BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780685|ref|YP_003065098.1| flagellar basal body rod
protein FlgF [Candidatus Liberibacter asiaticus str. psy62]
         (243 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done



>gi|222100099|ref|YP_002534667.1| Flagellar basal-body rod protein FlgG [Thermotoga neapolitana DSM
           4359]
 gi|221572489|gb|ACM23301.1| Flagellar basal-body rod protein FlgG [Thermotoga neapolitana DSM
           4359]
          Length = 268

 Score =  198 bits (504), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 53/258 (20%), Positives = 102/258 (39%), Gaps = 19/258 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S         A + +L T+A+N++N DT G++ ++ +F +++     +         
Sbjct: 8   MMISLYSAATGMSAQQFKLDTIANNLANVDTTGYKKVRAEFQDLLYQYVKNAGTPTAATS 67

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRF 106
                      V +        +G+F  TG  LD A+ GD +F ++     I  TRDG F
Sbjct: 68  TLPTGLYVGHGVRTAATTRIFTLGNFEQTGNALDLAIAGDGFFQIQLQDGRIAYTRDGSF 127

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           KV  +G +V+++G   V ++      +        +          + + T+ L      
Sbjct: 128 KVDSEGRIVTSNGLLLVPEITIPENAVSINVSPDGIVSAELQDGTIQQLGTITLVRFVNP 187

Query: 167 QGFVRRENSGI-SPNIPPTPLE----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221
            G     ++   +      P+E          +K+GFLE SN + + EM  MI   + + 
Sbjct: 188 SGLKSIGDNLYIATPASGDPIEGVPGQDGFGAIKQGFLEKSNVDVVREMVDMITAQRAYE 247

Query: 222 SITTLIDENEKSMLEAIR 239
             + +I   ++ +  A  
Sbjct: 248 FNSRVIQTADEMLRTATN 265


>gi|170288994|ref|YP_001739232.1| flagellar basal-body rod protein FlgG [Thermotoga sp. RQ2]
 gi|170176497|gb|ACB09549.1| flagellar basal-body rod protein FlgG [Thermotoga sp. RQ2]
          Length = 261

 Score =  198 bits (502), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 52/258 (20%), Positives = 102/258 (39%), Gaps = 19/258 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S         A + +L T+A+N++N DT G++ ++ +F +++     +         
Sbjct: 1   MMISLYSAATGMSAQQFKLDTIANNLANVDTTGYKKVRAEFQDLLYQYVKNAGTPTAATS 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRF 106
                      V +        +G+F  TG  LD A+ GD +F ++     I  TRDG F
Sbjct: 61  SLPTGLYVGHGVRTAATTRIFTLGNFEQTGNALDLAIAGDGFFQIQLQDGRIAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           K+  +G +V+++G   V ++      +        +          + + T+ L      
Sbjct: 121 KIDSEGRIVTSNGLLLVPEITIPENAVSINVSPDGIVSAELQDGTIQELGTITLVRFVNP 180

Query: 167 QGFVRRENSGI-SPNIPPTPLE----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221
            G     ++   +      P+E          +K+GFLE SN + + EM  MI   + + 
Sbjct: 181 SGLKSIGDNLYIATPASGDPIEGVPGQDGFGAIKQGFLEKSNVDVVREMVDMITAQRAYE 240

Query: 222 SITTLIDENEKSMLEAIR 239
             + +I   ++ +  A  
Sbjct: 241 FNSRVIQTADEMLRTATN 258


>gi|15644290|ref|NP_229342.1| flagellar basal-body rod protein FlgG [Thermotoga maritima MSB8]
 gi|148270380|ref|YP_001244840.1| flagellar basal-body rod protein FlgG [Thermotoga petrophila RKU-1]
 gi|281412686|ref|YP_003346765.1| flagellar basal-body rod protein FlgG [Thermotoga naphthophila
           RKU-10]
 gi|4982109|gb|AAD36609.1|AE001800_19 flagellar basal-body rod protein FlgG [Thermotoga maritima MSB8]
 gi|147735924|gb|ABQ47264.1| flagellar basal-body rod protein FlgG [Thermotoga petrophila RKU-1]
 gi|281373789|gb|ADA67351.1| flagellar basal-body rod protein FlgG [Thermotoga naphthophila
           RKU-10]
          Length = 261

 Score =  197 bits (499), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 52/258 (20%), Positives = 102/258 (39%), Gaps = 19/258 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S         A + +L T+A+N++N DT G++ ++ +F +++     +         
Sbjct: 1   MMISLYSAATGMSAQQFKLDTIANNLANVDTTGYKKVRAEFQDLLYQYVKNAGTPTAATS 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRF 106
                      V +        +G+F  TG  LD A+ GD +F ++     I  TRDG F
Sbjct: 61  SLPTGLYVGHGVRTAATTRIFTLGNFEQTGNALDLAIAGDGFFQIQLQDGRIAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           K+  +G +V+++G   V ++      +        +          + + T+ L      
Sbjct: 121 KMDSEGRIVTSNGLLLVPEITIPENAVSINVSPDGIVSAELQDGTIQELGTITLVRFVNP 180

Query: 167 QGFVRRENSGI-SPNIPPTPLE----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221
            G     ++   +      P+E          +K+GFLE SN + + EM  MI   + + 
Sbjct: 181 SGLKSIGDNLYIATPASGDPIEGVPGQDGFGAIKQGFLEKSNVDVVREMVDMITAQRAYE 240

Query: 222 SITTLIDENEKSMLEAIR 239
             + +I   ++ +  A  
Sbjct: 241 FNSRVIQTADEMLRTATN 258


>gi|39998143|ref|NP_954094.1| flagellar basal-body rod protein FlgG [Geobacter sulfurreducens
           PCA]
 gi|39985089|gb|AAR36444.1| flagellar basal-body rod protein FlgG [Geobacter sulfurreducens
           PCA]
          Length = 242

 Score =  195 bits (495), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 55/245 (22%), Positives = 102/245 (41%), Gaps = 8/245 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA---IKNDIDQKIS 57
           M +     L+  +A  +RL  +++N++N +T GF+  ++ F  ++ A   +         
Sbjct: 1   MNSGIYSALSGNIAAMKRLDVLSNNLANVNTPGFKKDRMTFESLLQAAGKVPQAGTTDAP 60

Query: 58  FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSA 117
             +    +     GS   TG   D A++GD +F + +P G   TR G FK+   G LV+A
Sbjct: 61  VYSETAFFTDHSRGSVSQTGNTFDLAIDGDGFFVVNTPEGKAYTRQGNFKLDATGKLVTA 120

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177
            G             I        +  +GEI   G  + T+ +          +  N+  
Sbjct: 121 DGYEVSGGGP-----IVINGSRVEINARGEILVDGSPVGTLEVVDFPKPYALQKNGNALF 175

Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
            P  P    + + G  V++G+LE SN +++ EM Q+I   + F   +  +   +    +A
Sbjct: 176 VPTDPQAVPQPVQGEPVRQGYLELSNVSAIQEMVQLIETQRFFEMCSKAVKAYDDMAGKA 235

Query: 238 IRNIA 242
              + 
Sbjct: 236 ANEVG 240


>gi|298507080|gb|ADI85803.1| flagellar basal body rod protein FlgF [Geobacter sulfurreducens
           KN400]
          Length = 242

 Score =  194 bits (493), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 56/245 (22%), Positives = 101/245 (41%), Gaps = 8/245 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA---IKNDIDQKIS 57
           M +     L+  +A  +RL  +++N++N +T GF+  ++ F  ++ A   +         
Sbjct: 1   MNSGIYSALSGNIAAMKRLDVLSNNLANVNTPGFKKDRMTFESLLQAAGKVPQAGTTDAP 60

Query: 58  FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSA 117
             +    +     GS   TG   D A++GD +F + +P G   TR G FK+   G LV+A
Sbjct: 61  VYSETAFFTDHSRGSVSQTGNTFDLAIDGDGFFVVNTPEGKAYTRQGNFKLDATGKLVTA 120

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177
            G             I        +  +GEI   G  + T+ +          +  N+  
Sbjct: 121 DGYEVSGGGP-----IVINGSRVEINARGEILVDGSPVGTLEVVDFPKPYALQKNGNALF 175

Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
            P  P    + + G  V++G LE SN +++ EM Q+I   + F   +  I   +    +A
Sbjct: 176 VPTDPQAVPQPVQGEPVRQGHLEYSNVSAIQEMVQLIETQRFFEMCSKAIKAYDDMAGKA 235

Query: 238 IRNIA 242
              + 
Sbjct: 236 ANEVG 240


>gi|289523332|ref|ZP_06440186.1| flagellar basal-body rod protein FlgG [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
 gi|289503024|gb|EFD24188.1| flagellar basal-body rod protein FlgG [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
          Length = 262

 Score =  192 bits (488), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 50/262 (19%), Positives = 96/262 (36%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +   G    +A +  L  +++N++N +T G++ I+ +F +++  I  +         
Sbjct: 1   MIRALWSGATGMIAQQSNLDVISNNLANVNTTGYKKIRAEFEDLIYQIGREPGAPVEPDS 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q                G+   T    D A+EGD +F +  P G    TRDG +
Sbjct: 61  MIPTGVQVGLGTRLIGTSRIMSPGNLQVTDNPFDIAIEGDGFFQVTLPDGTMAYTRDGTW 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
            V  DG +V+++G      +A     +         V  +     +   I  + L     
Sbjct: 121 HVDGDGQIVTSNGYLLEPQIAIPEDTVEITVSPTGEVYARQAGDVEPDEIGQIELARFVN 180

Query: 166 SQGFVRRENSGI-SPNIPPTP----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
            QG      +          P      +    T+++G LE SN   + EM  MI   + +
Sbjct: 181 PQGLRAMGKNLFLETPASGFPILGQPGEEGFGTLRQGALEMSNVQVVEEMVSMIVSQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNIA 242
            + +  I   ++ + +   N+ 
Sbjct: 241 EANSKTIQTADELL-QIANNLR 261


>gi|319790434|ref|YP_004152067.1| flagellar basal-body rod protein FlgG [Thermovibrio ammonificans
           HB-1]
 gi|317114936|gb|ADU97426.1| flagellar basal-body rod protein FlgG [Thermovibrio ammonificans
           HB-1]
          Length = 266

 Score =  192 bits (487), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 55/264 (20%), Positives = 96/264 (36%), Gaps = 26/264 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +     +   A +  L  +++N++N +TVGF+  +  F +++     D         
Sbjct: 1   MLRALWTSASGMEAQQTNLDVISNNIANVNTVGFKRSRANFEDLMYQDIRDPGVMSSEEN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP-RGIILTRDGRF 106
                 Q    V           GS I T   LD A++G  +F +E P  G   TR G F
Sbjct: 61  RVPTGIQIGLGVKLSDVSKIFTQGSLIKTDKPLDVAIQGPGFFKIELPGGGEAYTRAGDF 120

Query: 107 KVTDDGSLVSASGK------YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           ++ ++G +V+  G               V I I    +++ V   G   Q  +   T+ L
Sbjct: 121 QLDNEGYIVTPEGYRLSPNIQISAPETVVNISISPNGKVYVVRNTGG-QQVTEEAGTIKL 179

Query: 161 YSVDMSQGFVRRENSGISPN-IPPTPLE----DLSGVTVKRGFLEDSNANSMYEMGQMIH 215
           Y      G      +          P+E          + +GFLE SN N + EM  +I 
Sbjct: 180 YRFINPAGLKAIGGNLFVQTEASGEPIEGDPNTDGFGKLTQGFLEASNVNIVEEMVNLIV 239

Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239
             + +   +  I   ++ +     
Sbjct: 240 AQRAYEINSKGIIAADEMLRTVAS 263


>gi|225850285|ref|YP_002730519.1| flagellar basal-body rod protein FlgG [Persephonella marina EX-H1]
 gi|225645911|gb|ACO04097.1| flagellar basal-body rod protein FlgG [Persephonella marina EX-H1]
          Length = 266

 Score =  192 bits (486), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 54/261 (20%), Positives = 97/261 (37%), Gaps = 26/261 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +     +   A +  L  +++N++N +TVGF+  +  F +++     D         
Sbjct: 1   MIRALWTSASGMGAQQTNLDVISNNIANVNTVGFKRSRANFEDLIYQDIKDPGVMSSNET 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP-RGIILTRDGRF 106
                 Q    V           GS I T   LD A++GD +F +E P  G   TR G F
Sbjct: 61  RVPSGIQIGLGVKLSDVSKIFTQGSLIKTDKPLDIAIQGDGFFKIELPGGGEAYTRAGNF 120

Query: 107 KVTDDGSLVSASGK------YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           ++ ++G +V+ +G               V I I    +++ V  +G      ++     L
Sbjct: 121 QIDNEGYIVTPNGYRLSPNIQISAPETLVSISISPNGKVYVVRNEGGQQTTEELTDIK-L 179

Query: 161 YSVDMSQGFVRRENSGI-SPNIPPTPLE----DLSGVTVKRGFLEDSNANSMYEMGQMIH 215
           Y      G      +          P+E          + +GFLE SN N + EM  +I 
Sbjct: 180 YKFINPAGLKAIGENLFKYTEASGEPIEGDPNTDGFGKLAQGFLEASNVNIVEEMVNLIV 239

Query: 216 LTQKFNSITTLIDENEKSMLE 236
             + +   +  I   ++ +  
Sbjct: 240 AQRAYEINSKGIITADEMLRT 260


>gi|325295399|ref|YP_004281913.1| flagellar basal-body rod protein FlgG [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325065847|gb|ADY73854.1| flagellar basal-body rod protein FlgG [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 266

 Score =  192 bits (486), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 53/260 (20%), Positives = 97/260 (37%), Gaps = 26/260 (10%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +         A +  L  ++ N++N +TVGF+  +  F +++     D         
Sbjct: 1   MLRALWTSATGMEAQQTNLDVISHNIANVNTVGFKKSRANFEDLIYQDIRDPGVMSSEEN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP-RGIILTRDGRF 106
                 Q    V           GS + T   LD A++G  +F +E P  G   TR G F
Sbjct: 61  RVPSGIQIGLGVKVSDVSKIFTQGSLMKTDKPLDLAIQGAGFFKIELPGGGEAYTRAGNF 120

Query: 107 KVTDDGSLVSASGK------YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           ++ ++G +V+  G               V I I    +++ V   G +    + + T+ L
Sbjct: 121 QLNEEGYIVTPEGYKLSPNIQISSPETVVNISISPNGKVYVVRNTGGVQ-TTEEVGTIKL 179

Query: 161 YSVDMSQGFVRRENSGIS-PNIPPTPLE----DLSGVTVKRGFLEDSNANSMYEMGQMIH 215
           Y      G      + +   +    P+E          + +GFLE SN N + EM  +I 
Sbjct: 180 YRFINPAGLKALGGNLLVKTDASGEPVEGDPNTDGFGKLAQGFLEASNVNIVEEMVNLIV 239

Query: 216 LTQKFNSITTLIDENEKSML 235
             + +   +  I   ++ + 
Sbjct: 240 AQRAYEVNSKGITTADEMLR 259


>gi|148266117|ref|YP_001232823.1| flagellar basal body rod protein [Geobacter uraniireducens Rf4]
 gi|146399617|gb|ABQ28250.1| flagellar basal body rod protein [Geobacter uraniireducens Rf4]
          Length = 244

 Score =  190 bits (481), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 63/247 (25%), Positives = 107/247 (43%), Gaps = 10/247 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56
           M +     L+  LA  QRL  +++N++N +T GF+  +++F  V+   KN          
Sbjct: 1   MNSGLYAALSGSLAAMQRLEVISNNLANANTPGFKGDRLQFESVLANTKNPTLTAGNLTD 60

Query: 57  -SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115
               +  K + +   G    TG  LD AL+GD +F + +P+G   TR G F+    G LV
Sbjct: 61  LPVFSGEKFFTNYSAGPLKQTGNTLDVALDGDGFFVVNTPQGKAYTRQGSFQRDASGKLV 120

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
           +  G             I       ++  KG +   G  + T+ +          +  N 
Sbjct: 121 TGDGYEVQGRGP-----ITITGGRVDINGKGGVLVDGVSVGTLEVVDFPKPYALEKIGNG 175

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
              P  P    + ++  +VK+GFLEDSN N + EM +MI  ++ F+S   +I   +    
Sbjct: 176 LFIPADPQVAPQAVTTASVKQGFLEDSNVNVVTEMARMIETSRYFDSCQKVIRSYDDVAA 235

Query: 236 EAIRNIA 242
           +A   + 
Sbjct: 236 KAANELG 242


>gi|46578928|ref|YP_009736.1| flagellar basal body rod protein FlgG [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120603471|ref|YP_967871.1| flagellar basal body rod protein FlgG [Desulfovibrio vulgaris DP4]
 gi|46448340|gb|AAS94995.1| flagellar basal-body rod protein FlgG [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120563700|gb|ABM29444.1| flagellar basal-body rod protein FlgG [Desulfovibrio vulgaris DP4]
 gi|311232786|gb|ADP85640.1| flagellar basal-body rod protein FlgG [Desulfovibrio vulgaris RCH1]
          Length = 260

 Score =  188 bits (477), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 49/257 (19%), Positives = 95/257 (36%), Gaps = 18/257 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S        +A +  +  ++ N++N +T GF+  + +F +++               
Sbjct: 1   MMRSLWTAATGMVAQQLNIDVISHNLANVNTSGFKKSRAEFEDLMYQNMRIAGSATEGDS 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107
                 Q    V     +     G F ++G  LD A+EGD +F +        TR G FK
Sbjct: 61  RIPVGIQVGMGVRPTAVHKFFSQGDFQNSGNPLDIAIEGDGFFQVLVNGEPRYTRAGAFK 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           +  DG++V+A+G     +                     + + +    A + LY+     
Sbjct: 121 LNQDGTVVTANGYVLQPEFTVPAETKNVVVTEAGHIAALDANGQELAAADIPLYTFINPA 180

Query: 168 GFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222
           G      +   P+       +      +  T+ +GFLE SN   + EM  MI   + +  
Sbjct: 181 GLDAIGRNLYVPSEASGEAVEGVPGEDNVGTLAQGFLEMSNVEVVDEMVNMIVGQRAYEM 240

Query: 223 ITTLIDENEKSMLEAIR 239
            +  I  +++ +  A+ 
Sbjct: 241 NSKAISTSDQMLQTAVN 257


>gi|152990359|ref|YP_001356081.1| flagellar basal-body rod protein FlgG [Nitratiruptor sp. SB155-2]
 gi|151422220|dbj|BAF69724.1| flagellar basal-body rod protein FlgG [Nitratiruptor sp. SB155-2]
          Length = 266

 Score =  187 bits (474), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 51/264 (19%), Positives = 94/264 (35%), Gaps = 26/264 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +     +   A +  L  V++N++N +T GF+  +  F +++     D         
Sbjct: 1   MIRALWTSASGMQAQQTNLDVVSNNIANVNTTGFKQSRANFEDLIYQNIKDPGVENGNGN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP-RGIILTRDGRF 106
                 Q    V           GS   T  +LD A++G  +F +E P  G   TR G F
Sbjct: 61  RLPTGIQIGLGVRVADVAKIFSQGSLKHTERDLDVAIQGKGFFKIELPGGGEAYTRAGNF 120

Query: 107 KVTDDGSLVSASGKYP------VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           ++ ++G+LV+  G               V I I    ++  V  +G      + +  + L
Sbjct: 121 QIDNEGNLVTDQGYKVLPNIQINAPETLVGISISPNGKVVAVRSEGVGQ-TTEELGQLKL 179

Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIH 215
           Y      G      +    +       +          + +GFLE SN N + EM  +I 
Sbjct: 180 YRFINPAGLKAIGGNLFVQSEASAEPIEGDPDTNGFGKLSQGFLEMSNVNIVEEMVNLIV 239

Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239
             + +   +  I   ++ +     
Sbjct: 240 AQRAYEMNSKGITTADEMLRTVAT 263


>gi|289548898|ref|YP_003473886.1| flagellar basal-body rod protein FlgG [Thermocrinis albus DSM
           14484]
 gi|289182515|gb|ADC89759.1| flagellar basal-body rod protein FlgG [Thermocrinis albus DSM
           14484]
          Length = 262

 Score =  187 bits (474), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 52/259 (20%), Positives = 94/259 (36%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +     +   A +  L  ++ NM+N +TVGF+ ++  F +++     D         
Sbjct: 1   MFRALWTSASGMSAQQTNLDVISHNMANVNTVGFKKMRPTFQDLLYQTVRDPGAPTSPTT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q    V     Y     G+   TG +LD A++GD +F +  P   I  TR+G+F
Sbjct: 61  RAPSGFQIGLGVYISDTYGIFTQGNLFQTGNQLDLAIQGDGFFKVVLPDGTIAYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQKGKVIATMGLYSVDM 165
           ++  DG +V+  G     ++      I                +   + I  + L     
Sbjct: 121 RLDADGRIVNPDGYPLDPEITVPADAISVSIGPDGTVSVLRQGATTVEEIGRIELAKFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G  R  N+              +       T+ +G+LE SN N + EM  +I   + F
Sbjct: 181 PAGLRRIGNNLFIQTDASGEPIVDNPGNQGLGTLLQGYLESSNVNIVEEMVNLIIAQRAF 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  I   +  + +   
Sbjct: 241 EFNSKGIMAADDMLGQVAN 259


>gi|254478136|ref|ZP_05091519.1| conserved domain protein [Carboxydibrachium pacificum DSM 12653]
 gi|214035998|gb|EEB76689.1| conserved domain protein [Carboxydibrachium pacificum DSM 12653]
          Length = 251

 Score =  186 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 55/253 (21%), Positives = 107/253 (42%), Gaps = 15/253 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG-----------AIK 49
           M        +  LA  + +  +A+N++N +TVG++   V  S                  
Sbjct: 1   MIRGLYTAASGMLAQTKVMDVLANNLANVNTVGYKKDVVVLSSFPNFETIREGGDNVPPD 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109
             + +    V     +   E G  + T  +LDFA++G+ +F + +P+G   TRDG F + 
Sbjct: 61  RKVGRIEYGVLIDTFHTVFEEGPLMETTGKLDFAIDGNGFFVVNTPQGERYTRDGAFTMN 120

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169
            DG LV+  G   +         I       +V E G I   G+++  + +   D     
Sbjct: 121 ADGYLVTKDGYLVL----GENGPIRLSQGDVSVDENGNIINNGQLVDRLRIVDFDNYDAL 176

Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
            ++ ++    +         +   +K+GFLE SN NS+ EM  MI + + + S   ++  
Sbjct: 177 KKQGDNLFYLDNAVNTQIIPATGRIKQGFLEGSNVNSVKEMVNMISVMRNYESNQKVVTA 236

Query: 230 NEKSMLEAIRNIA 242
            ++++ +A+  + 
Sbjct: 237 FDETLGKAVNEVG 249


>gi|218778846|ref|YP_002430164.1| flagellar basal body rod protein FlgG [Desulfatibacillum
           alkenivorans AK-01]
 gi|218760230|gb|ACL02696.1| Flagellar basal-body rod protein FlgG [Desulfatibacillum
           alkenivorans AK-01]
          Length = 260

 Score =  186 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 45/257 (17%), Positives = 88/257 (34%), Gaps = 18/257 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M            A +  +  V++N++N +T  F+  +  F +++               
Sbjct: 1   MLRGLWTAATGMEAQQLNIDVVSNNLANINTTAFKRSRPDFQDLMYQTIRVAGATTTGGT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107
                 Q                G +  TG +LD+A+EG+ +F + S    + TR G FK
Sbjct: 61  QLPTGLQVGMGSKPTGVQKIFVQGDYSQTGNDLDWAIEGNGFFKVLSNNEEVYTRAGSFK 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           +  +G + +A+G+    + A     +    +          + +      + LY      
Sbjct: 121 IDSEGYITTAAGERLQPEFAVPADAVLISVDSGGKLTAFGPANEEVATYDITLYDFANPA 180

Query: 168 GFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222
           G      +            +         T+ +GFLE SN N + EM  MI   + + +
Sbjct: 181 GLYSMGRNLYKTTEASGEEVEGTPGDEGFGTISQGFLEMSNVNVVEEMVTMIIAQRAYEA 240

Query: 223 ITTLIDENEKSMLEAIR 239
            +  I   +  +  A  
Sbjct: 241 NSKAIQTADSMLQIANN 257


>gi|302343757|ref|YP_003808286.1| flagellar basal-body rod protein FlgG [Desulfarculus baarsii DSM
           2075]
 gi|301640370|gb|ADK85692.1| flagellar basal-body rod protein FlgG [Desulfarculus baarsii DSM
           2075]
          Length = 260

 Score =  186 bits (472), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 47/255 (18%), Positives = 93/255 (36%), Gaps = 18/255 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S         A +  L  +++N++N +T GF+  +  F +++               
Sbjct: 1   MMRSLYTAATGMTAQQLNLDVISNNLANVNTTGFKKSRADFEDLMYQTLRQPGAQQAGGQ 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107
                 Q    V           G +  T  +LD A+EG  +F ++     + TRDG FK
Sbjct: 61  MIPTGKQVGMGVRPVAIQKIWSQGDYQQTDNQLDVAIEGQGFFRIQKDNEDVYTRDGSFK 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           + ++  +V ++G   V  M           +   +        +   +  + LY+     
Sbjct: 121 LNNNRDIVDSNGNLLVPQMTVPENATSVVIDPNGLVTALTADDEAVELGRIQLYTFPNPS 180

Query: 168 GFVRRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222
           G +    +    +       P         T+ +GFLE SN + + EM  MI   + + +
Sbjct: 181 GLMAIGRNYFRESPASGVAVPGDPGADQFGTLAQGFLEMSNVSVVDEMVNMIVAQRAYEA 240

Query: 223 ITTLIDENEKSMLEA 237
            +  I  +++ +  A
Sbjct: 241 NSKSITTSDQMLQTA 255


>gi|302390533|ref|YP_003826354.1| flagellar basal-body rod protein FlgG [Thermosediminibacter oceani
           DSM 16646]
 gi|302201161|gb|ADL08731.1| flagellar basal-body rod protein FlgG [Thermosediminibacter oceani
           DSM 16646]
          Length = 268

 Score =  186 bits (472), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 63/269 (23%), Positives = 110/269 (40%), Gaps = 29/269 (10%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +     +  LA +  +  +++N++N +T G++  +V+F +++       D       
Sbjct: 1   MMRALWSASSGMLAQQLNVDVISNNLANVNTTGYKKSRVEFKDLLYETLRRPDVFQPGQG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFK 107
                Q    V           G+   TG   D A+EG+ +F +E P G    TRDG FK
Sbjct: 61  NPVGLQVGHGVRPASTTRFFTEGNLQQTGNTFDLAIEGEGFFVVERPDGSRAFTRDGSFK 120

Query: 108 VTDDG---SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG-----KVIATMG 159
           V+ DG    LV++ G Y  LD     I IP+     N+   G I+ +      + I T+ 
Sbjct: 121 VSIDGDDRYLVTSEGYYV-LDTDEDYISIPEDLTDINISANGTITGRDADGNIEEIGTIA 179

Query: 160 LYSVDMSQGFVRRENSGISPNIPPTPLE------DLSGVTVKRGFLEDSNANSMYEMGQM 213
           L      +G +   N+           +      +    T+ +GFLE SN   + EM  +
Sbjct: 180 LARFLNPEGLLAVGNNLFEQTAASGEYQLKEDPNEPGFGTILQGFLEMSNVQVVDEMVNL 239

Query: 214 IHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           I   + +   T  I   ++ + +A  N+ 
Sbjct: 240 IVAQRAYEINTKAIQTADEMLGQA-NNLR 267


>gi|188997557|ref|YP_001931808.1| flagellar basal-body rod protein FlgG [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|188932624|gb|ACD67254.1| flagellar basal-body rod protein FlgG [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 266

 Score =  186 bits (472), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 52/268 (19%), Positives = 99/268 (36%), Gaps = 27/268 (10%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +     +   A +  L  ++ N++N +TVGF+  +  F +++     D         
Sbjct: 1   MLRALWTSASGMEAQQTNLDVISHNIANVNTVGFKRSRANFEDLIYQDVRDPGVLSSTQN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q    V           GS + T   LD A++G+ +F +E P      TR G F
Sbjct: 61  RVPAGIQIGLGVKVSDVAKMFSQGSLMKTDNPLDVAIQGEGFFKIEMPDGSEAFTRAGNF 120

Query: 107 KVTDDGSLVSASGK------YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           ++ ++G +V+  G               + I I    ++  V   G   Q  + +  + L
Sbjct: 121 QIDNEGYIVNPEGYRLSPNIQISAPETVLNISISPNGKVIVVRNSGG-QQTTEEVGNIKL 179

Query: 161 YSVDMSQGFVRRENSGI-SPNIPPTPLE----DLSGVTVKRGFLEDSNANSMYEMGQMIH 215
           Y      G      +          P+E      +   + +GFLE SN N + EM  +I 
Sbjct: 180 YKFINPAGLKAIGGNLFKYTEASGQPIEGDPNTDAFGKLTQGFLEMSNVNIVEEMVNLIV 239

Query: 216 LTQKFNSITTLIDENEKSMLEAIRNIAS 243
             + +   +  I   ++ + + +  + S
Sbjct: 240 AQRAYEVNSKGIITADEML-KTVSTLKS 266


>gi|94987183|ref|YP_595116.1| flagellar basal body rod protein FlgG [Lawsonia intracellularis
           PHE/MN1-00]
 gi|94731432|emb|CAJ54795.1| Flagellar basal body L-ring protein [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 261

 Score =  186 bits (471), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 53/257 (20%), Positives = 100/257 (38%), Gaps = 18/257 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S        +A +  +  +++N++NT+T GF+  + +F +++               
Sbjct: 1   MMRSLWTAATGMVAQQLNIDVISNNLANTNTSGFKKSRAEFEDLMYQTMKIAGSATDGDN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107
                 Q    V     +     G F +TG  LD A+EG+ +F +     ++ TR G FK
Sbjct: 61  RIPVGIQVGMGVRPTAVHKFFTQGDFQNTGNPLDMAIEGEGFFQVLVGDQLMYTRAGAFK 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           +  DG+LV+A+G     +    P                + + +      + LYS     
Sbjct: 121 LNQDGTLVTANGYPLQPEFTVPPDAKSVAISERGRITALDANGQEIAAGEIPLYSFVNPA 180

Query: 168 GFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222
           G   +  +   P        +      +  T+ +GFLE SN   + EM QMI   + +  
Sbjct: 181 GLDAKGRNLYIPTEASGEAVEGVPGEENLGTIAQGFLEMSNVEVVDEMVQMIVGQRAYEM 240

Query: 223 ITTLIDENEKSMLEAIR 239
            +  I  ++  +  A++
Sbjct: 241 NSKAIQTSDNMLQTAVQ 257


>gi|15606190|ref|NP_213567.1| flagellar hook basal-body protein FlgG [Aquifex aeolicus VF5]
 gi|2983377|gb|AAC06963.1| flagellar hook basal-body protein FlgG [Aquifex aeolicus VF5]
          Length = 262

 Score =  186 bits (471), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 47/259 (18%), Positives = 96/259 (37%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +     +   A +  L  ++ NM+N +TVG++ ++  F +++     +         
Sbjct: 1   MFRALWTSASGMTAQQTNLDVISHNMANVNTVGYKKMRATFQDLLYQTVEEPGAPTSPTT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q          Y     G+   T  +LD A++GD +F +  P   I  TR+G+F
Sbjct: 61  RSPSGFQIGLGTYVSDTYGIFTQGNLTKTDNQLDIAIQGDGFFKIVLPDGTIAYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQKGKVIATMGLYSVDM 165
           ++  +G +V++ G     ++      I                + + + +  + L     
Sbjct: 121 RLDSEGRIVNSDGYPLDPEITIPADAISVSIAADGTVSVLRQGATEVEEVGRIELAKFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G  R  N+              +       T+ +G+LE SN N + EM  +I   + +
Sbjct: 181 PAGLRRIGNNLYIQTTASGEPIIDNPGNQGLGTLLQGYLESSNVNIVEEMVNLIIAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              T  I   ++ + +A  
Sbjct: 241 EFNTKGIQAADEMLSQAAN 259


>gi|20806698|ref|NP_621869.1| flagellar basal body and hook proteins [Thermoanaerobacter
           tengcongensis MB4]
 gi|20515152|gb|AAM23473.1| Flagellar basal body and hook proteins [Thermoanaerobacter
           tengcongensis MB4]
          Length = 251

 Score =  186 bits (471), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 55/253 (21%), Positives = 107/253 (42%), Gaps = 15/253 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG-----------AIK 49
           M        +  LA  + +  +A+N++N +TVG++   V  S                  
Sbjct: 1   MIRGLYTAASGMLAQTKVMDVLANNLANANTVGYKKDIVVLSSFPNLETIREGGDNVPPD 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109
             + +    V     +   E G  + T  +LDFA++G+ +F + +P+G   TRDG F + 
Sbjct: 61  RKVGRIEYGVLIDTFHTVFEEGPLMETTGKLDFAIDGNGFFVVNTPQGERYTRDGAFTMN 120

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169
            DG LV+  G   +         I       +V E G I   G+++  + +   D     
Sbjct: 121 ADGYLVTKDGYIVL----GENGPIRLSQGDVSVDENGNIINNGQLVDRLRIVDFDNYDAL 176

Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
            ++ ++    +         +   +K+GFLE SN NS+ EM  MI + + + S   ++  
Sbjct: 177 RKQGDNLFYLDNAVNTQIIPATGRIKQGFLEGSNVNSVKEMVNMISVMRNYESNQKVVTA 236

Query: 230 NEKSMLEAIRNIA 242
            ++++ +A+  + 
Sbjct: 237 FDETLGKAVNEVG 249


>gi|242278484|ref|YP_002990613.1| flagellar basal body rod protein FlgG [Desulfovibrio salexigens DSM
           2638]
 gi|242121378|gb|ACS79074.1| flagellar basal-body rod protein FlgG [Desulfovibrio salexigens DSM
           2638]
          Length = 260

 Score =  185 bits (470), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 49/257 (19%), Positives = 94/257 (36%), Gaps = 18/257 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S        +A +  +  +++N++N +T GF+  +V+F +++               
Sbjct: 1   MMRSLWTAATGMVAQQTHIDVLSNNLANVNTQGFKKSRVEFEDLMYQTMRIAGSETEGGN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107
                 Q    V     +     GSF STG  LD A+EG+ +F ++       TR G FK
Sbjct: 61  RLPTGMQIGMGVKEVSIHKFFSQGSFESTGNPLDIAIEGNGFFLVDRNGEDAYTRSGAFK 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           +  DG LV+++G     +       +             + +      A + +Y      
Sbjct: 121 LDSDGRLVTSNGYPLQPEFTVPAEAVNVVVSEDGHIAALDKNGTELSSADITIYDFINEA 180

Query: 168 GFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222
           G      +                   +  T+ +G+LE SN   + EM  +I   + + +
Sbjct: 181 GLNAVGKNLYVETEASGAAIQGTPGEDNFGTLAQGYLEGSNVELVDEMVGLIVGQRAYET 240

Query: 223 ITTLIDENEKSMLEAIR 239
            +  I  ++  +  AI 
Sbjct: 241 NSKAITTSDSMLQTAIN 257


>gi|237755437|ref|ZP_04584062.1| flagellar basal-body rod protein FlgG [Sulfurihydrogenibium
           yellowstonense SS-5]
 gi|237692401|gb|EEP61384.1| flagellar basal-body rod protein FlgG [Sulfurihydrogenibium
           yellowstonense SS-5]
          Length = 266

 Score =  185 bits (469), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 52/268 (19%), Positives = 98/268 (36%), Gaps = 27/268 (10%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +     +   A +  L  ++ N++N +TVGF+  +  F +++     D         
Sbjct: 1   MLRALWTSASGMEAQQTNLDVISHNIANVNTVGFKRSRANFEDLIYQDVRDPGVLSSTQN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q    V           GS + T   LD A++G+ +F +E P      TR G F
Sbjct: 61  RVPAGIQIGLGVKVSDVAKMFSQGSLMKTDNPLDVAIQGEGFFKIEMPDGSEAFTRAGNF 120

Query: 107 KVTDDGSLVSASGK------YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           ++ ++G +V+  G               + I I    ++  V   G   Q  + +  + L
Sbjct: 121 QLDNEGYIVNPEGYRLSPNIQISAPETVLNISISPNGKVIVVRNSGG-QQTTEEVGNIKL 179

Query: 161 YSVDMSQGFVRRENSGI-SPNIPPTPLE----DLSGVTVKRGFLEDSNANSMYEMGQMIH 215
           Y      G      +          P+E      +   + +GFLE SN N + EM  +I 
Sbjct: 180 YKFINPAGLKAIGGNLFKYTEASGQPIEGDPNTDAFGKLTQGFLEMSNVNIVEEMVNLIV 239

Query: 216 LTQKFNSITTLIDENEKSMLEAIRNIAS 243
             + +   +  I   ++ +   +  + S
Sbjct: 240 AQRAYEVNSKGIITADEML-RTVSTLKS 266


>gi|222053731|ref|YP_002536093.1| flagellar basal-body rod protein FlgF [Geobacter sp. FRC-32]
 gi|221563020|gb|ACM18992.1| flagellar basal-body rod protein FlgF [Geobacter sp. FRC-32]
          Length = 244

 Score =  184 bits (467), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 59/247 (23%), Positives = 105/247 (42%), Gaps = 10/247 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-----DQK 55
           M +     L+  LA  +RL  +++N++N +T GF+  +++F  V+ + K+          
Sbjct: 1   MNSGLYAALSGNLAAMRRLDVISNNLANANTAGFKGDRLQFESVLASSKSQSQAAASPND 60

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115
               +S   +     G    TG  LD AL+GD +F + +P+G   TR G F++   G LV
Sbjct: 61  SPVFSSEIFFTDYSPGPLKQTGNTLDVALDGDGFFVVNTPQGRAYTRQGNFRMDSAGRLV 120

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
           ++ G             I       ++  KG I   G    T+ +          +    
Sbjct: 121 TSEGYEVQGGGP-----ITVNGGRVDIDAKGAILVDGTPAGTLDIVDFQKPYALQKLGEG 175

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
              P  P     +++  TV++G LE SN N + EM +MI  T+ F S   ++   +    
Sbjct: 176 LFIPANPQETPVNVTTTTVQQGALEGSNVNVVAEMVRMIETTRYFESCQKVVRSYDDITG 235

Query: 236 EAIRNIA 242
           +A  ++ 
Sbjct: 236 KAANDLG 242


>gi|121534936|ref|ZP_01666755.1| flagellar basal-body rod protein FlgG [Thermosinus carboxydivorans
           Nor1]
 gi|121306535|gb|EAX47458.1| flagellar basal-body rod protein FlgG [Thermosinus carboxydivorans
           Nor1]
          Length = 262

 Score =  184 bits (467), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 84/259 (32%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +     +  +A +  +  +++N++N +T GF+  +  F +++               
Sbjct: 1   MMRALWTAGSGMVAQQANVDVISNNLANVNTTGFKKSRTDFQDLMYQTIRQAGAATGADT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q    V           G+F  TG  LD A+EGD +F +  P G    TRDG F
Sbjct: 61  QLPTGIQIGHGVRQVATQKIYTQGNFQQTGNPLDLAIEGDGFFQITLPDGTLAYTRDGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           K    G +V++ G      +                V  K       + +  + +     
Sbjct: 121 KKDAQGRIVTSEGYPLEPQIIIPENATELLISADGRVTAKIPGQTDPQDLGQIQIVRFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      + +                    T+ + +LE SN   + EM  MI   + +
Sbjct: 181 PAGLDSIGRNLLKETAASGAPVVLNPGTDGAGTLVQQYLEMSNVQVVEEMVNMIVAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
                 I   +  + +   
Sbjct: 241 EINAKAITTADDMLGQVAN 259


>gi|302392939|ref|YP_003828759.1| flagellar basal-body rod protein FlgG [Acetohalobium arabaticum DSM
           5501]
 gi|302205016|gb|ADL13694.1| flagellar basal-body rod protein FlgG [Acetohalobium arabaticum DSM
           5501]
          Length = 262

 Score =  184 bits (467), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 51/259 (19%), Positives = 93/259 (35%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S         A +  + T+++N++N +T GF+  +V F +++     +         
Sbjct: 1   MIRSLWTAATGMKAQQLNIDTISNNLANVNTNGFKKSRVNFQDLMYQSLREAGTPNNQGS 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                      V           GSF  TG  LD A+EGD +F +  P G +  TRDG F
Sbjct: 61  QVPAGIEVGHGVRPAATQKLFAQGSFQQTGNPLDMAIEGDGFFQVVRPNGQVGYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           K   +G +V++ G     D+                V  K   +++   +  + L     
Sbjct: 121 KRDSNGRIVTSDGYPLASDITIPEDTTDVSITAEGRVMVKQPGNEEVTEVGQIELSRFSN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +  +                   T+ +G+LE  N   + EM  MI   + +
Sbjct: 181 PAGLKSIGRNLFAETPASGGPTVGVPAEDGFGTISQGYLEKGNVKVVEEMTNMIAAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  I  +++ + +A  
Sbjct: 241 EVNSKAIKASDQMLQQANN 259


>gi|332981440|ref|YP_004462881.1| flagellar hook-basal body protein [Mahella australiensis 50-1 BON]
 gi|332699118|gb|AEE96059.1| flagellar hook-basal body protein [Mahella australiensis 50-1 BON]
          Length = 265

 Score =  184 bits (467), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 56/262 (21%), Positives = 96/262 (36%), Gaps = 23/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49
           M  S   G++   A + R+  + +N++N +TVGF++ +V F +V                
Sbjct: 1   MMRSMFSGVSGLRAHQTRMDVIGNNIANVNTVGFKSSRVTFQDVFNQTIKTGSAPNVLGG 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109
            +  Q     A G   +    G    T   LD A+ GD +F +        TR G F + 
Sbjct: 61  TNPQQIGLGAAVGAIDVLHTPGGIERTDNPLDLAINGDGFFVVNDGTADYYTRAGNFHLD 120

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG-----KVIATMGLYSVD 164
            DG+LV+  G Y         I  P       + + G+IS          +  +GL    
Sbjct: 121 ADGNLVTPDGMYVQTAGGGNIIIDPTLYVSIVIDKTGQISGIQADGTVDTLDIVGLAKFV 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-------SGVTVKRGFLEDSNANSMYEMGQMIHLT 217
              G  +   +     I   P               +  G LE SN +   E+  MI   
Sbjct: 181 NPGGLEKIGQNMYRETISSGPPATGIVQPGQDGTGYLTPGALEMSNVDLSRELTDMIITQ 240

Query: 218 QKFNSITTLIDENEKSMLEAIR 239
           + F + + +I  +++ + E + 
Sbjct: 241 RGFQANSRVITTSDEMLQELVN 262


>gi|311068150|ref|YP_003973073.1| flagellar basal body rod protein FlgG [Bacillus atrophaeus 1942]
 gi|310868667|gb|ADP32142.1| flagellar basal body rod protein FlgG [Bacillus atrophaeus 1942]
          Length = 264

 Score =  184 bits (467), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 62/262 (23%), Positives = 109/262 (41%), Gaps = 24/262 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G++     + +L  + +N++N +TVGF+  +V F ++V               
Sbjct: 1   MLRSLYSGISGMKNFQTKLDVIGNNIANVNTVGFKKSRVTFKDMVSQTIAGGSAAGAQVG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
             +  Q     ++G         +  STG  LD A++GD +F +++  G + TR G F +
Sbjct: 61  GTNSKQIGLGSSTGTIDTIHSTSATQSTGRTLDLAIDGDGYFQIDNGEGTVYTRAGNFYL 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-----IATMGLYSV 163
            ++G LV+  G Y         I IP+  + F +G  G +S  G          +G+ + 
Sbjct: 121 DNEGKLVTGDGYYVQKLG-GGEITIPKDAQNFTIGPDGSVSIVGAGGEKIDGGQIGIVTF 179

Query: 164 DMSQGFVRRENSGI------SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217
             S G  +  NS                  D     +K GFLE SN +   E  +MI   
Sbjct: 180 ANSDGLDKIGNSLYRESSNSGTPSAANIPGDGGTGELKSGFLEMSNVDLTDEFTEMIVAQ 239

Query: 218 QKFNSITTLIDENEKSMLEAIR 239
           + F S + +I  +++ + E + 
Sbjct: 240 RGFQSNSKIITTSDEILQELVN 261


>gi|303328380|ref|ZP_07358818.1| flagellar basal-body rod protein FlgG [Desulfovibrio sp. 3_1_syn3]
 gi|302861710|gb|EFL84646.1| flagellar basal-body rod protein FlgG [Desulfovibrio sp. 3_1_syn3]
          Length = 261

 Score =  184 bits (467), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 53/257 (20%), Positives = 101/257 (39%), Gaps = 18/257 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G    +A +  +  +++N++N +T GF+  + +F +++               
Sbjct: 1   MMRSLYTGATGMVAQQLNIDVISNNLANVNTTGFKKSRAEFEDLMYQTMKIAGSITEGDN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107
                 Q    V     +     G F +TG  LD A+EGD +F ++    ++ TR G FK
Sbjct: 61  RLPVGIQVGMGVRPTAVHKFFTQGDFQNTGNALDVAVEGDGFFQVDVNGELMYTRAGSFK 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           +  DG++V+A+G     + A                   +   +    A + LY+     
Sbjct: 121 LNQDGTVVTANGYILQPEFAVPAETKNISISSTGHIAALDSEGQEIAGAEIPLYTFINPA 180

Query: 168 GFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222
           G   R  +  +P        +      +  T+ +GFLE SN   + EM  MI   + +  
Sbjct: 181 GLDARGRNLYTPTEASGAETEGVPGTDNVGTLAQGFLEMSNVEVVDEMVNMIVGQRAYEV 240

Query: 223 ITTLIDENEKSMLEAIR 239
            +  I  ++  +  A++
Sbjct: 241 NSKAIQTSDSMLGMAVQ 257


>gi|220932494|ref|YP_002509402.1| flagellar basal-body rod protein FlgG [Halothermothrix orenii H
           168]
 gi|219993804|gb|ACL70407.1| flagellar basal-body rod protein FlgG [Halothermothrix orenii H
           168]
          Length = 262

 Score =  184 bits (466), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 87/259 (33%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +         A +  + T+++N++N +T GF+  +V F +++               
Sbjct: 1   MIGALWTAATGMDAQQTNIDTISNNLANVNTTGFKKTRVNFQDLMYQHIRQPGTPNSQGG 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                      V           G+  +T   LD  +EGD +  +  P G    TRDG  
Sbjct: 61  QIPVGIEVGHGVKVSATQKIFSPGNIQNTDNPLDILIEGDGFLQVLLPDGTLAYTRDGSL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           K    G +V++ G     ++                +  +   S + + I  + L     
Sbjct: 121 KRDSMGRIVTSDGYPIQPEIYIPEDASSISITSDGTIAVEINGSNQPQQIGQIELARFSN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +   P +                T+ +GFLE SN   + EM  MI   + +
Sbjct: 181 PAGLNSIGRNLFKPTVASGDPIVGTPGSPGFGTIAQGFLEMSNVKVVEEMVNMIAAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  I   ++ +  A +
Sbjct: 241 EINSKAIQAADEMLRTASQ 259


>gi|297616912|ref|YP_003702071.1| flagellar basal-body rod protein FlgG [Syntrophothermus lipocalidus
           DSM 12680]
 gi|297144749|gb|ADI01506.1| flagellar basal-body rod protein FlgG [Syntrophothermus lipocalidus
           DSM 12680]
          Length = 261

 Score =  184 bits (466), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 49/258 (18%), Positives = 93/258 (36%), Gaps = 19/258 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +         A +  +  +A N++N +T G++  +V+F +++  +            
Sbjct: 1   MLRALYTSSTGMFAQQLNIDNIAHNIANVNTTGYKKSRVEFQDLIYQMLRRPVANDTTVQ 60

Query: 56  ------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI--ILTRDGRFK 107
                    V           G+   T   LD A++G A+F ++SP     + TRDG FK
Sbjct: 61  PSGLWVGLGVKPSATQTIFSQGNLTPTDNPLDVAIQGQAFFRVQSPTNEEYLYTRDGSFK 120

Query: 108 VTDDGSLVSASGKYPVL-DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           +  +G+LV+  G Y V  D                V  K     +      + L      
Sbjct: 121 LDSEGNLVTTDGYYVVGVDTIDPEGYDVTIAPDGTVTYKMPGQDEPVEAGQVELAKFTNP 180

Query: 167 QGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221
            G  +   +   P            E  + V++  G+LE +N   + EM  +I   + + 
Sbjct: 181 AGLEKIGGNLYRPTASSGEAIDWDPEADTTVSLHAGYLEAANIQIVEEMVNLITAQRAYE 240

Query: 222 SITTLIDENEKSMLEAIR 239
             + +I   ++ +  A  
Sbjct: 241 INSKVIQSADEMLGMAAN 258


>gi|119953549|ref|YP_945759.1| flagellar basal body rod protein FlgG [Borrelia turicatae 91E135]
 gi|119862320|gb|AAX18088.1| flagellar basal-body rod protein FlgG [Borrelia turicatae 91E135]
          Length = 264

 Score =  184 bits (466), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 51/263 (19%), Positives = 97/263 (36%), Gaps = 23/263 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +     +   A +  + T+A+N+SN +T GF+ I+ +F +++   +           
Sbjct: 1   MMRALWTAASGMKAQQYNVDTIANNLSNVNTTGFKKIRAEFEDLIYQTQKRAGTPATEDT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                            +   E G+  +T  + D A+EGD ++ +  P G    TRDG F
Sbjct: 61  VSPLGNQVGHGTKVSATHRIFEQGNLQATNLKTDVAIEGDGFYKILLPDGTYGYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNV---GEKGEISQKGKVIATMGLYSV 163
           K+  +G LV++ G   + +++     I     I        K + S     +  M +   
Sbjct: 121 KIDANGDLVTSQGYKLLPEISFPEEYIKDSIIISQEGIISVKVDGSPDPIELGQMEIARF 180

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
               G     N+     I                 +++G LE SN +   EM  MI   +
Sbjct: 181 VNPAGLNAIGNNIFKETIGSGEEISGTPGSSGMGRLRQGILEMSNVSIAEEMVTMIVAQR 240

Query: 219 KFNSITTLIDENEKSMLEAIRNI 241
            +   +  I  ++  +     N+
Sbjct: 241 AYEINSKAIQTSDNMLG-IANNL 262


>gi|297570291|ref|YP_003691635.1| flagellar basal-body rod protein FlgG [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296926206|gb|ADH87016.1| flagellar basal-body rod protein FlgG [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 260

 Score =  184 bits (466), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 93/259 (35%), Gaps = 19/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +   G       + +L T+++N++N +T GF+  +V+F ++       +        
Sbjct: 1   MIRALYSGTTGMRGQQLQLDTISNNLANVNTAGFKKSRVQFEDLYYQEMRAVGVETVDGG 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107
                 Q    V +         GS   TG +LD A+EG  +F +        TR G F 
Sbjct: 61  QVPSGIQVGLGVIATSTQKLFTQGSIHETGNDLDLAVEGRGFFQVIRDGEEFYTRSGNFT 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
              DG +V+ +G     + A     +        + +    +Q+      + L++     
Sbjct: 121 RDADGFIVTQNGDRLQPEFAIPADTVTLSVGTDGLIQAKNAAQEIIAEGQLTLHNFINPG 180

Query: 168 GFVRRENSGISPN-IPPTPLEDLS----GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222
           G      +   P      P+E          + + F+E SN +   E+  +I   + F  
Sbjct: 181 GLRAEGGNLFRPTEASGDPIESDPGTDGAGVILQNFIEVSNVDVTEELVNLIITQRAFEM 240

Query: 223 ITTLIDENEKSMLEAIRNI 241
            +  +   ++ + E    +
Sbjct: 241 NSKSVQTADQLL-EVANTL 258


>gi|163782718|ref|ZP_02177714.1| flagellar hook basal-body protein FlgG [Hydrogenivirga sp.
           128-5-R1-1]
 gi|159881839|gb|EDP75347.1| flagellar hook basal-body protein FlgG [Hydrogenivirga sp.
           128-5-R1-1]
          Length = 262

 Score =  183 bits (465), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 49/259 (18%), Positives = 97/259 (37%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +     +   A +  L  ++ NM+N +T+GF+ ++  F +++     +         
Sbjct: 1   MFRALWTSASGMTAQQTNLDVISHNMANVNTIGFKKMRPTFQDLIYQTVREPGAPTSPTT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q          Y     G+   TG  LD A++GD +F +  P   I  TR+G+F
Sbjct: 61  RSPSGFQIGLGTYIADTYGIFTQGNINQTGNTLDLAIQGDGFFKVVLPDGTIAYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQKGKVIATMGLYSVDM 165
           ++  DG +V++ G     +++  P  +                +   + +  + L     
Sbjct: 121 RLDRDGRIVNSDGYPLDPEISIPPDALSIGIAADGTVTVLRQGATSVEEVGRIELAKFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G  R  N+              +       T+ +G+LE SN N + EM  +I   + +
Sbjct: 181 PAGLRRVGNNLYIQTDASGEPLIDNPGNQGIGTLLQGYLESSNVNIVEEMVNLIIAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              T  I   ++ + +A  
Sbjct: 241 EFNTKGITAADEMLSQAAN 259


>gi|297618421|ref|YP_003703580.1| flagellar basal-body rod protein FlgF [Syntrophothermus lipocalidus
           DSM 12680]
 gi|297146258|gb|ADI03015.1| flagellar basal-body rod protein FlgF [Syntrophothermus lipocalidus
           DSM 12680]
          Length = 256

 Score =  183 bits (465), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 54/261 (20%), Positives = 111/261 (42%), Gaps = 24/261 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKND------ 51
           M        +  L    +   +A+N++N  T GF+        F +++     +      
Sbjct: 1   MIRGLYTACSGMLLQLAKQDVIANNLANASTPGFKKDLAVCTAFPDMMINRLGEVKVVAG 60

Query: 52  ---------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTR 102
                    I +  +  A          G+   T   LD A+ GD +F +++P+G   TR
Sbjct: 61  KEEPIPPVAIGRLGTGAAIQTISTDFSAGAVQKTDNPLDLAIAGDGFFVIQTPQGEKYTR 120

Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162
           +G F++ DDG L +A G   +         I   D+ F + EKG +    +V+ T+ +  
Sbjct: 121 NGSFRIGDDGILTTAQGYPVL----GRSGPINIGDQTFTIDEKGNLLVGDEVLDTLRVVR 176

Query: 163 VDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222
            + +   V+  +     N   TP++      V +G+LE SN  ++ EM ++I + + + +
Sbjct: 177 FENNSELVKTGDDL-FTNPSGTPVDV-EDGQVIQGYLELSNVVAVKEMVELISVLRAYEA 234

Query: 223 ITTLIDENEKSMLEAIRNIAS 243
              ++  +++++  AI  + +
Sbjct: 235 NQKVVQAHDQTLDAAINRVGA 255


>gi|225849135|ref|YP_002729299.1| flagellar basal-body rod protein FlgG [Sulfurihydrogenibium
           azorense Az-Fu1]
 gi|225644492|gb|ACN99542.1| flagellar basal-body rod protein FlgG [Sulfurihydrogenibium
           azorense Az-Fu1]
          Length = 266

 Score =  183 bits (465), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 53/268 (19%), Positives = 97/268 (36%), Gaps = 27/268 (10%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +     +   A +  L  ++ N++N +TVGF+  +  F +++     D         
Sbjct: 1   MLRALWTSASGMEAQQTNLDVISHNIANVNTVGFKRSRANFEDLIYQDIRDPGVLSSTQN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q    V           GS I T   LD A++GD +F +E P      TR G F
Sbjct: 61  RVPAGIQIGLGVKVSDVAKIFSQGSLIKTDNPLDLAIQGDGFFKIEMPDGSEAFTRAGNF 120

Query: 107 KVTDDGSLVSASGK------YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           ++ ++G +V+  G               + I +    ++  V   G   Q  + +  + L
Sbjct: 121 QLDNEGYIVNPEGYRLSPNIQISAPETVINISVSPNGKVVVVRNSGG-QQTTEEVGDIKL 179

Query: 161 YSVDMSQGFVRRENSGI-SPNIPPTPLE----DLSGVTVKRGFLEDSNANSMYEMGQMIH 215
           Y      G      +          P+E          + +GFLE SN N + EM  +I 
Sbjct: 180 YRFMNQAGLKAIGQNLFKYTEASGEPIEGDPNTDGFGKITQGFLEASNVNIVEEMVNLIV 239

Query: 216 LTQKFNSITTLIDENEKSMLEAIRNIAS 243
             + +   +  I   ++ +   +  + S
Sbjct: 240 AQRAYEVNSKGIITADEML-RTVSTLKS 266


>gi|289577407|ref|YP_003476034.1| flagellar basal-body rod protein FlgG [Thermoanaerobacter italicus
           Ab9]
 gi|289527120|gb|ADD01472.1| flagellar basal-body rod protein FlgG [Thermoanaerobacter italicus
           Ab9]
          Length = 266

 Score =  183 bits (465), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 63/266 (23%), Positives = 109/266 (40%), Gaps = 25/266 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +     +   A +  +  +A+N++N +T  F+  + +F +++       +       
Sbjct: 1   MMRALWSAASGMTAQQLNVDVIANNLANVNTTAFKRDRAEFKDLIYQTLQRENIYGGQGR 60

Query: 54  ----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKV 108
               Q    V           GS   T   LD AL+G+ +FA+  P G    TRDG FK+
Sbjct: 61  PVNMQVGVGVRPSAIVKDFTEGSLQQTDNPLDLALDGEGFFAVLGPDGTVYYTRDGSFKL 120

Query: 109 TDDGSLVS--ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG-----KVIATMGLY 161
           + DG+ +    +  YPVLD    PI   + ++  +V   G IS K      + +AT+G+Y
Sbjct: 121 SADGNTLMLVTADGYPVLDDRGNPIVFDRTEKDISVSPLGVISVKNANGTTREVATLGIY 180

Query: 162 SVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
           +    QG +   N+   P             +     V +GFLE SN   + EM  MI  
Sbjct: 181 NFVNPQGLLSVGNNLYEPTEASGQPGTRDDFEGRMGKVMQGFLETSNVQVVKEMVDMIAA 240

Query: 217 TQKFNSITTLIDENEKSMLEAIRNIA 242
            + +   +  I   ++ +     N+ 
Sbjct: 241 QRAYEINSKAIQAADEMLG-IANNLR 265


>gi|160901817|ref|YP_001567398.1| flagellar basal-body rod protein FlgG [Petrotoga mobilis SJ95]
 gi|160359461|gb|ABX31075.1| flagellar basal-body rod protein FlgG [Petrotoga mobilis SJ95]
          Length = 261

 Score =  183 bits (464), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 41/258 (15%), Positives = 88/258 (34%), Gaps = 19/258 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S         A +++L  +++N++N DT G++  + +F +++ +   +         
Sbjct: 1   MLVSLYNAATGMNAEQRKLDIISNNLANVDTTGYKKQRAEFQDLLYSSVKEAGTPTAQGS 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRF 106
                                 +G+   T    D A+ GD +F        I  TRDG F
Sbjct: 61  TLPTGLYVGHGTRLAATTRIFTLGNIEPTDNSTDIAIMGDGFFQVQMQDGSIAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           K+  +G L ++ G   + ++      +        +          + +  +        
Sbjct: 121 KLDANGRLTTSDGLMVIPNIVIPQNSVGINVSPDGIVSVSLGDGTIQNVGNLTTVRFLNP 180

Query: 167 QGFVRRENSGI-SPNIPPTPLE----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221
            G     N+          P E          +++G+LE SN + + EM  MI   + ++
Sbjct: 181 GGLKPIGNNLYSETPASGNPTEGIPGQDGFGALQQGYLEKSNVDVVKEMVDMIVAQRAYD 240

Query: 222 SITTLIDENEKSMLEAIR 239
             +  I   ++ +     
Sbjct: 241 INSKTITTADEMLRTVSN 258


>gi|197122909|ref|YP_002134860.1| flagellar basal-body rod protein FlgG [Anaeromyxobacter sp. K]
 gi|220917701|ref|YP_002493005.1| flagellar basal-body rod protein FlgG [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|196172758|gb|ACG73731.1| flagellar basal-body rod protein FlgG [Anaeromyxobacter sp. K]
 gi|219955555|gb|ACL65939.1| flagellar basal-body rod protein FlgG [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 266

 Score =  183 bits (464), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 51/259 (19%), Positives = 102/259 (39%), Gaps = 22/259 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             S         A + R+  +A+N++NT T GF+  + +F +++    +  +        
Sbjct: 7   LRSLYTAATGMEAQQLRMDVIANNLANTGTTGFKRQRAEFEDLLSETIHGAEAPDPRGGT 66

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFK 107
                Q    V +G    +   G  ++TG  LD A+EGD +F ++ P   +  TR G F+
Sbjct: 67  APAALQVGLGVRTGSTVRNFGQGELLTTGNALDLAIEGDGFFRVQRPDGSLAYTRAGNFR 126

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDMS 166
           V   G LV+A G+    ++   P       +    V  +    +  + +  + L +    
Sbjct: 127 VDAAGRLVTARGEVVDPEITFPPETTRVTVDADGTVRAQVAGREAPQELGRLELCTFPNP 186

Query: 167 QGFVRRENSGISPNI------PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
            G      + +             P E  +  T+ +GFLE +N  ++ EM  MI   + +
Sbjct: 187 GGLEAAGGNLLLQTAASGEAVDARPGEQGA-GTLAQGFLEGANVKAVEEMIDMIATQRAY 245

Query: 221 NSITTLIDENEKSMLEAIR 239
              + ++   ++ +     
Sbjct: 246 ELNSRVVQTADQMLQRLTS 264


>gi|220934396|ref|YP_002513295.1| flagellar basal-body rod protein FlgG [Thioalkalivibrio sp.
           HL-EbGR7]
 gi|219995706|gb|ACL72308.1| flagellar basal-body rod protein FlgG [Thioalkalivibrio sp.
           HL-EbGR7]
          Length = 263

 Score =  183 bits (463), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 49/262 (18%), Positives = 94/262 (35%), Gaps = 20/262 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +  I      A + R+S +++N++N +T GF+  +  F +++         +     
Sbjct: 1   MNKALWIAKTGLDAQQTRMSVISNNLANVNTTGFKKGRAVFQDLIYQTVRQAGAQAAQDT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    + V +         G+   T   LD A+EG  +F +  P   I  TRDG F
Sbjct: 61  ELPSGLMLGTGVRTVATEKMFTQGNVTQTENALDMAIEGRGFFQILMPDGNIAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           ++  DG LV++ G      +      +     E   V      +    V+  + L     
Sbjct: 121 QLNSDGQLVTSGGYEVDPGIVIPEGALSVTVAEDGTVSATVAGNVAPIVVGNLQLADFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +           +  +        + +GFLE SN N++ E+  MI   + +
Sbjct: 181 PAGLQPIGQNLFIETAASGAPQAGNPGLDGRGRLLQGFLESSNVNTVEELVNMIETQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNIA 242
              +  I   ++ +     N+ 
Sbjct: 241 EMNSKAISTADQMLQYVNNNLG 262


>gi|218887604|ref|YP_002436925.1| flagellar basal body rod protein FlgG [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218758558|gb|ACL09457.1| flagellar basal-body rod protein FlgG [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 260

 Score =  183 bits (463), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 49/257 (19%), Positives = 94/257 (36%), Gaps = 18/257 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S        +A +  +  +++N++N +T  F+  + +F +++               
Sbjct: 1   MMRSLWTAATGMVAQQLNIDVISNNLANVNTTSFKKSRAEFEDLMYQNMRIAGAATEGDN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107
                 Q    V     +     G + +TG  LD A+EGD +F ++       TR G FK
Sbjct: 61  RIPTGIQVGMGVRPTTVHKFFTQGDYSNTGNSLDLAIEGDGFFLVQVNGEDAYTRAGAFK 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           +  DG +V+A+G     +                     + +      A + LY+     
Sbjct: 121 LNQDGVVVTANGYTLQPEFTVPAETKNITVTENGHISALDSNGAALAEADIPLYTFINPA 180

Query: 168 GFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222
           G   R  +   P+       +         T+ +GFLE SN   + EM  MI   + +  
Sbjct: 181 GLEARGRNLYVPSEASGEAVEGVPGENQVGTIAQGFLEMSNVEVVDEMVNMIVGQRAYEM 240

Query: 223 ITTLIDENEKSMLEAIR 239
            +  I  ++  +  A++
Sbjct: 241 NSKAIQTSDTMLQTAVQ 257


>gi|297543694|ref|YP_003675996.1| flagellar basal-body rod protein FlgG [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
 gi|296841469|gb|ADH59985.1| flagellar basal-body rod protein FlgG [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
          Length = 266

 Score =  183 bits (463), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 63/266 (23%), Positives = 107/266 (40%), Gaps = 25/266 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +     +   A +  +  +A+N++N +T  F+  + +F +++       +       
Sbjct: 1   MMRALWSAASGMTAQQLNVDVIANNLANVNTTAFKRDRAEFKDLIYQTLQRENIYGGQGR 60

Query: 54  ----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKV 108
               Q    V           GS   T   LD AL+G+ +FA+  P G    TRDG FK+
Sbjct: 61  PVNMQVGVGVRPSAIVKDFTEGSLQQTDNPLDLALDGEGFFAVLGPDGTVYYTRDGSFKL 120

Query: 109 TDDGSLVS--ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK-----VIATMGLY 161
           + DG+ +    +  YPVLD +  PI      +  +V   G IS K        +AT+G+Y
Sbjct: 121 SADGNTLMLVTADGYPVLDDSGNPIVFDSTGKDISVSPMGVISVKNPDGTTQEVATLGIY 180

Query: 162 SVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
           +    QG +   N+   P             +     V +GFLE SN   + EM  MI  
Sbjct: 181 NFVNPQGLLSVGNNLYEPTEASGQPGTRDDFEGRMGKVMQGFLETSNVQVVKEMVDMIAA 240

Query: 217 TQKFNSITTLIDENEKSMLEAIRNIA 242
            + +   +  I   ++ +     N+ 
Sbjct: 241 QRAYEINSKAIQAADEMLG-IANNLR 265


>gi|187918627|ref|YP_001884192.1| flagellar basal body rod protein FlgG [Borrelia hermsii DAH]
 gi|119861475|gb|AAX17270.1| flagellar basal-body rod protein FlgG [Borrelia hermsii DAH]
          Length = 265

 Score =  183 bits (463), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 51/263 (19%), Positives = 98/263 (37%), Gaps = 23/263 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +     +   A +  + T+A+N+SN +T GF+ I+ +F +++   +           
Sbjct: 1   MMRALWTAASGMKAQQYNVDTIANNLSNVNTTGFKKIRAEFEDLIYQTQRRAGTPATEDT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                            +   E G+  +T    D A+EG+ ++ +  P G    TRDG F
Sbjct: 61  VSPLGNQVGHGTKVSATHRIFEQGNLQATNLNTDVAIEGNGFYKILLPDGTYGYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNV---GEKGEISQKGKVIATMGLYSV 163
           K+  +G+LV++ G   + D++     I     I        K + S +   +  M +   
Sbjct: 121 KIDANGALVTSQGYKLLPDISFPEGYIKDSITISQEGIISVKVDESPEPIELGQMEIVRF 180

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
               G     N+     I                 +++G LE SN +   EM  MI   +
Sbjct: 181 VNPAGLNAIGNNIFKETIGSGEEISGTPGSDGMGRLRQGILEMSNVSIAEEMVTMIVAQR 240

Query: 219 KFNSITTLIDENEKSMLEAIRNI 241
            +   +  I  ++  +     N+
Sbjct: 241 AYEINSKAIQTSDNMLG-IANNL 262


>gi|206890777|ref|YP_002249848.1| flagellar basal-body rod protein FlgG [Thermodesulfovibrio
           yellowstonii DSM 11347]
 gi|206742715|gb|ACI21772.1| flagellar basal-body rod protein FlgG [Thermodesulfovibrio
           yellowstonii DSM 11347]
          Length = 262

 Score =  183 bits (463), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 48/258 (18%), Positives = 87/258 (33%), Gaps = 20/258 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S         A +  L  ++ N++N +T GF+  + +F +++     +         
Sbjct: 1   MLRSLFTASTGMYAQQLNLDVISHNLANVNTTGFKKGRAEFQDLLYQNVINPGAPSDDGT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q    V           G  I+TG +LD A++GD +F +  P   I  TR G F
Sbjct: 61  QYPSGIQVGLGVRPVAVAKFFTPGDLINTGNDLDLAIDGDGFFQVTLPDGTIAYTRAGNF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           ++  DG +V+  G      +                V      +     I T+ L     
Sbjct: 121 RIDKDGRIVTNDGYPIEPGITVPADATKITFGADGTVTVLQPGTVAPVQIGTVELARFIN 180

Query: 166 SQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +                       + +GFLE SN N + E+  MI   + F
Sbjct: 181 PGGLQAIGRNLFLETDASGTPTTGTPGTEGRGKIVQGFLEMSNVNIVEELANMIIAQRAF 240

Query: 221 NSITTLIDENEKSMLEAI 238
           +  +  +  +++ +    
Sbjct: 241 DINSKAVQTSDEMLQTVA 258


>gi|146295641|ref|YP_001179412.1| hypothetical protein Csac_0595 [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145409217|gb|ABP66221.1| protein of unknown function DUF1078 domain protein
           [Caldicellulosiruptor saccharolyticus DSM 8903]
          Length = 267

 Score =  182 bits (462), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 47/266 (17%), Positives = 95/266 (35%), Gaps = 26/266 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +         A +  +  +++N++N +T  F+  K +F +++    +  D       
Sbjct: 1   MMRALYSAALGMKAQQTNVDIISNNLANVNTTAFKKDKAEFKDLLYETLSRADVIAGDGK 60

Query: 54  ----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109
               Q    V       S   G+   T   LD A++G+ +F + +P G   TRDG FKV+
Sbjct: 61  PVSLQIGHGVTISAITKSFSEGNLERTENPLDLAIQGEGFFVVSTPNGPRYTRDGSFKVS 120

Query: 110 DDGSL---VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL------ 160
           +       V++ G   + +  +  +          + E G I+ K               
Sbjct: 121 NVEGQIKLVTSDGYPVLAEGDTEIVLPETAISSITIDETGRITYKDAEGQIQDSGFKIKI 180

Query: 161 YSVDMSQGFVRRENSGISPNIP-----PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIH 215
                 QG +    +  + +            +     + +GFLE SN   + EM ++I 
Sbjct: 181 VRFINPQGLLAEGKNLYNVSAASGDPVSEEEIEGPKSRILQGFLEMSNVQVVDEMVKLII 240

Query: 216 LTQKFNSITTLIDENEKSMLEAIRNI 241
             + +   +  I   +  +     N+
Sbjct: 241 AQRAYEINSKAIQTADDML-SMANNL 265


>gi|86157777|ref|YP_464562.1| flagellar basal-body rod FlgG [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85774288|gb|ABC81125.1| flagellar basal-body rod FlgG [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 266

 Score =  182 bits (462), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 51/259 (19%), Positives = 101/259 (38%), Gaps = 22/259 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             S         A + R+  +A+N++NT T GF+  + +F +++       +        
Sbjct: 7   LRSLYTAATGMEAQQLRMDVIANNLANTGTTGFKRQRAEFEDLLSETVRGAEAPDPRGGT 66

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFK 107
                Q    V +G    +   G  ++TG  LD A+EGD +F ++ P   +  TR G F+
Sbjct: 67  APAPLQVGLGVRTGSTVRNFGQGELLTTGNALDLAVEGDGFFRVQRPDGSLAYTRAGNFR 126

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDMS 166
           V   G LV+A G+    ++   P       +    V  +    +  + +  + L +    
Sbjct: 127 VDAAGRLVTARGEVVDPEITFPPETTRVTVDADGTVRAQVAGREAPQELGRLELCTFPNP 186

Query: 167 QGFVRRENSGISPNI------PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
            G      + +             P E  +  T+ +GFLE +N  ++ EM  MI   + +
Sbjct: 187 GGLEAAGGNLLLQTAASGEAVDARPGEQGA-GTLAQGFLEGANVKAVEEMIDMIATQRAY 245

Query: 221 NSITTLIDENEKSMLEAIR 239
              + ++   ++ +     
Sbjct: 246 ELNSRVVQTADQMLQRLTS 264


>gi|78221651|ref|YP_383398.1| hypothetical protein Gmet_0430 [Geobacter metallireducens GS-15]
 gi|78192906|gb|ABB30673.1| conserved hypothetical protein [Geobacter metallireducens GS-15]
          Length = 242

 Score =  182 bits (462), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 52/247 (21%), Positives = 99/247 (40%), Gaps = 12/247 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV----GAIKNDIDQKI 56
           M +     L   +A  +RL  +++N++N +T GF+  ++ F  ++       +       
Sbjct: 1   MNSGIYSALTGNVAAMKRLDVLSNNLANVNTPGFKKDRMTFESMLQTVGAQPRPGGGTDA 60

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLV 115
              A    +     GS   TG   D A++GD +FA+ +  G    TR G F++   G LV
Sbjct: 61  PVFAETTFFTDYSPGSVKQTGNPFDLAIDGDGFFAVTTADGQRAYTRQGNFRLDSTGRLV 120

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
           +A G      +     ++        +  KGE+   G  +  + +          +    
Sbjct: 121 TADGAQVAGGVVIAGGKVD-------INGKGEVLVDGSQVGRLEVVDFPKPYALQKLGGG 173

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
              P  P      ++G  V +G +E+SN N++ EM Q+I   + F   + ++   +    
Sbjct: 174 LFVPADPQATPNPVTGEKVMQGAIEESNVNTVQEMVQLIETNRYFEMCSKVVKAYDDLTG 233

Query: 236 EAIRNIA 242
           +A   I 
Sbjct: 234 KAANEIG 240


>gi|154686045|ref|YP_001421206.1| flagellar basal body rod protein FlgG [Bacillus amyloliquefaciens
           FZB42]
 gi|154351896|gb|ABS73975.1| FlgE [Bacillus amyloliquefaciens FZB42]
          Length = 258

 Score =  182 bits (462), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 48/255 (18%), Positives = 97/255 (38%), Gaps = 16/255 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------Q 54
           M  S   G++     + +L  + +N++N +TVGF+  +V F +++              Q
Sbjct: 1   MLRSLYSGISGMKNFQTKLDVIGNNIANVNTVGFKKSRVTFKDMISQTVAGGSNVTNSKQ 60

Query: 55  KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSL 114
                A+    +    G+  +T  + D A++GD +F + +  GI+ TR G F   + G+L
Sbjct: 61  IGLGAATSSIDVVHSTGAPQATQNKTDLAIDGDGYFQINTGAGIVYTRAGNFGKDNQGNL 120

Query: 115 VSASGKYPVLDMAS----VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170
           V+  G Y                             +   +      +GL +   S G  
Sbjct: 121 VTTDGYYLEKIGGGKINIPTDAKDYSIGADGTVTYTDAGDEVHDAGQIGLVTFPNSAGLE 180

Query: 171 RRENSGISPNIPPTP------LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224
           +   +    ++            +     +  G+LE SN +   E  +MI   + F S +
Sbjct: 181 KIGGNLYRESLSSGAASAVTTPGENGTGKLLAGYLEMSNVDLTDEFTEMIVAQRGFQSNS 240

Query: 225 TLIDENEKSMLEAIR 239
            +I  +++ + E + 
Sbjct: 241 KIITTSDEILQELVN 255


>gi|167038783|ref|YP_001661768.1| flagellar basal body rod protein [Thermoanaerobacter sp. X514]
 gi|256751340|ref|ZP_05492219.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter
           ethanolicus CCSD1]
 gi|300913632|ref|ZP_07130949.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter sp. X561]
 gi|307723353|ref|YP_003903104.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter sp. X513]
 gi|166853023|gb|ABY91432.1| flagellar basal body rod protein [Thermoanaerobacter sp. X514]
 gi|256749722|gb|EEU62747.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter
           ethanolicus CCSD1]
 gi|300890317|gb|EFK85462.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter sp. X561]
 gi|307580414|gb|ADN53813.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter sp. X513]
          Length = 251

 Score =  182 bits (462), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 57/253 (22%), Positives = 107/253 (42%), Gaps = 15/253 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG-----------AIK 49
           M        +  +   + +  +A+N++N +TVG++   V  S                  
Sbjct: 1   MLRGLYTASSGMITQTKIMDVLANNLANVNTVGYKRDVVVTSSFPNFEVTRHGGDNIPPN 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109
             I +    V     + + E G+F  T  +LDFA++G+ +F +++P G   TRDG F ++
Sbjct: 61  GKIGRMDYGVLVDTFHTNFEEGAFSQTNGKLDFAIDGNGFFVVDTPNGQRYTRDGSFTLS 120

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169
            DG LV+  G             I       +V E G I   G+++  + +   D   G 
Sbjct: 121 KDGHLVTKEGYIVE----GENGPIQLSQGDISVDEMGNIINNGQLVDRLRIVDFDNYDGL 176

Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
            +  N+    +             +K+GFLE SN NS+ EM  MI + + + S   ++  
Sbjct: 177 RKEGNNLFFIDNSTNVQVIPVTGKIKQGFLEQSNVNSVKEMVNMISVMRNYESNQKVVIA 236

Query: 230 NEKSMLEAIRNIA 242
            ++++ +A+  + 
Sbjct: 237 FDETLGKAVNEVG 249


>gi|78358198|ref|YP_389647.1| flagellar basal body rod protein FlgG [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78220603|gb|ABB39952.1| Flagellar basal body rod protein [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
          Length = 261

 Score =  182 bits (462), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 50/257 (19%), Positives = 97/257 (37%), Gaps = 18/257 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S        +A +  + T+++N++N +T+GF+  + +F +++               
Sbjct: 1   MMRSLWTAATGMIAQQLNIDTISNNLANVNTLGFKKSRAEFEDLMYQNMKIAGSVTGNDQ 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107
                 Q    V     +     G + +TG  LD A+EGD +F +        TR G FK
Sbjct: 61  RIPTGIQVGLGVRPTTVHKFFTQGDYSNTGNPLDLAIEGDGFFQVTVNGEPAYTRAGAFK 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           +  DG++V+A+G     +    P                + + +    A + LY+     
Sbjct: 121 LNQDGTVVTANGYPLEPEFTVPPETKNVVVTENGHIAALDKNGEELAAADIPLYTFINPA 180

Query: 168 GFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222
           G      +    +       +      +  T+ +GFLE SN   + EM  MI   + +  
Sbjct: 181 GLQAAGRNLYLASEASGVAVEGVPGEDNVGTIAQGFLEMSNVEVVDEMVNMIVGQRAYEM 240

Query: 223 ITTLIDENEKSMLEAIR 239
            +  I  ++  +  A +
Sbjct: 241 NSKAIQASDNMLQTATQ 257


>gi|256830176|ref|YP_003158904.1| flagellar basal-body rod protein FlgG [Desulfomicrobium baculatum
           DSM 4028]
 gi|256579352|gb|ACU90488.1| flagellar basal-body rod protein FlgG [Desulfomicrobium baculatum
           DSM 4028]
          Length = 260

 Score =  182 bits (461), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 48/259 (18%), Positives = 92/259 (35%), Gaps = 19/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +     +  +A +  L   A+N++N +T GF+  + +F +++               
Sbjct: 1   MIRALWTSASGMIAQQLNLDVTANNLANVNTTGFKKNRAEFEDLMYQNMKIAGSSNQEGD 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107
                 Q    V     +     G F +TG +LD  +EGD +F ++       TR G FK
Sbjct: 61  RLPVGMQVGMGVRPVSVHKIFTQGDFQNTGNQLDLVIEGDGFFRVDRGGEESYTRSGAFK 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           +  DG +V+ +G     +    P                + +        + +Y+     
Sbjct: 121 LDSDGRIVTDNGHPLQPEFIVPPETQNIVVTEDGRLTCVDKAGAEIAGTDIPVYTFVNPA 180

Query: 168 GFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222
           G      +                 + +  T+ +GFLE SN   + EM  MI   + + +
Sbjct: 181 GLKAMGRNLYVQTDGSGEAVESVPGENNAGTLAQGFLEMSNVEIVEEMVNMIVGQRAYEA 240

Query: 223 ITTLIDENEKSMLEAIRNI 241
            +  I   +  ML+    +
Sbjct: 241 NSKSITTAD-MMLQTANQL 258


>gi|326389274|ref|ZP_08210842.1| flagellar basal-body rod protein FlgG [Thermoanaerobacter
           ethanolicus JW 200]
 gi|325994637|gb|EGD53061.1| flagellar basal-body rod protein FlgG [Thermoanaerobacter
           ethanolicus JW 200]
          Length = 266

 Score =  181 bits (460), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 61/266 (22%), Positives = 106/266 (39%), Gaps = 25/266 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +         A +  +  +A+N++N +T  F+  + +F +++       +       
Sbjct: 1   MMRALWSAATGMTAQQLNVDVIANNLANVNTTAFKRDRAEFKDLIYQTLQRENVYGGQGK 60

Query: 54  ----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKV 108
               Q    V           GS   T   LD AL+G+ +FA+  P   +  TRDG FK+
Sbjct: 61  PVNMQVGVGVRPSAIVKDFTEGSLQQTENPLDLALDGEGFFAVLGPDDKVYYTRDGSFKL 120

Query: 109 TDDGSLVS--ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK-----VIATMGLY 161
           + DG+ +    +  YPVLD +  PI     ++  +V   G IS K        +AT+G+Y
Sbjct: 121 SADGNTLMLVTADGYPVLDDSGNPIVFDSTEKDISVSPMGVISVKNPDGTTQEVATLGIY 180

Query: 162 SVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
           +    QG +   ++   P                   V +GFLE SN   + EM  MI  
Sbjct: 181 NFVNPQGLLSVGSNLYEPTEASGQPGTRDDFQGRMGKVMQGFLETSNVQVVKEMVDMIAA 240

Query: 217 TQKFNSITTLIDENEKSMLEAIRNIA 242
            + +   +  I   ++ +     N+ 
Sbjct: 241 QRAYEINSKAIQAADEMLG-IANNLR 265


>gi|167038473|ref|YP_001666051.1| hypothetical protein Teth39_2092 [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|320116868|ref|YP_004187027.1| flagellar basal-body rod protein FlgG [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|166857307|gb|ABY95715.1| protein of unknown function DUF1078 domain protein
           [Thermoanaerobacter pseudethanolicus ATCC 33223]
 gi|319929959|gb|ADV80644.1| flagellar basal-body rod protein FlgG [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
          Length = 266

 Score =  181 bits (460), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 61/266 (22%), Positives = 106/266 (39%), Gaps = 25/266 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +         A +  +  +A+N++N +T  F+  + +F +++       +       
Sbjct: 1   MMRALWSAATGMTAQQLNVDVIANNLANVNTTAFKRDRAEFKDLIYQTLQRENVYGGQGK 60

Query: 54  ----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKV 108
               Q    V           GS   T   LD AL+G+ +FA+  P   +  TRDG FK+
Sbjct: 61  PVNMQVGVGVRPSAIVKDFTEGSLQQTENPLDLALDGEGFFAVLGPDDKVYYTRDGSFKL 120

Query: 109 TDDGSLVS--ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK-----VIATMGLY 161
           + DG+ +    +  YPVLD +  PI     ++  +V   G IS K        +AT+G+Y
Sbjct: 121 SADGNTLMLVTADGYPVLDDSGNPIVFDSTEKDISVSPMGVISVKNPDGTTQEVATLGIY 180

Query: 162 SVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
           +    QG +   ++   P                   V +GFLE SN   + EM  MI  
Sbjct: 181 NFVNPQGLLSVGSNLYEPTEASGQPSTRDDFQGRMGKVMQGFLETSNVQVVKEMVDMIAA 240

Query: 217 TQKFNSITTLIDENEKSMLEAIRNIA 242
            + +   +  I   ++ +     N+ 
Sbjct: 241 QRAYEINSKAIQAADEMLG-IANNLR 265


>gi|308173591|ref|YP_003920296.1| flagellar hook protein [Bacillus amyloliquefaciens DSM 7]
 gi|307606455|emb|CBI42826.1| flagellar hook protein [Bacillus amyloliquefaciens DSM 7]
 gi|328553477|gb|AEB23969.1| flagellar basal body rod protein FlgG [Bacillus amyloliquefaciens
           TA208]
 gi|328911732|gb|AEB63328.1| flagellar hook protein [Bacillus amyloliquefaciens LL3]
          Length = 258

 Score =  181 bits (460), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 53/256 (20%), Positives = 106/256 (41%), Gaps = 18/256 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------Q 54
           M  S   G++     + +L  + +N++N +TVGF+  +V F +++              Q
Sbjct: 1   MLRSLYSGISGMKNFQTKLDVIGNNIANVNTVGFKKSRVTFKDMISQTVAGGSNVTNSKQ 60

Query: 55  KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSL 114
                A+    +    G+  +T  + D A++GD +F + +  GI+ TR G F   + G+L
Sbjct: 61  IGLGAATSSIDVVHSTGAPQATQNKSDLAIDGDGYFQINTGSGIVYTRAGNFGKDNKGNL 120

Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG-----KVIATMGLYSVDMSQGF 169
           V+  G Y         I IP   + +++G  G ++             +GL +   S G 
Sbjct: 121 VTTDGYYLEKIG-GGKINIPTDAKDYSIGADGTVTYTDAGDAVHNAGQIGLVTFPNSSGL 179

Query: 170 VRRENSGISPNIPPTP------LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223
            +   +    ++            +     +  G+LE SN +   E  +MI   + F S 
Sbjct: 180 EKIGGNLYRESLSSGAASAVTTPGENGTGKLLAGYLEMSNVDLTDEFTEMIVAQRGFQSN 239

Query: 224 TTLIDENEKSMLEAIR 239
           + +I  +++ + E + 
Sbjct: 240 SKIITTSDEILQELVN 255


>gi|225619854|ref|YP_002721111.1| flagellar basal body rod protein FlgG [Brachyspira hyodysenteriae
           WA1]
 gi|225214673|gb|ACN83407.1| flagellar basal body rod protein FlgG [Brachyspira hyodysenteriae
           WA1]
          Length = 264

 Score =  181 bits (460), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 50/261 (19%), Positives = 102/261 (39%), Gaps = 22/261 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S     +    ++ +  T+A+N++N +T+G++ ++  F +++               
Sbjct: 1   MVRSLWTAASGMNGMQFKTDTIANNLANVNTIGYKKVRADFEDLIYQNLKIQGTPATEDT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                      V S       + GS  +TG +LD ALEG+ +F +  P   +  TRDG F
Sbjct: 61  VTPVGLQTGLGVKSAATQKMFDQGSLQATGNKLDLALEGEGFFQVLMPDGSVSYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNV---GEKGEISQKGKVIATMGLYSV 163
           K+  +G LV+++G   V ++      + ++  I        K         I  + L+  
Sbjct: 121 KIDANGQLVTSNGYRLVPEIVFPENFLVEQISISREGIVSVKIGDENDPVEIGQITLHRF 180

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQ 218
               G +   ++     I   P  +          + +GF+E SN   + EM  MI   +
Sbjct: 181 INQPGLLSIGDNLYKETIASGPAFEGEPGANGFPRIHQGFVEMSNVKVVDEMVDMIVAQR 240

Query: 219 KFNSITTLIDENEKSMLEAIR 239
            +   +  +  ++  +   + 
Sbjct: 241 AYEMNSKAVQTSDNLLATVVN 261


>gi|291280520|ref|YP_003497355.1| flagellar basal-body rod protein FlgG [Deferribacter desulfuricans
           SSM1]
 gi|290755222|dbj|BAI81599.1| flagellar basal-body rod protein FlgG [Deferribacter desulfuricans
           SSM1]
          Length = 262

 Score =  181 bits (459), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 51/261 (19%), Positives = 94/261 (36%), Gaps = 21/261 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +     +     +  +  +++N++N +T GF+  +V F +++               
Sbjct: 1   MLRTLWTAASGMTTQQINIDNISNNLANVNTAGFKKSRVNFEDLLYQELKPAGGVTAAGI 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                 Q                G+F  TG  LD A+EGD +F +  P G I  TR+G F
Sbjct: 61  NHPTGIQIGLGSKVVSTEKIFSQGNFQQTGNPLDIAIEGDGFFQVTLPDGTIGYTRNGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           KV  DG+LV+A G     ++A     +     E   +        +   +  + L     
Sbjct: 121 KVDADGNLVTAEGYLLEPNIAIPDNALEIIVGEDGTLSVTLPGEAEPTELGQIELAKFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +                      T+ +G LE SN N + EM  +I   + +
Sbjct: 181 PSGLRSIGKNIYLQTAASGEPTTGIPGEDGFGTLAQGILEMSNVNVVEEMVNLITGQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
              +  I   ++ + + + N+
Sbjct: 241 EINSKAIQTGDEML-QIVNNL 260


>gi|45657204|ref|YP_001290.1| flagellar basal body rod protein FlgG [Leptospira interrogans
           serovar Copenhageni str. Fiocruz L1-130]
 gi|45600442|gb|AAS69927.1| FlgG [Leptospira interrogans serovar Copenhageni str. Fiocruz
           L1-130]
          Length = 265

 Score =  181 bits (459), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 56/262 (21%), Positives = 95/262 (36%), Gaps = 23/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S        +A +  + T+++N++N +T GF+  +  F ++V   +           
Sbjct: 1   MMRSLWTAATGMIAQQFHIDTISNNLANVNTTGFKKNRADFEDLVYQHQVLAGTPATSVS 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGR 105
                      V +       E+GSF +TG +LD A+ G+  F            TRDG 
Sbjct: 61  EIPTGVNVGHGVRAAASQKLFEIGSFQATGNKLDMAITGEMGFFKIQMPDGSFAFTRDGS 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI---SQKGKVIATMGLYS 162
           FK+  +  +V+++G      +      I     I   GE         +  VI  + LY 
Sbjct: 121 FKIDSNQQVVTSNGYLLEPPLILPEGAILNTLMISEQGEVTVKVGADIRPIVIGQVELYR 180

Query: 163 VDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLT 217
                G      +     +   P             V +GFLE SN   + EM  MI   
Sbjct: 181 FVNPAGLQAIGKNLFQETVASGPEIPGTPGMEGFGNVLQGFLEMSNVKIVEEMVAMIVAQ 240

Query: 218 QKFNSITTLIDENEKSMLEAIR 239
           + + S +  I  ++  +  AI 
Sbjct: 241 RAYESNSKAIQTSDNMLSTAIS 262


>gi|300871597|ref|YP_003786470.1| flagellar basal-body rod protein FlgG [Brachyspira pilosicoli
           95/1000]
 gi|300689298|gb|ADK31969.1| flagellar basal-body rod protein, FlgG [Brachyspira pilosicoli
           95/1000]
          Length = 264

 Score =  181 bits (459), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 50/261 (19%), Positives = 103/261 (39%), Gaps = 22/261 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S     +    ++ +  T+A+N++N +T+G++ ++  F +++               
Sbjct: 1   MLRSLWTAASGMNGMQFKTDTIANNLANVNTIGYKKVRADFEDLIYQNLKIQGTPATEDT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                      V S       + GS  +TG +LD ALEG+ +F +  P   +  TRDG F
Sbjct: 61  VTPVGLQTGLGVKSAATQKMFDQGSLQATGNKLDLALEGEGFFQVLMPDGSVSYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNV---GEKGEISQKGKVIATMGLYSV 163
           KV  +G LV+++G   V ++      + +K  I              +   +  + L+  
Sbjct: 121 KVDANGQLVTSNGYKLVPEIIFPENFLVEKINISREGVVSVTIGDENEPVELGNITLHRF 180

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQ 218
               G +   ++     I   P  +    +     + +GF+E SN   + EM  MI   +
Sbjct: 181 INQAGLLSIGDNLYKETIASGPAFEGEAGSKGFPRIHQGFVEMSNVKVVDEMVDMIVAQR 240

Query: 219 KFNSITTLIDENEKSMLEAIR 239
            +   +  +  ++  +   + 
Sbjct: 241 AYEMNSKAVQTSDNLLATVVN 261


>gi|58426792|gb|AAW75829.1| flagellar biosynthesis cell-distal portion of basal-body rod
           [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 341

 Score =  181 bits (459), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 48/261 (18%), Positives = 90/261 (34%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  +      A + R+S +++N++NT+T GF+  +  F +++               
Sbjct: 81  MNQALWVAKTGLDAQQTRMSVISNNLANTNTTGFKRDRAAFEDLLYQQVRAPGGSTSAQT 140

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V     +   + GS   TG  LD  + G  +F ++ P G    TRDG F
Sbjct: 141 QLPTGLQLGTGVRVVSTFKGFDQGSQQQTGRALDVMVNGRGFFEVQMPDGTSAYTRDGTF 200

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165
           ++   G LV+ SG      +                           + I  + L     
Sbjct: 201 QINAQGQLVTNSGYPLQPGIQVPEGAQSLTIGNDGTISVTLAGQAAAQEIGALTLTDFIN 260

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   +  +         P ++ +          +G LE SN N++ E+  MI   + +
Sbjct: 261 PSGLQSKGENLFVETTASGPAQNGTPGLNGLGNTVQGALEGSNVNTVEELVSMIETQRAY 320

Query: 221 NSITTLIDENEKSMLEAIRNI 241
                 I   +  +     N+
Sbjct: 321 EMNAKAISTTDAMLGYLNNNV 341


>gi|220903671|ref|YP_002478983.1| flagellar basal body rod protein FlgG [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
 gi|219867970|gb|ACL48305.1| flagellar basal-body rod protein FlgG [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
          Length = 261

 Score =  181 bits (459), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 53/257 (20%), Positives = 100/257 (38%), Gaps = 18/257 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G    +A +  +  +++N++N +T GF+  + +F +++               
Sbjct: 1   MMRSLWTGATGMVAQQLNIDVISNNLANVNTTGFKKSRAEFEDLMYQTMRMAGSITEGDN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107
                 Q          +     G F +TG  LD A+EGD +F ++    ++ TR G FK
Sbjct: 61  RLPVGIQVGMGTRPTAVHKFFTQGDFQNTGNTLDVAIEGDGFFQVDVNGELMYTRAGSFK 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           +  DG +V+A+G     + A  P                +   +    A + LY+     
Sbjct: 121 LNQDGVVVTANGYILQPEFAVPPETKNISISSSGHIAALDAQGQEIAGAEIPLYTFINYA 180

Query: 168 GFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222
           G   R  +  +P        +      +  T+ +GFLE SN   + EM  MI   + +  
Sbjct: 181 GLDARGRNLFTPTEASGEAVEGIPGTDNVGTLAQGFLEMSNVEVVDEMVNMIVGQRAYEV 240

Query: 223 ITTLIDENEKSMLEAIR 239
            +  I  ++  +  A++
Sbjct: 241 NSKSIQTSDSMLGIAVQ 257


>gi|315185552|gb|EFU19321.1| flagellar basal-body rod protein FlgG [Spirochaeta thermophila DSM
           6578]
          Length = 264

 Score =  181 bits (459), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 48/261 (18%), Positives = 93/261 (35%), Gaps = 22/261 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S     +  +  +  + TVA+N+SN +T GF+  +V F +++               
Sbjct: 1   MMRSLWTAASGMVGQQYHIDTVANNLSNVNTTGFKKNRVDFQDLIYQTVRMAGTPATEVT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                      V           G+   T    D A++G+ +F +    G    TRDG F
Sbjct: 61  VVPTPTQVGHGVRVAASSKIFTQGALQHTDNVSDLAIQGEGFFRVLLYDGTYAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE---KGEISQKGKVIATMGLYSV 163
           K+  +G LV+++G   + ++      I     +   G    K         +  + +Y  
Sbjct: 121 KIDSNGQLVTSNGYRLIPEIVLPEGFIADTLSVSEDGRVTVKVPGQDDPVEVGQIQIYRF 180

Query: 164 DMSQGFVRRENSGI-SPNIPPTP----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
               G +   ++     N    P            +   FLE SN + + EM +MI   +
Sbjct: 181 VNPSGLLAVGDNLYKVTNASGDPIGGRPGFDGMGKLLHKFLEMSNVSVVNEMVEMIVAQR 240

Query: 219 KFNSITTLIDENEKSMLEAIR 239
            +   +  +  ++  +  A+ 
Sbjct: 241 AYELNSKAVQTSDSMLGTAVN 261


>gi|307718428|ref|YP_003873960.1| flagellar basal-body rod protein [Spirochaeta thermophila DSM 6192]
 gi|306532153|gb|ADN01687.1| flagellar basal-body rod protein [Spirochaeta thermophila DSM 6192]
          Length = 264

 Score =  181 bits (459), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 50/261 (19%), Positives = 93/261 (35%), Gaps = 22/261 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S     +  +  +  + TVA+N+SN +T GF+  +V F +++               
Sbjct: 1   MMRSLWTAASGMVGQQYHIDTVANNLSNVNTTGFKKNRVDFQDLIYQTVRMAGTPATEVT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                      V           G+   T    D A++G+ +F +    G    TRDG F
Sbjct: 61  VVPTPTQVGHGVRVAASSKIFTQGALQHTDNVSDLAIQGEGFFRVLLYDGTYAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQK---DEIFNVGEKGEISQKGKVIATMGLYSV 163
           K+  +G LV+++G   + ++      I       E   V  K         +  + LY  
Sbjct: 121 KIDSNGQLVTSNGYRLIPEIVLPEGFIADTLAVSEDGRVTVKVPGQDDPVEVGQIQLYRF 180

Query: 164 DMSQGFVRRENSGI-SPNIPPTP----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
               G +   ++     N    P            +   FLE SN + + EM +MI   +
Sbjct: 181 VNPAGLLAVGDNLYKVTNASGDPIGGRPGFDGMGKLLHKFLEMSNVSVVNEMVEMIVAQR 240

Query: 219 KFNSITTLIDENEKSMLEAIR 239
            +   +  +  ++  +  A+ 
Sbjct: 241 AYELNSKAVQTSDSMLGTAVN 261


>gi|241766922|ref|ZP_04764728.1| flagellar basal-body rod protein FlgG [Acidovorax delafieldii 2AN]
 gi|241362626|gb|EER58474.1| flagellar basal-body rod protein FlgG [Acidovorax delafieldii 2AN]
          Length = 259

 Score =  181 bits (459), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 47/258 (18%), Positives = 91/258 (35%), Gaps = 19/258 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S  I      A + +L  ++ N++N  T G++     F +++      +        
Sbjct: 1   MINSLWIAKTGMSAQQTQLDVISHNLANVSTTGYKRNNAVFEDLIYQNLRQVGANSSEQS 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                      V           G+   +G + D A+ G  +F +  P      TRDG F
Sbjct: 61  QLPTGLHLGLGVNVVATNRDFRQGALQQSGKDFDLAINGAGFFQVSMPDGTTAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
            +  DG +V++SG      +  V   +             + + K      + L S    
Sbjct: 121 TIDKDGQMVNSSGYPLTDGITKVAGAVKASIAANGEVTFTDSAGKAVGTGRLTLASFINP 180

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFN 221
            G      +    +I     +  S  +     +K+GFLE SN N + E+  MI   + + 
Sbjct: 181 AGLEPVGQNLYKESIASGNPQTGSPTSAGFGELKQGFLETSNVNVVEELVTMIQTQRAYE 240

Query: 222 SITTLIDENEKSMLEAIR 239
             +  I  +++ + +  +
Sbjct: 241 MNSKAIQTSDQMLAKLAQ 258


>gi|296127366|ref|YP_003634618.1| flagellar basal-body rod protein FlgG [Brachyspira murdochii DSM
           12563]
 gi|296019182|gb|ADG72419.1| flagellar basal-body rod protein FlgG [Brachyspira murdochii DSM
           12563]
          Length = 264

 Score =  181 bits (459), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 49/261 (18%), Positives = 102/261 (39%), Gaps = 22/261 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S     +    ++ +  T+A+N++N +T+G++ ++  F +++               
Sbjct: 1   MVRSLWTAASGMNGMQFKTDTIANNLANVNTIGYKKVRADFEDLIYQNLKIQGTPATEDT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                      V S       + GS  +TG +LD ALEG+ +F +  P   +  TRDG F
Sbjct: 61  VRPVGLQTGLGVKSASTQKMFDQGSLQATGNKLDLALEGEGFFQVLMPDGSVSYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNV---GEKGEISQKGKVIATMGLYSV 163
           K+  +G +V+++G   V ++      + ++  I        K         I  + L+  
Sbjct: 121 KIDANGQMVTSNGYRLVPEIVFPENFLVEQISISREGVVSVKIGDENDPVEIGQITLHRF 180

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQ 218
               G +   ++     I   P  +          + +GF+E SN   + EM  MI   +
Sbjct: 181 INQPGLLSIGDNLYKETIASGPAFEGEPGANGFPRIHQGFVEMSNVKVVDEMVDMIVAQR 240

Query: 219 KFNSITTLIDENEKSMLEAIR 239
            +   +  +  ++  +   + 
Sbjct: 241 AYEMNSKAVQTSDNLLATVVN 261


>gi|307266108|ref|ZP_07547653.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|306918890|gb|EFN49119.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter wiegelii
           Rt8.B1]
          Length = 251

 Score =  181 bits (458), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 57/253 (22%), Positives = 107/253 (42%), Gaps = 15/253 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV-----------GAIK 49
           M        +  +   + +  +A+N++N +TVG++   V  S                  
Sbjct: 1   MLRGLYTASSGMITQTKIMDVLANNLANVNTVGYKRDVVVTSSFPNFEVTRHGGDNTPPN 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109
             I +    V     + + E G+F  T  +LDFA++G+ +F + +P G   TRDG F ++
Sbjct: 61  GKIGRMDYGVLVDTFHTNFEEGAFSQTNGKLDFAIDGNGFFVVNTPNGQRYTRDGSFTLS 120

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169
            DG LV+  G             I       +V E G I   G+++  + +   D   G 
Sbjct: 121 KDGYLVTQEGYIVE----GENGPIQLSQGDISVDEMGNIINNGQLVDRLRIVDFDNYDGL 176

Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
            +  N+    +         +   +K+GFLE SN NS+ EM  MI + + + S   ++  
Sbjct: 177 RKEGNNLFFIDNSANVQVIPATGKIKQGFLEQSNVNSVKEMVNMISVMRNYESNQKVVIA 236

Query: 230 NEKSMLEAIRNIA 242
            ++++ +A+  + 
Sbjct: 237 FDETLGKAVNEVG 249


>gi|312794499|ref|YP_004027422.1| flagellar basal-body rod protein flgg [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312876700|ref|ZP_07736680.1| flagellar basal-body rod protein FlgG [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|311796540|gb|EFR12889.1| flagellar basal-body rod protein FlgG [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|312181639|gb|ADQ41809.1| flagellar basal-body rod protein FlgG [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 267

 Score =  181 bits (458), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 47/266 (17%), Positives = 96/266 (36%), Gaps = 26/266 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +         A +  +  +++N++N +T  F+  K +F +++    +  D       
Sbjct: 1   MMRALYSAALGMKAQQTNVDIISNNLANVNTTAFKKDKAEFKDLLYETLSRADVVAGDGK 60

Query: 54  ----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109
               Q    V       S   G+   T   LD A++G+ +F + +P G   TRDG FKV+
Sbjct: 61  PVSLQIGHGVTISAITKSFAEGNLERTENPLDLAIQGEGFFVVSTPNGPRYTRDGSFKVS 120

Query: 110 DDGSL---VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL------ 160
           +       V++ G   + +  +  +          + E G I+ K +             
Sbjct: 121 NVEGQIKLVTSDGYPVLAEGDTEIVLPETAISSITIDETGRITYKDQDGQIQDSGLKIKI 180

Query: 161 YSVDMSQGFVRRENSGISPNIP-----PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIH 215
                 QG +    +  + +            +     + +GFLE SN   + EM ++I 
Sbjct: 181 VRFINPQGLLAEGKNLYNVSAASGDPVSEEEIEGQKSRILQGFLEMSNVQVVDEMVKLII 240

Query: 216 LTQKFNSITTLIDENEKSMLEAIRNI 241
             + +   +  I   +  +     N+
Sbjct: 241 AQRAYEINSKAIQTADDML-SMANNL 265


>gi|312136039|ref|YP_004003377.1| flagellar basal-body rod protein flgg [Caldicellulosiruptor
           owensensis OL]
 gi|311776090|gb|ADQ05577.1| flagellar basal-body rod protein FlgG [Caldicellulosiruptor
           owensensis OL]
          Length = 267

 Score =  181 bits (458), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 47/266 (17%), Positives = 96/266 (36%), Gaps = 26/266 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +         A +  +  +++N++N +T  F+  K +F +++    +  D       
Sbjct: 1   MMRALYSAALGMKAQQTNVDIISNNLANVNTTAFKKDKAEFKDLLYETLSRADVVAGDGK 60

Query: 54  ----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109
               Q    V       S   G+   T   LD A++G+ +F + +P G   TRDG FKV+
Sbjct: 61  PVSLQIGHGVTISAITKSFAEGNLERTENPLDLAIQGEGFFVVSTPNGPRYTRDGSFKVS 120

Query: 110 DDGSL---VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL------ 160
           +       V++ G   + +  +  +          + E G I+ K +             
Sbjct: 121 NVEGQIKLVTSDGYPVLAEGDTEIVLPETAISSITIDEMGRITYKDQEGQVQDSGLKIKI 180

Query: 161 YSVDMSQGFVRRENSGISPNIP-----PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIH 215
                 QG +    +  + +            +     + +GFLE SN   + EM ++I 
Sbjct: 181 VRFINPQGLLAEGKNLYNVSAASGEPVSEEEMEGQKSRILQGFLEMSNVQVVDEMVKLII 240

Query: 216 LTQKFNSITTLIDENEKSMLEAIRNI 241
             + +   +  I   +  +     N+
Sbjct: 241 AQRAYEINSKAIQTADDML-SIANNL 265


>gi|317153844|ref|YP_004121892.1| flagellar basal-body rod protein FlgG [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316944095|gb|ADU63146.1| flagellar basal-body rod protein FlgG [Desulfovibrio aespoeensis
           Aspo-2]
          Length = 260

 Score =  181 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 47/257 (18%), Positives = 94/257 (36%), Gaps = 18/257 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S        +A++  + T+++N++N +T GF+  + +F +++               
Sbjct: 1   MMRSLWTAATGMVAMQTHIDTLSNNLANVNTTGFKKSRAEFEDLMYQTLQIAGTETQSGG 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107
                 Q    V     +     G F +TG  LD A+EG+ +F ++     + TRDG FK
Sbjct: 61  RLPVGMQVGMGVRPVSVHKFFTQGDFKNTGNPLDIAIEGEGFFLVDMNGEDVYTRDGSFK 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           + ++G +V+A G     +    P  +             +          + +Y      
Sbjct: 121 LDNEGRVVTAGGHVLQPEFTIPPETVSVVITETGHISALDKDGAALAETDIDIYRFQNPA 180

Query: 168 GFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222
           G      +    +              +  T+ + FLE SN   + EM  +I   + +  
Sbjct: 181 GLTAIGRNFYRGSEASGDAVAGTPGDENFGTLAQAFLEGSNVEMVDEMVGLIVGQRAYEI 240

Query: 223 ITTLIDENEKSMLEAIR 239
            +  I  ++  +  AI 
Sbjct: 241 NSKAITTSDGMLQTAIN 257


>gi|332800001|ref|YP_004461500.1| flagellar basal-body rod protein FlgF [Tepidanaerobacter sp. Re1]
 gi|332697736|gb|AEE92193.1| flagellar basal-body rod protein FlgF [Tepidanaerobacter sp. Re1]
          Length = 255

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 54/261 (20%), Positives = 113/261 (43%), Gaps = 25/261 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M      G +  L+   R   +++N++N +T GF+  +  F  +     +  D       
Sbjct: 1   MIRGLYTGASGMLSEMSRTDVISNNLANVNTSGFKKDRAIFRALPEMNIHRFDDPITVGL 60

Query: 56  -------------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTR 102
                         + V   +       G+   T   LD AL G+ +F +++P GI  TR
Sbjct: 61  DRVIDPRPFIGMLGTGVMLDEINTDFSQGAIKVTSNPLDIALRGEGFFEVQTPEGIRYTR 120

Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162
           DG F +  DG +V+  G Y + +       +  ++    + ++GE++  G+ +  + + +
Sbjct: 121 DGSFTIDRDGYIVTKDGYYVLGENG---PMLLPQEGDVVISQQGEVTVSGQFVDRLEIVN 177

Query: 163 VDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222
                  V++ ++  +   P  P +      V +G LE SN N++ EM  +I   + + +
Sbjct: 178 FADQGQVVKQGSNLYNSQAPTVPTD----AEVIQGALEGSNTNTISEMVDLITAFRAYEA 233

Query: 223 ITTLIDENEKSMLEAIRNIAS 243
              +I  +++++  A+ +IAS
Sbjct: 234 SQKVIQTHDETLDRAVNDIAS 254


>gi|332704823|ref|ZP_08424911.1| flagellar basal-body rod protein FlgG [Desulfovibrio africanus str.
           Walvis Bay]
 gi|332554972|gb|EGJ52016.1| flagellar basal-body rod protein FlgG [Desulfovibrio africanus str.
           Walvis Bay]
          Length = 260

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 51/257 (19%), Positives = 95/257 (36%), Gaps = 18/257 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S        +A +  + T+++N++N +T+GF+  + +F +++               
Sbjct: 1   MMRSLWTAATGMVAQQMNIDTISNNLANVNTIGFKKSRAEFEDLMYQTMKIAGTRTEGGN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107
                 Q    V     +     G F +T   LD A+EGD +F ++       TR G FK
Sbjct: 61  VTPVGIQMGMGVRPMTVHKFFTQGDFQNTSNPLDIAIEGDGFFLVDFNGTEAFTRAGAFK 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           + ++G +V+A+G     +    P  +             +          + LY+   + 
Sbjct: 121 LDNEGRMVTANGYLLQPEFTVPPETVNVVISEQGHLAALDRQGNELSSTDLQLYTFQNNA 180

Query: 168 GFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222
           G      +         P    +       T+ +GFLE SN   + EM  MI   + F  
Sbjct: 181 GLNAIGRNLFIETEASGPATAGTPGEENVGTLAQGFLEGSNVELVDEMVGMIIGQRAFEV 240

Query: 223 ITTLIDENEKSMLEAIR 239
            +  I  ++  +  AI 
Sbjct: 241 NSKAISTSDTMLQTAIN 257


>gi|323697472|ref|ZP_08109384.1| flagellar basal-body rod protein FlgG [Desulfovibrio sp. ND132]
 gi|323457404|gb|EGB13269.1| flagellar basal-body rod protein FlgG [Desulfovibrio desulfuricans
           ND132]
          Length = 260

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 51/257 (19%), Positives = 94/257 (36%), Gaps = 18/257 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S        +A++ ++ T+++N++N  T  F+  + +F +++               
Sbjct: 1   MMRSLWTSATGMIAMQTQIDTLSNNLANVSTTAFKKSRAEFEDLMYQTLKIAGGENADGT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107
                 Q    V     +     G F +TG  LD A+EG+ +F +      + TRDG F+
Sbjct: 61  QTPVGMQIGMGVRPVSVHKFFTQGDFQNTGNPLDMAIEGEGFFQVMVNGDEVYTRDGSFE 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           +  DG +V+A G     +    P                +        A + LY      
Sbjct: 121 LDSDGRVVTAGGYPLQPEFTVPPETSSISISETGTISALDKDGTVLATADIDLYRFQNPA 180

Query: 168 GFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222
           G +    +    +            D +  T+ +GFLE SN   + EM  +I   + F  
Sbjct: 181 GLIATGRNFYRESDASGVAVAGTPGDDNYGTIAQGFLEGSNVEMVDEMVGLIVGQRAFEI 240

Query: 223 ITTLIDENEKSMLEAIR 239
            +  I  ++  +  AI 
Sbjct: 241 NSKAITTSDGMLQTAIN 257


>gi|312621332|ref|YP_004022945.1| flagellar basal-body rod protein flgg [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312201799|gb|ADQ45126.1| flagellar basal-body rod protein FlgG [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 267

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 48/266 (18%), Positives = 95/266 (35%), Gaps = 26/266 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +         A +  +  +++N++N +T  F+  K +F +++    +  D       
Sbjct: 1   MMRALYSAALGMKAQQTNVDIISNNLANVNTTAFKKDKAEFKDLLYETLSRADVVAGDGK 60

Query: 54  ----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109
               Q    V       S   G+   T   LD A++G+ +F + +P G   TRDG FKV+
Sbjct: 61  PVSLQIGHGVTISAITKSFAEGNLERTENPLDLAIQGEGFFVVSTPNGPRYTRDGSFKVS 120

Query: 110 DDGSL---VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL------ 160
           +       V++ G   + +  +  I          + E G I+ K               
Sbjct: 121 NVEGQIKLVTSDGYPVLAEGDTEIILPETAISSITIDETGRITYKDAEGQVQDSGLKIKI 180

Query: 161 YSVDMSQGFVRRENSGISPNIP-----PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIH 215
                 QG +    +  + +            +     + +GFLE SN   + EM ++I 
Sbjct: 181 VRFINPQGLLAEGKNLYNVSAASGDPVSEEEMEGQKSRILQGFLEMSNVQVVDEMVKLII 240

Query: 216 LTQKFNSITTLIDENEKSMLEAIRNI 241
             + +   +  I   +  +     N+
Sbjct: 241 AQRAYEINSKAIQTADDML-SMANNL 265


>gi|167038474|ref|YP_001666052.1| flagellar basal body rod protein [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|320116869|ref|YP_004187028.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|166857308|gb|ABY95716.1| flagellar basal body rod protein [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|319929960|gb|ADV80645.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
          Length = 251

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 57/253 (22%), Positives = 106/253 (41%), Gaps = 15/253 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV-----------GAIK 49
           M        +  +   + +  +A+N++N +TVG++   V  S                  
Sbjct: 1   MLRGLYTASSGMITQTKIMDVLANNLANVNTVGYKRDVVVTSPFPNFEVTRHGGDNTPPN 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109
             I      V     + + E G+F  T  +LDFA++G+ +F + +P G   TRDG F ++
Sbjct: 61  GKIGTMDYGVLVDTFHTNFEEGAFSQTNGKLDFAIDGNGFFVVNTPNGQRYTRDGSFTLS 120

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169
            DG LV+  G             I       +V E G I   G+++  + +   D   G 
Sbjct: 121 KDGYLVTQEGYIVE----GENGPIQLSQGDISVDEMGNIINNGQLVDRLRIVDFDNYDGL 176

Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
            +  N+    +         +   +K+GFLE SN NS+ EM  MI + + + S   ++  
Sbjct: 177 RKEGNNLFFIDNSANVQVIPATGKIKQGFLEQSNVNSVKEMVNMISVMRNYESNQKVVIA 236

Query: 230 NEKSMLEAIRNIA 242
            ++++ +A+  + 
Sbjct: 237 FDETLGKAVNEVG 249


>gi|254478074|ref|ZP_05091457.1| conserved domain protein [Carboxydibrachium pacificum DSM 12653]
 gi|214035936|gb|EEB76627.1| conserved domain protein [Carboxydibrachium pacificum DSM 12653]
          Length = 266

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 60/266 (22%), Positives = 103/266 (38%), Gaps = 25/266 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +         A +  +  +A+N++N +T  F+  + +F +++       +       
Sbjct: 1   MMRALWSAATGMTAQQLNVDVIANNLANVNTTAFKRDRAEFKDLIYQTLQRENVYGGQGR 60

Query: 54  ----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKV 108
               Q    V           G+   TG  LD AL+G  +FA+  P   +  TRDG FK+
Sbjct: 61  PVNMQVGVGVRPSAIVKDFSEGNLYQTGNPLDLALDGPGFFAVLGPDDKVYYTRDGSFKL 120

Query: 109 TDDGSLVS--ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK-----VIATMGLY 161
           + DG+ +    +  YPVLD ++ PI          V   G I  K        +AT+G+Y
Sbjct: 121 SPDGNTLMLVTADGYPVLDDSNNPIVFDGNVNDITVSPLGVIQVKNPDGTTQEVATLGIY 180

Query: 162 SVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
           +    QG +   N+                 +     V +GFLE SN   + EM  MI  
Sbjct: 181 NFTNPQGLLSVGNNLYEATEASGQPGTRDDFEGRMGKVMQGFLETSNVQVVKEMVDMIAA 240

Query: 217 TQKFNSITTLIDENEKSMLEAIRNIA 242
            + +   +  I   ++ +     N+ 
Sbjct: 241 QRAYEINSKAIQAADEMLG-IANNLR 265


>gi|114566479|ref|YP_753633.1| flagellar basal-body rod protein FlgG [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
 gi|114337414|gb|ABI68262.1| flagellar basal-body rod protein FlgG [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
          Length = 261

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 46/258 (17%), Positives = 94/258 (36%), Gaps = 19/258 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S     +   A +  + T++ NM+N +TVGF+  +++F +++               
Sbjct: 1   MMRSLYTASSGMYAQQLNIDTLSHNMANVNTVGFKKQRLEFQDLLYQTIRRPAADEDRNE 60

Query: 56  ------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRFK 107
                    V           G+  +T   LD A+ G A+F ++      ++ TRDG FK
Sbjct: 61  PVGLLVGLGVKPAAINTIFNTGNLQATENPLDVAINGTAFFGVKVAGNDELLYTRDGAFK 120

Query: 108 VTDDGSLVSASGKYPVL-DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           +  +G LV+A G                Q      +       +  +    + L+     
Sbjct: 121 IDANGQLVTADGNLLEGAGTFDEGAYDIQIASDGKISYMIPGQETPEEAGQLKLFKFINP 180

Query: 167 QGFVRRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221
            G  +   +                +  + V+++ G+LE SN   + EM  +I   + + 
Sbjct: 181 AGLQKIGKNLYRATPNSGEAEEWQPDSDNSVSLEAGYLEMSNVQIVEEMVNLITAQRAYE 240

Query: 222 SITTLIDENEKSMLEAIR 239
             + +I  +++ +  A  
Sbjct: 241 INSKVIISSDEMLQTAAN 258


>gi|221309506|ref|ZP_03591353.1| flagellar basal body rod protein FlgG [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221313830|ref|ZP_03595635.1| flagellar basal body rod protein FlgG [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221318753|ref|ZP_03600047.1| flagellar basal body rod protein FlgG [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221323025|ref|ZP_03604319.1| flagellar basal body rod protein FlgG [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|255767369|ref|NP_389511.2| flagellar basal body rod protein FlgG [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|321315395|ref|YP_004207682.1| flagellar basal body rod protein FlgG [Bacillus subtilis BSn5]
 gi|239938626|sp|P23446|FLGG_BACSU RecName: Full=Flagellar basal-body rod protein flgG; AltName:
           Full=Distal rod protein
 gi|142919|gb|AAA22444.1| flgG [Bacillus subtilis]
 gi|225184996|emb|CAB13502.2| flagellar hook protein [Bacillus subtilis subsp. subtilis str. 168]
 gi|320021669|gb|ADV96655.1| flagellar basal body rod protein FlgG [Bacillus subtilis BSn5]
          Length = 264

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 62/262 (23%), Positives = 114/262 (43%), Gaps = 24/262 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G++     + +L  + +N++N +TVGF+  +V F ++V               
Sbjct: 1   MLRSLYSGISGMKNFQTKLDVIGNNIANVNTVGFKKSRVTFKDMVSQTIAGGSAAGATIG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
             +  Q     +SG         +  STG  LD A++GD +F +++  G   TR G F +
Sbjct: 61  GTNSKQIGLGSSSGTIDTIHSTSATQSTGRTLDLAIDGDGYFRIDTGDGTAYTRAGNFYL 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ-----KGKVIATMGLYSV 163
            + G+LV+  G +  L+M    I+IP   + F++G  G++S      K +    +G+ + 
Sbjct: 121 DNTGTLVTGDGYHV-LNMNGGTIKIPTDAQSFSIGSDGKVSIVDAEGKTQDGGQIGIVTF 179

Query: 164 DMSQGFVRRENSGI------SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217
             S G  +  ++                  D     +K GFLE SN +   E  +MI   
Sbjct: 180 ANSDGLDKIGSNLYRESLNSGTASAANQPGDGGTGALKSGFLEMSNVDLTDEFTEMIVAQ 239

Query: 218 QKFNSITTLIDENEKSMLEAIR 239
           + F S + +I  +++ + E + 
Sbjct: 240 RGFQSNSKIITTSDEILQELVN 261


>gi|302872712|ref|YP_003841348.1| flagellar basal-body rod protein FlgG [Caldicellulosiruptor
           obsidiansis OB47]
 gi|302575571|gb|ADL43362.1| flagellar basal-body rod protein FlgG [Caldicellulosiruptor
           obsidiansis OB47]
          Length = 267

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 47/266 (17%), Positives = 96/266 (36%), Gaps = 26/266 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +         A +  +  +++N++N +T  F+  K +F +++    +  D       
Sbjct: 1   MMRALYSAALGMKAQQTNVDIISNNLANVNTTAFKKDKAEFKDLLYETLSRADVVAGDGK 60

Query: 54  ----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109
               Q    V       S   G+   T   LD A++G+ +F + +P G   TRDG FKV+
Sbjct: 61  PVSLQIGHGVTISAITKSFAEGNLERTENPLDLAIQGEGFFVVSTPNGPRYTRDGSFKVS 120

Query: 110 DDGSL---VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL------ 160
           +       V++ G   + +  +  +          + E G I+ K +             
Sbjct: 121 NVEGQIKLVTSDGYPVLAEGDTEIVLPETAISSITIDETGRITYKDQEGQIQDSGLKIKI 180

Query: 161 YSVDMSQGFVRRENSGISPNIP-----PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIH 215
                 QG +    +  + +            +     + +GFLE SN   + EM ++I 
Sbjct: 181 VRFINPQGLLAEGKNLYNVSAASGEPVSEEEMEGQKSRILQGFLEMSNVQVVDEMVKLII 240

Query: 216 LTQKFNSITTLIDENEKSMLEAIRNI 241
             + +   +  I   +  +     N+
Sbjct: 241 AQRAYEINSKAIQTADDML-SMANNL 265


>gi|20806699|ref|NP_621870.1| flagellar basal body and hook proteins [Thermoanaerobacter
           tengcongensis MB4]
 gi|20515153|gb|AAM23474.1| Flagellar basal body and hook proteins [Thermoanaerobacter
           tengcongensis MB4]
          Length = 266

 Score =  180 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 55/266 (20%), Positives = 101/266 (37%), Gaps = 25/266 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +         A +  +  +A+N++N +T  F+  + +F +++       +       
Sbjct: 1   MMRALWSAATGMTAQQLNVDVIANNLANVNTTAFKRDRAEFKDLIYQTLQRENVYGGQGR 60

Query: 54  ----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKV 108
               Q    V           G+   TG  LD AL+G  +FA+  P   +  TRDG FK+
Sbjct: 61  PVNMQVGVGVRPSAIVKDFSEGNLYQTGNPLDLALDGPGFFAVLGPDDKVYYTRDGSFKL 120

Query: 109 TDDG---SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG----KVIATMGLY 161
           + DG    LV+A G   + D  +  +     ++I          +      + +AT+G+Y
Sbjct: 121 SPDGNTFMLVTADGYPVLDDSNNPIVFDGNVNDITVSPLGVIQVKNPDGTTQEVATLGIY 180

Query: 162 SVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
           +    QG +   N+                 +     V +GFLE SN   + EM  MI  
Sbjct: 181 NFTNPQGLLSVGNNLYEATEASGQPGTRDDFEGRMGKVMQGFLETSNVQVVKEMVDMIAA 240

Query: 217 TQKFNSITTLIDENEKSMLEAIRNIA 242
            + +   +  I   ++ +     N+ 
Sbjct: 241 QRAYEINSKAIQAADEMLG-IANNLR 265


>gi|39912|emb|CAA39528.1| unnamed protein product [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 264

 Score =  180 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 62/262 (23%), Positives = 114/262 (43%), Gaps = 24/262 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G++     + +L  + +N++N +TVGF+  +V F ++V               
Sbjct: 1   MLRSLYSGISGMKNFQTKLDVIGNNIANVNTVGFKKSRVTFKDMVSQTIAGGSAAGATIG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
             +  Q     +SG         +  STG  LD A++GD +F +++  G   TR G F +
Sbjct: 61  GTNSKQIGLGSSSGTIDTIHSTSATQSTGRTLDLAIDGDGYFRIDTGDGTAYTRAGNFYL 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ-----KGKVIATMGLYSV 163
            + G+LV+  G +  L+M    I+IP   + F++G  G++S      K +    +G+ + 
Sbjct: 121 DNTGTLVTGDGYHV-LNMNGGTIKIPTDAQTFSIGSDGKVSIVDAEGKTQDGGQIGIVTF 179

Query: 164 DMSQGFVRRENSGI------SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217
             S G  +  ++                  D     +K GFLE SN +   E  +MI   
Sbjct: 180 ANSDGLDKIGSNLYRESLNSGTASAANQPGDGGTGALKSGFLEMSNVDLTDEFTEMIVAQ 239

Query: 218 QKFNSITTLIDENEKSMLEAIR 239
           + F S + +I  +++ + E + 
Sbjct: 240 RGFQSNSKIITTSDEILQELVN 261


>gi|300114797|ref|YP_003761372.1| flagellar basal-body rod protein FlgG [Nitrosococcus watsonii
           C-113]
 gi|299540734|gb|ADJ29051.1| flagellar basal-body rod protein FlgG [Nitrosococcus watsonii
           C-113]
          Length = 261

 Score =  180 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 46/261 (17%), Positives = 92/261 (35%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +  I      A + R++T+++N++N +T GF+  +  F +++         +     
Sbjct: 1   MNQALWIAKTGLDAQQTRMATISNNLANVNTTGFKRDRAVFEDLLYQTVRQPGAQSSQNT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    + V +         G    TG  LD A++G  +F +  P   +  TRDG F
Sbjct: 61  LLPSGLMLGTGVRTVATEKLFTQGGLTQTGNSLDMAIQGRGFFQVLMPDGSLAYTRDGTF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           ++  +G LV++SG      +      +         V               + L     
Sbjct: 121 QIDANGQLVTSSGYPVQPGITIPQSALSVTVGSDGIVSVLMPGDGTPVQAGNLQLADFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     N+           +          T+ +G LE +N N + E+  MI   + +
Sbjct: 181 PAGLQPTGNNLFKETAASGVAQTGIPGLNGIGTLVQGALEGANVNVVEELVNMIETQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
              +  I   ++ +  A + +
Sbjct: 241 EMNSKAISSTDEMLRFATQTL 261


>gi|291484181|dbj|BAI85256.1| flagellar basal body rod protein FlgG [Bacillus subtilis subsp.
           natto BEST195]
          Length = 264

 Score =  180 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 62/262 (23%), Positives = 113/262 (43%), Gaps = 24/262 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G++     + +L  + +N++N +TVGF+  +V F ++V               
Sbjct: 1   MLRSLYSGISGMKNFQTKLDVIGNNIANVNTVGFKKSRVTFKDMVSQTIAGGSAAGATIG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
             +  Q     +SG         +  STG  LD A++GD +F +++  G   TR G F +
Sbjct: 61  GTNSKQIGLGSSSGTIDTIHSTSATQSTGRTLDLAIDGDGYFRIDTGDGTAYTRAGNFYL 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ-----KGKVIATMGLYSV 163
            + G+LV+  G +  L+M    I+IP   + F++G  G++S      K +    +G+ + 
Sbjct: 121 DNTGTLVTGDGYHV-LNMNGGTIKIPTDAQSFSIGSDGKVSIVDAEGKTQDGGQIGIVTF 179

Query: 164 DMSQGFVRRENSGI------SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217
             S G  +   +                  D     +K GFLE SN +   E  +MI   
Sbjct: 180 ANSDGLDKIGRNLYRESLNSGTASAANQPGDGGTGALKSGFLEMSNVDLTDEFTEMIVAQ 239

Query: 218 QKFNSITTLIDENEKSMLEAIR 239
           + F S + +I  +++ + E + 
Sbjct: 240 RGFQSNSKIITTSDEILQELVN 261


>gi|77165836|ref|YP_344361.1| hypothetical protein Noc_2373 [Nitrosococcus oceani ATCC 19707]
 gi|254434083|ref|ZP_05047591.1| flagellar basal-body rod protein FlgG [Nitrosococcus oceani AFC27]
 gi|76884150|gb|ABA58831.1| conserved hypothetical protein [Nitrosococcus oceani ATCC 19707]
 gi|207090416|gb|EDZ67687.1| flagellar basal-body rod protein FlgG [Nitrosococcus oceani AFC27]
          Length = 261

 Score =  180 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 46/261 (17%), Positives = 92/261 (35%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +  I      A + R++T+++N++N +T GF+  +  F +++         +     
Sbjct: 1   MNQALWIAKTGLDAQQTRMATISNNLANVNTTGFKRDRAVFEDLLYQTVRQPGAQSSQNT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    + V +         G    TG  LD A++G  +F +  P   +  TRDG F
Sbjct: 61  LLPSGLMLGTGVRTVATEKLFTQGGLTQTGNSLDMAIQGRGFFQILMPDGSLAYTRDGTF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           ++  +G LV++SG      +      +         V               + L     
Sbjct: 121 QIDANGQLVTSSGYPVQPGITIPESALSVTVGSDGIVSVLMAGDGTPIQAGNLQLADFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     N+           +          T+ +G LE +N N + E+  MI   + +
Sbjct: 181 PAGLQPTGNNLFKETASSGVAQTGIPGLNGIGTLVQGALEGANVNVVEELVNMIETQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
              +  I   ++ +  A + +
Sbjct: 241 EMNSKAISSTDEMLRFATQTL 261


>gi|116327820|ref|YP_797540.1| flagellar basal body rod protein FlgG [Leptospira borgpetersenii
           serovar Hardjo-bovis L550]
 gi|116120564|gb|ABJ78607.1| Endoflagellar distal basal body rod protein [Leptospira
           borgpetersenii serovar Hardjo-bovis L550]
          Length = 265

 Score =  180 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 55/262 (20%), Positives = 95/262 (36%), Gaps = 23/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S        +A +  + T+++N++N +T GF+  +  F ++V   +           
Sbjct: 1   MMRSLWTAATGMIAQQFHIDTISNNLANVNTTGFKKNRADFEDLVYQHQVLAGTPATSVS 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGR 105
                      V +       E+GSF +TG +LD A+ G+  F            +RDG 
Sbjct: 61  EIPTGVNVGHGVRAAASQKLFEIGSFQATGNKLDMAITGEMGFFKIQMPDGSFAFSRDGS 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI---SQKGKVIATMGLYS 162
           FK+  +  +V+++G      +      I     I   GE         +  VI  + LY 
Sbjct: 121 FKIDSNQQVVTSNGYLLEPPLILPEGAILNTLMISEQGEVTVKVGADIRPIVIGQVELYR 180

Query: 163 VDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLT 217
                G      +     +   P             V +GFLE SN   + EM  MI   
Sbjct: 181 FVNPAGLQAIGKNLFQETVASGPEIPGTPGMEGFGNVLQGFLEMSNVKIVEEMVAMIVAQ 240

Query: 218 QKFNSITTLIDENEKSMLEAIR 239
           + + S +  I  ++  +  AI 
Sbjct: 241 RAYESNSKAIQTSDNMLSTAIS 262


>gi|323704841|ref|ZP_08116418.1| flagellar basal-body rod protein FlgG [Thermoanaerobacterium
           xylanolyticum LX-11]
 gi|323535767|gb|EGB25541.1| flagellar basal-body rod protein FlgG [Thermoanaerobacterium
           xylanolyticum LX-11]
          Length = 266

 Score =  180 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 57/266 (21%), Positives = 103/266 (38%), Gaps = 25/266 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +     +   A +  +  +++N++N +T  F+  + +F +++       D       
Sbjct: 1   MIRALWSAASGMNAQQLNVDVISNNLANVNTTAFKRDRAEFQDLIYQTLQTEDVNGGQGK 60

Query: 54  ----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFK- 107
               Q    V           GS   T   LD AL+G+ +FA+  P      TRDG FK 
Sbjct: 61  PVNMQVGVGVRPSAIVKDFSEGSLQETDNPLDVALDGEGFFAVLGPDGNTYYTRDGSFKL 120

Query: 108 -VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG-----KVIATMGLY 161
            V  + + ++ +  YPVLD    PI      +  ++   G IS K      + +AT+G+Y
Sbjct: 121 SVDQNTATLTTADGYPVLDDGGNPITFDSTQKDISISPLGVISVKNSDGTQQDVATLGIY 180

Query: 162 SVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
           +     G + + ++                       V++GFLE SN   + EM  MI  
Sbjct: 181 NFQNPDGLLDKGDNLYEATAASGDPGTRDDFQGRMGNVRQGFLETSNVQVVNEMVNMIAA 240

Query: 217 TQKFNSITTLIDENEKSMLEAIRNIA 242
            + +   +  I   +  +     N+ 
Sbjct: 241 QRAYELNSKAIQAADDML-SIANNLR 265


>gi|296330843|ref|ZP_06873318.1| flagellar basal body rod protein FlgG [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305674361|ref|YP_003866033.1| flagellar hook protein [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296151848|gb|EFG92722.1| flagellar basal body rod protein FlgG [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305412605|gb|ADM37724.1| flagellar hook protein [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 264

 Score =  180 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 63/262 (24%), Positives = 116/262 (44%), Gaps = 24/262 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G++     + +L  + +N++N +TVGF+  +V F ++V               
Sbjct: 1   MLRSLYSGISGMKNFQTKLDVIGNNIANVNTVGFKKSRVTFKDMVSQTIAGGSAAGATIG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
             +  Q     +SG         +  STG  LD A++GD +F +++  GI  TR G F +
Sbjct: 61  GTNSKQIGLGSSSGTIDTIHSTSATQSTGRTLDLAIDGDGYFRIDTGDGIAYTRAGNFYL 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ-----KGKVIATMGLYSV 163
            + G+LV+  G +  L+M    IQIP   + F++G  G++S      + +    +G+ + 
Sbjct: 121 DNTGTLVTGDGYHV-LNMNGGTIQIPTDAQSFSIGSDGKVSIVDAGGQTQDGGQIGIVTF 179

Query: 164 DMSQGFVRRENSGI------SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217
             S G  +  ++                  D    ++K GFLE SN +   E  +MI   
Sbjct: 180 ANSDGLDKVGSNLYRESLNSGTASAANQPGDGGTGSLKSGFLEMSNVDLTDEFTEMIVAQ 239

Query: 218 QKFNSITTLIDENEKSMLEAIR 239
           + F S + +I  +++ + E + 
Sbjct: 240 RGFQSNSKIITTSDEILQELVN 261


>gi|312126442|ref|YP_003991316.1| flagellar basal-body rod protein flgg [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311776461|gb|ADQ05947.1| flagellar basal-body rod protein FlgG [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 267

 Score =  180 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 47/266 (17%), Positives = 96/266 (36%), Gaps = 26/266 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +         A +  +  +++N++N +T  F+  K +F +++    +  D       
Sbjct: 1   MMRALYSAALGMKAQQTNVDIISNNLANVNTTAFKKDKAEFKDLLYETLSRADVVAGDGK 60

Query: 54  ----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109
               Q    V       S   G+   T   LD A++G+ +F + +P G   TRDG FKV+
Sbjct: 61  PVSLQIGHGVTISAITKSFAEGNLERTENPLDLAIQGEGFFVVSTPNGPRYTRDGSFKVS 120

Query: 110 DDGSL---VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL------ 160
           +       V++ G   + +  +  +          + E G I+ K +             
Sbjct: 121 NVEGQIKLVTSDGYPVLAEGDTEIVLPETAISSITIDETGRITYKDQDGQIQDSGFKIKI 180

Query: 161 YSVDMSQGFVRRENSGISPNIP-----PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIH 215
                 QG +    +  + +            +     + +GFLE SN   + EM ++I 
Sbjct: 181 VRFINPQGLLAEGKNLYNVSATSGDPVSEEEMEGQKSRILQGFLEMSNVQVVDEMVKLII 240

Query: 216 LTQKFNSITTLIDENEKSMLEAIRNI 241
             + +   +  I   +  +     N+
Sbjct: 241 AQRAYEINSKAIQTADDML-SMANNL 265


>gi|292492365|ref|YP_003527804.1| flagellar basal-body rod protein FlgG [Nitrosococcus halophilus
           Nc4]
 gi|291580960|gb|ADE15417.1| flagellar basal-body rod protein FlgG [Nitrosococcus halophilus
           Nc4]
          Length = 261

 Score =  180 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 46/261 (17%), Positives = 91/261 (34%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +  I      A + R++ +++N++N +T GF+  +  F +++         +     
Sbjct: 1   MNQALWIAKTGLDAQQTRMAVISNNLANVNTTGFKRGRAVFEDLLYQTVRQPGAQSSQNT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    + V +         G    T   LD A++G  +F +  P   +  TRDG F
Sbjct: 61  QLPSGLMLGTGVRTVATEKLFSQGGIAQTENPLDLAIQGRGFFQILMPDGSLAYTRDGTF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           +V  DG LV++SG      +      +         V            +  + L     
Sbjct: 121 QVDADGQLVTSSGYPVEPRITIPEGALSVTVGSDGIVSVLVAGDTAPTQLGNVQLADFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     N+           +          T+ +G LE +N N + E+  MI   + +
Sbjct: 181 PAGLQPIGNNLFKETASSGVAQTGIPGLTGFGTLVQGALEGANVNVVEELVNMIETQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
              +  I   ++ +  A + +
Sbjct: 241 EMNSKAIAGTDEMLQFATQTL 261


>gi|94263287|ref|ZP_01287103.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|94267694|ref|ZP_01290963.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|93451896|gb|EAT02627.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|93456370|gb|EAT06494.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
          Length = 260

 Score =  179 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 90/259 (34%), Gaps = 19/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +   G       + +L T+++N++N +T GF+  + +F ++       +        
Sbjct: 1   MIRALYSGTTGMRGQQLQLDTISNNLANVNTAGFKKSRTQFEDLYYQELRAVGVENIDGG 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107
                 Q    V +         GS   TG++LD A+EG  +F +        TR G F 
Sbjct: 61  QVPSGMQVGLGVKATANQKIFTQGSIHETGSDLDIAIEGKGFFQVLKDGEEFYTRAGNFT 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
              DG +V+ +G     +    P  +        + +  + +Q+      + L+      
Sbjct: 121 RDADGFIVTQNGDRLQPEFQIPPETVSLHIGADGLIQAKDAAQEIIAEDQLTLFDFINPG 180

Query: 168 GFVRRENSGISPN-IPPTPLEDLSGVT----VKRGFLEDSNANSMYEMGQMIHLTQKFNS 222
           G      +          P E   G      + + F E SN     E+  +I   + F  
Sbjct: 181 GLRAEGGNLFRATEASGDPREADPGTEGVGVLLQRFNEVSNVEVTEELVNLIITQRAFEM 240

Query: 223 ITTLIDENEKSMLEAIRNI 241
            +  +   ++ + E    +
Sbjct: 241 NSKSVQTADQLL-EVANTL 258


>gi|216263448|ref|ZP_03435443.1| flagellar basal-body rod protein FlgG [Borrelia afzelii ACA-1]
 gi|215980292|gb|EEC21113.1| flagellar basal-body rod protein FlgG [Borrelia afzelii ACA-1]
          Length = 265

 Score =  179 bits (454), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 49/263 (18%), Positives = 93/263 (35%), Gaps = 23/263 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +     +   A +  + T+A+N+SN +T GF+ I+ +F +++   +N          
Sbjct: 1   MMRALWTAASGMTAQQYNVDTIANNLSNVNTTGFKKIRAEFEDLIYQTQNRAGTPATENT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                                E G   ST    D A+EGD ++ +  P G    TRDG F
Sbjct: 61  LRPLGNQVGHGTKIAATQRIFEQGKMQSTNLLTDVAIEGDGFYKILLPDGTYAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNV---GEKGEISQKGKVIATMGLYSV 163
           K+  +  LV++ G   + ++      I     I        K + S +   +  + +   
Sbjct: 121 KIDSNRELVTSQGYKVLPNIFFPEEYIRDSITISEQGIVSVKIDNSNEPIELGQIEISRF 180

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
               G     ++                       +++G LE SN +   EM  MI   +
Sbjct: 181 VNPAGLSAIGSNLFKETAGSGQEIAGIPGSKGMGKLRQGILEMSNVSIAEEMVTMIVAQR 240

Query: 219 KFNSITTLIDENEKSMLEAIRNI 241
            +   +  I  ++  +     N+
Sbjct: 241 AYEINSKAIQTSDNMLG-IANNL 262


>gi|327398888|ref|YP_004339757.1| flagellar basal-body rod protein FlgG [Hippea maritima DSM 10411]
 gi|327181517|gb|AEA33698.1| flagellar basal-body rod protein FlgG [Hippea maritima DSM 10411]
          Length = 262

 Score =  179 bits (453), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 49/259 (18%), Positives = 94/259 (36%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S         A +  + T+A+N++N +TVGF+  +  F +++  +            
Sbjct: 1   MIRSLWTAATGMEAQQLNVDTIANNLANVNTVGFKRSRADFEDLLYQMVRQPGVASTANT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q    V       +   G+F  TG  LD A+ G  +F ++ P      TR G F
Sbjct: 61  VEPTGIQIGLGVKPAAVVKNFSQGNFKETGNPLDIAIAGHGFFQIQMPDGTTAYTRSGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQI-PQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           K+ ++G +V++ G   +  +      +         V       Q    I  + L     
Sbjct: 121 KIDNNGRIVNSEGYPLIPQITIPNDTVAINIGNDGTVSVLEAGQQTPSQIGQIQLAYFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++              +       T+++G LE SN + + EM +MI   + +
Sbjct: 181 PAGLKAIGHNLYQETTASGTATVDNPGSNGLGTLEQGVLEMSNVSVVQEMVEMIAAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
            +    I  +++ +  A  
Sbjct: 241 ETNAKAIQTSDEMLQTANN 259


>gi|298529926|ref|ZP_07017328.1| flagellar basal-body rod protein FlgG [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298509300|gb|EFI33204.1| flagellar basal-body rod protein FlgG [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 260

 Score =  179 bits (453), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 87/259 (33%), Gaps = 19/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S         A +  +   ++N++N +T GF+  + +F +++         +     
Sbjct: 1   MMRSLWTAATGMAAQQMNIDVTSNNLANVNTDGFKKSQAQFEDLMYQTLKVAGTENLTGD 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107
                            +     G +  TG  LD  +EGD +F + +   +  TR G FK
Sbjct: 61  RVPTGLQVGMGTNPLSVHKIFTQGDYKQTGNPLDLTIEGDGFFQVMANDEVRYTRAGSFK 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
              DG +V+A+G     +            +        +          + +Y      
Sbjct: 121 PDQDGRIVTANGYPLQPEFHIPEDTARVHVDEQGNIVCVDGDDNVIAEGEIPIYRFMNPA 180

Query: 168 GFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222
           G      +  S      P  +      +  +++ G LE SN   + EM  MI   + +  
Sbjct: 181 GLNSAGRNLYSETEASGPATEGVPGEENFGSIRSGALESSNVEIVDEMVNMIIGQRAYEI 240

Query: 223 ITTLIDENEKSMLEAIRNI 241
            +  I  +++ + +    +
Sbjct: 241 NSKAIQTSDQML-QMANQM 258


>gi|239817163|ref|YP_002946073.1| flagellar basal-body rod protein FlgG [Variovorax paradoxus S110]
 gi|239803740|gb|ACS20807.1| flagellar basal-body rod protein FlgG [Variovorax paradoxus S110]
          Length = 260

 Score =  179 bits (453), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 85/259 (32%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A + +L  V++N++N  T GF+  +  F +++      +        
Sbjct: 1   MMRSLYIAKTGLDAQQTQLDVVSNNLANVGTTGFKRSRAVFEDLMYQNLRQVGGQTSDQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+   T    D A+ G  +F +  P      TRDG F
Sbjct: 61  RLPSGLQVGTGVHVVATERIHSQGNLTKTDKPTDVAINGGGFFQVLMPDGTTAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +   DG LV+ASG      +                V            +  + L +   
Sbjct: 121 QTDRDGQLVTASGFPVQPAITLPANATSLTIGRDGIVSITQAGQTNTVQVGQLQLATFLN 180

Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   +  +  +                    + +G++E SN N + E+  MI   + +
Sbjct: 181 PAGLQSKGENLYAETDASGAPNQVNPGIDGAGILSQGYVEASNVNVVEELVNMIATQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ +    +
Sbjct: 241 EINSKAVQTSDQMLQRLAQ 259


>gi|307266107|ref|ZP_07547652.1| flagellar basal-body rod protein FlgG [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|306918889|gb|EFN49118.1| flagellar basal-body rod protein FlgG [Thermoanaerobacter wiegelii
           Rt8.B1]
          Length = 266

 Score =  179 bits (453), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 61/266 (22%), Positives = 106/266 (39%), Gaps = 25/266 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +         A +  +  +A+N++N +T  F+  + +F +++       +       
Sbjct: 1   MMRALWSVATGMTAQQLNVDVIANNLANVNTTAFKRDRAEFKDLIYQTLQRENVYGGQGK 60

Query: 54  ----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKV 108
               Q    V           GS   T   LD AL+G+ +FA+  P   +  TRDG FK+
Sbjct: 61  PVNMQVGVGVRPSAIVKDFTEGSLQQTENPLDLALDGEGFFAVLGPDDKVYYTRDGSFKL 120

Query: 109 TDDGSLVS--ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK-----VIATMGLY 161
           + DG+ +    +  YPVLD +  PI     ++  +V   G IS K        +AT+G+Y
Sbjct: 121 SADGNTLMLVTADGYPVLDDSGNPIVFDSTEKDISVSPMGVISVKNPDGTTQEVATLGIY 180

Query: 162 SVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
           +    QG +   ++   P                   V +GFLE SN   + EM  MI  
Sbjct: 181 NFVNPQGLLSVGSNLYEPTEASGQPGTRDDFQGRMGKVMQGFLETSNVQVVKEMVDMIAA 240

Query: 217 TQKFNSITTLIDENEKSMLEAIRNIA 242
            + +   +  I   ++ +     N+ 
Sbjct: 241 QRAYEINSKAIQAADEMLG-IANNLR 265


>gi|218249434|ref|YP_002375273.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi ZS7]
 gi|218164622|gb|ACK74683.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi ZS7]
          Length = 265

 Score =  178 bits (452), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 49/263 (18%), Positives = 92/263 (34%), Gaps = 23/263 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +     +   A +  + T+A+N+SN +T GF+ I+ +F +++    N          
Sbjct: 1   MMRALWTAASGMTAQQYNVDTIANNLSNVNTTGFKKIRAEFEDLIYQTHNRAGTPATENT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                                E G   ST    D A+EGD ++ +  P G    TRDG F
Sbjct: 61  LRPLGNQVGHGTKIAATQRIFEQGKMQSTNLLTDVAIEGDGFYKILLPDGTYAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNV---GEKGEISQKGKVIATMGLYSV 163
           K+  +  LV++ G   + ++      I     I        K + S +   +  + +   
Sbjct: 121 KIDSNRELVTSQGYKVLPNILFPEEYIQNSITISKEGIVSVKIDTSNEPIELGQIEISRF 180

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
               G     ++                       +++G LE SN +   EM  MI   +
Sbjct: 181 INPAGLSAIGSNLFKETAGSGQEIAGIPGSEGMGRLRQGILEMSNVSIAEEMVTMIVAQR 240

Query: 219 KFNSITTLIDENEKSMLEAIRNI 241
            +   +  I  ++  +     N+
Sbjct: 241 AYEINSKAIQTSDNMLG-IANNL 262


>gi|118581849|ref|YP_903099.1| flagellar basal body rod protein FlgG [Pelobacter propionicus DSM
           2379]
 gi|118504559|gb|ABL01042.1| flagellar basal-body rod protein FlgG [Pelobacter propionicus DSM
           2379]
          Length = 262

 Score =  178 bits (452), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 48/259 (18%), Positives = 87/259 (33%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +     +   A ++ +  VA N++N +T GF+  +  F +++   +           
Sbjct: 1   MMRALWTAASGMQAQQKNIDVVAHNLANVNTTGFKRSRADFEDLIYQNQRSTGSPATNTT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q                G F  TG ELD A+EGD +F ++ P      +R G F
Sbjct: 61  QVPTGIQIGLGTRLASVSKLFTTGDFSQTGNELDIAIEGDGFFQIQMPDGTTAYSRAGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           K  D G +V+ +G   + ++                V            + T+ L     
Sbjct: 121 KKDDQGRIVTPNGDPLLPEIVIPNNTTKIDIGSDGTVSATQSGQTTPTTVGTIQLALFAN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +              +       TV +G LE SN +   EM  MI   + +
Sbjct: 181 PAGLFSMGKNLYKETDSSGTPTTGTPGQDGLGTVAQGMLEMSNVSVAEEMVNMIIGQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
            + +  +   ++ +  A  
Sbjct: 241 EANSKAVQAADEMLQTANN 259


>gi|82702455|ref|YP_412021.1| hypothetical protein Nmul_A1326 [Nitrosospira multiformis ATCC
           25196]
 gi|82410520|gb|ABB74629.1| conserved hypothetical protein [Nitrosospira multiformis ATCC
           25196]
          Length = 260

 Score =  178 bits (452), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 90/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A + ++  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MIRSLWISKTGLDAQQTQMDVIANNLANVSTNGFKRSRAVFEDLLYQTLRQPGAQSSQQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+   TG   D A++G  +F +  P      TRDG F
Sbjct: 61  QLPSGLQLGTGVRPVATEHIFTQGNLQQTGNSKDVAIQGQGFFQVLRPDGSTAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +   +G LV++SG +    +   P            V    + S     +  + L +   
Sbjct: 121 QTDFEGQLVTSSGYHVQPAITIPPNAQSITVGRDGIVSVTTQDSTTPVQVGNLQLATFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +              +  T     + +G++E SN N + E+  MI   + +
Sbjct: 181 PAGLQSVGENLYVETASSGTPNVTNPGTDGAGLLNQGYVETSNVNVVEELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ +    +
Sbjct: 241 EINSKSVQTSDQMLQRLTQ 259


>gi|220932495|ref|YP_002509403.1| flagellar basal body rod protein [Halothermothrix orenii H 168]
 gi|219993805|gb|ACL70408.1| flagellar basal body rod protein [Halothermothrix orenii H 168]
          Length = 248

 Score =  178 bits (452), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 56/250 (22%), Positives = 111/250 (44%), Gaps = 13/250 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTI---KVKFSEVVGA-----IKNDI 52
           M        ++ +  ++++  VA+N++N +T G++     +V F EV  +         +
Sbjct: 1   MIKGIYTAASSMVTNQRKMKLVANNLANVNTAGYKRDEGIQVSFPEVFISRLEKGQATPL 60

Query: 53  DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDG 112
            +  + V   ++Y     G    TG  LD A++G+ +F +E+PRG   TR+G F V + G
Sbjct: 61  GELGTGVKIEEDYTDFREGQMNHTGNPLDVAIDGNGFFVVETPRGRRYTRNGNFTVNEQG 120

Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172
            +V+  G  PVL        I  ++    +   G++         + +   +  QG  + 
Sbjct: 121 QIVTQQGY-PVLGERGPLQTIRGRNIS--INTDGQLYLDNLEGDRLLIVDFENRQGLRKI 177

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
             +              S   +K+G+LE SN N + EM +MI + + F     +I   ++
Sbjct: 178 GENLYV--NEGIREIQASDYQIKQGYLETSNVNIVKEMVRMIEVNRAFEVNQKVIKNADQ 235

Query: 233 SMLEAIRNIA 242
           ++ +A+ N+ 
Sbjct: 236 TLSKAVNNVG 245


>gi|111115606|ref|YP_710224.1| flagellar basal body rod protein FlgG [Borrelia afzelii PKo]
 gi|110890880|gb|ABH02048.1| flagellar basal-body rod protein [Borrelia afzelii PKo]
          Length = 265

 Score =  178 bits (452), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 49/263 (18%), Positives = 93/263 (35%), Gaps = 23/263 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +     +   A +  + T+A+N+SN +T GF+ I+ +F +++   +N          
Sbjct: 1   MMRALWTAASGMTAQQYNVDTIANNLSNVNTTGFKKIRAEFEDLIYQTQNRAGTPATENT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                                E G   ST    D A+EGD ++ +  P G    TRDG F
Sbjct: 61  LRPLGNQVGHGTKIAATQRIFEQGKMQSTNLLTDVAIEGDGFYKILLPDGTYAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNV---GEKGEISQKGKVIATMGLYSV 163
           K+  +  LV++ G   + ++      I     I        K + S +   +  + +   
Sbjct: 121 KIDSNRELVTSQGYKVLPNIFFPEEYIRNSITISEQGIVSVKIDNSNEPIELGQIEISRF 180

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
               G     ++                       +++G LE SN +   EM  MI   +
Sbjct: 181 VNPAGLSAIGSNLFKETAGSGQEIAGIPGSKGMGKLRQGILEMSNVSIAEEMVTMIVAQR 240

Query: 219 KFNSITTLIDENEKSMLEAIRNI 241
            +   +  I  ++  +     N+
Sbjct: 241 AYEINSKAIQTSDNMLG-IANNL 262


>gi|85859196|ref|YP_461398.1| flagellar basal-body rod protein [Syntrophus aciditrophicus SB]
 gi|85722287|gb|ABC77230.1| flagellar basal-body rod protein [Syntrophus aciditrophicus SB]
          Length = 260

 Score =  178 bits (452), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 53/260 (20%), Positives = 93/260 (35%), Gaps = 21/260 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S         A +     VA+N++N +TVGF+  +  F +++  +      +     
Sbjct: 1   MIRSLWTAATGMQAQQVEQDVVANNLANVNTVGFKKSRADFQDLMYQLSTKAGSETSSGN 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107
                      V           G +  TG   D+A+EGD +F L+     + TR G FK
Sbjct: 61  QLTVGIEIGMGVKPVATQKIFSQGDYQQTGNSFDWAIEGDGFFQLDDNGTTVYTRAGNFK 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           V  DG L +  G   + +++     +    +        + +        + L       
Sbjct: 121 VNRDGVLCNTDGLQLIPEVSIPQDAVTFTLDSGGTWTAADENGNTLATGRIELAKFINPA 180

Query: 168 GF------VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221
           G       +  +  G    +   P ED    T  + FLE SN N + EM +MI   + + 
Sbjct: 181 GLSSIGRNLFEKTEGSGEPLTGNPGEDG-LGTTSQRFLEMSNVNVIDEMVKMIVGQRAYE 239

Query: 222 SITTLIDENEKSMLEAIRNI 241
             +  I   +  +   I N+
Sbjct: 240 INSKSIVTADNML-SMINNL 258


>gi|294828153|ref|NP_712848.2| flagellar basal body rod protein FlgG [Leptospira interrogans
           serovar Lai str. 56601]
 gi|293386000|gb|AAN49866.2| endoflagellar distal basal body rod protein [Leptospira interrogans
           serovar Lai str. 56601]
          Length = 264

 Score =  178 bits (452), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 55/261 (21%), Positives = 94/261 (36%), Gaps = 23/261 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55
             S        +A +  + T+++N++N +T GF+  +  F ++V   +            
Sbjct: 1   MRSLWTAATGMIAQQFHIDTISNNLANVNTTGFKKNRADFEDLVYQHQVLAGTPATSVSE 60

Query: 56  -------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRF 106
                     V +       E+GSF +TG +LD A+ G+  F            TRDG F
Sbjct: 61  IPTGVNVGHGVRAAASQKLFEIGSFQATGNKLDMAITGEMGFFKIQMPDGSFAFTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI---SQKGKVIATMGLYSV 163
           K+  +  +V+++G      +      I     I   GE         +  VI  + LY  
Sbjct: 121 KIDSNQQVVTSNGYLLEPPLILPEGAILNTLMISEQGEVTVKVGADIRPIVIGQVELYRF 180

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
               G      +     +   P             V +GFLE SN   + EM  MI   +
Sbjct: 181 VNPAGLQAIGKNLFQETVASGPEIPGTPGMEGFGNVLQGFLEMSNVKIVEEMVAMIVAQR 240

Query: 219 KFNSITTLIDENEKSMLEAIR 239
            + S +  I  ++  +  AI 
Sbjct: 241 AYESNSKAIQTSDNMLSTAIS 261


>gi|15595119|ref|NP_212908.1| flagellar basal body rod protein FlgG [Borrelia burgdorferi B31]
 gi|195941595|ref|ZP_03086977.1| flagellar basal body rod protein FlgG [Borrelia burgdorferi 80a]
 gi|216264940|ref|ZP_03436932.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi 156a]
 gi|221217835|ref|ZP_03589302.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi 72a]
 gi|223889350|ref|ZP_03623936.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi 64b]
 gi|224532949|ref|ZP_03673558.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi
           WI91-23]
 gi|224533277|ref|ZP_03673871.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi
           CA-11.2a]
 gi|225548956|ref|ZP_03769933.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi 94a]
 gi|225549893|ref|ZP_03770854.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi 118a]
 gi|226320636|ref|ZP_03796195.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi 29805]
 gi|226321474|ref|ZP_03797001.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi Bol26]
 gi|3913655|sp|O51715|FLGG_BORBU RecName: Full=Flagellar basal-body rod protein flgG; AltName:
           Full=Distal rod protein
 gi|2688724|gb|AAC67132.1| flagellar basal-body rod protein (flgG) [Borrelia burgdorferi B31]
 gi|215981413|gb|EEC22220.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi 156a]
 gi|221192141|gb|EEE18361.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi 72a]
 gi|223885036|gb|EEF56140.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi 64b]
 gi|224512113|gb|EEF82505.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi
           WI91-23]
 gi|224513442|gb|EEF83799.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi
           CA-11.2a]
 gi|225369352|gb|EEG98804.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi 118a]
 gi|225370559|gb|EEG99995.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi 94a]
 gi|226233270|gb|EEH32022.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi Bol26]
 gi|226233959|gb|EEH32681.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi 29805]
 gi|312149206|gb|ADQ29277.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi N40]
          Length = 265

 Score =  178 bits (452), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 50/263 (19%), Positives = 93/263 (35%), Gaps = 23/263 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +     +   A +  + T+A+N+SN +T GF+ I+ +F +++    N          
Sbjct: 1   MMRALWTAASGMTAQQYNVDTIANNLSNVNTTGFKKIRAEFEDLIYQTHNRAGTPATENT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                                E G   ST    D A+EGD ++ +  P G    TRDG F
Sbjct: 61  LRPLGNQVGHGTKIAATQRIFEQGKMQSTNLLTDVAIEGDGFYKILLPDGTYAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF---NVGEKGEISQKGKVIATMGLYSV 163
           K+  +  LV++ G   + ++      I     I     V  K + S +   +  + +   
Sbjct: 121 KIDSNRELVTSQGYKVLPNILFPEEYIQNSITISEEGIVSVKIDTSNEPIELGQIEISRF 180

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
               G     ++                       +++G LE SN +   EM  MI   +
Sbjct: 181 INPAGLSAIGSNLFKETAGSGQEIAGIPGSEGMGRLRQGILEMSNVSIAEEMVTMIVAQR 240

Query: 219 KFNSITTLIDENEKSMLEAIRNI 241
            +   +  I  ++  +     N+
Sbjct: 241 AYEINSKAIQTSDNMLG-IANNL 262


>gi|222530298|ref|YP_002574180.1| flagellar basal-body rod protein FlgG [Caldicellulosiruptor bescii
           DSM 6725]
 gi|222457145|gb|ACM61407.1| flagellar basal-body rod protein FlgG [Caldicellulosiruptor bescii
           DSM 6725]
          Length = 267

 Score =  178 bits (451), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 47/266 (17%), Positives = 96/266 (36%), Gaps = 26/266 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +         A +  +  +++N++N +T  F+  K +F +++    +  D       
Sbjct: 1   MMRALYSAALGMKAQQTNVDIISNNLANVNTTAFKKDKAEFKDLLYETLSRADVVAGDGK 60

Query: 54  ----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109
               Q    V       S   G+   T   LD A++G+ +F + +P G   TRDG FKV+
Sbjct: 61  PVSLQIGHGVTISAITKSFAEGNLERTENPLDLAIQGEGFFVVSTPNGPRYTRDGSFKVS 120

Query: 110 DDGSL---VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL------ 160
           +       V++ G   + +  +  +          + E G I+ K +             
Sbjct: 121 NVEGQIKLVTSDGYPVLAEGDTEIVLPETAISSITIDETGRITYKDQDGQIQDSGFKIKI 180

Query: 161 YSVDMSQGFVRRENSGISPNIP-----PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIH 215
                 QG +    +  + +            +     + +GFLE SN   + EM ++I 
Sbjct: 181 VRFINPQGLLAEGKNLYNVSAASGDPMSEEEMEGQKSRILQGFLEMSNVQVVDEMVKLII 240

Query: 216 LTQKFNSITTLIDENEKSMLEAIRNI 241
             + +   +  I   +  +     N+
Sbjct: 241 AQRAYEINSKAIQTADDML-SMANNL 265


>gi|114330363|ref|YP_746585.1| flagellar basal body rod protein FlgG [Nitrosomonas eutropha C91]
 gi|114307377|gb|ABI58620.1| flagellar basal-body rod protein FlgG [Nitrosomonas eutropha C91]
          Length = 260

 Score =  178 bits (451), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 52/259 (20%), Positives = 94/259 (36%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A + ++  +A+N++N  T GF+ ++  F +++               
Sbjct: 1   MVRSLWISKTGLDAQQTKMDVIANNLANISTNGFKRMRPVFEDLLYQTIRQPGAQSSERT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           G+   TG   D A++G+ +F +  P G    TRDG F
Sbjct: 61  RLPSGLQLGTGVRPVATENIFLQGNLQQTGNTRDVAIQGEGFFQILLPDGTLAYTRDGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +   DG LV+ASG      +   P  +         V      S     +  + L S   
Sbjct: 121 QSDQDGQLVTASGFPLQPSITIPPNTLSITIGRDGTVSVLTPGSATPLPVGNIQLTSFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G  R   +     +           T     + +GF+E SN N + E+ +MI   + +
Sbjct: 181 PAGLQRFGENLYLETMSSGVPNPGIPGTNGIGLLNQGFVETSNVNVVEELVEMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  I  +++ +    +
Sbjct: 241 EINSRSIQTSDQMLSRLTQ 259


>gi|147678402|ref|YP_001212617.1| flagellar hook protein FlgE [Pelotomaculum thermopropionicum SI]
 gi|146274499|dbj|BAF60248.1| flagellar hook protein FlgE [Pelotomaculum thermopropionicum SI]
          Length = 264

 Score =  178 bits (451), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 51/264 (19%), Positives = 99/264 (37%), Gaps = 23/264 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDI----- 52
           M        A    L+ R+ +V++N++N  T G++   +    F E++   +  I     
Sbjct: 1   MIRGLYSAAAGMDVLQARVESVSNNLANASTPGYKREDITIRSFPEMLLIRQGGIQRKPA 60

Query: 53  ------DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-----LT 101
                     + V   + ++    G    TG   D A++G A+FA+ +P          T
Sbjct: 61  GTPEAIGTASNGVLLSELFIDHTQGDLRETGDPADVAIKGPAFFAVSAPGPESPDRVCYT 120

Query: 102 RDGRFKVTDDGSLVSASGKYPVL--DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG 159
           R+G FK+  +G LV+A G   +       +           ++   G +   G     + 
Sbjct: 121 RNGAFKIDQEGYLVTAGGYRVLGEDGEIRIEDFQLNDPARLSISPDGSVRIDGMEAGRLM 180

Query: 160 LYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
           L   D      +          P          +V +G+LE  N N + EM  +I  T+ 
Sbjct: 181 LVEFDDVNSLQKVGEGLFE--DPQGTGRPAVSSSVCQGYLEAPNVNVVDEMVSLITATRA 238

Query: 220 FNSITTLIDENEKSMLEAIRNIAS 243
           + +   +I   ++ + +A+  + S
Sbjct: 239 YEANQRIIQSQDELLAKAVNQVGS 262


>gi|307546966|ref|YP_003899445.1| flagellar basal body rod protein FlgG [Halomonas elongata DSM 2581]
 gi|307218990|emb|CBV44260.1| flagellar basal body rod protein FlgG [Halomonas elongata DSM 2581]
          Length = 260

 Score =  178 bits (451), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 91/259 (35%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S         + + +L  +++N++N +T GF+  +  F +++               
Sbjct: 1   MINSLWTAKTGLESQQVKLDVISNNLANVNTNGFKRSRAVFEDLLYQNLRQPGAQNNVQN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G   +TG   D A+ G  +F +  P      TRDG F
Sbjct: 61  RLPSGMQVGTGVRPVATERLHTQGGLENTGNSRDLAINGKGFFQVRMPDGTTAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           ++ ++G +V+A+G      +      +     E   V      S +   +  + + S   
Sbjct: 121 QLDENGQMVTANGYPLEPAIIIPQNALSVSIGEDGIVSITEPGSSESNEVGQISVSSFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +         P  +          + +G++E SN N + EM  MI   + +
Sbjct: 181 PTGLESIGGNLYRETTASGPRNEGIPGMNGAGRLSQGYVETSNVNVVEEMVGMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ +    +
Sbjct: 241 EINSKAVQTSDEMLARLTQ 259


>gi|157363239|ref|YP_001470006.1| flagellar basal-body rod protein FlgG [Thermotoga lettingae TMO]
 gi|157313843|gb|ABV32942.1| flagellar basal-body rod protein FlgG [Thermotoga lettingae TMO]
          Length = 261

 Score =  178 bits (451), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 45/255 (17%), Positives = 93/255 (36%), Gaps = 19/255 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S         A + +L T+++N++N DT G++ ++ +F ++V     +         
Sbjct: 1   MMVSLYSAATGMWAQQYKLDTISNNLANVDTTGYKKVRAEFQDLVYQYYKNAGTPTAVNS 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRF 106
                                 +G+   TG  LD A+ GD +F ++        TRDG F
Sbjct: 61  TIPTGIYFGHGTRLSATTKIFSLGNMEYTGNALDVAITGDGFFQVQLQDGRTAYTRDGTF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           KV  +G +V+++G   + ++      +        +          + + T+ L      
Sbjct: 121 KVDSEGRVVTSNGLALIPNIVVPADAVAINISPDGIFSAEMQDGTVQNLGTITLVRFVNP 180

Query: 167 QGFVRRENSGI-SPNIPPTPLE----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221
            G     ++          P+E          +++G+LE +N + + EM  MI   + + 
Sbjct: 181 SGLKAVGDNLYLETTASGEPIEGTPNQDGFGALQQGYLEKANVDVVKEMVDMITAQRAYE 240

Query: 222 SITTLIDENEKSMLE 236
                I   +  +  
Sbjct: 241 LNARAIQTADNMLQT 255


>gi|183220919|ref|YP_001838915.1| flagellar basal body rod protein FlgG [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
 gi|189911015|ref|YP_001962570.1| flagellar basal body rod protein FlgG [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Ames)']
 gi|167775691|gb|ABZ93992.1| Endoflagellar distal basal body rod protein [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Ames)']
 gi|167779341|gb|ABZ97639.1| Flagellar basal-body rod protein FlgG (Distal rod protein)
           [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Paris)']
          Length = 265

 Score =  178 bits (451), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 60/261 (22%), Positives = 101/261 (38%), Gaps = 23/261 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S   G    +A +  + TVA+N++N +T GF+  +V F ++V   +           
Sbjct: 1   MMRSLWTGATGMIAQQFHIDTVANNLANVNTTGFKKNRVDFEDLVYQHQVLAGTPATSVS 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDA-WFALESPRGII-LTRDGR 105
                      V         E+GSF +TG +LD AL G+  +F ++ P G    +RDG 
Sbjct: 61  EIPTGVNVGHGVKVAATQKLFEIGSFQATGNKLDLALTGEMAFFKIQMPDGTFSYSRDGS 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE---KGEISQKGKVIATMGLYS 162
           FK+  +  +V+++G      +      I     +   GE   K     +   I  + LY 
Sbjct: 121 FKIDSNQQVVTSNGYLLEPPIILPENAILNTLMVSEEGEVTVKIGNDIRPTTIGQLELYR 180

Query: 163 VDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLT 217
                G      +     +                +V +GFLE SN   + EM  MI   
Sbjct: 181 FVNPAGLQAVGKNLFRETVASGQEIPGMPSQEGYGSVLQGFLEMSNVKIVEEMVNMIVAQ 240

Query: 218 QKFNSITTLIDENEKSMLEAI 238
           + + S +  I  ++  +  AI
Sbjct: 241 RAYESNSKTIQTSDNMLSTAI 261


>gi|326389273|ref|ZP_08210841.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter
           ethanolicus JW 200]
 gi|325994636|gb|EGD53060.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter
           ethanolicus JW 200]
          Length = 251

 Score =  178 bits (451), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 56/253 (22%), Positives = 106/253 (41%), Gaps = 15/253 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV-----------GAIK 49
           M        +  +   + +  + +N++N +TVG++   V  S                  
Sbjct: 1   MLRGLYTASSGMITQTKIMDVLVNNLANVNTVGYKRDVVVTSSFPNFEVTRHGGDNTPPN 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109
             I +    V     + + E G+F  T  +LDFA++G+ +F + +P G   TRDG F ++
Sbjct: 61  GKIGRMDYGVLVDTFHTNFEEGAFSQTNGKLDFAIDGNGFFVVNTPNGQRYTRDGSFTLS 120

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169
            DG LV+  G             I       +V E G I   G+++  + +   D   G 
Sbjct: 121 KDGYLVTQEGYIVE----GENGPIQLSQGDISVDEMGNIINNGQLVDRLRIVDFDNYDGL 176

Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
            +  N+    +         +   +K+GFLE SN NS+ EM  MI + + + S   ++  
Sbjct: 177 RKEGNNLFFIDNSANVQVIPATGKIKQGFLEQSNVNSVKEMVNMISVMRNYESNQKVVIA 236

Query: 230 NEKSMLEAIRNIA 242
            ++++ +A+  + 
Sbjct: 237 FDETLGKAVNEVG 249


>gi|296134368|ref|YP_003641615.1| flagellar basal-body rod protein FlgF [Thermincola sp. JR]
 gi|296032946|gb|ADG83714.1| flagellar basal-body rod protein FlgF [Thermincola potens JR]
          Length = 251

 Score =  178 bits (451), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 57/256 (22%), Positives = 107/256 (41%), Gaps = 22/256 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS---EVVGAIKNDIDQK-- 55
           M        A  LA   R    A+N++N +T G++     F    E++       D    
Sbjct: 1   MIRGLYTSAAGMLAESARNDVAANNLANVNTTGYKKDAAVFKSFPEMLIQRMEKPDNPAQ 60

Query: 56  ---------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106
                     + V   +       G    T   LD A+ GD +F +++P G   TR+G F
Sbjct: 61  LKPEKVGWLGTGVIVDEVITIHTQGQLKETTNPLDMAISGDGYFVIQTPAGERYTRNGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
            +  +G LV++ G Y +        +I   +    V ++G IS  G+VI T+ + S +  
Sbjct: 121 TLDSEGYLVTSEGNYVL----GQRGRIRIGNNDIVVDKQGNISANGQVIDTLRIVSFNDP 176

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
              V++ +S  +               + +  LE SN N + EM  +I + + + +   +
Sbjct: 177 NRLVKQGDSLFA----GGQPVAGFNGQIMQKALETSNVNPVQEMVDLITIMRAYEANQKM 232

Query: 227 IDENEKSMLEAIRNIA 242
           I  +++++ +AI ++A
Sbjct: 233 IQAHDQTLGQAINDVA 248


>gi|254445900|ref|ZP_05059376.1| flagellar basal-body rod protein FlgG [Verrucomicrobiae bacterium
           DG1235]
 gi|198260208|gb|EDY84516.1| flagellar basal-body rod protein FlgG [Verrucomicrobiae bacterium
           DG1235]
          Length = 260

 Score =  178 bits (451), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 48/257 (18%), Positives = 88/257 (34%), Gaps = 18/257 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S     +   A +  L+ +++N++N  T GF+  KV+F ++   +   +        
Sbjct: 1   MSISLYSAASGMEAQQTNLNVISNNIANVSTTGFKKSKVEFQDMFYQVPKSVGADSGGNI 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFK 107
                Q  +             G    TG +LD A+ GD +F +  P    + TRDG FK
Sbjct: 61  LPTGIQVGTGTQVVSTSKVFTQGQVSQTGEQLDVAIVGDGFFRVTGPDNETLYTRDGAFK 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           V   G + ++ G   +   A                              +       S 
Sbjct: 121 VGPTGEVTNSQGMTAIDFAAPPAGTTKVVINDTGGVTYLADDSDVLGRGQLQTARFRNSS 180

Query: 168 GFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222
           G +    +              +       T+++G+LE SN N + EM  MI   + +  
Sbjct: 181 GLLALGGNLFRETDASGAPTVGNPGADGSGTLQQGYLETSNVNIVEEMVNMILAQRAYEI 240

Query: 223 ITTLIDENEKSMLEAIR 239
            +  I  ++  M +  +
Sbjct: 241 NSKSIQTSDSMMQQVAQ 257


>gi|288574697|ref|ZP_06393054.1| flagellar basal-body rod protein FlgG [Dethiosulfovibrio
           peptidovorans DSM 11002]
 gi|288570438|gb|EFC91995.1| flagellar basal-body rod protein FlgG [Dethiosulfovibrio
           peptidovorans DSM 11002]
          Length = 262

 Score =  178 bits (450), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 43/257 (16%), Positives = 94/257 (36%), Gaps = 20/257 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  S   G    +A +  L   ++N++N +TVG++ ++  F++++  I  +    +    
Sbjct: 1   MIRSLWTGATGMVAQQTNLDVTSNNLANVNTVGYKKVRTNFADLLYQINREPGSPVEGGT 60

Query: 61  SGKEYLS-------------KEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
           +    +                 GS+  T   L+ A+EG+A+F +  P   I  + +G +
Sbjct: 61  TVPTGIQVGLGARVNGTSRITTPGSYEVTDAPLNVAIEGNAYFQVVLPNGDIAYSANGEW 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           +   DG +V++ G      +                V        + + I  + L     
Sbjct: 121 QRDGDGQIVTSDGYLLEPAIVIPEDGTDITISSTGQVYVSQPGDDEAQEIGQIELVRFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +           +  +       T+++G LE SN   + EM  +I   + +
Sbjct: 181 PAGLRAIGRNLFRETAASGDPQIGNPGDDGFPTLQQGILERSNVQVVEEMVNLIVAQRAY 240

Query: 221 NSITTLIDENEKSMLEA 237
            + +  I   ++ +  A
Sbjct: 241 EANSKTIQTADRLLEVA 257


>gi|94500243|ref|ZP_01306776.1| flagellar basal-body rod protein FlgG [Oceanobacter sp. RED65]
 gi|94427542|gb|EAT12519.1| flagellar basal-body rod protein FlgG [Oceanobacter sp. RED65]
          Length = 261

 Score =  178 bits (450), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 46/260 (17%), Positives = 95/260 (36%), Gaps = 20/260 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M ++  +      A +  L+T+++N++N  T GF+  +  F +++  I+           
Sbjct: 1   MHSALWVSKTGLNAQDHGLTTISNNLANVSTTGFKKDRAVFEDLIYQIQRQPGALSSQDS 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           GS   T   LD A+ G  +F +  P   I  TRDG F
Sbjct: 61  RLPSGLQLGTGVKVAGTQKIHTTGSLEETSQPLDLAINGRGFFQIALPDGQIAYTRDGTF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
            +  +G++V++ G     ++                V          + I  + +     
Sbjct: 121 HMDAEGNIVNSQGYLLEPNITIPDQTNTMTISRDGIVSVTQFGDTTPQEIGQIDVVDFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +           E          ++++GFLE+SN   + EM +MI + + +
Sbjct: 181 PTGLQAVGGNLFLETAASGAPEIGVASEDGFGSIEQGFLENSNVKVVEEMVKMITVQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRN 240
              + ++   ++ +    +N
Sbjct: 241 EMNSKVVSSADQMLQYLAQN 260


>gi|224531677|ref|ZP_03672309.1| flagellar basal-body rod protein FlgG [Borrelia valaisiana VS116]
 gi|224511142|gb|EEF81548.1| flagellar basal-body rod protein FlgG [Borrelia valaisiana VS116]
          Length = 265

 Score =  178 bits (450), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 48/263 (18%), Positives = 95/263 (36%), Gaps = 23/263 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +     +   A +  + T+A+N+SN +T GF+ I+ +F +++   ++          
Sbjct: 1   MMRALWTAASGMTAQQYNVDTIANNLSNVNTTGFKKIRAEFEDLIYQTQDRAGTPATENT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                            +   E G   ST    D A+EGD ++ +  P G    TRDG F
Sbjct: 61  LRPLGNQVGHGTKIAATHRIFEQGKMQSTNLLTDVAIEGDGFYKILLPDGTYAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNV---GEKGEISQKGKVIATMGLYSV 163
           K+  +  LV++ G   + ++      I     I +      K + + +   +  + +   
Sbjct: 121 KIDSNRELVTSQGYKVLPNIFFPEEYIQNSITISDQGIVSVKIDNNNEPIELGQIEISRF 180

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
               G     ++                       +K+G LE SN +   EM  MI   +
Sbjct: 181 VNPAGLSAIGSNLFKETAGSGQEIAGIPGTEGMGRLKQGILEMSNVSIAEEMVTMIVAQR 240

Query: 219 KFNSITTLIDENEKSMLEAIRNI 241
            +   +  I  ++  +     N+
Sbjct: 241 AYEINSKAIQTSDNMLG-IANNL 262


>gi|92114096|ref|YP_574024.1| flagellar basal-body rod FlgG [Chromohalobacter salexigens DSM
           3043]
 gi|91797186|gb|ABE59325.1| Flagellar basal-body rod FlgG [Chromohalobacter salexigens DSM
           3043]
          Length = 260

 Score =  178 bits (450), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 89/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S         + + +L  +++N+SN  T GF+  +  F +++               
Sbjct: 1   MIRSLWTAKTGLESQQVKLDVISNNLSNVSTNGFKRSRPVFEDLLYQNVRQPGAQASAVD 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           G   +T    D A+ G  +FA++ P G    TRDG F
Sbjct: 61  TLPSGLQVGTGVRPVATERLHTQGGLQNTDNSKDLAINGQGFFAVQMPDGTSAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           ++ ++G +V+A G      +      +     +   V          + +  + L     
Sbjct: 121 QIDENGQMVTAGGYPLDPPIVIPENALSVSISQDGVVSVTQPGDTAAQEVGQLTLSKFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +         P             + +G++E SN N + EM  MI   + +
Sbjct: 181 PAGLQSMGENLYQETDASGPRNDLIPGMEGAGRLYQGYVETSNVNVVEEMVSMIETQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  ++ +++ +    +
Sbjct: 241 EINSKAVETSDQMLSRLTQ 259


>gi|114320059|ref|YP_741742.1| flagellar basal-body rod protein FlgG [Alkalilimnicola ehrlichii
           MLHE-1]
 gi|114226453|gb|ABI56252.1| flagellar basal-body rod protein FlgG [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 261

 Score =  178 bits (450), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 51/261 (19%), Positives = 91/261 (34%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +  +      A + R+  V++N++N +T GF+  +  F +++         +     
Sbjct: 1   MNPALWVAKTGLDAQQTRMQVVSNNLANVNTTGFKKDRANFEDLIYQTVRQAGGQSTQDT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    + V           G+   T   LD A+EGD +F +  P   I  +RDG F
Sbjct: 61  LLPTGLNLGTGVRVTSTEKIHMQGNIQQTENSLDIAIEGDGFFQILMPDGEIAYSRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
            V D G +V++SG      +      +         V  +       + +  + L     
Sbjct: 121 NVDDQGQMVTSSGYQLQPPINIPDDAVSVTIGRDGTVSARLPGQADPQQLGNIQLADFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +         P +          T+ +G LE SN N   E+  MI   + F
Sbjct: 181 PAGLDAMGGNLFRETAASGPPQISDPGLDGVGTLLQGALESSNVNIAEELVNMIETQRAF 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
            + T  I   ++ +     NI
Sbjct: 241 ETNTKAISSTDQMLQFINNNI 261


>gi|315636319|ref|ZP_07891569.1| flagellar basal-body rod protein FlgG [Arcobacter butzleri JV22]
 gi|315479408|gb|EFU70091.1| flagellar basal-body rod protein FlgG [Arcobacter butzleri JV22]
          Length = 262

 Score =  178 bits (450), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 43/263 (16%), Positives = 92/263 (34%), Gaps = 21/263 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M            A++ ++   ++N++N +T GF+  + +F +++    N          
Sbjct: 1   MIRGLYTAATGMNAMQHQIDVTSNNIANVNTTGFKKDRAEFQDLMYESLNYTAGRTTQTT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                      V           G   STG  LD A+ G  +F +  P      +R+G F
Sbjct: 61  LNPTGIDVGLGVRISNIQKEFTEGDLKSTGNPLDIAIAGKGFFQITLPSGETAYSRNGNF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFN-VGEKGEISQKGKVIATMGLYSVDM 165
           K+ ++G++V+ +G     ++                V  K   +     +  + L     
Sbjct: 121 KLNEEGTIVNGNGYPLQPEIVVPNNVKDISVGTDGLVTAKDPQTGDTIELGQITLADFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     +S    +    P+ +         ++K+  LE SN   + EM  +I   + +
Sbjct: 181 PAGLTPLGDSLFMQSEASGPVVEGDPTTEQFGSLKQSMLESSNVKLVNEMVDLITAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNIAS 243
            + +  I   +  +   +  + S
Sbjct: 241 EANSKAITTADNMLD-IVNRLKS 262


>gi|78043762|ref|YP_359848.1| flagellar basal-body rod protein FlgG [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|77995877|gb|ABB14776.1| flagellar basal-body rod protein FlgG [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 261

 Score =  178 bits (450), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 51/258 (19%), Positives = 102/258 (39%), Gaps = 19/258 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  S   G++   + + ++  VA+N+SN +T+G+++ +V F +++    N      S+V 
Sbjct: 1   MIRSLYSGISGLKSHQYKMDVVANNISNVNTIGYKSSRVNFEDLIYQKTNQSGVYPSYVG 60

Query: 61  SGKEY----LSKEVGSFISTGTELDFALEGDAWFALESP--RGIILTRDGRFKVTDDGSL 114
            G            G   STG  LD A++G+ +F L+ P       +R+G F +  DG L
Sbjct: 61  LGVNVSGVDTIFTQGGLKSTGRPLDVAIQGNGFFVLKDPVTTRTYYSREGVFYLDKDGYL 120

Query: 115 VSASGKYPV------LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
           ++  G          + + +    +    +     +        +    +GL S    + 
Sbjct: 121 INGHGYRVQDVNGADIQINNPEAVVTLTIQNDGQIKLVRSDGTTEFAGPIGLMSFKNPET 180

Query: 169 FVRRENSGISPNIP-------PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221
             R   +  S  I        P          +  G+LE SN +   E  +MI   + + 
Sbjct: 181 LERIGQNVYSATIDTQTSFSSPVTPGQQGQGILVSGYLEMSNVDLASEFTEMIVTQRGYQ 240

Query: 222 SITTLIDENEKSMLEAIR 239
           +   +I  +++ + E + 
Sbjct: 241 ANARVITTSDQMLEELLN 258


>gi|83647171|ref|YP_435606.1| flagellar basal body rod protein FlgG [Hahella chejuensis KCTC
           2396]
 gi|83635214|gb|ABC31181.1| Flagellar basal body rod protein [Hahella chejuensis KCTC 2396]
          Length = 261

 Score =  178 bits (450), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 47/261 (18%), Positives = 93/261 (35%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  +      A +  L T+++N++N +T GF+  +  F +++  IK           
Sbjct: 1   MHGALWVSKTGLAAQDTALKTISNNLANVNTTGFKRDRAVFQDLLYQIKRQPGGQSSQDT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+   T   LD A+ G  +F +  P   I  TRDG+F
Sbjct: 61  QLPSGLQLGTGVRVVGTQKVFSEGNLEVTEQPLDIAINGRGFFQILMPDGTISYTRDGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
            +  DG +V+A+G      +      +         V      +     +  +       
Sbjct: 121 HLNSDGDVVTANGFPLEPGITVPDGALHLTISTDGVVSVTVAGTATPTQVGNINTVDFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     N+           ++ +       TV++G +E SN   + EM  MI   + +
Sbjct: 181 PAGLEAIGNNLFRETAASGDPQEGTPGLAGLGTVEQGMVETSNVEIVEEMVNMITTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
                ++   ++ +    +N+
Sbjct: 241 EMNAKVVTTADQMLQYITQNL 261


>gi|188587423|ref|YP_001918968.1| flagellar basal-body rod protein FlgG [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|179352110|gb|ACB86380.1| flagellar basal-body rod protein FlgG [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 265

 Score =  177 bits (449), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 52/264 (19%), Positives = 96/264 (36%), Gaps = 24/264 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G +   A ++ +  V++N++N +T G++  + +F +++ A     D       
Sbjct: 1   MFRSLWTGASGMNAQQKNMDVVSNNLANANTTGYKNSRAEFQDLIYATLERPDGPDDLGD 60

Query: 54  ---------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRD 103
                    Q      +         GS   T  + D A+EGD +F +E +      TRD
Sbjct: 61  DGRSTPAGIQIGHGAKNSATLRDFSTGSMQETEQDFDLAIEGDGFFIIEGTEGEEYYTRD 120

Query: 104 GRFKVTDDGSLVSASGKYPV-LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162
           G FK+  +G+LV++ G +    D                         +   I  + + S
Sbjct: 121 GSFKIDGEGNLVTSDGLHVQSFDGEIPQEATNVSITEEGRVIATLEDGETDEIGEIEIAS 180

Query: 163 VDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLT 217
                G   + ++  S                    +++GFLE SN N   EM  MI   
Sbjct: 181 FINPAGLEAQGSNLYSATAASGDASVGLPGENGRGQLQQGFLEGSNVNIAEEMVNMITAQ 240

Query: 218 QKFNSITTLIDENEKSMLEAIRNI 241
           + + + +  I   ++ M     N+
Sbjct: 241 RAYETNSKSIQSTDEMM-SIANNL 263


>gi|197285508|ref|YP_002151380.1| flagellar basal-body rod protein [Proteus mirabilis HI4320]
 gi|227355999|ref|ZP_03840391.1| flagellar basal-body rod protein (distal rod protein) [Proteus
           mirabilis ATCC 29906]
 gi|194682995|emb|CAR43442.1| flagellar basal-body rod protein (distal rod protein) [Proteus
           mirabilis HI4320]
 gi|227163987|gb|EEI48889.1| flagellar basal-body rod protein (distal rod protein) [Proteus
           mirabilis ATCC 29906]
          Length = 260

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 92/259 (35%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A +  +  +++N++N  T GF+  +  F +++               
Sbjct: 1   MIRSLWIAKTGLDAQQTNMDVISNNLANVSTNGFKRQRAVFEDLLYQTIRQPGAMTSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           G+   T    D A++G  +F ++ P G    TRDG F
Sbjct: 61  NAPSGLQIGTGVRPVATERLHSQGNLAQTNGTRDVAIKGQGFFHVQLPDGTDAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           ++  +G LV++SG   V  +                V  + E S   + +  + L +   
Sbjct: 121 QMDQNGQLVTSSGFQIVPAIILPETAKKVMVGRDGIVSVEIEGSPAPQQVGQLTLTTFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +            + +        + +G++E SN N   E+  MI   + +
Sbjct: 181 DSGLESVGENLYLETASSGAPTENAPGINGAGLLYQGYVETSNVNVAEELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  I  +++ + +  +
Sbjct: 241 EINSKAISTSDQMLQKLTQ 259


>gi|256751339|ref|ZP_05492218.1| flagellar basal-body rod protein FlgG [Thermoanaerobacter
           ethanolicus CCSD1]
 gi|256749721|gb|EEU62746.1| flagellar basal-body rod protein FlgG [Thermoanaerobacter
           ethanolicus CCSD1]
          Length = 266

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 60/266 (22%), Positives = 110/266 (41%), Gaps = 25/266 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +     +   A +  +  +A+N++N +T  F+  + +F +++       +       
Sbjct: 1   MMRALWSAASGMTAQQLNVDVIANNLANVNTTAFKRDRAEFKDLIYQTLQRENVYGGQGK 60

Query: 54  ----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKV 108
               Q    V           GS   T   LD AL+G+ +FA+  P   +  TRDG FK+
Sbjct: 61  PVNMQVGVGVRLSAIVKDFTGGSLQQTDNPLDLALDGEGFFAVLGPDGKVYYTRDGSFKL 120

Query: 109 TDDGS--LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK-----VIATMGLY 161
           + +G+  ++  +  YPVLD +  PI     ++  +V   G IS K        +AT+G+Y
Sbjct: 121 SPNGNNLMLVTADGYPVLDDSGNPIVFDSTEKDISVSPMGVISVKNPDGTTQEVATLGIY 180

Query: 162 SVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
           +   +QG +   ++   P             +     V +GFLE SN   + EM  MI  
Sbjct: 181 NFVNTQGLLSVGSNLYEPTEASGQPGTRDDFEGRMGKVMQGFLETSNIQIVKEMVDMIAA 240

Query: 217 TQKFNSITTLIDENEKSMLEAIRNIA 242
            + +   +  I   ++ +     N+ 
Sbjct: 241 QRAYEINSKAIQAADEMLG-IANNLR 265


>gi|312148533|gb|ADQ31192.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi JD1]
          Length = 265

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 50/263 (19%), Positives = 92/263 (34%), Gaps = 23/263 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +     +   A +  + T+A+N+SN +T GF+ I+ +F +++    N          
Sbjct: 1   MMRALWTAASGMTAQQYNVDTIANNLSNVNTTGFKKIRAEFEDLIYQTHNRAGTPATENT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                                E G   ST    D A+EGD ++ +  P G    TRDG F
Sbjct: 61  LRPLGNQVGHGTKIAATQRIFEQGKMQSTNLLTDVAIEGDGFYKILLPDGTYAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF---NVGEKGEISQKGKVIATMGLYSV 163
           K+  +  LV+  G   + ++      I     I     V  K + S +   +  + +   
Sbjct: 121 KIDSNRELVTNQGYKVLPNILFPEEYIQNSITISEEGIVSVKIDTSNEPIELGQIEISRF 180

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
               G     ++                       +++G LE SN +   EM  MI   +
Sbjct: 181 INPAGLSAIGSNLFKETAGSGQEIAGIPGSEGMGRLRQGILEMSNVSIAEEMVTMIVAQR 240

Query: 219 KFNSITTLIDENEKSMLEAIRNI 241
            +   +  I  ++  +     N+
Sbjct: 241 AYEINSKAIQTSDNMLG-IANNL 262


>gi|15639944|ref|NP_219397.1| flagellar basal body rod protein FlgG [Treponema pallidum subsp.
           pallidum str. Nichols]
 gi|189026183|ref|YP_001933955.1| flagellar basal body rod protein FlgG [Treponema pallidum subsp.
           pallidum SS14]
 gi|3323281|gb|AAC65915.1| flagellar basal-body rod protein (flgG-1) [Treponema pallidum
           subsp. pallidum str. Nichols]
 gi|189018758|gb|ACD71376.1| flagellar basal-body rod protein [Treponema pallidum subsp.
           pallidum SS14]
 gi|291060315|gb|ADD73050.1| flagellar basal-body rod protein FlgG [Treponema pallidum subsp.
           pallidum str. Chicago]
          Length = 264

 Score =  177 bits (448), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 51/260 (19%), Positives = 90/260 (34%), Gaps = 22/260 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ------ 54
           M  S           +  + TVA+N++N +T GF+  + +F +++               
Sbjct: 1   MVRSLWTAATGMNGQQANIDTVANNLANVNTSGFKRQRAEFEDLLYQTIRTAGTPATEDT 60

Query: 55  -------KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                      V         E GS   TG   D A+ G+ +F +    G    TRDG F
Sbjct: 61  LTPVGVRMGHGVKLAATQRLFEQGSLQHTGVSGDVAIAGEGFFRVLQYDGTYAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI---SQKGKVIATMGLYSV 163
           KV  +  LV+++G   V ++      +     I   G              +  + LY  
Sbjct: 121 KVDAERQLVTSNGLRLVPEIIFPENYVEHSIAISKDGRVTVRVGEQGDPVEVGQLELYRF 180

Query: 164 DMSQGFVRRENS-GISPNIPPTPLE----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
             + G      +          P+           V+  FLE SN +++ EM  MI   +
Sbjct: 181 ANNAGLAAEGGNVFTQTPASGQPIPGRPGFEGFGKVEHKFLEMSNVSTVSEMVNMIVAQR 240

Query: 219 KFNSITTLIDENEKSMLEAI 238
            +   +  I  ++  +  A+
Sbjct: 241 AYEFNSKAIQTSDNMLGTAV 260


>gi|268317781|ref|YP_003291500.1| flagellar basal-body rod protein FlgG [Rhodothermus marinus DSM
           4252]
 gi|262335315|gb|ACY49112.1| flagellar basal-body rod protein FlgG [Rhodothermus marinus DSM
           4252]
          Length = 262

 Score =  177 bits (448), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 54/259 (20%), Positives = 99/259 (38%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +         A +  +  +A N++N +T GF+  +V F +++        Q+     
Sbjct: 1   MLRALRTAALGMNAQQTNVDNIAHNLANANTTGFKNARVVFQDLLYQTVQTPGQEEAEGL 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    S VA          GS + TG  LD A+ GD +F +  P   I+ TRDG F
Sbjct: 61  TPPASLQLGSGVAVVATVRQFTQGSLVETGNALDLAINGDGFFQIRRPDGTIVYTRDGTF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
            +  DG+ V+ +G     +++  P  I     +   V  + +   +   I  + L     
Sbjct: 121 TLNADGTFVTQTGLPLEPELSVPPDTIEIHISQDGVVSVRLQGETESVEIGRLELARFPN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +              +       TVK+GFLE +N + + EM  +I   + +
Sbjct: 181 PAGLRAIGGNLYEQTEASGFPILGAPGEEGFGTVKQGFLEAANVDVVQEMVNLITAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              + ++   E+ +  A +
Sbjct: 241 EINSKMVTTTEEMLQTASQ 259


>gi|167038784|ref|YP_001661769.1| hypothetical protein Teth514_0111 [Thermoanaerobacter sp. X514]
 gi|300913631|ref|ZP_07130948.1| fagellar hook-basal body protein [Thermoanaerobacter sp. X561]
 gi|307723354|ref|YP_003903105.1| fagellar hook-basal body protein [Thermoanaerobacter sp. X513]
 gi|166853024|gb|ABY91433.1| protein of unknown function DUF1078 domain protein
           [Thermoanaerobacter sp. X514]
 gi|300890316|gb|EFK85461.1| fagellar hook-basal body protein [Thermoanaerobacter sp. X561]
 gi|307580415|gb|ADN53814.1| fagellar hook-basal body protein [Thermoanaerobacter sp. X513]
          Length = 266

 Score =  177 bits (448), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 60/266 (22%), Positives = 110/266 (41%), Gaps = 25/266 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +     +   A +  +  +A+N++N +T  F+  + +F +++       +       
Sbjct: 1   MMRALWSAASGMTAQQLNVDVIANNLANVNTTAFKRDRAEFKDLIYQTLQRENVYGGQGK 60

Query: 54  ----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKV 108
               Q    V           GS   T   LD AL+G+ +FA+  P   +  TRDG FK+
Sbjct: 61  PVNMQVGVGVRPSAIVKDFTEGSLQQTENPLDLALDGEGFFAVLGPDGKVYYTRDGSFKL 120

Query: 109 TDDGS--LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK-----VIATMGLY 161
           + +G+  ++  +  YPVLD +  PI     ++  +V   G IS K        +AT+G+Y
Sbjct: 121 SPNGNNLMLVTADGYPVLDDSGNPIVFDSTEKDISVSPMGVISVKNPDGTTQEVATLGIY 180

Query: 162 SVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
           +   +QG +   ++   P             +     V +GFLE SN   + EM  MI  
Sbjct: 181 NFVNTQGLLSVGSNLYEPTEASGQPGTRDDFEGRMGKVMQGFLETSNIQIVKEMVDMIAA 240

Query: 217 TQKFNSITTLIDENEKSMLEAIRNIA 242
            + +   +  I   ++ +     N+ 
Sbjct: 241 QRAYEINSKAIQAADEMLG-IANNLR 265


>gi|90021853|ref|YP_527680.1| flagellar basal body rod protein FlgG [Saccharophagus degradans
           2-40]
 gi|89951453|gb|ABD81468.1| Flagellar basal-body rod FlgG [Saccharophagus degradans 2-40]
          Length = 261

 Score =  177 bits (448), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 51/261 (19%), Positives = 98/261 (37%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  +      A + RL+T+A+N++N  TVGF+  +  F +++  I+           
Sbjct: 1   MHAALYVSKTGLAAQDTRLTTIANNLANASTVGFKRDRAVFEDLLYQIQRQPGAQTTEET 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                 Q  + V           GS   TG  LD A++G  +  +  P G +  TRDG+F
Sbjct: 61  QLPSGLQLGTGVRVVGTQKQFTPGSLQVTGQSLDVAIDGRGFIPVLQPDGTVSYTRDGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI-ATMGLYSVDM 165
            +   G +V+ASG      +               V       +   V+   + +     
Sbjct: 121 HLDGQGQVVNASGLLIQPAITIPDNAETVTIGTDGVVSASVRGEPAPVVLGNLQIVDFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +              +       ++K+G LE+SN + + EM  MI   + +
Sbjct: 181 PAGLQAIGGNLFLETASSGNPIQGTPGENGLGSIKQGMLENSNVDIVEEMVNMITTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
              + ++  +++ +    +NI
Sbjct: 241 EMNSKVVSTSDQMLQFITQNI 261


>gi|225551864|ref|ZP_03772807.1| flagellar basal-body rod protein FlgG [Borrelia sp. SV1]
 gi|225371659|gb|EEH01086.1| flagellar basal-body rod protein FlgG [Borrelia sp. SV1]
          Length = 265

 Score =  177 bits (448), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 49/263 (18%), Positives = 93/263 (35%), Gaps = 23/263 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +     +   A +  + T+A+N+SN +T GF+ I+ +F +++    N          
Sbjct: 1   MMRALWTAASGMTAQQYNVDTIANNLSNVNTTGFKKIRAEFEDLIYQTHNRAGTPATENT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                                E G   ST    D A+EGD ++ +  P G    TRDG F
Sbjct: 61  LRPLGNQVGHGTKIAATQRIFEQGKMQSTNLLTDVAIEGDGFYKILLPDGTYAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF---NVGEKGEISQKGKVIATMGLYSV 163
           K+  +  LV++ G   + ++      I     I     V  K + + +   +  + +   
Sbjct: 121 KIDSNRELVTSQGYKVLPNIFFPEEYIQNSIAISEEGIVSVKIDNNNEPIELGQIEISRF 180

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
               G     ++                       +++G LE SN +   EM  MI   +
Sbjct: 181 VNPAGLSAIGSNLFKETAGSGQEIAGIPGSEGMGRLRQGILEMSNVSIAEEMVTMIVAQR 240

Query: 219 KFNSITTLIDENEKSMLEAIRNI 241
            +   +  I  ++  +     N+
Sbjct: 241 AYEINSKAIQTSDNMLG-IANNL 262


>gi|116331368|ref|YP_801086.1| flagellar basal body rod protein FlgG [Leptospira borgpetersenii
           serovar Hardjo-bovis JB197]
 gi|116125057|gb|ABJ76328.1| Endoflagellar distal basal body rod protein [Leptospira
           borgpetersenii serovar Hardjo-bovis JB197]
          Length = 264

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 54/261 (20%), Positives = 94/261 (36%), Gaps = 23/261 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55
             S        +A +  + T+++N++N +T GF+  +  F ++V   +            
Sbjct: 1   MRSLWTAATGMIAQQFHIDTISNNLANVNTTGFKKNRADFEDLVYQHQVLAGTPATSVSE 60

Query: 56  -------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRF 106
                     V +       E+GSF +TG +LD A+ G+  F            +RDG F
Sbjct: 61  IPTGVNVGHGVRAAASQKLFEIGSFQATGNKLDMAITGEMGFFKIQMPDGSFAFSRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI---SQKGKVIATMGLYSV 163
           K+  +  +V+++G      +      I     I   GE         +  VI  + LY  
Sbjct: 121 KIDSNQQVVTSNGYLLEPPLILPEGAILNTLMISEQGEVTVKVGADIRPIVIGQVELYRF 180

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
               G      +     +   P             V +GFLE SN   + EM  MI   +
Sbjct: 181 VNPAGLQAIGKNLFQETVASGPEIPGTPGMEGFGNVLQGFLEMSNVKIVEEMVAMIVAQR 240

Query: 219 KFNSITTLIDENEKSMLEAIR 239
            + S +  I  ++  +  AI 
Sbjct: 241 AYESNSKAIQTSDNMLSTAIS 261


>gi|217076897|ref|YP_002334613.1| flagellar basal-body rod protein FlgG [Thermosipho africanus
           TCF52B]
 gi|217036750|gb|ACJ75272.1| flagellar basal-body rod protein FlgG [Thermosipho africanus
           TCF52B]
          Length = 261

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 96/256 (37%), Gaps = 19/256 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M            A + +L T+++N++N DT G++ +K +F +++     +         
Sbjct: 1   MINGLYTAATGMWAQQFKLDTLSNNIANVDTAGYKKVKSEFQDLLYDYSKNAGAATAQNS 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRF 106
                                  G+   TG  LD A+ GD +F ++     I  TRDG+F
Sbjct: 61  LHPTGLYVGHGTKLSATTRIFTQGNLERTGNSLDLAISGDGFFQIQLQDGRIAYTRDGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           K+  +G +++++G     ++      +        +          + + T+ L      
Sbjct: 121 KIDGNGRIITSNGNLLSPNIVVPQNAVSLSISPDGIVTAELQDGTLQNLGTITLVRFINP 180

Query: 167 QGFVRRENSGI-SPNIPPTPLE----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221
            G     ++         TP+E         ++ +G++E SN + + EM  MI   + + 
Sbjct: 181 SGLKAIGDNLFLETPASGTPVEGTAGQDGFGSILQGYVEKSNVDIVKEMVDMISAMRAYE 240

Query: 222 SITTLIDENEKSMLEA 237
             +  I   ++ +  A
Sbjct: 241 LNSRTIQTADEMLRTA 256


>gi|224534580|ref|ZP_03675156.1| flagellar basal-body rod protein FlgG [Borrelia spielmanii A14S]
 gi|224514257|gb|EEF84575.1| flagellar basal-body rod protein FlgG [Borrelia spielmanii A14S]
          Length = 265

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 49/263 (18%), Positives = 93/263 (35%), Gaps = 23/263 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +     +   A +  + T+A+N+SN +T GF+ I+ +F +++   +N          
Sbjct: 1   MMRALWTAASGMTAQQYNVDTIANNLSNVNTTGFKKIRAEFEDLIYQTQNRAGTPATENT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                                E G   ST    D A+EGD ++ +  P G    TRDG F
Sbjct: 61  LRPLGNQVGHGTKIAATQRIFEQGKMQSTNLLTDIAIEGDGFYKILLPDGTYAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNV---GEKGEISQKGKVIATMGLYSV 163
           K+  +  LV++ G   + ++      I     I        K + S +   +  + +   
Sbjct: 121 KIDSNRELVTSQGYKVLPNIFFPEEYIQNSITISEQGIVSVKIDNSNEPIELGQIEISRF 180

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
               G     ++                       +++G LE SN +   EM  MI   +
Sbjct: 181 VNPAGLNAIGSNLFKETAGSGQEIAGIPGSEGMGRLRQGILEMSNVSIAEEMVTMIVAQR 240

Query: 219 KFNSITTLIDENEKSMLEAIRNI 241
            +   +  I  ++  +     N+
Sbjct: 241 AYEINSKAIQTSDNMLG-IANNL 262


>gi|297543693|ref|YP_003675995.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
 gi|296841468|gb|ADH59984.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
          Length = 251

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 55/253 (21%), Positives = 107/253 (42%), Gaps = 15/253 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG-----------AIK 49
           M        +  +   + +  + +N++N +T G++   V  S                  
Sbjct: 1   MLRGLYAASSGMVTQTKIMDVLTNNLANVNTTGYKRDIVITSSFPNFEVTRYGGDNVPPD 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109
             I +    +     + + E GSF  T  +LDFA++G+ +F +++P G   TRDG F ++
Sbjct: 61  GKIGKMDYGILIDTFHTNFEEGSFTQTNGKLDFAIDGNGFFVIDTPNGQRYTRDGSFVLS 120

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169
           +DG LV+  G             I       +V E G I   G+++  + +   D   G 
Sbjct: 121 NDGYLVTQEGYIVQ----GENGPIELSQGDISVDEMGNIKNNGQLVDRLRIVDFDNYDGL 176

Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
            +  N+    +         +   +K+GFLE SN NS+ EM  MI + + + S   ++  
Sbjct: 177 RKEGNNLFFIDNSANVQVIPATGRIKQGFLEQSNVNSVKEMVNMISVMRNYESNQKVVIA 236

Query: 230 NEKSMLEAIRNIA 242
            ++++ +A+  + 
Sbjct: 237 FDETLGKAVNEVG 249


>gi|296274032|ref|YP_003656663.1| flagellar basal-body rod protein FlgG [Arcobacter nitrofigilis DSM
           7299]
 gi|296098206|gb|ADG94156.1| flagellar basal-body rod protein FlgG [Arcobacter nitrofigilis DSM
           7299]
          Length = 263

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 50/263 (19%), Positives = 98/263 (37%), Gaps = 21/263 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M        +   A + ++   ++N+SN +T GF+  + +F +++    N          
Sbjct: 1   MIKGMYTAASGMYAQQHQIDVTSNNISNVNTAGFKKDRAEFEDLMYQRLNYTGGSTSQDT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    S V       S E G    TG +LD A+EG  +F +  P      TR+G+F
Sbjct: 61  RNPTGIDVGSGVRISGIQKSFEEGDLEPTGNDLDIAIEGKGFFRVTLPNGETAYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFN-VGEKGEISQKGKVIATMGLYSVDM 165
           KV  DGS+V+ +G     ++                +      +Q+ + +  + L     
Sbjct: 121 KVNSDGSIVNGNGYLLDPEIVIPDNLTKINISNDGLITATDPTTQEEQEVGQITLSDFVN 180

Query: 166 SQGFVRRENSGI-SPNIPPTPLEDLS----GVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      S   +      P++          +++GF+E SN   + EM  +I   + +
Sbjct: 181 PAGLAPMGESLFRATTASGDPIDANPTEEQFGNLRQGFVEMSNVKLVSEMVDLITAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNIAS 243
            + +  I   +K +      + +
Sbjct: 241 EANSKAIQTADKLL-TIANQLKT 262


>gi|121596119|ref|YP_988015.1| flagellar basal-body rod protein FlgG [Acidovorax sp. JS42]
 gi|222112274|ref|YP_002554538.1| flagellar basal-body rod protein flgg [Acidovorax ebreus TPSY]
 gi|120608199|gb|ABM43939.1| flagellar basal-body rod protein FlgG [Acidovorax sp. JS42]
 gi|221731718|gb|ACM34538.1| flagellar basal-body rod protein FlgG [Acidovorax ebreus TPSY]
          Length = 260

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 52/259 (20%), Positives = 98/259 (37%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S  I      A + +L  ++ N++N  T GF+     F +++      +  +     
Sbjct: 1   MMNSLWIAKTGMTAQQTQLDVISHNLANVSTTGFKRNNAVFEDLIYQNLRQVGSQTTEEN 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                      V       +   GS   +G  LD A++G+ +F ++ P G    TRDG F
Sbjct: 61  QLPTGLHLGLGVNVVATSRNFTQGSLQQSGNSLDVAIDGNGFFEVQLPDGTTGYTRDGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           K+   G +V++SG      +            E   V      +   + I  +G+ S   
Sbjct: 121 KLDSQGRVVTSSGLPVAPGITVPADAKSISISERGMVSVTVAGNPNPQQIGQLGMSSFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
           S G      +    +      +     T     +K+GFLE+SN N + E+  MI   + +
Sbjct: 181 SAGLEPVGQNLYRESAASGAPQQAEPGTNGLGIIKQGFLENSNVNVVEELVTMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  I  +++ + +  +
Sbjct: 241 EMNSKAIQTSDQMLAKLSQ 259


>gi|307718427|ref|YP_003873959.1| flagellar hook-basal body complex protein [Spirochaeta thermophila
           DSM 6192]
 gi|306532152|gb|ADN01686.1| flagellar hook-basal body complex protein [Spirochaeta thermophila
           DSM 6192]
          Length = 280

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 54/277 (19%), Positives = 105/277 (37%), Gaps = 36/277 (12%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51
           M   + IG +   +   R+  +A+N++N D  G++        F E++    ND      
Sbjct: 1   MIRGYYIGASGMASQLNRMDAIANNLANVDLTGYKRDTAIFKAFPELLIRRMNDRYFKIP 60

Query: 52  ---------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTR 102
                    + +  + V + + Y   E G    T     FALEG  +F + +P+G   TR
Sbjct: 61  WGSIDNTPVVGKLGTGVETNEVYTVFEQGPLKETKDPFHFALEGQGFFTVLTPQGERYTR 120

Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGE--------------- 147
           +G F +  +G LV+  G   V +   + I+        +                     
Sbjct: 121 NGSFILGPEGLLVTKEGYPVVGENGLIRIKANNFVVDEDGRIFQNARFAEDPDRLVALEE 180

Query: 148 -ISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE--DLSGVTVKRGFLEDSNA 204
               + +++  + + +V   +   ++ +S           E        V++GFLE SN 
Sbjct: 181 NEWDETELVDRLKIVNVRRPRYLQKQGDSLWRTTRESGEAEILQEGRPKVRQGFLEGSNV 240

Query: 205 NSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           N + EM QMI + + + +    I+  +  +   I  +
Sbjct: 241 NPVTEMVQMIEVNRAYEANQKTIETQDTLLGRLINEV 277


>gi|304317903|ref|YP_003853048.1| flagellar basal-body rod protein FlgG [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302779405|gb|ADL69964.1| flagellar basal-body rod protein FlgG [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 266

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 59/266 (22%), Positives = 102/266 (38%), Gaps = 25/266 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +     +   A +  +  +++N++N +T  F+  + +F +++       D       
Sbjct: 1   MIRALWSAASGMNAQQLNVDVISNNLANVNTTSFKRDRAEFQDLMYQTLQTEDVNAGQGK 60

Query: 54  ----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFK- 107
               Q    V           GS   T   LD AL+G+ +FA+  P      TRDG FK 
Sbjct: 61  PVNMQVGVGVRPSAIVKDFSEGSLQETDNPLDVALDGEGFFAVLGPDGNTYYTRDGSFKL 120

Query: 108 -VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG-----KVIATMGLY 161
            V  + + ++ +  YPVLD    PI      +  ++   G IS K      + IAT+G+Y
Sbjct: 121 SVDQNTATLTTADGYPVLDDGGNPITFDSTQKDISISPLGVISVKNPDGTQQDIATLGIY 180

Query: 162 SVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
           +     G + + N+                       V +GFLE SN   + EM  MI  
Sbjct: 181 NFQNPNGLLNKGNNLYEATAASGAPGTRDDFQGKMGNVVQGFLETSNVQVVNEMVNMIAA 240

Query: 217 TQKFNSITTLIDENEKSMLEAIRNIA 242
            + +   +  I   +  +     N+ 
Sbjct: 241 QRAYELNSKAIQAADDML-SIANNLR 265


>gi|229544402|ref|ZP_04433460.1| protein of unknown function DUF1078 domain protein [Bacillus
           coagulans 36D1]
 gi|229324887|gb|EEN90564.1| protein of unknown function DUF1078 domain protein [Bacillus
           coagulans 36D1]
          Length = 254

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 52/251 (20%), Positives = 92/251 (36%), Gaps = 12/251 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------KNDIDQ 54
           M  S   G++     +  L T+ +N++N +T G++  +V F + +              Q
Sbjct: 1   MLRSLYSGVSGMKNFQTELDTIGNNIANVNTYGYKKGRVTFKDAISQTLASATPGTSAQQ 60

Query: 55  KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSL 114
                  G        GS  STG  LDFA+ GD +F +        TR G F   D+  L
Sbjct: 61  VGLGSQIGSIDTVDTSGSPESTGRPLDFAITGDGYFRVADGNNTYYTRAGNFYFDDNRRL 120

Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174
           V++ G   +                    +     Q G  I T+ + +     G  +   
Sbjct: 121 VNSEGFTVLGTNGQAITLGANVKSFSVATDGTITDQDGNTIGTISIATFQNPAGLTKVGG 180

Query: 175 SGISPNIPP------TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228
           +  +           +        T+K G+LE SN +   E+  MI   + F + T +I 
Sbjct: 181 NLYTTTNSNAGTVTVSQPGQNGAGTIKSGYLEMSNVDLSEELTNMIVAERGFQANTRIIT 240

Query: 229 ENEKSMLEAIR 239
            +++ + E + 
Sbjct: 241 TSDEILQELVN 251


>gi|300311354|ref|YP_003775446.1| flagellar basal-body rod protein FlgG [Herbaspirillum seropedicae
           SmR1]
 gi|300074139|gb|ADJ63538.1| flagellar basal-body rod FlgG protein [Herbaspirillum seropedicae
           SmR1]
          Length = 260

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 91/259 (35%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A + +L  +++N++N  T GF+  +  F +++               
Sbjct: 1   MIRSLWISKTGLDAQQTQLDVISNNLANVSTNGFKRSRAVFEDLLYQTVRQPGAQSSQQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+   T  + D A++G+ +F +  P      TRDG F
Sbjct: 61  QLPSGLQIGTGVRPVATERIFTQGNVNQTNNDKDLAIQGNGFFQILLPDGTTAYTRDGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQKGKVIATMGLYSVDM 165
           +    G LV++SG      +               V    +  S     I T+ + +   
Sbjct: 121 QTDSQGQLVTSSGYTLQPPITVPLNTTKLTVGRDGVVSIMQAGSTATTQIGTIQVATFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   R  +              +  T     + +G++E SN N + E+  MI   + +
Sbjct: 181 PAGLESRGENLYMETAASGAPNPNNPGTNGAGALWQGYVETSNVNVVEELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  I  +++ + +  +
Sbjct: 241 EINSKAITTSDQMLAKLSQ 259


>gi|325982369|ref|YP_004294771.1| flagellar basal-body rod protein FlgG [Nitrosomonas sp. AL212]
 gi|325531888|gb|ADZ26609.1| flagellar basal-body rod protein FlgG [Nitrosomonas sp. AL212]
          Length = 260

 Score =  176 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 47/259 (18%), Positives = 90/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A + +L  +A+N++N +T GF+  +  F +++               
Sbjct: 1   MIRSLWISKTGLEAQQTKLDVIANNLANVNTNGFKRSRAVFEDLMYQTLRQPGAQSSQQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G    T    D A+ G  +F +  P      TRDG F
Sbjct: 61  QLPSGLQLGTGVKPVATESIFTQGIIQPTDNPRDVAIRGLGFFQVLMPDGTTAYTRDGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           ++  +G LV++SG      +   P            V      S     +  + L S   
Sbjct: 121 QLDLNGQLVTSSGYMVQPAIVVPPNTQTVTVGRDGTVSATVPGSNVPIQLGNIQLASFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G  +   +              +  T     + +GF+E SN + + E+  MI   + +
Sbjct: 181 PSGLQKMGENLYMETASSGTPNQNAPGTNGLGILDQGFVETSNVSVVEELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  I+ +++ + +  +
Sbjct: 241 EMNSKSIETSDQMLQKLAQ 259


>gi|30248324|ref|NP_840394.1| flagellar basal body rod protein FlgG [Nitrosomonas europaea ATCC
           19718]
 gi|30138210|emb|CAD84218.1| Flagella basal body rod protein [Nitrosomonas europaea ATCC 19718]
          Length = 260

 Score =  176 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 50/259 (19%), Positives = 94/259 (36%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A + ++  +A+N++N  T GF+ ++  F +++               
Sbjct: 1   MVRSLWISKTGLDAQQTKMDVIANNLANISTNGFKRMRPVFEDLLYQTIRQPGAQSSERT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           G+   TG   D A++G+ +F +  P G    TRDG F
Sbjct: 61  RLPSGLQLGTGVRPVATENIFLQGNLQQTGNTRDVAIQGEGFFQILLPDGTLAYTRDGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +   DG +V+ASG      +   P  +         V      S     +  + L +   
Sbjct: 121 QSDQDGQMVTASGFPLQPSITIPPNTLNITIGRDGTVSVLTPGSALPVPVGNIQLTTFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G  R   +     +           T     + +GF+E SN N + E+ +MI   + +
Sbjct: 181 PAGLQRFGENLYLETMSSGVPNPGIPGTNGIGLLNQGFVETSNVNVVEELVEMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  I  +++ +    +
Sbjct: 241 EINSRSISTSDQMLARLTQ 259


>gi|32266580|ref|NP_860612.1| flagellar basal body rod protein FlgG [Helicobacter hepaticus ATCC
           51449]
 gi|32262631|gb|AAP77678.1| flagellar distal rod protein FlgG [Helicobacter hepaticus ATCC
           51449]
          Length = 262

 Score =  176 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 47/257 (18%), Positives = 96/257 (37%), Gaps = 22/257 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S        L  + ++   ++N++N +T G++  + +F+++   +            
Sbjct: 1   MMRSLYTASTGMLGQQLQIDNTSNNIANVNTTGYKKQRAEFADLFYQVLQYAGTSTSETT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                      V           G    T   LD A+ G+ +F +E P   I  TR G F
Sbjct: 61  ISPTGIEVGIGVRPVAIQKMFSQGHPKETENNLDIAITGNGFFQIELPDGNIAYTRAGSF 120

Query: 107 KVTDDGSLVSASGKY--PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
           K+ +DG++V+A G    P L +     QI    +      +G  ++   ++  + + +  
Sbjct: 121 KLDNDGNVVNAEGYRLIPELTIPEGATQINIGTDGTVSVIEGNQTEVN-ILGQIEIVNFI 179

Query: 165 MSQGFVRRENSGIS-PNIPPTPLED----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G     ++     N    P+           +++GFLE SN   + EM  +I   + 
Sbjct: 180 NPAGLHSLGDNLFINTNASGDPVAGVPGLDGFGQLRQGFLELSNVKLVEEMTDLITGQRA 239

Query: 220 FNSITTLIDENEKSMLE 236
           + + +  I   +  +  
Sbjct: 240 YEANSKTIQTADSMLQT 256


>gi|289577406|ref|YP_003476033.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter italicus
           Ab9]
 gi|289527119|gb|ADD01471.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter italicus
           Ab9]
          Length = 251

 Score =  176 bits (445), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 54/253 (21%), Positives = 106/253 (41%), Gaps = 15/253 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG-----------AIK 49
           M        +  +   + +  + +N++N +T G++   V  S                  
Sbjct: 1   MLRGLYAASSGMVTQIKIMDVLTNNLANVNTTGYKRDIVITSSFPNFEVTRYGGDNIPPD 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109
             I +    +     + + E GS   T  +LDFA++G+ +F +++P G   TRDG F ++
Sbjct: 61  GKIGKMDYGILIDTFHTNFEEGSLTQTNGKLDFAIDGNGFFVIDTPNGQRYTRDGSFVLS 120

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169
           +DG LV+  G             I       +V E G I   G+++  + +   D   G 
Sbjct: 121 NDGYLVTQEGYIVQ----GENGPIELLQGDISVDEMGNIINNGQLVDRLRIVDFDNYDGL 176

Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
            +  N+    +         +   +K+GFLE SN NS+ EM  MI + + + S   ++  
Sbjct: 177 RKEGNNLFFIDNSANVQVIPATGRIKQGFLEQSNVNSVKEMVNMISVMRNYESNQKVVIA 236

Query: 230 NEKSMLEAIRNIA 242
            ++++ +A+  + 
Sbjct: 237 FDETLGKAVNEVG 249


>gi|74317650|ref|YP_315390.1| flagellar basal body rod protein FlgG [Thiobacillus denitrificans
           ATCC 25259]
 gi|74057145|gb|AAZ97585.1| flagellar basal body rod protein FlgG [Thiobacillus denitrificans
           ATCC 25259]
          Length = 260

 Score =  176 bits (445), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 47/259 (18%), Positives = 89/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A + ++  +++N++N  T GF+  +  F +++               
Sbjct: 1   MIRSLWIAKTGLDAQQTQMDVISNNLANVSTSGFKRARAVFEDLLYQTIRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                 Q  + V           G+   TG   D A++G+ +F +  P G    TRDG F
Sbjct: 61  QLPSGLQIGTGVKPVATERIFTQGNLQQTGNAKDVAIQGNGFFQVLMPDGTTSYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
               +G LV+ASG      +                V      S     I T+ L     
Sbjct: 121 MADANGQLVTASGYAVQPAITIPADTQTLTIGRDGTVSVTQPGSATPVTIGTLQLAMFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +  +           +  +     + +G++E SN N + E+  MI   + +
Sbjct: 181 PAGLQSLGENLYAETAASGTPSSSAPGSNGAGLLNQGYVETSNVNVVEELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  I  +++ +    +
Sbjct: 241 EINSKAIQTSDQMLQRLTQ 259


>gi|17989431|ref|NP_542064.1| flagellar basal body rod protein FlgG [Brucella melitensis bv. 1
           str. 16M]
 gi|23499916|ref|NP_699356.1| flagellar basal body rod protein FlgG [Brucella suis 1330]
 gi|62317103|ref|YP_222956.1| flagellar basal body rod protein FlgG [Brucella abortus bv. 1 str.
           9-941]
 gi|83269095|ref|YP_418386.1| flagellar basal body rod protein FlgG [Brucella melitensis biovar
           Abortus 2308]
 gi|148557926|ref|YP_001257213.1| flagellar basal body rod protein FlgG [Brucella ovis ATCC 25840]
 gi|161620236|ref|YP_001594122.1| flagellar basal body rod protein FlgG [Brucella canis ATCC 23365]
 gi|163844346|ref|YP_001622001.1| flagellar basal body rod protein FlgG [Brucella suis ATCC 23445]
 gi|189022368|ref|YP_001932109.1| flagellar basal body rod protein FlgG [Brucella abortus S19]
 gi|225628625|ref|ZP_03786659.1| flagellar basal-body rod protein FlgG [Brucella ceti str. Cudo]
 gi|237816665|ref|ZP_04595657.1| flagellar basal-body rod protein FlgG [Brucella abortus str. 2308
           A]
 gi|254691412|ref|ZP_05154666.1| flagellar basal body rod protein FlgG [Brucella abortus bv. 6 str.
           870]
 gi|254695290|ref|ZP_05157118.1| flagellar basal body rod protein FlgG [Brucella abortus bv. 3 str.
           Tulya]
 gi|254702576|ref|ZP_05164404.1| flagellar basal body rod protein FlgG [Brucella suis bv. 3 str.
           686]
 gi|254706292|ref|ZP_05168120.1| flagellar basal body rod protein FlgG [Brucella pinnipedialis
           M163/99/10]
 gi|254711414|ref|ZP_05173225.1| flagellar basal body rod protein FlgG [Brucella pinnipedialis
           B2/94]
 gi|254720610|ref|ZP_05182421.1| flagellar basal body rod protein FlgG [Brucella sp. 83/13]
 gi|254731833|ref|ZP_05190411.1| flagellar basal body rod protein FlgG [Brucella abortus bv. 4 str.
           292]
 gi|256029956|ref|ZP_05443570.1| flagellar basal body rod protein FlgG [Brucella pinnipedialis
           M292/94/1]
 gi|256043073|ref|ZP_05446017.1| flagellar basal body rod protein FlgG [Brucella melitensis bv. 1
           str. Rev.1]
 gi|256059608|ref|ZP_05449806.1| flagellar basal body rod protein FlgG [Brucella neotomae 5K33]
 gi|256111943|ref|ZP_05452894.1| flagellar basal body rod protein FlgG [Brucella melitensis bv. 3
           str. Ether]
 gi|256158118|ref|ZP_05456036.1| flagellar basal body rod protein FlgG [Brucella ceti M490/95/1]
 gi|256252928|ref|ZP_05458464.1| flagellar basal body rod protein FlgG [Brucella ceti B1/94]
 gi|256256598|ref|ZP_05462134.1| flagellar basal body rod protein FlgG [Brucella abortus bv. 9 str.
           C68]
 gi|260544341|ref|ZP_05820162.1| flagellar basal body rod protein [Brucella abortus NCTC 8038]
 gi|260564303|ref|ZP_05834788.1| flagellar basal body rod protein [Brucella melitensis bv. 1 str.
           16M]
 gi|260568516|ref|ZP_05838985.1| flagellar basal body rod protein [Brucella suis bv. 4 str. 40]
 gi|260757026|ref|ZP_05869374.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 6 str.
           870]
 gi|260759602|ref|ZP_05871950.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 4 str.
           292]
 gi|260882836|ref|ZP_05894450.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 9 str.
           C68]
 gi|261215659|ref|ZP_05929940.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 3 str.
           Tulya]
 gi|261220019|ref|ZP_05934300.1| flagellar basal-body rod protein FlgG [Brucella ceti B1/94]
 gi|261313736|ref|ZP_05952933.1| flagellar basal-body rod protein FlgG [Brucella pinnipedialis
           M163/99/10]
 gi|261319022|ref|ZP_05958219.1| flagellar basal-body rod protein FlgG [Brucella pinnipedialis
           B2/94]
 gi|261323577|ref|ZP_05962774.1| flagellar basal-body rod protein FlgG [Brucella neotomae 5K33]
 gi|261753156|ref|ZP_05996865.1| flagellar basal-body rod protein FlgG [Brucella suis bv. 3 str.
           686]
 gi|265985650|ref|ZP_06098385.1| flagellar basal-body rod protein FlgG [Brucella sp. 83/13]
 gi|265986975|ref|ZP_06099532.1| flagellar basal-body rod protein FlgG [Brucella pinnipedialis
           M292/94/1]
 gi|265989511|ref|ZP_06102068.1| flagellar basal-body rod protein FlgG [Brucella melitensis bv. 1
           str. Rev.1]
 gi|265993390|ref|ZP_06105947.1| flagellar basal-body rod protein FlgG [Brucella melitensis bv. 3
           str. Ether]
 gi|265996635|ref|ZP_06109192.1| flagellar basal-body rod protein FlgG [Brucella ceti M490/95/1]
 gi|297249954|ref|ZP_06933655.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 5 str.
           B3196]
 gi|306838572|ref|ZP_07471409.1| flagellar basal-body rod protein FlgG [Brucella sp. NF 2653]
 gi|306841049|ref|ZP_07473773.1| flagellar basal-body rod protein FlgG [Brucella sp. BO2]
 gi|17985308|gb|AAL54328.1| flagellar basal-body rod protein flgg [Brucella melitensis bv. 1
           str. 16M]
 gi|23463493|gb|AAN33361.1| flagellar basal-body rod protein FlgG [Brucella suis 1330]
 gi|62197296|gb|AAX75595.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 1 str.
           9-941]
 gi|82939369|emb|CAJ12317.1| Flagellar basal body rod protein [Brucella melitensis biovar
           Abortus 2308]
 gi|148369211|gb|ABQ62083.1| flagellar basal-body rod protein FlgG [Brucella ovis ATCC 25840]
 gi|161337047|gb|ABX63351.1| flagellar basal-body rod protein FlgG [Brucella canis ATCC 23365]
 gi|163675069|gb|ABY39179.1| flagellar basal-body rod protein FlgG [Brucella suis ATCC 23445]
 gi|189020942|gb|ACD73663.1| Flagellar basal body rod protein [Brucella abortus S19]
 gi|225616471|gb|EEH13519.1| flagellar basal-body rod protein FlgG [Brucella ceti str. Cudo]
 gi|237787478|gb|EEP61694.1| flagellar basal-body rod protein FlgG [Brucella abortus str. 2308
           A]
 gi|260097612|gb|EEW81486.1| flagellar basal body rod protein [Brucella abortus NCTC 8038]
 gi|260151946|gb|EEW87039.1| flagellar basal body rod protein [Brucella melitensis bv. 1 str.
           16M]
 gi|260155181|gb|EEW90262.1| flagellar basal body rod protein [Brucella suis bv. 4 str. 40]
 gi|260669920|gb|EEX56860.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 4 str.
           292]
 gi|260677134|gb|EEX63955.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 6 str.
           870]
 gi|260872364|gb|EEX79433.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 9 str.
           C68]
 gi|260917266|gb|EEX84127.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 3 str.
           Tulya]
 gi|260918603|gb|EEX85256.1| flagellar basal-body rod protein FlgG [Brucella ceti B1/94]
 gi|261298245|gb|EEY01742.1| flagellar basal-body rod protein FlgG [Brucella pinnipedialis
           B2/94]
 gi|261299557|gb|EEY03054.1| flagellar basal-body rod protein FlgG [Brucella neotomae 5K33]
 gi|261302762|gb|EEY06259.1| flagellar basal-body rod protein FlgG [Brucella pinnipedialis
           M163/99/10]
 gi|261742909|gb|EEY30835.1| flagellar basal-body rod protein FlgG [Brucella suis bv. 3 str.
           686]
 gi|262550932|gb|EEZ07093.1| flagellar basal-body rod protein FlgG [Brucella ceti M490/95/1]
 gi|262764260|gb|EEZ10292.1| flagellar basal-body rod protein FlgG [Brucella melitensis bv. 3
           str. Ether]
 gi|263000180|gb|EEZ12870.1| flagellar basal-body rod protein FlgG [Brucella melitensis bv. 1
           str. Rev.1]
 gi|264659172|gb|EEZ29433.1| flagellar basal-body rod protein FlgG [Brucella pinnipedialis
           M292/94/1]
 gi|264664242|gb|EEZ34503.1| flagellar basal-body rod protein FlgG [Brucella sp. 83/13]
 gi|297173823|gb|EFH33187.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 5 str.
           B3196]
 gi|306288938|gb|EFM60238.1| flagellar basal-body rod protein FlgG [Brucella sp. BO2]
 gi|306406358|gb|EFM62600.1| flagellar basal-body rod protein FlgG [Brucella sp. NF 2653]
          Length = 262

 Score =  176 bits (445), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 48/262 (18%), Positives = 90/262 (34%), Gaps = 21/262 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55
             +  I      A +  L  +A+N++N +T GF+  + +F++++   +            
Sbjct: 1   MKALTIAATGMNAQQLNLEVIANNIANINTTGFKRARAEFTDLLYQSERTAGVPNQANQA 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                      V +         GSF  TG   D AL G  WF ++SP    + TR G F
Sbjct: 61  IVPEGALVGLGVQTAAVRNLHIQGSFNQTGNPYDVALTGRGWFQIQSPTGETLYTRAGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE-KGEISQKGKVIATMGLYSVDM 165
               DG LV+  G      +   P  I            K +       +  + L +   
Sbjct: 121 NKNADGQLVTLDGNPVEPAITIPPDAIEVTITDTGQVFAKLQDQINQVDLGQLTLANFTN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +                      ++K+G+LE SN + + E+  +I   + +
Sbjct: 181 EAGLEPLGGNLYRETEASGGPLVGVPGDPGYGSIKQGYLEASNVDPVKEITDLITAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNIA 242
              + +I   ++      +N+ 
Sbjct: 241 EMNSKVIQAADEMAATVSKNLR 262


>gi|284007173|emb|CBA72457.1| flagellar basal-body rod protein FlgG [Arsenophonus nasoniae]
          Length = 260

 Score =  176 bits (445), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 93/259 (35%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A +  +  +++N++N  T GF+  +  F +++               
Sbjct: 1   MIRSLWIAKTGLDAQQTNMDVISNNLANVSTNGFKRGRAVFQDLMYQTLRQPGSLTSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           G+   T    D A++G  +F ++ P G    TRDG F
Sbjct: 61  LSPSGLQLGTGVRPIATQRLHSQGNLSQTNGSTDVAIKGQGFFHIQLPDGTDAYTRDGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V  +   V+A G   V  +      +         V      + + + +  + L +   
Sbjct: 121 QVDQNNQRVTAGGFAVVPPIVLPETALKVTISHDGIVSVVIPGNSEPQQVGQLALTTFVN 180

Query: 166 SQGFVRRENSGI-SPNIPPTPLEDLSGVT----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +     N    P+E   GV     + +G++E SN N   E+  MI   + +
Sbjct: 181 ETGLESIGENLYLETNSSGVPVETAPGVNGAGLLYQGYVETSNVNVAEELVSMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ +   ++
Sbjct: 241 EINSKAVSTSDQMLQRLMQ 259


>gi|182412221|ref|YP_001817287.1| flagellar basal-body rod protein FlgG [Opitutus terrae PB90-1]
 gi|177839435|gb|ACB73687.1| flagellar basal-body rod protein FlgG [Opitutus terrae PB90-1]
          Length = 261

 Score =  176 bits (445), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 51/259 (19%), Positives = 95/259 (36%), Gaps = 21/259 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S         A +  L+T+A+N++N +T GF+  K++F +++               
Sbjct: 1   MNLSLYSAATGMEAQQLNLNTIANNLANVNTPGFKRSKIEFQDLLYQKPTRASGTDSGGG 60

Query: 54  -------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGR 105
                  +  +             G   STG +LD A++GD +F ++ P G    TRDG 
Sbjct: 61  NIVPTGLEVGNGSRVAATSKVFTQGQLTSTGEKLDLAIQGDGFFEIQRPDGTFAYTRDGS 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           FK+   G +V+  G  PVL          +   I + G+       G     + +     
Sbjct: 121 FKLNAQGQVVTIDG-LPVLSGFQAIPAGTEGVAISDNGQVTLTGANGTTTFRLSVTRFAN 179

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +           E           + +G++E SN N + EM  +I   + +
Sbjct: 180 PSGLRSVGGNLYEETAASGTPEIGQPGEQGYGQIMQGYIESSNVNIVEEMVNLIVAQRAY 239

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  I  +++ +    +
Sbjct: 240 EINSKSIQTSDEMLQNVAQ 258


>gi|295097201|emb|CBK86291.1| flagellar basal-body rod protein FlgG, Gram-negative bacteria
           [Enterobacter cloacae subsp. cloacae NCTC 9394]
          Length = 260

 Score =  176 bits (445), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 93/259 (35%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A +  +  +++N++N +T GF+  +  F +++               
Sbjct: 1   MIRSLWIAKTGLEAQQTNMDVISNNLANVNTNGFKRQRAVFQDLLYQTMRQPGAQASEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G    TG + D A+EG  +F ++ P      TRDG F
Sbjct: 61  TLPSGLQLGTGVRPVSTQRVHTQGGLNMTGNDTDVAIEGKGFFQVQLPDGSTAYTRDGHF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
              ++G LV+A G   +  +      +  Q      V        + + +  + L +   
Sbjct: 121 DKNENGQLVNAEGHPILPGVVVPQDAKEMQISPDGIVSVTLPGQAQPQQVGQLTLATFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +            +L+       T+K+ ++E SN N   E+  MI + + +
Sbjct: 181 DAGLESIGGNLYRETQSSGAPNELNPGLEDAGTLKQKYIETSNVNVAEELVNMIQVQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ +    +
Sbjct: 241 EINSKAVSASDQMLQRLTQ 259


>gi|150020364|ref|YP_001305718.1| flagellar basal-body rod protein FlgG [Thermosipho melanesiensis
           BI429]
 gi|149792885|gb|ABR30333.1| flagellar basal-body rod protein FlgG [Thermosipho melanesiensis
           BI429]
          Length = 261

 Score =  176 bits (445), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 43/258 (16%), Positives = 95/258 (36%), Gaps = 19/258 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M            A + +L T+++N++N DT G++ +K +F +++     +         
Sbjct: 1   MINGLYTAATGMWAQQFKLDTLSNNIANVDTAGYKKVKTEFQDLLYDYSKNAGAATAQNS 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRF 106
                                  G+   TG  LD A+ GD +F ++     I  TRDG+F
Sbjct: 61  IHPTGLYVGHGTKLSATTRIFTQGNLERTGNSLDIAISGDGFFQIQLQDGRIAYTRDGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           K+  +G +++++G     ++      +        +          + + T+ L      
Sbjct: 121 KIDGNGRIITSNGNLLSPNIVVPQNAVAINISPDGIVTAELQDGTLQNLGTITLVRFINP 180

Query: 167 QGFVRRENSGI-SPNIPPTPLE----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221
            G     ++          P+E         ++ +G++E SN + + EM  MI   + + 
Sbjct: 181 SGLKAIGDNLYLETPASGAPVEGTAGQDGFGSILQGYVEKSNVDIVKEMVDMISAMRAYE 240

Query: 222 SITTLIDENEKSMLEAIR 239
             +  +   ++ +  A  
Sbjct: 241 LNSRTVQTADEMLRTASN 258


>gi|219685570|ref|ZP_03540386.1| flagellar basal-body rod protein FlgG [Borrelia garinii Far04]
 gi|219672848|gb|EED29871.1| flagellar basal-body rod protein FlgG [Borrelia garinii Far04]
          Length = 265

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 49/263 (18%), Positives = 93/263 (35%), Gaps = 23/263 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +     +   A +  + T+A+N+SN +T GF+ I+ +F +++   +N          
Sbjct: 1   MMRALWTAASGMTAQQYNVDTIANNLSNVNTTGFKKIRAEFEDLIYQTQNRAGTPATENT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                                E G   ST    D A+EGD ++ +  P G    TRDG F
Sbjct: 61  LRPLGNQVGHGTKIAATQRIFEQGKMQSTNLLTDVAIEGDGFYKILLPNGTYAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNV---GEKGEISQKGKVIATMGLYSV 163
           K+  +  LV++ G   + ++      I     I        K + S +   +  + +   
Sbjct: 121 KIDSNRELVTSQGYKVLPNIFFPEEYIQNSITISEQGIVSVKIDNSNEPIELGQIEISRF 180

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
               G     ++                       +++G LE SN +   EM  MI   +
Sbjct: 181 VNPAGLSAIGSNLFKETAGSGQEITGIPGSEGMGILRQGILEMSNVSIAEEMVTMIVAQR 240

Query: 219 KFNSITTLIDENEKSMLEAIRNI 241
            +   +  I  ++  +     N+
Sbjct: 241 AYEINSKAIQTSDNMLG-IANNL 262


>gi|260466625|ref|ZP_05812813.1| flagellar basal-body rod protein FlgF [Mesorhizobium opportunistum
           WSM2075]
 gi|259029631|gb|EEW30919.1| flagellar basal-body rod protein FlgF [Mesorhizobium opportunistum
           WSM2075]
          Length = 240

 Score =  175 bits (444), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 100/243 (41%), Positives = 151/243 (62%), Gaps = 4/243 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M+ S  + L+AQ+ALE+RL T+ADN++N +TVGFR   VKF +VV        + +SF +
Sbjct: 1   MRDSLYVALSAQMALERRLDTIADNVANANTVGFRATGVKFEDVVS---GTGQKSVSFAS 57

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           SGK YLS   G    TG   DFA++GDAWFA+++P G ++TRDGRF + ++G L+S  G 
Sbjct: 58  SGKTYLSGAHGPLNETGNPFDFAIQGDAWFAIDTPAGPVMTRDGRFSMNENGELMSIEG- 116

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
           +PVLD    PIQ+  ++     G  G + Q  +++ ++GLY+ D    FVR  NSGI P 
Sbjct: 117 HPVLDAGGAPIQLDPRNGPPKAGADGSLRQNDQLVGSIGLYNFDPGVNFVRYGNSGIVPA 176

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
             P P+ D S V + +GF+E+SN N + EM ++I + + F +   L+ + + S  EAI+ 
Sbjct: 177 RTPEPVTDRSDVGIAQGFVEESNVNPVLEMTRLIMVQRAFENTAALMRQTDSSTDEAIKT 236

Query: 241 IAS 243
           + S
Sbjct: 237 LGS 239


>gi|332800000|ref|YP_004461499.1| flagellar basal-body rod protein FlgG [Tepidanaerobacter sp. Re1]
 gi|332697735|gb|AEE92192.1| flagellar basal-body rod protein FlgG [Tepidanaerobacter sp. Re1]
          Length = 270

 Score =  175 bits (444), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 54/270 (20%), Positives = 102/270 (37%), Gaps = 29/270 (10%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +     +   A +  +   ++N++N +T GF+  + +F +++       D       
Sbjct: 1   MMRALWSASSGMQAQQLNMDITSNNLANVNTAGFKKSRAEFKDLLYETLQRPDSPELLSG 60

Query: 54  -------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGR 105
                  Q    V           G+   TG   D A+EG  +F +E P   +  TRDG 
Sbjct: 61  AAVPVGIQVGHGVRPSATGRDFNEGNLQPTGNTFDVAIEGTGFFMVERPDGNLAFTRDGS 120

Query: 106 FKVTDDG---SLVSASGKYPVLDMAS----VPIQIPQKDEIFNVGEKGEISQKGKVIATM 158
           FKV+ DG   +LV++ G Y +    S                 +    +     + +  +
Sbjct: 121 FKVSLDGTDRNLVTSEGYYVLSGDESYITIPEEYTDISISSDGLITGQDEDGTIEELGQI 180

Query: 159 GLYSVDMSQGFVRRENSGISPN------IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQ 212
           G+      QG +   N+           +P   + D    T+ +GFLE SN   + EM  
Sbjct: 181 GIVKFLNPQGLLAIGNNLFEATEASGEYVPMEDVSDPGYGTLLQGFLEMSNVQVVEEMVN 240

Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           +I   + +   T  +  +++ + +A  N+ 
Sbjct: 241 LIIAQRAYEVNTKAVQASDEMLAQA-NNLR 269


>gi|260893868|ref|YP_003239965.1| fagellar hook-basal body protein [Ammonifex degensii KC4]
 gi|260866009|gb|ACX53115.1| fagellar hook-basal body protein [Ammonifex degensii KC4]
          Length = 266

 Score =  175 bits (444), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 50/263 (19%), Positives = 96/263 (36%), Gaps = 26/263 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----DIDQKI 56
           M  S   G++     + R+  +A+N++N +T GF+  +  F +++         +  Q  
Sbjct: 1   MLRSLFSGVSGLRVHQIRMDVIANNIANINTTGFKAARANFQDILSQTLGRSAVNTTQVG 60

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-------PRGIILTRDGRFKVT 109
             V+          G+  +TG  LD A+EG+ +F ++            + TRDG F + 
Sbjct: 61  LGVSLAAIDNIMTQGALQTTGRALDLAIEGNGFFVVKPVDSSGNSVNHPLYTRDGTFYID 120

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-----EISQKGKVIATMGLYSVD 164
             G +V+A G                   +              S   K+   +GL +  
Sbjct: 121 KSGYIVNAQGYRLQSTSNDNIQIADPDKIVSISIGSDGVISVVKSDGTKITYNIGLVTFK 180

Query: 165 MSQGFVRRENSGI---------SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIH 215
             +   R   +           +   P  P  D     ++ GFLE SN +   E   MI 
Sbjct: 181 NPESLQRVGANLWDVTPNVTDPATPTPGAPGTDG-RGYIRSGFLEMSNVDLAQEFTNMII 239

Query: 216 LTQKFNSITTLIDENEKSMLEAI 238
             + + +   +I  +++ + E +
Sbjct: 240 TQRGYQANARVITTSDELLRELV 262


>gi|306846278|ref|ZP_07478839.1| flagellar basal-body rod protein FlgG [Brucella sp. BO1]
 gi|306273273|gb|EFM55142.1| flagellar basal-body rod protein FlgG [Brucella sp. BO1]
          Length = 262

 Score =  175 bits (444), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 48/262 (18%), Positives = 90/262 (34%), Gaps = 21/262 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55
             +  I      A +  L  +A+N++N +T GF+  + +F++++   +            
Sbjct: 1   MKALTIAATGMNAQQLNLEVIANNIANINTTGFKRARAEFTDLLYQSERTAGVPNQANQA 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                      V +         GSF  TG   D AL G  WF ++SP    + TR G F
Sbjct: 61  IVPEGALVGLGVQTAAVRNLHIQGSFNQTGNPYDVALTGRGWFQIQSPTGETLYTRAGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE-KGEISQKGKVIATMGLYSVDM 165
               DG LV+  G      +   P  I            K +       +  + L +   
Sbjct: 121 NKNADGQLVTLDGNPVEPAITIPPDAIEVTITDTGQVFAKLQDQINQVDLGQLTLANFTN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +                      ++K+G+LE SN + + E+  +I   + +
Sbjct: 181 EAGLEPLGGNLYRETEASGSPLVGVPGDPGYGSIKQGYLEASNVDPVKEITDLITAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNIA 242
              + +I   ++      +N+ 
Sbjct: 241 EMNSKVIQAADEMAATVSKNLR 262


>gi|328948268|ref|YP_004365605.1| flagellar basal-body rod protein FlgF [Treponema succinifaciens DSM
           2489]
 gi|328448592|gb|AEB14308.1| flagellar basal-body rod protein FlgF [Treponema succinifaciens DSM
           2489]
          Length = 266

 Score =  175 bits (444), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 56/263 (21%), Positives = 109/263 (41%), Gaps = 24/263 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIK-------- 49
           M   + IG +   A + RL T+++N++N DT GF+       +FSE++            
Sbjct: 1   MIRGWYIGASGMNAQQNRLDTISNNLANVDTTGFKKEIPVNKEFSELLLRRTVADGVYKT 60

Query: 50  --------NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101
                   + I      V + + Y     GSF ST T+ D AL G+ +F +++P G   T
Sbjct: 61  PFGSADAVSIIGSIGLGVETNELYTDFSQGSFKSTDTKTDMALGGEGFFTVQTPAGERYT 120

Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLY 161
           R+G F +  +G L++  G   +    +  I +P      N       ++  +++  + + 
Sbjct: 121 RNGNFHLGKEGILLTKEGYPVLG--ENGAIHVPNDKFFVNQDGMIYTNEDNELVDRIKVV 178

Query: 162 SVDMSQGFVRRENSGISPNI---PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
             +  +   ++ +S  + N         E      + +G+ E SN N + EM QMI + +
Sbjct: 179 RFENERFLKKQGSSLWNSNEISGDAYIAEGDERPRLLQGYTEASNVNVVNEMVQMIEVNR 238

Query: 219 KFNSITTLIDENEKSMLEAIRNI 241
            + +    +   +  M      +
Sbjct: 239 AYEANQKSVQTEDSMMDTLWSKV 261


>gi|171059410|ref|YP_001791759.1| flagellar basal-body rod protein FlgG [Leptothrix cholodnii SP-6]
 gi|170776855|gb|ACB34994.1| flagellar basal-body rod protein FlgG [Leptothrix cholodnii SP-6]
          Length = 260

 Score =  175 bits (444), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 45/257 (17%), Positives = 94/257 (36%), Gaps = 20/257 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  I      A + +L  V++N++N  T G++     F +++               
Sbjct: 1   MMRALWISKTGMEAQQTQLDVVSNNLANVATNGYKKSHAVFEDLMYQTLRQSGAASSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                 Q    V +         G+   +G  LD A++G+ +F ++ P G    TRDG F
Sbjct: 61  QLPTGLQVGLGVRTVATSRQFTQGNLQQSGNTLDVAIKGNGFFPIQMPDGTTGYTRDGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165
           +V+  G LV+++G      +               V           +V+  + + +   
Sbjct: 121 QVSATGQLVTSAGYAVQPGITIPADAQTVTIAPDGVVSVALPGQTAPQVLGQLQVANFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   +  +  +           +       ++ +GFLE SN N + E+  MI   + +
Sbjct: 181 PAGLEAKGGNLYTETASSGTPNGGAPGSNGLGSLSQGFLETSNVNVVEELVTMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEA 237
              +  I  +++ + + 
Sbjct: 241 ELNSKAISTSDQMLQKL 257


>gi|254516991|ref|ZP_05129049.1| flagellar basal-body rod protein FlgG [gamma proteobacterium
           NOR5-3]
 gi|219674496|gb|EED30864.1| flagellar basal-body rod protein FlgG [gamma proteobacterium
           NOR5-3]
          Length = 261

 Score =  175 bits (444), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 47/261 (18%), Positives = 95/261 (36%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A + ++ST+A+N++N  T GF+  +  F +++      +        
Sbjct: 1   MNQSLWISKTGLDAQQTKMSTIANNLANVGTTGFKRGRAIFEDLIYQNVRQVGSQSSQDT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  +             G+   T + LD A++G  +F +  P      TRDG F
Sbjct: 61  LLPSGLQIGTGTRVVATEKLFTQGNLTKTDSALDIAIQGRGFFEILLPDGNQAFTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           ++ D G +V+++G      +      +         V  +   +     I  + L     
Sbjct: 121 QINDQGIVVTSAGYQVQPPITVPQDALSVTIANDGTVSVQQPGTAASTQIGLVQLTDFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   R  +    +      +  +       T+ +G++E SN N + E+  MI   + +
Sbjct: 181 PSGLQARGENLFLESGASGAPQPGNPGLNGLGTLSQGYVESSNVNVVEELVNMIETQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
              +  I   ++ +     N+
Sbjct: 241 EMNSRAISTADQMLQYISNNL 261


>gi|224372657|ref|YP_002607029.1| flagellar basal body rod protein FlgG [Nautilia profundicola AmH]
 gi|223588586|gb|ACM92322.1| flagellar basal-body rod protein FlgG [Nautilia profundicola AmH]
          Length = 262

 Score =  175 bits (443), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 47/261 (18%), Positives = 103/261 (39%), Gaps = 21/261 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S        +A + ++  V++N+SN +T+G++  + +F+++                
Sbjct: 1   MVRSLYTAATGMMAQQMQIDVVSNNISNVNTIGYKKQRAEFADLFYQTMEYAGTSTSTTT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                      V           G+F  TG  LD A++GD +F ++ P   I  TRDG F
Sbjct: 61  QSPTGINVGLGVRPTAVTKIFSQGNFKETGNNLDVAIQGDGFFQVQLPDGRIAYTRDGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           K+  DG++V++ G   + ++      +         V        + + I  + +     
Sbjct: 121 KLDADGNIVTSDGYKLIPNITLPADTVQVSIGTDGTVSVLEAGQTQMQQIGQIEIAKFIN 180

Query: 166 SQGFVRRENSGIS-PNIPPTPLED----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++          P+           +++GF+E SN   + EM  +I   + +
Sbjct: 181 PAGLHSLGSNLYIDTTASGDPIVSTPGLDGTGELRQGFVEMSNVQLVEEMTDLITGQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
           ++ +  I  +++ + + + N+
Sbjct: 241 DAASKAIVTSDEML-QTVNNL 260


>gi|219684180|ref|ZP_03539124.1| flagellar basal-body rod protein FlgG [Borrelia garinii PBr]
 gi|219672169|gb|EED29222.1| flagellar basal-body rod protein FlgG [Borrelia garinii PBr]
          Length = 265

 Score =  175 bits (443), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 49/263 (18%), Positives = 93/263 (35%), Gaps = 23/263 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +     +   A +  + T+A+N+SN +T GF+ I+ +F +++   +N          
Sbjct: 1   MMRALWTAASGMTAQQYNVDTIANNLSNVNTTGFKKIRAEFEDLIYQTQNRAGTPATENT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                                E G   ST    D A+EGD ++ +  P G    TRDG F
Sbjct: 61  LRPLGNQVGHGTKIAATQRIFEQGKMQSTNLLTDVAIEGDGFYKILMPDGTYAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNV---GEKGEISQKGKVIATMGLYSV 163
           K+  +  LV++ G   + ++      I     I        K + S +   +  + +   
Sbjct: 121 KIDSNRELVTSQGYKVLPNIFFPEEYIQNSITISEQGIVSVKTDNSNEPIELGQIEISRF 180

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
               G     ++                       +++G LE SN +   EM  MI   +
Sbjct: 181 VNPAGLSAIGSNLFKETAGSGQEITGIPGSEGMGILRQGILEMSNVSIAEEMVTMIVAQR 240

Query: 219 KFNSITTLIDENEKSMLEAIRNI 241
            +   +  I  ++  +     N+
Sbjct: 241 AYEINSKAIQTSDNMLG-IANNL 262


>gi|218461633|ref|ZP_03501724.1| flagellar basal body rod protein FlgF [Rhizobium etli Kim 5]
          Length = 244

 Score =  175 bits (443), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 109/242 (45%), Positives = 164/242 (67%), Gaps = 1/242 (0%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           MQ+   + L++Q+ALE+RL+T+ADNM+N +T GFR  +VKF E+V A KN ++ K++FV+
Sbjct: 1   MQSGLYVSLSSQMALEKRLNTIADNMANVNTTGFRATEVKFDEMVAATKNKLNTKVAFVS 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
            G +YL+++ G    TG  LDFA++GDAWFAL++P G +LTRDGRF + D G LVS  G 
Sbjct: 61  QGNDYLNEQNGELQHTGNMLDFAIKGDAWFALDTPAGRVLTRDGRFTIKDTGELVSIRGY 120

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
            PVLD    PIQ+  K     VG  G I Q G+ + ++GL+  D+S+G++R ENSGI   
Sbjct: 121 -PVLDAGGAPIQLDTKAGEPAVGTDGVIYQTGRQVGSLGLFEADISKGYLRYENSGIMTT 179

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
             P  + D   V V++G+LE+SN N+M E+ Q+I + + F SI++L+ ++E S  EA++ 
Sbjct: 180 DQPRAVVDRFNVGVEQGYLENSNVNAMREITQLIEVNRAFESISSLMRDSEDSFKEAVQT 239

Query: 241 IA 242
           + 
Sbjct: 240 LG 241


>gi|322421663|ref|YP_004200886.1| flagellar basal-body rod protein FlgF [Geobacter sp. M18]
 gi|320128050|gb|ADW15610.1| flagellar basal-body rod protein FlgF [Geobacter sp. M18]
          Length = 238

 Score =  175 bits (443), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 56/242 (23%), Positives = 102/242 (42%), Gaps = 6/242 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       L   L+ ++RL  +++N++N  T GF+  +++F  ++ ++KN    +    +
Sbjct: 1   MNAGMYAALTGNLSAQRRLDVISNNLANASTTGFKADQIQFESILASVKNS--TEGPVFS 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           + +       G    T   LD ALEGD +F + +P+G   TR G F     G LV+A G 
Sbjct: 59  NDRYSTDFSSGGLQRTDNALDVALEGDGFFVVNTPQGTAYTRQGNFHRGPGGKLVTADGY 118

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
                  +V +          +G  G++S  G V+  + +           +  +G+   
Sbjct: 119 EVQGGGGTVTL---NGGSKIEIGSNGQVSVDGNVVGNIAVVDFPKPYAL-EKAGNGLYLP 174

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
             P      S   VK+G+LE SN   + EM +MI  ++ F      +   +     A  +
Sbjct: 175 ANPQTATTASTAGVKQGYLESSNVKVVVEMARMIEASRYFEICAKAVKTYDDLNARAAND 234

Query: 241 IA 242
           + 
Sbjct: 235 LG 236


>gi|154249604|ref|YP_001410429.1| flagellar basal-body rod protein FlgG [Fervidobacterium nodosum
           Rt17-B1]
 gi|154153540|gb|ABS60772.1| flagellar basal-body rod protein FlgG [Fervidobacterium nodosum
           Rt17-B1]
          Length = 261

 Score =  175 bits (443), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 50/258 (19%), Positives = 97/258 (37%), Gaps = 19/258 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S           + ++ TV++N++N DT G++ IK +F +++ +   +         
Sbjct: 1   MINSLYTAATGMWTQQFKMDTVSNNIANVDTAGYKKIKAEFQDLIYSYSKNAGAATAQNS 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRF 106
                      V           G+  +TG  LD A+ GD +F ++     I  TRDG+F
Sbjct: 61  TTPTGIYVGHGVKLAATTKIFTQGNLENTGNALDLAITGDGFFQIQLQDGRIAYTRDGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           K+   G +V+A+G      +      +        +          + + T+ L      
Sbjct: 121 KLDSQGRVVTANGLLLSPAIVVPQNAVSLTVSPDGIVSVELADGTIQQLGTITLVRFVNP 180

Query: 167 QGFVRRENSGI-SPNIPPTPLE----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221
            G     ++     N    P+E         T+ +G++E SN + + EM  MI   + + 
Sbjct: 181 AGLKSIGDNLYLQTNASGEPIEGVGGQDGFGTIMQGYVEKSNVDVVKEMVDMITAMRAYE 240

Query: 222 SITTLIDENEKSMLEAIR 239
             +  I   ++ +  A  
Sbjct: 241 FNSRSIITADQMLQTASN 258


>gi|312880335|ref|ZP_07740135.1| flagellar basal-body rod protein FlgG [Aminomonas paucivorans DSM
           12260]
 gi|310783626|gb|EFQ24024.1| flagellar basal-body rod protein FlgG [Aminomonas paucivorans DSM
           12260]
          Length = 262

 Score =  175 bits (443), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 48/263 (18%), Positives = 93/263 (35%), Gaps = 23/263 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G    +A +  L  V++N++N +T G++ ++  F +++  I  +         
Sbjct: 1   MIRSLWSGATGMIAQQTNLDVVSNNLANVNTSGYKKVRADFQDLMYQIDREPGAPVEPAS 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q                G+  +TG   D A+EGD ++ +  P G    TRDG +
Sbjct: 61  MIPTGIQVGLGTRVVGTSRIMGEGNIQTTGNPTDVAIEGDGFYQVTLPDGTLAYTRDGAW 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           ++  +G +V++ G      +                V          + I  + L     
Sbjct: 121 RIDGNGQIVTSDGFLLEPAITIPDNMKELIISTTGQVSVLLPGDPNPQEIGQIQLARFVN 180

Query: 166 SQGFVRRENSGI------SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
             G      +           I   P +D  G T+ +  LE +N   + EM  MI   + 
Sbjct: 181 PGGLRASGKNLFLETPASGAPIVGNPGDDGLGATL-QRVLEMANVQVVEEMVNMIVAQRA 239

Query: 220 FNSITTLIDENEKSMLEAIRNIA 242
           + + +  I   ++ +     N+ 
Sbjct: 240 YEANSKTISTADELL-RIANNLR 261


>gi|88811803|ref|ZP_01127057.1| hypothetical protein NB231_05340 [Nitrococcus mobilis Nb-231]
 gi|88791194|gb|EAR22307.1| hypothetical protein NB231_05340 [Nitrococcus mobilis Nb-231]
          Length = 261

 Score =  175 bits (443), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 54/261 (20%), Positives = 91/261 (34%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +  +      A + R+STVA+N++N +T GF+  + KF ++V         +     
Sbjct: 1   MNPALWVAKTGLDAQQTRMSTVANNLANVNTTGFKKDRAKFEDLVYQTVRQAGGQSSQNN 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                    + V           G+ + TG  LD A+ G  +F +  P G    TRDG F
Sbjct: 61  RLPSGLMLGTGVRVAATQKMFTQGNIVQTGNALDLAINGRGFFEILQPDGTLAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165
           ++ D G +V+A G      +   P                   S     +  + L     
Sbjct: 121 QIDDQGQVVTADGLPLQPAINIPPNAQSVTIGTDGTVSVQLPGSPAPTQVGNLRLTDFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +           +  +        V+ G LE SN N   E+  MI   + F
Sbjct: 181 PAGLKPIGRNLFVQTGASGAPQPGTPGLNGLGLVQAGALESSNVNIAEELVNMIETQRGF 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
            + T  I   ++ +     N+
Sbjct: 241 ETNTRAIQTADQMLQFITNNL 261


>gi|303248239|ref|ZP_07334502.1| flagellar basal-body rod protein FlgG [Desulfovibrio fructosovorans
           JJ]
 gi|302490377|gb|EFL50288.1| flagellar basal-body rod protein FlgG [Desulfovibrio fructosovorans
           JJ]
          Length = 260

 Score =  175 bits (442), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 47/257 (18%), Positives = 97/257 (37%), Gaps = 18/257 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S        +A++ ++ T+++N++N +TVGF+  + +F +++               
Sbjct: 1   MMRSLWTATTGMVAMQMQIDTMSNNLANVNTVGFKKSRAEFEDLMYQTLQVAGTETTGGN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107
                 Q    V     +     G   +TG +LD A++G  +F ++     + TR G FK
Sbjct: 61  RIPTGLQVGLGVKPTTVHKFFTQGDLQNTGNQLDIAIQGQGFFKVDVNGRELYTRAGSFK 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           +  DG++VS+ G       +                   +++        + LY+     
Sbjct: 121 LNQDGTIVSSGGYPLQPTFSVPTDTKTITITENGHLSCLDLNGDTLAETDIPLYTFINPS 180

Query: 168 GFVRRENSGISP-----NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222
           G      +  S              D +  T+ +G+LE SN   + EM  +I   + + +
Sbjct: 181 GMTAEGRNLYSTTQASGTANEVTPGDQNAGTLAQGYLEMSNVELVDEMVGLIVGQRAYEA 240

Query: 223 ITTLIDENEKSMLEAIR 239
            +  I   +  +  A+ 
Sbjct: 241 NSKAITTADGMLQTAVN 257


>gi|225686012|ref|YP_002733984.1| flagellar basal body rod protein FlgG [Brucella melitensis ATCC
           23457]
 gi|256262865|ref|ZP_05465397.1| flagellar basal body rod protein [Brucella melitensis bv. 2 str.
           63/9]
 gi|225642117|gb|ACO02030.1| flagellar basal-body rod protein FlgG [Brucella melitensis ATCC
           23457]
 gi|263092700|gb|EEZ16909.1| flagellar basal body rod protein [Brucella melitensis bv. 2 str.
           63/9]
 gi|326410335|gb|ADZ67399.1| flagellar basal body rod protein FlgG [Brucella melitensis M28]
 gi|326553627|gb|ADZ88266.1| flagellar basal body rod protein FlgG [Brucella melitensis M5-90]
          Length = 262

 Score =  175 bits (442), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 48/262 (18%), Positives = 90/262 (34%), Gaps = 21/262 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55
             +  I      A +  L  +A+N++N +T GF+  + +F++++   +            
Sbjct: 1   MKALTIAATGMNAQQLNLEVIANNIANINTTGFKRARAEFTDLLYQSERTAGVPNQANQA 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                      V +         GSF  TG   D AL G  WF ++SP    + TR G F
Sbjct: 61  IVPEGALVGLGVQTAAVRNLHIQGSFNQTGNPYDVALTGRGWFQIQSPTGETLYTRAGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE-KGEISQKGKVIATMGLYSVDM 165
               DG LV+  G      +   P  I            K +       +  + L +   
Sbjct: 121 NKNADGQLVTLDGNPVEPAITIPPDAIEVTITDTGQVFAKLQDQINQVDLGQLTLANFTN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +                      ++K+G+LE SN + + E+  +I   + +
Sbjct: 181 EAGLEPLGGNLYRETEASGGALVGVPGDPGYGSIKQGYLEASNVDPVKEITDLITAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNIA 242
              + +I   ++      +N+ 
Sbjct: 241 EMNSKVIQAADEMAATVSKNLR 262


>gi|319764541|ref|YP_004128478.1| flagellar basal-body rod protein flgg [Alicycliphilus denitrificans
           BC]
 gi|317119102|gb|ADV01591.1| flagellar basal-body rod protein FlgG [Alicycliphilus denitrificans
           BC]
          Length = 260

 Score =  175 bits (442), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 48/259 (18%), Positives = 96/259 (37%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S  I      A + +L  ++ N++N  T GF+     F +++      +  +     
Sbjct: 1   MINSLWIAKTGMSAQQTQLDVISHNLANVSTTGFKRNSAVFEDLIYQNLRQVGAQTTEEN 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                      V +         GS   +   LD A+ G+ +F ++ P G I  TRDG F
Sbjct: 61  QLPTGLHLGLGVRTVATSRHFTQGSLQQSSNSLDVAINGNGFFEVQLPDGTIGYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           ++   G +V++ G      +            E   V      + + + +  + + S   
Sbjct: 121 QLDAQGRMVTSGGLPVANGITVPQGATSISISETGVVSATIAGNAQPQQLGQLAMSSFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
           + G      +    +    P +     T     +K+GFLE SN N + E+  MI   + +
Sbjct: 181 AAGLQPVGQNMYKESAASGPPQQGQPGTNGLGVIKQGFLETSNVNVVEELVTMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  I  +++ + +  +
Sbjct: 241 EMNSKAIQTSDQMLAKLSQ 259


>gi|256014942|ref|YP_003104951.1| flagellar basal-body rod protein FlgG [Brucella microti CCM 4915]
 gi|255997602|gb|ACU49289.1| flagellar basal-body rod protein FlgG [Brucella microti CCM 4915]
          Length = 262

 Score =  175 bits (442), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 48/262 (18%), Positives = 90/262 (34%), Gaps = 21/262 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55
             +  I      A +  L  +A+N++N +T GF+  + +F++++   +            
Sbjct: 1   MKALMIAATGMNAQQLNLEVIANNIANINTTGFKRARAEFTDLLYQSERTAGVPNQANQA 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                      V +         GSF  TG   D AL G  WF ++SP    + TR G F
Sbjct: 61  IVPEGALVGLGVQTAAVRNLHIQGSFNQTGNPYDVALTGRGWFQIQSPTGETLYTRAGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE-KGEISQKGKVIATMGLYSVDM 165
               DG LV+  G      +   P  I            K +       +  + L +   
Sbjct: 121 NKNADGQLVTLDGNPVEPAITIPPDAIEVTITDTGQVFAKLQDQINQVDLGQLTLANFTN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +                      ++K+G+LE SN + + E+  +I   + +
Sbjct: 181 EAGLEPLGGNLYRETEASGGPLVGVPGDPGYGSIKQGYLEASNVDPVKEITDLITAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNIA 242
              + +I   ++      +N+ 
Sbjct: 241 EMNSKVIQAADEMAATVSKNLR 262


>gi|258592560|emb|CBE68869.1| Flagellar basal-body rod protein flgG (Distal rod protein) [NC10
           bacterium 'Dutch sediment']
          Length = 262

 Score =  175 bits (442), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 48/262 (18%), Positives = 89/262 (33%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +    +A   A +  L  +A+N++N +T GF+  ++ F ++                
Sbjct: 1   MIRALFSAVAGMQAQQLNLDNIANNLANVNTTGFKRSRLDFQDLFYQTYRPAGASTASGA 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q                G    T   LD  +EGD +F +  P   I  TR G F
Sbjct: 61  EIPVGIQVGHGSKPIASQRIYIQGDPQQTENPLDLMIEGDGFFQVLRPDGTIAYTRAGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           K   +G +V++ G     +++     +         V          + I T+ L     
Sbjct: 121 KRDANGRVVTSDGFALQPEVSIPAQAMTIHVGSDGVVSATIPGQTASQQIGTIELSRFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +   P          +       T+ +GFLE SN   + EM  +I   + +
Sbjct: 181 PAGLQSVGRNLSLPTSASGDPTSGAPGTQGLGTIGQGFLELSNVKVVEEMVNLIMSQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNIA 242
            + +  +   ++ + +   NI 
Sbjct: 241 EAGSKAVQAADEML-QVSNNIR 261


>gi|283850807|ref|ZP_06368093.1| flagellar basal-body rod protein FlgG [Desulfovibrio sp. FW1012B]
 gi|283573730|gb|EFC21704.1| flagellar basal-body rod protein FlgG [Desulfovibrio sp. FW1012B]
          Length = 260

 Score =  175 bits (442), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 47/257 (18%), Positives = 103/257 (40%), Gaps = 18/257 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S        +A++ ++ T+++N++N +TVGF+  + +F +++   +     +     
Sbjct: 1   MMRSLWTATTGMVAMQMQIDTMSNNLANVNTVGFKKSRAEFEDLMYQTQQVAGTETVGGN 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107
                      V     +     G   +TG +LD A++G+ +F ++     + TR G FK
Sbjct: 61  RLPTGLQVGLGVKPTTVHKFFTQGDLQNTGNQLDIAIQGEGFFKVDVNGRDLYTRAGSFK 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           +  DG++V+A+G       +                   + +   +    + LY+   S 
Sbjct: 121 LNQDGTIVTANGYPLQPAFSVPAGTKSITITENGHLSCLDQNGAAQGETDIPLYTFINSP 180

Query: 168 GFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222
           G      +  S        ++++       T+ +GFLE SN   + EM  +I   + + +
Sbjct: 181 GLTAEGRNLYSTTQASGDAQEVTPGDQNAGTLAQGFLEMSNVELVDEMVGLIVGQRAYEA 240

Query: 223 ITTLIDENEKSMLEAIR 239
            +  I   +  +  A+ 
Sbjct: 241 NSKAITTADGMLQTAVN 257


>gi|255021356|ref|ZP_05293404.1| Flagellar basal-body rod protein flgG [Acidithiobacillus caldus
           ATCC 51756]
 gi|254969219|gb|EET26733.1| Flagellar basal-body rod protein flgG [Acidithiobacillus caldus
           ATCC 51756]
          Length = 261

 Score =  175 bits (442), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 46/261 (17%), Positives = 96/261 (36%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  +        + ++  +A+N++N +T GF+  +  F +++               
Sbjct: 1   MMRSLYVAATGLEGEQTKMDVIANNLANVNTTGFKQSRAVFQDLLYQNLRQPGAQSSQTT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+  STG  LD  + G  +F +  P   I  TRDG F
Sbjct: 61  QYPSGLQLGTGVRVVATERLMTQGNLTSTGNALDLGINGQGFFQIMQPDGTIAYTRDGTF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165
           ++ + G LV+++G      +   P                     + + + ++ L +   
Sbjct: 121 QLNNQGQLVTSNGYLLQPPVTIPPNAQSITIGTDGTVSVVLPGQSQPQQVGSIQLANFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++           +          +V++G+LE SN N + E+  MI   + +
Sbjct: 181 PTGLQSIGDNLYLQTGSSGAPQTGQPTLNGLGSVQQGYLESSNVNVVSELVDMIATQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
              +  +  ++  +  AI+N+
Sbjct: 241 EINSKAVSTSDSMLGYAIQNL 261


>gi|218673219|ref|ZP_03522888.1| flagellar basal body rod protein FlgF [Rhizobium etli GR56]
          Length = 244

 Score =  174 bits (441), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 107/242 (44%), Positives = 164/242 (67%), Gaps = 1/242 (0%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           MQ+   + L++Q+ALE+RL+T+ADNM+N +T GFR  +VKF E+V A KN ++ K++FV+
Sbjct: 1   MQSGLYVSLSSQMALEKRLNTIADNMANVNTTGFRATEVKFDEMVAATKNKLNTKVAFVS 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
            G +YL+++ G    TG  LDFA++GDAWF+L++P G +LTRDGRF + + G LVS  G 
Sbjct: 61  QGNDYLNEQSGELQHTGNMLDFAVKGDAWFSLDTPAGRVLTRDGRFTIKETGELVSIRGY 120

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
            PVLD    PIQ+  K     VG  G I Q G+ + ++GL+  D+S+G++R ENSGI   
Sbjct: 121 -PVLDAGGAPIQLDTKAGEPAVGTDGVIYQAGRQVGSLGLFEADISKGYLRYENSGIMTT 179

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
             P  + D   V V++G+LE+SN N+M E+ Q+I + + F SI++L+ ++E S  EA++ 
Sbjct: 180 DQPRAVVDRFNVGVEQGYLENSNVNAMREITQLIEVNRAFESISSLMRDSEDSFKEAVQT 239

Query: 241 IA 242
           + 
Sbjct: 240 LG 241


>gi|308185371|ref|YP_003929504.1| flagellar basal body rod protein FlgG [Helicobacter pylori SJM180]
 gi|308061291|gb|ADO03187.1| flagellar basal body rod protein FlgG [Helicobacter pylori SJM180]
          Length = 262

 Score =  174 bits (441), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 45/261 (17%), Positives = 91/261 (34%), Gaps = 21/261 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S     +  LA +  + T ++N++N +T GF+  +  F+++                
Sbjct: 1   MLRSLYSATSGMLAQQTHIDTTSNNIANVNTTGFKKSRADFNDLFYQAMQYAGTNTSNTT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                      V           GS   T   LD A+ G  +F ++ P      TR G F
Sbjct: 61  LSPDGMEVGLGVRPSAITKMFSQGSPKETENNLDIAITGKGFFQVQLPDGTTAYTRSGNF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQKGKVIATMGLYSVDM 165
           K+ + G+LV++ G   +  +            +       +       VI  + L +   
Sbjct: 121 KLDEQGNLVTSEGYLLIPQITLPEDTTQVNIGVDGTVSVTQGLQTTSNVIGQITLANFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++  S           +        +++GFLE SN   + EM  +I   + +
Sbjct: 181 PAGLHSMGDNLFSITNASGDAIVGNPDSQGLGKLRQGFLELSNVKLVEEMTDLITAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
            + +  I   +  + + + ++
Sbjct: 241 EANSKSIQTADAML-QTVNSL 260


>gi|254780685|ref|YP_003065098.1| flagellar basal body rod protein FlgF [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040362|gb|ACT57158.1| flagellar basal body rod protein FlgF [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 243

 Score =  174 bits (441), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 243/243 (100%), Positives = 243/243 (100%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA
Sbjct: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK
Sbjct: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
           YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN
Sbjct: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
           IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN
Sbjct: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240

Query: 241 IAS 243
           IAS
Sbjct: 241 IAS 243


>gi|209547922|ref|YP_002279839.1| flagellar basal body rod protein FlgF [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209533678|gb|ACI53613.1| flagellar basal body rod protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 244

 Score =  174 bits (441), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 106/242 (43%), Positives = 162/242 (66%), Gaps = 1/242 (0%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           MQ+   + L++Q+ALE+RL+T+ADNM+N +T GFR  +VKF E+V A KN ++ K++FV+
Sbjct: 1   MQSGLYVSLSSQMALEKRLNTIADNMANVNTTGFRATEVKFDEMVAATKNKLNTKVAFVS 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
            G +YL++  G    TG  LDFA++GDAWF+L++P G +LTRDGRF + D G LVS  G 
Sbjct: 61  QGNDYLNESNGELQHTGNMLDFAIKGDAWFSLDTPAGRVLTRDGRFTLKDTGELVSIRGY 120

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
            PVLD    PIQ+  K     VG  G I Q  + + ++GL+  D+S+G++R ENSGI   
Sbjct: 121 -PVLDAGGAPIQLNSKGGEPAVGTDGIIYQGDRQVGSLGLFEADISKGYLRYENSGIMTT 179

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
             P  + D   V V++G+LE+SN N+M E+ Q+I + + F S+++L+ ++E S  EA++ 
Sbjct: 180 DQPRAVVDRFNVGVEQGYLENSNVNAMREITQLIEVNRAFESVSSLMRDSEDSFKEAVQT 239

Query: 241 IA 242
           + 
Sbjct: 240 LG 241


>gi|319787119|ref|YP_004146594.1| flagellar basal-body rod protein FlgG [Pseudoxanthomonas suwonensis
           11-1]
 gi|317465631|gb|ADV27363.1| flagellar basal-body rod protein FlgG [Pseudoxanthomonas suwonensis
           11-1]
          Length = 261

 Score =  174 bits (441), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 52/261 (19%), Positives = 92/261 (35%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  +      A + R+S VA+N++NT+T GF+  +  F +++               
Sbjct: 1   MNQALWVAKTGLDAQQTRMSVVANNLANTNTTGFKRDRANFEDLLYQQVRQPGGSTSAQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V         + G+   TG  LD  + G  +F +  P G    TRDG F
Sbjct: 61  QLPSGLQLGTGVRVVSTAKDFQQGNPQQTGRALDVMINGRGFFEVLMPDGTSAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           +V   G LV++SG      +                +  +     +   I  + L     
Sbjct: 121 QVNAQGELVTSSGYPVQPGIQVPEGAQSMTIGTDGTITVQMAGDGQALEIGALTLTDFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   R  +         P ++ +        V++G LE SN N + E+  MI   + +
Sbjct: 181 PAGLQARGENLYMETTASGPAQNGTPGLNGLGLVEQGALEGSNVNVVEELVSMIETQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
                 I   +  +     N+
Sbjct: 241 EMNAKAISTTDSMLGYLNNNV 261


>gi|120613061|ref|YP_972739.1| flagellar basal-body rod protein FlgG [Acidovorax citrulli AAC00-1]
 gi|326319099|ref|YP_004236771.1| flagellar basal-body rod protein FlgG [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|120591525|gb|ABM34965.1| flagellar basal-body rod protein FlgG [Acidovorax citrulli AAC00-1]
 gi|323375935|gb|ADX48204.1| flagellar basal-body rod protein FlgG [Acidovorax avenae subsp.
           avenae ATCC 19860]
          Length = 260

 Score =  174 bits (441), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 49/259 (18%), Positives = 96/259 (37%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S  I      A + +L  ++ N++N  T G++     F +++      +  +     
Sbjct: 1   MINSLWIAKTGMSAQQTQLDVISHNLANVSTTGYKRNNAVFEDLIYQNLRQVGAQTTEQN 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                      V +     +   GS   +   LD A+ G+ +F +  P G    TRDG F
Sbjct: 61  QLPTGLHLGLGVRTVATSRNFTQGSLAQSNNNLDVAINGNGFFQVTMPDGTTGYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           ++   G LV++SG      +                V      +   + I T+G+ S   
Sbjct: 121 QLDSQGRLVTSSGLPVANGITVPANATGISISTDGIVSATVPGTTAPQQIGTLGMASFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
           S G      +    +      +  +  T     +++GFLE SN N + E+  MI   + +
Sbjct: 181 SAGLEPIGQNLFKESAASGQPQQGTPGTNGLGIIRQGFLETSNVNVVEELVSMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  I  +++ + +  +
Sbjct: 241 EMNSKAIQTSDQMLAKLAQ 259


>gi|83589649|ref|YP_429658.1| hypothetical protein Moth_0797 [Moorella thermoacetica ATCC 39073]
 gi|83572563|gb|ABC19115.1| conserved hypothetical protein [Moorella thermoacetica ATCC 39073]
          Length = 253

 Score =  174 bits (441), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 55/257 (21%), Positives = 102/257 (39%), Gaps = 20/257 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKN-----DI 52
           M     +     L  E R   +++N++N  T GF++       F E++           I
Sbjct: 1   MLRGLYLASTGMLVQEMRQDVISNNLANATTGGFKSAVATVRSFPEMLLQRLEKNQAIPI 60

Query: 53  DQKISFVASGKEYLSKEVGSFISTGTELDFALEGD------AWFALESPRGIILTRDGRF 106
                 V     Y + E G    TG   D AL         A+F + +P G   TR+G+F
Sbjct: 61  GPFSPGVMVDNIYTNTEPGPLTETGHATDLALVQPGVGVSPAFFVVRTPGGEAYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           +V   G LV+A G      +      I      F V   G I   G+V+  + + +    
Sbjct: 121 QVDPGGWLVTAEGY----PVQGQNGDIYVGTTDFKVDAGGRILVNGQVVDQLRVVTFANP 176

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
               R+ ++      P       +   VK+G+LE+SN +   E+  M+ + + + +   +
Sbjct: 177 ALLQRQGDTLF--TAPGAQALPAANFQVKQGWLEESNVDLARELVDMLAVLRSYEANQKV 234

Query: 227 IDENEKSMLEAIRNIAS 243
           I   ++++ +++  + S
Sbjct: 235 IQTEDQTLAKSVNEVGS 251


>gi|119503646|ref|ZP_01625729.1| hypothetical protein MGP2080_03865 [marine gamma proteobacterium
           HTCC2080]
 gi|119460708|gb|EAW41800.1| hypothetical protein MGP2080_03865 [marine gamma proteobacterium
           HTCC2080]
          Length = 261

 Score =  174 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 46/261 (17%), Positives = 95/261 (36%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A + +++T+++N++N  T GF+  +V F +++      +        
Sbjct: 1   MSQSLWIAKTGLDAQQTKMATISNNLANAGTNGFKRGRVIFEDLLYQNVRQVGAQSSQDT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  +             G+   T   LD A++G  +  +  P      TRDG F
Sbjct: 61  VLPSGLQVGTGARVVATERLFTQGNLSQTDNPLDLAIQGRGFVEVLMPDGSQGFTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           ++ D G +V+A+G      +      +         V  +   + +   +  + L     
Sbjct: 121 QINDQGVMVTAAGYQVQPPITIPQDALSISIAPDGTVSVQQPGTPQATQVGVIQLTDFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   R  +              +       T+++GF+E SN N + E+  MI   + +
Sbjct: 181 PSGLQARGENLFLETGASGAPLPGNPGLNGLGTLQQGFVEGSNVNVVEELVNMIETQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
              +  I   ++ +    +N+
Sbjct: 241 EMNSKAISTADQMLQYVSQNL 261


>gi|323704840|ref|ZP_08116417.1| flagellar basal-body rod protein FlgF [Thermoanaerobacterium
           xylanolyticum LX-11]
 gi|323535766|gb|EGB25540.1| flagellar basal-body rod protein FlgF [Thermoanaerobacterium
           xylanolyticum LX-11]
          Length = 248

 Score =  174 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 51/253 (20%), Positives = 104/253 (41%), Gaps = 18/253 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVG--------AIK 49
           M        +  +A ++ +  +++N++N +T G++   V    F + +            
Sbjct: 1   MLRGLYTASSGMIAQQKIVDVLSNNIANVNTAGYKKDTVTTMAFPDYMVTRNGGDNVPYN 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109
            +I      V       +   G    T  +LDFA++G  +F + +P G+  TRDG F + 
Sbjct: 61  GNIGTMDYGVLVETFNTNFSEGDIEKTDGKLDFAIDGSGFFTVSTPSGVRYTRDGSFTLN 120

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169
           ++G LV+  G Y +         I   +   +V E G IS  G+V+  + +         
Sbjct: 121 NNGYLVTKDGYYVL----GQNGPIQLNNGDISVDESGNISVNGQVVDKLNIVDFANYNTL 176

Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
            +  N+              +   VK+G+LE SN N + EM  MI   + + +    +  
Sbjct: 177 RKEGNNLFFTTGG---QAIPATSKVKQGYLEGSNVNPVDEMVTMISAMRTYEANQKSVSA 233

Query: 230 NEKSMLEAIRNIA 242
            ++++ +++  + 
Sbjct: 234 FDETLDKSVNEVG 246


>gi|238755322|ref|ZP_04616665.1| Flagellar basal-body rod protein flgG [Yersinia ruckeri ATCC 29473]
 gi|238706458|gb|EEP98832.1| Flagellar basal-body rod protein flgG [Yersinia ruckeri ATCC 29473]
          Length = 260

 Score =  174 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 90/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A +  +  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTMRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           G+   T    D A++G  +F ++ P G    TRDG F
Sbjct: 61  TLPSGLQIGTGVRPVATERLHSQGNLSKTDNSKDIAIKGQGFFQVQLPDGTNAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           ++  +G LV+ASG      +      +         V    +     + +  + L +   
Sbjct: 121 QMDQNGQLVTASGFQVQPAITIPANALSITVGRDGIVSVTQQGQTAAQQVGQLTLTTFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +            + +        + +G++E SN N   E+  MI   + +
Sbjct: 181 DSGLESVGENLYQETASSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ + +  +
Sbjct: 241 EINSKAVTTSDQMLQKLTQ 259


>gi|258514011|ref|YP_003190233.1| hypothetical protein Dtox_0696 [Desulfotomaculum acetoxidans DSM
           771]
 gi|257777716|gb|ACV61610.1| protein of unknown function DUF1078 domain protein
           [Desulfotomaculum acetoxidans DSM 771]
          Length = 263

 Score =  174 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 54/260 (20%), Positives = 99/260 (38%), Gaps = 23/260 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  S   G++     + R+  + +N++N +T G+++ +V+F +V+G       Q  S V 
Sbjct: 1   MIRSLYSGVSGMKNHQTRMDVIGNNIANVNTTGYKSSRVQFKDVLGQTIAG-GQVASGVT 59

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI---ILTRDGRFKVTDDGSLVSA 117
                     GS  +T    D  + G+ +F ++ P        TRDG F V D G LV++
Sbjct: 60  IAGINKDFTQGSQTATENSTDLYIHGNGFFIVQDPGDPSILYYTRDGSFHVDDTGQLVNS 119

Query: 118 SGKYPV-------LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170
            G           +D  +VP+     D    +      S   +    +GL   +     +
Sbjct: 120 LGYKVCSSDGSTEIDPFTVPLDSINIDMNGKISYCTGGSTTPEDGGQIGLAMFNDLNRLI 179

Query: 171 RRENSGISPNIPPTPLEDLSG------------VTVKRGFLEDSNANSMYEMGQMIHLTQ 218
            + N+    +  P                     TV    LE SN +   E   MI   +
Sbjct: 180 NKGNNLYQYDNKPNTDGSDPAEPIFGAPGSIGLGTVISNNLEMSNVDLTNEFSNMIITQR 239

Query: 219 KFNSITTLIDENEKSMLEAI 238
            + + + +I  +++ + E I
Sbjct: 240 GYQANSKVITTSDEMLQELI 259


>gi|229825258|ref|ZP_04451327.1| hypothetical protein GCWU000182_00611 [Abiotrophia defectiva ATCC
           49176]
 gi|229790630|gb|EEP26744.1| hypothetical protein GCWU000182_00611 [Abiotrophia defectiva ATCC
           49176]
          Length = 274

 Score =  174 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 56/274 (20%), Positives = 104/274 (37%), Gaps = 33/274 (12%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S     +  +A +  L T+++N++N +T GF+T  ++F  ++               
Sbjct: 1   MLRSLWSAASGMMAQQVNLDTISNNIANINTTGFKTQSMEFKSLLYQQLKTKSTDSEGNP 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                Q    V +         G+ + TG  LD  ++G+ +FA++       TR+G    
Sbjct: 61  KPIGVQVGLGVRNASITAKFTQGAALDTGEMLDLFIQGNGFFAVKVGEKTAYTRNGHMVF 120

Query: 109 T--DDGSLVSASGKYPVLDMASVPIQIPQKDEI------------FNVGEKGEISQKGKV 154
           +   DG  ++ S   P+L     PI+I  K +               V +K   + K   
Sbjct: 121 SSVADGWELTTSDGNPILSTKGTPIKIDSKWDPKDISIDLSGNVLHRVDDKEAGTTKYDN 180

Query: 155 IATMGLYSVDMSQGFVRRENSGISPN------IPPTPLEDLSGVTVKRGFLEDSNANSMY 208
              + LY  +   G  R   S                   L+   +K G+LE SN ++  
Sbjct: 181 FGKIALYQFNNPAGLNRSGGSLYYETPASGEARSEDTDAGLNKSLIKSGYLEGSNVSAAD 240

Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           EM  MI   + +   +  I  +++ + +A  N+ 
Sbjct: 241 EMVNMIVTQRAYQLNSKAITASDEMLEQA-NNLR 273


>gi|222053732|ref|YP_002536094.1| flagellar basal-body rod protein FlgG [Geobacter sp. FRC-32]
 gi|221563021|gb|ACM18993.1| flagellar basal-body rod protein FlgG [Geobacter sp. FRC-32]
          Length = 262

 Score =  174 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 87/259 (33%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +     +   A +  +  VA+N++N +T GF+  +  F +++               
Sbjct: 1   MIRALWTAASGMQAQQLNIDVVANNLANVNTTGFKKSRADFHDLMYQSMKTSGAPSTNAT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q                G+   TG ELD A+EGD +F ++ P      TR G F
Sbjct: 61  QIPTGIQVGLGSKPAAVTKIFTTGNVTQTGNELDVAIEGDGFFQIQMPDGSTEYTRAGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           K    G +V++ G   + ++                V            + T+ L +   
Sbjct: 121 KKDSQGRVVTSEGYPLLPEVVIPNNTTSITIGNDGTVSVIQSGQTSPTSVGTIQLATFSN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   + ++                      T+ +G+LE SN +   EM  MI   + +
Sbjct: 181 PAGLSSQGHNLFKETESSGAATTGTSGQNGIGTLSQGYLEMSNVSVAEEMVNMIVGQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +   ++ +  A  
Sbjct: 241 EINSKAVQAADEMLQTANN 259


>gi|332525064|ref|ZP_08401244.1| flagellar basal-body rod protein FlgG [Rubrivivax benzoatilyticus
           JA2]
 gi|332108353|gb|EGJ09577.1| flagellar basal-body rod protein FlgG [Rubrivivax benzoatilyticus
           JA2]
          Length = 260

 Score =  174 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 46/257 (17%), Positives = 92/257 (35%), Gaps = 20/257 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I        + +L  +++N++N  T GF+   V+F +++               
Sbjct: 1   MLRSLWIAKTGMEGQQTKLDVISNNLANVGTNGFKRGGVQFEDLIYQNLRQAGAASSEQS 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                 Q    V +     +   G+   TG   D A++G+ +F ++ P G    TRDG F
Sbjct: 61  TLPTGLQVGLGVRAAGTTRNFSQGNLQQTGNSYDIAIKGNGFFQIQMPDGTTGYTRDGGF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           +V + G LV+  G      +                V      +     +  + L +   
Sbjct: 121 QVDNAGQLVTNQGYPVQPGITIPADAKTVTVADDGTVQVTTAGNATPTTVGQLQLANFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +  +           +  T     +++GF+E SN N + E+  MI   + +
Sbjct: 181 PAGLESLGGNLYAETAASGTPNTGTPGTNELGALQQGFVETSNVNVVEELVNMIATQRAY 240

Query: 221 NSITTLIDENEKSMLEA 237
              +  I  +++ + + 
Sbjct: 241 ELNSKAIQTSDQMLQKL 257


>gi|125975104|ref|YP_001039014.1| protein of unknown function DUF1078-like protein [Clostridium
           thermocellum ATCC 27405]
 gi|256003242|ref|ZP_05428234.1| flagellar basal-body rod protein FlgG [Clostridium thermocellum DSM
           2360]
 gi|281418478|ref|ZP_06249497.1| fagellar hook-basal body protein [Clostridium thermocellum JW20]
 gi|125715329|gb|ABN53821.1| protein of unknown function DUF1078-like protein [Clostridium
           thermocellum ATCC 27405]
 gi|255992933|gb|EEU03023.1| flagellar basal-body rod protein FlgG [Clostridium thermocellum DSM
           2360]
 gi|281407562|gb|EFB37821.1| fagellar hook-basal body protein [Clostridium thermocellum JW20]
 gi|316939269|gb|ADU73303.1| flagellar hook-basal body protein [Clostridium thermocellum DSM
           1313]
          Length = 266

 Score =  174 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 55/265 (20%), Positives = 109/265 (41%), Gaps = 25/265 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +     +   A +  +  +A+N+SN +T  ++  +++F +++    N          
Sbjct: 1   MMRALWTAGSGMTAQQLNVDVIANNLSNVNTTAYKKERLEFKDMLYDTLNRAYILDGEGR 60

Query: 54  ----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKV 108
               Q            + + G+F  T   LD A++GD +F +  PR  I+ TRDG FK+
Sbjct: 61  PVNLQVGYGTVPMATLKNFQSGNFEKTDNPLDLAIDGDGFFMVLGPRGDIVYTRDGSFKI 120

Query: 109 T--DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG------KVIATMGL 160
           +  ++G++++ S  YPVLD + V I +       NV   GE+S          +   +GL
Sbjct: 121 SVTENGNMLTTSDGYPVLDESGVEIILDIDISKLNVSSDGELSYTDENGVVVPLGQRIGL 180

Query: 161 YSVDMSQGFVRRENSGISPNIPP----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
                  G     ++  +            E      +++ +LE SN   + EM ++I  
Sbjct: 181 VKFPNRNGLESIGSNFYASTSASGEAVPDEELGKKSNIRQYYLESSNVQVVEEMVKLIVA 240

Query: 217 TQKFNSITTLIDENEKSMLEAIRNI 241
            + +   +  I   ++ +     N+
Sbjct: 241 QRAYEINSKAIQSADEMLG-IANNL 264


>gi|109946869|ref|YP_664097.1| flagellar basal body rod protein FlgG [Helicobacter acinonychis
           str. Sheeba]
 gi|109714090|emb|CAJ99098.1| flagellar basal-body rod protein FlgG [Helicobacter acinonychis
           str. Sheeba]
          Length = 262

 Score =  174 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 45/261 (17%), Positives = 91/261 (34%), Gaps = 21/261 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S     +  LA +  + T ++N++N +T GF+  +  F+++                
Sbjct: 1   MLRSLYSATSGMLAQQTHIDTTSNNIANVNTTGFKKSRADFNDLFYQAMQYAGTNTSNTT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                      V           GS   T   LD A+ G  +F ++ P      TR G F
Sbjct: 61  LSPDGMEVGLGVRPSAITKMFSQGSPKETENNLDVAIVGKGFFQVQLPDGTTAYTRSGNF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQKGKVIATMGLYSVDM 165
           K+ + G+LV++ G   +  +            +       +       VI  + L +   
Sbjct: 121 KLDEQGNLVTSEGYLLIPQITLPEDTTQVNIGVDGTVSVTQGLQTTSNVIGQITLANFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++  S           +        +++GFLE SN   + EM  +I   + +
Sbjct: 181 PAGLHSMGDNLFSITNASGDAIVGNPDSQGLGKLRQGFLELSNVRLVEEMTDLITAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
            + +  I   +  + + + ++
Sbjct: 241 EANSKSIQTADAML-QTVNSL 260


>gi|15646192|ref|NP_208376.1| flagellar basal body rod protein FlgG [Helicobacter pylori 26695]
 gi|188528376|ref|YP_001911063.1| flagellar basal body rod protein FlgG [Helicobacter pylori Shi470]
 gi|217033804|ref|ZP_03439229.1| hypothetical protein HP9810_877g8 [Helicobacter pylori 98-10]
 gi|308183740|ref|YP_003927867.1| flagellar basal body rod protein FlgG [Helicobacter pylori PeCan4]
 gi|2314768|gb|AAD08623.1| flagellar basal-body rod protein (flgG) [Helicobacter pylori 26695]
 gi|188144616|gb|ACD49033.1| flagellar basal body rod protein FlgG [Helicobacter pylori Shi470]
 gi|216943702|gb|EEC23145.1| hypothetical protein HP9810_877g8 [Helicobacter pylori 98-10]
 gi|261838871|gb|ACX98637.1| flagellar basal-body rod protein [Helicobacter pylori 51]
 gi|297380761|gb|ADI35648.1| flagellar basal-body rod protein FlgG [Helicobacter pylori v225d]
 gi|308062867|gb|ADO04755.1| flagellar basal body rod protein FlgG [Helicobacter pylori Cuz20]
 gi|308064367|gb|ADO06254.1| flagellar basal body rod protein FlgG [Helicobacter pylori Sat464]
 gi|308065925|gb|ADO07817.1| flagellar basal body rod protein FlgG [Helicobacter pylori PeCan4]
 gi|315585990|gb|ADU40371.1| flagellar basal-body rod protein FlgG [Helicobacter pylori 35A]
 gi|317178306|dbj|BAJ56095.1| flagellar basal body rod protein FlgG [Helicobacter pylori F16]
 gi|317179787|dbj|BAJ57575.1| flagellar basal body rod protein FlgG [Helicobacter pylori F30]
 gi|317181286|dbj|BAJ59072.1| flagellar basal body rod protein FlgG [Helicobacter pylori F32]
 gi|317182809|dbj|BAJ60593.1| flagellar basal body rod protein FlgG [Helicobacter pylori F57]
 gi|332674396|gb|AEE71213.1| flagellar basal-body rod protein FlgG [Helicobacter pylori 83]
          Length = 262

 Score =  174 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 45/261 (17%), Positives = 91/261 (34%), Gaps = 21/261 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S     +  LA +  + T ++N++N +T GF+  +  F+++                
Sbjct: 1   MLRSLYSATSGMLAQQTHIDTTSNNIANVNTTGFKKSRADFNDLFYQAMQYAGTNTSNTT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                      V           GS   T   LD A+ G  +F ++ P      TR G F
Sbjct: 61  LSPDGMEVGLGVRPSAITKMFSQGSPKETENNLDVAITGKGFFQVQLPDGTTAYTRSGNF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQKGKVIATMGLYSVDM 165
           K+ + G+LV++ G   +  +            +       +       VI  + L +   
Sbjct: 121 KLDEQGNLVTSEGYLLIPQITLPEDTTQVNIGVDGTVSVTQGLQTTSNVIGQITLANFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++  S           +        +++GFLE SN   + EM  +I   + +
Sbjct: 181 PAGLHSMGDNLFSITNASGEAIVGNPDSQGLGKLRQGFLELSNVRLVEEMTDLITAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
            + +  I   +  + + + ++
Sbjct: 241 EANSKSIQTADAML-QTVNSL 260


>gi|86356306|ref|YP_468198.1| flagellar basal body rod protein FlgF [Rhizobium etli CFN 42]
 gi|86280408|gb|ABC89471.1| flagellar basal-body rod protein [Rhizobium etli CFN 42]
          Length = 244

 Score =  174 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 106/242 (43%), Positives = 163/242 (67%), Gaps = 1/242 (0%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           MQ+   + L++Q+ALE+RL+T+ADNM+N +T GFR  +VKF E+V A KN ++ K++FV+
Sbjct: 1   MQSGLYVSLSSQMALEKRLNTIADNMANVNTTGFRATEVKFDEMVAATKNKLNTKVAFVS 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
            G +YL+++ G    TG  LDFA++GDAWFAL++P G +LTRDGRF + + G LVS  G 
Sbjct: 61  QGNDYLNEQNGELQHTGNMLDFAIKGDAWFALDTPAGRVLTRDGRFTIRETGELVSIRGY 120

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
            PVLD    PIQ+  K     VG  G I Q  + + ++GL+  D+S+G++R ENSGI   
Sbjct: 121 -PVLDAGGAPIQLDTKAGEPAVGSDGIIYQGDRQVGSLGLFEADISKGYLRYENSGIMTT 179

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
             P  + D   V V++G+LE+SN N+M E+ Q+I + + F SI++L+ ++E S  +A++ 
Sbjct: 180 DQPRAVVDRFNVGVEQGYLENSNVNAMREITQLIEVNRAFESISSLMRDSEDSFKQAVQT 239

Query: 241 IA 242
           + 
Sbjct: 240 LG 241


>gi|203288201|ref|YP_002223216.1| flagellar basal-body rod protein [Borrelia recurrentis A1]
 gi|201085421|gb|ACH94995.1| flagellar basal-body rod protein [Borrelia recurrentis A1]
          Length = 265

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 50/263 (19%), Positives = 93/263 (35%), Gaps = 23/263 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +     +   A +  + T+A+N+SN +T+GF+ I+ +F +++   +           
Sbjct: 1   MMRALWTSASGMKAQQYNVDTIANNLSNVNTIGFKKIRAEFEDLIYQTQRRAGTPATEDT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                            +   E G+   T    D A+EGD ++ +    G    TRDG F
Sbjct: 61  VTPLGNQVGHGTKVSATHRLFEQGNLQVTNLNTDVAIEGDGFYKVLLSDGTYGYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG---KVIATMGLYSV 163
           K+  +G LV+  G   + +++     I     I   G       +G     +  + +   
Sbjct: 121 KIDANGHLVTNQGYILLPEISFPEEYIKNSIAISQEGIISVKVNEGLEPIELGQIEIARF 180

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
               G     N+     I                 +K+G LE SN     EM  MI   +
Sbjct: 181 VNPAGLNAIGNNIFKETIGSGEEISGIPGSNGMGKLKQGMLEMSNVAIAEEMVTMIVAQR 240

Query: 219 KFNSITTLIDENEKSMLEAIRNI 241
            +   +  I  ++  +     N+
Sbjct: 241 AYEINSKAIHTSDNMLG-IANNL 262


>gi|304317904|ref|YP_003853049.1| flagellar basal-body rod protein FlgF [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302779406|gb|ADL69965.1| flagellar basal-body rod protein FlgF [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 248

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 51/253 (20%), Positives = 102/253 (40%), Gaps = 18/253 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKND------ 51
           M        +  +A ++ +  +++N++N +T G++   V    F + +            
Sbjct: 1   MLRGLYTASSGMIAQQKIVDVLSNNIANVNTSGYKKDTVTTMAFPDFMVTRSGGDNVPYN 60

Query: 52  --IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109
             I      V       +   G+   T  +LDFA++G  +F + +P GI  TRDG F + 
Sbjct: 61  GYIGNMDYGVLVETFNTNFSEGNIEKTDGKLDFAIDGSGFFTVSTPNGIRYTRDGSFTLN 120

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169
            +G LV+  G Y +         I   +   +V + G IS  G+ +  + +         
Sbjct: 121 SNGYLVTKDGYYVM----GQNGPIQLNNGDISVDDFGNISLNGQTVNKLNIVDFSNYSTL 176

Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
            +  N+              +   VK+G+LE SN N + EM  MI   + + +    +  
Sbjct: 177 RKEGNNLFFTTGG---QAIPASGAVKQGYLEGSNVNPVDEMVTMISAMRTYEANQKTVSA 233

Query: 230 NEKSMLEAIRNIA 242
            ++++ +A+  + 
Sbjct: 234 FDETLDKAVNEVG 246


>gi|15612557|ref|NP_224210.1| flagellar basal body rod protein FlgG [Helicobacter pylori J99]
 gi|4156115|gb|AAD07066.1| FLAGELLAR BASAL-BODY ROD PROTEIN (DISTAL ROD PROTEIN) [Helicobacter
           pylori J99]
 gi|317015022|gb|ADU82458.1| flagellar basal body rod protein FlgG [Helicobacter pylori
           Gambia94/24]
          Length = 262

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 45/261 (17%), Positives = 91/261 (34%), Gaps = 21/261 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S     +  LA +  + T ++N++N +T GF+  +  F+++                
Sbjct: 1   MLRSLYSATSGMLAQQTHIDTTSNNIANVNTTGFKKSRADFNDLFYQAMQYAGTNTSNTT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                      V           GS   T   LD A+ G  +F ++ P      TR G F
Sbjct: 61  LSPDGMEVGLGVRPSAITKMFSQGSPKETENNLDIAITGKGFFQVQLPDGTTAYTRSGNF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQKGKVIATMGLYSVDM 165
           K+ + G+LV++ G   +  +            +       +       VI  + L +   
Sbjct: 121 KLDEQGNLVTSEGYLLIPQITLPEDTTQVNIGVDGTVSVTQGLQTTSNVIGQITLANFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++  S           +        +++GFLE SN   + EM  +I   + +
Sbjct: 181 PAGLHSMGDNLFSITNASGDAIVGNPDSQGLGKLRQGFLELSNVRLVEEMTDLITAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
            + +  I   +  + + + ++
Sbjct: 241 EANSKSIQTADAML-QTVNSL 260


>gi|114706771|ref|ZP_01439671.1| flagellar basal-body rod protein [Fulvimarina pelagi HTCC2506]
 gi|114537719|gb|EAU40843.1| flagellar basal-body rod protein [Fulvimarina pelagi HTCC2506]
          Length = 260

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 47/252 (18%), Positives = 96/252 (38%), Gaps = 21/252 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----------- 50
             +  I      A E  +  +A+N++N +T GF+  + +F++++  ++            
Sbjct: 1   MRALAIAATGMNAQETNVEVIANNIANVNTTGFKRARAEFTDLLYQVERAKGVAAAGAEG 60

Query: 51  ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP-RGIILTRDGRF 106
              +  Q    V           G+   TG +LD AL G+ WF ++ P   I  TRDG F
Sbjct: 61  VVPEGAQLGLGVRLAAIRNVHLQGALKETGNKLDLALNGEGWFQIQGPGGAIRYTRDGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
               +G +V+  G        +VP    +            +  + + +  + L +   +
Sbjct: 121 NTNAEGQIVTLDGYLVD-PELTVPANTSEIVVNEAGQVYARVEGELQDVGQLTLATFANN 179

Query: 167 QGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221
            G      +  S  +                 V +G+LEDSN + + E+ ++I   + + 
Sbjct: 180 AGLHAEGGNLFSETVASGAPVVGVPGDPGYGVVHQGYLEDSNVDPVKEISELISAQRAYE 239

Query: 222 SITTLIDENEKS 233
             + +I   ++ 
Sbjct: 240 MNSKIISAADEM 251


>gi|224437199|ref|ZP_03658180.1| flagellar basal body rod protein FlgG [Helicobacter cinaedi CCUG
           18818]
 gi|313143665|ref|ZP_07805858.1| flagellar basal body rod protein FlgG [Helicobacter cinaedi CCUG
           18818]
 gi|313128696|gb|EFR46313.1| flagellar basal body rod protein FlgG [Helicobacter cinaedi CCUG
           18818]
          Length = 262

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 47/257 (18%), Positives = 96/257 (37%), Gaps = 22/257 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S        L  + ++   ++N++N +T G++  + +F+++   +            
Sbjct: 1   MMRSLYTATTGMLGQQMQIDNTSNNIANVNTTGYKKQRAEFADLFYQVLQYAGTSTSETT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                      V           G    T   LD A+ G+ +F +E P   I  TR G F
Sbjct: 61  ISPTGIEVGIGVRPVAVQKMFSQGHPKETENNLDVAITGNGFFQIELPDGNIAYTRAGSF 120

Query: 107 KVTDDGSLVSASGKY--PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
           K+ ++G++V+A G    P L +     QI    +      +G  ++   V+  + + +  
Sbjct: 121 KLDNNGNVVNAEGYRLIPELTIPEGATQINIGTDGTVSVIEGNQTEVN-VLGQIEIVNFI 179

Query: 165 MSQGFVRRENSGIS-PNIPPTPLED----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G     ++     N    P+           +++GFLE SN   + EM  +I   + 
Sbjct: 180 NPAGLHSLGDNLFINTNASGDPVAGVPGLDGFGQLRQGFLELSNVKLVEEMTDLITGQRA 239

Query: 220 FNSITTLIDENEKSMLE 236
           + + +  I   +  +  
Sbjct: 240 YEANSKSIQTADSMLQT 256


>gi|108563958|ref|YP_628274.1| flagellar basal body rod protein FlgG [Helicobacter pylori HPAG1]
 gi|207092034|ref|ZP_03239821.1| flagellar basal body rod protein FlgG [Helicobacter pylori
           HPKX_438_AG0C1]
 gi|208435465|ref|YP_002267131.1| flagellar basal-body rod protein [Helicobacter pylori G27]
 gi|210135763|ref|YP_002302202.1| flagellar basal body rod protein FlgG [Helicobacter pylori P12]
 gi|217031740|ref|ZP_03437244.1| hypothetical protein HPB128_155g53 [Helicobacter pylori B128]
 gi|254780116|ref|YP_003058223.1| flagellar basal body rod protein FlgG [Helicobacter pylori B38]
 gi|298737122|ref|YP_003729652.1| flagellar basal-body rod protein FlgG [Helicobacter pylori B8]
 gi|107837731|gb|ABF85600.1| flagellar basal-body rod protein [Helicobacter pylori HPAG1]
 gi|208433394|gb|ACI28265.1| flagellar basal-body rod protein [Helicobacter pylori G27]
 gi|210133731|gb|ACJ08722.1| flagellar basal-body rod protein [Helicobacter pylori P12]
 gi|216946587|gb|EEC25187.1| hypothetical protein HPB128_155g53 [Helicobacter pylori B128]
 gi|254002029|emb|CAX30288.1| Flagellar basal-body rod protein flgG (Distal rod protein)
           [Helicobacter pylori B38]
 gi|298356316|emb|CBI67188.1| flagellar basal-body rod protein FlgG [Helicobacter pylori B8]
 gi|307638271|gb|ADN80721.1| Flagellar basal-body rod protein [Helicobacter pylori 908]
 gi|317010275|gb|ADU80855.1| flagellar basal body rod protein FlgG [Helicobacter pylori India7]
 gi|317011821|gb|ADU85568.1| flagellar basal body rod protein FlgG [Helicobacter pylori
           SouthAfrica7]
 gi|325996863|gb|ADZ52268.1| Flagellar basal-body rod protein [Helicobacter pylori 2018]
 gi|325998456|gb|ADZ50664.1| Flagellar basal-body rod protein [Helicobacter pylori 2017]
          Length = 262

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 45/261 (17%), Positives = 91/261 (34%), Gaps = 21/261 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S     +  LA +  + T ++N++N +T GF+  +  F+++                
Sbjct: 1   MLRSLYSATSGMLAQQTHIDTTSNNIANVNTTGFKKSRADFNDLFYQAMQYAGTNTSNTT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                      V           GS   T   LD A+ G  +F ++ P      TR G F
Sbjct: 61  LSPDGMEVGLGVRPSAITKMFSQGSPKETENNLDVAITGKGFFQVQLPDGTTAYTRSGNF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQKGKVIATMGLYSVDM 165
           K+ + G+LV++ G   +  +            +       +       VI  + L +   
Sbjct: 121 KLDEQGNLVTSEGYLLIPQITLPEDTTQVNIGVDGTVSVTQGLQTTSNVIGQITLANFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++  S           +        +++GFLE SN   + EM  +I   + +
Sbjct: 181 PAGLHSMGDNLFSITNASGDAIVGNPDSQGLGKLRQGFLELSNVRLVEEMTDLITAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
            + +  I   +  + + + ++
Sbjct: 241 EANSKSIQTADAML-QTVNSL 260


>gi|238782794|ref|ZP_04626823.1| Flagellar basal-body rod protein flgG [Yersinia bercovieri ATCC
           43970]
 gi|238716217|gb|EEQ08200.1| Flagellar basal-body rod protein flgG [Yersinia bercovieri ATCC
           43970]
          Length = 260

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 41/259 (15%), Positives = 89/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A +  +  +++N++N  T GF+  +  F +++               
Sbjct: 1   MIRSLWIAKTGLEAQQTNMDVISNNLANVSTNGFKRQRAVFEDLLYQTLRQPGAQSTEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRF 106
                 Q  + V           GS   T    D A++G+ +F ++ +      TRDG F
Sbjct: 61  TIPSGLQLGTGVRPVSTERLHSQGSLNQTSNSKDLAIQGNGFFQIQLADGTTAFTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLD-MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           ++  +G LV++SG             +         V    +     + +  + L +   
Sbjct: 121 QIDQNGQLVTSSGYPVQPAITLPPDAETLTVGNDGIVSVTVQGQTAPQQVGQITLSTFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +            +         T+++G++E SN N   E+  MI   + +
Sbjct: 181 DSGLESIGENLYRETQSSGAPNETTPGLNGSGTLRQGYVETSNVNVAEELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ +    +
Sbjct: 241 EINSKAVSTSDQMLQRLTQ 259


>gi|303239789|ref|ZP_07326313.1| fagellar hook-basal body protein [Acetivibrio cellulolyticus CD2]
 gi|302592726|gb|EFL62450.1| fagellar hook-basal body protein [Acetivibrio cellulolyticus CD2]
          Length = 265

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 55/258 (21%), Positives = 106/258 (41%), Gaps = 23/258 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +     +   A +  +  +++N+SN +T  ++  +V+F +++    N          
Sbjct: 1   MMRALWTAGSGMTAQQLSVDVISNNLSNVNTTAYKKERVEFKDMLYETLNRASVMDGDGK 60

Query: 54  ----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV- 108
               Q     +      S  +G+   T   LDFA++GD +F +  P+G   TRDG FK+ 
Sbjct: 61  PVNLQVGHGSSIVATSKSFGIGNLEKTDNPLDFAIDGDGFFTVSGPKGTAYTRDGNFKIS 120

Query: 109 -TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG------KVIATMGLY 161
            ++DG+ ++ S  YPVLD     I I        V + GE+S          +   +G+ 
Sbjct: 121 VSEDGNKLTTSDGYPVLDDTGAEINIDVDVSKLIVSDFGELSYTDDTGVVVPLGQKIGIV 180

Query: 162 SVDMSQGFVRRENSGISPNIPP----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217
                QG     ++  + N          E  +   VK+ ++E SN   + EM ++I   
Sbjct: 181 KFSNRQGLESMGSNLYASNSASGEAVQDAEMGTVSNVKQYYIESSNVQVVEEMVKLIVAQ 240

Query: 218 QKFNSITTLIDENEKSML 235
           + +   +  +   +  + 
Sbjct: 241 RAYEINSKAVQTADDMLG 258


>gi|187918628|ref|YP_001884193.1| flagellar basal-body rod protein FlgF [Borrelia hermsii DAH]
 gi|119861476|gb|AAX17271.1| flagellar basal-body rod protein FlgF [Borrelia hermsii DAH]
          Length = 282

 Score =  173 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 50/280 (17%), Positives = 104/280 (37%), Gaps = 38/280 (13%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKND------ 51
           M        +  +A   RL  +++N++N D  G++        F E++    ND      
Sbjct: 1   MVRGIYTAASGMMAQRHRLDVISNNLANIDLAGYKKDLSVHKAFPEMLIRRLNDDGLYKL 60

Query: 52  ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101
                     + +  + V   + Y S E G    TG  LD AL  + +F +++P G   T
Sbjct: 61  PKGYLETAPVVGKLGTGVEENEIYTSFEQGPLKITGNPLDLALTDEGFFVVQTPEGERYT 120

Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV------- 154
           R+G F +  +G LV+  G   + +   + ++                + +          
Sbjct: 121 RNGSFTLGPEGMLVTKDGYPVIGEKGHIYLKDNNFKITDQGQIFHNTTFEENPKRLVSEY 180

Query: 155 ---------IATMGLYSVDMSQGFVRRENSGISPNI---PPTPLEDLSGVTVKRGFLEDS 202
                    +  + + + + ++   ++ +S  +          +E  S   ++ G LE S
Sbjct: 181 ENSWENYELLDNLKIVNFEKTRFLKKQGSSLWNRTEISGQAKNIEINSRPKIETGALEGS 240

Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           N N++ EM  MI + + + +    I   +  + + I  I 
Sbjct: 241 NVNAINEMVSMITVNRAYEANQKTIQTEDSLLGKLINEIG 280


>gi|13472570|ref|NP_104137.1| flagellar basal body rod protein FlgF [Mesorhizobium loti
           MAFF303099]
 gi|17366619|sp|Q98HE3|FLGF_RHILO RecName: Full=Flagellar basal-body rod protein flgF
 gi|14023316|dbj|BAB49923.1| flagellar basal-body rod protein; FlgF [Mesorhizobium loti
           MAFF303099]
          Length = 241

 Score =  173 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 101/243 (41%), Positives = 152/243 (62%), Gaps = 4/243 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           MQ S  + L+AQ+ALE+RL T+ADN++N +TVGFR   VKF ++V        + +SF +
Sbjct: 1   MQDSLYVALSAQMALERRLDTIADNVANANTVGFRATGVKFEDMVS---GTGQKSVSFAS 57

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           SGK YLS   GS   TG   DFA++GDAWFA+++P G ++TRDGRF + ++G L+S  G 
Sbjct: 58  SGKTYLSGAHGSLSETGNPFDFAIQGDAWFAIDTPAGTVMTRDGRFSMNENGELMSIEG- 116

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
           +PVLD    PIQ+  ++     G  G + Q  +++ ++GLY+ D  + FVR  NSGI P 
Sbjct: 117 HPVLDAGGAPIQLDPRNGPPKAGADGSLRQNDQLVGSIGLYNFDPGENFVRYGNSGIVPA 176

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
             P P+ D S V + +GF+E+SN N + EM ++I + + F +   L+ +   S  EAI+ 
Sbjct: 177 RTPEPVTDRSDVGIAQGFVEESNVNPVLEMTRLIMVQRAFENTAALMRQTASSSDEAIKT 236

Query: 241 IAS 243
           + S
Sbjct: 237 LGS 239


>gi|149927800|ref|ZP_01916051.1| flagellar basal body rod protein FlgG [Limnobacter sp. MED105]
 gi|149823422|gb|EDM82653.1| flagellar basal body rod protein FlgG [Limnobacter sp. MED105]
          Length = 260

 Score =  173 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 48/259 (18%), Positives = 96/259 (37%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A + +L  +++N++NT T GF+  +  F +++               
Sbjct: 1   MMRSLWIAKTGLDAQQTQLDVISNNLANTATNGFKRSRAVFEDLLYQTLRQPGAQTTEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                 Q  + V       +   G+   TG  LD A+ G  +F ++ P G    TRDG  
Sbjct: 61  QVPSGLQIGTGVKPVSTVRNFAQGNLQQTGNTLDVAINGQGFFQVQMPDGTTSYTRDGSI 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           ++  +G+LV+++G   +  +            +   V    +   + + +  + L S   
Sbjct: 121 QIDANGTLVTSNGYPVLGPVTIPQGVQEISISQDGVVSAVVQGQVQPQELGQIQLASFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +  S              T     V +GF+E SN N + E+  +I   + +
Sbjct: 181 PAGLFSMGQNLYSETAASGAPTQAVAGTNGVGFVSQGFVETSNVNVVEELVGLIQAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  I  +++ +    +
Sbjct: 241 EINSKAISTSDQMLQRLSQ 259


>gi|190890357|ref|YP_001976899.1| flagellar basal-body rod protein [Rhizobium etli CIAT 652]
 gi|190695636|gb|ACE89721.1| flagellar basal-body rod protein [Rhizobium etli CIAT 652]
          Length = 244

 Score =  173 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 106/242 (43%), Positives = 164/242 (67%), Gaps = 1/242 (0%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           MQ+   + L++Q+ALE+RL+T+ADNM+N +T GFR  +VKF E+V A KN ++ K++FV+
Sbjct: 1   MQSGLYVSLSSQMALEKRLNTIADNMANVNTTGFRATEVKFDEMVAATKNKLNTKVAFVS 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
            G +YL+++ G    TG  LDFA++GDAWF+L++P G +LTRDGRF + + G LVS  G 
Sbjct: 61  QGNDYLNEQNGELQHTGNMLDFAVKGDAWFSLDTPAGRVLTRDGRFTLKETGELVSIRGY 120

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
            P+LD    PIQ+  K     VG  G I Q G+ + ++GL+  D+S+G++R ENSGI   
Sbjct: 121 -PILDAGGAPIQLDTKAGEPAVGTDGIIYQAGRQVGSLGLFEADISKGYLRYENSGIMTT 179

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
             P  + D   V V++G+LE+SN N+M E+ Q+I + + F SI++L+ ++E S  EA++ 
Sbjct: 180 DQPRAVVDRFNVGVEQGYLENSNVNAMREITQLIEVNRSFESISSLMRDSEDSFKEAVQT 239

Query: 241 IA 242
           + 
Sbjct: 240 LG 241


>gi|116250476|ref|YP_766314.1| flagellar basal body rod protein FlgF [Rhizobium leguminosarum bv.
           viciae 3841]
 gi|115255124|emb|CAK06198.1| putative flagella associated protein [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 244

 Score =  173 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 107/242 (44%), Positives = 162/242 (66%), Gaps = 1/242 (0%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           MQ+   + L++Q+ALE+RL+T+ADNM+N +T GFR  +VKF E+V A +N ++ K++FV+
Sbjct: 1   MQSGLYVSLSSQMALEKRLTTIADNMANVNTTGFRATEVKFDEMVAATRNKLNTKVAFVS 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
            G +YL++  G    TG  LDFA++GDAWFAL++P G +LTRDGRF + D G LVS  G 
Sbjct: 61  QGNDYLNEGNGELQHTGNMLDFAIKGDAWFALDTPAGQVLTRDGRFTIKDTGELVSIRGY 120

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
            PVLD    PIQ+        VG  G I Q G+ I ++GL+  D+S+G++R ENSGI   
Sbjct: 121 -PVLDAGGAPIQLNTTGGEPAVGTDGIIYQGGRQIGSLGLFEADVSKGYLRYENSGIMTT 179

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
             P  + D   V V++G+LE+SN N+M E+ Q+I + + F S+++L+ ++E S  EA++ 
Sbjct: 180 EQPRAVVDRFNVGVEQGYLENSNVNAMREITQLIEVNRAFESVSSLMRDSEDSFKEAVQT 239

Query: 241 IA 242
           + 
Sbjct: 240 LG 241


>gi|241203100|ref|YP_002974196.1| flagellar basal body rod protein FlgF [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240856990|gb|ACS54657.1| flagellar basal-body rod protein FlgF [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 244

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 108/242 (44%), Positives = 163/242 (67%), Gaps = 1/242 (0%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           MQ+   + L++Q+ALE+RL+T+ADNM+N +T GFR  +VKF E+V A KN ++ K++FV+
Sbjct: 1   MQSGLYVSLSSQMALEKRLNTIADNMANVNTTGFRATEVKFDEMVAATKNKLNTKVAFVS 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
            G +YL++  G    TG  LDFA++GDAWFAL++P G +LTRDGRF + D G LVS  G 
Sbjct: 61  QGNDYLNEGNGELQHTGNMLDFAIKGDAWFALDTPAGRVLTRDGRFTIKDTGELVSIRGY 120

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
            PVLD    PIQ+  K     VG  G I Q  + +A++GL+  D+S+G++R ENSGI   
Sbjct: 121 -PVLDAGGAPIQLNTKGGEPAVGTDGIIYQADRQVASLGLFEADISKGYLRYENSGIMTT 179

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
             P  + D   V V++G+LE+SN N+M E+ Q+I + + F S+++L+ ++E S  EA++ 
Sbjct: 180 DQPRAVVDRFNVGVEQGYLENSNVNAMREITQLIEVNRAFESVSSLMRDSEDSFKEAVQT 239

Query: 241 IA 242
           + 
Sbjct: 240 LG 241


>gi|327193031|gb|EGE59943.1| flagellar basal-body rod protein [Rhizobium etli CNPAF512]
          Length = 244

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 107/242 (44%), Positives = 164/242 (67%), Gaps = 1/242 (0%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           MQ+   + L++Q+ALE+RL+T+ADNM+N +T GFR  +VKF E+V A KN ++ K++FV+
Sbjct: 1   MQSGLYVSLSSQMALEKRLNTIADNMANVNTTGFRATEVKFDEMVAATKNKLNTKVAFVS 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
            G +YL+++ G    TG  LDFA++GDAWF+L++P G +LTRDGRF + + G LVS  G 
Sbjct: 61  QGNDYLNEQNGELQHTGNMLDFAVKGDAWFSLDTPAGRVLTRDGRFTLKETGELVSIRGY 120

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
            PVLD    PIQ+  K     VG  G I Q G+ + ++GL+  D+S+G++R ENSGI   
Sbjct: 121 -PVLDAGGAPIQLDTKAGEPAVGTDGIIYQAGRQVGSLGLFEADISKGYLRYENSGIMTT 179

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
             P  + D   V V++G+LE+SN N+M E+ Q+I + + F SI++L+ ++E S  EA++ 
Sbjct: 180 DQPRAVVDRFNVGVEQGYLENSNVNAMREITQLIEVNRSFESISSLMRDSEDSFKEAVQT 239

Query: 241 IA 242
           + 
Sbjct: 240 LG 241


>gi|319781687|ref|YP_004141163.1| flagellar basal-body rod protein FlgF [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317167575|gb|ADV11113.1| flagellar basal-body rod protein FlgF [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 240

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 98/243 (40%), Positives = 150/243 (61%), Gaps = 4/243 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M+ S  + L++Q+ALE+RL T+ADN++N  T+GFR   VKF +VV        + +SF +
Sbjct: 1   MRDSLYVALSSQIALERRLDTIADNVANASTIGFRATGVKFEDVVS---GTGQKSVSFAS 57

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
            GK YLS   G+   TG   DFA++GDAWFA+E+P G ++TRDGRF + ++G L+S  G 
Sbjct: 58  PGKTYLSGAHGALSETGNPFDFAIQGDAWFAIETPVGTVMTRDGRFSMNENGELMSIEG- 116

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
           +PVLD    PIQ+  ++     G  G + Q  +++ ++GLY+ D    FVR  NSGI P 
Sbjct: 117 HPVLDAGGSPIQLDPRNGPPKAGADGSLRQNDQLVGSIGLYNFDPGANFVRYGNSGIVPA 176

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
             P P+ D S + V +GFLE+SN N + E+ ++I + + F +   L+ + + S  EAI+ 
Sbjct: 177 RTPEPVTDRSDIGVAQGFLEESNVNPVLEITRLIMVQRAFENTAALMRQTDSSTDEAIKT 236

Query: 241 IAS 243
           + S
Sbjct: 237 LGS 239


>gi|153011524|ref|YP_001372738.1| flagellar basal body rod protein FlgG [Ochrobactrum anthropi ATCC
           49188]
 gi|151563412|gb|ABS16909.1| flagellar basal-body rod protein FlgG [Ochrobactrum anthropi ATCC
           49188]
          Length = 262

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 47/262 (17%), Positives = 89/262 (33%), Gaps = 21/262 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55
             +  I      A +  L  +A+N++N +T GF+  + +FS+++   +            
Sbjct: 1   MKALTIAATGMNAQQLNLEVIANNIANINTTGFKRARAEFSDLLYQSERTAGVPNQANQS 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                      V +         GSF  TG   D AL G  WF ++SP    +  R G F
Sbjct: 61  IVPEGALVGLGVQTAAVRNLHMQGSFNQTGNPFDLALTGKGWFQIQSPTGETLYARAGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE-KGEISQKGKVIATMGLYSVDM 165
               DG LV+  G      +   P  +            K +       +  + L +   
Sbjct: 121 NKNADGQLVTLDGNPVEPAITIPPDAVEVTVTDTGQVFAKLQDQVNQVDLGQLTLANFTN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +                      ++K+G+LE SN + + E+  +I   + +
Sbjct: 181 EAGLEPLGGNLYRETEASGGPLVGVPGDPGYGSIKQGYLEASNVDPVKEITDLITAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNIA 242
              + +I   ++      +N+ 
Sbjct: 241 EMNSKVIQAADEMAATVSKNLR 262


>gi|330826757|ref|YP_004390060.1| flagellar basal-body rod protein FlgG [Alicycliphilus denitrificans
           K601]
 gi|329312129|gb|AEB86544.1| flagellar basal-body rod protein FlgG [Alicycliphilus denitrificans
           K601]
          Length = 260

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 48/259 (18%), Positives = 97/259 (37%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S  I      A + +L  ++ N++N  T GF+     F +++      +  +     
Sbjct: 1   MINSLWIAKTGMSAQQTQLDVISHNLANVSTTGFKRNSAVFEDLIYQNLRQVGAQTTEEN 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                      V +     +   GS   +   LD A+ G+ +F ++ P G I  TRDG F
Sbjct: 61  QLPTGLHLGLGVRTVATSRNFTQGSLQQSSNSLDVAINGNGFFEVQLPDGTIGYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           ++   G +V++ G      +            E   V      + + + +  + + S   
Sbjct: 121 QLDAQGRMVTSGGLPVANGITVPQGATSISISETGVVSATIAGNAQPQQLGQLAMSSFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
           + G      +    +    P +     T     +K+GFLE SN N + E+  MI   + +
Sbjct: 181 AAGLQPVGQNMYKESAASGPPQQGQPGTNGLGVIKQGFLETSNVNVVEELVTMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  I  +++ + +  +
Sbjct: 241 EMNSKAIQTSDQMLAKLSQ 259


>gi|311694363|gb|ADP97236.1| flagellar basal-body rod protein FlgG [marine bacterium HP15]
          Length = 262

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 47/262 (17%), Positives = 96/262 (36%), Gaps = 20/262 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  +      A +  +ST+++N++N +T GF+  +  F +++  I            
Sbjct: 1   MHPALWVSKTGLSAQDTNMSTISNNLANVNTTGFKRDRAVFQDLLYQINRQPGGLTTQNS 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+   T   LD A+ G  +  ++ P   I  TRDG+F
Sbjct: 61  ELPSGLQLGTGVRVVGTAKQFSQGNLQITEQPLDMAINGRGFLQVQLPDGQIAYTRDGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           ++  DG +V+  G      +            +   V    +       +  + L     
Sbjct: 121 QLNADGDVVNPDGYPLEPAINVPENATNITIGKDGTVTAVTDDQAAPVNLGQITLVDFIN 180

Query: 166 SQGFVRRENSGI-SPNIPPTPLED----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
            QG     N+   + N    P E         ++++G +E SN   + E+  MI   + +
Sbjct: 181 PQGLQAIGNNLFKATNASGDPAEGEPGLAGLGSIEQGSVESSNVEVVEELVNMITTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNIA 242
              + ++   ++ +    +NI 
Sbjct: 241 EMNSKVVSTTDQMLQFITQNIG 262


>gi|71906393|ref|YP_283980.1| flagellar basal body rod protein FlgG [Dechloromonas aromatica RCB]
 gi|71846014|gb|AAZ45510.1| Protein of unknown function DUF1078 [Dechloromonas aromatica RCB]
          Length = 260

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 90/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A + +L  +++N++N  T GF+  +  F +++               
Sbjct: 1   MIRSLWIARTGLDAQQTQLDVISNNLANVSTNGFKRSRAVFEDLLYQTLRQPGAQSSQQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                 Q  + V           G+   T   LD A++G+ +F +  P G    TRDG F
Sbjct: 61  QIPTGLQLGTGVRPVSTAHIFTQGNLQKTDNTLDIAVQGNGFFQILLPDGTTGYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           +  + G +V++ G     ++      +         V      S     I ++ L +   
Sbjct: 121 QKDNQGQIVTSDGYPLQPNITIPSNALSVSVGTDGTVSVTQSGSAATTQIGSIQLATFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +              +  +     V +G++E SN N   E+  MI   + +
Sbjct: 181 PAGLQSAGQNLFLETAASGTPTPNTPGSNGAGIVNQGYVETSNVNVAEELVTMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              + ++  ++  +    +
Sbjct: 241 ELNSKVVSTSDAMLGRLTQ 259


>gi|261840277|gb|ACY00043.1| flagellar basal body rod protein FlgG [Helicobacter pylori 52]
          Length = 262

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 45/261 (17%), Positives = 91/261 (34%), Gaps = 21/261 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S     +  LA +  + T ++N++N +T GF+  +  F+++                
Sbjct: 1   MLRSLYSATSGMLAQQTHIDTTSNNIANVNTTGFKKSRTDFNDLFYQAMQYAGTNTSNTT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                      V           GS   T   LD A+ G  +F ++ P      TR G F
Sbjct: 61  LSPDGMEVGLGVRPSAITKMFSQGSPKETENNLDVAITGKGFFQVQLPDGTTAYTRSGNF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQKGKVIATMGLYSVDM 165
           K+ + G+LV++ G   +  +            +       +       VI  + L +   
Sbjct: 121 KLDEQGNLVTSEGYLLIPQITLPEDTTQVNIGVDGTVSVTQGLQTTSNVIGQITLANFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++  S           +        +++GFLE SN   + EM  +I   + +
Sbjct: 181 PAGLHSMGDNLFSITNASGEAIVGNPDSQGLGKLRQGFLELSNVRLVEEMTDLITAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
            + +  I   +  + + + ++
Sbjct: 241 EANSKSIQTADAML-QTVNSL 260


>gi|315453484|ref|YP_004073754.1| flagellar basal-body rod protein [Helicobacter felis ATCC 49179]
 gi|315132536|emb|CBY83164.1| flagellar basal-body rod protein [Helicobacter felis ATCC 49179]
          Length = 262

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 45/261 (17%), Positives = 92/261 (35%), Gaps = 21/261 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S        L  +  + T ++N++N +TVGF+  +  F+++                
Sbjct: 1   MLRSLYSATTGMLGQQTHIDTTSNNIANVNTVGFKKQRADFNDLFYQALQYAGTSTSDTT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                      V +         GS   T   LD A+ G  +F ++ P      TR G F
Sbjct: 61  KSPNGIEVGLGVRTSSVTKMFSQGSPKETENNLDIAITGKGFFQIQMPDGSTAYTRAGNF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGE-ISQKGKVIATMGLYSVDM 165
           K+ D G++V+  G   +  +            +       +  +    VI  + L +   
Sbjct: 121 KIDDQGNMVTTEGYLLIPQITFPQDTTQISIGVDGTVSVTQGNASTSNVIGQITLANFIN 180

Query: 166 SQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++ ++      P             +++GFLE SN   + EM  +I   + +
Sbjct: 181 PAGLHALGDNLLAVTSASGPAIVGNPNGDGYGQLRQGFLELSNVRLVEEMTDLITAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
            + +  I   +  + + + ++
Sbjct: 241 EANSKTIQTADNML-QTVNSL 260


>gi|157738176|ref|YP_001490860.1| flagellar distal rod protein FlgG [Arcobacter butzleri RM4018]
 gi|157700030|gb|ABV68190.1| flagellar distal rod protein FlgG [Arcobacter butzleri RM4018]
          Length = 262

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 41/261 (15%), Positives = 90/261 (34%), Gaps = 21/261 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M            A++ ++   ++N++N +T GF+  + +F +++    N          
Sbjct: 1   MIRGLYTAATGMNAMQHQIDVTSNNIANVNTTGFKKDRAEFQDLMYESLNYTAGRTTQTT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                      V           G   STG  LD A+ G  +F +  P      +R+G F
Sbjct: 61  LNPTGIDVGLGVRISNIQKEFTEGDLKSTGNPLDIAIAGKGFFQITLPSGETAYSRNGNF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFN-VGEKGEISQKGKVIATMGLYSVDM 165
           K+ ++G++V+ +G     ++                V  K   +     +  + L     
Sbjct: 121 KLNEEGTIVNGNGYPLQPEIVVPNNVKDISVGTDGLVTAKDPQTGDTIELGQITLADFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     +S    +     + +         ++K+  LE SN   + EM  +I   + +
Sbjct: 181 PAGLTPLGDSLFMQSEASGDVIEGDPTTEQFGSLKQSMLESSNVKLVNEMVDLITAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
            + +  I   +  +   +  +
Sbjct: 241 EANSKAITTADNMLD-IVNRL 260


>gi|332284021|ref|YP_004415932.1| flagellar basal body rod protein FlgG [Pusillimonas sp. T7-7]
 gi|330427974|gb|AEC19308.1| flagellar basal body rod protein FlgG [Pusillimonas sp. T7-7]
          Length = 261

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 43/260 (16%), Positives = 88/260 (33%), Gaps = 21/260 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      + +  +  +++N++N +T GF+  +  F +++               
Sbjct: 1   MIRSLWIAKTGLESQQTNMDVISNNLANVNTTGFKRSRANFEDLMYQTIRQPGAQVGAAN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V +         G+   TG  +D A++G  +  +E P G    TRDG  
Sbjct: 61  QLPSGLQIGTGVRTVATERIHTQGNLKDTGNSMDIAIQGKGFLQVEMPDGTFAYTRDGSL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPI--QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
           +V  +G LV+A G      +        I    +      +   +     +  + L +  
Sbjct: 121 QVDQNGQLVTAGGYPIQPPINIPDNALTITIARDGMVSVTQPGATGANVEVGQLQLNTFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +         P             V + + E SN N   E+  MI   + 
Sbjct: 181 NPTGLQSAGENLYVETDASGPANFAQPGLDGAGLVLQQYTETSNVNVAEELVNMITTQRA 240

Query: 220 FNSITTLIDENEKSMLEAIR 239
           +   +  I+ +++ +    +
Sbjct: 241 YEMNSKAIETSDQMLARLTQ 260


>gi|219685599|ref|ZP_03540415.1| flagellar hook-basal body complex protein [Borrelia garinii Far04]
 gi|219672877|gb|EED29900.1| flagellar hook-basal body complex protein [Borrelia garinii Far04]
          Length = 282

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 50/280 (17%), Positives = 102/280 (36%), Gaps = 38/280 (13%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51
           M        +  +A   +L  V++N++N D VG++        F E++    ND      
Sbjct: 1   MVRGIYTAASGMMAERHKLDVVSNNLANIDLVGYKKDLSIQKAFPEMLIRRLNDDGLYKF 60

Query: 52  ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101
                     + +  + V   + Y   E G   +T   LD AL    +F +++  G   T
Sbjct: 61  PKGHLETAPIVGKLGTGVEENEIYTLFEQGPLKTTSNPLDLALTDQGFFVIQTSYGERYT 120

Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV------- 154
           R+G F +  +G LV+ SG   + +   + ++                S +          
Sbjct: 121 RNGSFTIGKEGILVTKSGFPVLGEKGYIYLKKNNFKITPQGQIFHNSSFESNPKRLVSEH 180

Query: 155 ---------IATMGLYSVDMSQGFVRRENSGIS---PNIPPTPLEDLSGVTVKRGFLEDS 202
                    + T+ + + +  +   ++ NS       +     ++      ++ G LE S
Sbjct: 181 ENSWKNYELLDTIRIVNFENPRFLKKQGNSLWVDTKTSGKAQEIDISLRPKIETGALEAS 240

Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           N N++ EM  MI + + + +    I   +  + + I  I 
Sbjct: 241 NVNAVKEMVLMIEINRAYEANQKTIQTEDSLLGKLINEIG 280


>gi|34558104|ref|NP_907919.1| flagellar basal body rod protein FlgG [Wolinella succinogenes DSM
           1740]
 gi|34483822|emb|CAE10819.1| FLAGELLAR BASAL-BODY ROD PROTEIN DISTAL ROD PROTEIN [Wolinella
           succinogenes]
          Length = 263

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 41/261 (15%), Positives = 100/261 (38%), Gaps = 21/261 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +        +  + ++   ++N++N +T+G++  + +F+++   +            
Sbjct: 1   MMRALYTATTGMMGQQLQIDVTSNNIANVNTIGYKKQRAEFADLFYQVMEYAGSSTSETT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                      V           G+F  TG  LD A+ G+ +F ++ P      TR+G F
Sbjct: 61  LSPTGIEVGLGVRPTAITKIFSQGNFKETGNNLDIAITGNGFFQIQLPDGTTAYTRNGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           K  D+G++V++ G   + ++            +   V        +   I  + + +   
Sbjct: 121 KPDDEGNIVNSDGYRLIPEITIPEDATQINIGVDGTVSVLQGNQTEVNTIGQIEIATFIN 180

Query: 166 SQGFVRRENSGI-SPNIPPTPLED----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++   + N    P+ D         +++GF+E SN   + EM  +I   + +
Sbjct: 181 PAGLHSLGDNLYLNTNASGDPIVDTPGLNGFGQLRQGFVELSNVKLVEEMTDLITGQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
            + +  I   +  + + + ++
Sbjct: 241 EANSKSIQTADSML-QTVNSL 260


>gi|51599025|ref|YP_073213.1| flagellar basal body rod protein FlgG [Borrelia garinii PBi]
 gi|51573596|gb|AAU07621.1| flagellar basal-body rod protein [Borrelia garinii PBi]
          Length = 265

 Score =  173 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 48/263 (18%), Positives = 92/263 (34%), Gaps = 23/263 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +     +   A +  + T+A+N+SN +T GF+ I+ +F +++   +N          
Sbjct: 1   MMRALWTAASGMTAQQYNVDTIANNLSNVNTTGFKKIRAEFEDLIYQTQNRAGTPATENT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                                E G   ST    D A+EGD ++ +  P G    TRDG F
Sbjct: 61  LRPLGNQVGHGTKIAATQRIFEQGKMQSTNLLTDVAIEGDGFYKILLPDGSYAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNV---GEKGEISQKGKVIATMGLYSV 163
           K+  +  LV++ G   + ++      I     I        K + S +   +  + +   
Sbjct: 121 KIDSNRELVTSQGYKVLPNIFFPEEYIQNSITISEQGIVSVKIDNSNEPIELGQIEISRF 180

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
               G     ++                       +++  LE SN +   EM  MI   +
Sbjct: 181 VNPAGLSAIGSNLFKETAGSGQEIAGIPGSEGMGILRQSILEMSNVSIAEEMVTMIVAQR 240

Query: 219 KFNSITTLIDENEKSMLEAIRNI 241
            +   +  I  ++  +     N+
Sbjct: 241 AYEINSKAIQTSDNMLG-IANNL 262


>gi|257457573|ref|ZP_05622740.1| flagellar basal-body rod protein FlgG [Treponema vincentii ATCC
           35580]
 gi|257444959|gb|EEV20035.1| flagellar basal-body rod protein FlgG [Treponema vincentii ATCC
           35580]
          Length = 271

 Score =  173 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 53/268 (19%), Positives = 98/268 (36%), Gaps = 26/268 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51
           M   +    +   A +++L  +A N++N DT  ++        F E++    ND      
Sbjct: 1   MIRGWYTAASGMNAQQKQLDVIAQNLANADTTSYKRDVATHKNFPELLIRRLNDDGVVKN 60

Query: 52  ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101
                     I +    V   + +   E GS   T T  D ALEG  +F +E+P G   T
Sbjct: 61  PFGSSDVAPIIGKLGLGVELNEIFTEFEQGSLKQTNTASDLALEGKGFFCVETPYGERYT 120

Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMA----SVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157
           R+G F V  +G L++  G   + +              ++         E      +   
Sbjct: 121 RNGNFTVGVEGYLMTKEGYPVLGENGRIFLQDQEYKVNQNGEVYARPMTEPDSDSTLADR 180

Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPL---EDLSGVTVKRGFLEDSNANSMYEMGQMI 214
           + + + +  +   +  +S         P    E      V +GF+E SN   + EM +MI
Sbjct: 181 LKIVTFENDRYLKKHGSSFYLDTPVSGPAIAAEGGDRPVVVQGFVEASNIKVVNEMVRMI 240

Query: 215 HLTQKFNSITTLIDENEKSMLEAIRNIA 242
            + + + +    I   +  M +    +A
Sbjct: 241 EVNRAYEANQKTIQSEDTMMSKLWNEVA 268


>gi|258404727|ref|YP_003197469.1| flagellar basal-body rod protein FlgG [Desulfohalobium retbaense
           DSM 5692]
 gi|257796954|gb|ACV67891.1| flagellar basal-body rod protein FlgG [Desulfohalobium retbaense
           DSM 5692]
          Length = 262

 Score =  173 bits (437), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 51/263 (19%), Positives = 97/263 (36%), Gaps = 22/263 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M T+ +       A +  +  +A+N++N +T GF+  +V F +++     ++        
Sbjct: 1   MTTALSTAATGMEAQQTIVDVIANNLANVNTTGFKKSRVDFQDLLYQDARNVGSAVTQEN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q    V +   Y    +G    TG ELD A+EGD +F +  P      TR G  
Sbjct: 61  DVPTGTQIGHGVRTAAVYKINTIGDINRTGNELDLAIEGDGFFQVTLPDGETAYTRAGAL 120

Query: 107 KVTDDGSLVSASGKY--PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
           K   DG +V++ G    P + +      +    +          +     + T+ L    
Sbjct: 121 KKDGDGRVVTSDGYPLEPEIVIPENATDVVIGKDGTVQAYLEGEAATPSDLGTIELARFS 180

Query: 165 MSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G     N+                 +     + + FLEDSN ++M EM  MI   + 
Sbjct: 181 NPAGLKNIGNNLHLETQSSGAPIVDLPGEDGLGALAQNFLEDSNVSTMQEMVNMISAQRA 240

Query: 220 FNSITTLIDENEKSMLEAIRNIA 242
           +   +  +   ++ + +    +A
Sbjct: 241 YEINSKAVKTADEML-QMTNQLA 262


>gi|118581848|ref|YP_903098.1| flagellar basal body rod protein [Pelobacter propionicus DSM 2379]
 gi|118504558|gb|ABL01041.1| flagellar basal body rod protein [Pelobacter propionicus DSM 2379]
          Length = 245

 Score =  173 bits (437), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 61/248 (24%), Positives = 116/248 (46%), Gaps = 11/248 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN-----DIDQK 55
           M +     L+  +A  +R+ T+++N++N +T GF+  K+ F  ++    N          
Sbjct: 1   MNSGMYAALSGSIAAMKRMDTISNNLANVNTPGFKKDKMLFESMLAGTSNPPAVPQSSTA 60

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115
              +     Y+   VGS   TG  LDFA++GD +F +++P+G   TR G F+++ DG+LV
Sbjct: 61  DPIMQKESVYIDYGVGSASQTGNPLDFAIDGDGFFVIQTPQGRAYTRQGNFRLSVDGTLV 120

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM-GLYSVDMSQGFVRREN 174
           +A G      +      I  +    +V  +GE++  G    TM  +          +  +
Sbjct: 121 TADG----FPVLGQDDVIRIQGGQVDVNSRGEVTVDGTPTGTMISIVDFPKPYNLTK-VS 175

Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
           S       P      +  ++++G LE SN +++ EM QMI  T+ F++   +I   +  +
Sbjct: 176 SAQFVPANPQATPQAATGSIRQGQLEGSNVDTITEMVQMIETTRYFDACQRVIKGFDDMV 235

Query: 235 LEAIRNIA 242
            +A  ++ 
Sbjct: 236 GKAANDLG 243


>gi|308273544|emb|CBX30146.1| Flagellar basal-body rod protein flgG [uncultured Desulfobacterium
           sp.]
          Length = 260

 Score =  173 bits (437), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 47/257 (18%), Positives = 91/257 (35%), Gaps = 18/257 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M        +   A +  +  +++N++N +TVGF+  +  F +++    +          
Sbjct: 1   MLRGMWSAASGMDAQKMMIDVISNNLANVNTVGFKKSRPDFQDLMYQTMSQGGSTTTSGD 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107
                 Q                G F  T  ELD ++EG  +F + S    + TR G FK
Sbjct: 61  QIPGGIQVGMGTMPVSVQKMFMQGDFKETKNELDLSIEGKGFFKVISNDEEVYTRAGNFK 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           +  DG++ + +G+     M      +    +          S +G V+  + L+S     
Sbjct: 121 MDKDGNICTPNGEKLQPAMTIPSDTMTISIDKSGTVTAFGPSGQGTVVGVIELHSFTNPA 180

Query: 168 GFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222
           G     ++                      T+ +GF+E SN + + EM  MI   + +  
Sbjct: 181 GLFSMGHNLYRKTDASGDAIAAAPGSDGMGTIAQGFIEMSNVDVVEEMVAMIMAQRAYEV 240

Query: 223 ITTLIDENEKSMLEAIR 239
            +  I   +  +  A  
Sbjct: 241 SSKSIQTADNMLQMANN 257


>gi|192361762|ref|YP_001982398.1| flagellar basal body rod protein FlgG [Cellvibrio japonicus
           Ueda107]
 gi|190687927|gb|ACE85605.1| flagellar basal-body rod protein FlgG [Cellvibrio japonicus
           Ueda107]
          Length = 261

 Score =  173 bits (437), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 43/261 (16%), Positives = 97/261 (37%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M ++  +      A +++L+T+++N++N  TVGF+  +  F +++   +           
Sbjct: 1   MHSALYVSKTGLAAQDRQLATISNNLANVATVGFKRDRAIFEDLLYQNQRQPGAQETQET 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+   T   LD A++G  +  +  P   I  TR+G+ 
Sbjct: 61  QLPSGLQLGTGVRVVATQKEFTEGNIQVTEQALDVAIDGRGFLQVLLPDGTIAYTRNGQL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           ++  +G +V+A G      +                V          + +  + L     
Sbjct: 121 QLNGEGQVVNADGYLLEPAIIVPEGVNKITIGSNGTVNAFAPGVADPQQLGDITLTDFIN 180

Query: 166 SQGFVRRENSGI-SPNIPPTPLE----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +          P++    +    ++K+G LE SN + + EM  MI   + +
Sbjct: 181 PSGLQAIGGNLFLETPASGNPVQGIPGENGMGSLKQGMLESSNVDIVEEMVNMITTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
              + ++   ++ +    +N+
Sbjct: 241 EMNSKVVSTADQMLQYITQNL 261


>gi|317013400|gb|ADU84008.1| flagellar basal body rod protein FlgG [Helicobacter pylori
           Lithuania75]
          Length = 262

 Score =  173 bits (437), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 45/261 (17%), Positives = 91/261 (34%), Gaps = 21/261 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S     +  LA +  + T ++N++N +T GF+  +  F+++                
Sbjct: 1   MLRSLYSATSGMLAQQTHIDTTSNNIANVNTTGFKKSRADFNDLFYQAMQYAGTNTSNTT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                      V           GS   T   LD A+ G  +F ++ P      TR G F
Sbjct: 61  LSPDGMEVGLGVRPSAITKMFSQGSPKETENNLDVAITGKGFFQVQLPDGTTAYTRSGNF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQKGKVIATMGLYSVDM 165
           K+ + G+LV++ G   +  +            +       +       VI  + L +   
Sbjct: 121 KLDEQGNLVTSEGYLLIPQITLPEDTTQVNIGVDGTVSVTQGLQTTSNVIGQITLANFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++  S           +        +++GFLE SN   + EM  +I   + +
Sbjct: 181 PAGLHSMGDNLFSITNASGNAIVGNPDSQGLGKLRQGFLELSNVRLVEEMTDLITAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
            + +  I   +  + + + ++
Sbjct: 241 EANSKSIQTADAML-QTVNSL 260


>gi|264676572|ref|YP_003276478.1| flagellar basal-body rod protein FlgG [Comamonas testosteroni
           CNB-2]
 gi|299531284|ref|ZP_07044694.1| flagellar basal-body rod protein FlgG [Comamonas testosteroni S44]
 gi|262207084|gb|ACY31182.1| flagellar basal-body rod protein FlgG [Comamonas testosteroni
           CNB-2]
 gi|298720691|gb|EFI61638.1| flagellar basal-body rod protein FlgG [Comamonas testosteroni S44]
          Length = 260

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 91/259 (35%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S  I      A + +L  ++ N++N  T G++     F +++         +     
Sbjct: 1   MINSLFIAKTGMEAQQTQLDVISHNLANVSTTGYKRANAVFEDLIYQNLRQSGSQTTEQN 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                      V +     +   GS   +   LD A+ G+ +F +  P   I  TRDG F
Sbjct: 61  QLPTGLHLGLGVRTVATSRNFLQGSLQQSSNALDVAINGNGFFEVNMPDGTIAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V   G LV++SG      +                V          + +  + +     
Sbjct: 121 EVDAQGQLVTSSGLPVANGITIPQGATKVSISHDGVVSVTMPGQAAPQQVGNIAMSQFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
           + G   R  +           +  +  T     +++G+LE SN N + E+  MI   + +
Sbjct: 181 AAGLEPRGQNLYVETASSGQPQQGTPGTNGLGTIQQGYLEASNVNVVQELVTMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  I  +++ + +  +
Sbjct: 241 EMNSKAIQTSDQMLAKLAQ 259


>gi|238764394|ref|ZP_04625344.1| Flagellar basal-body rod protein flgG [Yersinia kristensenii ATCC
           33638]
 gi|238697420|gb|EEP90187.1| Flagellar basal-body rod protein flgG [Yersinia kristensenii ATCC
           33638]
          Length = 260

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 92/259 (35%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A +  +  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           G+   T    D A++G+ +F ++ P G    TRDG F
Sbjct: 61  TLPSGLQIGTGVRPVATERLHSQGNLSKTDNTKDVAIKGEGFFQVQMPDGTNAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V  +G LV+ASG      +      +         V    +     + +  + L +   
Sbjct: 121 QVDQNGQLVTASGFQVQPAITIPANALKMTIGRDGIVSVTLQGQTATQQVGQLTLTTFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
           + G      +            +       G  + +G++E SN N   E+  MI   + +
Sbjct: 181 NSGLESVGENLYQETASSGAPNETTPGLNGGGLLYQGYVETSNVNVAEELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ + +  +
Sbjct: 241 EINSKAVSTSDQMLQKLTQ 259


>gi|219684370|ref|ZP_03539314.1| flagellar hook-basal body complex protein [Borrelia garinii PBr]
 gi|219672359|gb|EED29412.1| flagellar hook-basal body complex protein [Borrelia garinii PBr]
          Length = 282

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 50/280 (17%), Positives = 102/280 (36%), Gaps = 38/280 (13%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51
           M        +  +A   +L  V++N++N D VG++        F E++    ND      
Sbjct: 1   MVRGIYTAASGMMAERHKLDVVSNNLANIDLVGYKKDLSIQKAFPEMLIRRLNDDGLYKF 60

Query: 52  ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101
                     + +  + V   + Y   E G   +T   LD AL    +F +++  G   T
Sbjct: 61  PKGHLETAPIVGKLGTGVEENEIYTLFEQGPLKTTSNPLDLALTDQGFFVIQTSDGERYT 120

Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV------- 154
           R+G F +  +G LV+ SG   + +   + ++                S +          
Sbjct: 121 RNGSFTIGKEGILVTKSGFPVLGEKGYIYLKKNNFKITPQGQIFHNSSFESNPKRLVSEH 180

Query: 155 ---------IATMGLYSVDMSQGFVRRENSGIS---PNIPPTPLEDLSGVTVKRGFLEDS 202
                    + T+ + + +  +   ++ NS       +     ++      ++ G LE S
Sbjct: 181 ENSWENYELLDTIRIVNFENPRFLKKQGNSLWVDTKTSGKAQEIDISLRPKIETGALEAS 240

Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           N N++ EM  MI + + + +    I   +  + + I  I 
Sbjct: 241 NVNAVKEMVLMIEINRAYEANQKTIQTEDSLLGKLINEIG 280


>gi|269792757|ref|YP_003317661.1| flagellar basal-body rod protein FlgG [Thermanaerovibrio
           acidaminovorans DSM 6589]
 gi|269100392|gb|ACZ19379.1| flagellar basal-body rod protein FlgG [Thermanaerovibrio
           acidaminovorans DSM 6589]
          Length = 262

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 52/263 (19%), Positives = 92/263 (34%), Gaps = 23/263 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G    +A +  L  V+ N++N +T GF+ ++  F +++  I  +         
Sbjct: 1   MIRSLWSGATGMIAQQTNLDVVSHNLANVNTAGFKKLRADFQDLMYQIDREPGAPVEPAS 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q                G+   TG   D A+EGD +F +  P G    TRDG +
Sbjct: 61  MVPNGIQVGLGSRVSGTSRIMGQGNMQVTGNPTDVAIEGDGFFQVTMPDGTVAYTRDGAW 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           ++  +G +V+A G      +                V       Q  + I  + L     
Sbjct: 121 RIDGNGQIVTADGYLLEPAVTVPNNAKEIIISPTGQVSVLLPGDQNPQEIGQIQLARFVN 180

Query: 166 SQGFVRRENSGISPN------IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
             G      +           I   P E+  G T+ +  LE +N   + EM  MI   + 
Sbjct: 181 PGGLKALGKNLFIETPASGAPIVGNPGEEGLGTTI-QRTLEMANVQVVEEMVNMIVAQRA 239

Query: 220 FNSITTLIDENEKSMLEAIRNIA 242
           + + +  I   ++ +     N+ 
Sbjct: 240 YEANSKTIATADELL-RIANNLR 261


>gi|239907792|ref|YP_002954533.1| flagellar basal-body rod protein FlgG [Desulfovibrio magneticus
           RS-1]
 gi|239797658|dbj|BAH76647.1| flagellar basal-body rod protein FlgG [Desulfovibrio magneticus
           RS-1]
          Length = 260

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 46/257 (17%), Positives = 100/257 (38%), Gaps = 18/257 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S        +A++ ++ T+++N++N +TVGF+  + +F +++         +     
Sbjct: 1   MMRSLWTASTGMVAMQMQIDTMSNNLANVNTVGFKKSRAEFEDLMYQTLQVAGTETVGGN 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107
                      V     +     G   +TG +LD A++G+ +F ++     + TR G FK
Sbjct: 61  RLPTGLQVGLGVKPTTVHKFFTQGDMQNTGNQLDIAIQGEGFFKVDVNGRELYTRAGSFK 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           +  DG++V+A+G       +                   + +        + LY+   + 
Sbjct: 121 LNQDGTIVTANGYPLQPAFSVPTETKTITITENGHLSCLDANSAELAATDIPLYTFINNA 180

Query: 168 GFVRRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222
           G      +  S +            + +  T+ +GFLE SN   + EM  +I   + + +
Sbjct: 181 GLTAEGRNLYSTSQASGAANEVTPGNQNAGTLAQGFLEMSNVELVDEMVGLIVGQRAYEA 240

Query: 223 ITTLIDENEKSMLEAIR 239
            +  I   +  +  A+ 
Sbjct: 241 NSKSITTADGMLQTAVN 257


>gi|257457574|ref|ZP_05622741.1| flagellar basal-body rod protein FlgG [Treponema vincentii ATCC
           35580]
 gi|257444960|gb|EEV20036.1| flagellar basal-body rod protein FlgG [Treponema vincentii ATCC
           35580]
          Length = 264

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 48/260 (18%), Positives = 90/260 (34%), Gaps = 22/260 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ------ 54
           M  S         + +  + TVA+N++N +T GF+  + +F +++               
Sbjct: 1   MVRSLWTAATGMNSQQANIDTVANNLANVNTSGFKKQRAEFEDLLYQTIRAAGTPATEDT 60

Query: 55  -------KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                              + E GS   TG   D A+ G+ +F +    G    TRDG F
Sbjct: 61  ITPVGVEMGHGAKLAATQRNFEQGSLQQTGVSTDVAIAGEGFFRVLQYDGTYAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI---SQKGKVIATMGLYSV 163
           K+  D  LV+++G   + ++      +P    I   G              +  + LY  
Sbjct: 121 KIDADRQLVTSNGLRCLPEIIFPENYLPHTIAISQDGRVSVRVGEQDDPVEVGQIELYRF 180

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
               G   + ++                        +  FLE SN +++ EM  MI   +
Sbjct: 181 QNPVGLSAQGSNLFRQTPASGQAIAGRPGFNGFGKTEHKFLEMSNVSTVSEMVNMIVAQR 240

Query: 219 KFNSITTLIDENEKSMLEAI 238
            +   +  I  ++  +  A+
Sbjct: 241 AYEFNSKAIQTSDNMLGTAV 260


>gi|296126376|ref|YP_003633628.1| fagellar hook-basal body protein [Brachyspira murdochii DSM 12563]
 gi|296018192|gb|ADG71429.1| fagellar hook-basal body protein [Brachyspira murdochii DSM 12563]
          Length = 282

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 59/280 (21%), Positives = 103/280 (36%), Gaps = 38/280 (13%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS---EVVGAIKND------ 51
           M      G +  +A + RL  VA+N++N D  GF+   V F    E++ A   D      
Sbjct: 1   MVRGVYTGASGMMAEQARLDVVANNLANVDKPGFKRDTVSFKSFPEMMAARTEDDGVVIF 60

Query: 52  ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101
                     + +  + V   + +   E GS   TG +LD AL    +FA+E+P G   T
Sbjct: 61  PLGSTDVRPYVGRMGTGVEVNEVFTEWEQGSLRETGNQLDIALGDKGFFAVETPHGERYT 120

Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF---------------NVGEKG 146
           R+G F +  D  LV+  G   + +   + I+    +                   V    
Sbjct: 121 RNGSFLIDKDHYLVTKHGYKVMGENGYIQIKTNNFNIDEEGRVSINRRYQDGNTFVQFND 180

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV----TVKRGFLEDS 202
              +  +++ T+ +   D  +   +   S         P            V   FLE S
Sbjct: 181 NEWEDEEILDTLKIVRFDNERYLKKEGESFWVDTDISGPAYIAQKGVDRPKVLSRFLEMS 240

Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           N N + EM +MI + + +   +  I  ++  +   I  + 
Sbjct: 241 NVNPVNEMVRMIEVQRAYELNSKTISTHDTLVGRVINEVG 280


>gi|197120124|ref|YP_002140551.1| flagellar basal body rod protein FlgF [Geobacter bemidjiensis Bem]
 gi|197089484|gb|ACH40755.1| flagellar basal body rod protein FlgF [Geobacter bemidjiensis Bem]
          Length = 238

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 54/242 (22%), Positives = 101/242 (41%), Gaps = 6/242 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M +     L+  L+ ++RL  +++N++N++T GF+  +++F  V+  +KN   Q   F  
Sbjct: 1   MNSGIYAALSGNLSAQRRLDVISNNLANSNTSGFKADQIQFESVLANVKNPTQQAPVFSN 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
                         +    LD AL+GD +F + +P+G   TR G F  +  G LV+A G 
Sbjct: 61  DRYSTDYSPGAMQRTEN-ALDVALDGDGFFVVNTPQGPAYTRQGNFFRSQAGRLVNADGF 119

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
                  S+            +   GE+   G  + T+            +    G+   
Sbjct: 120 EVQGSGGSIA----IGGGKVEIAGNGEVVVNGATVGTLSKVDFPKPYQLTK-IGGGLFVP 174

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
             P      +  +VK+G+LE SN   + EM +MI  ++ F +    +   +    +A+  
Sbjct: 175 ANPQAAPAPTQASVKQGYLESSNVKVVVEMARMIEASRYFETCAKAVKSYDDMTAKAVNE 234

Query: 241 IA 242
           + 
Sbjct: 235 LG 236


>gi|221069320|ref|ZP_03545425.1| flagellar basal-body rod protein FlgG [Comamonas testosteroni KF-1]
 gi|220714343|gb|EED69711.1| flagellar basal-body rod protein FlgG [Comamonas testosteroni KF-1]
          Length = 260

 Score =  172 bits (436), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 91/259 (35%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S  I      A + +L  ++ N++N  T G++     F +++         +     
Sbjct: 1   MINSLFIAKTGMEAQQTQLDVISHNLANVSTTGYKRANAVFEDLIYQNLRQSGSQTTEQN 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                      V +     +   GS   +   LD A+ G+ +F +  P   I  TRDG F
Sbjct: 61  QLPTGLHLGLGVRTVATSRNFLQGSLQQSSNALDVAINGNGFFEVNMPDGTIAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V   G LV++SG      +                V          + +  + +     
Sbjct: 121 EVDSQGQLVTSSGLPVANGITIPQGATKVSISHDGVVSVTMPGQAAPQQVGNIAMSQFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
           + G   R  +           +  +  T     +++G+LE SN N + E+  MI   + +
Sbjct: 181 AAGLEPRGQNLYVETASSGQPQQGTPGTNGLGTIQQGYLEASNVNVVQELVTMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  I  +++ + +  +
Sbjct: 241 EMNSKAIQTSDQMLAKLAQ 259


>gi|323703177|ref|ZP_08114830.1| fagellar hook-basal body protein [Desulfotomaculum nigrificans DSM
           574]
 gi|323531836|gb|EGB21722.1| fagellar hook-basal body protein [Desulfotomaculum nigrificans DSM
           574]
          Length = 256

 Score =  172 bits (436), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 54/253 (21%), Positives = 104/253 (41%), Gaps = 14/253 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN--------DI 52
           M  S   G++     + R+  V +N++N +T GF+  +V F + +             + 
Sbjct: 1   MIRSLYSGVSGLKNHQIRMDVVGNNIANVNTNGFKASRVNFQDAISQTMRSASGTPAINP 60

Query: 53  DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDG 112
            Q  + V  G   ++   G   +TG  LD A++G+ +F L        TR+G F +  + 
Sbjct: 61  SQIGTGVKVGGISINAGQGPLQNTGRTLDLAIQGNGYFILTDGTNKYYTREGTFFIDINN 120

Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI--ATMGLYSVDMSQGFV 170
           +L+++ G                     ++ ++GEI   GK      +G+ + +   G  
Sbjct: 121 NLINSDGLQVCDTSGKAITLQTTPVNTISINDQGEIFVNGKTTSEGQVGIATCNNPAGLE 180

Query: 171 RRENSGI----SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
           R  N+      +   P       +G T+  G+LE SN +   EM  MI   + + +   +
Sbjct: 181 RVGNNLYKESLASGTPTPGTARAAGSTINSGYLEMSNVDLTEEMTNMITTQRGYQANARV 240

Query: 227 IDENEKSMLEAIR 239
           I  ++  + E I+
Sbjct: 241 ITVSDTLLEELIQ 253


>gi|302392940|ref|YP_003828760.1| flagellar basal-body rod protein FlgF [Acetohalobium arabaticum DSM
           5501]
 gi|302205017|gb|ADL13695.1| flagellar basal-body rod protein FlgF [Acetohalobium arabaticum DSM
           5501]
          Length = 245

 Score =  172 bits (435), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 52/248 (20%), Positives = 108/248 (43%), Gaps = 11/248 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKND---IDQ 54
           M        +   A  +R + + +N++N+ T G++  +     FSE++     D   I  
Sbjct: 1   MLRGLYTAASGMNASLKRTNIITNNLANSTTPGYKKDQTVNKSFSEMLLRRMPDKEVIGT 60

Query: 55  KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSL 114
                   +       GS   T    D+A+EG+ +FA+++P GI  TR G F +  DG +
Sbjct: 61  AGLGAKVDETVTDFSAGSVHKTDNPFDWAIEGEGFFAVQTPEGIRYTRSGDFTLNQDGQV 120

Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174
           V+ +G + +         +    E  NV  +  +   G+V+  + + +   + G V+  +
Sbjct: 121 VTQNGNFVL----GQAGPLEVVGEQVNVDNQNNLVVDGQVVDQVRVVTFAENDGLVKEGD 176

Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
                  P    + ++   + +G+LE SN N +  M  MI  T+ + S   ++   ++S+
Sbjct: 177 DLYRAT-PDVGNQFMATGKINQGYLESSNVNVVESMTNMIEATRHYESNQRVVKAYDQSL 235

Query: 235 LEAIRNIA 242
            + + ++ 
Sbjct: 236 DKTVNSVG 243


>gi|326792666|ref|YP_004310487.1| flagellar basal-body rod protein FlgF [Clostridium lentocellum DSM
           5427]
 gi|326543430|gb|ADZ85289.1| flagellar basal-body rod protein FlgF [Clostridium lentocellum DSM
           5427]
          Length = 255

 Score =  172 bits (435), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 55/257 (21%), Positives = 106/257 (41%), Gaps = 19/257 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVG----------A 47
           M               +RL  ++++++NT T G++        F EV+            
Sbjct: 1   MVRGLYTAATGMNVQAKRLEIISNDLANTTTTGYKKDVAVVSSFQEVLMTRLNDTQNQVP 60

Query: 48  IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107
               I          + Y     GS ISTG  +D A++GD +F +++P G   TRDG F 
Sbjct: 61  NNGPIGNITYGAKIDEVYTDFTQGSVISTGEMVDVAIQGDGFFVVQTPNGEAYTRDGNFS 120

Query: 108 VTDDGSLVSASGKYPVL--DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +   G LV+  G   +      ++  +         +  +GE++  G+ I T+ L   + 
Sbjct: 121 INQYGDLVTKEGYPVMGLDGPITLGEEFLTTGGDVVISSQGEVTLDGQYIDTLELARFED 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225
           S+   + +N+  S      P E      + +G+LE +N N +  M  MI +++ + +   
Sbjct: 181 SRALTKMDNNLYSSTAARLPFE----GKLIQGYLESANVNPVTAMVDMITVSRAYETNQK 236

Query: 226 LIDENEKSMLEAIRNIA 242
           +I   +  + +A+  + 
Sbjct: 237 MIQVQDSLLGKAVNELG 253


>gi|313672412|ref|YP_004050523.1| flagellar basal-body rod protein flgg [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312939168|gb|ADR18360.1| flagellar basal-body rod protein FlgG [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 262

 Score =  172 bits (435), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 51/261 (19%), Positives = 95/261 (36%), Gaps = 21/261 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +     +   A +  +  +A+N++N + +GF+  ++ F +++               
Sbjct: 1   MFRAMWTAASGMTAQQMNIDNIANNLANVNNIGFKKSRIHFEDLLYQEMRPAGGPTAAGI 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                 Q                G+F  TG +LD A+EGD +F +  P G I  TR+G F
Sbjct: 61  NHPTGIQIGLGTKVVATEKIFGQGNFQQTGNQLDIAIEGDGFFQVTMPDGTIGYTRNGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           K+  +G++V+A G      +A           +   V            +  + L     
Sbjct: 121 KLDSNGNIVTAEGYLLEPAIAVPENATSIIIGQDGTVSVTIPGDTNPTELGAIELARFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +   P          +  T     V +G LE SN N   EM  MI   + +
Sbjct: 181 PSGLKNIGRNLYQPTAASGEPVTGAPGTDAFGTVAQGILEMSNVNVAEEMVNMITGQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
              +  I  +++ + + + N+
Sbjct: 241 ELNSKAIQTSDEML-QVVNNL 260


>gi|253996317|ref|YP_003048381.1| flagellar basal-body rod protein FlgG [Methylotenera mobilis JLW8]
 gi|253982996|gb|ACT47854.1| flagellar basal-body rod protein FlgG [Methylotenera mobilis JLW8]
          Length = 260

 Score =  172 bits (435), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 89/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A + ++  +++N++N  T GF+  +  F +++               
Sbjct: 1   MIRSLWISKTGLDAQQTQMDVISNNLANVSTNGFKRSRAVFEDLLYQTIRQPGAQTSQQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+   TG + D A++G  +F +  P      TRDG F
Sbjct: 61  QLPSGLQLGTGVRPVATERIFTQGNIQQTGNDKDVAIQGAGFFQVLLPDGTTAYTRDGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V   G LV++SG      +                V      S     I  + L +   
Sbjct: 121 QVDFQGQLVTSSGFSVQPPITVPSNAQTLTVGRDGTVSVTLAGSTAVTQIGQLQLATFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +              +  T     + +G++E SN N + E+  MI   + +
Sbjct: 181 PAGLQGNGENLYVETAASGTANANTPGTNGAGLLTQGYVETSNVNVVEELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  I  +++ + +  +
Sbjct: 241 EINSKAITTSDQMLQKLTQ 259


>gi|157363238|ref|YP_001470005.1| hypothetical protein Tlet_0374 [Thermotoga lettingae TMO]
 gi|157313842|gb|ABV32941.1| protein of unknown function DUF1078 domain protein [Thermotoga
           lettingae TMO]
          Length = 249

 Score =  172 bits (435), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 48/250 (19%), Positives = 98/250 (39%), Gaps = 10/250 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV-------VGAIKNDID 53
           M           L    +L   A+N++N +TV ++  K+ F          +   +  I 
Sbjct: 1   MLRGIYTAAMGMLLDMSKLDVTANNLANVETVAYKRDKLAFRAYQDRAIYALPDRRQPIG 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113
                      +L   +G+F+ T   +DFA++G+ +F+L    G+  +R G FK+ ++G 
Sbjct: 61  NLTYSAVLDDVFLDSSMGTFMKTDNPMDFAIDGEGFFSLLGEDGVYYSRAGNFKLNEEGY 120

Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRE 173
           LV+  G   + +               +   +      G VI  +G+Y+ D      +  
Sbjct: 121 LVNTDGLMVLDENNQPIRFESSYVVDADGYIR---DPVGNVITRLGIYNFDDPGELRKIG 177

Query: 174 NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
            +   P              +  G++E SN N++ EM  +I   + F      +  ++++
Sbjct: 178 YTLFQPTEESGQPVVADEFRILSGYVELSNVNAIDEMVNLIEAQRHFEISQKALTVSDET 237

Query: 234 MLEAIRNIAS 243
           + + I  + S
Sbjct: 238 LAKLISQVGS 247


>gi|304310887|ref|YP_003810485.1| Flagellar basal-body rod protein [gamma proteobacterium HdN1]
 gi|301796620|emb|CBL44832.1| Flagellar basal-body rod protein [gamma proteobacterium HdN1]
          Length = 261

 Score =  172 bits (435), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 49/261 (18%), Positives = 98/261 (37%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  I  +   A + RLST+++N++N  T GF+     F +++  ++           
Sbjct: 1   MNAALWISKSGLSAQDLRLSTISNNLANVSTTGFKRDIAVFQDLLYQVQRQPGGQSSQDT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V +         G+  +TG  LD A+ G  +F +  P   I  TRDG F
Sbjct: 61  QLPSGLQVGTGVKTVATKKQHTEGTIQTTGQALDVAIMGRGFFQVLMPDGAIAYTRDGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-IATMGLYSVDM 165
           +++ +G LV+A G      +                    +   K ++ I  + L     
Sbjct: 121 QLSAEGDLVTAEGLSLEPAINVPEGSQSVTIGNDGTVTAVDGQTKQQIEIGNIQLADFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++     +      +         T+++  LE SN N + E+  MI   + +
Sbjct: 181 PAGLESVGSNLYRETVASGAPTEAQPGTDGTGTLQQNALEASNVNVVEELVNMIETQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
              + +I   ++ +    + +
Sbjct: 241 EMNSKVISTVDQMLSYVGQQL 261


>gi|253702433|ref|YP_003023622.1| flagellar basal-body rod protein FlgF [Geobacter sp. M21]
 gi|251777283|gb|ACT19864.1| flagellar basal-body rod protein FlgF [Geobacter sp. M21]
          Length = 237

 Score =  172 bits (435), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 57/242 (23%), Positives = 107/242 (44%), Gaps = 7/242 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M +     L+  L+ ++RL  +++N++N++T GF+  +++F  V+  +KN     +   +
Sbjct: 1   MNSGIYAALSGNLSAQRRLDVISNNLANSNTAGFKADQIQFESVLANVKNPTQTPVF--S 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           + +       G+   T   LD AL+GD +F + +P+G   TR G F  +  G LV+A G 
Sbjct: 59  NDRYSTDYSPGALQRTENALDLALDGDGFFVVNTPQGPAYTRQGNFFRSQAGRLVNADGF 118

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
                  ++            V   GE+   G  +AT+            +    G+   
Sbjct: 119 EVQGSGGAIA----IGGGKVEVSGNGEVVVNGATVATLSKVDFPKPYQLTK-IGGGLFVP 173

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
             P      +  TVK+G+LE SN   + EM +MI  ++ F + T  +   +    +A+  
Sbjct: 174 ANPQAAPAPTAATVKQGYLESSNVKVVVEMARMIEASRYFETCTKAVKSYDDMTAKAVNE 233

Query: 241 IA 242
           + 
Sbjct: 234 LG 235


>gi|49082998|gb|AAT50899.1| PA1082 [synthetic construct]
          Length = 262

 Score =  172 bits (435), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 50/262 (19%), Positives = 99/262 (37%), Gaps = 20/262 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M ++  +      A    L+T+++N++N  T GF+  + +F +++  I+           
Sbjct: 1   MLSALWVSKTGLSAQGMNLTTISNNLANVSTTGFKRDRAEFQDLLYQIRRQPGGQSTQDS 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                 Q  + V           GS  +T   LD A+ G  +F +  P G +  TRDG F
Sbjct: 61  ELPSGLQLGTGVRVVGTQKIFTPGSLQTTEQPLDMAVNGRGFFQVLLPDGTVSYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
            +  DG +V+++G      +      Q     +   V      + + +VI  +       
Sbjct: 121 HLNSDGQIVTSNGFALEPVIVVPNETQTFTVGQDGTVSVTTTGNAQPQVIGNIQTADFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     N+           +  +       TV +  LE+SN N + E+  MI   + +
Sbjct: 181 PAGLQAIGNNLFLETGSSGAPQVGTPGLNGLGTVAQNTLENSNVNVVEELVNMITTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNIA 242
              + +I   ++ +    +N+ 
Sbjct: 241 EMNSKVISTADQMLSFVTQNLG 262


>gi|315121852|ref|YP_004062341.1| flagellar basal body rod protein FlgF [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495254|gb|ADR51853.1| flagellar basal body rod protein FlgF [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 243

 Score =  172 bits (435), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 181/241 (75%), Positives = 213/241 (88%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           MQ+SFNIGL+AQ+ALE+RLSTVADN+SN++T GFR IKVKFSEV+ +IKNDIDQKISFVA
Sbjct: 1   MQSSFNIGLSAQIALEKRLSTVADNISNSNTSGFRAIKVKFSEVINSIKNDIDQKISFVA 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
            G EYLSK+ GS  +TG ELDFALEGDAWF+L++PRGIILTRDGRFK+ +DG+L+S+SG+
Sbjct: 61  QGNEYLSKQNGSLTNTGGELDFALEGDAWFSLQTPRGIILTRDGRFKIREDGTLISSSGR 120

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
           YPVLDM   PI IP KDE F VGE+GEISQKGK IA MG YS D+S+GFVRRENSGI PN
Sbjct: 121 YPVLDMEGAPIHIPHKDEAFEVGEEGEISQKGKKIAAMGFYSADLSKGFVRRENSGIFPN 180

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
           IPP P+ D S +TVKRG++EDSNANSMYEMGQMIHLTQKFNSIT LID+++KS LEAI+N
Sbjct: 181 IPPVPVLDPSDITVKRGYIEDSNANSMYEMGQMIHLTQKFNSITELIDDSDKSFLEAIKN 240

Query: 241 I 241
           +
Sbjct: 241 L 241


>gi|291280521|ref|YP_003497356.1| flagellar basal-body rod protein FlgG [Deferribacter desulfuricans
           SSM1]
 gi|290755223|dbj|BAI81600.1| flagellar basal-body rod protein FlgG [Deferribacter desulfuricans
           SSM1]
          Length = 254

 Score =  171 bits (434), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 56/253 (22%), Positives = 102/253 (40%), Gaps = 13/253 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M        +  LA  ++L  +++N++N +T  ++     F + +   K           
Sbjct: 1   MLNGLYTATSGMLAQNRKLEIISNNLANINTTSYKREDAIFRDYLYHDKRTPQDIIKASE 60

Query: 54  ---QKISFVASGKEYLSKEVGSFISTGTELDFALEG-DAWFALESPRGIILTRDGRFKVT 109
                 + V+    Y     G+   TG   D ALE  + +FA+E+P GI  TRDG F + 
Sbjct: 61  YNKTINNTVSLDSIYTDFSPGNLRQTGNRFDLALENKNTFFAVETPFGIRFTRDGHFTLD 120

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169
            D  LV+  G   +         I   D    + E GEI   G ++  + +  VD     
Sbjct: 121 KDRRLVNQDGFPVLSRNFENNEGIILPDGEVTITENGEIMVDGVILDQLFIAEVDDPSKM 180

Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
            +   +  +        ++ +   V++G+LE SN N + EM  MI   + F +   +I  
Sbjct: 181 QKMGRNLYA--AIGFMPDESTNPGVRQGYLEGSNVNPVKEMVSMIESMRGFETYQKVIQT 238

Query: 230 NEKSMLEAIRNIA 242
            ++   ++  +I 
Sbjct: 239 IDEINSKSSNDIG 251


>gi|120554035|ref|YP_958386.1| flagellar basal body rod protein FlgG [Marinobacter aquaeolei VT8]
 gi|120323884|gb|ABM18199.1| flagellar basal-body rod protein FlgG [Marinobacter aquaeolei VT8]
          Length = 262

 Score =  171 bits (434), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 47/262 (17%), Positives = 91/262 (34%), Gaps = 20/262 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  +      A +  +ST+++N++N +T GF+  K  F +++  I            
Sbjct: 1   MNPALWVSKTGLSAQDINMSTISNNLANVNTTGFKRDKAVFQDLLYQINRQPGGLSTQNS 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+   T   LD A+ G  +  +  P   I  TRDG+F
Sbjct: 61  ELPSGLQLGTGVRVVGTVKQFSQGNLQITEQPLDMAINGRGFLQILLPDGQIAYTRDGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           ++  +G +V+  G      +                V    +       +  + L     
Sbjct: 121 QLNVNGDVVNPDGYLLEPAINVPNNATNITIGTDGTVTAITDDQAAPVNVGQITLVDFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
            QG     N+     I      +         T+++G LE SN   + E+  MI   + +
Sbjct: 181 PQGLQAIGNNLFKETISSGNPIEGQAGLLGLGTIEQGSLEASNVEVVEELVNMITTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNIA 242
              + ++   ++ +     NI 
Sbjct: 241 EMNSKVVSTADQMLQFITNNIG 262


>gi|320537132|ref|ZP_08037104.1| flagellar basal-body rod protein FlgG [Treponema phagedenis F0421]
 gi|320146005|gb|EFW37649.1| flagellar basal-body rod protein FlgG [Treponema phagedenis F0421]
          Length = 264

 Score =  171 bits (434), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 47/260 (18%), Positives = 92/260 (35%), Gaps = 22/260 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S     +   + +  + TVA+N++N +T GF+  + +F +++               
Sbjct: 1   MIRSLWTAASGMNSQQANIDTVANNLANVNTSGFKKQRAEFEDLLYQTVKSAGTPATEDT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q              E G+   TG   D A+ G+ +F +    G    TRDG F
Sbjct: 61  ITPVGIQMGHGSKLAATQRIFEQGALQHTGLTSDVAVAGEGFFRVLQYDGTYAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI---SQKGKVIATMGLYSV 163
           K+  D  LV+++G   + ++      + +   I   G          +   +  + LY  
Sbjct: 121 KIDADRQLVTSNGLRVLPEIIFPENYVERSIAISQDGRVTVRVGEEDEPIDVGQIELYRF 180

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
             + G     ++                        +  FLE SN +++ EM  MI   +
Sbjct: 181 QNNAGLAAEGSNLFKQTPASGQAIPGRPGFNGFGKTEHKFLEMSNVSTVSEMVNMIVAQR 240

Query: 219 KFNSITTLIDENEKSMLEAI 238
            +   +  I  ++  +  A+
Sbjct: 241 AYEFNSKAIQTSDNMLGTAV 260


>gi|51599026|ref|YP_073214.1| flagellar hook-basal body complex protein [Borrelia garinii PBi]
 gi|51573597|gb|AAU07622.1| flagellar hook-basal body complex protein [Borrelia garinii PBi]
          Length = 282

 Score =  171 bits (434), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 49/280 (17%), Positives = 102/280 (36%), Gaps = 38/280 (13%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51
           M        +  +A   +L  V++N++N D +G++        F E++    ND      
Sbjct: 1   MVRGIYTAASGMMAERHKLDVVSNNLANIDLIGYKKDLSIQKAFPEMLIRRLNDDGLYKF 60

Query: 52  ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101
                     + +  + V   + Y   E G   +T   LD AL    +F +++  G   T
Sbjct: 61  PKGHLETAPIVGKLGTGVEENEIYTLFEQGPLKTTSNPLDLALTDQGFFVIQTSDGERYT 120

Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV------- 154
           R+G F +  +G LV+ SG   + +   + ++                S +          
Sbjct: 121 RNGSFTIGKEGILVTKSGFPVLGEKGYIYLKKNNFKITPQGQIFHNSSFESNPKRLVSEH 180

Query: 155 ---------IATMGLYSVDMSQGFVRRENSGIS---PNIPPTPLEDLSGVTVKRGFLEDS 202
                    + T+ + + +  +   ++ NS       +     ++      ++ G LE S
Sbjct: 181 ENSWENYELLDTIRIVNFENPRFLKKQGNSLWVDTKTSGKAQEIDISLRPKIETGALEAS 240

Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           N N++ EM  MI + + + +    I   +  + + I  I 
Sbjct: 241 NVNAVKEMVLMIEINRAYEANQKTIQTEDSLLGKLINEIG 280


>gi|294635612|ref|ZP_06714089.1| flagellar basal-body rod protein FlgG [Edwardsiella tarda ATCC
           23685]
 gi|291091064|gb|EFE23625.1| flagellar basal-body rod protein FlgG [Edwardsiella tarda ATCC
           23685]
          Length = 260

 Score =  171 bits (434), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 86/259 (33%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A +  +  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MIRSLYIAKTGLEAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTLRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+   T    D A++G  +F +  P      TRDG F
Sbjct: 61  TLPSGLQLGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVTLPDGSQAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V  +G LV+ASG      +                V    +     + +  + L +   
Sbjct: 121 QVDQNGQLVTASGFQVSPAITIPANATSMTIGRDGIVSVTVQGQAAAQQVGQLTLSTFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +            + +        + +G++E SN N   E+  MI   + +
Sbjct: 181 DAGLESVGENLYQETDSSGAPTESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  I  +++ +    +
Sbjct: 241 EINSKAISTSDQMLQRLTQ 259


>gi|149194278|ref|ZP_01871375.1| flagellar basal-body rod protein distal rod protein [Caminibacter
           mediatlanticus TB-2]
 gi|149135453|gb|EDM23932.1| flagellar basal-body rod protein distal rod protein [Caminibacter
           mediatlanticus TB-2]
          Length = 262

 Score =  171 bits (434), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 46/261 (17%), Positives = 100/261 (38%), Gaps = 21/261 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S        +A + ++  V++N+SN +T+G++  + +F+++                
Sbjct: 1   MVRSLYTAATGMMAQQTQIDVVSNNISNVNTIGYKKQRAEFADLFYQTMEYAGTATSTTT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                      V           G+   T   LD A++GD +F ++ P   I  TRDG F
Sbjct: 61  KSPTGINVGLGVRPTAITKIFTQGNLKQTNNNLDLAIQGDGFFQVQLPDGRIGYTRDGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           K+  DG++V++ G   + ++   P  +         V        + + I  + L     
Sbjct: 121 KLDADGNIVTSDGYKLIPNITLPPDTVQVSIGTDGTVSILQAGQTQMQQIGQIQLAKFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++                       +++GF+E SN   + EM  +I   + +
Sbjct: 181 PAGLHSLGSNLYINTSASGDPIVDVPGQTGLGEIRQGFIEMSNVQLVEEMTDLITGQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
           ++ +  I  +++ + + + N+
Sbjct: 241 DAASKAIMTSDEML-QTVNNL 260


>gi|322380502|ref|ZP_08054691.1| flagellar basal body rod protein FlgG [Helicobacter suis HS5]
 gi|321147069|gb|EFX41780.1| flagellar basal body rod protein FlgG [Helicobacter suis HS5]
          Length = 262

 Score =  171 bits (434), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 45/261 (17%), Positives = 92/261 (35%), Gaps = 21/261 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S        L  +  + T ++N++N +TVGF+  +  F+++                
Sbjct: 1   MLRSLYSATTGMLGQQTHIDTTSNNIANVNTVGFKRQRADFNDLFYQALQYAGTSTSDTT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                      V +         GS   T   LD A+ G  +F ++ P      TR G F
Sbjct: 61  RSPNGIEVGLGVRTASVTKMFSQGSPKETENNLDIAITGKGFFQIQMPDGSTAYTRAGNF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGE-ISQKGKVIATMGLYSVDM 165
           K+ D G++V+  G   +  +            +       +  +    VI  + L +   
Sbjct: 121 KIDDQGNMVTTEGYLLIPQITFPQDTTQISIGVDGTVSVTQGNASTSNVIGQITLANFIN 180

Query: 166 SQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++ ++      P             +++GFLE SN   + EM  +I   + +
Sbjct: 181 PAGLHALGDNLLAVTSASGPAIVGNANSDGYGQLRQGFLELSNVRLVEEMTDLITAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
            + +  I   +  + + + ++
Sbjct: 241 EANSKTIQTADNML-QTVNSL 260


>gi|254505064|ref|ZP_05117215.1| flagellar basal-body rod protein FlgG [Labrenzia alexandrii DFL-11]
 gi|222441135|gb|EEE47814.1| flagellar basal-body rod protein FlgG [Labrenzia alexandrii DFL-11]
          Length = 262

 Score =  171 bits (434), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 47/262 (17%), Positives = 91/262 (34%), Gaps = 21/262 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----------- 50
             +  I      A +  +  VA+N++N +T  F+  + +FS+++   +            
Sbjct: 1   MKALAIAATGMSAQQLNVEVVANNIANMNTTSFKRAQAEFSDLLYQAERLQGVPNRGGED 60

Query: 51  ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
              +  Q    V +         G   +TG + D AL+G  WF +  P    + TR G F
Sbjct: 61  PVPEGAQLGLGVKTAGIRKLHMQGPLTNTGNQFDIALDGRGWFEITGPDDESLYTRAGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQ-KDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
               DG LV+  G      +      I    +E   V  K +   + + I  + L +   
Sbjct: 121 NKNADGRLVTIDGYTVEPAIIVPEETIEVVINETGQVYSKIDGEIQPREIGQLSLANFAN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +                       V++G+LE SN + + E+  +I   + +
Sbjct: 181 DVGLEPVGGNLFRETPASGAPVAGVPGDPGFGVVRQGYLESSNVDPVKEITALISAQRGY 240

Query: 221 NSITTLIDENEKSMLEAIRNIA 242
              + ++   ++        I 
Sbjct: 241 EMNSKVMKAADEMANTVTNGIR 262


>gi|146277706|ref|YP_001167865.1| flagellar basal-body rod protein FlgG [Rhodobacter sphaeroides ATCC
           17025]
 gi|145555947|gb|ABP70560.1| flagellar basal-body rod protein FlgG [Rhodobacter sphaeroides ATCC
           17025]
          Length = 262

 Score =  171 bits (434), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 39/259 (15%), Positives = 90/259 (34%), Gaps = 20/259 (7%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------- 55
            + ++      A + R+  +++N++N +T GF+  +  F  ++         +       
Sbjct: 4   NAMHVAKTGLNAQQTRMQVISNNLANVNTTGFKRDRANFESLLYQTWKPGGAQTSEATAM 63

Query: 56  ------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKV 108
                  + V           GS  +T   LD A++G  +F +  P G +  TR+G F  
Sbjct: 64  TSPSAVGTGVRVVSTEKLYTQGSLANTDNALDLAIDGPGFFQVLLPDGRMGYTRNGTFSQ 123

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDMSQ 167
             +G++ + SG     ++      +         V        + + +  + + +    +
Sbjct: 124 NAEGTITTPSGYVVQPEIQIPEGAVSVTISADGIVSVLMPDETEAQEVGQITIATFANPR 183

Query: 168 GFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222
           G      +              +        + +G LE SN N + E+  MI   + +  
Sbjct: 184 GLQPVGETFAVETAASGEAAIGNPVEPGFGKLVQGALESSNVNVVQELVDMIETQRAYEV 243

Query: 223 ITTLIDENEKSMLEAIRNI 241
            +  I  +++ M      +
Sbjct: 244 NSKSISASDEMMQYLANKL 262


>gi|269138584|ref|YP_003295284.1| flagellar basal body rod protein [Edwardsiella tarda EIB202]
 gi|267984244|gb|ACY84073.1| flagellar basal body rod protein [Edwardsiella tarda EIB202]
 gi|304558594|gb|ADM41258.1| Flagellar basal-body rod protein FlgG [Edwardsiella tarda FL6-60]
          Length = 260

 Score =  171 bits (434), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 86/259 (33%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A +  +  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MIRSLYIAKTGLEAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTLRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+   T    D A++G  +F +  P      TRDG F
Sbjct: 61  TLPSGLQLGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVTLPDGSQAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V  +G LV+ASG      +                V    +     + +  + L +   
Sbjct: 121 QVDQNGQLVTASGFQVTPAITIPANATSMTIGRDGIVSVTLQGQAAAQQVGQLTLSTFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +            + +        + +G++E SN N   E+  MI   + +
Sbjct: 181 DAGLESVGENLYQETESSGAPTESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  I  +++ +    +
Sbjct: 241 EINSKAISTSDQMLQRLTQ 259


>gi|203284668|ref|YP_002222408.1| flagellar basal-body rod protein [Borrelia duttonii Ly]
 gi|201084111|gb|ACH93702.1| flagellar basal-body rod protein [Borrelia duttonii Ly]
          Length = 265

 Score =  171 bits (433), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 50/263 (19%), Positives = 94/263 (35%), Gaps = 23/263 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +     +   A +  + T+A+N+SN +T+GF+ I+ +F +++   +           
Sbjct: 1   MMRALWTSASGMKAQQYNVDTIANNLSNVNTIGFKKIRAEFEDLIYQTQRRAGTPATENT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                            +   E G+   T    D A+EGD ++ +    G    TRDG F
Sbjct: 61  VTPLGNQVGHGTKVSATHRLFEQGNLQVTNLNTDVAIEGDGFYKVLLSDGTYGYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG---KVIATMGLYSV 163
           K+  +G+LV+  G   + +++     I     I   G       +G     +  + +   
Sbjct: 121 KIDANGNLVTNQGYILLPEISFPEEYIKNSIAISQEGIISVKVNEGLEPIELGQIEIARF 180

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
               G     N+     I                 +K+G LE SN     EM  MI   +
Sbjct: 181 VNPAGLNAIGNNIFKETIGSGEEISGIPGSNGMGKLKQGMLEMSNVAIAEEMVTMIVAQR 240

Query: 219 KFNSITTLIDENEKSMLEAIRNI 241
            +   +  I  ++  +     N+
Sbjct: 241 AYEINSKAIHTSDNMLG-IANNL 262


>gi|21242725|ref|NP_642307.1| flagellar basal body rod protein FlgG [Xanthomonas axonopodis pv.
           citri str. 306]
 gi|78047584|ref|YP_363759.1| flagellar basal body rod protein FlgG [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|294624042|ref|ZP_06702805.1| flagellar biosynthesis cell-distal portion of basal-body rod
           [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           11122]
 gi|294665577|ref|ZP_06730858.1| flagellar biosynthesis cell-distal portion of basal-body rod
           [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           10535]
 gi|325927973|ref|ZP_08189194.1| flagellar basal-body rod protein FlgG [Xanthomonas perforans
           91-118]
 gi|21108201|gb|AAM36843.1| flagellar biosynthesis cell-distal portion of basal-body rod
           [Xanthomonas axonopodis pv. citri str. 306]
 gi|78036014|emb|CAJ23705.1| flagella basal body rod protein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|292601661|gb|EFF45635.1| flagellar biosynthesis cell-distal portion of basal-body rod
           [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           11122]
 gi|292604675|gb|EFF48045.1| flagellar biosynthesis cell-distal portion of basal-body rod
           [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           10535]
 gi|325541658|gb|EGD13179.1| flagellar basal-body rod protein FlgG [Xanthomonas perforans
           91-118]
          Length = 261

 Score =  171 bits (433), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 49/261 (18%), Positives = 91/261 (34%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  +      A + R+S +++N++NT+T GF+  +  F +++               
Sbjct: 1   MNQALWVAKTGLDAQQTRMSVISNNLANTNTTGFKRDRAAFEDLLYQQVRAPGGSTSAQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V     +   + GS   TG  LD  + G  +F ++ P G    TRDG F
Sbjct: 61  QLPTGLQLGTGVRVVSTFKGFDQGSQQQTGRALDVMVNGRGFFEVQMPDGTSAYTRDGTF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165
           ++   G LV+ SG      +                           + I  + L     
Sbjct: 121 QINAQGELVTNSGYPLQPGIQVPEGAQSLTIGNDGTISVTLAGQAAAQEIGALTLTDFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   +  +         P ++ +       T  +G LE SN N++ E+  MI   + +
Sbjct: 181 PSGLQAKGENLFVETTASGPAQNGTPGLNGLGTTVQGALEGSNVNTVEELVSMIETQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
                 I   +  +     N+
Sbjct: 241 EMNAKAISTTDSMLGYLNNNV 261


>gi|325923276|ref|ZP_08184949.1| flagellar basal-body rod protein FlgG [Xanthomonas gardneri ATCC
           19865]
 gi|325546203|gb|EGD17384.1| flagellar basal-body rod protein FlgG [Xanthomonas gardneri ATCC
           19865]
          Length = 261

 Score =  171 bits (433), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 48/261 (18%), Positives = 91/261 (34%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  +      A + R+S +++N++NT+T GF+  +  F +++               
Sbjct: 1   MNQALWVAKTGLDAQQTRMSVISNNLANTNTTGFKRDRAAFEDLLYQQVRAPGGSTSAQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V     +   + GS   TG  LD  + G  +F ++ P G    TRDG F
Sbjct: 61  QLPTGLQLGTGVRVVSTFKGFDQGSQQQTGRALDVMVNGRGFFEVQMPDGTSAYTRDGTF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165
           ++   G +V+ SG      +                           + I  + L     
Sbjct: 121 QINAQGEVVTNSGYPLQPGIQVPEGAQSLTIGNDGTISVTLAGQAAAQEIGALTLTDFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   +  +         P ++ +       T  +G LE SN N++ E+  MI   + +
Sbjct: 181 PSGLQSKGENLFVETTASGPAQNGTPGLNGLGTTVQGALEGSNVNTVEELVSMIETQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
                 I   +  +     N+
Sbjct: 241 EMNAKAISTTDSMLGYLNNNV 261


>gi|300870897|ref|YP_003785768.1| flagellar hook-basal body complex protein FlhO [Brachyspira
           pilosicoli 95/1000]
 gi|300688596|gb|ADK31267.1| flagellar hook-basal body complex protein, FlhO [Brachyspira
           pilosicoli 95/1000]
          Length = 282

 Score =  171 bits (433), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 56/280 (20%), Positives = 102/280 (36%), Gaps = 38/280 (13%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS---EVVGAIKND------ 51
           M      G +  +A + RL  VA+N++N D  GF+     F    E++ A   D      
Sbjct: 1   MVRGVYTGASGMIAEQYRLDVVANNLANVDKPGFKRDTATFKAFPEMMAARTEDDGVVIF 60

Query: 52  ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101
                     + +  + V   + +   E GS   TG +LD AL    +FA+E+P G   T
Sbjct: 61  PLGSTDIRPYVGRLGTGVEVNEVFTEWEQGSLRETGNQLDIALGDKGFFAVETPHGERYT 120

Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKD---------------EIFNVGEKG 146
           R+G F +  D  LV+  G   + +   + I+    +                   V    
Sbjct: 121 RNGSFLIDKDNYLVTKHGYKVMGENGYIQIKSNNFNIDEEGRISINRRYQDNEDFVQFND 180

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV----TVKRGFLEDS 202
              +  +++ T+ +   +  +   +   S         P            V   FLE S
Sbjct: 181 NEWEDEEILDTLKIVRFENERYLKKEGESFWVDTDISGPAYIAQKGVDRPKVLSRFLEMS 240

Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           N N + EM +MI + + +   +  I  ++  +   +  + 
Sbjct: 241 NVNPINEMVRMIEVQRAYELNSKTISTHDTLIGRVVNEVG 280


>gi|238794000|ref|ZP_04637618.1| Flagellar basal-body rod protein flgG [Yersinia intermedia ATCC
           29909]
 gi|238726632|gb|EEQ18168.1| Flagellar basal-body rod protein flgG [Yersinia intermedia ATCC
           29909]
          Length = 260

 Score =  171 bits (433), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 91/259 (35%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A +  +  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTMRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           G+   T    D A++G+ +F ++ P G    TRDG F
Sbjct: 61  TLPSGLQIGTGVRPVATERLHSQGNLSKTDNTKDIAIKGEGFFQVQMPDGTNAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQI-PQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V  +G LV++ G      +      +         V    +     + +  + L +   
Sbjct: 121 QVDQNGQLVTSGGFQVQPAITIPANALSMTVGRDGIVSVTLQGQTATQQVGQLTLTTFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
           + G      +            +       G  + +G++E SN N   E+  MI   + +
Sbjct: 181 NSGLESIGENLYQETASSGAPNETTPGLNGGGLLYQGYVETSNVNVAEELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ + +  +
Sbjct: 241 EINSKAVSTSDQMLQKLTQ 259


>gi|238799109|ref|ZP_04642565.1| Flagellar basal-body rod protein flgG [Yersinia mollaretii ATCC
           43969]
 gi|238717056|gb|EEQ08916.1| Flagellar basal-body rod protein flgG [Yersinia mollaretii ATCC
           43969]
          Length = 260

 Score =  171 bits (433), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 91/259 (35%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A +  +  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTMRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           G+   T    D A++G+ +F ++ P G    TRDG F
Sbjct: 61  TLPSGLQIGTGVRPVATERLHSQGNLSKTDNTKDIAIKGEGFFQVQMPDGTNAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQI-PQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V  +G LV++ G      +      +         V    +     + +  + L +   
Sbjct: 121 QVDQNGQLVTSGGFQVQPAITVPANALSMTVGRDGIVSVTLQGQTATQQVGQLTLTTFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
           + G      +            +       G  + +G++E SN N   E+  MI   + +
Sbjct: 181 NSGLESIGENLYQETASSGAPNETTPGLNGGGLLYQGYVETSNVNVAEELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ + +  +
Sbjct: 241 EINSKAVSTSDQMLQKLTQ 259


>gi|317050615|ref|YP_004111731.1| flagellar basal-body rod protein FlgG [Desulfurispirillum indicum
           S5]
 gi|316945699|gb|ADU65175.1| flagellar basal-body rod protein FlgG [Desulfurispirillum indicum
           S5]
          Length = 262

 Score =  171 bits (433), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 90/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +        +A +  +  +++N++N +T GF+  +V+F +++               
Sbjct: 1   MIRALWTASTGMMAQQTHIDNISNNLANVNTGGFKKSRVEFQDLMYQTIKPAGASTAAGI 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                 Q    V           GS I TG +LD  +E D +F ++ P G    TR+G F
Sbjct: 61  TRPVGEQLGLGVKVAGITKMHTQGSIIQTGNQLDMTIEKDGYFQIQMPDGTTGYTRNGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
              ++G +V+  G      +      +         V  +     + + +  +       
Sbjct: 121 TKNNNGEIVTVEGFLLEPGIQIPDDAVEIYVGRDGTVSVQIGNQNQMQELGQITTAKFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +           +       S   + +GFLE SN   + EM  MI   + +
Sbjct: 181 PAGLESVGGNIFKETSASGAPQVGIPGEDSFGAIAQGFLEQSNVQLVEEMVNMISAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  I   ++ +  A +
Sbjct: 241 EINSKAITTGDEMLQTATQ 259


>gi|91776311|ref|YP_546067.1| flagellar basal-body rod FlgG [Methylobacillus flagellatus KT]
 gi|91710298|gb|ABE50226.1| Flagellar basal-body rod FlgG [Methylobacillus flagellatus KT]
          Length = 261

 Score =  171 bits (433), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 48/260 (18%), Positives = 87/260 (33%), Gaps = 21/260 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A + ++  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MIRSLWIAKTGLDAQQMQMDVIANNLANVSTNGFKKTRAVFEDLLYQNIRQPGAQSSQQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+   TG   D A+ G+ +F +  P      TRDG F
Sbjct: 61  QLPSGLQLGTGVRPVATERIHIQGNLQQTGNNKDVAISGEGFFQVLLPDGSTAYTRDGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPI--QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
           ++ + G LV+ASG      +   P    +    +        +       I T  L +  
Sbjct: 121 QLDNQGQLVTASGFTVQPAIIVPPNALSLTVGRDGTVSVVLPDNPNNAVQIGTFQLATFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G   R  +         P             +   +LE SN N   E+  MI   + 
Sbjct: 181 NPAGLQSRGENLYIETAASGPANINQPGLNGTGLLVHQYLETSNVNVAEELVSMIQTQRA 240

Query: 220 FNSITTLIDENEKSMLEAIR 239
           +   +  I  +++ +    +
Sbjct: 241 YEINSKAISTSDQMLQRLSQ 260


>gi|320536024|ref|ZP_08036083.1| putative flagellar basal-body rod protein FlgF [Treponema
           phagedenis F0421]
 gi|320147123|gb|EFW38680.1| putative flagellar basal-body rod protein FlgF [Treponema
           phagedenis F0421]
          Length = 271

 Score =  171 bits (433), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 50/267 (18%), Positives = 100/267 (37%), Gaps = 26/267 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51
           M   +    +   A +Q+L  +++N++N DT  ++        F E++    ND      
Sbjct: 1   MIRGWYTAASGMNAQQQQLDVISNNLANVDTTSYKRDVTINKNFPELLLRRTNDDGVIKN 60

Query: 52  ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101
                     I +    V   + +   E GS   T +  D ALEG  +FA+++P+    T
Sbjct: 61  PFGSSDAAPIIGKLGLGVEVNEVFTEFEQGSLKQTHSPSDIALEGKGFFAVQTPQREEYT 120

Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMA----SVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157
           R+G F V  +G L++  G   + +              ++         E       +  
Sbjct: 121 RNGNFLVGVEGYLMTKEGYPVLGENGRIFLQDMEYKINQNGEIYARPITEPDTDAVFLDR 180

Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPL---EDLSGVTVKRGFLEDSNANSMYEMGQMI 214
           + + + +  +   ++ +S         P    E        +GF+E SN N + EM +MI
Sbjct: 181 LKIVTFENDRYLQKKGSSFYLDTPVSGPAIAAEGPDRPVTVQGFIEASNVNVVNEMVRMI 240

Query: 215 HLTQKFNSITTLIDENEKSMLEAIRNI 241
            + + + +    I   +  M +    +
Sbjct: 241 EVNRAYEANQKTIQSEDTMMAKLWNEV 267


>gi|121997317|ref|YP_001002104.1| flagellar basal-body rod protein FlgG [Halorhodospira halophila
           SL1]
 gi|121588722|gb|ABM61302.1| flagellar basal-body rod protein FlgG [Halorhodospira halophila
           SL1]
          Length = 261

 Score =  171 bits (433), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 44/261 (16%), Positives = 88/261 (33%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +  +      A ++ +   ++N++N +T GF+  +  F ++          +     
Sbjct: 1   MDPALWVAKTGLDAQQKSMQVTSNNLANVNTNGFKKDRANFEDLFYQTVRQPGSRASQDN 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                    +             G+   T   LD A+EG  +  +  P G +  TRDG  
Sbjct: 61  LLPSGLMLGTGSRVMGTEKIHSQGNVQQTERSLDVAIEGKGFLQVLRPDGQVGYTRDGAL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           ++ ++G +V++ G      +                V  K    ++ + I  + L     
Sbjct: 121 QLNENGEIVTSGGYLLEPGIQVPEEAETISIGSDGTVSAKIPGDEEPEEIGQIELADFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +           E  +        V +G LE SN N   E+  MI   + F
Sbjct: 181 PSGLEPVGENMFLETAASGAPEVGAPGEGALGNVMQGALETSNVNIAEELVNMIENQRGF 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
            + T  I   ++ +    +N+
Sbjct: 241 ETNTRAISTTDEMLQFLNQNV 261


>gi|21231395|ref|NP_637312.1| flagellar basal body rod protein FlgG [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66768552|ref|YP_243314.1| flagellar basal body rod protein FlgG [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|188991639|ref|YP_001903649.1| flagellar basal body rod protein FlgG [Xanthomonas campestris pv.
           campestris str. B100]
 gi|325916945|ref|ZP_08179189.1| flagellar basal-body rod protein FlgG [Xanthomonas vesicatoria ATCC
           35937]
 gi|21113060|gb|AAM41236.1| flagellar biosynthesis, cell-distal portion of basal-body rod
           [Xanthomonas campestris pv. campestris str. ATCC 33913]
 gi|66573884|gb|AAY49294.1| flagellar biosynthesis, cell-distal portion of basal-body rod
           [Xanthomonas campestris pv. campestris str. 8004]
 gi|167733399|emb|CAP51600.1| unnamed protein product [Xanthomonas campestris pv. campestris]
 gi|325536848|gb|EGD08600.1| flagellar basal-body rod protein FlgG [Xanthomonas vesicatoria ATCC
           35937]
          Length = 261

 Score =  171 bits (433), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 48/261 (18%), Positives = 91/261 (34%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  +      A + R+S +++N++NT+T GF+  +  F +++               
Sbjct: 1   MNQALWVAKTGLDAQQTRMSVISNNLANTNTTGFKRDRAAFEDLLYQQVRAPGGSTSAQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V     +   + GS   TG  LD  + G  +F ++ P G    TRDG F
Sbjct: 61  QLPTGLQLGTGVRVVSTFKGFDQGSQQQTGRALDVMVNGRGFFEVQMPDGTSAYTRDGTF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165
           ++   G +V+ SG      +                           + I  + L     
Sbjct: 121 QINAQGEVVTNSGYPLQPGIQVPEGAQSLTIGNDGTISVTLAGQAAAQEIGALTLTDFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   +  +         P ++ +       T  +G LE SN N++ E+  MI   + +
Sbjct: 181 PSGLQAKGENLFVETTASGPAQNGTPGLNGLGTTVQGALEGSNVNTVEELVSMIETQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
                 I   +  +     N+
Sbjct: 241 EMNAKAISTTDSMLGYLNNNV 261


>gi|226225711|ref|YP_002759817.1| flagellar basal-body rod protein FlgG [Gemmatimonas aurantiaca
           T-27]
 gi|226088902|dbj|BAH37347.1| flagellar basal-body rod protein FlgG [Gemmatimonas aurantiaca
           T-27]
          Length = 262

 Score =  171 bits (433), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 48/262 (18%), Positives = 91/262 (34%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +        +A + R   +A N++N +T GF+  +  F +++               
Sbjct: 1   MDPALRAAATGMMAQQTRTEVIAHNLANVNTPGFKRSRAHFEDLLYQTVQGQQVLGENDT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q              E G    TG  LD A+EG+ +F ++ P      +RDG  
Sbjct: 61  QITPAIQVGRGTRLAGVQRLHEQGPIEETGRNLDIAIEGEGFFQIQLPSGETAYSRDGSL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           +++D G LV+++G      +                V  +     +   I  + L     
Sbjct: 121 QISDQGVLVTSAGYALQPPVRIPDDASEFTVSATGVVSVRRGNDIQPTEIGRIELARFAN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G +    + ++P                   +++  LE SN   + EM +MI   + +
Sbjct: 181 PSGLLSLGQNLLAPTAASGQPVVGYPNDAGMGRLQQNSLEGSNVEIVQEMVEMIAAMRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNIA 242
              +  I   ++ M +   NIA
Sbjct: 241 EINSKAIKTADE-MGQIANNIA 261


>gi|297182936|gb|ADI19085.1| flagellar basal body rod protein [uncultured delta proteobacterium
           HF0070_15B21]
          Length = 262

 Score =  171 bits (433), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 48/259 (18%), Positives = 92/259 (35%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +         A ++ + T A+N++N +T G++  KV F +++   +           
Sbjct: 1   MMRALYTAATGMAAQQRNIDTTANNLANVNTTGYKKSKVHFQDLLYHNERTAGVPSSVST 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                      V           G+  +TG +LD +++G  +F +  P GI+  +RDG F
Sbjct: 61  QVPVGLHVGHGVKFIGTEKIHTQGNLENTGNDLDLSIDGHGFFQILQPNGIVGYSRDGHF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
            +   G LV+  G     ++      +  +      V          + I ++ L     
Sbjct: 121 NIDGMGRLVTNDGMLLDPEINIPQDTRKIEVGFDGTVTVFLRDETMPEAIGSIQLARFQN 180

Query: 166 SQGFVRRENSGISP-----NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +         N         S  T+ +GFLE SN + + EM  MI   + +
Sbjct: 181 PAGLTPLGKNLYVSTPASGNAIVDAPGASSMGTLTQGFLERSNVSLVEEMVNMITSQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  I   ++ +     
Sbjct: 241 EVNSKAIQSADEMLKNTNN 259


>gi|224370760|ref|YP_002604924.1| flagellar basal body rod protein FlgG [Desulfobacterium
           autotrophicum HRM2]
 gi|223693477|gb|ACN16760.1| FlgG2 [Desulfobacterium autotrophicum HRM2]
          Length = 260

 Score =  171 bits (433), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 82/253 (32%), Gaps = 18/253 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +         A + +   VA+N++N+ T GF+  +  F +++               
Sbjct: 1   MIRALWTSATGMNAQQIQTDVVANNLANSSTAGFKKSRANFQDLMYQTMLVAGATTPGGG 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107
                 Q    V           G +  TG ELDF ++GD +F +      + TR G F 
Sbjct: 61  QIPTGIQVGMGVRPSGVQKIFTQGDYSQTGNELDFVIQGDGFFRVLHGDEELYTRAGNFT 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           +  +G + + SG     +++          +                   + L S     
Sbjct: 121 LDSEGFITTNSGDRLQPEISIPVEATLISLQDNGTLTVTGADDTILATEQVNLSSFVNPA 180

Query: 168 GFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222
           G      +         P  +         TV   FLE SN + + EM  MI   + + +
Sbjct: 181 GLFAVGENLFRQTEGSGPATEGIPGDAPLGTVANNFLEMSNVSVVEEMVNMIVGQRAYEA 240

Query: 223 ITTLIDENEKSML 235
            +  I   +  + 
Sbjct: 241 NSKSIQTADTMLG 253


>gi|238796906|ref|ZP_04640410.1| Flagellar basal-body rod protein flgG [Yersinia mollaretii ATCC
           43969]
 gi|238719166|gb|EEQ10978.1| Flagellar basal-body rod protein flgG [Yersinia mollaretii ATCC
           43969]
          Length = 260

 Score =  171 bits (432), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 86/259 (33%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A +  +  +++N++N  T GF+  +  F +++               
Sbjct: 1   MIRSLWIAKTGLEAQQTNMDVISNNLANVSTNGFKRQRAVFEDLLYQTLRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+   T    D A++G  +F ++        +RDG F
Sbjct: 61  TIPTGLQLGTGVRPVATERIHSQGNLTQTNNSKDLAIQGHGFFQVQMADGTTAYSRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +   +G LV++SG      +                V          + +  + + +   
Sbjct: 121 QFDQNGQLVTSSGYPVQPAITIPQDADTLTVGNDGIVSVTVPGQTAPQQVGQLTVSTFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +            +       G T+K+G++E SN N   E+  MI   + +
Sbjct: 181 DSGLESIGENLYRETQSSGAPNETTPGLNGGGTLKQGYIETSNVNVAEELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ +    +
Sbjct: 241 EINSKAVSTSDQMLQRLTQ 259


>gi|152980126|ref|YP_001353113.1| FlgG flagellar basal body rod protein [Janthinobacterium sp.
           Marseille]
 gi|151280203|gb|ABR88613.1| FlgG flagellar basal body rod protein [Janthinobacterium sp.
           Marseille]
          Length = 260

 Score =  171 bits (432), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 87/259 (33%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A + ++  +++N++N  T GF+  +  F +++               
Sbjct: 1   MIRSLWIAKTGLDAQQTQMDVISNNLANVSTSGFKRSRAVFEDLLYQNIRQPGAASSQQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+   T    D A+ GD +F +  P      TRDG F
Sbjct: 61  QLPSGLQIGTGVRPVATERIHTQGNLQLTSNSKDMAILGDGFFQVLMPDGTTAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +  + G +V++SG      +                V      +     +  + + +   
Sbjct: 121 QTDNQGQMVTSSGFPIQPAIVIPANATAISISRDGIVSVTVPGTTAQTEVGALQVATFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   +  +              +  T     V++ ++E SN N + EM  MI   + +
Sbjct: 181 PAGLESKGENLYVETTASGNPTTNNPGTNGAGYVQQNYVETSNVNVVEEMVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  I  +++ +    +
Sbjct: 241 EINSKAISTSDQMLQRLTQ 259


>gi|322832566|ref|YP_004212593.1| flagellar basal-body rod protein FlgG [Rahnella sp. Y9602]
 gi|321167767|gb|ADW73466.1| flagellar basal-body rod protein FlgG [Rahnella sp. Y9602]
          Length = 260

 Score =  171 bits (432), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 92/259 (35%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A +  +  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MIPSLYIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTVRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+   T    D A++G+ +F ++ P      TRDG F
Sbjct: 61  NLPSGLQIGTGVRPVSTERLFSQGNLSQTSNSKDIAVKGEGFFQVQLPDGTTAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQI-PQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V  +G LV++SG   +  +      +         V    +     + +  + L +   
Sbjct: 121 QVDQNGQLVTSSGYQVIPAITVPANALSMTVGRDGIVSVTTQGQTAAQQVGQLTLSTFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
           + G      +            + +        + +G++E SN N   E+  MI   + +
Sbjct: 181 NSGLESLGENLYQETQSSGAPTESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ + +  +
Sbjct: 241 EINSKAVSTSDEMLQKLSQ 259


>gi|163758015|ref|ZP_02165103.1| flagellar basal-body rod protein [Hoeflea phototrophica DFL-43]
 gi|162284304|gb|EDQ34587.1| flagellar basal-body rod protein [Hoeflea phototrophica DFL-43]
          Length = 262

 Score =  171 bits (432), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 45/262 (17%), Positives = 93/262 (35%), Gaps = 21/262 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             +  I      A +  L  +A+N++N +T GF+  + +F++++  ++ +          
Sbjct: 1   MKALAIAATGMNAQQLNLEVIANNVANINTTGFKRARAEFADLLYQVERNQGVPNASNQA 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                      V +         GS + T  + D AL G  WF +E+P G    TR G F
Sbjct: 61  IVPEGAHIGLGVQTSAVRNLHIQGSLVGTSNKFDLALVGRGWFQIETPDGETNYTRAGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE-KGEISQKGKVIATMGLYSVDM 165
               DG LV+  G   V  +                   +     + + +  + L +   
Sbjct: 121 NTNADGELVTIDGYTVVPGIVFPDEASEVVISRTGQVFARIGNEAEMQELGQLTLANFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++         P             +++G+LE SN + + E+  +I   + +
Sbjct: 181 EAGLEPLGDNLFRETTASGPANVGVPDDPGFAHIQQGYLEGSNVDPIKEITDLISAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNIA 242
              + +I   ++      +N+ 
Sbjct: 241 EMNSKIIQAADEMASTVSKNLR 262


>gi|15887904|ref|NP_353585.1| flagellar basal body rod protein FlgF [Agrobacterium tumefaciens
           str. C58]
 gi|2459708|gb|AAB71784.1| FlgF [Agrobacterium tumefaciens]
 gi|15155496|gb|AAK86370.1| flagellar basal body rod protein [Agrobacterium tumefaciens str.
           C58]
          Length = 244

 Score =  171 bits (432), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 104/242 (42%), Positives = 159/242 (65%), Gaps = 1/242 (0%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           MQ+   + L++Q+ALE+RL+T++DNM+N +TVGFR  +VKF E+V    ND++ K++FV+
Sbjct: 1   MQSGLYVALSSQIALERRLTTISDNMANVNTVGFRGSEVKFDEMVAKNHNDMNAKVAFVS 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
            G +YLS   G+F  TG   DFA++GDAWFAL++P G ILTRDGRF +  DG+L+S+SG 
Sbjct: 61  QGNDYLSTRQGAFEQTGNSFDFAIKGDAWFALDTPDGQILTRDGRFTMRPDGALISSSGY 120

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
            PVLD    PI++        VG  G I Q   + A++G++  D S+GF+R  NSG+ P 
Sbjct: 121 -PVLDAGGGPIRLNPNGGPITVGLDGAIRQNDTIAASLGIFQADFSKGFLRHPNSGVKPV 179

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
             P P+ +   V V +G+LE SN N + +M Q+I + + F SI++++ + E +  E I+ 
Sbjct: 180 AQPVPVVNNHEVGVVQGYLEQSNVNGISQMTQLIQVNRAFESISSMMRDTESTFGEGIKT 239

Query: 241 IA 242
           + 
Sbjct: 240 LG 241


>gi|190574261|ref|YP_001972106.1| flagellar basal body rod protein FlgG [Stenotrophomonas maltophilia
           K279a]
 gi|194365678|ref|YP_002028288.1| flagellar basal body rod protein FlgG [Stenotrophomonas maltophilia
           R551-3]
 gi|190012183|emb|CAQ45806.1| putative flagellar basal-body rod protein [Stenotrophomonas
           maltophilia K279a]
 gi|194348482|gb|ACF51605.1| flagellar basal-body rod protein FlgG [Stenotrophomonas maltophilia
           R551-3]
          Length = 261

 Score =  171 bits (432), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 52/261 (19%), Positives = 89/261 (34%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  I      A + R+S V++N++NT+T GF+  +  F +++               
Sbjct: 1   MNQALWIAKTGLDAQQMRMSVVSNNLANTNTTGFKQDRASFEDLLYQQVRQPGGSSSAQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V       + E G    TG  LD  + G  +F ++ P      TRDG F
Sbjct: 61  QLPTGLQLGTGVRVVATAKNFEQGGQQQTGRALDVMVNGRGFFEVQMPDGSSAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           K+  D  LV+ SG      +                +  K         +  + L     
Sbjct: 121 KINQDSELVTNSGYPVQPGIQIPEGAQSVTIGTDGTISVKMADGAASVEVGALTLTDFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   R  +         P ++ +       TV +G LE SN N + E+  MI   + +
Sbjct: 181 PAGLQARGENLFLETTASGPAQNGNPGLNGLGTVVQGALEGSNVNVVEELVSMIETQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
                 I   +  +      +
Sbjct: 241 EMNAKAISTTDSMLGYLNNKL 261


>gi|121607559|ref|YP_995366.1| flagellar basal-body rod protein FlgG [Verminephrobacter eiseniae
           EF01-2]
 gi|121552199|gb|ABM56348.1| flagellar basal-body rod protein FlgG [Verminephrobacter eiseniae
           EF01-2]
          Length = 260

 Score =  171 bits (432), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 49/259 (18%), Positives = 94/259 (36%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  I      A + +L  +A N++N  T G++     F +++      +        
Sbjct: 1   MIDALWIAKTGMSAQQTQLDVIAHNLANVSTTGYKRSNAMFEDLIYQNLRQVGANSTEQN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                 Q    V +         GS   +   LD A+ G+ +F +  P G +  TRDG F
Sbjct: 61  QLPTGLQLGLGVRTVATSRCFVQGSLQESRNNLDVAINGNGFFQVMLPDGSLGYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFN-VGEKGEISQKGKVIATMGLYSVDM 165
           +V   G LV+A+G      +      I         V      S + + +  + + S   
Sbjct: 121 QVDAQGRLVTANGLPVANGITIAANAISVSISAEGAVSAIMPGSVQPQPLGNLAMASFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +    +      +     +     +K+GFLE SN N + E+  MI   + +
Sbjct: 181 PAGLEPIGQNLFKESAASGQPQQGIPGSNGLGVIKQGFLEASNINIVEELVTMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  I  +++ + +  +
Sbjct: 241 EMNSKAIQTSDQMLAKLSQ 259


>gi|238788317|ref|ZP_04632111.1| Flagellar basal-body rod protein flgG [Yersinia frederiksenii ATCC
           33641]
 gi|238723563|gb|EEQ15209.1| Flagellar basal-body rod protein flgG [Yersinia frederiksenii ATCC
           33641]
          Length = 260

 Score =  171 bits (432), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 91/259 (35%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A +  +  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTMRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           G+   T    D A++G+ +F ++ P G    TRDG F
Sbjct: 61  TLPSGLQIGTGVRPVATERLHSQGNLSKTDNSKDIAIKGEGFFQVQMPDGTNAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQI-PQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V  +G LV++ G      +      +         V    +     + +  + L +   
Sbjct: 121 QVDQNGQLVTSGGFQIQPAITIPANALSMTVGRDGIVSVTLQGQTATQQVGQLTLTTFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
           + G      +            D +        + +G++E SN N   E+  MI   + +
Sbjct: 181 NSGLESVGENLYQETASSGAPNDSTPGLNGAGLLYQGYVETSNVNVAEELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ + +  +
Sbjct: 241 EINSKAVSTSDQMLQKLTQ 259


>gi|327480022|gb|AEA83332.1| flagellar basal body rod protein FlgG [Pseudomonas stutzeri DSM
           4166]
          Length = 261

 Score =  171 bits (432), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 48/261 (18%), Positives = 99/261 (37%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  +      A +  L+T+++N++N  T GF+  + +F +++  I+           
Sbjct: 1   MLPALWVSKTGLSAQDMNLTTISNNLANVSTTGFKRDRAEFQDLLYQIRRQPGGQSSQDS 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                 Q  + V           GS  +T   LD A+ G  +F +  P G +  TRDG F
Sbjct: 61  ELPSGLQLGTGVRITGTQKIFTTGSLQTTEQPLDMAINGRGFFQVLLPDGTVSYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLD-MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
            ++ DG LV+++G       +     Q     E   V      + + ++I  +       
Sbjct: 121 HLSSDGQLVTSNGYALEPAIVVPPETQTFTVGEDGTVSVTTVGNPQPQIIGNIQTADFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++           +  +       TV +  LE+SN + + E+  MI   + +
Sbjct: 181 PAGLQAMGSNLFLETAASGAPQVSTPGLNGLGTVLQNTLENSNVSVVEELVNMITTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
              + +I   ++ +    + +
Sbjct: 241 EMNSKVISTADQMLSFVTQQL 261


>gi|329898287|ref|ZP_08272370.1| Flagellar basal-body rod protein flgG [gamma proteobacterium
           IMCC3088]
 gi|328920852|gb|EGG28295.1| Flagellar basal-body rod protein flgG [gamma proteobacterium
           IMCC3088]
          Length = 261

 Score =  171 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 53/261 (20%), Positives = 94/261 (36%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S  +      A + R++ +A+N++N +TVGF+  +  F +++               
Sbjct: 1   MDASLWVAKTGLTAQQMRMTVIANNLANVNTVGFKKDRAVFEDLLYQNVRQPGASADAQT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                    +             G+ IST   LD A+ G  +F ++   G    TRDG F
Sbjct: 61  IAPTGLMLGTGTRIIATEKIHRQGNMISTENALDLAIAGRGFFQIQQADGTFAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-IATMGLYSVDM 165
           K+ D G +++ASG+  V  +                 +    +  GKV +  + L     
Sbjct: 121 KLNDQGQVITASGQLMVPAITVPVNSASLTVGRDGTVDAELEAGAGKVTLGQIQLARFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +         P+E           + +G LE SN N + EM  MI   + +
Sbjct: 181 EAGLQSIGRNLYRETTASGPVEVGVPGISGIGELTQGSLEASNVNVVEEMVNMIETQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
              +  I   +  +     N+
Sbjct: 241 EVNSKAISAADGMLRFLNNNL 261


>gi|238785495|ref|ZP_04629478.1| Flagellar basal-body rod protein flgG [Yersinia bercovieri ATCC
           43970]
 gi|238713597|gb|EEQ05626.1| Flagellar basal-body rod protein flgG [Yersinia bercovieri ATCC
           43970]
          Length = 260

 Score =  171 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 92/259 (35%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A +  +  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTMRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           G+   T    D A++G+ +F ++ P G    TRDG F
Sbjct: 61  TLPSGLQIGTGVRPVATERLHSQGNLAKTDNTKDIAIKGEGFFQVQMPDGTNAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQI-PQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V  +G LV+ASG      +      +         V    +     + +  + L +   
Sbjct: 121 QVDQNGQLVTASGFPVQPAITIPANALSMTVGRDGIVSVTLQGQTATQQVGQLTLTTFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
           + G      +            D       G  + +G++E SN N   E+  MI   + +
Sbjct: 181 NSGLESMGENLYQETASSGAPNDTTPGLNGGGLLYQGYVETSNVNVAEELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ + +  +
Sbjct: 241 EINSKAVSTSDQMLQKLTQ 259


>gi|238758108|ref|ZP_04619288.1| Flagellar basal-body rod protein flgG [Yersinia aldovae ATCC 35236]
 gi|238703646|gb|EEP96183.1| Flagellar basal-body rod protein flgG [Yersinia aldovae ATCC 35236]
          Length = 260

 Score =  171 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 90/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A +  +  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MIPSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTMRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           G+   T    D A++G+ +F ++ P G    TRDG F
Sbjct: 61  TLPSGLQIGTGVRPVATERLHSQGNLSKTDNSKDIAIKGEGFFQVQMPDGTNAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V  +G LV++ G      +      +         V          + +  + L +   
Sbjct: 121 QVDQNGQLVTSGGFQIQPAITIPANALKMTVGRDGIVSVTLPGQTATQQVGQLTLTTFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
           + G      +            +       G  + +G++E SN N   E+  MI   + +
Sbjct: 181 NSGLESVGENLYQETASSGAPNETTPGLNGGGLLYQGYVETSNVNVAEELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ + +  +
Sbjct: 241 EINSKAVSTSDQMLQKLTQ 259


>gi|329901232|ref|ZP_08272757.1| Flagellar basal-body rod protein flgG [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327549164|gb|EGF33756.1| Flagellar basal-body rod protein flgG [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 260

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 90/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A + ++  +++N++N  T GF+  +  F +++               
Sbjct: 1   MIRSLWISKTGLEAQQTQMDVISNNLANVSTSGFKRSRAVFEDLLYQTLRQPGAQSSQQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+   T  + D A++G  +F +  P      TRDG F
Sbjct: 61  QLPSGLQLGTGVRPVATERIFTQGNLQQTSNDKDVAIQGQGFFQVLLPDGTTAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           ++   G +V++SG      +                +    + +     I  + L +   
Sbjct: 121 QIDSQGQMVTSSGFVIQPAITIPAAAQSLTVGRDGTISITLQGTAAATQIGALQLATFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   +  +              +  T     + +G++E SN + + E+  MI   + +
Sbjct: 181 PAGLESKGENLYVETGASGTANTNTPGTNGAGILSQGYVETSNVSVVEELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  I  +++ + +  +
Sbjct: 241 EINSKAISTSDQMLAKLSQ 259


>gi|204930805|ref|ZP_03221678.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|204320264|gb|EDZ05468.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
          Length = 260

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 88/259 (33%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M +S  I      A +  +  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           G+   T    D A++G  +F +  P G    TRDG F
Sbjct: 61  TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVILPDGTSAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V  +G LV+A G      +      +         V    +       +  + L +   
Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +            + +        + +G++E SN N   E+  MI + + +
Sbjct: 181 DTGLESIGENLYIETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +   ++ + +  +
Sbjct: 241 EINSKAVSTTDQMLQKLTQ 259


>gi|91794993|ref|YP_564644.1| flagellar basal-body rod FlgG [Shewanella denitrificans OS217]
 gi|91716995|gb|ABE56921.1| Flagellar basal-body rod FlgG [Shewanella denitrificans OS217]
          Length = 261

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 47/261 (18%), Positives = 105/261 (40%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           MQ++  +      A + +++T+A+N++N +T GF+  +V F+++   ++           
Sbjct: 1   MQSALWVSKTGLAAQDTKMTTIANNLANVNTTGFKRDRVAFNDLFYQVQRQPGGQVDELN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  +             G   +T  +LD A+EG+ +F +E P   +  TRDG+F
Sbjct: 61  QLPSGLQLGTGTRVAGTQKVFTTGDVHNTSQQLDLAIEGNGFFQVEEPNGDLAYTRDGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
             + +G +V++ G   V ++                V        + + +  + L +   
Sbjct: 121 YRSSEGMMVTSQGLPLVPNIVIPEDSTNITIATDGIVMATIAGDAEPQELGQITLINFTN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   R N+            +      +   +++G LE SN N + EM +MI   + +
Sbjct: 181 PAGLEARGNNLYRETAASGVAVEGVAGDQALGGLRQGSLEGSNVNVVEEMVEMISTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
                ++  ++  +    +++
Sbjct: 241 EMNAKVVSASDDMLKFLNQSV 261


>gi|51596013|ref|YP_070204.1| flagellar basal body rod protein FlgG [Yersinia pseudotuberculosis
           IP 32953]
 gi|153947499|ref|YP_001401288.1| flagellar basal body rod protein FlgG [Yersinia pseudotuberculosis
           IP 31758]
 gi|170024645|ref|YP_001721150.1| flagellar basal body rod protein FlgG [Yersinia pseudotuberculosis
           YPIII]
 gi|51589295|emb|CAH20916.1| flagellar basal-body rod protein FlgG (distal rod protein)
           [Yersinia pseudotuberculosis IP 32953]
 gi|152958994|gb|ABS46455.1| flagellar basal-body rod protein FlgG [Yersinia pseudotuberculosis
           IP 31758]
 gi|169751179|gb|ACA68697.1| flagellar basal-body rod protein FlgG [Yersinia pseudotuberculosis
           YPIII]
          Length = 260

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 91/259 (35%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A +  +  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTLRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           G+   T    D A++G+ +F ++ P G    TRDG F
Sbjct: 61  TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDIAIKGEGFFQVQMPDGTNAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQI-PQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V  +G LV+A G      +      +         V    +     + +  + L +   
Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANALSMTVGRDGIVSVTLQGQTATQQVGQLTLTTFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
           + G      +            +       G  + +G++E SN N   E+  MI   + +
Sbjct: 181 NSGLESVGENLYQETASSGAPNETTPGLNGGGLLYQGYVETSNVNVAEELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ + +  +
Sbjct: 241 EINSKAVSTSDQMLQKLAQ 259


>gi|126668560|ref|ZP_01739514.1| Flagellar basal body rod protein [Marinobacter sp. ELB17]
 gi|126626965|gb|EAZ97608.1| Flagellar basal body rod protein [Marinobacter sp. ELB17]
          Length = 262

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 44/262 (16%), Positives = 93/262 (35%), Gaps = 20/262 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  +      A +  +ST+++N++N +T GF+  +  F +++  +K           
Sbjct: 1   MNPALWVSKTGLSAQDTNMSTISNNLANVNTTGFKRDRAVFQDLLYQVKRQPGGLNTQNT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+   T   LD A+ G  +  ++ P      TRDG+F
Sbjct: 61  ELPSGLQLGTGVRVVGTVKQFTQGNLQITEQPLDMAVNGRGFLQVQLPDGQTAYTRDGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           ++  DG +V+ SG     ++                V    +       +  + L     
Sbjct: 121 QLNSDGDVVNPSGYALEPNINIPENATNVTIGRDGTVTAVTDDQAAPINLGQITLVDFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
            QG     N+            +         ++++G +E SN   + E+  MI   + +
Sbjct: 181 PQGLQAIGNNLFKQTNASGDPTEGEPGLAGLGSLEQGSIESSNVEVVEELVNMITTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNIA 242
              + ++   ++ +     NI 
Sbjct: 241 EMNSKVVSTVDQMLQFITNNIG 262


>gi|322421662|ref|YP_004200885.1| flagellar basal-body rod protein FlgG [Geobacter sp. M18]
 gi|320128049|gb|ADW15609.1| flagellar basal-body rod protein FlgG [Geobacter sp. M18]
          Length = 262

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 46/258 (17%), Positives = 92/258 (35%), Gaps = 20/258 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +     +   A +  +  VA+N++N+ T GF+  +  F +++   +           
Sbjct: 1   MIRALWTAASGMQAQQLNIDVVANNLANSSTTGFKKSRADFQDLMYQTEKTTGAPATNAT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106
                 Q    V  G        G+ + TG ELD A++GD +  ++        TR G  
Sbjct: 61  TVPTGIQVGLGVRPGAVAKVFTTGTIVHTGNELDLAIQGDGFLQVQQSDGSTAYTRAGSL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           K    G +V++ G+  + ++                V  +         + T+ L S   
Sbjct: 121 KKDGQGRVVTSDGQPVIPEVLIPSNATSVSIGTDGTVSVQQAGQTAATTVGTIQLASFTN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +   P                  ++++G++E SN + M EM  MI   + +
Sbjct: 181 PSGLNAIGKNLFLPTDSSGAATTGTAGQNGLGSLEQGYIEQSNVSVMEEMVSMIVSQRAY 240

Query: 221 NSITTLIDENEKSMLEAI 238
              +  I  ++  + +A 
Sbjct: 241 EINSKAIQASDDMLQQAA 258


>gi|295696121|ref|YP_003589359.1| fagellar hook-basal body protein [Bacillus tusciae DSM 2912]
 gi|295411723|gb|ADG06215.1| fagellar hook-basal body protein [Bacillus tusciae DSM 2912]
          Length = 265

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 50/263 (19%), Positives = 103/263 (39%), Gaps = 25/263 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S    ++     + ++  + +N++N +TVGF+  +V F +++               
Sbjct: 1   MMRSLYSAVSGMRGFQTKMDVIGNNIANVNTVGFKASRVMFHDLISQTLSGATAPGDTTG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF--ALESPRGIILTRDGRF 106
            ++  Q    V           G+ + TG   D A++G+ +F   L        TR G F
Sbjct: 61  GSNPQQVGLGVGLASIDTPMTPGAPMMTGVPTDLAIDGNGFFVVQLSDGATQAYTRAGNF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ-----KGKVIATMGLY 161
            +  + +LV++ G +  LD    PIQ+P   +  ++ + G ++        +  A +GL 
Sbjct: 121 HIDSNRNLVTSEGLFV-LDTGGAPIQLPDNTKSVSIDKNGNVNCLLDDGTTQTAAQIGLA 179

Query: 162 SVDMSQGFVRRENSGISP-----NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
           +    +G  +  N+                      ++  G LE SN +   E  +MI  
Sbjct: 180 NFANPEGLQKIGNNLFVETTNSGTADVQAPNQGVFGSITSGALEMSNVDLTNEFTEMIIA 239

Query: 217 TQKFNSITTLIDENEKSMLEAIR 239
            + F +    I  +++ + E + 
Sbjct: 240 QRAFQANARTITSDDQMLQEVVN 262


>gi|146281773|ref|YP_001171926.1| flagellar basal body rod protein FlgG [Pseudomonas stutzeri A1501]
 gi|145569978|gb|ABP79084.1| flagellar basal-body rod protein FlgG [Pseudomonas stutzeri A1501]
          Length = 261

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 47/261 (18%), Positives = 98/261 (37%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  +      A +  L+T+++N++N  T GF+  + +F +++  I+           
Sbjct: 1   MLPALWVSKTGLSAQDMNLTTISNNLANVSTTGFKRDRAEFQDLLYQIRRQPGGQSSQDS 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                 Q  + V           GS  +T   LD A+ G  +F +  P G +  TRDG F
Sbjct: 61  ELPSGLQLGTGVRVTGTQKIFTTGSLQTTEQPLDMAINGRGFFQVLLPDGTVSYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASV-PIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
            +  DG +V+++G      +      Q     E   V      + + ++I  +       
Sbjct: 121 HLDSDGQVVTSNGYALEPAIVVPAETQTFTVGEDGTVSVTTLGNAQPQIIGNIQTADFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++           +  +       TV +  LE+SN + + E+  MI   + +
Sbjct: 181 PAGLQAMGSNLFLETAASGAPQVSTPGLNGLGTVLQNTLENSNVSVVEELVNMITTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
              + +I   ++ +    + +
Sbjct: 241 EMNSKVISTADQMLSFVTQQL 261


>gi|317492426|ref|ZP_07950855.1| flagellar basal-body rod protein FlgG [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316919765|gb|EFV41095.1| flagellar basal-body rod protein FlgG [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 260

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 88/259 (33%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A +  +  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MIRSLYIAKTGLEAQQTNMDVIANNLANVSTNGFKRQRAVFEDLMYQTLRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           G+   T    D A++G  +F ++ P G    TRDG F
Sbjct: 61  TLPSGLQIGTGVRPVATERLHSQGNLSQTDNSRDVAIKGQGFFQVQQPDGTLAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V  +G LV++SG   V  +                V    +       +  + L +   
Sbjct: 121 QVDQNGQLVTSSGFQVVPAITIPANATKLTIGRDGIVSVNQQGQTATTQVGQLTLTTFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +            + +        + +G++E SN N   E+  MI   + +
Sbjct: 181 DAGLESVGENLYQETESSGAPTESTPGLNGAGMLYQGYVETSNVNVAEELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ +    +
Sbjct: 241 EINSKAVTTSDQMLQRLTQ 259


>gi|270262399|ref|ZP_06190670.1| flagellar basal-body rod protein FlgG [Serratia odorifera 4Rx13]
 gi|270043083|gb|EFA16176.1| flagellar basal-body rod protein FlgG [Serratia odorifera 4Rx13]
          Length = 260

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 88/259 (33%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A +  +  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MIPSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTMRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+   T    D A++G  +F +  P      TRDG F
Sbjct: 61  TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGSQAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           ++  +G LV+ASG      +      +         V    +     + +  + L +   
Sbjct: 121 QIDQNGQLVTASGFQVQPAITIPANALSITVGRDGIVSVTQQGQTAAQQVGQLTLTTFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +            + +        + +G++E SN N   E+  MI   + +
Sbjct: 181 DSGLESVGENLYQETESSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ + +  +
Sbjct: 241 EINSKAVSTSDQMLQKLTQ 259


>gi|238751764|ref|ZP_04613252.1| Flagellar basal-body rod protein flgG [Yersinia rohdei ATCC 43380]
 gi|238710035|gb|EEQ02265.1| Flagellar basal-body rod protein flgG [Yersinia rohdei ATCC 43380]
          Length = 260

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 91/259 (35%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A +  +  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTMRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           G+   T    D A++G+ +F ++ P G    TRDG F
Sbjct: 61  TLPSGLQIGTGVRPVATERLHSQGNLSKTDNSKDIAIKGEGFFQVQMPDGTNAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQI-PQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V  +G LV++ G      +      +         V    +     + +  + L +   
Sbjct: 121 QVDQNGQLVTSGGFQVQPAITIPANALSMTVGRDGIVSVTLQGQTATQQVGQLTLTTFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
           + G      +            +       G  + +G++E SN N   E+  MI   + +
Sbjct: 181 NSGLESMGENLYQETASSGAPNETTPGLNGGGLLYQGYVETSNVNVAEELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ + +  +
Sbjct: 241 EINSKAVSTSDQMLQKLTQ 259


>gi|307823533|ref|ZP_07653762.1| flagellar basal-body rod protein FlgG [Methylobacter tundripaludum
           SV96]
 gi|307735518|gb|EFO06366.1| flagellar basal-body rod protein FlgG [Methylobacter tundripaludum
           SV96]
          Length = 262

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 40/260 (15%), Positives = 87/260 (33%), Gaps = 20/260 (7%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
           + +  +  +   A + R++ +++N++N +T GF+  +  F +++      +         
Sbjct: 3   ERALWVAKSGLDAQQTRMAVISNNLANVNTTGFKRGRAVFEDLMYQNIRQVGAQSTQNTQ 62

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFK 107
                Q  + V +         G+   T   LD A+ G  +  +  P      TRDG  K
Sbjct: 63  LPTGLQLGTGVRTVATEKLHTQGNVQPTENALDVAINGRGFLQILMPNGDTNYTRDGSLK 122

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDMS 166
           +   G LV++ G      +      +         V           V+  +   +    
Sbjct: 123 LDATGQLVTSGGLTLNPAITVPQDALSVTIGTDGTVSALQPGVAAPTVLGQIQTANFINP 182

Query: 167 QGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221
            G      +    +                 T+ +G LE SN N + E+  MI   + + 
Sbjct: 183 TGLEAVGENLYRESAASGAPIVGTPGQAEYGTLTQGSLETSNVNVVEELVNMIETQRAYE 242

Query: 222 SITTLIDENEKSMLEAIRNI 241
             +  I   ++ +    + +
Sbjct: 243 MNSKAISTTDQMLSFVTQQL 262


>gi|197120123|ref|YP_002140550.1| flagellar basal body rod protein FlgG [Geobacter bemidjiensis Bem]
 gi|197089483|gb|ACH40754.1| flagellar basal body rod protein FlgG [Geobacter bemidjiensis Bem]
          Length = 262

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 51/258 (19%), Positives = 95/258 (36%), Gaps = 20/258 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +     +   A +  +  VA+N++N  T GF+  +  F +++   +           
Sbjct: 1   MIRALWTAASGMQAQQLNIDVVANNLANAATTGFKKSRADFQDLMYQTEKTTGAPATNAT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106
                 Q    V  G        G+ I+TG ELD A++GD +  ++        TR G F
Sbjct: 61  TIPTGIQVGLGVRPGAVTKVFTTGNIIATGNELDLAIQGDGFLQVQQSDGSTAYTRAGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           K    G +V++ G+  + ++                V  +         + T+ L S   
Sbjct: 121 KRDGQGRVVTSDGQPVIPEVLIPSNATRVTVGTDGTVSVQQAGQTAATTVGTLQLASFSN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +   P                  T+++GFLE+SN + M EM  MI   + +
Sbjct: 181 PAGLNAIGKNLFLPTDSSGAATTGTAGQNGLGTIEQGFLENSNVSIMEEMVSMIVGQRAY 240

Query: 221 NSITTLIDENEKSMLEAI 238
              +  I  +++ + +A 
Sbjct: 241 EINSKAIQASDEMLQQAA 258


>gi|186895116|ref|YP_001872228.1| flagellar basal body rod protein FlgG [Yersinia pseudotuberculosis
           PB1/+]
 gi|186698142|gb|ACC88771.1| flagellar basal-body rod protein FlgG [Yersinia pseudotuberculosis
           PB1/+]
          Length = 260

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 90/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A +  +  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTLRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           G+   T    D A++G+ +F ++ P G    TRDG F
Sbjct: 61  TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDIAIKGEGFFQVQMPDGTNAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQI-PQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V  +G LV+A G      +      +         V    +     + +  + L     
Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANALSMTVGRDGIVSVTLQGQTATQQVGQLTLTIFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
           + G      +            +       G  + +G++E SN N   E+  MI   + +
Sbjct: 181 NSGLESVGENLYQETASSGAPNETTPGLNGGGLLYQGYVETSNVNVAEELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ + +  +
Sbjct: 241 EINSKAVSTSDQMLQKLAQ 259


>gi|254458078|ref|ZP_05071505.1| flagellar basal-body rod protein FlgG [Campylobacterales bacterium
           GD 1]
 gi|207085471|gb|EDZ62756.1| flagellar basal-body rod protein FlgG [Campylobacterales bacterium
           GD 1]
          Length = 262

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 48/259 (18%), Positives = 99/259 (38%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ------ 54
           M  S        L ++ ++ T A+N++N +T+GF+  + +FS+++  + +          
Sbjct: 1   MMQSLYTASTGMLGMQTQIDTTANNIANVNTIGFKKSRAEFSDLMYKVMSYAGTATSDVT 60

Query: 55  -------KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                      V           GS   T  +LD A+ G  +F LE P    + +R+G F
Sbjct: 61  KSPTGIEVGLGVRPTAINKIFSEGSLKQTDNQLDVAITGRGFFKLELPDGTEVYSRNGAF 120

Query: 107 KVTDDGSLVSASGKY-PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           KV D+GS+V++ G       +               V        +   I  + L +   
Sbjct: 121 KVDDNGSMVNSDGYKLVPEIVIPPDATDISIGTDGTVTVVQPGQTQATQIGQITLTNFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   R ++            + +        +++GF+E SN   + E+  +I   + +
Sbjct: 181 PAGLHSRGDNLYLETDSSGQPVEGTPGVDGLGVLRQGFVELSNVELVVELTDLITGQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
           +S + +I  +++ +     
Sbjct: 241 DSNSKVITTSDEMLQTTNN 259


>gi|256830177|ref|YP_003158905.1| flagellar basal-body rod protein FlgF [Desulfomicrobium baculatum
           DSM 4028]
 gi|256579353|gb|ACU90489.1| flagellar basal-body rod protein FlgF [Desulfomicrobium baculatum
           DSM 4028]
          Length = 258

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 60/259 (23%), Positives = 108/259 (41%), Gaps = 19/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           MQ S    +   L  + RL ++A+N++N +T GF++ K+ F +      +D+    + + 
Sbjct: 1   MQDSSYSAVFGALTQQHRLDSIANNLANVNTTGFKSEKLAFRDTFRRYAHDMVDPNTTLT 60

Query: 61  SGKEYLS---------------KEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGR 105
               +                    G   STG  LD A+ GD +F +++P G  +TR G 
Sbjct: 61  DKVPWPQANLLAQPRISEAVIDMSQGPMKSTGNPLDLAIAGDGFFRVQTPEGEFMTRQGV 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           + ++ +G +V A G   +            +     V   G  S  G++I T+ L  V+ 
Sbjct: 121 YHLSAEGFVVDAHGNQLLGAGG---PLQVPEGGAVLVDADGGFSVNGELIDTIELVRVED 177

Query: 166 SQGFVRRENSG-ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224
            +   +  NS                  TV++GFLE +N N + EM  MI   + F +  
Sbjct: 178 PRALEKVGNSLLRIRPGADAQAIPAEDSTVEQGFLEAANVNVVSEMVNMIEAMRAFEAYQ 237

Query: 225 TLIDENEKSMLEAIRNIAS 243
            +I  + +   +AI  + +
Sbjct: 238 KMISGSFEQDKKAIAEVGA 256


>gi|83589631|ref|YP_429640.1| hypothetical protein Moth_0779 [Moorella thermoacetica ATCC 39073]
 gi|83572545|gb|ABC19097.1| conserved hypothetical protein [Moorella thermoacetica ATCC 39073]
          Length = 275

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 48/272 (17%), Positives = 85/272 (31%), Gaps = 33/272 (12%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-------- 52
           M  S   G++     + R+  + DN++N +TVGF+   V F +V                
Sbjct: 1   MMRSLYSGVSGLRTHQTRMDVIGDNIANVNTVGFKRSAVTFKDVFYQTLRGGSAGDSGGT 60

Query: 53  -------DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGR 105
                   Q    V  G   +    G+  STG   D  ++GD +F +        TR G 
Sbjct: 61  GMGGTNPQQIGLGVTLGSIDVVHTQGAAASTGNGTDLMIQGDGFFRVSDGTNTYYTRAGA 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVG----------EKGEISQKGKVI 155
           F   ++G LV+  G   +    +        D                   + +      
Sbjct: 121 FHFDNEGFLVTTDGLKVLGTDDNPIQIADMNDPTTMPQSYSIDKMGVVHYVDSTGAALQA 180

Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPP--------TPLEDLSGVTVKRGFLEDSNANSM 207
            T+ +       G  +   +                     L+  T+    LE SN +  
Sbjct: 181 GTISIAKFSNPSGLEKIGQNLYRATTSSGDPGSELTPGQGSLANTTIIPSALEMSNVDLA 240

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            E   MI   + F +    I  +++ + E + 
Sbjct: 241 QEFTDMIITERGFQANARTITTSDQMLQELVN 272


>gi|226939372|ref|YP_002794445.1| flgG [Laribacter hongkongensis HLHK9]
 gi|226714298|gb|ACO73436.1| flgG [Laribacter hongkongensis HLHK9]
          Length = 260

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 48/259 (18%), Positives = 88/259 (33%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S  I      + + RL  + +N++N +T GF+  +  F +++         +     
Sbjct: 1   MLRSLYISKTGMDSSQFRLDVITNNLANVNTTGFKKGRAVFEDLMYQTIRQPGAQSSQNT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                    +  A          G+   T   LD A+ G  +F ++ P G I  TRDG F
Sbjct: 61  MLPTGLLVGTGAAPVAVDRQFSPGNLQQTNNALDMAINGRGFFTIQMPDGTIGYTRDGTF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165
           K+ D G LV++ G      +               +         + + I  M L     
Sbjct: 121 KLDDQGQLVTSQGFLVDPQITVPQGAKSISVSKDGIVSVVLPGQTQPQQIGQMQLADFIN 180

Query: 166 SQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
            QG      +                 +     +++ FLE SN N   E+ +MI   + +
Sbjct: 181 PQGLEPIGGNLYLETAASGAPTVANPTNDGTGAIQQTFLEASNVNVTEELVEMIQAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  I  ++  +    +
Sbjct: 241 ELNSRGIKTSDDMLARLSQ 259


>gi|294339841|emb|CAZ88204.1| Flagellar basal-body rod protein flgG (Distal rod protein)
           [Thiomonas sp. 3As]
          Length = 261

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 47/261 (18%), Positives = 91/261 (34%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  +      A + R+  +A+N++N +T GF+  +  F +++               
Sbjct: 1   MIRSLYVAKTGLEAEQTRMDVIANNLANVNTSGFKGSRAVFQDLLYQNLTQPGAQSSQST 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+   TG  LD A+ G  +F +  P   I  TRDG F
Sbjct: 61  QYPSGLQLGTGVRPVSTERLMTQGNLTQTGNSLDVAINGQGFFQVLEPNGTIAYTRDGTF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165
           ++ + G LV+A+G      +                           + +  + L S   
Sbjct: 121 QLNNQGQLVTANGYLVQPTVTIPASAQSVTIGNDGTVSVTLPGQAAPQQVGALQLASFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++                      +V++G+LE SN N + E+  MI   + +
Sbjct: 181 PTGLQSIGDNLYLQTGSSGAPNTGQPTLNGLGSVRQGYLESSNVNVVAELVDMISTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
              +  +  +++ +     N+
Sbjct: 241 EVNSKAVTASDQMLQYVNNNL 261


>gi|15596279|ref|NP_249773.1| flagellar basal body rod protein FlgG [Pseudomonas aeruginosa PAO1]
 gi|107100527|ref|ZP_01364445.1| hypothetical protein PaerPA_01001552 [Pseudomonas aeruginosa PACS2]
 gi|116049011|ref|YP_792187.1| flagellar basal body rod protein FlgG [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|152984786|ref|YP_001349648.1| flagellar basal body rod protein FlgG [Pseudomonas aeruginosa PA7]
 gi|218892954|ref|YP_002441823.1| flagellar basal body rod protein FlgG [Pseudomonas aeruginosa
           LESB58]
 gi|254234218|ref|ZP_04927541.1| flagellar basal-body rod protein FlgG [Pseudomonas aeruginosa
           C3719]
 gi|254239440|ref|ZP_04932762.1| flagellar basal-body rod protein FlgG [Pseudomonas aeruginosa 2192]
 gi|296390554|ref|ZP_06880029.1| flagellar basal body rod protein FlgG [Pseudomonas aeruginosa PAb1]
 gi|313106037|ref|ZP_07792296.1| flagellar basal-body rod protein FlgG [Pseudomonas aeruginosa
           39016]
 gi|9946998|gb|AAG04471.1|AE004539_13 flagellar basal-body rod protein FlgG [Pseudomonas aeruginosa PAO1]
 gi|115584232|gb|ABJ10247.1| flagellar basal-body rod protein FlgG [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126166149|gb|EAZ51660.1| flagellar basal-body rod protein FlgG [Pseudomonas aeruginosa
           C3719]
 gi|126192818|gb|EAZ56881.1| flagellar basal-body rod protein FlgG [Pseudomonas aeruginosa 2192]
 gi|150959944|gb|ABR81969.1| flagellar basal-body rod protein FlgG [Pseudomonas aeruginosa PA7]
 gi|218773182|emb|CAW28994.1| flagellar basal-body rod protein FlgG [Pseudomonas aeruginosa
           LESB58]
 gi|310878798|gb|EFQ37392.1| flagellar basal-body rod protein FlgG [Pseudomonas aeruginosa
           39016]
          Length = 261

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 50/261 (19%), Positives = 100/261 (38%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M ++  +      A +  L+T+++N++N  T GF+  + +F +++  I+           
Sbjct: 1   MLSALWVSKTGLSAQDMNLTTISNNLANVSTTGFKRDRAEFQDLLYQIRRQPGGQSTQDS 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                 Q  + V           GS  +T   LD A+ G  +F +  P G +  TRDG F
Sbjct: 61  ELPSGLQLGTGVRVVGTQKIFTPGSLQTTEQPLDMAVNGRGFFQVLLPDGTVSYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
            +  DG +V+++G      +      Q     +   V      + + +VI  +       
Sbjct: 121 HLNSDGQIVTSNGFALEPAIVVPNETQTFTVGQDGTVSVTTTGNAQPQVIGNIQTADFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     N+           +  +       TV +  LE+SN N + E+  MI   + +
Sbjct: 181 PAGLQAIGNNLFLETGSSGAPQVGTPGLNGLGTVAQNTLENSNVNVVEELVNMITTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
              + +I   ++ +    +N+
Sbjct: 241 EMNSKVISTADQMLSFVTQNL 261


>gi|163856437|ref|YP_001630735.1| flagellar basal body rod protein FlgG [Bordetella petrii DSM 12804]
 gi|163260165|emb|CAP42467.1| flagellar basal-body rod protein FlgG [Bordetella petrii]
          Length = 261

 Score =  170 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 42/260 (16%), Positives = 92/260 (35%), Gaps = 21/260 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I        +  +  +++N++N  T GF+  +  F +++               
Sbjct: 1   MMRSLWIAKTGLEGQQTSMDVISNNLANVQTNGFKRGRAIFQDLMYQTLRQPGAQVGDAN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           G+  +TG+ELD A++G  +  ++ P G    TRDG  
Sbjct: 61  QLPTGLQLGTGVRVASTERVFTQGNLNNTGSELDIAIDGKGFLQVDLPDGTQAYTRDGTL 120

Query: 107 KVTDDGSLVSASGK--YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
           +V  +G L +A G    P +++    + +    +      +   +     I  + L +  
Sbjct: 121 QVDQNGQLTTAGGYVIQPPINVPDNALSLTIGKDGTVSVTQPGAAGLNVQIGQLQLATFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +         P            ++ + ++E SN N   E+  MI   + 
Sbjct: 181 NPPGLQSVGENLYLETDSSGPANILQPGIDGAGSILQQYVETSNVNVAEELVNMITTQRA 240

Query: 220 FNSITTLIDENEKSMLEAIR 239
           +   +  +  +++ +    +
Sbjct: 241 YEMNSKAVKTSDEMLARLTQ 260


>gi|157371205|ref|YP_001479194.1| flagellar basal body rod protein FlgG [Serratia proteamaculans 568]
 gi|157322969|gb|ABV42066.1| flagellar basal-body rod protein FlgG [Serratia proteamaculans 568]
          Length = 260

 Score =  170 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 88/259 (33%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A +  +  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MIPSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTMRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           G+   T    D A++G  +F +  P G    TRDG F
Sbjct: 61  TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDIAIKGQGFFQVMMPDGTLAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +   +G LV+ASG      +      +         V    +     + +  + L +   
Sbjct: 121 QRDQNGQLVTASGFQVQPAIIIPANALSITVGRDGIVSVTQQGQTAAQQVGQLTLTTFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +            + +        + +G++E SN N   E+  MI   + +
Sbjct: 181 DSGLESMGENLYQETESSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ + +  +
Sbjct: 241 EINSKAVSTSDQMLQKLTQ 259


>gi|227112523|ref|ZP_03826179.1| flagellar basal body rod protein FlgG [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 260

 Score =  170 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 89/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A +  +  +++N++N  T GF+  +  F +++               
Sbjct: 1   MIRSLWIAKTGLNAQQTNMDVISNNLANVSTNGFKRQRAVFEDLMYQTVRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+F  TG   D A++G  +F ++ P      TRDG F
Sbjct: 61  MLPSGLQLGTGVRPVSTERIHTQGTFSETGNSKDVAIKGQGFFQVQLPDGTTAYTRDGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIP-QKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           ++  +G LV++SG      +                V  K +       I  + L +   
Sbjct: 121 QLDGNGQLVTSSGYQVQPAITVPANATELNIGRDGIVSVKVQGQAATNQIGQLTLTTFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +            + +        + + ++E SN N   E+  MI   + +
Sbjct: 181 DSGLESIGENLYLETASSGAPNETNPGLNGAGLLYQKYVETSNVNVAEELVSMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  I  +++ + +  +
Sbjct: 241 EINSKAISSSDQMLQKLTQ 259


>gi|225158946|ref|ZP_03725258.1| flagellar basal-body rod protein FlgG [Opitutaceae bacterium TAV2]
 gi|224802441|gb|EEG20701.1| flagellar basal-body rod protein FlgG [Opitutaceae bacterium TAV2]
          Length = 260

 Score =  170 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 48/258 (18%), Positives = 95/258 (36%), Gaps = 20/258 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S         A +  L+T+A+N++N +T GF+  K++F +++     +         
Sbjct: 1   MNLSLYSAATGMEAQQLNLNTIANNLANVNTAGFKRSKIEFHDMLYQSPRNAGAETGNGN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 +  +             G   ++  +LD A++G+ +F ++ P      TRDG F
Sbjct: 61  LLPTGVEIGNGSRISSTAKIFTQGQLTASSEKLDIAIQGEGFFEIQRPDGTTAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           K   +G +V+A G  PVL              I + G+    +  G     + L      
Sbjct: 121 KQDPNGQIVTADG-LPVLSGFQAVPNGTTDITISDTGDVTYTNAAGNETFRLTLTRFANP 179

Query: 167 QGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221
            G      +           E          T ++ ++E SN N + EM  +I   + + 
Sbjct: 180 AGLRSLGGNLYEETPASGTPETGQPGEQGFGTTQQYYIESSNVNIVEEMVNLIVAQRAYE 239

Query: 222 SITTLIDENEKSMLEAIR 239
             +  I  +++ +    +
Sbjct: 240 VSSKAIQTSDEMLQNVTQ 257


>gi|149375032|ref|ZP_01892805.1| Flagellar basal body rod protein [Marinobacter algicola DG893]
 gi|149360921|gb|EDM49372.1| Flagellar basal body rod protein [Marinobacter algicola DG893]
          Length = 262

 Score =  170 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 47/262 (17%), Positives = 95/262 (36%), Gaps = 20/262 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  +      A +  +ST+++N++N +T GF+  +  F +++  I            
Sbjct: 1   MHPALWVSKTGLSAQDTNMSTISNNLANVNTTGFKRDRAVFQDLLYQIDRQPGGLNTQNS 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+   T   LD A+ G  +  +  P   I  TRDG+F
Sbjct: 61  ELPSGLQLGTGVRIVGTAKQFSQGNLEVTEQPLDMAVNGRGFMQILLPDGQIAYTRDGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           ++  +G +V+  G     ++            +   V    +       +  + L     
Sbjct: 121 QLNSNGDIVNPDGYTLEPNINVPENATNITIGKDGTVSAVTDDQAAPVNLGEITLVDFIN 180

Query: 166 SQGFVRRENSGI-SPNIPPTPLE----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
            QG     N+   + N    P E         T+++G +E SN   + E+  MI   + +
Sbjct: 181 PQGLQAIGNNLFKATNASGDPAEGEPGIGGLGTLEQGMVEASNVEVVEELVNMITTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNIA 242
              + ++   ++ +     NI 
Sbjct: 241 EMNSKVVSATDQMLQFITNNIG 262


>gi|138894748|ref|YP_001125201.1| flagellar basal body rod protein FlgG [Geobacillus
           thermodenitrificans NG80-2]
 gi|134266261|gb|ABO66456.1| Flagellar hook protein [Geobacillus thermodenitrificans NG80-2]
          Length = 264

 Score =  170 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 53/263 (20%), Positives = 103/263 (39%), Gaps = 26/263 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G+ A    + +L  + +N++N +T GF+  +  F +++    +          
Sbjct: 1   MLRSMYSGIGAMRNFQTKLDVIGNNIANVNTYGFKKGRTIFQDLMSQTISGASGPSAASG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRF 106
                Q                GS  +TG  LD A+ GD +F     +    + TR G F
Sbjct: 61  GTNPRQVGLGSQLAAIDTIHTQGSLQTTGRVLDLAISGDGFFIVGDANGNNQMYTRAGNF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG-----KVIATMGLY 161
            +  +G +V+A+G Y + D    P+QI    +  ++G  G ++        +++ T+ L 
Sbjct: 121 YLDSEGYIVNANGLYLLGD--GGPLQIDPNAKSLSIGADGNVTIVDDTGNLQLVGTIQLA 178

Query: 162 SVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHL 216
                 G  +  N+     +     +           +  G LE SN +   E  +MI  
Sbjct: 179 KFANPDGLEKEGNNLFRETVNSGDPQIGVPGANGTGKLVSGALEMSNVDLAEEFTEMIVA 238

Query: 217 TQKFNSITTLIDENEKSMLEAIR 239
            + F + T +I  +++ + E + 
Sbjct: 239 QRGFQANTRIITTSDEILQELVN 261


>gi|119477951|ref|ZP_01618051.1| Flagellar basal body rod protein [marine gamma proteobacterium
           HTCC2143]
 gi|119448864|gb|EAW30106.1| Flagellar basal body rod protein [marine gamma proteobacterium
           HTCC2143]
          Length = 261

 Score =  170 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 46/261 (17%), Positives = 97/261 (37%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  I      A + RL+T+++N++N  TVG++   V F +++  I+           
Sbjct: 1   MNQALWISKTGLSAQDTRLATISNNLANAATVGYKRDSVVFEDLLYQIRRQPGAQSSQNT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           GS   T   LD A+ G  +F +  P G    +R+G+F
Sbjct: 61  QLPSGLQVGTGVRVIGTQKEFSDGSVQITEKPLDLAIVGRGFFEILMPDGTSAYSRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           ++  DG +V+A G      +                V  +       + +  + + +   
Sbjct: 121 QINADGEIVNARGLLLQPSITVPDDAQTVSISSDGIVEAQIAGQAAAQTLGNITVTNFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++           +           +++G LE+SN + + E+  MI   + +
Sbjct: 181 PTGLQSIGSNLFIETAASGTPQQGEPGIDGLGRLEQGALENSNVDVVEELVSMITTQRTY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
              + +I   ++ +    +N+
Sbjct: 241 EMNSKVISTADQMLQYISQNL 261


>gi|311280015|ref|YP_003942246.1| flagellar basal-body rod protein FlgG [Enterobacter cloacae SCF1]
 gi|308749210|gb|ADO48962.1| flagellar basal-body rod protein FlgG [Enterobacter cloacae SCF1]
          Length = 260

 Score =  170 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 88/259 (33%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M +S  I      A +  +  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTVRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           G+   T    D A++G  +F +  P G    TRDG F
Sbjct: 61  TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQILLPDGTSAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V  +G LV+A G      +      +         V    +       +  + L +   
Sbjct: 121 QVDQNGQLVTAGGYQVQPAITIPANTLSITIGRDGVVSVTQQGQTNPVQVGQLNLTTFMN 180

Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +  +         D          + +G++E SN N   E+  MI + + +
Sbjct: 181 DAGLESIGENLYTETQASGAPNDTTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +   ++ + +  +
Sbjct: 241 EINSKAVTTTDQMLQKLTQ 259


>gi|196247630|ref|ZP_03146332.1| protein of unknown function DUF1078 domain protein [Geobacillus sp.
           G11MC16]
 gi|196212414|gb|EDY07171.1| protein of unknown function DUF1078 domain protein [Geobacillus sp.
           G11MC16]
          Length = 264

 Score =  170 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 48/261 (18%), Positives = 94/261 (36%), Gaps = 22/261 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G+ A    + +L  + +N++N +T GF+  +  F +++    +          
Sbjct: 1   MLRSMYSGIGAMRNFQTKLDVIGNNIANVNTYGFKKGRTIFQDLMSQTISGASGPSAASG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRF 106
                Q                GS  +TG  LD A+ GD +F     +    + TR G F
Sbjct: 61  GTNPRQVGLGSQLAAIDTIHTQGSLQTTGRVLDLAISGDGFFIVGDANGNNQMYTRAGNF 120

Query: 107 KVTDDGSLVSASGKYPVLDM---ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
            +  +G +V+A+G Y + D                        + +   +++ T+ L   
Sbjct: 121 YLDSEGYIVNANGLYLLGDGGPLKIDSNAKSLSIGADGNVTIVDDTGNLQLVGTIQLAKF 180

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
               G  +  N+     +     +           +  G LE SN +   E  +MI   +
Sbjct: 181 ANPDGLEKEGNNLFRETVNSGDPQIGVPGANGTGKLVSGALEMSNVDLAEEFTEMIVAQR 240

Query: 219 KFNSITTLIDENEKSMLEAIR 239
            F + T +I  +++ + E + 
Sbjct: 241 GFQANTRIITTSDEILQELVN 261


>gi|225620642|ref|YP_002721900.1| flagellar basal body rod protein [Brachyspira hyodysenteriae WA1]
 gi|225215462|gb|ACN84196.1| flagellar basal body rod protein [Brachyspira hyodysenteriae WA1]
          Length = 282

 Score =  170 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 59/280 (21%), Positives = 103/280 (36%), Gaps = 38/280 (13%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS---EVVGAIKND------ 51
           M      G +  +A + RL  VA+N++N D  GF+   V F    E++ A   D      
Sbjct: 1   MVRGVYTGASGMMAEQARLDVVANNLANVDKPGFKRDTVSFKAFPEMMAARTEDDGVVIF 60

Query: 52  ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101
                     + +  + V   + +   E GS   TG +LD AL    +FA+E+P G   T
Sbjct: 61  PLGSTDVRPYVGRMGTGVEVNEVFTEWEQGSLRETGNQLDIALGDKGFFAIETPNGERYT 120

Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF---------------NVGEKG 146
           R+G F +  D  LV+  G   + +   + I+    +                   V    
Sbjct: 121 RNGSFLIDKDHYLVTKHGYKVMGENGYIQIKTNNFNIDEEGRVSINRRYQDGNTFVQFND 180

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV----TVKRGFLEDS 202
              +  +++ T+ +   D  +   +   S         P            V   FLE S
Sbjct: 181 NEWEDEEILDTLKIVRFDNERYLKKEGESFWVDTDISGPAFIAEKGVNRPKVLSRFLEMS 240

Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           N N + EM +MI + + +   +  I  ++  +   I  + 
Sbjct: 241 NVNPINEMVRMIEVQRAYELNSKTISTHDTLVGRVINEVG 280


>gi|253702432|ref|YP_003023621.1| flagellar basal body rod protein FlgG [Geobacter sp. M21]
 gi|251777282|gb|ACT19863.1| flagellar basal-body rod protein FlgG [Geobacter sp. M21]
          Length = 262

 Score =  170 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 50/258 (19%), Positives = 93/258 (36%), Gaps = 20/258 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +     +   A +  +  VA N++N  T GF+  +  F +++   +           
Sbjct: 1   MIRALWTAASGMQAQQLNIDVVAHNLANAATTGFKKSRADFQDLMYQTEKTTGAPATNAT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106
                 Q    V  G        G+ I+TG ELD A++GD +  ++        TR G  
Sbjct: 61  TIPTGIQVGLGVRPGAVTKVFTTGNIIATGNELDLAIQGDGFLQVQQSDGSTAYTRAGAL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           K    G +V++ G+  + ++                V  +         + T+ L S   
Sbjct: 121 KRDGQGRVVTSDGQPVIPEVLIPSNATRVTVGTDGTVSVQQAGQTAATTVGTLQLASFSN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +   P                  T+++GFLE+SN + M EM  MI   + +
Sbjct: 181 PAGLNAIGKNLFLPTDSSGAATTGTAGQNGLGTIEQGFLENSNVSIMEEMVSMIVGQRAY 240

Query: 221 NSITTLIDENEKSMLEAI 238
              +  I  +++ + +A 
Sbjct: 241 EINSKAIQASDEMLQQAA 258


>gi|167628969|ref|YP_001679468.1| flagellar basal-body rod protein flgg, putative [Heliobacterium
           modesticaldum Ice1]
 gi|167591709|gb|ABZ83457.1| flagellar basal-body rod protein flgg, putative [Heliobacterium
           modesticaldum Ice1]
          Length = 258

 Score =  170 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 51/258 (19%), Positives = 98/258 (37%), Gaps = 22/258 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +        +A +  + T+++N++N +T G++  + +F +++ +             
Sbjct: 1   MMRALYSSATGMIAQQLNMDTISNNLANVNTNGYKKSRAEFQDLLYSTIRTATAQVPTGM 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG---IILTRDGRFKVTD 110
           Q  + V           G+ + T    D A+ G+ +F L +P        TRDG FK+  
Sbjct: 61  QVGAGVRPSSITTIISSGNMVQTDNPYDLAITGEGYFRLINPNNDAVPFYTRDGSFKLDK 120

Query: 111 DGSLVSASG----KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           +G LV+A G     +  L   +  + I     I      GE    G+ I    LY+    
Sbjct: 121 EGYLVNADGLRLDGFDPLPEGATDLDINADGMISYKNAVGERVDTGQRI---QLYTFPNP 177

Query: 167 QGFVRRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221
            G  R   + ++ +                  + + +LE SN   + EM  MI   + + 
Sbjct: 178 AGLNREGRNLLTQSEASGEAIGGDAGADGRGRIAQRYLESSNVQVVDEMVAMITAQRAYE 237

Query: 222 SITTLIDENEKSMLEAIR 239
             T  I   ++ + +A  
Sbjct: 238 VNTKAIQTADEMLGQANN 255


>gi|17548568|ref|NP_521908.1| flagellar basal-body rod protein FlgG [Ralstonia solanacearum
           GMI1000]
 gi|17430816|emb|CAD17498.1| probable flagellar basal-body rod protein flgg (distal rod protein)
           [Ralstonia solanacearum GMI1000]
          Length = 260

 Score =  170 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 92/259 (35%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A + +L  +++N++N +T GF+  +  F +++     +         
Sbjct: 1   MIRSLWISKTGMDAQQSQLDVISNNLANVNTTGFKRSRAVFEDLLYQNVREPGAQSSQQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  +             G+   TG   D A+ G+ +F ++ P G    TRDG F
Sbjct: 61  TLPSGMQIGTGTRIVATERLHTQGNLQQTGNSTDVAINGNGFFQVQMPDGTLAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           ++   G LV++SG      +            +   V      +     + T  L +   
Sbjct: 121 QINAQGQLVTSSGYPVQPAITVPQNATSLTVAKDGTVTVTTPGAVNSTQVGTFQLANFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +  +           +  +     + + ++E SN N + EM  MI   + +
Sbjct: 181 PAGLRSMGENLYAETEASGTANLAAPGSNGIGVLNQNYVETSNVNVVEEMVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ + +  +
Sbjct: 241 EINSKAVQTSDQMLEKLAQ 259


>gi|193222346|emb|CAL62046.2| Flagellar basal-body rod protein FlgG (Distal rod protein)
           [Herminiimonas arsenicoxydans]
          Length = 260

 Score =  170 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 89/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A + ++  +++N++N  T GF+  +  F +++               
Sbjct: 1   MIRSLWISKTGLDAQQTQMDVISNNLANVSTTGFKRSRAVFEDLLYQTIRQPGAASSQQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+   T    + A+EGD +F +  P      TRDG F
Sbjct: 61  ELPSGLQLGTGVRPVATERIHTQGNLQLTSNAKNLAIEGDGFFQVLMPDGTTAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +  + G +V++SG      +                V      +     I  + L +   
Sbjct: 121 QTDNQGQMVTSSGFPIQPAITIPENATSITISRDGIVSVTVSGTTAATEIGALQLATFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G + R  +              +  +     +K+ ++E SN N + E+  MI   + +
Sbjct: 181 PAGLMSRGENLYVETTASGTANTNTPGSNGAGLLKQNYVETSNVNVVEELVSMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  I  +++ +    +
Sbjct: 241 EINSKAITTSDQMLQRLTQ 259


>gi|319944133|ref|ZP_08018411.1| flagellar basal-body rod protein FlgG [Lautropia mirabilis ATCC
           51599]
 gi|319742627|gb|EFV95036.1| flagellar basal-body rod protein FlgG [Lautropia mirabilis ATCC
           51599]
          Length = 260

 Score =  170 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 48/259 (18%), Positives = 91/259 (35%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A + ++  ++ N++N  T G++  +  F +++      +        
Sbjct: 1   MIRSLWIAKTGLDAQQTQMDVISHNLANVSTNGYKRSQAVFEDLIYQNMRQVGAQSSADT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                 Q  + V           G+   T    D A+ G  +F L+ P G    TRDG F
Sbjct: 61  QLPTGLQLGTGVRPVATSRLFTQGNLQQTSNSFDLAISGHGFFQLQMPDGTTGYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQ------IPQKDEIFNVGEKGEISQKGKVIATMGL 160
                G LV+++G      +   P              +   G++G        +AT   
Sbjct: 121 HPDAQGQLVNSNGMPLSPPITIPPGTRDVTVGNDGTVSVTIAGQEGVTQIGQIQLATFQN 180

Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
            +    QG    + S  S               +++G+LE SN N + E+  MI   + +
Sbjct: 181 AAGLDPQGQNVFKESDASGTPTAATPGVNGAGLLQQGYLETSNVNVVEELVSMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  I  +++ +    +
Sbjct: 241 EINSKAIQTSDQMLARISQ 259


>gi|293395585|ref|ZP_06639868.1| flagellar basal-body rod protein FlgG [Serratia odorifera DSM 4582]
 gi|291421904|gb|EFE95150.1| flagellar basal-body rod protein FlgG [Serratia odorifera DSM 4582]
          Length = 260

 Score =  170 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 89/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A +  +  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MIPSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTMRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+   T    D A++G  +F +  P      TRDG F
Sbjct: 61  TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGYFQVMLPDGSQAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           ++  +G LV+ASG      +      +         V    +     + +  + L +   
Sbjct: 121 QIDQNGQLVTASGFQVQPAITIPANALSITVGRDGIVSVTQQGQTAAQQVGQLTLTTFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +            + +        + +G++E SN N   E+  MI + + +
Sbjct: 181 DSGLESVGENLYQETESSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ + +  +
Sbjct: 241 EINSKAVSTSDQMLQKLTQ 259


>gi|255322391|ref|ZP_05363537.1| flagellar basal-body rod protein FlgG [Campylobacter showae RM3277]
 gi|255300764|gb|EET80035.1| flagellar basal-body rod protein FlgG [Campylobacter showae RM3277]
          Length = 262

 Score =  170 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 38/261 (14%), Positives = 92/261 (35%), Gaps = 21/261 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S        +A + ++   + N++N +T+G++  + +F++++  +            
Sbjct: 1   MMRSIYSAATGMIAQQTQIDVTSHNIANVNTIGYKKNRAEFADLMYQVMEYAGTATSATT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                                  G F  T   LD  + G+ +F ++ P      TR+G F
Sbjct: 61  KSPTGIEVGLGARPTAITKIFSQGYFKETSNNLDMVIAGNGFFQVQLPDGTTAYTRNGAF 120

Query: 107 KVTDDGSLVSASGKY-PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           K+  +G++V++ G                       V      + +   +  + L +   
Sbjct: 121 KLDSEGTIVNSDGYVLQPQMTIPADATQVSVGTDGTVSVLQPGNTEMTQVGRIELANFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++   P      +           T+++GF+E SN   + EM  +I   + +
Sbjct: 181 PAGLHSMGDNLYLPTGSSGEVVVGTAGLDGLGTIRQGFVEMSNVQLVEEMTDLITGQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
            + +  I  ++  +   + ++
Sbjct: 241 EANSKAITTSDDML-SIVNSL 260


>gi|238919261|ref|YP_002932776.1| flagellar basal body rod protein FlgG [Edwardsiella ictaluri
           93-146]
 gi|238868830|gb|ACR68541.1| flagellar basal-body rod protein FlgG, putative [Edwardsiella
           ictaluri 93-146]
          Length = 260

 Score =  170 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 86/259 (33%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A +  +  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MIRSLYIAKTGLEAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTLRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+   T    D A++G  +F +  P      TRDG F
Sbjct: 61  NLPSGLQLGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVTLPDGSQAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V  +G LV+ASG      +                V    +     + +  + L +   
Sbjct: 121 QVDQNGQLVTASGFQITPAITIPANATSMTIGRDGIVSVTLQGQAAPQQVGQLTLNTFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +            + +        + +G++E SN N   E+  MI   + +
Sbjct: 181 DAGLESMGENLYQETASSGSPTESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  I  +++ +    +
Sbjct: 241 EINSKAISTSDQMLQRLTQ 259


>gi|296135671|ref|YP_003642913.1| flagellar basal-body rod protein FlgG [Thiomonas intermedia K12]
 gi|295795793|gb|ADG30583.1| flagellar basal-body rod protein FlgG [Thiomonas intermedia K12]
          Length = 261

 Score =  170 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 47/261 (18%), Positives = 91/261 (34%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  +      A + R+  +A+N++N +T GF+  +  F +++               
Sbjct: 1   MIRSLYVAKTGLEAEQTRMDVIANNLANVNTSGFKGSRAVFQDLLYQNLTQPGAQSSQST 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+   TG  LD A+ G  +F +  P   I  TRDG F
Sbjct: 61  QYPSGLQLGTGVRPVSTERLMTQGNLTQTGNSLDVAINGQGFFQVLEPNGTIAYTRDGTF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165
           ++ + G LV+A+G      +                           + +  + L S   
Sbjct: 121 QLNNQGQLVTANGYLVQPTVTIPASAQSVTIGNDGTVSVTLPGQAAPQQVGALQLASFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++                      +V++G+LE SN N + E+  MI   + +
Sbjct: 181 PTGLQSIGDNLYLQTGSSGAPNTGQPTLNGLGSVQQGYLESSNVNVVAELVDMISTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
              +  +  +++ +     N+
Sbjct: 241 EVNSKAVTASDQMLQYVNNNL 261


>gi|227820858|ref|YP_002824828.1| flagellar basal body rod protein FlgG [Sinorhizobium fredii NGR234]
 gi|227339857|gb|ACP24075.1| flagellar basal-body rod protein FlgG [Sinorhizobium fredii NGR234]
          Length = 262

 Score =  170 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 45/262 (17%), Positives = 94/262 (35%), Gaps = 21/262 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55
             + +I      A +  L  +A+N++N +T G++  + +FS+++   +            
Sbjct: 1   MKALSIAATGMNAQQLNLEVIANNIANINTTGYKRARAEFSDLLYQTERAQGVPNRSNQA 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                      V +         GS ++T  +LD AL G  WF +E+P    + TR G F
Sbjct: 61  IVPEGAIVGLGVQTAAVRNLHVQGSLVNTSNDLDLALVGRGWFQVETPNGETVYTRSGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
                G LV+  G   V  +                V  +   + + + I  + + +   
Sbjct: 121 NTNATGQLVTIDGYTVVPGITVPQDATEITVSASGQVLVRIGDATETQEIGQLTIANFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   +  +                       +K+G+LE SN + + E+  +I   + +
Sbjct: 181 EAGLEPQGENLFKQTAASGEPIVGTPADPGFAQIKQGYLESSNVDPVKEITDLISAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNIA 242
              + +I   ++      +N+ 
Sbjct: 241 EMNSKVIQAADEMAATVSKNLR 262


>gi|332161324|ref|YP_004297901.1| flagellar basal-body rod protein FlgG [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|318605244|emb|CBY26742.1| flagellar basal-body rod protein FlgG [Yersinia enterocolitica
           subsp. palearctica Y11]
 gi|325665554|gb|ADZ42198.1| flagellar basal-body rod protein FlgG [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|330860604|emb|CBX70901.1| flagellar basal-body rod protein flgG [Yersinia enterocolitica
           W22703]
          Length = 260

 Score =  170 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 89/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A +  +  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTMRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           G+   T    D A++G+ +F ++ P G    TRDG F
Sbjct: 61  TLPSGLQIGTGVRPVATERLHSQGNLSKTDNTKDVAIKGEGFFQVQMPDGTNAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQI-PQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +   +G LV++ G      +      +         V          + +  + L +   
Sbjct: 121 QTDQNGQLVTSGGFQIQPAITIPANAMSMTVGRDGIVSVTLPGQTATQQVGQLTLATFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
           + G      +            +       G  + +G++E SN N   E+  MI   + +
Sbjct: 181 NSGLESVGENLYQETASSGAPNETTPGLNGGGLLYQGYVETSNVNVAEELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ + +  +
Sbjct: 241 EINSKAVSTSDQMLQKLTQ 259


>gi|16760055|ref|NP_455672.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|16764535|ref|NP_460150.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|29142174|ref|NP_805516.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|56413834|ref|YP_150909.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|62179696|ref|YP_216113.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|161614598|ref|YP_001588563.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167553033|ref|ZP_02346783.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|167994043|ref|ZP_02575135.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168234105|ref|ZP_02659163.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|168237261|ref|ZP_02662319.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|168244778|ref|ZP_02669710.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|168264028|ref|ZP_02686001.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|168467131|ref|ZP_02700973.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|168822622|ref|ZP_02834622.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|194446556|ref|YP_002040433.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194450313|ref|YP_002045178.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194472223|ref|ZP_03078207.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194734396|ref|YP_002114178.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197251031|ref|YP_002146864.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197262058|ref|ZP_03162132.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197362757|ref|YP_002142394.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|200390304|ref|ZP_03216915.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|207857313|ref|YP_002243964.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|213424682|ref|ZP_03357447.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213582039|ref|ZP_03363865.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
 gi|213613179|ref|ZP_03371005.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
 gi|213648928|ref|ZP_03378981.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|213865503|ref|ZP_03387622.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|224584317|ref|YP_002638115.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|238911001|ref|ZP_04654838.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|289828578|ref|ZP_06546403.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-3139]
 gi|60392289|sp|P0A1J3|FLGG_SALTY RecName: Full=Flagellar basal-body rod protein flgG; AltName:
           Full=Distal rod protein
 gi|60392290|sp|P0A1J4|FLGG_SALTI RecName: Full=Flagellar basal-body rod protein flgG; AltName:
           Full=Distal rod protein
 gi|25298926|pir||AD0640 flagellar basal-body rod protein FlgG (distal rod protein)
           [imported] - Salmonella enterica subsp. enterica serovar
           Typhi (strain CT18)
 gi|47677|emb|CAA36314.1| flgG protein product (AA 1-260) [Salmonella enterica subsp.
           enterica serovar Typhimurium]
 gi|16419696|gb|AAL20109.1| flagellar biosynthesis protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|16502349|emb|CAD08303.1| flagellar basal-body rod protein FlgG (distal rod protein)
           [Salmonella enterica subsp. enterica serovar Typhi]
 gi|29137804|gb|AAO69365.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|56128091|gb|AAV77597.1| flagellar basal-body rod protein FlgG (distal rod protein)
           [Salmonella enterica subsp. enterica serovar Paratyphi A
           str. ATCC 9150]
 gi|62127329|gb|AAX65032.1| flagellar biosynthesis, cell-distal portion of basal-body rod
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|161363962|gb|ABX67730.1| hypothetical protein SPAB_02348 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194405219|gb|ACF65441.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194408617|gb|ACF68836.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194458587|gb|EDX47426.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194709898|gb|ACF89119.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|195630467|gb|EDX49093.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|197094234|emb|CAR59739.1| flagellar basal-body rod protein FlgG (distal rod protein)
           [Salmonella enterica subsp. enterica serovar Paratyphi A
           str. AKU_12601]
 gi|197214734|gb|ACH52131.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197240313|gb|EDY22933.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197289797|gb|EDY29158.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|199602749|gb|EDZ01295.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|205322431|gb|EDZ10270.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|205328014|gb|EDZ14778.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205331903|gb|EDZ18667.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|205336447|gb|EDZ23211.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|205341038|gb|EDZ27802.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|205347402|gb|EDZ34033.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|206709116|emb|CAR33449.1| flagellar basal-body rod protein FlgG (distal rod protein)
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. P125109]
 gi|224468844|gb|ACN46674.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|261246390|emb|CBG24199.1| flagellar basal-body rod protein FlgG (distal rod protein)
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. D23580]
 gi|267992953|gb|ACY87838.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301157720|emb|CBW17212.1| flagellar basal-body rod protein FlgG (distal rod protein)
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. SL1344]
 gi|312912166|dbj|BAJ36140.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|320086381|emb|CBY96154.1| Flagellar basal-body rod protein flgG Distal rod protein
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. 2007-60-3289-1]
 gi|321223797|gb|EFX48860.1| Flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
 gi|322616549|gb|EFY13458.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322620510|gb|EFY17374.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322622504|gb|EFY19349.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322629655|gb|EFY26430.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322632625|gb|EFY29371.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322636880|gb|EFY33583.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322641582|gb|EFY38220.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322644072|gb|EFY40618.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322650028|gb|EFY46446.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322653953|gb|EFY50276.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322658485|gb|EFY54747.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322663343|gb|EFY59545.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322670077|gb|EFY66217.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322674859|gb|EFY70950.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322676671|gb|EFY72738.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322682593|gb|EFY78612.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322686654|gb|EFY82633.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|322714166|gb|EFZ05737.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
 gi|323129449|gb|ADX16879.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
 gi|323195768|gb|EFZ80944.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323198340|gb|EFZ83444.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323209179|gb|EFZ94116.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323209683|gb|EFZ94612.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323217861|gb|EGA02576.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323222149|gb|EGA06533.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323224921|gb|EGA09179.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323229663|gb|EGA13786.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323232888|gb|EGA16984.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323240623|gb|EGA24665.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323242937|gb|EGA26958.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323250254|gb|EGA34143.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323252629|gb|EGA36467.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323258843|gb|EGA42496.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323261032|gb|EGA44625.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323266941|gb|EGA50426.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323269982|gb|EGA53431.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
 gi|332988070|gb|AEF07053.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 260

 Score =  170 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 88/259 (33%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M +S  I      A +  +  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           G+   T    D A++G  +F +  P G    TRDG F
Sbjct: 61  TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGTSAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V  +G LV+A G      +      +         V    +       +  + L +   
Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +            + +        + +G++E SN N   E+  MI + + +
Sbjct: 181 DTGLESIGENLYIETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +   ++ + +  +
Sbjct: 241 EINSKAVSTTDQMLQKLTQ 259


>gi|296103609|ref|YP_003613755.1| Flagellar basal-body rod protein, FlgG [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295058068|gb|ADF62806.1| Flagellar basal-body rod protein, FlgG [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 260

 Score =  170 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 48/259 (18%), Positives = 93/259 (35%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A +  +  +++N++N +T GF+  +  F +++               
Sbjct: 1   MIRSLWIAKTGLEAQQLNMDVISNNLANVNTNGFKRQRAVFQDLLYQNMRQPGAQSTEQN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G    TG E D A+EG+ +F ++ P      TRDG F
Sbjct: 61  TLPSGLQLGTGVRPVSTQRVHTQGGMNQTGDEYDVAIEGEGFFQVQMPDGSTAYTRDGHF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIP-QKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
             + DG LV+A G      +                V  K     + + I  + L +   
Sbjct: 121 SKSPDGQLVNAEGYPIQPGIVIPQDATKLNIGSDGIVSVKVPGQAEEQQIGQLTLTTFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
           + G      +            +L+       T+K+ ++E SN N   E+  MI + + +
Sbjct: 181 NAGLESIGGNLYKETQSSGAPNELNPGMESAGTLKQSYVEISNVNVAEELVTMIQVQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ +    +
Sbjct: 241 EINSKAVSASDQMLQRLSQ 259


>gi|260597447|ref|YP_003210018.1| flagellar basal body rod protein FlgG [Cronobacter turicensis
           z3032]
 gi|260216624|emb|CBA29921.1| Flagellar basal-body rod protein flgG [Cronobacter turicensis
           z3032]
          Length = 260

 Score =  170 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 90/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M +S  I      A +  +  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           G+   T    D A++G  +F +  P G    TRDG F
Sbjct: 61  TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVLLPDGTSAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V  +G LV+A G      +      +         V    + +     +  + L +   
Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANALSITVGRDGVVSVTQQGTAAPVQVGQINLTTFMN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +  +         + +        + +G++E SN N   E+  MI + + +
Sbjct: 181 DSGLESIGENLYTETQSSGTPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +   ++ + +  +
Sbjct: 241 EINSKAVSTTDQMLQKLTQ 259


>gi|153831580|ref|ZP_01984247.1| flagellar basal-body rod protein FlgG [Vibrio harveyi HY01]
 gi|156976143|ref|YP_001447049.1| flagellar basal body rod protein [Vibrio harveyi ATCC BAA-1116]
 gi|269960118|ref|ZP_06174494.1| Putative flagellar basal-body rod protein flgG [Vibrio harveyi
           1DA3]
 gi|148872090|gb|EDL70907.1| flagellar basal-body rod protein FlgG [Vibrio harveyi HY01]
 gi|156527737|gb|ABU72822.1| hypothetical protein VIBHAR_04914 [Vibrio harveyi ATCC BAA-1116]
 gi|269835089|gb|EEZ89172.1| Putative flagellar basal-body rod protein flgG [Vibrio harveyi
           1DA3]
          Length = 261

 Score =  170 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 46/261 (17%), Positives = 100/261 (38%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M ++  +      A + +++ +++N++N +TVGF+  +V F ++  +I+           
Sbjct: 1   MHSALWVSKTGMAAQDTKMTAISNNLANVNTVGFKRDRVVFEDLFYSIQRQPGAQVDQVN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106
                 Q  S V           G+  +T  ELD A+ G  +F +E+    I+ TR+G+F
Sbjct: 61  ELPSGVQLGSGVRVVGTQKVFTQGNTQNTTQELDLAVMGQGFFQIENSDGQIMYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
            +  +G +V++ G      +      I     +   V          + +  + L     
Sbjct: 121 HINSEGLMVNSQGLPLEPQIQIPDNAISFSVGVDGTVTTTSADDPTPQQLGQITLAKFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +         P ++         ++K+G LE SN   + EM  MI   + +
Sbjct: 181 PAGLEAVGGNLFRETEASGPADELIAGEDGAGSIKQGALEGSNVQVVEEMVDMITTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
                ++   +  +    +++
Sbjct: 241 EMNAKVVSAADDMLKFVAQSM 261


>gi|70729006|ref|YP_258740.1| flagellar basal body rod protein FlgG [Pseudomonas fluorescens
           Pf-5]
 gi|68343305|gb|AAY90911.1| flagellar basal-body rod protein FlgG [Pseudomonas fluorescens
           Pf-5]
          Length = 261

 Score =  170 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 49/261 (18%), Positives = 94/261 (36%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  +      A +  L+ +++N++N  T GF+  + +F +++  IK           
Sbjct: 1   MLPALWVAKTGLSAQDTNLTVISNNLANVSTTGFKRDRAEFQDLLYQIKRQPGAQSTQDS 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V       +   GS  +T   LD A+ G  +F +  P      TRDG F
Sbjct: 61  ELPTGLQVGTGVRIVGTQKNFTAGSLQTTEQPLDLAINGRGFFQILQPDGTTAYTRDGTF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
            +  DG +V+ASG      +      Q     +   V      +   +VI  +       
Sbjct: 121 HLNSDGQIVTASGFALEPAVVVPNDAQTFTVGQDGTVSITIAGNPASQVIGNLQTADFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   + N+           +          T  +  LE SN +++ EM  MI   + +
Sbjct: 181 PAGLQAQGNNLFLETAASGAPQIGTPGLNGFGTTLQNTLEASNVSTVEEMVNMITTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
              + +I   ++ +    + +
Sbjct: 241 EMNSKVISTADQMLSFITQKL 261


>gi|198244335|ref|YP_002215958.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|197938851|gb|ACH76184.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|326623706|gb|EGE30051.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
          Length = 260

 Score =  170 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 88/259 (33%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M +S  I      A +  +  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSGQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           G+   T    D A++G  +F +  P G    TRDG F
Sbjct: 61  TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGTSAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V  +G LV+A G      +      +         V    +       +  + L +   
Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +            + +        + +G++E SN N   E+  MI + + +
Sbjct: 181 DTGLESIGENLYIETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +   ++ + +  +
Sbjct: 241 EINSKAVSTTDQMLQKLTQ 259


>gi|156934438|ref|YP_001438354.1| flagellar basal body rod protein FlgG [Cronobacter sakazakii ATCC
           BAA-894]
 gi|156532692|gb|ABU77518.1| hypothetical protein ESA_02269 [Cronobacter sakazakii ATCC BAA-894]
          Length = 260

 Score =  170 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 90/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M +S  I      A +  +  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           G+   T    D A++G  +F +  P G    TRDG F
Sbjct: 61  TLPSGLQIGTGVRPVATERLHTQGNLSQTNNSKDVAIKGQGFFQVLLPDGTSAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V  +G LV+A G      +      +         V    + +     +  + L +   
Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANALSITVGRDGVVSVTQQGTAAPVQVGQINLTTFMN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +  +         + +        + +G++E SN N   E+  MI + + +
Sbjct: 181 DSGLESIGENLYTETQSSGTPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +   ++ + +  +
Sbjct: 241 EINSKAVSTTDQMLQKLTQ 259


>gi|83747652|ref|ZP_00944688.1| FlgG [Ralstonia solanacearum UW551]
 gi|207728348|ref|YP_002256742.1| flagellar basal-body rod protein flgg (distal rod protein)
           [Ralstonia solanacearum MolK2]
 gi|207739735|ref|YP_002258128.1| flagellar basal-body rod protein flgg (distal rod protein)
           [Ralstonia solanacearum IPO1609]
 gi|300696915|ref|YP_003747576.1| FlgG: flagellar basal-body rod protein [Ralstonia solanacearum
           CFBP2957]
 gi|83725704|gb|EAP72846.1| FlgG [Ralstonia solanacearum UW551]
 gi|206591594|emb|CAQ57206.1| flagellar basal-body rod protein flgg (distal rod protein)
           [Ralstonia solanacearum MolK2]
 gi|206593117|emb|CAQ60023.1| flagellar basal-body rod protein flgg (distal rod protein)
           [Ralstonia solanacearum IPO1609]
 gi|299073639|emb|CBJ53159.1| FlgG: Flagellar basal-body rod protein [Ralstonia solanacearum
           CFBP2957]
          Length = 260

 Score =  170 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 91/259 (35%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A + +L  +++N++N +T GF+  +  F +++     +         
Sbjct: 1   MIRSLWISKTGMDAQQSQLDVISNNLANVNTTGFKRSRAVFEDLLYQNVREPGAQSSQQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  +             G+   TG   D A+ G+ +F ++ P G    TRDG F
Sbjct: 61  TLPSGMQIGTGTRIVATERLHTQGNLQQTGNSTDVAINGNGFFQVQMPDGTLAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           ++   G LV++SG      +            +   V      +     + T  L +   
Sbjct: 121 QINAQGQLVTSSGYPVQPAVTVPQNATSLTIAKDGTVTVTTPGAVNSTQVGTFQLANFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +  +           +        + + ++E SN N + EM  MI   + +
Sbjct: 181 PAGLRSMGENLYAETEASGTANLAAPGANGVGVLNQNYVETSNVNVVEEMVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ + +  +
Sbjct: 241 EINSKAVQTSDQMLEKLAQ 259


>gi|289666050|ref|ZP_06487631.1| flagellar basal body rod protein FlgG [Xanthomonas campestris pv.
           vasculorum NCPPB702]
 gi|289670510|ref|ZP_06491585.1| flagellar basal body rod protein FlgG [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 261

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 48/261 (18%), Positives = 90/261 (34%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  +      A + R+S +++N++NT+T GF+  +  F +++               
Sbjct: 1   MNQALWVAKTGLDAQQTRMSVISNNLANTNTTGFKRDRAAFEDLLYQQVRAPGGSTSAQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V     +   + GS   TG  LD  + G  +F ++ P G    TRDG F
Sbjct: 61  QLPTGLQLGTGVRVVSTFKGFDQGSQQQTGRALDVMVNGRGFFEVQMPDGTSAYTRDGTF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165
           ++   G LV+ SG      +                           + I  + L     
Sbjct: 121 QINAQGQLVTNSGYPLQPGIQVPEGAQSLTIGNDGTISVTLAGQAAAQEIGALTLTDFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   +  +         P ++ +          +G LE SN N++ E+  MI   + +
Sbjct: 181 PSGLQAKGENLFVETTASGPAQNGTPGLNGLGNTVQGALEGSNVNTVEELVSMIETQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
                 I   +  +     N+
Sbjct: 241 EMNAKAISTTDSMLGYLNNNV 261


>gi|289208116|ref|YP_003460182.1| flagellar basal-body rod protein FlgG [Thioalkalivibrio sp. K90mix]
 gi|288943747|gb|ADC71446.1| flagellar basal-body rod protein FlgG [Thioalkalivibrio sp. K90mix]
          Length = 262

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 51/262 (19%), Positives = 92/262 (35%), Gaps = 20/262 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  I      A   R+STV++N++N +T GF+  +  F +++               
Sbjct: 1   MNQALWIAKTGLDAQHTRMSTVSNNLANVNTTGFKKDRAVFEDLIYQTVRQPGAQATQDQ 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V +         G+   T   LD A+EG  +F +  P   I  TRDG F
Sbjct: 61  QLPSGLQIGTGVRAVSTEKMFTQGNLQQTDNSLDVAIEGRGFFQVLMPNGDIGYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           ++  DG +V ++G      +   P        +   V  +     +   +  + L     
Sbjct: 121 QLNADGEVVMSNGYPLQPGLFVPPDTQSLAIGKDGTVTAQIPGQAEPVELGNIQLADFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +           +          T+ +G LE SN N   E+  MI   + +
Sbjct: 181 PAGLQAIGENLFQETAASGVAQQAQPGLNGTGTLVQGSLETSNVNIAEELVNMIETQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNIA 242
              +  I   ++S+    + I 
Sbjct: 241 EVNSKAISAADQSLQFVNQTIG 262


>gi|146311248|ref|YP_001176322.1| flagellar basal body rod protein FlgG [Enterobacter sp. 638]
 gi|145318124|gb|ABP60271.1| flagellar basal-body rod protein FlgG [Enterobacter sp. 638]
          Length = 260

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 89/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M +S  I      A +  +  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           G+   T    D A++G  +F ++ P G    TRDG F
Sbjct: 61  TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVQLPDGTSAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V  +G LV+A G      +      +         V    +       +  + L +   
Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANSLSITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +  +         +          + +G++E SN N   E+  MI + + +
Sbjct: 181 DTGLESIGENLYTETQSSGAPNESTPGLNGSGLLYQGYVETSNVNVAEELVNMIQVQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +   ++ + +  +
Sbjct: 241 EINSKAVSTTDQMLQKLTQ 259


>gi|237750021|ref|ZP_04580501.1| flagellar distal rod protein FlgG [Helicobacter bilis ATCC 43879]
 gi|229374432|gb|EEO24823.1| flagellar distal rod protein FlgG [Helicobacter bilis ATCC 43879]
          Length = 262

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 49/256 (19%), Positives = 96/256 (37%), Gaps = 20/256 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S        L  + ++ T ++N++N +TVGF+  + +F+++          +     
Sbjct: 1   MMRSLYTATTGMLGQQLQIDTTSNNIANVNTVGFKRQRAEFNDLFYQTLQFAGTQTSETT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                      V +G        GS   T   LD A+ G  +F ++ P   I  TR G F
Sbjct: 61  LTPTGIEVGVGVRTGAINRIYSQGSPKETENPLDVAIMGKGFFPIQLPDGNIAYTRSGNF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165
           K+ D G++V++ G      +   P                   + + +V+  + L +   
Sbjct: 121 KLDDQGNIVTSEGYLVQPQITVPPEAQSINIGADGTVSVTLGNNGQAEVLGQIQLVNFVN 180

Query: 166 SQGFVRRENS-GISPNIPPTPLE----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++  ++ N    P+E          ++ GFLE SN   + EM  +I   + +
Sbjct: 181 PAGLHGLGDNLYMNTNASGEPIEGIAGQDGLGQIRAGFLELSNVRLVSEMTDLITGQRAY 240

Query: 221 NSITTLIDENEKSMLE 236
            + +  I   +  +  
Sbjct: 241 EANSKSIQTADSMLQT 256


>gi|320354342|ref|YP_004195681.1| flagellar basal-body rod protein FlgG [Desulfobulbus propionicus
           DSM 2032]
 gi|320122844|gb|ADW18390.1| flagellar basal-body rod protein FlgG [Desulfobulbus propionicus
           DSM 2032]
          Length = 260

 Score =  169 bits (428), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 45/258 (17%), Positives = 84/258 (32%), Gaps = 20/258 (7%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             S         A    +  +A+N++N  T GF+  +  F +++  I             
Sbjct: 1   MRSLWTSTTGMSAQNLNMDVIANNLANVSTTGFKKSRADFQDLLYQIMKVPGSPTSADTR 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFK 107
                Q    V           G  + T   LD A+EG  +F +  P   I  TR G  K
Sbjct: 61  SPTGIQVGLGVKPAAVTKVFTEGDIVQTENTLDVAIEGPGFFQVTLPDGNIAYTRAGNLK 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           +  +G L ++ G     ++      +     +   V            +  + L      
Sbjct: 121 LDGEGRLTTSDGFPIEPEIVIPEDAREVTISQTGVVSAIVGDDTTSTELGNVDLVDFVND 180

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFN 221
            G +    +              +  T     + +G++E+SN N + EM  MI   + F 
Sbjct: 181 AGLIAIGRNLFRETEASGAPLIGAPGTNGIGTLLQGYVENSNVNLVEEMTHMITTQRAFE 240

Query: 222 SITTLIDENEKSMLEAIR 239
             + +I  +++ M     
Sbjct: 241 INSNVITTSDEMMQTVTN 258


>gi|258514025|ref|YP_003190247.1| flagellar basal-body rod protein FlgF [Desulfotomaculum acetoxidans
           DSM 771]
 gi|257777730|gb|ACV61624.1| flagellar basal-body rod protein FlgF [Desulfotomaculum acetoxidans
           DSM 771]
          Length = 255

 Score =  169 bits (428), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 54/256 (21%), Positives = 107/256 (41%), Gaps = 16/256 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50
           M      G A    L+++++ +A+N++N +T GF+  +         + N          
Sbjct: 1   MIRGIYSGAAGMNVLQEKMNVMANNLANVNTNGFKMDQAVVKSFNEQLINLIDTGKDIRK 60

Query: 51  --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
              I      V   +       G F  TG + D AL+G+ +F +    G   TRDG F +
Sbjct: 61  LRPIGNFCHGVTVDEINTYFTQGVFQQTGHDTDLALDGEGFFRVSGAEGDYYTRDGAFSL 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
            ++G LV++ G   +         + +  +   +G  G+I   G    T+ + + D  Q 
Sbjct: 121 DNEGYLVTSRGYTLMG---QNGPVMTEPGKNLKIGSDGKIYLDGVEQDTLDIKNFDDLQK 177

Query: 169 FVRRENSGISPNIPPTPLEDLSGV-TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
             +  ++              +   T+K+GFLE SN   + EM  +I +++ + +   L+
Sbjct: 178 LKKEGDNFFRVENEADAGVYDATNFTLKQGFLEKSNVELVNEMTDIIAVSRAYETSQKLM 237

Query: 228 DENEKSMLEAIRNIAS 243
              ++ + +A+ NI +
Sbjct: 238 QVQDELLGKAVNNIGT 253


>gi|325291945|ref|YP_004277809.1| flagellar basal body rod protein FlgF [Agrobacterium sp. H13-3]
 gi|325059798|gb|ADY63489.1| flagellar basal body rod protein FlgF [Agrobacterium sp. H13-3]
          Length = 244

 Score =  169 bits (428), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 106/242 (43%), Positives = 162/242 (66%), Gaps = 1/242 (0%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           MQ+   + L++Q+ALE+RL+T++DNM+N +TVGFR  +VKF E+V    ND++ K++FV+
Sbjct: 1   MQSGLYVALSSQIALERRLTTISDNMANANTVGFRGSEVKFDEMVAKNHNDMNAKVAFVS 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
            G +YLS   G+F  TG   DFA++GDAWFA+++P G IL+RDGRF +  DG+L+S+SG 
Sbjct: 61  QGNDYLSTRQGAFEQTGNSFDFAIKGDAWFAMDTPDGQILSRDGRFTMRPDGALISSSGY 120

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
            PVLD    PIQ+        V   G I Q   ++AT+G++  D S+GF+R  NSG+ P 
Sbjct: 121 -PVLDAGGGPIQLNANGGPITVSLDGAIRQNDNIVATLGVFQADFSKGFLRHPNSGVKPV 179

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
            PPTP+ +   V V +G+LE SN N + +M Q+I + + F SI++L+ + E +  +AI+ 
Sbjct: 180 APPTPVVNNHEVGVVQGYLEQSNVNGISQMTQLIQVNRAFESISSLMRDTESTFGDAIKT 239

Query: 241 IA 242
           + 
Sbjct: 240 LG 241


>gi|297538898|ref|YP_003674667.1| flagellar basal-body rod protein FlgG [Methylotenera sp. 301]
 gi|297258245|gb|ADI30090.1| flagellar basal-body rod protein FlgG [Methylotenera sp. 301]
          Length = 260

 Score =  169 bits (428), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 90/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A + ++  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MIRSLWISKTGLDAQQTQMDVIANNLANVSTNGFKRSRAVFEDLLYQNIRQPGAQTSQQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+   T    D A++G  +F +  P      TRDG F
Sbjct: 61  QLPSGLQLGTGVRPVATERIFSQGNLQQTSNNKDVAIQGAGFFQVLMPDGTTAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +    G LV++SG      +      +         V      S     I T+ L +   
Sbjct: 121 QTDSQGQLVTSSGFPVQPAITVPANAESFTVGRDGTVSITTTGSTATTQIGTLQLATFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
           + G   +  +              +  T     + +G++E SN N + E+  MI   + +
Sbjct: 181 TAGLQGKGENLFVETTASGNPTVNNPGTNGAGLLTQGYVETSNVNVVEELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  I  +++ + +  +
Sbjct: 241 EINSKAITTSDQMLQKLTQ 259


>gi|39998142|ref|NP_954093.1| flagellar basal body rod protein FlgG [Geobacter sulfurreducens
           PCA]
 gi|39985088|gb|AAR36443.1| flagellar basal-body rod protein FlgG [Geobacter sulfurreducens
           PCA]
 gi|298507079|gb|ADI85802.1| flagellar basal body rod protein FlgG [Geobacter sulfurreducens
           KN400]
          Length = 262

 Score =  169 bits (428), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 48/259 (18%), Positives = 89/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +     +   A +  +  VA+N++N +T GF+  +  F +++               
Sbjct: 1   MIRALWTAASGMQAQQTNIDVVANNLANVNTAGFKKSRADFQDLMYQNLKTSGAPSTSST 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q                G+   TG ELD A+EGD +F ++ P      +R G F
Sbjct: 61  QVPSGIQIGLGAKLAAVTKLFSEGNINQTGNELDIAIEGDGFFQIQMPDGTTTYSRAGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           K  D G +V++ G   + ++                V            I  + L +   
Sbjct: 121 KRDDQGRVVTSDGYPMLPELVVPSNATSISVGNDGTVSVTQAGQTSPTNIGNIQLATFSN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +    +         +       T+ +GFLE SN + M EM  MI   + +
Sbjct: 181 PSGLTALGRNLFQESDSSGTPTTGTPGQNGIGTLAQGFLEMSNVSVMEEMVNMIVGQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +   ++ + +A  
Sbjct: 241 EVNSKAVQAADEMLQQANN 259


>gi|299068734|emb|CBJ39973.1| FlgG: Flagellar basal-body rod protein [Ralstonia solanacearum
           CMR15]
          Length = 260

 Score =  169 bits (428), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 91/259 (35%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A + +L  +++N++N +T GF+  +  F +++     +         
Sbjct: 1   MIRSLWISKTGMDAQQSQLDVISNNLANVNTTGFKRSRAVFEDLLYQNVREPGAQSSQQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  +             G+   TG   D A+ G+ +F ++ P G    TRDG F
Sbjct: 61  TLPSGMQIGTGTRIVATERLHTQGNLQQTGNSTDVAINGNGFFQVQMPDGTLAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           ++   G LV++SG      +            +   V      +     + T  L +   
Sbjct: 121 QINAQGQLVTSSGYPVQPAVTVPQNATSLTVAKDGTVTVTTPGAVNSTQVGTFQLANFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +  +           +        + + ++E SN N + EM  MI   + +
Sbjct: 181 PAGLRSMGENLYAETEASGTANLAAPGANGVGVLNQNYVETSNVNVVEEMVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ + +  +
Sbjct: 241 EINSKAVQTSDQMLEKLAQ 259


>gi|309388846|gb|ADO76726.1| flagellar basal-body rod protein FlgG [Halanaerobium praevalens DSM
           2228]
          Length = 260

 Score =  169 bits (428), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 46/260 (17%), Positives = 96/260 (36%), Gaps = 21/260 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M ++         + +  +  +++N++N +T GF+  K+ F++++               
Sbjct: 1   MISALWTSATGMNSQQTNIDVISNNLANVNTSGFKKSKINFADLIYTQMRQPGTPNAQGA 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                                  G+  +T + LD  +EGD  F ++ P G    TRDG F
Sbjct: 61  EVPTGIEIGHGSKVNSTQKIFTQGNIQNTDSPLDMVIEGDGLFRVQLPDGNFAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           K   +G++V++ G         +P +  +     +      +  + + +  + LY     
Sbjct: 121 KQDSNGNVVTSDGYQLD-PGFQIPQEATEISITSDGTINALVDGENQQLGQIQLYRFANP 179

Query: 167 QGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221
            G      +  S  +                TV +GFLE SN   + EM  MI   + + 
Sbjct: 180 AGLSSEGRNLYSDTVASGQAMQGVPGEQGFGTVTQGFLEMSNVKVVEEMVNMIAAQRAYE 239

Query: 222 SITTLIDENEKSMLEAIRNI 241
           + +  I  +++ +  A   +
Sbjct: 240 TNSKSIQASDEMLQTA-NQL 258


>gi|300693340|ref|YP_003749313.1| flgg: flagellar basal-body rod protein [Ralstonia solanacearum
           PSI07]
 gi|299075377|emb|CBJ34672.1| FlgG: Flagellar basal-body rod protein [Ralstonia solanacearum
           PSI07]
          Length = 260

 Score =  169 bits (428), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 91/259 (35%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A + +L  +++N++N +T GF+  +  F +++     +         
Sbjct: 1   MIRSLWISKTGMDAQQSQLDVISNNLANVNTTGFKRSRAVFEDLLYQNVREPGAQSSQQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  +             G+   TG   D A+ G+ +F ++ P G    TRDG F
Sbjct: 61  TLPSGMQIGTGTRIVATERLHTQGNLQQTGNSTDAAINGNGFFQVQMPDGTLAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           ++   G LV++SG      +            +   V      S     + T  L +   
Sbjct: 121 QINAQGQLVTSSGYPVQPAITVPQNATSLTIAKDGVVTVTTPGSVNSTQVGTFQLANFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +  +           +        + + ++E SN N + EM  MI   + +
Sbjct: 181 PAGLRSMGENLYAETEASGTANLAAPGANGIGVLNQNYVETSNVNVVEEMVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ + +  +
Sbjct: 241 EINSKAVQTSDQMLEKLAQ 259


>gi|254473318|ref|ZP_05086715.1| flagellar basal-body rod protein FlgG [Pseudovibrio sp. JE062]
 gi|211957434|gb|EEA92637.1| flagellar basal-body rod protein FlgG [Pseudovibrio sp. JE062]
          Length = 262

 Score =  169 bits (428), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 40/256 (15%), Positives = 83/256 (32%), Gaps = 21/256 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             +  I      A ++ L  +++N++N +T  F+  + +FS+++  +             
Sbjct: 1   MKALAIAATGMSAQQKNLEVISNNIANMNTTAFKASRAEFSDLLYQMDRAAGVSNRGGAA 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                 Q+   V +         G    T    D A++G  WF +  P G    TR G F
Sbjct: 61  PVPEGIQQGLGVKTAAIRELHSKGPLNHTTNTFDLAIDGQGWFEVVGPDGEALYTRAGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-IATMGLYSVDM 165
            V  +G+LV+  G      +      +                      I  + L S   
Sbjct: 121 NVNGEGALVTLDGYEVQPGITVPIDAVKITVNESGEVFATYADGNPATSIGQLSLTSFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +                 +     +++G+LE +N + + E+  +I   + +
Sbjct: 181 DAGLRAIGGNLFRETEASGAPNTGIAGEGPLGVIRQGYLEGANVDPVKEITSLISAQRGY 240

Query: 221 NSITTLIDENEKSMLE 236
              + +I   +     
Sbjct: 241 EMNSKVIQAADDMAGT 256


>gi|88799023|ref|ZP_01114604.1| Flagellar basal body rod protein [Reinekea sp. MED297]
 gi|88778250|gb|EAR09444.1| Flagellar basal body rod protein [Reinekea sp. MED297]
          Length = 261

 Score =  169 bits (428), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 45/261 (17%), Positives = 92/261 (35%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  +G     A +  LST+++N++N  T G++  +  F +++  ++           
Sbjct: 1   MHKALWVGKTGLEAQDIALSTISNNLANAATTGYKKERAVFEDLIYQVQRQPGAQSSQNT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V +         G    T   LD A+ G  +F +  P   I  TRDG F
Sbjct: 61  QLPSGLQLGTGVRTVGTQKQFVQGDLNMTEQPLDMAINGRGFFQVLMPDGNIAYTRDGTF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
            +  +G++V+A+G +   ++                V            I  + +     
Sbjct: 121 HLDAEGNVVTANGYFLEPNIQVPEQTKTITVGTDGIVTAVSAGDNDPVEIGNIDIVDFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     N+            +         ++ +G LE+SN   + EM  MI   + +
Sbjct: 181 PAGLQAIGNNLFLETAASGAPAEGVPSLDGFGSIIQGALENSNVTIVEEMVDMISTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
              +  +   ++ +     N+
Sbjct: 241 EMNSKAVSTADQMLGFITSNL 261


>gi|84624090|ref|YP_451462.1| flagellar basal body rod protein FlgG [Xanthomonas oryzae pv.
           oryzae MAFF 311018]
 gi|161898985|ref|YP_201214.2| flagellar basal body rod protein FlgG [Xanthomonas oryzae pv.
           oryzae KACC10331]
 gi|166712060|ref|ZP_02243267.1| flagellar basal body rod protein FlgG [Xanthomonas oryzae pv.
           oryzicola BLS256]
 gi|188576758|ref|YP_001913687.1| flagellar basal body rod protein FlgG [Xanthomonas oryzae pv.
           oryzae PXO99A]
 gi|188576950|ref|YP_001913879.1| flagellar basal body rod protein FlgG [Xanthomonas oryzae pv.
           oryzae PXO99A]
 gi|84368030|dbj|BAE69188.1| flagellar biosynthesis cell-distal portion of basal-body rod
           [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|188521210|gb|ACD59155.1| flagellar basal-body rod protein FlgG [Xanthomonas oryzae pv.
           oryzae PXO99A]
 gi|188521402|gb|ACD59347.1| flagellar basal-body rod protein FlgG [Xanthomonas oryzae pv.
           oryzae PXO99A]
          Length = 261

 Score =  169 bits (428), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 48/261 (18%), Positives = 90/261 (34%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  +      A + R+S +++N++NT+T GF+  +  F +++               
Sbjct: 1   MNQALWVAKTGLDAQQTRMSVISNNLANTNTTGFKRDRAAFEDLLYQQVRAPGGSTSAQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V     +   + GS   TG  LD  + G  +F ++ P G    TRDG F
Sbjct: 61  QLPTGLQLGTGVRVVSTFKGFDQGSQQQTGRALDVMVNGRGFFEVQMPDGTSAYTRDGTF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165
           ++   G LV+ SG      +                           + I  + L     
Sbjct: 121 QINAQGQLVTNSGYPLQPGIQVPEGAQSLTIGNDGTISVTLAGQAAAQEIGALTLTDFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   +  +         P ++ +          +G LE SN N++ E+  MI   + +
Sbjct: 181 PSGLQSKGENLFVETTASGPAQNGTPGLNGLGNTVQGALEGSNVNTVEELVSMIETQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
                 I   +  +     N+
Sbjct: 241 EMNAKAISTTDAMLGYLNNNV 261


>gi|50120641|ref|YP_049808.1| flagellar basal body rod protein FlgG [Pectobacterium atrosepticum
           SCRI1043]
 gi|49611167|emb|CAG74613.1| flagellar basal-body rod protein [Pectobacterium atrosepticum
           SCRI1043]
          Length = 260

 Score =  169 bits (428), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 89/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A +  +  +++N++N  T GF+  +  F +++               
Sbjct: 1   MIRSLWIAKTGLNAQQTNMDVISNNLANVSTNGFKRQRAVFEDLMYQTIRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+F  TG   D A++G  +F ++ P      TRDG F
Sbjct: 61  MLPSGLQLGTGVRPVSTERIHTQGTFSETGNSKDVAIKGQGFFQVQLPDGTTAYTRDGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIP-QKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           ++  +G LV++SG      +                V  K +       I  + L +   
Sbjct: 121 QLDGNGQLVTSSGYQVQPAITVPANATELNIGRDGIVSVKVQGQAATNQIGQLTLTTFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +            + +        + + ++E SN N   E+  MI   + +
Sbjct: 181 DSGLESMGENLYLETASSGAPNETNPGLNGAGLLYQKYVETSNVNVAEELVSMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  I  +++ + +  +
Sbjct: 241 EINSKAISSSDQMLQKLTQ 259


>gi|308050022|ref|YP_003913588.1| flagellar basal-body rod protein FlgG [Ferrimonas balearica DSM
           9799]
 gi|307632212|gb|ADN76514.1| flagellar basal-body rod protein FlgG [Ferrimonas balearica DSM
           9799]
          Length = 261

 Score =  169 bits (428), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 49/261 (18%), Positives = 100/261 (38%), Gaps = 21/261 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           MQ++  +      A + +++T+A+N++N +T GF+  +V F+++    +           
Sbjct: 1   MQSALWVSKTGLTAQDTKMTTIANNLANVNTTGFKRDRVSFNDLFYQTQRQPGAMADQQN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           G  I+T   LD A+ G  +F +E P G    TRDG+F
Sbjct: 61  ELPSGLQLGTGVRITGTQKVFTTGDIITTNQPLDLAIMGQGFFQVEQPNGDFAYTRDGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
               DG +V++ G   V  +      +         V  +       + +  + L +   
Sbjct: 121 YRNADGLVVTSEGMPLVPAVEIPEDALTVTVGSDGIVTAQIAGDAVPQELGQITLANFTN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     N+            +      +   +K+G LE +N N + EM +MI   + +
Sbjct: 181 PAGLEAFGNNLYRETAASGVAIEGIPGDAAIGQLKQGTLEGANVNVVEEMVEMISTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
                ++   +  + + +  +
Sbjct: 241 EMNAKVVSSTDDML-KYLNQV 260


>gi|261821155|ref|YP_003259261.1| flagellar basal body rod protein FlgG [Pectobacterium wasabiae
           WPP163]
 gi|261605168|gb|ACX87654.1| flagellar basal-body rod protein FlgG [Pectobacterium wasabiae
           WPP163]
          Length = 260

 Score =  169 bits (428), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 89/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A +  +  +++N++N  T GF+  +  F +++               
Sbjct: 1   MIRSLWIAKTGLNAQQTNMDVISNNLANVSTNGFKRQRAVFEDLMYQTVRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+F  TG   D A++G  +F ++ P      TRDG F
Sbjct: 61  MLPSGLQLGTGVRPVSTERIHTQGTFSETGNSKDVAIKGQGFFQVQLPDGTTAYTRDGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIP-QKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           ++  +G LV++SG      +                V  K +       I  + L +   
Sbjct: 121 QLDGNGQLVTSSGYQVQPAITVPANATELNIGRDGIVSVKLQGQAATNQIGQLTLTTFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +            + +        + + ++E SN N   E+  MI   + +
Sbjct: 181 DSGLESMGENLYLETASSGAPNESNPGLNGAGLLFQKYVETSNVNVAEELVSMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  I  +++ + +  +
Sbjct: 241 EINSKAISSSDQMLQKLTQ 259


>gi|227328340|ref|ZP_03832364.1| flagellar basal body rod protein FlgG [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
 gi|253688970|ref|YP_003018160.1| flagellar basal-body rod protein FlgG [Pectobacterium carotovorum
           subsp. carotovorum PC1]
 gi|251755548|gb|ACT13624.1| flagellar basal-body rod protein FlgG [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 260

 Score =  169 bits (428), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 89/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A +  +  +++N++N  T GF+  +  F +++               
Sbjct: 1   MIRSLWIAKTGLNAQQTNMDVISNNLANVSTNGFKRQRAVFEDLMYQTVRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+F  TG   D A++G  +F ++ P      TRDG F
Sbjct: 61  MLPSGLQLGTGVRPVSTERIHTQGTFSETGNSKDVAIKGQGFFQVQLPDGTTAYTRDGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIP-QKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           ++  +G LV++SG      +                V  K +       I  + L +   
Sbjct: 121 QLDGNGQLVTSSGYQVQPAITVPANATELNIGRDGIVSVKVQGQAATNQIGQLTLTTFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +            + +        + + ++E SN N   E+  MI   + +
Sbjct: 181 DSGLESMGENLYLETASSGAPNETNPGLNGAGLLYQKYVETSNVNVAEELVSMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  I  +++ + +  +
Sbjct: 241 EINSKAISSSDQMLQKLTQ 259


>gi|161503733|ref|YP_001570845.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160865080|gb|ABX21703.1| hypothetical protein SARI_01818 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 260

 Score =  169 bits (428), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 88/259 (33%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M +S  I      A +  +  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           G+   T    D A++G  +F +  P G    TRDG F
Sbjct: 61  TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGTSAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V  +G LV+A G      +      +         V    +       +  + L +   
Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANALNITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +            + +        + +G++E SN N   E+  MI + + +
Sbjct: 181 DTGLESIGENLYIETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +   ++ + +  +
Sbjct: 241 EINSKAVSTTDQMLQKLTQ 259


>gi|95929874|ref|ZP_01312615.1| Flagellar basal-body rod FlgG [Desulfuromonas acetoxidans DSM 684]
 gi|95134170|gb|EAT15828.1| Flagellar basal-body rod FlgG [Desulfuromonas acetoxidans DSM 684]
          Length = 261

 Score =  169 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 45/261 (17%), Positives = 86/261 (32%), Gaps = 21/261 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +         + +  +  +A+N++N +T GF+  +  F E++  +            
Sbjct: 1   MIRALWTAATGMDSQQTNIDVIANNLANVNTSGFKKSRADFQELLYQVSKTPGSSTSADT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q      +         G  + T  ELD A+EG  +F +E P      TR G  
Sbjct: 61  VSPTGIQVGLGSRTAAVQKVFSTGDMMQTENELDLAIEGRGFFQVEMPDGTTAYTRSGAL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           K   DG L ++ G      +            +   V    +       I  + +     
Sbjct: 121 KKDGDGRLTTSEGYLLTPQIVIPENTTSISIGQDGTVDVFLDGESTSTEIGVIEMAIFSN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +  +  +                T+ +G+LE SN + M EM  MI   + +
Sbjct: 181 ESGLRSLGRNLFAETLSSGVANTGIPGENGLGTLSQGYLEGSNVSVMEEMVNMIAGQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
              +  I   ++ + +   N+
Sbjct: 241 EVNSKAIQTADEML-QMTNNL 260


>gi|189426331|ref|YP_001953508.1| flagellar basal body rod protein [Geobacter lovleyi SZ]
 gi|189422590|gb|ACD96988.1| flagellar basal body rod protein [Geobacter lovleyi SZ]
          Length = 258

 Score =  169 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 58/256 (22%), Positives = 108/256 (42%), Gaps = 14/256 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND-----IDQK 55
           M +     L+  LA  +RL  ++ N++N  T GF+  ++ F  V+   +N          
Sbjct: 1   MNSGMYSALSGNLAAMKRLDVISSNLANASTNGFKQDRLAFESVLAGNRNPPAVPPSQTA 60

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115
              +   +       G+ + TG  LD AL+GD +F + +P G+  TR G F++  DG+L+
Sbjct: 61  DPVLLQERMLTDYSAGTLVQTGNTLDVALQGDGFFVVRTPEGVAYTRQGNFRLASDGTLI 120

Query: 116 SASGKYPVLDMASVPIQIPQKDEI---------FNVGEKGEISQKGKVIATMGLYSVDMS 166
           +A G   +      P                    V  +G I+  G+ +A + L+     
Sbjct: 121 TADGYQVLSKAGERPEDGQPIRIDVAGQDGGGRPVVDSQGGITINGEPVANLALFDFPKP 180

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
               +  ++   P             TV +G LE SN N++ EM QM+  ++ F +   +
Sbjct: 181 YQLTKTASTLFVPAAGTAVQAAGPLTTVAQGALEQSNVNTIAEMVQMVDASRYFETCQRV 240

Query: 227 IDENEKSMLEAIRNIA 242
           +   +    +A+ ++A
Sbjct: 241 VRSFDDMAAKAVNDLA 256


>gi|117926379|ref|YP_866996.1| flagellar basal-body rod protein FlgG [Magnetococcus sp. MC-1]
 gi|117610135|gb|ABK45590.1| flagellar basal-body rod protein FlgG [Magnetococcus sp. MC-1]
          Length = 263

 Score =  169 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 48/260 (18%), Positives = 89/260 (34%), Gaps = 21/260 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +         A +  +  +A+N++NT+T GF+  +  F +++               
Sbjct: 1   MIRALWTSATGMQAQQTNIDVIANNLANTNTAGFKRSRADFQDLLYQNMRAAGAATSQAG 60

Query: 54  -------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGR 105
                  Q    V +         G ++ TG ELD A+EG  +F ++ P      TRDG 
Sbjct: 61  NQVPVGIQLGHGVRTVSVSKMFTQGDYVQTGNELDMAIEGKGFFQIQMPDGSTAYTRDGT 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVD 164
           FK+ + G +V+A G      +                V  K         +  + L    
Sbjct: 121 FKLDNSGQIVTADGYVLDPGLTLPQNATNVAVGPDGTVAVKTPDQADLTQVGQIQLAQFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +  + +                 TV++ +LE SN N + EM  MI   + 
Sbjct: 181 NPAGLNAIGRNLYTESGASGAPVVGTAGEDGLGTVQQQYLELSNVNMVEEMVNMIASQRA 240

Query: 220 FNSITTLIDENEKSMLEAIR 239
           +   +  +   +  + +   
Sbjct: 241 YEINSKTVQTADDMLGKVAS 260


>gi|328545505|ref|YP_004305614.1| flagellar basal-body rod protein FlgG [polymorphum gilvum
           SL003B-26A1]
 gi|326415246|gb|ADZ72309.1| Flagellar basal-body rod protein FlgG [Polymorphum gilvum
           SL003B-26A1]
          Length = 262

 Score =  169 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 89/262 (33%), Gaps = 21/262 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----------- 50
             +  I      A +  +  +A+N++N +T  ++  + +FS+++   +            
Sbjct: 1   MKALAIAATGMSAQQLNVEVIANNIANMNTTAYKRARAEFSDLLYQAERLQGVPNRGGED 60

Query: 51  ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
              +  Q    V +         G+  +T  +LD A++G  WF +  P    + TR G F
Sbjct: 61  PVPEGAQLGLGVKTAAIRKLHMQGTLTNTDNKLDLAIDGRGWFQVTGPEGETLYTRAGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE-KGEISQKGKVIATMGLYSVDM 165
               +G LV+  G      +   P  +            +       + +  + L +   
Sbjct: 121 NKNAEGRLVTLDGYGIEPAILFPPDTVDIIINESGQVFAQVAGELNPRELGQLALTNFAN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +            D          +++G+ E SN + + E+ ++I   + +
Sbjct: 181 DVGLEPVGGNLFRETPASGIGLDGVAGDPGFGVIRQGYQEASNVDPVKEITELISAQRGY 240

Query: 221 NSITTLIDENEKSMLEAIRNIA 242
              + +I   +       + I 
Sbjct: 241 EMNSKVIQAADDMAGTVTKGIR 262


>gi|195940720|ref|ZP_03086102.1| flagellar basal body rod protein FlgG [Escherichia coli O157:H7
           str. EC4024]
 gi|295096223|emb|CBK85313.1| flagellar basal-body rod protein FlgG, Gram-negative bacteria
           [Enterobacter cloacae subsp. cloacae NCTC 9394]
          Length = 260

 Score =  169 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 90/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M +S  I      A +  +  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           G+   T    D A++G  +F ++ P G    TRDG F
Sbjct: 61  TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVQLPDGTSAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V  +G LV+A G      +      +         V    +       +  + L +   
Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGIVSVTQQGQAAPVQVGQLNLTTFMN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +  +         + +        + +G++E SN N   E+  MI + + +
Sbjct: 181 DTGLESIGENLYTETQSSGTPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +   ++ + +  +
Sbjct: 241 EINSKAVSTTDQMLQKLTQ 259


>gi|237731009|ref|ZP_04561490.1| flagellar basal body rod protein FlgG [Citrobacter sp. 30_2]
 gi|226906548|gb|EEH92466.1| flagellar basal body rod protein FlgG [Citrobacter sp. 30_2]
          Length = 260

 Score =  169 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 89/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M +S  I      A +  +  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           G+   T    D A++G  +F +  P G    TRDG F
Sbjct: 61  TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGTSAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V  +G LV+A G      +      +         V    +       +  + L +   
Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANSLSITIGRDGIVSVTQQGQAAPVQVGQLNLTTFMN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +  +         + +        + +G++E SN N   E+  MI + + +
Sbjct: 181 DTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +   ++ + +  +
Sbjct: 241 EINSKAVSTTDQMLQKLTQ 259


>gi|254785374|ref|YP_003072803.1| flagellar basal body rod protein FlgG [Teredinibacter turnerae
           T7901]
 gi|237683455|gb|ACR10719.1| flagellar basal-body rod protein FlgG [Teredinibacter turnerae
           T7901]
          Length = 261

 Score =  169 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 47/261 (18%), Positives = 94/261 (36%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  +      A + +L+TVA+N++N  TVGF+  +  F +++  I+           
Sbjct: 1   MHAALYVSKTGLAAQDTKLTTVANNLANASTVGFKRDRAVFEDLLYQIQRQPGAQNTEDT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                 Q  + V         + GS   T   LD A++G  +F +  P G I  TR G+F
Sbjct: 61  QLPSGLQLGTGVRVVGTQKQFDYGSLQVTNQPLDVAIDGRGFFQILQPDGTIGYTRAGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
            +++ G +V  +G      +                V  +        ++  +       
Sbjct: 121 HLSNQGEIVDPTGLLLQPAITIPDNAESVTIGTDGTVSARIAGVAAPAILGNIQTVDFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +                       V++G LE+SN + + EM  MI   + +
Sbjct: 181 PAGLQAIGGNLFLETAASGNPIQGIPGQNGLGQVEQGMLENSNVDIVEEMVNMITTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
              + ++   ++ +    +N+
Sbjct: 241 EMNSKIVSTADQMLQFVTQNL 261


>gi|187926952|ref|YP_001893297.1| flagellar basal-body rod protein FlgG [Ralstonia pickettii 12J]
 gi|241665281|ref|YP_002983640.1| flagellar basal-body rod protein FlgG [Ralstonia pickettii 12D]
 gi|187728706|gb|ACD29870.1| flagellar basal-body rod protein FlgG [Ralstonia pickettii 12J]
 gi|240867308|gb|ACS64968.1| flagellar basal-body rod protein FlgG [Ralstonia pickettii 12D]
          Length = 260

 Score =  169 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 93/259 (35%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A + +L  +++N++N +T GF+  +  F +++     +         
Sbjct: 1   MIRSLWISKTGMDAQQSQLDVISNNLANVNTTGFKRSRAVFEDLLYQNVREPGAQSSQQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           G+   TG   D A+ G+ +F ++ P G    TRDG F
Sbjct: 61  TLPSGMQIGTGVRIVATERLHTQGNLQQTGNATDVAINGNGFFQVQMPDGTLAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQI-PQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V   G LV++SG      +            +   V      S     + T  L +   
Sbjct: 121 QVNAQGQLVTSSGYPIQPAITVPQNATSFSVGKDGVVTVTTPGSVNNTQVGTFQLANFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +  +           +  +     + + ++E SN N + EM  MI   + +
Sbjct: 181 PAGLRSMGENLYAETEASGTANLANPGSNGVGVLNQNYVETSNVNVVEEMVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ + +  +
Sbjct: 241 EINSKSVQTSDQMLEKLSQ 259


>gi|170768358|ref|ZP_02902811.1| flagellar basal-body rod protein FlgG [Escherichia albertii
           TW07627]
 gi|170123124|gb|EDS92055.1| flagellar basal-body rod protein FlgG [Escherichia albertii
           TW07627]
          Length = 260

 Score =  169 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 88/259 (33%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M +S  I      A +  +  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+   T    D A++G  +F +  P      TRDG F
Sbjct: 61  TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGSSAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V  +G LV+A G      +      +         V    +       +  + L +   
Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQAVPVQVGQLNLTTFMN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +  S         + +        + +G++E SN N   E+  MI + + +
Sbjct: 181 DTGLESIGENLYSETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +   ++ + +  +
Sbjct: 241 EINSKAVSTTDQMLQKLTQ 259


>gi|114706758|ref|ZP_01439658.1| flagellar basal body rod protein [Fulvimarina pelagi HTCC2506]
 gi|114537706|gb|EAU40830.1| flagellar basal body rod protein [Fulvimarina pelagi HTCC2506]
          Length = 240

 Score =  169 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 82/243 (33%), Positives = 144/243 (59%), Gaps = 4/243 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M+TS  + L+ Q+A+E+RL T+A N++N  TVGFR  +V+F E++          ++FV+
Sbjct: 1   METSLPVALSGQIAMEKRLETLAHNIANARTVGFRAEEVRFEELLSHT---APDPVAFVS 57

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
            G+ YLS + G+   TG  LD A+ G+A+FA++   GI+ TRDGR +V+ +G + + +G 
Sbjct: 58  KGETYLSNKSGALTQTGNPLDLAVRGEAFFAIQGDNGIVYTRDGRMQVSPEGMVQTLTG- 116

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
            P+LD     +Q+        +G  G I Q G+ +A +GL+ +       R + SG+  +
Sbjct: 117 RPLLDAGGQALQVDPAGGPLTIGGNGMIHQNGQEVAAVGLFRIPQGANVTRADTSGVVSD 176

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
           +P TP+ +     V +G++E++N N + EM ++I L + F S   ++  N++S+ EAI+ 
Sbjct: 177 VPATPVVEFLTDNVVQGYVEEANVNPVQEMTRLIALQRAFESAANVVQTNDRSLSEAIKA 236

Query: 241 IAS 243
           + S
Sbjct: 237 LGS 239


>gi|261339378|ref|ZP_05967236.1| flagellar basal-body rod protein FlgG [Enterobacter cancerogenus
           ATCC 35316]
 gi|288318179|gb|EFC57117.1| flagellar basal-body rod protein FlgG [Enterobacter cancerogenus
           ATCC 35316]
          Length = 260

 Score =  169 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 90/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M +S  I      A +  +  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           G+   T    D A++G  +F ++ P G    TRDG F
Sbjct: 61  TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQIQLPDGTSAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V  +G LV+A G      +      +         V    +       +  + L +   
Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +  +         + +        + +G++E SN N   E+  MI + + +
Sbjct: 181 DTGLESIGENLYTETQSSGTPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +   ++ + +  +
Sbjct: 241 EINSKAVSTTDQMLQKLTQ 259


>gi|56964026|ref|YP_175757.1| flagellar basal body rod protein FlgG [Bacillus clausii KSM-K16]
 gi|56910269|dbj|BAD64796.1| flagellar hook protein FlgE [Bacillus clausii KSM-K16]
          Length = 267

 Score =  169 bits (427), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 58/264 (21%), Positives = 107/264 (40%), Gaps = 25/264 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--------- 51
           M  S   G++     + +L  V +N++N +T GF+  +V F ++V               
Sbjct: 1   MIRSMYSGISGMKGFQTKLDVVGNNIANVNTHGFKKGRVMFQDMVSQQVQGPMAATPNRG 60

Query: 52  ---IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                Q  S    G        G    TG ELD A+ GD +FA++       TR G    
Sbjct: 61  GVNSKQIGSGSMVGAIDTVHTGGGNQYTGRELDLAINGDGYFAVQIGDDTFYTRAGNIYF 120

Query: 109 TDDGSLVSASGKYPVLDMAS---VPIQIPQKDEIFNVGEKGEIS-----QKGKVIATMGL 160
            ++G++V++SG Y +    +   +   +    E   V ++GEI      Q+  V   +G+
Sbjct: 121 DNEGNVVNSSGAYLLGPDGNRLQIDPALLDDMESTTVNKQGEIIVSIQGQENPVTLQLGI 180

Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIH 215
            +    +G      S  +      P   +   T     ++ G+LE SN +   E  +MI 
Sbjct: 181 ANFANPEGLNSAGGSLFTATPASGPANLVIPGTQGTGDIQSGYLEMSNVDLADEFSEMIV 240

Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239
             + F + + +I  +++ + E + 
Sbjct: 241 AQRGFQANSRIITTSDEILQELVN 264


>gi|295111397|emb|CBL28147.1| flagellar basal-body rod protein FlgG, Gram-negative bacteria
           [Synergistetes bacterium SGP1]
          Length = 268

 Score =  169 bits (427), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 46/262 (17%), Positives = 89/262 (33%), Gaps = 28/262 (10%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS--- 57
           M  +     +  +A +  L  V+ N++N +T G++  +  F +++  +  +    +    
Sbjct: 1   MLRALWSSASGMIAQQTNLDVVSHNLANVNTQGYKKRRADFEDLLYQVWREPGTPVEPNS 60

Query: 58  ----------FVASGKEYLSKEVGSFISTGTELDFALEGDA-------WFALESPRGIIL 100
                                  G F  T  ++D+A+ G         +   +    I  
Sbjct: 61  TVPTGVQVGLGTRVTATPSFMTQGHFQITDNKMDWAIAGQTMAGENAFFQVTQQDGTIAY 120

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIP-QKDEIFNVGEKGEISQKGKVIATMG 159
           TR G +++  DG +VS  G      M         Q      V        + + I  + 
Sbjct: 121 TRAGAWEIDGDGQIVSEDGLLLEPAMVVPENATSVQLTRTGRVMVTIPGQTEPQEIGQLE 180

Query: 160 LYSVDMSQGF------VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQM 213
           L       G       +  E S     I   P ++    TV++G LE SN   + EM  M
Sbjct: 181 LARFINPAGLRALGDRLFLETSASGAPIVGQPGQNG-MPTVRQGVLEMSNVQVVEEMVGM 239

Query: 214 IHLTQKFNSITTLIDENEKSML 235
           I   + + + +  I   ++ + 
Sbjct: 240 IIAQRAYEANSKGIQTADELLR 261


>gi|253990125|ref|YP_003041481.1| flagellar basal-body rod protein flgg [Photorhabdus asymbiotica
           subsp. asymbiotica ATCC 43949]
 gi|253781575|emb|CAQ84738.1| flagellar basal-body rod protein flgg (distal rod protein)
           [Photorhabdus asymbiotica]
          Length = 260

 Score =  169 bits (427), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 41/259 (15%), Positives = 82/259 (31%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A +  +  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAMSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+   T      A+ G  +F ++ P      TRDG F
Sbjct: 61  RLPSGLQIGTGVRPVATERIHSQGNLSGTNNNHHVAIRGKGFFQVQLPDGSSAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           +   +G LV+A+G      +                V  K +     + +    L +   
Sbjct: 121 QEDQNGQLVTANGFLVFPTITIPDNATDIAISSDGVVSVKVQGQSAPQQVGQFTLTTFIN 180

Query: 166 SQGFVRRENSGISPNIP-----PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +                       ++  +LE SN N   E+  MI   + +
Sbjct: 181 ENGLESIGENLYVETSSSGVPIENTPGINGAGLLQHKYLETSNVNIAEELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ + +  +
Sbjct: 241 EVNSKAVSTSDQMLQKLTQ 259


>gi|283833628|ref|ZP_06353369.1| flagellar basal-body rod protein FlgG [Citrobacter youngae ATCC
           29220]
 gi|291071311|gb|EFE09420.1| flagellar basal-body rod protein FlgG [Citrobacter youngae ATCC
           29220]
          Length = 260

 Score =  169 bits (427), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 89/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M +S  I      A +  +  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           G+   T    D A++G  +F +  P G    TRDG F
Sbjct: 61  TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGTSAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V  +G LV+A G      +      +         V    +       +  + L +   
Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGIVSVTQQGQAAPVQVGQLNLTTFMN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +  +         + +        + +G++E SN N   E+  MI + + +
Sbjct: 181 DTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +   ++ + +  +
Sbjct: 241 EINSKAVSTTDQMLQKLTQ 259


>gi|296102906|ref|YP_003613052.1| flagellar basal body rod protein FlgG [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295057365|gb|ADF62103.1| flagellar basal body rod protein FlgG [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 260

 Score =  169 bits (427), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 90/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M +S  I      A +  +  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           G+   T    D A++G  +F ++ P G    TRDG F
Sbjct: 61  TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVQLPDGTSAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V  +G LV+A G      +      +         V    +       +  + L +   
Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +  +         + +        + +G++E SN N   E+  MI + + +
Sbjct: 181 DTGLESIGENLYTETQSSGTPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +   ++ + +  +
Sbjct: 241 EINSKAVSTTDQMLQKLTQ 259


>gi|110632656|ref|YP_672864.1| flagellar basal body rod protein FlgG [Mesorhizobium sp. BNC1]
 gi|110283640|gb|ABG61699.1| flagellar basal-body rod protein FlgG [Chelativorans sp. BNC1]
          Length = 262

 Score =  169 bits (427), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 46/262 (17%), Positives = 95/262 (36%), Gaps = 21/262 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----------- 50
             + +I      A +  L  +A+N++N +T GF+  + +FS+++  ++            
Sbjct: 1   MKALSIAATGMSAQQTNLEVIANNIANINTTGFKRARAEFSDLLYQVERLQGVPERANQN 60

Query: 51  ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
              +       V +         GS  +TG +LD AL G  WF +E   G  + +R G F
Sbjct: 61  IVPEGANIGLGVKTAAVRNVHVQGSLTNTGNKLDMALVGKGWFQIEGADGEPLYSRAGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE-KGEISQKGKVIATMGLYSVDM 165
                G LV+  G      +      +            + +     + +  + L +   
Sbjct: 121 NTNATGQLVTVDGFPVTPAITIPADAVEVIVNKSGQVFARIDGQADLQELGQLTLANFSN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     N+         P            TV++G+LE SN + + E+ ++I   + +
Sbjct: 181 EAGLAPIGNNLFRETPASGPATIGVPGDPGFATVEQGYLEASNVDPVKEITELISAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNIA 242
              + +I   ++      + + 
Sbjct: 241 EMNSKVITAADEMAATVTQAMR 262


>gi|226944494|ref|YP_002799567.1| flagellar basal-body rod protein [Azotobacter vinelandii DJ]
 gi|226719421|gb|ACO78592.1| flagellar basal-body rod protein [Azotobacter vinelandii DJ]
          Length = 260

 Score =  169 bits (427), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 90/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S         + + ++  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MIRSLWTAKTGLESQQVQMDVIANNLANVATNGFKRTRAVFEDLLYQNLRQPGADNTTQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+   T    D A+ G  +F +E P      TRDG F
Sbjct: 61  KLPSGLQIGTGVRPVATERLHSQGNLQGTENSNDLAINGKGFFQVELPDGTTAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           ++ ++G +V++SG   +  +      +     +   V      + +   +  + L     
Sbjct: 121 QLDENGQMVTSSGYLLMGGITIPENALSVTVSQDGIVSVTQPGNAQANQVGQLNLALFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +            +          + +G++E SN N + EM  MI   + +
Sbjct: 181 PAGLQSVGENLYLETASSGAPNENIPGTNGAGRLYQGYVETSNVNVVEEMVSMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  ++ +++ +    +
Sbjct: 241 EINSKAVETSDEMLARLTQ 259


>gi|291288379|ref|YP_003505195.1| flagellar basal-body rod protein FlgG [Denitrovibrio acetiphilus
           DSM 12809]
 gi|290885539|gb|ADD69239.1| flagellar basal-body rod protein FlgG [Denitrovibrio acetiphilus
           DSM 12809]
          Length = 262

 Score =  169 bits (427), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 45/261 (17%), Positives = 90/261 (34%), Gaps = 21/261 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +         A +  + T+++N++N + +G++  +  F +++               
Sbjct: 1   MFRTLWTAATGMTAQQTNIDTISNNLANVNNIGYKKSRAHFEDLIYQELKPAGAISAAGM 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q                GSF  TG  LD A+EGD +F    P   I  TR+G  
Sbjct: 61  THPTGIQVGLGSKVAAIEKVHTQGSFQYTGVSLDIAVEGDGYFQFTLPSGEIAYTRNGSL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165
           K   DG+LV+++G Y    +                        ++ + I  + L     
Sbjct: 121 KTDADGNLVNSNGYYLEPAVTVPDDVTDIAFGEDGTISVTLAGEEEAQEIGQIELSRFIN 180

Query: 166 SQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +   P             +    ++ +  LE SN + + EM  MI   + +
Sbjct: 181 PAGLKAIGKNLFMPTGASGNAVAGVPSEDGYGSITQNTLEMSNVSVVDEMVNMITGQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
              +  +   ++ + + + N+
Sbjct: 241 EINSKAVQTGDEML-QIVNNL 260


>gi|160896077|ref|YP_001561659.1| flagellar basal-body rod protein FlgG [Delftia acidovorans SPH-1]
 gi|160361661|gb|ABX33274.1| flagellar basal-body rod protein FlgG [Delftia acidovorans SPH-1]
          Length = 260

 Score =  169 bits (427), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 89/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S  I      A + +L  ++ N++N  T G++     F +++         +     
Sbjct: 1   MINSLFISKTGMEAQQTQLDVISHNLANVSTTGYKRASAVFEDLIYQNLRQSGAQTTEQN 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                      V +     +   G+   +   LD A++G+ +F +  P      TRDG F
Sbjct: 61  QLPTGLHLGLGVRTVATSRNFLQGALQQSNNALDVAIDGNGFFQVNMPDGTTAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           +V   G LV+ASG      +                V          + +  + +     
Sbjct: 121 QVDAQGQLVTASGMPIANGVTIPQGATKVSISPEGVVSVTMAGQAAPQQVGNIAMSQFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   R  +  +        +           +K+G+LE SN N + E+  MI   + +
Sbjct: 181 PAGLEPRGQNLFTETASSGQPQQGQPGVNGMGMIKQGYLEGSNVNVVQELVTMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  I  +++ + +  +
Sbjct: 241 EMNSKAIQTSDQMLAKLAQ 259


>gi|205353083|ref|YP_002226884.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|205272864|emb|CAR37793.1| flagellar basal-body rod protein FlgG (distal rod protein)
           [Salmonella enterica subsp. enterica serovar Gallinarum
           str. 287/91]
 gi|326628163|gb|EGE34506.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
          Length = 260

 Score =  169 bits (427), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 87/259 (33%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M +S  I      A +  +  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           G+   T    D A++G  +F +  P G    TRDG F
Sbjct: 61  TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGTSAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V  +G LV+A G      +      +         V    +       +  + L +   
Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +            + +        + +G++E SN N   E+  MI + + +
Sbjct: 181 DTGLESIGENLYIETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
                 +   ++ + +  +
Sbjct: 241 EINCKAVSTTDQMLQKLTQ 259


>gi|307627452|gb|ADN71756.1| flagellar basal body rod protein FlgG [Escherichia coli UM146]
          Length = 260

 Score =  169 bits (427), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 88/259 (33%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M +S  I      A +  +  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+   T    D A++G  +F +  P      TRDG F
Sbjct: 61  TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGSSAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V  +G LV+A G      +      +         V    +       +  + L +   
Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +  +         + +        + +G++E SN N   E+  MI + + +
Sbjct: 181 DTGLESIGENLYTETQSSCAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +   ++ + +  +
Sbjct: 241 EINSKAVSTTDQMLQKLTQ 259


>gi|300716220|ref|YP_003741023.1| flagellar basal-body rod protein [Erwinia billingiae Eb661]
 gi|299062056|emb|CAX59172.1| Flagellar basal-body rod protein [Erwinia billingiae Eb661]
          Length = 260

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 88/259 (33%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A +  +  +++N++N  T GF+  +  F +++               
Sbjct: 1   MIRSLWIAKTGLDAQQTNMDVISNNLANVSTNGFKRQRAVFEDLMYQTIRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           G+   T +  D A+ G  +F ++ P G    TRDG F
Sbjct: 61  TLPSGMQLGTGVRPVATERLHTQGNLNKTDSSKDVAISGQGYFQVQMPDGTLAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +   +G LV+  G      +      +         V    +   +   +  + L +   
Sbjct: 121 QTDQNGQLVTNGGFPVQPAITVPANALSMTIGRDGVVSVTQQGQTQPVQVGQLTLSTFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   +  +            D +        + +G++E SN N   E+  MI   + +
Sbjct: 181 DAGLESKGENLYQETQASGAPTDSTPGNNGAGLLYQGYVETSNVNVAEELVSMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  I  +++ + +  +
Sbjct: 241 EINSKAISTSDQMLAKLTQ 259


>gi|261886055|ref|ZP_06010094.1| flagellar basal body rod protein FlgG [Campylobacter fetus subsp.
           venerealis str. Azul-94]
          Length = 262

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 47/261 (18%), Positives = 100/261 (38%), Gaps = 21/261 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S        +A + ++ T + N++N +T+G++  + +F++++               
Sbjct: 1   MIRSLYTAATGMVAQQTQIDTTSHNIANVNTIGYKKNRAEFADLMYQTMQYAGTPTSTTT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 +    V           G F  TG  LD  + G+ +F ++ P      TR+G F
Sbjct: 61  MSPTGMEVGLGVRPTAITKVFGQGYFKETGNNLDMVIAGNGFFQIQLPDGTTAYTRNGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           K+  DGS+V++ G   + +M            +   V      +Q+   I  + L +   
Sbjct: 121 KLDGDGSIVNSDGYRLLPEMNIPADATQISVGVDGTVSVLQPGNQEMTQIGQIELANFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++              +G T     +K+GF+E SN   + EM  +I   + +
Sbjct: 181 PSGLHAMGDNNFLETAASGAPNIGNGGTDGFGQIKQGFVEMSNVQLVEEMTDLITGQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
            + +  I   ++ + + +  +
Sbjct: 241 EANSKAITTADEML-QTVNQL 260


>gi|290474974|ref|YP_003467858.1| flagellar basal body rod cell-distal protein [Xenorhabdus bovienii
           SS-2004]
 gi|289174291|emb|CBJ81081.1| flagellar biosynthesis; cell-distal portion of basal-body rod
           [Xenorhabdus bovienii SS-2004]
          Length = 260

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 93/259 (35%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A +  +  +A+N++N  T GF+  +  F +++   +           
Sbjct: 1   MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTERQPGAMSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                 Q  + V           G+   T    D A++G  +F ++ P G    TRDG F
Sbjct: 61  NLPSGLQIGTGVRPVATERLHSQGNLAQTNNSNDVAIKGQGFFQIQMPDGTTGYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQI-PQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +   +G LV+A G   V  +                V    +     + +  + L +   
Sbjct: 121 QKDQNGQLVTAGGFQVVPAIIIPDNATKMSIARDGIVSINVQGQNAPQQVGQLTLTTFIN 180

Query: 166 SQGFVRRENSGI-SPNIPPTPLEDLS----GVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +     N    P+E+         + +G++E SN N   E+  MI + + +
Sbjct: 181 ESGLESIGENLYLETNSSGVPVENAPGINGAGLLYQGYVETSNVNVAEELVNMIQVQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ + +  +
Sbjct: 241 EINSKAVSTSDQMLQKLTQ 259


>gi|218549194|ref|YP_002382985.1| flagellar basal body rod protein FlgG [Escherichia fergusonii ATCC
           35469]
 gi|218356735|emb|CAQ89363.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia fergusonii ATCC 35469]
 gi|324113873|gb|EGC07847.1| flagellar basal-body rod protein FlgG [Escherichia fergusonii B253]
 gi|325497614|gb|EGC95473.1| flagellar basal body rod protein FlgG [Escherichia fergusonii
           ECD227]
          Length = 260

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 87/259 (33%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M +S  I      A +  +  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+   T    D A++G  +F +  P      TRDG F
Sbjct: 61  TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGSSAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V  +G LV+A G      +      +         V    +       +  + L +   
Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +            + +        + +G++E SN N   E+  MI + + +
Sbjct: 181 DTGLESIGENLYVETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +   ++ + +  +
Sbjct: 241 EINSKAVSTTDQMLQKLTQ 259


>gi|157146224|ref|YP_001453543.1| flagellar basal body rod protein FlgG [Citrobacter koseri ATCC
           BAA-895]
 gi|157083429|gb|ABV13107.1| hypothetical protein CKO_01981 [Citrobacter koseri ATCC BAA-895]
          Length = 260

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 89/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M +S  I      A +  +  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           G+   T    D A++G  +F +  P G    TRDG F
Sbjct: 61  TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGTSAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V  +G LV+A G      +      +         V    +       +  + L +   
Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANSLSITVGRDGVVSVTQQGQAAPVQVGQLNLTTFMN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +  +         + +        + +G++E SN N   E+  MI + + +
Sbjct: 181 DTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +   ++ + +  +
Sbjct: 241 EINSKAVSTTDQMLQKLTQ 259


>gi|242238971|ref|YP_002987152.1| flagellar basal-body rod protein FlgG [Dickeya dadantii Ech703]
 gi|242131028|gb|ACS85330.1| flagellar basal-body rod protein FlgG [Dickeya dadantii Ech703]
          Length = 260

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 84/259 (32%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A +  +  +++N++N  T GF+  +  F +++               
Sbjct: 1   MIRSLWIAKTGLDAQQTNMDVISNNLANVSTNGFKRQRAVFEDLLYQTVRQPGAQSSDQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+   T    D A+ G  +F +  P      TRDG F
Sbjct: 61  NLPSGLQLGTGVRPVSTERLHSQGNLEQTENTKDIAINGQGFFEVLMPDGTTAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           ++  +G LV+ASG      +      Q         V    +       +  + L +   
Sbjct: 121 QLDANGQLVTASGYTVQPAITIPTTAQTMTVARDGTVSVTLQGQTASTQVGQLTLSTFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +              +        + +G++E SN N   E+  MI + + +
Sbjct: 181 PAGLQSLGENLYQETQSSGAPTQSTPGQNGAGVLYQGYVETSNVNVAEELVSMIQVQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  ++  +    +
Sbjct: 241 EINSKAVSTSDSMLQRLTQ 259


>gi|224532206|ref|ZP_03672838.1| flagellar hook-basal body complex protein [Borrelia valaisiana
           VS116]
 gi|224511671|gb|EEF82077.1| flagellar hook-basal body complex protein [Borrelia valaisiana
           VS116]
          Length = 282

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 50/280 (17%), Positives = 102/280 (36%), Gaps = 38/280 (13%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51
           M        +  +A  ++L  V++N++N D VG++        F E++    ND      
Sbjct: 1   MVRGIYTAASGMMAERRKLDVVSNNLANIDLVGYKKDLSIQKAFPEMLIRRLNDDGLYKF 60

Query: 52  ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101
                     + +  + V   + Y   E G   +TG  LD AL    +F +++  G   T
Sbjct: 61  PKGHLETAPIVGKLGTGVEENEIYTLFEQGPLKTTGNPLDLALTDQGFFVIQTSDGERYT 120

Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV------- 154
           R+G F +  +G LV+ SG   + +   + ++                S +          
Sbjct: 121 RNGSFTIGKEGILVTKSGFPVLGEKGYIYLKKNNFKITPQGQIFHNSSFESNPKRLVSEY 180

Query: 155 ---------IATMGLYSVDMSQGFVRRENSGIS---PNIPPTPLEDLSGVTVKRGFLEDS 202
                    + T+ + + +  +   ++ NS       +     ++      ++   LE S
Sbjct: 181 ENSWENYELLDTIRIVNFENPRFLKKQGNSLWIDTKTSGKAQEMDISLRPKIETETLEAS 240

Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           N N + EM  MI + + + +    I   +  + + I  I 
Sbjct: 241 NVNPVKEMVLMIEINRAYEANQKTIQTEDNLLGKLINEIG 280


>gi|146307867|ref|YP_001188332.1| flagellar basal body rod protein FlgG [Pseudomonas mendocina ymp]
 gi|145576068|gb|ABP85600.1| flagellar basal-body rod protein FlgG [Pseudomonas mendocina ymp]
          Length = 261

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 48/261 (18%), Positives = 98/261 (37%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  +      A +  L+T+++N++N  T GF+  + +F +++  I+           
Sbjct: 1   MLPALWVSKTGLSAQDMNLTTISNNLANVATTGFKRDRAEFEDLLYQIRRQPGGQSSQDS 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                 Q  + V           GS  +T   LD A+ G  +F +  P G +  TRDG F
Sbjct: 61  ELPSGLQLGTGVRVVGTQKIFTAGSLQTTEQPLDMAINGRGFFQILQPDGTVSYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
            +  DG +V++ G      +      +     E   V      + + ++I  + L     
Sbjct: 121 HLNSDGQIVTSQGFALEPAIVLPNEVRTFTVGEDGTVSVTTAGNPQPQIIGNIQLADFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     N+           +  +       T  +  LE+SN + + E+  MI   + +
Sbjct: 181 PAGLEAIGNNLFLETGSSGAPQVGNPGLNGLGTTLQNTLENSNVSVVEELVNMITTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
              + +I   ++ +    +N+
Sbjct: 241 EMNSKVISTADQMLSFVTQNL 261


>gi|218689031|ref|YP_002397243.1| flagellar basal body rod protein FlgG [Escherichia coli ED1a]
 gi|218426595|emb|CAR07423.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli ED1a]
          Length = 260

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 88/259 (33%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M +S  I      A +  +  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+   T    D A++G  +F +  P      TRDG F
Sbjct: 61  TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGSSAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V  +G LV+A G      +      +         V    +       +  + L +   
Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +  +         + +        + +G++E SN N   E+  MI + + +
Sbjct: 181 DTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVEMSNVNVAEELVNMIQVQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +   ++ + +  +
Sbjct: 241 EINSKAVSTTDQMLQKLTQ 259


>gi|51246533|ref|YP_066417.1| flagellar hook basal body protein (FlgG) [Desulfotalea psychrophila
           LSv54]
 gi|50877570|emb|CAG37410.1| probable flagellar hook basal body protein (FlgG) [Desulfotalea
           psychrophila LSv54]
          Length = 261

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 51/262 (19%), Positives = 95/262 (36%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S   G     A +  +  +A+N++N +T GF+     F +++         +     
Sbjct: 1   MFRSLWTGTTGMQAQQLNIDIIANNLANVNTTGFKKSSADFQDLLYQTMKVPGSQTSPDT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                      V           G  I T  ELD A++G  +F +E+P   I  TR G F
Sbjct: 61  ESPTGILVGLGVKPAAVTKVFTQGDLIQTENELDVAIQGRGFFQIEAPDGNIKYTRAGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVP-IQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           K   +G + S+ G   + ++      +     E   V  K +       I T+ L     
Sbjct: 121 KRDSNGRMTSSDGYPLIPEITIPSGAKQVSIGETGIVSVKLDSDSTETEIGTIELAGFTN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +                      T+ + +LE SN N + EM  MI   + +
Sbjct: 181 PAGLAAIGKNLFEETGASGTATIGIPGEEGYGTLIQQYLEGSNVNLVAEMAAMISTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNIA 242
              ++++  +++ M + + ++A
Sbjct: 241 EINSSMVKTSDQMM-QTVNDLA 261


>gi|203284669|ref|YP_002222409.1| flagellar hook-basal body complex protein [Borrelia duttonii Ly]
 gi|201084112|gb|ACH93703.1| flagellar hook-basal body complex protein [Borrelia duttonii Ly]
          Length = 282

 Score =  168 bits (426), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 50/280 (17%), Positives = 102/280 (36%), Gaps = 38/280 (13%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKND------ 51
           M        +  +A   RL  +A+N++N D  G++        F E++    ND      
Sbjct: 1   MVRGIYTAASGMIAQRHRLEVIANNLANIDLTGYKKDLSVQKAFPEMLIRRTNDDGLYKF 60

Query: 52  ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101
                     + +  + V   + Y S E G    TG  LD AL  + +F +++P G   T
Sbjct: 61  PKGYLETAPVVGKLGTGVEENEIYTSFEQGPLKITGNPLDLALTEEGFFVVQTPEGERYT 120

Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV------- 154
           R+G F +  +G L++  G   + +   + I+                + +          
Sbjct: 121 RNGSFTLGREGILITKDGYPVIGEKGYIHIKDNNFKITEQGQIFHNSTFESNPKRLVSES 180

Query: 155 ---------IATMGLYSVDMSQGFVRRENSGISPNI---PPTPLEDLSGVTVKRGFLEDS 202
                    +  + + + + ++   ++ +S             +   S   ++ G LE S
Sbjct: 181 ENSWENYELLDNLKIVNFEKARFLKKQGSSLWYSTEISGQAKNIPINSRPKIESGVLECS 240

Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           N N++ EM  MI + + + +    I   +  + + I  I 
Sbjct: 241 NVNAINEMVSMITVNRVYEANQKTIQTEDTLLGKLINEIG 280


>gi|86356312|ref|YP_468204.1| flagellar basal body rod protein FlgG [Rhizobium etli CFN 42]
 gi|86280414|gb|ABC89477.1| flagellar basal-body rod protein [Rhizobium etli CFN 42]
          Length = 262

 Score =  168 bits (426), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 44/261 (16%), Positives = 91/261 (34%), Gaps = 21/261 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----------- 50
             +  I      A +  L  +A+N++N +T GF+  + +F++++   +            
Sbjct: 1   MRALAIAATGMDAQQTNLEVIANNIANINTTGFKRARAEFTDLLYQTERAKGVANRANQA 60

Query: 51  ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRF 106
              +       V +         G    TG +LD AL G  +F ++ +    + TR G F
Sbjct: 61  VVPEGANIGLGVQTSAVRNLHLQGELTQTGNDLDVALIGKGFFQIQSTDGTTLYTRAGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
              D G LV+  G   +  +                V  K        V+  + L     
Sbjct: 121 NKNDQGQLVTIDGYEVLPGITIPQGSTELTISRSGEVSAKLPGQTDPTVLGQLTLADFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++              +        +K+G+LE SN + + E+ ++I   + +
Sbjct: 181 EAGLQPIGDNLFQETPASGEAVVGNPDEEGFAYMKQGYLESSNVDPVKEITELISAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
              + +I   ++      +N+
Sbjct: 241 EMNSKVITTADEMASIVSKNL 261


>gi|13472576|ref|NP_104143.1| flagellar basal body rod protein FlgG [Mesorhizobium loti
           MAFF303099]
 gi|14023322|dbj|BAB49929.1| flagellar basal body distal rod protein; FlgG [Mesorhizobium loti
           MAFF303099]
          Length = 262

 Score =  168 bits (426), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 44/262 (16%), Positives = 91/262 (34%), Gaps = 21/262 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             +  I      A +  L  +A+N++N +T G++  + +FS+++  +             
Sbjct: 1   MKALAIAATGMNAQQTNLEVIANNIANINTTGYKRARAEFSDLLYQVDRTQGVPNRSNAS 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRF 106
                      V +         G   STG   D AL G  WF +E +  G + TR G F
Sbjct: 61  LVPEGVSIGLGVKTTAVRNVHTQGELTSTGNSFDMALTGRGWFQIEGADGGTLYTRAGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE-KGEISQKGKVIATMGLYSVDM 165
                G LV+  G   +  +      +            + +     + +  + + +   
Sbjct: 121 NTNATGQLVTVDGANVIPAITVPTDAVEVIVNKTGQVFARIDGQTNLQTLGQLQIVNFAN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++         P            T+++G+LE SN + + E+ ++I   + +
Sbjct: 181 EAGLAPLGDNLFQETTASGPANAGVPGDPGFATIQQGYLEASNVDPVKEITELISAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNIA 242
              + +I   +       +NI 
Sbjct: 241 EMNSKVIQAADDMASVVSKNIR 262


>gi|323703191|ref|ZP_08114844.1| fagellar hook-basal body protein [Desulfotomaculum nigrificans DSM
           574]
 gi|323531850|gb|EGB21736.1| fagellar hook-basal body protein [Desulfotomaculum nigrificans DSM
           574]
          Length = 260

 Score =  168 bits (426), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 52/258 (20%), Positives = 104/258 (40%), Gaps = 18/258 (6%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             +   G +   A + +L T+ +N++N +T  ++  +++F+E++     D          
Sbjct: 3   IKTLATGASGMRAFQMKLDTIGNNIANINTTAYKRSRIEFAEMMRQAMGDQGIPAASDPR 62

Query: 54  -QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR--GIILTRDGRFKVTD 110
               S V         E G  + TG +LD A+EG+ +F + SP       TRDG F + +
Sbjct: 63  PAGGSGVKMVSVARLVEQGDLLQTGRDLDLAIEGEGYFKVISPEDDREYYTRDGCFYLNN 122

Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-IATMGLYSVDMSQGF 169
           +G +V+A+G     ++                  +G+ ++     I  + LY+       
Sbjct: 123 EGVVVNANGYKLEPEINLKDGNYVAIRIDEKGKVQGKTAEGDFQDIDEITLYTFPAPANL 182

Query: 170 VRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224
           +   N+  SP        + +        +++G+LE SN +   EM  MI   + + +  
Sbjct: 183 LDEGNNLYSPTTASGEATEGTPGEDGVGLIRQGYLERSNVDLAQEMLGMIEAQRAYAANA 242

Query: 225 TLIDENEKSMLEAIRNIA 242
             I   ++    A  N+ 
Sbjct: 243 RTIQTADEMWDRA-NNLR 259


>gi|332342624|gb|AEE55958.1| flagellar basal-body rod protein FlgG [Escherichia coli UMNK88]
          Length = 260

 Score =  168 bits (425), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 88/259 (33%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M +S  I      A +  +  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+   T    D A++G  +F +  P      TRDG F
Sbjct: 61  TLPSGLQIGTGVRPVTTERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGSSAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V  +G LV+A G      +      +         V    +       +  + L +   
Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +  +         + +        + +G++E SN N   E+  MI + + +
Sbjct: 181 DTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +   ++ + +  +
Sbjct: 241 EINSKAVSTTDQMLQKLTQ 259


>gi|111115607|ref|YP_710225.1| flagellar hook-basal body complex protein [Borrelia afzelii PKo]
 gi|216263707|ref|ZP_03435702.1| flagellar hook-basal body complex protein [Borrelia afzelii ACA-1]
 gi|110890881|gb|ABH02049.1| flagellar hook-basal body complex protein [Borrelia afzelii PKo]
 gi|215980551|gb|EEC21372.1| flagellar hook-basal body complex protein [Borrelia afzelii ACA-1]
          Length = 282

 Score =  168 bits (425), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 48/280 (17%), Positives = 104/280 (37%), Gaps = 38/280 (13%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51
           M        +  +A  ++L  V++N++N D +G++        F E++    ND      
Sbjct: 1   MVRGIYTAASGMMAERRKLDVVSNNLANIDLIGYKKDLSIQKAFPEMLIRRLNDDGLYKF 60

Query: 52  ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101
                     + +  + V   + Y   E G   +TG  LD AL    +F +++  G   T
Sbjct: 61  PKGHLETAPIVGKLGTGVEENEIYTLFEQGPLKTTGNPLDLALTDQGFFVIQTSDGERYT 120

Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI------------- 148
           R+G F +  +G LV+ SG   + +   + ++                             
Sbjct: 121 RNGSFTIGKEGILVTKSGFPVLGEKGYIYLKKNNFKITPQGQIFHNSNFESNPRRLVSEH 180

Query: 149 ---SQKGKVIATMGLYSVDMSQGFVRRENSGIS---PNIPPTPLEDLSGVTVKRGFLEDS 202
               +  +++ T+ + + +  +   ++ NS       +     ++      ++   LE S
Sbjct: 181 ENSWENYELLDTIRIVNFENPRFLKKQGNSLWIDTKTSGKAQEIDVSLRPKIETEALEAS 240

Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           N N++ EM  MI + + + +    I   +  + + I  I 
Sbjct: 241 NVNAVKEMVLMIEINRAYEANQKTIQTEDSLLGKLINEIG 280


>gi|330721006|gb|EGG99167.1| Flagellar basal-body rod protein FlgG [gamma proteobacterium
           IMCC2047]
          Length = 261

 Score =  168 bits (425), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 48/261 (18%), Positives = 94/261 (36%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A +Q L+++++N++N  T G++  +  F +++  +            
Sbjct: 1   MLASLWISKTGLSAQDQALASISNNLANVSTTGYKRERAVFQDLLYPVHTQPGAQSSQST 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                 Q  + V +         GS   T   LD A+ G  +F +  P G     RDG+F
Sbjct: 61  QLPSGLQTGTGVKTVATQKLHTNGSLEVTDQPLDIAINGRGYFQVLLPDGETGYARDGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQKGKVIATMGLYSVDM 165
           ++  DG +V++ G      +      +        V       S     I  + L     
Sbjct: 121 QLNSDGVIVNSQGFELQPSITVPANTLNITIGSDGVISATVAGSSTPTQIGDIQLAEFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +                      T+++G LE+SN N + E+  MI   + +
Sbjct: 181 PTGLQAIGGNLYKETAASGTPTTGTPGLSGRGTIEQGVLENSNVNIVEELVDMITTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
              T +I  +++ +    +++
Sbjct: 241 EMNTKVISTSDQMLQFVTQSL 261


>gi|34498338|ref|NP_902553.1| flagellar basal-body rod protein FlgG [Chromobacterium violaceum
           ATCC 12472]
 gi|34104192|gb|AAQ60551.1| flagellar basal-body rod protein FlgG [Chromobacterium violaceum
           ATCC 12472]
          Length = 260

 Score =  168 bits (425), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 49/259 (18%), Positives = 92/259 (35%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  I        + +L  V++N++N +TVGF+  +  F ++                
Sbjct: 1   MMRALYIAKTGMDTSQFQLDVVSNNLANVNTVGFKKSRGIFEDLYYQTLRQPGGQLANGN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  +  A+         G    TG  LD  ++GD +F L  P      +R+G+F
Sbjct: 61  ANPTGLQVGTGAAAVASSRIFTQGPPQQTGQPLDLQIQGDGFFRLLQPDGTTAYSRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165
           +   +G++V+  G     ++               V +     S   +   T+ L +   
Sbjct: 121 QRDANGNVVNPDGLPLNPNINIPATAQQITVSSAGVVQYTLAGSAAPQTAGTILLTTFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
            QG     N+           +D +        +K GFLE SN N   E+  MI   + F
Sbjct: 181 PQGLQSIGNNLYLQTAASGDPQDGNPQTDDRGAIKSGFLESSNVNVTEELVNMITAQRSF 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +   ++ + +   
Sbjct: 241 EMNSRAVTTADQMLQKLSN 259


>gi|253998486|ref|YP_003050549.1| flagellar basal-body rod protein FlgG [Methylovorus sp. SIP3-4]
 gi|313200561|ref|YP_004039219.1| flagellar basal-body rod protein flgg [Methylovorus sp. MP688]
 gi|253985165|gb|ACT50022.1| flagellar basal-body rod protein FlgG [Methylovorus sp. SIP3-4]
 gi|312439877|gb|ADQ83983.1| flagellar basal-body rod protein FlgG [Methylovorus sp. MP688]
          Length = 260

 Score =  168 bits (425), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 87/259 (33%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A + ++  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MIRSLWISKTGLDAQQTQMDVIANNLANVSTNGFKRSRAVFEDLLYQNIRQPGAQSSQQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+   T    D A+ G+ +F +  P      TRDG F
Sbjct: 61  QLPSGMQLGTGVKPVATERIFSQGNLQQTENAKDLAINGEGFFQVLLPDGSTAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V + G +V+ASG      +                V      S     I T+ L +   
Sbjct: 121 QVDNQGQMVTASGYTIQPAITIPANAQSITVGRDGTVSVTLPNSVATTQIGTIQLATFIN 180

Query: 166 SQGFVRRENSGISP-----NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   +  +                       + +G++E SN N + E+  MI   + +
Sbjct: 181 PAGLQSKGENLYVETSASGTASTNTPGANGAGVLNQGYVETSNVNVVEELVSMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  I  +++ +    +
Sbjct: 241 EINSKAITTSDQMLQRLSQ 259


>gi|302037628|ref|YP_003797950.1| flagellar basal-body rod protein FlgG [Candidatus Nitrospira
           defluvii]
 gi|300605692|emb|CBK42025.1| Flagellar basal-body rod protein FlgG [Candidatus Nitrospira
           defluvii]
          Length = 263

 Score =  168 bits (425), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 52/263 (19%), Positives = 100/263 (38%), Gaps = 22/263 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +         A +  + T+A+N++N +T  F+  + +F +++  I+       S V 
Sbjct: 1   MIRAMWTAATGMTAQQLNVDTIANNLANVNTNAFKRSRAEFGDLLYQIQRLPGTNASNVG 60

Query: 61  SGKEYL-------------SKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                +                 G+   TG +LD A++G  +F +  P   I+ TR+G F
Sbjct: 61  VFPVGVQVGGGVRPITVAKEWVQGNMRQTGNDLDLAIDGAGFFQVTRPDGTIMYTRNGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           K  + G+LV+  G      +      +     +   V        +   +  + L   D 
Sbjct: 121 KRDNVGNLVTGDGDQLNPVITIPSGALKIDVGQDGTVSVLLPGVTQASQVGQIQLVRFDN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT------VKRGFLEDSNANSMYEMGQMIHLTQK 219
             G V    +    +    P +  +G        +++GFLE SN N   EM  MI   + 
Sbjct: 181 PSGLVAMGGNLFLDSFASGPAQQGTGGFSTGFGTLQQGFLESSNVNLAEEMVNMIIAQRS 240

Query: 220 FNSITTLIDENEKSMLEAIRNIA 242
           +   +  I  +++ M +   N+ 
Sbjct: 241 YEINSKTIQASDEMM-QIANNLR 262


>gi|190890363|ref|YP_001976905.1| flagellar basal-body rod protein [Rhizobium etli CIAT 652]
 gi|218516082|ref|ZP_03512922.1| flagellar basal body rod protein FlgG [Rhizobium etli 8C-3]
 gi|190695642|gb|ACE89727.1| flagellar basal-body rod protein [Rhizobium etli CIAT 652]
          Length = 262

 Score =  168 bits (425), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 44/261 (16%), Positives = 92/261 (35%), Gaps = 21/261 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----------- 50
             +  I      A +  L  +A+N++N +T GF+  + +F++++   +            
Sbjct: 1   MRALAIAATGMDAQQTNLEVIANNIANINTTGFKRARAEFTDLLYQTERAKGVANRANQA 60

Query: 51  ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRF 106
              +       V +         G    TG +LD AL G  +F ++ +    + TR G F
Sbjct: 61  VVPEGANIGLGVQTSAVRNLHLQGELTQTGNDLDVALIGKGFFQIQSTDGTTLYTRAGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
              D G LV+  G   +  +                V  K   +    V+  + L     
Sbjct: 121 NKNDQGQLVTVDGYEVLPGITIPTGSTELTISRSGEVSVKLPGATDTTVLGQLTLADFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++              +        +K+G+LE SN + + E+ ++I   + +
Sbjct: 181 EAGLQPIGDNLFQETAASGEAVVGNPDEEGFAYMKQGYLESSNVDPVKEITELISAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
              + +I   ++      +N+
Sbjct: 241 EMNSKVITTADEMASIVSKNL 261


>gi|261344140|ref|ZP_05971784.1| flagellar basal-body rod protein FlgG [Providencia rustigianii DSM
           4541]
 gi|282567732|gb|EFB73267.1| flagellar basal-body rod protein FlgG [Providencia rustigianii DSM
           4541]
          Length = 260

 Score =  168 bits (425), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 88/259 (33%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A +  L  +++N++N  T GF+  +  F +++               
Sbjct: 1   MIRSLWIAKTGLDAQQTNLDVISNNLANVSTNGFKRQRAVFEDLLYQNIRQPGAMSSDQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  +             G+   TGT  D A++G  +  ++ P G    TRDG  
Sbjct: 61  SLPSGLQMGTGARPVATMRIHSQGNLNKTGTTTDIAIKGQGFLHVQMPDGTDAYTRDGAL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +   DG LV++SG   V  +                V        + + I  + L +   
Sbjct: 121 QPNQDGQLVTSSGYQVVPAIMIPENANSLSIARDGTVSVTVYGDNQPQQIGQITLTTFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +           ++ +  T     + +G LE SN N   E+  MI   + +
Sbjct: 181 DAGLESMGENLYMETASSGAPKESAPGTNGAGLLYQGMLETSNVNVAEELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ +    +
Sbjct: 241 EINSKAVSASDQMLQRLTQ 259


>gi|209547928|ref|YP_002279845.1| flagellar basal body rod protein FlgG [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209533684|gb|ACI53619.1| flagellar basal-body rod protein FlgG [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 262

 Score =  168 bits (425), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 45/261 (17%), Positives = 92/261 (35%), Gaps = 21/261 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----------- 50
             +  I      A +  L  +A+N++N +T GF+  + +FS+++   +            
Sbjct: 1   MRALAIAATGMDAQQTNLEVIANNIANINTTGFKRARAEFSDLLYQTERAKGVANRANQA 60

Query: 51  ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRF 106
              +       V +         G    TG +LD AL G  +F ++ +    + TR G F
Sbjct: 61  VVPEGANIGLGVQTSAVRNLHLQGELTQTGNDLDVALIGKGFFQIQSTDGTTLYTRAGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
              D G LV+  G   +  +                V  K   +    V+  + L     
Sbjct: 121 NKNDQGQLVTIDGYEVLPGITIPTGSTELTISRSGQVSAKLPGAADATVLGQLTLADFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++              +        +K+G+LE SN + + E+ ++I   + +
Sbjct: 181 EAGLQPLGDNLFQETAASGEAVVGNPDEEGFAYMKQGYLESSNVDPVKEITELISAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
              + +I   ++      +N+
Sbjct: 241 EMNSKVITTADEMASIVSKNL 261


>gi|15801195|ref|NP_287212.1| flagellar basal body rod protein FlgG [Escherichia coli O157:H7
           EDL933]
 gi|15830710|ref|NP_309483.1| flagellar basal body rod protein FlgG [Escherichia coli O157:H7
           str. Sakai]
 gi|16129041|ref|NP_415596.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli str. K-12 substr. MG1655]
 gi|26247218|ref|NP_753258.1| flagellar basal body rod protein FlgG [Escherichia coli CFT073]
 gi|89107924|ref|AP_001704.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli str. K-12 substr. W3110]
 gi|91210230|ref|YP_540216.1| flagellar basal body rod protein FlgG [Escherichia coli UTI89]
 gi|110641254|ref|YP_668984.1| flagellar basal body rod protein FlgG [Escherichia coli 536]
 gi|110805095|ref|YP_688615.1| flagellar basal body rod protein FlgG [Shigella flexneri 5 str.
           8401]
 gi|117623264|ref|YP_852177.1| flagellar basal body rod protein FlgG [Escherichia coli APEC O1]
 gi|157156521|ref|YP_001462312.1| flagellar basal body rod protein FlgG [Escherichia coli E24377A]
 gi|168747146|ref|ZP_02772168.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC4113]
 gi|168758629|ref|ZP_02783636.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC4401]
 gi|168764490|ref|ZP_02789497.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC4501]
 gi|168767737|ref|ZP_02792744.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC4486]
 gi|168773923|ref|ZP_02798930.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC4196]
 gi|168783608|ref|ZP_02808615.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC4076]
 gi|168790013|ref|ZP_02815020.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC869]
 gi|168802023|ref|ZP_02827030.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC508]
 gi|170080729|ref|YP_001730049.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli str. K-12 substr. DH10B]
 gi|170679890|ref|YP_001744102.1| flagellar basal body rod protein FlgG [Escherichia coli SMS-3-5]
 gi|188492805|ref|ZP_03000075.1| flagellar basal-body rod protein FlgG [Escherichia coli 53638]
 gi|191168453|ref|ZP_03030241.1| flagellar basal-body rod protein FlgG [Escherichia coli B7A]
 gi|191172450|ref|ZP_03033991.1| flagellar basal-body rod protein FlgG [Escherichia coli F11]
 gi|193064556|ref|ZP_03045636.1| flagellar basal-body rod protein FlgG [Escherichia coli E22]
 gi|193069501|ref|ZP_03050455.1| flagellar basal-body rod protein FlgG [Escherichia coli E110019]
 gi|194438123|ref|ZP_03070216.1| flagellar basal-body rod protein FlgG [Escherichia coli 101-1]
 gi|195935468|ref|ZP_03080850.1| flagellar basal body rod protein FlgG [Escherichia coli O157:H7
           str. EC4024]
 gi|208806632|ref|ZP_03248969.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC4206]
 gi|208815071|ref|ZP_03256250.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC4045]
 gi|208822750|ref|ZP_03263069.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC4042]
 gi|209399139|ref|YP_002269924.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC4115]
 gi|209918332|ref|YP_002292416.1| flagellar basal body rod protein FlgG [Escherichia coli SE11]
 gi|215486287|ref|YP_002328718.1| flagellar basal body rod protein FlgG [Escherichia coli O127:H6
           str. E2348/69]
 gi|217328263|ref|ZP_03444345.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. TW14588]
 gi|218553656|ref|YP_002386569.1| flagellar basal body rod protein FlgG [Escherichia coli IAI1]
 gi|218557960|ref|YP_002390873.1| flagellar basal body rod protein FlgG [Escherichia coli S88]
 gi|218694612|ref|YP_002402279.1| flagellar basal body rod protein FlgG [Escherichia coli 55989]
 gi|218700419|ref|YP_002408048.1| flagellar basal body rod protein FlgG [Escherichia coli IAI39]
 gi|218704486|ref|YP_002412005.1| flagellar basal body rod protein FlgG [Escherichia coli UMN026]
 gi|227886564|ref|ZP_04004369.1| flagellar basal body rod protein FlgG [Escherichia coli 83972]
 gi|237706936|ref|ZP_04537417.1| flagellar basal-body rod protein flgG [Escherichia sp. 3_2_53FAA]
 gi|238900332|ref|YP_002926128.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli BW2952]
 gi|253773898|ref|YP_003036729.1| flagellar basal body rod protein FlgG [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254161184|ref|YP_003044292.1| flagellar basal body rod protein FlgG [Escherichia coli B str.
           REL606]
 gi|254792460|ref|YP_003077297.1| flagellar basal body rod protein FlgG [Escherichia coli O157:H7
           str. TW14359]
 gi|256018665|ref|ZP_05432530.1| flagellar basal body rod protein FlgG [Shigella sp. D9]
 gi|256023224|ref|ZP_05437089.1| flagellar basal body rod protein FlgG [Escherichia sp. 4_1_40B]
 gi|260843318|ref|YP_003221096.1| flagellar component FlgG of cell-distal portion of basal-body rod
           [Escherichia coli O103:H2 str. 12009]
 gi|260854561|ref|YP_003228452.1| flagellar component FlgG of cell-distal portion of basal-body rod
           [Escherichia coli O26:H11 str. 11368]
 gi|260867441|ref|YP_003233843.1| flagellar component FlgG of cell-distal portion of basal-body rod
           [Escherichia coli O111:H- str. 11128]
 gi|261227017|ref|ZP_05941298.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli O157:H7 str. FRIK2000]
 gi|261256251|ref|ZP_05948784.1| flagellar component FlgG of cell-distal portion of basal-body rod
           [Escherichia coli O157:H7 str. FRIK966]
 gi|291282098|ref|YP_003498916.1| Flagellar basal-body rod protein flgG [Escherichia coli O55:H7 str.
           CB9615]
 gi|293404362|ref|ZP_06648356.1| flagellar basal-body rod protein flgG [Escherichia coli FVEC1412]
 gi|293409444|ref|ZP_06653020.1| flagellar basal-body rod protein FlgG [Escherichia coli B354]
 gi|293433368|ref|ZP_06661796.1| flagellar basal-body rod protein FlgG [Escherichia coli B088]
 gi|297516691|ref|ZP_06935077.1| flagellar basal body rod protein FlgG [Escherichia coli OP50]
 gi|298380142|ref|ZP_06989747.1| flagellar basal-body rod protein flgG [Escherichia coli FVEC1302]
 gi|300816780|ref|ZP_07097000.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 107-1]
 gi|300821141|ref|ZP_07101290.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 119-7]
 gi|300899597|ref|ZP_07117836.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 198-1]
 gi|300902469|ref|ZP_07120451.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 84-1]
 gi|300918680|ref|ZP_07135261.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 115-1]
 gi|300922604|ref|ZP_07138704.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 182-1]
 gi|300928370|ref|ZP_07143904.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 187-1]
 gi|300938643|ref|ZP_07153372.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 21-1]
 gi|300950173|ref|ZP_07164118.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 116-1]
 gi|300954382|ref|ZP_07166836.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 175-1]
 gi|300974382|ref|ZP_07172594.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 45-1]
 gi|300982619|ref|ZP_07176203.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 200-1]
 gi|301023265|ref|ZP_07187062.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 69-1]
 gi|301029707|ref|ZP_07192761.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 196-1]
 gi|301051138|ref|ZP_07197968.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 185-1]
 gi|301304983|ref|ZP_07211085.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 124-1]
 gi|301328552|ref|ZP_07221613.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 78-1]
 gi|301644990|ref|ZP_07244956.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 146-1]
 gi|306814073|ref|ZP_07448246.1| flagellar basal body rod protein FlgG [Escherichia coli NC101]
 gi|307137713|ref|ZP_07497069.1| flagellar basal body rod protein FlgG [Escherichia coli H736]
 gi|307310144|ref|ZP_07589794.1| flagellar basal-body rod protein FlgG [Escherichia coli W]
 gi|309798072|ref|ZP_07692447.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 145-7]
 gi|312968848|ref|ZP_07783055.1| flagellar basal-body rod protein FlgG [Escherichia coli 2362-75]
 gi|331641622|ref|ZP_08342757.1| flagellar basal-body rod protein FlgG [Escherichia coli H736]
 gi|331646336|ref|ZP_08347439.1| flagellar basal-body rod protein FlgG [Escherichia coli M605]
 gi|331657140|ref|ZP_08358102.1| flagellar basal-body rod protein FlgG [Escherichia coli TA206]
 gi|331662484|ref|ZP_08363407.1| flagellar basal-body rod protein FlgG [Escherichia coli TA143]
 gi|331667478|ref|ZP_08368342.1| flagellar basal-body rod protein FlgG [Escherichia coli TA271]
 gi|331672598|ref|ZP_08373387.1| flagellar basal-body rod protein FlgG [Escherichia coli TA280]
 gi|331676869|ref|ZP_08377565.1| flagellar basal-body rod protein FlgG [Escherichia coli H591]
 gi|331682580|ref|ZP_08383199.1| flagellar basal-body rod protein FlgG [Escherichia coli H299]
 gi|332279734|ref|ZP_08392147.1| flagellar basal-body rod protein FlgG [Shigella sp. D9]
 gi|78100014|sp|P0ABX7|FLGG_ECO57 RecName: Full=Flagellar basal-body rod protein flgG; AltName:
           Full=Distal rod protein
 gi|78100015|sp|P0ABX6|FLGG_ECOL6 RecName: Full=Flagellar basal-body rod protein flgG; AltName:
           Full=Distal rod protein
 gi|78100016|sp|P0ABX5|FLGG_ECOLI RecName: Full=Flagellar basal-body rod protein flgG; AltName:
           Full=Distal rod protein
 gi|12514619|gb|AAG55824.1|AE005318_1 flagellar biosynthesis, cell-distal portion of basal-body rod
           [Escherichia coli O157:H7 str. EDL933]
 gi|26107619|gb|AAN79818.1|AE016759_92 Flagellar basal-body rod protein flgG [Escherichia coli CFT073]
 gi|1787318|gb|AAC74162.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli str. K-12 substr. MG1655]
 gi|4062656|dbj|BAA35887.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli str. K12 substr. W3110]
 gi|13360920|dbj|BAB34879.1| flagellar basal body rod protein flgG [Escherichia coli O157:H7
           str. Sakai]
 gi|91071804|gb|ABE06685.1| flagellar basal body rod protein FlgG [Escherichia coli UTI89]
 gi|110342846|gb|ABG69083.1| flagellar basal-body rod protein FlgG [Escherichia coli 536]
 gi|110614643|gb|ABF03310.1| flagellar basal-body rod protein FlgG [Shigella flexneri 5 str.
           8401]
 gi|115512388|gb|ABJ00463.1| flagellar basal-body rod protein FlgG [Escherichia coli APEC O1]
 gi|157078551|gb|ABV18259.1| flagellar basal-body rod protein FlgG [Escherichia coli E24377A]
 gi|169888564|gb|ACB02271.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli str. K-12 substr. DH10B]
 gi|170517608|gb|ACB15786.1| flagellar basal-body rod protein FlgG [Escherichia coli SMS-3-5]
 gi|187770380|gb|EDU34224.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC4196]
 gi|188018193|gb|EDU56315.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC4113]
 gi|188488004|gb|EDU63107.1| flagellar basal-body rod protein FlgG [Escherichia coli 53638]
 gi|188999095|gb|EDU68081.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC4076]
 gi|189354587|gb|EDU73006.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC4401]
 gi|189363057|gb|EDU81476.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC4486]
 gi|189365523|gb|EDU83939.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC4501]
 gi|189370495|gb|EDU88911.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC869]
 gi|189375944|gb|EDU94360.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC508]
 gi|190901472|gb|EDV61233.1| flagellar basal-body rod protein FlgG [Escherichia coli B7A]
 gi|190907334|gb|EDV66932.1| flagellar basal-body rod protein FlgG [Escherichia coli F11]
 gi|192927808|gb|EDV82422.1| flagellar basal-body rod protein FlgG [Escherichia coli E22]
 gi|192957249|gb|EDV87698.1| flagellar basal-body rod protein FlgG [Escherichia coli E110019]
 gi|194423059|gb|EDX39053.1| flagellar basal-body rod protein FlgG [Escherichia coli 101-1]
 gi|208726433|gb|EDZ76034.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC4206]
 gi|208731719|gb|EDZ80407.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC4045]
 gi|208738235|gb|EDZ85918.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC4042]
 gi|209160539|gb|ACI37972.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC4115]
 gi|209773358|gb|ACI84991.1| flagellar basal body rod protein flgG [Escherichia coli]
 gi|209773360|gb|ACI84992.1| flagellar basal body rod protein flgG [Escherichia coli]
 gi|209773362|gb|ACI84993.1| flagellar basal body rod protein flgG [Escherichia coli]
 gi|209773364|gb|ACI84994.1| flagellar basal body rod protein flgG [Escherichia coli]
 gi|209773366|gb|ACI84995.1| flagellar basal body rod protein flgG [Escherichia coli]
 gi|209911591|dbj|BAG76665.1| flagellar basal-body rod protein FlgG [Escherichia coli SE11]
 gi|215264359|emb|CAS08716.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli O127:H6 str. E2348/69]
 gi|217318690|gb|EEC27116.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. TW14588]
 gi|218351344|emb|CAU97050.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli 55989]
 gi|218360424|emb|CAQ97978.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli IAI1]
 gi|218364729|emb|CAR02419.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli S88]
 gi|218370405|emb|CAR18212.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli IAI39]
 gi|218431583|emb|CAR12462.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli UMN026]
 gi|222032831|emb|CAP75570.1| flagellar basal-body rod protein flgG [Escherichia coli LF82]
 gi|226898146|gb|EEH84405.1| flagellar basal-body rod protein flgG [Escherichia sp. 3_2_53FAA]
 gi|227836768|gb|EEJ47234.1| flagellar basal body rod protein FlgG [Escherichia coli 83972]
 gi|238861100|gb|ACR63098.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli BW2952]
 gi|242376882|emb|CAQ31599.1| flagellar basal-body rod protein FlgG, subunit of Flagellar Motor
           Complex and Flagellum [Escherichia coli BL21(DE3)]
 gi|253324942|gb|ACT29544.1| flagellar basal-body rod protein FlgG [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253973085|gb|ACT38756.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli B str. REL606]
 gi|253977299|gb|ACT42969.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli BL21(DE3)]
 gi|254591860|gb|ACT71221.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli O157:H7 str. TW14359]
 gi|257753210|dbj|BAI24712.1| flagellar component FlgG of cell-distal portion of basal-body rod
           [Escherichia coli O26:H11 str. 11368]
 gi|257758465|dbj|BAI29962.1| flagellar component FlgG of cell-distal portion of basal-body rod
           [Escherichia coli O103:H2 str. 12009]
 gi|257763797|dbj|BAI35292.1| flagellar component FlgG of cell-distal portion of basal-body rod
           [Escherichia coli O111:H- str. 11128]
 gi|260449782|gb|ACX40204.1| flagellar basal-body rod protein FlgG [Escherichia coli DH1]
 gi|281178187|dbj|BAI54517.1| flagellar basal-body rod protein FlgG [Escherichia coli SE15]
 gi|284920901|emb|CBG33964.1| flagellar basal-body rod protein FlgG [Escherichia coli 042]
 gi|290761971|gb|ADD55932.1| Flagellar basal-body rod protein flgG [Escherichia coli O55:H7 str.
           CB9615]
 gi|291324187|gb|EFE63609.1| flagellar basal-body rod protein FlgG [Escherichia coli B088]
 gi|291428948|gb|EFF01973.1| flagellar basal-body rod protein flgG [Escherichia coli FVEC1412]
 gi|291469912|gb|EFF12396.1| flagellar basal-body rod protein FlgG [Escherichia coli B354]
 gi|294490415|gb|ADE89171.1| flagellar basal-body rod protein FlgG [Escherichia coli IHE3034]
 gi|298279840|gb|EFI21348.1| flagellar basal-body rod protein flgG [Escherichia coli FVEC1302]
 gi|299877395|gb|EFI85606.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 196-1]
 gi|300297159|gb|EFJ53544.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 185-1]
 gi|300307084|gb|EFJ61604.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 200-1]
 gi|300318618|gb|EFJ68402.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 175-1]
 gi|300356868|gb|EFJ72738.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 198-1]
 gi|300397110|gb|EFJ80648.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 69-1]
 gi|300405501|gb|EFJ89039.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 84-1]
 gi|300410625|gb|EFJ94163.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 45-1]
 gi|300414174|gb|EFJ97484.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 115-1]
 gi|300421081|gb|EFK04392.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 182-1]
 gi|300450520|gb|EFK14140.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 116-1]
 gi|300456428|gb|EFK19921.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 21-1]
 gi|300463628|gb|EFK27121.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 187-1]
 gi|300526440|gb|EFK47509.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 119-7]
 gi|300530554|gb|EFK51616.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 107-1]
 gi|300839701|gb|EFK67461.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 124-1]
 gi|300844944|gb|EFK72704.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 78-1]
 gi|301076719|gb|EFK91525.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 146-1]
 gi|305852710|gb|EFM53158.1| flagellar basal body rod protein FlgG [Escherichia coli NC101]
 gi|306909862|gb|EFN40356.1| flagellar basal-body rod protein FlgG [Escherichia coli W]
 gi|307553080|gb|ADN45855.1| flagellar basal-body rod protein FlgG [Escherichia coli ABU 83972]
 gi|308118355|gb|EFO55617.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 145-7]
 gi|309701350|emb|CBJ00651.1| flagellar basal-body rod protein FlgG [Escherichia coli ETEC
           H10407]
 gi|312286250|gb|EFR14163.1| flagellar basal-body rod protein FlgG [Escherichia coli 2362-75]
 gi|312945640|gb|ADR26467.1| flagellar basal body rod protein FlgG [Escherichia coli O83:H1 str.
           NRG 857C]
 gi|315060356|gb|ADT74683.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli W]
 gi|315135710|dbj|BAJ42869.1| flagellar basal-body rod protein flgG [Escherichia coli DH1]
 gi|315253879|gb|EFU33847.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 85-1]
 gi|315287367|gb|EFU46778.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 110-3]
 gi|315291072|gb|EFU50435.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 153-1]
 gi|315296709|gb|EFU56004.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 16-3]
 gi|315618248|gb|EFU98838.1| flagellar basal-body rod protein FlgG [Escherichia coli 3431]
 gi|320189761|gb|EFW64417.1| Flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. EC1212]
 gi|320196440|gb|EFW71063.1| Flagellar basal-body rod protein FlgG [Escherichia coli WV_060327]
 gi|320200974|gb|EFW75558.1| Flagellar basal-body rod protein FlgG [Escherichia coli EC4100B]
 gi|320637529|gb|EFX07329.1| flagellar basal body rod protein FlgG [Escherichia coli O157:H7
           str. G5101]
 gi|320643090|gb|EFX12291.1| flagellar basal body rod protein FlgG [Escherichia coli O157:H-
           str. 493-89]
 gi|320648548|gb|EFX17203.1| flagellar basal body rod protein FlgG [Escherichia coli O157:H-
           str. H 2687]
 gi|320653862|gb|EFX21936.1| flagellar basal body rod protein FlgG [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320659342|gb|EFX26911.1| flagellar basal body rod protein FlgG [Escherichia coli O55:H7 str.
           USDA 5905]
 gi|320664477|gb|EFX31628.1| flagellar basal body rod protein FlgG [Escherichia coli O157:H7
           str. LSU-61]
 gi|323156885|gb|EFZ43019.1| flagellar basal-body rod protein FlgG [Escherichia coli EPECa14]
 gi|323163703|gb|EFZ49523.1| flagellar basal-body rod protein FlgG [Escherichia coli E128010]
 gi|323175691|gb|EFZ61285.1| flagellar basal-body rod protein FlgG [Escherichia coli 1180]
 gi|323185799|gb|EFZ71160.1| flagellar basal-body rod protein FlgG [Escherichia coli 1357]
 gi|323190590|gb|EFZ75862.1| flagellar basal-body rod protein FlgG [Escherichia coli RN587/1]
 gi|323379083|gb|ADX51351.1| flagellar basal-body rod protein FlgG [Escherichia coli KO11]
 gi|323937818|gb|EGB34082.1| flagellar basal-body rod protein FlgG [Escherichia coli E1520]
 gi|323942547|gb|EGB38714.1| flagellar basal-body rod protein FlgG [Escherichia coli E482]
 gi|323947620|gb|EGB43624.1| flagellar basal-body rod protein FlgG [Escherichia coli H120]
 gi|323953236|gb|EGB49102.1| flagellar basal-body rod protein FlgG [Escherichia coli H252]
 gi|323957902|gb|EGB53614.1| flagellar basal-body rod protein FlgG [Escherichia coli H263]
 gi|323962677|gb|EGB58255.1| flagellar basal-body rod protein FlgG [Escherichia coli H489]
 gi|323967019|gb|EGB62445.1| flagellar basal-body rod protein FlgG [Escherichia coli M863]
 gi|323973333|gb|EGB68522.1| flagellar basal-body rod protein FlgG [Escherichia coli TA007]
 gi|323976549|gb|EGB71637.1| flagellar basal-body rod protein FlgG [Escherichia coli TW10509]
 gi|324007918|gb|EGB77137.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 57-2]
 gi|324013352|gb|EGB82571.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 60-1]
 gi|324017418|gb|EGB86637.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 117-3]
 gi|324117351|gb|EGC11258.1| flagellar basal-body rod protein FlgG [Escherichia coli E1167]
 gi|326339300|gb|EGD63114.1| Flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. 1125]
 gi|326344739|gb|EGD68487.1| Flagellar basal-body rod protein FlgG [Escherichia coli O157:H7
           str. 1044]
 gi|327253477|gb|EGE65115.1| flagellar basal-body rod protein FlgG [Escherichia coli STEC_7v]
 gi|330910892|gb|EGH39402.1| flagellar basal-body rod protein FlgG [Escherichia coli AA86]
 gi|331038420|gb|EGI10640.1| flagellar basal-body rod protein FlgG [Escherichia coli H736]
 gi|331045088|gb|EGI17215.1| flagellar basal-body rod protein FlgG [Escherichia coli M605]
 gi|331055388|gb|EGI27397.1| flagellar basal-body rod protein FlgG [Escherichia coli TA206]
 gi|331060906|gb|EGI32870.1| flagellar basal-body rod protein FlgG [Escherichia coli TA143]
 gi|331065063|gb|EGI36958.1| flagellar basal-body rod protein FlgG [Escherichia coli TA271]
 gi|331070241|gb|EGI41607.1| flagellar basal-body rod protein FlgG [Escherichia coli TA280]
 gi|331075558|gb|EGI46856.1| flagellar basal-body rod protein FlgG [Escherichia coli H591]
 gi|331080211|gb|EGI51390.1| flagellar basal-body rod protein FlgG [Escherichia coli H299]
 gi|332102086|gb|EGJ05432.1| flagellar basal-body rod protein FlgG [Shigella sp. D9]
 gi|333004888|gb|EGK24408.1| flagellar basal-body rod protein FlgG [Shigella flexneri VA-6]
          Length = 260

 Score =  168 bits (425), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 88/259 (33%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M +S  I      A +  +  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+   T    D A++G  +F +  P      TRDG F
Sbjct: 61  TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGSSAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V  +G LV+A G      +      +         V    +       +  + L +   
Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +  +         + +        + +G++E SN N   E+  MI + + +
Sbjct: 181 DTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +   ++ + +  +
Sbjct: 241 EINSKAVSTTDQMLQKLTQ 259


>gi|118475132|ref|YP_891713.1| flagellar basal body rod protein FlgG [Campylobacter fetus subsp.
           fetus 82-40]
 gi|118414358|gb|ABK82778.1| flagellar basal-body rod protein FlgG [Campylobacter fetus subsp.
           fetus 82-40]
          Length = 262

 Score =  168 bits (425), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 46/261 (17%), Positives = 100/261 (38%), Gaps = 21/261 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S        +A + ++ T + N++N +T+G++  + +F++++               
Sbjct: 1   MIRSLYTAATGMVAQQTQIDTTSHNIANVNTIGYKKNRAEFADLMYQTMQYAGTPTSTTT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 +    V           G F  TG  LD  + G+ +F ++ P      TR+G F
Sbjct: 61  MSPTGMEVGLGVRPTAITKVFGQGYFKETGNNLDMVIAGNGFFQIQLPDGTTAYTRNGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           K+  DG++V++ G   + +M            +   V      +Q+   I  + L +   
Sbjct: 121 KLDGDGNIVNSDGYRLLPEMNIPADATQISVGVDGTVSVLQPGNQEMTQIGQIELANFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++              +G T     +K+GF+E SN   + EM  +I   + +
Sbjct: 181 PSGLHAMGDNNFLETAASGAPNIGNGGTDGFGQIKQGFVEMSNVQLVEEMTDLITGQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
            + +  I   ++ + + +  +
Sbjct: 241 EANSKAITTADEML-QTVNQL 260


>gi|260779345|ref|ZP_05888237.1| flagellar basal-body rod protein FlgG [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260605509|gb|EEX31804.1| flagellar basal-body rod protein FlgG [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 261

 Score =  168 bits (425), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 46/261 (17%), Positives = 100/261 (38%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M ++  +      A + +++ +++N++N +TVGF+  +V F ++  +I+           
Sbjct: 1   MHSALWVSKTGMAAQDTKMTAISNNLANVNTVGFKRDRVVFEDLFYSIQRQPGALVDQVN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106
                 Q  S V           G+  +T  ELD A+ G  +F +E+    I+ TR+G+F
Sbjct: 61  ELPAGVQLGSGVRVVGTQKVFTQGNTQNTSQELDLAVMGQGFFQIENSDGQIMYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
            V  +G +V++ G      +      +     +   V      S   + +  + L     
Sbjct: 121 HVNSEGLMVNSQGLPLEPQIQIPENALSVSVGVDGTVSATTADSTAPQELGQITLAKFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +           ++         ++K+G LE SN   + EM  MI   + +
Sbjct: 181 PAGLEAVGGNLFRETEASGQADELIAGEDGVGSIKQGSLEGSNVQVVEEMVDMITTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
                ++   +  +    +++
Sbjct: 241 EMNAKVVSAADDMLKFVAQSV 261


>gi|288940411|ref|YP_003442651.1| flagellar basal-body rod protein FlgG [Allochromatium vinosum DSM
           180]
 gi|288895783|gb|ADC61619.1| flagellar basal-body rod protein FlgG [Allochromatium vinosum DSM
           180]
          Length = 263

 Score =  168 bits (425), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 52/262 (19%), Positives = 96/262 (36%), Gaps = 20/262 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  I      A + R+S V++N++N +T GF+  +  F +++               
Sbjct: 1   MNQALWIAKTGLDAQQTRMSVVSNNLANVNTTGFKKGRAVFEDLIYHSCRQHGAQATQET 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                    + V +         G++I TG  LD A+EG  +F +  P G I  TRDG F
Sbjct: 61  QLPSGLTIGTGVRTVATQKLFAQGNYIQTGNSLDMAIEGQGFFQILMPGGEIGYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-IATMGLYSVDM 165
           ++  DG +V ++G      +                    + +Q G+V I  + L +   
Sbjct: 121 QLNADGEVVMSNGYALQPALVIPADAESITIGKDGTVSIKQPNQVGEVQIGQIQLANFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +           +  +       ++ +  LE SN N   E+  MI   + +
Sbjct: 181 PAGLQPIGENLFRETTASGAPQQSNPGENGFGSLVQCSLETSNVNMAEELVNMIETQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNIA 242
              +  I   +  +     N+A
Sbjct: 241 EVNSKAISAADSMLQFVNNNLA 262


>gi|251797436|ref|YP_003012167.1| hypothetical protein Pjdr2_3448 [Paenibacillus sp. JDR-2]
 gi|247545062|gb|ACT02081.1| protein of unknown function DUF1078 domain protein [Paenibacillus
           sp. JDR-2]
          Length = 270

 Score =  168 bits (425), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 50/267 (18%), Positives = 100/267 (37%), Gaps = 28/267 (10%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++     + +L  + +N++N +TVGF+  +V FS+++    + +        
Sbjct: 1   MLRSMYSGVSGMRGFQTKLDVIGNNIANVNTVGFKGGRVMFSDILSQTTSGVTASLEGEQ 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP--RGIILTRDGR 105
                 Q    V           GS ++T    D  ++GD +FA+ +       LTR G 
Sbjct: 61  GGVNAKQIGLGVTISAIDTIHTPGSAMTTNVPTDLRIDGDGFFAVSAGGDSPTYLTRAGN 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVP---IQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162
           F +  +  LV+A G + +            +       +       +   + +A +G+  
Sbjct: 121 FTLDGNRQLVNADGMFVLSSDGEPIVLGEDVTSFSIGQDGSILAVTADGTEAVAQLGVVK 180

Query: 163 VDMSQGFVRRENSGISPNIPPTPLEDLSGVT----------VKRGFLEDSNANSMYEMGQ 212
           V    G  +   +         P  +   VT          +  G LE SN +   E  +
Sbjct: 181 VVNPSGLEKVGGNLYRVTANANPDGEFEIVTADDPELGTGAIIAGQLEMSNVDLTNEFTE 240

Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIR 239
           MI   + F + + +I  +++ + E + 
Sbjct: 241 MIVAQRGFQANSRIITTSDEILQEVVN 267


>gi|224417699|ref|ZP_03655705.1| flagellar basal body rod protein FlgG [Helicobacter canadensis MIT
           98-5491]
 gi|253827048|ref|ZP_04869933.1| flagellar distal rod protein FlgG [Helicobacter canadensis MIT
           98-5491]
 gi|253510454|gb|EES89113.1| flagellar distal rod protein FlgG [Helicobacter canadensis MIT
           98-5491]
          Length = 263

 Score =  168 bits (425), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 47/262 (17%), Positives = 101/262 (38%), Gaps = 23/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +        L  + ++   ++N+SN +T G+R  + +F+++   +            
Sbjct: 1   MMRALYTATTGMLGQQLQIDVTSNNISNVNTFGYRKERAEFADLFHQVLQYAGSSTSETT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                      V           G+F  T   LD A+ G+ +F +E P   I  TRDG F
Sbjct: 61  LSPTGIEVGLGVRPTSVQKIFSQGNFKETENNLDIAITGNGFFQIELPDGTIAYTRDGSF 120

Query: 107 KVTDDGSLVSASGK--YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
           K+ D+G++V++ G    P + +     QI    +      +G  ++  + +  +   +  
Sbjct: 121 KLDDEGNVVNSQGYLLVPNITIPDDATQINIGTDGTVSVVQGNETEVNE-LGQIETVNFI 179

Query: 165 MSQGFVRRENSGI-SPNIPPTP----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G     ++   + N    P            +++GF+E SN   + EM  +I   + 
Sbjct: 180 NPAGLHALGDNLYLNTNASGDPIVGTPGLNGFGQLRQGFVETSNVKLVEEMTDLIVGQRA 239

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           + + +  I   +  + + +  +
Sbjct: 240 YEANSKSIQTADSML-QIVNQL 260


>gi|223040682|ref|ZP_03610951.1| flagellar basal-body rod protein FlgG [Campylobacter rectus RM3267]
 gi|222878046|gb|EEF13158.1| flagellar basal-body rod protein FlgG [Campylobacter rectus RM3267]
          Length = 262

 Score =  168 bits (425), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 38/261 (14%), Positives = 92/261 (35%), Gaps = 21/261 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S        +A + ++   + N++N +T+G++  + +F++++  +            
Sbjct: 1   MMRSIYSAATGMIAQQTQIDVTSHNIANVNTIGYKKNRAEFADLMYQVMEYAGTATSATT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                                  G F  T   LD  + G+ +F ++ P      TR+G F
Sbjct: 61  KSPTGIEVGLGARPTAITKIFSQGYFKETSNNLDMVIAGNGFFQVQLPDGTTAYTRNGAF 120

Query: 107 KVTDDGSLVSASGKY-PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           K+  +G++V++ G                       V      + +   +  + L +   
Sbjct: 121 KLNSEGTVVNSDGYVLQPQMTIPADATQISVGTDGTVSVLQPGNTEMAQVGRIELANFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++   P      +           T+++GF+E SN   + EM  +I   + +
Sbjct: 181 PAGLHSMGDNLYLPTGSSGEVVVGTAGLDGLGTIRQGFVEMSNVQLVEEMTDLITGQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
            + +  I  ++  +   + ++
Sbjct: 241 EANSKAITTSDDML-SIVNSL 260


>gi|15639945|ref|NP_219398.1| flagellar basal-body rod protein (flgG-2) [Treponema pallidum
           subsp. pallidum str. Nichols]
 gi|189026184|ref|YP_001933956.1| flagellar basal-body rod protein [Treponema pallidum subsp.
           pallidum SS14]
 gi|3323282|gb|AAC65916.1| flagellar basal-body rod protein (flgG-2) [Treponema pallidum
           subsp. pallidum str. Nichols]
 gi|189018759|gb|ACD71377.1| flagellar basal-body rod protein [Treponema pallidum subsp.
           pallidum SS14]
 gi|291060316|gb|ADD73051.1| flagellar basal-body rod protein [Treponema pallidum subsp.
           pallidum str. Chicago]
          Length = 271

 Score =  168 bits (425), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 50/267 (18%), Positives = 100/267 (37%), Gaps = 26/267 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKND------ 51
           M   +    +   A ++RL  +A N++N DT  ++        F E++    ND      
Sbjct: 1   MIRGWYTAASGMSAQQRRLDAIAQNLANVDTTSYKRDVAVHKSFPELLLRRVNDDGVVKN 60

Query: 52  ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101
                     + +    V   + +   E GS   T +  D ALEG  +F + +P+G   T
Sbjct: 61  PFGSSDVSPIVGKLGLGVEVNELFTEFEQGSLKQTQSPSDIALEGMGFFVIRTPQGEEYT 120

Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMA----SVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157
           R+G F V  +G L++ +G   + +              ++    V         G  +  
Sbjct: 121 RNGNFLVGVEGYLMTKNGYPVLGENGPLFLQERYYTINQNGEIYVRPIDRPDVDGFFLDR 180

Query: 158 MGLYSVDMSQGFVRRENS-GISPNIPPTPL--EDLSGVTVKRGFLEDSNANSMYEMGQMI 214
           + + + +  +   ++     +   +   P+  E        +GF+E SN N + EM +MI
Sbjct: 181 LKIVTFENVRYLQKKGADTYMQTPVSGAPIAAEGPERPAAVQGFVEASNVNVVNEMVRMI 240

Query: 215 HLTQKFNSITTLIDENEKSMLEAIRNI 241
            + + + +    I   +  M      +
Sbjct: 241 EVNRAYEANQKTIQAEDGMMGRLWNEV 267


>gi|237653581|ref|YP_002889895.1| flagellar basal body rod protein FlgG [Thauera sp. MZ1T]
 gi|237624828|gb|ACR01518.1| flagellar basal-body rod protein FlgG [Thauera sp. MZ1T]
          Length = 260

 Score =  168 bits (425), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 89/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S         A +  L  +++N++N  T GF+  +  F +++               
Sbjct: 1   MIRSLWTARTGLDAQQTSLDVISNNLANVSTNGFKRQRAIFEDLLYQTIRQPGAQSTQQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+   TG  LD A++G+ +F +  P      TRDG F
Sbjct: 61  QISSGLQIGTGVKPVATERIFTQGTLQQTGGSLDVAVQGNGFFQVAMPDGTTAYTRDGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           ++   G++V+ASG     ++      +     +   V            I  + L +   
Sbjct: 121 QLDSQGNVVTASGYTLADNINIPADALSITIGKDGTVSVLQAGQTAPVEIGAIQLATFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
           S G      +                 T     + +G++E SN N   E+  MI   + +
Sbjct: 181 SGGLQAAGENLFYETASSGVATPTQPGTNGAGVLNQGYVEVSNVNVAEELVSMIVTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  I  +++ +    +
Sbjct: 241 ELNSRAISTSDQMLGRLTQ 259


>gi|320173530|gb|EFW48726.1| Flagellar basal-body rod protein FlgG [Shigella dysenteriae CDC
           74-1112]
          Length = 260

 Score =  168 bits (425), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 89/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M +S  I      A +  +  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+   T    D A++G  +F +  P    + TRDG F
Sbjct: 61  TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGSSVYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V  +G LV+A G      +      +         V    +       +  + L +   
Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +  +         + +        + +G++E SN N   E+  MI + + +
Sbjct: 181 DTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +   ++ + +  +
Sbjct: 241 EINSKAVSTTDQMLQKLTQ 259


>gi|251789170|ref|YP_003003891.1| flagellar basal-body rod protein FlgG [Dickeya zeae Ech1591]
 gi|247537791|gb|ACT06412.1| flagellar basal-body rod protein FlgG [Dickeya zeae Ech1591]
          Length = 260

 Score =  168 bits (425), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 84/259 (32%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A +  +  +++N++N  T GF+  +  F +++               
Sbjct: 1   MIRSLWIAKTGLNAQQTNMDVISNNLANVSTNGFKRQRAVFEDLMYQTVRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           GSF  TG   D A++G  +F +  P      TRDG F
Sbjct: 61  TLPSGLQLGTGVRPVATERIHTQGSFSETGNVKDLAIKGAGFFQVLMPDGTTAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +   +G LV++SG      +                V    +       I  + L     
Sbjct: 121 QQDSNGQLVTSSGFQVQPVITIPANSSNLTVGRDGVVTVTQQGQAAPVQIGQLNLAMFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +  +           +        + + F+E SN N   E+  MI   + +
Sbjct: 181 EAGLENLGENLYAETASSGAPTQSTPGLNGAGLIYQKFVETSNVNVAEELVSMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  I   ++ + +  +
Sbjct: 241 EINSKAISSTDQMLQKLTQ 259


>gi|119899025|ref|YP_934238.1| flagellar basal body rod protein FlgG [Azoarcus sp. BH72]
 gi|119671438|emb|CAL95351.1| flagellar basal-body rod protein FlgG [Azoarcus sp. BH72]
          Length = 260

 Score =  168 bits (425), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 90/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S         A +  L  +++N++N  T GF+  +  F +++               
Sbjct: 1   MIRSLWTARTGLDAQQTSLDVISNNLANVSTNGFKRQRAVFEDLLYQTMRQPGAQSTQQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+   TG  LD A++G+ +F +  P      TRDG F
Sbjct: 61  QVGSGLQIGTGVRPVATERIFTQGNLQQTGGSLDIAIQGNGFFQIALPDGTTAYTRDGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           ++ + G++V+ASG     ++      +     +   V            I  + L +   
Sbjct: 121 QLDNQGNVVTASGYPLADNINIPADTLTVTVAKDGTVSVLQAGQTTPTQIGAIQLATFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
           S G      +    +            T     + +G++E SN N   E+  MI   + +
Sbjct: 181 SGGLQSAGENLFLESASSGVATPNQPGTNGTGVLNQGYVETSNVNVAEELVNMIVTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  I  ++  +    +
Sbjct: 241 EMNSRAIQTSDSMLGRLTQ 259


>gi|285018207|ref|YP_003375918.1| flagellar basal-body rod protein flgg [Xanthomonas albilineans GPE
           PC73]
 gi|283473425|emb|CBA15930.1| probable flagellar basal-body rod protein flgg [Xanthomonas
           albilineans]
          Length = 261

 Score =  168 bits (425), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 51/260 (19%), Positives = 87/260 (33%), Gaps = 20/260 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  +      A + R+S V++N++NT T GF+  +  F +++   +           
Sbjct: 1   MNQALWVAKTGMDAQQTRMSVVSNNLANTSTTGFKRDRASFEDLLYQQRRQPGGASSSQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V         E GS   TG  LD  + G  +  ++ P G    TRDG  
Sbjct: 61  QLPSGLQLGTGVRVVATSKDFEQGSQQQTGRALDVMVNGRGFLEVQMPDGTSAYTRDGSL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V   G LV+ SG      +                V  +   S     + ++ L     
Sbjct: 121 QVNAQGQLVTNSGYAIQPGIQIPEGAQSLTIGNDGTVSVQVPGSAAALQVGSLTLTDFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +         P +  +       T  +G LE SN N + E+  MI   + +
Sbjct: 181 PSGLQATGQNLYVETAASGPAQSGTPGLNGLGTTVQGALEGSNVNVVEELVSMIETQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRN 240
                 I   +  +     N
Sbjct: 241 EMNAKAISTTDAMLGYLNNN 260


>gi|331652131|ref|ZP_08353150.1| flagellar basal-body rod protein FlgG [Escherichia coli M718]
 gi|331050409|gb|EGI22467.1| flagellar basal-body rod protein FlgG [Escherichia coli M718]
          Length = 260

 Score =  168 bits (424), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 88/259 (33%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M +S  I      A +  +  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+   T    D A++G  +F +  P      TRDG F
Sbjct: 61  TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGSSAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V  +G LV+A G      +      +         V    +       +  + L +   
Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +  +         + +        + +G++E SN N   E+  MI + + +
Sbjct: 181 ETGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +   ++ + +  +
Sbjct: 241 EINSKAVSTTDQMLQKLTQ 259


>gi|218528725|ref|YP_002419541.1| flagellar basal body rod protein [Methylobacterium chloromethanicum
           CM4]
 gi|218521028|gb|ACK81613.1| flagellar basal body rod protein [Methylobacterium chloromethanicum
           CM4]
          Length = 242

 Score =  168 bits (424), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 73/243 (30%), Positives = 137/243 (56%), Gaps = 5/243 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           MQ+S  + L++Q+ALE+RL+T A+N++N  TVGFR  +V FSE++         +++FV 
Sbjct: 1   MQSSLYVALSSQIALEKRLTTTANNVANMATVGFRAEEVSFSELLARSNRG---EVAFVG 57

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
            GK  +S+  G    T + LD A++GDAW  ++ P+   + TRDGR  +  +G L +  G
Sbjct: 58  PGKTTISRAAGPTTKTDSTLDVAVQGDAWLGVKGPKGDTLYTRDGRLTMDANGQLRTV-G 116

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
             PV+D    P+ +  +     +G  G I Q    +  +G++S+D      R   + ++ 
Sbjct: 117 GMPVVDPGGGPLLLDPQAGPPVIGRDGSIHQGVNQVGALGVFSIDPKATLTRSGENAVAA 176

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           ++P  P++D + + + +G++E +N N + EM ++I + + F S  T+  E + ++  A++
Sbjct: 177 SLPGRPVQDFTRIGLVQGYVEGANVNPIMEMTRLIAIQRAFESAATMTSEADTTLTGAVK 236

Query: 240 NIA 242
            + 
Sbjct: 237 TLG 239


>gi|147678415|ref|YP_001212630.1| flagellar hook protein FlgE [Pelotomaculum thermopropionicum SI]
 gi|146274512|dbj|BAF60261.1| flagellar hook protein FlgE [Pelotomaculum thermopropionicum SI]
          Length = 269

 Score =  168 bits (424), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 51/265 (19%), Positives = 100/265 (37%), Gaps = 27/265 (10%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50
           M  S   G +   + + R+  + +N++N +T+GF+  +  F +V+               
Sbjct: 1   MLRSLYAGASGLRSHQTRMDVIGNNIANVNTIGFKGSRANFQDVLYQTIRFGSAGSDNTG 60

Query: 51  --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---RGIILTRDGR 105
             +  Q    V       +   G   STG +LD A+ G+ WF ++       +  TR+G 
Sbjct: 61  GVNKSQVGLGVTVASITNNTGPGGMQSTGRDLDLAINGNGWFMVKPDASQDEVYYTREGT 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG------KVIATMG 159
           F + ++G LV+++G Y +    +      +     N+ + G IS         +    +G
Sbjct: 121 FYIDNNGYLVNSNGYYLLDVSGNTIQFPSEGVASINISKDGIISYTPLGGEMVENAFQIG 180

Query: 160 LYSVDMSQGFVRRENSGI------SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQM 213
           L       G  R  ++           +           T+  G+LE SN +   E   M
Sbjct: 181 LAMFPNQDGLERVGSNTFKESLTSGAALDEKTPNSGGLGTINSGYLEMSNVDLTDEFTNM 240

Query: 214 IHLTQKFNSITTLIDENEKSMLEAI 238
           I   + + +    I   ++ + E +
Sbjct: 241 ISTQRGYQANARTITVTDQMIEELL 265


>gi|163850121|ref|YP_001638164.1| flagellar basal body rod protein [Methylobacterium extorquens PA1]
 gi|240137255|ref|YP_002961724.1| Flagellar basal-body rod protein flgF [Methylobacterium extorquens
           AM1]
 gi|254559266|ref|YP_003066361.1| flagellar basal-body rod protein flgF [Methylobacterium extorquens
           DM4]
 gi|163661726|gb|ABY29093.1| flagellar basal body rod protein [Methylobacterium extorquens PA1]
 gi|240007221|gb|ACS38447.1| Flagellar basal-body rod protein flgF [Methylobacterium extorquens
           AM1]
 gi|254266544|emb|CAX22308.1| Flagellar basal-body rod protein flgF [Methylobacterium extorquens
           DM4]
          Length = 242

 Score =  168 bits (424), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 73/243 (30%), Positives = 137/243 (56%), Gaps = 5/243 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           MQ+S  + L++Q+ALE+RL+T A+N++N  TVGFR  +V FSE++         +++FV 
Sbjct: 1   MQSSLYVALSSQIALEKRLTTTANNVANMATVGFRAEEVSFSELLARSNRG---EVAFVG 57

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
            GK  +S+  G    T + LD A++GDAW  ++ P+   + TRDGR  +  +G L +  G
Sbjct: 58  PGKTTISRAAGPTTKTDSALDVAVQGDAWLGVKGPKGDTLYTRDGRLTMDANGQLRTV-G 116

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
             PV+D    P+ +  +     +G  G I Q    +  +G++S+D      R   + ++ 
Sbjct: 117 GMPVVDPGGGPLLLDPQAGPPVIGRDGSIHQGVNQVGALGVFSIDPKATLTRSGENAVAA 176

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           ++P  P++D + + + +G++E +N N + EM ++I + + F S  T+  E + ++  A++
Sbjct: 177 SLPGRPVQDFTRIGLVQGYVEGANVNPIMEMTRLIAIQRAFESAATMTSEADTTLTGAVK 236

Query: 240 NIA 242
            + 
Sbjct: 237 TLG 239


>gi|118589981|ref|ZP_01547385.1| Flagellar basal-body rod FlgG [Stappia aggregata IAM 12614]
 gi|118437478|gb|EAV44115.1| Flagellar basal-body rod FlgG [Stappia aggregata IAM 12614]
          Length = 262

 Score =  168 bits (424), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 44/262 (16%), Positives = 88/262 (33%), Gaps = 21/262 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----------- 50
             +  I      A +  +  VA+N++N +T  F+  + +FS+++   +            
Sbjct: 1   MKALAIAATGMSAQQMNVEVVANNIANMNTTSFKRSQAEFSDLLYQAERLQGVPNRGGED 60

Query: 51  ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRF 106
              +  Q    V +         GS  +TG + D AL+G  WF +  P    + TR G F
Sbjct: 61  PVPEGAQLGLGVRTAGIRKLHAQGSLTNTGNQFDVALDGRGWFEITGPDDETLFTRAGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE-KGEISQKGKVIATMGLYSVDM 165
               DG LV+  G      +      I            K +     + +  + L +   
Sbjct: 121 NKNADGRLVTIDGYPVEPAIIVPQETIEVVVNESGQVFAKVDGEMAPRELGQLTLSNFAN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +                       +++G+LE SN + + E+  +I   + +
Sbjct: 181 DVGLEPVGGNLFRETEASGSPVSGVAGDPGFGVIRQGYLESSNVDPVKEITALISAQRGY 240

Query: 221 NSITTLIDENEKSMLEAIRNIA 242
              + ++   ++        I 
Sbjct: 241 EMNSKVMKAADEMAGTVTNGIR 262


>gi|212709494|ref|ZP_03317622.1| hypothetical protein PROVALCAL_00536 [Providencia alcalifaciens DSM
           30120]
 gi|212687832|gb|EEB47360.1| hypothetical protein PROVALCAL_00536 [Providencia alcalifaciens DSM
           30120]
          Length = 260

 Score =  168 bits (424), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 87/259 (33%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A +  L  +++N++N  T GF+  +  F +++               
Sbjct: 1   MIRSLWIAKTGLDAQQTNLDVISNNLANVSTNGFKRQRAVFEDLLYQNIRQPGAMSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  +             G+   TGT  D A++G  +  ++ P G    TRDG  
Sbjct: 61  SLPSGLQMGTGARPVATVRIHSQGNLNKTGTTTDIAIKGQGFLHVQMPDGTDAYTRDGAL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +   DG LV++SG   V  +                V        + + I  + L +   
Sbjct: 121 QRNQDGQLVTSSGYQVVPAIMIPENANSLSIARDGTVSVTVYGDNQPQQIGQITLTTFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +            + +  T     + +G LE SN N   E+  MI   + +
Sbjct: 181 DAGLESMGENLYMETASSGAPNESAPGTNGAGLLYQGMLETSNVNVAEELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ +    +
Sbjct: 241 EINSKAVSASDQMLQRLTQ 259


>gi|224534494|ref|ZP_03675070.1| flagellar hook-basal body complex protein [Borrelia spielmanii
           A14S]
 gi|224514171|gb|EEF84489.1| flagellar hook-basal body complex protein [Borrelia spielmanii
           A14S]
          Length = 282

 Score =  168 bits (424), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 47/280 (16%), Positives = 104/280 (37%), Gaps = 38/280 (13%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51
           M        +  +A  ++L  V++N++N D +G++        F E++    ND      
Sbjct: 1   MVRGIYTAASGMMAERRKLDVVSNNLANIDLIGYKKDLSIQKAFPEMLIRRLNDDGLYKF 60

Query: 52  ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101
                     + +  + V   + Y   E G   +TG  LD AL    +F +++  G   T
Sbjct: 61  PKGHLETAPIVGKLGTGVEENEIYTIFEQGPLKTTGNPLDLALTDQGFFVIQTSDGERYT 120

Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI------------- 148
           R+G F +  +G LV+ +G   + +   + ++                             
Sbjct: 121 RNGSFTIGKEGILVTKNGFPVLGEKGYIYLKKNNFKITPQGQIFHNSNFASNPKRLVSEH 180

Query: 149 ---SQKGKVIATMGLYSVDMSQGFVRRENSGIS---PNIPPTPLEDLSGVTVKRGFLEDS 202
               +  +++ T+ + + +  +   ++ NS       +     ++      ++   LE S
Sbjct: 181 ENSWENYELLDTIRIVNFENPRFLKKQGNSLWIDTKTSGKAQEIDVSLRPKIETEALEAS 240

Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           N N++ EM  MI + + + +    I   +  + + I  I 
Sbjct: 241 NVNAVKEMVLMIEINRAYEANQKTIQTEDSLLGKLINEIG 280


>gi|42526518|ref|NP_971616.1| flagellar basal body rod protein FlgG [Treponema denticola ATCC
           35405]
 gi|41816711|gb|AAS11497.1| flagellar basal-body rod protein FlgG [Treponema denticola ATCC
           35405]
 gi|325473456|gb|EGC76651.1| flagellar basal-body rod protein FlgG [Treponema denticola F0402]
          Length = 264

 Score =  168 bits (424), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 48/261 (18%), Positives = 88/261 (33%), Gaps = 22/261 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S           +  + TVA+N++N +T GF+  + +F +++               
Sbjct: 1   MVRSLWTAATGMNTQQANIDTVANNLANVNTSGFKKQRAEFEDLIYQTVKTAGTPATEDT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q              E GS  +TG   D A++G+ +F +    G    TRDG F
Sbjct: 61  ITPVGVQMGHGARLAATQRIFEQGSLQNTGVTSDIAIQGEGFFRVLQYDGTYAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLD---MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
           K+  D  LV+++G   + +                   V  K         +  + LY  
Sbjct: 121 KIDADRQLVTSNGLRVLPEIIFPEGYRENTIAVSRDGRVTVKVGDIDDPIEVGQIELYRF 180

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
             + G     ++                        +  FLE SN +++ EM  MI   +
Sbjct: 181 QNNAGLSAEGSNLFRQTPASGTAIPGRPGFTGFGRTEHKFLEMSNVSTVSEMVNMIVAQR 240

Query: 219 KFNSITTLIDENEKSMLEAIR 239
            +   +  I  ++  +  A+ 
Sbjct: 241 AYEFNSKAIQTSDNMLGTAVS 261


>gi|299066528|emb|CBJ37718.1| Flagellar basal-body rod protein (Distal rod protein) [Ralstonia
           solanacearum CMR15]
          Length = 263

 Score =  168 bits (424), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 46/263 (17%), Positives = 95/263 (36%), Gaps = 22/263 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +  +G     A +  L T+A+N++N +T GF+  +V F+++V      I        
Sbjct: 1   MFDALYVGATGMQAQQLNLDTIANNLANVNTTGFKKSRVSFTDLVAQEAGRIQPTSDASL 60

Query: 56  ---------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGR 105
                     + V         + G+   TG+  D A++G+ +  +  P G    TR G 
Sbjct: 61  GPLSALPGLGAGVGISSVAKLFDTGNMQQTGSSFDVAIQGEGFLEVALPDGSRAFTRGGT 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVD 164
            KV  DG LV+ +G      ++              +V               + L    
Sbjct: 121 LKVNSDGMLVTQAGYVVKPGISVPSNAKDLTIAADGHVRISVPNQSSPIDAGQLELAHFA 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
                + + ++    +              +  T  +GFLE SN   + EM  ++   + 
Sbjct: 181 SPGMLLAQGDNLYRASDTSGEPVVGKAGQDNLGTFAQGFLEGSNVKMIDEMVGLMVAQRA 240

Query: 220 FNSITTLIDENEKSMLEAIRNIA 242
           + +   ++  +++ +   + N+ 
Sbjct: 241 YEANVKVVQASDEILG-MVNNLR 262


>gi|118589943|ref|ZP_01547347.1| flagellar basal body rod protein [Stappia aggregata IAM 12614]
 gi|118437440|gb|EAV44077.1| flagellar basal body rod protein [Stappia aggregata IAM 12614]
          Length = 243

 Score =  168 bits (424), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 80/244 (32%), Positives = 134/244 (54%), Gaps = 4/244 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M+++  + L+AQ+AL  RL TVA N++N +T G+R  +VKF+E+V     D   K+SF  
Sbjct: 1   MESALYVALSAQVALSNRLETVARNVANMNTAGYRADEVKFAELVSKAGQD---KVSFST 57

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLVSASG 119
            G++Y+S++ GS   T   LD A+EG+AWFA+    G +  TRDGR ++ +DG+L + +G
Sbjct: 58  GGEKYISRQYGSLNKTDNPLDLAVEGEAWFAIRDANGNLSYTRDGRLQIGNDGTLRTLTG 117

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
           +  +          P                   +I  +GL+ +       R ENS + P
Sbjct: 118 QQILGAGGQPISLDPDAGTPLITQSGEISQNDVGIIGQVGLFLIPDDAQLTRAENSAVIP 177

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           + P  P++      V++G++E SN N + EM +MI +++ F S T +ID + +S  +AIR
Sbjct: 178 DKPVIPVQTYDTNGVRQGYVEGSNINPVREMTKMIMISRAFESATKMIDTSNESQEKAIR 237

Query: 240 NIAS 243
            + +
Sbjct: 238 ELGA 241


>gi|154710440|gb|ABS84283.1| FlgG-2 [Treponema paraluiscuniculi]
          Length = 271

 Score =  168 bits (424), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 50/267 (18%), Positives = 99/267 (37%), Gaps = 26/267 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKND------ 51
           M   +    +   A + RL  +A N++N DT  ++        F E++    ND      
Sbjct: 1   MIRGWYTAASGMSAQQHRLDAIAQNLANVDTTSYKRDVAVHKSFPELLLRRVNDDGVVKN 60

Query: 52  ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101
                     + +    V   + +   E GS   T +  D ALEG  +F + +P+G   T
Sbjct: 61  PFGSSDVSPIVGKLGLGVEVNELFTEFEQGSLKQTQSPSDIALEGMGFFVIRTPQGEEYT 120

Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMA----SVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157
           R+G F V  +G L++ +G   + +              ++    V         G  +  
Sbjct: 121 RNGNFLVGVEGYLMTKNGYPVLGENGPLFLQERYYTINQNGEIYVRPIDRPDVDGFFLDR 180

Query: 158 MGLYSVDMSQGFVRRENS-GISPNIPPTPL--EDLSGVTVKRGFLEDSNANSMYEMGQMI 214
           + + + +  +   ++     +   +   P+  E        +GF+E SN N + EM +MI
Sbjct: 181 LKIVTFENVRYLQKKGADTYMQTPVSGAPIAAEGPERPAAVQGFVEASNVNVVNEMVRMI 240

Query: 215 HLTQKFNSITTLIDENEKSMLEAIRNI 241
            + + + +    I   +  M      +
Sbjct: 241 EVNRAYEANQKTIQAEDGMMGRLWNEV 267


>gi|77463650|ref|YP_353154.1| flagellar distal rod protein [Rhodobacter sphaeroides 2.4.1]
 gi|126462482|ref|YP_001043596.1| flagellar basal-body rod protein FlgG [Rhodobacter sphaeroides ATCC
           17029]
 gi|221639493|ref|YP_002525755.1| Flagellar basal-body rod protein FlgG [Rhodobacter sphaeroides
           KD131]
 gi|332558506|ref|ZP_08412828.1| FlgG [Rhodobacter sphaeroides WS8N]
 gi|11095160|gb|AAG29749.1|AF205139_1 flagellar distal rod protein [Rhodobacter sphaeroides]
 gi|77388068|gb|ABA79253.1| Flagellar distal rod protein [Rhodobacter sphaeroides 2.4.1]
 gi|126104146|gb|ABN76824.1| flagellar basal-body rod protein FlgG [Rhodobacter sphaeroides ATCC
           17029]
 gi|221160274|gb|ACM01254.1| Flagellar basal-body rod protein FlgG [Rhodobacter sphaeroides
           KD131]
 gi|332276218|gb|EGJ21533.1| FlgG [Rhodobacter sphaeroides WS8N]
          Length = 262

 Score =  168 bits (424), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 44/260 (16%), Positives = 93/260 (35%), Gaps = 22/260 (8%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------- 55
            + ++      A + R+  +++N++N +T GF+  +  F  ++         +       
Sbjct: 4   NAMHVASTGLNAQQTRMQVISNNLANVNTTGFKRDRANFESLLYQTWKPGGAQTSEATAM 63

Query: 56  ------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKV 108
                  + V           GS  +T   LD A++G  +F +  P G +  TR+G F  
Sbjct: 64  TSPSAVGTGVRVVSTEKLYTQGSLANTDNALDLAIDGPGFFQVLMPDGRMGYTRNGTFSQ 123

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDMSQ 167
             +G++ + SG     ++      +         V        + + +  M L +    +
Sbjct: 124 NAEGTITTPSGYVVQPEIQIPEGAVSVTISSDGIVSVLMPDETEAQEVGQMTLATFANPR 183

Query: 168 GFVRR------ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221
           G          E       +   P+E      + +G LE SN N + E+  MI   + + 
Sbjct: 184 GLQPVGETFAVETGASGEAVIGNPVEPG-FGKLVQGSLEASNVNVVQELVDMIETQRAYE 242

Query: 222 SITTLIDENEKSMLEAIRNI 241
             +  I  +++ M      +
Sbjct: 243 VNSKSISASDEMMQYLSNKL 262


>gi|332296516|ref|YP_004438439.1| flagellar basal-body rod protein FlgG [Thermodesulfobium narugense
           DSM 14796]
 gi|332179619|gb|AEE15308.1| flagellar basal-body rod protein FlgG [Thermodesulfobium narugense
           DSM 14796]
          Length = 262

 Score =  168 bits (424), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 83/257 (32%), Gaps = 19/257 (7%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             +     +  ++    +  + +N++N +T GF+T + +F +++                
Sbjct: 1   MRALWTAASGMISQTTNVDVITNNLANVNTTGFKTARAEFEDLMYQEVRPAGATSASGNM 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFK 107
                +                G    TG +LD A++GD +F +  P      TR G F 
Sbjct: 61  LPTGLEIGLGSRPVATVRIFTEGPLQQTGNQLDLAIQGDGFFQVTLPDGSTAYTRAGNFS 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           +   G +V+  G      +      +                   + + T+ L       
Sbjct: 121 LDSAGEIVTPEGYLLQPSIVVPTNAVSISVGKDGSVSAKMQDGTVQDLGTIQLARFINPS 180

Query: 168 GFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNS 222
           G     ++              +  T     V++G LE SN   + EM  +I   + + S
Sbjct: 181 GLTSLGSNLYQSTPASGDAILGTPGTQGIGWVEQGMLEMSNVQVVEEMVNLITAERAYES 240

Query: 223 ITTLIDENEKSMLEAIR 239
               +   ++ + +A  
Sbjct: 241 CAKGMTVCDQMLSDANN 257


>gi|224825166|ref|ZP_03698272.1| flagellar basal-body rod protein FlgG [Lutiella nitroferrum 2002]
 gi|224602837|gb|EEG09014.1| flagellar basal-body rod protein FlgG [Lutiella nitroferrum 2002]
          Length = 260

 Score =  168 bits (424), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 52/259 (20%), Positives = 92/259 (35%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  I      + + +L  V++N++N++T GF+     F ++                
Sbjct: 1   MMRALYIAKTGMDSSQFQLDVVSNNLANSNTKGFKKGHAVFEDLYYQTLRQPGSQLTNGN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  +             G+  ST   LD A+ GD +F ++ P   I  TR+G F
Sbjct: 61  SLPTGLQVGTGSTVVATARIHSQGNLESTEQPLDLAINGDGFFRVQQPDGTIAYTRNGEF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +  ++G +V++SG      +            E   V      S       T+ L +   
Sbjct: 121 RRNENGDIVNSSGYLLDPAINIPANATGITISEAGVVQYTQPNSTAPTTAGTIQLTTFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
            QG      +           +D         +V+ GFLEDSN N   E+  MI   + F
Sbjct: 181 PQGLQSIGQNLYLQTQASGDPQDGDPNTDGRGSVRSGFLEDSNVNVTEELVNMITAQRSF 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  I   ++ +    +
Sbjct: 241 EMNSRAIKTADEMLQRIAQ 259


>gi|167909129|ref|ZP_02496220.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei
           112]
          Length = 262

 Score =  168 bits (424), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 90/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A + ++  +++N++N  T GF+  +  F +++               
Sbjct: 1   MNRSLYIAATGMNAQQAQMDVISNNLANVSTNGFKGSRAVFEDLLYQTVRQPGANSTQQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           GS   TG   D A+ G  +F +  P G    TRDG F
Sbjct: 61  ELPSGLQLGTGVQQVATERLYTQGSLQQTGNSKDVAINGPGFFQVLMPDGTNAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQKGKVIATMGLYSVDM 165
           +    G LV++SG   +  +               V    +  S     I  + + +   
Sbjct: 121 QTNAQGQLVTSSGYQVIPAITIPQNANSLTIGSDGVVSVTQPGSNNAVQIGALQIATFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   +  +  +                   T+K+G++E SN N + E+  MI   + +
Sbjct: 181 PAGLDAKGENLFAETTSSGAPNVSQPGLNGAGTLKQGYVESSNVNVVQELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ +    +
Sbjct: 241 EINSKAVTTSDQMLQTVTQ 259


>gi|302878278|ref|YP_003846842.1| flagellar basal-body rod protein FlgG [Gallionella
           capsiferriformans ES-2]
 gi|302581067|gb|ADL55078.1| flagellar basal-body rod protein FlgG [Gallionella
           capsiferriformans ES-2]
          Length = 260

 Score =  168 bits (424), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 47/259 (18%), Positives = 91/259 (35%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A + ++ T+A+N++N  T GF+  +  F +++               
Sbjct: 1   MIRSLWISKTGLDAQQTQMDTIANNLANVSTNGFKRSRAVFEDLLYQTIRQPGAQSSQQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+   TG +LD A+ G  +F +  P      TRDG F
Sbjct: 61  QIPSGLQIGTGVRPVAAERIHTQGNLQQTGNQLDVAINGSGFFQVLMPDGSTGYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +    G +V+ASG      ++     I         V            + +M + +   
Sbjct: 121 QRDAQGQMVTASGFPVQPAISLPANAITVTIGRDGVVSVTQPGVAAPVQVGSMQVTTFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G + +  +                 T     + + ++E SN N + EM  MI   + +
Sbjct: 181 PAGLMAQGENLYQETASSGTPSTNVPGTNGSGLLSQNYVETSNVNVVEEMVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  I  +++ + +  +
Sbjct: 241 EINSKSITTSDQMLQKLSQ 259


>gi|297183134|gb|ADI19277.1| flagellar basal body rod protein [uncultured delta proteobacterium
           HF0200_39L23]
          Length = 262

 Score =  168 bits (424), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 47/259 (18%), Positives = 92/259 (35%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +         A ++ + T A+N++N +T G++  KV F +++   +           
Sbjct: 1   MMRALYTAATGMAAQQRNIDTTANNLANVNTSGYKKSKVHFQDLLYHNERTAGVPSSVST 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                      V           G+  +TG +LD +++G  +F +  P GI+  +RDG F
Sbjct: 61  QVPVGLHVGHGVKFIGTEKIHTQGNLENTGNDLDISIDGHGFFQILQPNGIVGYSRDGHF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
            +   G LV+  G     ++      +  +      V          + I ++ L     
Sbjct: 121 NIDGMGRLVTNDGMLLDPEINIPQDTRKIEVGFDGTVTVFLRDETMPEAIGSVQLARFQN 180

Query: 166 SQGFVRRENSGISP-----NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +         N         S  ++ +GFLE SN + + EM  MI   + +
Sbjct: 181 PAGLTPIGKNLYVSTPASGNAIVDAPGANSMGSLTQGFLERSNVSLVEEMVNMITSQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  I   ++ +     
Sbjct: 241 EVNSKAIQSADEMLKNTNN 259


>gi|237799211|ref|ZP_04587672.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|330961201|gb|EGH61461.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           maculicola str. ES4326]
 gi|331022066|gb|EGI02123.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 262

 Score =  168 bits (424), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 44/262 (16%), Positives = 97/262 (37%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  +      A +  L+T+++N++N  T GF++ + +F +++  IK           
Sbjct: 1   MLPALYVAKTGLAAQDTNLTTISNNLANVSTTGFKSDRAEFQDLLYQIKRQPGAQSTQDS 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V       +   GS  +T   LD A+ G  +F +  P G    +RDG F
Sbjct: 61  ELPSGLQLGTGVRIVGTQKNFTAGSLQTTNNPLDLAVNGRGFFQVTQPDGTVAYSRDGTF 120

Query: 107 KVTDDGSLVSASGK--YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
            +  +G +V+A+G    P + +           +          +   ++I  +      
Sbjct: 121 HLDANGQIVTANGYALEPAIVVPQAAQTFTVGQDGTVSVTLAGATATPQIIGNIQTADFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +           +  +          +  LE+SN +++ E+  MI   + 
Sbjct: 181 NPAGLQAIGGNLYLETGSSGAPQIGTPGLNGLGPTLQNTLENSNVSTVEELVNMITTQRA 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   ++ +    +N+
Sbjct: 241 YEMNSKVISTADQMLQNLTQNL 262


>gi|153837069|ref|ZP_01989736.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
           AQ3810]
 gi|149749657|gb|EDM60402.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
           AQ3810]
          Length = 261

 Score =  167 bits (423), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 95/255 (37%), Gaps = 20/255 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M ++  +      A + +++ +++N++N +TVGF+  +V F ++  +I+           
Sbjct: 1   MHSALWVSKTGMAAQDTKMTVISNNLANVNTVGFKRDRVVFEDLFYSIQRQPGAQVDQVN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106
                 Q  S V           G+  +T  +LD A+ G  +F +E+    I+ TR+G+F
Sbjct: 61  ELPSGVQLGSGVRVVGTQKVFTQGNTQNTTQDLDLAVMGQGFFQIENSDGQIMYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQI-PQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
            +  +G +V++ G      +                V          + +  + L     
Sbjct: 121 HINSEGLMVNSQGLPLEPQIQIPDNATSFSVGVDGTVTTTTADDPTPQQLGQITLAKFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +         P ++         ++K+G LE SN   + EM  MI   + +
Sbjct: 181 PAGLEAVGGNLFRETEASGPADELIAGADGAGSIKQGALEGSNVQVVEEMVDMITTQRAY 240

Query: 221 NSITTLIDENEKSML 235
                ++   +  + 
Sbjct: 241 EMNAKVVSAADDMLK 255


>gi|319781681|ref|YP_004141157.1| flagellar basal-body rod protein FlgG [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317167569|gb|ADV11107.1| flagellar basal-body rod protein FlgG [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 262

 Score =  167 bits (423), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 42/262 (16%), Positives = 90/262 (34%), Gaps = 21/262 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             +  I      A +  L  +A+N++N +T G++  + +FS+++  +             
Sbjct: 1   MKALAIAATGMNAQQTNLEVIANNIANINTTGYKRARAEFSDLLYQVDRTQGVPNRSNAS 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRF 106
                      V +         G   STG   D AL G  WF +E +  G + +R G  
Sbjct: 61  LVPEGVSIGLGVKTTAVRNVHTQGELTSTGNSFDLALTGRGWFQIEGADGGTLYSRAGAL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE-KGEISQKGKVIATMGLYSVDM 165
                G LV+  G   +  +      +            + +     + +  + + +   
Sbjct: 121 NTNATGQLVTVDGAAVIPAINVPVDAVEVIVNKTGQVFARIDGQTDLQNLGQLQIANFAN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++         P            T+++G+LE SN + + E+ ++I   + +
Sbjct: 181 EAGLAPLGDNLFQETTASGPANVGVPGDPGFATIQQGYLEASNVDPVKEITELISAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNIA 242
              + +I   +       +NI 
Sbjct: 241 EMNSKVIQAADDMASVVSKNIR 262


>gi|242309754|ref|ZP_04808909.1| flagellar basal body rod protein FlgG [Helicobacter pullorum MIT
           98-5489]
 gi|239523755|gb|EEQ63621.1| flagellar basal body rod protein FlgG [Helicobacter pullorum MIT
           98-5489]
          Length = 263

 Score =  167 bits (423), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 46/262 (17%), Positives = 101/262 (38%), Gaps = 23/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +        L  + ++   ++N+SN +T G+R  + +F+++   +            
Sbjct: 1   MMRALYTATTGMLGQQLQIDVTSNNISNVNTFGYRKERAEFADLFHQVLQYAGSSTSETT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                      V           G+F  T   LD A+ G+ +F +E P   I  TRDG F
Sbjct: 61  LSPTGIEVGLGVRPTSVQKIFSQGNFKETENNLDIAITGNGFFQIELPDGTIAYTRDGSF 120

Query: 107 KVTDDGSLVSASGK--YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
           K+ D+G++V++ G    P + +     Q+    +      +G  ++  + +  +   +  
Sbjct: 121 KLDDEGNVVNSQGYLLVPNITIPDDATQVNIGTDGTVTVVQGNETEVNE-LGQIETVNFI 179

Query: 165 MSQGFVRRENSGI-SPNIPPTP----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G     ++   + N    P            +++GF+E SN   + EM  +I   + 
Sbjct: 180 NPAGLHALGDNLYLNTNASGDPIVGTPGLNGFGQLRQGFVETSNVKLVEEMTDLIVGQRA 239

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           + + +  I   +  + + +  +
Sbjct: 240 YEANSKSIQTADSML-QIVNQL 260


>gi|77918760|ref|YP_356575.1| flagellar basal body rod protein FlgG [Pelobacter carbinolicus DSM
           2380]
 gi|77544843|gb|ABA88405.1| flagellar biosynthesis protein [Pelobacter carbinolicus DSM 2380]
          Length = 261

 Score =  167 bits (423), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 45/261 (17%), Positives = 87/261 (33%), Gaps = 21/261 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +         A +  +  +A N++N ++ GF+  +  F +++               
Sbjct: 1   MIRALWTSATGMEAQQVNMDVIAHNLANVNSAGFKKSRADFQDILYQTVKVAGSDGSSGV 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRF 106
                 Q                G F  TG +LD A+EG  +F +  +      TR G F
Sbjct: 61  EQPTSIQVGLGSRVAAIQKVFTTGDFQQTGNDLDIAIEGSGFFEITLANGDTAYTRAGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEK-GEISQKGKVIATMGLYSVDM 165
           K    G +V++ G     ++             +   E   +       I T+ L     
Sbjct: 121 KKDGTGRIVTSDGYPLSPEIIIPENATQVSIGNYGAVEVLLDGQNTPTQIGTITLTRFSN 180

Query: 166 SQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++  +              +    ++ +GFLE SN + M EM  MI   + +
Sbjct: 181 PAGLNSIGHNLFTETPTTGTPVTGNPGEDGFGSLSQGFLEGSNVSIMEEMVNMIAGQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
              +  I   ++ + +   N+
Sbjct: 241 EINSKAIKTADEML-QMTNNL 260


>gi|158321569|ref|YP_001514076.1| hypothetical protein Clos_2549 [Alkaliphilus oremlandii OhILAs]
 gi|158141768|gb|ABW20080.1| protein of unknown function DUF1078 domain protein [Alkaliphilus
           oremlandii OhILAs]
          Length = 264

 Score =  167 bits (423), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 50/264 (18%), Positives = 103/264 (39%), Gaps = 24/264 (9%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             +     +   A +  + T+++N++N +T G++  KV+F +++ A     +        
Sbjct: 1   MRALWTAASGMKAQQLNMDTISNNLANVNTTGYKKQKVEFKDLLYANMRTTNLVDGEGSP 60

Query: 54  ---QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVT 109
              Q    V           G+   T    D A+ G+ +F +E+P G    TRDG FK++
Sbjct: 61  VNLQVGHGVMPVATTRLFTTGNLERTDNPFDMAINGEGFFVIEAPSGDRFYTRDGNFKLS 120

Query: 110 DDG--SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG-----KVIATMGLYS 162
            +G    +  S  Y V+      I      +   V   G I+ +      + IAT+ L +
Sbjct: 121 VEGDEMRLVTSDGYTVVSEFEDAIYFDGTMKEITVNANGLITAETEDGEIEEIATIALAN 180

Query: 163 VDMSQGFVRRENSGISPNIPP----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
               +G +    +     +         E+     + + +LE SN   + EM ++I   +
Sbjct: 181 FINPEGLLAVGKNLYKETVASGEAVFMEEEARTSDIVQNYLETSNVQIVDEMVRLITAQR 240

Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242
            +   +  I  +++ +     N+ 
Sbjct: 241 AYEINSKAIQTSDEMLG-IANNLR 263


>gi|157160605|ref|YP_001457923.1| flagellar basal body rod protein FlgG [Escherichia coli HS]
 gi|170020526|ref|YP_001725480.1| flagellar basal body rod protein FlgG [Escherichia coli ATCC 8739]
 gi|312971215|ref|ZP_07785393.1| flagellar basal-body rod protein FlgG [Escherichia coli 1827-70]
 gi|157066285|gb|ABV05540.1| flagellar basal-body rod protein FlgG [Escherichia coli HS]
 gi|169755454|gb|ACA78153.1| flagellar basal-body rod protein FlgG [Escherichia coli ATCC 8739]
 gi|310336417|gb|EFQ01603.1| flagellar basal-body rod protein FlgG [Escherichia coli 1827-70]
          Length = 260

 Score =  167 bits (423), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 41/259 (15%), Positives = 88/259 (33%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M +S  I      A +  +  +A+N++N  T G++  +  F +++               
Sbjct: 1   MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGYKRQRAVFEDLLYQTIRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+   T    D A++G  +F +  P      TRDG F
Sbjct: 61  TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGSSAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V  +G LV+A G      +      +         V    +       +  + L +   
Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +  +         + +        + +G++E SN N   E+  MI + + +
Sbjct: 181 DTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +   ++ + +  +
Sbjct: 241 EINSKAVSTTDQMLQKLTQ 259


>gi|260767925|ref|ZP_05876859.1| flagellar basal-body rod protein FlgG [Vibrio furnissii CIP 102972]
 gi|260615955|gb|EEX41140.1| flagellar basal-body rod protein FlgG [Vibrio furnissii CIP 102972]
 gi|315179628|gb|ADT86542.1| flagellar basal-body rod protein FlgG [Vibrio furnissii NCTC 11218]
          Length = 261

 Score =  167 bits (423), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 44/261 (16%), Positives = 100/261 (38%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M ++  +      A + +++ +++N++N +TVGF+  +V F ++  +I+           
Sbjct: 1   MHSALWVSKTGMAAQDTKMTAISNNLANVNTVGFKRDRVVFEDLFYSIQRQPGAQVDQVN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106
                 Q  S V           G+  +TG +LD A+ G  +F +E+    I+ +R+G+F
Sbjct: 61  ELPTGVQLGSGVRVVGTQKVFTQGNTQNTGQDLDLAVMGQGFFQIENSDGQIMYSRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ-KGKVIATMGLYSVDM 165
            V  +G +V++ G      +      I     +         +    + +  + L     
Sbjct: 121 HVNSEGLMVNSQGLPLQPQIQVPDDAISLSVGVDGTVTITTAADSTPQELGQITLAKFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +           ++         ++K+G LE SN   + EM  MI   + +
Sbjct: 181 PAGLEALGGNLFRETEASGAADELIAGEDGVGSIKQGVLEGSNVQVVEEMVDMITTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
                ++   +  +    +++
Sbjct: 241 EMNAKVVSAADDMLKFVAQSV 261


>gi|330899406|gb|EGH30825.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           japonica str. M301072PT]
          Length = 262

 Score =  167 bits (423), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 44/262 (16%), Positives = 96/262 (36%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  +      A +  L+T+++N++N  T GF++ + +F +++  IK           
Sbjct: 1   MLPALYVAKTGLAAQDTNLTTISNNLANVSTTGFKSDRAEFQDLLYQIKRQPGAQSTQDS 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           GS  +T   LD A+ G  +F +  P   I  +RDG F
Sbjct: 61  ELPSGLQLGTGVRIVGTQKKFTAGSLQTTNNPLDLAVNGRGFFQVTQPDGTIAYSRDGTF 120

Query: 107 KVTDDGSLVSASGK--YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
            +  +G +V+A+G    P + +           +          +   ++I  +      
Sbjct: 121 HLDANGQIVTANGYALEPAIVVPQNAQTFTVGQDGTVSVTLAGATATPQIIGNIQTADFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +           +  +          +  LE+SN +++ E+  MI   + 
Sbjct: 181 NPAGLQAMGGNLYLETGSSGAPQIGTPGLNGLGPTLQNTLENSNVSTVEELVNMITTQRA 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   ++ +    +N+
Sbjct: 241 YEMNSKVISTADQMLQNLTQNL 262


>gi|110632662|ref|YP_672870.1| flagellar basal body rod protein FlgF [Mesorhizobium sp. BNC1]
 gi|110283646|gb|ABG61705.1| flagellar basal body rod protein [Chelativorans sp. BNC1]
          Length = 239

 Score =  167 bits (423), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 91/243 (37%), Positives = 144/243 (59%), Gaps = 4/243 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           MQT   + L++Q+ALE+RL+T+ADN++N  TVGFR   + FS+V+  +  +    +SFV+
Sbjct: 1   MQTGLYVALSSQMALERRLATLADNVANAGTVGFRAGGITFSDVMSGLSEEA---VSFVS 57

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           +G  +     G    TG+  DFA++GDAWFA+E+P G ++TRDGRF + + G LV+  G 
Sbjct: 58  TGSNFYDTRAGGLRETGSPFDFAVQGDAWFAVETPAGPVMTRDGRFTMRETGELVTLEGH 117

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
              LD    P+ +  +      G  G + Q G++I  +GL+S        R  NSG  P+
Sbjct: 118 AV-LDAGGAPLVLDPQAGPPEAGADGILRQNGQLIGAIGLFSFTPGPNATRFGNSGFLPD 176

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
             P P+ D   V + +GFLEDSN N + EM ++I + + F  +T L+ +++ SM +AI+ 
Sbjct: 177 TRPQPVVDQPDVGIAQGFLEDSNVNPVNEMMRLIQVQRTFEQVTALMRDSDTSMKDAIQA 236

Query: 241 IAS 243
           + S
Sbjct: 237 MGS 239


>gi|293414371|ref|ZP_06657020.1| flagellar basal-body rod protein FlgG [Escherichia coli B185]
 gi|291434429|gb|EFF07402.1| flagellar basal-body rod protein FlgG [Escherichia coli B185]
          Length = 260

 Score =  167 bits (423), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 41/259 (15%), Positives = 87/259 (33%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M +   I      A +  +  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MISLLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+   T    D A++G  +F +  P      TRDG F
Sbjct: 61  TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGSSAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V  +G LV+A G      +      +         V    +       +  + L +   
Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +  +         + +        + +G++E SN N   E+  MI + + +
Sbjct: 181 DTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +   ++ + +  +
Sbjct: 241 EINSKAVSTTDQMLQKLTQ 259


>gi|154253004|ref|YP_001413828.1| flagellar basal body rod protein [Parvibaculum lavamentivorans
           DS-1]
 gi|154156954|gb|ABS64171.1| flagellar basal body rod protein [Parvibaculum lavamentivorans
           DS-1]
          Length = 256

 Score =  167 bits (423), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 67/245 (27%), Positives = 133/245 (54%), Gaps = 6/245 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG--AIKNDIDQKISF 58
           M+ +  IGL+ Q+A+ + ++T+A+N++N +T  +++  + F E +   A ++  D  I F
Sbjct: 14  MENALLIGLSRQMAMSREMATIANNIANMNTTAYKSEAMLFEEFLAKDASEDSPDSTIRF 73

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSAS 118
           V    ++ +   G+  +TG   D A+ G+ +F +E+ +G++ TR+G F++  DG LV+++
Sbjct: 74  VQDVGQHRNLRDGALQTTGNPFDVAITGEGFFRVETGQGVLYTRNGNFQLDADGQLVTSN 133

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178
           G  P+L  A  PI   + +    +   G IS    +   + + + +  Q   +  NS +S
Sbjct: 134 GD-PILTDAGTPITFARDEIGITIARDGTISSDRGLRGKLAIVTFENQQEMRKAGNSLLS 192

Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
                 P E+   + + +G LE SN N + EM  MI +T+ + S   LID+ ++   +AI
Sbjct: 193 TAQEEVPAEN---IRLVQGALEGSNVNPILEMTNMIEVTRSYASAQKLIDQADQMRRKAI 249

Query: 239 RNIAS 243
           +++ +
Sbjct: 250 QDLGA 254


>gi|332531620|ref|ZP_08407517.1| flagellar basal-body rod FlgG [Hylemonella gracilis ATCC 19624]
 gi|332038983|gb|EGI75412.1| flagellar basal-body rod FlgG [Hylemonella gracilis ATCC 19624]
          Length = 259

 Score =  167 bits (423), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 93/256 (36%), Gaps = 19/256 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  S  I      A +++L T+++N++N+ T GF+   V F +++           S   
Sbjct: 1   MFNSLWIAKTGMEAQQRQLDTISNNLANSSTNGFKRSSVVFEDLMYQNLRTAGSPSSEQT 60

Query: 61  SGKE------------YLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFK 107
           +                        +  G  LD A+ G+ +F +  P G    TRDG  +
Sbjct: 61  NLPTGLQVGLGARAVATSRNYTQGNLVQGRPLDVAINGNGFFQVSMPDGTTQYTRDGALE 120

Query: 108 VTDDGSLVSASGKYPVLD-MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           ++  G+LV+++G       +           +   V  K       + I  + L +    
Sbjct: 121 ISATGALVTSNGLPLADGIVIPPNASDLSIADDGTVTAKLPGQTVAQTIGNITLATFINP 180

Query: 167 QGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221
            G   +  +  +           +        + +G+LE SN N + E+  MI   + + 
Sbjct: 181 AGLEAKGQNLFAETAASGTPNTGAPSANGIGKLMQGYLESSNVNVVQELVTMIQTQRAYE 240

Query: 222 SITTLIDENEKSMLEA 237
             +  I  +++ + + 
Sbjct: 241 MNSKAIQTSDQMLQKL 256


>gi|148266116|ref|YP_001232822.1| flagellar basal body rod protein FlgG [Geobacter uraniireducens
           Rf4]
 gi|146399616|gb|ABQ28249.1| flagellar basal-body rod protein FlgG [Geobacter uraniireducens
           Rf4]
          Length = 262

 Score =  167 bits (423), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 89/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +     +   A +  +  VA+N++N +T GF+  +  F +++               
Sbjct: 1   MIRALWTAASGMQAQQLNIDVVANNLANVNTTGFKKSRADFQDLMYQNLKTSGAPSTNAT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q      +         G+   TG E+D A+EG+ +F ++ P      +R G F
Sbjct: 61  QIPTGIQVGLGSKAAAVSKIFTAGNITQTGNEMDLAIEGEGFFQIQMPDGSTNYSRAGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQKGKVIATMGLYSVDM 165
           K    G +V++ G   + ++                    +        + T+ L +   
Sbjct: 121 KKDSQGRMVNSDGYPLLPEVIIPNNATKITVGNDGTVSVMQSGQNTPTSVGTIQLATFSN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++   P                  T+ +GFLE SN + M EM  MI   + +
Sbjct: 181 PAGLSSLGHNLYQPTDSSGAATTGTSGQNGIGTLSQGFLEMSNVSVMEEMVNMIVGQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +   ++ +  A  
Sbjct: 241 EINSKAVQAADEMLQTANN 259


>gi|330808197|ref|YP_004352659.1| flagellar basal-body rod protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327376305|gb|AEA67655.1| flagellar basal-body rod protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 261

 Score =  167 bits (423), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 50/261 (19%), Positives = 96/261 (36%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  +      A +  L+T+++N++N  T GF+  + +F +++  +K           
Sbjct: 1   MLPALWVAKTGLSAQDTNLTTISNNLANVSTTGFKRDRAEFQDLLYQVKRQPGAQSTQDS 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                 Q  + V       +   GS  +T   LD A++G  +F +  P G    TRDG F
Sbjct: 61  ELPSGLQVGTGVRIVGTQKNFTAGSLQTTEQPLDMAIDGRGFFQILQPDGTTSYTRDGTF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
            +  +G +V+ASG      +      Q         V      +   +VI  +       
Sbjct: 121 HLDSNGQIVNASGFALEPAIIIPNDAQTFTVGRDGTVSITVAGNPASQVIGNLQTADFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     N+           +          T  +  LE SN +++ EM  MI   + +
Sbjct: 181 PAGLQAVGNNLFLETAASGAPQVGTPGLNGFGTTLQNTLETSNVSTVEEMVNMITTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
              + +I   ++ +    +N+
Sbjct: 241 EMNSKVISTADQMLSFVTQNL 261


>gi|307131607|ref|YP_003883623.1| flagellar basal-body rod protein flgG [Dickeya dadantii 3937]
 gi|306529136|gb|ADM99066.1| Flagellar basal-body rod protein flgG [Dickeya dadantii 3937]
          Length = 260

 Score =  167 bits (423), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 85/259 (32%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A +  +  +++N++N  T GF+  +  F +++               
Sbjct: 1   MIRSLWIAKTGLNAQQTNMDVISNNLANVSTNGFKRQRAVFEDLMYQTVRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                 Q  + V           GSF  TG   D A++G  +F +  P G    TRDG F
Sbjct: 61  TLPSGLQLGTGVRPVATERIHTQGSFSETGNVKDLAIKGAGFFQVLMPDGTTSYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +   +G LV++SG      +                V    +       I  + L     
Sbjct: 121 QQDSNGQLVTSSGFQVQPAITIPANSSNLTVGRDGVVTVTQQGQTAPVQIGQLNLAMFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +  +           +        + + F+E SN N   E+  MI   + +
Sbjct: 181 EAGLENLGENLYAETASSGAPTQSTPGLNGAGLIYQKFVETSNVNVAEELVSMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  I   ++ + +  +
Sbjct: 241 EINSKAISSTDQMLQKLTQ 259


>gi|317121025|ref|YP_004101028.1| flagellar basal-body rod protein FlgF [Thermaerobacter marianensis
           DSM 12885]
 gi|315591005|gb|ADU50301.1| flagellar basal-body rod protein FlgF [Thermaerobacter marianensis
           DSM 12885]
          Length = 249

 Score =  167 bits (423), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 47/250 (18%), Positives = 96/250 (38%), Gaps = 12/250 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIK---VKFSEVVGAIKN-----DI 52
           M        +  LA   +   +A++++N +T G++  +     F E+  A         +
Sbjct: 1   MLRGLYTAASGMLARVLQQERLANDLANVNTPGYKASRNVTEAFPELFVARLERAGAAPV 60

Query: 53  DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDG 112
               +     +  L    G ++ TG   D AL GD +F +  P G   TR G F V  +G
Sbjct: 61  GPVGTGAVVAEPGLDLTAGPWLETGRPQDLALAGDGFFVVMGPAGPAYTRAGNFTVGPEG 120

Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172
            L +  G   +         +      F V   G++   G V+ T+   +        + 
Sbjct: 121 YLQTPDGWPVLGTDGQP---LLVGTADFTVTPDGQVQAGGVVVGTVARVTFANPAALRKA 177

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            ++ +       P   +    V++G LE SN + +  + +M+   + F +    +   ++
Sbjct: 178 GDNLLVDPGGAGPAVPVDTP-VRQGVLEQSNVDPVRTVVEMLANFRAFEASQRAVQAQDQ 236

Query: 233 SMLEAIRNIA 242
           ++  AI+ + 
Sbjct: 237 TLGLAIQEVG 246


>gi|221199741|ref|ZP_03572784.1| flagellar basal-body rod protein FlgG [Burkholderia multivorans
           CGD2M]
 gi|221208654|ref|ZP_03581654.1| flagellar basal-body rod protein FlgG [Burkholderia multivorans
           CGD2]
 gi|221171465|gb|EEE03912.1| flagellar basal-body rod protein FlgG [Burkholderia multivorans
           CGD2]
 gi|221179980|gb|EEE12384.1| flagellar basal-body rod protein FlgG [Burkholderia multivorans
           CGD2M]
          Length = 262

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 90/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A + ++  +++N++N  T GF+  +  F +++               
Sbjct: 1   MNRSLYIAATGMNAQQAQMDVISNNLANVSTNGFKGSRAVFEDLLYQTIRQPGANSTQQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           GS   TG   D A+ G  +F +  P G    TRDG F
Sbjct: 61  ELPSGLQLGTGVQQVATERLYTQGSLTQTGNSKDVAINGSGFFQVLMPDGTNAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +    G LV++SG   +  +            +   V      S     I ++ + +   
Sbjct: 121 QTNAQGQLVTSSGYQILPAITVPQNATSLTIGKDGVVSVTQPGSSNAVQIGSLQIATFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   +  +  +                   T+ +G++E SN N + E+  MI   + +
Sbjct: 181 PAGLEAKGENLFAETTSSGAPNVSQPGLNGAGTLNQGYVEASNVNVVQELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ +    +
Sbjct: 241 EINSKAVTTSDQMLQTVTQ 259


>gi|42526517|ref|NP_971615.1| flagellar basal-body rod protein FlgG [Treponema denticola ATCC
           35405]
 gi|41816710|gb|AAS11496.1| flagellar basal-body rod protein FlgG [Treponema denticola ATCC
           35405]
          Length = 270

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 55/266 (20%), Positives = 102/266 (38%), Gaps = 26/266 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTI---KVKFSEVVGAIKND------ 51
           M   +    +  LA +++L  +++N++N DT  F+     +  F E++    ND      
Sbjct: 1   MVRGWYTAASGMLAQQRQLDVISNNLANLDTTSFKRDVSVQKSFPELLLRRLNDDGVIKN 60

Query: 52  ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101
                     I +    V + + +   E GS   T +  D ALEG  +FA+E+P G   T
Sbjct: 61  PFGSSDIAPIIGKLGLGVETNEIFTEFEQGSLKQTSSPADLALEGQGFFAVETPYGEKYT 120

Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMA----SVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157
           R+G F +  +G L++  G   + +              +D    V    E       +  
Sbjct: 121 RNGNFMIGVEGYLMTKEGYPVMGENGRIFLQDMEYKINQDGQIYVRPITEPESDSVYLDR 180

Query: 158 MGLYSVDMSQGFVRRENSGISPN---IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMI 214
           + +   +  +   +  +S              E  S   V +GF+E SN N + EM +MI
Sbjct: 181 LKIVEFENDRYLSKNGSSFYLDTPLSGKAIAAEGPSRPVVVQGFIEASNVNVVNEMVRMI 240

Query: 215 HLTQKFNSITTLIDENEKSMLEAIRN 240
            + + + +    I   +  M +    
Sbjct: 241 EVNRAYEANQKSIQAEDTMMAKLWNE 266


>gi|302338304|ref|YP_003803510.1| flagellar basal-body rod protein FlgG [Spirochaeta smaragdinae DSM
           11293]
 gi|301635489|gb|ADK80916.1| flagellar basal-body rod protein FlgG [Spirochaeta smaragdinae DSM
           11293]
          Length = 264

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 51/258 (19%), Positives = 93/258 (36%), Gaps = 24/258 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S     +     +  + T+++N+SN +T GF+  +  F +++               
Sbjct: 1   MMRSLWTAASGMTGQQFNIDTISNNLSNVNTTGFKKNRADFEDLLYQTSRVAGTPATELT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                      V           G+  +TG   D A++GD +F +    G    +RDG F
Sbjct: 61  TVPTGVQVGHGVKVAATQKMFTQGALQNTGNVTDLAIQGDGFFRVLLIDGSYGYSRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI---SQKGKVIATMGLYSV 163
           K+  +G LV+++G   + ++            I   G        +     +  + LY  
Sbjct: 121 KIDSNGQLVNSNGHRLIPEVVLPENFERDSLTISQDGRITVKVAGNDDPVQVGQLELYRF 180

Query: 164 DMSQGFVR------RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217
               G         +  +     IP  P  D  G TV + FLE SN + + EM  MI   
Sbjct: 181 VNPAGLSAIGQNNFKITNASGDAIPGRPGFDGMGQTV-QRFLEMSNVSVVQEMVNMIVAQ 239

Query: 218 QKFNSITTLIDENEKSML 235
           + +   +  I  ++  + 
Sbjct: 240 RAYELNSKAIQTSDTMLG 257


>gi|203288202|ref|YP_002223217.1| flagellar hook-basal body complex protein [Borrelia recurrentis A1]
 gi|201085422|gb|ACH94996.1| flagellar hook-basal body complex protein [Borrelia recurrentis A1]
          Length = 291

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 51/280 (18%), Positives = 103/280 (36%), Gaps = 38/280 (13%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKND------ 51
           M        +  +A   RL  +A+N++N D  G++        F E++    ND      
Sbjct: 10  MVRGIYTAASGMIAQRHRLEVIANNLANIDLTGYKKDLSVQKAFPEMLIRRTNDDGLYKF 69

Query: 52  ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101
                     + +  + V   + Y S E GS   TG  LD AL  + +F +++P G   T
Sbjct: 70  PKGYLETAPVVGKLGTGVEENEIYTSFEQGSLKITGNPLDLALTEEGFFVVQTPEGERYT 129

Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV------- 154
           R+G F +  +G L++  G   + +   + I+                + +          
Sbjct: 130 RNGSFTLGREGILITKDGYPVIGEKGYIHIKDNNFKITEQGQIFHNSTFESNPKRLVSES 189

Query: 155 ---------IATMGLYSVDMSQGFVRRENSGISPNI---PPTPLEDLSGVTVKRGFLEDS 202
                    +  + + + + ++   ++ +S             +   S   ++ G LE S
Sbjct: 190 ENSWENYELLDNLKIVNFEKARFLKKQGSSLWYSTEISGQAKNIPINSRPKIESGVLECS 249

Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           N N++ EM  MI + + + +    I   +  + + I  I 
Sbjct: 250 NVNAINEMVSMITVNRVYEANQKTIQTEDTLLGKLINEIG 289


>gi|163803171|ref|ZP_02197054.1| putative flagellar basal-body rod protein [Vibrio sp. AND4]
 gi|159173071|gb|EDP57904.1| putative flagellar basal-body rod protein [Vibrio sp. AND4]
          Length = 261

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 45/261 (17%), Positives = 99/261 (37%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M ++  +      A + +++ +++N++N +TVGF+  +V F ++  +I+           
Sbjct: 1   MHSALWVSKTGMAAQDTKMTAISNNLANVNTVGFKRDRVVFEDLFYSIQRQPGAQVDQVN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106
                 Q  S V           G+  +T  ELD A+ G  +F +E+    I+ TR+G+F
Sbjct: 61  ELPSGVQLGSGVRVVGTQKVFTQGNTQNTTQELDLAVMGQGFFQIENSDGQIMYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
            +  +G +V++ G      +      I     +   V          + +  + L     
Sbjct: 121 HINSEGLMVNSQGLPLEPQIQIPDDAISFSVGVDGTVTTTSADDPNPQQLGQISLAKFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +           ++         ++K+G LE SN   + EM  MI   + +
Sbjct: 181 PAGLEAVGGNLFRETAASGSADELIAGEDGAGSIKQGALEGSNVQVVEEMVDMITTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
                ++   +  +    +++
Sbjct: 241 EMNAKVVSAADDMLKFVAQSM 261


>gi|260466619|ref|ZP_05812807.1| flagellar basal-body rod protein FlgG [Mesorhizobium opportunistum
           WSM2075]
 gi|259029625|gb|EEW30913.1| flagellar basal-body rod protein FlgG [Mesorhizobium opportunistum
           WSM2075]
          Length = 262

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 43/262 (16%), Positives = 91/262 (34%), Gaps = 21/262 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             +  I      A +  L  +A+N++N +T G++  + +FS+++  +             
Sbjct: 1   MKALAIAATGMNAQQTNLEVIANNIANINTTGYKRARAEFSDLLYQVDRTQGVPNRSNAS 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRF 106
                      V +         G   STG   D AL G  WF +E +  G + +R G F
Sbjct: 61  LVPEGVSIGLGVKTTAVRNVHTQGELTSTGNSFDMALTGRGWFQIEGADGGTLYSRAGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE-KGEISQKGKVIATMGLYSVDM 165
                G LV+  G   +  +      +            + +     + +  + + +   
Sbjct: 121 NTNATGQLVTVDGASVIPAINVPVDAVEVIVNKTGQVFARIDGQTDLQNLGQLQIANFAN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++         P            T+++G+LE SN + + E+ ++I   + +
Sbjct: 181 EAGLAPLGDNLFQETTASGPANVGVPGDPGFATIQQGYLEASNVDPVKEITELISAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNIA 242
              + +I   +       +NI 
Sbjct: 241 EMNSKVIQAADDMASVVSKNIR 262


>gi|66046704|ref|YP_236545.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           syringae B728a]
 gi|63257411|gb|AAY38507.1| Flagellar basal body rod protein:Protein of unknown function
           DUF1078 [Pseudomonas syringae pv. syringae B728a]
          Length = 262

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 44/262 (16%), Positives = 97/262 (37%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  +      A +  L+T+++N++N  T GF++ + +F +++  IK           
Sbjct: 1   MLPALYVAKTGLAAQDTNLTTISNNLANVSTTGFKSDRAEFQDLLYQIKRQPGAQSTQDS 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V       +   GS  +T   LD A+ G  +F +  P   I  +RDG F
Sbjct: 61  ELPSGLQLGTGVRIVGTQKNFTAGSLQTTNNPLDLAVNGRGFFQVTQPDGTIAYSRDGTF 120

Query: 107 KVTDDGSLVSASGK--YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
            +  +G +V+A+G    P + +           +          +   ++I  +      
Sbjct: 121 HLDANGQIVTANGYALEPAIVVPQNAQTFTVGQDGTVSVTLAGATATPQIIGNIQTADFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +           +  +          +  LE+SN +++ E+  MI   + 
Sbjct: 181 NPAGLQAIGGNLYLETGSSGAPQIGTPGLNGLGPTLQNTLENSNVSTVEELVNMITTQRA 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   ++ +    +N+
Sbjct: 241 YEMNSKVISTADQMLQNLTQNL 262


>gi|229591869|ref|YP_002873988.1| flagellar basal body rod protein FlgG [Pseudomonas fluorescens
           SBW25]
 gi|229363735|emb|CAY51140.1| flagellar basal-body rod protein [Pseudomonas fluorescens SBW25]
          Length = 261

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 49/261 (18%), Positives = 95/261 (36%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  +      A +  L+T+++N++N  T GF+  + +F +++  IK           
Sbjct: 1   MLPALWVAKTGLSAQDTNLTTISNNLANVSTTGFKRDRAEFQDLLYQIKKQPGAQSTQDS 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                 Q  + V       +   G+   TG  LD A+ G  +F +  P G    TRDG F
Sbjct: 61  ELPSGLQLGTGVQIVGTQKNFSAGNLQQTGQPLDMAINGRGFFQILQPDGTTSYTRDGTF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
            +  +G +V+A+G      +      +         V      +   +VI  +       
Sbjct: 121 HLDSNGQIVTANGFALEPAVVVPADAKTFTVGNDGTVSITVAGNPASQVIGNLQTADFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     N+           +          T  +  LE SN +++ EM  MI   + +
Sbjct: 181 PAGLQAMGNNLFLETASSGAPQIGTPGLNGFGTTLQSTLETSNVSTVEEMVNMITTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
              + +I   ++ +    +N+
Sbjct: 241 EMNSKVISTADQMLSFVTQNL 261


>gi|315124200|ref|YP_004066204.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni ICDCCJ07001]
 gi|315017922|gb|ADT66015.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni ICDCCJ07001]
          Length = 263

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 40/262 (15%), Positives = 96/262 (36%), Gaps = 22/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S +      +A + ++   ++N++N +T GF+  + +F++++  +            
Sbjct: 1   MMRSLHTAATGMVAQQTQIDVTSNNIANVNTAGFKKSRAEFADLMYQVMKYAGTSTSATT 60

Query: 56  ---------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGR 105
                    +    +    +  E     ++   LD A+ G+ +F ++ P G I  TR+G+
Sbjct: 61  LSPSGIEVGVGVRPTAVTKVFTEGNLKSTSTDGLDMAIAGNGFFQIQLPDGTIGYTRNGQ 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVD 164
           F   ++G++V++ G   + +M                        Q+   I  + L    
Sbjct: 121 FTKDNEGNIVNSDGYRLLPEMTIPEGATAINVATDGTVSVMLPGEQQETQIGQVELVRFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G     ++                      T++ GF+E SN   + EM  +I   + 
Sbjct: 181 NPAGLHSMGDNLYLETGASGAPVAGIAGQDGLGTIRHGFIELSNVQLVEEMTDLITGQRA 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           + + +  I  ++  +   +  +
Sbjct: 241 YEAGSKAITTSDDMLG-IVNQL 261


>gi|157959900|ref|YP_001499934.1| flagellar basal-body rod protein FlgG [Shewanella pealeana ATCC
           700345]
 gi|157844900|gb|ABV85399.1| flagellar basal-body rod protein FlgG [Shewanella pealeana ATCC
           700345]
          Length = 261

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 46/261 (17%), Positives = 103/261 (39%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           MQ++  +      A + +++T+A+N++N +T GF+  +V F+++   ++           
Sbjct: 1   MQSALWVSKTGLTAQDTKMTTIANNLANVNTTGFKRDRVAFNDLFYQVQRQPGGQVDEQN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106
                 Q  +             G  ++T  +LD A+EG  +F +E     +  TRDG+F
Sbjct: 61  QLPAGLQLGTGTRVAGTQKVFTPGDMLTTNQQLDLAIEGQGFFQIEEANGDVSFTRDGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
               DG +V++ G   V ++      +         V  +       + +  + L +   
Sbjct: 121 YRDSDGLMVTSQGLPLVPNIQIPDEALTVTIASDGIVSAQMAGQADSQELGQITLVNFTN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   R ++            +      +   V++G LE +N N + EM +MI   + +
Sbjct: 181 PAGLEARGSNLYRETGASGAAIEGIAGDEALGQVRQGALEGANVNVVEEMVEMISTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
                ++  ++  +    + +
Sbjct: 241 EMNAKVVSASDDMLKFLNQAL 261


>gi|167568109|ref|ZP_02361025.1| flagellar basal body rod protein FlgG [Burkholderia oklahomensis
           EO147]
 gi|167574227|ref|ZP_02367101.1| flagellar basal body rod protein FlgG [Burkholderia oklahomensis
           C6786]
          Length = 262

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 90/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A + ++  +++N++N  T GF+  +  F +++               
Sbjct: 1   MNRSLYIAATGMNAQQSQMDVISNNLANVSTNGFKGSRAVFEDLLYQTVRQPGANSTQQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           G+   TG   D A+ G  +F +  P G    TRDG F
Sbjct: 61  ELPSGLQLGTGVQQVATERLYTQGALQQTGNSKDVAINGQGFFQVLMPDGTNAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQKGKVIATMGLYSVDM 165
           +    G LV++SG   +  +               V    +  S     I  + + +   
Sbjct: 121 QTNAQGQLVTSSGYQVIPAITIPQNATSLTIGSDGVVSVTQPGSNNAVQIGALQVATFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   +  +  +                   T+K+G++E SN N + E+  MI   + +
Sbjct: 181 PAGLDAKGENLFAETTSSGQPNVSQPGLNGAGTLKQGYVEASNVNVVQELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ +    +
Sbjct: 241 EINSKAVTTSDQMLQTVTQ 259


>gi|83721615|ref|YP_440803.1| flagellar basal body rod protein FlgG [Burkholderia thailandensis
           E264]
 gi|167579490|ref|ZP_02372364.1| flagellar basal body rod protein FlgG [Burkholderia thailandensis
           TXDOH]
 gi|167617587|ref|ZP_02386218.1| flagellar basal body rod protein FlgG [Burkholderia thailandensis
           Bt4]
 gi|257140546|ref|ZP_05588808.1| flagellar basal body rod protein FlgG [Burkholderia thailandensis
           E264]
 gi|83655440|gb|ABC39503.1| flagellar basal-body rod protein FlgG [Burkholderia thailandensis
           E264]
          Length = 262

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 47/259 (18%), Positives = 90/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A + ++  +++N++N  T GF+  +  F +++               
Sbjct: 1   MNRSLYIAATGMNAQQAQMDVISNNLANVSTNGFKGSRAVFEDLLYQTVRQPGANSTQQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           GS   TG   D A+ G  +F +  P G    TRDG F
Sbjct: 61  ELPSGLQLGTGVQQVATERLYTQGSLTQTGNSKDVAINGQGFFQVLMPDGTNAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQKGKVIATMGLYSVDM 165
           +    G LV++SG   +  +               V    +  S     I  + + +   
Sbjct: 121 QTNAQGQLVTSSGYQVIPAITIPQNATSLTIGSDGVVSVTQPGSNNAVQIGALQIATFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   R  +  +                   T+K+G++E SN N + E+  MI   + +
Sbjct: 181 PAGLDARGENLFAETTSSGAPNVSQPGLNGAGTLKQGYVEASNVNVVQELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ +    +
Sbjct: 241 EINSKAVTTSDQMLQTVTQ 259


>gi|28869144|ref|NP_791763.1| flagellar basal-body rod protein FlgG [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|71735047|ref|YP_275559.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|213967579|ref|ZP_03395727.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           tomato T1]
 gi|257484944|ref|ZP_05638985.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           tabaci ATCC 11528]
 gi|289627766|ref|ZP_06460720.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|289651643|ref|ZP_06482986.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           aesculi str. 2250]
 gi|298487853|ref|ZP_07005893.1| Flagellar basal-body rod protein flgG [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|301385716|ref|ZP_07234134.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           tomato Max13]
 gi|302060071|ref|ZP_07251612.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           tomato K40]
 gi|302134830|ref|ZP_07260820.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           tomato NCPPB 1108]
 gi|302185580|ref|ZP_07262253.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           syringae 642]
 gi|28852384|gb|AAO55458.1| flagellar basal-body rod protein FlgG [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|71555600|gb|AAZ34811.1| flagellar basal-body rod protein FlgG [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|213927880|gb|EEB61427.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           tomato T1]
 gi|298157578|gb|EFH98658.1| Flagellar basal-body rod protein flgG [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|320325096|gb|EFW81165.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           glycinea str. B076]
 gi|320329355|gb|EFW85348.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330866425|gb|EGH01134.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           aesculi str. 0893_23]
 gi|330880529|gb|EGH14678.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330986471|gb|EGH84574.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           lachrymans str. M301315]
 gi|331011045|gb|EGH91101.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           tabaci ATCC 11528]
 gi|331017022|gb|EGH97078.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 262

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 44/262 (16%), Positives = 97/262 (37%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  +      A +  L+T+++N++N  T GF++ + +F +++  IK           
Sbjct: 1   MLPALYVAKTGLAAQDTNLTTISNNLANVSTTGFKSDRAEFQDLLYQIKRQPGAQSTQDS 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V       +   GS  +T   LD A+ G  +F +  P G    +RDG F
Sbjct: 61  ELPSGLQLGTGVRIVGTQKNFTAGSLQTTNNPLDLAVNGRGFFQVTQPDGTVAYSRDGTF 120

Query: 107 KVTDDGSLVSASGK--YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
            +  +G +V+A+G    P + +           +          +   ++I  +      
Sbjct: 121 HLDANGQIVTANGYALEPAIVVPQNAQTFTVGQDGTVSVTLAGATATPQIIGNIQTADFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +           +  +          +  LE+SN +++ E+  MI   + 
Sbjct: 181 NPAGLQAIGGNLYLETGSSGAPQIGTPGLNGLGPTLQNTLENSNVSTVEELVNMITTQRA 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   ++ +    +N+
Sbjct: 241 YEMNSKVISTADQMLQNLTQNL 262


>gi|309779449|ref|ZP_07674210.1| flagellar basal-body rod protein FlgG [Ralstonia sp. 5_7_47FAA]
 gi|308921690|gb|EFP67326.1| flagellar basal-body rod protein FlgG [Ralstonia sp. 5_7_47FAA]
          Length = 260

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 92/259 (35%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A + +L  +++N++N +T GF+  +  F +++     +         
Sbjct: 1   MIRSLWISKTGMDAQQSQLDVISNNLANVNTTGFKRSRAVFEDLLYQNVREPGAQSSQQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  +             G+   TG   D A+ G+ +F ++ P G    TRDG F
Sbjct: 61  TLPSGMQIGTGTRIVATERLHTQGNLQQTGNSTDVAINGNGFFQVQMPDGTLAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           ++   G LV++SG      +            +   V      +     + T  L +   
Sbjct: 121 QINAQGQLVTSSGYPVQPAVTVPQNATSLTIGKDGVVTVTTPGTVNNTQVGTFQLANFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +  +           +  +     + + ++E SN N + EM  MI   + +
Sbjct: 181 PAGLRSMGENLYAETEASGTANLANPGSNGVGALNQNYVETSNVNVVEEMVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ + +  +
Sbjct: 241 EINSKSVQTSDQMLEKLSQ 259


>gi|218249387|ref|YP_002375274.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           ZS7]
 gi|221217927|ref|ZP_03589394.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           72a]
 gi|224533400|ref|ZP_03673994.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           CA-11.2a]
 gi|225549985|ref|ZP_03770946.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           118a]
 gi|218164575|gb|ACK74636.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           ZS7]
 gi|221192233|gb|EEE18453.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           72a]
 gi|224513565|gb|EEF83922.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           CA-11.2a]
 gi|225369444|gb|EEG98896.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           118a]
          Length = 282

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 49/280 (17%), Positives = 105/280 (37%), Gaps = 38/280 (13%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51
           M        +  +A  ++L TV++N++N D +G++        F E++    ND      
Sbjct: 1   MVRGIYTAASGMMAERRKLDTVSNNLANIDLIGYKKDLSIQKAFPEMLIRRLNDDGLYKF 60

Query: 52  ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101
                     + +  + V   + Y   E G   +TG  LD AL    +F +++  G   T
Sbjct: 61  PKGHLETAPVVGKIGTGVEENEIYTVFEQGPLKTTGNPLDLALTDQGFFVIQTSDGERYT 120

Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI------------- 148
           R+G F +  +G LV+ SG   + +   + ++                             
Sbjct: 121 RNGSFTIGKEGILVTKSGFPVLGEKGYIYLKKNNFKITHQGQVFHNSNFESDPKRLVSEY 180

Query: 149 ---SQKGKVIATMGLYSVDMSQGFVRRENSGIS---PNIPPTPLEDLSGVTVKRGFLEDS 202
               +  +++ T+ + + +  +   ++ NS       +     ++      ++   LE S
Sbjct: 181 ENSWENYELLDTIRIVNFENPRFLKKQGNSLWIDTKTSGKAQEIDISLRPKIETETLEAS 240

Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           N N++ EM  MI + + + +    I   +  + + I  I 
Sbjct: 241 NVNAVKEMVLMIEINRAYEANQKTIQTEDSLLGKLINEIG 280


>gi|161526184|ref|YP_001581196.1| flagellar basal body rod protein FlgG [Burkholderia multivorans
           ATCC 17616]
 gi|189349100|ref|YP_001944728.1| flagellar basal body rod protein FlgG [Burkholderia multivorans
           ATCC 17616]
 gi|221215573|ref|ZP_03588536.1| flagellar basal-body rod protein FlgG [Burkholderia multivorans
           CGD1]
 gi|160343613|gb|ABX16699.1| flagellar basal-body rod protein FlgG [Burkholderia multivorans
           ATCC 17616]
 gi|189333122|dbj|BAG42192.1| flagellar basal-body rod protein [Burkholderia multivorans ATCC
           17616]
 gi|221164561|gb|EED97044.1| flagellar basal-body rod protein FlgG [Burkholderia multivorans
           CGD1]
          Length = 262

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 90/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A + ++  +++N++N  T GF+  +  F +++               
Sbjct: 1   MNRSLYIAATGMNAQQAQMDVISNNLANVSTNGFKGSRAVFEDLLYQTIRQPGANSTQQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           GS   TG   D A+ G  +F +  P G    TRDG F
Sbjct: 61  ELPSGLQLGTGVQQVATERLYTQGSLTQTGNSKDVAINGAGFFQVLMPDGTNAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +    G LV++SG   +  +            +   V      S     I ++ + +   
Sbjct: 121 QTNAQGQLVTSSGYQILPAITVPQNATSLTIGKDGVVSVTQPGSSNAVQIGSLQIATFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   +  +  +                   T+ +G++E SN N + E+  MI   + +
Sbjct: 181 PAGLEAKGENLFAETTSSGAPNVSQPGLNGAGTLNQGYVEASNVNVVQELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ +    +
Sbjct: 241 EINSKAVTTSDQMLQTVTQ 259


>gi|227820852|ref|YP_002824822.1| flagellar basal body rod protein FlgF [Sinorhizobium fredii NGR234]
 gi|227339851|gb|ACP24069.1| Flagellar basal-body rod protein FlgF [Sinorhizobium fredii NGR234]
          Length = 241

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 109/242 (45%), Positives = 161/242 (66%), Gaps = 4/242 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           MQT   + L++Q+ALE+RL+T+ADN++N +TVGFR+ +VKF +V+G  K     K+S+V+
Sbjct: 1   MQTGLYVALSSQMALEKRLNTLADNIANANTVGFRSTEVKFDQVLGDTK---PSKVSYVS 57

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
            G+EYL+   G+   TG+ LDFA++G+AWF +++P G  LTRDGRF +T+ G LV+  G 
Sbjct: 58  EGEEYLNTGNGALARTGSALDFAIKGNAWFNIDTPGGPALTRDGRFTLTETGELVTLKGY 117

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
            PVLD    PIQ+        VG  G I Q G  +A +GLY  D S GFVR +NS + P 
Sbjct: 118 -PVLDAGGAPIQLNGGAGEITVGADGAIHQNGVQVALLGLYEADFSSGFVRYDNSAVMPA 176

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
             P P+ D   V V +GFLE+SN N++ EM Q+I +T+ F+++T L+ ++E S+ EAI+ 
Sbjct: 177 AQPEPVVDRFDVGVMQGFLEESNVNAVQEMTQLIMVTRAFDNVTALMRDSEGSLEEAIKT 236

Query: 241 IA 242
           + 
Sbjct: 237 LG 238


>gi|188592119|ref|YP_001796717.1| flagellar basal body rod protein flgg [Cupriavidus taiwanensis LMG
           19424]
 gi|170938493|emb|CAP63480.1| FlgG: Flagellar basal-body rod protein [Cupriavidus taiwanensis LMG
           19424]
          Length = 261

 Score =  167 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 86/259 (33%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A + ++  +++N++N  T GF+  +  F E++               
Sbjct: 1   MIRSLWIAKTGLDAQQTQMDVISNNLANVSTNGFKRGRAVFEELMYQTIRQPGALSSDQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+   TG   D A+ G  +F +  P      TRDG F
Sbjct: 61  TLPSGMQLGTGVRPVATERIHTQGNPQQTGNAKDVAILGQGFFQVALPDGTTAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V  +G LV++SG      +      +         V      S     +  + L +   
Sbjct: 121 QVDQNGQLVTSSGFVIQPAITIPANTLSMTIGRDGTVSVTQPGSSANVQVGQLQLATFMN 180

Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +                       V++ ++E SN N + E+  MI   + +
Sbjct: 181 PAGLESMGENLYVQTDASGAPNTTVPGLNGAGVVQQNYVEASNVNVVEELVSMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ +    +
Sbjct: 241 EINSKAVQASDQMLQRLAQ 259


>gi|308050370|ref|YP_003913936.1| flagellar basal-body rod protein FlgG [Ferrimonas balearica DSM
           9799]
 gi|307632560|gb|ADN76862.1| flagellar basal-body rod protein FlgG [Ferrimonas balearica DSM
           9799]
          Length = 262

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 44/262 (16%), Positives = 96/262 (36%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           MQ +  I      A +  ++T+++N++N  TVG++  +  F +++    N          
Sbjct: 1   MQPALWISKTGLDAQQTDIATISNNLANASTVGYKKSRAIFEDLLYQTINQAGGISSQNT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    +             G+ ++T   LD  +EG  +F ++ P   I  +R+G+F
Sbjct: 61  ELPAGLTLGAGTKVAATQRIFSQGNMLTTDNSLDLMIEGPGFFEIQLPDGTIAYSRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE--KGEISQKGKVIATMGLYSVD 164
            + D+G LV+    + +     VP                +   + + +VI  + + +  
Sbjct: 121 ALDDEGQLVTPGAGFLLNPGIQVPEDAQSITVSGEGEVSVRVPGAAENQVIGQIEIANFV 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +                      T+++G LE SN N   E+  MI   + 
Sbjct: 181 NPTGLEPIGQNMFLETGASGAPIQGVPGLDGLGTLRQGALETSNVNVTEELVNMIESQRI 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   ++ +    + +
Sbjct: 241 YEMNSKVISTVDQMLANLNQQL 262


>gi|53717916|ref|YP_106902.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei
           K96243]
 gi|53724567|ref|YP_104800.1| flagellar basal body rod protein FlgG [Burkholderia mallei ATCC
           23344]
 gi|67641540|ref|ZP_00440317.1| flagellar basal-body rod protein FlgG [Burkholderia mallei GB8
           horse 4]
 gi|76808723|ref|YP_331881.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei
           1710b]
 gi|121598854|ref|YP_994293.1| flagellar basal body rod protein FlgG [Burkholderia mallei SAVP1]
 gi|124386502|ref|YP_001028058.1| flagellar basal body rod protein FlgG [Burkholderia mallei NCTC
           10229]
 gi|126439033|ref|YP_001057324.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei
           668]
 gi|126450732|ref|YP_001082865.1| flagellar basal body rod protein FlgG [Burkholderia mallei NCTC
           10247]
 gi|126454438|ref|YP_001064566.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei
           1106a]
 gi|134283616|ref|ZP_01770315.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           305]
 gi|167001539|ref|ZP_02267334.1| flagellar basal-body rod protein FlgG [Burkholderia mallei PRL-20]
 gi|167717662|ref|ZP_02400898.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei
           DM98]
 gi|167736705|ref|ZP_02409479.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei
           14]
 gi|167813804|ref|ZP_02445484.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei
           91]
 gi|167822320|ref|ZP_02453791.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei 9]
 gi|167843910|ref|ZP_02469418.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei
           B7210]
 gi|167892412|ref|ZP_02479814.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei
           7894]
 gi|167900910|ref|ZP_02488115.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei
           NCTC 13177]
 gi|167917166|ref|ZP_02504257.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei
           BCC215]
 gi|217425015|ref|ZP_03456511.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           576]
 gi|226199816|ref|ZP_03795367.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           Pakistan 9]
 gi|237810463|ref|YP_002894914.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           MSHR346]
 gi|242317698|ref|ZP_04816714.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           1106b]
 gi|254175110|ref|ZP_04881771.1| flagellar basal-body rod protein FlgG [Burkholderia mallei ATCC
           10399]
 gi|254182138|ref|ZP_04888735.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           1655]
 gi|254196575|ref|ZP_04902999.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           S13]
 gi|254201898|ref|ZP_04908262.1| flagellar basal-body rod protein FlgG [Burkholderia mallei FMH]
 gi|254207232|ref|ZP_04913583.1| flagellar basal-body rod protein FlgG [Burkholderia mallei JHU]
 gi|254261052|ref|ZP_04952106.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           1710a]
 gi|254295816|ref|ZP_04963273.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           406e]
 gi|254359734|ref|ZP_04976005.1| flagellar basal-body rod protein FlgG [Burkholderia mallei
           2002721280]
 gi|52208330|emb|CAH34263.1| flagellar basal-body rod protein [Burkholderia pseudomallei K96243]
 gi|52427990|gb|AAU48583.1| flagellar basal-body rod protein FlgG [Burkholderia mallei ATCC
           23344]
 gi|76578176|gb|ABA47651.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           1710b]
 gi|121227664|gb|ABM50182.1| flagellar basal-body rod protein FlgG [Burkholderia mallei SAVP1]
 gi|124294522|gb|ABN03791.1| flagellar basal-body rod protein FlgG [Burkholderia mallei NCTC
           10229]
 gi|126218526|gb|ABN82032.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           668]
 gi|126228080|gb|ABN91620.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           1106a]
 gi|126243602|gb|ABO06695.1| flagellar basal-body rod protein FlgG [Burkholderia mallei NCTC
           10247]
 gi|134245025|gb|EBA45120.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           305]
 gi|147747792|gb|EDK54868.1| flagellar basal-body rod protein FlgG [Burkholderia mallei FMH]
 gi|147752774|gb|EDK59840.1| flagellar basal-body rod protein FlgG [Burkholderia mallei JHU]
 gi|148028948|gb|EDK86880.1| flagellar basal-body rod protein FlgG [Burkholderia mallei
           2002721280]
 gi|157806194|gb|EDO83364.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           406e]
 gi|160696155|gb|EDP86125.1| flagellar basal-body rod protein FlgG [Burkholderia mallei ATCC
           10399]
 gi|169653318|gb|EDS86011.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           S13]
 gi|184212676|gb|EDU09719.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           1655]
 gi|217392035|gb|EEC32061.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           576]
 gi|225928167|gb|EEH24203.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           Pakistan 9]
 gi|237504504|gb|ACQ96822.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           MSHR346]
 gi|238522491|gb|EEP85935.1| flagellar basal-body rod protein FlgG [Burkholderia mallei GB8
           horse 4]
 gi|242140937|gb|EES27339.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           1106b]
 gi|243062740|gb|EES44926.1| flagellar basal-body rod protein FlgG [Burkholderia mallei PRL-20]
 gi|254219741|gb|EET09125.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           1710a]
          Length = 262

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 90/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A + ++  +++N++N  T GF+  +  F +++               
Sbjct: 1   MNRSLYIAATGMNAQQAQMDVISNNLANVSTNGFKGSRAVFEDLLYQTVRQPGANSTQQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           GS   TG   D A+ G  +F +  P G    TRDG F
Sbjct: 61  ELPSGLQLGTGVQQVATERLYTQGSLQQTGNSKDVAINGQGFFQVLMPDGTNAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQKGKVIATMGLYSVDM 165
           +    G LV++SG   +  +               V    +  S     I  + + +   
Sbjct: 121 QTNAQGQLVTSSGYQVIPAITIPQNANSLTIGSDGVVSVTQPGSNNAVQIGALQIATFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   +  +  +                   T+K+G++E SN N + E+  MI   + +
Sbjct: 181 PAGLDAKGENLFAETTSSGAPNVSQPGLNGAGTLKQGYVESSNVNVVQELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ +    +
Sbjct: 241 EINSKAVTTSDQMLQTVTQ 259


>gi|237752808|ref|ZP_04583288.1| flagellar basal-body rod protein distal rod protein [Helicobacter
           winghamensis ATCC BAA-430]
 gi|229376297|gb|EEO26388.1| flagellar basal-body rod protein distal rod protein [Helicobacter
           winghamensis ATCC BAA-430]
          Length = 263

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 48/262 (18%), Positives = 99/262 (37%), Gaps = 23/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +        L  + ++   ++N+SN +T G+R  + +F+++   +            
Sbjct: 1   MMRALYTATTGMLGQQLQIDVTSNNISNVNTFGYRKERAEFADLFHQVLQYAGSSTSETT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                      V           G+F  T   LD A+ G+ +F +E P   I  TRDG F
Sbjct: 61  LSPTGIEVGLGVRPTAVQKIFSQGNFKETEQNLDVAITGNGFFQIELPDGTIAYTRDGSF 120

Query: 107 KVTDDGSLVSASGK--YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
           K  D+G++V+A G    P + +     QI    +      +G  ++  + +  +   +  
Sbjct: 121 KRDDEGNVVNAQGYLLVPNITIPDDATQINIGKDGTVTVVQGNETEVNQ-LGQIETVNFI 179

Query: 165 MSQGFVRRENSGI-SPNIPPTP----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G     ++   + N    P            + +GF+E SN   + EM  +I   + 
Sbjct: 180 NPAGLHALGDNLYLNTNASGDPIVGTPGLNGFGQLAQGFVETSNVKLVEEMTDLIVGQRA 239

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           + + +  I   +  + + +  +
Sbjct: 240 YEANSKSIQTADSML-QIVNQL 260


>gi|294500931|ref|YP_003564631.1| flagellar hook protein FlgE [Bacillus megaterium QM B1551]
 gi|294350868|gb|ADE71197.1| flagellar hook protein FlgE [Bacillus megaterium QM B1551]
          Length = 264

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 48/261 (18%), Positives = 89/261 (34%), Gaps = 22/261 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++     + +L  + +N++N +T G++  +  F ++V               
Sbjct: 1   MLRSMYSGISGMKNFQTKLDVLGNNIANVNTYGYKKGRTTFQDLVSQQVAGATAPGANRG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                Q       G     +  GS  STG  LD A+ GD +F +   +    TR G F +
Sbjct: 61  GVNAKQVGLGSKIGTIDTVQTAGSIQSTGRPLDLAISGDGYFVVNDGKSDYYTRAGNFYL 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQI-----PQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
              G+LV+  G Y                         V              T+ L   
Sbjct: 121 DSSGNLVTGDGLYVQKTGGGNINIPSTSKSYSIGADGKVNIIDANGNITPNTPTIELAKF 180

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQ 218
             ++G  +   +  + ++        +       T+    LE SN +   E   MI   +
Sbjct: 181 ANNEGLEKAGGNLFAKSVNSGNPLVGNPGASGTGTLVSSALEMSNVDLSEEFTDMIVAQR 240

Query: 219 KFNSITTLIDENEKSMLEAIR 239
            F + T +I  +++ + E + 
Sbjct: 241 GFQANTRIITTSDEILQELVN 261


>gi|2275161|gb|AAB81413.1| FlgG [Sinorhizobium meliloti]
          Length = 262

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 44/262 (16%), Positives = 91/262 (34%), Gaps = 21/262 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55
             + +I      A +  L  +A+N++N +T G++  + +FS+++   +            
Sbjct: 1   MKALSIAATGMNAQQLNLEVIANNIANINTTGYKRARAEFSDLLYQTERAQGVPNRSNQA 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                      V +         GS ++TG + D AL G  WF +E+P    + TR G F
Sbjct: 61  IVPEGAIIGLGVQTSAVRNLHIQGSLVNTGNDYDLALVGRGWFQIETPDGETVYTRSGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
                G LV+  G   V  +                V  +     + + I  + + +   
Sbjct: 121 NTNATGQLVTIDGYTVVPGVTVPQDATEIVFTSSGQVMVRIGNDTELQEIGQLTIANFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +                       +K+ +LE SN + + E+  +I   + +
Sbjct: 181 EAGLEPMGENLFRQTPASGDPIVGTPADPGFAQIKQNYLESSNVDPVKEITDLISAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNIA 242
              + +I   ++      +N+ 
Sbjct: 241 EMNSKIIQAADEMAATVSKNLR 262


>gi|15964415|ref|NP_384768.1| flagellar basal body rod protein FlgG [Sinorhizobium meliloti 1021]
 gi|307311557|ref|ZP_07591198.1| flagellar basal-body rod protein FlgG [Sinorhizobium meliloti
           BL225C]
 gi|307318912|ref|ZP_07598343.1| flagellar basal-body rod protein FlgG [Sinorhizobium meliloti AK83]
 gi|17380480|sp|Q52946|FLGG_RHIME RecName: Full=Flagellar basal-body rod protein flgG; AltName:
           Full=Distal rod protein
 gi|15073592|emb|CAC45234.1| Flagellar basal-body rod protein [Sinorhizobium meliloti 1021]
 gi|306895326|gb|EFN26081.1| flagellar basal-body rod protein FlgG [Sinorhizobium meliloti AK83]
 gi|306899574|gb|EFN30203.1| flagellar basal-body rod protein FlgG [Sinorhizobium meliloti
           BL225C]
          Length = 262

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 45/262 (17%), Positives = 91/262 (34%), Gaps = 21/262 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55
             + +I      A +  L  +A+N++N +T G++  + +FS+++   +            
Sbjct: 1   MKALSIAATGMNAQQLNLEVIANNIANINTTGYKRARAEFSDLLYQTERAQGVPNRSNQA 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                      V +         GS ++TG + D AL G  WF +E+P    + TR G F
Sbjct: 61  IVPEGAIIGLGVQTSAVRNLHIQGSLVNTGNDYDLALVGRGWFQIETPDGETVYTRSGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
                G LV+  G   V  +                V  +     + + I  + + +   
Sbjct: 121 NTNATGQLVTIDGYTVVPGVTVPQDATEIVFTSSGQVMVRIGNDTELQEIGQLTIANFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +                       VK+ +LE SN + + E+  +I   + +
Sbjct: 181 EAGLEPMGENLFRQTPASGDPIVGTPADPGFAQVKQNYLESSNVDPVKEITDLISAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNIA 242
              + +I   ++      +N+ 
Sbjct: 241 EMNSKIIQAADEMAATVSKNLR 262


>gi|325473455|gb|EGC76650.1| flagellar basal-body rod protein FlgG [Treponema denticola F0402]
          Length = 270

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 55/266 (20%), Positives = 102/266 (38%), Gaps = 26/266 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTI---KVKFSEVVGAIKND------ 51
           M   +    +  LA +++L  +++N++N DT  F+     +  F E++    ND      
Sbjct: 1   MVRGWYTAASGMLAQQRQLDVISNNLANLDTTSFKRDVSVQKSFPELLLRRLNDDGVIKN 60

Query: 52  ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101
                     I +    V + + +   E GS   T +  D ALEG  +FA+E+P G   T
Sbjct: 61  PFGSSDIAPIIGKLGLGVETNEIFTEFEQGSLKQTSSPADLALEGQGFFAVETPYGEKYT 120

Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMA----SVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157
           R+G F V  +G L++  G   + +              +D    V    +       +  
Sbjct: 121 RNGNFMVGVEGYLMTKEGYPVMGENGRIFLQDMEYKINQDGQIYVRPITDPESDSVYLDR 180

Query: 158 MGLYSVDMSQGFVRRENSGISPN---IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMI 214
           + +   +  +   +  +S              E  S   V +GF+E SN N + EM +MI
Sbjct: 181 LKIVEFENDRYLSKNGSSFYLDTPLSGRAIAAEGPSRPVVVQGFIEASNVNVVNEMVRMI 240

Query: 215 HLTQKFNSITTLIDENEKSMLEAIRN 240
            + + + +    I   +  M +    
Sbjct: 241 EVNRAYEANQKSIQAEDTMMAKLWNE 266


>gi|225551767|ref|ZP_03772710.1| flagellar hook-basal body complex protein [Borrelia sp. SV1]
 gi|225371562|gb|EEH00989.1| flagellar hook-basal body complex protein [Borrelia sp. SV1]
          Length = 282

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 49/280 (17%), Positives = 105/280 (37%), Gaps = 38/280 (13%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51
           M        +  +A  ++L TV++N++N D +G++        F E++    ND      
Sbjct: 1   MVRGIYTAASGMMAERRKLDTVSNNLANIDLIGYKKDLSIQKAFPEILIRRLNDDGLYKF 60

Query: 52  ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101
                     + +  + V   + Y   E G   +TG  LD AL    +F +++  G   T
Sbjct: 61  PKGHLETAPVVGKLGTGVEENEIYTVFEQGPLKTTGNPLDLALTDQGFFVIQTSDGERYT 120

Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI------------- 148
           R+G F +  +G LV+ SG   + +   + ++                             
Sbjct: 121 RNGSFTIGKEGILVTKSGFPVLGEKGYIYLKKNNFKITPQGQIFHNSNFESDPKRLVSEY 180

Query: 149 ---SQKGKVIATMGLYSVDMSQGFVRRENSGIS---PNIPPTPLEDLSGVTVKRGFLEDS 202
               +  +++ T+ + + +  +   ++ NS       +     ++      ++   LE S
Sbjct: 181 ENSWENYELLDTIRIVNFENPRFLKKQGNSLWIDTKTSGKAQEIDVSLRPKIETETLEAS 240

Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           N N++ EM  MI + + + +    I   +  + + I  I 
Sbjct: 241 NVNAVKEMVLMIEINRAYEANQKTIQTEDSLLGKLINEIG 280


>gi|224532954|ref|ZP_03673563.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           WI91-23]
 gi|224512118|gb|EEF82510.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           WI91-23]
          Length = 282

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 49/280 (17%), Positives = 105/280 (37%), Gaps = 38/280 (13%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51
           M        +  +A  ++L TV++N++N D +G++        F E++    ND      
Sbjct: 1   MVRGIYTAASGMMAERRKLDTVSNNLANIDLIGYKKDLSIQKAFPEMLIRRLNDDGLYKF 60

Query: 52  ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101
                     + +  + V   + Y   E G   +TG  LD AL    +F +++  G   T
Sbjct: 61  PKGHLETAPIVGKIGTGVEENEIYTVFEQGPLKTTGNPLDLALTDQGFFVIQTSDGERYT 120

Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI------------- 148
           R+G F +  +G LV+ SG   + +   + ++                             
Sbjct: 121 RNGSFTIGKEGILVTKSGFPVLGEKGYIYLKKNNFKITPQGQVFHNSNFESDPKRLVSEY 180

Query: 149 ---SQKGKVIATMGLYSVDMSQGFVRRENSGIS---PNIPPTPLEDLSGVTVKRGFLEDS 202
               +  +++ T+ + + +  +   ++ NS       +     ++      ++   LE S
Sbjct: 181 ENSWENYELLDTIRIVNFENPRFLKKQGNSLWIDTKTSGKAQEIDISLRPKIETETLEAS 240

Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           N N++ EM  MI + + + +    I   +  + + I  I 
Sbjct: 241 NVNAVKEMVLMIEINRAYEANQKTIQTEDSLLGKLINEIG 280


>gi|195941596|ref|ZP_03086978.1| flagellar hook-basal body complex protein (flhO) [Borrelia
           burgdorferi 80a]
 gi|216264480|ref|ZP_03436472.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           156a]
 gi|226320635|ref|ZP_03796194.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           29805]
 gi|215980953|gb|EEC21760.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           156a]
 gi|226233958|gb|EEH32680.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           29805]
 gi|312148084|gb|ADQ30743.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           JD1]
 gi|312149492|gb|ADQ29563.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           N40]
          Length = 282

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 49/280 (17%), Positives = 105/280 (37%), Gaps = 38/280 (13%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51
           M        +  +A  ++L TV++N++N D +G++        F E++    ND      
Sbjct: 1   MVRGIYTAASGMMAERRKLDTVSNNLANIDLIGYKKDLSIQKAFPEMLIRRLNDDGLYKF 60

Query: 52  ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101
                     + +  + V   + Y   E G   +TG  LD AL    +F +++  G   T
Sbjct: 61  PKGHLETAPVVGKIGTGVEENEIYTVFEQGPLKTTGNPLDLALTDQGFFVIQTSDGERYT 120

Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI------------- 148
           R+G F +  +G LV+ SG   + +   + ++                             
Sbjct: 121 RNGSFTIGKEGILVTKSGFPVLGEKGYIYLKKNNFKITPQGQVFHNSNFESDPKRLVSEY 180

Query: 149 ---SQKGKVIATMGLYSVDMSQGFVRRENSGIS---PNIPPTPLEDLSGVTVKRGFLEDS 202
               +  +++ T+ + + +  +   ++ NS       +     ++      ++   LE S
Sbjct: 181 ENSWENYELLDTIRIVNFENPRFLKKQGNSLWIDTKTSGKAQEIDISLRPKIETETLEAS 240

Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           N N++ EM  MI + + + +    I   +  + + I  I 
Sbjct: 241 NVNAVKEMVLMIEINRAYEANQKTIQTEDSLLGKLINEIG 280


>gi|149189838|ref|ZP_01868118.1| putative flagellar basal-body rod protein [Vibrio shilonii AK1]
 gi|148836324|gb|EDL53281.1| putative flagellar basal-body rod protein [Vibrio shilonii AK1]
          Length = 261

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 46/261 (17%), Positives = 97/261 (37%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M ++  +      A + +++ +++N++N +TVGF+  +V F ++  +I+           
Sbjct: 1   MHSALWVSKTGMAAQDTKMTAISNNLANVNTVGFKRDRVVFEDLFYSIQRQPGAQVDQVN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106
                 Q  S V           GS  +TG +LD A+ G  +F +E+    I+ TR+G+F
Sbjct: 61  QLPTGVQLGSGVRVVGTQKVFTQGSAQNTGQDLDLAVMGQGFFQIENSDGQIMYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-IATMGLYSVDM 165
            V  +G +V++ G      +      +     +                +  + L     
Sbjct: 121 HVNSEGLMVNSQGLPLEPQIQIPDNALTLSVGVDGTVTATTADGPAPQDLGQITLAKFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +           E     +    ++K+G LE SN   + EM  MI   + +
Sbjct: 181 PAGLEAIGGNLFKETEASGQAEELIAGEEGAGSIKQGALEGSNVQVVEEMVDMITTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
                ++   +  +    + +
Sbjct: 241 EMNAKVVSAADDMLKFVAQAV 261


>gi|126176154|ref|YP_001052303.1| flagellar basal-body rod protein FlgG [Shewanella baltica OS155]
 gi|304412506|ref|ZP_07394112.1| flagellar basal-body rod protein FlgG [Shewanella baltica OS183]
 gi|307307165|ref|ZP_07586903.1| flagellar basal-body rod protein FlgG [Shewanella baltica BA175]
 gi|125999359|gb|ABN63434.1| flagellar basal-body rod protein FlgG [Shewanella baltica OS155]
 gi|304349148|gb|EFM13560.1| flagellar basal-body rod protein FlgG [Shewanella baltica OS183]
 gi|306910404|gb|EFN40835.1| flagellar basal-body rod protein FlgG [Shewanella baltica BA175]
          Length = 261

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 45/261 (17%), Positives = 105/261 (40%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           MQ++  +      A + +++ +A+N++N +T GF+  +V F+++   ++           
Sbjct: 1   MQSALWVSKTGLTAQDTKMTAIANNLANVNTTGFKRDRVAFNDLFYQVQRQPGGQVDALN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  +             G   +T  +LD A+EG  +F +E P   +  TRDG+F
Sbjct: 61  NLPSGLQLGAGTRVVGTQKIFTTGDMQNTSQQLDLAIEGHGFFQVEEPNGDLAYTRDGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
             + +G +V++ G   V ++      +         V  K     + + +  + L +   
Sbjct: 121 YRSSEGMMVTSQGLPLVPNIVIPEDALTVTIANDGVVTAKMAGEAEPQDLGQITLVNFTN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   R ++            +      +   +++G LE +N N + EM +MI   + +
Sbjct: 181 PAGLEARGDNLYRETAASGVAVEGVAGDQALGALRQGALEGANVNVVEEMVEMISTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
                ++  ++  +    +++
Sbjct: 241 EMNAKVVSASDDMLKFLNQSV 261


>gi|293605005|ref|ZP_06687401.1| flagellar basal-body rod protein FlgG [Achromobacter piechaudii
           ATCC 43553]
 gi|292816610|gb|EFF75695.1| flagellar basal-body rod protein FlgG [Achromobacter piechaudii
           ATCC 43553]
          Length = 261

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 40/260 (15%), Positives = 88/260 (33%), Gaps = 21/260 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I        +  +  +++N++N  T GF+  +  F +++               
Sbjct: 1   MMRSLWIAKTGLEGQQTSMDVISNNLANVSTNGFKRGRAVFQDLMYQTLRQPGAQVGDAT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                 Q  +             G+  +TG E+D A+ G  +  +E P G    TRDG  
Sbjct: 61  QLPSGLQLGTGARVAATERIHTAGNLNNTGGEMDIAINGRGFLQVELPDGTQGYTRDGAL 120

Query: 107 KVTDDGSLVSASGK--YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
           +   +G L + SG    P +++    + I    +      +   +     I  + + +  
Sbjct: 121 QRDQNGQLTTVSGYVIQPPMNVPDNALSISIGKDGIVSVTQPGAAGVNVQIGQLQIATFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +         P            ++ + ++E SN N   E+  MI   + 
Sbjct: 181 NPTGLQSIGENLYLETDASGPANLLQPGVDGAGSIMQNYVETSNVNVAEELVNMITTQRA 240

Query: 220 FNSITTLIDENEKSMLEAIR 239
           +   +  +  +++ +    +
Sbjct: 241 YEMNSKAVKTSDEMLARLTQ 260


>gi|149201611|ref|ZP_01878585.1| Flagellar distal rod protein [Roseovarius sp. TM1035]
 gi|149144659|gb|EDM32688.1| Flagellar distal rod protein [Roseovarius sp. TM1035]
          Length = 262

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 91/259 (35%), Gaps = 20/259 (7%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID--------- 53
              ++      A + R+  +++N++N +T GF+  +  F  ++                 
Sbjct: 4   NVMHVAKTGLNAQQARIQVISNNLANVNTTGFKRDRANFETLLYQTLRPAGAQTSEATEQ 63

Query: 54  ----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKV 108
                  + V           GS  +T   LD A++G  +F +  P   I  TR+G F  
Sbjct: 64  TAPTTLGTGVRLVSTEKMYTQGSLTTTDNALDLAIDGKGFFQVLMPDGRIGYTRNGTFSQ 123

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
             DG L ++SG     ++   P            +      + + + +  + L      +
Sbjct: 124 NADGVLTTSSGYVVQPEIQIPPEATSISISRDGIISVTLPDAVEAEEVGQLTLAQFANPR 183

Query: 168 GFVRRENSGISPNIPPTPLEDLS-----GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222
           G      + +  +         +        + +G LE SN N + E+ +MI   + +  
Sbjct: 184 GLEPVGETFVVESTASGAPVVGNPLEDGMGDLVQGALETSNVNVVQELVEMIEAQRAYEI 243

Query: 223 ITTLIDENEKSMLEAIRNI 241
            +  I  +++ M     N+
Sbjct: 244 NSRSISASDEMMSYLANNL 262


>gi|167835113|ref|ZP_02461996.1| flagellar basal body rod protein FlgG [Burkholderia thailandensis
           MSMB43]
          Length = 262

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 90/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A + ++  +++N++N  T GF+  +  F +++               
Sbjct: 1   MNRSLYIAATGMNAQQAQMDVISNNLANVSTNGFKGSRAVFEDLLYQTVRQPGANSTQQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           GS   TG   D A+ G  +F +  P G    TRDG F
Sbjct: 61  ELPSGLQLGTGVQQVATERLYTQGSLQQTGNSKDVAINGQGFFQVLMPDGTNAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQKGKVIATMGLYSVDM 165
           +    G LV++SG   +  +               V    +  S     I  + + +   
Sbjct: 121 QTNAQGQLVTSSGYQVIPAITMPQNATSLTIGSDGVVSVTQPGSNNAVQIGALQIATFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   +  +  +                   T+K+G++E SN N + E+  MI   + +
Sbjct: 181 PAGLDAKGENLFAETTSSGAPNVSQPGLNGAGTLKQGYVESSNVNVVQELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ +    +
Sbjct: 241 EINSKAVTTSDQMLQTVTQ 259


>gi|296283228|ref|ZP_06861226.1| flagellar basal body rod protein FlgG [Citromicrobium bathyomarinum
           JL354]
          Length = 261

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 47/259 (18%), Positives = 103/259 (39%), Gaps = 21/259 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             S +I     LA +  +  +++N++N +T GF+  + +F +++    +           
Sbjct: 1   MRSLSIAGTGMLAQQTNVDVISNNIANMNTTGFKRQRAQFQDLLYQQVSRPGASSAGPEA 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                 Q  + V +G  Y   E G+ + T    D A++G  +F ++ P G I  TRDG F
Sbjct: 61  RAPTGIQIGAGVRTGGVYRIAEQGALVQTDNRFDLAIQGLGYFQVQMPTGEIGYTRDGTF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +++D G LV++ G      +      +         V  K     + + +  + L +   
Sbjct: 121 QLSDQGELVTSQGLVVEPGITIPQGAVDVAVSRTGEVQIKIAGETEMQTVGQIELATFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   + ++              +       +V +GF+E SN N + E+  +I   + +
Sbjct: 181 EAGLEAKGDNLFLATAASGEPTIAAPGEPGFGSVAQGFVEASNVNPVAEITALITAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              + ++   ++ +    +
Sbjct: 241 EMNSRVVKTADEMLGTTSQ 259


>gi|194432508|ref|ZP_03064795.1| flagellar basal-body rod protein FlgG [Shigella dysenteriae 1012]
 gi|194419395|gb|EDX35477.1| flagellar basal-body rod protein FlgG [Shigella dysenteriae 1012]
 gi|332092914|gb|EGI97982.1| flagellar basal-body rod protein FlgG [Shigella dysenteriae 155-74]
          Length = 260

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 88/259 (33%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M +S  I      A +  +  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  +   S         G+   T    D A++G  +F +  P      TRDG F
Sbjct: 61  TLPSGLQIGTGGRSVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGSSAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V  +G LV+A G      +      +         V    +       +  + L +   
Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANALSISIGRDGVVSVTQQGQAAPVQVGQLNLTTFMN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +  +         + +        + +G++E SN N   E+  MI + + +
Sbjct: 181 DTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +   ++ + +  +
Sbjct: 241 EINSKAVSTTDQMLQKLTQ 259


>gi|330502736|ref|YP_004379605.1| flagellar basal body rod protein FlgG [Pseudomonas mendocina NK-01]
 gi|328917022|gb|AEB57853.1| flagellar basal body rod protein FlgG [Pseudomonas mendocina NK-01]
          Length = 261

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 49/261 (18%), Positives = 99/261 (37%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  +      A +  L+T+++N++N  T GF+  + +F +++  I+           
Sbjct: 1   MLPALWVSKTGLSAQDMNLTTISNNLANVATTGFKRDRAEFEDLLYQIRRQPGGQTSQDS 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                 Q  + V           GS  +T   LD A+ G  +F +  P G +  TRDG F
Sbjct: 61  ELPSGLQLGTGVRVVGTQKIFTAGSLQTTEQPLDLAVNGRGFFQILQPDGTVSYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASV-PIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
            +  DG +V++ G      +     ++     E   V      + + +VI  + L     
Sbjct: 121 HLNSDGQIVTSQGFALEPAIVLPAEVRTFTVGEDGTVSVTTAGNAQAQVIGNIQLADFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     N+           +  +       T  +  LE+SN + + E+  MI   + +
Sbjct: 181 PAGLEAIGNNLFLETGSSGAPQVGNPGLNGLGTTLQNTLENSNVSVVEELVNMITTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
              + +I   ++ +    +N+
Sbjct: 241 EMNSKVISTADQMLSFVTQNL 261


>gi|311105937|ref|YP_003978790.1| flagellar basal-body rod protein FlgG [Achromobacter xylosoxidans
           A8]
 gi|310760626|gb|ADP16075.1| flagellar basal-body rod protein FlgG [Achromobacter xylosoxidans
           A8]
          Length = 261

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 40/260 (15%), Positives = 90/260 (34%), Gaps = 21/260 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I        +  +  +++N++N  T GF+  +  F +++               
Sbjct: 1   MMRSLWIAKTGLEGQQTSMDVISNNLANVSTNGFKRGRAVFQDLMYQTLRQPGAQVGDAT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  +             G+  +TG+E+D A+ G  +  +E P G    TRDG  
Sbjct: 61  QLPSGLQLGTGARVAATERIHTAGNLNNTGSEMDIAINGRGFLQIELPDGTQAYTRDGAL 120

Query: 107 KVTDDGSLVSASGK--YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
           +   +G L + SG    P +++    + I   ++      +   +     I  + + +  
Sbjct: 121 QRDQNGQLTTVSGYVIQPPMNIPDNALSISIGNDGIVSVTQPGAAGINVQIGQLQIATFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +         P            ++ + ++E SN N   E+  MI   + 
Sbjct: 181 NPTGLQSIGENLYLETDASGPANLLQPGVDGAGSIMQKYVETSNVNVAEELVNMITTQRA 240

Query: 220 FNSITTLIDENEKSMLEAIR 239
           +   +  +  +++ +    +
Sbjct: 241 YEMNSKAVKTSDEMLARLTQ 260


>gi|310659662|ref|YP_003937383.1| flagellar component of cell-distal portion of basal-body rod
           [Clostridium sticklandii DSM 519]
 gi|308826440|emb|CBH22478.1| flagellar component of cell-distal portion of basal-body rod
           [Clostridium sticklandii]
          Length = 266

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 53/265 (20%), Positives = 105/265 (39%), Gaps = 26/265 (9%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             +     +   A +  + T+++N++N +T GF+  K +F +++      +         
Sbjct: 1   MRALWTAASGMRAQQLNMDTISNNLANVNTTGFKKQKTEFKDLLYTSMKSVSNDPELGEP 60

Query: 54  ---QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---RGIILTRDGRFK 107
              Q    V           G+   T    D ALEG  +F +E+P      + TRDG FK
Sbjct: 61  VNLQIGHGVRPVATSRLFTNGNLEKTENPTDVALEGPGFFVVENPTGNPEQLFTRDGNFK 120

Query: 108 VTDDGSLVS--ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK-----VIATMGL 160
            + DG +++   S  Y VL      I++      F++ E G ++ + +      +  + +
Sbjct: 121 FSVDGDVMTLVTSQGYTVLSTDDDVIEVESTMRNFSISEGGMVTAQDEAGEIVELGEIQI 180

Query: 161 YSVDMSQGFVRRENSGISPNI----PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
                 +G     N+  S       P    ++     + +GFLE SN   + EM +MI  
Sbjct: 181 VQFINPEGLQAMGNNFFSLTANSGEPVIEEDESKDTKLYQGFLETSNVQLVDEMVRMIMA 240

Query: 217 TQKFNSITTLIDENEKSMLEAIRNI 241
            + +   +  I   +  M + + ++
Sbjct: 241 QRAYEINSKSIQTADDMM-QTVNSL 264


>gi|57237001|ref|YP_178802.1| flagellar basal body rod protein FlgG [Campylobacter jejuni RM1221]
 gi|86149818|ref|ZP_01068047.1| flagellar basal-body rod protein FlgG [Campylobacter jejuni subsp.
           jejuni CF93-6]
 gi|86153387|ref|ZP_01071591.1| flagellar basal-body rod protein FlgG [Campylobacter jejuni subsp.
           jejuni HB93-13]
 gi|88597119|ref|ZP_01100355.1| flagellar basal-body rod protein FlgG [Campylobacter jejuni subsp.
           jejuni 84-25]
 gi|121613571|ref|YP_001000394.1| flagellar basal body rod protein FlgG [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|148926663|ref|ZP_01810344.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni CG8486]
 gi|157414985|ref|YP_001482241.1| flagellar basal body rod protein FlgG [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|167005337|ref|ZP_02271095.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|205355540|ref|ZP_03222311.1| flagellar basaL body rod protein [Campylobacter jejuni subsp.
           jejuni CG8421]
 gi|218562337|ref|YP_002344116.1| flagellar basal body rod protein FlgG [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|283956107|ref|ZP_06373594.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni 1336]
 gi|57165805|gb|AAW34584.1| flagellar basal-body rod protein FlgG [Campylobacter jejuni RM1221]
 gi|85839636|gb|EAQ56896.1| flagellar basal-body rod protein FlgG [Campylobacter jejuni subsp.
           jejuni CF93-6]
 gi|85843113|gb|EAQ60324.1| flagellar basal-body rod protein FlgG [Campylobacter jejuni subsp.
           jejuni HB93-13]
 gi|87249438|gb|EAQ72398.1| flagellar basal-body rod protein FlgG [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|88190808|gb|EAQ94781.1| flagellar basal-body rod protein FlgG [Campylobacter jejuni subsp.
           jejuni 84-25]
 gi|112360043|emb|CAL34835.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|145845182|gb|EDK22277.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni CG8486]
 gi|157385949|gb|ABV52264.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|205346774|gb|EDZ33406.1| flagellar basaL body rod protein [Campylobacter jejuni subsp.
           jejuni CG8421]
 gi|283792427|gb|EFC31209.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni 1336]
 gi|284925954|gb|ADC28306.1| flagellar basal-body rod protein FlgG [Campylobacter jejuni subsp.
           jejuni IA3902]
 gi|307747622|gb|ADN90892.1| Flagellar basal-body rod protein FlgG [Campylobacter jejuni subsp.
           jejuni M1]
 gi|315058161|gb|ADT72490.1| Flagellar basal-body rod protein flgG [Campylobacter jejuni subsp.
           jejuni S3]
 gi|315926812|gb|EFV06186.1| flagellar basal-body rod protein FlgG [Campylobacter jejuni subsp.
           jejuni DFVF1099]
 gi|315931897|gb|EFV10852.1| flagellar basal-body rod protein FlgG [Campylobacter jejuni subsp.
           jejuni 327]
          Length = 263

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 40/262 (15%), Positives = 96/262 (36%), Gaps = 22/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S +      +A + ++   ++N++N +T GF+  + +F++++  +            
Sbjct: 1   MMRSLHTAATGMVAQQTQIDVTSNNIANVNTAGFKKSRAEFADLMYQVMKYAGTSTSATT 60

Query: 56  ---------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGR 105
                    +    +    +  E     ++   LD A+ G+ +F ++ P G I  TR+G+
Sbjct: 61  LSPSGIEVGVGVRPTAVTKVFTEGNLKSTSTDGLDMAIAGNGFFQIQLPDGTIGYTRNGQ 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVD 164
           F   ++G++V++ G   + +M                        Q+   I  + L    
Sbjct: 121 FTKDNEGNIVNSDGYRLLPEMTIPEGATAINVATDGTVSVMLPGEQQETQIGQVELVQFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G     ++                      T++ GF+E SN   + EM  +I   + 
Sbjct: 181 NPAGLHSMGDNLYLETGASGAPVAGIAGQDGLGTIRHGFIELSNVQLVEEMTDLITGQRA 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           + + +  I  ++  +   +  +
Sbjct: 241 YEAGSKAITTSDDMLG-IVNQL 261


>gi|260222470|emb|CBA32066.1| Flagellar basal-body rod protein flgG [Curvibacter putative
           symbiont of Hydra magnipapillata]
          Length = 260

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 47/257 (18%), Positives = 95/257 (36%), Gaps = 20/257 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A + +L  +++N++N  T GF+     F +++      +        
Sbjct: 1   MINSLWISKTGMEAQQMQLDVISNNLANVSTNGFKKSHAVFEDLMYQNLRQVGSNTSEQS 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                 Q    V +     S   G+   +   LD A++G+ +F +  P G    TRDG F
Sbjct: 61  TLPTGLQLGLGVRTVATSRSFSQGNLQQSSNNLDVAIQGNGFFQVTMPDGTTGYTRDGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQKGKVIATMGLYSVDM 165
           ++ + G LV+++G   +  +                       +   + I T+ L S   
Sbjct: 121 QIDNAGRLVTSNGLPILNGINIPANATSVAIAQDGAVTAMVPGNVAPQPIGTITLASFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   +  +  + +                 T+ +GF+E SN N + E+  MI   + +
Sbjct: 181 PAGLEPKGQNIYAESTASGQPNAGTAGANGLGTLAQGFVETSNVNVVQELVTMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEA 237
              +  I  +++ + + 
Sbjct: 241 EMNSKAIQTSDQMLQKL 257


>gi|85712256|ref|ZP_01043307.1| Flagella basal body rod protein [Idiomarina baltica OS145]
 gi|85693883|gb|EAQ31830.1| Flagella basal body rod protein [Idiomarina baltica OS145]
          Length = 262

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 47/262 (17%), Positives = 96/262 (36%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +  I      A ++ +S +++N++N  TVGF+  +  F +++    N    +     
Sbjct: 1   MNPALWISKTGLDAQQRDISVISNNLANASTVGFKKSRAIFEDLLYQNINQPGGQSAQDV 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                    +         S   G+  +T   LD  + G  +F +  P G +  TR+G+F
Sbjct: 61  ELPNGLMLGAGTKVVATQKSHTQGNVQTTDNSLDVMINGKGFFQVLMPDGTLSYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEIS--QKGKVIATMGLYSVD 164
            V ++G+LV++   YP+     +P                      +  VI  + L S  
Sbjct: 121 SVNEEGTLVTSGNGYPIEPQIQIPEDAISLSISQEGEVTVRQPGNAQNAVIGQLNLASFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +           ++          V++G LE SN N   E+  +I   + 
Sbjct: 181 NPAGLEPIGQNLYKETAVSGAPQESVPGVDGVGNVRQGMLETSNVNVTEELVNLIEAQRG 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   ++ +    + +
Sbjct: 241 YEMNSKVISSVDQMLSYINQQL 262


>gi|57505521|ref|ZP_00371448.1| flagellar basal-body rod protein (flgG) [Campylobacter upsaliensis
           RM3195]
 gi|57016068|gb|EAL52855.1| flagellar basal-body rod protein (flgG) [Campylobacter upsaliensis
           RM3195]
          Length = 263

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 40/262 (15%), Positives = 93/262 (35%), Gaps = 22/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS--- 57
           M  S +      +A + ++   ++N+SN +TVGF+  + +F++++           S   
Sbjct: 1   MMRSLHTAATGMVAQQTQIDVTSNNISNVNTVGFKKSRAEFADLMYQTMKYAGTSTSATT 60

Query: 58  -----------FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGR 105
                         +    +        ++    D A+EG+ +F ++ P      TR+G+
Sbjct: 61  LSPSGIEVGLGVRPTAVTKIFTPGSYKSTSTDSFDMAIEGNGFFQIQLPDGTTAYTRNGQ 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVD 164
           F   ++G++V+A G   + +M                        Q+   I  + L    
Sbjct: 121 FTRDNEGNVVNADGYRLIPEMTVPEGATNISIAKDGTVSVMLAGEQEETQIGQIELVQFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G     ++                       ++ GF+E SN   + EM  +I   + 
Sbjct: 181 NPAGLHSMGDNLYLETGASGAPVAGIAGQDGLGNIRHGFVELSNVQLVEEMTDLITGQRA 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           + + +  I  +++ +   +  +
Sbjct: 241 YEAGSKAITTSDEMLG-IVNQL 261


>gi|157373205|ref|YP_001471805.1| flagellar basal-body rod protein FlgG [Shewanella sediminis
           HAW-EB3]
 gi|157315579|gb|ABV34677.1| flagellar basal-body rod protein FlgG [Shewanella sediminis
           HAW-EB3]
          Length = 261

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 44/261 (16%), Positives = 104/261 (39%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           MQ++  +      A + +++T+A+N++N +T GF+  +V F+++    +           
Sbjct: 1   MQSALWVSKTGLTAQDVKMTTIANNLANVNTTGFKRDRVAFNDLFYQTQRQPGGQVDELN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106
                 Q  +             G  ++T  +LD A+EG  +F +E     +  +RDG+F
Sbjct: 61  ELPSGLQLGTGTRVVGTQKIFTSGDMLTTNQQLDLAIEGQGFFQIEEANGDLAYSRDGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
               DG +V++ G   V ++      +         V  +     + + +  + L +   
Sbjct: 121 YRNSDGLMVTSQGLPLVPNIEIPEDALTITIATDGIVTAQISGQAEAQELGQITLVNFTN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   R ++            +      +   +++G LE +N N + EM +MI   + +
Sbjct: 181 PTGLEARGDNLYRETGASGAAIEGVAGDQAIGQLRQGALEGANVNVVEEMVEMISTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
                ++  ++  +    +++
Sbjct: 241 EMNAKVVSASDDMLKFLNQSL 261


>gi|323492336|ref|ZP_08097489.1| flagellar basal body rod protein FlgG [Vibrio brasiliensis LMG
           20546]
 gi|323313383|gb|EGA66494.1| flagellar basal body rod protein FlgG [Vibrio brasiliensis LMG
           20546]
          Length = 261

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 44/261 (16%), Positives = 98/261 (37%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M ++  +      A + +++ +++N++N +TVGF+  +V F ++  +I+           
Sbjct: 1   MHSALWVSKTGMAAQDTKMTAISNNLANVNTVGFKRDRVVFEDLFYSIQRQPGAQVDQVN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106
                 Q  S V           G+  +T  + D A+ G  +F +E+    I+ TR+G+F
Sbjct: 61  ELPSGVQLGSGVRVVGTQKVFTQGNTQNTSQQYDLAVMGQGFFQIENSDGQIMYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
            V  +G +V++ G      +      +     +   V      S   + +  + L     
Sbjct: 121 HVNSEGLMVNSQGLPLEPQIQIPDNALSLSVGVDGTVTATTVDSSTPEQLGQITLAKFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +           ++          +K+G LE SN   + EM  MI   + +
Sbjct: 181 PAGLEAVGGNLFRETEASGQADELTAGEDGVGIIKQGALEGSNVQVVEEMVDMITTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
                ++   +  +    +++
Sbjct: 241 EMNAKVVSAADDMLKFVAQSV 261


>gi|89902479|ref|YP_524950.1| flagellar basal-body rod FlgG [Rhodoferax ferrireducens T118]
 gi|89347216|gb|ABD71419.1| Flagellar basal-body rod FlgG [Rhodoferax ferrireducens T118]
          Length = 260

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 48/257 (18%), Positives = 96/257 (37%), Gaps = 20/257 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A + +L  +++N++N  T GF+     F +++               
Sbjct: 1   MINSLWISKTGMEAQQMQLDVISNNLANVSTNGFKRASAVFEDLMYQNLRQAGSNSSEQS 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                 Q    V +     S   G+   +G +LD A++G+ +F +  P G    TRDG F
Sbjct: 61  QLPTGLQVGLGVRTVATSRSFAQGNLQQSGNKLDVAIQGNGFFQVTMPDGTTNYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDE-IFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V+  G LV+A+G      +                V  +   +   + I ++ L S   
Sbjct: 121 QVSSTGQLVTATGLPIANGVTVPANATSIAIAGDGTVTAQVPGTPTPQGIGSISLASFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   +  +  + +                  + +G++E SN N + E+  MI   + +
Sbjct: 181 PAGLDPKGQNLYAESTASGQPNSGTPGADGMGALMQGYVETSNVNVVQELVTMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEA 237
              +  I  +++ + + 
Sbjct: 241 EMNSKAIQTSDQMLQKL 257


>gi|289679021|ref|ZP_06499911.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           syringae FF5]
 gi|330972416|gb|EGH72482.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           aceris str. M302273PT]
          Length = 262

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 44/262 (16%), Positives = 97/262 (37%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  +      A +  L+T+++N++N  T GF++ + +F +++  IK           
Sbjct: 1   MLPALYVAKTGLAAQDTNLTTISNNLANVSTTGFKSDRAEFQDLLYQIKRQPGAQSTQDS 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V       +   GS  +T   LD A+ G  +F +  P   I  +RDG F
Sbjct: 61  ELPSGLQLGTGVRIVGTQKNFTAGSLQTTNNPLDLAVNGRGFFQVTQPDGTIAYSRDGTF 120

Query: 107 KVTDDGSLVSASGK--YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
            +  +G +V+A+G    P + +           +          +   ++I  +      
Sbjct: 121 HLDANGQIVTANGYALEPAIVVPQNAQTFTVGQDGTVSVTLAGATATPQIIGNIQTADFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +           +  +          +  LE+SN +++ E+  MI   + 
Sbjct: 181 NPAGLQAMGGNLYLETGSSGAPQIGTPGLNGLGPTLQNTLENSNVSTVEELVNMITTQRA 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   ++ +    +N+
Sbjct: 241 YEMNSKVISTADQMLQNLTQNL 262


>gi|312111671|ref|YP_003989987.1| fagellar hook-basal body protein [Geobacillus sp. Y4.1MC1]
 gi|311216772|gb|ADP75376.1| fagellar hook-basal body protein [Geobacillus sp. Y4.1MC1]
          Length = 268

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 53/265 (20%), Positives = 96/265 (36%), Gaps = 26/265 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++A    + +L  + +N++N +T GF+  +  F ++V               
Sbjct: 1   MLRSMYSGISAMKNFQVKLDVIGNNIANVNTYGFKKGRTIFKDLVSQQIAGASGPTANRG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI--ILTRDGRF 106
                Q    +           GS   TG  LD A+ GD +F LE   G   + TR G F
Sbjct: 61  GVNPKQVGLGMQLAAIDTVHTQGSTQPTGRPLDLAISGDGFFVLEDANGTNRLYTRAGNF 120

Query: 107 KVTD----DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162
            +      +  +VSA G+Y +     + I +  +                  + T G   
Sbjct: 121 YLDAGDGTNRYIVSADGRYLLGTSGRIRIPVTAQSVSIGTDGTVSYVDANGQLQTAGKIR 180

Query: 163 ---VDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMI 214
                 ++G  +  ++   P       +          T+  G LE SN +   E  +MI
Sbjct: 181 LAKFSNNEGLEKVGDNLFRPTANSGDPQIGDVGDNGTGTIVSGALEMSNVDLAEEFTEMI 240

Query: 215 HLTQKFNSITTLIDENEKSMLEAIR 239
              + F + T +I  +++ + E + 
Sbjct: 241 VAQRGFQANTRIITTSDEILQELVN 265


>gi|307721135|ref|YP_003892275.1| flagellar basal-body rod protein FlgG [Sulfurimonas autotrophica
           DSM 16294]
 gi|306979228|gb|ADN09263.1| flagellar basal-body rod protein FlgG [Sulfurimonas autotrophica
           DSM 16294]
          Length = 262

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 41/259 (15%), Positives = 94/259 (36%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S        L ++ ++ T A+N++N +T+GF+  + +F++++  +            
Sbjct: 1   MMQSLYTASTGMLGMQTQIDTTANNIANVNTIGFKKSRAEFADLMYHVMEYAGTSTSDTT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                      V           GS   T   LD A+ G  +F +E P    + +++G F
Sbjct: 61  KSPTGIEVGLGVRPTAINKIFSEGSLKQTDNNLDLAITGKGFFKMELPDGTEVYSKNGAF 120

Query: 107 KVTDDGSLVSASGKY-PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           K+  DG++V++ G       +               V        +   I  +   +   
Sbjct: 121 KIDQDGTVVNSDGYTLIPQIVIPPDATNINIGTDGTVTVIQPGQTQATQIGQIQTTNFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++            +         T+++GF+E SN   + E+  +I   + +
Sbjct: 181 PAGLHAMGDNLYIETDSSGQPVEGIPGVDGLGTIRQGFVELSNVELVVELTDLITGQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
           ++ + +I  +++ +     
Sbjct: 241 DANSKIITTSDEMLQTTNN 259


>gi|315637964|ref|ZP_07893150.1| flagellar basal-body rod protein FlgG [Campylobacter upsaliensis
           JV21]
 gi|315481999|gb|EFU72617.1| flagellar basal-body rod protein FlgG [Campylobacter upsaliensis
           JV21]
          Length = 263

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 40/262 (15%), Positives = 93/262 (35%), Gaps = 22/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS--- 57
           M  S +      +A + ++   ++N+SN +TVGF+  + +F++++           S   
Sbjct: 1   MMRSLHTAATGMVAQQTQIDVTSNNISNVNTVGFKKSRAEFADLMYQTMKYAGTSTSATT 60

Query: 58  -----------FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGR 105
                         +    +        ++    D A+EG+ +F ++ P      TR+G+
Sbjct: 61  LSPSGIEVGLGVRPTAVTKVFTPGSYKSTSTDSFDMAIEGNGFFQIQLPDGTTAYTRNGQ 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVD 164
           F   ++G++V+A G   + +M                        Q+   I  + L    
Sbjct: 121 FTRDNEGNVVNADGYRLIPEMTVPEGATNISIAKDGTVSVMLAGEQEETQIGQIELVQFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G     ++                       ++ GF+E SN   + EM  +I   + 
Sbjct: 181 NPAGLHSMGDNLYLETGASGAPVAGIAGQDGLGNIRHGFVELSNVQLVEEMTDLITGQRA 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           + + +  I  +++ +   +  +
Sbjct: 241 YEAGSKAITTSDEMLG-IVNQL 261


>gi|241589578|ref|YP_002979603.1| flagellar basal-body rod protein FlgG [Ralstonia pickettii 12D]
 gi|240868290|gb|ACS65949.1| flagellar basal-body rod protein FlgG [Ralstonia pickettii 12D]
          Length = 261

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 89/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A + +L  V++N++N +T GF+  +  F +++     +         
Sbjct: 1   MIRSLWISKTGMEAQQTQLDVVSNNLANVNTTGFKRSRAVFEDLLYQNAREPGAQSSQQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  +             G+   TG   D A+ G+ +F ++ P G    TRDG F
Sbjct: 61  ALPSGMQIGTGTRIVATSRLHSQGNLSKTGNATDVAINGNGFFQVQRPDGTLAYTRDGNF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-IATMGLYSVDM 165
           +++  G LV++SG      M               V          +  +    L +   
Sbjct: 121 QISAQGQLVTSSGYLVQPAMMVPRNATSLMIGKDGVVTVTTPGMVNRTQVGAFQLANFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +  +                    + + ++E SN N + EM Q+I   + +
Sbjct: 181 PAGLRSLGENLYAETEASGGANLAVPGGNGLGMLHQNYVETSNVNVVEEMIQLIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +   ++ + +  +
Sbjct: 241 EINSKAVQTADRMLEKIAQ 259


>gi|146294548|ref|YP_001184972.1| flagellar basal-body rod protein FlgG [Shewanella putrefaciens
           CN-32]
 gi|145566238|gb|ABP77173.1| flagellar basal-body rod protein FlgG [Shewanella putrefaciens
           CN-32]
          Length = 261

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 43/261 (16%), Positives = 105/261 (40%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           MQ++  +      A + +++ +A+N++N +T GF+  +V F+++   ++           
Sbjct: 1   MQSALWVSKTGLTAQDTKMTAIANNLANVNTTGFKRDRVAFNDLFYQVQRQPGGQVDALN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  +             G   +T  +LD A++G  +F +E P   +  TRDG+F
Sbjct: 61  NLPSGLQLGAGTRVVGTQKIFTTGDMQNTSQQLDLAIQGHGFFQVEEPNGDLAYTRDGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
             + +G +V++ G   V ++      +         V  +     + + +  + L +   
Sbjct: 121 YRSSEGMMVTSQGLPLVPNIVIPEDALTVTIASDGVVTAQMAGEAEPQDLGQITLVNFTN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   R ++            +      +   +++G LE +N N + EM +MI   + +
Sbjct: 181 PSGLEARGDNLYRETAASGVAVEGVAGDQALGALRQGALEGANVNVVEEMVEMISTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
                ++  ++  +    +++
Sbjct: 241 EMNAKVVSASDDMLKFLNQSV 261


>gi|188579923|ref|YP_001923368.1| flagellar basal body rod protein [Methylobacterium populi BJ001]
 gi|179343421|gb|ACB78833.1| flagellar basal body rod protein [Methylobacterium populi BJ001]
          Length = 242

 Score =  166 bits (420), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 74/243 (30%), Positives = 136/243 (55%), Gaps = 5/243 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           MQ+S  + L++Q+ALE+RL+T A+N++N  T GFR  +V FSE++         +++FV 
Sbjct: 1   MQSSLYVALSSQIALEKRLTTTANNVANMATAGFRAEEVSFSELLARSNRG---EVAFVG 57

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
            GK  LS+  G    T + LD A++GDAW  ++ P+   + TRDGR  +  +G L +  G
Sbjct: 58  PGKNTLSRAAGPTTKTDSALDVAVQGDAWLGVKGPKGDTLYTRDGRLTMDANGQLRTV-G 116

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
             PV+D    P+ +  +     +G  G I Q    +  +G++S+D      R   + ++ 
Sbjct: 117 GMPVVDPGGGPLLLDPQAGPPTIGRDGSIHQGVNQVGALGVFSLDPKATLSRSGENAVAA 176

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           ++P  P++D + + V +G++E +N N + EM ++I + + F S  T+  E + ++  A++
Sbjct: 177 SLPGRPVQDFTRIGVVQGYVEGANVNPILEMTRLIAIQRAFESAATMTSEADNTLTGAVK 236

Query: 240 NIA 242
            + 
Sbjct: 237 TLG 239


>gi|120597307|ref|YP_961881.1| flagellar basal-body rod protein FlgG [Shewanella sp. W3-18-1]
 gi|120557400|gb|ABM23327.1| flagellar basal-body rod protein FlgG [Shewanella sp. W3-18-1]
          Length = 261

 Score =  166 bits (420), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 43/261 (16%), Positives = 105/261 (40%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           MQ++  +      A + +++ +A+N++N +T GF+  +V F+++   ++           
Sbjct: 1   MQSALWVSKTGLTAQDTKMTAIANNLANVNTTGFKRDRVAFNDLFYQVQRQPGGQVDALN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  +             G   +T  +LD A++G  +F +E P   +  TRDG+F
Sbjct: 61  NLPSGLQLGAGTRVVGTQKIFTTGDMQNTSQQLDLAIQGHGFFQVEEPNGDLAYTRDGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
             + +G +V++ G   V ++      +         V  +     + + +  + L +   
Sbjct: 121 YRSSEGMMVTSQGLPLVPNIVIPEDALTVTIASDGVVTAQMAGEAEPQDLGQITLVNFTN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   R ++            +      +   +++G LE +N N + EM +MI   + +
Sbjct: 181 PAGLEARGDNLYRETAASGVAVEGVAGDQALGALRQGALEGANVNVVEEMVEMISTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
                ++  ++  +    +++
Sbjct: 241 EMNAKVVSASDDMLKFLNQSV 261


>gi|77457729|ref|YP_347234.1| flagellar basal body rod protein FlgG [Pseudomonas fluorescens
           Pf0-1]
 gi|77381732|gb|ABA73245.1| flagellar basal-body rod protein [Pseudomonas fluorescens Pf0-1]
          Length = 261

 Score =  166 bits (420), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 51/261 (19%), Positives = 96/261 (36%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  +      A +  L+T+++N++N  T GF+  + +F +++  IK           
Sbjct: 1   MLPALWVAKTGLSAQDTNLTTISNNLANVSTTGFKRDRAEFQDLLYQIKRQPGAQSTQDS 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                 Q  + V       +   GS  +T   LD A++G  +F +  P G    TRDG F
Sbjct: 61  ELPSGLQVGTGVRIVGTQKNFTAGSLQTTEQPLDMAIDGRGFFQILQPDGTTSYTRDGTF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
            +  +G +V+ASG      +      Q         V      +   +VI  +       
Sbjct: 121 HLDSNGQIVNASGFALEPAIVIPNNAQTFTVGRDGTVSITVAGNPAAQVIGNLQTADFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     N+           +          T  +  LE SN +++ EM  MI   + +
Sbjct: 181 PAGLQAVGNNLFLETAASGAPQVGTPGLNGFGTTLQNTLETSNVSTVEEMVNMITTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
              + +I   ++ +    +N+
Sbjct: 241 EMNSKVISTADQMLSFVTQNL 261


>gi|315127351|ref|YP_004069354.1| flagellar basal body rod protein FlgG [Pseudoalteromonas sp.
           SM9913]
 gi|315015865|gb|ADT69203.1| flagellar basal body rod protein FlgG [Pseudoalteromonas sp.
           SM9913]
          Length = 262

 Score =  166 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 43/262 (16%), Positives = 96/262 (36%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +  I      A +  +S +++N++N  TVG++  +  F +++    N    +     
Sbjct: 1   MNPALWISKTGLDAQQTDISVISNNLANASTVGYKKSRAIFEDLLYQNINQPGGRSSQDT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    +         +   G+ ++T   LD+ + G  +F +  P   I  +R+G+F
Sbjct: 61  EMPSGLMLGAGTKVVANQKNFSQGNMLTTENSLDWMISGPGFFEVLQPDGNIAYSRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFN--VGEKGEISQKGKVIATMGLYSVD 164
               +G +V++   Y V    +VP          +  V  + +   +  VI  + +    
Sbjct: 121 TTDGEGRVVTSGAGYVVQPEMNVPDDAQSITVSQDGEVSVRIKGQAENVVIGQITISDFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +  +           +       T+ +G LE SN N   E+  +I   + 
Sbjct: 181 NPSGLEPIGQNLYTETAVSGAPVQGNPGVEGLGTIIQGSLETSNVNVTEELVNLIETQRV 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   ++ M    + +
Sbjct: 241 YEMNSKVISAVDEMMSYINQQL 262


>gi|24112486|ref|NP_706996.1| flagellar basal body rod protein FlgG [Shigella flexneri 2a str.
           301]
 gi|30062614|ref|NP_836785.1| flagellar basal body rod protein FlgG [Shigella flexneri 2a str.
           2457T]
 gi|24051372|gb|AAN42703.1| flagellar basal body rod protein flgG [Shigella flexneri 2a str.
           301]
 gi|30040860|gb|AAP16591.1| flagellar basal body rod protein flgG [Shigella flexneri 2a str.
           2457T]
 gi|281600496|gb|ADA73480.1| Flagellar basal body rod protein flgG [Shigella flexneri 2002017]
 gi|313650470|gb|EFS14877.1| flagellar basal-body rod protein FlgG [Shigella flexneri 2a str.
           2457T]
 gi|332758238|gb|EGJ88561.1| flagellar basal-body rod protein FlgG [Shigella flexneri 4343-70]
 gi|332759659|gb|EGJ89964.1| flagellar basal-body rod protein FlgG [Shigella flexneri 2747-71]
 gi|332761424|gb|EGJ91708.1| flagellar basal-body rod protein FlgG [Shigella flexneri K-671]
 gi|332767686|gb|EGJ97879.1| flagellar basal-body rod protein FlgG [Shigella flexneri 2930-71]
 gi|333005399|gb|EGK24917.1| flagellar basal-body rod protein FlgG [Shigella flexneri K-218]
 gi|333019426|gb|EGK38709.1| flagellar basal-body rod protein FlgG [Shigella flexneri K-304]
          Length = 260

 Score =  166 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 41/259 (15%), Positives = 87/259 (33%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M +S  I      A +  +  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+   T    D A++G  +F +  P       RDG F
Sbjct: 61  TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGSSAYIRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V  +G LV+A G      +      +         V    +       +  + L +   
Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +  +         + +        + +G++E SN N   E+  MI + + +
Sbjct: 181 DTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +   ++ + +  +
Sbjct: 241 EINSKAVSTTDQMLQKLTQ 259


>gi|225548842|ref|ZP_03769819.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           94a]
 gi|225370445|gb|EEG99881.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           94a]
          Length = 282

 Score =  166 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 49/280 (17%), Positives = 105/280 (37%), Gaps = 38/280 (13%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51
           M        +  +A  ++L TV++N++N D +G++        F E++    ND      
Sbjct: 1   MVRGIYTAASGMMAERRKLDTVSNNLANIDLIGYKKDLSIQKAFPEMLIRRLNDDGLYKF 60

Query: 52  ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101
                     + +  + V   + Y   E G   +TG  LD AL    +F +++  G   T
Sbjct: 61  PKGHLETAPVVGKIGTGVEENEIYTVFEQGPLKTTGNPLDLALTDQGFFVIQTSDGERYT 120

Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI------------- 148
           R+G F +  +G LV+ SG   + +   + ++                             
Sbjct: 121 RNGSFTIGKEGILVTKSGFPVLGEKGYIYLKKNNFKITPQGQIFHNSNFESDPKRLVSEY 180

Query: 149 ---SQKGKVIATMGLYSVDMSQGFVRRENSGIS---PNIPPTPLEDLSGVTVKRGFLEDS 202
               +  +++ T+ + + +  +   ++ NS       +     ++      ++   LE S
Sbjct: 181 ENSWENYELLDTIRIVNFENPRFLKKQGNSLWIDTKTSGKAQEIDISLRPKIETETLEAS 240

Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           N N++ EM  MI + + + +    I   +  + + I  I 
Sbjct: 241 NVNTVKEMVLMIEINRAYEANQKTIQTEDSLLGKLINEIG 280


>gi|90415316|ref|ZP_01223250.1| flagellar basal-body rod protein FlgG (distal rod protein) [marine
           gamma proteobacterium HTCC2207]
 gi|90332639|gb|EAS47809.1| flagellar basal-body rod protein FlgG (distal rod protein) [marine
           gamma proteobacterium HTCC2207]
          Length = 261

 Score =  166 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 51/261 (19%), Positives = 96/261 (36%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S  I      A + R+S +++N++N +T GF+  +  F +++         +     
Sbjct: 1   MDASLWIAKTGLTAQQTRMSVISNNLANVNTTGFKKDRAVFEDLLYQNIVPAGGQVDAES 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    +             G+ I+T   LD A+ GD +F+++     I  +RDG F
Sbjct: 61  ETPTGLMLGTGTRVVATEKLHAQGNIITTENALDLAISGDGYFSVQQADGTIAYSRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG-KVIATMGLYSVDM 165
           K++ +G+LV+A G+  +  +               V      +  G   I  + L     
Sbjct: 121 KLSAEGNLVTAGGQTLLPAITVPQNAASLTIGRDGVVTVELSNGGGSSQIGQLQLSRFVN 180

Query: 166 SQGFVRRENSGI-SPNIPPTP----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
           + G      + +   N    P            + +G LE SN N + EM  MI   + +
Sbjct: 181 NSGLQPIGRNLMQQTNASGDPLVVLPGADGAGMLMQGALEASNVNVVEEMVNMIETQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
              +  I   +  +     N+
Sbjct: 241 EVNSKAISAADGMLRFLNNNL 261


>gi|223889387|ref|ZP_03623973.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           64b]
 gi|223885073|gb|EEF56177.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           64b]
          Length = 282

 Score =  166 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 49/280 (17%), Positives = 105/280 (37%), Gaps = 38/280 (13%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51
           M        +  +A  ++L TV++N++N D +G++        F E++    ND      
Sbjct: 1   MVRGIYTAASGMMAERRKLDTVSNNLANIDLIGYKKDLSIQKAFPEMLIRRLNDDGLYKF 60

Query: 52  ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101
                     + +  + V   + Y   E G   +TG  LD AL    +F +++  G   T
Sbjct: 61  PKGHLETAPVVGKIGTGVEENEIYTVFEQGPLKTTGNPLDLALTDQGFFVIQTSDGERYT 120

Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI------------- 148
           R+G F +  +G LV+ SG   + +   + ++                             
Sbjct: 121 RNGSFTIGKEGILVTKSGFPVLGEKGYIYLKKNNFKITHQGQVFHNSNFESDPKRLVSEY 180

Query: 149 ---SQKGKVIATMGLYSVDMSQGFVRRENSGIS---PNIPPTPLEDLSGVTVKRGFLEDS 202
               +  +++ T+ + + +  +   ++ NS       +     ++      ++   LE S
Sbjct: 181 ENSWENYELLDTIRIVNFENPRFLKKQGNSLWIDTKTSGKAQEIDISLRPKIEIETLEAS 240

Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           N N++ EM  MI + + + +    I   +  + + I  I 
Sbjct: 241 NVNAVKEMVLMIEINRAYEANQKTIQTEDSLLGKLINEIG 280


>gi|116250482|ref|YP_766320.1| flagellar basal body rod protein FlgG [Rhizobium leguminosarum bv.
           viciae 3841]
 gi|115255130|emb|CAK06204.1| flgG [Rhizobium leguminosarum bv. viciae 3841]
          Length = 262

 Score =  166 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 43/261 (16%), Positives = 92/261 (35%), Gaps = 21/261 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----------- 50
             +  I      A +  L  +A+N++N +T GF+  + +FS+++   +            
Sbjct: 1   MRALAIAATGMDAQQTNLEVIANNIANINTTGFKRARAEFSDLLYQTERAKGVANRANQA 60

Query: 51  ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRF 106
              +       V +         G    TG +LD AL G  +F ++ +    + +R G F
Sbjct: 61  VVPEGANIGLGVQTSAVRNLHLQGELTQTGNDLDVALIGKGFFQIQSTDGTTLYSRAGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
              D G LV+  G   +  +                V  K   + +   +  + L     
Sbjct: 121 NKNDQGQLVTIDGYEVLPGITIPTGSTELTISRSGQVSAKLPGATEATELGQLTLADFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++              +        +K+G+LE SN + + E+ ++I   + +
Sbjct: 181 EAGLQPLGDNLFQETPASGEAVIGNPDEEGFAYMKQGYLESSNVDPVKEITELISAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
              + +I   ++      +N+
Sbjct: 241 EMNSKVITTADEMASIVSKNL 261


>gi|189426330|ref|YP_001953507.1| flagellar basal body rod protein FlgG [Geobacter lovleyi SZ]
 gi|189422589|gb|ACD96987.1| flagellar basal-body rod protein FlgG [Geobacter lovleyi SZ]
          Length = 262

 Score =  166 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 45/261 (17%), Positives = 92/261 (35%), Gaps = 21/261 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S     +      Q ++ +A+N++N +T GF+  +  F +++     +         
Sbjct: 1   MMRSLWTAASGMNTQTQNINVIANNLANVNTTGFKKSRADFQDLMYQTVQNPGSPSTNAA 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q                G F +TG +LD A+EGD +F ++ P      +R G F
Sbjct: 61  QIPVGIQFGMGSKLAAVSKQFTPGDFSNTGGQLDMAIEGDGFFQIQMPDGSTAYSRAGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           K+  +G +V+  G   + ++                V            +  + + +   
Sbjct: 121 KMDSNGRVVTPEGYPMLPEIVIPNNSTKITIGTDGTVSAVQSGQSTASTVGNIQIANFTN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +              +       T+ +GFLE SN +   EM  MI   + +
Sbjct: 181 PAGLSSMGKNFYQQTDASGNATTGTPGQTGLGTITQGFLEMSNVDVATEMVNMIIGQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
            + +  I  +++ + +   N+
Sbjct: 241 EANSKAITTSDEML-QLANNL 260


>gi|86151551|ref|ZP_01069765.1| flagellar basal-body rod protein FlgG [Campylobacter jejuni subsp.
           jejuni 260.94]
 gi|85841180|gb|EAQ58428.1| flagellar basal-body rod protein FlgG [Campylobacter jejuni subsp.
           jejuni 260.94]
          Length = 263

 Score =  166 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 40/262 (15%), Positives = 95/262 (36%), Gaps = 22/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S +      +A + ++   ++N++N +T GF+  + +F++++  +            
Sbjct: 1   MMRSLHTAATGMVAQQTQIDVTSNNIANVNTAGFKKSRAEFADLMYQVMKYAGTSTSATT 60

Query: 56  ---------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGR 105
                    +    +    +  E     +    LD A+ G+ +F ++ P G I  TR+G+
Sbjct: 61  LSPSGIEVGVGVRPTAVTKVFTEGNLKSTNTDGLDMAIAGNGFFQIQLPDGTIGYTRNGQ 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVD 164
           F   ++G++V++ G   + +M                        Q+   I  + L    
Sbjct: 121 FTKDNEGNIVNSDGYRLLPEMTIPEGATAINVATDGTVSVMLPGEQQETQIGQVELVQFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G     ++                      T++ GF+E SN   + EM  +I   + 
Sbjct: 181 NPAGLHSMGDNLYLETGASGAPVAGIAGQDGLGTIRHGFIELSNVQLVEEMTDLITGQRA 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           + + +  I  ++  +   +  +
Sbjct: 241 YEAGSKAITTSDDMLG-IVNQL 261


>gi|330818583|ref|YP_004362288.1| flagellar basal-body rod protein FlgG [Burkholderia gladioli BSR3]
 gi|327370976|gb|AEA62332.1| flagellar basal-body rod protein FlgG [Burkholderia gladioli BSR3]
          Length = 262

 Score =  166 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 88/259 (33%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A + ++  +++N++N  T GF+  +  F +++               
Sbjct: 1   MNRSLYIAATGMNAQQAQMDVISNNLANVSTNGFKGSRAVFEDLLYQTVRQPGANSTQQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+   TG   D A++G  +F +  P      TRDG F
Sbjct: 61  ELPSGLQLGTGVQQVATERLYTQGALTQTGNSRDIAIDGSGFFQVLMPDGTTAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
              + G LV++SG   +  +                V      S     I  M + +   
Sbjct: 121 HPNNQGQLVTSSGYQVLPAITVPQNAQSLTIGTDGVVTVTQPGSTNAVQIGAMQIATFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
            +G      +  +                   ++ +G++E SN N + E+  MI   + +
Sbjct: 181 PEGLQALGQNLFAETTSSGVPNVTTPGLNGAGSLNQGYVESSNVNVVQELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ +    +
Sbjct: 241 EINSKAVTTSDQMLQTVTQ 259


>gi|326202442|ref|ZP_08192311.1| fagellar hook-basal body protein [Clostridium papyrosolvens DSM
           2782]
 gi|325987560|gb|EGD48387.1| fagellar hook-basal body protein [Clostridium papyrosolvens DSM
           2782]
          Length = 270

 Score =  166 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 51/270 (18%), Positives = 107/270 (39%), Gaps = 29/270 (10%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +     +   A +  +  +++N++N +T G++  + +F +++    +          
Sbjct: 1   MMRALYTAGSGMKAQQFNVDVISNNLANVNTTGYKKERAEFKDLLYQTMDRAYVLNGGGK 60

Query: 54  ----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKV 108
               Q            + E G+   TG+ LDFA++G+ +F +  P+G +  TRDG FK+
Sbjct: 61  PVNLQVGHGTVVSSTIRNFENGTPEQTGSTLDFAIDGEGFFTIMGPQGTVKYTRDGSFKL 120

Query: 109 T---DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI--------AT 157
           +   D    ++ S  Y VLD +   I    + +   +          K           T
Sbjct: 121 SITEDGMKKLTTSDGYAVLDNSGGEILFDPEVKTSELSVSPRGEMSYKNAEGVSVPMDQT 180

Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQ 212
           +G+ +           N+  S N           ++ +   +K+GFLE SN   + EM +
Sbjct: 181 IGMVTFPNKYALEAVGNNLYSSNSATGEPLQVSEDENAKSIMKQGFLESSNVQVVDEMVK 240

Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           +I   + +   +  I  ++  + +   N+ 
Sbjct: 241 LIVAQRAYEVSSKAIQSSDDML-QIANNLR 269


>gi|254521223|ref|ZP_05133278.1| flagellar basal-body rod protein FlgG [Stenotrophomonas sp. SKA14]
 gi|219718814|gb|EED37339.1| flagellar basal-body rod protein FlgG [Stenotrophomonas sp. SKA14]
          Length = 257

 Score =  166 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 51/257 (19%), Positives = 87/257 (33%), Gaps = 20/257 (7%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID----------- 53
             I      A + R+S V++N++NT+T GF+  +  F +++                   
Sbjct: 1   MWIAKTGLDAQQMRMSVVSNNLANTNTTGFKQDRASFEDLLYQQVRQPGGSSSAQTQLPT 60

Query: 54  --QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTD 110
             Q  + V       + E G    TG  LD  + G  +F ++ P      TRDG FK+  
Sbjct: 61  GLQLGTGVRVVATAKNFEQGGQQQTGRALDVMVNGRGFFEVQMPDGSSAYTRDGSFKINQ 120

Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDMSQGF 169
           D  LV+ SG      +                +  K         +  + L       G 
Sbjct: 121 DSELVTNSGYPVQPGIQIPEGAQSVTIGTDGTISVKMADGAASVEVGALTLTDFVNPAGL 180

Query: 170 VRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224
             R  +         P ++ +       TV +G LE SN N + E+  MI   + +    
Sbjct: 181 QARGENLFLETTASGPAQNGNPGLNGLGTVVQGALEGSNVNVVEELVSMIETQRAYEMNA 240

Query: 225 TLIDENEKSMLEAIRNI 241
             I   +  +      +
Sbjct: 241 KAISTTDSMLGYLNNKL 257


>gi|241203106|ref|YP_002974202.1| flagellar basal body rod protein FlgG [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240856996|gb|ACS54663.1| flagellar basal-body rod protein FlgG [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 262

 Score =  166 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 43/261 (16%), Positives = 92/261 (35%), Gaps = 21/261 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----------- 50
             +  I      A +  L  +A+N++N +T GF+  + +FS+++   +            
Sbjct: 1   MRALAIAATGMDAQQTNLEVIANNIANINTTGFKRARAEFSDLLYQTERAKGVANRANQA 60

Query: 51  ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRF 106
              +       V +         G    TG +LD AL G  +F ++ +    + +R G F
Sbjct: 61  VVPEGANIGLGVQTSAVRNLHLQGELTQTGNDLDVALIGKGFFQIQSTDGTTLYSRAGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
              D G LV+  G   +  +                V  K   + +   +  + L     
Sbjct: 121 NKNDQGQLVTIDGYEVLPGITIPTGSTELTISRSGQVTAKLPGATEATELGQLTLADFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++              +        +K+G+LE SN + + E+ ++I   + +
Sbjct: 181 EAGLQPLGDNLFQETPASGEAVIGNPDEEGFAYMKQGYLESSNVDPVKEITELISAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
              + +I   ++      +N+
Sbjct: 241 EMNSKVITTADEMASIVSKNL 261


>gi|22127325|ref|NP_670748.1| flagellar basal body rod protein FlgG [Yersinia pestis KIM 10]
 gi|45442798|ref|NP_994337.1| flagellar basal body rod protein FlgG [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51597635|ref|YP_071826.1| flagellar basal body rod protein FlgG [Yersinia pseudotuberculosis
           IP 32953]
 gi|108809053|ref|YP_652969.1| flagellar basal body rod protein FlgG [Yersinia pestis Antiqua]
 gi|108810750|ref|YP_646517.1| flagellar basal body rod protein FlgG [Yersinia pestis Nepal516]
 gi|145597819|ref|YP_001161895.1| flagellar basal body rod protein FlgG [Yersinia pestis Pestoides F]
 gi|150260247|ref|ZP_01916975.1| lateral flagellar basal body rod protein [Yersinia pestis
           CA88-4125]
 gi|153947407|ref|YP_001399636.1| flagellar basal body rod protein FlgG [Yersinia pseudotuberculosis
           IP 31758]
 gi|162421910|ref|YP_001604845.1| flagellar basal body rod protein FlgG [Yersinia pestis Angola]
 gi|165925150|ref|ZP_02220982.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165939077|ref|ZP_02227629.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166008679|ref|ZP_02229577.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166212222|ref|ZP_02238257.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167399088|ref|ZP_02304612.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167419078|ref|ZP_02310831.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167425222|ref|ZP_02316975.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167466335|ref|ZP_02331039.1| flagellar basal-body rod protein FlgG [Yersinia pestis FV-1]
 gi|186896769|ref|YP_001873881.1| flagellar basal body rod protein FlgG [Yersinia pseudotuberculosis
           PB1/+]
 gi|218927914|ref|YP_002345789.1| flagellar basal body rod protein FlgG [Yersinia pestis CO92]
 gi|229837410|ref|ZP_04457573.1| Flagellar basal-body rod protein flgG [Yersinia pestis Pestoides A]
 gi|229840625|ref|ZP_04460784.1| Flagellar basal-body rod protein flgG [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229842824|ref|ZP_04462976.1| Flagellar basal-body rod protein flgG [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229900947|ref|ZP_04516071.1| Flagellar basal-body rod protein flgG [Yersinia pestis Nepal516]
 gi|270487670|ref|ZP_06204744.1| flagellar basal-body rod protein FlgG [Yersinia pestis KIM D27]
 gi|294502791|ref|YP_003566853.1| putative flagellar basal-body rod protein [Yersinia pestis Z176003]
 gi|21960406|gb|AAM86999.1|AE013948_7 flagellar biosynthesis protein, cell-distal portion of basal-body
           rod [Yersinia pestis KIM 10]
 gi|45437664|gb|AAS63214.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51590917|emb|CAH22573.1| putative flagellar basal-body rod protein [Yersinia
           pseudotuberculosis IP 32953]
 gi|108774398|gb|ABG16917.1| flagellar basal-body rod protein [Yersinia pestis Nepal516]
 gi|108780966|gb|ABG15024.1| putative flagellar basal-body rod protein [Yersinia pestis Antiqua]
 gi|115346525|emb|CAL19402.1| putative flagellar basal-body rod protein [Yersinia pestis CO92]
 gi|145209515|gb|ABP38922.1| flagellar basal-body rod protein [Yersinia pestis Pestoides F]
 gi|149289655|gb|EDM39732.1| lateral flagellar basal body rod protein [Yersinia pestis
           CA88-4125]
 gi|152958902|gb|ABS46363.1| flagellar basal-body rod protein FlgG [Yersinia pseudotuberculosis
           IP 31758]
 gi|162354725|gb|ABX88673.1| flagellar basal-body rod protein FlgG [Yersinia pestis Angola]
 gi|165913033|gb|EDR31658.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165923350|gb|EDR40501.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165992018|gb|EDR44319.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166206968|gb|EDR51448.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|166963072|gb|EDR59093.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167051592|gb|EDR63000.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167055985|gb|EDR65766.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|186699795|gb|ACC90424.1| flagellar basal-body rod protein FlgG [Yersinia pseudotuberculosis
           PB1/+]
 gi|229682286|gb|EEO78378.1| Flagellar basal-body rod protein flgG [Yersinia pestis Nepal516]
 gi|229690091|gb|EEO82148.1| Flagellar basal-body rod protein flgG [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229696991|gb|EEO87038.1| Flagellar basal-body rod protein flgG [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229705533|gb|EEO91543.1| Flagellar basal-body rod protein flgG [Yersinia pestis Pestoides A]
 gi|262360823|gb|ACY57544.1| putative flagellar basal-body rod protein [Yersinia pestis D106004]
 gi|262364768|gb|ACY61325.1| putative flagellar basal-body rod protein [Yersinia pestis D182038]
 gi|270336174|gb|EFA46951.1| flagellar basal-body rod protein FlgG [Yersinia pestis KIM D27]
 gi|294353250|gb|ADE63591.1| putative flagellar basal-body rod protein [Yersinia pestis Z176003]
 gi|320016709|gb|ADW00281.1| Flagellar basal-body rod protein flgG [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 261

 Score =  166 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 43/261 (16%), Positives = 92/261 (35%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M ++  +      A + ++  +++N++N +T GF+  +V F+++    +           
Sbjct: 1   MNSALWVSKTGLAAQDAKMGAISNNLANVNTDGFKRDRVVFADLFYQNQRTPGAPLDQNN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRF 106
                 Q  S V          VG+   T  ++D A+ G  +F +E+  G I  TR G  
Sbjct: 61  TTPSGIQFGSGVQIVGTQKQFTVGNIKVTKGDMDVAITGQGFFQIETADGGIAYTRAGNL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
               DG LV+A G   +  +            +   V        +   +  + L +   
Sbjct: 121 TTNADGVLVNAQGMPLIPQIELPTGSKQLHIGKDGTVTATVGGETEPVEVGQITLVNFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +            +      +   +++G LE SN   + EM  MI + + +
Sbjct: 181 PAGLEAIGGNLYRETAASGEAVEGVPGEEAFGQLEQGALEGSNVQVVEEMVDMITVQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
                ++   +  +    + +
Sbjct: 241 EMNAKMVSAADDMLKFVSQKL 261


>gi|326796595|ref|YP_004314415.1| flagellar basal-body rod protein FlgG [Marinomonas mediterranea
           MMB-1]
 gi|326547359|gb|ADZ92579.1| flagellar basal-body rod protein FlgG [Marinomonas mediterranea
           MMB-1]
          Length = 261

 Score =  166 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 44/261 (16%), Positives = 91/261 (34%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           MQT+         A++++LS +++N++N  T GF+  +  F  ++               
Sbjct: 1   MQTALWTAKTGLTAMDRQLSVISNNLANVSTTGFKKERAVFENLMYQTLKSPGGLSAQNT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106
                 Q  + V       + E G +  T   LD A++G  +F +         TRDG F
Sbjct: 61  ELPSGLQIGAGVRVTGMQKNFEEGDYNVTDRNLDVAIQGAGFFQITRSDGTTAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQKGKVIATMGLYSVDM 165
           ++  +G +V +SG      ++     +                    + I ++ + +   
Sbjct: 121 QLNSEGQMVDSSGNLLDPQISFDSDVVDITIGDDGTVSVLRAGETDQEEIGSITIANFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +                       + +G LE SN NS+ E+  MI   + +
Sbjct: 181 PAGLYFLGGNLYEETSASGAPIVGVPGEEGLGELGQGMLEASNVNSVEELVNMITTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
              + +I   +  +    + +
Sbjct: 241 EMNSKVISTADGMLGFVTQQL 261


>gi|238927617|ref|ZP_04659377.1| flagellar basal body rod protein [Selenomonas flueggei ATCC 43531]
 gi|238884542|gb|EEQ48180.1| flagellar basal body rod protein [Selenomonas flueggei ATCC 43531]
          Length = 264

 Score =  166 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 42/263 (15%), Positives = 89/263 (33%), Gaps = 23/263 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +     +   A + ++  VA N++N +T G + ++ +F ++V     +         
Sbjct: 1   MMRALWSAASGMKAQQSQMDVVAHNIANVNTYGGKKVRAEFQDLVYQTLREAGARNGADS 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q                G+  +T    D  ++G+ +F +  P      TRDG +
Sbjct: 61  QYPTALQIGLGTRLAATQRVFTQGALQTTDNPTDIGIQGEGFFRVTMPDGTTAYTRDGTW 120

Query: 107 KVTDDGSLVSASGKYPVLD---MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
           K+  D  +V++ G           + P+          V  +     + +    + L   
Sbjct: 121 KLDSDRRMVTSDGYLLADGITIGQNAPLDSITISGDGRVSYREAGQNQQQEAGQITLARF 180

Query: 164 DMSQGFVRRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
               G      +    +        +   +    T+ +G LE SN   + EM  MI   +
Sbjct: 181 VNPAGLTAVGKNLFVVSDASGEAIESNPGEDGAGTLTQGTLEMSNVQIVEEMVNMIVSQR 240

Query: 219 KFNSITTLIDENEKSMLEAIRNI 241
            + S +  I  ++  + E    +
Sbjct: 241 AYESNSKAITTSDSML-EIANQL 262


>gi|167626157|ref|YP_001676451.1| flagellar basal-body rod protein FlgG [Shewanella halifaxensis
           HAW-EB4]
 gi|167356179|gb|ABZ78792.1| flagellar basal-body rod protein FlgG [Shewanella halifaxensis
           HAW-EB4]
          Length = 261

 Score =  166 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 45/261 (17%), Positives = 104/261 (39%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           MQ++  +      A + +++T+A+N++N +T GF+  +V F+++   ++           
Sbjct: 1   MQSALWVSKTGLTAQDTKMTTIANNLANVNTTGFKRDRVAFNDLFYQVQRQPGGQVDEQN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                 Q  +             G  ++T  +LD A+EG  +F +E   G +  +RDG+F
Sbjct: 61  ELPSGLQLGTGTRVVGTQKVFTPGDMLTTNQQLDMAIEGQGFFQIEEANGELSYSRDGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
               +G +V++ G   V ++      +         V  +       + +  + L +   
Sbjct: 121 YRNSEGLMVTSQGLPLVPNIEIPEEALTVTIASDGIVSAQMAGQTDAQELGQITLVNFTN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   R N+            +      +   +++G LE +N N + EM +MI   + +
Sbjct: 181 PAGLEARGNNLYRETGASGAAVEGIAGDQALGQIRQGALEGANVNVVEEMVEMISTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
                ++  ++  +    + +
Sbjct: 241 EMNAKVVSASDDMLKFLNQAL 261


>gi|167585196|ref|ZP_02377584.1| flagellar basal-body rod protein FlgG [Burkholderia ubonensis Bu]
          Length = 262

 Score =  166 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 92/259 (35%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A + ++  +++N++N  T G++  +  F +++               
Sbjct: 1   MNRSLYIAATGMNAQQAQMDVISNNLANVSTNGYKGSRAVFEDLLYQTIRQPGANSTQQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           GS   TG   D A++G  +F +  P G    TRDG F
Sbjct: 61  ELPSGLQLGTGVQQVATERLYTQGSLQQTGNSKDLAIDGAGFFQVLMPDGTNAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +    G LV++SG   +  +            +   V  K   S     I ++ + +   
Sbjct: 121 QTNAQGQLVTSSGYQVLPAITVPQNATALTIGKDGVVSVKQAGSNNAVQIGSIQIATFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   +  +  +                   ++ +G++E SN N + E+  MI   + +
Sbjct: 181 PAGLEAKGENLFAETTSSGAPNVSQPGLNGAGSLNQGYVEASNVNVVQELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ +    +
Sbjct: 241 EINSKAVTTSDQMLQNVTQ 259


>gi|157147100|ref|YP_001454419.1| flagellar basal body rod protein FlgG [Citrobacter koseri ATCC
           BAA-895]
 gi|157084305|gb|ABV13983.1| hypothetical protein CKO_02877 [Citrobacter koseri ATCC BAA-895]
          Length = 261

 Score =  166 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 44/261 (16%), Positives = 93/261 (35%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  I      A + +++ +++N++N +T GF+  +  F+++    +           
Sbjct: 1   MNPALWISKTGLAAQDAKMTAISNNLANVNTTGFKRDRAMFADLFYQNQRTPGGQLDQNN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V          VGS  +TG   D A+ G  +F +E+    I  TR G F
Sbjct: 61  IAPTGIQYGTGVKIVGTQKEFTVGSIQNTGQTFDVAITGQGFFQVETADGDIAYTRAGNF 120

Query: 107 KVTDDGSLVSASGKY-PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           + T DG L +A G            ++  Q  +   +            +  + L +   
Sbjct: 121 QKTPDGVLTNAQGLPLVPQIELPENVKDLQIGKDGTITATVAGETDPVELGQLTLVNFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +            +      +   +++G LE SN   + EM  MI + + +
Sbjct: 181 PAGLEAIGGNLYRETAASGEAVEGVPGEDALGQLEQGSLEGSNVQVVEEMVDMITVQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
                ++   +  +    +++
Sbjct: 241 EMNAKMVSAADDMLKFVTQSM 261


>gi|82544456|ref|YP_408403.1| flagellar basal body rod protein FlgG [Shigella boydii Sb227]
 gi|81245867|gb|ABB66575.1| cell-distal portion of basal-body rod [Shigella boydii Sb227]
 gi|320186975|gb|EFW61688.1| Flagellar basal-body rod protein FlgG [Shigella flexneri CDC
           796-83]
 gi|332094081|gb|EGI99133.1| flagellar basal-body rod protein FlgG [Shigella boydii 3594-74]
          Length = 260

 Score =  166 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 87/259 (33%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M +S  I      A +  +  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+   T    D A++G  +F +  P      TRDG F
Sbjct: 61  TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGSSAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V  +G LV+A G      +      +         V    +       +  + L +   
Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +  +         + +        + +G++E SN N   E+  MI + + +
Sbjct: 181 DTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +   ++   +  +
Sbjct: 241 EINSKAVSTTDQMQQKLTQ 259


>gi|332533173|ref|ZP_08409042.1| flagellar basal-body rod protein FlgG [Pseudoalteromonas
           haloplanktis ANT/505]
 gi|332037455|gb|EGI73909.1| flagellar basal-body rod protein FlgG [Pseudoalteromonas
           haloplanktis ANT/505]
          Length = 262

 Score =  166 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 41/262 (15%), Positives = 93/262 (35%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +  I      A +  +S +++N++N  TVG++  +  F +++    N    +     
Sbjct: 1   MNPALWISKTGLDAQQTDISVISNNLANASTVGYKKSRAIFEDLLYQNINQPGGRSSQDT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    +             G+ ++T   LD+ + G+ +F +  P   I  +R+G+F
Sbjct: 61  EMPSGLMLGAGAKVVANQKEFTQGNMLTTENSLDWMISGEGFFEVLQPDGNIAYSRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI--SQKGKVIATMGLYSVD 164
               DG +V++   Y +    +VP          +      +       VI  + +    
Sbjct: 121 TTDGDGRIVTSGAGYVIQPEMNVPDDAQSITVSQDGEVSVRVAGQADNVVIGQLTISDFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +  +           +       ++ +G LE SN N   E+  +I   + 
Sbjct: 181 NPSGLEPIGQNLYTETAVSGAPVQGNPGVEGLGSIIQGSLETSNVNVTEELVNLIETQRI 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   ++ M    + +
Sbjct: 241 YEMNSKVISAVDEMMSYINQQL 262


>gi|226321475|ref|ZP_03797002.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           Bol26]
 gi|226233271|gb|EEH32023.1| flagellar hook-basal body complex protein [Borrelia burgdorferi
           Bol26]
          Length = 282

 Score =  166 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 48/280 (17%), Positives = 105/280 (37%), Gaps = 38/280 (13%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51
           M        +  +A  ++L TV++N++N D +G++        F E++    ND      
Sbjct: 1   MVRGIYTAASGMMAERRKLDTVSNNLANIDLIGYKKDLSIQKAFPEMLIRRLNDDGLYKF 60

Query: 52  ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101
                     + +  + V   + Y   E G   +TG  LD AL    +F +++  G   T
Sbjct: 61  PKGHLETAPVVGKIGTGVEENEIYTVFEQGPLKTTGNPLDLALTDQGFFVIQTSDGERYT 120

Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI------------- 148
           R+G F +  +G LV+ SG   + +   + ++                             
Sbjct: 121 RNGSFTIGKEGILVTKSGFPVLGEKGYIYLKKNNFKITHQGQVFHNSNFESDPKRLVSEY 180

Query: 149 ---SQKGKVIATMGLYSVDMSQGFVRRENSGIS---PNIPPTPLEDLSGVTVKRGFLEDS 202
               +  +++ T+ + + +  +   ++ NS       +     ++      ++   LE S
Sbjct: 181 ENSWENYELLDTIRIVNFENPRFLKKQGNSLWIDTKTSGKAQEIDISLRPKIETETLEAS 240

Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           N N++ EM  MI + + + +    +   +  + + I  I 
Sbjct: 241 NVNAVKEMVLMIEINRAYEANQKTLQTEDSLLGKLINEIG 280


>gi|116694221|ref|YP_728432.1| flagellar basal body rod protein FlgG [Ralstonia eutropha H16]
 gi|113528720|emb|CAJ95067.1| flagellar basal body rod protein [Ralstonia eutropha H16]
          Length = 261

 Score =  166 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 86/259 (33%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A + ++  +++N++N  T GF+  +  F E++               
Sbjct: 1   MIRSLWIAKTGLDAQQTQMDVISNNLANVSTNGFKRGRAVFEELMYQTIRQPGALSSDQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+   TG   D A+ G  +F +  P      TRDG F
Sbjct: 61  TLPSGMQLGTGVRPVATERIHTQGNPQQTGNAKDVAILGQGFFQVALPDGTTAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V  +G LV++SG      +      +         V      S     +  + L +   
Sbjct: 121 QVDQNGQLVTSSGFVIQPAITIPANTLSMTIARDGTVSVTQPGSSANVQVGQLQLATFMN 180

Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +                       V++ ++E SN N + E+  MI   + +
Sbjct: 181 PAGLESMGENLYVQTDASGAPNTTVPGLNGAGVVQQNYVEASNVNVVEELVSMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ +    +
Sbjct: 241 EINSKAVQASDQMLQRLSQ 259


>gi|310641552|ref|YP_003946310.1| fagellar hook-basal body protein [Paenibacillus polymyxa SC2]
 gi|309246502|gb|ADO56069.1| Fagellar hook-basal body protein [Paenibacillus polymyxa SC2]
          Length = 272

 Score =  166 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 51/269 (18%), Positives = 99/269 (36%), Gaps = 30/269 (11%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++     + +L  + +N++N +T GF++ +V F +++    +          
Sbjct: 1   MLRSMYSGVSGMKGFQTKLDVIGNNIANVNTTGFKSSRVMFKDILSQTSSGASASGEETA 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI---ILTRDGR 105
                Q                GS ++T    D  L GD +F ++         LTR G 
Sbjct: 61  GSNAKQIGLGSTVSSIDTLHLPGSAMTTNNPTDLRLNGDGFFLVKMNADQEAPYLTRAGD 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-----SQKGKVIATMGL 160
           F +  +  LV++ G +       VPI +      F++ + G I     S +      +G+
Sbjct: 121 FHIDGNRHLVTSDGFFVADSGGGVPITLADDVTAFSISQDGTIVQTLASGETDNATKIGV 180

Query: 161 YSVDMSQGFVRRENSGISPNIP----------PTPLEDLSGVTVKRGFLEDSNANSMYEM 210
             V   +G  +   S     +                D     +  G LE SN +   E 
Sbjct: 181 TKVINPEGLEKIGGSLYRATVNSGNEGEITAMEANSADDGTGAIISGQLEMSNVDLTGEF 240

Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +MI   + F + + +I  +++ + E + 
Sbjct: 241 TEMIVAQRGFQANSRIITTSDEVLQEVVN 269


>gi|260886211|ref|ZP_05897474.1| flagellar basal-body rod protein FlgG [Selenomonas sputigena ATCC
           35185]
 gi|330839793|ref|YP_004414373.1| flagellar basal-body rod protein FlgG [Selenomonas sputigena ATCC
           35185]
 gi|260863930|gb|EEX78430.1| flagellar basal-body rod protein FlgG [Selenomonas sputigena ATCC
           35185]
 gi|329747557|gb|AEC00914.1| flagellar basal-body rod protein FlgG [Selenomonas sputigena ATCC
           35185]
          Length = 263

 Score =  166 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 51/263 (19%), Positives = 96/263 (36%), Gaps = 24/263 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +     +   A +  +  VA N++N +T G + ++ +F ++V         +     
Sbjct: 1   MMRALWSAASGMKAQQDNMDVVAHNIANVNTFGSKKVRAEFQDLVYQNLRAAGAQSGADS 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                        +         G+  S+G   D A++G+ +F +E P   I  TRDG F
Sbjct: 61  QYPTGLAIGLGTRTAATQRIFTQGNLQSSGNPTDVAIQGEGFFRIEMPDGTIAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV--IATMGLYSVD 164
           K+  +  LV+  G      +            I   G+       G V  +  + L    
Sbjct: 121 KLDQNRRLVTTDGYPLADGITLDANAPSDSIVIAGDGQVSCTPAGGNVTAVGQITLSRFV 180

Query: 165 MSQGF------VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
              G       + +E       I   P E+ +  T+ +G +E SN   + EM  MI   +
Sbjct: 181 NPAGLFAIGKNLFKETDASGNAIDSNPGEEGA-GTLTQGVVEMSNIQIVEEMVNMIVAQR 239

Query: 219 KFNSITTLIDENEKSMLEAIRNI 241
            + S +  I  ++  + E   ++
Sbjct: 240 AYESNSKAITTSDSML-EIANSL 261


>gi|167034941|ref|YP_001670172.1| flagellar basal body rod protein FlgG [Pseudomonas putida GB-1]
 gi|166861429|gb|ABY99836.1| flagellar basal-body rod protein FlgG [Pseudomonas putida GB-1]
          Length = 261

 Score =  166 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 48/261 (18%), Positives = 98/261 (37%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  +      A +  L+ +++N++N  T GF+  + +F++++  IK           
Sbjct: 1   MLPALWVAKTGLSAQDTNLTVISNNLANVSTTGFKRDRAEFADLLYQIKRQPGAQSTQDS 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                 Q  + V       S   GS  +T   LD A+ G  +F +  P G +  TRDG F
Sbjct: 61  ELPSGLQVGTGVRIVGTQKSFVAGSLQTTENPLDMAVNGRGFFQILQPDGTVSYTRDGTF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
            +  DG +V+A+G      +      Q     +   V      +   +VI  +       
Sbjct: 121 HLNSDGQIVTANGYALEPAVVVPNDAQTFTVGQDGTVSITTAGNPAAQVIGNIQTADFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++           +          T ++  LE+SN +++ E+  MI   + +
Sbjct: 181 PAGLQAIGDNLFLETAASGAPQVGTPGLNGFGTTQQQTLENSNVSTVEELVNMITTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
              + +I   ++ +    + +
Sbjct: 241 EMNSKVISTADQMLSFVTQQL 261


>gi|150395485|ref|YP_001325952.1| flagellar basal body rod protein FlgG [Sinorhizobium medicae
           WSM419]
 gi|150027000|gb|ABR59117.1| flagellar basal-body rod protein FlgG [Sinorhizobium medicae
           WSM419]
          Length = 262

 Score =  166 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 44/262 (16%), Positives = 91/262 (34%), Gaps = 21/262 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55
             + +I      A +  L  +A+N++N +T G++  + +FS+++   +            
Sbjct: 1   MKALSIAATGMNAQQLNLEVIANNIANINTTGYKRARAEFSDLLYQTERAQGVPNRSNQA 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                      V +         GS ++TG + D AL G  WF +E+P    + TR G F
Sbjct: 61  IVPEGAIIGLGVQTSAVRNLHIQGSLVNTGNDYDLALVGRGWFQIETPDGETVYTRSGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
                G LV+  G   V  +                V  +     + + I  + + +   
Sbjct: 121 NTNATGQLVTIDGYTVVPGVTVPQDATEIVFTSSGQVMVRIGNDTELQEIGQLTVANFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +                       +K+ +LE SN + + E+  +I   + +
Sbjct: 181 EAGLEPMGENLFRQTPASGDAIVGTPADPGFAQIKQNYLESSNVDPVKEITDLISAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNIA 242
              + +I   ++      +N+ 
Sbjct: 241 EMNSKIIQAADEMAATVSKNLR 262


>gi|33601543|ref|NP_889103.1| flagellar basal body rod protein FlgG [Bordetella bronchiseptica
           RB50]
 gi|33575979|emb|CAE33058.1| flagellar basal-body rod protein [Bordetella bronchiseptica RB50]
          Length = 261

 Score =  166 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 40/260 (15%), Positives = 90/260 (34%), Gaps = 21/260 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  +        +  +  +++N++N  T GF+  +  F +++               
Sbjct: 1   MMRSLWVAKTGLEGQQTSMDVISNNLANVQTNGFKRGRAVFQDLMYQTLRQPGAQVGDAN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           G+  +TG E+D A++G  +  +E P G    TRDG  
Sbjct: 61  QLPSGLQLGTGVQVAATQRVFSQGNMNNTGGEMDIAIQGRGFLQVELPDGTQAYTRDGSL 120

Query: 107 KVTDDGSLVSASGK--YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
           +V  +G L +A G    P +++    + +    +      +   +     I  + + +  
Sbjct: 121 QVDQNGQLTTAGGYVIQPPINVPDNALSLTIGKDGTVSVTQPGAAGTNVQIGQLQVATFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +         P             + + ++E SN N   E+  MI   + 
Sbjct: 181 NPTGLQSVGENLYLETDSSGPANLLQPGIDGAGQILQQYVETSNVNVAEELVNMITTQRA 240

Query: 220 FNSITTLIDENEKSMLEAIR 239
           +   +  +  +++ +    +
Sbjct: 241 YEMNSKAVKTSDEMLARLTQ 260


>gi|144897832|emb|CAM74696.1| flagellar basal body distal rod protein; FlgG [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 261

 Score =  166 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 51/261 (19%), Positives = 101/261 (38%), Gaps = 22/261 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             S NI     LA +  +  +++N++N +T  +   + +FS+++      +         
Sbjct: 1   MRSLNIAATGMLAQQTNVEVISNNIANMNTTAYTKRRPEFSDLLYQNLRRVGAASSDAGT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q    V +   Y   E GS  ST   LD A++G  +  +  P      TRDG F
Sbjct: 61  IVPTGVQLGLGVKTTAVYRITEQGSVQSTDNTLDVAIQGKGYLQIRLPSGDTAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           ++++ G +V+  G   +  +      +         V  K + S    V+  + L +   
Sbjct: 121 QLSEAGQIVTHEGYTVLPGITVPNNAVGISINASGQVMVKVDGSIDQTVVGQLQLANFAN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLS-----GVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   R ++          +   +       T+ +GFLE SN N + E+  +I   + +
Sbjct: 181 EAGLEARGDNLFLETPASGGVLAGNPGSPGYGTLLQGFLETSNVNVVAEVTNLISAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
              + +I  +++ M   I  +
Sbjct: 241 EMNSKVIQTSDEMM-STINQL 260


>gi|26991074|ref|NP_746499.1| flagellar basal body rod protein FlgG [Pseudomonas putida KT2440]
 gi|24986108|gb|AAN69963.1|AE016634_12 flagellar basal-body rod protein FlgG [Pseudomonas putida KT2440]
          Length = 261

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 47/261 (18%), Positives = 96/261 (36%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  +      A +  L+ +++N++N  T GF+  + +F++++  IK           
Sbjct: 1   MLPALWVAKTGLSAQDTNLTVISNNLANVSTTGFKRDRAEFADLLYQIKRQPGAQSTQDS 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                 Q  + V       S   GS  +T   LD A+ G  +F +  P G +  TRDG F
Sbjct: 61  ELPSGLQVGTGVRIVGTQKSFVAGSLQTTDNPLDMAVNGRGFFQILQPDGTVSYTRDGTF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
            +  DG +V+ +G      +      Q     +   V      +   +VI  +       
Sbjct: 121 HLNSDGQIVTDNGYALEPAIVVPNDAQTFTVGQDGTVSITTAGNPAAQVIGNIQTADFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++           +          T  +  LE+SN +++ E+  MI   + +
Sbjct: 181 PAGLQAIGDNLFLETAASGAPQVGTPGLNGFGTTLQQTLENSNVSTVEELVNMITTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
              + +I   ++ +    + +
Sbjct: 241 EMNSKVISTADQMLSFVTQQL 261


>gi|317406199|gb|EFV86448.1| flagellar basal-body rod protein FlgG [Achromobacter xylosoxidans
           C54]
          Length = 261

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 42/260 (16%), Positives = 86/260 (33%), Gaps = 21/260 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I        +  +  +++N++N  T GF+  +  F +++               
Sbjct: 1   MMRSLWIAKTGLEGQQTSMDVISNNLANVATNGFKRGRAVFQDLMYQTLRQPGAQVGDAT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  +             G   +TG ELD A+ G  +  +E P G    TRDG  
Sbjct: 61  QLPSGLQLGTGARVAATERIHTTGGLNNTGGELDVAINGRGFLQVELPDGTQAYTRDGAL 120

Query: 107 KVTDDGSLVSASGK--YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
           +   +G L + SG    P +++    + I    +      +   +     I  + + +  
Sbjct: 121 QRDQNGQLTTVSGYVIQPPMNVPDNALSISIGKDGIVSVTQPGAAGVNVQIGQLQIATFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +         P            T  + ++E SN N   E+  MI   + 
Sbjct: 181 NPTGLQSVGENLYLETDASGPANLLQPGVDGAGTFMQNYVETSNVNVAEELVNMITTQRA 240

Query: 220 FNSITTLIDENEKSMLEAIR 239
           +   +  +  +++ +    +
Sbjct: 241 YEMNSKAVKTSDEMLARLTQ 260


>gi|291276427|ref|YP_003516199.1| flagellar basal-body rod protein [Helicobacter mustelae 12198]
 gi|290963621|emb|CBG39453.1| flagellar basal-body rod protein [Helicobacter mustelae 12198]
          Length = 262

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 86/256 (33%), Gaps = 20/256 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S        L  + ++ T ++N++N +TVG++  + +F+++                
Sbjct: 1   MMRSLYSATTGMLGQQLQIDTTSNNIANVNTVGYKRQRAEFNDLFYQNLQYAGTATSETT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                      V  G        GS   T   LD A+ G  +F +  P      TR G F
Sbjct: 61  LSPTGIEVGLGVRPGAIAKMFSQGSPKETENNLDMAITGKGFFQVRLPDGTTAYTRSGNF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG-KVIATMGLYSVDM 165
           K+ D+G++V++ G   +  +                    + +  G   I  + L     
Sbjct: 121 KLDDNGNVVTSEGYALIPQITVPQDATQINIGNDGTVSVVQGNNGGSNTIGQIELADFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++                       +K+GFLE SN   + EM  +I   + +
Sbjct: 181 PAGLHSLGDNLYLNTSASGAPITGVAGTNGMGQIKQGFLELSNVRLVEEMTDLITGQRAY 240

Query: 221 NSITTLIDENEKSMLE 236
            + +  I   +  +  
Sbjct: 241 EANSKSIQTADAMLQT 256


>gi|304438315|ref|ZP_07398256.1| flagellar basal-body rod protein FlgG [Selenomonas sp. oral taxon
           149 str. 67H29BP]
 gi|304368681|gb|EFM22365.1| flagellar basal-body rod protein FlgG [Selenomonas sp. oral taxon
           149 str. 67H29BP]
          Length = 264

 Score =  165 bits (418), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 42/263 (15%), Positives = 88/263 (33%), Gaps = 23/263 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +     +   A + ++  VA N++N +T G + ++ +F ++V     +         
Sbjct: 1   MMRALWSAASGMKAQQSQMDVVAHNIANVNTYGGKKVRAEFQDLVYQTLREAGARNGADS 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q                G+  +T    D  ++G+ +F +  P      TRDG +
Sbjct: 61  QYPTALQIGLGTRLAATQRVFTQGALQTTDNPTDIGIQGEGFFRVTMPDGTTAYTRDGTW 120

Query: 107 KVTDDGSLVSASGKYPVLD---MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
           K+  D  +V+  G           + P+          V  +     + +    + L   
Sbjct: 121 KLDSDRRMVTTDGYLLADGITIGQNAPLDSITISGDGRVSYREAGQNQQQEAGQITLARF 180

Query: 164 DMSQGFVRRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
               G      +    +        +   +    T+ +G LE SN   + EM  MI   +
Sbjct: 181 VNPAGLTSVGKNLFVVSDASGEAIESNPGEDGAGTLTQGTLEMSNVQIVEEMVNMIVSQR 240

Query: 219 KFNSITTLIDENEKSMLEAIRNI 241
            + S +  I  ++  + E    +
Sbjct: 241 AYESNSKAITTSDSML-EIANQL 262


>gi|268680164|ref|YP_003304595.1| flagellar basal-body rod protein FlgG [Sulfurospirillum deleyianum
           DSM 6946]
 gi|268618195|gb|ACZ12560.1| flagellar basal-body rod protein FlgG [Sulfurospirillum deleyianum
           DSM 6946]
          Length = 262

 Score =  165 bits (418), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 46/256 (17%), Positives = 101/256 (39%), Gaps = 20/256 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S        +A + ++ T ++N+SN +T+G++  + +F++++               
Sbjct: 1   MIRSLYTAATGMIAQQTQIDTTSNNISNVNTIGYKKQRAEFADLMYQTMTYAGTSTSATS 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                 +    V           G+F  TG  LD A+ G+ +F ++ P G    TR+G F
Sbjct: 61  TSPTGIEVGLGVRPTAIAKQFTQGNFKETGNSLDVAITGNGFFQIQLPDGTTGYTRNGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           K+  +GS+V++ G   + ++            +   V        +   I  + L +   
Sbjct: 121 KLDSEGSVVNSDGYRLLPELTIPEDATQITIGVNGVVSVLQAGQTETNEIGQIELANFIN 180

Query: 166 SQGFVR-RENSGISPNIPPTPLED----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     +N+ I+ +    P+            ++ F+E SN   + EM  +I   + +
Sbjct: 181 PAGLHSLGDNNYINTSASGDPIVSEPGLNGLGQTRQQFVEMSNVQLVEEMTDLITGQRAY 240

Query: 221 NSITTLIDENEKSMLE 236
            + +  I  +++ +  
Sbjct: 241 EANSKAITTSDEMLQT 256


>gi|312884832|ref|ZP_07744524.1| flagellar basal body rod protein FlgG [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309367484|gb|EFP95044.1| flagellar basal body rod protein FlgG [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 261

 Score =  165 bits (418), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 44/261 (16%), Positives = 98/261 (37%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M ++  +      A + +++ +++N++N +TVGF+  +V F ++   I+           
Sbjct: 1   MHSALWVSKTGMAAQDTKMTAISNNLANVNTVGFKRDRVVFEDLFYTIQRQPGAQVDEVN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106
                 Q  S V           G+  +T  +LD A+ G  +F +E+    I+ TR+G+F
Sbjct: 61  ELPSGVQLGSGVRVVGTQKVFTQGNTQNTNQDLDLAVMGKGFFQIENSDGQIMYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           +V  +G +V++ G      +      +     +   V     I    + +  + L     
Sbjct: 121 QVNSEGLMVNSQGLPLEPQIQIPDDALSISVGVDGTVTTTSAIDPTPQQVGQITLARFIN 180

Query: 166 SQGFVRRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +                 +    ++K+  LE SN   + EM  MI   + +
Sbjct: 181 PAGLEAVGGNLFRQTEASGLAEELIASEDGVGSIKQRALEGSNVQVVEEMVDMITTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
                ++   +  +    +++
Sbjct: 241 EMNAKVVSAADDMLKFVAQSV 261


>gi|325274797|ref|ZP_08140825.1| flagellar basal body rod protein FlgG [Pseudomonas sp. TJI-51]
 gi|324100065|gb|EGB97883.1| flagellar basal body rod protein FlgG [Pseudomonas sp. TJI-51]
          Length = 261

 Score =  165 bits (418), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 47/261 (18%), Positives = 97/261 (37%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  +      A +  L+ +++N++N  T GF+  + +F++++  +K           
Sbjct: 1   MLPALWVAKTGLSAQDTNLTVISNNLANVSTTGFKRDRAEFADLLYQVKRQPGAQSTQDS 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                 Q  + V       S   GS  +T   LD A+ G  +F +  P G +  TRDG F
Sbjct: 61  ELPSGLQVGTGVRIVGTQKSFVAGSLQTTENPLDMAVNGRGFFQILQPDGTVSYTRDGTF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
            +  DG +V+A+G      +      Q         V      +   +VI  +       
Sbjct: 121 HLNSDGQIVTANGYALEPAIVVPNDAQTFTVGTDGTVSITTAGNPAAQVIGNIQTADFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++           +          T ++  LE+SN +++ E+  MI   + +
Sbjct: 181 PAGLQAIGDNLFLETAASGAPQVGTPGLNGFGTTQQQTLENSNVSTVEELVNMITTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
              + +I   ++ +    + +
Sbjct: 241 EMNSKVISTADQMLSFVTQQL 261


>gi|291613040|ref|YP_003523197.1| flagellar basal-body rod protein FlgG [Sideroxydans lithotrophicus
           ES-1]
 gi|291583152|gb|ADE10810.1| flagellar basal-body rod protein FlgG [Sideroxydans lithotrophicus
           ES-1]
          Length = 260

 Score =  165 bits (418), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 41/259 (15%), Positives = 89/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A + ++  +++N++N  T GF+  +  F +++               
Sbjct: 1   MIRSLWISKTGLEAQQTQMDVISNNLANVSTNGFKRSRAVFEDLLYQNLRQPGAQSSQQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+   T  +LD A++G  +F +  P      TRDG F
Sbjct: 61  QIPSGLQIGTGVRPVATERIHTQGNLQQTSNQLDVAIQGAGFFQVLMPDGTTAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +    G +V+++G      +            +   V      +     + +M L +   
Sbjct: 121 QTDSQGQIVTSNGFVVQPAITIPANATTVTIGQDGVVTVTQPGATAPVQVGSMQLATFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +                      ++ +G++E SN N + E+  MI   + +
Sbjct: 181 PTGLESMGQNMYLETASSGTPSTNVPGTNGTGSISQGYVETSNVNVVEELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  I  +++ + +  +
Sbjct: 241 EINSKAITVSDQMLQKLAQ 259


>gi|119469952|ref|ZP_01612757.1| flagellar biosynthesis; cell-distal portion of basal-body rod
           [Alteromonadales bacterium TW-7]
 gi|119446662|gb|EAW27935.1| flagellar biosynthesis; cell-distal portion of basal-body rod
           [Alteromonadales bacterium TW-7]
          Length = 262

 Score =  165 bits (418), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 44/262 (16%), Positives = 94/262 (35%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +  I      A +  +S +++N++N  TVG++  +  F +++    N    +     
Sbjct: 1   MNPALWISKTGLDAQQTDISVISNNLANASTVGYKKSRAIFEDLLYQNINQPGGRSSQDT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    +         +   G+ ++T   LD+ + G  +F +  P   I  +R+G+F
Sbjct: 61  EMPSGLMLGAGAKVVANQKNFSQGNMLTTENSLDWMISGPGFFEVLQPDGNIAYSRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFN--VGEKGEISQKGKVIATMGLYSVD 164
               DG +V++   Y V    +VP          +  V  +        VI  + +    
Sbjct: 121 TTDGDGRIVTSGSGYVVQPEMNVPDDAQSITISQDGEVSVRISGQADNVVIGQLTISDFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +  +           +       T+ +G LE SN N   E+  +I   + 
Sbjct: 181 NPSGLEPVGQNLYTETAVSGAPVQGNPGVEGLGTIIQGSLETSNVNVTEELVNLIETQRI 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   ++ M    + +
Sbjct: 241 YEMNSKVISAVDEMMSYINQQL 262


>gi|89098635|ref|ZP_01171517.1| flagellar hook protein [Bacillus sp. NRRL B-14911]
 gi|89086597|gb|EAR65716.1| flagellar hook protein [Bacillus sp. NRRL B-14911]
          Length = 270

 Score =  165 bits (418), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 50/261 (19%), Positives = 98/261 (37%), Gaps = 22/261 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50
           M  S   G++     + +L  + +N++N +T G++  +V F ++V    +          
Sbjct: 7   MLRSMYSGISGMKNFQTKLDVIGNNIANVNTFGYKKGRVTFKDMVSQTVSGATAGGAGVG 66

Query: 51  --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
             +  Q                GS  +TG  LD  ++GD +F ++       TR G F  
Sbjct: 67  GINPKQVGLGSQMSSIDTVDTQGSLQTTGRILDIGIQGDGYFRVQKGTNSYYTRAGNFYF 126

Query: 109 TDDGSLVSASGKYPVLDMASVPI-----QIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
            + G++V+ASG+  +    +        QI       +               T+GL   
Sbjct: 127 DNSGNMVTASGEQVLNSNGTAINIPNISQIENLSIGADGSISFIQGGTSTTGPTIGLARF 186

Query: 164 DMSQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
             + G  +  N+         P ++         ++  G LE SN +   E  +MI   +
Sbjct: 187 SNNGGLEKVGNNLYKSTANSGPAQNVLPGTSGAGSLVSGSLEMSNVDLSEEFTEMIVAQR 246

Query: 219 KFNSITTLIDENEKSMLEAIR 239
            F + T +I  +++ + E + 
Sbjct: 247 GFQANTRIITTSDEILQELVN 267


>gi|37525843|ref|NP_929187.1| flagellar basal-body rod protein FlgG (Distal rod protein)
           [Photorhabdus luminescens subsp. laumondii TTO1]
 gi|36785272|emb|CAE14213.1| Flagellar basal-body rod protein FlgG (Distal rod protein)
           [Photorhabdus luminescens subsp. laumondii TTO1]
          Length = 260

 Score =  165 bits (418), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 83/259 (32%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A +  +  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAIFEDLLYQNIRQPGAMSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           G+   T    + A+ G  +F ++ P G    TRDG F
Sbjct: 61  RLPSGLQIGTGVRPVATERIHSQGNLSETNNSHNVAIRGKGFFQVQLPDGTSAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           +   +G L +A+G      +                V  K +     + +    L +   
Sbjct: 121 QEDQNGQLTTANGFLIFPTITIPDNATDLTISSDGIVSVKVQGQSVPQQVGQFTLTTFIN 180

Query: 166 SQGFVRRENSGISPNIP-----PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +                       ++  ++E SN N   E+  MI   + +
Sbjct: 181 DSGLESIGENLYVETSSSGVPIENTPGINGAGLLQHKYVETSNVNIAEELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ + +  +
Sbjct: 241 EVNSKAVSTSDQMLQKLTQ 259


>gi|312794500|ref|YP_004027423.1| fagellar hook-basal body protein [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312876698|ref|ZP_07736678.1| fagellar hook-basal body protein [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|311796538|gb|EFR12887.1| fagellar hook-basal body protein [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|312181640|gb|ADQ41810.1| fagellar hook-basal body protein [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 255

 Score =  165 bits (418), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 52/258 (20%), Positives = 102/258 (39%), Gaps = 21/258 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS-----------EVVGAIK 49
           M        +  +  ++ +   A+N++N  T GF+    +             + V +  
Sbjct: 1   MIRGIYTSASGMILNQKLMDITANNVANVSTTGFKRDVAQVESFRNMLVYRIYDKVSSPD 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP-----RGIILTRDG 104
           N I          +       G +I T   L+ A+ G+ +FA+E P     + I+ TR+G
Sbjct: 61  NAIGYMSLGSDVSRIVSDFSQGLYIKTDEPLNLAIRGNGFFAIEVPGSQGAQQILYTRNG 120

Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
            F +   G LV+  G Y +         + Q      + E+G I Q G+ +  + +    
Sbjct: 121 AFTLNSRGELVTLDGFYVLG---QNGRIVLQNGGQVRIDEQGNIYQDGRFVDRLRIVDFQ 177

Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224
             Q   +  N+    +      +      + +G+LE SN NS+ EM  MI + + + +  
Sbjct: 178 DKQLLRKLGNNLFEADAG--AQQIPFSGRILQGYLEGSNVNSVQEMVDMISVLRAYEANQ 235

Query: 225 TLIDENEKSMLEAIRNIA 242
                 ++++ +A+  IA
Sbjct: 236 KAFTIQDETLQKAVNEIA 253


>gi|104782840|ref|YP_609338.1| flagellar basal body rod protein FlgG [Pseudomonas entomophila L48]
 gi|95111827|emb|CAK16551.1| Flagellar basal-body rod protein flgG [Pseudomonas entomophila L48]
          Length = 261

 Score =  165 bits (418), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 48/261 (18%), Positives = 95/261 (36%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  +      A +  L+ +++N++N  T GF+  + +F +++  IK           
Sbjct: 1   MLPALWVAKTGLSAQDTNLTVISNNLANVSTTGFKRDRAEFQDLLYQIKRQPGAQSTQDS 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                 Q  + V       + + G   +T   LD A+ G  +F +  P G +  TRDG F
Sbjct: 61  ELPSGLQVGTGVRVVGTQKNFQTGGLQNTENPLDMAINGRGFFQILQPDGTVSYTRDGTF 120

Query: 107 KVTDDGSLVSASGKYPVLD-MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
            +  DG +V+A G       +     Q     +   V      +   +VI  +       
Sbjct: 121 HLNSDGQIVNADGFALEPAIVVPPEAQTFTVGQDGTVSITTAGNPAAQVIGNLQTADFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     N+           +          T  +  LE+SN +++ E+  MI   + +
Sbjct: 181 PAGLQAIGNNLFLETAASGAPQIGTPGLNGFGTSLQKTLENSNVSTVEELVNMITTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
              + +I   +K +    + +
Sbjct: 241 EMNSKVISAADKMLSFVTQQL 261


>gi|331007439|ref|ZP_08330616.1| Flagellar basal-body rod protein flgG [gamma proteobacterium
           IMCC1989]
 gi|330418746|gb|EGG93235.1| Flagellar basal-body rod protein flgG [gamma proteobacterium
           IMCC1989]
          Length = 261

 Score =  165 bits (418), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 98/261 (37%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  +      A +++L+++++N++N  T+GF+  +V F +++  I+           
Sbjct: 1   MNPALYVSKTGLSAQDRQLTSISNNLANASTIGFKRDRVNFEDLLYQIQRQPGGQSSQNT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           GS   T   LD A+    +F ++ P      TR+G+F
Sbjct: 61  QLPSGLQLGTGVRVVATQKQFTGGSLQVTEQPLDLAINNRGFFQIQMPSGETAYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
            +  +G +V+ASG      ++           +   V          + +  + +     
Sbjct: 121 HLNSNGDIVNASGFLLEPSISIPENTNNITISQDGIVSASILGEATPQELGQITITDFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +  +        +          ++ +G LE+SN + + EM  MI   + +
Sbjct: 181 PAGLQALGGNVFAQTAASGDPQTGTAGESGLGSIIQGSLENSNVDIVEEMVNMITTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
              + ++   ++ +    +N+
Sbjct: 241 EMNSKVVSTADQMLQFISQNL 261


>gi|183598619|ref|ZP_02960112.1| hypothetical protein PROSTU_02019 [Providencia stuartii ATCC 25827]
 gi|188020798|gb|EDU58838.1| hypothetical protein PROSTU_02019 [Providencia stuartii ATCC 25827]
          Length = 260

 Score =  165 bits (418), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 84/259 (32%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I        +  L  +++N++N  T GF+  +  F +++               
Sbjct: 1   MIRSLWIAKTGLDTQQTNLDVISNNLANVSTNGFKRQRAVFEDLLYQNIRQPGAMSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  +             G+   TG   D A++G  +  ++ P G    TRDG  
Sbjct: 61  SLPSGLQLGTGSRPVATMRIHSQGALNKTGNTTDIAIKGQGFLHVQLPDGTDAYTRDGAL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +   DG LV++SG   V  +                V        + + I  + L +   
Sbjct: 121 QPNQDGQLVTSSGYQIVPAITIPDNANSLTIARDGTVSITVYGDNQPQQIGQITLTTFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +            + +  T     + +  LE SN N   E+  MI   + +
Sbjct: 181 DAGLESMGENLYMETASSGAPNESAPGTNGAGLLYQHMLETSNVNVAEELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ +    +
Sbjct: 241 EINSKAVSASDQMLQRLTQ 259


>gi|261341492|ref|ZP_05969350.1| flagellar basal-body rod protein FlgG [Enterobacter cancerogenus
           ATCC 35316]
 gi|288316288|gb|EFC55226.1| flagellar basal-body rod protein FlgG [Enterobacter cancerogenus
           ATCC 35316]
          Length = 261

 Score =  165 bits (418), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 45/261 (17%), Positives = 92/261 (35%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  I      A + ++S +++N++N +T GF+  +V F+++    +           
Sbjct: 1   MNPALWISKTGLAAQDAKMSAISNNLANVNTTGFKRDRVMFADLFYQNQRTPGGQLDQNN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRF 106
                 Q  + V           G+  +TG +LD A+ G  +F    S   I  TR G F
Sbjct: 61  TSPTGIQFGTGVKILGTQKEFSTGNIQNTGQKLDVAITGQGFFQVETSDGDIAYTRAGNF 120

Query: 107 KVTDDGSLVSASGKY-PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +   DG L +A G            ++  Q  +   V            +  + L +   
Sbjct: 121 QKNPDGMLTNAQGLPLVPQIELPDNVKDIQIGKDGTVTATVAGETDPVELGQITLVNFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +            +      +   +++G LE SN   + EM  MI + + +
Sbjct: 181 PAGLEAIGGNLYRETAASGEAVEGVAGEEAFGQLEQGSLEGSNVQVVEEMVDMITVQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
                ++   +  +    +++
Sbjct: 241 EMNAKMVSAADDMLKFVTQSM 261


>gi|153952075|ref|YP_001398357.1| flagellar basal body rod protein FlgG [Campylobacter jejuni subsp.
           doylei 269.97]
 gi|152939521|gb|ABS44262.1| flagellar basal-body rod protein FlgG [Campylobacter jejuni subsp.
           doylei 269.97]
          Length = 263

 Score =  165 bits (418), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 96/262 (36%), Gaps = 22/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S +      +A + ++   ++N++N +T GF+  + +F++++  +            
Sbjct: 1   MMRSLHTAATGMVAQQMQIDVTSNNIANVNTAGFKKSRAEFADLMYQVMKYAGTSTSATT 60

Query: 56  ---------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGR 105
                    +    +    +  +     ++   LD A+ G+ +F ++ P G I  TR+G+
Sbjct: 61  LSPSGIEVGVGVRPTAVTKVFTKGNLKSTSTDGLDMAIAGNGFFQIQLPDGTIGYTRNGQ 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVD 164
           F   ++G++V++ G   + +M                        Q+   I  + L    
Sbjct: 121 FTKDNEGNIVNSDGYRLLPEMTIPEGATAINVATDGTVSVMLPGEQQETQIGQVELVQFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G     ++                      T++ GF+E SN   + EM  +I   + 
Sbjct: 181 NPAGLHSMGDNLYLETGASGAPVAGIAGQDGLGTIRHGFIELSNVQLVEEMTDLITGQRA 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           + + +  I  ++  +   +  +
Sbjct: 241 YEAGSKAITTSDDMLG-IVNQL 261


>gi|124268252|ref|YP_001022256.1| flagellar basal body and hook protein [Methylibium petroleiphilum
           PM1]
 gi|124261027|gb|ABM96021.1| flagellar basal body and hook protein [Methylibium petroleiphilum
           PM1]
          Length = 260

 Score =  165 bits (418), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 88/259 (33%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A + +L  ++ N++N+ T G++     F +++               
Sbjct: 1   MMRSLWISKTGMEAQQTQLDHISHNLANSATNGYKRSHAVFEDLMYQTIRQPGANSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                 Q      +         GS   +   LD A++G  +F ++ P G    TRDG F
Sbjct: 61  QLPTGLQLGLGTRAVATSRQFSQGSLQQSTNPLDLAVKGQGFFQIQLPDGTTGYTRDGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165
           +V+  G LV+ +G      +                           + +  + L S   
Sbjct: 121 QVSAQGQLVTNNGYVVQPGITIPANAQNVTIGADGNVSVTLPGQAAAQTVGQIQLASFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   R  +  +           +        + +GF+E SN N + E+  MI   + +
Sbjct: 181 PAGLEPRGENLYTETAASGTPNAGAPDSNGLGAIAQGFVEGSNVNVVEELVAMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  I  +++ + +  +
Sbjct: 241 ELNSKAIQTSDQMLQKLAQ 259


>gi|83312594|ref|YP_422858.1| flagellar basal body rod protein FlgG [Magnetospirillum magneticum
           AMB-1]
 gi|82947435|dbj|BAE52299.1| Flagellar basal body rod protein [Magnetospirillum magneticum
           AMB-1]
          Length = 261

 Score =  165 bits (418), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 50/261 (19%), Positives = 104/261 (39%), Gaps = 22/261 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             S NI     LA +  +  +++N++N +T  F   + +F++++      +         
Sbjct: 1   MRSLNIAATGMLAQQTNVEVISNNIANMNTTAFTRRRPEFADLLYQNLRRVGSQSSDTGT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q    V +   Y   E GS  ST   LD A++G  +F ++ P      TRDG F
Sbjct: 61  IVPTGVQLGLGVKTTAVYRITEQGSVQSTDNTLDMAIQGKGYFQIKLPSGETAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           +++ +G++V+  G   +  +      +    +    V  K +   + ++   + L +   
Sbjct: 121 QLSPEGTIVTHEGYQVIPQVTIPSDAVGVTVDSTGQVIVKQDGQVQSQIKGQLTLATFAN 180

Query: 166 SQGFVRRENSG-ISPNIPPTP----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   R  +  +       P           T+ +GFLE SN N + E+  +I   + +
Sbjct: 181 DAGLEARGGNLFMETPASGQPVVQTPGKPGFGTILQGFLETSNVNVVAEVTNLIGAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
              + +I  +++ +   I  +
Sbjct: 241 EMNSKVIQASDEML-STINQM 260


>gi|28900124|ref|NP_799779.1| putative flagellar basal-body rod protein [Vibrio parahaemolyticus
           RIMD 2210633]
 gi|260365774|ref|ZP_05778270.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
           K5030]
 gi|260880696|ref|ZP_05893051.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
           AN-5034]
 gi|260897698|ref|ZP_05906194.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
           Peru-466]
 gi|260899391|ref|ZP_05907786.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
           AQ4037]
 gi|28808407|dbj|BAC61612.1| putative flagellar basal-body rod protein [Vibrio parahaemolyticus
           RIMD 2210633]
 gi|308086222|gb|EFO35917.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
           Peru-466]
 gi|308092230|gb|EFO41925.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
           AN-5034]
 gi|308109302|gb|EFO46842.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
           AQ4037]
 gi|308115005|gb|EFO52545.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
           K5030]
 gi|328470103|gb|EGF41014.1| flagellar basal body rod protein FlgG [Vibrio parahaemolyticus
           10329]
          Length = 261

 Score =  165 bits (418), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 95/255 (37%), Gaps = 20/255 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M ++  +      A + +++ +++N++N +TVGF+  +V F ++  +I+           
Sbjct: 1   MHSALWVSKTGMAAQDTKMTAISNNLANVNTVGFKRDRVVFEDLFYSIQRQPGAQVDQVN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106
                 Q  S V           G+  +T  +LD A+ G  +F +E+    I+ TR+G+F
Sbjct: 61  ELPSGVQLGSGVRVVGTQKVFTQGNTQNTTQDLDLAVMGQGFFQIENSDGQIMYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQI-PQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
            +  +G +V++ G      +                V          + +  + L     
Sbjct: 121 HINSEGLMVNSQGLPLEPQIQIPDNATSFSVGVDGTVTTTTADDPTPQQLGQITLAKFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +         P ++         ++K+G LE SN   + EM  MI   + +
Sbjct: 181 PAGLEAVGGNLFRETEASGPADELIAGADGAGSIKQGALEGSNVQVVEEMVDMITTQRAY 240

Query: 221 NSITTLIDENEKSML 235
                ++   +  + 
Sbjct: 241 EMNAKVVSAADDMLK 255


>gi|103488389|ref|YP_617950.1| flagellar basal body rod protein FlgG [Sphingopyxis alaskensis
           RB2256]
 gi|98978466|gb|ABF54617.1| Flagellar basal-body rod FlgG [Sphingopyxis alaskensis RB2256]
          Length = 261

 Score =  165 bits (418), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 46/257 (17%), Positives = 88/257 (34%), Gaps = 19/257 (7%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK-------- 55
           + ++      A   R+  +A+N++N +T GF+  +  F  +   +               
Sbjct: 5   ALHVARTGLDAQSFRMQVIANNLANVNTTGFKRDRASFETLSYQLMTQAGAPSTAENRYA 64

Query: 56  -----ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVT 109
                 + VA          G+F +TG  LD A++G  +F +E P   I  TR G F   
Sbjct: 65  TGLNLGTGVALNGTARIDTQGTFQTTGNGLDVAIDGAGYFQVELPDGRIGYTRAGNFGRA 124

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169
            DG++V+  GK     +            +               +  + +       G 
Sbjct: 125 PDGTIVTPDGKPLTPAIQIPEDAGNVSIGLDGTVSATAADGTALELGRIEIARFSNPAGL 184

Query: 170 VRRENSGISPNIPPTPLEDLS-----GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224
                + +                    T++ G LE SN N + E+  MI   + +   +
Sbjct: 185 QAIGGNMLVETQASGAPLVGGAGEEGRGTLRGGMLEGSNVNVVEELVDMIETQRAYEVNS 244

Query: 225 TLIDENEKSMLEAIRNI 241
            +I   ++ M  A + +
Sbjct: 245 KMISATDEMMKNASQTL 261


>gi|283953936|ref|ZP_06371465.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni 414]
 gi|283794541|gb|EFC33281.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni 414]
          Length = 262

 Score =  165 bits (418), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 40/261 (15%), Positives = 96/261 (36%), Gaps = 22/261 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55
             S +      +A + ++   ++N++N +T GF+  + +F++++  +             
Sbjct: 1   MRSLHTAATGMVAQQTQIDVTSNNIANVNTAGFKKSRAEFADLMYQVMKYAGTSTSATTL 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                   +    +    +  E     ++   LD A+ G+ +F ++ P G I  TR+G+F
Sbjct: 61  SPSGIEVGVGVRPTAVTKVFTEGNLKSTSTDGLDMAIAGNGFFQIQLPDGTIGYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165
              ++G++V++ G   + +M      I                 Q+   I  + L     
Sbjct: 121 TKDNEGNIVNSDGYRLLPEMTIPEGAIAINVATDGTVSVMLPGEQQETQIGQVELVQFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++                      T++ GF+E SN   + EM  +I   + +
Sbjct: 181 PAGLHSMGDNLYLETGASGAPVAGIAGQDGLGTIRHGFIELSNVQLVEEMTDLITGQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
            + +  I  ++  +   +  +
Sbjct: 241 EAGSKAITTSDDMLG-IVNQL 260


>gi|52785608|ref|YP_091437.1| flagellar basal body rod protein FlgG [Bacillus licheniformis ATCC
           14580]
 gi|163119437|ref|YP_079022.2| flagellar basal body rod protein FlgG [Bacillus licheniformis ATCC
           14580]
 gi|319645990|ref|ZP_08000220.1| FlgE protein [Bacillus sp. BT1B_CT2]
 gi|52348110|gb|AAU40744.1| FlgE [Bacillus licheniformis ATCC 14580]
 gi|145902944|gb|AAU23384.2| flagellar hook protein [Bacillus licheniformis ATCC 14580]
 gi|317391740|gb|EFV72537.1| FlgE protein [Bacillus sp. BT1B_CT2]
          Length = 263

 Score =  165 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 46/260 (17%), Positives = 96/260 (36%), Gaps = 21/260 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--------- 51
           M  S   G++     + +L  VA+N+SN +T G++  +V F ++V    +          
Sbjct: 1   MLRSLYSGISGMKNFQTKLDVVANNISNINTAGYKKSRVTFKDIVSQQLSGASSSTANRG 60

Query: 52  ---IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                Q       G   +     +  +TG +LD  + GD +F + S   +  TR G F  
Sbjct: 61  SVNGQQVGLGATIGSIDIIHTNAAPSTTGRQLDMTITGDGYFRVGSGDEVYYTRSGNFYR 120

Query: 109 TDDGSLVSASGKYPVLDMAS----VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
           +D+G LV+  G + +                           + + + +    + L +  
Sbjct: 121 SDEGDLVTVDGLFVLTANNGRINIPQDAQSFSIAPDGTVSYVDQNNENQTAGQISLATFS 180

Query: 165 MSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
            + G  +  ++     +     +     +     ++   LE SN +   E  +MI   + 
Sbjct: 181 NTSGLSKAGDNLYRETLSSGDPQVVVPGEGGSGKIQTSALEMSNVDLSEEFSEMIIAQRG 240

Query: 220 FNSITTLIDENEKSMLEAIR 239
           F S   +I  +++ + E + 
Sbjct: 241 FQSNAKIITTSDEILQELVN 260


>gi|319649558|ref|ZP_08003714.1| flagellar hook protein [Bacillus sp. 2_A_57_CT2]
 gi|317398720|gb|EFV79402.1| flagellar hook protein [Bacillus sp. 2_A_57_CT2]
          Length = 268

 Score =  165 bits (417), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 46/265 (17%), Positives = 93/265 (35%), Gaps = 26/265 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++     + +L  + +N++N +T G++  +V F ++V    +          
Sbjct: 1   MLRSMYSGISGMKNFQTKLDVIGNNIANVNTFGYKKGRVNFKDMVSQTISGATGSGENSG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                Q                GS  +TG  LD  ++GD +  ++       TR G   +
Sbjct: 61  GINPKQVGLGSQLSSIDTIDTQGSLQTTGRVLDIGIQGDGYLMVQRGNNTYYTRAGNLYL 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI---------ATMG 159
            DD +LV+ASG        +          +              +I           +G
Sbjct: 121 DDDANLVTASGDKIKGADGAAIQLNGGDATVIKSLSISNDGTINFLIDGNDTLQAAGPIG 180

Query: 160 LYSVDMSQGFVRRENSGISPNIP-----PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMI 214
           +   + + G  +  ++     +      P    +     +  G LE SN +   E  +MI
Sbjct: 181 IARFNNNGGLEKIGDNLYKDTVNSGDAVPLTPGEDGAGILVSGTLEMSNVDLSEEFTEMI 240

Query: 215 HLTQKFNSITTLIDENEKSMLEAIR 239
              + F + T +I  +++ + E + 
Sbjct: 241 TAQRGFQANTRIITTSDEILQELVN 265


>gi|91224197|ref|ZP_01259460.1| putative flagellar basal-body rod protein [Vibrio alginolyticus
           12G01]
 gi|269965646|ref|ZP_06179759.1| Putative flagellar basal-body rod protein flgG [Vibrio
           alginolyticus 40B]
 gi|91191108|gb|EAS77374.1| putative flagellar basal-body rod protein [Vibrio alginolyticus
           12G01]
 gi|269829714|gb|EEZ83950.1| Putative flagellar basal-body rod protein flgG [Vibrio
           alginolyticus 40B]
          Length = 261

 Score =  165 bits (417), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 45/255 (17%), Positives = 94/255 (36%), Gaps = 20/255 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M ++  +      A + +++ +++N++N +TVGF+  +V F ++  +I+           
Sbjct: 1   MHSALWVSKTGMAAQDTKMTAISNNLANVNTVGFKRDRVVFEDLFYSIQRQPGAQVDQVN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106
                 Q  S V           G+  +T  ELD A+ G  +F +E+    I+ TR+G+F
Sbjct: 61  ELPSGIQLGSGVRVVGTQKVFTQGNTQNTTQELDLAVMGQGFFQIENSDGQIMYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQI-PQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
               +G +V++ G      +      +         V          + +  + L     
Sbjct: 121 HRNSEGLMVNSQGLPLEPQIQIPDNAVSFSVGVDGTVTTTTADDPTPQQLGQITLAKFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +         P ++          +K+G LE SN   + EM  MI   + +
Sbjct: 181 PAGLEAMGGNLFRETEASGPADELIAGADGAGIIKQGALEGSNVQVVEEMVDMITTQRAY 240

Query: 221 NSITTLIDENEKSML 235
                ++   +  + 
Sbjct: 241 EMNAKVVSAADDMLK 255


>gi|149191155|ref|ZP_01869413.1| putative flagellar basal-body rod protein [Vibrio shilonii AK1]
 gi|148834993|gb|EDL51972.1| putative flagellar basal-body rod protein [Vibrio shilonii AK1]
          Length = 261

 Score =  165 bits (417), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 41/260 (15%), Positives = 96/260 (36%), Gaps = 20/260 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M ++  I      A + +++ +++N++N +TVGF+  +V F ++  ++      +     
Sbjct: 1   MHSALWISKTGMAAQDAKMTAISNNLANINTVGFKRDRVVFEDLFYSVDKQAGTETTELN 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                    + V           G+  +T  + D A+ GD +F +E+  G +  TR+G+F
Sbjct: 61  EHPTGIQLGNGVRVVGTEKVFTQGNVQNTNQQFDLAILGDGFFQIENSDGELLYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLD-MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +   DG LV+  G   + + +      +                   + +  + +     
Sbjct: 121 QTNSDGQLVNTQGYPLIPEIVIPPEATLVSITADGVATATIPGQVNPEALGQITIVKFMN 180

Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   +  +  +         +          +K+G LE SN   + EM  MI   + +
Sbjct: 181 PAGLAAQGGNLFAETEGSGEAVELVAGTEGSGQLKQGALEGSNVQVVEEMVDMIATQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRN 240
                ++   ++ +    + 
Sbjct: 241 EMSAKMVSAADEMLQYIAQQ 260


>gi|330875986|gb|EGH10135.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
 gi|330967093|gb|EGH67353.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 262

 Score =  165 bits (417), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 45/262 (17%), Positives = 96/262 (36%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  +      A +  L+T+++N++N  T GF++ + +F +++  IK           
Sbjct: 1   MLPALYVAKTGLAAQDTNLTTISNNLANVSTTGFKSDRAEFQDLLYQIKRQPGAQSTQDS 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V       +   GS  +T   LD A+ G  +F +  P   I  +RDG F
Sbjct: 61  ELPSGLQLGTGVRIVGTQKNFTAGSLQTTNNPLDLAVNGRGFFQVTQPDGTIAYSRDGTF 120

Query: 107 KVTDDGSLVSASGK--YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
            +   G +V+A+G    P + +           +          +   +VI  +      
Sbjct: 121 HLNSTGQIVTATGYALEPAIVVPQNAQTFTVGQDGTVSVTLAGATATSQVIGNIQTADFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +           +  +          +  LE+SN +++ E+  MI   + 
Sbjct: 181 NPAGLQAIGGNLYLETASSGAPQIGTPGLNGLGPTLQNTLENSNVSTVEELVNMITTQRA 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   ++ +    +N+
Sbjct: 241 YEMNSKVISTADQMLQNLTQNL 262


>gi|206558970|ref|YP_002229730.1| flagellar basal body rod protein FlgG [Burkholderia cenocepacia
           J2315]
 gi|198035007|emb|CAR50879.1| flagellar basal-body rod protein FlgG (distal rod protein)
           [Burkholderia cenocepacia J2315]
          Length = 262

 Score =  165 bits (417), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 89/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A + ++  +++N++NT T GF+  +  F +++               
Sbjct: 1   MNRSLYIAATGMNAQQAQMDVISNNLANTSTNGFKASRAVFEDLLYQTIRQPGANSTQQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           G    TG   D A+ G  +F +  P G    TRDG F
Sbjct: 61  ELPSGLQLGTGVQQVATERLYTQGGLTQTGNSKDVAINGAGFFQVLMPDGTNAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +    G LV++SG   +  +            +   V      S     I ++ + +   
Sbjct: 121 QTNAQGQLVTSSGYQVLPAITVPQNAQSLTIGKDGVVSVTQPGSSNAVQIGSLQIATFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   +  +  +                    + +G++E SN N + E+  MI   + +
Sbjct: 181 PAGLEAKGENLFAETTSSGAPNVSQPGLNGAGVLNQGYVEASNVNVVQELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ +    +
Sbjct: 241 EINSKAVTTSDQMLQTVTQ 259


>gi|57167709|ref|ZP_00366849.1| flagellar basal-body rod protein (flgG) [Campylobacter coli RM2228]
 gi|305433215|ref|ZP_07402371.1| flagellar basal-body rod protein FlgG [Campylobacter coli JV20]
 gi|57020831|gb|EAL57495.1| flagellar basal-body rod protein (flgG) [Campylobacter coli RM2228]
 gi|304443916|gb|EFM36573.1| flagellar basal-body rod protein FlgG [Campylobacter coli JV20]
          Length = 263

 Score =  165 bits (417), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 41/262 (15%), Positives = 95/262 (36%), Gaps = 22/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS--- 57
           M  S +      +A + ++   ++N++N +T GF+  + +F++++  +        S   
Sbjct: 1   MMRSLHTAATGMVAQQTQIDVTSNNIANVNTAGFKKGRAEFADLMYQVMKYAGTSTSATT 60

Query: 58  -----------FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGR 105
                         +    +  E     ++   LD A+ G+ +F ++ P   I  TR+G+
Sbjct: 61  LSPSGIEVGIGVRPTAVTKVFTEGNLKATSTDSLDMAIAGNGFFQIQLPDGTIAYTRNGQ 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVD 164
           F   ++G++V+A G   + +M                        Q+   I  + L    
Sbjct: 121 FTKDNEGNIVNADGYRLLPEMTIPEGATAINVATDGTVSVMLPGEQQETQIGQVELVQFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G     ++                      T++ GF+E SN   + EM  +I   + 
Sbjct: 181 NPAGLHSMGDNLYLETGASGAPVAGIATQDGLGTIRHGFIELSNVQLVEEMTDLITGQRA 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           + + +  I  ++  +   +  +
Sbjct: 241 YEAGSKAITTSDDMLG-IVNQL 261


>gi|109899400|ref|YP_662655.1| flagellar basal body rod protein FlgG [Pseudoalteromonas atlantica
           T6c]
 gi|109701681|gb|ABG41601.1| flagellar basal-body rod protein FlgG [Pseudoalteromonas atlantica
           T6c]
          Length = 262

 Score =  165 bits (417), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 45/262 (17%), Positives = 97/262 (37%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +  I      A +  ++ +++N++N  TVGF+  +  F +++    N    +     
Sbjct: 1   MHPALWISKTGLDAAQTDVAVISNNLANASTVGFKKDRAIFEDLLYQNINQPGGRSSADT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    +         +   G+ ++T   LD +++G  +F ++ P   I  TR+G+F
Sbjct: 61  ELPSGLMLGAGSKVVATQKAHTQGNMLTTENALDMSIQGRGFFEIQQPDGSIAYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI--SQKGKVIATMGLYSVD 164
            + D+G +V+    + +    +VP    Q     +      I      +V+  + L    
Sbjct: 121 TLNDEGQIVTPGAGFLLQPNITVPEDAQQITISQDGEVSASIRGQADPQVLGQISLSDFV 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +                      TV +G LE SN N   E+  +I   + 
Sbjct: 181 NMTGLQPIGQNLYVETATSGAPIQGVPGLEGLGTVVQGALETSNVNVTEELVNLIESQRL 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   +  + + I+ +
Sbjct: 241 YEMNSKVISAVDSMLGQVIQQL 262


>gi|15964409|ref|NP_384762.1| flagellar basal body rod protein FlgF [Sinorhizobium meliloti 1021]
 gi|307311551|ref|ZP_07591192.1| flagellar basal-body rod protein FlgF [Sinorhizobium meliloti
           BL225C]
 gi|17380373|sp|O54248|FLGF_RHIME RecName: Full=Flagellar basal-body rod protein flgF
 gi|15073586|emb|CAC45228.1| Flagellar basal-body rod protein [Sinorhizobium meliloti 1021]
 gi|306899568|gb|EFN30197.1| flagellar basal-body rod protein FlgF [Sinorhizobium meliloti
           BL225C]
          Length = 241

 Score =  165 bits (417), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 109/242 (45%), Positives = 164/242 (67%), Gaps = 4/242 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           MQT   + L++Q+ALE+RL+T+ADN++N++TVGFR  +VKF++V+G  K     K+S+V+
Sbjct: 1   MQTGLYVALSSQMALEKRLNTLADNIANSNTVGFRATEVKFNQVLGDTK---PTKVSYVS 57

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
            G+E+LS + G+   TG+ LDFA++GDAWF++++P G  LTRDGRF +T+ G LV+  G 
Sbjct: 58  EGEEFLSTKTGALARTGSALDFAIKGDAWFSIDTPGGPALTRDGRFTLTETGELVTIKGY 117

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
            PVLD    PIQ+        VG  G I Q G  IA +GLY  D S+GF+R +NS + P 
Sbjct: 118 -PVLDAGGAPIQLNGGAGEIAVGADGAIHQNGVQIALLGLYEADFSKGFMRYDNSSVMPA 176

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
             P P+ D   V V +GFLE+SN N++ EM Q+I +T+ F+++T L+ ++E S+ +AI  
Sbjct: 177 AQPEPVVDRFDVGVMQGFLEESNVNAIQEMSQLIMITRAFDNVTALMRDSEGSLDKAIET 236

Query: 241 IA 242
           + 
Sbjct: 237 LG 238


>gi|288962677|ref|YP_003452971.1| flagellar basal-body rod protein [Azospirillum sp. B510]
 gi|288914943|dbj|BAI76427.1| flagellar basal-body rod protein [Azospirillum sp. B510]
          Length = 243

 Score =  165 bits (417), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 72/242 (29%), Positives = 121/242 (50%), Gaps = 2/242 (0%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M+    IGL+ Q+AL ++L  VA+N++N +T GFR  +  F   + A       +I+F  
Sbjct: 1   MENQLYIGLSRQMALRRQLDVVANNVANMNTAGFRGERTLFEAAMEAGGRKPTDRIAFTI 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
               Y     G+   TG   D AL+GD + A+++P G+  TRDGR +   DG+LV  +G 
Sbjct: 61  DRATYTDLRPGALTETGNPYDVALDGDGFLAVQTPDGVRYTRDGRLRRDADGTLVGPNGY 120

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
            PVLD    PI IP +    ++G  G +S  G V++ + ++  D  Q   +  +    P 
Sbjct: 121 -PVLDDGRRPIVIPSESSKISIGSDGLLSADGTVVSRIAVFRFDTPQALKQTGDLLFDPP 179

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
               P        +  G  E SN   + E+G+M+ LT+ + ++T ++D+ +  +  AI  
Sbjct: 180 AGLEPRP-APDTRLVEGKTERSNVQGIVEIGRMMDLTRDYQAVTRMVDDGQDLLRSAINR 238

Query: 241 IA 242
           + 
Sbjct: 239 LG 240


>gi|154174905|ref|YP_001408076.1| flagellar basal body rod protein FlgG [Campylobacter curvus 525.92]
 gi|112802860|gb|EAU00204.1| flagellar basal-body rod protein FlgG [Campylobacter curvus 525.92]
          Length = 262

 Score =  165 bits (417), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 40/261 (15%), Positives = 91/261 (34%), Gaps = 21/261 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ------ 54
           M  S        +A + ++   ++N++N +T G++  + +F++++  +            
Sbjct: 1   MMRSLYTAATGMIAQQTQIDVTSNNIANVNTYGYKKNRAEFADLMYQVMEYAGTATSQTT 60

Query: 55  -------KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                      V           G F  T   LD  + G+ +F L+ P      TR+G F
Sbjct: 61  TSPTGIEVGLGVRPTAINKIFSQGYFKETSNNLDMVIAGNGFFQLQLPDGTTAYTRNGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           K+  +G++V++ G   +  +                V            I  + + +   
Sbjct: 121 KLDSNGTIVNSDGYQLIPQIVVPANATQISIGTDGTVSVLQAGETNMAQIGQIQIANFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++                      T+++GF+E SN   + EM  +I   + +
Sbjct: 181 PAGLHSMGDNNYLETAASGDAVVGVAGLDGLGTIRQGFVEMSNVQLVEEMTDLITGQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
            + +  I  ++  + E +  +
Sbjct: 241 EANSKAITTSDSML-EIVNGL 260


>gi|332305617|ref|YP_004433468.1| flagellar basal-body rod protein FlgG [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332172946|gb|AEE22200.1| flagellar basal-body rod protein FlgG [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 262

 Score =  165 bits (417), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 45/262 (17%), Positives = 97/262 (37%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +  I      A +  ++ +++N++N  TVGF+  +  F +++    N    +     
Sbjct: 1   MHPALWISKTGLDAAQTDVAVISNNLANASTVGFKKDRAIFEDLLYQNINQPGGRSSADT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    +         +   G+ ++T   LD +++G  +F ++ P   I  TR+G+F
Sbjct: 61  ELPSGLMLGAGSKVVATQKAHTQGNMLTTENALDMSIQGRGFFEIQQPDGTIAYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI--SQKGKVIATMGLYSVD 164
            + D+G +V+    + +    +VP    Q     +      I      +V+  + L    
Sbjct: 121 TLNDEGQIVTPGAGFLLQPNITVPEDAQQITISQDGEVSASIRGQADPQVLGQISLSDFV 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +                      TV +G LE SN N   E+  +I   + 
Sbjct: 181 NMTGLQPIGQNLYVETATSGAPIQGVPGLEGLGTVVQGALETSNVNVTEELVNLIESQRL 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   +  + + I+ +
Sbjct: 241 YEMNSKVISAVDSMLGQVIQQL 262


>gi|313141242|ref|ZP_07803435.1| flagellar basal-body rod protein distal rod protein [Helicobacter
           canadensis MIT 98-5491]
 gi|313130273|gb|EFR47890.1| flagellar basal-body rod protein distal rod protein [Helicobacter
           canadensis MIT 98-5491]
          Length = 262

 Score =  165 bits (417), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 46/261 (17%), Positives = 100/261 (38%), Gaps = 23/261 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55
             +        L  + ++   ++N+SN +T G+R  + +F+++   +             
Sbjct: 1   MRALYTATTGMLGQQLQIDVTSNNISNVNTFGYRKERAEFADLFHQVLQYAGSSTSETTL 60

Query: 56  -------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFK 107
                     V           G+F  T   LD A+ G+ +F +E P   I  TRDG FK
Sbjct: 61  SPTGIEVGLGVRPTSVQKIFSQGNFKETENNLDIAITGNGFFQIELPDGTIAYTRDGSFK 120

Query: 108 VTDDGSLVSASGK--YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           + D+G++V++ G    P + +     QI    +      +G  ++  + +  +   +   
Sbjct: 121 LDDEGNVVNSQGYLLVPNITIPDDATQINIGTDGTVSVVQGNETEVNE-LGQIETVNFIN 179

Query: 166 SQGFVRRENSGI-SPNIPPTP----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++   + N    P            +++GF+E SN   + EM  +I   + +
Sbjct: 180 PAGLHALGDNLYLNTNASGDPIVGTPGLNGFGQLRQGFVETSNVKLVEEMTDLIVGQRAY 239

Query: 221 NSITTLIDENEKSMLEAIRNI 241
            + +  I   +  + + +  +
Sbjct: 240 EANSKSIQTADSML-QIVNQL 259


>gi|313497764|gb|ADR59130.1| FlgG [Pseudomonas putida BIRD-1]
          Length = 261

 Score =  165 bits (417), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 48/261 (18%), Positives = 97/261 (37%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  +      A +  L+ +++N++N  T GF+  + +F++++  IK           
Sbjct: 1   MLPALWVAKTGLSAQDTNLTVISNNLANVSTTGFKRDRAEFADLLYQIKRQPGAQSTQDS 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                 Q  + V       S   GS  +T   LD A+ G  +F +  P G +  TRDG F
Sbjct: 61  ELPSGLQVGTGVRIVGTQKSFVAGSLQTTENPLDMAVNGRGFFQVLQPDGTVSYTRDGTF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
            +  DG +V+A+G      +      Q     +   V      +   +VI  +       
Sbjct: 121 HLNSDGQIVTANGYALEPAIVVPNDAQTFTVGQDGTVSITTAGNPAAQVIGNIQTADFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++           +          T  +  LE+SN +++ E+  MI   + +
Sbjct: 181 PAGLQAIGDNLFLETAASGAPQVGTPGLNGFGTTLQQTLENSNVSTVEELVNMITTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
              + +I   ++ +    + +
Sbjct: 241 EMNSKVISTADQMLSFVTQQL 261


>gi|261419427|ref|YP_003253109.1| flagellar basal body rod protein FlgG [Geobacillus sp. Y412MC61]
 gi|319766242|ref|YP_004131743.1| flagellar hook-basal body protein [Geobacillus sp. Y412MC52]
 gi|261375884|gb|ACX78627.1| fagellar hook-basal body protein [Geobacillus sp. Y412MC61]
 gi|317111108|gb|ADU93600.1| flagellar hook-basal body protein [Geobacillus sp. Y412MC52]
          Length = 265

 Score =  165 bits (417), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 54/263 (20%), Positives = 102/263 (38%), Gaps = 25/263 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G+ A    + +L  + +N++N +T GF+  +  F +++    +          
Sbjct: 1   MLRSMYSGIGAMRNFQTKLDVIGNNIANVNTYGFKKGRTIFKDLMSQTISGASGPNAGRG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRF 106
                Q                GS  +TG  LD A+ GD +F     S    + TR G F
Sbjct: 61  GTNPKQVGLGSQLAAIDTVHTQGSLQTTGRVLDLAISGDGFFVVGDASGNNRMYTRAGNF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG-----KVIATMGLY 161
            +   G +V+  G+Y  L + +  +Q+P   +  ++G  G+++          I T+ L 
Sbjct: 121 YLDSQGYIVNVDGQYL-LGVGNSRLQVPTDAKSLSIGADGKVTIVDASGTLSTIGTIQLA 179

Query: 162 SVDMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHL 216
               + G  +  N+              +       T+  G LE SN +   E  +MI  
Sbjct: 180 KFANNDGLEKAGNNLFRETTNSGTPTTGAPGANGTGTIVSGALEMSNVDLAEEFTEMIVA 239

Query: 217 TQKFNSITTLIDENEKSMLEAIR 239
            + F + T +I  +++ + E + 
Sbjct: 240 QRGFQANTRIITTSDEILQELVN 262


>gi|74101660|gb|AAZ99750.1| FlgGL [Aeromonas hydrophila]
          Length = 275

 Score =  165 bits (417), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 43/261 (16%), Positives = 94/261 (36%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  +      A + +++++++N++N +TVGF+  +V F ++   ++           
Sbjct: 15  MHAALWVSKTGLSAQDAKMASISNNLANVNTVGFKRDRVAFEDLFYQVQRQPGAQQDQQN 74

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G F +T  ELD A+ G  +F +E P      TR+G++
Sbjct: 75  LSPIGIQMGNGVRVVGTQKVFTPGQFQNTNQELDMAVVGAGFFGVERPDGETAYTRNGQW 134

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165
               +G LV++ G   +  +                        Q+   +  + L +   
Sbjct: 135 HRNAEGLLVNSDGLPMLPQIQIPDNATKVSIGTDGTVSATLPGQQENVELGRITLTNFTN 194

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +            +      +   +K+  LE SN N + EM  MI   + +
Sbjct: 195 PAGLEALGGNLYRATGASGEAIEGVPGEEAMGAIKQFTLESSNVNVVEEMVDMITTQRAY 254

Query: 221 NSITTLIDENEKSMLEAIRNI 241
                ++   ++ +    + +
Sbjct: 255 EMNAKVVSAADQMLKFVTQAL 275


>gi|116691038|ref|YP_836661.1| flagellar basal body rod protein FlgG [Burkholderia cenocepacia
           HI2424]
 gi|170734372|ref|YP_001766319.1| flagellar basal body rod protein FlgG [Burkholderia cenocepacia
           MC0-3]
 gi|254246967|ref|ZP_04940288.1| Flagellar basal body rod protein [Burkholderia cenocepacia PC184]
 gi|116649127|gb|ABK09768.1| flagellar basal-body rod protein FlgG [Burkholderia cenocepacia
           HI2424]
 gi|124871743|gb|EAY63459.1| Flagellar basal body rod protein [Burkholderia cenocepacia PC184]
 gi|169817614|gb|ACA92197.1| flagellar basal-body rod protein FlgG [Burkholderia cenocepacia
           MC0-3]
          Length = 262

 Score =  165 bits (417), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 89/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A + ++  +++N++NT T GF+  +  F +++               
Sbjct: 1   MNRSLYIAATGMNAQQAQMDVISNNLANTSTNGFKASRAVFEDLLYQTIRQPGANSTQQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           G    TG   D A+ G  +F +  P G    TRDG F
Sbjct: 61  ELPSGLQLGTGVQQVATERLYTQGGLTQTGNSKDVAINGAGFFQVLMPDGTNAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +    G LV++SG   +  +            +   V      S     I ++ + +   
Sbjct: 121 QTNAQGQLVTSSGYQVLPAITVPQNAQSLTIGKDGVVSVTQPGSSNAVQIGSLQIATFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   +  +  +                    + +G++E SN N + E+  MI   + +
Sbjct: 181 PTGLEAKGENLFAETTSSGAPNVSQPGLNGAGVLNQGYVEASNVNVVQELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ +    +
Sbjct: 241 EINSKAVTTSDQMLQTVTQ 259


>gi|78777301|ref|YP_393616.1| flagellar basal body rod protein FlgG [Sulfurimonas denitrificans
           DSM 1251]
 gi|78497841|gb|ABB44381.1| Flagellar basal-body rod FlgG [Sulfurimonas denitrificans DSM 1251]
          Length = 262

 Score =  165 bits (417), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 48/259 (18%), Positives = 102/259 (39%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S        + ++ +++T A+N++N +T+GF+  + +F++++  + +          
Sbjct: 1   MMQSLYTASTGMIGMQTQINTTANNIANVNTIGFKKSRAEFADLMYKVMDYAGTSTSDVT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                      V           GS   T  ELD A+ G  +F LE P    + +R+G F
Sbjct: 61  KSPTGIEVGLGVRPTAINKVFSEGSLKQTDNELDVAVTGKGFFKLELPDGSEVYSRNGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           KV ++GS+V++ G   V ++   P            V        +   I  M L +   
Sbjct: 121 KVDENGSIVNSDGYRLVPEVVIPPDATNINIGTDGTVSVVQAGQAQATQIGQMTLTNFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++            + +        +++GF+E SN   + E+  +I   + +
Sbjct: 181 PAGLHSMGDNLYIETDSSGQPVEGTPGLDGLGVLRQGFVELSNVELVVELTDLITGQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
           +S + +I  +++ +     
Sbjct: 241 DSNSKVITTSDEMLQTTNN 259


>gi|332994160|gb|AEF04215.1| flagellar basal body rod protein FlgG [Alteromonas sp. SN2]
          Length = 262

 Score =  165 bits (417), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 44/262 (16%), Positives = 97/262 (37%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +  I      A +  ++ V++N++N  TVGF+  +  F +++    N    +     
Sbjct: 1   MHPALWISKTGLDAAQTDVAVVSNNLANASTVGFKKDRAIFEDLLYQNINQPGGRSSADT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    S         +   G+ ++T   LD +++G  +F +  P   I  +R+G+F
Sbjct: 61  ELPSGLMLGSGSKVVSTQKAHTQGNLLTTDNALDMSIQGRGYFEILQPDGTIAYSRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEK--GEISQKGKVIATMGLYSVD 164
            + D G +V++   + +    ++P    Q     +           + +V+  M L    
Sbjct: 121 SMNDQGQIVTSGAGFLLQPEVAIPEDAQQITISQDGEISVSIRGQAEPQVLGQMNLSDFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +                      T+ +G LE SN N   E+  +I   + 
Sbjct: 181 NPTGLQPIGQNLYVETASSGAPIQGVPGLQGIGTIAQGTLETSNVNVTEELVNLIESQRL 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   ++ + + I+ +
Sbjct: 241 YEMNSKVISSVDQMLGQVIQQL 262


>gi|302390534|ref|YP_003826355.1| flagellar basal-body rod protein FlgF [Thermosediminibacter oceani
           DSM 16646]
 gi|302201162|gb|ADL08732.1| flagellar basal-body rod protein FlgF [Thermosediminibacter oceani
           DSM 16646]
          Length = 260

 Score =  165 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 51/265 (19%), Positives = 105/265 (39%), Gaps = 30/265 (11%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M        +  LA   R   +++N++N +T GF+  +  F        +  D       
Sbjct: 1   MIRGLYTSASGMLAEMARTDVISNNLANINTTGFKKDRAVFRAFPEMNIHRYDDPQPVGA 60

Query: 56  -------------ISFVASGKEYLSKEVGSFISTGTELDFALEG-----DAWFALESPRG 97
                         +     +  +    G    T   LD A+E       ++F +++P G
Sbjct: 61  GFVIDPVPYIGVLGTGAGLDEIRVDFTQGRIEMTSNPLDLAIEDTAAGETSFFEIQTPAG 120

Query: 98  IILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157
           I  TRDG F +  DG LV+  G Y + +   + ++   K EI     +GE+   G ++  
Sbjct: 121 IRYTRDGSFTINADGFLVTREGYYVMGENGPINLRNGSKVEI---NTEGEVYLDGLMVDR 177

Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217
           + + +        ++ ++       P P    +   + +G LE +N N++ EM  +I   
Sbjct: 178 LRIAAFPAGLSLEKQGDNLYRAQGVPLP----ANARIIQGALERANVNAVSEMVNLISAF 233

Query: 218 QKFNSITTLIDENEKSMLEAIRNIA 242
           + + +   ++  ++ ++  A+  IA
Sbjct: 234 RAYEANQRMVRAHDDTLAGAVNEIA 258


>gi|239995123|ref|ZP_04715647.1| flagellar basal body rod protein FlgG [Alteromonas macleodii ATCC
           27126]
          Length = 262

 Score =  165 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 41/262 (15%), Positives = 96/262 (36%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +  I      A +  ++ V++N++N  TVGF+  +  F +++    N    +     
Sbjct: 1   MHPALWISKTGLDAAQTDVAVVSNNLANASTVGFKKDRAVFEDLLYQNINQPGGRSSADT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    S         +   G+ ++T   LD +++G  +F +  P   I  +R+G+F
Sbjct: 61  ELPSGLMLGSGSKVVATQKAHTQGNLLTTENALDMSIQGRGYFEILQPDGTIAYSRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEK--GEISQKGKVIATMGLYSVD 164
            + D G +V++   + +    ++P    Q     +           + +V+  + +    
Sbjct: 121 SLNDQGQIVTSGAGFLLQPEVAIPEDAQQITISQDGEISVSIRGQAEPQVLGQLNISDFV 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +                       + +G LE SN N   E+  +I   + 
Sbjct: 181 NPTGLQPTGQNLYVETASSGAPIQGIPGLQGLGYISQGTLETSNVNVTEELVNLIESQRL 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   ++ + + I+ +
Sbjct: 241 YEMNSKVISSVDQMLGQVIQQL 262


>gi|254227985|ref|ZP_04921415.1| flagellar basal-body rod protein FlgG [Vibrio sp. Ex25]
 gi|151939481|gb|EDN58309.1| flagellar basal-body rod protein FlgG [Vibrio sp. Ex25]
          Length = 261

 Score =  165 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 46/255 (18%), Positives = 94/255 (36%), Gaps = 20/255 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M ++  +      A + +++ +++N++N +TVGF+  +V F ++  +I+           
Sbjct: 1   MHSALWVSKTGMAAQDTKMTAISNNLANVNTVGFKRDRVVFEDLFYSIQRQPGAQVDQVN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106
                 Q  S V           G+  +T  ELD A+ G  +F +E+    I+ TR+G+F
Sbjct: 61  EVPSGIQLGSGVRVVGTQKVFTQGNTQNTTQELDLAVMGQGFFQIENSDGQIMYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
            V  +G +V++ G      +                V          + +  + L     
Sbjct: 121 HVNSEGLMVNSQGLPLEPQIQIPDNASSFSVGVDGTVTTTTADDPTPQQLGQITLAKFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +         P +     +     +K+G LE SN   + EM  MI   + +
Sbjct: 181 PAGLEAVGGNLFRETEASGPADELIAGEDGAGLIKQGALEGSNVQVVEEMVDMITTQRAY 240

Query: 221 NSITTLIDENEKSML 235
                ++   +  + 
Sbjct: 241 EMNAKVVSAADDMLK 255


>gi|150395479|ref|YP_001325946.1| flagellar basal body rod protein FlgF [Sinorhizobium medicae
           WSM419]
 gi|150026994|gb|ABR59111.1| flagellar basal body rod protein [Sinorhizobium medicae WSM419]
          Length = 241

 Score =  165 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 107/242 (44%), Positives = 164/242 (67%), Gaps = 4/242 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           MQT   + L++Q+ALE+RL+T+ADN++N++TVGFR  +VKF++V+G  K     K+S+V+
Sbjct: 1   MQTGLYVALSSQMALEKRLNTLADNIANSNTVGFRATEVKFNQVLGDTK---PTKVSYVS 57

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
            G+E+LS + G+   TG+ LDFA++GDAWF++++P G  LTRDGRF +T+ G LV+  G 
Sbjct: 58  EGEEFLSTKTGALARTGSALDFAVKGDAWFSIDTPGGPALTRDGRFTLTEAGELVTIKGY 117

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
            PVLD    PIQ+        VG  G I Q G  +A +GL+  D S+GF+R +NS + P 
Sbjct: 118 -PVLDAGGAPIQLNGGAGEITVGADGAIHQNGVQVALLGLHEADFSKGFMRYDNSAVMPA 176

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
             P P+ D   V V +GFLE+SN N++ EM Q+I +T+ F+++T L+ ++E S+ +AI  
Sbjct: 177 AQPEPVVDRFDVGVMQGFLEESNVNAVQEMSQLIMITRAFDNVTALMRDSEGSIDKAIET 236

Query: 241 IA 242
           + 
Sbjct: 237 LG 238


>gi|307318906|ref|ZP_07598337.1| flagellar basal-body rod protein FlgF [Sinorhizobium meliloti AK83]
 gi|306895320|gb|EFN26075.1| flagellar basal-body rod protein FlgF [Sinorhizobium meliloti AK83]
          Length = 241

 Score =  165 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 108/242 (44%), Positives = 163/242 (67%), Gaps = 4/242 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           MQT   + L++Q+ALE+RL+T+ADN++N++TVGFR  +VKF++V+G  +     K+S+V+
Sbjct: 1   MQTGLYVALSSQMALEKRLNTLADNIANSNTVGFRATEVKFNQVLGDTR---PTKVSYVS 57

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
            G+E+LS + G+   TG+ LDFA++GDAWF++ +P G  LTRDGRF +T+ G LV+  G 
Sbjct: 58  EGEEFLSTKTGALARTGSALDFAIKGDAWFSIGTPGGPALTRDGRFTLTETGELVTIKGY 117

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
            PVLD    PIQ+        VG  G I Q G  IA +GLY  D S+GF+R +NS + P 
Sbjct: 118 -PVLDAGGAPIQLNGGAGEITVGADGAIHQNGVQIALLGLYEADFSKGFMRYDNSSVMPA 176

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
             P P+ D   V V +GFLE+SN N++ EM Q+I +T+ F+++T L+ ++E S+ +AI  
Sbjct: 177 AQPEPVVDRFDVGVMQGFLEESNVNAIQEMSQLIMITRAFDNVTALMRDSEGSLDKAIET 236

Query: 241 IA 242
           + 
Sbjct: 237 LG 238


>gi|332140548|ref|YP_004426286.1| flagellar basal body rod protein FlgG [Alteromonas macleodii str.
           'Deep ecotype']
 gi|327550570|gb|AEA97288.1| flagellar basal body rod protein FlgG [Alteromonas macleodii str.
           'Deep ecotype']
          Length = 262

 Score =  165 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 41/262 (15%), Positives = 96/262 (36%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +  I      A +  ++ V++N++N  TVGF+  +  F +++    N    +     
Sbjct: 1   MHPALWISKTGLDAAQTDVAVVSNNLANASTVGFKKDRAVFEDLLYQNINQPGGRSSADT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    S         +   G+ ++T   LD +++G  +F +  P   I  +R+G+F
Sbjct: 61  ELPSGLMLGSGSKVVATQKAHTQGNLLTTENALDMSIQGRGYFEILQPDGTIAYSRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEK--GEISQKGKVIATMGLYSVD 164
            + D G +V++   + +    ++P    Q     +           + +V+  + +    
Sbjct: 121 SLNDQGQIVTSGAGFLLQPEVAIPEDAQQITISQDGEISVSIRGQAEPQVLGQLNISDFV 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +                       + +G LE SN N   E+  +I   + 
Sbjct: 181 NPTGLQPTGQNLFVETASSGAPIQGIPGLQGLGYISQGTLETSNVNVTEELVNLIESQRL 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   ++ + + I+ +
Sbjct: 241 YEMNSKVISSVDQMLGQVIQQL 262


>gi|38570330|gb|AAR24613.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni]
          Length = 263

 Score =  165 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 40/262 (15%), Positives = 96/262 (36%), Gaps = 22/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S +      +A + ++   ++N++N +T GF+  + +F++++  +            
Sbjct: 1   MMRSLHTAATGMVAQQTQIDVTSNNIANVNTAGFKESRAEFADLMYQVMKYAGTSTSATT 60

Query: 56  ---------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGR 105
                    +    +    +  E     ++   LD A+ G+ +F ++ P G I  TR+G+
Sbjct: 61  LSPSGIEVGVGVRPTAVTKVFTEGNLKSTSTDGLDMAIAGNGFFQIQLPDGTIGYTRNGQ 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVD 164
           F   ++G++V++ G   + +M                        Q+   I  + L    
Sbjct: 121 FTKDNEGNIVNSDGYRLLPEMTIPEGATAINVATDGTVSVMLPGEQQETQIGQVELVQFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G     ++                      T++ GF+E SN   + EM  +I   + 
Sbjct: 181 NPAGLHSMGDNLYLETGASGAPVAGIAGQDGLGTIRHGFIELSNVQLVEEMTDLITGQRA 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           + + +  I  ++  +   +  +
Sbjct: 241 YEAGSKAITTSDDMLG-IVNQL 261


>gi|291334316|gb|ADD93977.1| flagellar basal body rod protein FlgG [uncultured marine bacterium
           MedDCM-OCT-S09-C247]
          Length = 257

 Score =  165 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 41/257 (15%), Positives = 88/257 (34%), Gaps = 20/257 (7%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--------- 55
            ++      A + ++  +A+N++N +T GF+  +  F  +   I      +         
Sbjct: 1   MHVAKTGLNAQQYKMQVIANNLANVNTTGFKRDRANFESLFYQIVKTAGAQTADDTALTS 60

Query: 56  ----ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTD 110
                + V           G  +ST   LD A++G  +F    P   +  TR G      
Sbjct: 61  PLAVGTGVKVVSTQKLFTQGGLVSTDNSLDLAIDGQGFFQALLPDGRVGYTRSGILSRNA 120

Query: 111 DGSLVSASGKYPVLDMASVPIQIP-QKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169
           +G L + SG      +                V      +   + +  + + +    +G 
Sbjct: 121 EGVLTTTSGYVLQPQIQLPADATSINVSTTGIVSVTEPGNDIAQEVGQISIANFSNPRGL 180

Query: 170 VRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224
                +   P+      ++ +        V +G++E SN N + ++  MI   + +   +
Sbjct: 181 TPIGENFFVPSAESGVAQEGAPLDGGFGKVLQGYVESSNVNVVQQLVDMIETQRAYEVSS 240

Query: 225 TLIDENEKSMLEAIRNI 241
             I   ++ M    RN+
Sbjct: 241 KSITAVDEMMQFISRNL 257


>gi|222147571|ref|YP_002548528.1| flagellar basal-body rod protein [Agrobacterium vitis S4]
 gi|221734559|gb|ACM35522.1| flagellar basal-body rod protein [Agrobacterium vitis S4]
          Length = 263

 Score =  165 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 45/262 (17%), Positives = 92/262 (35%), Gaps = 22/262 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             +  I      A +  L  +++N++N +T GF+  + +FS+++   +  +         
Sbjct: 1   MRALAIASTGMNAQQTNLEVISNNIANINTTGFKKSRAEFSDLLYQTEKAVGVANRANQS 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR--GIILTRDGR 105
                      V +       E G    T  ELD A+ G  +  ++SP       TR G 
Sbjct: 61  TVPEGANIGLGVQTAAVRTMNEQGELSETSNELDVAIVGRGYLQVQSPDGATTFYTRAGA 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVD 164
                DG+LV+  G   + ++         K  E   V      S     +  +   +  
Sbjct: 121 LNKDSDGNLVTTEGYKIIPNITIPTDATEVKISESGEVSVLQGDSSTYTTLGQLETSAFV 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G     ++            +          +K+G+LE SN +S+ E+  +I   + 
Sbjct: 181 NPAGLKAIGDNLFQETASSGNPINGVPGDAGYGYLKQGYLESSNVDSVTEITSLISAQRA 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   ++      +N+
Sbjct: 241 YEMNSKVITTADEMAQIVSKNL 262


>gi|115353116|ref|YP_774955.1| flagellar basal body rod protein FlgG [Burkholderia ambifaria AMMD]
 gi|170703098|ref|ZP_02893918.1| flagellar basal-body rod protein FlgG [Burkholderia ambifaria
           IOP40-10]
 gi|171321840|ref|ZP_02910741.1| flagellar basal-body rod protein FlgG [Burkholderia ambifaria
           MEX-5]
 gi|172061970|ref|YP_001809622.1| flagellar basal body rod protein FlgG [Burkholderia ambifaria
           MC40-6]
 gi|115283104|gb|ABI88621.1| flagellar basal-body rod protein FlgG [Burkholderia ambifaria AMMD]
 gi|170131995|gb|EDT00503.1| flagellar basal-body rod protein FlgG [Burkholderia ambifaria
           IOP40-10]
 gi|171092878|gb|EDT38130.1| flagellar basal-body rod protein FlgG [Burkholderia ambifaria
           MEX-5]
 gi|171994487|gb|ACB65406.1| flagellar basal-body rod protein FlgG [Burkholderia ambifaria
           MC40-6]
          Length = 262

 Score =  165 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 89/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A + ++  +++N++NT T GF+  +  F +++               
Sbjct: 1   MNRSLYIAATGMNAQQAQMDVISNNLANTSTNGFKASRAVFEDLLYQTIRQPGANSTQQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           G    TG   D A+ G  +F +  P G    TRDG F
Sbjct: 61  ELPSGLQLGTGVQQVATERLYTQGGLTQTGNSKDVAINGAGFFQVLMPDGTNAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +    G LV++SG   +  +            +   V      S     I ++ + +   
Sbjct: 121 QTNAQGQLVTSSGYQILPAITVPQNAQSLTIGKDGVVSVTQPGSSNAVQIGSLQIATFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   +  +  +                    + +G++E SN N + E+  MI   + +
Sbjct: 181 PAGLEAKGENLFAETTSSGAPNVAQPGLNGAGVLNQGYVEASNVNVVQELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ +    +
Sbjct: 241 EINSKAVTTSDQMLQTVTQ 259


>gi|15616948|ref|NP_240161.1| flagellar basal body rod protein FlgG [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219681701|ref|YP_002468087.1| flagellar basal-body rod protein FlgG [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|219682256|ref|YP_002468640.1| flagellar basal-body rod protein FlgG [Buchnera aphidicola str.
           Tuc7 (Acyrthosiphon pisum)]
 gi|257471397|ref|ZP_05635396.1| flagellar basal body rod protein FlgG [Buchnera aphidicola str.
           LSR1 (Acyrthosiphon pisum)]
 gi|11386809|sp|P57424|FLGG_BUCAI RecName: Full=Flagellar basal-body rod protein flgG; AltName:
           Full=Distal rod protein
 gi|25298916|pir||G84969 flagellar basal-body rod protein flgG [imported] - Buchnera sp.
           (strain APS)
 gi|10039013|dbj|BAB13047.1| flagellar basal-body rod protein flgG [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219621989|gb|ACL30145.1| flagellar basal-body rod protein FlgG [Buchnera aphidicola str.
           Tuc7 (Acyrthosiphon pisum)]
 gi|219624544|gb|ACL30699.1| flagellar basal-body rod protein FlgG [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|311086079|gb|ADP66161.1| flagellar basal body rod protein FlgG [Buchnera aphidicola str.
           LL01 (Acyrthosiphon pisum)]
 gi|311086651|gb|ADP66732.1| flagellar basal body rod protein FlgG [Buchnera aphidicola str.
           TLW03 (Acyrthosiphon pisum)]
 gi|311087237|gb|ADP67317.1| flagellar basal body rod protein FlgG [Buchnera aphidicola str.
           JF99 (Acyrthosiphon pisum)]
 gi|311087756|gb|ADP67835.1| flagellar basal body rod protein FlgG [Buchnera aphidicola str.
           JF98 (Acyrthosiphon pisum)]
          Length = 260

 Score =  165 bits (416), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 94/259 (36%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S  I      A +  ++ +++N++N  T GF+  +  F +++     +         
Sbjct: 1   MIPSLWISKTGLDAQQINMNIISNNLANVSTNGFKRSRAVFEDLMYQTIREAGTNSSLET 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    + V           G+   T    D A+ G  +F ++ P   I  TRDG F
Sbjct: 61  TLPSGLQLGTGVRPVSTERIHTQGNLSKTDASKDVAINGSGFFQVQLPDGNIAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           ++  +G LV+ SG   + ++                +    +   +  ++  + L +   
Sbjct: 121 QLDQNGQLVTNSGFPIIPEINIPSNSTNINIARDGVISVVVQGQTQPVLLGQLNLINFVN 180

Query: 166 SQGFVRRENSGISPN-IPPTPLED----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
           + G      +         +P+E          + +G++E SN N   E+  MI   + +
Sbjct: 181 NSGLESLGENLYQETQASGSPIETTPGLNGTGVLYQGYVETSNVNVAEELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  I  +++ + +  +
Sbjct: 241 EINSKSISTSDQMLQKLSQ 259


>gi|77359724|ref|YP_339299.1| flagellar basal body rod protein FlgG [Pseudoalteromonas
           haloplanktis TAC125]
 gi|76874635|emb|CAI85856.1| flagellar biosynthesis; cell-distal portion of basal-body rod
           [Pseudoalteromonas haloplanktis TAC125]
          Length = 262

 Score =  165 bits (416), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 43/262 (16%), Positives = 93/262 (35%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +  I      A +  +S +++N++N  TVG++  +  F +++    N    +     
Sbjct: 1   MNPALWISKTGLDAQQTDISVISNNLANASTVGYKKSRAVFEDLLYQNINQPGGRSSQDT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    +         +   G+ ++T   LD+ + G  +F +  P   I  +R+G+F
Sbjct: 61  EMPSGLMLGAGAKVVANQKNFSQGNMLTTENSLDWMISGSGFFEVLQPDGNIAYSRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI--SQKGKVIATMGLYSVD 164
               DG +V++   Y V    +VP          +      +       VI  + +    
Sbjct: 121 TTDGDGRVVTSGAGYVVQPEMNVPDDAQSITVSQDGEVSVRVAGQADNVVIGQITISDFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +  +           +       T+ +G LE SN N   E+  +I   + 
Sbjct: 181 NPSGLEPIGQNLYTETAVSGAPVQGNPGVDGLGTIIQGSLETSNVNVTEELVNLIETQRV 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   ++ M    + +
Sbjct: 241 YEMNSKVISAVDEMMSYINQQL 262


>gi|325529016|gb|EGD06029.1| flagellar basal body rod protein FlgG [Burkholderia sp. TJI49]
          Length = 262

 Score =  165 bits (416), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 47/259 (18%), Positives = 90/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A + ++  +++N++N  T GF+  +  F +++               
Sbjct: 1   MNRSLYIAATGMNAQQAQMDVISNNLANVSTNGFKGSRAGFEDLLYQTIRQPGANSTQQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           GS   TG   D A+ G  +F +  P G    TRDG F
Sbjct: 61  ELPSGLQLGTGVQQVATERLYTQGSLTQTGNSKDVAINGAGFFQVLMPDGTNAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +    G LV++SG   +  +            +   V      S     I ++ + +   
Sbjct: 121 QTNAQGQLVTSSGYQILPAITVPQNATSLTIGKDGVVSVTQPGSSNAVQIGSLQIATFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   R  +  S                   T+ +G++E SN N + E+  MI   + +
Sbjct: 181 PAGLEARGENLFSETTSSGAPNVSQPGLNGAGTLNQGYVEASNVNVVQELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ +    +
Sbjct: 241 EINSKAVTTSDQMLQTVTQ 259


>gi|145297456|ref|YP_001140297.1| lateral flagellar basal-body rod protein LfgG [Aeromonas
           salmonicida subsp. salmonicida A449]
 gi|142850228|gb|ABO88549.1| lateral flagellar basal-body rod protein LfgG [Aeromonas
           salmonicida subsp. salmonicida A449]
          Length = 261

 Score =  165 bits (416), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 43/261 (16%), Positives = 94/261 (36%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  +      A + +++++++N++N +TVGF+  +V F ++   ++           
Sbjct: 1   MHAALWVSKTGLSAQDAKMASISNNLANVNTVGFKRDRVAFEDLFYQVQRQPGAQQDQQN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G F +T  ELD A+ G  +F +E P      TR+G++
Sbjct: 61  LSPIGIQMGNGVRVVGTQKVFTPGQFQNTNQELDMAVVGAGFFGVERPDGETAYTRNGQW 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165
               +G LV++ G   +  +                        Q+   +  + L +   
Sbjct: 121 HRNAEGLLVNSDGLPMLPQIQIPDNATKVSIGTDGTVSATLPGQQENVELGRITLTNFTN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +            +      +   +K+  LE SN N + EM  MI   + +
Sbjct: 181 PAGLEALGGNLYRATGASGEAIEGVPGEEAMGAIKQFTLESSNVNVVEEMVDMITTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
                ++   ++ +    + +
Sbjct: 241 EMNAKVVSAADQMLKFVTQAL 261


>gi|254251193|ref|ZP_04944511.1| flagellar basal-body rod protein [Burkholderia dolosa AUO158]
 gi|124893802|gb|EAY67682.1| flagellar basal-body rod protein [Burkholderia dolosa AUO158]
          Length = 262

 Score =  165 bits (416), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 90/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A + ++  +++N++NT T GF+  +  F +++               
Sbjct: 1   MNRSLYIAATGMNAQQAQMDVISNNLANTSTNGFKASRAVFEDLLYQTIRQPGANSTQQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           G    TG   D A+ G  +F +  P G    TRDG F
Sbjct: 61  ELPSGLQLGTGVQQVATERLYTQGGLTQTGNSKDVAINGAGFFQVLMPDGTNAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +    G LV++SG   +  +            +   V      S     I ++ + +   
Sbjct: 121 QTNAQGQLVTSSGYQILPAITVPQNATSLTIGKDGVVSVTQPGSNNAVQIGSLQIATFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   +  +  +                   T+ +G++E SN N + E+  MI   + +
Sbjct: 181 PAGLEAKGENLFAETTSSGAPNVSQPGLNGAGTLNQGYVEASNVNVVQELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ +    +
Sbjct: 241 EINSKAVTTSDQMLQTVTQ 259


>gi|169831888|ref|YP_001717870.1| flagellar basal body rod protein [Candidatus Desulforudis
           audaxviator MP104C]
 gi|169638732|gb|ACA60238.1| flagellar basal body rod protein [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 246

 Score =  165 bits (416), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 54/250 (21%), Positives = 96/250 (38%), Gaps = 13/250 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN-------DID 53
           M        +  LA + RL  VA N++N +T GFR     F+  +             I 
Sbjct: 1   MIRGVYTAASGMLAGQTRLDAVAHNIANVNTTGFRRQVPVFAPYLQTAVGRHEKRVTPIG 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113
                            G  + TG  +D ALEG+ +F +E     + TR G FKV   G 
Sbjct: 61  TTSLGTVPTALVTDLTGGPVVQTGRTMDLALEGEGFFTVEREGQQLYTRAGSFKVDASGI 120

Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRE 173
           LV+ +G  PVL              +   G     S  G+ +  + L ++   + +VR  
Sbjct: 121 LVTRAGD-PVLGERGPLKVGHDGFTVSADGR--VFSSTGEELDRLRLTALPGRETWVRTP 177

Query: 174 NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           +  +       P  +     V +G+LE SN +   E+  ++  ++ + +   +    +  
Sbjct: 178 DGYLMTGEATAPAIN---TRVHQGYLEGSNVHLAVELVDLLLASRLYAANQRVARTQDTL 234

Query: 234 MLEAIRNIAS 243
           + +AI  + +
Sbjct: 235 VEKAINQVGA 244


>gi|258622490|ref|ZP_05717512.1| Putative flagellar basal-body rod protein flgG [Vibrio mimicus
           VM573]
 gi|258625232|ref|ZP_05720144.1| Putative flagellar basal-body rod protein flgG [Vibrio mimicus
           VM603]
 gi|258582479|gb|EEW07316.1| Putative flagellar basal-body rod protein flgG [Vibrio mimicus
           VM603]
 gi|258585190|gb|EEW09917.1| Putative flagellar basal-body rod protein flgG [Vibrio mimicus
           VM573]
          Length = 261

 Score =  164 bits (415), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 45/261 (17%), Positives = 96/261 (36%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M ++  +      A + +++ +++N++N +T GF+  +V F ++   I+           
Sbjct: 1   MHSALWVSKTGMAAQDTKMTAISNNLANVNTAGFKRDRVVFEDLFYNIQRQPGAQVDQVN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106
                 Q  S V           G+  +T  ELD A+ G  +F +E+    I+ TR+G+F
Sbjct: 61  ELPTGVQLGSGVRVVGTQKVFTQGNAQNTAQELDLAVMGQGFFQIENSDGQIMYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
            V  +G +V++ G      +      +     +   V          + +  + L     
Sbjct: 121 HVNSEGLMVNSQGLPLEPQIQIPDNVVSLSIGVDGTVSATTAGDPAPQQLGQITLAKFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +           E          ++K+G LE SN   + EM  MI   + +
Sbjct: 181 PAGLEAVGGNLFRETDASGLAEELVAGQDGTGSIKQGALEGSNVQVVEEMVDMITTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
                ++   +  +    +++
Sbjct: 241 EMNAKVVSATDDMLKFVAQSV 261


>gi|188534168|ref|YP_001907965.1| Flagellar basal-body rod protein [Erwinia tasmaniensis Et1/99]
 gi|188029210|emb|CAO97082.1| Flagellar basal-body rod protein [Erwinia tasmaniensis Et1/99]
          Length = 260

 Score =  164 bits (415), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 88/259 (33%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A +  +  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLMYQTMRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  +             G+   T +  D A+ G  +F+++ P      TRDG F
Sbjct: 61  TLPSGLQIGTGTRPVATERLHNQGNLSQTDSSKDVAINGQGFFSVQMPDGTTAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQI-PQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +   +G LV+ +G      +   P  +         V    +       +  + L +   
Sbjct: 121 QTDQNGQLVTNAGFPVQPAIVIPPNSLSMTISRDGVVSVTQQGQANPVQVGQLTLSTFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +            + +       T+ +G++E SN N   E+  MI   + +
Sbjct: 181 DAGLSSMGENLYQETQASGAPNESNPGNNGAGTLYQGYVETSNVNVAEELVSMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  I  +++ + +  +
Sbjct: 241 EINSKAISTSDQMLAKLTQ 259


>gi|90418392|ref|ZP_01226304.1| basal body rod protein flgG [Aurantimonas manganoxydans SI85-9A1]
 gi|90338064|gb|EAS51715.1| basal body rod protein flgG [Aurantimonas manganoxydans SI85-9A1]
          Length = 262

 Score =  164 bits (415), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 95/253 (37%), Gaps = 21/253 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----------- 50
             +  I      A +  +  +A+N++N +T GF+  + +F++++  ++            
Sbjct: 1   MRALAIAATGMNAQQTNVEVIANNIANINTTGFKRARAEFTDLLYQVERAQGVAARGGQG 60

Query: 51  ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP-RGIILTRDGRF 106
              +  Q                G+   TG +LD AL G+ WF ++ P   I+ TRDG F
Sbjct: 61  VVPEGAQLGLGTRLAAIRNLHIQGTLNQTGNKLDLALNGEGWFQVQGPGGEILYTRDGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE-KGEISQKGKVIATMGLYSVDM 165
               DG LV+  G      +                   +   +   + +  + L +   
Sbjct: 121 NTNGDGQLVTLDGLLVDPAITMPANTSEVIVNESGQVFARVGGAADLEELGQLTLATFAN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
           + G   +  +     I                T+++G+LEDSN + + E+ ++I   + +
Sbjct: 181 NAGLAAQGGNLFRETIASGAPTAGVPGDEGYATLQQGYLEDSNVDPVKEISELISAQRAY 240

Query: 221 NSITTLIDENEKS 233
              + +I   ++ 
Sbjct: 241 EMNSKVISAADEM 253


>gi|170741836|ref|YP_001770491.1| flagellar basal body rod protein FlgG [Methylobacterium sp. 4-46]
 gi|168196110|gb|ACA18057.1| flagellar basal-body rod protein FlgG [Methylobacterium sp. 4-46]
          Length = 262

 Score =  164 bits (415), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 42/256 (16%), Positives = 88/256 (34%), Gaps = 21/256 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55
             +  I      A +  L  +A+N++N +T GF+  + +F++++   +            
Sbjct: 1   MRALAIAATGMNAQQLNLEVIANNVANLNTTGFKGARAEFTDLLYQAERQQGVPNQTGQE 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                      V +         G    T   LD A+ G  +F + +P G +  TR G F
Sbjct: 61  AVPEGALLGLGVRAAAIRNLHRQGPLAQTSNNLDLAINGRGYFQVTNPNGEVNYTRAGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIP-QKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
             +  G LV+  G      +      +    ++   V  K +     +++  + + +   
Sbjct: 121 NKSSTGQLVTLEGYVVEPAILFPANTVDVVINQSGQVYAKVDGQATPQLLGQLSIANFAN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     N                        V++G+LE SN + + E+  +I   + F
Sbjct: 181 ESGLEPLGNGLYRETAASGAPVTGVAGDTGFGKVQQGYLESSNVDPVKEITSLITAQRAF 240

Query: 221 NSITTLIDENEKSMLE 236
              + +I   ++    
Sbjct: 241 EMNSKVIQAADEMAGT 256


>gi|119953550|ref|YP_945760.1| flagellar basal-body rod protein FlgF [Borrelia turicatae 91E135]
 gi|119862321|gb|AAX18089.1| flagellar basal-body rod protein FlgF [Borrelia turicatae 91E135]
          Length = 286

 Score =  164 bits (415), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 50/278 (17%), Positives = 103/278 (37%), Gaps = 38/278 (13%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKND-------- 51
                  +  +A   RL  +A+N++N D  G++        F E++    ND        
Sbjct: 7   RGIYTAASGMMAQRHRLDVIANNLANIDLTGYKKDLSVQKAFPEMLIRRINDDGLYKFPK 66

Query: 52  --------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103
                   I +  + V   + Y S E G    TG  LD AL  + +F +++P G   TR+
Sbjct: 67  GYLETAPVIGKLGTGVEENEIYTSFEQGPLKITGNPLDLALTDEGFFVVQTPEGERYTRN 126

Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV--------- 154
           G F +  +G L++  G   + +   + ++                + +            
Sbjct: 127 GSFILGAEGILMTKDGYPVIGEKGYIYLKDNNFKITAQGQIFHNSTFERNPKKLVSEYEN 186

Query: 155 -------IATMGLYSVDMSQGFVRRENSGISPNI---PPTPLEDLSGVTVKRGFLEDSNA 204
                  +  + + + + ++   ++ +S  +          +E  S   ++ G LE SN 
Sbjct: 187 SWENYELLDNLKIVNFEKTRFLQKQGSSLWNSTEISGQARNIEINSRPKIETGTLEGSNV 246

Query: 205 NSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           N++ EM  MI + + + +    I   +  + + I  I 
Sbjct: 247 NAINEMVSMITVNRAYEANQKTIQTEDSLLGKLINEIG 284


>gi|295678056|ref|YP_003606580.1| flagellar basal-body rod protein FlgG [Burkholderia sp. CCGE1002]
 gi|295437899|gb|ADG17069.1| flagellar basal-body rod protein FlgG [Burkholderia sp. CCGE1002]
          Length = 262

 Score =  164 bits (415), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 91/259 (35%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A + ++  +++N++N  T GF+  +  F +++               
Sbjct: 1   MNRSLYIAATGMNAQQAQMDVISNNLANVSTNGFKGSRAVFEDLLYQTIRQPGANSTQQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+   TG   D A+ G  +F ++ P      TRDG F
Sbjct: 61  ELPSGIQLGTGVQQVATERLYTQGNLQQTGNSKDVAINGAGFFQVQMPDGQTAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           +    G LV++SG   +  +               +V      S   + + TM L +   
Sbjct: 121 QTNAQGQLVTSSGYQVIPAITIPANATSLTIGSDGSVSITVAGSSNTQQLGTMQLATFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   +  +  +                   T+ +G++E SN N + E+  MI   + +
Sbjct: 181 PAGLDSKGENLFAETASSGAPNVAQPGLNGAGTLNQGYVEASNVNVVQELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ +    +
Sbjct: 241 EINSKAVTTSDQMLQTLSQ 259


>gi|170748107|ref|YP_001754367.1| flagellar basal body rod protein FlgG [Methylobacterium
           radiotolerans JCM 2831]
 gi|170654629|gb|ACB23684.1| flagellar basal-body rod protein FlgG [Methylobacterium
           radiotolerans JCM 2831]
          Length = 262

 Score =  164 bits (415), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 50/257 (19%), Positives = 88/257 (34%), Gaps = 21/257 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS---- 57
             +  I      A +  +  +A+N+SN +T  F+  + +F +++   +      I     
Sbjct: 1   MRALAIAATGMNAQQLNVEVIANNISNLNTTAFKAARAEFKDLIYQAERPAGVPIQAGES 60

Query: 58  ----------FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                      V +         G   +T   LD A+ G  WF +  P G I  TR G F
Sbjct: 61  AIPEGAMLGLGVRNTAIRNLHRQGPLNNTTNPLDLAINGRGWFQVTMPNGEINYTRAGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQ-KDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
               DG LV+A G      +      I    +E   V  K +  Q  + I  + L +   
Sbjct: 121 NKNADGRLVTAEGYSVDPAIIIPQNAIDVVINETGQVMVKVDGQQLPQTIGQLQLANFTN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     N                        +++G+LE SN + + E+  +I   + F
Sbjct: 181 DAGLEPLGNGLYRETAASGLPVTGFAADPGFGKIQQGYLETSNVDPVREITNLISAQRAF 240

Query: 221 NSITTLIDENEKSMLEA 237
              + +I   ++     
Sbjct: 241 EMNSKVIQAADEMAGTI 257


>gi|42522134|ref|NP_967514.1| flagellar basal-body rod protein FlgG [Bdellovibrio bacteriovorus
           HD100]
 gi|39574665|emb|CAE78507.1| flagellar basal-body rod protein FlgG [Bdellovibrio bacteriovorus
           HD100]
          Length = 261

 Score =  164 bits (415), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 45/262 (17%), Positives = 90/262 (34%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S N       A +  +  +A+N++N  T GF+  + +F +++   + +         
Sbjct: 1   MLKSLNTAATGMAAQQTNMDVIANNIANVSTAGFKRSRAEFEDLMYQTQKEPGTASGLNA 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRF 106
                 Q    V +         G    T   LD  +EG  +F +  +      TRDG F
Sbjct: 61  YSPNGVQVGLGVRTAGVQKDFAGGQAQITKNPLDLQIEGSGFFQVLTADGETAYTRDGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQKGKVIATMGLYSVDM 165
           K   +G LV  +G     ++         +             +   + I  + + +   
Sbjct: 121 KKDPNGRLVDKNGNTLQPEITVPANVSGIEVAPTGEVRVITGLNDVPQTIGQIDVVNFVN 180

Query: 166 SQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +  +                    + +G LE SN N + EM  MI   +  
Sbjct: 181 PAGLKAMGKNLFTQTPSSGQAIASRPGLNGTGYLAQGQLESSNVNIVDEMVNMITAQRAM 240

Query: 221 NSITTLIDENEKSMLEAIRNIA 242
            + + ++  +++ + +AI N+ 
Sbjct: 241 ETNSKVMQASDQML-QAINNLR 261


>gi|73539452|ref|YP_299819.1| flagellar basal body rod protein FlgG [Ralstonia eutropha JMP134]
 gi|72122789|gb|AAZ64975.1| Protein of unknown function DUF1078 [Ralstonia eutropha JMP134]
          Length = 261

 Score =  164 bits (415), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 85/259 (32%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A + ++  +++N++N  T GF+  +  F +++               
Sbjct: 1   MIRSLWIAKTGLDAQQTQMDVISNNLANVSTNGFKRGRAVFEDLMYQNIRQPGALSSDQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+   TG   D A+ G  +F +  P      TRDG F
Sbjct: 61  TLPSGLQLGTGVRPVATERIHTQGNPQQTGNSKDVAIIGQGFFQVAMPDGTTAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQI-PQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V  +G LV++SG      +                V      S     +  + L +   
Sbjct: 121 QVDQNGQLVTSSGFVIQPAITIPANTTSMTVARDGTVSVTQPGSSNNVQVGQLQLATFMN 180

Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +                       +++ ++E SN N + E+  MI   + +
Sbjct: 181 PAGLESMGENLYVQTDASGAPNTTVPGLNGAGVLQQNYVEASNVNVVEELVSMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ +    +
Sbjct: 241 EINSKAVQTSDQMLQRLTQ 259


>gi|23015788|ref|ZP_00055555.1| COG4786: Flagellar basal body rod protein [Magnetospirillum
           magnetotacticum MS-1]
          Length = 261

 Score =  164 bits (415), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 50/261 (19%), Positives = 105/261 (40%), Gaps = 22/261 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             S NI     LA +  +  +++N++N +T  F   + +F++++      +         
Sbjct: 1   MRSLNIAATGMLAQQTNVEVISNNIANMNTTAFTRRRPEFADLLYQNLRRVGSQSSDTGT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q    V +   Y   E GS  ST   LD A++G  +F ++ P      TRDG F
Sbjct: 61  IVPTGVQLGLGVKTTAVYRITEQGSVQSTDNTLDMAVQGKGYFQIKLPSGETAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           +++ +G++V+  G   +  +      +    +    V  K +   + ++   + L +   
Sbjct: 121 QLSPEGTIVTHEGYQVIPQVTIPSDAVGVTVDSTGQVIVKQDGQVQSQIKGQLTLATFAN 180

Query: 166 SQGFVRRENSG-ISPNIPPTPLEDLS----GVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   R  +  +       P+          T+ +GFLE SN N + E+  +I   + +
Sbjct: 181 DAGLEARGGNLFMETPASGQPVVQTPGKPGFGTILQGFLETSNVNVVAEVTNLIGAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
              + +I  +++ +   I  +
Sbjct: 241 EMNSKVIQASDEML-STINQM 260


>gi|27904804|ref|NP_777930.1| flagellar basal-body rod protein FlgG [Buchnera aphidicola str. Bp
           (Baizongia pistaciae)]
 gi|38372207|sp|Q89AH7|FLGG_BUCBP RecName: Full=Flagellar basal-body rod protein flgG; AltName:
           Full=Distal rod protein
 gi|27904202|gb|AAO27035.1| flagellar basal-body rod protein FlgG [Buchnera aphidicola str. Bp
           (Baizongia pistaciae)]
          Length = 260

 Score =  164 bits (415), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 41/257 (15%), Positives = 89/257 (34%), Gaps = 20/257 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  I      A +  ++ +A+N++N +T GF+  K  F +++               
Sbjct: 1   MIPALWIAKTGLDAQQINMNVIANNLANVNTNGFKRSKAIFEDLIYHTVQQPGSKSSEET 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           G+   T +  D A+ G+ +F ++ P G    TRDG F
Sbjct: 61  ISPSGFQLGTGVRPITTEREHSQGNLSKTNSLKDVAINGNGFFQVQLPDGNAAYTRDGSF 120

Query: 107 KVTDDGSLVSASGK-YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           ++  +G LV+ +G     +                 +  +     +   +  + L +   
Sbjct: 121 QINPNGQLVTNNGFLIQPVINFPANGNNMSVSRDGIITVRIPEQTQPIRVGKLYLANFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +              S  +     + + ++E SN N   E+  MI   + +
Sbjct: 181 DSGLSNIGENLYQETEASGNPSISSPGSHGTGLLYQSYVETSNVNIAEELVNMIQAQRAY 240

Query: 221 NSITTLIDENEKSMLEA 237
              + +I   ++ + + 
Sbjct: 241 EINSKVITTADQMLQKL 257


>gi|46205476|ref|ZP_00048498.2| COG4786: Flagellar basal body rod protein [Magnetospirillum
           magnetotacticum MS-1]
          Length = 241

 Score =  164 bits (415), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 75/242 (30%), Positives = 135/242 (55%), Gaps = 4/242 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           MQ S  + L++Q+ALE+RL+T A+N++N  T GFR  +V FSE++          ++FV 
Sbjct: 1   MQNSLYVALSSQIALEKRLTTTANNVANMATAGFRAEEVSFSELLAKSSRG---DVAFVD 57

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           +GK  LS+  G    T + LD A++GDAW  ++ P+G + TRDGR  +  +G L +  G 
Sbjct: 58  AGKTALSRVAGPTTKTDSALDVAVQGDAWLGVKGPKGTLYTRDGRLTMDANGQLRTV-GG 116

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
            PV+D    P+ +  +     +G  G I Q    +  +GL+++D      R   + ++ +
Sbjct: 117 LPVVDPGGGPLLLDPQAGPPVIGRDGSIHQGVNQVGALGLFTLDPKAKLTRSGENAVAAS 176

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
           +P  P++D + + + +G++E +N N + EM ++I + + F S  T+  E E ++  A++ 
Sbjct: 177 MPGQPVQDFTRLGIVQGYIEGANVNPILEMTKLIAIQRAFESAATMTSEAENTLTGAVKT 236

Query: 241 IA 242
             
Sbjct: 237 XG 238


>gi|253573527|ref|ZP_04850870.1| flagellar basal body rod protein FlgG [Paenibacillus sp. oral taxon
           786 str. D14]
 gi|251847055|gb|EES75060.1| flagellar basal body rod protein FlgG [Paenibacillus sp. oral taxon
           786 str. D14]
          Length = 274

 Score =  164 bits (415), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 48/271 (17%), Positives = 95/271 (35%), Gaps = 32/271 (11%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++     + +L  + +N++N +TVGF++ +V F +++    + +        
Sbjct: 1   MLRSMYSGVSGMRGFQTKLDVIGNNIANVNTVGFKSGRVMFKDIMSQTVSGVTAPVDGES 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI---ILTRDG 104
                 Q    V+ G        GS ++T   LD  ++GD +F ++         LTR G
Sbjct: 61  GGVNAKQIGLGVSIGSIDTLHTGGSAMTTNNPLDMRIDGDGFFLVKLTPDQEVPFLTRAG 120

Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM------ 158
            F +   G LV++ G         V   I  +                            
Sbjct: 121 DFHLDAAGQLVTSDGLLVCNSDGDVMEPIDFEAVTAFTIASDGTMMLKNPEGGTDPGEII 180

Query: 159 GLYSVDMSQGFVRRENSGISPNIP----------PTPLEDLSGVTVKRGFLEDSNANSMY 208
           G+  V   +G  +   +     +                +     +  G LE SN +   
Sbjct: 181 GVARVTNPEGLEKIGGNLYRVTLNAIADGELTYTNPNNAEEGTGALIVGQLEMSNVDLTG 240

Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           E  +MI   + F + + +I  +++ + E + 
Sbjct: 241 EFTEMIVAQRGFQANSRIITTSDEVLQEVVN 271


>gi|222084859|ref|YP_002543388.1| flagellar basal-body rod protein [Agrobacterium radiobacter K84]
 gi|221722307|gb|ACM25463.1| flagellar basal-body rod protein [Agrobacterium radiobacter K84]
          Length = 244

 Score =  164 bits (415), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 107/242 (44%), Positives = 165/242 (68%), Gaps = 1/242 (0%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           MQ+   + L++Q+ALE+RL+TVADNM+N +T GFR  +VKF++V+   +N ++ K++FV+
Sbjct: 1   MQSGIYVSLSSQMALERRLTTVADNMANVNTTGFRGTEVKFNQVLSNTENKLNAKVAFVS 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
            G +YLS   G   +TG  LDFA++G+AWF L +P G++LTRDGRF +TD G+LVSA G 
Sbjct: 61  QGNDYLSTSNGELQNTGNLLDFAVKGEAWFGLNTPAGLVLTRDGRFTMTDSGALVSARGY 120

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
            PVLD    PIQ+        V   G I+Q  K +  +GLY+ D+S+GF+R  NSG+ P 
Sbjct: 121 -PVLDPGGAPIQLDPTGGAPTVSSNGTITQNDKQVGQIGLYTSDVSKGFLRYNNSGVLPT 179

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
             P P+ D S + V +G+LE+SN N + EM ++I +++ F++IT+L + +E ++ EAI+ 
Sbjct: 180 DTPQPVIDRSNIGVAQGYLENSNVNGLREMTELIEVSRAFDNITSLTNSSESTLSEAIKT 239

Query: 241 IA 242
           + 
Sbjct: 240 LG 241


>gi|78221652|ref|YP_383399.1| flagellar basal body rod protein FlgG [Geobacter metallireducens
           GS-15]
 gi|78192907|gb|ABB30674.1| Flagellar basal-body rod FlgG [Geobacter metallireducens GS-15]
          Length = 262

 Score =  164 bits (415), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 46/257 (17%), Positives = 88/257 (34%), Gaps = 20/257 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +     +   A +  +  VA+N++N +T GF+  +  F +++               
Sbjct: 1   MIRALWTAASGMQAQQTNIDVVANNLANVNTAGFKKSRADFQDLMYQNMKTTGSPSTNTT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q               +G+   TG ELD A+EGD ++ ++ P      TR G F
Sbjct: 61  QVPSGIQIGLGAKLAAVTKIFTIGNINQTGNELDMAIEGDGFYQIQMPDGTTTYTRSGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           K    G +V++ G   + ++                V       +    +  + L     
Sbjct: 121 KRDSQGRVVTSDGYPLIPEIVIPNNATAINIGNDGTVSVSQAGQKSPTNVGNIQLAMFSN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G +    +    +         +       T  +GFLE SN + M EM  MI   + +
Sbjct: 181 PSGLLAIGKNLFQESDSSGNATTGTPGQNGLGTTAQGFLEMSNVSVMEEMVNMITGQRAY 240

Query: 221 NSITTLIDENEKSMLEA 237
              +  +   ++ +  A
Sbjct: 241 EVNSKAVQTADEMLQTA 257


>gi|306820920|ref|ZP_07454540.1| flagellar basal-body rod protein FlgG [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304551034|gb|EFM39005.1| flagellar basal-body rod protein FlgG [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 270

 Score =  164 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 51/269 (18%), Positives = 102/269 (37%), Gaps = 30/269 (11%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             +     +   A +  +  +++N+SN +T GF+  K +F +++    N +         
Sbjct: 1   MRALWTAASGMKAQQLNVDVISNNISNVNTTGFKAQKTEFKDLLYTYSNPVSNEAKMGQP 60

Query: 54  ---QKISFVASGKEYLSKEVGSFISTGTELDFAL-EGDAWFALESPRGI------ILTRD 103
              Q    V           GS   T    D A+ +G+A+F +E P         + TRD
Sbjct: 61  VNLQVGHGVMPVATSRIYTTGSADKTDNPTDLAMVQGNAFFVVEDPNAPGEEAKRLYTRD 120

Query: 104 GRFKVTDDGSLVS--ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK-----VIA 156
           G FK + + + ++   S    VL      +QIP+  + F V + G ++ K        + 
Sbjct: 121 GSFKFSVEDNQLTLVTSQGEKVLTTDDGYVQIPENSKDFAVSQNGTVTAKSAEGELLELG 180

Query: 157 TMGLYSVDMSQGFVRRENSGISPNI----PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQ 212
            +   +    +G     ++   P      P     +     + +G+LE SN   + EM +
Sbjct: 181 QLKTVTFVNPEGLKAVGSNFYVPTDNSGEPVQEENETRESKIYQGYLEMSNVQLVDEMVR 240

Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           MI   + +   +  +   +  +   I  +
Sbjct: 241 MITAQRAYEINSKTVQTADDML-NTINQL 268


>gi|107023951|ref|YP_622278.1| flagellar basal body rod protein FlgG [Burkholderia cenocepacia AU
           1054]
 gi|105894140|gb|ABF77305.1| Flagellar basal-body rod FlgG [Burkholderia cenocepacia AU 1054]
          Length = 262

 Score =  164 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 90/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I  A   A + ++  +++N++NT T GF+  +  F +++               
Sbjct: 1   MNRSLYIAAAGMNAQQAQMDVISNNLANTSTNGFKASRAVFEDLLYQTIRQPGANSTQQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           G    TG   D A+ G  +F +  P G    TRDG F
Sbjct: 61  ELPSGLQLGTGVQQVATERLYTQGGLTQTGNSKDVAINGAGFFQVLMPDGTNAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +    G LV++SG   +  +            +   V      S     I ++ + +   
Sbjct: 121 QTNAQGQLVTSSGYQVLPAITVPQNAQSLTIGKDGVVSVTQPGSSNAVQIGSLQIATFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   +  +  +                    + +G++E SN N + E+  MI   + +
Sbjct: 181 PTGLEAKGENLFAETTSSGAPNVSQPGLNGAGVLNQGYVEASNVNVVQELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ +    +
Sbjct: 241 EINSKAVTTSDQMLQTVTQ 259


>gi|157165544|ref|YP_001467096.1| flagellar basal body rod protein FlgG [Campylobacter concisus
           13826]
 gi|112799947|gb|EAT97291.1| flagellar basal-body rod protein FlgG [Campylobacter concisus
           13826]
          Length = 262

 Score =  164 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 40/261 (15%), Positives = 91/261 (34%), Gaps = 21/261 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S        +A + ++   + N++N +T G++  + +F++++  +            
Sbjct: 1   MMRSLYTAATGMIAEQTQIDVTSHNIANVNTYGYKKNRAEFADLMYQVMEYAGTATSQTT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                      V           G F  T   LD  + G+ +F ++ P      TR+G F
Sbjct: 61  TSPTGIEVGLGVRPTAINKIFSQGYFKETSNNLDMVIAGNGFFQIQLPDGTTAYTRNGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           K+  +G++V++ G   +  +                V            I  + L +   
Sbjct: 121 KLDANGTIVNSDGYQLIPQITVPANATQISIGTDGTVSVLQAGETDMAQIGQIELANFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++          +           T+++GF+E SN   + EM  +I   + +
Sbjct: 181 PAGLHSMGDNNYLQTSASGDVVVGVAGLDGLGTIRQGFVEMSNVQLVEEMTDLITGQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
            + +  I  ++  + E +  +
Sbjct: 241 EANSKAITTSDSML-EIVNGL 260


>gi|15595120|ref|NP_212909.1| flagellar hook-basal body complex protein (flhO) [Borrelia
           burgdorferi B31]
 gi|2688723|gb|AAC67131.1| flagellar hook-basal body complex protein (flhO) [Borrelia
           burgdorferi B31]
          Length = 300

 Score =  164 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 48/278 (17%), Positives = 104/278 (37%), Gaps = 38/278 (13%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND-------- 51
                  +  +A  ++L TV++N++N D +G++        F E++    ND        
Sbjct: 21  RGIYTAASGMMAERRKLDTVSNNLANIDLIGYKKDLSIQKAFPEMLIRRLNDDGLYKFPK 80

Query: 52  --------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103
                   + +  + V   + Y   E G   +TG  LD AL    +F +++  G   TR+
Sbjct: 81  GHLETAPVVGKIGTGVEENEIYTVFEQGPLKTTGNPLDLALTDQGFFVIQTSDGERYTRN 140

Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI--------------- 148
           G F +  +G LV+ SG   + +   + ++                               
Sbjct: 141 GSFTIGKEGILVTKSGFPVLGEKGYIYLKKNNFKITPQGQVFHNSNFESDPKRLVSEYEN 200

Query: 149 -SQKGKVIATMGLYSVDMSQGFVRRENSGIS---PNIPPTPLEDLSGVTVKRGFLEDSNA 204
             +  +++ T+ + + +  +   ++ NS       +     ++      ++   LE SN 
Sbjct: 201 SWENYELLDTIRIVNFENPRFLKKQGNSLWIDTKTSGKAQEIDISLRPKIETETLEASNV 260

Query: 205 NSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           N++ EM  MI + + + +    I   +  + + I  I 
Sbjct: 261 NAVKEMVLMIEINRAYEANQKTIQTEDSLLGKLINEIG 298


>gi|89092138|ref|ZP_01165093.1| flagellar basal-body rod protein FlgG [Oceanospirillum sp. MED92]
 gi|89083873|gb|EAR63090.1| flagellar basal-body rod protein FlgG [Oceanospirillum sp. MED92]
          Length = 261

 Score =  164 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 43/261 (16%), Positives = 84/261 (32%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  + N+      A +  L  +++N++N  TVGF+   V F +++  I+           
Sbjct: 1   MHGALNVAKTGMTAQDTNLKVISNNLANVSTVGFKKDAVVFEDLMYQIRRQPGAQTAEEA 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q    V +         G    T    D A+ G  +  +  P      TR+G+ 
Sbjct: 61  QLPSGLQVGLGVRTVGTQKLFGTGEIEITEEAFDVAINGRGFLQVTLPNGDTAYTRNGQL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
            +  D  LV+  G      +      +         V      +     I  + +     
Sbjct: 121 HLNADNELVTPEGYQINPAITLPGEVVNFSISTDGVVEVVTAGNNTPTQIGQLQMADFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
            QG      +              +        + +G LE SN NS+ E+  MI   + +
Sbjct: 181 PQGLQSLGQNLYQETGASGAPIISNPGENGTGILVQGALEGSNVNSVQELVDMITTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
              + +I   ++ +    + +
Sbjct: 241 EMNSKVISTADEMLSYVSQQL 261


>gi|134297196|ref|YP_001120931.1| flagellar basal body rod protein FlgG [Burkholderia vietnamiensis
           G4]
 gi|134140353|gb|ABO56096.1| flagellar basal-body rod protein FlgG [Burkholderia vietnamiensis
           G4]
          Length = 262

 Score =  164 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 89/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A + ++  +++N++NT T GF+  +  F +++               
Sbjct: 1   MNRSLYIAATGMNAQQAQMDVISNNLANTSTNGFKASRAVFEDLLYQTIRQPGANSTQQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           G    TG   D A+ G  +F +  P G    TRDG F
Sbjct: 61  ELPSGLQLGTGVQQVATERLYTQGGLTQTGNSKDVAINGAGFFQVLMPDGTNAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +    G LV++SG   +  +            +   V      S     I ++ + +   
Sbjct: 121 QTNAQGQLVTSSGYQILPAITVPQNAQSLTIGKDGVVSVTQPGSNNAVQIGSLQIATFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   +  +  +                    + +G++E SN N + E+  MI   + +
Sbjct: 181 PAGLEAKGENLFAETTSSGAPNVSQPGLNGAGVLNQGYVEASNVNVVQELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ +    +
Sbjct: 241 EINSKAVTTSDQMLQTVTQ 259


>gi|319409192|emb|CBI82836.1| Flagellar basal-body rod protein flgF [Bartonella schoenbuchensis
           R1]
          Length = 244

 Score =  164 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 73/242 (30%), Positives = 133/242 (54%), Gaps = 1/242 (0%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           MQ    +G++ Q++L +R+ T+A NM+N +T GFR   +KF  +V  +  +   ++ F +
Sbjct: 1   MQNPIYVGVSGQISLARRMETIAQNMANVNTPGFRAGGMKFDTLVSPVAREQRDQVVFAS 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           +GK Y+S + G+ + TG  LD A+ GD++F++++  G + TRDGR  +T +G LVS +G 
Sbjct: 61  AGKGYISTDRGALVKTGNALDVAVGGDSYFSMQASFGPVYTRDGRMIMTPEGGLVSVTG- 119

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
            P LD    PIQ+        +   G I QK  ++  +GL+            N+ + P+
Sbjct: 120 LPFLDDGGAPIQLNPAGGTPRISADGSIYQKDVLVGKIGLFQFQKGTQLRYGPNASVIPD 179

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
            P    E   G  V +G++E SN N + EM ++I +++ F  +  ++ + E+   ++I+ 
Sbjct: 180 RPAMQSEGGIGDKVVQGYIESSNVNGVSEMTRLIEVSRAFERVEAMLRQQEEMRSKSIQI 239

Query: 241 IA 242
           + 
Sbjct: 240 LG 241


>gi|159045791|ref|YP_001534585.1| flagellar basal body rod protein FlgF [Dinoroseobacter shibae DFL
           12]
 gi|157913551|gb|ABV94984.1| flagellar basal-body rod protein FlgF [Dinoroseobacter shibae DFL
           12]
          Length = 238

 Score =  164 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 70/242 (28%), Positives = 117/242 (48%), Gaps = 5/242 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    L+ Q AL++ ++ +A+N++N  T G+R   + FSE V A  +     IS   
Sbjct: 1   MDATQYTALSRQNALKREMTVIANNIANISTTGYRAEGLVFSEYVQATGHG-QASISMTD 59

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           SG +  +   G    TG   D A+EGD +F + +P G+ LTR G F+   +G LV+  G 
Sbjct: 60  SGAKITNYSQGMLRQTGGSFDMAIEGDGFFQVAAPEGVRLTRAGAFEPDANGLLVTPDGY 119

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
              LD    P+ IP       V   G +S  G+ +  +GL   +      R   +   PN
Sbjct: 120 QL-LDAGGAPVFIPPDARSIAVAADGTLSADGRPLTNIGLVVPEDPLLMERAPGASFIPN 178

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
               P E+    +V +GF+E SN N + E+ +MI + +++ S  + ID+ +  +   I+ 
Sbjct: 179 GGVLPAEN---ASVHQGFIEGSNVNPIVEVARMIEVQRRYESAKSFIDKEDDRIKTVIQT 235

Query: 241 IA 242
           + 
Sbjct: 236 LG 237


>gi|170722889|ref|YP_001750577.1| flagellar basal body rod protein FlgG [Pseudomonas putida W619]
 gi|169760892|gb|ACA74208.1| flagellar basal-body rod protein FlgG [Pseudomonas putida W619]
          Length = 261

 Score =  164 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 47/261 (18%), Positives = 97/261 (37%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  +      A +  L+ +++N++N  T GF+  + +F +++  IK           
Sbjct: 1   MLPALWVAKTGLSAQDTNLTVISNNLANVSTTGFKRDRAEFQDLLYQIKRQPGAQSTQDS 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                 Q  + V       + + GS  +T   LD A+ G  +F +  P G +  TRDG F
Sbjct: 61  ELPSGLQVGTGVRIVGTQKNFQTGSLQTTENPLDMAVNGRGFFQVLQPDGTVSYTRDGTF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
            +  DG +V+A+G      +      Q     +   V      +   +VI  +       
Sbjct: 121 HLNSDGQIVTANGFALEPAVVVPNDAQTFTVGQDGTVSITTAGNPAAQVIGNIQTADFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++           +          T  +  LE+SN +++ E+  MI   + +
Sbjct: 181 PAGLQAIGDNLFLETAASGAPQVGTPGLNGFGTTLQQTLENSNVSTVEELVNMITTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
              + +I   ++ +    + +
Sbjct: 241 EMNSKVISTADQMLSFVTQQL 261


>gi|158422269|ref|YP_001523561.1| flagellar basal body rod protein FlgF [Azorhizobium caulinodans ORS
           571]
 gi|158329158|dbj|BAF86643.1| flagellar basal body rod protein [Azorhizobium caulinodans ORS 571]
          Length = 240

 Score =  164 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 75/242 (30%), Positives = 132/242 (54%), Gaps = 4/242 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + L+ Q+A E+R++T+A+N++N +T G+R  ++KFS ++        + I F +
Sbjct: 1   MSNGLYVALSGQMATEKRMATIANNVANMNTPGYRAEEIKFSSIMA---EQGAKDIKFAS 57

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           +G+ Y S+  G    T +  D A++G  WF++++P G+  TRDGRF VT DG LV +   
Sbjct: 58  TGESYTSRRAGPITYTNSPYDVAVQGKGWFSVKTPDGVAYTRDGRFNVTADGMLV-SVNN 116

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
           YPVLD     + I        +   G I Q    + T+GL+ + +     R +NS + P+
Sbjct: 117 YPVLDQGGTAVMIQPNQGELKITADGTIIQGTNPVGTLGLFEIPLDAKLKRYDNSAVIPD 176

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
              TP+ D +   +++G++E SN + + EM ++I + + F S    I + E S  ++IR 
Sbjct: 177 KAATPVTDYNSNAIRQGYVEGSNVDPVMEMTRLIMVQRAFESAAQAISQQETSGTDSIRA 236

Query: 241 IA 242
           + 
Sbjct: 237 LG 238


>gi|259908810|ref|YP_002649166.1| Flagellar basal-body rod protein [Erwinia pyrifoliae Ep1/96]
 gi|224964432|emb|CAX55941.1| Flagellar basal-body rod protein [Erwinia pyrifoliae Ep1/96]
 gi|283478792|emb|CAY74708.1| Flagellar basal-body rod protein flgG [Erwinia pyrifoliae DSM
           12163]
 gi|310767292|gb|ADP12242.1| Flagellar basal-body rod protein [Erwinia sp. Ejp617]
          Length = 260

 Score =  164 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 41/259 (15%), Positives = 88/259 (33%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I        +  +  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MIRSLWIAKTGLDGQQTNMDVIANNLANVSTNGFKRQRAVFEDLMYQTLRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  +             G+   T +  D A+ G  +F+++ P G    TRDG F
Sbjct: 61  TLPSGLQIGTGTRPVATERLHNQGNLSQTDSSKDVAINGQGFFSVQLPDGTAAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQI-PQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +   +G LV+++G      +      +         V    +       +  + L +   
Sbjct: 121 QTDQNGQLVTSAGFPVQPAIVIPANSLSMTISRDGVVSVTQQGQANPVQVGQLTLSTFMN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +            + +       T+ +G++E SN N   E+  MI   + +
Sbjct: 181 DAGLSSMGENLYQETQASGAPNESNPGNNGAGTLYQGYVETSNVNVAEELVSMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  I  +++ + +  +
Sbjct: 241 EINSKAISTSDQMLAKLTQ 259


>gi|255261552|ref|ZP_05340894.1| flagellar basal-body rod protein FlgG [Thalassiobium sp. R2A62]
 gi|255103887|gb|EET46561.1| flagellar basal-body rod protein FlgG [Thalassiobium sp. R2A62]
          Length = 261

 Score =  164 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 98/259 (37%), Gaps = 21/259 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             +  I      A + R+  +++N++N +T G+   + +F+++                 
Sbjct: 1   MRALQIAATGMAAQQMRVEVISNNLANMNTTGYNARRAEFADLHYQQIARPGTINAADGT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q    V      +    G+  +TG +LD A+EG+ +  +  P G    TRDG  
Sbjct: 61  VLPTGVQLGLGVRPTAVSMILSQGALSATGGDLDVAIEGEGYLEVTLPNGNAAYTRDGGL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           K T DG +V++ G   V D+      +    +    +        + +++    L     
Sbjct: 121 KRTGDGLIVTSDGFPVVPDITIPRDARSISINAEGEIYGYFTDRVEPELLGQFTLSGFTN 180

Query: 166 SQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
            +G     N+         P             +++G+LEDS+ + + E+  +I   + +
Sbjct: 181 PRGLEAIGNNLFLETSASGPSIVTEPGQDGLGVLRQGYLEDSSVDPVKEVTDLIEAQRGY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              + +I   ++ +   ++
Sbjct: 241 ELNSKVITAADQMLSSMVQ 259


>gi|296157454|ref|ZP_06840289.1| flagellar basal-body rod protein FlgG [Burkholderia sp. Ch1-1]
 gi|295892226|gb|EFG72009.1| flagellar basal-body rod protein FlgG [Burkholderia sp. Ch1-1]
          Length = 262

 Score =  164 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 90/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A + ++  +++N++N  T GF+  +  F +++               
Sbjct: 1   MNRSLYIAATGMNAQQAQMDVISNNLANVSTNGFKGSRAVFEDLLYQTIRQPGANSTQNT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+   TG   D A+ G  +F ++ P      TRDG F
Sbjct: 61  ELPSGIQLGTGVQQVATERLYTQGNLQQTGNSKDVAINGQGFFQVQMPDGTTAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           +    G LV++SG   +  +                V      S   + + +M + +   
Sbjct: 121 QTNAQGQLVTSSGYQVIPGITIPNNATSLTIGSDGVVSITVAGSTNSQQLGSMQVATFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   +  +  +                   T+ +G++E SN N + E+  MI   + +
Sbjct: 181 PAGLDAKGENLFAETASSGAPNVAQPGLNGAGTLNQGYVEASNVNVVQELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ +    +
Sbjct: 241 EINSKAVTTSDQMLQTLSQ 259


>gi|226313061|ref|YP_002772955.1| flagellar hook protein FlgE [Brevibacillus brevis NBRC 100599]
 gi|226096009|dbj|BAH44451.1| flagellar hook protein FlgE [Brevibacillus brevis NBRC 100599]
          Length = 272

 Score =  164 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 47/269 (17%), Positives = 95/269 (35%), Gaps = 30/269 (11%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++     + +L  + +N++N +TVGF+  +V F +++               
Sbjct: 1   MLRSMYSGISGLRGFQTKLDVIGNNIANVNTVGFKKGRVMFQDILSQNVQGAGAPTAGGK 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR--GIILTRDGR 105
                 Q     +          GS ++T    D ++EGD +F +       I  TR G 
Sbjct: 61  GGTNPTQIGLGASIASIDTVFSAGSPMTTNLPTDLSIEGDGFFMVSPDEGATIYYTRAGN 120

Query: 106 FKVTDDGSLVSASGKYPVLDMA------SVPIQIPQKDEIFNVGEKGEISQKGKVIATMG 159
           F    +G LV++ G   +               +        V    + +       T+G
Sbjct: 121 FTRDAEGYLVNSQGMKLMNTDPAAIQISQNDGVVSYSIGKDGVITTVDETGALDSTNTIG 180

Query: 160 LYSVDMSQGFVRRENSGISPNIPPTPLEDLSG---------VTVKRGFLEDSNANSMYEM 210
           + + +   G  +  N+     +     +             V++  G LE SN +   E 
Sbjct: 181 VMTFNNPGGLKKIGNNLYENTVNAGANDGDPMTPVTPADAKVSIIAGQLEMSNVDLSEEF 240

Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +MI   + F + + +I  ++  + E + 
Sbjct: 241 TEMIVAQRGFQANSRIITTSDTVLEELVN 269


>gi|149908757|ref|ZP_01897418.1| putative flagellar basal-body rod protein [Moritella sp. PE36]
 gi|149808299|gb|EDM68238.1| putative flagellar basal-body rod protein [Moritella sp. PE36]
          Length = 261

 Score =  164 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 52/261 (19%), Positives = 97/261 (37%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M ++         A + ++S +A+N++N +T GF+  +V FS++   IK           
Sbjct: 1   MSSALWTSKTGLAAQDVKMSIIANNLANVNTTGFKKDRVAFSDLFYDIKRQPGALADQNN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106
                 Q  + V           GSF  TG ELD A+ G  +F +E     I  TR+G+F
Sbjct: 61  EIPTGVQVGNGVRVTGTQKVFTPGSFADTGQELDMAIIGKGFFQVEQVSGEIAYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165
            +  D  +V++ G   V  +                           + +  + L S   
Sbjct: 121 TLNSDSQIVNSDGLPLVPSIQIPADATSITIGSDGTITAQLAGESAPQDVGQITLASFAN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G V    +  +        ++      S   +K+  LE SN + + EM  MI   + +
Sbjct: 181 PAGLVALGGNLYTETGSSGAAQEGVAGEASLGQIKQRGLEGSNVSVVEEMVDMISTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
                ++   +K +    +++
Sbjct: 241 EMNAKVVSAADKMLQFVTQSL 261


>gi|16126302|ref|NP_420866.1| flagellar basal-body rod protein FlgF [Caulobacter crescentus CB15]
 gi|221235079|ref|YP_002517515.1| flagellar basal-body rod protein FlgF [Caulobacter crescentus
           NA1000]
 gi|13637950|sp|Q06171|FLGF_CAUCR RecName: Full=Flagellar basal-body rod protein flgF
 gi|13423542|gb|AAK24034.1| flagellar basal-body rod protein FlgF [Caulobacter crescentus CB15]
 gi|220964251|gb|ACL95607.1| flagellar basal-body rod protein flgF [Caulobacter crescentus
           NA1000]
          Length = 245

 Score =  164 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 62/244 (25%), Positives = 111/244 (45%), Gaps = 4/244 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTI--KVKFSEVVGAIKNDIDQKISF 58
           M  +  +GL+ Q+ L + L  VA+N++N +T GF+     V+  +   A   D    + F
Sbjct: 1   MDNALYVGLSRQMTLRRELDIVANNIANANTTGFKVEDLMVRTEQAKPAKTLDGSSPVKF 60

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSAS 118
           V       +   G    TG + D A+ G  +F +++  G   TRDGRF    +G LV+ +
Sbjct: 61  VMDTGVARNFTQGPMTKTGGDYDLAINGMGFFKVQANGGERYTRDGRFTTNPEGILVTQA 120

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178
           G  PVLD     I I  +     VG+ G +SQ    +  +GL   D    F +  ++   
Sbjct: 121 G-APVLDDGGGQITIDPRLGPVTVGKDGIVSQGAIRVGRIGLVRPDDLSTFAKDGDNLYR 179

Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
                 P + ++   + +G LE SN   + E+ ++I + + + S+  ++D   +    A+
Sbjct: 180 NTTNTAP-QPVTDAQIHQGMLEASNVQPVIEITKLIEIQRAYESVAKMMDNTAELSRSAV 238

Query: 239 RNIA 242
             + 
Sbjct: 239 ERLG 242


>gi|212637787|ref|YP_002314312.1| flagellar basal body rod protein [Shewanella piezotolerans WP3]
 gi|212559271|gb|ACJ31725.1| Flagellar basal body rod protein [Shewanella piezotolerans WP3]
          Length = 261

 Score =  164 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 44/261 (16%), Positives = 103/261 (39%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           MQ++  +      A + +++T+A+N++N +T GF+  +V F+++   ++           
Sbjct: 1   MQSALWVSKTGLTAQDTKMTTIANNLANVNTTGFKRDRVAFNDLFYQVQRQPGGQVDEQN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106
                 Q  +             G  ++T  +LD A+EG  +F +E     +  +RDG+F
Sbjct: 61  ELPSGLQLGTGTRVVGTQKVFTSGDMLTTNQQLDLAIEGQGFFQIEESNGDLSFSRDGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
               +G +V++ G   V ++      +         V  +       + +  + L +   
Sbjct: 121 YRNSEGLMVTSQGLPLVPNIEIPEEALTITIATDGIVSAQMAGQADAQELGQITLVNFTN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   R N+            +      +   +++G LE +N N + EM +MI   + +
Sbjct: 181 PAGLEARGNNLYRETGASGAAIEGVAGDQALGQIRQGALEGANVNVVEEMVEMISTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
                ++  ++  +    + +
Sbjct: 241 EMNAKVVSASDDMLKFLNQAL 261


>gi|271500068|ref|YP_003333093.1| flagellar basal-body rod protein FlgG [Dickeya dadantii Ech586]
 gi|270343623|gb|ACZ76388.1| flagellar basal-body rod protein FlgG [Dickeya dadantii Ech586]
          Length = 260

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 83/259 (32%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A +  +  +++N++N  T GF+  +  F +++               
Sbjct: 1   MIRSLWIAKTGLNAQQTNMDVISNNLANVSTNGFKRQRAVFEDLMYQTVRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                 Q  + V           G    TG   D A+ G  +F +  P G    TRDG F
Sbjct: 61  TLPSGLQLGTGVRPVSTERIHTQGGLTETGNAKDLAINGAGFFQVLMPDGTTQYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           ++  +G LV++SG      +                V    +       +  + L     
Sbjct: 121 QLDSNGQLVTSSGFQVQPAITIPANATNITVGRDGVVTVTQQGQTAPVQVGQLNLAMFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +  +           +        + + ++E SN N   E+  MI   + +
Sbjct: 181 EAGLQNMGENLYAETASSGAPTQSTPGLNGAGLIMQKYVETSNVNVAEELVSMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  I   ++ + +  +
Sbjct: 241 EINSKAISSTDQMLQKLTQ 259


>gi|115523179|ref|YP_780090.1| flagellar basal body rod protein FlgG [Rhodopseudomonas palustris
           BisA53]
 gi|115517126|gb|ABJ05110.1| flagellar basal-body rod protein FlgG [Rhodopseudomonas palustris
           BisA53]
          Length = 262

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 42/262 (16%), Positives = 89/262 (33%), Gaps = 21/262 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----------- 50
             S  I      A +  +  +A+N++N +T  ++  + +F+++   I             
Sbjct: 1   MRSLAIAATGMSAQQLNVEVIANNIANINTTSYKRSRAEFTDLFYQIDRMQGVPNRVGEG 60

Query: 51  ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
              +  +    V S         G+   TG   D A+ G  WF +  P    + TR G F
Sbjct: 61  AVPEGAKLGLGVRSAAVRKLHLQGALAQTGNAYDLAVNGRGWFQVVGPNGDTLYTRAGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQK-DEIFNVGEKGEISQKGKVIATMGLYSVDM 165
               D  LV+A G      +           +E   V  K +     +++  + L +   
Sbjct: 121 NTNADAQLVTADGYKVDPTILIPEGTAQVTVNESGQVYAKLDTEVTPRLLGQLTLANFAN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++     I                 + + +LE SN + + E+ ++I   + +
Sbjct: 181 EAGLDPLGSNLYKETIASGTPVVGFPGDIGFGKIHQHYLESSNVDPVKEITELISAQRSY 240

Query: 221 NSITTLIDENEKSMLEAIRNIA 242
              + +I   ++      + + 
Sbjct: 241 EMNSKVIQAADEMASTISKGLR 262


>gi|186477699|ref|YP_001859169.1| flagellar basal body rod protein FlgG [Burkholderia phymatum
           STM815]
 gi|184194158|gb|ACC72123.1| flagellar basal-body rod protein FlgG [Burkholderia phymatum
           STM815]
          Length = 262

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 91/259 (35%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A + ++ T+++N++N  T GF+  +  F +++               
Sbjct: 1   MNRSLYIAATGMNAQQAQMDTISNNLANVSTNGFKGSRAVFEDLLYQTIRQPGANSTQQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+   TG   D A+ G  +F ++ P      TRDG F
Sbjct: 61  ELPSGIQLGTGVQQVATERLYTQGNLQQTGNSKDVAINGQGFFQVQMPDGTTAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           +    G LV++SG   +  +                V      S     I ++ + +   
Sbjct: 121 QTNSQGQLVTSSGYQVLPAITIPQNATSLTIGSDGVVSVTTAGSTATTQIGSLQIATFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   +  +  +           +       T+ +G++E SN N + E+  MI   + +
Sbjct: 181 PTGLDAKGENLFAETTSSGTPNVATPGLNGAGTLNQGYVEASNVNVVQELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ +    +
Sbjct: 241 EINSKAVTTSDQMLQTLSQ 259


>gi|332088746|gb|EGI93858.1| flagellar basal-body rod protein FlgG [Shigella boydii 5216-82]
          Length = 260

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 89/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M +S  I      A +  +  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V S         G+   T    D A++G  +F +  P      TRDG F
Sbjct: 61  TLPSGLQIGTGVRSVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGSSAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V  +G LV+A G      +      +         V    +       +  + L +   
Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +  +         + +        + +G+++ SN N   E+  MI + + +
Sbjct: 181 DTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVDTSNVNVAEELVNMIQVQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +   ++ + +  +
Sbjct: 241 EINSKAVSTTDQMLQKLTQ 259


>gi|319898631|ref|YP_004158724.1| flagellar basal-body rod protein flgF [Bartonella clarridgeiae 73]
 gi|319402595|emb|CBI76140.1| Flagellar basal-body rod protein flgF [Bartonella clarridgeiae 73]
          Length = 244

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 75/241 (31%), Positives = 135/241 (56%), Gaps = 1/241 (0%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           MQ    +G++ Q+ LE+R+ T+A NM+N +T GFR   +KF  ++  + ++   ++ F +
Sbjct: 1   MQNPIYVGVSGQIGLERRMETIAQNMANVNTPGFRAGGMKFDTLISPVAHEQGDRVFFTS 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           +GK Y+S + GS + TG  LD A+ GD++F++++  G + TRDGR  +T +G LVS +G 
Sbjct: 61  AGKGYISTDRGSLVQTGNALDIAVTGDSYFSMQASFGQVYTRDGRMIMTPEGGLVSVTG- 119

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
            P LD    PIQ+     I  +   G I Q   ++  +GL+            NS + P+
Sbjct: 120 LPFLDEGGAPIQLDPVGGIPRIVSDGSIYQDNSLVGKIGLFQFQPGTQLRYGPNSSVIPD 179

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
                 E  SG  V +G++E SN N + EM ++I +++ F  + +++ + E+   ++I+ 
Sbjct: 180 RAVLQSEAGSGDGVMQGYIESSNVNGVIEMTRLIEVSRAFERVESMLRQQEEMRSKSIQV 239

Query: 241 I 241
           +
Sbjct: 240 L 240


>gi|254255089|ref|ZP_04948406.1| Flagellar basal body rod protein [Burkholderia dolosa AUO158]
 gi|124899734|gb|EAY71577.1| Flagellar basal body rod protein [Burkholderia dolosa AUO158]
          Length = 261

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 51/258 (19%), Positives = 93/258 (36%), Gaps = 19/258 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  I      A + +L T+A+N++N +TVGF+  +  F ++    +           
Sbjct: 1   MNHALWISKTGIQAQDAKLQTIANNLANVNTVGFKRDRAVFEDLFYRTEQQPGAQIADNA 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFK 107
                Q  +         +   G+  +TG  LD A+ GD +  +E   G    TR G+ +
Sbjct: 61  TGPGVQMGNGTRLVGTQKTFTAGNLQTTGQPLDVAIVGDGFLQVEMANGETGYTRAGQLR 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDMS 166
             D+G L +A G   V  +            E   V      S     +  + L +    
Sbjct: 121 RNDEGRLTNAQGLPLVPTIDIPADATSVTIGENGTVSVTTGSSAVPTEVGRLQLANFVNP 180

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFN 221
            G +    +         P  +          V++G LE SN  ++ EM +MI   + + 
Sbjct: 181 AGLLAVGGNLFVETGASGPPSEGEPGADGLGVVRQGALEGSNVQAVEEMVEMITAQRTYE 240

Query: 222 SITTLIDENEKSMLEAIR 239
             T ++   +  M    +
Sbjct: 241 MSTKVLSAADSMMQYLAQ 258


>gi|308068661|ref|YP_003870266.1| flagellar basal-body rod protein flgG (Distal rod protein)
           [Paenibacillus polymyxa E681]
 gi|305857940|gb|ADM69728.1| Flagellar basal-body rod protein flgG (Distal rod protein)
           [Paenibacillus polymyxa E681]
          Length = 272

 Score =  163 bits (413), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 52/269 (19%), Positives = 100/269 (37%), Gaps = 30/269 (11%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++     + +L  + +N++N +T GF++ +V F +++    +          
Sbjct: 1   MLRSMYSGVSGMKGFQTKLDVIGNNIANVNTTGFKSSRVMFKDILSQTSSGASAPGDAAG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI---ILTRDGR 105
                Q       G        GS ++T    D  + GD +F ++         LTR G 
Sbjct: 61  GINAKQVGLGSTVGSIDTLHLPGSAMTTNNPTDLRINGDGFFLVKMTGDQEVPYLTRAGD 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQK-----GKVIATMGL 160
           F V  +  LV++ G +        PIQ+      F++ + G I Q+           +G+
Sbjct: 121 FHVDGNRQLVTSDGLFVADSGGGTPIQLNDLTTSFSISQDGTIVQQLSDGTVDNQTKVGV 180

Query: 161 YSVDMSQGFVRRENSGISPNIPPTPL----------EDLSGVTVKRGFLEDSNANSMYEM 210
             V   +G  +   S     +                D     +  G LE SN +   E 
Sbjct: 181 TKVINPEGLEKIGGSLYRATVNSGEEGAVNPMEANSTDAGTGAIVAGQLEMSNVDLTGEF 240

Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +MI   + F + + +I  +++ + E + 
Sbjct: 241 TEMIVAQRGFQANSRIITTSDEVLQEVVN 269


>gi|134300225|ref|YP_001113721.1| hypothetical protein Dred_2386 [Desulfotomaculum reducens MI-1]
 gi|134052925|gb|ABO50896.1| protein of unknown function DUF1078 domain protein
           [Desulfotomaculum reducens MI-1]
          Length = 266

 Score =  163 bits (413), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 53/264 (20%), Positives = 98/264 (37%), Gaps = 24/264 (9%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKF---------SEVVGAIKNDI 52
             + + G +   A + +L T+ +N++N +T  F+  +  F          + + A  +  
Sbjct: 3   IKTLSSGASGMRAHQLKLDTIGNNIANINTTAFKKNRTDFGEIVRQAIGEDGIPAANDPR 62

Query: 53  DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG----IILTRDGRF-- 106
            +  S V         + G  I TG +LD A+EG  +F +    G       TRDG F  
Sbjct: 63  PEGGSGVRIVSLARVIDQGDLIQTGRDLDLAIEGQGFFKVTPATGDDDIEYYTRDGSFYI 122

Query: 107 -KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV--IATMGLYSV 163
             + D+  LV++SG   V D                    G+  + GK   +  + L++ 
Sbjct: 123 TTIDDETVLVNSSGYKLVWDGELDAETYKAYSVDEKGTVWGQRIEDGKTEEVGNIELFTF 182

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
               G V + ++                      ++  G+LE SN +   EM  MI   +
Sbjct: 183 PAPSGLVSKGSNLYMATEASGEETSGVPGEDGIGSIYSGYLERSNVDLATEMIGMIEAQR 242

Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242
            + + +  I   ++    A  N+ 
Sbjct: 243 AYAANSRTIQTADEMWDRA-NNLR 265


>gi|292489131|ref|YP_003532018.1| flagellar basal-body rod protein FlgG [Erwinia amylovora CFBP1430]
 gi|292900250|ref|YP_003539619.1| flagellar basal-body rod protein [Erwinia amylovora ATCC 49946]
 gi|291200098|emb|CBJ47224.1| flagellar basal-body rod protein [Erwinia amylovora ATCC 49946]
 gi|291554565|emb|CBA22177.1| Flagellar basal-body rod protein flgG [Erwinia amylovora CFBP1430]
 gi|312173289|emb|CBX81544.1| Flagellar basal-body rod protein flgG [Erwinia amylovora ATCC
           BAA-2158]
          Length = 260

 Score =  163 bits (413), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 90/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A +  +  +++N++N  + GF+  +  F +++               
Sbjct: 1   MIRSLWIAKTGLEAQQTNMDVISNNLANVGSTGFKRQRAVFQDLLYQTMRQPGAQASEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + VA+         GS   TG + D A++G  +F ++ P      TRDG F
Sbjct: 61  TLPTGMQLGTGVATVATQRMHTQGSLTQTGRDYDMAIQGKGFFQVQLPDGTTAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
            + ++G +V+A G     D+            E   V          + I  + L +   
Sbjct: 121 SLNENGQMVTAEGNPVQPDITVPADAQKLTVGEDGIVTATVPGQAAPQQIGQLTLANFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +  +                    +K  ++E SN N   E+  MI + + +
Sbjct: 181 DAGLESLGGNLYAETQASGAPNEATPGMDGAGRLKHQYIETSNVNVAEELVTMIQVQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ +    +
Sbjct: 241 EINSKAVSASDQMLQRLAQ 259


>gi|262276415|ref|ZP_06054224.1| flagellar basal-body rod protein FlgG [Grimontia hollisae CIP
           101886]
 gi|262220223|gb|EEY71539.1| flagellar basal-body rod protein FlgG [Grimontia hollisae CIP
           101886]
          Length = 262

 Score =  163 bits (413), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 46/262 (17%), Positives = 95/262 (36%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +  +      A +  +ST+++N++N  TVGF+  +  F ++     N    +     
Sbjct: 1   MHPALWVSKTGLDAQQTNISTISNNLANASTVGFKKSRAVFEDLFYQNINQPGGQSSQNT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    +             G+  +T   LD  +EGD +F +  P   I   R+G+F
Sbjct: 61  ELPSGLMLGAGSKVVATQRVHTNGNVQTTNNALDLMIEGDGFFQILLPDGNIGYQRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG--EISQKGKVIATMGLYSVD 164
            + D+G +V++   YP+     VP    Q     +          Q+  ++  +      
Sbjct: 121 TLNDEGVIVTSGAGYPLEPEIVVPPDAIQVTVGTDGEVSARLRGQQENAILGQITTVDFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +   P       ++         +V++  LE SN N   E+  MI   + 
Sbjct: 181 NPGGLEPIGQNLYLPTGASGDPQEGVPGLDGLGSVRQSMLETSNVNVTEELVNMIEAQRV 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   ++ +    + +
Sbjct: 241 YEMNSKVISSVDQMLSYVNQQL 262


>gi|323527711|ref|YP_004229864.1| flagellar basal-body rod protein FlgG [Burkholderia sp. CCGE1001]
 gi|323384713|gb|ADX56804.1| flagellar basal-body rod protein FlgG [Burkholderia sp. CCGE1001]
          Length = 262

 Score =  163 bits (413), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 89/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A + ++  +++N++N  T GF+  +  F +++               
Sbjct: 1   MNRSLYIAATGMNAQQAQMDVISNNLANVSTNGFKGSRAVFEDLLYQTVRQPGANSTQQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+   TG   D A+ G  +F ++ P      TRDG F
Sbjct: 61  ELPSGIQLGTGVQQVATERLYTQGNLQQTGNSKDVAINGQGFFQVQMPDGTTAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQKGKVIATMGLYSVDM 165
           +    G LV++SG   +  +                       S   + + TM L +   
Sbjct: 121 QTNAQGQLVTSSGYQVIPAITVPTNATSLTIGSDGAVSITVAGSTNTQQLGTMQLATFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   +  +  +                   T+ +G++E SN N + E+  MI   + +
Sbjct: 181 PAGLDAKGENLFAETASSGAPNVAQPGLNGAGTLNQGYVEASNVNVVQELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ +    +
Sbjct: 241 EINSKAVTTSDQMLQTLSQ 259


>gi|94312671|ref|YP_585880.1| flagellar basal body distal rod protein [Cupriavidus metallidurans
           CH34]
 gi|93356523|gb|ABF10611.1| flagellar basal body distal rod protein [Cupriavidus metallidurans
           CH34]
          Length = 261

 Score =  163 bits (413), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 87/259 (33%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A + ++  +++N++N  T GF+  +  F E++               
Sbjct: 1   MIRSLWIAKTGLDAQQTQMDVISNNLANVSTTGFKRSRAVFEEMMYQTIRQPGAMSSDQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                 Q  + V           G+   TG   D A+ G+ +F +  P G    TRDG F
Sbjct: 61  VLPSGMQIGTGVRPVATERIHTQGNPQQTGNAKDVAIIGNGFFQVTMPDGTTSYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIP-QKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V  +G LV++SG      +                V      S     +  + L +   
Sbjct: 121 QVDQNGQLVTSSGFVINPAITLPANYTSVNIARDGTVTVMQPGSTNAATVGQLQLATFPN 180

Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +                      T++  ++E SN N + E+  MI   + +
Sbjct: 181 PTGLESMGENLYVQTDASGAPNTTVPGLNGAGTLQNNYVEASNVNVVEELVSMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ +    +
Sbjct: 241 EINSKAVQTSDQMLQRLTQ 259


>gi|152997580|ref|YP_001342415.1| flagellar basal-body rod protein FlgG [Marinomonas sp. MWYL1]
 gi|150838504|gb|ABR72480.1| flagellar basal-body rod protein FlgG [Marinomonas sp. MWYL1]
          Length = 261

 Score =  163 bits (413), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 49/261 (18%), Positives = 96/261 (36%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M ++  +      A++++L+ VA+N++N  T  F+  +  F +++               
Sbjct: 1   MNSALWVSKTGLSAMDKQLNVVANNLANVSTTAFKKDRAVFEDLMYKTVRAPGGLSAQNA 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V  G        G +  T  +LD A++G  +  +  P   I  TR+G  
Sbjct: 61  ELPSGLQLGTGVKVGATQKDFSNGDYNMTDRQLDIAIQGKGFLQVLQPDGTIAYTRNGSL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           ++   G L ++ G      +   P  I     E   V  +       + +  + +     
Sbjct: 121 QLNSQGQLATSGGLVLEPGIQIDPDVIEIMIAEDGIVSVRKNGDADAQQVGAINIAGFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +  +      P         S  T+ +G LE SN NS+ E+  MI   + +
Sbjct: 181 PTGLSSAGQNLFTETNASGPPLVGVPGTDSLGTIAQGMLEASNVNSIEELVNMITTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
              + +I   +  M  AI+ +
Sbjct: 241 EMNSKVIASADGMMSFAIQQL 261


>gi|307731361|ref|YP_003908585.1| flagellar basal-body rod protein FlgG [Burkholderia sp. CCGE1003]
 gi|307585896|gb|ADN59294.1| flagellar basal-body rod protein FlgG [Burkholderia sp. CCGE1003]
          Length = 262

 Score =  163 bits (413), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 89/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A + ++  +++N++N  T GF+  +  F +++               
Sbjct: 1   MNRSLYIAATGMNAQQAQMDVISNNLANVSTNGFKGSRAVFEDLLYQTVRQPGANSTQNT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+   TG   D A+ G  +F ++ P      TRDG F
Sbjct: 61  ELPSGIQLGTGVQQVATERLYTQGNLQQTGNSKDVAINGQGFFQVQMPDGTTAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQKGKVIATMGLYSVDM 165
           +    G LV++SG   +  +                       S   + + TM L +   
Sbjct: 121 QTNAQGQLVTSSGYQVIPAITVPSNATSLTIGSDGAVSISVAGSTNTQQLGTMQLATFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   +  +  +                   T+ +G++E SN N + E+  MI   + +
Sbjct: 181 PAGLDAKGENLFAETASSGAPNVAQPGLNGAGTLNQGYVEASNVNVVQELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ +    +
Sbjct: 241 EINSKAVTTSDQMLQTLSQ 259


>gi|313894975|ref|ZP_07828534.1| flagellar basal-body rod protein FlgG [Selenomonas sp. oral taxon
           137 str. F0430]
 gi|320530443|ref|ZP_08031501.1| flagellar basal-body rod protein FlgG [Selenomonas artemidis F0399]
 gi|312976428|gb|EFR41884.1| flagellar basal-body rod protein FlgG [Selenomonas sp. oral taxon
           137 str. F0430]
 gi|320137276|gb|EFW29200.1| flagellar basal-body rod protein FlgG [Selenomonas artemidis F0399]
          Length = 264

 Score =  163 bits (413), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 41/263 (15%), Positives = 88/263 (33%), Gaps = 23/263 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +     +   A +  +  VA N++N +T G + ++ +F ++V     +         
Sbjct: 1   MMRALWSAASGMKAQQAHMDIVAHNIANVNTHGGKKVRAEFQDLVYQTLREAGARNGTDS 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q                G+  +T    D  ++G+ +F +  P      TRDG +
Sbjct: 61  QYPTALQIGLGTRVAATQRIFTQGALQTTDNPTDIGIQGEGFFRVTLPDGSTAYTRDGTW 120

Query: 107 KVTDDGSLVSASGK---YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
           K+  +  +V+  G      +    + P +         V  +     + +    + L   
Sbjct: 121 KLDSNRRMVTTDGYLIADGIQIGENAPSESITISGDGRVSYREAGQTQQQEAGQITLARF 180

Query: 164 DMSQGFVRRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
               G      +    +        +        T+ +G LE SN   + EM +MI   +
Sbjct: 181 VNPAGLTSIGKNLFVVSDASGEAIESTPGLDGTGTLTQGTLEMSNVQIVEEMVEMIISQR 240

Query: 219 KFNSITTLIDENEKSMLEAIRNI 241
            + S +  I  ++  + E    +
Sbjct: 241 AYESNSKAITTSDSML-EIANTL 262


>gi|170694394|ref|ZP_02885548.1| flagellar basal-body rod protein FlgG [Burkholderia graminis C4D1M]
 gi|170140817|gb|EDT08991.1| flagellar basal-body rod protein FlgG [Burkholderia graminis C4D1M]
          Length = 262

 Score =  163 bits (413), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 90/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A + ++  +++N++N  T GF+  +  F +++               
Sbjct: 1   MNRSLYIAATGMNAQQSQMDVISNNLANVSTNGFKGSRAVFEDLLYQTVRQPGANSTQNT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+   TG   D A+ G  +F ++ P      TRDG F
Sbjct: 61  ELPSGIQLGTGVQQVATERLYTQGNLQQTGNSKDVAINGQGFFQVQMPDGTTAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           +    G LV++SG   +  +                V      S   + + +M + +   
Sbjct: 121 QTNAQGQLVTSSGYQVIPAITVPTNATSLTIGSDGVVSITVAGSTNSQQLGSMQIATFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   +  +  +                   T+ +G++E SN N + E+  MI   + +
Sbjct: 181 PAGLDAKGENLFAETASSGAPNVAQPGLNGAGTLNQGYVEASNVNVVQELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ +    +
Sbjct: 241 EINSKAVTTSDQMLQTLSQ 259


>gi|220930463|ref|YP_002507372.1| hypothetical protein Ccel_3100 [Clostridium cellulolyticum H10]
 gi|220000791|gb|ACL77392.1| protein of unknown function DUF1078 domain protein [Clostridium
           cellulolyticum H10]
          Length = 270

 Score =  163 bits (413), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 50/270 (18%), Positives = 101/270 (37%), Gaps = 29/270 (10%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +     +   A +  +  +++N++N +T G++  + +F +++    +          
Sbjct: 1   MMRALYTAGSGMKAQQFNVDVISNNLANVNTTGYKKERAEFKDLLYQTMDRAYVLNDAGK 60

Query: 54  ----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFK- 107
               Q            + E G+   T + LDFA++G+ +F +  P+G +  TRDG FK 
Sbjct: 61  PVNLQVGHGTVVSSTVRNFENGTPEQTSSNLDFAIDGEGFFTIMGPQGTVQYTRDGSFKL 120

Query: 108 ----------VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157
                      T DG  V  +    +L    V I          +  K        +  T
Sbjct: 121 SITEDGMKKLTTADGYAVLDNSGEEILFDPEVNISELSVSPRGEMSYKDAEGVSVPMDQT 180

Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQ 212
           +G+             N+  S N           ++ +   +K+GFLE SN   + EM +
Sbjct: 181 IGMVIFPNKYALEAVGNNLYSSNSATGEPVQVSEDENAKSIMKQGFLESSNVQVVDEMVK 240

Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           +I   + +   +  I  ++  + +   N+ 
Sbjct: 241 LIVAQRAYEVSSKAIQSSDDML-QIANNLR 269


>gi|209521591|ref|ZP_03270289.1| flagellar basal-body rod protein FlgG [Burkholderia sp. H160]
 gi|209497974|gb|EDZ98131.1| flagellar basal-body rod protein FlgG [Burkholderia sp. H160]
          Length = 262

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 91/259 (35%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A + ++  +++N++N  T GF+  +  F +++               
Sbjct: 1   MNRSLYIAATGMNAQQAQMDVISNNLANVSTNGFKGSRAVFEDLLYQTIRQPGANSTQQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+   TG   D A+ G  +F ++ P      TRDG F
Sbjct: 61  ELPSGIQLGTGVQQVATERLYTQGNLQQTGNSKDVAINGAGFFQVQMPDGTTAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           +    G LV++SG   +  +               +V      S   + + TM L +   
Sbjct: 121 QTNAQGQLVTSSGYQVIPAITIPTNATSLTIGSDGSVSITVAGSSNTQQLGTMQLATFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   +  +  +                   T+ +G++E SN N + E+  MI   + +
Sbjct: 181 PAGLDAKGENLFAETASSGAPNVSQPGLNGAGTLNQGYVEASNVNVVQELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ +    +
Sbjct: 241 EINSKAVTTSDQMLQTLSQ 259


>gi|254503570|ref|ZP_05115721.1| conserved domain protein [Labrenzia alexandrii DFL-11]
 gi|222439641|gb|EEE46320.1| conserved domain protein [Labrenzia alexandrii DFL-11]
          Length = 243

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 76/243 (31%), Positives = 130/243 (53%), Gaps = 4/243 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           MQ++  + L+AQ+AL  RL TV+ N++N +T G+R  ++ F+E+V         K+SF +
Sbjct: 1   MQSALYVALSAQVALSNRLETVSRNVANMNTAGYRADEINFAEMVSKAG---PDKVSFSS 57

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119
            G+ Y+S++ GS   T   LD A+EG+AWFA+     G+  TRDGR  ++DDG+L + +G
Sbjct: 58  GGENYISRQNGSLNKTDNPLDLAIEGEAWFAIRDANGGLSYTRDGRLHISDDGTLKTVTG 117

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
           +  V          P             I     ++  +GL+ +       R+ENS + P
Sbjct: 118 QVVVGAGGQPIQLNPDGGTPLITQNGDIIQGDEDIVGQIGLFLIPNDAKLTRKENSAVVP 177

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +    P++      +++G++E +N N + EM +MI +++ F S T +ID   +S   AIR
Sbjct: 178 DRAVIPVQVFDQHGIRQGYVEGANINPVREMTKMIMISRAFESATKMIDMGSESQKTAIR 237

Query: 240 NIA 242
            + 
Sbjct: 238 ELG 240


>gi|302383956|ref|YP_003819779.1| flagellar basal-body rod protein FlgG [Brevundimonas subvibrioides
           ATCC 15264]
 gi|302194584|gb|ADL02156.1| flagellar basal-body rod protein FlgG [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 262

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 98/254 (38%), Gaps = 21/254 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             +     +   A +  +  +++N++N +TVG++  + +F +++      +         
Sbjct: 1   MRALRTAASGMAAQQLNVEVISNNIANMNTVGYKRQRAEFQDLIYQNVERMGAQSSSQGT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                 Q    V +G  Y   E G+   TG++ D A++G  +F +  P G I  TR G F
Sbjct: 61  VVPTGIQVGLGVKAGSVYRITEQGTPTQTGSDYDVAIDGQGYFQITMPSGEIGYTRAGNF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
            ++ +G LV+  G      ++     I         V      S +  ++  + L +   
Sbjct: 121 SLSGEGQLVTEDGYAVEPAISIPQDAIDVTISKTGQVQVITAGSPEPAIVGQLELATFFN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++ +       P             + +G+ E SN +++ E+  +I   + +
Sbjct: 181 EAGLEAIGDNLLLETAASGPATTGTPGETGFGQLLQGYTEASNVDAVTEISALIIAQRAY 240

Query: 221 NSITTLIDENEKSM 234
              + +I   ++ M
Sbjct: 241 EMNSKVITTADEMM 254


>gi|153001470|ref|YP_001367151.1| flagellar basal body rod protein FlgG [Shewanella baltica OS185]
 gi|151366088|gb|ABS09088.1| flagellar basal-body rod protein FlgG [Shewanella baltica OS185]
          Length = 262

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 41/262 (15%), Positives = 93/262 (35%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  I      A +  ++ +++N++N  TVG++  +  F +++    N          
Sbjct: 1   MHPALWISKTGLDAQQTDIAVISNNVANASTVGYKKSRAVFEDLLYQTVNQAGGVSSSNT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                    +             G+ ++T   LD  +EG  +F ++ P G    TR+G+F
Sbjct: 61  KLPNGLNIGAGTKVVATQKMFTQGNMLTTDNSLDLMIEGPGFFEIQLPDGTAAYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE--KGEISQKGKVIATMGLYSVD 164
            + D G +V+    Y +    ++P                K   +   +V+  + +    
Sbjct: 121 TLDDTGQIVTPGSGYVLQPAITIPDNATSITVSAEGEISVKTPGTADNQVVGQLTMTDFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +  +                    +++G LE SN N   E+  +I   + 
Sbjct: 181 NPSGLDPMGQNLYTETGASGTPIQGTASLDGMGAIRQGALETSNVNVTEELVNLIESQRI 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   ++ +    +N+
Sbjct: 241 YEMNSKVISAVDQMLSYVTQNL 262


>gi|126175144|ref|YP_001051293.1| flagellar basal body rod protein FlgG [Shewanella baltica OS155]
 gi|217972600|ref|YP_002357351.1| flagellar basal body rod protein FlgG [Shewanella baltica OS223]
 gi|304409976|ref|ZP_07391595.1| flagellar basal-body rod protein FlgG [Shewanella baltica OS183]
 gi|307302311|ref|ZP_07582069.1| flagellar basal-body rod protein FlgG [Shewanella baltica BA175]
 gi|125998349|gb|ABN62424.1| flagellar basal-body rod protein FlgG [Shewanella baltica OS155]
 gi|217497735|gb|ACK45928.1| flagellar basal-body rod protein FlgG [Shewanella baltica OS223]
 gi|304351385|gb|EFM15784.1| flagellar basal-body rod protein FlgG [Shewanella baltica OS183]
 gi|306914349|gb|EFN44770.1| flagellar basal-body rod protein FlgG [Shewanella baltica BA175]
          Length = 262

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 41/262 (15%), Positives = 93/262 (35%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  I      A +  ++ +++N++N  TVG++  +  F +++    N          
Sbjct: 1   MHPALWISKTGLDAQQTDIAVISNNVANASTVGYKKSRAVFEDLLYQTVNQAGGVSSSNT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                    +             G+ ++T   LD  +EG  +F ++ P G    TR+G+F
Sbjct: 61  KLPNGLNIGAGTKVVATQKMFTQGNMLTTDNSLDLMIEGPGFFEIQLPDGTAAYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE--KGEISQKGKVIATMGLYSVD 164
            + D G +V+    Y +    ++P                K   +   +V+  + +    
Sbjct: 121 TLDDTGQIVTPGSGYVLQPAITIPDNATSITVSAEGEVSVKTPGTADNQVVGQLTMTDFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +  +                    +++G LE SN N   E+  +I   + 
Sbjct: 181 NPSGLDPMGQNLYTETGASGTPIQGTASLDGMGAIRQGALETSNVNVTEELVNLIESQRI 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   ++ +    +N+
Sbjct: 241 YEMNSKVISAVDQMLSYVTQNL 262


>gi|295706277|ref|YP_003599352.1| flagellar hook protein FlgE [Bacillus megaterium DSM 319]
 gi|294803936|gb|ADF41002.1| flagellar hook protein FlgE [Bacillus megaterium DSM 319]
          Length = 263

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 49/261 (18%), Positives = 96/261 (36%), Gaps = 23/261 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++     + +L  + +N++N +T G++  +  F ++V               
Sbjct: 1   MLRSMYSGISGMKNFQTKLDVLGNNIANVNTYGYKKGRTTFQDLVSQQVAGATAPGANRG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                Q       G     +  GS  STG  LD A+ GD +F +        TR G F +
Sbjct: 61  GVNAKQVGLGSQIGTIDTVQTAGSIQSTGRPLDLAISGDGYFVVRDGVTNYYTRAGNFYL 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS-----V 163
              G+LV+  G Y         I IP   + +++G  G+++            +      
Sbjct: 121 DSSGNLVTGDGLYVQKTG-GGNINIPSTSKSYSIGADGKVNIIDANGNISSNQTVELAKF 179

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQ 218
             ++G  +   +  + ++        +       +     LE SN +   E   MI   +
Sbjct: 180 ANNEGLQKAGGNLFAQSVNSGGPLVGAPGANGTGSFVSSALEMSNVDLSEEFTDMIVAQR 239

Query: 219 KFNSITTLIDENEKSMLEAIR 239
            F + T +I  +++ + E + 
Sbjct: 240 GFQANTRIITTSDEILQELVN 260


>gi|297570292|ref|YP_003691636.1| flagellar basal-body rod protein FlgF [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296926207|gb|ADH87017.1| flagellar basal-body rod protein FlgF [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 244

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 57/236 (24%), Positives = 102/236 (43%), Gaps = 8/236 (3%)

Query: 8   GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLS 67
           G+   LA E+RL  VA+N++N DT G++   V F E++     +  +    +        
Sbjct: 12  GVETMLAQERRLDQVANNLANVDTAGYKKDAVSFWEMLYQANAERQRVGKALRVHT---D 68

Query: 68  KEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMA 127
            + G    TG  LD A++G+ +F +++ +GI  TR G F++   G L +  G   + D  
Sbjct: 69  HQQGHVDPTGNPLDLAIQGEGFFRIQTDQGIRYTRAGSFQLDPMGQLRTPEGGLVLGDG- 127

Query: 128 SVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE 187
                I      F V   G +   G  +  + +  V+     ++   +          + 
Sbjct: 128 ---GPIVVDGNNFAVERDGRVMVDGVQVNQLEVVGVNDLTNLIKEGRNLFRLAAEGEEMP 184

Query: 188 DLSGV-TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
             +    V++GFLE SN NS+ EM  MI L + + +   +I   +    +AI  + 
Sbjct: 185 LEAMNFQVRQGFLEKSNVNSVEEMTTMIDLQRSYEAQQKMIQAIDDMDEQAISRVG 240


>gi|91792666|ref|YP_562317.1| flagellar basal body rod protein FlgG [Shewanella denitrificans
           OS217]
 gi|91714668|gb|ABE54594.1| Flagellar basal-body rod FlgG [Shewanella denitrificans OS217]
          Length = 262

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 43/262 (16%), Positives = 95/262 (36%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  I      A +  +S +++N++N  T+G++  +  F +++    N          
Sbjct: 1   MHPALWISKTGLDAQQTDISVISNNVANASTIGYKKSRAVFEDLLYQTVNQAGGISADNT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                    +             G+ ++T   LD  +EG  +F ++ P G    TR+G+F
Sbjct: 61  KLPNGLNIGAGTKVVATQKMFSQGNMLTTDNSLDLMIEGPGFFEVQLPDGTPAYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF--NVGEKGEISQKGKVIATMGLYSVD 164
            + D G +V+    Y +    ++P             V  K   + + +VI  + +    
Sbjct: 121 SLDDTGQIVTPGSGYVLQPAITIPENATGITVSAGGEVSVKIPGTAESQVIGQITMTDFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +  +                    +++G LE SN N   E+  +I   + 
Sbjct: 181 NPSGLDPLGQNLYTETGASGTPIQGTASLDGLGAIRQGALETSNVNVTEELVNLIQSQRI 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   ++ +    +N+
Sbjct: 241 YEMNSKVISAVDQMLAYINQNL 262


>gi|317050614|ref|YP_004111730.1| flagellar hook-basal body protein [Desulfurispirillum indicum S5]
 gi|316945698|gb|ADU65174.1| flagellar hook-basal body protein [Desulfurispirillum indicum S5]
          Length = 259

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 47/254 (18%), Positives = 99/254 (38%), Gaps = 15/254 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDIDQKIS 57
           M        +  +   ++L   A+N++N +TVGF+   +    F       + D  ++  
Sbjct: 1   MVNGLYTSASGMVLQSRKLDASANNLANVNTVGFKKDIISVDNFRAKSTTREEDAWRRTL 60

Query: 58  FVASGKEYLS-------KEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTD 110
           F  +     +          G+   TG  LD  + G+A+  +++P G   TR G  ++  
Sbjct: 61  FNETINNTHNIAKIHVDHSQGALHQTGNSLDVGINGNAFLVVDTPFGERYTRGGNLQIDS 120

Query: 111 DGSLVSASGKYPVL-----DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +G L +  G          D          +     +  +GEI    + IAT+ L   + 
Sbjct: 121 EGRLTTKEGYPLKAALEEDDAEGPAHIFLPEASDIIINAQGEIFVDEEFIATLSLVRFED 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225
            +   +   + ++               + +G+LE SN N + EM  M+ L + F++   
Sbjct: 181 ERDLRKVGFNQLARVSADVEAYPAEHFELHQGYLESSNVNIVREMTDMVELNRSFSAYQK 240

Query: 226 LIDENEKSMLEAIR 239
           +I   ++++   ++
Sbjct: 241 MISSIDETVSTLLQ 254


>gi|153834448|ref|ZP_01987115.1| flagellar basal-body rod protein FlgG [Vibrio harveyi HY01]
 gi|156973589|ref|YP_001444496.1| flagellar basal body rod protein FlgG [Vibrio harveyi ATCC
           BAA-1116]
 gi|269961601|ref|ZP_06175963.1| flagellar basal-body rod protein FlgG [Vibrio harveyi 1DA3]
 gi|148869144|gb|EDL68176.1| flagellar basal-body rod protein FlgG [Vibrio harveyi HY01]
 gi|156525183|gb|ABU70269.1| hypothetical protein VIBHAR_01292 [Vibrio harveyi ATCC BAA-1116]
 gi|269833642|gb|EEZ87739.1| flagellar basal-body rod protein FlgG [Vibrio harveyi 1DA3]
          Length = 262

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 47/262 (17%), Positives = 95/262 (36%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +  +      A +  ++T+++N++N  TVG++  +  F ++     N    +     
Sbjct: 1   MHPALWVSKTGLDAQQTNIATISNNLANASTVGYKKSRAVFEDLFYQNINQPGGQSSQNT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    +             G+  +T   LD  +EGD +F +  P   I  TR+G+F
Sbjct: 61  ELPSGLMLGAGSKVVATQKVHTHGNAQTTTNALDMMVEGDGFFQVTLPDGNIGYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD--EIFNVGEKGEISQKGKVIATMGLYSVD 164
            +  +G+LV++   YPV     +P             V  +    Q   V+  + +    
Sbjct: 121 TLDGEGTLVTSGSGYPVEPEIVIPEDAISITVGTDGEVSVRIRGEQNNVVVGQLTITDFV 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +   P       ++          +++  LE SN N   E+  MI   + 
Sbjct: 181 NPGGLEPIGQNLYLPTGASGDPQEGVPGLDGLGEIRQSMLEASNVNVTEELVNMIEAQRV 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   +K M    + +
Sbjct: 241 YEMNSKVISSVDKMMSFVNQQL 262


>gi|90422610|ref|YP_530980.1| flagellar basal body rod protein FlgG [Rhodopseudomonas palustris
           BisB18]
 gi|90104624|gb|ABD86661.1| Flagellar basal-body rod FlgG [Rhodopseudomonas palustris BisB18]
          Length = 262

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 39/256 (15%), Positives = 84/256 (32%), Gaps = 21/256 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----------- 50
             +  I      A +  +  +A+N++N +T  ++  + +F+++   I             
Sbjct: 1   MRALAIAATGMSAQQLNVEVIANNIANINTTSYKRARAEFTDLFYQIDRMQGVPNRVGEG 60

Query: 51  ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
              +  +    V S         G+   TG   D A+ G  WF +  P    + TR G F
Sbjct: 61  AVPEGAKLGLGVRSAAVRKLHLQGALTQTGNPYDLAVNGRGWFQVVGPNGETLYTRAGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE-KGEISQKGKVIATMGLYSVDM 165
               DG LV+A G      +      +            K +     + +  + L +   
Sbjct: 121 NTNADGQLVTADGYNVDPAILIPQGTVEVTVNESGQVFAKLDGEITPRELGRLTLANFAN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++     +                 +   +LE SN + + E+ ++I   + +
Sbjct: 181 EAGLDPLGSNLYKETLSSGVPVVGVPGDPGFGKIYHHYLESSNVDPVKEITELISAQRSY 240

Query: 221 NSITTLIDENEKSMLE 236
              + +I   ++    
Sbjct: 241 EMNSKVITAADEMAQT 256


>gi|225181584|ref|ZP_03735025.1| flagellar basal body rod protein [Dethiobacter alkaliphilus AHT 1]
 gi|225167692|gb|EEG76502.1| flagellar basal body rod protein [Dethiobacter alkaliphilus AHT 1]
          Length = 259

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 47/257 (18%), Positives = 85/257 (33%), Gaps = 19/257 (7%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
                       A +Q++   A N++N +T G++     FS++V                
Sbjct: 3   IRGLWNAAGGMRAQQQKIDVTAHNIANVNTTGYKKKTTLFSDLVYQSIERRGNAVEPAAA 62

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP-RGIILTRDGRFK 107
                                 G+++ T  +LD A+ GD +F +  P  G+  TRDG F 
Sbjct: 63  GEHPKTVGVGSKVAAIRSDLRPGTYLQTDRDLDMAIVGDGYFQITLPGGGMAYTRDGSFS 122

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
              +G++V++ G   V        Q                      +  + L   D   
Sbjct: 123 RDSEGNIVNSQGYRVVFPQL-PEGQYEVNVAPEGAVSAVYEDGTVVPLGMLQLAYFDNPH 181

Query: 168 GFVRRENSGISPNIPPTPLE---DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224
           G  +  ++ +                G  V +G+LE SN +   EM Q+I   + F   +
Sbjct: 182 GLEQLGDNLLQATPASGAALLAFPGEGSRVSQGYLESSNVDLAAEMTQLIINQRSFELNS 241

Query: 225 TLIDENEKSMLEAIRNI 241
             +   E+ M      +
Sbjct: 242 RALRTAEE-MWSIANQL 257


>gi|312115249|ref|YP_004012845.1| flagellar basal-body rod protein FlgG [Rhodomicrobium vannielii
           ATCC 17100]
 gi|311220378|gb|ADP71746.1| flagellar basal-body rod protein FlgG [Rhodomicrobium vannielii
           ATCC 17100]
          Length = 261

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 41/259 (15%), Positives = 89/259 (34%), Gaps = 20/259 (7%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             + ++     +A +  +  +A+N++N +TV F+  + +F++++   +            
Sbjct: 1   MRALSVAATGMVAQQTNVEVIANNIANANTVAFKRSRAEFADLLYQSERAAGVPNRSDAD 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRF 106
                 Q    V           GS   TG  LD AL G  WF +  +    + TR G F
Sbjct: 61  AIPEASQIGLGVQPVAIRSLHTQGSLTKTGNSLDLALNGRGWFQITGANNETLYTRAGTF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
                G LV+  G   +  +         +            +     +  + + +    
Sbjct: 121 SKNASGQLVTPDGYTVIPSITIPTNTTSIQVNTDGTVYVDPGTGVMAQVGQLTIATFVND 180

Query: 167 QGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221
            G     N+     I     +          TV++ ++E SN + + E+  +I   + + 
Sbjct: 181 AGLEALGNNLFRETISSGSAQVQVPGSEGYATVQQYYVESSNVDPVQEITNLISAQRNYE 240

Query: 222 SITTLIDENEKSMLEAIRN 240
             + +I   ++      +N
Sbjct: 241 MNSKVIQAADEMFQVLTKN 259


>gi|168335334|ref|ZP_02693430.1| Flagellar basal body and hook proteins [Epulopiscium sp. 'N.t.
           morphotype B']
          Length = 256

 Score =  163 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 51/257 (19%), Positives = 105/257 (40%), Gaps = 18/257 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDI----- 52
           M               +R+  ++++++N++T  +R        F EV+    + I     
Sbjct: 1   MVRGLYTAATGMQVQTRRMDVISNDLANSNTTAYRKDYAVVEAFDEVLMKRLDGINEPPW 60

Query: 53  -----DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107
                   ++       Y     G+ I TG   + A+ G  +F +E+P G  LTRDG F 
Sbjct: 61  RYKDLGTVMNGAKVADIYTDFRPGNLILTGISNNLAINGLGFFRVETPNGERLTRDGSFT 120

Query: 108 VTDDGSLVSASGKYPVLDMASVP--IQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           V  DG LV+A G   + +   +        +     V   G++      I T+ + +VD 
Sbjct: 121 VNGDGVLVTAXGYPVLGENGQIALGRTFLNEGREMQVLPDGQVVLNTVTINTIDIVNVDD 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225
            Q  V+  ++            +     +++G+LE SN N +  M  MI +++ + +   
Sbjct: 181 PQLLVKEADNLFDATGLQLNPIN---SLIEQGYLESSNVNPVNAMVDMISVSRAYEANQR 237

Query: 226 LIDENEKSMLEAIRNIA 242
           ++  +++ +  A+ ++ 
Sbjct: 238 MVQIHDELVGRAVNDVG 254


>gi|160876201|ref|YP_001555517.1| flagellar basal body rod protein FlgG [Shewanella baltica OS195]
 gi|160861723|gb|ABX50257.1| flagellar basal-body rod protein FlgG [Shewanella baltica OS195]
 gi|315268391|gb|ADT95244.1| flagellar basal-body rod protein FlgG [Shewanella baltica OS678]
          Length = 262

 Score =  163 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 41/262 (15%), Positives = 94/262 (35%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  I      A +  ++ +++N++N  TVG++  +  F +++    N          
Sbjct: 1   MHPALWISKTGLDAQQTDIAVISNNVANASTVGYKKSRAVFEDLLYQTVNQAGGVSASNT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                    +             G+ ++T   LD  +EG  +F ++ P G    TR+G+F
Sbjct: 61  KLPNGLNIGAGTKVVATQKMFTQGNMLTTDNSLDLMIEGPGFFEIQLPDGTAAYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE--KGEISQKGKVIATMGLYSVD 164
            + D G +V+    Y +    ++P                K   + + +V+  + +    
Sbjct: 121 TLDDTGQIVTPGSGYLLQPAITIPDNATSITVSAEGEVSVKTPGTAENQVVGQLTMTDFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +  +                    +++G LE SN N   E+  +I   + 
Sbjct: 181 NPSGLDPMGQNLYTETGASGTPIQGTASLDGMGAIRQGALETSNVNVTEELVNLIESQRI 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   ++ +    +N+
Sbjct: 241 YEMNSKVISAVDQMLSYVTQNL 262


>gi|259907636|ref|YP_002647992.1| Flagellar basal-body rod protein, FlgG [Erwinia pyrifoliae Ep1/96]
 gi|224963258|emb|CAX54742.1| Flagellar basal-body rod protein, FlgG [Erwinia pyrifoliae Ep1/96]
 gi|283477478|emb|CAY73394.1| Flagellar basal-body rod protein flgG [Erwinia pyrifoliae DSM
           12163]
          Length = 260

 Score =  163 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 89/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A +  +  +++N++N  + GF+  +  F +++               
Sbjct: 1   MIRSLWIAKTGLEAQQTNMDVISNNLANVGSTGFKRQRAVFQDLLYQTMRQPGAQASEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + VA+         GS   TG + D A++G  +F ++ P      TRDG F
Sbjct: 61  TLPTGMQLGTGVATVATQRMHTQGSLTQTGRDYDMAIQGKGFFQVQLPDGTTAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
            + ++G +V+A G     D+            E   V          + I  + L +   
Sbjct: 121 SLNENGQMVTAEGNPVQPDITVPADAQKLTVGEDGIVTATVPGQAAPQQIGQLTLANFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +                       +K  ++E SN N   E+  MI + + +
Sbjct: 181 DAGLESLGGNLYVETQASGAPNEATPGMDGAGRLKHQYIETSNVNVAEELVTMIQVQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ +    +
Sbjct: 241 EINSKAVSASDQMLQRLAQ 259


>gi|254461663|ref|ZP_05075079.1| flagellar basal-body rod protein FlgG [Rhodobacterales bacterium
           HTCC2083]
 gi|206678252|gb|EDZ42739.1| flagellar basal-body rod protein FlgG [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 262

 Score =  163 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 47/259 (18%), Positives = 103/259 (39%), Gaps = 20/259 (7%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------- 55
            + ++      A + R+  +A+N+SN +TVGF++ +V F  ++  +K     +       
Sbjct: 4   NAMHVAKTGLNAQQTRMQVIANNLSNLNTVGFKSDRVNFESLLYQVKRGGGDQTSEGTEL 63

Query: 56  ------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKV 108
                  + V +         G  ++T    D A++G  +F +  P   +  TR+G F  
Sbjct: 64  TSALALGTGVRAVNTQKLYSQGGMVNTDNSFDLAIDGQGFFQVLIPDGRVGYTRNGSFSR 123

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIP-QKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           + +G+L +ASG     ++      +     +   V  +    ++ + +  + L S    +
Sbjct: 124 SAEGALTTASGYVVQPEIRIPDDVVEVNVSQDGIVSVRSAAQKEPQEVGQLTLASFANPR 183

Query: 168 GFVRRENS-GISPNIPPTP----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222
           G      S  +       P     +      + +G LE SN N + ++ +MI   + +  
Sbjct: 184 GLQPVGESFLVQTAASGDPTVASPQAQGIGKLVQGSLESSNVNVVQQLVEMIETQRAYEV 243

Query: 223 ITTLIDENEKSMLEAIRNI 241
            +  I  +++ M     N+
Sbjct: 244 SSKSITASDEMMRYISNNL 262


>gi|91785632|ref|YP_560838.1| flagellar basal body rod protein FlgG [Burkholderia xenovorans
           LB400]
 gi|91689586|gb|ABE32786.1| flgG; flagellar basal-body rod protein [Burkholderia xenovorans
           LB400]
          Length = 262

 Score =  163 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 90/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A + ++  +++N++N  T GF+  +  F +++               
Sbjct: 1   MNRSLYIAATGMNAQQAQMDVISNNLANVSTNGFKGSRAVFEDLLYQTIRQPGANSTQNT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+   TG   D A+ G  +F ++ P      TRDG F
Sbjct: 61  ELPSGIQLGTGVQQVATERLYTQGNLQQTGNSKDVAINGQGFFQVQMPDGTTAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           +    G LV++SG   +  +                V      S   + + +M + +   
Sbjct: 121 QTNAQGQLVTSSGYQVIPAITIPNNATSLTIGSDGVVSITVAGSTNSQQLGSMQIATFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   +  +  +                   T+ +G++E SN N + E+  MI   + +
Sbjct: 181 PAGLDAKGENLFAETASSGAPNVAQPGLNGAGTLNQGYVEASNVNVVQELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ +    +
Sbjct: 241 EINSKAVTTSDQMLQTLSQ 259


>gi|222147565|ref|YP_002548522.1| flagellar basal body rod protein FlgF [Agrobacterium vitis S4]
 gi|221734553|gb|ACM35516.1| flagellar basal body rod protein [Agrobacterium vitis S4]
          Length = 244

 Score =  163 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 102/242 (42%), Positives = 157/242 (64%), Gaps = 1/242 (0%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           MQ+   + L++Q AL++RL+T+ADNM+N +TVGFR  +VKF EVV    ND + KI+FV+
Sbjct: 1   MQSGMYVSLSSQRALDKRLTTIADNMANVNTVGFRGTEVKFDEVVSRTGNDQNAKIAFVS 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
            G +YL+ + G  + TG  LDFA++GDAWF++++P G  LTRDGRF +T  G LVS  G 
Sbjct: 61  QGNDYLNTQSGEMLQTGGTLDFAVKGDAWFSIDTPAGPALTRDGRFTMTSTGQLVSVRGY 120

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
              LD    PIQ+       +VG  G I+Q G+ I+ +GL++ D+S+G++R ENSG+   
Sbjct: 121 SV-LDAGGGPIQLDPNGGEPHVGADGTINQNGRQISQIGLFTADISKGYLRTENSGVITT 179

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
             P  + D + + V +G++E SN N + +M Q+I +++ F SI+  + + E SM E I+ 
Sbjct: 180 DRPQAVVDDATIGVMQGYVEQSNVNGISQMTQLIQVSRAFESISASMSQTENSMSETIKT 239

Query: 241 IA 242
           + 
Sbjct: 240 LG 241


>gi|254182892|ref|ZP_04889485.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           1655]
 gi|254299684|ref|ZP_04967133.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           406e]
 gi|157809479|gb|EDO86649.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           406e]
 gi|184213426|gb|EDU10469.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           1655]
          Length = 262

 Score =  163 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 50/259 (19%), Positives = 94/259 (36%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  I      A + +L  VA+N++N +TVGF+  +V F ++   ++           
Sbjct: 1   MNQAMWISKTGLQAQDAKLQAVANNLANVNTVGFKRDRVVFEDLFYRVERQPGAQLDQDN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                 Q  S             GS  +TG  LD A+ G  +  +    G    TR G+ 
Sbjct: 61  ASPSGIQMGSGTRIVGTQKIFTDGSVQTTGQSLDVAVMGKGFIQVLMANGETGYTRAGQL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
            +  +G LV+A G     +++           E   V      +     +  + L +   
Sbjct: 121 SINAEGLLVNAQGLPLQPEISIPENATDIAIGENGIVAATMPGASSPSEVGQIQLANFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G +   ++     +   P  +    T     +K+G LE SN   + EM  MI   + +
Sbjct: 181 PAGLLALGDNLYMETVASGPPNEGEPGTDVFGKIKQGALEGSNVQVVEEMVDMIAAQRTY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              T ++   +  + +  +
Sbjct: 241 EMNTKVLSAADNMLQQLSQ 259


>gi|310764858|gb|ADP09808.1| Flagellar basal-body rod protein, FlgG [Erwinia sp. Ejp617]
          Length = 260

 Score =  163 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 89/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A +  +  +++N++N  + GF+  +  F +++               
Sbjct: 1   MIRSLWIAKTGLEAQQTNMDVISNNLANVGSTGFKRQRAVFQDLLYQTMRQPGAQASEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + VA+         GS   TG + D A++G  +F ++ P      TRDG F
Sbjct: 61  TLPTGMQLGTGVATVATQRMHTQGSLTQTGRDYDMAIQGKGFFQVQLPDGTTAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
            + ++G +V+A G     D+            E   V          + I  + L +   
Sbjct: 121 SLNENGQMVTAEGNPLQPDITVPADAQKLTVGEDGIVTATVPGQAAPQQIGQLTLANFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +                       +K  ++E SN N   E+  MI + + +
Sbjct: 181 DAGLESLGGNLYVETQASGAPNEATPGMDGAGRLKHQYIETSNVNVAEELVTMIQVQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ +    +
Sbjct: 241 EINSKAVSASDQMLQRLAQ 259


>gi|87306343|ref|ZP_01088490.1| flagellar hook basal body protein flgG [Blastopirellula marina DSM
           3645]
 gi|87290522|gb|EAQ82409.1| flagellar hook basal body protein flgG [Blastopirellula marina DSM
           3645]
          Length = 266

 Score =  163 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 40/261 (15%), Positives = 93/261 (35%), Gaps = 24/261 (9%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK-------------ND 51
                     L+ +L  +++N++N +T  F+  ++ F ++    +               
Sbjct: 6   LYTAATGMQTLQTKLDVISNNLANVNTTAFKKDRINFEDLFYDNRVLPGKLDGSSNPTPT 65

Query: 52  IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTD 110
                  V         + G+F  T   LD+ + G  +F +  P      TR G F +  
Sbjct: 66  GTHIGMGVRVQSTQTDYQQGAFRETDRSLDWTIRGKGFFQVLDPTGQTYYTRAGNFSINA 125

Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV----IATMGLYSVDMS 166
           +G +V+ S         S+ I         +      + + G+     +  + L +    
Sbjct: 126 NGEIVTGSAGVGRPLEPSITIPQDTTGIEVSSDGIVSVQRPGQQTLEEVGQIQLANFINP 185

Query: 167 QGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221
           +G ++  ++  S     +             +V++GFLE SN   + E+  +I   + F 
Sbjct: 186 EGLLKLGDNLYSETNASSAAIVGNPNIDGFGSVEKGFLEASNVEPVQELVDLITTQRAFE 245

Query: 222 SITTLIDENEKSMLEAIRNIA 242
             +  +   ++ + + + N+ 
Sbjct: 246 LNSQTVQAGDQIL-QLVSNLR 265


>gi|187925759|ref|YP_001897401.1| flagellar basal body rod protein FlgG [Burkholderia phytofirmans
           PsJN]
 gi|187716953|gb|ACD18177.1| flagellar basal-body rod protein FlgG [Burkholderia phytofirmans
           PsJN]
          Length = 262

 Score =  163 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 90/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A + ++  +++N++N  T GF+  +  F +++               
Sbjct: 1   MNRSLYIAATGMNAQQAQMDVISNNLANVSTNGFKGSRAVFEDLLYQTVRQPGANSTQNT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+   TG   D A+ G  +F ++ P      TRDG F
Sbjct: 61  ELPSGIQLGTGVQQVATERLYTQGNLQQTGNSKDVAINGQGFFQVQMPDGTTAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           +    G LV++SG   +  +                V      S   + + +M + +   
Sbjct: 121 QTNAQGQLVTSSGYQVIPAITIPNNATSLTIGSDGVVSITVAGSTNSQQLGSMQIATFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   +  +  +                   T+ +G++E SN N + E+  MI   + +
Sbjct: 181 PAGLDAKGENLFAETASSGAPNVAQPGLNGAGTLNQGYVEASNVNVVQELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ +    +
Sbjct: 241 EINSKAVTTSDQMLQTLSQ 259


>gi|83594175|ref|YP_427927.1| flagellar basal body rod protein FlgG [Rhodospirillum rubrum ATCC
           11170]
 gi|83577089|gb|ABC23640.1| conserved hypothetical protein [Rhodospirillum rubrum ATCC 11170]
          Length = 261

 Score =  163 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 45/257 (17%), Positives = 95/257 (36%), Gaps = 21/257 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             + NIG    LA +  +  +++N++N +T  +   + +F +++                
Sbjct: 1   MRALNIGATGMLAQQTNVEVISNNIANMNTTAYTRRRAEFHDLLYQNLRRAGSNSSDTGT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q    V +   Y   E GS  ST   LD A++G  +F ++ P      TRDG F
Sbjct: 61  IVPTGVQLGLGVKTAAVYRITEQGSVTSTNNALDLAIQGKGYFQIDLPSGETAYTRDGAF 120

Query: 107 KVTDDGSLVSASGKYPV-LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +++ +G +V+  G     L       +    +    V  K +          +       
Sbjct: 121 QLSPNGEIVTHDGYRVTGLGAIPTNAESITINPTGEVLYKIDGQTALVNAGQIQTAIFPN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++ ++                   T+ +G+LE SN N + E+ ++I   + +
Sbjct: 181 DAGLNAIGDNYLTETAGSGAPTVGVPGSVGFGTILQGYLESSNVNVVSEITELISAQRAY 240

Query: 221 NSITTLIDENEKSMLEA 237
              + +I  +++ +   
Sbjct: 241 EMNSKVITTSDEMLSTI 257


>gi|134280724|ref|ZP_01767434.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           305]
 gi|167725932|ref|ZP_02409168.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei
           DM98]
 gi|125657220|gb|ABN48708.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei]
 gi|134247746|gb|EBA47830.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           305]
          Length = 262

 Score =  163 bits (411), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 50/259 (19%), Positives = 94/259 (36%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  I      A + +L  VA+N++N +TVGF+  +V F ++   ++           
Sbjct: 1   MNQAMWISKTGLQAQDAKLQAVANNLANVNTVGFKRDRVVFEDLFYRVERQPGAQLDQDN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                 Q  S             GS  +TG  LD A+ G  +  +    G    TR G+ 
Sbjct: 61  ASPSGIQMGSGTRIVGTQKIFTDGSVQTTGQSLDVAVMGKGFIQVLMANGETGYTRAGQL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
            +  +G LV+A G     +++           E   V      +     +  + L +   
Sbjct: 121 SINAEGLLVNAQGLPLQPEISIPENAADIAIGENGIVAATMPGASSPSEVGQIQLANFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G +   ++     +   P  +    T     +K+G LE SN   + EM  MI   + +
Sbjct: 181 PAGLLALGDNLYMETVASGPPNEGEPGTDVFGKIKQGALEGSNVQVVEEMVDMIAAQRTY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              T ++   +  + +  +
Sbjct: 241 EMNTKVLSAADNMLQQLSQ 259


>gi|187478187|ref|YP_786211.1| flagellar basal body rod protein FlgG [Bordetella avium 197N]
 gi|115422773|emb|CAJ49301.1| flagellar basal-body rod protein [Bordetella avium 197N]
          Length = 261

 Score =  163 bits (411), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 39/260 (15%), Positives = 84/260 (32%), Gaps = 21/260 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      + +  +  ++ N++N  T GF+  +  F +++               
Sbjct: 1   MMRSLWIAKTGLESQQTSMDVISHNLANVQTNGFKRERAVFQDLMYQTLRQPGAQVGDAN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  +             G+  +TG E+D A++G  +F ++ P G    TRDG  
Sbjct: 61  QLPTGLQLGTGARVAATQRLHSAGNLNNTGAEMDVAIQGRGFFQVDLPDGTQAYTRDGGL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG--KVIATMGLYSVD 164
            +  +G L +  G      +      +        V         G    I  + + +  
Sbjct: 121 GMDQNGQLTTMGGYVIQPPINVPDNALSMAINKEGVVSVTLPGNAGVNVQIGQLQVATFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +         P            ++ + ++E SN N   E+  MI   + 
Sbjct: 181 NPAGLQSVGENLYLETDASGPANLLQPGADGAGSIMQNYVETSNVNVAEELVNMITAQRA 240

Query: 220 FNSITTLIDENEKSMLEAIR 239
           +   +  +  +++ +    +
Sbjct: 241 YEMNSKAVKTSDEMLARLTQ 260


>gi|312136040|ref|YP_004003378.1| fagellar hook-basal body protein [Caldicellulosiruptor owensensis
           OL]
 gi|311776091|gb|ADQ05578.1| fagellar hook-basal body protein [Caldicellulosiruptor owensensis
           OL]
          Length = 255

 Score =  163 bits (411), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 50/258 (19%), Positives = 100/258 (38%), Gaps = 21/258 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVV--------GAIK 49
           M        +  +  ++ +   A+N++N  T GF+        F  ++         +  
Sbjct: 1   MIRGIYTSASGMILNQKLMDITANNVANVSTTGFKRDVAQVESFRNMLVYRIYDKTSSPD 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-----ILTRDG 104
           N I          +       G +I T   L+ A+ G+ +F +E P        + TR+G
Sbjct: 61  NAIGYMSLGSDVSRIVSDFSQGLYIKTDEPLNLAIRGNGFFTVEVPESEGGQQVLYTRNG 120

Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
            F +   G LV+  G Y +         + Q      + ++G I Q G+ +  + +    
Sbjct: 121 AFTLNSRGELVTIDGFYVLG---QNGRIVLQNHGQIRIDDQGNIYQNGRFVDRLRIVDFQ 177

Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224
             Q   +  N+    +      +      + +G+LE SN NS+ EM  MI++ + + +  
Sbjct: 178 DKQLLRKVGNNLFEADAG--AQQIPFSGKILQGYLEGSNVNSVQEMVNMINVLRAYEANQ 235

Query: 225 TLIDENEKSMLEAIRNIA 242
                 ++++ +AI  IA
Sbjct: 236 KAFTIQDETLQKAISEIA 253


>gi|24374755|ref|NP_718798.1| flagellar basal body rod protein FlgG [Shewanella oneidensis MR-1]
 gi|24349419|gb|AAN56242.1|AE015761_12 flagellar basal-body rod protein FlgG [Shewanella oneidensis MR-1]
          Length = 262

 Score =  163 bits (411), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 41/262 (15%), Positives = 93/262 (35%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  I      A +  +S +++N++N  TVG++  +  F +++    N          
Sbjct: 1   MHPALWISKTGLDAQQTDISVISNNVANASTVGYKKSRAVFEDLLYQTVNQAGGISASNT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    +             G+ ++T   LD  +EG  +F ++ P      TR+G+F
Sbjct: 61  KLPNGLNIGAGTKVVATQKMFTQGNMLTTDNSLDLMIEGPGFFEIQLPDGTTAYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE--KGEISQKGKVIATMGLYSVD 164
            + D G +V+    Y +    ++P                K   + + +V+  + +    
Sbjct: 121 TLDDTGQIVTPGSGYVLQPPITIPEDATSITVSAEGEVSVKTPGAAENQVVGQLSMTDFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +  +                    +++G LE SN N   E+  +I   + 
Sbjct: 181 NPSGLDPMGQNLYTETGASGTPIQGTASLDGMGAIRQGALETSNVNVTEELVNLIESQRI 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   ++ +    +N+
Sbjct: 241 YEMNSKVISAVDQMLAYVNQNL 262


>gi|317047693|ref|YP_004115341.1| flagellar basal-body rod protein FlgG [Pantoea sp. At-9b]
 gi|316949310|gb|ADU68785.1| flagellar basal-body rod protein FlgG [Pantoea sp. At-9b]
          Length = 260

 Score =  163 bits (411), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 85/259 (32%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S  I      A +  +  +A+N++N  T GF+  +  F +++         +     
Sbjct: 1   MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRSRAVFEDLMYQTVRQPGTQSSEQT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                    + V           G+   T    D A+ G  +F ++ P G    TRDG F
Sbjct: 61  TLPSGMQIGTGVRPVTTERLHTQGNLSQTSNSKDLAINGQGYFEVQMPDGTSAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V  +G LV+ SG      +                V    +       +  + L +   
Sbjct: 121 QVDQNGQLVTNSGYTVQPGITIPANATSITVSRDGIVSVTQQGQTNPTQVGQLTLSTFMN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +              +        + +G++E SN N   E+  MI   + +
Sbjct: 181 DAGLDSLGENLYQETQASGAATQSTPGQNGAGLLYQGYVETSNVNVAEELVSMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ + +  +
Sbjct: 241 EINSKAVSTSDQMLAKLTQ 259


>gi|163852465|ref|YP_001640508.1| flagellar basal body rod protein FlgF [Methylobacterium extorquens
           PA1]
 gi|163664070|gb|ABY31437.1| flagellar basal body rod protein [Methylobacterium extorquens PA1]
          Length = 246

 Score =  163 bits (411), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 63/247 (25%), Positives = 118/247 (47%), Gaps = 9/247 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN-----DIDQK 55
           MQ +  +G++AQ AL + L  +A+NM+N  T GF+    +F E +  + +       D++
Sbjct: 1   MQNALFVGVSAQTALARELDVIANNMANVSTTGFKARSARFQEYLMPVASADSFQRSDRR 60

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115
           +S+V      L    GS       +  AL GDA+  +++P+G+  TR+G F++   G+LV
Sbjct: 61  LSYVIDQGTPLDLTQGSVEPDSNPMHVALRGDAFLTVQTPQGLRYTRNGAFELDATGNLV 120

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
           ++ G     D    PI I Q++    +   G IS    +   + L +   +Q       +
Sbjct: 121 TSDGHAVQGD--GGPITIGQQETGLAIAPDGTISTNLGIRGRLRLVTFPNAQALKSEGAN 178

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
             S   P  P    +   ++ G LE SN   + EM +++ + + ++ ++++I   +    
Sbjct: 179 LFSSEAPARPAGPGAH--LEPGALERSNVKPVVEMTRLMDVNRTYSMVSSVISRLDDLRG 236

Query: 236 EAIRNIA 242
            AIR +A
Sbjct: 237 TAIRRLA 243


>gi|126444737|ref|YP_001061248.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei
           668]
 gi|126224228|gb|ABN87733.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei
           668]
          Length = 262

 Score =  163 bits (411), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 49/259 (18%), Positives = 94/259 (36%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  I      A + +L  VA+N++N +TVGF+  +V F ++   ++           
Sbjct: 1   MNQAMWISKTGLQAQDAKLQAVANNLANVNTVGFKRDRVVFEDLFYRVERQPGAQLDQDN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRF 106
                 Q  S             GS  +TG  LD A+ G  +  +  +      TR G+ 
Sbjct: 61  ASPSGIQMGSGTRIVGTQKIFTDGSVQTTGQSLDVAVMGKGFIQVLMANGDTGYTRAGQL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
            +  +G LV+A G     +++           E   V      +     +  + L +   
Sbjct: 121 SINAEGLLVNAQGLPLQPEISIPENATDIAIGENGIVAATMPGASSPSEVGQIQLANFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G +   ++     +   P  +    T     +K+G LE SN   + EM  MI   + +
Sbjct: 181 PAGLLALGDNLYMETVASGPPNEGEPGTDVFGKIKQGALEGSNVQVVEEMVDMIAAQRTY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              T ++   +  + +  +
Sbjct: 241 EMNTKVLSAADNMLQQLSQ 259


>gi|91204383|emb|CAJ70883.1| strongly similar to flagellar distal rod protein [Candidatus
           Kuenenia stuttgartiensis]
          Length = 262

 Score =  163 bits (411), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 48/262 (18%), Positives = 102/262 (38%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +         A +  L  V++N+SN +T GF+  +V F +++ + +           
Sbjct: 1   MLRALYTAATGMKAQQLFLDNVSNNLSNINTTGFKRSQVNFQDLLYSKRYIAGSESAQGF 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106
                 Q    V +         G+ ++T  ELD A++G  +F ++     I  TRDG F
Sbjct: 61  EIPAGIQLGGGVRTISISKVFSQGNHVNTERELDLAIQGKGFFQIQQSDGSIAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLD-MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           ++   G +V+A G         +   +I    +     +  + S   + +  + L     
Sbjct: 121 QLNSKGEVVTADGLPLSPSITITNATEISIGTDGTVYVKGSDPSGTLQNVGQIMLTMFPN 180

Query: 166 SQGFVRRENSGI-SPNIPPTPLE----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +         +P+     +     + +GFLE+SN  ++ E+  +I   + +
Sbjct: 181 PSGLDSLGKNLYLETMASGSPIVTVAGEQGTGEIYQGFLENSNVETVTELVSLITAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNIA 242
              +  I  +++ +   I ++A
Sbjct: 241 EINSRAISASDEML-STINSMA 261


>gi|24214555|ref|NP_712036.1| endoflagellar distal basal body rod protein [Leptospira interrogans
           serovar Lai str. 56601]
 gi|45657887|ref|YP_001973.1| hook protein [Leptospira interrogans serovar Copenhageni str.
           Fiocruz L1-130]
 gi|24195518|gb|AAN49054.1| endoflagellar distal basal body rod protein [Leptospira interrogans
           serovar Lai str. 56601]
 gi|45601128|gb|AAS70610.1| hook protein [Leptospira interrogans serovar Copenhageni str.
           Fiocruz L1-130]
          Length = 287

 Score =  163 bits (411), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 50/285 (17%), Positives = 101/285 (35%), Gaps = 44/285 (15%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKF------------SEVVGAI 48
           M      G    +  + R+  +++N++N D   F+     F             + VG +
Sbjct: 1   MLRGIYTGANGMIIQQTRMDVISNNLANVDKTAFKRDTTIFKTFPELLLHRFDEDGVGKV 60

Query: 49  KND-------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA------WFALESP 95
                     I +        + Y   E G+   T    D  L+         +F++ + 
Sbjct: 61  PMGSFDTAPVIGKLGLGGEVNEVYTRFEQGAVKKTENPFDLMLQDKPGSEHPAFFSVMTN 120

Query: 96  RGIILTRDGRFKVTDDGSLVSASGKYPVLDMASV-----PIQIPQKDEIFNVGEKGEISQ 150
           RG  L+R G F +  +G LV+  G   + +   +        I +  E++  GE G    
Sbjct: 121 RGERLSRSGAFVMDTNGFLVTPQGFPLLGENGPIRVARGNFLIKENGEVWINGEIGNDPV 180

Query: 151 KGKVIATMGL-----------YSVDMSQGFVRRENSGISPN---IPPTPLEDLSGVTVKR 196
            G  I                 +V+  +   +  +S  +       P P +     +V +
Sbjct: 181 NGTSIDKNRFETPVLLDKIKIRTVENPRHLDKEGDSFYADTPESGEPVPFDLKDEPSVLQ 240

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           G+LE SN + + EM +MI + + + +    +   +  + + I  +
Sbjct: 241 GYLEASNVSVVTEMVEMIEVNRSYEANQKTVQTQDSLLGKLINEV 285


>gi|119775448|ref|YP_928188.1| flagellar basal body rod protein FlgG [Shewanella amazonensis SB2B]
 gi|119767948|gb|ABM00519.1| flagellar basal-body rod protein FlgG [Shewanella amazonensis SB2B]
          Length = 262

 Score =  163 bits (411), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 40/262 (15%), Positives = 92/262 (35%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  I      A +  ++ +++N++N  TVG++  +  F +++    N          
Sbjct: 1   MHPALWISKTGLDAQQTDIAVISNNVANASTVGYKKSRAVFEDLLYQTVNQAGGISASNT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    +             G+ ++T   LD  +EG  +F ++ P      TR+G+F
Sbjct: 61  KLPNGLNIGAGTKVVATQKMFTQGNMLTTDNALDMMIEGPGFFEIQLPDGTTAYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE--KGEISQKGKVIATMGLYSVD 164
            + D G +V+    Y +    ++P                K   + + +++  + L    
Sbjct: 121 SLDDTGQIVTPGSGYVLQPAITIPDNATSITVSAEGEVSVKTPGAAESQIVGQLTLSDFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +                       +++G LE SN N   E+  +I   + 
Sbjct: 181 NPSGLDPIGQNLYLETGASGTPIQGTASLDGMGAIRQGALETSNVNVTEELVNLIESQRI 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   ++ +    +N+
Sbjct: 241 YEMNSKVISAVDQMLAYVNQNL 262


>gi|127512281|ref|YP_001093478.1| flagellar basal body rod protein FlgG [Shewanella loihica PV-4]
 gi|126637576|gb|ABO23219.1| flagellar basal-body rod protein FlgG [Shewanella loihica PV-4]
          Length = 262

 Score =  163 bits (411), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 41/262 (15%), Positives = 92/262 (35%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  I      A +  +S +++N++N  TVG++  +  F +++    N          
Sbjct: 1   MHPALWISKTGLDAQQTDISVISNNVANASTVGYKKSRAVFEDLLYQTVNQAGGISASNT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    +             G+ ++T   LD  +EG  +F ++ P      TR+G+F
Sbjct: 61  KLPNGLNIGAGTKVVATQKMFTQGNMLTTDNSLDLMIEGPGFFEVQLPDGTTAYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE--KGEISQKGKVIATMGLYSVD 164
            + D G +V+    Y +    ++P                K   + + +V+  + +    
Sbjct: 121 TLDDTGQIVTPGSGYVLQPAITIPDDATSITVSAEGEVSVKTPGAAENQVVGQLSMSDFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +                       +++G LE SN N   E+  +I   + 
Sbjct: 181 NPSGLDPMGQNLYLETGASGTPIQGTASLDGMGAIRQGALETSNVNVTEELVNLIESQRI 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   ++ +    +N+
Sbjct: 241 YEMNSKVISAVDQMLSYVNQNL 262


>gi|170744541|ref|YP_001773196.1| flagellar basal body rod protein [Methylobacterium sp. 4-46]
 gi|168198815|gb|ACA20762.1| flagellar basal body rod protein [Methylobacterium sp. 4-46]
          Length = 242

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 78/243 (32%), Positives = 132/243 (54%), Gaps = 5/243 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           MQ    + L+AQ+AL++RL TVA+N++N  TVG+R  + KF  V    +      ++F +
Sbjct: 1   MQNGLYVSLSAQVALQKRLDTVANNIANLATVGYRAEETKFEAVFDKARTG---PVAFAS 57

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +G  Y+S+  G  I T   LD A++GDAW +++ P    + TRDGR  +   G L S SG
Sbjct: 58  TGDTYISRLAGPTIKTDAPLDVAVQGDAWLSVQGPGGAPVYTRDGRMTMDASGQLRSVSG 117

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
             P+LD    PI +        +G  G I Q G ++ ++G++++D      R     ++ 
Sbjct: 118 -QPILDPGGAPILLDPNAGPPTIGRDGSIQQNGSLVGSLGVFTLDAKSRITRAGPGAVTS 176

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           N+P  P++D + + V +G LE +N N + EM ++I + + F++      E + S+  AIR
Sbjct: 177 NLPARPVQDFTKIGVVQGHLEGANVNPILEMTKLIAIQRAFDNAVATASEADSSLQSAIR 236

Query: 240 NIA 242
            + 
Sbjct: 237 TLG 239


>gi|222084865|ref|YP_002543394.1| flagellar basal-body rod protein [Agrobacterium radiobacter K84]
 gi|221722313|gb|ACM25469.1| flagellar basal-body rod protein [Agrobacterium radiobacter K84]
          Length = 262

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 43/261 (16%), Positives = 92/261 (35%), Gaps = 21/261 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----------- 50
             +  I      A +  L  +A+N++N +T G++  + +FS+++   +            
Sbjct: 1   MRALAIAATGMDAQQTNLEVIANNIANINTTGYKRSRAEFSDLLYQTERAKGIANRPNQA 60

Query: 51  ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
              +       V +      +  G    T  +LD AL G  WF ++ P      TR G F
Sbjct: 61  VVPEGANIGLGVQTTAVRNIQIQGELSQTSNDLDVALVGRGWFQIQMPDGTTAYTRAGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIP-QKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
             +D G +V+  G      +           ++   V      +    V+  + + +   
Sbjct: 121 NKSDTGQMVTPDGNVLQPGITIPSNASNVVINQSGQVSATIGTATTPTVLGQLQIANFVN 180

Query: 166 SQGFVRRENSGI-SPNIPPTP----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++          P      +     +K+G+LE SN + + E+  +I   + +
Sbjct: 181 EAGLQPMGSNLFTQTPASGDPVVSDPNENGFAYMKQGYLESSNVDPVKEITDLITAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
              + +I   +       +N+
Sbjct: 241 EMNSKVITTADDMAQIVSKNL 261


>gi|168335333|ref|ZP_02693429.1| hypothetical protein Epulo_09785 [Epulopiscium sp. 'N.t. morphotype
           B']
          Length = 270

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 55/266 (20%), Positives = 101/266 (37%), Gaps = 27/266 (10%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ------ 54
           M  S         + +  + T+++N++N +TVGF+   V F  ++        Q      
Sbjct: 1   MMRSLWTAATGMTSQQTHVDTISNNIANVNTVGFKQESVNFKTLLYQNMLPTQQEETTNP 60

Query: 55  ----KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT- 109
                   V  G    +   G+ I T    D A++G  +FA+++   +  TRDG FKVT 
Sbjct: 61  MLLQMGHGVRVGSISKNFGTGNLIQTNAPTDLAIDGTGFFAVQADNQVSYTRDGSFKVTT 120

Query: 110 ----------DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG 159
                      DG  V ++   P+    +V       +    VG K   + +   IA + 
Sbjct: 121 TSDGVIALVTSDGHYVLSTDSEPITFDENVLSSQITINSYGGVGYKDSETGEDINIADIM 180

Query: 160 LYSVDMSQGFVRRENSGISPNI-PPTPLEDLSGVTV-----KRGFLEDSNANSMYEMGQM 213
           +     + G     ++          PL +    T+     + G+LE SN N   EM  +
Sbjct: 181 VVQFANAAGLEATGDNLFVETAGSGVPLMESEXPTLTKSLLRAGYLEGSNVNIATEMVNL 240

Query: 214 IHLTQKFNSITTLIDENEKSMLEAIR 239
           I   + +   +  I   +  + +A++
Sbjct: 241 IVAQRAYELNSKAISTADTMLGQAVQ 266


>gi|240139802|ref|YP_002964279.1| flagellar basal-body rod protein flgF [Methylobacterium extorquens
           AM1]
 gi|240009776|gb|ACS41002.1| flagellar basal-body rod protein flgF [Methylobacterium extorquens
           AM1]
          Length = 246

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 63/247 (25%), Positives = 118/247 (47%), Gaps = 9/247 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN-----DIDQK 55
           MQ +  +G++AQ AL + L  +A+NM+N  T GF+    +F E +  + +       D++
Sbjct: 1   MQNALFVGVSAQTALARELDVIANNMANVSTTGFKARSSRFQEYLMPVASADSFQRSDRR 60

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115
           +S+V      L    G        +  AL GDA+ A+++P+G+  TR+G F++   G+LV
Sbjct: 61  LSYVIDQGTPLDLTQGPVEPDSNPMHVALRGDAFLAVQTPQGLRYTRNGAFELDATGNLV 120

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
           ++ G     D    PI I Q++    +   G IS    +   + L +   +Q       +
Sbjct: 121 TSDGHAVQGD--GGPITIGQQETGLAIAPDGTISTNLGIRGRLRLVTFANAQALKSEGAN 178

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
             S   P  P    +   ++ G LE SN   + EM +++ + + ++ ++++I   +    
Sbjct: 179 LFSSEAPGRPAGPGAH--LEPGALERSNVKPVVEMTRLMDVNRTYSMVSSVISRLDDLRG 236

Query: 236 EAIRNIA 242
            AIR +A
Sbjct: 237 TAIRRLA 243


>gi|295688785|ref|YP_003592478.1| flagellar basal-body rod protein FlgF [Caulobacter segnis ATCC
           21756]
 gi|295430688|gb|ADG09860.1| flagellar basal-body rod protein FlgF [Caulobacter segnis ATCC
           21756]
          Length = 245

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 64/244 (26%), Positives = 112/244 (45%), Gaps = 4/244 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTI--KVKFSEVVGAIKNDIDQKISF 58
           M  +  +GL+ QL L + L  VA+N++N +T GF+     V+  +   A   D    + F
Sbjct: 1   MDNALYVGLSRQLTLRRELDVVANNIANANTTGFKVEDLMVRTEQSKPAKTLDGSAPVKF 60

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSAS 118
           V           G+   TG + D A+EG  +F +++  G   TRDGRF    +G LV+ S
Sbjct: 61  VLDSGVARDFTQGAMTKTGGDFDLAIEGKGFFRVQTANGDRYTRDGRFTTNPEGQLVTQS 120

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178
           G +PVLD    PI I       ++G+ G ++Q    +  + +   D      +  ++   
Sbjct: 121 G-HPVLDEGGGPINIDPTLGQVSIGKDGIVTQGAVRVGKIAVVRPDNLASMAKDGDNLY- 178

Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            N     L+      V +G LE SN  S+ E+ ++I + + + S+  ++D   +    A+
Sbjct: 179 RNTTNATLQPAPDAVVHQGMLEASNVQSVLEITKLIQVQRAYESVAKMMDNTSELSRTAV 238

Query: 239 RNIA 242
             + 
Sbjct: 239 ERLG 242


>gi|21672606|ref|NP_660673.1| flagellar basal body rod protein FlgG [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
 gi|25008454|sp|Q8K9K4|FLGG_BUCAP RecName: Full=Flagellar basal-body rod protein flgG; AltName:
           Full=Distal rod protein
 gi|21623237|gb|AAM67884.1| flagellar basal-body rod protein FlgG [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
          Length = 260

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 92/259 (35%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S  I      A +  ++ +++N++N  T GF+  +  F +++               
Sbjct: 1   MIPSLWISKTGLDAQQINMNVISNNLANVSTNGFKRSRAVFEDLMYQTMRQAGTNSSIDT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    + V           G+   T +  D A+ G  +F ++ P   I  TRDG F
Sbjct: 61  TLPSGLQLGTGVRPVSTEKIYSQGNLSKTDSSKDVAINGPGFFQVQLPDGNIAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQI-PQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           ++  +G LV+ SG   + ++   P  I         V    +   +   I  + L +   
Sbjct: 121 QLDQNGQLVTNSGYPIIPEINIPPNSINMNIGRDGIVSVTIQGQTQPISIGQLNLINFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +            D          + +G++E SN N   E+  MI   + +
Sbjct: 181 HSGLESLGENLYQETQASGNPIDTTPGLNGTGLLYQGYVETSNVNVAEELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  I+ +++ + +  +
Sbjct: 241 EINSKSINTSDQMLQKLSQ 259


>gi|239826621|ref|YP_002949245.1| flagellar basal body rod protein FlgG [Geobacillus sp. WCH70]
 gi|239806914|gb|ACS23979.1| protein of unknown function DUF1078 domain protein [Geobacillus sp.
           WCH70]
          Length = 264

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 48/261 (18%), Positives = 94/261 (36%), Gaps = 22/261 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G+ A    + +L  + +N++N +T GF+  +  F ++V               
Sbjct: 1   MLRSMYSGIGAMRNFQTKLDVIGNNIANVNTYGFKKGRTIFKDLVSQQIAGASGPTANRG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRF 106
                Q                GS  +TG  LD A+ GD +F    ++    + TR G F
Sbjct: 61  GVNPKQVGLGSQLAAIDTVHTQGSLQTTGRPLDLAISGDGFFVLGDKNGGNHVYTRAGNF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---V 163
            +  DG++V+A G Y +     +       +      +      +   + + G       
Sbjct: 121 YLDKDGNIVNADGLYLLGIGNKLINIPSSAESFSIGSDGTVNYIENGSLKSAGQIQLAKF 180

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQ 218
           + + G  +  ++              +       T+  G LE SN +   E  +MI   +
Sbjct: 181 NNNDGLEKAGDNLFRQTANSGTATTGAPGANGTGTIVAGTLEMSNVDLAEEFTEMIVAQR 240

Query: 219 KFNSITTLIDENEKSMLEAIR 239
            F + T +I  +++ + E + 
Sbjct: 241 GFQANTRIITTSDEILQELVN 261


>gi|113969608|ref|YP_733401.1| flagellar basal body rod protein FlgG [Shewanella sp. MR-4]
 gi|113884292|gb|ABI38344.1| flagellar basal-body rod protein FlgG [Shewanella sp. MR-4]
          Length = 262

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 40/262 (15%), Positives = 93/262 (35%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  I      A +  ++ +++N++N  TVG++  +  F +++    N          
Sbjct: 1   MHPALWISKTGLDAQQTDIAVISNNVANASTVGYKKSRAVFEDLLYQTVNQAGGISASNT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    +             G+ ++T   LD  +EG  +F ++ P      TR+G+F
Sbjct: 61  KLPNGLNIGAGTKVVATQKMFTQGNMLTTDNSLDLMIEGPGFFEVQLPDGTTAYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE--KGEISQKGKVIATMGLYSVD 164
            + D G +V+    Y +    ++P                K   + + +V+  + +    
Sbjct: 121 TLDDTGQIVTPGSGYVLQPAITIPDDATSITVSAEGEVSVKTPGTAENQVVGQLSMSDFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +  +                    +++G LE SN N   E+  +I   + 
Sbjct: 181 NPSGLDPMGQNLYTETGASGTPIQGTASLDGMGAIRQGALETSNVNVTEELVNLIESQRI 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   ++ +    +N+
Sbjct: 241 YEMNSKVISAVDQMLAYVNQNL 262


>gi|218531221|ref|YP_002422037.1| flagellar basal body rod protein FlgF [Methylobacterium
           chloromethanicum CM4]
 gi|218523524|gb|ACK84109.1| flagellar basal body rod protein [Methylobacterium chloromethanicum
           CM4]
          Length = 246

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 63/247 (25%), Positives = 118/247 (47%), Gaps = 9/247 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN-----DIDQK 55
           MQ +  +G++AQ AL + L  +A+NM+N  T GF+    +F E +  + +       D++
Sbjct: 1   MQNALFVGVSAQTALARELDVIANNMANVSTTGFKARSARFQEYLMPVASADSFQRTDRR 60

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115
           +S+V      L    G        +  AL GDA+ A+++P+G+  TR+G F++   G+LV
Sbjct: 61  LSYVIDQGTPLDLTQGPVEPDSNPMHVALRGDAFLAVQTPQGLRYTRNGAFELDATGNLV 120

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
           ++ G     D    PI I Q++    +   G IS    +   + L +   +Q       +
Sbjct: 121 TSDGHAVQGD--GGPITIGQQETGLAIAPDGTISTNLGIRGRLRLVTFANAQALKSEGAN 178

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
             S   P  P    +   ++ G LE SN   + EM +++ + + ++ ++++I   +    
Sbjct: 179 LFSSEAPARPAGPGAH--LEPGALERSNVKPVVEMTRLMDVNRTYSMVSSVISRLDDLRG 236

Query: 236 EAIRNIA 242
            AIR +A
Sbjct: 237 TAIRRLA 243


>gi|15615012|ref|NP_243315.1| flagellar basal body rod protein FlgG [Bacillus halodurans C-125]
 gi|10175069|dbj|BAB06168.1| flagellar hook protein [Bacillus halodurans C-125]
          Length = 263

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 49/261 (18%), Positives = 100/261 (38%), Gaps = 23/261 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++     + +L  + +N++N +T G++  +  F ++V               
Sbjct: 1   MLRSMYSGISGMRNFQTKLDVIGNNIANVNTFGYKKGRTTFQDMVSQQLAGATAPGANRG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                Q    +           GS  +T  ELD  + GD +F ++       TR G F  
Sbjct: 61  GVNPRQVGLGMQLASIDNVHTQGSLQNTNRELDLGISGDGFFQVQDGDTFYYTRSGNFYF 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG-----KVIATMGLYSV 163
              G++V+A G   ++D    PI +P   + F++G+ G ++        +    + L + 
Sbjct: 121 DQQGTIVNAQG-LRLMDTNGNPITVPTTAQSFSIGQDGTVTYIDEDGDLQEAGMVRLVNF 179

Query: 164 DMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
              +G  +   +    +            +     +  G LE SN +   E  +MI   +
Sbjct: 180 ANPEGLAKAGANLYLVSANSGAPLFTSAGNGGTGDIIAGTLEMSNVDLSEEFTEMIVAQR 239

Query: 219 KFNSITTLIDENEKSMLEAIR 239
            F + T +I  +++ + E + 
Sbjct: 240 GFQANTRIITTSDEILQELVN 260


>gi|148546709|ref|YP_001266811.1| flagellar basal body rod protein FlgG [Pseudomonas putida F1]
 gi|148510767|gb|ABQ77627.1| flagellar basal-body rod protein FlgG [Pseudomonas putida F1]
          Length = 261

 Score =  162 bits (410), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 48/261 (18%), Positives = 96/261 (36%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  +      A +  L+ +++N++N  T GF+  + +F +++  IK           
Sbjct: 1   MLPALWVAKTGLSAQDTNLTVISNNLANVSTTGFKRDRAEFQDLLYQIKRQPGAQSTQDS 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                 Q  + V       + + GS  +T   LD A+ G  +F +  P G +  TRDG F
Sbjct: 61  ELPSGLQVGTGVRIVGTQKNFQTGSLQTTENPLDMAVNGRGFFQILQPDGTVSYTRDGTF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
            +  DG +V+A G      +      Q     +   V      +   +VI  +       
Sbjct: 121 HLNSDGQIVNADGLALEPAIVVPNDAQTFTVGQDGTVSITTAGNPAAQVIGNIQTADFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     N+           +          T  +  LE+SN +++ E+  MI   + +
Sbjct: 181 PAGLQAMGNNLFLETAASGAPQVGTPGLNGFGTTLQQTLENSNVSTVEELVNMITTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
              + +I   ++ +    + +
Sbjct: 241 EMNSKVISTADQMLSFVTQQL 261


>gi|85058013|ref|YP_453715.1| flagellar basal body rod protein FlgG [Sodalis glossinidius str.
           'morsitans']
 gi|84778533|dbj|BAE73310.1| flagellar basal-body rod protein FlgG [Sodalis glossinidius str.
           'morsitans']
          Length = 260

 Score =  162 bits (410), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 84/259 (32%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A +  +  +++N++N  T+GF+  +  F +++               
Sbjct: 1   MMRSLMIAKTGLEAQQTNMDVISNNIANVSTMGFKRQQAVFEDLLYQTVRQPGAKSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           G   +TG   D A+EG  +  +  P G    TRDG  
Sbjct: 61  TIPSGLQLGTGVRPVATTRIHLQGGLTNTGNPTDVAIEGSGFLQVLMPDGTNAYTRDGSL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165
           +    G LV++SG      +               +         + + +  + L +   
Sbjct: 121 QRDQYGQLVTSSGYPIQPAVMIPNGASNLTISKDGLVSVALPGQTEPQEVGQLNLATFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +                       +K+ FLE+SN N   E+  MI   + +
Sbjct: 181 DAGLQSLGENLYYETPSSGAPMENKPGMNGAGALKQQFLENSNVNVAQELITMIQAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  I  +++ +    +
Sbjct: 241 ELNSKAISTSDQMLQRLAQ 259


>gi|42522133|ref|NP_967513.1| flagellar biosynthesisprotein [Bdellovibrio bacteriovorus HD100]
 gi|39574664|emb|CAE78506.1| Flagellar biosynthesisprotein [Bdellovibrio bacteriovorus HD100]
          Length = 271

 Score =  162 bits (410), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 54/266 (20%), Positives = 106/266 (39%), Gaps = 25/266 (9%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK------------ 49
                  L+  +A   +L T+A+N++N +T  F+  +  F E + A +            
Sbjct: 3   IKGVYTALSGAMAQSTKLDTIANNLANVNTPAFKRDQQLFQEYLTANEKMPETTQIPRDV 62

Query: 50  -------NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTR 102
                  N      S+V +   +     G    TG  LD A++G  +F + +P G+ LTR
Sbjct: 63  AAIESFYNMQGGDKSYVDTKGTFTDFSQGGLKPTGNSLDVAIDGKGFFEIATPGGVKLTR 122

Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQI-----PQKDEIFNVGEKGEISQKGKVIAT 157
            G F +   G LV+  G   +    +             +    + + G++ +  + +  
Sbjct: 123 SGNFTLDGSGQLVTKEGYPVLRQGEAGSDPAGRVIRFTGNGAVAIADNGDVYEGTENLGK 182

Query: 158 MGLYSVDMSQGFVRRENSGI-SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
           + L +V+      +  +S           +++++  ++K+GFLE SN N + EM  MI  
Sbjct: 183 LSLVNVNNPDSLQKTGSSLYTFKPNIAPDMQNIANPSLKQGFLETSNVNIVQEMTDMIST 242

Query: 217 TQKFNSITTLIDENEKSMLEAIRNIA 242
            + F S    I   ++   + I  + 
Sbjct: 243 NRVFESTQKAISAYDQMADKMINVVG 268


>gi|33592481|ref|NP_880125.1| flagellar basal body rod protein FlgG [Bordetella pertussis Tohama
           I]
 gi|33572127|emb|CAE41669.1| flagellar basal-body rod protein FlgG [Bordetella pertussis Tohama
           I]
 gi|332381898|gb|AEE66745.1| flagellar basal body rod protein FlgG [Bordetella pertussis CS]
          Length = 261

 Score =  162 bits (410), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 40/260 (15%), Positives = 89/260 (34%), Gaps = 21/260 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  +        +  +  +++N++N  T GF+  +  F +++               
Sbjct: 1   MMRSLWVAKTGLEGQQTSMDVISNNLANVQTNGFKWGRAVFQDLMYQTLRQPGAQVGDAN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q    V           G+  +TG E+D A++G  +  +E P G    TRDG  
Sbjct: 61  QLPSGLQLGMGVQVAATQRVFSQGNMNNTGGEMDIAIQGRGFLQVELPDGTQAYTRDGSL 120

Query: 107 KVTDDGSLVSASGK--YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
           +V  +G L +A G    P +++    + +    +      +   +     I  + + +  
Sbjct: 121 QVDQNGQLTTAGGYVIQPPINVPDNALSLTIGKDGTVSVTQPGAAGTNVQIGQLQVATFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +         P             + + ++E SN N   E+  MI   + 
Sbjct: 181 NPTGLQSVGENLYLETDSSGPANLLQPGIDGAGQILQQYVETSNVNVAEELVNMITTQRA 240

Query: 220 FNSITTLIDENEKSMLEAIR 239
           +   +  +  +++ +    +
Sbjct: 241 YEMNSKAVKTSDEMLARLTQ 260


>gi|257095357|ref|YP_003168998.1| flagellar basal-body rod protein FlgG [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257047881|gb|ACV37069.1| flagellar basal-body rod protein FlgG [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 260

 Score =  162 bits (410), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 89/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S         A + ++  +A+N++N  T GF+  +  F++++               
Sbjct: 1   MIRSLWTASTGLTAQQVQIDIIANNLANVSTNGFKQARGIFADLLYQTLRQPGAQSSQTT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q    V           GS   TG  LD A++G  +F +  P      TRDG F
Sbjct: 61  QIPDGLQIGLGVTPVSTGRIFTQGSLQQTGNALDMAIDGAGFFQVLLPDGTTAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-IATMGLYSVDM 165
           +  + G +V+A+G      +      +        V      +    V I T+ + +   
Sbjct: 121 QKDNQGQIVTANGYPLQPAITIPAQALTVTVATDGVVSITLPTTTAPVQIGTIQVATFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
           + G      +              +  T     V + ++E SN N   E+  MI   + +
Sbjct: 181 NGGLQSVGENLYLETASSGTATPNTPGTNGSGVVVQNYVEASNVNVAQELVLMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
                ++  +++ +    +
Sbjct: 241 ELNAKVVSTSDQMLARLTQ 259


>gi|313682110|ref|YP_004059848.1| flagellar basal-body rod protein flgg [Sulfuricurvum kujiense DSM
           16994]
 gi|313154970|gb|ADR33648.1| flagellar basal-body rod protein FlgG [Sulfuricurvum kujiense DSM
           16994]
          Length = 262

 Score =  162 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 42/257 (16%), Positives = 99/257 (38%), Gaps = 20/257 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S        L+++ ++ T A+N++N +T+G++  + +F++++  +            
Sbjct: 1   MMQSLYTSSTGMLSMQTQIDTTANNIANVNTMGYKKSRAEFADLMYKVMTYAGTSTSDTT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                      V           GS   T   LD A+ G  +F LE P    + +R+G F
Sbjct: 61  KSPTGIEVGLGVRPTSINKIFTEGSLKQTDNSLDLAITGKGFFKLELPNGTEVYSRNGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           K+ ++G++V++ G   V ++                V        +   +  + L S   
Sbjct: 121 KIDENGTIVNSDGYKLVPEVVIPEDATNISIGTDGIVSVTQSGQAQATQVGQISLTSFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++            + +        +++GF+E SN   + E+  +I   + +
Sbjct: 181 PAGLHAMGDNLFVETDSSGQPIEGTPGENGIGNIRQGFVELSNVQLVVELTDLITGQRAY 240

Query: 221 NSITTLIDENEKSMLEA 237
           ++ + +I  +++ +   
Sbjct: 241 DANSKVITTSDEMLATT 257


>gi|238028847|ref|YP_002913078.1| flagellar basal body rod protein FlgG [Burkholderia glumae BGR1]
 gi|237878041|gb|ACR30374.1| Flagellar basal-body rod protein [Burkholderia glumae BGR1]
          Length = 262

 Score =  162 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 89/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A + ++  +++N++N  T GF+  +  F +++               
Sbjct: 1   MNRSLYIAATGMNAQQAQMDVISNNLANVSTNGFKGSRAVFEDLLYQTVRQPGANSTQQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+   TG   D A+ G  +F +  P      TRDG F
Sbjct: 61  ELPSGLQLGTGVQQVATERLYTQGNLQQTGNSRDVAINGQGFFQVLMPDGTTAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           +  + G LV+++G   +  +                V      S     I +M L +   
Sbjct: 121 QANNQGQLVTSAGYQVLPAITVPQNAQSLTIGADGVVTVTQPGSTNAVQIGSMQLATFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
            +G      +  +                   ++ +G++E SN N + E+  MI   + +
Sbjct: 181 PEGLNALGQNLFAETTSSGAPNVTTPGLNGAGSLNQGYVESSNVNVVQELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ +    +
Sbjct: 241 EINSKAVTTSDQMLQTVTQ 259


>gi|163802601|ref|ZP_02196493.1| polar flagellar FlgG [Vibrio sp. AND4]
 gi|159173684|gb|EDP58503.1| polar flagellar FlgG [Vibrio sp. AND4]
          Length = 262

 Score =  162 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 47/262 (17%), Positives = 94/262 (35%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +  +      A +  ++T+++N++N  TVGF+  +  F ++     N    +     
Sbjct: 1   MHPALWVSKTGLDAQQTNIATISNNLANASTVGFKKSRAVFEDLFYQNINQPGGQSSQNT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    +             G+  +T   LD  +EGD +F +  P   I  TR+G+F
Sbjct: 61  ELPSGLMLGAGSKVVATQKVHTHGNAQTTTNALDMMVEGDGFFQVTLPDGNIGYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD--EIFNVGEKGEISQKGKVIATMGLYSVD 164
            +  +G+LV++   Y V     +P             V  +    Q   V+  + +    
Sbjct: 121 TLDGEGTLVTSGSGYAVEPEIVIPEDAISITVGTDGEVSVRVRGEQNNVVVGQLTITDFV 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +   P       ++          +++  LE SN N   E+  MI   + 
Sbjct: 181 NPGGLEPIGQNLYLPTGASGDPQEGVPGLDGLGEIRQSMLEASNVNVTEELVNMIEAQRV 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   +K M    + +
Sbjct: 241 YEMNSKVISSVDKMMSFINQQL 262


>gi|89069818|ref|ZP_01157153.1| flagellar basal-body rod protein FlgG [Oceanicola granulosus
           HTCC2516]
 gi|89044619|gb|EAR50735.1| flagellar basal-body rod protein FlgG [Oceanicola granulosus
           HTCC2516]
          Length = 261

 Score =  162 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 96/259 (37%), Gaps = 21/259 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             +  I      A + R+  +++N++N +T G+   + +F+++                 
Sbjct: 1   MRALKIAATGMSAQQMRVEVISNNLANMNTTGYNARRAEFADLHYQQMMRPGTINASDGT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q    V      +    GS  STG +LD A+EG  +  +  P      TRDG  
Sbjct: 61  VLPTGVQLGLGVRPTSVSMMLAQGSLSSTGGDLDIAIEGSGYLEVALPDGRPGYTRDGGL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           K + DG +V+A G     ++      +         V        + +++    +     
Sbjct: 121 KRSGDGLIVTADGFPVAPEITIPRDALSISINPEGEVYAYFSDRVEAQLLGQFDIAGFSN 180

Query: 166 SQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
            +G     ++         P            T+++GFLEDS+ +++ E+  +I   + +
Sbjct: 181 PRGLEAVGSNLFVETEASGPANVTTPGQDGLGTLRQGFLEDSSVDAVKEVTDLIEAQRGY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              + +I   ++ +   ++
Sbjct: 241 ELNSKVISAADQMLGATVQ 259


>gi|329888226|ref|ZP_08266824.1| flagellar basal-body rod protein FlgG [Brevundimonas diminuta ATCC
           11568]
 gi|328846782|gb|EGF96344.1| flagellar basal-body rod protein FlgG [Brevundimonas diminuta ATCC
           11568]
          Length = 262

 Score =  162 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 46/254 (18%), Positives = 95/254 (37%), Gaps = 21/254 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             +         A +  +  +++N++N +TVGF+  + +F +++      +         
Sbjct: 1   MRALRTAATGMAAQQLNVEVISNNIANMNTVGFKRQRAEFQDLLYQNVERMGAQSSSQGT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  S V +G  Y   E GS   TG   D A++G  +F +  P G    TR G F
Sbjct: 61  VVPTGIQIGSGVKAGSVYRITEQGSPNRTGNTYDIAIQGKGYFQITLPSGELAYTRAGNF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
            V  +G LV+  G      +A     +     +   V        + +V+  + L +   
Sbjct: 121 TVNGEGQLVTDDGYAVEPAIAIPQDALDVSISKSGQVQVTTAGQTEPQVVGQLELATFFN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVTV-----KRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++ +       P    +   V      + + E SN +++ E+  +I   + +
Sbjct: 181 EAGLEAIGDNLLLETAASGPATVGAPGEVGYGNLLQHYTEASNVDAVSEITALIVAQRAY 240

Query: 221 NSITTLIDENEKSM 234
              + +I   ++ +
Sbjct: 241 EMNSKVITTADEML 254


>gi|291617022|ref|YP_003519764.1| FlgG [Pantoea ananatis LMG 20103]
 gi|291152052|gb|ADD76636.1| FlgG [Pantoea ananatis LMG 20103]
 gi|327393473|dbj|BAK10895.1| flagellar basal-body rod protein FlgG [Pantoea ananatis AJ13355]
          Length = 260

 Score =  162 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 87/259 (33%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S  I      A +  +  +A+N++N  T GF+  +  F +++         +     
Sbjct: 1   MIRSLWIAKTGLDAQQMNMDVIANNLANVSTNGFKRSRAVFEDLMYQTMRQPGTQSSEQT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                    + V           G+   T    D A+ G  +F ++ P G    TRDG F
Sbjct: 61  TLPSGLQIGTGVRPVTTERLHTQGNLSQTNNSKDIAINGQGFFQIQMPDGTSAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V  +G LV+ SG      +                V    +   +   +  + L +   
Sbjct: 121 QVDQNGQLVTNSGFPVQPGITIPANATSITVSRDGVVSVTQQGQTQAAQVGQLTLSTFMN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
           + G      +            D +        + +G+ E SN N   E+  MI   + +
Sbjct: 181 NAGLDSVGENLYKETQASGAPTDSTPGQNGAGLLYQGYAETSNVNVAEELVTMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  I  +++ + +  +
Sbjct: 241 EINSKAISTSDQMLAKLTQ 259


>gi|158422258|ref|YP_001523550.1| flagellar basal body rod protein FlgG [Azorhizobium caulinodans ORS
           571]
 gi|158329147|dbj|BAF86632.1| flagellar basal-body rod FlgG protein [Azorhizobium caulinodans ORS
           571]
          Length = 262

 Score =  162 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 42/253 (16%), Positives = 90/253 (35%), Gaps = 21/253 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----------- 50
             +  I      A +  +  +A+N++N +T GF+  + +FS+++   +            
Sbjct: 1   MRALAIAATGMNAQQTNVEVIANNIANINTTGFKRARAEFSDLLYQSERTQGIPNRDGGQ 60

Query: 51  ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
              +       V +         G    TG  LD A+ G   F + +P    + TR G F
Sbjct: 61  AIPEGAMLGLGVRTVGIRNLHTQGPLTQTGNTLDLAVNGRGMFEITTPDGQTVYTRAGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIP-QKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
             +  G LV++ G      +         Q +E   V          +++  + L +   
Sbjct: 121 NRSATGQLVTSDGYVINPAIQFPNNATEIQVNESGQVYATIPNQTNPQLLGQLTLVNFAN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     N+     +                 +++G+LE SN + + E+ ++I   + +
Sbjct: 181 ESGMEPLGNNLYRETLASGQPIVGVAGDVGFGKIQQGYLEASNVDPVKEITELIAAQRSY 240

Query: 221 NSITTLIDENEKS 233
              + +I   ++ 
Sbjct: 241 EMNSKVIQAADEM 253


>gi|315648129|ref|ZP_07901230.1| fagellar hook-basal body protein [Paenibacillus vortex V453]
 gi|315276775|gb|EFU40118.1| fagellar hook-basal body protein [Paenibacillus vortex V453]
          Length = 274

 Score =  162 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 58/272 (21%), Positives = 109/272 (40%), Gaps = 34/272 (12%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++     + +L  + +N++N +TVGF+  +V F +++    + +        
Sbjct: 1   MLRSMYSGISGMRGFQTKLDVIGNNIANVNTVGFKAGRVMFKDILSQTMSGVTPGTDDPS 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI---ILTRDG 104
                 Q    V+ G        GS ++T    D  ++GD +F ++         LTR G
Sbjct: 61  GGVNAKQIGLGVSIGSIDTMHTPGSAMTTHNPTDLRIDGDGFFMVKLSEDQEVPFLTRAG 120

Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQK-----GKVIATMG 159
            F V    +LV++ G   VLD A  PIQ+      F + + G I QK      +  A +G
Sbjct: 121 DFHVDVARNLVTSDG-MLVLDSAGDPIQLGDDVTAFTIAQNGAIIQKLSDGTTEAGAIIG 179

Query: 160 LYSVDMSQGFVRRENSGISPNIPPTP------------LEDLSGVTVKRGFLEDSNANSM 207
           +  +   +G  +   +     +   P              +     +  G LE SN +  
Sbjct: 180 VAKIPNPEGLEKIGGNMYRVTLNAVPDGDVAAVMFEGNDAEEGTGAIIAGQLEMSNVDLT 239

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            E  +MI   + F + + +I  +++ + E + 
Sbjct: 240 SEFSEMIVAQRGFQANSRIITTSDEVLQEVVN 271


>gi|28897555|ref|NP_797160.1| flagellar basal body rod protein FlgG [Vibrio parahaemolyticus RIMD
           2210633]
 gi|91225875|ref|ZP_01260844.1| polar flagellar FlgG [Vibrio alginolyticus 12G01]
 gi|153839683|ref|ZP_01992350.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
           AQ3810]
 gi|254230138|ref|ZP_04923533.1| flagellar basal-body rod protein FlgG [Vibrio sp. Ex25]
 gi|260364613|ref|ZP_05777215.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
           K5030]
 gi|260878282|ref|ZP_05890637.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
           AN-5034]
 gi|260898112|ref|ZP_05906608.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
           Peru-466]
 gi|260901956|ref|ZP_05910351.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
           AQ4037]
 gi|262394937|ref|YP_003286791.1| flagellar basal-body rod protein FlgG [Vibrio sp. Ex25]
 gi|269965422|ref|ZP_06179541.1| flagellar basal-body rod protein FlgG [Vibrio alginolyticus 40B]
 gi|5361010|gb|AAD42917.1|U12817_11 polar flagellar FlgG homolog [Vibrio parahaemolyticus]
 gi|28805767|dbj|BAC59044.1| polar flagellar FlgG [Vibrio parahaemolyticus RIMD 2210633]
 gi|91189525|gb|EAS75801.1| polar flagellar FlgG [Vibrio alginolyticus 12G01]
 gi|149746793|gb|EDM57781.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
           AQ3810]
 gi|151937331|gb|EDN56194.1| flagellar basal-body rod protein FlgG [Vibrio sp. Ex25]
 gi|262338531|gb|ACY52326.1| flagellar basal-body rod protein FlgG [Vibrio sp. Ex25]
 gi|269829901|gb|EEZ84131.1| flagellar basal-body rod protein FlgG [Vibrio alginolyticus 40B]
 gi|308086113|gb|EFO35808.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
           Peru-466]
 gi|308090170|gb|EFO39865.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
           AN-5034]
 gi|308106768|gb|EFO44308.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
           AQ4037]
 gi|308115105|gb|EFO52645.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus
           K5030]
 gi|328473451|gb|EGF44299.1| flagellar basal body rod protein FlgG [Vibrio parahaemolyticus
           10329]
          Length = 262

 Score =  162 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 47/262 (17%), Positives = 96/262 (36%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +  +      A +  ++T+++N++N  TVG++  +  F ++     N    +     
Sbjct: 1   MHPALWVSKTGLDAQQTNIATISNNLANASTVGYKKSRAVFEDLFYQNINQPGGQSSQNT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    +             G+  +T   LD  +EGD +F +  P   I  TR+G+F
Sbjct: 61  ELPSGLMLGAGSKVVATQKVHTHGNAQTTTNALDMMVEGDGFFQVTLPDGNIGYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD--EIFNVGEKGEISQKGKVIATMGLYSVD 164
            +  +G+LV++   YPV     +P             V  +    Q  +V+  + +    
Sbjct: 121 TLNGEGTLVTSGSGYPVEPEIVIPEDAISITVGTDGEVSVRVRGQQDNQVVGQLTITDFV 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +   P       ++          +++  LE SN N   E+  MI   + 
Sbjct: 181 NPGGLEPIGQNLYLPTGASGDPQEGVPGLDGLGEIRQSMLEASNVNVTEELVNMIEAQRV 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   +K M    + +
Sbjct: 241 YEMNSKVISSVDKMMSFVNQQL 262


>gi|114046840|ref|YP_737390.1| flagellar basal body rod protein FlgG [Shewanella sp. MR-7]
 gi|113888282|gb|ABI42333.1| flagellar basal-body rod protein FlgG [Shewanella sp. MR-7]
          Length = 262

 Score =  162 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 40/262 (15%), Positives = 93/262 (35%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  I      A +  ++ +++N++N  TVG++  +  F +++    N          
Sbjct: 1   MHPALWISKTGLDAQQTDIAVISNNVANASTVGYKKSRAVFEDLLYQTVNQAGGISASNT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    +             G+ ++T   LD  +EG  +F ++ P      TR+G+F
Sbjct: 61  KLPNGLNIGAGTKVVATQKMFTQGNMLTTDNSLDLMIEGPGFFEVQLPDGTTAYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE--KGEISQKGKVIATMGLYSVD 164
            + D G +V+    Y +    ++P                K   + + +V+  + +    
Sbjct: 121 TLDDTGQIVTPGSGYVLQPAITIPEDATSITVSAEGEVSVKTPGAAENQVVGQLSMSDFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +  +                    +++G LE SN N   E+  +I   + 
Sbjct: 181 NPSGLDPMGQNLYTETGASGTPIQGTASLDGMGAIRQGALETSNVNVTEELVNLIESQRI 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   ++ +    +N+
Sbjct: 241 YEMNSKVISAVDQMLAYVNQNL 262


>gi|117919774|ref|YP_868966.1| flagellar basal body rod protein FlgG [Shewanella sp. ANA-3]
 gi|117612106|gb|ABK47560.1| flagellar basal-body rod protein FlgG [Shewanella sp. ANA-3]
          Length = 262

 Score =  162 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 40/262 (15%), Positives = 93/262 (35%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  I      A +  ++ +++N++N  TVG++  +  F +++    N          
Sbjct: 1   MHPALWISKTGLDAQQTDIAVISNNVANASTVGYKKSRAVFEDLLYQTVNQAGGISASNT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    +             G+ ++T   LD  +EG  +F ++ P      TR+G+F
Sbjct: 61  KLPNGLNIGAGTKVVATQKMFTQGNMLTTDNSLDLMIEGPGFFEVQLPDGTTAYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE--KGEISQKGKVIATMGLYSVD 164
            + D G +V+    Y +    ++P                K   + + +V+  + +    
Sbjct: 121 TLDDTGQIVTPGSGYVLQPAITIPEDATSITVSAEGEVSVKTPGAAENQVVGQLSMTDFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +  +                    +++G LE SN N   E+  +I   + 
Sbjct: 181 NPSGLDPMGQNLYTETGASGTPIQGTASLDGMGAIRQGALETSNVNVTEELVNLIESQRI 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   ++ +    +N+
Sbjct: 241 YEMNSKVISAVDQMLAYVNQNL 262


>gi|258621051|ref|ZP_05716085.1| flagellar basal-body rod protein FlgG [Vibrio mimicus VM573]
 gi|258625279|ref|ZP_05720187.1| flagellar basal-body rod protein FlgG [Vibrio mimicus VM603]
 gi|262166280|ref|ZP_06034017.1| flagellar basal-body rod protein FlgG [Vibrio mimicus VM223]
 gi|262170827|ref|ZP_06038505.1| flagellar basal-body rod protein FlgG [Vibrio mimicus MB-451]
 gi|258582452|gb|EEW07293.1| flagellar basal-body rod protein FlgG [Vibrio mimicus VM603]
 gi|258586439|gb|EEW11154.1| flagellar basal-body rod protein FlgG [Vibrio mimicus VM573]
 gi|261891903|gb|EEY37889.1| flagellar basal-body rod protein FlgG [Vibrio mimicus MB-451]
 gi|262025996|gb|EEY44664.1| flagellar basal-body rod protein FlgG [Vibrio mimicus VM223]
          Length = 262

 Score =  162 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 47/262 (17%), Positives = 96/262 (36%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           MQ +  +      A +  ++T+++N++N  TVGF+  +  F ++     N    +     
Sbjct: 1   MQPALWVSKTGLDAQQTNIATISNNLANASTVGFKKGRAVFEDLFYQNINQPGAQSSQNT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    +             G+  +T   LD  +EGD +F +  P   I  +R+G+F
Sbjct: 61  RLPSGLMLGAGSKVVATQKVHTHGNAQTTSNSLDMMIEGDGFFQILMPDGNIAYSRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD--EIFNVGEKGEISQKGKVIATMGLYSVD 164
            + D+G++V++   Y +     +P             V  +    Q  +V+  +      
Sbjct: 121 TLDDEGAIVTSGSGYRLQPEIVIPEDAISITIGNDGEVSVRVRGQQDNQVLGQITTVDFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +   P       ++          V++  LE SN N   E+  MI   + 
Sbjct: 181 NPGGLEPIGQNLYLPTGASGEPQEGVPGLDGLGDVRQSMLETSNVNVTEELVNMIEAQRV 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   +K M    + +
Sbjct: 241 YEMNSKVISAVDKMMSFVNQQL 262


>gi|260768780|ref|ZP_05877714.1| flagellar basal-body rod protein FlgG [Vibrio furnissii CIP 102972]
 gi|260616810|gb|EEX41995.1| flagellar basal-body rod protein FlgG [Vibrio furnissii CIP 102972]
 gi|315180483|gb|ADT87397.1| hypothetical flagellar basal-body rod protein [Vibrio furnissii
           NCTC 11218]
          Length = 261

 Score =  162 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 46/260 (17%), Positives = 100/260 (38%), Gaps = 20/260 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  I      A + +++ +++N++N +TVGF+  +V F ++  +++           
Sbjct: 1   MHNALMISKTGMAAQDAKMTAISNNLANVNTVGFKRDRVVFEDLFYSVEKQAGTGTNDLN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                 Q  + V           G+  +T  + D A+ GD +F +E P G +  TR+G+F
Sbjct: 61  IHPTGVQLGNGVRVAGTEKVFTQGNINNTSQQFDLAIVGDGFFQIEGPEGEVLYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
            +  DG++V+  G     ++       +    E   V        + + +  + L     
Sbjct: 121 HLNADGAIVNTQGYLLQPEINVPDNATLVTITEDGQVSAVVSGQVEPEQLGEITLVKFMN 180

Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   +  + ++         +          +K+G LE SN   + EM  MI   + +
Sbjct: 181 PSGLTAKGANLLAETEASGEAMELVAGTDGAGVIKQGALETSNVQVVEEMVDMISTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRN 240
                ++   ++ +     N
Sbjct: 241 EMSAKMVSAADQMLQYIANN 260


>gi|1086561|gb|AAB68968.1| FlgG [Agrobacterium tumefaciens]
 gi|2459714|gb|AAB71790.1| FlgG [Agrobacterium tumefaciens]
          Length = 262

 Score =  162 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 44/261 (16%), Positives = 93/261 (35%), Gaps = 21/261 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----------- 50
             +  I      A +  L  +A+N++N +T G++  + +F++++   +            
Sbjct: 1   MRALAIAATGMDAQQTNLEVIANNIANINTTGYKRARAEFTDLLYQTERMQGVPNRANQA 60

Query: 51  ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRF 106
              +       V +         G+ I TG +LD A+ G  WF     R    L R G F
Sbjct: 61  IVPEGANIGLGVQTSAVRNIHTQGNLIETGNKLDVAIIGQGWFPDRGRRWFDALQRAGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
               DG+LV+  G   + ++                V  +   +     +  + + +   
Sbjct: 121 NKNADGNLVTVDGYNVIPNINIPTDAQDITITRTGQVTARIGNAADFTQLGQLTIANFAN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++  S                S   VK+ +LE SN +++ E+  +I   + +
Sbjct: 181 EAGLKPLGDNLFSQTPASGAPVVGVPDDPSYGYVKQSYLEGSNVDAVKEITDLITAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
              + +I   ++      +N+
Sbjct: 241 EMNSKVITTADEMASIVSKNL 261


>gi|218887603|ref|YP_002436924.1| hypothetical protein DvMF_2517 [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218758557|gb|ACL09456.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           vulgaris str. 'Miyazaki F']
          Length = 259

 Score =  162 bits (409), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 55/259 (21%), Positives = 103/259 (39%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-------- 52
           MQ      L   L  E R++ +++N++N +T G++   + F + +    +D         
Sbjct: 1   MQEGMLSSLFGALTNEHRMNNISNNLANVNTTGYKRDVISFKDTMQLFAHDQIMEPIANV 60

Query: 53  --------DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDG 104
                      ++       +   E GS   TG  LD A+ G+A+F + +P G   TR+G
Sbjct: 61  RSKKLFPEPMHVARPRIAVAHTDFEQGSMRYTGNPLDVAISGNAFFKVRTPEGEFYTRNG 120

Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
            F  T DG LV+A G     D   + +      E   + + G+I   G ++  + + +V+
Sbjct: 121 NFIQTADGQLVTAMGHAVQGDGGDIAL---PPGEAVQISDDGQIFAGGALVGQLNMVTVN 177

Query: 165 MSQGFVRRENSGIS-PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223
                 +   +                   V +G+LE SN   + EM  MI   ++F + 
Sbjct: 178 DLTALEKLGGNMYRLRPGSNAGEVPAERAYVAQGYLEASNVEVVSEMVNMIEAQRQFEAY 237

Query: 224 TTLIDENEKSMLEAIRNIA 242
             ++   +    EA + + 
Sbjct: 238 QKVMQTTDSIDREATQKVG 256


>gi|222530299|ref|YP_002574181.1| flagellar basal body rod protein [Caldicellulosiruptor bescii DSM
           6725]
 gi|222457146|gb|ACM61408.1| flagellar basal body rod protein [Caldicellulosiruptor bescii DSM
           6725]
          Length = 255

 Score =  162 bits (409), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 51/258 (19%), Positives = 102/258 (39%), Gaps = 21/258 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS-----------EVVGAIK 49
           M        +  +  ++ +   A+N++N  T GF+    +             + V +  
Sbjct: 1   MIRGIYTSASGMILNQKLMDITANNVANVSTTGFKRDVAQVESFRNMLVYRIYDKVSSPD 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP-----RGIILTRDG 104
           N I          +       G +I T   L+ A++GD +F +E P     + I  TR+G
Sbjct: 61  NAIGYMSLGADVSRIVSDFSQGLYIKTDEPLNLAIKGDGFFTIEVPENQGAQQIFYTRNG 120

Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
            F +   G LV+ +G Y +         + Q      + E+G + Q G+++  + +    
Sbjct: 121 AFTLNSRGELVTLNGFYVLG---QNGRIVLQNGGQVRIDEQGNVYQNGRIVDRLRVVDFQ 177

Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224
                 +  N+    +     +       V +G+LE SN NS+ EM  MI + + + +  
Sbjct: 178 DKSLLRKVGNNLFEADAAVQQIPFS--GKVLQGYLEGSNVNSVQEMVNMISVLRAYEANQ 235

Query: 225 TLIDENEKSMLEAIRNIA 242
                 ++++ +A+  IA
Sbjct: 236 KAFVIQDETLQKAVNEIA 253


>gi|292487941|ref|YP_003530816.1| flagellar basal-body rod protein FlgG [Erwinia amylovora CFBP1430]
 gi|292899160|ref|YP_003538529.1| flagellar basal-body rod protein FlgG [Erwinia amylovora ATCC
           49946]
 gi|291199008|emb|CBJ46119.1| flagellar basal-body rod protein FlgG (distal rod protein) [Erwinia
           amylovora ATCC 49946]
 gi|291553363|emb|CBA20408.1| Flagellar basal-body rod protein flgG [Erwinia amylovora CFBP1430]
 gi|312172062|emb|CBX80319.1| Flagellar basal-body rod protein flgG [Erwinia amylovora ATCC
           BAA-2158]
          Length = 260

 Score =  162 bits (409), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 41/259 (15%), Positives = 87/259 (33%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A +  +  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLMYQTMRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  +             G+   T +  D A+ G  +F+++ P      TRDG F
Sbjct: 61  TLPSGLQIGTGTRPVATERLHNQGNLSQTDSSKDVAINGQGFFSVQMPDGTTAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQI-PQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +   +G LV+ +G      +      +         V    +       +  + L +   
Sbjct: 121 QTDQNGQLVTNAGFPVQPAIVIPANSLSMTVSRDGVVSVTQQGQANPVQVGQLTLSTFMN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +            + +       T+ +G++E SN N   E+  MI   + +
Sbjct: 181 DAGLSSMGENLYQETQASGVPNESNPGNNGAGTLYQGYVETSNVNVAEELVSMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  I  +++ + +  +
Sbjct: 241 EINSKAISTSDQMLAKLTQ 259


>gi|116626490|ref|YP_828646.1| flagellar basal-body rod protein FlgG [Candidatus Solibacter
           usitatus Ellin6076]
 gi|116229652|gb|ABJ88361.1| flagellar basal-body rod protein FlgG [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 263

 Score =  162 bits (409), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 41/262 (15%), Positives = 87/262 (33%), Gaps = 22/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +     +   A +  +  +A N++N +T G++  + +F +++               
Sbjct: 1   MIRALYSAASGMTAQQLNVDNIAHNLANANTAGYKMRRAQFQDLIYQTVVQPGSASGQQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q      +    +    GSF  T   LD  ++G  +F +  P G    TR G F
Sbjct: 61  TVPTGLQVGLGTRTSSNEILFTQGSFAQTDNPLDLVIQGKGFFQVRQPSGQLAYTRSGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
               DG++V+  G      +            +   V          +    + L +   
Sbjct: 121 HCDRDGNIVTQDGNTLEPQITVPAAAQQISIAQDGTVSYTLPNQSAAQQAGQIQLANFQN 180

Query: 166 SQGFVRRENSGISPNIP------PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
             G      +   P          TP       +V +G+ E SN + + E   +I   + 
Sbjct: 181 PAGLNSVGGNLYLPTDASGDATVGTPGGQEGLGSVLQGYTEQSNVSVVEEFINLIVAQRG 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           + + + ++   +    + + N+
Sbjct: 241 YEANSKVVKAADDMYQQ-VNNL 261


>gi|157961173|ref|YP_001501207.1| flagellar basal body rod protein FlgG [Shewanella pealeana ATCC
           700345]
 gi|157846173|gb|ABV86672.1| flagellar basal-body rod protein FlgG [Shewanella pealeana ATCC
           700345]
          Length = 262

 Score =  162 bits (409), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 44/262 (16%), Positives = 91/262 (34%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  I      A +  +S +++N++N  TVGF+  +  F +++    N          
Sbjct: 1   MHPALWISKTGLDAQQTDISVISNNVANASTVGFKKSRAVFEDLLYQNVNQAGGISASNT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                    S             G+ ++T   LD  +EG  +F ++ P G    TR+G+F
Sbjct: 61  KLPNGLSIGSGTKVVATQEIFTQGNMLTTDNSLDLLVEGPGFFEVQLPDGTAAYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQK--GKVIATMGLYSVD 164
            + D G +V+    Y V    ++P                +       +V+  + +    
Sbjct: 121 SLDDTGQIVTPGSGYVVQPAITIPEDATSITVSAEGEVSVKTPGNAENQVVGQLAISDFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +                       +++G LE SN N   E+  +I   + 
Sbjct: 181 NPSGLDPMGQNLYMETGASGTPIQGTASLDGMGAIRQGALETSNVNVTEELVNLIESQRI 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   ++ +    +N+
Sbjct: 241 YEMNSKVISAVDQMLSYVNQNL 262


>gi|238752865|ref|ZP_04614330.1| Lateral flagellar rod protein (FlgG-like) [Yersinia rohdei ATCC
           43380]
 gi|238708904|gb|EEQ01157.1| Lateral flagellar rod protein (FlgG-like) [Yersinia rohdei ATCC
           43380]
          Length = 261

 Score =  162 bits (409), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 43/261 (16%), Positives = 89/261 (34%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +  +      A + +++ +++N++N +T GF+  +V F ++    +           
Sbjct: 1   MNPALWVSKTGLAAQDAKMNAISNNLANVNTDGFKRDRVVFEDLFYQNQRTPGTPLDQNN 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106
                    S V          VG+   T  ELD A+ G  +F +E+   G+  TR G  
Sbjct: 61  ATPNGIQLGSGVKVVGTQKQFTVGNIKVTKGELDVAIAGKGFFQIETSDGGLAYTRAGNL 120

Query: 107 KVTDDGSLVSASGKY-PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
            +  DG LV+A G                   +   V  +     +   +  + L     
Sbjct: 121 AINADGVLVNAQGMPLIPQIELPAGSSNLAIGKDGTVTAQVGGESEPAELGQITLVDFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +     +      +      +   ++ G LE SN   + EM  MI + + +
Sbjct: 181 PAGLEAVGGNMYKETVASGTAVEGVPGEEAFGQLEHGSLEGSNVQVVEEMVDMITVQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
                ++   +  +    + +
Sbjct: 241 EMNAKMVSAADDMLKFVTQKL 261


>gi|167628970|ref|YP_001679469.1| flagellar basal-body rod protein, putative [Heliobacterium
           modesticaldum Ice1]
 gi|167591710|gb|ABZ83458.1| flagellar basal-body rod protein, putative [Heliobacterium
           modesticaldum Ice1]
          Length = 267

 Score =  161 bits (408), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 43/265 (16%), Positives = 88/265 (33%), Gaps = 23/265 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS---EVVGAIKND------ 51
           M        +  L  +      A+N++N +TV F+  +  F    E++    +D      
Sbjct: 1   MIRGLYTSASGMLVQQTNQDVTANNLANVNTVSFKKDRAVFRGFPEMLIRRMHDFSPAEP 60

Query: 52  --------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTR 102
                   I +  +       +          T    D A+ G  +F +  P      TR
Sbjct: 61  GQAEKNPLIGRIGTGAVVDAIWTDPTSAGLRVTQNPTDLAIIGRGYFVVMGPDGEERYTR 120

Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162
           +G+F +  DG+LV+  G        ++ I       I + G       +   +  +G   
Sbjct: 121 NGQFSLRADGTLVTTEGFAVQGTAGAIRIPQGGNLRIDSDGRIFSGDTEVAQLRIVGYDE 180

Query: 163 VDMSQGFVRRENSGISP-----NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217
                  + +    +       +        +    ++ G LE +N N + EM QMI   
Sbjct: 181 TPGQAPPLVKAGDSLYRLNEQGDGGGVRDLAIGEREIRSGALELANVNVVQEMVQMISAA 240

Query: 218 QKFNSITTLIDENEKSMLEAIRNIA 242
           + + +    I   + ++ +A   + 
Sbjct: 241 RAYEANQKAIQSQDGTLEKACTELG 265


>gi|302874613|ref|YP_003843246.1| fagellar hook-basal body protein [Clostridium cellulovorans 743B]
 gi|307690776|ref|ZP_07633222.1| flagellar basal body rod protein FlgG [Clostridium cellulovorans
           743B]
 gi|302577470|gb|ADL51482.1| fagellar hook-basal body protein [Clostridium cellulovorans 743B]
          Length = 254

 Score =  161 bits (408), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 51/256 (19%), Positives = 113/256 (44%), Gaps = 17/256 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVV----------GA 47
           M  +    L+  ++ E R++++++N++N +TVG+++  +    F +V+            
Sbjct: 1   MIRALYTSLSGMISKEARMNSISNNLANANTVGYKSDDLILKSFDQVLLENRGKKNGEAH 60

Query: 48  IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107
           ++N++      V   + Y     G+  ST ++ D A+ GD +F +E       TRDG F 
Sbjct: 61  VRNELGGLSLGVELDETYTDYNQGTLESTDSQTDLAILGDGFFTVERNGNKFYTRDGNFS 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           V   G +V++ G Y + +  +       K ++ + G     +   KV   + +       
Sbjct: 121 VDPQGYMVNSKGDYLLGNNGNRIYVANGKIDVKDNGVLTVDNGNTKVAYNLDVVDFADKN 180

Query: 168 GFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
             VR  ++              +   VK+  LE SN N +  M +M+ + ++F +   +I
Sbjct: 181 TLVRNGDNLY----SGGNPTAATKFNVKQRALEKSNVNVVNGMIEMMSVYREFETNQKVI 236

Query: 228 DENEKSMLEAIRNIAS 243
              ++++ +++  + S
Sbjct: 237 QTLDETLGKSVNQLGS 252


>gi|260767767|ref|ZP_05876702.1| flagellar basal-body rod protein FlgG [Vibrio furnissii CIP 102972]
 gi|260617276|gb|EEX42460.1| flagellar basal-body rod protein FlgG [Vibrio furnissii CIP 102972]
 gi|315179401|gb|ADT86315.1| flagellar basal body rod protein FlgG [Vibrio furnissii NCTC 11218]
          Length = 262

 Score =  161 bits (408), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 48/262 (18%), Positives = 96/262 (36%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           MQ +  +      A +  ++T+++N++N  TVGF+  +  F ++     N    +     
Sbjct: 1   MQPALWVSKTGLDAQQTNIATISNNLANASTVGFKKSRAVFEDLFYQNINQPGGQSSQNT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    +             G+  +T   LD  +EGD +F +  P   I  +R+G+F
Sbjct: 61  ELPSGLMLGAGSKVVATQKVHTHGNAQTTTNSLDMMIEGDGFFQILMPDGNIGYSRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD--EIFNVGEKGEISQKGKVIATMGLYSVD 164
            + D+G +V++   YP+     +P             V  +    Q  +V+  +      
Sbjct: 121 TLNDEGVIVTSGSGYPLQPEIVIPDDAISITVGNDGEVSVRVRGQQDNQVLGQITTVDFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +   P       ++          V++  LE SN N   E+  MI   + 
Sbjct: 181 NPGGLEPIGQNLYLPTGASGDPQEGVPGLDGLGNVRQSMLESSNVNVTEELVNMIEAQRV 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   +K M    + +
Sbjct: 241 YEMNSKVISAVDKMMSFVNQQL 262


>gi|78067835|ref|YP_370604.1| flagellar basal body rod protein FlgG [Burkholderia sp. 383]
 gi|77968580|gb|ABB09960.1| conserved hypothetical protein [Burkholderia sp. 383]
          Length = 262

 Score =  161 bits (408), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 89/259 (34%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A + ++  +++N++NT T GF+  +  F +++               
Sbjct: 1   MNRSLYIAATGMNAQQAQMDVISNNLANTSTNGFKASRAVFEDLLYQTIRQPGANSTQQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           G    TG   D A+ G  +F +  P G    TRDG F
Sbjct: 61  ELPSGLQLGTGVQQVATERLYTQGGLTQTGNSKDVAINGAGFFQVLMPDGTNAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +    G LV++SG   +  +            +   V      S     I ++ + +   
Sbjct: 121 QTNAQGQLVTSSGYQVLPAITIPQNATSLTIGKDGVVTVTQAGSTNSVQIGSLQVATFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   R  +  S                   T+ + ++E SN N + E+  MI   + +
Sbjct: 181 PAGLEARGENLFSETTSSGAPNVSQPGLNGAGTLSQNYVESSNVNVVQELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ +    +
Sbjct: 241 EINSKAVTTSDQMLQTVTQ 259


>gi|300024606|ref|YP_003757217.1| flagellar basal-body rod protein FlgG [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299526427|gb|ADJ24896.1| flagellar basal-body rod protein FlgG [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 262

 Score =  161 bits (408), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 41/261 (15%), Positives = 98/261 (37%), Gaps = 21/261 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----------- 50
             + +I      A +  +  +A+N++N +T GF+  + +F++++                
Sbjct: 1   MRALSIAATGMSAQQTNVEVIANNVANINTTGFKRARAEFTDLLYQTDRAAGTLARDDDT 60

Query: 51  ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRF 106
              + +Q    V +         G+   T  +LD AL+G  +F ++     I+ TR G F
Sbjct: 61  MIPEGNQIGLGVRTVAIRHLSMQGALAPTSNKLDLALDGRGYFQVQGENNEILYTRAGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIP-QKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
               +G LV+  G   + ++         Q +    V      + + +++  + + +   
Sbjct: 121 NKDANGQLVTLEGNVVIPNITIPSTATDVQINASGQVYAIIGATGQQQLLGQLSIANFAN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +    N         +        + +G+LE SN + + E+ ++I   + +
Sbjct: 181 ETGLDALGGNLFRENQASGAAVIGNPGDSGFAKIHQGYLESSNVDPVKEITELIAAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
              + +I   +       +N+
Sbjct: 241 EMNSKVISAADDMFSTITKNM 261


>gi|329297209|ref|ZP_08254545.1| Flagellar basal-body rod protein flgG [Plautia stali symbiont]
          Length = 260

 Score =  161 bits (408), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 41/259 (15%), Positives = 86/259 (33%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A +  +  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRSRAVFEDLMYQTLRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           G+   T    + A+ G  +F ++ P G    TRDG F
Sbjct: 61  TLPSGLQIGTGVRPVTTERLHNQGNLSQTSNSKNVAINGQGYFQVQMPDGTSAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V  +G LV+ +G      +                V    +   +   +  + L +   
Sbjct: 121 QVDQNGQLVTNAGFPVQPGITIPANATSITIARDGVVTVTQQGQTQPAQVGQLTLSTFMN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +            + +        + + ++E SN N   E+  MI   + +
Sbjct: 181 DAGLDSVGENLYQETQASGAPTESTPGQNGAGLLYQSYVETSNVNVAEELVTMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  I  +++ + +  +
Sbjct: 241 EINSKAISTSDQMLQKLTQ 259


>gi|254562217|ref|YP_003069312.1| flagellar basal-body rod protein flgF [Methylobacterium extorquens
           DM4]
 gi|254269495|emb|CAX25461.1| flagellar basal-body rod protein flgF [Methylobacterium extorquens
           DM4]
          Length = 246

 Score =  161 bits (408), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 65/247 (26%), Positives = 120/247 (48%), Gaps = 9/247 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN-----DIDQK 55
           MQ +  +G++AQ AL + L  +A+NM+N  T GF+    +F E +  + +       D++
Sbjct: 1   MQNALFVGVSAQTALARELDVIANNMANVSTTGFKARSARFQEYLMPVASADSFQRSDRR 60

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115
           +S+V      L    G        +  AL GDA+ A+++P+G+  TR+G F++   G+LV
Sbjct: 61  LSYVIDQGTPLDLTQGPVEPDSNPMHVALRGDAFLAVQTPQGLRYTRNGAFELDATGNLV 120

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
           ++ G     D    PI I Q++    +   G IS    +   + L +   +Q       +
Sbjct: 121 TSDGHAVQGD--GGPITIGQQETGLAIAPDGTISTNLGIRGRLRLVTFANAQALKSEGAN 178

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
             S   P  P    +GV ++ G LE SN   + EM +++ + + ++ ++++I   +    
Sbjct: 179 LFSSEAPARP--AGAGVHLEPGALERSNVKPVVEMTRLMDVNRTYSMVSSVISRLDDLRG 236

Query: 236 EAIRNIA 242
            AIR +A
Sbjct: 237 TAIRRLA 243


>gi|167623363|ref|YP_001673657.1| flagellar basal body rod protein FlgG [Shewanella halifaxensis
           HAW-EB4]
 gi|167353385|gb|ABZ75998.1| flagellar basal-body rod protein FlgG [Shewanella halifaxensis
           HAW-EB4]
          Length = 262

 Score =  161 bits (408), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 40/262 (15%), Positives = 91/262 (34%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  I      A +  +S +++N++N  TVGF+  +  F +++    +          
Sbjct: 1   MHPALWISKTGLDAQQTDISVISNNVANASTVGFKKSRAVFEDLLYQNVSQAGGISASNT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                    +             G+ ++T   LD  +EG  +F ++ P G    TR+G+F
Sbjct: 61  KLPNGLSIGAGTKVVATQEMFTQGNMLTTDNSLDLMVEGPGFFEVQLPDGTAAYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQK--GKVIATMGLYSVD 164
            + + G +V+    Y +    ++P                +       +V+  + +    
Sbjct: 121 SLDETGQIVTPGSGYVIQPAITIPEGATSITVSAEGEVSVKTPGNAENQVVGQLAIADFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +                       +++G LE SN N   E+  +I   + 
Sbjct: 181 NPSGLDPMGQNLYLETGASGTPIQGTASLDGMGAIRQGALETSNVNVTEELVNLIESQRI 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   ++ +    +N+
Sbjct: 241 YEMNSKVISAVDQMLSYVNQNL 262


>gi|262404538|ref|ZP_06081093.1| flagellar basal-body rod protein FlgG [Vibrio sp. RC586]
 gi|262349570|gb|EEY98708.1| flagellar basal-body rod protein FlgG [Vibrio sp. RC586]
          Length = 262

 Score =  161 bits (408), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 45/262 (17%), Positives = 96/262 (36%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           MQ +  +      A +  ++T+++N++N  T+GF+  +  F ++     N    +     
Sbjct: 1   MQPALWVSKTGLDAQQTNIATISNNLANASTIGFKKGRAVFEDLFYQNINQPGAQSSQNT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    +             G+  +T   LD  +EGD +F +  P   I  +R+G+F
Sbjct: 61  RLPSGLMLGAGSKVVATQKVHTHGNAQTTSNSLDMMIEGDGFFQILMPDGNIAYSRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD--EIFNVGEKGEISQKGKVIATMGLYSVD 164
            + D+G++V++   Y +     +P             V  +    Q  +V+  +      
Sbjct: 121 TLDDEGAIVTSGSGYRLQPEIVIPEDAISITIGNDGEVSVRVRGQQDNQVLGQITTVDFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +   P       ++          V++  LE SN N   E+  MI   + 
Sbjct: 181 NPGGLEPIGQNLYLPTGASGEPQEGVPGLDGLGDVRQSMLETSNVNVTEELVNMIEAQRV 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   +K +    + +
Sbjct: 241 YEMNSKVISAVDKMLSFVNQQL 262


>gi|163789641|ref|ZP_02184079.1| flagellar hook protein [Carnobacterium sp. AT7]
 gi|159875173|gb|EDP69239.1| flagellar hook protein [Carnobacterium sp. AT7]
          Length = 289

 Score =  161 bits (408), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 55/286 (19%), Positives = 103/286 (36%), Gaps = 47/286 (16%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN------DIDQ 54
           M  S   G+     ++ ++  +++N++N +T  F+T +V+F +++           +  Q
Sbjct: 1   MLKSLYSGVTGMKNIQTKMDVISNNIANVNTTAFKTGRVRFEDMLSQTNASAQTGINAQQ 60

Query: 55  KISFVASGKEYLSKEVGSFISTGTELDFALEG--DAWFALESPRGIILTRDGRFKVTDDG 112
               V  G        GS  STG  LDF +E    ++F ++       TRDG F    +G
Sbjct: 61  VGLGVQVGSIDTVMSGGSLQSTGRALDFGIENGDSSFFTVKEGDNTFYTRDGGFYTDPNG 120

Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ---------------------- 150
           +LV++ G      +A+ P             +   +S                       
Sbjct: 121 NLVTSGGLKVQGFVANPPAVNDTNFNPDTFVDGKTMSAITIPQSIGEGADKADLQSYSVD 180

Query: 151 ------------KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVT 193
                       K  V+  +GL S     G  +   +  +        E          +
Sbjct: 181 SKGFIVGSYSGGKSMVLGRVGLTSFSNPDGLQKSGGNLYTETANSGAPEAGSPGEPGYGS 240

Query: 194 VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           V+ GFLE SN +   E  +MI  ++ + + +  I  ++  + E I 
Sbjct: 241 VRSGFLEMSNVDLANEFTEMIVTSRSYQANSRSITTSDTMLEELIN 286


>gi|88858141|ref|ZP_01132783.1| flagellar biosynthesis; cell-distal portion of basal-body rod
           [Pseudoalteromonas tunicata D2]
 gi|88819758|gb|EAR29571.1| flagellar biosynthesis; cell-distal portion of basal-body rod
           [Pseudoalteromonas tunicata D2]
          Length = 262

 Score =  161 bits (408), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 41/262 (15%), Positives = 95/262 (36%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +  I      A +  +S +++N++N  TVG++  +  F +++    N    +     
Sbjct: 1   MHPALWISKTGLDAQQTDISVISNNLANASTVGYKKSRAVFEDLLYQNINQPGGRSSQDT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    +         +   G+ I+T   +D+ ++G  +F +  P   +  +R G+F
Sbjct: 61  EMPSGLMLGAGTKVVATQKNFSQGNMITTDNSMDWMIQGQGFFEVLLPDGSLAYSRAGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFN--VGEKGEISQKGKVIATMGLYSVD 164
               DG +V++   +PV    +VP          +  V  +        VI  + +    
Sbjct: 121 TTDGDGRVVTSGAGFPVQPEMNVPNDAQSLTISQDGEVSVRVRGQADNVVIGQLTISDFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +  +           +        + +G LE SN N+  E+  +I   + 
Sbjct: 181 NPSGLEPMGQNLFTETAVSGAPIQGNPGADGLGVIVQGALETSNVNTTEELVNLIETQRI 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   ++ +    + +
Sbjct: 241 YEMNSKVISSVDQMLNFINQQL 262


>gi|163758009|ref|ZP_02165097.1| flagellar basal-body rod protein [Hoeflea phototrophica DFL-43]
 gi|162284298|gb|EDQ34581.1| flagellar basal-body rod protein [Hoeflea phototrophica DFL-43]
          Length = 241

 Score =  161 bits (408), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 98/243 (40%), Positives = 154/243 (63%), Gaps = 4/243 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           MQ S  + L++Q+ALE+R++T+ADN++N +T GFR  ++KF+EV+    +     +SFV 
Sbjct: 1   MQGSLYVALSSQIALERRMNTLADNVANANTTGFRATEIKFNEVLA---DTGVANVSFVN 57

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
            G++YLS E G   +TG++LDFA+ G+AWF +E+P G +LT+DGRF +T  G LV+  G 
Sbjct: 58  QGEDYLSTENGGLRTTGSQLDFAIRGEAWFMVETPTGNMLTKDGRFTITQAGELVNIDGY 117

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
            PVLD    PIQ+    +    G  G ++Q G  I  +GLY  D+SQG+ R+ + G+ PN
Sbjct: 118 -PVLDPGGAPIQLNPAGDPPKAGRDGGLTQDGVRIGAIGLYQADLSQGYYRQGSLGVVPN 176

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
           +PP  + D +G  + +G++EDSN N + EM  +I +++ F + + +    E    EAIR 
Sbjct: 177 VPPEAVVDTAGTGLLQGYIEDSNVNPILEMTNLIMVSRAFENTSAMTRATEDVFKEAIRT 236

Query: 241 IAS 243
           + S
Sbjct: 237 LGS 239


>gi|34497161|ref|NP_901376.1| flagellar basal body rod protein FlgG [Chromobacterium violaceum
           ATCC 12472]
 gi|34103018|gb|AAQ59381.1| flagellar basal-body rod protein flgG [Chromobacterium violaceum
           ATCC 12472]
          Length = 262

 Score =  161 bits (408), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 44/262 (16%), Positives = 93/262 (35%), Gaps = 20/262 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  I      A + RL+ +A+N++N +T GF+  ++ F ++   ++           
Sbjct: 1   MNPALWISKTGIQAQDARLTAIANNLANVNTTGFKRDRMIFEDLFYQVEKQPGSKVDDNN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                 Q  +             G+  +T   LD A+ G  +  ++   G    TR G+ 
Sbjct: 61  VSPSGVQMGNGTRLVGSQKVFTEGNITTTNQSLDVAIIGQGFLQVKMANGETGYTRAGQL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEIS-QKGKVIATMGLYSVDM 165
            ++ DG L +A G     ++                      S    + +  + L S   
Sbjct: 121 SLSKDGVLQTAQGLPLEPEIRIPADATKISISETGEVAVTRGSGTTPEAVDRIQLASFIN 180

Query: 166 SQGFVRRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G +   ++            P    + +   +K+G LE SN   + EM  MI   + +
Sbjct: 181 PAGLLALGDNLFQKTDASGDANPGDPGNGALGKLKQGSLEGSNVQVVEEMVDMIAAQRTY 240

Query: 221 NSITTLIDENEKSMLEAIRNIA 242
              T ++   +  + +  +++ 
Sbjct: 241 EMNTKVLSAADNMLQQLGQSVR 262


>gi|15887898|ref|NP_353579.1| flagellar basal body rod protein FlgG [Agrobacterium tumefaciens
           str. C58]
 gi|20141428|sp|Q44338|FLGG_AGRT5 RecName: Full=Flagellar basal-body rod protein flgG; AltName:
           Full=Distal rod protein
 gi|15155490|gb|AAK86364.1| flagellar basal-body rod protein [Agrobacterium tumefaciens str.
           C58]
          Length = 262

 Score =  161 bits (408), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 43/261 (16%), Positives = 96/261 (36%), Gaps = 21/261 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----------- 50
             +  I      A +  L  +A+N++N +T G++  + +F++++   +            
Sbjct: 1   MRALAIAATGMDAQQTNLEVIANNIANINTTGYKRARAEFTDLLYQTERMQGVPNRANQA 60

Query: 51  ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
              +       V +         G+ I TG +LD A+ G  WF +E+     + +R G F
Sbjct: 61  IVPEGANIGLGVQTSAVRNIHTQGNLIETGNKLDVAIIGQGWFQIEAADGSTLYSRAGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
               DG+LV+  G   + ++                V  +   +     +  + + +   
Sbjct: 121 NKNADGNLVTVDGYNVIPNINIPTDAQDITITRTGQVTARIGNAADFTQLGQLTIANFAN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++  S                S   VK+ +LE SN +++ E+  +I   + +
Sbjct: 181 EAGLKPLGDNLFSQTPASGAPVVGVPDDPSYGYVKQSYLEGSNVDAVKEITDLITAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
              + +I   ++      +N+
Sbjct: 241 EMNSKVITTADEMASIVSKNL 261


>gi|84514831|ref|ZP_01002194.1| Flagellar distal rod protein [Loktanella vestfoldensis SKA53]
 gi|84510990|gb|EAQ07444.1| Flagellar distal rod protein [Loktanella vestfoldensis SKA53]
          Length = 261

 Score =  161 bits (408), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 46/261 (17%), Positives = 104/261 (39%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  + ++      A + R+  +A+N++N +TVGF++ +V F  ++  +K     +     
Sbjct: 1   MTNAMHVAKTGLNAQQTRMQVIANNLANLNTVGFKSDRVNFESLLYQVKRSGGDQTSEGT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    + V +         G  ++T    D A+EG  +F +  P   +  TR+G F
Sbjct: 61  ALTSALALGTGVRAVNTQKLYTQGGMVNTDNSFDLAIEGQGFFQVLMPDGRVGYTRNGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIP-QKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
             + DG++ +ASG     ++            +   V  +    ++ + +  + + S   
Sbjct: 121 SRSADGTMTTASGYVVQPEIRIPADATEVNISQDGLVSVRQAGEEEAQEVGQLTIASFAN 180

Query: 166 SQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
            +G      S ++  +          +      + +G LE SN N + ++ +MI   + +
Sbjct: 181 PRGLQPIGESFVTQTLASGAPTVAAPQAQGLGKLMQGALEGSNVNVVQQLVEMIETQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
              +  I  +++ M     N+
Sbjct: 241 EVSSKAISSSDEMMRYISNNL 261


>gi|167464160|ref|ZP_02329249.1| flagellar basal body rod protein FlgG [Paenibacillus larvae subsp.
           larvae BRL-230010]
          Length = 270

 Score =  161 bits (407), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 46/267 (17%), Positives = 93/267 (34%), Gaps = 28/267 (10%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--------- 51
           M  S   G++     + +L  + +N++N +T+GF+  +V F +++               
Sbjct: 1   MLRSMYSGISGMRGFQTKLDVIGNNIANVNTIGFKGSRVMFQDLMSQTIRGATGPTDTQG 60

Query: 52  ---IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI---ILTRDGR 105
                Q                   ++T  + D  +EGD +FA+++        LTR G 
Sbjct: 61  GVNGQQIGLGSTVASIDTLHTNTGAMNTYVKTDMRIEGDGYFAVKTSSESDTYYLTRAGN 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ----KGKVIATMGLY 161
           FKV     LV+A G   +              +     +          + + I  +G+ 
Sbjct: 121 FKVDAQRRLVTADGMLVLNSDGDPIEFSENMTDYSFGADGTITQILKGGEKETIGQIGVV 180

Query: 162 SVDMSQGFVRRENSGISPNIPPTPLEDL---------SGVTVKRGFLEDSNANSMYEMGQ 212
            V    G ++   +           +              T+  G LE SN +   E  +
Sbjct: 181 KVTNPSGLMKVGGNLFELTPNAHDGDPGISTPKNAETGTGTLMTGSLEMSNVDLTSEFTE 240

Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIR 239
           MI   + F + + +I  +++ + E + 
Sbjct: 241 MIVAQRGFQANSRIITTSDEVLQEVVN 267


>gi|222824019|ref|YP_002575593.1| flagellar distal rod protein FlgG [Campylobacter lari RM2100]
 gi|222539241|gb|ACM64342.1| flagellar distal rod protein FlgG [Campylobacter lari RM2100]
          Length = 264

 Score =  161 bits (407), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 38/263 (14%), Positives = 90/263 (34%), Gaps = 23/263 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  S     +  ++ + ++   ++N+SN +TVG++  + +F++++           S   
Sbjct: 1   MLRSLYTAASGMVSQQTQIDVTSNNISNVNTVGYKKSRAEFADLMYQTMKYAGTSTSSTT 60

Query: 61  SGKEY--------------LSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDG 104
                              +  E     ++   LD A+ G+  F         I  TR+G
Sbjct: 61  KHPSGIEVGLGSRVTAISKIFSEGSLKQTSTAGLDMAIAGNNGFFQIQMPDGTIAYTRNG 120

Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQKGKVIATMGLYSV 163
           +F    +G++V++ G   + +M                    +  +     I  + L + 
Sbjct: 121 QFTKDAEGNIVNSDGYRLLPEMTIPEDATAINVASDGTISVMQPGNTAETQIGQIELVNF 180

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
               G     ++ +                     +K GF+E SN   + EM  +I   +
Sbjct: 181 INPAGLHALGDNLLVETDASGAPIAGIAGENGFSPIKHGFVELSNVQLVEEMTDLITGQR 240

Query: 219 KFNSITTLIDENEKSMLEAIRNI 241
            + + +  I  ++  +   +  +
Sbjct: 241 AYEAGSKAITTSDDMLG-IVNQL 262


>gi|302872713|ref|YP_003841349.1| fagellar hook-basal body protein [Caldicellulosiruptor obsidiansis
           OB47]
 gi|302575572|gb|ADL43363.1| fagellar hook-basal body protein [Caldicellulosiruptor obsidiansis
           OB47]
          Length = 255

 Score =  161 bits (407), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 52/258 (20%), Positives = 104/258 (40%), Gaps = 21/258 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS-----------EVVGAIK 49
           M        +  +  ++ +   A+N++N +T GF+    +             + V +  
Sbjct: 1   MIRGIYTSASGMILNQKLMDITANNVANVNTTGFKRDVAQVESFRNMLVYRIYDKVSSPD 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP-----RGIILTRDG 104
           N I          +       G +I T   L+ A+ G+ +FA+E P     + I+ TR+G
Sbjct: 61  NAIGYMSLGADVSRIVSDFSQGLYIKTDEPLNLAIRGNGFFAIEVPGNQGAQQILYTRNG 120

Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
            F +   G LV+  G Y +         I Q      + E+G + Q G+ +  + +    
Sbjct: 121 AFTLNSQGELVTLDGFYVLG---QNGRIILQNGGQVRIDEQGNVYQDGRFVDRLRVVDFQ 177

Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224
             Q   +  N+    +      +      + +G+LE SN NS+ EM  MI++ + + +  
Sbjct: 178 DKQLLRKVGNNLFEADAT--AQQIPFSGRIVQGYLEGSNVNSVQEMVNMINVLRAYEANQ 235

Query: 225 TLIDENEKSMLEAIRNIA 242
                 ++++ +A+  IA
Sbjct: 236 KAFTIQDETLQKAVSEIA 253


>gi|209964690|ref|YP_002297605.1| flagellar basal body rod protein FlgG [Rhodospirillum centenum SW]
 gi|209958156|gb|ACI98792.1| flagellar basal-body rod protein FlgG [Rhodospirillum centenum SW]
          Length = 261

 Score =  161 bits (407), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 50/259 (19%), Positives = 98/259 (37%), Gaps = 21/259 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             S +IG    LA +  +  +++N++N  T GF+  + +F +++      +         
Sbjct: 1   MRSLSIGATGMLAQQLNVEVISNNIANMTTTGFKRQRAEFQDLLYQNMRRVGSTSSDAGT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V +   Y   E G+   TG  LD A+ G  +F +E P      TR G F
Sbjct: 61  VVPSGVQIGAGVKTAAVYRINEQGNISVTGNALDLAINGQGYFQVELPDGQTAYTRAGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           ++  +G++V+A G      +      +         V  K +   +   I  + L +   
Sbjct: 121 QLNAEGTIVTADGYQLQPGLVVPENAVDITVNPNGEVLVKLDGQTQPANIGQIQLATFPN 180

Query: 166 SQGFVRRENSGISP-----NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++ +       NI            V +  LE SN N + E+  +I   + +
Sbjct: 181 PAGLEAIGDNLLLESPASGNIIAGNPGAPGFGRVIQQALETSNVNIVSEITNLITAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              + +I  +++ M    +
Sbjct: 241 EMNSRVISTSDQMMQSISQ 259


>gi|87119674|ref|ZP_01075571.1| Flagella basal body rod protein [Marinomonas sp. MED121]
 gi|86165150|gb|EAQ66418.1| Flagella basal body rod protein [Marinomonas sp. MED121]
          Length = 261

 Score =  161 bits (407), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 44/261 (16%), Positives = 97/261 (37%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  +      A++++LS +++N++N  T GF+  +  F +++               
Sbjct: 1   MHPALWVSKTGLSAMDKQLSVISNNLANVSTTGFKKDRAVFEDLLYHTVQQPGGLQSQNT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                 Q  + V           G +  T  +LD A++G  +F +  P G +  TRDG+F
Sbjct: 61  QLPSGLQMGAGVRVSATQKDFSEGDYNVTDRDLDVAIQGQGFFQILMPDGNMGYTRDGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQKGKVIATMGLYSVDM 165
           ++  +G LV++SG      +      +                + + + +  + L     
Sbjct: 121 QLNSEGDLVTSSGFLVEPQVTIPQDAMSVTIGDDGTVSIVRQGASESEGVGQLSLAGFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
            +G      +                 T     V++  +E SN NS+ E+  +I   + +
Sbjct: 181 PEGLSSIGQNLFVETSASGAPIIDVPGTSALGNVRQNMVETSNVNSVEELVSLITAQRGY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
              + ++   +  M   I+ +
Sbjct: 241 EMNSKVVSAADGMMSFVIQQL 261


>gi|328948267|ref|YP_004365604.1| flagellar basal-body rod protein FlgG [Treponema succinifaciens DSM
           2489]
 gi|328448591|gb|AEB14307.1| flagellar basal-body rod protein FlgG [Treponema succinifaciens DSM
           2489]
          Length = 264

 Score =  161 bits (407), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 57/260 (21%), Positives = 97/260 (37%), Gaps = 22/260 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S           +  + T+++N+SN +T GF+  + +F +++               
Sbjct: 1   MVRSLWNAATGMNGQQMNIDTISNNLSNVNTTGFKQHRAEFEDLLYQNVKLAGTPATEDT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  S V  G        GS  +TG + D A+ GD +F ++   G    TRDG F
Sbjct: 61  VTPVGHQMGSGVKVGATQRIMTQGSLQATGVDTDVAVVGDGFFRVQQYDGSWAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF---NVGEKGEISQKGKVIATMGLYSV 163
           KV   G LV+A+G   + ++        +   I     V  K     +   +  + LY  
Sbjct: 121 KVDSTGQLVTANGLRVMPEIIMPEGFQLETLSISDGGRVNIKVNGELEPVEVGQLELYRF 180

Query: 164 DMSQGFVRRENSGI-SPNIPPTPLE----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
             + G     ++     N    P+            K  FLE SN + + EM QMI   +
Sbjct: 181 PNAVGLENTGDNLYKVTNASGEPIAGRPGIDGMGITKHKFLEMSNVSVVNEMVQMIVAQR 240

Query: 219 KFNSITTLIDENEKSMLEAI 238
            +   +  I  ++  +  A 
Sbjct: 241 AYEFNSKAIQTSDNMLQTAA 260


>gi|288958674|ref|YP_003449015.1| flagellar basal-body rod protein [Azospirillum sp. B510]
 gi|288910982|dbj|BAI72471.1| flagellar basal-body rod protein [Azospirillum sp. B510]
          Length = 240

 Score =  161 bits (407), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 63/242 (26%), Positives = 112/242 (46%), Gaps = 5/242 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M+ S  + ++ Q+AL+++L   ++N++N +T G++  ++ F+E +   K  + +K+SFV 
Sbjct: 1   MENSIYVAMSRQMALQRQLDVTSNNIANMNTTGYKNQRMLFTEFL--EKPGLHEKVSFVQ 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
                     G+   TG  LD AL G  +F +++  G   TR G F++ D   LV A G 
Sbjct: 59  DRAVVRDLSNGAMTQTGNPLDLALTGQGYFTVDTASGPRYTRAGNFRMNDQRQLVDA-GG 117

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
            PVL     PI +P       V   G ++ +   +A + + +    Q      N      
Sbjct: 118 LPVLSNNGQPITLPAGTSDVKVSGDGTVATELGPVAKLNIVTFKNEQLMTEVGNGLYVT- 176

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
               P    +   V +G LE SN   + EM QMI + +++ S   +ID   + +   I+ 
Sbjct: 177 -DEQPQPAPAETKVAQGLLEGSNVKPVVEMTQMIDIQRQYMSAQKMIDNEHERIRTMIQR 235

Query: 241 IA 242
           + 
Sbjct: 236 LG 237


>gi|85710166|ref|ZP_01041231.1| flagellar basal-body rod protein [Erythrobacter sp. NAP1]
 gi|85688876|gb|EAQ28880.1| flagellar basal-body rod protein [Erythrobacter sp. NAP1]
          Length = 263

 Score =  161 bits (407), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 46/260 (17%), Positives = 96/260 (36%), Gaps = 21/260 (8%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------- 55
           ++ ++      A + R+  +A+N++N  T GF+  + +F+ +         Q+       
Sbjct: 4   SALHVARTGLEAQDARMRVIANNLANIGTTGFKRDRAEFATLAYQEMRVAGQQSTQQTAF 63

Query: 56  ------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR--GIILTRDGRFK 107
                  + V        +  G+   TG  LD AL+G  +F +E P    I  TR G F 
Sbjct: 64  ATGLNLGTGVQVTGTSRIEAQGTLNQTGNSLDLALDGPGFFQVELPGGGDIAYTRAGNFT 123

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDMS 166
           ++ +G LV+  G      +                V            I  + + S    
Sbjct: 124 LSPEGQLVTTQGYALTPPIQVPQGAQNITIAPDGTVSAVQPGQTAPIQIGQLQVASFVNP 183

Query: 167 QGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221
            G     ++ +       P++           +++G LE SN N + E+ +MI   + + 
Sbjct: 184 AGLRAIGDNFLVETAASGPVDAGLAGQFGRGNIRQGMLETSNVNVVEELVEMIEAQRAYE 243

Query: 222 SITTLIDENEKSMLEAIRNI 241
             + ++   ++ +  A + +
Sbjct: 244 INSKMVSSVDEMLRNANQTL 263


>gi|300722680|ref|YP_003711970.1| flagellar basal-body rod cell-distal protein [Xenorhabdus
           nematophila ATCC 19061]
 gi|297629187|emb|CBJ89783.1| flagellar biosynthesis; cell-distal portion of basal-body rod
           [Xenorhabdus nematophila ATCC 19061]
          Length = 260

 Score =  161 bits (407), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 92/259 (35%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I        +  +  +A+N++N  T GF+  +V   E++   +           
Sbjct: 1   MIRSLWIAKTGLDVQQTNMDVIANNLANVSTSGFKRQRVVSEELIYQTERQPGAMSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                 Q  +             G+   T    D A++G  +F ++ P G    TRDG F
Sbjct: 61  NLPSGLQIGTGARPVATERLHSQGNLAQTNNTKDVAIKGQGFFQIQMPDGTTGYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V  +G LV+A G   V  +                +    +     + +  + L +   
Sbjct: 121 QVDQNGQLVTAGGFQVVPAIIIPDNATKIGIARDGIISVNVQGQNAPQQVGQLTLTTFIN 180

Query: 166 SQGFVRRENSGI-SPNIPPTPLEDLS----GVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +     N    P+E+         + +G++E SN N   E+  MI + + +
Sbjct: 181 ESGLESIGENLYLETNSSGVPVENAPGINGTGLLYQGYVETSNVNVAEELVNMIQVQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ + +  +
Sbjct: 241 EINSKAVSTSDQMLQKLTQ 259


>gi|330445350|ref|ZP_08309002.1| flagellar basal-body rod protein FlgG [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
 gi|328489541|dbj|GAA03499.1| flagellar basal-body rod protein FlgG [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
          Length = 262

 Score =  161 bits (407), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 48/262 (18%), Positives = 96/262 (36%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +  +      A +  +ST+++N++N  TVGF+  +  F ++     N    +     
Sbjct: 1   MHPALWVSKTGLDAQQTNISTISNNLANASTVGFKKGRAVFEDLFYQNINQPGGQSTQDT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    +             G+  +T   +D  +EGD +F +  P   I  TR+G+F
Sbjct: 61  TLPTGLMLGAGSKVVATQKVFTQGNTQTTNNAMDMMIEGDGFFQVLLPDGNIGYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD--EIFNVGEKGEISQKGKVIATMGLYSVD 164
            +  DG LV++   YPV     VP             V  +    Q+ +V+  +      
Sbjct: 121 TINADGQLVTSGSGYPVQPEIVVPEDAVGITVGTDGEVSARIRGEQENQVLGQITTVDFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +   P       ++         ++++  LE SN N   E+  MI   + 
Sbjct: 181 NPGGMEPIGQNLFLPTGASGDPQEGTPGLEGYGSIRQSMLETSNVNVTEELVNMIEAQRV 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   ++ +    + +
Sbjct: 241 YEMNSKVISTVDQMLSYVNQQL 262


>gi|319403955|emb|CBI77543.1| Flagellar basal-body rod protein flgF [Bartonella rochalimae ATCC
           BAA-1498]
 gi|319406971|emb|CBI80608.1| Flagellar basal-body rod protein flgF [Bartonella sp. 1-1C]
          Length = 244

 Score =  161 bits (407), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 74/241 (30%), Positives = 135/241 (56%), Gaps = 1/241 (0%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           MQ    +G++ Q+ LE+R+ T+A NM+N +T GF+   +KF  ++ ++ ++   ++ F +
Sbjct: 1   MQNPIYVGVSGQIGLERRMETIAQNMANVNTPGFQAGGMKFDTLLSSVAHEQGDRVFFTS 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           +GK Y+S + GS + TG  LD A+ GD++F++++  G + TRDGR  +T +G LVS +G 
Sbjct: 61  AGKGYISTDRGSLVETGNALDIAVVGDSYFSMQASFGQVYTRDGRMIMTPEGGLVSVTG- 119

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
            P LD    PIQ+        +   G I Q    +  +GL+            NS + P+
Sbjct: 120 LPFLDEGGAPIQLNPAGGTPRIVADGSIYQDNAFVGKIGLFQFQPGTQLRYGPNSSVIPD 179

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
                 E  SG TV +G++E SN N + EM ++I +++ F  + +++ + E+   ++I+ 
Sbjct: 180 KAAFQSEGGSGDTVVQGYIESSNVNGVIEMTRLIEVSRAFERVESMLRQQEEMRSKSIQI 239

Query: 241 I 241
           +
Sbjct: 240 L 240


>gi|328545467|ref|YP_004305576.1| flagellar basal body rod protein [polymorphum gilvum SL003B-26A1]
 gi|326415208|gb|ADZ72271.1| Flagellar basal body rod protein [Polymorphum gilvum SL003B-26A1]
          Length = 241

 Score =  161 bits (407), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 80/242 (33%), Positives = 147/242 (60%), Gaps = 4/242 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           MQ++  + L+AQ++L  RL TVA N++N +T G+R  ++KF+EV+     D    +SF  
Sbjct: 1   MQSALYVALSAQVSLSNRLETVARNVANMNTAGYRADEIKFAEVLSKAGAD---PVSFAT 57

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           +G+ Y+S++ G    T   LD A+EGD W A+ +  G++ TRDGR K+ +DG L + +G 
Sbjct: 58  AGERYISRQHGGLTRTDNPLDVAVEGDGWLAVRTGAGVVYTRDGRMKMDNDGVLRTLNGY 117

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
              LD   +PI + ++  +  +G  G ++Q   V   +GL+ +D      R +NSG+ P+
Sbjct: 118 DV-LDAGGLPILLDREGGMPVIGRDGTVTQGEDVAGALGLFRIDERAKLTRFDNSGVIPD 176

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
           IP  P+++ +   + +G++E +N N + E+ ++I +T+ F   T++I+ +++S  +AIR+
Sbjct: 177 IPAEPIQEFTSSGMVQGYVEGANINPIRELTKLIMITRAFEGATSMIEASDRSQEQAIRD 236

Query: 241 IA 242
           + 
Sbjct: 237 LG 238


>gi|146293688|ref|YP_001184112.1| flagellar basal body rod protein FlgG [Shewanella putrefaciens
           CN-32]
 gi|145565378|gb|ABP76313.1| flagellar basal-body rod protein FlgG [Shewanella putrefaciens
           CN-32]
 gi|319427087|gb|ADV55161.1| flagellar basal-body rod protein FlgG [Shewanella putrefaciens 200]
          Length = 262

 Score =  161 bits (407), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 93/262 (35%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  I      A +  ++ +++N++N  TVG++  +  F +++    N          
Sbjct: 1   MHPALWISKTGLDAQQTDIAVISNNVANASTVGYKKSRAVFEDLLYQTVNQAGGISASNT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    +             G+ ++T   LD  +EG  +F ++ P      TR+G+F
Sbjct: 61  KLPNGLNIGAGTKVVATQKMFTQGNMLTTDNSLDLMIEGPGFFEIQLPDGTTAYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEIS--QKGKVIATMGLYSVD 164
            + D G +V+    Y +    ++P                + +   + +V+  + +    
Sbjct: 121 TLDDTGQIVTPGSGYVLQPAITIPEDATSITVSAEGEVSVKTAGAAENQVVGQLSMTDFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +  +                    +++G LE SN N   E+  +I   + 
Sbjct: 181 NPSGLDPMGQNLYTETGASGTPIQGTASLDGMGAIRQGALETSNVNVTEELVNLIESQRI 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   ++ +    +N+
Sbjct: 241 YEMNSKVISAVDQMLAYVNQNL 262


>gi|325291939|ref|YP_004277803.1| flagellar basal body rod protein FlgG [Agrobacterium sp. H13-3]
 gi|325059792|gb|ADY63483.1| flagellar basal body rod protein FlgG [Agrobacterium sp. H13-3]
          Length = 262

 Score =  161 bits (407), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 96/261 (36%), Gaps = 21/261 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----------- 50
             +  I      A +  L  +A+N++N +T G++  + +F++++   +            
Sbjct: 1   MRALAIAATGMDAQQTNLEVIANNIANINTTGYKRARAEFTDLLYQTERMQGVPNRANQA 60

Query: 51  ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
              +       V +         G+ I TG +LD A+ G  WF +E+     + +R G F
Sbjct: 61  IVPEGANIGLGVQTSAVRNIHTQGNLIETGNKLDVAIIGQGWFQIEAADGSTLYSRAGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
               DG+LV+  G   + ++                V  +   +     +  + + +   
Sbjct: 121 NKNADGNLVTVDGYNVIPNINIPTDAQDITITRTGQVTARIGNAADFTELGQLTIANFAN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++  S                S   +K+ +LE SN +++ E+  +I   + +
Sbjct: 181 EAGLKPLGDNLFSQTPASGAAVIGVPDDPSYGYIKQSYLEGSNVDAVKEITDLITAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
              + +I   ++      +N+
Sbjct: 241 EMNSKVITTADEMASIVSKNL 261


>gi|120598234|ref|YP_962808.1| flagellar basal body rod protein FlgG [Shewanella sp. W3-18-1]
 gi|120558327|gb|ABM24254.1| flagellar basal-body rod protein FlgG [Shewanella sp. W3-18-1]
          Length = 262

 Score =  161 bits (407), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 93/262 (35%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  I      A +  ++ +++N++N  TVG++  +  F +++    N          
Sbjct: 1   MHPALWISKTGLDAQQTDIAVISNNVANASTVGYKKSRAVFEDLLYQTVNQAGGISASNT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    +             G+ ++T   LD  +EG  +F ++ P      TR+G+F
Sbjct: 61  KLPNGLNIGAGTKVVATQKMFTQGNMLTTDNSLDLMIEGPGFFEVQLPDGTTAYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEIS--QKGKVIATMGLYSVD 164
            + D G +V+    Y +    ++P                + +   + +V+  + +    
Sbjct: 121 TLDDTGQIVTPGSGYVLQPAITIPEDATSITVSAEGEVSVKTAGAAENQVVGQLSMTDFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +  +                    +++G LE SN N   E+  +I   + 
Sbjct: 181 NPSGLDPMGQNLYTETGASGTPIQGTASLDGMGAIRQGALETSNVNVTEELVNLIESQRI 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   ++ +    +N+
Sbjct: 241 YEMNSKVISAVDQMLAYVNQNL 262


>gi|163794152|ref|ZP_02188125.1| Flagellar basal body rod protein [alpha proteobacterium BAL199]
 gi|159180766|gb|EDP65285.1| Flagellar basal body rod protein [alpha proteobacterium BAL199]
          Length = 261

 Score =  161 bits (407), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 41/262 (15%), Positives = 95/262 (36%), Gaps = 22/262 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55
             S NI      A +  +  +++N++N +T G++  + +F +++      +         
Sbjct: 1   MQSLNIASTGMAAQQFNVEVISNNIANMNTTGYKRQRAEFQDLLYQDLRRVGTNSSDAGT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                      V +   Y   E G+   T  + D A+ G  +F +E P      TR G F
Sbjct: 61  IVPSGIQIGVGVKTAATYRINEQGALTLTDNKFDLAILGQGYFQVELPNGETAYTRAGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE-KGEISQKGKVIATMGLYSVDM 165
           +   DG+LV+  G      +      +            + +   + + +  + L     
Sbjct: 121 QTNQDGTLVTPDGYTVQPGITIPSDTLSVTINESGQVFAQIDGQVQEQNVGQLQLAIFQN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      + +                     +++GF+E SN + ++E+  +I   + +
Sbjct: 181 DAGLENIGQNLLLETSASGAATTGVPGATGFGKLQQGFVEASNVDPVHEITNLITAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNIA 242
              + +I+ +++ M   + N+ 
Sbjct: 241 ELNSKIIETSDQMM-STVNNVR 261


>gi|296531727|ref|ZP_06894555.1| flagellar basal-body rod protein FlgG [Roseomonas cervicalis ATCC
           49957]
 gi|296267943|gb|EFH13742.1| flagellar basal-body rod protein FlgG [Roseomonas cervicalis ATCC
           49957]
          Length = 260

 Score =  161 bits (407), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 46/258 (17%), Positives = 89/258 (34%), Gaps = 20/258 (7%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             + NI      A +  +  +A N++N  T  F   K +F +++      +         
Sbjct: 1   MRAMNIAATGMQAQQTNVEVIAHNIANVSTTAFTRRKAEFQDLLYQSGERVGSASSEAGT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q    V +         G+   TG   D ALEG  +F ++ P G    TRDG F
Sbjct: 61  LLPVGTQVGLGVRNSAINRITVQGTLNETGNRYDLALEGRGYFGIDLPDGTVAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           K++ +G +V+  G      +                    + + + +    + L+     
Sbjct: 121 KLSQEGQIVTTEGYPIQPAINVPIDARDVTVNQAGEVLVTQANGQQQNAGRLNLFLFPNE 180

Query: 167 QGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221
            G      +                       V++G+LE SN N + E+ Q+I   + + 
Sbjct: 181 AGLEAIGGNKFLETEASGQPNQGLPSDPGYARVRQGYLEASNVNVVQEITQLIAAQRAYE 240

Query: 222 SITTLIDENEKSMLEAIR 239
             + +I+  ++ +  A  
Sbjct: 241 MNSKVIEATDQMLQTANN 258


>gi|256376465|ref|YP_003100125.1| hypothetical protein Amir_2339 [Actinosynnema mirum DSM 43827]
 gi|255920768|gb|ACU36279.1| protein of unknown function DUF1078 domain protein [Actinosynnema
           mirum DSM 43827]
          Length = 276

 Score =  161 bits (407), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 44/273 (16%), Positives = 93/273 (34%), Gaps = 34/273 (12%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50
           M  S   G++   A +Q +    +N+SN +T GF++ +  F + +               
Sbjct: 1   MLRSLFSGISGLRAHQQMMDVTGNNISNVNTTGFKSSQTVFEDTLSQTLRAAQAAGANTA 60

Query: 51  --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
             +  Q    V +     +   G+  STG   D  ++GD +F + S    + TR G    
Sbjct: 61  ATNPAQVGLGVRTAGINTNFNQGTTQSTGRNTDMLIQGDGFFVVNSSGQQLYTRAGALSF 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEI-----------------FNVGEKGEISQK 151
              G L + +G      MA+    + +   +                          +  
Sbjct: 121 DAAGQLTTPAGGILQGWMANGAGVVDKNQPVAGLTVDKGTYTSFSVSGDGTIVGVLANGT 180

Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANS 206
            + +  + + +     G  +   S     +   P++           V  G LE SN + 
Sbjct: 181 PRTVGQIAMANFANPGGLDKAGGSFYRATVNSGPVQIGGAGDNGTGAVVSGALEMSNVDL 240

Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             E   +I   + F + + +I  +++ + + + 
Sbjct: 241 SQEFTNLIIAQRGFQANSKVITSSDEILQDLMN 273


>gi|319405396|emb|CBI79015.1| Flagellar basal-body rod protein flgF [Bartonella sp. AR 15-3]
          Length = 244

 Score =  161 bits (407), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 75/241 (31%), Positives = 134/241 (55%), Gaps = 1/241 (0%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           MQ    +G++ Q+ LE+R+ T+A NM+N +T GFR   +KF  +V ++ ++    + F +
Sbjct: 1   MQNPIYVGVSGQIGLERRMETIAQNMANVNTPGFRAGGMKFDTLVSSVAHEQGDHVFFTS 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           +GK Y+S + GS I TG  LD A+ GD++F++++  G + TRDGR  +T +G LVS +G 
Sbjct: 61  AGKGYISTDRGSLIQTGNALDIAVTGDSYFSMQASFGQVYTRDGRMIMTPEGGLVSVTG- 119

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
            P LD    PIQ+     +  +   G I Q    +  +GL+            NS + P+
Sbjct: 120 LPFLDEGGAPIQLNPAGGMLRIVTDGSIYQDNVFVGKIGLFQFQPGTQLRYGPNSSVIPD 179

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
                 E+ +G  V +G++E SN N + EM ++I +++ F  +  ++ + E+   ++I+ 
Sbjct: 180 RAAFQSEEGNGDGVVQGYIESSNVNGVIEMTRLIEVSRAFERVEAMLRQQEEMRSKSIQI 239

Query: 241 I 241
           +
Sbjct: 240 L 240


>gi|323139654|ref|ZP_08074696.1| flagellar basal-body rod protein FlgG [Methylocystis sp. ATCC
           49242]
 gi|322395086|gb|EFX97645.1| flagellar basal-body rod protein FlgG [Methylocystis sp. ATCC
           49242]
          Length = 262

 Score =  161 bits (407), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 40/257 (15%), Positives = 86/257 (33%), Gaps = 21/257 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----------- 50
             +  I      A +Q +  +A N++N +T GF+  + +F++++                
Sbjct: 1   MRALAIAATGMSAQQQNIEVIAHNIANINTTGFKRSRAEFTDLLYQTDRLQGVSNRGRDA 60

Query: 51  ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRF 106
                 Q    V +      ++ G   +TG   D ++ G  WF +  S    + TR G F
Sbjct: 61  TVPQGAQFGLGVRAAAVRSLQQQGPLTNTGNMYDLSMNGRGWFQILGSDNETLYTRAGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIP-QKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
              ++G LV+  G      +      +     +   V        + + I  + + +   
Sbjct: 121 STNNNGQLVTVDGYLLTPTITIPNNTLNVSVSQSGIVSAIVAGQTQPQQIGQLTVANFAN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +                       + +G+LE SN + + E+  +I   + F
Sbjct: 181 ESGLEALGGNLFRETYASGQPIVGIPGDPGFGVINQGYLESSNVDPVKELVSLISAQRAF 240

Query: 221 NSITTLIDENEKSMLEA 237
              + +I   ++     
Sbjct: 241 ELNSKVIQAADEMAGTI 257


>gi|323495375|ref|ZP_08100452.1| flagellar basal body rod protein FlgG [Vibrio brasiliensis LMG
           20546]
 gi|323310298|gb|EGA63485.1| flagellar basal body rod protein FlgG [Vibrio brasiliensis LMG
           20546]
          Length = 262

 Score =  161 bits (407), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 48/262 (18%), Positives = 95/262 (36%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +  +      A +  +ST+++N++N  TVG++  +  F ++     N    +     
Sbjct: 1   MHPALWVSKTGLDAQQTNISTISNNLANASTVGYKKSRAVFEDLFYQNINQPGGQSSQNT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    +             G+  +T   LD  +EGD +F +  P   I  TR+G+F
Sbjct: 61  ELPSGLMLGAGSKVVATQKVHTQGNTQTTNNSLDMMIEGDGFFQILMPDGNIGYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD--EIFNVGEKGEISQKGKVIATMGLYSVD 164
            V D+G +V++   Y +    ++P             V  +    Q  +V+  +      
Sbjct: 121 TVNDEGVIVTSGAGYALEPEIAIPEDAISVTIGTDGEVSVRVRGQQDNQVVGQIATVDFV 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +   P       ++          V++  LE SN N   E+  MI   + 
Sbjct: 181 NPGGLEPIGQNLYLPTGASGDPQEGVPGFDGFGEVRQSMLETSNVNVTEELVNMIEAQRV 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   +K M    + +
Sbjct: 241 YEMNSKVISAVDKMMSFVNQQL 262


>gi|307945666|ref|ZP_07661002.1| flagellar basal-body rod protein FlgG [Roseibium sp. TrichSKD4]
 gi|307771539|gb|EFO30764.1| flagellar basal-body rod protein FlgG [Roseibium sp. TrichSKD4]
          Length = 260

 Score =  161 bits (407), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 43/258 (16%), Positives = 90/258 (34%), Gaps = 20/258 (7%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             + +I      A E+ +  +++N++N  T G++  +V F +++                
Sbjct: 1   MKALHIAATGMKAQERNVEVISNNVANLRTTGYKRQRVDFQDLMYQNLRRAGSETSTAGT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  S V           G+   TG +LD A+ G+ +F +E P      TRDG F
Sbjct: 61  IVPTGVQIGSGVKVAATSRIMSQGAVEQTGKDLDLAVRGEGFFQIEMPDGTTAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           +   +G+LV+  G   V  +                    +       +  + L      
Sbjct: 121 ERDPNGTLVTVDGYTVVPGITIPEDSRNITISTDGTVSAVDAGGATVNLGQIQLARFVNK 180

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFN 221
            G     ++         P +  +        V++ FLE +N +++ E+  +I   + + 
Sbjct: 181 AGLEAIGDNLFYETEASGPAQVDNPGGNGFGNVQQYFLEMANVDAVTEIADLISAQRAYE 240

Query: 222 SITTLIDENEKSMLEAIR 239
             + +I   ++       
Sbjct: 241 MNSRVIKAADEMYSTTSN 258


>gi|119384846|ref|YP_915902.1| flagellar basal body rod protein FlgF [Paracoccus denitrificans
           PD1222]
 gi|119374613|gb|ABL70206.1| flagellar basal body rod protein [Paracoccus denitrificans PD1222]
          Length = 238

 Score =  161 bits (407), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 61/241 (25%), Positives = 114/241 (47%), Gaps = 5/241 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    L  Q  L + + TVA+N++N +T GFR   V FSE +  +     + ++   
Sbjct: 1   MDNAIYAALTRQSGLMREMHTVANNIANANTTGFRREGVVFSEYMVPLDRR-GETLAMAN 59

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
                +    G    T  + D A++G+ +  +++P+G  LTR G F    +G LV+  G 
Sbjct: 60  GRGRMIDLGPGGMTQTNGQFDLAIDGEGFLMVQTPQGNRLTRAGAFMTNAEGELVNPDG- 118

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
           + +LD  + PI IP       +G  G IS  G  +  +G+++            +   P 
Sbjct: 119 HQLLDDGAAPIVIPAGVGSIGIGADGTISADGNPVGRVGVFASPDPARLRHEAGTLFDPG 178

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
               PLE      +++GFLEDSN + + E+ +MI + + +    + +D+ ++ + + I +
Sbjct: 179 GAVDPLEG---AVLRQGFLEDSNVDPVQEIARMIEVQRAYQLGQSFLDQEDQRIRQTITS 235

Query: 241 I 241
           +
Sbjct: 236 L 236


>gi|114765244|ref|ZP_01444376.1| Flagellar basal body rod protein [Pelagibaca bermudensis HTCC2601]
 gi|114542379|gb|EAU45407.1| Flagellar basal body rod protein [Roseovarius sp. HTCC2601]
          Length = 261

 Score =  161 bits (406), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 43/261 (16%), Positives = 97/261 (37%), Gaps = 22/261 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             +  I     +A +  +  +++N++N +T GF++ +  F++++   ++           
Sbjct: 1   MKALGIAATGMMAQQTNVDVISNNIANANTTGFKSARASFTDLIYENQSREGAVTAEEGT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                      V S         G    T ++LD A++G  +F +  P      TRDG F
Sbjct: 61  TRPIGLDIGLGVRSVGTLRLNTQGGLTQTESQLDLAIDGRGYFTVNLPDGDQAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQI-PQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +++ +G +V+  G      +         +  E   V    E       +  + L +   
Sbjct: 121 RLSAEGQIVNHQGFEIDPGVVLPDNTTAVEISETGIVSAYVEGDPIPVEVGQLTLTTFVN 180

Query: 166 SQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     N+ +   +           D     +++G+LE SN + + ++  +I   + +
Sbjct: 181 DAGMRPLGNNLLEATVASGDAIPALPGDAGVGILRQGYLEASNVDIIRQITDLIQAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
              +  I+  ++ M  A   I
Sbjct: 241 EMNSKAIETADQMM-SAANQI 260


>gi|260774940|ref|ZP_05883841.1| flagellar basal-body rod protein FlgG [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260609195|gb|EEX35353.1| flagellar basal-body rod protein FlgG [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 262

 Score =  161 bits (406), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 47/262 (17%), Positives = 96/262 (36%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +  +      A +  +ST+++N++N  TVG++  +  F ++     N    +     
Sbjct: 1   MHPALWVSKTGLDAQQTNISTISNNLANASTVGYKKSRAVFEDLFYQNINQPGGQSSQNT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    +             G+  +T   LD  +EGD +F +  P   I  +R+G+F
Sbjct: 61  ELPSGLMLGAGSKVVATQKVHTQGNTQTTNNSLDMMIEGDGFFQILMPDGNIGYSRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD--EIFNVGEKGEISQKGKVIATMGLYSVD 164
            V D+G +V++   YP+    ++P             V  +    Q  +V+  +      
Sbjct: 121 TVNDEGVVVTSGAGYPLEPEIAIPEDAISITIGTDGEVSVRVRGQQDNQVVGQIATVDFV 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +   P       ++          +++  LE SN N   E+  MI   + 
Sbjct: 181 NPGGLEPIGQNLYLPTGASGDPQEGVPGFDGFGDIRQSMLETSNVNVTEELVNMIEAQRV 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   +K M    + +
Sbjct: 241 YEMNSKVISAVDKMMSFVNQQL 262


>gi|163750568|ref|ZP_02157806.1| flagellar basal-body rod protein FlgG [Shewanella benthica KT99]
 gi|161329723|gb|EDQ00712.1| flagellar basal-body rod protein FlgG [Shewanella benthica KT99]
          Length = 262

 Score =  161 bits (406), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 43/262 (16%), Positives = 95/262 (36%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           MQ +  I      A +  +S +++N++N  T+G++  +  F +++    N          
Sbjct: 1   MQAALWISKTGLDAQQTNISVISNNLANASTIGYKKSRAVFEDLLYQTVNQAGGISASNT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                    +             G+ ++T   LD  +EG  +F ++ P G    TR+G+F
Sbjct: 61  KLPNGLNIGAGTKVVATQKVFTQGNMLTTDNSLDMMIEGPGFFEIQLPDGTAAYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVG--EKGEISQKGKVIATMGLYSVD 164
            + D G +V++   Y V    ++P                K   + + +V+  + +    
Sbjct: 121 TLDDTGQIVTSGSGYVVQPAITIPDNATSITVSAEGEVSVKMPGTIENQVVGQLSMSDFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +                       +++G LE SN N   E+  +I   + 
Sbjct: 181 NPSGLDPMGQNLYLETGASGTPIQGTASLDGMGAIRQGALETSNVNVTEELVNLIQSQRI 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   ++ +    +N+
Sbjct: 241 YEMNSKVISAVDQMLSYVNQNL 262


>gi|90579911|ref|ZP_01235719.1| putative polar flagellar FlgG [Vibrio angustum S14]
 gi|90438796|gb|EAS63979.1| putative polar flagellar FlgG [Vibrio angustum S14]
          Length = 262

 Score =  161 bits (406), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 47/262 (17%), Positives = 96/262 (36%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +  +      A +  +ST+++N++N  TVGF+  +  F ++     N    +     
Sbjct: 1   MHPALWVSKTGLDAQQTNISTISNNLANASTVGFKKGRAVFEDLFYQNINQPGGQSTQDT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    +             G+  +T   +D  +EGD +F +  P   I  TR+G+F
Sbjct: 61  TLPTGLMLGAGSKVVATQKVFTQGNTQTTNNAMDMMIEGDGFFQVLLPDGNIGYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD--EIFNVGEKGEISQKGKVIATMGLYSVD 164
            +  +G LV++   YPV     VP             V  +    Q+ +V+  +      
Sbjct: 121 TINSEGQLVTSGSGYPVQPEIVVPDDAVGITVGTDGEVSARIRGEQENQVLGQITTVDFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +   P       ++         ++++  LE SN N   E+  MI   + 
Sbjct: 181 NPGGMEPIGQNLFLPTGASGDPQEGTPGLEGYGSIRQSMLETSNVNVTEELVNMIEAQRV 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   ++ +    + +
Sbjct: 241 YEMNSKVISTVDQMLSYVNQQL 262


>gi|89075497|ref|ZP_01161908.1| putative polar flagellar FlgG [Photobacterium sp. SKA34]
 gi|89048769|gb|EAR54340.1| putative polar flagellar FlgG [Photobacterium sp. SKA34]
          Length = 262

 Score =  161 bits (406), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 47/262 (17%), Positives = 96/262 (36%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +  +      A +  +ST+++N++N  TVGF+  +  F ++     N    +     
Sbjct: 1   MHPALWVSKTGLDAQQTNISTISNNLANASTVGFKKGRAVFEDLFYQNINQPGGQSTQDT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    +             G+  +T   +D  +EGD +F +  P   I  TR+G+F
Sbjct: 61  TLPTGLMLGAGSKVVATQKVFTQGNTQTTNNAMDMMIEGDGFFQVLLPDGNIGYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD--EIFNVGEKGEISQKGKVIATMGLYSVD 164
            +  +G LV++   YPV     VP             V  +    Q+ +V+  +      
Sbjct: 121 TINSEGQLVTSGSGYPVQPEIVVPEDAVGITVGTDGEVSARIRGEQENQVLGQITTVDFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +   P       ++         ++++  LE SN N   E+  MI   + 
Sbjct: 181 NPGGMEPIGQNLFLPTGASGDPQEGTPGLEGYGSIRQSMLETSNVNVTEELVNMIEAQRV 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   ++ +    + +
Sbjct: 241 YEMNSKVISTVDQMLSYVNQQL 262


>gi|91204384|emb|CAJ70884.1| strongly similar to flagellar hook protein [Candidatus Kuenenia
           stuttgartiensis]
          Length = 250

 Score =  161 bits (406), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 65/240 (27%), Positives = 103/240 (42%), Gaps = 4/240 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M +    G    +   +  + +A N++N +TVG++     F   V   KN   +      
Sbjct: 9   MISGLYTGATNMMGQGEYQAVIARNLANVNTVGYKKNIAVFESFVAGAKNQAKEASEGTG 68

Query: 61  SG--KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSAS 118
           S   K       G    TG ELD A++GD +F +++  GI  TR G+F ++ D ++V+  
Sbjct: 69  SSLGKVATDFSPGVMQFTGNELDLAIKGDGFFEVQTKAGIAYTRSGQFMLSRDRTVVTPE 128

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178
           G    L  +  PIQIP K + F     G +S  GK I+ + + +     G      S   
Sbjct: 129 GW--PLMSSGGPIQIPAKAQSFTFKTDGSVSVDGKTISKLNIVNFLNPDGLTSIGGSAYV 186

Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            +    P      V + +G+LE SN N + EM  MI   + F S     D    S+ + I
Sbjct: 187 ASDKANPTTADGTVEIAQGYLEKSNVNVIDEMVNMIANMRSFQSGNKSTDSINDSLKKLI 246


>gi|332162899|ref|YP_004299476.1| Lateral flagellar rod protein [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|318604254|emb|CBY25752.1| flagellar basal-body rod protein FlgG [Yersinia enterocolitica
           subsp. palearctica Y11]
 gi|325667129|gb|ADZ43773.1| Lateral flagellar rod protein [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330863349|emb|CBX73472.1| flagellar basal-body rod protein flgG [Yersinia enterocolitica
           W22703]
          Length = 261

 Score =  161 bits (406), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 91/261 (34%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  +      A + +++ +++N++N +T GF+  +V F ++    +           
Sbjct: 1   MNPALWVSKTGLAAQDAKMNAISNNLANVNTDGFKRDRVVFEDLFYQNQRTPGAPLDQNN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106
                 Q  S V          VG+   T  +LD A+ G  +F +E+   G+  TR G  
Sbjct: 61  ATPNGIQFGSGVKVVGTQKQFTVGNIKVTKGDLDVAIAGQGFFQVETSDGGLAYTRAGNL 120

Query: 107 KVTDDGSLVSASGKY-PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
            +  DG L +A G             +     +   V  +     +   +  + L +   
Sbjct: 121 SINADGVLTNAQGLPLIPQIELPAGAKDLAIGKDGTVTARLGGDAESAELGQITLVNFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +     +      +      +   ++ G LE SN   + EM  MI + + +
Sbjct: 181 PAGLEAVGGNMYKETVASGAAVEGVAGEEAFGQLEHGSLEGSNVQVVEEMVDMITVQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
                ++   +  +    + +
Sbjct: 241 EMNAKMVSAADDMLKFVTQKL 261


>gi|126734107|ref|ZP_01749854.1| flagellar basal-body rod protein FlgG [Roseobacter sp. CCS2]
 gi|126716973|gb|EBA13837.1| flagellar basal-body rod protein FlgG [Roseobacter sp. CCS2]
          Length = 261

 Score =  161 bits (406), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 98/259 (37%), Gaps = 21/259 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             +  I  A   A + R+  +++N++N +T G+   + +F+++                 
Sbjct: 1   MRALKIAAAGMTAQQMRVEVISNNLANMNTTGYNPRRAEFADLHYQQLVRPGTINASDGT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q    V      +    G+  +TG +LD A+EGD +  +  P      TRDG  
Sbjct: 61  VLPTGIQLGLGVRPSAISVMLSQGALGATGGDLDLAIEGDGYLEVTLPSGASAYTRDGAL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE-KGEISQKGKVIATMGLYSVDM 165
           K+T DG +V++ G   V D+                         + +++    L     
Sbjct: 121 KLTGDGLIVTSDGYPVVPDLTVPRDTRSLSINAEGEVFGYFIDEIQPQLLGQFSLAGFTN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
           ++G     ++         P    +        +++G+LEDS+ + + E+  +I   + +
Sbjct: 181 AKGLEAIGSNLFLETPASGPSVVGTPGEDGLGVLRQGYLEDSSVDPVREVTDLIEAQRGY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              + +I   ++ +   ++
Sbjct: 241 ELNSKVITAADQMLSAMVQ 259


>gi|330447905|ref|ZP_08311553.1| flagellar basal-body rod protein FlgG [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
 gi|328492096|dbj|GAA06050.1| flagellar basal-body rod protein FlgG [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
          Length = 261

 Score =  161 bits (406), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 41/261 (15%), Positives = 97/261 (37%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M ++  +      A + +++ +++N++N +TVGF+  +V F ++  +I+           
Sbjct: 1   MHSALWVSKTGMAAQDTKMTAISNNLANVNTVGFKRDRVVFEDLFYSIQRQPGAQVDQLN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106
                 Q  S V           G+  +T  +LD A+ G  +F +E+    ++ +R+G+F
Sbjct: 61  QLPSGVQLGSGVRVVGTQKVFTQGNSQNTQQQLDLAVMGSGFFQIENSDGQVMYSRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165
            V  +G +V+  G      +            +  +         + + +  + L     
Sbjct: 121 HVNSEGLMVNGQGLPLQPQIQIPEEANSISIGVDGIVTATLAGDPEPQELGQITLAKFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +           ++         ++K+G LE SN   + EM  MI   + +
Sbjct: 181 PAGLEAVGGNLYKETQASGQAQEIIAGTDGAGSLKQGALEGSNVQVVEEMVDMITTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
                ++   +  +    + +
Sbjct: 241 EMNAKVVSAADDMLKFVAQAV 261


>gi|269103188|ref|ZP_06155885.1| flagellar basal-body rod protein FlgG [Photobacterium damselae
           subsp. damselae CIP 102761]
 gi|268163086|gb|EEZ41582.1| flagellar basal-body rod protein FlgG [Photobacterium damselae
           subsp. damselae CIP 102761]
          Length = 262

 Score =  161 bits (406), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 47/262 (17%), Positives = 96/262 (36%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +  +      A +  +ST+++N++N  TVGF+  +  F ++     N    +     
Sbjct: 1   MHPALWVSKTGLDAQQTNISTISNNLANASTVGFKKGRAVFEDLFYQNINQPGGQATQDS 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                    +             G+  +T   +D  +EGD +F +  P G +  TR+G+F
Sbjct: 61  TLPTGLMLGAGSKVVATQKVFTQGNTQTTNNAMDMMIEGDGFFQILLPDGNMGYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD--EIFNVGEKGEISQKGKVIATMGLYSVD 164
            +  +G LV+    Y V     VP             V  +    Q+ +V+  +      
Sbjct: 121 TINAEGQLVTTGSGYVVQPEIVVPEDAVGITVGTDGEVSARIRGQQENQVLGQLTTVDFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +   P       ++ +       T+++  LE SN N   E+  MI   + 
Sbjct: 181 NPGGLEPIGQNLFLPTGASGDAQEGTPGLDGLGTIRQSMLETSNVNVTEELVNMIEAQRV 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   ++ +    + +
Sbjct: 241 YEMNSKVISTVDQMLSYVNQQL 262


>gi|89068731|ref|ZP_01156117.1| hypothetical protein OG2516_06821 [Oceanicola granulosus HTCC2516]
 gi|89045694|gb|EAR51756.1| hypothetical protein OG2516_06821 [Oceanicola granulosus HTCC2516]
          Length = 261

 Score =  161 bits (406), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 50/258 (19%), Positives = 97/258 (37%), Gaps = 23/258 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             +  I     LA +  +  +++N++N +T GF++ +  F +++                
Sbjct: 1   MKALGIATTGMLAQQTNVDVISNNIANANTTGFKSSRAAFQDLIYQNVAREGALTAEDGT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                      V +         G  I+TG +LD A++G  +FA+  P      TRDG F
Sbjct: 61  VRPTGVDIGLGVQTVGTVRLNTQGGLIATGNDLDLAIDGPGYFAVNLPDGSQGYTRDGGF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIP-QKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V  +G LV+  G      +    +    + +E   V    E       +  + L +   
Sbjct: 121 RVNAEGQLVNLQGHEIDPGLVIPELTTKVEINESGVVMAYVENDPAPVELGQLTLTTFMN 180

Query: 166 SQGFVRRENSGI------SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
             G     N+           +P  P E      +++G LE SN N + ++  +I   + 
Sbjct: 181 DSGLRPVGNNLFLQSEASGEPVPAVPGEPG-IGIIRQGHLEGSNVNIIQQITDLIAAQRA 239

Query: 220 FNSITTLIDENEKSMLEA 237
           +   +  I+  ++ M  A
Sbjct: 240 YEMNSKAIETADQMMNTA 257


>gi|118588711|ref|ZP_01546119.1| Flagellar basal-body rod FlgG [Stappia aggregata IAM 12614]
 gi|118438697|gb|EAV45330.1| Flagellar basal-body rod FlgG [Stappia aggregata IAM 12614]
          Length = 260

 Score =  161 bits (406), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 45/258 (17%), Positives = 90/258 (34%), Gaps = 20/258 (7%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             + +I      A E  +  +++N++N  T GF+  +  F +++      +         
Sbjct: 1   MKALHIAATGMKAQELNVEVISNNVANMRTTGFKKQRADFQDLLYQNLRRMGTETSDSGT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  S V           GS   TG ELD A+ G+ +F ++ P      TRDG F
Sbjct: 61  IVPTGIQIGSGVKIAATGRIMSQGSLEQTGKELDLAIRGEGFFQIDMPDGTTAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           +   +G LV+  G      +               V +  + +     +  + L      
Sbjct: 121 ERDANGQLVTIDGYSVNPGITIPQTVKDVTISNTGVVQGVDQAGNTVQLGQIQLARFVNK 180

Query: 167 QGFVRRENSGISPNIPPTPLEDLS-----GVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221
            G     ++           E  +       TV++ FLE +N +++ E+  +I   + + 
Sbjct: 181 AGLEAIGDNLYLETDASGAPETSNPGDESYGTVQQYFLEMANVDAVTEIADLISAQRAYE 240

Query: 222 SITTLIDENEKSMLEAIR 239
             + +I   ++       
Sbjct: 241 MNSQIIQAADEMYSTTTN 258


>gi|261211320|ref|ZP_05925608.1| flagellar basal-body rod protein FlgG [Vibrio sp. RC341]
 gi|260839275|gb|EEX65901.1| flagellar basal-body rod protein FlgG [Vibrio sp. RC341]
          Length = 262

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 46/262 (17%), Positives = 96/262 (36%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           MQ +  +      A +  ++T+++N++N  T+GF+  +  F ++     N    +     
Sbjct: 1   MQPALWVSKTGLDAQQTNITTISNNLANASTIGFKKGRAVFEDLFYQNINQPGAQSSQNT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    +             G+  +T   LD  +EGD +F +  P   I  +R+G+F
Sbjct: 61  RLPSGLMLGAGSKVVATQKVHTHGNAQTTSNSLDMMIEGDGFFQILMPDGNIAYSRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD--EIFNVGEKGEISQKGKVIATMGLYSVD 164
            + D+G++V++   Y +     +P             V  +    Q  +V+  +      
Sbjct: 121 TLDDEGAIVTSGSGYRLQPEIIIPEDAISITIGNDGEVSVRVRGQQDNQVLGQITTVDFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +   P       ++          V++  LE SN N   E+  MI   + 
Sbjct: 181 NPGGLEPIGQNLYLPTGASGEPQEGVPGLDGLGDVRQSMLETSNVNVTEELVNMIEAQRV 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   +K M    + +
Sbjct: 241 YEMNSKVISAVDKMMSFVNQQL 262


>gi|238762358|ref|ZP_04623329.1| Lateral flagellar rod protein (FlgG-like) [Yersinia kristensenii
           ATCC 33638]
 gi|238699343|gb|EEP92089.1| Lateral flagellar rod protein (FlgG-like) [Yersinia kristensenii
           ATCC 33638]
          Length = 261

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 43/261 (16%), Positives = 89/261 (34%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  I      A + +++ +++N++N +T GF+  +V F ++    +           
Sbjct: 1   MNPALWISKTGLAAQDAKMNAISNNLANVNTDGFKRDRVVFEDLFYQNQRSPGSPLNQNT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  S V          VG+   T  E D A+ G  +F +E+   G+  TR G  
Sbjct: 61  ATPNGIQFGSGVKVVGTQKQFTVGNIKVTKGEFDVAIAGQGFFQIETADGGLAYTRAGNL 120

Query: 107 KVTDDGSLVSASGKY-PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
            +  DG L +A G                   +   V  +     +   +  + L +   
Sbjct: 121 SINADGVLTNAQGMPLIPQIELPAGANDLAIGKDGTVTARLGGEAEPAELGQITLVNFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +     +      +      +   ++ G LE SN   + EM  MI + + +
Sbjct: 181 PAGLEAVGGNMYKETVASGTAVEGVPGEEAFGQLEHGSLEGSNVQVVEEMVDMITVQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
                ++   +  +    + +
Sbjct: 241 EMNAKMVSAADDMLKFVTQKL 261


>gi|329929265|ref|ZP_08283018.1| flagellar hook-basal body protein [Paenibacillus sp. HGF5]
 gi|328936634|gb|EGG33077.1| flagellar hook-basal body protein [Paenibacillus sp. HGF5]
          Length = 274

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 47/271 (17%), Positives = 97/271 (35%), Gaps = 32/271 (11%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++     + +L  + +N++N +TVGF+  +V F +++    + +        
Sbjct: 1   MLRSMYSGISGMRGFQTKLDVIGNNIANVNTVGFKAGRVMFKDILSQTMSGVTPGTDDPS 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI---ILTRDG 104
                 Q    V+ G        GS ++T    D  ++GD +F ++         LTR G
Sbjct: 61  GGVNAKQIGLGVSIGSIDTLHTPGSAMTTNNPTDLRIDGDGFFMVKLSEDQEVPFLTRAG 120

Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI----ATMGL 160
            F V    +LV++ G   +           +            I +         A +G+
Sbjct: 121 DFHVDVARNLVTSDGMLVLDSAGDPIQLDEEVTAFTIAQNGAIIQKMSDGTTEEGAIIGV 180

Query: 161 YSVDMSQGFVRRENSGISPNIPPTP------------LEDLSGVTVKRGFLEDSNANSMY 208
             +   +G  +   +     +   P              +     +  G LE SN +   
Sbjct: 181 AKIPNPEGLEKIGGNMYRVTLNAVPDGDLAAVMFDGNNAEEGTGAIIAGQLEMSNVDLTG 240

Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           E  +MI   + F + + +I  +++ + E + 
Sbjct: 241 EFSEMIVAQRGFQANSRIITTSDEVLQEVVN 271


>gi|77464905|ref|YP_354409.1| flagellar basal body rod protein FlgF [Rhodobacter sphaeroides
           2.4.1]
 gi|77389323|gb|ABA80508.1| putative flagellar basal body rod protein [Rhodobacter sphaeroides
           2.4.1]
          Length = 239

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 62/242 (25%), Positives = 109/242 (45%), Gaps = 6/242 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    L  Q  L + + +VA+N++N  T GFR   + F+E V  ++ +    ++  +
Sbjct: 1   MDAAGYTTLTRQSGLMREMQSVANNIANLSTTGFRREGIVFTEHVKRLEGEASLSMASAS 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           + +  +    G    TG   DFA+ G+ +F +E+P+G  LTR G F    +G LV A G 
Sbjct: 61  ARQ--IDLTQGGLTHTGAPFDFAIMGEGFFLIETPQGQELTRAGSFTPNAEGELVDADGN 118

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
              LD  + P+ IP       +   G +S   + I  +GL+      G      +  S  
Sbjct: 119 RL-LDAGAAPLFIPPDARGVVLSADGTLSAGDQPIGRVGLWQPTDPLGLRHEGGTRFSAE 177

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
               P E     T+ +G LEDSN   + E+ +MI + + +    + +D  +  +   +R 
Sbjct: 178 GGTEPAEG---ATLVQGALEDSNVEPVSEIARMIEVQRAYEMGQSFLDREDDRIRTTVRT 234

Query: 241 IA 242
           + 
Sbjct: 235 LG 236


>gi|157376214|ref|YP_001474814.1| flagellar basal body rod protein FlgG [Shewanella sediminis
           HAW-EB3]
 gi|157318588|gb|ABV37686.1| flagellar basal-body rod protein FlgG [Shewanella sediminis
           HAW-EB3]
          Length = 262

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 42/262 (16%), Positives = 94/262 (35%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  I      A +  +S +++N++N  TVG++  +  F +++    N          
Sbjct: 1   MHPALWISKTGLDAQQTDISVISNNVANASTVGYKKSRAVFEDLLYQTVNQAGGVSASNT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                    +             G+ ++T   +D  +EG  +F ++ P G    TR+G+F
Sbjct: 61  KLPNGLNIGAGTKVVATQKVFTQGNMLTTDNSMDLMVEGPGFFEIQLPDGTAAYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE--KGEISQKGKVIATMGLYSVD 164
            + D G +V+    Y V    ++P                K   + + +V+  + +    
Sbjct: 121 TLDDTGQIVTPGSGYVVQPAITIPENATGITVSAEGEVSVKTPGTAESQVVGQLSMTDFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +  +                    +++G LE SN N   E+  +I   + 
Sbjct: 181 NPSGLDPMGQNLYTETGASGTPIQGTASLDGMGAIRQGALETSNVNVTEELVNLIESQRI 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   ++ +    +N+
Sbjct: 241 YEMNSKVISAVDQMLSYVNQNL 262


>gi|261856358|ref|YP_003263641.1| flagellar basal-body rod protein FlgG [Halothiobacillus
           neapolitanus c2]
 gi|261836827|gb|ACX96594.1| flagellar basal-body rod protein FlgG [Halothiobacillus
           neapolitanus c2]
          Length = 262

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 42/257 (16%), Positives = 90/257 (35%), Gaps = 20/257 (7%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID---------- 53
           +  I      A + R+S +++N++N +T GF+  +  F +++      +           
Sbjct: 5   ALWIAKTGLDAQQTRMSVISNNLANVNTTGFKQDRAVFEDLIYQNYRQVGAANTQQNEVP 64

Query: 54  ---QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVT 109
                 + V       +   G+ ++T   LD A+ G  +F +  P   +  TRDG F + 
Sbjct: 65  TGLNIGTGVKVVATEKNHTQGNLVTTNNALDLAINGRGFFQVLQPDGSVAYTRDGSFSLD 124

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDMSQG 168
            +G +V+A+G      +                         +   + T+ L       G
Sbjct: 125 SNGQVVTANGYPLQPAITVPQGAQSITVGKDGTVSVQLAGQAQPSQVGTIDLADFVNPAG 184

Query: 169 FVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223
                ++    +      +  +        +++G LE SN N + E+  MI   + +   
Sbjct: 185 LQPIGDNLFLESGSSGAPQTSTPGLNGVGNMQQGMLESSNVNVVEELVSMIETQRAYEMN 244

Query: 224 TTLIDENEKSMLEAIRN 240
           +  I      +    +N
Sbjct: 245 SKAISATSSMLQTLNQN 261


>gi|121601652|ref|YP_989405.1| putative flagellar basal-body rod protein FlgF [Bartonella
           bacilliformis KC583]
 gi|120613829|gb|ABM44430.1| putative flagellar basal-body rod protein FlgF [Bartonella
           bacilliformis KC583]
          Length = 244

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 76/242 (31%), Positives = 132/242 (54%), Gaps = 1/242 (0%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           MQ    +G++ Q++L +R+ T+A NM+N +T GFR   +KF  +V  I  +   ++ F +
Sbjct: 1   MQNPIYVGVSGQISLARRMETIAQNMANVNTPGFRAGGMKFDTLVSPIAQEQGDRVFFTS 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           +GK Y+S E GS   TG  LD A  G+++F++E+  G++ TRDGR  +T +G LVS +G 
Sbjct: 61  AGKGYISTERGSLEQTGNALDVAATGNSYFSMEASFGVVYTRDGRMTMTPEGMLVSVTG- 119

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
            P LD    PIQ+        +G  G I Q   +   +GLY            N+ + P+
Sbjct: 120 LPFLDDGGAPIQLNPVGGAPRIGADGSIYQGNVLAGRIGLYQFQPGTQLRYGPNASVIPD 179

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
                +E  +G  V +G++E SN N + EM ++I +++ F  +  ++ + E+   ++I+ 
Sbjct: 180 RAAIQIEGGTGDGVMQGYVESSNVNGVAEMTRLIEVSRAFERVEAMLRQQEEMRSKSIQI 239

Query: 241 IA 242
           + 
Sbjct: 240 LG 241


>gi|116328474|ref|YP_798194.1| endoflagellar distal basal body rod protein [Leptospira
           borgpetersenii serovar Hardjo-bovis L550]
 gi|116331206|ref|YP_800924.1| endoflagellar distal basal body rod protein [Leptospira
           borgpetersenii serovar Hardjo-bovis JB197]
 gi|116121218|gb|ABJ79261.1| Endoflagellar distal basal body rod protein [Leptospira
           borgpetersenii serovar Hardjo-bovis L550]
 gi|116124895|gb|ABJ76166.1| Endoflagellar distal basal body rod protein [Leptospira
           borgpetersenii serovar Hardjo-bovis JB197]
          Length = 287

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 49/285 (17%), Positives = 103/285 (36%), Gaps = 44/285 (15%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKF------------SEVVGAI 48
           M      G    +  + R+  +++N++N D   F+     F             + VG +
Sbjct: 1   MLRGMYTGANGMIIQQTRMDVISNNLANVDKTAFKRDTTVFKTFPELLLHRFDEDGVGKV 60

Query: 49  KND-------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA------WFALESP 95
                     + +        + Y   E G+   T    D  L+         +F++ + 
Sbjct: 61  PMGSFDTAPVVGKLGLGGEVNEVYTRFEQGAVKKTENPFDIMLQDRPGNEHPAFFSVMTN 120

Query: 96  RGIILTRDGRFKVTDDGSLVSASGKYPVLDMASV-----PIQIPQKDEIFNVGEKGEISQ 150
           RG  L+R G F +  +G LV+  G   + +   +        I +  E++  GE G   +
Sbjct: 121 RGERLSRSGAFVMDTNGYLVTPQGFPLMGENGPIRVARGNFLIKENGEVWINGEIGNDPR 180

Query: 151 KGKVIATMGL-----------YSVDMSQGFVRRENSGISPN---IPPTPLEDLSGVTVKR 196
            G  +                 +V+  +   +  +S  +       PTP E     ++ +
Sbjct: 181 NGTSLDKNRFETPVLLDRLKIRTVENPRHLDKEGDSFYADTPESGEPTPFELKDEPSILQ 240

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           G+LE SN + + EM +MI + + + +    +   +  + + I  +
Sbjct: 241 GYLEASNVSVVTEMVEMIEVNRSYEANQKTVQTQDSLLGKLINEV 285


>gi|304404253|ref|ZP_07385915.1| fagellar hook-basal body protein [Paenibacillus curdlanolyticus
           YK9]
 gi|304347231|gb|EFM13063.1| fagellar hook-basal body protein [Paenibacillus curdlanolyticus
           YK9]
          Length = 272

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 49/269 (18%), Positives = 97/269 (36%), Gaps = 30/269 (11%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++     + +L  + +N++N +TVGF+  +V F +++      +        
Sbjct: 1   MLRSMYSGVSGMRGFQTKLDVIGNNIANVNTVGFKAGRVMFKDILSQNVAGVTAPEEGAK 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI---ILTRDG 104
                 Q    VA          GS ++T    D  ++GD +FA+++        LTR G
Sbjct: 61  GGVNAKQVGLGVAIAAIDTLHTAGSAMTTNVPTDVRIDGDGFFAVKTSPEQEVPYLTRAG 120

Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM-----G 159
            F +     LV+A G + + +     +            +   IS      A       G
Sbjct: 121 NFYLDASRQLVTADGAFVLAEGGEPIVLDEGVTSFSIAQDGSIISINADGTAEPTDFKIG 180

Query: 160 LYSVDMSQGFVRRENSGISPN---------IPPTPLEDLSGVTVKRGFLEDSNANSMYEM 210
           +  V    G  +  ++              +      +     +  G LE SN +   E 
Sbjct: 181 VVKVVNPSGLEKVGSNMYRVTPNANLEDIEVGSANNAETGTGAIIAGQLEMSNVDLTSEF 240

Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +MI   + F + + +I  +++ + E + 
Sbjct: 241 TEMIIAQRGFQANSRIITTSDEVLQEVVN 269


>gi|170725957|ref|YP_001759983.1| flagellar basal body rod protein FlgG [Shewanella woodyi ATCC
           51908]
 gi|169811304|gb|ACA85888.1| flagellar basal-body rod protein FlgG [Shewanella woodyi ATCC
           51908]
          Length = 262

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 43/262 (16%), Positives = 95/262 (36%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  I      A +  +S +++N++N  TVG++  +  F +++    N          
Sbjct: 1   MHPALWISKTGLDAQQTDISVISNNVANASTVGYKKSRAVFEDLLYQTVNQAGGVSASNT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                    +             G+ ++T   LD  +EG  +F ++ P G    TR+G+F
Sbjct: 61  KLPNGLNVGAGTKVVATQKVFTQGNMLTTDNSLDLMVEGPGFFEIQLPDGTAAYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI--SQKGKVIATMGLYSVD 164
            + D G +V++   Y V    ++P                +   + + +V+  + +    
Sbjct: 121 TLDDTGQIVTSGSGYVVQPAITIPENATGITVSAEGEVSVKTAGTAESQVVGQLTMSDFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +  +                    V++G LE SN N   E+  +I   + 
Sbjct: 181 NPSGLDPMGQNLYTETGASGTPIQGTASLDGMGAVRQGALETSNVNVTEELVNLIESQRI 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   ++ +    +N+
Sbjct: 241 YEMNSKVISAVDQMLSYVNQNL 262


>gi|309388845|gb|ADO76725.1| flagellar basal-body rod protein FlgF [Halanaerobium praevalens DSM
           2228]
          Length = 250

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 56/251 (22%), Positives = 103/251 (41%), Gaps = 12/251 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGA------IKND 51
           M        ++   LE++ +  ++N++N +T GF+  +     F E++ +          
Sbjct: 1   MIRGLYTAASSMGVLEKKTNIRSNNLANVNTNGFKKSEAITASFPEMLLSKIEADKADQQ 60

Query: 52  IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDD 111
           I    +     + +     G F  T   LDFA+EG  +F +E+  G   +RDG F +  D
Sbjct: 61  IGSLATGAYLERSFKDMSQGDFKRTDNALDFAIEGSGFFVIETENGEKYSRDGNFTINAD 120

Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171
             L++ SG    LD     IQI    +     E       G   A +GL   +      +
Sbjct: 121 SELITQSGNNV-LDSNGNRIQIIPDQDFRVSAEGQITFNNGLQGAQIGLVDFENEAELAQ 179

Query: 172 RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
             ++         P+   S   + +G++E SN   + EM +MI  T+ + S   +I   +
Sbjct: 180 TGDNLYELQGETEPI--ASQAGIAQGYVEGSNVQIVEEMAKMIKTTRHYESNQKVISSID 237

Query: 232 KSMLEAIRNIA 242
           +S+ + I  + 
Sbjct: 238 ESLNKVINEVG 248


>gi|90408062|ref|ZP_01216233.1| Flagellar basal body rod protein FlgG [Psychromonas sp. CNPT3]
 gi|90310819|gb|EAS38933.1| Flagellar basal body rod protein FlgG [Psychromonas sp. CNPT3]
          Length = 262

 Score =  160 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 42/262 (16%), Positives = 97/262 (37%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +  I      A +  ++T+++N++N  TVGF+  +  F +++    N          
Sbjct: 1   MHPALWISKTGLDAQQTNVATISNNLANASTVGFKKSRAIFEDLLYQNINQPGANATQNT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                    +         +   G+ ++T   LD  ++G  +F +E P G    TR+G+F
Sbjct: 61  KLPSGLMIGAGAKVVAVQKNFSQGNALTTKNSLDIMIDGRGFFEIEMPDGSSGYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQI--PQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
           ++ +DG +V+    Y ++    +P             V  +     + +V+  + +    
Sbjct: 121 QLNEDGIIVTPGSGYALMPQIQIPNDALSISVGSEGEVSVRIAGQVENQVVGQINVNDFV 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +  +                    +++G LE SN N   E+  +I   + 
Sbjct: 181 NPSGLEPMGENLYTETGASGAPIQGVPGGDGLGFLRQGMLETSNVNVTEELVNLIESQRV 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   ++ +    + +
Sbjct: 241 YEMNSKVISAVDEMLSYVSQQL 262


>gi|294140187|ref|YP_003556165.1| flagellar basal-body rod protein FlgG [Shewanella violacea DSS12]
 gi|293326656|dbj|BAJ01387.1| flagellar basal-body rod protein FlgG [Shewanella violacea DSS12]
          Length = 262

 Score =  160 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 42/262 (16%), Positives = 94/262 (35%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  I      A +  +S +++N++N  T+G++  +  F +++    N          
Sbjct: 1   MHPALWISKTGLDAQQTDISVISNNVANASTIGYKKSRAVFEDLLYQTVNQAGGISASNT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                    +             G+ ++T   LD  +EG  +F ++ P G    TR+G+F
Sbjct: 61  KLPNGLNIGAGTKVVATQKVFTQGNMLTTDNSLDMMIEGPGFFEIQLPDGTAAYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE--KGEISQKGKVIATMGLYSVD 164
            + D G +V++   Y V    ++P                K   + + +V+  + +    
Sbjct: 121 TLDDTGQMVTSGSGYVVQPAITIPDNATSITVSAEGEVSVKTPGTIENQVVGQLSMSDFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +                       +++G LE SN N   E+  +I   + 
Sbjct: 181 NPSGLDPMGQNLYLETGASGTPIQGTASLDGMGAIRQGALETSNVNVTEELVNLIESQRI 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   ++ +    +N+
Sbjct: 241 YEMNSKVISAVDQMLSYVNQNL 262


>gi|260574402|ref|ZP_05842406.1| flagellar basal-body rod protein FlgF [Rhodobacter sp. SW2]
 gi|259023298|gb|EEW26590.1| flagellar basal-body rod protein FlgF [Rhodobacter sp. SW2]
          Length = 236

 Score =  160 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 63/242 (26%), Positives = 113/242 (46%), Gaps = 7/242 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    L  Q  L + +  VA+N++N  T GFR   V F+E V  +  D +  +S   
Sbjct: 1   MDAAGYTTLTRQSGLMREMQVVANNIANISTTGFRREGVVFAEYVKRM--DGEPSLSMAH 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           +    +     S   TG   DFA++GD +F +E+P+G  LTR G F  + +G LV+  G 
Sbjct: 59  ATARNIDLGQASISQTGGAFDFAIQGDGFFLIETPQGQRLTRAGSFTPSAEGELVNPDG- 117

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
           + +LD    PI +P    +  + E G +S  G+ +A +GL+          +  +     
Sbjct: 118 FRLLDQGGAPIFVPPDAGVVGMSEDGTLSAGGQPLARVGLWQPTDPNTLRHQGGTLFEAG 177

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
                +E +    + +G++EDSN N + E+ +MI + + +      +D  +  +   I+ 
Sbjct: 178 A----MEPVEDGQILQGYIEDSNVNPISEIARMIEVQRAYELGQKFLDNEDARVRGVIQT 233

Query: 241 IA 242
           + 
Sbjct: 234 LG 235


>gi|89072313|ref|ZP_01158892.1| putative flagellar basal-body rod protein [Photobacterium sp.
           SKA34]
 gi|89051845|gb|EAR57297.1| putative flagellar basal-body rod protein [Photobacterium sp.
           SKA34]
          Length = 261

 Score =  160 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 44/261 (16%), Positives = 97/261 (37%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M ++  +      A + +++ +++N++N +TVGF+  +V F ++  +I+           
Sbjct: 1   MHSALWVSKTGMAAQDTKMTAISNNLANVNTVGFKRDRVVFEDLFYSIQRQPGAQVDQLN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  S V           G+  +T  +LD A+ G  +F +E+  G  + +R+G+F
Sbjct: 61  QLPSGVQLGSGVRVVGTQKVFTQGNSQNTQQQLDLAVMGSGFFQIENSDGEVMFSRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165
            V  +G +V+  G      +            +  +         + + +  + L     
Sbjct: 121 HVNSEGLMVNGQGLPLQPQIQIPEEANTISIGVDGIVTATLAGDPQPQELGQITLAKFIN 180

Query: 166 SQGFVRRENSGI-SPNIPPTPLED----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +          P E         ++K+G LE SN   + EM  MI   + +
Sbjct: 181 PAGLEAVGGNLYKETQASGQPQEMIAGIDGAGSLKQGALEGSNVQVVEEMVDMITTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
                ++   +  +    + +
Sbjct: 241 EMNAKVVSAADDMLKFVAQAV 261


>gi|83716996|ref|YP_438391.1| flagellar basal body rod protein FlgG [Burkholderia thailandensis
           E264]
 gi|167614839|ref|ZP_02383474.1| flagellar basal body rod protein FlgG [Burkholderia thailandensis
           Bt4]
 gi|257141424|ref|ZP_05589686.1| flagellar basal body rod protein FlgG [Burkholderia thailandensis
           E264]
 gi|83650821|gb|ABC34885.1| flagellar basal-body rod protein FlgG [Burkholderia thailandensis
           E264]
          Length = 262

 Score =  160 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 48/259 (18%), Positives = 94/259 (36%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  I      A + +L  +A+N++N +T+GF+  +V F ++   I+           
Sbjct: 1   MNQAMWISKTGLQAQDAKLQAIANNLANVNTIGFKRDRVVFEDLFYRIERQPGAQLDQDN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                 Q  S             GS  +TG  LD A+ G  +  +    G    TR G+ 
Sbjct: 61  ASPSGIQMGSGTRIVGTQKIFTDGSVQTTGQSLDVAVMGKGFIQVLMANGETGYTRAGQL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
            +  +G LV+A G     +++           E   V      +     +  + L +   
Sbjct: 121 SINAEGLLVNAQGLPLQPEISIPENATDIAIGENGIVAATMPGASSPSEVGQIQLANFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G +   ++     +   P  +    T     +K+G LE +N   + EM  MI   + +
Sbjct: 181 PAGLLALGDNLYMETVASGPPNEGEPGTDVFGKIKQGALEGANVQVVEEMVDMIAAQRTY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              T ++   +  + +  +
Sbjct: 241 EMNTKVLSAADNMLQQLSQ 259


>gi|304397206|ref|ZP_07379085.1| flagellar basal-body rod protein FlgG [Pantoea sp. aB]
 gi|308186395|ref|YP_003930526.1| Flagellar basal-body rod protein flgG [Pantoea vagans C9-1]
 gi|304355355|gb|EFM19723.1| flagellar basal-body rod protein FlgG [Pantoea sp. aB]
 gi|308056905|gb|ADO09077.1| Flagellar basal-body rod protein flgG [Pantoea vagans C9-1]
          Length = 260

 Score =  160 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 86/259 (33%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S  I      A +  +  +A+N++N  T GF+  +  F +++         +     
Sbjct: 1   MIRSLWIAKTGLDAQQMNMDVIANNLANVSTNGFKRSRAVFEDLMYQTMRQPGTQSSEQT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                    + V           G+   T    D A+ G  +F ++ P G    TRDG F
Sbjct: 61  TLPSGLQIGTGVRPVTTERLHTQGNLSQTSNSKDIAINGQGYFQIQMPDGTSAYTRDGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V  +G LV+ SG      +                V    +   +   +  + L +   
Sbjct: 121 QVDQNGQLVTNSGFPVQPGITIPANATSITVSRDGVVSVTQQGQAQAAQVGQLTLSTFMN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +            D +        + +G+ E SN N   E+  MI   + +
Sbjct: 181 DAGLDSVGENLYKETQASGAPTDSTPGQNGAGLLYQGYTETSNVNVAEELVTMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  I  +++ + +  +
Sbjct: 241 EINSKAISTSDQMLAKLTQ 259


>gi|188582487|ref|YP_001925932.1| flagellar basal body rod protein FlgF [Methylobacterium populi
           BJ001]
 gi|179345985|gb|ACB81397.1| flagellar basal body rod protein [Methylobacterium populi BJ001]
          Length = 246

 Score =  160 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 62/247 (25%), Positives = 117/247 (47%), Gaps = 9/247 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN-----DIDQK 55
           MQ +  +G++AQ AL + L  +A+NM+N  T GF+    +F E +  + +       D++
Sbjct: 1   MQNALFVGVSAQAALARELDVIANNMANVSTTGFKARSARFQEYLMPVASADSFQRSDRR 60

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115
           +S+V      L    G     G  +  AL GDA+ A+++P+G+  TR+G F++   G+LV
Sbjct: 61  LSYVIDQGTPLDLTQGPVEPDGNPMHVALRGDAFLAVQTPQGVRYTRNGAFELNAQGNLV 120

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
           ++ G     D    PI I Q++   ++   G +S    +   + L +    Q       +
Sbjct: 121 TSDGYAVQGD--GGPITIGQQETGLSIAPDGTVSTNLGIRGRLRLVTFANPQALKSEGAN 178

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
             S + P           ++ G LE SN   + EM +++ + + +  ++++I   +    
Sbjct: 179 LFSSDAPARAAGPGQH--LEPGALERSNVKPVVEMTRLMDVNRTYTMVSSVISRLDDLRG 236

Query: 236 EAIRNIA 242
            AIR +A
Sbjct: 237 TAIRRLA 243


>gi|126463747|ref|YP_001044861.1| flagellar basal body rod protein FlgF [Rhodobacter sphaeroides ATCC
           17029]
 gi|126105411|gb|ABN78089.1| protein of unknown function DUF1078 domain protein [Rhodobacter
           sphaeroides ATCC 17029]
          Length = 239

 Score =  160 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 62/242 (25%), Positives = 109/242 (45%), Gaps = 6/242 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    L  Q  L + + +VA+N++N  T GFR   + F+E V  ++ +    ++  +
Sbjct: 1   MDAAGYTTLTRQSGLMREMQSVANNIANISTTGFRREGIVFTEHVKRLEGEASLSMASAS 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           + +  +    G    TG   DFA+ G+ +F +E+P+G  LTR G F    +G LV A G 
Sbjct: 61  ARQ--IDLTQGGLTRTGAPFDFAIMGEGFFLIETPQGQELTRAGSFTPNAEGELVDADGN 118

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
              LD  + P+ IP       +   G +S   + I  +GL+      G      +  S  
Sbjct: 119 RL-LDAGAAPLFIPPDARGVVLSADGTLSAGDQPIGRVGLWQPTDPLGLRHEGGTRFSAE 177

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
               P E     T+ +G LEDSN   + E+ +MI + + +    + +D  +  +   +R 
Sbjct: 178 GGTEPAEG---ATLVQGALEDSNVEPVSEIARMIDVQRAYEMGQSFLDREDDRIRTTVRT 234

Query: 241 IA 242
           + 
Sbjct: 235 LG 236


>gi|297530598|ref|YP_003671873.1| fagellar hook-basal body protein [Geobacillus sp. C56-T3]
 gi|297253850|gb|ADI27296.1| fagellar hook-basal body protein [Geobacillus sp. C56-T3]
          Length = 288

 Score =  160 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 50/285 (17%), Positives = 95/285 (33%), Gaps = 46/285 (16%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G+ A    + +L  + +N++N +T GF+  +  F +++    +          
Sbjct: 1   MLRSMYSGIGAMRNFQTKLDVIGNNIANVNTYGFKKGRTIFKDLMSQTISGASGPNAGAG 60

Query: 54  -------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-----IILT 101
                  Q                GS  +TG  LD A+ GD +F L           + T
Sbjct: 61  RGGTNPKQVGLGSQLAAIDTVHTQGSLQTTGRVLDLAISGDGFFILGELNNGNLINPLFT 120

Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVG-------------EKGEI 148
           R G F +  +G +V+A G Y V +         ++  I                    + 
Sbjct: 121 RAGNFYLDKEGYIVNADGLYLVGEGYQNGAFTGKRARIQIPTDAKSVSIGADGVVNYVDA 180

Query: 149 SQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP--------------TPLEDLSGVTV 194
               +V   + L     + G  +   +                       P ++    ++
Sbjct: 181 VGNLQVAGRIRLAKFPNNDGLEKVGGNLFRETANSGTIINPNNQNEWIAYPPQESGAGSI 240

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             G LE SN +   E  +MI   + F + T +I  +++ + E + 
Sbjct: 241 VSGALEMSNVDLAEEFTEMIVAQRGFQANTRIITTSDEILQELVN 285


>gi|268589980|ref|ZP_06124201.1| flagellar basal-body rod protein FlgG [Providencia rettgeri DSM
           1131]
 gi|291314698|gb|EFE55151.1| flagellar basal-body rod protein FlgG [Providencia rettgeri DSM
           1131]
          Length = 260

 Score =  160 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 84/259 (32%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A +  L  +++N++N  T GF+  +  F +++               
Sbjct: 1   MIRSLWIAKTGLDAQQTNLDVISNNLANVSTNGFKRQRAVFEDLMYQNIRQPGAMSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  +             G+   TG   D A+ G  +  ++ P G    TRDG  
Sbjct: 61  SLPSGLQMGTGSRPVATMRIHAQGALNKTGNTNDIAIRGQGFLHVQMPDGTDAYTRDGAL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +   DG LV++SG   V  +                V        + + I  + L +   
Sbjct: 121 QPNQDGQLVTSSGYQIVPAIMIPDNANSLSIARDGTVTITVYGDNQPQQIGQITLTTFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +            + +  T     + +  LE SN N   E+  MI   + +
Sbjct: 181 DAGLESMGENLYMETASSGAPNESAPGTNGAGLLYQNMLETSNVNVAEELVNMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +  +++ +    +
Sbjct: 241 EINSKAVSASDQMLQRLTQ 259


>gi|114562344|ref|YP_749857.1| flagellar basal body rod protein FlgG [Shewanella frigidimarina
           NCIMB 400]
 gi|114333637|gb|ABI71019.1| flagellar basal-body rod protein FlgG [Shewanella frigidimarina
           NCIMB 400]
          Length = 262

 Score =  160 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 44/262 (16%), Positives = 95/262 (36%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  I      A +  ++ +++N++N  TVGF+  +  F +++    N          
Sbjct: 1   MHPALWISKTGVDAQQTNIAVISNNVANASTVGFKKSRAVFEDLLYQTVNQAGGISSDNS 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                    +             G+ ++T   LD  +EG  +F ++ P G    TR+G+F
Sbjct: 61  KLPNGLNIGAGTKVVATQKMFTQGNMLTTDNSLDLMIEGSGFFEVQMPDGTAAYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF--NVGEKGEISQKGKVIATMGLYSVD 164
            + D G +V+    Y V    ++P             V  +   +   +VI  + +    
Sbjct: 121 SLDDTGQIVTPGSGYVVQPPITIPDDSTSITVSASGEVSVQTPGTAASQVIGQLTMTDFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +  +                   ++++G LE SN N   E+  +I   + 
Sbjct: 181 NPAGLDPLGQNLYTETGASGTPIQGTASLDGLGSIRQGALETSNVNVTEELVNLIQGQRI 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   ++ +    +N+
Sbjct: 241 YEMNSKVISAVDQMLSYINQNL 262


>gi|15642194|ref|NP_231826.1| flagellar basal body rod protein FlgG [Vibrio cholerae O1 biovar El
           Tor str. N16961]
 gi|121586257|ref|ZP_01676047.1| flagellar basal-body rod protein FlgG [Vibrio cholerae 2740-80]
 gi|121726538|ref|ZP_01679787.1| flagellar basal-body rod protein FlgG [Vibrio cholerae V52]
 gi|147674573|ref|YP_001217712.1| flagellar basal body rod protein FlgG [Vibrio cholerae O395]
 gi|153213600|ref|ZP_01948873.1| flagellar basal-body rod protein FlgG [Vibrio cholerae 1587]
 gi|153817095|ref|ZP_01969762.1| flagellar basal-body rod protein FlgG [Vibrio cholerae NCTC 8457]
 gi|153820850|ref|ZP_01973517.1| flagellar basal-body rod protein FlgG [Vibrio cholerae B33]
 gi|153825330|ref|ZP_01977997.1| flagellar basal-body rod protein FlgG [Vibrio cholerae MZO-2]
 gi|153829351|ref|ZP_01982018.1| flagellar basal-body rod protein FlgG [Vibrio cholerae 623-39]
 gi|183179567|ref|ZP_02957778.1| flagellar basal-body rod protein FlgG [Vibrio cholerae MZO-3]
 gi|227082319|ref|YP_002810870.1| flagellar basal-body rod protein FlgG [Vibrio cholerae M66-2]
 gi|229507728|ref|ZP_04397233.1| flagellar basal-body rod protein FlgG [Vibrio cholerae BX 330286]
 gi|229512077|ref|ZP_04401556.1| flagellar basal-body rod protein FlgG [Vibrio cholerae B33]
 gi|229513839|ref|ZP_04403301.1| flagellar basal-body rod protein FlgG [Vibrio cholerae TMA 21]
 gi|229519213|ref|ZP_04408656.1| flagellar basal-body rod protein FlgG [Vibrio cholerae RC9]
 gi|229522144|ref|ZP_04411561.1| flagellar basal-body rod protein FlgG [Vibrio cholerae TM 11079-80]
 gi|229524190|ref|ZP_04413595.1| flagellar basal-body rod protein FlgG [Vibrio cholerae bv. albensis
           VL426]
 gi|229528800|ref|ZP_04418190.1| flagellar basal-body rod protein FlgG [Vibrio cholerae 12129(1)]
 gi|229607232|ref|YP_002877880.1| flagellar basal body rod protein FlgG [Vibrio cholerae MJ-1236]
 gi|254225803|ref|ZP_04919408.1| flagellar basal-body rod protein FlgG [Vibrio cholerae V51]
 gi|254849324|ref|ZP_05238674.1| flagellar basal-body rod protein FlgG [Vibrio cholerae MO10]
 gi|255747106|ref|ZP_05421051.1| flagellar basal-body rod protein FlgG [Vibrio cholera CIRS 101]
 gi|262161350|ref|ZP_06030460.1| flagellar basal-body rod protein FlgG [Vibrio cholerae INDRE 91/1]
 gi|262167779|ref|ZP_06035481.1| flagellar basal-body rod protein FlgG [Vibrio cholerae RC27]
 gi|262191687|ref|ZP_06049863.1| flagellar basal-body rod protein FlgG [Vibrio cholerae CT 5369-93]
 gi|297580841|ref|ZP_06942766.1| flagellar basal-body rod protein FlgG [Vibrio cholerae RC385]
 gi|298500427|ref|ZP_07010232.1| flagellar basal-body rod protein FlgG [Vibrio cholerae MAK 757]
 gi|9656751|gb|AAF95340.1| flagellar basal-body rod protein FlgG [Vibrio cholerae O1 biovar El
           Tor str. N16961]
 gi|121549523|gb|EAX59549.1| flagellar basal-body rod protein FlgG [Vibrio cholerae 2740-80]
 gi|121630991|gb|EAX63370.1| flagellar basal-body rod protein FlgG [Vibrio cholerae V52]
 gi|124115799|gb|EAY34619.1| flagellar basal-body rod protein FlgG [Vibrio cholerae 1587]
 gi|125621709|gb|EAZ50038.1| flagellar basal-body rod protein FlgG [Vibrio cholerae V51]
 gi|126512363|gb|EAZ74957.1| flagellar basal-body rod protein FlgG [Vibrio cholerae NCTC 8457]
 gi|126521642|gb|EAZ78865.1| flagellar basal-body rod protein FlgG [Vibrio cholerae B33]
 gi|146316456|gb|ABQ20995.1| flagellar basal-body rod protein FlgG [Vibrio cholerae O395]
 gi|148875192|gb|EDL73327.1| flagellar basal-body rod protein FlgG [Vibrio cholerae 623-39]
 gi|149741014|gb|EDM55083.1| flagellar basal-body rod protein FlgG [Vibrio cholerae MZO-2]
 gi|183012978|gb|EDT88278.1| flagellar basal-body rod protein FlgG [Vibrio cholerae MZO-3]
 gi|227010207|gb|ACP06419.1| flagellar basal-body rod protein FlgG [Vibrio cholerae M66-2]
 gi|227014091|gb|ACP10301.1| flagellar basal-body rod protein FlgG [Vibrio cholerae O395]
 gi|229332574|gb|EEN98060.1| flagellar basal-body rod protein FlgG [Vibrio cholerae 12129(1)]
 gi|229337771|gb|EEO02788.1| flagellar basal-body rod protein FlgG [Vibrio cholerae bv. albensis
           VL426]
 gi|229341069|gb|EEO06074.1| flagellar basal-body rod protein FlgG [Vibrio cholerae TM 11079-80]
 gi|229343902|gb|EEO08877.1| flagellar basal-body rod protein FlgG [Vibrio cholerae RC9]
 gi|229349020|gb|EEO13977.1| flagellar basal-body rod protein FlgG [Vibrio cholerae TMA 21]
 gi|229352042|gb|EEO16983.1| flagellar basal-body rod protein FlgG [Vibrio cholerae B33]
 gi|229355233|gb|EEO20154.1| flagellar basal-body rod protein FlgG [Vibrio cholerae BX 330286]
 gi|229369887|gb|ACQ60310.1| flagellar basal-body rod protein FlgG [Vibrio cholerae MJ-1236]
 gi|254845029|gb|EET23443.1| flagellar basal-body rod protein FlgG [Vibrio cholerae MO10]
 gi|255735508|gb|EET90908.1| flagellar basal-body rod protein FlgG [Vibrio cholera CIRS 101]
 gi|262023844|gb|EEY42543.1| flagellar basal-body rod protein FlgG [Vibrio cholerae RC27]
 gi|262028661|gb|EEY47315.1| flagellar basal-body rod protein FlgG [Vibrio cholerae INDRE 91/1]
 gi|262032426|gb|EEY50988.1| flagellar basal-body rod protein FlgG [Vibrio cholerae CT 5369-93]
 gi|297534667|gb|EFH73503.1| flagellar basal-body rod protein FlgG [Vibrio cholerae RC385]
 gi|297541120|gb|EFH77174.1| flagellar basal-body rod protein FlgG [Vibrio cholerae MAK 757]
 gi|327484714|gb|AEA79121.1| Flagellar basal-body rod protein FlgG [Vibrio cholerae LMA3894-4]
          Length = 262

 Score =  160 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 45/262 (17%), Positives = 96/262 (36%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           MQ +  +      A +  ++T+++N++N  T+GF+  +  F ++     N    +     
Sbjct: 1   MQPALWVSKTGLDAQQTNIATISNNLANASTIGFKKGRAVFEDLFYQNINQPGAQSSQNT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    +             G+  +T   LD  +EGD +F +  P   I  +R+G+F
Sbjct: 61  RLPSGLMLGAGSKVVATQKVHTNGNVQTTSNSLDMMIEGDGFFQILMPDGNIAYSRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD--EIFNVGEKGEISQKGKVIATMGLYSVD 164
            + D+G++V++   Y +     +P             V  +    Q  +V+  +      
Sbjct: 121 TLDDEGAIVTSGAGYRLQPEIIIPEDAISITIGNDGEVSVRVRGQQDNQVLGQITTVDFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +   P       ++          +++  LE SN N   E+  MI   + 
Sbjct: 181 NPGGLEPVGQNLYLPTGASGEPQEGVPGLDGLGDIRQSMLETSNVNVTEELVNMIEAQRV 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   +K M    + +
Sbjct: 241 YEMNSKVISAVDKMMSFVNQQL 262


>gi|68164544|gb|AAY87273.1| predicted flagellar basal body rod protein [uncultured bacterium
           BAC17H8]
          Length = 262

 Score =  160 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 93/259 (35%), Gaps = 20/259 (7%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------- 55
           +S ++      A + R+  +A+N++N +T GF+  +  F  ++  ++     +       
Sbjct: 4   SSMHVAKTGLNAQQTRMQIIANNLANVNTTGFKRDRANFETLLYQVRRVAGDQVTAEANL 63

Query: 56  ------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKV 108
                  +         +   GS I+T   LD ALEG  +F +  P   +  TR+G F  
Sbjct: 64  TSSFSVGTGARIVNTQKAHTQGSLITTDNSLDLALEGGGFFQVLLPDGRVGYTRNGAFST 123

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG-KVIATMGLYSVDMSQ 167
             +G L ++SG     ++A              +         G + +  + +       
Sbjct: 124 NSEGVLTTSSGYVLQPEIALPDGVSQINISRDGIVSVLVAGGIGAEAVGQLQIADFTNRG 183

Query: 168 GFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222
           G      S              +        V +G LE SN N + E+ +MI   + +  
Sbjct: 184 GLQPIGESFYVETDTSGAPIVGNPQDAGLGRVIQGALESSNVNVVTELVEMIETQRAYEV 243

Query: 223 ITTLIDENEKSMLEAIRNI 241
            +  I   ++ +    +N+
Sbjct: 244 SSKSITSVDEMLRYISQNL 262


>gi|323490149|ref|ZP_08095369.1| fagellar hook-basal body protein [Planococcus donghaensis MPA1U2]
 gi|323396197|gb|EGA89023.1| fagellar hook-basal body protein [Planococcus donghaensis MPA1U2]
          Length = 255

 Score =  160 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 57/252 (22%), Positives = 106/252 (42%), Gaps = 13/252 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  S   G++     + +L  + +N++N +T+G++   + F +++    ++       V 
Sbjct: 1   MLRSMYSGVSGMKNFQTKLDVIGNNIANVNTIGYKKSTINFQDLLSQNMSNSGTNPMQVG 60

Query: 61  SGKEY----LSKEVGSFISTGTELDFALEGDAWFALESP-----RGIILTRDGRFKVTDD 111
            G       ++   GS +STG E D A+ G+ +F ++ P      G  LTR G F VT  
Sbjct: 61  LGTTTSAINVNHNPGSVMSTGIETDLAIMGNGFFVVQDPEAPGADGQFLTRSGSFSVTTA 120

Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG---EISQKGKVIATMGLYSVDMSQG 168
           G+LVSA G   +    +            N   +    +       IA +G+ + +  +G
Sbjct: 121 GNLVSAQGYNVLNSAGAPINVAGYDSFSINRSGEVVGRQADGTETTIAFVGISNPENPEG 180

Query: 169 FVRRENSGIS-PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
             +   S    P   PT    L+   +  G LE SN +   E  +MI   + F + +  I
Sbjct: 181 LKKVGGSMYEVPPNTPTQTAALANTEIGSGMLEMSNVDLTEEFTEMIIAQRGFQANSRTI 240

Query: 228 DENEKSMLEAIR 239
             +++ + E + 
Sbjct: 241 TTSDEILQEVMN 252


>gi|332187904|ref|ZP_08389637.1| flagellar basal-body rod protein FlgG [Sphingomonas sp. S17]
 gi|332012065|gb|EGI54137.1| flagellar basal-body rod protein FlgG [Sphingomonas sp. S17]
          Length = 262

 Score =  160 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 43/258 (16%), Positives = 95/258 (36%), Gaps = 20/258 (7%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK-------- 55
           + +I      A + R+  +++N++N +T GF+  +  F  +                   
Sbjct: 5   AMHIARTGLDAQDMRMRVISNNLANVNTTGFKRDRAAFETLAYQTITAPGAASSTESKYA 64

Query: 56  -----ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVT 109
                 + V           G+  +T   LD AL+G+ +F ++ P G +  TR G F  +
Sbjct: 65  TGLNLGTGVRIQGTARINTQGAMQTTNNSLDMALDGEGFFQVQMPGGTLGYTRAGNFSRS 124

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDMSQG 168
            +G LV++ G   +  +                V    +       I  + + +     G
Sbjct: 125 AEGLLVTSEGYQVMPGITVPEGATQITIGTDGTVSATIQGQTAPAEIGQIQIATFPNPAG 184

Query: 169 FVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223
              + ++ ++       +            +++G LE SN N + E+  MI   + +   
Sbjct: 185 LQSKGDNYLTETAASGAVNMGVAGLEGRGQIRQGMLEGSNVNVVEELVDMIETQRAYEVN 244

Query: 224 TTLIDENEKSMLEAIRNI 241
           + +I   ++ +  A +N+
Sbjct: 245 SKMIKSTDEMLQYANQNL 262


>gi|326386932|ref|ZP_08208546.1| flagellar basal body rod protein FlgG [Novosphingobium
           nitrogenifigens DSM 19370]
 gi|326208612|gb|EGD59415.1| flagellar basal body rod protein FlgG [Novosphingobium
           nitrogenifigens DSM 19370]
          Length = 262

 Score =  160 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 48/259 (18%), Positives = 95/259 (36%), Gaps = 20/259 (7%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------- 55
           ++  +      A + R+  +A+N++N  T GF+  +  F+ +          +       
Sbjct: 4   SALYVARTGLEAQDTRMRVIANNLANVSTTGFKRDRANFASLAYQDARVAGAQSSNETTY 63

Query: 56  ------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKV 108
                  + V           GS  STG  LD AL+GD +F +  P G +  TR G F  
Sbjct: 64  ATGLNLGTGVGIQSTTPDMTEGSLQSTGNALDLALDGDGYFQISMPGGQLSYTRAGNFTR 123

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           + +G LV++ G      +            +   V      S +   I  + + S     
Sbjct: 124 SPEGLLVTSQGYALQPQITIPEGATGITVAQDGTVSATLPGSSQATSIGQITIASFTNPA 183

Query: 168 GFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222
                 ++  +      P++           V++GFLE SN + + E+  MI   + +  
Sbjct: 184 ALKAIGDNFYTETTGSGPVQLGIAGQNGRGNVRQGFLEASNVSVVSELVDMIECQRAYEI 243

Query: 223 ITTLIDENEKSMLEAIRNI 241
            + ++   +  +  A + +
Sbjct: 244 NSKMVSAVDDMLKNANQTL 262


>gi|159045792|ref|YP_001534586.1| flagellar basal body rod protein FlgG [Dinoroseobacter shibae DFL
           12]
 gi|157913552|gb|ABV94985.1| flagellar basal-body rod protein FlgG [Dinoroseobacter shibae DFL
           12]
          Length = 261

 Score =  160 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 41/255 (16%), Positives = 98/255 (38%), Gaps = 21/255 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             +  I      A + R+  +++N++N +T G+   + +F+++                 
Sbjct: 1   MRALTIAATGMSAQQMRVEVISNNLANMNTTGYNARRAEFADLHYQQVKAPGTINASDGT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q    V +    +    GS   TG +LD A+EG  +  +  P      TRDG  
Sbjct: 61  ALPTGVQLGLGVRAAAVTVELSQGSLSQTGGDLDLAIEGKGYLEVTLPSGASAYTRDGSL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           K + +G +V++ G   V ++      +    +    V      + + +++    L     
Sbjct: 121 KRSAEGLIVTSDGYPVVPEIVIPEGTMRISVDAEGEVYAYFRDTVEPELLGQFSLAGFTN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
           ++G     ++    +    P            T ++G+LE S+ +++ E+ ++I   + +
Sbjct: 181 AKGLEAIGSNLFMESNASGPPLIGVPGEDGLGTFRQGYLEASSVDAVREVTELIEAQRGY 240

Query: 221 NSITTLIDENEKSML 235
              + ++   ++ M 
Sbjct: 241 ELNSKVMTAADQMMG 255


>gi|148976396|ref|ZP_01813102.1| flagellar basal body rod protein FlgG [Vibrionales bacterium
           SWAT-3]
 gi|145964219|gb|EDK29475.1| flagellar basal body rod protein FlgG [Vibrionales bacterium
           SWAT-3]
          Length = 262

 Score =  160 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 46/262 (17%), Positives = 95/262 (36%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +  +      A +  +ST+++N++N  T+GF+  +  F ++     N    +     
Sbjct: 1   MHPALWVSKTGLDAQQTNISTISNNLANASTIGFKKSRAVFEDLFYQNINQPGGQSSQNT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                    +             G+  +T   LD  +EGD +F +E P G    +R+G+F
Sbjct: 61  ELPSGLMLGAGSKVVATQKVHTHGNAQTTSNSLDMMIEGDGFFQVEMPDGETGYSRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG--EISQKGKVIATMGLYSVD 164
            +  DG++V++   YP+     +P          +          Q   V+  + +    
Sbjct: 121 TLNGDGAIVTSGQGYPLQPEIVIPEDAISVTVGNDGEVSVRLRGEQNNVVVGQITITDFV 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +   P       ++          +++  LE SN N   E+  MI   + 
Sbjct: 181 NPGGLEPVGQNLYLPTGASGDPQEGVPGFDGLGNIRQSMLETSNVNVTEELVNMIEAQRV 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   +K M    + +
Sbjct: 241 YEMNSKVISSVDKMMSFVNQQL 262


>gi|90577346|ref|ZP_01233157.1| putative flagellar basal-body rod protein [Vibrio angustum S14]
 gi|90440432|gb|EAS65612.1| putative flagellar basal-body rod protein [Vibrio angustum S14]
          Length = 261

 Score =  160 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 44/261 (16%), Positives = 97/261 (37%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M ++  +      A + +++ +++N++N +TVGF+  +V F ++  +I+           
Sbjct: 1   MHSALWVSKTGMAAQDTKMTAISNNLANVNTVGFKRDRVVFEDLFYSIQRQPGAQVDQLN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  S V           G+  +T  +LD A+ G  +F +E+  G  + +R+G+F
Sbjct: 61  QLPSGVQLGSGVRVVGTQKVFTQGNSQNTQQQLDLAVMGSGFFQIENSDGEVMFSRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165
            V  +G +V+  G      +            +  +         + + +  + L     
Sbjct: 121 HVNSEGLMVNGQGLPLQPQIQIPEEANTISIGVDGIVTATLAGDPQPQELGQITLAKFIN 180

Query: 166 SQGFVRRENSGI-SPNIPPTPLED----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +          P E         ++K+G LE SN   + EM  MI   + +
Sbjct: 181 PAGLEAIGGNLYKETQASGQPQEMIAGADGAGSLKQGALEGSNVQVVEEMVDMITTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
                ++   +  +    + +
Sbjct: 241 EMNAKVVSAADDMLKFVAQAV 261


>gi|91976162|ref|YP_568821.1| flagellar basal body rod protein FlgF [Rhodopseudomonas palustris
           BisB5]
 gi|91682618|gb|ABE38920.1| flagellar basal body rod protein [Rhodopseudomonas palustris BisB5]
          Length = 253

 Score =  160 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 61/251 (24%), Positives = 116/251 (46%), Gaps = 11/251 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND-----IDQK 55
           MQ +  +GL+ Q+ LE+++  VA+N++N +T GF+  +  F E +    ++      D++
Sbjct: 1   MQNTLLVGLSRQVVLERQMDVVANNLANINTNGFKAERSVFQEFLNTGAHEDNFQAQDRR 60

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115
           +SFV     Y     G    T   LD A++G A+  +++P+G   TRDG+  +   G LV
Sbjct: 61  VSFVQDRAAYHDFASGPMEETKNPLDVAIDGSAFLVVQTPQGERYTRDGKLSINPQGQLV 120

Query: 116 SASGKYPVLDM----ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171
           +ASG   + +          +        NV     ++    +   + + S    Q   +
Sbjct: 121 NASGYPVLGNSGPIVFQPTDKSINISSDGNVSVLEGVATIDSLRGKLRMVSFARPQSLEK 180

Query: 172 RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
           +  +  +               V++G++E SN NS+ EM +MI +T+ + S++ L+ +  
Sbjct: 181 QGGNLFAATSDRGA--PDPKAIVRQGYVEKSNVNSVLEMTRMIEVTRSYQSVSALLQQES 238

Query: 232 KSMLEAIRNIA 242
                AI  +A
Sbjct: 239 DLQKAAIERLA 249


>gi|153011530|ref|YP_001372744.1| flagellar basal body rod protein FlgF [Ochrobactrum anthropi ATCC
           49188]
 gi|151563418|gb|ABS16915.1| flagellar basal body rod protein [Ochrobactrum anthropi ATCC 49188]
          Length = 243

 Score =  160 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 83/242 (34%), Positives = 131/242 (54%), Gaps = 4/242 (1%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
             S  +GL++ + LE+R+  +A N++N  TVGFR    KF  +V    N     +SF  +
Sbjct: 3   NNSIYVGLSSLITLERRMDAIAHNVANVSTVGFRGEGTKFDTIVS---NKASDDVSFATA 59

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
           GK ++  E G  I T   LD A++GD W ++ +P+G I TRDGR  +   G LVS +G +
Sbjct: 60  GKSFIRTEAGPMIKTDNPLDVAVKGDVWMSVSTPQGQIYTRDGRMNMLPTGDLVSITG-H 118

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
           PVLD+   PI +        +   G I Q G  I  +GLY++           SG+ PN 
Sbjct: 119 PVLDVGGAPIVLNPGGGAPKISSDGAIYQNGAQIGAIGLYTIPADADLTYAGTSGVIPNK 178

Query: 182 PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           P  P+ D + V V +G +E SN ++M EM ++I +++ F  +  L+ + E ++ EAI+ +
Sbjct: 179 PAQPVADDNSVGVVQGMIEGSNVDAMTEMTRLISVSRAFEQVNNLLSQQESTVSEAIKTL 238

Query: 242 AS 243
            S
Sbjct: 239 GS 240


>gi|154253003|ref|YP_001413827.1| flagellar basal body rod protein FlgG [Parvibaculum lavamentivorans
           DS-1]
 gi|154156953|gb|ABS64170.1| flagellar basal-body rod protein FlgG [Parvibaculum lavamentivorans
           DS-1]
          Length = 261

 Score =  160 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 93/259 (35%), Gaps = 21/259 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             S +I     +A +  +  +++N++N  T GF+  + +F +++      +         
Sbjct: 1   MQSLSIAATGMMAQQLNVEVISNNIANMSTTGFKRGRAEFQDLLYQNLRRVGANSSDAGT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q    V +         G+  +T  +LD A++G  +F +E P      TR G F
Sbjct: 61  IVPSGVQVGLGVKTAAVNRIMTQGNMNNTENKLDVAIQGRGYFRIELPSGDDAYTRAGTF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
            +  DG L++A G      +   P            V          +++  M L +   
Sbjct: 121 DIGPDGQLITADGYTLAPGITIPPEATDIAISADGQVQVAIPGQTAPQIVGQMELVAFAN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +  +           +       +V +GFLE SN N++ E+  +I   + +
Sbjct: 181 EGGLDPLGGNLFAETPASGAPTIGTPGNDGLGSVLQGFLETSNVNAVSEITSLITAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
                +I  +++ M     
Sbjct: 241 EMNAKIITASDEMMSVTSN 259


>gi|239834448|ref|ZP_04682776.1| flagellar basal body rod protein FlgF [Ochrobactrum intermedium LMG
           3301]
 gi|239822511|gb|EEQ94080.1| flagellar basal body rod protein FlgF [Ochrobactrum intermedium LMG
           3301]
          Length = 243

 Score =  160 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 82/242 (33%), Positives = 133/242 (54%), Gaps = 4/242 (1%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
             S  +GL++ + LE+R+  +A N++N  TVGFR    KFS +V    +D    +SF  +
Sbjct: 3   NNSIYVGLSSLITLERRMDAIAHNVANVSTVGFRGEGTKFSSIVSDKASD---DVSFATA 59

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
           GK ++  E G  I T   LD A++GD W ++ +P+G I TRDGR  +   G LV+ +G +
Sbjct: 60  GKSFIRTEAGPMIKTDNPLDVAVKGDVWMSVSTPQGQIYTRDGRMNMLPTGDLVTVTG-H 118

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
           PVLD+   PI +        +   G I Q G  I  +GL+++           SG+ PN 
Sbjct: 119 PVLDVGGAPIVLNPAGGAPKISSDGAIYQNGAQIGAIGLFTIPADAELTYAGTSGVIPNK 178

Query: 182 PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           P  P+ D + V V +G +E SN ++M EM ++I +++ F  +  L+ + E ++ EAI+ +
Sbjct: 179 PAQPVADDNSVGVVQGMIEGSNVDAMTEMTRLISVSRAFEQVNNLLAQQETTVSEAIKIL 238

Query: 242 AS 243
            S
Sbjct: 239 GS 240


>gi|294679031|ref|YP_003579646.1| flagellar basal-body rod protein FlgG [Rhodobacter capsulatus SB
           1003]
 gi|294477851|gb|ADE87239.1| flagellar basal-body rod protein FlgG [Rhodobacter capsulatus SB
           1003]
          Length = 261

 Score =  160 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 96/259 (37%), Gaps = 21/259 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             +  I      A + R+  +++N++N  T G+   + +F++++                
Sbjct: 1   MRALQIAATGMSAQQMRVEVISNNLANMSTTGYNARRAEFADLMYQQATRPGTITANDGT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q    V S    ++   G   STG +LD A++G  +  +  P      TRDG  
Sbjct: 61  IVPAGVQIGLGVRSTAVSITLAQGPLASTGGDLDLAIDGYGFLEVTLPSGASAYTRDGGL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           K + DG +V++ G   V  +                V        + +++  + L     
Sbjct: 121 KRSADGQIVTSDGYPVVPGITLPDDATTISINAAGEVYAYFTNQVQPQLLGQITLAGFTN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
            +G     ++              +  T     +K+G+LE+S+ +++ E+ ++I   + +
Sbjct: 181 EKGLEAIGSNLFLETEASGAPTVAAPGTDGLGVIKQGYLEESSVDAVREITELIKAQRGY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
                +I   ++ +    +
Sbjct: 241 EMNAKVITAADEMLQATTQ 259


>gi|332298514|ref|YP_004440436.1| flagellar basal-body rod protein FlgG [Treponema brennaborense DSM
           12168]
 gi|332181617|gb|AEE17305.1| flagellar basal-body rod protein FlgG [Treponema brennaborense DSM
           12168]
          Length = 264

 Score =  160 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 49/261 (18%), Positives = 92/261 (35%), Gaps = 22/261 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S           +  +  +++N+SN +T G++  +V+F +++               
Sbjct: 1   MVRSLWTAATGMNGQQANIDAISNNLSNVNTTGYKQQRVEFEDLIYQNLKLAGTPATEDT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRF 106
                 Q  + V  G        GS  +TG + D A+ G+ +F   +       TRDG F
Sbjct: 61  VTPVGIQMGTGVKVGATQRIITQGSLQNTGVDTDMAVVGEGFFRVQQYDGSFAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLD---MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
           KV  +G LV++ G   + +        +      +   V  K   +     +  + LY  
Sbjct: 121 KVDMNGQLVTSEGLRVMPEIILPEGYNLSTLTVSDDGRVTVKIAGNDDPLTVGQLELYRF 180

Query: 164 DMSQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
             + G     ++                        K  FLE SN + + EM QMI   +
Sbjct: 181 PNAVGLEATGSNLFKVTNASGAAIAGRPGFDGMGVTKHKFLEMSNVSVVNEMVQMIVAQR 240

Query: 219 KFNSITTLIDENEKSMLEAIR 239
            +   +  I  ++  +  A+ 
Sbjct: 241 AYEFSSKAIQTSDTMLSSAVN 261


>gi|16126303|ref|NP_420867.1| flagellar basal body rod protein FlgG [Caulobacter crescentus CB15]
 gi|221235080|ref|YP_002517516.1| flagellar basal body rod protein FlgG [Caulobacter crescentus
           NA1000]
 gi|13637955|sp|Q06172|FLGG_CAUCR RecName: Full=Flagellar basal-body rod protein flgG; AltName:
           Full=Distal rod protein
 gi|13423543|gb|AAK24035.1| flagellar basal-body rod protein FlgG [Caulobacter crescentus CB15]
 gi|220964252|gb|ACL95608.1| flagellar basal-body rod protein flgG [Caulobacter crescentus
           NA1000]
          Length = 262

 Score =  160 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 40/263 (15%), Positives = 92/263 (34%), Gaps = 22/263 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             +     +   A +  +  +++N++N +TVGF+  + +F +++                
Sbjct: 1   MQALRTAASGMAAQQLNVEVISNNIANMNTVGFKRQRAEFQDLLYQTIERAGSQSSSDGN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q    V +G  Y   E G+   T + LD A++G  +  +  P      TR G F
Sbjct: 61  IVPTGVQVGGGVKAGSVYRITEQGTPTLTDSPLDLAIQGKGYMPILLPSGETAYTRAGNF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFN-VGEKGEISQKGKVIATMGLYSVDM 165
              D G +V+  G      +                V  K +   + + +  + L +   
Sbjct: 121 STNDQGQIVTEDGYLVQPGITIPQNATDITISKSGLVQVKLDGQPQPQTVGQIQLANFLN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++              +        + + + E SN +++ E+  +I   + +
Sbjct: 181 EGGLEAIGDNLFLETAASGAATLAAPGEPGFGMLLQHYTEASNVDAVSEITALITAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNIAS 243
              + +I   ++ + +A   + S
Sbjct: 241 EMNSKVISTADQML-QATSQLRS 262


>gi|221640826|ref|YP_002527088.1| flagellar basal body rod protein FlgF [Rhodobacter sphaeroides
           KD131]
 gi|221161607|gb|ACM02587.1| Hypothetical Protein RSKD131_2727 [Rhodobacter sphaeroides KD131]
          Length = 239

 Score =  160 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 61/242 (25%), Positives = 109/242 (45%), Gaps = 6/242 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    L  Q  L + + +VA+N++N  T GFR   + F+E V  ++ +    ++  +
Sbjct: 1   MDAAGYTTLTRQSGLMREMQSVANNIANLSTTGFRREGIVFTEHVKRLEGEASLSMASAS 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           + +  +    G    TG   DFA+ G+ +F +E+P+G  LTR G F    +G LV + G 
Sbjct: 61  ARQ--IDLTQGGLTRTGAPFDFAIMGEGFFLIETPQGQELTRAGSFTPNAEGELVDSDGN 118

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
              LD  + P+ IP       +   G +S   + I  +GL+      G      +  S  
Sbjct: 119 RL-LDAGAAPLFIPPDARGVVLSADGTLSAGDQPIGRVGLWQPTDPLGLRHEGGTRFSAE 177

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
               P E     T+ +G LEDSN   + E+ +MI + + +    + +D  +  +   +R 
Sbjct: 178 GGTEPAEG---ATLVQGALEDSNVEPVSEIARMIDVQRAYEMGQSFLDREDDRIRTTVRT 234

Query: 241 IA 242
           + 
Sbjct: 235 LG 236


>gi|239815249|ref|YP_002944159.1| flagellar basal-body rod protein FlgG [Variovorax paradoxus S110]
 gi|239801826|gb|ACS18893.1| flagellar basal-body rod protein FlgG [Variovorax paradoxus S110]
          Length = 262

 Score =  160 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 47/262 (17%), Positives = 95/262 (36%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS--- 57
           M  +  I      A +  + T+A+N++N +T GF+  KV FS+++      + Q      
Sbjct: 1   MFDALYISATGMQAQQLNVDTIANNLANVNTTGFKKSKVGFSDLMVREAGRLAQTPQEAG 60

Query: 58  ----------FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                      V         ++G    T +  D A++G+ +  +  P      TR G F
Sbjct: 61  ILGAESRLGAGVGIASVSKLFDMGDLKKTESAFDIAIQGEGFLEVTMPDGSSSFTRGGTF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           KV  DG L ++ G     ++A     Q  Q D    V  +         +  + L     
Sbjct: 121 KVNRDGLLATSGGFPLKSNVAIPDNAQNMQIDGDGRVRVQVGGQSTPIEVGQLDLVRFTS 180

Query: 166 SQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
               + + ++    +            +    +  +GFLE SN     EM  ++   + +
Sbjct: 181 PSALLPQGDNLYRSSTGSGEAIAAKASEDGMGSFAQGFLEGSNVKLTEEMVNLMVAQRVY 240

Query: 221 NSITTLIDENEKSMLEAIRNIA 242
            +   ++  +++ +   I  + 
Sbjct: 241 EANVKVMQASDEMLG-MINGLR 261


>gi|206603525|gb|EDZ40005.1| Flagellar basal body rod protein [Leptospirillum sp. Group II
           '5-way CG']
          Length = 261

 Score =  160 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 49/260 (18%), Positives = 84/260 (32%), Gaps = 21/260 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S     +   A +  L  + +N++N +T GF+  +  F +++               
Sbjct: 1   MFRSLWNAASGMEAQQTSLDVITNNLANVNTTGFKRQRANFQDLMYQTLVPPGEAQSLLG 60

Query: 54  -------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGR 105
                  Q    V SG        GSF  T   LD A++G+ +F +  P      TRDG 
Sbjct: 61  NQSPTGMQVGLGVRSGSVQKIFLQGSFRQTNNPLDLAIQGNGFFQISLPDGRTAYTRDGT 120

Query: 106 FKVTDDGSLVSASGKYPVLD-MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
           F +   G LV+  G             +         V        +   +  + L    
Sbjct: 121 FSIDGQGRLVTQDGLPTNPPITVPPNAKSVNVSPAGEVSVMLPGQVQPVRVGQLVLSQFV 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQK 219
              G   R ++           +  +  T     ++ GFLE SN N   E+  M+   + 
Sbjct: 181 NPAGLESRGDNLFMETAASGQPQLSNPGTNGAGRLQSGFLEASNVNVAEELVNMVIGQRA 240

Query: 220 FNSITTLIDENEKSMLEAIR 239
           +    T I    + +     
Sbjct: 241 YQMDATGIRTVNRMLGYTAT 260


>gi|32490792|ref|NP_871046.1| flagellar basal body rod protein FlgG [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|25165998|dbj|BAC24189.1| flgG [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 260

 Score =  160 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 91/259 (35%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A +  +  +++N+SN  T GF+  K  F +++               
Sbjct: 1   MIRSLAIAKTGLEAQQINMDVISNNISNVSTNGFKRQKAIFEDLLYQTIRQPGAKSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V S         G   +TG E D A++G  +F +    G  + TR+G F
Sbjct: 61  ILPSGLQLGTGVNSSATIKIHLQGGLTNTGNETDIAIQGPGFFQVLMSDGTNMYTRNGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQKGKVIATMGLYSVDM 165
           ++   G LV+++G      +               +         + + +  + + +   
Sbjct: 121 QLDQYGQLVTSNGYPVQPSITIPNGSSNLTISKDGIVSVMVPGQTQPQEVGQLTISTFIN 180

Query: 166 SQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
           S G      S                      ++K+ F+E+SN N   E+  MI   + +
Sbjct: 181 SSGLESAGESLYKETQSSGSPADNTPGMNGAGSLKQKFVENSNVNIAEELITMIQTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              + +I  +++ +    +
Sbjct: 241 ELNSKVISTSDQMLQRLSQ 259


>gi|254698165|ref|ZP_05159993.1| flagellar basal body rod protein FlgG [Brucella abortus bv. 2 str.
           86/8/59]
          Length = 246

 Score =  160 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 46/246 (18%), Positives = 86/246 (34%), Gaps = 21/246 (8%)

Query: 18  RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--------------ISFVASGK 63
            L  +A+N++N +T GF+  + +F++++   +                       V +  
Sbjct: 1   NLEVIANNIANINTTGFKRARAEFTDLLYQSERTAGVPNQANQAIVPEGALVGLGVQTAA 60

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122
                  GSF  TG   D AL G  WF ++SP    + TR G F    DG LV+  G   
Sbjct: 61  VRNLHIQGSFNQTGNPYDVALTGRGWFQIQSPTGETLYTRAGAFNKNADGQLVTLDGNPV 120

Query: 123 VLDMASVPIQIPQKDEIFNVGE-KGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
              +   P  I            K +       +  + L +     G      +      
Sbjct: 121 EPAITIPPDAIEVTITDTGQVFAKLQDQINQVDLGQLTLANFTNEAGLEPLGGNLYRETE 180

Query: 182 PPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                           ++K+G+LE SN + + E+  +I   + +   + +I   ++    
Sbjct: 181 ASGGPLVGVPGDPGYGSIKQGYLEASNVDPVKEITDLITAQRAYEMNSKVIQAADEMAAT 240

Query: 237 AIRNIA 242
             +N+ 
Sbjct: 241 VSKNLR 246


>gi|168186142|ref|ZP_02620777.1| flagellar basal-body rod protein FlgG [Clostridium botulinum C str.
           Eklund]
 gi|169295678|gb|EDS77811.1| flagellar basal-body rod protein FlgG [Clostridium botulinum C str.
           Eklund]
          Length = 259

 Score =  160 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 50/261 (19%), Positives = 103/261 (39%), Gaps = 23/261 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVG----------A 47
           M  S    ++  +  E +   +++N++N  TVG++   +    F +V+            
Sbjct: 1   MIRSIYTAVSGLINQEAQQDVISNNLANATTVGYKKDDLVGKSFKDVMMHNYDKVVRGKH 60

Query: 48  IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107
           +KNDI          + Y +   G+  ST  + DFAL+G  +F +        TRDG F 
Sbjct: 61  VKNDIGMLSMGCKLDQTYTNFTQGALQSTDKKTDFALQGKGFFTVSRGGRNFYTRDGHFH 120

Query: 108 VTDDGSLVSASGKYPVLDM------ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLY 161
           V   G LV+++G   +           + +    K    +  + GE+     +   + + 
Sbjct: 121 VDRGGYLVNSTGDKVIGKNLRTGATEPINVMQGGKPSKISCNDSGEMFVGNDLAYKVQVV 180

Query: 162 SVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221
             +  +   +  ++             +    VK+G+LE SN N M  +  M+   + F 
Sbjct: 181 DFNNYEALSKEGDNLY----TGGNPNVIENTMVKQGYLEKSNINVMEAVSDMMMSMRNFE 236

Query: 222 SITTLIDENEKSMLEAIRNIA 242
           S   L+   ++++ + +  + 
Sbjct: 237 SNQKLVQSLDETLGKTVNEVG 257


>gi|242278483|ref|YP_002990612.1| flagellar basal-body rod protein FlgF [Desulfovibrio salexigens DSM
           2638]
 gi|242121377|gb|ACS79073.1| flagellar basal-body rod protein FlgF [Desulfovibrio salexigens DSM
           2638]
          Length = 255

 Score =  160 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 54/258 (20%), Positives = 99/258 (38%), Gaps = 23/258 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFV- 59
           M++S    L   ++ E R+   A+N++N +T GF+     F +      +D         
Sbjct: 1   MRSSIFSALFGAMSNEHRIDISANNLANVNTTGFKRDNCAFQDTFIRFAHDYVADAKPYL 60

Query: 60  ---------------ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDG 104
                             +E +    GSF  TG  LD A+ GD +F ++      LTR+G
Sbjct: 61  RDKDQLPEAKIMARPRLSEEVIDMSQGSFQKTGNPLDLAIRGDGFFKVQKNGETFLTRNG 120

Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
            F ++ +G+LV+  G   + +   V +          V  +G I   G+ +  +      
Sbjct: 121 VFTLSSEGTLVTEQGYPVMANGGEVNL---PPRSRVAVDGEGVIFADGQEVGRLDFVQPA 177

Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224
             +   +   +  S      P E      V +G++E SN   + EM  MI   + F    
Sbjct: 178 DYRALKKEGENLFSNEGGEVPAE----GEVAQGYIEKSNVEVVNEMVAMIECQRSFEMYQ 233

Query: 225 TLIDENEKSMLEAIRNIA 242
            +I   ++   + I+ + 
Sbjct: 234 KMITTTDQLDQKVIQQVG 251


>gi|209964689|ref|YP_002297604.1| flagellar basal-body rod protein FlgF [Rhodospirillum centenum SW]
 gi|209958155|gb|ACI98791.1| flagellar basal-body rod protein FlgF [Rhodospirillum centenum SW]
          Length = 240

 Score =  159 bits (402), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 68/242 (28%), Positives = 110/242 (45%), Gaps = 5/242 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M+    I L+ Q A+ +++  VA+N++N +T GF++ +  F E +    +   +++SFV 
Sbjct: 1   MENVLYIALSRQEAMRRQMDVVANNIANMNTSGFKSQRPLFLEYL-ERPDRRQERMSFVQ 59

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
                 + + G    T   LD AL GD +FA+E+  G   TR G F++  D  LV  +G 
Sbjct: 60  DYGLMRNLQAGPVTVTDNPLDVALRGDGYFAVETLAGPRYTRAGGFQLNTDRELVDRNG- 118

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
            PVL  A   I IP       +   G I  +   +A + + S D  Q          S  
Sbjct: 119 LPVLSDAGARIVIPDGANQIRIKGDGSIETEQGPLARLKVVSFDDEQKMQELGGGLYSTE 178

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
               P+E      V +G LE SN   + E  QMI + + + +   +ID   + +  AIR 
Sbjct: 179 QEERPVEKPE---VTQGALEGSNVQPIVETTQMIDVLRAYQNTQRMIDSEHERLRTAIRQ 235

Query: 241 IA 242
           + 
Sbjct: 236 LG 237


>gi|167905092|ref|ZP_02492297.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei
           NCTC 13177]
          Length = 258

 Score =  159 bits (402), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 49/255 (19%), Positives = 92/255 (36%), Gaps = 20/255 (7%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID----------- 53
             I      A + +L  VA+N++N +TVGF+  +V F ++   ++               
Sbjct: 1   MWISKTGLQAQDAKLQAVANNLANVNTVGFKRDRVVFEDLFYRVERQPGAQLDQDNASPS 60

Query: 54  --QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTD 110
             Q  S             GS  +TG  LD A+ G  +  +    G    TR G+  +  
Sbjct: 61  GIQMGSGTRIVGTQKIFTDGSVQTTGQSLDVAVMGKGFIQVLMANGETGYTRAGQLSINA 120

Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169
           +G LV+A G     +++           E   V      +     +  + L +     G 
Sbjct: 121 EGLLVNAQGLPLQPEISIPENATDIAIGENGIVAATMPGASSPSEVGQIQLANFVNPAGL 180

Query: 170 VRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224
           +   ++     +   P  +    T     +K+G LE SN   + EM  MI   + +   T
Sbjct: 181 LALGDNLYMETVASGPPNEGEPGTDVFGKIKQGALEGSNVQVVEEMVDMIAAQRTYEMNT 240

Query: 225 TLIDENEKSMLEAIR 239
            ++   +  + +  +
Sbjct: 241 KVLSAADNMLQQLSQ 255


>gi|254508453|ref|ZP_05120573.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus 16]
 gi|219548663|gb|EED25668.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus 16]
          Length = 262

 Score =  159 bits (402), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 47/262 (17%), Positives = 94/262 (35%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +  +      A +  +ST+++N++N  TVG++  +  F ++     N    +     
Sbjct: 1   MHPALWVSKTGLDAQQTNISTISNNLANASTVGYKKSRAVFEDLFYQNINQPGGQSSQNT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    +             G+  +T   LD  +EGD +F +  P   I  TR+G+F
Sbjct: 61  ELPSGLMLGAGSKVVATQKVHTQGNTQTTNNSLDMMIEGDGFFQILMPDGNIGYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD--EIFNVGEKGEISQKGKVIATMGLYSVD 164
            V D+G++V++   Y +     +P             V  +    Q   V+  +      
Sbjct: 121 TVNDEGAIVTSGSGYNLQPEIVIPEDAISITVGTDGEVSVRVRGEQNNVVVGQITTVDFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +   P       ++          +++  LE SN N   E+  MI   + 
Sbjct: 181 NPGGLEPVGQNLYLPTGASGDPQEGVPGFDGFGDIRQSMLETSNVNVTEELVNMIEAQRV 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   +K M    + +
Sbjct: 241 YEMNSKVISAVDKMMSFVNQQL 262


>gi|332559803|ref|ZP_08414125.1| FlgF2 [Rhodobacter sphaeroides WS8N]
 gi|332277515|gb|EGJ22830.1| FlgF2 [Rhodobacter sphaeroides WS8N]
          Length = 239

 Score =  159 bits (402), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 62/242 (25%), Positives = 109/242 (45%), Gaps = 6/242 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    L  Q  L + + +VA+N++N  T GFR   + F+E V  ++ +    ++  +
Sbjct: 1   MDAAGYTTLTRQSGLMREMQSVANNIANLSTTGFRREGIVFTEHVKRLEGEASLSMASAS 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           + +  +    G    TG   DFA+ G+ +F +E+P+G  LTR G F    +G LV A G 
Sbjct: 61  ARQ--IDLTQGGLTRTGAPFDFAIMGEGFFLIETPQGQELTRAGSFTPNAEGELVDADGN 118

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
              LD  + P+ IP       +   G +S   + I  +GL+      G      +  S  
Sbjct: 119 RL-LDAGAAPLFIPPDARGVVLSADGTLSAGDQPIGRVGLWQPTDPLGLRHEGGTRFSAE 177

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
               P E     T+ +G LEDSN   + E+ +MI + + +    + +D  +  +   +R 
Sbjct: 178 GGTEPAEG---ATLVQGALEDSNVEPVSEIARMIDVQRAYEMGQSFLDREDDRIRTTVRT 234

Query: 241 IA 242
           + 
Sbjct: 235 LG 236


>gi|54308099|ref|YP_129119.1| flagellar basal body rod protein FlgG [Photobacterium profundum
           SS9]
 gi|46912525|emb|CAG19317.1| putative polar flagellar FlgG [Photobacterium profundum SS9]
          Length = 262

 Score =  159 bits (402), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 43/262 (16%), Positives = 94/262 (35%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +  +      A +  +ST+++N++N  T+GF+  +  F ++     N    +     
Sbjct: 1   MHPALWVSKTGLDAQQTNISTISNNLANASTIGFKKSRAVFEDLFYQNINQPGGQSSQDT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    +             G+  +T   +D  +EG+ +F +  P   I  TR+G+F
Sbjct: 61  ELPSGLMLGAGSKVVATQKVFTQGNTQTTNNSMDMMIEGEGFFQILLPDGNIGYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD--EIFNVGEKGEISQKGKVIATMGLYSVD 164
            +  DG +V+    Y V    ++P             V  +    Q+ +V+  +      
Sbjct: 121 TINGDGQMVTTGSGYVVQPEIAIPEDAVGITVGNDGEVSARIRGQQENQVLGQLTTVGFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +   P       ++          +++  LE SN N   E+  MI   + 
Sbjct: 181 NPGGLEPIGQNLFLPTGASGDAQEGVPGLDGLGAIRQSMLETSNVNVTEELVNMIEAQRV 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   ++ +    + +
Sbjct: 241 YEMNSKVISTVDQMLSYVNQQL 262


>gi|296447438|ref|ZP_06889363.1| flagellar basal-body rod protein FlgG [Methylosinus trichosporium
           OB3b]
 gi|296255058|gb|EFH02160.1| flagellar basal-body rod protein FlgG [Methylosinus trichosporium
           OB3b]
          Length = 262

 Score =  159 bits (402), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 43/256 (16%), Positives = 87/256 (33%), Gaps = 21/256 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----------- 50
             +  I      A +Q +  +++N++N +T  F+  + +F++++                
Sbjct: 1   MRALAIAATGMNAQQQNIEVISNNIANINTTAFKRSRAEFTDLLYQADRLQGVSNRGRDA 60

Query: 51  ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
              +  Q    V        +  GS   TG +LD AL G  WF +  P   I+ TR G F
Sbjct: 61  TVPEGAQTGLGVRLTAIRSLQTQGSLAQTGNQLDLALNGRGWFQVTGPDSEILYTRSGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIP-QKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
               +G LV+  G      +      +     +   V          + +  + + +   
Sbjct: 121 STNANGQLVTGDGYLVSPTIIIPNNAVSVSVSQSGLVTAVIGGQTNPQQLGQLTIANFAN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +    N                  + + +LE SN +S+ E+  +I   + F
Sbjct: 181 ESGLEALGGNLFRQNQASGTPVVGVPGDPGYGVISQYYLESSNVDSVKELVNLIAAQRAF 240

Query: 221 NSITTLIDENEKSMLE 236
              + +I   ++    
Sbjct: 241 ELNSKVISAVDEMAGT 256


>gi|124516715|gb|EAY58223.1| Flagellar basal body rod protein FlgG [Leptospirillum rubarum]
          Length = 261

 Score =  159 bits (402), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 50/260 (19%), Positives = 84/260 (32%), Gaps = 21/260 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S     +   A +  L  + +N++N +T GF+  +  F +++               
Sbjct: 1   MFRSLWNAASGMEAQQTSLDVITNNLANVNTTGFKRQRANFQDLMYQTLVPPGEAQSLLG 60

Query: 54  -------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGR 105
                  Q    V SG        GSF  T   LD A++G+ +F +  P      TRDG 
Sbjct: 61  NQSPTGMQVGLGVRSGSVQKIFLQGSFRQTNNPLDLAIQGNGFFQISLPDGRTAYTRDGT 120

Query: 106 FKVTDDGSLVSASGKYPVLD-MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
           F +   G LV+  G             +         V        +   +  + L    
Sbjct: 121 FSIDGQGRLVTQDGLPTNPPITVPPNAKSVNVSPAGEVSVMLPGQVQPVRVGQLVLSQFV 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQK 219
              G   R N+           +  +  T     ++ GFLE SN N   E+  M+   + 
Sbjct: 181 NPAGLESRGNNLFMETAASGQPQLSNPGTNGTGRLQSGFLEASNVNVAEELVNMVIGQRA 240

Query: 220 FNSITTLIDENEKSMLEAIR 239
           +    T I    + +     
Sbjct: 241 YQMDATGIRTVNRMLGYTAT 260


>gi|163850063|ref|YP_001638106.1| flagellar basal body rod protein FlgG [Methylobacterium extorquens
           PA1]
 gi|218528666|ref|YP_002419482.1| flagellar basal body rod protein FlgG [Methylobacterium
           chloromethanicum CM4]
 gi|240137197|ref|YP_002961666.1| flagellar biosynthesis; cell-distal portion of basal-body rod
           [Methylobacterium extorquens AM1]
 gi|254559209|ref|YP_003066304.1| cell-distal portion of basal-body rod biosynthesis protein
           [Methylobacterium extorquens DM4]
 gi|163661668|gb|ABY29035.1| flagellar basal-body rod protein FlgG [Methylobacterium extorquens
           PA1]
 gi|218520969|gb|ACK81554.1| flagellar basal-body rod protein FlgG [Methylobacterium
           chloromethanicum CM4]
 gi|240007163|gb|ACS38389.1| flagellar biosynthesis; cell-distal portion of basal-body rod
           [Methylobacterium extorquens AM1]
 gi|254266487|emb|CAX22251.1| flagellar biosynthesis; cell-distal portion of basal-body rod
           [Methylobacterium extorquens DM4]
          Length = 262

 Score =  159 bits (402), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 44/256 (17%), Positives = 87/256 (33%), Gaps = 21/256 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55
             +  I      A +  L  +A+N++N +T GF+  + +F++++   +            
Sbjct: 1   MRALAIAATGMSAQQLNLEVIANNIANLNTTGFKGARAEFTDLLYQAERQQGVPNQAGQE 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                      V +         GS  +TG +LD A+ G  +F + SP   I  TR G F
Sbjct: 61  AVPEGAMLGLGVRAAAIRNLHRQGSLANTGNQLDLAVNGRGYFQITSPAGEIQYTRAGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE-KGEISQKGKVIATMGLYSVDM 165
              + G LV+  G      +                   K +     + +  + L +   
Sbjct: 121 NKNNAGQLVTMEGYAVDPAILIPQNTTQVTINESGQVFAKIDGQVALQNVGQLTLANFAN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLS-----GVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     N               +        +++G+LE SN + + E+  +I   + F
Sbjct: 181 DSGLEPLGNGLYRETPASGAPVVGNPGDVSYGKLQQGYLEGSNVDPVKEITSLITAQRAF 240

Query: 221 NSITTLIDENEKSMLE 236
              + +I   ++    
Sbjct: 241 EMNSKVIQAADEMAGT 256


>gi|288958675|ref|YP_003449016.1| flagellar basal-body rod protein [Azospirillum sp. B510]
 gi|288910983|dbj|BAI72472.1| flagellar basal-body rod protein [Azospirillum sp. B510]
          Length = 261

 Score =  159 bits (402), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 96/259 (37%), Gaps = 21/259 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             S  IG    +A +  + T+++N++N+ T G++  + +F +++      I         
Sbjct: 1   MRSLAIGATGMIAQQLNVETISNNIANSTTTGYKKQRAEFQDLLYQNFRRIGSTSSDAGT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V         E G+   T  +LD A+ G  +F +  P      TR G F
Sbjct: 61  VVPTGVQVGAGVRVAAVARVLEQGNLNITDNKLDVAINGSGYFQITLPSGDTSYTRAGNF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVG-EKGEISQKGKVIATMGLYSVDM 165
           K++  G +V+A G     ++      +            K +     + +  + L +   
Sbjct: 121 KLSPQGVIVTADGYTVQPNITIPTNAVDISINSSGEVLVKLDGQTATQNVGQIQLATFAN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKF 220
           + G     ++              +        V +G LE SN N + E+  +I   + +
Sbjct: 181 AAGLEATGDNLFMETAASGQPVTGNPGAPGFGRVTQGALETSNVNVVQEITTLITAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              + +I   ++ M +A +
Sbjct: 241 EMNSKVIKTTDEMMQQASQ 259


>gi|89069819|ref|ZP_01157154.1| putative flagellar basal body rod protein [Oceanicola granulosus
           HTCC2516]
 gi|89044620|gb|EAR50736.1| putative flagellar basal body rod protein [Oceanicola granulosus
           HTCC2516]
          Length = 239

 Score =  159 bits (402), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 65/239 (27%), Positives = 111/239 (46%), Gaps = 5/239 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    L  Q  L   +  +A+N++N  T G+R+  V FSE V A+    D      A
Sbjct: 1   MGNASYTTLTRQSGLMAEMRLIANNIANAATTGYRSEGVIFSEYVSALGPGHDSLSMARA 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           + ++      G   +TG   D A+EG+ +F +++P G  LTR G F    +G LV+  G 
Sbjct: 61  AVRDTDI-SPGGMTATGGAFDLAIEGEGFFLVQTPGGERLTRAGHFMPNANGDLVTPDGY 119

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
            PVLD    P+ +P       V   G +S  G+ +  +G+       G VR +       
Sbjct: 120 -PVLDAGGAPLFVPPAAASVTVAPDGVLSADGQPLGQVGVVRPRDPAGLVREDGVRFRAE 178

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
               P+     V V +GFLE+SN + + ++ +MI + + +      +++ ++ +  AIR
Sbjct: 179 GGFEPV---PRVRVAQGFLEESNVDPILQVARMIEVQRAYELGQRFLEQEDERLRGAIR 234


>gi|212634350|ref|YP_002310875.1| flagellar basal body rod protein FlgG [Shewanella piezotolerans
           WP3]
 gi|212555834|gb|ACJ28288.1| Flagellar basal-body rod protein FlgG [Shewanella piezotolerans
           WP3]
          Length = 262

 Score =  159 bits (402), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 43/262 (16%), Positives = 90/262 (34%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  I      A +  +S +++N++N  TVGF+  +  F +++    N          
Sbjct: 1   MHPALWISKTGLDAQQTDISVISNNVANASTVGFKKSRAVFEDLLYQNVNQAGGVSASNT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                    +             G+ ++T   LD  +EG  +F ++ P G    TR G+F
Sbjct: 61  KLPNGLNIGAGTQVVATQKVFTQGNMLTTDNSLDLMVEGPGFFEVQMPDGTAAYTRTGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQK--GKVIATMGLYSVD 164
            + D G +V+    Y V    ++P                +       +V+  + +    
Sbjct: 121 SLDDTGQIVTPGSGYVVQPAITIPDDATSITVSAEGEVSVKTPGNAENQVVGQLAMSDFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +                       +++G LE SN N   E+  +I   + 
Sbjct: 181 NPAGLDPMGQNLYMETGASGTPIQGTASLDGMGAIRQGALETSNVNVTEELVNLIESQRI 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   ++ +    +N+
Sbjct: 241 YEMNSKVISAVDQMLSYVNQNL 262


>gi|83594174|ref|YP_427926.1| hypothetical protein Rru_A2842 [Rhodospirillum rubrum ATCC 11170]
 gi|83577088|gb|ABC23639.1| conserved hypothetical protein [Rhodospirillum rubrum ATCC 11170]
          Length = 245

 Score =  159 bits (402), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 59/240 (24%), Positives = 112/240 (46%), Gaps = 6/240 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---DIDQKIS 57
           M+ +  I L+ Q AL ++L  V++N++N +T G++  +  FSE +   ++    + +K++
Sbjct: 1   MENTSYIALSRQTALWRQLDVVSNNLANMNTNGYQAEQTLFSEYLMNTRDSHFRLPEKLA 60

Query: 58  FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSA 117
           +      Y     G    TG  LD A+ G+ +F +E   G   TR GRF +  +G +V+A
Sbjct: 61  YTQDAGTYRDLTAGPLEHTGNPLDLAINGEGYFEVEDGAGPAYTRGGRFTLDAEGKVVTA 120

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177
            G  P++  A  P+ I   +    +   G +S +   +  + L S +  Q   R      
Sbjct: 121 DG-RPLMTDAGTPLVIAPNEGEVTISATGTVSTENGPVGKLRLVSFEDEQKLRRIGGGLF 179

Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
             +        ++   +++G +E SN N + EM +MI + + + +   LI+      L A
Sbjct: 180 --DSGDQQANPITEPRIEQGMIEKSNVNPVVEMTRMIQVQRSYEAANKLIESENDRQLNA 237


>gi|304392506|ref|ZP_07374446.1| flagellar basal-body rod protein FlgG [Ahrensia sp. R2A130]
 gi|303295136|gb|EFL89496.1| flagellar basal-body rod protein FlgG [Ahrensia sp. R2A130]
          Length = 262

 Score =  159 bits (402), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 45/262 (17%), Positives = 93/262 (35%), Gaps = 21/262 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----------- 50
             + +I      A ++ L  +A N++N +T GF+  +V+F++++   +            
Sbjct: 1   MRALSIAATGMQAQQKNLDVIAHNIANINTTGFKRGRVEFTDLIYDTERLNGIPNRANSA 60

Query: 51  ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
              +       V +         G    TG   D AL G+ WF +E+     +  R G F
Sbjct: 61  NVPEGAHFGLGVRTASVRNVHLQGQVAQTGNRFDLALTGNGWFQIENAAGETVYQRSGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE-KGEISQKGKVIATMGLYSVDM 165
                G LV+  G      +                   +   + + + I  + L +   
Sbjct: 121 NTNGAGELVTQDGLRVQPGITVPDNTTDIFINASGAVFARVGGAAEQQEIGQLSLATFAN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++  + +      +          T+++G+LE SN  S+ E+ Q+I   + +
Sbjct: 181 DVGLTPLGDNLFAQSDASGEPQVGTPGDPGYATIRQGYLESSNVESVKEITQLIAAQRGY 240

Query: 221 NSITTLIDENEKSMLEAIRNIA 242
              + +I   +       RN+ 
Sbjct: 241 EMNSKVIQAADDMASIVSRNLR 262


>gi|332704824|ref|ZP_08424912.1| flagellar basal-body rod protein FlgF [Desulfovibrio africanus str.
           Walvis Bay]
 gi|332554973|gb|EGJ52017.1| flagellar basal-body rod protein FlgF [Desulfovibrio africanus str.
           Walvis Bay]
          Length = 277

 Score =  159 bits (402), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 53/277 (19%), Positives = 106/277 (38%), Gaps = 38/277 (13%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-------- 52
           MQ +    +   L+ E R++ +++N++N  T G++T  V F +V     +D         
Sbjct: 1   MQEAIYSAVFGALSSEHRMNIISNNLANVSTTGYKTDSVTFKDVFVPFAHDYILDSKEHL 60

Query: 53  --------DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDG 104
                      I+     +       GS   TG  LD A++GD +F + +P G+  TR+G
Sbjct: 61  RAKPLWPDADVIAKPRLAEHKTDFAQGSLRKTGDPLDLAIQGDGFFKILTPDGVRYTRNG 120

Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
            F    +G +V ++G   +               +  +   G +S+ G  + T+ L   D
Sbjct: 121 HFNAMPNGQIVDSNGNPLLGTD---GPIFLSGSGVVEIDPAGNVSEGGAQVGTIALVRFD 177

Query: 165 MSQGFVRRENSGI-------------------SPNIPPTPLEDLSGVTVKRGFLEDSNAN 205
             +G ++   +                              +      +++GFLE SN  
Sbjct: 178 NPRGVIKDGQNLYKLSEDFEANEMAVSPGMPEITTGSDGTPQTRISPVIQQGFLESSNVE 237

Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            + EM +MI + + F +   ++   +      I+++ 
Sbjct: 238 IVTEMVRMIEVNRVFEAYQKIMRGTQDMDSSLIKSMG 274


>gi|312882657|ref|ZP_07742394.1| flagellar basal body rod protein FlgG [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309369618|gb|EFP97133.1| flagellar basal body rod protein FlgG [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 262

 Score =  159 bits (402), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 48/262 (18%), Positives = 95/262 (36%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +  +      A +  +ST+++N++N  TVGF+  +  F ++     N    +     
Sbjct: 1   MHPALWVSKTGLDAQQTNISTISNNLANASTVGFKKSRAVFEDLFYQNINQPGGQSSQNT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    +             G+  +T   LD  +EGD +F +  P   I  +R+G+F
Sbjct: 61  ELPSGLMLGAGSKVVATQKVHTQGNTQTTNNSLDMMIEGDGFFQILMPDGNIGYSRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD--EIFNVGEKGEISQKGKVIATMGLYSVD 164
            V D+G +V++   Y +    ++P             V  +    Q  +V+  +      
Sbjct: 121 TVNDEGIIVTSGAGYTLEPEIAIPEDAISITVGTDGEVSVRVRGQQNNQVVGQITTVDFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +   P       ++          V++  LE SN N   E+  MI   + 
Sbjct: 181 NPGGLEPIGQNLYLPTGASGDPQEGVPGFDGFGDVRQSMLETSNVNVTEELVNMIEAQRV 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   +K M    + +
Sbjct: 241 YEMNSKVISAVDKMMGFVNQQL 262


>gi|90411007|ref|ZP_01219021.1| putative polar flagellar FlgG [Photobacterium profundum 3TCK]
 gi|90328220|gb|EAS44531.1| putative polar flagellar FlgG [Photobacterium profundum 3TCK]
          Length = 262

 Score =  159 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 43/262 (16%), Positives = 94/262 (35%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +  +      A +  +ST+++N++N  T+GF+  +  F ++     N    +     
Sbjct: 1   MHPALWVSKTGLDAQQTNISTISNNLANASTIGFKKSRAVFEDLFYQNINQPGGQSSQDT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    +             G+  +T   +D  +EG+ +F +  P   I  TR+G+F
Sbjct: 61  ELPSGLMLGAGSKVVATQKVFTQGNTQTTNNAMDMMIEGEGFFQVLLPDGNIGYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD--EIFNVGEKGEISQKGKVIATMGLYSVD 164
            +  DG +V+    Y V    ++P             V  +    Q+ +V+  +      
Sbjct: 121 TINGDGQMVTTGSGYVVQPEIAIPEDAVGITVGNDGEVSARIRGQQENQVLGQLTTVGFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +   P       ++          +++  LE SN N   E+  MI   + 
Sbjct: 181 NPGGLEPIGQNLFLPTGASGDAQEGVPGLDGLGAIRQSMLETSNVNVTEELVNMIEAQRV 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   ++ +    + +
Sbjct: 241 YEMNSKVISTVDQMLSYVNQQL 262


>gi|312621331|ref|YP_004022944.1| fagellar hook-basal body protein [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312201798|gb|ADQ45125.1| fagellar hook-basal body protein [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 255

 Score =  159 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 51/258 (19%), Positives = 103/258 (39%), Gaps = 21/258 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS-----------EVVGAIK 49
           M        +  +  ++ +   A+N++N  T GF+    +             + V +  
Sbjct: 1   MIRGIYTSASGMILNQKLMDLTANNVANVSTTGFKRDVAQIESFRNMLVYRIYDKVTSPD 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP-----RGIILTRDG 104
           N I          +       G +I T   L+ A++GD +F +E P     + I  TR+G
Sbjct: 61  NAIGYMSLGADVSRIVSDFSQGLYIKTDEPLNLAIKGDGFFTIEVPENQGAQQIFYTRNG 120

Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
            F +   G LV+ +G Y +         + Q      + E+G + Q G+++  + +    
Sbjct: 121 AFTLNSRGELVTLNGFYVLG---QNGRIVLQNGGQVRIDEQGNVYQNGRIVDRLRVVDFQ 177

Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224
                 +  N+    +     +       V +G+LE SN NS+ EM  MI++ + + +  
Sbjct: 178 DKSLLRKVGNNLYEADATVQQIPFS--GKVLQGYLEGSNVNSVQEMVNMINVLRAYEANQ 235

Query: 225 TLIDENEKSMLEAIRNIA 242
                 ++++ +A+  IA
Sbjct: 236 KAFVIQDETLQKAVNEIA 253


>gi|160878401|ref|YP_001557369.1| flagellar basal body rod protein [Clostridium phytofermentans ISDg]
 gi|160427067|gb|ABX40630.1| flagellar basal body rod protein [Clostridium phytofermentans ISDg]
          Length = 257

 Score =  159 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 53/259 (20%), Positives = 102/259 (39%), Gaps = 21/259 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51
           M      G       ++RL  +++N++N+ TVG++   V    F +V+     D      
Sbjct: 1   MVRGLYTGWTGMENEQKRLDIISNNLANSATVGYKKEGVTNQSFDDVLTLKIRDESENFT 60

Query: 52  ---IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-----PRGIILTRD 103
              I +    V  G+ Y     GS   TG   DFA+EG  +F +E            TR 
Sbjct: 61  DKRIGKMTLGVKLGEVYTDYTQGSLRETGNTFDFAIEGSGFFKMEVLDKDGNSKERYTRA 120

Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
           G+F +  +G +V  +G +  L      +Q+P       +  +G +   G  +  + +   
Sbjct: 121 GQFLMDKEGYVVDVNGNH--LMSEGGYLQVPTDASQIVIDLQGNVFADGAQVDKLVVTDF 178

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223
           +      +   S              +   +++G+ E SN N + EM  MI +T+ + + 
Sbjct: 179 ENYDYLKKFGESMYE--AVDGARVKDTAAGIRQGYTEQSNVNVVSEMVNMIAITRAYEAN 236

Query: 224 TTLIDENEKSMLEAIRNIA 242
             ++   + ++  A  +I 
Sbjct: 237 QKVLQSIDGTLELAANSIG 255


>gi|150388210|ref|YP_001318259.1| hypothetical protein Amet_0370 [Alkaliphilus metalliredigens QYMF]
 gi|149948072|gb|ABR46600.1| protein of unknown function DUF1078 domain protein [Alkaliphilus
           metalliredigens QYMF]
          Length = 264

 Score =  159 bits (401), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 50/264 (18%), Positives = 96/264 (36%), Gaps = 24/264 (9%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             +     +   A +  + TVA+NM+N +T  ++  + +F +++ A     +        
Sbjct: 1   MRALWTAASGMKAQQLNIDTVANNMANVNTTAYKAQRTEFKDLLYANMKRTNLNNGQGSP 60

Query: 54  ---QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVT 109
              Q    V           G+   T   LD A++G+ + A+E P   I  TRDG  K +
Sbjct: 61  VNLQVGHGVMPVATSRMFTTGNLEQTANPLDVAIDGEGFLAIEGPNGEIYYTRDGSLKFS 120

Query: 110 ---DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK----VIATMGLYS 162
              D+  LV++ G   + D     I       I         ++        + T+ L  
Sbjct: 121 VEMDEMRLVTSEGYTVLSDFDFEIIFDEGMKNIAISEGGVITAENEFGDIEELDTIKLVK 180

Query: 163 VDMSQGFVRRENSGISPNIPP----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
               QG      +     +          +    ++ +GFLE SN   + EM +MI   +
Sbjct: 181 FLNPQGLESVGRNLYKETVASGEEIPMEGEGRTSSILQGFLETSNVQIVDEMVKMITAQR 240

Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242
            + + +  I   ++ +     N+ 
Sbjct: 241 AYETSSKTIQTADEMLG-MANNLR 263


>gi|301168504|emb|CBW28094.1| putative flagellar basal-body rod protein [Bacteriovorax marinus
           SJ]
          Length = 289

 Score =  159 bits (401), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 56/272 (20%), Positives = 106/272 (38%), Gaps = 34/272 (12%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF------ 58
             + L+  +A ++++ T+A+N++N +T GF+  ++ F E +   +   +Q +        
Sbjct: 16  LWVPLSGAIAQQRKVETIANNVANANTPGFKKDQIVFKEYLTQFEKGYEQDLDLPHKEWK 75

Query: 59  --------------VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDG 104
                         V     +   + G    TG  LD AL+G  +  + +P G+  TR G
Sbjct: 76  PEDFYRSYGAEHAKVKVDGSFTDFQQGQTTPTGNPLDVALKGKGFIEVLTPNGVRYTRKG 135

Query: 105 RFKVTDDGSLVSASGKYPV--------------LDMASVPIQIPQKDEIFNVGEKGEISQ 150
              +   G LV+  G   +                     IQ+PQ      +  +GE+S 
Sbjct: 136 NLSINPAGLLVTDGGNPVLSKIDPALLLAGENLPSPQERTIQLPQNSGRLAINFQGELSN 195

Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEM 210
               I+ + +   +      +  NS              +   V +GF+E SN N++ EM
Sbjct: 196 SNGKISDLSIVEFNDIHALKKEGNSFYINEKFENISTAENKTAVYQGFIEQSNVNAIQEM 255

Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            ++I   + F SI  +I   +    + +  IA
Sbjct: 256 SELIKANRNFESIQRVIKTYDTISGKGVNEIA 287


>gi|170737040|ref|YP_001778300.1| flagellar basal-body rod protein FlgG [Burkholderia cenocepacia
           MC0-3]
 gi|169819228|gb|ACA93810.1| flagellar basal-body rod protein FlgG [Burkholderia cenocepacia
           MC0-3]
          Length = 261

 Score =  159 bits (401), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 49/258 (18%), Positives = 94/258 (36%), Gaps = 19/258 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  I      A + +L  +A+N++N +TVGF+  +  F ++    +           
Sbjct: 1   MNHAMWISKTGIQAQDAKLQAIANNLANVNTVGFKRDRAVFEDMFYRAERQPGAQVSDNA 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFK 107
                Q  +             G+   TG  LD A+ G+ +  +E P G +  TR G+ +
Sbjct: 61  TGPGVQLGNGTRIAGTQKVFTTGALQETGQPLDVAVVGNGFLQVEMPNGEVGYTRAGQLR 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG-KVIATMGLYSVDMS 166
           + D G L +A G   V  +   P  +               + K    +  + L      
Sbjct: 121 LNDQGRLTNAQGLPLVPGIDIPPEAVGITISENGTVSVSTGAGKTLAEVGQLQLAQFVNP 180

Query: 167 QGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221
            G +    +  +  +      +         T+K+G LE SN  ++ EM +MI   + + 
Sbjct: 181 AGLLALGGNLYAETVASGAPTESEPGQNGIGTIKQGALEGSNVLAVEEMVEMIAAQRTYE 240

Query: 222 SITTLIDENEKSMLEAIR 239
             T ++   +  M    +
Sbjct: 241 MNTKVLSAADNMMQYLSQ 258


>gi|119947175|ref|YP_944855.1| flagellar basal-body rod protein FlgG [Psychromonas ingrahamii 37]
 gi|119865779|gb|ABM05256.1| flagellar basal-body rod protein FlgG [Psychromonas ingrahamii 37]
          Length = 261

 Score =  159 bits (401), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 47/259 (18%), Positives = 99/259 (38%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M ++  I      A + +++ +++N++N +TVGF+  +V F ++  +I+           
Sbjct: 1   MNSALWISKTGMAAQDAKMTAISNNLANINTVGFKRDRVVFEDLFYSIQKQPGASVDGQN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106
                 Q  + V           GS  +T  ELD A+ G  +F +E+    I+ +R+G+F
Sbjct: 61  KLPTGLQLGNGVRVVGTQKVYTQGSIQNTSQELDLAILGAGFFQIENSDGTIMFSRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
            +  +G  V+  G   +  +            I   V        + + I  + L +   
Sbjct: 121 HLNAEGQFVNTQGLSLIPQVNVPQGATSVSIAIDGKVSAVIPGQTELEQIGEITLVTFMN 180

Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G + +  +  S         +          +K+G LE SN   + EM  MI   + +
Sbjct: 181 PSGLMAKGGNLFSATESSGAANELTAGLDGAGIIKQGALEGSNVQVVEEMVDMISTQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
                ++   ++ +    +
Sbjct: 241 EMSAKMVSAADEMLKYIAQ 259


>gi|294084416|ref|YP_003551174.1| flagellar basal-body rod protein FlgG [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292663989|gb|ADE39090.1| flagellar basal-body rod protein FlgG [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 262

 Score =  159 bits (401), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 92/259 (35%), Gaps = 20/259 (7%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------- 55
           +S ++      A + R+  +A+N++N +T GF+  +  F  ++  ++    ++       
Sbjct: 4   SSMHVAKTGLNAQQTRMQVIANNLANVNTTGFKRDRANFETLLYQVRRSAGEETSADTDL 63

Query: 56  ------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKV 108
                  +             GS I T   LD A+EG  +F +  P   I  TR+G F  
Sbjct: 64  TSAFAVGTGARIVNTQKMMSQGSMIQTDNSLDLAIEGSGFFQVLLPDGQIGYTRNGSFST 123

Query: 109 TDDGSLVSASGKYPVLDMASV-PIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
             +G+L + SG     ++                V        + + +  M +   +  +
Sbjct: 124 NAEGTLTTPSGYVLQPEIQIPGNASQINISGDGIVSVIVAGEIEPQNVGQMTIADFNNRR 183

Query: 168 GFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222
           G      S                ++     + +G LE SN N + E+  MI   + +  
Sbjct: 184 GLQPIGESFSIETAASGAAIIANPQEQGFGKLVQGSLEASNVNVVQELVNMIETQRAYEV 243

Query: 223 ITTLIDENEKSMLEAIRNI 241
            +  I   ++ +     N+
Sbjct: 244 SSKSITSVDEMLRFISNNL 262


>gi|315185553|gb|EFU19322.1| fagellar hook-basal body protein [Spirochaeta thermophila DSM 6578]
          Length = 269

 Score =  158 bits (400), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 51/265 (19%), Positives = 99/265 (37%), Gaps = 36/265 (13%)

Query: 12  QLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND---------------ID 53
             +   R+  +A+N++N D  G++        F E++    ND               + 
Sbjct: 1   MASQLNRMDAIANNLANVDLTGYKRDTAIFKAFPELLIRRMNDKYFKVPWGSIDNTPVVG 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113
           +  + V + + Y   E G    T     FALEG  +F + +P+G   TR+G F +  +G 
Sbjct: 61  KLGTGVETNEVYTVFEQGPLKETKDPFHFALEGQGFFTVLTPQGERYTRNGSFILGPEGL 120

Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGE----------------ISQKGKVIAT 157
           LV+  G   V +   + I+        +                         + +++  
Sbjct: 121 LVTKEGYPVVGENGLIHIKANNFVVDEDGRIFQNARFAEDPDRLVALEENEWDETELVDR 180

Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPLE--DLSGVTVKRGFLEDSNANSMYEMGQMIH 215
           + + +V   +   ++ +S           E        V++GFLE SN N + EM QMI 
Sbjct: 181 LKIVNVRRPRYLQKQGDSLWRTTRESGEAEILQDGRPKVRQGFLEGSNVNPVTEMVQMIE 240

Query: 216 LTQKFNSITTLIDENEKSMLEAIRN 240
           + + + +    I+  +  +   I  
Sbjct: 241 VNRAYEANQKTIETQDSLLGRLINE 265


>gi|261407975|ref|YP_003244216.1| fagellar hook-basal body protein [Paenibacillus sp. Y412MC10]
 gi|261284438|gb|ACX66409.1| fagellar hook-basal body protein [Paenibacillus sp. Y412MC10]
          Length = 274

 Score =  158 bits (400), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 46/271 (16%), Positives = 96/271 (35%), Gaps = 32/271 (11%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++     + +L  + +N++N +TVGF+  +V F +++    + +        
Sbjct: 1   MLRSMYSGISGMRGFQTKLDVIGNNIANVNTVGFKAGRVMFKDILSQTMSGVTPGTDDPS 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI---ILTRDG 104
                 Q    V+ G        GS + T    D  ++GD +F ++         LTR G
Sbjct: 61  GGVNAKQIGLGVSIGSIDTLHTPGSAMMTNNPRDLRIDGDGFFMVKLSEDQEVPFLTRAG 120

Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI----ATMGL 160
            F +    +LV++ G   +           +            I +         A +G+
Sbjct: 121 DFHIDVARNLVTSDGMLVLDSAGDPIQLDEEVTSFTIAQNGAIIQKMSDGTTEEGAIIGV 180

Query: 161 YSVDMSQGFVRRENSGISPNIPPTP------------LEDLSGVTVKRGFLEDSNANSMY 208
             +   +G  +   +     +   P              +     +  G LE SN +   
Sbjct: 181 AKIPNPEGLEKIGGNMYRVTLNAVPDGDLAAVMFEGNNAEEGTGAIIAGQLEMSNVDLTG 240

Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           E  +MI   + F + + +I  +++ + E + 
Sbjct: 241 EFSEMIVAQRGFQANSRIITTSDEVLQEVVN 271


>gi|322432975|ref|YP_004210224.1| flagellar basal-body rod protein FlgG [Acidobacterium sp. MP5ACTX9]
 gi|321165202|gb|ADW70906.1| flagellar basal-body rod protein FlgG [Acidobacterium sp. MP5ACTX9]
          Length = 263

 Score =  158 bits (400), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 50/262 (19%), Positives = 96/262 (36%), Gaps = 22/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +     +   A +  L  +A+N++N+ T GF+  ++ FS+++               
Sbjct: 1   MIRALYTAASGMTAQQLNLDNIANNLANSSTTGFQQRRLAFSDMLYQNTTSPGSAATQQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q    V        +  G F STG  LD A+ G  +F +  P      +R G F
Sbjct: 61  TNAAGLQVGLGVRPTSTETIQTQGDFNSTGNPLDLAISGGGFFQVLLPNGQTGYSRSGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
            +   G++V+A G      +   P            V      + +   I ++ +     
Sbjct: 121 HMDSTGNVVTADGNPLQPAITIPPDATNITIGSDGTVSVVQPGTTQSAQIGSIQMALFVN 180

Query: 166 SQGFVRRENS------GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
             G     N+           I  TP       T+++G LE SN + + E  +MI   + 
Sbjct: 181 PGGLNSVGNNIYLATTASGDPIIGTPGGSEGLGTIQQGTLEASNVSVVDEFVEMIVAQRS 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           + S + ++   ++ M + +  +
Sbjct: 241 YESNSRVVKAADEMMQQ-LNQL 261


>gi|138896905|ref|YP_001127358.1| flagellar basal-body rod protein [Geobacillus thermodenitrificans
           NG80-2]
 gi|134268418|gb|ABO68613.1| Flagellar basal-body rod protein [Geobacillus thermodenitrificans
           NG80-2]
          Length = 345

 Score =  158 bits (400), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 55/276 (19%), Positives = 106/276 (38%), Gaps = 37/276 (13%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTI---KVKFSEVVG----------- 46
           M        +  LA ++R+  + +N++N +T G++        F E++            
Sbjct: 70  MLRGLYTAASGMLAQQRRVDWLTNNLANAETPGYKADAGAMRAFPELLMNRLEDESIPSA 129

Query: 47  -----AIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFAL-------------EGDA 88
                  +  I    + V + +   +   G    TG   D AL              G  
Sbjct: 130 PPRAVPTQTAIGLLNTGVYTQELIPNFRQGDIKETGLSTDVALVDGQVPVDPTTGERGTL 189

Query: 89  WFALESPR-GIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGE 147
           +FA+E+ +     TR+G F ++ D  L +  G Y +        +I    E F V + G 
Sbjct: 190 FFAVENDQGETRYTRNGHFTLSPDDYLTTQDGWYVL---DGNGERIAIPSESFTVRDDGT 246

Query: 148 ISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-TVKRGFLEDSNANS 206
           I+ + + IA +G+      +  V+  N        P P    +    VK+GF+E SN + 
Sbjct: 247 ITAENRTIARLGVVFAANPKTVVKEGNGLFRSTDGPLPQAPGNVTYMVKQGFIERSNVDI 306

Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
              M  ++   + F +   +I   ++S+ +A+  + 
Sbjct: 307 ERTMTDLLAAYRAFEANQKIIQAYDRSLDKAVNEVG 342


>gi|54294165|ref|YP_126580.1| flagellar basal body rod protein FlgG [Legionella pneumophila str.
           Lens]
 gi|54297184|ref|YP_123553.1| flagellar basal body rod protein FlgG [Legionella pneumophila str.
           Paris]
 gi|148358808|ref|YP_001250015.1| flagellar basal body rod protein FlgG [Legionella pneumophila str.
           Corby]
 gi|296106853|ref|YP_003618553.1| flagellar basal-body rod protein FlgG [Legionella pneumophila
           2300/99 Alcoy]
 gi|53750969|emb|CAH12380.1| flagellar biosynthesis protein FlgG [Legionella pneumophila str.
           Paris]
 gi|53753997|emb|CAH15468.1| flagellar biosynthesis protein FlgG [Legionella pneumophila str.
           Lens]
 gi|148280581|gb|ABQ54669.1| flagellar basal body rod protein FlgG [Legionella pneumophila str.
           Corby]
 gi|295648754|gb|ADG24601.1| flagellar basal-body rod protein FlgG [Legionella pneumophila
           2300/99 Alcoy]
 gi|307609979|emb|CBW99508.1| flagellar biosynthesis protein FlgG [Legionella pneumophila 130b]
          Length = 261

 Score =  158 bits (400), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 47/261 (18%), Positives = 92/261 (35%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M+ +  +  +   A ++ ++T+A+N++N +T  F+  +  F +++               
Sbjct: 1   MEPALWVSKSGLEAQDKNIATIANNLANVNTTAFKKGRALFEDLIYQNLRQAGAQSSQNS 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                    + V           GS  +T   LD A+EG  +F +  P G    TRDG F
Sbjct: 61  QIPTGINMGTGVHLVATEKIFSQGSLQNTQNALDVAIEGRGFFTVLMPDGTQAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           K    G +V+++G     ++   P            V      +    VI  + L     
Sbjct: 121 KTDSTGQIVNSNGYPLQPNITIPPQTTKITIGTDGTVSALVAGNNAPSVIGNIQLTDFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +  +  +        +       T+ +G LE SN N + E+  MI   + +
Sbjct: 181 PAGLQPIGQNLYTETVASGTPITDNPGNSGLGTLLQGSLEASNVNVVEELVNMIQAQRSY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
                 I   +  +    + +
Sbjct: 241 EITAKSIQTVDSMLQYLTQTL 261


>gi|288553056|ref|YP_003424991.1| flagellar basal body rod protein FlgG [Bacillus pseudofirmus OF4]
 gi|288544216|gb|ADC48099.1| flagellar basal body rod protein FlgG [Bacillus pseudofirmus OF4]
          Length = 279

 Score =  158 bits (400), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 53/266 (19%), Positives = 102/266 (38%), Gaps = 27/266 (10%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G++     + +L  + +N+SN +T GF+  +  FS++V               
Sbjct: 11  MLRSMYSGISGMRNFQTKLDVIGNNISNVNTAGFKKGRTTFSDMVSQQIAGASGPVVNGR 70

Query: 49  -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA---LESPRGIILTRDG 104
              +  Q                GS  +T   LD  + G+ +F     E+      +R G
Sbjct: 71  GGTNPRQVGLGSQLATIDTIHTQGSLQNTNRSLDLGISGNGYFRLSDSETGGTTYYSRAG 130

Query: 105 RFKVTDDGSLVSASGKYPVLD-MASVPIQIPQKDEIFNVGEKGEISQKGKV-----IATM 158
            F + +DG +V+A+G Y + D      IQI    + F++G+ G ++            T+
Sbjct: 131 NFYLDEDGYIVNANGLYLLDDSDPGSRIQIAPDSQSFSIGQAGVVNVIDSAGQLTSPGTI 190

Query: 159 GLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQM 213
            L      +G  +  ++           +     +     +  G LE SN +   E  +M
Sbjct: 191 SLAYFSNPEGLQKEGDNLYQVTDNSGAAQRTTPTNDGTGALVAGTLEMSNVDLSEEFTEM 250

Query: 214 IHLTQKFNSITTLIDENEKSMLEAIR 239
           I   + F + T +I  +++ + E + 
Sbjct: 251 IVAQRGFQANTRIITTSDEILQELVN 276


>gi|225181585|ref|ZP_03735026.1| flagellar basal body rod protein [Dethiobacter alkaliphilus AHT 1]
 gi|225167693|gb|EEG76503.1| flagellar basal body rod protein [Dethiobacter alkaliphilus AHT 1]
          Length = 251

 Score =  158 bits (400), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 49/255 (19%), Positives = 95/255 (37%), Gaps = 18/255 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA------------I 48
           M        +  +    R  T+ +N++N++T GF+                        +
Sbjct: 1   MIRGLYTAASGMMVESTRQETITNNLANSETTGFKRDLALQRSHGEQPVVRLGDRQPFGV 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
           +  I            + S E GS   TG +LD A+ GD +F +E+ +G+  TR+G F +
Sbjct: 61  RPVIGSLGVGSLIDGIHTSHEQGSLQETGRDLDVAMAGDGYFVVETEQGLRYTRNGAFSI 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
             D  LV+  G   +         +        + + G +     +   +   S   +  
Sbjct: 121 DADRMLVNDQGHRVM----GTTGPLQLPAGEVQIDQAGNVFVNDAMQGQLARVSFADNSE 176

Query: 169 FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228
             +  +S           +      VK+GFLE SN  ++ EM QM+   + + +   ++ 
Sbjct: 177 LQKVGDSLF--TAAEGAEQQPVTGMVKQGFLEGSNVQAVQEMVQMLAAMRAYETNQRVVQ 234

Query: 229 ENEKSMLEAIRNIAS 243
             +  + +A   IA+
Sbjct: 235 AQDDMLRKATNEIAA 249


>gi|167576664|ref|ZP_02369538.1| flagellar basal body rod protein FlgG [Burkholderia thailandensis
           TXDOH]
          Length = 258

 Score =  158 bits (400), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 49/251 (19%), Positives = 90/251 (35%), Gaps = 20/251 (7%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID----------- 53
             I      A + +L  VA+N++N +TVGF+  +V F ++   ++               
Sbjct: 1   MWISKTGLQAQDAKLQAVANNLANVNTVGFKRDRVVFEDLFYRVERQPGAQLDQDNASPS 60

Query: 54  --QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTD 110
             Q  S             GS  +TG  LD A+ G  +  +    G    TR G+  +  
Sbjct: 61  GIQMGSGTRIVGTQKVFTDGSVQTTGRSLDVAVTGKGFLQVLMANGETGYTRAGQLSINA 120

Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169
           +G LV+A G     +++           E   V      +     +  + L +     G 
Sbjct: 121 EGLLVNAQGLPLQPEISIPENATDIAIGENGIVAATMPGASSPSEVGQLQLANFVNPAGL 180

Query: 170 VRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224
           +   ++     +   P  +    T     +K+G LE SN   + EM  MI   + +   T
Sbjct: 181 LALGDNLYMETVASGPPNEGEAGTDVFGKIKQGALEGSNVQVVEEMVDMIAAQRTYEMNT 240

Query: 225 TLIDENEKSML 235
            ++   +  + 
Sbjct: 241 KVLSAADNMLQ 251


>gi|319403961|emb|CBI77549.1| Flagellar basal-body rod protein flgG [Bartonella rochalimae ATCC
           BAA-1498]
 gi|319406976|emb|CBI80613.1| Flagellar basal-body rod protein flgG [Bartonella sp. 1-1C]
          Length = 264

 Score =  158 bits (400), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 43/262 (16%), Positives = 91/262 (34%), Gaps = 21/262 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55
             S +I      A +  L  +A+NM+N +T GF+  + +F++++      +         
Sbjct: 3   MKSLSIAATGMAAQQTNLDVIANNMANINTTGFKRGRAEFADLMYVADRAVGVPNMLNQA 62

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                      V +         G+F+ TG  LD A+ G+ WF ++ P   +  TR G F
Sbjct: 63  VIPEGAMIGMGVRTAAVRTINTQGAFVQTGNALDLAINGNGWFEIQDPNGNVFYTRSGAF 122

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-IATMGLYSVDM 165
            +++ G +V+  G      +                      +    V      L +   
Sbjct: 123 NLSETGQIVTLEGNLVQPVITIPIGSKNVTVSPDGTVYYQTDTDPNAVEAGRFRLVNFVN 182

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++                      ++ +  LE SN + + EM ++I   + +
Sbjct: 183 EVGLEPIGDNLFRETQASGAPVPGDPKEDGYGSIMQAMLEASNVDPVKEMTELIAAQRSY 242

Query: 221 NSITTLIDENEKSMLEAIRNIA 242
              + +I  +++      +N+ 
Sbjct: 243 EMNSKVIQASDEMAAVVSKNLR 264


>gi|188579867|ref|YP_001923312.1| flagellar basal body rod protein FlgG [Methylobacterium populi
           BJ001]
 gi|179343365|gb|ACB78777.1| flagellar basal-body rod protein FlgG [Methylobacterium populi
           BJ001]
          Length = 262

 Score =  158 bits (400), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 46/256 (17%), Positives = 88/256 (34%), Gaps = 21/256 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55
             +  I      A +  L  +A+N++N +T GF+  + +F++++   +            
Sbjct: 1   MRALAIAATGMSAQQLNLEVIANNIANLNTTGFKGARAEFTDLLYQAERQQGAPNQAGQE 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                      V +         GS  +TG +LD A+ G  +F + SP G I  TR G F
Sbjct: 61  AVPEGAMLGLGVRAAAIRNLHRQGSLANTGNQLDLAVNGRGYFQITSPAGEINYTRAGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE-KGEISQKGKVIATMGLYSVDM 165
              + G LV+  G      +                   K +     + I  + L +   
Sbjct: 121 NKNNAGQLVTMEGYAVDPAILIPANTTQVTINESGQVFAKTDGQVALQNIGQLTLANFAN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLS-----GVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     N               +        +++G+LE SN + + E+  +I   + F
Sbjct: 181 ESGLEPLGNGLYRETPASGAPVVGNPGDVSYGKLQQGYLEGSNVDPVKEITSLITAQRAF 240

Query: 221 NSITTLIDENEKSMLE 236
              + +I   ++    
Sbjct: 241 EMNSKVIQAADEMAGT 256


>gi|323498418|ref|ZP_08103414.1| flagellar basal body rod protein FlgG [Vibrio sinaloensis DSM
           21326]
 gi|323316491|gb|EGA69506.1| flagellar basal body rod protein FlgG [Vibrio sinaloensis DSM
           21326]
          Length = 262

 Score =  158 bits (400), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 46/262 (17%), Positives = 94/262 (35%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +  +      A +  +ST+++N++N  TVG++  +  F ++     N    +     
Sbjct: 1   MHPALWVSKTGLDAQQTNISTISNNLANASTVGYKKSRAVFEDLFYQNINQPGGQSSQNT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    +             G+  +T   LD  +EGD +F +  P   I  +R+G+F
Sbjct: 61  ELPTGLMLGAGSKVVATQKVHTQGNTQTTNNSLDMMIEGDGFFQILMPDGNIGYSRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD--EIFNVGEKGEISQKGKVIATMGLYSVD 164
            V D+G++V++   Y +     +P             V  +    Q   V+  +      
Sbjct: 121 TVNDEGAIVTSGAGYGLEPEIVIPEDAISITVGTDGEVSVRIRGEQNNVVVGQITTVDFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +   P       ++          +++  LE SN N   E+  MI   + 
Sbjct: 181 NPGGLEPIGQNLYLPTGASGDPQEGVPGFDGFGDIRQSMLETSNVNVTEELVNMIEAQRV 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   +K M    + +
Sbjct: 241 YEMNSKVISAVDKMMSFVNQQL 262


>gi|315125986|ref|YP_004067989.1| flagellar basal-body rod FlgG [Pseudoalteromonas sp. SM9913]
 gi|315014500|gb|ADT67838.1| flagellar basal-body rod FlgG [Pseudoalteromonas sp. SM9913]
          Length = 261

 Score =  158 bits (400), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 44/261 (16%), Positives = 100/261 (38%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M ++  +      A + R++T+++N++N  T GF+  +  F ++   ++           
Sbjct: 1   MNSALWVSKTGLAAQDLRMTTISNNLANVSTAGFKKDRAVFEDLFYQVQKQPGAQVDELN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           GSF +T  +LD A+ G  +F +ESP G  + TR+G+F
Sbjct: 61  QLPSGIQVGTGVRINGTQKQFTEGSFETTSNQLDVAIAGQGFFQIESPDGELLFTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           ++  +  LV+++G     ++A               V        +   +  M   +   
Sbjct: 121 QLNSESLLVNSNGLPLAQNIALPEGTTKVSIGTDGTVTAVVGKDAQAVELGQMLTVNFAN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +            +      +   +++  +E SN + + EM  MI + + +
Sbjct: 181 PAGLQSLGGNLYRETAASGEPVEGIPGEDAFGGLQQFTIEGSNVSVVDEMVSMIAVQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
                ++   ++ +    +N+
Sbjct: 241 EMNAKVVSAADEMLRFINQNV 261


>gi|254292905|ref|YP_003058928.1| flagellar basal body rod protein FlgG [Hirschia baltica ATCC 49814]
 gi|254041436|gb|ACT58231.1| flagellar basal-body rod protein FlgG [Hirschia baltica ATCC 49814]
          Length = 261

 Score =  158 bits (400), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 41/259 (15%), Positives = 91/259 (35%), Gaps = 21/259 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             + +       A +  +  +++N++N +T G++  + +F +++      +         
Sbjct: 1   MRALSTAATGMQAQQLNVEVISNNIANMNTTGYKRQRAEFQDLLYTNMEKMGVSSSDANT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V +G  Y   E G    T    D A++GD +F ++ P      TR G F
Sbjct: 61  IVPTGVQIGTGVKAGSVYRITEQGPVQQTSNSYDVAMQGDGYFIVQLPDGRDAYTRAGNF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-IATMGLYSVDM 165
            V  DG +V+  G      +      +                      +  + L     
Sbjct: 121 SVNGDGQIVTEDGYTVSPGINVPEDTLSVTINAQGTVTATTAGATDPTDLGALELARFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++ +   +                T+ +GFLE SN N++ E+  +I+  + +
Sbjct: 181 PAGLDAIGDNLLLETVASGAANVGQAGALGFGTILQGFLETSNVNAVTEISALINAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              + +I   ++ +    +
Sbjct: 241 EMNSKVITATDEMLQTTSQ 259


>gi|300024616|ref|YP_003757227.1| flagellar basal-body rod protein FlgF [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299526437|gb|ADJ24906.1| flagellar basal-body rod protein FlgF [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 240

 Score =  158 bits (400), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 78/242 (32%), Positives = 130/242 (53%), Gaps = 4/242 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           MQ++  +GL+AQLAL++RL TVA+N++N  T G+R  ++ F EV+          +SFV+
Sbjct: 1   MQSNIYVGLSAQLALQRRLDTVANNVANAGTAGYRAEQMSFEEVLSKSG---QTAVSFVS 57

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
            G+ +LS E G    T   LD A+ GDAW A+++P G   TRDGR ++  DG +++    
Sbjct: 58  QGRTHLSTEGGEITQTDNPLDIAVRGDAWLAIQTPTGPAYTRDGRMQMRADG-VLTNLSG 116

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
            P LD    P+Q+        + + G I Q G  +   GLY +       R   + +  +
Sbjct: 117 DPFLDAGGSPVQLDPDGGRITINKAGTIVQDGNNLGAFGLYRMPQGANLTRGHGASVITD 176

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
               P  D     V +G++E SN N + EM  +  L + F++++ ++ E E S+ ++++ 
Sbjct: 177 QAAVPEIDFLRTGVVQGYVEKSNVNPILEMTHLTTLQRSFDAVSNVLRETESSLQDSLKT 236

Query: 241 IA 242
           IA
Sbjct: 237 IA 238


>gi|332298513|ref|YP_004440435.1| flagellar basal-body rod protein FlgF [Treponema brennaborense DSM
           12168]
 gi|332181616|gb|AEE17304.1| flagellar basal-body rod protein FlgF [Treponema brennaborense DSM
           12168]
          Length = 265

 Score =  158 bits (400), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 54/264 (20%), Positives = 101/264 (38%), Gaps = 24/264 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKND------ 51
           M   + IG +   A + RL  +++N++N DT  ++        F E++    ND      
Sbjct: 1   MVRGWYIGSSGMNAQQNRLDAISNNLANADTTAYKRDVTVSKSFPELLMRRMNDDGVYRT 60

Query: 52  ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101
                     + +    V + + Y   E GSF  T ++ D AL G+ +FA+++P G   T
Sbjct: 61  PFGSADAAPIVGKIGLGVETNELYTDFEQGSFKQTSSKADMALSGEGFFAVQTPAGERYT 120

Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLY 161
           R+G F +  +G L +  G   +    +  I++       N       +   ++I    + 
Sbjct: 121 RNGNFMIGKEGILETKEGYPVLG--ENGYIRVNDDSFTVNPDGMIYSADDMELIDRFKVV 178

Query: 162 SVDMSQGFVRRENSGISPNI---PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
             D  +   +  +S              E        +G+ E SN N + EM  MI + +
Sbjct: 179 RFDNERYLQKMGSSLYKNTDISGEAYIAEGKERPAFIQGYTETSNVNVVNEMVSMIEVNR 238

Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242
            + +    I   +  M      +A
Sbjct: 239 AYEANQKTIQTEDTMMSTLWGKVA 262


>gi|260437439|ref|ZP_05791255.1| flagellar basal-body rod protein FlgG [Butyrivibrio crossotus DSM
           2876]
 gi|292810071|gb|EFF69276.1| flagellar basal-body rod protein FlgG [Butyrivibrio crossotus DSM
           2876]
          Length = 284

 Score =  158 bits (399), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 53/283 (18%), Positives = 102/283 (36%), Gaps = 43/283 (15%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--------- 51
           M  +     +  +A +  +  +++N++N ++ G++    +F  ++               
Sbjct: 1   MMRALYTAASGMIAQQTNVDVISNNLANVNSTGYKASTAEFKSLLYQTLQSRSTSANGDD 60

Query: 52  ---IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFK 107
                Q  +   +         GS I + +   F LEGD  F L +P   I+ TR+G F 
Sbjct: 61  KPIPAQVGTGARTAAITTHFSQGSLIDSTSTFAFGLEGDGLFGLMNPDGEIVYTRNGDFT 120

Query: 108 ---VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI--------- 155
                D G ++ +S  YPV+D    PIQ   + ++ N+    + S   +VI         
Sbjct: 121 VGKTNDGGFMICSSDGYPVVDSDGNPIQFSGEYDVSNLVITSDGSFYYRVIEEKPDENGN 180

Query: 156 -----------ATMGLYSVDMSQGFVRRENSGISPN-IPPTPLEDLSG-----VTVKRGF 198
                        MG++      G     +S           +E+ +        V +G 
Sbjct: 181 MHKTERLDDLETRMGVFQFTNPSGLDSIGSSLYKETEASGIAMEEGTYTELKRTKVCQGR 240

Query: 199 LEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           LE SN     EM  +I   + +   +  I   +  + +A   +
Sbjct: 241 LEASNVQVADEMVNLIVAQRAYEMNSKAIQAADDMLGQA-NQL 282


>gi|149188068|ref|ZP_01866363.1| polar flagellar FlgG [Vibrio shilonii AK1]
 gi|148838056|gb|EDL54998.1| polar flagellar FlgG [Vibrio shilonii AK1]
          Length = 262

 Score =  158 bits (399), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 45/262 (17%), Positives = 96/262 (36%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +  +      A +  +ST+++N++N  T+G++  +  F ++     N    +     
Sbjct: 1   MHPALWVSKTGLDAQQTNISTISNNLANASTIGYKKSRAVFEDLFYQNINQPGGQSSQNT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    +             G+  +T   LD  +EGD +F +  P   I  +R+G+F
Sbjct: 61  ELPSGLMLGAGSKVVATQKIHTPGNAQTTTNSLDMMIEGDGFFQVLMPDGNIGYSRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD--EIFNVGEKGEISQKGKVIATMGLYSVD 164
            + D+G++V++   Y +    ++P             V  +    Q  +V+  +      
Sbjct: 121 TLNDEGTIVTSGSGYALEPEIAIPEDAISITVGTDGEVSVRVRGQQDNQVVGNITTVDFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +   P        +          +++  LE SN N   E+  MI   + 
Sbjct: 181 NPGGLEPIGQNLYLPTGASGDPNEGVPGLDGFGQIRQSMLETSNVNVTEELVNMIEAQRV 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   +K M  A + +
Sbjct: 241 YEMNSKVISSVDKMMSFANQQL 262


>gi|86146153|ref|ZP_01064479.1| polar flagellar FlgG [Vibrio sp. MED222]
 gi|218708806|ref|YP_002416427.1| flagellar basal body rod protein FlgG [Vibrio splendidus LGP32]
 gi|85836100|gb|EAQ54232.1| polar flagellar FlgG [Vibrio sp. MED222]
 gi|218321825|emb|CAV17796.1| Flagellar basal-body rod protein flgG [Vibrio splendidus LGP32]
          Length = 262

 Score =  158 bits (399), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 46/262 (17%), Positives = 94/262 (35%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +  +      A +  +ST+++N++N  T+GF+  +  F ++     N    +     
Sbjct: 1   MHPALWVSKTGLDAQQTNISTISNNLANASTIGFKKSRAVFEDLFYQNINQPGGQSSQNT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                    +             G+  +T   LD  +EGD +F +E P G    +R+G+F
Sbjct: 61  ELPSGLMLGAGSKVVATQKVHTHGNAQTTSNSLDMMIEGDGFFQVEMPDGETGYSRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG--EISQKGKVIATMGLYSVD 164
            +  DG++V++   Y +     +P          +          Q   V+  + +    
Sbjct: 121 TLNGDGAIVTSGQGYALQPEIVIPEDAISVTVGNDGEVSVRLRGQQDNVVVGQITITDFV 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +   P       ++          V++  LE SN N   E+  MI   + 
Sbjct: 181 NPGGLEPIGQNLYLPTGASGDPQEGVPGLNGLGNVRQSMLEASNVNVTEELVNMIEAQRV 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   +K M    + +
Sbjct: 241 YEMNSKVISAVDKMMSFVNQQL 262


>gi|296122947|ref|YP_003630725.1| flagellar basal-body rod protein FlgG [Planctomyces limnophilus DSM
           3776]
 gi|296015287|gb|ADG68526.1| flagellar basal-body rod protein FlgG [Planctomyces limnophilus DSM
           3776]
          Length = 266

 Score =  158 bits (399), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 48/262 (18%), Positives = 92/262 (35%), Gaps = 23/262 (8%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------- 55
            +     +   A    L T+A+N++N  T GF+  +  F ++          +       
Sbjct: 4   RAMYTAASGMQAYMFNLDTIANNLANAGTNGFKRSRTDFEDLYYQYYKLPGTQDTLGNYT 63

Query: 56  ------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109
                    V      +    G+ + TG +LD A+ GD +F +     +  TR G F V 
Sbjct: 64  PIGTAAGLGVRVAGTQIDFSQGALLETGRQLDMAITGDGFFMVRGNNQLFYTRRGEFTVN 123

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG----KVIATMGLYSVDM 165
            +G +V AS     L    + I     D   +      + Q G      +  + L     
Sbjct: 124 SNGDVVLASADIGRLIDPPINIPPDTVDIGISAEGIVSVIQAGSTVQNQVGQIQLARFIN 183

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
            +G  +   S  +           +        +++GFLE SN     E+  +I   +  
Sbjct: 184 PEGLYQAGESLYAVTDASGQPLISNPGDQGLGLIRQGFLEISNVEPANELVDLIKTQRNV 243

Query: 221 NSITTLIDENEKSMLEAIRNIA 242
              + +I  +++ + + I N+ 
Sbjct: 244 ELNSQVIQASDQLL-QLITNLR 264


>gi|146278638|ref|YP_001168797.1| flagellar basal body rod protein FlgF [Rhodobacter sphaeroides ATCC
           17025]
 gi|145556879|gb|ABP71492.1| Flagellar hook protein FlgE-like protein [Rhodobacter sphaeroides
           ATCC 17025]
          Length = 239

 Score =  158 bits (399), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 62/242 (25%), Positives = 107/242 (44%), Gaps = 6/242 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    L  Q  L + + ++A+N++N  T GFR   V F+E V  +  D +  +S  +
Sbjct: 1   MDAAGYTTLTRQSGLMREMQSIANNIANLSTTGFRREGVVFTEHVKRL--DGEASLSMAS 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           +   ++    G    TG   DFA+ GD +F +E+P+G  LTR G F    +G LV   G 
Sbjct: 59  ASARHVDLSQGGLTHTGATFDFAIMGDGFFLIETPQGEHLTRAGSFTPDAEGELVDMDGN 118

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
              LD    P+ IP       +   G +S  G+ I  +GL+             +  S  
Sbjct: 119 RL-LDEGGAPVFIPPDARDVVLASDGTLSSGGQPIGRIGLWQPTEPLDLRHEGGTRFSAE 177

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
               P    +G ++ +G LE+SN   + E+ +MI + + +      +D  +  +   +R 
Sbjct: 178 AGVEP---AAGASLIQGSLEESNVAPISEISRMIEVQRAYELGQGFLDREDDRIRNTVRI 234

Query: 241 IA 242
           + 
Sbjct: 235 LG 236


>gi|84388093|ref|ZP_00990989.1| Flagellar basal body rod protein FlgG [Vibrio splendidus 12B01]
 gi|84377160|gb|EAP94030.1| Flagellar basal body rod protein FlgG [Vibrio splendidus 12B01]
          Length = 262

 Score =  158 bits (399), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 45/262 (17%), Positives = 94/262 (35%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +  +      A +  +ST+++N++N  T+GF+  +  F ++     N    +     
Sbjct: 1   MHPALWVSKTGLDAQQTNISTISNNLANASTIGFKKSRAVFEDLFYQNINQPGGQSSQNT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                    +             G+  +T   LD  +EGD +F +E P G    +R+G+F
Sbjct: 61  ELPSGLMLGAGSKVVATQKVHTHGNAQTTSNSLDMMIEGDGFFQVEMPDGETGYSRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG--EISQKGKVIATMGLYSVD 164
            +  DG++V++   Y +     +P          +          Q   V+  + +    
Sbjct: 121 TLNGDGAIVTSGQGYALQPEIVIPEDAISVTVGNDGEVSVRLRGEQNNVVVGQITITDFV 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +   P       ++          +++  LE SN N   E+  MI   + 
Sbjct: 181 NPGGLEPVGQNLYLPTGASGDPQEGVPGFDGLGNIRQSMLETSNVNVTEELVNMIEAQRV 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   +K M    + +
Sbjct: 241 YEMNSKVISSVDKMMSFVNQQL 262


>gi|329849714|ref|ZP_08264560.1| flagellar basal-body rod protein FlgG [Asticcacaulis biprosthecum
           C19]
 gi|328841625|gb|EGF91195.1| flagellar basal-body rod protein FlgG [Asticcacaulis biprosthecum
           C19]
          Length = 263

 Score =  158 bits (399), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 91/259 (35%), Gaps = 21/259 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             +         A +  +  +++N++N +TVGF+  + +F +++      +         
Sbjct: 1   MRALRTATTGMAAQQLNVEVISNNIANMNTVGFKKQRAEFQDLLYQNIERMGSQSSDAGT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V +G  Y   + GS   T  + D A+EG  +F +  P      TR G F
Sbjct: 61  VVPTGIQVGAGVKAGSVYRIMQQGSMTLTQNQYDVAIEGKGYFQILMPSGETAYTRAGNF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
            V D G LV+  G      +      I         +    +       +  +   +   
Sbjct: 121 SVDDQGRLVTEDGYLVQPSVTIPQDAIDVSISKTGQIQATQQGQTAPTTVGQLQTATFFN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++    +                 T+ +G+ E SN +++ E+  +I   + +
Sbjct: 181 EAGLDAIGDNLFLESGASGAPNVSTPGDVGFGTLLQGYTEASNVDAVGEITALIVAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              + +I   ++ +  A +
Sbjct: 241 EMNSKVITTADQMLQTASQ 259


>gi|83944162|ref|ZP_00956618.1| flagellar basal-body rod protein FlgG [Sulfitobacter sp. EE-36]
 gi|83845029|gb|EAP82910.1| flagellar basal-body rod protein FlgG [Sulfitobacter sp. EE-36]
          Length = 261

 Score =  158 bits (399), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 46/261 (17%), Positives = 95/261 (36%), Gaps = 22/261 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ------- 54
             +  I     LA +  +  +A+N++N +T GF++ +  F ++V                
Sbjct: 1   MKALGIAATGMLAQQTNVDVIANNIANANTTGFKSGRAAFQDLVYQSFASAGSLTSEEGT 60

Query: 55  -------KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                      V +         G  I T  +LD A+EG  +F +  P G    TRDG F
Sbjct: 61  ARPVGTDIGLGVQAAGVIRHNIQGGLIQTENQLDLAIEGRGYFTVNRPDGTQAFTRDGNF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVP-IQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +++ +G LV+ +G      +      +  + ++   V    E   +   +  +   +   
Sbjct: 121 QLSAEGQLVTLNGYEVEPAIIVPELTRQVEINQEGVVMAYVENDPEPVELGQLNFATFLN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++ +               T      ++G+LE SN N + ++  +I   + +
Sbjct: 181 EAGLKPVGDNLMEQTAASGEPVQNVPGTPGVGITRQGYLEQSNVNIIQQITDLISAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
              +  I+  ++ M      I
Sbjct: 241 EMNSKAIETADQIM-TTTNQI 260


>gi|52841453|ref|YP_095252.1| flagellar basal body rod protein FlgG [Legionella pneumophila
           subsp. pneumophila str. Philadelphia 1]
 gi|52628564|gb|AAU27305.1| flagellar basal body rod protein FlgG [Legionella pneumophila
           subsp. pneumophila str. Philadelphia 1]
          Length = 261

 Score =  158 bits (399), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 47/261 (18%), Positives = 92/261 (35%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M+ +  +  +   A ++ ++T+A+N++N +T  F+  +  F +++               
Sbjct: 1   MEPALWVSKSGLEAQDKNIATIANNLANVNTTAFKKGRALFEDLIYQNLRQAGAQSSQNS 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                    + V           GS  +T   LD A+EG  +F +  P G    TRDG F
Sbjct: 61  QIPTGINMGTGVHLVATEKIFSQGSLQNTQNALDVAIEGRGFFTVLMPDGTQSYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           K    G +V+++G     ++   P            V      +    VI  + L     
Sbjct: 121 KTDSTGQIVNSNGYPLQPNITIPPQTTKITIGTDGTVSALVAGNNAPSVIGNIQLTDFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +  +  +        +       T+ +G LE SN N + E+  MI   + +
Sbjct: 181 PAGLQPIGQNLYTETVASGTPITDNPGNSGLGTLLQGSLEASNVNVVEELVNMIQAQRSY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
                 I   +  +    + +
Sbjct: 241 EITAKSIQTVDSMLQYLTQTL 261


>gi|217976225|ref|YP_002360372.1| flagellar basal body rod protein FlgG [Methylocella silvestris BL2]
 gi|217501601|gb|ACK49010.1| flagellar basal-body rod protein FlgG [Methylocella silvestris BL2]
          Length = 262

 Score =  158 bits (399), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 43/262 (16%), Positives = 92/262 (35%), Gaps = 21/262 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----------- 50
             + +I      A +  ++ +A+N++N +T GF+  + +F++++   +            
Sbjct: 1   MKALSIAATGMAAQDLNVAVIANNIANINTTGFKRARAEFTDLLYQAERLQGVSSRGQSN 60

Query: 51  ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106
              +  Q    V +         G+  +TG +LD+AL G  WF +       + TR G F
Sbjct: 61  TIPEGAQLGLGVRTASIRNLHIQGTLTNTGNKLDWALNGRGWFQVTDANGDTVYTRAGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
                G +V++ G      M      +     +   V          + +  + L +   
Sbjct: 121 NTNGTGQIVTSDGYIVSPTMIVPTNAVDVTVSQSGMVSATLSGQPAPQQLGQISLANFAN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     N+                      TV + +LE SN + + E+  +I   + +
Sbjct: 181 EAGLTPLGNNLYRQTEASGSPIVGVPGDPGFATVSQSYLESSNVDPVKEITDLIAAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNIA 242
              + +I    +      +N+ 
Sbjct: 241 EMNSKVIQAASEMESTVSKNMG 262


>gi|260429403|ref|ZP_05783380.1| flagellar basal-body rod protein FlgG [Citreicella sp. SE45]
 gi|260420026|gb|EEX13279.1| flagellar basal-body rod protein FlgG [Citreicella sp. SE45]
          Length = 261

 Score =  158 bits (398), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 97/259 (37%), Gaps = 21/259 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             +  I      A + R+  +++N+SN  T G+   + +F+++                 
Sbjct: 1   MRALKIAATGMSAQQMRVEVISNNLSNMSTTGYNARRAEFADLHYQQIARAGTINASDGT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                 Q           +  E G+   TG +LD A+EG  +F +  P GI   TRDG  
Sbjct: 61  MLPTGVQMGLGARPAAVTMKLEQGALSDTGGDLDIAIEGRGYFEVTLPSGIAGYTRDGAL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           K   DG +V++ G     ++      I         V      + + +++    +     
Sbjct: 121 KRNADGMIVTSDGLPVSPEIVIPDDAISLSINAEGEVYAYFADAVQAQLLGQFTIVGFTN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
            +G      +  +      P            T ++G+LEDS+ + +YE+ ++I   + +
Sbjct: 181 PKGLEAIGGNLFTETEASGPPIQTTAGQEGLGTFRQGYLEDSSVDPVYEITELIEAQRGY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              + +I   ++ +   ++
Sbjct: 241 ELNSKVISAADQMLGATVQ 259


>gi|83955138|ref|ZP_00963794.1| flagellar basal-body rod protein FlgG [Sulfitobacter sp. NAS-14.1]
 gi|83840467|gb|EAP79640.1| flagellar basal-body rod protein FlgG [Sulfitobacter sp. NAS-14.1]
          Length = 261

 Score =  158 bits (398), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 46/261 (17%), Positives = 96/261 (36%), Gaps = 22/261 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ------- 54
             +  I     LA +  +  +A+N++N +T GF++ +  F ++V                
Sbjct: 1   MKALGIAATGMLAQQTNVDVIANNIANANTTGFKSGRAAFQDLVYQSFASAGSLTSEEGT 60

Query: 55  -------KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                      V +         G  I T  +LD A+EG  +F +  P G    TRDG F
Sbjct: 61  ARPVGTDIGLGVQAAGVIRHNIQGGLIQTENQLDLAIEGRGYFTVNRPDGTQAFTRDGNF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVP-IQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +++ +G LV+ +G      +      +  + ++   V    E + +   +  +   +   
Sbjct: 121 QLSAEGQLVTLNGYEVEPAIIVPELTRQVEINQEGVVMAYVENAPEPVELGQLNFATFLN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++ +               T      ++G+LE SN N + ++  +I   + +
Sbjct: 181 EAGLKPVGDNLMEQTAASGEPVQNVPGTPGVGITRQGYLEQSNVNIIQQITDLISAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
              +  I+  ++ M      I
Sbjct: 241 EMNSKAIETADQIM-TTTNQI 260


>gi|209963565|ref|YP_002296480.1| flagellar basal-body rod protein FlgG [Rhodospirillum centenum SW]
 gi|209957031|gb|ACI97667.1| flagellar basal-body rod protein FlgG [Rhodospirillum centenum SW]
          Length = 261

 Score =  158 bits (398), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 35/259 (13%), Positives = 94/259 (36%), Gaps = 21/259 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             + NI     +A +  +  +++N++N +TVGF+  + +F +++   +            
Sbjct: 1   MRTLNIAATGMMAQQLNVEVISNNIANLNTVGFKRSRAEFQDLMYQAQVRPGSESSDQDT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q    V           G    T  + D AL+G  +F +  P      TR G F
Sbjct: 61  IVPAGIQLGLGVKPAAVSRMHGQGPLTPTENDYDVALDGRGYFVITLPNGDTAYTRAGNF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +++ +G++V+  G     ++      +    +    V    +   + + +    + +   
Sbjct: 121 QLSPEGTIVTVDGYTVSPNITVPDNTRKVAINRNGEVLAFIDGQTEPENVGQFEVATFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++                       +++G++E +N N + E+  +I   + +
Sbjct: 181 EAGLEAMGDNLFRETPASGIPILGIPGQLGYGGIRQGYVEAANVNIVQEITSLISAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              + +++  ++ +    +
Sbjct: 241 EMNSRVVEAGDQMLNTVTQ 259


>gi|110677663|ref|YP_680670.1| flagellar basal body rod protein FlgG [Roseobacter denitrificans
           OCh 114]
 gi|109453779|gb|ABG29984.1| flagellar basal-body rod protein FlgG [Roseobacter denitrificans
           OCh 114]
          Length = 261

 Score =  158 bits (398), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 97/259 (37%), Gaps = 21/259 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             +  I      A + R+ T+++N+SN  T G+   + +F+++     +           
Sbjct: 1   MRALKIAATGMSAQQMRVETISNNLSNMSTTGYNARRAEFADLHYQQMSRPGTVNATDGT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q    V      +  + GS  +TG +LD A+EG  +  +  P      TRDG  
Sbjct: 61  VLPTGVQLGLGVRPSAVSVQLQQGSLSATGGDLDLAIEGTGFLEVTLPSGQTAYTRDGGL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           K   +G +V++ G     ++      +    +    V      +   +++    L     
Sbjct: 121 KRDAEGLIVTSDGYPVEPEIVIPDDARSISINTSGEVFAYFSDATDAELLGQFNLAGFTN 180

Query: 166 SQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
           ++G      +  +              +    TV++G+LE S+ +++ E+ ++I   + +
Sbjct: 181 AKGLEALGGNLFAETEASGAAIVSTPGEDGLGTVRQGYLESSSVDAVREITELIEAQRGY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
                +I   ++ M    +
Sbjct: 241 EMNAKVISAADQMMGATTQ 259


>gi|149911700|ref|ZP_01900308.1| Flagellar basal body rod protein FlgG [Moritella sp. PE36]
 gi|149805230|gb|EDM65247.1| Flagellar basal body rod protein FlgG [Moritella sp. PE36]
          Length = 262

 Score =  158 bits (398), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 42/262 (16%), Positives = 90/262 (34%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +  I      A +  +ST+++N++N  TVGF+  +  F +++    N    +     
Sbjct: 1   MNPALWISKTGLEAQQANISTISNNLANASTVGFKKERAIFEDLLYQAINQPGGQSSQNT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                    S             G+ ++T   LD  + G  +F +E P G    TR+G+F
Sbjct: 61  KLPSGLMVGSGARVVATQKDHSQGNMLTTDNSLDLMVSGRGFFEIEMPDGTTSYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG--EISQKGKVIATMGLYSVD 164
            + D+G +V+    YP+     +P          +             + +  + +    
Sbjct: 121 TLNDEGIIVTPGSGYPLQPQIQIPADAQTITVSEDGEVSVSLPGQTNNQTVGQINISDFV 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +                       + +G +E SN N   E+  +I   + 
Sbjct: 181 NPGGLQPIGQNMYIQTGASGDPVQGLPSNEGLGKLVQGAIETSNVNVTEELVNLIESQRV 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   ++ +    + +
Sbjct: 241 YEMNSKVISAVDEMLSYINQQL 262


>gi|146305252|ref|YP_001185717.1| flagellar basal-body rod protein FlgG [Pseudomonas mendocina ymp]
 gi|145573453|gb|ABP82985.1| flagellar basal-body rod protein FlgG [Pseudomonas mendocina ymp]
          Length = 261

 Score =  158 bits (398), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 50/260 (19%), Positives = 98/260 (37%), Gaps = 21/260 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M ++  +      A ++ +S VA+N++N +T GF++ +V F ++  AI+           
Sbjct: 1   MSSALWVSKTGLAAQDKAMSAVANNLANVNTTGFKSDRVVFEDLFYAIELQPGAQADQVN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  S V           GS  +TG  +D A+ G+ +F +E+P   I  T  G+F
Sbjct: 61  TVPSGIQLGSGVRVAGTQKVFTEGSIQTTGQPMDLAIIGNGFFQVEAPNGDIYYTESGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           ++  +G +V+A G   V  +                V            +  + L +   
Sbjct: 121 QLNAEGVIVNAQGLPLVPGIEVPAGSSRFTVGSDGIVTAVMAGETLPVELGQITLANFAN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +     +      + +        +K+G LE SN   +  M  MI + + +
Sbjct: 181 PGGLEALGGNLYRETVASGEPVEGTPGEDGLGNLKQGVLEGSNVQVVEAMVNMIAIQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRN 240
            +   ++D     M + +  
Sbjct: 241 EANAKVLDAASG-MQQFLNQ 259


>gi|145298493|ref|YP_001141334.1| flagellar basal body rod protein FlgG [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142851265|gb|ABO89586.1| flagellar basal body rod protein FlgG [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 262

 Score =  158 bits (398), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 44/261 (16%), Positives = 94/261 (36%), Gaps = 21/261 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +  I      A +  +S  ++N++N  TVG++  +  F +++    N    +     
Sbjct: 1   MNPALWISKTGLDAQQTNISVTSNNLANASTVGYKKSRAIFEDLLYQNINQPGGRSSADT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                    +         +   G+  +T   LD  + G  +F ++ P G    TR+G+F
Sbjct: 61  ELPSGLMLGAGAKVVATQKNHGQGNVQTTDNSLDLMISGRGYFEIQLPDGSAAYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG--KVIATMGLYSVD 164
            + D+G++V+    YP+     +P          +     ++   G  +V+  + L    
Sbjct: 121 TLNDEGTIVTPGNGYPLQPEIQIPENAQSVTVSTDGQVSIQLKGDGASQVVGQINLSDFV 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
            + G      +                       +K+G LE SN N   E+  +I   + 
Sbjct: 181 NASGLQPMGENMFLETQSSGAPIGGVAGADGLGVIKQGMLETSNVNVTEELVNLIQAQRV 240

Query: 220 FNSITTLIDENEKSMLEAIRN 240
           +   + ++   +  M   I+ 
Sbjct: 241 YEMNSKVLSAVDGMMSFLIQR 261


>gi|170747255|ref|YP_001753515.1| flagellar basal body rod protein FlgF [Methylobacterium
           radiotolerans JCM 2831]
 gi|170653777|gb|ACB22832.1| flagellar basal body rod protein [Methylobacterium radiotolerans
           JCM 2831]
          Length = 246

 Score =  158 bits (398), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 60/247 (24%), Positives = 117/247 (47%), Gaps = 9/247 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN-----DIDQK 55
           MQ +  +G+++Q+AL++ L  +A+NM+N  T GF+    +F E +  + +       D++
Sbjct: 1   MQNALFVGVSSQMALQRELDVIANNMANVSTTGFKARNTRFEEYLMPVASADSFARPDRR 60

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115
           +S+V      L    G    TG  L+ A++G A+ A++SP+G   TR+G F++   G+LV
Sbjct: 61  LSYVIDQGTTLDLGQGPIEQTGNPLNVAVKGSAFIAVQSPQGERYTRNGAFELDAQGTLV 120

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
           ++ G   V      PI I  ++    +G  G +S    +   + L +    Q       +
Sbjct: 121 TSDGYKVVG--EGGPISINPQETGLAIGPDGTVSTNLGIRGRIKLVTFANPQRLTNEGAN 178

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
             +   P           ++   LE SN   + EM +++ + + +  ++++I   +    
Sbjct: 179 LYASPEP--ARAAGIDGRLEPESLERSNVRPVIEMTRLMDVNRSYAMVSSMISRLDDLRG 236

Query: 236 EAIRNIA 242
            AIR +A
Sbjct: 237 TAIRRLA 243


>gi|126463746|ref|YP_001044860.1| flagellar basal body rod protein FlgG [Rhodobacter sphaeroides ATCC
           17029]
 gi|126105410|gb|ABN78088.1| flagellar basal-body rod protein FlgG [Rhodobacter sphaeroides ATCC
           17029]
          Length = 261

 Score =  158 bits (398), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 91/254 (35%), Gaps = 21/254 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             +  I      A + R+  +++N++N  T G+   +  F+++                 
Sbjct: 1   MKALQIAATGMSAQQTRVDVISNNLANMSTTGYNARRADFADLHYQQVVRPGTVSAEDGR 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q    V      +    G+   T  +LD A++G  +  +  P G    TRDG  
Sbjct: 61  MLPTGVQLGMGVRPSAVSVVLSQGALAQTRGDLDLAIDGRGYLEVTLPSGQSAYTRDGAL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           K + +G +VS+ G      +           +    V        + +++  + L     
Sbjct: 121 KRSAEGLIVSSDGHEVAPGITIPQDAASISIDATGEVWGYFTGQVQPQLLGQISLTGFTN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
            +G     ++         P            T+++G+LE+S+ +S+ E+ ++I   + +
Sbjct: 181 EKGLEAIGSNLFLETAASGPPIGGVAGEDGFGTLRQGYLEESSVDSVQEITELIKAQRGY 240

Query: 221 NSITTLIDENEKSM 234
                +I   ++ +
Sbjct: 241 ELNAKVITAADQML 254


>gi|27363703|ref|NP_759231.1| flagellar basal body rod protein FlgG [Vibrio vulnificus CMCP6]
 gi|37679149|ref|NP_933758.1| flagellar basal body rod protein FlgG [Vibrio vulnificus YJ016]
 gi|320157107|ref|YP_004189486.1| flagellar basal-body rod protein FlgG [Vibrio vulnificus MO6-24/O]
 gi|27359819|gb|AAO08758.1| flagellar basal-body rod protein FlgG [Vibrio vulnificus CMCP6]
 gi|37197891|dbj|BAC93729.1| flagellar basal body rod protein FlgG [Vibrio vulnificus YJ016]
 gi|319932419|gb|ADV87283.1| flagellar basal-body rod protein FlgG [Vibrio vulnificus MO6-24/O]
          Length = 262

 Score =  158 bits (398), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 45/262 (17%), Positives = 95/262 (36%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +  +      A +  ++T+++N++N  T+GF+  +  F ++     N    +     
Sbjct: 1   MHPALWVSKTGLDAQQTNIATISNNLANASTIGFKKGRAVFEDLFYQNINQPGGQSSQNT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    +             G+  +T   LD  +EGD +F +  P   I  +R+G+F
Sbjct: 61  QLPSGLMLGAGSKVVATQKVHTHGNAQTTTNALDLMVEGDGFFQITMPDGNIGYSRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD--EIFNVGEKGEISQKGKVIATMGLYSVD 164
            +  +G +V++   YP+     +P             V  +    Q  +V+  + +    
Sbjct: 121 TLNGEGVVVTSGSGYPLEPEIVIPEDAISITVGTDGEVSVRIRGQQNNQVVGQITITDFV 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +   P       ++          V++  LE SN N   E+  MI   + 
Sbjct: 181 NPGGLEPIGQNLYLPTGASGDPQEGVPGLDGLGEVRQSMLETSNVNVTEELVNMIEAQRV 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   +K M    + +
Sbjct: 241 YEMNSKVISSVDKMMSFVNQQL 262


>gi|90418400|ref|ZP_01226312.1| flagellar basal-body rod protein FlgF [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90338072|gb|EAS51723.1| flagellar basal-body rod protein FlgF [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 241

 Score =  158 bits (398), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 79/243 (32%), Positives = 137/243 (56%), Gaps = 4/243 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M+T+  + L+AQLA+ +RL T+A N++N+ T GFR  ++KF E++        + +SF +
Sbjct: 1   METALPVALSAQLAMSKRLDTIAHNVANSRTTGFRAEEIKFEELISL---SAPEPVSFAS 57

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
            G  Y S   G    TG  LD A++GDA+FA + P G + TRDGR ++   G + + SG 
Sbjct: 58  EGTTYFSTRSGEMTQTGNPLDMAVDGDAFFAFQGPNGPVYTRDGRMRINAQGMVETISGY 117

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
            P++D+   P+Q+        +   G I+Q G     +GL+ +       R ENSG+ P+
Sbjct: 118 -PLVDVGGAPLQVDPNAGPVTITRDGMITQNGAQAGAVGLFQLPAGAKLTRFENSGLIPD 176

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
               P+ + + V V +GF E SN N M E+ ++I L + F + + L+  +E+++ +A++ 
Sbjct: 177 RAAVPIVEFADVGVIQGFQEGSNVNPMLEISRLISLQRAFENASNLVQSSERTLDDAVKT 236

Query: 241 IAS 243
           + +
Sbjct: 237 LGT 239


>gi|77464904|ref|YP_354408.1| flagellar basal body rod protein FlgG [Rhodobacter sphaeroides
           2.4.1]
 gi|77389322|gb|ABA80507.1| putative flagellar basal body rod protein [Rhodobacter sphaeroides
           2.4.1]
          Length = 261

 Score =  158 bits (398), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 91/254 (35%), Gaps = 21/254 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             +  I      A + R+  +++N++N  T G+   +  F+++                 
Sbjct: 1   MKALQIAATGMSAQQTRVDVISNNLANMSTTGYNARRADFADLHYQQAVRPGTVSAEDGR 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q    V      +    G+   T  +LD A++G  +  +  P G    TRDG  
Sbjct: 61  MLPTGVQLGMGVRPSAVSVVLSQGALAQTRGDLDLAIDGRGYLEVTLPSGQSAYTRDGAL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           K + +G +VS+ G      +           +    V        + +++  + L     
Sbjct: 121 KRSAEGLIVSSDGHEVAPGITIPQDAASISIDATGEVWGYFTGQVQPQLLGQISLTGFTN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
            +G     ++         P            T+++G+LE+S+ +S+ E+ ++I   + +
Sbjct: 181 EKGLEAIGSNLFLETAASGPPIAGVAGEDGFGTLRQGYLEESSVDSVQEITELIKAQRGY 240

Query: 221 NSITTLIDENEKSM 234
                +I   ++ +
Sbjct: 241 ELNAKVITAADQML 254


>gi|56419762|ref|YP_147080.1| flagellar basal body rod protein FlgG [Geobacillus kaustophilus
           HTA426]
 gi|56379604|dbj|BAD75512.1| flagellar hook protein [Geobacillus kaustophilus HTA426]
          Length = 263

 Score =  158 bits (398), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 54/261 (20%), Positives = 101/261 (38%), Gaps = 27/261 (10%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID----------- 53
              G+ A    + +L  + +N++N +T GF+  +  F +++    +              
Sbjct: 1   MYSGIGAMRNFQTKLDVIGNNIANVNTYGFKKGRTIFKDLMSQTISGASGPNAGAGRGGT 60

Query: 54  ---QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFKV 108
              Q                GS  +TG  LD A+ GD +F     S    + TR G F +
Sbjct: 61  NPKQVGLGSQLAAIDTVHTQGSLQTTGRVLDLAISGDGFFVVGDASGNNRMYTRAGNFYL 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG-----KVIATMGLYSV 163
              G +V+A G+Y  L + +  +QIP   +  ++G  G+++          I T+ L   
Sbjct: 121 DSQGYIVNADGQYL-LGVGNSRLQIPTDAKSLSIGADGKVTIVDASGTLSTIGTIQLAKF 179

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQ 218
             + G  +  N+              +       T+  G LE SN +   E  +MI   +
Sbjct: 180 ANNDGLEKAGNNLFRETTNSGTPTTGAPGANGTGTIVSGALEMSNVDLAEEFTEMIVAQR 239

Query: 219 KFNSITTLIDENEKSMLEAIR 239
            F + T +I  +++ + E + 
Sbjct: 240 GFQANTRIITTSDEILQELVN 260


>gi|224825779|ref|ZP_03698883.1| flagellar basal-body rod protein FlgG [Lutiella nitroferrum 2002]
 gi|224602003|gb|EEG08182.1| flagellar basal-body rod protein FlgG [Lutiella nitroferrum 2002]
          Length = 262

 Score =  158 bits (398), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 52/262 (19%), Positives = 94/262 (35%), Gaps = 20/262 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  I      A + RL  +A+N++N +TVGF+  ++ F ++   ++           
Sbjct: 1   MNPALWISKTGIQAQDARLGAIANNLANVNTVGFKRDRMVFEDLFYQVERQPGARVDANN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                 Q  +             GS  +TG  LD A+ G  +  ++   G    TR G+ 
Sbjct: 61  ASPSGVQLGNGTRLLGTQKVFTSGSITTTGQALDVAIVGQGFLQVQMSNGETGYTRAGQL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V  DG LV+A G   V  +            E   V      S     I  + L +   
Sbjct: 121 QVNSDGQLVNAQGLPIVPAITVPATATSVSIGETGTVSITQSGSTAQTEIGQLTLANFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G +   ++              +  +     +K+G LE SN   + EM  MI   + +
Sbjct: 181 PTGLLALGDNLFQETTASGTPTVGNPGSDALGKLKQGALEGSNVQVVEEMVDMIAAQRTY 240

Query: 221 NSITTLIDENEKSMLEAIRNIA 242
              T ++   +  M    +++ 
Sbjct: 241 EMNTKVLSAADNMMQYLAQSVR 262


>gi|221640825|ref|YP_002527087.1| flagellar basal body rod protein FlgG [Rhodobacter sphaeroides
           KD131]
 gi|332559802|ref|ZP_08414124.1| FlgG2 [Rhodobacter sphaeroides WS8N]
 gi|221161606|gb|ACM02586.1| Flagellar basal-body rod protein FlgG precursor [Rhodobacter
           sphaeroides KD131]
 gi|332277514|gb|EGJ22829.1| FlgG2 [Rhodobacter sphaeroides WS8N]
          Length = 261

 Score =  158 bits (398), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 91/254 (35%), Gaps = 21/254 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             +  I      A + R+  +++N++N  T G+   +  F+++                 
Sbjct: 1   MKALQIAATGMSAQQTRVDVISNNLANMSTTGYNARRADFADLHYQQVVRPGTVSAEDGR 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q    V      +    G+   T  +LD A++G  +  +  P G    TRDG  
Sbjct: 61  MLPTGVQLGMGVRPSAVSVVLSQGALAQTRGDLDLAIDGRGYLEVTLPSGQSAYTRDGAL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           K + +G +VS+ G      +           +    V        + +++  + L     
Sbjct: 121 KRSAEGLIVSSDGHEVAPGITIPQDAASISIDATGEVWGYFTGQVQPQLLGQISLTGFTN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
            +G     ++         P            T+++G+LE+S+ +S+ E+ ++I   + +
Sbjct: 181 EKGLEAIGSNLFLETAASGPPIAGVAGEDGFGTLRQGYLEESSVDSVQEITELIKAQRGY 240

Query: 221 NSITTLIDENEKSM 234
                +I   ++ +
Sbjct: 241 ELNAKVITAADQML 254


>gi|283850806|ref|ZP_06368092.1| flagellar basal-body rod protein FlgF [Desulfovibrio sp. FW1012B]
 gi|283573729|gb|EFC21703.1| flagellar basal-body rod protein FlgF [Desulfovibrio sp. FW1012B]
          Length = 260

 Score =  158 bits (398), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 53/258 (20%), Positives = 99/258 (38%), Gaps = 22/258 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF-- 58
           M+ S    L   L+ E RL+  A+N++N +T G++  +V F +      +D         
Sbjct: 1   MEMSMYSALFGALSTETRLNLSANNLANINTTGYKRDRVAFEDTFKRYAHDYHVDPRGDL 60

Query: 59  --------------VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDG 104
                              + +    G+   TG  LD A++G  +F + +  G   TR+G
Sbjct: 61  REKEIFPRADLIAKPRLAMQTIDFSQGALQLTGNPLDLAIQGPGFFKVSNAGGTYYTRNG 120

Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
            F  +  G LV+      + +   + I        F+V   G +   G  +A + + +V 
Sbjct: 121 AFHRSSQGMLVTDQDYPVLGNGGPIQI---PDGRSFSVDATGAVYVDGGQVAQIDVVNVQ 177

Query: 165 MSQGFVRRENSGISPNIPPTPLE---DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221
                 +   +  +     T  E   +     V +G+LE  N   + EM  MI   + F 
Sbjct: 178 NPDALRKYGANLYTAADGATVQEGPAEGGTTQVAQGYLEKPNVEVVEEMVTMIETQRTFE 237

Query: 222 SITTLIDENEKSMLEAIR 239
           +   ++  + +   +AIR
Sbjct: 238 AYQKVMTNSNELDTKAIR 255


>gi|254720629|ref|ZP_05182440.1| flagellar basal body rod protein FlgF [Brucella sp. 83/13]
 gi|265985673|ref|ZP_06098408.1| flagellar basal body rod protein FlgF [Brucella sp. 83/13]
 gi|306837353|ref|ZP_07470232.1| flagellar basal body rod protein FlgF [Brucella sp. NF 2653]
 gi|264664265|gb|EEZ34526.1| flagellar basal body rod protein FlgF [Brucella sp. 83/13]
 gi|306407545|gb|EFM63745.1| flagellar basal body rod protein FlgF [Brucella sp. NF 2653]
          Length = 243

 Score =  158 bits (398), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 80/242 (33%), Positives = 130/242 (53%), Gaps = 4/242 (1%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
             S  +GL++ + LE+R+  +A N++N  TVGFR    KF  +V    +D    +SF  +
Sbjct: 3   NNSIYVGLSSLITLERRMDAIAHNVANVSTVGFRGEGTKFDTIVSDKASD---DVSFATA 59

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
           GK Y+  E G  I T   LD A++GDAW +  +P+G + +RDGR K+   G LVS +G  
Sbjct: 60  GKSYIRTEAGPLIKTDNPLDVAVKGDAWMSFSTPQGQVYSRDGRMKMLSTGDLVSVTGNA 119

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
             LD+   PI +        +   G I Q G  +  +GLY++           SG+ P+ 
Sbjct: 120 I-LDVGGEPIVLNPGGGAPRISSDGAIYQNGVQVGAIGLYTIPADADLAYAGTSGVIPSK 178

Query: 182 PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           P  P+ D + V V +G +E SN ++M EM ++I +++ F  +  L+ + E ++ EAI+ +
Sbjct: 179 PAQPVVDDNSVGVVQGMIEGSNVDAMTEMTRLISISRAFEQVNNLLSQQEATVSEAIKTL 238

Query: 242 AS 243
            S
Sbjct: 239 GS 240


>gi|319898637|ref|YP_004158730.1| flagellar basal-body rod protein flgG (Distal rod protein)
           [Bartonella clarridgeiae 73]
 gi|319402601|emb|CBI76146.1| Flagellar basal-body rod protein flgG (Distal rod protein)
           [Bartonella clarridgeiae 73]
          Length = 264

 Score =  158 bits (398), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 42/262 (16%), Positives = 92/262 (35%), Gaps = 21/262 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             S +I      A +  L  +A+NM+N +T GF+  + +F++++      +         
Sbjct: 3   MKSLSIAATGMAAQQTNLDVIANNMANINTTGFKRGRAEFADLMYVADRAVGIPNMLNQA 62

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                      V +         G+F+ TG  LD A+ G+ WF ++ P   +  TR G F
Sbjct: 63  IIPEGAMIGMGVRTAAVRTVNTQGAFVQTGNALDLAINGNGWFEIQDPNGNVFYTRSGAF 122

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-IATMGLYSVDM 165
            +++ G +++  G      +                      +    V    + L +   
Sbjct: 123 NLSETGQIITLDGNLVQPVITIPIGSKNVTVSPDGTVYYQTDADPSAVEAGRLRLVNFVN 182

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++                      ++ +  LE SN + + EM ++I   + +
Sbjct: 183 EVGLEPIGDNLFRETQASGAPVPGDPKDDGYGSIMQAMLESSNVDPVKEMTELIAAQRSY 242

Query: 221 NSITTLIDENEKSMLEAIRNIA 242
              + +I  +++      +N+ 
Sbjct: 243 EMNSKVIQASDEMAAVISKNLR 264


>gi|302338303|ref|YP_003803509.1| flagellar basal-body rod protein FlgF [Spirochaeta smaragdinae DSM
           11293]
 gi|301635488|gb|ADK80915.1| flagellar basal-body rod protein FlgF [Spirochaeta smaragdinae DSM
           11293]
          Length = 282

 Score =  158 bits (398), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 52/278 (18%), Positives = 103/278 (37%), Gaps = 38/278 (13%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKND------ 51
           M      G +  +    R+  +++N++N D VG++  +     F +++    ND      
Sbjct: 1   MVRGIYTGASGMVDQMHRMDAISNNLANVDLVGYKRDQSVSKAFPQMLIRRMNDDGVYSF 60

Query: 52  ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101
                     +    + V   + +     G+   TG + D AL+G  +FA+++PRG   T
Sbjct: 61  PFGSADTAPVVGMIGTGVEYNESFTVFSQGALKETGNDFDLALDGKGFFAVDTPRGERYT 120

Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV------- 154
           R+G F +T +G L +  G+  + +   + I+                S  G         
Sbjct: 121 RNGTFVLTKEGILTTKEGEPVLGENGIIRIKKNNFVVDERGQVWQNGSYDGDPQRLVSKE 180

Query: 155 ---------IATMGLYSVDMSQGFVRRENSGISPNIPPTPLED---LSGVTVKRGFLEDS 202
                    + T+ +      +   +  +S                 S   V +GFLE S
Sbjct: 181 ENEWENLELVDTLKVVDFRRDRYLKKEGDSLYIAPEEAGASNQVALGSETKVVQGFLEGS 240

Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
           N NS+ EM +MI + + + +    +  ++      I +
Sbjct: 241 NVNSVTEMVRMIEVNRAYEANQKAMQTHDALTGRLIND 278


>gi|298529927|ref|ZP_07017329.1| fagellar hook-basal body protein [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298509301|gb|EFI33205.1| fagellar hook-basal body protein [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 261

 Score =  158 bits (398), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 52/261 (19%), Positives = 110/261 (42%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           MQ          ++ E +++T+ +N++N +T G++  K+ F +V     +D       + 
Sbjct: 1   MQDEMYSAFFGAMSQEAKMNTITNNLANVNTTGYKRDKIAFEDVFTRYASDYGDPNMTLE 60

Query: 61  SGKEYLSK---------------EVGSFISTGTELDFALEGDAWFALESPR-GIILTRDG 104
               +                  + G    TG  LD A+ G+ +F + +P      TR+G
Sbjct: 61  DRLPWPESKLRSQTRPSPVHLDLQDGDMRKTGNPLDLAISGEGFFEVTTPEGETAYTRNG 120

Query: 105 RFKVTDD-GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
            F    + G LV+  G+   L     PI+IP+      +GE GE+   G ++  + L + 
Sbjct: 121 SFLRNPETGHLVT--GQNFELQGEGGPIEIPEDASNIAIGENGEVLADGDLLDVINLTTF 178

Query: 164 DMSQGFVRRENSGISP-NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222
                  ++    +   +   +         +++G+LE+SN + +YEM  MI   + F +
Sbjct: 179 TDLNALEKKGRQLVQVKDGADSAPIPAEDARIEQGYLENSNVDPVYEMVNMISTMRNFEA 238

Query: 223 ITTLIDENEKSMLEAIRNIAS 243
           +  ++  + +   + I+ + +
Sbjct: 239 LQKMMTSSHEKDQQLIQQVGT 259


>gi|260437440|ref|ZP_05791256.1| flagellar basal-body rod protein FlgG [Butyrivibrio crossotus DSM
           2876]
 gi|292810072|gb|EFF69277.1| flagellar basal-body rod protein FlgG [Butyrivibrio crossotus DSM
           2876]
          Length = 256

 Score =  157 bits (397), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 53/256 (20%), Positives = 99/256 (38%), Gaps = 21/256 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKND------ 51
           M  +   G    +   +RL  V++N++N+ T  ++        F +++    ND      
Sbjct: 1   MVRALYTGATGMVNEMKRLDVVSNNLANSATTAYKKEGATSQAFKDMLAIKINDETDSYI 60

Query: 52  ---IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-----IILTRD 103
              I      V  G+ Y     G+   TG   D AL G+ +FA+          +  TRD
Sbjct: 61  DRPIGYMSLGVKIGETYTDYSTGNLRETGNTYDLALSGNGFFAISYADKNGTESVRYTRD 120

Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
           G F V  +G L++  G + + D   +           ++ E G I   G+ +A + +   
Sbjct: 121 GSFTVNSEGILMTKDGDFVLGDDGGLITI--PVGTEVSINESGIIEADGEEVARLQITDF 178

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223
           +      +   +              +   V +G+LE SN N + EM  MI + + + S 
Sbjct: 179 EDYDYLKKFGENMY--TAIDGATTKAAQGKVYQGYLESSNVNVVSEMVNMITIARDYESS 236

Query: 224 TTLIDENEKSMLEAIR 239
             +I   + ++  A+ 
Sbjct: 237 QKVIQSIDSTLERAVN 252


>gi|218135323|ref|ZP_03464127.1| hypothetical protein BACPEC_03228 [Bacteroides pectinophilus ATCC
           43243]
 gi|217990708|gb|EEC56719.1| hypothetical protein BACPEC_03228 [Bacteroides pectinophilus ATCC
           43243]
          Length = 256

 Score =  157 bits (397), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 59/256 (23%), Positives = 103/256 (40%), Gaps = 21/256 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVV---------GAI 48
           M           +  + RL  V++N++N  T  ++   +    F EV+         G +
Sbjct: 1   MVKGLYTAYTGLVNQQNRLDVVSNNLANAATTAYKKEGLTSQSFDEVMAYKVKDASVGTV 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-----PRGIILTRD 103
              I      V  G+ Y     GSF  TG   D AL GD +F++           + TRD
Sbjct: 61  NQYIGDLNLGVKIGESYRDYSQGSFRETGENFDLALSGDGFFSISFTNKAGETSTMYTRD 120

Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
           G F +T DG LV+  G + +      PIQ+P       +   G I+  G  I  + +   
Sbjct: 121 GNFSMTKDGYLVTKDGDFVLG--EGGPIQLPTDAAKIAIDRDGTITADGVQIDKLAITDF 178

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223
           +      +   +        T     +   V +G+LE SN N + EM +MI +++ F + 
Sbjct: 179 EDYNYLEQYGENLYR--ALDTATTKDAAGQVYQGYLEQSNVNVVSEMVEMITISRAFEAN 236

Query: 224 TTLIDENEKSMLEAIR 239
              ++  + ++ +A+ 
Sbjct: 237 QKAMNAADDTLKKAVT 252


>gi|83858805|ref|ZP_00952327.1| flagellar basal-body rod protein FlgF [Oceanicaulis alexandrii
           HTCC2633]
 gi|83853628|gb|EAP91480.1| flagellar basal-body rod protein FlgF [Oceanicaulis alexandrii
           HTCC2633]
          Length = 244

 Score =  157 bits (397), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 68/244 (27%), Positives = 113/244 (46%), Gaps = 4/244 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS--EVVGAIKNDIDQKISF 58
           M  +  IGL  QL L +++  VA+N++N +T GF+  ++       + A   D   +  F
Sbjct: 1   MDNTMLIGLTRQLTLRRQMDVVANNIANANTQGFKAERMMLEPDTSMRARHQDGPNRARF 60

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSAS 118
           V           G+   T   LD AL+GD +F LE+  G   TRDG F ++  G LV+  
Sbjct: 61  VDEWAMGRDFSQGALTHTSRPLDLALQGDGFFMLETDAGERFTRDGAFTLSPQGELVAGD 120

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178
           G    LD    PI +       ++GE G ++Q G+ IA +G+      QG + +      
Sbjct: 121 GARV-LDAGGAPIILDPAAGQISIGETGIVTQNGQQIAQVGVVRFAD-QGVLNKTGDNRY 178

Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
                          VK+GFLE SN   M E+  M+ +++ + S++ +I + ++   +AI
Sbjct: 179 VAPEDAERVIEDLPQVKQGFLESSNVRPMLEITSMMEVSRAYASVSRMIKDTDELSRKAI 238

Query: 239 RNIA 242
             + 
Sbjct: 239 DRLG 242


>gi|328543156|ref|YP_004303265.1| flagellar basal-body rod FlgG [polymorphum gilvum SL003B-26A1]
 gi|326412902|gb|ADZ69965.1| Flagellar basal-body rod FlgG [Polymorphum gilvum SL003B-26A1]
          Length = 259

 Score =  157 bits (397), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 39/258 (15%), Positives = 90/258 (34%), Gaps = 21/258 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             + +I      A E  +  +++N++N  T G++  +  F +++      +         
Sbjct: 1   MKALHIAATGMKAQELNVEVISNNVANMRTTGYKRQRADFQDLLYQNLRRMGTDSSNAGT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  S V +         G+   TG ++D A+ G+ +F ++ P      TRDG F
Sbjct: 61  IVPTGVQIGSGVKTAATARIMTQGTIEQTGKDMDVAIRGEGFFQIQLPDGTTAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           +   +G+LV+  G         +P          N   +  +    +    + L      
Sbjct: 121 ERDANGTLVTIDGYTLD-PGIVIPNDARDLTISANGTVQAVVGVATQQFGQIQLARFVNK 179

Query: 167 QGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221
            G     ++           +           +++ +LE SN +++ E+  +I   + + 
Sbjct: 180 SGLEAIGDNLYLETEASGQPQVGIPGEEGYGDLQQSYLEMSNVDAVSEISDLIAAQRAYE 239

Query: 222 SITTLIDENEKSMLEAIR 239
             + +I   ++       
Sbjct: 240 MNSRIIQAADEMYSTTTN 257


>gi|323204838|gb|EFZ89832.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
          Length = 255

 Score =  157 bits (397), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 41/259 (15%), Positives = 85/259 (32%), Gaps = 25/259 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M            A +  +  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MDR-----KTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 55

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           G+   T    D A++G  +F +  P G    TRDG F
Sbjct: 56  TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGTSAYTRDGSF 115

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V  +G LV+A G      +      +         V    +       +  + L +   
Sbjct: 116 QVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMN 175

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +            + +        + +G++E SN N   E+  MI + + +
Sbjct: 176 DTGLESIGENLYIETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY 235

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +   ++ + +  +
Sbjct: 236 EINSKAVSTTDQMLQKLTQ 254


>gi|56460250|ref|YP_155531.1| flagellar basal body rod protein FlgG [Idiomarina loihiensis L2TR]
 gi|56179260|gb|AAV81982.1| Flagella basal body rod protein [Idiomarina loihiensis L2TR]
          Length = 262

 Score =  157 bits (397), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 40/262 (15%), Positives = 91/262 (34%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +  I      A ++ +S +++N++N+ T+GF+  +  F +++    N    +     
Sbjct: 1   MNPALWISKTGLDAQQRDISVISNNLANSSTIGFKKSRAVFEDLLYQNINQPGGQSAQDT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    +         S   G+  +T   LD  ++G  +F +  P   I  TR+G+F
Sbjct: 61  ELPNGLMLGAGTKVVATQKSHTQGNVQTTDNSLDVMIDGKGFFQVLMPDGNISYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEIS--QKGKVIATMGLYSVD 164
            + ++G +V++   Y +     +P                         V+  + L +  
Sbjct: 121 SLNEEGEIVTSGNGYTIEPAIQIPEDAMSVSISQEGEVTVTQPGNPDNVVVGQINLVNFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +            +            +G LE SN N   E+  +I   + 
Sbjct: 181 NPAGLQPMGQNLYKETAVSGAPLEAVPGVDGMGNTIQGALETSNVNVTEELVNLIESQRG 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   ++ +    + +
Sbjct: 241 YEMNSKVISSVDQMLSYINQQL 262


>gi|294013088|ref|YP_003546548.1| flagellar basal-body rod protein FlgG [Sphingobium japonicum UT26S]
 gi|292676418|dbj|BAI97936.1| flagellar basal-body rod protein FlgG [Sphingobium japonicum UT26S]
          Length = 262

 Score =  157 bits (397), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 45/258 (17%), Positives = 90/258 (34%), Gaps = 20/258 (7%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK-------- 55
           + ++      A   ++  +A+N++N +T GF+  +  F  +                   
Sbjct: 5   ALHVARTGLDAQNTKMRVIANNLANVNTTGFKRDRADFETLAYQQIVAAGANSDSENKFA 64

Query: 56  -----ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVT 109
                 S VA          G+   TG  LD A+EG  +F ++ P   I  TR G F  T
Sbjct: 65  TGLNLGSGVALQGTSKINAQGTLNQTGNTLDMAIEGSGYFQVQQPDGSIAYTRAGNFTTT 124

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDMSQG 168
            +G +V++ G   +  +                     +   +   +  + L S     G
Sbjct: 125 AEGVVVTSDGLPLIPQITVPEGATSVTIGNDGTVSATLQGQTEPTQLGQIELASFMNPGG 184

Query: 169 FVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223
                 + +  +      +           V+ G+LE SN N + E+  MI   + +   
Sbjct: 185 LTSVGGNLLKESAASGTPQVGVAGLDGRGVVRAGYLETSNVNVVEELVDMIETQRAYEVN 244

Query: 224 TTLIDENEKSMLEAIRNI 241
           + +I   ++ +  A + +
Sbjct: 245 SKMIKATDEMLQYANQQL 262


>gi|316932824|ref|YP_004107806.1| flagellar basal-body rod protein FlgF [Rhodopseudomonas palustris
           DX-1]
 gi|315600538|gb|ADU43073.1| flagellar basal-body rod protein FlgF [Rhodopseudomonas palustris
           DX-1]
          Length = 253

 Score =  157 bits (397), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 62/251 (24%), Positives = 123/251 (49%), Gaps = 11/251 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND-----IDQK 55
           M+ +  +GL+ Q+ LE+++  VA+N++N  T GF+  +  F E +    ++      D++
Sbjct: 1   MENALLVGLSRQVVLERQMDVVANNLANISTNGFKAERSMFQEFLNTGAHEDNFPRPDRR 60

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115
           +SFV     Y     GS   T   LD A++G  +  +++P+G   TRDG  K+   G LV
Sbjct: 61  VSFVQDRATYHDLSTGSLQQTKNPLDIAIDGPGFLVVQTPQGERFTRDGSLKINAQGQLV 120

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI----ATMGLYSVDMSQGFVR 171
           ++SG   +     + IQ   K+   +   +  + +   +I      + + S D  Q  ++
Sbjct: 121 NSSGFPVLGTGGPIVIQPTDKELSISPDGRVSVLEGTSIIDSLRGKLRVVSFDRPQTLMK 180

Query: 172 RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
           +  +  +P       +  S   +++G++E SN NS+ EM +MI +T+ +  I+ ++ +  
Sbjct: 181 QGGNLFAPTSDQGTPDIKSM--LRQGYVEKSNVNSVLEMTRMIDVTRTYTQISAMLQQQS 238

Query: 232 KSMLEAIRNIA 242
           +    AI  + 
Sbjct: 239 ELRKAAIEKLG 249


>gi|256014918|ref|YP_003104927.1| flagellar basal-body rod protein FlgF [Brucella microti CCM 4915]
 gi|255997578|gb|ACU49265.1| flagellar basal-body rod protein FlgF [Brucella microti CCM 4915]
          Length = 243

 Score =  157 bits (397), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 80/242 (33%), Positives = 130/242 (53%), Gaps = 4/242 (1%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
             S  +GL++ + LE+R+  +A N++N  TVGFR    KF  +V    +D    +SF  +
Sbjct: 3   NNSIYVGLSSLITLERRMDAIAHNVANVSTVGFRGEGTKFDTIVSDKASD---DVSFATA 59

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
           GK Y+  E G  I T   LD A++GDAW +  +P+G + +RDGR K+   G LVS +G  
Sbjct: 60  GKSYIRTEAGPLIKTDNPLDVAVKGDAWMSFSTPQGQVYSRDGRMKMLSTGDLVSVTGNA 119

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
             LD+   PI +        +   G I Q G  +  +GLY++           SG+ P+ 
Sbjct: 120 I-LDVGGAPIVLNPGGGAPRISSDGAIYQNGVQVGAIGLYTIPADADLAYAGTSGVIPSK 178

Query: 182 PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           P  P+ D + V V +G +E SN ++M EM ++I +++ F  +  L+ + E ++ EAI+ +
Sbjct: 179 PAQPVVDDNSVGVVQGMIEGSNVDAMTEMTRLISISRAFEQVNNLLSQQEATVSEAIKTL 238

Query: 242 AS 243
            S
Sbjct: 239 GS 240


>gi|56421867|ref|YP_149185.1| flagellar basal-body rod protein [Geobacillus kaustophilus HTA426]
 gi|56381709|dbj|BAD77617.1| flagellar basal-body rod protein [Geobacillus kaustophilus HTA426]
          Length = 276

 Score =  157 bits (397), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 58/276 (21%), Positives = 106/276 (38%), Gaps = 37/276 (13%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51
           M        +  LA E+R+  + +N++N +T G++        F E++ +   D      
Sbjct: 1   MLRGLYTAASGMLAQERRVDWLTNNLANAETPGYKADAAAMRAFPELLMSRLEDQPIPTA 60

Query: 52  ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFAL-------------EGDA 88
                     I   ++ V   +   +   G    TG   D AL              G  
Sbjct: 61  SRRAIPTQTVIGPLVTGVYMQELIPNFRQGDVKETGLATDIALVDGQVPVDRASGQRGAL 120

Query: 89  WFALESPRGI-ILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGE 147
           +FA+ + +G    TR+G F ++ DG L +  G Y +    +   +IP   E F V + G 
Sbjct: 121 FFAVANGQGEVRYTRNGHFTLSPDGYLTTQEGWYVL---DANGERIPLSSERFAVRDDGT 177

Query: 148 ISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-TVKRGFLEDSNANS 206
           I  +      +G+      Q  V+  N        P P    +   TVK+ FLE SN + 
Sbjct: 178 IIDENGTATRLGVAFAANPQTLVKEGNGLFRSTTGPLPQAPGNVTYTVKQRFLERSNVDI 237

Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
              M  ++   + F +   ++   ++S+ +A+  + 
Sbjct: 238 ERTMTDLLAAYRAFEANQKIVQAYDRSLDKAVNEVG 273


>gi|84502379|ref|ZP_01000515.1| flagellar basal body rod protein FlgG [Oceanicola batsensis
           HTCC2597]
 gi|84389191|gb|EAQ01988.1| flagellar basal body rod protein FlgG [Oceanicola batsensis
           HTCC2597]
          Length = 261

 Score =  157 bits (397), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 42/262 (16%), Positives = 90/262 (34%), Gaps = 22/262 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55
             +  I     +A +  +  +++N++N  T GF++ +  F +++                
Sbjct: 1   MKALGIAATGMMAQQTNVDVISNNIANASTTGFKSARASFQDLLYENIEREGAPTSDQGT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                      V +         G    T  + D A+EG  +F +  P G    TRDG  
Sbjct: 61  YLPVGIDVGLGVRTAGTVRLNTQGGLTQTENQTDLAIEGRGYFVVNMPDGNAAYTRDGSL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           ++  +G +V+  G      +         +  E   V            I  + L +   
Sbjct: 121 RLNAEGQIVTQQGYEVNPGIVVPQDTTRVEIGETGIVSAYVGNDAIPVEIGQLTLATFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     N+ ++  +        +        +++G+LE SN N + ++  +I   + +
Sbjct: 181 DAGMRPLGNNLLAATVASGDPTQANPGDPAVGILRQGYLETSNVNIIQQITDLISAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNIA 242
              +  I+  ++ M  A   I 
Sbjct: 241 EMNSKSIETADQMMSTA-NQIR 261


>gi|114762164|ref|ZP_01441632.1| flagellar basal-body rod protein FlgG [Pelagibaca bermudensis
           HTCC2601]
 gi|114545188|gb|EAU48191.1| flagellar basal-body rod protein FlgG [Roseovarius sp. HTCC2601]
          Length = 261

 Score =  157 bits (397), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 41/259 (15%), Positives = 94/259 (36%), Gaps = 21/259 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             +  I      A + R+  +++N+SN  T G+   + +F+++                 
Sbjct: 1   MRALKIAATGMSAQQMRVEVISNNLSNMSTTGYNARRAEFADLHYQQVARAGTVSAADGT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                 Q           +    G+   TG +LD A+EG  +F +  P  +   TRDG  
Sbjct: 61  MLPTGVQLGLGARPAAVTMKLAQGALSQTGGDLDLAIEGRGYFEVTLPSDLAGYTRDGAL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           K   +G +V++ G     ++                +      + + +++  + L     
Sbjct: 121 KRDGEGLIVTSDGLPVAPEIVIPDDATSLSINAEGEIYAYFNDAVEAQLLGQLTLVGFTN 180

Query: 166 SQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
            +G      +  +      P            T + G+LEDS+ + +YE+ ++I   + +
Sbjct: 181 PKGLEAIGGNLFTETEASGPPIQTTAGQDGLGTFRHGYLEDSSVDPVYEITELIEAQRGY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              + +I   ++ +   ++
Sbjct: 241 ELNSKVISAADQMLGATVQ 259


>gi|117619599|ref|YP_857341.1| flagellar basal body rod protein FlgG [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117561006|gb|ABK37954.1| flagellar basal-body rod protein FlgG [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 262

 Score =  157 bits (397), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 43/261 (16%), Positives = 93/261 (35%), Gaps = 21/261 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +  I      A +  +S  ++N++N  TVG++  +  F +++    N    +     
Sbjct: 1   MNPALWISKTGLDAQQTNISVTSNNLANASTVGYKKSRAIFEDLLYQNINQPGGRSSADT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                    +         +   G+  +T   LD  + G  +F ++ P G    TR+G+F
Sbjct: 61  ERPSGLMLGAGAKVVATQKNHSQGNVQTTDNSLDLMISGRGYFEIQLPDGSAAYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG--KVIATMGLYSVD 164
            +  +G++V+    YP+     +P          +     ++   G  +V+  +      
Sbjct: 121 TLNSEGTIVTPGNGYPLQPEIQIPENAQSVTIGEDGQVSVQLKGDGASQVVGQINTTDFV 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQK 219
            + G      +                 T     +K+G LE SN N   E+  +I   + 
Sbjct: 181 NASGLQPMGENMFVETQSSGAPVQGVAGTDGLGVIKQGMLETSNVNVTEELVNLIQAQRV 240

Query: 220 FNSITTLIDENEKSMLEAIRN 240
           +   + ++   +  M   I+ 
Sbjct: 241 YEMNSKVLSAVDGMMSFLIQR 261


>gi|146295640|ref|YP_001179411.1| flagellar basal body rod protein [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145409216|gb|ABP66220.1| flagellar basal body rod protein [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 257

 Score =  157 bits (397), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 49/260 (18%), Positives = 96/260 (36%), Gaps = 23/260 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVG---------AI 48
           M        +  +  ++ +   A+N++N  T GF+        F  ++          +I
Sbjct: 1   MIRGIYTSASGMILNQKLMDLTANNIANVSTTGFKRDIAQVESFRRMMTHKIYDDSSNSI 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF------ALESPRGIILTR 102
            N I          +       G +I T   L+ A+ G  +F             +  TR
Sbjct: 61  DNAIGYMSLGADVSRIVSDFSQGLYIKTDEPLNLAIRGSGFFAVEKVDPQTGQAQVYYTR 120

Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162
           +G F +  +G LV+  G   +         + Q      + E+G I Q G+ +  + L  
Sbjct: 121 NGAFTLNSNGELVTLEGFRVLG---QNGRIVLQNQGQIRIDEQGNIYQDGRFVDRLRLVD 177

Query: 163 VDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222
                   +  N+    +      +      V +G+LE SN NS+ EM  MI++ + + +
Sbjct: 178 FQDKTLLRKIGNNLFEADAQS--QQIAFSGRVLQGYLEGSNVNSVQEMVNMINVLRAYEA 235

Query: 223 ITTLIDENEKSMLEAIRNIA 242
                   ++++ +A+  IA
Sbjct: 236 NQKAFIAQDETLQKAVNEIA 255


>gi|62317080|ref|YP_222933.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 1 str.
           9-941]
 gi|83269073|ref|YP_418364.1| flagellar basal body rod protein FlgF [Brucella melitensis biovar
           Abortus 2308]
 gi|189022347|ref|YP_001932088.1| flagellar basal body rod protein FlgF [Brucella abortus S19]
 gi|225685989|ref|YP_002733961.1| flagellar basal body rod protein FlgF [Brucella melitensis ATCC
           23457]
 gi|237816642|ref|ZP_04595634.1| flagellar basal body rod protein FlgF [Brucella abortus str. 2308
           A]
 gi|254691431|ref|ZP_05154685.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 6 str.
           870]
 gi|254695270|ref|ZP_05157098.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 3 str.
           Tulya]
 gi|254698369|ref|ZP_05160197.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254731814|ref|ZP_05190392.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 4 str.
           292]
 gi|256256617|ref|ZP_05462153.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 9 str.
           C68]
 gi|256262885|ref|ZP_05465417.1| flagellar basal body rod protein [Brucella melitensis bv. 2 str.
           63/9]
 gi|260544321|ref|ZP_05820142.1| flagellar basal body rod protein [Brucella abortus NCTC 8038]
 gi|260757049|ref|ZP_05869397.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 6 str.
           870]
 gi|260759580|ref|ZP_05871928.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 4 str.
           292]
 gi|260762824|ref|ZP_05875156.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260882859|ref|ZP_05894473.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 9 str.
           C68]
 gi|261215636|ref|ZP_05929917.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 3 str.
           Tulya]
 gi|297249974|ref|ZP_06933675.1| flagellar basal-body rod protein FlgF [Brucella abortus bv. 5 str.
           B3196]
 gi|62197273|gb|AAX75572.1| FlgF, flagellar basal-body rod protein FlgF [Brucella abortus bv. 1
           str. 9-941]
 gi|82939347|emb|CAJ12294.1| Flagellar basal body rod protein [Brucella melitensis biovar
           Abortus 2308]
 gi|189020921|gb|ACD73642.1| Flagellar basal body rod protein [Brucella abortus S19]
 gi|225642094|gb|ACO02007.1| flagellar basal body rod protein [Brucella melitensis ATCC 23457]
 gi|237787455|gb|EEP61671.1| flagellar basal body rod protein FlgF [Brucella abortus str. 2308
           A]
 gi|260097592|gb|EEW81466.1| flagellar basal body rod protein [Brucella abortus NCTC 8038]
 gi|260669898|gb|EEX56838.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 4 str.
           292]
 gi|260673245|gb|EEX60066.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260677157|gb|EEX63978.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 6 str.
           870]
 gi|260872387|gb|EEX79456.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 9 str.
           C68]
 gi|260917243|gb|EEX84104.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 3 str.
           Tulya]
 gi|263092722|gb|EEZ16931.1| flagellar basal body rod protein [Brucella melitensis bv. 2 str.
           63/9]
 gi|297173843|gb|EFH33207.1| flagellar basal-body rod protein FlgF [Brucella abortus bv. 5 str.
           B3196]
 gi|326410315|gb|ADZ67379.1| flagellar basal body rod protein FlgF [Brucella melitensis M28]
 gi|326553608|gb|ADZ88247.1| flagellar basal body rod protein FlgF [Brucella melitensis M5-90]
          Length = 243

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 79/242 (32%), Positives = 129/242 (53%), Gaps = 4/242 (1%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
             S  +GL++ + LE+R+  +A N++N  TVGFR    KF  +V    +D    +SF  +
Sbjct: 3   NNSIYVGLSSLITLERRMDAIAHNVANASTVGFRGEGTKFDTIVSDKASD---DVSFATA 59

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
           GK Y+  E G  I T   LD A++GDAW +  +P+G + +RDGR K+   G  VS +G  
Sbjct: 60  GKSYIRTEAGPLIKTDNPLDVAVKGDAWMSFSTPQGQVYSRDGRMKMLSTGDPVSVTGNA 119

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
             LD+   PI +        +   G I Q G  +  +GLY++           SG+ P+ 
Sbjct: 120 I-LDVGGAPIVLNPGGGAPRISSDGAIYQNGVQVGAIGLYTIPADADLAYAGTSGVIPSK 178

Query: 182 PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           P  P+ D + V V +G +E SN ++M EM ++I +++ F  +  L+ + E ++ EAI+ +
Sbjct: 179 PAQPVVDDNSVGVVQGMIEGSNVDAMTEMTRLISISRAFEQVNNLLSQQEATVSEAIKTL 238

Query: 242 AS 243
            S
Sbjct: 239 GS 240


>gi|182680548|ref|YP_001834694.1| flagellar basal body rod protein FlgG [Beijerinckia indica subsp.
           indica ATCC 9039]
 gi|182636431|gb|ACB97205.1| flagellar basal-body rod protein FlgG [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 262

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 44/262 (16%), Positives = 92/262 (35%), Gaps = 21/262 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----------- 50
             + +I      A +  +  +A+N++N +T  F+  + +F++++   +            
Sbjct: 1   MKALSIAATGMAAQDLNVQVIANNIANMNTTAFKRARAEFTDLLYQAERLQGVANRGQSN 60

Query: 51  ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
              +  Q    V +         G+  +TG +LD AL G  WF + SP    + TR G F
Sbjct: 61  MIPEGAQLGLGVRTAAIRNLHVQGTLTNTGNKLDLALNGRGWFQVTSPEGETLYTRAGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQKGKVIATMGLYSVDM 165
                G LV+  G     ++               V           + I  + L +   
Sbjct: 121 STNATGQLVTTDGYLVNPNITIPTDATDVAVNQSGVVSVTRNGQTSAQQIGQLTLTNFAN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++              +       T+ +G+LE SN + + E+  +I   + +
Sbjct: 181 EAGLTPLGSNLYRQTEASGTPVSGTPGDIGFATINQGYLETSNVDPVKEITDLISAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNIA 242
              + +I   ++      +N+ 
Sbjct: 241 EMNSKVIQAADEMATTISKNMG 262


>gi|160878402|ref|YP_001557370.1| hypothetical protein Cphy_0244 [Clostridium phytofermentans ISDg]
 gi|160427068|gb|ABX40631.1| protein of unknown function DUF1078 domain protein [Clostridium
           phytofermentans ISDg]
          Length = 271

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 48/271 (17%), Positives = 99/271 (36%), Gaps = 30/271 (11%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--------- 51
           M  +   G +  ++ +  L T+++N+SN +T G++    +FS ++ +             
Sbjct: 1   MMRALWTGASGMISQQTSLDTISNNLSNINTAGYKKENAQFSSLLYSKIQSKVTDSEGKV 60

Query: 52  ---IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFK 107
              I Q  S V       S   G+   +  + D A+ G+  F++         TR+G F 
Sbjct: 61  KPVIGQVGSGVRVTGIVSSFTQGTLQESNNDWDLAISGNGLFSVRDSDGNTAYTRNGSFH 120

Query: 108 --VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA--------T 157
             +  +G  ++++  YPVL+    P+      +I  V      +                
Sbjct: 121 IAIGAEGVTLASADGYPVLNTKGQPVVFNNNWDISKVTMDEYGNLMYPDANNIAQRTGIQ 180

Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPL------EDLSGVTVKRGFLEDSNANSMYEMG 211
           +GL       G  +   S                  +L    +  G+LE SN  +  E+ 
Sbjct: 181 IGLTQFVNPAGLEKAGGSLFYETESSGAPLKEVENNNLKQSKIHTGYLEASNVQTADEIV 240

Query: 212 QMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            +I   + +   + +I   ++ + +A  N+ 
Sbjct: 241 NLIVTQRAYEMNSKVITAADEMLQQA-NNLR 270


>gi|197104381|ref|YP_002129758.1| flagellar basal-body rod protein FlgG [Phenylobacterium zucineum
           HLK1]
 gi|196477801|gb|ACG77329.1| flagellar basal-body rod protein FlgG [Phenylobacterium zucineum
           HLK1]
          Length = 262

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 40/263 (15%), Positives = 91/263 (34%), Gaps = 22/263 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             +         A +  +  +++N++N +TV F+  + +F +++                
Sbjct: 1   MQALRTAATGMAAQQLNVEVISNNIANMNTVAFKRQRAEFQDLLYQTFEAAGVQSSDQGT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V +G  Y     G+   T  +LD A++G  +F +  P      TR G  
Sbjct: 61  IVPTGVQVGAGVKAGSVYRIATQGTLTRTENKLDMAIDGRGFFQVLLPSGETAYTRAGNL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
            V D G LV+  G      +      +     +   V           ++  + L +   
Sbjct: 121 SVNDQGQLVTQDGYPIEPGITIPQDAVDVAISKSGQVQVTQAGQTAPTIVGQLELATFLN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   + ++         P  +          + +G+ E SN +++ E+  +I   + +
Sbjct: 181 EGGLQAQGSNLFKETAASGPPTNGIPGENGVGELIQGYTEASNVDAVAEITALIVAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNIAS 243
              + +I   +  +  A   + +
Sbjct: 241 EMNSKVISTADNMLATA-NQVKA 262


>gi|83646788|ref|YP_435223.1| flagellar basal body rod protein [Hahella chejuensis KCTC 2396]
 gi|83634831|gb|ABC30798.1| Flagellar basal body rod protein [Hahella chejuensis KCTC 2396]
          Length = 254

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 45/255 (17%), Positives = 99/255 (38%), Gaps = 15/255 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-------KNDID 53
           M  +  +      A ++++ T+++NM+N +TV ++  +V F ++V             I 
Sbjct: 1   MIDALYVAETGLQAGQKQIETISNNMANLNTVAYKKSRVAFGDLVSRQPAASAAEGKGIG 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDG 112
                    +  +  + G   +T  +LD A+ GD +F +    G    TR+G  K+ +DG
Sbjct: 61  SVGMGTKVAEVSMQFDSGDLKATENQLDLAIRGDGFFEVLLENGEYGYTRNGALKIDEDG 120

Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172
            L + +G     D   +P    +     +   K  I +    +  + L      Q     
Sbjct: 121 YLSTLTGLRLS-DQIQIPPDASKMQISTDGVVKVLIGEDVLEVGEIQLAKFVNDQALESA 179

Query: 173 ENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
                 P                   +++GFLE SN + + E+ +++   + + + + +I
Sbjct: 180 GQGLYIPADDAGAPLYSQAGVNGLGMIQQGFLESSNVDLVKELVELVTAQRGYQANSHVI 239

Query: 228 DENEKSMLEAIRNIA 242
              ++ M +   ++ 
Sbjct: 240 RAADEIM-QITNDLR 253


>gi|126738578|ref|ZP_01754283.1| flagellar basal-body rod protein FlgG [Roseobacter sp. SK209-2-6]
 gi|126720377|gb|EBA17083.1| flagellar basal-body rod protein FlgG [Roseobacter sp. SK209-2-6]
          Length = 261

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 41/259 (15%), Positives = 97/259 (37%), Gaps = 21/259 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             +  I      A + R+ T+++N++N +T  +   + +F+++     +           
Sbjct: 1   MRALKIAATGMSAQQLRVETISNNLANMNTTAYNARRAEFADLHYQQVSRAGTINASDGT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q    V      +    G+   T ++LD A+EG  +  +  P G    TRDG  
Sbjct: 61  VLPTGVQVGLGVRPAAISVHLNQGALKQTNSDLDVAIEGKGYLEVTLPSGQSAYTRDGAL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           K + +G +V++ G     ++      +         V    + S  G+++    L     
Sbjct: 121 KRSAEGLIVTSDGYPVSPEITIPNDALSISINPEGEVYAYFDESTAGQLLGQFNLAGFTN 180

Query: 166 SQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
            +G     ++                 +    ++++G+LE S+ +S+ E+ ++I   + +
Sbjct: 181 PKGLEALGSNLFIATEASGAANTSTAGEDGLGSLRQGYLEGSSVDSVREVTELIEAQRGY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
                +I   ++ M    +
Sbjct: 241 EMNAKVISAVDQMMGATTQ 259


>gi|319405401|emb|CBI79020.1| Flagellar basal-body rod protein flgG [Bartonella sp. AR 15-3]
          Length = 264

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 42/262 (16%), Positives = 92/262 (35%), Gaps = 21/262 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55
             S +I      A +  L  +A+NM+N +T GF+  + +F++++      +         
Sbjct: 3   MKSLSIAATGMAAQQTNLDVIANNMANINTTGFKRGRAEFADLMYVADRAVGVPNMLNQA 62

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                      V +         G+F+ TG  LD A+ G+ WF ++ P   +  TR G F
Sbjct: 63  IIPEGAMIGMGVRTAAVRTVNTQGAFVQTGNALDLAINGNGWFEIQDPNGNVFYTRSGAF 122

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-IATMGLYSVDM 165
            +++ G +++  G      +                      +    V    + L +   
Sbjct: 123 NLSETGQIITLDGNLVQPVVTIPIGSKNITVSSDGTIYYQTDTDPNAVEAGRLRLVNFVN 182

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++                      ++ +  LE SN + + EM ++I   + +
Sbjct: 183 EVGLEPIGDNLFRETQASGAPVPGDPKEDGYGSIMQAMLETSNVDPVKEMTELIAAQRSY 242

Query: 221 NSITTLIDENEKSMLEAIRNIA 242
              + +I  +++      +N+ 
Sbjct: 243 EMNSKVIQASDEMAAVVSKNLR 264


>gi|256111963|ref|ZP_05452914.1| flagellar basal body rod protein FlgF [Brucella melitensis bv. 3
           str. Ether]
 gi|265993412|ref|ZP_06105969.1| flagellar basal body rod protein FlgF [Brucella melitensis bv. 3
           str. Ether]
 gi|262764282|gb|EEZ10314.1| flagellar basal body rod protein FlgF [Brucella melitensis bv. 3
           str. Ether]
          Length = 243

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 79/242 (32%), Positives = 129/242 (53%), Gaps = 4/242 (1%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
             S  +GL++ + LE+R+  +A N++N  TVGFR    KF  +V    +D    +SF  +
Sbjct: 3   NNSIYVGLSSLITLERRMDAIAHNVANASTVGFRGEGTKFDTIVSDKASD---DLSFATA 59

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
           GK Y+  E G  I T   LD A++GDAW +  +P+G + +RDGR K+   G  VS +G  
Sbjct: 60  GKSYIRTEAGPLIKTDNPLDVAVKGDAWMSFSTPQGQVYSRDGRMKMLSTGDPVSVTGNA 119

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
             LD+   PI +        +   G I Q G  +  +GLY++           SG+ P+ 
Sbjct: 120 I-LDVGGAPIVLNPGGGAPRISSDGAIYQNGVQVGAIGLYTIPADADLAYAGTSGVIPSK 178

Query: 182 PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           P  P+ D + V V +G +E SN ++M EM ++I +++ F  +  L+ + E ++ EAI+ +
Sbjct: 179 PAQPVVDDNSVGVVQGMIEGSNVDAMTEMTRLISISRAFEQVNNLLSQQEATVSEAIKTL 238

Query: 242 AS 243
            S
Sbjct: 239 GS 240


>gi|260431748|ref|ZP_05785719.1| flagellar basal-body rod protein FlgG [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260415576|gb|EEX08835.1| flagellar basal-body rod protein FlgG [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 261

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 105/259 (40%), Gaps = 21/259 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             +  I      A + R+ T+++N++N +T G+   + +F+++                 
Sbjct: 1   MRALKIAATGMSAQQMRVETISNNLANMNTTGYNARRAEFADLHYQQMARAGTVNASDGT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q    V      +    G+  +TG++LD A+EG  +  +  P G    TRDG  
Sbjct: 61  VLPTGIQLGLGVRPAAVTVQLAQGALSATGSDLDIAIEGRGYLEVTLPNGQSAYTRDGSL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           K + +G +V++ G   V ++      +    +    V    + + +G+++    L S   
Sbjct: 121 KRSAEGLIVTSDGFPVVPEITIPDDARSISINAAGEVYAYFDDTAEGQLLGEFTLASFSN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
           ++G     ++              +       T+++G+LEDS+ +++ E+ ++I   + +
Sbjct: 181 AKGLEAIGSNLFKETEASGAPIVGTPGEDGLGTLRQGYLEDSSVDAVREVTELIEAQRGY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
                +I   ++ M    +
Sbjct: 241 EMNAKVISAVDQMMGATTQ 259


>gi|295688784|ref|YP_003592477.1| flagellar basal-body rod protein FlgG [Caulobacter segnis ATCC
           21756]
 gi|295430687|gb|ADG09859.1| flagellar basal-body rod protein FlgG [Caulobacter segnis ATCC
           21756]
          Length = 262

 Score =  157 bits (396), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 41/259 (15%), Positives = 89/259 (34%), Gaps = 21/259 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             +     +   A +  +  +++N++N +TVGF+  + +F +++                
Sbjct: 1   MQALRTAASGMSAQQLNVEVISNNIANMNTVGFKRQRAEFQDLLYQTIERAGSQSSSDGN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q    V +G  Y   E G+   T   LD A++G  +  +  P      TR G F
Sbjct: 61  IVPTGVQVGGGVKAGSVYRITEQGTPTLTDNPLDLAIQGKGYLQILLPSGETAYTRAGNF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
              D G +V+  G      +      I         V  K +   + + I  + L +   
Sbjct: 121 STNDQGQIVTEDGYTVQPGITVPQNAIDIIISKTGMVQVKLDGDPQPQTIGQLQLANFMN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++              +        + + + E SN +S+ E+  +I   + +
Sbjct: 181 EGGLEAIGDNLFLETAASGAANLAAPGQPGFGVLMQHYTEASNVDSVSEITALITAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              + +I   ++ +    +
Sbjct: 241 EMNSKVISTADQMLQTTSQ 259


>gi|262652|gb|AAB24738.1| flagellar basal body proximal rod protein [Caulobacter vibrioides]
          Length = 248

 Score =  157 bits (396), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 60/235 (25%), Positives = 108/235 (45%), Gaps = 4/235 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTI--KVKFSEVVGAIKNDIDQKISF 58
           M  +  +GL+ Q+ + + L  VA+N++N +T GF+     V+  +   A   D    + F
Sbjct: 1   MDNALYVGLSRQMTVRRELDIVANNIANANTTGFKVEDLMVRTEQAKPAKTLDGSSPVKF 60

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSAS 118
           V       +   G    TG + D A+ G  +F +++  G   TRDGRF    +G LV+ +
Sbjct: 61  VMDTGVRRNFTQGPMTKTGGDYDLAINGMGFFKVQANGGERYTRDGRFTTNPEGILVTQA 120

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178
           G  PVLD     I I  +     VG+ G +SQ    +  +GL   D    F +  ++   
Sbjct: 121 G-APVLDDGGGQITIDPRLGPVTVGKDGIVSQGAIRVGRIGLVRPDDLSTFAKDGDNLYR 179

Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
                 P + ++   + +G LE SN   + E+ ++I + + + S+  ++D   + 
Sbjct: 180 NTTNTAP-QPVTDAQIHQGMLEASNVQPVIEITKLIEIQRAYESVAKMMDNTAEL 233


>gi|254702556|ref|ZP_05164384.1| flagellar basal body rod protein FlgF [Brucella suis bv. 3 str.
           686]
 gi|261753134|ref|ZP_05996843.1| flagellar basal body rod protein FlgF [Brucella suis bv. 3 str.
           686]
 gi|261742887|gb|EEY30813.1| flagellar basal body rod protein FlgF [Brucella suis bv. 3 str.
           686]
          Length = 243

 Score =  157 bits (396), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 80/242 (33%), Positives = 130/242 (53%), Gaps = 4/242 (1%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
             S  +GL++ + LE+R+  +A N++N  TVGFR    KF  +V    +D    +SF  +
Sbjct: 3   NNSIYVGLSSLITLERRMDAIAHNVANASTVGFRGEGTKFDTIVSDKASD---DVSFATA 59

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
           GK Y+  E G  I T   LD A++GDAW +  +P+G + +RDGR K+   G LVS +G  
Sbjct: 60  GKSYIRTEAGPLIKTDNPLDVAVKGDAWMSFSTPQGQVYSRDGRMKMLSTGDLVSVTGNA 119

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
             LD+   PI +        +   G I Q G  +  +GLY++           SG+ P+ 
Sbjct: 120 I-LDVGGAPIVLNPGGGAPRISSDGAIYQNGVQVGVIGLYTIPADADLAYAGTSGVIPSK 178

Query: 182 PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           P  P+ D + V V +G +E SN ++M EM ++I +++ F  +  L+ + E ++ EAI+ +
Sbjct: 179 PAQPVVDDNSVGVVQGMIEGSNVDAMTEMTRLISISRAFEQVNNLLSQQEATVSEAIKTL 238

Query: 242 AS 243
            S
Sbjct: 239 GS 240


>gi|313903629|ref|ZP_07837019.1| fagellar hook-basal body protein [Thermaerobacter subterraneus DSM
           13965]
 gi|313466182|gb|EFR61706.1| fagellar hook-basal body protein [Thermaerobacter subterraneus DSM
           13965]
          Length = 272

 Score =  157 bits (396), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 93/249 (37%), Gaps = 12/249 (4%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIK---VKFSEVVGAIKNDIDQK--- 55
                   +  LA   +   +A +++N +T G++  +     F E++ +  +        
Sbjct: 25  LRGLYTAASGMLARVLQQERLAGDLANVNTPGYKASRNVTEAFPELLLSRLDGTGAPVVG 84

Query: 56  --ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113
              +     +       G +++TG   D ALEGD +F +  P G   TR G F V   G 
Sbjct: 85  PLGTGTVVAEPGADMRPGPWVTTGRPQDLALEGDGFFVVMGPGGPAYTRAGNFTVGSQGY 144

Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRE 173
           L +  G   +         +      F V   G++     V+ T+   +     G  R  
Sbjct: 145 LQAPDGSPVLDTTGQP---LLVGSAQFTVRPDGQVVVGDAVLGTIARVTFANPAGLRRVG 201

Query: 174 NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           ++         P    +   V++G LE SN + +  +  M+   + F +    +   +++
Sbjct: 202 DNLWQATAESGPAVPAATP-VRQGVLEQSNVDPVQVVVAMLANFRAFEAAQRAVQAQDQT 260

Query: 234 MLEAIRNIA 242
           +  AI+ + 
Sbjct: 261 LGLAIQEVG 269


>gi|121602345|ref|YP_989400.1| flagellar basal body rod protein FlgG [Bartonella bacilliformis
           KC583]
 gi|120614522|gb|ABM45123.1| flagellar basal-body rod protein FlgG [Bartonella bacilliformis
           KC583]
          Length = 264

 Score =  157 bits (396), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 40/262 (15%), Positives = 91/262 (34%), Gaps = 21/262 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55
             S +I      A +  L  +A+N++N +T G++  + +F++++      +         
Sbjct: 3   MRSLSIAATGMAAQQTNLDVIANNLANINTTGYKRARAEFADLMYVTDRAVGVPNMMNQA 62

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                      V +         G+FI TG  LD A+ G+ WF ++ P   +  TR G F
Sbjct: 63  IVPEGVMVGMGVRTAAVRTVNTQGAFIQTGNALDLAINGNGWFEIQDPNGNVFYTRSGAF 122

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEK-GEISQKGKVIATMGLYSVDM 165
            +++ G +V+  G      +                                + L +   
Sbjct: 123 NLSETGQVVTLDGNVVQPAITIPIGSKSITVSPDGTVFYKPAEEADPVEAGRLNLVNFVN 182

Query: 166 SQGFVRRENSGISPNIPPTPLEDLS-----GVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++              +       ++ +  LE SN + + E+ ++I   + +
Sbjct: 183 EVGLEPVGDNLFRETPASGAPVPGNPKEDGYGSIMQATLEASNVDPVKEITELITAQRSY 242

Query: 221 NSITTLIDENEKSMLEAIRNIA 242
              + +I  +++      +N+ 
Sbjct: 243 EMTSKVIQASDEMAAVVSKNLR 264


>gi|254470342|ref|ZP_05083746.1| flagellar basal-body rod protein [Pseudovibrio sp. JE062]
 gi|211960653|gb|EEA95849.1| flagellar basal-body rod protein [Pseudovibrio sp. JE062]
          Length = 246

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 66/249 (26%), Positives = 114/249 (45%), Gaps = 12/249 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK-----NDIDQK 55
           M+ +  IGL+ Q AL + L  VA+N++N +T G++  ++ F E +            D+ 
Sbjct: 1   MENAQLIGLSRQSALRRNLDVVANNLANINTTGYKAQRLIFEEYLMPTAQATEFQRPDRP 60

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSL 114
           +SF            GS   TG  LD A+EGD + A+    G    TR G   +  +G+L
Sbjct: 61  LSFTQDVGTATVLTQGSIQLTGNPLDVAIEGDGYLAVTGAEGEQFYTRAGSLAIDPEGTL 120

Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174
           V+  G   + D    PIQI  +D    + ++G IS     I  + +Y+ D  Q       
Sbjct: 121 VTDGGLPVLAD--GAPIQINPEDGEITITKEGVISTGQGEIGRLDVYTFDNRQELKHVGV 178

Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
           +              +  TV +G LE SN   + E+ +MI +T+++ S++ ++ +  +  
Sbjct: 179 NLF----SGLNPIPANNPTVIQGALEGSNVEGVREISRMIEITRQYQSVSKMMSQRNELR 234

Query: 235 LEAIRNIAS 243
             +IR + S
Sbjct: 235 QRSIRELGS 243


>gi|229542504|ref|ZP_04431564.1| flagellar basal-body rod protein FlgF [Bacillus coagulans 36D1]
 gi|229326924|gb|EEN92599.1| flagellar basal-body rod protein FlgF [Bacillus coagulans 36D1]
          Length = 262

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 53/263 (20%), Positives = 108/263 (41%), Gaps = 24/263 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKN------- 50
           M        +  +A +++   +A+N+SN DT G++T +     F +++ +  +       
Sbjct: 1   MLRGLYTAASGMIAQQRKTDLLANNLSNADTPGYKTDQSSIRSFPKMLLSYMDKNGTTGE 60

Query: 51  ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALE------GDAWFALESPR-GIIL 100
               +    + V   +     + G    TG   D A+       G  +F ++      + 
Sbjct: 61  VVKSVGSLATGVYMQETLPLFKQGDLEETGNRTDLAIFDQASPEGSLFFRIDDGNGHEVY 120

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           TR+G F V  +G L +ASG Y + +      +I      F+V   G +++ G+   T+GL
Sbjct: 121 TRNGNFTVNPEGYLTTASGHYVLDENGG---RIRTGGTDFSVDAAGAVTENGRYAGTIGL 177

Query: 161 YSVDMSQGFVRRENSGIS-PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
                     +  +   +  N    P    +G  +K+GFLE SN +    M  M+   + 
Sbjct: 178 AYAQNPAQLEKTGDGLYTLANNGALPAAGQNGFQIKQGFLESSNVDETKTMTDMMSAYRS 237

Query: 220 FNSITTLIDENEKSMLEAIRNIA 242
           F +   ++   + S+ +A+ ++ 
Sbjct: 238 FEANQKVLQAYDASLGKAVNDVG 260


>gi|23499891|ref|NP_699331.1| flagellar basal body rod protein FlgF [Brucella suis 1330]
 gi|148558748|ref|YP_001257194.1| flagellar basal body rod protein FlgF [Brucella ovis ATCC 25840]
 gi|163844323|ref|YP_001621978.1| flagellar basal body rod protein FlgF [Brucella suis ATCC 23445]
 gi|225628603|ref|ZP_03786637.1| flagellar basal body rod protein FlgF [Brucella ceti str. Cudo]
 gi|254699439|ref|ZP_05161267.1| flagellar basal body rod protein FlgF [Brucella suis bv. 5 str.
           513]
 gi|254706314|ref|ZP_05168142.1| flagellar basal body rod protein FlgF [Brucella pinnipedialis
           M163/99/10]
 gi|254711394|ref|ZP_05173205.1| flagellar basal body rod protein FlgF [Brucella pinnipedialis
           B2/94]
 gi|254711993|ref|ZP_05173804.1| flagellar basal body rod protein FlgF [Brucella ceti M644/93/1]
 gi|254715063|ref|ZP_05176874.1| flagellar basal body rod protein FlgF [Brucella ceti M13/05/1]
 gi|256029976|ref|ZP_05443590.1| flagellar basal body rod protein FlgF [Brucella pinnipedialis
           M292/94/1]
 gi|256158141|ref|ZP_05456057.1| flagellar basal body rod protein FlgF [Brucella ceti M490/95/1]
 gi|256252908|ref|ZP_05458444.1| flagellar basal body rod protein FlgF [Brucella ceti B1/94]
 gi|261216770|ref|ZP_05931051.1| flagellar basal body rod protein FlgF [Brucella ceti M13/05/1]
 gi|261219997|ref|ZP_05934278.1| flagellar basal body rod protein FlgF [Brucella ceti B1/94]
 gi|261313761|ref|ZP_05952958.1| flagellar basal body rod protein FlgF [Brucella pinnipedialis
           M163/99/10]
 gi|261319000|ref|ZP_05958197.1| flagellar basal body rod protein FlgF [Brucella pinnipedialis
           B2/94]
 gi|261319637|ref|ZP_05958834.1| flagellar basal body rod protein FlgF [Brucella ceti M644/93/1]
 gi|261749890|ref|ZP_05993599.1| flagellar basal body rod protein FlgF [Brucella suis bv. 5 str.
           513]
 gi|265986997|ref|ZP_06099554.1| flagellar basal body rod protein FlgF [Brucella pinnipedialis
           M292/94/1]
 gi|265996658|ref|ZP_06109215.1| flagellar basal body rod protein FlgF [Brucella ceti M490/95/1]
 gi|294853152|ref|ZP_06793824.1| flagellar basal-body rod protein FlgF [Brucella sp. NVSL 07-0026]
 gi|23463466|gb|AAN33336.1| flagellar basal-body rod protein FlgF [Brucella suis 1330]
 gi|148370033|gb|ABQ62905.1| flagellar basal-body rod protein FlgF [Brucella ovis ATCC 25840]
 gi|163675046|gb|ABY39156.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
 gi|225616449|gb|EEH13497.1| flagellar basal body rod protein FlgF [Brucella ceti str. Cudo]
 gi|260918581|gb|EEX85234.1| flagellar basal body rod protein FlgF [Brucella ceti B1/94]
 gi|260921859|gb|EEX88427.1| flagellar basal body rod protein FlgF [Brucella ceti M13/05/1]
 gi|261292327|gb|EEX95823.1| flagellar basal body rod protein FlgF [Brucella ceti M644/93/1]
 gi|261298223|gb|EEY01720.1| flagellar basal body rod protein FlgF [Brucella pinnipedialis
           B2/94]
 gi|261302787|gb|EEY06284.1| flagellar basal body rod protein FlgF [Brucella pinnipedialis
           M163/99/10]
 gi|261739643|gb|EEY27569.1| flagellar basal body rod protein FlgF [Brucella suis bv. 5 str.
           513]
 gi|262550955|gb|EEZ07116.1| flagellar basal body rod protein FlgF [Brucella ceti M490/95/1]
 gi|264659194|gb|EEZ29455.1| flagellar basal body rod protein FlgF [Brucella pinnipedialis
           M292/94/1]
 gi|294818807|gb|EFG35807.1| flagellar basal-body rod protein FlgF [Brucella sp. NVSL 07-0026]
          Length = 243

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 80/242 (33%), Positives = 130/242 (53%), Gaps = 4/242 (1%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
             S  +GL++ + LE+R+  +A N++N  TVGFR    KF  +V    +D    +SF  +
Sbjct: 3   NNSIYVGLSSLITLERRMDAIAHNVANASTVGFRGEGTKFDTIVSDKASD---DVSFATA 59

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
           GK Y+  E G  I T   LD A++GDAW +  +P+G + +RDGR K+   G LVS +G  
Sbjct: 60  GKSYIRTEAGPLIKTDNPLDVAVKGDAWMSFSTPQGQVYSRDGRMKMLSTGDLVSVTGNA 119

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
             LD+   PI +        +   G I Q G  +  +GLY++           SG+ P+ 
Sbjct: 120 I-LDVGGAPIVLNPGGGAPRISSDGAIYQNGVQVGAIGLYTIPADADLAYAGTSGVIPSK 178

Query: 182 PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           P  P+ D + V V +G +E SN ++M EM ++I +++ F  +  L+ + E ++ EAI+ +
Sbjct: 179 PAQPVVDDNSVGVVQGMIEGSNVDAMTEMTRLISISRAFEQVNNLLSQQEATVSEAIKTL 238

Query: 242 AS 243
            S
Sbjct: 239 GS 240


>gi|86750895|ref|YP_487391.1| flagellar basal body rod protein FlgF [Rhodopseudomonas palustris
           HaA2]
 gi|86573923|gb|ABD08480.1| Flagellar basal body rod protein [Rhodopseudomonas palustris HaA2]
          Length = 253

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 61/251 (24%), Positives = 119/251 (47%), Gaps = 11/251 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND-----IDQK 55
           MQ +  +GL+ Q+ LE+++  VA+N++N +T GF+  +  F E +    ++      D++
Sbjct: 1   MQNTLLVGLSRQVVLERQMDVVANNLANMNTNGFKAQRSVFQEYLNTGAHEDNFQRPDRR 60

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115
           +SFV     YL    G    T   LD A++G A+  +++P G   TRDG+  +   G LV
Sbjct: 61  VSFVQDRAAYLDFSTGPMTQTKDPLDVAIDGSAFLVVQTPAGERFTRDGKLSINPRGQLV 120

Query: 116 SASGKYPVLDM----ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171
           ++SG   + +          +     +  NV      +    +   + L S    Q   +
Sbjct: 121 NSSGYPVLGNSGPIVFQPTDKAINIAQDGNVSVVEGTATIDSLRGKLRLVSFARPQSLEK 180

Query: 172 RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
           + ++  +      P    +   V++G++E SN NS+ EM +M+ +T+ +  +++L+ +  
Sbjct: 181 QGDNLFAATSD--PGAPDTKAIVRQGYVEKSNVNSVLEMTRMLDVTRSYQKMSSLLQQEG 238

Query: 232 KSMLEAIRNIA 242
                AI  +A
Sbjct: 239 DLQKTAIERLA 249


>gi|197335127|ref|YP_002156698.1| flagellar basal-body rod protein FlgG [Vibrio fischeri MJ11]
 gi|197316617|gb|ACH66064.1| flagellar basal-body rod protein FlgG [Vibrio fischeri MJ11]
          Length = 262

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 46/262 (17%), Positives = 91/262 (34%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +  +      A +  ++T+++N++N  TVGF+  +  F ++     N    +     
Sbjct: 1   MNPALWVSKTGLDAQQTNIATISNNLANASTVGFKKSRAVFEDLFYQNVNQAGAQSTQNT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    S             G+  +T   +D  +EG  +F +  P   I  TR+G+F
Sbjct: 61  ELPTGLMLGSGSKVVATQKVFTNGNAQTTSNGMDMMIEGKGFFQVTMPDGNIGYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG--EISQKGKVIATMGLYSVD 164
            + D+G++V+    Y +     VP          +          Q  +VI  +      
Sbjct: 121 TLNDEGAIVTTGAGYRLEPEIVVPEDAINVTVGTDGEVSVRLRGQQDNQVIGQINTVDFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +   P       ++          V++  LE SN N   E+  MI   + 
Sbjct: 181 NPGGLEPVGQNLYLPTGASGDPQEGTPGLEGFGAVRQSMLEASNVNVTEELVNMIEAQRV 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   +K      + +
Sbjct: 241 YEMNSKVISAVDKMASFVNQQL 262


>gi|254437698|ref|ZP_05051192.1| flagellar basal-body rod protein FlgG [Octadecabacter antarcticus
           307]
 gi|198253144|gb|EDY77458.1| flagellar basal-body rod protein FlgG [Octadecabacter antarcticus
           307]
          Length = 257

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 44/257 (17%), Positives = 99/257 (38%), Gaps = 20/257 (7%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--------- 55
            ++      A + R+  +A+N+SN +TVGF++ +V F  ++  +      +         
Sbjct: 1   MHVAKTGLNAQQTRMQVIANNLSNLNTVGFKSDRVNFESLLYQVSRAGGDQTSEGTALTS 60

Query: 56  ----ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTD 110
                + V +         G  ++T    D A++G  +F +  P   +  TR+G F  + 
Sbjct: 61  ALALGTGVRAVNTQKLYTQGGMVNTDNSFDLAIDGQGFFQVLMPDGRVGYTRNGSFSRSA 120

Query: 111 DGSLVSASGKYPVLDMASVPIQIP-QKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169
           DG++ +ASG     ++      +     +   V  +    +  + +  + L +    +G 
Sbjct: 121 DGTMTTASGYVIQPEIRIPDEAVEVNISQDGIVSVRSSGQEVAQEVGQLSLATFANPRGL 180

Query: 170 VRRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224
                S +              +      + +G LE SN N + ++ +MI   + +   +
Sbjct: 181 QPIGESFVVETTASGAATVAAPQSQGLGKLMQGALEASNVNVVQQLVEMIETQRAYEVSS 240

Query: 225 TLIDENEKSMLEAIRNI 241
             I  +++ M     N+
Sbjct: 241 KAITSSDEMMRYISNNL 257


>gi|319409187|emb|CBI82831.1| Flagellar basal-body rod protein flgG [Bartonella schoenbuchensis
           R1]
          Length = 264

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 40/262 (15%), Positives = 93/262 (35%), Gaps = 21/262 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55
             S +I      A +  L  +A+N++N +T GF+  + +F++++      +         
Sbjct: 3   MRSLSIAATGMAAQQTNLDVIANNLANINTTGFKRARAEFADLMYVADRAVGVPNMLNQA 62

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                      V +         G+F+ TG  LD A+ G+ WF ++ P   +  TR G F
Sbjct: 63  IVPEGAMIGMGVRTAAVRKVNMQGAFVQTGNALDLAINGNGWFEVQDPNGNVFYTRSGAF 122

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
            +++ G + +  G      +                V  + ++         + L +   
Sbjct: 123 NLSETGQIETLDGNLVQPAITIPIGSKNITVSPDGTVYYQTDMDPTPVEAGRLNLVNFVN 182

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
           + G     ++                       + +  LE SN + + E+ ++I   + +
Sbjct: 183 AVGLEAVGDNLFRETPASGAPVPGFPKDDGYGGIMQAMLESSNVDPVKEITELIAAQRSY 242

Query: 221 NSITTLIDENEKSMLEAIRNIA 242
              + +I  +++      +N+ 
Sbjct: 243 EMNSKVIQASDEMAAVVSKNLR 264


>gi|261253612|ref|ZP_05946185.1| flagellar basal-body rod protein FlgG [Vibrio orientalis CIP
           102891]
 gi|260937003|gb|EEX92992.1| flagellar basal-body rod protein FlgG [Vibrio orientalis CIP
           102891]
          Length = 262

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 46/262 (17%), Positives = 94/262 (35%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +  +      A +  +ST+++N++N  TVG++  +  F ++     N    +     
Sbjct: 1   MHPALWVSKTGLDAQQTNISTISNNLANASTVGYKKSRAVFEDLFYQNINQPGGQSSQNT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    +             G+  +T   LD  +EGD +F +  P   I  +R+G+F
Sbjct: 61  ELPSGLMLGAGSKVVATQKVHTQGNTQTTNNSLDMMIEGDGFFQILMPDGNIGYSRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD--EIFNVGEKGEISQKGKVIATMGLYSVD 164
            V D+G +V++   Y +    ++P             V  +    Q  +V+  +      
Sbjct: 121 TVNDEGVIVTSGAGYALEPEIAIPEDAQSITIGTDGEVSVRIRGQQDNQVVGQIATVDFV 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +           ++          V++  LE SN N   E+  MI   + 
Sbjct: 181 NPGGLEPIGQNLYMATGASGDPQEGVPGFDGFGDVRQSMLETSNVNVTEELVNMIEAQRV 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   +K M    + +
Sbjct: 241 YEMNSKVISAVDKMMSFVNQQL 262


>gi|90422600|ref|YP_530970.1| flagellar basal body rod protein FlgF [Rhodopseudomonas palustris
           BisB18]
 gi|90104614|gb|ABD86651.1| flagellar basal body rod protein [Rhodopseudomonas palustris
           BisB18]
          Length = 243

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 79/242 (32%), Positives = 130/242 (53%), Gaps = 4/242 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           MQ++  + L+AQ++LE+RL T+A+NM+N  T  FR   VKF   +    +   Q ++F  
Sbjct: 1   MQSALYVSLSAQVSLEKRLETIANNMANMKTTAFRADAVKFETALSRAAS---QPVAFAT 57

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
            G  ++S+  GS   TG  LD A+ G++W     P G + TRDGR +++  G L + +G 
Sbjct: 58  PGDNFISRAAGSVTQTGNNLDVAVVGNSWMGFTGPSGPVYTRDGRMQISSTGELQTITGY 117

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
            PVLD    PI +        +   G ISQ    +  +GL+ +       R  NSG+ P+
Sbjct: 118 -PVLDAGGTPIIVDPDAGPLTISRNGTISQGTNEVGMLGLFEIAADAKLARFANSGVVPD 176

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
              T + D      ++G++E SN + + EM Q++  T+ F S+++LI+ +E +M  AIR 
Sbjct: 177 RGATAVVDFINTGFQQGYVEGSNVDPLSEMTQLMTATRAFQSVSSLIESSEGTMQNAIRT 236

Query: 241 IA 242
           + 
Sbjct: 237 LG 238


>gi|59712479|ref|YP_205255.1| flagellar basal body rod protein FlgG [Vibrio fischeri ES114]
 gi|59480580|gb|AAW86367.1| flagellar distal rod protein FlgG [Vibrio fischeri ES114]
          Length = 262

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 46/262 (17%), Positives = 91/262 (34%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +  +      A +  ++T+++N++N  TVGF+  +  F ++     N    +     
Sbjct: 1   MNPALWVSKTGLDAQQTNIATISNNLANASTVGFKKSRAVFEDLFYQNVNQAGAQSTQNT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    S             G+  +T   +D  +EG  +F +  P   I  TR+G+F
Sbjct: 61  ELPTGLMLGSGSKVVATQKVFTNGNAQTTSNGMDMMIEGKGFFQVTMPDGNIGYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG--EISQKGKVIATMGLYSVD 164
            + D+G++V+    Y +     VP          +          Q  +VI  +      
Sbjct: 121 TLNDEGAIVTTGAGYRLEPEIVVPEDAINVTVGTDGEVSVRLRGQQDNQVIGQINTVDFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +   P       ++          V++  LE SN N   E+  MI   + 
Sbjct: 181 NPGGLEPVGQNLYLPTGASGDPQEGTPGLDGFGAVRQSMLEASNVNVTEELVNMIEAQRV 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   +K      + +
Sbjct: 241 YEMNSKVISAVDKMASFVNQQL 262


>gi|254470407|ref|ZP_05083811.1| flagellar basal-body rod protein FlgG [Pseudovibrio sp. JE062]
 gi|211960718|gb|EEA95914.1| flagellar basal-body rod protein FlgG [Pseudovibrio sp. JE062]
          Length = 260

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 41/258 (15%), Positives = 91/258 (35%), Gaps = 20/258 (7%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             + +I      A E  +  +++N++N  T G++  +  F +++   +  +         
Sbjct: 1   MKALHIAATGMKAQELNVEVISNNVANMRTTGYKRQRADFQDLLYENQRRMGTETSDAGT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                 Q  S V +         GS   TG E D  + G+ +F ++ P G I  TRDG F
Sbjct: 61  IVPNGVQIGSGVRTAATTRIMSPGSVTQTGNEYDVTIRGEGFFQIQRPDGTIGYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
             +  G LV+  G      +            +  + +  + + +   +  +        
Sbjct: 121 ARSQTGQLVTKDGYPVQPGITIPDNARDVTINVQGLVQAMDDNDQVLNLGQLETARFTNQ 180

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFN 221
            G     ++         P +  +  T     + +  LE SN +++ E+  +I   + + 
Sbjct: 181 AGLEAIGDNLFLETPASGPPQLNNPGTAGFGNILQRHLESSNVDAVTELSSLISAQRAYE 240

Query: 222 SITTLIDENEKSMLEAIR 239
             + +I   ++       
Sbjct: 241 MNSKIIKAADEMYSTTTN 258


>gi|172057880|ref|YP_001814340.1| hypothetical protein Exig_1871 [Exiguobacterium sibiricum 255-15]
 gi|171990401|gb|ACB61323.1| protein of unknown function DUF1078 domain protein [Exiguobacterium
           sibiricum 255-15]
          Length = 278

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 48/275 (17%), Positives = 96/275 (34%), Gaps = 36/275 (13%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++     + +L  V +N++N +T G++  +V F ++V               
Sbjct: 1   MLRSMYSGISGLKNFQTKLDVVGNNIANVNTFGYKKGRVTFKDLVSQSVGSASGNGGGVG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                Q     +          G+  +TG  LD A+ G+ +F +++  GI   R G F  
Sbjct: 61  GANPKQVGLGASMATVDSVSNQGALQNTGRTLDVAISGEGFFQIQTADGIRYARSGNFYT 120

Query: 109 TDDGSLVSASGKYPVLDMAS-------------------VPIQIPQKDEIFNVGEKGEIS 149
             DG+LV+  G Y +    +                                +    + +
Sbjct: 121 DLDGNLVTGDGNYVIGSDNAGPLGQPTIPLGGGYKTINIPANAQNLSIGKDGLVTYVDPA 180

Query: 150 QKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNA 204
              +    + L +     G  +  ++  S +         +  T     +  G LE SN 
Sbjct: 181 GTLQQAGYISLANFPNPGGLEKSGSNMYSISQNSGQPTSATPSTNGLGQLTSGTLEMSNV 240

Query: 205 NSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +   E  +MI   + F + T +I  +++ + E + 
Sbjct: 241 DLSEEFTEMIIAQRGFQANTRIITTSDQILEELVN 275


>gi|254292906|ref|YP_003058929.1| flagellar basal-body rod protein FlgF [Hirschia baltica ATCC 49814]
 gi|254041437|gb|ACT58232.1| flagellar basal-body rod protein FlgF [Hirschia baltica ATCC 49814]
          Length = 255

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 66/255 (25%), Positives = 116/255 (45%), Gaps = 16/255 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV--VGAIKNDIDQKISF 58
           M  S  IGL+ Q  L +++   A+N++N +T GF+   +   E+    A   D    I+F
Sbjct: 1   MDNSLAIGLSTQQLLRKKMDVTANNLANMNTTGFKVEHLVNHEISDRPARATDKPHDITF 60

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSA 117
               +       GS   TG  LD A++G+ +F +E+    I  TRDG F +  DG LV+ 
Sbjct: 61  TQGWQLQRDMNNGSIAQTGNPLDVAIDGNGFFEVEAENGDIFYTRDGEFSMNPDGMLVTR 120

Query: 118 SGKYPVLDM----------ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           +G     +             VPI +  +     + + G I Q G  +  + L + ++ +
Sbjct: 121 NGYLLRGEGEVLDGEKLLANGVPIALNPEGGEIVINKDGSIMQDGAQLGQLKLKTFELPE 180

Query: 168 GFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
              +  N+     I        +  T+ +GF+E SN +++ EM QMI +++ + S+  LI
Sbjct: 181 ALEKVGNNLY---ISGEQEPIDANATLAQGFVESSNVSAIVEMTQMIEISRAYQSVAKLI 237

Query: 228 DENEKSMLEAIRNIA 242
             +     +AI  +A
Sbjct: 238 SNSNDMREKAINKLA 252


>gi|163733142|ref|ZP_02140586.1| flagellar basal-body rod protein FlgF, putative [Roseobacter
           litoralis Och 149]
 gi|161393677|gb|EDQ18002.1| flagellar basal-body rod protein FlgF, putative [Roseobacter
           litoralis Och 149]
          Length = 237

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 71/241 (29%), Positives = 113/241 (46%), Gaps = 6/241 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M+ S    +  Q  L + +  VA+N++N  T GFR   V FSE V ++  D    +S   
Sbjct: 1   MENSGYTTITRQSGLAKEMRVVANNIANAATSGFRQEGVIFSEYVKSV--DGASSLSMGQ 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           +     S   G    TG + DFA+EGD +F +E+P G  LTR G F    DG LV+  G 
Sbjct: 59  ADARNTSFAQGGLTQTGGQFDFAIEGDGFFLVETPLGERLTRAGAFSPNADGDLVTPDGY 118

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
              LD    P+ IP   E   V   G IS  G  +  +GL      QG +R +      +
Sbjct: 119 RV-LDAGGAPVFIPPGAEDIAVSADGTISTNGDPVGQLGLVQPLNPQGLLREDGVMFRAD 177

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
               P E      + + F+E+SN N + ++ +MI + + +    + ++  ++ + +A+R 
Sbjct: 178 EGYEPAEQG---RILQSFVENSNVNPILQLTRMIEVQRAYELGASFLEAEDERVRQAMRT 234

Query: 241 I 241
           I
Sbjct: 235 I 235


>gi|256059629|ref|ZP_05449826.1| flagellar basal body rod protein FlgF [Brucella neotomae 5K33]
 gi|261323599|ref|ZP_05962796.1| flagellar basal body rod protein FlgF [Brucella neotomae 5K33]
 gi|261299579|gb|EEY03076.1| flagellar basal body rod protein FlgF [Brucella neotomae 5K33]
          Length = 243

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 80/242 (33%), Positives = 130/242 (53%), Gaps = 4/242 (1%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
             S  +GL++ + LE+R+  +A N++N  TVGFR    KF  +V    +D    +SF  +
Sbjct: 3   NNSIYVGLSSLITLERRMDAIAHNVANASTVGFRGEGTKFDTIVSDKASD---DVSFATA 59

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
           GK Y+  E G  I T   LD A++GDAW +  +P+G + +RDGR K+   G LVS +G  
Sbjct: 60  GKSYIRTEAGPLIKTDNPLDVAVKGDAWMSFSTPQGQVYSRDGRMKMLSTGDLVSVTGNA 119

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
             LD+   PI +        +   G I Q G  +  +GLY++           SG+ P+ 
Sbjct: 120 I-LDVGGAPIVLNPGGGAPRISSDGAIYQNGVQVGAIGLYTIPADADLAYAGTSGVIPSK 178

Query: 182 PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           P  P+ D + V V +G +E SN ++M EM ++I +++ F  +  L+ + E ++ EAI+ +
Sbjct: 179 PAQPVVDDNSVGVVQGMIESSNVDAMTEMTRLISISRAFEQVNNLLSQQEATVSEAIKTL 238

Query: 242 AS 243
            S
Sbjct: 239 GS 240


>gi|328958276|ref|YP_004375662.1| flagellar basal body rod protein FlgG [Carnobacterium sp. 17-4]
 gi|328674600|gb|AEB30646.1| flagellar basal body rod protein FlgG [Carnobacterium sp. 17-4]
          Length = 289

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 54/286 (18%), Positives = 99/286 (34%), Gaps = 47/286 (16%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN------DIDQ 54
           M  S   G+     ++ ++  +++N++N +T  F+T +V+F +++           +  Q
Sbjct: 1   MLKSLYSGVTGMKNIQTKMDVISNNIANVNTTAFKTGRVRFEDMLSQTNASAQAGINAQQ 60

Query: 55  KISFVASGKEYLSKEVGSFISTGTELDFALEG--DAWFALESPRGIILTRDGRFKVTDDG 112
               V  G        GS  STG  LDF +E    ++F +        TRDG       G
Sbjct: 61  VGLGVQVGSIDTVMTGGSLQSTGRALDFGIENGDSSFFTVTDGTNTFYTRDGGLYADPSG 120

Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI----------------- 155
           +LV++SG          P          ++G   E     + I                 
Sbjct: 121 NLVTSSGLQVQGYSQGAPATNDAAFVPGSLGTTMEPINIPQTIPNPDGGDALELQSYSVD 180

Query: 156 -----------------ATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS-----GVT 193
                              +GL S     G  +   +  S +         +       +
Sbjct: 181 NDGFIVGSYSGGKSMVLGRVGLTSFSNPDGLQKNGGNLYSASANSGDPVAGNPGDAGYGS 240

Query: 194 VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           V+ GFLE SN +   E  +MI  ++ + + +  I  ++  + E I 
Sbjct: 241 VRSGFLEMSNVDLANEFTEMIVTSRSYQANSRSITTSDTMLEELIN 286


>gi|307293785|ref|ZP_07573629.1| flagellar basal-body rod protein FlgG [Sphingobium chlorophenolicum
           L-1]
 gi|306879936|gb|EFN11153.1| flagellar basal-body rod protein FlgG [Sphingobium chlorophenolicum
           L-1]
          Length = 262

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 44/258 (17%), Positives = 88/258 (34%), Gaps = 20/258 (7%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK-------- 55
           + ++      A   ++  +A+N++N +T  F+  +  F  +                   
Sbjct: 5   ALHVARTGLDAQNTKMRVIANNLANVNTTAFKRDRADFETLAYQQIVAAGANSDSENKFA 64

Query: 56  -----ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVT 109
                 S VA          G+   TG  LD A+EG  +F ++ P   I  TR G F  T
Sbjct: 65  TGLNLGSGVALQGTSKINAQGTLNQTGNTLDMAIEGSGYFQVQQPDGSIAYTRAGNFTTT 124

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDMSQG 168
            +G +V++ G   +  +                     +   +   +  + L S     G
Sbjct: 125 AEGVVVTSDGLPLIPQITVPEGATSITIGNDGTVSATLQGQTEPTQLGQVELASFMNPGG 184

Query: 169 FVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223
                 + +         +           V+ G+LE SN N + E+  MI   + +   
Sbjct: 185 LQSTGGNLLKETAASGTPQVGVAGLDGRGVVRSGYLETSNVNVVEELVDMIETQRAYEVN 244

Query: 224 TTLIDENEKSMLEAIRNI 241
           + +I   ++ +  A + +
Sbjct: 245 SKMIKATDEMLQYANQQL 262


>gi|92116936|ref|YP_576665.1| flagellar basal body rod protein FlgG [Nitrobacter hamburgensis
           X14]
 gi|91799830|gb|ABE62205.1| Flagellar basal-body rod FlgG [Nitrobacter hamburgensis X14]
          Length = 262

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 40/257 (15%), Positives = 88/257 (34%), Gaps = 21/257 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55
             +         A E  +  +++N++N  T G++  +  F +++      +  +      
Sbjct: 1   MRALYTAATGMAAQELNVQVISNNIANLRTTGYKKQRAAFQDLIYDHVRRVGAQASDQGT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                      V +         G+   TG +LD A+ G+ +F ++ P G    TRDG F
Sbjct: 61  ILPVGIDLGGGVKTVGTPRLMSQGTLSQTGNDLDIAIRGEGFFKIQMPDGTYQYTRDGTF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165
           ++ + G +V+A G      +                            V+  +GL     
Sbjct: 121 QMDNQGRIVNAQGNPVQPTITIPQNSAGITINAQGQVSVTLPGQTTPTVLGQIGLTRFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++  +      P +D          +++  LE +N   + E+  +I   + +
Sbjct: 181 KAGLQPVGDNNFTETPASGPPQDGIANIDGYGDMQQSSLEQANVEVVSEISDLIAAQRAY 240

Query: 221 NSITTLIDENEKSMLEA 237
                +I   ++ +  A
Sbjct: 241 EMNAKVISAADQMLQSA 257


>gi|254477684|ref|ZP_05091070.1| flagellar basal-body rod protein FlgG [Ruegeria sp. R11]
 gi|214031927|gb|EEB72762.1| flagellar basal-body rod protein FlgG [Ruegeria sp. R11]
          Length = 261

 Score =  156 bits (394), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 101/259 (38%), Gaps = 21/259 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             +  I      A + R+ T+++N++N +T G+   + +F+++                 
Sbjct: 1   MRALKIAATGMTAQQLRVETISNNLANMNTTGYNARRAEFADLHYQQVTRAGTVNASDGT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q    V +    +    G+   TG +LD A++G  +  +  P G    TRDG  
Sbjct: 61  VLPTGVQVGLGVRASAISIHLAQGALTQTGNDLDVAIDGKGYLEVTLPSGQSAYTRDGSL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           K + +G +V++ G     D+      +    +    V    + + +G+++  + L     
Sbjct: 121 KRSAEGLIVTSDGFTVSPDITIPADARNVSINADGEVYAYFDETAEGQLMGQLTLAGFSN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
            +G     ++              S       T+++G+LE S+ +++ E+ ++I   + +
Sbjct: 181 PKGLEALGSNLFVETEASGAATVASPGENGLGTLRQGYLEASSVDAVREVTELIEAQRGY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
                +I   ++ M    +
Sbjct: 241 EMNAKVISAVDQMMGATTQ 259


>gi|254473360|ref|ZP_05086757.1| flagellar basal body rod protein [Pseudovibrio sp. JE062]
 gi|211957476|gb|EEA92679.1| flagellar basal body rod protein [Pseudovibrio sp. JE062]
          Length = 241

 Score =  156 bits (394), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 79/239 (33%), Positives = 133/239 (55%), Gaps = 4/239 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           S  + L+ Q+ALE+RL TVA N++N +T G+R  +VKF  +V   K      ++F ++G+
Sbjct: 5   SLYVSLSGQMALERRLETVARNVANMETAGYRADEVKFDSLV---KRPGKDPVTFASTGE 61

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPV 123
            Y+S++ G+   TG  LD A+EG  W  +++  G+  TRDGRF++  DG L S  G  PV
Sbjct: 62  NYISRQAGAIKQTGNSLDVAIEGSGWLGIQTGNGVAYTRDGRFQIGVDGILRSIEGN-PV 120

Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183
           LD  + PI +        + + G I Q+G+ +  +GL+S+       R  NSG+ P+   
Sbjct: 121 LDSGNAPIILDPLGGPPEISKDGTIYQEGRQVGVLGLFSIPEDAKLSRTGNSGVIPDAIA 180

Query: 184 TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            P+ D +     +GF+E +N N + E+ ++I +T+ F S  +++   E    + IR + 
Sbjct: 181 EPVLDFAENGFAQGFVEGANINPISEITKLITITRAFESTNSMMQSVESIRQQTIRKLG 239


>gi|149912834|ref|ZP_01901368.1| flagellar basal-body rod protein FlgG [Roseobacter sp. AzwK-3b]
 gi|149813240|gb|EDM73066.1| flagellar basal-body rod protein FlgG [Roseobacter sp. AzwK-3b]
          Length = 261

 Score =  156 bits (394), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 97/259 (37%), Gaps = 21/259 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             +  I      A + R+ T+++N++N  T G+ T + +FS++                 
Sbjct: 1   MRALKIAATGMTAQQLRVETISNNLANMSTTGYNTRRAEFSDLHYQQMARPGTVNASDGT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q    V      +    GS  +T  +LD A++G+ +  +  P G    TRDG  
Sbjct: 61  VLPTGVQLGLGVRPAAVSIHLAQGSLSATNGDLDLAIDGNGYLEVTLPSGQSAYTRDGAL 120

Query: 107 KVTDDGSLVSASGKY-PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           K + DG +V++ G            ++    +    V      + + + I  + L     
Sbjct: 121 KRSADGLIVTSDGFSLVPEITIPADVRSISINAAGEVFAYFAETTEAQQIGEITLAGFSN 180

Query: 166 SQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
            +G     N+         P            T+++G+LEDS+ + + E+ ++I   + +
Sbjct: 181 PKGLEAAGNNLFLETEASGPSLVSTPGQDGLGTLRQGYLEDSSVDPVREVTELIEAQRGY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
                +I   ++ +    +
Sbjct: 241 ELNAKVISAADQMLGATAQ 259


>gi|238916190|ref|YP_002929707.1| flagellar basal-body rod protein FlgG [Eubacterium eligens ATCC
           27750]
 gi|238871550|gb|ACR71260.1| flagellar basal-body rod protein FlgG [Eubacterium eligens ATCC
           27750]
          Length = 277

 Score =  156 bits (394), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 47/274 (17%), Positives = 98/274 (35%), Gaps = 35/274 (12%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--------- 51
           M  S     +  ++ +  + T+A+N++N +T+G++  + +F  ++               
Sbjct: 1   MMRSLWTAASGMMSQQTSVDTIANNLANVNTIGYKQEQTQFKSLLYQNLQAKTTSANGDD 60

Query: 52  ---IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF--ALESPRGIILTRDGRF 106
                Q                G+  +T +  DFA++G+ +F     +    + TR+G F
Sbjct: 61  KPVGAQVGLGSRVSAVTSIYTQGALNATDSLTDFAIDGNGFFAVRDTNTGDTVYTRNGHF 120

Query: 107 KV--TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVG-------------EKGEISQK 151
                 +G ++S S  YPVL      I + Q     +                  E +  
Sbjct: 121 TWATATEGVMLSTSEGYPVLSADGAEIVLGQDANGEDYKTNLITIDTDGNLLYPDESNNP 180

Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPN------IPPTPLEDLSGVTVKRGFLEDSNAN 205
             +   +GLY      G  +  +S +         +     E     ++++ +LE SN  
Sbjct: 181 APIGIKIGLYQFSNPAGLDKLGSSYLGETEASGVPLNEDYDEVGKKSSLRQSYLEASNVQ 240

Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              EM  +I   + +   +  I  ++  M +A  
Sbjct: 241 VATEMVNLITAQRAYELCSKAITTSDTMMEQANN 274


>gi|121596118|ref|YP_988014.1| flagellar basal-body rod protein FlgF [Acidovorax sp. JS42]
 gi|222112273|ref|YP_002554537.1| flagellar basal-body rod protein flgf [Acidovorax ebreus TPSY]
 gi|120608198|gb|ABM43938.1| flagellar basal-body rod protein FlgF [Acidovorax sp. JS42]
 gi|221731717|gb|ACM34537.1| flagellar basal-body rod protein FlgF [Acidovorax ebreus TPSY]
          Length = 246

 Score =  156 bits (394), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 54/240 (22%), Positives = 86/240 (35%), Gaps = 5/240 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       +    A   R + +A+N++N  T GFR     F  V   ++        F  
Sbjct: 1   MDRIIYTSMTGANAAAHRQAVLANNLANASTTGFRAEMSNFRSV--PLQGGGSTTRVFAL 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119
                     G   +TG  LD    G+AWFA++        TR G F+VT  G LV+++G
Sbjct: 59  EATSGHVDTPGPAQTTGRPLDAMAVGNAWFAVQGLDGVETYTRAGSFQVTAAGQLVTSTG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS--QGFVRRENSGI 177
              + D  +     P  +              G+V   +    +        ++R + G+
Sbjct: 119 MAVLSDGGAPIDVPPNAEVTLGADGTITARLAGEVPQPVARLKLATPAADNPLKRGDDGL 178

Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                  PL       ++ G LE SN N +  M  MI   ++F     L+   E     A
Sbjct: 179 FRTAGGDPLPADPNARLRSGVLEGSNVNPVECMVGMIAAARQFEQQMRLLQTAESDDKSA 238


>gi|302874614|ref|YP_003843247.1| fagellar hook-basal body protein [Clostridium cellulovorans 743B]
 gi|307690775|ref|ZP_07633221.1| flagellar basal body rod protein FlgG [Clostridium cellulovorans
           743B]
 gi|302577471|gb|ADL51483.1| fagellar hook-basal body protein [Clostridium cellulovorans 743B]
          Length = 255

 Score =  156 bits (394), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 46/254 (18%), Positives = 98/254 (38%), Gaps = 13/254 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M + F    ++  A + +L T+++N++N +T G+R ++  FS++V    N +        
Sbjct: 1   MLSLFWNSKSSMNAQQNKLDTISNNIANVNTTGYRALQSNFSDLVYDSYNRLGTPNSGKD 60

Query: 56  -----ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVT 109
                 +         +   GS + T    +FAL+G  +F + +       TR+G FK+ 
Sbjct: 61  TELLIGTGTRLASTIRNDVQGSLLETKVSTEFALDGPGFFKITTADGTEAYTRNGSFKID 120

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM-SQG 168
            +G L    G Y  ++    P++    +   N      + +         +   +     
Sbjct: 121 SNGDLCDDKGNYLSIEFNGQPVKFNPNNFAVNPDGTITVKEGEAARTVGRIPIFNAIGND 180

Query: 169 FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228
                   +        +   +   + +G+LE+SN +   EM  MI   + F   + ++ 
Sbjct: 181 SFSSIADSLYVPKDGVQVYRENNTDILQGYLENSNVDMSKEMTDMIVTQRAFELSSKVLS 240

Query: 229 ENEKSMLEAIRNIA 242
             ++ M   + NI 
Sbjct: 241 TGDQ-MWGIVNNIR 253


>gi|78485810|ref|YP_391735.1| hypothetical protein Tcr_1469 [Thiomicrospira crunogena XCL-2]
 gi|78364096|gb|ABB42061.1| Flagellar basal-body rod protein FlgG [Thiomicrospira crunogena
           XCL-2]
          Length = 263

 Score =  156 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 48/263 (18%), Positives = 99/263 (37%), Gaps = 22/263 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  +      A + RL+T+++N++N +T  ++T + +F++++               
Sbjct: 1   MNRALYVAKTGLEAQDFRLATISNNLANANTYAYKTGRAEFNDLMYQNVRQPGAQATQNE 60

Query: 54  --------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDG 104
                   Q  + V +         G+ + T  +LD  +EG  +F   +    I+ TRDG
Sbjct: 61  ENTFPSGLQLGTGVKAIGVQKIHTQGNAMVTDNQLDVMIEGKGFFQALDQDGNIMYTRDG 120

Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSV 163
            F+V  +G LV++SG     ++                V  K   + +   +  + L + 
Sbjct: 121 SFEVNQNGDLVTSSGYLVEPNINIPLNTTEVFISSDGVVSAKEPGNPQPIAVGQLELATF 180

Query: 164 DMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
               G      +     +          E     ++ +G LE SN N++ E+  MI   +
Sbjct: 181 INPAGLEATGKNFYIETLASGAPNVKNPEIEEAGSLLQGALESSNVNTVEELIGMIEAQR 240

Query: 219 KFNSITTLIDENEKSMLEAIRNI 241
            +   +  I   +  M     N+
Sbjct: 241 TYEMNSKAISAADGMMQYLNNNV 263


>gi|254500847|ref|ZP_05112998.1| flagellar basal-body rod protein FlgG [Labrenzia alexandrii DFL-11]
 gi|222436918|gb|EEE43597.1| flagellar basal-body rod protein FlgG [Labrenzia alexandrii DFL-11]
          Length = 260

 Score =  156 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 37/258 (14%), Positives = 89/258 (34%), Gaps = 20/258 (7%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             +         A E  +  +++N++N  T G++  +  F +++      +         
Sbjct: 1   MRALYTAATGMKAQEYNVEVISNNVANMRTTGYKKQRADFQDLLYQNLRRMGTETSDDGT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP-RGIILTRDGRF 106
                 Q  + V           GS  +TG ELD A+ G+ +F ++ P      +RDG F
Sbjct: 61  IVPTGIQIGTGVKLASTGRVMSQGSMENTGKELDIAIRGEGFFQIQLPGGATGYSRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           +   +G LV+  G     ++                 +  + +     +  + L      
Sbjct: 121 ERDQNGQLVTIDGYQLDPNITIPENTRDLTIAPSGKVQGVDEAGATVDLGQIQLARFVNK 180

Query: 167 QGFVRRENSGISPNIPPTPLEDLS-----GVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221
            G     ++           +  +       + ++ FLE +N +++ E+  +I   + + 
Sbjct: 181 AGLEAIGDNLFLETDASGAPQTGNPNEDGYGSTQQFFLEMANVDAVTEIADLISAQRAYE 240

Query: 222 SITTLIDENEKSMLEAIR 239
             + +I   ++      +
Sbjct: 241 MNSKVIQAADQMYSTTTQ 258


>gi|330830301|ref|YP_004393253.1| flagellar basal body rod protein FlgG [Aeromonas veronii B565]
 gi|328805437|gb|AEB50636.1| Flagellar basal body rod protein FlgG [Aeromonas veronii B565]
          Length = 262

 Score =  156 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 44/261 (16%), Positives = 95/261 (36%), Gaps = 21/261 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +  I      A +  +S  ++N++N  TVGF+  +  F +++    N    +     
Sbjct: 1   MNPALWISKTGLDAQQTNISVTSNNLANASTVGFKKSRAIFEDLLYQNINQPGGRSSADT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                    +         +   G+  +T   LD  + G  +F ++ P G    TR+G+F
Sbjct: 61  ELPSGLMLGAGAKVVATQKNHSQGNVQTTDNSLDLMISGRGYFEIQLPDGSAAYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG--KVIATMGLYSVD 164
            + D+G++V+    YP+     +P          +     ++   G  +V+  + +    
Sbjct: 121 TLNDEGTIVTPGNGYPLQPEIQIPENAQSVTVGEDGQVSVQLKGDGASQVVGQINISDFV 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQK 219
            + G      +              +        +K+G LE SN N   E+  +I   + 
Sbjct: 181 NASGLQPMGENMFVETQSSGAAAQGTAGADGLGVIKQGMLETSNVNVTEELVNLIQAQRV 240

Query: 220 FNSITTLIDENEKSMLEAIRN 240
           +   + ++   +  M   I+ 
Sbjct: 241 YEMNSKVLSAVDGMMSFLIQR 261


>gi|71282391|ref|YP_268224.1| flagellar basal body rod protein FlgG [Colwellia psychrerythraea
           34H]
 gi|71148131|gb|AAZ28604.1| flagellar basal-body rod protein FlgG [Colwellia psychrerythraea
           34H]
          Length = 262

 Score =  156 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 96/262 (36%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +  I      A  + ++ +++N++N  T+GF+  +  F +++    N    +     
Sbjct: 1   MNAALWISKTGLDAQTKDIAVISNNLANASTIGFKKSRAVFEDLLYQNINQPGGRTAQDT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    +             G  I++   LD  ++G+ +F ++ P      +R+G+F
Sbjct: 61  EAPSGLMLGAGTKVVATQKIHTQGDMITSDNALDLMIQGEGFFEIQMPDGSSAYSRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG--EISQKGKVIATMGLYSVD 164
            + D+G++V+    Y +    ++P          +       +      V+  + L +  
Sbjct: 121 TMDDEGNMVTPGAGYMIQPQVTIPEDALSIIVSQDGEVSVTLQGQPDPAVVGQINLINFV 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +  +        ++          + +G LE SN N+  E+  +I   + 
Sbjct: 181 NPTGLQPIGQNLYTETAVSGAPQEGVPGLEGYGMLVQGALETSNVNTTEELVNLIESQRV 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   ++ +    + +
Sbjct: 241 YEMNSKVISAVDEMLSYINQQM 262


>gi|83858806|ref|ZP_00952328.1| flagellar basal-body rod protein FlgG [Oceanicaulis alexandrii
           HTCC2633]
 gi|83853629|gb|EAP91481.1| flagellar basal-body rod protein FlgG [Oceanicaulis alexandrii
           HTCC2633]
          Length = 261

 Score =  156 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 37/259 (14%), Positives = 95/259 (36%), Gaps = 21/259 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             + +       A    +  ++ N++N +T+ F+  + +F +++    +           
Sbjct: 1   MRALSTAATGMEAQSLAVEVISHNLANMNTIAFKRQRAEFEDLLYQTISQPGANSSNAGT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q    V +G  Y   E G    T    D A+ G  +F ++ P      TR G F
Sbjct: 61  IVPTGVQVGLGVNAGSVYRITEQGGMSETNNPYDVAISGQGYFRVQLPDGNDAYTRAGNF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASV-PIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
            ++ +G +V+A G   +  +      +    +    V    +   + +V+    L +   
Sbjct: 121 SLSPNGEIVTADGYAVMPGIVIPAEARQVVINNQGQVQVLLDGQPQPQVVGQFELATFPN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G  +  ++ +  +         +       ++++ F+E SN +++ E+  +I   + +
Sbjct: 181 EAGLEQIGDNLLLESAASGAPNLGAPTDPGFGSLRQRFVEVSNVDAVTEITSLIQAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
                +I   ++ +  +  
Sbjct: 241 EMNARVITAADEMLATSSN 259


>gi|163738060|ref|ZP_02145476.1| flagellar basal-body rod protein FlgG [Phaeobacter gallaeciensis
           BS107]
 gi|163742544|ref|ZP_02149930.1| flagellar basal-body rod protein FlgG [Phaeobacter gallaeciensis
           2.10]
 gi|161384129|gb|EDQ08512.1| flagellar basal-body rod protein FlgG [Phaeobacter gallaeciensis
           2.10]
 gi|161388676|gb|EDQ13029.1| flagellar basal-body rod protein FlgG [Phaeobacter gallaeciensis
           BS107]
          Length = 261

 Score =  156 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 101/259 (38%), Gaps = 21/259 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             +  I      A + R+ T+++N++N +T G+   + +F+++                 
Sbjct: 1   MRALKIAATGMTAQQLRVETISNNLANMNTTGYNARRAEFADLHYQQVTRAGTVNASDGT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q    V +    +    G+   TG +LD A++G  +  +  P G    TRDG  
Sbjct: 61  VLPTGVQVGLGVRASAISIHLAQGALSQTGNDLDVAIDGKGYLEVTLPSGQSAYTRDGAL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           K + +G +V++ G     D+      +    +    V    + + +G+++  + L     
Sbjct: 121 KRSAEGLVVTSDGFTVSPDITIPSDARNVSINADGEVYAYFDETAEGQLMGQLTLAGFAN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
            +G     ++              S       T+++G+LE S+ +++ E+ ++I   + +
Sbjct: 181 PKGLEALGSNLFVETEASGAATVASPGENGLGTLRQGYLEASSVDAVREVTELIEAQRGY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
                +I   ++ M    +
Sbjct: 241 EMNAKVISAVDQMMGATTQ 259


>gi|254463756|ref|ZP_05077167.1| flagellar basal-body rod protein FlgG [Rhodobacterales bacterium
           Y4I]
 gi|206684664|gb|EDZ45146.1| flagellar basal-body rod protein FlgG [Rhodobacterales bacterium
           Y4I]
          Length = 261

 Score =  156 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 41/259 (15%), Positives = 99/259 (38%), Gaps = 21/259 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             +  I      A + R+ T+++N++N +T  +   + +F+++     +           
Sbjct: 1   MRALKIAATGMSAQQLRVETISNNLANMNTTAYNARRAEFADLHYQQISRAGTVNASDGT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q    V      +    G+   T  +LD A++G+ +  +  P G    TRDG  
Sbjct: 61  VLPTGVQVGLGVRPAAVSVHLSQGALQQTNNDLDVAIDGNGYLEVTLPSGQSAYTRDGAL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           K + +G +V++ G     ++                V    + S +G+++    L S   
Sbjct: 121 KRSAEGLIVTSDGFAVSPEITIPDDATSISINAEGEVYGYFQDSPEGQLLGQFTLASFTN 180

Query: 166 SQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
            +G     ++  +              +    T+++G+LE S+ +++ E+ ++I   + +
Sbjct: 181 PKGLEAIGSNLFTETEASGAATVTTAGEDGLGTLRQGYLEGSSVDAVREVTELIEAQRGY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
                +I   ++ M    +
Sbjct: 241 EMNAKVISAVDQMMGATTQ 259


>gi|296534160|ref|ZP_06896654.1| flagellar basal-body rod protein FlgG [Roseomonas cervicalis ATCC
           49957]
 gi|296265515|gb|EFH11646.1| flagellar basal-body rod protein FlgG [Roseomonas cervicalis ATCC
           49957]
          Length = 262

 Score =  156 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 41/257 (15%), Positives = 91/257 (35%), Gaps = 21/257 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             S NI     +A +  +  +++N++N  T  ++  + +F +++                
Sbjct: 1   MRSLNIAGTGMMAQQTNVEVISNNIANMSTTAYKRRRAEFQDLLYENLRRTGSQSSDQGT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q    V +   Y     G    T    D A+ G+ +F ++ P      TR G F
Sbjct: 61  VLPSGAQLGLGVRTAAIYRIGAQGDLSQTQNSFDLAIRGNGYFPVQMPTGETAYTRAGSF 120

Query: 107 KVTDDGSLVSASGKYP-VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
            ++D G +V+A G       +     +    +    V  K +     + +  + L +   
Sbjct: 121 GLSDAGMIVTADGFQVGAGIVIPAGARDVTINATGEVLVKIDGQAALQNVGQLQLGTFPN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLS-----GVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++          +   +        V +G+LE SN N + E+  +I   + +
Sbjct: 181 EGGLEAIGDNMFLETPASGGVTLGNPGAAGYGQVLQGYLETSNVNVVQEITALITAQRAY 240

Query: 221 NSITTLIDENEKSMLEA 237
              + +I  +++ +   
Sbjct: 241 EMNSKVITASDEMLSTL 257


>gi|27380939|ref|NP_772468.1| flagellar basal body rod protein FlgG [Bradyrhizobium japonicum
           USDA 110]
 gi|27354105|dbj|BAC51093.1| flagellar basal-body rod protein [Bradyrhizobium japonicum USDA
           110]
          Length = 262

 Score =  156 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 46/258 (17%), Positives = 88/258 (34%), Gaps = 21/258 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55
             + +       A E  +  +++N++N  T GF+     F +++      +  +      
Sbjct: 1   MQALHTAATGMAAQELNVQVISNNIANLRTTGFKKQTAAFQDLIYEHVRRVGAQASDQGT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                      V +     S   G+   TG +LD A+ G+ +F +  P G    TRDG F
Sbjct: 61  IVPVGVDIGGGVKTVGTPRSMTQGTLSQTGNDLDLAISGEGFFKILMPDGTFQYTRDGTF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165
           ++ + G +V+A G      +                       S    V   +GL     
Sbjct: 121 QMDNQGRVVTAQGNPVQPTITIPNNASGLTVNEQGQVSVTLPGSSTSAVQGQLGLTRFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     N+  +      P +D          + +G LE +N + + EM  +I   + +
Sbjct: 181 KAGLQPVGNNQFTETPSSGPPQDGTANTEGYGKITQGSLEQANVDVVSEMSDLIAAQRAY 240

Query: 221 NSITTLIDENEKSMLEAI 238
                +I   ++ M    
Sbjct: 241 EMNAKVISAADQMMQSTT 258


>gi|320107042|ref|YP_004182632.1| flagellar basal-body rod protein FlgG [Terriglobus saanensis
           SP1PR4]
 gi|319925563|gb|ADV82638.1| flagellar basal-body rod protein FlgG [Terriglobus saanensis
           SP1PR4]
          Length = 262

 Score =  156 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 51/257 (19%), Positives = 95/257 (36%), Gaps = 20/257 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG------------AI 48
           M  +     +   A +  L T+A+N++N+ T GFR  +++F ++V               
Sbjct: 1   MIRALYTAASGMSAQQANLDTIANNLANSATSGFRRRRLQFEDMVYQNLVTPGSAETTQT 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFK 107
            +   Q      S    +    G F  TG + D A++G  +F +  P G    TR G F 
Sbjct: 61  TSAGLQIGLGTKSVASEVIMTQGDFNQTGNQYDLAIQGQGFFQVIRPDGTLAYTRAGSFP 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQKGKVIATMGLYSVDMS 166
               G L + +G      ++            + V       S  G  + T+ L +    
Sbjct: 121 PNGQGQLATVNGDLLTPAISIPANATSVTISAYGVVTAAVPGSTTGTQLGTIQLATFPNP 180

Query: 167 QGFVRRENSGISPN------IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
            G      +   P       I   P  +    T+++ +LE+SN + + E  QM+   + +
Sbjct: 181 GGLNSLGGNLFQPTLASGNAITDLPGGNSGMGTLQQTYLENSNVDVVEEFVQMVMAQRAY 240

Query: 221 NSITTLIDENEKSMLEA 237
            S + +I   +    + 
Sbjct: 241 ESNSKVIHVADDMYSQI 257


>gi|297531535|ref|YP_003672810.1| fagellar hook-basal body protein [Geobacillus sp. C56-T3]
 gi|297254787|gb|ADI28233.1| fagellar hook-basal body protein [Geobacillus sp. C56-T3]
          Length = 276

 Score =  156 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 58/276 (21%), Positives = 107/276 (38%), Gaps = 37/276 (13%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51
           M        +  LA E+R+  + +N++N +T G++        F E++ +   D      
Sbjct: 1   MLRGLYTAASGMLAQERRVDWLTNNLANAETPGYKADAAAMRAFPELLMSRLEDQPIPTA 60

Query: 52  ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFAL-------------EGDA 88
                     I   ++ V   +   +   G    TG   D AL              G  
Sbjct: 61  SRRAIPTQTVIGPLVTGVYMQELIPNFRQGDVKETGLATDIALVDGQVPVDRASRQRGAL 120

Query: 89  WFALESPRGI-ILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGE 147
           +FA+ + +G    TR+G F ++ DG L +  G Y +    +   +IP   E F+V + G 
Sbjct: 121 FFAVANGQGEVRYTRNGHFTLSPDGYLTTQEGWYVL---DANGERIPLSSERFSVRDDGT 177

Query: 148 ISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-TVKRGFLEDSNANS 206
           I  +      +G+      Q  V+  N        P P    +   TVK+ FLE SN + 
Sbjct: 178 IIDENGTATRLGVAFAANPQTLVKEGNGLFRSTTGPLPQAPGNVTYTVKQRFLERSNVDI 237

Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
              M  ++   + F +   ++   ++S+ +A+  + 
Sbjct: 238 ERTMTDLLAAYRTFEANQKIVQAYDRSLDKAVNEVG 273


>gi|115523168|ref|YP_780079.1| flagellar basal body rod protein FlgF [Rhodopseudomonas palustris
           BisA53]
 gi|115517115|gb|ABJ05099.1| flagellar basal body rod protein [Rhodopseudomonas palustris
           BisA53]
          Length = 243

 Score =  156 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 80/242 (33%), Positives = 130/242 (53%), Gaps = 4/242 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           MQ++  + L+AQ++LE+RL T+A+NM+N  T  FR   VKF   +    N   + ++F  
Sbjct: 1   MQSALYVSLSAQVSLEKRLETIANNMANMKTAAFRADAVKFETAMS---NAASKPVAFST 57

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
            G  ++S++ GS   TG  LD A+ G+AW     P G + TRDGR ++  +G L + +G 
Sbjct: 58  PGDNFISRKAGSVTQTGNNLDVAVVGNAWIGFTGPNGAVYTRDGRMQINANGELQTVTGY 117

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
            PVLD    PI +        +   G ISQ    +  +GL+ +       R  NSG+ P+
Sbjct: 118 -PVLDAGGTPILVDPDAGPLIIARNGIISQGTNQVGVLGLFDIPADAKLERFGNSGVVPD 176

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
              T + D  G   ++GF+E SN + + E+ QM+   + F  +++LI+ +E +M  AIR 
Sbjct: 177 RAATAVVDFVGAGFQQGFVEGSNVDPLLELTQMMTAQRAFQGVSSLIEGSEGTMQNAIRT 236

Query: 241 IA 242
           + 
Sbjct: 237 LG 238


>gi|261420741|ref|YP_003254423.1| fagellar hook-basal body protein [Geobacillus sp. Y412MC61]
 gi|319768411|ref|YP_004133912.1| flagellar hook-basal body protein [Geobacillus sp. Y412MC52]
 gi|261377198|gb|ACX79941.1| fagellar hook-basal body protein [Geobacillus sp. Y412MC61]
 gi|317113277|gb|ADU95769.1| flagellar hook-basal body protein [Geobacillus sp. Y412MC52]
          Length = 276

 Score =  155 bits (392), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 58/276 (21%), Positives = 107/276 (38%), Gaps = 37/276 (13%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51
           M        +  LA E+R+  + +N++N +T G++        F E++ +   D      
Sbjct: 1   MLRGLYTAASGMLAQERRVDWLTNNLANAETPGYKADAAAMRAFPELLMSRLEDQPIPTA 60

Query: 52  ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFAL-------------EGDA 88
                     I   ++ V   +   +   G    TG   D AL              G  
Sbjct: 61  SRRAIPTQTVIGPLVTGVYMQELIPNFRQGDVKETGLATDIALVDGQVPVDRASGQRGAL 120

Query: 89  WFALESPRGI-ILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGE 147
           +FA+ + +G    TR+G F ++ DG L +  G Y +    +   +IP   E F+V + G 
Sbjct: 121 FFAVANGQGEVRYTRNGHFTLSPDGYLTTQEGWYVL---DANGERIPLSSERFSVRDDGT 177

Query: 148 ISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-TVKRGFLEDSNANS 206
           I  +      +G+      Q  V+  N        P P    +   TVK+ FLE SN + 
Sbjct: 178 IIDENGTATRLGVAFAANPQTLVKEGNGLFRSTTGPLPQAPGNVTYTVKQRFLERSNVDI 237

Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
              M  ++   + F +   ++   ++S+ +A+  + 
Sbjct: 238 ERTMTDLLAAYRTFEANQKIVQAYDRSLDKAVNEVG 273


>gi|260893854|ref|YP_003239951.1| fagellar hook-basal body protein [Ammonifex degensii KC4]
 gi|260865995|gb|ACX53101.1| fagellar hook-basal body protein [Ammonifex degensii KC4]
          Length = 260

 Score =  155 bits (392), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 47/259 (18%), Positives = 97/259 (37%), Gaps = 23/259 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIK---VKFSEVV-----GAIKNDI 52
           M     I  +     +  L   A+N++N  T GF+  +     F+EV+           I
Sbjct: 1   MIRGIYIAASGLNLQQALLDVTANNLANLSTPGFKQDRLTATTFAEVLLYRLEREGITAI 60

Query: 53  DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDG 112
                     + Y     G+ + TG   D AL G+ +   ++P+GI   R G   V  +G
Sbjct: 61  GTTNYGTLPERSYTDFTQGALVETGNYRDVALVGEGFLVADTPQGIRYFRSGTLFVDREG 120

Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ----- 167
            L +A+G   + +       I   +E F +   G +   G+ +  + +  +   Q     
Sbjct: 121 YLTTATGDRVLGEGRRP---IQVGEESFTILPDGTVEVAGRTVGRLLVVRIINPQQREGE 177

Query: 168 ------GFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221
                 G + +E       +  +    +    V++G+LE +N +   EM ++    + + 
Sbjct: 178 LPIWDSGILAKEGRNYYRLVGGSEAPAVG-TLVRQGWLEAANVDLAGEMARLCTCLRAYQ 236

Query: 222 SITTLIDENEKSMLEAIRN 240
             +  +  +++ +   I  
Sbjct: 237 LASRALKTHDELLNRIINQ 255


>gi|167645397|ref|YP_001683060.1| flagellar basal body rod protein [Caulobacter sp. K31]
 gi|167347827|gb|ABZ70562.1| flagellar basal body rod protein [Caulobacter sp. K31]
          Length = 245

 Score =  155 bits (392), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 53/244 (21%), Positives = 106/244 (43%), Gaps = 4/244 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN--DIDQKISF 58
           M  +  +GL+ Q+ L + L  VA+N++N +T GF+  ++                  + F
Sbjct: 1   MDNALYVGLSRQMTLRRELDIVANNIANANTTGFKVEQLMVRTEPAKPARTVGGSYPVKF 60

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSAS 118
           V           G+   TG   D A+EG  +F + +  G   TRDGRF ++ +G L++ +
Sbjct: 61  VLDDGVARDFSQGALTQTGGAFDLAIEGQGFFKVSTAGGERYTRDGRFTMSPEGKLITQN 120

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178
           G    LD     I +        +   G +SQ  + +  +G+        F +  ++   
Sbjct: 121 GASV-LDEGGGEIIVDPLKGPATIARDGTVSQGAERLGKIGVVRPTDLAAFRKDGDNLYR 179

Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
                TP +  +   + +G LE SN  S+ ++ ++I + + + S+  ++D+  +    A+
Sbjct: 180 NTTNDTP-QPATNAAIHQGMLEASNVESIKQITKLIEVNRAYESVAKMMDQTTELSRSAV 238

Query: 239 RNIA 242
             + 
Sbjct: 239 ERMG 242


>gi|117926380|ref|YP_866997.1| flagellar basal body rod protein [Magnetococcus sp. MC-1]
 gi|117610136|gb|ABK45591.1| flagellar basal body rod protein [Magnetococcus sp. MC-1]
          Length = 269

 Score =  155 bits (392), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 58/269 (21%), Positives = 107/269 (39%), Gaps = 31/269 (11%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS--- 57
           M +     +      E RLST+A+N++N +T G++  ++ F   + +   ++    +   
Sbjct: 1   MDSGVYAAVNGARRTELRLSTLANNLANVNTTGYKEDRLTFESFMTSPGPELHPLPTDDF 60

Query: 58  ------------------------FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE 93
                                   +  + +  +  + G+   T   L  A+EG+ +F L 
Sbjct: 61  MGMRGPGDIPFPFSNPSSNAYRMTYPVAFETEVDVQQGALHGTNNPLHVAIEGEGFFVLN 120

Query: 94  SPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK 153
            P G   TRDG F+V + G LVS  G   +         I   D   N+   G ++  G+
Sbjct: 121 GPDGRRYTRDGSFEVNNVGELVSKDGYQVLGPGGEP---IVVGDGPVNIAPDGFVTSNGE 177

Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQM 213
            + T+    +   Q     +N   +P     P++  +   V +GFLE SN+N +  M QM
Sbjct: 178 EVGTIARVKLPSEQLDKVGQNQYKAPQDLEVPVD-AAQAQVHQGFLEGSNSNPIRAMTQM 236

Query: 214 IHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           I   + +     +I   +    +A+  I 
Sbjct: 237 IEAQRAYEMHIKMIQNLDNLDDQAVNRIG 265


>gi|315497881|ref|YP_004086685.1| flagellar basal-body rod protein flgg [Asticcacaulis excentricus CB
           48]
 gi|315415893|gb|ADU12534.1| flagellar basal-body rod protein FlgG [Asticcacaulis excentricus CB
           48]
          Length = 262

 Score =  155 bits (392), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 86/254 (33%), Gaps = 21/254 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             +         A +  + T++ N++N +TVGF+  + +F +++      +         
Sbjct: 1   MRALRTATTGMSAQQLNVDTISHNIANMNTVGFKKQRAEFQDLLYQNVERMGAQSSESGT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q    V +G  Y     GS   T    D  ++G  +F +  P      TR G F
Sbjct: 61  VVPTGIQVGGGVKTGSVYRILTQGSATRTDNPYDIMVDGRGYFQVLMPSGETAYTRAGNF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
            V D G LV+  G      +                V    +      VI  + + S   
Sbjct: 121 AVNDQGQLVTDDGYLVQPQITFPQDTKEVTISKTGQVSVTQDGVTAPTVIGQLQVASFFN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++    +                 T+ +G+ E SN +++ E+  +I   + +
Sbjct: 181 EAGLEAIGDNLYLQSGASGAPNIGTPGDVGYGTLMQGYTEASNVDAVSEITSLIVAQRAY 240

Query: 221 NSITTLIDENEKSM 234
              + +I   ++ +
Sbjct: 241 EMNSKIIKTADEML 254


>gi|295697724|ref|YP_003590962.1| fagellar hook-basal body protein [Bacillus tusciae DSM 2912]
 gi|295413326|gb|ADG07818.1| fagellar hook-basal body protein [Bacillus tusciae DSM 2912]
          Length = 273

 Score =  155 bits (392), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 44/269 (16%), Positives = 82/269 (30%), Gaps = 27/269 (10%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKN------- 50
           M     I  +  +A ++R   VA+N+ N  T G++  +     F ++             
Sbjct: 1   MIRGLYIAASGMIAQQRREEIVANNLVNASTPGYKQDEPSLRTFGDLFLRRLGSPASGTA 60

Query: 51  -----DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA------------WFALE 93
                 +                  G  + T    DFAL                +    
Sbjct: 61  LPLAPGVGPLNLGATMEDAPPRFTPGPLVETKRNQDFALIDPPGRQSRPGGVEAFFAVEG 120

Query: 94  SPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK 153
               I+LTRDG+F    +G L +  G   +    +  +       +   G        G 
Sbjct: 121 PNGQILLTRDGQFIEGPNGQLYTGDGYRVLAAGPNGQVIPGSSVALDASGAVHTYDGTGA 180

Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQM 213
            +               ++                 S   V++GFLE SN +    M QM
Sbjct: 181 EVFGGLAVLDAPVAALQKQGTGVYVLTPGAAGGLVPSLAQVRQGFLEQSNVDPGQTMVQM 240

Query: 214 IHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           I + + + +   +I   ++SM + +  + 
Sbjct: 241 IDVVRAYEANQKVIRTVDQSMDKLVNQVG 269


>gi|288962678|ref|YP_003452972.1| flagellar basal-body rod protein [Azospirillum sp. B510]
 gi|288914944|dbj|BAI76428.1| flagellar basal-body rod protein [Azospirillum sp. B510]
          Length = 261

 Score =  155 bits (392), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 39/259 (15%), Positives = 94/259 (36%), Gaps = 21/259 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55
               +I     +A +  +  +++N++N +T  ++  + +F +++   +     +      
Sbjct: 1   MRVLSIASTGMMAQQLNVEVISNNIANINTTAYKRSRAEFQDLMYQAEKRQGSQSTDSGT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP-RGIILTRDGRF 106
                      V           G+  STG ELD A+EG  +F +  P    + TR G F
Sbjct: 61  IVPTGVEVGLGVRPTSVNRINTTGNLTSTGNELDLAIEGRGYFNVTQPGGETVYTRAGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVP-IQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           K++ +G++V+A G      +      +    +    V    +   +      + +     
Sbjct: 121 KLSPEGTIVTADGFTVAPGITVPQGTREVVINRSGEVLAYVDGKTQPVNQGQLAMTVFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++           ++         T+++ +LE SN N + E+ ++I   + +
Sbjct: 181 ESGLEALGDNLFRATPASGEPQEGLAGQAGFGTIRQKYLESSNVNVVQEITELISAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
                +I+  ++       
Sbjct: 241 EMNAKVIEAGDQMASTMTN 259


>gi|90423017|ref|YP_531387.1| flagellar basal body rod protein FlgG [Rhodopseudomonas palustris
           BisB18]
 gi|90105031|gb|ABD87068.1| Flagellar basal-body rod FlgG [Rhodopseudomonas palustris BisB18]
          Length = 262

 Score =  155 bits (392), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 39/259 (15%), Positives = 88/259 (33%), Gaps = 21/259 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55
             +         A E  +  +++N++N  T GF+  +  F +++      +  +      
Sbjct: 1   MRALYTAATGMAAQELNVQVISNNIANMRTTGFKKQRAAFQDLIYDHVRRVGAQASDQGT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                      V +         G+  +TG +LD A+ G+ +F ++ P G    TRDG F
Sbjct: 61  ILPVGVDIGGGVKTVGTPRLMTQGTLSTTGNDLDLAVRGEGFFKIQMPDGTYSYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
              + G +V+++G      +                V      S    V+  + L     
Sbjct: 121 TTDNTGRVVTSNGNPLQPTITIPTGASGITIASNGQVSVTVTGSTTPTVLGQISLTRFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   + ++         P +D          +++  LE +N   + E+  +I   + +
Sbjct: 181 KTGLQPQGDNLFIETGASGPPQDGIANADGYGDIQQQTLEQANVEVVTEISDLIAAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
                ++   ++ +     
Sbjct: 241 EMNAKVVSAADQMLQSTSN 259


>gi|238927618|ref|ZP_04659378.1| possible flagellar basal-body rod protein [Selenomonas flueggei
           ATCC 43531]
 gi|238884543|gb|EEQ48181.1| possible flagellar basal-body rod protein [Selenomonas flueggei
           ATCC 43531]
          Length = 266

 Score =  155 bits (392), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 52/266 (19%), Positives = 105/266 (39%), Gaps = 27/266 (10%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51
           M     I  +  +   +    +A+N++N  T GF+   +   +F  ++    ND      
Sbjct: 1   MWRGLYIAASGMITETKHTDMIANNLANAATTGFKRDDMAIREFEPMLLRRINDHSADTD 60

Query: 52  ---------------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR 96
                          +       A  +       G+  +TG   DF + G  +F +++P+
Sbjct: 61  VTSFKGFRLRSGAPIVGTLGLGSAVDEIATDHLQGALQATGNTYDFGISGQGYFVVDTPQ 120

Query: 97  GIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156
           G   TRDG F  +  G L +  G+   L     PI IP       V   G I   G+ IA
Sbjct: 121 GPRYTRDGSFYRSSTGQLQTVRGQAV-LSAQGQPITIPATAHHVTVSSDGRIYSDGRQIA 179

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
            +G    D  +  +++ ++   P          +   +++G LE SN + + EM ++I+ 
Sbjct: 180 QLGFVQFDEPKAVIKQGDNLYRPQQGA--QPQQATGVIEQGMLEMSNTSVVTEMVELINN 237

Query: 217 TQKFNSITTLIDENEKSMLEAIRNIA 242
            + + + +  +   +  + +A+ ++ 
Sbjct: 238 YRVYEAGSKAVQTQDTLLDKAVNDVG 263


>gi|254511992|ref|ZP_05124059.1| flagellar basal-body rod protein FlgG [Rhodobacteraceae bacterium
           KLH11]
 gi|221535703|gb|EEE38691.1| flagellar basal-body rod protein FlgG [Rhodobacteraceae bacterium
           KLH11]
          Length = 261

 Score =  155 bits (392), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 104/259 (40%), Gaps = 21/259 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             +  I      A + R+ T+++N++N +T G+ T + +F+++                 
Sbjct: 1   MRALKIAATGMTAQQMRVETISNNLANMNTTGYNTRRAEFADLHYQQVARAGAVSASDGT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q    V      +  E G   +TG++LD A+EG  +  +  P G    TRDG  
Sbjct: 61  VLPTGIQLGLGVRPAAVTVQLEQGGLSATGSDLDVAIEGRGYLEVTLPNGQSAYTRDGSL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           K + +G +V++ G     ++      +    +    V    + + +G+++    + S   
Sbjct: 121 KRSAEGLIVTSDGFAVAPEITIPDDARSISINAAGEVYAYFDDTAEGQLLGEFTMASFSN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
           ++G     ++                      T+++G+LEDS+ +++ E+ ++I   + +
Sbjct: 181 AKGLEAVGSNLFKETEASGAPVVGRPGEDGLGTLRQGYLEDSSVDAVREVTELIEAQRGY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
                +I   ++ M    +
Sbjct: 241 EMNAKVISAVDQMMGATTQ 259


>gi|83816512|ref|YP_446741.1| flagellar basal-body rod protein FlgG [Salinibacter ruber DSM
           13855]
 gi|294508677|ref|YP_003572736.1| flagellar basal-body rod protein FlgG [Salinibacter ruber M8]
 gi|83757906|gb|ABC46019.1| flagellar basal-body rod protein FlgG [Salinibacter ruber DSM
           13855]
 gi|294345006|emb|CBH25784.1| flagellar basal-body rod protein FlgG [Salinibacter ruber M8]
          Length = 262

 Score =  155 bits (392), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 49/256 (19%), Positives = 98/256 (38%), Gaps = 19/256 (7%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID--------- 53
            S         A +  +  +A+N+SN +T G++  +V F +++                 
Sbjct: 4   RSLQTAALGMQAQQTSIDNIANNLSNANTTGYKRSRVVFQDLLYENVQASAEGQTDGAEP 63

Query: 54  ---QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVT 109
              Q  S   +     +   GSF  TG  LD A+ GD +F ++ P   +  TRDG F ++
Sbjct: 64  AELQIGSGTTAVATVRNFSQGSFSKTGNSLDLAINGDGFFQVQQPDGSLAYTRDGTFTLS 123

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDMSQG 168
            +G++V+ +G     ++   P  +    +    V  + +   +   +  M L     S G
Sbjct: 124 SEGNIVTQTGLKVQPNINVPPNAVEISIDQEGTVKARLQGESEMVELGQMELARFPNSAG 183

Query: 169 FVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223
              +  +              +        V++GFLE  N   + EM  +I   + +   
Sbjct: 184 LRPQGGNLYEQTESSGEPFIGTPGRGGLGNVRQGFLEKGNVKVVQEMTSLIQAQRTYELN 243

Query: 224 TTLIDENEKSMLEAIR 239
           + ++  +++ M  A  
Sbjct: 244 SRMVTTSDEMMQTANN 259


>gi|327478811|gb|AEA82121.1| flagellar basal-body rod protein FlgG [Pseudomonas stutzeri DSM
           4166]
          Length = 261

 Score =  155 bits (392), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 47/260 (18%), Positives = 95/260 (36%), Gaps = 21/260 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M ++  +      A ++ ++TVA+N++N +T GF++ +  F ++   I+           
Sbjct: 1   MNSALWVSKTGLAAQDKAMATVANNLANVNTNGFKSDRAVFEDLFYVIEKQPGAQADEIN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  S V           GS  +TG  +D A+ G  +F +E+P   I  T +G+F
Sbjct: 61  TVPSGIQLGSGVRVAGTQKVFTEGSIQTTGQPMDLAIVGRGFFQVEAPNGDIFYTENGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQI-PQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           ++  +G +V+A G      +                V            +  + L +   
Sbjct: 121 QLNAEGMMVNAQGLPLNPAIEVPEGSTGFTVGSDGIVTAVLAGDTLPSELGQITLVNFTN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +     +      +          +K+G LE SN   +  M  MI + + +
Sbjct: 181 PGGLEALGGNLYRETVASGEPVEGVPGEEGLGQLKQGVLEGSNVQVVEAMVAMIAIQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRN 240
            +   ++D     M + +  
Sbjct: 241 EANAKVLDAASG-MQQFLNQ 259


>gi|209695760|ref|YP_002263690.1| flagellar basal body rod protein FlgG [Aliivibrio salmonicida
           LFI1238]
 gi|208009713|emb|CAQ80017.1| flagellar basal-body rod protein FlgG (distal rod protein)
           [Aliivibrio salmonicida LFI1238]
          Length = 262

 Score =  155 bits (392), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 44/262 (16%), Positives = 93/262 (35%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +  +      A +  ++T+++N++N  TVGF+  +  F ++     N    +     
Sbjct: 1   MNPALWVSKTGLDAQQTNIATISNNLANASTVGFKKSRAVFEDLFYQNVNQAGAQSTQNT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                    S             G+  +T   +D  +EG  +F +  P G +  +R+G+F
Sbjct: 61  ELPTGLMLGSGSKVVATQKVFTNGNAQTTSNGMDMMIEGKGFFQITMPDGNLGYSRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG--EISQKGKVIATMGLYSVD 164
            +  +G++V+    YP+     VP          +          Q  +VI  +      
Sbjct: 121 TLNSEGAMVTTGSGYPLEPEIVVPEDAINVTVGTDGEVSVRLRGQQDNQVIGQITTVDFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +   P       ++ +        +++  LE SN N   E+  MI   + 
Sbjct: 181 NPGGLEPVGQNLYLPTGASGDPQEGTPGLEGLGAIRQSMLEASNVNVTEELVNMIEAQRV 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +   + +I   +K      + +
Sbjct: 241 YEMNSKVISAVDKMASFVNQQL 262


>gi|306846298|ref|ZP_07478859.1| flagellar basal body rod protein FlgF [Brucella sp. BO1]
 gi|306273293|gb|EFM55162.1| flagellar basal body rod protein FlgF [Brucella sp. BO1]
          Length = 243

 Score =  155 bits (391), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 80/242 (33%), Positives = 130/242 (53%), Gaps = 4/242 (1%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
             S  +GL++ + LE+R+  +A N++N  TVGFR    KF  +V    +D    +SF  +
Sbjct: 3   NNSIYVGLSSLITLERRMDAIAHNVANVSTVGFRGEGTKFDTIVSDKASD---DVSFATA 59

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
           GK Y+  E G  I T   LD A++GDAW +  +P+G + +RDGR K+   G LVS +G  
Sbjct: 60  GKSYIRTEAGPLIKTDNPLDVAVKGDAWMSFSTPQGQVYSRDGRMKMLSTGDLVSVTGNA 119

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
             LD+   PI +        +   G I Q G  +  +GLY++           SG+ P+ 
Sbjct: 120 I-LDVGGEPIVLNPGGGAPRISSDGAIYQNGVQVGAIGLYTIPADADVAYAGTSGVIPSK 178

Query: 182 PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           P  P+ D + V V +G +E SN ++M EM ++I +++ F  +  L+ + E ++ EAI+ +
Sbjct: 179 PAQPVVDDNSVGVVQGMIEGSNVDAMTEMTRLISISRAFEQVNNLLSQQETTVSEAIKTL 238

Query: 242 AS 243
            S
Sbjct: 239 GS 240


>gi|85715052|ref|ZP_01046037.1| hypothetical protein NB311A_11787 [Nitrobacter sp. Nb-311A]
 gi|85698249|gb|EAQ36121.1| hypothetical protein NB311A_11787 [Nitrobacter sp. Nb-311A]
          Length = 262

 Score =  155 bits (391), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 40/257 (15%), Positives = 87/257 (33%), Gaps = 21/257 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55
             +         A E  +  +++N++N  T G++  +  F +++      +  +      
Sbjct: 1   MRALYTAATGMAAQELNVQVISNNIANLRTTGYKKQRAAFQDLIYDHVRRVGAQASAQGT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                      V +         G+   TG +LD A+ G+ +F +  P G    TRDG F
Sbjct: 61  ILPVGIDLGGGVKTVGTPRQMSQGTLSQTGNDLDIAIRGEGFFKILMPDGTFQYTRDGTF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           ++ + G +V+A G      +                V           V+  +GL     
Sbjct: 121 QMDNQGRIVNAQGNPVQPTITIPQNSAGITINSQGQVSVTLPGQTTPTVLGQIGLTRFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++         P +D          +++  LE +N   + E+  +I   + +
Sbjct: 181 KAGLQPVGDNNFKETPASGPFQDGIANIDGFGDMQQSSLEQANVEVVSEISDLIAAQRAY 240

Query: 221 NSITTLIDENEKSMLEA 237
                ++   ++ +  A
Sbjct: 241 EMNAKVVSAADQMLQSA 257


>gi|169831903|ref|YP_001717885.1| hypothetical protein Daud_1757 [Candidatus Desulforudis audaxviator
           MP104C]
 gi|169638747|gb|ACA60253.1| protein of unknown function DUF1078 domain protein [Candidatus
           Desulforudis audaxviator MP104C]
          Length = 310

 Score =  155 bits (391), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 53/307 (17%), Positives = 98/307 (31%), Gaps = 68/307 (22%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++     + R+  +A+N++N +T  F+  +V F E++               
Sbjct: 1   MIRSLTSGVSGLRNHQVRMDVIANNIANVNTTAFKAGRVNFQEILSQNIRGTSASTIGVD 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-----ILTRD 103
                Q    ++     +    G+  +T   LD A++G+ +F L             TRD
Sbjct: 61  SINPAQIGLGMSVQSIDILFGQGALTTTYRVLDMAIDGNGFFRLGKYSDEGIIEYYYTRD 120

Query: 104 GRFKVTDDGSLVSASGKYPVL------------------------------------DMA 127
           G F V +DG LVS+ G + +                                     D +
Sbjct: 121 GAFYVDNDGYLVSSGGLHVLGVGQNGASWLTEDAIKTVVNRTYSVEAGFSGERIRLFDPS 180

Query: 128 SVPIQIPQKDEIFNVGEKGEISQKGKV--IATMGLYSVDMSQGFVRRENSGISPNI---- 181
            V   +        +   G I   G+    A + + +    +   R   +     +    
Sbjct: 181 GVDPGLENNLTTLRIDPNGLIFVNGRTDRAALILIDNYGNPENLTRLGGNLYEVPLRGQN 240

Query: 182 ---------PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
                       P        +  G LE SN +   E   MI   + F +   +I  +++
Sbjct: 241 AEPTPYNEGWGVPDSGGGQGRLVSGALEMSNVDLSAEFANMITTQRGFQANARVITVSDE 300

Query: 233 SMLEAIR 239
            + E I 
Sbjct: 301 MLQELIN 307


>gi|94495409|ref|ZP_01301989.1| flagellar basal-body rod protein [Sphingomonas sp. SKA58]
 gi|94424797|gb|EAT09818.1| flagellar basal-body rod protein [Sphingomonas sp. SKA58]
          Length = 262

 Score =  155 bits (391), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 44/258 (17%), Positives = 89/258 (34%), Gaps = 20/258 (7%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK-------- 55
           + ++      A   ++  +A+N++N +T GF+  +  F  +                   
Sbjct: 5   ALHVARTGLDAQNTKMRVIANNLANVNTTGFKKDRADFETLAYQQIVQAGANSDAENKFA 64

Query: 56  -----ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVT 109
                 S VA          G+   T   LD A+EG  +F ++ P   I  +R G F VT
Sbjct: 65  TGLNLGSGVALQGTSKINSQGTLTQTSNALDMAIEGSGYFQVQQPDGSIAYSRAGNFSVT 124

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDMSQG 168
            +G++V+  G   +  +                     +   +   +  + L S     G
Sbjct: 125 AEGTIVTGDGLPLIPQITVPQGATSVSIGNDGTVSATLQGESEPSQLGQIELASFMNPSG 184

Query: 169 FVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223
                 + +         +           ++ G+LE SN N + E+  MI   + +   
Sbjct: 185 LQSIGGNLLVETAASGTPQVGVAGLEGRGVIRSGYLETSNVNIVEELVDMIETQRAYEVN 244

Query: 224 TTLIDENEKSMLEAIRNI 241
           + +I   ++ +    +NI
Sbjct: 245 SKMIKATDEMLQYVNQNI 262


>gi|218135322|ref|ZP_03464126.1| hypothetical protein BACPEC_03227 [Bacteroides pectinophilus ATCC
           43243]
 gi|217990707|gb|EEC56718.1| hypothetical protein BACPEC_03227 [Bacteroides pectinophilus ATCC
           43243]
          Length = 276

 Score =  155 bits (391), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 43/270 (15%), Positives = 88/270 (32%), Gaps = 30/270 (11%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S     +   A +  + T+A+N++N +T G++T   +F  ++               
Sbjct: 5   MMRSLWTAASGMTAQQTNVDTIANNLANVNTTGYKTESAEFKTLLYQNLQTKTTTANGEN 64

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF-ALESPRGIILTRDGRFK 107
                Q      +         G F+ +     FA+ GD +F  +        TR+G F 
Sbjct: 65  KPVNAQVGLGTRNSSITSHYTQGQFLDSDNTFSFAINGDGFFGVMGDDGNTYYTRNGNFF 124

Query: 108 ----VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT------ 157
                     L ++ G   +    +       +     V   G+                
Sbjct: 125 ISPLQDGSMMLCTSDGNAVLNSEGAPITFNNMEANKITVDADGQFMYPDDTGNPAAIGIQ 184

Query: 158 MGLYSVDMSQGFVRRENSGISPNI------PPTPLEDLSGVTVKRGFLEDSNANSMYEMG 211
            GLY      G  +     ++           +  +      +K+G+LE SN N   EM 
Sbjct: 185 FGLYQFTNPSGLDKTSGGLLAATDASGDALNESVDQVTKKSQLKQGYLEGSNVNVATEMV 244

Query: 212 QMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
            +I   + +   +  I+ +++ + +A   +
Sbjct: 245 NLITAQRAYELNSKAINASDEMLQQA-NQL 273


>gi|251772412|gb|EES52979.1| flagellar basal-body rod protein FlgG [Leptospirillum
           ferrodiazotrophum]
          Length = 261

 Score =  155 bits (391), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 41/260 (15%), Positives = 79/260 (30%), Gaps = 21/260 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S     +   + +  L  + +N++N +T G++  +  F +++               
Sbjct: 1   MFRSLWNAASGMESQQANLDVITNNLANVNTTGYKRQRANFQDLMYQTMVPPGEASSLEG 60

Query: 54  -------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGR 105
                  Q                GS  +T   LD A++G+ +F ++ P      TRDG 
Sbjct: 61  NQVPTGLQVGMGSRLASVQKVFLQGSLRTTNNPLDVAIQGNGFFTVKLPDGRQAYTRDGT 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVD 164
           F +   G +V+  G      +                V            +  + L    
Sbjct: 121 FNIDSHGRIVTPEGLTTDPQIVVPKTAKSIHVAPDGEVTATVAGQSAPVKLGQLVLAQFI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G   R N+              +        ++ GFLE SN N   E+  M+   + 
Sbjct: 181 NPAGLSSRGNNLFMETSASGKPTLSNPGVNGAGRLQSGFLEASNVNVAEELVNMVIGQRA 240

Query: 220 FNSITTLIDENEKSMLEAIR 239
           +    + I    + +     
Sbjct: 241 YQMDASSIRTVNRMLGYTAT 260


>gi|262653|gb|AAB24739.1| flagellar basal body distal rod protein [Caulobacter vibrioides]
          Length = 262

 Score =  155 bits (391), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 40/263 (15%), Positives = 90/263 (34%), Gaps = 22/263 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             +     +   A +  +  +++N++N +TVGF+  + +F +++                
Sbjct: 1   MQALRTAASGMAAQQLNVEVISNNIANMNTVGFKRQRAEFQDLLYQTIERAGSQSSSDGN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q    V +G  Y   E G+   T + LD A++G  +  +  P      TR G F
Sbjct: 61  IVPTGVQVGGGVKAGSVYRITEQGTPTLTDSPLDLAIQGKGYMPILLPSGETAYTRAGNF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFN-VGEKGEISQKGKVIATMGLYSVDM 165
              D G +V+  G      +                V  K +   + + +  + L +   
Sbjct: 121 STNDQGQIVTEDGYLVQPGITIPQNATDITISKSGLVQVKLDGQPQPQTVGQIQLANFLN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVTVK-----RGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++             +   +           E SN +++ E+  +I   + +
Sbjct: 181 EGGLEAIGDNLFLETAASGAATLVRRASRALACCCSTDTEASNVDAVSEITALITAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNIAS 243
              + +I   ++ + +A   + S
Sbjct: 241 EMNSKVISTADQML-QATSQLRS 262


>gi|119384847|ref|YP_915903.1| flagellar basal body rod protein FlgG [Paracoccus denitrificans
           PD1222]
 gi|119374614|gb|ABL70207.1| flagellar basal-body rod protein FlgG [Paracoccus denitrificans
           PD1222]
          Length = 261

 Score =  155 bits (391), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 102/259 (39%), Gaps = 21/259 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             +  I  +   A + R+  +++N++N  T G+   + +F+++                 
Sbjct: 1   MRALQIAASGMSAQQMRVDVISNNLANMSTTGYNARRAEFADLQYQQATRPGTLTATNGA 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q    V      +    G+ + T  +LD A+EG+ +  +  P GI   TRDG  
Sbjct: 61  MVPAGVQLGLGVRPASVTVMLAQGTPVQTNGDLDIAIEGNGYLEVTLPSGISAYTRDGSL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           K + +G +V++ G   V D+      +    +    V    +   + + +  + L +   
Sbjct: 121 KRSAEGQVVTSEGYPLVPDITIPEDARSIAINADGQVFAYFDDRVEPENLGQITLANFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
            +G     ++           +  +       T++ GFLE+S+ + + E+ ++I   + +
Sbjct: 181 GKGLEAVGSNMFLETPASGAPQVAAPGQEGLGTIRAGFLEESSVDPVREIAELIKAQRGY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              + +I   ++ +   ++
Sbjct: 241 ELNSKVITAADQMLGTTVQ 259


>gi|283834453|ref|ZP_06354194.1| flagellar basal-body rod protein FlgG [Citrobacter youngae ATCC
           29220]
 gi|291070000|gb|EFE08109.1| flagellar basal-body rod protein FlgG [Citrobacter youngae ATCC
           29220]
          Length = 261

 Score =  155 bits (391), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 88/261 (33%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  I      A +  +S +A+N++N +T GF+  +V F ++    +           
Sbjct: 1   MNAALWISKTGLSAQDAEMSAIANNIANVNTTGFKRDRVMFQDLFYQTQEAPGAMLDQNN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106
                 Q  S V       +   G+  +T   ++ A+ G  ++ ++     I  TRDG  
Sbjct: 61  IMPTGMQFGSGVRIVGTQKTFTEGNVETTDNTMNVAIMGQGFWQVQKANGDIAYTRDGNL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165
           +V  DG L +A G     ++                             +  + L +   
Sbjct: 121 QVNADGVLTNAQGLPLQPEIDVPAGSTQVAFAPDGTVSAILPGDSDPTELGQLTLVNFAN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++            +         T++ G LE SN + + EM  MI + + +
Sbjct: 181 PAGLSAEGDNLYLETAASGQPTEGIPGEDGLGTLQDGALEGSNVDIVNEMVAMITVQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
                ++   +  +    + +
Sbjct: 241 EMNAKMVSAADDMLQFISQTL 261


>gi|218703527|ref|YP_002411046.1| flagellar basal body rod protein FlgG [Escherichia coli UMN026]
 gi|218430624|emb|CAR11490.1| Flagellar basal-body rod protein (flgG-like) (Distal rod protein)
           [Escherichia coli UMN026]
          Length = 303

 Score =  155 bits (391), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 40/261 (15%), Positives = 86/261 (32%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  I      A +  +S +A+N++N +T GF+  +V F ++    +           
Sbjct: 43  MNAALWISKTGLSAQDAEMSAIANNIANVNTTGFKRDRVMFQDLFYQTQEAPGAMLDQNN 102

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106
                 Q  S V       +   G+  +T   ++ A+ G  +  ++     I  TRDG  
Sbjct: 103 IMPTGLQFGSGVRIVGTQKTFTEGNVETTDNAMNVAIMGQGFLQVQKANGDIAYTRDGNL 162

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165
           +V  DG L ++ G     ++                             +  + L +   
Sbjct: 163 QVNADGVLTNSQGLPLQPEIDVPAGATNVAFGEDGTVTAILPGDSDVTELGQLTLVNFAN 222

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++            +         T++   LE SN + + EM  MI + + +
Sbjct: 223 PAGLSAEGDNLYLETAASGQPTEGVPGEDGLGTLQDNALEGSNVDIVNEMVAMITVQRAY 282

Query: 221 NSITTLIDENEKSMLEAIRNI 241
                ++   +  +    + +
Sbjct: 283 EMNAKMVSAADDMLQYISQTL 303


>gi|162147478|ref|YP_001601939.1| flagellar basal body rod protein FlgG [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209545587|ref|YP_002277816.1| flagellar basal body rod protein FlgG [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|161786055|emb|CAP55637.1| putative flagellar basal-body rod protein flgG [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209533264|gb|ACI53201.1| flagellar basal-body rod protein FlgG [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 262

 Score =  155 bits (391), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 98/260 (37%), Gaps = 21/260 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S +I      A    + T+++N++N  T G++  + +F +++      +        
Sbjct: 1   MMPSLDIAATGMQAQTTNVDTISNNIANMTTTGYKRRRAEFQDLIYQDVRRVGTMSSDTG 60

Query: 56  ---------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGR 105
                       V +   Y   E G+   T   LD A++G  +F +  P G    TRDG 
Sbjct: 61  DLVPAGAQIGLGVRTAGIYRINEQGTLEQTSNALDMAIQGPGYFQVTLPSGEYAYTRDGT 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQK-DEIFNVGEKGEISQKGKVIATMGLYSVD 164
           F +++DG++V+A G     ++           D+   V        + +V   + L    
Sbjct: 121 FSLSEDGTIVTADGYPLSPNITLPNNAENITVDQSGQVQYTISGQTQAQVAGQIQLGIFQ 180

Query: 165 MSQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +  +             +      +++GF+E+S+ N + E+  +I   + 
Sbjct: 181 NENGLAAMGQNLFTQTTSSGDAILGTPQAQGYGLIQQGFIEESSVNVVTEITDLITAQRA 240

Query: 220 FNSITTLIDENEKSMLEAIR 239
           +   + +I  +++ +     
Sbjct: 241 YEMNSKVITASDEMLQTLTN 260


>gi|326792665|ref|YP_004310486.1| flagellar hook-basal body protein [Clostridium lentocellum DSM
           5427]
 gi|326543429|gb|ADZ85288.1| flagellar hook-basal body protein [Clostridium lentocellum DSM
           5427]
          Length = 271

 Score =  155 bits (390), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 45/272 (16%), Positives = 96/272 (35%), Gaps = 30/272 (11%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +     +   A +  + T+++NM+N +T  ++     F  ++     + +       
Sbjct: 1   MIRALYTAASGMTAQQLNVDTISNNMANVNTAAYKKETTNFKSLLYTTMGEANDPNAQTA 60

Query: 54  ----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKV 108
               Q    V +         G    TG E D AL G+ +FA+ ++    + TRDG F+ 
Sbjct: 61  PTVKQVGHGVRALANSRDYTNGILQETGNESDLALVGNGFFAIGQTDGSEVYTRDGSFRF 120

Query: 109 ----TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFN-------VGEKGEISQKGKVIAT 157
                +    +  +  +PVL      I +  +  +              + +     +A 
Sbjct: 121 AMIPDEGSYALVTADGHPVLSTEGESIVVGTEIPMDKLEIGQDGNIYYLDETGLEMDVAQ 180

Query: 158 MGLYSVDMSQGFVRRENSGI------SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMG 211
           + +       G     ++           +     + L+  T++ G+LE SN     EM 
Sbjct: 181 IRIVQFANRAGLEAVGDNLYKETPASGEPLAEVDDDGLTKTTIRTGYLEGSNVQIAQEMV 240

Query: 212 QMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
            +I   + +   +T I   +  + +A   + S
Sbjct: 241 NLIIAQRAYEINSTAIKAADDMLGQA-NQLKS 271


>gi|56695100|ref|YP_165447.1| flagellar basal body rod protein FlgG [Ruegeria pomeroyi DSS-3]
 gi|56676837|gb|AAV93503.1| flagellar basal-body rod protein FlgG [Ruegeria pomeroyi DSS-3]
          Length = 261

 Score =  155 bits (390), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 106/259 (40%), Gaps = 21/259 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             +  I      A + R+ T+++N++N +T G+   + +F+++                 
Sbjct: 1   MRALKIAATGMSAQQMRVETISNNLANMNTTGYNARRAEFADLHYQQIARAGTVNASDGT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q    V      +  E G+  +TG +LD A+EG  +F +  P G    TRDG  
Sbjct: 61  VLPTGVQLGLGVRPAAVTVHLEQGALSATGNDLDLAIEGRGYFEVTLPSGQSAFTRDGSL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           K + +G +V++ G   V ++      +    +    V    + + +G+++  + L     
Sbjct: 121 KRSAEGLIVTSDGLSVVPEITIPSDARSISINAAGEVYAYFDDAAEGQLLGQVTLAGFTN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
           ++G     ++              +       T+++G+LEDS+ +++ E+ ++I   + +
Sbjct: 181 AKGLEAIGSNLFKETEASGSPITGNPGEDGLGTLRQGYLEDSSVDAVREVTELIEAQRGY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
                +I   ++ M    +
Sbjct: 241 EMNAKVISAVDQMMSATTQ 259


>gi|312126441|ref|YP_003991315.1| fagellar hook-basal body protein [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311776460|gb|ADQ05946.1| fagellar hook-basal body protein [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 255

 Score =  155 bits (390), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 51/258 (19%), Positives = 102/258 (39%), Gaps = 21/258 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVG--------AIK 49
           M        +  +  ++ +   A+N+ N  T GF+        F  ++         +  
Sbjct: 1   MIRGIYTSASGMILNQKLMDITANNVGNVSTTGFKRDVAQVESFRNMLAYRIYDKPSSPD 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP-----RGIILTRDG 104
           N I          +       G +I T   L+ A+ G+ +FA+E P     + I+ TR+G
Sbjct: 61  NAIGYMSLGSDVSRIVSDFSQGLYIKTDEPLNLAIRGNGFFAVEMPNNQGAQQILYTRNG 120

Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
            F +   G LV+  G Y +         + Q      + E+G + Q G+ +  + +    
Sbjct: 121 AFTLNSRGELVTLDGFYVLG---QNGRIVLQNGGQVRIDEQGNVYQDGRFVDRLRVVDFQ 177

Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224
             Q   +  N+    +     +       + +G+LE SN NS+ EM  MI++ + + +  
Sbjct: 178 DKQLLRKVGNNLFEADALSQSIPFS--GKIIQGYLEGSNVNSVQEMVNMINVLRAYEANQ 235

Query: 225 TLIDENEKSMLEAIRNIA 242
                 ++++ +A+  IA
Sbjct: 236 KAFVIQDETLQKAVNEIA 253


>gi|170755157|ref|YP_001782254.1| flagellar basal body rod protein FlgG [Clostridium botulinum B1
           str. Okra]
 gi|169120369|gb|ACA44205.1| flagellar basal body rod protein [Clostridium botulinum B1 str.
           Okra]
          Length = 263

 Score =  155 bits (390), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 53/264 (20%), Positives = 107/264 (40%), Gaps = 24/264 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI----------KN 50
           M  +     +  +A + +L ++++N++N +TVG++   V F E+V             + 
Sbjct: 1   MLRALWNSKSGLIAQQNKLDSISNNLANVNTVGYKREDVSFQELVQETLKRKGYPTSDRP 60

Query: 51  DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVT 109
           +I       A+     + + G  ++TG + D A++G  +F +  P G     R G F V 
Sbjct: 61  EIQTGTGVKATNWIRDTHQQGILLNTGNKTDLAIDGQGFFRVIMPDGNYAYERSGNFVVD 120

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-----------IATM 158
            +G LV  +G    + +                     I++ G +           +  +
Sbjct: 121 RNGMLVDENGNRLEIQLQQPEGSQILNRIGEFSKNNINIAEDGSISVKDIDGINKMVGKI 180

Query: 159 GLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
            +Y+   S  FV    +   P      +   + V++ +GFLE+SN ++  EM +MI   +
Sbjct: 181 NIYNAVGSDAFVSIGRNLYIPQ-EGVNVFANNDVSILQGFLENSNVDAGKEMTEMIITQR 239

Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242
            F   +  I   ++ M   + N+ 
Sbjct: 240 AFELSSRGIKTADE-MWGIVNNLR 262


>gi|315929129|gb|EFV08356.1| flagellar basal-body rod protein FlgG [Campylobacter jejuni subsp.
           jejuni 305]
          Length = 250

 Score =  155 bits (390), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 39/250 (15%), Positives = 91/250 (36%), Gaps = 21/250 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55
             S +      +A + ++   ++N++N +T GF+  + +F++++  +             
Sbjct: 1   MRSLHTAATGMVAQQTQIDVTSNNIANVNTAGFKKSRAEFADLMYQVMKYAGTSTSATTL 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                   +    +    +  E     ++   LD A+ G+ +F ++ P G I  TR+G+F
Sbjct: 61  SPSGIEVGVGVRPTAVTKVFTEGNLKSTSTDGLDMAIAGNGFFQIQLPDGTIGYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165
              ++G++V++ G   + +M                        Q+   I  + L     
Sbjct: 121 TKDNEGNIVNSDGYRLLPEMTIPEGATAINVATDGTVSVMLPGEQQETQIGQVELVQFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++                      T++ GF+E SN   + EM  +I   + +
Sbjct: 181 PAGLHSMGDNLYLETGASGAPVAGIAGQDGLGTIRHGFIELSNVQLVEEMTDLITGQRAY 240

Query: 221 NSITTLIDEN 230
            + +  I  +
Sbjct: 241 EAGSKAITTS 250


>gi|239907793|ref|YP_002954534.1| flagellar basal-body rod protein FlgG [Desulfovibrio magneticus
           RS-1]
 gi|239797659|dbj|BAH76648.1| flagellar basal-body rod protein FlgG [Desulfovibrio magneticus
           RS-1]
          Length = 261

 Score =  155 bits (390), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 52/259 (20%), Positives = 100/259 (38%), Gaps = 24/259 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF-- 58
           M+ S    +   L+ E RL+  A+N++N +T G++  +V F +      +D         
Sbjct: 1   MEMSMYSAVFGALSTETRLNISANNLANVNTTGYKRDRVSFEDTFYRYAHDYHMDPRGDI 60

Query: 59  --------------VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRD 103
                              + +    G+  +TG  LD A++G  +F + + +     TR+
Sbjct: 61  RQKQLLPRADLIAKPRLAMQQIDFAQGALTATGNPLDLAIQGPGFFKVSAGQGNSYYTRN 120

Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
           G F  + +G LV+       + +      I   +   +VG  G +   G  +  + + +V
Sbjct: 121 GAFHRSAEGMLVN----DQDMPVLGGGGPIQLPEGRISVGGDGAVYVDGAQVGQVDVVTV 176

Query: 164 DMSQGFVRRENSGISPNIPPTPLE---DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
                 ++   +   P    T  E         V +GFLE  N   + EM  MI   + F
Sbjct: 177 QNPDALMKYGANLYMPQTGATVQEGVLRAGTTEVAQGFLEKPNVEVVEEMVSMIETQRTF 236

Query: 221 NSITTLIDENEKSMLEAIR 239
            +   ++  + +   +AIR
Sbjct: 237 EAYQKVMSSSNELDTKAIR 255


>gi|295400717|ref|ZP_06810694.1| fagellar hook-basal body protein [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|312112591|ref|YP_003990907.1| fagellar hook-basal body protein [Geobacillus sp. Y4.1MC1]
 gi|294977298|gb|EFG52899.1| fagellar hook-basal body protein [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|311217692|gb|ADP76296.1| fagellar hook-basal body protein [Geobacillus sp. Y4.1MC1]
          Length = 274

 Score =  154 bits (389), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 54/274 (19%), Positives = 94/274 (34%), Gaps = 35/274 (12%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDI----- 52
           M   F    +  +A ++R+  + +N++N +T G++  +     F E+  +   +      
Sbjct: 1   MLRGFYTAASGMMAQQRRVEMLTNNIANANTPGYKADQAALRAFPELFLSRLEETTVPTK 60

Query: 53  ------------DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA---------WFA 91
                           + V   +       G    TG   D AL   A         +  
Sbjct: 61  EAPRSFPFNAAVGPINTGVYMQELIPDFRQGDIKETGRPTDIALINGALPAAGGTLFFVV 120

Query: 92  LESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQK 151
                 I  TR+G F V   G L +  G Y + +      +I    E F V   G I   
Sbjct: 121 QNENGDIRYTRNGNFTVNPQGFLTTNDGWYVLDENGQ---RIALPSEDFTVNADGTIVAG 177

Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV---TVKRGFLEDSNANSMY 208
              IA + +         V+  N          P    +     T K+GF+E SN +   
Sbjct: 178 NARIARINIAFAANPNTLVKEGNGLFRSEAGMLPSALNNPNVTYTFKQGFVERSNVDLNR 237

Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            M +M+   + F +   ++   +KSM +A+  I 
Sbjct: 238 AMTEMLSAYRAFEANQKIVQAYDKSMEKAVNEIG 271


>gi|322382385|ref|ZP_08056292.1| FlgG-like protein [Paenibacillus larvae subsp. larvae B-3650]
 gi|321153738|gb|EFX46113.1| FlgG-like protein [Paenibacillus larvae subsp. larvae B-3650]
          Length = 266

 Score =  154 bits (389), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 44/263 (16%), Positives = 91/263 (34%), Gaps = 28/263 (10%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND------------I 52
              G++     + +L  + +N++N +T+GF+  +V F +++                   
Sbjct: 1   MYSGISGMRGFQTKLDVIGNNIANVNTIGFKGSRVMFQDLMSQTIRGATGPTDTQGGVNG 60

Query: 53  DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI---ILTRDGRFKVT 109
            Q                   ++T  + D  +EGD +FA+++        LTR G FKV 
Sbjct: 61  QQIGLGSTVASIDTLHTNTGAMNTYVKTDMRIEGDGYFAVKTSSESDTYYLTRAGNFKVD 120

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ----KGKVIATMGLYSVDM 165
               LV+A G   +              +     +          + + I  +G+  V  
Sbjct: 121 AQRRLVTADGMLVLNSDGDPIEFSENMTDYSFGADGTITQILKGGEKETIGQIGVVKVTN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL---------SGVTVKRGFLEDSNANSMYEMGQMIHL 216
             G ++   +           +              T+  G LE SN +   E  +MI  
Sbjct: 181 PSGLMKVGGNLFELTPNAHDGDPGISTPKNAETGTGTLMTGSLEMSNVDLTSEFTEMIVA 240

Query: 217 TQKFNSITTLIDENEKSMLEAIR 239
            + F + + +I  +++ + E + 
Sbjct: 241 QRGFQANSRIITTSDEVLQEVVN 263


>gi|99082800|ref|YP_614954.1| flagellar basal body rod protein FlgG [Ruegeria sp. TM1040]
 gi|99039080|gb|ABF65692.1| Flagellar basal-body rod protein flgG [Ruegeria sp. TM1040]
          Length = 261

 Score =  154 bits (389), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 94/259 (36%), Gaps = 21/259 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             +  I      A + R+ T+++N++N +T  +   + +F+++     +           
Sbjct: 1   MRALKIAATGMSAQQLRVETISNNLANMNTTAYNARRAEFADLHYQQISRAGTVNASDGT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q    V      +    G+   TG ELD A++G+ +F +  P      TRDG F
Sbjct: 61  VLPTGVQVGLGVRPAAVSVYLNQGALSQTGNELDLAIDGNGYFEVTLPSGETAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           K + +G +V+  G     ++                V      + + +++    L     
Sbjct: 121 KRSAEGLIVTNDGYPVSPEITVPEDAKSISINGEGEVYAYFNDTIEAELLGQFTLSGFTN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
            +G      +                       +++ +LEDS+ +++ E+ ++I   + +
Sbjct: 181 PKGLEAMGGNLFKQTEASGQPNTTEPGADGIGFLRQKYLEDSSVDAVREITELIEAQRGY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              + +I   ++ M    +
Sbjct: 241 EMNSKVISAVDQMMSATTQ 259


>gi|311992329|gb|ADQ26738.1| flagellar distal rod protein [Aeromonas hydrophila]
          Length = 261

 Score =  154 bits (389), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 42/258 (16%), Positives = 92/258 (35%), Gaps = 21/258 (8%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK-------- 55
           +  I      A +  +S  ++N++N  TVG++  +  F +++    N    +        
Sbjct: 3   ALWISKTGLDAQQTNISVTSNNLANASTVGYKKSRAIFEDLLYQNINQPGGRSSADTERP 62

Query: 56  -----ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVT 109
                 +         +   G+  +T   LD  + G  +F ++ P G    TR+G+F + 
Sbjct: 63  SGLMLGAGAKVVATQKNHSQGNVQTTDNSLDLMISGRGYFEIQLPDGSAAYTRNGQFTLN 122

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG--KVIATMGLYSVDMSQ 167
            +G++V+    YP+     +P          +     ++   G  +V+  +       + 
Sbjct: 123 SEGTIVTPGNGYPLQPEIQIPENAQSVTIGEDGQVSVQLKGDGASQVVGQINTTDFVNAS 182

Query: 168 GFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNS 222
           G      +                 T     +K+G LE SN N   E+  +I   + +  
Sbjct: 183 GLQPMGENMFVETQSSGAPVQGVAGTDGLGVIKQGMLETSNVNVTEELVNLIQAQRVYEM 242

Query: 223 ITTLIDENEKSMLEAIRN 240
            + ++   +  M   I+ 
Sbjct: 243 NSKVLSAVDGMMSFLIQR 260


>gi|168699693|ref|ZP_02731970.1| flagellar basal body rod protein FlgG [Gemmata obscuriglobus UQM
           2246]
          Length = 263

 Score =  154 bits (389), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 39/259 (15%), Positives = 87/259 (33%), Gaps = 21/259 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +              +   ++N++N +T GF+  +  F +++   +           
Sbjct: 1   MIKALFTSATGMNVQTTAIDNTSNNIANVNTNGFKKGQADFQDLLYVSQRAPGSDAAAGL 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  S             G+ ++T    D A+EG+ +F +  P G    TRDG  
Sbjct: 61  QVPTGLQIGSGARVAGITKVFTPGALVNTQNPFDVAVEGEGFFQVTLPSGELRYTRDGAL 120

Query: 107 KVTDDGSLVSASGK--YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
           ++   G+LV++ G    P + + +  + +    +     +         V+  + L    
Sbjct: 121 RLNAQGNLVTSDGFLISPQVTIPTQAVSVSVGSDGTISVQNAGALNASTVLGQLTLVRFQ 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +  +           +         ++GFLE SN + + E+  +I   + 
Sbjct: 181 NPAGLSAEGRNLFAETASSGTPLIATPGQNGVGFTRQGFLERSNVDVVTELINLILAQRA 240

Query: 220 FNSITTLIDENEKSMLEAI 238
           +   T  +   +  +    
Sbjct: 241 YEFNTRAVRTADNMLASTT 259


>gi|312115282|ref|YP_004012878.1| flagellar basal-body rod protein FlgF [Rhodomicrobium vannielii
           ATCC 17100]
 gi|311220411|gb|ADP71779.1| flagellar basal-body rod protein FlgF [Rhodomicrobium vannielii
           ATCC 17100]
          Length = 241

 Score =  154 bits (389), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 79/243 (32%), Positives = 133/243 (54%), Gaps = 5/243 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           MQ+S  + L+AQ+AL++RL TVA N++N +TVG+R  ++KF  V+ A      Q  +FV 
Sbjct: 1   MQSSLYVALSAQVALQKRLDTVAQNVANANTVGYRGTEMKFDSVLSAAD---AQMTAFVT 57

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           S    +S   G  I TG  LD AL+G  W ++++P G + TRDGR ++T  G LVS  G 
Sbjct: 58  SKDGVVSLGAGGLIKTGNPLDVALKGQGWLSVQAPAGRMYTRDGRIQLTTSGMLVSMRG- 116

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
           +PVLD    P+Q+        + E G ++Q  + +  +G++         R E  G   +
Sbjct: 117 HPVLDAGGAPMQVDPNGPTPQIAEDGTVTQNNERVGVLGVFVFGSDAKLSRVEG-GFIAD 175

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
            P     D +  ++  G++E+SN N++ E  ++I++ + F+   + I   E  +  AI++
Sbjct: 176 KPAIAATDPAKSSMASGYVEESNVNAIKETARLIYVQRAFDEAASTIQSVESGLKSAIQS 235

Query: 241 IAS 243
           + S
Sbjct: 236 LGS 238


>gi|294679032|ref|YP_003579647.1| flagellar basal-body rod protein FlgF [Rhodobacter capsulatus SB
           1003]
 gi|294477852|gb|ADE87240.1| flagellar basal-body rod protein FlgF [Rhodobacter capsulatus SB
           1003]
          Length = 237

 Score =  154 bits (389), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 72/241 (29%), Positives = 119/241 (49%), Gaps = 5/241 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    LA Q  L Q +  VA+NM+N +T GFR   V FSE V ++  D +  +S   
Sbjct: 1   MDNTIYAALARQSGLMQEMQVVANNMANVNTTGFRREGVVFSEYVDSLDGD-EASLSMAH 59

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           +    +  + G+  STG +LDFA++G+ +F +E+P G  LTR G F  + +G LV+  G 
Sbjct: 60  ASGRTIDFDSGAVASTGNQLDFAIQGEGFFMIETPEGNQLTRAGSFLRSPEGELVTPEGF 119

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
              LD     I +P       VGE G +S KG+ +A +GLY    S     +  +  +  
Sbjct: 120 RV-LDNGGSAIFLPADQGPIAVGEDGTLSAKGQPLAQLGLYEPQNSTSISLQAGTRFAVP 178

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
               P E+     V +G +E SN + + E+ +M+ + + +    T +D  ++ +   I  
Sbjct: 179 EGTVPAEN---ARVMQGAVEQSNVDPVREIARMVEVQRAYELGQTFLDREDERIRNVIST 235

Query: 241 I 241
           +
Sbjct: 236 L 236


>gi|85706168|ref|ZP_01037263.1| flagellar basal-body rod protein FlgF [Roseovarius sp. 217]
 gi|85669332|gb|EAQ24198.1| flagellar basal-body rod protein FlgF [Roseovarius sp. 217]
          Length = 237

 Score =  154 bits (389), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 66/241 (27%), Positives = 114/241 (47%), Gaps = 6/241 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M+T+    L  Q  L + L  VA+N++N  T G+R   + FSE V    ++    +S   
Sbjct: 1   METAGYTTLTRQSGLLRELQVVANNIANAATTGYRQEGLIFSEFVKR--SEGGPSLSMAQ 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
                 S   G    TG  LD A+EG+ +F +E+P G  LTR G F ++  G LV+  G 
Sbjct: 59  GNVRMTSTVQGPLRPTGGTLDLAIEGEGFFLIETPSGERLTRAGAFTLSAQGDLVTPDGF 118

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
              LD    P+ +P   +   +   G +S  G+ +A +GL     S   +R +      N
Sbjct: 119 RV-LDAGGAPVFVPPDAKSIGLSPDGTLSDNGRPLAQIGLVRPIDSLDVIREDGVLFRTN 177

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
               P+ED     V +GFLE +N + + ++ +MI + + +    + +D   + ++ A+ +
Sbjct: 178 GGFEPVEDG---RVLQGFLEGANVDPIGQIARMIEVQRAYEMGQSFLDSENERVMTALDS 234

Query: 241 I 241
           +
Sbjct: 235 L 235


>gi|292669970|ref|ZP_06603396.1| flagellar basal-body rod protein FlgG [Selenomonas noxia ATCC
           43541]
 gi|292648382|gb|EFF66354.1| flagellar basal-body rod protein FlgG [Selenomonas noxia ATCC
           43541]
          Length = 275

 Score =  154 bits (389), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 45/274 (16%), Positives = 91/274 (33%), Gaps = 34/274 (12%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51
           M     I  +  +   +    +A+N++N  T G++   +   +F  ++    ND      
Sbjct: 1   MWRGLYIAASGMITETKHTDMIANNLANAATTGYKRDDMAIREFEPMLLRRINDYSADAD 60

Query: 52  ----------------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP 95
                           + +     A  +       G+  +TG   DF + G+ +F + +P
Sbjct: 61  VTSFKGFRVDGLGAPRVGRLGLGSAVDEIATDHIQGALQTTGNTYDFGISGEGYFVVNTP 120

Query: 96  RGIILTRDGRFKVTDDGSLVSASGKYPVLD---MASVPIQIPQKDEIFNVGEKGEISQKG 152
           +G   TRDG +K+  D  +V+  G           + P           V  +     + 
Sbjct: 121 QGPRYTRDGTWKLDSDRRMVTTDGYLLADGITIGENAPSDSITISGDGRVSYREAGQTQQ 180

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSNANSM 207
           +    + L       G      +    +        +        T+ +G LE SN   +
Sbjct: 181 QEAGQITLARFVNPAGLTAIGKNLFVVSDASGEAIESNPGVDGAGTLTQGTLEMSNVQIV 240

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
            EM  MI   + + S +  I  ++  + E    +
Sbjct: 241 EEMVNMIVSQRAYESNSKAITTSDSML-EIANTL 273


>gi|302383955|ref|YP_003819778.1| flagellar basal-body rod protein FlgF [Brevundimonas subvibrioides
           ATCC 15264]
 gi|302194583|gb|ADL02155.1| flagellar basal-body rod protein FlgF [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 245

 Score =  154 bits (389), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 70/245 (28%), Positives = 117/245 (47%), Gaps = 6/245 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--IDQKISF 58
           M+ +  IGL+ Q+ L + L   A+N++N +T GF+  ++     VG    +  +    SF
Sbjct: 1   MENAAYIGLSRQMTLRRELDIAANNIANAETTGFKVEQLLLGTEVGQRARNDAVRPGASF 60

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGD-AWFALESPRGIILTRDGRFKVTDDGSLVSA 117
           V           G+   TG  LDFA++G+ A+F ++   G   TRDG F +   G LV+ 
Sbjct: 61  VLDNGVGRDFGQGALNETGRTLDFAIDGEGAFFKIQDGAGEAYTRDGAFTIDPTGQLVTK 120

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177
           SG   + D    PI +       +V E G ISQ G  + T+ L   D       ++  G+
Sbjct: 121 SGLPVLGD--GGPIVVDPARGALSVAEDGTISQGGAALGTLSLARFDNLAVL-SKDGDGL 177

Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
             N    P  D +GV V++G LE SN N++ E+  +I +T+ +   T +I+  +     +
Sbjct: 178 YRNASNAPALDATGVQVRQGMLEGSNVNTLVEITNLIEITRAYERATKMIENVQDLSRRS 237

Query: 238 IRNIA 242
           +  + 
Sbjct: 238 VERLG 242


>gi|54307272|ref|YP_128292.1| putative FlgG flagellar basal-body rod protein [Photobacterium
           profundum SS9]
 gi|46911692|emb|CAG18490.1| Putative FlgG flagellar basal-body rod protein [Photobacterium
           profundum SS9]
          Length = 261

 Score =  154 bits (389), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 41/255 (16%), Positives = 90/255 (35%), Gaps = 20/255 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  I      A + ++  +++N++N +TVGF+  +  F ++   +K           
Sbjct: 1   MHAALWISKTGLAAQDTQMQVISNNLANVNTVGFKQDRAVFEDLFYQMKKQPGAMTDQQN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRF 106
                 Q  + V         + G++ +T    D A+ G  +F +E +      TR+G+F
Sbjct: 61  ENPGGLQLGNGVRVVGTQKLMKTGAYQNTEQATDLAVLGSGFFQIELADGNTGYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLD-MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
               +G +V+A+G   + +                 V        + + I  + L +   
Sbjct: 121 HRNSEGMMVTAAGLPLMPNIEIPENATNFSVGTDGMVTISTADDPEPQEIGQITLANFAN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
           + G      +            +          + +  LE SN N + EM  MI   + +
Sbjct: 181 AAGLQSLGGNLFKETGASGAPIEGVGGEDGLGQISQFSLEGSNVNVVEEMVNMITTQRAY 240

Query: 221 NSITTLIDENEKSML 235
                ++   ++ + 
Sbjct: 241 EMNAKVVSSADQMLK 255


>gi|88704304|ref|ZP_01102018.1| Flagellar basal-body rod protein flgG [Congregibacter litoralis
           KT71]
 gi|88701355|gb|EAQ98460.1| Flagellar basal-body rod protein flgG [Congregibacter litoralis
           KT71]
          Length = 243

 Score =  154 bits (389), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 43/243 (17%), Positives = 88/243 (36%), Gaps = 20/243 (8%)

Query: 19  LSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------------QKISFVASGKEY 65
           +ST+A+N++N  T GF+  +  F +++      +              Q  +        
Sbjct: 1   MSTIANNLANVGTTGFKRGRAIFEDLIYQNVRQVGSQSSQDTLLPSGLQIGTGTRVVATE 60

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYPVL 124
                G+   T   LD A++G  +F +  P      TRDG F++ D G +V+++G     
Sbjct: 61  RLFTQGNLTKTDGALDIAIQGRGFFEILLPDGNQAFTRDGSFQINDQGIVVTSAGYQLQP 120

Query: 125 DMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183
            +      +         V  +   +     I  + L       G   R  +    +   
Sbjct: 121 PITVPQDALSVTIAADGTVSVQQPGTAAATQIGLVQLTDFINPAGLQARGENLFLESGAS 180

Query: 184 TPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
              +  +       T+ +G++E SN N + E+  MI   + +   +  I   ++ +    
Sbjct: 181 GAPQPGNPGLNGLGTLSQGYVESSNVNVVEELVNMIETQRAYEMNSRAISTADQMLQYIS 240

Query: 239 RNI 241
            N+
Sbjct: 241 NNL 243


>gi|126730135|ref|ZP_01745947.1| flagellar basal body rod protein [Sagittula stellata E-37]
 gi|126709515|gb|EBA08569.1| flagellar basal body rod protein [Sagittula stellata E-37]
          Length = 237

 Score =  154 bits (389), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 63/238 (26%), Positives = 115/238 (48%), Gaps = 6/238 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M+T+  I L+ Q +L + +  +A+N++N +T GFR   + FSE +   + D    +S  A
Sbjct: 1   METAGYIALSRQSSLLREMQVIANNIANANTTGFRQEGMIFSEYLS--EGDRLDSVSMAA 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
                 S   G    TG+  D A+EG+ +F + +P G  LTR G F  + +G LV+  G 
Sbjct: 59  GRIHKTSFAQGELEPTGSAYDLAIEGEGFFLVGTPNGERLTRAGAFSPSAEGLLVTPDGN 118

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
            PVLD    PI +P       + + G +S  G+ I  +G+         VR  +      
Sbjct: 119 -PVLDGGGAPIFVPPDATDLAIAQDGTLSTGGRPIGQIGVVRPVDELAMVREGSQLFDAT 177

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
               P+++     V +GF E SN +++ ++ +M+ + + +    +  +  ++ + +AI
Sbjct: 178 AGFEPVDN---PRVMQGFTEASNVDTVLQLARMVEVQRAYELGQSFSEREDERIRDAI 232


>gi|238923133|ref|YP_002936646.1| flagellar basal body and hook protein [Eubacterium rectale ATCC
           33656]
 gi|238874805|gb|ACR74512.1| flagellar basal body and hook protein [Eubacterium rectale ATCC
           33656]
          Length = 272

 Score =  154 bits (389), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 55/269 (20%), Positives = 97/269 (36%), Gaps = 30/269 (11%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--------- 51
           M  +         A +  + T+A+N+SN +T GF+  + +F  ++               
Sbjct: 1   MMRALYTAATGMRAEQTNVDTIANNLSNVNTTGFKGQRTEFKSLLYQTIQTRSTSGNGDA 60

Query: 52  ---IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFK 107
                Q            +   G   ST    DFALEGD +FA+  +      TR+G F 
Sbjct: 61  KPVGAQVGLGTRVAATTSTYTQGPLNSTERPTDFALEGDGFFAVRGTDNQTYYTRNGAFT 120

Query: 108 VTDDGS---LVSASGKYPVLDMASVPIQIP-----QKDEIFNVGEKGEISQKGKVIA--- 156
            +  G+   +++ S   PV+D     I +P     +K      G  G ++ +G  I    
Sbjct: 121 WSQYGNGQTILTDSQGNPVMDTNGNIIAVPAGVSAEKMSFGEDGAVGYMTAQGNYINLNQ 180

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIP------PTPLEDLSGVTVKRGFLEDSNANSMYEM 210
            + +Y  +   G  ++  S ++                L    V  G+LE SN     EM
Sbjct: 181 RIAVYQFNNPSGLEKQSGSLLAATANSGNPMLEIANPALKSSKVVTGYLEGSNVQVADEM 240

Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             +I   + +   +  I   +  +  A  
Sbjct: 241 VNLIVAQRAYELNSKAITTADSMLETANN 269


>gi|148554187|ref|YP_001261769.1| flagellar basal body rod protein FlgG [Sphingomonas wittichii RW1]
 gi|148499377|gb|ABQ67631.1| flagellar basal-body rod protein FlgG [Sphingomonas wittichii RW1]
          Length = 262

 Score =  154 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 46/258 (17%), Positives = 89/258 (34%), Gaps = 20/258 (7%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK-------- 55
           + ++      A   R+  +A+N++N +T GF+  +  F  +                   
Sbjct: 5   ALHVARTGLDAQNMRMQVIANNLANVNTTGFKRDRASFETLAYQAMTAPGAASSDSTKFA 64

Query: 56  -----ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVT 109
                 + V        +  G+   TG  LD A++GD +F +  P      TRDG F  +
Sbjct: 65  TGTNLGTGVQINGTAKIQTQGALQETGNPLDMAIQGDGYFQVLLPDGRTGYTRDGNFNRS 124

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQKGKVIATMGLYSVDMSQG 168
           DDG++V+A G +    +                    +        +  + L       G
Sbjct: 125 DDGTIVTADGYHLQPQIQIPENTTNLTIAADGTVSATQAGETTSTELGKIELARFSNPAG 184

Query: 169 FVRRENS-GISPNIPPTPLE----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223
                N+          P           T+++  LE SN N + E+  MI   + +   
Sbjct: 185 LQAEGNNILTETPASGQPQTGPGGIDGRGTIQQSSLESSNVNIVEELVDMIETQRAYEVN 244

Query: 224 TTLIDENEKSMLEAIRNI 241
           + +I   ++ +    +N+
Sbjct: 245 SKMISSTDQMLQYVNQNL 262


>gi|259417939|ref|ZP_05741858.1| flagellar basal-body rod protein FlgG [Silicibacter sp. TrichCH4B]
 gi|259346845|gb|EEW58659.1| flagellar basal-body rod protein FlgG [Silicibacter sp. TrichCH4B]
          Length = 261

 Score =  154 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 41/259 (15%), Positives = 97/259 (37%), Gaps = 21/259 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             +  I      A + R+ T+++N++N +T  +   + +F+++     +           
Sbjct: 1   MRALKIAATGMSAQQLRVETISNNLANMNTTAYNARRAEFADLHYQQISRAGTVNASDGT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q    V      +    G+   TG ELD A++G+ +F +  P      TRDG F
Sbjct: 61  VLPTGVQVGLGVRPAAVSVYLNQGALSQTGNELDVAIDGNGYFEVTLPSGETAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           K + +G +V+  G     ++                V      + + +++  + L     
Sbjct: 121 KRSAEGLIVTNDGYPVSPEITIPEDANSISINAEGEVYAYFNDTVEAELLGQLTLSGFTN 180

Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
            +G     ++                      T+++ +LEDS+ +++ E+ ++I   + +
Sbjct: 181 PKGLEAVGSNLFKQTEASGQPNTTEPGADGVGTLRQKYLEDSSVDAVREITELIEAQRGY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              + +I   ++ M    +
Sbjct: 241 EMNSKVISAVDQMMSATTQ 259


>gi|91976161|ref|YP_568820.1| flagellar basal body rod protein FlgG [Rhodopseudomonas palustris
           BisB5]
 gi|91682617|gb|ABE38919.1| Flagellar basal-body rod FlgG [Rhodopseudomonas palustris BisB5]
          Length = 262

 Score =  154 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 37/259 (14%), Positives = 88/259 (33%), Gaps = 21/259 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55
             +         A E  +  +++N++N  T G++     F +++      +  +      
Sbjct: 1   MRALYTAATGMAAQELNVQVISNNIANMRTTGYKKQTAAFQDLIYDHVRRVGAQASDQGT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                      V +         G+   TG +LD A+ G+ +F ++ P G    +RDG F
Sbjct: 61  ILPVGVDIGGGVKTVGTPRMMGQGTISPTGNDLDIAIRGEGFFKIQMPDGTFTYSRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
              + G +V+++G      +                V      S    ++  +GL     
Sbjct: 121 TTDNTGRIVTSNGNPVQPTITIPSGASGITINAQGQVTVNVPGSTTPVLLGQIGLTRFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G +   ++  +      P +D          +++  LE +N   + E+  +I   + +
Sbjct: 181 KTGLLPIGDNLFTETPASGPPQDGTANTDGFGDMQQKALEQANVEVVNEISDLIAAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
                ++   ++ +     
Sbjct: 241 EMNAKVVSAADQMLQSTSN 259


>gi|120613060|ref|YP_972738.1| Fis family transcriptional regulator [Acidovorax citrulli AAC00-1]
 gi|120591524|gb|ABM34964.1| transcriptional regulator, Fis family [Acidovorax citrulli AAC00-1]
          Length = 246

 Score =  154 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 53/244 (21%), Positives = 94/244 (38%), Gaps = 5/244 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       +    A  QR + +A+N++N  T GFR     F  V   ++ D  +   F  
Sbjct: 1   MDHIIYTSMTGASAAAQRQAVLANNLANASTNGFRAEMSTFRSV--PVQGDGSKTRVFAL 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119
                  +  G    TG  LD    G+AWFA++        TR+G F+V  +G L +++G
Sbjct: 59  EATSGHVETPGPVQRTGRNLDAMAVGNAWFAVQGLDGTEAYTRNGSFEVNAEGQLRTSNG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV--DMSQGFVRRENSGI 177
              + D        P  D              G+    +G   +     +  ++R +  +
Sbjct: 119 LTVLSDGGGPIDVPPGADVTLGSDGTLTARVAGQQATPIGRLKLATPTPEDPLKRGDDAL 178

Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                  P+ +     +  G LE SN N++  M  MI  +++F +   L+   E +   A
Sbjct: 179 FRTASGDPIPNDPNARLLSGALEGSNVNAVESMVGMIAASRQFEAQMRLLQTAETNDKTA 238

Query: 238 IRNI 241
            + +
Sbjct: 239 AQLL 242


>gi|291518270|emb|CBK73491.1| fagellar hook-basal body proteins [Butyrivibrio fibrisolvens 16/4]
          Length = 272

 Score =  154 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 37/269 (13%), Positives = 92/269 (34%), Gaps = 30/269 (11%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  S   G +     + ++ T+A+N++N +T+ +++   +F  ++               
Sbjct: 1   MVRSLWSGASGMKGQQVQVDTIANNLANVNTMAYKSQSAQFKTLLYQTLEAESTNAQGET 60

Query: 61  SGKEYL------------SKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                             +   G  ++  ++    + G+ +FA++       TR+G F  
Sbjct: 61  KPTSAQVGLGTRVASLNANFTQGPQMANDSKTAMCIIGEGFFAVQDGEETHYTRNGNFTW 120

Query: 109 ------------TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156
                       +D   ++  +G+   L   +  +      +  +   K +     +   
Sbjct: 121 AIGPTGDKVLTTSDGYQVLDQAGRPITLPRTAGELGFAVNIDDGSCSYKDQAGNIIRTGQ 180

Query: 157 TMGLYSVDMSQGF------VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEM 210
           ++ LY      G       +  E+      I       ++   + +G+LE SN N   EM
Sbjct: 181 SIALYQFTNRVGLNKIGENLYDESDASGEPISEWNTAGVTRSQIAQGYLEGSNVNVADEM 240

Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             +I   + +   +  I  ++  + +A  
Sbjct: 241 VNLIIAQRAYEMNSKAITTSDTMLEQANN 269


>gi|254462012|ref|ZP_05075428.1| flagellar basal-body rod protein FlgG [Rhodobacterales bacterium
           HTCC2083]
 gi|206678601|gb|EDZ43088.1| flagellar basal-body rod protein FlgG [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 261

 Score =  154 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 41/259 (15%), Positives = 98/259 (37%), Gaps = 21/259 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             +  I      A + R+  +++N++N  T G+ T + +F+++     +           
Sbjct: 1   MRALKIAATGMSAQQMRVEVISNNLANMSTTGYNTRRAEFADLHYQQMSRAGTINASDGT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q    V      +    GS  +T ++LD A++G  +  +  P      TRDG  
Sbjct: 61  VLPTGVQLGLGVRPSSVSVYLAQGSLSATNSDLDVAIDGQGYLKVTMPSGASAYTRDGAL 120

Query: 107 KVTDDGSLVSASGKY-PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           K   +G +V+  G       +     +    +    V      + + +++    L     
Sbjct: 121 KRNAEGLIVTNDGYPIVPEIVIPPEARSVSINGDGEVFAYFNETAQAQLLGQFTLAGFTN 180

Query: 166 SQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
           ++G     ++         P +          T+++G+LEDS+ +++ E+ ++I   + +
Sbjct: 181 AKGLEAIGSNLFMETEASGPSQVTTPGTDGLGTLRQGYLEDSSVDAVREVTELIEAQRGY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
                +I   ++ +  A +
Sbjct: 241 ELNAKVITAADQMLGAATQ 259


>gi|197104382|ref|YP_002129759.1| flagellar basal-body rod protein FlgF [Phenylobacterium zucineum
           HLK1]
 gi|196477802|gb|ACG77330.1| flagellar basal-body rod protein FlgF [Phenylobacterium zucineum
           HLK1]
          Length = 245

 Score =  154 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 58/244 (23%), Positives = 115/244 (47%), Gaps = 4/244 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFR-TIKVKFSEVVGAIKN-DIDQKISF 58
           M  +  +GL+ Q+ L + +  +A+N++N DT GF+    ++ ++           + + F
Sbjct: 1   MDNALYVGLSQQMVLRREMEIIANNIANLDTTGFKVESLMQKTDARAPAMTLGGPKPVKF 60

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSAS 118
           V +         G+   T  ELDFA+EG  +F L+ P G   TRDGRF+  + G LV+ +
Sbjct: 61  VTADGVARDFGQGALRRTDGELDFAIEGQGFFRLQGPDGERFTRDGRFRTDEIGRLVAQN 120

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178
           G  PV+D     I I  +    +V   G +SQ  + I  +G+++ +      +  ++   
Sbjct: 121 G-SPVMDEGGGEIVIDPEKGQVSVSADGVVSQGAERIGKIGMFTFETLAALEKTGDNQYR 179

Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
                 P +  +   +++G LE SN  ++ E+ +M+ +++ +     +ID        ++
Sbjct: 180 NTANLLP-QPAAEARLRQGMLEGSNVQAILEITRMVEVSRAYERTNRMIDSEADLSRRSV 238

Query: 239 RNIA 242
             + 
Sbjct: 239 ERLG 242


>gi|183220929|ref|YP_001838925.1| flagellar basal-body rod protein FlgG [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
 gi|189911025|ref|YP_001962580.1| endoflagellar distal basal body rod protein [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Ames)']
 gi|167775701|gb|ABZ94002.1| Endoflagellar distal basal body rod protein [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Ames)']
 gi|167779351|gb|ABZ97649.1| Flagellar basal-body rod protein FlgG (Distal rod protein)
           [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Paris)']
          Length = 286

 Score =  154 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 44/281 (15%), Positives = 98/281 (34%), Gaps = 44/281 (15%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKF------------SEVVGAI 48
           M      G    ++ + R+  VA+N++N D  GF+     F             + +G  
Sbjct: 1   MLRGLYTGANGMISQQVRMDVVANNLANVDKTGFKKDTTVFKTFPEMLLHRYSEDGIGKT 60

Query: 49  KND-------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA------WFALESP 95
                     + +        + Y   E G+   T    D  ++         +F + + 
Sbjct: 61  PMGSFDTSPVVGKLGFGAEVNEVYTRFEQGAVKKTDNIFDLMVQDQPGMEKPAFFTVLTN 120

Query: 96  RGIILTRDGRFKVTDDGSLVSASGKYPVLD-----MASVPIQIPQKDEIFNVGEKGEISQ 150
           +G  LTR G F +  +G +V+  G   + +     +      + +  EI+   + G   +
Sbjct: 121 QGERLTRSGSFVLDKNGFVVTPQGFPLLGEKGPIQVNQGNFLVKENGEIYINAKLGTAPK 180

Query: 151 KGK-----------VIATMGLYSVDMSQGFVRRENSGIS-PNIPPTPLEDLS--GVTVKR 196
            G            ++  + + +V+  +   +  +S  +       P          V +
Sbjct: 181 DGTNFSENRFEEPVLLDKLKIRTVENPRHLDKVGDSFYADTPESGEPTAFPELLAPQVLQ 240

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
           G+LE SN + + EM  MI + + + + +  +   +  +   
Sbjct: 241 GYLEASNVSVVTEMVDMIEVNRAYEANSKTMQTQDSLLGRL 281


>gi|291523980|emb|CBK89567.1| fagellar hook-basal body proteins [Eubacterium rectale DSM 17629]
          Length = 272

 Score =  154 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 55/269 (20%), Positives = 97/269 (36%), Gaps = 30/269 (11%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--------- 51
           M  +         A +  + T+A+N+SN +T GF+  + +F  ++               
Sbjct: 1   MMRALYTAATGMRAEQTNVDTIANNLSNVNTTGFKGQRTEFKSLLYQTIQTRSTSGNGDA 60

Query: 52  ---IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFK 107
                Q            +   G   ST    DFALEGD +FA+  +      TR+G F 
Sbjct: 61  KPVGAQVGLGTRVAATTSTYTQGPLNSTERPTDFALEGDGFFAVRGTDNQTYYTRNGAFT 120

Query: 108 VTDDGS---LVSASGKYPVLDMASVPIQIP-----QKDEIFNVGEKGEISQKGKVIA--- 156
            +  G+   +++ S   PV+D     I +P     +K      G  G ++ +G  I    
Sbjct: 121 WSQYGNGQTILTDSQGNPVMDTNGNIIAVPAGVSAEKMSFGEDGAVGYMTAQGNYINLNQ 180

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIP------PTPLEDLSGVTVKRGFLEDSNANSMYEM 210
            + +Y  +   G  ++  S ++                L    V  G+LE SN     EM
Sbjct: 181 RIAVYQFNNPSGLEKQSGSLLAATANSGNPMLEAANPALKSSKVVTGYLEGSNVQVADEM 240

Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             +I   + +   +  I   +  +  A  
Sbjct: 241 VNLIVAQRAYELNSKAITTADSMLETANN 269


>gi|94987182|ref|YP_595115.1| flagellar basal body rod protein [Lawsonia intracellularis
           PHE/MN1-00]
 gi|94731431|emb|CAJ54794.1| Flagellar basal body rod protein [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 264

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 66/262 (25%), Positives = 118/262 (45%), Gaps = 22/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-------- 52
           MQ +   GL A L+ E R++ +A+N++N +T G++  K+ F + +    +D         
Sbjct: 1   MQQAKFSGLFAALSAEHRMNFIANNLANVNTAGYKQDKLAFKDTMIQFAHDQIREPIATV 60

Query: 53  --------DQKISFVASGKEYLSKEVGSFISTGTELDFALEG-DAWFALESPRGIILTRD 103
                       + V           GS   TG  LDFA+ G + +F ++SP+G  LTR+
Sbjct: 61  RSKPLFPEPNNAARVRIAVSNTDFAQGSMQFTGNPLDFAITGENGFFRIQSPQGNYLTRN 120

Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
           G F +   G LV+  G   + D    PI IP+  +  ++   G I      + T+   S+
Sbjct: 121 GSFVLDATGQLVTKQGWPVLGD--GGPITIPEGTKKISITPDGRIFADDAEVGTIQFVSL 178

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGVT---VKRGFLEDSNANSMYEMGQMIHLTQKF 220
           D  +   +   +   P      +E  +  T   + +GFLE SN N + EM +MI + ++F
Sbjct: 179 DDVKKLEKVGANLYRPKEGLEIIEGNANETGAIINQGFLESSNVNVVEEMVKMIEVNRQF 238

Query: 221 NSITTLIDENEKSMLEAIRNIA 242
           ++   ++  ++    EA   + 
Sbjct: 239 DAYQKVMQTSDSLDREAYSKVG 260


>gi|23099019|ref|NP_692485.1| flagellar basal body rod protein FlgG [Oceanobacillus iheyensis
           HTE831]
 gi|22777247|dbj|BAC13520.1| flagellar hook-basal body protein [Oceanobacillus iheyensis HTE831]
          Length = 285

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 58/282 (20%), Positives = 103/282 (36%), Gaps = 43/282 (15%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++     + +L  + +N++N +TVG++   V F +++    +          
Sbjct: 1   MLRSMYSGISGMKNSQTKLDVIGNNIANVNTVGYKKSMVNFQDMMSQTTSGAQGSTANRG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF---------------ALE 93
                Q       G        G    T   LDFA+EGD  F                  
Sbjct: 61  GVNASQVGLGSTIGAISNIHTQGFQQVTNNPLDFAIEGDGMFVLVEGVDADGEGGTNIDL 120

Query: 94  SPRGIILTRDGRFKVTDDGSLVSASG----KYPVLDMASVPIQIPQKDEIFNVGEKGEIS 149
                  +R G F + D+G++V++ G     +         I IP+  + F+V   G ++
Sbjct: 121 DNVNTAYSRAGNFYLDDNGNIVNSQGLYLVGFVGDPAQESTINIPESAQSFSVQSNGTVN 180

Query: 150 Q-----KGKVIATMGLYSVDMSQGFVRRENSGISPNIPP-------TPLEDLSGVTVKRG 197
                   +V   + L S     G  +  N+    +          TP  D  G +V  G
Sbjct: 181 YIDANGDTQVAGQVALASFSNPSGLQKAGNNLYLDSPNAGLAEQLYTPESDDLGSSVVSG 240

Query: 198 FLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            LE SN +   E  +MI   + F + T +I  +++ + E + 
Sbjct: 241 ALEMSNVDLSEEFTEMITAQRSFQANTRIITTSDEILQELVN 282


>gi|304438314|ref|ZP_07398255.1| flagellar basal-body rod protein FlgG [Selenomonas sp. oral taxon
           149 str. 67H29BP]
 gi|304368680|gb|EFM22364.1| flagellar basal-body rod protein FlgG [Selenomonas sp. oral taxon
           149 str. 67H29BP]
          Length = 266

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 52/266 (19%), Positives = 106/266 (39%), Gaps = 27/266 (10%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51
           M     I  +  +   +    +A+N++N  T G++   +   +F  ++    ND      
Sbjct: 1   MWRGLYIAASGMITETKHTDMIANNLANAATTGYKRDDMAVREFEPMLLRRINDHAADTD 60

Query: 52  ---------------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR 96
                          +       A  +       G+  +TG   DF + G  +F +++P+
Sbjct: 61  VTSFKGFRIRSGAAIVGTLGLGSAVDEIATDHIQGALQTTGNTYDFGISGQGYFIIDTPQ 120

Query: 97  GIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156
           G   TRDG F  +  G L +  G+   L     PI IP       V   G I   G+ IA
Sbjct: 121 GQRYTRDGSFYRSSTGQLQNVRGQAV-LSPQGQPITIPADARNVTVSSDGRIYANGRQIA 179

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
            +G    D  +  ++  ++   P     P +  +   +++G LE SN + + EM ++I+ 
Sbjct: 180 QLGFVQFDEEKAVIKEGDNLYKPQPGAQPQQ--ATGVIEQGMLEMSNTSVVTEMVELINN 237

Query: 217 TQKFNSITTLIDENEKSMLEAIRNIA 242
            + + + +  +   +  + +A+ ++ 
Sbjct: 238 YRVYEAGSKAVQTQDALLDKAVNDVG 263


>gi|39936961|ref|NP_949237.1| flagellar basal body rod protein FlgG [Rhodopseudomonas palustris
           CGA009]
 gi|192292789|ref|YP_001993394.1| flagellar basal body rod protein FlgG [Rhodopseudomonas palustris
           TIE-1]
 gi|39650818|emb|CAE29341.1| putative flagellar basal-body rod protein flgg (distal rod protein)
           [Rhodopseudomonas palustris CGA009]
 gi|192286538|gb|ACF02919.1| flagellar basal-body rod protein FlgG [Rhodopseudomonas palustris
           TIE-1]
          Length = 262

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 41/259 (15%), Positives = 86/259 (33%), Gaps = 21/259 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55
             +         A E  +  +++N++N  T GF+    +F +++      +  +      
Sbjct: 1   MRALYTAATGMAAQELNVQVISNNIANMRTTGFKKQTAQFQDLIYDHVRRVGAQASDQGT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                      V +         G+   TG +LD A+ G+ +F ++ P G    TRDG F
Sbjct: 61  ILPVGVDIGGGVKTVGTPRLMTQGTLSPTGNDLDLAVRGEGFFKIQMPDGTFAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
              + G +V+A+G      +                V      S    VI  +GL     
Sbjct: 121 TKDNTGRMVTANGNPVQPTITVPNGATSITVAANGQVSVTISGSTTPTVIGQIGLTRFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   + ++           +D          + +  LE +N   + E+  +I   + +
Sbjct: 181 KAGLQPQGDNLFIETPASGTPQDGIASADGLGDIMQKTLEMANVEVVTEISDLISAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
                ++   ++ +     
Sbjct: 241 EMNAKVVSSADQMLQSTSN 259


>gi|269836597|ref|YP_003318825.1| hypothetical protein Sthe_0565 [Sphaerobacter thermophilus DSM
           20745]
 gi|269785860|gb|ACZ38003.1| protein of unknown function DUF1078 domain protein [Sphaerobacter
           thermophilus DSM 20745]
          Length = 259

 Score =  153 bits (387), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 43/256 (16%), Positives = 86/256 (33%), Gaps = 17/256 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA---------IKND 51
           M + +  G       + RL  VA+N++N  T GF+  +V   ++              + 
Sbjct: 1   MTSLYATGANGLRVQQARLDAVANNVANLGTTGFKAARVDMVDMPPQPLEVARAGGAADP 60

Query: 52  IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA--WFALESPRGIILTRDGRFKVT 109
           + +    V  G      E G+   TG  LD A+ G    +         + TRDG+F+  
Sbjct: 61  VTEIGEGVTIGGISRVFEPGTPRPTGNPLDVAILGPNTFFVLTTPDGQTLYTRDGQFRPD 120

Query: 110 DDGSLVSASGKYPVLD-MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
             G LV+ +G              + +      +            +  + L      QG
Sbjct: 121 STGQLVTPAGDRLSPPITLPPGASVTEVTPEGRILATLPGEVNPVEVGRITLARFANPQG 180

Query: 169 FVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223
                 +  +  +   P +  +        ++ G LE S  +   +M  +I   + +   
Sbjct: 181 LAAAGQNRFAATVASGPPQVGTPGADGFPALQSGALEASTVDLAEQMTTLIEAQRAYTVN 240

Query: 224 TTLIDENEKSMLEAIR 239
              +   ++ +  AI+
Sbjct: 241 ARALQTLDEMVGLAIQ 256


>gi|260762610|ref|ZP_05874944.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260673033|gb|EEX59854.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 2 str.
           86/8/59]
          Length = 243

 Score =  153 bits (387), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 45/243 (18%), Positives = 85/243 (34%), Gaps = 21/243 (8%)

Query: 21  TVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--------------ISFVASGKEYL 66
            +A+N++N +T GF+  + +F++++   +                       V +     
Sbjct: 1   MIANNIANINTTGFKRARAEFTDLLYQSERTAGVPNQANQAIVPEGALVGLGVQTAAVRN 60

Query: 67  SKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYPVLD 125
               GSF  TG   D AL G  WF ++SP    + TR G F    DG LV+  G      
Sbjct: 61  LHIQGSFNQTGNPYDVALTGRGWFQIQSPTGETLYTRAGAFNKNADGQLVTLDGNPVEPA 120

Query: 126 MASVPIQIPQKDEIFNVGE-KGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT 184
           +   P  I            K +       +  + L +     G      +         
Sbjct: 121 ITIPPDAIEVTITDTGQVFAKLQDQINQVDLGQLTLANFTNEAGLEPLGGNLYRETEASG 180

Query: 185 PLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
                        ++K+G+LE SN + + E+  +I   + +   + +I   ++      +
Sbjct: 181 GPLVGVPGDPGYGSIKQGYLEASNVDPVKEITDLITAQRAYEMNSKVIQAADEMAATVSK 240

Query: 240 NIA 242
           N+ 
Sbjct: 241 NLR 243


>gi|27381984|ref|NP_773513.1| flagellar basal body rod protein FlgG [Bradyrhizobium japonicum
           USDA 110]
 gi|27355154|dbj|BAC52138.1| flagellar basal-body rod protein [Bradyrhizobium japonicum USDA
           110]
          Length = 262

 Score =  153 bits (387), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 36/262 (13%), Positives = 83/262 (31%), Gaps = 21/262 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----------- 50
             S  I      A +  +  +A+N++N ++  ++  + +F+++   +             
Sbjct: 1   MKSLAIAATGMNAQQTNIEVIANNIANINSTSYKRARAEFTDLFYQMDRMQGVANVNGSS 60

Query: 51  ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
              +       V S         G+   TG   D A+ G  WF +  P   +  TR G F
Sbjct: 61  PIPEGANLGLGVKSAAIRKLHIQGALTQTGNPYDLAINGRGWFQVLGPNNEVQYTRAGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE-KGEISQKGKVIATMGLYSVDM 165
               +  LV+  G      +      +            K +     + I  + L +   
Sbjct: 121 NTNANSQLVTTDGYLLDPAITIPQGTVEVTVNQTGQVFAKLDTEVNPRQIGQLNLANFAN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++                       + + +LE SN + + E+ ++I   + +
Sbjct: 181 EAGLEPLGSNLYRETTASGTPVVGLPGDAGYGKINQKYLEASNVDPVKEITELISAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNIA 242
                +I  +++      + + 
Sbjct: 241 EMNAKVIQASDEMASTVSKGLR 262


>gi|330501139|ref|YP_004378008.1| flagellar basal-body rod protein FlgG [Pseudomonas mendocina NK-01]
 gi|328915425|gb|AEB56256.1| flagellar basal-body rod protein FlgG [Pseudomonas mendocina NK-01]
          Length = 261

 Score =  153 bits (387), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 47/260 (18%), Positives = 95/260 (36%), Gaps = 21/260 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M ++  +      A ++ +S VA+N++N +T GF++ +V F ++  AI+           
Sbjct: 1   MSSALWVSKTGLAAQDKAMSAVANNLANVNTNGFKSDRVVFEDLFYAIELQPGAQADEVN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  S V           GS  +TG  +D A+ G  +F +E+P   I  T +G+ 
Sbjct: 61  TVPSGIQLGSGVRVAGTQKVFTEGSIQTTGQPMDLAIIGAGFFQVEAPNGDIYYTENGQL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           ++  +G +V++ G      +                V            +  + L +   
Sbjct: 121 QLNAEGMIVNSQGLPLTPAIEVPAGSSRFTVGSDGIVTAVLAGDTLPSELGQITLVNFTN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +     +      +          +K+G LE SN   +  M  MI + + +
Sbjct: 181 PGGLEALGGNLYRETVASGEPVEGVPGADGLGNLKQGVLEGSNVQVVEAMVAMISIQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRN 240
            +   ++D     M + +  
Sbjct: 241 EANAKVLDAASG-MQQFLNQ 259


>gi|283780137|ref|YP_003370892.1| flagellar basal-body rod protein FlgG [Pirellula staleyi DSM 6068]
 gi|283438590|gb|ADB17032.1| flagellar basal-body rod protein FlgG [Pirellula staleyi DSM 6068]
          Length = 266

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 46/261 (17%), Positives = 95/261 (36%), Gaps = 24/261 (9%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--------- 55
                    +L+ +L  +A+N++N +T GF+  +  F ++    +     +         
Sbjct: 6   LYTAATGMESLQTKLDVIANNLANVNTTGFKRGRANFEDLFYRQEKLPGSQDQQQNLTAT 65

Query: 56  ----ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTD 110
                          +   G+F  TG +LD A+EG  +  ++ P G  + +R G   +  
Sbjct: 66  GTAIGLGSRVSSVQTNFNQGAFQETGGQLDVAIEGQGFLRVQDPSGITVYSRAGNLSINA 125

Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG----KVIATMGLYSVDMS 166
            G LV  S +   L   +V               +  + Q G    + IA + L +    
Sbjct: 126 QGQLVMGSAQTGRLIDPNVSFPQDTMAISITADGRVLVRQFGQQDLQQIAQIQLATFPNP 185

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFN 221
           +G ++   +  S           +        +++G LE SN   + E+  +I   + F 
Sbjct: 186 EGLLKLGENLYSQTDASGQEIVDNPGNQGIGVLRQGMLEASNVEPVQELIDLITTQRSFE 245

Query: 222 SITTLIDENEKSMLEAIRNIA 242
             +  I   ++ + + I N+ 
Sbjct: 246 LNSQAIQAGDQIL-QLISNLR 265


>gi|283784086|ref|YP_003363951.1| lateral flagellar rod protein [Citrobacter rodentium ICC168]
 gi|282947540|emb|CBG87093.1| lateral flagellar rod protein [Citrobacter rodentium ICC168]
          Length = 261

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 39/261 (14%), Positives = 86/261 (32%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  I      A +  +S +A+N++N +T GF+  +V F ++    +           
Sbjct: 1   MNAALWISKTGLSAQDAEMSAIANNIANVNTTGFKRDRVMFQDLFYQTQEAPGAMLDQNN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106
                 Q  S V       +   G+  +T   ++ A+ G  +  ++     I  TRDG  
Sbjct: 61  IMPTGMQFGSGVRIVGTQKTFTEGNVETTDNAMNVAIMGQGFLQVQKANGDIAYTRDGNL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165
           ++  DG L ++ G     ++                             +  + L +   
Sbjct: 121 QINADGVLTNSQGLPLQPEIDVPAGATSVAFGEDGTVTAILPGDSDPTELGQLTLVNFAN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++            +         T++   LE SN + + EM  MI + + +
Sbjct: 181 PAGLSAEGDNLYLETAASGQPTEGIPGEDGLGTLQGNALEGSNVDIVNEMVAMITVQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
                ++   +  +    + +
Sbjct: 241 EMNAKMVSAADDMLQFISQTL 261


>gi|316932823|ref|YP_004107805.1| flagellar basal-body rod protein FlgG [Rhodopseudomonas palustris
           DX-1]
 gi|315600537|gb|ADU43072.1| flagellar basal-body rod protein FlgG [Rhodopseudomonas palustris
           DX-1]
          Length = 262

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 85/259 (32%), Gaps = 21/259 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55
             +         A E  +  +++N++N  T GF+    +F +++      +  +      
Sbjct: 1   MRALYTAATGMAAQELNVQVISNNIANMRTTGFKKQTAQFQDLIYDHVRRVGAQASDQGT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                      V +         G+   TG +LD A+ G+ +F ++ P G    TRDG F
Sbjct: 61  ILPVGVDIGGGVKTVGTPRLMTQGTLSPTGNDLDMAVRGEGFFKIQMPDGTFAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
              + G +V+A G      +                V      S    V+  +GL     
Sbjct: 121 TTDNTGRIVTAGGNPVQPTITIPNGATSITVATNGQVSVTISGSTTPTVLGQIGLTRFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   + ++           +D          + +  LE +N   + E+  +I   + +
Sbjct: 181 KAGLQPQGDNLFVETPASGTPQDGIATADGLGDIMQKTLEQANVEVVTEISDLISAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
                ++   ++ +     
Sbjct: 241 EMNAKVVSAADQMLQSTAN 259


>gi|303248240|ref|ZP_07334503.1| flagellar basal-body rod protein FlgF [Desulfovibrio fructosovorans
           JJ]
 gi|302490378|gb|EFL50289.1| flagellar basal-body rod protein FlgF [Desulfovibrio fructosovorans
           JJ]
          Length = 261

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 49/258 (18%), Positives = 92/258 (35%), Gaps = 22/258 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF-- 58
           M+ S    +   L+ E RL+  A+N++N +T G++  +V F +      +D         
Sbjct: 1   MEMSMLSAVFGALSTELRLNLSANNLANVNTTGYKRDRVSFEDTFLRYAHDYHMDPRGNL 60

Query: 59  --------------VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDG 104
                             ++ +    G+   TG  LD A++G  +F + S      TR+G
Sbjct: 61  REKELLPRADLVATPRLAEQQIDFSQGALQLTGNPLDVAIQGQGFFKVASGGTTYYTRNG 120

Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
            F     G LV+      + +   V I         ++   G I   G  +  + +  V 
Sbjct: 121 AFHRDAQGMLVTDQNYPVIGNGGPVQI---PDGRDISIDGAGSIYVDGAQVGQIDVVRVQ 177

Query: 165 MSQGFVRRENSGISPNIPPTPLE---DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221
             +   +   +        T  E         V +G+LE  N   + EM  MI   + + 
Sbjct: 178 NPESLQKYGANLYMAQSGATVREGAVADGETRVAQGYLEKPNVQVVEEMVNMIETQRTYE 237

Query: 222 SITTLIDENEKSMLEAIR 239
           +   ++        ++IR
Sbjct: 238 AYQKVMTNTNDLDTKSIR 255


>gi|126730134|ref|ZP_01745946.1| flagellar basal-body rod protein FlgG [Sagittula stellata E-37]
 gi|126709514|gb|EBA08568.1| flagellar basal-body rod protein FlgG [Sagittula stellata E-37]
          Length = 261

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 96/259 (37%), Gaps = 21/259 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             +  I      A + R+  +++N+SN  T G+   + +F+++                 
Sbjct: 1   MRALKIAATGMSAQQMRVEVISNNLSNMSTTGYNARRAEFADLHYQQMARAGTVNASNGT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                 Q    V      +    G+  +TG +LD A+EG+ +  +  P G    TRDG  
Sbjct: 61  VLPTGIQLGLGVRPAAVSVQLSQGALSATGGDLDVAIEGNGYLEVTLPSGQAAYTRDGGL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           K T +G +V++ G     ++                V        + +++    L     
Sbjct: 121 KRTGEGLIVTSDGHPVAPEITIPDDARRISINADGEVYAYFAGQAQAQLLGQFTLAGFAN 180

Query: 166 SQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
           ++G     ++         P            T+++G+LEDS+ +++ E+  +I   + +
Sbjct: 181 AKGLEAIGSNLFVETEASGPAIQSTPGQDGLGTLRQGYLEDSSVDAVKEITDLIEAQRGY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              + +I   ++ +    +
Sbjct: 241 ELNSKVISAADQMLGATAQ 259


>gi|291528558|emb|CBK94144.1| fagellar hook-basal body proteins [Eubacterium rectale M104/1]
          Length = 272

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 55/269 (20%), Positives = 97/269 (36%), Gaps = 30/269 (11%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--------- 51
           M  +         A +  + T+A+N+SN +T GF+  + +F  ++               
Sbjct: 1   MMRALYTAATGMRAEQTNVDTIANNLSNVNTTGFKGQRTEFKSLLYQTIQTRSTSGNGDA 60

Query: 52  ---IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFK 107
                Q            +   G   ST    DFALEGD +FA+  +      TR+G F 
Sbjct: 61  KPVGAQVGLGTRVAATTSTYTQGPLNSTERPTDFALEGDGFFAVRGTDNQTYYTRNGAFT 120

Query: 108 VTDDGS---LVSASGKYPVLDMASVPIQIP-----QKDEIFNVGEKGEISQKGKVIA--- 156
            +  G+   +++ S   PV+D     I +P     +K      G  G ++ +G  I    
Sbjct: 121 WSQYGNGQTILTDSQGNPVMDTNGNIIAVPAGVSAEKMSFGEDGAVGYMTAQGNYINLNQ 180

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIP------PTPLEDLSGVTVKRGFLEDSNANSMYEM 210
            + +Y  +   G  ++  S ++                L    V  G+LE SN     EM
Sbjct: 181 RIAVYQFNNPSGLEKQSGSLLAATANSGNPMLEAANPALKNSKVVTGYLEGSNVQVADEM 240

Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             +I   + +   +  I   +  +  A  
Sbjct: 241 VNLIVAQRAYELNSKAITTADSMLETANN 269


>gi|238916189|ref|YP_002929706.1| flagellar basal-body rod protein FlgG [Eubacterium eligens ATCC
           27750]
 gi|238871549|gb|ACR71259.1| flagellar basal-body rod protein FlgG [Eubacterium eligens ATCC
           27750]
          Length = 256

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 62/256 (24%), Positives = 107/256 (41%), Gaps = 21/256 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTI---KVKFSEVVG---------AI 48
           M        +     ++RL  V++N++N  T G++        F +V G          I
Sbjct: 1   MVKGLYTAYSGLTVQQKRLDVVSNNLANATTTGYKKEGLTTQSFKDVYGIKVKDETVGYI 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-----PRGIILTRD 103
             +I         G+ + S + GSF +TG   DFAL G   F++           + TRD
Sbjct: 61  NQNIGTLNLGAKVGESFRSWDQGSFQNTGNTFDFALSGSGLFSISFTNKAGETSTLYTRD 120

Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
           G F++  +G LV+  G + +    + PIQ+P   E   V E GEI   G+ +  + L   
Sbjct: 121 GSFQMNREGYLVTKDGDFVLG--ENGPIQLPTDFESLTVEESGEIYADGQYVDRLALVDF 178

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223
           +          +        T  E  +   V +G+LE SN N + EM  MI + + F S 
Sbjct: 179 EDYDYVEAYGENLYKAVDGATQTE--ATAKVNQGYLEASNINVVTEMVDMISIARDFESN 236

Query: 224 TTLIDENEKSMLEAIR 239
             +++  ++ + + + 
Sbjct: 237 QKIMNTIDEMLGKMVS 252


>gi|254504490|ref|ZP_05116641.1| Flagella basal body rod protein [Labrenzia alexandrii DFL-11]
 gi|222440561|gb|EEE47240.1| Flagella basal body rod protein [Labrenzia alexandrii DFL-11]
          Length = 246

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 65/248 (26%), Positives = 121/248 (48%), Gaps = 12/248 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN-----DIDQK 55
           M+    IGL+ Q AL  +L  VA+NM+N +T GF++ ++ F E +  +         D+ 
Sbjct: 1   MENVHLIGLSRQSALRNQLDVVANNMANINTTGFKSQRLLFEEYLMPVAEATEFQTPDET 60

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSL 114
           +S+V   +     + G+F  TG +LD A+EG+ +F ++        TRDG F +  +G L
Sbjct: 61  LSYVLDYQSITDFDTGAFKMTGNDLDLAIEGEGFFVVQMGDGTEAYTRDGAFVIDQNGQL 120

Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174
           V++ G+  +      PI    +D    + + G IS +  +   + + S +  Q   ++ +
Sbjct: 121 VTSDGRPVM--TTGGPITFSAEDGSVEIAKDGTISTELGIRGVIRVASFEDPQELEKQGD 178

Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
           +      P  P        V +G LE SN   +Y++ Q+I +T+ + SIT ++ +     
Sbjct: 179 NLYRGENPGIPQRF----NVVQGALERSNVEGVYQVTQLIEVTRAYESITKMLKDVNDLR 234

Query: 235 LEAIRNIA 242
            +AI+ + 
Sbjct: 235 QQAIQVLG 242


>gi|296282277|ref|ZP_06860275.1| flagellar basal body rod protein FlgG [Citromicrobium bathyomarinum
           JL354]
          Length = 262

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 91/259 (35%), Gaps = 20/259 (7%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------- 55
           ++  +      A + R+  +A+N++N  T GF+  +  F+ +         QK       
Sbjct: 4   SALQVARTGLEAQDARMRVIANNLANVGTTGFKRDRANFATLAYQDARVAGQKSSGETAY 63

Query: 56  ------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKV 108
                  + VA          G+  +T    D AL+GD +F +  P      TR G F  
Sbjct: 64  ATGLNLGTGVAVQSTSQIMTAGTLDTTNNAFDLALDGDGFFQIAMPGGRTGYTRAGNFTR 123

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDMSQ 167
           + +G LV+  G     ++                V        +   +  + +       
Sbjct: 124 SAEGMLVTQQGFAVQPEITVPEGASAIAIAPDGTVSATINGESEPTELGQIQIARFTNPS 183

Query: 168 GFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222
           G     ++ ++        E     +     +++G LE SN N + E+  MI   + +  
Sbjct: 184 GLQAIGDNFLAETAASGAAELGIAGEGGRGQIRQGMLEGSNVNIVEELVAMIEAQRAYEI 243

Query: 223 ITTLIDENEKSMLEAIRNI 241
            + ++   ++ +  A + +
Sbjct: 244 SSKMVSAVDEMLRNANQTL 262


>gi|196249722|ref|ZP_03148418.1| flagellar basal body rod protein [Geobacillus sp. G11MC16]
 gi|196210598|gb|EDY05361.1| flagellar basal body rod protein [Geobacillus sp. G11MC16]
          Length = 295

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 55/276 (19%), Positives = 105/276 (38%), Gaps = 37/276 (13%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTI---KVKFSEVVG----------- 46
           M        +  LA ++R   + +N++N +T G++        F E++            
Sbjct: 20  MLRGLYTAASGMLAQQRRGDWLTNNLANAETPGYKADAGAMRAFPELLMSRLEDESIPSA 79

Query: 47  -----AIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFAL-------------EGDA 88
                  +  I    + V + +   +   G    TG   D AL              G  
Sbjct: 80  PPRAVPTQTAIGLLNTGVYTQELIPNFRQGDIKETGLSTDVALVDGQVPVDPTTGERGTL 139

Query: 89  WFALESPR-GIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGE 147
           +FA+E+ +     TR+G F ++ DG L +  G   +        +I    E F V + G 
Sbjct: 140 FFAVENGQGETRYTRNGHFTLSPDGYLTTQDGWNVL---DGNGERIAIPSESFTVRDDGT 196

Query: 148 ISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-TVKRGFLEDSNANS 206
           I+ + + IA +G+      +  V+  N        P P    +    VK+GF+E SN + 
Sbjct: 197 ITAENRTIARLGVVFAANPKTVVKEGNGLFRSTEGPLPQAPGNVTYMVKQGFIERSNVDI 256

Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
              M  ++   + F +   +I   ++S+ +A+  + 
Sbjct: 257 EQTMTDLLAAYRAFEANQKIIQAYDRSLDKAVNEVG 292


>gi|149203126|ref|ZP_01880097.1| hypothetical protein RTM1035_20326 [Roseovarius sp. TM1035]
 gi|149143672|gb|EDM31708.1| hypothetical protein RTM1035_20326 [Roseovarius sp. TM1035]
          Length = 237

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 64/241 (26%), Positives = 111/241 (46%), Gaps = 6/241 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M+++    L  Q  L + L  VA+N++N  T G+R   + FSE V   +      +S   
Sbjct: 1   MESAGYTTLTRQSGLLRELQVVANNIANAATTGYRQEGLIFSEFVKRTEG--GPSLSMAR 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
                 S   G    TG  LD A+EGD +F +E+P G  LTR G F ++  G LV+  G 
Sbjct: 59  GNVRMTSTLQGPLTPTGGMLDLAIEGDGFFLIETPAGERLTRAGSFTLSAQGDLVTPDGF 118

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
              LD    P+ IP       +   G +S  G+ +A +GL       G +R +      +
Sbjct: 119 RV-LDAGGAPVFIPPDASSIGLSPDGTLSDNGRPLAQIGLVRPIDRVGMIREDGVMFHAD 177

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
               P+E+     + +GFLE +N + + ++ +MI + + +    + +D   + +  A+ +
Sbjct: 178 GGFEPVEEG---VIHQGFLEGANVDPIGQVARMIEVQRAYEMGQSFLDTEHERVTSALDS 234

Query: 241 I 241
           +
Sbjct: 235 L 235


>gi|32477362|ref|NP_870356.1| flagellar hook basal body protein flgG [Rhodopirellula baltica SH
           1]
 gi|32447913|emb|CAD77433.1| flagellar hook basal body protein flgG [Rhodopirellula baltica SH
           1]
 gi|327537337|gb|EGF24070.1| flagellar basal-body rod protein FlgG [Rhodopirellula baltica WH47]
          Length = 268

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 95/259 (36%), Gaps = 24/259 (9%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID----------- 53
                    A++ +L  +A+N++N +T GF+  +  F +++   +               
Sbjct: 6   LYTAATGMEAMQTKLDVIANNLANINTTGFKKDRANFEDLLYRTEVYPGVQDSTQTPTAV 65

Query: 54  --QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP--RGIILTRDGRFKVT 109
             Q    V        +  G+   TG +LD A++G  +F +  P  +  + TR G   + 
Sbjct: 66  GTQVGLGVRVTSTQTDQRQGTLQQTGRDLDVAIQGGGYFRVVDPSSQDTMYTRAGNLDIN 125

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV----IATMGLYSVDM 165
            +G LV  S +   L    + I       + N   +  + Q G+        + L     
Sbjct: 126 ANGELVMGSAQVGRLLDPPITIPPDATAVVINSNGEVMVRQPGQTELTNQGQIQLAQFIN 185

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G ++   +  S      P +  +  T     +++G LE SN   + E+  +I   + F
Sbjct: 186 PDGLLKNGENLYSETDASGPEQINNPGTDGMGVLRQGNLEASNVEPVQELIDLITTQRAF 245

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  +   ++ M    +
Sbjct: 246 ELNSQAVQAGDQVMQNISQ 264


>gi|170755952|ref|YP_001782255.1| flagellar basal body rod protein FlgG [Clostridium botulinum B1
           str. Okra]
 gi|169121164|gb|ACA45000.1| flagellar basal body rod protein [Clostridium botulinum B1 str.
           Okra]
          Length = 255

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 53/258 (20%), Positives = 96/258 (37%), Gaps = 20/258 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKF---SEVVGAIKND------ 51
           M  S    ++  ++LE +  T++ N+SN  TVG+++  + F    +V+    +       
Sbjct: 1   MIRSLYTAVSGMISLEAKQDTISANLSNASTVGYKSTDLAFKKFEDVLMENYDKKLGNKN 60

Query: 52  ----IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107
               I          +       G    TG   DFALEG  +F +E+      TRDG F 
Sbjct: 61  IKNIIGGLSMGNKIDEVNNLFTQGIIQDTGKPTDFALEGRGFFTIENNGRNYYTRDGHFH 120

Query: 108 VTDDGSLVSASGKYPVL--DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           V   G LV+ SG   +           I    +       G IS  G    +  +   + 
Sbjct: 121 VDTRGYLVNDSGYNVMGINRNTGAREAIFVGSKTIGTDASGNISLNGVPSYSFQVADFND 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225
                +  ++    N P           V++  LE SN N   EM  M+   + F +   
Sbjct: 181 YNSLKKIGDNLFEGNNPQNIN-----GIVRQNSLEKSNVNVTNEMVNMLTTMRSFETNQK 235

Query: 226 LIDENEKSMLEAIRNIAS 243
           ++   ++++ + +  + +
Sbjct: 236 IVQSIDETLGKTVNEVGA 253


>gi|163744349|ref|ZP_02151709.1| flagellar basal-body rod protein FlgG [Oceanibulbus indolifex
           HEL-45]
 gi|161381167|gb|EDQ05576.1| flagellar basal-body rod protein FlgG [Oceanibulbus indolifex
           HEL-45]
          Length = 261

 Score =  153 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 96/262 (36%), Gaps = 22/262 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             + +I     +A +  +  +++N++N +T GF+  +  F +++                
Sbjct: 1   MKALSIAATGMMAQQTNVDVISNNIANANTTGFKASRAAFQDLIYQSMQREGALTSEAGS 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                      V +         G  ++T  +L+ A++G  +F++  P      TRDG F
Sbjct: 61  TRPVGIDIGMGVQTAGTVRLNTQGGMVATENQLNVAIDGRGYFSVTLPDGNQAFTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           +++ +G +V+  G      +         +      V    E   +   +    L +   
Sbjct: 121 QLSPEGEIVTMQGYRVEPGLVVPENTTAVEINEQGVVMAYVENDPEPVELGQFSLTTFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     N+ +         + ++        +++G+LE SN N + ++  +I   + +
Sbjct: 181 EPGMRPVGNNFLLATEASGEAQVVNPGDPGAGMIRQGYLEASNVNVIQQITDLISAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNIA 242
              +  I+  ++ +  A   I 
Sbjct: 241 EMNSKSIETADQML-SAANQIR 261


>gi|78044159|ref|YP_359861.1| flagellar hook-basal body rod protein [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|77996274|gb|ABB15173.1| flagellar hook-basal body rod protein [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 244

 Score =  153 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 53/246 (21%), Positives = 100/246 (40%), Gaps = 9/246 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSE-VVGAIKNDIDQKI 56
           M     I      A  ++L TVA+N++N +TVG+R        F E ++     ++ +  
Sbjct: 1   MLRGIYISATGLKAGLKQLDTVANNIANINTVGYRADITVNSGFEEKILNYAGKEVGKLE 60

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVS 116
             V     YL    G ++ TG  LDFAL G+ +F +E+P G+  TR G F+V  DG L  
Sbjct: 61  YGVNPDINYLDLSSGKYVPTGRNLDFALVGNGFFVVETPAGLRYTRAGDFQVNRDGYLCL 120

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
            +G   +      PI+I  ++       +    ++ + I  + +          +   + 
Sbjct: 121 PNGSRVLG--EKGPIKIDNEELYVEKDGRIYNKERSRYIDRLRVVEPVDPVALEKVGGNF 178

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                            V +G+LE SN +   E   ++   +   S    +   ++ + +
Sbjct: 179 FVTAAN---NVRPGNALVLQGYLEQSNVDPNREYPALLESLRYLQSNARGLKVQDELLSK 235

Query: 237 AIRNIA 242
           A+ ++ 
Sbjct: 236 AVNDLG 241


>gi|114799186|ref|YP_758987.1| flagellar basal body rod protein FlgG [Hyphomonas neptunium ATCC
           15444]
 gi|114739360|gb|ABI77485.1| flagellar basal-body rod protein FlgG [Hyphomonas neptunium ATCC
           15444]
          Length = 261

 Score =  153 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 97/259 (37%), Gaps = 21/259 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             S  I  +   A + R+  +++N++N  T  +R    +FS+++                
Sbjct: 1   MKSLQIAASGMAAQQMRVEVISNNIANMSTTAYRPRTAEFSDLMYQQYLTPGTITSQVGT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  S V      +    G+   T  ELD A++G+ +  +  P G    TRDG+ 
Sbjct: 61  VVPSGIQLGSGVRPTTVSMDLTQGTLRETQAELDIAIDGNGFLEVTLPSGEPAFTRDGKL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
             + DG +V++ G      +                V    +   +G+ I ++ L     
Sbjct: 121 SRSPDGEIVTSDGFPLADGIVIPEDARRISISRDGEVVAYFDNETEGQAIGSISLVRFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
            +G     ++         P   L   T     +++G++EDS  + + E+  +I   + +
Sbjct: 181 EKGLEAMGDNMFRETEASGPANRLIPGTEGMGFLRQGYIEDSAVDVVKEIADLIEAQRGY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              + +I  +++ +    R
Sbjct: 241 ELNSKVITASDEMLSVTTR 259


>gi|319650828|ref|ZP_08004965.1| flagellar basal-body rod protein [Bacillus sp. 2_A_57_CT2]
 gi|317397426|gb|EFV78127.1| flagellar basal-body rod protein [Bacillus sp. 2_A_57_CT2]
          Length = 279

 Score =  153 bits (385), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 54/279 (19%), Positives = 99/279 (35%), Gaps = 40/279 (14%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKND------ 51
           M   F    +  LA ++R   + +NM+N +T GF+  +     F E++            
Sbjct: 1   MFRGFYTAASGMLAQQRRTEVLTNNMANANTPGFKADQTSLRAFPEMLLQRIGQKTVPTE 60

Query: 52  ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFAL-------------EGDA 88
                     +    S V   +   S   G    TG   D AL              G  
Sbjct: 61  KGLNLPFNQEVGSLNSGVYMQETLPSFMQGDMKETGLNTDLALLDLNLPVNPDTGLSGSV 120

Query: 89  WFALE-SPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGE 147
           ++           TR+G F +  +G L +ASG Y + D      +I    + F V E G 
Sbjct: 121 FYTAAGIDGEQRYTRNGNFTLDGEGYLTTASGLYILDDAG---ERIQLSSDRFKVSEDGV 177

Query: 148 ISQKGKVIATMGLYSVDMSQGFVRRENSGISPN----IPPTPLEDLSGVTVKRGFLEDSN 203
           I+ +    A +G+      +   +  +   +      +            +++G+LE SN
Sbjct: 178 ITGEAGETARLGIMYAQNPESLRKEGDGLFAVTEESVLENAYNAQNVQFKLQQGYLERSN 237

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            ++   M  M+   + F +   ++   ++SM +A   I 
Sbjct: 238 VDASRTMTDMMTAYRSFEANQKVLQAYDRSMEKAANEIG 276


>gi|170021358|ref|YP_001726312.1| flagellar basal body rod protein FlgG [Escherichia coli ATCC 8739]
 gi|188494741|ref|ZP_03002011.1| flagellar basal-body rod protein FlgG [Escherichia coli 53638]
 gi|307136860|ref|ZP_07496216.1| flagellar basal body rod protein FlgG [Escherichia coli H736]
 gi|331640715|ref|ZP_08341862.1| flagellar basal-body rod protein FlgG [Escherichia coli H736]
 gi|331671806|ref|ZP_08372602.1| flagellar basal-body rod protein FlgG [Escherichia coli TA280]
 gi|169756286|gb|ACA78985.1| flagellar basal-body rod protein FlgG [Escherichia coli ATCC 8739]
 gi|188489940|gb|EDU65043.1| flagellar basal-body rod protein FlgG [Escherichia coli 53638]
 gi|315616825|gb|EFU97442.1| flagellar basal-body rod protein FlgG [Escherichia coli 3431]
 gi|323181549|gb|EFZ66969.1| flagellar basal-body rod protein FlgG [Escherichia coli 1357]
 gi|331040089|gb|EGI12297.1| flagellar basal-body rod protein FlgG [Escherichia coli H736]
 gi|331070795|gb|EGI42154.1| flagellar basal-body rod protein FlgG [Escherichia coli TA280]
          Length = 261

 Score =  153 bits (385), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 40/261 (15%), Positives = 86/261 (32%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  I      A +  +S +A+N++N +T GF+  +V F ++    +           
Sbjct: 1   MNAALWISKTGLSAQDAEMSAIANNIANVNTTGFKRDRVMFQDLFYQTQEAPGAMLDQNN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106
                 Q  S V       +   G+  +T   ++ A+ G  +  ++     I  TRDG  
Sbjct: 61  IMPTGLQFGSGVRIVGTQKTFTEGNVETTDNAMNVAIMGQGFLQVQKANGDIAYTRDGNL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165
           +V  DG L ++ G     ++                             +  + L +   
Sbjct: 121 QVNADGVLTNSQGLPLQPEIDVPAGATNVAFGEDGTVTAILPGDSDATELGQLTLVNFAN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++            +         T++   LE SN + + EM  MI + + +
Sbjct: 181 PAGLSAEGDNLYLETAASGQPTEGVPGEDGLGTLQDNALEGSNVDIVNEMVAMITVQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
                ++   +  +    + +
Sbjct: 241 EMNAKMVSAADDMLQYISQTL 261


>gi|320530444|ref|ZP_08031502.1| putative flagellar basal body rod protein FlgG [Selenomonas
           artemidis F0399]
 gi|320137277|gb|EFW29201.1| putative flagellar basal body rod protein FlgG [Selenomonas
           artemidis F0399]
          Length = 266

 Score =  153 bits (385), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 54/266 (20%), Positives = 107/266 (40%), Gaps = 27/266 (10%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51
           M     I  +  +   +    +A+N++N    GF+   +   +F  ++    ND      
Sbjct: 1   MWRGLYIAASGMITETKHTDMIANNLANASNTGFKRDDMAIREFEPMLLRRINDYTADTD 60

Query: 52  ---------------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR 96
                          +       A  +       G+  +TG   DFA+ G+ +F +++P+
Sbjct: 61  VTSFKGFRLGHGAPRVGMLGLGSAVDEIATDHLQGALQTTGNTYDFAISGEGYFVIDTPQ 120

Query: 97  GIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156
           G   TRDG F  +  G L +  G+   L     PI IP      NV   G I      IA
Sbjct: 121 GPRYTRDGSFYRSASGQLQNVRGQAV-LSAQGRPINIPADATRVNVSGDGRIYVGNTEIA 179

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
            +G    D     +++ ++   P     P +  +  T+++G LE SN + + EM ++I+ 
Sbjct: 180 QLGFVQFDAPDAVIKQGDNLYRPQEGARPTQ--ATGTIEQGLLEMSNTSIVTEMVELINN 237

Query: 217 TQKFNSITTLIDENEKSMLEAIRNIA 242
            + + + +  +   +  + +A+ ++ 
Sbjct: 238 YRVYEAGSRAVQTQDSLLDKAVNDVG 263


>gi|209963564|ref|YP_002296479.1| flagellar basal-body rod protein FlgF [Rhodospirillum centenum SW]
 gi|209957030|gb|ACI97666.1| flagellar basal-body rod protein FlgF [Rhodospirillum centenum SW]
          Length = 248

 Score =  153 bits (385), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 69/250 (27%), Positives = 113/250 (45%), Gaps = 14/250 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M+ S  + L+ Q+A+ + L   A+N++N +T  FR  +  F   V   K    QK++FV 
Sbjct: 1   MENSLYVALSQQMAVRRMLDVTANNVANMNTAAFRAERPVFDAFV--EKAGKGQKVAFVI 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
               Y     G+  STG  LD A+ GDAW ++ +P GI  TRDGR     DG LV+  G 
Sbjct: 59  DRATYTDTRDGTVASTGNPLDVAVRGDAWLSVATPDGIRYTRDGRLNRDPDGRLVTLDGY 118

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKG--------KVIATMGLYSVDMSQGFVRR 172
            PVLD     I +P+      +   G I            + +  +GL  +  +    R 
Sbjct: 119 -PVLDEGGGEITLPEDVGAIAITADGAIRAPAVDSENGEVEELGRLGLARLPAAGDLERD 177

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            +  +  +  P P E     T+ +G +E SN   + EM +++ LT+ +     +++   +
Sbjct: 178 GSGLVRYDGDPLPAEG---ATLIQGAVEGSNVQPITEMVRLVELTRAYGQANRMVESEHE 234

Query: 233 SMLEAIRNIA 242
               AI  + 
Sbjct: 235 RQKTAISKLG 244


>gi|150019059|ref|YP_001311313.1| flagellar basal body rod protein FlgG [Clostridium beijerinckii
           NCIMB 8052]
 gi|149905524|gb|ABR36357.1| flagellar basal body rod protein [Clostridium beijerinckii NCIMB
           8052]
          Length = 256

 Score =  153 bits (385), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 50/255 (19%), Positives = 108/255 (42%), Gaps = 14/255 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGA---------- 47
           M   F   ++  +AL+     V +N++N +  G++  ++    F +V+ +          
Sbjct: 1   MIRGFYTSVSGLIALQNDQEVVTNNIANVNNTGYKKRELTKSSFEDVMISNRQKLVGDKY 60

Query: 48  IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107
           +KNDI      V           G+F ST +  DFA++G  +F  ++    + TRDG FK
Sbjct: 61  VKNDIGNLNMGVKVNDVETVFTQGAFKSTDSMTDFAIDGRGFFVAQNGNKEVYTRDGNFK 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           + + G L++  G   +    S   + P           G+ +   + +  +        Q
Sbjct: 121 INNQGYLITNDGSQVLGINNSTGAREPIYVGDSKFSIDGDNNINIEGVGAVDKLLTADFQ 180

Query: 168 GFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
            +   E  G + +    P+   + V V++ FLE SN +   E+ +++ + ++F +    +
Sbjct: 181 NYNNLEPIGDNYSTMDNPI-YNAKVNVRQNFLESSNVDPSTELVKLMEIKRQFETNQKFV 239

Query: 228 DENEKSMLEAIRNIA 242
              ++++ +A   + 
Sbjct: 240 KMQDETVQKAASELG 254


>gi|170680582|ref|YP_001742375.1| flagellar basal body rod protein FlgG [Escherichia coli SMS-3-5]
 gi|256020230|ref|ZP_05434095.1| flagellar basal body rod protein FlgG [Shigella sp. D9]
 gi|260853468|ref|YP_003227359.1| putative lateral flagellar component of cell-distal portion of
           basal-body rod [Escherichia coli O26:H11 str. 11368]
 gi|293403357|ref|ZP_06647448.1| flgG [Escherichia coli FVEC1412]
 gi|293408369|ref|ZP_06652208.1| flagellar basal-body rod protein FlgG [Escherichia coli B354]
 gi|298378968|ref|ZP_06988849.1| flagellar basal-body rod protein FlgG [Escherichia coli FVEC1302]
 gi|300900357|ref|ZP_07118533.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 198-1]
 gi|300936128|ref|ZP_07151067.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 21-1]
 gi|306813301|ref|ZP_07447494.1| flagellar basal body rod protein FlgG [Escherichia coli NC101]
 gi|307313517|ref|ZP_07593138.1| flagellar basal-body rod protein FlgG [Escherichia coli W]
 gi|331645420|ref|ZP_08346524.1| flagellar basal-body rod protein FlgG [Escherichia coli M605]
 gi|332281392|ref|ZP_08393805.1| lateral flagellar rod protein [Shigella sp. D9]
 gi|59889782|emb|CAH19138.1| Lateral flagellar rod protein (FlgG-like) [Escherichia coli]
 gi|170518300|gb|ACB16478.1| lateral flagellar rod protein LfgG [Escherichia coli SMS-3-5]
 gi|257752117|dbj|BAI23619.1| predicted lateral flagellar component of cell-distal portion of
           basal-body rod [Escherichia coli O26:H11 str. 11368]
 gi|284920046|emb|CBG33103.1| lateral flagellar rod protein (FlgG-like) [Escherichia coli 042]
 gi|291429210|gb|EFF02230.1| flgG [Escherichia coli FVEC1412]
 gi|291471547|gb|EFF14030.1| flagellar basal-body rod protein FlgG [Escherichia coli B354]
 gi|298280081|gb|EFI21585.1| flagellar basal-body rod protein FlgG [Escherichia coli FVEC1302]
 gi|300356125|gb|EFJ71995.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 198-1]
 gi|300458706|gb|EFK22199.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 21-1]
 gi|305854064|gb|EFM54503.1| flagellar basal body rod protein FlgG [Escherichia coli NC101]
 gi|306906685|gb|EFN37196.1| flagellar basal-body rod protein FlgG [Escherichia coli W]
 gi|315059544|gb|ADT73871.1| flagellar component of cell-distal portion of basal-body rod
           [Escherichia coli W]
 gi|323158101|gb|EFZ44200.1| flagellar basal-body rod protein FlgG [Escherichia coli EPECa14]
 gi|323171066|gb|EFZ56715.1| flagellar basal-body rod protein FlgG [Escherichia coli LT-68]
 gi|323191540|gb|EFZ76801.1| flagellar basal-body rod protein FlgG [Escherichia coli RN587/1]
 gi|323379897|gb|ADX52165.1| flagellar basal-body rod protein FlgG [Escherichia coli KO11]
 gi|323975928|gb|EGB71022.1| flagellar basal-body rod protein FlgG [Escherichia coli TW10509]
 gi|327254556|gb|EGE66172.1| flagellar basal-body rod protein FlgG [Escherichia coli STEC_7v]
 gi|331045582|gb|EGI17708.1| flagellar basal-body rod protein FlgG [Escherichia coli M605]
 gi|332103744|gb|EGJ07090.1| lateral flagellar rod protein [Shigella sp. D9]
          Length = 261

 Score =  153 bits (385), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 40/261 (15%), Positives = 86/261 (32%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  I      A +  +S +A+N++N +T GF+  +V F ++    +           
Sbjct: 1   MNAALWISKTGLSAQDAEMSAIANNIANVNTTGFKRDRVMFQDLFYQTQEAPGAMLDQNN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106
                 Q  S V       +   G+  +T   ++ A+ G  +  ++     I  TRDG  
Sbjct: 61  IMPTGLQFGSGVRIVGTQKTFTEGNVETTDNAMNVAIMGQGFLQVQKANGDIAYTRDGNL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165
           +V  DG L ++ G     ++                             +  + L +   
Sbjct: 121 QVNADGVLTNSQGLPLQPEIDVPAGATNVAFGEDGTVTAILPGDSDVTELGQLTLVNFAN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++            +         T++   LE SN + + EM  MI + + +
Sbjct: 181 PAGLSAEGDNLYLETAASGQPTEGVPGEDGLGTLQDNALEGSNVDIVNEMVAMITVQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
                ++   +  +    + +
Sbjct: 241 EMNAKMVSAADDMLQYISQTL 261


>gi|260866415|ref|YP_003232817.1| putative lateral flagellar component of cell-distal portion of
           basal-body rod [Escherichia coli O111:H- str. 11128]
 gi|257762771|dbj|BAI34266.1| predicted lateral flagellar component of cell-distal portion of
           basal-body rod [Escherichia coli O111:H- str. 11128]
 gi|323178492|gb|EFZ64070.1| flagellar basal-body rod protein FlgG [Escherichia coli 1180]
          Length = 261

 Score =  153 bits (385), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 40/261 (15%), Positives = 85/261 (32%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  I      A +  +S +A+N++N +T GF+  +V F ++                
Sbjct: 1   MNAALWISKTGLSAQDAEMSAIANNIANVNTTGFKRDRVMFQDLFYQTLEAPGAMLDQNN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106
                 Q  S V       +   G+  +T   ++ A+ G  +  ++     I  TRDG  
Sbjct: 61  IMPTGLQFGSGVRIVGTQKTFTEGNVETTDNAMNVAIMGQGFLQVQKANGDIAYTRDGNL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165
           +V  DG L ++ G     ++                             +  + L +   
Sbjct: 121 QVNADGVLTNSQGLPLQPEIDVPAGATNVAFGEDGTVTAILPGDSDVTELGQLTLVNFAN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++            +         T++   LE SN + + EM  MI + + +
Sbjct: 181 PAGLSAEGDNLYLETAASGQPTEGVPGEDGLGTLQDNALEGSNVDIVNEMVAMITVQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
                ++   +  +    + +
Sbjct: 241 EMNAKMVSAADDMLQYISQTL 261


>gi|255523680|ref|ZP_05390646.1| flagellar basal body rod protein [Clostridium carboxidivorans P7]
 gi|255512549|gb|EET88823.1| flagellar basal body rod protein [Clostridium carboxidivorans P7]
          Length = 259

 Score =  153 bits (385), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 51/262 (19%), Positives = 94/262 (35%), Gaps = 24/262 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGA---------- 47
           M  S    ++  +  E +   + +N++N  TVGF+   +    F +V+            
Sbjct: 1   MIRSLYTAVSGMITQEAKQDVITNNLANATTVGFKGDNLAVKKFDDVLLQNYDKIVGGKN 60

Query: 48  IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG----IILTRD 103
           ++N I                  G+  ST    DFA++G  +FA++   G       TRD
Sbjct: 61  VRNVIGSISLGSKIDAVNTDFTQGNIESTDKATDFAIQGKGFFAVQRNNGVDNGQYYTRD 120

Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPI--QIPQKDEIFNVGEKGEISQKGKVIATMGLY 161
           G F V  +G LV+ SG   +           I            G +S        +   
Sbjct: 121 GHFHVNINGILVNDSGDTVLGRNLQNNSLGPINVGSGELKCDTSGNVSINNVPTYKLYTV 180

Query: 162 SVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221
             +      +  ++      P       +   V++  LE SN N + EM  M+   + F 
Sbjct: 181 DFNDYNTLKKVGDNLYQGTNPTE-----NAAVVRQKSLEKSNINVINEMVSMMTTMRTFE 235

Query: 222 SITTLIDENEKSMLEAIRNIAS 243
           +   ++   ++++ +A   I S
Sbjct: 236 TNQKVVQALDETLSKAANEIGS 257


>gi|225377358|ref|ZP_03754579.1| hypothetical protein ROSEINA2194_03006 [Roseburia inulinivorans DSM
           16841]
 gi|225210783|gb|EEG93137.1| hypothetical protein ROSEINA2194_03006 [Roseburia inulinivorans DSM
           16841]
          Length = 271

 Score =  153 bits (385), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 45/268 (16%), Positives = 95/268 (35%), Gaps = 29/268 (10%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--------- 51
           M  +     +   A +  +  +++N++N +T  F++ K +F  ++               
Sbjct: 1   MMRALYTAASGMRAQQTNVDNISNNIANVNTTAFKSQKTEFKSLLYQTIQTRTTSANGEE 60

Query: 52  ---IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFK 107
                Q            S   G+ +   ++  FA+EG+ +F +  +      TR+G F 
Sbjct: 61  KPIGAQVGLGTRVASNTTSYTQGALLEDESKSAFAIEGNGFFQVRGADGTTYYTRNGNFN 120

Query: 108 VT--DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA--------T 157
            +    G+ ++ +  YPVLD     I +P            +        A        T
Sbjct: 121 WSIGPTGTTLTNTDGYPVLDSNGNTIVLPNNVNSGKAVVTTDGQVGYYNNAGAYVSMNRT 180

Query: 158 MGLYSVDMSQGFVR------RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMG 211
           +GL   +   G  +      R  +     +      +L+   + +G+LE SN     EM 
Sbjct: 181 IGLSQFNNPAGLEKAGSNLLRATNASGAALNEATNANLTRSKIHQGYLEGSNVQVADEMV 240

Query: 212 QMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +I   + +   +  I  ++  + +A  
Sbjct: 241 NLIVAQRAYQLNSKAITTSDDMLEQANN 268


>gi|254421122|ref|ZP_05034846.1| flagellar basal-body rod protein FlgG [Brevundimonas sp. BAL3]
 gi|196187299|gb|EDX82275.1| flagellar basal-body rod protein FlgG [Brevundimonas sp. BAL3]
          Length = 262

 Score =  153 bits (385), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 41/259 (15%), Positives = 91/259 (35%), Gaps = 21/259 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             +     +   A +  +  +++N++N +TVGF+  + +F +++      +         
Sbjct: 1   MQALRTAASGMAAQQLNVEVISNNIANMNTVGFKKQRAEFQDLLYQNVERMGAQSSSQGT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                 Q  + V +G  Y   E G+   TG + D A++G  +F +  P G I  TR G  
Sbjct: 61  VVPTGIQIGAGVKAGAVYRVTEQGTPAQTGNDYDMAIDGKGYFQITLPSGEIGYTRAGNL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFN-VGEKGEISQKGKVIATMGLYSVDM 165
           +V  +G +V+  G      +                V            +  + L +   
Sbjct: 121 QVNQEGQIVTDDGYALQPAVTIPQDATDVTISKSGLVQVTQAGQTAPTTVGQIELATFFN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++ +                     + +G+ E SN +S+ E+  +I   + +
Sbjct: 181 EAGLEAIGDNLLLETAASGAANIGTPGSPGFGKILQGYTEASNVDSVAEISALIIAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              + +I   +  +    +
Sbjct: 241 EMNSKVISTADNMLSVTAQ 259


>gi|148380596|ref|YP_001255137.1| flagellar basal body rod protein [Clostridium botulinum A str. ATCC
           3502]
 gi|153932501|ref|YP_001384883.1| flagellar basal body rod protein FlgG [Clostridium botulinum A str.
           ATCC 19397]
 gi|153936688|ref|YP_001388352.1| flagellar basal body rod protein FlgG [Clostridium botulinum A str.
           Hall]
 gi|153938096|ref|YP_001391939.1| flagellar basal body rod protein FlgG [Clostridium botulinum F str.
           Langeland]
 gi|148290080|emb|CAL84199.1| putative flagellar basal-body rod protein [Clostridium botulinum A
           str. ATCC 3502]
 gi|152928545|gb|ABS34045.1| flagellar basal body rod protein [Clostridium botulinum A str. ATCC
           19397]
 gi|152932602|gb|ABS38101.1| flagellar basal body rod protein [Clostridium botulinum A str.
           Hall]
 gi|152933992|gb|ABS39490.1| flagellar basal body rod protein [Clostridium botulinum F str.
           Langeland]
 gi|295319959|gb|ADG00337.1| flagellar basal body rod protein [Clostridium botulinum F str.
           230613]
 gi|322806968|emb|CBZ04538.1| flagellar basal-body rod protein FlgF [Clostridium botulinum H04402
           065]
          Length = 255

 Score =  153 bits (385), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 53/258 (20%), Positives = 97/258 (37%), Gaps = 20/258 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKF---SEVVGAIKND------ 51
           M  S    ++  ++LE +  T++ N+SN  TVG+++  + F    +V+    +       
Sbjct: 1   MIRSLYTAVSGMISLEAKQDTISSNLSNASTVGYKSTNLAFKKFEDVLMENYDKKLGNKN 60

Query: 52  ----IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107
               I          +       G    TG   DFALEG  +F +E+      TRDG F 
Sbjct: 61  IKNIIGGLSMGNKIDEVNNLFTQGIIQDTGKPTDFALEGRGFFTIENNGRNYYTRDGHFH 120

Query: 108 VTDDGSLVSASGKYPVL--DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           V   G LV+ SG   +           I   ++       G IS  G    +  +   + 
Sbjct: 121 VDTRGYLVNDSGYNVMGINRNTGAREAIFVGNKTIGTDASGNISLNGVPSYSFQVADFND 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225
                +  ++    N P           V++  LE SN N   EM  M+   + F +   
Sbjct: 181 YNSLKKIGDNLFEGNNPQNIN-----GIVRQNSLEKSNVNVTNEMVNMLTTMRSFETNQK 235

Query: 226 LIDENEKSMLEAIRNIAS 243
           ++   ++++ + +  + +
Sbjct: 236 IVQSIDETLGKTVNEVGA 253


>gi|92116937|ref|YP_576666.1| flagellar basal body rod protein FlgF [Nitrobacter hamburgensis
           X14]
 gi|91799831|gb|ABE62206.1| flagellar basal body rod protein [Nitrobacter hamburgensis X14]
          Length = 255

 Score =  152 bits (384), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 59/252 (23%), Positives = 115/252 (45%), Gaps = 11/252 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN-----DIDQK 55
           M+ +  IGL+ Q+ LE+++  VA+N++N  T G++  +  F E +    +       D++
Sbjct: 1   MENTLLIGLSRQMMLERQMDVVANNVANVTTNGYKADRSLFEEYLMPGAHEDNFVGRDRR 60

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115
           +SFV     +     G    T   LD A++G A+  +++P G   TRDG  ++   G LV
Sbjct: 61  LSFVQDRATFHDFAGGPTEQTKNPLDVAIDGKAFLVVQTPAGERYTRDGGLQINAQGQLV 120

Query: 116 SASGKYPVLDM-----ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170
           +ASG   +              I   ++      +G  +    +   + L S   +Q  +
Sbjct: 121 TASGNPVLGSNGPITFQQTDHDITISNDGTVTVLEGVNNAADSIRGKLRLVSFAQAQKLL 180

Query: 171 RRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
           +  ++  S     +     +   V +GF+E SN N++ EM +M+ +++ +  + TL+ + 
Sbjct: 181 KEGSNLYSAGAGNSARP-DTSARVHQGFIEKSNVNAVTEMSRMVEVSRAYTQMATLLQQQ 239

Query: 231 EKSMLEAIRNIA 242
                 AI  +A
Sbjct: 240 SDLQRSAIEKLA 251


>gi|328543157|ref|YP_004303266.1| flagella basal body rod protein [polymorphum gilvum SL003B-26A1]
 gi|326412903|gb|ADZ69966.1| Flagella basal body rod protein [Polymorphum gilvum SL003B-26A1]
          Length = 245

 Score =  152 bits (384), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 69/248 (27%), Positives = 134/248 (54%), Gaps = 11/248 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN-----DIDQK 55
           M+ +  I L+ Q+ L ++L   A+NM+N +T GF+  ++ F E V  +         D K
Sbjct: 1   MENAQLISLSRQVTLRRQLDVAANNMANMNTSGFKAQRLTFEEYVMPVARASEFKGGDMK 60

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115
           +S+V   +   +   GS I TG  LD A++GD W A+++  G   TR+G   + + G+LV
Sbjct: 61  LSYVQDYQTITNFLSGSIILTGNPLDLAVDGDGWLAVQTEDGEAYTRNGALHLDNTGTLV 120

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
           +A G+  + D    PIQ  ++D   ++ + G IS +  +   + L + D  Q      N+
Sbjct: 121 TAEGRPVLTD--GGPIQFTREDGKIDISDDGTISTELGLRGRLRLVTFDQPQNARAIGNN 178

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
            +  + P    + ++ V V +G LE+SN   + E+ Q+I +T+K+ +++ L++++++ + 
Sbjct: 179 LLLYDDP----QPVTRVKVIQGGLENSNVQGVVEVTQIIDITRKYETVSKLLNQSDELLR 234

Query: 236 EAIRNIAS 243
           +AI  + +
Sbjct: 235 QAIERLGT 242


>gi|301645415|ref|ZP_07245356.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 146-1]
 gi|301076299|gb|EFK91105.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 146-1]
          Length = 261

 Score =  152 bits (384), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 40/261 (15%), Positives = 86/261 (32%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  I      A +  +S +A+N++N +T GF+  +V F ++    +           
Sbjct: 1   MNAALWISKTGLSAQDAEMSAIANNIANVNTTGFKRDRVMFQDLFYQTQEAPGAMLDQNN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106
                 Q  S V       +   G+  +T   ++ A+ G  +  ++     I  TRDG  
Sbjct: 61  IMPTGLQFGSGVRIVGTQKTFTEGNVETTDNAMNVAIMGQGFLQVQKANGDIAYTRDGNL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165
           +V  DG L ++ G     ++                             +  + L +   
Sbjct: 121 QVNADGVLTNSQGLPLQPEIDVPAGATNVAFGEDGTVTAILPGDSDATELGQLTLVNFAN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++            +         T++   LE SN + + EM  MI + + +
Sbjct: 181 PAGLSAEADNLYLETAASGQPTEGVPGEDGLGTLQDNALEGSNVDIVNEMVAMITVQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
                ++   +  +    + +
Sbjct: 241 EMNAKMVSAADDMLQYISQTL 261


>gi|146278639|ref|YP_001168798.1| flagellar basal body rod protein FlgG [Rhodobacter sphaeroides ATCC
           17025]
 gi|145556880|gb|ABP71493.1| flagellar basal-body rod protein FlgG [Rhodobacter sphaeroides ATCC
           17025]
          Length = 261

 Score =  152 bits (384), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 38/259 (14%), Positives = 90/259 (34%), Gaps = 21/259 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             +  I      A + R+  +++N++N  T G+   +  F+++                 
Sbjct: 1   MKALQIAATGMSAQQTRVDVISNNLANMSTTGYNPRRADFADLHYQQMVRPGTVSAEDGR 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q    V      +    G+   T  +LD A++G  +  +  P G    TRDG  
Sbjct: 61  MLPTGVQLGMGVRPSAVSVVLSQGALAQTRGDLDLAIDGRGYIEVTLPSGQSAYTRDGSL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDE-IFNVGEKGEISQKGKVIATMGLYSVDM 165
           K + +G +V++ G      +                V        + +++  + L     
Sbjct: 121 KRSGEGLVVTSDGHEVAPGITIPEDAASVAINGSGEVWAYFSGQVQPQLMGQITLSGFAN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
            +G     ++                      T+++G+LE+S+ +S+ E+ ++I   + +
Sbjct: 181 EKGLEAIGSNLFVETAASGAPIAGTPGEDGFGTLRQGYLEESSVDSVQEITELIKAQRGY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
                +I   ++ +    +
Sbjct: 241 ELNAKVITAADQMLAATAQ 259


>gi|302671949|ref|YP_003831909.1| flagellar basal-body rod protein FlgG1 [Butyrivibrio
           proteoclasticus B316]
 gi|302396422|gb|ADL35327.1| flagellar basal-body rod protein FlgG1 [Butyrivibrio
           proteoclasticus B316]
          Length = 276

 Score =  152 bits (384), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 44/271 (16%), Positives = 88/271 (32%), Gaps = 34/271 (12%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  S         A +  + T+++N++N +T G++    +F  ++      +    +   
Sbjct: 1   MVRSLWSAATGMNAQQTNVDTISNNLANVNTAGYKAQGAQFKSLLYQELQTVTTTANGAP 60

Query: 61  SGKEYL------------SKEVGSFISTGTELDFALEGDAWFALESPRGI--ILTRDGRF 106
                               + GSF++       A+ GD +F      G     TR+G F
Sbjct: 61  KPVTSQVGLGTRVASINQYFKQGSFLTNDNPAAMAISGDGFFGYLGSDGTSKYYTRNGNF 120

Query: 107 KV-----TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA----- 156
                       +++ +    V+D+    I +        +   G+        A     
Sbjct: 121 SWALSEAGGTTLVLTTAEGNKVMDINGAEITVDGNRVASRITIGGDGKIYYPDDAGVPQD 180

Query: 157 ---TMGLYSVDMSQGFVRRENSGISPN-------IPPTPLEDLSGVTVKRGFLEDSNANS 206
               +GL+     +G  R  +                T    +    + +G+LE SN N 
Sbjct: 181 LGKQIGLWQFPNREGLERIGSVAFQETPASGAAINENTAAAGIKKSEIVQGYLEGSNVNV 240

Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
             EM  +I   + +   +T I   ++ M  A
Sbjct: 241 ATEMVNLIVAQRAYEMNSTAIQTTDEMMQTA 271


>gi|86750896|ref|YP_487392.1| flagellar basal body rod protein FlgG [Rhodopseudomonas palustris
           HaA2]
 gi|86573924|gb|ABD08481.1| Flagellar basal-body rod FlgG [Rhodopseudomonas palustris HaA2]
          Length = 262

 Score =  152 bits (384), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 88/259 (33%), Gaps = 21/259 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55
             +         A E  +  +++N++N  T GF+    +F +++      +  +      
Sbjct: 1   MRALYTAATGMAAQELNVQVISNNIANMRTTGFKKQTAQFQDLIYDHVRRVGAQASDQGT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                      V +         G+  +TG +LD A+ G+ +F ++ P G    TRDG F
Sbjct: 61  ILPVGVDIGGGVKTVGTPRLMTQGTLSTTGNDLDLAIRGEGFFKIQMPDGTFSYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
              + G +V+A+G      +                V      +    V+  +GL     
Sbjct: 121 TTDNTGRIVTANGNPLQPTITIPNGATSITVATNGQVSVTVSGATAPTVLGQIGLTRFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   + ++         P +D          + +  LE +N   + E+  +I   + +
Sbjct: 181 KTGLQPQGDNLFIETQASGPPQDGIATADGLGDMMQKTLEQANVEVVTEISDLISAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
                ++   ++ +     
Sbjct: 241 EMNAKVVSAADQMLQSTSN 259


>gi|325111114|ref|YP_004272182.1| fagellar hook-basal body protein [Planctomyces brasiliensis DSM
           5305]
 gi|324971382|gb|ADY62160.1| fagellar hook-basal body protein [Planctomyces brasiliensis DSM
           5305]
          Length = 256

 Score =  152 bits (384), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 47/256 (18%), Positives = 92/256 (35%), Gaps = 16/256 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M                R   +++N++N +T  F+     F+      + D D       
Sbjct: 1   MLYGLYQSATGADLQSLRQDVISNNIANANTSSFKRDLAIFAVRPQQAELDGDLDDVPPP 60

Query: 54  --QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDD 111
                      +       G    TG   D AL G  +F +   +  +L+R G   + ++
Sbjct: 61  LQGHPGAAVVAETVTDFAQGPLQETGAAFDIALLGKGFFRVSDGQEELLSRSGSLTLNEN 120

Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE-----KGEISQKGKVIATMGLYSVDMS 166
             LV      PVLD    PI +P   +I    +        ++ +  V+  + L   +  
Sbjct: 121 SELVQTDTGLPVLDDKGDPIVVPPNTDINFGEDGLVTAVDRVTGQPFVLGRIDLVHPNNP 180

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
           +G  +  +S          +     + V++GFLE S    + EM  MI  ++ F +   L
Sbjct: 181 RGLEKVGDSLYR--AAEGVVTAGPELRVRQGFLEQSGVRPITEMLAMIESSRAFEANMNL 238

Query: 227 IDENEKSMLEAIRNIA 242
           I   + ++ + ++ + 
Sbjct: 239 IQNQDNTLGQLLQAVG 254


>gi|239828563|ref|YP_002951187.1| flagellar basal body rod protein [Geobacillus sp. WCH70]
 gi|239808856|gb|ACS25921.1| flagellar basal body rod protein [Geobacillus sp. WCH70]
          Length = 278

 Score =  152 bits (384), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 51/278 (18%), Positives = 95/278 (34%), Gaps = 39/278 (14%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVG----------- 46
           M   F    +  +A ++R+    +N++N +T G+++ +     F E++            
Sbjct: 1   MLRGFYTAASGMMAQQRRIEMWTNNIANANTPGYKSDQAALRAFPELLLSRLDKATVPTK 60

Query: 47  -----AIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA------------- 88
                 ++  I    + V   +   +   G    TG   D AL                 
Sbjct: 61  TPRSFPLQPTIGSINTGVYMQELIPNFRQGDIKETGQPTDIALINGTLPVDAETGKEGTL 120

Query: 89  -WFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGE 147
            +        I  TR+G F +   G L +  G Y +        +I      F V   G 
Sbjct: 121 FFIVQNENGDIRYTRNGNFTLNPQGFLTTNDGWYVL---DENGRRIQLPSTNFAVNADGT 177

Query: 148 ISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV---TVKRGFLEDSNA 204
           I      IA + +         V+  N          P    +     T+K+GFLE +N 
Sbjct: 178 IVANNTRIARINIAFAANPNTLVKEGNGLFRSENGVLPSALGNPNITYTLKQGFLERANV 237

Query: 205 NSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           +    M +M+   + F +   ++   ++SM +A+  I 
Sbjct: 238 DLNRAMTEMLSAYRAFEANQKIVQAYDRSMDKAVNEIG 275


>gi|212640499|ref|YP_002317019.1| flagellar basal body rod protein [Anoxybacillus flavithermus WK1]
 gi|212561979|gb|ACJ35034.1| Flagellar basal body rod protein [Anoxybacillus flavithermus WK1]
          Length = 262

 Score =  152 bits (384), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 55/265 (20%), Positives = 105/265 (39%), Gaps = 29/265 (10%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKND------ 51
           M        +  L+ ++R+  + +N++N +T G++  +     F E++            
Sbjct: 1   MFRGLYTAASGMLSQQRRIEMMTNNIANANTPGYKADQASLRAFPEMLMHRIQQTTIPTE 60

Query: 52  ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFAL---EGDAWFALESPRGI 98
                     I    + V   +   +   G    TG   D A+    G ++F +++  G 
Sbjct: 61  KKLTWRDRTYIGPLSTGVYVQELVPNFAQGDIRETGNNTDMAIVDGTGTSFFTVQNETGE 120

Query: 99  -ILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157
              TR+G F +  DG L +  G Y + +  +   +I   DE F V E G I++ G  IA 
Sbjct: 121 VRYTRNGHFTIDADGFLTTTDGLYVLDETGN---RIQVGDEQFTVLEDGTITKNGGQIAR 177

Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217
           + +   +  Q  ++  N          P E     T+++  +E SN +    M  M+   
Sbjct: 178 LRIAYAENVQTLMKEGNGLFRAEQQLPPAET---YTIRQQHIERSNVDLSRTMTDMLSAY 234

Query: 218 QKFNSITTLIDENEKSMLEAIRNIA 242
           + F +   ++   +KSM +A   I 
Sbjct: 235 RAFEANQKILQAYDKSMDKAANEIG 259


>gi|313894945|ref|ZP_07828504.1| fagellar hook-basal body protein [Selenomonas sp. oral taxon 137
           str. F0430]
 gi|312976398|gb|EFR41854.1| fagellar hook-basal body protein [Selenomonas sp. oral taxon 137
           str. F0430]
          Length = 266

 Score =  152 bits (384), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 54/266 (20%), Positives = 108/266 (40%), Gaps = 27/266 (10%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51
           M     I  +  +   +    +A+N++N    GF+   +   +F  ++    ND      
Sbjct: 1   MWRGLYIAASGMITETKHTDMIANNLANASNTGFKRDDMAIREFEPMLLRRINDYTADTD 60

Query: 52  ---------------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR 96
                          +       A  +       G+  +TG   DFA+ G+ +F +++P+
Sbjct: 61  VTSFKGFRLGHGAPRVGMLGLGSAVDEIATDHLQGALQTTGNTYDFAISGEGYFVIDTPQ 120

Query: 97  GIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156
           G   TRDG F  + +G L +  G+   L     PI IP      NV   G I      IA
Sbjct: 121 GPRYTRDGSFYRSANGQLQNVRGQAV-LSAQGRPINIPADATRVNVSGDGRIYVGNTEIA 179

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
            +G    D     +++ ++   P     P +  +  T+++G LE SN + + EM ++I+ 
Sbjct: 180 QLGFVQFDAPDAVIKQGDNLYRPQEGARPTQ--ATGTIEQGLLEMSNTSIVTEMVELINN 237

Query: 217 TQKFNSITTLIDENEKSMLEAIRNIA 242
            + + + +  +   +  + +A+ ++ 
Sbjct: 238 YRVYEAGSRAVQTQDSLLDKAVNDVG 263


>gi|75675314|ref|YP_317735.1| flagellar basal body rod protein FlgG [Nitrobacter winogradskyi
           Nb-255]
 gi|74420184|gb|ABA04383.1| Protein of unknown function DUF1078 [Nitrobacter winogradskyi
           Nb-255]
          Length = 262

 Score =  152 bits (384), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 40/258 (15%), Positives = 87/258 (33%), Gaps = 21/258 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55
             +         A E  +  +++N++N  T G++  +  F +++      +  +      
Sbjct: 1   MRALYTAATGMAAQELNVQVISNNIANLRTTGYKKQRAAFQDLIYDHVRRVGAQASTQGT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                      V +         G+   TG +LD A+ G+ +F ++ P G    TRDG F
Sbjct: 61  IMPVGIDLGGGVKTVGTPRQMSQGTLSQTGNDLDIAIRGEGFFKIQMPDGTFQYTRDGTF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165
           ++ + G +V+A G      +                            V+  +GL     
Sbjct: 121 QMDNMGRIVNAQGNPVQPTITIPQNSAGITINAQGQVSVTLPGQTTPTVLGQIGLTRFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++         P +D          +++  LE +N   + E+  +I   + +
Sbjct: 181 KAGLQPVGDNNFKETPASGPFQDGIANLDGFGDMQQSNLEQANVEVVSEISDLIAAQRAY 240

Query: 221 NSITTLIDENEKSMLEAI 238
                +I   ++ +  A 
Sbjct: 241 EMNAKVISAADQMLQSAA 258


>gi|262276416|ref|ZP_06054225.1| flagellar basal-body rod protein FlgF [Grimontia hollisae CIP
           101886]
 gi|262220224|gb|EEY71540.1| flagellar basal-body rod protein FlgF [Grimontia hollisae CIP
           101886]
          Length = 249

 Score =  152 bits (384), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 64/249 (25%), Positives = 103/249 (41%), Gaps = 12/249 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  + ++      Q L   A+N++N  T GFR    +   +      +      F  
Sbjct: 1   MDRALFLAMSGAKQDMQALQLRANNLANASTTGFRADLEQARSM--QAYGEGLPTRVFNM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           + +   S   GS I+TG ELD A++GD W A+         TR G  KV   G L +  G
Sbjct: 59  TERPGYSFAQGSTITTGRELDVAIKGDGWLAVLDGTGQEGYTRVGNLKVDQTGMLQNGHG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172
            + +L     PI +P       +G  G +S   +      +  VD        ++   + 
Sbjct: 119 -HLILGEGGAPIFLPLPVSKIEIGSDGTVSVLPQGAPPEAMEEVDRIKLVRPNNEELFKD 177

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
           +N    P  P T  E  +GV++  G LE SN N + EM  +I L + F     L+   E+
Sbjct: 178 KNGVFKPVNPGTIFEADAGVSLLTGALEGSNVNPINEMTGLIDLQRHFEMQVKLMKTAEE 237

Query: 233 SMLEAIRNI 241
            M +A  ++
Sbjct: 238 -MDQASNSL 245


>gi|118443708|ref|YP_877999.1| flagellar basal body rod protein FlgG [Clostridium novyi NT]
 gi|118134164|gb|ABK61208.1| flagellar basal-body rod protein FlgG [Clostridium novyi NT]
          Length = 266

 Score =  152 bits (384), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 54/268 (20%), Positives = 104/268 (38%), Gaps = 30/268 (11%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGA---------- 47
           M  S    ++  +  E +   +++N++N  TVG++   +    F +V+            
Sbjct: 1   MIRSIYTAVSGLINQEAQQDVISNNLANATTVGYKKDNLVGKSFKDVMMHNYDKVVGGKH 60

Query: 48  IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII------LT 101
           +KNDI          + Y +   G   ST    DFAL+G  +F +     +        T
Sbjct: 61  VKNDIGMLSMGSKLDQSYTNFTQGVLESTDKSTDFALQGRGFFVVSRNSRVAGGGQNFYT 120

Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQK-------DEIFNVGEKGEISQKGKV 154
           RDG F V   G LV++SG   +          P             +  ++GE+   G +
Sbjct: 121 RDGHFHVERTGYLVNSSGDRVMGQNMRTGAMEPIYLGNERTGPSKISCNDRGELFLDGSL 180

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMI 214
              + +   D  +   ++ ++              +G  VK+ +LE SN N M E+  M+
Sbjct: 181 KYKINVVDFDNYETLRKQGDNLY----SGGNPRAYNGAIVKQNYLEKSNVNVMEEVSDMM 236

Query: 215 HLTQKFNSITTLIDENEKSMLEAIRNIA 242
              + F S   L+   ++++ + +  + 
Sbjct: 237 MTMRNFESNQKLVQSLDETLGKTVNEVG 264


>gi|322435952|ref|YP_004218164.1| flagellar basal-body rod protein FlgG [Acidobacterium sp. MP5ACTX9]
 gi|321163679|gb|ADW69384.1| flagellar basal-body rod protein FlgG [Acidobacterium sp. MP5ACTX9]
          Length = 262

 Score =  152 bits (383), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 49/257 (19%), Positives = 100/257 (38%), Gaps = 20/257 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK----------- 49
           M  +     +   A +  L T+A+N++N+ T GFR+ +V+F +++               
Sbjct: 1   MIRALYTAASGMSAQQANLDTIANNLANSATAGFRSRRVQFEDMIYQNMITPGSPATQST 60

Query: 50  -NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFK 107
            +   Q      +    + +  G F  T   LD A++G  +F ++ P   I  TR+G F 
Sbjct: 61  VSAGLQIGLGTRTSATEIIQAQGDFNQTQNPLDLAIQGGGFFQIQQPDGTIAYTRNGSFH 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDMS 166
           + + G++++  G   +  +             + V             + T+ L +    
Sbjct: 121 LNNQGTIITTEGMSLIPSITIPSNATNVTISPYGVVSATLPGQTAAAQLGTLQLANFANP 180

Query: 167 QGFVRRENSGISPNIPP------TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
            G     NS  +           TP       T+++G+LE+SN + + E  QMI   + +
Sbjct: 181 GGLNSAGNSLFTQTTSSGNPVTDTPGGTSGVGTLEQGYLENSNVDVVTEFVQMILAQRAY 240

Query: 221 NSITTLIDENEKSMLEA 237
            S + ++   +    + 
Sbjct: 241 ESNSKVVHVADDMYQQI 257


>gi|126734106|ref|ZP_01749853.1| flagellar basal-body rod protein FlgF, putative [Roseobacter sp.
           CCS2]
 gi|126716972|gb|EBA13836.1| flagellar basal-body rod protein FlgF, putative [Roseobacter sp.
           CCS2]
          Length = 238

 Score =  152 bits (383), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 70/243 (28%), Positives = 110/243 (45%), Gaps = 5/243 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    L  Q  L   + T+A+N++N  T GFR   + F+E V  I  D        A
Sbjct: 1   MDNASYTALTRQSGLLNEMQTLANNIANASTTGFRAEGIIFAEHVKTIGPDAPSLSMATA 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           + +       G+   TG   D A+EGD +F +E+P G  LTR G F   ++G LV+A G 
Sbjct: 61  NVRNT-VMTQGALAQTGGTFDLAIEGDGFFLVETPGGPRLTRAGAFGPNENGDLVTADGY 119

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
              LD    P+ +PQ      +G  G IS  G+ I  +GL         VR    G    
Sbjct: 120 AV-LDAGGAPVFVPQGLGPVGIGPDGTISAGGQPIGQVGLVIPTDPLQMVRE---GSVMF 175

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
                 E      + +GFLE SN N + ++G+MI + + +    + +D+ ++ +   I+ 
Sbjct: 176 DARGGFEAAPDGRMLQGFLEGSNVNPILQIGRMIEVQRAYELGQSFLDKEDERIRSVIQA 235

Query: 241 IAS 243
           I +
Sbjct: 236 IRT 238


>gi|146341904|ref|YP_001206952.1| flagellar basal body rod protein FlgG [Bradyrhizobium sp. ORS278]
 gi|146194710|emb|CAL78735.1| Flagellar basal-body rod protein flgG (Distal rod protein)
           [Bradyrhizobium sp. ORS278]
          Length = 262

 Score =  152 bits (383), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 43/258 (16%), Positives = 90/258 (34%), Gaps = 21/258 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55
             + +       A E  +  +++N++N  T GF+     F +++      +  +      
Sbjct: 1   MQALHTAATGMAAQELNVQVISNNIANLRTTGFKKQTAAFQDLIYEHVRRVGAQSSDQGT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                      V +     S   G+   TG +LD A+ G+ +F +  P G    TRDG F
Sbjct: 61  ILPVGIDIGGGVKTVGTPRSMTQGTLSQTGNDLDLAISGEGFFKILMPDGTYQYTRDGTF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165
           ++ + G +V+A G      ++                      S    +I  + +     
Sbjct: 121 QMDNQGRIVTAQGNPVQPTISIPQNASGITVNSQGQVSVTLPGSTTSNIIGQLQVTRFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     N+  +        +D         ++ +G LE +N + + EM ++I   + +
Sbjct: 181 KAGLQPVGNNQFTDTPSSGAPQDGIANQDGLGSITQGSLEQANVDVVSEMSELIAAQRAY 240

Query: 221 NSITTLIDENEKSMLEAI 238
                +I   ++ M    
Sbjct: 241 EMNAKVISAADQMMQSTT 258


>gi|168182722|ref|ZP_02617386.1| flagellar basal body rod protein [Clostridium botulinum Bf]
 gi|237796078|ref|YP_002863630.1| flagellar basal body rod protein FlgG [Clostridium botulinum Ba4
           str. 657]
 gi|182674102|gb|EDT86063.1| flagellar basal body rod protein [Clostridium botulinum Bf]
 gi|229264182|gb|ACQ55215.1| flagellar basal body rod protein [Clostridium botulinum Ba4 str.
           657]
          Length = 255

 Score =  152 bits (383), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 53/258 (20%), Positives = 97/258 (37%), Gaps = 20/258 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKF---SEVVGAIKND------ 51
           M  S    ++  ++LE +  T++ N+SN  TVG+++  + F    +V+    +       
Sbjct: 1   MIRSLYTAVSGMISLEAKQDTISSNLSNASTVGYKSTNLAFKKFEDVLMENYDKKLGNKN 60

Query: 52  ----IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107
               I          +       G    TG   DFALEG  +F +E+      TRDG F 
Sbjct: 61  IKNIIGGLSMGNKIDEVNNLFTQGIIQDTGKPTDFALEGRGFFTIENNGRNYYTRDGHFH 120

Query: 108 VTDDGSLVSASGKYPVL--DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           V   G LV+ SG   +           I   ++       G IS  G    +  +   + 
Sbjct: 121 VDTRGYLVNDSGYNVMGINRNTGAREAIFVGNKTIGTDANGNISLNGVPSYSFQVADFND 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225
                +  ++    N P           V++  LE SN N   EM  M+   + F +   
Sbjct: 181 YNSLKKIGDNLFEGNNPQNIN-----GIVRQNSLEKSNVNVTNEMVNMLTTMRSFETNQK 235

Query: 226 LIDENEKSMLEAIRNIAS 243
           ++   ++++ + +  + +
Sbjct: 236 IVQSIDETLGKTVNEVGA 253


>gi|260574401|ref|ZP_05842405.1| flagellar basal-body rod protein FlgG [Rhodobacter sp. SW2]
 gi|259023297|gb|EEW26589.1| flagellar basal-body rod protein FlgG [Rhodobacter sp. SW2]
          Length = 261

 Score =  152 bits (383), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 41/259 (15%), Positives = 94/259 (36%), Gaps = 21/259 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             +  I  +   A + R+  V++N++N  T G+   +  F+++                 
Sbjct: 1   MNALQIAASGMAAQQMRVDVVSNNLANMSTTGYNARRADFADLHYQQLARPGTVSAQDGT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q    V      +    G+   TG +LD A+EG  +  +  P      TRDG  
Sbjct: 61  ILPTGVQLGLGVRPAAVSMVMAQGTLAQTGGDLDLAIEGQGYLEVTLPSGASAYTRDGAL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           K T DG +V++ G      +      +    +    V        +  ++  + L     
Sbjct: 121 KRTGDGLIVTSEGHQVAPGITIPADARSLSINADGEVYAYFVDQVQPSLLGQLNLVGFTN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
            +G     ++    +         +       T+++G+LE+S+ +++ E+ ++I   + +
Sbjct: 181 EKGLEAIGSNLFLESPASGAAIVGTPGQDGLGTLRQGYLEESSVDAVREVTELIKAQRGY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
                +I   ++ +    +
Sbjct: 241 ELNAKVITAADQMLSATTQ 259


>gi|331666548|ref|ZP_08367422.1| flagellar basal-body rod protein FlgG [Escherichia coli TA271]
 gi|331065772|gb|EGI37656.1| flagellar basal-body rod protein FlgG [Escherichia coli TA271]
          Length = 261

 Score =  152 bits (383), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 40/261 (15%), Positives = 85/261 (32%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  I      A +  +S +A+N++N +T GF+  +V F ++    +           
Sbjct: 1   MNAALWISKTGLSAQDAEMSAIANNIANVNTTGFKRDRVMFQDLFYQTQEAPGAMLDQNN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106
                 Q  S V       +   G+  +T   ++ A+ G  +  ++     I  TRDG  
Sbjct: 61  IMPTGLQFGSGVRIVGTQKTFTEGNVETTDNAMNVAIMGQGFLQVQKANGDIAYTRDGNL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165
           +V  DG L  + G     ++                             +  + L +   
Sbjct: 121 QVNADGVLTISQGLPLQPEIDVPAGATNVAFGEDGTVTAILPGDSDVTELGQLTLVNFAN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++            +         T++   LE SN + + EM  MI + + +
Sbjct: 181 PAGLSAEGDNLYLETAASGQPTEGVPGEDGLGTLQDNALEGSNVDIVNEMVAMITVQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
                ++   +  +    + +
Sbjct: 241 EMNAKMVSAADDMLQYISQTL 261


>gi|209884526|ref|YP_002288383.1| flagellar basal-body rod protein FlgG [Oligotropha carboxidovorans
           OM5]
 gi|209872722|gb|ACI92518.1| flagellar basal-body rod protein FlgG [Oligotropha carboxidovorans
           OM5]
          Length = 262

 Score =  152 bits (383), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 40/258 (15%), Positives = 86/258 (33%), Gaps = 21/258 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55
             +         A E  +  +++N++N  T G++     F +++      +  +      
Sbjct: 1   MRALYTAATGMAAQELSVQVISNNIANLRTTGYKKQMASFQDLLYEHVQRVGAQASDQGT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                      V +         G+ +  G +L+ A+ G+ +F ++ P      TRDG F
Sbjct: 61  VLPVGIDIGGGVKTVGTPRLMTQGTLLPVGGDLNIAVRGEGYFKIQLPDSTYAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165
                G +V+A G +    +A                      S    VI  +GL     
Sbjct: 121 TTDGQGRIVNAQGNFLQPTIAVPQNASQLTINAQGQVSVMLPGSTTPSVIGQIGLTRFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++  +      P +D          +++G LE +N   + E+  +I   + +
Sbjct: 181 KAGLQSIGDNLFTDTPASGPPQDGIANTDGFGDIQQGNLEQANVEVVSEISDLIAAQRAY 240

Query: 221 NSITTLIDENEKSMLEAI 238
                ++   ++ M    
Sbjct: 241 EMNAKVVSAADQMMQSTT 258


>gi|110677662|ref|YP_680669.1| flagellar basal body rod protein FlgF [Roseobacter denitrificans
           OCh 114]
 gi|109453778|gb|ABG29983.1| flagellar basal-body rod protein FlgF, putative [Roseobacter
           denitrificans OCh 114]
          Length = 237

 Score =  152 bits (383), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 69/241 (28%), Positives = 112/241 (46%), Gaps = 6/241 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M+ S    +  Q  L + +  VA+N++N  T GFR   V FSE V ++  D    +S   
Sbjct: 1   MENSGYTTITRQSGLMKEMRVVANNIANAATSGFRQEGVIFSEYVKSV--DGASSLSMGQ 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           +     S   G+   TG + DFA+EGD +F +E+P G  LTR G F    DG LV+  G 
Sbjct: 59  ADARQTSFAQGALTQTGGQFDFAIEGDGFFLVETPLGERLTRAGAFSPNADGDLVTPDGY 118

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
              LD    P+ IP       V   G IS  G  +  +GL      QG VR +      +
Sbjct: 119 RV-LDAGGAPVFIPPGAADIAVSADGTISTNGDPVGQLGLVQPRNPQGLVREDGVMFRAD 177

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
                 E      + + F+E+SN N + ++ +MI + + +    + ++  ++ + +A+R 
Sbjct: 178 EG---YEAAEQGRILQSFVENSNVNPILQLTRMIEVQRAYELGASFVEAEDERVRQAMRT 234

Query: 241 I 241
           +
Sbjct: 235 M 235


>gi|186477698|ref|YP_001859168.1| flagellar basal body rod protein FlgF [Burkholderia phymatum
           STM815]
 gi|184194157|gb|ACC72122.1| flagellar basal-body rod protein FlgF [Burkholderia phymatum
           STM815]
          Length = 252

 Score =  152 bits (383), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 58/245 (23%), Positives = 96/245 (39%), Gaps = 8/245 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI----DQKI 56
           M       ++      ++ + VA+N++NT T GF+     F  V  A  +      D   
Sbjct: 1   MDRLIYTAMSGATQALEQQAVVANNLANTSTTGFKAQLATFRAVPMAFGDGSTIQDDTTR 60

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLV 115
           +FV S         G    TG  LD A++G  W ++ +P      TR G   V ++G LV
Sbjct: 61  TFVLSSTPGADYTPGPIQQTGNPLDVAIQGPGWLSVLTPDGEEAYTRAGNLHVDENGQLV 120

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEK---GEISQKGKVIATMGLYSVDMSQGFVRR 172
           +A+    V     V +    +  I   G             +     L  V+ + G ++R
Sbjct: 121 TANNLPVVGGGGPVAVPPGAQVTIGKDGTVSALMPGDPATTIALVDQLKLVNPAPGALKR 180

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            + G+       P +    V V  G LE SN N +  M  MI   ++F   T +I+  ++
Sbjct: 181 GDDGLFHTNDGNPADADPAVVVAAGALEGSNVNPVSAMVSMITNARQFQMQTKMIESADQ 240

Query: 233 SMLEA 237
           +   A
Sbjct: 241 NEQSA 245


>gi|149173757|ref|ZP_01852386.1| flagellar hook basal body protein flgG [Planctomyces maris DSM
           8797]
 gi|148847287|gb|EDL61621.1| flagellar hook basal body protein flgG [Planctomyces maris DSM
           8797]
          Length = 266

 Score =  152 bits (383), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 91/259 (35%), Gaps = 22/259 (8%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID--------- 53
            +         A    L  +A+N++N+ T  ++  +  F ++                  
Sbjct: 4   RALYSSATGMAANSFNLDIIANNLANSSTTAYKQSRANFEDIFYENFKLPGVQDNQGNIT 63

Query: 54  ----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109
                              E GS + +    D A+ GD +F +      + TR G F + 
Sbjct: 64  PTGIALGIGTRVQSTEGDFEQGSILPSNGTYDLAIVGDGFFRVNDGTQDLYTRAGNFSLN 123

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG----KVIATMGLYSVDM 165
            +G+LV AS         ++ I     +   +        Q+G    +    + +     
Sbjct: 124 ANGNLVMASADKGYQLQPTISIPQDAINITISGDGVVSYQQQGSTQIQTAGNIQIARFIN 183

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
           +QG VR+ ++  +      P +     T     +++GFLE SN   + E+ ++I   + F
Sbjct: 184 NQGLVRQGDNLYTETTGSGPSQFGDPGTEGRGQLRQGFLEQSNVEPVRELVELIKTQRNF 243

Query: 221 NSITTLIDENEKSMLEAIR 239
              + ++   ++++     
Sbjct: 244 ELNSQVVQAADQTLQTVAN 262


>gi|226950050|ref|YP_002805141.1| flagellar basal body rod protein [Clostridium botulinum A2 str.
           Kyoto]
 gi|226841546|gb|ACO84212.1| flagellar basal body rod protein [Clostridium botulinum A2 str.
           Kyoto]
          Length = 263

 Score =  152 bits (383), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 54/270 (20%), Positives = 107/270 (39%), Gaps = 36/270 (13%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI----------KN 50
           M  +     +  +A + +L ++++N++N +TVG++   V F E+V             + 
Sbjct: 1   MLRALWNSKSGLIAQQNKLDSISNNLANVNTVGYKREDVSFQELVQETLKRKGYPTSDRP 60

Query: 51  DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVT 109
           +I       A+     + + G+ ++TG + D A++G  +F +    G     R G F + 
Sbjct: 61  EIQTGTGVKATNWIRDTHQQGALLTTGNKTDLAIDGQGFFRVIMADGDYAYERSGNFLID 120

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169
            +G LV  +G    +       Q+ Q + +  +   G        IA  G  SV  + G 
Sbjct: 121 RNGMLVDENGNALDI-------QLQQPEGVQILNRIGGFDANNINIAEDGSISVRDTDGL 173

Query: 170 VRRENSGISPNI-----------------PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQ 212
            +        N                      +   + V++ +GFLE+SN ++  EM +
Sbjct: 174 NKVVGKINIYNAVGADAFLSIGRNLYLPRDGVNVFVNNDVSILQGFLENSNVDAGKEMTE 233

Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           MI   + F   +  I   ++ M   + N+ 
Sbjct: 234 MIITQRAFELSSRGIKTADE-MWGIVNNMR 262


>gi|154249603|ref|YP_001410428.1| hypothetical protein Fnod_0921 [Fervidobacterium nodosum Rt17-B1]
 gi|154153539|gb|ABS60771.1| protein of unknown function DUF1078 domain protein
           [Fervidobacterium nodosum Rt17-B1]
          Length = 250

 Score =  152 bits (383), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 47/257 (18%), Positives = 94/257 (36%), Gaps = 23/257 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56
           M           L    ++ T+++N++N +T G++     F        + I  +     
Sbjct: 1   MYRGVYTAAMGMLVDITKIDTLSNNLANVETNGYKADTPTFKAYFNKEIDRIKPEPENRR 60

Query: 57  ----------SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106
                       V   +   +   G    T      A+ GD +FA+     I  TR+G F
Sbjct: 61  VEVKKIGNLEQAVILDEVRTNFSQGILEQTNVPSHIAINGDGFFAVRKANEIFYTRNGEF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
               +G LV+  G Y +        +I   +          +   G VI  + +Y++   
Sbjct: 121 IRDSNGRLVNTQGNYLL---NQNGQEIVVPETFSIDEAGNILDGNGNVIDRIAVYALSNP 177

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
           +       +G   N+P           +  G++E SN N + EM +MI   + + + +  
Sbjct: 178 RKIGDTLFAGQPQNLPED------SFRILPGYIEKSNVNVVREMVKMIEAHRHYEATSKA 231

Query: 227 IDENEKSMLEAIRNIAS 243
           I  +++ + + I N+ +
Sbjct: 232 IVVHDELLNKVINNVGA 248


>gi|115523557|ref|YP_780468.1| flagellar basal body rod protein FlgF [Rhodopseudomonas palustris
           BisA53]
 gi|115517504|gb|ABJ05488.1| flagellar basal body rod protein [Rhodopseudomonas palustris
           BisA53]
          Length = 254

 Score =  152 bits (383), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 60/251 (23%), Positives = 119/251 (47%), Gaps = 10/251 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN-----DIDQK 55
           M+ +  IGL+ Q+ LE+++  VA+N++N +T GF+  +  F E +    +       D++
Sbjct: 1   MENAQLIGLSRQVTLERQMDVVANNVANMNTTGFKAERTLFEEYLSPRAHEDNFVGRDRR 60

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115
           +S+V     +     G    T   LD A++G+A+  +++P G   TRDG  ++   G LV
Sbjct: 61  VSYVQDRATFHDFSSGPLEQTKNPLDVAIDGEAFLVVQTPAGERYTRDGSLQINSQGQLV 120

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI----ATMGLYSVDMSQGFVR 171
           +ASG   +     +  Q   KD          + +    +      + L +   +Q  V+
Sbjct: 121 TASGYQVLGTNGPIVFQSTDKDINIAADGNVSVLEGTATVDSLRGKLRLVNFANAQQLVK 180

Query: 172 RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
             ++  S        +  +   V++GF+E SN NS+ EM +MI +T+ +  ++ ++ +  
Sbjct: 181 EGSNLYSAAGGAA-AQQDTKAQVRQGFIEKSNVNSVMEMTRMIDVTRAYTQLSAMLQQQG 239

Query: 232 KSMLEAIRNIA 242
           +    A+  +A
Sbjct: 240 ELRRTALEKLA 250


>gi|89056685|ref|YP_512136.1| flagellar basal body rod protein FlgF [Jannaschia sp. CCS1]
 gi|88866234|gb|ABD57111.1| flagellar basal-body rod protein FlgF [Jannaschia sp. CCS1]
          Length = 240

 Score =  152 bits (383), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 63/242 (26%), Positives = 111/242 (45%), Gaps = 5/242 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       L     L + ++ VA+N++N  T GFRT  + F+E + A  ND        A
Sbjct: 1   MDNPGYASLTRLSGLMREMAVVANNIANISTTGFRTEGLVFAEHIAATGNDSPSLSMGAA 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
            G+   +++     +   E D A+EG+ +F + +P G +L+R G F   D G LV+  G 
Sbjct: 61  IGRSISAQQGALEQTAS-EFDLAIEGEGFFLIGTPDGEVLSRAGAFIRNDAGELVTPDGY 119

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
           Y  LD    PI +P +     V   G IS  G+ +  +GLY  +      RR  +  +  
Sbjct: 120 YL-LDAGGAPIFVPPQAGSVAVSSDGTISADGQPLTVVGLYLPNDPLELSRRSGTAFTVE 178

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
               P ++     + +GFLE SN + + ++ +MI + + +    + +D  +  + + +R 
Sbjct: 179 SGVQPADN---ARILQGFLEQSNVDPVAQIARMIEVQRAYELGQSFMDAEDNRIRDFLRT 235

Query: 241 IA 242
             
Sbjct: 236 AG 237


>gi|310816831|ref|YP_003964795.1| flagellar basal-body rod protein FlgG [Ketogulonicigenium vulgare
           Y25]
 gi|308755566|gb|ADO43495.1| flagellar basal-body rod protein FlgG [Ketogulonicigenium vulgare
           Y25]
          Length = 261

 Score =  151 bits (382), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 94/259 (36%), Gaps = 21/259 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
               +I     LA + R+  +++N++N +T  +   + +F+++                 
Sbjct: 1   MRILDIAATGMLAQQTRVEVISNNLANMNTTAYNPRRAEFADLHYQQVQRAGTVAATDGT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q    V +         G+   TG  LD A+EG  +F +  P   I  TRDG  
Sbjct: 61  ILPTGIQLGMGVRTTAVSPMLGQGAVQETGGSLDVAIEGQGYFEVALPDGRIGYTRDGAL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
           K+T DG +V+A G      +                V      + + + +  + L     
Sbjct: 121 KLTGDGLIVTAGGLEVAPGIVIPEDAQSVAINADGEVYASFTNAVEQEFLGQLNLAMFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
            +G     ++                 +    T+++G+LE S  +++ E+  +I   + +
Sbjct: 181 PRGLEAMGSNLYLETAASGQPMVAVPGEDGLGTLRQGYLEQSTVDAVREVTDLIAAQRGY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              + +I   ++ +   ++
Sbjct: 241 ELNSKVISAADQMLAAMVQ 259


>gi|326319098|ref|YP_004236770.1| flagellar basal-body rod protein FlgF [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|323375934|gb|ADX48203.1| flagellar basal-body rod protein FlgF [Acidovorax avenae subsp.
           avenae ATCC 19860]
          Length = 246

 Score =  151 bits (382), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 53/244 (21%), Positives = 94/244 (38%), Gaps = 5/244 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       +    A  QR + +A+N++N  T GFR     F  V   ++ D  +   F  
Sbjct: 1   MDHIIYTSMTGASAAAQRQAVLANNLANASTNGFRAEMSTFRSV--PVQGDGSKTRVFAL 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119
                  +  G    TG  LD    G+AWFA++        TR+G F+V  +G L +++G
Sbjct: 59  EATSGHVETPGPVQRTGRNLDAMAVGNAWFAVQGLDGTEAYTRNGSFEVNAEGQLRTSNG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV--DMSQGFVRRENSGI 177
              + D        P  D              G+    +G   +     +  ++R +  +
Sbjct: 119 LTVLSDGGGPIDVPPGADVTLGSDGTITARVAGQQPTPIGRLKLATPTPEDPLKRGDDAL 178

Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                  P+ +     +  G LE SN N++  M  MI  +++F +   L+   E +   A
Sbjct: 179 FRTASGDPMPNDPNARLLSGALEGSNVNAVESMVGMIAASRQFEAQMRLLQTTENNDKTA 238

Query: 238 IRNI 241
            + +
Sbjct: 239 AQLL 242


>gi|54308098|ref|YP_129118.1| flagellar basal body rod protein FlgF [Photobacterium profundum
           SS9]
 gi|46912524|emb|CAG19316.1| putative flagellar basal-body rod protein FlgF [Photobacterium
           profundum SS9]
          Length = 249

 Score =  151 bits (382), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 59/243 (24%), Positives = 98/243 (40%), Gaps = 11/243 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  + ++        + T A+N++N  T GFR    +   +      +      F  
Sbjct: 1   MDRALYLAMSGAKQDMYGMQTHANNLANVRTTGFRADLEQARSM--QAYGEGLPSRVFAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           + +       GS ++TG +LD A+EGD W A+         TR G  K+ + G L +++G
Sbjct: 59  TERPGQDFSQGSVMTTGRDLDVAIEGDGWLAVLDASGQEAYTRAGHLKIDETGMLQNSNG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172
              +L     PI IP       VG  G IS   +      +  VD        ++   + 
Sbjct: 119 N-LMLGENGGPIFIPLPISKIQVGNDGTISVLPQGAPPEAMEIVDRLKLVRPDNRDLFKD 177

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            N       P    +  +GVT+ +G LE SN N++ EM  MI L + F     ++   E+
Sbjct: 178 VNGLFKSKTPGVIYDADAGVTLLKGALEGSNVNAVGEMTSMIDLQRHFEMQVKIMKTAEE 237

Query: 233 SML 235
              
Sbjct: 238 MDQ 240


>gi|330809230|ref|YP_004353692.1| flagellar basal-body rod protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327377338|gb|AEA68688.1| Flagellar basal-body rod protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 257

 Score =  151 bits (382), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 46/257 (17%), Positives = 101/257 (39%), Gaps = 16/257 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS--- 57
           M  S +I  +   A +  + ++++N++N  T+G++  +V F ++V  +    D       
Sbjct: 1   MIDSLSIASSGLTANQAWIDSISNNVANMQTIGYKRSQVDFHDMVREVGTRDDGGGMTES 60

Query: 58  -----FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDD 111
                 + + +       G+   +G  LD A++GD +F +  P G    TR GRF +  +
Sbjct: 61  LLTGAGIQASQPSQVFSPGTVRESGNALDLAIQGDGFFEVALPTGELAYTRAGRFHLDSE 120

Query: 112 GSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170
           G L    G+    D+   P  +     +   V      + +   +  + L     ++   
Sbjct: 121 GQLAMPDGQTLTADLRVPPDARNLVIKQNGEVQATITETGEIINVGQVQLAKFASAEALT 180

Query: 171 RRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225
           +  +    P                   + +G++E SN N + EM  ++   + +     
Sbjct: 181 KLSDGLYRPTQASGEAIYAEPGRDGQGVLLQGYVEMSNVNLIDEMSGLVLAQRAYQMNAR 240

Query: 226 LIDENEKSMLEAIRNIA 242
           L+  +++ + E I N+ 
Sbjct: 241 LLQASDQIL-ETINNLR 256


>gi|152980353|ref|YP_001353112.1| FlgF flagellar basal body rod protein [Janthinobacterium sp.
           Marseille]
 gi|151280430|gb|ABR88840.1| FlgF flagellar basal body rod protein [Janthinobacterium sp.
           Marseille]
          Length = 246

 Score =  151 bits (382), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 56/246 (22%), Positives = 95/246 (38%), Gaps = 6/246 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       ++    + ++ ST A N++N  T GFR     F  V   + ++     +FV 
Sbjct: 1   MDRLIYTAMSGAKQIMEQQSTTAHNLANVSTTGFRAQMDTFRAV--PVVSNGLPTRTFVV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
                     G    TG  LD A++G  W A+E        TR G  K+ ++G L +  G
Sbjct: 59  DSTIGTDFRAGPIQQTGRTLDLAVQGPGWLAVERADGTEGYTRSGSLKINENGVLQTEGG 118

Query: 120 KYPVLDMAS---VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
              + D       P       +   +      +  G  I    L  V+   G + R + G
Sbjct: 119 LNVLADGGPITIPPNVKISFAKDGTISSVDSGNVPGATIEIARLKLVNPDVGNLERSSDG 178

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           I       P +  + V V  G +E SN N +  M  MI L ++F     ++ + + +  +
Sbjct: 179 IFITKDRLPADVDANVGVISGAIEGSNVNVVDAMVNMISLARQFELNMKMLKDADSNAAK 238

Query: 237 AIRNIA 242
           A + +A
Sbjct: 239 ADQFLA 244


>gi|269792758|ref|YP_003317662.1| hypothetical protein Taci_1148 [Thermanaerovibrio acidaminovorans
           DSM 6589]
 gi|269100393|gb|ACZ19380.1| protein of unknown function DUF1078 domain protein
           [Thermanaerovibrio acidaminovorans DSM 6589]
          Length = 263

 Score =  151 bits (382), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 53/263 (20%), Positives = 99/263 (37%), Gaps = 24/263 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M      G +A L  E+ L  V +N++N DT GFR            + + I++ +  V 
Sbjct: 1   MFRGIYAGTSAMLVQEKMLDVVGNNLANVDTSGFRARIAVNKSFPEELMDRIERSMDPVV 60

Query: 61  S--------------------GKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GII 99
                                 +  +   +G+   TG  LD A+EG+ +F ++       
Sbjct: 61  KEGFAPGGRIPIGVLSLANVLHETAMRTTMGALERTGAPLDLAIEGEGFFVVQDGAGNTF 120

Query: 100 LTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG 159
            TR G F+  + G +V+  G   + D   + I    +  +   GE G++   G+ + T+ 
Sbjct: 121 YTRSGHFQRNEQGQVVTHEGMLLLGDGGPIEIGEGTQVLV---GEDGQVFVDGEAVGTVR 177

Query: 160 LYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
           +              S ++        ED+    +  GFLE SN N + EM +MI   + 
Sbjct: 178 VVRFQTPSRLRNVGKSLLAETQESGAPEDVEAPKLAVGFLERSNVNVVEEMTKMIEANRA 237

Query: 220 FNSITTLIDENEKSMLEAIRNIA 242
           + +    +   ++       +  
Sbjct: 238 YEAAAKTVTIQDELSSRLSNSFG 260


>gi|58039417|ref|YP_191381.1| flagellar basal body rod protein FlgG [Gluconobacter oxydans 621H]
 gi|58001831|gb|AAW60725.1| Flagellar basal-body rod protein FlgG [Gluconobacter oxydans 621H]
          Length = 263

 Score =  151 bits (382), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 46/262 (17%), Positives = 101/262 (38%), Gaps = 22/262 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             + +I      A +  + T+++N++N  T G++  + +F +++      +         
Sbjct: 1   MRALDIAGTGMQAQQTNVETISNNIANMSTTGYKRSRAEFQDLIYQNIRRVGASSSDTGT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q    V +   Y   + GS   T   LD A++G  +F ++ P G    TRDG F
Sbjct: 61  TIPAGAQVGLGVKTAAIYRINDQGSLEQTSNSLDLAVQGRGYFQVQLPSGQLAYTRDGTF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQK-DEIFNVGEKGEISQKGKVIATMGLYSVDM 165
            + ++GSLV+A G      +           D+   V  +        ++  + L     
Sbjct: 121 SMDNNGSLVTADGYLISPTITIPNNAQSISVDQSGQVSVQIAGQNNTTLVGQLQLGIFTN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLS-----GVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +  +           +       ++ +G++E+SN N + E+  +I   + +
Sbjct: 181 ENGLAAMGQNLFTQTTASGDAMMGNPEAVGYGSIMQGYVENSNVNVVTEITDLITAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNIA 242
              + +I  ++  M + + N+ 
Sbjct: 241 EMNSKVITASDDMM-KTVTNLG 261


>gi|330826756|ref|YP_004390059.1| flagellar basal-body rod protein FlgF [Alicycliphilus denitrificans
           K601]
 gi|329312128|gb|AEB86543.1| flagellar basal-body rod protein FlgF [Alicycliphilus denitrificans
           K601]
          Length = 246

 Score =  151 bits (382), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 53/244 (21%), Positives = 87/244 (35%), Gaps = 5/244 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       +    A   R + +A+N++N  T GFR     F  V   ++        F  
Sbjct: 1   MDRIIYTSMTGASAAAHRQAVLANNLANVSTYGFRAEMSSFRSV--PLQGSGSTTRVFAL 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119
                  +  G    TG  LD    G+AWFA++        TR G F+VT+ G LV+ +G
Sbjct: 59  EATSGHVETPGPVQRTGRNLDAMAAGNAWFAVQGLDGTEAYTRAGSFEVTEAGQLVTPTG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS--QGFVRRENSGI 177
              + D  +        +              G+   T+G   +        ++R + G+
Sbjct: 119 LPVLSDGGAPITAPQGAELTLGADGTVTARVPGQQPQTVGRLKLATPAQDDPLKRGDDGL 178

Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                  P+       +  G LE SN N +  M  MI   ++F     L+   E     A
Sbjct: 179 FRTASGEPMASDPAARLLAGALEGSNVNPVESMVGMIAAARQFEQQMRLLQTAENDDKTA 238

Query: 238 IRNI 241
            + +
Sbjct: 239 SQLL 242


>gi|319944134|ref|ZP_08018412.1| flagellar basal-body rod protein FlgF [Lautropia mirabilis ATCC
           51599]
 gi|319742628|gb|EFV95037.1| flagellar basal-body rod protein FlgF [Lautropia mirabilis ATCC
           51599]
          Length = 245

 Score =  151 bits (382), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 50/242 (20%), Positives = 95/242 (39%), Gaps = 2/242 (0%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + +    AL +R   ++ N++N  T GFR   +    V    +     ++  V 
Sbjct: 1   MDRMIYLSMTGAKALMERQDALSHNLANASTDGFRADLMTARAVPIREEGTATTRVFNVE 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +   +   + G    TG  LD A+  + WFA+++       TRDG   V + G+L +  G
Sbjct: 61  TSTGFDG-KSGPIRQTGNPLDLAIRDNGWFAVQAADGSEAYTRDGGLVVDEQGNLRTRRG 119

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
           +  + D   + +      ++ + G       + K      L  VD     +++ + G+  
Sbjct: 120 QTVLGDGGPISVPAGADVQVADDGTVMVQVGRQKPSQAGKLKLVDPDMAELKKGDDGLMR 179

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
                       V V +G +E SN N +  M  MI + ++F     L+   E +   A +
Sbjct: 180 MKEGGEAPVSDSVRVVQGAVEGSNVNVVESMVGMIEVQRQFEMQMKLLQTAESNEQRASQ 239

Query: 240 NI 241
            +
Sbjct: 240 IL 241


>gi|319764540|ref|YP_004128477.1| flagellar basal-body rod protein flgf [Alicycliphilus denitrificans
           BC]
 gi|317119101|gb|ADV01590.1| flagellar basal-body rod protein FlgF [Alicycliphilus denitrificans
           BC]
          Length = 246

 Score =  151 bits (382), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 53/244 (21%), Positives = 87/244 (35%), Gaps = 5/244 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       +    A   R + +A+N++N  T GFR     F  V   ++        F  
Sbjct: 1   MDRIIYTSMTGASAAAHRQAVLANNLANVSTNGFRAEMSSFRSV--PLQGSGSTTRVFAL 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119
                  +  G    TG  LD    G+AWFA++        TR G F+VT+ G LV+ +G
Sbjct: 59  EATSGHVETPGPVQRTGRNLDAMAAGNAWFAVQGLDGTEAYTRAGSFEVTEAGQLVTPTG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS--QGFVRRENSGI 177
              + D  +        +              G+   T+G   +        ++R + G+
Sbjct: 119 LPVLSDGGAPITAPQGAELTLGADGTVTARVPGQQPQTVGRLKLATPAQDDPLKRGDDGL 178

Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                  P+       +  G LE SN N +  M  MI   ++F     L+   E     A
Sbjct: 179 FRTASGEPMASDPAARLLAGALEGSNVNPVESMVGMIAAARQFEQQMRLLQTAENDDKTA 238

Query: 238 IRNI 241
            + +
Sbjct: 239 SQLL 242


>gi|187778771|ref|ZP_02995244.1| hypothetical protein CLOSPO_02366 [Clostridium sporogenes ATCC
           15579]
 gi|187772396|gb|EDU36198.1| hypothetical protein CLOSPO_02366 [Clostridium sporogenes ATCC
           15579]
          Length = 255

 Score =  151 bits (382), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 55/258 (21%), Positives = 98/258 (37%), Gaps = 20/258 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKF---SEVVGAI--------- 48
           M  S    ++  ++LE +  T++ N+SN  TVG+++  + F    +V+            
Sbjct: 1   MIRSLYTAVSGMISLEAKQDTISSNLSNASTVGYKSTNLAFKKFEDVLMENYDKKLGNKN 60

Query: 49  -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107
            KN I          +       G    TG   DFALEG  +F +E+      TRDG F 
Sbjct: 61  IKNVIGGLSMGNKIDEVNNLFTQGIIQDTGKPTDFALEGRGFFTIENNGRNYYTRDGHFH 120

Query: 108 VTDDGSLVSASGKYPVLDMA--SVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           V   G LV+ SG   +           I   ++       G IS  G    +  +   + 
Sbjct: 121 VDTRGYLVNDSGYNVMGMNRNTGAREAIFVGNKTIGTDASGNISLNGVPSYSFQVADFND 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225
                +  ++    N P           V++  LE SN N   EM  M+   + F +   
Sbjct: 181 YNSLKKIGDNLFEGNNPQNIN-----GIVRQNSLEKSNVNVTNEMVNMLTTMRSFETNQK 235

Query: 226 LIDENEKSMLEAIRNIAS 243
           ++   ++++ + +  + +
Sbjct: 236 MVQAIDETLGKTVNEVGA 253


>gi|291288380|ref|YP_003505196.1| fagellar hook-basal body protein [Denitrovibrio acetiphilus DSM
           12809]
 gi|290885540|gb|ADD69240.1| fagellar hook-basal body protein [Denitrovibrio acetiphilus DSM
           12809]
          Length = 252

 Score =  151 bits (382), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 55/253 (21%), Positives = 105/253 (41%), Gaps = 15/253 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M        +     ++R+  ++ N++N +TVG +     FSE +       D  I    
Sbjct: 1   MINGLYTATSGMAMQQRRMDIISSNLANLNTVGHKKEVGVFSEYIANASETPDDIIRNSD 60

Query: 61  SGKEYL----------SKEVGSFISTGTELDFALEG-DAWFALESPRGIILTRDGRFKVT 109
             K             + + G    TG  +D AL   +A+FA+++P G+  TRDG F + 
Sbjct: 61  YNKMINSTVRLDDIKVNFQQGYLKETGNSMDMALTNPNAFFAVDTPYGVRFTRDGSFILN 120

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169
           + G L +  G   V +M S+     Q  E   V E+GE+  +G ++  + +   +     
Sbjct: 121 EQGELTTKDGFKVVSNMDSLQPV--QMVEGAIVNEEGEMLLEGALVNNIEIAQFEDLSAL 178

Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
            +   +           +      +  G+LE SN N + EM +MI  ++ F + + +I  
Sbjct: 179 QKTGRNLYVAVDAL--PDVAENPGLMTGYLEGSNVNPVEEMVKMIEASRGFETYSKIITT 236

Query: 230 NEKSMLEAIRNIA 242
            ++   +A+  + 
Sbjct: 237 FDEIDSKAVNEVG 249


>gi|255523679|ref|ZP_05390645.1| protein of unknown function DUF1078 domain protein [Clostridium
           carboxidivorans P7]
 gi|255512548|gb|EET88822.1| protein of unknown function DUF1078 domain protein [Clostridium
           carboxidivorans P7]
          Length = 264

 Score =  151 bits (382), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 47/262 (17%), Positives = 92/262 (35%), Gaps = 22/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M        +A  A + +L ++++N++N  T G++   V F ++V    N          
Sbjct: 1   MLRILWGSKSAMNAQQDKLDSISNNIANESTTGYKREDVSFQDLVYETLNRKGYPNSGDN 60

Query: 56  ------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKV 108
                  + V + + Y     G    T ++ DFA++G+ +F +  P G     R G F +
Sbjct: 61  PKEPINGTGVKATQWYRDNTQGPLRQTDSKTDFAIDGEGYFRVTLPNGTKAYERAGSFNI 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA-------TMGLY 161
            ++G +V   G    ++       +      F              +          G  
Sbjct: 121 DNNGDIVDKDGNRLDIEFTEEGSNLFNSGTGFTQDNFAVKENGEIYLNVDNSNSVYYGKI 180

Query: 162 SVDMSQGF--VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
           +V    G   +      +    P   +       V +G LE+SN N   EM  MI   + 
Sbjct: 181 NVYNPVGQEALSSIGDNLYTANPGAQINVAQNSNVLQGKLEESNVNIGKEMTDMIIAQRA 240

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           F   +  +   ++ M   + ++
Sbjct: 241 FELSSKAMKTGDE-MWGLVNSM 261


>gi|254488392|ref|ZP_05101597.1| flagellar basal-body rod protein FlgG [Roseobacter sp. GAI101]
 gi|214045261|gb|EEB85899.1| flagellar basal-body rod protein FlgG [Roseobacter sp. GAI101]
          Length = 261

 Score =  151 bits (382), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 96/259 (37%), Gaps = 21/259 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             +  I      A + R+ T+++N++N  T G+   + +FS++                 
Sbjct: 1   MRALKIAATGMSAQQMRVETISNNLANMSTTGYNARRAEFSDLHYQQLARAGSVSASDGT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q    V      +    GS   TG +LD A+EG  +  +  P G    TRDG  
Sbjct: 61  VLPTGVQLGLGVRPAAVSMQLAQGSLSVTGGDLDLAIEGKGFLEVTLPSGQAAYTRDGGL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           K T +G +V++ G     ++      +    +    V    + +   +++    +     
Sbjct: 121 KRTGEGLIVTSDGFPVAPEIVIPEDARSISINASGEVFAYFDGNIAAQLLGQFTMSGFSN 180

Query: 166 SQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
           ++G      +                      T+++G+LEDS+ +++ E+ ++I   + +
Sbjct: 181 AKGLEAIGGNLFVETEASGAALVATPGLNGLGTLRQGYLEDSSVDAVREITELIEAQRGY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
                +I   ++ M    +
Sbjct: 241 EMNAKVISAADQMMGATTQ 259


>gi|313672411|ref|YP_004050522.1| flagellar basal-body rod protein flgf [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312939167|gb|ADR18359.1| flagellar basal-body rod protein FlgF [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 251

 Score =  151 bits (382), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 48/253 (18%), Positives = 99/253 (39%), Gaps = 16/253 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50
           M     +  +  +  E+ +S +A+N++N +T G++     F   +   K           
Sbjct: 1   MLNGLYVAASGMMMQERVVSNIANNLANVNTNGYKKDGFTFQNYIAKPKEFPEDIIRSSL 60

Query: 51  DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEG-DAWFALESPRGIILTRDGRFKVT 109
                   V   + YL    G+   TG + D A+   + +F +++P GI  TRDG F + 
Sbjct: 61  YNQTINRTVKLDRNYLDLSEGAVHQTGNKFDLAIGDKNGFFVVDTPWGIRFTRDGAFSIN 120

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169
            D  LV+ SG   +         I            GE+   G  +  + + + + +   
Sbjct: 121 SDNELVNGSGYRVLSRNNQP---IVINGNDVVFLPTGEVMVNGVQVDQLNIATFEDNTRL 177

Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
            +   +  +         ++    + +G++E SN N++ EM +MI   + F +   +I  
Sbjct: 178 QKVGRNLFA--AVDILPVEMENPNIMQGYIEGSNVNAVEEMVKMIEANRGFETYQKVIQT 235

Query: 230 NEKSMLEAIRNIA 242
            ++   +A   + 
Sbjct: 236 IDQLNEKASNELG 248


>gi|260431749|ref|ZP_05785720.1| flagellar basal-body rod protein FlgF [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260415577|gb|EEX08836.1| flagellar basal-body rod protein FlgF [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 236

 Score =  151 bits (382), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 67/241 (27%), Positives = 116/241 (48%), Gaps = 7/241 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M T+  + L+ Q  L   +  VA+N++N +T G+R   + FSE V  +       +S   
Sbjct: 1   MDTA-YVTLSRQSGLMNEMRLVANNIANANTTGYRQQGLVFSEFVRDLPG--APSLSMSR 57

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
                 S E G    TG + DFA+EGD +F +E+P G  LTR G F    +G LV+  G 
Sbjct: 58  GQVRNTSFEQGLLTQTGGQFDFAIEGDGFFLIETPSGNRLTRAGSFAPDANGDLVTPDGY 117

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
              LD    P+ IP      +VG  G +S  G+++  +G+Y        VR  ++   P+
Sbjct: 118 RV-LDSNGAPVFIPPDAATIDVGGDGTLSVDGQLLGQIGVYRPTDGTNLVREASTLFRPD 176

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
               P+E      V   FLE SN N++ ++ ++I + + +    + ++  ++ +  A++ 
Sbjct: 177 GEVEPVEQ---PVVLHRFLEGSNVNAIDQVTKLIEIQRAYELGQSFLEAEDERIRGALKT 233

Query: 241 I 241
           +
Sbjct: 234 L 234


>gi|115523556|ref|YP_780467.1| flagellar basal body rod protein FlgG [Rhodopseudomonas palustris
           BisA53]
 gi|115517503|gb|ABJ05487.1| flagellar basal-body rod protein FlgG [Rhodopseudomonas palustris
           BisA53]
          Length = 262

 Score =  151 bits (382), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 38/259 (14%), Positives = 91/259 (35%), Gaps = 21/259 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55
             +        +A E  +  +++N++N  T  F+  +  F +++      +  +      
Sbjct: 1   MRALYTAATGMMAQELNVQVISNNIANMRTTAFKKQRAAFQDLIYDHVKRVGAQASDQGT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                      V +         G+  +TG +LD A+ G+ +F ++ P G    TRDG F
Sbjct: 61  ILPVGVDIGGGVKTVGTPRIMTQGTLSTTGNDLDMAIRGEGFFKIQMPDGTYTYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
              + G +V+++G      +                V    + S    ++  +GL     
Sbjct: 121 TTDNTGRIVTSNGNPLQPTITIPQGSSGLTINAQGQVTVIAQGSTTATLLGQIGLTRFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++  +      P +D          +++  LE +N  ++ E+  +I   + +
Sbjct: 181 KTGLQPIGDNLFTETPASGPPQDGTANADGYGDIQQQTLEQANVEAVTEISDLISAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
                ++   ++ +     
Sbjct: 241 EMNAKVVSAADQMLQSTSN 259


>gi|148256792|ref|YP_001241377.1| flagellar basal body rod protein FlgG [Bradyrhizobium sp. BTAi1]
 gi|146408965|gb|ABQ37471.1| Flagellar basal-body rod protein flgG (Distal rod protein)
           [Bradyrhizobium sp. BTAi1]
          Length = 262

 Score =  151 bits (381), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 43/258 (16%), Positives = 89/258 (34%), Gaps = 21/258 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55
             + +       A E  +  +++N++N  T GF+     F +++      +  +      
Sbjct: 1   MQALHTAATGMAAQELNVQVISNNIANLRTTGFKKQTAAFQDLIYDHVRRVGAQSSDQGT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                      V +     S   G+   TG  LD A+ G+ +F +  P G    TRDG F
Sbjct: 61  ILPVGIDIGGGVKTVGTPRSMTQGTLSQTGNSLDLAISGEGFFKILMPDGTFQYTRDGTF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165
           ++ + G +V+A G      ++                      S    ++  + L     
Sbjct: 121 QMDNQGRIVTAQGNPVQPTISIPQNASGITVNAQGQVSVTLPGSTTSNIVGQLQLTRFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     N+  +        +D         ++ +G LE +N + + EM ++I   + +
Sbjct: 181 KAGLQPVGNNQFTDTPSSGAPQDGVANQDGLGSITQGSLEQANVDVVSEMSELIAAQRAY 240

Query: 221 NSITTLIDENEKSMLEAI 238
                +I   ++ M    
Sbjct: 241 EMNAKVISAADQMMQSTT 258


>gi|89902478|ref|YP_524949.1| flagellar basal-body rod FlgF [Rhodoferax ferrireducens T118]
 gi|89347215|gb|ABD71418.1| Flagellar basal-body rod FlgF [Rhodoferax ferrireducens T118]
          Length = 246

 Score =  151 bits (381), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 53/245 (21%), Positives = 91/245 (37%), Gaps = 5/245 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       ++   A   R + +++N++N  T GFR     F  V   ++ D         
Sbjct: 1   MDRLIYTAMSGANAAAHRQAVLSNNLANVSTNGFRAELSTFRAV--PVRGDGASTRVMAI 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119
                     GS   TG  LD    G+AWFA++        TR G F+V+ +G+LV+ SG
Sbjct: 59  EATAGYVDTPGSAQRTGRGLDAMTTGNAWFAVQGLDGTESYTRSGSFEVSPEGTLVTNSG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS--QGFVRRENSGI 177
              + D  +        +               +    +G   +        + R   G+
Sbjct: 119 LTVLGDGGAPISIPTGGEVTIGFDGNLSAKVGNQPPTGVGRLKLVTPGADDPLNRSEDGL 178

Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                  PL + +   V+ G LE SN N++  M  MI   ++F +   L+   E +   A
Sbjct: 179 FRATSGEPLPNDTNARVQVGSLEGSNVNAIEAMVGMIQTARQFETQMRLLQTAESNDRSA 238

Query: 238 IRNIA 242
            + + 
Sbjct: 239 AQLLG 243


>gi|148980300|ref|ZP_01815987.1| putative flagellar basal-body rod protein [Vibrionales bacterium
           SWAT-3]
 gi|145961319|gb|EDK26629.1| putative flagellar basal-body rod protein [Vibrionales bacterium
           SWAT-3]
          Length = 250

 Score =  151 bits (381), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 93/249 (37%), Gaps = 20/249 (8%)

Query: 12  QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK-------------ISF 58
             A + +++ +++N++N +TVGF+  +V F ++  ++      +              + 
Sbjct: 1   MAAQDAKMTAISNNLANINTVGFKRDRVVFEDLFYSVDKQAGTETTELNEHPTGIQLGNG 60

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLVSA 117
           V           G+  +T  + D A+ GD +F +E+  G +  TR+G+F+   DG LV+ 
Sbjct: 61  VRVVGTEKVFTQGNIQNTNQQFDLAILGDGFFQIENSDGELLYTRNGQFQTNSDGQLVNT 120

Query: 118 SGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
            G   + ++   P   +        V          + +  + +       G   +  + 
Sbjct: 121 QGYPLIPEVVIPPEATLVSITADGVVSATIPGQVNPEDLGQITIVKFMNPAGLSAQGGNL 180

Query: 177 ISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
                      +          +K+G LE SN   + EM  MI   + +     ++   +
Sbjct: 181 FVETEGSGEAVELVAGTEGSGQLKQGALEGSNVQVVEEMVDMIATQRAYEMSAKMVSAAD 240

Query: 232 KSMLEAIRN 240
           + +    + 
Sbjct: 241 EMLQYIAQQ 249


>gi|307945665|ref|ZP_07661001.1| flagellar basal-body rod protein FlgF [Roseibium sp. TrichSKD4]
 gi|307771538|gb|EFO30763.1| flagellar basal-body rod protein FlgF [Roseibium sp. TrichSKD4]
          Length = 246

 Score =  151 bits (381), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 64/248 (25%), Positives = 117/248 (47%), Gaps = 12/248 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK-----NDIDQK 55
           M+ +  I L+ Q AL  +L+ VA+NM+N +T GF+  ++ F E V  +      N  D  
Sbjct: 1   MENAQLIALSRQSALRNQLNVVANNMANINTGGFKAQRLLFEEYVMPVAEATEFNRRDHD 60

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSL 114
           + +V           GS   TG ELD A+EGD +F +++  G    TR+G F + + G L
Sbjct: 61  LFYVQDYGTRTEFMPGSIKLTGNELDIAIEGDGFFVVQTADGGEAYTRNGGFTLDEAGQL 120

Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174
           V+ + K  +      PI     D   ++   G IS +  V   + + + D  Q  V+  +
Sbjct: 121 VTPNDKPVL--TEGGPINFTTADGKIDISRDGTISTELGVRGRIRVVNFDNPQNLVQMGD 178

Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
           +              + V V +G +E SN   + E+ ++I +T+ + +++ +I + ++  
Sbjct: 179 NLFQ----GENAIPNAKVRVTQGAIEQSNVEGVVEVTRLIEITRAYTTVSKMIKDADELR 234

Query: 235 LEAIRNIA 242
            +AI  + 
Sbjct: 235 QKAISTLG 242


>gi|188582486|ref|YP_001925931.1| flagellar basal-body rod protein FlgG [Methylobacterium populi
           BJ001]
 gi|179345984|gb|ACB81396.1| flagellar basal-body rod protein FlgG [Methylobacterium populi
           BJ001]
          Length = 263

 Score =  151 bits (381), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 35/259 (13%), Positives = 81/259 (31%), Gaps = 21/259 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55
             +         A E  +  +++N++N  T G++  +V F +++                
Sbjct: 1   MRALYAAATGMAAQELNVQVISNNIANLRTTGYKRQQVHFQDLLYQNLRRSGSSTSDQNT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    S V +     +   G    T  + D A+ G+  F +  P      TRDG F
Sbjct: 61  ILPAGLALGSGVKTTSTARAMSQGPLAQTDKDYDVAIRGEGLFRVRLPDGRNAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165
            +   G LV+  G      +                 +         + +    L     
Sbjct: 121 DLDAQGQLVTRDGYLLDPGVTVPNTATSVTISATGAVQATLPGQTAPQALGQFQLARFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++         P             +++ +LE++N N++ E+  +I   + +
Sbjct: 181 KVGLESIGDNLFVETAASGPAITGLPGSEGFGNLQQNWLEEANVNAVTEISSLIAAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              + ++   ++ +    +
Sbjct: 241 EMNSKVVTAADQMLSTTSQ 259


>gi|148270379|ref|YP_001244839.1| hypothetical protein Tpet_1249 [Thermotoga petrophila RKU-1]
 gi|147735923|gb|ABQ47263.1| protein of unknown function DUF1078 domain protein [Thermotoga
           petrophila RKU-1]
          Length = 249

 Score =  151 bits (381), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 47/257 (18%), Positives = 95/257 (36%), Gaps = 24/257 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M           L    +L  +A++++N DT G++  +  F   +               
Sbjct: 1   MTRGIYNAAMGMLVDMAKLDRIANDLANVDTAGYKQDREAFRAYLRREVFRQEPDPVESR 60

Query: 49  --KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106
             K  I          +       G    T      A+ G+ +F +E   G   TR+G F
Sbjct: 61  TKKVPIGPLEYATVLDEVRTDLSQGPVEKTDVPYHLAINGEGFFRIEFNGGEYYTRNGEF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
            V  +G +V+  G Y  LD     ++      +   G        G ++  +G+Y+++  
Sbjct: 121 TVNSEGYIVTNYGGYL-LDENGERVRFFDDFTVDEEGYV--RDAYGNIVTRIGVYNLENP 177

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
           + F     +G +P+             + +G++E SN +++  M  MI   + +      
Sbjct: 178 EKFGNTLFTGENPS-------PSENFRIMQGYVEKSNVDALKAMVDMISAMRHYELSQRA 230

Query: 227 IDENEKSMLEAIRNIAS 243
           +  N++   + I ++AS
Sbjct: 231 VTVNDELNGKLINSLAS 247


>gi|114799934|ref|YP_758986.1| flagellar basal body rod protein FlgF [Hyphomonas neptunium ATCC
           15444]
 gi|114740108|gb|ABI78233.1| flagellar basal-body rod protein FlgF [Hyphomonas neptunium ATCC
           15444]
          Length = 238

 Score =  151 bits (381), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 68/242 (28%), Positives = 119/242 (49%), Gaps = 6/242 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M +     LA Q  L Q +  VA+N++N+ T G+++ +  F+E + +  +  DQ +S   
Sbjct: 1   MSSPIYTTLARQQGLMQEMQVVANNLANSSTTGYKSDRAIFTEFLVSTGDSPDQSLSMGG 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
            G      E G    TG   D A++G+ +F +E+P+G  LTR G F+++  G LV   G 
Sbjct: 61  LGGHAFQLEQGGLNFTGGRFDLAIQGEGFFMVETPQGERLTRAGHFQLSGAGQLVDMQGN 120

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
            PVL     PI IP      + GE G IS  G++I  +G+   D      R  N+  +  
Sbjct: 121 -PVLSAGGNPITIPDDATDVSFGEDGTISGNGQIIDQVGIMLADG--QLTRDSNTYFAAE 177

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
               P +D     + +G LE SN + + E+ +MI + + + +   L+++ ++ + + I  
Sbjct: 178 GGVAPTQD---AKLVQGALEQSNVSPVLEVSRMIEVQRAYEAGQALLEKEDQRISQLITA 234

Query: 241 IA 242
           + 
Sbjct: 235 VR 236


>gi|262173356|ref|ZP_06041033.1| flagellar basal-body rod protein FlgG [Vibrio mimicus MB-451]
 gi|261890714|gb|EEY36701.1| flagellar basal-body rod protein FlgG [Vibrio mimicus MB-451]
          Length = 250

 Score =  151 bits (381), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 44/250 (17%), Positives = 92/250 (36%), Gaps = 20/250 (8%)

Query: 12  QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------------QKISF 58
             A + +++ +++N++N +T GF+  +V F ++   I+                 Q  S 
Sbjct: 1   MAAQDTKMTAISNNLANVNTAGFKRDRVVFEDLFYNIQRQPGAQVDQVNELPTGVQLGSG 60

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSA 117
           V           G+  +T  ELD A+ G  +F +E+    I+ TR+G+F V  +G +V++
Sbjct: 61  VRVVGTQKVFTQGNAQNTAQELDLAVMGQGFFQIENSDGQIMYTRNGQFHVNSEGLMVNS 120

Query: 118 SGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
            G      +      +     +   V          + +  + L       G      + 
Sbjct: 121 QGLPLEPQIQIPDNVVSLSIGVDGTVSATTAGDPAPQQLGQITLAKFINPAGLEAVGGNL 180

Query: 177 ISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
                     E          ++K+G LE SN   + EM  MI   + +     ++   +
Sbjct: 181 FRETDASGLAEELVAGQDGTGSIKQGALEGSNVQVVEEMVDMITTQRAYEMNAKVVSATD 240

Query: 232 KSMLEAIRNI 241
             +    +++
Sbjct: 241 DMLKFVAQSV 250


>gi|258514026|ref|YP_003190248.1| hypothetical protein Dtox_0711 [Desulfotomaculum acetoxidans DSM
           771]
 gi|257777731|gb|ACV61625.1| protein of unknown function DUF1078 domain protein
           [Desulfotomaculum acetoxidans DSM 771]
          Length = 262

 Score =  151 bits (381), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 44/262 (16%), Positives = 97/262 (37%), Gaps = 20/262 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56
           M  +  IG +A  A +  + + A+N++N +T  ++  + +F++++               
Sbjct: 1   MIKTLGIGASALNANQTYIDSAANNIANVNTDEYKAERTRFTDLLYNYYYRGTTYPAPTV 60

Query: 57  ---------SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    + V  G+     E G+   T   +D A++G  +  + SP    + +R G  
Sbjct: 61  DEKATESSGNGVRIGEVKKVFEPGTIKETSNSMDLAIDGAGFIKVISPDGEELFSRGGVL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           KV  DG +  A+G     ++                      +   + IA + +Y+    
Sbjct: 121 KVNSDGVIEDAAGNIIEPEIQLPEGLQNFSISPSGQVTVINGAGMKEEIANISIYNFINP 180

Query: 167 QGFVRRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221
            G + ++N                       ++++GF E SN + + EM ++I   + + 
Sbjct: 181 AGLIAQDNKLYLQTEQSGEAAEGAPGTDGYGSLRQGFTEMSNVDLIQEMVRLIEAQRAYE 240

Query: 222 SITTLIDENEKSMLEAIRNIAS 243
                I   +  M     +++S
Sbjct: 241 INARSIKTADD-MWGMANSLSS 261


>gi|170758901|ref|YP_001787959.1| flagellar basal body rod protein FlgG [Clostridium botulinum A3
           str. Loch Maree]
 gi|169405890|gb|ACA54301.1| flagellar basal body rod protein [Clostridium botulinum A3 str.
           Loch Maree]
          Length = 255

 Score =  151 bits (381), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 54/258 (20%), Positives = 98/258 (37%), Gaps = 20/258 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKF---SEVVGAI--------- 48
           M  S    ++  ++LE +  T++ N+SN  TVG+++  + F    +V+            
Sbjct: 1   MIRSLYTAVSGMISLEAKQDTISANLSNASTVGYKSTNLAFKKFEDVLMENYDKKLGNKN 60

Query: 49  -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107
            +N I          +       G    TG   DFALEG  +F +E+      TRDG F 
Sbjct: 61  IQNIIGGLSMGNKIDEVNNLFTQGIIQDTGKPTDFALEGRGFFTIENNGRNYYTRDGHFH 120

Query: 108 VTDDGSLVSASGKYPVL--DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           V   G LV+ SG   +           I   ++       G IS  G    +  +   + 
Sbjct: 121 VDTRGYLVNDSGYNVMGINRNTGAREAIFVGNKTIGTDASGNISLNGVPSYSFQVADFND 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225
                +  ++    N P           V++  LE SN N   EM  M+   + F +   
Sbjct: 181 YNSLKKIGDNLFEGNNPQNIN-----GIVRQNSLEKSNVNVTNEMVNMLTTMRSFETNQK 235

Query: 226 LIDENEKSMLEAIRNIAS 243
           ++   ++++ + +  + +
Sbjct: 236 IVQSIDETLGKTVNEVGA 253


>gi|149203125|ref|ZP_01880096.1| flagellar basal-body rod protein FlgG [Roseovarius sp. TM1035]
 gi|149143671|gb|EDM31707.1| flagellar basal-body rod protein FlgG [Roseovarius sp. TM1035]
          Length = 261

 Score =  151 bits (381), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 41/256 (16%), Positives = 91/256 (35%), Gaps = 21/256 (8%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID----------- 53
             I      A + R+ T+++N++N  T G+   + +F+++                    
Sbjct: 4   LKIAATGMAAQQMRVETISNNLANMSTTGYNARRAEFADLHYQQLARAGTINAADGTVLP 63

Query: 54  ---QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVT 109
              Q    V      +    GS   T  +LD A++G  +  +  P G    TRDG  K +
Sbjct: 64  TGVQLGLGVRPSAISVQLAQGSLTQTNGDLDLAIDGGGYLEVRLPSGQSGYTRDGALKRS 123

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE-KGEISQKGKVIATMGLYSVDMSQG 168
            DG +V++ G     ++                     + + + + +  + L      +G
Sbjct: 124 ADGVIVNSEGFPIAPEITIPEDARSITINAEGEVFAFFQDTAEAQQLGQIDLVGFTNPKG 183

Query: 169 FVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223
                 +         P            T+++G+LEDS+ + + E+ ++I   + +   
Sbjct: 184 LEAIGGNLFVETEASGPANVTTAGQDGLGTLRQGYLEDSSVDPVREITELIEAQRGYELN 243

Query: 224 TTLIDENEKSMLEAIR 239
             +I   ++ +    +
Sbjct: 244 AKVITAADQMLSATTQ 259


>gi|114570497|ref|YP_757177.1| flagellar basal body rod protein FlgG [Maricaulis maris MCS10]
 gi|114340959|gb|ABI66239.1| flagellar basal-body rod protein FlgG [Maricaulis maris MCS10]
          Length = 261

 Score =  151 bits (381), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 98/259 (37%), Gaps = 21/259 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             +         A +  +  +++N++N +T GF+  + +F +++      +         
Sbjct: 1   MRALTTAATGMQAQQLNVEVISNNLANMNTTGFKRQRAEFQDLLYQNVQQMGAASSDAGT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q    V +   Y   E G+  +TG   D A+ G+ +F ++ P      TR G F
Sbjct: 61  IVPTGVQVGLGVQTASIYRITEQGALSNTGNPFDLAVSGEGYFRVQMPDGSDGFTRAGNF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVP-IQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
            V+ DG LV++ G      +A     +  + +    V  + +     + +  + L +   
Sbjct: 121 AVSGDGELVTSEGYTVAPGIAIPNGARQIEINIQGQVQVQIDGQTDMQTVGQIELATFFN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +              +  +     +++GF+E SN NS+ E+  +I   + +
Sbjct: 181 QAGLEAIGGNLFLETAASGSASLGTPGSPGFGDIQQGFVETSNVNSVSEITALIQAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
                +I  +++ M  +  
Sbjct: 241 EMNARVITASDEMMAASSN 259


>gi|217977819|ref|YP_002361966.1| flagellar basal body rod protein [Methylocella silvestris BL2]
 gi|217503195|gb|ACK50604.1| flagellar basal body rod protein [Methylocella silvestris BL2]
          Length = 241

 Score =  151 bits (380), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 76/243 (31%), Positives = 141/243 (58%), Gaps = 4/243 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           MQ+   + L+  +AL++RL+T+A N++N  T G+R  +V+F  ++     +    ++FV+
Sbjct: 1   MQSGLYVSLSGLVALDRRLTTIAANVANQSTPGYRAEEVEFKSLLSKAGAN---PVAFVS 57

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           +G+ ++S+  G  I T   LD A++G  W AL++P G + T+DGR  + + G+LVS  G 
Sbjct: 58  NGESFISRRGGVPIKTDGPLDVAVQGHGWLALKTPDGTVYTKDGRMHMEESGALVSVDG- 116

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
           +PVLD  + PI +        + + G I+Q    +  +G++S+D      R  NSG+  +
Sbjct: 117 FPVLDAGATPILLDPAAGPPTIAQDGMITQNSHQVGAIGIFSLDGQAKLKRYTNSGVMSD 176

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
           +P T   D S   V +GF+E +N N + EM ++I +++ F +I +  + +E S+ +AI+ 
Sbjct: 177 LPATAELDFSNNGVHQGFIEGANINPILEMAKLIMVSRAFENIHSATEGSESSLKDAIKT 236

Query: 241 IAS 243
           + +
Sbjct: 237 LGA 239


>gi|153940763|ref|YP_001391938.1| flagellar basal body rod protein FlgG [Clostridium botulinum F str.
           Langeland]
 gi|152936659|gb|ABS42157.1| flagellar basal body rod protein [Clostridium botulinum F str.
           Langeland]
 gi|295319958|gb|ADG00336.1| flagellar basal body rod protein [Clostridium botulinum F str.
           230613]
          Length = 263

 Score =  151 bits (380), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 53/264 (20%), Positives = 107/264 (40%), Gaps = 24/264 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI----------KN 50
           M  +     +  +A + +L ++++N++N +TVG++   V F E+V             + 
Sbjct: 1   MLRALWNSKSGLIAQQNKLDSISNNLANVNTVGYKREDVSFQELVQETLKRKGYPTSDRP 60

Query: 51  DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVT 109
           +I       A+     + + G  ++TG + D A++G  +F +  P G     R G F V 
Sbjct: 61  EIQTGTGVKATNWIRDTHQQGILLNTGNKTDLAIDGQGFFRVIMPDGNYAYERSGNFVVD 120

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-----------IATM 158
            +G LV  +G    + +                     I++ G +           +  +
Sbjct: 121 RNGMLVDENGNRLEIQLQQPAGGQILNRIGGFSKNNINIAEDGSISVKDIDGMNKMVGKI 180

Query: 159 GLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
            +Y+   S  FV    +   P      +   + V++ +GFLE+SN ++  EM +MI   +
Sbjct: 181 NIYNAVGSDAFVSIGRNLYIPQ-EGVNVFTNNDVSILQGFLENSNVDAGKEMTEMIITQR 239

Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242
            F   +  I   ++ M   + N+ 
Sbjct: 240 AFELSSRGIKTADE-MWGIVNNMR 262


>gi|332525065|ref|ZP_08401245.1| flagellar basal-body rod protein FlgF [Rubrivivax benzoatilyticus
           JA2]
 gi|332108354|gb|EGJ09578.1| flagellar basal-body rod protein FlgF [Rubrivivax benzoatilyticus
           JA2]
          Length = 240

 Score =  151 bits (380), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 55/244 (22%), Positives = 91/244 (37%), Gaps = 5/244 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + +    A  +R   +A+N++N  T GFR     F  V   ++ D      +  
Sbjct: 1   MDRLIYLSMGGAKATMERQDVLANNLANASTTGFRAELQAFRAV--PVRGDGASTRVYAL 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119
                   + G    TG  LD A+ G +W A++S       TR G  +V+ +G LV+ SG
Sbjct: 59  ESTVGHDDQSGPLQVTGRNLDVAMRGKSWLAVQSLDGTEAYTRAGSMEVSAEGVLVTPSG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
              + D   + +       I   G     +  GK  A   L  V       R  +     
Sbjct: 119 LPVLGDGGPITVPANATLTIGADGTVSAAANGGKPQAIGRLKLVTPEAPLTRGTDGLFRA 178

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
                P        ++ G LE SN + +  M QMI   ++F     ++   E+    A +
Sbjct: 179 ADGDLP--ADPAARLQDGALEGSNVSPVETMVQMISAARQFEQQIKMLQTAEQKEQGATK 236

Query: 240 NIAS 243
            +A+
Sbjct: 237 LLAT 240


>gi|258621050|ref|ZP_05716084.1| flagellar basal-body rod protein FlgF [Vibrio mimicus VM573]
 gi|258625278|ref|ZP_05720186.1| flagellar basal-body rod protein FlgF [Vibrio mimicus VM603]
 gi|262166281|ref|ZP_06034018.1| flagellar basal-body rod protein FlgF [Vibrio mimicus VM223]
 gi|262170826|ref|ZP_06038504.1| flagellar basal-body rod protein FlgF [Vibrio mimicus MB-451]
 gi|258582451|gb|EEW07292.1| flagellar basal-body rod protein FlgF [Vibrio mimicus VM603]
 gi|258586438|gb|EEW11153.1| flagellar basal-body rod protein FlgF [Vibrio mimicus VM573]
 gi|261891902|gb|EEY37888.1| flagellar basal-body rod protein FlgF [Vibrio mimicus MB-451]
 gi|262025997|gb|EEY44665.1| flagellar basal-body rod protein FlgF [Vibrio mimicus VM223]
          Length = 249

 Score =  151 bits (380), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 56/241 (23%), Positives = 102/241 (42%), Gaps = 11/241 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  + ++      Q +   A+N++N  T GFR    +   +      +      F  
Sbjct: 1   MDRALFLAMSGAKQNMQAMQLRANNLANVSTTGFRADLAQARSM--QAYGEGLPTRVFSM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASG 119
           + +   +   GS I+TG +LD  ++G+ W ++ +      LTR+G  ++ + G L++ +G
Sbjct: 59  TERPGHNFAQGSVITTGRDLDITIQGEGWISVLDKTGKEGLTRNGNLRIDETGLLLNGNG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172
            +PVL     PI +P       +G  G IS + +      +  VD         Q   + 
Sbjct: 119 -HPVLGETGAPITLPVPLTKVEIGGDGTISVRPQGAPADAMEVVDRIKLVRLNDQALFKD 177

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            N       P T  E  + V +  G LE SN N++ EM  +I L ++F     ++   E+
Sbjct: 178 VNGLFRATDPNTQFEADASVKILTGALEGSNVNAIGEMTSLIDLQRQFEMQVKMMSTAEE 237

Query: 233 S 233
            
Sbjct: 238 M 238


>gi|326404069|ref|YP_004284151.1| flagellar basal-body rod protein FlgG [Acidiphilium multivorum
           AIU301]
 gi|325050931|dbj|BAJ81269.1| flagellar basal-body rod protein FlgG [Acidiphilium multivorum
           AIU301]
          Length = 260

 Score =  151 bits (380), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 91/259 (35%), Gaps = 21/259 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             + +I      A +  +  +++N++N  T G++  +V F +++                
Sbjct: 1   MRALDIAATGMQAQQTNVEVISNNIANMTTTGYKAQRVAFQDLLYQDLRRAGSNSSDAGT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q    V +   Y   + G+   T   LD A+ G+ WF +  P      TRDG F
Sbjct: 61  IVPSGTQIGLGVKTAAIYRIDQQGNLQQTNNTLDMAISGNGWFQVTLPSGQTAYTRDGTF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
            ++ +G++V+A G      +                V          + +  + L     
Sbjct: 121 GLSPNGTIVTADGYVVQPGIQIPTNATNVTINASGQVQVSLPGQTAPQTVGQLQLAVFPN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G   +  +              +       TV +GF+E+SN N + E+  +I   + +
Sbjct: 181 DAGLAAQGGNLFLQTAASGNPVTGAPSAPGFGTVMQGFVENSNVNVVSEVTDLITAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
           +  + ++    + +    +
Sbjct: 241 DMNSQVVTATNQMLSTLTQ 259


>gi|226950051|ref|YP_002805142.1| flagellar basal body rod protein [Clostridium botulinum A2 str.
           Kyoto]
 gi|226842618|gb|ACO85284.1| flagellar basal body rod protein [Clostridium botulinum A2 str.
           Kyoto]
          Length = 255

 Score =  151 bits (380), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 54/258 (20%), Positives = 98/258 (37%), Gaps = 20/258 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKF---SEVVGAI--------- 48
           M  S    ++  ++LE +  T++ N+SN  TVG+++  + F    +V+            
Sbjct: 1   MIRSLYTAVSGMISLEAKQDTISANLSNASTVGYKSTNLAFKKFEDVLMENYDKKLGNKN 60

Query: 49  -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107
            +N I          +       G    TG   DFALEG  +F +E+      TRDG F 
Sbjct: 61  IQNIIGGLSMGNKIDEVNNLFTQGIIQDTGKPTDFALEGRGFFTIENNGRNYYTRDGHFH 120

Query: 108 VTDDGSLVSASGKYPVL--DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           V   G LV+ SG   +           I   ++       G IS  G    +  +   + 
Sbjct: 121 VDTRGYLVNDSGYNVMGINRNTGAREAIFVGNKTIGTDASGNISLNGVPSYSFQVADFND 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225
                +  ++    N P           V++  LE SN N   EM  M+   + F +   
Sbjct: 181 YNSLKKIGDNLFEGNNPQNIN-----GIVRQNSLEKSNVNVTNEMVNMLTTMRSFETNQK 235

Query: 226 LIDENEKSMLEAIRNIAS 243
           ++   ++++ + +  + +
Sbjct: 236 IVQSIDETLGKTVNEVGA 253


>gi|320354341|ref|YP_004195680.1| flagellar hook-basal body protein [Desulfobulbus propionicus DSM
           2032]
 gi|320122843|gb|ADW18389.1| flagellar hook-basal body protein [Desulfobulbus propionicus DSM
           2032]
          Length = 244

 Score =  151 bits (380), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 52/244 (21%), Positives = 97/244 (39%), Gaps = 3/244 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI-SFV 59
           M +     L+  +A EQ +S VA N++N  T GF+  ++ F+ ++   +   D +  +F 
Sbjct: 1   MGSGKYSALSGAVAREQAMSNVAANLANVSTTGFKKDRISFAAILRGAQQASDARGINFA 60

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119
              K  +    G    T   LD A++G  +F +        TR GR  + D+G + +  G
Sbjct: 61  RIRKIGVDFSQGGMQPTDRPLDVAIDGPGFFKVRKGGETFYTRSGRLMLDDNGMVKTEDG 120

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
              +              +   + E G+IS  G +            Q  +++  + +  
Sbjct: 121 LNVLGAGNEPLQIDTALGKDIVIAESGDISVAGTLTGNRIQVFAVPDQDKLKKAGNALYA 180

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
                  + L+   V +G LE SN N + EM  M+   + F +    ++   K + E   
Sbjct: 181 LEEG-GDQPLADYRVLQGSLETSNVNMIEEMTAMVDTQRTFEAHLKALESYSK-LGEKQD 238

Query: 240 NIAS 243
            + S
Sbjct: 239 ELGS 242


>gi|299131785|ref|ZP_07024980.1| flagellar basal-body rod protein FlgG [Afipia sp. 1NLS2]
 gi|298591922|gb|EFI52122.1| flagellar basal-body rod protein FlgG [Afipia sp. 1NLS2]
          Length = 262

 Score =  151 bits (380), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 37/258 (14%), Positives = 83/258 (32%), Gaps = 21/258 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55
             +         A E  +  +++N++N  T G++     F +++      +  +      
Sbjct: 1   MRALYTAATGMAAQELSVQVISNNIANLRTTGYKKQMASFQDLLYEHVQRVGAQASDQGT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                      V +         G+    G +L+ A+ G+ +F ++ P      TRDG F
Sbjct: 61  VLPVGIDIGGGVKTVGTPRLMTQGTLSPVGGDLNVAVRGEGYFKIQLPDSTYAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165
                G +V+A G      ++                      S    V+  + L     
Sbjct: 121 TTDGQGRIVNAQGNLVQPTISIPQNASQLTINAQGQVSVILPGSTTPSVLGQITLTRFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++  +      P +D          +++G LE +N   + E+  +I   + +
Sbjct: 181 KAGLQSIGDNLFTDTPASGPPQDGLANADGFGDIQQGNLEQANVEVVSEISDLIAAQRAY 240

Query: 221 NSITTLIDENEKSMLEAI 238
                ++   ++ M    
Sbjct: 241 EMNAKVVSAADQMMQSTT 258


>gi|221635450|ref|YP_002523326.1| flagellar basal-body rod protein FlgF (Putative proximal rod
           protein) [Thermomicrobium roseum DSM 5159]
 gi|221157298|gb|ACM06416.1| flagellar basal-body rod protein FlgF (Putative proximal rod
           protein) [Thermomicrobium roseum DSM 5159]
          Length = 248

 Score =  151 bits (380), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 58/250 (23%), Positives = 100/250 (40%), Gaps = 15/250 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVV-----GAIKNDI 52
           M  +     A  +A   R  T+A N++N +T G+R  +     F ++          + I
Sbjct: 1   MIRTIYQAAAGMMAQFARQLTLATNLANIETPGYRQQESTIRDFQQMFLLRLGRGEASPI 60

Query: 53  DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDG 112
               + V   K  +    GS I TG  LD AL G A+FA+++P G+  TRDGRF++    
Sbjct: 61  GTLSTAVRWDKPLVDLRQGSLIETGRPLDLALAGRAFFAIQTPDGVEYTRDGRFQLDAQR 120

Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172
            LV+A G   +         +        V   G I    +V+  + L        F   
Sbjct: 121 RLVTADGHPVL----GEQGPLVLPAGDIWVEPDGTILVGEQVVGRLLLVEFPPDAQFEPV 176

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
             +    +    P E      V +GFLE SN +    +  M+  T+ +      +   ++
Sbjct: 177 AGNRYRTDATGAPSET---TGVSQGFLEASNVDLTQTLTDMLAATRSYQLAARSLQLADE 233

Query: 233 SMLEAIRNIA 242
           ++  A+ ++ 
Sbjct: 234 TLRLAVNSVG 243


>gi|148380595|ref|YP_001255136.1| flagellar basal body rod protein [Clostridium botulinum A str. ATCC
           3502]
 gi|153933262|ref|YP_001384882.1| flagellar basal body rod protein FlgG [Clostridium botulinum A str.
           ATCC 19397]
 gi|153935902|ref|YP_001388351.1| flagellar basal body rod protein FlgG [Clostridium botulinum A str.
           Hall]
 gi|168180938|ref|ZP_02615602.1| flagellar basal body rod protein [Clostridium botulinum NCTC 2916]
 gi|148290079|emb|CAL84198.1| putative flagellar basal-body rod protein [Clostridium botulinum A
           str. ATCC 3502]
 gi|152929306|gb|ABS34806.1| flagellar basal body rod protein [Clostridium botulinum A str. ATCC
           19397]
 gi|152931816|gb|ABS37315.1| flagellar basal body rod protein [Clostridium botulinum A str.
           Hall]
 gi|182668229|gb|EDT80208.1| flagellar basal body rod protein [Clostridium botulinum NCTC 2916]
          Length = 263

 Score =  151 bits (380), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 49/264 (18%), Positives = 107/264 (40%), Gaps = 24/264 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI----------KN 50
           M  +     +  +A + +L ++++N++N +TVG++   V F E+V             + 
Sbjct: 1   MLRALWNSKSGLIAQQNKLDSISNNLANVNTVGYKREDVSFQELVQETLKRKGYPTSDRP 60

Query: 51  DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVT 109
           +I       A+     + + G+ ++TG + D A++G  +F +    G     R G F + 
Sbjct: 61  EIQTGTGVKATNWIRDTHQQGALLTTGNKTDLAIDGQGFFRVIMADGDYAYERSGNFLID 120

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-----------IATM 158
            +G LV  +G    + +                     I++ G +           +  +
Sbjct: 121 RNGMLVDENGNALDIQLQQPEGMQILNRIGGFDANNINIAEDGSISVRDTDGLNKVVGKI 180

Query: 159 GLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
            +Y+   +  F+    +   P      +   + V++ +GFLE+SN ++  EM +MI   +
Sbjct: 181 NIYNAVGADAFLSIGRNLYLP-RDGVNVFVNNDVSILQGFLENSNVDAGKEMTEMIITQR 239

Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242
            F   +  I   ++ M   + N+ 
Sbjct: 240 AFELSSRGIKTADE-MWGIVNNMR 262


>gi|167579489|ref|ZP_02372363.1| flagellar basal body rod protein FlgF [Burkholderia thailandensis
           TXDOH]
          Length = 253

 Score =  151 bits (380), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 54/250 (21%), Positives = 85/250 (34%), Gaps = 10/250 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-----QK 55
           M       +       ++ S VA+N++N  T GFR     F  V    ++          
Sbjct: 1   MDRLIYTAMTGATQSLEQQSVVANNLANASTTGFRAQLATFRAVPMNFEDGSGNVDPATT 60

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSL 114
            ++  S         G    TG  LD A++G  W ++  P      TR G   V  +G L
Sbjct: 61  RTYTLSSTPGADFAPGPIERTGNPLDVAIQGPGWLSVMLPDGSEAYTRAGNLHVDQNGQL 120

Query: 115 VSASGKYPVLDMAS---VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171
           V+A+    V +       P           V           V     L  V+     ++
Sbjct: 121 VTANNLPVVGNGGPLAVPPNSQLTIGADGTVSALMPGDPPTAVAMIDQLKLVNPDPATMK 180

Query: 172 RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
           R + G+       P +    V V    LE SN N +  M  MI   + F   T LI   +
Sbjct: 181 RGDDGLFRTADGNPADADPAVKVVPNSLEGSNVNPVAAMVSMIDNARAFELQTKLIQSAD 240

Query: 232 KSMLEAIRNI 241
           ++  +A   +
Sbjct: 241 QN-EQAANQL 249


>gi|15642195|ref|NP_231827.1| flagellar basal body rod protein FlgF [Vibrio cholerae O1 biovar El
           Tor str. N16961]
 gi|121586260|ref|ZP_01676050.1| flagellar basal-body rod protein FlgF [Vibrio cholerae 2740-80]
 gi|121726526|ref|ZP_01679775.1| flagellar basal-body rod protein FlgF [Vibrio cholerae V52]
 gi|147673274|ref|YP_001217713.1| flagellar basal body rod protein FlgF [Vibrio cholerae O395]
 gi|153213604|ref|ZP_01948877.1| flagellar basal-body rod protein FlgF [Vibrio cholerae 1587]
 gi|153817120|ref|ZP_01969787.1| flagellar basal-body rod protein FlgF [Vibrio cholerae NCTC 8457]
 gi|153820819|ref|ZP_01973486.1| flagellar basal-body rod protein FlgF [Vibrio cholerae B33]
 gi|153825314|ref|ZP_01977981.1| flagellar basal-body rod protein FlgF [Vibrio cholerae MZO-2]
 gi|153829346|ref|ZP_01982013.1| flagellar basal-body rod protein FlgF [Vibrio cholerae 623-39]
 gi|183179566|ref|ZP_02957777.1| flagellar basal-body rod protein FlgF [Vibrio cholerae MZO-3]
 gi|227082320|ref|YP_002810871.1| flagellar basal-body rod protein FlgF [Vibrio cholerae M66-2]
 gi|229507727|ref|ZP_04397232.1| flagellar basal-body rod protein FlgF [Vibrio cholerae BX 330286]
 gi|229512078|ref|ZP_04401557.1| flagellar basal-body rod protein FlgF [Vibrio cholerae B33]
 gi|229513840|ref|ZP_04403302.1| flagellar basal-body rod protein FlgF [Vibrio cholerae TMA 21]
 gi|229519214|ref|ZP_04408657.1| flagellar basal-body rod protein FlgF [Vibrio cholerae RC9]
 gi|229522145|ref|ZP_04411562.1| flagellar basal-body rod protein FlgF [Vibrio cholerae TM 11079-80]
 gi|229524191|ref|ZP_04413596.1| flagellar basal-body rod protein FlgF [Vibrio cholerae bv. albensis
           VL426]
 gi|229528799|ref|ZP_04418189.1| flagellar basal-body rod protein FlgF [Vibrio cholerae 12129(1)]
 gi|229607231|ref|YP_002877879.1| flagellar basal body rod protein FlgF [Vibrio cholerae MJ-1236]
 gi|254225802|ref|ZP_04919407.1| flagellar basal-body rod protein FlgF [Vibrio cholerae V51]
 gi|254849325|ref|ZP_05238675.1| flagellar basal-body rod protein FlgF [Vibrio cholerae MO10]
 gi|255747105|ref|ZP_05421050.1| flagellar basal-body rod protein FlgF [Vibrio cholera CIRS 101]
 gi|262161351|ref|ZP_06030461.1| flagellar basal-body rod protein FlgF [Vibrio cholerae INDRE 91/1]
 gi|262167778|ref|ZP_06035480.1| flagellar basal-body rod protein FlgF [Vibrio cholerae RC27]
 gi|262191688|ref|ZP_06049864.1| flagellar basal-body rod protein FlgF [Vibrio cholerae CT 5369-93]
 gi|297580842|ref|ZP_06942767.1| flagellar basal-body rod protein FlgF [Vibrio cholerae RC385]
 gi|298500426|ref|ZP_07010231.1| flagellar basal-body rod protein FlgF [Vibrio cholerae MAK 757]
 gi|9656752|gb|AAF95341.1| flagellar basal-body rod protein FlgF [Vibrio cholerae O1 biovar El
           Tor str. N16961]
 gi|121549526|gb|EAX59552.1| flagellar basal-body rod protein FlgF [Vibrio cholerae 2740-80]
 gi|121630979|gb|EAX63358.1| flagellar basal-body rod protein FlgF [Vibrio cholerae V52]
 gi|124115803|gb|EAY34623.1| flagellar basal-body rod protein FlgF [Vibrio cholerae 1587]
 gi|125621708|gb|EAZ50037.1| flagellar basal-body rod protein FlgF [Vibrio cholerae V51]
 gi|126512388|gb|EAZ74982.1| flagellar basal-body rod protein FlgF [Vibrio cholerae NCTC 8457]
 gi|126521611|gb|EAZ78834.1| flagellar basal-body rod protein FlgF [Vibrio cholerae B33]
 gi|146315157|gb|ABQ19696.1| flagellar basal-body rod protein FlgF [Vibrio cholerae O395]
 gi|148875187|gb|EDL73322.1| flagellar basal-body rod protein FlgF [Vibrio cholerae 623-39]
 gi|149740998|gb|EDM55067.1| flagellar basal-body rod protein FlgF [Vibrio cholerae MZO-2]
 gi|183012977|gb|EDT88277.1| flagellar basal-body rod protein FlgF [Vibrio cholerae MZO-3]
 gi|227010208|gb|ACP06420.1| flagellar basal-body rod protein FlgF [Vibrio cholerae M66-2]
 gi|227014092|gb|ACP10302.1| flagellar basal-body rod protein FlgF [Vibrio cholerae O395]
 gi|229332573|gb|EEN98059.1| flagellar basal-body rod protein FlgF [Vibrio cholerae 12129(1)]
 gi|229337772|gb|EEO02789.1| flagellar basal-body rod protein FlgF [Vibrio cholerae bv. albensis
           VL426]
 gi|229341070|gb|EEO06075.1| flagellar basal-body rod protein FlgF [Vibrio cholerae TM 11079-80]
 gi|229343903|gb|EEO08878.1| flagellar basal-body rod protein FlgF [Vibrio cholerae RC9]
 gi|229349021|gb|EEO13978.1| flagellar basal-body rod protein FlgF [Vibrio cholerae TMA 21]
 gi|229352043|gb|EEO16984.1| flagellar basal-body rod protein FlgF [Vibrio cholerae B33]
 gi|229355232|gb|EEO20153.1| flagellar basal-body rod protein FlgF [Vibrio cholerae BX 330286]
 gi|229369886|gb|ACQ60309.1| flagellar basal-body rod protein FlgF [Vibrio cholerae MJ-1236]
 gi|254845030|gb|EET23444.1| flagellar basal-body rod protein FlgF [Vibrio cholerae MO10]
 gi|255735507|gb|EET90907.1| flagellar basal-body rod protein FlgF [Vibrio cholera CIRS 101]
 gi|262023843|gb|EEY42542.1| flagellar basal-body rod protein FlgF [Vibrio cholerae RC27]
 gi|262028662|gb|EEY47316.1| flagellar basal-body rod protein FlgF [Vibrio cholerae INDRE 91/1]
 gi|262032427|gb|EEY50989.1| flagellar basal-body rod protein FlgF [Vibrio cholerae CT 5369-93]
 gi|297534668|gb|EFH73504.1| flagellar basal-body rod protein FlgF [Vibrio cholerae RC385]
 gi|297541119|gb|EFH77173.1| flagellar basal-body rod protein FlgF [Vibrio cholerae MAK 757]
 gi|327484715|gb|AEA79122.1| Flagellar basal-body rod protein FlgF [Vibrio cholerae LMA3894-4]
          Length = 249

 Score =  151 bits (380), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 57/241 (23%), Positives = 102/241 (42%), Gaps = 11/241 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  + ++      Q +   A+N++N  T GFR    +   +      +      F  
Sbjct: 1   MDRALFLAMSGAKQNMQAMQLRANNLANVSTTGFRADLAQARSM--QAYGEGLPSRVFSM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASG 119
           + +   +   GS I+TG +LD  ++GD W ++ +      LTR+G  ++ + G L++ +G
Sbjct: 59  TERPGHNFAQGSVITTGRDLDITIQGDGWISVLDKTGKEGLTRNGNLRIDETGLLLNGNG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172
            +PVL     PI +P       +G  G IS + +      +  VD         Q   + 
Sbjct: 119 -HPVLGETGAPITLPVPLNKVEIGGDGTISVRPQGAPADAMEVVDRIKLVRLNDQSLFKD 177

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            N       P T  E  + V +  G LE SN N++ EM  +I L ++F     ++   E+
Sbjct: 178 VNGLFRATDPNTQFEADASVKILTGALEGSNVNAIGEMTSLIDLQRQFEMQVKMMSTAEE 237

Query: 233 S 233
            
Sbjct: 238 M 238


>gi|167645396|ref|YP_001683059.1| flagellar basal body rod protein FlgG [Caulobacter sp. K31]
 gi|167347826|gb|ABZ70561.1| flagellar basal-body rod protein FlgG [Caulobacter sp. K31]
          Length = 262

 Score =  151 bits (380), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 41/259 (15%), Positives = 86/259 (33%), Gaps = 21/259 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             +         A +  +  +++N++N +TVGF+  + +F +++                
Sbjct: 1   MQALRTAATGMAAQQLNVEVISNNIANMNTVGFKRGRAEFQDLLYQTIERAGAQSSGDGN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q    V +G  Y   E G+   T  E D A++G  +  +  P      TR G F
Sbjct: 61  VVPTGVQVGGGVKTGSVYRIHEQGTPTMTNNEFDVAIQGKGFLQILLPSGETAYTRAGNF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFN-VGEKGEISQKGKVIATMGLYSVDM 165
              D G +V+  G      +                V  K + +   + +  + L +   
Sbjct: 121 STNDQGQIVTEDGYTVQPGITIPANATATIISKTGLVQVKMDGNPAPQTVGQLELANFMN 180

Query: 166 SQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     N+                      T+ + + E SN +S+ E+  +I   + +
Sbjct: 181 EGGLEAIGNNMYMETAASGAANIAAPGQQGFGTLLQNYTEASNVDSVSEITSLIVAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              + +I   ++ +     
Sbjct: 241 EMNSKVITTADQMLQTTSN 259


>gi|317153845|ref|YP_004121893.1| flagellar hook-basal body protein [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316944096|gb|ADU63147.1| flagellar hook-basal body protein [Desulfovibrio aespoeensis
           Aspo-2]
          Length = 257

 Score =  151 bits (380), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 58/258 (22%), Positives = 104/258 (40%), Gaps = 20/258 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-------- 52
           M+ S    L   L+ E R+S++A+N++N +T  F+   + F +V     +D         
Sbjct: 1   MRDSSLSALFGALSNEMRMSSIANNLANVNTTAFKKDHMAFHDVFTRFAHDYVVTTKSFL 60

Query: 53  --------DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDG 104
                    + ++      + +    G    TG +LDFAL G+ +F  +     + TR G
Sbjct: 61  RDQDLFPDPKIMAKARLSDQTVDFSQGGMHQTGNQLDFALSGEGFFKAQVGGDELYTRAG 120

Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
            F V  DG+LV+  G   +++   + +       +  V   G IS  G+      L + +
Sbjct: 121 NFLVDVDGTLVTQDGHPVMVEGGPLSV---PPGAVMTVESDGMISINGEPAGAFDLVTFE 177

Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224
              G  R  ++           E    +TV++GFLE  N   + EM QMI   + F+   
Sbjct: 178 DLGGMERVGSNFYRAPGDAAEAEP-EDLTVQQGFLEKGNVEVVTEMVQMIETQRAFDMYA 236

Query: 225 TLIDENEKSMLEAIRNIA 242
            ++   +      I  + 
Sbjct: 237 KVLQGTDSLDRNMITKVG 254


>gi|83720527|ref|YP_440802.1| flagellar basal body rod protein FlgF [Burkholderia thailandensis
           E264]
 gi|167617586|ref|ZP_02386217.1| flagellar basal body rod protein FlgF [Burkholderia thailandensis
           Bt4]
 gi|257140547|ref|ZP_05588809.1| flagellar basal body rod protein FlgF [Burkholderia thailandensis
           E264]
 gi|83654352|gb|ABC38415.1| flagellar basal-body rod protein FlgF [Burkholderia thailandensis
           E264]
          Length = 253

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 54/250 (21%), Positives = 85/250 (34%), Gaps = 10/250 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-----QK 55
           M       +       ++ S VA+N++N  T GFR     F  V    ++          
Sbjct: 1   MDRLIYTAMTGATQSLEQQSVVANNLANASTTGFRAQLATFRAVPMNFEDGSGNVDPATT 60

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSL 114
            ++  S         G    TG  LD A++G  W ++  P      TR G   V  +G L
Sbjct: 61  RTYTLSSTPGADFAPGPIERTGNPLDVAIQGPGWLSVMLPDGSEAYTRAGNLHVDQNGQL 120

Query: 115 VSASGKYPVLDMAS---VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171
           V+A+    V +       P           V           V     L  V+     ++
Sbjct: 121 VTANNLPVVGNGGPLAVPPNAQLTIGADGTVSALMPGDPPTAVAMIDQLKLVNPDPATMK 180

Query: 172 RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
           R + G+       P +    V V    LE SN N +  M  MI   + F   T LI   +
Sbjct: 181 RGDDGLFRTADGNPADADPAVKVVPNSLEGSNVNPVAAMVSMIDNARAFELQTKLIQSAD 240

Query: 232 KSMLEAIRNI 241
           ++  +A   +
Sbjct: 241 QN-EQAANQL 249


>gi|303239788|ref|ZP_07326312.1| fagellar hook-basal body protein [Acetivibrio cellulolyticus CD2]
 gi|302592725|gb|EFL62449.1| fagellar hook-basal body protein [Acetivibrio cellulolyticus CD2]
          Length = 259

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 53/263 (20%), Positives = 101/263 (38%), Gaps = 26/263 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  +      +  A  +++  +++N++N  T G++   V +     A+            
Sbjct: 1   MIRALYTSGWSMNANNKQMDVISNNLANVSTNGYKKDTVVYESFPNALVRRVNDTESTLN 60

Query: 49  -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFAL--EGDAWFALESPRG-----IIL 100
               +         G+ +     G   STG  LD A+     A+F +  P          
Sbjct: 61  PSGKVGDVQLGNDVGQVFTYYTSGQLASTGNNLDLAIGSSDSAFFTIGVPSENGELTEYY 120

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           TRDG F +     LV++ G   +         I  + E F+V + G I Q G+V+  + +
Sbjct: 121 TRDGSFCLNSAKQLVTSEGYMVMGTD----GPITLESENFSVLDDGSIVQNGQVVDKLAI 176

Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
                +    +   + I         E      VK+G+LE SN N + EM  MI + + +
Sbjct: 177 KDFTDTSTLRKFGENLIQTTEET--QEQEFNGVVKQGYLEQSNVNVVNEMINMITVMRAY 234

Query: 221 NSITTLIDENEKSMLEAIRNIAS 243
            S   +I   + ++ +A+  + +
Sbjct: 235 ESNQKVIQALDGTLEKAVNEVGA 257


>gi|94969950|ref|YP_591998.1| flagellar basal-body rod FlgG [Candidatus Koribacter versatilis
           Ellin345]
 gi|94552000|gb|ABF41924.1| Flagellar basal-body rod FlgG [Candidatus Koribacter versatilis
           Ellin345]
          Length = 263

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 46/258 (17%), Positives = 90/258 (34%), Gaps = 21/258 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK----------- 49
           M  +         A +  L  +A+N+SN  T GFR  +++F +++               
Sbjct: 1   MFRALYTAATGMTAQQLNLDNIANNLSNASTAGFRARRLQFQDLMYQNMVVPGSAATQQT 60

Query: 50  --NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                 Q             +  G F STG  LD A++G  +F +  P G    TR G+F
Sbjct: 61  TVASGLQVGLGTRPTASETLQTQGEFESTGNPLDIAIQGQGFFQVLLPDGTTGYTRSGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
            +   G++V++ G      +                V        + + + ++ + S   
Sbjct: 121 HLDAQGNVVTSDGNQLQPSLTIPADAQTISIGADGTVTVTQPGQTQAQQVGSIQVASFAN 180

Query: 166 SQGFVRRENSGISPNIP------PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
             G      +              TP       T+++G LE +N + + E  QMI   + 
Sbjct: 181 PGGLNSIGKNLFLATTASGDPTIGTPGGAEGAGTLQQGVLEQANVSVVDEFIQMILAQRS 240

Query: 220 FNSITTLIDENEKSMLEA 237
           + + + ++    + +   
Sbjct: 241 YEANSKVVTAANEMLQNL 258


>gi|302343756|ref|YP_003808285.1| flagellar basal-body rod protein FlgF [Desulfarculus baarsii DSM
           2075]
 gi|301640369|gb|ADK85691.1| flagellar basal-body rod protein FlgF [Desulfarculus baarsii DSM
           2075]
          Length = 231

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 56/242 (23%), Positives = 99/242 (40%), Gaps = 17/242 (7%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
                      L   + +   A+N++N  T GF+  ++ F +++                
Sbjct: 4   DQGLADAACGSLMQIRHMDVTANNLANVSTTGFKGDRLIFDDMLSR-------------- 49

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
            +  +    GS   TG  LD AL GD +F + +P G  LTR G FK+  +G+LV++ G  
Sbjct: 50  -EMQVDFSQGSLQETGNPLDVALSGDGFFMIRTPGGDRLTRSGAFKMDANGALVTSEGHA 108

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR-ENSGISPN 180
             LD A  P+ +        +  +G +SQ G  +AT+ +  V       +    +    +
Sbjct: 109 V-LDSAGQPVTLNPSGGQVFIDSEGNVSQDGAQVATLAVVEVQNKAALQKDGRTAFSGAD 167

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
               P    + V V +G LE SN   + +M  MI   + F S    +   ++   +A+  
Sbjct: 168 GQLPPTAPAADVVVNQGSLEMSNVTVVDQMVNMITAQRAFESYQKAVHSLQEIDQKAVSQ 227

Query: 241 IA 242
           + 
Sbjct: 228 VG 229


>gi|161367438|ref|YP_868965.2| flagellar basal body rod protein FlgF [Shewanella sp. ANA-3]
          Length = 247

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 48/238 (20%), Positives = 90/238 (37%), Gaps = 7/238 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     I ++        L+  A+N++N +T GF++   +   +      +      F  
Sbjct: 1   MDKFLYISMSGAKQNMNELALRANNLANANTDGFKSDMAQARSM--QAFGEGLPTRVFAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASG 119
                 +   G   STG +LD A++GD WFA++        TR G       G L +  G
Sbjct: 59  VETPSANFRSGPIKSTGRDLDVAIKGDGWFAVQAQDGSEAYTRSGSLSFDSTGLLHNDRG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
              + D   + + +P +    +      +  +G     +        V+     + R   
Sbjct: 119 NPVMGDAGPIVLPLPIEKVTISQDGIISVRPQGATTEVVEEVGRLKLVNPGNAQMMRGED 178

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           G+   +   P      V V+ G +E SN N + EM  +I L ++F     ++   E++
Sbjct: 179 GLFRLVSGDPAPADPSVFVESGAVEGSNVNPVDEMVSLIDLQRQFELQVKMMKTAEEN 236


>gi|15644291|ref|NP_229343.1| flagellar basal-body rod protein FlgF [Thermotoga maritima MSB8]
 gi|170288995|ref|YP_001739233.1| hypothetical protein TRQ2_1206 [Thermotoga sp. RQ2]
 gi|281412685|ref|YP_003346764.1| flagellar basal-body rod protein FlgF [Thermotoga naphthophila
           RKU-10]
 gi|4982110|gb|AAD36610.1|AE001800_20 flagellar basal-body rod protein FlgF [Thermotoga maritima MSB8]
 gi|170176498|gb|ACB09550.1| protein of unknown function DUF1078 domain protein [Thermotoga sp.
           RQ2]
 gi|281373788|gb|ADA67350.1| flagellar basal-body rod protein FlgF [Thermotoga naphthophila
           RKU-10]
          Length = 249

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 49/257 (19%), Positives = 99/257 (38%), Gaps = 24/257 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS-----EVVGAIKNDIDQK 55
           M           L    +L  +A++++N DT G++  +  F      EV     N ++ +
Sbjct: 1   MTRGIYNAAMGMLVDMAKLDRIANDLANVDTAGYKQDREAFRAYLRREVFRQEPNPVESR 60

Query: 56  ISFVAS---------GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106
              V            +       G    T      A+ G+ +F +E   G   TR+G F
Sbjct: 61  TKKVPIGPLEYATVLDEVRTDLSQGPVEETDVPYHLAINGEGFFRIEFNGGEYYTRNGEF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
            V  +G +V+  G Y  LD     ++      +   G        G ++  +G+Y+++  
Sbjct: 121 TVNSEGYIVTNYGGYL-LDENGERVRFFDDFTVDEEGYV--RDAYGNIVTRIGVYNLENP 177

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
           + F     +G +P+             + +G++E SN +++  M  MI   + +      
Sbjct: 178 EKFGNTLFTGENPS-------PSENFRIMQGYVEKSNVDALKAMVDMISAMRHYELSQRA 230

Query: 227 IDENEKSMLEAIRNIAS 243
           +  N++   + I ++AS
Sbjct: 231 VTVNDELNGKLINSLAS 247


>gi|161349955|ref|YP_733400.2| flagellar basal body rod protein FlgF [Shewanella sp. MR-4]
 gi|161367434|ref|YP_737389.2| flagellar basal body rod protein FlgF [Shewanella sp. MR-7]
          Length = 247

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 90/238 (37%), Gaps = 7/238 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     I ++        L+  A+N++N +T GF++   +   +      +      F  
Sbjct: 1   MDKFLYISMSGAKQNMNELALRANNLANANTDGFKSDMAQARSM--QAFGEGLPSRVFAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASG 119
                 +   G   +TG +LD A++GD WFA++        TR G       G L +  G
Sbjct: 59  VETPSANFRAGPIKTTGRDLDVAIKGDGWFAVQAKDGSEAYTRSGSLSFDSTGLLHNDRG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
              + D   + + +P +    +      +  +G     +        V+     + R   
Sbjct: 119 NPVMGDAGPIVLPLPIEKVTISQDGIISVRPQGATTEVIEEVGRLKLVNPGNAQMMRGED 178

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           G+   +   P      V V+ G +E SN N + EM  +I L ++F     ++   E++
Sbjct: 179 GLFRLVSGDPAPADPNVFVESGAVEGSNVNPVDEMVSLIDLQRQFELQVKMMKTAEEN 236


>gi|257871297|ref|ZP_05650950.1| flagellar hook protein [Enterococcus gallinarum EG2]
 gi|257805461|gb|EEV34283.1| flagellar hook protein [Enterococcus gallinarum EG2]
          Length = 312

 Score =  150 bits (378), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 50/295 (16%), Positives = 109/295 (36%), Gaps = 56/295 (18%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50
           M  S   G++    L+ ++  V++N++N +TVGF++ +V F +++    +          
Sbjct: 15  MLRSLYSGVSGMKNLQTKMDVVSNNIANVNTVGFKSSRVLFQDMMSQTMSNATAPGNGLG 74

Query: 51  --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---RGIILTRDGR 105
             +  Q    V +G       VG+  STG  +DF + G  +F ++ P        TRDG 
Sbjct: 75  GINATQIGLGVQTGSIDTINTVGAPQSTGRSMDFYISGQGYFMVQGPGANGETYYTRDGA 134

Query: 106 FKVTDDGSLVSASGKYPVL-DMASVPIQIPQKDEIFNVGEKGEIS--------------- 149
           F    +G+L ++ G   +   +      +   +   N    G+ +               
Sbjct: 135 FVRDSNGTLTNSDGMQVLGRSVTGGQPVVYDDNFDENTALSGQETVSPLSIPSTLTVNGE 194

Query: 150 --------------------QKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP-----T 184
                                +  V+  +G+ + +  +G  +   +              
Sbjct: 195 TLTYNSMAIDANGLVLAKYGNQTFVMGKVGVATFNNPEGLEKVGGNNYVQTSNSGNPIVA 254

Query: 185 PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              +    T++ G LE SN +   E  +MI  ++ + + +  I  +++ + E + 
Sbjct: 255 GPGNNGAGTLQAGALEMSNVDLSTEFTEMIIASRAYQANSRSITTSDEMLQELLN 309


>gi|329888225|ref|ZP_08266823.1| flagellar basal-body rod protein FlgF [Brevundimonas diminuta ATCC
           11568]
 gi|328846781|gb|EGF96343.1| flagellar basal-body rod protein FlgF [Brevundimonas diminuta ATCC
           11568]
          Length = 245

 Score =  150 bits (378), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 66/245 (26%), Positives = 117/245 (47%), Gaps = 6/245 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK--NDIDQKISF 58
           M+ +  IGL+ Q+ L + L  VA+N++N DT GF+  ++     VG     ++I    SF
Sbjct: 1   MENAAYIGLSRQMTLRRELDIVANNVANADTTGFKVEQLMVGTEVGQRARNDNIRPSASF 60

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGD-AWFALESPRGIILTRDGRFKVTDDGSLVSA 117
           V           G+   TG ELDF +EG+ A+F +++P G   TRDG F    +G L + 
Sbjct: 61  VLDKGVGRDFGQGTLKQTGRELDFGIEGEGAFFTVQTPSGPAYTRDGAFVTDPEGRLTTK 120

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177
            G   + D     I +  +    +VG  G ISQ+G+ +  + +   D      ++   G+
Sbjct: 121 QGLPVLAD--GAEIVLDPQRGPASVGADGTISQEGQPVGRLTVVRFDALSVL-QKSGDGL 177

Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
             N       D +   V++G LE SN N++ E+  +I +++ +  +T +I+        +
Sbjct: 178 YRNASNAQPMDATDAQVRQGMLEGSNVNTLVEITNLIEISRAYERVTKMIENANDLSRRS 237

Query: 238 IRNIA 242
           +  + 
Sbjct: 238 VERLG 242


>gi|291540627|emb|CBL13738.1| fagellar hook-basal body proteins [Roseburia intestinalis XB6B4]
          Length = 272

 Score =  150 bits (378), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 46/269 (17%), Positives = 98/269 (36%), Gaps = 30/269 (11%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--------- 51
           M  +        +A +  +  +++N+SN +TVG++  K++F  ++               
Sbjct: 1   MMRALYTAATGMIAQQSNVDNISNNLSNVNTVGYKQEKMEFKSLLYQTIQTRTTSANGEE 60

Query: 52  ---IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFK 107
                Q                GS +++    DFA+ GD +FA+  +      TR G F 
Sbjct: 61  KPISAQVGLGTRVASNTSIYTQGSLMASENATDFAISGDGFFAVRGADGKTYYTRAGDFV 120

Query: 108 VT-----------DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156
            +           ++G  V  S   P+   A +  +     E   +G          +  
Sbjct: 121 WSVNAGGTLTLCTNEGYPVLDSNNQPINLPAGISAEKVIVSENGKMGYTNAAGTYVDMNQ 180

Query: 157 TMGLYSVDMSQGFVRRENSGISPN------IPPTPLEDLSGVTVKRGFLEDSNANSMYEM 210
           T+GL+  +   G  +   + ++        +  +   +L+   V + +LE SN     EM
Sbjct: 181 TIGLFQFNNPGGLEKTGTNLLAVTPASGNAMNESTTANLTKSKVLQKYLEGSNVQVADEM 240

Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             +I   + +   +  I  +++ + +A  
Sbjct: 241 VNLIIAQRAYQLNSKAITTSDEMLEQANN 269


>gi|240144760|ref|ZP_04743361.1| flagellar basal-body rod protein FlgG [Roseburia intestinalis
           L1-82]
 gi|257203281|gb|EEV01566.1| flagellar basal-body rod protein FlgG [Roseburia intestinalis
           L1-82]
 gi|291534610|emb|CBL07722.1| fagellar hook-basal body proteins [Roseburia intestinalis M50/1]
          Length = 272

 Score =  150 bits (378), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 46/269 (17%), Positives = 98/269 (36%), Gaps = 30/269 (11%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--------- 51
           M  +        +A +  +  +++N+SN +TVG++  K++F  ++               
Sbjct: 1   MMRALYTAATGMIAQQSNVDNISNNLSNVNTVGYKQEKMEFKSLLYQTIQTRTTSANGEE 60

Query: 52  ---IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFK 107
                Q                GS +++    DFA+ GD +FA+  +      TR G F 
Sbjct: 61  KPISAQVGLGTRVASNTSIYTQGSLMASENATDFAISGDGFFAVRGADGKTYYTRAGDFV 120

Query: 108 VT-----------DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156
            +           ++G  V  S   P+   A +  +     E   +G          +  
Sbjct: 121 WSVNAGGTLTLCTNEGYPVLDSNNQPINLPAGISAEKVIVSENGKMGYTNAAGTYVDMNQ 180

Query: 157 TMGLYSVDMSQGFVRRENSGISPN------IPPTPLEDLSGVTVKRGFLEDSNANSMYEM 210
           T+GL+  +   G  +   + ++        +  +   +L+   V + +LE SN     EM
Sbjct: 181 TIGLFQFNNPSGLEKTGTNLLAVTPASGNAMNESTTANLTKSKVLQKYLEGSNVQVADEM 240

Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             +I   + +   +  I  +++ + +A  
Sbjct: 241 VNLIIAQRAYQLNSKAITTSDEMLEQANN 269


>gi|90411006|ref|ZP_01219020.1| putative flagellar basal-body rod protein FlgF [Photobacterium
           profundum 3TCK]
 gi|90328219|gb|EAS44530.1| putative flagellar basal-body rod protein FlgF [Photobacterium
           profundum 3TCK]
          Length = 249

 Score =  150 bits (378), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 59/243 (24%), Positives = 98/243 (40%), Gaps = 11/243 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  + ++        + T A+N++N  T GFR    +   +      +      F  
Sbjct: 1   MDRALYLAMSGAKQDMYGMQTHANNLANVRTTGFRADLEQARSM--QAYGEGLPSRVFAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           + +       GS ++TG +LD A+EGD W A+         TR G  K+ + G L +++G
Sbjct: 59  TERPGQDFSQGSVMTTGRDLDVAVEGDGWLAVLDASGQEAYTRAGHLKIDETGMLQNSNG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172
              +L     PI IP       VG  G IS   +      +  VD        ++   + 
Sbjct: 119 N-LMLGENGGPIFIPLPINKIQVGNDGTISVLPQGAPPDAMEIVDRLKLVRPDNRDLFKD 177

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            N       P    +  +GVT+ +G LE SN N++ EM  MI L + F     ++   E+
Sbjct: 178 VNGLFKSKTPGETYDADAGVTLLKGALEGSNVNAVGEMTSMIDLQRHFEMQVKIMKTAEE 237

Query: 233 SML 235
              
Sbjct: 238 MDQ 240


>gi|168182721|ref|ZP_02617385.1| flagellar basal body rod protein [Clostridium botulinum Bf]
 gi|237796077|ref|YP_002863629.1| flagellar basal body rod protein FlgG [Clostridium botulinum Ba4
           str. 657]
 gi|182674133|gb|EDT86094.1| flagellar basal body rod protein [Clostridium botulinum Bf]
 gi|229261217|gb|ACQ52250.1| flagellar basal body rod protein [Clostridium botulinum Ba4 str.
           657]
          Length = 263

 Score =  150 bits (378), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 51/264 (19%), Positives = 106/264 (40%), Gaps = 24/264 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI----------KN 50
           M  +     +  +A + +L ++++N++N +TVG++   V F E+V             + 
Sbjct: 1   MLRALWNSKSGLIAQQNKLDSISNNLANVNTVGYKREDVSFQELVQETLKRKGYPTSDRP 60

Query: 51  DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVT 109
           +I       A+     + + G  ++TG + D A++G  +F +    G     R G F + 
Sbjct: 61  EIQTGTGVKATNWIRDTHQQGILLNTGNKTDLAIDGQGFFRVIMSDGNYAYERSGNFVID 120

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-----------IATM 158
            +G LV  +G    + +                     I++ G +           +  +
Sbjct: 121 RNGMLVDENGNRLEIQLQQPAGGQILNRIGGFSKNNINIAEDGSISVKDIDGINKMVGKI 180

Query: 159 GLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
            +Y+   S  FV    +   P      +   + V++ +GFLE+SN ++  EM +MI   +
Sbjct: 181 NIYNAVGSDAFVSIGRNLYIPQ-EGVNVFANNDVSILQGFLENSNVDAGKEMTEMIITQR 239

Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242
            F   +  I   ++ M   + N+ 
Sbjct: 240 AFELSSRGIKTADE-MWGIVNNMR 262


>gi|322806967|emb|CBZ04537.1| flagellar basal-body rod protein FlgG [Clostridium botulinum H04402
           065]
          Length = 263

 Score =  150 bits (378), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 52/264 (19%), Positives = 106/264 (40%), Gaps = 24/264 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI----------KN 50
           M  +     +  +A + +L ++++N++N +TVG++   V F E+V             + 
Sbjct: 1   MLRALWNSKSGLIAQQNKLDSISNNLANVNTVGYKREDVSFQELVQETLKRKGYPTSDRP 60

Query: 51  DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVT 109
           +I       A+     + + G  ++TG + D A++G  +F +    G     R G F V 
Sbjct: 61  EIQTGTGVKATNWIRDTHQQGILLNTGNKTDLAIDGQGFFRVIMADGNYAYERSGNFVVD 120

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-----------IATM 158
            +G LV  +G    + +                     I++ G +           +  +
Sbjct: 121 RNGMLVDENGNRLEIQLQQPAGGQILNRIGGFSKNNINIAEDGSISVKDIDGINKMVGKI 180

Query: 159 GLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
            +Y+   S  FV    +   P      +   + V++ +GFLE+SN ++  EM +MI   +
Sbjct: 181 NIYNAVGSDAFVSIGRNLYIPQ-EGVNVFTNNDVSILQGFLENSNVDAGKEMTEMIITQR 239

Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242
            F   +  I   ++ M   + N+ 
Sbjct: 240 AFELSSRGIKTADE-MWGIVNNMR 262


>gi|257866386|ref|ZP_05646039.1| flagellar hook protein [Enterococcus casseliflavus EC30]
 gi|257873098|ref|ZP_05652751.1| flagellar hook protein [Enterococcus casseliflavus EC10]
 gi|257875999|ref|ZP_05655652.1| flagellar hook protein [Enterococcus casseliflavus EC20]
 gi|257800344|gb|EEV29372.1| flagellar hook protein [Enterococcus casseliflavus EC30]
 gi|257807262|gb|EEV36084.1| flagellar hook protein [Enterococcus casseliflavus EC10]
 gi|257810165|gb|EEV38985.1| flagellar hook protein [Enterococcus casseliflavus EC20]
          Length = 312

 Score =  150 bits (378), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 49/295 (16%), Positives = 105/295 (35%), Gaps = 56/295 (18%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50
           M  S   G++    L+ ++  V++N++N +TVGF++ +V F +++    +          
Sbjct: 15  MLRSLYSGVSGMKNLQTKMDVVSNNIANVNTVGFKSSRVLFQDMMSQTMSNATAPGNGLG 74

Query: 51  --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---RGIILTRDGR 105
             +  Q    V +G       VG+  STG  +DF + G  +F ++ P        TRDG 
Sbjct: 75  GINATQIGLGVQTGSIDTINTVGAPQSTGRSMDFYISGQGYFMVQGPGANGETYYTRDGA 134

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEIS---------------- 149
           F    +G+L ++ G   +    +    +   D                            
Sbjct: 135 FVRDSNGTLTNSDGMQVLGRSVNGGQPVVYDDNFDENTALSGQDAVSPLSIPSTLTVNGE 194

Query: 150 --------------------QKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP-----T 184
                                +  V+  +G+ + +  +G  +   +              
Sbjct: 195 TLTYNSMAIDANGLVLAKYGNQTFVMGKVGVATFNNPEGLEKVGGNNYIQTSNSGNPIVA 254

Query: 185 PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              +    T++ G LE SN +   E  +MI  ++ + + +  I  +++ + E + 
Sbjct: 255 GPGNNGAGTLQAGALEMSNVDLSTEFTEMIIASRAYQANSRSITTSDEMLQELLN 309


>gi|253681880|ref|ZP_04862677.1| flagellar basal body rod protein FlgG [Clostridium botulinum D str.
           1873]
 gi|253561592|gb|EES91044.1| flagellar basal body rod protein FlgG [Clostridium botulinum D str.
           1873]
          Length = 263

 Score =  150 bits (378), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 51/265 (19%), Positives = 109/265 (41%), Gaps = 27/265 (10%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVV----------GA 47
           M       ++  +  E     +++N++N+ TVG++   +    F +V+            
Sbjct: 1   MIRGIYTAVSGLINQEAIQDVISNNLANSTTVGYKKDDLITRKFQDVMLHNYDKVVRGKN 60

Query: 48  IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF----ALESPRGIILTRD 103
           ++NDI +        +   +   G    TG   DFA++G+ +F            + TRD
Sbjct: 61  VRNDIGELSMGSKIDETCTNYSQGVLEDTGKSTDFAIQGNGFFVVSRNDRVNNQNLYTRD 120

Query: 104 GRFKVTDDGSLVSASGKYPVLDMAS------VPIQIPQKDEIFNVGEKGEISQKGKVIAT 157
           G F +  +G LV+ SG   +    +      + I +          + GEI   GK    
Sbjct: 121 GHFHIDRNGYLVNGSGDKVMGKNLTNGAISPINILVNNSPARMACNDMGEIYLNGKPAFK 180

Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217
           + + + +  +   + +++  S   P    ++ + V VK+ +LE SN N M E+  M+   
Sbjct: 181 IQVVNFENYKSLRKIQDNLYSGTNP----KETNDVIVKQNYLEKSNVNVMAEVSDMMMTM 236

Query: 218 QKFNSITTLIDENEKSMLEAIRNIA 242
           + F S   ++   ++++ + +  + 
Sbjct: 237 RNFESNQKVVQALDETLGKTVNEVG 261


>gi|124516714|gb|EAY58222.1| putative flagellar basal body rod protein [Leptospirillum rubarum]
          Length = 267

 Score =  150 bits (378), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 52/265 (19%), Positives = 101/265 (38%), Gaps = 26/265 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK----------- 49
           M+ +    ++   A EQ +  + +N++N +T GF+  +V F   +   +           
Sbjct: 1   MRQAEFALVSGAQAQEQLMDVLTNNLANVNTPGFKRDRVTFRTYLPHREWLHKTPSDQPG 60

Query: 50  -------------NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR 96
                            + +        ++    GSF STG  LD A++G+ +F + +PR
Sbjct: 61  FRMTPWGEFPTPWGMAGKDVPHAGVDGIHVGYAQGSFRSTGNPLDVAIKGEGFFRILTPR 120

Query: 97  GIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156
           G +L+R+GRF +   G LV+  G   + +                V   G + +  +V+ 
Sbjct: 121 GEVLSRNGRFTLDRGGRLVTHEGYGVLGEDGKNIRLPESVPGGVRVKADGTVLKGNRVMG 180

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
            + +   +   G + +   G+      T         V  G  E SN N  +EM +MI  
Sbjct: 181 RLAVVVPENGTGHLAKVGDGLFMADGKTAPVADPD--VLAGGFESSNVNGTFEMVRMIEA 238

Query: 217 TQKFNSITTLIDENEKSMLEAIRNI 241
            + F +    +    +     + +I
Sbjct: 239 MRSFETHLKALQTLNELTRRTVNDI 263


>gi|332980934|ref|YP_004462375.1| flagellar hook-basal body protein [Mahella australiensis 50-1 BON]
 gi|332698612|gb|AEE95553.1| flagellar hook-basal body protein [Mahella australiensis 50-1 BON]
          Length = 264

 Score =  150 bits (378), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 52/264 (19%), Positives = 101/264 (38%), Gaps = 23/264 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--------- 51
           M  +     A  ++ +  + T+A+N++N DT  F+       ++    K +         
Sbjct: 1   MIQALWTAGAGLISQQYNVDTIANNIANVDTTAFKRNTAHIEDMPYVYKLNPAIRQADNE 60

Query: 52  --IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKV 108
             +    +             G    T   LD  ++G A+FA+   +  +  TRDG FK+
Sbjct: 61  GLLPHMGTGARVVSSPKYFAQGPMQQTERNLDLGIDGTAFFAVTDGQGNVFYTRDGNFKL 120

Query: 109 TDD-------GSLVSASGKYPVLDMASVPIQIP--QKDEIFNVGEKGEISQKGKVIATMG 159
           T+         S ++ +  Y +LD     I+IP    +   ++   G +  +G  IA + 
Sbjct: 121 TETEGEDGRIHSYITTANGYWLLDTEGARIEIPAGTIEGDISIDPSGAVMVEGAHIADIA 180

Query: 160 LYSVDMSQGFVRRENSGISPNIPPTPLE-DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
           L      Q    R ++  +      P         V++GFLE SN +   EM +MI   +
Sbjct: 181 LVEFTNPQALETRGDNLYAVTDNVGPNYLTDGDSKVRQGFLEASNVDIADEMARMIRAQR 240

Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242
            +     ++   ++ +     +I 
Sbjct: 241 AYQLNARVLQTADEMIG-LANSIR 263


>gi|289523333|ref|ZP_06440187.1| flagellar basal-body rod protein FlgG [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
 gi|289503025|gb|EFD24189.1| flagellar basal-body rod protein FlgG [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
          Length = 256

 Score =  150 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 48/257 (18%), Positives = 90/257 (35%), Gaps = 17/257 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVV-----------G 46
           M        +A L  E+ +   ++N++N DT GF+        F EV+            
Sbjct: 1   MFRGLYGASSAMLVQEKVIDVASNNLANVDTAGFKRRISVNKSFPEVMIERREAVGPFER 60

Query: 47  AIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGR 105
            +   I      V   +  +    G  +ST   LD A+ G  +F+L      I  +R G 
Sbjct: 61  QVYWPIGSASLNVVLSETTVDLSEGQVVSTDNPLDVAISGRGFFSLRDGAGNIFYSRAGN 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           F +  +G +V+  G   + D                + E+G +   G+++  + L+    
Sbjct: 121 FTLDANGFIVNQEGLTLLGDGGVPINV--GDVSSVAIDERGTVVADGEILGAIQLFEFAN 178

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225
                    +    N        +    +  G LE SN N +YEM ++I   + + +   
Sbjct: 179 PTYLRNYAKNLFQANEAAGEPVLVETPMLVPGALEKSNVNVVYEMVRLIEGQRAYEASAR 238

Query: 226 LIDENEKSMLEAIRNIA 242
            +   ++     I    
Sbjct: 239 TLTMQDEQTGSMINTYG 255


>gi|24374756|ref|NP_718799.1| flagellar basal body rod protein FlgF [Shewanella oneidensis MR-1]
 gi|24349420|gb|AAN56243.1|AE015761_13 flagellar basal-body rod protein FlgF [Shewanella oneidensis MR-1]
          Length = 247

 Score =  150 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 49/238 (20%), Positives = 92/238 (38%), Gaps = 7/238 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     I ++        L+  A+N++N +T GF++   +   +      +      F  
Sbjct: 1   MDKFLYISMSGAKQNMNELALRANNLANANTDGFKSDMAQARSM--QAFGEGLPTRVFAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASG 119
                 +   G   STG +LD A++GD WFA++        TR G       G L +  G
Sbjct: 59  VETPSANFRSGPIKSTGRDLDVAIKGDGWFAVQAQDGSEAYTRSGSLSFDSTGLLHNDRG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
              + D   + + +P +    +      +  +G     +        V+     + R   
Sbjct: 119 NPVMGDAGPIVLPLPIEKVTISQDGIISVRPQGATTEVVEEVGRLKLVNPGNAQMMRGED 178

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           G+   +   P      V+V+ G +E SN NS+ EM  +I L ++F     ++   E++
Sbjct: 179 GLFRLVSGDPAPADPSVSVESGAVEGSNVNSVDEMVSLIDLQRQFELQVKMMKTAEEN 236


>gi|74317651|ref|YP_315391.1| flagellar basal body rod protein FlgF [Thiobacillus denitrificans
           ATCC 25259]
 gi|74057146|gb|AAZ97586.1| flagellar basal body rod protein FlgF [Thiobacillus denitrificans
           ATCC 25259]
          Length = 246

 Score =  150 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 55/245 (22%), Positives = 99/245 (40%), Gaps = 6/245 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       +       ++ +T + N++N  T GFR    +F  V   ++  I    +FV 
Sbjct: 1   MDRLIYTAMTGAKHALEQQATTSHNLANATTTGFRAQIDQFRAV--PVQGAILPTRAFVV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
                     G+   TG ELD A++GD W A+++P      TR+G  K+ ++G L++  G
Sbjct: 59  DSTTGSDFRSGAIQHTGRELDMAVQGDGWIAVQAPDGSEAYTRNGSLKLDENGVLLTRDG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG---LYSVDMSQGFVRRENSG 176
              + D   + I   +   +   G    +              +  V+   G + R + G
Sbjct: 119 LQVMGDGGPLSIPPGRNVAVGKDGTISLVPDGSAATGLTSIGRMKLVNPPAGDLVRGDDG 178

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           +         +    V +  G LE SN N + EM  MI L ++F+    L+   E +  +
Sbjct: 179 LFRLKDGGAADVDPKVALIGGALESSNVNVVDEMVNMISLARQFDMHMKLLQHAENNDSK 238

Query: 237 AIRNI 241
           A + +
Sbjct: 239 AAQLL 243


>gi|301168505|emb|CBW28095.1| flagellar basal-body rod protein [Bacteriovorax marinus SJ]
          Length = 261

 Score =  150 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 44/262 (16%), Positives = 89/262 (33%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  + N       A E  +ST+++N++N +T G++  + +  ++      +         
Sbjct: 1   MLRALNTAATGMAAQEMNVSTISNNIANVNTTGYKKQRTEIQDLSYQTIQEAGSRSSADT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  S             GS   T    D  + G+ +F +  P      TRDG F
Sbjct: 61  MNNVGVQIGSGAKVSGVRKEFTQGSQQITNNPYDLMISGEGFFGIMMPNNEVRYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
            V   G+LV+  G          P            V        +  ++  + +++   
Sbjct: 121 SVDASGTLVNKQGYRVFPSFVFPPGTKSVHIAHDGTVEAYLSNQIEPTILGQIPVFTFIN 180

Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +  +                +  T+ +G LE SN + M EM  +I   + +
Sbjct: 181 PVGLKSTGMNLYTITRSSGQAIQNIAGNANAGTIAQGALESSNVSIMNEMTSLIKAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNIA 242
              + ++   ++ + + + NI 
Sbjct: 241 EMNSKVMGVADQML-QTVNNIR 261


>gi|85706167|ref|ZP_01037262.1| flagellar basal-body rod protein FlgG [Roseovarius sp. 217]
 gi|85669331|gb|EAQ24197.1| flagellar basal-body rod protein FlgG [Roseovarius sp. 217]
          Length = 261

 Score =  150 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 42/256 (16%), Positives = 93/256 (36%), Gaps = 21/256 (8%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID----------- 53
             I      A + R+ T+++N++N  T G+   + +F+++                    
Sbjct: 4   LKIAATGMAAQQMRVETISNNLANMSTTGYNARRAEFADLHYQQLARAGTINATDGTVLP 63

Query: 54  ---QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVT 109
              Q    V      +    GS   T  +LD A+EG+ +  +  P G    TRDG  K +
Sbjct: 64  TGVQLGLGVRPAAISVQLAQGSLSQTNGDLDVAIEGNGYLEVTLPSGQAAYTRDGALKRS 123

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE-KGEISQKGKVIATMGLYSVDMSQG 168
            DG +V++ G     ++                     + + + + +  + L      +G
Sbjct: 124 ADGIIVNSEGFPVAPEITIPEDARSITINAEGEVFAFFQDNAEAQQLGQLDLAGFSNPKG 183

Query: 169 FVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223
                ++         P            T+++G+LEDS+ + + E+ ++I   + +   
Sbjct: 184 LEAIGSNLFVETEASGPANVTTAGQDGLGTLRQGYLEDSSVDPVREITELIEAQRGYELN 243

Query: 224 TTLIDENEKSMLEAIR 239
             +I   ++ +    +
Sbjct: 244 AKVITAADQMLSATTQ 259


>gi|331005440|ref|ZP_08328819.1| Flagellar basal-body rod protein flgG [gamma proteobacterium
           IMCC1989]
 gi|330420716|gb|EGG95003.1| Flagellar basal-body rod protein flgG [gamma proteobacterium
           IMCC1989]
          Length = 258

 Score =  150 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 45/258 (17%), Positives = 90/258 (34%), Gaps = 17/258 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------D 51
           M  +FNI      + + ++ T+A+N+SN +T G++  KV F ++V               
Sbjct: 1   MLDAFNISATGLQSQQTQVETIANNLSNVNTDGYKKSKVIFQDIVSKQLGINTNGLINQA 60

Query: 52  IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTD 110
            +      ++         G   +T   LD  ++G  +  +  P G    TR G   V +
Sbjct: 61  SNNTGIGSSANLINKIFTGGDPKATDRPLDIFIQGSGFLEVVMPDGRYGYTRVGNLNVDE 120

Query: 111 DGSLVSASGKYPV-LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169
           +G L ++ G     L       Q    D    V            +  + L +     G 
Sbjct: 121 NGVLTNSDGFSLSSLVQIPPDAQDIVIDSEGTVSVSVSGETDLVPVGQLELSTFLNESGL 180

Query: 170 VRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224
                    P++                T+++GF+E SN N + E+  ++   + +    
Sbjct: 181 SSLGGGIYLPSLKSGDPSYGQPGEIGFGTLQQGFIESSNVNLVEELTSLMSAQRGYELNA 240

Query: 225 TLIDENEKSMLEAIRNIA 242
            ++   +  +   I  + 
Sbjct: 241 RVVQAADDML-SIINTLR 257


>gi|146293689|ref|YP_001184113.1| flagellar basal body rod protein FlgF [Shewanella putrefaciens
           CN-32]
 gi|145565379|gb|ABP76314.1| flagellar basal-body rod protein FlgF [Shewanella putrefaciens
           CN-32]
 gi|319427088|gb|ADV55162.1| flagellar basal-body rod protein FlgF [Shewanella putrefaciens 200]
          Length = 247

 Score =  150 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 45/238 (18%), Positives = 86/238 (36%), Gaps = 7/238 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     I ++        L+   +N++N +T GF++   +   +      +      F  
Sbjct: 1   MDKFLYISMSGAKQNMHELALRGNNLANANTDGFKSDMAQARSM--QAFGEGLPTRVFAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASG 119
                 +   G   +TG +LD A++GD WFA++        TR G       G L +  G
Sbjct: 59  IETPSANFRSGPIKTTGRDLDVAIKGDGWFAVQAKDGAEAYTRSGSLSFDATGLLHNDRG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
              + D   + + +P      +      +  +G     +        V+     + R   
Sbjct: 119 NPVMGDAGPIVLPLPIDKVTISQDGIISVRPQGATAEVIEEVGRLKLVNPGNAQMMRGED 178

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           G+   +          V V+ G +E SN N + EM  +I L ++F     ++   E+ 
Sbjct: 179 GLFRLVSGNDAPADPNVAVESGAVEGSNVNPVDEMVSLIELQRQFEMQVKMMKTAEEI 236


>gi|254496889|ref|ZP_05109737.1| flagellar basal body rod protein FlgG [Legionella drancourtii
           LLAP12]
 gi|254353908|gb|EET12595.1| flagellar basal body rod protein FlgG [Legionella drancourtii
           LLAP12]
          Length = 261

 Score =  150 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 43/261 (16%), Positives = 92/261 (35%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           MQ +  +  +   A E+ ++T+A+N++N +T G++  + +F +++    +    +     
Sbjct: 1   MQPALWVSKSGLEAQEKTIATIANNLANVNTTGYKKDRAQFEDLLYQNTSQAGAQSSENS 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                    + V         E GS   T    D A++G  +F +  P G    TR+G F
Sbjct: 61  IIPTGINTGTGVHLVSTQKLFEQGSIQHTNNAYDVAIQGQGFFTILMPDGTQAYTRNGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
            +   G +V + G      +      +     +   V      S     + T+ L +   
Sbjct: 121 SIDSTGQVVDSHGYLLQPAITLPAQTLGITISQDGVVSATVAGSTTPTNLGTIQLTNFMN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G      +  +           +       T+ +  LE SN N + E+  MI   + +
Sbjct: 181 PAGLQPIGQNLYTETQSSGNPTLNNPGSNGLGTLLQNNLEASNVNVVEELVNMIQAQRGY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
                 +   +  +    + +
Sbjct: 241 EITAKGMQTVDNMLQYLNQTV 261


>gi|23015787|ref|ZP_00055554.1| COG4786: Flagellar basal body rod protein [Magnetospirillum
           magnetotacticum MS-1]
          Length = 246

 Score =  150 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 64/246 (26%), Positives = 115/246 (46%), Gaps = 7/246 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND---IDQKIS 57
           MQ +  I L+ Q AL +++  VA+NM+N +T  F+  ++ F E +   ++    I  K++
Sbjct: 1   MQNTSYIALSRQAALWRQMEVVANNMANANTPAFKGEEMMFREFLVPTRSSERAIGGKLA 60

Query: 58  FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSA 117
           FV           G    T   LDFAL GD +F +E+  G+   R+G F++   G LV++
Sbjct: 61  FVQDVGVLRDTREGPLTKTDNPLDFALHGDGYFQIETEAGMRYARNGHFRLDQTGMLVNS 120

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177
            G    +D    PI     +    V   G +S +   +A M +   +  Q   +  +S  
Sbjct: 121 QGYAV-MDDRDQPIVFAPNETRVEVASDGTVSTENGRVARMKVVKFENDQLLRKAGDSLF 179

Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                P   E +    V +G +E+SN   + EM +M  + +++  +  ++D   +  L+A
Sbjct: 180 ETTQDP---EAVQSPNVAQGMMEESNVQPVLEMTRMTQILREYQGVQKMLDAEHERQLKA 236

Query: 238 IRNIAS 243
           I+ + S
Sbjct: 237 IQTLGS 242


>gi|89075496|ref|ZP_01161907.1| putative flagellar basal-body rod protein FlgF [Photobacterium sp.
           SKA34]
 gi|89048768|gb|EAR54339.1| putative flagellar basal-body rod protein FlgF [Photobacterium sp.
           SKA34]
          Length = 249

 Score =  150 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 58/241 (24%), Positives = 98/241 (40%), Gaps = 11/241 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  + ++        +   A+N++N  T GFR    +   +      +      F  
Sbjct: 1   MDRALYLAMSGAKQDMYGMQVHANNLANVSTTGFRADLQQARSM--QAYGEGLPSRVFSM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119
           + +       GS I+TG +LD A+EGD W A ++       TR G  K+   G L +++G
Sbjct: 59  AERPGNDFAQGSVINTGRDLDVAVEGDGWLAVMDVKGQEAYTRAGHLKIDQTGMLQNSNG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172
           +   L     PI IP       +G+ G +S   +      +  VD        +Q   + 
Sbjct: 119 QLV-LGQNDSPIFIPLPISKIEIGKDGTVSVLPQGAPPDAIAVVDRIKLVKPDNQALFKD 177

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            +          PL+  + VT+ +G LE SN N++ EM  MI L + F     L+   E+
Sbjct: 178 TDGLFKSIGERIPLDADASVTLAKGMLEGSNVNAVSEMTSMIDLQRHFEMQVKLMKTAEE 237

Query: 233 S 233
            
Sbjct: 238 M 238


>gi|76808961|ref|YP_331880.1| flagellar basal body rod protein FlgF [Burkholderia pseudomallei
           1710b]
 gi|126452329|ref|YP_001064565.1| flagellar basal body rod protein FlgF [Burkholderia pseudomallei
           1106a]
 gi|167736704|ref|ZP_02409478.1| flagellar basal body rod protein FlgF [Burkholderia pseudomallei
           14]
 gi|167822319|ref|ZP_02453790.1| flagellar basal body rod protein FlgF [Burkholderia pseudomallei 9]
 gi|167909128|ref|ZP_02496219.1| flagellar basal body rod protein FlgF [Burkholderia pseudomallei
           112]
 gi|226199728|ref|ZP_03795279.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           Pakistan 9]
 gi|242314788|ref|ZP_04813804.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           1106b]
 gi|254196477|ref|ZP_04902901.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           S13]
 gi|254260132|ref|ZP_04951186.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           1710a]
 gi|254295815|ref|ZP_04963272.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           406e]
 gi|14091669|gb|AAK53815.1|AF370881_1 flagellar basal-body rod protein [Burkholderia pseudomallei]
 gi|76578414|gb|ABA47889.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           1710b]
 gi|126225971|gb|ABN89511.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           1106a]
 gi|157805973|gb|EDO83143.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           406e]
 gi|169653220|gb|EDS85913.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           S13]
 gi|225928079|gb|EEH24115.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           Pakistan 9]
 gi|242138027|gb|EES24429.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           1106b]
 gi|254218821|gb|EET08205.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           1710a]
          Length = 253

 Score =  150 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 53/250 (21%), Positives = 89/250 (35%), Gaps = 10/250 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-----QK 55
           M       +       ++ S VA+N++N  T GFR     F  V    ++          
Sbjct: 1   MDRLIYTAMTGATQSLEQQSVVANNLANASTTGFRAQLATFRAVPMNFEDGSGNVDPATT 60

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSL 114
            ++  S         G    TG  LD A++G  W ++  P      TR G   V  +G L
Sbjct: 61  RTYTLSSTPGADFAPGPIERTGNPLDVAVQGPGWLSVMLPDGTEAYTRAGNLHVDQNGQL 120

Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVR 171
           V+A+    V +   + +    +  I   G    +       A   +     V+     ++
Sbjct: 121 VTANNLPVVGNGGPLAVPPNAQLTIGADGTVSALMPGDPPTAVAMIDRLKLVNPDPATMK 180

Query: 172 RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
           R + G+       P +    V V    LE SN N +  M  MI   + F   T LI   +
Sbjct: 181 RGDDGLFRTADGNPADADPAVKVVPNSLEGSNVNPVAAMVSMIDNARAFELQTKLIQSAD 240

Query: 232 KSMLEAIRNI 241
           ++  +A   +
Sbjct: 241 QN-EQAANQL 249


>gi|89056684|ref|YP_512135.1| flagellar basal body rod protein FlgG [Jannaschia sp. CCS1]
 gi|88866233|gb|ABD57110.1| flagellar basal-body rod protein FlgG [Jannaschia sp. CCS1]
          Length = 261

 Score =  150 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 36/259 (13%), Positives = 88/259 (33%), Gaps = 21/259 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             + +I      A + R+  +++N++N  T G+   +  F+++                 
Sbjct: 1   MRALDIAATGMSAQQLRVDVISNNIANMSTTGYSPRRADFADLHYQQMVRAGAINASDGT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q    V      ++ E G+  +TG +LD A+EG  +  +  P      TRDG  
Sbjct: 61  VVPAGVQIGLGVRPAAVTVTWEQGTLGATGGQLDVAIEGRGYLEVTLPSGDNAYTRDGAL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQKGKVIATMGLYSVDM 165
           + T DG +V+  G      +                         + +++  + +     
Sbjct: 121 QRTGDGLIVTNDGFEVNPGITIPDDAQEITINANGEVFASFRGEIQPQLLGQLNMVRFTN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++                      T ++G++E S+ +++ E+  +I   + +
Sbjct: 181 DNGLEAIGSNLFLETGASGAPLAGDPGEDGMGTFRQGYVEQSSVDAVREITDLIEAQRGY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
                ++   ++ +    +
Sbjct: 241 ELNAKVLTAADQILGATTQ 259


>gi|258592561|emb|CBE68870.1| Flagellar basal body and hook proteins [NC10 bacterium 'Dutch
           sediment']
          Length = 245

 Score =  150 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 46/248 (18%), Positives = 92/248 (37%), Gaps = 11/248 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA------IKNDIDQ 54
           M +      +  +A   ++  ++ N++NT T GF+   +              +     +
Sbjct: 1   MVSGLYTAASGLMAQMAKMEALSQNLANTGTPGFKGDLMVIEGGARGPLQSALLIEGRPE 60

Query: 55  KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSL 114
               V  G+       G    T   LD A  G  +F +++P+G+  TR G F +  +G L
Sbjct: 61  GPQPVWIGRRVTDFGRGLIRETQNPLDLANSGPGYFVVQTPQGVRYTRAGNFAIDAEGHL 120

Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174
            +  G             +      F V   G I  +G+ +  + +     S   +R   
Sbjct: 121 ETPDGSRVQ----GKKGAVQIPGGRFIVDNSGRILVEGQEVDRLRIVD-PDSTALIRGGG 175

Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
           S  +             V +++GFLE SN +++  M Q++   +   +    I   ++S+
Sbjct: 176 SLFTLKPSAPEPPVAKTVEIRQGFLEGSNVDAVTAMTQIMVSLRASEAYQKAIHALDQSL 235

Query: 235 LEAIRNIA 242
            +A   + 
Sbjct: 236 NQAASELG 243


>gi|239628977|ref|ZP_04672008.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239519123|gb|EEQ58989.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 255

 Score =  150 bits (377), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 60/256 (23%), Positives = 113/256 (44%), Gaps = 15/256 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN--DIDQKISF 58
           M  S+   ++A  A +Q L   A+NM+N  T G+++++  F++++    +     Q    
Sbjct: 1   MNISYYTAVSAMNAFQQDLDVTANNMANVGTNGYKSMRSDFNDLLYTQMDMRPEAQVGHG 60

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI---ILTRDGRFKVT--DDGS 113
           V +     + + G F  TG  LDFA+ G A+FA+++         TRDG F+++  +DG+
Sbjct: 61  VKNNGPGTTFQQGIFRKTGRALDFAVSGKAFFAIQTSEDEEEPAYTRDGAFQISSTEDGN 120

Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRE 173
            ++ S    VLD    PI++  K      G+         +   +GL+  +  +G +   
Sbjct: 121 YLTTSDGSYVLDWDGEPIELEYKAAEDGRGDDTGELDLDSIADRIGLFVCENPEGLIHAG 180

Query: 174 NSGISPNIPPTP-------LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
           ++                  ED    +V    LE SNA+   EM  ++   + F   + +
Sbjct: 181 SNLFRTGEASGEWMSIEDLDEDQEKSSVMTRTLEMSNADMSTEMVNLMQTQRAFQLNSRI 240

Query: 227 IDENEKSMLEAIRNIA 242
           +   ++ M E I N+ 
Sbjct: 241 VSTADQ-MEEMINNLR 255


>gi|125975103|ref|YP_001039013.1| protein of unknown function DUF1078-like protein [Clostridium
           thermocellum ATCC 27405]
 gi|125715328|gb|ABN53820.1| protein of unknown function DUF1078-like protein [Clostridium
           thermocellum ATCC 27405]
          Length = 259

 Score =  149 bits (376), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 52/262 (19%), Positives = 102/262 (38%), Gaps = 26/262 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51
           M         + LA  +++  V++N++N +T  F+   +    F +++    ND      
Sbjct: 1   MIRGLYTSGWSMLANSKQMDVVSNNLANVNTTAFKKDTLILESFPDMLVRRINDSRSASN 60

Query: 52  ----IDQKISFVASGKEYLSKEVGSFISTGTELDFAL--EGDAWFALESP-----RGIIL 100
               +         G+ +     G    T   LD A+     A+F +  P          
Sbjct: 61  PSGRLGNVQLGNDVGEVFTYYTQGQLQKTDNNLDMAISNCDTAFFTVAVPGGNEEYTEYY 120

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           TRDG F +   G LV+  G   +         I    E F+V + G I Q G+ +A + +
Sbjct: 121 TRDGSFALNAYGQLVTKEGYLVM----GQNGVITLNSENFSVSDDGTIIQDGEAVARLLI 176

Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
            +   +    +  ++ +                V++G+LE SN NS+ EM  MI + + +
Sbjct: 177 RNFTDTTTLRKVGSNLVQRTENTQEQPFD--GVVRQGYLEQSNVNSINEMINMITIMRSY 234

Query: 221 NSITTLIDENEKSMLEAIRNIA 242
            +   ++   + ++ +A+  I 
Sbjct: 235 EANQKILQAQDGTLEKAVNEIG 256


>gi|229825259|ref|ZP_04451328.1| hypothetical protein GCWU000182_00612 [Abiotrophia defectiva ATCC
           49176]
 gi|229790631|gb|EEP26745.1| hypothetical protein GCWU000182_00612 [Abiotrophia defectiva ATCC
           49176]
          Length = 258

 Score =  149 bits (376), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 59/259 (22%), Positives = 107/259 (41%), Gaps = 21/259 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFR---TIKVKFSEVVGAIKND------ 51
           M  S        +  ++R+  + +N++N  T GF+   +    F  V+G    D      
Sbjct: 1   MLRSLYTAYTGMVNEQRRMDIMTNNLANATTAGFKMESSSSQSFDRVLGIKIRDVSEAFN 60

Query: 52  ---IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-----PRGIILTRD 103
              I Q    V  G+ +     G+   T  + D AL G+ +FA+             TRD
Sbjct: 61  DHSIGQMSLGVKVGEVFTDYSQGALRDTAGKYDLALSGEGFFAVRYVDKNGNESTKYTRD 120

Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
           G F++T DG +    G    L   S  +++P   E  +VG  G +S   +VI  + +   
Sbjct: 121 GNFRLTKDGHVTDVYGN--QLRTESGVLRVPLDSEDISVGIDGTVSVNNQVIDKIKIVDF 178

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223
           +      +  ++           E  S   V +G++E SN NS+ EM  +I +T+ + + 
Sbjct: 179 ENYDYIEKFGDNLYQT--VEGATEKESEAQVLQGYIEQSNVNSVREMVNLITITRAYEAG 236

Query: 224 TTLIDENEKSMLEAIRNIA 242
             +I  ++  M  A+ ++ 
Sbjct: 237 QKMIQSSDSIMESAVNSVG 255


>gi|256003243|ref|ZP_05428235.1| protein of unknown function DUF1078 domain protein [Clostridium
           thermocellum DSM 2360]
 gi|281418479|ref|ZP_06249498.1| fagellar hook-basal body protein [Clostridium thermocellum JW20]
 gi|255992934|gb|EEU03024.1| protein of unknown function DUF1078 domain protein [Clostridium
           thermocellum DSM 2360]
 gi|281407563|gb|EFB37822.1| fagellar hook-basal body protein [Clostridium thermocellum JW20]
 gi|316939268|gb|ADU73302.1| flagellar hook-basal body protein [Clostridium thermocellum DSM
           1313]
          Length = 259

 Score =  149 bits (376), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 52/262 (19%), Positives = 102/262 (38%), Gaps = 26/262 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51
           M         + LA  +++  V++N++N +T  F+   +    F +++    ND      
Sbjct: 1   MIRGLYTSGWSMLANSKQMDVVSNNLANVNTTAFKKDTLILESFPDMLVRRINDSRSASN 60

Query: 52  ----IDQKISFVASGKEYLSKEVGSFISTGTELDFAL--EGDAWFALESP-----RGIIL 100
               +         G+ +     G    T   LD A+     A+F +  P          
Sbjct: 61  PSGRLGNVQLGNDVGEVFTYYTQGQLQKTDNNLDMAISNCDTAFFTVAVPGGNGEYTEYY 120

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           TRDG F +   G LV+  G   +         I    E F+V + G I Q G+ +A + +
Sbjct: 121 TRDGSFALNAYGQLVTKEGYLVM----GQNGVITLNSENFSVSDDGTIIQDGEAVARLLI 176

Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
            +   +    +  ++ +                V++G+LE SN NS+ EM  MI + + +
Sbjct: 177 RNFTDTTTLRKVGSNLVQRTENTQEQPFD--GVVRQGYLEQSNVNSINEMINMITIMRSY 234

Query: 221 NSITTLIDENEKSMLEAIRNIA 242
            +   ++   + ++ +A+  I 
Sbjct: 235 EANQKILQAQDGTLEKAVNEIG 256


>gi|53717915|ref|YP_106901.1| flagellar basal body rod protein FlgF [Burkholderia pseudomallei
           K96243]
 gi|53724566|ref|YP_104799.1| flagellar basal body rod protein FlgF [Burkholderia mallei ATCC
           23344]
 gi|67641539|ref|ZP_00440316.1| flagellar basal-body rod protein FlgF [Burkholderia mallei GB8
           horse 4]
 gi|121600078|ref|YP_994292.1| flagellar basal body rod protein FlgF [Burkholderia mallei SAVP1]
 gi|124385734|ref|YP_001028059.1| flagellar basal body rod protein FlgF [Burkholderia mallei NCTC
           10229]
 gi|126438677|ref|YP_001057323.1| flagellar basal body rod protein FlgF [Burkholderia pseudomallei
           668]
 gi|126449756|ref|YP_001082866.1| flagellar basal body rod protein FlgF [Burkholderia mallei NCTC
           10247]
 gi|134283591|ref|ZP_01770290.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           305]
 gi|167001538|ref|ZP_02267333.1| flagellar basal-body rod protein FlgF [Burkholderia mallei PRL-20]
 gi|167717661|ref|ZP_02400897.1| flagellar basal body rod protein FlgF [Burkholderia pseudomallei
           DM98]
 gi|167813803|ref|ZP_02445483.1| flagellar basal body rod protein FlgF [Burkholderia pseudomallei
           91]
 gi|167843909|ref|ZP_02469417.1| flagellar basal body rod protein FlgF [Burkholderia pseudomallei
           B7210]
 gi|167892411|ref|ZP_02479813.1| flagellar basal body rod protein FlgF [Burkholderia pseudomallei
           7894]
 gi|167900909|ref|ZP_02488114.1| flagellar basal body rod protein FlgF [Burkholderia pseudomallei
           NCTC 13177]
 gi|167917165|ref|ZP_02504256.1| flagellar basal body rod protein FlgF [Burkholderia pseudomallei
           BCC215]
 gi|217425035|ref|ZP_03456531.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           576]
 gi|237810462|ref|YP_002894913.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           MSHR346]
 gi|254174652|ref|ZP_04881313.1| flagellar basal-body rod protein FlgF [Burkholderia mallei ATCC
           10399]
 gi|254182139|ref|ZP_04888736.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           1655]
 gi|254188069|ref|ZP_04894581.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           Pasteur 52237]
 gi|254201897|ref|ZP_04908261.1| flagellar basal-body rod protein FlgF [Burkholderia mallei FMH]
 gi|254207231|ref|ZP_04913582.1| flagellar basal-body rod protein FlgF [Burkholderia mallei JHU]
 gi|254359733|ref|ZP_04976004.1| flagellar basal-body rod protein FlgF [Burkholderia mallei
           2002721280]
 gi|52208329|emb|CAH34262.1| flagellar basal-body rod protein [Burkholderia pseudomallei K96243]
 gi|52427989|gb|AAU48582.1| flagellar basal-body rod protein FlgF [Burkholderia mallei ATCC
           23344]
 gi|121228888|gb|ABM51406.1| flagellar basal-body rod protein FlgF [Burkholderia mallei SAVP1]
 gi|124293754|gb|ABN03023.1| flagellar basal-body rod protein FlgF [Burkholderia mallei NCTC
           10229]
 gi|126218170|gb|ABN81676.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           668]
 gi|126242626|gb|ABO05719.1| flagellar basal-body rod protein FlgF [Burkholderia mallei NCTC
           10247]
 gi|134245000|gb|EBA45095.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           305]
 gi|147747791|gb|EDK54867.1| flagellar basal-body rod protein FlgF [Burkholderia mallei FMH]
 gi|147752773|gb|EDK59839.1| flagellar basal-body rod protein FlgF [Burkholderia mallei JHU]
 gi|148028947|gb|EDK86879.1| flagellar basal-body rod protein FlgF [Burkholderia mallei
           2002721280]
 gi|157935749|gb|EDO91419.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           Pasteur 52237]
 gi|160695697|gb|EDP85667.1| flagellar basal-body rod protein FlgF [Burkholderia mallei ATCC
           10399]
 gi|184212677|gb|EDU09720.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           1655]
 gi|217392055|gb|EEC32081.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           576]
 gi|237502787|gb|ACQ95105.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           MSHR346]
 gi|238522490|gb|EEP85934.1| flagellar basal-body rod protein FlgF [Burkholderia mallei GB8
           horse 4]
 gi|243062739|gb|EES44925.1| flagellar basal-body rod protein FlgF [Burkholderia mallei PRL-20]
          Length = 253

 Score =  149 bits (376), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 54/250 (21%), Positives = 85/250 (34%), Gaps = 10/250 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-----QK 55
           M       +       ++ S VA+N++N  T GFR     F  V    ++          
Sbjct: 1   MDRLIYTAMTGATQSLEQQSVVANNLANASTTGFRAQLATFRAVPMNFEDGSGNVDPATT 60

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSL 114
            ++  S         G    TG  LD A++G  W ++  P      TR G   V  +G L
Sbjct: 61  RTYTLSSTPGADFAPGPIERTGNPLDVAVQGPGWLSVMLPDGTEAYTRAGNLHVDQNGQL 120

Query: 115 VSASGKYPVLDMAS---VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171
           V+A+    V +       P           V           V     L  V+     ++
Sbjct: 121 VTANNLPVVGNGGPLAVPPNAQLTIGADGTVSALMPGDPPTAVAMIDQLKLVNPDPATMK 180

Query: 172 RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
           R + G+       P +    V V    LE SN N +  M  MI   + F   T LI   +
Sbjct: 181 RGDDGLFRTADGNPADADPAVKVVPNSLEGSNVNPVAAMVSMIDNARAFELQTKLIQSAD 240

Query: 232 KSMLEAIRNI 241
           ++  +A   +
Sbjct: 241 QN-EQAANQL 249


>gi|212634349|ref|YP_002310874.1| flagellar basal body rod protein FlgF [Shewanella piezotolerans
           WP3]
 gi|212555833|gb|ACJ28287.1| Flagellar basal body rod protein [Shewanella piezotolerans WP3]
          Length = 247

 Score =  149 bits (376), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 93/238 (39%), Gaps = 7/238 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + ++        L+  A+N++N +T GF+    +   +      +      F  
Sbjct: 1   MDKLLYVAMSGAKQNMNSLAISANNLANANTDGFKADLAQARSM--QAFGEGLPTRVFAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119
           +         G   +TG +LD A++GD W A+++  G    TR G       G L +  G
Sbjct: 59  TESPSADFTNGPIKTTGRDLDIAVKGDGWIAVQADDGGEAYTRSGSLSFDTTGVLRNDKG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG---KVIATMGLYSVDMS-QGFVRRENS 175
              + D   + + +P +    +      +   G   +VI  +G   +       + R   
Sbjct: 119 TPLMGDNGPIVLPLPIEKIEISQDGIISVRPTGATAEVIEEVGRIKLVNPGNENLMRGKD 178

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           G+   +   P      V +  G +E SN N+++EM  MI + ++F     ++   E++
Sbjct: 179 GLFRQMSGEPAPADLSVGLLSGAVEGSNVNAVHEMVSMIDIQRQFEMQVKMMKTAEET 236


>gi|161620214|ref|YP_001594100.1| flagellar basal body rod protein FlgF [Brucella canis ATCC 23365]
 gi|161337025|gb|ABX63329.1| flagellar basal body rod protein [Brucella canis ATCC 23365]
          Length = 233

 Score =  149 bits (376), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 77/242 (31%), Positives = 125/242 (51%), Gaps = 14/242 (5%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
             S  +GL++ + LE+R+  +A N++N  TVGFR    KF  +V    +D    +SF  +
Sbjct: 3   NNSIYVGLSSLITLERRMDAIAHNVANASTVGFRGEGTKFDTIVSDKASD---DVSFATA 59

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
           GK Y+  E G  I T   LD A++GDAW +  +P+G + +RDGR K+   G LVS +G  
Sbjct: 60  GKSYIRTEAGPLIKTDNPLDVAVKGDAWMSFSTPQGQVYSRDGRMKMLSTGDLVSVTGNA 119

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
                      I        +   G I Q G  +  +GLY++           SG+ P+ 
Sbjct: 120 -----------ILDVGGAPRISSDGAIYQNGVQVGVIGLYTIPADADLAYAGTSGVIPSK 168

Query: 182 PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           P  P+ D + V V +G +E SN ++M EM ++I +++ F  +  L+ + E ++ EAI+ +
Sbjct: 169 PAQPVVDDNSVGVVQGMIEGSNVDAMTEMTRLISISRAFEQVNNLLSQQEATVSEAIKTL 228

Query: 242 AS 243
            S
Sbjct: 229 GS 230


>gi|254419855|ref|ZP_05033579.1| conserved domain protein [Brevundimonas sp. BAL3]
 gi|196186032|gb|EDX81008.1| conserved domain protein [Brevundimonas sp. BAL3]
          Length = 246

 Score =  149 bits (376), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 66/246 (26%), Positives = 111/246 (45%), Gaps = 7/246 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--IDQKISF 58
           M+ +  IGL+ Q+ L + L  VA+N++N DT GF+  ++     VG    +  I    SF
Sbjct: 1   MENAAYIGLSRQMTLRRELDIVANNVANADTTGFKVEQLMVGTEVGQRARNDSIRPSASF 60

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP--RGIILTRDGRFKVTDDGSLVS 116
           V           GS   TG  LDFA+ G+  F        G   TRDG F +  +G L +
Sbjct: 61  VLDNGVGRDFGQGSMSETGRPLDFAIAGEGAFFTVRDGAAGEAYTRDGAFTMDPEGRLTT 120

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
             G+  +       I +       +VG  G I+Q G++   + +   D + G + +   G
Sbjct: 121 KQGQAVLGG--GAEIVLDPALGAPSVGADGTITQSGQITGRLSVVRFD-TLGVLEKGGDG 177

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           +  N       + + V + +G LE SN NS+ E+  +I +++ + SIT +I+        
Sbjct: 178 LYRNGSNVQPVEANDVQIHQGSLEASNVNSLTEITNLIEISRAYESITRMIENTNDLSRR 237

Query: 237 AIRNIA 242
           A+  + 
Sbjct: 238 AVERLG 243


>gi|300817268|ref|ZP_07097486.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 107-1]
 gi|300530244|gb|EFK51306.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 107-1]
          Length = 261

 Score =  149 bits (376), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 39/261 (14%), Positives = 84/261 (32%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +         A +  +S +A+N++N +T GF+  +V F ++    +           
Sbjct: 1   MNAALWFSKTGLSAQDAEMSAIANNIANVNTTGFKRDRVMFQDLFYQTQEAPGAMLDQNN 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106
                 Q  S V       +   G+  +T   ++ A+ G  +  ++     I  TRDG  
Sbjct: 61  IMPTGLQFGSGVRIVGTQKTFTEGNVETTDNAMNVAIMGQGFLQVQKANGDIAYTRDGNL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165
           +V  DG L  + G     ++                             +  + L +   
Sbjct: 121 QVNADGVLTISQGLPLQPEIDVPAGATNVAFGEDGTVTAILPGDSDVTELGQLTLVNFAN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++            +         T++   LE SN + + EM  MI + + +
Sbjct: 181 PAGLSAEGDNLYLETAASGQPTEGVPGEDGLGTLQDNALEGSNVDIVNEMVAMITVQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
                ++   +  +    + +
Sbjct: 241 EMNAKMVSAADDMLQYISQTL 261


>gi|325567523|ref|ZP_08144190.1| flagellar hook-basal body protein [Enterococcus casseliflavus ATCC
           12755]
 gi|325158956|gb|EGC71102.1| flagellar hook-basal body protein [Enterococcus casseliflavus ATCC
           12755]
          Length = 298

 Score =  149 bits (376), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 50/295 (16%), Positives = 106/295 (35%), Gaps = 56/295 (18%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50
           M  S   G++    L+ ++  V++N++N +TVGF++ +V F +++    +          
Sbjct: 1   MLRSLYSGVSGMKNLQTKMDVVSNNIANVNTVGFKSSRVLFQDMMSQTMSNATAPGNGLG 60

Query: 51  --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---RGIILTRDGR 105
             +  Q    V +G       VG+  STG  +DF + G  +F ++ P        TRDG 
Sbjct: 61  GINATQIGLGVQTGSIDTINTVGAPQSTGRSMDFYISGQGYFMVQGPGANGETYYTRDGA 120

Query: 106 FKVTDDGSLVSASGKYP------------------------------------VLDMASV 129
           F    +G+L ++ G                                        L +   
Sbjct: 121 FVRDSNGTLTNSDGMQVLGRSVNGGQPVVYDDNFDENTALSGQGAVSPLSIPSTLTVNGE 180

Query: 130 PIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP-----T 184
            +         N     +   +  V+  +G+ + +  +G  +   +              
Sbjct: 181 TLTYNSMAIDANGLVLAKYGNQTFVMGKVGVATFNNPEGLEKVGGNNYIQTSNSGNAIVA 240

Query: 185 PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              +    T++ G LE SN +   E  +MI  ++ + + +  I  +++ + E + 
Sbjct: 241 GPGNNGAGTLQAGALEMSNVDLSTEFTEMIIASRAYQANSRSITTSDEMLQELLN 295


>gi|168180937|ref|ZP_02615601.1| flagellar basal body rod protein [Clostridium botulinum NCTC 2916]
 gi|182668349|gb|EDT80328.1| flagellar basal body rod protein [Clostridium botulinum NCTC 2916]
          Length = 255

 Score =  149 bits (376), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 53/258 (20%), Positives = 97/258 (37%), Gaps = 20/258 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKF---SEVVGAI--------- 48
           M  S    ++  ++LE +  T++ N+SN  TVG+++  + F    +V+            
Sbjct: 1   MIRSLYTAVSGMISLEAKQDTISANLSNASTVGYKSTNLAFKKFEDVLMENYDKKLGNKN 60

Query: 49  -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107
            +N I          +       G    TG   DFALEG  +F +E+      TRDG F 
Sbjct: 61  IQNIIGGLSMGNKIDEVNNLFTQGIIQDTGKPTDFALEGRGFFTIENNGRNYYTRDGHFH 120

Query: 108 VTDDGSLVSASGKYPVL--DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           V   G LV+ SG   +           I   ++       G I   G    +  +   + 
Sbjct: 121 VDTRGYLVNDSGYNVMGINRNTGAREAIFVGNKTIGTDASGNIILNGVPSYSFQVADFND 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225
                +  ++    N P           V++  LE SN N   EM  M+   + F +   
Sbjct: 181 YNSLKKIGDNLFEGNNPQNIN-----GIVRQNSLEKSNVNVTNEMVTMLTTMRSFETNQK 235

Query: 226 LIDENEKSMLEAIRNIAS 243
           ++   ++++ + +  + +
Sbjct: 236 IVQSIDETLGKTVNEVGA 253


>gi|23092317|gb|AAN08642.1| FlgG [Aeromonas hydrophila]
          Length = 262

 Score =  149 bits (376), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 94/261 (36%), Gaps = 21/261 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +  I      A +  ++  ++N++N  TVGF+  +  + +++    N    +     
Sbjct: 1   MNPALWISKTGLDAQQTNIAVTSNNLANASTVGFKKSRAIYEDLLYQNINQPGGRSSADT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                    +         +   G+  +T   LD  + G  +F ++ P G    TR+G+F
Sbjct: 61  ELPSGLMLGAGAKVVATQKNHSQGNVQTTDNSLDLMISGRGYFEIQLPDGSAAYTRNGQF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG--KVIATMGLYSVD 164
            + D+G++V+    YP+     +P          +     ++   G  +V+  +      
Sbjct: 121 TLNDEGTIVTPGNGYPLQPEIQIPENAQSVTVGEDGQVSVQLKGDGASQVVGQINTSDFV 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQK 219
            + G      +              +        +K+G LE SN N   E+  +I   + 
Sbjct: 181 NASGLQPMGENMFVETQSSGAPIQGTAGADGLGVIKQGMLETSNVNVTEELVNLIQAHRV 240

Query: 220 FNSITTLIDENEKSMLEAIRN 240
           +   + ++   +  M   I+ 
Sbjct: 241 YEMNSNVLSAVDGMMSFLIQR 261


>gi|254466371|ref|ZP_05079782.1| flagellar basal-body rod protein FlgF [Rhodobacterales bacterium
           Y4I]
 gi|206687279|gb|EDZ47761.1| flagellar basal-body rod protein FlgF [Rhodobacterales bacterium
           Y4I]
          Length = 238

 Score =  149 bits (375), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 67/241 (27%), Positives = 115/241 (47%), Gaps = 6/241 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M T+    ++ Q  L + +  +A+N++N+ T G+R   + FSE V +        +S   
Sbjct: 1   MGTAGYATISRQSGLMREMRVIANNIANSATTGYRQEGLIFSEFVQSSPGQ--PSVSMSR 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           +     S E G   +TG   DFA+EGD +F +E+P+G  LTR G F     G LV+  G 
Sbjct: 59  ANIFNTSMEQGQLTNTGGTFDFAIEGDGFFMIETPQGERLTRSGAFSPNAAGDLVTMDGY 118

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
              LD    P+ +P       VG  G +S  G+++  +GL+        VR +       
Sbjct: 119 RV-LDAGRAPVFVPPDAGKIEVGADGSLSANGRLLGQLGLFKPVEKHTLVREDGVMFRVE 177

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
                +E+     V +GFLE SN N++ E+ +MI + + +    + +   ++ +  AI+N
Sbjct: 178 GD---IEENFDSKVLQGFLEGSNVNAISEVSRMIDVQRAYEMGQSFLQTEDERIRNAIKN 234

Query: 241 I 241
           +
Sbjct: 235 L 235


>gi|209545588|ref|YP_002277817.1| flagellar basal body rod protein [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|209533265|gb|ACI53202.1| flagellar basal body rod protein [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 247

 Score =  149 bits (375), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 67/245 (27%), Positives = 118/245 (48%), Gaps = 8/245 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----DIDQKI 56
           M+ +  I L+    L + L   A+N++N +T GF+  K  FS+ +   K+      D++ 
Sbjct: 1   MENTTYIALSRVDVLSRALEVTANNLANANTDGFKASKELFSDYLVQQKDVHGLPGDKEE 60

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVS 116
            +      Y  +  G+   TG   DFA+ G+ +FA+ + +G+ LTR+G F    DG++V 
Sbjct: 61  VYTQDRSTYQDRLQGALRQTGNLTDFAINGEGYFAVRTTQGVRLTRNGEFNRRADGTIVD 120

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
            SG  P++D     + IP +D   +V   G +S +   +AT+ L +VD     V      
Sbjct: 121 GSGN-PLIDRNGNNVVIPPRDHTLSVASDGTMSTETGRVATLDLVTVDNPNTLVPEGGYL 179

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           + P     P  +++   +++G LE SN N++ E  QM+ + + ++    LI         
Sbjct: 180 LRPTT---PTRNVANKEIRQGMLESSNVNAVSETTQMVEIQRDYDLTFQLIQTESTRQSN 236

Query: 237 AIRNI 241
           AI  I
Sbjct: 237 AIDKI 241


>gi|120598233|ref|YP_962807.1| flagellar basal body rod protein FlgF [Shewanella sp. W3-18-1]
 gi|120558326|gb|ABM24253.1| flagellar basal-body rod protein FlgF [Shewanella sp. W3-18-1]
          Length = 247

 Score =  149 bits (375), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 45/238 (18%), Positives = 86/238 (36%), Gaps = 7/238 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     I ++        L+   +N++N +T GF++   +   +      +      F  
Sbjct: 1   MDKFLYISMSGAKQNMNELALRGNNLANANTDGFKSDMAQARSM--QAFGEGLPTRVFAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASG 119
                 +   G   +TG +LD A++GD WFA++        TR G       G L +  G
Sbjct: 59  IETPSANFRSGPIKTTGRDLDVAIKGDGWFAVQAKDGAEAYTRSGSLSFDATGLLHNDRG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
              + D   + + +P      +      +  +G     +        V+     + R   
Sbjct: 119 NPVMGDAGPIVLPLPIDKVTISQDGIISVRPQGATAEVIEEVGRLKLVNPGNAQMMRGED 178

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           G+   +          V V+ G +E SN N + EM  +I L ++F     ++   E+ 
Sbjct: 179 GLFRLVSGNDAPADPNVAVESGAVEGSNVNPVDEMVSLIELQRQFEMQVKMMKTAEEI 236


>gi|2916790|emb|CAA11956.1| flagellar basal-body rod protein [Sinorhizobium meliloti]
          Length = 229

 Score =  149 bits (375), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 104/230 (45%), Positives = 155/230 (67%), Gaps = 4/230 (1%)

Query: 13  LALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGS 72
           +ALE+RL+T+ADN++N++TVGFR  +VKF++V+G  K     K+S+V+ G+E+LS + G+
Sbjct: 1   MALEKRLNTLADNIANSNTVGFRATEVKFNQVLGDTK---PTKVSYVSEGEEFLSTKTGA 57

Query: 73  FISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQ 132
              TG+ LDFA++GDAWF++++P G  LTRDGRF +T+ G LV+  G  PVLD    PIQ
Sbjct: 58  LARTGSALDFAIKGDAWFSIDTPGGPALTRDGRFTLTETGELVTIKGY-PVLDAGGAPIQ 116

Query: 133 IPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV 192
           +        VG  G I Q G  IA +GLY  D S+GF+R +NS   P   P P+ D   V
Sbjct: 117 LNGGAGEIAVGADGAIHQNGVQIALLGLYEADFSKGFMRYDNSSDMPAAQPEPVVDRFDV 176

Query: 193 TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            V +GFLE+SN N++ EM Q+I +T+ F+++T L+ ++E S+ +AI  + 
Sbjct: 177 GVMQGFLEESNVNAIQEMSQLIMITRAFDNVTALMRDSEGSLDKAIETLG 226


>gi|163750569|ref|ZP_02157807.1| flagellar basal-body rod protein FlgF [Shewanella benthica KT99]
 gi|161329724|gb|EDQ00713.1| flagellar basal-body rod protein FlgF [Shewanella benthica KT99]
          Length = 246

 Score =  149 bits (375), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 92/238 (38%), Gaps = 7/238 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + ++        L+  A+N++N +T GF+    +   +      +      F  
Sbjct: 1   MDKLLYVAMSGAKQNMNSLAVRANNLANANTDGFKADMAQARSM--QAFGEGLPTRVFAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119
           +         G   +TG +LD A++GD W A++S  G    TR G       G L +  G
Sbjct: 59  TESPSADFTAGPIKTTGRDLDIAVKGDGWIAVQSADGGEAYTRSGSLSFDTTGLLRNDRG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG---KVIATMGLYSVDMS-QGFVRRENS 175
              + D   + + +P +           +   G   +VI  +G   +       + R   
Sbjct: 119 NPIMGDAGPIVLPLPIEKIEIAQDGTISVRPLGATAEVIEVVGRIKLVNPGNQNLMRGED 178

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           G+   I        + +T++ G +E SN N++ EM  +I + ++F     ++   E+ 
Sbjct: 179 GLFRLISGDNAPADAFITLESGAVEGSNVNAVSEMVALISIQRQFEMQVKMMKTAEEM 236


>gi|27381995|ref|NP_773524.1| flagellar basal body rod protein FlgF [Bradyrhizobium japonicum
           USDA 110]
 gi|27355165|dbj|BAC52149.1| flagellar basal body rod protein [Bradyrhizobium japonicum USDA
           110]
          Length = 242

 Score =  149 bits (375), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 80/242 (33%), Positives = 136/242 (56%), Gaps = 4/242 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           MQ++  +GL+AQ+ALE+RL T+A+N++N +T  FRT  VKF  V+     +    ++F +
Sbjct: 1   MQSALYVGLSAQVALEKRLQTIANNVANVNTAAFRTDVVKFETVLSKAGAN---PVAFSS 57

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
            G   +S+E G+   +G  LD A+ G  W A   P G + TRDGR ++  +G L + +G 
Sbjct: 58  PGDNIISRETGNITESGNPLDVAVVGQGWLAFAGPNGTVYTRDGRLQIAANGDLQTVAG- 116

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
           +PV+D     I +       ++   G I+Q    I T+GL+++       R  NSG++P+
Sbjct: 117 FPVIDAGGAQITLDPNGGPVSIARSGAITQDNNEIGTIGLFNIPTDANLERYGNSGVTPD 176

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
            P T + D S    K+G++E S AN M E+ +++  ++ F+   ++I+  E S+  AIR 
Sbjct: 177 RPATAIADFSRDGFKQGYVEGSGANPMMELTKLMAASRAFDGTNSMIEGTESSLQNAIRT 236

Query: 241 IA 242
           + 
Sbjct: 237 LG 238


>gi|330445349|ref|ZP_08309001.1| flagellar basal-body rod protein FlgF [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
 gi|328489540|dbj|GAA03498.1| flagellar basal-body rod protein FlgF [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
          Length = 249

 Score =  149 bits (375), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 56/241 (23%), Positives = 99/241 (41%), Gaps = 11/241 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  + ++        +   A+N++N +T GFR    +   +      +      F  
Sbjct: 1   MDRALYLAMSGAKQDMYGMQVHANNLANVNTTGFRADLQQARSM--QAYGEGMPSRVFSM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           + +       GS I+TG +LD A++GD W A+   +     TR G  K+   G L +++G
Sbjct: 59  AERPGNDFAQGSVINTGRDLDVAIQGDGWLAVMDAKGQEAYTRAGHLKIDQTGMLQNSNG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172
              +L     PI IP       +G+ G +S   +      +  VD        +Q   + 
Sbjct: 119 -QLLLGQNDSPIFIPLPISKIEIGKDGTVSVLPQGAPPDAMAVVDRIKLVSVDNQALFKD 177

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            +          P++  + VT+ +G LE SN N++ EM  MI L + F     L+   E+
Sbjct: 178 TDGLFKLTGDRIPMDADANVTLAKGMLEGSNVNAVSEMTSMIDLQRHFEMQVKLMKTAEE 237

Query: 233 S 233
            
Sbjct: 238 M 238


>gi|90579910|ref|ZP_01235718.1| putative flagellar basal-body rod protein FlgF [Vibrio angustum
           S14]
 gi|90438795|gb|EAS63978.1| putative flagellar basal-body rod protein FlgF [Vibrio angustum
           S14]
          Length = 249

 Score =  149 bits (375), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 58/241 (24%), Positives = 98/241 (40%), Gaps = 11/241 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  + ++        +   A+N++N  T GFR    +   +      +      F  
Sbjct: 1   MDRALYLAMSGAKQDMYGMQVHANNLANVSTTGFRADLQQARSM--QAYGEGLPSRVFSM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119
           + +       GS I+TG +LD A+EGD W A ++       TR G  K+   G L +++G
Sbjct: 59  AERPGNDFAQGSVINTGRDLDVAVEGDGWLAVMDVKGQEAYTRAGHLKIDQTGMLQNSNG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172
           +   L     PI IP       +G+ G +S   +      +  VD        +Q   + 
Sbjct: 119 QLV-LGQNDSPIFIPLPISKIEIGKDGTVSVLPQGAPPDAMAVVDRIKLVKPDNQALFKD 177

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            +          PL+  + VT+ +G LE SN N++ EM  MI L + F     L+   E+
Sbjct: 178 TDGLFKSIGERIPLDADASVTLAKGMLEGSNVNAVSEMTSMIDLQRHFEMQVKLMKTAEE 237

Query: 233 S 233
            
Sbjct: 238 M 238


>gi|332296626|ref|YP_004438549.1| flagellar hook-basal body protein [Thermodesulfobium narugense DSM
           14796]
 gi|332179729|gb|AEE15418.1| flagellar hook-basal body protein [Thermodesulfobium narugense DSM
           14796]
          Length = 255

 Score =  149 bits (375), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 50/251 (19%), Positives = 96/251 (38%), Gaps = 13/251 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA------IKNDIDQ 54
           M  S    ++  L+ +  L  VA+N+SN +T GF+     F++V+         + +  Q
Sbjct: 1   MDNSIFTAVSGALSSQSALDVVANNISNVNTTGFKESNPTFADVLSQELSFATSRTNPLQ 60

Query: 55  KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSL 114
             +        LS   G  ++T    DFA+ G  +F +        TRDG F +  +G+L
Sbjct: 61  IGAGSKLDSTSLSFTQGPVLTTNDPTDFAISGSGFFVVSDGTNTYYTRDGSFSLDSNGNL 120

Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM------GLYSVDMSQG 168
           V+A G Y      ++ I    K+ +    +                     +        
Sbjct: 121 VTADGLYVQGTNGNINIDTTSKNFVNFTVKPDGSVYSNFSNGQSVLDGKIMVVDFINKNA 180

Query: 169 FVRRENSGISPNIP-PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
            +    +  SP++    P+   +G ++ +  LE SN +   +M  +I   + +      I
Sbjct: 181 LINVGGNNFSPSVNSGNPVALSNGYSIIQNALEGSNTDLATQMANLIDYERTYQVNAQAI 240

Query: 228 DENEKSMLEAI 238
             ++  +  AI
Sbjct: 241 TTSDSMLQTAI 251


>gi|294508678|ref|YP_003572737.1| flagellar basal-body rod protein [Salinibacter ruber M8]
 gi|294345007|emb|CBH25785.1| flagellar basal-body rod protein [Salinibacter ruber M8]
          Length = 260

 Score =  149 bits (375), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 45/244 (18%), Positives = 96/244 (39%), Gaps = 7/244 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M   F    AA   +  +   VA+N++N  T G++  +V    +   +  D         
Sbjct: 20  MLPRFQNAAAAMSEMRLQQEQVANNLANASTTGYKKDRVFTEALNERLTKDGSPISD--R 77

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRFKVTDDGSLVSAS 118
             ++      GS   TG  LD AL  + +F  +         TR G F V   G+L +  
Sbjct: 78  RLEQANDLSGGSLKETGNPLDVALGDEGFFVTQPRGGGAERYTRAGHFVVGSQGTLRTPE 137

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178
           G+  + +   + + + Q  +I  + + G I+   + +  + + + +  +   R   +  +
Sbjct: 138 GREVMGEGGPIQLPVEQGGDIS-ISKSGRITAGQQRVGALRVATFENPEQLERTSGASFA 196

Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
                   +      V +G +E SN + + E+  MI + ++F +    I   +  +  A 
Sbjct: 197 --AGDAQPQAAENPVVLQGKVETSNVDPVTELTNMIEIQRQFEAQQKTIQTTDGVLGRAT 254

Query: 239 RNIA 242
           +++ 
Sbjct: 255 QSLG 258


>gi|254462007|ref|ZP_05075423.1| flagellar basal-body rod protein FlgF [Rhodobacterales bacterium
           HTCC2083]
 gi|206678596|gb|EDZ43083.1| flagellar basal-body rod protein FlgF [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 237

 Score =  149 bits (375), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 63/241 (26%), Positives = 112/241 (46%), Gaps = 6/241 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M+ +    L  Q  L + +S +A N++N +T G+R   + FSEV+    +     +S   
Sbjct: 1   MENASYTTLTRQSGLMREMSVIASNIANANTTGYRQEGLIFSEVIKGESD--APSLSMAT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           +     S   G+   TG   D A++GD +F +++P G  L+R G F   + G LV+  G 
Sbjct: 59  ARARATSLAPGTITQTGGPYDVAIDGDGFFQIQTPGGTRLSRAGHFMPNNQGDLVTPDGY 118

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
              LD    P+ IPQ     ++   G +S KG+++  +G+         +R +      +
Sbjct: 119 RV-LDAGGAPLGIPQGTGKISISADGTLSSKGQLLGQLGIVQPSTGTQILREDGVHFRAD 177

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
               P E      V++GFLE SN N M ++ +MI + + +    +  +   + +  A+R 
Sbjct: 178 G---PTEPNFDARVRQGFLEGSNVNPMSQIARMIEVQRAYEMGQSFAETENERLRNAVRT 234

Query: 241 I 241
           I
Sbjct: 235 I 235


>gi|217972599|ref|YP_002357350.1| flagellar basal body rod protein FlgF [Shewanella baltica OS223]
 gi|217497734|gb|ACK45927.1| flagellar basal-body rod protein FlgF [Shewanella baltica OS223]
          Length = 247

 Score =  148 bits (374), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 45/238 (18%), Positives = 90/238 (37%), Gaps = 7/238 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + ++        L+  A+N++N +T GF++   +   +      +      F  
Sbjct: 1   MDKFLYVAMSGAKQNMNELALRANNLANANTDGFKSDMAQARSM--QAFGEGLPSRVFAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASG 119
           +     +   G   +TG +LD A++GD WFA++        TR G       G L +  G
Sbjct: 59  TESPSANFRSGPIKTTGRDLDVAIKGDGWFAVQAKDGSEAYTRAGSLSFDSTGLLHNDRG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
              + D   + + +P +    +      +  +G     +        V+     + R   
Sbjct: 119 NPVMGDAGPIVLPLPIEKVSISQDGIISVRPQGATAEVVEEVGRLKLVNPGNAEMMRGED 178

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           G+   +          V V+ G +E SN N + EM  +I L ++F     ++   E++
Sbjct: 179 GLFRLVSGNIAPADPSVGVESGAVEGSNVNPVDEMVSLIDLQRQFELQVKMMKTAEEN 236


>gi|153001471|ref|YP_001367152.1| flagellar basal body rod protein FlgF [Shewanella baltica OS185]
 gi|160876202|ref|YP_001555518.1| flagellar basal body rod protein FlgF [Shewanella baltica OS195]
 gi|151366089|gb|ABS09089.1| flagellar basal-body rod protein FlgF [Shewanella baltica OS185]
 gi|160861724|gb|ABX50258.1| flagellar basal-body rod protein FlgF [Shewanella baltica OS195]
 gi|315268392|gb|ADT95245.1| flagellar basal-body rod protein FlgF [Shewanella baltica OS678]
          Length = 247

 Score =  148 bits (374), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 45/238 (18%), Positives = 90/238 (37%), Gaps = 7/238 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + ++        L+  A+N++N +T GF++   +   +      +      F  
Sbjct: 1   MDKFLYVAMSGAKQNMNELALRANNLANANTDGFKSDMAQARSM--QAFGEGLPTRVFAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASG 119
           +     +   G   +TG +LD A++GD WFA++        TR G       G L +  G
Sbjct: 59  TESPSANFRSGPIKTTGRDLDVAIKGDGWFAVQAKDGSEAYTRAGSLSFDSTGLLHNDRG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
              + D   + + +P +    +      +  +G     +        V+     + R   
Sbjct: 119 NPVMGDAGPIVLPLPIEKVSISQDGIISVRPQGATAEVVEEVGRLKLVNPGNAEMMRGED 178

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           G+   +          V V+ G +E SN N + EM  +I L ++F     ++   E++
Sbjct: 179 GLFRLVSGNIAPADPSVGVESGAVEGSNVNPVDEMVSLIDLQRQFELQVKMMKTAEEN 236


>gi|71281915|ref|YP_268223.1| flagellar basal-body rod protein FlgF [Colwellia psychrerythraea
           34H]
 gi|71147655|gb|AAZ28128.1| flagellar basal-body rod protein FlgF [Colwellia psychrerythraea
           34H]
          Length = 247

 Score =  148 bits (374), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 54/248 (21%), Positives = 100/248 (40%), Gaps = 7/248 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     I ++      Q LS  A+N++N  T GF+    +   +      +      F  
Sbjct: 1   MDKLLYIAMSGAKQNMQALSINANNLANAKTTGFKADLAQARSM--QAFGEGLPSRVFSM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           + +   + + GS + TG  LD A+EG+ +FA+++       TR G F++T+ G+L +  G
Sbjct: 59  TERASQNFDSGSILHTGRSLDMAIEGEGFFAVQAEDGQEAYTRGGHFRLTETGALETNDG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
           +  + +   + + +P  +   +      +   G   +          V+     V + N 
Sbjct: 119 ELVIGENGPITLPLPINNIQISRDGTIMVQPAGAPSSVQEEVGRIKLVNPDTRLVDKGND 178

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
           G+        L     V V  G LE SN N + EM  MI L ++F     ++   E+   
Sbjct: 179 GLFRAKNGGQLIADVNVNVLGGALESSNVNPINEMTDMIALQRQFEMQLKMMKTAEEIDS 238

Query: 236 EAIRNIAS 243
            A   + +
Sbjct: 239 SASSLLRA 246


>gi|225871945|ref|YP_002753399.1| flagellar basal-body rod protein FlgG [Acidobacterium capsulatum
           ATCC 51196]
 gi|225791437|gb|ACO31527.1| flagellar basal-body rod protein FlgG [Acidobacterium capsulatum
           ATCC 51196]
          Length = 262

 Score =  148 bits (374), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 48/259 (18%), Positives = 94/259 (36%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +     +   A +  L T+A+N++N+ TVGFR  +++F +++               
Sbjct: 1   MIRALYTAASGMSAQQMNLDTIANNLANSSTVGFRERQLQFQDMIYQNLVTPGAAQSQQA 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFK 107
                Q      S    L    G    T   LD A++G  +F ++ P G    TR G F 
Sbjct: 61  VSAGLQIGLGTKSAATELIMTQGDLNQTNNPLDLAIQGQGFFQVQRPDGTLAYTRAGNFY 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDMS 166
           + + G +V   G   + ++             + V        Q  + +  + L +    
Sbjct: 121 LNNQGQVVDPQGDLLIPNITVPQNATAVTITQYGVVNATLPGQQNPQQLGQIQLATFVNP 180

Query: 167 QGFVRRENSGISPNIP------PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
            G     ++     +         P       T+++G+LE+SN + +    QM+   + +
Sbjct: 181 GGLESTGSNDYLATLSSGNAVLGNPGGQQGLGTLQQGYLENSNVDVVGAFVQMVLAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
            S + +I   +    E   
Sbjct: 241 ESNSKVIKAADGMYSEVNN 259


>gi|28211310|ref|NP_782254.1| flagellar basal body rod protein FlgG [Clostridium tetani E88]
 gi|28203750|gb|AAO36191.1| flagellar hook-basal body complex protein [Clostridium tetani E88]
          Length = 260

 Score =  148 bits (374), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 50/261 (19%), Positives = 102/261 (39%), Gaps = 23/261 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVV----------GA 47
           M       ++  +  E + + V +N++N  T GF++  +    F +V+            
Sbjct: 1   MIRGLYTAVSGMITEEAKQNVVTNNLANVTTPGFKSDNLSVKQFDDVLLYNYDKKVGNKN 60

Query: 48  IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP----RGIILTRD 103
           +++D+          +     + G    T    DFA++G  +F +E         + TR+
Sbjct: 61  VRHDLGGLSMGSKIDEVNTYFQQGMLEKTDRATDFAIQGKGFFVVEREGQGGNERLYTRN 120

Query: 104 GRFKVTDDGSLVSASGKYPVL--DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLY 161
           G F V + G LV+ SG   +   +       I    E F + ++G I   G    T+ + 
Sbjct: 121 GHFYVNNRGFLVNDSGYNVIGRNNDTGAVEPIRLNTENFTLTKEGNILVDGNTTYTLQVA 180

Query: 162 SVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221
                    +  +             + +   VK+  LE SN N++ EM +M+ + + F 
Sbjct: 181 DFQNYNDLRKVGHDAY----TGNNAVNSTDYIVKQNTLEKSNVNTIREMIEMMTVMRTFE 236

Query: 222 SITTLIDENEKSMLEAIRNIA 242
           +   +I   + ++ +A+  I 
Sbjct: 237 TNQKIIQSIDDTLGKAVNEIG 257


>gi|114777905|ref|ZP_01452819.1| flagellar basal-body rod protein FlgG [Mariprofundus ferrooxydans
           PV-1]
 gi|114551692|gb|EAU54244.1| flagellar basal-body rod protein FlgG [Mariprofundus ferrooxydans
           PV-1]
          Length = 251

 Score =  148 bits (374), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 37/248 (14%), Positives = 84/248 (33%), Gaps = 20/248 (8%)

Query: 12  QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID--------------QKIS 57
             A    +  +++N++N +T GF+  +  F +++                      Q   
Sbjct: 1   MAAQSLNVDVISNNIANVNTNGFKRGRANFQDLMYQQIKAPGAEASAAGTQLPTGIQVGL 60

Query: 58  FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVS 116
            V +         GSF  T   LD  ++G  +F ++ +      TR G F +   G +V+
Sbjct: 61  GVRTASVDSIFSEGSFQQTNNPLDLTIQGRGFFQVQLANGETAYTRAGSFSLDATGQIVT 120

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
            +G      +         +          + +    V+  + +       G  +   + 
Sbjct: 121 QNGDVLQPGITIPADAQSIQIAQDGTVSVTQANATQTVLGQIQIADFLNPAGLAKLGGNL 180

Query: 177 ISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
             P+         +       ++ +G LE SN + + EM  +I   + +   +  I  ++
Sbjct: 181 FQPSNASGTAVIGNPTENGLGSMTQGTLEMSNVSMVEEMVNLIAGQRAYEMNSKAIQASD 240

Query: 232 KSMLEAIR 239
           + +  A  
Sbjct: 241 EMLQTANN 248


>gi|284041497|ref|YP_003391837.1| fagellar hook-basal body protein [Conexibacter woesei DSM 14684]
 gi|283945718|gb|ADB48462.1| fagellar hook-basal body protein [Conexibacter woesei DSM 14684]
          Length = 232

 Score =  148 bits (374), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 38/248 (15%), Positives = 90/248 (36%), Gaps = 29/248 (11%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIK---VKFSEVVGAIKNDI---DQ 54
           M+    I  +  +A + R   +A++++N  T G++  +     F +++ +  N       
Sbjct: 1   MERGLYIAASGMIAEQMRQDAIANDLANASTPGYKADRITQASFGDLLLSNSNTGQVIGP 60

Query: 55  KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSL 114
             +   +  +       +   T   LD A+ G+ WF +++P G+  TR+G+F  +  G L
Sbjct: 61  LGTGAYADSKVTDLRPQATRVTEEPLDLAIVGEGWFGVQTPEGVRYTRNGQFSASPQGQL 120

Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174
           +   G+  +           +                     ++G++++  +    R+E 
Sbjct: 121 IDQLGRPVLGPGGQPVQLDARGHVRP---------------GSVGVFALANA----RKEG 161

Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
                          +   V+ G LE S  +    M  MI   + + +   +I   + ++
Sbjct: 162 DNYFTGAAGGQ----ATGQVEIGALEGSGIDPTRTMVDMIASFRAYEAGQKVITTIDDTL 217

Query: 235 LEAIRNIA 242
                 + 
Sbjct: 218 RRTSTQVG 225


>gi|170725956|ref|YP_001759982.1| flagellar basal body rod protein FlgF [Shewanella woodyi ATCC
           51908]
 gi|169811303|gb|ACA85887.1| flagellar basal-body rod protein FlgF [Shewanella woodyi ATCC
           51908]
          Length = 247

 Score =  148 bits (374), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 44/240 (18%), Positives = 87/240 (36%), Gaps = 7/240 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + ++        L+  A+N++N +T GF+    +   +      +      F  
Sbjct: 1   MDKLLYVAMSGAKQNMNALAVRANNLANANTDGFKADMEQARSM--QAFGEGLPTRVFAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASG 119
           +     +   G   +TG +LD A+ G  W A++ +  G   TR G       G L +  G
Sbjct: 59  TENPSANFSSGPIKTTGRDLDIAINGSGWIAVQGADGGEAYTRSGSLSFDTSGLLRNDRG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
              + D   + + +P +           +   G     +        V+   G + R   
Sbjct: 119 NPIMGDSGPIVLPLPIEKVEIAQDGIISVRPLGATAEVIEEVGRIKLVNPGDGNMMRGAD 178

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
           G+   +          V V+ G +E SN N++ EM  +I + ++F     ++   E+   
Sbjct: 179 GLFRQMSGEIAPADPRVAVESGAVEGSNVNAVDEMVSLIDIQRQFEMQVKMMKTAEEMDQ 238


>gi|94263288|ref|ZP_01287104.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|94267693|ref|ZP_01290962.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|94272297|ref|ZP_01292100.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|93450173|gb|EAT01484.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|93451895|gb|EAT02626.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|93456371|gb|EAT06495.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
          Length = 243

 Score =  148 bits (374), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 53/231 (22%), Positives = 103/231 (44%), Gaps = 6/231 (2%)

Query: 12  QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
            L  E+RL  VA+N++N DT G++     F E++  +  D  +      +       + G
Sbjct: 16  MLGQERRLDQVANNLANVDTAGYKRQNTAFWEMLYNVTADRQRIGKGSHTLT---DHQQG 72

Query: 72  SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPI 131
           +   T   LD A+ G+ +F +++ +G+  TR G F++   G L   +G   + D    P+
Sbjct: 73  NVQQTDNPLDLAINGEGFFRIQTDQGVRYTRAGNFELDPLGQLRMPNGGLVLGD--GGPV 130

Query: 132 QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSG 191
            I +      +  +G+I Q   +I  + + +V+      +   +          +  L  
Sbjct: 131 VIDEAGGEVAIDPQGQIHQNQVMIGQLDIVTVNDLTTLAKEGENLFRLEDDGEEMAALDF 190

Query: 192 VTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
             V++G++E SN NS+ EM  MI L + + +   +I   ++    AI  + 
Sbjct: 191 -QVRQGYVEKSNVNSIEEMTAMIDLYRNYEAQQKMIQGIDEMDDLAISRVG 240


>gi|170758330|ref|YP_001787958.1| flagellar basal body rod protein FlgG [Clostridium botulinum A3
           str. Loch Maree]
 gi|169405319|gb|ACA53730.1| flagellar basal body rod protein [Clostridium botulinum A3 str.
           Loch Maree]
          Length = 263

 Score =  148 bits (374), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 51/264 (19%), Positives = 105/264 (39%), Gaps = 24/264 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI----------KN 50
           M  +     +  +A + +L ++++N++N +TVG++   V F E+V             + 
Sbjct: 1   MLRALWNSKSGLIAQQNKLDSISNNLANVNTVGYKREDVSFQELVQETLKRKGYPTSDRQ 60

Query: 51  DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVT 109
           +I       A+     + + G  ++TG + D A++G  +F +    G     R G F + 
Sbjct: 61  EIQTGTGVKATNWIRDTHQQGILLNTGNKTDLAIDGQGFFRVIMSDGNYAYERSGNFVID 120

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-----------IATM 158
            +G LV  +G    +                       I++ G +           +  +
Sbjct: 121 RNGMLVDENGNRLEIQFQGTEGMQILNRIGGFSRNNINIAEDGSISVKDIDGINKMVGKI 180

Query: 159 GLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
            +Y+   S  FV    +   P      +   + V++ +GFLE+SN ++  EM +MI   +
Sbjct: 181 NIYNAVGSDAFVSIGRNLYIPQ-EGVNVFANNDVSILQGFLENSNVDAGKEMTEMIITQR 239

Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242
            F   +  I   ++ M   + N+ 
Sbjct: 240 AFELSSRGIKTADE-MWGIVNNMR 262


>gi|56551505|ref|YP_162344.1| flagellar basal body rod protein FlgG [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|241761149|ref|ZP_04759238.1| flagellar basal-body rod protein FlgG [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|260752888|ref|YP_003225781.1| flagellar basal body rod protein FlgG [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
 gi|4378856|gb|AAD19724.1| flagellar basal-body rod protein [Zymomonas mobilis subsp. mobilis
           ZM4]
 gi|56543079|gb|AAV89233.1| flagellar basal-body rod protein FlgG [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|241374768|gb|EER64229.1| flagellar basal-body rod protein FlgG [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|258552251|gb|ACV75197.1| flagellar basal-body rod protein FlgG [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
          Length = 263

 Score =  148 bits (374), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 45/257 (17%), Positives = 93/257 (36%), Gaps = 20/257 (7%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID----------- 53
             +      A   R+  +A+N++N +T  F+  +  F  +    +               
Sbjct: 6   LQVARTGLDAQNTRMRIIANNLANVNTTAFKRDRAAFETLAYQAERQPGAQSTNSYYYAT 65

Query: 54  --QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTD 110
                S V +      +  GSF++TG  LD A+ G  +F ++ P G I  TR G F+++ 
Sbjct: 66  GLTLGSGVQTIATERQETQGSFVNTGNSLDLAVSGVGYFQIQLPDGTIGYTRAGNFQLSQ 125

Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169
           DG +V+  GK  + ++            E   V  + +   +   +  +         G 
Sbjct: 126 DGQIVTDDGKPLIPNINIPQNAEQITIGEDGTVSVQLQGQTQSNQVGQIQTVRFINPAGL 185

Query: 170 VRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224
                +           +           + +G LE SN N + E+  MI   + +   +
Sbjct: 186 QATGQNLYIETQSSGQPQIGLPQQDGMGYILQGELEQSNVNIVQELVDMIETQRAYEVNS 245

Query: 225 TLIDENEKSMLEAIRNI 241
            ++  +++ +    + I
Sbjct: 246 KMVKASDEMLQYINQQI 262


>gi|261211321|ref|ZP_05925609.1| flagellar basal-body rod protein FlgF [Vibrio sp. RC341]
 gi|260839276|gb|EEX65902.1| flagellar basal-body rod protein FlgF [Vibrio sp. RC341]
          Length = 249

 Score =  148 bits (374), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 56/241 (23%), Positives = 102/241 (42%), Gaps = 11/241 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  + ++      Q +   A+N++N  T GFR    +   +      +      F  
Sbjct: 1   MDRALFLAMSGAKQNMQAMQLRANNLANVSTTGFRADLAQARSM--QAYGEGLPTRVFSM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASG 119
           + +   +   GS I+TG +LD  ++G+ W ++ +      LTR+G  ++ + G L++ +G
Sbjct: 59  TERPGNNFAQGSVITTGRDLDVTIQGEGWISVLDKTGKEGLTRNGNLRIDETGLLLNGNG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172
            +PVL     PI +P       +G  G IS + +      +  VD         Q   + 
Sbjct: 119 -HPVLGETGAPITLPVPLNKVEIGGDGTISVRPQGAPADAMEVVDRIKLVRLNDQSLFKD 177

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            N       P T  E  + V +  G LE SN N++ EM  +I L ++F     ++   E+
Sbjct: 178 VNGLFRATDPNTQFEADASVKILTGALEGSNVNAIGEMTSLIDLQRQFEMQVKMMSTAEE 237

Query: 233 S 233
            
Sbjct: 238 M 238


>gi|157376215|ref|YP_001474815.1| flagellar basal body rod protein FlgF [Shewanella sediminis
           HAW-EB3]
 gi|157318589|gb|ABV37687.1| flagellar basal-body rod protein FlgF [Shewanella sediminis
           HAW-EB3]
          Length = 247

 Score =  148 bits (374), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 44/238 (18%), Positives = 91/238 (38%), Gaps = 7/238 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + ++        L+  A+N++N +T GF++   +   +      +      F  
Sbjct: 1   MDKLLYVAMSGAKQNMNSLAVRANNLANANTDGFKSDMAQARSM--QAFGEGLPTRVFAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119
           +     +   G   +TG +LD A++GD W A+++  G    TR G       G L +  G
Sbjct: 59  TESPSANFASGPIKTTGRDLDVAVKGDGWIAVQAGDGGEAYTRSGSLSFDTTGLLRNDRG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
              + D   + + +P +           +  +G     +        V+     + R + 
Sbjct: 119 NPVMGDSGPIVLPLPIEKIEIAQDGIISVRPQGATAEVIEEVGRIKLVNPGNQNMMRGSD 178

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           G+   +          V V+ G +E SN N++ EM  +I + ++F     ++   E+ 
Sbjct: 179 GLFRLMSGENAPADPFVGVESGAVEGSNVNAVDEMVNLIDIQRQFEMQVKMMKTAEEM 236


>gi|163852464|ref|YP_001640507.1| flagellar basal-body rod protein FlgG [Methylobacterium extorquens
           PA1]
 gi|218531220|ref|YP_002422036.1| flagellar basal-body rod protein FlgG [Methylobacterium
           chloromethanicum CM4]
 gi|240139801|ref|YP_002964278.1| flagellar biosynthesis; cell-distal portion of basal-body rod
           [Methylobacterium extorquens AM1]
 gi|254562216|ref|YP_003069311.1| cell-distal portion of basal-body rod biosynthesis protein
           [Methylobacterium extorquens DM4]
 gi|163664069|gb|ABY31436.1| flagellar basal-body rod protein FlgG [Methylobacterium extorquens
           PA1]
 gi|218523523|gb|ACK84108.1| flagellar basal-body rod protein FlgG [Methylobacterium
           chloromethanicum CM4]
 gi|240009775|gb|ACS41001.1| flagellar biosynthesis; cell-distal portion of basal-body rod
           [Methylobacterium extorquens AM1]
 gi|254269494|emb|CAX25460.1| flagellar biosynthesis; cell-distal portion of basal-body rod
           [Methylobacterium extorquens DM4]
          Length = 263

 Score =  148 bits (374), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 34/259 (13%), Positives = 81/259 (31%), Gaps = 21/259 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55
             +         A E  +  +++N++N  T G++  +V F +++                
Sbjct: 1   MRALYAAATGMAAQELNVQVISNNIANLRTTGYKRQQVHFQDLLYQNLRRSGSSTSDQNT 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    S V +     +   G    T  + D A+ G+  F +  P      +RDG F
Sbjct: 61  MLPAGLALGSGVKTTSTARAMSQGPLAQTEKDYDVAIRGEGLFRVRLPDGRTAYSRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
            +   G +V+  G      +                V          + +    L     
Sbjct: 121 DLDAQGQMVTRDGYLLDPGVTVPNTATSVTISATGAVQATMPGQTAPQALGQFQLARFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++         P             +++ +LE++N N++ E+  +I   + +
Sbjct: 181 KVGLESIGDNLFVETAASGPAITGLPGSEGFGNLQQRYLEEANVNAVTEISSLIAAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              + ++   ++ +    +
Sbjct: 241 EMNSKVVTAADQMLSTTSQ 259


>gi|163802602|ref|ZP_02196494.1| flagellar L-ring protein precursor H [Vibrio sp. AND4]
 gi|159173685|gb|EDP58504.1| flagellar L-ring protein precursor H [Vibrio sp. AND4]
          Length = 249

 Score =  148 bits (374), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 61/241 (25%), Positives = 101/241 (41%), Gaps = 11/241 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  + ++      Q L   A+N++N  T GFR    +   +      +      F  
Sbjct: 1   MDRALFLAMSGAKQNMQALQLRANNLANVSTTGFRADLAQARSM--QAYGEGLPSRVFSM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119
           + +   +   GS I+TG +LD  +EGD W + ++      LTR+G  KV  +G L +ASG
Sbjct: 59  TERPGHNFAQGSVITTGRDLDVTIEGDGWISVMDHTGKEGLTRNGNLKVDQNGLLTNASG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172
            + VL     PI +P       +G  G IS   +      L  VD         Q   + 
Sbjct: 119 -HVVLGENDAPITLPIPVSKIEIGRDGTISVLPQGAPAEELEVVDRIKLVRTDDQNLFKD 177

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            N       P  P E    ++++ G +E SN N++ EM  +I L ++F     ++   E+
Sbjct: 178 TNGLFRHKTPNQPYEVDGSISIQTGAIEGSNVNAVGEMTALIDLQRQFEMQVKMMSTAEE 237

Query: 233 S 233
            
Sbjct: 238 M 238


>gi|302037627|ref|YP_003797949.1| flagellar basal-body rod protein FlgF [Candidatus Nitrospira
           defluvii]
 gi|300605691|emb|CBK42024.1| Flagellar basal-body rod protein FlgF [Candidatus Nitrospira
           defluvii]
          Length = 255

 Score =  148 bits (373), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 53/260 (20%), Positives = 103/260 (39%), Gaps = 26/260 (10%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-------- 52
           M  +    L+  +A E++L+  A+N++N +T GF+  +  F  +     +          
Sbjct: 1   MNRAIYPILSGAVAQEKQLTVFANNLANVNTAGFKQDQQGFRGLFARASSTGTGVVSGGL 60

Query: 53  ----------DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTR 102
                       +  F        + E G    TG  LD A++ D +F +++P G+  TR
Sbjct: 61  SSAISTRPAGPSERVFAEVHGVRTAFEPGRIRITGNPLDVAIQSDGFFEVKTPDGVRYTR 120

Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162
           +G F +     LV+  G   +        +I        +  +G I   G  I ++ +  
Sbjct: 121 NGIFSLDSQRRLVTNLGHPVM----GTKGEIKVPPGNIQINAEGAIQVDGTPIGSIKVVE 176

Query: 163 VDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222
                G  ++   G+            +   V+ G +E+SN NS+ EM +M+   + + S
Sbjct: 177 FP-ENGMPQKFAEGLFV---GGKPAVSTRPQVQSGHIEESNVNSLSEMVKMMQGMRSYES 232

Query: 223 ITTLIDENEKSMLEAIRNIA 242
              LI   ++    AI+++ 
Sbjct: 233 AQKLIQTMDRMTETAIQDLG 252


>gi|206603526|gb|EDZ40006.1| Putative flagellar basal body rod protein [Leptospirillum sp. Group
           II '5-way CG']
          Length = 267

 Score =  148 bits (373), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 50/265 (18%), Positives = 99/265 (37%), Gaps = 26/265 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK----------- 49
           M+ +    ++   A EQ +  + +N++N +T GF+  +V F   +   +           
Sbjct: 1   MRQAEFALVSGAQAQEQLMDVLTNNLANVNTPGFKRDRVTFRTYLPHREWLHKTPSDQPG 60

Query: 50  -------------NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR 96
                            + +        ++    GSF STG  LD A++G+ +F + +PR
Sbjct: 61  FRMTPWGEFPTPWGMAGKDVPHAGVDGIHVGYAQGSFRSTGNPLDIAIKGEGFFRILTPR 120

Query: 97  GIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156
           G +L+R+GRF +   G LV+  G   + +                V   G + +  +V+ 
Sbjct: 121 GEVLSRNGRFTLDRGGRLVTHEGYGVLGEDGKNIRLPESVPGGIRVKADGTVLKGNRVMG 180

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
            + +   +     + +   G+                V  G  E SN N  +EM +MI  
Sbjct: 181 RLAVVVPENGTEHLAKVGDGLFMGDGKIAPVADPD--VLAGGFESSNVNGTFEMVRMIEA 238

Query: 217 TQKFNSITTLIDENEKSMLEAIRNI 241
            + F +    +    +     + +I
Sbjct: 239 MRSFETHLKALQTLNELTRRTVNDI 263


>gi|126653740|ref|ZP_01725658.1| flagellar hook protein [Bacillus sp. B14905]
 gi|126589704|gb|EAZ83840.1| flagellar hook protein [Bacillus sp. B14905]
          Length = 329

 Score =  148 bits (373), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 55/319 (17%), Positives = 101/319 (31%), Gaps = 80/319 (25%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-------- 52
           M  S   G++     + +L  + +N++N +TVGF+  +V F +++   +           
Sbjct: 8   MLRSMYSGISGLKNFQTKLDVIGNNIANVNTVGFKKGRVLFKDLMSQTQAGASAATATRG 67

Query: 53  ----DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP------------- 95
                Q                GS  STG  LD A+EGD +F +                
Sbjct: 68  GVNPQQVGLGTQLAAIDTIHGGGSLQSTGRGLDLAIEGDGFFMVADANGAPDPDSGFIDE 127

Query: 96  ---RGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNV---------- 142
                 + TR+G F +  +G LV+A GKY V   A   I +   D+  N           
Sbjct: 128 EGFNNTLFTRNGVFYMDSNGYLVNADGKYLVGVSAGEDIVMEADDDGINPDDAPVASGDE 187

Query: 143 -----GEKGEISQKGKVIATMGLYS--------------------------------VDM 165
                 + G ++     +  + + +                                   
Sbjct: 188 GANLFDDDGVLTPDDGTVGPIRIPTTAKEISIGANGTIEYVDLNGERKWAGQLIMAKFPN 247

Query: 166 SQGFVRRENSGISPNIP-----PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
           + G  +   +                       V  G +E SN +   E  +MI   + F
Sbjct: 248 AGGLAKSGGNYYQQTANSGAAYGQVATVAGMGKVVPGAVEMSNVDLSEEFTEMIVAQRGF 307

Query: 221 NSITTLIDENEKSMLEAIR 239
            + T +I  +++ + E + 
Sbjct: 308 QANTRIITTSDEVLQELVN 326


>gi|91225874|ref|ZP_01260843.1| polar flagellar FlgF [Vibrio alginolyticus 12G01]
 gi|254230139|ref|ZP_04923534.1| flagellar basal-body rod protein FlgF [Vibrio sp. Ex25]
 gi|262394938|ref|YP_003286792.1| flagellar basal-body rod protein FlgF [Vibrio sp. Ex25]
 gi|269965423|ref|ZP_06179542.1| flagellar basal-body rod protein FlgF [Vibrio alginolyticus 40B]
 gi|91189524|gb|EAS75800.1| polar flagellar FlgF [Vibrio alginolyticus 12G01]
 gi|151937332|gb|EDN56195.1| flagellar basal-body rod protein FlgF [Vibrio sp. Ex25]
 gi|262338532|gb|ACY52327.1| flagellar basal-body rod protein FlgF [Vibrio sp. Ex25]
 gi|269829902|gb|EEZ84132.1| flagellar basal-body rod protein FlgF [Vibrio alginolyticus 40B]
          Length = 249

 Score =  148 bits (373), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 60/241 (24%), Positives = 101/241 (41%), Gaps = 11/241 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  + ++      Q L   A+N++N  T GFR    +   +      +      F  
Sbjct: 1   MDRALFLAMSGAKQNMQALQLRANNLANVSTTGFRADLAQARSM--QAYGEGHPSRVFSM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASG 119
           + +   +   GS I+TG +LD  +EG  W ++ +      LTR+G  KV  +G L +ASG
Sbjct: 59  TERPGHNFAQGSVITTGRDLDVTIEGSGWISVLDHTGKEGLTRNGNLKVDQNGMLTNASG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172
            + VL     PI +P       +G  G IS   +        +VD         Q   + 
Sbjct: 119 -HLVLGENDAPITLPIPLSKIEIGRDGTISVLPQGAPAEEFQAVDRIKLVKPNDQSLFKD 177

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            N       P  P E  + V+++ G +E SN N++ EM  +I L ++F     ++   E+
Sbjct: 178 TNGLFRHKTPNQPYEADATVSLQTGAIEGSNVNAVGEMTALIDLQRQFEMQVKMMSTAEE 237

Query: 233 S 233
            
Sbjct: 238 M 238


>gi|167835112|ref|ZP_02461995.1| flagellar basal body rod protein FlgF [Burkholderia thailandensis
           MSMB43]
          Length = 253

 Score =  148 bits (373), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 54/250 (21%), Positives = 85/250 (34%), Gaps = 10/250 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-----QK 55
           M       +       ++ S VA+N++N  T GFR     F  V     +          
Sbjct: 1   MDRLIYTAMTGAAQSLEQQSVVANNLANASTTGFRAQLATFRAVPMNFDDGSGNVDPATT 60

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSL 114
            ++  S         G    TG  LD A++G  W ++  P      TR G   V  +G L
Sbjct: 61  RTYTLSSTPGADFAPGPIERTGNPLDVAVQGPGWLSVMLPDGTEAYTRAGNLHVDQNGQL 120

Query: 115 VSASGKYPVLDMAS---VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171
           V+A+    V +       P           V           V     L  V+     ++
Sbjct: 121 VTANNLPVVGNGGPLAVPPNAQLTIGADGTVSALMPGDPPTAVAMIDQLKLVNPDPATMK 180

Query: 172 RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
           R + G+       P +  + V V    LE SN N +  M  MI   + F   T LI   +
Sbjct: 181 RGDDGLFRTADGNPADADAAVKVVPNSLEGSNVNPVAAMVSMIDNARAFELQTKLIQSAD 240

Query: 232 KSMLEAIRNI 241
           ++  +A   +
Sbjct: 241 QN-EQAANQL 249


>gi|288574696|ref|ZP_06393053.1| protein of unknown function DUF1078 domain protein
           [Dethiosulfovibrio peptidovorans DSM 11002]
 gi|288570437|gb|EFC91994.1| protein of unknown function DUF1078 domain protein
           [Dethiosulfovibrio peptidovorans DSM 11002]
          Length = 262

 Score =  148 bits (373), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 47/263 (17%), Positives = 92/263 (34%), Gaps = 24/263 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDIDQKIS 57
           M      G++A +  +      A+N++N DT GFR  K     F EV+    +    +  
Sbjct: 1   MHKGIYAGVSAMMVQQGVTDCAANNLANVDTAGFRARKPIAKSFPEVLMERVDPAKGQGE 60

Query: 58  FVASGKEYLSKEVGSFIS----------------TGTELDFALEGDAWFA--LESPRGII 99
                         S                   T + +D AL  +  F    +      
Sbjct: 61  IPPWPWRSHPIGNASMNQVLSETYMSTDEGNLQVTDSPMDVALTDEEGFFVLQDGEGNQF 120

Query: 100 LTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG 159
            +R G F V + G LV+  G   V D   + +    +    +  + G++   G  +A + 
Sbjct: 121 YSRSGHFLVNEGGQLVNPDGYLLVGDGGPIDV---GEAAAVSFTDDGQVIADGIAVAQID 177

Query: 160 LYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
           +   +      +   + ++          +    V  G LE SN N + EM ++I   + 
Sbjct: 178 IVGFESPTALRQMGKNLLAETEDSGAPAPVEVPQVAVGVLERSNVNVVEEMVRLIEAQRA 237

Query: 220 FNSITTLIDENEKSMLEAIRNIA 242
           + + +  I  ++    + I ++A
Sbjct: 238 YEAASKGIQTSDDMTGQLITSLA 260


>gi|294140186|ref|YP_003556164.1| flagellar basal-body rod protein FlgF [Shewanella violacea DSS12]
 gi|293326655|dbj|BAJ01386.1| flagellar basal-body rod protein FlgF [Shewanella violacea DSS12]
          Length = 247

 Score =  148 bits (373), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 93/238 (39%), Gaps = 7/238 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + ++        L+  A+N++N +T GF+    +   +      +      F  
Sbjct: 1   MDKLLYVAMSGAKQNMNSLAVRANNLANANTDGFKADMEQARSM--QAFGEGLPTRVFAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119
           +         G   +TG +LD A++GD W A++S  G    TR G       G L +  G
Sbjct: 59  TESPSADFAAGPIKTTGRDLDIAVKGDGWIAVQSADGGEAYTRSGSLSFDTTGLLRNDRG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG---KVIATMGLYSVDMS-QGFVRRENS 175
              + D   + + +P +    +      +   G   +VI  +G   +       + R   
Sbjct: 119 NPIMGDSGPIVLPLPIEKVSISQDGIISVRPLGSTAEVIEVVGRIKLVNPGNQNLMRGED 178

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           G+   I        + +T++ G +E SN N++ EM  +I + ++F     ++   E+ 
Sbjct: 179 GLFRLISGDNAPADAFITIESGAVEGSNVNAVSEMVALIDIQRQFEMQVKMMKTAEEM 236


>gi|188587424|ref|YP_001918969.1| protein of unknown function DUF1078 domain protein [Natranaerobius
           thermophilus JW/NM-WN-LF]
 gi|179352111|gb|ACB86381.1| protein of unknown function DUF1078 domain protein [Natranaerobius
           thermophilus JW/NM-WN-LF]
          Length = 280

 Score =  148 bits (372), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 54/276 (19%), Positives = 102/276 (36%), Gaps = 34/276 (12%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51
           M        +  L  ++     ++NM+N +T G +       +FS ++ +  ND      
Sbjct: 1   MLRGLYTSSSGMLTQQRVQEVKSNNMANLNTTGHKRDMSVKSEFSNMLISRINDPENIGP 60

Query: 52  -----------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL 100
                      I +  + V   +       G    TG  LD  LEGD +F +  P G   
Sbjct: 61  PQSPQVDNRPYIGELGTGVLLDETVKDFSQGPLKETGNTLDLGLEGDGFFTVNGPDGEEY 120

Query: 101 -TRDGRFK-----VTDDGSLVSASGKYPVLDMASVP-IQIPQKDEIFNVGEKGEISQKGK 153
            TR G         +++ +LV+  G   + +   +            N         + +
Sbjct: 121 FTRSGALTLSYDETSEEATLVTLQGDPVLGEEGIIQLSGEKDITVTENGAIYQGQDDEAE 180

Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPL-------EDLSGVTVKRGFLEDSNANS 206
           +I  + L + +  QG  R  ++ +                ED   ++V +G +E SN NS
Sbjct: 181 LIDNLALVNFENPQGLARYGDNLLEQTEESGAPQELDLDGEDFGILSVHQGKIESSNVNS 240

Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           + EM  MI+  + + S    I  ++ ++  A+ +I 
Sbjct: 241 VDEMTGMINALRAYESNQRAIQGHDDTLERAVNDIG 276


>gi|254519397|ref|ZP_05131453.1| flagellar basal body rod protein FlgG [Clostridium sp. 7_2_43FAA]
 gi|226913146|gb|EEH98347.1| flagellar basal body rod protein FlgG [Clostridium sp. 7_2_43FAA]
          Length = 257

 Score =  148 bits (372), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 43/258 (16%), Positives = 93/258 (36%), Gaps = 17/258 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +   G     A + +L  +++N++N+ T+G++ I V F +++    +          
Sbjct: 1   MLRTLWTGKTGMNANQDKLDAISNNIANSTTMGYKKIDVGFKDLLTESLDRNGIPLNDKD 60

Query: 54  -QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDD 111
               +   + + +     G    T    D +++G  +F + S       TRDG   +   
Sbjct: 61  SVIGTGTRTSEWFRDNSQGMLQETLRSTDLSIDGLGYFKIISDNGQEAYTRDGALAIDSR 120

Query: 112 GSLVSASGKYPVLD------MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           G LV   G    L+        +V                 +       +A + +Y+   
Sbjct: 121 GRLVDNRGNKLELNYLNGYSEGNVVFNKDNFLVDKKGQVYIKDKGNFIQVAEIPVYTAVG 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225
            + F+      +    P   ++  +   + +G LE SN +   E  +MI   + F   + 
Sbjct: 181 DRAFLS-IGDNLFTPSPGVEVQRTTDFDIYQGSLEGSNVDIATEFSEMILTQRAFELSSR 239

Query: 226 LIDENEKSMLEAIRNIAS 243
            +   ++ M   I N+ +
Sbjct: 240 GVKTADE-MWGMINNMRA 256


>gi|149912833|ref|ZP_01901367.1| flagellar basal-body rod protein FlgF, putative [Roseobacter sp.
           AzwK-3b]
 gi|149813239|gb|EDM73065.1| flagellar basal-body rod protein FlgF, putative [Roseobacter sp.
           AzwK-3b]
          Length = 237

 Score =  148 bits (372), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 61/241 (25%), Positives = 111/241 (46%), Gaps = 6/241 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M+ +    L  Q  L + +  +A+N++N  T G+R   + F+E V  ++N     IS   
Sbjct: 1   MENTGYTTLTRQSGLLREIQVIANNIANAATTGYREESLIFAEYVKRVEN--GPSISMAT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
                +S   G    TG  LDFA+EGD +F +E+  G  LTR G F ++  G L +  G 
Sbjct: 59  PSARSISSLQGGLQPTGGTLDFAIEGDGFFLIEAADGNRLTRAGSFSLSAAGELATHDGH 118

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
              LD    P+ +P       V   G IS +G++I  +GL         +R   +    +
Sbjct: 119 RV-LDAGGAPVFLPPNATDLRVAADGTISAEGRLIGQIGLVRPLDPNDLIREGGTLFRTD 177

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
           +   P+E      + +GFLE SN + + ++ +M+ + + +    + ++     + E ++ 
Sbjct: 178 VGTKPVEG---SRILQGFLEGSNVDPIAQVARMVEVQRAYEMGQSFLENENTRIRETLKT 234

Query: 241 I 241
           +
Sbjct: 235 M 235


>gi|75675315|ref|YP_317736.1| flagellar basal body rod protein FlgF [Nitrobacter winogradskyi
           Nb-255]
 gi|74420185|gb|ABA04384.1| Flagellar basal body rod protein [Nitrobacter winogradskyi Nb-255]
          Length = 255

 Score =  148 bits (372), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 56/252 (22%), Positives = 114/252 (45%), Gaps = 11/252 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN-----DIDQK 55
           M+ +  IGL+ Q+ LE+++  +A+N++N  T G++     F+E +    +       D++
Sbjct: 1   MENTLLIGLSRQMMLERQMDVIANNVANVTTNGYKADHSLFNEYLMPGAHEDNFVGRDRR 60

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115
           +SFV     +     G    T   LD A++G+A+  +++P G   TRDG  ++   G LV
Sbjct: 61  LSFVQDRATFHDFAGGPTEQTKNPLDVAIDGNAFLVVQTPNGERYTRDGGLQINAQGQLV 120

Query: 116 SASGKYPVLDM-----ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170
           +A G   +              I   D+      +G  +    +   + L S    Q  V
Sbjct: 121 TAGGHPVLGSNGPIRFQQTDRNITISDDGTVTVIEGINNATNAIRGRLRLVSFPQVQRLV 180

Query: 171 RRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
           +  ++  +        +  +   + +GF+E SN N++ EM +++ +++ +  + TL+ + 
Sbjct: 181 KEGSNLYAAGEGNFARQ-DTQARINQGFIERSNVNAVTEMSRLVEVSRAYTQMATLLQQQ 239

Query: 231 EKSMLEAIRNIA 242
                 AI  +A
Sbjct: 240 SDLQRSAIEKLA 251


>gi|134300226|ref|YP_001113722.1| hypothetical protein Dred_2387 [Desulfotomaculum reducens MI-1]
 gi|134052926|gb|ABO50897.1| protein of unknown function DUF1078 domain protein
           [Desulfotomaculum reducens MI-1]
          Length = 257

 Score =  148 bits (372), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 60/255 (23%), Positives = 107/255 (41%), Gaps = 14/255 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVV---------GAI 48
           M     I + +    + +L+ V +N+SN  T G++   +    F+E +         G  
Sbjct: 1   MLRGLYITMNSLNVQQAKLNNVTNNLSNLSTTGYKKNNMVDSQFAESLQLALENHGPGGK 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFK 107
           +  I + I      + ++    G    TG   D ALEG+ +F +E   G   LTRDG F 
Sbjct: 61  RQPIGKGILGNMITQVHIDYGQGPLTETGKLTDMALEGNGYFVVEDENGEQFLTRDGSFH 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           V ++G+L++  G    L      I    +D          + Q  +      L  V++S+
Sbjct: 121 VNEEGALLTGDGFRV-LGEGGPIILEKPEDFTLKEDGTIMVGQGTEAEEIDKLQIVEVSE 179

Query: 168 GFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
             + ++  G     P    E     TV +G+LE SN + + EM  +I + + + S   LI
Sbjct: 180 PALLKKTDGNYFQDPEGVAEAAVSTTVTQGWLEKSNVDPVQEMINIIPVARIYESSQKLI 239

Query: 228 DENEKSMLEAIRNIA 242
              ++ + +AI  + 
Sbjct: 240 QIQDELLDKAINQVG 254


>gi|91792665|ref|YP_562316.1| flagellar basal body rod protein FlgF [Shewanella denitrificans
           OS217]
 gi|91714667|gb|ABE54593.1| Flagellar basal-body rod FlgF [Shewanella denitrificans OS217]
          Length = 247

 Score =  147 bits (371), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 43/240 (17%), Positives = 94/240 (39%), Gaps = 7/240 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + ++        L+  A+N++N +T GF++   +   +      +      F  
Sbjct: 1   MDKFLYVAMSGAKQNMSALAVRANNLANANTDGFKSDLTQARSM--QAFGEGLPSRVFAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +       + G+  +TG +LD A++GD W A+++P      TR G  K  + G L+++  
Sbjct: 59  TEIATSDFKAGALKTTGRDLDIAVKGDGWIAVQAPDGSEAYTRSGGLKFDNTGLLLNSRN 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS----VDMSQGFVRRENS 175
              + +   + + +P      +      I  +G     +   +    V+     + R   
Sbjct: 119 NPVMGNSGPIVLPLPIDKLQISPDGIISIRPQGATAEVIEEVARIKLVNPDNSQMMRGED 178

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
           G+              V V+ G +E SN N + EM  +I + +++     ++   E++  
Sbjct: 179 GLFRLTSGDVAAKDPSVQVESGAIEASNVNPVEEMVALISIQRQYEMQVKMMKTAEETDQ 238


>gi|220924578|ref|YP_002499880.1| flagellar basal-body rod protein FlgG [Methylobacterium nodulans
           ORS 2060]
 gi|219949185|gb|ACL59577.1| flagellar basal-body rod protein FlgG [Methylobacterium nodulans
           ORS 2060]
          Length = 263

 Score =  147 bits (371), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 35/259 (13%), Positives = 85/259 (32%), Gaps = 21/259 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55
             +         A E  +  +++N++N  T G++  +  F +++                
Sbjct: 1   MRALYAAATGMAAQELNVQVISNNIANLRTTGYKRQQAHFQDLLYQNLRRAGSATSDQGN 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    S V +         G+  ST    D A+ G+ +F +  P      TRDG F
Sbjct: 61  QLPAGLALGSGVKTTSTARVMSQGTLSSTEKTYDIAIRGEGFFQITLPDGRTAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165
            +   G +V+  G      +                V          + +  + L     
Sbjct: 121 DLDSQGQIVTRDGYLINPSITVPNNATGVTISASGMVQATVPGQTAPQNLGQIQLARFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++  +  +   P    +        +++ +LE++N N++ E+  +I   + +
Sbjct: 181 KVGLESIGDNLFTETLASGPAITGNPGAEGFGNLQQSYLEEANVNAVTEISSLIAAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              + ++   ++ +    +
Sbjct: 241 EMNSKVVTAADQMLSTTSQ 259


>gi|167568108|ref|ZP_02361024.1| flagellar basal body rod protein FlgF [Burkholderia oklahomensis
           EO147]
 gi|167574226|ref|ZP_02367100.1| flagellar basal body rod protein FlgF [Burkholderia oklahomensis
           C6786]
          Length = 253

 Score =  147 bits (371), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 55/250 (22%), Positives = 86/250 (34%), Gaps = 10/250 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-----QK 55
           M       +       ++ S VA+N++NT T GFR     F  V     +          
Sbjct: 1   MDRLIYTAMTGATQSLEQQSVVANNLANTSTTGFRAQLATFRAVPMNFDDGSGNVDPSTT 60

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSL 114
            ++  S         G    TG  LD A++G  W ++  P      TR G   V  +G L
Sbjct: 61  RTYTLSSTPVADFTPGPIERTGNPLDVAVQGPGWLSVMLPDGTEAYTRAGNLHVDQNGQL 120

Query: 115 VSASGKYPVLDMAS---VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171
           V+A+    V +       P       +   V           V     L  V+     ++
Sbjct: 121 VTANNLPVVGNGGPLAVPPNAQLTIGQDGTVSALMPGDPPTAVAMIDQLKLVNPDPAAMK 180

Query: 172 RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
           R + G+       P +    V V    LE SN N +  M  MI   + F   T LI   +
Sbjct: 181 RGDDGLFRTADGNPADADPAVRVVPNSLEGSNVNPVAAMVSMIDNARAFELQTKLIQSAD 240

Query: 232 KSMLEAIRNI 241
           ++  +A   +
Sbjct: 241 QN-EQAANQL 249


>gi|331269338|ref|YP_004395830.1| flagellar basal-body rod protein FlgG [Clostridium botulinum
           BKT015925]
 gi|329125888|gb|AEB75833.1| flagellar basal-body rod protein FlgG [Clostridium botulinum
           BKT015925]
          Length = 263

 Score =  147 bits (371), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 50/265 (18%), Positives = 105/265 (39%), Gaps = 27/265 (10%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVV----------GA 47
           M       ++  +  E     +++N++N  TVG++   +    F +V+            
Sbjct: 1   MIRGIYTAVSGLINQEAIQDVISNNLANATTVGYKKDDLITRKFKDVMLHNYDKVVRGKN 60

Query: 48  IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF----ALESPRGIILTRD 103
           ++NDI +        +   +   G    TG   DFA++G+ +F            + TRD
Sbjct: 61  VRNDIGELSMGSKIDETCTNYSQGVLNDTGKSTDFAIQGNGFFVVSRNGRVNNQNLYTRD 120

Query: 104 GRFKVTDDGSLVSASGKYP------VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157
           G F +  +G LV++SG             + + + +          ++GEI   G+    
Sbjct: 121 GHFHIDRNGYLVNSSGDKVIGRNLANGANSPINVLVNNSPAKMACNDRGEIYLNGRPAFK 180

Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217
           M + +    +   + +++  S   P     +   V VK+  LE SN N M E+  M+   
Sbjct: 181 MQVVNFGDYKSLRKIQDNLYSGTNP----RETDNVIVKQNCLEKSNVNVMAEVSDMMMTM 236

Query: 218 QKFNSITTLIDENEKSMLEAIRNIA 242
           + F S   ++   ++++ + +  + 
Sbjct: 237 RNFESNQKIVQALDETLGKTVNEVG 261


>gi|323341378|ref|ZP_08081622.1| flagellar basal-body rod protein FlgG [Lactobacillus ruminis ATCC
           25644]
 gi|323091255|gb|EFZ33883.1| flagellar basal-body rod protein FlgG [Lactobacillus ruminis ATCC
           25644]
          Length = 301

 Score =  147 bits (371), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 50/298 (16%), Positives = 102/298 (34%), Gaps = 59/298 (19%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50
           M  S   G++     + ++  +A+N+SN +T GF+  +V F ++V               
Sbjct: 1   MLRSLYSGVSGMKGFQTQMDVIANNVSNVNTHGFKAGRVLFQDMVSQNTTSASAPGLGLG 60

Query: 51  --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG------IILTR 102
             +  Q    + +G        G+  STG ++D  ++G+ +F +              TR
Sbjct: 61  GVNGKQVGLGMQTGAVDTMTGRGNMESTGQDMDLYIQGEGYFVVRKEATADSDAVTYYTR 120

Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLY- 161
           DG FK    G LV+++G +         I     +   +    G  +  G  +A + +  
Sbjct: 121 DGAFKRDSQGLLVNSNGYHVKGQPTKGNIPAAWDNNFKSENYFGNPNATGSNLADINIPE 180

Query: 162 -----------------------------------SVDMSQGFVRRENSGISPNIPPTPL 186
                                                +   G  +  ++  S        
Sbjct: 181 TVNGQRFESVTIDNSGLVVAKYGDTRYAMGKIELAKFNNPSGLKKSGSNNFSVTNNSGDP 240

Query: 187 ED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
                      T++ GFLE SN +   +  QMI  ++ + + +  I  +++ + E + 
Sbjct: 241 NFATPGLGGTGTLESGFLEMSNVDLADQFSQMIIASRAYQANSRSITTSDEMLQELLN 298


>gi|114330362|ref|YP_746584.1| flagellar basal body rod protein FlgF [Nitrosomonas eutropha C91]
 gi|114307376|gb|ABI58619.1| flagellar basal-body rod protein FlgF [Nitrosomonas eutropha C91]
          Length = 247

 Score =  147 bits (371), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 50/241 (20%), Positives = 90/241 (37%), Gaps = 6/241 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       +   L    + +TV+ N++N  T GFR     F  V   +  +     +FV 
Sbjct: 1   MDRLIYTAMTGALHTLTQQATVSHNLANASTTGFRAQADAFRAV--PVYGESLPTRAFVL 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
                     G+   T   LD A++G  W  ++        TR G  K   +G L +  G
Sbjct: 59  DSTTGADFTPGAIQQTDRPLDVAIQGSGWITVQLENGEEAYTRHGNLKTDANGVLQTQQG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176
                +   + I    +  I   G    +    ++ A   +     VD     + R + G
Sbjct: 119 FNIKGETGPITIPPDSRVAIGKDGSVSVLPSDSRITAVSIIGRIKLVDPPAEQLVRGDDG 178

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           +              V +  G LE SN N++ EM +MI L ++F+    +++  +++  +
Sbjct: 179 LFRLKQGGEAPASGKVALIDGALESSNVNAVSEMVKMITLARQFDMQMKMLENAQQNAQQ 238

Query: 237 A 237
           A
Sbjct: 239 A 239


>gi|27363704|ref|NP_759232.1| flagellar basal body rod protein FlgF [Vibrio vulnificus CMCP6]
 gi|27359820|gb|AAO08759.1| flagellar basal-body rod protein FlgF [Vibrio vulnificus CMCP6]
          Length = 249

 Score =  147 bits (371), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 60/241 (24%), Positives = 96/241 (39%), Gaps = 11/241 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  + ++      Q L   A+N++N  T GFR    +   +      D      F  
Sbjct: 1   MDRALFLAMSGAKQNMQALQLRANNLANVSTTGFRADLAQARSM--QAYGDGLPTRVFSM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESP-RGIILTRDGRFKVTDDGSLVSASG 119
           + +   +   GS I+TG +LD  +EG+ W  +        LTR+G  KV  +G L +ASG
Sbjct: 59  TERPGHNFAQGSVITTGRDLDITIEGNGWIGVMDKLGKEGLTRNGNLKVDQNGLLSNASG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172
            + VL     PI IP       +G  G IS   +      +  +D             + 
Sbjct: 119 -HLVLGEGGAPITIPLPVSKIEIGRDGTISVLPQGAPAEEMEEIDRIKLVKTNDSALFKD 177

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            N       P  P E    V +  G +E SN N++ EM  +I L ++F     ++   E+
Sbjct: 178 TNGLFRHKEPNQPYEADPTVQIMTGAIEGSNVNAVGEMTALIDLQRQFEMQVKMMSTAEE 237

Query: 233 S 233
            
Sbjct: 238 M 238


>gi|187778772|ref|ZP_02995245.1| hypothetical protein CLOSPO_02367 [Clostridium sporogenes ATCC
           15579]
 gi|187772397|gb|EDU36199.1| hypothetical protein CLOSPO_02367 [Clostridium sporogenes ATCC
           15579]
          Length = 266

 Score =  147 bits (371), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 52/263 (19%), Positives = 106/263 (40%), Gaps = 24/263 (9%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI----------KND 51
             +     +  +A + +L ++++N++N +TVG++   V F E+V             + +
Sbjct: 5   LRALWNSKSGLIAQQNKLDSISNNLANVNTVGYKREDVSFQELVQETLKRKGYPTSDRPE 64

Query: 52  IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTD 110
           I       A+     + + G  ++TG + D A++G  +F +  P G     R G F +  
Sbjct: 65  IQTGTGVKATNWIRDTHQQGILLNTGNKTDLAIDGQGFFRVIMPDGNYAYERSGNFVIDR 124

Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-----------IATMG 159
           +G LV  +G    + +                     I++ G +           I  + 
Sbjct: 125 NGMLVDENGNRLEIQLQQPAGSQILNRIGGFNKNNINIAEDGSISAKDVDGINKMIGKIN 184

Query: 160 LYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
           +Y+   S  FV    +   P      +   + V++ +GFLE+SN ++  EM +MI   + 
Sbjct: 185 IYNAVGSDAFVSIGRNLYIPQ-EGVNVFVNNDVSMLQGFLENSNVDAGKEMTEMIITQRA 243

Query: 220 FNSITTLIDENEKSMLEAIRNIA 242
           F   +  I   ++ M   + N+ 
Sbjct: 244 FELSSRGIKTADE-MWGIVNNLR 265


>gi|182679722|ref|YP_001833868.1| flagellar basal body rod protein [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|182635605|gb|ACB96379.1| flagellar basal body rod protein [Beijerinckia indica subsp. indica
           ATCC 9039]
          Length = 240

 Score =  147 bits (371), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 68/242 (28%), Positives = 135/242 (55%), Gaps = 4/242 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           MQ++  + L+ Q+ LE+RL+T+A N++N    G+R   V FS ++          +++  
Sbjct: 1   MQSNLYVSLSGQVMLERRLTTIATNIANQSVAGYRAEDVNFSTILSKTD---KYPVAYAG 57

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           +G+ ++S+E G    T   LD A++GD WFA+++P G + TRDGR  +   G LV +   
Sbjct: 58  TGRTHISREAGLLSKTDNPLDVAIQGDGWFAMQTPAGTVYTRDGRMHMQATGELV-SVDN 116

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
           +P+LD  + P+ +        + + G I+Q G+ I  +GL+ +D +       NSG+  +
Sbjct: 117 HPILDAGNTPLLVDPDAGPITIAKDGMITQNGRQIGAIGLFQLDDNAKLQHYHNSGVLSD 176

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
                + D +   + +G++E +N N + E+ ++I +++ F  I+T ++ +E S+ ++I+ 
Sbjct: 177 RQGVAVLDFTANGIAQGYVESANVNPILELSKLITVSRSFEQISTAMENSESSLRDSIKT 236

Query: 241 IA 242
           + 
Sbjct: 237 LG 238


>gi|195952534|ref|YP_002120824.1| flagellar basal-body rod protein FlgG [Hydrogenobaculum sp.
           Y04AAS1]
 gi|195932146|gb|ACG56846.1| flagellar basal-body rod protein FlgG [Hydrogenobaculum sp.
           Y04AAS1]
          Length = 263

 Score =  147 bits (371), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 51/259 (19%), Positives = 92/259 (35%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +     A   A +Q L  +++NM+N DTVG++ ++  F +++     D         
Sbjct: 1   MFRAMWTSAAGMTAQQQNLDVISNNMANVDTVGYKQLQPVFDDLIYQTVKDPGMETSQNS 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q          Y     G+   TG  LD A++G+ +F +  P   I  TR+G+ 
Sbjct: 61  QNPIGYQLGLGAYIDGTYGIFTQGNVQQTGNPLDVAIQGNGFFQVAMPDGTIAYTRNGQL 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG-KVIATMGLYSVDM 165
           ++  +G LV+A G      +   P                   Q+G + +  + + +   
Sbjct: 121 QLDANGDLVTADGYLIQPQITVPPNATSVNIGPDGTVAVTIPGQQGVQTVGQLQMANFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G  R  N+              +       T+  G+ E SN N + EM  +I     +
Sbjct: 181 PAGLKRIGNNLFEQTQASGNPIVSNPGTQGLGTLLSGYTEASNVNIVNEMVNLIIAENAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              +  I      +  A  
Sbjct: 241 QFNSKGITAANTMLSTAAN 259


>gi|126175145|ref|YP_001051294.1| flagellar basal body rod protein FlgF [Shewanella baltica OS155]
 gi|125998350|gb|ABN62425.1| flagellar basal-body rod protein FlgF [Shewanella baltica OS155]
          Length = 247

 Score =  147 bits (371), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 45/238 (18%), Positives = 90/238 (37%), Gaps = 7/238 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + ++        L+  A+N++N +T GF++   +   +      +      F  
Sbjct: 1   MDKFLYVAMSGAKQNMNELALRANNLANANTDGFKSDMAQARSM--QAFGEGLPTRVFAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASG 119
           +     +   G   +TG +LD A++GD WFA++        TR G       G L +  G
Sbjct: 59  TESPSANFRSGPIKTTGRDLDVAIKGDGWFAVQAKDGSEAYTRAGSLSFDSTGLLHNDRG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
              + D   + + +P +    +      +  +G     +        V+     + R   
Sbjct: 119 NPVMGDAGPIVLPLPIEKVSISQDGIISVRPQGATAEVVEEVGRLKLVNPGNAEMMRGED 178

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           G+   +          V V+ G +E SN N + EM  +I L ++F     ++   E++
Sbjct: 179 GLFRLMSGNIAPADPSVGVESGAVEGSNVNPVDEMVSLIDLQRQFELQVKMMKTAEEN 236


>gi|118444095|ref|YP_878000.1| flagellar basal body rod protein FlgG [Clostridium novyi NT]
 gi|118134551|gb|ABK61595.1| flagellar basal-body rod protein FlgG [Clostridium novyi NT]
          Length = 258

 Score =  147 bits (370), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 50/257 (19%), Positives = 111/257 (43%), Gaps = 16/257 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S     +   A  ++L+T+++NM+N+ TVG++ + VKF++++    + +        
Sbjct: 1   MLRSIWNSRSGMAAEMEKLNTISNNMANSTTVGYKRVDVKFNDLMQENLDRLGYPVTKGK 60

Query: 56  ----ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTD 110
                + V + +       G+ + TG   D A++G+ +F ++        TR G F + +
Sbjct: 61  PQFTGTGVRATEIERDNSQGNLLQTGNNTDIAIDGEGFFKVQDGEGRTFYTRGGSFNIDN 120

Query: 111 DGSLVSASGKYPVL----DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
            G++V  SG   ++     +      I  K+  F + E+G +  KG     + ++    +
Sbjct: 121 LGTVVDKSGNRLIILNEAGVNVNKPGIGFKNSSFIINEEGYVVGKGNENLRIPIFEPKGN 180

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGV-TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225
                  ++    N P   +E  +   ++ +G+ E SN +   EM  +I   + F   ++
Sbjct: 181 DCMKSIGDNLYVCNEPNLIVEKDTKDFSLLQGYTEQSNVDLGKEMADLIITQRAFQLNSS 240

Query: 226 LIDENEKSMLEAIRNIA 242
            +   ++ M     N+ 
Sbjct: 241 ALKTADE-MWGMANNLR 256


>gi|71906392|ref|YP_283979.1| hypothetical protein Daro_0753 [Dechloromonas aromatica RCB]
 gi|71846013|gb|AAZ45509.1| Protein of unknown function DUF1078 [Dechloromonas aromatica RCB]
          Length = 247

 Score =  147 bits (370), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 51/241 (21%), Positives = 89/241 (36%), Gaps = 6/241 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       +     +  + +  A+N++N  T+GF+  + +F  V   ++ +     +FV 
Sbjct: 1   MDRLIYTAMTGAKHVFMQQAGTANNLANASTIGFKAQEHRFRAV--PVQGEGMPTRAFVV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
                   + G  + TG  LD A++G  W  ++ P      TR G   V   G L + SG
Sbjct: 59  DASVSDVMDEGPLMFTGRNLDVAVQGKGWIGVQLPDGSEAYTRAGSLDVDVTGLLQTKSG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176
                D   + I      EI   G    +   G       +     V+  +  + R   G
Sbjct: 119 YPVAGDGGPINIPPDNTIEIAPDGTVSVVPTFGTPNNANAIGRIKLVNPPEADLVRGADG 178

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           +       P    + V +  G LE SN N    M  +I L+++F     L+   + +   
Sbjct: 179 LFRLRNNQPAVADANVKLAAGTLEGSNVNVTDAMVNLISLSRQFEMQIKLLQTADTNAQR 238

Query: 237 A 237
           A
Sbjct: 239 A 239


>gi|127512280|ref|YP_001093477.1| flagellar basal body rod protein FlgF [Shewanella loihica PV-4]
 gi|126637575|gb|ABO23218.1| flagellar basal-body rod protein FlgF [Shewanella loihica PV-4]
          Length = 247

 Score =  147 bits (370), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 45/240 (18%), Positives = 89/240 (37%), Gaps = 7/240 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + ++        L+  A+N++N +T GF++   +   +      +      F  
Sbjct: 1   MDKLLYVAMSGAKQNMNSLAVRANNLANANTDGFKSDLEQARSM--QAFGEGLPTRVFSM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119
           +     +   G   +TG +LD A++GD W A+++   G   TR G       G L +  G
Sbjct: 59  TENPSANFAAGPIKTTGRDLDIAVKGDGWIAVQAVDGGEAYTRSGSLSFDTSGLLRNDRG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
              + D   + + +P +           +   G     +        V+     + R   
Sbjct: 119 NPVMGDAGPIVLPLPIEKVEIAQDGTISVRPLGSTAEVIEEVGRIKLVNPGNQNLMRGED 178

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
           G+   +          V V+ G +E SN N++ EM  +I L ++F     ++   E+   
Sbjct: 179 GLFRQLSGVNAPADPNVAVESGAIEGSNVNAVDEMVSLIDLQRQFEMQVKMMKTAEEMDQ 238


>gi|317121026|ref|YP_004101029.1| flagellar hook-basal body protein [Thermaerobacter marianensis DSM
           12885]
 gi|315591006|gb|ADU50302.1| flagellar hook-basal body protein [Thermaerobacter marianensis DSM
           12885]
          Length = 289

 Score =  147 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 50/289 (17%), Positives = 96/289 (33%), Gaps = 48/289 (16%)

Query: 1   MQ-TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA----------IK 49
           M   +     A   A  +++   A+N++N +T GF+  +  F+++V A            
Sbjct: 1   MIGRALWTSAAGMAAAARQVDVTANNLANVNTPGFKASRADFADLVYAALAVPASPATAA 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP--RGIILTRDGRFK 107
               Q    V       S   G   STG+  D A++G  +F +  P    ++LTR G F 
Sbjct: 61  AGGVQAGHGVRLAATPRSWRQGPLQSTGSPWDLAIDGAGFFQVVEPGTGEVLLTRGGAFV 120

Query: 108 VTDDGSL--------------------------VSASGKYPVLDMASVPIQIPQKDEIFN 141
           ++                               V+     P+L     P+ +P     + 
Sbjct: 121 LSPLPGGAPGAGPGEDPGQGPGGGPGGAGEALLVTDGAGRPLLRDDGRPLVLPAGARSWV 180

Query: 142 VGEKGEISQ-----KGKVIATMGLYSVDMSQGFVRRENSGISP---NIPPTPLEDLSGVT 193
           V  +GE+       +      + L           R     +P    +   P        
Sbjct: 181 VTPEGEVRAVLAGGREVPAGRLALVVPAAPDALESRGEGLYAPGPGAVAALPPGQGGAGR 240

Query: 194 VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           V++G LE +N +   EM +++   + +      +   ++ M   I  + 
Sbjct: 241 VRQGMLEQANVDLAVEMTRLLAAQRAYQLNARAVLTGDEMMG-LINRLR 288


>gi|325111113|ref|YP_004272181.1| flagellar basal-body rod protein FlgG [Planctomyces brasiliensis
           DSM 5305]
 gi|324971381|gb|ADY62159.1| flagellar basal-body rod protein FlgG [Planctomyces brasiliensis
           DSM 5305]
          Length = 267

 Score =  147 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 42/263 (15%), Positives = 93/263 (35%), Gaps = 24/263 (9%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG------------AIKN 50
            + +   +   A   +L  +A+N++N+ T GF+  + +F ++                  
Sbjct: 4   RTLHSAASGMEASLFQLDVIANNLANSGTTGFKRSRAEFEDLFYEHFKLPGAQPAPQQTP 63

Query: 51  DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR--GIILTRDGRFKV 108
                    A     +    GS   TG  LD A+ GD +F ++ P       TR G F  
Sbjct: 64  TGIAVGLGAAIRATQVDFTEGSLNQTGNSLDIAIMGDGFFQIQDPTGGDPYYTRAGTFTK 123

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNV----GEKGEISQKGKVIATMGLYSVD 164
             +G++V +S +       S+ I     +           +   S        + L    
Sbjct: 124 NSEGTIVMSSAQTGRPLEPSINIPPTAVNISITSNGEVWYQEAGSSTMTQAGQIQLARFV 183

Query: 165 MSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
            ++G ++   +    +        +        T+++GFLE SN   + E+ ++I   + 
Sbjct: 184 NNEGLIQMGENLYRASDASGVATISIPGQDGAGTLRQGFLETSNVEPVRELVELIKTQRN 243

Query: 220 FNSITTLIDENEKSMLEAIRNIA 242
               +  +   ++ + + +  + 
Sbjct: 244 VELNSEAMKAGDQML-QLVNGLR 265


>gi|37679148|ref|NP_933757.1| flagellar basal body rod protein FlgF [Vibrio vulnificus YJ016]
 gi|320157108|ref|YP_004189487.1| flagellar basal-body rod protein FlgF [Vibrio vulnificus MO6-24/O]
 gi|37197890|dbj|BAC93728.1| flagellar basal body rod protein FlgF [Vibrio vulnificus YJ016]
 gi|319932420|gb|ADV87284.1| flagellar basal-body rod protein FlgF [Vibrio vulnificus MO6-24/O]
          Length = 249

 Score =  147 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 59/241 (24%), Positives = 96/241 (39%), Gaps = 11/241 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  + ++      Q L   A+N++N  T GFR    +   +      +      F  
Sbjct: 1   MDRALFLAMSGAKQNMQALQLRANNLANVSTTGFRADLAQARSM--QAYGEGLPTRVFSM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESP-RGIILTRDGRFKVTDDGSLVSASG 119
           + +   +   GS I+TG +LD  +EG+ W  +        LTR+G  KV  +G L +ASG
Sbjct: 59  TERPGHNFAQGSVITTGRDLDITIEGNGWIGVMDKLGKEGLTRNGNLKVDQNGLLSNASG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172
            + VL     PI IP       +G  G IS   +      +  +D             + 
Sbjct: 119 -HLVLGEGGAPITIPLPVSKIEIGRDGTISVLPQGAPAEEMEEIDRIKLVKTNDSALFKD 177

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            N       P  P E    V +  G +E SN N++ EM  +I L ++F     ++   E+
Sbjct: 178 TNGLFRHKEPNQPYEADPTVQIMTGAIEGSNVNAVGEMTALIDLQRQFEMQVKMMSTAEE 237

Query: 233 S 233
            
Sbjct: 238 M 238


>gi|85712255|ref|ZP_01043306.1| Flagella basal body rod protein [Idiomarina baltica OS145]
 gi|85693882|gb|EAQ31829.1| Flagella basal body rod protein [Idiomarina baltica OS145]
          Length = 247

 Score =  147 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 48/241 (19%), Positives = 90/241 (37%), Gaps = 7/241 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     I ++      + +S  A+N++NT+T GF+    +   +      +      F  
Sbjct: 1   MDKMLWIAMSGANENMKAVSVRANNLANTNTTGFKADLEQARSM--QAFGEGLPTRVFSM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119
           +     +   G   +TG  LD A+ G  W A++        TR+G  ++   G L ++SG
Sbjct: 59  TESPGQNFAEGPIRTTGRNLDVAINGQGWIAVQDANGNERYTRNGSLEIDAGGMLRTSSG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS----VDMSQGFVRRENS 175
              + D   V I +P             I  +G       +      V+     V +   
Sbjct: 119 DPVMGDAGPVLIPMPIDSLTIGRNGNISIRPQGAPEDANEIVDRIKLVNPPLNNVEKTTD 178

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
           G             + V ++ G LE SN N++ EM  MI L +++     ++   +++  
Sbjct: 179 GYFALKDGQQALADANVKLEVGALEGSNVNAIGEMTSMIALQRQYEMNVKMMKTADENAQ 238

Query: 236 E 236
            
Sbjct: 239 R 239


>gi|304409977|ref|ZP_07391596.1| flagellar basal-body rod protein FlgF [Shewanella baltica OS183]
 gi|307302310|ref|ZP_07582068.1| flagellar basal-body rod protein FlgF [Shewanella baltica BA175]
 gi|304351386|gb|EFM15785.1| flagellar basal-body rod protein FlgF [Shewanella baltica OS183]
 gi|306914348|gb|EFN44769.1| flagellar basal-body rod protein FlgF [Shewanella baltica BA175]
          Length = 247

 Score =  146 bits (369), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 45/238 (18%), Positives = 90/238 (37%), Gaps = 7/238 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + ++        L+  A+N++N +T GF++   +   +      +      F  
Sbjct: 1   MDKFLYVAMSGAKQNMNELALRANNLANANTDGFKSDMAQARSM--QAFGEGLPTRVFAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASG 119
           +     +   G   +TG +LD A++GD WFA++        TR G       G L +  G
Sbjct: 59  TESPSANFRSGPIKTTGRDLDVAIKGDGWFAVQAQDGSEAYTRSGSLSFDSTGLLHNDRG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
              + D   + + +P +    +      +  +G     +        V+     + R   
Sbjct: 119 NPVMGDAGPIVLPLPIEKVSISQDGIISVRPQGATAEVVEEVGRLKLVNPGNAEMMRGED 178

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           G+   +          V V+ G +E SN N + EM  +I L ++F     ++   E++
Sbjct: 179 GLFRLMSGNIAPADPSVGVESGAVEGSNVNPVDEMVSLIDLQRQFELQVKMMKTAEEN 236


>gi|237653582|ref|YP_002889896.1| flagellar basal-body rod protein FlgF [Thauera sp. MZ1T]
 gi|237624829|gb|ACR01519.1| flagellar basal-body rod protein FlgF [Thauera sp. MZ1T]
          Length = 246

 Score =  146 bits (369), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 61/245 (24%), Positives = 95/245 (38%), Gaps = 5/245 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       +        + + VA N++N D  GFR    K   V   ++ +  +  +F  
Sbjct: 1   MDRLIYTAMTGAKGTMDQQAAVAHNLANVDATGFRAELHKLRAV--EVQTEALRTRAFTV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
                     G    TG   D AL G  W A++ P      TR+G   V+ +G L +  G
Sbjct: 59  DASVANDFTEGPLQFTGRPFDVALAGKGWLAVQMPDGSEAYTRNGSLAVSANGVLQTRDG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKG--EISQKGKVIATMGLYSVDMSQGFVRRENSGI 177
           +  + D   V I    +  I   G     +  Q G V     L  V+  +  + R + G+
Sbjct: 119 RPVLGDGGPVTIPPDNEITIGADGSVSALQPDQPGVVNVVAQLKLVNPPEAQLVRGDDGL 178

Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                  P      V V  G+LE SN N + +M QMI L ++F   T ++   E++   A
Sbjct: 179 FRLQGGAPAPVDPNVRVAGGYLEGSNVNVVDQMVQMISLARQFEMQTRMLSTAEQNDRSA 238

Query: 238 IRNIA 242
            R I 
Sbjct: 239 ARVIG 243


>gi|15895409|ref|NP_348758.1| flagellar basal body rod protein FlgG [Clostridium acetobutylicum
           ATCC 824]
 gi|15025132|gb|AAK80098.1|AE007715_3 Flagellar basal body rod protein [Clostridium acetobutylicum ATCC
           824]
          Length = 258

 Score =  146 bits (369), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 91/260 (35%), Gaps = 22/260 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKND------ 51
           M       ++  +  E +   + +N++NT+TVGF++  +    F +V+    +       
Sbjct: 1   MVRGLYTAISGMVVQEAKQDVITNNLANTNTVGFKSDSLSSQSFEDVLIQNYSKRENGVP 60

Query: 52  ----IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR---GIILTRDG 104
               +                  G+  +T  + DFA++G  +F +           TR+G
Sbjct: 61  ERTLLGTLNLGSRINDTATDFTGGNIQATDIDTDFAIQGRGFFTVRKNNGSDQNYYTRNG 120

Query: 105 RFKVTDDGSLVSASGKYPVLDM--ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162
            F V  DG ++  SG Y +      +    I     I +    G +S  G          
Sbjct: 121 HFHVNMDGYMLDDSGDYIMGTNLATNTTEPIKLGKGIVSCDPYGNVSVDGPAKYKFNFVH 180

Query: 163 VDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222
            +      +  ++                 +V+   LE SN N M  M  M+   + F S
Sbjct: 181 FNDYTKLKKIGDNLFQ----GDNPIQNFNASVENKALEGSNVNVMKGMTDMMTTMRVFES 236

Query: 223 ITTLIDENEKSMLEAIRNIA 242
               +   ++++ +A+  + 
Sbjct: 237 NQKTVQSIDETVGKAVNEVG 256


>gi|87306342|ref|ZP_01088489.1| FlgF [Blastopirellula marina DSM 3645]
 gi|87290521|gb|EAQ82408.1| FlgF [Blastopirellula marina DSM 3645]
          Length = 255

 Score =  146 bits (369), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 56/253 (22%), Positives = 91/253 (35%), Gaps = 14/253 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV---------GAIKND 51
           M     I      A  QR+  +A+N++N DT GF+                         
Sbjct: 1   MPYGLYIAAEGAQAQAQRVEVLANNIANVDTTGFKRDLAVLQARYSQAIEDGKDYPNSGS 60

Query: 52  IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDD 111
           I+     V   ++      G    T    D A+ GD +F +E      LTR G F  T D
Sbjct: 61  INDVGGGVYVSEKVTDYSRGVLKGTNVPTDLAIAGDGFFQVEIDGETYLTRAGNFTFTAD 120

Query: 112 GSLVSASGKYP---VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
           G+LV+ +G        +   V  +           E G  +  G V+  + +        
Sbjct: 121 GALVTPAGNAVLDAEGEPVQVDPEALANHVGNYFDENGFCTVGGDVV-PLAMVKPKSVSD 179

Query: 169 FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228
             +  ++   P  P  PL      T + G+LE S  NS+ EM  MI   + + +   LI 
Sbjct: 180 LAKYGDNAFFPLAPVEPLALEERQT-RAGYLEGSGVNSITEMMTMIEAQRAYEANVNLIK 238

Query: 229 ENEKSMLEAIRNI 241
            +++ +   I  +
Sbjct: 239 NHDEMLGNLISRV 251


>gi|241766921|ref|ZP_04764727.1| flagellar basal-body rod protein FlgF [Acidovorax delafieldii 2AN]
 gi|241362625|gb|EER58473.1| flagellar basal-body rod protein FlgF [Acidovorax delafieldii 2AN]
          Length = 246

 Score =  146 bits (369), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 53/244 (21%), Positives = 94/244 (38%), Gaps = 5/244 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       +    A  QR + +A+N++N  T GFR     F  V   ++ D  +   F  
Sbjct: 1   MDRIIYTSMTGANAAAQRQAVLANNLANASTQGFRAEMSTFRSV--PLQGDGSKTRVFAL 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119
                  +  G    TG  LD    G+AWF ++        TR G F+V+  G+L++++G
Sbjct: 59  EATSGHLQTPGPVQRTGRALDAMAMGNAWFGVQGLDGLEAYTRAGGFEVSSAGTLLTSTG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS--QGFVRRENSGI 177
              + D  +     P  +              G+   T+G   +        ++R + G+
Sbjct: 119 LTVLSDAGAPIDVPPGAEVSLGADGTISAKTAGQPATTIGRLKLATPTADNPLKRGDDGL 178

Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                  PL +     +  G +E SN N++  M  MI   ++F     L+   E +   A
Sbjct: 179 FRTTSGDPLPNDPTARMLAGAIEGSNVNAVESMVGMIAAARQFEQQMKLLQTAETNDKSA 238

Query: 238 IRNI 241
            + +
Sbjct: 239 SQLL 242


>gi|121607560|ref|YP_995367.1| flagellar basal-body rod protein FlgF [Verminephrobacter eiseniae
           EF01-2]
 gi|121552200|gb|ABM56349.1| flagellar basal-body rod protein FlgF [Verminephrobacter eiseniae
           EF01-2]
          Length = 246

 Score =  146 bits (369), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 55/245 (22%), Positives = 89/245 (36%), Gaps = 5/245 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       +    A   R + +A+N++N  T GFR     F  V   ++ D  +   F  
Sbjct: 1   MDHIIYTTMTGAGAAAYRQAVLANNLANISTGGFRAQLSTFRSV--PLQGDGAKTRVFAL 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
                     G    TG  LD    G AWFA++ P      TR G F+++  G L++  G
Sbjct: 59  EATSGYDDSAGPVQHTGRNLDALAAGRAWFAVQGPDGTEAYTRAGSFELSPTGQLLTPGG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS--QGFVRRENSGI 177
              + D  +     P  D              G+   T+G   +     +  ++R   G+
Sbjct: 119 LPVLSDAGTPIDMPPGADITLGADGSISAKVAGQPAQTVGRLKLATPGAEDPLQRGGDGL 178

Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                  PL   +   +  G LE SN N +  M  MI   ++F     L+   + +   A
Sbjct: 179 FRTASGEPLPSDADARMLAGALEGSNVNPVECMVGMIAAARQFEQQMQLLQTAQTNDKSA 238

Query: 238 IRNIA 242
            R + 
Sbjct: 239 SRLLG 243


>gi|23100412|ref|NP_693879.1| flagellar basal-body rod protein [Oceanobacillus iheyensis HTE831]
 gi|22778645|dbj|BAC14913.1| flagellar basal-body rod protein [Oceanobacillus iheyensis HTE831]
          Length = 269

 Score =  146 bits (369), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 48/272 (17%), Positives = 104/272 (38%), Gaps = 36/272 (13%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDIDQKI- 56
           M        +  +  +++  ++++N++N +T G++  +     F E++        Q   
Sbjct: 1   MLRGLYTAASGMITQQRQQESLSNNIANANTPGYKADQTTIRAFPELLLQQTGSSSQIPT 60

Query: 57  -----------------SFVASGKEYLSKEVGSFISTGTELDFAL--------EGDAWFA 91
                            + V   +   +   G    TG   D A+         G  +F+
Sbjct: 61  SQGGMNFPISQTIGPINTGVYVQETVPNFAQGDVQETGLSTDVAIIQGQVPDENGFLFFS 120

Query: 92  LESPR-GIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ 150
           +++      LTR+G F V  +G LV+  G Y + +  +      Q + +  V       Q
Sbjct: 121 VQNENGEERLTRNGNFTVDGEGFLVTNQGNYVLDEAGNPI----QTNGLDYVVTPEGFVQ 176

Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEM 210
                  +G+  V+ S   V+  N   +      P    +  ++++G LE SN N+M  M
Sbjct: 177 TADGTFPLGIRYVEDSNQLVKEGNDLFAGESIDVP--AAATFSLQQGALEQSNVNTMQTM 234

Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
             M++  + F +   ++   ++S+ + +  I 
Sbjct: 235 TDMMNAYRLFETNQRVLRAYDESLGKTVNEIG 266


>gi|260772275|ref|ZP_05881191.1| flagellar basal-body rod protein FlgF [Vibrio metschnikovii CIP
           69.14]
 gi|260611414|gb|EEX36617.1| flagellar basal-body rod protein FlgF [Vibrio metschnikovii CIP
           69.14]
          Length = 249

 Score =  146 bits (369), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 55/241 (22%), Positives = 99/241 (41%), Gaps = 11/241 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  + ++      Q +   A+N++N  T GFR    +   +      +      F  
Sbjct: 1   MDRALFLAMSGAKQNMQAMQLRANNLANVSTTGFRADLEQARSM--QAYGEGLPSRVFSM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASG 119
           + +     + GS I+TG ELD  ++GD W ++ +      LTR G  ++  +G L++ +G
Sbjct: 59  TERPGHRFDQGSVITTGRELDITIQGDGWISVLDKTGNEGLTRSGNLRIDQNGLLLNGNG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172
            + VL     PI +P       +G  G IS + +      +  VD        ++   + 
Sbjct: 119 -HLVLGELGAPITLPIPLNKVEIGNDGTISVRPQGAPADAMEIVDRIKLVKPDNRSLFKD 177

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            N       P       + V V  G LE SN N++ EM  +I L ++F     ++   E+
Sbjct: 178 INGLFRAKDPNAEYVADATVKVLTGALEGSNVNAVGEMTNLIDLQRQFEMQVKMMSTAEE 237

Query: 233 S 233
            
Sbjct: 238 M 238


>gi|254508430|ref|ZP_05120550.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus 16]
 gi|219548640|gb|EED25645.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus 16]
          Length = 249

 Score =  146 bits (368), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 59/241 (24%), Positives = 100/241 (41%), Gaps = 11/241 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  + ++      Q L   A+N++N  T GFR    +   +      +      F  
Sbjct: 1   MDRALYLAMSGAKQNMQALQLRANNLANVSTTGFRADLAQARSM--QAYGEGLPTRVFSM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASG 119
           + +   + + GS I+TG +LD  +EG+ W ++ +      LTRDG  K+  +G LVS +G
Sbjct: 59  TERPGHNFQQGSVITTGRDLDVTIEGNGWISVLDKTGKEGLTRDGNLKIDVNGLLVSGNG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172
               L     PI +P       +G  G IS   +      +  VD        +Q   + 
Sbjct: 119 NLV-LGETGAPITLPIPLSKVEIGTDGTISVVPQGAPADAIEVVDRIKLTNTDNQSLFKD 177

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            N       P    E  +GV +  G +E SN N++ EM  +I L ++F     ++   E+
Sbjct: 178 VNGLFRAKDPNAAYEADAGVKLLTGAIEGSNVNAIGEMTSLIDLQRQFEMQVKMMSTAEE 237

Query: 233 S 233
            
Sbjct: 238 M 238


>gi|170742325|ref|YP_001770980.1| flagellar basal-body rod protein FlgG [Methylobacterium sp. 4-46]
 gi|168196599|gb|ACA18546.1| flagellar basal-body rod protein FlgG [Methylobacterium sp. 4-46]
          Length = 263

 Score =  146 bits (368), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 36/259 (13%), Positives = 84/259 (32%), Gaps = 21/259 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55
             +         A E  +  +++N++N  T G++  +  F +++                
Sbjct: 1   MRALYAAATGMAAQELNVQVISNNIANLRTTGYKRQQAHFQDLLYQNLRRAGTATSDQGN 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    S V +         G+  ST    D A+ G+  F +  P      TRDG F
Sbjct: 61  QLPAGLALGSGVKTTSTARVMSQGTLSSTEKTYDVAIRGEGLFQITMPDGRTAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165
            +   G +VS  G      +               + +         + +  + L     
Sbjct: 121 DLDAQGQIVSRDGYLLNPAITVPNNATAVTISASGLVQATLPGQTAPQNLGQIQLARFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++         P    +  T     +++ +LE++N N++ E+  +I   + +
Sbjct: 181 KVGLESIGDNLFIETQASGPAIQGNPGTEGFGSLQQSYLEEANVNAVTEISSLIAAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIR 239
              + ++   ++ +    +
Sbjct: 241 EMNSKVVTAADQMLSTTSQ 259


>gi|83589650|ref|YP_429659.1| hypothetical protein Moth_0798 [Moorella thermoacetica ATCC 39073]
 gi|83572564|gb|ABC19116.1| conserved hypothetical protein [Moorella thermoacetica ATCC 39073]
          Length = 280

 Score =  146 bits (368), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 57/279 (20%), Positives = 114/279 (40%), Gaps = 38/279 (13%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG-------------A 47
           M  +   G +   A + ++ ++A++++N +T G++ ++V FS++V               
Sbjct: 2   MIGALWRGASGMRAQQVQVDSLANDIANVNTTGYKQVRVGFSDLVYRPVMEAGMPVEQPQ 61

Query: 48  IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRF 106
                    + V           G+ + TG  L+ A++G+ +FA+ +  G    TRDG F
Sbjct: 62  APGSTVSLGTGVKVASIVKDFSQGALVQTGEPLNLAIQGEGFFAVVNGAGERFLTRDGNF 121

Query: 107 KVTDDGSLVSASGKY---PVLDMASVPIQIPQKDEIFNVGEKGEISQ----KGKVIATMG 159
               DG++V+  G Y   P  +   VP+ +P + E  NV   G I+     + + +  + 
Sbjct: 122 HRDADGNVVNDGGYYLAIPAGNNQDVPLNLPPEAENINVAADGTITATVNGQVQPLGQIY 181

Query: 160 LYSVDMSQGFVRRENS----------------GISPNIPPTPLEDLSGVTVKRGFLEDSN 203
           LY+V    G     ++                G + N   T        T++ G+LE +N
Sbjct: 182 LYTVSNPAGLEAVGDNLYRLTPACGQLFYGAPGTAGNSETTGTPGPVLGTLRSGYLEAAN 241

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            +    M +M+   + +   +  I   ++ M     N+ 
Sbjct: 242 VDLAATMTRMVVAQRAYELNSRTIRVADE-MWSLANNLR 279


>gi|162147479|ref|YP_001601940.1| flagellar basal-body rod protein flgF [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|161786056|emb|CAP55638.1| putative flagellar basal-body rod protein flgF [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 254

 Score =  146 bits (368), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 65/244 (26%), Positives = 117/244 (47%), Gaps = 8/244 (3%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----DIDQKIS 57
           + +  I L+    L + L   A+N++N +T GF+  K  FS+ +   K+      D++  
Sbjct: 9   ENTTYIALSRVDVLSRALEVTANNLANANTDGFKASKELFSDYLVQQKDVHGLPGDKEEV 68

Query: 58  FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSA 117
           +      Y  +  G+   TG   DFA+ G+ +FA+ + +G+ LTR+G F    DG++V  
Sbjct: 69  YTQDRSTYQDRLQGALRQTGNLTDFAINGEGYFAVRTTQGVRLTRNGEFNRRADGTIVDG 128

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177
           SG  P++D     + IP +D   +V   G +S +   +AT+ L +VD     V      +
Sbjct: 129 SGN-PLIDRNGNNVVIPPRDHTLSVASDGTMSTETGRVATLDLVTVDNPNTLVPEGGYLL 187

Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
            P     P  +++   +++G LE SN N++ E  +M+ + + ++    LI         A
Sbjct: 188 RPTT---PTRNVANKEIRQGMLESSNVNAVSETTEMVEIQRDYDLTFQLIQTESTRQSNA 244

Query: 238 IRNI 241
           I  I
Sbjct: 245 IDKI 248


>gi|291518271|emb|CBK73492.1| fagellar hook-basal body proteins [Butyrivibrio fibrisolvens 16/4]
          Length = 267

 Score =  146 bits (368), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 54/267 (20%), Positives = 101/267 (37%), Gaps = 27/267 (10%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV-------------VGA 47
           M           +  ++R+  + +N++N+ T G++   +                     
Sbjct: 1   MVKGLYTAYTGMVNEQKRMDVMTNNLANSATTGYKKEAMIAQAFDERLAIKIKDTSSWHN 60

Query: 48  IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-----PRGIILTR 102
               I         G+ Y + + G+F  T  + D AL G  +FA+E         I  TR
Sbjct: 61  APEGIGYISLGAKVGETYTNWDQGAFQITDKDSDVALAGRGFFAIEFTNKAGETSIKYTR 120

Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE-------KGEISQKGKVI 155
           DG F V  DG L +  G Y +    ++  Q  + + +             G I Q G+ +
Sbjct: 121 DGAFVVDRDGYLRTVDGDYVLTQEGAMNSQGGEDNYVQIDPNLKYVIATDGSIRQNGEEV 180

Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIH 215
            T+G+  +D      +   +    ++ P      S   V++G LE SN N + EM  MI 
Sbjct: 181 TTIGVIDIDNYDYINKYGENLY--DLIPGGNIVESEAVVQQGMLEASNVNVIDEMVSMIT 238

Query: 216 LTQKFNSITTLIDENEKSMLEAIRNIA 242
           + + + +   +I   + ++ +    I 
Sbjct: 239 IARAYEAGQKMIQAEDSTLEKTANQIG 265


>gi|134095095|ref|YP_001100170.1| basal-body rod protein [Herminiimonas arsenicoxydans]
          Length = 242

 Score =  146 bits (368), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 39/241 (16%), Positives = 83/241 (34%), Gaps = 20/241 (8%)

Query: 19  LSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------------QKISFVASGKEY 65
           +  +++N++N  T GF+  +  F +++                     Q  + V      
Sbjct: 1   MDVISNNLANVSTTGFKRSRAVFEDLLYQTIRQPGAASSQQTELPSGLQLGTGVRPVATE 60

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYPVL 124
                G+   T    + A+EGD +F +  P      TRDG F+  + G +V++SG     
Sbjct: 61  RIHTQGNLQLTSNAKNLAIEGDGFFQVLMPDGTTAYTRDGSFQTDNQGQMVTSSGFPIQP 120

Query: 125 DMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183
            +                V      +     I  + L +     G + R  +        
Sbjct: 121 AITIPENATSITISRDGIVSVTVSGTTAATEIGALQLATFINPAGLMSRGENLYVETTAS 180

Query: 184 TPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
                 +  +     +K+ ++E SN N + E+  MI   + +   +  I  +++ +    
Sbjct: 181 GTANTNTPGSNGAGLLKQNYVETSNVNVVEELVSMIQTQRAYEINSKAITTSDQMLQRLT 240

Query: 239 R 239
           +
Sbjct: 241 Q 241


>gi|117612105|gb|ABK47559.1| flagellar basal-body rod protein FlgF [Shewanella sp. ANA-3]
          Length = 252

 Score =  146 bits (368), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 47/237 (19%), Positives = 89/237 (37%), Gaps = 7/237 (2%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
                I ++        L+  A+N++N +T GF++   +   +      +      F   
Sbjct: 7   DKFLYISMSGAKQNMNELALRANNLANANTDGFKSDMAQARSM--QAFGEGLPTRVFAMV 64

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASGK 120
                +   G   STG +LD A++GD WFA++        TR G       G L +  G 
Sbjct: 65  ETPSANFRSGPIKSTGRDLDVAIKGDGWFAVQAQDGSEAYTRSGSLSFDSTGLLHNDRGN 124

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENSG 176
             + D   + + +P +    +      +  +G     +        V+     + R   G
Sbjct: 125 PVMGDAGPIVLPLPIEKVTISQDGIISVRPQGATTEVVEEVGRLKLVNPGNAQMMRGEDG 184

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           +   +   P      V V+ G +E SN N + EM  +I L ++F     ++   E++
Sbjct: 185 LFRLVSGDPAPADPSVFVESGAVEGSNVNPVDEMVSLIDLQRQFELQVKMMKTAEEN 241


>gi|299131784|ref|ZP_07024979.1| flagellar basal-body rod protein FlgF [Afipia sp. 1NLS2]
 gi|298591921|gb|EFI52121.1| flagellar basal-body rod protein FlgF [Afipia sp. 1NLS2]
          Length = 256

 Score =  146 bits (368), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 66/253 (26%), Positives = 121/253 (47%), Gaps = 12/253 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA------IKNDIDQ 54
           M+ +  I L+ Q+ LE++L  VA+N++N  T G+++    F E + +           D+
Sbjct: 1   MENTTLIALSRQMTLERQLDVVANNVANVGTNGYKSDSSLFEEYLRSGAHEDNFAPGSDR 60

Query: 55  KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSL 114
           ++SFV           G   +T + LD A+ G  +F +++P G   TRDGRF++   G L
Sbjct: 61  RVSFVQDRATVRDFSQGPLENTKSPLDVAISGKGFFTVQTPGGERYTRDGRFQINSQGQL 120

Query: 115 VSASGKYPVLDM-----ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169
           V++SG   +              I   D+      +G I+Q   +   + L S    Q  
Sbjct: 121 VNSSGYPVLGTNGVITFQPTDHDIKITDDGTITVLEGTITQTDSLRGKLKLTSFANRQQL 180

Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
            +  ++  +     T  +  +  TVK GF+E SN N++ EM +M+ +T+ + +I+ L+ +
Sbjct: 181 QKEGSNLFAAPANVTG-QADTVSTVKEGFIERSNVNAIAEMSRMLEITRTYQNISNLMQQ 239

Query: 230 NEKSMLEAIRNIA 242
                  AI+++A
Sbjct: 240 QADLRKNAIQSLA 252


>gi|262396033|ref|YP_003287886.1| flagellar basal-body rod protein FlgG [Vibrio sp. Ex25]
 gi|262339627|gb|ACY53421.1| flagellar basal-body rod protein FlgG [Vibrio sp. Ex25]
          Length = 243

 Score =  146 bits (368), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 44/237 (18%), Positives = 87/237 (36%), Gaps = 20/237 (8%)

Query: 19  LSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------------QKISFVASGKEY 65
           ++ +++N++N +TVGF+  +V F ++  +I+                 Q  S V      
Sbjct: 1   MTAISNNLANVNTVGFKRDRVVFEDLFYSIQRQPGAQVDQVNEVPSGIQLGSGVRVVGTQ 60

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASGKYPVL 124
                G+  +T  ELD A+ G  +F +E+    I+ TR+G+F V  +G +V++ G     
Sbjct: 61  KVFTQGNTQNTTQELDLAVMGQGFFQIENSDGQIMYTRNGQFHVNSEGLMVNSQGLPLEP 120

Query: 125 DMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183
            +                V          + +  + L       G      +        
Sbjct: 121 QIQIPDNASSFSVGVDGTVTTTTADDPTPQQLGQITLAKFINPAGLEAVGGNLFRETEAS 180

Query: 184 TPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
            P ++          +K+G LE SN   + EM  MI   + +     ++   +  + 
Sbjct: 181 GPADELIAGEDGAGLIKQGALEGSNVQVVEEMVDMITTQRAYEMNAKVVSAADDMLK 237


>gi|113884291|gb|ABI38343.1| flagellar basal-body rod protein FlgF [Shewanella sp. MR-4]
 gi|113888281|gb|ABI42332.1| flagellar basal-body rod protein FlgF [Shewanella sp. MR-7]
          Length = 252

 Score =  146 bits (367), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 46/237 (19%), Positives = 89/237 (37%), Gaps = 7/237 (2%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
                I ++        L+  A+N++N +T GF++   +   +      +      F   
Sbjct: 7   DKFLYISMSGAKQNMNELALRANNLANANTDGFKSDMAQARSM--QAFGEGLPSRVFAMV 64

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASGK 120
                +   G   +TG +LD A++GD WFA++        TR G       G L +  G 
Sbjct: 65  ETPSANFRAGPIKTTGRDLDVAIKGDGWFAVQAKDGSEAYTRSGSLSFDSTGLLHNDRGN 124

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENSG 176
             + D   + + +P +    +      +  +G     +        V+     + R   G
Sbjct: 125 PVMGDAGPIVLPLPIEKVTISQDGIISVRPQGATTEVIEEVGRLKLVNPGNAQMMRGEDG 184

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           +   +   P      V V+ G +E SN N + EM  +I L ++F     ++   E++
Sbjct: 185 LFRLVSGDPAPADPNVFVESGAVEGSNVNPVDEMVSLIDLQRQFELQVKMMKTAEEN 241


>gi|262404539|ref|ZP_06081094.1| flagellar basal-body rod protein FlgF [Vibrio sp. RC586]
 gi|262349571|gb|EEY98709.1| flagellar basal-body rod protein FlgF [Vibrio sp. RC586]
          Length = 249

 Score =  146 bits (367), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 56/241 (23%), Positives = 102/241 (42%), Gaps = 11/241 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  + ++      Q +   A+N++N  T GFR    +   +      +      F  
Sbjct: 1   MDRALFLAMSGAKQNMQAMQLRANNLANVSTTGFRADLAQARSM--QAYGEGLPTRVFSM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASG 119
           + +   +   GS I+TG +LD  ++G+ W ++ +      LTR+G  ++ + G L++ +G
Sbjct: 59  TERPGNNFAQGSVITTGRDLDITVQGEGWISVLDKTGKEGLTRNGNLRIDETGLLLNGNG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172
            +PVL     PI +P       +G  G IS + +      +  VD        +Q   + 
Sbjct: 119 -HPVLGETGGPITLPVPLAKVEIGGDGTISVRPQGAPADAMEVVDRIKLVRPGNQALFKD 177

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            N       P    E  + V V  G LE SN N++ EM  +I L ++F     ++   E+
Sbjct: 178 VNGLFRATDPNMQFEADANVKVLTGALEGSNVNAIGEMTSLIDLQRQFEMQVKMMSTAEE 237

Query: 233 S 233
            
Sbjct: 238 M 238


>gi|89895707|ref|YP_519194.1| hypothetical protein DSY2961 [Desulfitobacterium hafniense Y51]
 gi|89335155|dbj|BAE84750.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 251

 Score =  146 bits (367), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 55/255 (21%), Positives = 106/255 (41%), Gaps = 20/255 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKND------ 51
           M      G A  LA + +   +ADN++N  T G++  +     F E++    +       
Sbjct: 1   MIKGLYTGAAGMLAAQTQSEIIADNVANIRTPGYKGEESSNKAFPEMLMMRTSTENEIPG 60

Query: 52  ---IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA-WFALESPRGIILTRDGRFK 107
              I    + V   +       G   +T    D AL  +  +  +++P G   TR+G+ +
Sbjct: 61  NTLIGGIGTGVVVDQITRMNVRGVLQTTDIPTDLALTAEEVFLVVDTPNGERYTRNGQLQ 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           +  +G L +A G   + +       I    + F V  +G I+ +G  +  + L  V  + 
Sbjct: 121 LNSEGMLQTADGYPVLGEE----GPIGPLSKNFQVDAQGGITDQGVTMDRLRLVQVP-AV 175

Query: 168 GFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
           G +R   S  + N P    +      V +G LE SN N   +M +MI + + + +   +I
Sbjct: 176 GLLREGQSLYASNQPV--QDFAGNEAVLQGTLEGSNVNLPGQMVKMITVMRAYEANQKVI 233

Query: 228 DENEKSMLEAIRNIA 242
             ++ ++ +A+  I 
Sbjct: 234 QTHDATLEKAVNEIG 248


>gi|170747256|ref|YP_001753516.1| flagellar basal-body rod protein FlgG [Methylobacterium
           radiotolerans JCM 2831]
 gi|170653778|gb|ACB22833.1| flagellar basal-body rod protein FlgG [Methylobacterium
           radiotolerans JCM 2831]
          Length = 263

 Score =  146 bits (367), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 37/263 (14%), Positives = 84/263 (31%), Gaps = 21/263 (7%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             +         A E  +  +++N++N  T G++  +V F +++                
Sbjct: 1   MRALYSAATGMAAQELNVQVISNNIANLRTTGYKRQQVHFQDLLYQNMRRAGASTSQQNT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                    S V +         G+  ST  + D A+ GD +F +  P      +RDG F
Sbjct: 61  QLPAGLSLGSGVKTTSTARVMSQGTLSSTEKDYDVAIRGDGFFRVTLPDGRTAYSRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFN-VGEKGEISQKGKVIATMGLYSVDM 165
            ++  G LV+  G      +                V          + +    L     
Sbjct: 121 DLSAQGQLVTRDGYLLDPAITVPQNATSVTISATGAVQANIPGQTAPQALGQFQLSRFVN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             G     ++                       +++ +LE++N N++ E+  +I   + +
Sbjct: 181 KVGLESIGDNLFVETAASGQAISGLPGADGFGNLQQSYLEEANVNAVTEISSLIAAQRAY 240

Query: 221 NSITTLIDENEKSMLEAIRNIAS 243
              + ++   ++ +    +   S
Sbjct: 241 EMNSKVVTAADQMLSTTTQMFRS 263


>gi|119714998|ref|YP_921963.1| hypothetical protein Noca_0751 [Nocardioides sp. JS614]
 gi|119535659|gb|ABL80276.1| protein of unknown function DUF1078 domain protein [Nocardioides
           sp. JS614]
          Length = 282

 Score =  146 bits (367), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 44/279 (15%), Positives = 88/279 (31%), Gaps = 40/279 (14%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++     +  L    +N++N +T+GF++    F + +  +            
Sbjct: 1   MLRSLFAGISGLRVNQTMLDVTGNNIANANTIGFKSSSTVFQDTLSQMLTSGSAAGGGLG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                Q    V       +   G+  +TG   D  + GD  F +        TR G F  
Sbjct: 61  GTNPIQVGLGVQVAATNTNLNQGANQTTGRPTDLMINGDGMFVVMRGNVATYTRAGAFSW 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG---------------- 152
            + G+LVS  G             +        V  +   +                   
Sbjct: 121 DNSGTLVSPGGGRVQGYTTFDAAGVHTGGLTDIVLPEDNGATPPLALSSYELGRDGKLTA 180

Query: 153 -------KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLE 200
                   V+A + L + +   G  R   +  +        E     + S   +  G +E
Sbjct: 181 TFEDGSKLVVAQVALANFNNPMGLARAGETSFTTTANSGVAELGVSGEGSRGALSPGSVE 240

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            SN +   E   +I   + F + + +I  +++ + + + 
Sbjct: 241 MSNVDLAAEFTNLILAQRGFQASSRVITTSDQVLEDLVN 279


>gi|303328382|ref|ZP_07358820.1| flagellar basal-body rod protein FlgG [Desulfovibrio sp. 3_1_syn3]
 gi|302861712|gb|EFL84648.1| flagellar basal-body rod protein FlgG [Desulfovibrio sp. 3_1_syn3]
          Length = 264

 Score =  146 bits (367), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 58/262 (22%), Positives = 113/262 (43%), Gaps = 22/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-------- 52
           MQ +   GL   L  E R++ +A+N++N +T G++   + F + + +  +D         
Sbjct: 1   MQDALFSGLFGALTTEHRMNFIANNLANVNTHGYKRDTLAFKDTMASYAHDEIREPLMNL 60

Query: 53  --------DQKISFVASGKEYLSKEVGSFISTGTELDFALEG-DAWFALESPRGIILTRD 103
                    + ++        +    GS   TG  LD A+ G +A+F + +P G  LTR+
Sbjct: 61  RSAPLFPEPKNMARPRVAVSKIDFSQGSMQFTGDPLDVAINGENAFFRVTTPNGDYLTRN 120

Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
           G F ++ DG++++  G    L      + IP       +G  G++   G V+  + L +V
Sbjct: 121 GHFLLSGDGTVMTPQGY--PLQGTGGNVVIPAGTRNVLIGGDGQVIADGAVVNQIALINV 178

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSG---VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
           D  Q   +  ++   P       E  +      +++GF E +N   + EM  MI + ++F
Sbjct: 179 DDPQNLEKLGHNLFRPREKVAVAEGDAYLAGARLEQGFAEAANVQVVTEMVNMIEVQRQF 238

Query: 221 NSITTLIDENEKSMLEAIRNIA 242
            +   ++  ++     A   I 
Sbjct: 239 EAYQKVMQSSDSLDRAANEKIG 260


>gi|323697471|ref|ZP_08109383.1| fagellar hook-basal body protein [Desulfovibrio sp. ND132]
 gi|323457403|gb|EGB13268.1| fagellar hook-basal body protein [Desulfovibrio desulfuricans
           ND132]
          Length = 258

 Score =  146 bits (367), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 55/258 (21%), Positives = 100/258 (38%), Gaps = 20/258 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-------- 52
           M+ S    +   L+ E R+S++A+N++N +T  F+  K+ F +      +D         
Sbjct: 1   MRDSTQSAIFGALSNELRMSSIANNLANVNTSAFKKDKLAFHDTFIRFAHDYLVDAKTYI 60

Query: 53  --------DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDG 104
                      ++      +      GS   TG +LDFAL G  +F+++    ++ TR G
Sbjct: 61  RGEDMFPEGHIMAKARLSAQQADLSQGSMERTGNQLDFALSGPGFFSVQGDTAMLYTRAG 120

Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
            F    DG L +  G   +         I  +     V ++G I   G+   +  +   D
Sbjct: 121 NFVTDGDGMLKTVDGYPVM---VGGGPLIIPQGGRIQVDDEGNIQVNGEPAGSFDVVDFD 177

Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224
             +   R  ++          +     V+V +GF+E SN   + EM  MI   + F   T
Sbjct: 178 SPELLERVGSNNYIMPTGGAQIPP-QDVSVAQGFIEKSNVEVVTEMVSMIETQRAFTMYT 236

Query: 225 TLIDENEKSMLEAIRNIA 242
            +I  +     + I  + 
Sbjct: 237 KMIQGDSDLDSKLINQVG 254


>gi|255262463|ref|ZP_05341805.1| flagellar basal-body rod protein FlgF [Thalassiobium sp. R2A62]
 gi|255104798|gb|EET47472.1| flagellar basal-body rod protein FlgF [Thalassiobium sp. R2A62]
          Length = 238

 Score =  146 bits (367), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 62/241 (25%), Positives = 116/241 (48%), Gaps = 5/241 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M+ S    L  Q  L + +  +A+N++N  T G+R   + FSE V A+  D        A
Sbjct: 1   MENSTYATLTRQSGLMKEMRVIANNIANAATSGYRQEGITFSEYVAAVDQDHSSISMATA 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           + +E    + G   + G   D A+EG+ +F +++P G  LTR G F    +G LV+A G 
Sbjct: 61  NVRETSILQGGLTKTGG-TFDLAIEGEGYFLVQTPDGDRLTRAGAFTPNSNGDLVTADGY 119

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
            PVLD    P+ IP   +   +   G IS  G  I  +G+   +  +  +R++    +  
Sbjct: 120 -PVLDSGGAPVFIPTGADSIGIAADGTISAGGTPIGQVGIVQPNDPKELLRQDGVMFNAP 178

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
                 +      + +GFLEDSN + + ++ +MI + + +    + +D+ ++ +   +++
Sbjct: 179 SG---FDAAPDARLVQGFLEDSNVDPILQISRMIEVQRAYELGQSFLDKEDERIRNVLQS 235

Query: 241 I 241
           +
Sbjct: 236 M 236


>gi|28897554|ref|NP_797159.1| flagellar basal body rod protein FlgF [Vibrio parahaemolyticus RIMD
           2210633]
 gi|153839688|ref|ZP_01992355.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus
           AQ3810]
 gi|260364612|ref|ZP_05777214.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus
           K5030]
 gi|260878283|ref|ZP_05890638.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus
           AN-5034]
 gi|260898113|ref|ZP_05906609.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus
           Peru-466]
 gi|260901955|ref|ZP_05910350.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus
           AQ4037]
 gi|5361009|gb|AAD42916.1|U12817_10 polar flagellar FlgF homolog [Vibrio parahaemolyticus]
 gi|28805766|dbj|BAC59043.1| polar flagellar FlgF [Vibrio parahaemolyticus RIMD 2210633]
 gi|149746798|gb|EDM57786.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus
           AQ3810]
 gi|308086109|gb|EFO35804.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus
           Peru-466]
 gi|308090198|gb|EFO39893.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus
           AN-5034]
 gi|308106789|gb|EFO44329.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus
           AQ4037]
 gi|308115108|gb|EFO52648.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus
           K5030]
 gi|328473452|gb|EGF44300.1| flagellar basal body rod protein FlgF [Vibrio parahaemolyticus
           10329]
          Length = 249

 Score =  146 bits (367), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 59/241 (24%), Positives = 98/241 (40%), Gaps = 11/241 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  + ++      Q L   A+N++N  T GFR    +   +      D      F  
Sbjct: 1   MDRALFLAMSGAKQNMQALQLRANNLANVSTTGFRADLAQARSM--QAYGDGLPSRVFSM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASG 119
           + +   +   GS I+TG +LD  +EG  W ++ +      LTR+G  K+  +G L +ASG
Sbjct: 59  TERPGHNFAQGSVITTGRDLDITVEGSGWISVLDHTGKEGLTRNGNLKIDQNGMLTNASG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172
               L     PI +P       +G  G IS   +      L  VD         Q   + 
Sbjct: 119 HAV-LGENDAPITLPIPLSKIEIGRDGTISVLPQGAPAEELQIVDRIKLVKTDDQSLFKD 177

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            N       P  P E    ++++ G +E SN N++ EM  +I L ++F     ++   E+
Sbjct: 178 TNGLFRHKTPNQPYEADGTISIQTGAIEGSNVNAVGEMTALIDLQRQFEMQVKMMSTAEE 237

Query: 233 S 233
            
Sbjct: 238 M 238


>gi|114567879|ref|YP_755033.1| flagellar basal-body rod protein (flgG-2) [Syntrophomonas wolfei
           subsp. wolfei str. Goettingen]
 gi|114338814|gb|ABI69662.1| flagellar basal-body rod protein (flgG-2) [Syntrophomonas wolfei
           subsp. wolfei str. Goettingen]
          Length = 246

 Score =  146 bits (367), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 51/251 (20%), Positives = 108/251 (43%), Gaps = 26/251 (10%)

Query: 12  QLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKND----------------I 52
            +    R   VA+N++N +T GF+        F +++ +   +                I
Sbjct: 1   MMLQMARQDVVANNLANVNTSGFKKNTAVAKAFPDMLISRLGECKEDKQGQLKVQSPVVI 60

Query: 53  DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDG 112
            +  +  +    Y   +  +   T +  D A+ G  +F +++P G   TR G FK+  +G
Sbjct: 61  GRLGTGASISGIYTDFDNNNLKKTDSPCDLAITGAGYFVVQTPEGQRFTRCGEFKINSEG 120

Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172
            L + SG   +    S        +  F + E+G I+  G+ I  + + + +  Q   R 
Sbjct: 121 ILTTNSGYPVLDSNDSPIT----IEGEFLIDEQGNINVDGENITRLKIVNFNDLQILERL 176

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            ++ ++    P  +E      + +G++E SN N++ EM  +I + + + S+  ++   ++
Sbjct: 177 GDNLLNSPEEPYVMERPE---MLQGYIEQSNVNAVKEMVTLISVVRAYESLQKMVQAEDE 233

Query: 233 SMLEAIRNIAS 243
            M +AI  + S
Sbjct: 234 IMGQAIDKVGS 244


>gi|296122946|ref|YP_003630724.1| hypothetical protein Plim_2702 [Planctomyces limnophilus DSM 3776]
 gi|296015286|gb|ADG68525.1| protein of unknown function DUF1078 domain protein [Planctomyces
           limnophilus DSM 3776]
          Length = 256

 Score =  146 bits (367), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 61/253 (24%), Positives = 102/253 (40%), Gaps = 12/253 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV---------GAIKND 51
           M     +      +   R   +A+N++N  T  F+     F                 + 
Sbjct: 1   MLYGLYLSAQGAESQAMRQGVLANNLANVGTNAFKPDIAVFRSYFPYDVAHQEPQRAPDT 60

Query: 52  IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDD 111
           ID +   VA          GS   TG   D AL GD ++ L+     +LTRDG F++  D
Sbjct: 61  IDLETGGVALEGTITDFSQGSLKPTGKSTDAALLGDGFYQLKMGNETLLTRDGSFELDAD 120

Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK--VIATMGLYSVDMSQGF 169
           G LV A    PVLD     I IP +     +G+ G+IS  G   ++  +   +V +    
Sbjct: 121 GQLVHAGTGAPVLDPDGSEIVIPPEMIDLQIGDDGQISGVGPNGIVLPISQLAVVVPTRL 180

Query: 170 VRRENSGISPNIPPTP-LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228
              +  G        P  E      V++GF+E SNA+ M    ++I +++ F S   ++ 
Sbjct: 181 TELQKRGDGMYSTKLPVAEAPPETRVRQGFVEASNADPMQGTLELIEVSRGFESNVNMMR 240

Query: 229 ENEKSMLEAIRNI 241
             ++ +   ++ I
Sbjct: 241 MQDEMLGRLLQAI 253


>gi|262273527|ref|ZP_06051341.1| flagellar basal-body rod protein FlgG [Grimontia hollisae CIP
           101886]
 gi|262222505|gb|EEY73816.1| flagellar basal-body rod protein FlgG [Grimontia hollisae CIP
           101886]
          Length = 243

 Score =  145 bits (366), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 89/243 (36%), Gaps = 20/243 (8%)

Query: 19  LSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------------QKISFVASGKEY 65
           +  +++N++N +TVGF+  +V F ++    K                 Q  + V +    
Sbjct: 1   MQVISNNLANVNTVGFKQDRVVFEDLFYQTKKQPGAMADQQNEVPGGIQLGNGVRTVGTQ 60

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYPVL 124
                G++ +T    D A+ G  +F +E P      TR+G+F    +G +V+A+G   V 
Sbjct: 61  KLMRSGAYQNTQQATDLAIMGGGFFQIEMPDGSTAYTRNGQFHRNSEGMMVTAAGLPLVP 120

Query: 125 DMASVPIQI-PQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183
           ++      +     +   V        + + I  + L +     G      +        
Sbjct: 121 NIEIPENALSFTVGKDGIVNITMPGEAEPQEIGQLTLVNFTNPAGLEGLGGNLFRETGAS 180

Query: 184 TPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
               +          + +  LE SN + + EM  MI   + +     ++   ++ +    
Sbjct: 181 GAPIEGVPGEEGLGYLSQYALEGSNVSVVEEMVNMITTQRAYEMNAKVVSSADQMLKFIS 240

Query: 239 RNI 241
           +++
Sbjct: 241 QSM 243


>gi|220930464|ref|YP_002507373.1| hypothetical protein Ccel_3101 [Clostridium cellulolyticum H10]
 gi|220000792|gb|ACL77393.1| protein of unknown function DUF1078 domain protein [Clostridium
           cellulolyticum H10]
          Length = 265

 Score =  145 bits (366), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 56/269 (20%), Positives = 101/269 (37%), Gaps = 34/269 (12%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDIDQKIS 57
           M         + LA +++L  + +NM+N +T  ++   V    F E++    ND     +
Sbjct: 1   MIRGLYTSAWSMLANQKKLDVITNNMANVNTTAYKKDTVVYQSFPEILTRRINDTQSPTN 60

Query: 58  FVASG----------KEYLSKEVGSFISTGTELDFALEGDA--------WF------ALE 93
             A            + Y     G  + TG   D A++ D         +F        +
Sbjct: 61  PSAVVGTMELSSDVGEVYTYYTQGQMVQTGDRYDLAIKDDNTGEVASPAFFTVGVINPQD 120

Query: 94  SPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK 153
           +      T++G F +  +  LV+  G   +         I  K   F V  KG I Q G 
Sbjct: 121 NTVQEFYTKNGSFSLDANNQLVTGDGYAVL----GKKGPITLKTGDFTVDSKGNIMQNGA 176

Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQM 213
           V+ T+ +     S    +  N+ +  N            TV +GF E SN N + EM  M
Sbjct: 177 VVDTLRIAQFADSTQLRKLGNNLVMNNGGEVAE---FSGTVIQGFDEQSNVNVIDEMVDM 233

Query: 214 IHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           I + + + +   ++   + ++ +A+  I 
Sbjct: 234 ITVMRAYEANQKVLQAQDGTLEKAVNEIG 262


>gi|91776310|ref|YP_546066.1| flagellar basal-body rod FlgF [Methylobacillus flagellatus KT]
 gi|91710297|gb|ABE50225.1| Flagellar basal-body rod FlgF [Methylobacillus flagellatus KT]
          Length = 246

 Score =  145 bits (366), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 62/241 (25%), Positives = 101/241 (41%), Gaps = 6/241 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       +     + ++ ST A+N++N  T GFR     F  V   + +D     +FV 
Sbjct: 1   MDRLIYTAMTGLKHIMEQQSTTANNLANATTTGFRAQIDSFRAV--PVLSDGLPTRAFVV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
                 +   G   +TG ELD A+    WFA++ P      TR+G FK+ ++G L +  G
Sbjct: 59  DATVGTNFNSGVINTTGRELDLAIRDQGWFAVQRPDGTEAYTRNGNFKLNENGVLQTQDG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176
              + D   + I +  K    N G    ++     + T  +     V+     + R   G
Sbjct: 119 MMVLGDNGPITIPLEAKVAFANDGMVSAVATNVVPLFTNMIGRLKLVNPGDDNLVRGPDG 178

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           +       P+   + VT+  G LE SN N + EM  MI   ++F+  T LI   E +  +
Sbjct: 179 LFETRNREPVPASANVTIVSGALEGSNVNVVEEMVNMISQARQFDLQTKLIQNAENNATK 238

Query: 237 A 237
           A
Sbjct: 239 A 239


>gi|83312595|ref|YP_422859.1| flagellar basal body rod protein [Magnetospirillum magneticum
           AMB-1]
 gi|82947436|dbj|BAE52300.1| Flagellar basal body rod protein [Magnetospirillum magneticum
           AMB-1]
          Length = 253

 Score =  145 bits (366), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 62/245 (25%), Positives = 113/245 (46%), Gaps = 7/245 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND---IDQKIS 57
           MQ +  I L+ Q AL +++  VA+NM+N +T  F+  ++ F E +   ++    +  K+S
Sbjct: 8   MQNTSYIALSRQAALWRQMEVVANNMANANTPAFKGEEMMFREFLVPTRSSERAVGGKLS 67

Query: 58  FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSA 117
           FV           G    T   LDFAL GD +F +E+  G+   R+G F++   G LV++
Sbjct: 68  FVQDVGVLRDTREGPLTKTDNPLDFALHGDGYFQIETEAGMRYARNGHFRLDQTGMLVNS 127

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177
            G    +D    PI     +    V   G +S +   +A + +   +  Q   +  +S  
Sbjct: 128 QGYAV-MDDRDQPIVFAPNETRVEVASDGTVSTENGRVARLKVVKFENDQQMRKAGDSLY 186

Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                P   E +    V +G +E+SN   + EM +M  + +++  +  ++D      L+A
Sbjct: 187 ETTQEP---EVVQSPHVAQGMMEESNVQPVLEMTRMTQILREYQGVQKMLDAEHDRQLKA 243

Query: 238 IRNIA 242
           I+ + 
Sbjct: 244 IQALG 248


>gi|83814111|ref|YP_446742.1| flagellar basal-body rod protein [Salinibacter ruber DSM 13855]
 gi|83755505|gb|ABC43618.1| flagellar basal-body rod protein [Salinibacter ruber DSM 13855]
          Length = 241

 Score =  145 bits (366), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 45/244 (18%), Positives = 96/244 (39%), Gaps = 7/244 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M   F    AA   +  +   VA+N++N  T G++  +V    +   +  D         
Sbjct: 1   MLPRFQNAAAAMSEMRLQQEQVANNLANASTTGYKKDRVFTEALNERLTKDGSPISD--R 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRFKVTDDGSLVSAS 118
             ++      GS   TG  LD AL  + +F  +         TR G F V   G+L +  
Sbjct: 59  RLEQANDLSGGSLKETGNPLDVALGDEGFFVTQPRGGGAERYTRAGHFVVGSQGTLRTPE 118

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178
           G+  + +   + + + Q  +I  + + G I+   + +  + + + +  +   R   +  +
Sbjct: 119 GREVMGEGGPIQLPVEQGGDIS-ISKSGRITAGQQQVGALRVATFENPEQLERTSGASFA 177

Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
                   +      V +G +E SN + + E+  MI + ++F +    I   +  +  A 
Sbjct: 178 --AGDAQPQAAENPVVLQGKVETSNVDPVTELTNMIEIQRQFEAQQKTIQTTDGVLGRAT 235

Query: 239 RNIA 242
           +++ 
Sbjct: 236 QSLG 239


>gi|297585403|ref|YP_003701183.1| fagellar hook-basal body protein [Bacillus selenitireducens MLS10]
 gi|297143860|gb|ADI00618.1| fagellar hook-basal body protein [Bacillus selenitireducens MLS10]
          Length = 277

 Score =  145 bits (366), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 43/274 (15%), Positives = 92/274 (33%), Gaps = 32/274 (11%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIK---VKFSEVVGAIKND------ 51
           M        A  ++ ++    +++N++N +T GF+  +     F  ++            
Sbjct: 1   MLRGLYTAGAGMISQQRNQEMLSNNIANVNTPGFKADQGSLRTFPNMLIQAMGTDHQFPG 60

Query: 52  -----IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA--------------WFAL 92
                I +  + V   +   +   G  + T    D AL                  +   
Sbjct: 61  RRSPVIGELSTGVYMQERTPNFRQGDLMETTNSTDIALLQGETPMDEDSGLPGMLAFQIQ 120

Query: 93  ESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG 152
                I  TR+G F V  DG L   +G Y +    +      +   +   GE        
Sbjct: 121 NDDGDIRYTRNGDFTVDSDGFLTMGTGHYVLDTDGAPIEVGNEDFRVNQNGEIFTDDADE 180

Query: 153 KVIATMGLYSVDMSQGFVRRENSGIS----PNIPPTPLEDLSGVTVKRGFLEDSNANSMY 208
             +  + +  +      V+  +  +       I      D     +++G+LE SN ++  
Sbjct: 181 VFLGQIDIMLIPDPGLLVKEGSGFLRYDGDEAIASAIGNDDVLYQLQQGYLERSNVDAGQ 240

Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            M QM+   + F +   ++   ++S+  A+ +I 
Sbjct: 241 TMTQMMAALRNFEANQKVLQAYDQSLERAVNDIG 274


>gi|325509555|gb|ADZ21191.1| flagellar basal body rod protein FlgG [Clostridium acetobutylicum
           EA 2018]
          Length = 258

 Score =  145 bits (366), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 44/260 (16%), Positives = 91/260 (35%), Gaps = 22/260 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKND------ 51
           M       ++  +  E +   + +N++NT+TVGF++  +    F +V+    +       
Sbjct: 1   MVRGLYTAISGMVVQEAKQDVITNNLANTNTVGFKSDSLSSQSFEDVLIQNYSKRENGVP 60

Query: 52  ----IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR---GIILTRDG 104
               +                  G+  +T  + DFA++G  +F +           TR+G
Sbjct: 61  ERTLLGTLNLGSRINDTATDFTGGNIQATDIDTDFAIQGRGFFTVRKNNGSDQNYYTRNG 120

Query: 105 RFKVTDDGSLVSASGKYPVLDM--ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162
            F V  DG ++  SG Y +      +    I       +    G +S  G+         
Sbjct: 121 HFHVNMDGYMLDDSGDYIMGTNLATNTTEPIKLGKGSVSCDPYGNVSVDGQAKYKFNFVD 180

Query: 163 VDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222
            +      +  ++                 +V+   LE SN N M  M  M+   + F S
Sbjct: 181 FNDYTKLKKIGDNLFQ----GDNPIQNFNASVENKALEGSNVNVMKGMTDMMTTMRVFES 236

Query: 223 ITTLIDENEKSMLEAIRNIA 242
               +   ++++ +A+  + 
Sbjct: 237 NQKTVQSIDETVGKAVNEVG 256


>gi|221635451|ref|YP_002523327.1| flagellar basal-body rod protein FlgG [Thermomicrobium roseum DSM
           5159]
 gi|221158111|gb|ACM07229.1| flagellar basal-body rod protein FlgG [Thermomicrobium roseum DSM
           5159]
          Length = 259

 Score =  145 bits (366), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 46/256 (17%), Positives = 78/256 (30%), Gaps = 17/256 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------D 51
           M+  +   ++   A + RL T+A N++N +T GF+  +  F+ V                
Sbjct: 1   MEALYFPAVSGVRAQQVRLDTIAHNLANLETDGFKAARADFTAVPPQEYRVARAGEAPLG 60

Query: 52  IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF--ALESPRGIILTRDGRFKVT 109
                S V          +G    TG   D AL G   F             R GR  + 
Sbjct: 61  PVPIGSGVELSATTRQFTLGPVEVTGDPFDLALAGPDTFVATELPDGTTAFRRSGRLSID 120

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE-KGEISQKGKVIATMGLYSVDMSQG 168
             G LV   G      +         +         +   S   + I  + L      QG
Sbjct: 121 ATGRLVFEDGSLLQPPLVLPAGAQLDRIAPDGTVFVRAAGSGDAQPIGRLELVRFPNPQG 180

Query: 169 FVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223
            +                E  +        V  G  E SN + + +M Q+I   + + + 
Sbjct: 181 LLAAGQGRWIATEAAGQPETGAPGEGNWPPVLSGVREHSNVDLVDQMTQLIMAQRAYTAN 240

Query: 224 TTLIDENEKSMLEAIR 239
              +   ++ +  A R
Sbjct: 241 LRSLQTIDELIEIATR 256


>gi|254251192|ref|ZP_04944510.1| flagellar basal-body rod protein [Burkholderia dolosa AUO158]
 gi|124893801|gb|EAY67681.1| flagellar basal-body rod protein [Burkholderia dolosa AUO158]
          Length = 252

 Score =  145 bits (366), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 53/249 (21%), Positives = 90/249 (36%), Gaps = 9/249 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID----QKI 56
           M       +        + + VA+N++N  T GFR     +  V     +          
Sbjct: 1   MDRLIYTAMTGASQSLDQQAIVANNLANASTTGFRAQLATYRAVPMNFGDGSTVDPATTR 60

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLV 115
           ++V +         G    TG  LD A++G  W +++ P G    TR G   V  +G LV
Sbjct: 61  TYVLASTPGADFAPGPISRTGNPLDVAVQGPGWLSVQLPDGGEAYTRAGNLHVDQNGQLV 120

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT---MGLYSVDMSQGFVRR 172
           +AS    V +   + +    +  I   G    +       A      L  V+     + R
Sbjct: 121 NASNLPVVGNGGPISVPPNAEVTIGKDGTVSALMPGDPPTAVAIVDQLKLVNPDPATLTR 180

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            N G+       P +    V V    LE SN N +  M  MI   + F   + LI+  ++
Sbjct: 181 GNDGLFRTADGNPADADPNVVVVPNSLEGSNVNPVNAMVSMIDNARAFQLQSKLIETADQ 240

Query: 233 SMLEAIRNI 241
           +  ++   +
Sbjct: 241 N-EQSANQL 248


>gi|219670131|ref|YP_002460566.1| hypothetical protein Dhaf_4121 [Desulfitobacterium hafniense DCB-2]
 gi|219540391|gb|ACL22130.1| protein of unknown function DUF1078 domain protein
           [Desulfitobacterium hafniense DCB-2]
          Length = 251

 Score =  145 bits (366), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 55/255 (21%), Positives = 106/255 (41%), Gaps = 20/255 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKND------ 51
           M      G A  LA + +   +ADN++N  T G++  +     F E++    N       
Sbjct: 1   MIKGLYTGAAGMLAAQTQSEIIADNVANIRTPGYKGEESSNKAFPEMLMMRTNTENEIPG 60

Query: 52  ---IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA-WFALESPRGIILTRDGRFK 107
              I    + V   +       G   +T    D AL  +  +  +++P G   TR+G+ +
Sbjct: 61  NTLIGGIGTGVVVDQITRMNVQGVLQTTDIPTDLALTAEEVFLVVDTPNGERYTRNGQLQ 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           +  +G L +A G   + +       I    + F V  +G I+ +G  +  + L  +  + 
Sbjct: 121 LNSEGMLQTADGYPVLGEE----GPIGPLSKNFQVDAQGGITDQGVTMDRLRLVQIP-AV 175

Query: 168 GFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
           G +R   S  + N P    +      V +G LE SN N   +M +MI + + + +   +I
Sbjct: 176 GLLREGQSLYASNQPV--QDFAGNEAVLQGTLEGSNVNLPGQMVKMITVMRAYEANQKVI 233

Query: 228 DENEKSMLEAIRNIA 242
             ++ ++ +A+  I 
Sbjct: 234 QTHDATLEKAVNEIG 248


>gi|167623362|ref|YP_001673656.1| flagellar basal body rod protein FlgF [Shewanella halifaxensis
           HAW-EB4]
 gi|167353384|gb|ABZ75997.1| flagellar basal-body rod protein FlgF [Shewanella halifaxensis
           HAW-EB4]
          Length = 247

 Score =  145 bits (365), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 45/238 (18%), Positives = 93/238 (39%), Gaps = 7/238 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + ++        L+  A+N++N +T GF++   +   +      +      F  
Sbjct: 1   MDKLLYVAMSGAKQNMNSLAVSANNLANANTDGFKSSLAQARSM--QAFGEGLPTRVFSM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119
           +     +   G   +TG +LD A++GD W A+++  G    TR G  +  + G L +  G
Sbjct: 59  TETPSANFSSGPIKTTGRDLDIAVKGDGWIAVQAENGGEAYTRSGSLRFDNSGVLRNDRG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
              + D   + + +P +    +      +   G     +        V+     + R   
Sbjct: 119 TPVMGDNGPIVLPLPIEKVEISQDGIVSVRPSGATAEVIEEVGRIKLVNPGNQNLMRGED 178

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           G+   +          V +  G +E SN N+++EM  MI L ++F     ++   E++
Sbjct: 179 GLFRLMSGENAPSDPSVGLLSGAVEGSNVNAVHEMVSMIDLQRQFEMQVKMMKTAEEN 236


>gi|291613039|ref|YP_003523196.1| flagellar basal-body rod protein FlgF [Sideroxydans lithotrophicus
           ES-1]
 gi|291583151|gb|ADE10809.1| flagellar basal-body rod protein FlgF [Sideroxydans lithotrophicus
           ES-1]
          Length = 247

 Score =  145 bits (365), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 56/241 (23%), Positives = 95/241 (39%), Gaps = 6/241 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       +       Q+ ++V+ N++N +T GFR     F  V   +  +     +FV 
Sbjct: 1   MDRLIYTAMTGASHTLQQQASVSQNLANINTPGFRASIDAFRSV--PLVGEGLPTRTFVV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119
                     G   STG  LD A++G  W A++        TR+G F+V  +G L + SG
Sbjct: 59  DSTAGADFTPGVIQSTGRSLDVAVDGKGWIAVQDANGNEAYTRNGSFQVLPNGILQTNSG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK---VIATMGLYSVDMSQGFVRRENSG 176
              + D   + I    +  I   G    +    +   V+    L   +  +  + R    
Sbjct: 119 LNVMGDSGPITIPPDTEVSIAKDGTISTVPTTNQKNGVVVVGRLKLTNPPEDQLVRGEDA 178

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           +       P +  + VTV  G LE SN N +  M  MI L ++F+    L+   + +  +
Sbjct: 179 LFRMKDGNPADADAKVTVVSGSLESSNVNMVESMVNMISLARQFDQQMKLLQTADDNAKQ 238

Query: 237 A 237
           A
Sbjct: 239 A 239


>gi|288554368|ref|YP_003426303.1| flagellar basal-body rod protein [Bacillus pseudofirmus OF4]
 gi|288545528|gb|ADC49411.1| flagellar basal-body rod protein [Bacillus pseudofirmus OF4]
          Length = 272

 Score =  145 bits (365), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 44/271 (16%), Positives = 99/271 (36%), Gaps = 31/271 (11%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDIDQKI- 56
           M        A  +A +QR   + +N++N +T G++  +     F  ++    +    K  
Sbjct: 1   MLRGLYGAAAGMIAQQQRQEMLTNNLANANTPGYKADQASLRAFPNMLIKAMDTQGPKGA 60

Query: 57  ---------SFVASGKEYLSKEVGSFISTGTELDFAL------------EGDAWFALESP 95
                    + V   +   +   G    TG   D AL             G  ++ ++S 
Sbjct: 61  SAPIIGELATGVYLQERMPNFRQGDINETGNSTDIALLQGVLPEGESGRPGALFYTIQSN 120

Query: 96  RGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI 155
             I+ +R+G F +   G L +  G+Y +           +   +   G     S  G VI
Sbjct: 121 DEILYSRNGNFTIDGAGFLTTTEGQYVLGTNGESLQVGDENFTLDPNGTI--TSSDGAVI 178

Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTV----KRGFLEDSNANSMYEMG 211
             + +   +     V+  +  +           +    +    ++GF+E SN ++   M 
Sbjct: 179 GQINVAYAEDPMLLVKEGDGLLRYTEEGELPTAIGNAEINYQLQQGFIERSNVDASQTMT 238

Query: 212 QMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           +M++  + F +   ++   ++S+ +A+  + 
Sbjct: 239 EMMNAYRSFEANQRILQAYDQSLDKAVNEVG 269


>gi|254519398|ref|ZP_05131454.1| flagellar basal body rod protein FlgG [Clostridium sp. 7_2_43FAA]
 gi|226913147|gb|EEH98348.1| flagellar basal body rod protein FlgG [Clostridium sp. 7_2_43FAA]
          Length = 260

 Score =  145 bits (365), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 52/262 (19%), Positives = 100/262 (38%), Gaps = 23/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKND------ 51
           M  S    ++  ++LE R + + +NMSN +T GF+   +    F EV+   ++       
Sbjct: 1   MIRSLYTAVSGLISLENRQNNITNNMSNANTTGFKGDNLSIKSFDEVMIQNRDKVVNGNN 60

Query: 52  ----IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF----ALESPRGIILTRD 103
               +              +   G   +T  + DFA+EG  +F       +   +I TRD
Sbjct: 61  VVQKLGSISLGAEIDSVDTAFTQGLIKNTDKQTDFAIEGRGFFAIQRQTNNGNEVIYTRD 120

Query: 104 GRFKVTDDGSLVSASGKYPVLDMA--SVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLY 161
           G FKV +DG L++ +    +           I    + F + +   +    +   T+   
Sbjct: 121 GNFKVGNDGYLINTNSDRVLGMNKNTGALEPIFVGGDKFILDQNNNLYIGNRATHTLATA 180

Query: 162 SVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221
             +      +  ++              + V V +G LE SN N   EM  MI   + F 
Sbjct: 181 DFNDYGSLEKIGDNYF----KGENPIYNAQVWVTQGALEGSNVNISNEMVNMITTMRNFE 236

Query: 222 SITTLIDENEKSMLEAIRNIAS 243
           +   ++   ++++ +A   I +
Sbjct: 237 TNQKIVQTIDETLGKAANEIGA 258


>gi|153953797|ref|YP_001394562.1| flagellar basal body rod protein FlgG [Clostridium kluyveri DSM
           555]
 gi|219854413|ref|YP_002471535.1| hypothetical protein CKR_1070 [Clostridium kluyveri NBRC 12016]
 gi|146346678|gb|EDK33214.1| FlgG1 [Clostridium kluyveri DSM 555]
 gi|219568137|dbj|BAH06121.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 255

 Score =  145 bits (365), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 50/258 (19%), Positives = 90/258 (34%), Gaps = 21/258 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGA---------- 47
           M  SF   ++  +  E +   + +N++N +TVGF+   +K   F+EV+            
Sbjct: 1   MIRSFYTAVSGMIVQEAKQDVITNNLANVNTVGFKQDDLKSTPFNEVLIQNYDKVVNGKN 60

Query: 48  IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
           ++N I                  G+  ST    DFA++G  +F +         TRDG F
Sbjct: 61  VRNVIGSMTLGSKIDSVDTGFTQGTIESTDISTDFAIDGRGFFTVRREDGNEFYTRDGHF 120

Query: 107 KVTDDGSLVSASGKYPVL--DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
            V   G LV  SG   +   +       I   +        G IS  G     +     +
Sbjct: 121 HVNTQGILVDDSGNTVIGRDNQTGALGAINVGNGDITSDAYGNISIDGNERYKIYTVDFN 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224
                 +  ++                  V++  LE SN N +  M  +I   + F +  
Sbjct: 181 DYNDLTKVGDNLY-----TGENAAEINTVVRQKSLEKSNINLVNTMSDLITTMRTFETDQ 235

Query: 225 TLIDENEKSMLEAIRNIA 242
            ++   + ++ + I    
Sbjct: 236 KVVQSIDGTLDKLINEAG 253


>gi|206558969|ref|YP_002229729.1| flagellar basal body rod protein FlgF [Burkholderia cenocepacia
           J2315]
 gi|198035006|emb|CAR50878.1| flagellar basal-body rod protein FlgF (putative proximal rod
           protein) [Burkholderia cenocepacia J2315]
          Length = 252

 Score =  145 bits (365), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 51/249 (20%), Positives = 89/249 (35%), Gaps = 9/249 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----DIDQKI 56
           M       +        + + VA+N++N  T GFR     +  V     +    D     
Sbjct: 1   MDRLIYTAMTGASQSLDQQAVVANNLANASTTGFRAQLATYRAVPMNFGDGSKIDPTTTR 60

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLV 115
           ++V S         G    TG  LD A++G  W ++++       TR G   V ++G LV
Sbjct: 61  TYVLSSTPGADYAPGPITRTGNPLDVAVQGPGWLSVQTADGSEAYTRAGNLHVDENGQLV 120

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT---MGLYSVDMSQGFVRR 172
           +AS    + +   + +    +  I   G    +       A      +  V+     + R
Sbjct: 121 NASNLPVIGNGGPISVPPNAEVTIGKDGTVSALMPGDPPTAVAIVDQMKLVNPDPATLTR 180

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            N G+       P +    V V    LE SN N +  M  MI   + F   + LI   ++
Sbjct: 181 GNDGLFRTADGNPADVDPNVVVTPNSLEGSNVNPVTAMVAMIDNARAFQLQSKLIQTADQ 240

Query: 233 SMLEAIRNI 241
           +  +    +
Sbjct: 241 N-EQTANQL 248


>gi|149911701|ref|ZP_01900309.1| flagellar basal-body rod protein FlgF [Moritella sp. PE36]
 gi|149805231|gb|EDM65248.1| flagellar basal-body rod protein FlgF [Moritella sp. PE36]
          Length = 247

 Score =  145 bits (364), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 49/238 (20%), Positives = 95/238 (39%), Gaps = 7/238 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     I ++        L+  A+N++N +T GF+    +   +      +      F  
Sbjct: 1   MDNMLYISMSGAKENMNALAVRANNLANVNTHGFKADFEQARSM--QAFGEGLPTRVFAI 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASG 119
           +         G+   TG  LD AL+GD W ++ +       TR G   ++  G L+++SG
Sbjct: 59  TESPGQDFTGGALQQTGNALDVALQGDGWLSVLDDKNNEGYTRSGSLHMSATGELLTSSG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS----VDMSQGFVRRENS 175
           +  + +   + I  P +    +   + EI  +G     +        V+     + +   
Sbjct: 119 RPVLGENGPIIIPTPIEQIQIHADGRIEIRPQGAPANALEQVDQLKLVNPDVRNLVKGYD 178

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           G+      TP      V V  G LE SN +++ E+  MI+L ++F     ++   E++
Sbjct: 179 GLFRQADGTPAVVDPNVQVAGGVLETSNVSAVGELTGMINLQRQFEMQIKMMKTAEEN 236


>gi|229918635|ref|YP_002887281.1| hypothetical protein EAT1b_2922 [Exiguobacterium sp. AT1b]
 gi|229470064|gb|ACQ71836.1| protein of unknown function DUF1078 domain protein [Exiguobacterium
           sp. AT1b]
          Length = 303

 Score =  145 bits (364), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 45/300 (15%), Positives = 90/300 (30%), Gaps = 61/300 (20%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +   G++     + +L  V +N++N +T G++  +V F ++V               
Sbjct: 1   MLRAMYSGISGLKNFQSKLDVVGNNIANVNTFGYKKGRVTFKDLVSQQVGSASAGNATTG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                +                G+  +TG  LD  + G+ ++A      I  TR G F  
Sbjct: 61  GVNPKEVGLGGTMATVDNVYNQGAMQNTGRALDVGISGEGFYATMVNGQIQYTRAGNFYT 120

Query: 109 TDDGSLVSASGKYPVLDMAS--VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---- 162
            + G+LV+  G Y +    +   P  +            G       + A  G  +    
Sbjct: 121 DNQGNLVTGDGTYLIGSQTNTLPPSGVAGVAATPTAANMGANLDAPYLAADAGTQTVKYG 180

Query: 163 --------------------------------------VDMSQGFVRRENSGISPNIPPT 184
                                                    + G  +   +    +    
Sbjct: 181 RIKIPTDAKSLSIGKDGQVSFVAANGELRIAGYIVTSNFSNNAGLSKVGANNFVQSQNSG 240

Query: 185 PLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             +           +  G LE SN +   E  +MI   + F + T +I  +++ + E + 
Sbjct: 241 APQFGVPGAGGRGELVSGALEMSNVDLSEEFTEMIVAQRGFQANTRIITTSDEILQELVN 300


>gi|221215572|ref|ZP_03588535.1| flagellar basal-body rod protein FlgF [Burkholderia multivorans
           CGD1]
 gi|221164560|gb|EED97043.1| flagellar basal-body rod protein FlgF [Burkholderia multivorans
           CGD1]
          Length = 252

 Score =  145 bits (364), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 52/249 (20%), Positives = 90/249 (36%), Gaps = 9/249 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----DIDQKI 56
           M       +        + + VA+N++N  T GFR     +  V     +    D +   
Sbjct: 1   MDRLIYTAMTGASQSLDQQAIVANNLANASTTGFRAQLATYRAVPMNFGDGSAIDPNTTR 60

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLV 115
           ++V +         G    TG  LD A++G  W +++ P      TR G   V  +G LV
Sbjct: 61  TYVLASTPGADFAPGPITRTGNPLDVAVQGPGWLSVQLPDGSEAYTRAGNLHVDQNGQLV 120

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT---MGLYSVDMSQGFVRR 172
           +AS    V +   + +    +  I   G    +       A      +  V+     + R
Sbjct: 121 NASNLPVVGNGGPISVPPNAEVTIGKDGTVSALMPGDPPTAVAIVDQMKLVNPDPATLVR 180

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            N G+       P +    V V    LE SN N +  M  MI   + F   + LI   ++
Sbjct: 181 GNDGLFRTTDGNPADADPNVAVVPNSLEGSNVNPVTAMVAMIDNARAFQLQSKLIQTADQ 240

Query: 233 SMLEAIRNI 241
           +  ++   +
Sbjct: 241 N-EQSANQL 248


>gi|161526185|ref|YP_001581197.1| flagellar basal body rod protein FlgF [Burkholderia multivorans
           ATCC 17616]
 gi|189349099|ref|YP_001944727.1| flagellar basal body rod protein FlgF [Burkholderia multivorans
           ATCC 17616]
 gi|160343614|gb|ABX16700.1| flagellar basal-body rod protein FlgF [Burkholderia multivorans
           ATCC 17616]
 gi|189333121|dbj|BAG42191.1| flagellar basal-body rod protein [Burkholderia multivorans ATCC
           17616]
          Length = 252

 Score =  145 bits (364), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 52/249 (20%), Positives = 90/249 (36%), Gaps = 9/249 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----DIDQKI 56
           M       +        + + VA+N++N  T GFR     +  V     +    D +   
Sbjct: 1   MDRLIYTAMTGASQSLDQQAIVANNLANASTTGFRAQLATYRAVPMNFGDGSAVDPNTTR 60

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLV 115
           ++V +         G    TG  LD A++G  W +++ P      TR G   V  +G LV
Sbjct: 61  TYVLASTPGADFAPGPITRTGNPLDVAVQGPGWLSVQLPDGSEAYTRAGNLHVDQNGQLV 120

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT---MGLYSVDMSQGFVRR 172
           +AS    V +   + +    +  I   G    +       A      +  V+     + R
Sbjct: 121 NASNLPVVGNGGPISVPPNAEVTIGKDGTVSALMPGDPPTAVAIVDQMKLVNPDPATLVR 180

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            N G+       P +    V V    LE SN N +  M  MI   + F   + LI   ++
Sbjct: 181 GNDGLFRTTDGNPADADPNVAVVPNSLEGSNVNPVTAMVAMIDNARAFQLQSKLIQTADQ 240

Query: 233 SMLEAIRNI 241
           +  ++   +
Sbjct: 241 N-EQSANQL 248


>gi|153834440|ref|ZP_01987107.1| flagellar basal-body rod protein FlgF [Vibrio harveyi HY01]
 gi|156973588|ref|YP_001444495.1| flagellar basal body rod protein FlgF [Vibrio harveyi ATCC
           BAA-1116]
 gi|269961600|ref|ZP_06175962.1| flagellar basal-body rod protein FlgF [Vibrio harveyi 1DA3]
 gi|148869136|gb|EDL68168.1| flagellar basal-body rod protein FlgF [Vibrio harveyi HY01]
 gi|156525182|gb|ABU70268.1| hypothetical protein VIBHAR_01291 [Vibrio harveyi ATCC BAA-1116]
 gi|269833641|gb|EEZ87738.1| flagellar basal-body rod protein FlgF [Vibrio harveyi 1DA3]
          Length = 249

 Score =  145 bits (364), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 60/241 (24%), Positives = 100/241 (41%), Gaps = 11/241 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  + ++      Q L   A+N++N  T GFR    +   +      +      F  
Sbjct: 1   MDRALFLAMSGAKQNMQALQLRANNLANVSTTGFRADLAQARSM--QAYGEGLPSRVFSM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119
           + +   +   GS I+TG +LD  +EG  W + ++      LTR+G  KV  +G L +ASG
Sbjct: 59  TERPGHNFAQGSVITTGRDLDITVEGSGWISVMDQTGKEGLTRNGNLKVDQNGLLTNASG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172
            + VL     PI +P       +G  G IS   +      L  VD         Q   + 
Sbjct: 119 -HVVLGENDAPITLPIPVSKIEIGRDGTISVLPQGAPAEELEVVDRIKLVRTDDQNLFKD 177

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            N       P  P E    ++++ G +E SN N++ EM  +I L ++F     ++   E+
Sbjct: 178 TNGLFRHKTPNQPYEADGSISIQTGAIEGSNVNAVGEMTALIDLQRQFEMQVKMMSTAEE 237

Query: 233 S 233
            
Sbjct: 238 M 238


>gi|134095096|ref|YP_001100171.1| basal-body rod protein [Herminiimonas arsenicoxydans]
 gi|133738999|emb|CAL62047.1| Flagellar basal-body rod protein FlgF (Putative proximal rod
           protein) [Herminiimonas arsenicoxydans]
          Length = 246

 Score =  145 bits (364), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 60/246 (24%), Positives = 100/246 (40%), Gaps = 6/246 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       +     + ++ +TV  N+SN  T GFR     F  V   + N      +FV 
Sbjct: 1   MDRLIYTAMTGAKQILEQQATVTHNLSNVSTTGFRAQLDTFRAV--PVVNAALPTRTFVV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
                     G F  TG +LD A++G  W A+E        TR G  KV ++G L + SG
Sbjct: 59  DSTVGNDFRAGPFQQTGRDLDVAIQGKGWLAVERADGTEGYTRSGSLKVNENGVLQTQSG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEI---SQKGKVIATMGLYSVDMSQGFVRRENSG 176
              + D   + I    +  I   G    +   S+ G+ I    L  V+  +  ++R + G
Sbjct: 119 LNVLGDGGPISIPPDVQITIAKDGTISSVESGSKPGQTIQVGRLKLVNPDEANLKRADDG 178

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           +        +   + V++  G +E SN N +  M  MI L ++F     ++   E +  +
Sbjct: 179 LFVTKDGEDVAADADVSLVSGAVEGSNVNVVDAMVNMITLARQFELHMNMLKHAESNAAK 238

Query: 237 AIRNIA 242
           A   +A
Sbjct: 239 ATEFLA 244


>gi|261856359|ref|YP_003263642.1| flagellar basal-body rod protein FlgF [Halothiobacillus
           neapolitanus c2]
 gi|261836828|gb|ACX96595.1| flagellar basal-body rod protein FlgF [Halothiobacillus
           neapolitanus c2]
          Length = 247

 Score =  145 bits (364), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 54/236 (22%), Positives = 93/236 (39%), Gaps = 7/236 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     I ++         ST A+N++N  T GF+     F  +   +         +  
Sbjct: 1   MDRLAYIAMSGAKQTLLAQSTNANNLANVSTQGFKADLDAFQSM--PVYGPGYASRVYAQ 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
             +       G  ++TG  LD AL+G  + A+++P      TR G   ++ +G L + +G
Sbjct: 59  DERSGTDFAQGPLMTTGRSLDVALKGQGFMAVQAPDGSTAYTRRGDLHISPNGQLQTGTG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176
              + +   + I    K +I   G    I   G V A   +     V+     +++   G
Sbjct: 119 APVLGNQGPIAIPPASKIDILGDGTISIIPLGGDVNAPAQIDRIRLVNPPLADLQKRGDG 178

Query: 177 ISPNIPPTP-LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
           +    P TP  +  + V V  G LE SN N +  M +MI   + F   T +I   +
Sbjct: 179 LFALKPNTPVPQPDAAVQVASGVLEGSNVNPVDSMVKMIEYGRLFEMQTKMIKTAD 234


>gi|163744348|ref|ZP_02151708.1| hypothetical protein OIHEL45_02155 [Oceanibulbus indolifex HEL-45]
 gi|161381166|gb|EDQ05575.1| hypothetical protein OIHEL45_02155 [Oceanibulbus indolifex HEL-45]
          Length = 247

 Score =  145 bits (364), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 58/244 (23%), Positives = 108/244 (44%), Gaps = 2/244 (0%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  S +I ++   +L+++L   A+N++N  T G++   V F  ++       D + +FV+
Sbjct: 1   MTESSHISMSLATSLQRQLDITANNIANASTAGYKGEHVVFEALLQNNTAMGDDQAAFVS 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
               Y+    G+   TG  LD AL G+ WF+ E+        RDG F +   G+L   SG
Sbjct: 61  DTGSYIDTRPGALSQTGNPLDVALHGEGWFSYETADGQQAYGRDGSFTLDTQGNLTLLSG 120

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEIS-QKGKVIATMGLYSVDMSQGFVRRENSGIS 178
              +    +      +     N+ E G IS  +   +  +G++ V   Q + R     + 
Sbjct: 121 AKVLDAGGAPIQLPTEGLGDINISEDGTISGSETGPLGRIGVFDVPEIQSYKRLGAGMLV 180

Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
                        V V++G LE SN N + EM ++I + + +    T++   +    +++
Sbjct: 181 APEGAAKPAVAESVQVRQGTLELSNVNPVREMTRLIDVQRAYERTNTMMGNADDLRRDSL 240

Query: 239 RNIA 242
           + IA
Sbjct: 241 KRIA 244


>gi|124268253|ref|YP_001022257.1| flagellar basal body and hook protein [Methylibium petroleiphilum
           PM1]
 gi|124261028|gb|ABM96022.1| flagellar basal body and hook protein [Methylibium petroleiphilum
           PM1]
          Length = 242

 Score =  145 bits (364), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 54/242 (22%), Positives = 90/242 (37%), Gaps = 6/242 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + ++   A  QR  T+A+N++N  T GFR     F  V   ++ D      +  
Sbjct: 1   MDRMIYLSMSGAKATMQRQETLANNLANASTTGFRAELQAFRAV--PVRGDGASTRVYSL 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119
                     G   +TG  LD A++G+AW A++        TR G  +V  +G+L ++ G
Sbjct: 59  ETTTGYDPTPGPMAATGRALDVAMQGNAWLAVQGLDGTEAYTRMGSLQVDAEGTLKTSGG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
              + D   + +      +I   G        G V +   L  V       R ++     
Sbjct: 119 LTVLGDGGPIALPANSSPQIAADGTVSVKQANGGVTSVGRLKLVTPEAALQRGDDGLFRA 178

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
                P        V  G LE SN N +  M  MI   ++F S   ++    +   +A  
Sbjct: 179 ADGDLP--VDPNARVAEGTLEGSNVNPIENMVAMIAAARQFESQMKMLQTA-EGDEKAAS 235

Query: 240 NI 241
            +
Sbjct: 236 QL 237


>gi|221199740|ref|ZP_03572783.1| flagellar basal-body rod protein FlgF [Burkholderia multivorans
           CGD2M]
 gi|221208655|ref|ZP_03581655.1| flagellar basal-body rod protein FlgF [Burkholderia multivorans
           CGD2]
 gi|221171466|gb|EEE03913.1| flagellar basal-body rod protein FlgF [Burkholderia multivorans
           CGD2]
 gi|221179979|gb|EEE12383.1| flagellar basal-body rod protein FlgF [Burkholderia multivorans
           CGD2M]
          Length = 252

 Score =  145 bits (364), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 52/249 (20%), Positives = 90/249 (36%), Gaps = 9/249 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----DIDQKI 56
           M       +        + + VA+N++N  T GFR     +  V     +    D +   
Sbjct: 1   MDRLIYTAMTGASQSLDQQAIVANNLANASTTGFRAQLATYRAVPMNFGDGSAIDPNTTR 60

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLV 115
           ++V +         G    TG  LD A++G  W +++ P      TR G   V  +G LV
Sbjct: 61  TYVLASTPGADFAPGPITRTGNPLDVAVQGPGWLSVQLPDGSEAYTRAGNLHVDQNGQLV 120

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT---MGLYSVDMSQGFVRR 172
           +AS    V +   + +    +  I   G    +       A      +  V+     + R
Sbjct: 121 NASNLPVVGNGGPISVPPNAEVTIGKDGTVSALMPGDPPTAVAIVDQMKLVNPDPAALVR 180

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            N G+       P +    V V    LE SN N +  M  MI   + F   + LI   ++
Sbjct: 181 GNDGLFRTTDGNPADADPNVAVVPNSLEGSNVNPVTAMVAMIDNARAFQLQSKLIQTADQ 240

Query: 233 SMLEAIRNI 241
           +  ++   +
Sbjct: 241 N-EQSANQL 248


>gi|209884527|ref|YP_002288384.1| flagellar basal body rod protein [Oligotropha carboxidovorans OM5]
 gi|209872723|gb|ACI92519.1| flagellar basal body rod protein [Oligotropha carboxidovorans OM5]
          Length = 255

 Score =  144 bits (363), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 63/252 (25%), Positives = 118/252 (46%), Gaps = 11/252 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN-----DIDQK 55
           M+ +  + L+ Q+ LE++LS VA+N++N  T G++     F E + +  +       D++
Sbjct: 1   MENTSLVALSRQMTLERQLSVVANNVANIGTNGYKADSSLFEEYLRSGAHEDNFVGFDRR 60

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115
           +SFV           G   +T   LD A+ G  +F +++P G   +RDGR ++   G LV
Sbjct: 61  VSFVHDRATLRDFGQGPLENTKAPLDVAISGKGFFTVQTPNGERYSRDGRLQINAQGQLV 120

Query: 116 SASGKYPVLDM-----ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170
           ++SG   +              +   D       +G I+Q   +   + L S    Q   
Sbjct: 121 NSSGYPVLGTNGVITFQPTDHDVKISDNGTITVLEGTITQTDSIRGRLRLTSFASPQQLQ 180

Query: 171 RRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
           +  ++           +D +  TVK+GF+E SN N++ EM +M+ +T+ + +I+ L+ + 
Sbjct: 181 KEGSNL-FTAPANVTGQDDTVSTVKQGFIERSNVNAIAEMSRMLEITRTYQNISNLMQQQ 239

Query: 231 EKSMLEAIRNIA 242
                 AI+ +A
Sbjct: 240 ADLRKNAIQTLA 251


>gi|326202441|ref|ZP_08192310.1| fagellar hook-basal body protein [Clostridium papyrosolvens DSM
           2782]
 gi|325987559|gb|EGD48386.1| fagellar hook-basal body protein [Clostridium papyrosolvens DSM
           2782]
          Length = 265

 Score =  144 bits (363), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 53/269 (19%), Positives = 101/269 (37%), Gaps = 34/269 (12%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDIDQKIS 57
           M         + LA +++L  + +NM+N +T  ++   V    F E++    ND     +
Sbjct: 1   MIRGLYTSAWSMLANQKKLDVITNNMANVNTTAYKKDTVVYQSFPEILTRRINDTQSPTN 60

Query: 58  FVASG----------KEYLSKEVGSFISTGTELDFALEGDA--------WF------ALE 93
             A            + Y     G  + TG   D A++ D         +F        +
Sbjct: 61  PSAVVGSMELSSDVGEVYTYYTPGQIVQTGDRYDLAIKDDNTGDKASPAFFTVGVTNPQD 120

Query: 94  SPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK 153
           +      T++G F +  +  LV+  G   +         I  K   F V  KG I Q G 
Sbjct: 121 NTMQEFYTKNGSFTLNSNNQLVTGDGYAVL----GKKGPITLKQGDFTVDSKGNIMQNGA 176

Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQM 213
           V+ T+ +     S    +  N+ +  N            +V +G+ E SN N + EM  M
Sbjct: 177 VVDTLRIAQFADSTQLRKFGNNLVQNNGGEVAE---FTGSVIQGYDELSNVNIIDEMVDM 233

Query: 214 IHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           I + + + +   ++   + ++ +A+  + 
Sbjct: 234 ITVMRAYEANQKVLQAQDGTLDKAVNEVG 262


>gi|149927799|ref|ZP_01916050.1| hypothetical protein LMED105_11310 [Limnobacter sp. MED105]
 gi|149823421|gb|EDM82652.1| hypothetical protein LMED105_11310 [Limnobacter sp. MED105]
          Length = 245

 Score =  144 bits (363), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 57/244 (23%), Positives = 102/244 (41%), Gaps = 6/244 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     +   A      R   +A+N++N +T GFR   + F      +  +     SF  
Sbjct: 1   MDKLIFLAAQAAKGTMSRQENIANNLANVNTPGFRQQLMAFQS--APVTGEGSGSRSFAV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
                     G   STG E+D A++G+ WFA+   +     TR+G F++   G+LV+  G
Sbjct: 59  ETSIGFDTTPGQIQSTGREMDVAIQGEGWFAVNDAKGNEAYTRNGSFQLDGQGNLVTQEG 118

Query: 120 KYPVLDMASVPIQIPQK--DEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177
              +     + +    +   E         IS    V+    L  V++ +G + R + G+
Sbjct: 119 YSVIGSNGPINVPPDHRLSFEGDGSVSAIPISGDTNVVQLGRLKLVNIPEGDINRGDDGL 178

Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                  P E    V V  GF+E SN N++  M QMI   +++ +   +I   +++  +A
Sbjct: 179 FRAANGDPAEADLNVRVAGGFIESSNVNAVDMMVQMITAARQYETQMKMISTAKEN-GQA 237

Query: 238 IRNI 241
             ++
Sbjct: 238 ANSL 241


>gi|323527712|ref|YP_004229865.1| flagellar basal-body rod protein FlgF [Burkholderia sp. CCGE1001]
 gi|323384714|gb|ADX56805.1| flagellar basal-body rod protein FlgF [Burkholderia sp. CCGE1001]
          Length = 252

 Score =  144 bits (363), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 54/249 (21%), Positives = 98/249 (39%), Gaps = 9/249 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI----DQKI 56
           M       ++      ++ + VA+N++N  T GFR     F  V  +  +      +   
Sbjct: 1   MDRLIYTAMSGSTQALEQQAIVANNLANASTTGFRAQLATFRAVPMSFGDGSSINDNTTR 60

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLV 115
           +FV S         G    TG  LD A+EG  W ++++   G   TR G   +  +G LV
Sbjct: 61  TFVLSSTPGADYTPGPIQQTGNPLDVAIEGPGWLSVQTADGGEAYTRAGNLHIDQNGQLV 120

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRR 172
           +A+ +  + +   V +    +  I   G    ++      A + +     V+     + R
Sbjct: 121 NATNQVVLGNGGPVSVPPGAQITIGRDGTVTALTPGDPPTAVVTIDQLKLVNPDPQTLTR 180

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            + G+       P +    V V    LE SN N +  M  MI   ++F   T L++  +K
Sbjct: 181 GDDGLFRTADGNPADADPTVAVAPASLEGSNVNPVSAMVSMITNARQFQMQTKLLESADK 240

Query: 233 SMLEAIRNI 241
           +  +A   +
Sbjct: 241 N-DQAANQL 248


>gi|205375362|ref|ZP_03228152.1| flagellar basal-body rod protein [Bacillus coahuilensis m4-4]
          Length = 270

 Score =  144 bits (363), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 55/271 (20%), Positives = 108/271 (39%), Gaps = 32/271 (11%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDID---- 53
           M        +  +A +++  T+A+N++N +T GF+  +     F E++            
Sbjct: 1   MLRGLYTAASGMIAQQRKTETLANNLANANTPGFKADQTSVRSFPEMLLMSVGQGTLPNQ 60

Query: 54  -------------QKISFVASGKEYLSKEVGSFISTGTELDFALE-------GDAWFALE 93
                           + V   +       G    TG + D  L        G   + ++
Sbjct: 61  QRSTIPQLNSLQTSISTGVYVQELTPLLSQGDLFETGMKTDIGLYDINVPQGGTVLYTVQ 120

Query: 94  SPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK 153
              G+  TR+G   +  +GSLV+++G Y +    +    I   +E F V ++GEI Q G+
Sbjct: 121 GENGVSYTRNGNLTLDGNGSLVTSNGYYVLDTNGN---TITLGNEDFTVNDQGEIIQNGQ 177

Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVK--RGFLEDSNANSMYEMG 211
            +A +G+     +    +        +       ++ G+  +  +GFLE+SN N    M 
Sbjct: 178 GVAKLGVAYAADASTLRKIGTDLYESDGQLQNAYNVEGLQFQTVQGFLENSNVNESQTMT 237

Query: 212 QMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            M+   + F +   L+   +KS+ +A+  I 
Sbjct: 238 DMMTAYRSFEANQKLLQAYDKSLDKAVNEIG 268


>gi|157961172|ref|YP_001501206.1| flagellar basal body rod protein FlgF [Shewanella pealeana ATCC
           700345]
 gi|157846172|gb|ABV86671.1| flagellar basal-body rod protein FlgF [Shewanella pealeana ATCC
           700345]
          Length = 247

 Score =  144 bits (363), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 45/238 (18%), Positives = 94/238 (39%), Gaps = 7/238 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + ++        L+  A+N++N +T GF++   +   +      +      F  
Sbjct: 1   MDKLLYVAMSGAKQNMNSLAVSANNLANANTDGFKSSLAQARSM--QAFGEGLPTRVFSM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119
           +     +   G   +TG +LD A++GD W A+++  G    TR G  +  + G L +  G
Sbjct: 59  TETPSANFASGPIKTTGRDLDIAVKGDGWIAVQAENGGEAYTRSGSLRFDNSGVLRNDKG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS----VDMSQGFVRRENS 175
              + D   + + +P +    +      +   G     +   +    V+     + R   
Sbjct: 119 TAVMGDNGPIVLPLPIEKVEISQDGIVSVRPSGATAEVIEEVARIKLVNPGNQNLMRGED 178

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           G+   +          V +  G +E SN N+++EM  MI L ++F     ++   E++
Sbjct: 179 GLFRLMSGENAPADPSVGLLSGAVEGSNVNAVHEMVSMIDLQRQFEMQVKMMKTAEEN 236


>gi|94312670|ref|YP_585879.1| flagellar basal body proximal rod protein [Cupriavidus
           metallidurans CH34]
 gi|93356522|gb|ABF10610.1| flagellar basal body proximal rod protein [Cupriavidus
           metallidurans CH34]
          Length = 247

 Score =  144 bits (363), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 56/245 (22%), Positives = 96/245 (39%), Gaps = 13/245 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       L+    +  + + V++N++N  T  F+     +  V   +     Q  +F  
Sbjct: 1   MDRMIYTALSGAKQILDQQAAVSNNLANASTTAFKAQVNMYRAV--PVVGQETQTRAFTL 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +       + G    TG  LD AL+G+ W A++ P      TR G  +V+ DG L ++ G
Sbjct: 59  ASTPGADMKAGPLSYTGRNLDVALQGNGWLAVQMPDGSEAYTRAGSLQVSPDGQLQTSLG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV-------DMSQGFVRR 172
              + D   + I         ++G  G ++ +G   A  GL  V          +G  R 
Sbjct: 119 LPVMGDGGPIGI---PPGSTVSIGTDGTVTARGPGEAANGLAQVGKLRVVTPPPEGLARG 175

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
           ++          PL+    V V  G LE SN N +  M +MI   ++F     +I   + 
Sbjct: 176 DDGYFRLRPGVDPLQQDPNVRVISGALEGSNVNPVESMVEMIANARRFEMQMKMITGADS 235

Query: 233 SMLEA 237
           +   A
Sbjct: 236 NDQRA 240


>gi|28211309|ref|NP_782253.1| flagellar basal body rod protein FlgG [Clostridium tetani E88]
 gi|28203749|gb|AAO36190.1| flagellar basal-body rod protein flgG [Clostridium tetani E88]
          Length = 285

 Score =  144 bits (363), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 51/286 (17%), Positives = 103/286 (36%), Gaps = 47/286 (16%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ------ 54
           M      G +A  A +++L  +++N++N +T G++   V F +++    +          
Sbjct: 1   MLRVLWSGRSAMYAQQEKLDAISNNIANVNTEGYKRQDVSFQDLMNETLDRRGYPVNEEG 60

Query: 55  -----KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109
                  + V +G        G+  +TG+  DFA++G+ +F + S       R G F + 
Sbjct: 61  NRNLIHGTGVKTGPWIRDNTQGTLNNTGSSTDFAIDGNGYFKVFSNDKEYYIRAGNFNLD 120

Query: 110 DDGSLVSASGKYPVLD---------------------------------MASVPIQIPQK 136
           + G+LV  +G    +D                                     P+     
Sbjct: 121 NKGNLVDKNGNILEIDRNIENIIDEDEEYDFDDDYYDDYEDYDDDFGEVQRRTPLIKDNF 180

Query: 137 DEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKR 196
               +     + ++K ++I  + +Y       F+   ++   P     P    S   V +
Sbjct: 181 YVEKDGRVYLKDAKKPRLIGKINVYDAVGENAFISVSDNLYKPVQGVNPEAVNSD--VLQ 238

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G++E SN     EM  MI   + F   +  +   ++ M   I N+ 
Sbjct: 239 GYVERSNVRMEKEMSDMIVSQRAFEFSSRAVKAADE-MWGMINNLR 283


>gi|77359723|ref|YP_339298.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Pseudoalteromonas haloplanktis TAC125]
 gi|76874634|emb|CAI85855.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Pseudoalteromonas haloplanktis TAC125]
          Length = 247

 Score =  144 bits (363), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 49/241 (20%), Positives = 96/241 (39%), Gaps = 7/241 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     I  +        L+  A+N++N +T GF+    +   +      +      F  
Sbjct: 1   MDKMVYIAASGAKQSLMGLALKANNLANANTTGFKADFAQARSM--QAFGEGLPSRVFSM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
             +   +   G    TG ELD A+  +AW +++        T+ G   +T +G LV++ G
Sbjct: 59  EERPGSNMTSGGIQQTGRELDIAMSDNAWLSVQDASGNEAYTKVGTLNITAEGMLVTSGG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS----VDMSQGFVRRENS 175
           +  + +   + + +P +   F+     ++  +G     +        V+ +   + + N 
Sbjct: 119 RQVIGEGGPIILPVPIEKIEFSKDGAIQVRPQGAPANFLEEVDRLKVVEANNSTLEKGND 178

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
           G+    P   +E  + V V  G LE SN N ++EM  MI   ++F     L+   E+   
Sbjct: 179 GLFRPKPNQTVETSANVQVISGALEMSNVNPVHEMVDMISHQRQFELQVKLMKTAEEIDQ 238

Query: 236 E 236
            
Sbjct: 239 S 239


>gi|300854230|ref|YP_003779214.1| flagellar basal-body rod protein [Clostridium ljungdahlii DSM
           13528]
 gi|300434345|gb|ADK14112.1| flagellar basal-body rod protein [Clostridium ljungdahlii DSM
           13528]
          Length = 255

 Score =  144 bits (363), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 47/256 (18%), Positives = 96/256 (37%), Gaps = 21/256 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGA---------- 47
           M  SF   ++  +  E +   + +N++N +TVGF+   +    F++++            
Sbjct: 1   MIRSFYSAVSGMITQEAKQDVITNNLANANTVGFKQDDLRVKSFNDMLLQNYDKTEGNRS 60

Query: 48  IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRF 106
           ++N I                  GS  STG   DFA++G  +F +         TRDG F
Sbjct: 61  VRNIIGSISLGSGIDSVKTGFTQGSIDSTGVSTDFAIDGRGFFTVRGQDGKEYYTRDGHF 120

Query: 107 KVTDDGSLVSASGKYP--VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
            V  +G LV+ +G              ++   +      + G I+  G     +     +
Sbjct: 121 HVNTNGVLVNDAGDSVLARNTRTGALGEMNVGNGNMTSDDHGNINIDGTPSYKLYTVDFN 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224
                 +  ++  +           + V V++  LE SN N +  M Q++   + F +  
Sbjct: 181 DYNTLTKVGDNLYTGTNAAE-----TNVVVRQKSLEKSNVNIVNTMSQLMTTMRSFETDQ 235

Query: 225 TLIDENEKSMLEAIRN 240
             +   ++++ + I  
Sbjct: 236 KAVQSIDETLEKLINE 251


>gi|30248323|ref|NP_840393.1| flagellar basal body rod protein FlgF [Nitrosomonas europaea ATCC
           19718]
 gi|30138209|emb|CAD84217.1| Flagella basal body rod protein [Nitrosomonas europaea ATCC 19718]
          Length = 247

 Score =  144 bits (363), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 51/241 (21%), Positives = 90/241 (37%), Gaps = 6/241 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       +   L    + +TV+ N++N  T GFR     F  V   +  +     +FV 
Sbjct: 1   MDRLIYTAMTGALHTMTQQATVSHNLANASTTGFRAQTDAFRAV--PVYGESLPTRAFVL 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
                     G+   T   LD A++G  W A++        TR G  K+  +G L +  G
Sbjct: 59  DSTTGADFTPGAIQQTNRPLDVAVQGSGWIAVQLENGEEAYTRHGNLKMDANGILQTQQG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176
                +   + I    +  I   G    +    ++ A   +     VD     + R   G
Sbjct: 119 FNIKGESGPITIPPDSRIAIGKDGSVSVLPSDSRMTAVSIVGRIKLVDPPAEQLVRGEDG 178

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           +              V +  G LE SN N + EM +MI L ++F+    +++  +++  +
Sbjct: 179 LFRLKEGGQAPVSEKVALIDGALESSNVNVISEMVKMITLARQFDMQMKMLENAQQNAQQ 238

Query: 237 A 237
           A
Sbjct: 239 A 239


>gi|323498419|ref|ZP_08103415.1| flagellar basal body rod protein FlgF [Vibrio sinaloensis DSM
           21326]
 gi|323316492|gb|EGA69507.1| flagellar basal body rod protein FlgF [Vibrio sinaloensis DSM
           21326]
          Length = 249

 Score =  144 bits (362), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 49/240 (20%), Positives = 92/240 (38%), Gaps = 9/240 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  + ++      Q L   A+N++N  T GFR    +   +      +      F  
Sbjct: 1   MDRALFLAMSGAKQNMQALQLRANNLANVSTTGFRADLAQARSM--QAYGEGLPSRVFSM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASG 119
           + +   + + GS I+TG +LD  +EG+ W A+ +      LTR+G  KV  +G LVS +G
Sbjct: 59  TERPGHNFQQGSVITTGRDLDVTIEGNGWIAVLDKSGKEGLTRNGNLKVDVNGLLVSGNG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGE------KGEISQKGKVIATMGLYSVDMSQGFVRRE 173
              + +            ++    +                +      +   +Q   +  
Sbjct: 119 NLVIGETGGPITLPIPLSKVEIGTDGTISVVPQGAPADAIEVVDRIKLTNTNNQSLFKDV 178

Query: 174 NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           N       P    E  + V +  G +E SN N++ EM  +I L ++F     ++   E+ 
Sbjct: 179 NGLFRAKDPNAAYEADADVKLLTGAIEGSNVNAIGEMTSLIDLQRQFEMQVKMMSTAEEM 238


>gi|300311353|ref|YP_003775445.1| flagellar basal body rod protein FlgF [Herbaspirillum seropedicae
           SmR1]
 gi|300074138|gb|ADJ63537.1| flagellar basal body rod FlgF protein [Herbaspirillum seropedicae
           SmR1]
          Length = 245

 Score =  144 bits (362), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 7/245 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       ++      ++ +T ++N++N  T GFR     F      +  D     +FV 
Sbjct: 1   MDRLVYTAMSGAKHTLEQQATASNNLANATTTGFRAQLNTFRA--APVVGDGLPTRTFVV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119
                     G    TG  LD A++G  W A+++  G    TR+G FK+ ++G L + SG
Sbjct: 59  DSTAGNDFSQGPIQDTGRALDVAIQGRGWIAVQTADGGEAYTRNGSFKINENGILQTQSG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176
           +  + D   + I       I   G    I   G   A   L     V+  +  ++R + G
Sbjct: 119 QTVLGDGGPITIPPDATVAIAADGTVSAIPTNGIPNAVNVLGRIKLVNPDEKNMKRGDDG 178

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           +   I     +  + V +  G LE SN N +  M  MI+L+++F     +I   E    +
Sbjct: 179 LFRTITG-AAQPDANVRLASGALEGSNVNVVEAMVNMINLSRQFEMNMKMIQTAESDATK 237

Query: 237 AIRNI 241
           A   +
Sbjct: 238 ATSIL 242


>gi|114762163|ref|ZP_01441631.1| putative flagellar basal body rod protein [Pelagibaca bermudensis
           HTCC2601]
 gi|114545187|gb|EAU48190.1| putative flagellar basal body rod protein [Roseovarius sp.
           HTCC2601]
          Length = 237

 Score =  144 bits (362), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 65/236 (27%), Positives = 109/236 (46%), Gaps = 6/236 (2%)

Query: 6   NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65
              L+ Q  L + +  VA+N++N  T G+R   V FSE V     D    ++  AS    
Sbjct: 6   YTTLSRQQGLMREMRMVANNIANMATTGYRQQGVVFSEYVRQTDRDGS--VAMTASHVRN 63

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125
            S   GS   TG +LD A+EG+ +F +++P G  LTR G F  +  G LV+  G + VLD
Sbjct: 64  TSFAQGSLTRTGGQLDLAIEGEGFFLVQTPAGERLTRAGNFASSSAGDLVTQDG-HLVLD 122

Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185
               P+ IP       +G+ G +S  G  I  +G+         VR             P
Sbjct: 123 SGGAPVFIPPDATDLAIGQDGTLSSNGAPIGQIGIVQPLDPGALVREGGVLFRAEAGYDP 182

Query: 186 LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
            E      V++GF+E +N + + ++ +MI + + +      +   ++ +  AI+++
Sbjct: 183 AEA---PRVRQGFVESANVDPILQIARMIEVQRAYEMGQNFLQREDERVRAAIKSM 235


>gi|329901231|ref|ZP_08272756.1| Flagellar basal-body rod protein flgF [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327549163|gb|EGF33755.1| Flagellar basal-body rod protein flgF [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 245

 Score =  144 bits (362), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 60/246 (24%), Positives = 101/246 (41%), Gaps = 6/246 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       +     + ++ ST A+N++N  T GFR     F  V   ++       +FV 
Sbjct: 1   MDRMIYTAMTGAKHVMEQQSTTANNLANATTTGFRAQLDTFRAV--PVQGPGLATRAFVV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
                     G+   TG  LD A++G  W A++ P      TR G  KV ++G L +  G
Sbjct: 59  DSTVGADFSQGALQQTGRALDVAIQGKGWLAVDMPDGTEAYTRHGSLKVNENGLLQTQGG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEI---SQKGKVIATMGLYSVDMSQGFVRRENSG 176
              V D   + I       I   G    +   S+ G+ +    +  V+  +  + R +  
Sbjct: 119 LNIVGDSGPITIPPDVNVTIGKDGTVSSVESGSKPGQAVIIGRIKLVNPPEETMTRGDDT 178

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           +     P  +E    VT+  G LE SN N +  M  MI L+++F    +L+   E +  +
Sbjct: 179 LFRVKTPGGVEADPNVTLAEGALESSNVNVVDAMVNMISLSRQFEMHMSLLKNAETNSTK 238

Query: 237 AIRNIA 242
           A + +A
Sbjct: 239 AAQILA 244


>gi|253996318|ref|YP_003048382.1| flagellar basal-body rod protein FlgF [Methylotenera mobilis JLW8]
 gi|253982997|gb|ACT47855.1| flagellar basal-body rod protein FlgF [Methylotenera mobilis JLW8]
          Length = 246

 Score =  144 bits (362), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 54/245 (22%), Positives = 99/245 (40%), Gaps = 6/245 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       +     + ++ +T + N++N  + GF++    F  V   + +      +FV 
Sbjct: 1   MDRMIYTAMTGAKHILEKQATTSHNLANATSTGFKSQIDSFRAV--PVLSTGLPTRAFVV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
                     G+  ST   LD A++GD W A++        TR+G  K + +G L +A+G
Sbjct: 59  DSTSGSDFNSGAIQSTNRNLDIAVKGDGWLAVQRADGSEAYTRNGSLKTSPNGLLQTANG 118

Query: 120 KYPVLDMAS---VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
              + D       P       +   V     ++  G       +  V+  Q  + R + G
Sbjct: 119 LTIMGDGGPITIPPDVAVSIGKDGTVSTVNNLTLPGPSNIIGRIKLVNPPQANLVRADDG 178

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           +       P    + V+V +G LE SN N +  M  MI L+++F +   LI   E +  +
Sbjct: 179 LFTTKDGNPATADANVSVVQGALESSNVNVVDAMVTMISLSRQFETQMKLIQTAENNANK 238

Query: 237 AIRNI 241
           A + +
Sbjct: 239 ASQLL 243


>gi|330818584|ref|YP_004362289.1| flagellar basal body rod protein FlgF [Burkholderia gladioli BSR3]
 gi|327370977|gb|AEA62333.1| flagellar basal body rod protein FlgF [Burkholderia gladioli BSR3]
          Length = 250

 Score =  144 bits (362), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 55/247 (22%), Positives = 90/247 (36%), Gaps = 7/247 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK--NDIDQKISF 58
           M       +       ++ S +A+N++N  T GFR     +  V       ++     +F
Sbjct: 1   MDRLIYTAMTGAGQALEQQSVIANNLANASTTGFRAQLATYRAVPMNFGEASNPTTTRTF 60

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSA 117
           V           G    TG  LD A++G  W ++ +P      TR G   V ++G LV+A
Sbjct: 61  VLDSTPGADYTPGPITRTGNPLDVAVQGPGWLSVLAPDGSEAYTRAGNLHVDENGQLVNA 120

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEIS---QKGKVIATMGLYSVDMSQGFVRREN 174
           S    V     + I    K  I   G    ++       +     L  V+     + R +
Sbjct: 121 SNLPVVGGGGPIAIPPNAKVTIGPDGTVSVLAAGDPPSAIAMIDQLKLVNPDPSTITRGD 180

Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
            G+       P +    VTV    LE SN N +  M  M+   + F   T LI   +++ 
Sbjct: 181 DGLFRTTDGNPADADPNVTVAAESLEGSNVNPVAAMVSMLDNARAFQLHTKLISTADQN- 239

Query: 235 LEAIRNI 241
            +    I
Sbjct: 240 EQTANQI 246


>gi|91785633|ref|YP_560839.1| flagellar basal body rod protein FlgF [Burkholderia xenovorans
           LB400]
 gi|91689587|gb|ABE32787.1| flgF; flagellar basal-body rod protein [Burkholderia xenovorans
           LB400]
          Length = 252

 Score =  144 bits (362), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 54/249 (21%), Positives = 99/249 (39%), Gaps = 9/249 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI----DQKI 56
           M       ++      ++ + VA+N++N  T GFR     F  V  +  +      +   
Sbjct: 1   MDRLIYTAMSGSTQALEQQAIVANNLANASTTGFRAQLATFRAVPMSFGDGSSINDNTTR 60

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLV 115
           +FV S         G    TG  LD A++G  W A+++  G    TR G   + ++G LV
Sbjct: 61  TFVLSSTPGADYTPGPIQQTGNPLDVAIQGPGWLAVQTADGGEAYTRAGNLHIDENGQLV 120

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRR 172
           +A+ +  + +   V +    +  I   G    ++      A + +     V+     + R
Sbjct: 121 NATNQVVLGNGGPVSVPPGAEITIGKDGTVSALTPGDPPTAVVTVDQLKLVNPDPQTMTR 180

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            + G+       P +    VT+    LE SN N +  M  MI   ++F   T L++  +K
Sbjct: 181 GDDGLFRTGDGNPADADPTVTLAPASLEGSNVNPVSAMVSMITNARQFQMQTKLLESADK 240

Query: 233 SMLEAIRNI 241
           +   A   +
Sbjct: 241 NDQSA-NQL 248


>gi|15895408|ref|NP_348757.1| flagellar basal body rod protein FlgG [Clostridium acetobutylicum
           ATCC 824]
 gi|15025131|gb|AAK80097.1|AE007715_2 Flagellar basal body rod protein [Clostridium acetobutylicum ATCC
           824]
 gi|325509554|gb|ADZ21190.1| flagellar basal body rod protein FlgG [Clostridium acetobutylicum
           EA 2018]
          Length = 256

 Score =  144 bits (362), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 47/256 (18%), Positives = 105/256 (41%), Gaps = 17/256 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M      G++   A +++L ++++N++N+ T G+++  V FS+++    N          
Sbjct: 1   MLRIMWNGVSGMAAEQEKLDSISNNLANSSTTGYKSETVGFSDLLYETLNRKGYPVTNDD 60

Query: 56  -----ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVT 109
                 S V + +   +   GS   + ++   A++G  +F + +P       R G F V 
Sbjct: 61  NNRYTGSGVKANEWIRNNAQGSLTPSDSKTALAIDGSGYFKVTTPDGTEAYERAGSFTVN 120

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV----IATMGLYSVDM 165
            +G +V  +G Y  +D +  P  +        V + G IS +       +  + +Y V  
Sbjct: 121 ANGRIVDPNGNYLNIDYSVDPSTVKFTASNVAVAQDGTISIQNGQTTTNVGKINIYDVTG 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225
           +   +    S          +   +   + + +LE+SN +   EM  MI   + +   + 
Sbjct: 181 NDSMISVGKSL-FVPKAGAQMFVNNKSVIYQNYLENSNVDLGTEMTDMIVAQRAYQINSK 239

Query: 226 LIDENEKSMLEAIRNI 241
            ++  + +M   + N+
Sbjct: 240 SLETGD-NMWSIVNNM 254


>gi|312880336|ref|ZP_07740136.1| fagellar hook-basal body protein [Aminomonas paucivorans DSM 12260]
 gi|310783627|gb|EFQ24025.1| fagellar hook-basal body protein [Aminomonas paucivorans DSM 12260]
          Length = 264

 Score =  143 bits (361), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 53/259 (20%), Positives = 89/259 (34%), Gaps = 25/259 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDIDQKIS 57
           M      G +A L  E+ L  V +N++N DT GFR        F EV+        ++  
Sbjct: 1   MFRGIYSGTSAMLVQEKMLDVVGNNLANVDTSGFRARIAVNKSFPEVLMDRVERYPEEGI 60

Query: 58  FVASGKEY------------------LSKEVGSFISTGTELDFALEGDAWFALESPR-GI 98
                                     +    G    T   LD AL+ + +F ++      
Sbjct: 61  GPKRFNPRGRVPIGTLSLANVLHETAMRTAPGVMQVTNAPLDVALQEEGFFVVQDGAGNT 120

Query: 99  ILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158
             TR G F+  D G LV+  G     D  +V I    +  +    ++G++   G V   +
Sbjct: 121 FYTRSGHFQKNDQGQLVTHDGMLVQGDGGAVEIGDAVRYSL---NDRGQLLVNGAVAGQL 177

Query: 159 GLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
            +              S ++        E++    V  GFLE SN N + EM +MI   +
Sbjct: 178 QVVRFPTPTRMRHVGKSLLAETPDSGAPEEVEQPKVAVGFLERSNVNVVEEMSRMIEANR 237

Query: 219 KFNSITTLIDENEKSMLEA 237
            +      +   ++     
Sbjct: 238 AYEVAAKTVTIQDELTSRL 256


>gi|150020363|ref|YP_001305717.1| hypothetical protein Tmel_0465 [Thermosipho melanesiensis BI429]
 gi|149792884|gb|ABR30332.1| protein of unknown function DUF1078 domain protein [Thermosipho
           melanesiensis BI429]
          Length = 233

 Score =  143 bits (361), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 47/257 (18%), Positives = 99/257 (38%), Gaps = 40/257 (15%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS--- 57
           M     +     LA   +L T+++N+SN DT G+++  + F           +       
Sbjct: 1   MYRGIYLASMGMLADITKLDTLSNNISNVDTAGYKSDSLAFKAYFEKQLYSFNPMPQKEE 60

Query: 58  -----------FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106
                       +   +   +   G+   TG  LDFA++G  +F +E+    + TR G F
Sbjct: 61  VEVKKIGSFEQALILDQVKTNYSQGTLEYTGHSLDFAIDGKGFFVVENAGKRMYTRAGNF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           K  ++G L++  G Y +                       +I   G V+  + + ++   
Sbjct: 121 KANEEGYLITPEGYYVLGKNDQ------------------KIKLDGNVLEKLLVVALKNP 162

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
           +        G                 + +G++E SN N + EM +MI  T+ + +++  
Sbjct: 163 RKVGYTFFKGEEVRKENF--------RILQGYVEKSNVNIVREMVKMIEATRHYETLSKA 214

Query: 227 IDENEKSMLEAIRNIAS 243
           +  +++ + ++I +  S
Sbjct: 215 VTVHDELLNKSINSAGS 231


>gi|254785373|ref|YP_003072802.1| flagellar basal body rod protein FlgF [Teredinibacter turnerae
           T7901]
 gi|237683950|gb|ACR11214.1| flagellar basal-body rod protein FlgF [Teredinibacter turnerae
           T7901]
          Length = 250

 Score =  143 bits (361), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 95/238 (39%), Gaps = 7/238 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  I ++      +  +  A+N++N +T GF+    +   +          +   + 
Sbjct: 1   MDKALYIAMSGAKHNMRAQTVHANNLANVNTTGFKADFARARSMPIYFGEGHPTRAYALE 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
                     G  + TG +LD A+EGD + A++SP      TR G   +   G L + +G
Sbjct: 61  EIPAT-DFRQGPLVETGRDLDVAVEGDGFIAVQSPDGSEAYTRAGSLFIDALGMLRTGNG 119

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176
              + +   + I   +K EI   G    I+    V A + +     V+     ++R   G
Sbjct: 120 LPVLGNGGPIAIPAAEKVEISGDGSITVIALGQGVDAPVQVDRIKLVNPPTDTIQRGIDG 179

Query: 177 --ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
                +     L     V +  GF+E SN N++ E+  ++ L +++     ++   ++
Sbjct: 180 LIHLLDDAQGELPADGNVRIISGFVEGSNVNAVNELTSVMSLARQYEMQVKIMQTVKE 237


>gi|332284020|ref|YP_004415931.1| flagellar basal body rod protein FlgF [Pusillimonas sp. T7-7]
 gi|330427973|gb|AEC19307.1| flagellar basal body rod protein FlgF [Pusillimonas sp. T7-7]
          Length = 248

 Score =  143 bits (361), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 47/241 (19%), Positives = 84/241 (34%), Gaps = 4/241 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M             + ++ + +++N++N +T GFR     +  V                
Sbjct: 1   MDRIIYTAAGGAARVLEQQAVISNNLANVNTAGFREQMAIYRSVPVVGAAPSLPTRVSTV 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           +         G  + TG  LD A+ GD WF++++P+G   TR G F V +   LV+  G 
Sbjct: 61  TSTPSSHMGQGVMVETGHALDAAITGDGWFSVQTPQGEAYTRAGEFAVNEQSLLVNLQGY 120

Query: 121 YPV----LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
             +      +               +   G   +   +     L  V+     + R   G
Sbjct: 121 PVLSADGAPIEIPERGAVTFSGDGQISALGAGDRPNDIQLIGQLKLVNPQAADLVRGGDG 180

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           +       P +    V +  GF+E SN N    M  MI   ++F     +I +   +   
Sbjct: 181 LFRAANGQPAQADPEVRMIAGFVEKSNVNPAEAMVGMIANARRFEMQMKVIQDASSNAER 240

Query: 237 A 237
           A
Sbjct: 241 A 241


>gi|37360908|dbj|BAC98362.1| flagellar basal-body rod protein [Burkholderia glumae]
          Length = 251

 Score =  143 bits (361), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 40/248 (16%), Positives = 85/248 (34%), Gaps = 20/248 (8%)

Query: 12  QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------------QKISF 58
             A + ++  +++N++N  T GF+  +  F +++                     Q  + 
Sbjct: 1   MNAQQAQMDVISNNLANVSTNGFKGSRAVFEDLLYQTVRQPGANSTQQTELPSGLQLGTG 60

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSA 117
           V           G+   TG   D A+ G  +F +  P      TRDG F+  + G LV++
Sbjct: 61  VQQVATERLYTQGNLQQTGNSRDVAINGQGFFQVLMPDGTTAYTRDGSFQANNQGQLVTS 120

Query: 118 SGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           +G   +  +                V      S     I +M L +    +G      + 
Sbjct: 121 AGYQVLPAITVPQNAQSLTIGADGVVTVTQPGSTNAVQIGSMQLATFINPEGLNALGQNL 180

Query: 177 ISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
            +                   ++ +G++E SN N   E+  MI   + +   +  +  ++
Sbjct: 181 FAETTSSGAPNVTTPGLNGAGSLNQGYVESSNVNVXQELVNMIQTQRAYEINSKAVTTSD 240

Query: 232 KSMLEAIR 239
           + +    +
Sbjct: 241 QMLQTVTQ 248


>gi|296531728|ref|ZP_06894556.1| flagellar basal-body rod protein FlgF [Roseomonas cervicalis ATCC
           49957]
 gi|296267944|gb|EFH13743.1| flagellar basal-body rod protein FlgF [Roseomonas cervicalis ATCC
           49957]
          Length = 252

 Score =  143 bits (361), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 59/250 (23%), Positives = 111/250 (44%), Gaps = 9/250 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M +   + L+ QLAL Q++  VA+N++N  T G+R  +  F   V  +     ++I+FV 
Sbjct: 1   MDSPSTVSLSGQLALRQQMDVVANNLANATTSGYRGDRTLFQSYVTRLAVP-GREIAFVQ 59

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESP-RGIILTRDGRFKVTDDGSLVSASG 119
               Y+    G   STG  LD A+EG+A+F ++ P      TRDGRFK+  D  L  + G
Sbjct: 60  DRATYIENRQGPIGSTGNPLDLAIEGEAFFGVQRPGGAPGYTRDGRFKIRPDNVLADSQG 119

Query: 120 KYPVLDMASV---PIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           +  + +  +    P +I   +   N         + +    + LY+    +G  +  +  
Sbjct: 120 RAVLGEGGAPITLPERISAIEIRANGNILVTSEGRVEQAGCIALYAGGDMRGLRKSGDGL 179

Query: 177 ISPNI----PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
                    P  P    + V + +G LE S   ++ E+  +  + + + S+  +I +++ 
Sbjct: 180 FEIPAESVQPVDPDAPGTRVRLAQGALEGSTVQTVSELANLALVQRAYESMQRIISDDDS 239

Query: 233 SMLEAIRNIA 242
            +   I  + 
Sbjct: 240 RIRRLIETVG 249


>gi|332531619|ref|ZP_08407516.1| flagellar basal-body rod protein FlgF [Hylemonella gracilis ATCC
           19624]
 gi|332038982|gb|EGI75411.1| flagellar basal-body rod protein FlgF [Hylemonella gracilis ATCC
           19624]
          Length = 246

 Score =  143 bits (361), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 50/244 (20%), Positives = 92/244 (37%), Gaps = 5/244 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       +    A + R S +++N++N  T GFR     +  V   ++ +      F  
Sbjct: 1   MDRIIYTAMTGANAAQHRQSVLSNNLANVSTNGFRAELSTYRAV--PLRGEGATTRVFAL 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119
                     G  + TG +LD   +  +WFA++    G   TR+G F+V+  G L +++G
Sbjct: 59  EATAGQRDAPGPSMRTGRDLDAMPQQSSWFAVQGLDGGEAYTRNGSFEVSPQGVLQTSNG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS--QGFVRRENSGI 177
              + D  S                       G+   T+G   +     Q  ++R + G+
Sbjct: 119 LPLLSDGGSPITVPENAVVSLGSDGTISAQSAGQPPTTLGRIKLATPTEQDRLKRGDDGL 178

Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
              +    L   +   +  G LE SN N++  M  MI   ++F     ++   E     A
Sbjct: 179 FRPVSGGQLPSDTNARMDVGVLEGSNVNAVETMVGMIQTARQFEQQMRMLQTAESDDRSA 238

Query: 238 IRNI 241
            + +
Sbjct: 239 AKLL 242


>gi|268317780|ref|YP_003291499.1| flagellar basal body rod protein [Rhodothermus marinus DSM 4252]
 gi|262335314|gb|ACY49111.1| flagellar basal body rod protein [Rhodothermus marinus DSM 4252]
          Length = 242

 Score =  143 bits (361), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 44/244 (18%), Positives = 101/244 (41%), Gaps = 6/244 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M        A+     ++   +A+N++N +T G++  +  F E +     D ++      
Sbjct: 1   MLLRLQNAAASMTEAIRQQERLANNLANVNTAGYKQER-FFVEALNERL-DAERSPRSDR 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG--IILTRDGRFKVTDDGSLVSAS 118
              ++     G+   TG+ LD A+EGD +F +          TR G+F++  +G L +  
Sbjct: 59  RLTQWNDLTQGALEHTGSPLDVAIEGDGFFVVTDAATGATFYTRAGQFRLDGEGYLRTID 118

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178
           G     +   + +   +++   ++ + G +    + +A + +      +   R E +  +
Sbjct: 119 GLLVEGEDGPIQLLPHERNRTLSISQDGVLRADEREVARLRIVRFARPEALQRVEGARFA 178

Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
                     +    ++ GFLE SN N +  M +MI    +F +   +I   ++ + +  
Sbjct: 179 ATDQE--PLPVETPHLRPGFLESSNVNPVLAMTEMIEHFHRFETQQKVIQTTDQLLGQIT 236

Query: 239 RNIA 242
           R++ 
Sbjct: 237 RDLG 240


>gi|169827129|ref|YP_001697287.1| flagellar basal-body rod protein flgG [Lysinibacillus sphaericus
           C3-41]
 gi|168991617|gb|ACA39157.1| Flagellar basal-body rod protein flgG (Distal rod protein)
           [Lysinibacillus sphaericus C3-41]
          Length = 322

 Score =  143 bits (361), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 54/319 (16%), Positives = 96/319 (30%), Gaps = 80/319 (25%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-------- 52
           M  S   G++     + +L  + +N++N +TVGF+  +V F +++   +           
Sbjct: 1   MLRSMYSGISGLKNFQTKLDVIGNNIANVNTVGFKKGRVLFKDLMSQTQAGASAATATRG 60

Query: 53  ----DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP------------- 95
                Q                GS   TG  LD  +EGD +F +                
Sbjct: 61  GVNPQQVGLGSQLAAIDTIHGGGSLQGTGRGLDLGIEGDGFFMVADANGAPDPDSGFIGE 120

Query: 96  ---RGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEIS--- 149
                 + TR+G F +  +G LV+A GKY V   A   I +   D+  N  +    S   
Sbjct: 121 EGFNNTLFTRNGVFYMDSNGYLVNADGKYLVGVSAGEDIVMEADDDGINPDDAPIASGDE 180

Query: 150 --------------------------------------------QKGKVIATMGLYSVDM 165
                                                          K    + +     
Sbjct: 181 GANLFDDDGVLDPEDGEVGPIRIPTTAKEISIGANGTIEYVDLNGNRKWAGQLIMAKFPN 240

Query: 166 SQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
           + G  +   +                       V  G +E SN +   E  +MI   + F
Sbjct: 241 AGGLAKVGGNYYQQTANSGAAYAQVATVAGMGKVVPGTVEMSNVDLSEEFTEMIVAQRGF 300

Query: 221 NSITTLIDENEKSMLEAIR 239
            + T +I  +++ + E + 
Sbjct: 301 QANTRIITTSDEVLQELVN 319


>gi|144897831|emb|CAM74695.1| Flagellar basal body rod protein:Protein of unknown function
           DUF1078 [Magnetospirillum gryphiswaldense MSR-1]
          Length = 273

 Score =  143 bits (361), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 52/240 (21%), Positives = 118/240 (49%), Gaps = 7/240 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND---IDQKIS 57
           M+ +  I L+ Q AL ++L  +A NM+N +T G+++ ++ F E +   ++      +K+S
Sbjct: 30  MENTSYIALSRQNALWRQLDVIAGNMANANTPGYKSEQMMFREYLMDTRSSDRATGKKLS 89

Query: 58  FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSA 117
           +V           G+F  T   LD AL  D +F +E+  G+  TR+G F++ + G LV++
Sbjct: 90  YVQDIGLLRDTREGAFTKTDNPLDLALHNDGFFQVETEAGMRYTRNGHFRLDEGGMLVNS 149

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177
            G   +    +  I +   +    V   G +S +  ++A + +      Q   +  +S  
Sbjct: 150 QGAAVMDTGDNPII-LAPNETRITVTPDGSVSTENGIVAKIKVVRFANDQDMRKIGDSLY 208

Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                P   + ++  ++ +G +E+SN   + E+ +M  + +++ ++  ++++  +  ++A
Sbjct: 209 ETTQDP---DTIARPSIVQGMMEESNVQPVVEITKMTEVLRQYQALQNILEKEHERQMKA 265


>gi|220924579|ref|YP_002499881.1| flagellar basal body rod protein FlgF [Methylobacterium nodulans
           ORS 2060]
 gi|219949186|gb|ACL59578.1| flagellar basal body rod protein [Methylobacterium nodulans ORS
           2060]
          Length = 248

 Score =  143 bits (361), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 65/247 (26%), Positives = 115/247 (46%), Gaps = 9/247 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA-----IKNDIDQK 55
           MQ +  IGL+AQ+AL + L  +A+NM+N  T GF+    +F E +            D++
Sbjct: 1   MQNAQLIGLSAQVALGRELEVIANNMANVSTTGFKARTTRFQEYLMPKASAETFRRPDRR 60

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115
           +S+V      L    G   +TG  L+ A+ GDA+FA+++P+G   TR+G F++   G LV
Sbjct: 61  LSYVIDAGTPLDLSQGPIETTGNPLNAAIRGDAFFAVQTPQGERYTRNGAFELNAQGQLV 120

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
           ++ G   + D    PIQ   ++    +G  G IS        + L      Q       +
Sbjct: 121 TSDGNLVLGD--GGPIQFNPQETGAAIGPDGTISTNQGNRGKLRLVRFSDPQALSNAGAN 178

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
             +      PL   +   V+ G +E SN + +  M +M+ + + +  ++  +   +    
Sbjct: 179 LYAATAA--PLPAGTQARVEPGAVERSNVSPVLTMTRMMEVNRIYALVSDSVSRMDALRG 236

Query: 236 EAIRNIA 242
            AI+ +A
Sbjct: 237 SAIQRLA 243


>gi|218460753|ref|ZP_03500844.1| flagellar basal body rod protein FlgG [Rhizobium etli Kim 5]
          Length = 244

 Score =  143 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 86/243 (35%), Gaps = 21/243 (8%)

Query: 20  STVADNMSNTDTVGFRTIKVKFSEVVGAIKN--------------DIDQKISFVASGKEY 65
             +A+N++N +T G +  + +F++++   +               +       V +    
Sbjct: 1   EVIANNIANINTTGSKRARAEFTDLLYQTERAKGVANRANQAVVPEGANIGLGVQTSAVR 60

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASGKYPVL 124
                G    TG +LD AL G  +F ++ +    + TR G F   D G LV+  G   + 
Sbjct: 61  NLHLQGELTQTGNDLDVALIGKGFFQIQSTDGTTLYTRAGAFNKNDQGQLVTIDGYEVLP 120

Query: 125 DMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183
            +                V  K   +    V+  + L       G     ++        
Sbjct: 121 GITIPQGSTELTISRSGEVSVKLPGATDATVLGQLTLADFVNEAGLQPIGDNLFQETAAS 180

Query: 184 TPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
                 +        +K+G+LE SN + + E+ ++I   + +   + +I   ++      
Sbjct: 181 GEAVVGNPDEEGFGYMKQGYLESSNVDPVKEITELISAQRAYEMNSKVITTADEMASIVS 240

Query: 239 RNI 241
           +N+
Sbjct: 241 KNL 243


>gi|224825165|ref|ZP_03698271.1| flagellar basal-body rod protein FlgF [Lutiella nitroferrum 2002]
 gi|224602836|gb|EEG09013.1| flagellar basal-body rod protein FlgF [Lutiella nitroferrum 2002]
          Length = 246

 Score =  143 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 50/246 (20%), Positives = 94/246 (38%), Gaps = 6/246 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + +     +  + +T + N++N  T G++  +V F  +   +  D     ++V 
Sbjct: 1   MDRMIYLAMTGAKHVMTQQATTSQNLANVHTNGYKADQVSFRAL--PVVGDGAPTRTYVV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
                     GS   TG + DFAL    +F +++       +RDG F    +G L + SG
Sbjct: 59  DNTIGHDLSQGSLQQTGNDTDFALGTPGFFTVQTADGREAYSRDGGFVADPNGMLRTRSG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG---KVIATMGLYSVDMSQGFVRRENSG 176
              + D   + +       I   G        G          L  V+  +  V +   G
Sbjct: 119 LPILGDGGPITVPTGSSVVIGPDGTVVTTPTSGADRTPQIAGQLKLVNPGERAVYKGEDG 178

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           +              V V  G LE SN N++  + QMI   ++F+    L+  ++++  +
Sbjct: 179 LFRLNAGGNATASDDVKVVSGALEGSNVNAVESLVQMISHARQFDLNVKLMQTSDQNEQK 238

Query: 237 AIRNIA 242
           A + +A
Sbjct: 239 ASQILA 244


>gi|260886210|ref|ZP_05897473.1| flagellar basal-body rod protein FlgG [Selenomonas sputigena ATCC
           35185]
 gi|330839794|ref|YP_004414374.1| flagellar hook-basal body protein [Selenomonas sputigena ATCC
           35185]
 gi|260863929|gb|EEX78429.1| flagellar basal-body rod protein FlgG [Selenomonas sputigena ATCC
           35185]
 gi|329747558|gb|AEC00915.1| flagellar hook-basal body protein [Selenomonas sputigena ATCC
           35185]
          Length = 264

 Score =  143 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 51/265 (19%), Positives = 109/265 (41%), Gaps = 27/265 (10%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51
           M     +  +  +    R   +A+N++N  + G++  +    +F+ ++    ND      
Sbjct: 1   MLRGLYVAASGMITETNRTDVIANNLANAASSGYKRDEAINQEFAPMLLKRINDNQDDAV 60

Query: 52  --------------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG 97
                         +        + +       GS  +TG  LD A+ G+ +FA+++P+G
Sbjct: 61  TSFRGFRLEQGPPRVGNLGLGAYTAEIATDHVQGSMKTTGNMLDLAVSGEGYFAIQTPQG 120

Query: 98  IILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157
           +  TRDG F    +G+LV+A G+  +   A     +        +G KGEI    + I T
Sbjct: 121 VRYTRDGSFYRQANGALVTARGQAVL--NAQNRPIMLPDSANITIGAKGEIMDGQRRIDT 178

Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217
           +     D  +  +++ ++   P     P    +   +++G LE+SN N   EM  +I+  
Sbjct: 179 LQFVQFDDRRAVLKQGDNLYRPQQGAEPQ--AATGDIQQGMLENSNVNIASEMVSLINNY 236

Query: 218 QKFNSITTLIDENEKSMLEAIRNIA 242
           + + + +  +   +    + +  + 
Sbjct: 237 RIYEAGSRALVTQDSMTDKTVNEVG 261


>gi|170748127|ref|YP_001754387.1| flagellar basal body rod protein [Methylobacterium radiotolerans
           JCM 2831]
 gi|170654649|gb|ACB23704.1| flagellar basal body rod protein [Methylobacterium radiotolerans
           JCM 2831]
          Length = 246

 Score =  143 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 84/247 (34%), Positives = 140/247 (56%), Gaps = 9/247 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           MQ+S  + L+AQ+ALEQRL+TVA N++N  TVG+R  +VKF  ++    +   + ++F  
Sbjct: 1   MQSSLYVTLSAQMALEQRLNTVAANVANLGTVGYRAEEVKFETILSQAGH---RDVAFAT 57

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
            G+ +LS++ G  I T + LD  L+GD W A+  PRG++ TRDGR +VT  G L    G 
Sbjct: 58  PGETFLSRKAGPLIKTDSPLDVGLQGDGWLAVRGPRGMVYTRDGRMQVTAAGDLQDLDG- 116

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
             +LD    P+ +  +     +G+ G +SQ    I  +G++ +D +    R     ++ +
Sbjct: 117 RAILDPGGSPLTVDPEGPPLTIGQDGIVSQGTNQIGALGVFRLDPAAKLTRVAGGAVASD 176

Query: 181 IPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
           +P  P+ D +      V V++GF E +N N + EM ++I +T+ F S    + E+E S+ 
Sbjct: 177 VPGRPILDFNQRDETTVRVQQGFQEGANVNPVMEMSRLIEITRAFQSAAAAVAESESSLQ 236

Query: 236 EAIRNIA 242
           +AIR + 
Sbjct: 237 DAIRGLG 243


>gi|89095665|ref|ZP_01168559.1| flagellar basal-body rod protein [Bacillus sp. NRRL B-14911]
 gi|89089411|gb|EAR68518.1| flagellar basal-body rod protein [Bacillus sp. NRRL B-14911]
          Length = 279

 Score =  143 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 52/280 (18%), Positives = 100/280 (35%), Gaps = 42/280 (15%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKND------ 51
           M   F    +  L+ ++R   + +NM+N++T GF+  +     F E++            
Sbjct: 1   MFRGFYTVASGMLSQQRRTEMLTNNMANSNTPGFKADQSSMRAFPEMLLQSAGQLEIPVQ 60

Query: 52  ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA------------- 88
                     I    + V   +   +   G    TG   D AL                 
Sbjct: 61  NRLKMPLNKEIGSINTGVYMQENTPNFLQGDLRETGQNTDLALVDITMPEDEETGISASV 120

Query: 89  -WFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGE 147
            +    +  G   TR+G F +  +G L +ASG Y +        +I    + F V   G+
Sbjct: 121 FFKVSGADGGTRYTRNGDFTLDGEGFLTTASGMYVL---DGQDNRIQLGSDRFTVSNAGQ 177

Query: 148 ISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDS 202
           I+ +    A +G    +     ++    G+       P         +G  +++GFLE S
Sbjct: 178 ITGENGETAQLGFGFSENPAELIKE-GDGLFRTEDGAPLAEAVDNPEAGFALQQGFLESS 236

Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           N ++   M  M+   + F +   ++   ++SM +    + 
Sbjct: 237 NVDASRTMTDMMTAYRAFEANQKVLQAYDRSMEKMANEVG 276


>gi|255099439|ref|ZP_05328416.1| flagellar basal body rod protein FlgG [Clostridium difficile
           QCD-63q42]
          Length = 253

 Score =  143 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 51/254 (20%), Positives = 101/254 (39%), Gaps = 13/254 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M T F     A  A + +L  +++N++N+D+ G++ I +++S++V  + N          
Sbjct: 1   MYTMFYTSKTALSANQSKLDIISNNIANSDSTGYKKINMEYSDLVDEVLNRPSYPTNGKD 60

Query: 54  -QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDD 111
               +   +     + E G+   T ++ + A++G+ +F +    G    TR+G F V   
Sbjct: 61  ISTGTGAKATAPMRNYEQGALAPTDSKSNLAIDGEGFFRVIRKDGTYAYTRNGGFNVDAL 120

Query: 112 GSLVSASGK--YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169
           G +V  +G       D                V   GE+    K I  + LY    +Q F
Sbjct: 121 GKIVDDNGNILDVQFDAGYNYNNTNIDSTNLTVSRNGELFVDNKKIGKINLYQPIGTQNF 180

Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           +   +S           +    V + +G+ E SN +   E   +I   + F   +  I  
Sbjct: 181 ISEGDSLFVATDAAQIKQV-EKVDIVQGYRERSNVSLQEEFVDLIATQRAFQMNSKGIKT 239

Query: 230 NEKSMLEAIRNIAS 243
            ++ M +   N+ +
Sbjct: 240 ADE-MWQIANNLRA 252


>gi|254485859|ref|ZP_05099064.1| flagellar basal-body rod protein FlgF [Roseobacter sp. GAI101]
 gi|214042728|gb|EEB83366.1| flagellar basal-body rod protein FlgF [Roseobacter sp. GAI101]
          Length = 237

 Score =  143 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 64/241 (26%), Positives = 110/241 (45%), Gaps = 6/241 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    L  Q+ L + +  VA+N++N  T G+R+  V FSE V  +  D    +S   
Sbjct: 1   MDNASYTILTRQMGLAREMQMVANNIANAATTGYRSEGVIFSEFVQTV--DRGPSLSMGT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           +  +  +   G+   T    DF +EGD +F +E+P G  LTR G F     G LV+  G 
Sbjct: 59  ANVQNTNYMQGALTQTNGTFDFGIEGDGYFLIETPAGERLTRAGSFTPNSAGELVTYDGF 118

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
              LD    PI +PQ      V   G  S  G  IA +G+ S       VR +      +
Sbjct: 119 RV-LDAGGGPIFVPQDAGALGVSSDGTFSVNGAPIAQLGIVSPIAPLDMVREDGVMFRAD 177

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
               P  +     V +GF E SN +++ ++ +MI + + +    + ++  ++ +  A+++
Sbjct: 178 EGVEPAVN---ARVVQGFTEGSNVDAVSQLARMIEVQRAYEMGQSFLESEDERIRTALKS 234

Query: 241 I 241
           +
Sbjct: 235 L 235


>gi|83647172|ref|YP_435607.1| flagellar basal body rod protein FlgF [Hahella chejuensis KCTC
           2396]
 gi|83635215|gb|ABC31182.1| Flagellar basal body rod protein [Hahella chejuensis KCTC 2396]
          Length = 248

 Score =  143 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 50/247 (20%), Positives = 106/247 (42%), Gaps = 8/247 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  I ++            A+N++N +T GF++  ++   +   +  +     ++  
Sbjct: 1   MDKALYIAMSGAKQNMLSQRGHANNLANANTTGFKSDFMQARSM--PVFGEHYPSRAYAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119
           + +     E+GS + TG +LD A+ G+ W A+++P G    TR+G   +  +G L + SG
Sbjct: 59  TERPATDFEMGSLMQTGRDLDVAVAGNGWIAVQAPDGGEAYTREGELLLDVNGVLRTGSG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK---VIATMGLYSVDMSQGFVRRENSG 176
              + +   + +    K  I   G    +   G    +     +  V+     + +   G
Sbjct: 119 LPVLGNGGPIAVPPAAKLNIGVDGTISIVPLGGNPDEIQEVDRIRLVNPPAEDLEKGVDG 178

Query: 177 ISPNIPPTPLEDLSGVTVK--RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
           +    P  P   L    V+   G+LE SN N++ EM +++ L+++F     ++   + + 
Sbjct: 179 LIHLKPDVPGPALPDGLVRLESGYLESSNVNAVEEMTEILSLSRQFELQVKVMRAADDNS 238

Query: 235 LEAIRNI 241
             A R +
Sbjct: 239 EAAARLL 245


>gi|323495376|ref|ZP_08100453.1| flagellar basal body rod protein FlgF [Vibrio brasiliensis LMG
           20546]
 gi|323310299|gb|EGA63486.1| flagellar basal body rod protein FlgF [Vibrio brasiliensis LMG
           20546]
          Length = 249

 Score =  143 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 57/241 (23%), Positives = 97/241 (40%), Gaps = 11/241 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  + ++      Q L   A+N++N  T GFR    +   +      +      F  
Sbjct: 1   MDRALFLAMSGAKQNMQALQLRANNLANVSTTGFRADLAQARSM--QAYGEGLPSRVFSM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASG 119
           + +   + + GS I+TG +LD  ++G  W ++ +      LTR+G  KV  +G LVS +G
Sbjct: 59  TERPGHNFQQGSVITTGRDLDVTIQGQGWISVLDKTGQEGLTRNGNLKVDVNGLLVSGNG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172
               L     PI +P       +G  G IS   +      +  VD        +Q   + 
Sbjct: 119 NLV-LGETGAPITLPIPVSKVEIGNDGTISVVPQGAPADAIEIVDRIKLTSTNNQSLFKD 177

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            N       P    E  + V +  G +E SN N++ EM  +I L ++F     ++   E 
Sbjct: 178 VNGLFRAKDPNAAYEADADVKLLTGAIEGSNVNAIGEMTSLIDLQRQFEMQVKMMSTAED 237

Query: 233 S 233
            
Sbjct: 238 M 238


>gi|300854231|ref|YP_003779215.1| flagellar basal-body rod protein [Clostridium ljungdahlii DSM
           13528]
 gi|300434346|gb|ADK14113.1| flagellar basal-body rod protein [Clostridium ljungdahlii DSM
           13528]
          Length = 262

 Score =  143 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 50/261 (19%), Positives = 108/261 (41%), Gaps = 21/261 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +    ++A  A + +L+++++N++N+DTVG++   V+F+++V    N          
Sbjct: 1   MLRAIWNSVSAMNAQQDKLNSISNNLANSDTVGYKKENVEFNDLVYETLNRKGYPTNSNG 60

Query: 56  -----ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVT 109
                 + V + +       G    TG + D A++GD +F +    G     R G F V 
Sbjct: 61  TNTINGTGVKATEWIRDNAQGPIQQTGLKTDMAIDGDGYFKVTLGNGTAAYERAGNFTVD 120

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV------ 163
            +G+LV ++G    +++ +    +     +F         + G++   +G  SV      
Sbjct: 121 RNGNLVDSNGNKLEVNLTAEGSSLFNSGTVFKDNNFKVDEKTGQIYMNVGNQSVLYGKIN 180

Query: 164 ---DMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
               + Q  ++     +        +   +   + +G LE SN +   EM  MI   + F
Sbjct: 181 IYNAVGQDAMKSIGDNLYQPANNVQMNINTKAHIIQGSLEQSNVDLGREMTDMIMAQRSF 240

Query: 221 NSITTLIDENEKSMLEAIRNI 241
              +  +  +++ M   I ++
Sbjct: 241 ELASKGLTTSDE-MWGLINSM 260


>gi|220903670|ref|YP_002478982.1| hypothetical protein Ddes_0391 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219867969|gb|ACL48304.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           desulfuricans subsp. desulfuricans str. ATCC 27774]
          Length = 265

 Score =  143 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 61/262 (23%), Positives = 112/262 (42%), Gaps = 21/262 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF-- 58
           MQ     GL A L  E R++ +A+N++N +T G++   V F + +     D  ++     
Sbjct: 1   MQAGMFSGLFAALTTEHRMNFIANNLANANTRGYKRDTVAFKDTMVTYAFDEIREPLMNL 60

Query: 59  --------------VASGKEYLSKEVGSFISTGTELDFALEG-DAWFALESPRGIILTRD 103
                         V      +    GS   +G  LD A+ G +A+F + +P G  LTR+
Sbjct: 61  KSKPLFPEPLNASRVRLAVSKIDFAQGSMQYSGNPLDMAINGENAFFRVATPTGDFLTRN 120

Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
           G F ++++G++++  G  P+       I IPQ      V   G++     V+  + L SV
Sbjct: 121 GAFVLSENGTIMTPQGY-PLQAQGGGNIVIPQGTRHIQVSGDGQVIADNDVLGQIALVSV 179

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSG---VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
           D  Q   +  N+   P       E  +      +++GF E +N   + EM  MI + ++F
Sbjct: 180 DNPQNLEKMGNNLYRPRENVQVAEGNAYLEGGRIEQGFTEAANVEVVPEMVNMIEVQRQF 239

Query: 221 NSITTLIDENEKSMLEAIRNIA 242
            +   ++  ++     A   + 
Sbjct: 240 EAYQKVMQTSDTLDRAATEKVG 261


>gi|114765245|ref|ZP_01444377.1| hypothetical protein 1100011001307_R2601_00410 [Pelagibaca
           bermudensis HTCC2601]
 gi|114542380|gb|EAU45408.1| hypothetical protein R2601_00410 [Roseovarius sp. HTCC2601]
          Length = 249

 Score =  143 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 57/246 (23%), Positives = 107/246 (43%), Gaps = 4/246 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-DQKISFV 59
           M  S  + ++   ALE++L   A+N++N ++ GF+  +V F   +      +  +  ++V
Sbjct: 1   MDNSTYVAISKLTALERQLDVTANNIANANSSGFKAERVLFETYLQKDDASLAGEGTNYV 60

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSAS 118
                Y+    G  + TG  LD AL G  WFA E P   +   RDG+  +   G + +AS
Sbjct: 61  LDRGSYVDDTPGVVVQTGNPLDLALTGQGWFAYEMPDGRMAYGRDGQLVLDAQGQVTTAS 120

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDMSQGFVRRENSGI 177
           G   +    +     P+      + + G   S +G V+  +G++ +   Q   R      
Sbjct: 121 GAQILDLGGAPLNIPPEFAASVTISDDGVISSPEGGVMGQVGIFELPDRQTLSRGGAGMF 180

Query: 178 SPNIPPTPLEDLSGV-TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
            PN     L       +V +G +E SN   + E+ ++I++ Q +     L+  +++   E
Sbjct: 181 VPNAEAQGLAPDETGSSVIQGAVESSNVQPVTEVTRLINIQQAYQHALNLVASDDELKKE 240

Query: 237 AIRNIA 242
            +  I 
Sbjct: 241 MLTRIG 246


>gi|260429533|ref|ZP_05783510.1| flagellar basal-body rod protein FlgF [Citreicella sp. SE45]
 gi|260420156|gb|EEX13409.1| flagellar basal-body rod protein FlgF [Citreicella sp. SE45]
          Length = 237

 Score =  143 bits (359), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 64/236 (27%), Positives = 112/236 (47%), Gaps = 6/236 (2%)

Query: 6   NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65
              L+ QL L + +  +A+N++N  T G+R   V FSE V    +     ++  A+    
Sbjct: 6   YTTLSRQLGLSREMQMIANNIANAATTGYRQQGVVFSEYVRQTDDSGS--VAMSAAHVRN 63

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125
            S E G+   TG +LD A+EGD +F +++P G  LTR+G F V+  G LV+  G    LD
Sbjct: 64  TSFEQGALTRTGGQLDLAIEGDGFFLIQTPGGERLTRNGAFAVSAQGDLVTQDGYAV-LD 122

Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185
               P+ +P         + G +S KG  I  +G+         VR        +    P
Sbjct: 123 AGGAPVFVPPDASDLAFAQDGTMSSKGTPIGQVGIVQPVDQGAMVREGGVMFRADAGYEP 182

Query: 186 LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
            E      V +GF+E+SN + + ++ +MI + + +    + +   ++ +  AI+++
Sbjct: 183 AET---PRVMQGFVENSNVDPILQIARMIEVQRAYEMGQSFLQREDERVRAAIKSM 235


>gi|88799022|ref|ZP_01114603.1| Flagellar basal body rod protein [Reinekea sp. MED297]
 gi|88778249|gb|EAR09443.1| Flagellar basal body rod protein [Reinekea sp. MED297]
          Length = 247

 Score =  143 bits (359), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 50/238 (21%), Positives = 104/238 (43%), Gaps = 7/238 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  I +          ++ ++N++N  T GF+    +   +   +  +     +F  
Sbjct: 1   MDRAIYIAMTGAKNNMMAQTSHSNNLANARTFGFKADWAQARAI--PVWGEHHPSRAFSM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASG 119
           + +       G+ I TG ELD A+ GD +FA+ ++      TR G F VT  G L++ +G
Sbjct: 59  TERPASDFNDGALIETGNELDTAITGDGFFAVLDAEGQEAYTRRGDFSVTPLGELINGAG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQ---KGKVIATMGLYSVDMSQGFVRRENSG 176
           +  + +   + +   +K EI   G            ++IA   L  V+ +     +   G
Sbjct: 119 ESVIGEGGPIVLPPYEKVEIAGDGTISIRPAGAGPNEMIAVDALKIVNPNFQDFEKGTDG 178

Query: 177 ISPNIPPTPL-EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           +   +   P+  D   ++V  GF+E SN NS++E+  ++ L +++ +   ++   +  
Sbjct: 179 LFRPVEGAPILPDDPLLSVVSGFVEASNVNSVHELTNLLALNRQYETQVKMMKTADDV 236


>gi|295697723|ref|YP_003590961.1| fagellar hook-basal body protein [Bacillus tusciae DSM 2912]
 gi|295413325|gb|ADG07817.1| fagellar hook-basal body protein [Bacillus tusciae DSM 2912]
          Length = 265

 Score =  143 bits (359), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 51/265 (19%), Positives = 99/265 (37%), Gaps = 25/265 (9%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV-----------GAIKN 50
                 G +   A    ++ +A++ +N +T G+++  + FS+++                
Sbjct: 1   MRVLWTGASGMSAASHWVNAMANDAANMNTTGYKSEDLAFSDLLAVHYAPGVRIPAPDTP 60

Query: 51  DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV-- 108
                 S V +         G    TG +LD A EG+ +F +  P G+  TRDG F+V  
Sbjct: 61  PGLPVGSGVRAAARVSDWSQGPLQETGRKLDVAWEGEGFFVVSGPEGMRYTRDGSFQVSV 120

Query: 109 -TDDGSLVSASGKYPVLDMASVPIQIPQKDEI-----FNVGEKGEISQKGKVIATMGLYS 162
                + +  +  + VLD    PI +   D        +    G ++     IA +G   
Sbjct: 121 DPAGQATLVTADGHVVLDEYGAPIDLTGVDLSTLAIGPDGRITGSVAGTPTDIAVLGRVV 180

Query: 163 VDMSQGFVRRENSGI-----SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217
            D  Q  ++  N+        P  P    + L    +++G+LE SN      M +++   
Sbjct: 181 FDHPQRLIKAGNNLYDAGTEVPLTPADIADPLRFGRLRQGYLEASNVELTDVMTKLMEAE 240

Query: 218 QKFNSITTLIDENEKSMLEAIRNIA 242
           + +      +   ++ M     N+ 
Sbjct: 241 RLYALSARAVLTADQMM-SMANNLR 264


>gi|260222469|emb|CBA32064.1| Flagellar basal-body rod protein flgF [Curvibacter putative
           symbiont of Hydra magnipapillata]
          Length = 246

 Score =  143 bits (359), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 51/240 (21%), Positives = 87/240 (36%), Gaps = 5/240 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       +    A   R S +A+N++N  T GFR     +  V   ++ +      F  
Sbjct: 1   MDRLIYTAMTGANAAASRQSVLANNLANVSTNGFRAQLATYRAV--PLRGEGATTRVFAL 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119
                     G  + T   LD   +GDAW  ++        TR+G  +V  DG+L + +G
Sbjct: 59  EATAGHLNTPGPAMRTDRSLDVMAKGDAWLTVQGLDGTEAYTRNGHIEVATDGTLTTGNG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS--VDMSQGFVRRENSGI 177
              +    S        +               +    +G     V  ++  ++R   G+
Sbjct: 119 LQVLSSDGSPITSPAGAELTVQPDGNVSAKVGNQPANVIGRLKLVVPTAEDPLKRGGDGL 178

Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
              +   PL       V+ G LE SN N++  M  MI   ++F + T L+   E +   A
Sbjct: 179 FRTLSGDPLNSEDTARVQAGMLEGSNVNAIEAMVGMIQTARQFEAQTRLMQTAESNDRAA 238


>gi|170742326|ref|YP_001770981.1| flagellar basal body rod protein FlgF [Methylobacterium sp. 4-46]
 gi|168196600|gb|ACA18547.1| flagellar basal body rod protein [Methylobacterium sp. 4-46]
          Length = 248

 Score =  143 bits (359), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 65/247 (26%), Positives = 114/247 (46%), Gaps = 9/247 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND-----IDQK 55
           MQ +  IGL+AQ+AL + L  +A+NM+N  T GF+     F E +            D++
Sbjct: 1   MQNAQLIGLSAQMALGRELEVIANNMANVSTTGFKGRTTHFQEYLMPKARAETFRMPDRR 60

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115
           +S+V      L    G   STG  L+ A+ GDA+FA+++P+G   TR+G F++   G LV
Sbjct: 61  LSYVIDAGTPLDLAQGPIESTGNPLNAAIRGDAFFAVQTPQGERYTRNGAFELNAQGQLV 120

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
           ++ G   +      PIQI  ++    +G  G +S        + L +    +       +
Sbjct: 121 TSDGNLVLG--EGGPIQINPQETGLAIGADGTVSTSQGNRGRIRLVAFADPRQLTNAGAN 178

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
             + + P  P        ++ G LE SN + +  M +M+ + + +  +   I   +    
Sbjct: 179 LYAASAP--PRPAGPLARIEPGALERSNVSPVLTMTRMMEVNRVYALVADTIARMDSLRG 236

Query: 236 EAIRNIA 242
            AI+ +A
Sbjct: 237 SAIQRLA 243


>gi|254973936|ref|ZP_05270408.1| flagellar basal body rod protein FlgG [Clostridium difficile
           QCD-66c26]
 gi|255091322|ref|ZP_05320800.1| flagellar basal body rod protein FlgG [Clostridium difficile CIP
           107932]
 gi|255312980|ref|ZP_05354563.1| flagellar basal body rod protein FlgG [Clostridium difficile
           QCD-76w55]
 gi|255515739|ref|ZP_05383415.1| flagellar basal body rod protein FlgG [Clostridium difficile
           QCD-97b34]
 gi|255648833|ref|ZP_05395735.1| flagellar basal body rod protein FlgG [Clostridium difficile
           QCD-37x79]
 gi|260682050|ref|YP_003213335.1| flagellar basal body rod protein FlgG [Clostridium difficile CD196]
 gi|260685648|ref|YP_003216781.1| flagellar basal body rod protein FlgG [Clostridium difficile
           R20291]
 gi|260208213|emb|CBA60571.1| putative flagellar basal-body rod protein [Clostridium difficile
           CD196]
 gi|260211664|emb|CBE01933.1| putative flagellar basal-body rod protein [Clostridium difficile
           R20291]
          Length = 253

 Score =  143 bits (359), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 49/254 (19%), Positives = 99/254 (38%), Gaps = 13/254 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV--------GAIKNDI 52
           M T F     A  A + +L  +++N++N+D+ G++ I +++S++V             + 
Sbjct: 1   MYTMFYTSKTALSANQSKLDIISNNIANSDSTGYKKINMEYSDLVDEVLNRPSYPTNGND 60

Query: 53  DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDD 111
               +   +       E G+   T ++ + A++G+ +F +    G    TR+G F +   
Sbjct: 61  ISTGTGAKATAPMRIYEQGALAPTDSKSNLAIDGEGFFRVIRKDGTYAYTRNGGFNIDGL 120

Query: 112 GSLVSASGK--YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169
           G +V  +G       D                V   GE+    K I  + LY    +Q F
Sbjct: 121 GKIVDDNGNILDVQFDAGYNYNNTNIDSTNLTVSRNGELFVDNKKIGKINLYQPIGTQNF 180

Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           +   +S           +    V + +G+ E SN +   E   +I   + F   +  I  
Sbjct: 181 ISEGDSLFVATDAAQIKQV-EKVDIVQGYRERSNVSLQEEFVDLIATQRAFQMNSKGIKT 239

Query: 230 NEKSMLEAIRNIAS 243
            ++ M +   N+ +
Sbjct: 240 ADE-MWQIANNLRA 252


>gi|297182937|gb|ADI19086.1| flagellar basal body rod protein [uncultured delta proteobacterium
           HF0070_15B21]
          Length = 258

 Score =  143 bits (359), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 61/256 (23%), Positives = 110/256 (42%), Gaps = 28/256 (10%)

Query: 9   LAAQLAL-------EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ------- 54
           ++   +L       E+++ TVA+N++N  TVGF+  +  F EV+  ++  + Q       
Sbjct: 1   MSGLTSLVQAGGVLEKKIETVANNLANASTVGFKEDQPSFREVLSTVQRVVPQSDEENFL 60

Query: 55  -----------KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103
                        S V   +   +   G F  TG ELD ALE + +F++ +P+G   TR 
Sbjct: 61  SHEYLDQYVGMDKSAVMVDEIGKNFTTGRFRDTGNELDLALENEGFFSISTPQGERFTRA 120

Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
           G FK+   G +V+  G   +     + I+    +    V E G+++ +G V+  +     
Sbjct: 121 GNFKLDSQGRMVTQDGFPLLGKKGPIQIK---GNGPIQVDENGQVAVEGTVLDQLKTVRF 177

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223
                  +  N   +P            + V++G LE SN N++ EM +MI  T+ +  +
Sbjct: 178 RNQDQLQKLGNHFYAPIRSDDVPIPSREIVVRQGILEQSNVNTVLEMSRMITATRSYEMV 237

Query: 224 TTLIDENEKSMLEAIR 239
              I   +    +AI 
Sbjct: 238 QKAITNLDSLDEKAIT 253


>gi|296157455|ref|ZP_06840290.1| flagellar basal-body rod protein FlgF [Burkholderia sp. Ch1-1]
 gi|295892227|gb|EFG72010.1| flagellar basal-body rod protein FlgF [Burkholderia sp. Ch1-1]
          Length = 252

 Score =  143 bits (359), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 54/249 (21%), Positives = 97/249 (38%), Gaps = 9/249 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI----DQKI 56
           M       ++      ++ + VA+N++N  T GFR     F  V  +  +      +   
Sbjct: 1   MDRLIYTAMSGSTQALEQQAIVANNLANASTTGFRAQLATFRAVPMSFGDGSSINDNTTR 60

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLV 115
           +FV S         G    TG  LD A++G  W A   +  G   TR G   + ++G LV
Sbjct: 61  TFVLSSTPGADYTPGPIQQTGNPLDVAIQGPGWLAVQTTDGGEAYTRAGNLHIDENGQLV 120

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRR 172
           +A+ +  + +   V +    +  I   G    ++      A + +     V+     + R
Sbjct: 121 NATNQVVLGNGGPVSVPPGAEITIGKDGTVSALTPGDPPTAVVTVDQLKLVNPDPQTMTR 180

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            + G+       P +    VT+    LE SN N +  M  MI   ++F   T L++  +K
Sbjct: 181 GDDGLFRTGDGNPADADQTVTLAPASLEGSNVNPVSAMVSMITNARQFQMQTKLLESADK 240

Query: 233 SMLEAIRNI 241
           +   A   +
Sbjct: 241 NDQSA-NQL 248


>gi|307731362|ref|YP_003908586.1| flagellar basal-body rod protein FlgF [Burkholderia sp. CCGE1003]
 gi|307585897|gb|ADN59295.1| flagellar basal-body rod protein FlgF [Burkholderia sp. CCGE1003]
          Length = 252

 Score =  143 bits (359), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 55/249 (22%), Positives = 97/249 (38%), Gaps = 9/249 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI----DQKI 56
           M       ++      ++ + VA+N++N  T GFR     F  V  +  +      +   
Sbjct: 1   MDRLIYTAMSGSTQALEQQAIVANNLANASTTGFRAQLATFRAVPMSFGDGSSINDNTTR 60

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLV 115
           +FV S         G    TG  LD A+EG  W A+++  G    TR G   +  +G LV
Sbjct: 61  TFVLSSTPGADYTPGPIQQTGNPLDVAIEGPGWLAVQTADGGEAYTRAGNLHIDQNGQLV 120

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRR 172
           +A+ +  + +   + +    +  I   G    ++      A + +     V+     + R
Sbjct: 121 NATNQVVLGNGGPMAVPPGAQITIGRDGTVTALTPGDPPTAVVTIDQLKLVNPDPQTLTR 180

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            + G+       P E    V V    LE SN N +  M  MI   ++F   T L++  +K
Sbjct: 181 GDDGLFRTADGNPAEADPTVAVAPASLEGSNVNPVSAMVAMITNARQFQMQTKLLESADK 240

Query: 233 SMLEAIRNI 241
           +   A   +
Sbjct: 241 NDQSA-NQL 248


>gi|149184209|ref|ZP_01862527.1| Flagellar basal-body rod FlgG [Erythrobacter sp. SD-21]
 gi|148831529|gb|EDL49962.1| Flagellar basal-body rod FlgG [Erythrobacter sp. SD-21]
          Length = 243

 Score =  143 bits (359), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 43/243 (17%), Positives = 87/243 (35%), Gaps = 20/243 (8%)

Query: 19  LSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK-------------ISFVASGKEY 65
           +  +A+N++N  T GF+  +  F+ +         Q+              + VA     
Sbjct: 1   MRVIANNLANVGTTGFKRDRANFATLAYQDARVAGQRSSAETAYATGLNLGTGVAVQSTS 60

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYPVL 124
                G+  +T    D AL+GD +F +E P   I  TR G F ++ +G LV+  G     
Sbjct: 61  QVMTQGALSTTSNAFDLALDGDGYFQIEMPGGRIGYTRAGNFTLSAEGQLVTQQGYSVQP 120

Query: 125 DMASVPIQIPQKDEIFNVGEKGEISQKGKV-IATMGLYSVDMSQGFVRRENSGISPNIPP 183
            +                       + G   +  + +       G     ++ +      
Sbjct: 121 AITVPEGATAIAVSPDGTVSATLPGEAGPAELGQIQIARFTNPSGLQAIGDNFLVETAAS 180

Query: 184 -----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
                 P  +     +++G LE SN N + E+ +MI   + +   + +I   ++ +  A 
Sbjct: 181 GAPELAPGGENGRGNIRQGMLESSNVNIVEELVEMIECQRAYEISSKMISAVDEMLRNAN 240

Query: 239 RNI 241
           + +
Sbjct: 241 QTL 243


>gi|226939373|ref|YP_002794446.1| FlgF1 [Laribacter hongkongensis HLHK9]
 gi|226714299|gb|ACO73437.1| FlgF1 [Laribacter hongkongensis HLHK9]
          Length = 247

 Score =  143 bits (359), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 52/241 (21%), Positives = 92/241 (38%), Gaps = 6/241 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     I +     +E +  T A+N++N  T GF+     F  +   +  D     ++  
Sbjct: 1   MDKMLYIAMNGAKHVELQQQTTANNLANAHTPGFKAELNAFRAL--PVVGDGTPTRAYSV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
                  +  G  I+TG + DFA+ G  WFA++ P+     TR G F + ++G + +  G
Sbjct: 59  DHTTGHDESQGPMITTGNDQDFAVRGRGWFAVQDPQGNEAYTRAGGFVLDENGIMRTRDG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEK---GEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           +  V +   + +    +  I   G             V     +  V      + +   G
Sbjct: 119 RVIVGEGGPITVPPNSQVMIGEDGTVSAVQTDQIPRTVQVVDRIKLVGGEPRDLFKGEDG 178

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           +         E   GV V  G LE SN N +  + QMI   ++F     L+   +++   
Sbjct: 179 LFRRRDGQIAEADDGVRVATGMLEGSNVNPVDALTQMISHGRQFEFNVKLMQNADQNARR 238

Query: 237 A 237
           A
Sbjct: 239 A 239


>gi|126697841|ref|YP_001086738.1| flagellar basal body rod protein FlgG [Clostridium difficile 630]
 gi|255305297|ref|ZP_05349469.1| flagellar basal body rod protein FlgG [Clostridium difficile ATCC
           43255]
 gi|115249278|emb|CAJ67091.1| Flagellar basal body rod protein FlgG [Clostridium difficile]
          Length = 253

 Score =  143 bits (359), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 50/254 (19%), Positives = 100/254 (39%), Gaps = 13/254 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV--------GAIKNDI 52
           M T F     A  A + +L  +++N++N+D+ G++ I +++S++V             + 
Sbjct: 1   MYTMFYTSKTALSANQSKLDIISNNIANSDSTGYKKINMEYSDLVDEVLNRPSYPTNGND 60

Query: 53  DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDD 111
               +   +     + E G+   T ++ + A++G+ +F +    G    TR+G F V   
Sbjct: 61  ISTGTGAKATAPMRNYEQGALAPTDSKSNLAIDGEGFFRVIRKDGTYAYTRNGGFNVDAL 120

Query: 112 GSLVSASGK--YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169
           G +V  +G       D                V   GE+    K I  + LY    +Q F
Sbjct: 121 GKIVDDNGNILDVQFDAGYNYNNTNIDSTNLTVSRNGELFVDNKKIGKINLYQPIGTQNF 180

Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           +   +S           +    V + +G+ E SN +   E   +I   + F   +  I  
Sbjct: 181 ISEGDSLFVATDAAQIKQV-EKVDIVQGYRERSNVSLQEEFVDLIATQRAFQMNSKGIKT 239

Query: 230 NEKSMLEAIRNIAS 243
            ++ M +   N+ +
Sbjct: 240 ADE-MWQIANNLRA 252


>gi|319787120|ref|YP_004146595.1| flagellar basal-body rod protein FlgF [Pseudoxanthomonas suwonensis
           11-1]
 gi|317465632|gb|ADV27364.1| flagellar basal-body rod protein FlgF [Pseudoxanthomonas suwonensis
           11-1]
          Length = 249

 Score =  143 bits (359), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 52/243 (21%), Positives = 91/243 (37%), Gaps = 12/243 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  I +    A  Q  STV+ N++N DT GF+            ++           
Sbjct: 1   MDKALYIAMTGARASLQAQSTVSHNLANADTAGFKAALANTEAF--PVRGAGYPSRVAAL 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
              +      G+   TG  LD +L  D W A+++P      TR G   +T +G LV++ G
Sbjct: 59  HVDQGFDASAGALRVTGNPLDVSLHADRWLAVQAPDGSEAYTRAGDLSLTPNGQLVTSGG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM-------SQGFVRR 172
              +    +         +   +G+ G +S          +  V          Q   R 
Sbjct: 119 HALLGQDGNPIAL--PPHQALEIGQDGTVSIVPLGEGADTMAMVGRLKVVDARPQQLTRG 176

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            +  +    P  PL+   G  +  G LE+SN ++   + QMI L ++F     +I   ++
Sbjct: 177 LDGLMRNTAPQQPLQQAPGTVMTTGALEESNVDAAGALVQMIQLQRQFEMQVKVIKTGDE 236

Query: 233 SML 235
           +  
Sbjct: 237 NAR 239


>gi|325982370|ref|YP_004294772.1| flagellar basal-body rod protein FlgF [Nitrosomonas sp. AL212]
 gi|325531889|gb|ADZ26610.1| flagellar basal-body rod protein FlgF [Nitrosomonas sp. AL212]
          Length = 247

 Score =  143 bits (359), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 50/243 (20%), Positives = 95/243 (39%), Gaps = 6/243 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       +        + +TVA N++N  T G+R+    F  V   +  D     +FV 
Sbjct: 1   MDRLIYTSMTGANHTLNQQATVAHNLANASTTGYRSETNAFRAV--PLFGDGLPTRAFVV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASG 119
                     G   +TG +LD A+ G  W +++        TR+G  +V  +G L++ +G
Sbjct: 59  DSTTGSDFTTGPLETTGRDLDVAIRGPGWISVQLDNGEEAYTRNGSLQVGPNGLLLTQNG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGE---ISQKGKVIATMGLYSVDMSQGFVRRENSG 176
                D   + +    +  I   G        +    V     +  V+  +  + +   G
Sbjct: 119 LKVKGDTGVISVPPETRITIGVDGTVSTVPLNALPNTVAIVGRIKLVNPPEESLVKGADG 178

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           +            + V +  G LE SN N ++EM  MI L ++F+    +++  E++  +
Sbjct: 179 LFRQKDGKEALVDARVRLIDGTLEGSNVNVVHEMVSMIALARQFDMQMKMLENAERNAQQ 238

Query: 237 AIR 239
           A +
Sbjct: 239 ASQ 241


>gi|171321839|ref|ZP_02910740.1| flagellar basal-body rod protein FlgF [Burkholderia ambifaria
           MEX-5]
 gi|171092877|gb|EDT38129.1| flagellar basal-body rod protein FlgF [Burkholderia ambifaria
           MEX-5]
          Length = 252

 Score =  142 bits (358), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 50/249 (20%), Positives = 89/249 (35%), Gaps = 9/249 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS--- 57
           M       +        + + VA+N++N  T GFR     +  V     +      +   
Sbjct: 1   MDRLIYTAMTGASQSLDQQAVVANNLANASTTGFRAQLATYRAVPMNFGDGSTSDPTTTR 60

Query: 58  -FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLV 115
            +V +         G    TG  LD A++G  W A+++       TR G   V ++G LV
Sbjct: 61  TYVLASTPGADYAPGPITRTGNPLDVAVQGAGWLAVQTADGSEAYTRAGNLHVDENGQLV 120

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT---MGLYSVDMSQGFVRR 172
           +AS    + +   + +    +  I   G    +       A      +  V+     + R
Sbjct: 121 NASNLPVIGNGGPISVPPNAEVTIGKDGTVSALMPGDPPTAVAIVDQMKLVNPDPATLAR 180

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            N G+       P +    V V    LE SN N +  M  MI   + F   + LI   ++
Sbjct: 181 GNDGLFRTADGNPADSDPSVVVTPNSLEGSNVNPVTAMVAMIDNARAFQLQSKLIQTADQ 240

Query: 233 SMLEAIRNI 241
           +  ++   +
Sbjct: 241 N-EQSANQL 248


>gi|148976395|ref|ZP_01813101.1| polar flagellar FlgF [Vibrionales bacterium SWAT-3]
 gi|145964218|gb|EDK29474.1| polar flagellar FlgF [Vibrionales bacterium SWAT-3]
          Length = 249

 Score =  142 bits (358), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 60/241 (24%), Positives = 101/241 (41%), Gaps = 11/241 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  + ++      Q L   A+N++N  T GFR    +   +      +      F  
Sbjct: 1   MDRALFLAMSGAKQNMQALQLRANNLANVSTTGFRADLAQARSM--QAYGEGMPTRVFSM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           + +   +   GS ++TG +LD  ++GD W ++        LTR+G  KV  +G L +ASG
Sbjct: 59  TERPGHNFAQGSVVTTGRDLDVTIQGDGWISVMDNTGREGLTRNGNLKVDQNGLLTNASG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172
            + VL     PI +P       +G  G IS   +      L  VD        +Q   + 
Sbjct: 119 -HLVLGENDAPITLPIPISKVEIGTDGTISVIPQGAPAEELEVVDRIKLVRPDNQSLFKD 177

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            N       P    E  + VT+ +G +E SN N++ EM  +I L ++F     ++   E+
Sbjct: 178 TNGLFRSKNPEQAYEADAAVTLLKGAVEGSNVNAVGEMTSLIDLQRQFEMQVKMMSTAEE 237

Query: 233 S 233
            
Sbjct: 238 M 238


>gi|107023952|ref|YP_622279.1| flagellar basal body rod protein FlgF [Burkholderia cenocepacia AU
           1054]
 gi|116691039|ref|YP_836662.1| flagellar basal body rod protein FlgF [Burkholderia cenocepacia
           HI2424]
 gi|170734373|ref|YP_001766320.1| flagellar basal body rod protein FlgF [Burkholderia cenocepacia
           MC0-3]
 gi|254246966|ref|ZP_04940287.1| Flagellar basal body rod protein [Burkholderia cenocepacia PC184]
 gi|105894141|gb|ABF77306.1| Flagellar basal-body rod FlgF [Burkholderia cenocepacia AU 1054]
 gi|116649128|gb|ABK09769.1| flagellar basal-body rod protein FlgF [Burkholderia cenocepacia
           HI2424]
 gi|124871742|gb|EAY63458.1| Flagellar basal body rod protein [Burkholderia cenocepacia PC184]
 gi|169817615|gb|ACA92198.1| flagellar basal-body rod protein FlgF [Burkholderia cenocepacia
           MC0-3]
          Length = 252

 Score =  142 bits (358), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 49/249 (19%), Positives = 89/249 (35%), Gaps = 9/249 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID----QKI 56
           M       +        + + VA+N++N  T GFR     +  V     +  +       
Sbjct: 1   MDRLIYTAMTGASQSLDQQAIVANNLANASTTGFRAQLATYRAVPMNFGDGSNIDPTTTR 60

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLV 115
           ++V +         G    TG  LD A++G  W ++++       TR G   V ++G LV
Sbjct: 61  TYVLASTPGADYAPGPITRTGNPLDVAVQGPGWLSVQTADGSEAYTRAGNLHVDENGQLV 120

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT---MGLYSVDMSQGFVRR 172
           +AS    + +   + +    +  I   G    +       A      +  V+     + R
Sbjct: 121 NASNLPVIGNGGPISVPPNAEVTIGKDGTVSALMPGDPPTAVAIVDQMKLVNPDAATLTR 180

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            N G+       P +    V V    LE SN N +  M  MI   + F   + LI   ++
Sbjct: 181 GNDGLFRTADGNPADVDPNVVVTPNSLEGSNVNPVTAMVAMIDNARAFQLQSKLIQTADQ 240

Query: 233 SMLEAIRNI 241
           +  +    +
Sbjct: 241 N-EQTANQL 248


>gi|315127352|ref|YP_004069355.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Pseudoalteromonas sp. SM9913]
 gi|315015866|gb|ADT69204.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Pseudoalteromonas sp. SM9913]
          Length = 247

 Score =  142 bits (358), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 50/241 (20%), Positives = 97/241 (40%), Gaps = 7/241 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     I  +      Q L+  A+N++N +T GF++   +   +      +      F  
Sbjct: 1   MDKMVYIAASGAKQSMQGLALKANNLANANTTGFKSDFAQARSM--QAFGEGLPTRVFAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
             +   +   G  + TG  LD A+  +AW +++        T+ G   +T +G L ++ G
Sbjct: 59  QERPGSNMTSGGVVETGRSLDIAMSDNAWLSVQDASGNEAYTKVGSLNITAEGMLTTSDG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS----VDMSQGFVRRENS 175
           +  + +   V + +P +   F+     ++  +G     +        VD +   + + N 
Sbjct: 119 RQVIGEGGPVILPVPIEKIEFSKDGTIQVRPQGAPANFLEEVDRLKVVDANNATLEKGND 178

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
           G+    P   +E  + V V  G LE SN N ++EM  MI   ++F     L+   E+   
Sbjct: 179 GLFRAKPGQIVETSANVQVLGGTLEKSNVNPVHEMVDMISHQRQFELQVKLMKTAEEIDE 238

Query: 236 E 236
            
Sbjct: 239 R 239


>gi|217076898|ref|YP_002334614.1| flagellar basal-body rod protein FlgF [Thermosipho africanus
           TCF52B]
 gi|217036751|gb|ACJ75273.1| flagellar basal-body rod protein FlgF [Thermosipho africanus
           TCF52B]
          Length = 235

 Score =  142 bits (358), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 47/256 (18%), Positives = 102/256 (39%), Gaps = 38/256 (14%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50
           M     +     LA   +L T+++N+SN +T+G++   + F   +    +          
Sbjct: 1   MYKGVYLASMGMLADITKLDTLSNNISNAETIGYKADNLAFKTYLEKRLHSFKPMPQEKK 60

Query: 51  ----DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106
               DI +    V   +       G+   T   LDFA++G  +F +E     + TR G F
Sbjct: 61  VEIKDIGKFEQAVILDEVKTDFSQGNIEHTENMLDFAIDGSGFFVVEKNGEKLYTRAGNF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           K++ DG LV++ G Y                 +    ++ ++  K  +I  + +  +D  
Sbjct: 121 KISSDGFLVTSEGYYV----------------LDKNDQRIKVFDKSDLINNIKVVDLDNP 164

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
           +        G           +     + +G++E SN + + EM +MI   + +  ++  
Sbjct: 165 RKIGYTFYKGQ--------EIEKENFRILQGYVEKSNVDIVKEMVKMIEANRHYEVLSKA 216

Query: 227 IDENEKSMLEAIRNIA 242
           +  +++ + ++I +  
Sbjct: 217 VTVHDELLNKSINSAG 232


>gi|168186143|ref|ZP_02620778.1| flagellar basal-body rod protein FlgG [Clostridium botulinum C str.
           Eklund]
 gi|169295828|gb|EDS77961.1| flagellar basal-body rod protein FlgG [Clostridium botulinum C str.
           Eklund]
          Length = 257

 Score =  142 bits (358), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 47/256 (18%), Positives = 102/256 (39%), Gaps = 15/256 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S     +   A  ++L+ +++NM+N  TVG++ + V+F++++    +          
Sbjct: 1   MLRSIWNSRSGMSAEMEKLNAISNNMANATTVGYKKVDVQFNDLMQENLDRYGYPVSKGN 60

Query: 56  ----ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTD 110
                + V + +       G+ + T    D A++G  +F ++  +     TR G F + +
Sbjct: 61  PQFTGTGVRTTELERDNAQGNLLQTNKNTDIAIDGHGFFKVQDGKGRTFYTRGGSFNIDN 120

Query: 111 DGSLVSASGKYPVL----DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
            G++V   G   V+               +   F + E+G +S      A + +Y+    
Sbjct: 121 SGTVVDKDGNKLVILNERGENINNPGAGFRTTSFKINEEGYVSGGPNTNARIPIYTSIGD 180

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
                  ++   P    T +     V++ +GF E SN +   EM  +I   + F   ++ 
Sbjct: 181 NSMKSIGDNLYVPENANTIVVQNEDVSLLQGFTEQSNVDLGKEMADLIITQRAFQLNSSA 240

Query: 227 IDENEKSMLEAIRNIA 242
           +   ++ M     N+ 
Sbjct: 241 LKTADE-MWGMANNLR 255


>gi|330830302|ref|YP_004393254.1| flagellar basal-body rod protein FlgF [Aeromonas veronii B565]
 gi|328805438|gb|AEB50637.1| Flagellar basal-body rod protein FlgF [Aeromonas veronii B565]
          Length = 248

 Score =  142 bits (358), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 52/240 (21%), Positives = 100/240 (41%), Gaps = 10/240 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     I ++        L+   +N++N +T GF++   +   +      +      F  
Sbjct: 1   MDHLLYIAMSGAKETMNSLAVRGNNLANANTTGFKSDFEQARSM--QAFGEGLPSRVFAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119
           + +   + + G  ++TG +LD A++G  W A++ P+G    TR G  +V   G+L +++G
Sbjct: 59  AERPGQNLQHGMLMTTGRDLDVAVDGPGWIAVQDPKGGEAYTRMGNLQVNATGNLQTSTG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV------DMSQGFVRRE 173
              V D    PI +P   E   +   G IS + +  A             + +   V + 
Sbjct: 119 LNVV-DDGGQPIVLPMPMEKLEINRDGTISGRPEGAAANLPEDFQRIKLVNPAADAVEKG 177

Query: 174 NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
             G+            + V +  G LE SN N + EM  +I L ++F +   ++   E++
Sbjct: 178 QDGLFRRKDGQNEPASANVGLIAGSLEGSNVNVVDEMTNLIRLQRQFETQVKIMKTAEEN 237


>gi|119469951|ref|ZP_01612756.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Alteromonadales bacterium TW-7]
 gi|119446661|gb|EAW27934.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Alteromonadales bacterium TW-7]
          Length = 247

 Score =  142 bits (358), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 47/241 (19%), Positives = 97/241 (40%), Gaps = 7/241 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     I  +      Q L+  A+N++N +T GF++   +   +      +      F  
Sbjct: 1   MDKMVYIAASGAKQSLQGLALKANNLANANTTGFKSDFAQARSM--QAFGEGLPSRVFSM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
             +   +   G  + TG +LD A+  +AW +++        T+ G   +T +G L+++ G
Sbjct: 59  QERPGSNMTSGGIVETGRDLDIAMSDNAWLSVQDASGNEAYTKVGTLNITAEGMLMTSHG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS----VDMSQGFVRRENS 175
           +  + +   V + +P +   F+     ++  +G     +        V+ +   + + N 
Sbjct: 119 RQVIGEGGPVILPVPIEKIEFSEDGAIQVRPQGAPATFLEEVDRLKVVEANSFQLEKGND 178

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
           G+        ++  + V V  G LE SN N ++EM  MI   ++F     L+   E    
Sbjct: 179 GLFRPKAGEVVDTSANVKVLSGTLEMSNVNPVHEMVDMISHQRQFELQVKLMKTAEDLDR 238

Query: 236 E 236
            
Sbjct: 239 S 239


>gi|145298492|ref|YP_001141333.1| flagellar basal body rod protein FlgF [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142851264|gb|ABO89585.1| flagellar basal body rod protein FlgF [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 248

 Score =  142 bits (358), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 52/240 (21%), Positives = 101/240 (42%), Gaps = 10/240 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     I ++        L+   +N++N +TVGF++   +   +      +      F  
Sbjct: 1   MDHMLYIAMSGAKENMNSLAVRGNNLANANTVGFKSDFEQARSM--QAFGEGLPSRVFAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119
           + +   + + G  ++TG +LD A++G  W A++ P+G    TR G  +++  G+L +++G
Sbjct: 59  TERPGQNLQHGMLMTTGRDLDVAVDGQGWIAVQDPKGGEAYTRMGNLQLSATGNLQTSTG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD------MSQGFVRRE 173
              V D    PI +P   E   +   G IS + +  A               +   V + 
Sbjct: 119 LNVV-DDGGQPIVLPLPMEKIEINRDGTISGRPEGAAANLPEDFQRIKLVKPAADAVEKG 177

Query: 174 NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
             G+            + V +  G LE SN N + EM  +I L ++F +   ++   E++
Sbjct: 178 QDGLFRRKDGQNEAASATVGLIAGSLEGSNVNVVDEMTNLIRLQRQFETQVKIMKTAEEN 237


>gi|163738061|ref|ZP_02145477.1| hypothetical protein RGBS107_06604 [Phaeobacter gallaeciensis
           BS107]
 gi|161388677|gb|EDQ13030.1| hypothetical protein RGBS107_06604 [Phaeobacter gallaeciensis
           BS107]
          Length = 238

 Score =  142 bits (357), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 63/241 (26%), Positives = 117/241 (48%), Gaps = 6/241 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    L+ Q  L + +  VA+N++N+ T G+R   V FSE + +      + +S   
Sbjct: 1   MGDTGYTTLSRQSGLMREMRVVANNIANSATTGYRAEGVIFSEFIQSAPGQ--ESLSMGR 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           +     S   G+   +G +LD A+EGD +F +E+P G  LTR G F     G LV+  G 
Sbjct: 59  ANIRNTSMAQGALTQSGGDLDLAIEGDGYFMVETPMGERLTRSGAFSTNAQGDLVTMDGH 118

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
              LD    P+ IP   +    G  G +S  G+ +  +G++  + +   +R +      +
Sbjct: 119 RV-LDAGRAPVFIPGDAKSIKFGADGTLSADGRALGQIGIFKPEENYQMIREDGVMFRVD 177

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
                +ED     V +GFLE SN N++ ++ +M+ + + +    + ++  ++ +  AI+N
Sbjct: 178 GE---IEDAGDARVLQGFLEGSNVNAISQLARMVEIQRAYEMGQSFLETEDQRVRNAIKN 234

Query: 241 I 241
           +
Sbjct: 235 L 235


>gi|222100100|ref|YP_002534668.1| Flagellar basal-body rod protein FlgF [Thermotoga neapolitana DSM
           4359]
 gi|221572490|gb|ACM23302.1| Flagellar basal-body rod protein FlgF [Thermotoga neapolitana DSM
           4359]
          Length = 252

 Score =  142 bits (357), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 51/255 (20%), Positives = 96/255 (37%), Gaps = 24/255 (9%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-------------- 48
                     L    +L  +A++++N DT G++  +  F   +                 
Sbjct: 6   RGIYNASMGMLIDMAKLDRIANDLANVDTAGYKQDREAFRAYLRREIFRQEPDPIEKRVE 65

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
           K  I      V   +       G    T      A++G+ +F +E       TR+G F+V
Sbjct: 66  KVPIGPLEYAVVLDEVRSDLSQGPLEETKVPYHLAIDGEGFFRIEFNGQEYFTRNGEFEV 125

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
              G +V+  G Y  LD     I+      +   G      + G VI  +G+Y+V+  Q 
Sbjct: 126 GSGGYIVTNYGGYL-LDENGERIEYFDGFTVDGEGYV--RDENGNVITRIGVYTVENPQK 182

Query: 169 FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228
           F     +G +P+             + +G++E SN N++  M  MI   + +      + 
Sbjct: 183 FGNTLFTGENPS-------PTENFRILQGYVEKSNVNALKAMVDMISAMRHYELSQRAVL 235

Query: 229 ENEKSMLEAIRNIAS 243
            N++   + I ++A+
Sbjct: 236 VNDELNGKLINSLAT 250


>gi|1870712|gb|AAB48836.1| FlgF [Sinorhizobium meliloti]
          Length = 240

 Score =  142 bits (357), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 94/230 (40%), Positives = 137/230 (59%), Gaps = 6/230 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           MQT   + L++Q+ALE+RL+T+ADN++N++TVGFR  +VKF++V+     D         
Sbjct: 1   MQTGLYVALSSQMALEKRLNTLADNIANSNTVGFRATEVKFNQVL----GDTKPTKVSYV 56

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           S  E         + TG+ LDFA++GDAWF++++P G  LTRDGRF +T+ G LV+  G 
Sbjct: 57  SEGEEFLSTKTGALRTGSALDFAIKGDAWFSIDTPGGPALTRDGRFTLTETGELVTIKGY 116

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
            PVLD    PIQ+        VG  G I Q G     +GLY  D S+GF+R +NS + P 
Sbjct: 117 -PVLDAGGPPIQLNGGAGEIAVGADGAIHQNGVQTCLLGLYEADFSKGFMRYDNSSVMPA 175

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
             P   +    V V +GFLE+SN N + EM Q+I +T+ F+++T L+   
Sbjct: 176 AQPNRRDR-FDVGVMQGFLEESNVNGIQEMSQLIMITRAFDNVTALMRAT 224


>gi|299534778|ref|ZP_07048108.1| flagellar basal-body rod protein flgG [Lysinibacillus fusiformis
           ZC1]
 gi|298729866|gb|EFI70411.1| flagellar basal-body rod protein flgG [Lysinibacillus fusiformis
           ZC1]
          Length = 322

 Score =  142 bits (357), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 53/319 (16%), Positives = 95/319 (29%), Gaps = 80/319 (25%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-------- 52
           M  S   G++     + +L  + +N++N +T+GF+  +V F +++   +           
Sbjct: 1   MLRSMYSGISGLKNFQTKLDVIGNNIANVNTIGFKKGRVNFKDLMSQTQAGASAATATRG 60

Query: 53  ----DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP------------- 95
                Q                GS   TG  LD  +EGD +F +                
Sbjct: 61  GVNPQQVGLGAQLAAIDTIHGGGSLQGTGRGLDLGIEGDGFFMVADANGAPDPDSGFIDE 120

Query: 96  ---RGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEIS--- 149
                 + TR+G F +  +G LV+A GKY V   A   I +   D+  N       S   
Sbjct: 121 EGFNNTLFTRNGVFYMDSNGYLVNADGKYLVGVSAGDEIVMEADDDGINPENAPIASGDE 180

Query: 150 --------------------------------------------QKGKVIATMGLYSVDM 165
                                                          K    + +     
Sbjct: 181 GANLFDDDGVLAPDAGDVGPIRIPTTAKEISIGPNGTIEYVDLNGNRKWAGQLIMAKFPN 240

Query: 166 SQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
           + G  +   +                       V  G +E SN +   E  +MI   + F
Sbjct: 241 AGGLAKVGGNYYQQTANSGAAYAQVATVAGMGKVVPGTVEMSNVDLSEEFTEMIVAQRGF 300

Query: 221 NSITTLIDENEKSMLEAIR 239
            + T +I  +++ + E + 
Sbjct: 301 QANTRIITTSDEVLQELVN 319


>gi|269103189|ref|ZP_06155886.1| flagellar basal-body rod protein FlgF [Photobacterium damselae
           subsp. damselae CIP 102761]
 gi|268163087|gb|EEZ41583.1| flagellar basal-body rod protein FlgF [Photobacterium damselae
           subsp. damselae CIP 102761]
          Length = 249

 Score =  142 bits (357), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 54/241 (22%), Positives = 93/241 (38%), Gaps = 11/241 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  + +         L   A+N++N  T GFR    +   +      +      F  
Sbjct: 1   MDRALYLAMNGAQQDMLGLQVRANNLANVSTTGFRADLEQARSM--QAYGEGVPDRVFTM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           + +   +   GS I+TG +LD A+EGD W A++        TR G  K+   G L +++G
Sbjct: 59  AERPGYNFTQGSVITTGRDLDVAVEGDGWLAVQDASGNEAYTRAGHLKIDQTGMLQNSNG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172
           +   L     PI IP       +G  G IS   +      +  +D        +    + 
Sbjct: 119 QLV-LGQNDSPIFIPLPISKIEIGRDGTISVLPQGAPPEAMAQIDRIKLVKTDNHQLFKD 177

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            +          P +  + + +  G LE SN N++ EM  +I L + F     L+   E+
Sbjct: 178 ADGLFKFKGGQEPQQADASIRLLNGTLEGSNVNAVGEMTALIDLQRHFEMQVKLMKTAEE 237

Query: 233 S 233
            
Sbjct: 238 M 238


>gi|197335019|ref|YP_002156699.1| flagellar basal-body rod protein FlgF [Vibrio fischeri MJ11]
 gi|197316509|gb|ACH65956.1| flagellar basal-body rod protein FlgF [Vibrio fischeri MJ11]
          Length = 249

 Score =  142 bits (357), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 55/241 (22%), Positives = 99/241 (41%), Gaps = 11/241 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  + ++      Q +   ++N++N  T GFR    +   +      +      F  
Sbjct: 1   MDRALFLAMSGAKQNMQAMQLRSNNLANVSTTGFRADLEQARSM--QAYGEGLPTRVFNM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           + +   S   GS I+TG +LD  +EGD W ++        LTR G  K+ + G L++ SG
Sbjct: 59  TERPGSSFSQGSVITTGRDLDLTIEGDGWISVMDNTGREGLTRAGNLKIDETGLLMNGSG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172
            + VL     PI +P       + + G IS   +      +  VD        ++   + 
Sbjct: 119 -HLVLGENDAPITLPLPIAKIQIAKDGTISVLEQGAPAEAMAEVDRIKLVKTDNRDLFKD 177

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            N       P    +  + +T+  G LE SN N++ EM  +I L ++F     ++   E+
Sbjct: 178 TNGLFRSKNPGATFDADANITLLSGALEGSNVNAVGEMTNLIDLQRQFEMQVKMMSTAEE 237

Query: 233 S 233
            
Sbjct: 238 M 238


>gi|160896078|ref|YP_001561660.1| flagellar basal-body rod protein FlgF [Delftia acidovorans SPH-1]
 gi|160361662|gb|ABX33275.1| flagellar basal-body rod protein FlgF [Delftia acidovorans SPH-1]
          Length = 246

 Score =  142 bits (357), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 55/244 (22%), Positives = 90/244 (36%), Gaps = 5/244 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       +    A  QR S +A N++N  T GFR     F  V   ++        F  
Sbjct: 1   MDRIIYTSMTGANAAAQRQSVLAHNLANAGTNGFRAEMSTFRSV--PLQGSGAGTRVFAL 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119
                     G    TG  LD    G AWFA++        TR+G F+V+ +G LV+++G
Sbjct: 59  EATSGYVDTPGPTQRTGRALDAMAMGRAWFAVQGLDGQEAYTRNGVFEVSPEGQLVNSNG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS--QGFVRRENSGI 177
           +  + D        P+                 ++   +G   +        + R N G+
Sbjct: 119 QAVLSDGGGPIDIPPESTITLGSDGTLTAKTGNQLPVAVGRVKLATPPEDTALVRGNDGL 178

Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                  PL +     +  G +E SN NS+  M  MI   ++F +   L+   E +   A
Sbjct: 179 FRTGDGDPLPNDENARLLSGAIEGSNVNSVETMVGMIAAARQFETQMRLLQTAETNDKTA 238

Query: 238 IRNI 241
            + +
Sbjct: 239 SQLL 242


>gi|261253613|ref|ZP_05946186.1| flagellar basal-body rod protein FlgF [Vibrio orientalis CIP
           102891]
 gi|260937004|gb|EEX92993.1| flagellar basal-body rod protein FlgF [Vibrio orientalis CIP
           102891]
          Length = 249

 Score =  142 bits (357), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 56/241 (23%), Positives = 98/241 (40%), Gaps = 11/241 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  + ++      Q L   A+N++N  T GFR    +   +      +      F  
Sbjct: 1   MDRALFLAMSGAKQNMQALQLRANNLANVSTTGFRADLAQARSM--QAYGEGVPSRVFSM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASG 119
           + +   + + GS I+TG +LD  ++GD W ++ +      LTR+G   V  +G L++   
Sbjct: 59  TERPGHNFQQGSVITTGRDLDVTIQGDGWISVLDQTGKEGLTRNGNLNVDVNG-LLTNGN 117

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172
            + VL     PI +P       +G  G IS   +      +  VD        +Q   + 
Sbjct: 118 GHLVLGETGAPITLPIPVSKVEIGNDGTISVVPQGAPADAIEVVDRIKLTRTNNQSLFKD 177

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            N       P T  E  + V +  G +E SN N++ EM  +I L ++F     ++   E 
Sbjct: 178 INGLFRAKDPNTAYEADADVKLLTGAIEGSNVNAIGEMTSLIDLQRQFEMQVKMMSTAED 237

Query: 233 S 233
            
Sbjct: 238 M 238


>gi|117619148|ref|YP_857342.1| flagellar basal-body rod protein FlgF [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117560555|gb|ABK37503.1| flagellar basal-body rod protein FlgF [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 248

 Score =  142 bits (357), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 51/240 (21%), Positives = 103/240 (42%), Gaps = 10/240 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     I ++        L+  ++N++N +T GF++   +   +      +      F  
Sbjct: 1   MDHLLYIAMSGAKESMNSLAVRSNNLANANTTGFKSDFEQARSM--QAFGEGLPTRVFAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119
           + +   + + G  ++TG +LD A++G  W A++ P+G    TR G  +++  G+L +++G
Sbjct: 59  AERPGQNLQHGMLMTTGRDLDVAVDGQGWIAVQDPKGGEAYTRMGNLQLSATGNLQTSTG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV------DMSQGFVRRE 173
              V D    PI +P   E   +   G IS + +  A     +       + +   V + 
Sbjct: 119 LNVV-DDGGQPIVLPLPMEKIEINRDGTISGRPEGAAANLPENFQRIKLVNPAVDAVEKG 177

Query: 174 NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
             G+            + V +  G LE SN N + EM  +I L ++F +   ++   E++
Sbjct: 178 QDGLFRRKDGQNEAASATVGLIAGSLEGSNVNVVDEMTNLIRLQRQFETQVKIMKTAEEN 237


>gi|304392511|ref|ZP_07374451.1| flagellar basal-body rod protein FlgF [Ahrensia sp. R2A130]
 gi|303295141|gb|EFL89501.1| flagellar basal-body rod protein FlgF [Ahrensia sp. R2A130]
          Length = 250

 Score =  141 bits (356), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 80/242 (33%), Positives = 138/242 (57%), Gaps = 2/242 (0%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-KNDIDQKISFVA 60
           +T  ++ L++QLALE+RL T+ADN++N+ TVGFR   V+F+E+   +   D  Q  SF +
Sbjct: 7   ETGLSVSLSSQLALERRLGTLADNVANSGTVGFRATHVRFAEIEQRVTGGDESQTTSFAS 66

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
            G+  LS   G+ + TG  LD A++G+ WFAL+   G I+TRDGRF++  +G L S +G 
Sbjct: 67  RGRSVLSPTAGTLVETGARLDVAIKGEGWFALQGAAGKIMTRDGRFQMDAEGQLRSVNGD 126

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
              LD    P+ +        +G  G I Q G+ +  +GLY+ D     VR   SGI   
Sbjct: 127 EV-LDPGGAPLALNVAAGPPTIGSDGSIVQNGQQVGAIGLYAFDPGTDPVRIGTSGILAQ 185

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
             P  L D    +V +G++E +N + + EM  +I + + F+++  ++ +++ ++ + ++ 
Sbjct: 186 GAPVALVDGDAPSVLQGYVEQANVDPVREMTNLITIHRTFDNVAAMVRKSDAALEKMMQI 245

Query: 241 IA 242
           + 
Sbjct: 246 LG 247


>gi|323136553|ref|ZP_08071634.1| fagellar hook-basal body protein [Methylocystis sp. ATCC 49242]
 gi|322397870|gb|EFY00391.1| fagellar hook-basal body protein [Methylocystis sp. ATCC 49242]
          Length = 240

 Score =  141 bits (356), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 73/242 (30%), Positives = 134/242 (55%), Gaps = 4/242 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M ++F + L++Q+ L++RL+T+A N++N+ T+G+R   V F  V+           +F +
Sbjct: 1   MHSAFYVSLSSQITLDKRLTTIAANVANSSTIGYRATGVSFDTVMSKT---SPYVTNFPS 57

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           +G +Y+S+  G    T   LD A+ GDAWFA+ +P+G+  TRDGR ++ + G + +  G 
Sbjct: 58  TGVDYISRSSGGLTKTDNPLDVAVIGDAWFAIRTPQGVAYTRDGRMRMMETGDIQTILGY 117

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
            PVLD  + PI++        +   G I+Q  + +  +GL+ +D +    R ENS + P+
Sbjct: 118 -PVLDAGNSPIKLDPTLGPPMIYRDGMITQGDRQVGAIGLFEIDGNATLQRGENSSVIPS 176

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
            P  P+ + +   + +G LE++N N + E+ ++I   + F S +   D  + S   A+R 
Sbjct: 177 TPAIPVTNFTQNGMAQGHLENANVNPVSEITKLIMAHRSFESASASYDMMDNSQRAAVRT 236

Query: 241 IA 242
           + 
Sbjct: 237 LG 238


>gi|253574271|ref|ZP_04851613.1| flagellar basal body rod protein [Paenibacillus sp. oral taxon 786
           str. D14]
 gi|251846748|gb|EES74754.1| flagellar basal body rod protein [Paenibacillus sp. oral taxon 786
           str. D14]
          Length = 300

 Score =  141 bits (356), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 50/297 (16%), Positives = 105/297 (35%), Gaps = 55/297 (18%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKND------ 51
           M        +  +A ++R  TV  N++N +T G++++      F E++ ++  D      
Sbjct: 1   MLRGLYTAASGMIAEQRRHDTVTQNIANLNTPGYKSVNTVARSFPEMLISLMGDKQSGNN 60

Query: 52  --IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA--------------------- 88
             I + ++ V + +   +   G    TG   DFAL  +                      
Sbjct: 61  KQIGKLVTGVFAEESLPAFTQGDLKETGKNTDFALISELSLENPETGGPYAFDASGKFVT 120

Query: 89  ------------WFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQK 136
                       +   ++   +  TRDG F V   G L +++G   +    +  I     
Sbjct: 121 EDGEVIYQPQAFFAVEDNEGNVRYTRDGSFTVNAAGELRTSTGFRVLDTGGNPIILDAGL 180

Query: 137 DEIFNVGEKG------EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP----- 185
                  ++       + +     + T+G+  V+     VR  N                
Sbjct: 181 SVDTLTSDEAGNLTAVDNTGALVDLGTLGITVVEQPYQLVREGNGVFRVADEEAAGVREL 240

Query: 186 LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           +    G  V++G+LE SN ++   M  ++   + + S   +I   ++S+ +A+  I 
Sbjct: 241 VPGTDGAVVRQGYLEVSNVDTAQSMVDLLAAQRAYESNQKIIQYYDRSLDKAVNEIG 297


>gi|253682153|ref|ZP_04862950.1| flagellar basal body rod protein FlgG [Clostridium botulinum D str.
           1873]
 gi|253561865|gb|EES91317.1| flagellar basal body rod protein FlgG [Clostridium botulinum D str.
           1873]
          Length = 262

 Score =  141 bits (356), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 49/261 (18%), Positives = 98/261 (37%), Gaps = 20/261 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S     +   A   +L  +++NM+N+ TVG++ + VKF++++    + +        
Sbjct: 1   MLRSIWNSRSGMAAEMDKLDAISNNMANSTTVGYKRVDVKFNDLMQENLDRLGYPVSKGQ 60

Query: 56  ------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKV 108
                    V S +       G+ + T    D A++G  +F +       + TR G F +
Sbjct: 61  GKLQVTGGGVKSTEIERDNAQGNLLQTNNNTDLAIDGKGYFKVVDGEGRTLYTRGGSFNI 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQK----DEIFNVGEKGEISQKGKVIATMGLYSVD 164
              G++V  +G   V+   +       +     E FNV E G +         + +Y   
Sbjct: 121 DPSGTVVDKNGNRLVILNENGIDVNTGRAGFTKESFNVSEDGYLRSDKHRGLRIPIYDTI 180

Query: 165 MSQGFVRRENSGISPNIPPTPLE---DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221
                     +  +P I         +    ++ +GF E SN +   EM  +I   + F 
Sbjct: 181 GDNSMKSIGENLYTPLIQGNGRNDVIESKDFSLLQGFTEQSNVDLGKEMTDLIVTQRAFQ 240

Query: 222 SITTLIDENEKSMLEAIRNIA 242
             ++ +   ++ M     N+ 
Sbjct: 241 LNSSALKTADE-MWGMANNLR 260


>gi|28211323|ref|NP_782267.1| flagellar hook protein flgE [Clostridium tetani E88]
 gi|28203763|gb|AAO36204.1| flagellar hook protein flgE [Clostridium tetani E88]
          Length = 365

 Score =  141 bits (356), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 50/339 (14%), Positives = 96/339 (28%), Gaps = 100/339 (29%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G++   A + +L  + +N++N +T  F+  +++F +V+               
Sbjct: 24  MLRSMFSGISGLKANQTKLDVIGNNIANVNTTAFKNQRIRFQDVLSQNLKFGTGASANVG 83

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI---------- 98
             +  Q    V           G+   TG  LDFA++GD +F +   +            
Sbjct: 84  GTNPSQVGLGVEVAGIDTVVSQGNMQPTGRNLDFAVDGDGYFVVARGKQEGKIEIEKDDE 143

Query: 99  --------------ILTRDGRFKVTDDGSLVSASGKYP---------------------- 122
                           TRDG F + D G L+++ G                         
Sbjct: 144 AKKGEVKASDGLEVHYTRDGSFGLDDFGQLLTSDGYRVLGYVPKGTTIKYADGKPVLEVN 203

Query: 123 ----VLDMASVPIQIPQKDEIFNVGEKGEISQKGK------------------------- 153
                         +        V   G     GK                         
Sbjct: 204 PKEQEGGAKVEENDLKPLAIPDKVIYNGAGKDHGKAMTIKNFSVDKNGAINAVLANNEVV 263

Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTP-------------LEDLSGVTVKRGFLE 200
            I  +G+     S G  +   +  S                      +     + +G LE
Sbjct: 264 TIGQIGMADFKNSAGLYKEGKNLYSGTASSGDAIYRLGTDPTNDKSNEKGYGDIIQGRLE 323

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            SN +   +  +MI  ++ F +   +I   ++ + + + 
Sbjct: 324 MSNVDLAEQFTEMIVASRAFQANGKIITTGDEILQDLVN 362


>gi|240144761|ref|ZP_04743362.1| flagellar basal-body rod protein FlgG [Roseburia intestinalis
           L1-82]
 gi|257203282|gb|EEV01567.1| flagellar basal-body rod protein FlgG [Roseburia intestinalis
           L1-82]
 gi|291534609|emb|CBL07721.1| fagellar hook-basal body proteins [Roseburia intestinalis M50/1]
 gi|291540626|emb|CBL13737.1| fagellar hook-basal body proteins [Roseburia intestinalis XB6B4]
          Length = 264

 Score =  141 bits (356), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 55/264 (20%), Positives = 106/264 (40%), Gaps = 24/264 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVV---------GAI 48
           M           +  + RL  +++N++N DT G++        F++ +           +
Sbjct: 1   MVKGLYTAYTGMINEQNRLDILSNNLANADTNGYKKEGATNQTFADELAIKIKDTSSYGM 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-----PRGIILTRD 103
              +      V  G+ Y     G+F  T    DFAL+GD +FA+          +  +RD
Sbjct: 61  PQKLGTMSMGVHIGETYTDYSQGNFRVTDNATDFALDGDGFFAIAYTDKAGNTSVKYSRD 120

Query: 104 GRFKVTDDGSLVSASGKYP-----VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158
           G F V   G LV+  G Y       ++  +        +    V EKG I Q  + + T+
Sbjct: 121 GAFVVNTAGYLVTKDGDYVLNQNGAMNADAGARIQVDPNVPITVDEKGNIFQNNQQVGTI 180

Query: 159 GLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
           G+  +       +   +    ++        S   V +G +E SN N + EM  MI +++
Sbjct: 181 GVVDIADYNYLAKYGENMY--DLVNGGARQASTAKVTQGCIESSNINVVSEMVNMITISR 238

Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242
            F +   +I+  ++++ +A+  + 
Sbjct: 239 AFQAGQKVINAVDETLDKAVNQVG 262


>gi|237752809|ref|ZP_04583289.1| flagellar basal-body rod protein flgG [Helicobacter winghamensis
           ATCC BAA-430]
 gi|229376298|gb|EEO26389.1| flagellar basal-body rod protein flgG [Helicobacter winghamensis
           ATCC BAA-430]
          Length = 277

 Score =  141 bits (356), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 57/275 (20%), Positives = 110/275 (40%), Gaps = 32/275 (11%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG-------------- 46
           MQ  +   +   +    RL  +A+N++N +T GF+   V   + +               
Sbjct: 1   MQGGYYNSVGGMVTQINRLDVIANNIANANTTGFKRDDVVIGDFMRLYEQHKEFLPIDEQ 60

Query: 47  ---AIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFAL-EGDAWFALESPRGIILTR 102
              A +             +EY   +VG  + T    DFAL + + +F +E+P GI  TR
Sbjct: 61  TKDAAQFYNRSLNRVPQIVEEYTDNKVGGMMITDNTFDFALSKENMYFMVETPDGIRYTR 120

Query: 103 DGRFKVTDDGSLVSASGKYPVLDMA-----------SVPIQIPQKDEIFNVGEKGEISQK 151
           DG F + + G LV+  G   +                  +++     I+      E   +
Sbjct: 121 DGSFVLNEQGRLVTKEGYPVLPREYLDAPQYIEFIDGFQVEVDSNGNIYTRDLNNEGISE 180

Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL--SGVTVKRGFLEDSNANSMYE 209
             ++A +G+ S +  +   +  ++  S     T   +       V++GFLE SN N + E
Sbjct: 181 MALMANIGVVSFENPKYLKKIGDNLYSYPQERTDEREALERSGAVRQGFLEKSNINVVQE 240

Query: 210 MGQMIHLTQKFNSITTLIDEN-EKSMLEAIRNIAS 243
           M  +I   +   + + ++  + ++   EAI  +A+
Sbjct: 241 MTGLIETNRLVEAYSKVLKTHMDELNTEAITKLAA 275


>gi|187925760|ref|YP_001897402.1| flagellar basal body rod protein FlgF [Burkholderia phytofirmans
           PsJN]
 gi|187716954|gb|ACD18178.1| flagellar basal-body rod protein FlgF [Burkholderia phytofirmans
           PsJN]
          Length = 252

 Score =  141 bits (356), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 54/249 (21%), Positives = 98/249 (39%), Gaps = 9/249 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI----DQKI 56
           M       ++      ++ + VA+N++N  T GFR     F  V  +  +      +   
Sbjct: 1   MDRLIYTAMSGSTQALEQQAIVANNLANASTTGFRAQLATFRAVPMSFGDGSSINDNTTR 60

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLV 115
           +FV S         G    TG  LD A++G  W A+++   G   TR G   V ++G LV
Sbjct: 61  TFVLSSTPGADYTPGPIQQTGNPLDVAIQGPGWLAVQTADGGEAYTRAGNLHVDENGQLV 120

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRR 172
           +A+ +  + +   V +    +  I   G    ++      A + +     V+     + R
Sbjct: 121 NATNQVVLGNGGPVSVPPGAEITIGKDGTVSALTPGDPPTAVVTVDQLKLVNPDPQTMTR 180

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            + G+         +    VT+    LE SN N +  M  MI   ++F   T L++  +K
Sbjct: 181 GDDGLFRTADGNAADADPAVTLAPASLEGSNVNPVSAMVSMITNARQFQMQTKLLESADK 240

Query: 233 SMLEAIRNI 241
           +   A   +
Sbjct: 241 NDQSA-NQL 248


>gi|296103610|ref|YP_003613756.1| Flagellar basal-body rod protein FlgF [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295058069|gb|ADF62807.1| Flagellar basal-body rod protein FlgF [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 245

 Score =  141 bits (356), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 50/246 (20%), Positives = 91/246 (36%), Gaps = 10/246 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    ++A  A   R +  ++N++N+ T GFR     F  V   I+ +  +  + VA
Sbjct: 1   MDRAIYTAMSAANAALNRQAVTSNNLANSSTAGFRAQLAAFRSV--PIEGETLRTRALVA 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASG 119
               +    +G    TG  LD AL  D W A+         TR+G  +V  DG  V +  
Sbjct: 59  ESTPFHDTTMGPITHTGRSLDVALPQDGWLAVALDDGSEGYTRNGAIEVDQDG--VLSVN 116

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEK----GEISQKGKVIATMGLYSVDMSQGFVRRENS 175
             P++         PQ              G       ++    L  V+     +   + 
Sbjct: 117 GRPLMGDGGPLEVPPQSHVTIGSDGTVSALGMGDDPTMLVPVGRLKLVNADMNSLVHGDD 176

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
           G+        L     + +    +E SN + +  M QMI  ++ F+    +I   +++  
Sbjct: 177 GLFRTAGGEMLAQDETLRLTPEAIEGSNVSPVQAMTQMIANSRGFDMNMKVIRTADENAQ 236

Query: 236 EAIRNI 241
           +A   +
Sbjct: 237 KA-NQL 241


>gi|289208115|ref|YP_003460181.1| flagellar basal-body rod protein FlgF [Thioalkalivibrio sp. K90mix]
 gi|288943746|gb|ADC71445.1| flagellar basal-body rod protein FlgF [Thioalkalivibrio sp. K90mix]
          Length = 246

 Score =  141 bits (356), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 54/246 (21%), Positives = 91/246 (36%), Gaps = 6/246 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     I ++         S    N++N +T GFR      + V   ++  +     +  
Sbjct: 1   MDRFLYIAMSGAKETMHAQSVNNHNLANANTDGFRQALANANTV--PVRGPVFDSRDYAQ 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
            G +      G   STG +LD A+E   + A++ P      TR G   V   G L +A G
Sbjct: 59  LGTDGTDFSKGQMQSTGRDLDIAIEDQGFIAVQGPDGEEGYTRAGSLHVDAFGLLRTAQG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQ---KGKVIATMGLYSVDMSQGFVRRENSG 176
              + D   + I   +K EI   G      Q      + A   +  V+     + R + G
Sbjct: 119 HQVLGDGGPIAIPPSEKIEIGTDGTISVRPQGVGPEALAAIERIRLVNPDVNELERGDDG 178

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           +            + V V  G LE SN N++  + +MI L++ F     ++D        
Sbjct: 179 LFRMADGGEAPPDAEVRVVSGMLEGSNVNTVEALTRMIELSRHFEMQVKMMDSANTLEQS 238

Query: 237 AIRNIA 242
           + R + 
Sbjct: 239 SNRLLG 244


>gi|148258452|ref|YP_001243037.1| putative flagellar basal-body rod protein flgF [Bradyrhizobium sp.
           BTAi1]
 gi|146410625|gb|ABQ39131.1| putative flagellar basal-body rod protein flgF [Bradyrhizobium sp.
           BTAi1]
          Length = 246

 Score =  141 bits (356), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 62/240 (25%), Positives = 110/240 (45%), Gaps = 14/240 (5%)

Query: 7   IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA-----IKNDIDQKISFVAS 61
           I L+  +AL++RL   A+N++N+ T G+R  ++ F E +       I    ++ +S V +
Sbjct: 8   ISLSRLMALQRRLDVAANNVANSQTTGYRAKQLAFQEYLKPDKPPEIGEKPERPLSLVDA 67

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
              + S   G+F STG  LD A+ G+A+FA+++ +G   TRDG F +   G LV+  G  
Sbjct: 68  ALPFTSSASGAFRSTGNPLDLAINGNAYFAIQTSQGERYTRDGSFSLDAKGRLVTLEGLP 127

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
            + D     I +P +     +   G +S +   +  + L S D          + +    
Sbjct: 128 VLGD--KGVITVPPRAGEITIDPSGRVSMQQVELGKLKLVSFDPGARLEAAGGNLLRSAQ 185

Query: 182 PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           P  P  +    TV +  LE SN     EM ++  L + +   + L+ +++      I  I
Sbjct: 186 P--PKANAGSATVLQAMLEQSNVQPTIEMSRLAELNRSYEVASKLLKDSQD-----INEI 238


>gi|331269339|ref|YP_004395831.1| flagellar basal-body rod protein FlgG [Clostridium botulinum
           BKT015925]
 gi|329125889|gb|AEB75834.1| flagellar basal-body rod protein FlgG [Clostridium botulinum
           BKT015925]
          Length = 262

 Score =  141 bits (355), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 47/267 (17%), Positives = 99/267 (37%), Gaps = 32/267 (11%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S     +   A   +L  +++NM+N+ TVG++ + VKF++++    + +        
Sbjct: 1   MLRSIWNSRSGMAAEMDKLDAISNNMANSTTVGYKRVDVKFNDLMQENLDRLGYPVSKGQ 60

Query: 56  ------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKV 108
                  S V S +       G+ + T    D A++G  +F +         TR G F +
Sbjct: 61  GKRQVTGSGVKSTELERDNAQGNLLQTNNNTDLAIDGKGYFKVVDGTGRTFYTRGGSFNI 120

Query: 109 TDDGSLVSASGKYPVLDMAS-------------VPIQIPQKDEIFNVGEKGEISQKGKVI 155
              G++V  +G   V+   +                ++ +   I++   +G        I
Sbjct: 121 DPSGTVVDKNGNKLVILNENGTDVNKTGAGFTKDSFKVSEDGYIWSDKHRGFRIPIYDTI 180

Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIH 215
               + S+   +        G   N     + +    ++ +GF E SN +   EM  +I 
Sbjct: 181 GDNSMKSIG--ENLYVPLTQGNGRND----VIESKDFSLLQGFTEQSNVDLGKEMSDLII 234

Query: 216 LTQKFNSITTLIDENEKSMLEAIRNIA 242
             + F   ++ +   ++ M     N+ 
Sbjct: 235 TQRAFQLNSSALKTADE-MWGMANNLR 260


>gi|313200562|ref|YP_004039220.1| flagellar basal-body rod protein flgf [Methylovorus sp. MP688]
 gi|312439878|gb|ADQ83984.1| flagellar basal-body rod protein FlgF [Methylovorus sp. MP688]
          Length = 246

 Score =  141 bits (355), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 55/243 (22%), Positives = 101/243 (41%), Gaps = 6/243 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       ++    + ++ +T A N++N  + GF+     F  V   I ++     +FV 
Sbjct: 1   MDRMIYTAMSGAKHILEQQATTAHNLANATSTGFKAQVDSFRAV--PIVSEGLPTRAFVI 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119
                     G+ I T  +LD A++G  W A++        TR+G  KV ++G L +A G
Sbjct: 59  DTTVATDFTPGTIIGTSRDLDIAIQGRGWIAVQRLDGSEAYTRNGSLKVNENGILQTADG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176
              + D   + I   ++  I   G    +S+      T  +     V+  +  + R   G
Sbjct: 119 LTVLGDGGPITIPPDERIAIGKDGTVSTVSRVTVPSPTNIVGRIKLVNPDESTLVRGTDG 178

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           +       P +  + + V  G LE SN N +  M  MI L ++F +   L++  E +  +
Sbjct: 179 LFSTQNGQPAQADANIQVASGALEGSNVNVVDAMVNMISLARQFETQMKLLENAENNANK 238

Query: 237 AIR 239
           A +
Sbjct: 239 ASQ 241


>gi|115353117|ref|YP_774956.1| flagellar basal body rod protein FlgF [Burkholderia ambifaria AMMD]
 gi|170703097|ref|ZP_02893917.1| flagellar basal-body rod protein FlgF [Burkholderia ambifaria
           IOP40-10]
 gi|115283105|gb|ABI88622.1| flagellar basal-body rod protein FlgF [Burkholderia ambifaria AMMD]
 gi|170131994|gb|EDT00502.1| flagellar basal-body rod protein FlgF [Burkholderia ambifaria
           IOP40-10]
          Length = 252

 Score =  141 bits (355), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 50/249 (20%), Positives = 89/249 (35%), Gaps = 9/249 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS--- 57
           M       +        + + VA+N++N  T GFR     +  V     +      +   
Sbjct: 1   MDRLIYTAMTGASQSLDQQAIVANNLANASTTGFRAQLATYRAVPMNFGDGSTSDPTTTR 60

Query: 58  -FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLV 115
            +V +         G    TG  LD A++G  W A+++       TR G   V ++G LV
Sbjct: 61  TYVLASTPGADYAPGPITRTGNPLDVAVQGAGWLAVQTADGSEAYTRAGNLHVDENGQLV 120

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT---MGLYSVDMSQGFVRR 172
           +AS    + +   + +    +  I   G    +       A      +  V+     + R
Sbjct: 121 NASNLPVIGNGGPISVPPNAEVTIGKDGTVSALMPGDPPTAVAIVDQMKLVNPDPATLAR 180

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            N G+       P +    V V    LE SN N +  M  MI   + F   + LI   ++
Sbjct: 181 GNDGLFRTADGNPADSDPSVVVTPNSLEGSNVNPVTAMVAMIDNARAFQLQSKLIQTADQ 240

Query: 233 SMLEAIRNI 241
           +  ++   +
Sbjct: 241 N-EQSANQL 248


>gi|325529015|gb|EGD06028.1| flagellar basal body rod protein FlgF [Burkholderia sp. TJI49]
          Length = 252

 Score =  141 bits (355), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 51/249 (20%), Positives = 89/249 (35%), Gaps = 9/249 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----DIDQKI 56
           M       +        + + VA+N++N  T GFR     +  V     +    D     
Sbjct: 1   MDRLIYTAMTGASQSLDQQAIVANNLANASTTGFRAQLATYRAVPMNFGDGSTVDPTTTR 60

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLV 115
           ++V +         G    TG  LD A++G  W +++ +      TR G   V  +G LV
Sbjct: 61  TYVLASTPGADFAPGPITRTGNPLDVAVQGAGWLSVQLADGSEAYTRAGNLHVDQNGQLV 120

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT---MGLYSVDMSQGFVRR 172
           +AS    V +   + +    +  I   G    +       A      +  V+     + R
Sbjct: 121 NASNLPVVGNGGPISVPPNAEVTIGKDGTVSALMPGDPPTAVAIVDQMKLVNPDPATLTR 180

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            N G+       P +    V V    LE SN N +  M  MI   + F   + LI   ++
Sbjct: 181 GNDGLFRTADGNPADADPNVVVTPNSLEGSNVNPVTAMVAMIDNARAFQLQSKLIQTADQ 240

Query: 233 SMLEAIRNI 241
           +  ++   +
Sbjct: 241 N-EQSANQL 248


>gi|253998487|ref|YP_003050550.1| flagellar basal-body rod protein FlgF [Methylovorus sp. SIP3-4]
 gi|253985166|gb|ACT50023.1| flagellar basal-body rod protein FlgF [Methylovorus sp. SIP3-4]
          Length = 246

 Score =  141 bits (355), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 55/243 (22%), Positives = 101/243 (41%), Gaps = 6/243 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       ++    + ++ +T A N++N  + GF+     F  V   I ++     +FV 
Sbjct: 1   MDRMIYTAMSGAKHILEQQATTAHNLANATSTGFKAQVDSFRAV--PIVSEGLPTRAFVI 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119
                     G+ I T  +LD A++G  W A++        TR+G  KV ++G L +A G
Sbjct: 59  DTTVATDFTPGTIIGTSRDLDIAIQGRGWIAVQRLDGSEAYTRNGSLKVNENGILQTADG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176
              + D   + I   ++  I   G    +S+      T  +     V+  +  + R   G
Sbjct: 119 LTVLGDGGPITIPPDERIAIGRDGTVSTVSRVTVPSPTNIVGRIKLVNPDESTLVRGTDG 178

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           +       P +  + + V  G LE SN N +  M  MI L ++F +   L++  E +  +
Sbjct: 179 LFSTQNGQPAQADANIQVASGALEGSNVNVVDAMVNMISLARQFETQMKLLENAENNANK 238

Query: 237 AIR 239
           A +
Sbjct: 239 ASQ 241


>gi|163742543|ref|ZP_02149929.1| flagellar basal-body rod protein FlgF [Phaeobacter gallaeciensis
           2.10]
 gi|161384128|gb|EDQ08511.1| flagellar basal-body rod protein FlgF [Phaeobacter gallaeciensis
           2.10]
          Length = 238

 Score =  141 bits (355), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 62/241 (25%), Positives = 117/241 (48%), Gaps = 6/241 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    L+ Q  L + +  VA+N++N+ T G+R   + FSE + +      + +S   
Sbjct: 1   MGDTGYTTLSRQSGLMREMRVVANNIANSATTGYRAEGIIFSEFIQSAPGQ--ESLSMGR 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           +     S   G+   +G +LD A+EGD +F +E+P G  LTR G F     G LV+  G 
Sbjct: 59  ANIRNTSMAQGALTQSGGDLDLAIEGDGYFMVETPMGERLTRSGAFSTNAQGDLVTMDGH 118

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
              LD    P+ IP   +    G  G +S  G+ +  +G++  + +   +R +      +
Sbjct: 119 RV-LDAGRAPVFIPGDAKSIKFGADGTLSADGRALGQIGIFKPEENYQMIREDGVMFRVD 177

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
                +ED     V +GFLE SN N++ ++ +M+ + + +    + ++  ++ +  AI+N
Sbjct: 178 GE---IEDAGDARVLQGFLEGSNVNAISQLARMVEIQRAYEMGQSFLETEDQRVRNAIKN 234

Query: 241 I 241
           +
Sbjct: 235 L 235


>gi|84388092|ref|ZP_00990988.1| polar flagellar FlgF [Vibrio splendidus 12B01]
 gi|84377159|gb|EAP94029.1| polar flagellar FlgF [Vibrio splendidus 12B01]
          Length = 249

 Score =  141 bits (355), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 60/241 (24%), Positives = 101/241 (41%), Gaps = 11/241 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  + ++      Q L   A+N++N  T GFR    +   +      +      F  
Sbjct: 1   MDRALFLAMSGAKQNMQALQLRANNLANVSTTGFRADLAQARSM--QAYGEGMPTRVFSM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           + +   +   GS ++TG +LD  ++GD W ++        LTR+G  KV  +G L +ASG
Sbjct: 59  TERPGHNFAQGSVVTTGRDLDVTIQGDGWISVMDNTGREGLTRNGNLKVDQNGLLTNASG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172
            + VL     PI +P       +G  G IS   +      L  VD        +Q   + 
Sbjct: 119 -HLVLGENDAPITLPIPISKVEIGTDGTISVIPQGAPAEELAIVDRIKLVRPDNQSLFKD 177

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            N       P    E  + VT+ +G +E SN N++ EM  +I L ++F     ++   E+
Sbjct: 178 TNGLFRSKNPDQAYEADAAVTLLKGAIEGSNVNAVGEMTSLIDLQRQFEMQVKMMSTAEE 237

Query: 233 S 233
            
Sbjct: 238 M 238


>gi|86146154|ref|ZP_01064480.1| polar flagellar FlgF [Vibrio sp. MED222]
 gi|218708805|ref|YP_002416426.1| flagellar basal body rod protein FlgF [Vibrio splendidus LGP32]
 gi|85836101|gb|EAQ54233.1| polar flagellar FlgF [Vibrio sp. MED222]
 gi|218321824|emb|CAV17794.1| Flagellar basal-body rod protein flgF [Vibrio splendidus LGP32]
          Length = 249

 Score =  141 bits (355), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 58/241 (24%), Positives = 101/241 (41%), Gaps = 11/241 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  + ++      Q L   ++N++N  T GFR    +   +      +      F  
Sbjct: 1   MDRALFLAMSGAKQNMQALQLRSNNLANVSTTGFRADLAQARSM--QAYGEGMPTRVFSM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           + +   +   GS ++TG +LD  ++GD W ++        LTR+G  +V  +G L +ASG
Sbjct: 59  TERPGHNFAQGSVVTTGRDLDVTIQGDGWISVMDNTGREGLTRNGNLRVDQNGLLTNASG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172
            + VL     PI +P       +G  G IS   +      L  VD        +Q   + 
Sbjct: 119 -HLVLGENDAPITLPIPISKVEIGTDGTISVIPQGAPAEELAVVDRIKLVRPDNQSLFKD 177

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            N       P    E  + VT+ +G +E SN N++ EM  +I L ++F     ++   E+
Sbjct: 178 TNGLFRSKNPDQAYEADAAVTLLKGAIEGSNVNAVGEMTSLIDLQRQFEMQVKMMSTAEE 237

Query: 233 S 233
            
Sbjct: 238 M 238


>gi|51246532|ref|YP_066416.1| flagellar basal-body rod protein (FlgF) [Desulfotalea psychrophila
           LSv54]
 gi|50877569|emb|CAG37409.1| related to flagellar basal-body rod protein (FlgF) [Desulfotalea
           psychrophila LSv54]
          Length = 248

 Score =  141 bits (354), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 51/248 (20%), Positives = 102/248 (41%), Gaps = 7/248 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M +     L+  L+ +Q +ST+++N++N +T GF+   + F  ++   + +  + I++  
Sbjct: 1   MVSGKYSALSGALSRQQAISTISNNLANVNTTGFKKNTLSFESILNNQQQNSAEGINYSR 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
            GK     + G+F  T   +D A++G A+F ++   G + TR G F +  D  L +  G 
Sbjct: 61  VGKSSTDFKQGTFKPTENPMDLAIQGKAFFKVQGVNGALYTRRGDFGLRGDNVLTTRHGL 120

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-----IATMGLYSVDMSQGFVRRENS 175
             + +          +      GE G I   GK      +  +GL+ +D     ++    
Sbjct: 121 PILSEAGGEITIPDAETSKIAFGEDGTIYILGKQGRREEVGKIGLFEIDDPS-LLKNAGD 179

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
                            ++ +G LE +N N +  M Q+I   + F ++   I        
Sbjct: 180 TSFSLEQGGQETISQESSLLQGNLEVANVNMVAAMAQLIDNQRAFETLNKAIKSYSTISD 239

Query: 236 EAIRNIAS 243
           +    + S
Sbjct: 240 QQ-DKLGS 246


>gi|59712480|ref|YP_205256.1| flagellar basal body rod protein FlgF [Vibrio fischeri ES114]
 gi|24459278|gb|AAL86631.1| FlgF [Vibrio fischeri ES114]
 gi|59480581|gb|AAW86368.1| flagellar proximal rod protein FlgF [Vibrio fischeri ES114]
          Length = 249

 Score =  141 bits (354), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 55/241 (22%), Positives = 99/241 (41%), Gaps = 11/241 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  + ++      Q +   ++N++N  T GFR    +   +      +      F  
Sbjct: 1   MDRALFLAMSGAKQNMQAMQLRSNNLANVSTTGFRADLEQARSM--QAYGEGLPTRVFNM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           + +   S   GS I+TG +LD  +EGD W ++        LTR G  K+ + G L++ SG
Sbjct: 59  TERPGSSFSQGSVITTGRDLDLTVEGDGWISVMDNTGREGLTRAGNLKIDETGLLMNGSG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172
            + VL     PI +P       + + G IS   +      +  VD        ++   + 
Sbjct: 119 -HVVLGENDAPITLPLPIAKIQIAKDGTISVLEQGAPAEAMAEVDRIKLVKTDNRDLFKD 177

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            N       P    +  + +T+  G LE SN N++ EM  +I L ++F     ++   E+
Sbjct: 178 TNGLFRSKNPGATFDADANITLLSGALEGSNVNAVGEMTNLIDLQRQFEMQVKMMSTAEE 237

Query: 233 S 233
            
Sbjct: 238 M 238


>gi|23092316|gb|AAN08641.1| FlgF [Aeromonas hydrophila]
          Length = 248

 Score =  141 bits (354), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 51/240 (21%), Positives = 101/240 (42%), Gaps = 10/240 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     I ++        L+   +N++N +T+GF++   +   +      +      F  
Sbjct: 1   MDHLLYIAMSGAKENMNSLAVRGNNLANANTIGFKSDFEQARSM--QAFGEGLPSRVFAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119
           + +   + + G  ++TG +LD A++G  W A++ P+G    TR G  +++  G+L +++G
Sbjct: 59  TERPGQNLQHGMLMTTGRDLDVAVDGQGWIAVQDPKGGEAYTRMGNLQLSATGNLQTSTG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD------MSQGFVRRE 173
              V D    PI +P   E   +   G IS + +  A               +   V + 
Sbjct: 119 LNVV-DDGGQPIVLPLPMEKIEINRDGTISGRPEGAAANLPEDFQRIQLVKPAADAVEKG 177

Query: 174 NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
             G+            + V +  G LE SN N + EM  +I L ++F +   ++   E++
Sbjct: 178 QDGLFRRKDGQTEAASANVGLIAGSLEGSNVNVVDEMTNLIRLQRQFETQVKIMKTAEEN 237


>gi|260774939|ref|ZP_05883840.1| flagellar basal-body rod protein FlgF [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260609194|gb|EEX35352.1| flagellar basal-body rod protein FlgF [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 249

 Score =  141 bits (354), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 58/241 (24%), Positives = 96/241 (39%), Gaps = 11/241 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  + ++      Q +   A+N++N  T GFR    +   +      D      F  
Sbjct: 1   MDRALFLAMSGAKQNMQAMQLRANNLANVSTTGFRADLAQARSM--QAYGDGMPSRVFSM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           + +   + + GS I+TG +LD  ++   W ++        LTR+G  KV  +G L + +G
Sbjct: 59  TERPGHNFQQGSVITTGRDLDVTIQDQGWISVLDNTGKEGLTRNGNMKVDVNGMLTTGNG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172
               L     PI IP       VG  G IS   +      +  VD        +Q   + 
Sbjct: 119 NLV-LGETGAPITIPIPISKIEVGTDGTISVVPQGAPADAIEIVDRIKLTSTNNQSLYKD 177

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            N       P    E  +GV +  G LE SN N++ EM  +I L ++F     ++   E+
Sbjct: 178 VNGLFRSKDPNAAYEMDAGVKLLTGALEGSNVNAIGEMTNLIDLQRQFEMQVKMMSTAEE 237

Query: 233 S 233
            
Sbjct: 238 M 238


>gi|325288806|ref|YP_004264987.1| fagellar hook-basal body protein [Syntrophobotulus glycolicus DSM
           8271]
 gi|324964207|gb|ADY54986.1| fagellar hook-basal body protein [Syntrophobotulus glycolicus DSM
           8271]
          Length = 257

 Score =  141 bits (354), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 51/258 (19%), Positives = 96/258 (37%), Gaps = 20/258 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTI---KVKFSEVVGAIKND------ 51
           M        A  LA  Q+  T+  N+ N  T G+R        F  ++            
Sbjct: 1   MIRGLYTAAAGMLANNQQSDTIDQNIENLKTPGYRQASEKLQAFPAMLVERMEPSSTEPV 60

Query: 52  ------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGR 105
                 I    + V           G    TG + D A+    +FA+ +P G   TR G 
Sbjct: 61  VMERTPIGSLGTGVQIESVMYQDGPGMLRETGNQTDVAITARGYFAVSTPDGERYTRSGH 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           F +   G L + SG   +         +    E F + E G +  K   +    L  VD+
Sbjct: 121 FLLDSAGGLRTPSGCPVL----GQNGPVGPIPENFEIREDGTMINKEDNMEVDRLRLVDI 176

Query: 166 S-QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224
             +   R  ++ +  +           V +K+G++E+SN N   ++ +M+ + + +++  
Sbjct: 177 PTEALQREGDTLLFSSSEGVVDIPAGEVRLKQGYVEESNVNLNAQIVKMLEVVRSYSANQ 236

Query: 225 TLIDENEKSMLEAIRNIA 242
            ++  N+  + +A+  I 
Sbjct: 237 KVVQTNDSLLQKAVNEIG 254


>gi|284041521|ref|YP_003391861.1| fagellar hook-basal body protein [Conexibacter woesei DSM 14684]
 gi|283945742|gb|ADB48486.1| fagellar hook-basal body protein [Conexibacter woesei DSM 14684]
          Length = 293

 Score =  141 bits (354), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 45/290 (15%), Positives = 90/290 (31%), Gaps = 51/290 (17%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M       ++     +  L   A++++N +TV +++ +  F + +  ++           
Sbjct: 1   MMRGMFSAISGLKVNQTMLDVTANDLANVNTVAYKSSRTTFQDSLAQLQRGAAGPGNGTG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII------LTR 102
                Q    V  G        G+  +TG+ LD  +EG  WF + +            TR
Sbjct: 61  GSNALQIGLGVKLGSVDNIMTEGAPQTTGSPLDVYIEGSGWFRVANGTPPAVPTAFQWTR 120

Query: 103 DGRFKVTDDGSLVSASGKYPVL-------DMASVPIQIPQKDEIFNVGEKG--------- 146
            G F     G L++++G+Y V        D        P   + +     G         
Sbjct: 121 AGNFTTNSQGHLITSTGQYVVGRGATATPDGRGGFTYAPNATDSYIQIPPGSTDVSISPD 180

Query: 147 ------------EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED-----L 189
                          ++      + L       G  R   S  S +              
Sbjct: 181 GGVSYVDRNRASPTFERRVTAGYIALGKFANEAGLQRNGGSTWSESAASGAATVDTPGVG 240

Query: 190 SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
                  G LE SN +   +   MI   + F + + +I  +++ + + + 
Sbjct: 241 GNGRTLAGMLEMSNVDLATQFTTMITAQRGFQANSRVISTSDEMLQDLVN 290


>gi|260767768|ref|ZP_05876703.1| flagellar basal-body rod protein FlgF [Vibrio furnissii CIP 102972]
 gi|260617277|gb|EEX42461.1| flagellar basal-body rod protein FlgF [Vibrio furnissii CIP 102972]
 gi|315179400|gb|ADT86314.1| flagellar basal body rod protein FlgF [Vibrio furnissii NCTC 11218]
          Length = 249

 Score =  141 bits (354), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 56/241 (23%), Positives = 101/241 (41%), Gaps = 11/241 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  + ++      Q +   A+N++N  T GFR    +   +      D      F  
Sbjct: 1   MDRALFLAMSGAKQNMQAMQLRANNLANVSTTGFRADLEQARSM--QAYGDGLPSRVFSM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119
           + +   + + GS I+TG +LD  ++GD W A ++      LTR+G   +  +G L++ +G
Sbjct: 59  TERPGHNFQQGSVITTGRDLDVTVQGDGWIAVMDKTGKEGLTRNGNLNIDANGLLLNGNG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172
            +PVL     PI +P       +G  G IS + +      +  VD        +Q   + 
Sbjct: 119 -HPVLGETGAPITLPVPLAKVEIGNDGTISVRPQGAPADAMEVVDRIKLVRLDNQSLFKD 177

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            N       P    +  + V +  G +E SN N++ EM  +I L ++F     ++   E 
Sbjct: 178 VNGLFRSKDPNAAYDANANVKILTGAVEGSNVNAVGEMTSLIDLQRQFEMQVKMMSTAED 237

Query: 233 S 233
            
Sbjct: 238 M 238


>gi|332305616|ref|YP_004433467.1| flagellar basal-body rod protein FlgF [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332172945|gb|AEE22199.1| flagellar basal-body rod protein FlgF [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 247

 Score =  141 bits (354), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 52/246 (21%), Positives = 92/246 (37%), Gaps = 8/246 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     I  +         +  A+N++NT T GFR    +   +      D      F  
Sbjct: 1   MDKLLYIAASGAKQDLLGTAVRANNLANTQTTGFRAQLEQARSM--PAFGDGLPTRVFSM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASG 119
           +     + E G+ I T   LD A++G+ W ++ ++      +R+G  +++ DG L  +SG
Sbjct: 59  TENPANNFEGGAMIQTERNLDVAIQGEGWLSVLDANGAEAYSRNGSLQISADGQLQDSSG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
              V +   V + IP  +          +  +G     +        V+     V R N 
Sbjct: 119 NSIVGEFGPVFLPIPLSNINIAGDGTISVRPQGAPETVLEEVGRLKLVNPDLDNVERGND 178

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
           G+         +    V+++ G LE SN N + EM  MI L + +      + E      
Sbjct: 179 GLFRQKDGELAQFDPTVSIRNGMLEGSNVNPVEEMVDMISLQRHYEMQVKFMKEASDLDS 238

Query: 236 EAIRNI 241
            A   +
Sbjct: 239 RA-NQL 243


>gi|297538897|ref|YP_003674666.1| flagellar basal-body rod protein FlgF [Methylotenera sp. 301]
 gi|297258244|gb|ADI30089.1| flagellar basal-body rod protein FlgF [Methylotenera sp. 301]
          Length = 246

 Score =  141 bits (354), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 55/245 (22%), Positives = 101/245 (41%), Gaps = 6/245 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       +     + ++ +T A N++N  + GF+     F  V   + ++     +FV 
Sbjct: 1   MDRMIYTAMTGAKHILEQQATTAHNLANVTSTGFKAQVDSFRAV--PVISEGLATRAFVV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
                     G+  ST  +LD A++G  W +++        TR+G  KV+++G L +A+G
Sbjct: 59  DSTVGADFNPGAIQSTNRDLDVAIQGKGWLSIQRADGSEGYTRNGSLKVSENGILQTATG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176
              + D   + I       +   G    ++   K  A+  L     V+  +  + R   G
Sbjct: 119 LTVLGDGGPISIPPDVAVSVGKDGTVSTVANGAKPGASNVLGRLKLVNPPEADLVRAEDG 178

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           +       P E  + V V  G LE SN N +  M  MI L ++F +   L+   E +  +
Sbjct: 179 LFVTSNGNPAEVDANVHVVGGALESSNVNVIDAMVSMISLARQFETQMKLMQSAENNANK 238

Query: 237 AIRNI 241
           A + +
Sbjct: 239 ASQLL 243


>gi|304321133|ref|YP_003854776.1| flagellar basal-body rod protein FlgG [Parvularcula bermudensis
           HTCC2503]
 gi|303300035|gb|ADM09634.1| flagellar basal-body rod protein FlgG [Parvularcula bermudensis
           HTCC2503]
          Length = 251

 Score =  140 bits (353), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 42/249 (16%), Positives = 93/249 (37%), Gaps = 21/249 (8%)

Query: 12  QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID--------------QKIS 57
             A + R+  +A+N++N  T  +      F++++     +                Q   
Sbjct: 1   MAAQQTRVDVIANNIANMSTTAYAARSAVFADLIYRQDVNPGAISSTQGTIVPTGVQLGL 60

Query: 58  FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVS 116
            V +    +    G+   T  +LD A+EG+ +F +  P G    +RDG+F+V  DG +V+
Sbjct: 61  GVQTQAVSMDMRQGALRQTTNDLDIAIEGNGFFEITLPNGEPAFSRDGKFEVDPDGLMVN 120

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGE-KGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
           + G      +                     + + +G+ I T+ L S    +G      +
Sbjct: 121 SDGFALADGITIPREARQVTISADGEVFAFFDDAVEGQSIGTITLTSFVNPKGLEAMGGN 180

Query: 176 GISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
                       +          +++G+LE+S  + + E+  +I   + +   + ++   
Sbjct: 181 LYRETTASGTPINGQPGQDGLGLLRQGYLEESGVDVVSEIADLIEAQRGYELNSKVLTAA 240

Query: 231 EKSMLEAIR 239
           ++    A R
Sbjct: 241 DEMYASATR 249


>gi|149183418|ref|ZP_01861851.1| flagellar basal-body rod protein [Bacillus sp. SG-1]
 gi|148848863|gb|EDL63080.1| flagellar basal-body rod protein [Bacillus sp. SG-1]
          Length = 280

 Score =  140 bits (353), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 47/280 (16%), Positives = 96/280 (34%), Gaps = 42/280 (15%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDIDQKIS 57
           M   F    +  L+ +++   +++N+SN +T G++  +     F E++ A++       +
Sbjct: 1   MLRGFYTVASGMLSQQRKTEMLSNNLSNANTPGYKADRSSMKAFPEMLLALQGQQQNIPT 60

Query: 58  -----------------FVASGKEYLSKEVGSFISTGTELDFALE--------------G 86
                             V   +   +   G    T    D AL               G
Sbjct: 61  QNGLSLPISRQVGGLNSGVYMQETIPAFMQGDLQETERLTDIALVDGNIPADPETGLPGG 120

Query: 87  DAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG 146
             +    +      TR+G F +   G L SASG Y +              +I   G   
Sbjct: 121 VFFTLEGADGAPRYTRNGNFTLDGQGYLTSASGLYVLDTEGQRIQLPSDNFKIAEDGRIL 180

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP----LEDLSGVTVKRGFLEDS 202
               +   + T       ++   + +E  G+       P        +   +++GF+E S
Sbjct: 181 VDEVETGRLGTG----FTVNANRLAKEGDGLFRTEDNEPLADAYNSGATFNMQQGFIERS 236

Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           N ++   M  M+   + F +   ++   ++SM +A+  I 
Sbjct: 237 NVDTARTMTDMMTAYRAFEANQKILQAYDRSMEKAVNEIG 276


>gi|182412222|ref|YP_001817288.1| hypothetical protein Oter_0398 [Opitutus terrae PB90-1]
 gi|177839436|gb|ACB73688.1| protein of unknown function DUF1078 [Opitutus terrae PB90-1]
          Length = 249

 Score =  140 bits (353), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 50/251 (19%), Positives = 103/251 (41%), Gaps = 11/251 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M        ++  ALE+   TVA N++++   G+R   + FS           ++     
Sbjct: 1   MNIGLYQSASSLSALERWQETVAQNITSSQVTGYRKRTINFSTQPAGELQSDPRRPVGSE 60

Query: 61  SGKEY--------LSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDD 111
           +G           ++   G    T  + D A++GD +F +  P G    TR+G F V  D
Sbjct: 61  AGVPTLFPKVNSGINFVSGETQPTRRDFDVAIQGDGFFQVRRPDGSFAYTRNGEFHVRAD 120

Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171
            +LV+ +G   +         +P  D++  +   G I Q    +A M +     +   + 
Sbjct: 121 RTLVTGTGDEVLNAGGGPITFLPNGDQVA-INTDGSIFQGETPVANMSVQRFADNAQLIP 179

Query: 172 RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
              +G          E ++   + +G+LE+SN   + EM  ++ +++ + +   +I   +
Sbjct: 180 MP-NGYFVPAAGMAPEAVTQPELLQGYLENSNVTPLREMVDLVIISRAYEANQRMITTLD 238

Query: 232 KSMLEAIRNIA 242
           + M +A+  + 
Sbjct: 239 QQMQKALDMLG 249


>gi|77918761|ref|YP_356576.1| flagellar basal body rod protein [Pelobacter carbinolicus DSM 2380]
 gi|77544844|gb|ABA88406.1| flagellar basal body rod protein [Pelobacter carbinolicus DSM 2380]
          Length = 245

 Score =  140 bits (353), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 51/247 (20%), Positives = 104/247 (42%), Gaps = 8/247 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK-NDIDQKISFV 59
           M     + L+  L  +Q + T++ N+SN +TVGF+  +  F  ++  ++  +I ++++  
Sbjct: 1   MNRGTYVALSGALVRQQLMDTISHNLSNNETVGFKKGQSVFKTMLERVQTGEILERVNLA 60

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSAS 118
              + +     G+   +G +   A++G+ +F +E     I  TR G  ++  +G L++  
Sbjct: 61  EIEEGFTDFSQGTLSPSGIQTHMAIQGEGFFKVEDEAGNIYYTRQGNLRLDYEGHLINNQ 120

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178
           G   + +       I      F V + G I+ +      + LY+ D      R+     S
Sbjct: 121 GMALLGEDRRP---ITLTSPDFTVDDDGTITLEDGQKIKIPLYTFDDYSVLTRQGGGQFS 177

Query: 179 PNIPPTPLED--LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                    +  +    + +G LE SN N M EM  M+  T+ F +   ++        E
Sbjct: 178 VPKGQERDLEILVKDSHIYQGQLERSNVNLMQEMSHMVESTRVFEACQKMLKTYHSIAAE 237

Query: 237 AIRNIAS 243
           A   + +
Sbjct: 238 A-NKLGT 243


>gi|172061971|ref|YP_001809623.1| flagellar basal body rod protein FlgF [Burkholderia ambifaria
           MC40-6]
 gi|171994488|gb|ACB65407.1| flagellar basal-body rod protein FlgF [Burkholderia ambifaria
           MC40-6]
          Length = 252

 Score =  140 bits (353), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 50/249 (20%), Positives = 89/249 (35%), Gaps = 9/249 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS--- 57
           M       +        + + VA+N++N  T GFR     +  V     +      +   
Sbjct: 1   MDRLIYTAMTGASQSLDQQAIVANNLANASTTGFRAQLATYRAVPMNFGDGSTSDPTTTR 60

Query: 58  -FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLV 115
            +V +         G    TG  LD A++G  W A+++       TR G   V ++G LV
Sbjct: 61  TYVLASTPGADYAAGPITRTGNPLDVAVQGAGWLAVQTADGSEAYTRAGNLHVDENGQLV 120

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT---MGLYSVDMSQGFVRR 172
           +AS    + +   + +    +  I   G    +       A      +  V+     + R
Sbjct: 121 NASNLPVIGNGGPISVPPNAEVTIGKDGTVSALMPGDPPTAVAIVDQMKLVNPDPATLSR 180

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            N G+       P +    V V    LE SN N +  M  MI   + F   + LI   ++
Sbjct: 181 GNDGLFRTADGNPADSDPSVVVTPNSLEGSNVNPVTAMVAMIDNARAFQLQSKLIQTADQ 240

Query: 233 SMLEAIRNI 241
           +  ++   +
Sbjct: 241 N-EQSANQL 248


>gi|283780136|ref|YP_003370891.1| flagellar basal body rod protein [Pirellula staleyi DSM 6068]
 gi|283438589|gb|ADB17031.1| flagellar basal body rod protein [Pirellula staleyi DSM 6068]
          Length = 250

 Score =  140 bits (353), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 46/251 (18%), Positives = 86/251 (34%), Gaps = 14/251 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE---------VVGAIKND 51
           M     I  A   A  Q++  + +N++N DT GF+     F                   
Sbjct: 1   MYYGLYISAAGAYAQNQKVEMITNNLANVDTSGFKKELGIFEARQSEAIERGYEQPGTRG 60

Query: 52  IDQKISFVASGKEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTRDGRFKVTD 110
           +      V   +      +G+  +T +  DFAL   D +F +E     +LTR G F  + 
Sbjct: 61  VSDIGGGVEFKETVTDFSLGTLRATSSRTDFALPATDQFFEIERDGEALLTRSGNFHFSV 120

Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170
           DG L +  G   +    +    +     +      G +  +G     + +  V   +   
Sbjct: 121 DGVLRTQDGDAVLAAGGTP---LTLDPSLPWRVLPGGLISQGGDTVPLSIKQVSNFRSLE 177

Query: 171 RRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
           +   +                  V+ G LE S  N M EM +MI  ++ + +   +I  +
Sbjct: 178 KVGLNA-FRANGELTDVPAELRDVRSGSLELSTVNPMQEMVEMIASSRAYENNIKMIQHH 236

Query: 231 EKSMLEAIRNI 241
           +      +  +
Sbjct: 237 DGMTGSLVSRL 247


>gi|254474364|ref|ZP_05087750.1| flagellar basal-body rod protein FlgF [Ruegeria sp. R11]
 gi|214028607|gb|EEB69442.1| flagellar basal-body rod protein FlgF [Ruegeria sp. R11]
          Length = 239

 Score =  140 bits (353), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 62/236 (26%), Positives = 113/236 (47%), Gaps = 6/236 (2%)

Query: 6   NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65
              L+ Q  L + +  VA+N++N  T G+R+  + FSE + +      + +S   +    
Sbjct: 6   YTTLSRQSGLMREMRVVANNIANAATTGYRSEGLIFSEFIQSAPGQ--ESLSMARANIRN 63

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125
            S   G    TG +LD ALEGD +F +E+P G  LTR G F     G LV+  G    LD
Sbjct: 64  TSLAQGQLTQTGGDLDLALEGDGYFMVETPMGERLTRSGTFSTNAAGDLVTMDGYRV-LD 122

Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185
               P+ +P   +    G  G +S  G+ +  +G++  + +   VR +      +     
Sbjct: 123 AGRAPMFVPGDAKSVKFGADGTLSVDGRALGQIGIFKPEQTHQMVREDGVMFRVDGE--- 179

Query: 186 LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           +E      V +GFLE SN N++ E+ +M+ + + +    + ++  ++ + +AI+ +
Sbjct: 180 VEAAFETRVLQGFLEGSNVNAISEVARMVEIQRAYEMGQSFLETEDQRVRDAIKKL 235


>gi|78067836|ref|YP_370605.1| flagellar basal body rod protein FlgF [Burkholderia sp. 383]
 gi|77968581|gb|ABB09961.1| conserved hypothetical protein [Burkholderia sp. 383]
          Length = 252

 Score =  140 bits (353), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 50/249 (20%), Positives = 89/249 (35%), Gaps = 9/249 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS--- 57
           M       +        + + VA+N++N  T GFR     +  V     +      +   
Sbjct: 1   MDRLIYTAMTGASQSLDQQAIVANNLANASTTGFRAQLATYRAVPMNFGDGSTSDPTTTR 60

Query: 58  -FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLV 115
            +V +         G    TG  LD A++G  W ++++       TR G   V ++G LV
Sbjct: 61  TYVLASTPGADYAPGPITRTGNPLDVAVQGAGWLSVQAADGSEAYTRAGNLHVDENGQLV 120

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT---MGLYSVDMSQGFVRR 172
           +AS    V +   + +    +  I   G    +       A      +  V+     + R
Sbjct: 121 NASNLPVVGNGGPISVPPNAEVTIGKDGTISALMPGDPPTAVAIVDQMKLVNPDPATLTR 180

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            N G+       P +    V V    LE SN N +  M  MI   + F   + LI   ++
Sbjct: 181 GNDGLFRTADGNPADADPNVVVTPNSLEGSNVNPVTAMVAMIDNARAFQLQSKLIQTADQ 240

Query: 233 SMLEAIRNI 241
           +  ++   +
Sbjct: 241 N-EQSANQL 248


>gi|149188067|ref|ZP_01866362.1| flagellar basal body rod protein FlgF [Vibrio shilonii AK1]
 gi|148838055|gb|EDL54997.1| flagellar basal body rod protein FlgF [Vibrio shilonii AK1]
          Length = 249

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 54/241 (22%), Positives = 96/241 (39%), Gaps = 11/241 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  + ++      Q L   A+N++N  T GFR    +   +      +      F  
Sbjct: 1   MDRALYLSMSGAKQNMQALQLRANNLANASTPGFRADLAQARSM--QAYGEGMPSRVFSM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASG 119
           + +   + E GS ++TG +LD  +EG  W ++ +      LTR+G  +V  +G LV+ +G
Sbjct: 59  TERPGHNFEQGSVVTTGRDLDVTIEGQGWISVLDKNGKEGLTRNGSLRVDQNGLLVNGNG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172
               L     PI +P       +G  G +S   +      +  VD        ++   + 
Sbjct: 119 NLV-LGERGTPITVPIPLRKIEIGRDGTVSVIPQDAPADEMEIVDRIKLTNTDNRSLFKD 177

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            N       P       + V +  G +E SN N++ EM  +I L ++F     L+   E 
Sbjct: 178 TNGLFRNKDPQLGYTASANVQLMTGAIEGSNVNAVGEMTSLIDLQRQFEMQVKLMSTAED 237

Query: 233 S 233
            
Sbjct: 238 M 238


>gi|119775449|ref|YP_928189.1| flagellar basal body rod protein FlgF [Shewanella amazonensis SB2B]
 gi|119767949|gb|ABM00520.1| flagellar basal-body rod protein FlgF [Shewanella amazonensis SB2B]
          Length = 247

 Score =  140 bits (352), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 91/238 (38%), Gaps = 7/238 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     I ++        LS  A+N++N +T GF+    +   +      +      F  
Sbjct: 1   MDKFLYIAMSGAKQNLNSLSIRANNLANANTDGFKADLEQSRSM--QAFGEGLPTRVFAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +     S   G   ST  +LD A++GD W A+E        TR G  K  + G L ++ G
Sbjct: 59  TENPQASFRHGPINSTARDLDVAVKGDGWIAVEDADGNEAYTRAGSLKFDETGLLTNSQG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS----VDMSQGFVRRENS 175
           +  + D   + + +P             +  +G     +   +    V+     + R + 
Sbjct: 119 RPVMGDAGPIVLPLPIDKVEIAQDGTITVRPQGATAEVVEEVARIKLVNPGNQNLMRGDD 178

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           G+   +  T       V ++   +E SN N + EM  +I + ++F     ++   E++
Sbjct: 179 GLFRMMNGTTAPQDETVALESRAVEGSNVNPVEEMVALIDIQRQFELQVKMMKTAEEN 236


>gi|325295398|ref|YP_004281912.1| fagellar hook-basal body protein [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325065846|gb|ADY73853.1| fagellar hook-basal body protein [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 238

 Score =  140 bits (352), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 62/242 (25%), Positives = 115/242 (47%), Gaps = 11/242 (4%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRT-IKVKFSEVVGAIKNDIDQKISFVA 60
             +  +  A      ++L T A+N++N +T GF+  I+ + S+ +   K D +  + F  
Sbjct: 5   LQALYVLAAGGERAVEQLDTAANNIANINTPGFKKLIEEEMSQHIPDNKGDANNLLIFPR 64

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
               ++  E G+   T   LD AL+G+ +FA+++  G + TR+G F +  +G LV + G 
Sbjct: 65  FKATHIVLEQGTLQKTDNPLDLALKGNGFFAVKTKTGELYTRNGHFFLNAEGKLVDSKGN 124

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
             +    S    +  K+E  ++ E G + Q  K +A + + +    Q      +S  + N
Sbjct: 125 PVL--DISDKEILLIKNEPIHITEDGVVYQGNKKVAVLKIVNF---QSVKPIGDSYYAGN 179

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
             P P E      V +GFLE SN + + EM ++I+  ++F     LI   ++  L++   
Sbjct: 180 GTPLPTE----AKVLQGFLESSNVDPVKEMVELINAQRRFEIYGNLIRGLDQLNLKS-NE 234

Query: 241 IA 242
           I 
Sbjct: 235 IG 236


>gi|327480021|gb|AEA83331.1| flagellar basal body rod protein FlgF [Pseudomonas stutzeri DSM
           4166]
          Length = 246

 Score =  140 bits (351), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 50/245 (20%), Positives = 94/245 (38%), Gaps = 6/245 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + +       +     A+N++N  T GFR    +   +   +  D      +  
Sbjct: 1   MDKMLYVAMTGASQNARAQQAHANNLANISTTGFRRDFEQARSM--QVFGDSHPARVYAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           S +       G+   TG +LD A+EG  W A+++P       R G   +   G L +A G
Sbjct: 59  SERPGTDFTPGTLQETGRDLDVAVEGQGWIAVQAPDGSEAYVRTGSLNIDVLGMLRTADG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEIS---QKGKVIATMGLYSVDMSQGFVRRENSG 176
              + +   + I   +K ++ + G     +       V+    +  V+     + +   G
Sbjct: 119 MPVMGNGGPIAIPPEEKVDVGHDGTISIRALGEDPNIVVTVDRIKLVNPDPQQLEKGADG 178

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           +       P+E    V V  GFLE SN N++ EM  ++ L+++F     ++   E     
Sbjct: 179 LIRLKSGQPVEADGNVRVVSGFLETSNVNAVSEMTSILALSRQFELHVKMMRTAEDDAAA 238

Query: 237 AIRNI 241
             R +
Sbjct: 239 MARVL 243


>gi|313903628|ref|ZP_07837018.1| fagellar hook-basal body protein [Thermaerobacter subterraneus DSM
           13965]
 gi|313466181|gb|EFR61705.1| fagellar hook-basal body protein [Thermaerobacter subterraneus DSM
           13965]
          Length = 275

 Score =  140 bits (351), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 48/274 (17%), Positives = 89/274 (32%), Gaps = 33/274 (12%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
           Q +     A   A  +++   A N++N  T GF+  +  F+++V A              
Sbjct: 3   QRALWSSAAGMAAAARQVDLTAGNLANVSTPGFKAARADFADLVYAAAQVPVAPPAAAAG 62

Query: 54  --QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR--GIILTRDGRF--- 106
             Q    V           G   +TG+  D A+EG  +  +  P    ++LTR G F   
Sbjct: 63  GVQVGHGVRLAATPRLWSQGPLQATGSPWDLAIEGAGFLQVADPGTGEVLLTRGGTFAAS 122

Query: 107 -----------------KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEIS 149
                                 G  + A+G  P+L  A     +   D        G   
Sbjct: 123 PVPAGVPGGGEAGEALLVTDGAGRPLLAAGGQPLLLPAGSRGWVVSPDGEVRALLAGGRE 182

Query: 150 QKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYE 209
                +A M   + D  +       +     +P           +++G LE SN +   E
Sbjct: 183 VPAGRLAVMVPPAPDALESRGEGLYALGGNPVPAGAPGQDGAGWIRQGMLEQSNVDLALE 242

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           M +++   + +      +   ++ +   I  + S
Sbjct: 243 MTRLLASQRAYQLNARAVLTGDEML-SLINRLRS 275


>gi|83944163|ref|ZP_00956619.1| Flagellar basal body rod protein [Sulfitobacter sp. EE-36]
 gi|83845030|gb|EAP82911.1| Flagellar basal body rod protein [Sulfitobacter sp. EE-36]
          Length = 259

 Score =  140 bits (351), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 53/244 (21%), Positives = 102/244 (41%), Gaps = 5/244 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + L+   AL + + T A N++N  T G++ I      V        D  I++V 
Sbjct: 17  MSNISYVALSQATALTRSMDTTAHNLANATTSGYKAIHPVLESVP---DGSGDNAINYVR 73

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLVSASG 119
               YL    G  + TG  +D A+ GD W + + P G    +R GR  V  DG L +A G
Sbjct: 74  ESGTYLELADGPLMQTGNPMDIAVAGDGWLSFQLPGGETGYSRHGRLVVDVDGQLKTAGG 133

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEIS-QKGKVIATMGLYSVDMSQGFVRRENSGIS 178
              +       +      +   +   G ++  +G V+  + + +++ +   +        
Sbjct: 134 MPLLGVGGGPVVLPDDVGDEVVITTSGTVTNPQGAVLGAVSVVAINEAAQMLPMGAGMYQ 193

Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
                   + +    VK+GF+E SN N++ EM ++I + + + +   L+  ++     AI
Sbjct: 194 LPPNAGQPQQMENPQVKQGFIEGSNVNAVLEMTRLIDIQRAYENSVKLMGSDDDLTRTAI 253

Query: 239 RNIA 242
           + + 
Sbjct: 254 QKLG 257


>gi|90021854|ref|YP_527681.1| flagellar basal body rod protein FlgF [Saccharophagus degradans
           2-40]
 gi|89951454|gb|ABD81469.1| Flagellar basal-body rod FlgF [Saccharophagus degradans 2-40]
          Length = 249

 Score =  140 bits (351), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 43/238 (18%), Positives = 94/238 (39%), Gaps = 6/238 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  I +          +  A+N++N +T GF+    +   +          +  +  
Sbjct: 1   MDKALYIAMTGAKHNMLAQTAHANNLANVNTTGFKADFAQARSMPIYYGEGEPTRA-YAL 59

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +     +   G+ + TG ELD A+E + + A+++P      TR G   +   G L + +G
Sbjct: 60  TENPGTNFSQGALVETGRELDIAVEREGFIAVQAPDGTEAFTRAGSLHIDSVGILRTGNG 119

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV----DMSQGFVRRENS 175
              + +   + +   +K E+   G    I       AT+    V           + E+ 
Sbjct: 120 LPVLGNGGPIALPPAEKIEMAADGTITLIPLGEGKEATVQADRVKLVNPDVNTLTKSEDG 179

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
            +        ++    V +  GFLE SN N++ E+  M+ L++++     ++   +++
Sbjct: 180 LLRALENDGEVQADGTVRIVSGFLEASNVNAVNELVSMLELSRQYEMQVKVMQTIKQN 237


>gi|116626491|ref|YP_828647.1| flagellar basal body rod protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116229653|gb|ABJ88362.1| flagellar basal body rod protein [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 241

 Score =  140 bits (351), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 46/242 (19%), Positives = 94/242 (38%), Gaps = 3/242 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     I  +   A  + L  +A+N++N  T G++  +  +S              +   
Sbjct: 1   MDPLTAIAASGLRARMESLDLLANNVANASTGGYKADREFYSLYTAPEAAGDGSLSTMPV 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
             + ++    G   +TG  LD A+ G  +F +  P G + TR+G F++  DG L +A G 
Sbjct: 61  IERPWVDHSQGILHTTGNALDVAISGKGFFTVNGPSGPLYTRNGSFRLAADGKLTTADGY 120

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
                  +      Q      +   G ++Q G ++  + +     + G   ++ S     
Sbjct: 121 PVRDPQGTALT--LQTTRPVEIARDGTVTQDGAIVGKLEIVDFTSTAGL-SKQGSNYFRA 177

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
            P       +  ++++G LE SN  S     +++ + ++F  +   +         AI  
Sbjct: 178 DPSLKSAPAADASLQQGSLEASNTGSAEAAVRLVSVLRQFEMMQKAVSIGNDMSKRAIEE 237

Query: 241 IA 242
           +A
Sbjct: 238 VA 239


>gi|238028848|ref|YP_002913079.1| flagellar basal body rod protein FlgF [Burkholderia glumae BGR1]
 gi|37360907|dbj|BAC98361.1| flagellar basal-body rod protein [Burkholderia glumae]
 gi|237878042|gb|ACR30375.1| Flagellar basal-body rod protein [Burkholderia glumae BGR1]
          Length = 250

 Score =  140 bits (351), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 56/247 (22%), Positives = 93/247 (37%), Gaps = 7/247 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK--NDIDQKISF 58
           M       +        + S +A+N++NT T GFR     +  V       ++ D   +F
Sbjct: 1   MDRLIYTAMTGADQALDQQSVIANNLANTSTTGFRAQLATYRAVPMNFGEASNPDTTRTF 60

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSA 117
           V S         G    TG  LD A++G  W  + +P      TR G   V ++G LV+A
Sbjct: 61  VLSSTPGADYSAGPIARTGNPLDVAVQGKGWLTVLAPDGSEGYTRAGNLHVDENGQLVNA 120

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEIS---QKGKVIATMGLYSVDMSQGFVRREN 174
           S    V     + +    +  I + G    ++       +     L  V+     ++R +
Sbjct: 121 SNLPVVGTGGPISVPPNGQVTIGSDGTVSVLAAGDPPSAIAMVDQLKLVNPEPASMKRGD 180

Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
            G+       P E    V +    LE SN N +  M  M+   + F   T LI+  +++ 
Sbjct: 181 DGLFRTTDGNPAEVDPSVVLAPSSLEGSNVNPVSAMVSMLDNARAFQLHTKLIETADQNE 240

Query: 235 LEAIRNI 241
             A   I
Sbjct: 241 QNA-NQI 246


>gi|167585195|ref|ZP_02377583.1| flagellar basal-body rod protein FlgF [Burkholderia ubonensis Bu]
          Length = 252

 Score =  140 bits (351), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 53/249 (21%), Positives = 90/249 (36%), Gaps = 9/249 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----DIDQKI 56
           M       +        + + VA+N++N  T GFR     +  V     +    D     
Sbjct: 1   MDRLIYTAMTGASQALDQQAIVANNLANASTTGFRAQLATYRAVPMNFGDGSTIDPTTTR 60

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLV 115
           ++V S         G    TG  LD A++G  W +++ +      TRDG   V  DG LV
Sbjct: 61  TYVLSSTPGSDFAPGPISRTGNPLDVAVQGAGWLSVQLADGSEAYTRDGNLHVNQDGQLV 120

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT---MGLYSVDMSQGFVRR 172
           +AS    V +   + +    +  I   G    +       A      +  V+     + R
Sbjct: 121 NASNLPVVGNGGPISVPPNAEVTIGKDGTVSALMPGDPPTAVAMIDQMKLVNPDPATITR 180

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            N G+       P +    V V    LE SN N +  M  MI   + F   + +I   ++
Sbjct: 181 GNDGLFRTTDGNPADADPNVVVVPNSLEGSNVNPVNAMVAMIDNARAFQLQSKMIQTADQ 240

Query: 233 SMLEAIRNI 241
           +  ++   +
Sbjct: 241 N-EQSANQL 248


>gi|264676571|ref|YP_003276477.1| flagellar basal-body rod protein FlgF [Comamonas testosteroni
           CNB-2]
 gi|262207083|gb|ACY31181.1| flagellar basal-body rod protein FlgF [Comamonas testosteroni
           CNB-2]
          Length = 246

 Score =  140 bits (351), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 51/244 (20%), Positives = 89/244 (36%), Gaps = 5/244 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       +    A  QR + +A N++N  T GFR     F  V   ++        F  
Sbjct: 1   MDKIIYTSMTGANAAAQRQAVLAHNLANAGTNGFRAEMSTFRSV--PLQGSGAGTRVFAL 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119
                     G    TG  LD    G AWFA++        TR+G F+++ +G LV+++G
Sbjct: 59  EATSGYQDTPGPAQRTGRALDAMAMGRAWFAVQGLDGQEAYTRNGVFEISPEGQLVNSNG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS--QGFVRRENSGI 177
           +  + D  +     P+                 ++   +G   +        + R + G 
Sbjct: 119 QAVLSDGGAPIDIPPESTISLGSDGTLTAKMGNQLPVAVGRVKLVTPPVDEPLVRGDDGF 178

Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                   L +     +  G +E SN NS+  M  MI  +++F     L+   E +   A
Sbjct: 179 FRAAQGDALPNDETARLLSGSIEGSNVNSVETMVGMIAASRQFEQQMKLLQTAETNDKSA 238

Query: 238 IRNI 241
            + +
Sbjct: 239 SQLL 242


>gi|304321132|ref|YP_003854775.1| flagellar basal-body rod protein FlgF [Parvularcula bermudensis
           HTCC2503]
 gi|303300034|gb|ADM09633.1| flagellar basal-body rod protein FlgF [Parvularcula bermudensis
           HTCC2503]
          Length = 238

 Score =  140 bits (351), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 55/230 (23%), Positives = 101/230 (43%), Gaps = 7/230 (3%)

Query: 9   LAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSK 68
           ++ Q  L + +  +A+N++N  T GF++    FSE V      +   +S      +    
Sbjct: 9   VSRQGGLLKAVQMIANNIANASTPGFKSEGAIFSEYVSE-GRSLATSLSMGRFVGQSTDY 67

Query: 69  EVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMAS 128
             G    TG   DFA++G+ +F + +P G  LTR G +    +G +V  +G  P+LD   
Sbjct: 68  ASGPLKQTGGTYDFAIQGEGFFKVSTPAGERLTRAGSYTTDLEGVIVDPAGN-PLLDEGG 126

Query: 129 VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED 188
             I IP       VG+ G +S  G++ A +G+Y+     G   R    +        +  
Sbjct: 127 GEITIPPDAVSVGVGQDGTLSVDGEIFAKIGVYT---PLGEPERVGDNLWRVPDGDAV-- 181

Query: 189 LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
                V +GF+E SN   + E  +++   + + +   + D+  + +   I
Sbjct: 182 FEEGRVLQGFIEGSNVQPVAEFAKLMLAQRMYEAGQKMADQEHERLSTLI 231


>gi|157692308|ref|YP_001486770.1| flagellar basal body rod protein FlgG [Bacillus pumilus SAFR-032]
 gi|157681066|gb|ABV62210.1| flagellar basal body rod protein [Bacillus pumilus SAFR-032]
          Length = 263

 Score =  140 bits (351), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 52/260 (20%), Positives = 98/260 (37%), Gaps = 21/260 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++     + +L  VA+N++N +T G++  ++ F ++V               
Sbjct: 1   MLRSLYSGISGMKNFQSKLDVVANNVANVNTHGYKKSRITFKDMVSQTIGSSGGPTNNSG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                Q     +          GS  +T    DF + GD +F +ES   ++ TR G F  
Sbjct: 61  SINSKQIGLGSSLSSIDKIMSAGSSQNTNEPYDFYINGDGFFRIESQGEVLYTRTGNFDT 120

Query: 109 TDDGSLVSASGKYPVLDMAS---VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
             +GSLV+  G Y +        +P  +       +       +   + +  + L S   
Sbjct: 121 DSEGSLVTPDGNYLLGMNGQKITIPDGVSSVSVGPDGTISVVENNVSRTVGQISLVSFRN 180

Query: 166 SQGFVRRENSGISPN----IPPTPLEDLSGVT--VKRGFLEDSNANSMYEMGQMIHLTQK 219
           + G  +  ++          P  P+      T  ++ G LE SN +   E  +MI   + 
Sbjct: 181 AGGLDKVGDNLYRQTLSSGAPSNPIVPGEQGTGVIQTGKLEMSNVDLTDEFTEMIIAQRG 240

Query: 220 FNSITTLIDENEKSMLEAIR 239
           F S    I  +++ + E + 
Sbjct: 241 FQSNAKTITTSDEILQELVN 260


>gi|121997318|ref|YP_001002105.1| flagellar basal-body rod protein FlgF [Halorhodospira halophila
           SL1]
 gi|121588723|gb|ABM61303.1| flagellar basal-body rod protein FlgF [Halorhodospira halophila
           SL1]
          Length = 246

 Score =  139 bits (350), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 47/244 (19%), Positives = 87/244 (35%), Gaps = 5/244 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + +       +       N++N  T GFR     F      +        ++  
Sbjct: 1   MDRQLYVAMTGAKHSLEAQHHNNQNLANASTPGFRADLDSF--YQAPVYGPGFATRAYAE 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
             +       G   +TG +LD A++ + WF +++P      TR G F+ T +G L +  G
Sbjct: 59  ELRAGTDFNPGPIETTGRDLDVAIQDEGWFVVQAPDGDEAYTRRGDFQTTPEGLLTTGDG 118

Query: 120 KYPVL--DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177
              +      S+P           V         G  I    L  V+     + +   G+
Sbjct: 119 HMVMGEAGPISIPPDTKVDIADDGVITATPQGGAGAPIELDRLRLVNPDPTQLVKGEDGL 178

Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
             +    P  D + V V+ G LE SN N    +  MI   ++F +   ++   E++   +
Sbjct: 179 IRHAEGEPAADDAQVRVRGGALEGSNVNMAESLVNMIDHARQFETHIKMLTAAEENEQTS 238

Query: 238 IRNI 241
            + +
Sbjct: 239 AQLL 242


>gi|114562343|ref|YP_749856.1| flagellar basal body rod protein FlgF [Shewanella frigidimarina
           NCIMB 400]
 gi|114333636|gb|ABI71018.1| flagellar basal-body rod protein FlgF [Shewanella frigidimarina
           NCIMB 400]
          Length = 247

 Score =  139 bits (350), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 49/238 (20%), Positives = 97/238 (40%), Gaps = 7/238 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     I ++        L+  A+N++N +T GF+   V+   +      +      F  
Sbjct: 1   MDKFLYIAMSGAKQGMNALAVSANNLANANTDGFKADMVQARSM--QAFGEGLPTRVFSM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
                 +   G   +TG +LD A++GD W A+++       TR G  K+   G L+++S 
Sbjct: 59  MESPGSNFNGGPIKTTGRDLDIAVKGDGWLAVQAADGSEGYTRAGSLKIDSTGMLLNSSN 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS----VDMSQGFVRRENS 175
           +  +     + + IP +    +      +  +G     +   +    V+     + R   
Sbjct: 119 RPVMGASGPIVLPIPVEKIEISANGIISVRPQGATAEVIEEVARIKLVNPGNENLMRGED 178

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           G+   I      +  GV V+ G +E SN NS++EM  MI + +++     ++   E+ 
Sbjct: 179 GLFRLIAGGNAPNDPGVQVESGAVEGSNVNSVHEMVAMIDIQRQYEMQVKMMKNAEEI 236


>gi|149173758|ref|ZP_01852387.1| Flagellar biosynthesisprotein [Planctomyces maris DSM 8797]
 gi|148847288|gb|EDL61622.1| Flagellar biosynthesisprotein [Planctomyces maris DSM 8797]
          Length = 274

 Score =  139 bits (350), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 52/254 (20%), Positives = 103/254 (40%), Gaps = 13/254 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKF---------SEVVGAIKND 51
           M     +      A   RL  +++NM+N +T  F+     F            +  +  D
Sbjct: 18  MIYGMYLSAQGAEANSVRLDVLSNNMANANTTSFKRDVPIFRVNPPHDQHEGALNPLPGD 77

Query: 52  IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDD 111
           ++     ++        E GS I+T +E D AL+G  +F + + +   LTR+G   +  D
Sbjct: 78  LENHSGGISLESITTDFEPGSLITTNSEFDLALKGQGFFQVGNAQESFLTRNGSLSIDGD 137

Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ---KGKVIATMGLYSVDMSQG 168
             LV+A    P+L      I++P +     +   G ++      + +  +G  +V M   
Sbjct: 138 RRLVTADHGMPILTTDGREIKVPIEASHVAITPDGVVTPLDADDQPMGKLGQLAVVMPGA 197

Query: 169 FVRRENSGIS-PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
                  G +                + +GFLE S  NS+ EM +++  ++ F S   +I
Sbjct: 198 LDELVKIGKNLYTTEGRVNPLEGPANIAQGFLEASGTNSVEEMMELVTSSRMFESNINMI 257

Query: 228 DENEKSMLEAIRNI 241
              ++S+   ++++
Sbjct: 258 KLQDESLGRLLQSM 271


>gi|311694362|gb|ADP97235.1| flagellar basal-body rod FlgF [marine bacterium HP15]
          Length = 250

 Score =  139 bits (350), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 48/252 (19%), Positives = 100/252 (39%), Gaps = 13/252 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  IG++            A+N++N  T GF+    +   +   +  +     ++  
Sbjct: 1   MDKALYIGMSGAKQNMLAQQAHANNLANVSTTGFKKDFAQARSM--PVYGEHHPTRAYAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           + +       G+ + TG +LD A+EG+ W A+++ +   + TR G  +V  +G +  A+G
Sbjct: 59  TERPGTDLSAGALMETGRKLDVAVEGEGWLAIQNDQGEEVFTRSGSLQVDVNGLVRLANG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV---IATMGLYSVDMSQGFVRRENSG 176
           +  + +   V +      EI   G    +   G     +    L  V      + +   G
Sbjct: 119 ELVLGNGGPVALPPFDNVEIGADGTVSIVPVGGPPDQLVEVDRLKLVSPPPEALEKGLDG 178

Query: 177 ISPNIPPT----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
                P      P    +   V  GFLE SN N++ EM   + L++++     ++    +
Sbjct: 179 HMRRKPDQALDGPEPPDANQRVASGFLESSNVNAVEEMISNLQLSRQYEMQVKVMTTANE 238

Query: 233 S---MLEAIRNI 241
           +       ++N+
Sbjct: 239 NSEATARLLQNL 250


>gi|120554034|ref|YP_958385.1| flagellar basal body rod protein FlgF [Marinobacter aquaeolei VT8]
 gi|120323883|gb|ABM18198.1| flagellar basal-body rod protein FlgF [Marinobacter aquaeolei VT8]
          Length = 250

 Score =  139 bits (350), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 102/252 (40%), Gaps = 13/252 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  IG++            A+N++N +T GF+    +   +   +  +     ++  
Sbjct: 1   MDKALYIGMSGAKQNMLAQRAHANNLANVNTTGFKKDFAQARSM--PVFGEHHPTRAYAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESP-RGIILTRDGRFKVTDDGSLVSASG 119
           + +       G+ + TG +LD A++G  W A+++     + TR G  +V  +G +  ASG
Sbjct: 59  TERPGTDLSPGALMETGRKLDVAVDGGGWLAVQNNLGEEVFTRTGSLQVDVNGLVRLASG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV---IATMGLYSVDMSQGFVRRENSG 176
           +  + +   V +      ++ + G    +   G     +    L  V+     + +   G
Sbjct: 119 ELVLGNGGPVALPPFDNLQVGSDGTISIVPVGGPPDQLVEVDRLKLVNPPADALEKGLDG 178

Query: 177 ISPNIPPT----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
                P      P    + + V  GFLE SN N++ EM   + L++++     ++    +
Sbjct: 179 FIRRKPDQALDGPEPPDAAMRVATGFLESSNVNAVEEMISNLQLSRQYEMQVKVMTTANE 238

Query: 233 S---MLEAIRNI 241
           +       ++N+
Sbjct: 239 NSEATARLLQNL 250


>gi|307546967|ref|YP_003899446.1| flagellar basal body rod protein FlgF [Halomonas elongata DSM 2581]
 gi|307218991|emb|CBV44261.1| flagellar basal body rod protein FlgF [Halomonas elongata DSM 2581]
          Length = 253

 Score =  139 bits (350), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 54/247 (21%), Positives = 94/247 (38%), Gaps = 12/247 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       ++      ++   V+ N+SN  T GFR        V      ++D ++S VA
Sbjct: 1   MDRMLYTAMSGVRQSMEQQGVVSHNLSNVSTTGFRAQLHAMRAVPVQGDGELDTRVS-VA 59

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASG 119
           +         G    TG  LD A++G+AW A++ S      TR G  +V  DG L+ ++G
Sbjct: 60  ASTPGSDFSPGPMNRTGRTLDVAMQGNAWLAVQASDGSEAYTRRGDLQVDGDG-LLRSAG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK----VIATMGLYSVDMSQGFVRRENS 175
           +  + +                          G+    + A   +  V   QG + R   
Sbjct: 119 RPVIGENGGPIQVPLGSQLSMGSDGTISAIAPGQQADALAAVGRIKLVTPEQGGLERGVD 178

Query: 176 GISPNIPPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
           G+    P        L       V  G LE SN +++  M  MI + +++   T +I+  
Sbjct: 179 GLFRAPPGEDGAVAALPADDQAQVVSGALEGSNVSAVDAMVSMIDVARRYELQTKVIETA 238

Query: 231 EKSMLEA 237
           +++   A
Sbjct: 239 DENAQRA 245


>gi|85710165|ref|ZP_01041230.1| flagellar basal-body rod protein [Erythrobacter sp. NAP1]
 gi|85688875|gb|EAQ28879.1| flagellar basal-body rod protein [Erythrobacter sp. NAP1]
          Length = 247

 Score =  139 bits (350), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 50/246 (20%), Positives = 82/246 (33%), Gaps = 8/246 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       L    A   R   VA+N++N  T GFR     F+     +++   +  S   
Sbjct: 1   MDRLIYTALTGMDASMNRQRMVANNLANASTPGFRKE--VFTVTPSTLRDGSIEARSLAK 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESP-RGIILTRDGRFKVTDDGSLVSASG 119
                          TG  LD A+EG+A  A +SP  G + +R G  +V   G L +  G
Sbjct: 59  GAVRSADMAPAKVNPTGQPLDIAVEGEALIAFQSPGGGEVYSRRGDLRVAPTGLLENGEG 118

Query: 120 KYPVLDMASV---PIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG-FVRRENS 175
              + +  +    P                + +  G+  A +    +   QG  + +   
Sbjct: 119 LPVLGESGAPVTVPAGFRVTVAPDGTLLASDPAAPGEEPAAIDRIKLASPQGSALAKGTD 178

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
                     L       V  G LE SN  +   +  MI   + F     +I    + + 
Sbjct: 179 SFLRVPGGGVLPTDPTARVIPGALEGSNVETAGTLIDMIDAQRAFEQRARIIQTAGE-LD 237

Query: 236 EAIRNI 241
           EA   +
Sbjct: 238 EASSRL 243


>gi|299531285|ref|ZP_07044695.1| flagellar basal-body rod protein FlgF [Comamonas testosteroni S44]
 gi|298720692|gb|EFI61639.1| flagellar basal-body rod protein FlgF [Comamonas testosteroni S44]
          Length = 246

 Score =  139 bits (350), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 51/244 (20%), Positives = 89/244 (36%), Gaps = 5/244 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       +    A  QR + +A N++N  T GFR     F  V   ++        F  
Sbjct: 1   MDKIIYTSMTGANAAAQRQAVLAHNLANAGTNGFRAEMSTFRSV--PLQGTGAGTRVFAL 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119
                     G    TG  LD    G AWFA++        TR+G F+++ +G LV+++G
Sbjct: 59  EATSGYQDTPGPAQRTGRALDAMAMGRAWFAVQGLDGQEAYTRNGVFEISPEGQLVNSNG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS--QGFVRRENSGI 177
           +  + D  +     P+                 ++   +G   +        + R + G 
Sbjct: 119 QAVLSDGGAPIDIPPESTISLGSDGTLTAKMGNQLPVAVGRVKLVTPPVDEPLVRGDDGF 178

Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                   L +     +  G +E SN NS+  M  MI  +++F     L+   E +   A
Sbjct: 179 FRAAQGDALPNDETARLLSGSIEGSNVNSVETMVGMIAASRQFEQQMKLLQTAETNDKSA 238

Query: 238 IRNI 241
            + +
Sbjct: 239 SQLL 242


>gi|238796905|ref|ZP_04640409.1| Flagellar basal-body rod protein flgF [Yersinia mollaretii ATCC
           43969]
 gi|238719165|gb|EEQ10977.1| Flagellar basal-body rod protein flgF [Yersinia mollaretii ATCC
           43969]
          Length = 251

 Score =  139 bits (350), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 56/252 (22%), Positives = 95/252 (37%), Gaps = 13/252 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A  A   R   V++N++N  T GFR     F  V   ++    Q  + V 
Sbjct: 1   MDRAIYTAMGAANAALNRQGVVSNNLANASTTGFRAQLSAFRAV--PVEGPSVQTRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
               Y    +G+   TG  LD AL  D W A+E P  G   TR G  ++  +G L+   G
Sbjct: 59  ESTPYHDDSMGAINQTGRNLDVALPQDGWLAVELPDGGEGYTRAGNIEIDSEG-LLKVRG 117

Query: 120 KYPVLDMASVPIQIPQKDEIFNV---GEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
              + D   + +    +  I        +G   +   +     L  V+     +   + G
Sbjct: 118 LPVIGDGGPINVPPQSELTIAPDGTITARGAGEEPSALAQVGRLKMVNAKLQDLSHGDDG 177

Query: 177 IS------PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
           +       PN     L     + +  G LE SN + +  M  MI   + F+    +I   
Sbjct: 178 LFHIAETSPNAGLAALPADQNLQLVPGALESSNVSPVKSMVDMIATARGFDMNMKVISAV 237

Query: 231 EKSMLEAIRNIA 242
           + +  +A + +A
Sbjct: 238 DDNDKKANQLLA 249


>gi|118581835|ref|YP_903085.1| hypothetical protein Ppro_3435 [Pelobacter propionicus DSM 2379]
 gi|118504545|gb|ABL01028.1| protein of unknown function DUF1078 domain protein [Pelobacter
           propionicus DSM 2379]
          Length = 259

 Score =  139 bits (349), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 50/255 (19%), Positives = 101/255 (39%), Gaps = 15/255 (5%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
           ++   G+   LA  + ++ + +N++N +TVGF+  +  FS+++     +  Q        
Sbjct: 5   SAMLTGVTGLLANAEDINVIGNNLANVNTVGFKGSRTLFSDLLSTNIGNDSQIGRGTQIQ 64

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASGKY 121
           K        SF +T    D A++G ++F LES  G    TR G F++ +DG LV+  G +
Sbjct: 65  KVDNIISQSSFDTTEITSDLAIQGSSFFLLESTTGSRYVTRAGAFRMNEDGYLVNPDGYF 124

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM------GLYSVDMSQGFVRRENS 175
            + +  +  +  P    I ++  +GEI+      AT       G+ ++       +   +
Sbjct: 125 VLDEAGARILLDPAGTTITSIDSEGEITYVDSANATQTYGTKIGVATIPNVGALQKAGGT 184

Query: 176 GISPNIPPTPL--------EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
                               D     +    LE SN +   +  ++I   Q + + +  I
Sbjct: 185 LYDVAASVAAGSGAITPSAADGVVNKIYSNSLEASNVDMASQFVRLIQTQQAYTANSKTI 244

Query: 228 DENEKSMLEAIRNIA 242
              ++     +  I 
Sbjct: 245 TTADEMTDVVLNLIR 259


>gi|269836598|ref|YP_003318826.1| hypothetical protein Sthe_0566 [Sphaerobacter thermophilus DSM
           20745]
 gi|269785861|gb|ACZ38004.1| protein of unknown function DUF1078 domain protein [Sphaerobacter
           thermophilus DSM 20745]
          Length = 247

 Score =  139 bits (349), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 55/250 (22%), Positives = 101/250 (40%), Gaps = 15/250 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVV-----GAIKNDI 52
           M  S     AA +A   R  T+++N++N  T G++  +     F E+      G     I
Sbjct: 1   MIRSMYQAAAAMMAEFSRQLTISENLANVSTPGYKARRTTVQDFREMFLSRFAGGSATPI 60

Query: 53  DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDG 112
               + V   +  +    G+ + TG  LD A+ G A+FA+++P  +  TRDGRF++  D 
Sbjct: 61  GSISTAVRPEERAIDLSQGALVETGRPLDLAIAGTAFFAVQTPDDVQYTRDGRFQLDADR 120

Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172
            LV+  G      +  +   I   +   +V   G I   G     + L            
Sbjct: 121 RLVTGDG----FPVLGLNGPITLPEGDIHVTADGTILVNGAPAGQLQLVEFPPD---TPI 173

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
           E  G +        +      V +GF+E SN +    M +M+  ++ +     ++  ++ 
Sbjct: 174 EAVGQNRFAIEGAGQQSETAGVSQGFVEQSNVDLAQSMVEMLEASRSYALAQRMLQVSDA 233

Query: 233 SMLEAIRNIA 242
           ++  A+  I 
Sbjct: 234 TLGTAVNEIG 243


>gi|194014627|ref|ZP_03053244.1| flagellar basal-body rod protein FlgG (Distal rod protein)
           [Bacillus pumilus ATCC 7061]
 gi|194013653|gb|EDW23218.1| flagellar basal-body rod protein FlgG (Distal rod protein)
           [Bacillus pumilus ATCC 7061]
          Length = 263

 Score =  139 bits (349), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 50/260 (19%), Positives = 98/260 (37%), Gaps = 21/260 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++     + +L  VA+N++N +T G++  ++ F ++V    +          
Sbjct: 1   MLRSLYSGISGMKNFQTKLDVVANNVANVNTHGYKKSRITFKDMVSQTISSSGGPTNNSG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                Q     +          G+  +T  + DF + GD +F +E    ++ TR G F  
Sbjct: 61  SINSKQVGLGSSLSSIDKIMSAGASQNTDRDYDFYINGDGFFRIEKQGEVLYTRAGNFTR 120

Query: 109 TDDGSLVSASGKYPVLDMAS---VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
             +GSL ++ G Y +        +P  I       +       +   + +  + L S   
Sbjct: 121 DSEGSLTTSDGNYVLGMNGQKITIPDGISSVSVGPDGTISVVENNVSRNVGQVSLVSFSN 180

Query: 166 SQGFVRRENSGISPN----IPPTPLEDLSGVT--VKRGFLEDSNANSMYEMGQMIHLTQK 219
           + G  +   +          P  P+      T  ++ G LE SN +   E  +MI   + 
Sbjct: 181 AAGLDKVGENLYRQTLSSGAPSNPIVPGEQGTGIIQTGRLEMSNVDLTDEFTEMIIAQRG 240

Query: 220 FNSITTLIDENEKSMLEAIR 239
           F S    I  +++ + E + 
Sbjct: 241 FQSNAKTITTSDEILQELVN 260


>gi|109899401|ref|YP_662656.1| flagellar basal-body rod protein FlgF [Pseudoalteromonas atlantica
           T6c]
 gi|109701682|gb|ABG41602.1| flagellar basal-body rod protein FlgF [Pseudoalteromonas atlantica
           T6c]
          Length = 247

 Score =  139 bits (349), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 50/246 (20%), Positives = 94/246 (38%), Gaps = 8/246 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     I  +         +  A+N++NT T GFR    +   +      +      F  
Sbjct: 1   MDKLLYIAASGAKQDLLGTAVRANNLANTQTTGFRAQLEQARSM--PAFGEGLPTRVFSM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASG 119
           +     + E G+ I T  ELD A++G+ W ++ ++      +R+G  +++ DG L  +SG
Sbjct: 59  TENPANNFEGGAMIQTERELDVAIQGEGWLSVLDANGAEAYSRNGSLQISADGQLQDSSG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
              + +   V + IP  +          +  +G     +        V+ +   + R N 
Sbjct: 119 NSILGEFGPVFLPIPLSNINIAGDGTISVRPQGAPETVLEEVGRLKLVNPALDNIDRGND 178

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
           G+         +    V+++ G LE SN N + EM  MI L + +      + E      
Sbjct: 179 GLFRQKDGELAQFDPTVSIRNGMLEGSNVNPVEEMVDMISLQRHYEMQIKFMKEASDLDS 238

Query: 236 EAIRNI 241
            A   +
Sbjct: 239 RA-NQL 243


>gi|254520946|ref|ZP_05133001.1| flagellar basal-body rod protein FlgF [Stenotrophomonas sp. SKA14]
 gi|219718537|gb|EED37062.1| flagellar basal-body rod protein FlgF [Stenotrophomonas sp. SKA14]
          Length = 249

 Score =  139 bits (349), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 52/253 (20%), Positives = 90/253 (35%), Gaps = 14/253 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  + +    A  Q   T++ N++N+DT GF+            I+           
Sbjct: 1   MDKALYVAMTGARASLQAQGTLSHNLANSDTPGFKEALANTEAF--PIRGPGFASRVDAL 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119
                 ++  G+   TG  LD AL+   W A   +      TR     VT +G LV++SG
Sbjct: 59  HVDAGFNRRPGAQHITGKPLDLALQTGTWLAVQSTDGSEAYTRGAALSVTPNGQLVTSSG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172
           +  + D  +         +   +G  G IS   +      +  V          +   R 
Sbjct: 119 RPVLDDNNNPIAI--PPYQAMEIGADGTISIIPQGEGPQTMAQVGRIKVVQAPDERLERG 176

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            +       P  P     G  V  G LE SN ++   + QMI L +++     +I   + 
Sbjct: 177 LDGLFRNTDPQQPFAPAQGTAVHSGQLEGSNVDAAGALVQMIQLQRQYEMQVQVIKHGDD 236

Query: 233 SMLEA--IRNIAS 243
           +   A  +  + S
Sbjct: 237 NARSANSLLRLGS 249


>gi|103488387|ref|YP_617948.1| protein of unknown function DUF1078-like protein [Sphingopyxis
           alaskensis RB2256]
 gi|98978464|gb|ABF54615.1| protein of unknown function DUF1078-like protein [Sphingopyxis
           alaskensis RB2256]
          Length = 275

 Score =  139 bits (349), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 41/271 (15%), Positives = 91/271 (33%), Gaps = 36/271 (13%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS-- 61
           SF   L+   A +  +S +++N++N   VGF+  K +F ++  +      + I+   +  
Sbjct: 2   SFYTSLSGLKASQTDMSVISNNIANAGAVGFKRSKAQFGDIFASSPTQSTKMIAGQGTRL 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFA---LESPRGIILTRDGRFKVTDDGSLVSAS 118
                    GS+ S+   LD A+ G+  F          +  TR+G F+ T DG ++  +
Sbjct: 62  NGITQQFTQGSYESSEKTLDLAIVGEGLFIVKGEPPREQVSYTRNGSFEPTPDGYVIDTT 121

Query: 119 GKYPVL--------------------------DMASVPIQIPQKDEIFNVGEKGEISQKG 152
           G    L                                  +     +  +      + + 
Sbjct: 122 GARLQLLPVDAVGNVTDNTLAGAFDFQLPTGAPSDPASALVNVTIGLDGLVTATFANGED 181

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSM 207
           +++  + + +     G     ++         P       +     ++ G LE SN +  
Sbjct: 182 QMLGKVAMATFPTMSGLRPTGDAHWQSTGESGPPTIDAATNGPMGAIRSGALERSNVDIT 241

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            E+  ++   + F +    I+   +     I
Sbjct: 242 EELVMLMAAQRNFQANAKAIEGASQLTQTII 272


>gi|315497882|ref|YP_004086686.1| flagellar basal-body rod protein flgf [Asticcacaulis excentricus CB
           48]
 gi|315415894|gb|ADU12535.1| flagellar basal-body rod protein FlgF [Asticcacaulis excentricus CB
           48]
          Length = 249

 Score =  139 bits (349), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 47/247 (19%), Positives = 102/247 (41%), Gaps = 6/247 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIK--VKFSEVVGAIKNDIDQKISF 58
           M  +  + L+ QL L + L   A+N++N +T G++  +  V+  E   A    I    +F
Sbjct: 1   MDNASYVALSRQLVLRRELDVTANNLANMNTNGYKFEQLLVEPEEGRPAYNLPIRAPANF 60

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGD-AWFALESPRGIILTRDGRFKVTDDGSLVSA 117
                       G+  +TG + D  +EG+ A+F +    G + TRDG F V+  G LV+ 
Sbjct: 61  AYDKGVGRDFSQGALTTTGGDYDVGIEGEGAFFVINGANGPLYTRDGAFTVSPQGVLVTG 120

Query: 118 SGKYPVLDMASV--PIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
            G     D   +    +        +       +     +  + +          ++ ++
Sbjct: 121 DGLPVQGDGGEIRLNPEFGAPSISADGVVSQRSTDGIVRVGRISVVRFASLSDLEKQGDN 180

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
                    P +      +++G +E SN N++ E+ +++ + + + S+T +I++  +   
Sbjct: 181 RFRATTNVAP-DPAPDARLRQGMIETSNVNALSEVTRLVEINRAYASVTKIIEQQAELNR 239

Query: 236 EAIRNIA 242
            A+  + 
Sbjct: 240 SAVERLG 246


>gi|220934395|ref|YP_002513294.1| flagellar basal-body rod protein FlgF [Thioalkalivibrio sp.
           HL-EbGR7]
 gi|219995705|gb|ACL72307.1| flagellar basal-body rod protein FlgF [Thioalkalivibrio sp.
           HL-EbGR7]
          Length = 246

 Score =  139 bits (349), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 44/237 (18%), Positives = 90/237 (37%), Gaps = 6/237 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + ++         +    N++N +T GF+     F+     +        ++  
Sbjct: 1   MDRMLYVAMSGAKETALTQARNTQNLANANTTGFKASLDVFTS--KQVVGPGHGTRTYAL 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +    +    G   +TG +LD A++G+ W A+++P      TR G  +V   G L + +G
Sbjct: 59  TQDMKVDLSPGPLQATGRDLDVAVQGNGWIAVQAPDGTEAYTRAGDLRVDSVGLLTTGTG 118

Query: 120 KYPVLDMAS---VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
              + +       P +  +      +  +        +     +  V+ +   + R   G
Sbjct: 119 LPVLGEGGPIAVPPFETFEIGSDGTISIRPLGQGANVLAEVDRIKLVNPNPDELVRGEDG 178

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           +  +         +GVT+ RG LE SN N++  M  MI L + F     ++   E +
Sbjct: 179 LIRHQLGVEQPPDAGVTLVRGMLESSNVNTVEAMVNMIDLARHFEMQVKMMKTAEDN 235


>gi|221069321|ref|ZP_03545426.1| flagellar basal-body rod protein FlgF [Comamonas testosteroni KF-1]
 gi|220714344|gb|EED69712.1| flagellar basal-body rod protein FlgF [Comamonas testosteroni KF-1]
          Length = 246

 Score =  139 bits (349), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 51/244 (20%), Positives = 89/244 (36%), Gaps = 5/244 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       +    A  QR + +A N++N  T GFR     F  V   ++        F  
Sbjct: 1   MDRIIYTSMTGANAAAQRQAVLAHNLANAGTNGFRAEMSTFRSV--PLQGTGAGTRVFAL 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119
                     G    TG  LD    G AWFA++        TR+G F+++ +G LV+++G
Sbjct: 59  EATSGYQDTPGPAQRTGRALDAMAMGRAWFAVQGLDGQEAYTRNGVFEISPEGQLVNSNG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS--QGFVRRENSGI 177
           +  + D  +     P+                 ++   +G   +        + R + G 
Sbjct: 119 QAVLSDGGAPIDIPPESTISLGSDGTLTAKMGNQLPVAVGRVKLVTPPVDEPLVRGDDGF 178

Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                   L +     +  G +E SN NS+  M  MI  +++F     L+   E +   A
Sbjct: 179 FRAAQGDALPNDETARLLSGSIEGSNVNSVETMVGMIAASRQFEQQMKLLQTAETNDKSA 238

Query: 238 IRNI 241
            + +
Sbjct: 239 SQLL 242


>gi|254511077|ref|ZP_05123144.1| flagellar basal-body rod protein FlgF [Rhodobacteraceae bacterium
           KLH11]
 gi|221534788|gb|EEE37776.1| flagellar basal-body rod protein FlgF [Rhodobacteraceae bacterium
           KLH11]
          Length = 236

 Score =  138 bits (348), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 66/241 (27%), Positives = 122/241 (50%), Gaps = 7/241 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M ++  + L+ Q  L   +  VA+N++N +T G+R   V FSE +  + ++    +S   
Sbjct: 1   MDSA-YVTLSRQSGLMNEMRMVANNIANANTTGYRQQGVVFSEFIRDMPDN--PSLSLTR 57

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           +     S + G    TG   DFA+EGD +F +E+P G  LTR G F    +G LV+  G 
Sbjct: 58  AEVRNTSLQQGVLTETGGSFDFAIEGDGFFMVETPAGNRLTRAGSFSPNAEGDLVTMDGH 117

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
              L+    P+ +P      +VG  G +S +G+++  +G+Y+V   Q  VR   + + P 
Sbjct: 118 RV-LNSNGAPVFVPPDAAAIDVGSDGTLSVEGQLLGQLGVYTVADPQNLVREGRTYLRPA 176

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
               P+++   V     FLE SN N++ ++ +MI + + +    + +D  ++ +  A++ 
Sbjct: 177 GQVDPVDEPVVV---HRFLEGSNVNAIGQVTRMIEIQRAYELGQSFLDAEDERVRGALKA 233

Query: 241 I 241
           +
Sbjct: 234 L 234


>gi|311992327|gb|ADQ26737.1| proximal rod protein [Aeromonas hydrophila]
          Length = 247

 Score =  138 bits (348), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 50/239 (20%), Positives = 102/239 (42%), Gaps = 10/239 (4%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
                I ++        L+  ++N++N +T GF++   +   +      +      F  +
Sbjct: 1   DHLLYIAMSGAKESMNSLAVRSNNLANANTTGFKSDFEQARSM--QAFGEGLPTRVFAMA 58

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASGK 120
            +   + + G  ++TG +LD A++G  W A++ P+G    TR G  +++  G+L +++G 
Sbjct: 59  ERPGQNLQHGMLMTTGRDLDVAVDGQGWIAVQDPKGGEAYTRMGNLQLSATGNLQTSTGL 118

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV------DMSQGFVRREN 174
             V D    PI +P   E   +   G IS + +  A     +       + +   V +  
Sbjct: 119 NVV-DDGGQPIVLPLPMEKIEINRDGTISGRPEGAAANLPENFQRIKLVNPAVDAVEKGQ 177

Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
            G+            + V +  G LE SN N + EM  +I L ++F +   ++   E++
Sbjct: 178 DGLFRRKDGQNEAASATVGLIAGSLEGSNVNVVDEMTNLIRLQRQFETQVKIMKTAEEN 236


>gi|327441046|dbj|BAK17411.1| flagellar basal body rod protein [Solibacillus silvestris StLB046]
          Length = 329

 Score =  138 bits (348), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 44/326 (13%), Positives = 92/326 (28%), Gaps = 87/326 (26%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++     + +L  + +N+SN +T G++  +  F +++   ++          
Sbjct: 1   MLRSMYSGISGLKNFQTKLDVIGNNISNVNTYGYKKERTIFKDLISQTQSGASGPSTTRG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG----------- 97
                Q                G+  +TG  LD A+ GD +F +                
Sbjct: 61  GVNAIQVGLGSQLAAIDTIHNAGAMQTTGRTLDLAISGDGFFMVADATDFVQGDPANGEP 120

Query: 98  --------IILTRDGRFKVTDDGSLVS--------------------------------- 116
                    + TR G F +  +G LV+                                 
Sbjct: 121 ATAGGYTSTLYTRAGNFYMDRNGFLVNGDGKYLVGFAGDVTAYDAINPLNAPGSGFEQNK 180

Query: 117 ------------------ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158
                             A G      +                    + +   +   T+
Sbjct: 181 PEVAGGTNLIDPATGELIAQGGTTPSPIRIPTTAQSMSISQDGSISFVDSAGDLQYAGTI 240

Query: 159 GLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQM 213
            L     S G  +  ++          +           ++  GF+E SN +   E  +M
Sbjct: 241 VLAKFANSGGLEKTGSNYFQTTPNSGAIYAQLATQDGIGSINSGFMEMSNVDLSEEFTEM 300

Query: 214 IHLTQKFNSITTLIDENEKSMLEAIR 239
           I   + F + + +I  +++ + E + 
Sbjct: 301 IVAQRGFQANSRIITTSDEILQELVN 326


>gi|315125985|ref|YP_004067988.1| FlgFL [Pseudoalteromonas sp. SM9913]
 gi|315014499|gb|ADT67837.1| FlgFL [Pseudoalteromonas sp. SM9913]
          Length = 243

 Score =  138 bits (348), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 48/234 (20%), Positives = 91/234 (38%), Gaps = 4/234 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M+      ++        L   A+N++N  TVGF+    +   ++  ++ +  +      
Sbjct: 1   MEKLIYTAVSGAELNNTALRVAANNLANVSTVGFKADLEQAQSMM--VQGEGFRTRYHAQ 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASG 119
                     G  + TG  LD AL    +  +    G    TR G   V  DG  V+ +G
Sbjct: 59  LTPVTTDLSSGPIMDTGRNLDIALSNGGYLEVMDDNGEPAYTRAGNLVVDADG-FVTVNG 117

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
           +    D   + +      EI + G        G VIA      +  +   + +   G+  
Sbjct: 118 RRVQGDGGDIQLPEFGDIEIGSNGMINLTPIGGGVIAEDAQIKLASTDANLIKGADGLLR 177

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
                PLE    +TV+ G LE SN N++ EM + ++++++F     ++   ++ 
Sbjct: 178 ANDLQPLEADETITVRTGALEGSNVNAVAEMIKTMNISRQFEMNVKMMKSADEL 231


>gi|87119675|ref|ZP_01075572.1| hypothetical protein MED121_07040 [Marinomonas sp. MED121]
 gi|86165151|gb|EAQ66419.1| hypothetical protein MED121_07040 [Marinomonas sp. MED121]
          Length = 247

 Score =  138 bits (348), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 49/233 (21%), Positives = 99/233 (42%), Gaps = 6/233 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  + ++    +    +  A+N++N +T GFR    +   +   +  +      +  
Sbjct: 1   MDRALYLAMSGGKQIMHAQTVRANNLANVNTTGFRADFEQARAM--PVYGEHYASRVYSM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASG 119
           +       E G+ I T   LD A++GD + A+ +       TR G  ++T +G LV+ SG
Sbjct: 59  TENPATRYESGALIQTDRPLDIAMQGDGFIAVLDHQGAEAYTRSGDLQITANGQLVNGSG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV--IATMGLYSVDMSQ-GFVRRENSG 176
              +     + +    K  I   G    + + G    +AT+G   +       + +   G
Sbjct: 119 LPIMGARGPIFLPPIDKISIGEDGTISIVPEGGSAAEVATIGQIKLVNPDTQLIEKGTDG 178

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           +      TP E      +K GFLE SN +++ E+ +++ L+++F     ++D 
Sbjct: 179 LLRAKAGTPFEQDFTAALKSGFLESSNVSAVEELTKIMSLSRQFEMNIKVMDT 231


>gi|73539451|ref|YP_299818.1| flagellar basal body rod protein FlgF [Ralstonia eutropha JMP134]
 gi|72122788|gb|AAZ64974.1| Protein of unknown function DUF1078 [Ralstonia eutropha JMP134]
          Length = 247

 Score =  138 bits (348), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 50/246 (20%), Positives = 87/246 (35%), Gaps = 8/246 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       L+    +  + + V++N++N  T  FR     +  V   +        +F  
Sbjct: 1   MDRMIYTALSGAKQILDQQAAVSNNLANVSTPAFRAQVNMYRAV--PVVGQESPTRAFTL 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASG 119
           +         G    TG  LD AL+G+ W  ++        TR G  ++  DG + ++SG
Sbjct: 59  ASTPGADMRAGPLTYTGRPLDVALQGNGWLVVQARDGSEAYTRAGSLQIAQDGQVQTSSG 118

Query: 120 KYPVLDM---ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
              + D    +  P           +  +G       +     L  V+     + R + G
Sbjct: 119 LPVMGDGGPLSVPPGSQVTIGSDGTITARGPGEASAGLAQVGKLRVVNPPADSIARGDDG 178

Query: 177 ISPNIPP-TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
           +    P   PLE    V V  G +E SN N    M  MI   ++F     +I   + +  
Sbjct: 179 LFRLRPGAQPLEADPTVRVVSGAIEGSNVNPTEAMVDMIANARRFEMQMKMITGADTNDQ 238

Query: 236 EAIRNI 241
            A   +
Sbjct: 239 RA-NQL 243


>gi|82702454|ref|YP_412020.1| flagellar basal body rod protein FlgF [Nitrosospira multiformis
           ATCC 25196]
 gi|82410519|gb|ABB74628.1| conserved hypothetical protein [Nitrosospira multiformis ATCC
           25196]
          Length = 250

 Score =  138 bits (348), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 53/248 (21%), Positives = 97/248 (39%), Gaps = 9/248 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + +        + + V+ N++N +T G+R        V   + +D     +FV 
Sbjct: 1   MDRMIYVAMTGAKHALGQHAAVSHNLANANTPGYRAEINALRAV--PVFSDTLATRAFVV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASG 119
                     G+  +T  ELD A++G  W A++ +      TR+G   V+ +G L +  G
Sbjct: 59  DSSVGADFRPGTVQNTARELDVAIQGAGWIAVQLADGSEAYTRNGDLHVSANGVLQTRDG 118

Query: 120 KYPVLD------MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRE 173
              + D        +  + I     I  V      S+    +A   +  V+  +  + R 
Sbjct: 119 LNVLGDTGLISIQPNAKVTIGTDGTISTVPAGAGTSEPNLAVAVGRIKLVNPPEAQLVRG 178

Query: 174 NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           + G+         E    VT+  G LE SN N +  M  MI L+++F +   L+   E +
Sbjct: 179 SDGLFRLSGGGEAEADGNVTLSSGALEGSNVNVVEAMVDMISLSRQFETHMKLLQNAEGN 238

Query: 234 MLEAIRNI 241
              A + +
Sbjct: 239 AQRASQLL 246


>gi|308050371|ref|YP_003913937.1| flagellar basal-body rod protein FlgF [Ferrimonas balearica DSM
           9799]
 gi|307632561|gb|ADN76863.1| flagellar basal-body rod protein FlgF [Ferrimonas balearica DSM
           9799]
          Length = 245

 Score =  138 bits (347), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 44/238 (18%), Positives = 94/238 (39%), Gaps = 7/238 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     I  +       +L++ A+N++N  + GF+    +   +      +      F  
Sbjct: 1   MDNYLYIAASGAKQNLHQLASHANNLANAKSDGFKADMSQARAM--QAFGEGLPTRVFAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119
           + +   + + G+  +TG  LD A++   WF   +      LTR G  +  + G L+++ G
Sbjct: 59  TERPATNFDPGAIKTTGRTLDVAIKDQGWFVVQDDGGNEALTRAGSLRFDEAGMLMNSEG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM----GLYSVDMSQGFVRRENS 175
           +  +     + + +P +           +  +G     M     L  V+     + +   
Sbjct: 119 QPIMGLAGPIFLPLPIEKVEIAQDGMITVRPQGAPANAMEEVGQLRLVNPPLNSLTKGED 178

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           G+   +   P  +   VT+  G +E SN N + E+  MI   ++F+    L+   E++
Sbjct: 179 GLFRRLDGQPYANAVEVTLVTGAVEGSNVNPVNELVGMIEAQRQFDMQLKLMKTAEEN 236


>gi|126738579|ref|ZP_01754284.1| flagellar basal-body rod protein FlgF [Roseobacter sp. SK209-2-6]
 gi|126720378|gb|EBA17084.1| flagellar basal-body rod protein FlgF [Roseobacter sp. SK209-2-6]
          Length = 238

 Score =  138 bits (347), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 66/241 (27%), Positives = 116/241 (48%), Gaps = 6/241 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    L+ Q  L + +  VA+N++N+ T G+R+  + FSE V +      Q +S   
Sbjct: 1   MGATSYTTLSRQSGLMREMRVVANNIANSATTGYRSEGLIFSEYVQSSPGQ--QSLSMSR 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           +     S E G    TG   DFA+EG+ +F +E+P G  LTR G F    +G LV+  G 
Sbjct: 59  ANIYNTSLEQGQLTKTGGTFDFAIEGEGFFMVETPMGERLTRAGAFSPNAEGDLVTMDGY 118

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
              +D    P+ +P   +   VG  G I+  G  I  +GL+        VR +       
Sbjct: 119 RV-MDAGGSPVFVPGSAQSIEVGADGTITADGNSIGQIGLFRPADKNTMVREDGVMFRVE 177

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
               P E+   V + +G+ E SN N++ ++ +MI + + +    + ++  ++ + +AI+N
Sbjct: 178 GDIDPAEN---VAMLQGYTEGSNVNAIGQVTRMIEIQRAYEMGQSFLETEDRRIRDAIKN 234

Query: 241 I 241
           +
Sbjct: 235 L 235


>gi|261409668|ref|YP_003245909.1| fagellar hook-basal body protein [Paenibacillus sp. Y412MC10]
 gi|261286131|gb|ACX68102.1| fagellar hook-basal body protein [Paenibacillus sp. Y412MC10]
          Length = 275

 Score =  138 bits (347), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 54/279 (19%), Positives = 101/279 (36%), Gaps = 42/279 (15%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--------- 51
           M  S    + +  AL+QRL  +ADNM+N +T G++  +  F +V+  ++           
Sbjct: 1   MNNSMISAMVSMNALQQRLDVIADNMANVNTAGYKKKEASFEDVLTQVQGHHKDFDRTGR 60

Query: 52  ----IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107
                      +       + E G+   TG  LD  ++G A FA++    I  TR+G F 
Sbjct: 61  ATPLGYTLGYGMRLSSVVPNMEQGAMKETGNPLDLMIDGQAMFAVQGDGAIGYTREGGFH 120

Query: 108 VTD-------------DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEIS----- 149
           V+               G  V      P+   A   + I ++ +I      G  +     
Sbjct: 121 VSPDARNPNNLLLVNSQGYPVLDVNDNPISLPAKGKVAINERGQIIVETPTGGRTAPYAT 180

Query: 150 ------QKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSN 203
                 ++ + +  +G     +  G    +    +P  P  P        V  GF+E SN
Sbjct: 181 LKLVELERPEGLVAVGDNLFVLGNGLAEGDVFDTTPPAPGEP----PKSKVLSGFVEQSN 236

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            N   E+ +M+ + + +      +  ++  M      + 
Sbjct: 237 VNLTDELTKMMEVQRAYQLTARALSSSDTMM-NLANTMR 274


>gi|167750705|ref|ZP_02422832.1| hypothetical protein EUBSIR_01683 [Eubacterium siraeum DSM 15702]
 gi|167656384|gb|EDS00514.1| hypothetical protein EUBSIR_01683 [Eubacterium siraeum DSM 15702]
 gi|291532044|emb|CBK97629.1| fagellar hook-basal body proteins [Eubacterium siraeum 70/3]
 gi|291558218|emb|CBL35335.1| fagellar hook-basal body proteins [Eubacterium siraeum V10Sc8a]
          Length = 242

 Score =  138 bits (347), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 45/249 (18%), Positives = 98/249 (39%), Gaps = 15/249 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID---QKIS 57
           M  +F  G    +A ++ L+  ++N++N +TVGF+  +  F++ +  ++ + +   Q   
Sbjct: 1   MNIAFYTGKTGLIAQQEGLNVYSNNIANVNTVGFKASRPSFADCIYTVQRNTEPDWQTGH 60

Query: 58  FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR--GIILTRDGRFKVTDDG--S 113
                   L    G F  T  +LDFA+  +  F     +   +  TR G F+++  G   
Sbjct: 61  GEYVHSTQLMYSEGVFTYTDNDLDFAIPTEEGFFAVMDKYGDVNYTRAGDFQMSQIGDHW 120

Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRE 173
            + ++    VLD     I +P         E         +   +G+Y+ D + G     
Sbjct: 121 ELVSANGEFVLDYEGNHITVP-------FIEGTSKPDYEALTKMIGVYTFDNNFGLELLG 173

Query: 174 NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           ++ ++             +   R  LE SN +   +M ++I   + +     ++   ++ 
Sbjct: 174 SNKMTATERSGEAVADRSIDKIRMALERSNTDIAGDMVRIIETQRSYQMSARVVQTADE- 232

Query: 234 MLEAIRNIA 242
           +     N+ 
Sbjct: 233 LERITNNLR 241


>gi|83955137|ref|ZP_00963793.1| Flagellar basal body rod protein [Sulfitobacter sp. NAS-14.1]
 gi|83840466|gb|EAP79639.1| Flagellar basal body rod protein [Sulfitobacter sp. NAS-14.1]
          Length = 259

 Score =  138 bits (347), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 51/244 (20%), Positives = 101/244 (41%), Gaps = 5/244 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + L+    L + + T A N++N  T G++ I      +        D  I++V 
Sbjct: 17  MTNISYVALSQATVLTRNMDTTAHNLANATTSGYKAIHPVLESIP---DGSGDNAINYVR 73

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLVSASG 119
               YL    G  + TG  +D A+ GD W + + P G    +R GR  V  DG L +A G
Sbjct: 74  ESGTYLELTDGPLMQTGNPMDIAVAGDGWLSFQLPGGETGYSRHGRLVVDVDGQLKTAGG 133

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEIS-QKGKVIATMGLYSVDMSQGFVRRENSGIS 178
              +       +      +   +   G ++  +G V+  + + +++ +   +        
Sbjct: 134 MPLLGVGGGPVVLPDDVGDEVVITTSGTVTNPQGAVLGAVSVVAINEAAQMLPMGAGMYQ 193

Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
                   + +    VK+GF+E SN N++ EM ++I + + + +   L+  ++     AI
Sbjct: 194 LPPNAGQPQQMENPQVKQGFIEGSNVNAVLEMTRLIDIQRAYENSVKLMGSDDDLTRTAI 253

Query: 239 RNIA 242
           + + 
Sbjct: 254 QKLG 257


>gi|332994161|gb|AEF04216.1| flagellar basal-body rod protein FlgF [Alteromonas sp. SN2]
          Length = 247

 Score =  138 bits (347), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 54/238 (22%), Positives = 92/238 (38%), Gaps = 7/238 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     I  +            A+N++N  T GFR    +   +      +      F  
Sbjct: 1   MDKLLYIAASGASQDLLGTGLRANNLANAQTTGFRAQLEQARSM--PAYGEGLPSRVFSM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +     + E G  I TG +LD A++GD WFA++        +RDG FK+ DDG L     
Sbjct: 59  TESPSNNYESGPMIQTGRDLDVAIQGDGWFAVQDDNGQEAYSRDGNFKLGDDGILTDVHN 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
           +  + D   + + +P  +    +     + Q G     +        V  +   + R   
Sbjct: 119 RPVLGDNGPIFLPVPLDNLDIGMDGTLSMRQLGAPENVIEDVGRLKLVKPNYADMERGTD 178

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           G+      T     +GV V  G LE SN N++ EM  MI L + +     ++ + ++ 
Sbjct: 179 GLFRMEDGTVAPASAGVKVMSGMLEGSNVNAVDEMVNMISLQRHYELQVKMMKQADEL 236


>gi|332533174|ref|ZP_08409043.1| flagellar basal-body rod protein FlgF [Pseudoalteromonas
           haloplanktis ANT/505]
 gi|332037456|gb|EGI73910.1| flagellar basal-body rod protein FlgF [Pseudoalteromonas
           haloplanktis ANT/505]
          Length = 244

 Score =  138 bits (347), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 49/238 (20%), Positives = 95/238 (39%), Gaps = 7/238 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
              I  +      Q L+  A+N++N +T GF+    +   +      +      F    +
Sbjct: 1   MVYIAASGAKQSLQGLALKANNLANANTTGFKADFAQARSM--QAFGEGLPTRVFSMQER 58

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122
              +   G  + TG +LD A+  +AW A++        T+ G   VT  G LV++ G+  
Sbjct: 59  PGSNMVSGGIVQTGRDLDIAMSDNAWLAVQDASGNEAYTKVGTLNVTAQGMLVTSHGRQV 118

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS----VDMSQGFVRRENSGIS 178
           + +   V + +P +   F+     ++  +G     +        V+ +   + + N G+ 
Sbjct: 119 IGEGGPVILPVPVEKIGFSQDGAIQVRPQGAPANFLEEIDTLRVVEANSSQLEKGNDGLF 178

Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                  ++  + V V  G LE SN N ++EM  MI   ++F     L+   E+    
Sbjct: 179 RPKANVTVDTSANVKVLSGSLEMSNVNPVHEMVDMISHQRQFELQVKLMKTAEEIDER 236


>gi|83747653|ref|ZP_00944689.1| FlgF [Ralstonia solanacearum UW551]
 gi|207728347|ref|YP_002256741.1| flagellar basal-body rod protein flgf [Ralstonia solanacearum
           MolK2]
 gi|207739736|ref|YP_002258129.1| flagellar basal-body rod protein flgf [Ralstonia solanacearum
           IPO1609]
 gi|300696914|ref|YP_003747575.1| flagellar component of cell-proximal portion of basal-body rod
           [Ralstonia solanacearum CFBP2957]
 gi|83725705|gb|EAP72847.1| FlgF [Ralstonia solanacearum UW551]
 gi|206591593|emb|CAQ57205.1| flagellar basal-body rod protein flgf [Ralstonia solanacearum
           MolK2]
 gi|206593118|emb|CAQ60024.1| flagellar basal-body rod protein flgf [Ralstonia solanacearum
           IPO1609]
 gi|299073638|emb|CBJ53158.1| flagellar component of cell-proximal portion of basal-body rod
           [Ralstonia solanacearum CFBP2957]
          Length = 245

 Score =  138 bits (347), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 48/244 (19%), Positives = 92/244 (37%), Gaps = 6/244 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + +     L  + +  A+N++N+ T GF+     F  V   ++ D     SFV 
Sbjct: 1   MDRMIYVAMTGAKHLFDQQAASANNLANSSTTGFKAQIDAFHTV--GVQGDGSPTRSFVM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G   +TG  LD A++G  +FA+++       TR G F+V+ DG++ + SG
Sbjct: 59  ASAIGTDMTPGPIETTGRSLDVAIDGQGFFAVQTADGSEAYTRAGAFQVSADGTIETLSG 118

Query: 120 KYPVLDMASV--PIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177
           +  + D   V  P     +              +   ++   L  V +    + R   G+
Sbjct: 119 QPVLGDGGPVTLPPDTTVQFAKDGTINAISADNRTPPVSLGRLKLVSIDPSNLDRGTDGL 178

Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                         V +  G LE SN +    +  MI ++++       +   + +   A
Sbjct: 179 FRQRDGQDANVDERVRITGGALEGSNVSLTDSLVNMIEISRQLELQMKALHTGDTNAQSA 238

Query: 238 IRNI 241
              +
Sbjct: 239 -NEL 241


>gi|315649858|ref|ZP_07902941.1| fagellar hook-basal body protein [Paenibacillus vortex V453]
 gi|315274832|gb|EFU38213.1| fagellar hook-basal body protein [Paenibacillus vortex V453]
          Length = 274

 Score =  138 bits (347), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 58/267 (21%), Positives = 111/267 (41%), Gaps = 32/267 (11%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--------- 51
           M  S    + +  AL+QRL  +ADNM+N +T G++  +  F +V+  ++           
Sbjct: 1   MNNSMISAMVSMNALQQRLDVIADNMANVNTAGYKKKEASFDDVLTQVQGHHKDFDRTGR 60

Query: 52  ----IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107
                      +       + E G+   TG   D  ++G A FA++    I  TR+G F 
Sbjct: 61  STPLGYTLGYGMRLSSVVQNMEQGAMKETGNPFDLMIDGQAMFAVQGDGAIGYTREGGFH 120

Query: 108 -----VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG----EISQKGKVIATM 158
                   +  L++ S  YPVLD+ + PI  P K ++    +        +    ++AT+
Sbjct: 121 VTPDARNPNNLLLANSQGYPVLDVNNNPISFPSKGKVAVNEKGQIILETFAGVRSIVATL 180

Query: 159 GLYSVDMSQGFVRRENS----------GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMY 208
            +  ++  +G V   ++          G   ++ P    +    +V  GF+E SN N   
Sbjct: 181 KVVELERPEGLVAVGDNLFVVGEGLTEGDVFDLTPPAPGEPPKSSVLSGFVEQSNVNLTD 240

Query: 209 EMGQMIHLTQKFNSITTLIDENEKSML 235
           EM +M+ + + +  +   +  ++  M 
Sbjct: 241 EMTKMMEVQRAYQLMARALSSSDTMMN 267


>gi|239817164|ref|YP_002946074.1| flagellar basal body rod protein FlgF [Variovorax paradoxus S110]
 gi|239803741|gb|ACS20808.1| flagellar basal-body rod protein FlgF [Variovorax paradoxus S110]
          Length = 248

 Score =  138 bits (347), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 58/248 (23%), Positives = 91/248 (36%), Gaps = 8/248 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + ++      ++ ++VA+NM+N  T GFR     F  V      +   +   VA
Sbjct: 1   MDRMLYVAMSGAKQAMEQQASVANNMANASTPGFRAQINSFRAVPVTDGAEATTRAYVVA 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G    TG  LD A+ GD W A+++P  G   TR G  +V  +G  ++  G
Sbjct: 61  T-TPGADFSHGPLTETGRALDVAIHGDGWLAVQTPDGGEAYTRVGNLQVNAEG-QLTTMG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV---IATMGLYSVDMS--QGFVRREN 174
             PV   A      P                 G     IA +G   +        VR  +
Sbjct: 119 SLPVAGDAGALTVPPGSTVAIAANGLVTARGAGDPAIGIAEVGRLKLVNPPVADLVRGAD 178

Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
                     P E  + VTV  G +E SN N +  M  MI   + F      +   +++ 
Sbjct: 179 GLFRMREGLAPAEPDAAVTVTTGAVEGSNVNGVEAMVAMIANARSFEMQMKSMHSADENA 238

Query: 235 LEAIRNIA 242
             A + +A
Sbjct: 239 QSANKLLA 246


>gi|163733143|ref|ZP_02140587.1| flagellar basal-body rod protein FlgG [Roseobacter litoralis Och
           149]
 gi|161393678|gb|EDQ18003.1| flagellar basal-body rod protein FlgG [Roseobacter litoralis Och
           149]
          Length = 246

 Score =  138 bits (347), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 94/244 (38%), Gaps = 21/244 (8%)

Query: 17  QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID--------------QKISFVASG 62
            R+ T+++N+SN  T G+   + +F+++     +                 Q    V   
Sbjct: 1   MRVETISNNLSNMSTTGYNARRAEFADLHYQQMSRPGTVNATDGTVLPTGVQLGLGVRPS 60

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLVSASGKY 121
              +  + GS  +TG +LD A+EG  +  +  P G    TRDG  K   +G +V++ G  
Sbjct: 61  AVSVQLQQGSLAATGGDLDLAIEGIGFLEVTLPSGQAAYTRDGGLKRDAEGLIVTSDGYP 120

Query: 122 PVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
              ++      +    +    V      +   +++    +     ++G      +  +  
Sbjct: 121 VEPEIVIPDDARSISINTSGEVFAYFSDATDAELLGQFNMAGFTNAKGLEALGGNLFAET 180

Query: 181 IPPTP-----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
                       +    TV++G+LE S+ +++ E+ ++I   + +     +I   ++ M 
Sbjct: 181 EASGAAIVSTPGEDGLGTVRQGYLESSSVDAVREITELIEAQRGYEMNAKVISAADQMMG 240

Query: 236 EAIR 239
              +
Sbjct: 241 ATTQ 244


>gi|329928721|ref|ZP_08282570.1| putative flagellar basal-body rod protein FlgB [Paenibacillus sp.
           HGF5]
 gi|328937502|gb|EGG33920.1| putative flagellar basal-body rod protein FlgB [Paenibacillus sp.
           HGF5]
          Length = 275

 Score =  138 bits (346), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 54/279 (19%), Positives = 100/279 (35%), Gaps = 42/279 (15%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--------- 51
           M  S    + +  AL+QRL  +ADNM+N +T G++  +  F +V+  ++           
Sbjct: 1   MNNSMISAMVSMNALQQRLDVIADNMANVNTAGYKKKEASFEDVLTQVQGHHKDFDRTGR 60

Query: 52  ----IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107
                      +       + E G+   TG  LD  ++G A FA++    I  TR+G F 
Sbjct: 61  ATPLGYTLGYGMRLSSVVPNMEQGAMKETGNPLDLMIDGQAMFAVQGDGAIGYTREGGFH 120

Query: 108 VTD-------------DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEIS----- 149
           V+               G  V      P+   A   + I +  +I      G  +     
Sbjct: 121 VSPDARNPNNLLLVNSQGYPVLDVNDNPISLPAKGKVAINESGQIIVETPTGGRTAPYAT 180

Query: 150 ------QKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSN 203
                 ++ + +  +G     +  G    +    +P  P  P        V  GF+E SN
Sbjct: 181 LKLVELERPEGLVAVGDNLFVLGNGLAEGDVFDTTPPAPGEP----PKSKVLSGFVEQSN 236

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            N   E+ +M+ + + +      +  ++  M      + 
Sbjct: 237 VNLTDELTKMMEVQRAYQLTARALSSSDTMM-NLANTMR 274


>gi|169826608|ref|YP_001696766.1| flagellar hook-basal body complex protein [Lysinibacillus
           sphaericus C3-41]
 gi|168991096|gb|ACA38636.1| Flagellar hook-basal body complex protein [Lysinibacillus
           sphaericus C3-41]
          Length = 280

 Score =  138 bits (346), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 53/276 (19%), Positives = 104/276 (37%), Gaps = 39/276 (14%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVV-------------- 45
             F       +  ++R   +++N++N +T GF+  +     F +++              
Sbjct: 6   KGFYTVATGMITQQRRTELLSNNLANANTPGFKADQSTIRSFPDMLMSSIGKTNAPANQQ 65

Query: 46  --GAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFAL------------EGDAWFA 91
                 + +    +     +   +   G   ST    D AL             G  +F 
Sbjct: 66  AGAEYMSQVGALNTGTYLQETLPNYIQGQIYSTDFTTDMALIDGNLPQNEDGVTGSIFFR 125

Query: 92  LESPRG-IILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ 150
           L  P G    TR+G F +   G LV+  G Y + D      +I   ++ F + E G I  
Sbjct: 126 LAHPDGGEAYTRNGNFTLDGQGYLVNGQGLYVLNDAGQ---RIQLPNDDFRLDESGAIYV 182

Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISP----NIPPTPLEDLSGVTVKRGFLEDSNANS 206
             + +A +G+          +++N  I      N+P     +    T+++ FLE SN +S
Sbjct: 183 NNQQVARVGVSYAANPNMLQKQDNGLIRTENGANLPSAYGTNGVSFTLRQNFLEGSNVDS 242

Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
              M  ++   + F +   ++   ++SM +A+  I 
Sbjct: 243 GRAMTDLMTAYRAFEANQKVLQAYDRSMEKAVNEIG 278


>gi|296534159|ref|ZP_06896653.1| flagellar basal-body rod protein FlgF [Roseomonas cervicalis ATCC
           49957]
 gi|296265514|gb|EFH11645.1| flagellar basal-body rod protein FlgF [Roseomonas cervicalis ATCC
           49957]
          Length = 248

 Score =  138 bits (346), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 50/245 (20%), Positives = 107/245 (43%), Gaps = 6/245 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV----VGAIKNDIDQKI 56
           M     + L+   A ++  + +A N++N DT G+++ ++ F       +G       +++
Sbjct: 1   MDMPGYVVLSRLAAQQRATAALAMNIANADTPGYKSAQMVFGAHIDRQLGVDAPRGGREV 60

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVS 116
           +F      +     GS  +TG  LD AL G+ +FA+++  G   TR GRF ++ +G +V 
Sbjct: 61  AFSQDRATWRDFTPGSLQATGNPLDLALGGEGFFAVQTGNGERYTRAGRFALSPEGGIVD 120

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
             G  PVL+    P+ +P   +  ++   G +  +   +  + + +    Q  + +    
Sbjct: 121 -IGGNPVLNEDGAPLVLPPNAQRIDITGDGTVRTEQGPVGRLRVVNFADPQKLIAQGERL 179

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                   P + +    V +G +E SN  S+ E+ ++    ++F   +  ++        
Sbjct: 180 FEAPAE-LPAQPVDAPRVVQGSVEGSNVQSIVELTRLTAEMREFQFASQFVETEGDRAKT 238

Query: 237 AIRNI 241
           A+  I
Sbjct: 239 AVERI 243


>gi|116694220|ref|YP_728431.1| flagellar basal body rod protein FlgF [Ralstonia eutropha H16]
 gi|113528719|emb|CAJ95066.1| flagellar basal body rod protein [Ralstonia eutropha H16]
          Length = 247

 Score =  138 bits (346), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 53/246 (21%), Positives = 88/246 (35%), Gaps = 8/246 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       L+    +  + + V++N++N  T  FR     +  V   +        +F  
Sbjct: 1   MDRMIYTALSGAKQILDQQAAVSNNLANVSTPAFRAQVNLYRAV--PVVGPEAGTRAFTV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G    TG  LD AL+G+ W  +++P      TR G  +V  DG + + SG
Sbjct: 59  ASTPGADMRAGPLTYTGRTLDVALQGNGWLVVQAPDGTEAYTRAGALQVAQDGQVQTISG 118

Query: 120 KYPVLDMAS---VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
              + D       P           +  +G       +     L  V+     + R + G
Sbjct: 119 LPVMGDGGPLAVPPGSQVTIGTDGTITARGPGEASAGLAQVGRLRVVNPPNDAIARGDDG 178

Query: 177 ISPNIPP-TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
           +    P   PLE    V V  G LE SN N    M +MI   ++F     +I   + +  
Sbjct: 179 LFRLRPGAQPLEADPTVRVISGALEGSNVNPTEAMVEMIANARRFEMQMKMIQGADGNEQ 238

Query: 236 EAIRNI 241
            A   +
Sbjct: 239 RA-NQL 243


>gi|300693339|ref|YP_003749312.1| flagellar component of cell-proximal portion of basal-body rod
           [Ralstonia solanacearum PSI07]
 gi|299075376|emb|CBJ34671.1| flagellar component of cell-proximal portion of basal-body rod
           [Ralstonia solanacearum PSI07]
          Length = 245

 Score =  138 bits (346), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 49/244 (20%), Positives = 93/244 (38%), Gaps = 6/244 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + +     L  + +  A+N++N+ T GF+     F  V   ++ D     SFV 
Sbjct: 1   MDRMIYVAMTGAKHLFDQQAASANNLANSSTTGFKAQIDAFHTV--GVQGDGSPTRSFVM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119
           +         G   +TG  LD A++G  +FA+++  G    TR G F+V  DG++ + SG
Sbjct: 59  ASAIGTDMTPGPIETTGRSLDVAIDGQGFFAVQTADGGEAYTRAGAFQVGADGTIQTLSG 118

Query: 120 KYPVLDMASV--PIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177
           +  + D   V  P     +              +   ++   L  V++    + R   G+
Sbjct: 119 QPVLGDGGPVTLPPDTTVQFAKDGTINAISADNRTPPVSLGRLKLVNIDPSNLDRGTDGL 178

Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                         V +  G LE SN +    +  MI ++++       +   + +   A
Sbjct: 179 FRQRDGQDANVDERVRITGGALEGSNVSLTDSLVNMIEISRQLELQMKALHTGDTNAQSA 238

Query: 238 IRNI 241
              +
Sbjct: 239 -NEL 241


>gi|311033283|ref|ZP_07711373.1| flagellar basal-body rod protein [Bacillus sp. m3-13]
          Length = 273

 Score =  138 bits (346), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 47/273 (17%), Positives = 95/273 (34%), Gaps = 34/273 (12%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIK---VKFSEVVGA---------- 47
           M   F    A  ++ ++R+  +++N+SN +T G++  +     F +++            
Sbjct: 1   MLRGFYTATAGMISQQRRMEMMSNNLSNANTPGYKADQGSLRSFPDMLLQRMEQASGTNT 60

Query: 48  -----IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGD--------AWFALES 94
                  ND  +  + V   +       G    TG + D A+            +   + 
Sbjct: 61  FSPMSNPNDPVRLSTGVYLQETKPKHTQGDLRPTGNDTDLAILNQNLPENASVYFTVEQV 120

Query: 95  PRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV 154
                 TR+G F +  +G L + SG Y + +  +   +I  +     V + G I +    
Sbjct: 121 DGTPRYTRNGNFSIDPEGYLTTNSGLYVLDENDN---RIQIRSRSMFVQQDGTILEGDIR 177

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIP-----PTPLEDLSGVTVKRGFLEDSNANSMYE 209
              +G+   +     VR  N                       ++ +G +E SN ++   
Sbjct: 178 NTRLGIALANNPDELVREGNGLYRTAENVPLLQNAAGAPGVNYSISQGHIERSNVDTAQA 237

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           M  M    + F +   +I   + SM +A   I 
Sbjct: 238 MSDMTAAYRAFEANQKVIQAYDMSMQKAANEIG 270


>gi|188592118|ref|YP_001796716.1| flagellar basal body rod protein flgf [Cupriavidus taiwanensis LMG
           19424]
 gi|170938492|emb|CAP63479.1| Flagellar basal-body rod protein flgF [Cupriavidus taiwanensis LMG
           19424]
          Length = 247

 Score =  138 bits (346), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 53/246 (21%), Positives = 88/246 (35%), Gaps = 8/246 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       L+    +  + + V++N++N  T  FR     +  V   +        +F  
Sbjct: 1   MDRMIYTALSGAKQILDQQAAVSNNLANVSTPAFRAQVNLYRAV--PVVGPEAGTRAFTL 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G    TG  LD AL+G+ W  +++P      TR G  +V  DG + + SG
Sbjct: 59  ASTPGADMRAGPLTYTGRALDVALQGNGWLVVQAPDGSEAYTRAGALQVAQDGQVQTISG 118

Query: 120 KYPVLDMAS---VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
              + D       P           +  +G       +     L  V+     + R + G
Sbjct: 119 LPVMGDGGPLAVPPGSQVTIGTDGTITARGPGEASAGLAQVGRLRVVNPPNDAIARSDDG 178

Query: 177 ISPNIPP-TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
           +    P   PLE    V V  G LE SN N    M +MI   ++F     +I   + +  
Sbjct: 179 LFRLRPGAQPLEADPTVRVISGALEGSNVNPTEAMVEMIANARRFEMQMKMIQGADGNEQ 238

Query: 236 EAIRNI 241
            A   +
Sbjct: 239 RA-NQL 243


>gi|294013086|ref|YP_003546546.1| flagellar hook protein FlgE [Sphingobium japonicum UT26S]
 gi|292676416|dbj|BAI97934.1| flagellar hook protein FlgE [Sphingobium japonicum UT26S]
          Length = 280

 Score =  138 bits (346), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 47/276 (17%), Positives = 93/276 (33%), Gaps = 40/276 (14%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--ISFVAS 61
           SF I L+   A +  LST A+N++N ++  F+  K  F ++  A       +     V +
Sbjct: 2   SFYISLSGLKAAQTDLSTTANNVANVNSTAFKKSKAVFGDIFAAAPMQTTTQVAGQGVRT 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRFKVTDDGSLVSASG 119
                    G+  +T   LD A+ G+ +F ++      I  TR+G F V +D  +V  +G
Sbjct: 62  QGISQQFTQGTIETTDKTLDLAITGEGFFTVKRSADDQIGYTRNGAFSVEEDRYVVDTTG 121

Query: 120 KYPV------------------------------LDMASVPIQIPQKDEIFNVGEKGEIS 149
                                                     Q+            G  +
Sbjct: 122 ARLQVIPLDPTTGAPTVTGTLTPASLTDLKIPTNWPDGGTGNQLTSVGVSEEGKITGVYA 181

Query: 150 QKGKV-IATMGLYSVDMSQGFVRRENSGI-SPNIPPTPL----EDLSGVTVKRGFLEDSN 203
               V +    + + +  +G  +  ++   + N    P+          +++ G LE SN
Sbjct: 182 DGSTVYLGATAIAAFNSQEGLRQSGDAHWTATNASGAPMLGTGNSGLFGSIRSGALERSN 241

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +   E+  +I   + F + +  I+         + 
Sbjct: 242 VDITEELVNLISAQRNFQANSKAIEAANTLSTTIVN 277


>gi|34558103|ref|NP_907918.1| flagellar basal-body rod protein FlgG [Wolinella succinogenes DSM
           1740]
 gi|34483821|emb|CAE10818.1| FLAGELLAR BASAL-BODY ROD PROTEIN FLGG [Wolinella succinogenes]
          Length = 277

 Score =  138 bits (346), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 46/274 (16%), Positives = 100/274 (36%), Gaps = 32/274 (11%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDIDQKIS 57
           MQ+ +       +    RL  +++N++N +T GF+   V    F  +    K  +  +  
Sbjct: 1   MQSGYYSSTGGIVTQFHRLDMISNNLANANTTGFKRDDVVIGDFLRLYEQQKEPLPLEDQ 60

Query: 58  FVASGKEYLSKEVGSFISTGTELDFALEG---------------DAWFALESPRGIILTR 102
              + K                 D ++ G               +A+F +E+P GI  TR
Sbjct: 61  TREAAKFLNRAMDRVPSIVEEYTDRSIGGITPSENRFDFALQSENAYFMIETPEGIRYTR 120

Query: 103 DGRFKVTDDGSLVSASGKYPVLDMA-----------SVPIQIPQKDEIFNVGEKGEISQK 151
           DG F +  +G LV+  G   +                V I+  +   +++     +    
Sbjct: 121 DGSFTLNSEGRLVTKEGFAVLPREFVQSRQYIDIPDGVVIEADRNGNLYSRTLNNDELGD 180

Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED--LSGVTVKRGFLEDSNANSMYE 209
              +  + + S +  +   +   +            +   +   + +G+LE SN N+++E
Sbjct: 181 IIPLGNIAIASFENPKYLEKTGKNLYEYPQERMGERNLATNSGALVQGYLEKSNVNAVWE 240

Query: 210 MGQMIHLTQKFNSITTLIDEN-EKSMLEAIRNIA 242
           M  +I   +  +  + ++  + +    EAI  +A
Sbjct: 241 MTGLIETNRLVDMYSKVMKTHMDDLNTEAITKLA 274


>gi|134297197|ref|YP_001120932.1| flagellar basal body rod protein FlgF [Burkholderia vietnamiensis
           G4]
 gi|134140354|gb|ABO56097.1| flagellar basal-body rod protein FlgF [Burkholderia vietnamiensis
           G4]
          Length = 252

 Score =  138 bits (346), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 52/249 (20%), Positives = 91/249 (36%), Gaps = 9/249 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----DIDQKI 56
           M       +        + + VA+N++NT T GFR     +  V     +    D     
Sbjct: 1   MDRLIYTAMTGASQSLDQQAIVANNLANTSTTGFRAQLANYRAVPMNFGDGSTIDPTTTR 60

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLV 115
           ++V +         G    TG  LD A++G  W ++++  G    TR G   V ++G LV
Sbjct: 61  TYVLASTPGADYAPGPITRTGNPLDVAVQGAGWLSVQTADGGEAYTRAGNLHVDENGQLV 120

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEK---GEISQKGKVIATMGLYSVDMSQGFVRR 172
           +AS    + +   + +    +  I   G             V     +  V+     + R
Sbjct: 121 NASNLPVIGNGGPISVPPNAEVTIGKDGTVSALMPGDPPTAVAMVDQMKLVNPDPTTLTR 180

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            N G+       P +    V V    LE SN N +  M  MI   + F   + LI   ++
Sbjct: 181 GNDGLFRTADGNPADADPNVVVTPNSLEGSNVNPVTAMVAMIDNARAFQLQSKLIQTADQ 240

Query: 233 SMLEAIRNI 241
           +  ++   +
Sbjct: 241 N-EQSANQL 248


>gi|307293787|ref|ZP_07573631.1| fagellar hook-basal body protein [Sphingobium chlorophenolicum L-1]
 gi|306879938|gb|EFN11155.1| fagellar hook-basal body protein [Sphingobium chlorophenolicum L-1]
          Length = 280

 Score =  138 bits (346), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 48/276 (17%), Positives = 93/276 (33%), Gaps = 40/276 (14%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--ISFVAS 61
           SF I L+   A +  LST A+N++N ++  F+  K  F ++  A       +     V +
Sbjct: 2   SFYISLSGLKAAQTDLSTTANNVANVNSTAFKKSKAVFGDIFAAAPMQTTTQVAGQGVRT 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRFKVTDDGSLVSASG 119
                    G+  +T   LD A+ G+ +F ++      I  TR+G F V +D  +V  +G
Sbjct: 62  QGISQQFTQGTIETTDKTLDLAITGEGFFTVKRSADDQIGYTRNGAFSVEEDRYVVDTTG 121

Query: 120 KYPV------------------------------LDMASVPIQIPQKDEIFNVGEKGEIS 149
                                                     Q+            G  +
Sbjct: 122 ARLQVVPLDPTTGVPTATGTLTPASLTDLKIPTNWPDGGTGNQLTSVGVSEEGKITGVYA 181

Query: 150 QKGKV-IATMGLYSVDMSQGFVRRENSGI-SPNIPPTPL----EDLSGVTVKRGFLEDSN 203
               V +    + + +  +G  +  ++   + N    P+          +V+ G LE SN
Sbjct: 182 DGSTVYLGATAIAAFNSQEGLRQSGDAHWTATNASGAPMLGTGNSGLFGSVRSGALERSN 241

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +   E+  +I   + F + +  I+         + 
Sbjct: 242 VDITEELVNLISAQRNFQANSKAIEAANTLSTTIVN 277


>gi|299068733|emb|CBJ39972.1| flagellar component of cell-proximal portion of basal-body rod
           [Ralstonia solanacearum CMR15]
          Length = 245

 Score =  137 bits (345), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 50/244 (20%), Positives = 92/244 (37%), Gaps = 6/244 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + +     L  + +  A+N++N+ T GF+     F  V   ++ D     SFV 
Sbjct: 1   MDRMIYVAMTGAKHLFDQQAASANNLANSSTTGFKAQIDAFHTV--GVQGDGSPTRSFVM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119
           +         G   +TG  LD A++G  +FA+++  G    TR G F+V  DG++ + SG
Sbjct: 59  ASAIGTDMTPGPIETTGRSLDVAIDGQGFFAVQTADGGEAYTRAGAFQVGADGTIQTLSG 118

Query: 120 KYPVLDMASV--PIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177
           +  + D   V  P     +              +   ++   L  V +    V R   G+
Sbjct: 119 QPVLGDGGPVTLPPDTTVQFAKDGTINAISADNRTPPVSLGRLKLVSIDPANVDRGTDGL 178

Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                         V +  G LE SN +    +  MI ++++       +   + +   A
Sbjct: 179 FRQRDGQDANVDERVRITGGALEGSNVSLTDSLVNMIEISRQLELQMKALHTGDTNAQSA 238

Query: 238 IRNI 241
              +
Sbjct: 239 -NEL 241


>gi|254446126|ref|ZP_05059602.1| conserved domain protein [Verrucomicrobiae bacterium DG1235]
 gi|198260434|gb|EDY84742.1| conserved domain protein [Verrucomicrobiae bacterium DG1235]
          Length = 250

 Score =  137 bits (345), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 63/249 (25%), Positives = 110/249 (44%), Gaps = 8/249 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV------VGAIKNDIDQ 54
           M        AA   LE   +++A N++ + T G++   + F  V      +     +  Q
Sbjct: 1   MLNGVYQNAAAMTGLENWNNSIAQNIAQSSTPGYKKAMLSFEGVEAGSVGIKNSFGNTLQ 60

Query: 55  KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGS 113
             S    G   +    GS ++T  E DFALEGD +F L +  G  + TRDG+FK+ D G 
Sbjct: 61  HASIQTKGVGAVDFSSGSIVTTNGEFDFALEGDGFFELRADDGQLVYTRDGQFKMNDQGE 120

Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRE 173
           LVS  G + + D  ++   I            G + Q G+ +A M +  V+  +  +R  
Sbjct: 121 LVSKQGFHVMSDTRNIIQLI-PDGGRLQAANDGTLRQGGQKVAEMSIRGVENPEYMIRSN 179

Query: 174 NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
              I           +    V+ G LE SN ++  EM  +I++++ F     +I +++  
Sbjct: 180 GGFILGPNNEEAARHIEAPFVRHGSLEQSNVSATTEMINLINVSRSFQINQRVIQQHDDV 239

Query: 234 MLEAIRNIA 242
           + +AI+ + 
Sbjct: 240 LGKAIQTLG 248


>gi|56965598|ref|YP_177332.1| flagellar basal-body rod protein [Bacillus clausii KSM-K16]
 gi|56911844|dbj|BAD66371.1| flagellar basal-body rod protein [Bacillus clausii KSM-K16]
          Length = 265

 Score =  137 bits (345), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 48/265 (18%), Positives = 96/265 (36%), Gaps = 26/265 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKN------- 50
           M        +  LA +     +A+N++N  T G++  +     F   +   ++       
Sbjct: 1   MLKGLYTATSGMLAAQYHQDMLANNLANAQTPGYKAEQSVSRAFPTFLMEAQSVSKAGTV 60

Query: 51  ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFAL-------EGDAWFALESPRGIIL 100
               +    + V   ++  +   G    TG   D AL           +FA+ +  GI  
Sbjct: 61  QKQGLGSLATAVYLQEQQTNARQGDIQETGNTTDLALLQTGLEENNAVFFAVMTENGIRY 120

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           TR+G  +V   G L +A G             I    E F+V E G +   G+   T+ +
Sbjct: 121 TRNGDLQVDSQGRLATAGGHLLQSTEGGP---IQVDSEAFSVDESGAVVVAGENRGTIEI 177

Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGV---TVKRGFLEDSNANSMYEMGQMIHLT 217
              D +    R  +          P    +     ++++  +E SN ++   M  M+   
Sbjct: 178 VLADDTNELEREGDGLYMLENGELPSAHGNPDIDFSIRQAAIERSNVDTAASMNAMLSAY 237

Query: 218 QKFNSITTLIDENEKSMLEAIRNIA 242
           + F +   ++   ++SM +A+  + 
Sbjct: 238 RLFEANQKVVQAYDQSMDKAVNEVG 262


>gi|58426791|gb|AAW75828.1| flagellar protein [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 280

 Score =  137 bits (345), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 57/245 (23%), Positives = 97/245 (39%), Gaps = 10/245 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  + +    A  Q  STV+ N++N DTVGF+            I+           
Sbjct: 30  MDKALYVAMTGARASLQAQSTVSHNLANVDTVGFKAALANTEAF--KIQGKGYPSRIDAL 87

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
              +   +  G    TG  LD +L+ D W A++SP      TR+G   +T +G LV+A+G
Sbjct: 88  HVDQGFDRSQGHQKVTGNPLDVSLQQDRWLAVQSPDGSEAYTRNGELALTANGQLVTANG 147

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG----LYSVDMSQGFVRRENS 175
              + +  +     P +           I  +G+   TM     +  VD     + R   
Sbjct: 148 HAVLDEGGNPMTIPPHQAMEIGSDGSISIIPQGEGPQTMAIVGKMKVVDAPADRLTRRPD 207

Query: 176 GISPNIPPTPLEDLSGVT---VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
           G+  N    P +  +  T   +  G LE SN ++   + +MI L ++F     +I   + 
Sbjct: 208 GLMRNTSTDPAQAFTVATGKTINSGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNGDD 267

Query: 233 SMLEA 237
           +   A
Sbjct: 268 NAQSA 272


>gi|284041496|ref|YP_003391836.1| flagellar hook-basal body protein [Conexibacter woesei DSM 14684]
 gi|283945717|gb|ADB48461.1| flagellar hook-basal body protein [Conexibacter woesei DSM 14684]
          Length = 245

 Score =  137 bits (345), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 52/246 (21%), Positives = 102/246 (41%), Gaps = 8/246 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID----QKI 56
           M        A   A +QR+  V+++++N  T G++ ++V F +++   + D         
Sbjct: 1   MLQGLYSAAAGMAAQQQRIDGVSNDLANISTPGYKGVRVGFRDLLYNSQGDQAGETVTAG 60

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLV 115
           +  A+     S++ G+ ++T   LD ++EG  +F L    G I LTRDG F++   G + 
Sbjct: 61  AGSAASFIGRSQQQGAVLTTDQPLDVSIEGSGFFQLRRADGGIALTRDGSFRLDPLGRVT 120

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
           S+ G      +          D I    +       G+ I  + L +V    G     ++
Sbjct: 121 SSDGLLLSPPVTVPRNT--PIDRIAIGADGTVRVNDGQQIGRIQLVTVTSPDGLRALGDN 178

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
             +           +G T+++G LE SN +    M  M++  + F   +  I   ++ + 
Sbjct: 179 RFAVTPESGAATATNGATLRQGTLEGSNVDMSDAMVDMMNAQRAFQLASRAIHMQDQML- 237

Query: 236 EAIRNI 241
           E    +
Sbjct: 238 EVANQV 243


>gi|299066527|emb|CBJ37717.1| Putative flagellar component of cell-proximal portion of basal-body
           rod (flgF) [Ralstonia solanacearum CMR15]
          Length = 254

 Score =  137 bits (345), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 61/252 (24%), Positives = 103/252 (40%), Gaps = 11/252 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDIDQKIS 57
           MQ  F + L++      RL  VA N++N  T G++   V    FS VV A+      +  
Sbjct: 1   MQEIFAVTLSSMHQDMARLDGVALNLANVSTPGYKRGVVAVQPFSSVVDAVAGQAGARAE 60

Query: 58  FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSA 117
            +   +       G+   TG  +D AL GD +F + +P G   TR G F+    G LV+A
Sbjct: 61  DMNGVQVMSDMRPGTVKLTGEPMDVALAGDGFFEVTTPSGPAYTRQGNFRTDAMGRLVTA 120

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK-------VIATMGLYSVDMSQGFV 170
            G   +     + +                 +  G         IA + +   D  +   
Sbjct: 121 QGYPVMGKNGEIFLTTQTPVVDAAGNVTEPNATTGPSAISPRTPIAQIKVVKFDTPKTLQ 180

Query: 171 RRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
           R    G+  +     + D + V +++G LE+ N +SM EM Q+I   + F S+  +    
Sbjct: 181 R-LGEGLMASGTGMTVVDDANVQIRQGALENGNVSSMQEMMQLIQTMRHFESVQKVTQGY 239

Query: 231 EKSMLEAIRNIA 242
           ++ +  AIR + 
Sbjct: 240 DEMIGTAIRKLG 251


>gi|17548567|ref|NP_521907.1| flagellar basal-body rod protein FlgF [Ralstonia solanacearum
           GMI1000]
 gi|17430815|emb|CAD17497.1| probable flagellar basal-body rod protein flgf [Ralstonia
           solanacearum GMI1000]
          Length = 245

 Score =  137 bits (345), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 50/244 (20%), Positives = 92/244 (37%), Gaps = 6/244 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + +     L  + +  A+N++N+ T GF+     F  V   ++ D     SFV 
Sbjct: 1   MDRMIYVAMTGAKHLFDQQAASANNLANSSTTGFKAQIDAFHTV--GVQGDGSPTRSFVM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119
           +         G   +TG  LD A++G  +FA+++  G    TR G F+V  DG++ + SG
Sbjct: 59  ASAIGTDMTPGPIETTGRSLDVAIDGQGFFAVQTADGGEAYTRAGAFQVGADGTIQTLSG 118

Query: 120 KYPVLDMASV--PIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177
           +  + D   V  P     +              +   ++   L  V +    V R   G+
Sbjct: 119 QPVLGDGGPVTLPPDTTVQFAKDGTINAISADNRTPPVSLGRLKLVSIDPSNVDRGTDGL 178

Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                         V +  G LE SN +    +  MI ++++       +   + +   A
Sbjct: 179 FRQRDGQDANVDERVRITGGALEGSNVSLTDSLVNMIEISRQLELQMKALHTGDTNAQSA 238

Query: 238 IRNI 241
              +
Sbjct: 239 -NEL 241


>gi|56460251|ref|YP_155532.1| flagella basal body rod protein [Idiomarina loihiensis L2TR]
 gi|56179261|gb|AAV81983.1| Flagella basal body rod protein [Idiomarina loihiensis L2TR]
          Length = 247

 Score =  137 bits (345), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 95/241 (39%), Gaps = 7/241 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + ++        ++  A+N++N +T  F+    +   +      +      F  
Sbjct: 1   MDKMLWVAMSGAKENMNAVAVRANNLANANTTAFKGDLQQARAM--QAFGEGLPTRVFSM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +     +   G+  +TG  +D A++   W A++        TR+G  +V  DG L +++G
Sbjct: 59  TESPGQNFASGAIQTTGRNMDVAIKDQGWIAVDDGSGNERYTRNGSLEVGTDGLLKNSTG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS----VDMSQGFVRRENS 175
           +  + +   + + +P  + +        I   G     M +      V+   G + + N 
Sbjct: 119 QTVLGNNGPIFVPMPIDNLVIGANGNVSIRPMGAPANAMEVIDRIKLVNPPNGNMEKGND 178

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
           G+            + V ++ G LE SN NS+ EM  MI L +++     L+   +++  
Sbjct: 179 GLFKLKDDQQAFADANVKLQIGALEGSNVNSVEEMTHMIALQRQYEMNVKLMKTADENAQ 238

Query: 236 E 236
            
Sbjct: 239 R 239


>gi|51894143|ref|YP_076834.1| flagellar basal body and hook proteins [Symbiobacterium
           thermophilum IAM 14863]
 gi|51857832|dbj|BAD41990.1| flagellar basal body and hook proteins [Symbiobacterium
           thermophilum IAM 14863]
          Length = 231

 Score =  137 bits (344), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 47/254 (18%), Positives = 85/254 (33%), Gaps = 37/254 (14%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51
           M        +     + R   +ADN++N +T GF+       +F  ++     D      
Sbjct: 1   MIRGIEASRSGMAVEQLRTDVLADNIANMNTSGFKRATATSVEFDRMLIHRMGDPTDPRS 60

Query: 52  --IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKV 108
             +    +     +  + +  G    TG  LD ALEG  WF  + P G +  TR+G F+ 
Sbjct: 61  QEVGTLGNGSRVDQVVVDERQGDIYETGRALDLALEGPGWFLAQRPDGSLYRTRNGAFRQ 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
             DG++ +A G   +++     + +            G I   G  I  + L        
Sbjct: 121 MADGTITTAEGYRVLMEAPGGLVPLVVPGVEPTFQADGTILADGMPIGRLALADAAPETR 180

Query: 169 FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228
              R                          LE SN +   EM  +I   + +      + 
Sbjct: 181 LHSRR-------------------------LEASNVDLAKEMTDLIVTLRAYQVNQRALR 215

Query: 229 ENEKSMLEAIRNIA 242
             ++++  A+  I 
Sbjct: 216 VQDETLARAVTEIG 229


>gi|224417700|ref|ZP_03655706.1| flagellar basal-body rod protein FlgG [Helicobacter canadensis MIT
           98-5491]
 gi|253827049|ref|ZP_04869934.1| flagellar distal rod protein FlgF [Helicobacter canadensis MIT
           98-5491]
 gi|313141243|ref|ZP_07803436.1| flagellar basal-body rod protein flgg [Helicobacter canadensis MIT
           98-5491]
 gi|253510455|gb|EES89114.1| flagellar distal rod protein FlgF [Helicobacter canadensis MIT
           98-5491]
 gi|313130274|gb|EFR47891.1| flagellar basal-body rod protein flgg [Helicobacter canadensis MIT
           98-5491]
          Length = 277

 Score =  137 bits (344), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 57/275 (20%), Positives = 108/275 (39%), Gaps = 32/275 (11%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDID---- 53
           MQ  +   +   +    RL  +A+N++N +T GF+   V    F  +    K  +     
Sbjct: 1   MQGGYYSSVGGMVTQINRLDVIANNIANANTTGFKRDDVVIGDFMRLYEQHKEFLPIKDQ 60

Query: 54  ----------QKISFVASGKEYLSKEVGSFISTGTELDFAL-EGDAWFALESPRGIILTR 102
                              +E+  + VG    T    DFAL   +A+F +E+P GI  TR
Sbjct: 61  TKDAAKFYNRSLNRVPQIVEEFTDRSVGGITQTDNTFDFALSRENAYFMIETPEGIRFTR 120

Query: 103 DGRFKVTDDGSLVSASGKYPVLDMA-----------SVPIQIPQKDEIFNVGEKGEISQK 151
           DG F +  +G LV+  G   +                  I++ +   ++N     E   +
Sbjct: 121 DGSFVLNQEGRLVNKEGYAVLPREYIESPQYIEIIDGFQIEVDKDGNLYNRSLNNEELNE 180

Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL--SGVTVKRGFLEDSNANSMYE 209
             + A + + S +  +   +  ++            ++      V++G+LE SN N +YE
Sbjct: 181 TILTANIAVVSFENPKFLQKIGDNLYKYPNERMNEMEVLERSGAVRQGYLEKSNINVVYE 240

Query: 210 MGQMIHLTQKFNSITTLIDEN-EKSMLEAIRNIAS 243
           M  +I   +   + + ++  + +    EAI  IA+
Sbjct: 241 MTGLIETNRLVEAYSKVLKTHMDDLNTEAITRIAA 275


>gi|312882658|ref|ZP_07742395.1| flagellar basal body rod protein FlgF [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309369619|gb|EFP97134.1| flagellar basal body rod protein FlgF [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 248

 Score =  137 bits (344), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 57/241 (23%), Positives = 98/241 (40%), Gaps = 12/241 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  + ++      Q L   A+N++N  T GFR    +   +      +      F  
Sbjct: 1   MDRALFLAMSGAKQNMQALQLRANNLANVSTTGFRADLEQARSM--QAYGEGLPTRVFSM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASG 119
           + +   +   GS I+TG +LD  +EG  W ++ +      LTR+G  K+  +G L+S  G
Sbjct: 59  TERPGQNFRQGSVITTGRDLDVTIEGLGWISVLDKTGKEGLTRNGNLKIDSNGLLLS--G 116

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172
           +  VL   S PI +P       +G  G IS   +      +  VD        ++   + 
Sbjct: 117 ENLVLGEGSDPITLPIPLSKVEIGSDGTISVVPQGAPADAIEIVDRIKLTNTDNRSLFKD 176

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            N       P    E    V + +G +E SN +++ EM  +I L ++F     L+   E 
Sbjct: 177 INGLFRSKDPNAQYEIDGNVKLLKGAIEGSNVSAIGEMTSLIDLQRQFEMQVKLMSTAED 236

Query: 233 S 233
            
Sbjct: 237 M 237


>gi|242309753|ref|ZP_04808908.1| flagellar basal-body rod protein flgg [Helicobacter pullorum MIT
           98-5489]
 gi|239523754|gb|EEQ63620.1| flagellar basal-body rod protein flgg [Helicobacter pullorum MIT
           98-5489]
          Length = 277

 Score =  137 bits (344), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 55/275 (20%), Positives = 107/275 (38%), Gaps = 32/275 (11%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDID---- 53
           MQ  F   +   +    RL  +A+N++N +T GF+   V    F  +    K  +     
Sbjct: 1   MQGGFYSSVGGMVTQINRLDVIANNIANANTTGFKRDDVVIGDFMRLYEQHKEFLPIEDQ 60

Query: 54  ----------QKISFVASGKEYLSKEVGSFISTGTELDFAL-EGDAWFALESPRGIILTR 102
                              +E+  +  G  + T    DFAL   +A+F +E+P GI  +R
Sbjct: 61  TKDAAKFYNRSLNRVPQIVEEFTDRSAGGVVQTENTFDFALSRENAYFMIETPEGIRFSR 120

Query: 103 DGRFKVTDDGSLVSASGKYPVLDMA-----------SVPIQIPQKDEIFNVGEKGEISQK 151
           DG F + ++G LV+  G   +                  +++     I+N     E   +
Sbjct: 121 DGSFVLNEEGRLVNKEGYAVLPREYIESPQYIDFVDGFQVEVDSDGNIYNRSLTNEELDE 180

Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL--SGVTVKRGFLEDSNANSMYE 209
             +   + + S +  +   +  ++            ++      V++GFLE SN N +YE
Sbjct: 181 ALLGGNIAVVSFENPKFLQKVGDNLYKYPEERMNEMEVLERSGAVRQGFLEKSNINVVYE 240

Query: 210 MGQMIHLTQKFNSITTLIDEN-EKSMLEAIRNIAS 243
           M  +I   +   + + ++  + +    EAI  +A+
Sbjct: 241 MTGLIETNRLVEAYSKVLKTHMDDLNTEAITRLAA 275


>gi|292489132|ref|YP_003532019.1| flagellar basal-body rod protein FlgF [Erwinia amylovora CFBP1430]
 gi|292900251|ref|YP_003539620.1| flagellar basal-body rod protein [Erwinia amylovora ATCC 49946]
 gi|291200099|emb|CBJ47225.1| flagellar basal-body rod protein [Erwinia amylovora ATCC 49946]
 gi|291554566|emb|CBA22179.1| Flagellar basal-body rod protein flgF [Erwinia amylovora CFBP1430]
 gi|312173290|emb|CBX81545.1| Flagellar basal-body rod protein flgF [Erwinia amylovora ATCC
           BAA-2158]
          Length = 245

 Score =  137 bits (344), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 51/245 (20%), Positives = 88/245 (35%), Gaps = 8/245 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    ++A  A   R +  ++NM+N  T GFR     F  V   ++ +     + V 
Sbjct: 1   MDRAIYTAMSAANAALNRQAVTSNNMANAATTGFRAQMAAFRAV--PVEGETIATRALVV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
               Y    +G    TG  LD AL  + W A+  P      TR+G  +V  DG  +S +G
Sbjct: 59  DSTPYHDGTMGPLNHTGRSLDVALPQNGWLAVAMPDGTEAYTRNGAIEVDRDG-ALSVNG 117

Query: 120 KYPVLDM---ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
              + D       P           +   G       V     L   + S   +   + G
Sbjct: 118 YPLMGDGAPLTVPPQSAVTIAPDGTLTALGAGDDPTTVTPVGRLKLANASIQDLLHGDEG 177

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           +        L   + + +    LE SN + +  M +MI   + F+     I   +++  +
Sbjct: 178 LFHPKAGDSLPADAALRLSPETLEGSNVSPVKAMTEMIATARSFDMNMKTIRTADENAKQ 237

Query: 237 AIRNI 241
           A   +
Sbjct: 238 A-NQL 241


>gi|21231396|ref|NP_637313.1| flagellar basal body rod protein FlgF [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66768551|ref|YP_243313.1| flagellar basal body rod protein FlgF [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|21113062|gb|AAM41237.1| flagellar protein [Xanthomonas campestris pv. campestris str. ATCC
           33913]
 gi|66573883|gb|AAY49293.1| flagellar protein [Xanthomonas campestris pv. campestris str. 8004]
          Length = 251

 Score =  137 bits (344), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 58/245 (23%), Positives = 97/245 (39%), Gaps = 10/245 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  + +    A  Q  STV+ N++N DTVGF+            I+           
Sbjct: 1   MDKALYVAMTGARASLQAQSTVSHNLANVDTVGFKAALANTEAF--QIRGKGYPSRIDAL 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
              +   +  G    TG  LD +L+ D W A++SP      TR+G   +T +G LV+A+G
Sbjct: 59  HVDQGFDRSQGHQKVTGNPLDVSLQQDRWLAVQSPDGSEAYTRNGELALTANGQLVTANG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG----LYSVDMSQGFVRRENS 175
              + +  +     P +           I  +G+   TM     +  VD     + R   
Sbjct: 119 HAVLDEGGNPMTIPPHQAMEIGSDGSISIIPQGEGPQTMAIVGKMKVVDAPADRLMRRPD 178

Query: 176 GISPNIPPTPLEDLSGVT---VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
           G+  N    P +  +  T   V  G LE SN ++   + +MI L ++F     +I   + 
Sbjct: 179 GLMRNTSTDPAQAFAVATGKTVNSGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNGDD 238

Query: 233 SMLEA 237
           +   A
Sbjct: 239 NAQSA 243


>gi|171059411|ref|YP_001791760.1| flagellar basal-body rod protein FlgF [Leptothrix cholodnii SP-6]
 gi|170776856|gb|ACB34995.1| flagellar basal-body rod protein FlgF [Leptothrix cholodnii SP-6]
          Length = 241

 Score =  137 bits (344), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 54/242 (22%), Positives = 95/242 (39%), Gaps = 5/242 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + +    A  QR  T+A+N++N  TVGFR     F  V   ++ D     ++  
Sbjct: 1   MDRRIYLSMGGAKATMQRQETLANNLANVSTVGFRAEMQAFRAV--PVRGDGATTRAYAL 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119
                 +   G+  +TG  LD A++G+ W A++S       TR G   V  DG LV ++G
Sbjct: 59  ETTTGYNPAQGNITATGRNLDVAMQGNGWLAVQSLDGTEAYTRAGALNVMPDGLLVGSNG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
              + D   + +    + +I   G     +  G +     L  V       R ++     
Sbjct: 119 LPVLGDGGPITLPANAEVQIAGDGTISARAANGGITPVGKLKLVTPEAPLKRGDDGLFRA 178

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
                P        ++ G LE SN +++  M  MI   ++F      +   E+   +A +
Sbjct: 179 ADGDLP--ADPNARLQDGALEGSNVSAIETMVAMISAARQFEQQMKSMQTTEQDEKQAAQ 236

Query: 240 NI 241
            +
Sbjct: 237 LL 238


>gi|296283227|ref|ZP_06861225.1| flagellar basal-body rod protein FlgF [Citromicrobium bathyomarinum
           JL354]
          Length = 248

 Score =  137 bits (344), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 54/247 (21%), Positives = 101/247 (40%), Gaps = 7/247 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---DIDQKIS 57
           M  S  + L+ + AL +R+  VA+N++NT TVGFR  +  F E V        D  +  S
Sbjct: 1   MDISSYVLLSQEQALRRRMDIVANNLANTSTVGFRREQPMFREYVERADEAIIDDAKPTS 60

Query: 58  FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR--GIILTRDGRFKVTDDGSLV 115
           FV   +      +G+F  TG  LD  ++G  + A+E P   G   TR G   V + G L 
Sbjct: 61  FVLDLRAIHDTSLGAFQPTGNPLDVMIDGPGYLAVELPDGAGTAYTRAGFVSVLETGELA 120

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
           +A G+  + +     +  P++    ++   G +      +  + +   D   G   + + 
Sbjct: 121 TAGGQRLLDEGGQPIVVPPEEVGRVSIAADGSVMGANGALGRLAVTVFDDETGLAPKGDG 180

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
             +       +       ++ G +E SN   + E   MI + + + +   + +       
Sbjct: 181 LYAGAEGR--VLPAEETKLRSGGVEGSNVQPIVETTAMIDILRSYQNSVRMTESLNDMRK 238

Query: 236 EAIRNIA 242
            A+  + 
Sbjct: 239 RALDRLG 245


>gi|307823532|ref|ZP_07653761.1| flagellar basal-body rod protein FlgF [Methylobacter tundripaludum
           SV96]
 gi|307735517|gb|EFO06365.1| flagellar basal-body rod protein FlgF [Methylobacter tundripaludum
           SV96]
          Length = 246

 Score =  137 bits (344), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 46/238 (19%), Positives = 94/238 (39%), Gaps = 7/238 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  S  I ++         +  A+N++NT T GF++   +F      +         +  
Sbjct: 1   MDRSLYIAMSGAKQTLLAQTANANNLANTQTSGFKSDLEQFRS--RPVSGAGFPTRVYAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASG 119
           + K  +    G+  +TG +LD A+ G+ + A++ +      TR G  +VT +G L + +G
Sbjct: 59  NEKPGVDLSTGAMQTTGGDLDVAINGEGYLAVQGADGKEAYTRAGDLRVTPEGFLQTGAG 118

Query: 120 KYPVLDM----ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
              +            ++    +                +    +  V +  G + + N 
Sbjct: 119 LKVLGQDGPINIPPSEKLSIGSDGTISIIPLGSGNATTQVEIGRIKMVKLEAGNLEKSND 178

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           G+       P+   + V + +G LE SN N++  M  MI L + F   T ++   +++
Sbjct: 179 GLLHAKDGKPVVANADVKLAQGVLEGSNVNAISAMVDMIELARNFELQTKVMKSFDEN 236


>gi|259418017|ref|ZP_05741936.1| flagellar basal-body rod protein FlgF [Silicibacter sp. TrichCH4B]
 gi|259346923|gb|EEW58737.1| flagellar basal-body rod protein FlgF [Silicibacter sp. TrichCH4B]
          Length = 238

 Score =  137 bits (344), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 69/241 (28%), Positives = 115/241 (47%), Gaps = 6/241 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M +     L+ Q  L   +  VA+N++N+ T G+R+  + FSE V +      + +S   
Sbjct: 1   MGSIGYTTLSRQSGLLNEMQAVANNIANSATTGYRSEGLIFSEYVKSAPGQ--ESLSMGR 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           +     S E G+   T    D A+EGD +F +E+P G  LTR G F    +G LV+A G 
Sbjct: 59  ANIRNTSLEQGTMSQTNGSFDLAIEGDGFFMVETPAGNRLTRAGNFTPNAEGDLVTADGY 118

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
              LD    P+ +P   E  + G  G +S  G+ +  +GL+  D     +R +       
Sbjct: 119 RV-LDAGQAPMFVPGDAESISFGADGTLSADGQQLGQIGLFVPDEEAQILREDGVMFRVE 177

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
               P E      V +GFLE SN N+++++ +MI + + +    + +D  +K +  AI N
Sbjct: 178 GETLPAEG---AQVLQGFLEGSNVNTIHQLARMIEVQRAYEMGQSFLDNEDKRIRAAIDN 234

Query: 241 I 241
           +
Sbjct: 235 L 235


>gi|209521590|ref|ZP_03270288.1| flagellar basal-body rod protein FlgF [Burkholderia sp. H160]
 gi|209497973|gb|EDZ98130.1| flagellar basal-body rod protein FlgF [Burkholderia sp. H160]
          Length = 252

 Score =  136 bits (343), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 52/249 (20%), Positives = 98/249 (39%), Gaps = 9/249 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI----DQKI 56
           M       ++      ++ + VA+N++N  T GFR     +  V  +  +      D   
Sbjct: 1   MDRLIYTAMSGSAQALEQQAIVANNLANASTTGFRAQLETYRAVPMSFGDGSTINDDTTR 60

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLV 115
           +FV S         G    TG  LD A++G  W ++++       TR G   + ++G LV
Sbjct: 61  TFVLSSTPGADYTPGPIQQTGNPLDVAIQGPGWLSVQTADGNEAYTRAGNLHIDENGQLV 120

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRR 172
           +A+ +  + +   V +    +  I   G    ++      A + +     V+     + R
Sbjct: 121 NATNQVVLGNGGPVSVPPGAQITIGKDGTVSALTPGDPPTAVVTVDQLKLVNPDPQTLTR 180

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            + G+       P +    VT+    LE SN N +  M  MI   ++F   T L++  +K
Sbjct: 181 SDDGLFRTADGNPADADPTVTLAPASLEGSNVNPVNAMVSMITNARQFQMQTQLLENADK 240

Query: 233 SMLEAIRNI 241
           +   A   +
Sbjct: 241 NDQSA-NQL 248


>gi|299538000|ref|ZP_07051286.1| flagellar basal-body rod protein [Lysinibacillus fusiformis ZC1]
 gi|298726582|gb|EFI67171.1| flagellar basal-body rod protein [Lysinibacillus fusiformis ZC1]
          Length = 277

 Score =  136 bits (343), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 55/278 (19%), Positives = 105/278 (37%), Gaps = 39/278 (14%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVV------------ 45
           M   F       +  ++R   + +N+SN +T GF+  +     F +++            
Sbjct: 1   MFKGFYTVATGMITQQRRTELLTNNLSNANTPGFKADQSTIRSFPDMLMSSIGKTNAPAH 60

Query: 46  ----GAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFAL------------EGDAW 89
                   + +    +     +   +   G   +T    D AL             G  +
Sbjct: 61  QQAGAEYMSQVGALNTGTYLQETLPNYIQGQIYNTDFTTDMALINGNLPQNEDGVTGSIF 120

Query: 90  FALESPRG-IILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI 148
           F LE P G    TR+G F +   G LV+  G Y + D      +I   ++ F + E G I
Sbjct: 121 FRLEHPAGGEAYTRNGNFTLDGQGYLVNGQGLYVLNDAGQ---RIQLPNDDFRLDESGAI 177

Query: 149 SQKGKVIATMGLYSVDMSQGFVRRENSGISP----NIPPTPLEDLSGVTVKRGFLEDSNA 204
               + +A +G+          +++N  I      N+P     +    T+++ FLE SN 
Sbjct: 178 FVNNQQVARVGVSFATNPNMLQKQDNGLIRTENGENLPTAYGANGVSFTLRQNFLEGSNV 237

Query: 205 NSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           +S   M  ++   + F +   ++   ++SM +A+  I 
Sbjct: 238 DSGRTMTDLMTAYRAFEANQKVLQAYDRSMEKAVNEIG 275


>gi|56695101|ref|YP_165448.1| flagellar basal body rod protein FlgF [Ruegeria pomeroyi DSS-3]
 gi|56676838|gb|AAV93504.1| flagellar basal-body rod protein FlgF [Ruegeria pomeroyi DSS-3]
          Length = 216

 Score =  136 bits (343), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 56/220 (25%), Positives = 105/220 (47%), Gaps = 6/220 (2%)

Query: 22  VADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELD 81
           +A+N++N+ T G+R   + FSE V          +S         S+E G    TG + D
Sbjct: 1   MANNIANSATSGYRQQGLVFSEFVR--GGLGTSSLSMARGQVRNTSQEQGVLTQTGGDFD 58

Query: 82  FALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFN 141
            A++G+ +F LE+P G  LTR G F     G LV+  G    +D    PI +P   +   
Sbjct: 59  LAIDGEGFFMLETPGGERLTRAGSFTPNAQGDLVNPDGYRL-IDANGAPIFVPPDIDGVR 117

Query: 142 VGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLED 201
           +G  G IS  G+++  +GL+      G +R        +    P+E     ++ +GFLE 
Sbjct: 118 IGPDGTISGAGRLLGQIGLFKPVDPHGLIREGGVFFRADDGTEPIEG---ASIMQGFLEG 174

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           SN N++ ++ +++ + + +    + +   ++ +  A+ ++
Sbjct: 175 SNVNAIDQVARLVEVQRAYELGQSFLQAEDERIRNAVNSL 214


>gi|289666048|ref|ZP_06487629.1| flagellar basal body rod protein FlgF [Xanthomonas campestris pv.
           vasculorum NCPPB702]
          Length = 251

 Score =  136 bits (343), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 57/245 (23%), Positives = 97/245 (39%), Gaps = 10/245 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  + +    A  Q  STV+ N++N DTVGF+            I+           
Sbjct: 1   MDKALYVAMTGARASLQAQSTVSHNLANVDTVGFKAALANTEAF--KIQGKGYPSRIDAL 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
              +   +  G    TG  LD +L+ D W A++SP      TR+G   +T +G LV+A+G
Sbjct: 59  HVDQGFDRSQGHQKVTGNPLDVSLQQDRWLAVQSPDGSEAYTRNGELALTANGQLVTANG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG----LYSVDMSQGFVRRENS 175
              + +  +     P +           I  +G+   TM     +  VD     + R   
Sbjct: 119 HAVLDEGGTPMTIPPHQAMEIGSDGSISIIPQGEGPQTMAIVGKMKVVDAPADRLTRRPD 178

Query: 176 GISPNIPPTPLEDLSGVT---VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
           G+  N    P +  +  T   +  G LE SN ++   + +MI L ++F     +I   + 
Sbjct: 179 GLMRNTSTDPAQAFAVATGKTINSGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNGDD 238

Query: 233 SMLEA 237
           +   A
Sbjct: 239 NAQSA 243


>gi|99082801|ref|YP_614955.1| flagellar basal body rod protein FlgF [Ruegeria sp. TM1040]
 gi|99039081|gb|ABF65693.1| Flagellar basal-body rod protein flgG [Ruegeria sp. TM1040]
          Length = 238

 Score =  136 bits (343), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 68/241 (28%), Positives = 116/241 (48%), Gaps = 6/241 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M +     L+ Q  L   +  VA+N++N+ T G+R+  + FSE V +      + +S   
Sbjct: 1   MGSIGYTTLSRQSGLLNEMQAVANNIANSATTGYRSEGLIFSEYVKSAPGQ--ESLSMGR 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           +     S E G+   T    D A+EG+ +F +E+P G  LTR G F    +G LV+A G 
Sbjct: 59  ANIRNTSLEQGTMNQTNGTFDLAIEGEGFFMVETPAGNRLTRAGNFTPNAEGDLVTADGY 118

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
              LD    P+ +P   E  + G  G +S  G+ +  +GL+  D     +R +       
Sbjct: 119 RV-LDAGQAPMFVPGGAESISFGADGTLSADGQQLGQIGLFVPDEDAQILREDGVMFRVE 177

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
               P    +G  V +GFLE SN N+++++ +MI + + +    + +D  +K +  AI N
Sbjct: 178 GETLP---AAGAQVLQGFLEGSNVNTIHQLARMIEVQRAYEMGQSFLDHEDKRIRSAIDN 234

Query: 241 I 241
           +
Sbjct: 235 L 235


>gi|170694393|ref|ZP_02885547.1| flagellar basal-body rod protein FlgF [Burkholderia graminis C4D1M]
 gi|170140816|gb|EDT08990.1| flagellar basal-body rod protein FlgF [Burkholderia graminis C4D1M]
          Length = 252

 Score =  136 bits (343), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 54/249 (21%), Positives = 97/249 (38%), Gaps = 9/249 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI----DQKI 56
           M       ++      ++ + VA+N++N  T GFR     F  V  +  +      +   
Sbjct: 1   MDRLIYTAMSGSTQALEQQAIVANNLANASTTGFRAQLATFRAVPMSFGDGSSINDNTTR 60

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLV 115
           +FV S         G    TG  LD A+EG  W A+++       TR G   V  +G LV
Sbjct: 61  TFVLSSTPGADYTPGPIQQTGNPLDVAIEGPGWLAVQTADGNEAYTRAGNLHVDQNGQLV 120

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRR 172
           +A+ +  + +   + +    +  I + G    ++      A + +     V+     + R
Sbjct: 121 NATNQVVLGNGGPISVPPGAQITIGHDGTVTALTPGDPPTAVVTIDQLKLVNPDPQTLTR 180

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            + G+       P +    V V    LE SN N +  M  MI   ++F   T L++  +K
Sbjct: 181 GDDGLFRTADGNPADADPAVAVAPASLEGSNVNPVSAMVSMITNARQFQMQTKLLESADK 240

Query: 233 SMLEAIRNI 241
           +   A   +
Sbjct: 241 NDQSA-NQL 248


>gi|78047585|ref|YP_363760.1| flagellar basal body rod protein FlgF [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|78036015|emb|CAJ23706.1| flagella basal body rod protein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 251

 Score =  136 bits (343), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 58/245 (23%), Positives = 97/245 (39%), Gaps = 10/245 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  + +    A  Q  STV+ N++N DTVGF+            I+           
Sbjct: 1   MDKALYVAMTGARASLQAQSTVSHNLANVDTVGFKAALANTEAF--KIQGKGYPSRIDAL 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
              +   +  G    TG  LD +L+ D W A++SP      TR+G   +T +G LV+A+G
Sbjct: 59  HVDQGFDRSQGHQKVTGNPLDVSLQQDRWLAVQSPDGSEAYTRNGELALTANGQLVTANG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG----LYSVDMSQGFVRRENS 175
              + +  +     P +           I  +G+   TM     +  VD     + R   
Sbjct: 119 HAVLDEGGNPMTIPPHQAMEIGSDGSISIIPQGEGPQTMAIVGKMKVVDAPADRLTRRPD 178

Query: 176 GISPNIPPTPLEDLSGVT---VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
           G+  N    P +  +  T   V  G LE SN ++   + +MI L ++F     +I   + 
Sbjct: 179 GLMRNTSTDPAQAFAVATSKTVNSGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNGDD 238

Query: 233 SMLEA 237
           +   A
Sbjct: 239 NAQSA 243


>gi|32266589|ref|NP_860621.1| flagellar distal rod protein FlgG [Helicobacter hepaticus ATCC
           51449]
 gi|32262640|gb|AAP77687.1| flagellar distal rod protein FlgG [Helicobacter hepaticus ATCC
           51449]
          Length = 277

 Score =  136 bits (343), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 53/274 (19%), Positives = 106/274 (38%), Gaps = 32/274 (11%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           MQ+ +       +    RL  +++N++N +T GF+   V   + +   +   +Q      
Sbjct: 1   MQSGYYNTTGGMVTQFNRLDLISNNLANLNTTGFKRDDVVIGDYLRLFETHKEQLPIEDH 60

Query: 61  SGK-----------------EYLSKEVGSFISTGTELDFAL-EGDAWFALESPRGIILTR 102
           + K                 EY  + +GS   T   LDFAL   +A+F +++P GI  TR
Sbjct: 61  TRKAAKFLNRTMDRVPIISEEYTDRSIGSLAQTDNTLDFALQHQNAFFVVKTPDGIRYTR 120

Query: 103 DGRFKVTDDGSLVSASG-----------KYPVLDMASVPIQIPQKDEIFNVGEKGEISQK 151
           DG F +  DG +VS  G              +     + ++      ++      +   +
Sbjct: 121 DGNFHIDADGHIVSKEGHLVLSRDGLEEGEGISVPTGMHLESDNSGNLYLRNINNDAIAE 180

Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED--LSGVTVKRGFLEDSNANSMYE 209
              I  + +   +  +   +   +            D   +   + +GFLE SN N++ E
Sbjct: 181 QINIGALAVVGFENPRYLKKVGKNFYEYPEERLEERDILQNNGIIAQGFLEKSNVNAVQE 240

Query: 210 MGQMIHLTQKFNSITTLIDEN-EKSMLEAIRNIA 242
           M  +I   +  +  + ++  + ++   EAI  +A
Sbjct: 241 MTSLIETNRLVDMYSKVMKSHMDELNAEAITKLA 274


>gi|84624089|ref|YP_451461.1| flagellar basal body rod protein FlgF [Xanthomonas oryzae pv.
           oryzae MAFF 311018]
 gi|161898986|ref|YP_201213.2| flagellar basal body rod protein FlgF [Xanthomonas oryzae pv.
           oryzae KACC10331]
 gi|84368029|dbj|BAE69187.1| flagellar protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
          Length = 251

 Score =  136 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 57/245 (23%), Positives = 97/245 (39%), Gaps = 10/245 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  + +    A  Q  STV+ N++N DTVGF+            I+           
Sbjct: 1   MDKALYVAMTGARASLQAQSTVSHNLANVDTVGFKAALANTEAF--KIQGKGYPSRIDAL 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
              +   +  G    TG  LD +L+ D W A++SP      TR+G   +T +G LV+A+G
Sbjct: 59  HVDQGFDRSQGHQKVTGNPLDVSLQQDRWLAVQSPDGSEAYTRNGELALTANGQLVTANG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG----LYSVDMSQGFVRRENS 175
              + +  +     P +           I  +G+   TM     +  VD     + R   
Sbjct: 119 HAVLDEGGNPMTIPPHQAMEIGSDGSISIIPQGEGPQTMAIVGKMKVVDAPADRLTRRPD 178

Query: 176 GISPNIPPTPLEDLSGVT---VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
           G+  N    P +  +  T   +  G LE SN ++   + +MI L ++F     +I   + 
Sbjct: 179 GLMRNTSTDPAQAFTVATGKTINSGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNGDD 238

Query: 233 SMLEA 237
           +   A
Sbjct: 239 NAQSA 243


>gi|294625275|ref|ZP_06703914.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 11122]
 gi|292600449|gb|EFF44547.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 11122]
          Length = 251

 Score =  136 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 57/245 (23%), Positives = 96/245 (39%), Gaps = 10/245 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  + +    A  Q  STV+ N++N DTVGF+            I+           
Sbjct: 1   MDKALYVAMTGARASLQAQSTVSHNLANVDTVGFKAALANTEAF--KIQGKGYPSRIDAL 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
              +   +  G    TG  LD +L+ D W A++SP      TR+G   +T +G LV+A+G
Sbjct: 59  HVDQGFDRSQGHQKVTGNPLDVSLQQDRWLAVQSPDGSEAYTRNGELALTANGQLVTANG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG----LYSVDMSQGFVRRENS 175
                +  +     P +           I  +G+   TM     +  VD     + R   
Sbjct: 119 HAVQDEGGNPMTIPPHQAMEIGSDGSISIIPQGEGPQTMAIVGKMKVVDAPADRLTRRPD 178

Query: 176 GISPNIPPTPLEDLSGVT---VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
           G+  N    P +  +  T   +  G LE SN ++   + +MI L ++F     +I   + 
Sbjct: 179 GLMRNTSTDPAQAFAVATGKTINSGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNGDD 238

Query: 233 SMLEA 237
           +   A
Sbjct: 239 NAQSA 243


>gi|226944493|ref|YP_002799566.1| flagellar basal-body rod protein [Azotobacter vinelandii DJ]
 gi|226719420|gb|ACO78591.1| flagellar basal-body rod protein [Azotobacter vinelandii DJ]
          Length = 251

 Score =  136 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 51/245 (20%), Positives = 89/245 (36%), Gaps = 10/245 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       ++       + + VA N++N  T GFR   ++   V   +  +       V 
Sbjct: 1   MDRMLFTAMSGAKQSLDQQAVVAHNLANAVTPGFRAQLMELQAV--PVDGEGLPTRVSVR 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSA-- 117
           +    +    G    TG  LD AL+G+AW A+++       TR G  ++  +G +  A  
Sbjct: 59  ATTSGVDFSQGPVTRTGRPLDVALDGNAWLAIQAADGSEAYTRRGDVQIDGNGLMTVAGH 118

Query: 118 --SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
              G    L +          D   +V E+G+      V+A + L S    +     +  
Sbjct: 119 PLIGDGGPLTVPLGSQVSIGADGTVSVVEEGQDPDTSAVVARLKLVSAAPGELERGEDGL 178

Query: 176 GISPNIP---PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
             +P        PL       +  G LE SN ++   M  MI   +++      ID  + 
Sbjct: 179 FRAPPDDTGVSQPLAVDETARLVTGALEGSNVSATEAMVAMIDNARRYEMQMKAIDSADD 238

Query: 233 SMLEA 237
           +   A
Sbjct: 239 NAQRA 243


>gi|126668559|ref|ZP_01739513.1| Flagellar basal body rod protein [Marinobacter sp. ELB17]
 gi|126626964|gb|EAZ97607.1| Flagellar basal body rod protein [Marinobacter sp. ELB17]
          Length = 250

 Score =  136 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 48/249 (19%), Positives = 97/249 (38%), Gaps = 10/249 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  IG++            A+N++N  T GF+    +   +   +        ++  
Sbjct: 1   MDKALYIGMSGAKQNMLAQRAHANNLANVTTTGFKKDFAQARSM--PVFGGHHPTRAYAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESP-RGIILTRDGRFKVTDDGSLVSASG 119
           + +       G+ + TG +LD A+EGD+W A+++     + TR G  ++  +G L  A+G
Sbjct: 59  TERPGTDLSSGALMETGRKLDVAIEGDSWLAVQNNLGEEVFTRSGSLQIDVNGLLRLANG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV---IATMGLYSVDMSQGFVRRENSG 176
           +  + +   V +      EI   G    +   G     +    L  V      + +   G
Sbjct: 119 EMVLGNGGPVALPPFDNVEIGADGTVSIVPVGGPPDQLVEVDRLKLVTPPTQALEKGPDG 178

Query: 177 ISP----NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
                            +   V  GFLE SN N++ EM   + L++++     ++   ++
Sbjct: 179 FIRRKPDQALGGGEPADANARVSGGFLESSNVNAVAEMISNLQLSRQYEMQVKVMSTAKE 238

Query: 233 SMLEAIRNI 241
           +   A R +
Sbjct: 239 NSEAAARLL 247


>gi|238782793|ref|ZP_04626822.1| Flagellar basal-body rod protein flgF [Yersinia bercovieri ATCC
           43970]
 gi|238716216|gb|EEQ08199.1| Flagellar basal-body rod protein flgF [Yersinia bercovieri ATCC
           43970]
          Length = 251

 Score =  136 bits (342), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 54/251 (21%), Positives = 88/251 (35%), Gaps = 11/251 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A  A   R    ++N++N  T GFR     F  V   I     +  + V 
Sbjct: 1   MDRAIYTAMGAANAALNRQGVTSNNLANASTTGFRAQLSAFRAV--PINGPSVETRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDG-SLVSAS 118
               Y    +G+   TG  LD AL  D W A+E    G   TR G   +  +G   V+  
Sbjct: 59  ESTPYHDDSMGTINQTGRNLDVALPQDGWLAVELLGGGEAYTRAGNIDIDSEGLLRVNGR 118

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS--- 175
                    +VP Q                 ++   +A +G   +  ++    R      
Sbjct: 119 AVLGDGGPINVPPQAELTIAPDGTITALGAGEEPSALAQVGRLKLVNARLQDLRHGDDGL 178

Query: 176 ----GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
                 SPN     L     + +  G LE SN + +  M  MI   + F+    +I   +
Sbjct: 179 FHIAETSPNAGLMALPADQSLQLAPGALESSNVSPVKSMVDMIATARGFDMNIKVISAVD 238

Query: 232 KSMLEAIRNIA 242
            +  +A + +A
Sbjct: 239 DNEKKANQLLA 249


>gi|289548727|ref|YP_003473715.1| fagellar hook-basal body protein [Thermocrinis albus DSM 14484]
 gi|289182344|gb|ADC89588.1| fagellar hook-basal body protein [Thermocrinis albus DSM 14484]
          Length = 241

 Score =  136 bits (342), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 53/244 (21%), Positives = 91/244 (37%), Gaps = 20/244 (8%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS--------EVVGAIKNDIDQKI 56
             +  +  +  +++L  + +NM+N  T  F+   +  S         V            
Sbjct: 8   MYVLASGMMLSQRKLEVITNNMANVSTPSFKRDVMLASVWQAPTPLSVPSVDPRLPQNNF 67

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVS 116
            +   G  Y     G    TG   D A++GD +FA+ S   ++ TR G F++  DG LV+
Sbjct: 68  LYPVVGGIYTDLRQGGLRHTGNSTDLAIDGDGFFAVSSGNEVLYTRKGNFRLDKDGYLVN 127

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
             G   + D  S        D    + E G I   G     +G+Y ++  Q        G
Sbjct: 128 ELGMRILTDNGSPVR----VDGDLRITEDGSIFSGGLFYGRLGIYRLEGPQKIGSDLFRG 183

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
            +               V +GFLED+N N + E+ ++I   +     T LI   ++   +
Sbjct: 184 RATP--------SERFKVLQGFLEDANVNPIEELVKLIEAHRAHEIYTNLIRSLDQLQEK 235

Query: 237 AIRN 240
               
Sbjct: 236 ITNQ 239


>gi|259907635|ref|YP_002647991.1| Flagellar basal-body rod protein FlgF [Erwinia pyrifoliae Ep1/96]
 gi|224963257|emb|CAX54741.1| Flagellar basal-body rod protein FlgF [Erwinia pyrifoliae Ep1/96]
 gi|283477477|emb|CAY73393.1| Flagellar basal-body rod protein flgF [Erwinia pyrifoliae DSM
           12163]
          Length = 245

 Score =  136 bits (342), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 52/245 (21%), Positives = 89/245 (36%), Gaps = 8/245 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    ++A  A   R +  ++NM+N  T GFR     F  V   ++ +     + V 
Sbjct: 1   MDRAIYTAMSAANAALNRQAVTSNNMANAATTGFRAQMAAFRAV--PVEGETIATRALVV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
               Y    +G    TG  LD AL  + W A+  P      TR+G  +V  DG  +S +G
Sbjct: 59  DSTPYHDGSMGPLNHTGRSLDVALPQNGWLAVAMPDGTEGYTRNGAIEVDRDG-ALSVNG 117

Query: 120 KYPVLDM---ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
              + D       P           +   G       V     L   + S   +   + G
Sbjct: 118 YPLMGDGAPLTVPPQSAVTIAPDGTLTALGAGDDPTTVTPVGRLKMANASIQDLLHGDEG 177

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           +        L   +G+ +    LE SN + +  M +MI   + F+     I   +++  +
Sbjct: 178 LFHPKAGDSLPVDAGLRLSPETLEGSNVSPVKAMTEMIATARSFDMNMKTIRTADENAKQ 237

Query: 237 AIRNI 241
           A   +
Sbjct: 238 A-NQL 241


>gi|167463160|ref|ZP_02328249.1| flagellar basal-body rod protein [Paenibacillus larvae subsp.
           larvae BRL-230010]
 gi|322383080|ref|ZP_08056907.1| flagellar basal-body rod-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321152742|gb|EFX45368.1| flagellar basal-body rod-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 297

 Score =  136 bits (342), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 43/295 (14%), Positives = 91/295 (30%), Gaps = 53/295 (17%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51
           M        +  +A +++  T  +N++N +T G++        F E++ +   D      
Sbjct: 1   MLRGLYTASSGMIAQQRKHDTATNNIANMNTPGYKQSTALSRSFPEMLISRFRDDETGTQ 60

Query: 52  -IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGD----------------------- 87
            + +  + V   +       G    T    DFA+  D                       
Sbjct: 61  QVGRLHTGVLMEENVAIPVQGVIEETRNPFDFAIVSDLQVPGAAFNGAGIYVNEDGETIY 120

Query: 88  ----AWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVG 143
                +        I  T +G+F V  +G LV+A G   + +       I          
Sbjct: 121 KPQAYFMVENQAGEIRYTSNGKFHVDGNGFLVNAEGLRVLDNNRRPMQLINLLTNEPIKS 180

Query: 144 EKG------------EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP----LE 187
            +                   +    +GL  V      +   N     N         ++
Sbjct: 181 VQVSNEGNILDENGYPYMNANEEPVRIGLAKVSDPHKLMHEGNGLYYLNQEDQALAEDVQ 240

Query: 188 DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
               V +++GF+E SN +    M  M+   + + +   ++   +KS+ + +  + 
Sbjct: 241 PGDNVMIRQGFVEQSNVDPTQVMVDMMSALRAYEANQKMVQFYDKSLEKTVNEVG 295


>gi|310764859|gb|ADP09809.1| Flagellar basal-body rod protein FlgF [Erwinia sp. Ejp617]
          Length = 245

 Score =  136 bits (342), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 52/245 (21%), Positives = 89/245 (36%), Gaps = 8/245 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    ++A  A   R +  ++NM+N  T GFR     F  V   ++ +     + V 
Sbjct: 1   MDRAIYTAMSAANAALNRQAVTSNNMANAATTGFRAQMAAFRAV--PVEGETIATRALVV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
               Y    +G    TG  LD AL  + W A+  P      TR+G  +V  DG  +S +G
Sbjct: 59  DSTPYHDGSMGPLNHTGRSLDVALPQNGWLAVAMPDGTEGYTRNGAIEVDRDG-ALSVNG 117

Query: 120 KYPVLDM---ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
              + D       P           +   G       V     L   + S   +   + G
Sbjct: 118 YPLMGDGAPLTVPPQSAVTIAPDGTLTALGAGDDPTTVTPVGRLKMANASIQDLLHGDEG 177

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           +        L   +G+ +    LE SN + +  M +MI   + F+     I   +++  +
Sbjct: 178 LFHPKTGDSLPVDAGLRLSPETLEGSNVSPVKAMTEMIATARSFDMNMKTIRTADENAKQ 237

Query: 237 AIRNI 241
           A   +
Sbjct: 238 A-NQL 241


>gi|21242726|ref|NP_642308.1| flagellar basal body rod protein FlgF [Xanthomonas axonopodis pv.
           citri str. 306]
 gi|21108202|gb|AAM36844.1| flagellar protein [Xanthomonas axonopodis pv. citri str. 306]
          Length = 251

 Score =  136 bits (342), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 56/245 (22%), Positives = 96/245 (39%), Gaps = 10/245 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  + +    A  Q   TV+ N++N DTVGF+            I+           
Sbjct: 1   MDKALYVAMTGARASLQAQGTVSHNLANVDTVGFKAALANTEAF--KIQGKGYPSRIDAL 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
              +   +  G    TG  LD +L+ D W A++SP      TR+G   +T +G LV+A+G
Sbjct: 59  HVDQGFDRSQGHQKVTGNPLDVSLQQDRWLAVQSPDGSEAYTRNGELALTANGQLVTANG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG----LYSVDMSQGFVRRENS 175
              + +  +     P +           I  +G+   TM     +  VD     + R   
Sbjct: 119 HAVLDEGGNPMTIPPHQAMEIGSDGSISIIPQGEGPQTMAIVGKMKVVDAPADRLTRRPD 178

Query: 176 GISPNIPPTPLEDLSGVT---VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
           G+  N    P +  +  T   +  G LE SN ++   + +MI L ++F     +I   + 
Sbjct: 179 GLMRNTSTDPAQAFAVATGKTINSGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNGDD 238

Query: 233 SMLEA 237
           +   A
Sbjct: 239 NAQSA 243


>gi|88811802|ref|ZP_01127056.1| hypothetical protein NB231_05335 [Nitrococcus mobilis Nb-231]
 gi|88791193|gb|EAR22306.1| hypothetical protein NB231_05335 [Nitrococcus mobilis Nb-231]
          Length = 246

 Score =  136 bits (342), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 48/246 (19%), Positives = 87/246 (35%), Gaps = 9/246 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     I +       +       N++N +T GFR        +   +         +  
Sbjct: 1   MDRYLYIAMTGAKHALKAQQVNNHNLANANTPGFRADLDAL--LSRPVAGPGYPSRVYSV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASG 119
                 S   G  I+TG  LD AL G  W A++        TR G  ++T  G L + +G
Sbjct: 59  ETALGSSFAPGHLITTGRSLDVALNGAGWLAVQARDGTEAYTRRGDLRITAGGLLQTGAG 118

Query: 120 KYPVL---DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           +  +     +A  P +     +   +                 L  V+     +R+   G
Sbjct: 119 QLVLGNGGPVAIPPAKQVSIGQDGTITVIPIGQPDNAPAVVDRLRLVNPPSAALRKGEDG 178

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN---EKS 233
           +      T     +GV+V  G LE SN N++  +  MI   ++F +   L++     +++
Sbjct: 179 LFRLEGGTAATADAGVSVVSGALESSNVNTVDALVNMIGNARRFEAYVKLMESAKSNDET 238

Query: 234 MLEAIR 239
               +R
Sbjct: 239 GQRLLR 244


>gi|167770195|ref|ZP_02442248.1| hypothetical protein ANACOL_01538 [Anaerotruncus colihominis DSM
           17241]
 gi|167667517|gb|EDS11647.1| hypothetical protein ANACOL_01538 [Anaerotruncus colihominis DSM
           17241]
          Length = 273

 Score =  136 bits (341), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 53/283 (18%), Positives = 100/283 (35%), Gaps = 51/283 (18%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK----------- 49
           M  +F  G++  +A +Q +  V++N++N +TVG++  +  FS+++               
Sbjct: 1   MNIAFYNGVSGLVAYQQEMDLVSNNVANVNTVGYKPSRASFSDLLYTQMWTNTDALVNAG 60

Query: 50  --------------------NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAW 89
                               + I  +   V      L    G+ + T   LD A++GD +
Sbjct: 61  GDAGAQDTADENGVGGMTDADGIHMQGHGVRLAYSDLVFRQGNLLQTEHPLDMAIKGDGF 120

Query: 90  FALESPRGII-LTRDGRFKVT---DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEK 145
           FA+E   G    TR+G F ++     G LV++ G Y +               I      
Sbjct: 121 FAVERANGTTEYTRNGAFDISIEGKSGYLVTSDGSYVLD---------ASGKRIKLDRGD 171

Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPL------EDLSGVTVKRGFL 199
            +      +   +G+Y      G            I  TP             T+  G L
Sbjct: 172 DDQFDLTNLQDEVGVYIFPNPYGLEPNTGGFRETPISGTPTVIKASSRASRPYTIVTGML 231

Query: 200 EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           E S  +   EM  +I   + F     ++   ++ + + + N+ 
Sbjct: 232 EQSAVDLSEEMANIIVSQRAFQFSAKMVQTADE-IEDTVNNLR 273


>gi|15616300|ref|NP_244605.1| flagellar basal-body rod protein [Bacillus halodurans C-125]
 gi|10176362|dbj|BAB07457.1| flagellar basal-body rod protein [Bacillus halodurans C-125]
          Length = 274

 Score =  136 bits (341), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 47/274 (17%), Positives = 96/274 (35%), Gaps = 35/274 (12%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDI----- 52
           M        A  +  +QR   + +N++N +T G++  +     F  ++ A  N       
Sbjct: 1   MLRGLWGAAAGMITQQQRQEMLTNNLANVNTPGYKADQAAIRAFPNMLIAAMNTGNVPKG 60

Query: 53  -----DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA--------------WFALE 93
                 +  + V   +   +   G  + T    D AL                  +    
Sbjct: 61  VAPVIGELTTGVYLQERMPNFRQGDLVETQNNTDVALLQGVMPTNEENGQPWALFYTVQN 120

Query: 94  SPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEIS---- 149
               +  TR+G F V  DG L +  G Y +    +      +   +   G   + +    
Sbjct: 121 ENGEVRYTRNGNFTVDGDGFLTTGDGFYVLGTDGNPLQVNNEWFNVDGDGMITDEAGAAI 180

Query: 150 -QKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMY 208
            Q   V+A   +  V    G +R E  G  P        +     +++GF+E SN ++  
Sbjct: 181 GQINVVVAEDPMQLVKEGNGLLRFEGDGELPTGVGNAAVN---YQLQQGFIERSNVDAAQ 237

Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            M +M+   + F +   ++   ++S+ +A+  + 
Sbjct: 238 TMTEMMQAYRTFEANQQVLRAYDESLGKAVNEVG 271


>gi|160939651|ref|ZP_02086999.1| hypothetical protein CLOBOL_04543 [Clostridium bolteae ATCC
           BAA-613]
 gi|158437442|gb|EDP15206.1| hypothetical protein CLOBOL_04543 [Clostridium bolteae ATCC
           BAA-613]
          Length = 244

 Score =  136 bits (341), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 52/245 (21%), Positives = 102/245 (41%), Gaps = 15/245 (6%)

Query: 12  QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN--DIDQKISFVASGKEYLSKE 69
             A ++ L   ++NM+N  T G+++++  F++++    +     Q    V +     + +
Sbjct: 1   MNAFQKDLDVTSNNMANISTNGYKSMRSSFNDLLYTQMDMRPQAQVGHGVRNDGPGTTFQ 60

Query: 70  VGSFISTGTELDFALEGDAWFALESPRGI---ILTRDGRFKVT--DDGSLVSASGKYPVL 124
            G F  T  ELDFA+ G+A+FA+++         TRDG F+++  DDG+ ++ S    VL
Sbjct: 61  QGIFRKTDRELDFAISGNAFFAIQTSEDEEEPAYTRDGAFQISSTDDGNYLTTSDGSYVL 120

Query: 125 DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT 184
           D    PI++  K                 ++  +GL+  +  +G      +         
Sbjct: 121 DQDGEPIELEYKTSEDGGDNDAGELDLDGLVERIGLFVCENPEGLQHVGMNLFRTGETSG 180

Query: 185 P-------LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                    ++          LE SN N   EM  ++   + F   + ++   ++ M E 
Sbjct: 181 EWLSMDDLDDEQEKSKAMSHALEMSNCNMSTEMVNLMQTQRAFQLNSRIVTTADQ-MEEM 239

Query: 238 IRNIA 242
           I N+ 
Sbjct: 240 INNLR 244


>gi|171321214|ref|ZP_02910184.1| protein of unknown function DUF1078 domain protein [Burkholderia
           ambifaria MEX-5]
 gi|171093524|gb|EDT38694.1| protein of unknown function DUF1078 domain protein [Burkholderia
           ambifaria MEX-5]
          Length = 234

 Score =  136 bits (341), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 48/242 (19%), Positives = 91/242 (37%), Gaps = 10/242 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + L       QR  T A N+SN  T G+R     F +++               
Sbjct: 1   MDDLMTLSLRLISLETQRAETAARNLSNVATPGYRREIA-FQDMLANDVTPAG----GGP 55

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
                     G  + TG   D A++GD +F +++  G   TR G F    DG LV+ +G 
Sbjct: 56  PIHRLTDFSPGRLVRTGDPFDLAIDGDGFFQVQTDSGPAYTRTGAFLRAADGRLVTRAGG 115

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
           +P+         I    + + V   G +   G   + + + + D      R  +   +P 
Sbjct: 116 WPLQGAHGD---IVVSLDGWRVDADGTVLDHGVPTSVIRVATFDAPSRLQRIADGLYAPR 172

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
                    +   + +GF+E SN ++  +M ++I   ++  +   L+   +  M   ++ 
Sbjct: 173 DTV--GMRDAPTRLAQGFVETSNVSAADDMVRLIEAMRRVETGQKLVHAYDDLMGSVLQR 230

Query: 241 IA 242
           + 
Sbjct: 231 LG 232


>gi|295678057|ref|YP_003606581.1| flagellar basal-body rod protein FlgF [Burkholderia sp. CCGE1002]
 gi|295437900|gb|ADG17070.1| flagellar basal-body rod protein FlgF [Burkholderia sp. CCGE1002]
          Length = 252

 Score =  136 bits (341), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 51/249 (20%), Positives = 98/249 (39%), Gaps = 8/249 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI----DQKI 56
           M       ++      ++ + VA+N++N  T GFR     +  V  +  +      +   
Sbjct: 1   MDRLIYTAMSGSAQALEQQAIVANNLANASTTGFRAQLETYRAVPMSFGDGSTINDNTTR 60

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLV 115
           +FV S         G    TG  LD A++G  W ++++       TR G   + ++G LV
Sbjct: 61  TFVLSSTPGADFTPGPIQQTGNPLDVAIQGAGWLSVQTADGNEAYTRAGNLHIDENGQLV 120

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRR 172
           +A+ +  + +   V +    +  I   G    ++      A + +     V+     + R
Sbjct: 121 NATNQVVLGNGGPVSVPPGAQITIGKDGTVTALTPGDPPTAVVTIDQLKLVNPDPQSITR 180

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            + G+       P +    VT+    LE SN N +  M  MI   ++F   T L+   +K
Sbjct: 181 GDDGLFRTADGNPADADPTVTLAPASLEGSNVNPVSAMVSMITNARQFQMQTQLLQNADK 240

Query: 233 SMLEAIRNI 241
           +   A + +
Sbjct: 241 NDQSANQIL 249


>gi|294501851|ref|YP_003565551.1| flagellar hook-basal body complex protein FlhO [Bacillus megaterium
           QM B1551]
 gi|294351788|gb|ADE72117.1| flagellar hook-basal body complex protein FlhO [Bacillus megaterium
           QM B1551]
          Length = 274

 Score =  135 bits (340), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 48/274 (17%), Positives = 97/274 (35%), Gaps = 35/274 (12%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIK---VKFSEVVGAIKN------- 50
           M   F    A  L+ +++   + +N++N +T GF+  +     F +++            
Sbjct: 1   MFKGFYTAAAGMLSQQRQTDLLTNNIANANTPGFKADQGTLKAFPDMLLQRMESEDLPTD 60

Query: 51  ---------DIDQKISFVASGKEYLSKEVGSFISTGTELDFALE---------GDAWFAL 92
                    DI    + V   +   +   G    T    D AL          G  +   
Sbjct: 61  RSISVQNKKDIGAINTGVYMQETVPNFTQGDLQQTSQSTDIALMEQNMPTKEGGLFFVVQ 120

Query: 93  ESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG 152
                   TR+  F +  +G L +++G Y +         I  K E F V  +G +++  
Sbjct: 121 SPDNTPQYTRNSNFTLDQEGFLTTSTGAYVLNTNNQP---IQLKSENFTVDSQGNVTENN 177

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISP----NIPPTPLEDLSGVTVKRGFLEDSNANSMY 208
           + +A + +      Q   +  N          +P           +K+GF+E SN ++  
Sbjct: 178 QQVAQIDIAYASDLQTIKKAGNGLYETLNNQPLPSARNNPGISYQLKQGFVERSNVDAAQ 237

Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            M  ++   + F +   ++   ++SM +A   I 
Sbjct: 238 NMTDLLTAYRAFEANQKIMQAYDRSMDKAANEIG 271


>gi|253682640|ref|ZP_04863437.1| flagellar basal-body rod protein FlgG [Clostridium botulinum D str.
           1873]
 gi|253562352|gb|EES91804.1| flagellar basal-body rod protein FlgG [Clostridium botulinum D str.
           1873]
          Length = 333

 Score =  135 bits (340), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 49/330 (14%), Positives = 95/330 (28%), Gaps = 91/330 (27%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50
           M  S   G++     + +L    +N++N  T  F+  +V+F +++               
Sbjct: 1   MLRSMYAGISGMKVNQTKLDVTGNNIANVSTTAFKGSRVRFQDMLSQNVQEAVGPGKNLG 60

Query: 51  --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF------------------ 90
             +  Q    V+          G    T   LD A++G  +                   
Sbjct: 61  GVNGRQVGLGVSVAGIDTVVSQGMLQPTSRNLDVAIDGTGYLVVAKGKLGESSADTGIEL 120

Query: 91  -----ALESPRGIILTRDGRFKVTDDGSLVSASGKYPVL--------------------- 124
                   S   I  TRDG F +  +G+L+++ G   +                      
Sbjct: 121 NDGNINENSNFQINYTRDGAFALDYEGNLLTSEGYRVMGYAIEGADIDYKKDGIVKFKNV 180

Query: 125 -DMASVPIQIPQKDEIFNVGEKGEISQKGK-----------------------VIATMGL 160
                +  +I +   +      GE    GK                        +  + +
Sbjct: 181 DGDDELKAKIDRLVPLKIPELVGEDKDNGKKMRSFSIEKNGLIKGVLDDGTITALGQIAM 240

Query: 161 YSVDMSQGFVRRENSGISPN-----------IPPTPLEDLSGVTVKRGFLEDSNANSMYE 209
            S    +G  +   +  S             I        S   + +G LE SN +   +
Sbjct: 241 TSFKNPEGLKKEGKNMYSNTPNSGKPVFRSGIGADKDNSESYGDMIQGMLEMSNVDLAEQ 300

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              MI  T+ F +   +I   ++ + + I 
Sbjct: 301 FTDMIVTTRAFQASGKMISTGDEILQDIIN 330


>gi|188991640|ref|YP_001903650.1| flagellar basal body rod protein FlgF [Xanthomonas campestris pv.
           campestris str. B100]
 gi|167733400|emb|CAP51601.1| Flagellar basal-body rod protein flgF [Xanthomonas campestris pv.
           campestris]
          Length = 251

 Score =  135 bits (340), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 58/245 (23%), Positives = 97/245 (39%), Gaps = 10/245 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  + +    A  Q  STV+ N++N DTVGF+            I+           
Sbjct: 1   MDKALYVAMTGARASLQAQSTVSHNLANVDTVGFKAALANTEAF--QIRGKGYPSRIDAL 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
              +   +  G    TG  LD +L+ D W A++SP      TR+G   +T +G LV+A+G
Sbjct: 59  HVDQGFDRSQGHQKVTGNPLDVSLQQDRWLAVQSPDGSEAYTRNGELALTANGQLVTANG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG----LYSVDMSQGFVRRENS 175
              + +  +     P +           I  +G+   TM     +  VD     + R   
Sbjct: 119 HAVLDEGGNPMTIPPHQAMEIGSDGSISIIPQGEGPPTMAIVGKMKVVDAPADRLTRRPD 178

Query: 176 GISPNIPPTPLEDLSGVT---VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
           G+  N    P +  +  T   V  G LE SN ++   + +MI L ++F     +I   + 
Sbjct: 179 GLMRNTSTDPAQAFAVATGKTVNSGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNGDD 238

Query: 233 SMLEA 237
           +   A
Sbjct: 239 NAQSA 243


>gi|229917023|ref|YP_002885669.1| flagellar basal body rod protein [Exiguobacterium sp. AT1b]
 gi|229468452|gb|ACQ70224.1| flagellar basal body rod protein [Exiguobacterium sp. AT1b]
          Length = 257

 Score =  135 bits (340), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 60/258 (23%), Positives = 104/258 (40%), Gaps = 27/258 (10%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIK---VKFSEVV-----------G 46
           M         A  AL+++   +++N+ N  T GF+        F E++            
Sbjct: 1   MLRGLYTAAGAMNALQRQQEILSNNLGNVRTPGFKASDGVVRSFPEMLLAQVSNPDNAKS 60

Query: 47  AIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALE------GDAWFALESPRGIIL 100
            +K ++      V   +       GS   +G+  D  L+      G   FA+E     + 
Sbjct: 61  RVKGEVGTLSMGVYLQETMPRFSAGSITESGSPTDLYLKAPTDFTGAPMFAVEQGGETLY 120

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           T +GRF + +   L SA G Y + D      +I      F VG+ G I+  G+ +AT+G 
Sbjct: 121 TTNGRFSIDEALFLRSADGGYILSDE---GERIQLPSSEFQVGKDGVITSLGQNVATLGA 177

Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
           Y +D      +  N        P P    + V V +GF+E++N N    M  ++   ++F
Sbjct: 178 YQIDDLTTLEQVGNDWRVTGDAPAP----AQVEVLQGFIEEANVNLDQTMADLMMTYRQF 233

Query: 221 NSITTLIDENEKSMLEAI 238
            +   ++   +KS   AI
Sbjct: 234 EANQKVVQAYDKSAERAI 251


>gi|223040701|ref|ZP_03610970.1| flagellar basal-body rod protein [Campylobacter rectus RM3267]
 gi|222878065|gb|EEF13177.1| flagellar basal-body rod protein [Campylobacter rectus RM3267]
          Length = 270

 Score =  135 bits (340), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 46/267 (17%), Positives = 101/267 (37%), Gaps = 24/267 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDID---- 53
           M   +     A +    RL  +A+N++N +T+GF+   V    F  +    ++++     
Sbjct: 1   MNNGYYQATGAMVTQFNRLDVIANNLANINTIGFKRDDVVVGDFERIFKEYRDELPIKNH 60

Query: 54  ----------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDA--WFALESPRGIILT 101
                              ++Y+    G    +  +LDFA++ +   +     P  + LT
Sbjct: 61  TKDAAKFLNRTIDRVPQISEQYVDFSQGGLKFSNNDLDFAMKREDLFFLVEVKPGDVRLT 120

Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMA---SVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158
           ++G F + +DG LV+  G   +       +       + E F+  + G +    + +A +
Sbjct: 121 KNGSFNLDEDGFLVTKEGYKVLPSDYFSNNFQGIQIPEGERFSADKNGNLYSNEEPLARL 180

Query: 159 GLYSVDMSQGFVRRENSGIS-PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217
            +      +   +  ++    PN+            V   + + SN N++ EM  +I   
Sbjct: 181 YIAQPKEIRNLTKEGDNLYVLPNLKELEDVGGEIDAVAWKYTQISNVNAVTEMVGLIETQ 240

Query: 218 QKFNSITTLIDEN-EKSMLEAIRNIAS 243
           +       ++  + +    EAI  +AS
Sbjct: 241 RFVEMYQKVMTSHMDDLNQEAISKLAS 267


>gi|190574262|ref|YP_001972107.1| flagellar basal body rod protein FlgF [Stenotrophomonas maltophilia
           K279a]
 gi|190012184|emb|CAQ45807.1| putative flagellar basal-body rod protein [Stenotrophomonas
           maltophilia K279a]
          Length = 249

 Score =  135 bits (340), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 53/253 (20%), Positives = 90/253 (35%), Gaps = 14/253 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  + +    A  Q   T++ N++N+DT GF+            IK           
Sbjct: 1   MDKALYVAMTGARASLQAQGTLSHNLANSDTPGFKEALANTEAF--PIKGPGFASRVDAL 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119
                 ++  GS   TG  LD +L+   W A   S      TR     VT +G LV++SG
Sbjct: 59  HVDAGFNRTPGSQHITGKPLDLSLQTGTWLAVQSSDGSEAYTRGAALSVTPNGQLVTSSG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172
           +  + D  +         +   +G  G IS   +      +  +          +   R 
Sbjct: 119 RPVLDDNNNPIAI--PPYQAMEIGADGTISIIPQGEGPQTMAQIGRIKVVQAPDERLERG 176

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            +       P  P     G  V  G LE SN ++   + QMI L +++     +I   ++
Sbjct: 177 LDGLFRNTDPRQPFAPAQGTAVHSGQLEGSNVDAAGALVQMIQLQRQYEMQVQVIKHGDE 236

Query: 233 SMLEAIR--NIAS 243
           +   A     + S
Sbjct: 237 NARSANSMLRLGS 249


>gi|149184207|ref|ZP_01862525.1| hypothetical protein ED21_25853 [Erythrobacter sp. SD-21]
 gi|148831527|gb|EDL49960.1| hypothetical protein ED21_25853 [Erythrobacter sp. SD-21]
          Length = 261

 Score =  135 bits (340), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 47/258 (18%), Positives = 88/258 (34%), Gaps = 30/258 (11%)

Query: 12  QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS--GKEYLSKE 69
               +  L  ++ N++N++T GF+  + +FSE+V        + I  + +       +  
Sbjct: 1   MKNAQTSLGVISHNIANSETYGFKRSRTEFSEIVAGSALTNPRMIQGIGASVKSITQNFA 60

Query: 70  VGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRFKVTDDGSLVSASGKYPVLDMA 127
           +G    TG+ LD A+ GD +F   S      + TR G F ++  G++V +SG    L   
Sbjct: 61  LGPIEQTGSALDLAITGDGFFTTRSAADGSTLYTRSGSFSLSGTGNIVDSSGNRLQLFPV 120

Query: 128 SVPIQIPQKDEIFNVGEKGEISQKGKV---------------------IATMGLYSVDMS 166
               Q+              ++    V                     +  + L +    
Sbjct: 121 DANGQVTGNTLGDANLPPQNLAGSEFVGVTINEVGVVSASYADGSVEPVGAIALATFIAP 180

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFN 221
            G  +  ++              S  T     +  G LE SN +   E+  +I   + F 
Sbjct: 181 TGLKKVGDANWEGTGLSGAATYGSPGTGAYGSLLSGALERSNVDIAEELVGLITAQRNFQ 240

Query: 222 SITTLIDENEKSMLEAIR 239
           +    ID   +     I 
Sbjct: 241 ANAKAIDTATQISQTVIN 258


>gi|325918878|ref|ZP_08180955.1| flagellar basal-body rod protein FlgF, proteobacterial [Xanthomonas
           vesicatoria ATCC 35937]
 gi|325534915|gb|EGD06834.1| flagellar basal-body rod protein FlgF, proteobacterial [Xanthomonas
           vesicatoria ATCC 35937]
          Length = 251

 Score =  135 bits (339), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 57/247 (23%), Positives = 94/247 (38%), Gaps = 14/247 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  + +    A  Q  STV+ N++N DTVGF+            I+           
Sbjct: 1   MDKALYVAMTGARASLQAQSTVSHNLANVDTVGFKAALANTEAF--KIQGKGYPSRIDAL 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
              +   +  G    TG  LD +L+ D W A++SP      TR+G   +T +G LV+A+G
Sbjct: 59  HVDQGFDRSQGHQKVTGNPLDVSLQQDRWLAVQSPDGSEAYTRNGELALTANGQLVTANG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLY------SVDMSQGFVRRE 173
              +              +   +G  G IS   +      +        VD     + R 
Sbjct: 119 HAVL--DEGGNPMTIPPHQAMEIGSDGSISIIPQGEGPQAMDIVGKMKVVDAPADRLTRR 176

Query: 174 NSGISPNIPPTPLEDLSGVT---VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
             G+  N    P +  +  T   V  G LE SN ++   + +MI L ++F     +I   
Sbjct: 177 PDGLMRNTSTDPAQAFAVATGKTVNGGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNG 236

Query: 231 EKSMLEA 237
           + +   A
Sbjct: 237 DDNAQSA 243


>gi|291562027|emb|CBL40843.1| fagellar hook-basal body proteins [butyrate-producing bacterium
           SS3/4]
          Length = 305

 Score =  135 bits (339), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 43/302 (14%), Positives = 95/302 (31%), Gaps = 63/302 (20%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  + +  ++   A + +L  + +N++N +T GF++    F E +        +      
Sbjct: 1   MLRAMDSAVSGLRAHQNKLDVIGNNIANVNTFGFKSQSYSFKEAMYQTSTTSTKGSENAG 60

Query: 61  SGKEYLSKEVGSFISTGTEL-----------DFALEGDAWFALESPRGII---------- 99
                         S  T++           + +++G+ +F                   
Sbjct: 61  GVNAAQYGYGSMMGSISTDMSASTPTYVGGLNASVDGEGFFITFPKSTETVTVADMKKTD 120

Query: 100 --LTRDGRFKVTDDGSLVSASGKYPVL-----------------------DMASVPIQIP 134
              TR G+F +  +G L  A+G +                          D+       P
Sbjct: 121 FDYTRVGQFNIDGNGYLTDANGNFVYGFRPDAVDKPTKFDGDLVAIKVPSDVTGADFDDP 180

Query: 135 QKDEIFNVGEKGEISQ-----------KGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183
            +     +   GEIS            K   I  + + +    +G  ++ +         
Sbjct: 181 LQLTNVKINSLGEISGTVKSTDPDKDGKTVSIGKVAIATFQNPEGLSKKGSFYYGAAESD 240

Query: 184 T------PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                   +   S  ++  G+LE SN +   E   MI   + F + + +I  +++ + + 
Sbjct: 241 NSGNASATIPGGSTSSLMTGYLEASNVDLAKEFSDMITTQRGFQANSKIITVSDEILSDL 300

Query: 238 IR 239
           I 
Sbjct: 301 IN 302


>gi|304407726|ref|ZP_07389377.1| fagellar hook-basal body protein [Paenibacillus curdlanolyticus
           YK9]
 gi|304343209|gb|EFM09052.1| fagellar hook-basal body protein [Paenibacillus curdlanolyticus
           YK9]
          Length = 270

 Score =  135 bits (339), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 50/271 (18%), Positives = 103/271 (38%), Gaps = 29/271 (10%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S    + +   L+Q+L  +ADN++N +TVG++     F +++   K           
Sbjct: 1   MNGSMINAMVSMNGLQQKLDILADNIANLNTVGYKRKDASFEDLLTNAKQQPSAFKEPGR 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107
                  +   V           G    TG  LD A+EG+A + + +P G   TR+G F+
Sbjct: 61  MSPMNYTQGWGVRLATIEPDLSQGPLQQTGNTLDIAIEGNALYEVRTPDGTAYTRNGSFQ 120

Query: 108 VTD--DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ-----KGKVIATMGL 160
           ++   +GS V A+    +L   +    +   +    V   G +           +  + L
Sbjct: 121 LSPLANGSSVLATSDGNLLMGENDQPIVVPANHTIRVDADGTVQAVAGDGSASPVGKLKL 180

Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLE--------DLSGVTVKRGFLEDSNANSMYEMGQ 212
                        ++  +        +          S V++++G++E SN +   EM  
Sbjct: 181 LQATRPSLLTTVADNLYAVAEGVNVEDVLRTVSAGADSKVSLRQGYVEQSNVDMTSEMTD 240

Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           +I++ + +      +  ++  M  A  N+ +
Sbjct: 241 LINVQRAYQLSARALTSSDSMMGFA-NNLRA 270


>gi|294664592|ref|ZP_06729933.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 10535]
 gi|292605649|gb|EFF48959.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 10535]
          Length = 249

 Score =  135 bits (339), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 57/245 (23%), Positives = 97/245 (39%), Gaps = 10/245 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  + +    A  Q  STV+ N++N DTVGF+            I+           
Sbjct: 1   MDKALYVAMTGARASLQAQSTVSHNLANVDTVGFKAALANTEAF--KIQGKGYPSRIDAL 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
              +   +  G    TG  LD +L+ D W A++SP      TR+G   +T +G LV+A+G
Sbjct: 59  HVDQGFDRSQGHQKVTGNPLDVSLQQDRWLAVQSPDGSEAYTRNGELALTANGQLVTANG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG----LYSVDMSQGFVRRENS 175
              + +  +     P +           I  +G+   TM     +  VD     + R   
Sbjct: 119 HAVLDEGGNPMTIPPHQAMEIGSDGSISIIPQGEGPQTMAIVGKMKVVDAPADRLTRRPD 178

Query: 176 GISPNIPPTPLEDLSGVT---VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
           G+  N    P +  +  T   +  G LE SN ++   + +MI L ++F     +I   + 
Sbjct: 179 GLMRNTSTDPAQAFAVATGKTINSGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNGDD 238

Query: 233 SMLEA 237
           +   A
Sbjct: 239 NGQSA 243


>gi|261420740|ref|YP_003254422.1| fagellar hook-basal body protein [Geobacillus sp. Y412MC61]
 gi|319768410|ref|YP_004133911.1| flagellar hook-basal body protein [Geobacillus sp. Y412MC52]
 gi|261377197|gb|ACX79940.1| fagellar hook-basal body protein [Geobacillus sp. Y412MC61]
 gi|317113276|gb|ADU95768.1| flagellar hook-basal body protein [Geobacillus sp. Y412MC52]
          Length = 273

 Score =  135 bits (339), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 60/273 (21%), Positives = 108/273 (39%), Gaps = 31/273 (11%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S         AL++RL T++ N++N++TVGF+  +  F+E++    + +        
Sbjct: 1   MLRSMLTAANTMNALQERLDTISHNIANSNTVGFKRREASFAELLTQQIDRLPNDEAPRE 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALE-GDAWFALESPRG-----IILTR 102
                +  +        L  + G+ + TG  LDFAL   + WF +          I  TR
Sbjct: 61  TPAGVRYGNGARLASTMLITKQGALVETGRRLDFALTAENQWFRVRLADQSGAETIGYTR 120

Query: 103 DGRFKVTDDGSL--VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG-----KVI 155
            G F +        ++ S    VLD  + PI +P       V   G ++           
Sbjct: 121 AGNFSLAPMNGELALTTSDGLFVLDERNAPIVLPADAHDVQVSPTGTLTATNADGRVVAR 180

Query: 156 ATMGLYSVDMSQGFVRRENSGIS-PNIPPTPLEDL----SGVTVKRGFLEDSNANSMYEM 210
             +G+  +   Q    R  +  + PN+P    E        ++VK+G LE SN +   EM
Sbjct: 181 VNLGVTVIRRPQLLEARGGNVYALPNVPGAAEELNGNLRGQISVKQGALEQSNVDLGEEM 240

Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
             ++  ++ +      I  +E+ +   I  + S
Sbjct: 241 VGLMATSRAYQLNARAISISEQMLG-LINGMRS 272


>gi|168705106|ref|ZP_02737383.1| flagellar basal-body rod protein FlgG [Gemmata obscuriglobus UQM
           2246]
          Length = 261

 Score =  135 bits (339), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 44/251 (17%), Positives = 84/251 (33%), Gaps = 18/251 (7%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID--------- 53
           ++     +   A    L   ++N++N+DT G++T ++ F + +    + +          
Sbjct: 4   SAITSSASGIRAASTYLDVTSNNIANSDTPGYKTGQITFQDQLYRAADPVGAPTTGVTPP 63

Query: 54  ---QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVT 109
              Q  S V           G+ + +    D A++G+ +F +  P      TR G F   
Sbjct: 64  SGTQIGSGVVVDAITGKFTQGAALESTGRFDLAIQGEGFFQVILPDGSTGYTRAGNFVTD 123

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169
           + G LV+  G   V D+                      +   +VI  + L       G 
Sbjct: 124 NTGQLVTPQGYRLVSDLIVPANTSSITVAPDGTVTAALDNGTAQVIGQVTLTRFVNPGGL 183

Query: 170 VRRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224
            R  ++  +                   +V+ G LE SN     E+  +I   Q F   T
Sbjct: 184 SRSGDNVYTATPAAGDAINGAPNTNGIGSVESGRLEQSNVELANELVNLIVAQQAFRFNT 243

Query: 225 TLIDENEKSML 235
             +    + + 
Sbjct: 244 QALQLESQVLQ 254


>gi|262273528|ref|ZP_06051342.1| flagellar basal-body rod protein FlgF [Grimontia hollisae CIP
           101886]
 gi|262222506|gb|EEY73817.1| flagellar basal-body rod protein FlgF [Grimontia hollisae CIP
           101886]
          Length = 243

 Score =  135 bits (339), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 45/242 (18%), Positives = 88/242 (36%), Gaps = 4/242 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       ++    +      +A+N++N +T GFR        V   I+    +  +   
Sbjct: 1   MDKLLFTAVSGATRVITAQQVLANNLANVNTDGFRADIGLAKSV--EIQGKGLETRTLTG 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119
            G  +     G+   T   LD A+ G+ +FA++        TR G F + ++G L+    
Sbjct: 59  IGSTWSDFTPGALKRTDNPLDVAIRGNGFFAVQVGEDGEAYTRAGAFHLNENGDLMLGDR 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                       +  +     +       +    V     L  V      +R+   G+  
Sbjct: 119 PVLGDGGPIAIPEHEKLMIGQDGTISVVTAGSAAVQEVGKLKLVKPEPNQLRKGEDGLFR 178

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
                P++   GVTV  G+LE SN N++  + + I L++ F     ++   E+ +     
Sbjct: 179 TYNGEPVDADQGVTVAVGYLESSNVNAIDALVKNIDLSRNFEFQIKMMKTAEE-LASTGN 237

Query: 240 NI 241
            +
Sbjct: 238 RL 239


>gi|327398889|ref|YP_004339758.1| flagellar hook-basal body protein [Hippea maritima DSM 10411]
 gi|327181518|gb|AEA33699.1| flagellar hook-basal body protein [Hippea maritima DSM 10411]
          Length = 264

 Score =  135 bits (339), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 60/261 (22%), Positives = 105/261 (40%), Gaps = 21/261 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS-----------------E 43
           M +         +   QR++ + +N++N +T GF+   +                    +
Sbjct: 1   MFSGVYDAAGGMVIEMQRVNNITNNIANLNTPGFKKEGINVKSWSRIWGMANANLPIPPD 60

Query: 44  VVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103
              A     + K S       Y+    G    TG +LDFALEG  +F + +P+GI  TR+
Sbjct: 61  TQAAANFINETKNSTPHLDTNYIDFSQGPLRHTGNKLDFALEGKGFFLVLAPKGIQYTRN 120

Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQ--IPQKDEIFNVGEKGEISQKGKVIATMGLY 161
           G+F++  DG L+     YPV+    +     I    +   +   GE+   G  I  + + 
Sbjct: 121 GQFEINKDGILIQRGTGYPVVGENYLINHKLIKITGKTILIKNDGEVYSDGVRIDKLAIR 180

Query: 162 SVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221
                    +  NS  SP    +P+       +K G+LE SN   + EM ++I   + F 
Sbjct: 181 DFANYTNLKKEPNSMFSPINGESPIP-APNTFLKEGYLEMSNVTIVNEMVKLIESQRNFE 239

Query: 222 SITTLIDE-NEKSMLEAIRNI 241
               +ID    + + +  RN+
Sbjct: 240 RYQRVIDSLGNELLSDIARNL 260


>gi|194365679|ref|YP_002028289.1| flagellar basal body rod protein FlgF [Stenotrophomonas maltophilia
           R551-3]
 gi|194348483|gb|ACF51606.1| flagellar basal-body rod protein FlgF [Stenotrophomonas maltophilia
           R551-3]
          Length = 249

 Score =  135 bits (339), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 52/253 (20%), Positives = 90/253 (35%), Gaps = 14/253 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  + +    A  Q   T++ N++N+DT GF+            I+           
Sbjct: 1   MDKALYVAMTGARASLQAQGTLSHNLANSDTPGFKEALANTEAF--PIRGPGFASRVDAL 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119
                 ++  GS   TG  LD +L+   W A   S      TR     VT +G LV++SG
Sbjct: 59  HVDAGFNRTPGSQHITGKPLDLSLQTGTWLAVQSSDGSEAYTRGAALSVTPNGQLVTSSG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172
           +  + D  +         +   +G  G IS   +      +  +          +   R 
Sbjct: 119 RPVLDDNNNPIAI--PPYQAMEIGADGTISIIPQGEGPQTMAQIGRIKVVQAPDERLERG 176

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            +       P  P     G  V  G LE SN ++   + QMI L +++     +I   ++
Sbjct: 177 LDGLFRNTDPLQPFAPAQGTAVHSGQLEGSNVDAAGALVQMIQLQRQYEMQVQVIKHGDE 236

Query: 233 SMLEAIR--NIAS 243
           +   A     + S
Sbjct: 237 NARSANSMLRLGS 249


>gi|295707199|ref|YP_003600274.1| flagellar hook-basal body complex protein FlhO [Bacillus megaterium
           DSM 319]
 gi|294804858|gb|ADF41924.1| flagellar hook-basal body complex protein FlhO [Bacillus megaterium
           DSM 319]
          Length = 274

 Score =  135 bits (339), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 50/274 (18%), Positives = 102/274 (37%), Gaps = 35/274 (12%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIK---VKFSEVVGAIKN------- 50
           M   F    A  L+ +++   + +N++N +T GF+  +     F +++            
Sbjct: 1   MFKGFYTAAAGMLSQQRQTDLLTNNIANANTPGFKADQGTLKAFPDMLLQRMESEDLPTD 60

Query: 51  ---------DIDQKISFVASGKEYLSKEVGSFISTGTELDFALE--------GDAWFALE 93
                    +I    + V   +   S   G    T    + AL         G  +F ++
Sbjct: 61  RSISVQNKKEIGAINTGVYMQETVPSFTQGDLQQTSQSTNIALMEQNMPTKEGGLFFVVQ 120

Query: 94  SPRGII-LTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG 152
           SP      TR+  F +  +G L +++G Y +         I  K E F V  +G +++  
Sbjct: 121 SPDNTPQYTRNSNFTLDQEGFLTTSTGAYVLNTNNQP---IQLKSENFTVDSQGNVTENN 177

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISP----NIPPTPLEDLSGVTVKRGFLEDSNANSMY 208
           + +A + +      Q   +  N          +P           +K+GF+E SN ++  
Sbjct: 178 QQVAQIDIAYASDLQTIKKVGNGLYETLNNQPLPSARNNPGISYQLKQGFVERSNVDAAQ 237

Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            M  ++   + F +   ++   ++SM +A   I 
Sbjct: 238 SMTDLLTAYRAFEANQKIMQAYDRSMDKAANEIG 271


>gi|239995124|ref|ZP_04715648.1| flagellar basal-body rod protein FlgF [Alteromonas macleodii ATCC
           27126]
          Length = 247

 Score =  134 bits (338), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 53/246 (21%), Positives = 91/246 (36%), Gaps = 8/246 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     I  +            A+N++N  T GFR    +   +      +      F  
Sbjct: 1   MDKLLYISASGASQDLLGTGIRANNLANAQTTGFRAQLEQARSM--PAYGEGLPTRVFSM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119
           +     + E G  I T  +LD A++GD WFA  +       +RDG FK+ DDG L     
Sbjct: 59  TESPSNNYESGPMIKTDRDLDVAIQGDGWFAVQDQNGQEAYSRDGNFKLGDDGILTDIHD 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
           +  + D   + + +P  +          + Q G     +        V  +   + R N 
Sbjct: 119 RVVLGDNGPIFLPVPLDNLNIAADGTLSMRQLGAPANVIEEVGRLKLVSPNYADMERGND 178

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
           G+      +     + V V  G LE SN N++ EM  MI L + +     ++ + E+ + 
Sbjct: 179 GLFRMEDGSIAPANANVKVMSGMLEGSNVNAVDEMVDMISLQRHYELQVKMMKQAEE-LD 237

Query: 236 EAIRNI 241
                +
Sbjct: 238 TRGNQL 243


>gi|119899026|ref|YP_934239.1| flagellar basal-body rod protein FlgF [Azoarcus sp. BH72]
 gi|119671439|emb|CAL95352.1| flagellar basal-body rod protein FlgF [Azoarcus sp. BH72]
          Length = 245

 Score =  134 bits (338), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 51/244 (20%), Positives = 92/244 (37%), Gaps = 5/244 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       +        + + V+ N++N  + GFRT   K   V   ++ +     +F  
Sbjct: 1   MDRLIYTAMTGAKGTLDQQAAVSHNLANATSTGFRTEMHKLRAV--EVQTEAMHTRAFTV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
                     G    TG   D A+EG  W  ++ P      TRDG  +++ +G L + SG
Sbjct: 59  DASVATDYSAGPLQFTGRPYDVAVEGKGWLTVQMPDGTEAYTRDGSLELSANGVLQTRSG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT--MGLYSVDMSQGFVRRENSGI 177
              +    +     P  + +          Q G+ +      L  V+  +  + R + G+
Sbjct: 119 LPVLGASGAPIALPPDTEIVIGADGTISSLQAGQNVVNVVDQLKLVNPPEATLVRGDDGL 178

Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                         V V  G+LE SN N + +M  MI L ++F   T ++   E++   A
Sbjct: 179 FRTGDGAAQAADPAVKVAGGYLEGSNVNVVDQMVTMISLARQFEMQTRMLQTAEQNDRAA 238

Query: 238 IRNI 241
            + +
Sbjct: 239 AQVL 242


>gi|251772413|gb|EES52980.1| flagellar basal body rod protein [Leptospirillum ferrodiazotrophum]
          Length = 265

 Score =  134 bits (338), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 48/265 (18%), Positives = 97/265 (36%), Gaps = 28/265 (10%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK----------- 49
           M+ +    ++     EQ +  ++ N++N +T GFR  +V F   +   +           
Sbjct: 1   MRRAEFALVSGAQGQEQMMDVLSSNLANVNTPGFRKDRVMFRSYLPHREYLHRTPPDRPG 60

Query: 50  -------------NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR 96
                              I      + Y+  E G F STG  LD AL G  +  + +P 
Sbjct: 61  FNLTPFGTFPTPWGMAGSDIPHSGVDRIYVRYEEGEFQSTGNPLDVALSGKGFLTVRTPG 120

Query: 97  GIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156
           G +LTR+G   V   G  ++    +P++ +    I +P   +   +   G++    KV+ 
Sbjct: 121 GTLLTRNGHLTVDSQG-RLTTHEGHPLVGVDGKEIHLPSGVDPIRIDSAGKVFSGEKVVG 179

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
            + + +       + +   G+  +             V+ G +E SN     EM +MI  
Sbjct: 180 QLAISAPAGPMEHLTKVGDGLFFSPDGLVK---GEAVVRNGGVEGSNVKGTSEMVRMIQG 236

Query: 217 TQKFNSITTLIDENEKSMLEAIRNI 241
            + + +    +          + ++
Sbjct: 237 MRTYQTDLQALHTLNDLTNRTVNDM 261


>gi|167463161|ref|ZP_02328250.1| flagellar hook-basal body protein [Paenibacillus larvae subsp.
           larvae BRL-230010]
          Length = 275

 Score =  134 bits (338), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 45/275 (16%), Positives = 104/275 (37%), Gaps = 34/275 (12%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S      +   L+Q+L  +A+N++N +TVG++     F E++ ++KN  +       
Sbjct: 1   MNHSMINASVSMNGLQQKLDILANNIANINTVGYKRKDASFQEILKSVKNQPEKFQLPGR 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107
                 Q        +       G   +T   LD  ++GD  F +        T+ G F+
Sbjct: 61  MTPSGLQLGWGARLSQISSDFTQGPVENTQNSLDLMVQGDGMFEILVDGKPYWTKSGSFQ 120

Query: 108 VT----DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ-----KGKVIATM 158
           ++    + G  ++    + V  +   PI +P   +     +   ++      +   +  +
Sbjct: 121 LSVMPGNQGLALTTKDGHYVSGLNGEPIILPPNTQPKIDEQGNVVAYSETGARPVQVGRI 180

Query: 159 GLYSVDMSQGFVRRENSGIS-----------PNIPPTPLEDLSGVTVKRGFLEDSNANSM 207
            +  ++  Q       +  +            +     +++   + V +G+LE SN N  
Sbjct: 181 RVVQIERPQLLEAVGENLYTLKAGIEKGQALRDAAGLTVQEQGKLKVMQGYLEQSNVNLS 240

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            EM ++I++ + F   +  +  ++  M     N+ 
Sbjct: 241 DEMTELINVQRAFQLSSRAVTSSDSMMG-LANNLR 274


>gi|326796596|ref|YP_004314416.1| flagellar basal-body rod protein FlgF [Marinomonas mediterranea
           MMB-1]
 gi|326547360|gb|ADZ92580.1| flagellar basal-body rod protein FlgF [Marinomonas mediterranea
           MMB-1]
          Length = 245

 Score =  134 bits (337), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 50/237 (21%), Positives = 98/237 (41%), Gaps = 6/237 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  + ++    +       A+N++N  T GFR    +   +   +  D      +  
Sbjct: 1   MDRALYLAMSGGTQVMNAQGIHANNLANVATTGFRADFEQARSM--QVNGDYYPSRVYAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +       E G  I TG ++D A++GD + A        + TR G  ++T  G LV+ +G
Sbjct: 59  TENPGTRMERGVMIETGRDMDVAIQGDGFIAAMDATGQEVYTRAGDLQLTSAGQLVTGTG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176
              +     V +       + + G    I Q G    T  +     V+     + + N G
Sbjct: 119 LPVLGSAGPVFLPPLDALHVGSDGTISFIPQGGDATQTTSIGRIKLVNTDGENLTKGNDG 178

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           +       PL++ + + +  GFLE SN N++ EM +++ L ++F     ++D   ++
Sbjct: 179 LLRTKNGLPLDEDNNIKLISGFLEGSNVNAVEEMTEIMELARRFEMNIKVMDSVRQN 235


>gi|121534935|ref|ZP_01666754.1| protein of unknown function DUF1078 domain protein [Thermosinus
           carboxydivorans Nor1]
 gi|121306534|gb|EAX47457.1| protein of unknown function DUF1078 domain protein [Thermosinus
           carboxydivorans Nor1]
          Length = 247

 Score =  134 bits (337), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 45/251 (17%), Positives = 93/251 (37%), Gaps = 15/251 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDI----- 52
           M        +  LA   R    A+N++N +T G++        F+ ++ +  ND      
Sbjct: 1   MIRGIYTAASGMLAEAIRADVTANNLANANTAGYKKDVALSRDFAGILISRINDGPDAPV 60

Query: 53  -DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDD 111
                              G   STG  LD A++G  +F + +P G+  TR+G F    +
Sbjct: 61  IGSLGLGAVVDNVATIHTAGMMRSTGNALDLAIDGRGFFVVATPAGLRYTRNGAFTRNSE 120

Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171
           G LV+ +G   +     V +          +   G +      +  + +      +  V+
Sbjct: 121 GELVTQAGYRVMGQAGPVRL---NSGAKVTIDADGRVFVDEVEVDRLQVVDFPDQRALVK 177

Query: 172 RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
             +S  +               V++G LE +N N + EM  +I   + +     ++  ++
Sbjct: 178 EGDSLFAAPGAAPQAGSG---QVRQGVLELANVNVVAEMVNLIAGYRAYEINAKMVQTHD 234

Query: 232 KSMLEAIRNIA 242
           + + +A+  + 
Sbjct: 235 QLLDKAVNEVG 245


>gi|297531534|ref|YP_003672809.1| fagellar hook-basal body protein [Geobacillus sp. C56-T3]
 gi|297254786|gb|ADI28232.1| fagellar hook-basal body protein [Geobacillus sp. C56-T3]
          Length = 273

 Score =  134 bits (337), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 60/273 (21%), Positives = 107/273 (39%), Gaps = 31/273 (11%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S         AL++RL T++ N++N++TVGF+  +  F+E++    + +        
Sbjct: 1   MLRSMLTAANTMNALQERLDTISHNIANSNTVGFKRREASFAELLTQQIDRLPNDEAPRQ 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALE-GDAWFA-----LESPRGIILTR 102
                +  +        L  + G+ + TG  LDFAL   + WF            I  TR
Sbjct: 61  TPEGVRYGNGARLASTMLITKQGALVETGRRLDFALTAENQWFRVRLADQNGAETIGYTR 120

Query: 103 DGRFKVTDDGSL--VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG-----KVI 155
            G F +        ++ S    VLD  + PI +P       V   G ++           
Sbjct: 121 AGNFSLAPMNGELALTTSDGLFVLDERNAPIVLPADAHDVQVSPTGTLTATNADGRVVAR 180

Query: 156 ATMGLYSVDMSQGFVRRENSGIS-PNIPPTPLEDL----SGVTVKRGFLEDSNANSMYEM 210
             +G+  +   Q    R  +  + PN+P    E        ++VK+G LE SN +   EM
Sbjct: 181 VNLGVTVIRRPQLLEARGGNVYALPNVPGAAEELNGNLRGQISVKQGALEQSNVDLGEEM 240

Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
             ++  ++ +      I  +E+ +   I  + S
Sbjct: 241 VGLMATSRAYQLNARAISISEQMLG-LINGMRS 272


>gi|163782129|ref|ZP_02177128.1| flagellar hook basal-body protein FlgG [Hydrogenivirga sp.
           128-5-R1-1]
 gi|159882661|gb|EDP76166.1| flagellar hook basal-body protein FlgG [Hydrogenivirga sp.
           128-5-R1-1]
          Length = 242

 Score =  134 bits (337), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 49/245 (20%), Positives = 101/245 (41%), Gaps = 20/245 (8%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
             I  +  L  E++L+   +N++N DT  F+   V+ S     +   +        +   
Sbjct: 8   LFILSSGMLLQERKLAVTTNNLANLDTPSFKRDFVEVSSWYTDMGAQVPNLSPENPTNNF 67

Query: 65  YLSKEVGSF--------ISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVS 116
                   F          TG   D A+EG+ +FA+ +P G++ TR G F++  +G LV+
Sbjct: 68  VYPMMTRIFTDLSQGSLRETGNTFDLAIEGEGFFAVRTPEGVMYTRKGNFRLDSEGFLVT 127

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
             G   +         +  + ++     +G +   G  ++T+G++++  +Q       +G
Sbjct: 128 EKGYRVLDRANDEVKVVGNRVDV---DREGNVYVDGIRVSTLGVWALPDAQKVGEDLFTG 184

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                           +V++GF+E SN N + EM ++I  ++   +   LI   ++    
Sbjct: 185 TPQPAEGF--------SVRQGFIELSNVNGIVEMVRLIETSRAHETYARLIQAVDEV-QN 235

Query: 237 AIRNI 241
            +  I
Sbjct: 236 RVNTI 240


>gi|332140547|ref|YP_004426285.1| flagellar basal-body rod protein FlgF [Alteromonas macleodii str.
           'Deep ecotype']
 gi|327550569|gb|AEA97287.1| flagellar basal-body rod protein FlgF [Alteromonas macleodii str.
           'Deep ecotype']
          Length = 247

 Score =  134 bits (337), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 54/241 (22%), Positives = 89/241 (36%), Gaps = 7/241 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     I  +            A+N++N  T GFR    +   +      +      F  
Sbjct: 1   MDKLLYISASGASQDLLGTGIRANNLANAQTTGFRAQLEQARSM--PAYGEGLPTRVFSM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119
           +     + E G  I T  +LD A++GD WFA  +       +RDG FK+ DDG L     
Sbjct: 59  TESPSNNYESGPMIKTDRDLDVAIQGDGWFAVQDQNGQEAYSRDGNFKLGDDGILTDIHD 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
           +  + D   + + +P  +          + Q G     +        V  +   + R N 
Sbjct: 119 RVVLGDNGPIFLPVPLDNLNIAADGTLSMRQLGAPANVIEEVGRLKLVSPNYADMERGND 178

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
           G+      +     + V V  G LE SN N++ EM  MI L + +     ++ + EK   
Sbjct: 179 GLFRMEDGSIAPANANVKVMSGMLEGSNVNAVDEMVDMISLQRHYELQVKMMKQAEKLDQ 238

Query: 236 E 236
            
Sbjct: 239 S 239


>gi|166712061|ref|ZP_02243268.1| flagellar basal body rod protein FlgF [Xanthomonas oryzae pv.
           oryzicola BLS256]
          Length = 251

 Score =  134 bits (337), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 56/245 (22%), Positives = 96/245 (39%), Gaps = 10/245 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  + +    A  Q  STV+ N++N DTVGF+            I+           
Sbjct: 1   MDKALYVAMTGARASLQAQSTVSHNLANVDTVGFKAALANTEAF--KIQGKGYPSRIDAL 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
              +   +  G    TG  LD +L+ D W A++SP      TR+G   +T +  LV+A+G
Sbjct: 59  HVDQGFDRSQGHQKVTGNPLDVSLQQDRWLAVQSPDGSEAYTRNGELALTANSQLVTANG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG----LYSVDMSQGFVRRENS 175
              + +  +     P +           I  +G+   TM     +  VD     + R   
Sbjct: 119 HAVLDEGGNPMTIPPHQAMEIGSDGSISIIPQGEGPQTMAIVGKMKVVDAPADRLTRRPD 178

Query: 176 GISPNIPPTPLEDLSGVT---VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
           G+  N    P +  +  T   +  G LE SN ++   + +MI L ++F     +I   + 
Sbjct: 179 GLMRNTSTDPAQAFAVSTGKTINSGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNGDD 238

Query: 233 SMLEA 237
           +   A
Sbjct: 239 NAQSA 243


>gi|94495410|ref|ZP_01301990.1| flagellar basal-body rod protein [Sphingomonas sp. SKA58]
 gi|94424798|gb|EAT09819.1| flagellar basal-body rod protein [Sphingomonas sp. SKA58]
          Length = 247

 Score =  134 bits (337), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 55/239 (23%), Positives = 92/239 (38%), Gaps = 6/239 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M    N  L A      R +++A+N++N +TVGFR            I+ +     +  +
Sbjct: 1   MDRLVNTALTAMRGAMARQASIANNLANANTVGFRAEIANAET--RWIQGESFDTRAQAS 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASG 119
                     G+   TG  LD AL+GDA   ++ +      TR G  KV+D G L +  G
Sbjct: 59  EQVIAADMAQGAVTETGNPLDVALDGDALLTVQATDGSEAYTRRGDLKVSDSGLLTTGDG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176
              + +   V +       I   G    + Q G       +     V+ +   + + N G
Sbjct: 119 LPVLGEGGPVILPQMDSVSIAKDGSIWGVPQGGDPANPQQVDKLKLVNAAGSSIAKGNDG 178

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
           +   +    L      TV  G LE SN NS   +  MI  ++ + +   +ID  ++   
Sbjct: 179 LFREVNGGALPSDPLATVTSGSLEGSNVNSTQALIDMIEASRAWETQVKMIDTAKQLDD 237


>gi|254499121|ref|ZP_05111811.1| putative flagellar basal body rod protein [Legionella drancourtii
           LLAP12]
 gi|254351660|gb|EET10505.1| putative flagellar basal body rod protein [Legionella drancourtii
           LLAP12]
          Length = 237

 Score =  134 bits (337), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 50/242 (20%), Positives = 100/242 (41%), Gaps = 9/242 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +      A    + +L +++ N+SN +T GF+   ++ +     ++ +++Q      
Sbjct: 1   MFDAITATQLAMDYDQLKLQSISQNISNMNTPGFKRQLIENAGFDMHLQANVNQ---VAQ 57

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
             ++   K  G    T    D AL G+ +F ++  +GI  TR G F+V + G L +A+G+
Sbjct: 58  QLEQSHLKAQGLINQTKNPTDLALCGEGYFQVQGEQGIFYTRRGDFQVNNQGELTTATGE 117

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
             +         I   D  F V  +G +      +  + +      Q      N     +
Sbjct: 118 TVL----GKGGVIKVDDHAFTVDAQGALFIDHHKVDQLNIVQFKQPQLLRYSGNGLYQCD 173

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
               P+   +   V +GF+E SN  S+ EM  M+  ++ F +   ++   +  +  AI  
Sbjct: 174 DS--PIPVGANTQVHQGFIEQSNVKSIDEMMDMVKTSRHFEANQRIMRTADNLLATAINQ 231

Query: 241 IA 242
           + 
Sbjct: 232 LG 233


>gi|330721007|gb|EGG99168.1| Flagellar basal-body rod protein FlgF [gamma proteobacterium
           IMCC2047]
          Length = 246

 Score =  134 bits (337), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 50/237 (21%), Positives = 100/237 (42%), Gaps = 6/237 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  S  I +   +   +  +  A+N++N +T+GFR+   +   +   +  +      +  
Sbjct: 1   MDKSLYIAMTGAVQNARGTAIHANNLANVNTMGFRSDYAQARAM--PVYGETYASRVYAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119
                 +   G+ + TG ELD A+ G+ W A+++P G    TR G  KV   G L + +G
Sbjct: 59  EENPGTNFAYGTLVETGNELDVAVNGEGWIAVQTPDGGEAYTRAGEMKVDSLGILRNGNG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNV---GEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
              +     + +   ++  I        +G  +  G +     +  V+     + + N G
Sbjct: 119 LPVMGQGGPIALPPFERITIGQDGTISIQGAGANPGSLSQVDRIKLVNPDASQLYKGNDG 178

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           +            + V V  GFLE SN NS+  + ++I L+++F     ++   E++
Sbjct: 179 LMRQRDGQAAPADAAVGVSAGFLEGSNVNSVEALTELISLSRQFELHVKMMKTAEEN 235


>gi|296282279|ref|ZP_06860277.1| hypothetical protein CbatJ_01595 [Citromicrobium bathyomarinum
           JL354]
          Length = 269

 Score =  134 bits (337), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 46/265 (17%), Positives = 85/265 (32%), Gaps = 29/265 (10%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG--AIKNDIDQKISFVAS 61
           SF   L      +  L T+A N++N++T GF+  + +F+E+V   A+ N    +    + 
Sbjct: 2   SFYTSLNGLKNAQSSLGTIAHNIANSETYGFKRGRTEFAEIVAGSALSNPRTIQGIGSSV 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASGK 120
                +  +G    TG+ LD A+ GD +F +    G  + TR G F + + G +V   G 
Sbjct: 62  EAITQNFSLGPIEQTGSALDMAITGDGFFTMRGENGGTLYTRAGSFTINESGGIVDNDGN 121

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQ---------------------KGKVIATMG 159
                                       +                        + +  + 
Sbjct: 122 RLQAYAVDANGDPTSNALQDVQIPVTNAAGAEYAGVTVGSDGVIRASYADGSNQPVGMVA 181

Query: 160 LYSVDMSQGFVRRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMI 214
           L +     G     +S                 +     +  G LE SN +   E+  +I
Sbjct: 182 LATFMAPNGLKPVGSSNWESTGFSGAASYGEPGNGQYGALLSGSLERSNVDIAEELVGLI 241

Query: 215 HLTQKFNSITTLIDENEKSMLEAIR 239
              + F +    ID   +     + 
Sbjct: 242 TAQRNFQANAKAIDTATQISQTVMN 266


>gi|325288803|ref|YP_004264984.1| fagellar hook-basal body protein [Syntrophobotulus glycolicus DSM
           8271]
 gi|324964204|gb|ADY54983.1| fagellar hook-basal body protein [Syntrophobotulus glycolicus DSM
           8271]
          Length = 299

 Score =  134 bits (336), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 46/294 (15%), Positives = 92/294 (31%), Gaps = 56/294 (19%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S    ++     +  +  + +N++N +TVG++  +  FS ++               
Sbjct: 1   MMRSLYSAISGLKNEQIAMDVIGNNIANVNTVGYKYSRTGFSTMLSQSMRGASAPDTADP 60

Query: 54  ---------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRD 103
                    Q     A G        G   STG   D  L+G+ +F L+   G +  +R+
Sbjct: 61  STYGGTDGIQIGLGSAIGSIDQIMTQGGSQSTGKNTDLMLQGEGFFMLQDSNGNVYLSRN 120

Query: 104 GRFKVTDDGSLVSASGKYPVLD----------------------------------MASV 129
           G FK    G+LV AS  + V                                      + 
Sbjct: 121 GNFKTDGAGNLVDASTGFIVQGYENDGSDPWDTLANINLAIGRSDPEGGTNTLSSFEINS 180

Query: 130 PIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL 189
              I       +  +          +  + + + +   G     N+    +     ++  
Sbjct: 181 QGIIMGTFTDSDSTDGTTDPAYTVPLYQIAVATCNNPSGLTPVGNNYYQESPNSGEVKIN 240

Query: 190 SGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
                   ++  G LE SN N   +   MI   + F + + +I  ++  + E +
Sbjct: 241 VAGENGNRSISTGCLEMSNVNLSEQFTDMIVTQRGFQANSRVITVSDSMLQELV 294


>gi|213161842|ref|ZP_03347552.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Typhi str. E00-7866]
          Length = 232

 Score =  134 bits (336), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 76/232 (32%), Gaps = 20/232 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M +S  I      A +  +  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           G+   T    D A++G  +F +  P G    TRDG F
Sbjct: 61  TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGTSAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V  +G LV+A G      +      +         V    +       +  + L +   
Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQ 212
             G      +            + +        + +G++E SN N   E+  
Sbjct: 181 DTGLESIGENLYIETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVN 232


>gi|147678401|ref|YP_001212616.1| flagellar basal body rod protein [Pelotomaculum thermopropionicum
           SI]
 gi|146274498|dbj|BAF60247.1| flagellar basal body rod protein [Pelotomaculum thermopropionicum
           SI]
          Length = 256

 Score =  134 bits (336), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 39/256 (15%), Positives = 85/256 (33%), Gaps = 15/256 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA----------IKN 50
           M  + +  +    A   R+  +A +++N    G++  + +F+E+V             + 
Sbjct: 1   MLKALSSAVTGLNAQRTRVDAIAVDLANIAAAGYKRNRTRFAELVSQEIEKQGIPVAAEG 60

Query: 51  DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVT 109
              +  S V +         G  + T    D  +EG+ +F +  P    + TR+G F   
Sbjct: 61  RPARAGSGVRAESADKVLLAGETVKTERPFDLLIEGEGYFRVVLPGGEEVYTRNGCFTYD 120

Query: 110 DDGSLVSASGKY---PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
            +G+L  +SG       L      + +     +    +   I      +      +    
Sbjct: 121 KEGNLYCSSGYRLEGVSLPEGWDKVIVSPDGRVSAEKDGSVIDAGQITLYRFSSMAALKP 180

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
            G         +    P          +++G+LE SN +   E+  +I     +      
Sbjct: 181 AGSFHFYLDEEAGEAIPGTPGSEGFGVIRQGYLETSNVDLTGEITGLIEAQTVYGFNARS 240

Query: 227 IDENEKSMLEAIRNIA 242
           +   ++ M     N+ 
Sbjct: 241 VRIVDE-MWGMANNLR 255


>gi|307293786|ref|ZP_07573630.1| flagellar basal-body rod protein FlgF [Sphingobium chlorophenolicum
           L-1]
 gi|306879937|gb|EFN11154.1| flagellar basal-body rod protein FlgF [Sphingobium chlorophenolicum
           L-1]
          Length = 246

 Score =  134 bits (336), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 55/239 (23%), Positives = 91/239 (38%), Gaps = 6/239 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M    N  L A      R + +++N++N +T GFR            IK D     +  +
Sbjct: 1   MDRLVNTALTAMRGAMARQAAISNNLANVNTTGFRAEIANAET--RWIKGDNLNTRAQAS 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119
                     G+   TG  LD A+ GDA  A+++P G    TR G  KV+D G L +  G
Sbjct: 59  EQVVAADMAQGAVTETGNPLDVAMNGDAMLAVQAPDGGEAYTRRGDLKVSDSGLLTTGDG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176
              + +   + +       I   G    + Q G       +     V      + +   G
Sbjct: 119 LVVLGEGGPITLPQMDSISIARDGSIWGVPQGGDPANPQQVDKLKLVSPVGSSIAKGTDG 178

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
           +   +    L D    +V  G LE SN N+   + QMI  ++ + +   +ID  ++   
Sbjct: 179 LFREVNGGALPDDPLASVTGGSLEGSNVNATSALVQMIEASRAWETQVKMIDTAKQLDD 237


>gi|225158947|ref|ZP_03725259.1| protein of unknown function DUF1078 [Opitutaceae bacterium TAV2]
 gi|224802442|gb|EEG20702.1| protein of unknown function DUF1078 [Opitutaceae bacterium TAV2]
          Length = 261

 Score =  134 bits (336), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 52/260 (20%), Positives = 100/260 (38%), Gaps = 20/260 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV--------KFS---------E 43
           M        A+  ALE+    V  N+S++ T  F+   V        +F           
Sbjct: 1   MNIGIYQNAASLNALERWQDVVTQNISSSQTAAFKRRTVQVTGNYSGEFQLPRPTAFAPA 60

Query: 44  VVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTR 102
             GA  +  D + +        +S   G    T  ELD AL GD +F +    G I+ TR
Sbjct: 61  HPGATGSSGDTRRAVFPLTNINISLTPGEAQPTRGELDIALPGDGFFKVRDASGVILYTR 120

Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLY 161
            G  +++ + +LV+A G   + D  +    +           + G ISQ   +I  +G+ 
Sbjct: 121 AGSLQISPERTLVTAQGMDVLSDADTPIQLETESTTSSLVFNDDGTISQGETIIGRLGIV 180

Query: 162 SVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221
           +               +      P +      V +G++E SN + + EM  +I +++ + 
Sbjct: 181 TFANPTLLTPISGGLFTAPPAAGPQQMDEPG-VIQGYIESSNVSQLREMVDLITISRAYE 239

Query: 222 SITTLIDENEKSMLEAIRNI 241
           +   +I   + ++ + +  +
Sbjct: 240 ANQKMIQSRDDTIGKTLEAL 259


>gi|297183135|gb|ADI19278.1| flagellar basal body rod protein [uncultured delta proteobacterium
           HF0200_39L23]
          Length = 258

 Score =  134 bits (336), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 58/256 (22%), Positives = 109/256 (42%), Gaps = 28/256 (10%)

Query: 9   LAAQLAL-------EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ------- 54
           ++   +L       E+++ TVA+N++N  TVGF+  +  F EV+  ++  + Q       
Sbjct: 1   MSGLTSLVQAGGVLEKKIETVANNLANVSTVGFKEDQPSFREVLSTVQRVVPQSEEENFL 60

Query: 55  -----------KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103
                        S V   +   +   G F  TG ELD +LE + +F + +P+G   TR 
Sbjct: 61  SHEYLDEYVGMDKSAVMVDEIGKNFTTGRFRDTGNELDLSLENEGFFTITTPQGDRYTRA 120

Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
           G FK+   G +V+  G   +     + I+    +    V E G++  +G ++  +     
Sbjct: 121 GNFKLDSQGRMVTQDGFPLLGKKGPIQIK---GNGPIQVDENGQVVVEGTIMDQLKTVRF 177

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223
                  +  N   +P            + V++G LE SN N++ EM +M++ T+ +  +
Sbjct: 178 RNQDQLQKLGNHFYAPIRSDDVPIPSREILVRQGMLEQSNVNTVMEMSRMVNATRSYEMV 237

Query: 224 TTLIDENEKSMLEAIR 239
              I   +    +AI 
Sbjct: 238 QKAIMNLDNIDEKAIS 253


>gi|94500242|ref|ZP_01306775.1| flagellar basal-body rod protein FlgF [Oceanobacter sp. RED65]
 gi|94427541|gb|EAT12518.1| flagellar basal-body rod protein FlgF [Oceanobacter sp. RED65]
          Length = 249

 Score =  134 bits (336), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 93/246 (37%), Gaps = 9/246 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  I ++         +  A+N++N  T GFR    +   +   +  D     ++  
Sbjct: 1   MDRALYIAMSGAKQNTLGQTAEANNLANVSTTGFRRDFEQARSM--PVFGDYYPTRAYAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASG 119
             +       G  + TG +LD A++   WFA+ ++      TR G F+V   G LV+   
Sbjct: 59  EERPASDFNPGPLVETGNDLDLAIDNQGWFAVLDANGNEAYTRRGDFQVDGLGRLVNGQN 118

Query: 120 KYPV---LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           +  +     +   P +  Q      V  +G   +   +     +  V+     + +   G
Sbjct: 119 QQLIGAGGPIVLPPYEKVQIAADGTVSIQGVGEEPAVIAGIEQIKLVNPDLTQMEKGEDG 178

Query: 177 ISPNIPPTP---LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           +       P         V V  G++E SN ++++ + Q++ L +++     ++   +++
Sbjct: 179 LFRLRDAEPGAIQPADPTVQVASGYVEGSNVSAVHSLTQIMSLHRQYEMQVKMMSTADEN 238

Query: 234 MLEAIR 239
                 
Sbjct: 239 AQTTAS 244


>gi|58039418|ref|YP_191382.1| flagellar basal-body rod protein FlgF [Gluconobacter oxydans 621H]
 gi|58001832|gb|AAW60726.1| Flagellar basal-body rod protein FlgF [Gluconobacter oxydans 621H]
          Length = 246

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 66/245 (26%), Positives = 109/245 (44%), Gaps = 8/245 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56
           M+ S  I L+   A ++ +S VA NMSN  TVG++   V FS+ +         +     
Sbjct: 1   MENSTYIALSRMDAQQRAMSVVAANMSNASTVGYKRENVLFSDFLSHQHGSKQPEGADTE 60

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVS 116
           S+      Y   + G   STG  LD AL G+ +F + +  G+ LTR GRF+   DG++V 
Sbjct: 61  SYTQDRATYRDFQQGDMQSTGNPLDLALGGEGYFQVRTANGVRLTRAGRFEEQQDGAIVD 120

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
            +G    LD    PI++PQ D    +   G IS +      +G+ +   +       +  
Sbjct: 121 ENGNAL-LDRDGQPIELPQTDHRITISADGVISTETGEQGQIGIVTAQDNNRLQAEGSRL 179

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           +  +    P   +    + +G +E SN   M E+ QM+ + + F+ +   +D        
Sbjct: 180 LRSD---QPTTAVERPNIVQGMVEGSNVQMMTEVTQMMEIQRNFDFMAQFVDAEATRQKN 236

Query: 237 AIRNI 241
           AI  I
Sbjct: 237 AIDKI 241


>gi|196249721|ref|ZP_03148417.1| protein of unknown function DUF1078 domain protein [Geobacillus sp.
           G11MC16]
 gi|196210597|gb|EDY05360.1| protein of unknown function DUF1078 domain protein [Geobacillus sp.
           G11MC16]
          Length = 273

 Score =  133 bits (335), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 59/273 (21%), Positives = 106/273 (38%), Gaps = 31/273 (11%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S +       AL+QRL T++ N++N++T GF+  +  F+E++    + +        
Sbjct: 1   MLRSMHTAANTMNALQQRLDTLSHNIANSNTTGFKRREASFAELLTQQVDHLPDDEAPRQ 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFAL-EGDAWFALESPR-----GIILTR 102
                +  +        L    G    TG  LDFA    + WF +          I  TR
Sbjct: 61  TPAGMRYGNGAGLASTMLVTAQGPLTETGRALDFAFAAANQWFRVRVTDGNGVATIGYTR 120

Query: 103 DGRFKVTDDGSLVS--ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
            G F +T  G  ++   S   PVLD  + PI++P     F +   G ++        +  
Sbjct: 121 AGNFSLTPIGGRLALVTSDGRPVLDETNAPIELPAHATDFQLSPTGTLTATDANGVVVAR 180

Query: 161 YSVD-----MSQGFVRRENSGIS-PNIPPTPLEDLSGVT----VKRGFLEDSNANSMYEM 210
            ++        Q      ++  + P  P    E    +     +K+G LE SN +   E+
Sbjct: 181 VNLGVTVIRRPQLLEALGDNFFTLPTAPGATQELNGNLRSQIAMKQGALEQSNVDLGEEL 240

Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
             ++  T+ +      I  +E+ +   I N+ S
Sbjct: 241 IGLMATTRAYQLNARAISISEQMLG-LINNLRS 272


>gi|238923132|ref|YP_002936645.1| flagellar basal body and hook protein [Eubacterium rectale ATCC
           33656]
 gi|238874804|gb|ACR74511.1| flagellar basal body and hook protein [Eubacterium rectale ATCC
           33656]
 gi|291523979|emb|CBK89566.1| fagellar hook-basal body proteins [Eubacterium rectale DSM 17629]
          Length = 266

 Score =  133 bits (335), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 59/266 (22%), Positives = 109/266 (40%), Gaps = 26/266 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVV---------GAI 48
           M           +   +R+  +A+N++N+DT GF+        F   +           +
Sbjct: 1   MVKGLYTAHTGMVNEMKRMDVLANNLANSDTYGFKKEGTTSHSFKNELAIKIKDTSNYGL 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-----PRGIILTRD 103
             ++      V  G+ Y   + GSF  T    D A+ G  +FA+          +  TRD
Sbjct: 61  HKNLGSMTYGVHLGETYTDWDEGSFKVTDNPTDLAIGGKGFFAVAFTDKSGQTSVKYTRD 120

Query: 104 GRFKVTDDGSLVSASGKYP-------VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156
           G FKV  DG LV+A G +          D           +E F+V   G I+Q  +++ 
Sbjct: 121 GAFKVNADGYLVTADGDHVLNATGALSGDGGEANWVKVDPNEKFSVNSLGYITQNNQLVG 180

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
           T+G+  VD      +   +  +       +   +   +++G LE SN N + EM  MI +
Sbjct: 181 TIGVVDVDNYDYIEKYGENLYNLTAGGNIIASDAE--IEQGALETSNVNVVNEMVNMITI 238

Query: 217 TQKFNSITTLIDENEKSMLEAIRNIA 242
            + + +   +I   ++++ +A+ N+ 
Sbjct: 239 QRAYEAGQKVITSIDETLDKAVNNVG 264


>gi|258404726|ref|YP_003197468.1| fagellar hook-basal body protein [Desulfohalobium retbaense DSM
           5692]
 gi|257796953|gb|ACV67890.1| fagellar hook-basal body protein [Desulfohalobium retbaense DSM
           5692]
          Length = 243

 Score =  133 bits (335), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 49/241 (20%), Positives = 93/241 (38%), Gaps = 6/241 (2%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV-GAIKNDIDQKISFVAS 61
           +     L+       RL  +++N++N D  GF+  ++ F   +  A      +  S +  
Sbjct: 5   SGLAAPLSGAALERTRLQVLSNNLANIDNAGFKQDRLLFETQLDNAQAGRTGEGTSRLQM 64

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
              +     G    TG  LD A++G  +F + +  G   TR G F +  DG+LV+ +G+ 
Sbjct: 65  TSTHTDFSQGGLQHTGRPLDLAIKGGGFFKVATDDGFAYTRHGSFVLQPDGALVTPTGEQ 124

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
            V +   V +              GE    G     + LY+VD  Q   ++  +      
Sbjct: 125 VVGETGPVNLTDSNVRISEEGSVFGE---NGVEQGQLDLYTVDDLQQLEKQGANLWRRP- 180

Query: 182 PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
                  ++  T+ +G LE SN +++    ++I   + F S    I   +    +    +
Sbjct: 181 EGVSERVVAESTLHQGQLESSNVSAIEMTTELIQAERGFQSFQKAIKAYDTVAQKT-NTV 239

Query: 242 A 242
            
Sbjct: 240 G 240


>gi|95929873|ref|ZP_01312614.1| flagellar basal body rod protein [Desulfuromonas acetoxidans DSM
           684]
 gi|95134169|gb|EAT15827.1| flagellar basal body rod protein [Desulfuromonas acetoxidans DSM
           684]
          Length = 242

 Score =  133 bits (335), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 53/246 (21%), Positives = 104/246 (42%), Gaps = 8/246 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV-GAIKNDIDQKISFV 59
           M +     L+  +A  Q +  V +N+SN +T+G++  +V+FS V+  A +N     +++ 
Sbjct: 1   MSSGIYATLSGAVARMQTVDVVTNNLSNANTLGYKKDRVQFSAVLDSAKQNQQAGGVNYS 60

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG--IILTRDGRFKVTDDGSLVSA 117
                      G  I T  E D A+ G+ +F + +P    I  TR G      DG+L++ 
Sbjct: 61  YVEVAKTDYSQGVLIDTRNEYDVAINGNGFFKVRNPDDGEIYFTRLGALDREPDGTLITR 120

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177
           +G++ +         I   +  F + E+G I     V+  + L         +++ N   
Sbjct: 121 TGEFVLSP---ANETIVLPEGDFVIDERGRILGNEGVVDELALVD-PDPDLLIKQGNGRY 176

Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
           S +     + + +   V +G LE SN  ++ E   M+   + F +    +     ++   
Sbjct: 177 SYDGDMRVVPNSTDSQVMQGHLEQSNVKAIEETTLMMTSLRAFENYQKAMKNYF-TLESK 235

Query: 238 IRNIAS 243
           +  I S
Sbjct: 236 VNEIGS 241


>gi|257095358|ref|YP_003168999.1| flagellar basal-body rod protein FlgF [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257047882|gb|ACV37070.1| flagellar basal-body rod protein FlgF [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 249

 Score =  133 bits (335), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 55/247 (22%), Positives = 95/247 (38%), Gaps = 8/247 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       ++         + VA N++N  TVG+R ++ +F  V   I        +F  
Sbjct: 1   MDRLIYTAMSGAKQGLLLQAGVAQNLANATTVGYRAMENRFRAV--PILGSGLATRAFAV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
                   + G+  STG  LD A+ G  W A++ P      TR G  K   +G L ++SG
Sbjct: 59  DASVANVFQEGALTSTGRPLDVAVRGQGWIAVQGPDGREAYTRAGNLKADANGVLQTSSG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG-----KVIATMGLYSVDMSQGFVRREN 174
              + +   + +       I   G    I + G      V     +  V+  +  + R +
Sbjct: 119 LDVLGEGGPIALPPDNNIAIAADGTVSAIPRLGAGAINNVNVVGRIKLVNPPESDLVRGD 178

Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
            G+       P      VT+    LE SN NS+  M +MI L ++F     ++   + + 
Sbjct: 179 DGLFRTRDGVPAVADETVTLAPEALEGSNVNSVDAMVRMISLARQFEMQIKMLQTADGNA 238

Query: 235 LEAIRNI 241
             A + +
Sbjct: 239 RAATQLL 245


>gi|114320058|ref|YP_741741.1| flagellar basal-body rod protein FlgF [Alkalilimnicola ehrlichii
           MLHE-1]
 gi|114226452|gb|ABI56251.1| flagellar basal-body rod protein FlgF [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 246

 Score =  133 bits (335), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 47/246 (19%), Positives = 94/246 (38%), Gaps = 6/246 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + +       +       N++N DT GFR        +   ++       ++  
Sbjct: 1   MDRLVYLAMTGAKHTLEAQQHNNHNLANVDTPGFRADLDAL--MSAPVRGPGHDARAYSE 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119
           +         G  + TG  LD A++GD W A+++P G    TR G  ++ D G L +  G
Sbjct: 59  ALTVGSDFRQGGIVQTGRALDVAIDGDGWLAVQAPDGGEAYTRRGDLQIADGGLLTTGDG 118

Query: 120 KYPVL---DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
              +     +A  P    +      +          + +    L  VD +   +R++N G
Sbjct: 119 HLVMGEAGPVAIPPADEIEIGADGTLSIIPAGQNPDQWVELDRLKLVDPALQDLRKDNDG 178

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           +   +     E  +GV +  G  E SN N +  + +MI   ++F +   ++   E++   
Sbjct: 179 LFRLVDGGEAEADAGVRLVSGAYEGSNVNMVDALVKMIDHARQFETYVKMMTAAEENDQT 238

Query: 237 AIRNIA 242
           + + + 
Sbjct: 239 SAQLLR 244


>gi|54307271|ref|YP_128291.1| FlgF flagellar basal-body rod protein [Photobacterium profundum
           SS9]
 gi|46911691|emb|CAG18489.1| Hypothetical FlgF flagellar basal-body rod protein [Photobacterium
           profundum SS9]
          Length = 244

 Score =  133 bits (334), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 49/243 (20%), Positives = 86/243 (35%), Gaps = 5/243 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       ++    +       A+N++N +T GFR    +   V  A+K +  +  + VA
Sbjct: 1   MDKMLFTAMSGASRVMMAQQVHANNLANVNTAGFRADIEQAESV--AVKGNGFETRTLVA 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119
           +         G+   T    D A+ GD +FA+E+       TR G F +  +G+L+    
Sbjct: 59  ARAGGTDFSHGALQHTDNPFDMAIRGDGFFAVEAGDNDEAYTRTGNFHLDAEGTLLLGDR 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS-QGFVRRENSGIS 178
                    V  +  Q D   +            V     L  V        + E+    
Sbjct: 119 PVLSTGGPIVIPEYQQLDIGADGTISIVPLGSSLVQEVGQLKLVKPDLANLHKSEDGLFR 178

Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
                   E    VTV  G++E SN N++  M   + L++ F     ++   E  +  A 
Sbjct: 179 VAGQGGQAEADENVTVASGYIETSNVNAVESMINNMSLSRNFEFQIKMMKTAED-LASAG 237

Query: 239 RNI 241
             +
Sbjct: 238 NRL 240


>gi|149375033|ref|ZP_01892806.1| Flagellar basal body rod protein [Marinobacter algicola DG893]
 gi|149360922|gb|EDM49373.1| Flagellar basal body rod protein [Marinobacter algicola DG893]
          Length = 250

 Score =  133 bits (334), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 45/252 (17%), Positives = 102/252 (40%), Gaps = 13/252 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  +G++            A+N++N  T GF+    +   +   +  +     ++  
Sbjct: 1   MDKALYLGMSGAKQNMLSQRAHANNLANVSTTGFKADFAQARSM--PVFGEHHPTRAYAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           + +       G+ + TG +LD A+EGD W A+++ +   + TR G  ++  +G +  +SG
Sbjct: 59  AERPGTDLSAGALMDTGRKLDVAVEGDGWLAVQNQQGEEVFTRSGSMQIDVNGLMRLSSG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV---IATMGLYSVDMSQGFVRRENSG 176
           +  + +   V +      +I   G    +   G     +    L  V+  +  + +   G
Sbjct: 119 EMVMGNGGPVALPPFDNVQIGADGTISVVPVGGPPDQLVEVDRLKLVNPPRDALEKGVDG 178

Query: 177 ISP----NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
                       P    + + V  GFLE SN N++ EM   + L++++     ++    +
Sbjct: 179 FIRRKADQALDGPEPPDATMRVASGFLESSNVNAVEEMISNLQLSRQYEMQVKIMTTANE 238

Query: 233 SML---EAIRNI 241
           +       ++N+
Sbjct: 239 NAEASARLLQNL 250


>gi|304310886|ref|YP_003810484.1| Flagellar basal body rod protein [gamma proteobacterium HdN1]
 gi|301796619|emb|CBL44831.1| Flagellar basal body rod protein [gamma proteobacterium HdN1]
          Length = 245

 Score =  133 bits (334), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 44/247 (17%), Positives = 96/247 (38%), Gaps = 6/247 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     I +           T A+N++N  T GF+    ++  +   +         +  
Sbjct: 1   MDKGLYISMTGAREALLSQDTHANNLANASTTGFKADYQQYRSM--QVFGSYYPSRVYAQ 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASG 119
           + +       G++++TG  LD A+ G  W A+ ++      TR G  +   +G+LV+ SG
Sbjct: 59  TERPGTDMRGGNYMTTGRNLDVAVRGKGWIAVLDAEGKEAFTRAGDLERDLNGTLVTGSG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176
              + +   + +   QK E+   G     +     +  + +     V+     + +   G
Sbjct: 119 LAVMGNDGPIVLPEYQKIEVGMDGSISVRALGEDALGMVEVNRIRLVNPDPKALEKGEDG 178

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           +      +  E  + V +  G LE SN N + E+  +I  ++       ++   +++   
Sbjct: 179 LFRMRDGSEPEASAEVALANGMLESSNVNPVSELTSVITSSRLMELNVKMLATYKENDQV 238

Query: 237 AIRNIAS 243
           A R + +
Sbjct: 239 AARILQA 245


>gi|189426344|ref|YP_001953521.1| hypothetical protein Glov_3295 [Geobacter lovleyi SZ]
 gi|189422603|gb|ACD97001.1| protein of unknown function DUF1078 domain protein [Geobacter
           lovleyi SZ]
          Length = 296

 Score =  133 bits (334), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 46/288 (15%), Positives = 92/288 (31%), Gaps = 52/288 (18%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +   G++  LA  + L+ + +N+SN++T+GF+  ++ FS+++ A   +  Q    V   K
Sbjct: 6   AMFTGVSGLLANAEGLNVIGNNLSNSNTIGFKGGRMLFSDLLSAPIGNNSQVGRGVQIQK 65

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESP----------RGIILTRDGRFKVTDDGS 113
                  GS  ST    D A++GD +F+   P               +R G  ++  +  
Sbjct: 66  VDNLFSQGSLESTTVVTDLAIQGDKFFSFAVPGTTAAAAIAVTDAYYSRAGALRIDSNNR 125

Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM--------------- 158
            +     Y  LD    P+         +          G                     
Sbjct: 126 SLINPDGYVALDENRQPVVFVSTYTDTSGNVLDFQKVAGVDAQGRLQLLYADNNGNSSKV 185

Query: 159 -------------------GLYSVDMSQGFVRRENSGISPN--------IPPTPLEDLSG 191
                              G   +    G  +  ++              P     + + 
Sbjct: 186 YYAGNGVVPVPTTTGAIGLGTARIPNPPGLEKVGSTLFKSTGNAVGGSGTPIVTRSNGTN 245

Query: 192 VTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             +    LE SN +   EM +MI   + +++ +  I   ++   E + 
Sbjct: 246 EKILSNNLELSNVDMATEMVKMILTQRAYSANSKTITTADEMTQEVLN 293


>gi|285018208|ref|YP_003375919.1| flagellar basal-body rod protein flgf [Xanthomonas albilineans GPE
           PC73]
 gi|283473426|emb|CBA15931.1| probable flagellar basal-body rod protein flgf [Xanthomonas
           albilineans]
          Length = 251

 Score =  133 bits (333), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 53/247 (21%), Positives = 92/247 (37%), Gaps = 14/247 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  + +    A  Q   TV+ N++N +T GF+            I+           
Sbjct: 1   MDKALYVAMTGARASLQAQGTVSHNLANVETAGFKAQLANTEAF--RIQGSGYPSRIDAL 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119
              +   ++VG+   TG  LD +L  + W A   S      TR G   +T +G LV+ASG
Sbjct: 59  HIDQGFDRDVGAQQVTGNPLDVSLVANNWLAVQTSDGKEAYTRGGELALTANGQLVTASG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS------VDMSQGFVRRE 173
           +  +    +         +   +G  G +S          + +      V      + R 
Sbjct: 119 RAVLDTEGNPMSI--PPHQSLEIGNDGTVSIVPLGEGPQAMSAIGTLKVVTAPADQLTRR 176

Query: 174 NSGISPNIPPTPLEDLSGVT---VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
             G+  NI   P +     T   +  G LE SN ++   + QMI L ++F     +I   
Sbjct: 177 PDGLMRNISEDPTKAFPLATGTALHTGALEGSNVDAAGALVQMIQLQRQFEMQVKVIKNG 236

Query: 231 EKSMLEA 237
           +++   A
Sbjct: 237 DENAQSA 243


>gi|294013087|ref|YP_003546547.1| flagellar basal-body rod protein FlgF [Sphingobium japonicum UT26S]
 gi|292676417|dbj|BAI97935.1| flagellar basal-body rod protein FlgF [Sphingobium japonicum UT26S]
          Length = 246

 Score =  133 bits (333), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 56/239 (23%), Positives = 91/239 (38%), Gaps = 6/239 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M    N  L A      R + +++N++N +T GFR            IK D     +  +
Sbjct: 1   MDRLVNTALTAMRGAMARQAAISNNLANVNTTGFRAEIANAET--RWIKGDNLNTRAQAS 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119
                     G+   TG  LD A+ GDA  A+++P G    TR G  KV+D G L +  G
Sbjct: 59  EQVIAADMAQGAINETGNPLDVAMNGDAMLAVQAPDGGEAYTRRGDLKVSDSGLLTTGDG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176
              + +   + +       I   G    + Q G       +     V+     + +   G
Sbjct: 119 LVVLGEGGPITLPQMDSVSIAKDGSIWGVPQGGDPANPQQVDKLKLVNPVGSSIAKGTDG 178

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
           +        L D    TV  G LE SN N+   + QMI  ++ + +   +ID  ++   
Sbjct: 179 LFREANGGVLPDDPIATVTGGSLEGSNVNATSALVQMIEASRAWETQIKMIDTAKQLDD 237


>gi|254496888|ref|ZP_05109736.1| flagellar basal body rod protein FlgF [Legionella drancourtii
           LLAP12]
 gi|254353907|gb|EET12594.1| flagellar basal body rod protein FlgF [Legionella drancourtii
           LLAP12]
          Length = 247

 Score =  133 bits (333), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 51/245 (20%), Positives = 86/245 (35%), Gaps = 4/245 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M            A   R   +A+N++N  T GFRT   +   +            SFV 
Sbjct: 1   MDPILYNAAGGGRANFSRQEIIANNLANAATPGFRTDLYQAQTMYAQAAGSNSSGNSFVV 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
                     G  I+TG  LD A+ G+ W A+         T+ G   V  +G LV+ASG
Sbjct: 61  QNTNSFDLSGGDLITTGRNLDIAINGNGWLAVRDSTGKEAYTKTGSLHVDANGQLVTASG 120

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEIS---QKGKVIATMGLYSVDMSQGFVRRENSG 176
           K  + +   + I   Q  +I   G    +              +  V + +  + +   G
Sbjct: 121 KAVIGNGGPISIPPAQSIDIGTDGTISIVPLGDTAQSPAVVDRVKMVSLPKDNIVKNADG 180

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           +            S + +  G LE SN   + +M  MI   + F +   L+     +  +
Sbjct: 181 LFQLKTGGVAPFDSNIRLISGALEGSNVQPVEQMVAMITAGRDFETHMNLMSTVSDNSQK 240

Query: 237 AIRNI 241
             + +
Sbjct: 241 LAQIL 245


>gi|255099438|ref|ZP_05328415.1| flagellar basal body rod protein FlgG [Clostridium difficile
           QCD-63q42]
 gi|255305296|ref|ZP_05349468.1| flagellar basal body rod protein FlgG [Clostridium difficile ATCC
           43255]
          Length = 257

 Score =  133 bits (333), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 41/259 (15%), Positives = 102/259 (39%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51
           M       ++A +  +Q+ + V +N++N DT G+++ ++    F E+     N+      
Sbjct: 1   MIRGLYTAVSAMITNQQKQNVVVNNLANMDTNGYKSKQLLTKSFDELKLEGYNNYANGTK 60

Query: 52  ----IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
               I      ++  +   +   G   +T  ++D A++G  +F +         TR+G F
Sbjct: 61  QKQIIGDISPGISMDETITNFNQGPIKTTDNKMDVAIQGKGFFLVSDAAGNQFYTRNGNF 120

Query: 107 KVTDDGSLVSASGKYPVLDMA--SVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
           +  + G L+++ G Y +           I   ++ F V +   IS  G  +    +   +
Sbjct: 121 RTDNQGDLITSEGYYVLGTNTATGAVGHINVGNQKFEVAKDNTISLDGNAMYKFNIVDFN 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224
                 +  ++             ++     +  +E SN + + E+  M+ +++++ +  
Sbjct: 181 NYNNLKKEGDNLY----SGGGAMKVNNALTIQSAIESSNVDMVSEINNMMTISREYEANQ 236

Query: 225 TLIDENEKSMLEAIRNIAS 243
            +I   +  + +    I S
Sbjct: 237 KIIQAMDSKLAKIASEIGS 255


>gi|157373206|ref|YP_001471806.1| flagellar basal-body rod protein FlgF [Shewanella sediminis
           HAW-EB3]
 gi|157315580|gb|ABV34678.1| flagellar basal-body rod protein FlgF [Shewanella sediminis
           HAW-EB3]
          Length = 244

 Score =  133 bits (333), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 44/242 (18%), Positives = 96/242 (39%), Gaps = 3/242 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M        A    + +  +  A+N++N +T GF+    + +  V     +  Q      
Sbjct: 1   MDKMLYTAAAGAARVMEAQAIRANNLANAETTGFKADLERVNATVIPAMGNTLQTRVMAQ 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           +     S + G+   TG  LD A+     F++ + +G   TR G      +G  ++  G+
Sbjct: 61  TQSSGFSHQSGALNPTGRTLDLAIREQGLFSVMTEQGEAYTRSGTLVPDTNG-QLTIDGR 119

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ-GFVRRENSGISP 179
                   + +   ++  + + G    ++ +G +   +G   +   +   + +   G+  
Sbjct: 120 PVAGIDGPIVLPEYRELFVGDDGRISVLAAEGGITEEVGQLKLVNPELDTMEKGLDGLFY 179

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +    PL+    V V  GFLE SN  ++ E+   + L+++F     L+    + + EA  
Sbjct: 180 SRDGQPLQANEQVKVDSGFLESSNVKAVSELIASMDLSRQFEVQVKLMKSA-EKLAEAGN 238

Query: 240 NI 241
            +
Sbjct: 239 RL 240


>gi|126697840|ref|YP_001086737.1| flagellar basal body rod protein FlgG [Clostridium difficile 630]
 gi|115249277|emb|CAJ67090.1| Flagellar hook-basal body complex protein FlgG1 [Clostridium
           difficile]
          Length = 257

 Score =  133 bits (333), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 103/259 (39%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51
           M     I ++A +  +Q+ + V +N++N DT G+++ ++    F E+     N+      
Sbjct: 1   MIRGLYIAVSAMITNQQKQNVVVNNLANMDTNGYKSKQLLTKSFDELKLEGYNNYANGTK 60

Query: 52  ----IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
               I      ++  +   +   G   +T  ++D A++G  +F +         TR+G F
Sbjct: 61  QKQIIGDISPGISMDETITNFNQGPIKTTDNKMDVAIQGKGFFLVSDAAGNQFYTRNGNF 120

Query: 107 KVTDDGSLVSASGKYPVLDMA--SVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
           +  + G L+++ G Y +           I   ++ F V +   IS  G  +    +   +
Sbjct: 121 RTDNQGDLITSEGYYVLGTNTATGAVGHINVGNQKFEVAKDNTISLDGNAMYKFNIVDFN 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224
                 +  ++             ++     +  +E SN + + E+  M+ +++++ +  
Sbjct: 181 NYNNLKKEGDNLY----SGGGAMKVNNALTIQSAIESSNVDMVSEINNMMTISREYEANQ 236

Query: 225 TLIDENEKSMLEAIRNIAS 243
            +I   +  + +    I S
Sbjct: 237 KIIQAMDSKLAKIASEIGS 255


>gi|255523696|ref|ZP_05390662.1| protein of unknown function DUF1078 domain protein [Clostridium
           carboxidivorans P7]
 gi|296186699|ref|ZP_06855101.1| flagellar hook-basal body protein [Clostridium carboxidivorans P7]
 gi|255512565|gb|EET88839.1| protein of unknown function DUF1078 domain protein [Clostridium
           carboxidivorans P7]
 gi|296048736|gb|EFG88168.1| flagellar hook-basal body protein [Clostridium carboxidivorans P7]
          Length = 338

 Score =  132 bits (332), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 46/335 (13%), Positives = 91/335 (27%), Gaps = 96/335 (28%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G++     +++L  + +N++N+ T  ++T + +F ++V               
Sbjct: 1   MLPSMFSGISGLKVNQRKLDVIGNNIANSSTTAYKTQRARFEDMVSQSMASATGASSKLG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF------------------ 90
             +  Q    V       S   GS   T   LD A++GD +F                  
Sbjct: 61  GTNPRQVGLGVQLAGIDTSTGQGSMQPTSAPLDVAIDGDGYFIVGTGAVPEDSGTVQITV 120

Query: 91  -------ALESPRGIILTRDGRFKVTDDGSLVSASGKYP--------------------- 122
                            TRDG F +   G+L+++ G                        
Sbjct: 121 TDDEKHTMSPDGVTTSFTRDGSFTLDTQGNLLTSDGLRVYGYANSKVSITYSKDPKVACT 180

Query: 123 ---------------------------VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI 155
                                       L       +I       +      +     V+
Sbjct: 181 GTYDANAEGGADTEMNAEGLVPLVIPEYLTAGDKNHRIKSYSIGSDGTITATLDSGTAVL 240

Query: 156 ATMGLYSVDMSQGFVRRENSGIS-PNIPPTP----------LEDLSGVTVKRGFLEDSNA 204
             + + S     G  +   +          P              +    ++G LE SN 
Sbjct: 241 GQIAMASFKNPAGLSKLGKNLYQISPNSGDPVVRSTSTSSDDNSAAYGDARQGMLEMSNV 300

Query: 205 NSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +   E   MI   + F +   +I   ++ + + + 
Sbjct: 301 DLAEEFTNMIIANRAFQANGKIITTGDEILQDLVN 335


>gi|237751806|ref|ZP_04582286.1| flagellar distal rod protein FlgG [Helicobacter bilis ATCC 43879]
 gi|229373172|gb|EEO23563.1| flagellar distal rod protein FlgG [Helicobacter bilis ATCC 43879]
          Length = 285

 Score =  132 bits (332), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 60/283 (21%), Positives = 112/283 (39%), Gaps = 40/283 (14%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           MQT +       +    RL  +++N++N +T GF+   V   + +  ++   D       
Sbjct: 1   MQTGYYGATGGMITQFNRLDVISNNLANLNTNGFKRDDVVIGDFLRMVQGHQDTLPIPDE 60

Query: 61  SG-----------------KEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTR 102
           +                  +EY    VG+   T   LDFAL+  + +FA+++P GI  TR
Sbjct: 61  TKAAAKFINRTMTRVPTIAEEYTDFSVGAMEQTENTLDFALKAPNTFFAVQTPNGIAYTR 120

Query: 103 DGRFKVTDDGSLVSASGKYP-----------VLDMASVPIQIPQKDEIFNVGEKGEISQK 151
           +G F ++DDG LV+  G +            +L  A++ I +     +       E    
Sbjct: 121 NGSFSISDDGYLVTQEGFHVLSRDGIDNEGGILMNANMQINVDTNGNVSFKELGNEGMAD 180

Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL----------SGVTVKRGFLED 201
                ++ + + D  +   +   S            D           +   V +GFLE 
Sbjct: 181 NIAGGSLAIVTFDNPKFLKKIGGSLYIEERKEPDNTDSEGLAGANLVYNSGAVTQGFLEK 240

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDEN-EKSMLEAIRNIAS 243
           SN N++ EM  MI   +  +  + ++  + ++   EAI  +A+
Sbjct: 241 SNVNAVLEMTGMIETNRLVDMYSRVMKTHMDELNAEAINKLAA 283


>gi|254973935|ref|ZP_05270407.1| flagellar basal body rod protein FlgG [Clostridium difficile
           QCD-66c26]
 gi|255091321|ref|ZP_05320799.1| flagellar basal body rod protein FlgG [Clostridium difficile CIP
           107932]
 gi|255312979|ref|ZP_05354562.1| flagellar basal body rod protein FlgG [Clostridium difficile
           QCD-76w55]
 gi|255515738|ref|ZP_05383414.1| flagellar basal body rod protein FlgG [Clostridium difficile
           QCD-97b34]
 gi|255648832|ref|ZP_05395734.1| flagellar basal body rod protein FlgG [Clostridium difficile
           QCD-37x79]
 gi|260682049|ref|YP_003213334.1| flagellar basal body rod protein FlgG [Clostridium difficile CD196]
 gi|260685647|ref|YP_003216780.1| flagellar basal body rod protein FlgG [Clostridium difficile
           R20291]
 gi|306518946|ref|ZP_07405293.1| flagellar basal body rod protein FlgG [Clostridium difficile
           QCD-32g58]
 gi|260208212|emb|CBA60569.1| flagellar basal-body rod protein FlgG [Clostridium difficile CD196]
 gi|260211663|emb|CBE01931.1| flagellar basal-body rod protein FlgG [Clostridium difficile
           R20291]
          Length = 257

 Score =  132 bits (332), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 41/259 (15%), Positives = 102/259 (39%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51
           M       ++A +  +Q+ + V +N++N DT G+++ ++    F E+     N+      
Sbjct: 1   MIRGLYTAVSAMITNQQKQNVVVNNLANMDTNGYKSKQLLTKSFDELKLEGYNNYANGTK 60

Query: 52  ----IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
               I      ++  +   +   G   +T  ++D A++G  +F +         TR+G F
Sbjct: 61  QKQIIGDISPGISMDETITNFNQGPIKTTDNKMDVAIQGKGFFLVSDAAGNQFYTRNGNF 120

Query: 107 KVTDDGSLVSASGKYPVLDMA--SVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
           +  + G L+++ G Y +           I   ++ F V +   IS  G  +    +   +
Sbjct: 121 RTDNQGDLITSEGYYVLGTNTATGAVGHINVGNQKFEVAKDNTISLDGNAMYKFNIVDFN 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224
                 +  ++             ++     +  +E SN + + E+  M+ +++++ +  
Sbjct: 181 DYNNLKKEGDNLY----SGGGAMKVNNALTIQSAIESSNVDMVSEINNMMTISREYEANQ 236

Query: 225 TLIDENEKSMLEAIRNIAS 243
            +I   +  + +    I S
Sbjct: 237 KIIQAMDSKLAKIASEIGS 255


>gi|150019058|ref|YP_001311312.1| flagellar basal body rod protein FlgG [Clostridium beijerinckii
           NCIMB 8052]
 gi|149905523|gb|ABR36356.1| protein of unknown function DUF1078 domain protein [Clostridium
           beijerinckii NCIMB 8052]
          Length = 255

 Score =  132 bits (332), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 47/256 (18%), Positives = 105/256 (41%), Gaps = 15/256 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M   F    +   A +++L  +++++ N  T G+++  V F +++    +          
Sbjct: 1   MFNIFATAKSGMNAYQEKLDYLSNDLVNISTTGYKSTDVNFKDLLTESLDRRGTPLVEKK 60

Query: 56  ---ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDD 111
               + V  G  Y + + G+ ++TG + D A++G  +FAL      I+ TRDG FK+  +
Sbjct: 61  AITGTGVKLGVNYANNKQGNLLTTGGKTDLAIDGKGYFALSKEDGSIVYTRDGNFKIDSN 120

Query: 112 GSLVSASG---KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
           G+LV ++G        + AS       ++++    + G   +    +A +G   +  + G
Sbjct: 121 GALVDSNGTKVYVQYENGASEGNPALDREKMSIDKDGGISMEVDGQVAKIGTIPIFTAIG 180

Query: 169 FVR--RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
                   +          +   S   +++G LE SN ++      ++   + F   +  
Sbjct: 181 DKSFIPIGNSYFVPSSDAQVTLSSNYNIEQGMLEGSNVDAGETFSDIVLTQRAFQLSSKA 240

Query: 227 IDENEKSMLEAIRNIA 242
           +   +  +   I N+ 
Sbjct: 241 VTTADD-LWSMINNMR 255


>gi|327441421|dbj|BAK17786.1| flagellar basal body rod protein [Solibacillus silvestris StLB046]
          Length = 280

 Score =  132 bits (332), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 51/279 (18%), Positives = 108/279 (38%), Gaps = 39/279 (13%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGA---------- 47
           M   F       +A +++   + +NM+N +T GF++ +     F +++ +          
Sbjct: 1   MFKGFYTVATGMVAQQRKTEILTNNMANANTPGFKSDQTTIRSFPDMLMSAVNSTNIPTE 60

Query: 48  ------IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFAL-------------EGDA 88
                   N +    + V   +   ++  G   STG   D AL              G  
Sbjct: 61  NGFAIKNLNPVGAVNAGVYLQETMPNQVQGQIYSTGLNTDIALINSSMPTDEASGNSGQI 120

Query: 89  WFALESPR-GIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGE 147
           +F LE+       TR+G F +   G+LV+  G + +   A+        D I    +   
Sbjct: 121 FFRLENESGTESYTRNGNFTLDGQGNLVNPQGLFVL--DANGERMQFDNDNIRISSDGAI 178

Query: 148 ISQKGKVIATMGLYSVDMSQGFVRRENSGISP----NIPPTPLEDLSGVTVKRGFLEDSN 203
             +    + T+G+   +     V+R+N   +     ++P    +     ++++ +LE SN
Sbjct: 179 FDENDVQVGTLGVAFSENPDVLVKRDNGLFNTLDGVDLPSAYGQANVQFSMQQQYLEGSN 238

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            ++   M  ++   + F +   ++   +KSM +A+  I 
Sbjct: 239 VDASKAMTDLLTAYRAFEANQKVLQAYDKSMEKAVNEIG 277


>gi|92114097|ref|YP_574025.1| flagellar basal-body rod FlgF [Chromohalobacter salexigens DSM
           3043]
 gi|91797187|gb|ABE59326.1| Flagellar basal-body rod FlgF [Chromohalobacter salexigens DSM
           3043]
          Length = 253

 Score =  132 bits (332), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 52/247 (21%), Positives = 93/247 (37%), Gaps = 12/247 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M        +      Q+ S V  N+SN  T GFR        V       +  + S VA
Sbjct: 1   MDRIIYTAGSGASQAMQQQSVVNHNLSNVSTPGFRAELDAMRAVPVQGDGRLATRTS-VA 59

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119
           +         G   +TG  LD A++GDA+ A++ P+G    TR G  +V  DG +++  G
Sbjct: 60  ATTSGTDFSPGYMNATGRRLDVAMQGDAFLAIQDPQGGEAYTRRGDLQVDADG-MLTVKG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGE---ISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           +  + +   + +    +  I   G        +   ++     L  V      + R + G
Sbjct: 119 EPVMGEQGPIVVPPDAEFSIGADGSISVLEAGANPDEIAPVGRLKLVTPDLQALTRGDDG 178

Query: 177 ISPNIPPT------PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
                P        P        ++ G LE SN ++   M  MI   ++++    +I+  
Sbjct: 179 WFRLPPGDDAEIAAPQPLDEDARLQSGVLEGSNVSATDAMVAMIDGARRYDMQMKVIESA 238

Query: 231 EKSMLEA 237
           +++   A
Sbjct: 239 DQNAQRA 245


>gi|288940410|ref|YP_003442650.1| flagellar basal-body rod protein FlgF [Allochromatium vinosum DSM
           180]
 gi|288895782|gb|ADC61618.1| flagellar basal-body rod protein FlgF [Allochromatium vinosum DSM
           180]
          Length = 246

 Score =  132 bits (332), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 47/237 (19%), Positives = 89/237 (37%), Gaps = 6/237 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + ++         S    N++N +T GFR            ++  +     +V 
Sbjct: 1   MDRFLYLAMSGAKETAYAQSINNHNLANANTTGFRQALAY--AYTAPVRGPVYDSRDYVQ 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119
            G + L    G+  ST  +LD A++G+ +  +++  G    TR G  ++   G L +  G
Sbjct: 59  VGNQVLDFCPGTLQSTERDLDVAIQGEGFLVVQTEDGGEAYTRAGNLQIDATGVLRNERG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176
              + D   + I   +   I   G            A   +     V+     + R   G
Sbjct: 119 LAVLGDGGPITIPEYESLSIGTDGTITIRPAGAAPNALAAVDRLRLVNPDTQNLLRGEDG 178

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           +       P    +GV V  G LE SN N++  + +MI L++ F +   +++    +
Sbjct: 179 LIRAQDGEPAVADAGVRVISGMLETSNVNTVASLTRMIELSRAFETHIKMMETASSN 235


>gi|325921025|ref|ZP_08182907.1| flagellar basal-body rod protein FlgF, proteobacterial [Xanthomonas
           gardneri ATCC 19865]
 gi|325548507|gb|EGD19479.1| flagellar basal-body rod protein FlgF, proteobacterial [Xanthomonas
           gardneri ATCC 19865]
          Length = 251

 Score =  132 bits (332), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 55/245 (22%), Positives = 95/245 (38%), Gaps = 10/245 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  + +    A  Q   TV+ N++N DTVGF+            I+           
Sbjct: 1   MDKALYVAMTGARASLQAQGTVSHNLANVDTVGFKAALANTEAF--KIQGKGYPSRIDAL 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
              +   +  G    TG  LD +L+ D W +++SP      TR+G   +T +G LV+A+G
Sbjct: 59  HVDQGFDRSQGHQQVTGNPLDVSLQQDRWLSVQSPDGSEAYTRNGELALTANGQLVTANG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG----LYSVDMSQGFVRRENS 175
              + +  +     P +           I  +G+   TM     +  VD     + R   
Sbjct: 119 HAVLDEGGAPMTIPPHQAMEIGSDGSISIIPQGEGPQTMAIVGKMKVVDAPADRLTRRPD 178

Query: 176 GISPNIPPTPLEDLSGVT---VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
           G+  N    P +     T   +  G LE SN ++   + +MI L ++F     +I   + 
Sbjct: 179 GLMRNTSTDPAQAFQIATGKTINSGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNGDD 238

Query: 233 SMLEA 237
           +   A
Sbjct: 239 NAQSA 243


>gi|222053611|ref|YP_002535973.1| protein of unknown function DUF1078 domain protein [Geobacter sp.
           FRC-32]
 gi|221562900|gb|ACM18872.1| protein of unknown function DUF1078 domain protein [Geobacter sp.
           FRC-32]
          Length = 293

 Score =  132 bits (331), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 48/286 (16%), Positives = 97/286 (33%), Gaps = 49/286 (17%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
           ++   G++  L   + ++ + +N+SN +TVGF+  ++ FS+++     +  Q    +   
Sbjct: 5   SAMFTGVSGLLNNGEAMNVIGNNISNVNTVGFKGARMLFSDMLSQNIGNNSQIGRGMQIQ 64

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII---------LTRDGRFKVTDDGS 113
           K       GSF ST    D  ++G+++FAL+ P  +          L+R G F V  D  
Sbjct: 65  KVENLFGQGSFESTENVTDLGIQGNSFFALKPPTTVAPVAAQNAAFLSRAGAFHVDKDLY 124

Query: 114 LVSASGKYPVLDMASVPIQ---------------IPQKDEIFNVGEKGEISQKGKVIATM 158
           LV+  G   +                        +     I  + + G  +         
Sbjct: 125 LVNPDGYQVLDTAGQPIRFYTGGTADQNFSKVVKVEPNGLITYLAQDGITNLYYSTTGVA 184

Query: 159 GLYSVDMSQ---------------GFVRRENSGISPNIPPT----------PLEDLSGVT 193
           GL +   +                G  +   S                      + +   
Sbjct: 185 GLPTTTANAAAVQRLAVVSATDLSGLEKAGGSLYKATATSGVSAAGFTLAGNQPNGTSEK 244

Query: 194 VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           V    LE SN +   +  +MI   + +++ +  I   ++   E + 
Sbjct: 245 VLSNSLEQSNVDLASQFVKMIITQRAYSANSKTITTADEMTQEVLN 290


>gi|302878277|ref|YP_003846841.1| flagellar basal-body rod protein FlgF [Gallionella
           capsiferriformans ES-2]
 gi|302581066|gb|ADL55077.1| flagellar basal-body rod protein FlgF [Gallionella
           capsiferriformans ES-2]
          Length = 247

 Score =  132 bits (331), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 51/241 (21%), Positives = 94/241 (39%), Gaps = 6/241 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       +     + Q+ + V++N++NT+T GFR     F  V   +  +     +FV 
Sbjct: 1   MDKLIYTAMTGASHVLQQQAAVSENLANTNTPGFRATLNTFRAV--PLVGEGLPTRAFVV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
                      +F  TG  LD A+ G  W A++ P      TR+G F+++  G L + +G
Sbjct: 59  DSTAGFDFTPAAFQPTGRSLDVAVNGTGWLAVQGPDGKEAYTRNGSFQISSSGVLQTRNG 118

Query: 120 KYP---VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
                    +   P       +   +    E +Q   V+    L  V+     + R   G
Sbjct: 119 LNVLSDSGPITIPPGTQLTFAKDGTISTVPEGNQATSVVVVGRLKLVNPDVAKLERSGDG 178

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           +      +     +   +  G LE SN +++  M  MI L +KF+    ++   + +  +
Sbjct: 179 MFRMKDGSTAPADAKTEIAPGNLEGSNVSTVEMMVNMISLARKFDMQMKMLQTADNNAKQ 238

Query: 237 A 237
           A
Sbjct: 239 A 239


>gi|224372658|ref|YP_002607030.1| flagellar basal-body rod protein [Nautilia profundicola AmH]
 gi|223589304|gb|ACM93040.1| flagellar basal-body rod protein [Nautilia profundicola AmH]
          Length = 261

 Score =  132 bits (331), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 56/261 (21%), Positives = 105/261 (40%), Gaps = 23/261 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDID---- 53
           M   +     A +    RL+ +++N++N +T GF+   +    F  +    ++++     
Sbjct: 1   MINGYYDATGAMVTQFNRLNVISNNLANVNTAGFKQDDIIIGDFERLFSEKRDNLPLENN 60

Query: 54  ----------QKISFVASGKEYLSKEVGSFISTGTELDFAL-EGDAWFALESPRGIILTR 102
                              +EY + ++G    T   LD AL E + +FA+ +P G  LTR
Sbjct: 61  TKEAAKFINRNLNKVPIVVEEYTNYDIGDLQKTSNPLDIALKEKNQFFAINTPNGEKLTR 120

Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162
            G F +  +G LV+  G   + +  +             + + G I Q  + +AT  +  
Sbjct: 121 AGNFNLDANGYLVTKDGYQVLDEQNNPIQ--LAPSYPVTIDKNGNIYQNNEKVATFKIVK 178

Query: 163 VDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222
           +D      ++    +   IP T   D    T+ +GFLE SN N + EM  +I   +    
Sbjct: 179 IDNLNTL-KKVGDNMFDFIPDTATIDTKNSTL-QGFLEKSNVNPIREMTDLIETNRLVEQ 236

Query: 223 ITTLIDE-NEKSMLEAIRNIA 242
              ++    +    +AI  +A
Sbjct: 237 YQKVMTTFMDDLNRDAIEKLA 257


>gi|255322393|ref|ZP_05363539.1| flagellar basal-body rod protein [Campylobacter showae RM3277]
 gi|255300766|gb|EET80037.1| flagellar basal-body rod protein [Campylobacter showae RM3277]
          Length = 270

 Score =  132 bits (331), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 45/266 (16%), Positives = 100/266 (37%), Gaps = 24/266 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDID---- 53
           M   +     A +    RL  +A+N++N +T+GF+   V    F  +    ++++     
Sbjct: 1   MNNGYYQATGAMVTQFNRLDVIANNLANINTIGFKRDDVVVGDFERIFKEYRDELPIENH 60

Query: 54  ----------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDA--WFALESPRGIILT 101
                              ++Y+    G    +  +LDFA++ +   +     P  + LT
Sbjct: 61  TKDAAKFLNRTIDRVPQISEQYVDFSQGGLKFSNNDLDFAMKREDLFFLVEVKPGDVRLT 120

Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMA---SVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158
           ++G F + +DG LV+  G   +       +       + E F+  + G +    + +A +
Sbjct: 121 KNGSFNLDEDGFLVTKEGYKVLPSDYFTNNFQGIQIPQGERFSADKNGNLYSNEEPLARL 180

Query: 159 GLYSVDMSQGFVRRENSGIS-PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217
            +      +   +  ++    PN+            V   + + SN N++ EM  +I   
Sbjct: 181 YIAQPKEIRNLTKEGDNLYVLPNLKELEDVGGEIDAVAWKYTQISNVNAVTEMVGLIETQ 240

Query: 218 QKFNSITTLIDEN-EKSMLEAIRNIA 242
           +       ++  + +    EAI  +A
Sbjct: 241 RFVEMYQKVMTSHMDDLNQEAISKLA 266


>gi|167626156|ref|YP_001676450.1| flagellar basal-body rod protein FlgF [Shewanella halifaxensis
           HAW-EB4]
 gi|167356178|gb|ABZ78791.1| flagellar basal-body rod protein FlgF [Shewanella halifaxensis
           HAW-EB4]
          Length = 244

 Score =  132 bits (331), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 47/242 (19%), Positives = 95/242 (39%), Gaps = 3/242 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M             + +  +  A+N++N DT GF+    + + +V     +  Q      
Sbjct: 1   MDRMIYTAAKGAARVMEAQAIRANNLANADTTGFKADLERVNAMVVTPTGNSLQTRVLAQ 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           +     S++ G+   TG  LD A+     FA+ +  G   TR G      +G  ++  G+
Sbjct: 61  TQSNGFSQQTGAMNPTGRALDLAINDSGLFAVMTAEGEGYTRSGAITPDANG-QLTLDGR 119

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ-GFVRRENSGISP 179
                   + +   ++  + + G    I+ +G +I  +G   +       + +   G+  
Sbjct: 120 PVAGLDGPIVLPEYRELFVGDDGRLSIIADEGGIIEEVGQLKLVNPDISAMSKGLDGLLY 179

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
                PL     V+V  GFLE SN  ++ E+   + L+++F     L+    + + EA  
Sbjct: 180 PADRQPLPASEQVSVSSGFLEASNVQAVGELIAAMDLSRQFEVQVKLMKSA-EKLAEAGN 238

Query: 240 NI 241
            +
Sbjct: 239 RL 240


>gi|323341367|ref|ZP_08081611.1| flagellar basal-body rod protein FlgG [Lactobacillus ruminis ATCC
           25644]
 gi|323091244|gb|EFZ33872.1| flagellar basal-body rod protein FlgG [Lactobacillus ruminis ATCC
           25644]
          Length = 256

 Score =  132 bits (331), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 47/250 (18%), Positives = 101/250 (40%), Gaps = 14/250 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50
           M    +I  +   A +  +  V++N++N DT+G++  +  F E++    N          
Sbjct: 3   MSQILSISRSGLNAYQHEMDVVSNNLANVDTLGYKDKRTTFQELLNNGTNANEVGLSQNA 62

Query: 51  DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVT 109
                 + +   +   +   G+F ST    D A++G+ +F +      +  TRDG F+  
Sbjct: 63  GNVAINAGLNVQQVNENLSQGAFKSTAGTYDLAIDGEGYFGVRDGANNLYLTRDGSFRRD 122

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169
            DG+LV++ G    +  ++VP     KD   ++   G +S     +  + L+    S   
Sbjct: 123 ADGNLVTSKGMKVEV-QSNVPSSQWPKDGEVSISTSGYVSIGNVRVGRILLFRPQNSIDM 181

Query: 170 VRRENSGISP--NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
               N+      N+  +   +     + +G +E SN +    M +MI   + +   +  +
Sbjct: 182 NDIGNNLYRCDGNLISSANNNAGFGQINQGLVELSNVDVADTMSKMIITQRAYQMNSKAL 241

Query: 228 DENEKSMLEA 237
              ++ +   
Sbjct: 242 QSTDEMLQTI 251


>gi|152997581|ref|YP_001342416.1| flagellar basal-body rod protein FlgF [Marinomonas sp. MWYL1]
 gi|150838505|gb|ABR72481.1| flagellar basal-body rod protein FlgF [Marinomonas sp. MWYL1]
          Length = 247

 Score =  132 bits (331), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 50/245 (20%), Positives = 96/245 (39%), Gaps = 6/245 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  + ++  +      +  A+N++N  T GFR+   +   +   +  D      +  
Sbjct: 1   MDKALYLAMSGGVQTMNAQTIHANNLANVSTTGFRSDFEQARSM--QVYGDYHPSRVYAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G  I TG  LD A+ GD + A+         TR G F++   G LV+  G
Sbjct: 59  TENPATRYTQGDMIQTGRNLDVAVAGDGFIAVYDESGQEAYTRAGDFQINAAGQLVTGRG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG---KVIATMGLYSVDMSQGFVRRENSG 176
                    + +       I   G    + Q G   +V     +  V+  +  +R+E  G
Sbjct: 119 LPVAGVGGPIFLPPADSINITADGSISIVPQGGANNEVAVLNQIKLVNPDKQNLRKEEDG 178

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           +        L+    V +  GF+E SN N++ EM  +++L ++F     ++D    +   
Sbjct: 179 LIHTRDGQALDADPNVQLVSGFIEGSNVNAVEEMTHIMNLARRFEMNVKMMDTIRDNADS 238

Query: 237 AIRNI 241
           + R +
Sbjct: 239 SARIL 243


>gi|322383079|ref|ZP_08056906.1| flagellar hook-basal body-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321152741|gb|EFX45367.1| flagellar hook-basal body-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 271

 Score =  132 bits (331), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 44/272 (16%), Positives = 104/272 (38%), Gaps = 35/272 (12%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID---------- 53
             N  ++    L+Q+L  +A+N++N +TVG++     F E++ ++KN  +          
Sbjct: 1   MINASVS-MNGLQQKLDILANNIANINTVGYKRKDASFQEILKSVKNQPEKFQLPGRMTP 59

Query: 54  ---QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT- 109
              Q        +       G   +T   LD  ++GD  F +        T+ G F+++ 
Sbjct: 60  SGLQLGWGARLSQISSDFTQGPVENTQNSLDLMVQGDGMFEILVDGKPYWTKSGSFQLSV 119

Query: 110 ---DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ-----KGKVIATMGLY 161
              + G  ++    + V  +   PI +P   +     +   ++      +   +  + + 
Sbjct: 120 MPGNQGLALTTKDGHYVSGLNGEPIILPPNTQPKIDEQGNVVAYSETGARPVQVGRIRVV 179

Query: 162 SVDMSQGFVRRENSGIS-----------PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEM 210
            ++  Q       +  +            +     +++   + V +G+LE SN N   EM
Sbjct: 180 QIERPQLLEAVGENLYTLKAGIEKGQALRDAAGLTVQEQGKLKVMQGYLEQSNVNLSDEM 239

Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            ++I++ + F   +  +  ++  M     N+ 
Sbjct: 240 TELINVQRAFQLSSRAVTSSDSMMG-LANNLR 270


>gi|325274798|ref|ZP_08140826.1| flagellar basal body rod protein FlgF [Pseudomonas sp. TJI-51]
 gi|324100066|gb|EGB97884.1| flagellar basal body rod protein FlgF [Pseudomonas sp. TJI-51]
          Length = 246

 Score =  132 bits (331), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 47/246 (19%), Positives = 98/246 (39%), Gaps = 9/246 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + +             A+N++N  T GF+    +   +   +  D     +F  
Sbjct: 1   MDKLLYVAMTGASQNALAQKAHANNLANVSTNGFQRDLEQARSM--PVFGDSFPARAFAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           + +       G  + TG +LD A+ G+ + A+++P       R G   +   G L + +G
Sbjct: 59  TERPATDFTQGPLVETGRDLDVAVTGNGFIAVQAPDGSEAYVRTGSLNIDALGVLRAGNG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQ--KGKVIATMGLYSVDMSQ-GFVRRENSG 176
              + +   + +   QK E+   G     S     +VIA +    +       +++   G
Sbjct: 119 MPVIGNGGPIAVPPEQKVEVGADGTLSIRSMGEDPRVIAEVDRIKLVNPDIKGLKKGLDG 178

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN---EKS 233
           +       P +    V V  GFLE SN N++ EM  ++ L+++F     +++     +++
Sbjct: 179 LIHTTSGQPADADVNVRVVSGFLEGSNVNAVEEMTSVLALSRQFELHVKMMNTAKEGDEA 238

Query: 234 MLEAIR 239
           M   ++
Sbjct: 239 MARVLQ 244


>gi|126176155|ref|YP_001052304.1| flagellar basal-body rod protein FlgF [Shewanella baltica OS155]
 gi|125999360|gb|ABN63435.1| flagellar basal-body rod protein FlgF [Shewanella baltica OS155]
          Length = 244

 Score =  132 bits (331), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 93/242 (38%), Gaps = 3/242 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M+       +  + + +  S  A+N++N +T GF+    + + V    + +         
Sbjct: 1   MEKMLYTAASGAVRILEAQSIRANNLANAETAGFKADLERVNAVPLVAQGNSLNTRVMAQ 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           +     S++ G    TG  LD A+     F++        TR G  +   +G  ++  G+
Sbjct: 61  TESSGFSQQSGVINPTGRSLDLAIRDRGLFSVAVDGAEAYTRSGAIETNAEG-QLTIDGR 119

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ-GFVRRENSGISP 179
             +     + +   +   +   G    +  +G +I  +G   +       +++   G+  
Sbjct: 120 PVLGIDGPIALPEYKDVFVGEDGTVSVLPAEGGIIEEVGRLKLVNPDFALMQKGQDGLLY 179

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
                 +    GV V  GFLE SN  ++ E+   + L+++F     L+    + + EA  
Sbjct: 180 RRDGQAVPQDEGVLVDSGFLESSNVQAVSELIASMDLSRQFEIQVKLMKSA-EKLAEAGN 238

Query: 240 NI 241
            +
Sbjct: 239 RL 240


>gi|225569971|ref|ZP_03778996.1| hypothetical protein CLOHYLEM_06066 [Clostridium hylemonae DSM
           15053]
 gi|225161441|gb|EEG74060.1| hypothetical protein CLOHYLEM_06066 [Clostridium hylemonae DSM
           15053]
          Length = 294

 Score =  132 bits (331), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 45/291 (15%), Positives = 96/291 (32%), Gaps = 52/291 (17%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S    +A   + + ++  +++N++N +T G+++    F + +               
Sbjct: 1   MVKSMYAAIAGLRSHQSKMDVISNNIANVNTWGYKSRSANFQDAMYQNVINSTAGNVNAG 60

Query: 49  ---KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES----------- 94
                +  Q    V  G    +   GS+  TG  L+  + G+ +F +             
Sbjct: 61  GTGGQNSSQLGYGVNVGSITTNFTTGSWGFTGDPLNCMINGNGFFIVGPMIADPTDGIAS 120

Query: 95  ----PRGIILTRDGRFKVTDDGSLVSASGKYPVL---------------------DMASV 129
                 G+ L+R G F V ++G L+     Y                        D    
Sbjct: 121 NNFATSGLSLSRVGIFSVDNNGYLIDDGRNYVYGFTQNADGTWDTDVLRPLQIPNDATGE 180

Query: 130 PIQIPQKDEIFNVGEKGEISQKGKV-IATMGLYSVDMSQGFVRRENSGISPNIPPTPLED 188
             +I       +    G    K ++ I  + L +V+   G  +      S       +  
Sbjct: 181 QYKIQTYKIGTDGTITGITFDKEQITIGKLALAAVENPNGLEQSAGYLYSAGPNAGQITA 240

Query: 189 LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           + G      +LE SN     +M  MI   + + + + +I   ++ + + + 
Sbjct: 241 VEGDYFLSNYLEMSNVELASDMASMITTQRGYQANSKIITVTDEMLEQLVN 291


>gi|206890142|ref|YP_002249849.1| flagellar hook basal-body protein FlgG [Thermodesulfovibrio
           yellowstonii DSM 11347]
 gi|206742080|gb|ACI21137.1| flagellar hook basal-body protein FlgG [Thermodesulfovibrio
           yellowstonii DSM 11347]
          Length = 239

 Score =  132 bits (331), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 48/250 (19%), Positives = 97/250 (38%), Gaps = 21/250 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     I +      E  LS +++N++N +T G++     F+  +  + +    + + + 
Sbjct: 1   MYKGIYITMTGMSMRENELSAISNNLANINTTGYKKQ--SFASRLYPLLSGKPSQSNVIY 58

Query: 61  SG--------KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDG 112
                      +Y+    G+   T    D  ++G+ +F +     I+ TR+G F    D 
Sbjct: 59  QDARAQTYFGTQYIDTSQGALKQTHNPFDLGIQGEGFFVVRQGNKILYTREGSFTRDKDN 118

Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172
            LV+ +G   + +  +    I         G+ G I   G  I  + L  ++  +   + 
Sbjct: 119 YLVTQTGLRVLDENNNP---IIIDGTKIEYGKDGTILVDGNPIGRIKLVKLNNLRHVGQS 175

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
              G+            +   + +G++E+SN N M EM QMI   + F+    +     +
Sbjct: 176 LYEGVEAGQ--------ANGQILQGWIENSNVNPMSEMVQMIQAIRNFDFTQRVTTNFSE 227

Query: 233 SMLEAIRNIA 242
               A+  IA
Sbjct: 228 LAQRAVSEIA 237


>gi|239628978|ref|ZP_04672009.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239519124|gb|EEQ58990.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 246

 Score =  131 bits (330), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 87/249 (34%), Gaps = 12/249 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIK---VKFSEVVGAIKND----ID 53
           M + F    +  L  ++ L   A+N++N  T G++  +     F+E +    N     + 
Sbjct: 1   MFSGFYTAASGMLMNQRSLDMAANNIANVKTSGYKPKRLVKTTFNEQLVRQMNGQTQGLG 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113
           Q  +     +E  +      + TG   D A+ GD +F ++   G  LTR+G FK  ++G+
Sbjct: 61  QGSTISIGTREMTTHGQAPVVDTGQTYDLAINGDGFFVIQGTDGQYLTRNGHFKRDEEGN 120

Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRE 173
           L+       + D   V +         +         +   I  +     D         
Sbjct: 121 LILPGVGQVMGDGGPVYVDESGFRVGADGIIYDNEDGELDQIQIVEPDDYDN-----LTF 175

Query: 174 NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
               +              TV +G LE S  N   EM + + + + F S    +   ++ 
Sbjct: 176 YDNGTYGAGGGVTLTQVYPTVYQGKLEQSGVNLNNEMTRAMEVQRAFQSCGKALTIIDQM 235

Query: 234 MLEAIRNIA 242
             +    I 
Sbjct: 236 NQKTANEIG 244


>gi|187778756|ref|ZP_02995229.1| hypothetical protein CLOSPO_02351 [Clostridium sporogenes ATCC
           15579]
 gi|187772381|gb|EDU36183.1| hypothetical protein CLOSPO_02351 [Clostridium sporogenes ATCC
           15579]
          Length = 350

 Score =  131 bits (330), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 43/331 (12%), Positives = 93/331 (28%), Gaps = 92/331 (27%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50
           M  S   G++   A + RL  V +N++N +T  F++  ++F +++    +          
Sbjct: 17  MLRSMYSGISGLKAQQTRLDIVGNNIANANTTAFKSQSIRFQDMLSQNMSSATGPSANLG 76

Query: 51  --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP------------- 95
             +  Q    V     +     G+  +TG  LD A++G  +F +                
Sbjct: 77  GTNPRQVGLGVQVAGIFTKFTTGNMQTTGRNLDMAIDGPGFFIVGKGKFSDTTTISTSGD 136

Query: 96  ---------RGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQ----------- 135
                      +  T+DG F + +DGSL+++ G   +                       
Sbjct: 137 DEGAINGGTMEVSFTKDGSFNLDEDGSLITSDGLRIMGYAIDSAAITKDATTGKIKVGFK 196

Query: 136 ----------------------------------KDEIFNVGEKGEISQKGKVIATMGLY 161
                                               +   +     +      +  + + 
Sbjct: 197 NADEDPKADATKLVPLAIPDEIEKGSEKVRVQSFTIDKDGLIVASLVDGTSAALGQIAMA 256

Query: 162 SVDMSQGFVRRENSGI-------------SPNIPPTPLEDLSGVTVKRGFLEDSNANSMY 208
           S     G  +   +                               +  G +E SN +   
Sbjct: 257 SFKNEGGLEKMGKNLYRNSANSGEAIIRSGRGTDADKDNSKGYGDMLNGMIEMSNVDLAE 316

Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           E  +MI   + F +   +I   ++ + E + 
Sbjct: 317 EFTEMIVANRAFQACGKMITTGDEILQELVN 347


>gi|295097202|emb|CBK86292.1| fagellar hook-basal body proteins [Enterobacter cloacae subsp.
           cloacae NCTC 9394]
          Length = 245

 Score =  131 bits (330), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 54/246 (21%), Positives = 93/246 (37%), Gaps = 10/246 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    L+A  A   R +  ++NM+N+ T GFR     F  V   ++    +  + VA
Sbjct: 1   MDRAIYTALSAANAALNRQAVTSNNMANSATAGFRAQLAAFRAV--PVEGQTLKTRALVA 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
               Y    +G    TG  LD AL  + W A+  P      TR+G  ++  DG+L    G
Sbjct: 59  ESTPYNDDTMGPITHTGRSLDVALPQNGWLAVALPDGSEGYTRNGGIEIDRDGAL--QVG 116

Query: 120 KYPVLDMASV----PIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
             P++   +     P       E   V   G   +   V+    L  V+     +   + 
Sbjct: 117 GKPLMGDGAPLVVPPHSQITIAEDGTVSALGAGDEPTAVVPVGRLKMVNAPMSTLIHGDD 176

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
           G+        L     + +    LE SN + +  M +MI   + F     +I   +++  
Sbjct: 177 GLFRPAAGNALPQDDAMRLSPESLEGSNVSPVKAMTEMIATARSFEMNMKVIRTADENAQ 236

Query: 236 EAIRNI 241
           +A   +
Sbjct: 237 KA-NQL 241


>gi|254780378|ref|YP_003064791.1| flagellar basal body rod protein FlgG [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040055|gb|ACT56851.1| flagellar basal body rod protein FlgG [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 262

 Score =  131 bits (330), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 54/264 (20%), Positives = 106/264 (40%), Gaps = 25/264 (9%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55
             +F I  A   A +  L  +A+N++N +T G++  + +F++ +   +            
Sbjct: 1   MKAFMIAAAGMSAQQTNLEIIANNIANINTTGYKRARAEFADFLYQAEKVAGSPSQSADK 60

Query: 56  ---------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGR 105
                     S V           G  + TG  LD AL G  WF +E+P    + TR G 
Sbjct: 61  AVVPEGISIGSGVQISSVRNVYTQGEVVHTGNNLDLALVGRGWFQVETPDKTVMYTRAGS 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVP--IQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
           F +   G LV+A G   V  +       +I        +   G+ S   + +  + + + 
Sbjct: 121 FNIDSKGQLVTADGNTLVPGIVIPEETREIKVSRSGQILAVTGKNSDF-QPVGQLLIANF 179

Query: 164 DMSQGFVRRENSGISPN-IPPTP----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
               G     ++ ++   +   P     +D+    VK+G+LE SN +++ E+ +MI   +
Sbjct: 180 INEAGLRNIGDNLLARTSVSGDPIISNPDDIGFAHVKQGYLEASNVDAVKEISEMISAQR 239

Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242
            +   + +I+  ++ M   I  + 
Sbjct: 240 AYEMNSKVIEAADE-MSSLITKMR 262


>gi|148358807|ref|YP_001250014.1| flagellar basal body rod protein FlgF [Legionella pneumophila str.
           Corby]
 gi|296106852|ref|YP_003618552.1| flagellar basal-body rod protein FlgF [Legionella pneumophila
           2300/99 Alcoy]
 gi|148280580|gb|ABQ54668.1| flagellar basal body rod protein FlgF [Legionella pneumophila str.
           Corby]
 gi|295648753|gb|ADG24600.1| flagellar basal-body rod protein FlgF [Legionella pneumophila
           2300/99 Alcoy]
          Length = 248

 Score =  131 bits (330), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 53/247 (21%), Positives = 110/247 (44%), Gaps = 7/247 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI--SF 58
           M+      ++   +  +R   +A+N++N +T GF+    +   +     N  +Q    SF
Sbjct: 1   MEPILYNSISGSRSDFKRQEIIANNLANINTPGFKADLYQAQTMYMNNANGKNQFSAHSF 60

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSA 117
           +      +    G  I+TG +LD A++GD W A++  +     TR G  ++  +G L++A
Sbjct: 61  ITQNANGIDTSPGEIITTGRDLDVAIDGDGWMAVQDSQGREAYTRGGSLRLNPNGQLITA 120

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV---IATMGLYSVDMSQGFVRREN 174
           SGK  + D   + I   Q  EI + G    +  +G V        +  V + +  + + +
Sbjct: 121 SGKVVLGDGGPISIPPAQSIEIGSDGTISIVPLEGDVKSLAILDRIKLVTLDRNNIYKND 180

Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
            G+          + +   ++ G LE SN N++ +M  MI   ++F++   L+   + + 
Sbjct: 181 EGLIQLKSGAATANSNI-KLQSGALEGSNVNAIDQMVAMISAGREFDAQMKLLSTVDDNG 239

Query: 235 LEAIRNI 241
            +  + +
Sbjct: 240 QKLAQLL 246


>gi|138896904|ref|YP_001127357.1| flagellar hook-basal body protein [Geobacillus thermodenitrificans
           NG80-2]
 gi|134268417|gb|ABO68612.1| Flagellar hook-basal body protein [Geobacillus thermodenitrificans
           NG80-2]
          Length = 273

 Score =  131 bits (330), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 60/273 (21%), Positives = 105/273 (38%), Gaps = 31/273 (11%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S +       AL+QRL T++ N+ N++T GF+  +  F+E++    + +        
Sbjct: 1   MLRSMHTAANTMNALQQRLDTLSHNIVNSNTTGFKRREASFAELLTQQVDRLPDDEAPRQ 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALE-GDAWFALESPR-----GIILTR 102
                +  +        L    G    TG  LDFA    + WF +          I  TR
Sbjct: 61  TPAGVRYGNGAGLASTMLVTAQGPLTETGRALDFAFTAANQWFRVRVTDGNGVATIGYTR 120

Query: 103 DGRFKVTDDGSLVS--ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
            G F +T  G  ++   S   PVLD  + PI++P     F +   G ++      A +  
Sbjct: 121 AGNFSLTPIGDRLALVTSDGRPVLDETNAPIELPAHATGFQLSPTGTLTATDANGAVVAR 180

Query: 161 YSVD-----MSQGFVRRENS-GISPNIPPTPLEDLSGVT----VKRGFLEDSNANSMYEM 210
            ++        Q      ++    P  P    E    +     +K+G LE SN +   E+
Sbjct: 181 VNLGVTVIRRPQLLEALGDNVFTLPTAPGATQELNGNLRSQIAMKQGALEQSNVDLGEEL 240

Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
             ++  T+ +      I  +E+ +   I N+ S
Sbjct: 241 IGLMATTRAYQLNARAISISEQMLG-LINNLRS 272


>gi|154175436|ref|YP_001408075.1| flagella basal body rod protein [Campylobacter curvus 525.92]
 gi|112802880|gb|EAU00224.1| flagella basal body rod protein [Campylobacter curvus 525.92]
          Length = 273

 Score =  131 bits (330), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 45/270 (16%), Positives = 107/270 (39%), Gaps = 28/270 (10%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDID---- 53
           MQ  +    A  +    RL+ +++N++N +T+GF+   V    F  +    ++++     
Sbjct: 1   MQNGYYQATAGMVTQFSRLNVISNNLANVNTIGFKRNDVVIGDFERIFKETQDELPLKNH 60

Query: 54  ----------QKISFVASGKEYLSKEVGSFISTGTELDFALEG-DAWFALESPRGIILTR 102
                              +EY     G F  +   LDFA++  D +F +++P G+ LT+
Sbjct: 61  TKDAAKFLNRTLDRVPQVSEEYTDFSAGGFKYSSNTLDFAIKREDMFFLVDTPNGVRLTK 120

Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF---------NVGEKGEISQKGK 153
           +G F + +DG +V+  G   + +         +  ++          N         + +
Sbjct: 121 NGSFNLDEDGFIVTKEGYRVLPNNYQTLAPEQRGIQVPLDRSLSVDKNGNIYTMNEGESE 180

Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQM 213
            I+   +      +   +  ++   P      ++     T+ +G+++ SN N + EM  +
Sbjct: 181 QISKFFIAQPREIRELKKIGDNLFEPKNLDDVIDIDDADTLMQGYVQMSNVNPVTEMVGL 240

Query: 214 IHLTQKFNSITTLIDENE-KSMLEAIRNIA 242
           I   +  +    ++  +      +A++ +A
Sbjct: 241 IETQRLVDMYQKVMTSHMTDLNQDAVQKLA 270


>gi|153953798|ref|YP_001394563.1| flagellar basal body rod protein FlgG [Clostridium kluyveri DSM
           555]
 gi|219854414|ref|YP_002471536.1| hypothetical protein CKR_1071 [Clostridium kluyveri NBRC 12016]
 gi|146346679|gb|EDK33215.1| FlgG2 [Clostridium kluyveri DSM 555]
 gi|219568138|dbj|BAH06122.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 261

 Score =  131 bits (330), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 46/260 (17%), Positives = 95/260 (36%), Gaps = 20/260 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +     +A  A +++L+++++NM+N +TVG++   V F ++V    +          
Sbjct: 1   MLRAIWNSASAMNAEQEKLNSISNNMANAETVGYKREVVNFQDLVYETLDRNGYPVNDEG 60

Query: 56  -----ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVT 109
                 + V +         GS   TG + + A++G+ +F +    G     R G F V 
Sbjct: 61  QNTINGTGVRTTNWLRDTLQGSLQETGLKANMAIDGEGFFRVTLQNGTQGYERAGNFNVN 120

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT------MGLYSV 163
             G LV   G    +++    + +     + N        +    +         G  +V
Sbjct: 121 SMGELVDPDGNRLEVNLTEEGVNLINSGVLLNNDNFTVDKKGQIYVNVDDNSVLYGKINV 180

Query: 164 DMSQGFVRR--ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221
             + G          +        + +     + +G+LE SN +   E+  MI   + F 
Sbjct: 181 YNAVGQDSMLSIGDNLYLPAENVQVTENQDANILQGYLEQSNVDLGREITDMILAQRAFA 240

Query: 222 SITTLIDENEKSMLEAIRNI 241
                +   ++ M   I N+
Sbjct: 241 LGAKGLTTADE-MWGLINNM 259


>gi|182418329|ref|ZP_02949624.1| flagellar hook protein FlgE [Clostridium butyricum 5521]
 gi|237666973|ref|ZP_04526958.1| flagellar basal body rod protein [Clostridium butyricum E4 str.
           BoNT E BL5262]
 gi|182377711|gb|EDT75255.1| flagellar hook protein FlgE [Clostridium butyricum 5521]
 gi|237658172|gb|EEP55727.1| flagellar basal body rod protein [Clostridium butyricum E4 str.
           BoNT E BL5262]
          Length = 255

 Score =  131 bits (329), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 52/257 (20%), Positives = 112/257 (43%), Gaps = 17/257 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M   F  G +   A ++++  +++++ N+ T G++   + F +++    +          
Sbjct: 1   MFNVFATGKSGMTAYQEKMDYLSNDLVNSTTTGYKGTDIGFKDLMTESLDRKGNPIVNKN 60

Query: 56  ---ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDD 111
               + V  G  Y + + G+ ++TG + D A++G  +FAL+ P   I  TRDG FK+  +
Sbjct: 61  AVNGTGVRIGTNYANNKQGNLLNTGLKTDLAIDGKGYFALQDPDGTISYTRDGNFKIDSN 120

Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV------IATMGLYSVDM 165
           GSLV+ASG    +       +     +  N+   G+      +      + ++ +++   
Sbjct: 121 GSLVTASGVKVYVQYEPGFSEGDPAFDSDNIAIDGQGGISMNIDGNVALVGSIPVFTAIG 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225
            +GFV + N+   P+             +++GFLE SN ++      +I   + F   + 
Sbjct: 181 DKGFVPKGNNMFVPSDDAQITLSDDYD-IRQGFLEASNVDAAEVFSDVILTQRAFQLSSK 239

Query: 226 LIDENEKSMLEAIRNIA 242
            I   +  +   I ++ 
Sbjct: 240 AITTADD-IWSMINSMR 255


>gi|212637786|ref|YP_002314311.1| flagellar basal body rod protein [Shewanella piezotolerans WP3]
 gi|212559270|gb|ACJ31724.1| Flagellar basal body rod protein [Shewanella piezotolerans WP3]
          Length = 244

 Score =  131 bits (329), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 46/241 (19%), Positives = 87/241 (36%), Gaps = 1/241 (0%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M             + +  +  A+N++N DT GF+    + + +      +  Q      
Sbjct: 1   MDRMLYTAATGAARVMEAQAIRANNLANADTTGFKADLERVNAMSVTATGNSLQTRVLAQ 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           +     S++ G+   TG  LD A+     F++ +  G   TR G      +G L      
Sbjct: 61  TQSSGFSQQSGALNPTGRTLDLAINDAGLFSVMTDDGEGYTRSGAIVPDANGQLTLDGRP 120

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
              +D   V  +  +     +        + G +     L  V+     + +   G+   
Sbjct: 121 IAGVDGPIVLPEYRELFVGDDGRLSIVADENGIIEEVGQLKLVNPDMNIMSKGLDGLLYT 180

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
               PL     VTV  GFLE SN  ++ E+   + L+++F     L+    + + EA   
Sbjct: 181 QDRQPLPANDEVTVSSGFLEASNVQAVGELIAAMDLSRQFEIQVKLMKSA-EKLAEAGNR 239

Query: 241 I 241
           +
Sbjct: 240 L 240


>gi|237796094|ref|YP_002863646.1| flagellar hook protein FlgE [Clostridium botulinum Ba4 str. 657]
 gi|229263494|gb|ACQ54527.1| flagellar hook protein FlgE [Clostridium botulinum Ba4 str. 657]
          Length = 332

 Score =  131 bits (329), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 45/329 (13%), Positives = 95/329 (28%), Gaps = 90/329 (27%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50
           M  S   G++   A + +L  V +N++N +T  F++  ++F +++    +          
Sbjct: 1   MLRSMYSGISGLKAQQTKLDVVGNNIANANTTAFKSQSIRFQDMLSQNMSSATGPSANLG 60

Query: 51  --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP------------- 95
             +  Q    V     Y     G+  +TG  LD A++G  +F +                
Sbjct: 61  GTNPRQIGLGVQVAGMYTKFTTGNMQTTGRNLDSAIDGPGFFVVGKGKISDTTTIGDTGD 120

Query: 96  ---------RGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG 146
                      +  TRDG F +  DGSL+++ G   +              ++    +  
Sbjct: 121 NAGAITGGSMEVSFTRDGSFTLGKDGSLITSDGLRVMGYAIEGADITVDAGKMKVGFKNA 180

Query: 147 EISQKGKV-------------------------------------------IATMGLYSV 163
           +   K                                              +  + + S 
Sbjct: 181 DEDPKAITDKLVPLAIPDEIEKGSEKVRVQSFTIDKDGLIVASLVDGTSAALGQIAMASF 240

Query: 164 DMSQGFVRRENSGI-------------SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEM 210
               G  +   +                  +            +  G +E SN +   E 
Sbjct: 241 KNEGGLEKMGKNLYKNSANSGEAIIRSGRGVDAANDNSKGYGDMLNGMIEMSNVDLAEEF 300

Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +MI   + F +   +I   ++ + E + 
Sbjct: 301 TEMIVANRAFQACGKMITTGDEILQELVN 329


>gi|54294164|ref|YP_126579.1| flagellar basal body rod protein FlgF [Legionella pneumophila str.
           Lens]
 gi|53753996|emb|CAH15467.1| flagellar biosynthesis protein FlgF [Legionella pneumophila str.
           Lens]
          Length = 248

 Score =  131 bits (329), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 53/247 (21%), Positives = 111/247 (44%), Gaps = 7/247 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI--SF 58
           M+      ++   +  +R   +A+N++N +T GF+    +   +     N  +Q    SF
Sbjct: 1   MEPILYNSISGGRSDFKRQEIIANNLANINTPGFKADLYQAQTMYMNNANGNNQFSAHSF 60

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSA 117
           +      +    G  I+TG +LD A++GD W A++  +     TR G  ++  +G L++A
Sbjct: 61  ITQNANGVDTSPGEIITTGRDLDVAIDGDGWIAVQDSQGREAYTRGGSLRLNPNGQLITA 120

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV---IATMGLYSVDMSQGFVRREN 174
           SGK  + D   + I   Q  EI + G    +  +G V        +  V + +  + + +
Sbjct: 121 SGKVVLGDGGPISIPPAQSIEIGSDGTISIVPLEGDVKSLAILDRIKLVTLDRNNIYKND 180

Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
            G+        + + +   ++ G LE SN N++ +M  MI   ++F++   L+   + + 
Sbjct: 181 EGLIQLKSGAAIANSNI-KLQSGALEGSNVNAIDQMVAMISAGREFDAQMKLLSTVDDNG 239

Query: 235 LEAIRNI 241
            +  + +
Sbjct: 240 QKLAQLL 246


>gi|32477363|ref|NP_870357.1| FlgF [Rhodopirellula baltica SH 1]
 gi|32447914|emb|CAD77434.1| FlgF [Rhodopirellula baltica SH 1]
 gi|327537336|gb|EGF24069.1| Flagellar basal-body rod FlgF [Rhodopirellula baltica WH47]
          Length = 273

 Score =  131 bits (329), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 51/251 (20%), Positives = 89/251 (35%), Gaps = 14/251 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIK----VKFSE-----VVGAIKND 51
           M     +  A   A   RL  ++ N++N DT GF+  +     +FSE     +V      
Sbjct: 24  MPYGVYLSAAGAQAQNHRLQQISHNLANVDTPGFKPSQTILQARFSELIEEGMVPPGLGG 83

Query: 52  IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA-WFALESPRGIILTRDGRFKVTD 110
            D     V    E     VG+  +TG E DFAL     +F L+     +LTR G F    
Sbjct: 84  ADDIGGGVTIQPEQTQFGVGAIRTTGRETDFALHDKKSFFVLQRGDEQLLTRAGDFMFDS 143

Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170
            G++V++ G   +          P++            + + + +      S       +
Sbjct: 144 TGTMVNSGGDPVLGKGGRPIQIDPRRPFTVGSEGTITQAGETQQLMLAQPASYGD----L 199

Query: 171 RRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
                 +   +    L   S   V  G LE S  +    M +MI  ++ + +   +I   
Sbjct: 200 ANVGGNLFRPLAEFSLVPDSDRNVVAGSLEQSAVSPTGTMMEMIETSRAYEANIQMIKNQ 259

Query: 231 EKSMLEAIRNI 241
           +  +   I  +
Sbjct: 260 DSVLGSLIGRV 270


>gi|301631988|ref|XP_002945073.1| PREDICTED: flagellar basal-body rod protein flgF-like [Xenopus
           (Silurana) tropicalis]
          Length = 430

 Score =  131 bits (329), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 54/228 (23%), Positives = 86/228 (37%), Gaps = 5/228 (2%)

Query: 17  QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76
            R + +++N++N  T GFR     F  V   ++ D      F         +  G    T
Sbjct: 201 HRQAVLSNNLANVSTNGFRAEMSTFRSV--PMQGDGATTRVFALEATSGHVQTPGQVQRT 258

Query: 77  GTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQ 135
           G  LD    G AWFA++        TR G F+VT  G LV+++G   + D  +     P 
Sbjct: 259 GRNLDAMAVGPAWFAVQGLDGTEAYTRAGSFQVTQAGQLVTSTGLPVLSDGGTPIDVPPG 318

Query: 136 KDEIFNVGEKGEISQKGKVIATMGLYSVDMS--QGFVRRENSGISPNIPPTPLEDLSGVT 193
            +              G+  A +G   +        ++R N G+       PL       
Sbjct: 319 AEITLGADGTLTAQTAGQPPAPVGRIKLATPGLDDPLQRGNDGLFRTASGAPLAQDPNAA 378

Query: 194 VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           +  G LE SN N++  M  MI   ++F     L+   E     A + +
Sbjct: 379 LLSGALEGSNVNAVESMVGMIAAARQFEQQMRLLQTAESGDKSAAQLL 426



 Score =  116 bits (289), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 74/242 (30%), Gaps = 51/242 (21%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN--DIDQKISFVAS 61
           SF  GL+   A  + L  +  N++N+ TVGF+  + +F E+V +     +       V  
Sbjct: 2   SFQQGLSGLTAASKNLDVIGHNIANSGTVGFKASRTEFDEMVASAIGSANGTNGGIGVGV 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
             + +++    F    T  D    G        P G ILTR        +G +       
Sbjct: 62  KLDDVTQFGTKFAIAETTQDGYTAGQLTGINIGPDGTILTRYSNGVTRPEGVV------- 114

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
                                                 L S   +QG     N+      
Sbjct: 115 -------------------------------------ALASFRNTQGLSDIGNNLWVETF 137

Query: 182 PPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                      +     ++ G LEDSN +   E+  M+   + + S    I   ++ +  
Sbjct: 138 ESGQPTVGQPTSGSFGALRSGALEDSNVDLTAELVNMMTAQRAYQSNAQTIKTQDQVIST 197

Query: 237 AI 238
            +
Sbjct: 198 LV 199


>gi|168182737|ref|ZP_02617401.1| flagellar hook protein FlgE [Clostridium botulinum Bf]
 gi|182674150|gb|EDT86111.1| flagellar hook protein FlgE [Clostridium botulinum Bf]
          Length = 332

 Score =  131 bits (329), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 45/329 (13%), Positives = 95/329 (28%), Gaps = 90/329 (27%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50
           M  S   G++   A + +L  V +N++N +T  F++  ++F +++    +          
Sbjct: 1   MLRSMYSGISGLKAQQTKLDVVGNNIANANTTAFKSQSIRFQDMLSQNMSSATGPSANLG 60

Query: 51  --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP------------- 95
             +  Q    V     Y     G+  +TG  LD A++G  +F +                
Sbjct: 61  GTNPRQIGLGVQVAGMYTKFTTGNMQTTGRNLDSAIDGPGFFVVGKGKISDTTTIGDTGD 120

Query: 96  ---------RGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG 146
                      +  TRDG F +  DGSL+++ G   +              ++    +  
Sbjct: 121 NAGAITGGSMEVSFTRDGSFTLGKDGSLITSDGLRVMGYAIEGADITVDAGKMKVGFKNA 180

Query: 147 EISQKGKV-------------------------------------------IATMGLYSV 163
           +   K                                              +  + + S 
Sbjct: 181 DEDPKAVTDKLVPLAIPDEIEKGSEKVRVQSFTIDKDGLIVASLVDGTSAALGQIAMASF 240

Query: 164 DMSQGFVRRENSGI-------------SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEM 210
               G  +   +                  +            +  G +E SN +   E 
Sbjct: 241 KNEGGLEKMGKNLYKNSANSGEAIIRSGRGVDAANDNSKGYGDMLNGMIEMSNVDLAEEF 300

Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +MI   + F +   +I   ++ + E + 
Sbjct: 301 TEMIVANRAFQACGKMITTGDEILQELVN 329


>gi|304412507|ref|ZP_07394113.1| fagellar hook-basal body protein [Shewanella baltica OS183]
 gi|307307166|ref|ZP_07586904.1| fagellar hook-basal body protein [Shewanella baltica BA175]
 gi|304349149|gb|EFM13561.1| fagellar hook-basal body protein [Shewanella baltica OS183]
 gi|306910405|gb|EFN40836.1| fagellar hook-basal body protein [Shewanella baltica BA175]
          Length = 244

 Score =  131 bits (329), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 93/242 (38%), Gaps = 3/242 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M+       +  + + +  S  A+N++N +T GF+    + + V    + +         
Sbjct: 1   MEKMLYTAASGAVRILEAQSIRANNLANAETAGFKADLERVNAVPLVAQGNSLNTRVMAQ 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           +     S++ G    TG  LD A+     F++        TR G  +   +G  ++  G+
Sbjct: 61  TESSGFSQQSGVINPTGRSLDLAIRDRGLFSVAVDGAEAYTRSGAIETNVEG-QLTIDGR 119

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ-GFVRRENSGISP 179
             +     + +   +   +   G    +  +G +I  +G   +       +++   G+  
Sbjct: 120 PVLGIDGPIALPEYKDVFVGEDGTVSVLPAEGGIIEEVGRLKLVNPDFALMQKGQDGLLY 179

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
                 +    GV V  GFLE SN  ++ E+   + L+++F     L+    + + EA  
Sbjct: 180 RRDGQAVPQDEGVLVDSGFLESSNVQAVSELIASMDLSRQFEIQVKLMKSA-EKLAEAGN 238

Query: 240 NI 241
            +
Sbjct: 239 RL 240


>gi|90408061|ref|ZP_01216232.1| flagellar basal-body rod protein FlgF [Psychromonas sp. CNPT3]
 gi|90310818|gb|EAS38932.1| flagellar basal-body rod protein FlgF [Psychromonas sp. CNPT3]
          Length = 248

 Score =  131 bits (329), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 50/240 (20%), Positives = 101/240 (42%), Gaps = 10/240 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     I ++        L+  A+N++N +  GF++   +   +      +      F  
Sbjct: 1   MDRLLYISMSGAKENMNALAIHANNLANANKTGFKSSFEQARSM--QAYGEGLPTRVFSL 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119
           +     + E G    T  +LD +++G+ WF ++S  G   +TR G   +  +G L+ ++G
Sbjct: 59  AENPGQNFESGILQMTQRDLDISIKGEGWFMVDSKMGGQAMTRAGGLNINPEGFLIDSTG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL------YSVDMSQGFVRRE 173
               L     PI IP   E FN+ + G +  + +      +        V+ +   + R 
Sbjct: 119 NKV-LSQKGAPIFIPLPVEKFNIRKDGMVEIRPEGAPADAMEEIAQIKLVNPNIRDILRG 177

Query: 174 NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
             G+   I        + V+++ G LE SN N   E+  +I+L ++F+    ++ + E+ 
Sbjct: 178 EDGLYRRIDGNDPIVDAKVSIESGSLEASNVNMSSELTGLINLQRQFDMQVKMMKKAEEM 237


>gi|146307868|ref|YP_001188333.1| flagellar basal body rod protein FlgF [Pseudomonas mendocina ymp]
 gi|145576069|gb|ABP85601.1| flagellar basal-body rod protein FlgF [Pseudomonas mendocina ymp]
          Length = 246

 Score =  131 bits (329), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 49/245 (20%), Positives = 91/245 (37%), Gaps = 6/245 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + +         L   A+N++N  T GFR    +   +   +  +      F  
Sbjct: 1   MDKMLYVSMTGAQNNTLALRAHANNLANVSTSGFRRDFEQARSM--PLFGESYPARVFAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           S +       GS   TG +LD A+ G  W A+++P       R     +   G L + +G
Sbjct: 59  SERPGTDFRAGSLQETGRDLDVAIGGKGWIAVQAPDGSEAYVRTASLNIDALGVLRTGNG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEIS---QKGKVIATMGLYSVDMSQGFVRRENSG 176
              + +   + +   QK EI   G     +       +     +  V+     + +   G
Sbjct: 119 LPVMGNAGPIAVPPEQKVEIGQDGTISIRALGENPNVLAEVDRIKLVNPDPKSLEKGTDG 178

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           +        +E  + V V  GFLE SN N++ EM  ++ L+++F     ++   E +   
Sbjct: 179 LIRVKGQPEVEADATVQVTSGFLEASNVNAVEEMTAILSLSRQFELSVKMMRTAEDNASA 238

Query: 237 AIRNI 241
             R +
Sbjct: 239 MARVL 243


>gi|148926662|ref|ZP_01810343.1| putative flagellar basal-body rod protein [Campylobacter jejuni
           subsp. jejuni CG8486]
 gi|145845181|gb|EDK22276.1| putative flagellar basal-body rod protein [Campylobacter jejuni
           subsp. jejuni CG8486]
          Length = 270

 Score =  131 bits (329), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 50/268 (18%), Positives = 103/268 (38%), Gaps = 25/268 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDID---- 53
           MQ  +       +    +L  + +N++N +T G++   V    F  +    ++++     
Sbjct: 1   MQNGYYQATGGMVTQFNKLDVITNNLANINTSGYKRDDVVIADFKRIFKETQDELPIENH 60

Query: 54  ----------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILT 101
                              +EY    +GS  +T   LD A+  +  F         + LT
Sbjct: 61  TRDASRFVNTTIDRIPQVSQEYTDFSLGSLKATNNPLDLAMTREDAFYLVQTKDGEVRLT 120

Query: 102 RDGRFKVTDDGSLVSASGKYP-----VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156
           +DG F++ D+G LV+  G          +  +  I+IP      +V + G I   G   A
Sbjct: 121 KDGNFQLDDEGYLVNKQGYKVLSSDYFNNPQNADIRIPNGAVQISVDKNGSIEVDGAQNA 180

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
            + +  VD  +   +  ++    +      +  +   +++GF + SN N + EM  +I  
Sbjct: 181 RLFVAQVDDIRALQKDGDNVYKIDDLTRIRDLKNSNAIRQGFSQGSNVNPVTEMVGLIEA 240

Query: 217 TQKFNSITTLIDEN-EKSMLEAIRNIAS 243
            +       ++  + +    EAI  +A+
Sbjct: 241 NRMVEMYQKVMTAHMDDLNQEAINKLAA 268


>gi|315121847|ref|YP_004062336.1| flagellar basal body rod protein FlgG [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495249|gb|ADR51848.1| flagellar basal body rod protein FlgG [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 262

 Score =  131 bits (329), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 45/254 (17%), Positives = 96/254 (37%), Gaps = 22/254 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55
             +F I  A   A +  L  +A+N++N +T G++  + +F++ +   +            
Sbjct: 1   MKAFTIAAAGMSAQQTNLEIIANNIANINTTGYKRARAEFADFLYQAEKAAGSPSQSADQ 60

Query: 56  ---------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGR 105
                     S V           G  + TG  LD AL G  WF +E+P    + TR G 
Sbjct: 61  SVVPEGINIGSGVQISSVRNVYTQGELVHTGNSLDLALVGRGWFQVETPDKTVMYTRAGS 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
           F +   G LV++ G   +  +      +         +      +   + +  + + +  
Sbjct: 121 FNIDSKGQLVTSDGNTLLPGITIPEEARELTVSRSGQIMAVTGKNSDFQPLGQLLIANFV 180

Query: 165 MSQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G     ++ ++             +D     +K+G+LE SN +++ E+ +MI   + 
Sbjct: 181 NEAGLRNIGDNLVTRTSVSGEAIISSPDDAGFAHIKQGYLEASNVDAVKEISEMISAQRA 240

Query: 220 FNSITTLIDENEKS 233
           +   + +I   ++ 
Sbjct: 241 YEMNSKVIQAADEM 254


>gi|225871944|ref|YP_002753398.1| putative flagellar basal-body rod protein FlgG [Acidobacterium
           capsulatum ATCC 51196]
 gi|225793888|gb|ACO33978.1| putative flagellar basal-body rod protein FlgG [Acidobacterium
           capsulatum ATCC 51196]
          Length = 245

 Score =  131 bits (329), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 53/246 (21%), Positives = 99/246 (40%), Gaps = 9/246 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M++ +   L   LA  Q L +VA N++N  T GFR  +  F +V+   + +  Q    V 
Sbjct: 1   MESGYYAALTGLLARSQALDSVASNLANAGTAGFRAQQDYFRDVLAGPRANDSQLDQTVD 60

Query: 61  SGKEYLSK----EVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVS 116
           +             G   +TG  LD A++G  +F +++P G+  TRDGR   +  G L++
Sbjct: 61  NYGVLGGTLLDLAQGPIQATGNPLDLAIQGGGFFEVQTPNGVRYTRDGRLVRSTKGVLIT 120

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
             G   +         I        +GE G IS  G +   + ++    ++         
Sbjct: 121 GDGDPVLNAKGKP---IVLPTGRPVIGEDGTISVDGAIAGKIAVFQFAGARDLEAEGVGL 177

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE-NEKSML 235
             P     P       T+++G LE SN + ++    +I + ++   +   +         
Sbjct: 178 YRPVGKAKPAPATGF-TLRQGALEGSNQDVIHGTMDLIFVQRQAQMMEKALSIFYNDFNK 236

Query: 236 EAIRNI 241
            A +++
Sbjct: 237 TATQDL 242


>gi|302387772|ref|YP_003823594.1| fagellar hook-basal body protein [Clostridium saccharolyticum WM1]
 gi|302198400|gb|ADL05971.1| fagellar hook-basal body protein [Clostridium saccharolyticum WM1]
          Length = 256

 Score =  131 bits (329), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 56/257 (21%), Positives = 105/257 (40%), Gaps = 16/257 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA-----IKNDIDQK 55
           M+ SF IG    L  + +L  V++N++N +TVGF+     FS++V A       N+  + 
Sbjct: 1   MEQSFYIGALGALGQQTKLGIVSNNVANVNTVGFKAQYSVFSDLVHAEMRNTQGNNGAKS 60

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR--GIILTRDGRFK---VTD 110
            S     +         +  TG E D+A+ G+ +F L+ P    +  +RDGRF+   + D
Sbjct: 61  GSGTKVDQTKTDFSAMPYKETGLEHDYAIAGEGFFMLKDPVTGEVSYSRDGRFQLSRMED 120

Query: 111 DGSLVSASGKYPVLDM-----ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
              LV++  K  +          V        E     E+ E+ +       +G+Y+   
Sbjct: 121 KFYLVNSDNKRVLNMDQEEISYDVKPATYPGSEEETEEEETELEEGEHDPRAIGVYTFAR 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225
             G   + ++  S          L    V +  LE+S  +   EM +MI   + ++    
Sbjct: 181 RDGMESQGDNVFSVTEKNGEPILLENAKVVKRALEESGVDFAQEMTRMIEAQRAYSYALK 240

Query: 226 LIDENEKSMLEAIRNIA 242
           ++  +++     I  + 
Sbjct: 241 MVQTSDEV-EATINTLR 256


>gi|261409669|ref|YP_003245910.1| fagellar hook-basal body protein [Paenibacillus sp. Y412MC10]
 gi|261286132|gb|ACX68103.1| fagellar hook-basal body protein [Paenibacillus sp. Y412MC10]
          Length = 293

 Score =  131 bits (329), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 45/291 (15%), Positives = 101/291 (34%), Gaps = 49/291 (16%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRT---IKVKFSEVV---------GAI 48
           M        +  +  EQR +TV  N++N +T G++    ++  F EV+           +
Sbjct: 1   MLRGLYTAASGMMTQEQRHNTVTQNIANVNTTGYKATNSVQRSFPEVLVSMIGGNESSNV 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFAL------------------------ 84
              + +  + V + +       G+   T    DFAL                        
Sbjct: 61  GRKLGKFNTGVYAEESISLYTEGALRETNKTTDFALVSSFTVQNPATGQAYPFDASGRYV 120

Query: 85  ---------EGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQ 135
                        +        +  TR+G F+V+ +G+L+S SG   + +     +    
Sbjct: 121 DENGEVIYRPEGFFTVQNENGDVRYTRNGSFRVSPEGNLLSESGYQVLDNNNRPIVLTGP 180

Query: 136 KDEIFNVGEKGEISQKGKVIATM-GLYSVDMSQGFVRRENSGIS---PNIPPTPLEDLSG 191
             +     +   +   G+    + G+  V    G +R  +       P+     +     
Sbjct: 181 ASDFTVNEQGEIMDAAGRGTGIILGVSIVSQPHGLIREGHGVFRMADPDGEVRFMTPADN 240

Query: 192 VTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
             V++GF+E SN +    M ++    + + +   ++   ++++ +A+  I 
Sbjct: 241 GVVRQGFIEGSNVDPTQSMVELTAALRAYETNQKIVQYYDRTLEKAVNEIG 291


>gi|308273543|emb|CBX30145.1| hypothetical protein N47_D29540 [uncultured Desulfobacterium sp.]
          Length = 226

 Score =  131 bits (328), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 51/240 (21%), Positives = 102/240 (42%), Gaps = 18/240 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M +S    +   L  + R  T+++N++N +T  F+   V F + +   ++ ID       
Sbjct: 1   MISSNYSLVEGSLIQQLRFDTLSNNLANVNTNAFKQDIVSFDQNLSLNRSSID------- 53

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
                     G  + TG   D ALEG  +F +++  GI  +RDG F +  DG LV+ +G 
Sbjct: 54  -------LSSGPIVFTGNAFDVALEGPGFFKIQTASGIKYSRDGAFSLNRDGMLVNRNGD 106

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
             +         I        +G  G+I++ G     + +  +  S+   +   +    +
Sbjct: 107 KVL----GKNGPITLTGNNIVIGSDGQITEDGNPGDKIFVADIKDSKLLKKEGMNYYVYD 162

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
                +     V++K+ ++E SN N   EM +M+   + F SI   +   +++  + + +
Sbjct: 163 GEAKNITSAEKVSIKQSYIEKSNVNVTEEMIRMVETLRTFESIQKALQNTDETTGKMVND 222


>gi|86153287|ref|ZP_01071491.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni HB93-13]
 gi|85843013|gb|EAQ60224.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni HB93-13]
          Length = 270

 Score =  131 bits (328), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 50/268 (18%), Positives = 101/268 (37%), Gaps = 25/268 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDID---- 53
           MQ  +       +    +L  + +N++N +T G++   V    F  +    ++++     
Sbjct: 1   MQNGYYQATGGMVTQFNKLDVITNNLANINTSGYKRDDVVIADFKRIFKETQDELPIENH 60

Query: 54  ----------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILT 101
                              +EY    +GS  +T   LD A+  +  F         + LT
Sbjct: 61  TRDASRFVNTTIDGIPQVSQEYTDFSLGSLKATNNPLDLAMTREDAFYLVQTKDGEVRLT 120

Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQ-----IPQKDEIFNVGEKGEISQKGKVIA 156
           +DG F++ D+G LV+  G   +        Q     IP      +V + G I   G   A
Sbjct: 121 KDGNFQLDDEGYLVNKQGYKVLSSDYFNNPQNAGICIPNGAVQISVDKNGSIEVDGAQNA 180

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
            + +  VD  +   +  ++    +      +  +   +++GF + SN N + EM  +I  
Sbjct: 181 RLFVAQVDDIRALQKDGDNVYKIDDLTRIRDLKNSNAIRQGFSQGSNVNPVTEMVGLIEA 240

Query: 217 TQKFNSITTLIDEN-EKSMLEAIRNIAS 243
            +       ++  + +    EAI  +A+
Sbjct: 241 NRMVEMYQKVMTAHMDDLNQEAINKLAA 268


>gi|57237000|ref|YP_178801.1| flagellar basal-body rod protein [Campylobacter jejuni RM1221]
 gi|86149760|ref|ZP_01067989.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni CF93-6]
 gi|57165804|gb|AAW34583.1| flagellar basal-body rod protein [Campylobacter jejuni RM1221]
 gi|85839578|gb|EAQ56838.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni CF93-6]
 gi|315058160|gb|ADT72489.1| Flagellar basal-body rod protein flgF [Campylobacter jejuni subsp.
           jejuni S3]
          Length = 270

 Score =  131 bits (328), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 50/268 (18%), Positives = 103/268 (38%), Gaps = 25/268 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDID---- 53
           MQ  +       +    +L  + +N++N +T G++   V    F  +    ++++     
Sbjct: 1   MQNGYYQATGGMVTQFNKLDVITNNLANINTSGYKRDDVVIADFKRIFKETQDELPIENH 60

Query: 54  ----------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILT 101
                              +EY    +GS  +T   LD A+  +  F         + LT
Sbjct: 61  TRDASRFVNTTIDRIPQVSQEYTDFSLGSLKATNNPLDLAMTREDAFYLVQTKDGEVRLT 120

Query: 102 RDGRFKVTDDGSLVSASGKYP-----VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156
           +DG F++ D+G LV+  G          +  +  I+IP      +V + G I   G   A
Sbjct: 121 KDGNFQLDDEGYLVNKQGYKVLSSDYFNNPQNAGIRIPNGAVQISVDKNGSIEVDGAQNA 180

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
            + +  VD  +   +  ++    +      +  +   +++GF + SN N + EM  +I  
Sbjct: 181 RLFVAQVDDIRALQKDGDNVYKIDDLTRIRDLKNSNAIRQGFSQGSNVNPVTEMVGLIEA 240

Query: 217 TQKFNSITTLIDEN-EKSMLEAIRNIAS 243
            +       ++  + +    EAI  +A+
Sbjct: 241 NRMVEMYQKVMTAHMDDLNQEAINKLAA 268


>gi|307609978|emb|CBW99507.1| flagellar biosynthesis protein FlgF [Legionella pneumophila 130b]
          Length = 248

 Score =  131 bits (328), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 53/247 (21%), Positives = 110/247 (44%), Gaps = 7/247 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI--SF 58
           M+      ++   +  +R   +A+N++N +T GF+    +   +     N  +Q    SF
Sbjct: 1   MEPILYNSISGSRSDFKRQEIIANNLANINTPGFKADLYQAQTMYMNNANGNNQFSAHSF 60

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSA 117
           +      +    G  I+TG +LD A++GD W A++  +     TR G  ++  +G L++A
Sbjct: 61  ITQNANGIDTSPGEIITTGRDLDVAIDGDGWMAVQDSQGREAYTRGGSLRLNPNGQLITA 120

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV---IATMGLYSVDMSQGFVRREN 174
           SGK  + D   + I   Q  EI + G    +  +G V        +  V + +  + + +
Sbjct: 121 SGKVVLGDGGPISIPPAQSIEIGSDGTISIVPLEGDVKSLAILDRIKLVTLDKNNIYKND 180

Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
            G+          + +   ++ G LE SN N++ +M  MI   ++F++   L+   + + 
Sbjct: 181 EGLIQLKSGAATANSNI-KLQSGALEGSNVNAIDQMVAMISAGREFDAQMKLLSTVDDNG 239

Query: 235 LEAIRNI 241
            +  + +
Sbjct: 240 QKLAQLL 246


>gi|283956106|ref|ZP_06373593.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni 1336]
 gi|283792426|gb|EFC31208.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni 1336]
          Length = 270

 Score =  131 bits (328), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 50/268 (18%), Positives = 103/268 (38%), Gaps = 25/268 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDID---- 53
           MQ  +       +    +L  + +N++N +T G++   V    F  +    ++++     
Sbjct: 1   MQNGYYQATGGMVTQFNKLDVITNNLANINTSGYKRDDVVIADFKRIFKETQDELPIENH 60

Query: 54  ----------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILT 101
                              +EY    +GS  +T   LD A+  +  F         + LT
Sbjct: 61  TRDASRFVNTTIDGIPQVSQEYTDFSLGSLKATNNPLDLAMTREDAFYLVQTKDGEVRLT 120

Query: 102 RDGRFKVTDDGSLVSASGKYP-----VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156
           +DG F++ D+G LV+  G          +  +  I+IP      +V + G I   G   A
Sbjct: 121 KDGNFQLDDEGYLVNKQGYKVLSSDYFNNPQNAGIRIPNGAVQISVDKNGSIEVDGVQNA 180

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
            + +  VD  +   +  ++    +      +  +   +++GF + SN N + EM  +I  
Sbjct: 181 RLFVAQVDDIRALQKDGDNVYKIDDLTRIRDLENSNAIRQGFSQGSNVNPVTEMVGLIEA 240

Query: 217 TQKFNSITTLIDEN-EKSMLEAIRNIAS 243
            +       ++  + +    EAI  +A+
Sbjct: 241 NRMVEMYQKVMTAHMDDLNQEAINKLAA 268


>gi|315453646|ref|YP_004073916.1| putative flagellar basal-body rod protein [Helicobacter felis ATCC
           49179]
 gi|315132698|emb|CBY83326.1| putative flagellar basal-body rod protein [Helicobacter felis ATCC
           49179]
          Length = 271

 Score =  131 bits (328), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 57/269 (21%), Positives = 107/269 (39%), Gaps = 26/269 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M   +       +    RL  +++N++N +T GF+   V   + +   +N  DQ      
Sbjct: 1   MTNGYYDATGGMVTEFNRLDQISNNLANLNTNGFKRDDVVVGDFLHLYQNYRDQLPLQDQ 60

Query: 61  SGK-----------------EYLSKEVGSFISTGTELDFALEG-DAWFALESPRGIILTR 102
           + +                  Y    +G+   T  +LDFAL   +A+FA+++P+GI  TR
Sbjct: 61  TKQAAKYLNRNLNRVPIISERYTDYSLGAVQKTDGDLDFALSDPNAYFAVQTPQGIAFTR 120

Query: 103 DGRFKVTDDGSLVSASGKYP---VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG 159
           DG F +   G L +  G +        +   IQ+     +            G      G
Sbjct: 121 DGSFTIDSQGFLSTKEGYHVLSREGLESGGGIQMLPGARVSVGNSGAVFFHDGNEEVPGG 180

Query: 160 LYSVD--MSQGFVRRENSGISPNIPPTPLEDLS--GVTVKRGFLEDSNANSMYEMGQMIH 215
             +V    SQ  +++  + +         E +      V +GFLE SN N++ EM ++I 
Sbjct: 181 NIAVVGFQSQKLLKKIGNNLYTYPQERMAERVELNAPIVHQGFLEKSNVNAVREMTRLIE 240

Query: 216 LTQKFNSITTLIDEN-EKSMLEAIRNIAS 243
             +  +  + ++  + +    EAI  +A+
Sbjct: 241 ANRLVDMYSKVLRTHMDDMHAEAISKLAT 269


>gi|160939652|ref|ZP_02087000.1| hypothetical protein CLOBOL_04544 [Clostridium bolteae ATCC
           BAA-613]
 gi|158437443|gb|EDP15207.1| hypothetical protein CLOBOL_04544 [Clostridium bolteae ATCC
           BAA-613]
          Length = 246

 Score =  130 bits (327), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 52/249 (20%), Positives = 94/249 (37%), Gaps = 12/249 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIK---VKFSEVVGAIKND----ID 53
           M + F    +  L  ++ L+  A+N++N  T G++  +     F + +    N     + 
Sbjct: 1   MFSGFYTAASGMLMNQRSLNMAANNIANVKTSGYKPKRLVKTTFDQQLVREMNGRTEGLG 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113
           Q  +     +E  +   G    TG   D A+ GD +F ++   G  LTR+G F   D+G+
Sbjct: 61  QGSTISVGTREMTTHGQGPIEDTGKTYDLAINGDGFFVIQGENGQYLTRNGHFTRDDEGN 120

Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRE 173
           L+       + D       +   +E F VG  G I              V  +   +   
Sbjct: 121 LMLPGVGQLMGDG----GPVYVDEEGFRVGADGIIYDNEDGALDQIQIVVPDNYDSLEFY 176

Query: 174 NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           ++G         L  +   TV +G LE S  N   EM + + + + F S    +   ++ 
Sbjct: 177 DNGTYGAGAGVELSQV-YPTVYQGKLEQSGVNLNNEMTRAMEVQRAFQSCGKALTIIDQM 235

Query: 234 MLEAIRNIA 242
             +    I 
Sbjct: 236 NQKTANEIG 244


>gi|57167708|ref|ZP_00366848.1| flagellar basal-body rod protein (flgG) [Campylobacter coli RM2228]
 gi|305433214|ref|ZP_07402370.1| flagellar basal-body rod protein [Campylobacter coli JV20]
 gi|57020830|gb|EAL57494.1| flagellar basal-body rod protein (flgG) [Campylobacter coli RM2228]
 gi|304443915|gb|EFM36572.1| flagellar basal-body rod protein [Campylobacter coli JV20]
          Length = 270

 Score =  130 bits (327), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 49/268 (18%), Positives = 102/268 (38%), Gaps = 25/268 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDID---- 53
           MQ  +       +    +L  + +N++N +T G++   V    F  +    ++++     
Sbjct: 1   MQNGYYQATGGMVTQFNKLDVITNNLANINTSGYKRDDVVIADFKRIFKETQDELPIENH 60

Query: 54  ----------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILT 101
                              + Y    +GS  +T   LD A+  +  F         I L+
Sbjct: 61  TRDASRFVNTTIDGVPQVSQGYTDFSLGSLKTTNNPLDLAITREDAFYLVQTKDGEIRLS 120

Query: 102 RDGRFKVTDDGSLVSASGKY-----PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156
           +DG F++ ++G LV+  G          +  +  I++P      NV + G I   G   A
Sbjct: 121 KDGNFQLNEEGYLVNKQGYRILSSDYFNNPQNAGIRLPNGAVYINVDKNGSIEVDGVQNA 180

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
            + +  VD  +   +  ++    +      +  +   V++GF + SN N + EM  +I  
Sbjct: 181 RLFIAQVDDIRALQKDGDNVYRIDDLTRIRDLDNSNAVRQGFSQGSNVNPVTEMVGLIEA 240

Query: 217 TQKFNSITTLIDEN-EKSMLEAIRNIAS 243
            +       ++  + +    EAI  +A+
Sbjct: 241 NRMVEMYQKVMTAHMDDLNQEAINKLAA 268


>gi|319790435|ref|YP_004152068.1| flagellar hook-basal body protein [Thermovibrio ammonificans HB-1]
 gi|317114937|gb|ADU97427.1| flagellar hook-basal body protein [Thermovibrio ammonificans HB-1]
          Length = 238

 Score =  130 bits (327), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 51/239 (21%), Positives = 93/239 (38%), Gaps = 11/239 (4%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTI-KVKFSEVVGAIKNDIDQKISFVASGK 63
             +  A      ++L T  +N++N +T GF+ I + + S+ V    +D    + F     
Sbjct: 8   IYLLAAGGERALEQLDTTTNNLANVNTPGFKRIIEEEMSQHVPPNGSDAYNMLIFPRFKS 67

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPV 123
             +    G    T +  D AL+G  +FA+++P G + TR+G F +  +G LV A+G   +
Sbjct: 68  TQVVLSEGPLRKTDSPFDLALKGRGFFAVKTPNGELYTRNGHFTLNANGVLVDANGNPVL 127

Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183
               S        +    V   G + +  + +  + +      +        G+      
Sbjct: 128 --DISGKEIALSGNGKVTVTPDGLVFEGDRQVGVLKIVDFAKVKPVGNSYYQGVGAPT-- 183

Query: 184 TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
                 +   V +GFLE SN N + EM  +I   ++F     L     +  L     I 
Sbjct: 184 -----ATDAEVLQGFLEGSNVNPVKEMVNLIEAQRRFEIYGNLTRALAQVDLRT-NEIG 236


>gi|254457917|ref|ZP_05071344.1| flagellar basal body rod protein [Campylobacterales bacterium GD 1]
 gi|207085310|gb|EDZ62595.1| flagellar basal body rod protein [Campylobacterales bacterium GD 1]
          Length = 273

 Score =  130 bits (327), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 56/270 (20%), Positives = 108/270 (40%), Gaps = 28/270 (10%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDIDQ--- 54
           MQ+ +    A  +    RL T+A+N++N +TVGF+   +    F  +    ++++     
Sbjct: 1   MQSGYYSSAAGMVTQFNRLDTIANNLANVNTVGFKEDNLVVGDFQRLYKEARDELPNKNH 60

Query: 55  -----------KISFVASGKEYLSKEVGSFISTGTELDFALEGDA-WFALESPRGIILTR 102
                                Y    VG+   T  ++DFAL  +  +F +++P+G+ LTR
Sbjct: 61  SEDGAQFLNRAMTKAPQVVDSYTDFTVGNTQQTDNDMDFALSREGLFFLVKTPQGVRLTR 120

Query: 103 DGRFKVTDDGSLVSASGKYPVLDMA---------SVPIQIPQKDEIFNVGEKGEISQKGK 153
           DG F   D+G LV+ +G   + +           +    + + D+   + +    S K  
Sbjct: 121 DGSFTKDDEGRLVTKNGYEVLPNDYFEAGGNITFNDDENVIKVDKHGQIYKNIPNSVKLV 180

Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQM 213
             + + +   D      +  N+    +         +   V +GF+E SN N++  M QM
Sbjct: 181 QGSHLFVAQPDNVALLKKEGNNLYRYDGTTDLKSLDNTEAVMQGFVEKSNVNAVKMMTQM 240

Query: 214 IHLTQKFNSITTLID-ENEKSMLEAIRNIA 242
           I   +        +  + +    +AI  IA
Sbjct: 241 IETNRLVGMYQKAMSVQMDDMNNDAINKIA 270


>gi|86151576|ref|ZP_01069790.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni 260.94]
 gi|157414984|ref|YP_001482240.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|85841205|gb|EAQ58453.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni 260.94]
 gi|157385948|gb|ABV52263.1| putative flagellar basal-body rod protein [Campylobacter jejuni
           subsp. jejuni 81116]
 gi|307747621|gb|ADN90891.1| Flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni M1]
 gi|315931896|gb|EFV10851.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           327]
          Length = 270

 Score =  130 bits (327), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 50/268 (18%), Positives = 103/268 (38%), Gaps = 25/268 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDID---- 53
           MQ  +       +    +L  + +N++N +T G++   V    F  +    ++++     
Sbjct: 1   MQNGYYQATGGMVTQFNKLDVITNNLANINTSGYKRDDVVIADFKRIFKETQDELPIENH 60

Query: 54  ----------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILT 101
                              +EY    +GS  +T   LD A+  +  F         + LT
Sbjct: 61  TRDASRFVNTTIDGIPQVSQEYTDFSLGSLKATNNPLDLAMTREDAFYLVQTKDGEVRLT 120

Query: 102 RDGRFKVTDDGSLVSASGKYP-----VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156
           +DG F++ D+G LV+  G          +  +  I+IP      +V + G I   G   A
Sbjct: 121 KDGNFQLDDEGYLVNKQGYKVLSSDYFNNPQNAGIRIPNGAVQISVDKNGSIEVDGAQNA 180

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
            + +  VD  +   +  ++    +      +  +   +++GF + SN N + EM  +I  
Sbjct: 181 RLFVAQVDDIRALQKDGDNVYKIDDLTRIRDLENSNAIRQGFSQGSNVNPVTEMVGLIEA 240

Query: 217 TQKFNSITTLIDEN-EKSMLEAIRNIAS 243
            +       ++  + +    EAI  +A+
Sbjct: 241 NRMVEMYQKVMTAHMDDLNQEAINKLAA 268


>gi|322378390|ref|ZP_08052845.1| flagellar basal-body rod protein (flgG) [Helicobacter suis HS1]
 gi|322380258|ref|ZP_08054478.1| flagellar basal-body rod protein (flgG) [Helicobacter suis HS5]
 gi|321147295|gb|EFX41975.1| flagellar basal-body rod protein (flgG) [Helicobacter suis HS5]
 gi|321149203|gb|EFX43648.1| flagellar basal-body rod protein (flgG) [Helicobacter suis HS1]
          Length = 286

 Score =  130 bits (327), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 54/268 (20%), Positives = 110/268 (41%), Gaps = 26/268 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M + +       ++   +L  +++N++N +T GF+   V   + +   +N  D+      
Sbjct: 16  MTSGYYAATGGMVSEFNKLDQISNNLANLNTPGFKRDDVVVGDFLRLYQNYRDKLPLHDQ 75

Query: 61  SGK-----------------EYLSKEVGSFISTGTELDFALEG-DAWFALESPRGIILTR 102
           + +                  Y    +G    T  ELDFAL   +A+FA+++P+G+  TR
Sbjct: 76  TKQAAKYLNRNLNRVPIITERYTDYSLGPMQKTDNELDFALSDSNAYFAVQTPQGVAFTR 135

Query: 103 DGRFKVTDDGSLVSASGKYPV---LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG 159
           DG F +   G L +  G + +          IQ+     +          ++G      G
Sbjct: 136 DGSFTIDSQGFLSTKEGYHVLSRGGIENQAGIQMLPGSSVSVNPNGAIFFRQGDEEVPGG 195

Query: 160 LYSVDM--SQGFVRRENS--GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIH 215
             ++    SQ  +++  +     P        +L+   V++ FLE SN N++ EM ++I 
Sbjct: 196 NLAIVGFESQKLLKKIGNNLYTYPQEKMAERVELNAPIVRQHFLEKSNVNAVLEMTRLIE 255

Query: 216 LTQKFNSITTLIDEN-EKSMLEAIRNIA 242
             +  +  + ++  + +    EAI  +A
Sbjct: 256 ANRLVDMYSKVLKTHMDDMHTEAINKLA 283


>gi|88596898|ref|ZP_01100134.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni 84-25]
 gi|218562336|ref|YP_002344115.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|88190587|gb|EAQ94560.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni 84-25]
 gi|112360042|emb|CAL34834.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|284925953|gb|ADC28305.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni IA3902]
 gi|315926811|gb|EFV06185.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           DFVF1099]
          Length = 270

 Score =  130 bits (327), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 50/268 (18%), Positives = 103/268 (38%), Gaps = 25/268 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDID---- 53
           MQ  +       +    +L  + +N++N +T G++   V    F  +    ++++     
Sbjct: 1   MQNGYYQATGGMVTQFNKLDVITNNLANINTSGYKRDDVVIADFKRIFKETQDELPIENH 60

Query: 54  ----------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILT 101
                              +EY    +GS  +T   LD A+  +  F         + LT
Sbjct: 61  TRDASRFVNTTIDGIPQVSQEYTDFSLGSLKATNNPLDLAMTREDAFYLVQTKDGEVRLT 120

Query: 102 RDGRFKVTDDGSLVSASGKYP-----VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156
           +DG F++ D+G LV+  G          +  +  I+IP      +V + G I   G   A
Sbjct: 121 KDGNFQLDDEGYLVNKQGYKVLSSDYFNNPQNAGIRIPNGAVQISVDKNGSIEVDGAQNA 180

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
            + +  VD  +   +  ++    +      +  +   +++GF + SN N + EM  +I  
Sbjct: 181 RLFVAQVDDIRALQKDGDNVYKIDDLTRIRDLKNSNAIRQGFSQGSNVNPVTEMVGLIEA 240

Query: 217 TQKFNSITTLIDEN-EKSMLEAIRNIAS 243
            +       ++  + +    EAI  +A+
Sbjct: 241 NRMVEMYQKVMTAHMDDLNQEAINKLAA 268


>gi|56421866|ref|YP_149184.1| flagellar hook-basal body protein [Geobacillus kaustophilus HTA426]
 gi|56381708|dbj|BAD77616.1| flagellar hook-basal body protein [Geobacillus kaustophilus HTA426]
          Length = 273

 Score =  130 bits (327), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 58/273 (21%), Positives = 107/273 (39%), Gaps = 31/273 (11%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S         AL+QRL T++ N++N++TVGF+  +  F+E++    + +        
Sbjct: 1   MLRSMLTAANTMNALQQRLDTISHNIANSNTVGFKRREASFAELLTQQIDRLPNDEAPRQ 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEG-DAWFA-----LESPRGIILTR 102
                +  +        L  + G+ + TG  LDFAL   + WF            I  TR
Sbjct: 61  TPEGVRYGNGARLASTMLITKQGALVETGRRLDFALTDENQWFRVRLADQNGAETIGYTR 120

Query: 103 DGRFKVTDDGSL--VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK-----VI 155
            G F +        ++ S    VLD  + PI +P       +   G ++           
Sbjct: 121 AGNFSLAPMNGQLALTTSDGLFVLDERNAPIVLPADAHDVQMSPTGTLTATNTDGRVVAR 180

Query: 156 ATMGLYSVDMSQGFVRRENSGIS-PNIPPTPLEDL----SGVTVKRGFLEDSNANSMYEM 210
             +G+  +   Q    R  +  + PN+P    E        ++VK+G LE +N +   EM
Sbjct: 181 VNLGVTMIRRPQLLEARGGNVYALPNVPGAAEELNGSLRGQISVKQGALEQANVDLGEEM 240

Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
             ++  ++ +      +  +E+ +   I  + S
Sbjct: 241 VGLMATSRAYQLNARAVSISEQMLG-LINGMRS 272


>gi|205355539|ref|ZP_03222310.1| putative flagellar basaL body rod protein [Campylobacter jejuni
           subsp. jejuni CG8421]
 gi|205346773|gb|EDZ33405.1| putative flagellar basaL body rod protein [Campylobacter jejuni
           subsp. jejuni CG8421]
          Length = 270

 Score =  130 bits (327), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 50/268 (18%), Positives = 103/268 (38%), Gaps = 25/268 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDID---- 53
           MQ  +       +    +L  + +N++N +T G++   V    F  +    ++++     
Sbjct: 1   MQNGYYQATGGMVTQFNKLDVITNNLANINTSGYKRDDVVIADFKRIFKETQDELPIENH 60

Query: 54  ----------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILT 101
                              +EY    +GS  +T   LD A+  +  F         + LT
Sbjct: 61  TRDASRFVNTTIDGIPQVSQEYTDFSLGSLKATNNPLDLAMTREDAFYLVQTKDGEVRLT 120

Query: 102 RDGRFKVTDDGSLVSASGKYP-----VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156
           +DG F++ D+G LV+  G          +  +  I+IP      +V + G I   G   A
Sbjct: 121 KDGNFQLDDEGYLVNKQGYKVLSSDYFNNPQNAGIRIPNSAVQISVDKNGSIEVDGAQNA 180

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
            + +  VD  +   +  ++    +      +  +   +++GF + SN N + EM  +I  
Sbjct: 181 RLFVAQVDDIRALQKDGDNVYKIDDLTRIRDLKNSNAIRQGFSQGSNVNPVTEMVGLIEA 240

Query: 217 TQKFNSITTLIDEN-EKSMLEAIRNIAS 243
            +       ++  + +    EAI  +A+
Sbjct: 241 NRMVEMYQKVMTAHMDDLNQEAINKLAA 268


>gi|121612923|ref|YP_001000393.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|167005336|ref|ZP_02271094.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|87249505|gb|EAQ72465.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni 81-176]
          Length = 270

 Score =  130 bits (327), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 49/268 (18%), Positives = 102/268 (38%), Gaps = 25/268 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDID---- 53
           MQ  +       +    +L  + +N++N +T G++   V    F  +    ++++     
Sbjct: 1   MQNGYYQATGGMVTQFNKLDVITNNLANINTSGYKRDDVVIAGFKRIFKETQDELPIENH 60

Query: 54  ----------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILT 101
                              +EY    +G   +T   LD A+  +  F         + LT
Sbjct: 61  TRDASRFVNTTIDGIPQVSQEYTDFSLGFLKATNNPLDLAMTREDAFYLVQTKDGEVRLT 120

Query: 102 RDGRFKVTDDGSLVSASGKYP-----VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156
           +DG F++ D+G LV+  G          +  +  I+IP      +V + G I   G   A
Sbjct: 121 KDGNFQLDDEGYLVNKQGYKVLSSDYFNNPQNAGIRIPNGAVQISVDKNGSIEVDGAQNA 180

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
            + +  VD  +   +  ++    +      +  +   +++GF + SN N + EM  +I  
Sbjct: 181 RLFVAQVDDIRALQKDGDNVYKIDDLTRIRDLENSNAIRQGFSQGSNVNPVTEMVGLIEA 240

Query: 217 TQKFNSITTLIDEN-EKSMLEAIRNIAS 243
            +       ++  + +    EAI  +A+
Sbjct: 241 NRMVEMYQKVMTAHMDDLNQEAINKLAT 268


>gi|91794994|ref|YP_564645.1| flagellar basal-body rod FlgF [Shewanella denitrificans OS217]
 gi|91716996|gb|ABE56922.1| Flagellar basal-body rod FlgF [Shewanella denitrificans OS217]
          Length = 244

 Score =  130 bits (327), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 45/242 (18%), Positives = 90/242 (37%), Gaps = 3/242 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M        +    + +  S  A+N++N +T GF+    +   +              V 
Sbjct: 1   MDKMLYTAASGASRIMEAQSIRANNLANAETTGFKADLERVKSMALPGVEASLSTRVLVQ 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           +     S++ G    TG  LD A+     F +    G   TR G      +G  ++ +G+
Sbjct: 61  TQSNGFSQQSGEMNHTGRNLDMAIRDRGLFTVMVDGGEAYTRAGAMIADAEG-QLTVNGR 119

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ-GFVRRENSGISP 179
             +     + +   +   +   G    +  +G VI  +G   +   +   + +   G+  
Sbjct: 120 PVLGIDGPMVLPEHKDLFVGEDGTISVLPAEGGVIQEVGRLKMVNPELNELTKGADGLLY 179

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            I    L    GV V  G+LE SN  ++ E+   + L+++F     L+    + + EA  
Sbjct: 180 PIAAGVLAADDGVQVDSGYLESSNVQAVSELIASMDLSRQFEIQVKLMKSA-EKLAEAGN 238

Query: 240 NI 241
            +
Sbjct: 239 RL 240


>gi|28869143|ref|NP_791762.1| flagellar basal-body rod protein FlgF [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|213967580|ref|ZP_03395728.1| flagellar basal-body rod protein FlgF [Pseudomonas syringae pv.
           tomato T1]
 gi|301385715|ref|ZP_07234133.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           tomato Max13]
 gi|302060072|ref|ZP_07251613.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           tomato K40]
 gi|302134831|ref|ZP_07260821.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           tomato NCPPB 1108]
 gi|28852383|gb|AAO55457.1| flagellar basal-body rod protein FlgF [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|213927881|gb|EEB61428.1| flagellar basal-body rod protein FlgF [Pseudomonas syringae pv.
           tomato T1]
 gi|331017023|gb|EGH97079.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 246

 Score =  130 bits (327), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 49/245 (20%), Positives = 95/245 (38%), Gaps = 6/245 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + ++            A+N++N  T GF     +   +   +  ++    ++  
Sbjct: 1   MDKLLYVAMSGASENAIAQKAHANNLANVSTNGFMRDLEQARSM--PVFGEVMPSRAYAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119
           S +       G+ + TG ELD A++GD W A+++P G    TR     +   G L   SG
Sbjct: 59  SERPGTDFSGGAMVETGRELDIAIKGDGWIAVQTPDGGEAYTRSSGMNIDALGVLRDGSG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176
              + +   + +   Q+ EI   G     S          +     V      + +   G
Sbjct: 119 LPVMGNGGPIAVPPQQQIEIGADGTISIRSLGESPQVMAQVDRIKLVKPDLKTMEKGPDG 178

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           +       P +  + V V+ GFL+ SN N++ EM  ++ L+++F     ++   E+    
Sbjct: 179 LIHTKSGRPADADATVQVESGFLQASNVNAVEEMTSVLALSRQFELHVKMMKTAEEDDQS 238

Query: 237 AIRNI 241
             R +
Sbjct: 239 MARVL 243


>gi|120597306|ref|YP_961880.1| flagellar basal-body rod protein FlgF [Shewanella sp. W3-18-1]
 gi|146294549|ref|YP_001184973.1| flagellar basal-body rod protein FlgF [Shewanella putrefaciens
           CN-32]
 gi|120557399|gb|ABM23326.1| flagellar basal-body rod protein FlgF [Shewanella sp. W3-18-1]
 gi|145566239|gb|ABP77174.1| flagellar basal-body rod protein FlgF [Shewanella putrefaciens
           CN-32]
          Length = 244

 Score =  130 bits (327), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 45/242 (18%), Positives = 93/242 (38%), Gaps = 3/242 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M+       +  + + +  S  A+N++N +T GF+    + + V  A + +         
Sbjct: 1   MEKMLYTAASGAVRILEAQSIRANNLANAETAGFKADLERVNAVALAAQGNSLNTRVMAQ 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           +     S + G    TG  LD A+     F +    G   TR G      +G  ++  G+
Sbjct: 61  TENSGFSHQSGVINPTGRTLDLAIRDRGLFTVAVEGGEAYTRSGALIANAEG-ELTIDGR 119

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ-GFVRRENSGISP 179
             + +   + +   +   I   G    +  +G +I  +G   +       +++   G+  
Sbjct: 120 PVLGNDGPIVLPEHKDLFIGEDGTVSVLPSEGGIIEEVGRLKLVNPDLALMQKGQDGLLY 179

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
                 +    GV V  GFLE SN  ++ E+   + L+++F     L+    + + EA  
Sbjct: 180 GRDGQLMAQDDGVLVDSGFLESSNVQAVSELIASMDLSRQFEIQVKLMKSA-EKLAEAGN 238

Query: 240 NI 241
            +
Sbjct: 239 RL 240


>gi|85710164|ref|ZP_01041229.1| flagellar hook protein [Erythrobacter sp. NAP1]
 gi|85688874|gb|EAQ28878.1| flagellar hook protein [Erythrobacter sp. NAP1]
          Length = 279

 Score =  130 bits (327), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 44/275 (16%), Positives = 80/275 (29%), Gaps = 39/275 (14%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV--GAIKNDIDQKISFVAS 61
           SF   L+     E  L  +++N++N +T GF+    +FS++V  G   +           
Sbjct: 2   SFFTSLSGMRNAETDLRVISNNIANAETAGFKKSSAQFSDLVASGGSTDPRTTPGIGATV 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPR--GIILTRDGRFKVTDDGSLVSASG 119
            +      +G    TG  LD A+ G  +    +     I  TR+G  ++   G+L  A G
Sbjct: 62  SRISQDFGLGQLEQTGRALDIAINGGGFITSANAISGDINFTRNGNLEIVASGTLQDAFG 121

Query: 120 KYPVL------------------------------DMASVPIQIPQKDEIFNVGEKGEIS 149
                                                           +   V       
Sbjct: 122 DRIQGFPVDGAGTPTSNVPADITIPTSRTVTDPGTGATQDFQLTSVGFDARGVLTATYSD 181

Query: 150 QKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNA 204
              + +A + L +   + G      +           E       +   +  G LE SN 
Sbjct: 182 GFSEPVAMLSLATFPANGGLRSIGQTKWEATAESGDPEFGQPGVGNFGAIATGTLERSNV 241

Query: 205 NSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +   EM  ++   + F +    ID         + 
Sbjct: 242 DLAEEMVSLLTAQRNFQANARAIDTATAITQTVLN 276


>gi|57505520|ref|ZP_00371447.1| flagellar basal-body rod protein (flgG) [Campylobacter upsaliensis
           RM3195]
 gi|57016067|gb|EAL52854.1| flagellar basal-body rod protein (flgG) [Campylobacter upsaliensis
           RM3195]
          Length = 270

 Score =  130 bits (327), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 53/268 (19%), Positives = 101/268 (37%), Gaps = 25/268 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDID---- 53
           MQ  +       +    +L  + +N++N +T G++   V    F  +    K+++     
Sbjct: 1   MQNGYYQATGGMVTQFNKLEVITNNLANINTSGYKRDDVVIADFKRIFKETKDELPIENH 60

Query: 54  ----------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDA--WFALESPRGIILT 101
                              ++Y     GS  +T   LDFA+  +   +        + LT
Sbjct: 61  TKDAARFVNSTIDRVPQISQDYTDFSTGSLKATNNPLDFAMTREDTFYLVQTKNGELRLT 120

Query: 102 RDGRFKVTDDGSLVSASGKYP-----VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156
           +DG F++ D+G LV+  G          +     I I       N  + G IS  G+  A
Sbjct: 121 KDGNFQLDDEGYLVNKQGYKVLSSNYFNNPEGAGIIIGNGAVHINADKNGNISVDGEDNA 180

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
            + +  VD  +   +  ++    N      +     +VK+GF + SN N + EM  +I  
Sbjct: 181 RLFIAQVDDVRALEKDGDNTYKINDLTRIRDLEISNSVKQGFSQGSNVNPVSEMVGLIEA 240

Query: 217 TQKFNSITTLIDEN-EKSMLEAIRNIAS 243
            +       ++  + +    +AI  +AS
Sbjct: 241 NRMVEMYQKVMTAHMDDLNQDAINKLAS 268


>gi|226315010|ref|YP_002774906.1| flagellar hook-basal body protein [Brevibacillus brevis NBRC
           100599]
 gi|226097960|dbj|BAH46402.1| putative flagellar hook-basal body protein [Brevibacillus brevis
           NBRC 100599]
          Length = 276

 Score =  130 bits (326), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 58/276 (21%), Positives = 105/276 (38%), Gaps = 35/276 (12%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             S NI  +A   ++Q L   A+N+SN DT+G++     FSE++    N+          
Sbjct: 1   MQSLNISTSAMRGIQQALDNTANNLSNIDTIGYKRRVASFSELLTDSMNEQPATDNQNRN 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF----------ALESPRGI 98
                +  S    G   L    GS   T    D  +EGD +F           +      
Sbjct: 61  TPMGIRIGSGAHLGMTKLDLGQGSLKQTDVPTDVLIEGDGYFLVTRKIKDANNITVDEES 120

Query: 99  ILTRDGRFKV---TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI 155
             TR+G FK+    D G ++  S  + + D     I  P+  +  ++   G  S  G   
Sbjct: 121 RFTRNGSFKLSYDDDKGYVLHTSSGHILTDENGANIVFPEPVKNISISPDGTFSADGMPA 180

Query: 156 ATM-GLYSVDMSQGFVRRENSGI-------SPNIPPTPLEDLSGVTVKRGFLEDSNANSM 207
               G++ V+      +   +         +           +GVT+++G LE SN +  
Sbjct: 181 PVKIGVWDVENPDQLKQVGENLFDAELAFGAGPQSKYTSAYDNGVTLRQGALESSNVSMT 240

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
            EM Q++++ + +   +  I  +++ M      + S
Sbjct: 241 EEMSQLVNIQRAYQLNSRAIGISDQMMG-IANQLRS 275


>gi|313905150|ref|ZP_07838519.1| fagellar hook-basal body protein [Eubacterium cellulosolvens 6]
 gi|313470053|gb|EFR65386.1| fagellar hook-basal body protein [Eubacterium cellulosolvens 6]
          Length = 253

 Score =  130 bits (326), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 51/253 (20%), Positives = 104/253 (41%), Gaps = 13/253 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDIDQK-- 55
           M   F    +  +  +++L+T+++NM+N +T G++   +    F E +        +K  
Sbjct: 1   MYQGFYELTSGLITQQRKLNTISNNMANVETAGYKRDTMTVSTFQEEMLIRTGQTAKKNP 60

Query: 56  ------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109
                     A+ + Y     GSF  T  + DFA+ GD +F +++P GI  TR+G F V 
Sbjct: 61  TDLAVTTPIAAADQTYTDFTQGSFDQTDGKYDFAISGDGFFTIQTPNGIQYTRNGAFSVN 120

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169
             G L   +    V           +   + + G     +  G V   + +   + +   
Sbjct: 121 AQGILCLDNIGTVVGANGGTIRITNENFVVDDYGRIMSAAGDGTVYGQLRITGFEDTGTL 180

Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
            + +N     + P    +      V  G+LE SNA+ + +M +M+   +   S   ++  
Sbjct: 181 HKEDNGMF--SAPGGGQDLTGRTRVFNGYLEASNADMIGQMTEMMSSQRALQSAAQMLKM 238

Query: 230 NEKSMLEAIRNIA 242
            ++ + +A  ++ 
Sbjct: 239 YDQVLSKASSDVG 251


>gi|315637965|ref|ZP_07893151.1| flagellar basal-body rod protein [Campylobacter upsaliensis JV21]
 gi|315482000|gb|EFU72618.1| flagellar basal-body rod protein [Campylobacter upsaliensis JV21]
          Length = 270

 Score =  130 bits (326), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 52/268 (19%), Positives = 101/268 (37%), Gaps = 25/268 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDID---- 53
           MQ  +       +    +L  + +N++N +T G++   V    F  +    K+++     
Sbjct: 1   MQNGYYQATGGMVTQFNKLEVITNNLANINTSGYKRDDVVIADFKRIFKETKDELPIENH 60

Query: 54  ----------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDA--WFALESPRGIILT 101
                              ++Y     GS  +T   LDFA+  +   +        + LT
Sbjct: 61  TKDAARFVNSTIDRVPQISQDYTDFSTGSLKATNNPLDFAMTREDTFYLVQTKNGELRLT 120

Query: 102 RDGRFKVTDDGSLVSASGKYP-----VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156
           +DG F++ D+G LV+  G          +     I I       N  + G IS  G+  A
Sbjct: 121 KDGNFQLDDEGYLVNKQGYKVLSSNYFNNPEGAGIIIGNGAVHINADKNGNISVDGEDNA 180

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
            + +  VD  +   +  ++    +      +     +VK+GF + SN N + EM  +I  
Sbjct: 181 RLFIAQVDDVRALEKDGDNTYKIDDLTRIRDLEISNSVKQGFSQGSNVNPVSEMVGLIEA 240

Query: 217 TQKFNSITTLIDEN-EKSMLEAIRNIAS 243
            +       ++  + +    +AI  +AS
Sbjct: 241 NRMVEMYQKVMTAHMDDLNQDAINKLAS 268


>gi|283953937|ref|ZP_06371466.1| putative flagellar basal-body rod protein [Campylobacter jejuni
           subsp. jejuni 414]
 gi|283794542|gb|EFC33282.1| putative flagellar basal-body rod protein [Campylobacter jejuni
           subsp. jejuni 414]
          Length = 270

 Score =  130 bits (326), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 50/268 (18%), Positives = 103/268 (38%), Gaps = 25/268 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDID---- 53
           MQ  +       +    +L  + +N++N +T G++   V    F  +    ++++     
Sbjct: 1   MQNGYYQATGGMVTQFNKLDVITNNLANINTSGYKRDDVVIADFKRIFKETQDELPIENH 60

Query: 54  ----------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILT 101
                              +EY    +GS  +T   LD A+  +  F         + LT
Sbjct: 61  TRDASRFVNTTIDGIPQVSQEYTDFSLGSLKATNNPLDLAMTREDAFYLVQTKDGEVRLT 120

Query: 102 RDGRFKVTDDGSLVSASGKYP-----VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156
           +DG F++ D+G LV+  G          +  +  I+IP      +V + G I   G   A
Sbjct: 121 KDGNFQLDDEGYLVNKQGYKVLSSNYFNNPQNAGIRIPNGAIQISVDKNGGIEVDGVQNA 180

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
            + +  VD  +   +  ++    +      +  +   +++GF + SN N + EM  +I  
Sbjct: 181 RLFVAQVDDIRALQKDGDNVYKIDDLTRIRDLENSNAIRQGFSQGSNVNPVTEMVGLIEA 240

Query: 217 TQKFNSITTLIDEN-EKSMLEAIRNIAS 243
            +       ++  + +    EAI  +A+
Sbjct: 241 NRMVEMYQKVMTAHMDDLNQEAINKLAA 268


>gi|149908758|ref|ZP_01897419.1| Hypothetical FlgF flagellar basal-body rod protein [Moritella sp.
           PE36]
 gi|149808300|gb|EDM68239.1| Hypothetical FlgF flagellar basal-body rod protein [Moritella sp.
           PE36]
          Length = 240

 Score =  130 bits (326), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 46/243 (18%), Positives = 90/243 (37%), Gaps = 5/243 (2%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
                  L+     +  ++  A+N++N +T GF+        V   I+    +      S
Sbjct: 1   MKLLYTALSGAEQSQTAMNIRANNLANVNTNGFKADID--RAVAYKIEGAGYETRYLSQS 58

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGK 120
                +   G    TG  LD A++G+ + A+ +P      TR G   +  +G   S +G 
Sbjct: 59  AASGTNFSAGKLEKTGRSLDIAIQGEGYIAVRTPGGAEAYTRAGSMTLDSEGRA-SINGN 117

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
             V + A +     Q  EI + G    I+  G  +    +  +    G + +   G+   
Sbjct: 118 AVVANGAQLTFPEYQSIEIGSDGTVTAITLGGAQVQVGQIKLIKPEAGSMVKGQDGLLHL 177

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
                      V +  GFLE SN N++ E+   + + ++F     ++   +    +    
Sbjct: 178 KAGAVGNRAEDVALVSGFLEGSNVNAVTELVSSMMVNRQFELQIKMMKTADTLAQKG-NQ 236

Query: 241 IAS 243
           + S
Sbjct: 237 LIS 239


>gi|310644367|ref|YP_003949126.1| flagellar basal body rod protein [Paenibacillus polymyxa SC2]
 gi|309249318|gb|ADO58885.1| Flagellar basal body rod protein [Paenibacillus polymyxa SC2]
          Length = 294

 Score =  130 bits (326), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 48/292 (16%), Positives = 102/292 (34%), Gaps = 50/292 (17%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTI---KVKFSEVVGAIKNDIDQKIS 57
           M        A  +  ++R  TV  N++N +T G++     +  F E++ ++         
Sbjct: 1   MLRGLYTAAAGMMTQQRRHDTVTQNIANMNTTGYKQENSVQRSFPEMLISMTGGNPDNPD 60

Query: 58  --------FVASGKEYLSKEVGSFISTGTELDFALEGDA--------------------- 88
                    V + +       G+   +G   DFAL+ +                      
Sbjct: 61  RTVGKLNTGVFAEESLSPYIQGALKDSGQTTDFALQSNINVNDPATGRPMAFDQAGKFIN 120

Query: 89  ------------WFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQK 136
                       +   ++   +  TRDG F+V   G+L+S++G   +    +        
Sbjct: 121 ANGEVTYRPEAFFTVRDNNGNVRYTRDGHFQVNGTGALLSSTGSAVLDTNGNPIQLTGSV 180

Query: 137 DEIFNVGEKGEISQKGKVI--ATMGLYSVDMSQGFVRRENSGISPN----IPPTPLEDLS 190
             +        +  +   +   T+G+  +D     VR  N     N         +    
Sbjct: 181 SALKVNERGQLVDSQSNQLLGTTLGISVIDRPYQLVREGNGNFRLNDTDGATARMMTAND 240

Query: 191 GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            V+V++G+LE SN ++   M  M+   + + +   +I   +KS+ +A+  + 
Sbjct: 241 TVSVRQGYLEVSNVDAAQSMVDMMAALRAYEANQKVIQFYDKSLDKAVNEVG 292


>gi|308071139|ref|YP_003872744.1| flagellar basal body rod protein [Paenibacillus polymyxa E681]
 gi|305860418|gb|ADM72206.1| Flagellar basal body rod protein [Paenibacillus polymyxa E681]
          Length = 294

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 49/292 (16%), Positives = 106/292 (36%), Gaps = 50/292 (17%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTI---KVKFSEVVGAIKNDIDQKI- 56
           M        A  +  ++R  TV  N++N +T G++     +  F E++ ++         
Sbjct: 1   MLRGLYTAAAGLMTQQRRHDTVTQNIANMNTTGYKQENSVQRSFPEMLISMTGGNPDNPG 60

Query: 57  -------SFVASGKEYLSKEVGSFISTGTELDFALEGDA--------------------- 88
                  + V + +       G+   +G   DFA++ +                      
Sbjct: 61  RTVGKLNTGVFAEESLSPYIQGALKDSGQATDFAIQSNINVNDPATGQPMAFDQAGKFIN 120

Query: 89  ------------WFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQI--P 134
                       +   +S   +  TRDG F+V   G+L+S++G   +    +        
Sbjct: 121 ANGEVTYRPEAFFTVRDSNGNVRYTRDGHFQVNGAGALLSSTGSAVLDTNGNPIQLTGAV 180

Query: 135 QKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN----IPPTPLEDLS 190
            + ++   GE  +      +  T+G+  +D     +R  N     N         +    
Sbjct: 181 SELKVNERGELVDSQSNQTLGTTLGISVIDRPYQLIREGNGNFRLNDTDGATARMMTAND 240

Query: 191 GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            V+V++G+LE SN ++   M  M+   + + +   +I   +KS+ +A+  + 
Sbjct: 241 AVSVRQGYLEVSNVDASQSMVDMMAALRAYEANQKVIQFYDKSLDKAVNEVG 292


>gi|157959901|ref|YP_001499935.1| flagellar basal-body rod protein FlgF [Shewanella pealeana ATCC
           700345]
 gi|157844901|gb|ABV85400.1| flagellar basal-body rod protein FlgF [Shewanella pealeana ATCC
           700345]
          Length = 241

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 49/239 (20%), Positives = 92/239 (38%), Gaps = 3/239 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
                 +    + +  +  A+N++N DT GF+    + +  V A   D  Q      +  
Sbjct: 1   MLYTAASGASRVMEAQAIRANNLANADTTGFKADLERVNAKVIAPIGDSLQTRVLAQTQG 60

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPV 123
              S++ G+   TG  LD A+     F++ +  G   TR G       G  ++  G+   
Sbjct: 61  SGFSRQSGTLNPTGRTLDLAINNAGLFSVMTAEGEGYTRAGAMTADATG-QLTLDGRPVA 119

Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ-GFVRRENSGISPNIP 182
                + +   ++  I + G    I+    VI  +G   +       + +   G+     
Sbjct: 120 GLAGPIVLPEYRELFIGDDGRINIIADADGVIEEVGQLKLVNPDIALMSKGLDGLLYPQD 179

Query: 183 PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
             PL     VTV  GFLE SN  ++ E+   + L+++F     L+    + + EA   +
Sbjct: 180 RQPLPASEEVTVSSGFLEASNVQAVGELIAAMDLSRQFEVQVKLMKSA-EKLAEAGNRL 237


>gi|224370761|ref|YP_002604925.1| FlgF [Desulfobacterium autotrophicum HRM2]
 gi|223693478|gb|ACN16761.1| FlgF [Desulfobacterium autotrophicum HRM2]
          Length = 226

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 49/228 (21%), Positives = 88/228 (38%), Gaps = 19/228 (8%)

Query: 15  LEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFI 74
            E++L   +++++N DT GF+   V F  +  A  N                        
Sbjct: 15  QERKLEVTSNHLANVDTAGFKKDVVSFDSMFKAALN---------------TDLTQAGVK 59

Query: 75  STGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIP 134
            TG  LD AL  + +F +E+P G+  TR+G F +  D  LV  +G   +         I 
Sbjct: 60  HTGNPLDLALSDEGFFKVETPSGVRYTRNGVFSLNADNVLVDQNGDAVL----GQNGPIT 115

Query: 135 QKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTV 194
                  +   GEI   G VI  + + + D      +   +              + V V
Sbjct: 116 ITAGTVEINGTGEIRGDGAVIDQLDIVTFDTLDLLQKEGANNFVFTGDTNLEVAPANVGV 175

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            +G LE S+  ++ EM  MI   + + +   ++   ++   +AI ++ 
Sbjct: 176 VQGSLELSSVKAVEEMVNMIDHHRMYETFQKMMMTFDEVDDKAINSLG 223


>gi|85859195|ref|YP_461397.1| flagellar basal-body rod protein [Syntrophus aciditrophicus SB]
 gi|85722286|gb|ABC77229.1| flagellar basal-body rod protein [Syntrophus aciditrophicus SB]
          Length = 255

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 48/227 (21%), Positives = 85/227 (37%), Gaps = 8/227 (3%)

Query: 16  EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIS 75
             +L   A+N++N  T GF+   V+F   +           +             G+   
Sbjct: 34  MAKLDCSANNIANVSTPGFK---VEFLNYLMRDSGRSSNDKAPSYDELLTRDYSSGALQR 90

Query: 76  TGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQ 135
           T   L+ AL G+ +F +++ +G+  TR G F +     LV+ SG   +         I  
Sbjct: 91  TDNPLEVALLGEGFFIIQTAKGVAYTRRGDFTLNMKRELVTKSGDPVL----GKTGTIVL 146

Query: 136 KDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVK 195
             E   + E G +      +  + + S    +        GI  +      ++     V 
Sbjct: 147 NGEDVRIDESGNVHIGENQVGQLKIVSFKNPEVLTSS-GEGIFRDEGKGIFQENFTPKVV 205

Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            G LE SN +++ EM QMI L + F +   LI   ++    +   I 
Sbjct: 206 YGSLELSNVSAIKEMIQMIDLQRTFETYQKLIHSIDEQDKLSAGRIG 252


>gi|94495411|ref|ZP_01301991.1| flagellar basal-body rod protein FlgG [Sphingomonas sp. SKA58]
 gi|94424799|gb|EAT09820.1| flagellar basal-body rod protein FlgG [Sphingomonas sp. SKA58]
          Length = 281

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 44/277 (15%), Positives = 93/277 (33%), Gaps = 41/277 (14%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--ISFVAS 61
           SF + L+     +  LS +++N++N ++  F+  K +F ++  A       +     V  
Sbjct: 2   SFYVSLSGLKGAQADLSAISNNVANVNSTAFKKSKAQFGDIFAASPMQTTHQVAGQGVRV 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG- 119
                    G+  +T   LD A+ G+ +F ++     I  TR+G F V +D   V  +G 
Sbjct: 62  QGITQQFTQGTIETTDKTLDLAITGEGFFTVKGEDGTISYTRNGAFSVDNDRFAVDTTGS 121

Query: 120 ----------------------KYPVLDMASVPIQIPQKDEIFNVGEKG----------E 147
                                     L    +P     + +   +   G           
Sbjct: 122 RIQVFAVDPETGDLTTPPTSATGPGDLTDLQIPTTYNNEADGAQLTSVGVSKEGLVSAIY 181

Query: 148 ISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDS 202
                  +  + + S +  +G  ++ ++  +  +                +V  G LE S
Sbjct: 182 ADGSTVYLGQVAMASFNSLEGLRQQGDAHWTSTVESGNPILGTANQGMFGSVNSGSLERS 241

Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           N +   E+ Q+I   + F + +  I+         + 
Sbjct: 242 NVDITDELVQLIAAQRNFQANSKAIEAANTLTTTIVN 278


>gi|310644366|ref|YP_003949125.1| fagellar hook-basal body protein [Paenibacillus polymyxa SC2]
 gi|309249317|gb|ADO58884.1| Fagellar hook-basal body protein [Paenibacillus polymyxa SC2]
          Length = 275

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 53/276 (19%), Positives = 102/276 (36%), Gaps = 34/276 (12%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S    + +  +++QRL  +ADN++N +TVG+++ +  F +V+  ++           
Sbjct: 1   MNNSMIGAMVSMASVQQRLDLIADNIANVNTVGYKSKQGSFEDVLANVQQQPSTYLQNGR 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107
                      V +     + E G    TG   D A++G+A F ++       TRDG F 
Sbjct: 61  AMPLGYNLGYGVKTTAIMKNMEQGPLKETGLPTDLAIQGNALFEIQGNGQKAWTRDGGFH 120

Query: 108 V------TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL- 160
                   +   L +A G   + +               N   +  I   G    T+G  
Sbjct: 121 FIPDPNDNETMMLTTAEGYSVLDNNDIPVTAPAGSKVAINSDGELLIRANGTGAPTVGQR 180

Query: 161 ---YSVDMSQGFVRRENSGISPN----------IPPTPLEDLSGVTVKRGFLEDSNANSM 207
                V   +G  +R+++                        + V+V+ G+LE+SN N  
Sbjct: 181 IKLMDVQRPEGLQQRDDNLFVLANGVTEADVFGAAGVAGAVPTDVSVRSGYLEESNVNLA 240

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
            EM  M+ + + +      +  ++  M     N+ +
Sbjct: 241 GEMTDMMQVQRMYQMAARALTSSDTMM-NLANNLRA 275


>gi|157164118|ref|YP_001467097.1| flagellar basal-body rod protein [Campylobacter concisus 13826]
 gi|112799948|gb|EAT97292.1| flagellar basal-body rod protein [Campylobacter concisus 13826]
          Length = 269

 Score =  129 bits (325), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 44/266 (16%), Positives = 103/266 (38%), Gaps = 24/266 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDID---- 53
           MQ  +    A  +    RL+ +++N++N +T+G++   V    F+ +    ++++     
Sbjct: 1   MQNGYYQATAGMVTQFNRLNVISNNLANVNTIGYKRNDVVIGDFARIFKETQDELPLKNH 60

Query: 54  ----------QKISFVASGKEYLSKEVGSFISTGTELDFALEG-DAWFALESPRGIILTR 102
                              +EY     G F  +   LDFA++  DA+F +++P G+ L++
Sbjct: 61  TKDGAKFLNRTLDRVPQVSEEYTDFSAGGFKYSSNTLDFAIKREDAFFLVDTPNGVKLSK 120

Query: 103 DGRFKVTDDGSLVSASGKYPVLDMA-----SVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157
           +G F +  DG +V+  G   +                 + E+    + G +       + 
Sbjct: 121 NGSFSLDGDGYIVTKEGYRVLPSGYEAQNPGQRGIQVPQGEVLTGDKNGNLYSNNNQFSK 180

Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217
             +      +   +  ++           E     +V +G+ + SN N + EM  +I   
Sbjct: 181 FYIAQPREIRDLKKVGDNLFETRNFDDITELDEADSVMQGYAQMSNVNPVLEMVGLIETQ 240

Query: 218 QKFNSITTLIDENE-KSMLEAIRNIA 242
           +  +    ++  +      +A++ +A
Sbjct: 241 RLVDMYQKVMTSHMTDLNQDAVQKLA 266


>gi|330967092|gb|EGH67352.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 246

 Score =  129 bits (325), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 49/245 (20%), Positives = 94/245 (38%), Gaps = 6/245 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + ++            A+N++N  T GF     +   +   +  ++    ++  
Sbjct: 1   MDKLLYVAMSGASENAIAQKAHANNLANVSTNGFMRDLEQARSM--PVFGEVMPSRAYAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119
           S +       G+ + TG ELD A++GD W A+++P G    TR     +   G L   SG
Sbjct: 59  SERPGTDFSGGAMVETGRELDIAIKGDGWIAVQTPDGGEAYTRSSGMNIDALGVLRDGSG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176
              + +   + +   Q+ EI   G     S          +     V      + +   G
Sbjct: 119 LPVMGNGGPIAVPPQQQIEIGADGTISIRSLGESPQVMAQVDRIKLVKPDLKTMEKGPDG 178

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           +       P    + V V+ GFL+ SN N++ EM  ++ L+++F     ++   E+    
Sbjct: 179 LIHTKSGQPAAADATVQVESGFLQASNVNAVEEMTSVLALSRQFELHVKMMKTAEEDDQS 238

Query: 237 AIRNI 241
             R +
Sbjct: 239 MARVL 243


>gi|315929130|gb|EFV08357.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           305]
          Length = 270

 Score =  129 bits (325), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 50/267 (18%), Positives = 102/267 (38%), Gaps = 25/267 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDID---- 53
           MQ  +       +    +L  + +N++N +T G++   V    F  +    ++++     
Sbjct: 1   MQNGYYQATGGMVTQFNKLDVITNNLANINTSGYKRDDVVIADFKRIFKETQDELPIENH 60

Query: 54  ----------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILT 101
                              +EY    +GS  +T   LD A+  +  F         + LT
Sbjct: 61  TRDASRFVNTTIDGIPQVSQEYTDFSLGSLKATNNPLDLAMTREDAFYLVQTKDGEVRLT 120

Query: 102 RDGRFKVTDDGSLVSASGKYP-----VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156
           +DG F++ D+G LV+  G          +  +  I+IP      +V + G I   G   A
Sbjct: 121 KDGNFQLDDEGYLVNKQGYKVLSSDYFNNPQNAGIRIPNGAVQISVDKNGSIEVDGAQNA 180

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
            + +  VD  +   +  ++    +      +  +   +++GF + SN N + EM  +I  
Sbjct: 181 RLFVAQVDDIRALQKDGDNVYKIDDLTRIRDLKNSNAIRQGFSQGSNVNPVTEMVGLIEA 240

Query: 217 TQKFNSITTLIDEN-EKSMLEAIRNIA 242
            +       ++  + +    EAI  +A
Sbjct: 241 NRMVEMYQKVMTAHMDDLNQEAINKLA 267


>gi|195953934|ref|YP_002122224.1| flagellar basal body rod protein [Hydrogenobaculum sp. Y04AAS1]
 gi|195933546|gb|ACG58246.1| flagellar basal body rod protein [Hydrogenobaculum sp. Y04AAS1]
          Length = 253

 Score =  129 bits (325), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 49/253 (19%), Positives = 93/253 (36%), Gaps = 22/253 (8%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV--------GAIKNDIDQKI 56
             +  +     ++RL  VA+N++N DT GF+   +              G   ++     
Sbjct: 8   MYVLASGMSLEQRRLDVVANNIANADTPGFKKDFLSALAYYTPDATKEPGNAPDNPSNNY 67

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLV 115
            +    K Y +   G    T   LD A+ G  +F + + +  I   R G F++  +G LV
Sbjct: 68  VYPIMEKIYTNYTEGPIKKTDNPLDLAINGKGFFKVMNDKGEIFYQRRGDFQLDKNGYLV 127

Query: 116 SASGKYPVLDMASVPI------QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169
           +  G   +               I    +          ++    + T+GL  +   +  
Sbjct: 128 NHYGMKVLGPKNQPIQIPPIATSIHISPQGNVFITTQGTNETPSQVGTIGLVDLTNPE-- 185

Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
             +  + +      TP    +  T+ +G LE SN N + EM Q+I L++ +     L+  
Sbjct: 186 --KAGNDLYTAQNATP---DTTSTLIQGALEGSNVNPVREMVQLIDLSKAYQVYGNLVKG 240

Query: 230 NEKSMLEAIRNIA 242
            E +  +   N  
Sbjct: 241 LETTQSKVSNNFG 253


>gi|251778946|ref|ZP_04821866.1| flagellar hook-basal body complex protein FlhP [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
 gi|243083261|gb|EES49151.1| flagellar hook-basal body complex protein FlhP [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
          Length = 256

 Score =  129 bits (325), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 48/257 (18%), Positives = 103/257 (40%), Gaps = 17/257 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M   F    +   A +++L  +++++ NT T G+++  V+FS+++    +          
Sbjct: 1   MFNIFANAQSGMSAYQEKLDYLSNDLVNTSTTGYKSTDVQFSDLLTESLDRKGTPLVNKD 60

Query: 56  ---ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDD 111
               + V  G +Y     G+ ++TG + D A++G  +FA       I  TRDG  K+  +
Sbjct: 61  AINGTGVKLGMDYRKDTQGNLLTTGVKTDIAIDGKGYFASAQNDGTIAYTRDGNLKIDSN 120

Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV------IATMGLYSVDM 165
           G+LV A G    +       +   K    ++   GE     KV      +  + +++   
Sbjct: 121 GTLVDARGNKIYIQYEGGMSEGNPKLSSEDISIDGEGGISTKVDGQYVKVGQIPVFTAVG 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225
            + F+    +          +   +   +++G LE SN ++      +I   + F   + 
Sbjct: 181 DKAFIA-IGNNYFVASDDAQIALSNDYNIEQGMLEGSNVDTSEIFTDIISTQRAFQLSSK 239

Query: 226 LIDENEKSMLEAIRNIA 242
            I   ++     I ++ 
Sbjct: 240 GITTADEV-WGMINSMR 255


>gi|296135672|ref|YP_003642914.1| flagellar basal-body rod protein FlgF [Thiomonas intermedia K12]
 gi|295795794|gb|ADG30584.1| flagellar basal-body rod protein FlgF [Thiomonas intermedia K12]
          Length = 245

 Score =  129 bits (325), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 49/246 (19%), Positives = 102/246 (41%), Gaps = 9/246 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M T   I      A+ ++ +   +N++N +T G+R  + +F  +   +  +     ++  
Sbjct: 1   MDT-LWIAATGARAVLRQQAVTTNNLANVNTTGYRGEQAQFRAL--PVYGNALPTSAYTT 57

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
                 + + G    TG  LD A+ G  W A+++P      TR+G  +V+  G L ++ G
Sbjct: 58  VQGNSANLQEGPINHTGRNLDVAIRGSGWIAVQAPNGDTAYTRNGDLQVSASGILSTSDG 117

Query: 120 KYPVL----DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
           +  +      ++  P++  Q      +      SQ   ++    +  V+     ++R   
Sbjct: 118 RPVLGQSGAPISVPPLESVQIGADGTISGVPVGSQPNALVVINRIQLVNPPPAQMQRGAD 177

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
           G+  +    P      V +  G LE SN N +  M Q++  T+ F   T L+   +++  
Sbjct: 178 GLFRDTQG-PAPADGNVQLAVGALEGSNVNPVQAMIQILDNTRAFEMQTKLMQTVDQNHQ 236

Query: 236 EAIRNI 241
            A + +
Sbjct: 237 AATQLL 242


>gi|188589304|ref|YP_001920228.1| flagellar basal body rod protein FlgG [Clostridium botulinum E3
           str. Alaska E43]
 gi|188499585|gb|ACD52721.1| flagellar hook-basal body complex protein FlhP [Clostridium
           botulinum E3 str. Alaska E43]
          Length = 256

 Score =  129 bits (325), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 47/248 (18%), Positives = 100/248 (40%), Gaps = 16/248 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M   F    +   A +++L  +++++ NT T G+++  V+FS+++    +          
Sbjct: 1   MFNIFANAQSGMNAYQEKLDYLSNDLVNTSTTGYKSTDVQFSDLLTESLDRKGTPLVNKD 60

Query: 56  ---ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDD 111
               + V  G +Y     G+ ++TG + D A++G  +FA       I  TRDG  K+  +
Sbjct: 61  AINGTGVKLGMDYRKDTQGNLLTTGVKTDIAIDGKGYFASAQNDGTIAYTRDGNLKIDSN 120

Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV------IATMGLYSVDM 165
           G+LV A G    +       +   K    ++   GE     KV      +  + +++   
Sbjct: 121 GTLVDARGNKIYIQYEGGMSEGNPKLSSEDISIDGEGGISTKVDGQYVKVGQIPVFTAVG 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225
            + F+    +          +   +   +++G LE SN ++      +I   + F   + 
Sbjct: 181 DKAFIA-IGNNYFVASDDAQIALSNDYNIEQGMLEGSNVDTAEIFTDIISTQRAFQLSSK 239

Query: 226 LIDENEKS 233
            I   ++ 
Sbjct: 240 GITTADEV 247


>gi|226950067|ref|YP_002805158.1| flagellar hook protein FlgE [Clostridium botulinum A2 str. Kyoto]
 gi|226841875|gb|ACO84541.1| flagellar hook protein FlgE [Clostridium botulinum A2 str. Kyoto]
          Length = 334

 Score =  129 bits (324), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 44/331 (13%), Positives = 92/331 (27%), Gaps = 92/331 (27%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50
           M  S   G++   A + RL  V +N++N +T  F++  ++F +++    +          
Sbjct: 1   MLRSMYSGISGLKAQQTRLDIVGNNIANANTTAFKSQSIRFQDMLSQNMSSATGPSANLG 60

Query: 51  --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP------------- 95
             +  Q    V     +     G+  +TG  LD A++G  +F +                
Sbjct: 61  GTNPRQVGLGVQVAGIFTKFTTGNMQTTGRNLDMAIDGPGFFIVGKGKFSDTTTISTSGD 120

Query: 96  ---------RGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG 146
                      +  T+DG F + +DGSL+++ G   +                       
Sbjct: 121 NEGAINGGTMEVSFTKDGSFNLDEDGSLITSDGLRIMGYAIESADITKDATTGKIKVGFK 180

Query: 147 EISQKGKVI---------------------------------------------ATMGLY 161
              +  K +                                               + + 
Sbjct: 181 NADEDPKAVTDKLVPLAIPDEIEKGSEKVRVQSFTIDKDGLIVASLVDGTSAALGQIAMA 240

Query: 162 SVDMSQGFVRRENSGI-------------SPNIPPTPLEDLSGVTVKRGFLEDSNANSMY 208
           S     G  +   +                               +  G +E SN +   
Sbjct: 241 SFKNEGGLEKMGKNLYRNSANSGEAIIRSGRGTDADKDNSKGYGDMLNGMIEMSNVDLAE 300

Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           E  +MI   + F +   +I   ++ + E + 
Sbjct: 301 EFTEMIVANRAFQACGKMITTGDEILQELVN 331


>gi|253702499|ref|YP_003023688.1| hypothetical protein GM21_3913 [Geobacter sp. M21]
 gi|251777349|gb|ACT19930.1| protein of unknown function DUF1078 domain protein [Geobacter sp.
           M21]
          Length = 294

 Score =  129 bits (324), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 41/290 (14%), Positives = 92/290 (31%), Gaps = 50/290 (17%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
           ++   G++  L   + ++ + +N+SN +T+G++  +  FS+++     +  Q    V   
Sbjct: 5   SALYTGVSGLLQNGEAMNVIGNNISNVNTIGYKGARTLFSDMLSQNVGNNSQIGKGVQMQ 64

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWF---------ALESPRGIILTRDGRFKVTDDGS 113
                   GS  S+    D A++G+++F          +       L+R G F+   +  
Sbjct: 65  VVQNVFSQGSTQSSENVTDLAIQGNSFFALKPSTAAAPVARQSDAFLSRAGAFQTDSNLY 124

Query: 114 LVSASGKYPVLDMASVPIQ----------------IPQKDEIFNVGEKGEISQKGKVIAT 157
           LV+  G   +    +                    I     I  +   G           
Sbjct: 125 LVNPDGYQVLDTAGNPIQFLDTKAAPTTDFGKVLSIDNTGLITYLATDGITQNYYSASGA 184

Query: 158 MGLY---------------SVDMSQGFVRRENSGISPNIPP----------TPLEDLSGV 192
           +G+                +   + G  +   S                      +    
Sbjct: 185 VGVATTPAAATAAEKIAVVTAADTTGLKKVGGSLYQATTDAGVSTAAFSQAANKPNGVSE 244

Query: 193 TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           T+    LE S  +   E  +MI   + +++ +  I  +++   E +  I 
Sbjct: 245 TILSNTLEQSTVDLANEFVKMITTQRAYSANSKTITTSDQMTQEVLNLIR 294


>gi|332187894|ref|ZP_08389627.1| flagellar hook-basal body s family protein [Sphingomonas sp. S17]
 gi|332012055|gb|EGI54127.1| flagellar hook-basal body s family protein [Sphingomonas sp. S17]
          Length = 251

 Score =  129 bits (324), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 48/245 (19%), Positives = 74/245 (30%), Gaps = 12/245 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M            +     S +A+NM+N  T+GFR  +V F  +         +     A
Sbjct: 1   MDKLVYTAATGMRSHMAAQSAIANNMANASTIGFRADRVVFDRIDLKGGGAAFEARMPTA 60

Query: 61  SGKEYLSKEVGSFISTGTELDFAL-EGDAWFALESPR-GIILTRDGRFKVTDDGSLVSAS 118
                  +  G+   TG  LD A+    AW A+++P      TR G  +VT  G L +  
Sbjct: 61  EEVTDADRAPGTVQHTGNPLDVAIATSSAWLAVQAPDGSEAYTRRGDLEVTASGVLQTGD 120

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF-------VR 171
           G   +                  V   G +S             V               
Sbjct: 121 GYPVIG---QNGPITVPPYNSLAVSPDGTVSIIPLGAGPDTQAQVIDRMKLADARVSQTV 177

Query: 172 RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
           +    +        L      TV+ G LE SN N    +  MI   + +     L+ E +
Sbjct: 178 KGLDNLLRVKGGGALPQDMDATVQSGALEGSNVNMAQTLVDMIENQRSYEVQANLMKEAK 237

Query: 232 KSMLE 236
                
Sbjct: 238 SMDEN 242


>gi|330875985|gb|EGH10134.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 246

 Score =  129 bits (324), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 49/245 (20%), Positives = 94/245 (38%), Gaps = 6/245 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + ++            A+N++N  T GF     +   +   +  ++    ++  
Sbjct: 1   MDKLLYVAMSGASENAIAQKAHANNLANVSTNGFMRDLEQARSM--PVFGEVMPSRAYAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119
           S +       G+ + TG ELD A++GD W A+++P G    TR     +   G L   SG
Sbjct: 59  SERPGTDFSGGAMVQTGRELDIAIKGDGWIAVQTPDGGEAYTRSSGMNIDALGVLRDGSG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176
              + +   + +   Q+ EI   G     S          +     V      + +   G
Sbjct: 119 LPVMGNGGPIAVPPQQQIEIGADGTISIRSLGESPQVMAQVDRIKLVKPDLKTMEKGPDG 178

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           +       P    + V V+ GFL+ SN N++ EM  ++ L+++F     ++   E+    
Sbjct: 179 LIHTKSGQPAAADATVQVESGFLQASNVNAVEEMTSVLALSRQFELHVKMMKTAEEDDQS 238

Query: 237 AIRNI 241
             R +
Sbjct: 239 MARVL 243


>gi|153952418|ref|YP_001398358.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           doylei 269.97]
 gi|152939864|gb|ABS44605.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           doylei 269.97]
          Length = 270

 Score =  129 bits (324), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 49/268 (18%), Positives = 102/268 (38%), Gaps = 25/268 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDID---- 53
           MQ  +       +    +L  + +N++N +T G++   V    F  +    ++++     
Sbjct: 1   MQNGYYQATGGMVTQFNKLDVITNNLANINTSGYKRDDVVIADFKRIFKETQDELPIENR 60

Query: 54  ----------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDA--WFALESPRGIILT 101
                              +EY    +GS  +T   LD A+  +   +        + LT
Sbjct: 61  TRDASRFVNTTIDGIPQVSQEYTDFSLGSLKATNNPLDLAMTREDTFYLVQTKDGEVRLT 120

Query: 102 RDGRFKVTDDGSLVSASGKYP-----VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156
           +DG F++ D+G LV+  G          +  +  I+IP      +V + G I   G   A
Sbjct: 121 KDGNFQLDDEGYLVNKQGYKVLSSDYFNNPQNAGIRIPNGAVQISVDKNGSIEVDGAQNA 180

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
            + +  VD  +   +  ++    +         +   +++GF + SN N + EM  +I  
Sbjct: 181 RLFVAQVDDIRALQKDGDNVYKIDDLTRIRYLENSNAIRQGFSQGSNVNPVTEMVGLIEA 240

Query: 217 TQKFNSITTLIDEN-EKSMLEAIRNIAS 243
            +       ++  + +    EAI  +A+
Sbjct: 241 NRMVEMYQKVMTAHMDDLNQEAINKLAA 268


>gi|300854216|ref|YP_003779200.1| putative flagellar hook protein FlgE [Clostridium ljungdahlii DSM
           13528]
 gi|300434331|gb|ADK14098.1| predicted flagellar hook protein FlgE [Clostridium ljungdahlii DSM
           13528]
          Length = 323

 Score =  129 bits (324), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 47/320 (14%), Positives = 98/320 (30%), Gaps = 81/320 (25%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S    ++     +Q+L+  +DN++N+ T GF++  + F +++    +D         
Sbjct: 1   MLPSLYTAISGLRVNQQKLNVTSDNIANSSTTGFKSKNMIFEDMLSQNLSDPSAPVDGGL 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELD-FALEGDAWFALESPRGI-------- 98
                 Q    V           GS  +T   LD  A +G ++F +     +        
Sbjct: 61  GGINARQSGLGVKVAGINTDFTAGSSQTTNRSLDFMANKGGSYFVVSPDGDVSNANGGNA 120

Query: 99  --------ILTRDGRFKVTDDGSLVSASGKYPVLD------------------------- 125
                     TRDG F + + G+L++  G + +                           
Sbjct: 121 SDTTSKSYYYTRDGAFTLDEAGNLLTQDGYHVMGYNVDDKTGAITDTASGTDTSNIVPPK 180

Query: 126 --------------MASVPIQIPQKDEIFNVGEKGEISQK--------GKVIATMGLYSV 163
                           +   Q    +E       G  +             +  + L S 
Sbjct: 181 CLQIAQYYTKDGAVDTAPQDQTTADNEKVTSWSVGPSTGIITVKTALGSHQVGRIALASF 240

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
               G V+   +    +             +  ++ +G LE SN +   +   MI  T+ 
Sbjct: 241 QNEGGLVKDGGNLYESSPNSGDAAYGTPGTNYGSLNQGALEMSNVDLAQQFTDMIVATRA 300

Query: 220 FNSITTLIDENEKSMLEAIR 239
           F +   +I  ++  + + + 
Sbjct: 301 FQANGKIITTDDTILEDLVN 320


>gi|49089306|gb|AAT51668.1| PA1081 [synthetic construct]
          Length = 250

 Score =  129 bits (324), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 49/239 (20%), Positives = 89/239 (37%), Gaps = 9/239 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + ++        +   A+N++N  T GFR    +   +   +  D      F  
Sbjct: 1   MDKMLYVSMSGASQNTLAMRAHANNLANISTSGFRRDFEQARSM--QVSGDSFPARVFAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           S +       GS   TG ELD A++GD + A+++P       R     +   G L +  G
Sbjct: 59  SERPGTDFSHGSLQETGNELDIAIDGDGFVAVQAPDGSEAYVRTAGMHIDALGMLRTGDG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEIS---QKGKVIATMGLYSVDMSQGFVRRENSG 176
              + +   + +   +K EI   G     +       V     +  V+ +   + +   G
Sbjct: 119 LPVLGNGGPIAVPPEEKVEIGQDGTISIRALGENPNVVAVVDRIKLVNPNLKQMEKGTDG 178

Query: 177 ---ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
                P          + V V  GFLE SN N++ EM  ++ L+++F     ++   E 
Sbjct: 179 LLHYKPQPGEQAPLADANVKVVSGFLESSNVNAVEEMTAILSLSRQFELHVKMMRTAED 237


>gi|330961200|gb|EGH61460.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 246

 Score =  129 bits (324), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 49/245 (20%), Positives = 95/245 (38%), Gaps = 6/245 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + ++            A+N++N  T GF     +   +   +  ++    ++  
Sbjct: 1   MDKLLYVAMSGASENAIAQKAHANNLANVSTNGFMRDLEQARSM--PVFGEVMPSRAYAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119
           S +       G+ + TG ELD A++GD W A+++P G    TR     +   G L   SG
Sbjct: 59  SERPGTDFSGGAMVQTGRELDIAVKGDGWIAVQTPDGGEAYTRSSGMNIDALGVLRDGSG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176
              + +   + +   Q+ EI   G     S          +     V      + +   G
Sbjct: 119 LPVMGNGGPIAVPPQQQIEIGADGTISIRSLGESPQVMAQVDRIKLVKPDLKTMEKGPDG 178

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           +       P +  + V V+ GFL+ SN N++ EM  ++ L+++F     ++   E+    
Sbjct: 179 LIHTKTGRPADVDATVQVESGFLQASNVNAVEEMTSVLALSRQFELHVKMMKTAEEDDQS 238

Query: 237 AIRNI 241
             R +
Sbjct: 239 MARVL 243


>gi|52787553|ref|YP_093382.1| FlhP [Bacillus licheniformis ATCC 14580]
 gi|163119681|ref|YP_080952.2| flagellar hook-basal body protein [Bacillus licheniformis ATCC
           14580]
 gi|52350055|gb|AAU42689.1| FlhP [Bacillus licheniformis ATCC 14580]
 gi|145903191|gb|AAU25314.2| flagellar hook-basal body protein [Bacillus licheniformis ATCC
           14580]
          Length = 275

 Score =  129 bits (324), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 53/276 (19%), Positives = 103/276 (37%), Gaps = 35/276 (12%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  S          L++++  ++ N++NTDT G++     FSE++      +++K + VA
Sbjct: 1   MLRSMITASNTMFELQKQIDNISHNLANTDTTGYKAKNTSFSELIRQQIEQVNEKNNEVA 60

Query: 61  SGKEYLS---------------KEVGSFISTGTELDFALEGDA-WFALESPRGIILTRDG 104
           + ++                   + GS   TG +LD AL     +F +     +  TRDG
Sbjct: 61  ASRKTPPGLRLGVGAVMTDRLTHKQGSLKETGRDLDIALTSPYQYFQVNVGGEVQYTRDG 120

Query: 105 RFKV-----TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEIS---------- 149
            F +       +   +     + VLD     I+  Q+ +   V E G ++          
Sbjct: 121 AFYLTPAAGNANQMQLVTKEGHAVLDENGNAIRFNQRYKHIKVDESGSVTVSSDNQGEAP 180

Query: 150 ---QKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANS 206
                G V A       +         +   +  +          +++K+GFLE SN + 
Sbjct: 181 LRFNLGIVRAVKPQALTEEGSNLFSVSDELRATALINLNGAGRQDISLKQGFLESSNVDV 240

Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
             EM  +I   + +   +  I   ++ M   I ++ 
Sbjct: 241 SKEMTDLISSQRSYQMNSRAITMGDQMMG-LINSVR 275


>gi|160901818|ref|YP_001567399.1| flagellar basal body rod protein [Petrotoga mobilis SJ95]
 gi|160359462|gb|ABX31076.1| flagellar basal body rod protein [Petrotoga mobilis SJ95]
          Length = 240

 Score =  129 bits (323), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 50/247 (20%), Positives = 98/247 (39%), Gaps = 23/247 (9%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV----------GAIKND 51
                   A  L     L+++++N++N +TVG++     F  V                 
Sbjct: 1   MKGIYNATAGMLNSFAELNSISNNLANLNTVGYKKDFNLFKSVYEKEIRSYQNAQGKGEP 60

Query: 52  IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDD 111
           I    S V   +   + E G  + T  +LDFA+EGD +F +E       TR+G F ++ +
Sbjct: 61  IGNIYSSVVLDEVIPNLEQGPLVETSGKLDFAIEGDGFFKIERNGNYFYTRNGEFSLSPE 120

Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171
             LV+ SG Y + +  +  +       +          ++G +  T    ++   +   +
Sbjct: 121 NYLVTKSGDYVLDEENNPILVDLDNFFVD---------EEGNISGTNTRLNILNVENLNK 171

Query: 172 RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
              +          L       +++GFLE SN +++ EM +MI   +KF+ +   +   +
Sbjct: 172 YGENYF----TGEELGQAGNFNMRQGFLESSNVDALNEMIKMIEANRKFDILQKAVLTGD 227

Query: 232 KSMLEAI 238
               + I
Sbjct: 228 SLNAKLI 234


>gi|317179250|dbj|BAJ57038.1| flagellar basal-body rod protein [Helicobacter pylori F30]
          Length = 269

 Score =  129 bits (323), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 51/268 (19%), Positives = 100/268 (37%), Gaps = 26/268 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDID---- 53
           MQ  +     A  A   RL  +++N++N +T GF+        F  +    +  +     
Sbjct: 1   MQNGYYAATGAMAAQFNRLDLISNNLANLNTNGFKRDDAITGDFLRLYQQYREQLPLEDQ 60

Query: 54  ----------QKISFVASGKEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTR 102
                              + Y  + +G+F  T   LDFAL   + +FA+++  G+  TR
Sbjct: 61  TKASAKYLNRNLNRVPILSEIYTDRSLGAFEETHNPLDFALTSPNLYFAIQTNEGVAYTR 120

Query: 103 DGRFKVTDDGSLVSASGKYP------VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156
           DG F V  DG LV+ +G               + +   + +   N       ++      
Sbjct: 121 DGHFSVDKDGFLVTLNGFRVLSRSGLNEKGGIMLMPNAEIEVNQNGEITFRDNEAPIQAG 180

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
            + L S    +   +   +  +        +      +++  LE SN N++ EM  +I +
Sbjct: 181 ALALVSFSEPKNLKKIGQNLYTYQGEGI-HQISDSGALRQYMLEKSNVNAVREMSALIGI 239

Query: 217 TQKFNSITTLIDE-NEKSMLEAIRNIAS 243
            +  +  + ++    +    EAI  +AS
Sbjct: 240 NRFLDMYSKVLKTHQDDMNAEAINKLAS 267


>gi|71735751|ref|YP_275560.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|289627765|ref|ZP_06460719.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|289651644|ref|ZP_06482987.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           aesculi str. 2250]
 gi|71556304|gb|AAZ35515.1| flagellar basal-body rod protein FlgF [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|320325095|gb|EFW81164.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           glycinea str. B076]
 gi|320329354|gb|EFW85347.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330866424|gb|EGH01133.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           aesculi str. 0893_23]
 gi|330880528|gb|EGH14677.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330889082|gb|EGH21743.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           mori str. 301020]
 gi|330986470|gb|EGH84573.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           lachrymans str. M301315]
 gi|331011044|gb|EGH91100.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 246

 Score =  129 bits (323), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 49/245 (20%), Positives = 95/245 (38%), Gaps = 6/245 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + ++            A+N++N  T GF     +   +   +  ++    ++  
Sbjct: 1   MDKLLYVAMSGASENAIAQKAHANNLANVSTNGFMRDLEQARSM--PVFGEVMPSRAYAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119
           S +       G+ + TG ELD A++GD W A+++P G    TR     +   G L   SG
Sbjct: 59  SERPGTDFSAGAMVETGRELDIAVKGDGWIAVQTPDGGEAYTRSSGMNIDALGVLRDGSG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176
              + +   + +   Q+ EI   G     S          +     V      + +   G
Sbjct: 119 LPVMGNGGPIAVPPQQQIEIGADGTISIRSLGESPQVMAQVDRIKLVKPDLKTMEKGPDG 178

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           +       P +  + V V+ GFL+ SN N++ EM  ++ L+++F     ++   E+    
Sbjct: 179 LIHTKTGRPADADATVQVESGFLQASNVNAVEEMTSVLALSRQFELHVKMMKTAEEDDQS 238

Query: 237 AIRNI 241
             R +
Sbjct: 239 MARVL 243


>gi|148240969|ref|YP_001220470.1| putative flagellar basal-body rod protein flgF [Bradyrhizobium sp.
           BTAi1]
 gi|146411345|gb|ABQ39798.1| putative flagellar basal-body rod protein flgF [Bradyrhizobium sp.
           BTAi1]
          Length = 244

 Score =  129 bits (323), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 62/240 (25%), Positives = 110/240 (45%), Gaps = 12/240 (5%)

Query: 9   LAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND-----IDQKISFVASGK 63
           L+  +ALE+RL  VA+N++N DT GFR  ++ F E +   K        ++ +S V +G 
Sbjct: 9   LSRLIALERRLDNVANNVANADTTGFRARQLSFQEYLSPAKEGEANGKRERPVSLVNAGL 68

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPV 123
           +Y     G+   TG  LD A+ GD +FA+++P+G   TR G       G LV+  G    
Sbjct: 69  QYPDSAGGAIQLTGNPLDVAIVGDGYFAVQTPQGERYTRAGSLTTDATGRLVTMDG--LP 126

Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183
           +   + PI +   +    +   G IS   + I ++ L   D     ++   S +  +  P
Sbjct: 127 ILSRTGPITVAPGERSLTIASDGTISSSQRTIGSLRLVRFDGP---LQAMGSNLFESRSP 183

Query: 184 TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
                   V +  G LE SN  ++ EM ++  +T+ +  +  L+  ++      +  + S
Sbjct: 184 ALNIPTGSVKLLVGDLEKSNVQNVQEMSRLSEVTRSYEQVGGLLKNSQNVDD--LNKLGS 241


>gi|168180921|ref|ZP_02615585.1| flagellar hook protein FlgE [Clostridium botulinum NCTC 2916]
 gi|182668204|gb|EDT80183.1| flagellar hook protein FlgE [Clostridium botulinum NCTC 2916]
 gi|322806984|emb|CBZ04554.1| flagellar hook protein FlgE [Clostridium botulinum H04402 065]
          Length = 334

 Score =  129 bits (323), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 43/331 (12%), Positives = 94/331 (28%), Gaps = 92/331 (27%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50
           M  S   G++   A + RL  V +N++N +T  F++  ++F +++    +          
Sbjct: 1   MLRSMYSGISGLKAQQTRLDIVGNNIANANTTAFKSQSIRFQDMLSQNMSSATGPSANLG 60

Query: 51  --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP------------- 95
             +  Q    V     +     G+  +TG  LD A++G  +F +                
Sbjct: 61  GTNPRQVGLGVQVAGIFTKFTTGNMQTTGRNLDMAIDGPGFFIVGKGKFSDTTTISTSGD 120

Query: 96  ---------RGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQ----------- 135
                      +  T+DG F + +DGSL+++ G   +    +                  
Sbjct: 121 NEGAINGGTMEVSFTKDGSFNLDEDGSLITSDGLRIMGYAINDAAITKDATTGKIKVGFK 180

Query: 136 ----------------------------------KDEIFNVGEKGEISQKGKVIATMGLY 161
                                               +   +     +      +  + + 
Sbjct: 181 NADEDPKADATKLVPLAIPDEIEKGSEKVRVQSFTIDKDGLIVASLVDGTSAALGQIAMA 240

Query: 162 SVDMSQGFVRRENSGI-------------SPNIPPTPLEDLSGVTVKRGFLEDSNANSMY 208
           S     G  +   +                               +  G +E SN +   
Sbjct: 241 SFKNEGGLEKMGKNLYRNSANSGEAIIRSGRGTDADKDNSKGYGDMLNGMIEMSNVDLAE 300

Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           E  +MI   + F +   +I   ++ + E + 
Sbjct: 301 EFTEMIVANRAFQACGKMITTGDEILQELVN 331


>gi|46578927|ref|YP_009735.1| flagellar basal-body rod protein [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120603472|ref|YP_967872.1| hypothetical protein Dvul_2429 [Desulfovibrio vulgaris DP4]
 gi|46448339|gb|AAS94994.1| flagellar basal-body rod protein, putative [Desulfovibrio vulgaris
           str. Hildenborough]
 gi|120563701|gb|ABM29445.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           vulgaris DP4]
 gi|311232785|gb|ADP85639.1| flagellar basal-body rod protein FlgF [Desulfovibrio vulgaris RCH1]
          Length = 260

 Score =  129 bits (323), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 57/260 (21%), Positives = 106/260 (40%), Gaps = 21/260 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-------- 52
           MQ S   GL   L  E RL+ +A+N++N +T G++   + F + +    +D         
Sbjct: 1   MQDSMLSGLFGALTTEHRLNNIANNLANVNTNGYKRDVLAFKDTMALFAHDEIMEPMANV 60

Query: 53  --------DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDG 104
                      ++             GSF  T   LD A+ G+ +F + +P G   TR+G
Sbjct: 61  RSKKLFPEPLHVARPRIAVARTDFSQGSFHYTSDPLDLAISGNGFFKVRTPEGEFYTRNG 120

Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
            F+ T DG LV+  G   + +   + +    + +   V   G I+  G  +  + + +V 
Sbjct: 121 HFRQTSDGQLVTMQGWPVLSEGGDINL---PQGKNLQVASDGRIAVDGVDVGQLQVVTVS 177

Query: 165 MSQGFVRRENSGIS--PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222
             +G  +   +            +     V V +G++E SN   + EM  MI   ++F +
Sbjct: 178 DLEGLEKLGGNLYRLREGSTAGEVPVGPDVIVSQGYIETSNVEVVNEMVNMIETQRQFEA 237

Query: 223 ITTLIDENEKSMLEAIRNIA 242
              ++  ++    +AI  I 
Sbjct: 238 YQKVMQTSDTVDRDAITKIG 257


>gi|91976615|ref|YP_569274.1| flagellar basal body rod protein [Rhodopseudomonas palustris BisB5]
 gi|91683071|gb|ABE39373.1| flagellar basal body rod protein [Rhodopseudomonas palustris BisB5]
          Length = 244

 Score =  129 bits (323), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 60/224 (26%), Positives = 102/224 (45%), Gaps = 6/224 (2%)

Query: 7   IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND---IDQKISFVASGK 63
           IGL+  +AL+Q++  +A N++N +T GF+   ++F E +   K            + +  
Sbjct: 7   IGLSRLIALQQQVDNLARNVANQNTTGFKREGIRFLEYLTDAKEADDIPSAPKRSLVAVT 66

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPV 123
            Y     GS   TG   D A+ GD +F + + RG   TR+G F +   G LV+ SG   +
Sbjct: 67  GYTDFSAGSLQLTGNSTDAAVLGDGFFVVRTSRGDRYTRNGAFTLDKQGRLVTLSGDLVL 126

Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183
              A+  I++P  D   ++G  G IS    +I  + +   D  +  V       +   PP
Sbjct: 127 --AANGTIKVPLTDVNLSIGTDGTISTARSIIGRLRVVKFDDPRSLVAEGTGLFASGSPP 184

Query: 184 TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
             L   S   +    LE SN NS+ EM  ++  T+ +  +  ++
Sbjct: 185 IELNAGSI-RLATNALERSNVNSIREMSDLVAATRAYEQVANVV 227


>gi|302185581|ref|ZP_07262254.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           syringae 642]
 gi|330953725|gb|EGH53985.1| flagellar basal body rod protein FlgF [Pseudomonas syringae Cit 7]
          Length = 246

 Score =  129 bits (323), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 49/245 (20%), Positives = 95/245 (38%), Gaps = 6/245 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + ++            A+N++N  T GF     +   +   +  ++    ++  
Sbjct: 1   MDKLLYVAMSGASENAIAQKAHANNLANVSTNGFMRDLEQARSM--PVFGEVMPSRAYAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119
           S +       G+ + TG ELD A++GD W A+++P G    TR     +   G L   SG
Sbjct: 59  SERPGTDFSAGAMVQTGRELDIAVKGDGWIAVQTPDGGEAYTRSSGMNIDALGVLRDGSG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176
              + +   + +   Q+ EI   G     S          +     V      + +   G
Sbjct: 119 LPVMGNGGPIAVPPQQQIEIGADGTISIRSLGESPQVMAQVDRIKLVKPDLKTMEKGPDG 178

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           +       P +  + V V+ GFL+ SN N++ EM  ++ L+++F     ++   E+    
Sbjct: 179 LIHTKTGRPADADATVQVESGFLQASNVNAVEEMTSVLALSRQFELHVKMMKTAEEDDQS 238

Query: 237 AIRNI 241
             R +
Sbjct: 239 MARVL 243


>gi|52841452|ref|YP_095251.1| flagellar basal body rod protein FlgF [Legionella pneumophila
           subsp. pneumophila str. Philadelphia 1]
 gi|52628563|gb|AAU27304.1| flagellar basal body rod protein FlgF [Legionella pneumophila
           subsp. pneumophila str. Philadelphia 1]
          Length = 248

 Score =  129 bits (323), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 52/247 (21%), Positives = 109/247 (44%), Gaps = 7/247 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI--SF 58
           M+      ++   +  +R   +A+N++N +T GF+    +   +     N  +Q    SF
Sbjct: 1   MEPILYNSISGSRSDFKRQEIIANNLANINTPGFKADLYQAQTMYMNNANGNNQFSAHSF 60

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSA 117
           +      +    G  I+TG +LD A++GD W A++  +     TR G  ++  +G L++A
Sbjct: 61  ITQNANGIDTSPGEIITTGRDLDVAIDGDGWMAVQDSQGREAYTRGGSLRLNPNGQLITA 120

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV---IATMGLYSVDMSQGFVRREN 174
           SGK  + D   + I   Q  EI + G    +  +G V        +  V + +  + + +
Sbjct: 121 SGKVVLGDGGPISIPPAQSIEIGSDGTISIVPLEGDVKSLAILDRIKLVTLDRNNIYKND 180

Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
            G+          + +   ++ G LE SN  ++ +M  MI   ++F++   L+   + + 
Sbjct: 181 EGLIQLKSGAATANSNI-KLQSGALEGSNVKAIDQMVAMISAGREFDAQMKLLSTVDDNG 239

Query: 235 LEAIRNI 241
            +  + +
Sbjct: 240 QKLAQLL 246


>gi|331007438|ref|ZP_08330615.1| Flagellar basal-body rod protein flgF [gamma proteobacterium
           IMCC1989]
 gi|330418745|gb|EGG93234.1| Flagellar basal-body rod protein flgF [gamma proteobacterium
           IMCC1989]
          Length = 246

 Score =  129 bits (323), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 45/245 (18%), Positives = 98/245 (40%), Gaps = 7/245 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  I + +        +  ++N++N +T GFR+   +   + G    +     +F  
Sbjct: 1   MDKALYIAMTSAKNNMLGQAIRSNNLANANTTGFRSDFEQARSM-GVYYGEGLPTRAFAL 59

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +     +   G+ I TG +LD A++G  + A+++       TR G   V   G L + + 
Sbjct: 60  TETPQTNFAEGALIQTGRDLDVAVKGRGFIAVQAADGREAYTRAGSLYVDSAGVLRTGNN 119

Query: 120 KYPV---LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
              +     MA    Q  +      V   G+      +     +  V+  +  +++   G
Sbjct: 120 LPVMGNAGPMAIPEFQKLEIGLDGIVSIVGKGEAPDALAQVDQIKLVNPDEALLKKGADG 179

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           +        ++    V++  GFLE SN N + E+  ++ L +++     L+   E++   
Sbjct: 180 LLYAEEDVGIDVD--VSLVSGFLEGSNVNPVNELTHILTLARQYEMSIKLMKTTEENSQA 237

Query: 237 AIRNI 241
           + R +
Sbjct: 238 SARLL 242


>gi|15596278|ref|NP_249772.1| flagellar basal body rod protein FlgF [Pseudomonas aeruginosa PAO1]
 gi|107100526|ref|ZP_01364444.1| hypothetical protein PaerPA_01001551 [Pseudomonas aeruginosa PACS2]
 gi|116049010|ref|YP_792188.1| flagellar basal body rod protein FlgF [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|218892955|ref|YP_002441824.1| flagellar basal body rod protein FlgF [Pseudomonas aeruginosa
           LESB58]
 gi|254234217|ref|ZP_04927540.1| flagellar basal-body rod protein FlgF [Pseudomonas aeruginosa
           C3719]
 gi|254239439|ref|ZP_04932761.1| flagellar basal-body rod protein FlgF [Pseudomonas aeruginosa 2192]
 gi|296390555|ref|ZP_06880030.1| flagellar basal body rod protein FlgF [Pseudomonas aeruginosa PAb1]
 gi|313106036|ref|ZP_07792295.1| flagellar basal-body rod protein FlgF [Pseudomonas aeruginosa
           39016]
 gi|9946997|gb|AAG04470.1|AE004539_12 flagellar basal-body rod protein FlgF [Pseudomonas aeruginosa PAO1]
 gi|115584231|gb|ABJ10246.1| flagellar basal-body rod protein FlgF [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126166148|gb|EAZ51659.1| flagellar basal-body rod protein FlgF [Pseudomonas aeruginosa
           C3719]
 gi|126192817|gb|EAZ56880.1| flagellar basal-body rod protein FlgF [Pseudomonas aeruginosa 2192]
 gi|218773183|emb|CAW28995.1| flagellar basal-body rod protein FlgF [Pseudomonas aeruginosa
           LESB58]
 gi|310878797|gb|EFQ37391.1| flagellar basal-body rod protein FlgF [Pseudomonas aeruginosa
           39016]
          Length = 249

 Score =  129 bits (323), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 49/239 (20%), Positives = 89/239 (37%), Gaps = 9/239 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + ++        +   A+N++N  T GFR    +   +   +  D      F  
Sbjct: 1   MDKMLYVSMSGASQNTLAMRAHANNLANISTSGFRRDFEQARSM--QVFGDSFPARVFAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           S +       GS   TG ELD A++GD + A+++P       R     +   G L +  G
Sbjct: 59  SERPGTDFSHGSLQETGNELDIAIDGDGFVAVQAPDGSEAYVRTAGMHIDALGMLRTGDG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEIS---QKGKVIATMGLYSVDMSQGFVRRENSG 176
              + +   + +   +K EI   G     +       V     +  V+ +   + +   G
Sbjct: 119 LPVLGNGGPIAVPPEEKVEIGQDGTISIRALGENPNVVAVVDRIKLVNPNLKQMEKGTDG 178

Query: 177 ---ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
                P          + V V  GFLE SN N++ EM  ++ L+++F     ++   E 
Sbjct: 179 LLHYKPQPGEQAPLADANVKVVSGFLESSNVNAVEEMTAILSLSRQFELHVKMMRTAED 237


>gi|317130723|ref|YP_004097005.1| flagellar hook-basal body protein [Bacillus cellulosilyticus DSM
           2522]
 gi|315475671|gb|ADU32274.1| flagellar hook-basal body protein [Bacillus cellulosilyticus DSM
           2522]
          Length = 274

 Score =  128 bits (322), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 39/274 (14%), Positives = 87/274 (31%), Gaps = 35/274 (12%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS--- 57
           M        A  +  ++R   + +N++N +T G++  +         +   +        
Sbjct: 1   MLRGLYSAGAGMITQQRRQEMLTNNLANIETPGYKADQASIRSFPNQLIQAMGTNHMQKF 60

Query: 58  ----------FVASGKEYLSKEVGSFISTGTELDFALEGD--------------AWFALE 93
                      V   +   +   G    T    D AL                  +    
Sbjct: 61  GTNVIGELSTGVYMQERTPNFRQGDLQETFNSTDIALLQGVVPTNEETGQQAALMFVIEN 120

Query: 94  SPRGIILTRDGRFKVTDDGSLVSASGKYPVLDM-----ASVPIQIPQKDEIFNVGEKGEI 148
           S   +  +R+G F V   G L ++ G Y +              I + +       +  I
Sbjct: 121 SEGDLRYSRNGNFTVDGAGFLTTSQGNYVLDADGDRINVGNEDFIVRSNGEIIDANEQFI 180

Query: 149 SQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMY 208
           +Q    +       V    G +R +      +         +   +++GFLE +N ++  
Sbjct: 181 AQLDIALIADPDQLVKEGAGLLRYDGDNAIESAIDNAE---ATFQLQQGFLERANVDAAQ 237

Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            M +M+   + F +   ++   ++S+  A+ +I 
Sbjct: 238 TMTEMMSALRTFEANQRVLQAYDRSLERAVNDIG 271


>gi|33592480|ref|NP_880124.1| flagellar basal body rod protein FlgF [Bordetella pertussis Tohama
           I]
 gi|33572126|emb|CAE41668.1| flagellar basal-body rod protein FlgF [Bordetella pertussis Tohama
           I]
 gi|332381897|gb|AEE66744.1| flagellar basal body rod protein FlgF [Bordetella pertussis CS]
          Length = 254

 Score =  128 bits (322), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 65/253 (25%), Positives = 107/253 (42%), Gaps = 11/253 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       +     + +  + + +NM+N +T GFR     +  V  A    +  ++S VA
Sbjct: 1   MDRIIYTAMNGAARIAEHQTVLGNNMANVNTPGFREQIALYRSVPMADGTSLPTRVSTVA 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           S     + E+G+ ++TG ELD AL G  WFAL++P+G   TR G  +V  +G L +A+G+
Sbjct: 61  S-TPGNNFEMGNMMTTGRELDVALAGPGWFALQTPQGEAYTRAGALQVGVNGLLQTATGQ 119

Query: 121 YPVLDMASVPIQIPQKD----EIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
             + D  +V     Q          V   G       ++    L  V+     +   + G
Sbjct: 120 PVLSDQNAVIEVPDQASLTIASDGTVTAIGAGDPPNNILNLGRLKMVNPPPQQLVHGDDG 179

Query: 177 ISPN------IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
           +          P  PL       +  G LE SNA+ M  M  MI   ++F     +I E 
Sbjct: 180 VFRMPPQPGGQPAAPLPADPSQRLLSGVLEGSNASPMGAMVGMIQNARRFEMQMQVIREA 239

Query: 231 EKSMLEAIRNIAS 243
           +K+   A   +A+
Sbjct: 240 DKNAERANGILAA 252


>gi|304407727|ref|ZP_07389378.1| fagellar hook-basal body protein [Paenibacillus curdlanolyticus
           YK9]
 gi|304343210|gb|EFM09053.1| fagellar hook-basal body protein [Paenibacillus curdlanolyticus
           YK9]
          Length = 288

 Score =  128 bits (322), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 47/286 (16%), Positives = 88/286 (30%), Gaps = 44/286 (15%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRT---IKVKFSEVVGAIKN------- 50
           M        A     ++R  TV +N+SN +T G++    +   F E++ A+         
Sbjct: 1   MLRGLYTAAAGLTTQQRRHDTVTNNISNINTPGYKQTNEVTRSFPEMLLALTGTNDNSDK 60

Query: 51  DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGD----------------------- 87
            I +  + V + +    +  G    T    DF L  +                       
Sbjct: 61  RIGKLATGVFAEESLSLQLQGDLTETKRSGDFGLSANIQVPGITFDESGKYVSDTGEVTF 120

Query: 88  ----AWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVG 143
                +           TR+GRF +  +G L+ A G   +                    
Sbjct: 121 QPQAYFTVEGQDGQPRYTRNGRFDLDQNGYLIMADGSRVLGKNGQPVQFQAGTSMDDLQL 180

Query: 144 EKGEISQKGKVIATMGL----YSVDMSQGFVRRENS---GISPNIPPTPLEDLSGVTVKR 196
                       A  G       +      VR  +     +        +    GV VK+
Sbjct: 181 TDDFRFINTVTGADTGQSLQLTKIADPNALVREGDGKFRLVGDANLAEAVAAEDGVVVKQ 240

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G+ E SN +S   M  ++   + + +   ++   +KS+ +A+  I 
Sbjct: 241 GYYERSNVDSAQSMVDLMAALRAYEANQKVVQFYDKSLDKAVNEIG 286


>gi|283834454|ref|ZP_06354195.1| flagellar basal-body rod protein FlgF [Citrobacter youngae ATCC
           29220]
 gi|291070001|gb|EFE08110.1| flagellar basal-body rod protein FlgF [Citrobacter youngae ATCC
           29220]
          Length = 245

 Score =  128 bits (322), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 47/237 (19%), Positives = 85/237 (35%), Gaps = 7/237 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       L+            A+N++N +T GFR      S     +K           
Sbjct: 1   MDRLIYTALSGATQTLLEQQISANNLANVNTNGFRADMAMASN--DKVKGGGFDTRFMAK 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119
                ++   G    T   LD A++G  + A  +     + TR+G  +  D G  ++  G
Sbjct: 59  ESPSGVNDSTGVAEKTERPLDVAIQGSGYIAVQDKAGNEVYTRNGNIQQDDQG-QLTIDG 117

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176
              + D   + +         + G        G V ATM +     VD+    + + + G
Sbjct: 118 NVVLGDNGPIILPPNAIASFGSDGTLSVTPDDGDVTATMDIDRLKLVDIPVANLAKNSEG 177

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           +       P +    + V  GFLE SN +++ EM   I + ++F +   ++   E  
Sbjct: 178 MLVTADGIPAQRDENIKVSGGFLEGSNVSAVSEMMSSIAMNRQFEAQIKMMKTAEDL 234


>gi|163856436|ref|YP_001630734.1| flagellar basal body rod protein FlgF [Bordetella petrii DSM 12804]
 gi|163260164|emb|CAP42466.1| flagellar basal-body rod protein FlgF [Bordetella petrii]
          Length = 249

 Score =  128 bits (322), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 53/243 (21%), Positives = 96/243 (39%), Gaps = 7/243 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       +       +  + + +NM+N  T GFR     +  V       +  ++S V 
Sbjct: 1   MDRIIYTAMGGAARAAEHQAVLNNNMANVSTPGFREQLAMYRSVPVLDGTSLPTRVSTV- 59

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           +     + ++G+  +TG  LD AL G  W A+++P+G   TR G  +V  +G L +A G+
Sbjct: 60  TATPGSNFQLGNMETTGRALDVALAGPGWLAIQTPQGEAYTRAGDLQVGVNGLLQTAQGQ 119

Query: 121 YPVLDMAS----VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
             + D         +          +   G       ++    L  V+  +  + R + G
Sbjct: 120 PVLSDQNGVIDVPELATLTIASDGTITALGAGDPPNNILNLGRLKMVNPPETAMVRGDDG 179

Query: 177 ISPNI--PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
           +         PL     + +  G LE SNA+ +  M  MI   ++F     +I E +K+ 
Sbjct: 180 VFRMAQGGGQPLPADPALRLMSGVLESSNASPIKAMVGMIDNARRFEMQMQVISEADKNA 239

Query: 235 LEA 237
             A
Sbjct: 240 ERA 242


>gi|260568536|ref|ZP_05839005.1| flagellar basal body rod protein [Brucella suis bv. 4 str. 40]
 gi|260155201|gb|EEW90282.1| flagellar basal body rod protein [Brucella suis bv. 4 str. 40]
          Length = 202

 Score =  128 bits (322), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 70/214 (32%), Positives = 108/214 (50%), Gaps = 14/214 (6%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
             S  +GL++ + LE+R+  +A N++N  TVGFR    KF  +V    +D    +SF  +
Sbjct: 3   NNSIYVGLSSLITLERRMDAIAHNVANASTVGFRGEGTKFDTIVSDKASD---DVSFATA 59

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
           GK Y+  E G  I T   LD A++GDAW +  +P+G + +RDGR K+   G LVS +G  
Sbjct: 60  GKSYIRTEAGPLIKTDNPLDVAVKGDAWMSFSTPQGQVYSRDGRMKMLSTGDLVSVTGN- 118

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
                      I        +   G I Q G  +  +GLY++           SG+ P+ 
Sbjct: 119 ----------AILDVGGAPRISSDGAIYQNGVQVGVIGLYTIPADADLAYAGTSGVIPSK 168

Query: 182 PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIH 215
           P  P+ D + V V +G +E SN ++M EM ++I 
Sbjct: 169 PAQPVVDDNSVGVVQGMIEGSNVDAMTEMTRLIS 202


>gi|15645706|ref|NP_207883.1| flagellar basal-body rod protein (flgG) [Helicobacter pylori 26695]
 gi|2314244|gb|AAD08138.1| flagellar basal-body rod protein (flgG) [Helicobacter pylori 26695]
          Length = 269

 Score =  128 bits (322), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 53/268 (19%), Positives = 98/268 (36%), Gaps = 26/268 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDID---- 53
           MQ  +     A      RL   ++N++N +T GF+        F  +    +  +     
Sbjct: 1   MQNGYYAATGAMATQFNRLDLTSNNLANLNTNGFKRDDAITGDFLRLYQQYREQLPLEDQ 60

Query: 54  ----------QKISFVASGKEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTR 102
                              + Y  + +G+F  T   LDFAL   + +FA+++  GI  TR
Sbjct: 61  TKASAKYLNRNLNRVPILSEIYTDRSLGAFEETHNPLDFALTSPNLYFAIQTNEGIAYTR 120

Query: 103 DGRFKVTDDGSLVSASGKYP---VLDMASVPIQIPQKDEIFNVGEKGEISQKGK---VIA 156
           DG F V  DG LV+ +G              I +    EI      G   +  +      
Sbjct: 121 DGHFSVDKDGFLVTLNGFRVLSRSGLNEKGGIMLMPDAEIEVDQNGGITFRDNEAQIQAG 180

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
            + L S    +   +   +  +        +      +++  LE SN N++ EM  +I +
Sbjct: 181 ALALVSFSEPKNLKKIGQNLYTYQGEGV-HQVSDSGALRQYMLEKSNVNAVREMSALIEI 239

Query: 217 TQKFNSITTLIDE-NEKSMLEAIRNIAS 243
            +  +  + ++    +    EAI  +A+
Sbjct: 240 NRFLDMYSKVLKTHQDDMNAEAINKLAA 267


>gi|308063216|gb|ADO05103.1| flagellar basal-body rod protein [Helicobacter pylori Sat464]
          Length = 269

 Score =  128 bits (322), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 51/268 (19%), Positives = 101/268 (37%), Gaps = 26/268 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDID---- 53
           MQ  +     A +A   RL   ++N++N +T GF+        F  +    +  +     
Sbjct: 1   MQNGYYAATGAMVAQFNRLDLTSNNLANLNTNGFKRDDAVTGDFLRLYQQYREQLPLEDQ 60

Query: 54  ----------QKISFVASGKEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTR 102
                              + Y  + +G+F  T   LDFAL   + +FA+++  G+  TR
Sbjct: 61  TKASAKYLNRNLNRVPILSEIYTDRSLGAFEETHNPLDFALTSPNLYFAIQTNEGVAYTR 120

Query: 103 DGRFKVTDDGSLVSASGKYP------VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156
           DG F V  DG LV+ +G               + +   + +   N       ++      
Sbjct: 121 DGHFSVDKDGFLVTLNGFRVLSRSGLNEKGGIMLMPNAEIEVNQNGEITFRDNEAPIQAG 180

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
            + L S    +   +   +  +        +     ++++  LE SN N++ EM  +I +
Sbjct: 181 ALALVSFSEPKNLKKIGQNLYTYQGEGV-HQISDSGSLRQYMLEKSNVNAVREMSALIGI 239

Query: 217 TQKFNSITTLIDE-NEKSMLEAIRNIAS 243
            +  +  + ++    +    EAI  +AS
Sbjct: 240 NRFLDMYSKVLKTHQDDMNAEAINKLAS 267


>gi|66046705|ref|YP_236546.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           syringae B728a]
 gi|63257412|gb|AAY38508.1| Flagellar basal body rod protein:Protein of unknown function
           DUF1078 [Pseudomonas syringae pv. syringae B728a]
 gi|330899405|gb|EGH30824.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           japonica str. M301072PT]
 gi|330972415|gb|EGH72481.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           aceris str. M302273PT]
 gi|330975978|gb|EGH76044.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           aptata str. DSM 50252]
          Length = 246

 Score =  128 bits (322), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 49/245 (20%), Positives = 95/245 (38%), Gaps = 6/245 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + ++            A+N++N  T GF     +   +   +  ++    ++  
Sbjct: 1   MDKLLYVAMSGASENAIAQKAHANNLANVSTNGFMRDLEQARSM--PVFGEVMPSRAYAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119
           S +       G+ + TG ELD A++GD W A+++P G    TR     +   G L   SG
Sbjct: 59  SERPGTDFSAGAMVQTGRELDIAVKGDGWIAVQTPDGGEAYTRSSGMNIDALGVLRDGSG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176
              + +   + +   Q+ EI   G     S          +     V      + +   G
Sbjct: 119 LPVMGNGGPIAVPPQQQIEIGADGTISIRSLGESPQVMAQVDRIKLVRPDLKTMEKGPDG 178

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           +       P +  + V V+ GFL+ SN N++ EM  ++ L+++F     ++   E+    
Sbjct: 179 LIHTKTGRPADADATVQVESGFLQASNVNAVEEMTSVLALSRQFELHVKMMKTAEEDDQS 238

Query: 237 AIRNI 241
             R +
Sbjct: 239 MARVL 243


>gi|34498339|ref|NP_902554.1| flagellar basal-body rod protein flgF [Chromobacterium violaceum
           ATCC 12472]
 gi|34104193|gb|AAQ60552.1| flagellar basal-body rod protein flgF [Chromobacterium violaceum
           ATCC 12472]
          Length = 246

 Score =  128 bits (322), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 45/245 (18%), Positives = 95/245 (38%), Gaps = 6/245 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + +        + +T A+N++N +T  F+     +  +   +  D     ++V 
Sbjct: 1   MDRVLFLAMTGAKHEAWQQATTANNLANVNTNAFKADLAAYRAL--PVVGDGAPTRTYVV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASG 119
                     GS   TG   DFAL    +FA++ +      TRDG + +   G + + SG
Sbjct: 59  DNTIGFDASQGSLQHTGNPSDFALGTPGFFAVQGADGQEAYTRDGGYVLDATGLMRTHSG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM---GLYSVDMSQGFVRRENSG 176
              + D   + +    + ++ + G    + Q G   A      +  V+     V +    
Sbjct: 119 LLIMGDGGPITVPAGSQVQLGSDGSVMAVPQSGANRAPQLVGQIKMVNPGPKDVYKGEDK 178

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           +        L   + V +    LE SN NS+  + QMI   +++     ++  ++++  +
Sbjct: 179 LFHVNGGGTLPASADVKLVPETLESSNVNSVEALVQMISHGRQYELNIKMMQTSQQNDQQ 238

Query: 237 AIRNI 241
           A + +
Sbjct: 239 AAQLL 243


>gi|167567752|ref|ZP_02360668.1| flagellar basal body rod protein FlgG [Burkholderia oklahomensis
           EO147]
 gi|167574703|ref|ZP_02367577.1| flagellar basal body rod protein FlgG [Burkholderia oklahomensis
           C6786]
          Length = 258

 Score =  128 bits (322), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 49/255 (19%), Positives = 92/255 (36%), Gaps = 20/255 (7%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID----------- 53
             I      A + RL  +A+N++N +TVGF+  ++ F ++   I+               
Sbjct: 1   MWISKTGLQAQDARLQAIANNLANANTVGFKRDRMVFEDLFYRIERQPGAQLDQNNAAPL 60

Query: 54  --QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTD 110
             Q  +             GS  +TG  LD A+ G  +  ++   G    TR G+     
Sbjct: 61  GVQLGTGTRLVGTQKVFTDGSVQTTGQALDVAIVGKGFLQMQLANGETGYTRAGQLTKNA 120

Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169
           +G L +A G     ++A           E   V  K   + +   +  + L       G 
Sbjct: 121 EGLLTNAQGLPLQPEIAIPENATEIVIGENGVVAVKTPGASELTEVGQVQLADFVNPAGL 180

Query: 170 VRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224
           +   ++     +   P  +    T     +K+G LE SN   + EM +MI   + +   T
Sbjct: 181 LSIGDNLYMETVASGPPNEGDPGTDAFGKIKQGSLEASNVKVVDEMVEMIAAQRTYEMNT 240

Query: 225 TLIDENEKSMLEAIR 239
            ++   +  +    +
Sbjct: 241 KVLSAADSMLQYLAQ 255


>gi|152988763|ref|YP_001349649.1| flagellar basal body rod protein FlgF [Pseudomonas aeruginosa PA7]
 gi|150963921|gb|ABR85946.1| flagellar basal-body rod protein FlgF [Pseudomonas aeruginosa PA7]
          Length = 249

 Score =  128 bits (321), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 49/239 (20%), Positives = 89/239 (37%), Gaps = 9/239 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + ++        +   A+N++N  T GFR    +   +   +  D      F  
Sbjct: 1   MDKMLYVSMSGASQNTLAMRAHANNLANISTSGFRRDFEQARSM--QVFGDSFPARVFAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           S +       GS   TG ELD A++GD + A+++P       R     +   G L +  G
Sbjct: 59  SERPGTDFSHGSLQETGNELDIAIDGDGFVAVQAPDGSEAYVRTAGMHIDAVGMLRTGDG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEIS---QKGKVIATMGLYSVDMSQGFVRRENSG 176
              + +   + +   +K EI   G     +       V     +  V+ +   + +   G
Sbjct: 119 LPVLGNGGPIAVPPEEKVEIGQDGTISIRALGENPNVVAVVDRIKLVNPNLKQMEKGTDG 178

Query: 177 ---ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
                P          + V V  GFLE SN N++ EM  ++ L+++F     ++   E 
Sbjct: 179 LLHYKPQPGEQVPLADANVKVVSGFLESSNVNAVEEMTAILSLSRQFELHVKMMRTAED 237


>gi|225569955|ref|ZP_03778980.1| hypothetical protein CLOHYLEM_06050 [Clostridium hylemonae DSM
           15053]
 gi|225161425|gb|EEG74044.1| hypothetical protein CLOHYLEM_06050 [Clostridium hylemonae DSM
           15053]
          Length = 236

 Score =  128 bits (321), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 43/252 (17%), Positives = 91/252 (36%), Gaps = 27/252 (10%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------Q 54
           M TSF          + +L+ +++N +N +T G++     F +++       +       
Sbjct: 1   MNTSFYTASRGARTQQDKLNVISNNFANVNTYGYKAKSSVFQDLMYYNMRAGEGVATHLT 60

Query: 55  KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP--RGIILTRDGRFKVT--D 110
             +         +             D+A+ GD +F L  P    I  TR+G F ++   
Sbjct: 61  SGTGTVLDHTNTNFSQSGLGDGIGGYDYAISGDGFFMLRDPVTNEISYTRNGHFSLSRRA 120

Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170
           DG  +       VLD    PI++                  G +    G+YS   + G  
Sbjct: 121 DGFYLVTDSNKLVLDEGQNPIRVQG----------------GTLQGRPGVYSFASTDGMQ 164

Query: 171 RRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
              ++   P              +  G+LE SN +   EM   +  ++ ++ +  ++  +
Sbjct: 165 SAGDNEFVPVAKNGAPVLNREAKLLEGYLELSNVDMAQEMANTVESSRAYSYVLKMVQSS 224

Query: 231 EKSMLEAIRNIA 242
           ++ + + I ++ 
Sbjct: 225 DE-IEQTINSLR 235


>gi|74101659|gb|AAZ99749.1| FlgFL [Aeromonas hydrophila]
          Length = 244

 Score =  128 bits (321), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 47/244 (19%), Positives = 90/244 (36%), Gaps = 7/244 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV-VGAIKNDIDQKISFV 59
           M+      ++            A+N++N +T GFRT    F  V   A+  D        
Sbjct: 1   MEKLIYTAMSGAQHTLMAQQIRANNLANVNTAGFRTD---FERVSAYALTGDGYLSRVMA 57

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSAS 118
                    + G+ + TG +LD A+ G+ +  +++       TR G  +V  +G L++ +
Sbjct: 58  REEMAGTDFKAGALMQTGRKLDVAVRGEGFITVQTADGKEAYTRAGNLEVDAEG-LLTLN 116

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF-VRRENSGI 177
           G+  + D   + +   +       G        G     +G   +       + +   G+
Sbjct: 117 GRPVLGDGGEMVLPAYRDLSFGKDGSLSITPPGGGARLDVGRLKLVNPDPVELVKGPDGL 176

Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                    E    V +  GFLE +N N++ E+   + LT+ F     L+   +    + 
Sbjct: 177 FRLRQGGDAETSEQVVLASGFLEGANVNAVDELISSMSLTRNFELQVKLMKTADDQARQG 236

Query: 238 IRNI 241
            R I
Sbjct: 237 ARLI 240


>gi|323490138|ref|ZP_08095358.1| flagellar basal-body rod protein [Planococcus donghaensis MPA1U2]
 gi|323396186|gb|EGA89012.1| flagellar basal-body rod protein [Planococcus donghaensis MPA1U2]
          Length = 278

 Score =  128 bits (321), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 47/278 (16%), Positives = 94/278 (33%), Gaps = 38/278 (13%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA------------- 47
           M        +  +A  ++   + +N+SN +T GF+  +  F                   
Sbjct: 1   MFRGLYTATSGMMANNRQQQILTNNLSNANTPGFKEDQTVFRAFPEQLIKAVENSKKGTI 60

Query: 48  IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGD--------------AWFALE 93
           + ++I    + V + +   S   G    TG + D AL  +               +    
Sbjct: 61  VPHNIGTLTTGVYTQEGIPSFLQGPLKETGNQTDIALLDELLPTNPDTQQKGSMVFAVAA 120

Query: 94  SPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK 153
               +  T++G F V   G L ++ G   + +             + + GE   +   G 
Sbjct: 121 EDGEVRYTKNGSFAVDTQGFLTTSDGFSVLGEDLQPIQVGSADFTVQDNGEI--LLANGA 178

Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED---------LSGVTVKRGFLEDSNA 204
               + +   +  Q FV+   + +     P               +   +K+GF+E SN 
Sbjct: 179 QGDRLWVGYTENPQQFVKEGQNLLRWAGAPEASPQFIDNFDLLDGTPSFMKQGFVEQSNV 238

Query: 205 NSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           +    M  M+   + F S   +I   ++SM +A+  I 
Sbjct: 239 DLTKTMTDMMTTYRGFESNQKVIQAYDRSMEKAVNEIG 276


>gi|154687759|ref|YP_001422920.1| FlhO [Bacillus amyloliquefaciens FZB42]
 gi|154353610|gb|ABS75689.1| FlhO [Bacillus amyloliquefaciens FZB42]
          Length = 265

 Score =  128 bits (321), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 44/267 (16%), Positives = 97/267 (36%), Gaps = 29/267 (10%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKND-----I 52
           M        +A +  ++R   +++N++N +T G++  +     F E++ +         I
Sbjct: 1   MLKGLYTATSAMITQQRRTEMLSNNIANANTSGYKEDQGSIRAFPEMLLSRIEGDKKTKI 60

Query: 53  DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA-------------WFALESPRGII 99
               + V   +       GS  +T    D AL  +              ++ +++  G+ 
Sbjct: 61  GSVNTGVYMQELKPLFTQGSLKTTDQPTDIALMENQVPKNAETNENAELFYPVQTAGGVR 120

Query: 100 LTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG 159
            ++   F + ++ + ++ +G   +         I   +E F V E G ++  G+    + 
Sbjct: 121 YSKSSTFSLNEN-NQLTINGNLVLSTNGQP---ITVDNEKFTVSENGTVTTNGRPAGQID 176

Query: 160 LYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTV----KRGFLEDSNANSMYEMGQMIH 215
           +   +  +   R  N   S           +   V    K+G  E SN +      +M  
Sbjct: 177 IRMEEDVRNLKRDGNDLYSTADGSELPSAAANPQVSYSLKQGVSELSNVDVTSTYTEMTE 236

Query: 216 LTQKFNSITTLIDENEKSMLEAIRNIA 242
             + F +   +I   +KSM +A   I 
Sbjct: 237 AYRSFEANQKVIQAYDKSMDKAANEIG 263


>gi|38570329|gb|AAR24612.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni]
          Length = 270

 Score =  128 bits (321), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 50/268 (18%), Positives = 103/268 (38%), Gaps = 25/268 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDID---- 53
           MQ  +       +    +L  + +N++N +T G++   V    F  +    ++++     
Sbjct: 1   MQNGYYQATGGMVTQFNKLDVITNNLANINTSGYKRDDVVIADFKRIFKETQDELPIENH 60

Query: 54  ----------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILT 101
                              +EY    +GS  +T   LD A+  +  F         + LT
Sbjct: 61  TRDASRFVNTTIDGIPQVSQEYTDFSLGSLKATNNPLDLAMTREDAFYLVQTKDGEVRLT 120

Query: 102 RDGRFKVTDDGSLVSASGKYP-----VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156
           +DG F++ D+G LV+  G          +  +  I+IP      +V + G I   G   A
Sbjct: 121 KDGNFQLDDEGYLVNKQGYKVLSSDYFNNPQNAGIRIPNSAVQISVDKNGSIEVDGAQNA 180

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
            + +  VD  +   +  ++    +      +  +   +++GF + SN N + EM  +I  
Sbjct: 181 RLFVAQVDDIRALQKDGDNVYKIDDLTRIRDLKNSNAIRKGFSQGSNVNPVTEMVGLIEA 240

Query: 217 TQKFNSITTLIDEN-EKSMLEAIRNIAS 243
            +       ++  + +    EAI  +A+
Sbjct: 241 NRMVEMYQKVMTAHMDDLNQEAINKLAA 268


>gi|326386930|ref|ZP_08208544.1| hypothetical protein Y88_1568 [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326208610|gb|EGD59413.1| hypothetical protein Y88_1568 [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 270

 Score =  128 bits (321), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 61/270 (22%), Positives = 90/270 (33%), Gaps = 31/270 (11%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK--NDIDQKISFVAS 61
           S+   L+     +  LS + +N++N DT GF+   V FS +V A    N  +        
Sbjct: 2   SYYTSLSGLQNAQTDLSVIGNNIANADTNGFKKSSVDFSNLVAASAFTNPKNIVGIGSTV 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPR--GIILTRDGRFKVTDDGSLVSASG 119
                    G    TG+ LD  + GD +F   S     +  TR+G F +   G L   SG
Sbjct: 62  QSINQDFAQGGVKQTGSALDLMISGDGFFTTSSAVTGQVYYTRNGSFSMDGQGYLTDGSG 121

Query: 120 K---------------------YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158
                                    L  A+                         VI  +
Sbjct: 122 NRLQVFPTDSSGNVTSTTPGSAQVPLTNAAGSQFSGATVAADGSISVSYADGSNSVIGKV 181

Query: 159 GLYSVDMSQGFVRRENS-----GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQM 213
            L S    QG  +  +S     GIS              ++  G LE SN +   EM  +
Sbjct: 182 ALASFVAPQGLKQVGSSNYTSTGISGTATYGQPSTGQYGSLMSGSLEASNVDLSSEMVNL 241

Query: 214 IHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           I   Q F +    ID    ++ +AI N+ S
Sbjct: 242 ITAQQYFQANAKAID-ANTTINDAIINLKS 270


>gi|315124199|ref|YP_004066203.1| putative flagellar basal-body rod protein [Campylobacter jejuni
           subsp. jejuni ICDCCJ07001]
 gi|315017921|gb|ADT66014.1| putative flagellar basal-body rod protein [Campylobacter jejuni
           subsp. jejuni ICDCCJ07001]
          Length = 270

 Score =  128 bits (321), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 49/268 (18%), Positives = 102/268 (38%), Gaps = 25/268 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDID---- 53
           MQ  +       +    +L  + +N++N +T G++   V    F  +    ++++     
Sbjct: 1   MQNGYYQATGGMVTQFNKLDVITNNLANINTSGYKRDDVVIADFKRIFKETQDELPIENH 60

Query: 54  ----------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILT 101
                              +EY    +GS  +T   LD A+  +  F         + L 
Sbjct: 61  TRDASRFVNTTIDGIPQVSQEYTDFSLGSLKATNNPLDLAMTREDAFYLVQTKDGEVRLA 120

Query: 102 RDGRFKVTDDGSLVSASGKYP-----VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156
           +DG F++ D+G LV+  G          +  +  I+IP      +V + G I   G   A
Sbjct: 121 KDGNFQLDDEGYLVNKQGYKVLSSDYFNNPQNAGIRIPNGAVQISVDKNGSIEVDGAQNA 180

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
            + +  VD  +   +  ++    +      +  +   +++GF + SN N + EM  +I  
Sbjct: 181 RLFVAQVDDIRALQKDGDNVYKIDDLTRIRDLKNSNAIRQGFSQGSNVNPVTEMVGLIEA 240

Query: 217 TQKFNSITTLIDEN-EKSMLEAIRNIAS 243
            +       ++  + +    EAI  +A+
Sbjct: 241 NRMVEMYQKVMTAHMDDLNQEAINKLAA 268


>gi|54297183|ref|YP_123552.1| flagellar basal body rod protein FlgF [Legionella pneumophila str.
           Paris]
 gi|53750968|emb|CAH12379.1| flagellar biosynthesis protein FlgF [Legionella pneumophila str.
           Paris]
          Length = 248

 Score =  128 bits (320), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 52/247 (21%), Positives = 109/247 (44%), Gaps = 7/247 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS--F 58
           M+      ++   +  +R   +A+N++N +T GF+    +   +     N  +Q     F
Sbjct: 1   MEPILYKAVSGGRSDFKRQEMIANNLANINTPGFKADLYQAQTMYMNNANGNNQFNMHSF 60

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSA 117
           +      +    G  I+TG +LD A++GD W A++  +     TR G  ++  +G L++A
Sbjct: 61  ITQNTNGVDTSPGEIITTGRDLDVAIDGDGWMAVQDSQGREAYTRGGSLRLNANGQLITA 120

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV---IATMGLYSVDMSQGFVRREN 174
           SGK  + D   + I   Q  EI + G    +  +G V        +  V + +  + + +
Sbjct: 121 SGKVVLGDGGPISIPPAQSIEIGSDGTISIVPLEGDVKSLAILDRIKLVTLDRNNIYKND 180

Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
            G+          + +   ++ G LE SN N++ +M  MI   ++F++   L+   + + 
Sbjct: 181 EGLIQLRSGAATTNSNI-KLQSGALEGSNVNAIDQMVAMISAGREFDAQMKLLSTVDDNG 239

Query: 235 LEAIRNI 241
            +  + +
Sbjct: 240 QKLAQLL 246


>gi|33596141|ref|NP_883784.1| flagellar basal body rod protein FlgF [Bordetella parapertussis
           12822]
 gi|33601542|ref|NP_889102.1| flagellar basal body rod protein FlgF [Bordetella bronchiseptica
           RB50]
 gi|33573144|emb|CAE36791.1| flagellar basal-body rod protein FlgF [Bordetella parapertussis]
 gi|33575978|emb|CAE33057.1| flagellar basal-body rod protein FlgF [Bordetella bronchiseptica
           RB50]
          Length = 254

 Score =  128 bits (320), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 65/253 (25%), Positives = 107/253 (42%), Gaps = 11/253 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       +     + +  + + +NM+N +T GFR     +  V  A    +  ++S VA
Sbjct: 1   MDRIIYTAMNGAARIAEHQTVLGNNMANVNTPGFREQIALYRSVPMADGTSLPTRVSTVA 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           S     + E+G+ ++TG ELD AL G  WFAL++P+G   TR G  +V  +G L +A+G+
Sbjct: 61  S-TPGNNFEMGNMMTTGRELDVALAGPGWFALQTPQGEAYTRAGALQVGVNGLLQTATGQ 119

Query: 121 YPVLDMASVPIQIPQKD----EIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
             + D  +V     Q          V   G       ++    L  V+     +   + G
Sbjct: 120 PVLSDQNAVIEVPDQASLTIASDGTVTAIGAGDPPNNILNLGRLKMVNPPPQQLVHGDDG 179

Query: 177 ISPN------IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
           +          P  PL       +  G LE SNA+ M  M  MI   ++F     +I E 
Sbjct: 180 VFRMPQQPGGQPAAPLPADPSQRLLSGVLEGSNASPMGAMVGMIQNARRFEMQMQVIREA 239

Query: 231 EKSMLEAIRNIAS 243
           +K+   A   +A+
Sbjct: 240 DKNAERANGILAA 252


>gi|294339842|emb|CAZ88205.1| putative flagellar basal-body rod protein FlgF [Thiomonas sp. 3As]
          Length = 245

 Score =  128 bits (320), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 48/246 (19%), Positives = 101/246 (41%), Gaps = 9/246 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M T   I      A+ ++ +   +N++N +T G+R  + +F  +   +  +     ++  
Sbjct: 1   MDT-LWIAATGARAVLRQQAVTTNNLANVNTTGYRGEQAQFRAL--PVYGNALPTSAYTT 57

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASG 119
                 + + G    TG  LD A+ G  W A++ +      TR+G  +V+  G L ++ G
Sbjct: 58  VQGNSANLQEGPINHTGRNLDVAIRGSGWIAVQATNGDTAYTRNGDLQVSASGILSTSDG 117

Query: 120 KYPVL----DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
           +  +      ++  P++  Q      +      SQ   ++    +  V+     ++R   
Sbjct: 118 RPVLGQSGAPISVPPLESVQIGADGTISGVPVGSQPNALVVVNRIQLVNPPPAQMQRGAD 177

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
           G+  +    P      V +  G LE SN N +  M Q++  T+ F   T L+   +++  
Sbjct: 178 GLFRDTQG-PAPADGNVQLAVGALEGSNVNPVQAMIQILDNTRAFEMQTKLMQTVDQNHQ 236

Query: 236 EAIRNI 241
            A + +
Sbjct: 237 AATQLL 242


>gi|187935622|ref|YP_001885067.1| flagellar basal body rod protein FlgG [Clostridium botulinum B str.
           Eklund 17B]
 gi|187723775|gb|ACD24996.1| flagellar hook-basal body complex protein FlhP [Clostridium
           botulinum B str. Eklund 17B]
          Length = 256

 Score =  128 bits (320), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 100/248 (40%), Gaps = 16/248 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M   F    +   A +++L  +++++ NT T G++   V+FS+++    +          
Sbjct: 1   MFNIFANAQSGMNAYQEKLDYLSNDLVNTSTTGYKATDVQFSDLLTESLDRKGTPLVNKD 60

Query: 56  ---ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF-ALESPRGIILTRDGRFKVTDD 111
               + V  G +Y     G+ ++TG + D A++G  +  +++    I  TRDG  K+  +
Sbjct: 61  AINGTGVKLGMDYRKDTQGNLLTTGIKTDIAIDGKGYIASVQQDGTIAYTRDGNLKIDSN 120

Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV------IATMGLYSVDM 165
           G+LV A G    +       +   K    ++   G+     KV      +  + +++   
Sbjct: 121 GTLVDARGNKIYIQYEDGMSEGSPKLSSEDISIDGDGGISTKVDNQYVKVGQIPVFTAIG 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225
            + FV    +          +   +   +++G LE SN ++      +I   + F   + 
Sbjct: 181 DKAFVA-IGNNYFVASDDAQIALSNDYNIEQGMLEGSNVDTSEIFTDIISTQRAFQLSSK 239

Query: 226 LIDENEKS 233
            I   ++ 
Sbjct: 240 GITTADEV 247


>gi|224437224|ref|ZP_03658201.1| flagellar distal rod protein FlgG [Helicobacter cinaedi CCUG 18818]
 gi|313143684|ref|ZP_07805877.1| flagellar distal rod protein FlgG [Helicobacter cinaedi CCUG 18818]
 gi|313128715|gb|EFR46332.1| flagellar distal rod protein FlgG [Helicobacter cinaedi CCUG 18818]
          Length = 277

 Score =  128 bits (320), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 53/274 (19%), Positives = 107/274 (39%), Gaps = 32/274 (11%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           MQ+ +       +    RL  +++N++N +T GF+   V   + +   +   +Q      
Sbjct: 1   MQSGYYNTTGGMVTQFNRLDLISNNLANLNTTGFKRDDVVIGDYLRLFETHKEQLPIEDH 60

Query: 61  SGK-----------------EYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTR 102
           + K                 EY  + VGS   T   LDFAL+  +A+F +++P GI  TR
Sbjct: 61  TRKAAKFLNRTMNRVPIISEEYTDRSVGSLAQTDNPLDFALQRDNAFFVIKTPDGIRYTR 120

Query: 103 DGRFKVTDDGSLVSASGKYP-----------VLDMASVPIQIPQKDEIFNVGEKGEISQK 151
           DG F + +DG LV+  G              ++    + ++      ++      +   +
Sbjct: 121 DGNFNIDNDGHLVNKDGHLVLSRDGLDSQEGIIIPTGMYLESDNNGNLYLRNINNDAIAE 180

Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE--DLSGVTVKRGFLEDSNANSMYE 209
              I  + +   +  +   +   +                +   + +GFLE SN N++ E
Sbjct: 181 QINIGALAVVGFENPRYLKKVGKNLYEYPQDRLDERDIMQNSAMIAQGFLEKSNVNAVLE 240

Query: 210 MGQMIHLTQKFNSITTLIDEN-EKSMLEAIRNIA 242
           M  +I   +  +  + ++  + +    EAI  +A
Sbjct: 241 MSSLIETNRLVDMYSKVMKSHMDDLNTEAITKLA 274


>gi|16080693|ref|NP_391521.1| flagellar basal-body rod protein [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221311597|ref|ZP_03593444.1| flagellar basal-body rod protein [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221315924|ref|ZP_03597729.1| flagellar basal-body rod protein [Bacillus subtilis subsp. subtilis
           str. NCIB 3610]
 gi|221320837|ref|ZP_03602131.1| flagellar basal-body rod protein [Bacillus subtilis subsp. subtilis
           str. JH642]
 gi|221325122|ref|ZP_03606416.1| flagellar basal-body rod protein [Bacillus subtilis subsp. subtilis
           str. SMY]
 gi|6648066|sp|P39752|FLHO_BACSU RecName: Full=Flagellar hook-basal body complex protein flhO
 gi|1763700|emb|CAB05950.1| flhO [Bacillus subtilis subsp. subtilis str. 168]
 gi|2636165|emb|CAB15657.1| putative flagellar basal-body rod protein [Bacillus subtilis subsp.
           subtilis str. 168]
          Length = 270

 Score =  128 bits (320), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 48/272 (17%), Positives = 100/272 (36%), Gaps = 34/272 (12%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVV----------GA 47
           M        +A +A ++R   +++N++N +T G++  +     F E++          G 
Sbjct: 1   MLKGLYTATSAMIAQQRRTEMLSNNIANANTSGYKADQGSMRAFPEMLLSRIESKSPAGT 60

Query: 48  IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA-------------WFALES 94
            + +I    + V   +       GS  ST    D AL  +              ++ +++
Sbjct: 61  SRTEIGSVNTGVYMQELKPLFTQGSLKSTDQPTDIALIENQVPMSAETNEKAALFYPVQT 120

Query: 95  PRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV 154
             GI  ++   F + ++ + ++ +G+  +         I   +E F V E G ++  G+ 
Sbjct: 121 ADGIRYSKSSTFSLNEN-NQLTINGRPILSTDRQP---ITVDNENFTVSENGTVTTNGRT 176

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTV----KRGFLEDSNANSMYEM 210
              + +   +  +   R  N   S               V    K+G  E SN +     
Sbjct: 177 AGQIDVRMAEDVRNLKRDGNDLYSTADGNDLPSAAGNNQVAYSLKQGVSELSNVDVTSAY 236

Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            +M    + F +   +I   +KSM +A   I 
Sbjct: 237 TEMTEAYRSFEANQKVIQAYDKSMDKAANEIG 268


>gi|208434303|ref|YP_002265969.1| flagellar basal-body rod protein [Helicobacter pylori G27]
 gi|208432232|gb|ACI27103.1| flagellar basal-body rod protein [Helicobacter pylori G27]
          Length = 269

 Score =  128 bits (320), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 52/268 (19%), Positives = 97/268 (36%), Gaps = 26/268 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDID---- 53
           MQ  +     A      RL   ++N++N +T GF+        F  +    +  +     
Sbjct: 1   MQNGYYAATGAMATQFNRLDLTSNNLANLNTNGFKRDDAITGDFLRLYQQYREQLPLEDE 60

Query: 54  ----------QKISFVASGKEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTR 102
                              + Y  + +G+F  T   LDFAL   + +FA+++  G+  TR
Sbjct: 61  TKASAKYLNRNLNRVPVLSEIYTDRSLGAFEETHNPLDFALTSPNLYFAIQTNEGVAYTR 120

Query: 103 DGRFKVTDDGSLVSASGKYP---VLDMASVPIQIPQKDEIFNVGEKGEISQKGK---VIA 156
           DG F V  DG LV+ +G              I +     I      G   +  +      
Sbjct: 121 DGHFSVDKDGFLVTLNGFKVLSRSGLNEKGGIMLMPDAAIEVDQNGGITFRDNEAQIQAG 180

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
            + L S    +   +   +  +        +      +K+  LE SN N++ EM  +I +
Sbjct: 181 ALALVSFSEPKNLKKIGQNLYTYQGEGV-HQVSDSGALKQYMLEKSNVNAVREMSALIEI 239

Query: 217 TQKFNSITTLIDE-NEKSMLEAIRNIAS 243
            +  +  + ++    +    EAI  +A+
Sbjct: 240 NRFLDMYSKVLKTHQDDMNAEAINKLAT 267


>gi|210134550|ref|YP_002300989.1| flagellar basal-body rod protein [Helicobacter pylori P12]
 gi|210132518|gb|ACJ07509.1| flagellar basal-body rod protein [Helicobacter pylori P12]
          Length = 269

 Score =  128 bits (320), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 53/268 (19%), Positives = 98/268 (36%), Gaps = 26/268 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDID---- 53
           MQ  +     A      RL   ++N++N +T GF+        F  +    +  +     
Sbjct: 1   MQNGYYAATGAMATQFNRLDLTSNNLANLNTNGFKRDDAITGDFLRLYQQYREQLPLEDQ 60

Query: 54  ----------QKISFVASGKEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTR 102
                              + Y  K +G+F  T   LDFAL   + +FA+++  G+  TR
Sbjct: 61  TKASAKYLNRNLNRVPILSEIYTDKSLGAFEETHNPLDFALTSPNLYFAIQTNEGVAYTR 120

Query: 103 DGRFKVTDDGSLVSASGKYP---VLDMASVPIQIPQKDEIFNVGEKGEISQKGK---VIA 156
           DG F V  DG LV+ +G              I +    EI      G   +  +      
Sbjct: 121 DGHFSVDKDGFLVTLNGFRVLSRSGLNEKGGIMLMPDAEIEVDQNGGITFRDNEAQIQAG 180

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
            + L S    +   +   +  +        +      +++  LE SN N++ EM  +I +
Sbjct: 181 ALALVSFSEPKNLKKIGQNLYTYQGEGV-HQVSDSGALRQYMLEKSNVNAVREMSALIEI 239

Query: 217 TQKFNSITTLIDE-NEKSMLEAIRNIAS 243
            +  +  + ++    +    EAI  +A+
Sbjct: 240 NRFLDMYSKVLKTHQDDMNAEAINKLAT 267


>gi|108562780|ref|YP_627096.1| flagellar basal-body rod protein [Helicobacter pylori HPAG1]
 gi|107836553|gb|ABF84422.1| flagellar basal-body rod protein [Helicobacter pylori HPAG1]
          Length = 269

 Score =  128 bits (320), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 53/268 (19%), Positives = 98/268 (36%), Gaps = 26/268 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDID---- 53
           MQ  +     A      RL   ++N++N +T GF+        F  +    +  +     
Sbjct: 1   MQNGYYAATGAMATQFNRLDLTSNNLANLNTNGFKRDDAITGDFLRLYQQYREQLPLEDQ 60

Query: 54  ----------QKISFVASGKEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTR 102
                              + Y  + +G+F  T   LDFAL   + +FA+++  G+  TR
Sbjct: 61  TKASAKYLNRNLNRVPILSEIYTDRSLGAFEGTNNPLDFALTSPNLYFAIQTNEGVAYTR 120

Query: 103 DGRFKVTDDGSLVSASGKYP---VLDMASVPIQIPQKDEIFNVGEKGEISQKGK---VIA 156
           DG F V  DG LV+ +G              I +    EI      G   +  +      
Sbjct: 121 DGHFSVDKDGFLVTLNGFRVLSRSGLNEKGGIMLMPDAEIEVDQNGGITFRDNEAQIQAG 180

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
            + L S    +   +   +  +        +      +++  LE SN N++ EM  +I +
Sbjct: 181 ALALVSFSEPKNLKKIGQNLYTYQGEGI-HQVSDSGALRQYMLEKSNVNAVREMSALIEI 239

Query: 217 TQKFNSITTLIDE-NEKSMLEAIRNIAS 243
            +  +  + ++    +    EAI  +AS
Sbjct: 240 NRFLDMYSKVLKTHQDDMNAEAINKLAS 267


>gi|329928728|ref|ZP_08282577.1| flagellar hook-basal body protein [Paenibacillus sp. HGF5]
 gi|328937509|gb|EGG33927.1| flagellar hook-basal body protein [Paenibacillus sp. HGF5]
          Length = 296

 Score =  127 bits (319), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 44/290 (15%), Positives = 101/290 (34%), Gaps = 49/290 (16%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRT---IKVKFSEVVGAIKND------- 51
                   +  +  EQR +TV  N++N +T G++    ++  F EV+ ++          
Sbjct: 5   LRGLYTAASGMMTQEQRHNTVTQNIANVNTTGYKATNSVQRSFPEVLVSMIGGNESSNAG 64

Query: 52  --IDQKISFVASGKEYLSKEVGSFISTGTELDFAL------------------------- 84
             + +  + V + +       G+   T    DFAL                         
Sbjct: 65  RKLGKFNTGVYAEESISLYTEGALRETNKTTDFALVSSFTVQNPATGQAYPFDASGRYVD 124

Query: 85  --------EGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQK 136
                       +        +  TR+G F+V+ +G+L+S SG   + +     +     
Sbjct: 125 ENGEVIYRPEGFFTVQNENGDVRYTRNGSFRVSPEGNLLSESGYQVLDNNNRPIVLTGPA 184

Query: 137 DEIFNVGEKGEISQKGKVIATM-GLYSVDMSQGFVRRENSGIS---PNIPPTPLEDLSGV 192
            +     +   +   G+    + G+  V    G +R  +       P+     +      
Sbjct: 185 SDFTVNEQGEIMDAAGRGTGIILGVSIVSQPHGLIREGHGVFRMADPDGEVRFMTPADNG 244

Query: 193 TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            V++GF+E SN +    M ++    + + +   ++   ++++ +A+  I 
Sbjct: 245 VVRQGFIEGSNVDPTQSMVELTAALRAYETNQKIVQYYDRTLEKAVNEIG 294


>gi|296282278|ref|ZP_06860276.1| flagellar basal-body rod protein FlgF [Citromicrobium bathyomarinum
           JL354]
          Length = 246

 Score =  127 bits (319), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 46/243 (18%), Positives = 83/243 (34%), Gaps = 6/243 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       L+   A   R   +A NM+NTDT+GFR   ++   +   I+   ++  S   
Sbjct: 1   MDRLIYTALSGMQASMDRQRAIASNMANTDTLGFRAELIEQRAM--TIEGHPNEARSMQV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G  I TG +LD A+   +  A+++       TR G   ++  G LV+  G
Sbjct: 59  ARVTGADMTGGEVIETGRDLDLAIATKSLMAVQADDGTEAYTRRGDLSISATGLLVTGDG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ---GFVRRENSG 176
              + D   + +    +  I   G                +  + ++      + +   G
Sbjct: 119 HPVLGDTGPITVPPGGRISISEDGTVTRSDPDAPEAPPAEVGRIKLASWEGSPIAKGLDG 178

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           +        L       V  G LE SN      +  MI   + F   + L+    +    
Sbjct: 179 LFRVEGGGILPLDEEARVHSGALEQSNVKPTEVLVAMIEEQRLFAMRSKLVSTARQLDES 238

Query: 237 AIR 239
             +
Sbjct: 239 GAQ 241


>gi|26991075|ref|NP_746500.1| flagellar basal body rod protein FlgF [Pseudomonas putida KT2440]
 gi|24986109|gb|AAN69964.1|AE016634_13 flagellar basal-body rod protein FlgF [Pseudomonas putida KT2440]
          Length = 246

 Score =  127 bits (319), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 46/246 (18%), Positives = 93/246 (37%), Gaps = 9/246 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + +             A+N++N  T GF+    +   +   +  D     +F  
Sbjct: 1   MDKLLYVAMTGASQNALAQKAHANNLANISTNGFQRDLEQARSM--PVFGDSFPARAFAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           + +       G  + TG +LD A+ G  + A+++P       R G   +   G L + +G
Sbjct: 59  TERPATDFSEGPLVETGRDLDVAVTGKGFIAVQAPDGSEAYVRTGSLNIDALGVLRAGNG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV---IATMGLYSVDMSQGFVRRENSG 176
              + +   + I   QK E+   G     S             +  V+     + +   G
Sbjct: 119 MPVIGNGGPIAIPPEQKVEVGADGTISIRSMGEDPRVMAEVDRIKLVNPDTKGLTKGLDG 178

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN---EKS 233
           +       P +    V V  GFLE SN N++ EM  ++ L+++F     +++     +++
Sbjct: 179 LIHTTSGQPADADVNVRVVAGFLEGSNVNAVEEMTSVLALSRQFELHVKMMNTAKEGDEA 238

Query: 234 MLEAIR 239
           M   ++
Sbjct: 239 MARVLQ 244


>gi|188527163|ref|YP_001909850.1| flagellar basal-body rod protein (flgG) [Helicobacter pylori
           Shi470]
 gi|188143403|gb|ACD47820.1| flagellar basal-body rod protein (flgG) [Helicobacter pylori
           Shi470]
          Length = 269

 Score =  127 bits (319), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 50/268 (18%), Positives = 100/268 (37%), Gaps = 26/268 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDID---- 53
           MQ  +     A  A   RL   ++N++N +T GF+        F  +    +  +     
Sbjct: 1   MQNGYYAATGAMAAQFNRLDLTSNNLANLNTNGFKRDDAVTGDFLRLYQQYREQLPLEDQ 60

Query: 54  ----------QKISFVASGKEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTR 102
                              + Y  + +G+F  T   LDFAL   + +FA+++  G+  TR
Sbjct: 61  TKASAKYLNRNLNRVPILSEIYTDRSLGAFEETHNPLDFALTSPNLYFAIQTNEGVAYTR 120

Query: 103 DGRFKVTDDGSLVSASGKYP------VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156
           DG F V  DG LV+ +G               + +   + +   N       ++      
Sbjct: 121 DGHFSVDKDGFLVTLNGFRVLSRSGLNEKGGIMLMPNAEIEVNQNGEITFRDNEAPIQAG 180

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
            + L S    +   +   +  +        +     ++++  LE SN N++ EM  +I +
Sbjct: 181 ALALVSFSEPKNLKKIGQNLYTYQGEGV-HQISDSGSLRQYMLEKSNVNAVREMSALIGI 239

Query: 217 TQKFNSITTLIDE-NEKSMLEAIRNIAS 243
            +  +  + ++    +    EAI  +A+
Sbjct: 240 NRFLDMYSKVLKTHQDDMNAEAINKLAA 267


>gi|254779049|ref|YP_003057154.1| Flagellar basal-body rod protein FlgG (Distal rod protein)
           [Helicobacter pylori B38]
 gi|254000960|emb|CAX28904.1| Flagellar basal-body rod protein FlgG (Distal rod protein)
           [Helicobacter pylori B38]
          Length = 269

 Score =  127 bits (318), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 53/268 (19%), Positives = 97/268 (36%), Gaps = 26/268 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDID---- 53
           MQ  +     A      RL   ++N++N +T GF+        F  +    +  +     
Sbjct: 1   MQNGYYAATGAMATQFNRLDLTSNNLANLNTNGFKRDDAITGDFLRLYQQYREQLPLEDQ 60

Query: 54  ----------QKISFVASGKEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTR 102
                              + Y  + +G+F  T   LDFAL   + +FA+++  G+  TR
Sbjct: 61  TKASAKYLNRNLNRVPILSEIYTDRSLGAFEGTNNPLDFALTSPNLYFAIQTNEGVAYTR 120

Query: 103 DGRFKVTDDGSLVSASGKYP---VLDMASVPIQIPQKDEIFNVGEKGEISQKGK---VIA 156
           DG F V  DG LV+ +G              I +    EI      G   +  +      
Sbjct: 121 DGHFSVDKDGFLVTLNGFKVLSRSGLNEKGGIMLMPDAEIEVDQNGGITFRDNEAQIQAG 180

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
            + L S    +   +   +           +      +K+  LE SN N++ EM  +I +
Sbjct: 181 ALALVSFSEPKNLKKIGQNLYIYQGEGV-HQVSDSGALKQYMLEKSNVNAVREMSALIEI 239

Query: 217 TQKFNSITTLIDE-NEKSMLEAIRNIAS 243
            +  +  + ++    +    EAI  +A+
Sbjct: 240 NRFLDMYSKVLKTHQDDMNAEAINKLAT 267


>gi|321313188|ref|YP_004205475.1| flagellar basal-body rod protein [Bacillus subtilis BSn5]
 gi|320019462|gb|ADV94448.1| flagellar basal-body rod protein [Bacillus subtilis BSn5]
          Length = 270

 Score =  127 bits (318), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 48/272 (17%), Positives = 103/272 (37%), Gaps = 34/272 (12%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVV----------GA 47
           M        +A +A ++R   +++N++N +T G++  +     F E++          G 
Sbjct: 1   MLKGLYTATSAMIAQQRRTEMLSNNIANANTSGYKADQGSMRAFPEMLLSRIESKSPAGT 60

Query: 48  IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA-------------WFALES 94
            + +I    + V   +       GS  ST    D AL  +              ++ +++
Sbjct: 61  SRTEIGSVNTGVYMQELKPLFTQGSLKSTDQPTDIALIENQVPMNAETNEKAALFYPVQT 120

Query: 95  PRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV 154
             GI  ++   F + ++ + ++ +G+  +         I   +E F V E G ++  G+ 
Sbjct: 121 AGGIRYSKSSTFSLNEN-NQLTINGRPILSTDRQP---ITVDNENFTVSENGTVTTNGRT 176

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNI----PPTPLEDLSGVTVKRGFLEDSNANSMYEM 210
              + +   +  +   R  N   S       P     +    ++K+G  E SN +     
Sbjct: 177 AGQIDIRMAEDVRNLKRDGNDLYSTADGNDLPSAAGNNQVSYSLKQGVSELSNVDVTSAY 236

Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            +M    + F +   +I   +KSM +A   I 
Sbjct: 237 TEMTEAYRSFEANQKVIQAYDKSMDKAANEIG 268


>gi|313497763|gb|ADR59129.1| Flagellar basal body rod protein FlgF [Pseudomonas putida BIRD-1]
          Length = 246

 Score =  127 bits (318), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 46/246 (18%), Positives = 93/246 (37%), Gaps = 9/246 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + +             A+N++N  T GF+    +   +   +  D     +F  
Sbjct: 1   MDKLLYVAMTGASQNALAQKAHANNLANISTNGFQRDLEQARSM--PVFGDSFPARAFAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           + +       G  + TG +LD A+ G  + A+++P       R G   +   G L + +G
Sbjct: 59  TERPATDFSEGPLVETGRDLDVAVTGKGFVAVQAPDGSEAYVRTGSLNIDALGVLRAGNG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV---IATMGLYSVDMSQGFVRRENSG 176
              + +   + I   QK E+   G     S             +  V+     + +   G
Sbjct: 119 MPVIGNGGPIAIPPEQKVEVGADGTISIRSMGEDPRVMAEVDRIKLVNPDTKGLTKGLDG 178

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN---EKS 233
           +       P +    V V  GFLE SN N++ EM  ++ L+++F     +++     +++
Sbjct: 179 LIHTTSGQPADADVNVRVVAGFLEGSNVNAVEEMTSVLALSRQFELHVKMMNTAKEGDEA 238

Query: 234 MLEAIR 239
           M   ++
Sbjct: 239 MARVLQ 244


>gi|326404070|ref|YP_004284152.1| flagellar basal-body rod protein FlgF [Acidiphilium multivorum
           AIU301]
 gi|325050932|dbj|BAJ81270.1| flagellar basal-body rod protein FlgF [Acidiphilium multivorum
           AIU301]
          Length = 247

 Score =  127 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 55/245 (22%), Positives = 104/245 (42%), Gaps = 8/245 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFR----TIKVKFSEVVGAIKNDIDQKI 56
           MQ +  I L+  L   + +  +A+N++N  T G+             +           +
Sbjct: 1   MQNTSTIILSRMLTASRNVDVIANNIANVSTPGYESMHLASTTWLDHMRNVTAPPGGSTL 60

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVS 116
           ++  S   +  +  G+  +TG  LD AL G  +F +++P G  LTRDG+F +  DG++ +
Sbjct: 61  AYTQSNGTWRDERPGAIRNTGNALDLALPGGGYFTVQTPNGPRLTRDGQFNLMPDGTIAN 120

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           A+G    L     PI +P +     +   G IS    +I  +G+ +V   Q    +  + 
Sbjct: 121 ANGYSL-LSTNGQPITVPPQSGTLTIAADGTISTPQGIIGQVGVVTVPDQQSLTAQGRNL 179

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
              +  P P        + +G +E+SN   + E+  MI  ++ +  +   +   +     
Sbjct: 180 FKASTTPIP---DPNPQIVQGAIEESNVQPVVEITNMIQASRNYEMLAQFLASEKNRSQT 236

Query: 237 AIRNI 241
           AI  I
Sbjct: 237 AISQI 241


>gi|308071138|ref|YP_003872743.1| flagellar basal body rod protein [Paenibacillus polymyxa E681]
 gi|305860417|gb|ADM72205.1| Flagellar basal body rod protein [Paenibacillus polymyxa E681]
          Length = 275

 Score =  127 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 51/276 (18%), Positives = 102/276 (36%), Gaps = 34/276 (12%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S    + +  +++QRL  +ADN++N +TVG+++ +  F +V+  ++           
Sbjct: 1   MNNSMIGAMVSMASVQQRLDLIADNIANINTVGYKSKQGSFEDVLANVQQQPSTYLQNGR 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107
                      V +     + E G    TG   D A++G+A F ++       TRDG F 
Sbjct: 61  AMPLGYNLGYGVKTAAIMKNMEQGPLKETGLPTDLAIQGNAMFEVQGNGQKAWTRDGSFH 120

Query: 108 V------TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL- 160
                  +    L +A G   + +               +   +  I   G    T+G  
Sbjct: 121 FVPDPNDSATMMLTTAEGYSVLDNNDVPVTAPAGSKVAISSDGELLIRANGTGAPTVGQR 180

Query: 161 ---YSVDMSQGFVRRENSGI----------SPNIPPTPLEDLSGVTVKRGFLEDSNANSM 207
                V   +G  +R+++                        + V+V+ G+LE+SN +  
Sbjct: 181 IKLMDVQRPEGLEQRDDNLFVLLNGVTEANVFGAAGVAGAVPADVSVRSGYLEESNVDLA 240

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
            EM  M+ + + +      +  ++  M     N+ +
Sbjct: 241 GEMTDMMQVQRMYQMAARALTSSDTMM-NLANNLRA 275


>gi|317012196|gb|ADU82804.1| flagellar basal-body rod protein [Helicobacter pylori Lithuania75]
          Length = 269

 Score =  127 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 53/268 (19%), Positives = 99/268 (36%), Gaps = 26/268 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDID---- 53
           MQ  +     A      RL   ++N++N +T GF+        F  +    +  +     
Sbjct: 1   MQNGYYAATGAMATQFNRLDLTSNNLANLNTNGFKRDDAITGDFLRLYQQYREQLPLEDQ 60

Query: 54  ----------QKISFVASGKEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTR 102
                              + Y  + +G+F  T   LDFAL   + +FA+++  G+  TR
Sbjct: 61  TKASAKYLNRNLNRVPILSEIYTDRSLGAFEGTHNPLDFALTSPNLYFAIQTNEGVAYTR 120

Query: 103 DGRFKVTDDGSLVSASGKYP---VLDMASVPIQIPQKDEIFNVGEKGEISQKGK---VIA 156
           DG F V  DG LV+ +G              I +    EI      G   +  +      
Sbjct: 121 DGHFSVDKDGFLVTLNGFKVLSRSGLNEKGGIMLMPDAEIEVDQNGGITFRDNEAQIQAG 180

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
            + L S    +   +   +  +        +  +   +K+  LE SN N++ EM  +I +
Sbjct: 181 ALALVSFSEPKNLKKIGQNLYTYQGEGV-HQVSNSGALKQYMLEKSNVNAVREMSALIEI 239

Query: 217 TQKFNSITTLIDE-NEKSMLEAIRNIAS 243
            +  +  + ++    +    EAI  +A+
Sbjct: 240 NRFLDMYSKVLKTHQDDMNAEAINKLAT 267


>gi|212640498|ref|YP_002317018.1| flagellar hook-basal body protein [Anoxybacillus flavithermus WK1]
 gi|212561978|gb|ACJ35033.1| Flagellar hook-basal body protein [Anoxybacillus flavithermus WK1]
          Length = 274

 Score =  127 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 49/275 (17%), Positives = 98/275 (35%), Gaps = 33/275 (12%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S          L+Q+L  ++ N++N +T GF+     F E++     ++        
Sbjct: 1   MLRSMITAANTMNQLQQQLDVISHNIANVNTTGFKKRDAVFGELLAQQFTNLPTTDEAPR 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGD-AWFALESPRGIILTRDGRF 106
                            Y+  + GS + T   LD AL  +  +F +     I  TRDG F
Sbjct: 61  LTPAGVRLGVGAKVASTYMQMKQGSVVKTDRPLDLALTKEGQFFRIFVDGAIQYTRDGAF 120

Query: 107 KVTDDGS-----LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLY 161
            ++   +     ++  +  Y VL+    PI +    +   V + G +         M   
Sbjct: 121 YLSPSANNPDELMIVTADGYAVLNENDEPITVRDGFKDIQVTQNGTMQFIAPNGNIMQTV 180

Query: 162 SVDMS----QGFVRRENSGISPNIPPTPLEDL---------SGVTVKRGFLEDSNANSMY 208
           ++ +S       ++              +ED          + +++++  LE SN     
Sbjct: 181 NIGVSYITRPQLMQALGDNRFAFPNGLNVEDATINLAGNNRNNISLQQYALEQSNVELAT 240

Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           EM +++   + +      I  +++ M   I  I S
Sbjct: 241 EMSELMITQRSYQLNARAITLSDQMMG-LINGIRS 274


>gi|192290682|ref|YP_001991287.1| flagellar basal body rod protein [Rhodopseudomonas palustris TIE-1]
 gi|192284431|gb|ACF00812.1| flagellar basal body rod protein [Rhodopseudomonas palustris TIE-1]
          Length = 244

 Score =  127 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 59/224 (26%), Positives = 101/224 (45%), Gaps = 6/224 (2%)

Query: 7   IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND---IDQKISFVASGK 63
           IGL+  +AL+Q++  +A N++N +T GF+   ++F E +   K            + +  
Sbjct: 7   IGLSRLIALQQQVDNLARNVANQNTTGFKREGIRFLEYLTDAKEADDIPSAPKRSLVAVT 66

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPV 123
            Y     GS   TG   D A+  D +F + + RG   TR+G F +   G LV+ SG   +
Sbjct: 67  GYTDFSAGSLQLTGNSTDAAVLEDGFFVVRTSRGDRYTRNGAFTLDKQGRLVTLSGDLVL 126

Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183
              A+  I++P  D   ++G  G IS    +I  + +   D  +  V       +   PP
Sbjct: 127 --AANGTIKVPLTDLNLSIGTDGTISTARSIIGRLRVVKFDDPRSLVAEGTGLFASGSPP 184

Query: 184 TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
             L   S   +    LE SN NS+ EM  ++  T+ +  +  ++
Sbjct: 185 IELNAGSI-RLATNALERSNVNSIREMSDLVAATRAYEQVANVV 227


>gi|167034942|ref|YP_001670173.1| flagellar basal body rod protein FlgF [Pseudomonas putida GB-1]
 gi|166861430|gb|ABY99837.1| flagellar basal-body rod protein FlgF [Pseudomonas putida GB-1]
          Length = 246

 Score =  127 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 46/246 (18%), Positives = 93/246 (37%), Gaps = 9/246 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + +             A+N++N  T GF+    +   +   +  D     +F  
Sbjct: 1   MDKLLYVAMTGASQNALAQKAHANNLANISTNGFQRDLEQARSM--PVFGDSFPARAFAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           + +       G  + TG +LD A+ G  + A+++P       R G   +   G L + +G
Sbjct: 59  TERPATDFSEGPLVETGRDLDVAVTGKGFIAVQAPDGSEAYVRTGSLNIDALGVLRAGNG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV---IATMGLYSVDMSQGFVRRENSG 176
              + +   + I   QK E+   G     S             +  V+     + +   G
Sbjct: 119 MPVMGNGGPIAIPPEQKVEVGADGTISIRSMGEDPRVMAEVDRIKLVNPDTKGLTKGLDG 178

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN---EKS 233
           +       P +    V V  GFLE SN N++ EM  ++ L+++F     +++     +++
Sbjct: 179 LIHTTSGQPADADVNVRVVAGFLEGSNVNAVEEMTSVLALSRQFELHVKMMNTAKEGDEA 238

Query: 234 MLEAIR 239
           M   ++
Sbjct: 239 MARVLQ 244


>gi|218288303|ref|ZP_03492602.1| protein of unknown function DUF1078 domain protein
           [Alicyclobacillus acidocaldarius LAA1]
 gi|218241662|gb|EED08835.1| protein of unknown function DUF1078 domain protein
           [Alicyclobacillus acidocaldarius LAA1]
          Length = 301

 Score =  127 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 54/297 (18%), Positives = 98/297 (32%), Gaps = 58/297 (19%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50
           M  S N  ++   A +  L  V +N++N +TVGF+   V+F++++    +          
Sbjct: 1   MLRSMNSAISGMQAFQTDLDVVGNNIANVETVGFKQSDVQFADLLSQTMSLGTAGTSPST 60

Query: 51  ------------DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98
                       + +Q    V      +    G   +TG   + A++G+ +F +      
Sbjct: 61  GGSGATTGIGGTNPEQVGLGVQVAATQMDMSQGPDETTGVPTNVAIQGNGFFVVTDGTST 120

Query: 99  ILTRDGRFKVTDDGSLVSASG------------------------------KYPVLDMAS 128
            LTR G F V   G+LV  +G                                 +    +
Sbjct: 121 YLTRAGNFSVDSAGNLVLPNGVIAEGYSSSSKPSSASTTQPTTEINVYQLAGVTLGSGNT 180

Query: 129 VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP----- 183
           V       D           +   KVI  + L  V   QG V   ++  S + P      
Sbjct: 181 VSNVSIGSDGSITATITNGTTTTTKVIGYLALAQVPNPQGLVSVGDNLFSASSPAAGQPT 240

Query: 184 -TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
                  +  T+  G LE SN +   +  +MI     + + T +I  +   +   + 
Sbjct: 241 YWTPGQGTYGTLASGELEGSNVDLSQQFAEMIVAQNAYVANTHMIGTDNAILQALVN 297


>gi|153940920|ref|YP_001391955.1| flagellar hook protein flgE [Clostridium botulinum F str.
           Langeland]
 gi|152936816|gb|ABS42314.1| flagellar hook protein flgE [Clostridium botulinum F str.
           Langeland]
 gi|295319974|gb|ADG00352.1| flagellar hook protein flgE [Clostridium botulinum F str. 230613]
          Length = 345

 Score =  127 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 47/342 (13%), Positives = 97/342 (28%), Gaps = 103/342 (30%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50
           M  S   G++   A + +L  V +N++N +T  F++  ++F +++    +          
Sbjct: 1   MLRSMYSGISGLKAQQTKLDIVGNNIANANTTAFKSQSIRFQDMLSQNMSSATGPSANLG 60

Query: 51  --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP------------- 95
             +  Q    V     Y     G+  +TG  LD A++G  +F +                
Sbjct: 61  GTNPRQVGLGVQVAGIYTKFTTGNMQTTGRNLDMAVDGPGFFIVGKGDITSQTSIITEAT 120

Query: 96  --------------RGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFN 141
                           I  TRDG F + D+G+L+++ G   +    +         +   
Sbjct: 121 GDAQAGSIDGKSSTMDISFTRDGSFTLDDEGNLLTSDGFRIMGYAMTDGTGTSLAYDAGT 180

Query: 142 VGEKGEI---------------------------------------------------SQ 150
              K                                                      + 
Sbjct: 181 GEAKMAFVDADSKALKAADDSKKLIPLRIPDEIDVDGKKVRVQSFSIDKDGLLVASLVNG 240

Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIP-------------PTPLEDLSGVTVKRG 197
           K   +  + + S     G  +   +    +                    D     +  G
Sbjct: 241 KSAALGQVAMASFKNEGGLEKMGKNLYKNSANSGEAIIRTPRGTAEENRNDKGYGDMLNG 300

Query: 198 FLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +E SN +   E  +MI   + F +   +I   ++ + E + 
Sbjct: 301 MIEMSNVDLAEEFTEMIVANRAFQACGKMITTGDEILQELVN 342


>gi|330502735|ref|YP_004379604.1| flagellar basal body rod protein FlgF [Pseudomonas mendocina NK-01]
 gi|328917021|gb|AEB57852.1| flagellar basal body rod protein FlgF [Pseudomonas mendocina NK-01]
          Length = 246

 Score =  127 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 48/237 (20%), Positives = 89/237 (37%), Gaps = 6/237 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + +         L   A+N++N  T GFR    +   +   +  +      F  
Sbjct: 1   MDKMLYVSMTGAQNNTMGLRAHANNLANVSTSGFRRDFEQARSM--PLFGESYPARVFAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           S +       GS   TG +LD A+ G  W A+++P       R     +   G L + +G
Sbjct: 59  SERPATDFRPGSLQETGRDLDVAVGGKGWIAVQAPDGSEAYVRTASLNIDALGMLRTGNG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEIS---QKGKVIATMGLYSVDMSQGFVRRENSG 176
              + +   + +   QK EI   G     +       +     +  V+     + +   G
Sbjct: 119 LPVMGNAGPIAVPPEQKVEIGQDGTISIRALGENPNVLAEVDRIKLVNPDPKSMEKGTDG 178

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           +        +E  + V V  GFLE SN N++ EM  ++ L+++F     ++   E +
Sbjct: 179 LIRVKGQPEVEADATVQVTSGFLEASNVNAVEEMTAILSLSRQFELSVKMMRTAEDN 235


>gi|308175373|ref|YP_003922078.1| flagellar hook-basal body protein [Bacillus amyloliquefaciens DSM
           7]
 gi|307608237|emb|CBI44608.1| putative flagellar hook-basal body protein [Bacillus
           amyloliquefaciens DSM 7]
 gi|328555347|gb|AEB25839.1| flagellar basal body rod protein FlgG [Bacillus amyloliquefaciens
           TA208]
          Length = 273

 Score =  127 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 55/274 (20%), Positives = 104/274 (37%), Gaps = 33/274 (12%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  S      A   L+Q++ TV+ N+SN+DT G++    +FSE++    + ID K     
Sbjct: 1   MLRSMLAASTALNQLQQQMDTVSSNLSNSDTTGYKARDSRFSELIRQQYDQIDDKKENSP 60

Query: 61  SGKEYLS---------------KEVGSFISTGTELDFALEGDA-WFALESPRGIILTRDG 104
           + ++                     GS   T  +LD A      +   E+    + TRDG
Sbjct: 61  NMRKTPPGLRLGAGAMMTPQLDSGQGSIKKTDRDLDIAFTSPYQYLQAEAGGRRVYTRDG 120

Query: 105 RFKVTDDGS-----LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV----- 154
              +   G       +  +G  P+LD    PIQI        + + G ++   +      
Sbjct: 121 SLTLKPAGGNDRLLQLMTAGGNPILDENGQPIQIDSSLTKLKISKTGTLTASDQTGTRSQ 180

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPT------PLEDLSGVTVKRGFLEDSNANSMY 208
              +G+ +V+  Q      ++  S N                 + +++G LE+SN +   
Sbjct: 181 TFNLGIVNVNNPQELHAEGDNLFSVNGTGASAIEELTGAKRQEIGMEQGALENSNVDMSK 240

Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           EM  +I   + +   +  I   ++ +   I ++ 
Sbjct: 241 EMTDLIVSQRSYQLNSRTITLGDQMLG-LINSVR 273


>gi|266621944|ref|ZP_06114879.1| flagellar basal-body rod protein FlgG [Clostridium hathewayi DSM
           13479]
 gi|288866378|gb|EFC98676.1| flagellar basal-body rod protein FlgG [Clostridium hathewayi DSM
           13479]
          Length = 246

 Score =  127 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 54/249 (21%), Positives = 97/249 (38%), Gaps = 12/249 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIK---VKFSEVVGAIKNDIDQKIS 57
           M + F    +  L  ++ L+  A+N++N  T G+R+ +     F E +    N     I 
Sbjct: 1   MFSGFYTAASGVLMNQRALNISANNIANVKTSGYRSKRLVKTTFDEQLVRQMNGQTTAIG 60

Query: 58  FVAS----GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113
             ++     +E  +   G+ + TG   D A+ GD  F ++      LTR+G F   +DG 
Sbjct: 61  GGSTISLAEREMTTHRQGALVDTGKNFDMAISGDGLFVIQGEDRQYLTRNGHFTQDEDGY 120

Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRE 173
           LV       + D       I  ++  F VGE G I              V  +   +   
Sbjct: 121 LVLKGVGQVMGDG----GPIQVEEGGFRVGENGIIYDNENGELEQIQIVVPDNYDNLTFY 176

Query: 174 NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           ++G         L  +    V +G LE+S  N   EM + + + + F S +  +   ++ 
Sbjct: 177 DNGTYGAENGVALTQV-YPEVFQGKLEESGVNLNSEMTRAMEVQRAFQSCSRALTIIDQM 235

Query: 234 MLEAIRNIA 242
             ++   I 
Sbjct: 236 NQKSASEIG 244


>gi|326386931|ref|ZP_08208545.1| Flagellar basal-body rod FlgF [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326208611|gb|EGD59414.1| Flagellar basal-body rod FlgF [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 247

 Score =  126 bits (317), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 40/240 (16%), Positives = 83/240 (34%), Gaps = 6/240 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M        +   A   +   +A+NM+N+ T GFR   +  +    ++K    +  +   
Sbjct: 1   MDRLIYTAYSGMSASMVQQRVIANNMANSQTTGFRAEML--AATPVSLKGSGLEARAMTD 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASG 119
           +     S + G    TG  LD A  GD   A++        TR G      +G LV+   
Sbjct: 59  AEVRGASMKQGEMTQTGNPLDVAFNGDTMMAVQARDGTEAYTRRGDLTADANGMLVNGDN 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ---GFVRRENSG 176
              + +   + + +  K  I   G                +  + ++      + +   G
Sbjct: 119 APVLGESGPITVPLGSKLTISPDGTVLANDPANPDQPPNAVGRIKLASYTGSQIEKGLDG 178

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           +   +    L       +  G LE SN +    + +M+   + F+  T ++    ++  +
Sbjct: 179 LFRVVGGGALPADENAKLVSGALEKSNVDPTSVLVEMVEAQRLFDMRTKVVSTARENDEK 238


>gi|317013797|gb|ADU81233.1| flagellar basal-body rod protein [Helicobacter pylori Gambia94/24]
          Length = 269

 Score =  126 bits (317), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 52/268 (19%), Positives = 100/268 (37%), Gaps = 26/268 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           MQ  +     A      RL   ++N++N +T GF+       + +   +   +Q      
Sbjct: 1   MQNGYYAATGAMATQFNRLDLTSNNLANLNTNGFKRDDAITGDFLRLYQEYREQLPLEDQ 60

Query: 61  SG-----------------KEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTR 102
           +                  + Y  + +G+F  T   LDFAL   + +FA+++  G+  TR
Sbjct: 61  TKASAKYLNRNLNRVPILSEIYTDRSLGAFEGTNNPLDFALTSPNLYFAIQTNEGVAYTR 120

Query: 103 DGRFKVTDDGSLVSASGKYP---VLDMASVPIQIPQKDEIFNVGEKGEISQKGK---VIA 156
           DG F V  DG LV+ +G              I +    EI      G   +  +      
Sbjct: 121 DGHFSVDKDGFLVTLNGFKVLSRSGLNEKGGIMLMPDAEIEVDQNGGITFRDNEAQIQAG 180

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
            + L S    +   +   +  +        +      +++  LE SN N++ EM  +I +
Sbjct: 181 ALALVSFSEPKNLKKIGQNLYTYQGEGI-HQVSDSGALRQSMLEKSNVNAVREMSALIEI 239

Query: 217 TQKFNSITTLIDE-NEKSMLEAIRNIAS 243
            +  +  + ++    +    EAI  +A+
Sbjct: 240 NRFLDMYSKVLKTHQDDMNAEAINKLAT 267


>gi|170737039|ref|YP_001778299.1| flagellar basal-body rod protein FlgF [Burkholderia cenocepacia
           MC0-3]
 gi|169819227|gb|ACA93809.1| flagellar basal-body rod protein FlgF [Burkholderia cenocepacia
           MC0-3]
          Length = 241

 Score =  126 bits (317), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 52/242 (21%), Positives = 92/242 (38%), Gaps = 5/242 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       +       + L+  A+N+SN  T GFR      +    A +           
Sbjct: 1   MDNFLYTAMTGAEHSLRALNVRANNLSNAQTSGFRADLASVTS--QAARGYGYDSRYHAT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
               +++ E G    TG  LD A++G  + A+E+ +G+  TR G   +  DG  ++ +G 
Sbjct: 59  LTSTHVNPEPGKISETGRTLDVAIDGGGYLAVETAQGVAYTRAGALTLDGDG-ALTLNGN 117

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ-GFVRRENSGISP 179
             + +   + +       I   G    ++   K I   G   +       + +   G+  
Sbjct: 118 AVLGEGGPIVLPEHDALTIGADGTISVVTAGEKDIQDAGRLLLVNPDPADLVKNAQGLIV 177

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +   T       VTVK G LE SN +++ EM Q + LT+ F     L    ++    A  
Sbjct: 178 SRTGTDYAADDSVTVKGGHLEASNVSAVEEMMQTMSLTRSFEMQMKLYKVADEMAD-AGN 236

Query: 240 NI 241
            +
Sbjct: 237 RL 238


>gi|317010632|gb|ADU84379.1| flagellar basal-body rod protein [Helicobacter pylori SouthAfrica7]
          Length = 269

 Score =  126 bits (317), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 54/268 (20%), Positives = 98/268 (36%), Gaps = 26/268 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDID---- 53
           MQ  +     A      RL   ++N++N +T GF+        F  +    +  +     
Sbjct: 1   MQNGYYAVAGAMATQFNRLDLTSNNLANLNTNGFKRDDTITGDFLRLYQQYREQLPLEDQ 60

Query: 54  ----------QKISFVASGKEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTR 102
                              + Y  K +G+F  T   LDFAL   + +FA+++  GI  TR
Sbjct: 61  TKASAKYLNRNLNRVPILSEIYTDKSLGAFEETHNPLDFALTSPNLYFAIQTNEGIAYTR 120

Query: 103 DGRFKVTDDGSLVSASGKYP---VLDMASVPIQIPQKDEIFNVGEKG---EISQKGKVIA 156
           DG F V  DG LV+ +G              I +    EI      G     ++      
Sbjct: 121 DGHFSVDKDGFLVTLNGFKVLSRSGLNEQGGIMLMPNAEIEVDQNGGITFRDNEAPIQAG 180

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
            + L S    +   +   +  +        +      +++  LE SN N++ EM  +I +
Sbjct: 181 ALALVSFSEPKNLKKIGQNLYAYQGEGI-HQVSDSGALRQYMLEKSNVNAVREMSTLIEI 239

Query: 217 TQKFNSITTLIDE-NEKSMLEAIRNIAS 243
            +  +  + ++    +    EAI  +A+
Sbjct: 240 NRFLDMYSKVLKTHQDDMNAEAINKLAT 267


>gi|104782841|ref|YP_609339.1| flagellar basal body rod protein FlgF [Pseudomonas entomophila L48]
 gi|95111828|emb|CAK16552.1| flagellar basal-body rod protein FlgF [Pseudomonas entomophila L48]
          Length = 246

 Score =  126 bits (317), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 50/245 (20%), Positives = 95/245 (38%), Gaps = 6/245 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + +             A+N++N  T GF+    +   +   +  D     +F  
Sbjct: 1   MDKMLYVAMTGASQNALAQKAHANNLANVSTNGFQRDLEQARSM--PVFGDSFPARAFAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           S +       G  + TG ELD A+ GD + A+++P       R G   +   G L + +G
Sbjct: 59  SERPATDFRAGPLVETGRELDVAVSGDGFMAVQAPDGSEAYVRTGSLNIDALGVLRAGNG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQ--KGKVIATMGLYSVDMSQ-GFVRRENSG 176
              + +   + I   QK E+ + G     +     +V+A +    +       + +   G
Sbjct: 119 MAVMGNGGPIAIPPQQKVEVGDDGTISIRAMGEDPRVMAEVDRIKLVNPDIKNMTKGPDG 178

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           +       P +    V V  GFLE SN N++ EM  ++ L+++F     ++   E+    
Sbjct: 179 LIHTKNGQPADADVNVRVVSGFLEGSNVNAVEEMTSVLALSRQFELHVKMMKAAEEGDQA 238

Query: 237 AIRNI 241
             R +
Sbjct: 239 MARVL 243


>gi|148266214|ref|YP_001232920.1| hypothetical protein Gura_4204 [Geobacter uraniireducens Rf4]
 gi|146399714|gb|ABQ28347.1| protein of unknown function DUF1078 domain protein [Geobacter
           uraniireducens Rf4]
          Length = 294

 Score =  126 bits (317), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 44/286 (15%), Positives = 99/286 (34%), Gaps = 50/286 (17%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +   G++  L   + ++ + +N+SN +T+GF+  +  FS+++ A   +  Q    V   K
Sbjct: 6   AMFTGVSGLLNNGEAMNVIGNNISNVNTIGFKYGRTLFSDMLSANIGNDSQVGRGVQMQK 65

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRG---------IILTRDGRFKVTDDGSL 114
                   S+ +T    D  ++G+++FAL+ P            +L+R G F V    ++
Sbjct: 66  VENIFGSSSYENTENVTDLGIQGNSFFALKPPTTAAPVAAQNAALLSRAGAFHVDKTLTM 125

Query: 115 VSASGKYPVLDMASVPIQ----------------IPQKDEIFNVGEKGEISQKGKVIATM 158
           V+  G   +    +                    I     I  + + G  +        +
Sbjct: 126 VNPDGYQVLDTAGNPIQFSNTGAAPATDFAKIVKIEPNGLITYLAQDGITTNYYNASGGV 185

Query: 159 GLYSVDMSQ---------------GFVRRENSGISPNIPP----------TPLEDLSGVT 193
           G+ +   +                G  +   S  +P                  + +   
Sbjct: 186 GVATTPANAATVQRLAVVSAADVTGLEKAGGSLYTPTASSGVSAAAFSLAGNQPNGTSEK 245

Query: 194 VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +    LE SN +   +  +MI   + +++ +  I   ++   E + 
Sbjct: 246 ILSNSLEQSNVDMASQFVKMIITQRAYSANSKTITTADEMTQEILS 291


>gi|308175374|ref|YP_003922079.1| flagellar basal-body rod protein [Bacillus amyloliquefaciens DSM 7]
 gi|307608238|emb|CBI44609.1| putative flagellar basal-body rod protein [Bacillus
           amyloliquefaciens DSM 7]
 gi|328555348|gb|AEB25840.1| flagellar basal-body rod protein [Bacillus amyloliquefaciens TA208]
 gi|328913716|gb|AEB65312.1| putative flagellar basal-body rod protein [Bacillus
           amyloliquefaciens LL3]
          Length = 265

 Score =  126 bits (317), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 44/267 (16%), Positives = 96/267 (35%), Gaps = 29/267 (10%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKND-----I 52
           M        +A +  ++R   +++N++N +T G++  +     F E++ +         I
Sbjct: 1   MLKGLYTATSAMITQQRRTEMLSNNIANANTSGYKEDQGSIRAFPEMLLSRIEGDKKTKI 60

Query: 53  DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA-------------WFALESPRGII 99
               + V   +       GS  +T    D AL  +              ++ +++  G+ 
Sbjct: 61  GSVNTGVYMQELKPLFTQGSLKTTDQPTDIALMENQVPKNAETNENAELFYPVQTAGGVR 120

Query: 100 LTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG 159
            ++   F +  + + ++ +G   +         I   +E F V E G ++  G+    + 
Sbjct: 121 YSKSSTFSLNQN-NQLTINGNLVLSTNGQP---ITVDNEKFTVSENGTVTSNGRQAGRID 176

Query: 160 LYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTV----KRGFLEDSNANSMYEMGQMIH 215
           +   +  +   R  N   S           +   V    K+G  E SN +      +M  
Sbjct: 177 IRMEEDVRNLKRDGNDLYSTADGSELPSAAANPQVSYSLKQGVSELSNVDVTSTYTEMTE 236

Query: 216 LTQKFNSITTLIDENEKSMLEAIRNIA 242
             + F +   +I   +KSM +A   I 
Sbjct: 237 AYRSFEANQKVIQAYDKSMDKAANEIG 263


>gi|256020229|ref|ZP_05434094.1| flagellar basal body rod protein FlgF [Shigella sp. D9]
 gi|260853467|ref|YP_003227358.1| putative lateral flagellar component of cell-proximal portion of
           basal-body rod [Escherichia coli O26:H11 str. 11368]
 gi|260866414|ref|YP_003232816.1| putative lateral flagellar component of cell-proximal portion of
           basal-body rod [Escherichia coli O111:H- str. 11128]
 gi|332281391|ref|ZP_08393804.1| lateral flagellar rod protein [Shigella sp. D9]
 gi|257752116|dbj|BAI23618.1| predicted lateral flagellar component of cell-proximal portion of
           basal-body rod [Escherichia coli O26:H11 str. 11368]
 gi|257762770|dbj|BAI34265.1| predicted lateral flagellar component of cell-proximal portion of
           basal-body rod [Escherichia coli O111:H- str. 11128]
 gi|323158102|gb|EFZ44201.1| flagellar basal-body rod protein FlgF [Escherichia coli EPECa14]
 gi|323178493|gb|EFZ64071.1| flagellar basal-body rod protein FlgF [Escherichia coli 1180]
 gi|323181548|gb|EFZ66968.1| flagellar basal-body rod protein FlgF [Escherichia coli 1357]
 gi|332103743|gb|EGJ07089.1| lateral flagellar rod protein [Shigella sp. D9]
          Length = 245

 Score =  126 bits (317), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 47/237 (19%), Positives = 84/237 (35%), Gaps = 7/237 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       L+            A+N++N +T GFR            +K           
Sbjct: 1   MDRLIYTALSGASQTLYEQQISANNLANVNTNGFRADMAM--ATNDKVKGGGFDTRYMAQ 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119
            G   ++   G    T   LD A++G  + A  +     + TR+G  +  D G  ++  G
Sbjct: 59  EGASGVNDSTGVAEKTERPLDVAIQGAGYIAVQDKNGNEVYTRNGNIQQDDQG-QLTIDG 117

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176
              + D   + +         + G        G V ATM +     VD+    + +   G
Sbjct: 118 NLVLGDNGPIILPPNAIASFGSDGTLSVTPDDGDVTATMDIDRLKLVDIPVANLEKNAEG 177

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           +       P +    + V  GFLE SN +++ EM   I + ++F +   ++   E  
Sbjct: 178 MLVTADGVPAQRDENIKVSGGFLEGSNVSAVSEMMSSIAMNRQFEAQIKMMKTAEDI 234


>gi|306813302|ref|ZP_07447495.1| flagellar basal body rod protein FlgF [Escherichia coli NC101]
 gi|305854065|gb|EFM54504.1| flagellar basal body rod protein FlgF [Escherichia coli NC101]
          Length = 245

 Score =  126 bits (317), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 47/237 (19%), Positives = 84/237 (35%), Gaps = 7/237 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       L+            A+N++N +T GFR            +K           
Sbjct: 1   MDRLIYTALSGASQTLYEQQISANNLANVNTNGFRADMAM--ATNDKVKGGGFDTRYMAQ 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119
            G   ++   G    T   LD A++G  + A  +     + TR+G  +  D G  ++  G
Sbjct: 59  EGVSGVNDSTGVAEKTERPLDVAIQGAGYIAVQDKNGNEVYTRNGNIQQDDQG-QLTIDG 117

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176
              + D   + +         + G        G V ATM +     VD+    + +   G
Sbjct: 118 NLVLGDNGPIILPPNAIASFGSDGTLSVTPDDGDVTATMDIDRLKLVDIPVANLAKNPEG 177

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           +       P +    + V  GFLE SN +++ EM   I + ++F +   ++   E  
Sbjct: 178 MLVTADGVPAQRDENIKVSGGFLEGSNVSAVSEMMSSIAMNRQFEAQIKMMKTAEDI 234


>gi|197120190|ref|YP_002140617.1| flagellar hook protein FlgE [Geobacter bemidjiensis Bem]
 gi|197089550|gb|ACH40821.1| flagellar hook protein FlgE [Geobacter bemidjiensis Bem]
          Length = 294

 Score =  126 bits (317), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 38/290 (13%), Positives = 87/290 (30%), Gaps = 50/290 (17%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
           ++   G++  L   + ++ + +N+SN +TVG++  +  FS+++     +  Q    V   
Sbjct: 5   SALYTGVSGLLQNGEAMNVIGNNISNVNTVGYKGARTLFSDMLSQNVGNNSQIGKGVQMQ 64

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALES---------PRGIILTRDGRFKVTDDGS 113
                   GS  ++    D A++G+++FAL+               L+R G F    +  
Sbjct: 65  AVQNVFSQGSTQTSENVTDLAIQGNSFFALKPSTAAAPVAAQSSAFLSRAGAFHTDSNLY 124

Query: 114 LVSASGKYPVLDMASVPIQI-------------------------------PQKDEIFNV 142
           LV+  G   +    +    +                                       V
Sbjct: 125 LVNPDGYQVLDTAGNPIKFLNSGAAPATDFGKVLSIDNTGLITYLATDGITQNYYSTSGV 184

Query: 143 GEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP----------TPLEDLSGV 192
                          + + +        +   S                      +    
Sbjct: 185 AGVATTPAAAAAAQKVAVVTAPDPTALKKVGGSLYQATTTSGVSAAGFSLAANKANGVSE 244

Query: 193 TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            +    LE S  +   E  +MI   + +++ +  I  +++   E +  I 
Sbjct: 245 QILSNTLEQSTVDLANEFVKMITTQRAYSANSKTITTSDQMTQEVLSLIR 294


>gi|209695761|ref|YP_002263691.1| flagellar basal body rod protein FlgF [Aliivibrio salmonicida
           LFI1238]
 gi|208009714|emb|CAQ80018.1| flagellar basal-body rod protein FlgF [Aliivibrio salmonicida
           LFI1238]
          Length = 241

 Score =  126 bits (317), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 54/233 (23%), Positives = 98/233 (42%), Gaps = 11/233 (4%)

Query: 9   LAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSK 68
           ++      Q +   ++N++N  T GFR    +   +      +      F  + +   + 
Sbjct: 1   MSGAKQNMQAMQLSSNNLANVSTTGFRADLEQARAM--QAYGEGLPSRVFSMTERPGQNF 58

Query: 69  EVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYPVLDMA 127
             GS I+TG +LD  +EGD W ++        LTR G  K+ + G L++ SG + V+   
Sbjct: 59  AQGSVITTGRDLDLTIEGDGWISVMDNTGREGLTRAGNLKIDETGLLMNGSG-HLVMGEN 117

Query: 128 SVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRRENSGISPN 180
           + PI +P       + + G IS   +      +  VD        ++   +  N      
Sbjct: 118 NAPITLPLPISKIQIAKDGTISVLEQGAPAEAMAEVDRIKLVKTDNRDLFKDTNGLFRSK 177

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
            P    +  + VTV +G LE SN N++ EM  +I L ++F     ++   E+ 
Sbjct: 178 NPNNAFQADASVTVLKGALEGSNVNAVGEMTNLIDLQRQFEMQVKMMSTAEEM 230


>gi|170021359|ref|YP_001726313.1| flagellar basal body rod protein FlgF [Escherichia coli ATCC 8739]
 gi|169756287|gb|ACA78986.1| flagellar basal-body rod protein FlgF [Escherichia coli ATCC 8739]
          Length = 245

 Score =  126 bits (316), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 47/237 (19%), Positives = 84/237 (35%), Gaps = 7/237 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       L+            A+N++N +T GFR            +K           
Sbjct: 1   MDRLIYTALSGASQTLYEQQISANNLANVNTNGFRADMAM--ATNDKVKGGGFDTRYMAQ 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119
            G   ++   G    T   LD A++G  + A  +     + TR+G  +  D G  ++  G
Sbjct: 59  EGASGVNDSTGVAEKTERPLDVAIQGAGYIAVQDKNGNEVYTRNGNIQQDDQG-QLTIDG 117

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176
              + D   + +         + G        G V ATM +     VD+    + +   G
Sbjct: 118 NLVLGDNGPIILPPNAIASFGSDGTLSVTPDDGDVTATMDIDRLKLVDIPVANLAKNPEG 177

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           +       P +    + V  GFLE SN +++ EM   I + ++F +   ++   E  
Sbjct: 178 MLVTADGVPAQRDENIKVSGGFLEGSNVSAVSEMMSSIAMNRQFEAQIKMMKTAEDI 234


>gi|331666547|ref|ZP_08367421.1| putative flagella basal body rod protein [Escherichia coli TA271]
 gi|331065771|gb|EGI37655.1| putative flagella basal body rod protein [Escherichia coli TA271]
          Length = 245

 Score =  126 bits (316), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 47/237 (19%), Positives = 84/237 (35%), Gaps = 7/237 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       L+            A+N++N +T GFR            +K           
Sbjct: 1   MDRLIYTALSGASQTLYEQQISANNLANVNTNGFRADMAM--ATNDKVKGGGFDTRYMAQ 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119
            G   ++   G    T   LD A++G  + A  +     + TR+G  +  D G  ++  G
Sbjct: 59  EGASGVNDSTGVAEKTERPLDVAIQGAGYIAVQDKNGNEVYTRNGNIQQDDQG-QLTIDG 117

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176
              + D   + +         + G        G V ATM +     VD+    + +   G
Sbjct: 118 NLVLGDNGPIILPPNAIASFGSDGTLSVTPDDGDVTATMDIDRLKLVDIPVANLAKNAEG 177

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           +       P +    + V  GFLE SN +++ EM   I + ++F +   ++   E  
Sbjct: 178 MLVTADGFPAQRDENIKVSGGFLEGSNVSAVSEMMSSIAMNRQFEAQIKMMKTAEDI 234


>gi|293408368|ref|ZP_06652207.1| conserved hypothetical protein [Escherichia coli B354]
 gi|291471546|gb|EFF14029.1| conserved hypothetical protein [Escherichia coli B354]
          Length = 245

 Score =  126 bits (316), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 47/237 (19%), Positives = 84/237 (35%), Gaps = 7/237 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       L+            A+N++N +T GFR            +K           
Sbjct: 1   MDRLIYTALSGASQTLYEQQISANNLANVNTNGFRADMAM--ATNDKVKGGGFDTRYMAQ 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119
            G   ++   G    T   LD A++G  + A  +     + TR+G  +  D G  ++  G
Sbjct: 59  EGASGVNDSTGVAEKTERPLDVAIQGAGYIAVQDKNGNEVYTRNGNIQQDDQG-QLTIDG 117

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176
              + D   + +         + G        G V ATM +     VD+    + +   G
Sbjct: 118 NLVLGDNGPIILPPNAIASFGSDGTLSVTPDDGDVTATMDIDRLKLVDIPVANLAKNGEG 177

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           +       P +    + V  GFLE SN +++ EM   I + ++F +   ++   E  
Sbjct: 178 MLITADGVPAQRDENIKVSGGFLEGSNVSAVSEMMSSIAMNRQFEAQIKMMKTAEDI 234


>gi|171321213|ref|ZP_02910183.1| protein of unknown function DUF1078 domain protein [Burkholderia
           ambifaria MEX-5]
 gi|171093523|gb|EDT38693.1| protein of unknown function DUF1078 domain protein [Burkholderia
           ambifaria MEX-5]
          Length = 258

 Score =  126 bits (316), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 41/250 (16%), Positives = 83/250 (33%), Gaps = 16/250 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA---------IKND 51
           M   F IG     A +  + T A N++N +T  F+   V FS ++ +             
Sbjct: 1   MNNLFYIGATGLAAQQTAVDTTAQNIANLNTPAFKRGAVTFSTLLSSGALPGARQENAAP 60

Query: 52  IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTD 110
                    +         G+   T    D A+  + +  L++P   I+L R GR +V D
Sbjct: 61  AGIAGGAGVTASARPVFSPGTLRQTDDTWDLAIRSEGFVELDAPDGNIMLWRGGRLRVGD 120

Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDMSQGF 169
           DG L +++G      ++        +      V            +  + +      +  
Sbjct: 121 DGYLRASNGVPLKAAISVPRDAERLEIAPDGKVLAMIPNQAAPLEVGRIEIAQATDPRAL 180

Query: 170 VRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224
               +                  + +  T+ +GF E SN     E+  ++   + + +  
Sbjct: 181 QPLGDGTYRIADEGAAVIRSRPGEDNAGTLAQGFSEASNVALADELAGLMLYQRAYAASA 240

Query: 225 TLIDENEKSM 234
            L+   ++ M
Sbjct: 241 KLVQAGDELM 250


>gi|312884833|ref|ZP_07744525.1| putative flagellar basal-body rod protein [Vibrio caribbenthicus
           ATCC BAA-2122]
 gi|309367485|gb|EFP95045.1| putative flagellar basal-body rod protein [Vibrio caribbenthicus
           ATCC BAA-2122]
          Length = 243

 Score =  126 bits (316), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 51/243 (20%), Positives = 102/243 (41%), Gaps = 6/243 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M +      +    + +     A+N+SN DT GFR    + S V   +K       + V 
Sbjct: 1   MDSLLFTAASGASRVLKAQHVRANNLSNADTAGFRADMERVSSV--PLKGAGFDGRTMVV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +       + G  + TG  LD A+ G+ +FA+++P      TR G  KV + G  V+ +G
Sbjct: 59  TNSASTRFDAGDMVKTGRALDAAIMGEGYFAVQTPNGEEAYTRAGNLKVDEFG-AVTVNG 117

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178
              + D   + +   QK +I   G         G  +   GL  V      + +++ G+ 
Sbjct: 118 FAVIGDGGPLVLPDYQKIQISERGVISLTPPGGGAEVNAGGLKLVKPEPNQLEKQSDGLL 177

Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            ++   P +    V V    +E SN +++ E+  ++ L++ F     ++    +++ ++ 
Sbjct: 178 HSVTGNPFDADPLVQVAPEHIEGSNVSAIDELVNVMSLSRNFEMQFRMMKTA-ETLAKSG 236

Query: 239 RNI 241
             +
Sbjct: 237 NKL 239


>gi|307637047|gb|ADN79497.1| flagellar basal-body rod protein [Helicobacter pylori 908]
 gi|325995639|gb|ADZ51044.1| Flagellar basal-body rod protein [Helicobacter pylori 2018]
 gi|325997235|gb|ADZ49443.1| Flagellar basal-body rod protein [Helicobacter pylori 2017]
          Length = 269

 Score =  126 bits (316), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 52/268 (19%), Positives = 100/268 (37%), Gaps = 26/268 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           MQ  +     A      RL   ++N++N +T GF+       + +   +   +Q      
Sbjct: 1   MQNGYYAATGAMATQFNRLDLTSNNLANLNTNGFKRDDAITGDFLRLYQEYREQLPLEDQ 60

Query: 61  SG-----------------KEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTR 102
           +                  + Y  + +G+F  T   LDFAL   + +FA+++  G+  TR
Sbjct: 61  TKASAKYLNRNLNRVPILSEIYTDRSLGAFEGTNNPLDFALTSPNLYFAIQTNEGVAYTR 120

Query: 103 DGRFKVTDDGSLVSASGKYP---VLDMASVPIQIPQKDEIFNVGEKGEISQKGK---VIA 156
           DG F V  DG LV+ +G              I +    EI      G   +  +      
Sbjct: 121 DGHFSVDKDGFLVTLNGFKVLSRSGLNEKGGIMLMPNAEIEVDQNGGITFRDNEAQIQAG 180

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
            + L S    +   +   +  +        +      +++  LE SN N++ EM  +I +
Sbjct: 181 ALALVSFSEPKNLKKIGQNLYTYQGEGI-HQVSDSGALRQSMLEKSNVNAVREMSALIEI 239

Query: 217 TQKFNSITTLIDE-NEKSMLEAIRNIAS 243
            +  +  + ++    +    EAI  +A+
Sbjct: 240 NRFLDMYSKVLKTHQDDMNAEAINKLAT 267


>gi|268680165|ref|YP_003304596.1| fagellar hook-basal body protein [Sulfurospirillum deleyianum DSM
           6946]
 gi|268618196|gb|ACZ12561.1| fagellar hook-basal body protein [Sulfurospirillum deleyianum DSM
           6946]
          Length = 267

 Score =  126 bits (315), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 60/264 (22%), Positives = 104/264 (39%), Gaps = 21/264 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDID---- 53
           MQ  +     A +    RL+ +++N++N +T  F+   V    F  +    K ++     
Sbjct: 1   MQNGYYDVTGAMVTQFNRLNVISNNLANLNTTAFKRDDVVVGDFKRIFQEYKEEMPLRDN 60

Query: 54  ----------QKISFVASGKEYLSKEVGSFISTGTELDFAL-EGDAWFALESPRGIILTR 102
                              ++Y+  E G   +TG  LDFAL   DA+F +E+P GI LT+
Sbjct: 61  TKEASKFVNAAMSRVPHIVEQYIKYEQGGIKNTGNALDFALKRDDAFFMVETPNGIRLTQ 120

Query: 103 DGRFKVTDDGSLVSASGKYPVLDMA--SVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           +G F + + G L +  G   +      +       +D    V + G +      I  M L
Sbjct: 121 NGSFTLNNVGILTTKEGYPVLPSTYFQNKQYIEVPEDGELRVNQSGALFVGDDEIGQMYL 180

Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
              D  +   +   S  +        +  +G  V +GFLE SN N + EM  +I   +  
Sbjct: 181 VKSDDIKSLTKEGESLYAFKSTDELTQLENGDFVAQGFLETSNINPVSEMVGLIETNRLV 240

Query: 221 NSITTLIDEN-EKSMLEAIRNIAS 243
                ++  +      +AI  +AS
Sbjct: 241 EMYQKVMKSHMNDLNSDAISKLAS 264


>gi|154687758|ref|YP_001422919.1| FlhP [Bacillus amyloliquefaciens FZB42]
 gi|154353609|gb|ABS75688.1| FlhP [Bacillus amyloliquefaciens FZB42]
          Length = 273

 Score =  126 bits (315), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 55/274 (20%), Positives = 104/274 (37%), Gaps = 33/274 (12%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  S      A   L+Q++ TV+ N+SN+DT G++    +FSE++    + ID K     
Sbjct: 1   MLRSMLTASTALHQLQQQMDTVSSNLSNSDTTGYKARDSRFSELIRQQYDHIDDKKENSP 60

Query: 61  SGKEYLS---------------KEVGSFISTGTELDFALEGDA-WFALESPRGIILTRDG 104
           + ++                     GS   T  +LD A      +   E+    + TRDG
Sbjct: 61  NMRKTPPGLRLGAGTVMTPQLDSGQGSIKKTDRDLDIAFTSPYQYLQAEADGRRVYTRDG 120

Query: 105 RFKVTDDGS-----LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK-----V 154
              +   G       +  +G  P+LD    PIQI        + + G ++   +      
Sbjct: 121 SLSLKPAGGNDRLLQLMTAGGNPILDENGQPIQIDSSLTQLKISKTGTLTASDQAGTRSQ 180

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPT------PLEDLSGVTVKRGFLEDSNANSMY 208
              +G+ +V+  Q      ++  S N             +   + +++G LE SN +   
Sbjct: 181 TFNLGIVNVNNPQALHAEGDNLFSVNGAGASAIEELTGANRQAIGMEQGALEGSNVDMSK 240

Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           EM  +I   + +   +  I   ++ +   I ++ 
Sbjct: 241 EMTGLIVSQRSYQLNSRTITLGDQMLG-LINSVR 273


>gi|328913715|gb|AEB65311.1| putative flagellar hook-basal body protein [Bacillus
           amyloliquefaciens LL3]
          Length = 274

 Score =  126 bits (315), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 55/274 (20%), Positives = 104/274 (37%), Gaps = 33/274 (12%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  S      A   L+Q++ TV+ N+SN+DT G++    +FSE++    + ID K     
Sbjct: 2   MLRSMLAASTALNQLQQQMDTVSSNLSNSDTTGYKARDSRFSELIRQQYDQIDDKKENSP 61

Query: 61  SGKEYLS---------------KEVGSFISTGTELDFALEGDA-WFALESPRGIILTRDG 104
           + ++                     GS   T  +LD A      +   E+    + TRDG
Sbjct: 62  NMRKTPPGLRLGAGAMMTPQLDSGQGSIKKTDRDLDIAFTSPYQYLQAEAGGRRVYTRDG 121

Query: 105 RFKVTDDGS-----LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV----- 154
              +   G       +  +G  P+LD    PIQI        + + G ++   +      
Sbjct: 122 SLTLKPAGGNDRLLQLMTAGGNPILDENGQPIQIDSSLTKLKISKTGTLTASDQTGTRSQ 181

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPT------PLEDLSGVTVKRGFLEDSNANSMY 208
              +G+ +V+  Q      ++  S N                 + +++G LE+SN +   
Sbjct: 182 TFNLGIVNVNNPQELHAEGDNLFSVNGTGASAIEELTGAKRQEIGMEQGALENSNVDMSK 241

Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           EM  +I   + +   +  I   ++ +   I ++ 
Sbjct: 242 EMTDLIVSQRSYQLNSRTITLGDQMLG-LINSVR 274


>gi|291486215|dbj|BAI87290.1| flagellar basal-body rod protein [Bacillus subtilis subsp. natto
           BEST195]
          Length = 270

 Score =  126 bits (315), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 48/272 (17%), Positives = 104/272 (38%), Gaps = 34/272 (12%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVV----------GA 47
           M        +A +A ++R   +++N++N +T G++  +     F E++          G 
Sbjct: 1   MLKGLYTATSAMIAQQRRTEMLSNNIANANTSGYKADQGSMRAFPEMLLSRIESKSPAGT 60

Query: 48  IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA-------------WFALES 94
            + +I    + V   +       GS  ST   +D AL  +              ++ +++
Sbjct: 61  SRTEIGSVNTGVYMQELKPLFTQGSLKSTDQPIDIALIENQVPMNAETNENAALFYPVQT 120

Query: 95  PRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV 154
             GI  ++   F + ++ + ++ +G+  +         I   +E F V E G ++  G+ 
Sbjct: 121 ADGIRYSKSSTFSLNEN-NQLTINGRPVLSTDRQP---ITVDNENFTVSENGTVTTNGRT 176

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNI----PPTPLEDLSGVTVKRGFLEDSNANSMYEM 210
              + +   +  +   R  N   S       P     +    ++K+G  E SN +     
Sbjct: 177 AGQIDVRMAEDVRNLKRDGNDLYSTADGNDLPSAAGNNQVSYSLKQGVSELSNVDVTSAY 236

Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            +M    + F +   +I   +KSM +A   I 
Sbjct: 237 TEMTEAYRSFEANQKVIQAYDKSMDKAANEIG 268


>gi|170680219|ref|YP_001742374.1| flagellar basal body rod protein FlgF [Escherichia coli SMS-3-5]
 gi|170517937|gb|ACB16115.1| lateral flagellar rod protein LfgF [Escherichia coli SMS-3-5]
          Length = 245

 Score =  126 bits (315), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 47/237 (19%), Positives = 84/237 (35%), Gaps = 7/237 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       L+            A+N++N +T GFR            +K           
Sbjct: 1   MDRLIYTALSGASQTLYEQQISANNLANVNTNGFRADMAM--ATNDKVKGGGFDTRYMAQ 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119
            G   ++   G    T   LD A++G  + A  +     + TR+G  +  D G  ++  G
Sbjct: 59  EGASGVNDSTGVAEKTERPLDVAIQGAGYIAVQDKNGNEVYTRNGNIQQDDQG-QLTIDG 117

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176
              + D   + +         + G        G V ATM +     VD+    + +   G
Sbjct: 118 NLVLGDNGPIILPPNAIASFGSDGTLSVTPDDGDVTATMDIDRLKLVDIPVANLAKNPEG 177

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           +       P +    + V  GFLE SN +++ EM   I + ++F +   ++   E  
Sbjct: 178 MLVTSDGIPAQRDENIKVSGGFLEGSNVSAVSEMMSSIAMNRQFEAQIKMMKTAEDI 234


>gi|317008999|gb|ADU79579.1| flagellar basal-body rod protein [Helicobacter pylori India7]
          Length = 269

 Score =  126 bits (315), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 53/267 (19%), Positives = 97/267 (36%), Gaps = 26/267 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDID---- 53
           MQ  +     A      RL   ++N++N +T GF+        F  +    +  +     
Sbjct: 1   MQNGYYAATGAMATQFNRLDLTSNNLANLNTNGFKRDDAITGDFLRLYQQYREQLPLEDQ 60

Query: 54  ----------QKISFVASGKEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTR 102
                              + Y  + +G+F  T   LDFAL   + +FA+++  G+  TR
Sbjct: 61  TKASAKYLNRNLNRVPILSEIYTDRSLGAFEGTHNPLDFALTSPNLYFAIQTNEGVAYTR 120

Query: 103 DGRFKVTDDGSLVSASGKYP---VLDMASVPIQIPQKDEIFNVGEKGEISQKGK---VIA 156
           DG F V  DG LV+ +G              I +    EI      G   +  +      
Sbjct: 121 DGHFSVDKDGFLVTLNGFRVLSRSGLNEKGGIMLMPDAEIEVNQNGGITFRDNEAQIQAG 180

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
            + L S    +   +   +  +        +      +K+  LE SN N++ EM  +I +
Sbjct: 181 ALALVSFSEPKNLKKIGQNLYTYQGEGV-HQVSDSGALKQYMLEKSNVNAVREMSALIEI 239

Query: 217 TQKFNSITTLIDE-NEKSMLEAIRNIA 242
            +  +  + ++    +    EAI  +A
Sbjct: 240 NRFLDMYSKVLKTHQDDMNAEAINKLA 266


>gi|308184156|ref|YP_003928289.1| flagellar basal-body rod protein [Helicobacter pylori SJM180]
 gi|308060076|gb|ADO01972.1| flagellar basal-body rod protein [Helicobacter pylori SJM180]
          Length = 269

 Score =  126 bits (315), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 56/268 (20%), Positives = 102/268 (38%), Gaps = 26/268 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDIDQKIS 57
           MQ  +     A      RL   ++N++N +T GF+        F  +    +  +  +  
Sbjct: 1   MQNGYYAATGAMATQFNRLDLTSNNLANLNTNGFKRDDAITGDFLRLYQQYREQLPLENQ 60

Query: 58  FVASGKE--------------YLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTR 102
             AS K               Y  + +G+F  T   LDFAL   + +FA+++  G+  TR
Sbjct: 61  TKASAKYLNRNLNRVPILSEIYTDRSLGTFEGTHNPLDFALTSPNIYFAIQTNEGVAYTR 120

Query: 103 DGRFKVTDDGSLVSASGKYP---VLDMASVPIQIPQKDEIFNVGEKGEISQKGK---VIA 156
           DG F V  DG LV+ +G              I +    EI      G   +  +      
Sbjct: 121 DGHFSVDKDGFLVTLNGFKVLSRSGLNEKGGIMLMPNAEIEVDQNGGITFRDNEAQIQAG 180

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
            + L S    +   ++    +      +  +      +K+  LE SN N++ EM  +I +
Sbjct: 181 ALALVSFSEPKNL-KKIGQNLYTYQGESVHQVSDSGALKQYMLEKSNVNAVREMSALIEI 239

Query: 217 TQKFNSITTLIDE-NEKSMLEAIRNIAS 243
            +  +  + ++    +    EAI  +A+
Sbjct: 240 NRFLDMYSKVLKTHQDDMNAEAINKLAT 267


>gi|332296517|ref|YP_004438440.1| flagellar hook-basal body protein [Thermodesulfobium narugense DSM
           14796]
 gi|332179620|gb|AEE15309.1| flagellar hook-basal body protein [Thermodesulfobium narugense DSM
           14796]
          Length = 251

 Score =  126 bits (315), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 55/254 (21%), Positives = 101/254 (39%), Gaps = 20/254 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE--------VVGAIKND- 51
           M           + L  +L +V +N++N  T GF+ I    SE        V        
Sbjct: 1   MVRGIEAAAKGMITLSDKLDSVTNNLANISTPGFKRIIQNVSESENYPVNRVFLQSDGGR 60

Query: 52  ---IDQKISFVASGKEYLSKEVGSFISTGTELDFAL--EGDAWFALESPRGIILTRDGRF 106
              +    +      + +    G    T ++ D A+    +A+F +++P GI  TRDG F
Sbjct: 61  APFMGYLGNGSEISTQAVDLSAGGLEHTSSKFDVAITLNNNAFFQVQTPNGIRYTRDGNF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
            + ++  LV+  G   +    +    I    +   +   G I   G+   T+G+ S+D  
Sbjct: 121 TLNNNDELVTQDGYPVLSSANAP---ITIDGQNVVISSDGSIQVDGQQTDTLGIVSLDNP 177

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
              V + ++  + N     + + S   V +G+LE SN N++ EM  MI L + + S    
Sbjct: 178 SLIVPQGSNLYNYNG---QVVNASNFKVLQGYLESSNVNTVREMVDMIALERAYESGQKA 234

Query: 227 IDENEKSMLEAIRN 240
           I   +    + +  
Sbjct: 235 IVTEDNETGQMLSQ 248


>gi|331645419|ref|ZP_08346523.1| putative flagella basal body rod protein [Escherichia coli M605]
 gi|323975929|gb|EGB71023.1| fagellar hook-basal body protein [Escherichia coli TW10509]
 gi|331045581|gb|EGI17707.1| putative flagella basal body rod protein [Escherichia coli M605]
          Length = 245

 Score =  126 bits (315), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 47/237 (19%), Positives = 84/237 (35%), Gaps = 7/237 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       L+            A+N++N +T GFR            +K           
Sbjct: 1   MDRLIYTALSGASQTLYEQQISANNLANVNTNGFRADMAM--ATNDKVKGGGFDTRYMAQ 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119
            G   ++   G    T   LD A++G  + A  +     + TR+G  +  D G  ++  G
Sbjct: 59  EGASGVNDSTGVAEKTERPLDVAIQGAGYIAVQDKNGNEVYTRNGNIQQDDQG-QLTIDG 117

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176
              + D   + +         + G        G V ATM +     VD+    + +   G
Sbjct: 118 NLVLGDNGPIILPPNAIASFGSDGTLSVTPDDGDVTATMDIDRLKLVDIPVANLAKNPEG 177

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           +       P +    + V  GFLE SN +++ EM   I + ++F +   ++   E  
Sbjct: 178 MLVTSDGVPAQRDENIKVSGGFLEGSNVSAVSEMMSSIAMNRQFEAQIKMMKTAEDI 234


>gi|152990358|ref|YP_001356080.1| flagellar basal-body rod protein FlgF [Nitratiruptor sp. SB155-2]
 gi|151422219|dbj|BAF69723.1| flagellar basal-body rod protein FlgF [Nitratiruptor sp. SB155-2]
          Length = 238

 Score =  126 bits (315), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 57/242 (23%), Positives = 100/242 (41%), Gaps = 11/242 (4%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV-KFSEVVGAIKNDIDQKISFVA 60
             +  +  +      ++L TV +N++N +T GF+ + V + S+ +     D +    F  
Sbjct: 5   LQATYVLASGASRAMEQLDTVTNNLANVNTTGFKEMVVKEMSQRLDENGGDSNHLFVFPR 64

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
             +  L+   G    T   LDFALEG  +F ++      LTR+G F + ++G LV  +G 
Sbjct: 65  FKESILNFAQGPLKHTQNRLDFALEGKGFFIVQKGDQKFLTRNGHFLINNEGLLVDQNGH 124

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
           Y +           +     NV E G I Q G  +  + + + D                
Sbjct: 125 YLLDTADKPVRL--EGKSEINVTEDGSIYQNGAFVTKLQIKNYDN-------VTIIGDTY 175

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
             P   E      V++G+LE SN N + EM +MI   ++F+    +I   ++   +    
Sbjct: 176 YEPQGNELTVDAKVRQGYLESSNINPLMEMTEMIMAQRRFDMYGNMIKSMDQLNQKT-NE 234

Query: 241 IA 242
           I 
Sbjct: 235 IG 236


>gi|15611401|ref|NP_223052.1| flagellar basal-body rod protein [Helicobacter pylori J99]
 gi|4154843|gb|AAD05896.1| FLAGELLAR BASAL-BODY ROD PROTEIN [Helicobacter pylori J99]
          Length = 269

 Score =  126 bits (315), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 52/268 (19%), Positives = 100/268 (37%), Gaps = 26/268 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           MQ  +     A      RL   ++N++N +T GF+       + +   +   +Q      
Sbjct: 1   MQNGYYAATGAMATQFNRLDLTSNNLANLNTNGFKRDDAITGDFLRLYQEYREQLPLEDQ 60

Query: 61  SG-----------------KEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTR 102
           +                  + Y  + +G+F  T   LDFAL   + +FA+++  G+  TR
Sbjct: 61  TKASAKYLNRNLNRVPILSEIYTDRSLGAFEGTNNPLDFALTSPNLYFAIQTNEGVAYTR 120

Query: 103 DGRFKVTDDGSLVSASGKYP---VLDMASVPIQIPQKDEIFNVGEKGEISQKGK---VIA 156
           DG F V  DG LV+ +G              I +    EI      G   +  +      
Sbjct: 121 DGHFSVDKDGFLVTLNGFKVLSRSGLNEKGGIMLMPNAEIEVDQNGGITFRDNEAQIQAG 180

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
            + L S    +   +   +  +        +      +++  LE SN N++ EM  +I +
Sbjct: 181 ALALVSFSEPKNLKKIGQNLYTYQGEGV-HQVSDSGALRQSMLEKSNVNAVREMSTLIEI 239

Query: 217 TQKFNSITTLIDE-NEKSMLEAIRNIAS 243
            +  +  + ++    +    EAI  +A+
Sbjct: 240 NRFLDMYSKVLKTHQDDMNAEAINKLAT 267


>gi|300817269|ref|ZP_07097487.1| flagellar basal body rod protein FlgF [Escherichia coli MS 107-1]
 gi|307313518|ref|ZP_07593139.1| fagellar hook-basal body protein [Escherichia coli W]
 gi|300530245|gb|EFK51307.1| flagellar basal body rod protein FlgF [Escherichia coli MS 107-1]
 gi|306906686|gb|EFN37197.1| fagellar hook-basal body protein [Escherichia coli W]
 gi|315059543|gb|ADT73870.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli W]
 gi|323379898|gb|ADX52166.1| fagellar hook-basal body protein [Escherichia coli KO11]
          Length = 245

 Score =  126 bits (315), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 47/237 (19%), Positives = 84/237 (35%), Gaps = 7/237 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       L+            A+N++N +T GFR            +K           
Sbjct: 1   MDRLIYTALSGASQTLYEQQISANNLANVNTNGFRADMAM--ATNNKVKGGGFDTRYMAQ 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119
            G   ++   G    T   LD A++G  + A  +     + TR+G  +  D G  ++  G
Sbjct: 59  EGASGVNDSTGVAEKTERPLDVAIQGAGYIAVQDKNGNEVYTRNGNIQQDDQG-QLTIDG 117

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176
              + D   + +         + G        G V ATM +     VD+    + +   G
Sbjct: 118 NLVLGDNGPIILPPNAIASFGSDGTLSVTPDDGDVTATMDIDRLKLVDIPVANLAKNPEG 177

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           +       P +    + V  GFLE SN +++ EM   I + ++F +   ++   E  
Sbjct: 178 MLVTADGVPAQRDENIKVSGGFLEGSNVSAVSEMMSSIAMNRQFEAQIKMMKTAEDI 234


>gi|254255088|ref|ZP_04948405.1| Flagellar basal body rod protein [Burkholderia dolosa AUO158]
 gi|124899733|gb|EAY71576.1| Flagellar basal body rod protein [Burkholderia dolosa AUO158]
          Length = 241

 Score =  126 bits (315), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 46/237 (19%), Positives = 85/237 (35%), Gaps = 4/237 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M+      +      ++ L   A+N++N  T GFR   V+   +                
Sbjct: 1   MEAFIYTAMTGAAYAQRALGVRANNLANAQTAGFRADLVRAESL--TPDGVGYDSRHLAH 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
                +    G    TG  LD A+ G  +  +E+  G   TR G   +  DG  ++ +G+
Sbjct: 59  LVSTDVDVAPGPMSETGRSLDVAIAGAGYLTVETDDGPAYTRAGHLSIDGDG-ALTVNGR 117

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ-GFVRRENSGISP 179
             + D   + +   +   I   G    +      + T+    +       + +   G+  
Sbjct: 118 PVLGDGGPIVLPAHRSATIGGDGTISVVPSGESEVQTVARLLLVNPDPADLVKNPEGLLV 177

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           +      +    VTVK G LE SN +++ EM Q + LT+ F     L    ++    
Sbjct: 178 SRSGAEYDADETVTVKGGHLEGSNISAIEEMMQTLSLTRSFEMQMRLYRAADEMADT 234


>gi|261837791|gb|ACX97557.1| flagellar basal-body rod protein [Helicobacter pylori 51]
          Length = 269

 Score =  126 bits (315), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 51/268 (19%), Positives = 98/268 (36%), Gaps = 26/268 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDID---- 53
           MQ  +     A      RL   ++N++N +T GF+        F  +    +  +     
Sbjct: 1   MQNGYYAATGAMATQFNRLDLTSNNLANLNTNGFKRDDAITGDFLRLYQQYREQLPLEDQ 60

Query: 54  ----------QKISFVASGKEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTR 102
                              + Y  + +G+F  T   LDFAL   + +FA+++  GI  TR
Sbjct: 61  TKASAKYLNRNLNRVPILSEIYTDRSLGAFEETHNPLDFALTSPNLYFAIQTNEGIAYTR 120

Query: 103 DGRFKVTDDGSLVSASGKYP------VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156
           DG F V  DG LV+ +G               + +   + +   N       ++      
Sbjct: 121 DGHFSVDKDGFLVTLNGFRVLSRSGLNEKGGIMLMPNAEIEVNQNGEITFRDNEAPIQAG 180

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
            + L S    +   +   +  +        +      +++  LE SN N++ EM  +I +
Sbjct: 181 ALALVSFSEPKNLKKIGQNLYTYQGEGV-HQISDSGALRQYMLEKSNVNAVREMSTLIGI 239

Query: 217 TQKFNSITTLIDE-NEKSMLEAIRNIAS 243
            +  +  + ++    +    EAI  +AS
Sbjct: 240 NRFLDMYSKVLKTHQDDMNAEAINKLAS 267


>gi|183598618|ref|ZP_02960111.1| hypothetical protein PROSTU_02018 [Providencia stuartii ATCC 25827]
 gi|188020797|gb|EDU58837.1| hypothetical protein PROSTU_02018 [Providencia stuartii ATCC 25827]
          Length = 251

 Score =  126 bits (315), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 87/251 (34%), Gaps = 11/251 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       +       +  + V++N++N  T GF+        V   I  D +Q  + V 
Sbjct: 1   MDHVIYTAMGGARHALENQAIVSNNIANVSTSGFKAQLAAMRAV--PIHGDSEQTRTLVV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASG 119
           +         G    TG  +D AL    + A+E +      TR+G  +++ DG LV    
Sbjct: 59  ASTPGADMSQGPLNYTGRPMDVALNDKHFLAVELADGSEAYTRNGNIQISPDGELVIGER 118

Query: 120 K-YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV--DMSQGFVRRENSG 176
           +        +VP                  +    ++  +G   V     Q  +R E+  
Sbjct: 119 RLQGDGGPINVPPNAELTIGEDGTVTALLATDPPTMLGQIGRLKVVEAQPQDLIRGEDGL 178

Query: 177 I-----SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
                 +       L      +V  G +E SN N+   M  MI   + F     ++   +
Sbjct: 179 FHLSPQAAAANGNGLAQSERASVTSGVIEGSNVNAAEAMVSMIANARYFEMQMKVVRSAD 238

Query: 232 KSMLEAIRNIA 242
           ++  +A + +A
Sbjct: 239 ENAQKANQLLA 249


>gi|218703526|ref|YP_002411045.1| flagellar basal body rod protein FlgF [Escherichia coli UMN026]
 gi|293403356|ref|ZP_06647447.1| conserved hypothetical protein [Escherichia coli FVEC1412]
 gi|298378967|ref|ZP_06988848.1| flagellar basal-body rod protein FlgF [Escherichia coli FVEC1302]
 gi|300900358|ref|ZP_07118534.1| flagellar basal body rod protein FlgF [Escherichia coli MS 198-1]
 gi|300936127|ref|ZP_07151066.1| flagellar basal body rod protein FlgF [Escherichia coli MS 21-1]
 gi|218430623|emb|CAR11489.1| Lateral flagellar rod protein (FlgF-like) [Escherichia coli UMN026]
 gi|291429209|gb|EFF02229.1| conserved hypothetical protein [Escherichia coli FVEC1412]
 gi|298280080|gb|EFI21584.1| flagellar basal-body rod protein FlgF [Escherichia coli FVEC1302]
 gi|300356126|gb|EFJ71996.1| flagellar basal body rod protein FlgF [Escherichia coli MS 198-1]
 gi|300458705|gb|EFK22198.1| flagellar basal body rod protein FlgF [Escherichia coli MS 21-1]
 gi|323171065|gb|EFZ56714.1| flagellar basal-body rod protein FlgF [Escherichia coli LT-68]
 gi|323191539|gb|EFZ76800.1| flagellar basal-body rod protein FlgF [Escherichia coli RN587/1]
          Length = 245

 Score =  126 bits (315), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 47/237 (19%), Positives = 84/237 (35%), Gaps = 7/237 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       L+            A+N++N +T GFR            +K           
Sbjct: 1   MDRLIYTALSGASQTLYEQQISANNLANVNTNGFRADMAM--ATNDKVKGGGFDTRYMAQ 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119
            G   ++   G    T   LD A++G  + A  +     + TR+G  +  D G  ++  G
Sbjct: 59  EGASGVNDSTGVAEKTERPLDVAIQGAGYIAVQDKNGNEVYTRNGNIQQDDQG-QLTIDG 117

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176
              + D   + +         + G        G V ATM +     VD+    + +   G
Sbjct: 118 NLVLGDNGPIILPPNAIASFGSDGTLSVTPDDGDVTATMDIDRLKLVDIPVANLAKNPEG 177

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           +       P +    + V  GFLE SN +++ EM   I + ++F +   ++   E  
Sbjct: 178 MLITADGVPAQRDENIKVSGGFLEGSNVSAVSEMMSSIAMNRQFEAQIKMMKTAEDI 234


>gi|239815248|ref|YP_002944158.1| hypothetical protein Vapar_2263 [Variovorax paradoxus S110]
 gi|239801825|gb|ACS18892.1| conserved hypothetical protein [Variovorax paradoxus S110]
          Length = 259

 Score =  125 bits (314), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 52/257 (20%), Positives = 96/257 (37%), Gaps = 16/257 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK--------FSEVV----GAI 48
           M     I L +      RL  ++ NM+N  T G++             FS+ +     + 
Sbjct: 1   MSDVLAISLNSMQQDMARLERISMNMANATTPGYKREVASSLQVGAGAFSDALREARAST 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                       +         GS  STG  LD AL    +F + +  G+  TR G +++
Sbjct: 61  LAGRAAGSPAAGTLLVQTDARPGSLKSTGQSLDVALTAAGFFEVSTDAGLAYTRQGSWQL 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG---KVIATMGLYSVDM 165
              G LV+A G   +     + +  P      +          G     +  + +   + 
Sbjct: 121 DARGRLVTAQGHPVMGVGGEIVLSRPNPVIDASGQVFESKPGGGAESTPVGQLKVVRFEN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225
           +  F R    G+            + V +++GF+E+SN +SM EM Q+I   + F S+  
Sbjct: 181 TDDFQR-MGGGLMRTEQQPAQVAEADVQLRQGFVENSNVSSMQEMAQLIQSMRHFESMQR 239

Query: 226 LIDENEKSMLEAIRNIA 242
           +    ++ +  A+R + 
Sbjct: 240 VALGYDEMIGGAVRKLG 256


>gi|149194279|ref|ZP_01871376.1| flagellar basal-body rod protein [Caminibacter mediatlanticus TB-2]
 gi|149135454|gb|EDM23933.1| flagellar basal-body rod protein [Caminibacter mediatlanticus TB-2]
          Length = 262

 Score =  125 bits (314), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 57/261 (21%), Positives = 117/261 (44%), Gaps = 22/261 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDID---- 53
           M   F     A +    RL+ +++N++N +T GF+   +    F  +    ++ +     
Sbjct: 1   MINGFYDTTGAMVTQFNRLNQISNNLANVNTNGFKQDSLIIGTFERLFKQTRDKLPLENN 60

Query: 54  ----------QKISFVASGKEYLSKEVGSFISTGTELDFALEG-DAWFALESPRGIILTR 102
                              +EY +  +G+ I T   LD AL+  +++F L++P G  +TR
Sbjct: 61  TKEAAKFLNRNLNKVPQIVEEYTNFSLGNMIKTSNPLDIALKNKNSFFVLDTPSGDKITR 120

Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162
           DG F + ++G LV+  G    LD+   PI++P+  +   +     I   G+ + T+ + S
Sbjct: 121 DGAFSLDENGFLVNKKGFKV-LDINDKPIKLPKNTKNITIDNDANIYINGEKLTTLKIVS 179

Query: 163 VDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222
           +D  +  +++  + +   +P + +      T+ +GF+E SN N + EM  +I   +    
Sbjct: 180 IDNLKD-IKKVGNNMWDFVPGSEIISTKNTTI-QGFIEKSNVNVIKEMTDLIETNRLVEQ 237

Query: 223 ITTLIDE-NEKSMLEAIRNIA 242
              ++    +    +AI  +A
Sbjct: 238 YQKVMTTFMDDLNKDAIEKLA 258


>gi|308061706|gb|ADO03594.1| flagellar basal-body rod protein [Helicobacter pylori Cuz20]
          Length = 269

 Score =  125 bits (314), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 50/268 (18%), Positives = 99/268 (36%), Gaps = 26/268 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDID---- 53
           MQ  +     A      RL   ++N++N +T GF+        F  +    +  +     
Sbjct: 1   MQNGYYAATGAMATQFNRLDLTSNNLANLNTDGFKRDDAITGDFLRLYQQYREQLPLEDQ 60

Query: 54  ----------QKISFVASGKEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTR 102
                              + Y  + +G+F  T   LDFAL   + +FA+++  G+  TR
Sbjct: 61  TKASAKYLNRNLNRVPILSEIYTDRSLGAFEETHNPLDFALTSPNLYFAIQTNEGVAYTR 120

Query: 103 DGRFKVTDDGSLVSASGKYP------VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156
           DG F V  DG LV+ +G               + +   + +   N       ++      
Sbjct: 121 DGHFSVDKDGFLVTLNGFRVLSRSGLNEKGGIMLMPNAEIEVNQNGEITFRDNEAPIQAG 180

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
            + L S    +   +   +  +        +     ++++  LE SN N++ EM  +I +
Sbjct: 181 ALALVSFSEPKNLKKIGQNLYTYQGEGV-HQISDSGSLRQYMLEKSNVNAVREMSALIGI 239

Query: 217 TQKFNSITTLIDE-NEKSMLEAIRNIAS 243
            +  +  + ++    +    EAI  +AS
Sbjct: 240 NRFLDMYSKVLKTHQDDMNAEAINKLAS 267


>gi|39936960|ref|NP_949236.1| flagellar basal body rod protein FlgF [Rhodopseudomonas palustris
           CGA009]
 gi|192292788|ref|YP_001993393.1| flagellar basal body rod protein FlgF [Rhodopseudomonas palustris
           TIE-1]
 gi|39650817|emb|CAE29340.1| putative flagellar basal-body rod protein flgF [Rhodopseudomonas
           palustris CGA009]
 gi|192286537|gb|ACF02918.1| flagellar basal body rod protein [Rhodopseudomonas palustris TIE-1]
          Length = 253

 Score =  125 bits (314), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 59/251 (23%), Positives = 121/251 (48%), Gaps = 11/251 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND-----IDQK 55
           M+ +  +GL+ Q+ LE+++  VA+N++N +T GF+  +  F E +    ++      D++
Sbjct: 1   MENALLVGLSRQVVLERQMDVVANNLANLNTNGFKAERSVFQEFLNTGAHEDNFARPDRR 60

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115
           +SFV     Y     G+   T   LD A++G  +  +++P+G   TRDG   +   G LV
Sbjct: 61  VSFVQDRATYHDLSTGALQETKNPLDVAIDGKGFLVVQTPQGERFTRDGSLTINAQGQLV 120

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI----ATMGLYSVDMSQGFVR 171
           + SG   +     + IQ   K+   +   +  + +   +I      + + + D  Q  ++
Sbjct: 121 NGSGFPVLGTGGPIVIQPTDKELSISPDGRVSVVEGTSIIDSLRGKLRVVTFDRPQSLIK 180

Query: 172 RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
           +  +  +           +   V++G++E SN NS+ EM +MI +T+ +  I+ ++ +  
Sbjct: 181 QGGNLFAATSD--QGTPDTKSMVRQGYVEKSNVNSVLEMTRMIDVTRTYTQISAMLQQES 238

Query: 232 KSMLEAIRNIA 242
           +    AI  +A
Sbjct: 239 ELRKTAIEKLA 249


>gi|261839205|gb|ACX98970.1| flagellar basal-body rod protein FlgG [Helicobacter pylori 52]
          Length = 269

 Score =  125 bits (314), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 50/268 (18%), Positives = 98/268 (36%), Gaps = 26/268 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDID---- 53
           MQ  +     A      RL   ++N++N +T GF+        F  +    +  +     
Sbjct: 1   MQNGYYAATGAMATQFNRLDLTSNNLANLNTNGFKRDDAITGDFLRLYQQYREQLPLEDQ 60

Query: 54  ----------QKISFVASGKEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTR 102
                              + Y  + +G+F  T   LDFAL   + +FA+++  G+  TR
Sbjct: 61  TKASAKYLNRNLNRVPILSEIYTDRSLGAFEETHNPLDFALTSPNLYFAIQTNEGVAYTR 120

Query: 103 DGRFKVTDDGSLVSASGKYP------VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156
           DG F V  DG LV+ +G               + +   + +   N       ++      
Sbjct: 121 DGHFSVDKDGFLVTLNGFRVLSRSGLNEKGGIMLMPNAEIEVNQNGEITFRDNEAPIQAG 180

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
            + L S    +   +   +  +        +      +++  LE SN N++ EM  +I +
Sbjct: 181 ALALVSFSEPKNLKKIGQNLYTYQGEGV-HQISDSGALRQYMLEKSNVNAVREMSALIGI 239

Query: 217 TQKFNSITTLIDE-NEKSMLEAIRNIAS 243
            +  +  + ++    +    EAI  +AS
Sbjct: 240 NRFLDMYSKVLKTHQDDMNAEAINKLAS 267


>gi|308182526|ref|YP_003926653.1| flagellar basal-body rod protein [Helicobacter pylori PeCan4]
 gi|308064711|gb|ADO06603.1| flagellar basal-body rod protein [Helicobacter pylori PeCan4]
          Length = 269

 Score =  125 bits (314), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 52/268 (19%), Positives = 98/268 (36%), Gaps = 26/268 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDID---- 53
           MQ  +     A      RL   ++N++N +T GF+        F  +    +  +     
Sbjct: 1   MQNGYYAATGAMATQFNRLDLTSNNLANLNTNGFKRDDAITGDFLRLYQQYREQLPLEDQ 60

Query: 54  ----------QKISFVASGKEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTR 102
                              + Y  + +G+F  T   LDFAL   + +FA+++  G+  TR
Sbjct: 61  TKASAKYLNRNLNRVPILSEIYTDRSLGAFEETHNPLDFALTSPNLYFAIQTNEGVAYTR 120

Query: 103 DGRFKVTDDGSLVSASGKYP---VLDMASVPIQIPQKDEIFNVGEKGEISQKGK---VIA 156
           DG F V  DG LV+ +G              I +    EI      G   +  +      
Sbjct: 121 DGHFSVDKDGFLVTLNGFRVLSRSGLNEKGGIMLMPDAEIEVDQNGGITFRDNEAQIQAG 180

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
            + L S    +   +   +  +        +      +++  LE SN N++ EM  +I +
Sbjct: 181 ALALVSFSEPKNLKKIGQNLYTYQGEGV-HQISDSGALRQYMLEKSNVNAVREMSALIGI 239

Query: 217 TQKFNSITTLIDE-NEKSMLEAIRNIAS 243
            +  +  + ++    +    EAI  +A+
Sbjct: 240 NRFLDMYSKVLKTHQDDMNAEAINKLAT 267


>gi|188495566|ref|ZP_03002836.1| flagellar basal-body rod protein FlgF [Escherichia coli 53638]
 gi|188490765|gb|EDU65868.1| flagellar basal-body rod protein FlgF [Escherichia coli 53638]
          Length = 245

 Score =  125 bits (314), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 47/237 (19%), Positives = 84/237 (35%), Gaps = 7/237 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       L+            A+N++N +T GFR            +K           
Sbjct: 1   MDRLIYTALSGASQTLYEQQISANNLANVNTNGFRADMAM--ATNDKVKGSGFDTRYMAQ 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119
            G   ++   G    T   LD A++G  + A  +     + TR+G  +  D G  ++  G
Sbjct: 59  EGASGVNDSTGVAEKTERPLDVAIQGAGYIAVQDKNGNEVYTRNGNIQQDDQG-QLTIDG 117

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176
              + D   + +         + G        G V ATM +     VD+    + +   G
Sbjct: 118 NLVLGDNGPIILPPNAIASFGSDGTLSVTPDDGDVTATMDIDRLKLVDIPVANLAKNPEG 177

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           +       P +    + V  GFLE SN +++ EM   I + ++F +   ++   E  
Sbjct: 178 MLVTADGVPAQRDENIKVSGGFLEGSNVSAVSEMMSSIAMNRQFEAQIKMMKTAEDI 234


>gi|254499120|ref|ZP_05111810.1| flagellar basal body rod protein [Legionella drancourtii LLAP12]
 gi|254351659|gb|EET10504.1| flagellar basal body rod protein [Legionella drancourtii LLAP12]
          Length = 258

 Score =  125 bits (314), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 32/258 (12%), Positives = 83/258 (32%), Gaps = 17/258 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--------- 51
           M  +  I  +   A E  +  +A++++N +T  ++  K+ F +V+    +          
Sbjct: 1   MSNALAIAASGLKAEEYHIDRIANDLANLNTANYKATKLTFEDVLYQNIHGEESLFNNQP 60

Query: 52  IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTD 110
             +     A  K       G   ++    D A+ G  ++  + +   I  TR+    V  
Sbjct: 61  SAKLGLGTALYKSSKDFTDGPLKASNNWNDVAINGSGFYQVINTDGSIAYTRNSALSVDA 120

Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDMSQGF 169
           D  L +  G     ++                 E       + +++ T+ L      +  
Sbjct: 121 DHYLATQEGLRLADNIQIPEDFTQLTIHTNGNVEVTLVDEPEPQLLGTIQLAKFINPETL 180

Query: 170 VRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224
               +   +     +     +       T+ +  +E SN + +  + Q+    + +    
Sbjct: 181 NPVGSGTYTLTDESSEPLIDNPGSSGLGTLAQYQVEGSNVDMVSSLMQLTMAQRVYQLNA 240

Query: 225 TLIDENEKSMLEAIRNIA 242
             +   ++ + +    I 
Sbjct: 241 KAVQIADE-LEKLTNEIR 257


>gi|22126388|ref|NP_669811.1| flagellar basal-body rod protein FlgG [Yersinia pestis KIM 10]
 gi|45441407|ref|NP_992946.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Microtus str. 91001]
 gi|108807175|ref|YP_651091.1| flagellar basal-body rod protein FlgG [Yersinia pestis Antiqua]
 gi|108812481|ref|YP_648248.1| flagellar basal-body rod protein FlgG [Yersinia pestis Nepal516]
 gi|145598608|ref|YP_001162684.1| flagellar basal-body rod protein FlgG [Yersinia pestis Pestoides F]
 gi|149366249|ref|ZP_01888284.1| flagellar basal-body rod protein FlgG [Yersinia pestis CA88-4125]
 gi|162420398|ref|YP_001606475.1| flagellar basal-body rod protein FlgG [Yersinia pestis Angola]
 gi|165925935|ref|ZP_02221767.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165938754|ref|ZP_02227309.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166010911|ref|ZP_02231809.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166210683|ref|ZP_02236718.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167401156|ref|ZP_02306659.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167419985|ref|ZP_02311738.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167425757|ref|ZP_02317510.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167467493|ref|ZP_02332197.1| flagellar basal-body rod protein FlgG [Yersinia pestis FV-1]
 gi|218928924|ref|YP_002346799.1| flagellar basal-body rod protein FlgG [Yersinia pestis CO92]
 gi|229896244|ref|ZP_04511414.1| Flagellar basal-body rod protein flgG [Yersinia pestis Pestoides A]
 gi|229897179|ref|ZP_04512335.1| Flagellar basal-body rod protein flgG [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229897905|ref|ZP_04513056.1| Flagellar basal-body rod protein flgG [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229902863|ref|ZP_04517980.1| Flagellar basal-body rod protein flgG [Yersinia pestis Nepal516]
 gi|270486643|ref|ZP_06203717.1| flagellar basal-body rod protein FlgG [Yersinia pestis KIM D27]
 gi|294504028|ref|YP_003568090.1| flagellar basal-body rod protein FlgG [Yersinia pestis Z176003]
 gi|21959374|gb|AAM86062.1|AE013853_10 cell-distal portion of basal-body rod [Yersinia pestis KIM 10]
 gi|45436267|gb|AAS61823.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Microtus str. 91001]
 gi|108776129|gb|ABG18648.1| flagellar basal-body rod protein FlgG [Yersinia pestis Nepal516]
 gi|108779088|gb|ABG13146.1| flagellar basal-body rod protein FlgG [Yersinia pestis Antiqua]
 gi|115347535|emb|CAL20444.1| flagellar basal-body rod protein FlgG [Yersinia pestis CO92]
 gi|145210304|gb|ABP39711.1| flagellar basal-body rod protein FlgG [Yersinia pestis Pestoides F]
 gi|149292662|gb|EDM42736.1| flagellar basal-body rod protein FlgG [Yersinia pestis CA88-4125]
 gi|162353213|gb|ABX87161.1| flagellar basal-body rod protein FlgG [Yersinia pestis Angola]
 gi|165913368|gb|EDR31990.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165922139|gb|EDR39316.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165990255|gb|EDR42556.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166207863|gb|EDR52343.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|166961680|gb|EDR57701.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167049545|gb|EDR60953.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167055156|gb|EDR64953.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|229680310|gb|EEO76409.1| Flagellar basal-body rod protein flgG [Yersinia pestis Nepal516]
 gi|229688946|gb|EEO81011.1| Flagellar basal-body rod protein flgG [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229693516|gb|EEO83565.1| Flagellar basal-body rod protein flgG [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229701167|gb|EEO89196.1| Flagellar basal-body rod protein flgG [Yersinia pestis Pestoides A]
 gi|262361786|gb|ACY58507.1| flagellar basal-body rod protein FlgG [Yersinia pestis D106004]
 gi|262366078|gb|ACY62635.1| flagellar basal-body rod protein FlgG [Yersinia pestis D182038]
 gi|270335147|gb|EFA45924.1| flagellar basal-body rod protein FlgG [Yersinia pestis KIM D27]
 gi|294354487|gb|ADE64828.1| flagellar basal-body rod protein FlgG [Yersinia pestis Z176003]
 gi|320015465|gb|ADV99036.1| Flagellar basal-body rod protein flgG [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 232

 Score =  125 bits (314), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 37/231 (16%), Positives = 78/231 (33%), Gaps = 20/231 (8%)

Query: 29  TDTVGFRTIKVKFSEVVGAIKNDID-------------QKISFVASGKEYLSKEVGSFIS 75
             T GF+  +  F +++                     Q  + V           G+   
Sbjct: 1   MSTNGFKRQRAVFEDLLYQTLRQPGAQSSEQTTLPSGLQIGTGVRPVATERLHSQGNLSQ 60

Query: 76  TGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQI- 133
           T    D A++G+ +F ++ P G    TRDG F+V  +G LV+A G      +      + 
Sbjct: 61  TNNSKDIAIKGEGFFQVQMPDGTNAYTRDGSFQVDQNGQLVTAGGFQVQPAITIPANALS 120

Query: 134 PQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED----- 188
                   V    +     + +  + L +   + G      +            +     
Sbjct: 121 MTVGRDGIVSVTLQGQTATQQVGQLTLTTFINNSGLESVGENLYQETASSGAPNETTPGL 180

Query: 189 LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             G  + +G++E SN N   E+  MI   + +   +  +  +++ + +  +
Sbjct: 181 NGGGLLYQGYVETSNVNVAEELVNMIQTQRAYEINSKAVSTSDQMLQKLAQ 231


>gi|331671805|ref|ZP_08372601.1| putative flagella basal body rod protein [Escherichia coli TA280]
 gi|59889781|emb|CAH19137.1| Lateral flagellar rod protein (FlgF-like) [Escherichia coli]
 gi|284920045|emb|CBG33102.1| lateral flagellar rod protein (FlgF-like) [Escherichia coli 042]
 gi|331070794|gb|EGI42153.1| putative flagella basal body rod protein [Escherichia coli TA280]
          Length = 245

 Score =  125 bits (313), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 49/237 (20%), Positives = 84/237 (35%), Gaps = 7/237 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       L+            A+N++N +T GFR            +K           
Sbjct: 1   MDRLIYTALSGASQTLYEQQISANNLANVNTNGFRADMAM--ATNDKVKGGGFDTRYMAQ 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119
            G   ++   G    T   LD A++G  + A  +     + TR+G  +  D G LV   G
Sbjct: 59  EGASGVNDSTGVAEKTERPLDVAIQGAGYIAVQDKNGNEVYTRNGNIQQDDQGQLV-IDG 117

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176
              + D   + +         + G        G V ATM +     VD+    + +   G
Sbjct: 118 NLVLGDNGPIILPPNAIASFGSDGTLSVTPDDGDVTATMDIDRLKLVDIPVANLAKNPEG 177

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           +       P +    + V  GFLE SN +++ EM   I + ++F +   ++   E  
Sbjct: 178 MLITADGVPAQRDENIKVSGGFLEGSNVSAVSEMMSSIAMNRQFEAQIKMMKTAEDI 234


>gi|90423018|ref|YP_531388.1| flagellar basal body rod protein FlgF [Rhodopseudomonas palustris
           BisB18]
 gi|90105032|gb|ABD87069.1| flagellar basal body rod protein [Rhodopseudomonas palustris
           BisB18]
          Length = 254

 Score =  125 bits (313), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 60/251 (23%), Positives = 119/251 (47%), Gaps = 10/251 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN-----DIDQK 55
           M+ +  IGL+ Q+ LE+++  VA+N++N +T GF+  K  F E +    +       D++
Sbjct: 1   MENALLIGLSRQMTLERQMDVVANNVANVNTTGFKADKSLFQEYLSPGAHEDNFIGRDRR 60

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115
           +S+V     +     G    T   LD A++G+A+ A+++P G   TRDG  ++   G LV
Sbjct: 61  VSYVQDRATFHDFSSGPLEQTKNPLDVAIDGNAFLAVQTPAGERFTRDGGLQINAQGQLV 120

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI----ATMGLYSVDMSQGFVR 171
           +ASG   +     +  Q   K+          + +    +      + L +   +Q  ++
Sbjct: 121 TASGYQVLGTNGPIVFQPTDKEITIADDGNVTVLEGSSAVDSLRGKLRLVNFAEAQRLLK 180

Query: 172 RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
             ++  S          L+   V +G++E SN N++ EM +MI +T+ +  I++++ +  
Sbjct: 181 EGSNLYSAGPGAAAQPALT-ARVHQGYIEKSNVNAVAEMSKMIEVTRAYTQISSMLQQQG 239

Query: 232 KSMLEAIRNIA 242
                A+  +A
Sbjct: 240 DLRKTALEKLA 250


>gi|315586347|gb|ADU40728.1| flagellar basal-body rod protein [Helicobacter pylori 35A]
          Length = 269

 Score =  125 bits (313), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 50/268 (18%), Positives = 99/268 (36%), Gaps = 26/268 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDID---- 53
           MQ  +     A      RL   ++N++N +T GF+        F  +    +  +     
Sbjct: 1   MQNGYYAATGAMATQFNRLDLTSNNLANLNTNGFKRDDAITGDFLRLYQQYREQLPLEDQ 60

Query: 54  ----------QKISFVASGKEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTR 102
                              + Y  + +G+F  T   LDFAL   + +FA+++  G+  TR
Sbjct: 61  TKASAKYLNRNLNRVPILSEIYTDRSLGAFEKTHNPLDFALTSPNLYFAIQTNEGVAYTR 120

Query: 103 DGRFKVTDDGSLVSASGKYP------VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156
           DG F V  DG LV+ +G               + +   + +   N       ++      
Sbjct: 121 DGHFSVDKDGFLVTLNGFRVLSRSGLNEKGGIMLMPNAEIEVNQNGEITFRDNEAPIQAG 180

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
            + L S    +   +   +  +        +      +++  LE SN N+++EM  +I +
Sbjct: 181 ALALVSFSEPKNLKKIGQNLYTYQGEGI-HQISDSGALRQYMLEKSNVNAVHEMSALIGI 239

Query: 217 TQKFNSITTLIDE-NEKSMLEAIRNIAS 243
            +  +  + ++    +    EAI  +AS
Sbjct: 240 NRFLDMYSKVLKTHQDDMNAEAINKLAS 267


>gi|322432976|ref|YP_004210225.1| flagellar basal-body rod protein FlgF [Acidobacterium sp. MP5ACTX9]
 gi|321165203|gb|ADW70907.1| flagellar basal-body rod protein FlgF [Acidobacterium sp. MP5ACTX9]
          Length = 246

 Score =  125 bits (313), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 49/245 (20%), Positives = 104/245 (42%), Gaps = 10/245 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M +       A +A    L T+A+N++N+ T GFR     FS V+      +  +++   
Sbjct: 1   MDSGLYAACTALMARTDALDTIANNLANSSTGGFRARHTTFSSVLAGSGRPLASQLNEAT 60

Query: 61  SGK-----EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115
           +        +L  + GS   TG++LD  ++G  +  +++  G   TR+G  +V+  G L+
Sbjct: 61  NSYGLLGGSHLDMQQGSLARTGSDLDVGIDGPGFLTVKTASGNAYTRNGSLQVSTQGQLI 120

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
           +A+G+  + +   + I    ++    +   G IS  G +   + L     +       +S
Sbjct: 121 TATGEPVLGENGPITI---PRNSSVTISADGTISANGAIAGKLKLVEFSATADPQSMGSS 177

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
                +P   +   S   V++G LE SN N +  + ++I+  +    +   +   +  + 
Sbjct: 178 YY--TVPDKDVVAASKSEVRQGMLEGSNVNPVASVIELINAQRAAEGMRHAMTMIDTEID 235

Query: 236 EAIRN 240
           +    
Sbjct: 236 KTAAQ 240


>gi|149184208|ref|ZP_01862526.1| Flagellar basal-body rod FlgF [Erythrobacter sp. SD-21]
 gi|148831528|gb|EDL49961.1| Flagellar basal-body rod FlgF [Erythrobacter sp. SD-21]
          Length = 246

 Score =  125 bits (313), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 45/240 (18%), Positives = 82/240 (34%), Gaps = 6/240 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M    +  L+   A       +A NM+N +T+GFR   +    V   I+   ++  +   
Sbjct: 1   MDRLIHTALSGMRASMDSQRVIASNMANANTLGFRAELLDQRPV--TIEGQPNEARAMQI 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G  I TG  LD A+   A  A+++       TR G   V+  G LV+  G
Sbjct: 59  ARVRGADMSSGQIIETGRNLDVAVTTQALMAVQAEDGTEAYTRRGDLSVSSTGLLVNGEG 118

Query: 120 KYP---VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           +        +   P+ IP       +      +          +         + +   G
Sbjct: 119 RPVLGETGPITIPPVGIPAISPDGTITIADPTTPDQPPAKIGRIKMASWEGSPISKTLDG 178

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           +        L      ++K G LE SN  +   + +MI   + F   T ++   ++    
Sbjct: 179 LFRVEGGGILPTDETASLKTGALEQSNVKTTEVLVEMIEAQRLFAMRTKIVSTAKEIDES 238


>gi|217033353|ref|ZP_03438784.1| hypothetical protein HP9810_9g106 [Helicobacter pylori 98-10]
 gi|216944294|gb|EEC23719.1| hypothetical protein HP9810_9g106 [Helicobacter pylori 98-10]
          Length = 269

 Score =  125 bits (313), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 50/268 (18%), Positives = 97/268 (36%), Gaps = 26/268 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDID---- 53
           MQ  +     A      RL   ++N++N +T GF+        F  +    +  +     
Sbjct: 1   MQNGYYAATGAMATQFNRLDLTSNNLANLNTNGFKRDDAITGDFLRLYQQYREQLPLEDQ 60

Query: 54  ----------QKISFVASGKEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTR 102
                              + Y  + +G+F  T   LDFAL   + +FA+++  G+  TR
Sbjct: 61  TKASAKYLNRNLNRVPILSEIYTDRSLGAFEETHNPLDFALTSPNLYFAIQTNEGVAYTR 120

Query: 103 DGRFKVTDDGSLVSASGKYP------VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156
           DG F V  DG LV+ +G               + +     +   N       ++      
Sbjct: 121 DGHFSVDKDGFLVTLNGFRVLSRSGLNEKGGIMLMPNAGIEVNQNGEITFRDNEAPIQAG 180

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
            + L S    +   +   +  +        +      +++  LE SN N++ EM  +I +
Sbjct: 181 ALALVSFSEPKNLKKIGQNLYTYQGEGV-HQVSDSGALRQYMLEKSNVNAVREMSALIGI 239

Query: 217 TQKFNSITTLIDE-NEKSMLEAIRNIAS 243
            +  +  + ++    +    EAI  +AS
Sbjct: 240 NRFLDMYSKVLKTHQDDMNAEAINKLAS 267


>gi|78358199|ref|YP_389648.1| flagellar basal-body rod protein [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78220604|gb|ABB39953.1| flagellar basal-body rod protein, putative [Desulfovibrio
           desulfuricans subsp. desulfuricans str. G20]
          Length = 260

 Score =  125 bits (313), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 58/259 (22%), Positives = 101/259 (38%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           MQ S    L   L  E RL+ +A+N++N +T G++   + F +   +  +D   +     
Sbjct: 1   MQDSMYSALFGALTNEHRLNNIANNLANVNTTGYKRDVLAFKDTFLSFAHDEVMEPIPNV 60

Query: 61  SGKEYLS----------------KEVGSFISTGTELDFALEGDAWFALESPRGIILTRDG 104
             K+                      GS   TG  LD A+ GD +F + +P G   TR+G
Sbjct: 61  RSKKMFPEPIHIAKPRIALAKTDFSQGSLKLTGGTLDMAVHGDGFFKVRTPDGEFYTRNG 120

Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
            F+ T DG LV+  G   +     + I          V E G I   G+ I  + + ++D
Sbjct: 121 NFRQTSDGQLVTQQGWPVLGAGGDIQI---PPRANLTVAENGTIYADGEEIGQVQVVTLD 177

Query: 165 MSQGFVRRENSGIS-PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223
                 ++ ++              +    V +GFLE +N   + EM  MI   ++F + 
Sbjct: 178 NLDALEKQGSNLFRLREGAEAQEVPVENPVVLQGFLETANVEVVTEMVNMIEANRQFEAY 237

Query: 224 TTLIDENEKSMLEAIRNIA 242
             ++   +     A   + 
Sbjct: 238 QKIMQTTDAVDKMATTQVG 256


>gi|317180747|dbj|BAJ58533.1| flagellar basal-body rod protein [Helicobacter pylori F32]
          Length = 269

 Score =  125 bits (313), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 50/268 (18%), Positives = 99/268 (36%), Gaps = 26/268 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDID---- 53
           MQ  +     A      RL   ++N++N +T GF+        F  +    +  +     
Sbjct: 1   MQNGYYAATGAMATQFNRLDLTSNNLANLNTNGFKRDDAITGDFLRLYQQYREQLPLEDQ 60

Query: 54  ----------QKISFVASGKEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTR 102
                              + Y  + +G+F  T   LDFAL   + +FA+++  G+  TR
Sbjct: 61  TKASAKYLNRNLNRVPILSEIYTDRSLGAFEETHNPLDFALTSPNLYFAIQTNEGVAYTR 120

Query: 103 DGRFKVTDDGSLVSASGKYP------VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156
           DG F V  DG LV+ +G               + +   + +   N       ++      
Sbjct: 121 DGHFSVDKDGFLVTLNGFRVLSRSGLNEKGGIMLMPNAEIEVNQNGEITFRDNEAPIQAG 180

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
            + L S    +   +   +  +        +      +++  LE SN N+++EM  +I +
Sbjct: 181 ALALVSFSEPKNLKKIGQNLYTYQGEGV-HQISDSGALRQYMLEKSNVNAVHEMSTLIGI 239

Query: 217 TQKFNSITTLIDE-NEKSMLEAIRNIAS 243
            +  +  + ++    +    EAI  +AS
Sbjct: 240 NRFLDMYSKVLKTHQDDMNAEAINKLAS 267


>gi|85715053|ref|ZP_01046038.1| Flagellar basal body rod protein [Nitrobacter sp. Nb-311A]
 gi|85698250|gb|EAQ36122.1| Flagellar basal body rod protein [Nitrobacter sp. Nb-311A]
          Length = 255

 Score =  124 bits (312), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 57/252 (22%), Positives = 116/252 (46%), Gaps = 11/252 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN-----DIDQK 55
           M+ +  IGL+ Q+ LE+++  VA+N++N +T G++  +  F E +    +       D++
Sbjct: 1   MENALLIGLSRQMMLERQIDVVANNVANVNTNGYKADRSLFEEYLMPGAHEDNFVGRDRR 60

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115
           +SFV     +     G    T   LD A++G+A+  +++P G   TRDG  ++   G LV
Sbjct: 61  LSFVQDRATFHDFAGGPTEQTKNPLDVAIDGEAFLVVQTPNGERYTRDGGLQINAQGQLV 120

Query: 116 SASGKYPVLDM-----ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170
           +ASG   +              I    +      +G  +    +  T+ L S    Q  +
Sbjct: 121 TASGYPVLGSNGPIRFQQTDRDITISADGTVTVIEGLNNSTNSIRGTLRLVSFRQPQKLI 180

Query: 171 RRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
           +  ++  +        +  +   + +GF+E SN +++ EM +M+ +++ +  + TL+ + 
Sbjct: 181 KEGSNLYAAGESNFA-QPDTKSQIHQGFIERSNVSAVTEMSRMVQVSRAYTQMATLLQQQ 239

Query: 231 EKSMLEAIRNIA 242
                 AI  +A
Sbjct: 240 SDLQRTAIEKLA 251


>gi|317177169|dbj|BAJ54958.1| flagellar basal-body rod protein [Helicobacter pylori F16]
          Length = 269

 Score =  124 bits (312), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 50/268 (18%), Positives = 98/268 (36%), Gaps = 26/268 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDID---- 53
           MQ  +     A      RL   ++N++N +T GF+        F  +    +  +     
Sbjct: 1   MQNGYYAATGAMATQFNRLDLTSNNLANLNTNGFKRDDAITGDFLRLYQQYREQLPLEDQ 60

Query: 54  ----------QKISFVASGKEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTR 102
                              + Y  + +G+F  T   LDFAL   + +FA+++  G+  TR
Sbjct: 61  TKASAKYLNRNLNRVPILSEIYTDRSLGAFEETHNPLDFALTSPNLYFAIQTNEGVAYTR 120

Query: 103 DGRFKVTDDGSLVSASGKYP------VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156
           DG F V  DG LV+ +G               + +   + +   N       ++      
Sbjct: 121 DGHFSVDKDGFLVTLNGFRVLSRSGLNEKGGIMLMPNAEIEVNQNGEITFRDNEAPIQAG 180

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
            + L S    +   ++    +         +      +++  LE SN N++ EM  +I +
Sbjct: 181 ALALVSFSEPKNL-KKIGQNLYTYHGEGVHQVSDSSALRQYMLEKSNVNAVREMSALIGI 239

Query: 217 TQKFNSITTLIDE-NEKSMLEAIRNIAS 243
            +  +  + ++    +    EAI  +AS
Sbjct: 240 NRFLDMYSKVLKTHQDDMNAEAINKLAS 267


>gi|322421726|ref|YP_004200949.1| flagellar hook-basal body protein [Geobacter sp. M18]
 gi|320128113|gb|ADW15673.1| flagellar hook-basal body protein [Geobacter sp. M18]
          Length = 294

 Score =  124 bits (312), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 38/290 (13%), Positives = 88/290 (30%), Gaps = 50/290 (17%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
           ++   G+   L   + ++ + +N+SN +T+GF+  +  FS+++     +  Q    V   
Sbjct: 5   SALFTGVTGLLQNGEAMNVIGNNISNVNTIGFKGARTLFSDMLSQNVGNDSQIGKGVQMQ 64

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWF---------ALESPRGIILTRDGRFKVTDDGS 113
                   GS  S+    D A++G+ +F          + +     L+R G F+V +  +
Sbjct: 65  VVQNVFSQGSTQSSENVTDLAIQGNTFFALKPSTAASPVATQNSAFLSRAGAFQVDNTLT 124

Query: 114 LVSASGKYPVLDMASVPIQI-------------------------------PQKDEIFNV 142
           LV+  G   +    +    +                                        
Sbjct: 125 LVNPDGYQVLDTQGNPIKFLNSGAAPTTDFGKIISVDNSGLITYLATDGITQNYYNTSGA 184

Query: 143 GEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP----------TPLEDLSGV 192
                       +  + + +        +   S                      +    
Sbjct: 185 VGVAATVANSATVQRLAVVTASDPTALTKLGGSLYQATTAAGVSGAAFSLAANKPNGVSE 244

Query: 193 TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            +    LE SN +   E  +MI   + +++ +  I   ++   E ++ I 
Sbjct: 245 KILSNTLEQSNVDMASEFVKMIVTQRAYSANSKTITTTDQMTQEVLQLIR 294


>gi|288870659|ref|ZP_06114878.2| flagellar basal-body rod protein FlgG [Clostridium hathewayi DSM
           13479]
 gi|288866377|gb|EFC98675.1| flagellar basal-body rod protein FlgG [Clostridium hathewayi DSM
           13479]
          Length = 248

 Score =  124 bits (312), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 56/249 (22%), Positives = 102/249 (40%), Gaps = 19/249 (7%)

Query: 12  QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK---ISFVASGKEYLSK 68
             A +  L   A+NM+N  T G++ ++  F +++    +  +        V +       
Sbjct: 1   MNAFQSELDVTANNMANVSTPGYKVLRSSFDDLLYTQMDTKNANQMVGHGVKTNGAETVF 60

Query: 69  EVGSFISTGTELDFALEGDAWFALESPR----GIILTRDGRFKVTD--DGSLVSASGKYP 122
           E G F  T  ELDFA+ G A+FA+ES          TRDG F+++   +G+ ++    + 
Sbjct: 61  EQGIFEKTERELDFAILGKAYFAVESENEDAEEPYYTRDGSFQISATDEGNYLTTRDGHY 120

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEIS--QKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
           VL      I++  K    + G+K   +      +   +GLY+ +   G V    +  S  
Sbjct: 121 VLSRDGDRIELEYKTVEESNGKKQFTNELDLSGLSEVIGLYTCENPDGLVPVGKNLYSTG 180

Query: 181 IP-------PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
                        E  +G  +  G LE S+     EM  ++   + F   + ++   ++ 
Sbjct: 181 AASGEWIPIEDMDETQAGSRLLTGTLELSSTYVPTEMINLLQAQRAFQLNSRIVSAADQ- 239

Query: 234 MLEAIRNIA 242
           M E I N+ 
Sbjct: 240 MEEMINNLR 248


>gi|332673202|gb|AEE70019.1| flagellar basal-body rod protein [Helicobacter pylori 83]
          Length = 269

 Score =  124 bits (312), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 49/268 (18%), Positives = 98/268 (36%), Gaps = 26/268 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDID---- 53
           MQ  +     A      RL   ++N++N +T GF+        F  +    +  +     
Sbjct: 1   MQNGYYAATGAMATQFNRLDLTSNNLANLNTNGFKRDDAITGDFLRLYQQYREQLPLEDQ 60

Query: 54  ----------QKISFVASGKEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTR 102
                              + Y  + +G+F  T   LDFAL   + +FA+++  G+  TR
Sbjct: 61  TKASAKYLNRNLNRVPILSEIYTDRSLGAFEETHNPLDFALTSPNLYFAIQTNEGVAYTR 120

Query: 103 DGRFKVTDDGSLVSASGKYP------VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156
           DG F V  DG LV+ +G               + +   + +   N       ++      
Sbjct: 121 DGHFSVDKDGFLVTLNGFRVLSRSGLNEKGGIMLMPNAEIEVNQNGEITFRDNEAPIQAG 180

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
            + L S    +   +   +  +        +      +++  LE SN N++ EM  +I +
Sbjct: 181 ALALVSFSEPKNLKKIGQNLYTYQGEGV-HQVSDSGALRQYMLEKSNVNAVREMSALIGI 239

Query: 217 TQKFNSITTLIDE-NEKSMLEAIRNIAS 243
            +  +  + ++    +    EAI  +A+
Sbjct: 240 NRFLDMYSKVLKTHQDDMNAEAINKLAA 267


>gi|34497160|ref|NP_901375.1| flagellar basal-body rod protein FlgF [Chromobacterium violaceum
           ATCC 12472]
 gi|34103017|gb|AAQ59380.1| flagellar basal-body rod protein FlgF [Chromobacterium violaceum
           ATCC 12472]
          Length = 243

 Score =  124 bits (312), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 53/245 (21%), Positives = 87/245 (35%), Gaps = 9/245 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       ++    + +     A+N++N +T GFR        V   +            
Sbjct: 1   MDKLIYTAMSGAGRMLRAQQIHANNLANAETGGFRADIDT--AVSQQVPGYGYDARLLSQ 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +    LS   G+ + TG +LD AL+GD +FA+ +P      TR G      DG+L  +  
Sbjct: 59  NAPTALSDRNGTVVETGRDLDIALQGDGFFAVSAPDGSEAYTRAGSMVAGPDGTL--SVN 116

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176
            +PVL             ++    +           A   +     V      V +   G
Sbjct: 117 GHPVLGDGGPIRLPEGFLKVSVAADGTISVLNPDDAAMQPVDKLKLVKPDPREVGKRPDG 176

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           +       PL     V V+ G LE SN +++ EM   + L + F     L +     M E
Sbjct: 177 LIAARQGGPLPVDDSVRVQSGHLERSNVSAVEEMVSTMTLNRNFEMQMKLFNAASD-MNE 235

Query: 237 AIRNI 241
           A   +
Sbjct: 236 AGNRL 240


>gi|268589981|ref|ZP_06124202.1| flagellar basal-body rod protein FlgF [Providencia rettgeri DSM
           1131]
 gi|291314699|gb|EFE55152.1| flagellar basal-body rod protein FlgF [Providencia rettgeri DSM
           1131]
          Length = 251

 Score =  124 bits (312), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 84/251 (33%), Gaps = 11/251 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       +       +  + V++N++N  T GF+        V   I  D +Q  + V 
Sbjct: 1   MDHVIYTAMGGARHALENQAIVSNNIANVSTAGFKAQLSAMRAV--PIHGDSEQTRTLVV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASG 119
           +         G    TG + D AL    + A+E +      TR+G  +V+ +G LV    
Sbjct: 59  ASTPGADMSQGPLNYTGKQTDVALNDKHFLAVELADGTEAYTRNGNIQVSSEGELVIGER 118

Query: 120 K-YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV--DMSQGFVRRENSG 176
           +        +VP                  +    ++  +G   V     Q  +R E+  
Sbjct: 119 RLQGDGGPINVPPNAELTIGADGTVTALLATDPPTMLGQIGRLKVVEAQPQDLIRGEDGL 178

Query: 177 I-----SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
                         L       V  G +E SN N+   M  MI   + F     ++   +
Sbjct: 179 FHLSPQGQAANGNALPQSERGIVTAGVIEGSNVNAAEAMVSMIANARHFEMQMKVVRSAD 238

Query: 232 KSMLEAIRNIA 242
           ++   A + +A
Sbjct: 239 ENAQRANQLLA 249


>gi|167770196|ref|ZP_02442249.1| hypothetical protein ANACOL_01539 [Anaerotruncus colihominis DSM
           17241]
 gi|167667518|gb|EDS11648.1| hypothetical protein ANACOL_01539 [Anaerotruncus colihominis DSM
           17241]
          Length = 254

 Score =  124 bits (312), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 50/257 (19%), Positives = 93/257 (36%), Gaps = 18/257 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSE-----VVGAIKNDI 52
           M   F    +  L  E+ L+ + +N+ N  T GFR  +V    F +     +       I
Sbjct: 1   MLRGFYTAASGVLMQERTLNVLTNNLVNARTPGFRASRVVSTTFEDEYLVRLEKGASGAI 60

Query: 53  DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL-----ESPRGIILTRDGRFK 107
                           +  S   TG   D A+ G+ +F +     +      LTR+G F 
Sbjct: 61  GTGAPVRIVSDVPTLFDPSSLEETGRPYDLAINGEGFFNILTTDAQGNERQYLTRNGNFD 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           V ++G LV       +         I      F V   G+I  +   +    L +V    
Sbjct: 121 VDEEGMLVLRGHGQVL----GEKGPIQLDTANFTVDYNGDIYNEKGKLVDKVLVTVPPQD 176

Query: 168 GFVRRENSGISPNIPPTPL-EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
             +  + +G+      T   +    V + +G+ E SN +   EM  ++   + F + ++ 
Sbjct: 177 AELEVDANGMYTAQDMTANTQVGDNVMIVQGWTERSNIDPNREMALVMEAQRTFQACSSA 236

Query: 227 IDENEKSMLEAIRNIAS 243
           +   +K   ++   IA+
Sbjct: 237 LQILDKINQKSATQIAA 253


>gi|327254555|gb|EGE66171.1| flagellar basal-body rod protein FlgF [Escherichia coli STEC_7v]
          Length = 245

 Score =  124 bits (312), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 47/237 (19%), Positives = 84/237 (35%), Gaps = 7/237 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       L+            A+N++N +T GFR            +K           
Sbjct: 1   MDRLIYTALSGASQTLYEQQISANNLANVNTNGFRADMAM--ATNDKVKGGGFDTRYMAQ 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119
            G   ++   G    T   LD A++G  + A  +     + TR+G  +  D G  ++  G
Sbjct: 59  EGASGVNDSTGVAEKTERPLDVAIQGAGYIAVQDKNGNEVYTRNGNIQQNDQG-QLTIDG 117

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176
              + D   + +         + G        G V ATM +     VD+    + +   G
Sbjct: 118 NLVLGDNGPIILPPNAIASFGSDGTLSVTPDDGDVTATMDIDRLKLVDIPVANLAKNPEG 177

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           +       P +    + V  GFLE SN +++ EM   I + ++F +   ++   E  
Sbjct: 178 MLVTSDGIPAQRDENIKVSGGFLEGSNVSAVSEMMSSIAMNRQFEAQIKMMKTAEDI 234


>gi|225569956|ref|ZP_03778981.1| hypothetical protein CLOHYLEM_06051 [Clostridium hylemonae DSM
           15053]
 gi|225161426|gb|EEG74045.1| hypothetical protein CLOHYLEM_06051 [Clostridium hylemonae DSM
           15053]
          Length = 250

 Score =  124 bits (311), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 46/254 (18%), Positives = 94/254 (37%), Gaps = 18/254 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIK---VKF-SEVVGAIKN------ 50
           M   F    +  L   +R++ +++NMSN  T G++  +     F  E++    N      
Sbjct: 1   MFQGFYNLTSGVLTQTRRMNVISNNMSNVSTPGYKRDQFVCKTFKEEMIYRSGNKDKSSP 60

Query: 51  -DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109
             +      VA+ + Y     G + ST + LDFA+    +F ++S  G + TR+G F + 
Sbjct: 61  AQLGTMNRIVAADRNYTDFAAGGYESTESPLDFAIGTSGFFRIQSGNGTVYTRNGSFSLD 120

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM-SQG 168
           ++G L  A      +   + PI +       +             +  + +       + 
Sbjct: 121 NNGYL--ALQGVGRVLGQNGPIYLGTDKIRADRLGNLYSEDGNNFLGRLSVVDFQNYDEE 178

Query: 169 FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228
             +      +     T +       V    LE SN   + EM QM+   +   S   ++ 
Sbjct: 179 LTKTTGDVYTSAGQGTAVNAD----VVHKALESSNVEPVNEMTQMMAGERALQSSAQVLK 234

Query: 229 ENEKSMLEAIRNIA 242
             ++ + + +  + 
Sbjct: 235 MYDQIIGKVVTQLG 248


>gi|296331270|ref|ZP_06873742.1| flagellar basal-body rod protein [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305676257|ref|YP_003867929.1| putative flagellar basal-body rod protein [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296151385|gb|EFG92262.1| flagellar basal-body rod protein [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305414501|gb|ADM39620.1| putative flagellar basal-body rod protein [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 270

 Score =  124 bits (311), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 47/272 (17%), Positives = 102/272 (37%), Gaps = 34/272 (12%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVV----------GA 47
           M        +A +A ++R   +++N++N +T G++  +     F E++          G 
Sbjct: 1   MLKGLYTATSAMIAQQRRTEMLSNNIANANTSGYKADQGSMRAFPEMLLSRIESKSPAGT 60

Query: 48  IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA-------------WFALES 94
            + +I    + V   +       GS  ST    D  L  +              ++ +++
Sbjct: 61  SRTEIGSVNTGVYMQELKPLFTQGSLKSTDQPTDITLVENQVPVNTETNENAALFYPVQT 120

Query: 95  PRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV 154
             GI  ++   F + ++ + ++ +G+  +         I   +E F V E G ++  G+ 
Sbjct: 121 ADGIRYSKSSTFSLNEN-NQLTINGRPILSTDGQP---ITVDNENFTVSENGTVTMNGRT 176

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNI----PPTPLEDLSGVTVKRGFLEDSNANSMYEM 210
              + +   +  +   R  N   S       P     +    ++K+G  E SN +     
Sbjct: 177 AGQIDVRMAEDVRNLKRDGNDLYSTADGNDLPSAAGNNQVSYSLKQGVSELSNVDVTSAY 236

Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            +M    + F +   +I   +KSM +A   I 
Sbjct: 237 TEMTEAYRSFEANQKVIQAYDKSMDKAANEIG 268


>gi|242238970|ref|YP_002987151.1| flagellar basal body rod protein [Dickeya dadantii Ech703]
 gi|242131027|gb|ACS85329.1| flagellar basal body rod protein [Dickeya dadantii Ech703]
          Length = 251

 Score =  124 bits (311), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 48/247 (19%), Positives = 80/247 (32%), Gaps = 13/247 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + S + +N++N  T GFR        V   +        +   
Sbjct: 1   MDHAIYTAMGAASQTLDQQSVITNNLANASTPGFRAQLSAMRAV--PVDGPTLPTRTLSI 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G    T   LD A++ D W A++ P      TR+G  ++   G  ++  G
Sbjct: 59  ASTPGADMSQGPLDYTSRPLDVAVQNDGWLAVQLPNGEEAYTRNGSIQIDPTG-QLTIQG 117

Query: 120 KYPVLDMAS---VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
              V D                   V   G+      V     L  V      + R + G
Sbjct: 118 FPVVGDAGPLVVPTQASITISANGTVASLGDGDSPNTVAQVGALKLVKGDSTQLVRGDDG 177

Query: 177 ISPNIP------PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
           +    P         L     V V  G LE SN N++  +  MI   ++F     +I   
Sbjct: 178 LFHVSPAASQQVGNALPADPTVRVMPGVLEGSNVNTVESLVDMIGSARRFEMQMKVIASV 237

Query: 231 EKSMLEA 237
           +++   A
Sbjct: 238 DQNAESA 244


>gi|229917022|ref|YP_002885668.1| hypothetical protein EAT1b_1296 [Exiguobacterium sp. AT1b]
 gi|229468451|gb|ACQ70223.1| protein of unknown function DUF1078 domain protein [Exiguobacterium
           sp. AT1b]
          Length = 260

 Score =  124 bits (311), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 43/253 (16%), Positives = 92/253 (36%), Gaps = 19/253 (7%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
             S    + +   L+++L     N++N DTVGF+  +  F+ ++    N+  +    V  
Sbjct: 1   MQSIYNSVNSLSQLQRQLDVTGHNIANVDTVGFKRQQGHFASLLSQAYNNQPRPEFEVGR 60

Query: 62  GKE--------------YLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTRDGRF 106
                                 +G   +T   LD  L+    +F +++P G+ +TR G  
Sbjct: 61  DTPNGIRIGVGGHVADITQQFNIGQVRTTDRGLDVFLKASRQFFVVDTPNGVGVTRSGNM 120

Query: 107 KVT--DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
           +++  D+ +LV  +G   + D  +               +   ++    V    G   + 
Sbjct: 121 QLSVGDETTLVDVNGNPLLGDDGNPITMPNDATNQRIRQDGVVVASVNGVEQEFGRLDIV 180

Query: 165 M--SQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222
              +   +R     +      T ++   G  +  G LE SN +   EM  M    + +  
Sbjct: 181 EVRNTSELRPLGDNVFAADLETEVDRPLGNLLIEGTLESSNVDLTKEMTDMTITQRAYQM 240

Query: 223 ITTLIDENEKSML 235
            +  +  +++ M 
Sbjct: 241 NSRAMSMSDQMMG 253


>gi|118474276|ref|YP_891712.1| flagellar basal-body rod protein [Campylobacter fetus subsp. fetus
           82-40]
 gi|118413502|gb|ABK81922.1| flagellar basal-body rod protein [Campylobacter fetus subsp. fetus
           82-40]
          Length = 270

 Score =  124 bits (311), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 39/267 (14%), Positives = 96/267 (35%), Gaps = 24/267 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDIDQKIS 57
           MQ  +     A +    RL  + +N++N +T+G++   V    F  +    ++ +  +  
Sbjct: 1   MQNGYYQATGAMVTQFNRLDVITNNLANVNTIGYKRDDVVIADFERIFKETRDILPLENH 60

Query: 58  FVASGKEYLSKEVGSFISTGTELDFALEG---------------DAWFALESPRGIILTR 102
              + K                 DF + G               D +  +++P G+ LT+
Sbjct: 61  TRDAAKFLNRTIDRVPQINEIYTDFNVGGLKMTNNPLDVAIGKSDLFLLVDTPNGVRLTK 120

Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQ-----IPQKDEIFNVGEKGEISQKGKVIAT 157
           +G   + ++G +V+  G   + +      +        +D    + + G I    + +  
Sbjct: 121 NGALNLDNEGYIVTKEGYRVLPNNYENQPEEVRGIQIPQDAPVTIDKDGNIYSNNENVGR 180

Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217
             +      +   +  ++           +  +  +V +G+ + SN N + EM  ++   
Sbjct: 181 FFIAQPREIRNLQKEGDNLFVLPNLNELNDVENSGSVAQGYSQISNVNPVIEMVNLVETN 240

Query: 218 QKFNSITTLIDEN-EKSMLEAIRNIAS 243
           +  +    ++  +      EAI  +AS
Sbjct: 241 RLVDMYQRVMSTHMNDINQEAITKLAS 267


>gi|103488388|ref|YP_617949.1| flagellar basal-body rod FlgF [Sphingopyxis alaskensis RB2256]
 gi|98978465|gb|ABF54616.1| Flagellar basal-body rod FlgF [Sphingopyxis alaskensis RB2256]
          Length = 247

 Score =  124 bits (311), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 44/243 (18%), Positives = 82/243 (33%), Gaps = 6/243 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       L+A      R + +A+N++N  T GFR        +   +        +  +
Sbjct: 1   MDRLIYTSLSAMRGSMARQTAIANNLANAQTPGFRADMASAQSLW--LDGSGLDARAMAS 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASG 119
                   + G+  STG +LD A++GDA   ++        TR G  +V+  G L +  G
Sbjct: 59  EEVLGADMKAGTVTSTGRDLDIAMQGDALLVVQAKNGEEAYTRRGDLQVSPSGLLTTGDG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV---DMSQGFVRRENSG 176
                    V I       I   G    + Q G       +  +     +   V +   G
Sbjct: 119 HPVQGGQGPVTIPPADAISIDQQGRVWIVPQGGDPENPQEVDRLRLATPAGSEVAKGLDG 178

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           +        L D     +    +E SN  +   + +MI  ++ +++   +I +       
Sbjct: 179 LFRVKGGGILPDDPEARLLTRSIEGSNVTATSALVEMIEASRSWDTQLKMIGDVRDMDSA 238

Query: 237 AIR 239
              
Sbjct: 239 TAN 241


>gi|317181698|dbj|BAJ59482.1| flagellar basal-body rod protein [Helicobacter pylori F57]
          Length = 269

 Score =  124 bits (310), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 49/268 (18%), Positives = 97/268 (36%), Gaps = 26/268 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDID---- 53
           MQ  +     A      RL   ++N++N +T GF+        F  +    +  +     
Sbjct: 1   MQNGYYAATGAMATQFNRLDLTSNNLANLNTNGFKRDDAITGDFLRLYQQYREQLPLEDQ 60

Query: 54  ----------QKISFVASGKEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTR 102
                              + Y  + +G+F  T   LDFAL   + +FA+++  G+  TR
Sbjct: 61  TKASAKYLNRNLNRVPILSEIYTDRSLGAFEETHNPLDFALTSPNLYFAIQTNEGVAYTR 120

Query: 103 DGRFKVTDDGSLVSASGKYP------VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156
           DG F V  DG LV+ +G               + +     +   N       ++      
Sbjct: 121 DGHFSVDKDGFLVTLNGFRVLSRSGLNEKGGIMLMPNAGIEVNQNGEITFRDNEAPIQAG 180

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
            + L S    +   +   +  +        +      +++  LE SN N++ EM  +I +
Sbjct: 181 ALALVSFSEPKNLKKIGQNLYTYQGEGV-HQISDSGALRQYMLEKSNVNAVREMSALIGI 239

Query: 217 TQKFNSITTLIDE-NEKSMLEAIRNIAS 243
            +  +  + ++    +    EAI  +A+
Sbjct: 240 NRFLDMYSKVLKTHQDDMNAEAINKLAT 267


>gi|222824020|ref|YP_002575594.1| flagellar distal rod protein FlgG [Campylobacter lari RM2100]
 gi|222539242|gb|ACM64343.1| flagellar distal rod protein FlgG [Campylobacter lari RM2100]
          Length = 269

 Score =  124 bits (310), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 56/268 (20%), Positives = 106/268 (39%), Gaps = 26/268 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDID---- 53
           MQ  +     A +    RL  V +N++N +T G++   V    F  +    ++++     
Sbjct: 1   MQNGYYQATGAMVTQFNRLDVVTNNLANVNTSGYKRDNVVIADFKRIFKETQDELPIQNH 60

Query: 54  ----------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL--ESPRGIILT 101
                                Y +  VGS   T   LD AL  +  F L   +   I LT
Sbjct: 61  TRDAARFVNTTIDRVPQVNHVYTNFSVGSMKMTHNPLDLALTREDTFYLIKTNNGEIRLT 120

Query: 102 RDGRFKVTDDGSLVSASGKYP-----VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156
           +DG F++ ++G LV+  G          +  +  I+I       NV + G +S   + IA
Sbjct: 121 QDGNFQLDEEGYLVNRQGYRVLSSDYFNNPENDGIRIGNSTSFINVDKNGIVSASNQNIA 180

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
            + +  VD  +   +  ++    ++     +  +   +++GF + SN N + EM  +I  
Sbjct: 181 RLFVAQVDDLRDLQKDGDNMYKVDLNKV-RDLPNSNAIRQGFTQGSNVNPVTEMVGLIEA 239

Query: 217 TQKFNSITTLIDEN-EKSMLEAIRNIAS 243
            +       ++  + +    EAI  +AS
Sbjct: 240 NRMVEMYQKVMTSHMDDLNQEAINKLAS 267


>gi|225849134|ref|YP_002729298.1| flagellar basal-body rod protein FlgF [Sulfurihydrogenibium
           azorense Az-Fu1]
 gi|225644137|gb|ACN99187.1| flagellar basal-body rod protein FlgF [Sulfurihydrogenibium
           azorense Az-Fu1]
          Length = 237

 Score =  124 bits (310), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 56/239 (23%), Positives = 109/239 (45%), Gaps = 12/239 (5%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV-KFSEVVGAIKNDIDQKISFVASGK 63
             I  +      ++L T+ +N++N +T GF+ I + + S+ +          + F     
Sbjct: 8   IYILASGGSRAVEQLDTITNNIANANTSGFKKILMREISQKIPENVGQTGDLLVFPRFRD 67

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPV 123
             +    G+ I T   LD A+EG+ +F +E+  G   TR+G F + ++G LV  +G Y +
Sbjct: 68  TPVINNQGALIKTDNPLDVAIEGEGFFNVETNVGRFYTRNGHFSINNEGFLVDQNGGYIL 127

Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183
               +        +   ++  KGEI Q G+++AT+ + ++   Q       +G       
Sbjct: 128 --DTNRQRIKLDTNGRVDITTKGEIYQNGRLVATLRVVNLQNLQPVGNGYYNGQ------ 179

Query: 184 TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
              +     T+++GFLE SN N + EM +MI+  ++F+    L    ++ +   +  I 
Sbjct: 180 --EQATERYTLRQGFLEGSNVNIVKEMVEMINSHRRFDIYMNLAKSLDQ-LEGRLNEIG 235


>gi|301645414|ref|ZP_07245355.1| flagellar basal body rod protein FlgF [Escherichia coli MS 146-1]
 gi|307136859|ref|ZP_07496215.1| flagellar basal body rod protein FlgF [Escherichia coli H736]
 gi|331640714|ref|ZP_08341861.1| putative flagella basal body rod protein [Escherichia coli H736]
 gi|301076298|gb|EFK91104.1| flagellar basal body rod protein FlgF [Escherichia coli MS 146-1]
 gi|315616826|gb|EFU97443.1| flagellar basal-body rod protein FlgF [Escherichia coli 3431]
 gi|331040088|gb|EGI12296.1| putative flagella basal body rod protein [Escherichia coli H736]
          Length = 245

 Score =  124 bits (310), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 47/237 (19%), Positives = 84/237 (35%), Gaps = 7/237 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       L+            A+N++N +T GFR            +K           
Sbjct: 1   MDRLIYTALSGASQTLYEQQISANNLANVNTNGFRADMAM--ATNDKVKGGGFDTRYMAQ 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119
            G   ++   G    T   LD A++G  + A  +     + TR+G  +  D G  ++  G
Sbjct: 59  EGASGVNDSTGVAEKTERPLDVAIQGAGYIAVQDKNGNEVYTRNGNIQQDDQG-QLAIDG 117

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176
              + D   + +         + G        G V ATM +     VD+    + +   G
Sbjct: 118 NLVLGDNGPIILPPNAIASFGSDGTLSVTPDDGDVTATMDIDRLKLVDIPVANLAKNPEG 177

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           +       P +    + V  GFLE SN +++ EM   I + ++F +   ++   E  
Sbjct: 178 MLITADGVPAQRDENIKVSGGFLEGSNVSAVSEMMSSIAMNRQFEAQIKMMKTAEDI 234


>gi|297379576|gb|ADI34463.1| flagellar basal-body rod protein (flgG) [Helicobacter pylori v225d]
          Length = 269

 Score =  124 bits (310), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 49/268 (18%), Positives = 99/268 (36%), Gaps = 26/268 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDID---- 53
           MQ  +     A      RL   ++N++N +T GF+        F  +    +  +     
Sbjct: 1   MQNGYYAATGAMATQFNRLDLTSNNLANLNTNGFKRDDAITGDFLRLYQQYREQLPLEDQ 60

Query: 54  ----------QKISFVASGKEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTR 102
                              + Y  + +G+F  T   LDFAL   + +FA+++  G+  TR
Sbjct: 61  TKASAKYLNRNLNRVPILSEIYTDRSLGAFEETHNPLDFALTSPNLYFAIQTNEGVAYTR 120

Query: 103 DGRFKVTDDGSLVSASGKYP------VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156
           DG F V  DG LV+ +G               + +   + +   N       ++      
Sbjct: 121 DGHFSVDKDGFLVTLNGFRVLSRSGLNEKGGIMLMPNAEIEVNQNGEITFRDNEAPIQAG 180

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
            + L S    +   +   +  +        +  +   +++  LE SN N++ EM  +I +
Sbjct: 181 ALALVSFSEPKNLKKIGQNLYTYQGEGV-HQISNSSALRQYMLEKSNVNAVREMSALIGI 239

Query: 217 TQKFNSITTLIDE-NEKSMLEAIRNIAS 243
            +  +  + ++    +    EAI  +A+
Sbjct: 240 NRFLDMYSKVLKTHQDDMNAEAINKLAA 267


>gi|15607023|ref|NP_214405.1| flagellar hook basal-body protein FlgG [Aquifex aeolicus VF5]
 gi|2984276|gb|AAC07801.1| flagellar hook basal-body protein FlgG [Aquifex aeolicus VF5]
          Length = 241

 Score =  124 bits (310), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 48/240 (20%), Positives = 90/240 (37%), Gaps = 19/240 (7%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
             I     L  E++L    +NM+N +T  F+   +            +     F  S   
Sbjct: 8   IYILGGGMLLQERKLDVSTNNMANVNTPAFKKDYLTAVSYYVPNGQKVQNTNPFEPSNNY 67

Query: 65  YLS--------KEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVS 116
                         G+ + T   LD A+EG+ +FA+  P GI+ TR G F++ ++G L +
Sbjct: 68  VYPIVNEVIPVLSQGALVKTENPLDLAIEGEGFFAVRGPNGILYTRKGIFRINEEGFLTT 127

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
             G   + +  +    I  + +   + + G I      +  +G++++   Q        G
Sbjct: 128 EEGYQVLDENLNP---IQIQGQNVKITKDGTIFVDENPVGRLGIFNLQNIQKLGEDFFQG 184

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                            V +GF E SN N++ EM ++I         + LI   ++   +
Sbjct: 185 NPTPATDY--------RVYQGFYEASNVNAVKEMVKVIEAVSAHEIFSKLIQMTDEVQGK 236


>gi|148554188|ref|YP_001261770.1| flagellar basal-body rod protein FlgF [Sphingomonas wittichii RW1]
 gi|148499378|gb|ABQ67632.1| flagellar basal-body rod protein FlgF [Sphingomonas wittichii RW1]
          Length = 247

 Score =  123 bits (309), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 46/238 (19%), Positives = 84/238 (35%), Gaps = 7/238 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       L+A  +   R +  A+N++N +TVGFR      + +   +K D     +  +
Sbjct: 1   MDKLIYSSLSAMRSAMARQTMTANNLANANTVGFRGEMSSSTALW--LKGDGFDSRATNS 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWF--ALESPRGIILTRDGRFKVTDDGSLVSAS 118
                     G+   TG +LD AL+G                TR G  ++ D G L +  
Sbjct: 59  GEVTSADMSEGTINETGRDLDVALQGKDTLLAVQSREGDEAYTRRGDLQIGDSGLLTTGD 118

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENS 175
           G   + D   + +    +  I   G    + Q G       +     V  +   V +   
Sbjct: 119 GMPVLGDGGPITLPPYDRLVIAGDGTISIVPQGGDPTQMQMVDRLKLVSTNGSAVAKGLD 178

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           G+        L       V++G +E SN N    +  MI  ++ ++    ++   +  
Sbjct: 179 GLFRPQSGGTLGADPQAAVRQGAIEGSNVNVSTTLIDMIEASRDWDMQVKMMSSAQDI 236


>gi|253574272|ref|ZP_04851614.1| flagellar hook-basal body protein [Paenibacillus sp. oral taxon 786
           str. D14]
 gi|251846749|gb|EES74755.1| flagellar hook-basal body protein [Paenibacillus sp. oral taxon 786
           str. D14]
          Length = 273

 Score =  123 bits (309), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 45/273 (16%), Positives = 99/273 (36%), Gaps = 32/273 (11%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +    + +   ++QRL  +ADN++N++TVG++  +  F + +  ++N          
Sbjct: 1   MNNTVISAMVSMSGIQQRLDLLADNIANSNTVGYKRKEANFEDTLTRVQNQTSDLNLPGR 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                          +  ++   GS   TG   D A++G+A F++  P   I  TR G F
Sbjct: 61  ATPSGFTLGFGSRMSQVTVNYAQGSIQETGNMTDLAIQGNAMFSVMLPGGDIAYTRGGDF 120

Query: 107 KVTDDG------SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQK--GKVIATM 158
            +  D        LV+  G   +                 +       +       +  +
Sbjct: 121 HIQPDPDDAESAFLVNQLGYVVLNSEGDSITFPSDAKLSIDAEGNILATNGEGTTEVGRI 180

Query: 159 GLYSVDMSQGFVRRENSGISPNIPPTPLE---------DLSGVTVKRGFLEDSNANSMYE 209
            L + +     V+++ +         P E              ++++G LE SN +    
Sbjct: 181 ALLTAERPDALVQKDGNLFVLAAGLDPAEAMVDNLSLPQEQRASLRQGALEASNVDLTEA 240

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           M +M+ + + +      +  + ++M+    N+ 
Sbjct: 241 MAEMLQVQRAYQLTARAL-TSGETMMGLANNLR 272


>gi|163789628|ref|ZP_02184066.1| hypothetical protein CAT7_09300 [Carnobacterium sp. AT7]
 gi|159875160|gb|EDP69226.1| hypothetical protein CAT7_09300 [Carnobacterium sp. AT7]
          Length = 251

 Score =  123 bits (309), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 40/251 (15%), Positives = 92/251 (36%), Gaps = 14/251 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--------- 51
           M    +I  +   A++ ++  V+++++N +T G+++  + F+E++    N          
Sbjct: 1   MSIPLSISKSGMNAIQNQMDVVSNDIANINTTGYKSKNISFNELLLNDMNGEAAYLSADA 60

Query: 52  -IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVT 109
                     S     +   G+ +S   +   A+ G+ +F +    G    TRDG F V 
Sbjct: 61  QGSGISIGSKSAVTSTNFTQGALVSDPNDYHLAIAGEGFFGVTGENGERYLTRDGAFHVN 120

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169
            D S+ + +G    +       Q P+ D       +  I  +   +    +     +Q  
Sbjct: 121 GDKSITNDNGDTLEIQATIPINQWPEGDVSIAENGEVTIQSENNSMLVGTIPLFYPAQPN 180

Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
             +       +            ++++ +LE SN +    M +MI   + ++    +   
Sbjct: 181 AMQPVGENKFSYDG--AFGTGEGSIQQHYLEASNVDLASSMTEMILAQRSYSMNLKVAQG 238

Query: 230 NEKSMLEAIRN 240
            ++ M   I  
Sbjct: 239 TDE-MASVINQ 248


>gi|302671950|ref|YP_003831910.1| flagellar basal-body rod protein FlgG2 [Butyrivibrio
           proteoclasticus B316]
 gi|302396423|gb|ADL35328.1| flagellar basal-body rod protein FlgG2 [Butyrivibrio
           proteoclasticus B316]
          Length = 277

 Score =  123 bits (309), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 52/277 (18%), Positives = 100/277 (36%), Gaps = 37/277 (13%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVG----------A 47
           M           +  ++R+  + +N++N +T G++   +    FS+ +            
Sbjct: 1   MVKGLYTAYTGMINEQRRMDVLTNNLANANTNGYKKEGLTARAFSDQLALKIKDYTDAPN 60

Query: 48  IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES------------- 94
               +      V  G+ Y+    G    T    DFA+ G  +FA+E              
Sbjct: 61  TARGLGIINPGVKIGESYVDWSEGPMKETKNTFDFAIGGRGFFAVEYTNKAVNIERDTAG 120

Query: 95  PRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV 154
              ++ TRDG F +  +G + +  G Y + D           +    +   G + Q G V
Sbjct: 121 QMDVMYTRDGCFTMNVNGEITTQDGDYVLDDS--GSHIQLDPNLPVEIDTLGNVIQDGAV 178

Query: 155 IATMGLYSVDMS---------QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNAN 205
           +A +G+Y  + +            +    +   P       E +    V  GFLE SN +
Sbjct: 179 VAKIGVYDFEATTYPDGRISYDNLLHYGENFFIPAGDDAGAEVVENARVYSGFLEQSNVS 238

Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            + EM  MI   + +++   +I   + ++  A   I 
Sbjct: 239 VVDEMVNMIATQRNYDTNQRMITTIDDTLQIAANQIG 275


>gi|218778847|ref|YP_002430165.1| hypothetical protein Dalk_0994 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218760231|gb|ACL02697.1| Putative Flagellar basal-body rod protein FlgG or FlgF
           [Desulfatibacillum alkenivorans AK-01]
          Length = 228

 Score =  123 bits (309), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 46/226 (20%), Positives = 92/226 (40%), Gaps = 19/226 (8%)

Query: 18  RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTG 77
           R   +++N++N  T GF+         + A+  + +                 G    TG
Sbjct: 18  RFEVISNNLANVSTPGFKRD-------IYALDKNSNPYTE--------TDMSEGPVQHTG 62

Query: 78  TELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKD 137
            ELDF+++G+ +F +    G+  TR GRF +  D  +V+A+G   + D       I    
Sbjct: 63  NELDFSIQGEGFFEMLGENGLRYTRQGRFLLNADKEIVNAAGDKLLSDRGDP---IVVDG 119

Query: 138 EIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI-SPNIPPTPLEDLSGVTVKR 196
              ++   G +   GK + T+ + + +  +   +   +   S       LE   G  V +
Sbjct: 120 GDLSLAPDGTLMVDGKELETIAVVNFENPKMLSKEGATYYVSEGGAGERLERPEGTIVNQ 179

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G+LE SN     EM +M+   + + +    ++   +   +A+  + 
Sbjct: 180 GYLEQSNVIVPQEMVKMMESLRTYETFQKYMNTASEMDTKAVSEVG 225


>gi|217031579|ref|ZP_03437084.1| hypothetical protein HPB128_21g137 [Helicobacter pylori B128]
 gi|298736702|ref|YP_003729232.1| flagellar basal-body rod protein FlgG [Helicobacter pylori B8]
 gi|216946779|gb|EEC25375.1| hypothetical protein HPB128_21g137 [Helicobacter pylori B128]
 gi|298355896|emb|CBI66768.1| flagellar basal-body rod protein FlgG [Helicobacter pylori B8]
          Length = 269

 Score =  123 bits (309), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 52/268 (19%), Positives = 98/268 (36%), Gaps = 26/268 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDID---- 53
           MQ  +     A      RL   ++N++N +T GF+        F  +    +  +     
Sbjct: 1   MQNGYYATTGAMATQFNRLDLTSNNLANLNTNGFKRDDAITGDFLRLYQQYREQLPLEDQ 60

Query: 54  ----------QKISFVASGKEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTR 102
                              + Y  + +G+F  T   LDFAL   + +FA+++  G+  TR
Sbjct: 61  TKASAKYLNRNLNRVPVLSEIYTDRSLGAFEGTHNPLDFALTSPNLYFAIQTNEGVAYTR 120

Query: 103 DGRFKVTDDGSLVSASGKYP---VLDMASVPIQIPQKDEIFNVGEKGEISQKGK---VIA 156
           DG F V  DG LV+ +G              I +    EI      G   +  +      
Sbjct: 121 DGHFSVDKDGFLVTLNGFRVLSRSGLNEKGGIMLMPNAEIEVNQNGGITFRDNEAQIQAG 180

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
            + L S    +   +   +  +        +      +++  LE SN N++ EM  +I +
Sbjct: 181 ALALVSFSEPKNLKKIGQNLYTYQGEGV-HQVSDSGALRQYMLEKSNVNAVREMSALIEI 239

Query: 217 TQKFNSITTLIDE-NEKSMLEAIRNIAS 243
            +  +  + ++    +    EAI  +A+
Sbjct: 240 NRFLDMYSKVLKTHQDDMNAEAINKLAT 267


>gi|261341493|ref|ZP_05969351.1| flagellar basal-body rod protein FlgF [Enterobacter cancerogenus
           ATCC 35316]
 gi|288316289|gb|EFC55227.1| flagellar basal-body rod protein FlgF [Enterobacter cancerogenus
           ATCC 35316]
          Length = 243

 Score =  123 bits (309), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 48/245 (19%), Positives = 91/245 (37%), Gaps = 10/245 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       ++       +    A+N++N +T GFR        +   I+ +       V 
Sbjct: 1   MDHLIYTAVSGASRSLAQQQIHANNLANVNTQGFRHDLDN--ALSQQIQGEGYASRFLVQ 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
             +  +    G+   TG +LD A++G    AL S    + TR+G+ +V  +G  ++  G 
Sbjct: 59  QQQGGVDLTPGATRDTGRDLDVAIKGSGLIALVSGNREVYTRNGQIQVGPEGD-LTIDGL 117

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD----MSQGFVRRENSG 176
               D   + +       I + G    +   G V A M +  +      +    +     
Sbjct: 118 PVAGDNGPIVLPPFSSINIADDGVISIVPDDGNVAAPMDVDRIKLVDIPASQLSKDAAGF 177

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           +  N    P      V +  G LE SN +++ EM   I L ++F +   ++   E  +  
Sbjct: 178 MITNANVNPRT--EEVELVSGHLESSNVSAISEMVASIALNRQFEAQIKMMKAAED-LAT 234

Query: 237 AIRNI 241
           A   +
Sbjct: 235 AGNRL 239


>gi|227356000|ref|ZP_03840392.1| flagellar basal-body rod protein [Proteus mirabilis ATCC 29906]
 gi|227163988|gb|EEI48890.1| flagellar basal-body rod protein [Proteus mirabilis ATCC 29906]
          Length = 251

 Score =  123 bits (308), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 80/252 (31%), Gaps = 16/252 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       +       +  + VA+N++N  T GF+        V   I  +     +   
Sbjct: 1   MDHVIYTAMGGARHSMENQAVVANNLANASTPGFKAQLSAMRAV--PINGETLPTRTLTV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLV---- 115
                  +  G+   TG  +D AL  + + A++   G    TR+G  +   DG L+    
Sbjct: 59  ESTPGSDQRQGTMNYTGRPMDVALSDNGYLAVQLEDGTQAYTRNGNIERNADGMLMVQGR 118

Query: 116 ------SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169
                  A    P  +++     I       +  +      + K++       V    G 
Sbjct: 119 LLMGDNGAIEVPPQAEISIANNGIVTAHVPTDPPKMLGQIGRLKMVKPEQNDLVRGDDGL 178

Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
                 G +      P      V V  G LE SN N    M  MI   ++F     +I  
Sbjct: 179 FHLSPQGTARVGETLPA--DDNVKVLAGVLEGSNVNPAEAMVDMIANARRFEMQMKVIHS 236

Query: 230 NEKSMLEAIRNI 241
            + +   A   +
Sbjct: 237 ADDNAQRA-NQL 247


>gi|197285509|ref|YP_002151381.1| flagellar basal-body rod protein [Proteus mirabilis HI4320]
 gi|194682996|emb|CAR43444.1| flagellar basal-body rod protein [Proteus mirabilis HI4320]
          Length = 251

 Score =  123 bits (308), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 81/252 (32%), Gaps = 16/252 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       +       +  + VA+N++N  T GF+        V   I  +     +   
Sbjct: 1   MDHVIYTAMGGARHSMENQAVVANNLANASTPGFKAQLSAMRAV--PINGETLPTRTLTV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLV---- 115
           +      +  G+   TG  +D AL  + + A++   G    TR+G  +   DG L+    
Sbjct: 59  ASTPGSDQRQGTMNYTGRPMDVALSDNGYLAVQLEDGTQAYTRNGNIERNADGMLMVQGR 118

Query: 116 ------SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169
                  A    P  +++     I       +  +      + K++       V    G 
Sbjct: 119 LLMGDNGAIEVPPQAEISIANNGIVTAHVPTDPPKMLGQIGRLKMVKPEQNDLVRGDDGL 178

Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
                 G +      P      V V  G LE SN N    M  MI   ++F     +I  
Sbjct: 179 FHLSPQGTARVGETLPA--DDNVKVLAGVLEGSNVNPAEAMVDMIANARRFEMQMKVIHS 236

Query: 230 NEKSMLEAIRNI 241
            + +   A   +
Sbjct: 237 ADDNAQRA-NQL 247


>gi|91791415|ref|YP_561066.1| protein of unknown function DUF1078-like protein [Shewanella
           denitrificans OS217]
 gi|91713417|gb|ABE53343.1| protein of unknown function DUF1078-like protein [Shewanella
           denitrificans OS217]
          Length = 253

 Score =  123 bits (308), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 46/253 (18%), Positives = 94/253 (37%), Gaps = 12/253 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ----KI 56
           M  +  I  +   A +++L  +A N++N  T G++T ++ F  VV   +++  Q    + 
Sbjct: 1   MIDALYIAESGLDAKQKQLDAIAHNIANVSTPGYKTSQMSFMTVVQEDRDNSGQIVSSQG 60

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLV 115
             V + +  L   VG    TG  LD A+ G  +  +E     ++ +R GR      G L 
Sbjct: 61  LGVMAQQSPLDMSVGKMEQTGRPLDVAINGAGFLEVEQGNGKLLYSRGGRLITDAQGYLS 120

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
           + +G      +   P     +     +        +   I  + L +           N+
Sbjct: 121 TENGLRLTSMLQIPPDAEDVRIATDGMLSAKLPGNEVIEIGQVQLVNFVDMSAIKAVGNN 180

Query: 176 GISPNIPPTPLED------LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
               +                   +++G LE SN +   EM  M+   + +     L+  
Sbjct: 181 LFEVDQEALNTAYYGSVGESGMGVLQQGMLESSNVSMNQEMMNMMMAQRSYQLNARLVQV 240

Query: 230 NEKSMLEAIRNIA 242
           +++ + E + N+ 
Sbjct: 241 SDQIL-ETLNNLR 252


>gi|323703190|ref|ZP_08114843.1| flagellar basal-body rod protein FlgF [Desulfotomaculum nigrificans
           DSM 574]
 gi|323531849|gb|EGB21735.1| flagellar basal-body rod protein FlgF [Desulfotomaculum nigrificans
           DSM 574]
          Length = 257

 Score =  123 bits (308), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 48/256 (18%), Positives = 105/256 (41%), Gaps = 16/256 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVG---------AI 48
           M     I + +    + +L+ +A+N++N  T G++   V    F+  +            
Sbjct: 1   MLRGLYIAMNSMDVQQAKLNNIANNLANLATPGYKKTNVVVDKFAATLQLAVEANGPKGK 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFK 107
           +  I          +       G+   TG+  D AL+G+ +FA+E P G  + TRDG F 
Sbjct: 61  REPIGAGNLGNMVARVSTDFSPGALTETGSPTDLALDGNGFFAVEGPNGEQLYTRDGSFH 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-IATMGLYSVDMS 166
           +  +G+L+++ G   + +   + I   +   +   G       +    +  + L      
Sbjct: 121 LDAEGNLLTSDGYKVLGEGGPITIGDAKHVTVKENGTIVVGQGEEMTEVDKLQLVEFADP 180

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
               + E +  +   P    +  +   V +G+LE +N + + EM  +I  T+ + S   L
Sbjct: 181 SRLQKAEGNYFA--DPQGTGQPAATTRVSQGWLEKANVDPVQEMINIIPATRIYESSQRL 238

Query: 227 IDENEKSMLEAIRNIA 242
           +  +++ + ++I  + 
Sbjct: 239 VQISDELLDKSINQVG 254


>gi|126462483|ref|YP_001043597.1| hypothetical protein Rsph17029_1715 [Rhodobacter sphaeroides ATCC
           17029]
 gi|126104147|gb|ABN76825.1| protein of unknown function DUF1078 domain protein [Rhodobacter
           sphaeroides ATCC 17029]
          Length = 251

 Score =  123 bits (308), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 86/249 (34%), Gaps = 8/249 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTV-ADNMSNTDTVGFRTIKVKFSEV-VGAIKNDIDQKISF 58
           M    +  L +  A  +    + A N++N    GFR       +       +    +   
Sbjct: 1   MDRLIHTALNSL-ANLRDTRVIQAQNLANQTVPGFRRDLTNEGDARFLKALDAASARAFQ 59

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSA 117
              G    S   G    TG  +D A+  + WF ++   G   L+R G  ++T DG L++ 
Sbjct: 60  TERGPHLFSSAPGLLNQTGEPMDVAIAEEGWFFVQPEGGEPALSRRGDLRLTADGRLLNG 119

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM---GLYSVDMSQGF-VRRE 173
           +G+  +          P +  I +   +     +           L +  +  G  +R++
Sbjct: 120 AGEAMLDPAMQPIELPPVRALIVDETGRILYEPQDGPPGQQVEGPLIATTIPDGVTLRKD 179

Query: 174 NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
             G                 V +G LE SN N+M E+   I L + F     +I   ++ 
Sbjct: 180 PDGRIRAGGEPLPPPDQRARVLQGVLEGSNVNTMEELVSSIELQRTFELNLRMISSAKEL 239

Query: 234 MLEAIRNIA 242
                R + 
Sbjct: 240 DESGARLLR 248


>gi|70729005|ref|YP_258739.1| flagellar basal body rod protein FlgF [Pseudomonas fluorescens
           Pf-5]
 gi|68343304|gb|AAY90910.1| flagellar basal-body rod protein FlgF [Pseudomonas fluorescens
           Pf-5]
          Length = 246

 Score =  123 bits (307), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 49/245 (20%), Positives = 95/245 (38%), Gaps = 6/245 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + +             A+N++N  T GF+    +   +   +  D     +F  
Sbjct: 1   MDKYLYVAMTGASQNALAQKAHANNLANISTNGFQRDLEQARAM--PVFGDSFPARAFAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           S +       GS + TG +LD A+ G+ W A++SP       R G   V   G L + +G
Sbjct: 59  SERPATDFSAGSMVETGRDLDVAVSGNGWIAVQSPDGSESYVRTGSLNVDALGVLRAGNG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQK--GKVIATMGLYSVDMSQ-GFVRRENSG 176
              + +   + +   QK E+   G     +     +V+A +    +       + +   G
Sbjct: 119 MPVMGNGGPIAVPPEQKIEVGQDGTISIRAMGEGPRVMAEVDRIKLVNPDIKNLTKGLDG 178

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                   P    + V +  GFLE SN N++ EM  ++ L+++F     +++  ++    
Sbjct: 179 SIKTKDGQPAPADANVQLVSGFLESSNVNAVEEMTAVLALSRQFELHVKMMNSAKEDDQA 238

Query: 237 AIRNI 241
             R +
Sbjct: 239 MARVL 243


>gi|78777302|ref|YP_393617.1| flagellar basal body rod protein [Sulfurimonas denitrificans DSM
           1251]
 gi|78497842|gb|ABB44382.1| Flagellar basal body rod protein [Sulfurimonas denitrificans DSM
           1251]
          Length = 276

 Score =  123 bits (307), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 57/273 (20%), Positives = 104/273 (38%), Gaps = 31/273 (11%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           MQ+ +    A  +    RL T+A+N++N +TVGF+   +   + +   K   D+  +   
Sbjct: 1   MQSGYYSSAAGMVTQFNRLDTIANNLANVNTVGFKEDNLIVGDFMRLYKEARDELPNANH 60

Query: 61  SGK-----------------EYLSKEVGSFISTGTELDFALEGDA-WFALESPRGIILTR 102
           + +                  Y    +G    +   LD AL  +  +F +++P GI LTR
Sbjct: 61  TKEAAQFLNRAMNKAPQVVDAYTDFSLGVMQKSNNSLDMALSKEGLFFLVKTPEGIRLTR 120

Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDE------IFNVGEKGEISQKGKVIA 156
           DG F   D+G LV+  G   +     +  Q    ++      I   G+          + 
Sbjct: 121 DGTFTKDDEGKLVTKQGYEVLPSDYFISKQPIIFNQGDSAIEIDKNGQILTNIPNSMTLN 180

Query: 157 TMGLYSVDMSQG--FVRRENSGISPNIPPTPLE----DLSGVTVKRGFLEDSNANSMYEM 210
            +    +       F+++E  G+        +E          V +GF+E SN N++  M
Sbjct: 181 QLNRLFIAQPDNIDFLKKEGDGLYRYDGAGGVEGLVSFDGSEAVLQGFIEKSNVNAVKMM 240

Query: 211 GQMIHLTQKFNSITTLIDEN-EKSMLEAIRNIA 242
            Q+I   +        +D        +AI  +A
Sbjct: 241 TQLIETNRLVGMYQKAMDTQMNDMNRDAIEKLA 273


>gi|317406200|gb|EFV86449.1| flagellar basal-body rod protein FlgF [Achromobacter xylosoxidans
           C54]
          Length = 253

 Score =  123 bits (307), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 51/247 (20%), Positives = 100/247 (40%), Gaps = 11/247 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       +     + +  + +++NM+N +T GFR     +  V       +  ++S VA
Sbjct: 1   MDRIIYTAMNGAARITEHQAALSNNMANVNTPGFREQIALYRSVPVNDGVSLPTRVSTVA 60

Query: 61  SGKEYLSKEVGSFISTGTELDFAL-EGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119
           S     + E+G+  +TG +LD AL   + W A+++P+G   TR G  +V  +G L ++ G
Sbjct: 61  S-TPRNNFEMGNMQTTGRDLDVALASSNGWIAVQTPQGEAYTRAGSLQVGVNGLLQTSLG 119

Query: 120 KYPVLDMASVPIQIPQ----KDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
           +  + D   +     Q          +   G       ++    +   +  +  +   + 
Sbjct: 120 QPVMSDQNGIIDVPDQAALTITSDGTITAIGAGDAPNNILNLGRIKLANPPEAQLVHGDD 179

Query: 176 GISPNI-----PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
           G+         P  P+     + V  G LE SN N M  M  MI   ++F     ++ + 
Sbjct: 180 GVFRLAPVNGQPAPPVPADPSLRVLSGVLEGSNTNPMAAMVGMIENARRFEQQMQVVQQA 239

Query: 231 EKSMLEA 237
           +++   A
Sbjct: 240 DRNAERA 246


>gi|4378857|gb|AAD19725.1| flagellar basal-body rod protein [Zymomonas mobilis subsp. mobilis
           ZM4]
          Length = 249

 Score =  123 bits (307), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 44/243 (18%), Positives = 84/243 (34%), Gaps = 10/243 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       L+   A  ++    A N+SNT+T GF+      +          +   +  +
Sbjct: 1   MDRLLYTSLSGMRATMRQQIATASNLSNTETPGFKKELSTQAAFW---LRGGNSSRAMAS 57

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
            G      +      TG +LD A+ GD+  A+++       TR G  +VT+ G LV+  G
Sbjct: 58  QGIYSADLQKAEVQQTGRDLDLAMGGDSMIAVQAEDGSEAYTRRGDLQVTNSGVLVNGEG 117

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV------DMSQGFVRRE 173
              V +   + I    K  I   G    I      +    +  +         +  + + 
Sbjct: 118 HPLVGERGPITIGAADKITIDKDGTVYVILPGQNPVQPEAIDQIKLFSPSTQPRNRIAKG 177

Query: 174 NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
             G+   +    L      +V+   LE+SN      +  MI  ++ +     ++    + 
Sbjct: 178 LDGLFRVVDGGTLNRDPAASVQADSLENSNVEPTQALVDMIQASRSYEQSVKMVATARQL 237

Query: 234 MLE 236
              
Sbjct: 238 DES 240


>gi|148546708|ref|YP_001266810.1| flagellar basal body rod protein FlgF [Pseudomonas putida F1]
 gi|148510766|gb|ABQ77626.1| flagellar basal-body rod protein FlgF [Pseudomonas putida F1]
          Length = 246

 Score =  123 bits (307), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 44/246 (17%), Positives = 94/246 (38%), Gaps = 9/246 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + +             A+N++N  T GF+    +   +   +  D     +F  
Sbjct: 1   MDKMLYVAMTGASQNALAQKAHANNLANISTNGFQRDLEQARSM--PVFGDSFPARAFAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           + +       G  + TG +LD  + G+ + A+++P       R G   +   G L + +G
Sbjct: 59  TERPGTDFSEGPMVETGRDLDVTVSGNGFIAVQAPDGSEAYVRTGSLNIDALGVLRTGNG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV---IATMGLYSVDMSQGFVRRENSG 176
              + +   + I   QK E+ + G     S             +  V+     + +   G
Sbjct: 119 MPVLGNGGPIAIPPEQKVEVGSDGTISIRSMGEDPRVMAEVDRIKLVNPDTKGLTKGQDG 178

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN---EKS 233
           +       P +    V V  GFL+ SN N++ EM  ++ L+++F     +++     +++
Sbjct: 179 LIHTSSGQPADADVNVRVVSGFLQGSNVNAVEEMTSVLALSRQFELHVKMMNAAKEGDEA 238

Query: 234 MLEAIR 239
           M   ++
Sbjct: 239 MARVLQ 244


>gi|56551506|ref|YP_162345.1| flagellar basal-body rod protein FlgF [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|241761150|ref|ZP_04759239.1| flagellar basal-body rod protein FlgF [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|260752887|ref|YP_003225780.1| flagellar basal-body rod protein FlgF [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
 gi|56543080|gb|AAV89234.1| flagellar basal-body rod protein FlgF [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|241374769|gb|EER64230.1| flagellar basal-body rod protein FlgF [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|258552250|gb|ACV75196.1| flagellar basal-body rod protein FlgF [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
          Length = 249

 Score =  123 bits (307), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 44/243 (18%), Positives = 84/243 (34%), Gaps = 10/243 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       L+   A  ++    A N+SNT+T GF+      +          +   +  +
Sbjct: 1   MDRLLYTSLSGMRATMRQQIATASNLSNTETPGFKKELSTQAAFW---LRGGNSSRAMAS 57

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
            G      +      TG +LD A+ GD+  A+++       TR G  +VT+ G LV+  G
Sbjct: 58  QGIYSADLQKAEVQQTGRDLDLAMGGDSMIAVQAEDGSEAYTRRGDLQVTNSGVLVNGEG 117

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV------DMSQGFVRRE 173
              V +   + I    K  I   G    I      +    +  +         +  + + 
Sbjct: 118 HPLVGERGPITIGAADKITIDKDGTVYVILPGQNPVQPEAIDQIKLVSPSTQPRNRIAKG 177

Query: 174 NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
             G+   +    L      +V+   LE+SN      +  MI  ++ +     ++    + 
Sbjct: 178 LDGLFRVVDGGTLNRDPAASVQADSLENSNVEPTQALVDMIQASRSYEQSVKMVATARQL 237

Query: 234 MLE 236
              
Sbjct: 238 DES 240


>gi|254712013|ref|ZP_05173824.1| flagellar basal body rod protein FlgG [Brucella ceti M644/93/1]
 gi|254715082|ref|ZP_05176893.1| flagellar basal body rod protein FlgG [Brucella ceti M13/05/1]
 gi|261216792|ref|ZP_05931073.1| flagellar basal-body rod protein FlgG [Brucella ceti M13/05/1]
 gi|261319659|ref|ZP_05958856.1| flagellar basal-body rod protein FlgG [Brucella ceti M644/93/1]
 gi|260921881|gb|EEX88449.1| flagellar basal-body rod protein FlgG [Brucella ceti M13/05/1]
 gi|261292349|gb|EEX95845.1| flagellar basal-body rod protein FlgG [Brucella ceti M644/93/1]
          Length = 241

 Score =  123 bits (307), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 43/222 (19%), Positives = 73/222 (32%), Gaps = 21/222 (9%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55
             +  I      A +  L  +A+N++N +T GF+  + +F++++   +            
Sbjct: 1   MKALTIAATGMNAQQLNLEVIANNIANINTTGFKRARAEFTDLLYQSERTAGVPNQANQA 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                      V +         GSF  TG   D AL G  WF ++SP    + TR G F
Sbjct: 61  IVPEGALVGLGVQTAAVRNLHIQGSFNQTGNPYDVALTGRGWFQIQSPTGETLYTRAGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE-KGEISQKGKVIATMGLYSVDM 165
               DG LV+  G      +   P  I            K +       +  + L +   
Sbjct: 121 NKNADGQLVTLDGNPVEPAITIPPDAIEVTITDTGQVFAKLQDQINQVDLGQLTLANFTN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDS 202
             G      +                      ++K+G+LE S
Sbjct: 181 EAGLEPLGGNLYRETEASGGPLVGVPGDPGYGSIKQGYLEAS 222


>gi|52082162|ref|YP_080953.1| flagellar basal-body rod protein [Bacillus licheniformis ATCC
           14580]
 gi|52787554|ref|YP_093383.1| FlhO [Bacillus licheniformis ATCC 14580]
 gi|319648039|ref|ZP_08002256.1| FlhO protein [Bacillus sp. BT1B_CT2]
 gi|52005373|gb|AAU25315.1| flagellar basal-body rod protein [Bacillus licheniformis ATCC
           14580]
 gi|52350056|gb|AAU42690.1| FlhO [Bacillus licheniformis ATCC 14580]
 gi|317389674|gb|EFV70484.1| FlhO protein [Bacillus sp. BT1B_CT2]
          Length = 279

 Score =  123 bits (307), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 43/280 (15%), Positives = 95/280 (33%), Gaps = 42/280 (15%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIK---VKFSEVVGA---------- 47
           M        +A +  ++R   + +N++N +T G++  +     F E++ +          
Sbjct: 1   MLKGLYTATSAMITQQRRTEMLTNNIANANTPGYKEDQGSIRSFPEMLLSRIESDSFKAG 60

Query: 48  -------IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA------------ 88
                   +  I    + V   +       G   ST    D A+                
Sbjct: 61  SASRSFSTQTPIGSINTGVYMQELKPQFSQGDLQSTNEPTDIAISEAEVPVNGETNDKAA 120

Query: 89  --WFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG 146
             +        +  +R  RF + ++ + ++ +G+  +         I    E F V E G
Sbjct: 121 LFYAVRLENGDVRYSRSSRFSLNEN-NQLTINGRLVLSTENRP---ITVGSENFQVAEDG 176

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISP-NIPPTPLEDLSG---VTVKRGFLEDS 202
            +++ G+ +  + +     ++   R  +      N    P    +     +VK+G  E S
Sbjct: 177 TVTENGQNLGRIDVRIALDTRNLAREGDDLYRTENGEALPSAVGNPEVTYSVKQGMTERS 236

Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           N +      +M    + F +   ++   +KSM +A   I 
Sbjct: 237 NVDVTRAYTEMTAAYRSFEANQKVLQAYDKSMEKAANEIG 276


>gi|172058672|ref|YP_001815132.1| hypothetical protein Exig_2667 [Exiguobacterium sibiricum 255-15]
 gi|171991193|gb|ACB62115.1| protein of unknown function DUF1078 domain protein [Exiguobacterium
           sibiricum 255-15]
          Length = 260

 Score =  122 bits (306), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 49/257 (19%), Positives = 99/257 (38%), Gaps = 26/257 (10%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             S     +    L+++L T   N++N +T G++    +F+E++    N+          
Sbjct: 1   MQSLYTSASTMAQLQKQLDTTGHNLANANTNGYKRRDSQFNELLVRNLNNQPAGLTPGSL 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG--IILTRDGR 105
                 +         E      G+F +TG +LD AL     F            TRDG 
Sbjct: 61  TTPAGLRLGVGGYVANEATRFATGTFQNTGRKLDAALSNPHHFFGVIDADGVTKFTRDGN 120

Query: 106 FKVTDDGS---LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEIS----QKGKVIATM 158
           F+++   +   L++      V++ A+ PI  P       + + G I+     + +V+A +
Sbjct: 121 FELSPQANGQVLLTDDAGRSVINQANEPITFPDDATSIELNKDGNITGVLNGERRVLARI 180

Query: 159 GLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
           G+  +    G +     G+            + +TV  G LE SN +   EM  +  + +
Sbjct: 181 GVADIPN-HGELTDVGGGLYTTAGQYQNATGNPLTV--GTLETSNVDMATEMTNLTQIQR 237

Query: 219 KFNSITTLIDENEKSML 235
            +   +  +  +++ M 
Sbjct: 238 AYQFNSKALTTSDQMMG 254


>gi|290474973|ref|YP_003467857.1| flagellar basal body rod cell-proximal protein [Xenorhabdus
           bovienii SS-2004]
 gi|289174290|emb|CBJ81080.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Xenorhabdus bovienii SS-2004]
          Length = 251

 Score =  122 bits (306), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 45/251 (17%), Positives = 86/251 (34%), Gaps = 11/251 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       + A     +  +  A+N++N  T GF+        V   I+ +     +   
Sbjct: 1   MDHVIYTAMGAARQTLEHQAVTANNLANASTPGFKAQLAALRSV--PIEGETLPTRTLTV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGS-LVSAS 118
           +    +    G    T   LD A+    + A++        TR+G  +++ +G  +V   
Sbjct: 59  ASTPGMDSRQGPMNYTSRPLDVAVGQGGFLAVQLDDGTEAYTRNGGIQMSPEGQLMVQGR 118

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ-GFVRRENSG- 176
                     VP Q                S    ++  +G   +   + G V R + G 
Sbjct: 119 MLMGENGPIDVPPQAELTIAADGAISALIASDPPTLLGQIGKLKIVKPEAGQVVRGDDGL 178

Query: 177 -----ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
                 +       L   + V +  G LE SN N +  M  MI   ++F     +I  ++
Sbjct: 179 FHLTPQAREQQGNELAASTEVKIMPGVLEGSNVNPVESMVNMIANARRFEMQMKVIHSSD 238

Query: 232 KSMLEAIRNIA 242
           ++   A + +A
Sbjct: 239 ENAQRANQILA 249


>gi|77463651|ref|YP_353155.1| flagellar proximal rod protein FlgF [Rhodobacter sphaeroides 2.4.1]
 gi|77388069|gb|ABA79254.1| flagellar proximal rod protein FlgF [Rhodobacter sphaeroides 2.4.1]
          Length = 251

 Score =  122 bits (306), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 86/249 (34%), Gaps = 8/249 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTV-ADNMSNTDTVGFRTIKVKFSEV-VGAIKNDIDQKISF 58
           M    +  L +  A  +    + A N++N    GFR       +       +    +   
Sbjct: 1   MDRLIHTALNSL-ANLRDTRVIQAQNLANQTVPGFRRDLTNEGDARFLKAMDAASARAFQ 59

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSA 117
              G    S   G    TG  +D A+  + WF ++   G   L+R G  ++T DG L++ 
Sbjct: 60  TERGPHLFSSAPGLLNQTGEPMDVAIAEEGWFFVQPEGGEPALSRRGDLRLTADGRLLNG 119

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM---GLYSVDMSQGF-VRRE 173
           +G+  +          P +  I +   +     +           L +  +  G  +R++
Sbjct: 120 AGEAMLDPAMQPIELPPVRALIVDETGRILYEPQDGPPGQQVEGPLIATTIPDGVTLRKD 179

Query: 174 NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
             G                 V +G LE SN N+M E+   I L + F     +I   ++ 
Sbjct: 180 PDGRIRAGGEPLPPPDQRARVLQGVLEGSNVNTMEELVSSIELQRTFELNLRMISSAKEL 239

Query: 234 MLEAIRNIA 242
                R + 
Sbjct: 240 DESGARLLR 248


>gi|258622489|ref|ZP_05717511.1| Flagellar basal-body rod protein flgF [Vibrio mimicus VM573]
 gi|258585189|gb|EEW09916.1| Flagellar basal-body rod protein flgF [Vibrio mimicus VM573]
          Length = 243

 Score =  122 bits (306), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 45/244 (18%), Positives = 91/244 (37%), Gaps = 8/244 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M        +    + +     ++N+SN DT GFR    +       +        + V 
Sbjct: 1   MDNLLFTATSGASRVLKAQHVRSNNLSNADTAGFRADMERAESF--QLYGSGFDGRTMVV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119
           +       + G  I TG  LD A+ G+ +  +E+P+G    TR G  KV   G++     
Sbjct: 59  TNSATTRFDSGDVIKTGRPLDVAIIGEGYLTVEAPQGGEAYTRAGNIKVDAFGAM--TIN 116

Query: 120 KYPVLDMASVP--IQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177
            +PVL  +      +  + +              G  I    L         +++E+  +
Sbjct: 117 GFPVLGESGPMVLPEYQKIEIGERGQVSVIPPGGGAKIEVGTLKLTKPPIDQLQKESDSL 176

Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
             N+   P      V +    +E SN +++ E+  ++ LT+ F     ++    +++ +A
Sbjct: 177 LHNVNGEPFPVDETVQLVPEHVEGSNVSAVDELLSVMSLTRNFEMQVRMMKSA-ETLAQA 235

Query: 238 IRNI 241
              +
Sbjct: 236 GNKL 239


>gi|325927876|ref|ZP_08189100.1| flagellar basal-body rod protein FlgF, proteobacterial [Xanthomonas
           perforans 91-118]
 gi|325541716|gb|EGD13234.1| flagellar basal-body rod protein FlgF, proteobacterial [Xanthomonas
           perforans 91-118]
          Length = 243

 Score =  122 bits (306), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 57/237 (24%), Positives = 94/237 (39%), Gaps = 10/237 (4%)

Query: 9   LAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSK 68
           +    A  Q  STV+ N++N DTVGF+            I+              +   +
Sbjct: 1   MTGARASLQAQSTVSHNLANVDTVGFKAALANTEAF--KIQGKGYPSRIDALHVDQGFDR 58

Query: 69  EVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYPVLDMA 127
             G    TG  LD +L+ D W A++SP      TR+G   +T +G LV+A+G   + +  
Sbjct: 59  SQGHQKVTGNPLDVSLQQDRWLAVQSPDGSEAYTRNGELALTANGQLVTANGHAVLDEGG 118

Query: 128 SVPIQIPQKDEIFNVGEKGEISQKGKVIATMG----LYSVDMSQGFVRRENSGISPNIPP 183
           +     P +           I  +G+   TM     +  VD     + R   G+  N   
Sbjct: 119 NPMTIPPHQAMEIGSDGSISIIPQGEGPQTMAIVGKMKVVDAPADRLTRRPDGLMRNTST 178

Query: 184 TPLEDLSGVT---VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
            P +  +  T   V  G LE SN ++   + +MI L ++F     +I   + +   A
Sbjct: 179 DPAQAFAVATGKTVNSGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNGDDNAQSA 235


>gi|319648038|ref|ZP_08002255.1| FlhP protein [Bacillus sp. BT1B_CT2]
 gi|317389673|gb|EFV70483.1| FlhP protein [Bacillus sp. BT1B_CT2]
          Length = 271

 Score =  122 bits (306), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 51/270 (18%), Positives = 101/270 (37%), Gaps = 35/270 (12%)

Query: 7   IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66
                   L++++  ++ N++NTDT G++     FSE++      +++K + VA+ ++  
Sbjct: 3   TASNTMFELQKQIDNISHNLANTDTTGYKAKNTSFSELIRQQIEQVNEKNNEVAASRKTP 62

Query: 67  S---------------KEVGSFISTGTELDFALEGDA-WFALESPRGIILTRDGRFKV-- 108
                            + GS   TG +LD AL     +F +     +  TRDG F +  
Sbjct: 63  PGLRLGVGAVMTDRLTHKQGSLKETGRDLDIALTSPYQYFQVNVGGEVQYTRDGAFYLTP 122

Query: 109 ---TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEIS-------------QKG 152
                +   +     + VLD     I+  Q+ +   V E G ++               G
Sbjct: 123 AAGNANQMQLVTKEGHAVLDENGNAIRFNQRYKHIKVDESGSVTVSSDNQGEAPLRFNLG 182

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQ 212
            V A       +         +   +  +          +++K+GFLE SN +   EM  
Sbjct: 183 IVRAVKPQALTEEGSNLFSVSDELRATALINLNGAGRQDISLKQGFLESSNVDVSKEMTD 242

Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           +I   + +   +  I   ++ M   I ++ 
Sbjct: 243 LISSQRSYQMNSRAITMGDQMMG-LINSVR 271


>gi|94969949|ref|YP_591997.1| flagellar basal-body rod protein FlgG [Candidatus Koribacter
           versatilis Ellin345]
 gi|94551999|gb|ABF41923.1| flagellar basal-body rod protein FlgG [Candidatus Koribacter
           versatilis Ellin345]
          Length = 244

 Score =  122 bits (306), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 51/247 (20%), Positives = 101/247 (40%), Gaps = 12/247 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND-----IDQK 55
           M T   +  A  +A  Q+L   A +++N +T G+R+ +  F  V+               
Sbjct: 1   MDTGSYVACAGLVARSQQLDLAAQDLANINTSGYRSQRSAFRAVLAKSAGANLTGWSAAV 60

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115
            +F   G+  LS+  G+   TG  LD  LEGD +F +++P G   TR G F+++  G+L 
Sbjct: 61  NNFGTLGETRLSRTPGNLEKTGNPLDLGLEGDGFFVVQTPAGPRYTRRGNFQISSAGALE 120

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
           ++ G      +      +   +    +   G +S  G +   + +     S        S
Sbjct: 121 TSDGY----PVQGSLGTVRVPNGELAISADGTLSVDGAIAGKLKVVQFAPSTQLQAESGS 176

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE-NEKSM 234
             S           +  +V++G +E SN N++    Q++ L +    +   +   + +  
Sbjct: 177 YYSAPAGR--ESPAANTSVRQGMIESSNVNAIASSIQLVTLQRTAEMLQRALTTFHSEFD 234

Query: 235 LEAIRNI 241
             A+ ++
Sbjct: 235 RTAVEDL 241


>gi|311070151|ref|YP_003975074.1| flagellar basal-body rod protein [Bacillus atrophaeus 1942]
 gi|310870668|gb|ADP34143.1| flagellar basal-body rod protein [Bacillus atrophaeus 1942]
          Length = 271

 Score =  122 bits (306), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 44/273 (16%), Positives = 96/273 (35%), Gaps = 35/273 (12%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVV----------GA 47
           M        +A ++ ++R   +++N++N +T G++  +     F +++          G 
Sbjct: 1   MLKGLYTATSAMISQQRRTEMLSNNIANANTSGYKEDQGSMRAFPDMLLSRIEAKSPGGV 60

Query: 48  IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA--------------WFALE 93
            K +I    + V   +       GS  ST    D AL  +               +    
Sbjct: 61  SKKEIGSLNTGVYMQELKPLFTQGSLQSTDQPTDIALVENQLPVNGETNENAALFYPVET 120

Query: 94  SPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK 153
           +   +  ++   F + ++ + ++ +G   +         I   +E F V E G ++  G+
Sbjct: 121 ANGDVRYSKSSTFSLNEN-NQLTINGNPVLSTDGQP---ITVDNENFTVSENGTVTTNGR 176

Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV----TVKRGFLEDSNANSMYE 209
               + +   +  +   R  N   S                  ++K+G  E SN +    
Sbjct: 177 TAGQIDIRMEEDVRNLKRDGNDLYSTADGNDLPSAAGNPEVSYSLKQGLSELSNVDVTSA 236

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
             +M    + F +   +I   +KSM +A   I 
Sbjct: 237 YTEMTEAYRTFEANQKVIQAYDKSMDKAANEIG 269


>gi|221639494|ref|YP_002525756.1| Flagellar proximal rod protein FlgF [Rhodobacter sphaeroides KD131]
 gi|221160275|gb|ACM01255.1| Flagellar proximal rod protein FlgF [Rhodobacter sphaeroides KD131]
          Length = 251

 Score =  122 bits (306), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 86/249 (34%), Gaps = 8/249 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTV-ADNMSNTDTVGFRTIKVKFSEV-VGAIKNDIDQKISF 58
           M    +  L +  A  +    + A N++N    GFR       +       +    +   
Sbjct: 1   MDRLIHTALNSL-ANLRDTRVIQAQNLANQTVPGFRRDLTNEGDARFLKAMDAASARAFQ 59

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSA 117
              G    S   G    TG  +D A+  + WF ++   G   L+R G  ++T DG L++ 
Sbjct: 60  TERGPHLFSSAPGLLNQTGEPMDVAIAEEGWFFVQPEGGEPALSRRGDLRLTADGRLLNG 119

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM---GLYSVDMSQGF-VRRE 173
           +G+  +          P +  I +   +     +           L +  +  G  +R++
Sbjct: 120 AGEAMLDPAMQPIELPPVRALIVDETGRILYEPQDGPPGQQVEGPLIATTIPDGVTLRKD 179

Query: 174 NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
             G                 V +G LE SN N+M E+   I L + F     +I   ++ 
Sbjct: 180 PDGRIRARGEPLPPPDQRARVLQGVLEGSNVNTMEELVSSIELQRTFELNLRMISSAKEL 239

Query: 234 MLEAIRNIA 242
                R + 
Sbjct: 240 DESGARLLR 248


>gi|212709493|ref|ZP_03317621.1| hypothetical protein PROVALCAL_00535 [Providencia alcalifaciens DSM
           30120]
 gi|212687831|gb|EEB47359.1| hypothetical protein PROVALCAL_00535 [Providencia alcalifaciens DSM
           30120]
          Length = 251

 Score =  122 bits (305), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 45/252 (17%), Positives = 80/252 (31%), Gaps = 16/252 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       +       +  S V++N++N  T GF+        V   I  D +Q  + V 
Sbjct: 1   MDHVIYTAMGGARHALENQSIVSNNIANVSTAGFKAQLSAMRAV--PIHGDTEQTRTLVV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGS-----L 114
           +         G    TG  +D AL    + A+         TR+G  +++ DG       
Sbjct: 59  ASTPGADMSQGQLNYTGRPMDVALNDKHFLAVALGDGTEAYTRNGNIQISPDGELMIGER 118

Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-----IATMGLYSVDMSQGF 169
           V       +    +  + I     I  +      +  G++     +       V    G 
Sbjct: 119 VLQGDGGAINVPPNAELTIGNDGTITALLATDPPTMLGQIGRLKVVEAQAQDLVRGEDGL 178

Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
                   + N    P+       V  G +E SN N+   M  MI   + F     +I  
Sbjct: 179 FHLSPQAQAANGNGLPM--SERAIVTSGVIEGSNVNAAEAMVSMIANARHFEMQMKVIRS 236

Query: 230 NEKSMLEAIRNI 241
            +++   A   +
Sbjct: 237 ADENAQRA-NQL 247


>gi|226315011|ref|YP_002774907.1| flagellar basal-body rod protein [Brevibacillus brevis NBRC 100599]
 gi|226097961|dbj|BAH46403.1| flagellar basal-body rod protein [Brevibacillus brevis NBRC 100599]
          Length = 329

 Score =  122 bits (305), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 56/325 (17%), Positives = 100/325 (30%), Gaps = 83/325 (25%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTI---KVKFSEVVGAIKND------ 51
           M        +  LAL+ R  ++A+N++N +T GF+        F E + +  ND      
Sbjct: 1   MIRGLYTSASGMLALQNRQESLANNLANINTPGFKQDVGVMRAFPEQLLSRMNDKEGLDV 60

Query: 52  ------------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE------ 93
                       I +  + V   +   +   G    T    D AL  +            
Sbjct: 61  PGIPTMPGQPAIIGRLNTGVYMSEALPNFAQGDIEETRNPYDLALMDNIQPDQNGNERRL 120

Query: 94  ----------------SPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKD 137
                               I  TR+G + V  DG LV+A G Y +              
Sbjct: 121 FYSVARIEQANLAQPAQQEDIRYTRNGNWSVNSDGYLVTAEGYYVLDSSNQAIRINHDPT 180

Query: 138 EIFNVGEKGEISQKGKVI-------------------ATMGLYSVDMSQGFVRRENS--- 175
              NVG+  +IS++G+++                   A +GL  V   Q  VR   +   
Sbjct: 181 LGTNVGQNLKISERGELMQVTIDPITKAEQYTALPTHARLGLAVVTDPQKLVREGTNVFR 240

Query: 176 ------------------GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217
                                          +     ++G+ E SN +    M  M+ + 
Sbjct: 241 FEGDIAVEGIDLAEANDQAAITAGTYNTPTVVGRFGTQQGWRERSNVDPAQTMTSMMSVL 300

Query: 218 QKFNSITTLIDENEKSMLEAIRNIA 242
           + + +   +I   + ++ +A   I 
Sbjct: 301 RAYEANQRVITTIDGTLEKAANEIG 325


>gi|262173355|ref|ZP_06041032.1| flagellar basal-body rod protein FlgF [Vibrio mimicus MB-451]
 gi|261890713|gb|EEY36700.1| flagellar basal-body rod protein FlgF [Vibrio mimicus MB-451]
          Length = 243

 Score =  122 bits (305), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 43/242 (17%), Positives = 88/242 (36%), Gaps = 4/242 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M        +    + +     ++N+SN DT GFR    +       +        + V 
Sbjct: 1   MDNLLFTATSGASRVLKAQHVRSNNLSNADTAGFRADMERAESF--QLYGSGFDGRTMVV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119
           +       + G  I TG  LD A+ G+ +  +E+P+G    TR G  KV   G++     
Sbjct: 59  TNSATTRFDSGDVIKTGRPLDVAIIGEGYLTVEAPQGGEAYTRAGNIKVDAFGAMTINGF 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                  + V  +  + +              G  I    L         +++E+  +  
Sbjct: 119 PVLGESGSMVLPEYQKIEIGERGQVSVIPPGGGAKIEVGTLKLAKPPIDQLQKESDSLLH 178

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           N+   P      V +    +E SN +++ E+  ++ LT+ F     ++    +++ +A  
Sbjct: 179 NVNGEPFPVDETVQLVPEHVEGSNVSAVDELLSVMSLTRNFEMQVRMMKSA-ETLAQAGN 237

Query: 240 NI 241
            +
Sbjct: 238 KL 239


>gi|188590007|ref|YP_001920227.1| flagellar basal body rod protein FlgG [Clostridium botulinum E3
           str. Alaska E43]
 gi|188500288|gb|ACD53424.1| flagellar hook-basal body complex protein [Clostridium botulinum E3
           str. Alaska E43]
          Length = 257

 Score =  122 bits (305), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 52/259 (20%), Positives = 104/259 (40%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVV----------GA 47
           M   F   ++  + LE    TV +N+ N +  G++   +    F +V+            
Sbjct: 1   MIRGFYTAVSGLITLENEQQTVTNNIVNVNNNGYKKNTLTKQSFEDVLITNRQNKVGDRH 60

Query: 48  IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107
           I N +      V           G+F +T +  DF ++G  +FA++     + TR G FK
Sbjct: 61  IPNKLGNLNFGVKVNDVSTIYTQGAFKATDSYTDFGIDGRGFFAVQRGNERLFTRSGDFK 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGE---ISQKGKVIATMGLYSVD 164
           +   G L++ +G Y +    +   + P           G     S  G+   T+     +
Sbjct: 121 IDQQGYLITGNGDYVLGRNNATGAEEPIYVGKDEFSLDGNNKLQSATGESTYTLLTADFE 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224
             +   +  ++  S N P       + V V++G LE SN N   E+ +++ + ++F +  
Sbjct: 181 DYKSLEKLGDNYYSANNP----IYNAVVNVRQGVLETSNVNPTEELVKLMEIKRQFETNQ 236

Query: 225 TLIDENEKSMLEAIRNIAS 243
             +   ++++ +A   I S
Sbjct: 237 KFVSMQDETVQKAANEIGS 255


>gi|295707198|ref|YP_003600273.1| flagellar hook-basal body complex protein FlhP [Bacillus megaterium
           DSM 319]
 gi|294804857|gb|ADF41923.1| flagellar hook-basal body complex protein FlhP [Bacillus megaterium
           DSM 319]
          Length = 273

 Score =  122 bits (305), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 49/274 (17%), Positives = 96/274 (35%), Gaps = 32/274 (11%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +          L+Q+L  +  N+SNT+T G++     F++++    N+ +       
Sbjct: 1   MNRTMITAANTMGQLQQQLDVIGHNLSNTNTTGYKARDASFNDMLYQQVNNQEDKGTEKR 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL----ESPRGIILTRD 103
                 ++ +     +  L+   GSF +T   LD A+     +      +S + +  TRD
Sbjct: 61  LTPAGIRQGTGAYLDQTSLNMMQGSFQNTDKLLDVAVSNPNVYFQVAVNDSQQPVQYTRD 120

Query: 104 GRFKVTDDG---SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGE---ISQKGKVIAT 157
           G F ++  G     +       VL      I      +   +   G     + KG    T
Sbjct: 121 GSFHISPQGPNNVKLVNGSGQDVLGENGQAIIFSNAFKDIQIDGSGTITVTTNKGVDQFT 180

Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPLEDL--------SGVTVKRGFLEDSNANSMYE 209
           +GL +V   Q    +  +  +                       V++G LE SN +   E
Sbjct: 181 LGLTNVQKPQVLEAKGENLFAFPAEMNQPNMFTDLTGKARETAGVEQGKLEQSNVDLSKE 240

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           +  M    + +   +  I   ++ M   +  I +
Sbjct: 241 LTDMSIAQRAYQFNSRSISIADQMMG-LVNGIRA 273


>gi|37525842|ref|NP_929186.1| flagellar basal-body rod protein FlgF (putative proximal rod
           protein) [Photorhabdus luminescens subsp. laumondii
           TTO1]
 gi|36785271|emb|CAE14212.1| Flagellar basal-body rod protein FlgF (Putative proximal rod
           protein) [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 251

 Score =  122 bits (305), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 79/254 (31%), Gaps = 17/254 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       +       +  +  A+N++N  T GF+        V   ++       + V 
Sbjct: 1   MDHVIYTAMGGARQTLEHQAVTANNLANASTPGFKAQLAALRAV--PVEGAAFNTRTLVV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G    T   LD A+    + A++        TR+G  +++ +G  ++  G
Sbjct: 59  ASTPGSDNRQGPMNYTSRPLDVAIGQGGYLAVQLEDGSEAYTRNGSIQISAEG-QLTVQG 117

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-----------IATMGLYSVDMSQG 168
              + D   + I    +  +   G    +                 +       V    G
Sbjct: 118 NLLMGDNGPINIPPQAELTLATDGSISALIPGDPPTQLGQLGRLKMVKPESDQLVRGDDG 177

Query: 169 FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228
                           P      V +  G LE SN N M  M  MI   ++F     +I 
Sbjct: 178 LFHMTEQAQGLQGDVLPA--SDEVKLMPGVLEGSNVNPMESMVSMIANARRFEMQMKVIH 235

Query: 229 ENEKSMLEAIRNIA 242
            ++++   A + +A
Sbjct: 236 SSDENAQRANQLLA 249


>gi|296447447|ref|ZP_06889372.1| flagellar basal-body rod protein FlgF [Methylosinus trichosporium
           OB3b]
 gi|296255067|gb|EFH02169.1| flagellar basal-body rod protein FlgF [Methylosinus trichosporium
           OB3b]
          Length = 240

 Score =  122 bits (305), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 76/242 (31%), Positives = 136/242 (56%), Gaps = 4/242 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           MQ++F + L+AQL++++R+ T+A+N++N  T G+R   V F  VV     D    +++ +
Sbjct: 1   MQSAFYVSLSAQLSIDKRMETIANNIANAATAGYRADGVSFESVVTKTGADA---VAYAS 57

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           +G++Y+S+  G    TG   D A+   A+FA+ +P G+  TRDGR K+T+ G L +  G 
Sbjct: 58  AGRDYVSRVAGDMQRTGDPFDVAVVRRAFFAIRTPDGVAYTRDGRMKMTETGDLQTV-GG 116

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
           YP+LD  +  + +        +   G I+Q G+ I  +GL+ +D      R   + + P+
Sbjct: 117 YPILDAGNSAVVLDPTAGPPMISRDGMINQAGRQIGAIGLFMIDGDVKLSRGPGASVIPD 176

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
            P T + D     V++G +E +N N + EM ++I  ++ F S++++ D  + S  +AIR 
Sbjct: 177 KPATAVLDFGRNGVEQGVVETANVNPVREMVKLISASRAFESVSSMNDLLDSSQRDAIRT 236

Query: 241 IA 242
           I 
Sbjct: 237 IG 238


>gi|297585402|ref|YP_003701182.1| fagellar hook-basal body protein [Bacillus selenitireducens MLS10]
 gi|297143859|gb|ADI00617.1| fagellar hook-basal body protein [Bacillus selenitireducens MLS10]
          Length = 276

 Score =  122 bits (305), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 44/277 (15%), Positives = 99/277 (35%), Gaps = 36/277 (12%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ------ 54
           M  S          L+++L TV +N++N +T+GF+   V F++++    N++++      
Sbjct: 1   MNQSMINSAVTMGQLQKKLDTVGNNLANVNTIGFKRRDVSFNDLLFQQVNNLNRTEFEGG 60

Query: 55  --------KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI---ILTRD 103
                   + +   +G+  +  + G+   TG +LDFA+    +F   +P        TR+
Sbjct: 61  RDTPLGIRRGTGAIAGQTEIRFDQGAIRETGRDLDFAMTEKGYFFEIAPDEEGNRRFTRE 120

Query: 104 GRFKV------TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV--- 154
           G F          +  +V++ G + +       +     + +  +          +    
Sbjct: 121 GNFYYTPNPADDAENFIVNSQGDFVLGADGEPLVVPVPNEGVTVLNNGTVRVNFAEDEEV 180

Query: 155 -IATMGLYSVDMSQGFVRRENSGISPNI--------PPTPLEDLSGVTVKRGFLEDSNAN 205
            I    + ++   Q       +                   + +    V +  LE SN +
Sbjct: 181 DIGQFQMVNITRPQLLQNVGENNFVFGDLDELGLGFDDVLEDAVGENVVLQRALEMSNVD 240

Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
              EM  MI   + +    + I   ++ M   + N+ 
Sbjct: 241 MSREMTSMIEAQRAYQFNASAIGITDQ-MKGLVTNLR 276


>gi|258625233|ref|ZP_05720145.1| Flagellar basal-body rod protein flgF [Vibrio mimicus VM603]
 gi|258582480|gb|EEW07317.1| Flagellar basal-body rod protein flgF [Vibrio mimicus VM603]
          Length = 243

 Score =  122 bits (305), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 45/244 (18%), Positives = 91/244 (37%), Gaps = 8/244 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M        +    + +     ++N+SN DT GFR    +       +        + V 
Sbjct: 1   MDNLLFTATSGASRVLKAQHVRSNNLSNADTAGFRADMERAESF--QLHGAGFDGRTMVV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119
           +       + G  I TG  LD A+ G+ +  +E+P+G    TR G  KV   G++     
Sbjct: 59  TNSATTRFDSGDVIKTGRPLDVAIIGEGYLTVEAPQGGEAYTRAGNIKVDAFGAM--TIN 116

Query: 120 KYPVLDMASVP--IQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177
            +PVL  +      +  + +              G  I    L         +++E+  +
Sbjct: 117 GFPVLGESGPMVLPEYQKIEIGERGQVSVIPPGGGAKIEVGTLKLTKPPIDQLQKESDSL 176

Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
             N+   P      V +    +E SN +++ E+  ++ LT+ F     ++    +++ +A
Sbjct: 177 LHNVNGEPFPVDETVQLVPEHVEGSNVSAVDELLSVMSLTRNFEMQVRMMKSA-ETLAQA 235

Query: 238 IRNI 241
              +
Sbjct: 236 GNKL 239


>gi|225850286|ref|YP_002730520.1| flagellar basal-body rod protein FlgF [Persephonella marina EX-H1]
 gi|225645268|gb|ACO03454.1| flagellar basal-body rod protein FlgF [Persephonella marina EX-H1]
          Length = 238

 Score =  122 bits (305), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 54/239 (22%), Positives = 105/239 (43%), Gaps = 11/239 (4%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV-KFSEVVGAIKNDIDQKISFVASGK 63
             I  +      ++L T ++N++N +T GF+ + + + S+ +   K +      F     
Sbjct: 8   IYILASGGARAIEQLDTTSNNLANVNTPGFKKLLMREMSQTIPENKGNKKHLFVFPRFQD 67

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPV 123
             +    G+   T   LD A+ G  +F +E+ +G+ LTR G F +  DG +V  +G Y +
Sbjct: 68  TPVILSQGALKKTDNPLDIAIFGSGFFTIETGQGVFLTRSGHFLLNSDGYIVDPNGNYLL 127

Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183
                      ++     V + GEI QKGK +A + + + +  +        G    +P 
Sbjct: 128 --DREGKRIKLEESSGITVNQNGEIFQKGKKVARINIVNYENIRHIGHSYYQGEGQEVP- 184

Query: 184 TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
                 +  ++K+GFLE SN N +  M ++I+  ++F     L+   +    ++   I 
Sbjct: 185 ------ADYSLKQGFLEQSNTNGIEAMIELINAQRRFEIYGNLMRSLDAMEQKS-NEIG 236


>gi|222834411|gb|EEE72888.1| predicted protein [Populus trichocarpa]
          Length = 280

 Score =  122 bits (305), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 54/228 (23%), Positives = 92/228 (40%), Gaps = 13/228 (5%)

Query: 18  RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTG 77
           + + V++N++N  T  F+     +  V   +     Q  +F  +       + G    TG
Sbjct: 51  QQAAVSNNLANASTTAFKAQVNMYRAV--PVVGQETQTRAFTLASTPGADMKAGPLSYTG 108

Query: 78  TELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQK 136
             LD AL+G+ W A++ P      TR G  +V+ DG L ++ G   + D   + I     
Sbjct: 109 RNLDVALQGNGWLAVQMPDGSEAYTRAGSLQVSPDGQLQTSLGLPVMGDGGPIGI---PP 165

Query: 137 DEIFNVGEKGEISQKGKVIATMGLYSV-------DMSQGFVRRENSGISPNIPPTPLEDL 189
               ++G  G ++ +G   A  GL  V          +G  R ++          PL+  
Sbjct: 166 GSTVSIGTDGTVTARGPGEAANGLAQVGKLRVVTPPPEGLARGDDGYFRLRPGVDPLQQD 225

Query: 190 SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
             V V  G LE SN N +  M +MI   ++F     +I   + +   A
Sbjct: 226 PNVRVISGALEGSNVNPVESMVEMIANARRFEMQMKMITGADSNDQRA 273



 Score = 64.1 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 21/48 (43%)

Query: 191 GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
             T++ G +E+SN +   ++  +I   + + +    I   +  M   I
Sbjct: 1   MGTLQSGSVEESNVDLSGQLVNLIVAQRNYQANAQTIKAQDTVMQTLI 48


>gi|291562041|emb|CBL40857.1| fagellar hook-basal body proteins [butyrate-producing bacterium
           SS3/4]
          Length = 265

 Score =  122 bits (305), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 47/266 (17%), Positives = 93/266 (34%), Gaps = 27/266 (10%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---F-SEVVGAIKN------ 50
           M   F    +  L   + L+T+++NM N  T G++   +    F  E++           
Sbjct: 1   MYQGFYNLASGMLTQSRNLNTISNNMVNIQTPGYKNETMVSSTFKEEMLYRTGQYSKENP 60

Query: 51  -DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109
             +        + + Y + + G    T    DFAL G+ +F +++ +GI  TR+G F V 
Sbjct: 61  TQLATVSKIKTAKQVYTNYDQGGLEQTDGIYDFALNGNGFFCIQTSQGIRYTRNGSFSVD 120

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIF-------------NVGEKGEISQKGKVIA 156
            DG LV       +           +   +              +  E G      +   
Sbjct: 121 KDGYLVLNQAGRVLNKEGQPVQIKNENFTVDSKGHITAAITNQSDGEESGSQEVTIEDYG 180

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
           T+ +            +N   S           +  TV+   LE SN + + +M  M+  
Sbjct: 181 TLKVVDFPDQGQLHAEDNGLFSTA---QAETTPADTTVQWKMLEKSNVDMVEQMTAMMSS 237

Query: 217 TQKFNSITTLIDENEKSMLEAIRNIA 242
            +   S    +   ++ M +++ ++ 
Sbjct: 238 QRALQSAAQSLKMYDQIMSKSVSDVG 263


>gi|170722890|ref|YP_001750578.1| flagellar basal body rod protein FlgF [Pseudomonas putida W619]
 gi|169760893|gb|ACA74209.1| flagellar basal-body rod protein FlgF [Pseudomonas putida W619]
          Length = 248

 Score =  122 bits (305), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 45/245 (18%), Positives = 91/245 (37%), Gaps = 9/245 (3%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
                + +             A+N++N  T GF+    +   +   +  D     +F  +
Sbjct: 4   DKMLYVAMTGASQNALAQKAHANNLANISTNGFQRDLEQARSM--PVFGDSFPSRAFAMT 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGK 120
            +       G  + TG +LD A+ G  + A+++P       R G   +   G L + +G 
Sbjct: 62  ERPATDFSEGPMVETGRDLDVAVAGQGFIAVQAPDGSEAYVRTGSLNIDALGVLRAGNGM 121

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV---IATMGLYSVDMSQGFVRRENSGI 177
             + +   + I   QK E+   G     S             +  V+     + +   G+
Sbjct: 122 PVIGNGGPIAIPPEQKVEVGADGTISIRSMGEDPRVMAEVDRIKLVNPDTKGLTKGLDGL 181

Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN---EKSM 234
                  P      V V  GFLE SN N++ EM  ++ L+++F     +++     +++M
Sbjct: 182 IHTTSGQPAAADVNVKVVSGFLEGSNVNAVEEMTSVLALSRQFELHVKMMNAAKEGDEAM 241

Query: 235 LEAIR 239
              ++
Sbjct: 242 ARVLQ 246


>gi|291562042|emb|CBL40858.1| fagellar hook-basal body proteins [butyrate-producing bacterium
           SS3/4]
          Length = 263

 Score =  121 bits (304), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 48/264 (18%), Positives = 97/264 (36%), Gaps = 24/264 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------Q 54
           M  SF  G A      ++LS V++N++N +  GF+     FSE++    ND +      Q
Sbjct: 1   MNMSFYTGAAGAGQFTKKLSVVSNNLANINNTGFKPKTAAFSELIHYNLNDSENAQTELQ 60

Query: 55  KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR---GIILTRDGRFKV--T 109
             S     + +          TG E D+A+     F +        I  TR+G F     
Sbjct: 61  TGSGARVERTWTDFSTAGATQTGKEYDYAIMEPNAFFMIQDPASGEITYTRNGHFHRGER 120

Query: 110 DDGSLVSASGKYPVLDMASVPIQIP-----------QKDEIFNVGEKGEISQKGKVIATM 158
           +DG  ++      VLD    P+++            + ++     +  + ++    +  +
Sbjct: 121 EDGFYLTTEDGKLVLDQNRQPLKLEVTDVEKLQEESESEDDDYDTDDTDSTEDDTDLPKV 180

Query: 159 GLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
            +Y+       +                   S   +++G LE+S  +   EM  +I   +
Sbjct: 181 SVYTFSNPSRLLS-VGDNEYKAQDGMEASLKSDAVLQKGALENSGTDMAKEMVHVIECQR 239

Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242
            F+    +I  ++  +   I ++ 
Sbjct: 240 AFSYAVKMITTSDD-IEGTINSLR 262


>gi|27380938|ref|NP_772467.1| flagellar basal body rod protein FlgF [Bradyrhizobium japonicum
           USDA 110]
 gi|27354104|dbj|BAC51092.1| flagellar basal-body rod protein [Bradyrhizobium japonicum USDA
           110]
          Length = 253

 Score =  121 bits (304), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 55/251 (21%), Positives = 112/251 (44%), Gaps = 11/251 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN-----DIDQK 55
           MQ +  IGL+ Q+ LE+++  +A+N++N +T GF+     F E + +          D++
Sbjct: 1   MQNALLIGLSRQMTLERQMDVIANNVANANTNGFKADHSLFEEFLNSNAREDNFVGSDRR 60

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115
           +S+V     +     G   +T   LD A+ G+A+FA+++      TRDG+F ++  G LV
Sbjct: 61  VSYVQDRGTFRDVGQGPMEATNNPLDMAINGNAFFAVQANGAERYTRDGKFTLSSTGQLV 120

Query: 116 SASGKYPVLDM----ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171
           ++ G   +                      V      ++   +   + + + D      +
Sbjct: 121 TSDGNLVLGTAGPITFQPTDHDINIAPDGTVTVLEGTAKTDSIRGKIRMVTFDDPAKLTK 180

Query: 172 RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
              +    +      +  +  TV++G++E SN NS+ EM +M+ + + + +I  L+ +  
Sbjct: 181 LGANLY--SAGSANQQVDTKSTVQQGYIEKSNVNSVGEMSRMVEVMRSYTAIANLLQQQS 238

Query: 232 KSMLEAIRNIA 242
                AI  +A
Sbjct: 239 DLHKSAIEKLA 249


>gi|293605004|ref|ZP_06687400.1| flagellar basal-body rod protein FlgF [Achromobacter piechaudii
           ATCC 43553]
 gi|292816609|gb|EFF75694.1| flagellar basal-body rod protein FlgF [Achromobacter piechaudii
           ATCC 43553]
          Length = 253

 Score =  121 bits (304), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 52/247 (21%), Positives = 98/247 (39%), Gaps = 11/247 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       +     + ++ + +++NM+N +T GFR     +  V       +  ++S VA
Sbjct: 1   MDRIIYTAMNGAARITEQQAAISNNMANVNTTGFREQIALYRSVPVTDGVSLPTRVSTVA 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDA-WFALESPRGIILTRDGRFKVTDDGSLVSASG 119
           S     S E+G+  +TG +LD AL  +  W A+++P+G   TR G  +V  +G L ++ G
Sbjct: 61  S-TPGNSFEMGNMQTTGRDLDVALSSERGWIAVQTPQGEAYTRGGSLQVGINGLLQTSLG 119

Query: 120 KYPVLDMASVPIQIPQ----KDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
           +  + D         Q          +   G       ++    +   + +   +   + 
Sbjct: 120 QPVLSDQGGPIDVPDQAALTITSDGTITAIGAGDGPNNILNLGRIKLANPNNAQLVHGDD 179

Query: 176 GISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
           G+    P                V  G LE SN N M  M  MI   ++F     +I ++
Sbjct: 180 GVFRLAPVNGQPAPPAPADPSLRVLSGVLEGSNTNPMKAMVGMIENARRFEQQMQVIQQS 239

Query: 231 EKSMLEA 237
           +++   A
Sbjct: 240 DRNAERA 246


>gi|332558507|ref|ZP_08412829.1| FlgF [Rhodobacter sphaeroides WS8N]
 gi|332276219|gb|EGJ21534.1| FlgF [Rhodobacter sphaeroides WS8N]
          Length = 251

 Score =  121 bits (304), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 86/249 (34%), Gaps = 8/249 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTV-ADNMSNTDTVGFRTIKVKFSEV-VGAIKNDIDQKISF 58
           M    +  L +  A  +    + A N++N    GFR       +       +    +   
Sbjct: 1   MDRLIHTALNSL-ANLRDTRVIQAQNLANQTVPGFRRDLTNEGDARFLKAMDAASARAFQ 59

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSA 117
              G    S   G    TG  +D A+  + WF ++   G   L+R G  ++T DG L++ 
Sbjct: 60  TERGPHLFSSAPGLLNQTGEPMDVAIAEEGWFFVQPEGGEPALSRRGDLRLTADGRLLNG 119

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM---GLYSVDMSQGF-VRRE 173
           +G+  +          P +  I +   +     +           L +  +  G  +R++
Sbjct: 120 AGEAMLDPAMQPIELPPVRALIVDETGRILYEPQDGPPGQQVEGPLIATTIPDGVTLRKD 179

Query: 174 NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
             G                 V +G LE SN N+M E+   I L + F     +I   ++ 
Sbjct: 180 PDGRIRAGGEPLPTPDQRARVLQGVLEGSNVNTMEELVSSIELQRTFELNLRMISSAKEL 239

Query: 234 MLEAIRNIA 242
                R + 
Sbjct: 240 DESGARLLR 248


>gi|146341903|ref|YP_001206951.1| flagellar basal body rod protein FlgF [Bradyrhizobium sp. ORS278]
 gi|146194709|emb|CAL78734.1| putative flagellar basal-body rod protein (flgF or flgG)
           [Bradyrhizobium sp. ORS278]
          Length = 254

 Score =  121 bits (304), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 56/251 (22%), Positives = 113/251 (45%), Gaps = 10/251 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN-----DIDQK 55
           M+ +  IGL+ Q+ LE++L  VA+N++N +T GF+  +  F E + +  +        +K
Sbjct: 1   MENALLIGLSRQMVLERQLDVVANNVANVNTNGFKADQQLFEEYLSSGAHEDNFPGAARK 60

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115
           +S+V     Y     GS   TG  LD A+ GD +  +++  G   TRDG   + + G LV
Sbjct: 61  VSYVQDRGTYRDFTQGSTERTGNALDVAISGDGFLTVQTAGGERYTRDGNLHMNNTGQLV 120

Query: 116 SASGKYPVLDM----ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171
           +A+G   +                      V     +++   +   + + S    Q   +
Sbjct: 121 TAAGDLVLGTGGPIVFQPTDHDINISPDGTVTVVEGVNRTDSIRGKLRIVSFADPQKAQK 180

Query: 172 RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
           + N+  +  +     +  +  TV++G++E SN +++ EM +M+ + + +  +  ++    
Sbjct: 181 QGNNLYA-AVGGAAPQQDTKSTVQQGYIEKSNVSAVGEMSKMVEVMRAYTQVANMLQVQS 239

Query: 232 KSMLEAIRNIA 242
                AI  +A
Sbjct: 240 DLRKSAIEKLA 250


>gi|294635611|ref|ZP_06714088.1| flagellar basal-body rod protein FlgF [Edwardsiella tarda ATCC
           23685]
 gi|291091063|gb|EFE23624.1| flagellar basal-body rod protein FlgF [Edwardsiella tarda ATCC
           23685]
          Length = 251

 Score =  121 bits (303), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 48/251 (19%), Positives = 86/251 (34%), Gaps = 14/251 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A+NM+N+ T GFR        V   +  +  +  + V 
Sbjct: 1   MDHAIYTAMGAASQTLNQQAIAANNMANSTTPGFRAQLAALRAV--PVDGESLETRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +        +G    T   LD AL+ D W A++ P      TR+G  ++   G +++A G
Sbjct: 59  ASTPMHDLSMGKLDYTERPLDVALQQDGWLAVQMPDGSEAYTRNGSLQINPQG-MLTAQG 117

Query: 120 KYPVLDMAS---VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
              + D                   +   G   +         L  V  S   V   + G
Sbjct: 118 HLVMGDNGPIAVPDRAQLTIAADGTITALGAGDKPNATTQIGRLKLVKASAQEVVHGDDG 177

Query: 177 ISPNIPPTPLEDLSGV------TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
           +    P    +  + +       V  G LE SN   +  M  MI   ++F     +I   
Sbjct: 178 LFHLTPEAEQQRGAQLPLDPTLKVMPGVLEGSNVQPVEAMVNMITNARRFEMQMKVIRSV 237

Query: 231 EKSMLEAIRNI 241
           + +  +A   +
Sbjct: 238 DDNEQKA-NQL 247


>gi|294501850|ref|YP_003565550.1| flagellar hook-basal body complex protein FlhP [Bacillus megaterium
           QM B1551]
 gi|294351787|gb|ADE72116.1| flagellar hook-basal body complex protein FlhP [Bacillus megaterium
           QM B1551]
          Length = 273

 Score =  121 bits (303), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 47/274 (17%), Positives = 95/274 (34%), Gaps = 32/274 (11%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +          L+Q+L  +  N+SNT+T G++     F++++    N+ +       
Sbjct: 1   MNRTMITAANTMGQLQQQLDVIGHNLSNTNTPGYKARDASFNDMLYQQVNNQEDKGTEKR 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL----ESPRGIILTRD 103
                 ++ +     +  L+   G+F +T   LD A      +      +S + +  TRD
Sbjct: 61  LTPAGIRQGTGAYLDQTSLNMTQGAFQNTDKLLDVAASNPNVYFQVAVNDSQQPVQYTRD 120

Query: 104 GRFKVTDDG---SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGE---ISQKGKVIAT 157
           G F ++ +G     +       VL      I      +   +   G     +  G    T
Sbjct: 121 GSFHLSPEGPNDVKLVNGSGQDVLGENGQAIIFNNAFKDIQIDGSGTITVTTNTGVDQFT 180

Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPLEDL--------SGVTVKRGFLEDSNANSMYE 209
           +GL +V   Q    +  +  +                       V++G LE SN +   E
Sbjct: 181 LGLTNVQKPQVLEAKGENLFAFPAGMNQPNMFTDLTGKARETAGVEQGKLEQSNVDLSKE 240

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           +  M    + +   +  I   ++ M   +  I +
Sbjct: 241 LTDMSIAQRAYQFNSRSISIADQMMG-LVNGIRA 273


>gi|251779966|ref|ZP_04822886.1| flagellar hook-basal body complex protein [Clostridium botulinum E1
           str. 'BoNT E Beluga']
 gi|243084281|gb|EES50171.1| flagellar hook-basal body complex protein [Clostridium botulinum E1
           str. 'BoNT E Beluga']
          Length = 257

 Score =  121 bits (303), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 52/259 (20%), Positives = 105/259 (40%), Gaps = 20/259 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVV----------GA 47
           M   F   ++  + LE    TV +N+ N +  G++   +    F +V+            
Sbjct: 1   MIRGFYTAVSGLITLENEQQTVTNNIVNVNNNGYKKNTLTKQSFEDVLITNRQNKVGDRH 60

Query: 48  IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107
           I N +      V           G+F +T +  DF ++G  +FA++     + TR G FK
Sbjct: 61  IPNKLGNLNFGVKVNDVSTIYTQGAFKATDSYTDFGIDGRGFFAVQRGNERLFTRSGDFK 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGE---ISQKGKVIATMGLYSVD 164
           +   G L++ +G+Y +    +   + P           G     S  G+   T+     +
Sbjct: 121 IDQQGYLITGNGEYVLGRNNATGAEEPIYVGKDEFSLDGNNKLQSATGESTYTLLTADFE 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224
             +   +  ++  S N P       + V V++G LE SN N   E+ +++ + ++F +  
Sbjct: 181 DYKSLEKLGDNYYSANNP----IYNAVVNVRQGVLETSNVNPTEELVKLMEIKRQFETNQ 236

Query: 225 TLIDENEKSMLEAIRNIAS 243
             +   ++++ +A   I S
Sbjct: 237 KFVSMQDETVQKAANEIGS 255


>gi|148256791|ref|YP_001241376.1| flagellar basal body rod protein FlgF [Bradyrhizobium sp. BTAi1]
 gi|146408964|gb|ABQ37470.1| putative flagellar basal-body rod protein (flgF or flgG)
           [Bradyrhizobium sp. BTAi1]
          Length = 254

 Score =  121 bits (303), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 59/251 (23%), Positives = 114/251 (45%), Gaps = 10/251 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN-----DIDQK 55
           M+ +  IGL+ Q+ LE++L  VA+N++N +T GF+  +  F E + +  +        +K
Sbjct: 1   MENALLIGLSRQMVLERQLDVVANNVANVNTNGFKADQQLFEEYLSSKAHEDNFPGASRK 60

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115
           +S+V     Y     GS   TG  LD A+ G+ +  +++  G   TRDG   + + G LV
Sbjct: 61  VSYVQDRGTYRDFSQGSAQHTGNALDVAISGNGFLTVQTAAGERYTRDGNLHMNNLGQLV 120

Query: 116 SASGKYPVLDMA----SVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171
           +A+G   +                      V     +++   +   + L S    Q   +
Sbjct: 121 TAAGDLVLGTGGPIVLQPTDHDINISPDGTVTVVEGVNRTDSIRGKLKLVSFADPQQAQK 180

Query: 172 RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
           + N+  S     TP +  +  TV++G++E SN +++ EM +M+ + + +  +  ++    
Sbjct: 181 QGNNLYSAAGGVTP-QPDTKSTVQQGYIEKSNVSAVGEMSRMVEVMRSYTQVANMLQVQS 239

Query: 232 KSMLEAIRNIA 242
                AI  +A
Sbjct: 240 DMRKNAIEKLA 250


>gi|118588710|ref|ZP_01546118.1| Flagellar basal body rod protein [Stappia aggregata IAM 12614]
 gi|118438696|gb|EAV45329.1| Flagellar basal body rod protein [Stappia aggregata IAM 12614]
          Length = 226

 Score =  121 bits (303), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 52/228 (22%), Positives = 101/228 (44%), Gaps = 12/228 (5%)

Query: 21  TVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-----DQKISFVASGKEYLSKEVGSFIS 75
            +A+NM+N +T GF++  + F+E V  + +       D+ IS+V           G    
Sbjct: 1   MIANNMANINTSGFKSQNLHFAEYVMPVADGSAFEPQDRAISYVDMFTTRTDFTHGPIKM 60

Query: 76  TGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIP 134
           TG E D +L  D +FA++ P      TR G F++   G L+SA G   + D    PI   
Sbjct: 61  TGNEFDLSLNSDGFFAVQMPDGTEAYTRSGAFRLDSTGQLISADGSPVMTD--QGPISFN 118

Query: 135 QKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTV 194
            +D    + + G IS +  +   + +   +  +   +  N+                V +
Sbjct: 119 AEDGRVEIAQDGTISTRLGIRGRIKVVDFEDPRTLEKIGNTMF----KGEDPIPAQEVRM 174

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            +G +E SN   + E+ ++I +T+ ++S   ++ + ++   +AI  + 
Sbjct: 175 VQGAVEGSNVYGITEVTRLIEVTRAYDSTAKIVKDLDELRQQAISTLG 222


>gi|209886824|ref|YP_002290681.1| flagellar basal body rod protein [Oligotropha carboxidovorans OM5]
 gi|209875020|gb|ACI94816.1| flagellar basal body rod protein [Oligotropha carboxidovorans OM5]
          Length = 243

 Score =  121 bits (303), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 6/224 (2%)

Query: 7   IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV--GAIKNDIDQKISFVASGKE 64
           IGLAA +AL + + +VA+N++N  T  F+  +V+F E +      +        + S   
Sbjct: 7   IGLAALIALRRHVDSVANNVANLTTPAFKAGRVQFKEYLTEAEEADSPAMAKRSLVSTSH 66

Query: 65  YLSKEVGSFISTGTELDFALEGDA-WFALESPRGIILTRDGRFKVTDDGSLVSASGKYPV 123
           +    VG   +TG  LD AL  D  +F +++P G   TR G F +  DG L +  GK  +
Sbjct: 67  FTDFSVGGMRTTGNPLDVALTDDDAFFVVDTPGGPRYTRSGAFTLNADGKLATIDGKPVL 126

Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183
              +   + +  +D    +   G IS +   IA + L      +  V+ E  G+      
Sbjct: 127 --TSIGHLVVQPRDGPVTIAGDGSISTRQGRIAGLRLVRFADRRE-VKPEGGGLFSAAHS 183

Query: 184 TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
                     +  G LE SN     EM ++I  +  + ++T ++
Sbjct: 184 PLEVPSGAGRLAIGVLETSNVREADEMSRLIAASNAYETLTKVV 227


>gi|302387773|ref|YP_003823595.1| fagellar hook-basal body protein [Clostridium saccharolyticum WM1]
 gi|302198401|gb|ADL05972.1| fagellar hook-basal body protein [Clostridium saccharolyticum WM1]
          Length = 267

 Score =  121 bits (303), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 52/265 (19%), Positives = 96/265 (36%), Gaps = 23/265 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIK---VKF-SEVVGAIKN------ 50
           M   F    +  L   + L+ +++NM N  T G+++ K     F  E++    N      
Sbjct: 1   MFHGFYNLASGMLYQNRNLNVISNNMVNVSTPGYKSDKLVSTTFKEEMLYRNGNRNKSNP 60

Query: 51  -DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKV 108
            +I       A+     S + G+   TG  LDFAL    +F +E   G    TR+G F++
Sbjct: 61  VEIGTVSMIRAARNTNTSYDQGTLEETGGNLDFALTKPGFFTIEDTNGNRLYTRNGSFRL 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
            D+G L  +S    + +  +          +   G   E+  KG      G  S D    
Sbjct: 121 DDEGYLCLSSMGRVLGEDGNPIELPSDHITVDKSGNIYEVPLKGLGTDEDGGDSEDTEPT 180

Query: 169 FVRRENSGISPN-----------IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217
            + +       +              T     +   ++   +E SN + + EM  M+   
Sbjct: 181 LLGKIGVADFADYTQLVKGDNGTFTTTAEATAANGGIQWKTIERSNIDPIEEMTSMMSSQ 240

Query: 218 QKFNSITTLIDENEKSMLEAIRNIA 242
           +   S   ++   ++ M   + +I 
Sbjct: 241 RASQSAAQVLKMYDQLMSRIVSDIG 265


>gi|167567751|ref|ZP_02360667.1| flagellar basal-body rod protein FlgF [Burkholderia oklahomensis
           EO147]
 gi|167574702|ref|ZP_02367576.1| flagellar basal-body rod protein FlgF [Burkholderia oklahomensis
           C6786]
          Length = 242

 Score =  121 bits (303), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 50/242 (20%), Positives = 80/242 (33%), Gaps = 4/242 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       ++        L   A+N++N  T GFR            +          + 
Sbjct: 1   MDALIYTVMSGAGRALHALEVHANNIANAQTDGFRAELEAART--RPVAGYGYDSRHLIE 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119
                LS + G    T  ELD A++G  +F ++ P G    TR G F++  DG+L     
Sbjct: 59  LQANVLSADAGVVEETDRELDAAIQGRGYFTVQGPNGGNAYTRAGNFQIDADGALTVNGR 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                    V           +      ++   +V A   L  VD     + +  +G+  
Sbjct: 119 PVIGEGGPVVLPDFTSVRIGEDGTLSITVAGDTEVQAVDRLELVDADASELVKNETGLLV 178

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
                PL     V V  G LE SN + + EM   + L + F     L +        A  
Sbjct: 179 PRNGAPLPASDDVRVLGGHLERSNVSPVDEMTSTMALNRAFEVQMRLYNAAGDMAD-AGN 237

Query: 240 NI 241
            +
Sbjct: 238 RL 239


>gi|269138583|ref|YP_003295283.1| flagellar basal-body rod protein [Edwardsiella tarda EIB202]
 gi|267984243|gb|ACY84072.1| flagellar basal-body rod protein [Edwardsiella tarda EIB202]
 gi|304558593|gb|ADM41257.1| Flagellar basal-body rod protein FlgF [Edwardsiella tarda FL6-60]
          Length = 251

 Score =  121 bits (302), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 50/251 (19%), Positives = 85/251 (33%), Gaps = 14/251 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A+NM+N+ T GFR        V   +  +  +  + V 
Sbjct: 1   MDHAIYTAMGAASQTLNQQAIAANNMANSTTPGFRAQLAALRAV--PVDGESVETRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +        +G    T   LD AL+ D W A++ P      TR+G  ++   G ++++ G
Sbjct: 59  ASTPMHDLSMGKLDYTERPLDVALQQDGWLAVQMPDGAEAYTRNGNLQINPQG-MLTSQG 117

Query: 120 KYPVLDMAS---VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
              + D                   +   G   Q         L  V  S   V   + G
Sbjct: 118 HLVMGDNGPIAIPDRAQLTIAADGTITALGAGDQPNATTQIGRLKLVKASAQEVVHGDDG 177

Query: 177 ISPNIP------PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
           +    P         L     V V  G LE SN   +  M  MI   ++F     +I   
Sbjct: 178 MFHLTPEAEQKRGAQLPLDPTVKVMPGVLEGSNVQPVEAMVNMITNARRFEMQMKVIRSV 237

Query: 231 EKSMLEAIRNI 241
           + +  +A   +
Sbjct: 238 DDNEQKA-NQL 247


>gi|12057219|gb|AAF14371.2|AF133240_5 flagellar proximal rod protein FlgF [Rhodobacter sphaeroides]
          Length = 251

 Score =  121 bits (302), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 48/249 (19%), Positives = 86/249 (34%), Gaps = 8/249 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTV-ADNMSNTDTVGFRTIKVKFSEV-VGAIKNDIDQKISF 58
           M    +  L +  A  +    + A N++N    GFR       +       +    +   
Sbjct: 1   MDRLIHTALNSL-ANLRDTRVIQAQNLANQTVPGFRRDLTNEGDARFLKAMDAASARAFQ 59

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSA 117
              G    S   G    TG  +D A+  + WF ++   G   L+R G  ++T DG L++ 
Sbjct: 60  TERGPHLFSSAPGLLNQTGEPMDVAIAEEGWFFVQPEGGEPALSRRGDLRLTADGRLLNG 119

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM---GLYSVDMSQGF-VRRE 173
           +G+  +          P +  I +   +     +           L +  +  G  VR++
Sbjct: 120 AGEAMLDPAMQPIELPPVRALIVDETGRILYEPQDGPPGQQVEGPLIATTIPDGVTVRKD 179

Query: 174 NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
             G                 V +G LE SN N+M E+   I L + F     +I   ++ 
Sbjct: 180 PDGRIRAGGEPLPTPDQRARVLQGVLEGSNVNTMEELVSSIELQRTFELNLRMISSAKEL 239

Query: 234 MLEAIRNIA 242
                R + 
Sbjct: 240 DESGARLLR 248


>gi|302343296|ref|YP_003807825.1| fagellar hook-basal body protein [Desulfarculus baarsii DSM 2075]
 gi|301639909|gb|ADK85231.1| fagellar hook-basal body protein [Desulfarculus baarsii DSM 2075]
          Length = 239

 Score =  121 bits (302), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 86/248 (34%), Gaps = 18/248 (7%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
                 G++   A  +RL+  A+N++N  T G+   +V+ +++ G              +
Sbjct: 3   IDGIAAGISGMNAAVRRLNQSANNLANISTPGYVPSRVEQADLAG-----------GGVA 51

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGK 120
                +   G  +STG  LD A++G  +F L+      + TR G F +  DG LV  +G+
Sbjct: 52  VVGQTALASGPIVSTGNALDLAIDGAGYFVLQDADGNELYTRAGNFSLNADGQLVDQTGR 111

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI-ATMGLYSVDMSQGFVRRENSGISP 179
               +    P    Q     +   +   +    +    + + +     G      +    
Sbjct: 112 LVQAEGFQAPQGTAQIQVGADGVVQALGADDAVLAEGQLQIATFANPGGLRAVGGNAFQA 171

Query: 180 NIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
                P             +  G L+ S  + + EM   I   + F +    I   ++ +
Sbjct: 172 TDASGPAVIDAAGQPGYGAIASGALQTSGTDIVSEMVGQITAQRSFEANLKTIRTGDEML 231

Query: 235 LEAIRNIA 242
              +  + 
Sbjct: 232 GTILDIVG 239


>gi|187478186|ref|YP_786210.1| flagellar basal body rod protein FlgF [Bordetella avium 197N]
 gi|115422772|emb|CAJ49300.1| flagellar basal-body rod protein [Bordetella avium 197N]
          Length = 255

 Score =  121 bits (302), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 56/254 (22%), Positives = 99/254 (38%), Gaps = 12/254 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       +       +  S +++N++N  T GFR     +  V       +  +++  A
Sbjct: 1   MDRVIYTAMNGAARTAEHQSVLSNNLANVSTPGFREQLAMYRSVPVNDGTSLPTRVATAA 60

Query: 61  SGKEYLSKEVGSFISTGTELDFAL-EGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119
           +     +  +G   STG ELD AL  G  WFA+++P+G   TR G  +V  +G L +A+G
Sbjct: 61  T-TPGSNFAMGVMQSTGRELDVALSSGQGWFAIQTPQGEAYTRAGSLQVGVNGLLQTAAG 119

Query: 120 KYPVLDMAS----VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
           +  + D                    +   G       V+    L  V+  Q  + R + 
Sbjct: 120 QPVLSDQNVLIDIPDQAALTIASDGTITALGAGDPPNNVLNMGRLKMVNAPQSQLLRGDD 179

Query: 176 GISPN------IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           G+          P  PL    G  +  G +E SN ++   M  MI   ++F     ++ E
Sbjct: 180 GLFRMPAQANGQPAAPLPADPGQRLIAGVVEGSNVSASGAMVAMIENARRFEMQMQVVSE 239

Query: 230 NEKSMLEAIRNIAS 243
             ++   A   ++S
Sbjct: 240 ANRNAERANSLLSS 253


>gi|146277707|ref|YP_001167866.1| hypothetical protein Rsph17025_1668 [Rhodobacter sphaeroides ATCC
           17025]
 gi|145555948|gb|ABP70561.1| protein of unknown function DUF1078 domain protein [Rhodobacter
           sphaeroides ATCC 17025]
          Length = 251

 Score =  120 bits (301), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 88/249 (35%), Gaps = 8/249 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTV-ADNMSNTDTVGFRTIKVKFSE-VVGAIKNDIDQKISF 58
           M    +  L +  A  +    + A N++N    GFR       +            +   
Sbjct: 1   MDRLIHTALNSL-ANLRDTRVIQAQNLANQTVPGFRRDLTNEGDPRFLKAMETASARAFQ 59

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSA 117
              G    S   G    TG  +D A+  + WF ++   G   L+R G  ++T +G LV+ 
Sbjct: 60  TERGPHLFSSAPGLLNQTGEPMDVAIAEEGWFFVQPEGGEPALSRRGDLRLTAEGQLVNG 119

Query: 118 SG----KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRE 173
           +G       +  +    ++    DE+  +  +      G+ +    + +V      +R++
Sbjct: 120 AGEAMLDQAMQPIELPAVRSLVIDEVGRILYEPMDGAPGEEVEGPVIATVIPEGVALRKD 179

Query: 174 NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
             G                 + +G LE SN N+M E+   I L + F     +I   ++ 
Sbjct: 180 ADGQIRAGDEPLPAPDQRARILQGVLEGSNVNTMEELVSSIELQRTFELNLRMISAAKEL 239

Query: 234 MLEAIRNIA 242
                R + 
Sbjct: 240 DESGARLLR 248


>gi|146305251|ref|YP_001185716.1| flagellar basal-body rod protein FlgF [Pseudomonas mendocina ymp]
 gi|145573452|gb|ABP82984.1| flagellar basal-body rod protein FlgF [Pseudomonas mendocina ymp]
          Length = 243

 Score =  120 bits (301), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 51/243 (20%), Positives = 101/243 (41%), Gaps = 6/243 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       + A       L+  A+N++N +T GFR    +   V  A++           
Sbjct: 1   MDRLGYTAMTAASRTMSSLTVRANNLANVNTPGFRADLEQAQAV--AVEGYGYDSRHLAQ 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASG 119
                +S   G+ ++TG +LD A++G   FA+E        TR+G  +V  D   ++ +G
Sbjct: 59  VKNNGVSLAPGALMATGRDLDVAIQGQGLFAVEGDDGAERYTRNGALQVDAD-LRLTLNG 117

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS-VDMSQGFVRRENSGIS 178
           +  + +   + +       I   G    I +   + A +     VD++ G + ++ SG+ 
Sbjct: 118 RAVLGEGGPIVLPEYDSLHIGRDGTVSVIPRGDFLTAEVDRIRVVDVAAGDLIKDASGLL 177

Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
                 P ED+    +  G+LE SN  ++ ++   + L + F +   ++   E  + EA 
Sbjct: 178 ARSDGQPAEDMEAPVLVSGYLEASNVGAIDQLVATMSLNRLFETQVKMMKAAED-LSEAG 236

Query: 239 RNI 241
             +
Sbjct: 237 NRM 239


>gi|317133467|ref|YP_004092781.1| flagellar hook-basal body protein [Ethanoligenens harbinense
           YUAN-3]
 gi|315471446|gb|ADU28050.1| flagellar hook-basal body protein [Ethanoligenens harbinense
           YUAN-3]
          Length = 239

 Score =  120 bits (301), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 39/250 (15%), Positives = 85/250 (34%), Gaps = 20/250 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE------VVGAIKNDIDQ 54
           M        +  +A   R++ + +N+ N D+ GF++             +       +  
Sbjct: 1   MIRGIFSAASGMIAQSDRINVMGNNLDNADSQGFKSDTATLRSFDEELALRTTDAVPVGT 60

Query: 55  KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGS 113
             + V           G    TG+  + A+ G  +FA+ +P    + TR+G F     G 
Sbjct: 61  LNAGVHVSGVETDLSQGELQQTGSSYNIAVNGGGFFAVAAPGGQTLYTREGDFAPDASGY 120

Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRE 173
           L   SG+  +    +       +                  + T          G   + 
Sbjct: 121 LALPSGQRLLDSTGAPISAAGFRLAANGAYTNDAGQTGTVPLYT----------GTAAKR 170

Query: 174 NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
             G       T  +  +G  + +G++E SN N++ +M  ++  ++ F S     +    +
Sbjct: 171 TDGFF---DLTGAQGATGSVLLQGYVEKSNVNTVTDMTGLMEASRAFQSCQQAYNTGTDT 227

Query: 234 MLEAIRNIAS 243
           + + +  + S
Sbjct: 228 LDKLVTQVGS 237


>gi|218689030|ref|YP_002397242.1| flagellar basal body rod protein FlgF [Escherichia coli ED1a]
 gi|218426594|emb|CAR07422.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli ED1a]
          Length = 251

 Score =  120 bits (301), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 84/252 (33%), Gaps = 16/252 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A+N++N  T GFR        V   ++       + V 
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTANNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G    T   LD AL+ D W A+++       TR+G  +V   G L     
Sbjct: 59  ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
            +PV+  A         +              G    T+        V  +   V+R + 
Sbjct: 117 GHPVVGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176

Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           GI              L+    + V  G LE SN N++  M  MI   ++F     +I  
Sbjct: 177 GIFRLSAESQARRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236

Query: 230 NEKSMLEAIRNI 241
            + +   A   +
Sbjct: 237 VDDNAGRA-NQL 247


>gi|261344141|ref|ZP_05971785.1| flagellar basal-body rod protein FlgF [Providencia rustigianii DSM
           4541]
 gi|282567733|gb|EFB73268.1| flagellar basal-body rod protein FlgF [Providencia rustigianii DSM
           4541]
          Length = 251

 Score =  120 bits (301), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 47/252 (18%), Positives = 81/252 (32%), Gaps = 16/252 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       +       +    V++N++N  T GF+        V   I  D +Q  + V 
Sbjct: 1   MDHVIYTAMGGARHALENQGIVSNNIANVSTAGFKAQLSAMRAV--PIHGDSEQTRTMVV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASG 119
           +         G    TG   D AL    + A+  +      TR+G  +V+ DG L+   G
Sbjct: 59  ASTPGADMSQGPLNYTGKATDVALNDKHFLAVALADGSEAYTRNGNIQVSPDGELM--IG 116

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEI---SQKGKVIATMGLYSV--DMSQGFVRREN 174
              +          P  D              +    ++  +G   V        +R E+
Sbjct: 117 GNLLQGDGGPIDVPPNADLTIGADGTITALLATDPPTMLGQIGRLKVVEAQPNELIRGED 176

Query: 175 -----SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
                S  +       L+      V  G +E SN N+   M  MI   + F     +I  
Sbjct: 177 GLFHLSAQAQAANGNGLQQSGRAIVTSGVIEGSNVNAAEAMVSMIANARHFEMQMKVIHS 236

Query: 230 NEKSMLEAIRNI 241
            +++   A   +
Sbjct: 237 ADENAQRA-NQL 247


>gi|330501138|ref|YP_004378007.1| flagellar basal-body rod protein FlgF [Pseudomonas mendocina NK-01]
 gi|328915424|gb|AEB56255.1| flagellar basal-body rod protein FlgF [Pseudomonas mendocina NK-01]
          Length = 243

 Score =  120 bits (300), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 49/243 (20%), Positives = 98/243 (40%), Gaps = 6/243 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       + A       L+  A+N++N +T GFR    +   V  A++           
Sbjct: 1   MDRLGYTAMTAASRTMSSLTVRANNLANVNTPGFRADLEQAQAV--AVEGYGYDSRHLAR 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASG 119
                ++   G  ++TG +LD A++G   FA+E        TR+G  +V  +   ++ +G
Sbjct: 59  VKNNGVNLAPGELMATGRDLDVAIQGRGLFAVEGDDGAERYTRNGALQVDAE-LRLTLNG 117

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV-DMSQGFVRRENSGIS 178
           +  + +   + +       I   G    I +   V A +    V D+    + ++ SG+ 
Sbjct: 118 RAVLGEGGPIVLPEYDSLHIGRDGTVSVIPRGDFVTAEVDRIRVVDVDAADLTKDASGLL 177

Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
             I   P E L    +  G+LE SN  ++ ++   + L + F +   ++   E  + +A 
Sbjct: 178 TRIDGQPAEGLDAPVLASGYLEASNVGAIDQLVATMSLNRLFETQVKMMKAAED-LSDAG 236

Query: 239 RNI 241
             +
Sbjct: 237 NRM 239


>gi|83717394|ref|YP_438390.1| flagellar basal-body rod protein FlgF [Burkholderia thailandensis
           E264]
 gi|167614838|ref|ZP_02383473.1| flagellar basal-body rod protein FlgF [Burkholderia thailandensis
           Bt4]
 gi|257141423|ref|ZP_05589685.1| flagellar basal-body rod protein FlgF [Burkholderia thailandensis
           E264]
 gi|83651219|gb|ABC35283.1| flagellar basal-body rod protein FlgF [Burkholderia thailandensis
           E264]
          Length = 241

 Score =  120 bits (300), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 49/236 (20%), Positives = 82/236 (34%), Gaps = 2/236 (0%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       ++        ++  A+NM+N  T GFR           A++         ++
Sbjct: 1   MDALIYTVMSGADRTLHGIAVHANNMANAQTDGFRAELEMAES--QAVRGYGYDSRHLLS 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
                L+ E G    TG ELD A+ G  +F +++  G   TR G F++  DG+L      
Sbjct: 59  PRANALNGEAGVVADTGRELDAAINGSGYFTVDTQGGEAYTRAGNFEIDADGALTVNGRP 118

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
                   V  +        +           +V A   L  VD     + +  +G+   
Sbjct: 119 VIGEGGPIVLPEFTSLRIGEDGTISITSPGDTEVQAVERLALVDAPASALVKNEAGLLVA 178

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
               PL     V V  G LE SN + + EM   + L + F     + +   +    
Sbjct: 179 RDGQPLPASDEVKVLGGHLERSNVSPVEEMIATMSLNRAFEVQMRMFNAAGEMADT 234


>gi|330447904|ref|ZP_08311552.1| flagellar basal-body rod protein FlgF [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
 gi|328492095|dbj|GAA06049.1| flagellar basal-body rod protein FlgF [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
          Length = 243

 Score =  120 bits (300), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 44/242 (18%), Positives = 90/242 (37%), Gaps = 4/242 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M +      +    + +     ++N+SN DT GFR    +   +   ++       + V 
Sbjct: 1   MDSFLYTATSGASRVMKAQHVRSNNLSNADTAGFRADMERVQSI--PLQGAGFDGRTMVV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +       + G  I TG  LD A+ GD +F +++       TR G  +V ++G +     
Sbjct: 59  TNSAATRFDAGDVIKTGRALDIAINGDGFFTVQTIVGNEAYTRAGNIRVDEEGMMRVNGF 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                  A V  +    +              G  +    L  VD     +++ + G+  
Sbjct: 119 PLMSEGEALVLPEHQNVEISDKGVVTVVPPGGGAKLEVGQLKLVDPEFTQLQKHSDGLFH 178

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            I          V +  G LE SN +++ E+  ++ LT+ F     ++    +++ +A  
Sbjct: 179 PINDQVFAQDPTVAITAGHLEGSNVSAINELVSVMSLTRNFEMQVRMMKTA-ETLAQAGT 237

Query: 240 NI 241
            +
Sbjct: 238 RL 239


>gi|254460299|ref|ZP_05073715.1| flagellar proximal rod protein FlgF [Rhodobacterales bacterium
           HTCC2083]
 gi|206676888|gb|EDZ41375.1| flagellar proximal rod protein FlgF [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 253

 Score =  120 bits (300), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 42/241 (17%), Positives = 87/241 (36%), Gaps = 8/241 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG-AIKNDIDQKISFV 59
           M  + +I L +   +   L+  + NM+N +  G+R   V   E       ++   ++   
Sbjct: 1   MDRNIHIALNSMRNISSDLTVNSQNMANVNVPGYRADLVVTREAQALQSFDEFRSRVFSR 60

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRFKVTDDGSLVSA 117
                  S E G+  +TG  +D A+ G+ +F +         L+R G F    +  ++  
Sbjct: 61  QGKGTLFSAEQGAMQNTGEPMDAAIRGEGYFMIAPATGGDPALSRRGDFGFDLERFIIDG 120

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV-----DMSQGFVRR 172
           +G   +    +       +  +     + ++   G    T     +            + 
Sbjct: 121 AGSRLLDTDMNPIQLPEARRIVVEETGQIQVELFGAPEGTFVPGPIIATTSAADVKLSKS 180

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            +S I P+      E      + +GFLE SN N++  + + I   +KF      I   ++
Sbjct: 181 IDSHIRPSNGDPLPEPDQRARISQGFLESSNVNTITALVKNIESQRKFEMSVKFISLAQE 240

Query: 233 S 233
            
Sbjct: 241 I 241


>gi|332980933|ref|YP_004462374.1| flagellar hook-basal body protein [Mahella australiensis 50-1 BON]
 gi|332698611|gb|AEE95552.1| flagellar hook-basal body protein [Mahella australiensis 50-1 BON]
          Length = 262

 Score =  120 bits (300), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 46/260 (17%), Positives = 92/260 (35%), Gaps = 18/260 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKND------ 51
           M         A      RL+ +A+N++N +T G++  K+    F +V+ A   +      
Sbjct: 1   MLRGLYNATTAMQVETARLNAIANNIANAETTGYKKDKMVSQSFPDVLVARIGNKAGAVI 60

Query: 52  -----IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGR 105
                I      V   +       G    T    D AL G+ +F L   +     TRDG 
Sbjct: 61  RPFDIIGSINHGVHVDQVKTDWFQGPLQQTDNTTDLALTGNGFFVLRVGQNDYRYTRDGA 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPI--QIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
           F V  DG LV+ +G               +   +           + + +   T+ +   
Sbjct: 121 FAVDADGYLVNQNGYRVQGYDNQNEFVDILVGNERFSVDPAGNIYTDQRQYAGTIAVEDF 180

Query: 164 DM-SQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222
           D       +  ++      P        G  +K+G +E SN +   E+  M+ + + + S
Sbjct: 181 DNRDDALEKAGDNLYVVYDPEQYQSHPVGTGIKQGHIEVSNVDINKEITDMMEVYRHYES 240

Query: 223 ITTLIDENEKSMLEAIRNIA 242
              ++   ++++ + +  + 
Sbjct: 241 AQRIVSMLDQTLDKTVNEVG 260


>gi|238755323|ref|ZP_04616666.1| Flagellar basal-body rod protein flgF [Yersinia ruckeri ATCC 29473]
 gi|238706459|gb|EEP98833.1| Flagellar basal-body rod protein flgF [Yersinia ruckeri ATCC 29473]
          Length = 251

 Score =  120 bits (300), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 84/251 (33%), Gaps = 11/251 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A     ++ +  A+N++N  T GFR        V   I        + V 
Sbjct: 1   MDHAIYTAMGAARQTLEQQAVTANNLANASTPGFRAQLSALRAV--PIDGPSMATRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSA-- 117
           +         G    +G  LD AL+ D + A++ P      TR+G  +V  +G +     
Sbjct: 59  ASTPGADMSQGPMNFSGRPLDVALQQDGFMAVQLPDGTEAYTRNGNIQVAANGQMTVQGY 118

Query: 118 --SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
              G    +D+          D   +    G+       I  + L     ++     +  
Sbjct: 119 PLMGDNGPIDVPPQAEVTIAADGTISALNAGDPPNTIAQIGRLKLVQAQGNELNRGDDGL 178

Query: 176 GISPNIP----PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
                         L +   V V  G LE SN   +  M  MI   ++F     +I   +
Sbjct: 179 FHLTPAALQQRGATLPNDPLVKVMPGVLEGSNVKPVETMVDMIANARRFEMQMKVIHSVD 238

Query: 232 KSMLEAIRNIA 242
           ++   A + +A
Sbjct: 239 ENEQRANQLLA 249


>gi|226225712|ref|YP_002759818.1| flagellar basal-body rod protein FlgF [Gemmatimonas aurantiaca
           T-27]
 gi|226088903|dbj|BAH37348.1| flagellar basal-body rod protein FlgF [Gemmatimonas aurantiaca
           T-27]
          Length = 234

 Score =  120 bits (300), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 53/241 (21%), Positives = 94/241 (39%), Gaps = 16/241 (6%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
               +   +A   LE++   +A+N++N  T GF+     F+ ++G      D  I     
Sbjct: 7   NNGLSSAASALQMLERKQQVLANNLANASTRGFKAE-TTFARMMGNQLAKADTAIDLT-- 63

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
                    G+   T   LD ALEGD +F +++P G    R+G F++  +  L    G  
Sbjct: 64  --------PGTLTETHNSLDLALEGDGFFVVDTPAGERFVRNGNFRLDANRHLTDEQGNP 115

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
            +         I        V   G I+  GK    + +  V           +   P+ 
Sbjct: 116 VL----GENGAISLPQGTIEVDATGLITVNGKPQQRLRVERVASGTDLEHEGGTRFIPDA 171

Query: 182 PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
               +      TVK+GFLE+SN N M  M +M+ +  ++ +    +   +     A+ ++
Sbjct: 172 SRQVIPPTER-TVKQGFLEESNVNPMSAMTEMLTVLHRYGAAQQTLSTIDAVRGIAVTDL 230

Query: 242 A 242
           A
Sbjct: 231 A 231


>gi|330809229|ref|YP_004353691.1| flagellar basal-body rod protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327377337|gb|AEA68687.1| Flagellar basal-body rod protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 236

 Score =  120 bits (300), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 56/225 (24%), Positives = 104/225 (46%), Gaps = 8/225 (3%)

Query: 18  RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTG 77
            L  V+ N++N +TVG++  +  F+ +   +              + ++S + G+   TG
Sbjct: 18  NLKAVSQNVANANTVGYKAERT-FNVMASNVAGPGVAGGLDDIQAQTWISTDGGALQHTG 76

Query: 78  TELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKD 137
              D AL GDAWFA+++P G++L+RDGRF+V   G LVS +G   + D       +   D
Sbjct: 77  RATDLALSGDAWFAIKTPGGVLLSRDGRFQVDKSGYLVSRAGYPVLADD----GPLQVAD 132

Query: 138 EIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRG 197
            +  +   GE+S   + +  + +  VD  Q  +   +   + +   TP        V +G
Sbjct: 133 GVLKIDASGEVSVDDRPVGRLSIVRVDNPQQLLAVGDGLYAASTGITP---AKSFVVHQG 189

Query: 198 FLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            LE SNA    +M +M+ +++   ++   +   +  +   I  I 
Sbjct: 190 LLERSNAAMGTDMVKMMEVSRHVETMQRALSAYDGMLNSGINQIG 234


>gi|157694040|ref|YP_001488502.1| flagellar basal-body rod protein [Bacillus pumilus SAFR-032]
 gi|157682798|gb|ABV63942.1| flagellar basal-body rod protein [Bacillus pumilus SAFR-032]
          Length = 279

 Score =  120 bits (300), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 42/280 (15%), Positives = 92/280 (32%), Gaps = 42/280 (15%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTI---KVKFSEVVG----------- 46
           M        +A +A E+R   +++N++N +T G++        F E++            
Sbjct: 1   MLKGLYTATSAMIAQERRTEMLSNNIANANTPGYKADEGTMRAFPEMLLSRMESGRFQTS 60

Query: 47  -------AIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA----------- 88
                    +  I    +     +       G+  +T    D AL  +            
Sbjct: 61  SGKGFSVPQQTPIGGINTGTYMQELIPQFTQGTLKTTDQTTDVALVENNVPINPETNQKS 120

Query: 89  --WFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG 146
             ++A+ +P G+  T+     +     L         +        I  + E F V   G
Sbjct: 121 ALFYAVNTPEGVRYTKSSSITLNAQNQLTINGRALLSVTGE----PITVQSENFKVNADG 176

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV----TVKRGFLEDS 202
            +S+ G+ +  + +     ++   R  N              ++      T+ +G  E S
Sbjct: 177 TVSENGQNLGQIDVRVAMDTRNLAREGNDLYRTADNQPLPSAVNNGQMSYTLSQGVSELS 236

Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           N +      +M    + F +   ++   +KS+ +A+  I 
Sbjct: 237 NVDVTKSYTEMTTAYRAFETNQKVVQAYDKSLEKAVNEIG 276


>gi|254437478|ref|ZP_05050972.1| hypothetical protein OA307_2348 [Octadecabacter antarcticus 307]
 gi|198252924|gb|EDY77238.1| hypothetical protein OA307_2348 [Octadecabacter antarcticus 307]
          Length = 253

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 49/241 (20%), Positives = 88/241 (36%), Gaps = 8/241 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV-VGAIKNDIDQKISFV 59
           M  + +I L +   L   +   A NM+N +  GFR       E       +    ++   
Sbjct: 1   MDRNIHIALNSMRNLSTEMRVNAQNMANLNVPGFRADLTVTREASFLTSLDQYQSRVYSQ 60

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRFKVTDDGSLVSA 117
            S +   S + GS  STG+E+D A+ G+ +F +E        L+R G     D   LV  
Sbjct: 61  QSQEALFSDDAGSLQSTGSEMDTAIRGNGYFFVEPALGGDAALSRRGDLGFDDGRFLVDG 120

Query: 118 SGKYPVLDM-----ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172
           +G   +             +I  ++      E     +   V   +   S+      ++ 
Sbjct: 121 AGNRLLDTELAPIQMPPTRRIVVEETGQIQMELMGTPEGTLVAGPIIATSMAEGISLIKS 180

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            +  I P+      E      + +GFLE SN N++  + + I   + F      I   ++
Sbjct: 181 PDGHIRPSNNTELPEPDQRARIAQGFLESSNVNTISALIKNIESQRHFEMSVKFIALAKE 240

Query: 233 S 233
            
Sbjct: 241 I 241


>gi|224825778|ref|ZP_03698882.1| flagellar basal-body rod protein FlgF [Lutiella nitroferrum 2002]
 gi|224602002|gb|EEG08181.1| flagellar basal-body rod protein FlgF [Lutiella nitroferrum 2002]
          Length = 241

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 85/241 (35%), Gaps = 3/241 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       ++      +     A+N++N  T GFR      S    A++           
Sbjct: 1   MDALIYTIMSGADRTLKAQQVHANNLANAQTNGFRADIEVASS--QAVRGYGYDARHMTR 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           +    +    G+ + TG +LD AL+GD + A+    G   TR G F V  +G+L      
Sbjct: 59  AEPNAVDHRAGTVVETGRDLDVALQGDGFLAVAVGSGEAYTRAGNFSVDANGALTVNGRP 118

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
                   V     +     +     +   +  +     L  V  +   + ++ +G+  +
Sbjct: 119 VLGDGGPIVLPPYVRVAVAGDGTISIQPPGETAMQVVDRLKLVKPAPEELSKDENGLIVS 178

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
                L     V V+   LE SN +++ EM   + L + F     + +     + EA   
Sbjct: 179 RLGNTLPADETVRVQGEHLEQSNVSAVEEMIATMSLNRGFEMQMKMFNAANDMV-EAGNR 237

Query: 241 I 241
           +
Sbjct: 238 L 238


>gi|126445461|ref|YP_001061247.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           668]
 gi|167725931|ref|ZP_02409167.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           DM98]
 gi|254182893|ref|ZP_04889486.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           1655]
 gi|254299685|ref|ZP_04967134.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           406e]
 gi|126224952|gb|ABN88457.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           668]
 gi|157809369|gb|EDO86539.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           406e]
 gi|184213427|gb|EDU10470.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           1655]
          Length = 241

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 48/241 (19%), Positives = 83/241 (34%), Gaps = 3/241 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       ++        ++  A+NM+N  T GFR            ++         + 
Sbjct: 1   MDALIYTVMSGADRTLHGIAVHANNMANAQTDGFRAELEMAES--QPVRGYGYDSRHLLN 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
                L+ E G  + TG ELD A+ G  +F +++      TR G F++  DG+L      
Sbjct: 59  PRANALNGEAGVVVDTGRELDAAINGGGYFTVDAQGSEAYTRAGNFEIDADGALTVNGRP 118

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
                   V  +        +           +V A   L  VD     + +  +G+   
Sbjct: 119 VIGEGGPIVLPEFTSLRIGEDGTISITSPGDTEVQAVERLALVDAPASALVKNEAGLLVA 178

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
               PL   + V V  G LE SN + + EM   + L + F     + +   +    A   
Sbjct: 179 RDGQPLPASNEVKVLGGHLERSNVSPVEEMIATMSLNRAFEVQMRMFNAAGEMAD-AGNR 237

Query: 241 I 241
           +
Sbjct: 238 L 238


>gi|167576663|ref|ZP_02369537.1| flagellar basal-body rod protein FlgF [Burkholderia thailandensis
           TXDOH]
          Length = 241

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 49/236 (20%), Positives = 82/236 (34%), Gaps = 2/236 (0%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       ++        ++  A+NM+N  T GFR           A++         + 
Sbjct: 1   MDALIYTVMSGADRTLHGIAVHANNMANAQTDGFRAELEMAES--QAVRGYGYDSRHLLN 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
                L+ E G    TG ELD A+ G  +F +++  G   TR G F++  DG+L      
Sbjct: 59  PRANALNGEAGVVADTGRELDAAINGSGYFTVDTQGGEAYTRAGNFEIDADGALTVNGRP 118

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
                   V  +        +           +V A   L  VD     + +  +G+   
Sbjct: 119 VIGEGGPIVLPEFTSLRIGEDGTISITSPGDTEVQAVERLALVDAPASALVKNEAGLLVA 178

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
               PL   + V V  G LE SN + + EM   + L + F     + +   +    
Sbjct: 179 RDGQPLPVSNEVKVLGGHLERSNVSPVEEMIATMSLNRAFEVQMRMFNAAGEMADT 234


>gi|323492337|ref|ZP_08097490.1| flagellar basal body rod protein [Vibrio brasiliensis LMG 20546]
 gi|323313384|gb|EGA66495.1| flagellar basal body rod protein [Vibrio brasiliensis LMG 20546]
          Length = 243

 Score =  119 bits (299), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 40/242 (16%), Positives = 86/242 (35%), Gaps = 4/242 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M +      +    + Q     ++N+SN DT GFR    + S +   ++       + V 
Sbjct: 1   MDSLLFTATSGASRVLQAQHVRSNNLSNADTAGFRADMERVSSI--PLQGSGFDGRTMVV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +       + G  + TG  LD A+ GD +  +++       TR G  KV   G+L     
Sbjct: 59  TNSASTRFDEGDIVKTGRPLDVAVMGDGYLTVQTADGQEAYTRAGNIKVDPFGALSINGF 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                    +     + +              G  +    L  V      + + +  +  
Sbjct: 119 AVLGDGGPLILPDYQKVEISERGRISVVPPGGGAELEVGTLKLVKPETNQLEKHSDSLLH 178

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           ++   P      V +    +E SN +++ E+  ++ LT+ F     ++    +++ +A  
Sbjct: 179 SVDGNPFVADETVQLAPEHIEGSNVSAIDELLNVMSLTRNFEMQVRMMKTA-ETLAQAGN 237

Query: 240 NI 241
            +
Sbjct: 238 KL 239


>gi|227873524|ref|ZP_03991769.1| flagellar basal-body rod protein [Oribacterium sinus F0268]
 gi|227840614|gb|EEJ50999.1| flagellar basal-body rod protein [Oribacterium sinus F0268]
          Length = 256

 Score =  119 bits (299), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 52/256 (20%), Positives = 96/256 (37%), Gaps = 16/256 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKN------- 50
           M   F    +  +   + L+ +++NM N  T G++   +    F E +            
Sbjct: 1   MYQGFYDLASGMITQRRNLNNISNNMVNIQTSGYKKDTMVSSTFKEEMMIRTGKYNKKGP 60

Query: 51  -DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109
            D+       ++ K Y   E GS+  T    D A+ G  +FA+ +P+G   TR G F V 
Sbjct: 61  EDLAVASRIKSASKTYTDYEQGSYELTDGIYDTAISGKGFFAVSTPQGTRYTRGGAFSVN 120

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK---VIATMGLYSVDMS 166
           ++G L  A       +     +       I   G   + +  G    V  T+ +      
Sbjct: 121 ENGVLELAGVGKVQSEEGHDIVLPNDNFAIDPDGSIFDPNSTGNTRTVYGTLKVVDFADY 180

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
               + +N+  S N     L+  +  ++    LE SN N + EM  M+   +   S   +
Sbjct: 181 NALHKEDNNLFSTNQTE--LKKPADSSINWKMLEKSNVNMVDEMTTMMSSQRALQSAAQM 238

Query: 227 IDENEKSMLEAIRNIA 242
           +   +  M +A  ++ 
Sbjct: 239 LRMYDTVMAKASSDVG 254


>gi|253990126|ref|YP_003041482.1| flagellar basal-body rod protein flgf [Photorhabdus asymbiotica
           subsp. asymbiotica ATCC 43949]
 gi|253781576|emb|CAQ84739.1| flagellar basal-body rod protein flgf (putative proximal rod
           protein) [Photorhabdus asymbiotica]
          Length = 251

 Score =  119 bits (299), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 40/251 (15%), Positives = 78/251 (31%), Gaps = 14/251 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       +       +  +  A+N++N  T GF+        V   ++       + V 
Sbjct: 1   MDHVIYTAMGGARQTLEHQAVTANNLANASTPGFKAQLAALRAV--PVEGAAFNTRTLVV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G    T   LD A+    + A++        TR+G  +++ DG  ++  G
Sbjct: 59  ASTPGSDNRQGPMNYTARPLDVAIGQGGYLAVQLEDGSEAYTRNGSIQISADG-QLTVQG 117

Query: 120 KYPV--LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS-- 175
              +       VP Q                     ++  +G   +   +          
Sbjct: 118 NLLMSENGPIDVPPQAELTLAADGSISALVAGDPPTLLGQLGKLKMVKPEDNQLVRGDDG 177

Query: 176 -----GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
                  +  +    L     V +  G LE SN N M  M  MI   ++F     +I  +
Sbjct: 178 LFHMTEQARELQGDVLPASDEVKLMPGTLEGSNVNPMESMVSMIDNARRFEMQMKVIHSS 237

Query: 231 EKSMLEAIRNI 241
           +++   A   +
Sbjct: 238 DENAQRA-NQL 247


>gi|163803170|ref|ZP_02197053.1| putative flagellar basal-body rod protein [Vibrio sp. AND4]
 gi|159173070|gb|EDP57903.1| putative flagellar basal-body rod protein [Vibrio sp. AND4]
          Length = 243

 Score =  119 bits (299), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 43/244 (17%), Positives = 93/244 (38%), Gaps = 8/244 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M +      +    + +     ++N+SN DT GFR    +   V   ++       + V 
Sbjct: 1   MDSLLFTATSGASRVLKAQHVRSNNLSNADTAGFRADMERVRSV--ELQGSGFDGRTMVV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +       + G  + TG  LD A+ G+ + ++E+P      TR G  KV   G++  +  
Sbjct: 59  TNSAATRFDSGDIMKTGRPLDVAIMGEGYLSVETPTGNEAYTRAGNIKVDTFGAM--SIN 116

Query: 120 KYPVLDMASV--PIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177
            +PVL            + +              G  +    L  V      +++E+  +
Sbjct: 117 GFPVLGENGPLVVPDFQKIEISERGRVSVIPPGGGAEVEVGTLKMVKPPFDQLQKESDSL 176

Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
             ++   P      V +    +E SN +++ E+  ++ LT+ F     ++    +++ +A
Sbjct: 177 LHSLDGAPFPADETVQLSPEHIEGSNVSAIDELLSVMSLTRNFEMQVRMMKTA-ETLAQA 235

Query: 238 IRNI 241
              +
Sbjct: 236 GNKL 239


>gi|168699694|ref|ZP_02731971.1| flagellar basal body rod protein [Gemmata obscuriglobus UQM 2246]
          Length = 238

 Score =  119 bits (299), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 48/221 (21%), Positives = 86/221 (38%), Gaps = 7/221 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK--NDIDQKISFVAS 61
                 +A +   ++    A N++++ T G+R   + F  +   I    +    I+   +
Sbjct: 1   GLYSAGSALVIASEQQEVTAHNLAHSTTPGYRERGLVFESLDRHIGHAEEPTGDITGART 60

Query: 62  GKEYLSKEVGSFISTGTELDFAL-EGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
            + Y     G    TG   D A+ E D +F L  P G + TR+G F+V   G LVS +G 
Sbjct: 61  VQAYNDFRPGPIQQTGHPYDLAIGEADRFFVLNGPNGPLYTRNGCFRVDPQGRLVSQAGY 120

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
               D  +V   IP+      +   G I+  G+ + T+ L     ++       +     
Sbjct: 121 ALQTDQGNVT--IPEGTSRVVIASDGSITADGQPLGTVRLARFADTKQLTAAGPTLY--T 176

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221
             P      +   V +G  E SN      M ++I   + ++
Sbjct: 177 ASPQAGRQDAPGRVIQGSREGSNVEPAAAMVRLIIGARYYD 217


>gi|300722681|ref|YP_003711971.1| flagellar basal-body rod cell-proximal protein [Xenorhabdus
           nematophila ATCC 19061]
 gi|297629188|emb|CBJ89784.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Xenorhabdus nematophila ATCC 19061]
          Length = 251

 Score =  119 bits (298), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 81/251 (32%), Gaps = 11/251 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       + A     +  +  A+N++N  T GF+        V   I+ +     +   
Sbjct: 1   MDHVIYTAMGAARQTLEHQAVTANNLANASTSGFKAQLAALRAV--PIEGETLPTRTLTV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGS-LVSAS 118
           +    +    G    T   LD A+    + A++        TR+G  +++ +G  +V   
Sbjct: 59  ASTPGMDSRQGPMNYTSRPLDVAVGQGGFLAVQLEDGTEAYTRNGSIQISPEGQLMVQGR 118

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS--- 175
                     VP Q                S    ++  +G   +   +           
Sbjct: 119 MLMGENGPIDVPPQAELTMAADGAISALIASDPPTLLGQIGKLKIVKPEASQVVRGDDGL 178

Query: 176 ----GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
                 +       L   + V +  G LE SN N +  M  MI   ++F     +I  ++
Sbjct: 179 FHLTPQAQEQVGNELAASTEVKIMPGVLEGSNVNPVESMVNMIANARRFEMQMKVIHSSD 238

Query: 232 KSMLEAIRNIA 242
           ++   A + +A
Sbjct: 239 ENAQRANQILA 249


>gi|291334315|gb|ADD93976.1| hypothetical protein Rsph17025_1668 [uncultured marine bacterium
           MedDCM-OCT-S09-C247]
          Length = 251

 Score =  119 bits (298), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 46/239 (19%), Positives = 88/239 (36%), Gaps = 6/239 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV-KFSEVVGAIKNDIDQKISFV 59
           M       L+A   ++     +A+N++N +  GFR     + +       + +  K+  +
Sbjct: 1   MDRLAQTALSAIRQMQDNKFDLANNLANVNVPGFRKDLPNEGNAGFLKELDKVSAKVLPL 60

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSAS 118
            S +   S E GS  +TG E D A+  + +F ++     + L+R G   V     LV+  
Sbjct: 61  ESDRRLFSNESGSLQNTGLETDVAVLNEGFFYIQPENGQVALSRRGDLGVNAQNQLVNGV 120

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ----GFVRREN 174
           G   + D     +             +  + Q G     +       S       + +  
Sbjct: 121 GDLVLSDGLEPILLPNFTAMSITDIGEVLVQQPGLPDGELTSVGFIGSTTSQLEQLIKSL 180

Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
            G    I  T  +        +G+LE SN N++ E+ + I + ++F     LI +    
Sbjct: 181 DGNIRKIDGTVPDPDQTGKFGQGYLESSNVNAIEELIRNIDMQRQFEINVKLIKKASDL 239


>gi|167905091|ref|ZP_02492296.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           NCTC 13177]
          Length = 241

 Score =  119 bits (298), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 48/241 (19%), Positives = 83/241 (34%), Gaps = 3/241 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       ++        ++  A+NM+N  T GFR            ++         + 
Sbjct: 1   MDALIYTIMSGADRTLHGIAVHANNMANAQTDGFRAELEMAES--QPVRGYGYDSRHLLN 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
                L+ E G  + TG ELD A+ G  +F +++      TR G F++  DG+L      
Sbjct: 59  PRANALNGEAGVVVDTGRELDAAINGGGYFTVDAQGSEAYTRAGNFEIDADGALTVNGRP 118

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
                   V  +        +           +V A   L  VD     + +  +G+   
Sbjct: 119 VIGEGGPIVLPEFTSLRIGEDGTISITSPGDTEVQAVERLALVDAPASALVKNEAGLLVA 178

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
               PL   + V V  G LE SN + + EM   + L + F     + +   +    A   
Sbjct: 179 RDGQPLPASNEVKVLGGHLERSNVSPVEEMIATMSLNRAFEVQMRMFNAAGEMAD-AGNR 237

Query: 241 I 241
           +
Sbjct: 238 L 238


>gi|221311596|ref|ZP_03593443.1| flagellar hook-basal body protein [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221315923|ref|ZP_03597728.1| flagellar hook-basal body protein [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221320836|ref|ZP_03602130.1| flagellar hook-basal body protein [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|1763701|emb|CAB05941.1| flhP [Bacillus subtilis subsp. subtilis str. 168]
          Length = 268

 Score =  119 bits (298), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 51/269 (18%), Positives = 97/269 (36%), Gaps = 28/269 (10%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  S          L+Q++ T++ N+SN++T G++     FSE+V    + +D+K   VA
Sbjct: 1   MLRSMLTASTTLNQLQQQIDTISSNLSNSNTTGYKAKDTNFSELVRQQFDQVDEKNEEVA 60

Query: 61  SGKEYLS--------------KEVGSFISTGTELDFALEGDA-WFALESPRGIILTRDGR 105
             ++                  + GS   T  +LD A      +  +        TRDG 
Sbjct: 61  KARKTPPLAPLVGAMMSSRLVSDQGSIQKTDRDLDIAFTSPYQYLQVNVNGNRQYTRDGA 120

Query: 106 FKV-----TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM-- 158
             V       +   +     YPVLD     + I    +   + + G ++           
Sbjct: 121 LYVTPSAANANQLQLVTGNGYPVLDENGNTVNIDSSMKNITINKNGTLTASDGNAVQRFN 180

Query: 159 -GLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT----VKRGFLEDSNANSMYEMGQM 213
            G+  V+  Q      N+  S +      E          +++G LE SN +   +M  +
Sbjct: 181 LGVVQVNNPQELKSEGNNLFSIDNAAAFEELNGANRQNIGMQQGSLEMSNVDISEQMTDL 240

Query: 214 IHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           I   + +   +  I   ++ +   I ++ 
Sbjct: 241 ITSQRSYQLNSRTITMGDQMLG-LINSVR 268


>gi|168783607|ref|ZP_02808614.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC4076]
 gi|188999091|gb|EDU68077.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC4076]
          Length = 251

 Score =  119 bits (298), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 82/252 (32%), Gaps = 16/252 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   ++       + V 
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G    T   LD AL+ D W A+++       TR+G  +V   G L     
Sbjct: 59  ASTPGADITPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
            +PV+  A         +              G    T+        V  +   V+R + 
Sbjct: 117 GHPVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176

Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           GI              L+    + V  G LE SN N++  M  MI   ++F     +I  
Sbjct: 177 GIFRLSAETQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMTDMIATARRFEMQMKVITT 236

Query: 230 NEKSMLEAIRNI 241
              +   A   +
Sbjct: 237 VNDNPGRA-NQL 247


>gi|77457728|ref|YP_347233.1| flagellar basal body rod protein FlgF [Pseudomonas fluorescens
           Pf0-1]
 gi|77381731|gb|ABA73244.1| flagellar basal-body rod protein [Pseudomonas fluorescens Pf0-1]
          Length = 246

 Score =  119 bits (298), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 46/245 (18%), Positives = 94/245 (38%), Gaps = 6/245 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + +             A+N++N  T GF+    +   +   +  D     +F  
Sbjct: 1   MDKYLYVAMTGASQNALAQKAHANNLANISTNGFQRDLEQARSM--PVFGDSFPARAFAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119
           S +       GS + TG +LD A+ G+ + A+++P G     R G   +   G L + +G
Sbjct: 59  SERPATDFTPGSLVQTGRDLDVAVSGNGFIAVQNPNGGESYVRTGSLNIDALGVLRAGNG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQK--GKVIATMGLYSVDMSQ-GFVRRENSG 176
              + +   + +   Q+ E+   G     +     +V+A +    +       + +   G
Sbjct: 119 MPVMGNGGPIAVPPEQQVEVGEDGTISIRAMGEGPRVMAEVDRIKLVNPDIKNMNKGLDG 178

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                   P    + V +  GFLE SN N++ EM  ++ L ++F     +++  +     
Sbjct: 179 SIYTKDGQPAPADANVKLVSGFLESSNVNAVEEMTSVLALAKQFELHVKMMNTAKDDDQA 238

Query: 237 AIRNI 241
             R +
Sbjct: 239 MARVL 243


>gi|91224198|ref|ZP_01259461.1| putative flagellar basal-body rod protein [Vibrio alginolyticus
           12G01]
 gi|269965645|ref|ZP_06179758.1| Flagellar basal-body rod protein flgF [Vibrio alginolyticus 40B]
 gi|91191109|gb|EAS77375.1| putative flagellar basal-body rod protein [Vibrio alginolyticus
           12G01]
 gi|269829713|gb|EEZ83949.1| Flagellar basal-body rod protein flgF [Vibrio alginolyticus 40B]
          Length = 243

 Score =  119 bits (298), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 46/243 (18%), Positives = 99/243 (40%), Gaps = 6/243 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M +      +    + +     ++N+SN DT GFR    +   V   ++       + V 
Sbjct: 1   MDSLLFTATSGASRVLKAQHVRSNNLSNADTAGFRADMERVRSV--EMQGPGFDGRTMVV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +       + G  + TG  LD A+ G+ + ++E+P      TR G  +V   G  ++ +G
Sbjct: 59  TNSASTRFDAGDIVKTGRPLDVAVMGEGYLSVETPAGNEAYTRAGNIQVDTFG-ALTING 117

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ-GFVRRENSGIS 178
              + D   + +   QK EI   G+   I   G      G   +   +   +++E+  + 
Sbjct: 118 FPVLGDNGPLVVPDYQKIEISERGQVSVIPPGGGAEIVAGTLKLVKPEINQLQKESDSLL 177

Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            ++   P      V +    +E SN +++ E+  ++ LT+ F     ++    +++ +A 
Sbjct: 178 HSVDGVPFAADETVQLSPEHIEGSNVSAIDELVSVMSLTRNFEMQVRMMKTA-ETLAKAG 236

Query: 239 RNI 241
             +
Sbjct: 237 NKL 239


>gi|237755436|ref|ZP_04584061.1| flagellar basal-body rod protein FlgF [Sulfurihydrogenibium
           yellowstonense SS-5]
 gi|237692400|gb|EEP61383.1| flagellar basal-body rod protein FlgF [Sulfurihydrogenibium
           yellowstonense SS-5]
          Length = 236

 Score =  119 bits (298), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 56/239 (23%), Positives = 103/239 (43%), Gaps = 13/239 (5%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV-KFSEVVGAIKNDIDQKISFVASGK 63
             I  +      ++L T  +N++N++T GF+ + + + S+ +   K  +   + F     
Sbjct: 8   IYILASGGERATEQLDTTTNNIANSNTPGFKKLLLREMSQKIPENKGKVGDLLVFPRFMD 67

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPV 123
             +    G  I T   LD A+ GD +F +ES  G   TR+G F +  +G LV  +G Y +
Sbjct: 68  SPVLNFQGPLIKTENNLDLAIVGDGFFTVESAIGRYYTRNGHFSINQEGYLVDVNGAYVL 127

Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183
                   +I  +D  F +  KGEI Q G++   + + ++   Q        G       
Sbjct: 128 ---DENFRRIQIQDSKFQITPKGEIYQNGQITGRIRVVNLQNLQAVGSSYYQGQEQQTTN 184

Query: 184 TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
                     +K+G+LE +N N + EM +MI+  ++F+    L    +  +   +  I 
Sbjct: 185 F--------EIKQGYLEGANLNVVKEMVEMINNHRRFDIYMNLAKSLD-MLEGKVNEIG 234


>gi|255767784|ref|NP_391520.2| flagellar hook-basal body protein [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|254763418|sp|P39753|FLHP_BACSU RecName: Full=Flagellar hook-basal body complex protein flhP
 gi|225185412|emb|CAB15656.2| putative flagellar hook-basal body protein [Bacillus subtilis
           subsp. subtilis str. 168]
          Length = 269

 Score =  119 bits (298), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 51/270 (18%), Positives = 97/270 (35%), Gaps = 29/270 (10%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  S          L+Q++ T++ N+SN++T G++     FSE+V    + +D+K   VA
Sbjct: 1   MLRSMLTASTTLNQLQQQIDTISSNLSNSNTTGYKAKDTNFSELVRQQFDQVDEKNEEVA 60

Query: 61  SGKEYLS---------------KEVGSFISTGTELDFALEGDA-WFALESPRGIILTRDG 104
             ++                   + GS   T  +LD A      +  +        TRDG
Sbjct: 61  KARKTPPGLRLGVGAMMSSRLVSDQGSIQKTDRDLDIAFTSPYQYLQVNVNGNRQYTRDG 120

Query: 105 RFKV-----TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM- 158
              V       +   +     YPVLD     + I    +   + + G ++          
Sbjct: 121 ALYVTPSAANANQLQLVTGNGYPVLDENGNTVNIDSSMKNITINKNGTLTASDGNAVQRF 180

Query: 159 --GLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT----VKRGFLEDSNANSMYEMGQ 212
             G+  V+  Q      N+  S +      E          +++G LE SN +   +M  
Sbjct: 181 NLGVVQVNNPQELKSEGNNLFSIDNAAAFEELNGANRQNIGMQQGSLEMSNVDISEQMTD 240

Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           +I   + +   +  I   ++ +   I ++ 
Sbjct: 241 LITSQRSYQLNSRTITMGDQMLG-LINSVR 269


>gi|194016593|ref|ZP_03055207.1| flagellar hook-basal body complex protein FlhO [Bacillus pumilus
           ATCC 7061]
 gi|194012066|gb|EDW21634.1| flagellar hook-basal body complex protein FlhO [Bacillus pumilus
           ATCC 7061]
          Length = 279

 Score =  119 bits (298), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 42/280 (15%), Positives = 97/280 (34%), Gaps = 42/280 (15%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTI---KVKFSEVVG----------- 46
           M        +A +A E+R   +++N++N +T G++        F E++            
Sbjct: 1   MLKGLYTATSAMIAQERRTEMLSNNIANANTPGYKADEGTMRAFPEMLLSRMESGRFQTS 60

Query: 47  -------AIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA----------- 88
                    +  I    +     +       G+  +T    D AL  +            
Sbjct: 61  SGKGFSVPQQTPIGGINTGTYMQELIPQFTQGTLKTTDQTTDVALVENNVPINPETNQKS 120

Query: 89  --WFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG 146
             ++A+ +P G+  T+     +    + ++ +G+  +         I  + E F V   G
Sbjct: 121 ALFYAVNTPEGVRYTKSSSITMNAQ-NQLTINGRALLSVTGQP---ITVQSENFKVNADG 176

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV----TVKRGFLEDS 202
            +S+ G+ +  + +     ++   R  N              ++      T+ +G  E S
Sbjct: 177 TVSENGQNLGQIDVRVAMDTRNLAREGNDLYRTADNQPLPSAVNNGQMSYTLSQGVSELS 236

Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           N +      +M    + F +   ++   +KS+ +A+  I 
Sbjct: 237 NVDVTKSYTEMTTAYRAFETNQKVVQAYDKSLEKAVNEIG 276


>gi|163784307|ref|ZP_02179217.1| flagellar hook basal-body protein FlgG [Hydrogenivirga sp.
           128-5-R1-1]
 gi|159880425|gb|EDP74019.1| flagellar hook basal-body protein FlgG [Hydrogenivirga sp.
           128-5-R1-1]
          Length = 238

 Score =  119 bits (298), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 51/239 (21%), Positives = 98/239 (41%), Gaps = 11/239 (4%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV-KFSEVVGAIKNDIDQKISFVASGK 63
             I  +      ++L T  +N++N +T GF+ + + + S+ +   +    +   F    K
Sbjct: 8   IYILASGGERALEQLDTTTNNLANVNTPGFKKLLLKEMSQKIPDNQGQSKELFVFPRFEK 67

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPV 123
             +    GS   T   LD A++G+ +F +     I LTR+G FK+   G LV  +   PV
Sbjct: 68  TPVVIAQGSLKKTDRPLDLAIDGEGFFQVRFQNQIFLTRNGHFKLDSTGILVDVNSN-PV 126

Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183
           LD     I++   + +    +         V       S+   Q       S  +P+   
Sbjct: 127 LDTQGKVIKLNSTENVTITKDGSIYQNNELV----AKLSIVNYQSVKPIGESYYAPSSS- 181

Query: 184 TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
              +  +   + +GFLE+SN N +  M ++I+  ++      L+   +    ++I  I 
Sbjct: 182 ---QTNASYEIHQGFLENSNVNPIKAMTELINAQRRMEMYGNLMKALDSVEQKSI-EIG 236


>gi|157371206|ref|YP_001479195.1| flagellar basal body rod protein FlgF [Serratia proteamaculans 568]
 gi|157322970|gb|ABV42067.1| flagellar basal-body rod protein FlgF [Serratia proteamaculans 568]
          Length = 251

 Score =  119 bits (297), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 50/247 (20%), Positives = 87/247 (35%), Gaps = 13/247 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A     ++ S  A+N++N  T GFR        V   +        + V 
Sbjct: 1   MDHAIYTAMGAARQTLEQQSVTANNLANASTPGFRAQLSALRAV--PVDGPSLLTRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119
           +         G+   T   LD AL+ D + A+  P G    TR+G  +++  G  ++  G
Sbjct: 59  ASTPGADMSQGALNYTARPLDVALQQDGFLAVSLPDGGEAYTRNGNLQISSTG-QLTVQG 117

Query: 120 KYPVLDMASVPIQIPQKDEIF---NVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           +  + D   + +    +  I     +           +     L  V      V R + G
Sbjct: 118 RPVMGDGGPIEVPPSAEITIAADGTISALNAGDPPNTLAQIGRLKLVKADAREVTRGDDG 177

Query: 177 ISPNIPPTPLEDLSG------VTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
           +    P T  +  +       V V  G LE SN   M  M  MI   ++F     +I   
Sbjct: 178 LFRLTPETQQQRGNQLPNDPLVRVMPGVLEGSNVKPMETMVDMIANARRFEMQMKVIHSV 237

Query: 231 EKSMLEA 237
           +++   A
Sbjct: 238 DENEQRA 244


>gi|296331269|ref|ZP_06873741.1| flagellar basal body rod protein FlgG [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305676256|ref|YP_003867928.1| putative flagellar hook-basal body protein [Bacillus subtilis
           subsp. spizizenii str. W23]
 gi|296151384|gb|EFG92261.1| flagellar basal body rod protein FlgG [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305414500|gb|ADM39619.1| putative flagellar hook-basal body protein [Bacillus subtilis
           subsp. spizizenii str. W23]
          Length = 269

 Score =  119 bits (297), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 48/270 (17%), Positives = 95/270 (35%), Gaps = 29/270 (10%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  S          L+Q++ T++ N+SN++T G++     FSE+V    + +D+K   VA
Sbjct: 1   MLRSMLTASTTLNQLQQQIDTISSNLSNSNTTGYKAKDTNFSELVRQQFDQVDEKNEEVA 60

Query: 61  SGKEYLS---------------KEVGSFISTGTELDFALEGDA-WFALESPRGIILTRDG 104
             ++                   + GS   T  +LD A      +  +        TRDG
Sbjct: 61  KARKTPPGLRLGVGAMMNSRLVSDQGSIQKTDRDLDIAFTSPYQYLQVNVNGNRQYTRDG 120

Query: 105 RFK-----VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM- 158
                      +   +      PVLD     + I    +   + + G ++          
Sbjct: 121 ALYLTPSVANANQLQLVTGNGNPVLDENGNTVNIDSSMKNITINKNGTLTASDGSAVQRF 180

Query: 159 --GLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT----VKRGFLEDSNANSMYEMGQ 212
             G+  V+  Q      N+  S +      +          +++G LE SN +   +M  
Sbjct: 181 NLGVVQVNNPQELKSEGNNLFSIDNAAAFEQLNGANRQNIGIEQGSLEMSNVDISEQMTD 240

Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           +I   + +   +  I   ++ +   I ++ 
Sbjct: 241 LITSQRSYQLNSRTITMGDQMLG-LINSVR 269


>gi|269960117|ref|ZP_06174493.1| Flagellar basal-body rod protein flgF [Vibrio harveyi 1DA3]
 gi|269835088|gb|EEZ89171.1| Flagellar basal-body rod protein flgF [Vibrio harveyi 1DA3]
          Length = 243

 Score =  119 bits (297), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 89/242 (36%), Gaps = 4/242 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M +      +    + +     ++N+SN DT GFR    +   V   ++       + V 
Sbjct: 1   MDSLLFTATSGASRVLKAQHVRSNNLSNADTAGFRADMERVRSV--ELQGAGFDGRTMVV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +       + G  + TG  LD A+ G+ +  +E+P      TR G  KV   G++     
Sbjct: 59  TNSAATRFDSGDIMKTGRPLDVAIMGEGYLTVETPIGNEAYTRAGNIKVDTFGAMSINGF 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                +   V     + +              G  +    L  V      +++E+  +  
Sbjct: 119 PVVGENGPIVVPDFQKIEISERGRVSVIPPGGGAEVEVGTLKMVKPPINQLQKESDSLLH 178

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           ++   P      V +    +E SN +++ E+  ++ LT+ F     ++    +++ +A  
Sbjct: 179 SVDGVPFPADETVQLSPEHIEGSNVSAIDELLSVMSLTRNFEMQVRMMKTA-ETLAQAGN 237

Query: 240 NI 241
            +
Sbjct: 238 KL 239


>gi|311105936|ref|YP_003978789.1| flagellar basal-body rod protein FlgF [Achromobacter xylosoxidans
           A8]
 gi|310760625|gb|ADP16074.1| flagellar basal-body rod protein FlgF [Achromobacter xylosoxidans
           A8]
          Length = 254

 Score =  119 bits (297), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 51/247 (20%), Positives = 98/247 (39%), Gaps = 11/247 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       +     + +  + +++NM+N +T GFR     +  V       +  ++S VA
Sbjct: 1   MDRIIYTAMNGAARITEHQAALSNNMANVNTAGFREQIALYRSVPVTDGTSLPTRVSTVA 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDA-WFALESPRGIILTRDGRFKVTDDGSLVSASG 119
           S     S ++G+  +TG +LD AL  +  W A+++P+G   TR G  +V  +G L ++ G
Sbjct: 61  S-TPRNSFQMGNMQTTGRDLDVALSSERGWIAVQTPQGEAYTRAGGLQVGINGLLQTSLG 119

Query: 120 KYPVLDMASVPIQIPQ----KDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
           +  + D         Q          +   G       ++    +         +   + 
Sbjct: 120 QPVLSDQGGPIDIPDQAALTITADGTITAIGAGDAPNNILNLGRIKLASPQNDQLVHGDD 179

Query: 176 GISPNI-----PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
           G+         P  P+     + +  G LE SN N M  M  MI   ++F     +I ++
Sbjct: 180 GVFRMAPVNGQPAPPVPADPSLRLLSGVLEGSNTNPMAAMVGMIANARRFEQQMQVIQQS 239

Query: 231 EKSMLEA 237
           +++   A
Sbjct: 240 DRNAERA 246


>gi|270262400|ref|ZP_06190671.1| flagellar basal-body rod protein FlgF [Serratia odorifera 4Rx13]
 gi|270043084|gb|EFA16177.1| flagellar basal-body rod protein FlgF [Serratia odorifera 4Rx13]
          Length = 251

 Score =  119 bits (297), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 51/247 (20%), Positives = 88/247 (35%), Gaps = 13/247 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A     ++ S  A+N++N  T GFR        V   +        + V 
Sbjct: 1   MDHAIYTAMGAARQTLEQQSVTANNLANASTPGFRAQLSALRAV--PVDGPSLPTRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119
           +         G+   T   LD AL+ D + A+  P G    TR+G  +++  G  ++  G
Sbjct: 59  ASTPGADMSQGALNYTARPLDVALQQDGFLAVSLPDGGEAYTRNGNIQISSAG-QLTVQG 117

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEK---GEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           +  + D   + +    +  I   G             +     L  V  +   V R + G
Sbjct: 118 RPLMGDGGPIEVPPSAEITIAADGTISALNAGDPPNTIAQIGRLKLVKANAREVMRGDDG 177

Query: 177 ISPNIP------PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
           +    P         L++   V V  G LE SN   M  M  MI   ++F     +I   
Sbjct: 178 LFRLTPETQQQRGNQLQNDPLVRVMPGVLEGSNVKPMETMVDMIANARRFEMQMKVIHSV 237

Query: 231 EKSMLEA 237
           +++   A
Sbjct: 238 DENEQRA 244


>gi|157160604|ref|YP_001457922.1| flagellar basal body rod protein FlgF [Escherichia coli HS]
 gi|157066284|gb|ABV05539.1| flagellar basal-body rod protein FlgF [Escherichia coli HS]
          Length = 251

 Score =  119 bits (297), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 84/252 (33%), Gaps = 16/252 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   ++       + V 
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G    T   LD AL+ D W A+++       TR+G  +V   G L     
Sbjct: 59  ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
            +PV+  A         +              G  + T+        V  +   V+R + 
Sbjct: 117 GHPVIGEAGPIAVPEGAEITIAADGTISALNPGDPVNTVAPVGRLKLVKATGSEVQRGDD 176

Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           GI              L+    + V  G LE SN N++  M  MI   ++F     +I  
Sbjct: 177 GIFRLSAESQATRGPILQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236

Query: 230 NEKSMLEAIRNI 241
            + +   A   +
Sbjct: 237 VDDNAGRA-NQL 247


>gi|163789629|ref|ZP_02184067.1| flagellar hook-basal body complex protein [Carnobacterium sp. AT7]
 gi|159875161|gb|EDP69227.1| flagellar hook-basal body complex protein [Carnobacterium sp. AT7]
          Length = 252

 Score =  119 bits (297), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 43/256 (16%), Positives = 99/256 (38%), Gaps = 20/256 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV------------VGAI 48
           M  S      +   L+++   ++ N++N +T G+++ ++  S              +   
Sbjct: 1   MIRSLTTLSNSINILQKKQENISANVANINTSGYKSQEIIQSTRASEMMSNHLGGPLLNQ 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFK 107
           + DI          +   +   G   +T +  D A++GD +F +E+       TR+G F 
Sbjct: 61  QQDIGGFTFGSQIDEIVQNFNQGGLKATASTTDVAIQGDGFFTVEAANGETSYTRNGNFN 120

Query: 108 VTDDGSLVSASGKYPVL-DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           V D G LV+  G   +          I      F +  +G I+  G  +    + + D +
Sbjct: 121 VNDAGELVTQEGYRVLGVTANGQAAPIQVDGADFTIDARGTIAGTGMSL---MITNFDDT 177

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
            G  R  ++  +                   +LE SN  ++ E+  ++ +++ F +    
Sbjct: 178 AGLTRVGDTLFTGQGGTVQTGGTVVQQ---SYLETSNVETVDEITNLMQVSRAFEANQKA 234

Query: 227 IDENEKSMLEAIRNIA 242
           +   ++++ +A+  + 
Sbjct: 235 LSAADETLRKAVNEVG 250


>gi|321313186|ref|YP_004205473.1| flagellar basal body rod protein FlgG [Bacillus subtilis BSn5]
 gi|291486214|dbj|BAI87289.1| flagellar hook-basal body protein [Bacillus subtilis subsp. natto
           BEST195]
 gi|320019460|gb|ADV94446.1| flagellar basal body rod protein FlgG [Bacillus subtilis BSn5]
          Length = 269

 Score =  119 bits (297), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 51/270 (18%), Positives = 97/270 (35%), Gaps = 29/270 (10%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  S          L+Q++ T++ N+SN++T G++     FSE+V    + +D+K   VA
Sbjct: 1   MLRSMLTASTTLNQLQQQIDTISSNLSNSNTTGYKAKDTNFSELVRQQFDQVDEKNEEVA 60

Query: 61  SGKEYLS---------------KEVGSFISTGTELDFALEGDA-WFALESPRGIILTRDG 104
             ++                   + GS   T  +LD A      +  +        TRDG
Sbjct: 61  KARKTPPGLRLGVGAMMNSRLVSDQGSIQKTDRDLDIAFTSPYQYLQVNVNGNRQYTRDG 120

Query: 105 RFKV-----TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM- 158
              V       +   +     YPVLD     + I    +   + + G ++          
Sbjct: 121 ALYVTPSAANANQLQLVTGNGYPVLDENGNTVNIDSSMKNITINKNGTLTASDGNAVQRF 180

Query: 159 --GLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT----VKRGFLEDSNANSMYEMGQ 212
             G+  V+  Q      N+  S +      E          +++G LE SN +   +M  
Sbjct: 181 NLGVVQVNNPQELKSEGNNLFSIDNAAAFEELNGANRQNIGMQQGSLEMSNVDISEQMTD 240

Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           +I   + +   +  I   ++ +   I ++ 
Sbjct: 241 LITSQRSYQLNSRTITMGDQMLG-LINSVR 269


>gi|260779346|ref|ZP_05888238.1| flagellar basal-body rod protein FlgF [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260605510|gb|EEX31805.1| flagellar basal-body rod protein FlgF [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 243

 Score =  118 bits (296), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 89/242 (36%), Gaps = 4/242 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M +      +    + +     ++N+SN DT GFR    + S V   ++       + V 
Sbjct: 1   MDSLLFTATSGASRVLKAQHVRSNNLSNADTAGFRADMERVSSV--QLQGSGFDGRTMVV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +       + G  + TG  LD A+ G+ +  +++       TR G  KV   G+L     
Sbjct: 59  TNSASTRFDEGDIVKTGRALDVAVMGEGYLTVQTADGQEAYTRAGNIKVDPFGALSINGF 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                    V     + +              G  +    L  V      +++E+  +  
Sbjct: 119 AVIGEGGPLVLPDYQKVEISERGRISVVPPGGGAELEVGTLKLVKPETNQLQKESDSLLH 178

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           ++   P E    V +    +E SN +++ E+  ++ LT+ F     ++    +++ +A  
Sbjct: 179 SVDGNPFEVDQTVQLAPEHIEGSNVSAIDELLNVMSLTRNFEMQVRMMKTA-ETLAQAGN 237

Query: 240 NI 241
            +
Sbjct: 238 KL 239


>gi|531461|gb|AAA67879.1| orfF [Bacillus subtilis subsp. subtilis str. 168]
          Length = 271

 Score =  118 bits (296), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 48/276 (17%), Positives = 99/276 (35%), Gaps = 41/276 (14%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVV----------GA 47
           M        +A +A ++R   +++N++N +T G++  +     F E++          G 
Sbjct: 1   MLKGLYTATSAMIAQQRRTEMLSNNIANANTSGYKADQGSMRAFPEMLLSRIESKSPAGT 60

Query: 48  IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA-------------WFALES 94
            + +I    + V   +       GS  ST    D AL  +              ++ +++
Sbjct: 61  SRTEIGSVNTGVYMQELKPLFTQGSLKSTDQPTDIALIENQVPMSAETNEKAALFYPVQT 120

Query: 95  PRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV 154
             GI  ++   F + ++ + ++ +G+  +         I   +E F V E G ++  G+ 
Sbjct: 121 ADGIRYSKSSTFSLNEN-NQLTINGRPILSTDRQP---ITVDNENFTVSENGTVTTNGRT 176

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVK--------RGFLEDSNANS 206
              + +   +  +   R  N   S               V         RGF   SN + 
Sbjct: 177 AGQIDVRMAEDVRNLKRDGNDLYSTADGNDLPSARGNNQVAYSLKTRRLRGF---SNVDV 233

Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
                +M    + F +   +I   +KSM +A   I 
Sbjct: 234 TSAYTEMTEAYRSFEANQKVIQAYDKSMDKAANEIG 269


>gi|312112590|ref|YP_003990906.1| fagellar hook-basal body protein [Geobacillus sp. Y4.1MC1]
 gi|311217691|gb|ADP76295.1| fagellar hook-basal body protein [Geobacillus sp. Y4.1MC1]
          Length = 285

 Score =  118 bits (296), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 50/282 (17%), Positives = 99/282 (35%), Gaps = 41/282 (14%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ------- 54
             S          L+Q+L  +++N++N++T GF+  +  F E++     ++ Q       
Sbjct: 4   LRSMITAANTMAQLQQQLDVISNNIANSNTAGFKRRETSFGELLAQQFTNLPQDEAPRLT 63

Query: 55  -----KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL------ESPRGIILTRD 103
                        +  +  + G+ + T   LD AL  +  F           + I  TR 
Sbjct: 64  PNGLRYGVGARLAETNIVLKQGAIMQTDRPLDVALTKEGQFFRVLIQGENGTQEIGYTRA 123

Query: 104 GRFKVTDDGSLVS-----ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158
           G F +T      +      S   PVLD  + PI +P   +   + + G I+        M
Sbjct: 124 GAFYLTPSAGNQNVLMLVTSDGNPVLDENNAPIWLPNGYKDIEISDNGTITATAPDGRIM 183

Query: 159 GLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----------------SGVTVKRGFLED 201
              ++ ++     +       NI   P  +                  + + + +G LE 
Sbjct: 184 RRVNIGVTSILRPQLLQSAGNNIWTLPDFNALNVNAADVAVNMTGNLRAQIGMTQGALEQ 243

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           SN +   E+  M+   + +      I  +++ +   I  I S
Sbjct: 244 SNVDLGTELTDMMITERSYQLNARSISISDQMLG-LINGIRS 284


>gi|220917700|ref|YP_002493004.1| flagellar basal-body rod protein FlgF [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219955554|gb|ACL65938.1| flagellar basal-body rod protein FlgF [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 235

 Score =  118 bits (296), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 51/239 (21%), Positives = 86/239 (35%), Gaps = 11/239 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + +   +A  ++L  VADN++N  T GF+  +  F   +        Q   + A
Sbjct: 1   MADGIYVSMCGAVARAEQLDAVADNLANAQTPGFKAARPAFESFLAP---GAAQDKRYAA 57

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119
           +    +    G    TG  LD   E   +  + +   G   TRDGR  +  D  LVS   
Sbjct: 58  AVATGIDLRPGPTQRTGNALDVVPEAGMFLTVRTAGGGTAYTRDGRLTLDPDRRLVS--- 114

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
               L        +   D    V   G +      +A +GL  +D      R   S ++P
Sbjct: 115 DGRPLLSPRGEPIVLPPDLEARVDAAGRVWAGDVEVAALGLARLDGPVD--RVGPSLLAP 172

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
                 L   +   V+ G LE  NA ++    Q++   + + +    I    +    A+
Sbjct: 173 GAGGRALP--AEGAVRSGELELGNAGALEASIQLVSAQRAYEASLQAIQTYRQLDQRAV 229


>gi|323190589|gb|EFZ75861.1| flagellar basal-body rod protein FlgF [Escherichia coli RN587/1]
          Length = 251

 Score =  118 bits (296), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 82/252 (32%), Gaps = 16/252 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   +        + V 
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVGGLSLPTRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G    T   LD AL+ D W A+++       TR+G  +V   G L     
Sbjct: 59  ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
            +PV+  A         +              G    T+        V  +   V+R + 
Sbjct: 117 GHPVVGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176

Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           GI              L+    + V  G LE SN N++  M  MI   ++F     +I  
Sbjct: 177 GIFRLSAESQATRGPVLQADPTLRVLSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236

Query: 230 NEKSMLEAIRNI 241
            + +   A   +
Sbjct: 237 VDDNAGRA-NQL 247


>gi|146311247|ref|YP_001176321.1| flagellar basal body rod protein FlgF [Enterobacter sp. 638]
 gi|145318123|gb|ABP60270.1| flagellar basal-body rod protein FlgF [Enterobacter sp. 638]
          Length = 251

 Score =  118 bits (296), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 80/252 (31%), Gaps = 16/252 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   ++       + V 
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNAMRAV--PVEGLTLPTRTLVI 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSL----V 115
           +         G    T   LD AL+ D W A+++       TR+G  +V   G L     
Sbjct: 59  ASTPGADMTPGQMDYTSRPLDVALQQDGWLAVQAADGSEGYTRNGNIQVDSTGQLTIQGH 118

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA------TMGLYSVDMSQGF 169
              G+   L +          D   +    G+       +         G        G 
Sbjct: 119 PVIGESGPLTVPEGSEITIAADGTISALNPGDPPNTVAPVGKLKLVKAEGNEVTRGDDGL 178

Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
            R   S ++       L+    + +  G LE SN   +  M  MI   ++F     +I  
Sbjct: 179 FRTSASALA--ARGATLQPDPSIRIMSGVLEGSNVKPVAAMTDMIASARRFEMQMKVITS 236

Query: 230 NEKSMLEAIRNI 241
            +++   A   +
Sbjct: 237 VDENAGRA-NQL 247


>gi|331682579|ref|ZP_08383198.1| flagellar basal-body rod protein FlgF [Escherichia coli H299]
 gi|331080210|gb|EGI51389.1| flagellar basal-body rod protein FlgF [Escherichia coli H299]
          Length = 251

 Score =  118 bits (296), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 83/252 (32%), Gaps = 16/252 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   ++       + V 
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G    T   LD AL+ D W A+++       TR+G  +V   G L     
Sbjct: 59  ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
            +PV+  A         +              G    T+        V  +   V+R + 
Sbjct: 117 GHPVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176

Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           GI              L+    + V  G LE SN N++  M  MI   ++F     +I  
Sbjct: 177 GIFRLSAETQTTRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236

Query: 230 NEKSMLEAIRNI 241
            + +   A   +
Sbjct: 237 VDDNAGRA-NQL 247


>gi|295400718|ref|ZP_06810695.1| fagellar hook-basal body protein [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|294977299|gb|EFG52900.1| fagellar hook-basal body protein [Geobacillus thermoglucosidasius
           C56-YS93]
          Length = 285

 Score =  118 bits (296), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 50/282 (17%), Positives = 99/282 (35%), Gaps = 41/282 (14%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ------- 54
             S          L+Q+L  +++N++N++T GF+  +  F E++     ++ Q       
Sbjct: 4   LRSMITAANTMAQLQQQLDVISNNIANSNTAGFKRRETSFGELLAQQFANLPQDEAPRLT 63

Query: 55  -----KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL------ESPRGIILTRD 103
                        +  +  + G+ + T   LD AL  +  F           + I  TR 
Sbjct: 64  PNGLRYGVGARLAETNIVLKQGAIMQTDRPLDVALTKEGQFFRVLIQGENGTQEIGYTRA 123

Query: 104 GRFKVTDDGSLVS-----ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158
           G F +T      +      S   PVLD  + PI +P   +   + + G I+        M
Sbjct: 124 GAFYLTPSAGNQNVLMLVTSDGNPVLDENNAPIWLPNGYKDIEISDNGTITATAPDGRIM 183

Query: 159 GLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----------------SGVTVKRGFLED 201
              ++ ++     +       NI   P  +                  + + + +G LE 
Sbjct: 184 RRVNIGVTSILRPQLLQSAGNNIWTLPDFNALNVNAADVAVNMTGNLRAQIGMTQGALEQ 243

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           SN +   E+  M+   + +      I  +++ +   I  I S
Sbjct: 244 SNVDLGTELTDMMITERSYQLNARSISISDQMLG-LINGIRS 284


>gi|172058673|ref|YP_001815133.1| flagellar basal body rod protein [Exiguobacterium sibiricum 255-15]
 gi|171991194|gb|ACB62116.1| flagellar basal body rod protein [Exiguobacterium sibiricum 255-15]
          Length = 262

 Score =  118 bits (296), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 47/265 (17%), Positives = 92/265 (34%), Gaps = 29/265 (10%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAI--------- 48
           M         A  AL+++   +++N++N  T GFR  +     F E++            
Sbjct: 1   MLRGMYTASGAMQALQRQQEMLSNNLANARTPGFRADQASLRTFPEMMIQQSGVNEQSGV 60

Query: 49  --KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFAL---EGDAWFALES------PRG 97
             +  + +  + V       +  +GS   TG   D  +   EG A F +           
Sbjct: 61  RSRGTVGKLATGVFMQAATPNFALGSITETGNATDLQISSLEGAALFTIRHADPATGEEE 120

Query: 98  IILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157
            + T +G+F V  DG L +      + D       + +   +    +       G+ I  
Sbjct: 121 TLYTTNGQFAVGQDGLLRTTENDLVLGDAGQPLNVVNEDFTV--SADGAVTDGNGQAIGN 178

Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217
           +GL   +  +   R  N             +   + V +G LE  N      M +M    
Sbjct: 179 LGLVVTNQPETLERTGNGLFRSPDA----LNGGAIKVDQGVLELGNVEVEQTMTEMNAGL 234

Query: 218 QKFNSITTLIDENEKSMLEAIRNIA 242
           ++F +   +I   +++  +A+  I 
Sbjct: 235 RQFEANQKVIQAYDRTAEKAVSEIG 259


>gi|324113872|gb|EGC07846.1| flagellar basal-body rod protein FlgF [Escherichia fergusonii B253]
 gi|325497615|gb|EGC95474.1| flagellar basal body rod protein FlgF [Escherichia fergusonii
           ECD227]
          Length = 251

 Score =  118 bits (296), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 51/252 (20%), Positives = 83/252 (32%), Gaps = 16/252 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   ++       + V 
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G    T   LD AL+ D W A+++       TR+G  +V   G L     
Sbjct: 59  ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPGGQL--TIQ 116

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
            +PV+  A         +              G    T+        V  S   V+R + 
Sbjct: 117 GHPVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGKLKLVKASDNEVQRGDD 176

Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           GI              L+    + V  G LE SN N++  M  MI   ++F     +I  
Sbjct: 177 GIFRLSAESQATRGPVLQADPSLRVMSGVLEGSNVNAVSAMSDMIANARRFEMQMKVISS 236

Query: 230 NEKSMLEAIRNI 241
            + +   A   +
Sbjct: 237 VDDNEGRA-NQL 247


>gi|251799752|ref|YP_003014483.1| hypothetical protein Pjdr2_5791 [Paenibacillus sp. JDR-2]
 gi|247547378|gb|ACT04397.1| protein of unknown function DUF1078 domain protein [Paenibacillus
           sp. JDR-2]
          Length = 275

 Score =  118 bits (295), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 47/275 (17%), Positives = 104/275 (37%), Gaps = 34/275 (12%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS--- 57
           M +S      +  AL+Q+L  +ADN++N +TVG++  +  F +++   +   D       
Sbjct: 1   MNSSMINASVSMNALQQKLDMLADNIANVNTVGYKRKEATFEDLLNNTRKQPDAFNQPGR 60

Query: 58  ----------FVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL--ESPRGIILTRDGR 105
                              + + G+  +T  + D A+EGDA F +   +      TR+G 
Sbjct: 61  LTSLNFNQGWGSRLAMIQPNLQQGTIKTTEKDTDLAIEGDALFEVAVNANGDRAYTRNGA 120

Query: 106 FK-----------VTDDGSLV---SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQK 151
            +            T +G  V   + +G+ P++  +   +++        V   G   + 
Sbjct: 121 LQLTVAANGDTILATPEGYPVVANTPAGEGPLVVPSGYQLRVNADGTAEGVATDGSTIEL 180

Query: 152 GKV---IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-TVKRGFLEDSNANSM 207
           G +    AT       ++       +     ++      +      +++G LE SN N  
Sbjct: 181 GSIKLVQATRPAALTLVADNLYEIADGINVADVLQNVTPNGENGIALRQGALEQSNVNLG 240

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            EM ++I++ + +      +  ++  M     ++ 
Sbjct: 241 DEMTELINVQRAYQMAARALTSSDTMMG-LANSLR 274


>gi|197122908|ref|YP_002134859.1| flagellar basal body rod protein [Anaeromyxobacter sp. K]
 gi|196172757|gb|ACG73730.1| flagellar basal body rod protein [Anaeromyxobacter sp. K]
          Length = 235

 Score =  118 bits (295), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 52/239 (21%), Positives = 87/239 (36%), Gaps = 11/239 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + +   +A  ++L  VADN++N  T GF+  +  F   +        Q   + A
Sbjct: 1   MADGIYVSMCGAVARAEQLDAVADNLANAQTPGFKAARPAFESFLAP---GAAQDKRYAA 57

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119
           +    +    G    TG  LD   E   +  + +   G   TRDGR  +  D  LVS   
Sbjct: 58  AVATGIDLRPGPTQRTGNALDVVPEAGMFLTVRTAGGGTAYTRDGRLTLDPDRRLVS--- 114

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
               L  A     +   D    V   G +      +A +GL  +D      R   S ++P
Sbjct: 115 DGRPLLSAQGEPIVLPPDLEARVDAAGRVWAGDVEVAALGLARLDGPVD--RVGPSLLAP 172

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
                 L   +   V+ G LE  NA ++    Q++   + + +    I    +    A+
Sbjct: 173 GAGGRALP--AEGAVRSGELELGNAGALEASIQLVSAQRAYEASLQAIQTYRQLDQRAV 229


>gi|145297455|ref|YP_001140296.1| lateral flagellar basal-body rod protein LfgF [Aeromonas
           salmonicida subsp. salmonicida A449]
 gi|142850227|gb|ABO88548.1| lateral flagellar basal-body rod protein LfgF [Aeromonas
           salmonicida subsp. salmonicida A449]
          Length = 236

 Score =  118 bits (295), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 80/235 (34%), Gaps = 5/235 (2%)

Query: 9   LAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV-VGAIKNDIDQKISFVASGKEYLS 67
           ++            A+N++N +T GFR     F  V   A+  D                
Sbjct: 1   MSGAQHTLMAQQIRANNLANVNTAGFRAD---FERVSAYALTGDGYPSRVMAREEMAGTD 57

Query: 68  KEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYPVLDM 126
            + G+ + TG +LD A+ G+ +  +++       TR G  +V  +G L   S        
Sbjct: 58  FKAGALMQTGRKLDVAVRGEGFITVQTADGKEAYTRAGNLEVDAEGLLTLNSRPVLGDGG 117

Query: 127 ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPL 186
             V           +          G  +    L  V+     + +   G+         
Sbjct: 118 EMVLPAYRDLSFGKDGSLSITPPGGGARLDVGRLKLVNPDPVELVKGPDGLFRLRQGGDA 177

Query: 187 EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           E    V +  GFLE +N N++ E+   + LT+ F     L+   +    +  R I
Sbjct: 178 ETSEQVVLASGFLEGANVNAVDELISSMSLTRNFELQVKLMKTADDQARQGARLI 232


>gi|331652130|ref|ZP_08353149.1| flagellar basal-body rod protein FlgF [Escherichia coli M718]
 gi|331050408|gb|EGI22466.1| flagellar basal-body rod protein FlgF [Escherichia coli M718]
          Length = 251

 Score =  118 bits (295), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 83/252 (32%), Gaps = 16/252 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   ++       + V 
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G    T   LD AL+ D W A+++       TR+G  +V   G L     
Sbjct: 59  ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
            +PV+  A         +              G    T+        V  +   V+R + 
Sbjct: 117 GHPVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176

Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           GI              L+    + V  G LE SN N++  M  MI   ++F     +I  
Sbjct: 177 GIFRLSAERQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236

Query: 230 NEKSMLEAIRNI 241
            + +   A   +
Sbjct: 237 VDDNAGRA-NQL 247


>gi|294084436|ref|YP_003551194.1| flagellar hook protein [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292664009|gb|ADE39110.1| Flagellar hook protein [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 269

 Score =  118 bits (295), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 43/269 (15%), Positives = 90/269 (33%), Gaps = 34/269 (12%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG--AIKNDIDQKISFVAS 61
              I  +   A  + +  +++N++N  T GF+    +F ++ G    K    Q       
Sbjct: 1   MLAIIRSGIAAANKEIGVISNNIANASTNGFKRSSAQFQDIYGIAGEKRAAAQVGKGTVF 60

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESP---RGIILTRDGRFKVTDDGSLVSAS 118
                +   G+F ++G+ELD A+ G+  F +  P     +  TRDG  ++ ++G +V+  
Sbjct: 61  DASRRNHAQGAFKTSGSELDLAVAGEGMFIVAPPNAGNELRYTRDGSMRLDENGFIVNNE 120

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLY----------------- 161
           G + +    +      +++   +     E       I   G                   
Sbjct: 121 GHFLIGLDGAPLRLPLRRNPAEDGDVAAEELLTSVSIGVDGQIKATYAGAMTRGNGAVIN 180

Query: 162 -------SVDMSQGFVRRENSGISPNI-----PPTPLEDLSGVTVKRGFLEDSNANSMYE 209
                            + N     N              +   V  G LE SN     E
Sbjct: 181 RGTIALARFQNEADLTSKGNGQFIMNAKTGLPAVGAASQGNFGDVLSGNLEVSNVKINDE 240

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           +  MI   Q +++ + ++  +   + + +
Sbjct: 241 LTSMIRAQQAYSASSRMLQADSDIVKKFL 269


>gi|317492427|ref|ZP_07950856.1| flagellar basal-body rod protein FlgF [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316919766|gb|EFV41096.1| flagellar basal-body rod protein FlgF [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 251

 Score =  118 bits (295), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 48/251 (19%), Positives = 89/251 (35%), Gaps = 14/251 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A     ++ +  A+NM+N  T GFR        V   ++ D  +  + VA
Sbjct: 1   MDHAIYTAMGAASQTLEQQAITANNMANASTPGFRAQLAALRAV--PVEGDSIETRTLVA 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +        +G    T   LD AL+ D W A+ +       TR+G  ++   G  +++ G
Sbjct: 59  ASTPMHDMSMGKLDYTERPLDVALQQDGWLAVRNADGTEAYTRNGNLQINTAG-QLTSQG 117

Query: 120 KYPVLDMASVPIQIPQKDEIF---NVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
              + D   + I    +  I     +   G   Q         L  V  +   +   + G
Sbjct: 118 NLVIGDNGPIAIPDRAEITIAADGTITALGAGDQPNTTTQVGRLKLVKATSQEMAHGDDG 177

Query: 177 ISPNIPPTPLEDL------SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
           +    P    +          + +  G LE SN   +  M  MI   ++F     +I   
Sbjct: 178 LFHLTPEAQQQRGATLTLDPEMRLMPGVLEGSNVKPVDTMVDMIANARRFEMQMKVIRSV 237

Query: 231 EKSMLEAIRNI 241
           + +  +A   +
Sbjct: 238 DDNEQKA-NQL 247


>gi|313682109|ref|YP_004059847.1| flagellar hook-basal body protein [Sulfuricurvum kujiense DSM
           16994]
 gi|313154969|gb|ADR33647.1| flagellar hook-basal body protein [Sulfuricurvum kujiense DSM
           16994]
          Length = 270

 Score =  118 bits (295), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 50/266 (18%), Positives = 100/266 (37%), Gaps = 24/266 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDIDQKIS 57
           MQT +       +A   R+ T+A N++N +T G++  ++    F+ +    ++++     
Sbjct: 1   MQTGYYAATGGMVAQFNRMDTIASNLANANTAGYKRDQLITGDFARLYKTAQSELPIANQ 60

Query: 58  FVASGKEYLSKEVGSFISTGTELDFAL---------------EGDAWFALESPRGIILTR 102
             A+ + +          T    D +L               +   +FA+ +P+GI LTR
Sbjct: 61  TEAAAQYFNRALSRVPQITDAYTDQSLGAMQRTDNTFDLALSKEGQFFAVNTPQGIRLTR 120

Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162
           DG F + D+G LV+  G   +    +     PQ   I         +        +    
Sbjct: 121 DGSFTLNDEGKLVNKQGHEVLAADKTPITFNPQDSVITLDKNGQFSTNVPGTTQMVANKR 180

Query: 163 V-----DMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217
           +        +  ++  N+   P             +V +GF+E SN N++ EM  ++   
Sbjct: 181 LLVVEPQNIRNIMKEGNNLYLPEAADPLTPLAESGSVMQGFIEKSNVNAVNEMIALVEAN 240

Query: 218 QKFNSITTLIDENEKSMLE-AIRNIA 242
           +        +D     + + AI  +A
Sbjct: 241 RLVGMYQKAMDSQMNDLNKDAIEKLA 266


>gi|309798071|ref|ZP_07692446.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 145-7]
 gi|308118354|gb|EFO55616.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 145-7]
          Length = 251

 Score =  118 bits (295), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 51/252 (20%), Positives = 83/252 (32%), Gaps = 16/252 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   ++       + V 
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G    T   LD AL+ D W A++S       TR+G  +V   G L     
Sbjct: 59  ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQSADGSEGYTRNGSIQVDPTGQL--TIQ 116

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
            +PV+  A         +              G    T+        V  +   V+R + 
Sbjct: 117 GHPVIGEAGPIAVPEGGEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176

Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           GI              L+    + V  G LE SN N++  M  MI   ++F     +I  
Sbjct: 177 GIFRLSAESQATRGPILQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236

Query: 230 NEKSMLEAIRNI 241
            + +   A   +
Sbjct: 237 VDDNAGRA-NQL 247


>gi|301023264|ref|ZP_07187061.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 69-1]
 gi|284920900|emb|CBG33963.1| flagellar basal-body rod protein FlgF [Escherichia coli 042]
 gi|300397109|gb|EFJ80647.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 69-1]
          Length = 251

 Score =  118 bits (294), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 84/252 (33%), Gaps = 16/252 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   ++       + V 
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G    T   LD AL+ D W A+++       TR+G  +V   G L+    
Sbjct: 59  ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQLI--IQ 116

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
            +PV+  A         +              G    T+        V  +   V+R + 
Sbjct: 117 GHPVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176

Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           GI              L+    + V  G LE SN N++  M  MI   ++F     +I  
Sbjct: 177 GIFRLSAESQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236

Query: 230 NEKSMLEAIRNI 241
            + +   A   +
Sbjct: 237 VDDNAGRA-NQL 247


>gi|157155680|ref|YP_001462311.1| flagellar basal body rod protein FlgF [Escherichia coli E24377A]
 gi|193064568|ref|ZP_03045648.1| flagellar basal-body rod protein FlgF [Escherichia coli E22]
 gi|256018666|ref|ZP_05432531.1| flagellar basal body rod protein FlgF [Shigella sp. D9]
 gi|260843317|ref|YP_003221095.1| flagellar component FlgF of cell-proximal portion of basal-body rod
           [Escherichia coli O103:H2 str. 12009]
 gi|260854560|ref|YP_003228451.1| flagellar component FlgF of cell-proximal portion of basal-body rod
           [Escherichia coli O26:H11 str. 11368]
 gi|260867440|ref|YP_003233842.1| flagellar component FlgF of cell-proximal portion of basal-body rod
           [Escherichia coli O111:H- str. 11128]
 gi|293433367|ref|ZP_06661795.1| flagellar basal-body rod protein FlgF [Escherichia coli B088]
 gi|300816779|ref|ZP_07096999.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 107-1]
 gi|300922603|ref|ZP_07138703.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 182-1]
 gi|301328553|ref|ZP_07221614.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 78-1]
 gi|332279735|ref|ZP_08392148.1| flagellar basal-body rod protein FlgF [Shigella sp. D9]
 gi|157077710|gb|ABV17418.1| flagellar basal-body rod protein FlgF [Escherichia coli E24377A]
 gi|192927820|gb|EDV82434.1| flagellar basal-body rod protein FlgF [Escherichia coli E22]
 gi|257753209|dbj|BAI24711.1| flagellar component FlgF of cell-proximal portion of basal-body rod
           [Escherichia coli O26:H11 str. 11368]
 gi|257758464|dbj|BAI29961.1| flagellar component FlgF of cell-proximal portion of basal-body rod
           [Escherichia coli O103:H2 str. 12009]
 gi|257763796|dbj|BAI35291.1| flagellar component FlgF of cell-proximal portion of basal-body rod
           [Escherichia coli O111:H- str. 11128]
 gi|291324186|gb|EFE63608.1| flagellar basal-body rod protein FlgF [Escherichia coli B088]
 gi|300421080|gb|EFK04391.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 182-1]
 gi|300530553|gb|EFK51615.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 107-1]
 gi|300844945|gb|EFK72705.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 78-1]
 gi|323156884|gb|EFZ43018.1| flagellar basal-body rod protein FlgF [Escherichia coli EPECa14]
 gi|323175692|gb|EFZ61286.1| flagellar basal-body rod protein FlgF [Escherichia coli 1180]
 gi|323185800|gb|EFZ71161.1| flagellar basal-body rod protein FlgF [Escherichia coli 1357]
 gi|324117352|gb|EGC11259.1| flagellar basal-body rod protein FlgF [Escherichia coli E1167]
 gi|332102087|gb|EGJ05433.1| flagellar basal-body rod protein FlgF [Shigella sp. D9]
          Length = 251

 Score =  118 bits (294), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 51/252 (20%), Positives = 83/252 (32%), Gaps = 16/252 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   ++       + V 
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G    T   LD AL+ D W A++S       TR+G  +V   G L     
Sbjct: 59  ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQSADGSEGYTRNGSIQVDPTGQL--TIQ 116

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
            +PV+  A         +              G    T+        V  +   V+R + 
Sbjct: 117 GHPVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176

Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           GI              L+    + V  G LE SN N++  M  MI   ++F     +I  
Sbjct: 177 GIFRLSAESQATRGPILQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236

Query: 230 NEKSMLEAIRNI 241
            + +   A   +
Sbjct: 237 VDDNAGRA-NQL 247


>gi|318604253|emb|CBY25751.1| flagellar basal-body rod protein FlgF [Yersinia enterocolitica
           subsp. palearctica Y11]
          Length = 243

 Score =  118 bits (294), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 48/239 (20%), Positives = 90/239 (37%), Gaps = 7/239 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       ++       +    A+N++N +T GFR            +          V 
Sbjct: 1   MDKLLYTAVSGANRSLTQQQIHANNLANVNTQGFRADLE--RATATQVPGGSYNSRVAVL 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           S    +    GS   TG ELD A++     A+ S    + TR+G+ +V  DG  ++ +G 
Sbjct: 59  SQNAGVDMTAGSLQETGRELDVAIKDRGLIAVLSGGREVYTRNGQMEVGPDGD-LTINGM 117

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSGI 177
             + D  ++ +       + + G    I Q G +     +     VD+    + + N G+
Sbjct: 118 PVLGDGGAIVLPAYSAVSVADDGTIAIIPQAGGIKTPAEVDRIKLVDIPANQLSKNNRGL 177

Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
             N           V +    LE SN +++ EM   I L+++F +   ++   E+    
Sbjct: 178 LVNRRG-AAARDENVQLVSKHLESSNISAISEMTASISLSRQFEAQIKMMKVAEELAQS 235


>gi|331672597|ref|ZP_08373386.1| flagellar basal-body rod protein FlgF [Escherichia coli TA280]
 gi|331070240|gb|EGI41606.1| flagellar basal-body rod protein FlgF [Escherichia coli TA280]
          Length = 251

 Score =  118 bits (294), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 84/252 (33%), Gaps = 16/252 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   ++       + V 
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G    T   LD AL+ D W A+++       TR+G  +V   G L     
Sbjct: 59  ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
            +PV+  A         +          +   G    T+        V  +   V+R + 
Sbjct: 117 GHPVVGEAGPIAVPEGAEITIAADGTISVLNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176

Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           GI              L+    + V  G LE SN N++  M  MI   ++F     +I  
Sbjct: 177 GIFRLSAESQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236

Query: 230 NEKSMLEAIRNI 241
            + +   A   +
Sbjct: 237 VDDNAGRA-NQL 247


>gi|170020527|ref|YP_001725481.1| flagellar basal body rod protein FlgF [Escherichia coli ATCC 8739]
 gi|312971214|ref|ZP_07785392.1| flagellar basal-body rod protein FlgF [Escherichia coli 1827-70]
 gi|169755455|gb|ACA78154.1| flagellar basal-body rod protein FlgF [Escherichia coli ATCC 8739]
 gi|310336416|gb|EFQ01602.1| flagellar basal-body rod protein FlgF [Escherichia coli 1827-70]
          Length = 251

 Score =  118 bits (294), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 83/252 (32%), Gaps = 16/252 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   ++       + V 
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G    T   LD AL+ D W A+++       TR+G  +V   G L     
Sbjct: 59  ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
            +PV+  A         +              G    T+        V  +   V+R + 
Sbjct: 117 GHPVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176

Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           GI              L+    + V  G LE SN N++  M  MI   ++F     +I  
Sbjct: 177 GIFRLSAESQATRGPILQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236

Query: 230 NEKSMLEAIRNI 241
            + +   A   +
Sbjct: 237 VDDNAGRA-NQL 247


>gi|170680164|ref|YP_001744103.1| flagellar basal body rod protein FlgF [Escherichia coli SMS-3-5]
 gi|218704485|ref|YP_002412004.1| flagellar basal body rod protein FlgF [Escherichia coli UMN026]
 gi|293404361|ref|ZP_06648355.1| flgF [Escherichia coli FVEC1412]
 gi|298380141|ref|ZP_06989746.1| flagellar basal-body rod protein flgF [Escherichia coli FVEC1302]
 gi|300899596|ref|ZP_07117835.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 198-1]
 gi|307310145|ref|ZP_07589795.1| flagellar basal-body rod protein FlgF [Escherichia coli W]
 gi|331662483|ref|ZP_08363406.1| flagellar basal-body rod protein FlgF [Escherichia coli TA143]
 gi|170517882|gb|ACB16060.1| flagellar basal-body rod protein FlgF [Escherichia coli SMS-3-5]
 gi|218431582|emb|CAR12461.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli UMN026]
 gi|291428947|gb|EFF01972.1| flgF [Escherichia coli FVEC1412]
 gi|298279839|gb|EFI21347.1| flagellar basal-body rod protein flgF [Escherichia coli FVEC1302]
 gi|300356867|gb|EFJ72737.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 198-1]
 gi|306909863|gb|EFN40357.1| flagellar basal-body rod protein FlgF [Escherichia coli W]
 gi|315060355|gb|ADT74682.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli W]
 gi|320200973|gb|EFW75557.1| Flagellar basal-body rod protein FlgF [Escherichia coli EC4100B]
 gi|323379084|gb|ADX51352.1| flagellar basal-body rod protein FlgF [Escherichia coli KO11]
 gi|331060905|gb|EGI32869.1| flagellar basal-body rod protein FlgF [Escherichia coli TA143]
          Length = 251

 Score =  118 bits (294), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 83/252 (32%), Gaps = 16/252 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   ++       + V 
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G    T   LD AL+ D W A+++       TR+G  +V   G L     
Sbjct: 59  ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
            +PV+  A         +              G    T+        V  +   V+R + 
Sbjct: 117 GHPVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176

Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           GI              L+    + V  G LE SN N++  M  MI   ++F     +I  
Sbjct: 177 GIFRLSAESQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236

Query: 230 NEKSMLEAIRNI 241
            + +   A   +
Sbjct: 237 VDDNAGRA-NQL 247


>gi|163784308|ref|ZP_02179218.1| hypothetical protein HG1285_04693 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159880426|gb|EDP74020.1| hypothetical protein HG1285_04693 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 200

 Score =  118 bits (294), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 39/201 (19%), Positives = 73/201 (36%), Gaps = 21/201 (10%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +         A +  L  +++N++N +TVGF+  +  F +++     D         
Sbjct: 1   MIRALWTSATGMEAQQTNLDVISNNIANVNTVGFKKSRANFEDLIYQNLRDPGVMSSTET 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP-RGIILTRDGRF 106
                 Q    V       +   GS + T   LD A++G  +F +E P  G   TR G F
Sbjct: 61  RVPTGMQVGLGVKLSDISKTFSQGSLMKTDRPLDIAIQGKGFFKVELPGGGEAYTRAGNF 120

Query: 107 KVTDDGSLVSASGK------YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           ++ D G +V+  G               + I I +   ++ V  +G +    + +  + L
Sbjct: 121 QIDDQGYIVTPEGYRLSPNIQITAPETLISINISENGNVYAVRNEGGVQ-TTEELGQINL 179

Query: 161 YSVDMSQGFVRRENSGISPNI 181
           Y+     G      +      
Sbjct: 180 YNFINPPGLQAIGQNLFKQTD 200


>gi|331646335|ref|ZP_08347438.1| flagellar basal-body rod protein FlgF [Escherichia coli M605]
 gi|222032830|emb|CAP75569.1| flagellar basal-body rod protein flgF [Escherichia coli LF82]
 gi|281178186|dbj|BAI54516.1| flagellar basal-body rod protein FlgF [Escherichia coli SE15]
 gi|312945639|gb|ADR26466.1| flagellar basal body rod protein FlgF [Escherichia coli O83:H1 str.
           NRG 857C]
 gi|330910891|gb|EGH39401.1| flagellar basal-body rod protein FlgF [Escherichia coli AA86]
 gi|331045087|gb|EGI17214.1| flagellar basal-body rod protein FlgF [Escherichia coli M605]
          Length = 251

 Score =  118 bits (294), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 49/252 (19%), Positives = 82/252 (32%), Gaps = 16/252 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   ++       + V 
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G    T   LD AL+ D W  +++       TR+G  +V   G L     
Sbjct: 59  ASTPGADMTPGKMDYTSRPLDVALQQDGWLVVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
            +PV+  A         +              G    T+        V  +   V+R + 
Sbjct: 117 GHPVVGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176

Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           GI              L+    + V  G LE SN N++  M  MI   ++F     +I  
Sbjct: 177 GIFRLSAESQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236

Query: 230 NEKSMLEAIRNI 241
            + +   A   +
Sbjct: 237 VDDNAGRA-NQL 247


>gi|300928371|ref|ZP_07143905.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 187-1]
 gi|300463629|gb|EFK27122.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 187-1]
          Length = 251

 Score =  118 bits (294), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 84/252 (33%), Gaps = 16/252 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A   +  + +  A N++N  T GFR        V   ++       + V 
Sbjct: 1   MDHAIYTAMGAASQILNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G    T   LD AL+ D W A+++       TR+G  +V   G L     
Sbjct: 59  ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
            +PV+  A         +              G    T+        V  +   V+R + 
Sbjct: 117 GHPVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176

Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           GI              L+    + V  G LE SN N++  M  MI   ++F     +I  
Sbjct: 177 GIFRLSAETQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236

Query: 230 NEKSMLEAIRNI 241
            + +   A   +
Sbjct: 237 VDDNAGRA-NQL 247


>gi|300918679|ref|ZP_07135260.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 115-1]
 gi|300414173|gb|EFJ97483.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 115-1]
          Length = 251

 Score =  118 bits (294), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 51/252 (20%), Positives = 83/252 (32%), Gaps = 16/252 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   ++       + V 
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G    T   LD AL+ D W A++S       TR+G  +V   G L     
Sbjct: 59  ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQSADGSEGYTRNGSIQVDPTGQL--TIQ 116

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
            +PV+  A         +              G    T+        V  +   V+R + 
Sbjct: 117 GHPVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176

Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           GI              L+    + V  G LE SN N++  M  MI   ++F     +I  
Sbjct: 177 GIFRLSAETQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236

Query: 230 NEKSMLEAIRNI 241
            + +   A   +
Sbjct: 237 VDDNAGRA-NQL 247


>gi|218549195|ref|YP_002382986.1| flagellar basal body rod protein FlgF [Escherichia fergusonii ATCC
           35469]
 gi|218356736|emb|CAQ89364.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia fergusonii ATCC 35469]
          Length = 251

 Score =  118 bits (294), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 51/252 (20%), Positives = 83/252 (32%), Gaps = 16/252 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   ++       + V 
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G    T   LD AL+ D W A+++       TR+G  +V   G L     
Sbjct: 59  ASTPGADMTPGKMDYTQRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPGGQL--TIQ 116

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
            +PV+  A         +              G    T+        V  S   V+R + 
Sbjct: 117 GHPVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGKLKLVKASDNEVQRGDD 176

Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           GI              L+    + V  G LE SN N++  M  MI   ++F     +I  
Sbjct: 177 GIFRLSAESQATRGPVLQADPSLRVMSGVLEGSNVNAVSAMSDMIANARRFEMQMKVISS 236

Query: 230 NEKSMLEAIRNI 241
            + +   A   +
Sbjct: 237 VDDNEGRA-NQL 247


>gi|218700420|ref|YP_002408049.1| flagellar basal body rod protein FlgF [Escherichia coli IAI39]
 gi|300938642|ref|ZP_07153371.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 21-1]
 gi|218370406|emb|CAR18213.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli IAI39]
 gi|300456427|gb|EFK19920.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 21-1]
          Length = 251

 Score =  118 bits (294), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 83/252 (32%), Gaps = 16/252 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   ++       + V 
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119
           +         G    T   LD AL+ D W A+++       TR+G  +V   G L     
Sbjct: 59  ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADSSEGYTRNGSIQVDPTGQL--TIQ 116

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
            +PV+  A         +              G    T+        V  +   V+R + 
Sbjct: 117 GHPVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176

Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           GI              L+    + V  G LE SN N++  M  MI   ++F     +I  
Sbjct: 177 GIFRLSAESQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236

Query: 230 NEKSMLEAIRNI 241
            + +   A   +
Sbjct: 237 VDDNAGRA-NQL 247


>gi|15801194|ref|NP_287211.1| flagellar basal body rod protein FlgF [Escherichia coli O157:H7
           EDL933]
 gi|15830709|ref|NP_309482.1| flagellar basal body rod protein FlgF [Escherichia coli O157:H7
           str. Sakai]
 gi|168747147|ref|ZP_02772169.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC4113]
 gi|168758630|ref|ZP_02783637.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC4401]
 gi|168764489|ref|ZP_02789496.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC4501]
 gi|168767736|ref|ZP_02792743.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC4486]
 gi|168773922|ref|ZP_02798929.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC4196]
 gi|168790012|ref|ZP_02815019.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC869]
 gi|168802022|ref|ZP_02827029.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC508]
 gi|195935467|ref|ZP_03080849.1| flagellar basal body rod protein FlgF [Escherichia coli O157:H7
           str. EC4024]
 gi|208805942|ref|ZP_03248279.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC4206]
 gi|208815658|ref|ZP_03256837.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC4045]
 gi|208822437|ref|ZP_03262756.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC4042]
 gi|209397223|ref|YP_002269923.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC4115]
 gi|217328081|ref|ZP_03444163.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. TW14588]
 gi|254792459|ref|YP_003077296.1| flagellar basal body rod protein FlgF [Escherichia coli O157:H7
           str. TW14359]
 gi|261227018|ref|ZP_05941299.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli O157:H7 str. FRIK2000]
 gi|261256252|ref|ZP_05948785.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli O157:H7 str. FRIK966]
 gi|291282097|ref|YP_003498915.1| Flagellar basal-body rod protein FlgF [Escherichia coli O55:H7 str.
           CB9615]
 gi|12514615|gb|AAG55823.1|AE005317_12 flagellar biosynthesis, cell-proximal portion of basal-body rod
           [Escherichia coli O157:H7 str. EDL933]
 gi|13360919|dbj|BAB34878.1| flagellar rod protein flgF [Escherichia coli O157:H7 str. Sakai]
 gi|187770508|gb|EDU34352.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC4196]
 gi|188018201|gb|EDU56323.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC4113]
 gi|189354581|gb|EDU73000.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC4401]
 gi|189363129|gb|EDU81548.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC4486]
 gi|189365533|gb|EDU83949.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC4501]
 gi|189370455|gb|EDU88871.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC869]
 gi|189375940|gb|EDU94356.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC508]
 gi|208725743|gb|EDZ75344.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC4206]
 gi|208732306|gb|EDZ80994.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC4045]
 gi|208737922|gb|EDZ85605.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC4042]
 gi|209158623|gb|ACI36056.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC4115]
 gi|209773368|gb|ACI84996.1| flagellar rod protein flgF [Escherichia coli]
 gi|209773370|gb|ACI84997.1| flagellar rod protein flgF [Escherichia coli]
 gi|209773372|gb|ACI84998.1| flagellar rod protein flgF [Escherichia coli]
 gi|209773374|gb|ACI84999.1| flagellar rod protein flgF [Escherichia coli]
 gi|209773376|gb|ACI85000.1| flagellar rod protein flgF [Escherichia coli]
 gi|217318508|gb|EEC26934.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. TW14588]
 gi|254591859|gb|ACT71220.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli O157:H7 str. TW14359]
 gi|290761970|gb|ADD55931.1| Flagellar basal-body rod protein FlgF [Escherichia coli O55:H7 str.
           CB9615]
 gi|320189760|gb|EFW64416.1| Flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. EC1212]
 gi|320637528|gb|EFX07328.1| flagellar basal body rod protein FlgF [Escherichia coli O157:H7
           str. G5101]
 gi|320643089|gb|EFX12290.1| flagellar basal body rod protein FlgF [Escherichia coli O157:H-
           str. 493-89]
 gi|320648547|gb|EFX17202.1| flagellar basal body rod protein FlgF [Escherichia coli O157:H-
           str. H 2687]
 gi|320653861|gb|EFX21935.1| flagellar basal body rod protein FlgF [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320659341|gb|EFX26910.1| flagellar basal body rod protein FlgF [Escherichia coli O55:H7 str.
           USDA 5905]
 gi|326339299|gb|EGD63113.1| Flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. 1125]
 gi|326344740|gb|EGD68488.1| Flagellar basal-body rod protein FlgF [Escherichia coli O157:H7
           str. 1044]
          Length = 251

 Score =  118 bits (294), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 83/252 (32%), Gaps = 16/252 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   ++       + V 
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G    T   LD AL+ D W A+++       TR+G  +V   G L     
Sbjct: 59  ASTPGADITPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
            +PV+  A         +              G    T+        V  +   V+R + 
Sbjct: 117 GHPVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176

Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           GI              L+    + V  G LE SN N++  M  MI   ++F     +I  
Sbjct: 177 GIFRLSAETQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236

Query: 230 NEKSMLEAIRNI 241
            + +   A   +
Sbjct: 237 VDDNAGRA-NQL 247


>gi|86157778|ref|YP_464563.1| flagellar basal body rod protein [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85774289|gb|ABC81126.1| flagellar basal body rod protein [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 235

 Score =  118 bits (294), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 54/239 (22%), Positives = 88/239 (36%), Gaps = 11/239 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + +   +A  ++L  VADN++N  T GF+  +  F   +        Q   + A
Sbjct: 1   MADGIYVSMCGAVARAEQLDAVADNLANAQTPGFKAARPAFESFLAP---GAAQDKRYAA 57

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119
           +    +    G    TG  LD   E   + A+ +       TRDGR  +  D  LVS   
Sbjct: 58  AVASGVDLRPGPTQRTGNALDVVPEAGLFLAVRTAGGATAYTRDGRLTLDADRRLVS--- 114

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
               L  A     +   D    V   G +      +AT+GL  +D      R   S ++P
Sbjct: 115 DGRPLLSAQGEPIVLPPDLDARVDAAGRVWAGDVEVATLGLARLDGPVD--RVGPSLLAP 172

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
                 L   S   V+ G LE  NA ++    Q++   + + +    I    +    A+
Sbjct: 173 GAGGRALP--SEGAVRSGELELGNAGALEASIQLVAAQRAYEASLQAIQTYRQLDQRAV 229


>gi|110641253|ref|YP_668983.1| flagellar basal body rod protein FlgF [Escherichia coli 536]
 gi|191172387|ref|ZP_03033928.1| flagellar basal-body rod protein FlgF [Escherichia coli F11]
 gi|300982620|ref|ZP_07176204.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 200-1]
 gi|110342845|gb|ABG69082.1| flagellar basal-body rod protein FlgF [Escherichia coli 536]
 gi|190907271|gb|EDV66869.1| flagellar basal-body rod protein FlgF [Escherichia coli F11]
 gi|300307085|gb|EFJ61605.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 200-1]
 gi|324013351|gb|EGB82570.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 60-1]
          Length = 251

 Score =  118 bits (294), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 49/252 (19%), Positives = 82/252 (32%), Gaps = 16/252 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   ++       + V 
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G    T   LD AL+ D W  +++       TR+G  +V   G L     
Sbjct: 59  ASTPGADMTPGKMDYTSRPLDVALQQDGWLVVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
            +PV+  A         +              G    T+        V  +   V+R + 
Sbjct: 117 GHPVVGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176

Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           GI              L+    + V  G LE SN N++  M  MI   ++F     +I  
Sbjct: 177 GIFRLSAESQARRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236

Query: 230 NEKSMLEAIRNI 241
            + +   A   +
Sbjct: 237 VDDNAGRA-NQL 247


>gi|193069514|ref|ZP_03050468.1| flagellar basal-body rod protein FlgF [Escherichia coli E110019]
 gi|192957262|gb|EDV87711.1| flagellar basal-body rod protein FlgF [Escherichia coli E110019]
          Length = 251

 Score =  118 bits (294), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 83/252 (32%), Gaps = 16/252 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   ++       + V 
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G    T   LD AL+ D W A+++       TR+G  +V   G L     
Sbjct: 59  ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
            +PV+  A         +              G    T+        V  +   V+R + 
Sbjct: 117 GHPVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176

Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           GI              L+    + V  G LE SN N++  M  MI   ++F     +I  
Sbjct: 177 GIFRLSAETQATRGPILQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236

Query: 230 NEKSMLEAIRNI 241
            + +   A   +
Sbjct: 237 VDDNAGRA-NQL 247


>gi|16129040|ref|NP_415595.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli str. K-12 substr. MG1655]
 gi|89107923|ref|AP_001703.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli str. K-12 substr. W3110]
 gi|110805094|ref|YP_688614.1| flagellar basal body rod protein FlgF [Shigella flexneri 5 str.
           8401]
 gi|170080728|ref|YP_001730048.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli str. K-12 substr. DH10B]
 gi|188495735|ref|ZP_03003005.1| flagellar basal-body rod protein FlgF [Escherichia coli 53638]
 gi|194438118|ref|ZP_03070211.1| flagellar basal-body rod protein FlgF [Escherichia coli 101-1]
 gi|209918331|ref|YP_002292415.1| flagellar basal body rod protein FlgF [Escherichia coli SE11]
 gi|218694611|ref|YP_002402278.1| flagellar basal body rod protein FlgF [Escherichia coli 55989]
 gi|238900331|ref|YP_002926127.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli BW2952]
 gi|253773899|ref|YP_003036730.1| flagellar basal body rod protein FlgF [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254161183|ref|YP_003044291.1| flagellar basal body rod protein FlgF [Escherichia coli B str.
           REL606]
 gi|256023225|ref|ZP_05437090.1| flagellar basal body rod protein FlgF [Escherichia sp. 4_1_40B]
 gi|297517865|ref|ZP_06936251.1| flagellar basal body rod protein FlgF [Escherichia coli OP50]
 gi|300821142|ref|ZP_07101291.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 119-7]
 gi|300902468|ref|ZP_07120450.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 84-1]
 gi|300950172|ref|ZP_07164117.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 116-1]
 gi|301029708|ref|ZP_07192762.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 196-1]
 gi|301304984|ref|ZP_07211086.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 124-1]
 gi|301644989|ref|ZP_07244955.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 146-1]
 gi|307137712|ref|ZP_07497068.1| flagellar basal body rod protein FlgF [Escherichia coli H736]
 gi|331641621|ref|ZP_08342756.1| flagellar basal-body rod protein FlgF [Escherichia coli H736]
 gi|331667477|ref|ZP_08368341.1| flagellar basal-body rod protein FlgF [Escherichia coli TA271]
 gi|331676868|ref|ZP_08377564.1| flagellar basal-body rod protein FlgF [Escherichia coli H591]
 gi|2494531|sp|P75938|FLGF_ECOLI RecName: Full=Flagellar basal-body rod protein flgF; AltName:
           Full=Putative proximal rod protein
 gi|1787317|gb|AAC74161.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli str. K-12 substr. MG1655]
 gi|4062655|dbj|BAA35886.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli str. K12 substr. W3110]
 gi|110614642|gb|ABF03309.1| flagellar basal-body rod protein FlgF [Shigella flexneri 5 str.
           8401]
 gi|169888563|gb|ACB02270.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli str. K-12 substr. DH10B]
 gi|188490934|gb|EDU66037.1| flagellar basal-body rod protein FlgF [Escherichia coli 53638]
 gi|194423054|gb|EDX39048.1| flagellar basal-body rod protein FlgF [Escherichia coli 101-1]
 gi|209911590|dbj|BAG76664.1| flagellar basal-body rod protein FlgF [Escherichia coli SE11]
 gi|218351343|emb|CAU97049.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli 55989]
 gi|238861103|gb|ACR63101.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli BW2952]
 gi|242376881|emb|CAQ31598.1| flagellar basal-body rod protein FlgF, subunit of Flagellar Motor
           Complex and Flagellum [Escherichia coli BL21(DE3)]
 gi|253324943|gb|ACT29545.1| flagellar basal-body rod protein FlgF [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253973084|gb|ACT38755.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli B str. REL606]
 gi|253977298|gb|ACT42968.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli BL21(DE3)]
 gi|260449783|gb|ACX40205.1| flagellar basal-body rod protein FlgF [Escherichia coli DH1]
 gi|299877396|gb|EFI85607.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 196-1]
 gi|300405500|gb|EFJ89038.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 84-1]
 gi|300450519|gb|EFK14139.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 116-1]
 gi|300526441|gb|EFK47510.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 119-7]
 gi|300839702|gb|EFK67462.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 124-1]
 gi|301076718|gb|EFK91524.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 146-1]
 gi|309701349|emb|CBJ00650.1| flagellar basal-body rod protein FlgF [Escherichia coli ETEC
           H10407]
 gi|315135709|dbj|BAJ42868.1| flagellar basal body rod protein FlgF [Escherichia coli DH1]
 gi|315253878|gb|EFU33846.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 85-1]
 gi|323937817|gb|EGB34081.1| flagellar basal-body rod protein FlgF [Escherichia coli E1520]
 gi|323942546|gb|EGB38713.1| flagellar basal-body rod protein FlgF [Escherichia coli E482]
 gi|323962676|gb|EGB58254.1| flagellar basal-body rod protein FlgF [Escherichia coli H489]
 gi|323973334|gb|EGB68523.1| flagellar basal-body rod protein FlgF [Escherichia coli TA007]
 gi|324017419|gb|EGB86638.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 117-3]
 gi|331038419|gb|EGI10639.1| flagellar basal-body rod protein FlgF [Escherichia coli H736]
 gi|331065062|gb|EGI36957.1| flagellar basal-body rod protein FlgF [Escherichia coli TA271]
 gi|331075557|gb|EGI46855.1| flagellar basal-body rod protein FlgF [Escherichia coli H591]
 gi|332342623|gb|AEE55957.1| flagellar basal-body rod protein FlgF [Escherichia coli UMNK88]
          Length = 251

 Score =  118 bits (294), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 83/252 (32%), Gaps = 16/252 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   ++       + V 
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G    T   LD AL+ D W A+++       TR+G  +V   G L     
Sbjct: 59  ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
            +PV+  A         +              G    T+        V  +   V+R + 
Sbjct: 117 GHPVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176

Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           GI              L+    + V  G LE SN N++  M  MI   ++F     +I  
Sbjct: 177 GIFRLSAETQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236

Query: 230 NEKSMLEAIRNI 241
            + +   A   +
Sbjct: 237 VDDNAGRA-NQL 247


>gi|323947621|gb|EGB43625.1| flagellar basal-body rod protein FlgF [Escherichia coli H120]
          Length = 251

 Score =  118 bits (294), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 84/252 (33%), Gaps = 16/252 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   ++       + V 
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G    T   LD AL+ D W A+++       TR+G  +V   G L     
Sbjct: 59  ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
            +PV+  A         +              G    T+        V  +   V+R + 
Sbjct: 117 GHPVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176

Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           GI              L+    ++V  G LE SN N++  M  MI   ++F     +I  
Sbjct: 177 GIFRLSAESQATRGPILQADPTLSVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236

Query: 230 NEKSMLEAIRNI 241
            + +   A   +
Sbjct: 237 VDDNAGRA-NQL 247


>gi|239828562|ref|YP_002951186.1| hypothetical protein GWCH70_3280 [Geobacillus sp. WCH70]
 gi|239808855|gb|ACS25920.1| protein of unknown function DUF1078 domain protein [Geobacillus sp.
           WCH70]
          Length = 283

 Score =  118 bits (294), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 50/283 (17%), Positives = 100/283 (35%), Gaps = 41/283 (14%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S          L Q+L  +++N++N++T GF+  +  F E++     ++        
Sbjct: 1   MLRSMITAANTMAQLGQQLDVISNNIANSNTTGFKRRETNFGELLAQQFTNLPNDKATRL 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL------ESPRGIILTR 102
                +        +  L    G+   T   LD AL  +  F           + I  TR
Sbjct: 61  TPNGVRYGVGARLAETNLVLAQGALTKTDRALDVALAKEGQFFRVLVQGENGAQEIGYTR 120

Query: 103 DGRFK-----VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157
            G F         +  ++  S  +PVLD  + PI +P+  +   +   G I+        
Sbjct: 121 SGAFYLTPSAENPNELMLVTSDGHPVLDENNAPILLPEGFKNITISNNGTITAVASDGRV 180

Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----------------SGVTVKRGFLE 200
           M   ++ ++     +    +  NI   P  +                  + +++ +G LE
Sbjct: 181 MRRANIGITTILRPQLLQSVGDNIFTLPDLNALNVNETDVAVNMTGNLRNQISMTQGALE 240

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
            SN +   E+  M+   + +      I  +++ +   I  I S
Sbjct: 241 QSNVDLGAELTDMMITERSYQLNARAISLSDQMLG-LINGIRS 282


>gi|218553655|ref|YP_002386568.1| flagellar basal body rod protein FlgF [Escherichia coli IAI1]
 gi|218360423|emb|CAQ97977.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli IAI1]
          Length = 251

 Score =  118 bits (294), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 51/252 (20%), Positives = 84/252 (33%), Gaps = 16/252 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   ++       + V 
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G    T   LD AL+ D W A++S       TR+G  +V   G L     
Sbjct: 59  ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQSADGSEGYTRNGSIQVDPTGQL--TIQ 116

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
            +PV+  A         +              G +  T+        V  +   V+R + 
Sbjct: 117 GHPVIGEAGPIAVPEGAEITIAADGTISALNPGDLANTVAPVGRLKLVKATGSEVQRGDD 176

Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           GI              L+    + V  G LE SN N++  M  MI   ++F     +I  
Sbjct: 177 GIFRLSAESQATRGPILQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236

Query: 230 NEKSMLEAIRNI 241
            + +   A   +
Sbjct: 237 VDDNAGRA-NQL 247


>gi|320664476|gb|EFX31627.1| flagellar basal body rod protein FlgF [Escherichia coli O157:H7
           str. LSU-61]
          Length = 251

 Score =  117 bits (293), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 82/252 (32%), Gaps = 16/252 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   ++       + V 
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G    T   LD AL+ D W A+++       TR+G  +V   G L     
Sbjct: 59  ASTPGADITPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
            +PV+  A         +              G    T+        V      V+R + 
Sbjct: 117 GHPVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKARGSEVQRGDD 176

Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           GI              L+    + V  G LE SN N++  M  MI   ++F     +I  
Sbjct: 177 GIFRLSAETQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236

Query: 230 NEKSMLEAIRNI 241
            + +   A   +
Sbjct: 237 VDDNAGRA-NQL 247


>gi|26247217|ref|NP_753257.1| flagellar basal body rod protein FlgF [Escherichia coli CFT073]
 gi|91210229|ref|YP_540215.1| flagellar basal body rod protein FlgF [Escherichia coli UTI89]
 gi|117623263|ref|YP_852176.1| flagellar basal body rod protein FlgF [Escherichia coli APEC O1]
 gi|227886565|ref|ZP_04004370.1| flagellar basal body rod protein FlgF [Escherichia coli 83972]
 gi|237706937|ref|ZP_04537418.1| flagellar basal-body rod protein flgF [Escherichia sp. 3_2_53FAA]
 gi|300974381|ref|ZP_07172593.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 45-1]
 gi|301051139|ref|ZP_07197969.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 185-1]
 gi|26107618|gb|AAN79817.1|AE016759_91 Flagellar basal-body rod protein flgF [Escherichia coli CFT073]
 gi|91071803|gb|ABE06684.1| flagellar basal-body rod protein FlgF [Escherichia coli UTI89]
 gi|115512387|gb|ABJ00462.1| flagellar basal-body rod protein FlgF [Escherichia coli APEC O1]
 gi|226898147|gb|EEH84406.1| flagellar basal-body rod protein flgF [Escherichia sp. 3_2_53FAA]
 gi|227836769|gb|EEJ47235.1| flagellar basal body rod protein FlgF [Escherichia coli 83972]
 gi|294491134|gb|ADE89890.1| flagellar basal-body rod protein FlgF [Escherichia coli IHE3034]
 gi|300297160|gb|EFJ53545.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 185-1]
 gi|300410624|gb|EFJ94162.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 45-1]
 gi|307553079|gb|ADN45854.1| flagellar basal-body rod protein FlgF [Escherichia coli ABU 83972]
 gi|307627453|gb|ADN71757.1| flagellar basal body rod protein FlgF [Escherichia coli UM146]
 gi|315287368|gb|EFU46779.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 110-3]
 gi|315291071|gb|EFU50434.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 153-1]
 gi|320196441|gb|EFW71064.1| Flagellar basal-body rod protein FlgF [Escherichia coli WV_060327]
 gi|323953237|gb|EGB49103.1| flagellar basal-body rod protein FlgF [Escherichia coli H252]
 gi|323957901|gb|EGB53613.1| flagellar basal-body rod protein FlgF [Escherichia coli H263]
          Length = 251

 Score =  117 bits (293), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 83/252 (32%), Gaps = 16/252 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   ++       + V 
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G    T   LD AL+ D W A+++       TR+G  +V   G L     
Sbjct: 59  ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
            +PV+  A         +              G    T+        V  +   V+R + 
Sbjct: 117 GHPVVGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176

Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           GI              L+    + V  G LE SN N++  M  MI   ++F     +I  
Sbjct: 177 GIFRLSAESQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236

Query: 230 NEKSMLEAIRNI 241
            + +   A   +
Sbjct: 237 VDDNAGRA-NQL 247


>gi|22127326|ref|NP_670749.1| flagellar basal body rod protein FlgF [Yersinia pestis KIM 10]
 gi|45442797|ref|NP_994336.1| flagellar basal body rod protein FlgF [Yersinia pestis biovar
           Microtus str. 91001]
 gi|108809054|ref|YP_652970.1| flagellar basal body rod protein FlgF [Yersinia pestis Antiqua]
 gi|108810749|ref|YP_646516.1| flagellar basal body rod protein FlgF [Yersinia pestis Nepal516]
 gi|145597818|ref|YP_001161894.1| flagellar basal body rod protein FlgF [Yersinia pestis Pestoides F]
 gi|166212093|ref|ZP_02238128.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167399157|ref|ZP_02304681.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167425211|ref|ZP_02316964.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|229837409|ref|ZP_04457572.1| Flagellar basal-body rod protein flgF [Yersinia pestis Pestoides A]
 gi|229900946|ref|ZP_04516070.1| Flagellar basal-body rod protein flgF [Yersinia pestis Nepal516]
 gi|21960407|gb|AAM87000.1|AE013948_8 putative flagellar rod protein [Yersinia pestis KIM 10]
 gi|45437663|gb|AAS63213.1| putative flagellar rod protein [Yersinia pestis biovar Microtus
           str. 91001]
 gi|108774397|gb|ABG16916.1| hypothetical protein YPN_0584 [Yersinia pestis Nepal516]
 gi|108780967|gb|ABG15025.1| hypothetical protein YPA_3063 [Yersinia pestis Antiqua]
 gi|145209514|gb|ABP38921.1| hypothetical protein YPDSF_0510 [Yersinia pestis Pestoides F]
 gi|166206839|gb|EDR51319.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167051661|gb|EDR63069.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167055974|gb|EDR65755.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|229682285|gb|EEO78377.1| Flagellar basal-body rod protein flgF [Yersinia pestis Nepal516]
 gi|229705532|gb|EEO91542.1| Flagellar basal-body rod protein flgF [Yersinia pestis Pestoides A]
 gi|320016710|gb|ADW00282.1| Flagellar basal-body rod protein flgF [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 243

 Score =  117 bits (293), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 50/244 (20%), Positives = 93/244 (38%), Gaps = 8/244 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       ++       +    A+N++N++T GFR            +          V 
Sbjct: 1   MDKLLYTAVSGANRSLSQQQIHANNLANSNTQGFRADLE--KATATQVMGGGYSSRVAVL 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           S    +     S   TG +LD AL+     A+ S      TR+G+  V+ +G  ++ +G 
Sbjct: 59  SQNAGVDMTPASLQETGRDLDIALKNQGLIAVLSGGREAYTRNGQMDVSAEG-ALTINGL 117

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSGI 177
             + D   + +       I + G    I Q G +     +     VD+    +R+ N G+
Sbjct: 118 PVLGDGGPIVLPPYSALSIADDGTIAIIPQAGGIKTPEEIERIKLVDIPANQLRKNNRGL 177

Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
             +    P      V V    LE SN +++ EM   I L+++F +   ++   E  + +A
Sbjct: 178 LVSNRG-PAARDETVQVVNKHLESSNVSAISEMIASISLSRQFEAQIKMMKVAED-LAQA 235

Query: 238 IRNI 241
              +
Sbjct: 236 GNRM 239


>gi|315296708|gb|EFU56003.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 16-3]
          Length = 251

 Score =  117 bits (293), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 83/252 (32%), Gaps = 16/252 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   ++       + V 
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G    T   LD AL+ D W A+++       TR+G  +V   G L     
Sbjct: 59  ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
            +PV+  A         +              G    T+        V  +   V+R + 
Sbjct: 117 GHPVVGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176

Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           GI              L+    + V  G LE SN N++  M  MI   ++F     +I  
Sbjct: 177 GIFRLSAESQARRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236

Query: 230 NEKSMLEAIRNI 241
            + +   A   +
Sbjct: 237 VDDNAGRA-NQL 247


>gi|158321570|ref|YP_001514077.1| flagellar basal body rod protein [Alkaliphilus oremlandii OhILAs]
 gi|158141769|gb|ABW20081.1| flagellar basal body rod protein [Alkaliphilus oremlandii OhILAs]
          Length = 357

 Score =  117 bits (293), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 41/197 (20%), Positives = 91/197 (46%), Gaps = 4/197 (2%)

Query: 46  GAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGR 105
              ++ I          + +++   G+   TG+ L+FA++G  +F +++P G + TR+G 
Sbjct: 163 RPAQDVIGTINGGKRFERTHVNFLQGTLEETGSPLNFAIDGTGFFRVQTPEGPMYTRNGS 222

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           F +  +G+LV+A G   +         I   ++ F V E G++   G+++  + +  +  
Sbjct: 223 FSLGPNGNLVTAEGYLLL----GQNGPINVGNQEFQVKENGQVIVAGQLVNQISMTDISN 278

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225
                +   S           E      V +GFLE SN +++ EM +MI   + + + + 
Sbjct: 279 LNSLDKFGQSYYIVREGLEVEETPFTGEVLQGFLEGSNISTIDEMVKMISTMRSYEASSK 338

Query: 226 LIDENEKSMLEAIRNIA 242
           ++   ++ + +A+ +I 
Sbjct: 339 MVKAYDEMLQKAVNDIG 355



 Score = 82.2 bits (201), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 63/204 (30%), Gaps = 17/204 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDIDQKIS 57
           M       +++    ++ L   ++NM+N +T GF+   +    F EV+    N       
Sbjct: 1   MFRGLYTAVSSMQTNQRMLDITSNNMANVNTTGFKKDVLVAETFPEVLIKKING------ 54

Query: 58  FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSA 117
                 + +       I    E         +F +E P G   +RD +F V +DG L + 
Sbjct: 55  --EIPNQTIKLNGNLDIDRDGEGYILSTERGFFTVEGPMGKSYSRDLKFTVDEDGYLRTY 112

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ-GFVRRENSG 176
                                +   G +  +      I   G  +        + R    
Sbjct: 113 GR-----TSGGEIDWTEGNFVLSGQGTRIRVDNNNVQIDQRGRITAGGGAMDLIHRPAQD 167

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLE 200
           +   I      + + V   +G LE
Sbjct: 168 VIGTINGGKRFERTHVNFLQGTLE 191


>gi|323976550|gb|EGB71638.1| flagellar basal-body rod protein FlgF [Escherichia coli TW10509]
          Length = 251

 Score =  117 bits (293), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 83/252 (32%), Gaps = 16/252 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   ++       + V 
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G    T   LD AL+ D W A+++       TR+G  +V   G L     
Sbjct: 59  ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTDDGSEGYTRNGSIQVDPTGQL--TIQ 116

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
            +PV+  A         +              G    T+        V  +   V+R + 
Sbjct: 117 GHPVIGEAGPIAVPEGAEITVAADGTISALNSGDPANTVAPVGRLKLVKATGSEVQRGDD 176

Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           GI              L+    + V  G LE SN N++  M  MI   ++F     +I  
Sbjct: 177 GIFRLSAESQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236

Query: 230 NEKSMLEAIRNI 241
            + +   A   +
Sbjct: 237 VDDNAGRA-NQL 247


>gi|187932642|ref|YP_001885066.1| flagellar basal body rod protein FlgG [Clostridium botulinum B str.
           Eklund 17B]
 gi|187720795|gb|ACD22016.1| flagellar hook-basal body complex protein [Clostridium botulinum B
           str. Eklund 17B]
          Length = 257

 Score =  117 bits (293), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 49/256 (19%), Positives = 99/256 (38%), Gaps = 14/256 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVV----------GA 47
           M   F   ++  + LE    TV +N+ N +  G++   +    F +V+            
Sbjct: 1   MIRGFYTAVSGLITLENEQQTVTNNIVNVNNNGYKKNTLTKQSFEDVMITNRQNKVGNRH 60

Query: 48  IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107
           I N +      V           G+F ST +  DF ++G  +F ++     + TR G FK
Sbjct: 61  IPNKLGNLNLGVKVNDVSTIYTQGAFKSTDSNTDFGIDGRGFFTVQRGNERLFTRSGDFK 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           +   G L++ +G Y +    +   + P           G  + +     +          
Sbjct: 121 IDQQGYLITGNGDYVLGRNNATGAEEPIYVGKDEFSLDGNNNLQSAAGESTHTLLTADFT 180

Query: 168 GFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
            +   E  G +      P+   + V V++G LE SN N   E+ +++ + ++F +    +
Sbjct: 181 EYAPLEKVGDNYYKGDNPV-YNAVVNVRQGVLETSNVNPTEELVKLMEIKRQFETNQKFV 239

Query: 228 DENEKSMLEAIRNIAS 243
              ++++ +A   I S
Sbjct: 240 SMQDETVQKAANEIGS 255


>gi|322435953|ref|YP_004218165.1| flagellar hook-basal body protein [Acidobacterium sp. MP5ACTX9]
 gi|321163680|gb|ADW69385.1| flagellar hook-basal body protein [Acidobacterium sp. MP5ACTX9]
          Length = 251

 Score =  117 bits (293), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 49/248 (19%), Positives = 96/248 (38%), Gaps = 10/248 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M +         LA  Q L T A+N++N  T GFR  +  FS V+ +      Q      
Sbjct: 1   MDSGLYAAYTGLLARTQALDTAANNLANASTNGFRAQRDSFSGVLASGLAAGQQGSQVGV 60

Query: 61  SGKEYL-------SKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113
               Y         +  G  ++T   LD A+ G  +FA+ +  G+  TRDG F ++  G 
Sbjct: 61  GINSYGVLGGSSADQSQGPMVTTSNPLDVAINGTGFFAIRTAHGVRYTRDGAFTLSAQGQ 120

Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK-VIATMGLYSVDMSQGFVRR 172
           L + +G+  +    +       + +I   G     +  G  V+  +G++    + G  + 
Sbjct: 121 LQTGAGEPVLNTAMAPITLPSGEVQISGDGTVAVQTAAGSGVVGQLGIFDFASTAGLTQE 180

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
             +         P    +   VK+G +E +N +S++   Q++ + ++   +   +     
Sbjct: 181 GANRFKAPDDAVPTASTAM--VKQGAVEGANQDSVHGTMQLVLIQRQAEMMQKALSVFNA 238

Query: 233 SMLEAIRN 240
              +    
Sbjct: 239 DFDKTATE 246


>gi|191168482|ref|ZP_03030270.1| flagellar basal-body rod protein FlgF [Escherichia coli B7A]
 gi|190901501|gb|EDV61262.1| flagellar basal-body rod protein FlgF [Escherichia coli B7A]
          Length = 251

 Score =  117 bits (293), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 83/252 (32%), Gaps = 16/252 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   ++       + V 
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G    T   LD AL+ D W A+++       TR+G  +V   G L     
Sbjct: 59  ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
            +PV+  A         +              G    T+        V  +   V+R + 
Sbjct: 117 GHPVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176

Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           GI              L+    + V  G LE SN N++  M  MI   ++F     +I  
Sbjct: 177 GIFRLSAESQATRGPILQADPTLRVMPGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236

Query: 230 NEKSMLEAIRNI 241
            + +   A   +
Sbjct: 237 VDDNAGRA-NQL 247


>gi|328958264|ref|YP_004375650.1| putative flagellar basal-body rod protein [Carnobacterium sp. 17-4]
 gi|328674588|gb|AEB30634.1| putative flagellar basal-body rod protein [Carnobacterium sp. 17-4]
          Length = 252

 Score =  117 bits (293), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 47/256 (18%), Positives = 104/256 (40%), Gaps = 20/256 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV------------VGAI 48
           M  S          L+++   ++ N++N +T G+++ ++  S                  
Sbjct: 1   MIRSLTTLNNNFNILQKKQENISANVANINTSGYKSQEIIQSTRASEVMSNHLDGPFLNQ 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFK 107
           + DI          +   +   G   +T +  D A++GD +F +E+P G    TR+G F 
Sbjct: 61  QQDIGDFTFGNQIDEIAQNFSQGGLKATASPTDIAIQGDGFFTVEAPNGGNYYTRNGNFA 120

Query: 108 VTDDGSLVSASGKYPVLDMAS-VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           V D G LV+  G   +   A      I      F++  +G IS  G  +        + +
Sbjct: 121 VNDTGELVTQEGYRVLGTTAGGQSSPIQVNGTEFSIDNRGNISGTGMSLMVTE---FEDT 177

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
            G  R  ++             + G  +++ +LE SN  ++ E+  ++ ++++F +    
Sbjct: 178 AGLTRTGDTLF---TGQGGTVQIGGTVMQQSYLEASNVQTVDEITNLMQVSREFEANQKA 234

Query: 227 IDENEKSMLEAIRNIA 242
           +   ++++ +A+  + 
Sbjct: 235 LSAADETLRKAVNEVG 250


>gi|215486286|ref|YP_002328717.1| flagellar basal body rod protein FlgF [Escherichia coli O127:H6
           str. E2348/69]
 gi|306814074|ref|ZP_07448247.1| flagellar basal body rod protein FlgF [Escherichia coli NC101]
 gi|312968849|ref|ZP_07783056.1| flagellar basal-body rod protein FlgF [Escherichia coli 2362-75]
 gi|331657139|ref|ZP_08358101.1| flagellar basal-body rod protein FlgF [Escherichia coli TA206]
 gi|215264358|emb|CAS08715.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli O127:H6 str. E2348/69]
 gi|305852711|gb|EFM53159.1| flagellar basal body rod protein FlgF [Escherichia coli NC101]
 gi|312286251|gb|EFR14164.1| flagellar basal-body rod protein FlgF [Escherichia coli 2362-75]
 gi|331055387|gb|EGI27396.1| flagellar basal-body rod protein FlgF [Escherichia coli TA206]
          Length = 251

 Score =  117 bits (293), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 49/252 (19%), Positives = 82/252 (32%), Gaps = 16/252 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   ++       + V 
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G    T   LD AL+ D W A+++       TR+G  +V   G L     
Sbjct: 59  ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
            +PV+  A         +              G    T+        V  +   V+R + 
Sbjct: 117 GHPVVGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176

Query: 176 GISPNIPPTPLEDLS------GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           GI      +             + V  G LE SN N++  M  MI   ++F     +I  
Sbjct: 177 GIFRLSAESQATRGPVLLADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236

Query: 230 NEKSMLEAIRNI 241
            + +   A   +
Sbjct: 237 VDDNAGRA-NQL 247


>gi|330808196|ref|YP_004352658.1| flagellar basal-body rod protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327376304|gb|AEA67654.1| flagellar basal-body rod protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 245

 Score =  117 bits (293), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 47/246 (19%), Positives = 93/246 (37%), Gaps = 9/246 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + +             A+N++N  T GF+    +   +   +  D     +F  
Sbjct: 1   MDKYLYVAMTGASQNALAQRAHANNLANISTNGFQKDLEQARSM--PVFGDSFPARAFAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119
           S +       G+ + TG +LD A+ G  W A+++P G     R G   V   G L + +G
Sbjct: 59  SERPATDFTPGALVETGRDLDVAVSGPGWMAVQNPDGGESYVRTGSLNVDALGVLRAGNG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQ---KGKVIATMGLYSVDMSQGFVRRENSG 176
              + +   + +   QK EI   G     +       +     +  V+     + +   G
Sbjct: 119 MPVMGNGGPIAVPPEQKIEIGQDGTISIRAMGEGPRVMAEVDRIKLVNPDLKNMTKGLDG 178

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN---EKS 233
                   P    + V +  GF E SN N++ EM  ++ L ++F     +++     +++
Sbjct: 179 SIRTKDGQPAPIDANVQLVSGFQEASNVNAVDEMTSVLALAKQFELHVKMMNTAKEGDEA 238

Query: 234 MLEAIR 239
           M   ++
Sbjct: 239 MARVLQ 244


>gi|323174794|gb|EFZ60409.1| flagellar basal-body rod protein FlgF [Escherichia coli LT-68]
          Length = 251

 Score =  117 bits (293), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 83/252 (32%), Gaps = 16/252 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   ++       + V 
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G    T   LD AL+ D W A+++       TR+G  +V   G L     
Sbjct: 59  ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
            +PV+  A         +              G    T+        V  +   V+R + 
Sbjct: 117 GHPVIGEAGPIAMPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176

Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           GI              L+    + V  G LE SN N++  M  MI   ++F     +I  
Sbjct: 177 GIFRLSAETQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236

Query: 230 NEKSMLEAIRNI 241
            + +   A   +
Sbjct: 237 VDDNAGRA-NQL 247


>gi|187926953|ref|YP_001893298.1| flagellar basal-body rod protein FlgF [Ralstonia pickettii 12J]
 gi|241665282|ref|YP_002983641.1| flagellar basal-body rod protein FlgF [Ralstonia pickettii 12D]
 gi|187728707|gb|ACD29871.1| flagellar basal-body rod protein FlgF [Ralstonia pickettii 12J]
 gi|240867309|gb|ACS64969.1| flagellar basal-body rod protein FlgF [Ralstonia pickettii 12D]
          Length = 245

 Score =  117 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 50/244 (20%), Positives = 94/244 (38%), Gaps = 6/244 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  S  + +     L  + +  A+N++N  T GF+     F  V   ++ D     SFV 
Sbjct: 1   MDRSIYVSMTGVKHLFDQQAASANNLANASTTGFKAQIDAFHTV--GVQGDGSPTRSFVM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G   +TG  LD A++G  +FA+++P      TR G F++  DG++V+ SG
Sbjct: 59  ASAIGTDVTPGPIETTGRALDVAIDGQGYFAVQAPDGTEAYTRAGTFQLNPDGTIVTLSG 118

Query: 120 KYPVLDMASV--PIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177
           +  + D   +  P     +                  ++   L  V +    + R   G+
Sbjct: 119 QPVMGDGGPITLPPNTTVQFAKDGTVNAISADNVTPPVSLGRLKLVSIDPSNLDRGTDGL 178

Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                    +    V +  G LE SN N    +  MI ++++       +  ++ +   A
Sbjct: 179 FRQRDGQDADVNENVRITPGALEGSNVNLTDSLVNMIEISRQLEMQMKSLQTSDTNAQSA 238

Query: 238 IRNI 241
              +
Sbjct: 239 -NEL 241


>gi|307721136|ref|YP_003892276.1| flagellar hook-basal body protein [Sulfurimonas autotrophica DSM
           16294]
 gi|306979229|gb|ADN09264.1| flagellar hook-basal body protein [Sulfurimonas autotrophica DSM
           16294]
          Length = 273

 Score =  117 bits (292), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 56/270 (20%), Positives = 103/270 (38%), Gaps = 28/270 (10%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           MQT +    A  +    RL T+A+N++N +T GF+  ++   + +   K   D       
Sbjct: 1   MQTGYYSSAAGMVTQFNRLDTIANNLANVNTNGFKEDQLIVGDFMRLYKEARDELSNANN 60

Query: 54  ----------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDA-WFALESPRGIILTR 102
                                Y +  VG+   +   LDFAL  +  +FA+++P G+ LTR
Sbjct: 61  SKAGAAFLNRTMTRAPQIVDSYTNYSVGNMQKSSNSLDFALSQEGLFFAVKTPEGVRLTR 120

Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQ---------IPQKDEIFNVGEKGEISQKGK 153
           DG F + D+G L++  G   +        +         I + D+   +      S    
Sbjct: 121 DGAFTLNDEGKLITKQGYEVLPSDYQNSQEGISFATTDSIIEVDKNGQILTNVPNSASLV 180

Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQM 213
               + +   +  +  V+  ++        +         V++GF+E SN N++  M Q+
Sbjct: 181 QNKKLFIAQPESLKDLVKEGDNLYKLADINSLKSIEQSGAVRQGFVEKSNVNAVKMMTQL 240

Query: 214 IHLTQKFNSITTLIDEN-EKSMLEAIRNIA 242
           I   +        +D        +AI  IA
Sbjct: 241 IETNRLVGMYQKAMDTQMNDMNKDAIEKIA 270


>gi|284007174|emb|CBA72458.1| flagellar basal body rod protein FlgF [Arsenophonus nasoniae]
          Length = 248

 Score =  117 bits (292), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 42/247 (17%), Positives = 77/247 (31%), Gaps = 6/247 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       +       +  S + +N++N  T GF+      S  V    +   Q  +   
Sbjct: 1   MDHVIYTAMNGARHALETQSVITNNLANVSTNGFKAQLAA-SRFVPIEGSVGHQTRTLTI 59

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSA-- 117
           +      +  G+   T   LD  L    + A++ +      TR+G  +++ +G L+    
Sbjct: 60  ASTPGTDQRAGAMNYTARSLDVTLSDGGYLAVQLADGREAYTRNGNIQISANGELMIQNR 119

Query: 118 --SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
              G    + +         +D I           +   +  +        Q     E  
Sbjct: 120 PLMGDGGEIMVPPQAQLTIAEDGIITGYIPTAPPTQLGQVGQIKRVKPSAQQLVRGEEGL 179

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
                    PL   + V +  G LE SN N    M  MI   + F     +I     +  
Sbjct: 180 FHLAEPNAQPLVMDNSVKLLSGVLEGSNVNPAQAMVDMIANARTFEMQMKVIHSANDNAQ 239

Query: 236 EAIRNIA 242
            A + +A
Sbjct: 240 RANQLLA 246


>gi|28900123|ref|NP_799778.1| putative flagellar basal-body rod protein [Vibrio parahaemolyticus
           RIMD 2210633]
 gi|153837106|ref|ZP_01989773.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus
           AQ3810]
 gi|260365773|ref|ZP_05778269.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus
           K5030]
 gi|260880695|ref|ZP_05893050.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus
           AN-5034]
 gi|260897699|ref|ZP_05906195.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus
           Peru-466]
 gi|260899390|ref|ZP_05907785.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus
           AQ4037]
 gi|28808406|dbj|BAC61611.1| putative flagellar basal-body rod protein [Vibrio parahaemolyticus
           RIMD 2210633]
 gi|149749694|gb|EDM60439.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus
           AQ3810]
 gi|308086220|gb|EFO35915.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus
           Peru-466]
 gi|308092603|gb|EFO42298.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus
           AN-5034]
 gi|308109250|gb|EFO46790.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus
           AQ4037]
 gi|308115048|gb|EFO52588.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus
           K5030]
          Length = 243

 Score =  117 bits (292), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 91/242 (37%), Gaps = 4/242 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M +      +    + +     ++N+SN DT GFR    +   V   ++       + V 
Sbjct: 1   MDSLLFTATSGASRVLKAQHVRSNNLSNADTAGFRADMERVRSV--ELQGPGFDGRTMVV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +       + G  + TG  LD A+ G+ + A+E+P      TR G  ++   G++     
Sbjct: 59  TNSASTRFDSGDVVKTGRALDVAVMGEGYLAVETPAGNEAYTRAGNIQIDTFGAMSINGF 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                +   V     + +              G  IA   L  V      +++E+  +  
Sbjct: 119 PVVGENGPLVVPDYQKIEISERGLVSVIPPGGGAEIAVGTLKLVKPEINQLQKESDSLLH 178

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           ++   P      V +    +E SN +++ E+  ++ LT+ F     ++    +++ +A  
Sbjct: 179 SVDGVPFAADETVQLAPEHIEGSNVSAIDELIGVMSLTRNFEMQVRMMKTA-ETLAQAGN 237

Query: 240 NI 241
            +
Sbjct: 238 KL 239


>gi|300716219|ref|YP_003741022.1| flagellar basal-body rod protein [Erwinia billingiae Eb661]
 gi|299062055|emb|CAX59171.1| Flagellar basal-body rod protein [Erwinia billingiae Eb661]
          Length = 251

 Score =  117 bits (292), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 45/251 (17%), Positives = 86/251 (34%), Gaps = 14/251 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A     ++ +  A N++N  T GFR        V   ++       + V 
Sbjct: 1   MDHAIYTAMGAASQTLEQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         GS   T   LD A+  D W ++ +P      TR+G  ++   G  ++  G
Sbjct: 59  ASTPGADTSQGSLDYTERPLDVAVREDGWLSVRAPDGTEAYTRNGNMELNPAG-QLTIQG 117

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI-- 177
              + D   + +    +  I   G    ++      AT+ L  + + +        G   
Sbjct: 118 NLVMGDGGPIAVPQGSEVTIAADGSITALNPGDPPNATVQLGRLKLVKAVGSEVTRGDDG 177

Query: 178 -------SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
                  +       L+    + V  G LE SN   +  M  MI   ++F     +I   
Sbjct: 178 LFRLTATAQAQRGAVLQTDPTIQVMPGVLEGSNVKPVETMVDMIANARRFEMQMKVISSV 237

Query: 231 EKSMLEAIRNI 241
           +++   A   +
Sbjct: 238 DENEQRA-NQL 247


>gi|323490137|ref|ZP_08095357.1| flagellar hook-basal body protein [Planococcus donghaensis MPA1U2]
 gi|323396185|gb|EGA89011.1| flagellar hook-basal body protein [Planococcus donghaensis MPA1U2]
          Length = 280

 Score =  117 bits (292), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 50/280 (17%), Positives = 101/280 (36%), Gaps = 41/280 (14%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV--------------G 46
           M    N        L+++L  + +N++N +T G++  +  FS+ +              G
Sbjct: 1   MNIQMNTASNTMSELQKKLDLIGNNIANVNTNGYKRQEASFSDALVLSLEKQVGQKNEVG 60

Query: 47  AIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA-WFALESPRGIILTRDGR 105
            I  +  +  +     +  +  + GS   TG  LDF ++G++ +F + S    + T+DG 
Sbjct: 61  RITPNGLRIGAGAILSQTAVRNDQGSIKETGRPLDFMVQGESAYFRIASDGETLYTKDGS 120

Query: 106 FKVTDDGS-----LVSASGKYPVLDMASVP-------------------IQIPQKDEIFN 141
           F+V    +     LV+A+G   +                                 +   
Sbjct: 121 FQVQPILNSTQVGLVTANGDAVLGADNQPIVFDADFENIRLNGQGTLEISYKDSDKQPTE 180

Query: 142 VGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLED 201
           +        +   +A +G     ++     +  +G    I  +   D +   +K+ FLE 
Sbjct: 181 IQMGVAQINRQDSLAKIGENRFRLNGTEAEQLANGNLQFIDLSQPNDGAI-QIKQNFLEM 239

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           SN +   EM ++I   + F S    I   +  M   +  I
Sbjct: 240 SNVDLSDEMTELITTQRLFQSQGRAISYADDMMG-LVNTI 278


>gi|156934439|ref|YP_001438355.1| flagellar basal body rod protein FlgF [Cronobacter sakazakii ATCC
           BAA-894]
 gi|156532693|gb|ABU77519.1| hypothetical protein ESA_02270 [Cronobacter sakazakii ATCC BAA-894]
          Length = 252

 Score =  117 bits (292), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 49/253 (19%), Positives = 85/253 (33%), Gaps = 17/253 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + S  A N++N  T GFR        V   ++       + V 
Sbjct: 1   MDHAIYTAMGAASQTLNQQSVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEG-DAWFALESPR-GIILTRDGRFKVTD------DG 112
           +    ++   GS   T   LD A++G D W A+++P      TR+G  + T        G
Sbjct: 59  ASTPGVNMSQGSLDYTSRPLDVAIQGSDGWLAVQAPDGTEAYTRNGNIQRTATGQLTIQG 118

Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG----KVIATMGLYSVDMSQG 168
           + V   G   V+   +                    +       K++       V    G
Sbjct: 119 NPVMGEGGPVVVPEGAEVTIAADGTISVLNPGDAPNTIAPVGRLKMVKASAKEVVRGDDG 178

Query: 169 FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228
             R   +  +       L+    VT+  G LE SN   +  M  MI   ++F     +I 
Sbjct: 179 LFRL--NQQAQTARGATLQADPTVTLMSGVLEGSNVKPVEAMTDMIANARRFEMQMKIIT 236

Query: 229 ENEKSMLEAIRNI 241
             +++   A   +
Sbjct: 237 SVDENEQRA-NQL 248


>gi|218557959|ref|YP_002390872.1| flagellar basal body rod protein FlgF [Escherichia coli S88]
 gi|218364728|emb|CAR02418.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli S88]
          Length = 251

 Score =  116 bits (291), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 82/252 (32%), Gaps = 16/252 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   ++       + V 
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G    T   LD AL+ D W A+++       TR+G  +V   G L     
Sbjct: 59  ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
            +PV+  A         +              G    T+        V  +   V+R + 
Sbjct: 117 GHPVVGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176

Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           GI              L+    + V  G LE SN N++  M  MI   + F     +I  
Sbjct: 177 GIFRLSAESQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARCFEMQMKVISS 236

Query: 230 NEKSMLEAIRNI 241
            + +   A   +
Sbjct: 237 VDDNAGRA-NQL 247


>gi|310816830|ref|YP_003964794.1| flagellar basal-body rod protein FlgF, putative [Ketogulonicigenium
           vulgare Y25]
 gi|308755565|gb|ADO43494.1| flagellar basal-body rod protein FlgF, putative [Ketogulonicigenium
           vulgare Y25]
          Length = 237

 Score =  116 bits (291), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 66/239 (27%), Positives = 112/239 (46%), Gaps = 6/239 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    L  Q  L   +  +A+N++N +T G+R   V FSE V  +           A
Sbjct: 1   MDNTGYASLTRQTGLLHEMRAIANNIANANTTGYRAEGVAFSEYVVRLGPQSQSLSLATA 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
             ++      G   +TG   D A+EG+ +F ++ P G +LTR G F +  DG L+SA G 
Sbjct: 61  RVRQT-DFSQGDIGATGASFDLAIEGEGFFMIDHPEGPMLTRAGAFTLGPDGVLLSADGY 119

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
            P+LD    P+ IP +     +G  G IS  G VI  +GL++        R   +G   +
Sbjct: 120 -PLLDAGEAPVMIPAEAGPVLIGADGTISAGGDVIGQIGLFTPTDPLSVTRTSGTGFFSD 178

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
                LE      +++G LE SN N++ ++ +MI + + +    +L D  ++ +   ++
Sbjct: 179 DNMPYLE----GQIRQGHLEGSNVNAIAQIARMIEVQRAYEFGQSLADREDERIRSTVQ 233


>gi|324007917|gb|EGB77136.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 57-2]
          Length = 251

 Score =  116 bits (291), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 83/252 (32%), Gaps = 16/252 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   ++       + V 
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G    T   LD AL+ D W A+++       TR+G  +V   G L     
Sbjct: 59  ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
            +PV+  A         +              G    T+ L      V  +   V+R + 
Sbjct: 117 GHPVVGEAGPIAVPEGAEITIAADGTISALNPGDPANTVALVGRLKLVKATGSEVQRGDD 176

Query: 176 GISPNIPPTPLEDLS------GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           GI      +             + V  G LE SN N++  M  MI   ++F     +I  
Sbjct: 177 GIFRLSAESQATRGPVLLADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236

Query: 230 NEKSMLEAIRNI 241
            + +   A   +
Sbjct: 237 VDDNAGRA-NQL 247


>gi|328470102|gb|EGF41013.1| putative flagellar basal-body rod protein [Vibrio parahaemolyticus
           10329]
          Length = 243

 Score =  116 bits (291), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 90/242 (37%), Gaps = 4/242 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M +      +    + +     ++N+SN DT GFR    +   V   ++       + V 
Sbjct: 1   MDSLLFTATSGASRVLKAQHVRSNNLSNADTAGFRADMERVRSV--ELQGPGFDGRTMVV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +       +    + TG  LD A+ G+ + A+E+P      TR G  ++   G++     
Sbjct: 59  TNSASTRFDSADVVKTGRALDVAVMGEGYLAVETPAGNEAYTRAGNIQIDTFGAMSINGF 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                +   V     + +              G  IA   L  V      +++E+  +  
Sbjct: 119 PVVGENGPLVVPDYQKIEISERGLVSVIPPGGGAEIAVGTLKLVKPEINQLQKESDSLLH 178

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           ++   P      V +    +E SN +++ E+  ++ LT+ F     ++    +++ +A  
Sbjct: 179 SVDGVPFAADETVQLAPEHIEGSNVSAIDELIGVMSLTRNFEMQVRMMKTA-ETLAQAGN 237

Query: 240 NI 241
            +
Sbjct: 238 KL 239


>gi|293409443|ref|ZP_06653019.1| flagellar basal-body rod protein FlgF [Escherichia coli B354]
 gi|291469911|gb|EFF12395.1| flagellar basal-body rod protein FlgF [Escherichia coli B354]
          Length = 251

 Score =  116 bits (291), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 49/252 (19%), Positives = 83/252 (32%), Gaps = 16/252 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   ++       + V 
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G    T   +D AL+ D W A+++       TR+G  +V   G L     
Sbjct: 59  ASTPGADMTPGKMDYTSRPMDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
            +PV+  A         +              G    T+        V  +   V+R + 
Sbjct: 117 GHPVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176

Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           GI              L+    + V  G LE SN N++  M  MI   ++F     +I  
Sbjct: 177 GIFRLSAESQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236

Query: 230 NEKSMLEAIRNI 241
            + +   A   +
Sbjct: 237 VDDNAGRA-NQL 247


>gi|162421354|ref|YP_001604846.1| flagellar basal body rod protein FlgF [Yersinia pestis Angola]
 gi|162354169|gb|ABX88117.1| flagellar basal-body rod protein FlgF [Yersinia pestis Angola]
          Length = 243

 Score =  116 bits (291), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 49/247 (19%), Positives = 86/247 (34%), Gaps = 14/247 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       ++       +    A+N++N++T GFR            +          V 
Sbjct: 1   MDKLLYTAVSGANRSLSQQQIHANNLANSNTQGFRADLE--KATATQVMGGGYSSRVAVL 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTD------DGSL 114
           S    +     S   TG +LD AL+     A+ S      TR+G+  V+       +G  
Sbjct: 59  SQNAGVDMTPASLQETGRDLDIALKNQGLIAVLSGGREAYTRNGQMDVSAEGALTINGLP 118

Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174
           V   G   VL   S                 G  + +        +  VD+    +R+ N
Sbjct: 119 VLGDGGPIVLPPYSALSIADDGTIAIIPQAGGSKTPEEI----ERIKLVDIPANQLRKNN 174

Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
            G+  +    P      V V    LE SN +++ EM   I L+++F +   ++   E  +
Sbjct: 175 RGLLVSNRG-PAARDETVQVVNKHLESSNVSAISEMIASISLSRQFEAQIKMMKVAED-L 232

Query: 235 LEAIRNI 241
            +A   +
Sbjct: 233 AQAGNRM 239


>gi|82544457|ref|YP_408404.1| flagellar basal body rod protein FlgF [Shigella boydii Sb227]
 gi|187731130|ref|YP_001880751.1| flagellar basal body rod protein FlgF [Shigella boydii CDC 3083-94]
 gi|81245868|gb|ABB66576.1| cell-proximal portion of basal-body rod [Shigella boydii Sb227]
 gi|187428122|gb|ACD07396.1| flagellar basal-body rod protein FlgF [Shigella boydii CDC 3083-94]
 gi|320186976|gb|EFW61689.1| Flagellar basal-body rod protein FlgF [Shigella flexneri CDC
           796-83]
 gi|332094101|gb|EGI99153.1| flagellar basal-body rod protein FlgF [Shigella boydii 3594-74]
          Length = 251

 Score =  116 bits (291), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 49/252 (19%), Positives = 82/252 (32%), Gaps = 16/252 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   ++       + V 
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G    T   LD AL+ D W A+++       TR+G  +V   G L     
Sbjct: 59  ASTPGADMTPGKIDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
            + V+  A         +              G    T+        V  +   V+R + 
Sbjct: 117 GHQVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176

Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           GI              L+    + V  G LE SN N++  M  MI   ++F     +I  
Sbjct: 177 GIFRLSAETQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236

Query: 230 NEKSMLEAIRNI 241
            + +   A   +
Sbjct: 237 VDDNAGRA-NQL 247


>gi|300954383|ref|ZP_07166837.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 175-1]
 gi|300318619|gb|EFJ68403.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 175-1]
          Length = 251

 Score =  116 bits (291), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 83/252 (32%), Gaps = 16/252 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   ++       + V 
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G    T   LD AL+ D W A+++       TR+G  +V   G L     
Sbjct: 59  ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
            +PV+  A         +              G    T+        V  +   V+R + 
Sbjct: 117 GHPVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176

Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           GI              L+    + V  G LE SN N++  M  MI   ++F     +I  
Sbjct: 177 GIFRLSAETQATRGPVLQADPTLRVMSGGLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236

Query: 230 NEKSMLEAIRNI 241
            + +   A   +
Sbjct: 237 VDDNAGRA-NQL 247


>gi|323967018|gb|EGB62444.1| flagellar basal-body rod protein FlgF [Escherichia coli M863]
 gi|327253476|gb|EGE65114.1| flagellar basal-body rod protein FlgF [Escherichia coli STEC_7v]
          Length = 251

 Score =  116 bits (291), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 49/252 (19%), Positives = 83/252 (32%), Gaps = 16/252 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   ++       + V 
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G    T   LD AL+ D W A+++       TR+G  +V   G L     
Sbjct: 59  ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
            +PV+  A         +              G    T+        V  +   V+R + 
Sbjct: 117 GHPVIGEAGPIAVPEGAEITVAADGTISALNSGDPANTVAPVGRLKLVKATGSEVQRGDD 176

Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           G+              L+    + V  G LE SN N++  M  MI   ++F     +I  
Sbjct: 177 GMFRLSAESQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236

Query: 230 NEKSMLEAIRNI 241
            + +   A   +
Sbjct: 237 VDDNAGRA-NQL 247


>gi|153831599|ref|ZP_01984266.1| flagellar basal-body rod protein FlgF [Vibrio harveyi HY01]
 gi|156976142|ref|YP_001447048.1| flagellar basal body rod protein [Vibrio harveyi ATCC BAA-1116]
 gi|148872109|gb|EDL70926.1| flagellar basal-body rod protein FlgF [Vibrio harveyi HY01]
 gi|156527736|gb|ABU72821.1| hypothetical protein VIBHAR_04913 [Vibrio harveyi ATCC BAA-1116]
          Length = 243

 Score =  116 bits (291), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 90/242 (37%), Gaps = 4/242 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M +      +    + +     ++N+SN DT GFR    +   V   ++       + V 
Sbjct: 1   MDSLLFTATSGASRVLKAQHVRSNNLSNADTAGFRADMERVRSV--ELQGAGFDGRTMVV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +       + G  + TG  LD A+ G+ +  +E+P      TR G  KV   G++     
Sbjct: 59  TNSAATRFDSGDIMKTGRPLDVAIMGEGYLTVETPIGNEAYTRAGNIKVDTFGAMSINGF 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                +   V     + +              G  +    L  V  +   +++E+  +  
Sbjct: 119 PVVGENGPIVVPDFQKIEISERGRVSVIPPGGGAEVEVGTLKMVKPAINQLQKESDSLLH 178

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           ++   P      V +    +E SN +++ E+  ++ LT+ F     ++    +++ +A  
Sbjct: 179 SVDGVPFPADETVQLSPEHIEGSNVSAIDELLSVMSLTRNFEMQVRMMKTA-ETLAQAGN 237

Query: 240 NI 241
            +
Sbjct: 238 KL 239


>gi|293414370|ref|ZP_06657019.1| flagellar basal-body rod protein FlgF [Escherichia coli B185]
 gi|291434428|gb|EFF07401.1| flagellar basal-body rod protein FlgF [Escherichia coli B185]
          Length = 251

 Score =  116 bits (291), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 83/252 (32%), Gaps = 16/252 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   ++       + V 
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G    T   LD AL+ D W A+++       TR+G  +V   G L     
Sbjct: 59  ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
            +PV+  A         +              G    T+        V  +   V+R + 
Sbjct: 117 GHPVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176

Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           GI              L+    + V  G LE SN N++  M  MI   ++F     +I  
Sbjct: 177 GIFRLSAETQATRGLVLQADPTLRVMSGVLEGSNVNTVAAMSDMIASARRFEMQMKVISS 236

Query: 230 NEKSMLEAIRNI 241
            + +   A   +
Sbjct: 237 VDDNAGRA-NQL 247


>gi|239834442|ref|ZP_04682770.1| flagellar basal body rod protein FlgG [Ochrobactrum intermedium LMG
           3301]
 gi|239822505|gb|EEQ94074.1| flagellar basal body rod protein FlgG [Ochrobactrum intermedium LMG
           3301]
          Length = 226

 Score =  116 bits (291), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 38/194 (19%), Positives = 65/194 (33%), Gaps = 7/194 (3%)

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSL 114
              V +         GSF  TG   D AL G  WF ++SP    + TR G F    DG L
Sbjct: 33  GLGVQTAAVRNLHIQGSFNQTGNPYDVALTGRGWFQIQSPTGETLYTRAGAFNKNPDGQL 92

Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGE-KGEISQKGKVIATMGLYSVDMSQGFVRRE 173
           V+  G      +   P  I            K +       +  + L +     G     
Sbjct: 93  VTLDGNPVEPAITIPPDAIEVTITDTGQVFAKLQDQINQVDLGQLTLANFTNEAGLEPLG 152

Query: 174 NSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228
            +                      ++K+G+LE SN + + E+  +I   + +   + +I 
Sbjct: 153 GNLYRETEASGGPLVGVPGDPGYGSIKQGYLEASNVDPVKEITDLITAQRAYEMNSKVIQ 212

Query: 229 ENEKSMLEAIRNIA 242
             ++      +N+ 
Sbjct: 213 AADEMAATVSKNLR 226


>gi|205375363|ref|ZP_03228153.1| flagellar hook-basal body complex protein [Bacillus coahuilensis
           m4-4]
          Length = 279

 Score =  116 bits (291), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 51/280 (18%), Positives = 104/280 (37%), Gaps = 39/280 (13%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M    N+       L+Q L  ++ N++N DT G++    +FSE++    ++         
Sbjct: 1   MNRIMNVATNTMAQLQQHLDVISHNVANVDTNGYKAQNARFSEMLVQQFDNQKNPANEIG 60

Query: 56  ---------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF-----ALESPRGIILT 101
                          G+  ++   G+  STG  LDF L+    +            +  +
Sbjct: 61  RLTPNGLRLGVGAGIGQIQMNTSQGALQSTGRSLDFILQNQTHYFKVLNQSGGQSEVNYS 120

Query: 102 RDGRFKVTDDGS---LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG---EISQKGKVI 155
           R G F ++       +++ +   P+L+    PI IP     F   + G     + +G+  
Sbjct: 121 RSGAFYLSPLNDDTAMLTDANGNPILNSDDQPITIPGDATSFYPDQNGVLVVETPRGQER 180

Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-------------TVKRGFLEDS 202
             +G+ S+   Q    +  + +        L+  +               +VK+GF+E S
Sbjct: 181 IELGVVSIQKPQFLESKGGNLVGLPTNFNQLDVDANTILTDLNGANRAEISVKQGFIEKS 240

Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           N +   E+  MI++ + +      I   ++ M   +  I 
Sbjct: 241 NVDLSKELTDMINVQRSYQFQARTISMADQMMG-LVNGIR 279


>gi|188997558|ref|YP_001931809.1| flagellar basal body rod protein [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188932625|gb|ACD67255.1| flagellar basal body rod protein [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 236

 Score =  116 bits (291), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 57/239 (23%), Positives = 103/239 (43%), Gaps = 13/239 (5%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV-KFSEVVGAIKNDIDQKISFVASGK 63
             I  +      ++L T  +N++N++T GF+ + V + S+ +   K  +   + F     
Sbjct: 8   IYILASGGERATEQLDTTTNNIANSNTPGFKKLLVREMSQKIPENKGKVGDLLVFPRFMD 67

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPV 123
             +    G  I T   LD A+  D +F +ES  G   TR+G F +  +G LV  +G Y +
Sbjct: 68  SSVLNFQGPLIKTENNLDLAIVRDGFFTVESAIGRYYTRNGHFSINQEGYLVDVNGAYVL 127

Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183
                   +I  +D  F +  KGEI Q G++   + + ++   Q        G    I  
Sbjct: 128 ---DENFRRIQIQDSKFQITPKGEIYQNGQITGKIRVVNLQNLQAVGNSYYQGQEQQITN 184

Query: 184 TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
                     +K+G+LE +N N + EM +MI+  ++F+    L    +  +   +  I 
Sbjct: 185 F--------EIKQGYLEGANLNIVKEMVEMINNHRRFDIYMNLAKYLD-MLEGKVNEIG 234


>gi|51596012|ref|YP_070203.1| flagellar basal body rod protein FlgF [Yersinia pseudotuberculosis
           IP 32953]
 gi|153947059|ref|YP_001401289.1| flagellar basal body rod protein FlgF [Yersinia pseudotuberculosis
           IP 31758]
 gi|170024646|ref|YP_001721151.1| flagellar basal body rod protein FlgF [Yersinia pseudotuberculosis
           YPIII]
 gi|51589294|emb|CAH20915.1| flagellar basal-body rod protein FlgF [Yersinia pseudotuberculosis
           IP 32953]
 gi|152958554|gb|ABS46015.1| flagellar basal-body rod protein FlgF [Yersinia pseudotuberculosis
           IP 31758]
 gi|169751180|gb|ACA68698.1| flagellar basal-body rod protein FlgF [Yersinia pseudotuberculosis
           YPIII]
          Length = 251

 Score =  116 bits (291), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 45/252 (17%), Positives = 87/252 (34%), Gaps = 13/252 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A     +  +  A+N++N  T GFR        V   I        + V 
Sbjct: 1   MDHAIYTAMGAARQSLELQAVTANNLANASTPGFRAQLAAMRAV--PIDGPSLATRTMVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +    +    G+   +G  LD AL+ D + A++ P      TR+G  +++ +G + +  G
Sbjct: 59  TSTPGVDISQGTMNFSGRPLDVALQQDGYLAVQLPDGSEAYTRNGNIQISANGQM-TVQG 117

Query: 120 KYPVLDM---ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
              + D       P           +           +     +  V  + G +   + G
Sbjct: 118 YPLMGDNGPIDVPPQAAVTIAADGTISALNAGDSPNTIAQLGQIKRVQATAGEMMHGDDG 177

Query: 177 IS------PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
           +              L +   V +  G LE SN  ++  M  MI   + F     +I   
Sbjct: 178 LFHLTPETQQARGAQLPNDPLVKIMPGVLEGSNVKAVEAMTDMIANARSFEMQMKVIQSV 237

Query: 231 EKSMLEAIRNIA 242
           +++   A + +A
Sbjct: 238 DENEQSANQLLA 249


>gi|51597636|ref|YP_071827.1| flagellar basal body rod protein FlgF [Yersinia pseudotuberculosis
           IP 32953]
 gi|186896770|ref|YP_001873882.1| flagellar basal body rod protein FlgF [Yersinia pseudotuberculosis
           PB1/+]
 gi|51590918|emb|CAH22574.1| putative flagellar basal-body rod protein FlgF [Yersinia
           pseudotuberculosis IP 32953]
 gi|186699796|gb|ACC90425.1| flagellar basal-body rod protein FlgF [Yersinia pseudotuberculosis
           PB1/+]
          Length = 243

 Score =  116 bits (291), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 50/244 (20%), Positives = 94/244 (38%), Gaps = 8/244 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       ++       +    A+N++N++T GFR            +          V 
Sbjct: 1   MDKLLYTAVSGANRSLSQQQIHANNLANSNTQGFRADLE--KATATQVMGGGYNSRVAVL 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           S    +     S   TG +LD AL+     A+ S    + TR+G+  V+ +G  ++ +G 
Sbjct: 59  SQNAGVDMTPASLQETGRDLDIALKNQGLIAVLSGGREVYTRNGQMDVSAEG-ALTINGL 117

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSGI 177
             + D   + +       I + G    I Q G +     +     VD+    +R+ N G+
Sbjct: 118 PVLGDGGPIVLPPYSALSIADDGTIAIIPQAGGIKTPEEIERIKLVDIPANQLRKNNRGL 177

Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
             +    P      V V    LE SN +++ EM   I L+++F +   ++   E  + +A
Sbjct: 178 LVSNRG-PAARDETVQVVNKHLESSNVSAISEMIASISLSRQFEAQIKMMKVAED-LAQA 235

Query: 238 IRNI 241
              +
Sbjct: 236 GNRM 239


>gi|315618247|gb|EFU98837.1| flagellar basal-body rod protein FlgF [Escherichia coli 3431]
          Length = 251

 Score =  116 bits (291), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 83/252 (32%), Gaps = 16/252 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   ++       + V 
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G    T   LD AL+ D W A+++       TR+G  +V   G L     
Sbjct: 59  ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDSTGQL--TIQ 116

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
            +PV+  A         +              G    T+        V  +   V+R + 
Sbjct: 117 GHPVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176

Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           GI              L+    + V  G LE SN N++  M  MI   ++F     +I  
Sbjct: 177 GIFRLSAETQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236

Query: 230 NEKSMLEAIRNI 241
            + +   A   +
Sbjct: 237 VDDNAGRA-NQL 247


>gi|186895115|ref|YP_001872227.1| flagellar basal body rod protein FlgF [Yersinia pseudotuberculosis
           PB1/+]
 gi|186698141|gb|ACC88770.1| flagellar basal-body rod protein FlgF [Yersinia pseudotuberculosis
           PB1/+]
          Length = 251

 Score =  116 bits (291), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 45/252 (17%), Positives = 87/252 (34%), Gaps = 13/252 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A     +  +  A+N++N  T GFR        V   I        + V 
Sbjct: 1   MDHAIYTAMGAARQSLELQAVTANNLANASTPGFRAQLAAMRAV--PIDGPSLATRTMVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +    +    G+   +G  LD AL+ D + A++ P      TR+G  +++ +G + +  G
Sbjct: 59  TSTPGVDISQGTMNFSGRPLDVALQQDGYLAVQLPDGSEAYTRNGNIQISANGQM-TVQG 117

Query: 120 KYPVLDM---ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
              + D       P           +           +     +  V  + G +   + G
Sbjct: 118 YPLMGDNGPIDVPPQAAVTIAADGTISALNAGDSPNAIAQLGQIKRVQATAGEMMHGDDG 177

Query: 177 IS------PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
           +              L +   V +  G LE SN  ++  M  MI   + F     +I   
Sbjct: 178 LFHLTPETQQARGAQLPNDPLVKIMPGVLEGSNVKAVEAMTDMIANARSFEMQMKVIQSV 237

Query: 231 EKSMLEAIRNIA 242
           +++   A + +A
Sbjct: 238 DENEQSANQLLA 249


>gi|161503734|ref|YP_001570846.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160865081|gb|ABX21704.1| hypothetical protein SARI_01819 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 251

 Score =  116 bits (291), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 42/252 (16%), Positives = 73/252 (28%), Gaps = 16/252 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   +        + V 
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVDGLSLATRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTD------DGS 113
           +         G    T   LD AL+ D W  +++       TR+G  +V         G 
Sbjct: 59  ASTPGADMTPGQLDYTSRPLDVALQQDGWLVVQAADGAEGYTRNGNIQVGPTGQLTIQGH 118

Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG----KVIATMGLYSVDMSQGF 169
            V   G    +   +                    +       K++   G        G 
Sbjct: 119 PVIGEGGPITVPEGAEITIAADGTISALNPGDPPNTVAPVGQLKLVKAEGHEVQRGDDGL 178

Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
            R      +       L     + +  G LE SN   +  M  MI   ++F     +I  
Sbjct: 179 FRLTADAQA--SRGAVLAADPSIRIMSGVLEGSNVKPVEAMTDMIANARRFEMQMKVITS 236

Query: 230 NEKSMLEAIRNI 241
            +++   A   +
Sbjct: 237 VDENEGRA-NQL 247


>gi|62179695|ref|YP_216112.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|62127328|gb|AAX65031.1| flagellar biosynthesis, cell-proximal portion of basal-body rod
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
          Length = 251

 Score =  116 bits (291), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 43/252 (17%), Positives = 73/252 (28%), Gaps = 16/252 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   +        + V 
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVDGLSLATRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTD------DGS 113
           +         G    T   LD AL+ D W  +++       TR+G  +V         G 
Sbjct: 59  ASTPGADMTPGQLDYTSRPLDVALQQDGWLVVQAADGAEGYTRNGNIQVGPTGQLTIQGH 118

Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG----KVIATMGLYSVDMSQGF 169
            V   G    +   S                    +       K++   G        G 
Sbjct: 119 PVIGEGGPITVPEGSEITIAADGTISALNPGDPPNTVAPVGRLKLVKAEGNEVQRSDDGL 178

Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
            R      +       L     + +  G LE SN   +  M  MI   ++F     +I  
Sbjct: 179 FRLTTEAQAE--RGAVLAADPSIRIMSGVLEGSNVKPVEAMTDMIANARRFEMQMKVITS 236

Query: 230 NEKSMLEAIRNI 241
            +++   A   +
Sbjct: 237 VDENEGRA-NQL 247


>gi|170750088|ref|YP_001756348.1| hypothetical protein Mrad2831_3689 [Methylobacterium radiotolerans
           JCM 2831]
 gi|170656610|gb|ACB25665.1| protein of unknown function DUF1078 domain protein
           [Methylobacterium radiotolerans JCM 2831]
          Length = 263

 Score =  116 bits (291), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 49/255 (19%), Positives = 93/255 (36%), Gaps = 21/255 (8%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           + +  ++   A    L+ ++ N++NT TVGF++ + +F++++     D  Q    V    
Sbjct: 6   ALSNSISGASAQSLALNNISGNIANTQTVGFKSTETRFADMLAET-GDSTQLAGGVLPST 64

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGII----------LTRDGRFKVTDDGS 113
                  G+  STG   + A+ G+ +F ++   G             TR G F     G 
Sbjct: 65  RNSLNIQGTMQSTGVSTNLAISGNGYFIVKKNTGTPDSPAFGGDTGYTRRGDFAPDASGY 124

Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLY---------SVD 164
           L + +G Y     ++                    +      A  G              
Sbjct: 125 LSNGAGYYLFAGPSATTPVQVPTGASTLASLAVSPAGTLTGTAADGSTLALGTLQLAQFG 184

Query: 165 MSQGFVRRENS-GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223
           M       +    ++     TP   L+G TV  G +E SNA    +  +MI   Q + + 
Sbjct: 185 MQDNLASLDGGTYVATGQSGTPSYGLNGATVTAGSVEQSNAGISDQFSKMIETQQAYTAN 244

Query: 224 TTLIDENEKSMLEAI 238
           T ++   ++ + +AI
Sbjct: 245 TKVMSTTDQMLQDAI 259


>gi|157146225|ref|YP_001453544.1| flagellar basal body rod protein FlgF [Citrobacter koseri ATCC
           BAA-895]
 gi|157083430|gb|ABV13108.1| hypothetical protein CKO_01982 [Citrobacter koseri ATCC BAA-895]
          Length = 251

 Score =  116 bits (290), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 49/252 (19%), Positives = 82/252 (32%), Gaps = 16/252 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   ++       + VA
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVA 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G    T   LD AL+ D W  +++       TR+G  +V   G L     
Sbjct: 59  ASTPGADMTPGQMDYTSRPLDVALQQDGWLVVQTADGNEGYTRNGSIQVDPTGQL--TIQ 116

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
            +PV+  A         +              G    T+        V      V+R + 
Sbjct: 117 GHPVIGEAGPIAVPEGSEITIAADGTISALNPGDPANTVAPVGRLKLVKALGSEVQRGDD 176

Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           G+              L+    + V  G LE SN N++  M  MI   ++F     +I  
Sbjct: 177 GMFRLSAATQAARGPVLQADPSIRVMSGVLEGSNVNAVSAMSDMIANARRFEMQMKVISS 236

Query: 230 NEKSMLEAIRNI 241
            + +   A   +
Sbjct: 237 VDDNAGRA-NQL 247


>gi|56413835|ref|YP_150910.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|197362758|ref|YP_002142395.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|56128092|gb|AAV77598.1| putative flagellar basal-body rod protein FlgF (proximal rod
           protein) [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|197094235|emb|CAR59740.1| putative flagellar basal-body rod protein FlgF (proximal rod
           protein) [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
          Length = 251

 Score =  116 bits (290), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 43/251 (17%), Positives = 77/251 (30%), Gaps = 14/251 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   +        + V 
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVDGLSLATRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G    T   LD AL+ D W  +++       TR+G  +V   G  ++  G
Sbjct: 59  ASTPGADMTPGQLDYTSRPLDVALQQDGWLVVQAADGAEGYTRNGNIQVGPTG-QLTIQG 117

Query: 120 KYPVLDM---ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
              + +          +        +           V     L  V      V+R + G
Sbjct: 118 HPVIGEGGPITVPEGSVITIAADGTISALNPGDPPNTVAPVGRLKLVKAEGNEVQRSDDG 177

Query: 177 ISPNIPPTPLEDL------SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
           +         E          + +  G LE SN   +  M  MI   ++F     +I   
Sbjct: 178 LFRLTAEAQAERGAVLAADPSIRIMSGVLEGSNVKPVEAMTDMIANARRFEMQMKVITSV 237

Query: 231 EKSMLEAIRNI 241
           +++   A   +
Sbjct: 238 DENEGRA-NQL 247


>gi|157147101|ref|YP_001454420.1| flagellar basal body rod protein FlgF [Citrobacter koseri ATCC
           BAA-895]
 gi|157084306|gb|ABV13984.1| hypothetical protein CKO_02878 [Citrobacter koseri ATCC BAA-895]
          Length = 243

 Score =  116 bits (290), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 45/236 (19%), Positives = 88/236 (37%), Gaps = 7/236 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       ++       +    A+N++N +T GFR+       +   +  +         
Sbjct: 1   MDRLIFTAMSGASRSLSQQQIHANNLANVNTQGFRSDLDN--AISQQVNGEGYASRYMAL 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
             +  +    G+   TG  LD A++GD   AL S    + TR+G+  V+ +G  +S +G 
Sbjct: 59  PTQGGVDMTPGAVRETGRNLDIAIKGDGLIALASGNREVYTRNGQIDVSPEGD-LSINGL 117

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSGI 177
               D   + +       I   G    +   G + A + +     V++    + +   G 
Sbjct: 118 PVEGDNGPIVLPPFSSVSIGEDGVITIVPDDGDIAAPVDVDRIKLVNIPVSDLSKNVDGF 177

Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
             +           V V  G LE +N +++ EM   I L ++F +   ++   E  
Sbjct: 178 LVSNTAI-NPRDEEVMVASGHLETANVSAINEMVASIALNRQFEAQIKMMKAAEDL 232


>gi|238764393|ref|ZP_04625343.1| Flagellar basal-body rod protein flgF [Yersinia kristensenii ATCC
           33638]
 gi|238697419|gb|EEP90186.1| Flagellar basal-body rod protein flgF [Yersinia kristensenii ATCC
           33638]
          Length = 251

 Score =  116 bits (290), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 44/251 (17%), Positives = 84/251 (33%), Gaps = 11/251 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A     +  +  A+N++N  T GFR        V   I        + V 
Sbjct: 1   MDHAIYTAMGAARQSLELQAVTANNLANASTPGFRAQLAAMRAV--PIDGPSMATRTMVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSA-- 117
           +    +    G+   +G  LD AL+ D + A++ P      TR+G  +++ DG +     
Sbjct: 59  ASTPGVDISQGTMNYSGRPLDVALQQDGYLAVQLPDGTEAYTRNGNIQISADGQMTVQGY 118

Query: 118 --SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
              G    +D+          D   +    G+       +  +        +     +  
Sbjct: 119 PLMGDNGPIDVPPQAAITIAADGTISALNAGDSPNTIAQLGQIKRVRATAGEVMHGDDGL 178

Query: 176 GISPN----IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
                         L +   + V  G LE SN  ++  M  MI   + F     +I   +
Sbjct: 179 FHLTPETQQARGAQLANDPLIKVMPGVLEGSNVKAVEAMTDMIANARSFEMQMKVIHSVD 238

Query: 232 KSMLEAIRNIA 242
           ++   A + +A
Sbjct: 239 ENEQRANQLLA 249


>gi|293395584|ref|ZP_06639867.1| flagellar basal-body rod protein FlgF [Serratia odorifera DSM 4582]
 gi|291421903|gb|EFE95149.1| flagellar basal-body rod protein FlgF [Serratia odorifera DSM 4582]
          Length = 251

 Score =  116 bits (290), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 47/246 (19%), Positives = 82/246 (33%), Gaps = 11/246 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A+N++N  T GFR        V   +     Q  + V 
Sbjct: 1   MDHAIYTAMGAARQTLDQQAITANNLANASTPGFRAQLAALRAV--PVDGPSLQTRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSA-- 117
           +         G+   TG  LD AL+ D + AL+        TR+G  +++  G L     
Sbjct: 59  ASTPGADMSQGALNYTGRPLDVALQQDGFLALQQADGSEAYTRNGNIQISSTGQLTVQGL 118

Query: 118 --SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
              G    +++          D   +    G+       I  + L   D  +     +  
Sbjct: 119 PLMGDGGPIEVPPQAEITIAADGTISALNPGDPPNTIAQIGRLKLVKADAREVMRGDDGL 178

Query: 176 GISPNIP----PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
                         L++   V V  G +E SN   M  M  MI   ++F     +I   +
Sbjct: 179 FHLTPATREQRGNQLQNDPLVQVMPGVIEGSNVKPMETMVDMIANARRFEMQMKVIHSVD 238

Query: 232 KSMLEA 237
           ++   A
Sbjct: 239 ENEQRA 244


>gi|74311639|ref|YP_310058.1| flagellar basal body rod protein FlgF [Shigella sonnei Ss046]
 gi|73855116|gb|AAZ87823.1| flagellar protein for cell-proximal portion of basal-body rod
           [Shigella sonnei Ss046]
          Length = 251

 Score =  116 bits (290), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 49/252 (19%), Positives = 82/252 (32%), Gaps = 16/252 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   ++       + V 
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G    T   LD AL+ D W A+++       TR+G  +V   G L     
Sbjct: 59  ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
            + V+  A         +              G    T+        V  +   V+R + 
Sbjct: 117 GHQVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176

Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           GI              L+    + V  G LE SN N++  M  MI   ++F     +I  
Sbjct: 177 GIFRLSAETQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236

Query: 230 NEKSMLEAIRNI 241
            + +   A   +
Sbjct: 237 VDDNAGRA-NQL 247


>gi|296102907|ref|YP_003613053.1| flagellar basal body rod protein FlgF [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295057366|gb|ADF62104.1| flagellar basal body rod protein FlgF [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 251

 Score =  116 bits (290), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 50/253 (19%), Positives = 86/253 (33%), Gaps = 15/253 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   ++       + V 
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119
           +         G    T   LD AL+ D W A+++  G    TR+G  +V+  G L     
Sbjct: 59  ASTPGADMTPGQMDYTARPLDVALQQDGWLAVQTADGGEGYTRNGNIQVSATGQL--TIQ 116

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
            +PV+  A         +              G    T+        V      V+R + 
Sbjct: 117 GHPVMGEAGPLTVPEGSELTIAADGTISALNPGDPANTVAPVGRLKLVKADGKEVQRGDD 176

Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           G+              L+    + V  G LE SN   +  M  MI   ++F     +I  
Sbjct: 177 GMFRLTQAAQATRGATLQADPTIRVMSGVLEGSNVKPVEAMTDMIASARRFEMQMKIISS 236

Query: 230 NEKSMLEAIRNIA 242
            +++  +A + +A
Sbjct: 237 VDENAGKANQLLA 249


>gi|16764534|ref|NP_460149.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|161614599|ref|YP_001588564.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167553034|ref|ZP_02346784.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|167994042|ref|ZP_02575134.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168234104|ref|ZP_02659162.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|168237260|ref|ZP_02662318.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|168244777|ref|ZP_02669709.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|168264029|ref|ZP_02686002.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|168467130|ref|ZP_02700972.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|194446055|ref|YP_002040432.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194449678|ref|YP_002045177.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194470312|ref|ZP_03076296.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194736339|ref|YP_002114177.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197265515|ref|ZP_03165589.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|198245943|ref|YP_002215959.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|200390876|ref|ZP_03217487.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|205353084|ref|YP_002226885.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|207857314|ref|YP_002243965.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|224584318|ref|YP_002638116.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|238911002|ref|ZP_04654839.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|120298|sp|P16323|FLGF_SALTY RecName: Full=Flagellar basal-body rod protein flgF; AltName:
           Full=Putative proximal rod protein
 gi|47676|emb|CAA36313.1| flgF protein product (AA 1-251) [Salmonella enterica subsp.
           enterica serovar Typhimurium]
 gi|16419695|gb|AAL20108.1| flagellar biosynthesis protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|161363963|gb|ABX67731.1| hypothetical protein SPAB_02349 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194404718|gb|ACF64940.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194407982|gb|ACF68201.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194456676|gb|EDX45515.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194711841|gb|ACF91062.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|195630350|gb|EDX48976.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|197243770|gb|EDY26390.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197289883|gb|EDY29244.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|197940459|gb|ACH77792.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|199603321|gb|EDZ01867.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|205272865|emb|CAR37794.1| putative flagellar basal-body rod protein FlgF (proximal rod
           protein) [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|205322401|gb|EDZ10240.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|205328032|gb|EDZ14796.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205331944|gb|EDZ18708.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|205336412|gb|EDZ23176.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|205347326|gb|EDZ33957.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|206709117|emb|CAR33450.1| putative flagellar basal-body rod protein FlgF (proximal rod
           protein) [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|224468845|gb|ACN46675.1| putative flagellar basal-body rod protein FlgF (proximal rod
           protein) [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|261246389|emb|CBG24198.1| putative flagellar basal-body rod protein FlgF (proximal rod
           protein) [Salmonella enterica subsp. enterica serovar
           Typhimurium str. D23580]
 gi|267992952|gb|ACY87837.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301157719|emb|CBW17211.1| putative flagellar basal-body rod protein FlgF (proximal rod
           protein) [Salmonella enterica subsp. enterica serovar
           Typhimurium str. SL1344]
 gi|312912165|dbj|BAJ36139.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|321223796|gb|EFX48859.1| Flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
 gi|322616548|gb|EFY13457.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322620511|gb|EFY17375.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322622505|gb|EFY19350.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322629656|gb|EFY26431.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322632624|gb|EFY29370.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322636881|gb|EFY33584.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322641581|gb|EFY38219.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322644071|gb|EFY40617.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322650029|gb|EFY46447.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322653954|gb|EFY50277.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322658486|gb|EFY54748.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322663344|gb|EFY59546.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322670078|gb|EFY66218.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322674858|gb|EFY70949.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322676672|gb|EFY72739.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322682594|gb|EFY78613.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322686653|gb|EFY82632.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|322714165|gb|EFZ05736.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
 gi|323129448|gb|ADX16878.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
 gi|323195767|gb|EFZ80943.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323198341|gb|EFZ83445.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323209178|gb|EFZ94115.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323209682|gb|EFZ94611.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323217862|gb|EGA02577.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323222150|gb|EGA06534.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323224922|gb|EGA09180.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323229664|gb|EGA13787.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323232889|gb|EGA16985.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323240624|gb|EGA24666.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323242938|gb|EGA26959.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323250255|gb|EGA34144.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323252630|gb|EGA36468.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323258842|gb|EGA42495.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323261031|gb|EGA44624.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323266940|gb|EGA50425.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323269981|gb|EGA53430.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
 gi|326623707|gb|EGE30052.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
 gi|326628164|gb|EGE34507.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
 gi|332988069|gb|AEF07052.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 251

 Score =  116 bits (290), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 43/252 (17%), Positives = 73/252 (28%), Gaps = 16/252 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   +        + V 
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVDGLSLATRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTD------DGS 113
           +         G    T   LD AL+ D W  +++       TR+G  +V         G 
Sbjct: 59  ASTPGADMTPGQLDYTSRPLDVALQQDGWLVVQAADGAEGYTRNGNIQVGPTGQLTIQGH 118

Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG----KVIATMGLYSVDMSQGF 169
            V   G    +   S                    +       K++   G        G 
Sbjct: 119 PVIGEGGPITVPEGSEITIAADGTISALNPGDPPNTVAPVGRLKLVKAEGNEVQRSDDGL 178

Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
            R      +       L     + +  G LE SN   +  M  MI   ++F     +I  
Sbjct: 179 FRLTAEAQAE--RGAVLAADPSIRIMSGVLEGSNVKPVEAMTDMIANARRFEMQMKVITS 236

Query: 230 NEKSMLEAIRNI 241
            +++   A   +
Sbjct: 237 VDENEGRA-NQL 247


>gi|90577345|ref|ZP_01233156.1| putative flagellar basal-body rod protein [Vibrio angustum S14]
 gi|90440431|gb|EAS65611.1| putative flagellar basal-body rod protein [Vibrio angustum S14]
          Length = 243

 Score =  116 bits (290), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 90/242 (37%), Gaps = 4/242 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M +      +    + +     ++N+SN DT GFR    +   +   ++       + V 
Sbjct: 1   MDSFLYTATSGASRVLKAQHVRSNNLSNADTAGFRADMERVKSI--PLQGAGFDGRTMVV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119
           +       + G  I TG  LD A+ GD +F +++       TR G  +V + G +     
Sbjct: 59  TNSAATRFDAGDVIKTGRALDIAINGDGFFTVQTIAGNEAYTRTGNIRVDEQGMMRVNGF 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                  A V  +    +              G  +    L  V+     +++++ G+  
Sbjct: 119 PLMSEGEALVLPEYQNVEISDKGVVSIVPLGGGAELEVGQLKLVNPDFNQLQKQSDGLLH 178

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +          V +  G LE SN +++ E+  ++ LT+ F     ++    +++ +A  
Sbjct: 179 PVNDQVFAQDPSVAMTAGHLEGSNVSAINELVSVMSLTRNFEMQVRMMKTA-ETLAQAGT 237

Query: 240 NI 241
            +
Sbjct: 238 RL 239


>gi|332162900|ref|YP_004299477.1| flagellar basal-body rod protein FlgF [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|325667130|gb|ADZ43774.1| Flagellar basal-body rod protein FlgF [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|330863350|emb|CBX73473.1| hypothetical protein YEW_ES20680 [Yersinia enterocolitica W22703]
          Length = 243

 Score =  116 bits (290), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 49/239 (20%), Positives = 90/239 (37%), Gaps = 7/239 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       ++       +    A+N+SN +T GFR            +          V 
Sbjct: 1   MDKLLYTAVSGANRSLTQQQIHANNLSNVNTQGFRADLE--RATATQVPGGGYNSRVAVL 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           S    +    GS   TG ELD A++     A+ S    + TR+G+ +V  DG  ++ +G 
Sbjct: 59  SQNAGVDMTAGSLQETGRELDVAIKDRGLIAVLSGGREVYTRNGQMEVGPDGD-LTINGM 117

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSGI 177
             + D  ++ +       + + G    I Q G +     +     VD+    + + N G+
Sbjct: 118 PVLGDGGAIVLPAYSAVSVADDGTIAIIPQAGGIKTPAEVDRIKLVDIPANQLSKNNRGL 177

Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
             N           V +    LE SN +++ EM   I L+++F +   ++   E+    
Sbjct: 178 LVNRRG-AAARDENVQLVSKHLESSNISAISEMTASISLSRQFEAQIKMMKVAEELAQS 235


>gi|227112522|ref|ZP_03826178.1| flagellar basal body rod protein FlgF [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 251

 Score =  116 bits (290), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 93/252 (36%), Gaps = 13/252 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    +       ++ +  A+N++N  T GFR        V   +        + V 
Sbjct: 1   MDHAIYTAMGGASQSLEKQAITANNLANASTPGFRAQLSALRAV--PVNGLTLPTRTLVV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119
           +         G    TG  +D AL  ++W A+++  G    TR+G  ++  DG  ++  G
Sbjct: 59  ASTPGADMTEGVMNYTGRAMDVALPKESWLAVQAADGGEAYTRNGNMEINADG-QLTIQG 117

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEIS--QKGKVIATMGLYSVDMSQGFVRRENS-- 175
           +  + D   + +    +  I   G    ++       IA +G   +  + G     +   
Sbjct: 118 RVVMGDGGPIDVPPQAQISISPDGTISALNAGDPPNTIAQLGRLKLVKATGQEVERSDDG 177

Query: 176 -----GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
                  +       L++   V +  G +E SN N++  M  MI   ++F     +I   
Sbjct: 178 LFRLTQQAQQQRGNVLQNDPTVRIMPGVIEGSNVNTVDTMVDMIANARRFEMQMKIISSV 237

Query: 231 EKSMLEAIRNIA 242
           + +   A + +A
Sbjct: 238 DDNAQRANQILA 249


>gi|134280876|ref|ZP_01767586.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           305]
 gi|125657219|gb|ABN48707.1| flagellar basal body rod protein [Burkholderia pseudomallei]
 gi|134247898|gb|EBA47982.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei
           305]
          Length = 241

 Score =  116 bits (290), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 47/241 (19%), Positives = 82/241 (34%), Gaps = 3/241 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       ++        ++  A+NM+N  T GF             ++         + 
Sbjct: 1   MDALIYTVMSGADRTLHGIAVHANNMANAQTDGFLAELEMAES--QPVRGYGYDSRHLLN 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
                L+ E G  + TG ELD A+ G  +F +++      TR G F++  DG+L      
Sbjct: 59  PRANALNGEAGVVVDTGRELDAAINGGGYFTVDAQGSEAYTRAGNFEIDADGALTVNGRP 118

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
                   V  +        +           +V A   L  VD     + +  +G+   
Sbjct: 119 VIGEGGPIVLPEFTSLRIGEDGTISITSPGDTEVQAVERLALVDAPASALVKNEAGLLVA 178

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
               PL   + V V  G LE SN + + EM   + L + F     + +   +    A   
Sbjct: 179 RDGQPLPASNEVKVLGGHLERSNVSPVEEMIATMSLNRAFEVQMRMFNAAGEMAD-AGNR 237

Query: 241 I 241
           +
Sbjct: 238 L 238


>gi|168822621|ref|ZP_02834621.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|204930894|ref|ZP_03221767.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|204320353|gb|EDZ05557.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|205340993|gb|EDZ27757.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|320086382|emb|CBY96155.1| Flagellar basal-body rod protein flgF putative proximal rod protein
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. 2007-60-3289-1]
          Length = 251

 Score =  116 bits (289), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 42/252 (16%), Positives = 73/252 (28%), Gaps = 16/252 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   +        + V 
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVDGLSLATRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTD------DGS 113
           +         G    T   LD AL+ D W  +++       TR+G  +V         G 
Sbjct: 59  ASTPGADMTPGQLDYTSRPLDVALQQDGWLVVQAADGAEGYTRNGNIQVGPTGQLTIQGH 118

Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG----KVIATMGLYSVDMSQGF 169
            V   G    +   +                    +       K++   G        G 
Sbjct: 119 PVIGEGGPITVPEGAEITIAADGTISALNPGDPPNTVAPVGRLKLVKAEGNEVQRSDDGL 178

Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
            R      +       L     + +  G LE SN   +  M  MI   ++F     +I  
Sbjct: 179 FRLTAEAQAE--RGAVLAADPSIRIMSGVLEGSNVKPVEAMTDMIANARRFEMQMKVITS 236

Query: 230 NEKSMLEAIRNI 241
            +++   A   +
Sbjct: 237 VDENEGRA-NQL 247


>gi|134300239|ref|YP_001113735.1| hypothetical protein Dred_2400 [Desulfotomaculum reducens MI-1]
 gi|134052939|gb|ABO50910.1| protein of unknown function DUF1078 domain protein
           [Desulfotomaculum reducens MI-1]
          Length = 856

 Score =  116 bits (289), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 40/201 (19%), Positives = 72/201 (35%), Gaps = 7/201 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------Q 54
           M  S   G++     + R+    +N++N +T G+++ +V F + +              Q
Sbjct: 1   MLRSLYSGISGMRNHQTRMDVTGNNIANVNTNGYKSSRVNFQDTLSQTVRSAGNGTNPAQ 60

Query: 55  KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSL 114
             S ++ G    +   G   STG  LD  ++G+ +F +        TR+G F V   G L
Sbjct: 61  VGSGMSVGSVSNNFTQGPMQSTGRTLDLGIQGNGFFVVSDGTNEFYTREGIFFVDKQGFL 120

Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174
           V+  G             +       N+G  G I+           +S + SQ  +    
Sbjct: 121 VNGEGLRVQSLAGQDIRVLNGPVSTINIGPDGAIAGTN-TAGQPLKFSNNDSQAIITPAQ 179

Query: 175 SGISPNIPPTPLEDLSGVTVK 195
                  P      +   T+K
Sbjct: 180 QSSIKGAPKYTTPKVEEATIK 200



 Score = 88.0 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 16/123 (13%), Positives = 40/123 (32%), Gaps = 5/123 (4%)

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
             +  +     I  K +  +             +  + L +    +G  +   +    ++
Sbjct: 731 VNIGGSHAADLIGDKPDKVDGEAASVTPPPQDTMGVIKLVTFQNPEGLEKAGRNLFGTSV 790

Query: 182 PPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                +          T+  G+LE SN +   E   MI   + + +   +I  ++  + E
Sbjct: 791 SSGEPKQGQANQSGFGTINSGYLEMSNVDLTEEFTNMITTQRGYQANARVITVSDSLLEE 850

Query: 237 AIR 239
            I+
Sbjct: 851 LIQ 853


>gi|227328339|ref|ZP_03832363.1| flagellar basal body rod protein FlgF [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 251

 Score =  116 bits (289), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 47/252 (18%), Positives = 93/252 (36%), Gaps = 13/252 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    +       ++ +  A+N++N  T GFR        V   +        + V 
Sbjct: 1   MDHAIYTAMGGASQSLEKQAITANNLANASTPGFRAQLSALRAV--PVNGLTLPTRTLVV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119
           +         G    TG  +D AL  ++W A+++   G   TR+G  ++  DG  ++  G
Sbjct: 59  ASTPGADMTEGVMNYTGRAMDVALPKESWLAVQTANGGEAYTRNGNMEINADG-QLTIQG 117

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEIS--QKGKVIATMGLYSVDMSQGFVRRENS-- 175
           +  + D   + I    +  I   G    ++       IA +G   +  + G     +   
Sbjct: 118 RVVMGDGGPIDIPPQAQISISPDGTISALNAGDPPNTIAQLGRLKLVKATGQEVERSDDG 177

Query: 176 -----GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
                  +       L++   V +  G +E SN N++  M  MI   ++F     +I   
Sbjct: 178 LFRLTQQAQQQRGNVLQNDPTVRIMPGVIEGSNVNTVDTMVDMIANARRFEMQMKVISSV 237

Query: 231 EKSMLEAIRNIA 242
           + +   A + +A
Sbjct: 238 DDNAQRANQILA 249


>gi|254227984|ref|ZP_04921414.1| flagellar basal-body rod protein FlgF [Vibrio sp. Ex25]
 gi|262396034|ref|YP_003287887.1| flagellar basal-body rod protein FlgF [Vibrio sp. Ex25]
 gi|151939480|gb|EDN58308.1| flagellar basal-body rod protein FlgF [Vibrio sp. Ex25]
 gi|262339628|gb|ACY53422.1| flagellar basal-body rod protein FlgF [Vibrio sp. Ex25]
          Length = 243

 Score =  116 bits (289), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 90/242 (37%), Gaps = 4/242 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M +      +    + +     ++N+SN DT GFR    +   V   ++       + V 
Sbjct: 1   MDSLLFTATSGASRVLKAQHVRSNNLSNADTAGFRADMERVRSV--EMQGPGFDGRTMVV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +       + G  + TG  LD A+ G+ + A+E+P      TR G  +V   G++     
Sbjct: 59  TNSASTRFDSGDIMKTGRPLDVAIMGEGYLAVETPAGNEAYTRAGNIQVDTFGAMTINGF 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                +   V     + +              G  I    L  V      +++E+  +  
Sbjct: 119 PVLGENGPLVVPDYQKIEISERGQVSVIPPGGGAEIVAGTLKLVKPEMNQLQKESDSLLH 178

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           ++   P      V +    +E SN +++ E+  ++ LT+ F     ++    +++ +A  
Sbjct: 179 SVDGVPFAADETVQLSPEHIEGSNVSAIDELISVMSLTRNFEMQVRMMKTA-ETLAQAGN 237

Query: 240 NI 241
            +
Sbjct: 238 KL 239


>gi|271500067|ref|YP_003333092.1| flagellar basal-body rod protein FlgF [Dickeya dadantii Ech586]
 gi|270343622|gb|ACZ76387.1| flagellar basal-body rod protein FlgF [Dickeya dadantii Ech586]
          Length = 251

 Score =  116 bits (289), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 52/252 (20%), Positives = 90/252 (35%), Gaps = 13/252 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A     ++ +  + NM+N  T GFR        V   I+   ++  + V 
Sbjct: 1   MDHAIYTAMGAASQTLEQQAVTSHNMANASTPGFRAQLAAMRAV--PIQGVTNETRTLVV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           S    +    GS   TG  +D AL  D W A+ +       TR+G  ++  +G  ++  G
Sbjct: 59  SSTPGVDTTPGSMDYTGRSMDVALSQDGWLAVRAADGSEAYTRNGNMEINSNG-QLTVQG 117

Query: 120 KYPVLDM---ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
              + D       P           +           V     L  V  +   V R + G
Sbjct: 118 NLVMGDGGPIEVPPQTQLTIGPDGTINALNPSDAANTVTQIGRLKLVKATANEVVRGDDG 177

Query: 177 ISPNIPPTPLEDLS------GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
                P    +  +       V V  G LE SN N++  M +MI  +++F     +I   
Sbjct: 178 FFRVSPAVQQQRGAVLQNDATVRVMPGVLEGSNVNTVESMVEMISNSRRFEMQMKVISSV 237

Query: 231 EKSMLEAIRNIA 242
           + +   A + +A
Sbjct: 238 DDNTQRANQILA 249


>gi|150388209|ref|YP_001318258.1| flagellar basal body rod protein [Alkaliphilus metalliredigens
           QYMF]
 gi|149948071|gb|ABR46599.1| flagellar basal body rod protein [Alkaliphilus metalliredigens
           QYMF]
          Length = 363

 Score =  116 bits (289), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 44/201 (21%), Positives = 88/201 (43%), Gaps = 2/201 (0%)

Query: 44  VVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103
           +   + + +    S V   K   +   G+   T   LD AL G  +F + +P G + TR+
Sbjct: 161 LYRPLGHVLGTMNSGVRIQKIETNFAQGAVAETANPLDVALNGQGFFRILTPNGEMYTRN 220

Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVG--EKGEISQKGKVIATMGLY 161
           G F ++++G LV+  G     +  ++     Q     N+   +KGEI   G V+  + + 
Sbjct: 221 GNFTMSNEGQLVTTEGHEVEGNAGAITFNEAQLMAAENIQITDKGEILLDGVVVDQIQIV 280

Query: 162 SVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221
           +++  +   +   S                  V +G+LE+SN NS+ EM +MI   + + 
Sbjct: 281 NINNVKDLRKHGQSYYYGEEGFELELAPFEGEVLQGYLEESNINSIQEMVEMISTFRDYE 340

Query: 222 SITTLIDENEKSMLEAIRNIA 242
           +   ++   ++ + +A+  I 
Sbjct: 341 ANQKVVQAYDEILQKAVGEIG 361



 Score = 84.9 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 62/204 (30%), Gaps = 10/204 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M        +     +++L   ++N++N +T GF+   V        +   I+  I    
Sbjct: 1   MFRGLYTATSGMQTAQRKLDVTSNNIANINTTGFKKDVVAAESFPEVLIRKINHDIRPRP 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
                  +      + G   D       +F +E+ +GI   R+  F   +DG L +    
Sbjct: 61  FNLNSGVEVTREGEALGLSTDA-----GFFRVETDQGISHNREASFAPDEDGFLRTYRRD 115

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
                 AS    +          + G +    +   T G      +   + R    +   
Sbjct: 116 LNGEIDASRGNYLLDATGQRVQVDNGNLEVNNQGQLTFG----GGATNLLYRPLGHVLGT 171

Query: 181 IPPTPLEDLSGVTVKRGFL-EDSN 203
           +              +G + E +N
Sbjct: 172 MNSGVRIQKIETNFAQGAVAETAN 195


>gi|261821154|ref|YP_003259260.1| flagellar basal body rod protein FlgF [Pectobacterium wasabiae
           WPP163]
 gi|261605167|gb|ACX87653.1| flagellar basal-body rod protein FlgF [Pectobacterium wasabiae
           WPP163]
          Length = 251

 Score =  116 bits (289), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 47/252 (18%), Positives = 94/252 (37%), Gaps = 13/252 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    +       ++ +  A+N++N  T GFR        V   +        + V 
Sbjct: 1   MDHAIYTAMGGASQSLEKQAITANNLANASTPGFRAQLSALRAV--PVNGLTLPTRTLVV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119
           +         G    TG  +D AL  ++W A+++   G   TR+G  +++ DG  ++  G
Sbjct: 59  ASTPGADMTEGVMNYTGRAMDVALPKESWLAVQTANGGEAYTRNGNMEISADG-QLTIQG 117

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEIS--QKGKVIATMGLYSVDMSQGFVRRENS-- 175
           +  + D   + I    +  I   G    ++       IA +G   +  + G     +   
Sbjct: 118 RVVMGDGGPIDIPPQAQISISPDGTISALNAGDPPNTIAQLGRLKLVKATGQEVERSDDG 177

Query: 176 -----GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
                  +       L++   V +  G +E SN N++  M  MI   ++F     +I   
Sbjct: 178 LFRLTQQAQQQRGNVLQNDPTVRIMPGVIEGSNVNTVDTMVDMIANARRFEMQMKVISSV 237

Query: 231 EKSMLEAIRNIA 242
           + +   A + +A
Sbjct: 238 DDNAQRANQILA 249


>gi|317133466|ref|YP_004092780.1| flagellar hook-basal body protein [Ethanoligenens harbinense
           YUAN-3]
 gi|315471445|gb|ADU28049.1| flagellar hook-basal body protein [Ethanoligenens harbinense
           YUAN-3]
          Length = 234

 Score =  116 bits (289), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 94/249 (37%), Gaps = 24/249 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +F  G A+  + +  +  +A++++N +T G+      FS+++       +       
Sbjct: 1   MIQAFFGGAASLRSRQTAMDVIANDIANVNTAGYVQRDTDFSDLLYDSMVRPENPSYANE 60

Query: 56  --ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDG 112
              S             GSF+ TG+ L+FA  G+ +FA+   +G++  TRDG F    + 
Sbjct: 61  LEGSGAGVDAVVADASAGSFVQTGSLLNFAPRGEGFFAVRDAQGVVSYTRDGTFTAQPE- 119

Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172
                +G   ++D             + +        Q G      G+++    Q     
Sbjct: 120 -----NGAAVLVDAQG--------RTVLDAQGNAIAVQNGVPQTQPGVFAFAFPQNLTAL 166

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
             S  + +      +      V +G  E SN +   EMG MI   + F     ++   ++
Sbjct: 167 GGSLFAASASSGAAQVSDEG-VLQGAYETSNVDLSSEMGNMIVTQRGFQMNARVVSTADQ 225

Query: 233 SMLEAIRNI 241
            +   + ++
Sbjct: 226 -IESYVNDL 233


>gi|84502378|ref|ZP_01000514.1| putative flagellar basal-body rod protein flgF [Oceanicola
           batsensis HTCC2597]
 gi|84389190|gb|EAQ01987.1| putative flagellar basal-body rod protein flgF [Oceanicola
           batsensis HTCC2597]
          Length = 250

 Score =  116 bits (289), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 53/246 (21%), Positives = 114/246 (46%), Gaps = 3/246 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND-IDQKISFV 59
           M  +  + L+   A+++ L   A+N++N +T GF+  ++ F+  +   +   + +  +FV
Sbjct: 1   MDNTTYVALSLARAMKRDLDVTANNIANANTAGFKAERIIFASYLHQDEGQRVGEGTNFV 60

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP-RGIILTRDGRFKVTDDGSLVSAS 118
                YL K  G+   T   LD A++G+A+ +   P       RDG+  +  DG LV+ S
Sbjct: 61  VDQGSYLDKTQGAMTRTDNPLDLAIKGEAFLSYRMPGGQTAYGRDGQLALDRDGYLVTLS 120

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178
           G   + +        P   +I    +    S +  V+  +GL+ +   Q ++R  NS + 
Sbjct: 121 GARVLDEGGGDIAIPPGAGKILISPDGTIASDETGVLGRVGLFDLPDVQSYIRLGNSMLV 180

Query: 179 PNIPPTPLEDLSGVT-VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
           P          +  + + +G +E SN + + E+ +++ + + ++  T L+   ++   + 
Sbjct: 181 PPEGREGQATAAEGSEILQGQIELSNVSPVAEVTRLMMIQKAYDRATKLMSTEDELRKDM 240

Query: 238 IRNIAS 243
           +R + S
Sbjct: 241 LRRLGS 246


>gi|253688971|ref|YP_003018161.1| flagellar basal-body rod protein FlgF [Pectobacterium carotovorum
           subsp. carotovorum PC1]
 gi|251755549|gb|ACT13625.1| flagellar basal-body rod protein FlgF [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 251

 Score =  116 bits (289), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 93/252 (36%), Gaps = 13/252 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    +       ++ +  A+N++N  T GFR        V   +        + V 
Sbjct: 1   MDHAIYTAMGGASQSLEKQAITANNLANASTPGFRAQLSALRAV--PVNGLTLPTRTLVV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119
           +         G    TG  +D AL  ++W A+++   G   TR+G  ++  DG  ++  G
Sbjct: 59  ASTPGADMTEGVMNYTGRAMDVALPKESWLAVQTANGGEAYTRNGNMEINADG-QLTIQG 117

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQ--KGKVIATMGLYSVDMSQGFVRRENS-- 175
           +  + D   + +    +  I   G    ++       IA +G   +  + G     +   
Sbjct: 118 RVVMGDGGPIDVPPQAQISISADGTISALNPGDPPNTIAQLGRLKLVKATGQEVERSDDG 177

Query: 176 -----GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
                  +       L++   V +  G +E SN N++  M  MI   ++F     +I   
Sbjct: 178 LFRLTQQAQQQRGNVLQNDPTVRIMPGVIEGSNVNTVDTMVDMIANARRFEMQMKVISSV 237

Query: 231 EKSMLEAIRNIA 242
           + +   A + +A
Sbjct: 238 DDNAQRANQILA 249


>gi|315179627|gb|ADT86541.1| flagellar basal-body rod protein FlgF [Vibrio furnissii NCTC 11218]
          Length = 243

 Score =  116 bits (289), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 45/242 (18%), Positives = 93/242 (38%), Gaps = 4/242 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M +      +    + +     ++N+SN DT GFR    +   V   ++       + V 
Sbjct: 1   MDSLLFTATSGASRVLKAQHVRSNNLSNADTAGFRADMERVRSV--PLQGSGFDGRTMVV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119
           +       + G  + TG  LD A+ GD +  +++P G    TR G   V  +G+L     
Sbjct: 59  TNSAATRFDSGDVVKTGRPLDVAVMGDGYLTVQTPEGGEAYTRAGNIAVDVNGALSINGF 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                + A V     + +              G  I    L  V  +   +++E+  +  
Sbjct: 119 AVMGENGALVLPDFQKVEVSERGRISVIPPGGGAEIEVGTLKLVKANDNPLQKESDSLLH 178

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +   PL   + V +    +E SN +++ E+  ++ LT+ F     ++    +++ +A  
Sbjct: 179 TVDGVPLAADNSVQLAPEHIEGSNVSAIDELLNVMSLTRNFEMQIRMMKTA-ETLAQAGN 237

Query: 240 NI 241
            +
Sbjct: 238 KL 239


>gi|260767924|ref|ZP_05876858.1| flagellar basal-body rod protein FlgF [Vibrio furnissii CIP 102972]
 gi|260615954|gb|EEX41139.1| flagellar basal-body rod protein FlgF [Vibrio furnissii CIP 102972]
          Length = 243

 Score =  116 bits (289), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 45/242 (18%), Positives = 93/242 (38%), Gaps = 4/242 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M +      +    + +     ++N+SN DT GFR    +   V   ++       + V 
Sbjct: 1   MDSLLFTATSGASRVLKAQHVRSNNLSNADTAGFRADMERVRSV--PLQGSGFDGRTMVV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119
           +       + G  + TG  LD A+ GD +  +++P G    TR G   V  +G+L     
Sbjct: 59  TNSAATRFDTGDVVKTGRPLDVAVMGDGYLTVQTPEGGEAYTRAGNIAVDVNGALSINGF 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                + A V     + +              G  I    L  V  +   +++E+  +  
Sbjct: 119 AVMGENGALVLPDFQKVEVSERGRISVIPPGGGAEIEVGTLKLVKANDNPLQKESDSLLH 178

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +   PL   + V +    +E SN +++ E+  ++ LT+ F     ++    +++ +A  
Sbjct: 179 TVDGVPLAADNSVQLAPEHIEGSNVSAIDELLNVMSLTRNFEMQIRMMKTA-ETLAQAGN 237

Query: 240 NI 241
            +
Sbjct: 238 KL 239


>gi|238919260|ref|YP_002932775.1| flagellar basal-body rod protein FlgF, [Edwardsiella ictaluri
           93-146]
 gi|238868829|gb|ACR68540.1| flagellar basal-body rod protein FlgF, putative [Edwardsiella
           ictaluri 93-146]
          Length = 251

 Score =  115 bits (288), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 50/253 (19%), Positives = 85/253 (33%), Gaps = 18/253 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A        +  A+NM+N+ T GFR        V   +  +     + V 
Sbjct: 1   MDHAIYTAMDAASQTLNLQAVAANNMANSTTPGFRAQLAAMRAV--PVDGESLDTRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119
           +        +G F  TG  LD AL+ D W     S      TRDG  +++ DG +++  G
Sbjct: 59  ASTPMNDLSMGRFDYTGRPLDVALQQDGWLELQMSNGTEAYTRDGNLQISPDG-MLTVEG 117

Query: 120 KYPVLDMASVPIQIPQKDEIF-----------NVGEKGEISQKGKVIATMGLYSVDMSQG 168
              + D   + +    +  I            +         + K++       V    G
Sbjct: 118 HPVMGDNGPISVPDRAQLTIAADGTITALGAGDNPNATTQIGRLKLVKATASEVVHGDDG 177

Query: 169 FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228
                 S  +       L     V V  G LE SN   +  M  MI   ++F     +I 
Sbjct: 178 LF--HLSAEAEQKRGASLPLDPTVKVMPGVLEGSNVQPVEAMISMISNARRFEMQMKVIR 235

Query: 229 ENEKSMLEAIRNI 241
             + +  +A   +
Sbjct: 236 SVDDNEQKA-NQL 247


>gi|251799753|ref|YP_003014484.1| flagellar basal body rod protein [Paenibacillus sp. JDR-2]
 gi|247547379|gb|ACT04398.1| flagellar basal body rod protein [Paenibacillus sp. JDR-2]
          Length = 288

 Score =  115 bits (288), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 46/286 (16%), Positives = 93/286 (32%), Gaps = 44/286 (15%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKN------- 50
           M        A   A ++R  T+ +N++N +T G++        F E++ ++         
Sbjct: 1   MLRGLYTAAAGMTAQQRRHDTITNNITNINTPGYKQTYAVTRSFPEMLLSLTGVDQKDEK 60

Query: 51  DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA---------------------- 88
            I +  + V + +       G  + TG   DFAL  +                       
Sbjct: 61  QIGKVSTGVFAEESLAIHLQGDLMQTGKSSDFALVSNIDVPGMAFDASGKYVSPDGDVTF 120

Query: 89  -----WFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVG 143
                +   +    I  TR G F +T DG LV+  G   +    +               
Sbjct: 121 QPQAFFTLQDKNGEIRYTRGGSFTLTSDGFLVAGDGSNVLGADGNPIQFPQGVSLDGLTL 180

Query: 144 EKGEISQKGKVIATMGLY----SVDMSQGFVRRENS---GISPNIPPTPLEDLSGVTVKR 196
              +     K  A  G       +D      R  +             P+     V V++
Sbjct: 181 TADQRFVDAKTGADSGRQLLLTRIDNPNELAREGDGKFRLAGDAQDARPVVAGERVEVRQ 240

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G++E SN ++      ++   + + +   +I   ++S+ +A+  + 
Sbjct: 241 GYVERSNVDAAQSSVDLMAALRAYEANQKVIQFYDESLDKAVNQVG 286


>gi|261339377|ref|ZP_05967235.1| flagellar basal-body rod protein FlgF [Enterobacter cancerogenus
           ATCC 35316]
 gi|288318178|gb|EFC57116.1| flagellar basal-body rod protein FlgF [Enterobacter cancerogenus
           ATCC 35316]
          Length = 251

 Score =  115 bits (288), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 49/253 (19%), Positives = 85/253 (33%), Gaps = 15/253 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   ++       + V 
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G    T   LD AL+ D W A+++       TR+G  +V+  G L     
Sbjct: 59  ASTPGADMTPGQMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGNIQVSATGQL--TIQ 116

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
            +PV+  A         +              G    T+        V      V+R + 
Sbjct: 117 GHPVMGEAGPLTVPEGSELTIAADGTVSALNPGDPANTVAPVGRLKLVKADAREVQRGDD 176

Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           G+              L+    + V  G LE SN   +  M  MI   ++F     +I  
Sbjct: 177 GMFRLTQATQATRGATLQADPSIRVMSGVLEGSNVKPVEAMTDMIASARRFEMQMKIISS 236

Query: 230 NEKSMLEAIRNIA 242
            +++  +A + +A
Sbjct: 237 VDENANKANQLLA 249


>gi|296134367|ref|YP_003641614.1| fagellar hook-basal body protein [Thermincola sp. JR]
 gi|296032945|gb|ADG83713.1| fagellar hook-basal body protein [Thermincola potens JR]
          Length = 362

 Score =  115 bits (288), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 76/194 (39%), Gaps = 17/194 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +     +  L  +  + ++A+N++N +T G++  +V+F +++ +             
Sbjct: 1   MLQALWSASSGMLGQQLAMDSIANNLANVNTTGYKKSRVEFQDLLYSEMRAPGKKTLRGE 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V      +    G    T   LD A+EG+A+FA+  P   +  TRDG F
Sbjct: 61  IIPTGFQTGNGVRPAGTPVIFGQGIIQQTDNPLDLAIEGNAFFAVRRPDGSLAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           K+   G+LV+A G   + +  +       +    +           + +  +  +  + +
Sbjct: 121 KLDAKGTLVTADGSKVLDENLNPLTFDSPQSLKIDNAGAILEQ---QAVGRIPGFVFEAA 177

Query: 167 QGFVRRENSGISPN 180
               + E+    P 
Sbjct: 178 DKLEKVEDGYFRPT 191



 Score = 86.1 bits (211), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 21/156 (13%), Positives = 54/156 (34%), Gaps = 9/156 (5%)

Query: 88  AWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGE 147
            +  L     +  T++ +  V  +G L++  G   V       + +   D    + ++G 
Sbjct: 211 YFQVLLPDGKVAYTKETQVSVDKNGRLITEKGYPIV-----PEVYLRLADGSVTLDKEGN 265

Query: 148 ISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV--TVKRGFLEDSNAN 205
           ++     +  + L       G  +  ++  + ++             T++   LE SN  
Sbjct: 266 LT-AAVQVGKLRLVKFVNPAGLNKIGSNMYAESVNSGAATVAGPADYTLRSSALEGSNVE 324

Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
              EM  MI   + +   +  I  +++ +      +
Sbjct: 325 VAEEMVNMIIANRAYELSSRSIRTSDEMLG-MANQL 359


>gi|311033282|ref|ZP_07711372.1| hypothetical protein Bm3-1_22549 [Bacillus sp. m3-13]
          Length = 280

 Score =  115 bits (288), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 46/281 (16%), Positives = 91/281 (32%), Gaps = 39/281 (13%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M             L+++L  ++ N++N DTVG++     F E++    N+         
Sbjct: 1   MNRIMLNATNTMNQLQKQLDLISHNVANVDTVGYKQRSASFQELLAQQSNNQPLAQYDNQ 60

Query: 54  ---------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-----PRGII 99
                    +  S     K  L    G   +T   LDFAL  +  F              
Sbjct: 61  TARQSELGIRVGSGSGLSKTQLHLTQGPMKATDRMLDFALTKENQFFTVQVTENGQTSTQ 120

Query: 100 LTRDGRFKVTDDG----SLVSASGKYPVLDMASV---PIQIPQKDEIFNVGEKGEISQKG 152
            TR+G F ++        LV++ G   +         P  + +     +      ++   
Sbjct: 121 FTRNGVFYLSPVNNAEVMLVTSEGHPVLDSDEQPIILPENVKEVKLQESGILSAVMTDGQ 180

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV----------TVKRGFLEDS 202
            +   +G+  V   Q    R  S  +        ++               +++G LE S
Sbjct: 181 AIARELGVAEVIRPQMLEARPGSLYALPPENVANQESVVGFLQGGARQDIRMQQGMLEQS 240

Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           N +   EM +M  + + +      +   ++ M   +  + S
Sbjct: 241 NVDLASEMTEMTLMQRSYQFNAKSVQFADQMMG-LVNGLKS 280


>gi|16760054|ref|NP_455671.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|29142175|ref|NP_805517.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|213161843|ref|ZP_03347553.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Typhi str. E00-7866]
 gi|213424681|ref|ZP_03357446.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213582038|ref|ZP_03363864.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
 gi|213613180|ref|ZP_03371006.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
 gi|213648927|ref|ZP_03378980.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|213865504|ref|ZP_03387623.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|289828579|ref|ZP_06546404.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-3139]
 gi|25298925|pir||AC0640 probable flagellar basal-body rod protein FlgF (proximal rod
           protein) STY1217 [imported] - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16502348|emb|CAD08302.1| putative flagellar basal-body rod protein FlgF (proximal rod
           protein) [Salmonella enterica subsp. enterica serovar
           Typhi]
 gi|29137805|gb|AAO69366.1| putative flagellar basal-body rod protein FlgF [Salmonella enterica
           subsp. enterica serovar Typhi str. Ty2]
          Length = 251

 Score =  115 bits (288), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 43/252 (17%), Positives = 73/252 (28%), Gaps = 16/252 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   +        + V 
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVDGLSLATRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTD------DGS 113
           +         G    T   LD AL+ D W  +++       TR+G  +V         G 
Sbjct: 59  ASTPGADMTQGQLDYTSRPLDVALQQDGWLVVQAADGAEGYTRNGNIQVGPTGQLTIQGH 118

Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG----KVIATMGLYSVDMSQGF 169
            V   G    +   S                    +       K++   G        G 
Sbjct: 119 PVIGEGGPITVPEGSEITIAADGTISALNPGDPPNTVAPVGRLKLVKAEGNEVQRSDDGL 178

Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
            R      +       L     + +  G LE SN   +  M  MI   ++F     +I  
Sbjct: 179 FRLTAEAQAE--RGAVLAADPSIRIMSGVLEGSNVKPVEAMTDMIANARRFEMQMKVITS 236

Query: 230 NEKSMLEAIRNI 241
            +++   A   +
Sbjct: 237 VDENEGRA-NQL 247


>gi|258512706|ref|YP_003186140.1| fagellar hook-basal body protein [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
 gi|257479432|gb|ACV59751.1| fagellar hook-basal body protein [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
          Length = 262

 Score =  115 bits (288), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 87/252 (34%), Gaps = 17/252 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV--------------G 46
           M      GL+   A    +  +ADN++N  T G+   +  F++++               
Sbjct: 1   MGQMMWNGLSGIQAANAWMDQIADNLANLQTPGYAAEQGTFADLLTMQVYGNATDPSSAA 60

Query: 47  AIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106
            +     +  + V    E       + + TG     A+EG  +F +++P G + TR G F
Sbjct: 61  RVTPPGWRGGTGVVRTGEERDFSQAAVVRTGIPTHLAIEGPGFFVVQTPSGRMYTRAGNF 120

Query: 107 KVT---DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
             +   D   +++     PVL  A  PI  P       V   G +       A + L  +
Sbjct: 121 IWSRRSDGSFVLATQTGDPVLSAAGQPIVKPADAPSMTVAPDGTVQFGRGRTAKLALVEI 180

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223
                 +  E +G+               +V +G +  SN +    M Q++     +   
Sbjct: 181 GEPSSHLIPEGNGLYRLASGGVAVPARNSSVIQGAVNASNVDETAAMAQLVAAQDFYEEN 240

Query: 224 TTLIDENEKSML 235
              I    + + 
Sbjct: 241 AQAISMANQLLG 252


>gi|90415317|ref|ZP_01223251.1| hypothetical protein GB2207_08376 [marine gamma proteobacterium
           HTCC2207]
 gi|90332640|gb|EAS47810.1| hypothetical protein GB2207_08376 [marine gamma proteobacterium
           HTCC2207]
          Length = 253

 Score =  115 bits (288), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 46/242 (19%), Positives = 90/242 (37%), Gaps = 9/242 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       L+A  +     + + + ++N  TVGF+      S  V      ++ +     
Sbjct: 1   MDKLTYTALSAMQSQSVARAAITNELANVSTVGFKKSFQIASSAVKIDGPGLETRFQPGL 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
              + ++   G+ +STG  LD ++       +++    I  TR G  KV+  G L +A G
Sbjct: 61  QITDVINLTPGTPMSTGRPLDISMNDQTVLGIQTESGDIAYTRRGDLKVSPSGVLENAIG 120

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV----DMSQGFVRRENS 175
              + +   + + +     I   G            A + +  +          VRR++ 
Sbjct: 121 DLIMGEGGPISVPVGNLITISPDGTVFAQLPTEPEAAAVAVGQLMLRDASQTQLVRRQDG 180

Query: 176 GISPNIPPTPLEDLSGV----TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
              P       +D +      +V  G LE SN N +  M +M+  +++F     L+ E +
Sbjct: 181 LFEPRDEALKGQDFNSGPLAVSVLPGMLEGSNVNPVGTMIKMLDFSRQFEMQLKLVKETQ 240

Query: 232 KS 233
             
Sbjct: 241 SI 242


>gi|197251378|ref|YP_002146865.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197215081|gb|ACH52478.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
          Length = 251

 Score =  115 bits (287), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 45/252 (17%), Positives = 77/252 (30%), Gaps = 16/252 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   +        + V 
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVDGLSLATRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G    T   LD AL+ D W  +++       TR+G  +V   G L     
Sbjct: 59  ASTPGADMTPGQLDYTSRPLDVALQQDGWLVVQAADGAEGYTRNGNIQVGPTGQL--TIQ 116

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
            +PV+            +              G    T+        V      V+R + 
Sbjct: 117 GHPVIGEGGPITVPEGSEITIAADGTISALNPGDPPNTVAPVGRLKLVKAEGNEVQRSDD 176

Query: 176 GISPNIPPTPLEDL------SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           G+         E          + +  G LE SN   +  M  MI   ++F     +I  
Sbjct: 177 GLFRLTAEAQAERGAVLAANPSIRIMSGVLEGSNVKPVEAMTDMIANARRFEMQMKVITS 236

Query: 230 NEKSMLEAIRNI 241
            +++   A   +
Sbjct: 237 VDENEGRA-NQL 247


>gi|309779448|ref|ZP_07674209.1| flagellar basal-body rod protein FlgF [Ralstonia sp. 5_7_47FAA]
 gi|308921689|gb|EFP67325.1| flagellar basal-body rod protein FlgF [Ralstonia sp. 5_7_47FAA]
          Length = 245

 Score =  115 bits (287), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 48/244 (19%), Positives = 94/244 (38%), Gaps = 6/244 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  S  + +     L  + +  A+N++N  T GF+     F  V   ++ +     S+V 
Sbjct: 1   MDRSIYVSMTGVKHLFDQQAASANNLANASTTGFKAQIDAFHTV--GVQGEGSPTRSYVM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119
           +         G   +TG  LD A++G  +FA+++P G    TR G F++  DG++ + SG
Sbjct: 59  ASAIGTDLAPGPIETTGRSLDVAIDGQGFFAVQTPDGGEAYTRAGTFQLGPDGTIQTLSG 118

Query: 120 KYPVLDMASV--PIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177
           +  + D   +  P     +              +   ++   L  V +    + R   G+
Sbjct: 119 QPVLGDGGPITLPPNTTVQFAKDGTVNAISADSRTPPVSLGRLKLVSIDPANIDRGADGL 178

Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                         V +  G LE SN N    +  MI ++++       +  ++ +   A
Sbjct: 179 FRQRDGQDAGVDEKVRITGGALEGSNVNLTDSLVNMIEISRQLEMQMKSLHTSDTNAQSA 238

Query: 238 IRNI 241
              +
Sbjct: 239 -NEL 241


>gi|50120640|ref|YP_049807.1| flagellar basal body rod protein FlgF [Pectobacterium atrosepticum
           SCRI1043]
 gi|49611166|emb|CAG74612.1| flagellar basal-body rod protein [Pectobacterium atrosepticum
           SCRI1043]
          Length = 251

 Score =  115 bits (287), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 47/252 (18%), Positives = 93/252 (36%), Gaps = 13/252 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    +       ++ +  A+N++N  T GFR        V   +        + V 
Sbjct: 1   MDHAIYTAMGGASQSLEKQAITANNLANASTPGFRAQLSALRAV--PVNGLTLPTRTLVV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119
           +         G    TG  +D AL  ++W A+++   G   TR+G  ++  DG  ++  G
Sbjct: 59  ASTPGADMTEGVMNYTGRAMDVALPKESWLAVQTANGGEAYTRNGNMEINADG-QLTIQG 117

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEIS--QKGKVIATMGLYSVDMSQGFVRRENS-- 175
           +  + D   + I    +  I   G    ++       IA +G   +  + G     +   
Sbjct: 118 RVVMGDGGPIDIPPQAQISISADGTISALNAGDPPNTIAQLGRLKLVKATGQEVERSDDG 177

Query: 176 -----GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
                  +       L++   V +  G +E SN N++  M  MI   ++F     +I   
Sbjct: 178 LFRLTQQAQQQRGNVLQNDPTVRIMPGVIEGSNVNTVDTMVDMIANARRFEMQMKVISSV 237

Query: 231 EKSMLEAIRNIA 242
           + +   A + +A
Sbjct: 238 DDNAQRANQILA 249


>gi|238785496|ref|ZP_04629479.1| Flagellar basal-body rod protein flgF [Yersinia bercovieri ATCC
           43970]
 gi|238713598|gb|EEQ05627.1| Flagellar basal-body rod protein flgF [Yersinia bercovieri ATCC
           43970]
          Length = 251

 Score =  114 bits (286), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 42/251 (16%), Positives = 83/251 (33%), Gaps = 11/251 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A+N++N  T GFR        V   I        + V 
Sbjct: 1   MDHAIYTAMGAARQSLDQQAVTANNLANASTPGFRAQLSAMRAV--PIDGPSMATRTMVV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSA-- 117
           +    +    G+   +G  LD AL+ D + A++ P      TR+G  +V  +G +     
Sbjct: 59  ASTPGVDISQGTINFSGRPLDVALQQDGYLAVQLPDGTEAYTRNGNIQVAANGQMTVQGY 118

Query: 118 --SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
              G    +++          D   +    G+       +  +        +     +  
Sbjct: 119 PLMGDNGPIEVPPQAAVTIAADGTISALNAGDSPNTIAQLGQIKRVRATPGEVMHGDDGL 178

Query: 176 GISPNIP----PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
                         L +   + +  G LE SN  ++  M  MI   + F     +I   +
Sbjct: 179 FHLTPATQQARGAQLANDPLIKIMPGVLEGSNVKAVEAMTDMIANARSFEMQMKIIHSVD 238

Query: 232 KSMLEAIRNIA 242
           ++   A + +A
Sbjct: 239 ENEQRANQLLA 249


>gi|153946948|ref|YP_001399635.1| flagellar basal body rod protein FlgF [Yersinia pseudotuberculosis
           IP 31758]
 gi|152958443|gb|ABS45904.1| flagellar basal-body rod protein FlgF [Yersinia pseudotuberculosis
           IP 31758]
          Length = 243

 Score =  114 bits (286), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 51/244 (20%), Positives = 95/244 (38%), Gaps = 8/244 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       ++       +    A+N++NT+T GFR            +          V 
Sbjct: 1   MDKLLYTAVSGANRSLSQQQIHANNLANTNTQGFRADLE--KATATQVMGSGYNSRVAVL 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           S    +     S   TG +LD A++     A+ S    + TR+G+ +V+ DG  ++ +G 
Sbjct: 59  SQNAGVDMTPASLQETGRDLDIAVKNQGLIAVLSGGREVYTRNGQMEVSADGD-LTINGL 117

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSGI 177
             + D   + +       I + G    I Q G +     +     VD+    +R+ N G+
Sbjct: 118 PVLGDGGPIVLPPYSALSIADDGTIAIIPQAGGIKTPEEIERIKLVDIPANQLRKNNRGL 177

Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
             +    P      V V    LE SN +++ EM   I L+++F +   ++   E  + +A
Sbjct: 178 LVSNRG-PAARDEAVQVVNKHLESSNVSAISEMIASISLSRQFEAQIKMMKVAED-LAQA 235

Query: 238 IRNI 241
              +
Sbjct: 236 GNRM 239


>gi|89072314|ref|ZP_01158893.1| putative flagellar basal-body rod protein [Photobacterium sp.
           SKA34]
 gi|89051846|gb|EAR57298.1| putative flagellar basal-body rod protein [Photobacterium sp.
           SKA34]
          Length = 243

 Score =  114 bits (286), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 44/242 (18%), Positives = 90/242 (37%), Gaps = 4/242 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M +      +    + +     ++N+SN DT GFR    +   +   ++       + V 
Sbjct: 1   MDSFLYTATSGASRVMKAQHVRSNNLSNADTAGFRADMERVKSI--PLQGAGFDGRTMVV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119
           +       + G  I TG  LD A+ GD +F +++       TR G  +V D G +     
Sbjct: 59  TNSAATRFDAGDVIKTGRALDIAINGDGFFTVQTVAGNEAYTRAGNIRVDDQGMMRVNGF 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                  A V  +    D              G  +    L  V+     +++++ G+  
Sbjct: 119 PLMSEGEALVLPEHQAVDISDKGVVSIVPLGGGAELEVGQLKLVNPEFNQLQKQSDGLLH 178

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +          V +  G LE SN +++ E+  ++ LT+ F     ++    +++ +A  
Sbjct: 179 PVNDQFFAQDPSVAMTAGHLEGSNVSAINELVSVMSLTRNFEMQVRMMKTA-ETLAQAGT 237

Query: 240 NI 241
            +
Sbjct: 238 RL 239


>gi|238793999|ref|ZP_04637617.1| Flagellar basal-body rod protein flgF [Yersinia intermedia ATCC
           29909]
 gi|238726631|gb|EEQ18167.1| Flagellar basal-body rod protein flgF [Yersinia intermedia ATCC
           29909]
          Length = 251

 Score =  114 bits (286), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 87/252 (34%), Gaps = 13/252 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A     ++ +  A+N++N  T GFR        V   I        + V 
Sbjct: 1   MDHAIYTAMGAARQSLEQQAVTANNLANASTPGFRAQLSAMRAV--PIDGPSMATRTMVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +    +    G+   +G  LD AL+ D + A++ P      TR+G  +V  +G + +  G
Sbjct: 59  ASTPGVDISQGTMNYSGRPLDVALQQDGYLAVQLPDGTEAYTRNGNIQVAANGQM-TVQG 117

Query: 120 KYPVLDM---ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
              + D       P           +           +     +  V  + G V   + G
Sbjct: 118 YPLMGDNGPIEVPPQAAVTIAADGTISALNAGDSPNTIAQLGQIKRVRANAGEVMHGDDG 177

Query: 177 IS------PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
           +              L +   + +  G LE SN  ++  M  MI   + F     +I   
Sbjct: 178 LFHLTPATQQARGAQLANDPLIKIMPGVLEGSNVKAVEAMTDMIANARSFEMQMKVIHSV 237

Query: 231 EKSMLEAIRNIA 242
           +++   A + +A
Sbjct: 238 DENEQRANQLLA 249


>gi|84514825|ref|ZP_01002188.1| flagellar basal-body rod protein FlgG [Loktanella vestfoldensis
           SKA53]
 gi|84510984|gb|EAQ07438.1| flagellar basal-body rod protein FlgG [Loktanella vestfoldensis
           SKA53]
          Length = 273

 Score =  114 bits (286), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 42/267 (15%), Positives = 82/267 (30%), Gaps = 37/267 (13%)

Query: 10  AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI---DQKISFVASGKEYL 66
           +        ++ V++N++N+ T  FR     FS++      D      K           
Sbjct: 7   SGMATSMFEIAVVSNNVANSGTTAFRKSNTSFSDLYSGGSADSVARLSKGVGSIVDGTKQ 66

Query: 67  SKEVGSFISTGTELDFALEGDAWFALESPRGII-------LTRDGRFKVTDDGSLVSASG 119
           S E G  ++    L+ AL G   F   +P            TRDG F +  DG L +++ 
Sbjct: 67  STEQGGLLTRDGVLNLALIGKGMFVSAAPSATAGAIGTISYTRDGEFSLDKDGQLRTSTN 126

Query: 120 KYPVL----------------------DMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157
            + +                       D          +            S   +++ T
Sbjct: 127 DFVMGYGPGVTPAEATPLVNLKVPVKKDGDGGAQLTALEIGTDGKLMATYGSAPAELLGT 186

Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQ 212
           + + S        +   +           +           ++ G LE SN +   E+  
Sbjct: 187 IAIASFPNEIALRQIGMNRFLATDGAGTPKIGVGGQDGFGMIQSGTLETSNVDLTIELTD 246

Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIR 239
           MI   Q+F+  + ++      + +  R
Sbjct: 247 MIRAQQQFSGSSRILQTYSDMIEKLTR 273


>gi|294853175|ref|ZP_06793847.1| flagellar basal-body rod protein FlgG [Brucella sp. NVSL 07-0026]
 gi|294818830|gb|EFG35830.1| flagellar basal-body rod protein FlgG [Brucella sp. NVSL 07-0026]
          Length = 210

 Score =  114 bits (286), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 38/194 (19%), Positives = 65/194 (33%), Gaps = 7/194 (3%)

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSL 114
              V +         GSF  TG   D AL G  WF ++SP    + TR G F    DG L
Sbjct: 17  GLGVQTAAVRNLHIQGSFNQTGNPYDVALTGRGWFQIQSPTGETLYTRAGAFNKNADGQL 76

Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGE-KGEISQKGKVIATMGLYSVDMSQGFVRRE 173
           V+  G      +   P  I            K +       +  + L +     G     
Sbjct: 77  VTLDGNPVEPAITIPPDAIEVTITDTGQVFAKLQDQINQVDLGQLTLANFTNEAGLEPLG 136

Query: 174 NSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228
            +                      ++K+G+LE SN + + E+  +I   + +   + +I 
Sbjct: 137 GNLYRETEASGGPLVGVPGDPGYGSIKQGYLEASNVDPVKEITDLITAQRAYEMNSKVIQ 196

Query: 229 ENEKSMLEAIRNIA 242
             ++      +N+ 
Sbjct: 197 AADEMAATVSKNLR 210


>gi|317130722|ref|YP_004097004.1| flagellar hook-basal body protein [Bacillus cellulosilyticus DSM
           2522]
 gi|315475670|gb|ADU32273.1| flagellar hook-basal body protein [Bacillus cellulosilyticus DSM
           2522]
          Length = 279

 Score =  114 bits (286), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 49/276 (17%), Positives = 95/276 (34%), Gaps = 36/276 (13%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             S          ++++L TV +N++N +T G++   V FS+++    N+          
Sbjct: 5   NQSMITSAVTMGQMQRKLDTVGNNLANLNTTGYKRRDVSFSDLLFQQVNNQRDAHHEIGR 64

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI---ILTRDG 104
                 +  S  A G+  +  E G+  +T  ELD AL    +    +P        TRDG
Sbjct: 65  TTPNGIRVGSGSAVGQTAVRMEQGALRTTERELDIALTEKGYLFELAPAEDGTRRFTRDG 124

Query: 105 RFKV------TDDGSLVSASGKYPVLDMASVP----IQIPQKDEIFNVGEKGEISQKGKV 154
            F          +  +V+ +G Y +    +           +            + +   
Sbjct: 125 AFYFSPNPDVDGENFIVNQNGDYVLGSDGNPIAVPGHYESLRITDEGAILVTLDNGESVA 184

Query: 155 IATMGLYSVDMSQGFVRRENSGI-SPNIPPTPLEDLSGVT-------VKRGFLEDSNANS 206
           +  + L  V   Q      ++    PN+    L     +          +G LE SN + 
Sbjct: 185 VGELQLVQVTKPQLLTSLGDNMYVFPNLEELGLAFGDVLNEAAGAQVFSQGMLEQSNVDM 244

Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
             EM +M+   + +   +  I   ++ M   +  I 
Sbjct: 245 GREMTEMMLTQRNYQFNSRAISIADEMMG-LVNTIR 279


>gi|257876010|ref|ZP_05655663.1| flagellar basal-body rod protein flgG [Enterococcus casseliflavus
           EC20]
 gi|257810176|gb|EEV38996.1| flagellar basal-body rod protein flgG [Enterococcus casseliflavus
           EC20]
          Length = 260

 Score =  114 bits (285), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 41/245 (16%), Positives = 84/245 (34%), Gaps = 16/245 (6%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA---------IKNDIDQK 55
             I  +    L+  L T A+N++N +T G++     F  ++             N     
Sbjct: 7   LGISRSGLNHLQTNLDTTANNIANVNTNGYQAQTTHFQALMENAIGAEETLFNGNAAQYG 66

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSL 114
            S  A      S   G+   T   LD A++G+ +F +    G +L +R G F ++++  L
Sbjct: 67  ASMGAKATTTTSFAQGNLAGTTQPLDLAIQGNGFFGVRDQTGQLLLSRAGNFHLSENKQL 126

Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174
           V++ G    +       Q P   +I         +++      +G  ++           
Sbjct: 127 VNSEGYPVAMTTNVPTPQWPDAQQIAIDASGQLTTEENGQTRVLGQLTLYQPTNTENITP 186

Query: 175 SGISPNIPPTP------LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228
            G                   +  +V +G LE S  +    M  ++   + +   T  + 
Sbjct: 187 VGNQLYRAGDQALLTSQTNPAAFGSVLQGQLEQSTVDLATSMTDLLTTQRAYGLNTKAMQ 246

Query: 229 ENEKS 233
             ++ 
Sbjct: 247 TADEM 251


>gi|257866397|ref|ZP_05646050.1| flagellar basal-body rod protein flgG [Enterococcus casseliflavus
           EC30]
 gi|257873087|ref|ZP_05652740.1| flagellar basal-body rod protein flgG [Enterococcus casseliflavus
           EC10]
 gi|257800355|gb|EEV29383.1| flagellar basal-body rod protein flgG [Enterococcus casseliflavus
           EC30]
 gi|257807251|gb|EEV36073.1| flagellar basal-body rod protein flgG [Enterococcus casseliflavus
           EC10]
          Length = 260

 Score =  114 bits (285), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 41/245 (16%), Positives = 84/245 (34%), Gaps = 16/245 (6%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA---------IKNDIDQK 55
             I  +    L+  L T A+N++N +T G++     F  ++             N     
Sbjct: 7   LGISRSGLNHLQTNLDTTANNIANVNTNGYQAQTTHFQALMENAIGAEETLFNGNAAQYG 66

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSL 114
            S  A      S   G+   T   LD A++G+ +F +    G +L +R G F ++++  L
Sbjct: 67  ASMGAKATTTTSFAQGNLAGTAQPLDLAIQGNGFFGVRDQTGQLLLSRAGNFHLSENKQL 126

Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174
           V++ G    +       Q P   +I         +++      +G  ++           
Sbjct: 127 VNSEGYPVAMTTNVPTPQWPDAQQIAIDASGQLTTEENGQTRVLGQLTLYQPTNTENITP 186

Query: 175 SGISPNIPPTP------LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228
            G                   +  +V +G LE S  +    M  ++   + +   T  + 
Sbjct: 187 VGNQLYRAGDQALLTSQTNPAAFGSVLQGQLEQSTVDLATSMTDLLTTQRAYGLNTKAMQ 246

Query: 229 ENEKS 233
             ++ 
Sbjct: 247 TADEM 251


>gi|114570496|ref|YP_757176.1| flagellar basal body rod protein [Maricaulis maris MCS10]
 gi|114340958|gb|ABI66238.1| flagellar basal body rod protein [Maricaulis maris MCS10]
          Length = 249

 Score =  114 bits (285), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 64/247 (25%), Positives = 113/247 (45%), Gaps = 5/247 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFR--TIKVKFSEVVGAIKNDIDQKISF 58
           M  +  IGL+ Q+ L + +  VA+N++N +T GF+  ++ ++      A  +D    I F
Sbjct: 1   MDNAMMIGLSRQMTLRRSMDVVANNIANANTAGFKVESLLLENRAAPTATHDDGPADIQF 60

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSAS 118
           V +         G    TG E D A++G  +FA+ES      TRDGRF++   G LV++ 
Sbjct: 61  VNTWGMARDFRQGELAFTGREFDLAIDGGGFFAVESNGEEQFTRDGRFRLDGAGQLVASD 120

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178
           G   +      PI I        + E G I Q  + I  +G++ +       ++ N   +
Sbjct: 121 GAPVLDADTRGPILIDASAGSVQIVEGGMIMQNDQQIGRIGVFEIANRSEMSKQGNGRYT 180

Query: 179 PNIPPTPLEDLS---GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
                 P  +       TV +GF+E SN  S+ E+  M+ + + + S++  +++ E    
Sbjct: 181 IPPIEDPANEPLAMIDATVSQGFVEQSNVQSILELTDMMSVMRSYQSVSKFLEQAEDLSK 240

Query: 236 EAIRNIA 242
            AI  + 
Sbjct: 241 RAIERLG 247


>gi|325288804|ref|YP_004264985.1| fagellar hook-basal body protein [Syntrophobotulus glycolicus DSM
           8271]
 gi|324964205|gb|ADY54984.1| fagellar hook-basal body protein [Syntrophobotulus glycolicus DSM
           8271]
          Length = 256

 Score =  114 bits (285), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 36/246 (14%), Positives = 80/246 (32%), Gaps = 20/246 (8%)

Query: 12  QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK-------- 63
              L+ RL  V +N++N +T  F+   +   E +   +    + +    +          
Sbjct: 8   MNLLQSRLDMVGNNLANANTTAFKQQLLSEEEGMDTQELSKSRAMYGGVAPGIAADQTAL 67

Query: 64  -----EYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSA 117
                       G+ + +    + A+ G+ +F + +       TR G F    +G +V+ 
Sbjct: 68  PVYNGNRFDFSQGTLVQSDQPQNMAISGEGFFQVAAANGRTGYTRAGNFGPDGNGRIVNP 127

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177
            G    L                +      +  +   +  + L   +   G  +  +   
Sbjct: 128 QGLLLELGAEIPENA-SDLSIGSDGKITAVVDDELTELGQLTLARFENPHGLQQAGDDIY 186

Query: 178 SPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
                  P    +  T     ++ G LE SN ++   M  MI   + +     +  + ++
Sbjct: 187 LETDQSGPPLTGNPGTEGFGQIQGGMLERSNTDTAKAMSNMIEAQRAYQIEIGITKDQDQ 246

Query: 233 SMLEAI 238
            + EAI
Sbjct: 247 MIAEAI 252


>gi|260597446|ref|YP_003210017.1| flagellar basal body rod protein FlgF [Cronobacter turicensis
           z3032]
 gi|260216623|emb|CBA29919.1| Flagellar basal-body rod protein flgF [Cronobacter turicensis
           z3032]
          Length = 252

 Score =  114 bits (285), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 47/253 (18%), Positives = 85/253 (33%), Gaps = 17/253 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + S  A N++N  T GFR        V   ++       + V 
Sbjct: 1   MDHAIYTAMGAASQTLNQQSVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEG-DAWFALESPR-GIILTRDGRFKVTD------DG 112
           +    ++   GS   T   LD A++G D W A+++P      TR+G  + T        G
Sbjct: 59  ASTPGVNMSQGSLDYTSRPLDVAIQGSDGWLAVQAPDGTEAYTRNGNIQRTATGQLTIQG 118

Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG----KVIATMGLYSVDMSQG 168
           + V   G   V+   +                    +       K++       V    G
Sbjct: 119 NPVMGEGGPVVVPEGAEVTIAADGTISVLNPGDAPNTIAPVGRLKMVKASAQEVVRGDDG 178

Query: 169 FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228
             R   +  +       L+    +++  G LE SN   +  M  MI   ++F     +I 
Sbjct: 179 LFRL--NQQAQTARGATLQADPTISLMSGVLEGSNVKPVEAMTDMIANARRFEMQMKIIS 236

Query: 229 ENEKSMLEAIRNI 241
             +++   A   +
Sbjct: 237 SVDENEQRA-NQL 248


>gi|327478810|gb|AEA82120.1| flagellar basal-body rod protein FlgF [Pseudomonas stutzeri DSM
           4166]
          Length = 234

 Score =  114 bits (285), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 45/225 (20%), Positives = 84/225 (37%), Gaps = 2/225 (0%)

Query: 9   LAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSK 68
           + A       L   ++N++N +T GFR    +   V  A++                +S 
Sbjct: 1   MTAASRTMMSLQVRSNNLANVNTPGFRADLERAQAV--AVEGYGYDSRHMALIENNGVSL 58

Query: 69  EVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMAS 128
             G  ++TG ELDFA++G+    LE   G   TR G  +V  +G L              
Sbjct: 59  AAGPMVATGRELDFAVKGNGLIVLEDGEGEAYTRQGSMQVDAEGRLTLNGRAVLGEGGPI 118

Query: 129 VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED 188
           V  +  + +   +            +     +  VD+    + +  +G+       P + 
Sbjct: 119 VLPEYDRMEIGNDGTVSIMAPGDWMMAEVDRIRLVDVPAANLMKNQAGLLVTRDGEPAQP 178

Query: 189 LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
              V +  GFLE SN +++ E+   + L + F +   ++   E  
Sbjct: 179 SEDVRLASGFLESSNVSAIDELASTMSLNRLFETQVKMMKAAEDL 223


>gi|157694039|ref|YP_001488501.1| flagellar hook-basal body protein [Bacillus pumilus SAFR-032]
 gi|194016453|ref|ZP_03055067.1| flagellar hook-basal body complex protein FlhP [Bacillus pumilus
           ATCC 7061]
 gi|157682797|gb|ABV63941.1| flagellar hook-basal body protein [Bacillus pumilus SAFR-032]
 gi|194011926|gb|EDW21494.1| flagellar hook-basal body complex protein FlhP [Bacillus pumilus
           ATCC 7061]
          Length = 272

 Score =  114 bits (285), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 46/273 (16%), Positives = 103/273 (37%), Gaps = 32/273 (11%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +      +   ++++L  +++N++N++T G+R    +FSE++    N +D+K + VA
Sbjct: 1   MLRTMINAAVSMNEVQKQLDIISNNIANSETTGYRAKNTRFSELIRQQFNQVDEKNAQVA 60

Query: 61  SGKEYL---------------SKEVGSFISTGTELDFALEGD-AWFALESPRGIILTRDG 104
           + +                  +   GS   TG +LD A      +  +     I  TRDG
Sbjct: 61  NSRLTPDGLRLGTGTMVNASINSLQGSIKETGRDLDVAFGAPSQYMQVNVGGNIRYTRDG 120

Query: 105 RFK----VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEIS-----QKGKVI 155
                     +   +  S  +P+LD     I +       ++ + G ++      +    
Sbjct: 121 SLYLQPGNNRNQVQLVTSEGHPILDENGNEIVLNANFRDISIDKNGRLTAISRDNQPNQQ 180

Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV------TVKRGFLEDSNANSMYE 209
             +G+  V+ S   V   ++  S +                   +++G LE SN +   E
Sbjct: 181 VNLGVVQVNNSSALVSEGDNLFSVDGTYQGALTALNGANRQAIQLQQGALETSNVDMSKE 240

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           +  ++   + +   +  I   ++ +   +  I 
Sbjct: 241 LTDLMTTQRSYQMNSRTITMGDQMLG-LVNTIR 272


>gi|238788316|ref|ZP_04632110.1| Flagellar basal-body rod protein flgF [Yersinia frederiksenii ATCC
           33641]
 gi|238723562|gb|EEQ15208.1| Flagellar basal-body rod protein flgF [Yersinia frederiksenii ATCC
           33641]
          Length = 251

 Score =  114 bits (284), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 42/251 (16%), Positives = 83/251 (33%), Gaps = 11/251 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A     +  +  A+N++N  T GFR        V   I        + V 
Sbjct: 1   MDHAIYTAMGAARQSLELQAVTANNLANASTPGFRAQLAAMRAV--PIDGPSMATRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSA-- 117
           +    +    G+   +G  LD AL+ D + A++ P      TR+G  +V  +G +     
Sbjct: 59  ASTPGVDISQGTMNYSGRPLDVALQQDGYLAVQLPDGTEAYTRNGNIQVGANGQMTVQGY 118

Query: 118 --SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
              G    +++          D   +    G+       +  +        +     +  
Sbjct: 119 PLMGDNGPIEVPPQAAVTIAADGTISALNAGDSPNTIAQLGQIKRVRATAGEVMHGDDGL 178

Query: 176 GISPNIP----PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
                         L +   + +  G LE SN  ++  M  MI   + F     +I   +
Sbjct: 179 FHLTPAAQQTRGAQLANDPLIKIMPGVLEGSNVKAVEAMTDMIANARSFEMQMKVIHSVD 238

Query: 232 KSMLEAIRNIA 242
           ++   A + +A
Sbjct: 239 ENEQRANQLLA 249


>gi|84514832|ref|ZP_01002195.1| flagellar proximal rod protein FlgF [Loktanella vestfoldensis
           SKA53]
 gi|84510991|gb|EAQ07445.1| flagellar proximal rod protein FlgF [Loktanella vestfoldensis
           SKA53]
          Length = 253

 Score =  114 bits (284), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 43/241 (17%), Positives = 84/241 (34%), Gaps = 8/241 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV-VGAIKNDIDQKISFV 59
           M  + +I L     +   L   A NM+N +  GFR       E       +    ++   
Sbjct: 1   MDRNIHIALNNLRNISSELRVNAQNMANANVPGFRADLSVTREASFLTPFDQFRSRVYSQ 60

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRFKVTDDGSLVSA 117
            + +   S + G   +T  E+D A++G  +F +         L+R G      D  +V  
Sbjct: 61  EASQSLFSTDEGGLQNTEAEMDLAIQGQGYFYIAPSSGGDTALSRRGDLSFDLDRFVVDG 120

Query: 118 SGKYPVLDMASVPI-----QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172
           +G   +    +        +I  ++      E  +  +   V   +   S        + 
Sbjct: 121 AGNKLLDVALNPIQLPPTRRIVVEETGQIQMELLDAPEGTFVAGPIIATSQADDVVLSKS 180

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            +  I P       E      + +GFLE+SN +++  + Q I   ++F      I   ++
Sbjct: 181 PDGHIRPVGQADLPEPDQRARLTQGFLENSNVDTIGSLIQNIESQRQFEMSVKFIALAQE 240

Query: 233 S 233
            
Sbjct: 241 I 241


>gi|315180484|gb|ADT87398.1| hypothetical flagellar basal-body rod protein [Vibrio furnissii
           NCTC 11218]
          Length = 244

 Score =  114 bits (284), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 40/244 (16%), Positives = 90/244 (36%), Gaps = 6/244 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M             +       A+N+++ +TVGF+   ++ S+ +    +     ++   
Sbjct: 1   MNPILFTAAKGAERVMLAQEVRANNLAHANTVGFK-SLMEHSDAMAVAGSGFQSSVT-TR 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFA---LESPRGIILTRDGRFKVTDDGSLVSA 117
           +     +   G+ + TG +LD  + G  +F+          + +R G F+++ DG L+  
Sbjct: 59  TNSASTNFTPGAEVRTGRDLDVQIPGRGFFSVAGQAGEPEELYSRAGNFRLSSDGLLLLG 118

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177
             +    D      +    +   +          G  +    L  V+     +    SG+
Sbjct: 119 DRQVLGEDGPIEVPEFQAINIASDGAISITPPGGGAEMQIGLLKLVNPEYADMTLHTSGL 178

Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                   L     V V+ G+LE SN +S+ E+  M+ LT+++      +    + + + 
Sbjct: 179 FVPKQGETLAFDPEVAVRSGYLEGSNVSSLDELVSMMALTRQYEMQVKAMASASE-IEKM 237

Query: 238 IRNI 241
              +
Sbjct: 238 GNQL 241


>gi|23012978|ref|ZP_00052943.1| COG4786: Flagellar basal body rod protein [Magnetospirillum
           magnetotacticum MS-1]
          Length = 213

 Score =  114 bits (284), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 57/215 (26%), Positives = 94/215 (43%), Gaps = 11/215 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA-----IKNDIDQK 55
           M  +  IGL+ QLALE+ +   A+N++N  T GF++   +F E +            D++
Sbjct: 1   MNNTLLIGLSHQLALERAMEVAANNVANVTTTGFKSRSAEFREYLMPGARVEAARPSDRR 60

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEG-DAWFALESPRGIILTRDGRFKVTDDGSL 114
           +S+V      L   VG    TG+ LD AL   +A+FA+++  G   TR+G F++   G L
Sbjct: 61  LSYVVDAATPLDLSVGQIERTGSPLDVALRDENAFFAVQTSGGERYTRNGAFQLNAAGDL 120

Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174
           V++ G   +      PI   +     ++G  G IS +      + L      +  V    
Sbjct: 121 VTSDGYTVLGTA--GPILFAKNTREISIGTDGTISTEQGPSGKLRLVQFADPERLVSAGG 178

Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYE 209
           +    +    P        ++ G LE SN N   E
Sbjct: 179 NLYQSST---PPRGAPASRLEVGSLERSNVNPFTE 210


>gi|238799108|ref|ZP_04642564.1| Flagellar basal-body rod protein flgF [Yersinia mollaretii ATCC
           43969]
 gi|238717055|gb|EEQ08915.1| Flagellar basal-body rod protein flgF [Yersinia mollaretii ATCC
           43969]
          Length = 251

 Score =  114 bits (284), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 86/252 (34%), Gaps = 13/252 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A+N++N  T GFR        V   I        + V 
Sbjct: 1   MDHAIYTAMGAARQSLDQQAVTANNLANASTPGFRAQLSAMRAV--PIDGPSMATRTMVV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +    +    G+   +G  LD AL+ D + A++ P      TR+G  +V  +G + +  G
Sbjct: 59  ASTPGVDISQGTINFSGRPLDVALQQDGYLAVQLPDGTEAYTRNGNIQVAANGQM-TVQG 117

Query: 120 KYPVLDM---ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
              + D       P           +           +     +  V  + G V   + G
Sbjct: 118 YPLMGDNGPIEVPPQAAVTIAADGTISALNAGDSPNTIAQLGQIKRVRATAGEVMHGDDG 177

Query: 177 IS------PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
           +              L +   + +  G LE SN  ++  M  MI   + F     +I   
Sbjct: 178 LFHLTPAAQQARGAQLANDPLIKIMPGVLEGSNVKAVEAMTDMIANARSFEMQMKIIHSV 237

Query: 231 EKSMLEAIRNIA 242
           +++   A + +A
Sbjct: 238 DENEQRANQLLA 249


>gi|89095666|ref|ZP_01168560.1| FlhP [Bacillus sp. NRRL B-14911]
 gi|89089412|gb|EAR68519.1| FlhP [Bacillus sp. NRRL B-14911]
          Length = 274

 Score =  114 bits (284), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 42/275 (15%), Positives = 94/275 (34%), Gaps = 34/275 (12%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M             L++++   + NM+N DT G++  +  F++++     +         
Sbjct: 1   MSRMMITATNTLAQLQKQMDITSHNMANVDTTGYKRREATFTDLLVQQFANQPNSADENR 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA-----LESPRGIILTR 102
                 ++ +     +  +    GS  +T  +LD A   +          E+   +  TR
Sbjct: 61  LTPNGLRQGTGAMLAQSQIVMAQGSIKTTDRQLDTAFTKENQLYKVLVQTETGSEVQYTR 120

Query: 103 DGRFK----VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158
           DG F        +  LV+++G   + +  +      Q  E          ++        
Sbjct: 121 DGAFYLTPVSDTESMLVTSAGNAVLDENDNPIYINGQPGEFAITENGILTAKDSTGQEQE 180

Query: 159 ---GLYSVDMSQGFVRRENSGISPNIPPTPLEDL--------SGVTVKRGFLEDSNANSM 207
              G+  V+  Q   ++  + ++       ++ L            V++  LE SN N  
Sbjct: 181 FSLGIVRVNKPQFLQQQGGNLLALAAGADGIDVLTDLTGALRGEAGVQQRALEQSNVNMQ 240

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            EM  +I + + +   +  I   ++ M   +  I 
Sbjct: 241 KEMTDLITVQRAYQFQSRAISMADQMMG-LVNGIR 274


>gi|109947349|ref|YP_664577.1| flagellar basal-body rod protein FlgG [Helicobacter acinonychis
           str. Sheeba]
 gi|109714570|emb|CAJ99578.1| flagellar basal-body rod protein FlgG [Helicobacter acinonychis
           str. Sheeba]
          Length = 269

 Score =  114 bits (284), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 52/255 (20%), Positives = 94/255 (36%), Gaps = 26/255 (10%)

Query: 14  ALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDID--------------QKI 56
               RL  V++N++N +T GF+        F  +    +  +                  
Sbjct: 14  TQFNRLDLVSNNLANLNTNGFKRDDTITSDFLRLYQQYQEQLPLKDQTKASAKYLNRNLN 73

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTRDGRFKVTDDGSLV 115
                 + Y  K +G+F  T   LDFAL   + +FA+++  GI  TRDG F +  DG LV
Sbjct: 74  RVPILSEIYTDKSLGAFEETHNPLDFALTSPNLYFAIQTNEGIAYTRDGHFSIDKDGFLV 133

Query: 116 SASGKYP---VLDMASVPIQIPQKDEIFNVGEKGEISQKGK---VIATMGLYSVDMSQGF 169
           + +G              I +    EI      G      +       + L S    +  
Sbjct: 134 TLNGFKVLSRSGLNEQGGIMLMPNTEIEVDQNGGITFSDNEAQIQAGALALVSFSEPKNL 193

Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
            +   +  +           S   +++  LE SN N++ EM  +I + +  +  + ++  
Sbjct: 194 KKIGQNLYTYQGEGIHQVSDSNA-LRQYMLEKSNVNAVREMSALIEINRFLDMYSKVLKT 252

Query: 230 -NEKSMLEAIRNIAS 243
             +    EAI  +A+
Sbjct: 253 HQDDMNAEAINKLAT 267


>gi|83646789|ref|YP_435224.1| flagellar basal body rod protein [Hahella chejuensis KCTC 2396]
 gi|83634832|gb|ABC30799.1| Flagellar basal body rod protein [Hahella chejuensis KCTC 2396]
          Length = 235

 Score =  114 bits (284), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 49/231 (21%), Positives = 95/231 (41%), Gaps = 9/231 (3%)

Query: 12  QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
             A  +RL T++ N+SN     ++  ++   +   A  +    +  F            G
Sbjct: 12  LNADLERLRTISQNLSNQGAPAYKRDQMIVEKFQAAYLSGAKLEPEF----SLQKDFTQG 67

Query: 72  SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPI 131
           +F  TG  +D AL+G+ +    S      TR G+ ++  DG L   +G+  +        
Sbjct: 68  AFKLTGNAMDIALDGEGFLMASSSDKTFFTRKGQMRLNPDGYLGLVTGERLL----GRSG 123

Query: 132 QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSG 191
            I   D  F V   G + Q G V+  + + +    +       +G+  N       + +G
Sbjct: 124 PIALNDADFVVQPDGSVVQDGVVLDKLAVVTFQHPEQL-SYAGAGLFENPTKQAPTEATG 182

Query: 192 VTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
             V + +LE SN N+M E+ +++ LT+ +     ++   + S+  AI  + 
Sbjct: 183 AQVMQSYLEMSNVNTMEEIVRLVELTRHYQLSHNVLKAYDGSIDSAISTLG 233


>gi|325567512|ref|ZP_08144179.1| hypothetical protein HMPREF9087_0468 [Enterococcus casseliflavus
           ATCC 12755]
 gi|325158945|gb|EGC71091.1| hypothetical protein HMPREF9087_0468 [Enterococcus casseliflavus
           ATCC 12755]
          Length = 260

 Score =  114 bits (284), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 41/245 (16%), Positives = 85/245 (34%), Gaps = 16/245 (6%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA---------IKNDIDQK 55
             I  +    L+  L T A+N++N +T G++     F  ++             N     
Sbjct: 7   LGISRSGLNHLQTNLDTTANNIANVNTNGYQAQTTHFQALMENAIGAEETLFNGNAAQYG 66

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSL 114
            S  A      S   G+   T   LD A++G+ +F +    G +L +R G F ++++  L
Sbjct: 67  ASMGAKATTTTSFAQGNLAGTAQPLDLAIQGNGFFGVRDQTGQLLLSRAGNFHLSENKQL 126

Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174
           V++ G    +       Q P   +I         +++      +G  ++          +
Sbjct: 127 VNSEGYPVAMTTNVPTAQWPDVQQIAIDASGQLTTEENGQTRVLGQLTLYQPTNTENITS 186

Query: 175 SGISPNIPPTP------LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228
            G                   +  +V +G LE S  +    M  ++   + +   T  + 
Sbjct: 187 VGNQLYSAGDQALLTSQTNPAAFGSVLQGQLEQSTVDLATSMTDLLTTQRAYGLNTKAMQ 246

Query: 229 ENEKS 233
             ++ 
Sbjct: 247 TADEM 251


>gi|218290051|ref|ZP_03494218.1| protein of unknown function DUF1078 domain protein
           [Alicyclobacillus acidocaldarius LAA1]
 gi|218239885|gb|EED07073.1| protein of unknown function DUF1078 domain protein
           [Alicyclobacillus acidocaldarius LAA1]
          Length = 262

 Score =  113 bits (283), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 85/252 (33%), Gaps = 17/252 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56
           M      GL+   A    +  +ADN++N  T G+   +  F++++               
Sbjct: 1   MGQMMWNGLSGIQAANAWIDQIADNLANLQTPGYAAEQGTFADLLTMQVYGNATDPSAAD 60

Query: 57  ----------SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106
                     + V    E       + + TG     A+EG  +F +++P G + TR G F
Sbjct: 61  RLTPPGWRGGTGVVRTGEERDFSQAAVVRTGIPTHLAIEGPGFFVVQTPSGRMYTRAGNF 120

Query: 107 KVT---DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
             +   D   +++     PVL  A   I  P      +V   G I         +GL  +
Sbjct: 121 IWSRRSDGSFVLATQAGDPVLSAAGQLIVKPADAPSMSVARDGTIQFGRGRTVKLGLVEI 180

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223
                 +  E +G+               +V +G +  SN +    M Q++     +   
Sbjct: 181 GEPSSHLIPEGNGLYRLASGGVAVPARNSSVIQGAVNASNVDETAAMAQLVAAQDFYEEN 240

Query: 224 TTLIDENEKSML 235
              I    + + 
Sbjct: 241 AQAISMANQLLG 252


>gi|89092137|ref|ZP_01165092.1| flagellar basal-body rod protein FlgF [Oceanospirillum sp. MED92]
 gi|89083872|gb|EAR63089.1| flagellar basal-body rod protein FlgF [Oceanospirillum sp. MED92]
          Length = 247

 Score =  113 bits (283), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 46/243 (18%), Positives = 94/243 (38%), Gaps = 7/243 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + ++            A+N++N +T GF+    +   +   +  +      +  
Sbjct: 1   MDKVLYLAMSGARENMLAQQAHANNLANANTTGFKADLAQARAM--QVFGEGHASRVYAQ 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           + +       G+ I TG +LD ++ GD W  +  P      TR G  ++     LV+ SG
Sbjct: 59  TERPATDVTHGTLIDTGRKLDVSVTGDGWLTVIRPDGTEGYTRAGSLQINAASQLVTGSG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK----VIATMGLYSVDMSQGFVRRENS 175
              + +     +  P ++          +   G+    ++    L  V+     V +   
Sbjct: 119 LPVMGNGGIPIVLPPFENIEIATNGTITVRPLGENATELLVADQLKLVNPDPASVFKGPD 178

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
           G+       PLE    V V+ G+LE SN N++ E+  +I  +++F     ++   E++  
Sbjct: 179 GLMITGDQVPLEPDPAVQVRSGYLEASNVNAVSELTGIITSSRQFEMQIKMMKTAEENSE 238

Query: 236 EAI 238
            A 
Sbjct: 239 SAA 241


>gi|304397205|ref|ZP_07379084.1| flagellar basal-body rod protein FlgF [Pantoea sp. aB]
 gi|304355354|gb|EFM19722.1| flagellar basal-body rod protein FlgF [Pantoea sp. aB]
          Length = 251

 Score =  113 bits (283), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 48/251 (19%), Positives = 88/251 (35%), Gaps = 14/251 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   +        + VA
Sbjct: 1   MDHAIYTAMGAASQTLDQQAVTASNLANASTPGFRAQLNALRAV--PVSGWSLPTRTLVA 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G+   T   LD A++ D W A+ +       TR+G  +++  G  ++  G
Sbjct: 59  ASTPGADMSQGAMDYTERPLDVAVQQDGWLAVRTADGSEAYTRNGNMQISPTG-TLTVQG 117

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV----DMSQGFVRRENS 175
              + D   + I    +  I   G    ++      AT+ L  +       Q   R ++ 
Sbjct: 118 NPVMGDGGPIVIPQGTEITIAADGSITGLNAGDSPNATVQLGKLKLVRATGQELQRSDDG 177

Query: 176 GISPNIP-----PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
              P           L+    + V  G LE SN   +  M  MI   ++F     +I   
Sbjct: 178 MFRPTASTQATRGAALQADPTMQVMPGVLEGSNVKPVETMVDMIANARRFEMQMKVITNV 237

Query: 231 EKSMLEAIRNI 241
           +++  +A   +
Sbjct: 238 DENEQKA-NQL 247


>gi|224170008|ref|XP_002339332.1| predicted protein [Populus trichocarpa]
 gi|222874887|gb|EEF12018.1| predicted protein [Populus trichocarpa]
          Length = 251

 Score =  113 bits (283), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 54/249 (21%), Positives = 91/249 (36%), Gaps = 18/249 (7%)

Query: 12  QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV-----------------VGAIKNDIDQ 54
                QRL     N++N  T G++   V    +                   A       
Sbjct: 1   MQQDMQRLDRTGLNLANALTPGYQREVVSARPLRLGAPSFAAMVGTAAAAAVADNAPAAS 60

Query: 55  KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSL 114
             +  A          G+  STG  LD AL G  +F + +P G   TR G F++   G L
Sbjct: 61  PHAPAAGLLVQTDHRPGTLRSTGQNLDVALAGAGYFEVSTPGGPAYTRQGSFRLDAQGRL 120

Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ-GFVRRE 173
           V+A G   +     + +Q  Q                        L  V+  Q   +RR 
Sbjct: 121 VTAQGHAVMGRGGEILLQSSQVRIDAQGNIFDGDGVGRTDRPVAQLKVVEAPQPSQLRRL 180

Query: 174 NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
             G+            + + +++GF+E+SN +SM+EM Q++   + F S+  +    ++ 
Sbjct: 181 GEGLMSIDGQPGQLADADIRIQQGFVENSNVSSMHEMVQLMQTMRHFESMQKVALGYDEM 240

Query: 234 MLEAIRNIA 242
             +AIR + 
Sbjct: 241 TGQAIRKLG 249


>gi|238751763|ref|ZP_04613251.1| Flagellar basal-body rod protein flgF [Yersinia rohdei ATCC 43380]
 gi|238710034|gb|EEQ02264.1| Flagellar basal-body rod protein flgF [Yersinia rohdei ATCC 43380]
          Length = 251

 Score =  113 bits (283), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 47/252 (18%), Positives = 86/252 (34%), Gaps = 13/252 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A     +  +  A+N++N  T GFR        V   I        + V 
Sbjct: 1   MDHAIYTAMGAARQSLELQAVTANNLANASTPGFRAQLAAMRAV--PIDGPSMPTRTMVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +    +    G+   +G  LD AL+ D + A++ P      TR+G  +V  +G + +  G
Sbjct: 59  ASTPGVDISQGTMNYSGRPLDVALQQDGYLAVQLPDGTEAYTRNGNIQVAANGIM-TVQG 117

Query: 120 KYPVLDM---ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
              + D       P           +           +     +  V  + G V   + G
Sbjct: 118 YPLMGDNGPIEVPPQAAVTIAADGTISALNAGDSPNTIAQLGQIKRVKATAGEVMHGDDG 177

Query: 177 IS------PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
           +              L +   V +  G LE SN  ++  M  MI   + F     +I   
Sbjct: 178 LFHLTAATQQARGAQLANDPLVKIMPGVLEGSNVKAVEAMSDMIANARSFEMQMKVIHSV 237

Query: 231 EKSMLEAIRNIA 242
           +++   A + +A
Sbjct: 238 DENEQRANQLLA 249


>gi|299538001|ref|ZP_07051287.1| flagellar hook-basal body complex protein [Lysinibacillus
           fusiformis ZC1]
 gi|298726583|gb|EFI67172.1| flagellar hook-basal body complex protein [Lysinibacillus
           fusiformis ZC1]
          Length = 279

 Score =  113 bits (283), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 42/280 (15%), Positives = 93/280 (33%), Gaps = 39/280 (13%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ------ 54
           M  +          L+ +L T+++N++N++T G++T +  F+E++    N+  Q      
Sbjct: 1   MLRTMITATNTMGQLQNKLDTISNNIANSNTTGYKTKEASFNELLYQQFNNDKQDRAERQ 60

Query: 55  ------KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA------LESPRGIILTR 102
                   S    G+   +++ GS  +T  +LD A      +        E+    + TR
Sbjct: 61  TPVGIRYGSGAMVGQIKSNEKQGSLQTTNRDLDLAFTKAKQYFNILMPDGENGTETVYTR 120

Query: 103 DGRFKVTDDGSLV------------SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ 150
            G F ++   +              + +G+   L        +     +      G+I +
Sbjct: 121 QGDFYLSPLNNGTVMLVTAEGYPVANVAGQAITLPDTVQKFAVRDGGVLEASYPNGDIIR 180

Query: 151 KGKVI-----ATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS---GVTVKRGFLEDS 202
               +       +  +      G                     +    + ++ G LE S
Sbjct: 181 TNLAVTEFQKPQLMEHVAGSYMGLPNNLAELGYTQAEVLTELVGANRQQIGMQSGTLEMS 240

Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           N N   EM ++I   + +      +   ++ +   I  I 
Sbjct: 241 NVNLSKEMTELIQTQRSYQFNARAVTLADQMLG-LINGIR 279


>gi|312962296|ref|ZP_07776787.1| flagellar basal-body rod protein F [Pseudomonas fluorescens WH6]
 gi|311283223|gb|EFQ61813.1| flagellar basal-body rod protein F [Pseudomonas fluorescens WH6]
          Length = 246

 Score =  113 bits (282), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 47/243 (19%), Positives = 93/243 (38%), Gaps = 6/243 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + +             A+N++N  T GF+    +   +   +  D     +F  
Sbjct: 1   MDKYLYVAMTGASQNALAQKAHANNLANISTNGFQRDLEQARSM--PVFGDSFPARAFAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119
           + +       G+ I TG +LD A+ GD W A+++P G     R     V   G L + +G
Sbjct: 59  TERPATDFSPGAMIETGRDLDVAVNGDGWMAVQTPDGGEAYVRSASMNVDALGVLRAGNG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN---SG 176
              + +   + +   QK E+   G     +          +  + + Q  ++  N    G
Sbjct: 119 MPIMGNGGPIAVPPQQKIEVGADGTISIRAMGEGPRVMAEVDRIKLVQPDLKNMNKGLDG 178

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                   P    + V +  GFL+ SN N++ EM  ++ L+++F     +++  ++    
Sbjct: 179 TIHTKDGKPAVADASVKLTSGFLQASNVNAVEEMTAVLALSKQFELHIKMMNSAKEDDQA 238

Query: 237 AIR 239
             R
Sbjct: 239 MTR 241


>gi|229591870|ref|YP_002873989.1| flagellar basal body rod protein FlgF [Pseudomonas fluorescens
           SBW25]
 gi|229363736|emb|CAY51141.1| flagellar basal-body rod protein [Pseudomonas fluorescens SBW25]
          Length = 246

 Score =  113 bits (282), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 46/243 (18%), Positives = 94/243 (38%), Gaps = 6/243 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + +             A+N++N  T GF+    +   +   +  D     +F  
Sbjct: 1   MDKYLYVAMTGASQNALAQKAHANNLANISTNGFQRDLEQARSM--PVFGDSFPARAFAL 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           + +       G+ I TG +LD A+ G+ W A+++P       R     V   G L + +G
Sbjct: 59  TERPGTDFSPGAMIETGRDLDVAVSGNGWMAVQTPDGSEAYVRSASMNVDALGVLRAGNG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN---SG 176
              + +   + +   QK E+   G     +          +  + + Q  ++  N    G
Sbjct: 119 MPIMGNGGPIAVPPQQKIEVGADGTISIRAMGEGPRVMAEVDRIKLVQPDLKNMNKGLDG 178

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                   P +  + VT+  GFL+ SN N++ EM  ++ L+++F     +++  ++    
Sbjct: 179 TIHTKDGQPAQADATVTLTSGFLQASNVNAVEEMTAVLALSKQFELHIKMMNSAKEDDQA 238

Query: 237 AIR 239
             R
Sbjct: 239 MTR 241


>gi|149202207|ref|ZP_01879180.1| flagellar proximal rod protein FlgF [Roseovarius sp. TM1035]
 gi|149144305|gb|EDM32336.1| flagellar proximal rod protein FlgF [Roseovarius sp. TM1035]
          Length = 253

 Score =  113 bits (282), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 84/254 (33%), Gaps = 15/254 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIK-----VKFSEVVGAIKNDIDQK 55
           M       L A           A N++N    G+R        V+F +++      +  +
Sbjct: 1   MDRMIYTALNALGVNRDSQVAQAQNLANQTVPGYRRDLPNEGGVRFLDMM----EGLTTR 56

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSL 114
              V +G    S+E G    T  ELD A+    +F +        L+R G  +   DG+L
Sbjct: 57  AFQVETGPAGFSQETGRLTRTDEELDVAIADRGFFYVMPESGDPALSRRGDLRRDTDGTL 116

Query: 115 VSASGKYPVLDMASV-----PIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169
            + +G   +    +         I   D      +  +  +   V+A +    +      
Sbjct: 117 RNGAGDAMLGADMAPLQVPAYRNIRITDIGEIYIQPLDDPEGDPVLAGVLATVIPPEDVA 176

Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           + +   G    +            V +G LE SN N + E+   + + + F     ++  
Sbjct: 177 LTKGADGQIRTVEGVLPPPNQQAEVLQGTLESSNVNPVEELLSTMQMQRNFELGMRMVLT 236

Query: 230 NEKSMLEAIRNIAS 243
             +      R + +
Sbjct: 237 ARELDESGARTMQA 250


>gi|238758109|ref|ZP_04619289.1| Flagellar basal-body rod protein flgF [Yersinia aldovae ATCC 35236]
 gi|238703647|gb|EEP96184.1| Flagellar basal-body rod protein flgF [Yersinia aldovae ATCC 35236]
          Length = 251

 Score =  113 bits (282), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 45/252 (17%), Positives = 90/252 (35%), Gaps = 13/252 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A     ++ +  A+N++N  T GFR        +   I        + VA
Sbjct: 1   MDHAIYTAMGAARQSLEKQAVTANNLANVATPGFRAQLTAMRAI--PIDGPSLMTRTMVA 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +    ++   G+   +G  LD AL+ D + A++ P      TR+G  +++ +G + +  G
Sbjct: 59  ASTPGVNISQGTMNYSGRPLDVALQQDGYLAVQLPDGTEAYTRNGNIQISSNGQM-TVQG 117

Query: 120 KYPVLDM---ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
              + D       P           +           +     +  V  + G V   + G
Sbjct: 118 YPLMGDNGPIEVPPQAAVTIAADGTISALNAGDSPNTIAQLGQIKRVKATAGEVMHGDDG 177

Query: 177 IS------PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
           +              L +   + +  G LE SN  ++  M  MI   + F     +I   
Sbjct: 178 LFHLTPATQQARGAQLANDPLIKIMPGVLEGSNVKAVEAMTDMIANARSFEMQMKVIHSV 237

Query: 231 EKSMLEAIRNIA 242
           +++   A + +A
Sbjct: 238 DENEQRANQLLA 249


>gi|307131608|ref|YP_003883624.1| flagellar basal-body rod protein flgF [Dickeya dadantii 3937]
 gi|306529137|gb|ADM99067.1| Flagellar basal-body rod protein flgF [Dickeya dadantii 3937]
          Length = 251

 Score =  113 bits (282), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 52/254 (20%), Positives = 96/254 (37%), Gaps = 17/254 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A     ++ +  + NM+N  T GFR        V   I+   ++  + V 
Sbjct: 1   MDHAIYTAMGAASQTLEQQAVTSHNMANASTPGFRAQLSAMRAV--PIQGVTNETRTLVI 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           S    +    GS   TG  +D AL  D W A+ S       TR+G  ++  +G  ++  G
Sbjct: 59  SSTPGVDTTPGSMDYTGRSMDVALSQDGWLAVRSADGSEAYTRNGNMEINANG-QLTIQG 117

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG-----------KVIATMGLYSVDMSQG 168
              + D   + +    +  I   G    ++              K++   G        G
Sbjct: 118 NLVMGDGGPIDVPPQTQLTIGPDGTINALNPSDAANTVTQIGRLKLVKATGTEVTRGDDG 177

Query: 169 FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228
             R   +  +       L++ + V V  G LE SN N++  M +MI  +++F     +I 
Sbjct: 178 LFRVSPA--AQQQRGAALQNDATVRVMPGVLEGSNVNTVESMVEMISNSRRFEMQMKVIS 235

Query: 229 ENEKSMLEAIRNIA 242
             + +   A + +A
Sbjct: 236 NVDDNTQRANQILA 249


>gi|123442783|ref|YP_001006760.1| flagellar basal body rod protein FlgF [Yersinia enterocolitica
           subsp. enterocolitica 8081]
 gi|122089744|emb|CAL12597.1| flagellar basal-body rod protein FlgF [Yersinia enterocolitica
           subsp. enterocolitica 8081]
          Length = 251

 Score =  113 bits (282), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 47/252 (18%), Positives = 87/252 (34%), Gaps = 13/252 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A     +  +  A+N++N  T GFR+       V   I        + V 
Sbjct: 1   MDHAIYTAMGAARQSLELQAVTANNLANASTPGFRSQLAAMRAV--PIDGPSMATRTMVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +    +    GS   +G  LD AL+ D + A+  P      TR+G  +++ DG + +  G
Sbjct: 59  ASTPGVDISQGSMNYSGRPLDVALQQDGYLAVRLPDGTEAYTRNGNIQISADGQM-TVQG 117

Query: 120 KYPVLDM---ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
              + D       P           +           +     +  V  + G V   + G
Sbjct: 118 YPLMGDNGPIEVPPQAAVTIAADGTISALNAGDSPNTIAQLGQIKRVRATAGEVMHGDDG 177

Query: 177 IS------PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
           +              L +   + +  G LE SN  ++  M  MI   + F     +I   
Sbjct: 178 LFHLTPETQQARGAQLANDPLIKIMPGVLEGSNVKAVEAMADMIANARSFEMQMKVIHSV 237

Query: 231 EKSMLEAIRNIA 242
           +++   A + +A
Sbjct: 238 DENEQRANQLLA 249


>gi|322832565|ref|YP_004212592.1| flagellar basal-body rod protein FlgF [Rahnella sp. Y9602]
 gi|321167766|gb|ADW73465.1| flagellar basal-body rod protein FlgF [Rahnella sp. Y9602]
          Length = 251

 Score =  113 bits (282), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 53/252 (21%), Positives = 91/252 (36%), Gaps = 15/252 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +      A      + S  + N++N +T GFR+  +    V   +  +  Q  + V 
Sbjct: 1   MDHAIYTAGGAASQTLVQQSVTSSNLANANTPGFRSQLLAMRAV--PVDGESLQTRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G    TG  LD AL+ D + A++ P      TR+G  +V+    L     
Sbjct: 59  ASTPGADMTQGKLNYTGRPLDVALQQDGFLAVQMPDGSEAYTRNGDMQVSPTNQL--TVQ 116

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
            +PV+         P      +      + + G    TMG       V  +   V R + 
Sbjct: 117 GHPVMGDNGPIEVPPNSQLTVSADGTIAVLEAGADPNTMGQLGKLKLVKAANNEVTRGDD 176

Query: 176 GISPNIP------PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           G+    P         L+    + V  G LE SNA+ +  M  MI   ++F     +I  
Sbjct: 177 GMFRPTPATVQARGAALQPDPTIHVMPGTLEGSNADPVSTMVDMIANARRFEMQMKVIHS 236

Query: 230 NEKSMLEAIRNI 241
            +++   A   +
Sbjct: 237 VDENEQSANNLL 248


>gi|283833629|ref|ZP_06353370.1| flagellar basal-body rod protein FlgF [Citrobacter youngae ATCC
           29220]
 gi|291071312|gb|EFE09421.1| flagellar basal-body rod protein FlgF [Citrobacter youngae ATCC
           29220]
          Length = 251

 Score =  113 bits (281), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 48/252 (19%), Positives = 82/252 (32%), Gaps = 16/252 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   ++       + V 
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G    T   LD AL+ D W A+++       TR+G  +V+  G L     
Sbjct: 59  ASTPGADMTPGQMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGAIQVSPTGEL--TIQ 116

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
            +PV+  A         +              G    T+        V  +   V+R + 
Sbjct: 117 GHPVIGEAGPIAVPEGSEVTIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176

Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           G+              L+    + V  G LE SN   +  M  MI   ++F     +I  
Sbjct: 177 GMFRLSAAAQATRGPTLQADPSIRVMSGVLEGSNVKPVAAMSDMIANARRFEMQMKIISS 236

Query: 230 NEKSMLEAIRNI 241
            + +   A   +
Sbjct: 237 VDDNAGRA-NQL 247


>gi|332161323|ref|YP_004297900.1| flagellar basal body rod protein FlgF [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|318605243|emb|CBY26741.1| flagellar basal-body rod protein FlgF [Yersinia enterocolitica
           subsp. palearctica Y11]
 gi|325665553|gb|ADZ42197.1| flagellar basal body rod protein FlgF [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|330860605|emb|CBX70902.1| flagellar basal-body rod protein flgF [Yersinia enterocolitica
           W22703]
          Length = 251

 Score =  113 bits (281), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 87/252 (34%), Gaps = 13/252 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A     +  +  A+N++N  T GFR+       V   I        + V 
Sbjct: 1   MDHAIYTAMGAARQSLELQAVTANNLANASTPGFRSQLAAMRAV--PIDGPSMATRTMVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +    +    G+   +G  LD AL+ D + A+  P      TR+G  +++ DG + +  G
Sbjct: 59  ASTPGVDISQGTMNYSGRPLDVALQQDGYLAVRLPDGTEAYTRNGNIQISADGQM-TVQG 117

Query: 120 KYPVLDM---ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
              + D       P           +           +     +  V  + G V   + G
Sbjct: 118 YPLMGDNGPIEVPPQAAVTIAADGTISALNAGDSPNTIAQLGQIKRVRATAGEVMHGDDG 177

Query: 177 IS------PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
           +              L +   + +  G LE SN  ++  M  MI   + F     +I   
Sbjct: 178 LFHLTPETQQARGAQLANDPLIKIMPGVLEGSNVKAVEAMADMIANARGFEMQMKVIHSV 237

Query: 231 EKSMLEAIRNIA 242
           +++   A + +A
Sbjct: 238 DENEQRANQLLA 249


>gi|291558217|emb|CBL35334.1| fagellar hook-basal body proteins [Eubacterium siraeum V10Sc8a]
          Length = 235

 Score =  113 bits (281), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 39/236 (16%), Positives = 92/236 (38%), Gaps = 10/236 (4%)

Query: 12  QLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDIDQKISFVASGKEYLSK 68
            L  ++ L  +++N++N +T G++  ++    F E +  + N       FV +  +    
Sbjct: 1   MLNHQRSLDAISNNLTNINTAGYKKDEIRMNTFQEELILVSNRRKTSGKFVQTYVDTSKS 60

Query: 69  E--VGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASGKYPVLD 125
                SF  T +  D  ++G+ +F ++   G +  TR G+F++  +G L        +  
Sbjct: 61  NLEQSSFEFTESPFDIGIQGNVYFNIQGTNGNVYQTRCGQFELDGEGYLCLNDSGRVL-- 118

Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185
                 +I   ++ F V  +G I  +   +      S       V +  + +        
Sbjct: 119 --GQSGEIYIGNDDFIVDNEGNILNENGEVIEKLRLSYIPENADVTKVGNNLFSYDGDMT 176

Query: 186 LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           + +     + +G  E SN ++  E+  ++   + F + + ++   +     A   I
Sbjct: 177 IPEDEKYDIIQGCFEKSNVDANKEITSLMETQRLFEASSAVLKYMDTINGRAASEI 232


>gi|294084417|ref|YP_003551175.1| flagellar proximal rod protein FlgF [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292663990|gb|ADE39091.1| flagellar proximal rod protein FlgF [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 251

 Score =  113 bits (281), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 42/239 (17%), Positives = 72/239 (30%), Gaps = 6/239 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIK--VKFSEVVGAIKNDIDQKISF 58
           M       +     +    S  A NMSN    G+R              + N    +   
Sbjct: 1   MDKFIFTAMNTVNNIYDNRSVRAQNMSNISVPGYRRDLGTKSAGSAFLNVMNGFQSRAFA 60

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSAS 118
           +           G    T   +D A+ G+ +F ++    + LTR G   V  DG LV+ S
Sbjct: 61  LKDNNNIFESAPGQLSQTNEAMDIAIRGEGYFVVKGQGDVSLTRRGDLSVGADGFLVNGS 120

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM----GLYSVDMSQGFVRREN 174
               +    +       +   F+   +  I   G    T      L         +++  
Sbjct: 121 KAKLLDAELNPIQVPANRSITFSENGEIIIEPVGAEAGTRVNIGQLAMTSAVDVQLKKFP 180

Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
            G          E      V +  +E SN N   E+   I   +++     LI   ++ 
Sbjct: 181 DGEIRAANGEVPEIDQKPRVIQHNVELSNVNITEELVNSIEDQRQYEINIKLISTAQEL 239


>gi|251789169|ref|YP_003003890.1| flagellar basal body rod protein [Dickeya zeae Ech1591]
 gi|247537790|gb|ACT06411.1| flagellar basal body rod protein [Dickeya zeae Ech1591]
          Length = 251

 Score =  113 bits (281), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 52/252 (20%), Positives = 91/252 (36%), Gaps = 13/252 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A     ++ +  + NM+N  T GFR        V   I+   ++  + V 
Sbjct: 1   MDHAIYTAMGAASQTLEQQAVTSHNMANASTPGFRAQLAAMRAV--PIQGVTNETRTLVI 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           S    +    GS   TG  +D AL  D W A+ +       TR+G  ++  +G  ++  G
Sbjct: 59  SSTPGVDTTPGSMDYTGRSMDVALSQDGWLAVRAADGSEAYTRNGNMEINSNG-QLAVQG 117

Query: 120 KYPVLDM---ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           +  + D       P           +           V     L  V  +   V R + G
Sbjct: 118 RLVMGDGGPIEVPPQTQLTIGPDGTINALNPSDAANTVTQIGRLKLVKATANEVTRGDDG 177

Query: 177 ISPNIPPTPLEDLS------GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
                P    +  +       V V  G LE SN N++  M +MI  +++F     +I   
Sbjct: 178 FFRVSPAAQQQRGAVLQNDATVRVMPGVLEGSNVNTVESMVEMISNSRRFEMQMKVISNV 237

Query: 231 EKSMLEAIRNIA 242
           + +   A + +A
Sbjct: 238 DDNTQRANQILA 249


>gi|327441420|dbj|BAK17785.1| flagellar basal body rod protein [Solibacillus silvestris StLB046]
          Length = 279

 Score =  112 bits (280), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 48/280 (17%), Positives = 92/280 (32%), Gaps = 39/280 (13%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--------- 51
           M  +          L+ +L T++ N++N++T GF+  +  F+E++    N+         
Sbjct: 1   MLRTMVSATNTLSQLQHQLDTISTNIANSNTTGFKAQQANFTEMLYQQFNNDELDRTVRD 60

Query: 52  ---IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL------ESPRGIILTR 102
                +       G    ++  GS   T  +LDFAL  +  +        E       TR
Sbjct: 61  TPVGIRYGVGAQIGLIQSNQSQGSLQVTNRDLDFALTTENQYFNVLMQNPEGDVRTAYTR 120

Query: 103 DGRFK------------VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ 150
           +G F              +D   +  A+G+            +     +    E G   +
Sbjct: 121 NGSFYVTQNEPGILSLVNSDGYQVADANGQPITFPDNVTGFTMDSDGSLVASYENGTPLK 180

Query: 151 KGKVIATMGLYSV------DMSQGFVRRENSGISPNIPPTPLEDLS--GVTVKRGFLEDS 202
               I+ +   +V          G     ++              +   V V++G LE S
Sbjct: 181 FQLGISELQKPNVMEKLQGGTYIGLPENLDALGFTQAQVLTDLQGANRQVGVQKGALEMS 240

Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           N +   EM  +I   + +   T  I   ++ +   I  I 
Sbjct: 241 NVDVSKEMTNLIQAQRSYQFNTRAITIADQMLG-LINGIR 279


>gi|237731008|ref|ZP_04561489.1| flagellar basal body rod protein FlgF [Citrobacter sp. 30_2]
 gi|226906547|gb|EEH92465.1| flagellar basal body rod protein FlgF [Citrobacter sp. 30_2]
          Length = 251

 Score =  112 bits (280), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 84/251 (33%), Gaps = 14/251 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   ++       + V 
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G    T   LD AL+ D W A+++       TR+G  +V+  G  ++  G
Sbjct: 59  ASTPGADMTPGQMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGAIQVSPTG-ELTIQG 117

Query: 120 KYPVL--DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF-VRRENSG 176
              +      +VP                        +A +G   +  + G  V+R + G
Sbjct: 118 HPVIGEAGPIAVPEGSEVTIAADGTISALNPGDPANTVAPVGRLKLVKATGLEVQRGDDG 177

Query: 177 ISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
           +              L+    + V  G LE SN   +  M  MI   ++F     +I   
Sbjct: 178 MFRLTQAAQATRGATLQADPSIRVMSGVLEGSNVKPVAAMSDMIANARRFEMQMKIISSV 237

Query: 231 EKSMLEAIRNI 241
           + +   A   +
Sbjct: 238 DDNAGRA-NQL 247


>gi|313673204|ref|YP_004051315.1| fagellar hook-basal body protein [Calditerrivibrio nitroreducens
           DSM 19672]
 gi|312939960|gb|ADR19152.1| fagellar hook-basal body protein [Calditerrivibrio nitroreducens
           DSM 19672]
          Length = 206

 Score =  112 bits (280), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 43/242 (17%), Positives = 85/242 (35%), Gaps = 36/242 (14%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       L+A  A  ++    A+N++N  +  F+       E               V 
Sbjct: 1   MIPGLFYALSAISAGNKKYGVTANNIANISSTAFKGKIAHLKEF----------SKGGVE 50

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
                 ++ +G FI+TG  LD A+ GD +F        + +R G   +  +G +V  SG+
Sbjct: 51  LYSVTSNEGIGYFINTGRPLDLAINGDGYFKFTDGNKEVYSRMGILSIDKNGEMVDVSGR 110

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
                     I +    +  ++  KG +   G+V   + +Y+ +                
Sbjct: 111 RV-------GINVGTSPDNVHIDNKGNVYVDGEVKGKLQIYNQNG--------------- 148

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
                +   S   +  GFLE SN +   EM + I   +   +    +   ++ +   +  
Sbjct: 149 ----GVVPDSNYEILSGFLEASNVDIAKEMVESITNFRYIQANVKTVKTVDEMLGNIVNI 204

Query: 241 IA 242
           + 
Sbjct: 205 VG 206


>gi|167750706|ref|ZP_02422833.1| hypothetical protein EUBSIR_01684 [Eubacterium siraeum DSM 15702]
 gi|167656385|gb|EDS00515.1| hypothetical protein EUBSIR_01684 [Eubacterium siraeum DSM 15702]
          Length = 235

 Score =  112 bits (280), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 39/236 (16%), Positives = 92/236 (38%), Gaps = 10/236 (4%)

Query: 12  QLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDIDQKISFVASGKEYLSK 68
            L  ++ L  +++N++N +T G++  ++    F E +  + N       FV +  +    
Sbjct: 1   MLNHQRSLDAISNNLTNINTAGYKKDEIRMNTFQEELILVSNRRKTSGKFVQTYVDTSKS 60

Query: 69  E--VGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASGKYPVLD 125
                SF  T +  D  ++G+ +F ++   G +  TR G+F++  +G L        +  
Sbjct: 61  NLEQSSFEFTESPFDIGIQGNVYFNIQGTNGNVYQTRCGQFELDGEGYLCLNDSGRVL-- 118

Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185
                 +I   ++ F V  +G I  +   +      S       V +  + +        
Sbjct: 119 --GQNGEIYIGNDDFIVDNEGNILNENGEVIERLRLSYIPENADVTKVGNNLFSYDGNMT 176

Query: 186 LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           + +     + +G  E SN ++  E+  ++   + F + + ++   +     A   I
Sbjct: 177 IPEGEKYDIIQGCFEKSNVDANKEITSLMETQRLFEASSAVLKYMDTINGRAASEI 232


>gi|169826609|ref|YP_001696767.1| flagellar hook-basal body complex protein [Lysinibacillus
           sphaericus C3-41]
 gi|168991097|gb|ACA38637.1| Flagellar hook-basal body complex protein [Lysinibacillus
           sphaericus C3-41]
          Length = 279

 Score =  112 bits (280), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 42/281 (14%), Positives = 93/281 (33%), Gaps = 41/281 (14%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--------- 51
           M  +          L+ +L T+++N++N+ T GF+  +  F+E++    N+         
Sbjct: 1   MLRTMMTATNTMGQLQNKLDTISNNIANSSTTGFKAKEATFNELLYQQFNNDKLDRAERQ 60

Query: 52  ---IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF------ALESPRGIILTR 102
                +  S    G+   +++ GS  +T  +LD A      +        E+    + TR
Sbjct: 61  TPVGIRFGSGAMLGQIKSNQKQGSLQTTNRDLDLAFTKAKQYFNILMPNGENGTETVYTR 120

Query: 103 DGRFKVTDDGSLV------------SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ 150
            G F ++   +              +A+G+   L        +     +      G+I +
Sbjct: 121 QGDFYLSPLNNGTVMLVTAEGYPVANAAGQAITLPDNVQGFSVRNGGILEASYPNGDIIR 180

Query: 151 KGKVIATMGLYS---------VDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLED 201
               +                V +            +  +      +   + ++ G LE 
Sbjct: 181 TDLAVTEFQKPQLMEHVSGSYVGLPDNLAE-LGFTQAEVLTELVGANRQQIGMQGGTLEM 239

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           SN N   EM ++I   + +      +   ++ +   I  I 
Sbjct: 240 SNVNLSKEMTELIQTQRSYQFNARTVTLADQMLG-LINGIR 279


>gi|163794151|ref|ZP_02188124.1| hypothetical protein BAL199_02019 [alpha proteobacterium BAL199]
 gi|159180765|gb|EDP65284.1| hypothetical protein BAL199_02019 [alpha proteobacterium BAL199]
          Length = 240

 Score =  112 bits (280), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 62/242 (25%), Positives = 108/242 (44%), Gaps = 6/242 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     I L+ Q AL +++S VA+N++N +T  F+   + +     A K    Q + FV 
Sbjct: 1   MDNPVYIALSRQTALRRQMSVVANNVANANTTAFKREVMIYQT--YAQKAPFTQTMDFVI 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
                  +  G+   T    D  + G  +F ++   G   TR+G F +     LV+  G 
Sbjct: 59  DQGTATDQHQGNLKVTHNTFDMGINGPGYFQVDDGSGTKYTRNGTFTLDQQNRLVTQDGN 118

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
            P+LD    PI IP       V + G I    ++I  +G+     ++   +  +S    +
Sbjct: 119 -PILDTQGNPILIPSGGSDLTVSKDGVIRLGDQLIGRLGIVEFADNRILQKVRDSLFETD 177

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
             P P ++     V +G +E SN N++ EM  MI + + + +  TL+D  +K     I+ 
Sbjct: 178 QVPEPAQESE---VMQGMIETSNVNAITEMTSMIDVHRAYEAAKTLLDREDKRQDTIIQR 234

Query: 241 IA 242
           +A
Sbjct: 235 LA 236


>gi|317047692|ref|YP_004115340.1| flagellar basal-body rod protein FlgF [Pantoea sp. At-9b]
 gi|316949309|gb|ADU68784.1| flagellar basal-body rod protein FlgF [Pantoea sp. At-9b]
          Length = 252

 Score =  112 bits (280), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 48/251 (19%), Positives = 89/251 (35%), Gaps = 14/251 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A     ++ S  A N++N  T GFR     +  V   +        + V 
Sbjct: 1   MDHAIYTAMGAASQTLEQQSVTASNLANASTPGFRAQLEAYRAV--PVNGWSLPTRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G+  +TG  LD A+  D W A+ +       TR+G  +++  G +++  G
Sbjct: 59  ASTPGADMSAGAMDNTGRALDVAVGQDGWLAVRTADGSEAYTRNGNIQISSTG-ILTIQG 117

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV----DMSQGFVRRENS 175
              + D   + +    +  I   G     +      AT+ +  +       Q   R ++ 
Sbjct: 118 NPVMGDGGPIAVPQGAELTIAADGSITSRNPGDAPNATVQIGRLKLVKATGQELQRSDDG 177

Query: 176 GISPNIP-----PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
              P           L     V V  G LE SN   +  M  MI   ++F     +I   
Sbjct: 178 MFRPTAQTQATRGAALAQDVNVQVSPGVLEGSNVKPVETMVDMIANARRFEMQMKVISNV 237

Query: 231 EKSMLEAIRNI 241
           +++  +A   +
Sbjct: 238 DENEQKA-NQL 247


>gi|149189837|ref|ZP_01868117.1| putative flagellar basal-body rod protein [Vibrio shilonii AK1]
 gi|148836323|gb|EDL53280.1| putative flagellar basal-body rod protein [Vibrio shilonii AK1]
          Length = 243

 Score =  112 bits (279), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 38/242 (15%), Positives = 91/242 (37%), Gaps = 4/242 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M +           + +     ++N+SN DT GFR    +   +   ++       + V 
Sbjct: 1   MDSLLFTATTGASRVLKAQHVRSNNLSNADTAGFRADMERVKSI--PLQGSGFDGRTMVV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +       + G  + TG  LD A+ G+ + ++++P      TR G  KV + G++     
Sbjct: 59  TNSAATRFDAGDVVKTGRALDIAIMGEGYISVQTPTGNEAYTRAGNIKVDELGAMSINGF 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                +   V  +  + +              G  +    L  V      +++E+  +  
Sbjct: 119 AVVGDNGPMVLPEFQKVEISERGRVSVIPPGGGAEVEVGTLKLVKPDMNQLQKESDSLLH 178

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           ++   P      V +    +E SN +++ E+  ++ LT+ F     ++    +++ ++  
Sbjct: 179 SLDGQPFAADPTVNLAPEHIEGSNVSAIDELLSVMSLTRNFEMQIRMMKTA-ETLAQSGN 237

Query: 240 NI 241
            +
Sbjct: 238 KL 239


>gi|319650827|ref|ZP_08004964.1| FlhP protein [Bacillus sp. 2_A_57_CT2]
 gi|317397425|gb|EFV78126.1| FlhP protein [Bacillus sp. 2_A_57_CT2]
          Length = 275

 Score =  112 bits (279), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 44/276 (15%), Positives = 97/276 (35%), Gaps = 35/276 (12%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +          L++++  V+ N++N DT G++  +  F++++    N+         
Sbjct: 1   MNRTMITATNTLAQLQKQMDIVSHNVANIDTAGYKRREANFTDLLFQQFNNQRNPNAETA 60

Query: 54  -------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-----ILT 101
                  ++       +  +  + G+  +T   LD A   +  +     +         T
Sbjct: 61  RLTPAGIRQGVGAKLAQSQIVMKQGALKATERPLDLAFTKEGQYFRVLEQTEEGAAVRFT 120

Query: 102 RDGRFKVTDDGSLVS---ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI----SQKGKV 154
           R G F +T      +        PVLD  +  I I  + + F V E G      +     
Sbjct: 121 RTGAFYLTPVSDNETMLVTGDGLPVLDENNNSIIINGQAKNFKVTETGSFLAETANGSIQ 180

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPL--------EDLSGVTVKRGFLEDSNANS 206
              +G+  ++  Q   ++ ++ +                      + + +G LE SN + 
Sbjct: 181 EFNLGVVLINKPQFLEQKGDNLLGLPDGVDGEGIYTELNGALRGQIGMAQGSLEQSNVDM 240

Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
             EM  +I+L + +   +  +   ++ M   I  I 
Sbjct: 241 SKEMTDLINLQRAYQFQSRSVSMADQMMG-LINGIR 275


>gi|308186394|ref|YP_003930525.1| Flagellar basal-body rod protein flgF [Pantoea vagans C9-1]
 gi|308056904|gb|ADO09076.1| Flagellar basal-body rod protein flgF [Pantoea vagans C9-1]
          Length = 251

 Score =  112 bits (279), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 48/251 (19%), Positives = 89/251 (35%), Gaps = 14/251 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   +        + VA
Sbjct: 1   MDHAIYTAMGAASQTLDQQAVTASNLANASTPGFRAQLNALRAV--PVSGWSLPTRTLVA 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G+   T   LD A++ D W A+ +       TR+G  +++  G  ++  G
Sbjct: 59  ASTPGADMSQGAMDYTERPLDVAVQQDGWLAVRTADGSEAYTRNGNMQISPTG-TLTVQG 117

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV----DMSQGFVRRENS 175
              + D   + I    +  I   G    ++      AT+ L  +       Q   R ++ 
Sbjct: 118 NPVMGDGGPIVIPQGTEITIAADGSITGLNAGDSPNATVQLGKLKLVRATGQELQRSDDG 177

Query: 176 GISPNIP-----PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
              P           L+  + + V  G LE SN   +  M  MI   ++F     +I   
Sbjct: 178 MFRPTASTQATRGAALQADATMQVMPGVLEGSNVKPVETMVDMIANARRFEMQMKVITNV 237

Query: 231 EKSMLEAIRNI 241
           +++  +A   +
Sbjct: 238 DENEQKA-NQL 247


>gi|188576757|ref|YP_001913686.1| flagellar basal body rod protein FlgF [Xanthomonas oryzae pv.
           oryzae PXO99A]
 gi|188576949|ref|YP_001913878.1| flagellar basal body rod protein FlgF [Xanthomonas oryzae pv.
           oryzae PXO99A]
 gi|188521209|gb|ACD59154.1| flagellar basal-body rod protein FlgF [Xanthomonas oryzae pv.
           oryzae PXO99A]
 gi|188521401|gb|ACD59346.1| flagellar basal-body rod protein FlgF [Xanthomonas oryzae pv.
           oryzae PXO99A]
          Length = 230

 Score =  112 bits (279), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 51/224 (22%), Positives = 89/224 (39%), Gaps = 10/224 (4%)

Query: 22  VADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELD 81
           ++ N++N DTVGF+            I+              +   +  G    TG  LD
Sbjct: 1   MSHNLANVDTVGFKAALANTEAF--KIQGKGYPSRIDALHVDQGFDRSQGHQKVTGNPLD 58

Query: 82  FALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF 140
            +L+ D W A++SP      TR+G   +T +G LV+A+G   + +  +     P +    
Sbjct: 59  VSLQQDRWLAVQSPDGSEAYTRNGELALTANGQLVTANGHAVLDEGGNPMTIPPHQAMEI 118

Query: 141 NVGEKGEISQKGKVIATMG----LYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT--- 193
                  I  +G+   TM     +  VD     + R   G+  N    P +  +  T   
Sbjct: 119 GSDGSISIIPQGEGPQTMAIVGKMKVVDAPADRLTRRPDGLMRNTSTDPAQAFAVATGKT 178

Query: 194 VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
           +  G LE SN ++   + +MI L ++F     +I   + +   A
Sbjct: 179 INSGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNGDDNAQSA 222


>gi|229542505|ref|ZP_04431565.1| protein of unknown function DUF1078 domain protein [Bacillus
           coagulans 36D1]
 gi|229326925|gb|EEN92600.1| protein of unknown function DUF1078 domain protein [Bacillus
           coagulans 36D1]
          Length = 276

 Score =  111 bits (278), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 45/277 (16%), Positives = 103/277 (37%), Gaps = 35/277 (12%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S          L+ ++ T++ N++N DT G+++ +  F++++    N+         
Sbjct: 1   MNQSMLTATNTLRQLQDKIDTISHNVANVDTNGYKSKQASFTDLLVQQINNQPDTSKETG 60

Query: 54  -------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF-----ALESPRGIILT 101
                  +  +     +  +S   G+   TG  LD A   +  +            +  T
Sbjct: 61  RKTPYGIRTGTGAKLAQAVISPSQGALEHTGRALDMAFTKENQYLKVLARANGSDEVAFT 120

Query: 102 RDGRFKVTDDGS---LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGE----ISQKGKV 154
           R+G  +V+  G+   +++ +   PVLD  +  I        + +   G      S   + 
Sbjct: 121 RNGALEVSPLGNNRSVLTDANGNPVLDEHNAMITFRGNVADYAIRPNGTLQVAYSDGTRE 180

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLE--------DLSGVTVKRGFLEDSNANS 206
              +G+  +   Q   +  N+ +                    S +++++G LE SN + 
Sbjct: 181 SFNLGVVQMRNPQVLEQVGNNLLRLPQNVNAANVYTDLTGATRSQISMQQGVLEKSNVDL 240

Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
             E+ ++    + +   +  I  +++ M   + NI S
Sbjct: 241 STEITELTKTERLYQFQSKTITLSDQMMG-LVNNIRS 276


>gi|255021355|ref|ZP_05293403.1| Flagellar basal-body rod protein flgF [Acidithiobacillus caldus
           ATCC 51756]
 gi|254969218|gb|EET26732.1| Flagellar basal-body rod protein flgF [Acidithiobacillus caldus
           ATCC 51756]
          Length = 246

 Score =  111 bits (278), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 57/246 (23%), Positives = 101/246 (41%), Gaps = 9/246 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M T   I +    A+ +R +  A+N++N +T GFR    +F  +   +         + A
Sbjct: 1   MDT-LYIAMTGAKAILERQTATANNLANANTTGFRAEMAQFRAL--PVYGQGLPTRVYTA 57

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +  E      G  + TG  LD A+ G  W A+++P      TRDG  +V   G LV+A+G
Sbjct: 58  TTGESWDFRSGPIVRTGRALDVAVNGPGWMAVQAPDGKEAYTRDGNLQVNGQGLLVTATG 117

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV----IATMGLYSVDMSQGFVRRENS 175
              +    +     P                 G +    +A   +  V+     +R+ + 
Sbjct: 118 HPVLGVNGTPISLPPMSHLTIGADGVISGIPAGNLPDGLMAINQIKLVNPPANQLRQSSD 177

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
           G+  N+      +   V ++ G LE SN N ++ M QM+  +++F   T L+    +   
Sbjct: 178 GLFVNVDGKAAPEDGKVVLESGALEGSNVNPIHAMVQMLQDSRQFEMQTKLMQTISQ-DR 236

Query: 236 EAIRNI 241
           +A   I
Sbjct: 237 DAANQI 242


>gi|254460576|ref|ZP_05073992.1| flagellar basal body FlaE domain protein [Rhodobacterales bacterium
           HTCC2083]
 gi|206677165|gb|EDZ41652.1| flagellar basal body FlaE domain protein [Rhodobacteraceae
           bacterium HTCC2083]
          Length = 267

 Score =  111 bits (278), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 42/267 (15%), Positives = 86/267 (32%), Gaps = 31/267 (11%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI---DQKISFVA 60
            F   L+        +S V++N++N  T  FR     F+++      +        +   
Sbjct: 1   MFGTILSGMSTSMFEISVVSNNVANAGTTAFRKSNASFADLYNGTSPETVSRTATGTGSI 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-------IILTRDGRFKVTDDGS 113
             +   S + G  +     L+ AL G+  F   +P         +  TRDG F + ++G 
Sbjct: 61  VEQTRQSAKQGGMMERDGVLNMALAGNGMFVTTTPNSDGTPSEVLSFTRDGEFSLDENGV 120

Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNV----------------GEKGEISQKGKVIAT 157
           L S+               + Q    F                        S+  +++  
Sbjct: 121 LRSSKNDIVYGYDGLGGRGMQQLVVPFQNEDGAKLTALEVGSDGEMLATYGSEDPRLVGQ 180

Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQ 212
           + +     +    +   +    +     L           +++ G LE SN +   EM  
Sbjct: 181 IAIALFPNTTAMRQMGMNRFKESRESGELVLGVAGSEGFGSIQTGALESSNVDLTTEMTS 240

Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIR 239
           MI   Q+F+  + ++      + +  R
Sbjct: 241 MIRAQQQFSGSSRILQTYTDMIEKLTR 267


>gi|328958263|ref|YP_004375649.1| flagellar basal-body rod protein FlgG [Carnobacterium sp. 17-4]
 gi|328674587|gb|AEB30633.1| flagellar basal-body rod protein FlgG [Carnobacterium sp. 17-4]
          Length = 240

 Score =  111 bits (278), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 91/242 (37%), Gaps = 18/242 (7%)

Query: 12  QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----------ISFVAS 61
             A++ ++  V+++++N +T G+++  + F+E++    N                    S
Sbjct: 1   MNAIQNQMDAVSNDIANINTTGYKSKNISFNELLLNDLNGEADYLSDTVQDAGINRGSKS 60

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASGK 120
           G    +   GS IS   +   A+ G+ +F +    G    TRDG F V  D S+ + +G 
Sbjct: 61  GVTSTNFTQGSLISDPNDYHLAIAGEGFFGVIGENGERYLTRDGAFHVNGDKSITNDNGD 120

Query: 121 YPVLDMASVPIQIPQKDEI--FNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178
              +       Q P+ D     N            ++ T+ L+    +        +  S
Sbjct: 121 TLEIQTTIPTNQWPEGDVSIAENGEVTIHSENGSTLVGTIPLFHPAQTNALEPVGENKYS 180

Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            N            ++++ +LE SN +    + +M+   + ++    +    ++ M   I
Sbjct: 181 YNGAF----GTGEGSIQQNYLEASNVDLASSITEMMLAQRSYSLNLKVAQGTDE-MASVI 235

Query: 239 RN 240
             
Sbjct: 236 NQ 237


>gi|119503645|ref|ZP_01625728.1| hypothetical protein MGP2080_03860 [marine gamma proteobacterium
           HTCC2080]
 gi|119460707|gb|EAW41799.1| hypothetical protein MGP2080_03860 [marine gamma proteobacterium
           HTCC2080]
          Length = 244

 Score =  111 bits (277), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 52/237 (21%), Positives = 89/237 (37%), Gaps = 8/237 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M    N+   +   ++Q  + V  N++N+ T GF+    +         +      S  +
Sbjct: 1   MSNIANLAAQSAREIQQAQAVVTHNLANSGTTGFKADLYQAQSSYLNAADGTGTAGSNGS 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASG 119
           +         G+   TG +LD A+ GD WF + +  G   L+R G  +V  DG L  A+G
Sbjct: 61  AL----DYSAGAIAQTGRDLDVAITGDGWFQVVANDGTLALSRRGDLRVGTDGILKDATG 116

Query: 120 KYPVL---DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           K  +     ++  P           +           ++A   L  V+     + +   G
Sbjct: 117 KTIMGNAGPVSLPPYSSLSIGTDGTISIVPMGELPTNIVALDRLMLVNPPVEQLVKSADG 176

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           +        LE  + V V  G LE SN + +  M +MI L + F      I   E+ 
Sbjct: 177 MVRVEDMNRLEPDANVRVAVGALETSNVSPVGAMVEMITLARSFEQHIQTIKSAEEL 233


>gi|148980301|ref|ZP_01815988.1| putative flagellar basal-body rod protein [Vibrionales bacterium
           SWAT-3]
 gi|145961320|gb|EDK26630.1| putative flagellar basal-body rod protein [Vibrionales bacterium
           SWAT-3]
          Length = 244

 Score =  111 bits (277), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 43/238 (18%), Positives = 77/238 (32%), Gaps = 5/238 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M                     A+N+S+ DTVGF+ +          ++           
Sbjct: 1   MNPILFSAAKGAERTMLAQHVRANNLSHADTVGFKALME--HSTPMRLEGSGFLTSVTSR 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFA---LESPRGIILTRDGRFKVTDDGSLVSA 117
           +     +   G  I T   LD A+ GD +     +E     + TR G F++  +G L   
Sbjct: 59  TNSSINNFAQGEDIRTERPLDVAINGDGFITLEGVEDEPAELYTRAGNFRLDGNGQLYLG 118

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177
             +    D   V           N             +    L  V      +    SG 
Sbjct: 119 ERRVMSTDGPMVLPDFEFVSVSSNGLVSITPIGGEASLEVGALKLVKPENEQMTMHASGH 178

Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
                   L +   V V+ G+LE SN +S+ E+  ++ LT+++     ++   ++   
Sbjct: 179 FVPKDGQVLAEDFSVQVRSGYLEASNVSSLEELVSIMSLTRQYEMQIEVMASADEIAQ 236


>gi|259908811|ref|YP_002649167.1| flagellar basal body rod protein FlgF [Erwinia pyrifoliae Ep1/96]
 gi|224964433|emb|CAX55942.1| Flagellar basal-body rod protein [Erwinia pyrifoliae Ep1/96]
 gi|283478793|emb|CAY74709.1| Flagellar basal-body rod protein flgF [Erwinia pyrifoliae DSM
           12163]
 gi|310767291|gb|ADP12241.1| flagellar basal body rod protein FlgF [Erwinia sp. Ejp617]
          Length = 251

 Score =  111 bits (277), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 50/251 (19%), Positives = 90/251 (35%), Gaps = 14/251 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   ++       + V 
Sbjct: 1   MDHAIYTAMGAASQTLDQQAVTASNLANASTPGFRAQLNAARAV--PVEGLSLPTRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G+   T   LD A++GD W A+++       TR+G  +V+  G  ++  G
Sbjct: 59  ASTPGADMSQGALDYTERALDVAMQGDGWLAVQNDDGTEAYTRNGNMQVSPTG-QLTVQG 117

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL---YSVDMSQGFVRRENSG 176
           K  + D   + I    +  I   G    ++      AT+ L     V      + R + G
Sbjct: 118 KAVMGDGGPIAIPQGAQITIAADGSITALNPGDAPNATVQLGKLKLVKAVGNELTRGDDG 177

Query: 177 ISPNIPPTPLEDL------SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
           +         +          V V  G LE SN  +   M  MI   ++F     +I   
Sbjct: 178 MFRVSAAAQAQRGATLPLDPTVKVMPGVLEGSNVKATQTMVDMIANARRFEMQMKIISSV 237

Query: 231 EKSMLEAIRNI 241
           +++  +A   +
Sbjct: 238 DENEQKA-NQL 247


>gi|313905135|ref|ZP_07838504.1| fagellar hook-basal body protein [Eubacterium cellulosolvens 6]
 gi|313470038|gb|EFR65371.1| fagellar hook-basal body protein [Eubacterium cellulosolvens 6]
          Length = 336

 Score =  111 bits (277), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 37/333 (11%), Positives = 94/333 (28%), Gaps = 94/333 (28%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  + +  ++   + + +L  + +N++N +T GF++    F + +               
Sbjct: 1   MLRAMDSAVSGLRSHQNKLDVLGNNIANVNTNGFKSQNYTFKDAMYQTSAASSGGARDAD 60

Query: 49  -----KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII---- 99
                      +  + +      +    S        + ++ G  +F  ++    +    
Sbjct: 61  GTATIGGTNPSQFGYGSVQGAIATDFTSSTPQYVGGFNASINGSGFFITKAANSTVALSG 120

Query: 100 ---------------------LTRDGRFKVTDDGSLVSASGKYPVLDMASVPI------- 131
                                 TR G+F +  +G +V A+  +      + P        
Sbjct: 121 DHTTQANVEADSTILKNANFNYTRVGQFTIDANGYMVDANKNFVYGYQPTNPTTGTANNI 180

Query: 132 ---------------------------------------QIPQKDEIFNVGEKGEISQKG 152
                                                  Q+     I             
Sbjct: 181 SDPTSYDETRLVALRAPAEVSADGNTFSFAGQALQLKSVQVDNDGIIKATINNSNGDAMN 240

Query: 153 KVIATMGLYSVDMSQGFVRRENS------GISPNIPPTPLEDLSGVTVKRGFLEDSNANS 206
            V+  + + +    +G  +  N+      G +  +    +   +  ++  G+LE SN + 
Sbjct: 241 VVLGKVAIAAFQNQEGLAKAGNNTFNTRVGDNTGLLTATVPGGATPSLMGGYLEGSNVDL 300

Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             E   MI   + F +   LI  +++ + E + 
Sbjct: 301 AKEFSDMITTERGFQANAKLITVSDEVLQELVN 333


>gi|89068730|ref|ZP_01156116.1| flagellar basal-body rod protein FlgF [Oceanicola granulosus
           HTCC2516]
 gi|89045693|gb|EAR51755.1| flagellar basal-body rod protein FlgF [Oceanicola granulosus
           HTCC2516]
          Length = 248

 Score =  111 bits (277), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 53/246 (21%), Positives = 100/246 (40%), Gaps = 4/246 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M+ S  I L+    +++ +   A+NM+N +T GF+  ++ F   +       +   +FV 
Sbjct: 1   MENSNYIALSLATVMQRSIDVAANNMANANTAGFKGERILFDSYLSPGDAGEENGATFVL 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASG 119
               ++    G   +TG  LD AL+G  WF+ +         RDGRF V   G+LV+ +G
Sbjct: 61  DRGSFMDDSQGPVRNTGNVLDVALQGPGWFSYQTQDGQQAFGRDGRFAVDAQGNLVTQAG 120

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK-VIATMGLYSVDMSQGFVRRENSGIS 178
              +          P       + + G +S      +  +G++ V   + + R       
Sbjct: 121 ARVLDAGGQPIALPPDAVAELVIADDGTLSSPATGALGRLGVFDVPDLKSYTRIGAGMFV 180

Query: 179 PNIPPT--PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                            V +G LE SN   + EM +M+ + + +   T L+   ++   +
Sbjct: 181 APAEADVAAPLPDLATKVVQGALEGSNVQPIVEMTRMMAIQKSYEQATKLMGTGDELRKD 240

Query: 237 AIRNIA 242
           A+R + 
Sbjct: 241 ALRRLG 246


>gi|320107041|ref|YP_004182631.1| flagellar hook-basal body protein [Terriglobus saanensis SP1PR4]
 gi|319925562|gb|ADV82637.1| flagellar hook-basal body protein [Terriglobus saanensis SP1PR4]
          Length = 249

 Score =  111 bits (276), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 57/246 (23%), Positives = 97/246 (39%), Gaps = 8/246 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND------IDQ 54
           M +         LA  Q L T A+N+SNT+TVGFR  +  F  V+  +          D 
Sbjct: 1   MDSGLYAAYNGLLARTQALDTAANNLSNTNTVGFRAQRDYFRGVLAGMPPGDLESQVGDA 60

Query: 55  KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSL 114
             SF   G   L    G   +TG  LD AL+G  +FA+++  G   TRDG F    DG+L
Sbjct: 61  VNSFGILGGNTLDLSQGEITATGNPLDLALDGSGFFAVQTTHGTRYTRDGGFLRAADGTL 120

Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174
            +  G   +       I    + ++   G    ++ +G  IA                  
Sbjct: 121 ETRRGDGVLDATGKKIIVPSGEVQVGGDGTISVLTAEGSAIAGKLGILNFKGSDLSAEGA 180

Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
           +        TP    S   V+ G LE +N ++++   Q++ + ++   +   ++    ++
Sbjct: 181 NLFVAREGATP--IASEARVQEGSLEGANQDAVHGTMQLLLMQRQAEMMQRAVNLFSNTL 238

Query: 235 LEAIRN 240
            +    
Sbjct: 239 DKTAAE 244


>gi|292487940|ref|YP_003530815.1| flagellar basal-body rod protein FlgF [Erwinia amylovora CFBP1430]
 gi|292899159|ref|YP_003538528.1| flagellar basal-body rod protein FlgF [Erwinia amylovora ATCC
           49946]
 gi|291199007|emb|CBJ46118.1| flagellar basal-body rod protein FlgF (proximal rod protein)
           [Erwinia amylovora ATCC 49946]
 gi|291553362|emb|CBA20407.1| Flagellar basal-body rod protein flgF [Erwinia amylovora CFBP1430]
 gi|312172061|emb|CBX80318.1| Flagellar basal-body rod protein flgF [Erwinia amylovora ATCC
           BAA-2158]
          Length = 251

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 49/251 (19%), Positives = 89/251 (35%), Gaps = 14/251 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   ++       + V 
Sbjct: 1   MDHAIYTAMGAASQTLDQQAVTASNLANASTPGFRAQLNAARAV--PVEGLSLPTRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G+   T   LD A++GD W A+++       TR+G  +V+  G  +S  G
Sbjct: 59  ASTPGADMSQGALDYTERALDVAMQGDGWLAVQTADGSEAYTRNGNMQVSPTG-QLSVQG 117

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL---YSVDMSQGFVRRENSG 176
              + D   + I    +  I   G    ++      AT+ L     V      + R + G
Sbjct: 118 NAVMGDGGPIAIPQGAQITIAADGSITALNPGDAPNATVQLGKLKLVKAVGNELTRGDDG 177

Query: 177 ISPNIPPTPLEDL------SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
           +         +          + V  G LE SN  +   M  MI   ++F     +I   
Sbjct: 178 MFRVSASAQAQRGATLPLDPTMKVMPGVLEGSNVKATQTMVDMIANARRFEMQMKVISSV 237

Query: 231 EKSMLEAIRNI 241
           +++  +A   +
Sbjct: 238 DENEQKA-NQL 247


>gi|254455211|ref|ZP_05068645.1| flagellar basal body FlaE domain protein [Octadecabacter
           antarcticus 238]
 gi|198263495|gb|EDY87768.1| flagellar basal body FlaE domain protein [Octadecabacter
           antarcticus 238]
          Length = 267

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 42/267 (15%), Positives = 85/267 (31%), Gaps = 31/267 (11%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI---DQKISFVA 60
            F   L+        +S V++N++N  T  FR     FS++      +            
Sbjct: 1   MFGTILSGMSTSMFEISVVSNNVANASTTAFRKSSASFSDLYSGASAETVSRTSTGVGSI 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-------IILTRDGRFKVTDDGS 113
             +   + + G+ +     L+ AL G   F   +P         +  TRDG F + + G 
Sbjct: 61  VEQTRQNTKQGALMERDGVLNMALAGSGMFVTTTPNSDGTLSEALNFTRDGEFALDESGV 120

Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEIS----------------QKGKVIAT 157
           L S++              + +    F      +++                Q  KV   
Sbjct: 121 LRSSTNDIVYGFDGIGGTTLQKIVIPFVNETDTKLTSIEVGSDGLIEATYGEQGPKVAGQ 180

Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQ 212
           + + +   +    +        +                 +V+ G LE SN N   E+  
Sbjct: 181 LAVATFANASSLQQLGLGSFQASQASGAPSFGIAGSEGFGSVQVGKLEASNVNLTTELTS 240

Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIR 239
           +I   Q+F+  + ++      + +  R
Sbjct: 241 LIRAQQQFSGSSRILQAYSDMIEKLTR 267


>gi|15022422|dbj|BAB62243.1| flagellar protein [Treponema medium]
          Length = 280

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 58/142 (40%), Gaps = 12/142 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S   G++     + R+  + +N++N +T GF+  +V F +++    +   +      
Sbjct: 1   MMRSLFSGVSGMQNHQTRMDVIGNNIANVNTTGFKRGRVNFQDLISQQLSGASRPNEEVG 60

Query: 56  -------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                     V           G+  STG   D A++G+ +F L+S      TR G F V
Sbjct: 61  GVNPKEVGLGVMVASIDTVHTQGALQSTGINTDIAVQGNGFFVLKSGEKSFYTRAGAFGV 120

Query: 109 TDDGSLVSASGKYPVLDMASVP 130
             DG++V+ +    V    +  
Sbjct: 121 DKDGTMVNPANGMRVQGWMAQE 142


>gi|188534169|ref|YP_001907966.1| flagellar basal body rod protein FlgF [Erwinia tasmaniensis Et1/99]
 gi|188029211|emb|CAO97083.1| Flagellar basal-body rod protein [Erwinia tasmaniensis Et1/99]
          Length = 251

 Score =  110 bits (274), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 50/251 (19%), Positives = 93/251 (37%), Gaps = 14/251 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   ++       + V 
Sbjct: 1   MDHAIYTAMGAASQTLDQQAVTASNLANASTPGFRAQLNAARAV--PVEGLSLPTRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119
           +         G+   T   LD A++GD W A+++       TR+G  +V+  G  ++  G
Sbjct: 59  ASTPGADMTQGALDYTERPLDVAMQGDGWLAVQTANGTEAYTRNGNMQVSPTG-QLTVQG 117

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ---GFVRRENSG 176
              + D  ++ I    +  I   G    ++      AT+ L  + + Q     + R + G
Sbjct: 118 NAVMGDGGAIAIPQGSEITIAADGSITALNPGDPPNATVQLGRLKLVQARGNELTRGDDG 177

Query: 177 ISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
           +              LE    + V  G LE SN  +   M  MI   ++F     +I   
Sbjct: 178 MFRVSASTQAQRGATLEADPAMKVMPGVLEGSNVKATQTMVDMIANARRFEMQMKVISSV 237

Query: 231 EKSMLEAIRNI 241
           +++  +A   +
Sbjct: 238 DENEQKA-NQL 247


>gi|114566393|ref|YP_753547.1| flagellar hook protein [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|114337328|gb|ABI68176.1| flagellar hook protein [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 475

 Score =  110 bits (274), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 69/215 (32%), Gaps = 22/215 (10%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S   G++     + R+  + +N++N +T G++  +V F + +        +      
Sbjct: 1   MMRSMYSGVSGLRNHQTRMDVIGNNIANINTAGYKKSRVVFQDTLYQTMRGATRPDSSGS 60

Query: 56  ---------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106
                       ++              +T   LD  ++GD +F +   +    TR G F
Sbjct: 61  RGGTNPMGIGLGMSVSSIDQIHTGAPTTATNKLLDMGIDGDGYFMIRHGQQKYFTRAGNF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           ++   G+LV  +  Y V    +    +  +  +    E   +   G +            
Sbjct: 121 ELDTKGNLVHTANGYYVQGWVTKIDPVTGQWNLDCSREVETVDISGLLAC--------DP 172

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLED 201
           Q       SG      P    D    ++  G  E 
Sbjct: 173 QATKEMSFSGNLDAEIPFKQVDPEDESIYPGTQES 207



 Score = 85.7 bits (210), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 19/133 (14%), Positives = 44/133 (33%), Gaps = 9/133 (6%)

Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171
           G+ V+   +      +     +     I    + GE       +A + L       G  +
Sbjct: 344 GNSVTEIAQNGYGMGSLSSYTVGIDGVIRGSYDNGETRD----LARVALARFQNPAGLTQ 399

Query: 172 RENSGISPNIPP-----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
              +    ++       +P  +     +    LE SN +   E   MI   + F + + +
Sbjct: 400 LGGTMFQKSVNSGEAVVSPPTESGMGKIVPSSLEMSNVDLSEEFTDMIVTQRGFQANSRI 459

Query: 227 IDENEKSMLEAIR 239
           I  +++ + E + 
Sbjct: 460 ITTSDEMIQELVN 472


>gi|257871308|ref|ZP_05650961.1| flagellar basal-body rod protein flgG [Enterococcus gallinarum EG2]
 gi|257805472|gb|EEV34294.1| flagellar basal-body rod protein flgG [Enterococcus gallinarum EG2]
          Length = 260

 Score =  110 bits (274), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 40/245 (16%), Positives = 83/245 (33%), Gaps = 16/245 (6%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA---------IKNDIDQK 55
             I  +    L+  L T A+N++N +T G++     F  ++             N     
Sbjct: 7   LGISRSGLNHLQTNLDTTANNIANVNTNGYQAQTTHFQALMENAIGAEETLFNGNTAQYG 66

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSL 114
            S  A      S   G+   T   LD A++G+ +F +    G  +L+R G F ++++  L
Sbjct: 67  ASMGAKATTTTSFAQGNLAGTAQPLDLAIQGNGFFGVRDQTGQLLLSRAGNFHLSENKQL 126

Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174
           V++ G    +       Q P   +I         +++      +G  ++           
Sbjct: 127 VNSEGYPVAMTTNVPTPQWPDAQQIAIDASGQLTTEENGQTRVLGQLTLYQPTNTENITP 186

Query: 175 SGISPNIPPT------PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228
            G                   +  +V +G L  S  +    M  ++   + +   T  + 
Sbjct: 187 VGNQLYSAGDQALLTSQTNPAAFGSVLQGQLVQSTVDLATSMTDLLTTQRAYGLNTKAMQ 246

Query: 229 ENEKS 233
             ++ 
Sbjct: 247 TADEM 251


>gi|312962294|ref|ZP_07776785.1| flagellar basal-body rod protein FlgG [Pseudomonas fluorescens WH6]
 gi|311283221|gb|EFQ61811.1| flagellar basal-body rod protein FlgG [Pseudomonas fluorescens WH6]
          Length = 207

 Score =  110 bits (274), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 39/197 (19%), Positives = 72/197 (36%), Gaps = 15/197 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  +      A +  L+T+++N++N  T GF+  + +F +++  IK           
Sbjct: 1   MLPALWVAKTGLSAQDTNLTTISNNLANVSTTGFKRDRAEFQDLLYQIKKQPGAQSTQDS 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                 Q  + V       +   G+   TG  LD A+ G  +F +  P G    TRDG F
Sbjct: 61  ELPSGLQLGTGVQIVGTQKNFSAGNLQQTGQPLDMAINGRGFFQILQPDGTTSYTRDGTF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
            +  +G +V+A+G      +      +         V      +   +VI  +       
Sbjct: 121 HLDSNGQIVTANGFSLEPAVIVPADAKTFTVGNDGTVSITVAGNPASQVIGNLQTADFIN 180

Query: 166 SQGFVRRENSGISPNIP 182
             G     N+     +P
Sbjct: 181 PAGLQAMGNNLFRKPLP 197


>gi|68164545|gb|AAY87274.1| predicted flagellar proximal rod protein [uncultured bacterium
           BAC17H8]
          Length = 251

 Score =  110 bits (274), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 39/239 (16%), Positives = 77/239 (32%), Gaps = 6/239 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIK--VKFSEVVGAIKNDIDQKISF 58
           M             +    S  A N++N    G+R                + +  +   
Sbjct: 1   MDKLIYTAFNTVNNIYDNRSVRAQNLANIAVPGYRRDLGAKSVGTAFLENFDTLQSRAMA 60

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSAS 118
           V     Y S ++G+   TG + D A+ GD +F ++      L+R G  +V  +G L + +
Sbjct: 61  VQDDTNYFSTQLGTLSETGADTDIAIRGDGYFIVQGLGEPSLSRRGDLRVNAEGILENGT 120

Query: 119 GKYPV----LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174
            +  +      +     ++ +  E  ++  +   S  G       L         + +  
Sbjct: 121 SQKMLDAALQPIQVPAHRVIKVSEDGDIIIEPLGSDPGTEQLVARLAMTLAEGRELNKFA 180

Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
            G       T     + + V    LE SN N   E+   I   + +     +I    + 
Sbjct: 181 DGEIRLEDGTVPPVSADMRVVAKHLELSNVNVTEELINSIEDQRAYEINVKMIASASEL 239


>gi|320179223|gb|EFW54181.1| Flagellar basal-body rod protein FlgF [Shigella boydii ATCC 9905]
          Length = 251

 Score =  110 bits (274), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 48/252 (19%), Positives = 81/252 (32%), Gaps = 16/252 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N    GFR        V   ++       + V 
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASMPGFRAQLNALRAV--PVEGLSLPTRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G    T   LD AL+ D W A+++       TR+G  +V   G L     
Sbjct: 59  ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
            + V+  A         +              G    T+        V  +   V+R + 
Sbjct: 117 GHQVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176

Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           GI              L+    + V  G LE SN N++  M  MI   ++F     +I  
Sbjct: 177 GIFRLSAETQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236

Query: 230 NEKSMLEAIRNI 241
            + +   A   +
Sbjct: 237 VDDNAGRA-NQL 247


>gi|192290239|ref|YP_001990844.1| hypothetical protein Rpal_1843 [Rhodopseudomonas palustris TIE-1]
 gi|192283988|gb|ACF00369.1| protein of unknown function DUF1078 domain protein
           [Rhodopseudomonas palustris TIE-1]
          Length = 273

 Score =  110 bits (274), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 43/271 (15%), Positives = 83/271 (30%), Gaps = 41/271 (15%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +         A       ++ N++N  T  F+     FS+++        Q    V    
Sbjct: 6   ALWTATTGLQAQSAAFENISGNVANAQTTAFKATNTAFSDLIYP-----PQVSDTVLWRS 60

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPR-------------GIILTRDGRFKVTD 110
              + + GS          A+ G+ +F +E+P                  TR G F +  
Sbjct: 61  VLTNGQQGSISYDPVSTHMAIGGEGYFTVEAPSGVSASGQPTFSTSETTYTRRGDFDL-K 119

Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV---------------- 154
           +G LV+ +G Y +                        +   G +                
Sbjct: 120 NGYLVNGAGYYLMGSQIDPVTGAVGSTGPLQFDTSTALPDLGVLQSLSVSSSGKLQGTYS 179

Query: 155 ------IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMY 208
                 +A++ + S        +      SP     P   ++  TV    LE SN +   
Sbjct: 180 KGQTVDVASLSIASFAGQGFMKQGSGGTFSPTPQSGPALYVNAGTVVGSALEASNVDIAD 239

Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +M  M+   Q +++ T ++  + + ML    
Sbjct: 240 QMTTMVQAQQAYSACTRVVTASNEMMLTMTS 270


>gi|227873523|ref|ZP_03991768.1| possible flagellar basal body rod protein [Oribacterium sinus
           F0268]
 gi|227840613|gb|EEJ50998.1| possible flagellar basal body rod protein [Oribacterium sinus
           F0268]
          Length = 263

 Score =  110 bits (274), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 47/263 (17%), Positives = 98/263 (37%), Gaps = 22/263 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------Q 54
           M  SF +G     A ++++  +++N++N +   F+     FS+++    ND        Q
Sbjct: 1   MNMSFYVGALGADASQKKMGVISNNLANINNTAFKPKNAIFSDLINYNLNDSPEAKTDLQ 60

Query: 55  KISFVASGKEYLSKEVGSFISTGTELDFALEG-DAWFALESPR--GIILTRDGRFK---V 108
             +  A  +        +F +TG   D+A+   +A+F L+ P    I  TR+G F    +
Sbjct: 61  AEAGTAVVRTNTEYSPAAFHTTGQPNDYAIGNANAFFKLQDPSSGEITYTRNGHFHAGEM 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNV-------GEKGEISQKGKVIATMGLY 161
            D    +       VLD     +                        +   +V   +G+Y
Sbjct: 121 PDGKFYLFTESGKHVLDENGKKMLADDTALKAIEAAGQTGGNTANANNATEEVKQKIGVY 180

Query: 162 SVDMSQGFVRRENS--GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
           +++     V + ++   I P         +    ++ G LE S  +   EM ++I   + 
Sbjct: 181 TINYPSRLVNKGDNELAIRPGDQNNKDSVIQNPILESGTLESSGTDMAKEMTRLIESQRA 240

Query: 220 FNSITTLIDENEKSMLEAIRNIA 242
           F     ++  +++     I  + 
Sbjct: 241 FTYALKMVQTSDEV-EGTINQLR 262


>gi|15616299|ref|NP_244604.1| flagellar hook-basal body protein [Bacillus halodurans C-125]
 gi|10176361|dbj|BAB07456.1| flagellar hook-basal body protein [Bacillus halodurans C-125]
          Length = 280

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 52/280 (18%), Positives = 93/280 (33%), Gaps = 39/280 (13%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50
           M  S          L+++L T++ N++N++T G++  +  FS+++    N          
Sbjct: 1   MNLSMISASVTMGELQKKLDTLSHNIANSNTTGYKRREASFSDLLFQQVNTNKATQYETG 60

Query: 51  ----DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-----PRGIILT 101
               +  +  S     +  L  E G+  +T   LDFA+   + F              LT
Sbjct: 61  RLTPNGIRVGSGAKVSQTALRMEQGTLTTTDRALDFAIANPSSFFEIETVVDGNPVTRLT 120

Query: 102 RDGRFK-----VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK--- 153
           RDG F        D+   +       +LD A   I IP   E   + ++G +        
Sbjct: 121 RDGAFYLTANPNNDNLLQLVTQNGDYLLDSAGNRINIPATFEEITLTDQGTLQVTMPNGA 180

Query: 154 --VIATMGLYSVDMSQGFVRRENSGI---------SPNIPPTPLEDLSGVTVKRGFLEDS 202
               A + L  V   Q       +                        G  V +G LE S
Sbjct: 181 NVQAAQLQLIQVMKPQLLEAVGGNMFQLPDLAALGFAENEVYAAVGAGGGAVVQGTLEGS 240

Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           N +   EM  +I   + +      +   ++ M   +  + 
Sbjct: 241 NVDIGREMTDLIETQRNYQFNARSVSMADQMMG-LVNGLR 279


>gi|149183417|ref|ZP_01861850.1| FlhP [Bacillus sp. SG-1]
 gi|148848862|gb|EDL63079.1| FlhP [Bacillus sp. SG-1]
          Length = 278

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 44/279 (15%), Positives = 93/279 (33%), Gaps = 38/279 (13%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +          L++++  +  N++N+DT G++  +  FSE++    +++        
Sbjct: 1   MNRTMIGATNTLNQLQKQMDIIGHNLANSDTNGYKRREAMFSELLFQQVSNLKGEKDANT 60

Query: 54  -------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF-----ALESPRGIILT 101
                  ++       +  ++   G+  +TG  LDFAL     F       E    +  T
Sbjct: 61  RLTPGGIRQGVGAKLAQSEINLAQGALKATGRSLDFALTSRNQFFKVLVQGEDGADVRYT 120

Query: 102 RDGRFKVTDDG----SLVSASGKYPVLDMASVPIQIPQKDEIF--------NVGEKGEIS 149
           RDG F     G     LV+  G   + +  +       +             +   G   
Sbjct: 121 RDGAFYANPIGNGEMMLVNGQGHAVLDENDNFITFTEAEMNSQDISLGDSGQLTIGGTPF 180

Query: 150 QKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVK------RGFLEDSN 203
             G V      +   + Q  +   +      +    +       ++      +  LE SN
Sbjct: 181 NLGIVSVEKPQFMQQVGQNLLGLPDDLQGFGVNENEILTSLEGALRDNIGLAQSTLEGSN 240

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            +   EM  M+++ + +   +  I   ++ M   I  I 
Sbjct: 241 VDIGKEMTDMLNVQRAYQFQSRSISMADQMMG-LINGIR 278


>gi|257871307|ref|ZP_05650960.1| flagellar hook-basal body complex protein [Enterococcus gallinarum
           EG2]
 gi|257805471|gb|EEV34293.1| flagellar hook-basal body complex protein [Enterococcus gallinarum
           EG2]
          Length = 233

 Score =  109 bits (273), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 40/256 (15%), Positives = 90/256 (35%), Gaps = 39/256 (15%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV-------------GA 47
           M    ++       L++R  T + N++N +T G++  K  F   +               
Sbjct: 1   MIRGLDVLSRNISLLQKRQETTSGNIANVNTTGYQA-KALFQSALDEVALHNYQSGPNAD 59

Query: 48  IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
            + DI             +S++ G+   TG   DFAL  + +F +++  G    TR+G F
Sbjct: 60  TRRDIGGLSLGTQLAGSTISQDQGAVKQTGQASDFALLSEGYFVVQNNAGQRLYTRNGDF 119

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
            V      V+  G   +         +   +                             
Sbjct: 120 TVNQQNQYVTQEGYLVLGANGQAVSALGPANFQIQSFP---------------------P 158

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
           +       + ++ N       +++   +++G LE +N +   EM  MI  +++F +   +
Sbjct: 159 EALTTDGQNYVTSNAAG---TNVNAPVIQQGALEQANVSVADEMVAMIQTSREFEANQKV 215

Query: 227 IDENEKSMLEAIRNIA 242
           +    +++ +A+  + 
Sbjct: 216 LSSTNQTLQKAVNELG 231


>gi|311280016|ref|YP_003942247.1| fagellar hook-basal body protein [Enterobacter cloacae SCF1]
 gi|308749211|gb|ADO48963.1| fagellar hook-basal body protein [Enterobacter cloacae SCF1]
          Length = 251

 Score =  109 bits (272), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 81/252 (32%), Gaps = 16/252 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    +          +  A N++NT T GFR        V   +        + VA
Sbjct: 1   MDHAIYTAMGGASQTLDMQAVTASNLANTSTPGFRAQLTALRAV--PVVGQSVPTRTLVA 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
                     G    T   LD AL+ D W A+++       TR+G  +VT  G L     
Sbjct: 59  GSTPGADMTPGQLDYTARPLDVALQQDGWLAVQTADGSEGYTRNGNIQVTPTGQL--TIQ 116

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175
             PV+  A         +              G    T+        V  +   V R + 
Sbjct: 117 GNPVIGEAGPIAVPEGSEVTIASDGTVSALNPGDPANTIAPVGRLKMVKATNTEVARGDD 176

Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           G+              L+    V ++ G LE SN  ++  M  MI   ++F     +I  
Sbjct: 177 GMFRLTAAAQATRGPVLQADQSVRLQSGVLEGSNVKAVAAMADMISSARRFEMQMKVISS 236

Query: 230 NEKSMLEAIRNI 241
            + +  +A   +
Sbjct: 237 VDTNEQKA-NQL 247


>gi|225159023|ref|ZP_03725333.1| protein of unknown function DUF1078 [Opitutaceae bacterium TAV2]
 gi|224802402|gb|EEG20664.1| protein of unknown function DUF1078 [Opitutaceae bacterium TAV2]
          Length = 261

 Score =  109 bits (272), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 46/251 (18%), Positives = 95/251 (37%), Gaps = 16/251 (6%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK------NDIDQKISF 58
               ++A     + L  + +N++N +T G+++    +S+            +   Q  + 
Sbjct: 7   LTSSVSALSNFTEGLEVIGNNIANVNTTGYKSSSASYSDSFSNTLRAATSVDSSRQTGTG 66

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG--IILTRDGRFKVTDDGSLVS 116
           V       +   GS  +TG   D A+ G+ +F ++ P      +TRDG FK  D+G LV+
Sbjct: 67  VQLAGISTNYTQGSISTTGVSTDLAISGEGYFIVQDPNSGAQYITRDGSFKFDDNGYLVN 126

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ-----KGKVIATMGLYSVDMSQGFVR 171
           ASG   +   ++         +  ++   G +S          +AT+GL  V      ++
Sbjct: 127 ASGLRVLDSASAPIQIPTTGVQSKSISSNGAVSYVDTAGVTHTVATVGLAQVADQAKLMK 186

Query: 172 RENSGI---SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228
              +     +  +             K   LE S  +   E+  MI +   F +   ++ 
Sbjct: 187 EGGNLYDYSATTVAIGIPGSNGTGAFKTYSLELSKVDLTAELPNMITMQGSFQANARMVT 246

Query: 229 ENEKSMLEAIR 239
            ++    + + 
Sbjct: 247 VSDTIFDDIVN 257


>gi|88704305|ref|ZP_01102019.1| flagellar basal-body rod protein FlgF [Congregibacter litoralis
           KT71]
 gi|88701356|gb|EAQ98461.1| flagellar basal-body rod protein FlgF [Congregibacter litoralis
           KT71]
          Length = 251

 Score =  109 bits (272), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 52/241 (21%), Positives = 93/241 (38%), Gaps = 10/241 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     I  A         +  A N++N  TVGF+   V+   V   ++    +  ++  
Sbjct: 1   MDHFVYIAAAGAKESMLAQAANAHNLANASTVGFKADLVEAETVY--LRGAGQETRAYNV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-----PRGIILTRDGRFKVTDDGSLV 115
                   E G    TG +LD A+ G+ WFA+++       G  +TR G F++ + G LV
Sbjct: 59  IQGTGTDFEQGVIEQTGRDLDLAINGEGWFAVQALTGEGNGGEGVTRRGDFRIDEFGQLV 118

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ---KGKVIATMGLYSVDMSQGFVRR 172
           + +G+  + +   + +       I + G    +        V     +  V+ +   + +
Sbjct: 119 NGAGQALLGNDGPIALPPFSSLSIGSDGTVSIVPLGELPNAVAVLDRIKMVNPASEDLSK 178

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
              G        P      V +  G LE SN N +  M +MI L+++F     L+   E 
Sbjct: 179 GEDGFFRTDSDLPTPADGNVRLVSGALESSNVNPVTAMVRMIELSRQFEHYVKLMKTAED 238

Query: 233 S 233
            
Sbjct: 239 V 239


>gi|39934722|ref|NP_946998.1| flagellar basal-body rod protein FlgG [Rhodopseudomonas palustris
           CGA009]
 gi|39648572|emb|CAE27093.1| possible flagellar basal-body rod protein FlgG [Rhodopseudomonas
           palustris CGA009]
          Length = 273

 Score =  109 bits (272), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 43/271 (15%), Positives = 84/271 (30%), Gaps = 41/271 (15%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +         A       ++ N++N  T  F+     FS+++        Q    V    
Sbjct: 6   ALWTATTGLQAQSAAFENISGNVANAQTTAFKATNTAFSDLIYP-----PQVSDTVLWRS 60

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPR-------------GIILTRDGRFKVTD 110
              + + GS          A+ G+ +F +E+P                  TR G F++  
Sbjct: 61  VLTNGQQGSISYDPVSTHMAIGGEGYFTVEAPSGVSASGQPTFSTSETTYTRRGDFEL-K 119

Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV---------------- 154
           +G LV+ +G Y +                        +   G +                
Sbjct: 120 NGYLVNGAGYYLMGAQIDPVTGAVGSTGPLQFDTSTALPDLGVLQSLSVSSSGKLQGTYS 179

Query: 155 ------IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMY 208
                 +A++ + S        +      SP     P   ++  TV    LE SN +   
Sbjct: 180 KGQTVDVASLSIASFAGQGFMKQGSGGTFSPTPQSGPALFVNAGTVVGSALEASNVDIAD 239

Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +M  M+   Q +++ T ++  + + ML    
Sbjct: 240 QMTTMVQAQQAYSACTRVVIASNEMMLTMTS 270


>gi|88858142|ref|ZP_01132784.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Pseudoalteromonas tunicata D2]
 gi|88819759|gb|EAR29572.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Pseudoalteromonas tunicata D2]
          Length = 255

 Score =  109 bits (271), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 92/249 (36%), Gaps = 15/249 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     I ++        ++  A+N++N  TVGF++   +   +      +      F  
Sbjct: 1   MDKLLYISMSGAKQNLLGVAVNANNLANAKTVGFKSDFEQARSM--QAFGEGLPTRVFAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119
             +      +G+  +TG  LD A+ G  W    +       TR G  ++T  G L++A G
Sbjct: 59  EERPGSKMAMGALSTTGRNLDVAVSGGGWLVVQDQNGEEAFTRGGNLQITSTGQLLTAKG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS-----VDMSQGFVRREN 174
           +  + +   + + +P +    +     ++  +G   + +         V  +Q  + +  
Sbjct: 119 EAVIGEGGPIILPVPLEKVQISTDGTIQVRPQGAPASFLEDVERLKVVVPQNQNLLEKGL 178

Query: 175 SGISPNIPPTPL-------EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
            G+      +         +    V V  G LE SN N + EM  MI   ++F     ++
Sbjct: 179 DGLFRPKDKSTFKDQCDFCDTNLEVQVISGALEMSNVNPVDEMVGMIAHQRQFELQVKMM 238

Query: 228 DENEKSMLE 236
              EK    
Sbjct: 239 KTAEKMDES 247


>gi|299822258|ref|ZP_07054144.1| flagellar basal body rod protein FlgG [Listeria grayi DSM 20601]
 gi|299815787|gb|EFI83025.1| flagellar basal body rod protein FlgG [Listeria grayi DSM 20601]
          Length = 259

 Score =  109 bits (271), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 42/251 (16%), Positives = 89/251 (35%), Gaps = 16/251 (6%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV--------VGAIKNDID 53
                IG A  +   + L   ++N++N++T GF+  ++    +               I 
Sbjct: 1   MKGLYIGAAGMMNYMKHLDVHSNNIANSETAGFKFDQLTSQAMSRKQVQFNQADSAKTIG 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALE------GDAWFALESPRGIILTRDGRFK 107
                V   + +++ + GS   TG +LDF L       G ++F         LTR G F 
Sbjct: 61  SVDYAVHPNQTFVNLKQGSMQVTGRDLDFFLHDADSEAGSSFFVAGKDGETFLTRGGSFY 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
              +G L ++ G   + +  +      Q     +       +   +++  +    +   Q
Sbjct: 121 SDQNGFLKTSDGANLLAENGTAIQVGAQTKITVDTAGNIRRADTNELLGKLQTKFIAADQ 180

Query: 168 -GFVRRENSGISPNIPPT-PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225
            G + +   G       T          ++ G LE SN +   EM +++   +   + + 
Sbjct: 181 RGNLEKNGLGQLTLKTGTIQGLPAGRALIQNGVLESSNVDMSTEMVELMDNQRMVQASSN 240

Query: 226 LIDENEKSMLE 236
           +I   +    +
Sbjct: 241 IIKMFDTVYDK 251


>gi|213421404|ref|ZP_03354470.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Typhi str. E01-6750]
          Length = 197

 Score =  108 bits (270), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 63/197 (31%), Gaps = 15/197 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M +S  I      A +  +  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           G+   T    D A++G  +F +  P G    TRDG F
Sbjct: 61  TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGTSAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V  +G LV+A G      +      +         V    +       +  + L +   
Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMN 180

Query: 166 SQGFVRRENSGISPNIP 182
             G      +       
Sbjct: 181 DTGLESIGENLYIETQS 197


>gi|291617021|ref|YP_003519763.1| FlgF [Pantoea ananatis LMG 20103]
 gi|291152051|gb|ADD76635.1| FlgF [Pantoea ananatis LMG 20103]
          Length = 252

 Score =  108 bits (269), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 87/251 (34%), Gaps = 14/251 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   +        + V 
Sbjct: 1   MDHAIYTAMGAASQTLDQQAVTASNLANASTPGFRAQLNALRAV--PVNGWSLPTRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G+   T   LD A++ D W A+ +       TR+G  ++  DG  ++  G
Sbjct: 59  ASTPGADMSQGAMDYTERPLDVAMQQDGWLAVRTADGSEAYTRNGNMQIRSDG-TLTVQG 117

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG----FVRRENS 175
              + +   + I    +  I   G    ++      AT+ L  + + Q       R ++ 
Sbjct: 118 NPVMGEGGPIVIPQGSEITIAADGSITGLNAGDSPNATVQLGRLKLVQATGKELQRGDDG 177

Query: 176 GISPNIP-----PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
              P           L+    + V  G LE SN   +  M  MI   ++F     +I   
Sbjct: 178 MFRPTAATQATRGAALQADPTMQVMPGVLEGSNVKPVETMVDMIANARRFEMQMKVISNV 237

Query: 231 EKSMLEAIRNI 241
            ++  +A   +
Sbjct: 238 NENEQKA-NQL 247


>gi|297617147|ref|YP_003702306.1| fagellar hook-basal body protein [Syntrophothermus lipocalidus DSM
           12680]
 gi|297144984|gb|ADI01741.1| fagellar hook-basal body protein [Syntrophothermus lipocalidus DSM
           12680]
          Length = 487

 Score =  108 bits (269), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 53/136 (38%), Gaps = 12/136 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S   G++     + R+  + +N++N +TVG++  +  F +                 
Sbjct: 1   MMRSMYAGVSGLRTHQLRMDVIGNNIANVNTVGYKKSRAIFKDAFYQAIRGGSAPTGARG 60

Query: 56  -------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                     V      +    GS  +TG   D A++G+ +F LES      TR G F  
Sbjct: 61  GTNPQAIGLGVQLSSVDVIATPGSAQTTGKNTDLAIDGNGYFILESGGERYYTRAGAFDF 120

Query: 109 TDDGSLVSASGKYPVL 124
              G+ V++ G + + 
Sbjct: 121 DVLGNYVASGGLHVMG 136



 Score = 89.2 bits (219), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 17/129 (13%), Positives = 41/129 (31%), Gaps = 5/129 (3%)

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
           + +G     D  +         +   V      +     +A + L       G + +  +
Sbjct: 356 TFTGWAEYQDGYTKGDLRSITIDQNGVILGVYSNGITDNLARVALAVFQNPAGLLAKGGN 415

Query: 176 GISPNIPPTPLEDLS-----GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
               +      +  +        +  G LE SN +   E   MI   + F + + +I  +
Sbjct: 416 LFQVSNNSGDPKVGAPGEEAMGAILPGSLEMSNVDLSEEFTDMIVTQRGFQANSRIITTS 475

Query: 231 EKSMLEAIR 239
           ++ + E + 
Sbjct: 476 DEMLQELVN 484


>gi|317133480|ref|YP_004092794.1| flagellar hook-basal body protein [Ethanoligenens harbinense
           YUAN-3]
 gi|315471459|gb|ADU28063.1| flagellar hook-basal body protein [Ethanoligenens harbinense
           YUAN-3]
          Length = 326

 Score =  108 bits (269), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 42/322 (13%), Positives = 86/322 (26%), Gaps = 84/322 (26%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI------DQK 55
             + N  +    A +  +  + +N++N +T GF+  +  FS++               Q 
Sbjct: 1   MRALNSAVTGLQAQQTAMDVIGNNIANVNTDGFKASRTDFSDLFYQTLQGGTDNTNATQV 60

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI----------------I 99
              V               +T    +  + G+ +F + +                     
Sbjct: 61  GYGVKVSGVSKDMSTTGETTTNVPTNLFINGEGYFIVSTDSASHTAGSTTNSSGATVADY 120

Query: 100 LTRDGRFKVTDDGSLVSASGKYPVLDMAS-------------VPIQIPQKDEIFNVGEKG 146
            TR G F+    G LV A+G Y +   A+                 I      F+    G
Sbjct: 121 YTRVGNFQKNASGYLVDANGNYVMGMDATSLAAYQADPTSLPTLHAISLIGATFHPTAAG 180

Query: 147 EISQKGKVIATMGLY-------------SVDMSQGFVRRENSGISPNIPPTPLEDLSGVT 193
             +     +                   ++  S G      S  +     +    ++  T
Sbjct: 181 TSTSSDVTVTANTNISDLTINSDGTISGTIGSSTGTFEYGTSNGATTASASDPIIVALAT 240

Query: 194 ------------------VKRG---FLEDSN---------------ANSMYEMGQMIHLT 217
                             V  G   +++ SN                +   E   MI   
Sbjct: 241 FPNDGGLSQAGNTSFTQSVSSGSPTYIQASNGNSTTLISGALEQSNVDLAREFTNMIVTQ 300

Query: 218 QKFNSITTLIDENEKSMLEAIR 239
           + F + + +I   +  + E + 
Sbjct: 301 RGFQANSRVITVADSLLEEIVN 322


>gi|226327743|ref|ZP_03803261.1| hypothetical protein PROPEN_01616 [Proteus penneri ATCC 35198]
 gi|225203447|gb|EEG85801.1| hypothetical protein PROPEN_01616 [Proteus penneri ATCC 35198]
          Length = 153

 Score =  108 bits (269), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 30/136 (22%), Positives = 53/136 (38%), Gaps = 14/136 (10%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S  I      A +  +  +++N++N  T GF+  +  F +++               
Sbjct: 1   MIRSLWIAKTGLDAQQTNMDVISNNLANVSTNGFKRQRAVFEDLLYQTIRQPGAMTSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
                 Q  + V           G+   T    D A++G  +F ++ P G    TRDG F
Sbjct: 61  NAPSGLQIGTGVRPVATERLHSQGNLAQTNGTRDVAIKGQGFFHVQLPDGTDAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYP 122
           ++  +G LV+ SG   
Sbjct: 121 QMDQNGQLVTTSGFQV 136


>gi|327393472|dbj|BAK10894.1| flagellar basal-body rod protein FlgF [Pantoea ananatis AJ13355]
          Length = 252

 Score =  108 bits (268), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 87/251 (34%), Gaps = 14/251 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   +        + V 
Sbjct: 1   MDHAIYTAMGAASQTLDQQAVTASNLANASTPGFRAQLNALRAV--PVNGWSLPTRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G+   T   LD A++ D W A+ +       TR+G  ++  DG  ++  G
Sbjct: 59  ASTPGADMSQGAMDYTERPLDVAMQQDGWLAVRTADGSEAYTRNGNMQIRSDG-TLTVQG 117

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG----FVRRENS 175
              + +   + I    +  I   G    ++      AT+ L  + + Q       R ++ 
Sbjct: 118 NPVMGEGGPIVIPQGSEITIAADGSITGLNAGDSPNATVQLGRLKLVQATGKELQRGDDG 177

Query: 176 GISPNIP-----PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
              P           L+    + V  G LE SN   +  M  MI   ++F     +I   
Sbjct: 178 MFRPTAATQATRGAALQADPNMQVMPGVLEGSNVKPVETMVDMIANARRFEMQMKVISNV 237

Query: 231 EKSMLEAIRNI 241
            ++  +A   +
Sbjct: 238 NENEQKA-NQL 247


>gi|288554367|ref|YP_003426302.1| flagellar hook-basal body protein [Bacillus pseudofirmus OF4]
 gi|288545527|gb|ADC49410.1| flagellar hook-basal body protein [Bacillus pseudofirmus OF4]
          Length = 281

 Score =  108 bits (268), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 46/281 (16%), Positives = 88/281 (31%), Gaps = 40/281 (14%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS--- 57
           M  S          L++++ T++ NM+N++T GF+  +  FS+++    N+         
Sbjct: 1   MNLSMISASVTMGQLQRKMDTLSHNMANSNTTGFKRREATFSDLLFQQVNNNTDTRYETG 60

Query: 58  -----------FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-----ILT 101
                           +  L  E G+  +T   LDFA+     F              LT
Sbjct: 61  RLTPNGIRVGAGAKIAQTALRMEQGAIQNTDRRLDFAITQPNHFFEVQSVENGQAVNRLT 120

Query: 102 RDGRFKVT-----DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGE--------- 147
           R+G F +           +  +    +LD       +P       +   GE         
Sbjct: 121 REGAFYLNEDPDNPGQLTIVNANGEYLLDGGGNRFTLPMNFSDIQLSPTGELRVTLNDNV 180

Query: 148 ------ISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLED 201
                   Q   V+    L +V  +   +    +    +             + +  LE 
Sbjct: 181 TTEELGQVQLIHVLKPHLLEAVGDTHFTIPNLENLGLMDADMFEQVPGDEGRLMQNALEQ 240

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           SN N   EM +++   + +      +   ++ M   I  I 
Sbjct: 241 SNVNIAQEMNELLQTQRHYQFNARALSMADE-MNGLINGIR 280


>gi|218507129|ref|ZP_03505007.1| flagellar basal body rod protein FlgG [Rhizobium etli Brasil 5]
          Length = 217

 Score =  108 bits (268), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 63/174 (36%), Gaps = 7/174 (4%)

Query: 75  STGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQI 133
            TG +LD AL G  +F ++S     + TR G F   D G LV+  G   +  +       
Sbjct: 43  QTGNDLDVALIGKGFFQIQSTDGTTLYTRAGAFNKNDQGQLVTVDGYEVLPGITIPTGST 102

Query: 134 PQKD-EIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSG- 191
                    V  K   +    V+  + L       G     ++              +  
Sbjct: 103 ELTISRSGEVSVKLPGATDTTVLGQLTLADFVNEAGLQPIGDNLFQETAASGEAVVGNPD 162

Query: 192 ----VTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
                 +K+G+LE SN + + E+ ++I   + +   + +I   ++      +N+
Sbjct: 163 EEGFAYMKQGYLESSNVDPVKEITELISAQRAYEMNSKVITTADEMASIVSKNL 216


>gi|119947176|ref|YP_944856.1| flagellar basal-body rod protein FlgF [Psychromonas ingrahamii 37]
 gi|119865780|gb|ABM05257.1| flagellar basal-body rod protein FlgF [Psychromonas ingrahamii 37]
          Length = 243

 Score =  108 bits (268), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 48/244 (19%), Positives = 83/244 (34%), Gaps = 5/244 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M         +   L       A+NM+  +T+GF+ +      V      D         
Sbjct: 1   MNPILFTAATSASKLMISQHVRANNMAQVNTIGFKAVLE--RTVPVFRTGDGFLSSVTSR 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           S    +    G    TG  LD A+ GD +FA+         TR G  K + DG L   + 
Sbjct: 59  SNSTSIDFSHGKLSQTGRPLDVAITGDGFFAVRGNDGKESYTRAGNIKASADGELSVNNN 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                    + +   Q   I N G    +S  G     +G   +          N+    
Sbjct: 119 ALLGTGGEQLVLPEHQSLTISNKGIITVMSNGGGASIEVGQIKLVNPDTNKLTLNTS-GT 177

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
                PLE    V +   +LE +N + + EM  ++  T+++     ++   ++ +  A  
Sbjct: 178 FSSAVPLEASPDVEMTSEYLESANVSVISEMIGVMTATRQYEMQVKMMKAADQLIA-AGN 236

Query: 240 NIAS 243
            + S
Sbjct: 237 KLIS 240


>gi|331005470|ref|ZP_08328849.1| hypothetical protein IMCC1989_1994 [gamma proteobacterium IMCC1989]
 gi|330420746|gb|EGG95033.1| hypothetical protein IMCC1989_1994 [gamma proteobacterium IMCC1989]
          Length = 245

 Score =  108 bits (268), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 41/248 (16%), Positives = 97/248 (39%), Gaps = 11/248 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV------VGAIKNDIDQ 54
           M  + +I   +     Q+L  ++ N++N  T  ++                 +       
Sbjct: 1   MD-AISISAISMQNDLQKLDQLSHNVANMSTPAYKRTLSATESFTNTVSRFESPNRVAST 59

Query: 55  KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSL 114
             + + +         GS  ST   LD A+EGD +F L +  G   ++ G F + ++G +
Sbjct: 60  IQNAIPTISTSRDFTTGSLSSTSNPLDLAIEGDGFFELTNNTGTFYSKRGNFLIDNNGQV 119

Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174
             +  +  +  ++     I  +D    +   G+I + GK ++ + + + D     +    
Sbjct: 120 KLSGTELLLNGVSGD---IRLQDAEPEINSLGQIFENGKEVSQIRVINFDNPSSLIS-LG 175

Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
            GI      +  +++   ++++ FLE SN+    +M  +I L +   +   +I   +  +
Sbjct: 176 QGIFKVSEASVQKEVELPSIRQSFLEASNSQPAEDMLNLIQLARHIEATQQVIRGYDGML 235

Query: 235 LEAIRNIA 242
                ++ 
Sbjct: 236 ATVFEDLG 243


>gi|257866396|ref|ZP_05646049.1| flagellar hook-basal body complex protein [Enterococcus
           casseliflavus EC30]
 gi|257873088|ref|ZP_05652741.1| flagellar hook-basal body complex protein [Enterococcus
           casseliflavus EC10]
 gi|257800354|gb|EEV29382.1| flagellar hook-basal body complex protein [Enterococcus
           casseliflavus EC30]
 gi|257807252|gb|EEV36074.1| flagellar hook-basal body complex protein [Enterococcus
           casseliflavus EC10]
          Length = 233

 Score =  107 bits (267), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 40/256 (15%), Positives = 88/256 (34%), Gaps = 39/256 (15%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV-------------GA 47
           M    ++       L++R  T + N++N +T G++  K  F   +               
Sbjct: 1   MIRGLDVLSRNISLLQKRQETTSGNIANVNTTGYQA-KTLFQSALDEVALHNYQGGPNAD 59

Query: 48  IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
            + DI             +S++ G+   TG   DFAL  + +F +++  G    TR+G F
Sbjct: 60  TRRDIGGLSLGTQLAGSTISQDQGAVKQTGQASDFALLSEGYFVVQNNAGQRLYTRNGDF 119

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
            V      V+  G   +         +   + +                           
Sbjct: 120 TVNQQNQYVTQEGYLVLGANGQAVSALGPANFLIQTFP---------------------P 158

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
           +       + ++ N        ++   +++G LE +N     EM  MI  +++F +    
Sbjct: 159 EALTTAGQNYVTSNAAG---TTVNAPVIQQGALEQANVAVADEMVAMIQTSREFEANQKA 215

Query: 227 IDENEKSMLEAIRNIA 242
           +    +++ +A+  + 
Sbjct: 216 LSSTNQTLQKAVNELG 231


>gi|315649859|ref|ZP_07902942.1| fagellar hook-basal body protein [Paenibacillus vortex V453]
 gi|315274833|gb|EFU38214.1| fagellar hook-basal body protein [Paenibacillus vortex V453]
          Length = 281

 Score =  107 bits (267), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 47/279 (16%), Positives = 100/279 (35%), Gaps = 49/279 (17%)

Query: 13  LALEQRLSTVADNMSNTDTVGFRT---IKVKFSEVVGAIKND---------IDQKISFVA 60
           +  EQR +TV  N++N +T G++    ++  F EV+ ++            + +  + V 
Sbjct: 1   MTQEQRHNTVTQNIANVNTAGYKATNSVQRSFPEVLVSMIGGNDSSNAGRKLGKFNTGVY 60

Query: 61  SGKEYLSKEVGSFISTGTELDFAL---------------------------------EGD 87
           + +       G+   TG   DFAL                                    
Sbjct: 61  AEESISLYTEGALRETGKNTDFALVSSFTVQNPATGQDYPFDASGRYVDENGEVIYRPEG 120

Query: 88  AWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGE 147
            +   +       TR+G F+V+ +G+L+S SG   + +     I      +     +   
Sbjct: 121 FFTVQDENGDTRYTRNGSFRVSPEGNLLSESGYQVLDNNNRPIILTGSASDFTVNEQGEI 180

Query: 148 ISQKGKVIATM-GLYSVDMSQGFVRRENSGIS---PNIPPTPLEDLSGVTVKRGFLEDSN 203
           +   G     + G+  V    G +R  N       P+     +       V++GF+E SN
Sbjct: 181 MDAAGNGTGIILGVSIVSQPHGLIREGNGVFRMSDPDGEVRFMTPADNGVVRQGFIEGSN 240

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            +    M ++    + + +   ++   ++++ +A+  I 
Sbjct: 241 VDPTQSMVELTAALRAYETNQKIVQYYDRTLEKAVNEIG 279


>gi|192360677|ref|YP_001982399.1| flagellar basal-body rod protein FlgF [Cellvibrio japonicus
           Ueda107]
 gi|190686842|gb|ACE84520.1| flagellar basal-body rod protein FlgF [Cellvibrio japonicus
           Ueda107]
          Length = 295

 Score =  107 bits (267), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 45/236 (19%), Positives = 95/236 (40%), Gaps = 5/236 (2%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
             +  I +          +  A+N++N +T GFR    + S  +G    D     ++  +
Sbjct: 50  DRALFIAMTGAKHNMLAQTNRANNLANLNTTGFRADF-EQSRSMGVYYGDGQPTRAYALT 108

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGK 120
                    G  I+TG ELD A++G  + A+++P      TR G   +   G L +A+G 
Sbjct: 109 ESPSSDFTAGPMITTGNELDVAIQGTGFIAIQAPDGTEAYTRAGNMTIDAAGMLRTANGL 168

Query: 121 YPVLDMASVPIQIPQKDEIF---NVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177
             +     + I   ++  +     +   G       ++    +  V+     + + + G+
Sbjct: 169 PVMGAAGPINIPENERVAVGADGTISMVGLGQGPEAMVEVARIKLVNPDVKNLEKGDDGL 228

Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
                    +    VT++ G LE SN N++ E  Q++ L +++     ++   E++
Sbjct: 229 FRQRDGLNAQPAVDVTLRAGMLEASNVNAVTEFTQIMSLARQYEMQVKVMKAAEEN 284


>gi|117928057|ref|YP_872608.1| hypothetical protein Acel_0849 [Acidothermus cellulolyticus 11B]
 gi|117648520|gb|ABK52622.1| protein of unknown function DUF1078 domain protein [Acidothermus
           cellulolyticus 11B]
          Length = 398

 Score =  107 bits (267), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 45/215 (20%), Positives = 78/215 (36%), Gaps = 23/215 (10%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++   A +  L  V +N++N +TVGF+  +V+F + +  +            
Sbjct: 1   MLRSLFSGVSGLRAHQTMLDVVGNNIANVNTVGFKASQVEFEDTLSQMLRAAGAPQGVQG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                Q    V       +   G   +TG + D  ++GD +F L+     + TR+G F  
Sbjct: 61  GTNPAQVGLGVQIAAISTTFTQGPAETTGVDTDLMIQGDGFFVLDDGGQRVYTRNGAFSF 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
             +G+LVSA+G      +AS  +          V   G ++     + T    S   +  
Sbjct: 121 DANGNLVSANGALVQGWLASGGV----------VNTTGPVTAIKLPLGTSMPPSATTTAT 170

Query: 169 FV-RRENSGISPNIPPTPLEDLSGVTVKRGFLEDS 202
                   G    I        +     +  LE S
Sbjct: 171 LAGNLPADGSGSPIDNNLTVYDAKGQATQYTLEYS 205



 Score = 76.1 bits (185), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 14/94 (14%), Positives = 37/94 (39%), Gaps = 5/94 (5%)

Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNAN 205
             + +A + L + +   G  +   S  + ++     +  +  T     +  G LE SN +
Sbjct: 302 MKQPLAKIALATFNNPGGLTKVGTSEYAESVNSGAAQIGASGTGSRGQLAAGELEGSNVD 361

Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              E   +I   + F +   +I  +++ + + + 
Sbjct: 362 LSQEFTNLIIAERGFQANAKVITTSDQVLQDLVN 395


>gi|4580018|gb|AAD24206.1|AF049342_4 flagellar hook protein FlgE [Treponema denticola ATCC 33520]
          Length = 237

 Score =  107 bits (267), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 55/139 (39%), Gaps = 12/139 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S   G+      + R+  + +N++N +T GF+  +V F +++    +   +      
Sbjct: 1   MMRSLFSGVTGMQNHQTRMDVIGNNVANVNTTGFKRGRVNFQDLISQQLSGAARPTEELG 60

Query: 56  -------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                     +           G+  +TG   D A++G+ +F L+       TR G F +
Sbjct: 61  GVNPKEVGLGMMVASIDTIFTQGALQTTGVNTDLAIQGNGFFILKDGEKTFYTRAGAFGI 120

Query: 109 TDDGSLVSASGKYPVLDMA 127
             +G+LV+ +    V    
Sbjct: 121 DKEGTLVNPANGMRVQGWM 139


>gi|28952051|ref|NP_240160.2| flagellar basal body rod protein FlgF [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219681700|ref|YP_002468086.1| flagellar basal-body rod protein FlgF [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|219682255|ref|YP_002468639.1| flagellar basal-body rod protein FlgF [Buchnera aphidicola str.
           Tuc7 (Acyrthosiphon pisum)]
 gi|257471396|ref|ZP_05635395.1| flagellar basal-body rod protein FlgF [Buchnera aphidicola str.
           LSR1 (Acyrthosiphon pisum)]
 gi|219621988|gb|ACL30144.1| flagellar basal-body rod protein FlgF [Buchnera aphidicola str.
           Tuc7 (Acyrthosiphon pisum)]
 gi|219624543|gb|ACL30698.1| flagellar basal-body rod protein FlgF [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|311086650|gb|ADP66731.1| flagellar basal body rod protein FlgF [Buchnera aphidicola str.
           TLW03 (Acyrthosiphon pisum)]
 gi|311087236|gb|ADP67316.1| flagellar basal body rod protein FlgF [Buchnera aphidicola str.
           JF99 (Acyrthosiphon pisum)]
 gi|311087755|gb|ADP67834.1| flagellar basal body rod protein FlgF [Buchnera aphidicola str.
           JF98 (Acyrthosiphon pisum)]
          Length = 252

 Score =  107 bits (266), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 44/252 (17%), Positives = 90/252 (35%), Gaps = 16/252 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M+ S    + A   L ++ S +++N++N  T GF+  K  F+       N  +   S   
Sbjct: 1   MENSIYKSMIAANQLLEKQSIISNNLANISTTGFK-EKFIFA---IQNHNVKNLYNSDKK 56

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119
             KEY +   G    TG  LD  ++ D W  ++        T++G  K+     L     
Sbjct: 57  ITKEYYNLSPGILRYTGRNLDLFIKDDGWLTVKDTNGQEAYTKNGHLKINSKRKLTIQDN 116

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT----------MGLYSVDMSQGF 169
           +    +   +  +      + N       ++   ++ T               +    G 
Sbjct: 117 EVIGNNCNIIIPKNIILKILSNGVITSVKNKHKHIVETKIGSLKLVQLPSQDLIQNENGL 176

Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
              + +          ++    + V+ G LE+SN N+   M +MI   ++F     +I  
Sbjct: 177 FYLKKNNEINKKHTNTIKHSKKIRVQSGMLEESNVNASKNMIEMISNARQFEMQMKMISM 236

Query: 230 NEKSMLEAIRNI 241
            +++   A   +
Sbjct: 237 CDQNAEYA-NQL 247


>gi|149191154|ref|ZP_01869412.1| putative flagellar basal-body rod protein [Vibrio shilonii AK1]
 gi|148834992|gb|EDL51971.1| putative flagellar basal-body rod protein [Vibrio shilonii AK1]
          Length = 244

 Score =  106 bits (265), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 78/238 (32%), Gaps = 5/238 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M                     A+N+S+ DT+GF+ +          ++           
Sbjct: 1   MNPILFSAAKGAERTMLAQHVRANNLSHADTIGFKALME--HSSPMRLEGSGFLTSVTSR 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFAL---ESPRGIILTRDGRFKVTDDGSLVSA 117
           +     +   G  I T   LD ++ GD +  L   +     + TR G F++  +G L   
Sbjct: 59  TNSSINNFAQGEDIRTERPLDVSINGDGFITLEGLDGEPNELYTRAGNFRLDGNGQLYLG 118

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177
             +   ++   +           N             +    L  V      +    SG 
Sbjct: 119 ERRVMSIEGPMILPDFEFITVSANGLISVTPIGGEASVEVGALKLVKPEYDEMTMHASGH 178

Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
                   L +   V V+ G+LE SN +S+ E+  ++ LT+++     ++   ++   
Sbjct: 179 FVPKGGGVLAEDFTVQVRSGYLEASNVSSLEELVSIMSLTRQYEMQIEVMASADEIAQ 236


>gi|326389474|ref|ZP_08211041.1| fagellar hook-basal body protein [Thermoanaerobacter ethanolicus JW
           200]
 gi|325994479|gb|EGD52904.1| fagellar hook-basal body protein [Thermoanaerobacter ethanolicus JW
           200]
          Length = 417

 Score =  106 bits (265), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 60/170 (35%), Gaps = 12/170 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S    ++   A + R+  + +N++N +TVG++  ++ F E+                
Sbjct: 1   MLRSMYSAVSGLKAHQARMDVIGNNIANVNTVGYKASRMTFKEIFSQTIKGASAPQGNGG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
             +  Q    VA          G    T    D +++G+ +F + +    + TR G F  
Sbjct: 61  GTNPQQIGLGVAIASIDTLFTRGGAQRTDNPTDLSIDGNGFFIVSNGGANLYTRAGNFSF 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158
             +G LV+  G   +  M++    +               S    V  T 
Sbjct: 121 DSNGDLVTPDGYKVLGWMSTDGKTVNTDTGNLVPISLKNWSSIDPVATTQ 170



 Score = 78.0 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 14/92 (15%), Positives = 33/92 (35%), Gaps = 5/92 (5%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSM 207
           ++I  + +       G  +  N+     +        +  T     +  G LE SN +  
Sbjct: 323 QIIGQIAIADFQNPMGLEKIGNTMFINTVNSGEPMIGAAGTGTRGSINPGTLEMSNVDLS 382

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            E   MI   + F +   +I  +++ + + + 
Sbjct: 383 NEFADMIVTQRGFQANAKVITVSDEILQDLVN 414


>gi|323341368|ref|ZP_08081612.1| flagellar distal rod protein [Lactobacillus ruminis ATCC 25644]
 gi|323091245|gb|EFZ33873.1| flagellar distal rod protein [Lactobacillus ruminis ATCC 25644]
          Length = 234

 Score =  106 bits (265), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 94/256 (36%), Gaps = 38/256 (14%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK----------- 49
           M  S +   +    L++R   ++ N++N +T G+   K  F   +  ++           
Sbjct: 1   MIRSIDTLKSNFEVLQKRQEAISANIANVNTNGY-QEKKLFQSTLKNVQLHNFMGGLKNE 59

Query: 50  --NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
              ++            YL+ + GS   T  + DFA+ G  +F +      I  TR+G F
Sbjct: 60  QRVNVGNFTFGNQIDGSYLNTQSGSMHETDLKTDFAINGAGYFTVRMNNGQIGYTRNGNF 119

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
                G LV+  G   +                      G+  Q  +      + S + +
Sbjct: 120 TENRQGQLVTQEGYAVLG-------------------ANGQAIQANEANPNFMIVSFNNA 160

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
                + N+  + N   T +       V +G LE SN ++   M  +I  +++F +   +
Sbjct: 161 SALQNQGNTIYTSNTAGTQI----RSEVVQGMLEGSNTDTAQNMVDLIQTSREFEANQKV 216

Query: 227 IDENEKSMLEAIRNIA 242
           +    +++ +A+  + 
Sbjct: 217 LSTANQTLSKAVNELG 232


>gi|254516990|ref|ZP_05129048.1| flagellar basal-body rod protein FlgF [gamma proteobacterium
           NOR5-3]
 gi|219674495|gb|EED30863.1| flagellar basal-body rod protein FlgF [gamma proteobacterium
           NOR5-3]
          Length = 249

 Score =  106 bits (265), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 53/239 (22%), Positives = 94/239 (39%), Gaps = 8/239 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     I  A         +  A N++N  T GF+   V+   V   ++    +  ++  
Sbjct: 1   MDHFVYIAAAGAKESMLAQAANAHNLANASTTGFKADLVEAETVY--LRGAGTETRAYNV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALES---PRGIILTRDGRFKVTDDGSLVSA 117
                +  + G    TG +LD A+ G  WFA++S     G  +TR G F++ + G LV+ 
Sbjct: 59  IRDTGVDFDEGVLNQTGRDLDLAINGQGWFAVQSLDGNGGEGVTRRGDFRIDELGQLVNG 118

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRREN 174
           +G+  + +   + +       I + G    +       A   L     V+     + +  
Sbjct: 119 AGEALLGNDGPIALPPFSSLSIGSDGTVSIVPLGELPNAQAVLDRIKLVNPPTENLTKGE 178

Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
            G+       P+E    V +  G LE SN N +  M +MI L+++F     L+   E  
Sbjct: 179 YGLLTTNGGLPMEADGNVKMVSGALESSNVNPVTAMVRMIELSRQFEHYVKLMKVAEDV 237


>gi|218677554|ref|ZP_03525451.1| flagellar basal body rod protein FlgG [Rhizobium etli CIAT 894]
          Length = 205

 Score =  106 bits (264), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 68/203 (33%), Gaps = 7/203 (3%)

Query: 46  GAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDG 104
            A+  +       V +         G    TG +LD AL G  +F ++ +    + TR G
Sbjct: 2   QAVVPEGANIGLGVQTSAVRNLHLQGELTQTGNDLDVALIGKGFFQIQSTDGTTLYTRAG 61

Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSV 163
            F   D G LV+  G   +  +                V  K   +     +  + L   
Sbjct: 62  AFNKNDQGQLVTVDGYEVLPGITIPTGSTELTISRSGEVSAKLPGATSATTLGQLTLADF 121

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQ 218
               G     ++              +        +K+G+LE SN + + E+ ++I   +
Sbjct: 122 VNEAGLQPIGDNLFQETAASGDAVVGNPDEEGFAYMKQGYLESSNVDPVKEITELISAQR 181

Query: 219 KFNSITTLIDENEKSMLEAIRNI 241
            +   + +I   ++      +N+
Sbjct: 182 AYEMNSKVITTADEMASIVSKNL 204


>gi|254438850|ref|ZP_05052344.1| conserved domain protein [Octadecabacter antarcticus 307]
 gi|198254296|gb|EDY78610.1| conserved domain protein [Octadecabacter antarcticus 307]
          Length = 255

 Score =  106 bits (264), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 43/255 (16%), Positives = 85/255 (33%), Gaps = 31/255 (12%)

Query: 16  EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK---ISFVASGKEYLSKEVGS 72
              +S V++N++N  T  FR     FS++  A   +   +              S E GS
Sbjct: 1   MFEISVVSNNVANAGTTAFRKSTANFSDLYTAASAESASRLSLGVGSVVETTRQSGEQGS 60

Query: 73  FISTGTELDFALEGDAWF-------ALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125
            +     L+ AL G+  F         +  + +  TRDG F +  +G L +++  + +  
Sbjct: 61  LMERDGVLNLALIGNGMFVSAASAGDAQPSQLLTFTRDGEFALDKNGVLRTSTNDFVLGY 120

Query: 126 MASVPIQIPQKDEIFNV----------------GEKGEISQKGKVIATMGLYSVDMSQGF 169
                 ++ Q +  F                        S++  ++  + + +       
Sbjct: 121 DGLGGTELGQLEVPFQSVNGSTLTALEINASGVMRGTYGSEEPVILGQIAIGAFPNVTAL 180

Query: 170 VRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224
            +              L            V+ G LE SN N   E+  MI   Q+F+  +
Sbjct: 181 RQLGMGRFQATEEAGGLMLGVSGQDGFGKVQTGALESSNVNLTTELTSMIQAQQQFSGSS 240

Query: 225 TLIDENEKSMLEAIR 239
            ++      + +  R
Sbjct: 241 RILQAYSDMIEKLTR 255


>gi|167040321|ref|YP_001663306.1| hypothetical protein Teth514_1684 [Thermoanaerobacter sp. X514]
 gi|300914405|ref|ZP_07131721.1| fagellar hook-basal body protein [Thermoanaerobacter sp. X561]
 gi|307724359|ref|YP_003904110.1| fagellar hook-basal body protein [Thermoanaerobacter sp. X513]
 gi|166854561|gb|ABY92970.1| protein of unknown function DUF1078 domain protein
           [Thermoanaerobacter sp. X514]
 gi|300889340|gb|EFK84486.1| fagellar hook-basal body protein [Thermoanaerobacter sp. X561]
 gi|307581420|gb|ADN54819.1| fagellar hook-basal body protein [Thermoanaerobacter sp. X513]
          Length = 417

 Score =  106 bits (264), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 57/170 (33%), Gaps = 12/170 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S    ++   A + R+  + +N++N +TVG++  ++ F E+                
Sbjct: 1   MLRSMYSAVSGLKAHQARMDVIGNNIANVNTVGYKASRMTFKEIFSQTIKGASAPQGNGG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
             +  Q    VA          G    T    D +++G+ +F +      + TR G F  
Sbjct: 61  GTNPQQIGLGVAIASIDTLFTRGGAQRTDNPTDLSIDGNGFFIVSKGGANLYTRAGNFSF 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158
              G LV+  G   +  M++    +               S       T 
Sbjct: 121 DSQGDLVTPDGYKVLGWMSTDGKTVNTDTGNLVPISLKNWSSIDPAATTQ 170



 Score = 80.3 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 33/92 (35%), Gaps = 5/92 (5%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSM 207
           +VI  + +       G  +  N+     +        +  T     +  G LE SN +  
Sbjct: 323 QVIGQIAIADFQNPMGLEKVGNTMFINTVNSGEPMIGAAGTDTRGSINPGTLEMSNVDLA 382

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            E   MI   + F +   +I  +++ + + + 
Sbjct: 383 NEFTDMIVTQRGFQANARVITASDEILQDLVN 414


>gi|325567513|ref|ZP_08144180.1| flagellar basal-body rod protein [Enterococcus casseliflavus ATCC
           12755]
 gi|325158946|gb|EGC71092.1| flagellar basal-body rod protein [Enterococcus casseliflavus ATCC
           12755]
          Length = 233

 Score =  106 bits (264), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 40/256 (15%), Positives = 87/256 (33%), Gaps = 39/256 (15%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV-------------GA 47
           M    ++       L++R  T + N++N +T G++  K  F   +               
Sbjct: 1   MIRGLDVLSRNISLLQKRQETTSCNIANVNTTGYQA-KTLFQSALDEVALHNYQSGPNAD 59

Query: 48  IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
            + DI             +S++ G+   TG   DFAL  + +F +++  G    TR+G F
Sbjct: 60  TRRDIGGLSLGTQLAGSTISQDQGAVKQTGQASDFALLSEGYFVVQNNAGQRLYTRNGDF 119

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
            V      V+  G   +         +   +                             
Sbjct: 120 TVNQQNQYVTQEGYLVLGANGQAVSALGPANFQIQTFP---------------------P 158

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
           +       + ++ N        ++   +++G LE +N     EM  MI  +++F +    
Sbjct: 159 EALTTAGQNYVTSNAAG---TTVNAPVIQQGALEQANVAVADEMVAMIQTSREFEANQKA 215

Query: 227 IDENEKSMLEAIRNIA 242
           +    +++ +A+  + 
Sbjct: 216 LSSTNQTLQKAVNELG 231


>gi|307264876|ref|ZP_07546438.1| fagellar hook-basal body protein [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|306920134|gb|EFN50346.1| fagellar hook-basal body protein [Thermoanaerobacter wiegelii
           Rt8.B1]
          Length = 417

 Score =  106 bits (264), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 60/170 (35%), Gaps = 12/170 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S    ++   A + R+  + +N++N +TVG++  ++ F E+                
Sbjct: 1   MLRSMYSAVSGLKAHQARMDVIGNNIANVNTVGYKASRMTFKEIFSQTIKGASAPQGNGG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
             +  Q    VA          G    T    D +++G+ +F + +    + TR G F  
Sbjct: 61  GTNPQQIGLGVAIASIDTLFTRGGAQRTDNPTDLSIDGNGFFIVSNGGANLYTRAGNFSF 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158
             +G LV+  G   +  M++    +               S    V  T 
Sbjct: 121 DSNGDLVTPDGYKVLGWMSTDGKTVNTDTGNLVPISLKNWSSIDPVATTQ 170



 Score = 77.6 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 14/92 (15%), Positives = 33/92 (35%), Gaps = 5/92 (5%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSM 207
           ++I  + +       G  +  N+     +        +  T     +  G LE SN +  
Sbjct: 323 QIIGQIAIADFQNPMGLEKIGNTMFINTVNSGEPMIGAAGTGTRGSINPGTLEMSNVDLS 382

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            E   MI   + F +   +I  +++ + + + 
Sbjct: 383 NEFADMIVTQRGFQANAKVITVSDEILQDLVN 414


>gi|114777904|ref|ZP_01452818.1| hypothetical protein SPV1_05764 [Mariprofundus ferrooxydans PV-1]
 gi|114551691|gb|EAU54243.1| hypothetical protein SPV1_05764 [Mariprofundus ferrooxydans PV-1]
          Length = 247

 Score =  106 bits (264), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 53/248 (21%), Positives = 113/248 (45%), Gaps = 11/248 (4%)

Query: 1   MQTSFNI-GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID----QK 55
           M   + I G+A Q+A + +L  +A N++N ++VG+   +  FS +     +         
Sbjct: 1   MNLGYYISGVAGQMA-QNKLDGIAHNLANVNSVGYMEDRTSFSSMFSGKMSREGVPSKTS 59

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSL 114
            +++ +  +Y+S + G+   T  +LDF++ GD +F ++       LTR G FK+  +G+L
Sbjct: 60  AAYLTASTQYVSTQAGNIRQTNNDLDFSVHGDGYFRIQMKDGTEALTRAGNFKLDAEGNL 119

Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174
           ++ SG   +         I       +  + G +   G+ +A +G+  +  S+   +   
Sbjct: 120 LNQSGLAVLDKNGGP---IQLPVGKISATDNGSLYVNGQPVAELGISMIKDSRQIQKVAG 176

Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
             I          + S  +V +G LED+N NS+  M Q++   + + S+  + ++  +  
Sbjct: 177 VLIRTGQDNIQPANGSI-SVHQGELEDANVNSVLAMTQIVDTMRNYQSMMKVAEQYNQLS 235

Query: 235 LEAIRNIA 242
            +    + 
Sbjct: 236 SQLSDRVG 243


>gi|329849713|ref|ZP_08264559.1| flagellar basal-body rod protein FlgF [Asticcacaulis biprosthecum
           C19]
 gi|328841624|gb|EGF91194.1| flagellar basal-body rod protein FlgF [Asticcacaulis biprosthecum
           C19]
          Length = 249

 Score =  106 bits (263), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 54/247 (21%), Positives = 106/247 (42%), Gaps = 6/247 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID--QKISF 58
           M  +  I L+ QL L + L   A+NM+N +T G++  ++   +  GA   +       +F
Sbjct: 1   MDNASYIALSRQLTLRRELDISANNMANMNTNGYKFEQLLVHQEYGAPAYNAPIRTPANF 60

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGD-AWFALESPRGIILTRDGRFKVTDDGSLVSA 117
               +       G+F  TG  LDFA++GD  +F +++  G   TRDG F +  +G L++ 
Sbjct: 61  AYDNEVGRDFSQGTFQITGAPLDFAIDGDGVFFTVQTADGEAYTRDGAFTMNAEGMLMTQ 120

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV--IATMGLYSVDMSQGFVRRENS 175
            G   V D   + +   +     +         +G+   +  + L  +       ++  +
Sbjct: 121 DGYPVVGDGGPITMDPKKGQPAVSEDGIITQDYQGQAERVGKLNLVRITDMSDL-KKAGN 179

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
           G             +   V++GFLE SN N M E+ ++I + + + ++  +I +      
Sbjct: 180 GTYTLTSNATPVPATDARVRQGFLEASNVNPMIEVTKLIEINRAYTTLAGIIQQQHDLNK 239

Query: 236 EAIRNIA 242
            A+  + 
Sbjct: 240 SAVERLG 246


>gi|161485722|ref|NP_660672.3| flagellar basal body rod protein FlgF [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
 gi|25008455|sp|Q8K9K5|FLGF_BUCAP RecName: Full=Flagellar basal-body rod protein flgF
 gi|21623236|gb|AAM67883.1| flagellar basal-body rod protein FlgF [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
          Length = 249

 Score =  106 bits (263), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 94/249 (37%), Gaps = 13/249 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A + L  + + +A+N++N  TVGF+     F       +N  + K ++  
Sbjct: 1   MNKAIYESMNAAIKLLDKQAVIANNLANISTVGFKESFNLF----IKDRNLQNLKKTYNQ 56

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSAS- 118
           + KEY +   G+ I T   LD  ++ + W A++        T++G  K+  +G +   + 
Sbjct: 57  NVKEYYNFYPGTLIHTQRNLDLVIKNNGWLAIKDINGQEAYTKNGHIKINKEGKMTVQNY 116

Query: 119 ---GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
              G    + + +        + I    +K + S     I ++ L  +       +    
Sbjct: 117 ELIGNNGNIKIPNNVNLKISSNGIIKEIKKNKDSIIESTIGSLKLVRLQNDNLIQKENGL 176

Query: 176 GISPNIPPTPLE---DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
                      +     S V ++   LE SN N    M  MI   ++F     +I   ++
Sbjct: 177 FYLKKDNLNKYKNILHDSSVRIQSEMLEASNVNPTKNMIDMISNARQFEMNMKIISMCDQ 236

Query: 233 SMLEAIRNI 241
           +   A   +
Sbjct: 237 NTEYA-NQL 244


>gi|167037660|ref|YP_001665238.1| hypothetical protein Teth39_1248 [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|320116075|ref|YP_004186234.1| flagellar hook-basal body protein [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|166856494|gb|ABY94902.1| protein of unknown function DUF1078 domain protein
           [Thermoanaerobacter pseudethanolicus ATCC 33223]
 gi|319929166|gb|ADV79851.1| flagellar hook-basal body protein [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
          Length = 417

 Score =  106 bits (263), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 57/170 (33%), Gaps = 12/170 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S    ++   A + R+  + +N++N +TVG++  ++ F E+                
Sbjct: 1   MLRSMYSAVSGLKAHQARMDVIGNNIANVNTVGYKASRMTFKEIFSQTIKGASAPQGNGG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
             +  Q    VA          G    T    D +++G+ +F +      + TR G F  
Sbjct: 61  GTNPQQIGLGVAIASIDTLFTRGGAQRTDNPTDLSIDGNGFFIVSKGGANLYTRAGNFSF 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158
              G LV+  G   +  M++    +               S       T 
Sbjct: 121 DSQGDLVTPDGYKVLGWMSTDGKTVNTDTGNLVPISLKNWSSIDPAATTQ 170



 Score = 79.9 bits (195), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 33/92 (35%), Gaps = 5/92 (5%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSM 207
           +VI  + +       G  +  N+     +        +  T     +  G LE SN +  
Sbjct: 323 QVIGQIAIADFQNPMGLEKVGNTMFINTVNSGEPMIGAAGTDTRGSINPGTLEMSNVDLA 382

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            E   MI   + F +   +I  +++ + + + 
Sbjct: 383 NEFTDMIVTQRGFQANARVITASDEILQDLVN 414


>gi|42528268|ref|NP_973366.1| flagellar hook protein FlgE [Treponema denticola ATCC 35405]
 gi|4426943|gb|AAD20617.1| flagellar hook protein FlgE [Treponema denticola]
 gi|41819538|gb|AAS13285.1| flagellar hook protein FlgE [Treponema denticola ATCC 35405]
          Length = 463

 Score =  106 bits (263), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 55/139 (39%), Gaps = 12/139 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S   G+      + R+  + +N++N +T GF+  +V F +++    +   +      
Sbjct: 1   MMRSLFSGVTGMQNHQTRMDVIGNNVANVNTTGFKRGRVNFQDLISQQLSGAARPTEELG 60

Query: 56  -------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                     +           G+  +TG   D A++G+ +F L+       TR G F +
Sbjct: 61  GVNPKEVGLGMMVASIDTIFTQGALQTTGVNTDLAIQGNGFFILKDGEKTFYTRAGAFGI 120

Query: 109 TDDGSLVSASGKYPVLDMA 127
             +G+LV+ +    V    
Sbjct: 121 DKEGTLVNPANGMRVQGWM 139



 Score = 68.7 bits (166), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 13/92 (14%), Positives = 30/92 (32%), Gaps = 5/92 (5%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGF-----LEDSNANSM 207
           + I  + +       G  +   +    +         +  TV +G+     LE SN +  
Sbjct: 369 QEIGQIAMAGFANQGGLEKAGQNTYVQSNNSGIANVSTSGTVGKGYFIGGTLEMSNVDLT 428

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +   MI   + F +    I  ++  +   + 
Sbjct: 429 DQFVDMIVTQKGFQAGAKTIQTSDTMLETVLN 460


>gi|68164563|gb|AAY87292.1| predicted flagellar basal-body rod protein [uncultured bacterium
           BAC17H8]
          Length = 259

 Score =  105 bits (262), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 44/258 (17%), Positives = 83/258 (32%), Gaps = 23/258 (8%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN--DIDQKISFVAS 61
             +    A       +S +++N++N+ + GF+     F            ++     V  
Sbjct: 1   MISTIRNALKMATTDISIISNNIANSGSTGFKRSDGNFLHSYAEEIPIPGLNVGFGVVHE 60

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG--IILTRDGRFKVTDDGSLVSASG 119
                  + GS   T   LD A+ G   F    P    +  +RDG F +   G+LV+   
Sbjct: 61  EPRRQDHKQGSLRVTNNSLDLAINGGGMFVALKPDDGEVTFSRDGSFLIDFVGNLVTTDN 120

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV--------------IATMGLYSVDM 165
           +  V       +  P K +        ++ +                    T+ L     
Sbjct: 121 RRVVGANGEQIVIPPSKLDAAGNETLLDVIKISNTGKIQLTYGDGEMVDAGTLALAHFAN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
           S G      S         P         +   + +G LE SN N   E+ +++   Q F
Sbjct: 181 SGGLKPVGGSYFKATEKSGPAILGSPTQQNFGEIVQGHLEMSNTNVANELTKLMVSQQAF 240

Query: 221 NSITTLIDENEKSMLEAI 238
           ++ + L+    +S    +
Sbjct: 241 SASSRLMQSAIESEKRLL 258


>gi|325474542|gb|EGC77728.1| flagellar hook protein FlgE [Treponema denticola F0402]
          Length = 463

 Score =  105 bits (262), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 55/139 (39%), Gaps = 12/139 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S   G+      + R+  + +N++N +T GF+  +V F +++    +   +      
Sbjct: 1   MMRSLFSGVTGMQNHQTRMDVIGNNVANVNTTGFKRGRVNFQDLISQQLSGAARPTEELG 60

Query: 56  -------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                     +           G+  +TG   D A++G+ +F L+       TR G F +
Sbjct: 61  GVNPKEVGLGMMVASIDTIFTQGALQTTGVNTDLAIQGNGFFILKDGEKTFYTRAGAFGI 120

Query: 109 TDDGSLVSASGKYPVLDMA 127
             +G+LV+ +    V    
Sbjct: 121 DKEGTLVNPANGMRVQGWM 139



 Score = 68.7 bits (166), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 13/92 (14%), Positives = 30/92 (32%), Gaps = 5/92 (5%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGF-----LEDSNANSM 207
           + I  + +       G  +   +    +         +  TV +G+     LE SN +  
Sbjct: 369 QEIGQIAMAGFANQGGLEKAGQNTYVQSNNSGIANVSTSGTVGKGYFIGGTLEMSNVDLT 428

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +   MI   + F +    I  ++  +   + 
Sbjct: 429 DQFVDMIVTQKGFQAGAKTIQTSDTMLETVLN 460


>gi|256750749|ref|ZP_05491634.1| protein of unknown function DUF1078 domain protein
           [Thermoanaerobacter ethanolicus CCSD1]
 gi|256750332|gb|EEU63351.1| protein of unknown function DUF1078 domain protein
           [Thermoanaerobacter ethanolicus CCSD1]
          Length = 417

 Score =  105 bits (262), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 57/170 (33%), Gaps = 12/170 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S    ++   A + R+  + +N++N +TVG++  ++ F E+                
Sbjct: 1   MLRSMYSAVSGLKAHQARMDVIGNNIANVNTVGYKASRMTFKEIFSQTIKGASAPQGNGG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
             +  Q    VA          G    T    D +++G+ +F +      + TR G F  
Sbjct: 61  GTNPQQIGLGVAIASIDTLFTRGGAQRTDNPTDLSIDGNGFFIVSKGGANLYTRAGNFSF 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158
              G LV+  G   +  M++    +               S       T 
Sbjct: 121 DSQGDLVTPDGYKVLGWMSTDGKTVNTDTGNLVPISLKNWSSIDPAATTQ 170



 Score = 79.5 bits (194), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 33/92 (35%), Gaps = 5/92 (5%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSM 207
           +VI  + +       G  +  N+     +        +  T     +  G LE SN +  
Sbjct: 323 QVIGQIAIADFQNPMGLEKVGNTMFINTVNSGEPMIGAAGTNTRGSINPGTLEMSNVDLA 382

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            E   MI   + F +   +I  +++ + + + 
Sbjct: 383 NEFTDMIVTQRGFQANARVITASDEILQDLVN 414


>gi|56965597|ref|YP_177331.1| flagellar basal-body rod protein [Bacillus clausii KSM-K16]
 gi|56911843|dbj|BAD66370.1| flagellar basal-body rod protein [Bacillus clausii KSM-K16]
          Length = 262

 Score =  105 bits (261), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 47/258 (18%), Positives = 93/258 (36%), Gaps = 22/258 (8%)

Query: 6   NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK---------- 55
           +   A    L+ ++ T+++NM+N +T GF+     F++V+ +   +   +          
Sbjct: 5   HTAAATLSQLQAKIDTISNNMANAETTGFKRRSASFADVLTSEYLNQPNENRQTPHGLRV 64

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEG-DAWFALESPRGIILTRDGRFKVTDDG-- 112
            +     +  +  E G+   TG ELDFAL   D ++ +E+  G  LTRDG F  +     
Sbjct: 65  GTGAKLAQTQIQLEQGTLRETGRELDFALTEADLFYNIETVAGTRLTRDGTFYFSPQAVG 124

Query: 113 ---SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG---KVIATMGLYSVDMS 166
               LV++ G   +       +       +           +    + + +  L  V   
Sbjct: 125 NGLELVTSDGNRVLDSDGEAIVMPGDTVSLEWRDGNLFAQLRNGGEQQVGSFALTRVLRP 184

Query: 167 QGFVRRENSGISPNIPPTPLED--LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224
           Q      N+       P   E+   +   +K+  LE +N +   EM +++   +      
Sbjct: 185 QTLESGGNNLYVLPELPGVSEEVVAADEHMKQNMLEQANVDLGLEMAELMETQRLLQFQA 244

Query: 225 TLIDENEKSMLEAIRNIA 242
                 +        NI 
Sbjct: 245 RAYSFADDMAG-LANNIR 261


>gi|307718606|ref|YP_003874138.1| flagellar hook protein [Spirochaeta thermophila DSM 6192]
 gi|306532331|gb|ADN01865.1| flagellar hook protein [Spirochaeta thermophila DSM 6192]
          Length = 462

 Score =  105 bits (261), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 55/139 (39%), Gaps = 12/139 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++     + R+  + +N+SN +T GF+  +V F +++    +          
Sbjct: 1   MMRSLYAGVSGLQNHQIRMDVIGNNISNVNTTGFKKGRVNFHDMISQTLSGAARPTEEVG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                Q    +           GS  +TG   D A++G+ +F L        TR G F +
Sbjct: 61  GVNPKQVGLGMTIASIDTIHTQGSLQTTGVMTDVAIQGEGFFILRKGDRSFYTRAGVFGL 120

Query: 109 TDDGSLVSASGKYPVLDMA 127
            ++G LV+ +    V    
Sbjct: 121 DEEGYLVNPANGLRVQGWR 139



 Score = 82.6 bits (202), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 13/98 (13%), Positives = 32/98 (32%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLED 201
             +   + +  + L +     G  +   +    ++        P        +  G LE 
Sbjct: 362 YSNGNNRPLGQIALATFVNPGGLEKEGETMFRVSLNSGDPNVGPPNFAGKGKLIAGALEM 421

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +       MI   + F + +  I  +++ + E + 
Sbjct: 422 SNVDLAEAFTDMIVTQRGFQANSRTITTSDQMLQELLT 459


>gi|292492364|ref|YP_003527803.1| flagellar basal-body rod protein FlgF [Nitrosococcus halophilus
           Nc4]
 gi|291580959|gb|ADE15416.1| flagellar basal-body rod protein FlgF [Nitrosococcus halophilus
           Nc4]
          Length = 246

 Score =  105 bits (261), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 97/246 (39%), Gaps = 6/246 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + +     + Q  +    N++N +T GFR    +F  +   +  +      +  
Sbjct: 1   MDRMLYVAMTGAQQMMQATAANNHNLANLNTTGFRADLSQFRSM--PVFGEGYPTRVYAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASG 119
           + +  +   +G+  STG ELD A++G+   A++        TR G  K++ +G L + +G
Sbjct: 59  AERPGVDFTLGALQSTGRELDVAVQGEGLIAVQAFDGTEAYTRAGNLKISSNGILTTGAG 118

Query: 120 KYPVL---DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           +  +     +A  P +  +      +  +    +   +     +  V+     +++   G
Sbjct: 119 QPVLGEGGPVAVPPAETVEIGTDGTISIRPLGQEANTLAVLDRIKLVNPPLAQLKKGEDG 178

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           +            + V++  G LE SN N +  M +MI L +++     ++   E     
Sbjct: 179 LLRLAEGAVAPAEASVSLASGMLEASNVNGVDAMVEMIALARQYEMQVKMMQAAEDLDAS 238

Query: 237 AIRNIA 242
           + + + 
Sbjct: 239 SAQMLR 244


>gi|257876009|ref|ZP_05655662.1| flagellar hook-basal body complex protein [Enterococcus
           casseliflavus EC20]
 gi|257810175|gb|EEV38995.1| flagellar hook-basal body complex protein [Enterococcus
           casseliflavus EC20]
          Length = 233

 Score =  105 bits (261), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 40/256 (15%), Positives = 88/256 (34%), Gaps = 39/256 (15%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV-------------GA 47
           M    ++       L++R  T + N++N +T G++  K  F   +               
Sbjct: 1   MIRGLDVLSRNISLLQKRQETTSGNIANVNTTGYQA-KTLFQSALDEVALHNYQSGPNAD 59

Query: 48  IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
            + DI             +S++ G+   TG   DFAL  + +F +++  G    TR+G F
Sbjct: 60  TRRDIGGLSLGTQLAGSTISQDQGAVKQTGQASDFALLSEGYFVVQNNAGQRLYTRNGDF 119

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
            V      V+  G   +         +   +                             
Sbjct: 120 TVNQQNQYVTQEGYLVLGANGQAVSALGSANFQIQTFP---------------------P 158

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
           +       + ++ N+       ++   +++G LE +N     EM  MI  +++F +    
Sbjct: 159 EALTTAGQNYVTSNVAG---TTVNAPVIQQGALEQANVAVADEMVAMIQTSREFEANQKA 215

Query: 227 IDENEKSMLEAIRNIA 242
           +    +++ +A+  + 
Sbjct: 216 LSSTNQTLQKAVNELG 231


>gi|42524754|ref|NP_970134.1| hypothetical protein Bd3395 [Bdellovibrio bacteriovorus HD100]
 gi|39576964|emb|CAE78193.1| flgE [Bdellovibrio bacteriovorus HD100]
          Length = 427

 Score =  105 bits (261), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 32/146 (21%), Positives = 57/146 (39%), Gaps = 3/146 (2%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---DIDQKISF 58
            +S   G++   A  + L  + DN++N +T+GF+  + +F +++          +Q    
Sbjct: 4   LSSLYTGVSGMTAQGEALGVIGDNIANANTIGFKASRAEFQDIISKNLKGIVGGNQIGRG 63

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSAS 118
           V  G        G+  +T    D A+ GD +F ++   G   TRDG F    +G LV+  
Sbjct: 64  VKIGAVNPILSQGNIDATEKVTDLAISGDGYFKVKGSDGESYTRDGSFHFDREGYLVTND 123

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGE 144
            +            I  K        
Sbjct: 124 NQRVQGFSTDEKGNIVNKMTDIKFPR 149



 Score = 72.6 bits (176), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 30/98 (30%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSG-----ISPNIPPTPLEDLSGVTVKRGFLED 201
             + +   +A + L   +  +   +  N+       S               +    LE 
Sbjct: 327 YSNGQANDLAQIALAKFENPEALFKVGNNRLKESRDSGTASVGAPGAAGRGKLFAKSLER 386

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           S  +   E   MI   + F +    I   ++ + E I+
Sbjct: 387 STVDLATEFVNMIQNQRGFQANAKTITTTDELLNEVIQ 424


>gi|304438499|ref|ZP_07398439.1| flagellar basal body and hook protein [Selenomonas sp. oral taxon
           149 str. 67H29BP]
 gi|304368582|gb|EFM22267.1| flagellar basal body and hook protein [Selenomonas sp. oral taxon
           149 str. 67H29BP]
          Length = 711

 Score =  105 bits (261), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 51/139 (36%), Gaps = 12/139 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++     + R+  V  N++N +TVG++  +V F++ +    +          
Sbjct: 1   MMRSMFSGVSGLKGHQTRMDVVGHNIANVNTVGYKASRVTFADTLYQTSSGASAPTGNLG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                Q    +            S   TG   D AL G+  F +++  G   TRDG F+ 
Sbjct: 61  GINPKQIGLGMNVASIDTIFGDASAQGTGKNTDVALSGNGLFIVKNGSGTYYTRDGAFEF 120

Query: 109 TDDGSLVSASGKYPVLDMA 127
              G+ V       V    
Sbjct: 121 DAQGNYVLPGNGSFVQGWM 139



 Score = 74.5 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 14/88 (15%), Positives = 29/88 (32%), Gaps = 4/88 (4%)

Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV----TVKRGFLEDSNANSMYEMG 211
           A + +   +   G  R   +    +         +      T+    LE SN +   +  
Sbjct: 621 AQLAIAQFNNPSGLTRAGGNFFQQSNNSGAANVKTASDLGCTITPSALEMSNVDLADQFS 680

Query: 212 QMIHLTQKFNSITTLIDENEKSMLEAIR 239
            MI   + F S + +I   ++ +   I 
Sbjct: 681 DMIVTQRGFQSNSKIITVADEMLETLIS 708


>gi|257457611|ref|ZP_05622778.1| flagellar hook protein FlgE [Treponema vincentii ATCC 35580]
 gi|257444997|gb|EEV20073.1| flagellar hook protein FlgE [Treponema vincentii ATCC 35580]
          Length = 463

 Score =  105 bits (261), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 58/142 (40%), Gaps = 12/142 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S   G++     + R+  + +N++N +T GF+  +V F +++    +   +      
Sbjct: 1   MMRSLFSGVSGMQNHQTRMDVIGNNIANVNTTGFKRGRVNFQDLISQQLSGASRPTEEVG 60

Query: 56  -------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                     +           G+  STG   D A++G+ +F L+S      TR G F V
Sbjct: 61  GVNPKEVGLGMMVASIDTVHTQGALQSTGINTDIAVQGNGFFVLKSGEKSFYTRAGAFGV 120

Query: 109 TDDGSLVSASGKYPVLDMASVP 130
             DG++V+ +    V    +  
Sbjct: 121 DRDGTMVNPANGMRVQGWMAQE 142



 Score = 72.6 bits (176), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 21/195 (10%), Positives = 52/195 (26%), Gaps = 5/195 (2%)

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109
           ++     S   +     ++     +     +  A  G+    +     I L   G  + T
Sbjct: 266 DNYGHLASVTDTAGNASAEAGQVLVQVSYNVPGATAGEDGAPVRHTFDINLGEIGTSRNT 325

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169
                  ++ K    D  ++      K +   +      +     I  + +       G 
Sbjct: 326 ITQFAERSTTKAYEQDGYAMGYLENFKIDQSGIITGVYSNGVSHEIGQLAMAGFANQGGL 385

Query: 170 VRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224
            +   +    +                  +  G LE SN +   +   MI   + F +  
Sbjct: 386 EKAGENTYVQSNNSGIANITTSGVMGKGKLIAGTLEMSNVDLTDQFTDMIITQRGFQAGA 445

Query: 225 TLIDENEKSMLEAIR 239
             I  ++  +   + 
Sbjct: 446 KTIQTSDTMLETVLN 460


>gi|306820122|ref|ZP_07453770.1| flagellar hook protein FlgE [Eubacterium yurii subsp. margaretiae
           ATCC 43715]
 gi|304551900|gb|EFM39843.1| flagellar hook protein FlgE [Eubacterium yurii subsp. margaretiae
           ATCC 43715]
          Length = 474

 Score =  105 bits (261), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 39/206 (18%), Positives = 81/206 (39%), Gaps = 13/206 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50
           M  S N  +++    + R+  + +N++N +TV F+  +  F +    +            
Sbjct: 1   MMRSMNSAVSSLKNHQARMDVIGNNIANVNTVAFKAARTTFKDTYSQLTRAASGSSGDRG 60

Query: 51  --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
             +  Q    +       + + G+  +T    D  ++G+ +F ++ P G   TRDG F V
Sbjct: 61  GINPGQIGLGMNLSSIDNAMDKGTVETTNINTDLYIDGEGFFMVDGPDGRFYTRDGNFGV 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQK-DEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
            ++G LV+ +G Y +   A     I +K D+I    +     +    I   G  S   ++
Sbjct: 121 DEEGYLVNKNGNYVMGYQADKDGNIIEKIDKIQVPIKDVLKPKVTSNIQLEGNLSSKTAE 180

Query: 168 GFVRRENSGISPNIPPTPLEDLSGVT 193
           G      + ++      P++      
Sbjct: 181 GLPSPLPNTLATIYDKKPVDPADPSK 206



 Score = 87.6 bits (215), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 15/98 (15%), Positives = 33/98 (33%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLED 201
             +   K +  +   +     G  ++ ++  SP                   +  G LE 
Sbjct: 374 FNNGDTKALGQIVTATFSNVNGLQKQGDNLWSPTENSGEANINKPGSGGNGALLSGALEM 433

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E   MI   + F + + +I   ++ + E + 
Sbjct: 434 SNVDLAKEFTNMIVTQRGFQANSRVITTTDQMLEELVN 471


>gi|268316347|ref|YP_003290066.1| hypothetical protein Rmar_0780 [Rhodothermus marinus DSM 4252]
 gi|262333881|gb|ACY47678.1| protein of unknown function DUF1078 domain protein [Rhodothermus
           marinus DSM 4252]
          Length = 415

 Score =  104 bits (260), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 31/145 (21%), Positives = 61/145 (42%), Gaps = 11/145 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S   G++   + + R+  +++N++N +T  F+  +  F+E++G     + +      
Sbjct: 1   MIRSLRTGVSGLKSHQVRMDVISNNIANVNTTAFKRGRAAFNELLGQTLLGVGRTAGGRG 60

Query: 56  ------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109
                    V+ G   ++   G+  +TG   D  + GD +F +     I LTR G F + 
Sbjct: 61  INPSYVGLGVSVGSIDVNFAQGALENTGVATDLGINGDGFFVVRGGDRIYLTRAGNFTIN 120

Query: 110 DDGSLVSASGKYPVLDMASVPIQIP 134
             G LV+ SG            ++ 
Sbjct: 121 RFGELVTNSGLQVQGWAFDENGELQ 145



 Score = 83.4 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 24/164 (14%), Positives = 50/164 (30%), Gaps = 7/164 (4%)

Query: 83  ALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPV-LDMASVPIQIPQKDEIFN 141
           AL+   W           T +             ++       D       I        
Sbjct: 249 ALQTFDWDIDNDGTLESFTLNLAGADDALTQYAGSTTATVRDQDGQPPGSLIGFSINQEG 308

Query: 142 VGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP------PTPLEDLSGVTVK 195
           + E    +   + I  + L SV+   G  +  ++  S               +L+   + 
Sbjct: 309 IVELNFSNGYQQKIYQLALGSVNNVNGLQQVGDNLWSLTSSSGDLALGRAGVELNRTVIV 368

Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            G LE SN +   E   MI   + + +   +I  +++ + E ++
Sbjct: 369 AGTLEMSNVDLATEFTDMIVTQRGYQASARIITTSDEMLQELVQ 412


>gi|49480334|ref|YP_035891.1| flagellar basal body rod protein FlgG [Bacillus thuringiensis
           serovar konkukian str. 97-27]
 gi|49331890|gb|AAT62536.1| flagellar basal-body rod protein [Bacillus thuringiensis serovar
           konkukian str. 97-27]
          Length = 257

 Score =  104 bits (260), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 87/255 (34%), Gaps = 15/255 (5%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53
                IG    +   QR++  ++N++N  T GF+   +        +          +I 
Sbjct: 1   MNGLYIGSMGMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIG 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDA-----WFALESPRGIILTRDGRFKV 108
                V     +++   G+   T ++ DF L+        +F         LTRDG F +
Sbjct: 61  SVDYAVVPAATHVNLVQGNIQMTNSDTDFLLDDGTAGTASFFVTSKNNETFLTRDGSFTL 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV--DMS 166
             D  L + SG + + +                       +     IA +   +V  + +
Sbjct: 121 NSDRYLQTTSGAFVMGENHERIRIPEGAKVAVQADGTLYDAVTQNNIARLQTKTVGAEAN 180

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
              ++REN   +              TVK   LE+SN +   EM  ++   +  ++   +
Sbjct: 181 NRLIQRENKSFTLAEGNIADLPNGVGTVKNYMLENSNVDMTKEMADLMTDQRMISASQRV 240

Query: 227 IDENEKSMLEAIRNI 241
           +   +K   +    I
Sbjct: 241 MTSFDKIYEKEANEI 255


>gi|260768781|ref|ZP_05877715.1| flagellar basal-body rod protein FlgF [Vibrio furnissii CIP 102972]
 gi|260616811|gb|EEX41996.1| flagellar basal-body rod protein FlgF [Vibrio furnissii CIP 102972]
          Length = 229

 Score =  104 bits (260), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 88/229 (38%), Gaps = 6/229 (2%)

Query: 16  EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIS 75
                  A+N+++ +TVGF+   ++ S+ +    +     ++   +     +   G+ + 
Sbjct: 1   MLAQEVRANNLAHANTVGFK-SLMEHSDAMAVAGSGFQSSVT-TRTNSASTNFTPGAEVR 58

Query: 76  TGTELDFALEGDAWFA---LESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQ 132
           TG +LD  + G  +F+          + +R G F+++ DG L+    +    D      +
Sbjct: 59  TGRDLDVQIPGRGFFSVAGQAGEPEELYSRAGNFRLSSDGLLLLGDRQVLGEDGPIEVPE 118

Query: 133 IPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV 192
               +   +          G  +    L  V+     +    SG+        L     V
Sbjct: 119 FQAINIASDGAISITPPGGGAEMQIGLLKLVNPEYAEMTLHTSGLFVPKQGETLAFDPEV 178

Query: 193 TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
            V+ G+LE SN +S+ E+  M+ LT+++      +    + + +    +
Sbjct: 179 AVRSGYLEGSNVSSLDELVSMMALTRQYEMQVKAMASASE-IEKMGNQL 226


>gi|313895889|ref|ZP_07829443.1| fagellar hook-basal body protein [Selenomonas sp. oral taxon 137
           str. F0430]
 gi|312975314|gb|EFR40775.1| fagellar hook-basal body protein [Selenomonas sp. oral taxon 137
           str. F0430]
          Length = 274

 Score =  104 bits (260), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 69/212 (32%), Gaps = 14/212 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++   + + R+  + +N++N +T GF+  +V F +++    +          
Sbjct: 1   MMRSMFSGVSGLKSHQTRMDVIGNNIANVNTTGFKAGRVTFEDMLSQTLSGAAAPGTTIG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTRDGRFK 107
                Q    V+ G        GS   TG   D AL  G++ F ++       TR+G F+
Sbjct: 61  GTNPKQIGLGVSVGSIDTIFTDGSVQGTGKNTDLALSGGNSTFIVKRGEQTYYTRNGAFE 120

Query: 108 VTDDGSLVSA-SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
               G+ V   SG +    +           E        E  +     AT      +  
Sbjct: 121 FDAKGNYVLPGSGLHVQGWVNKTTEHSKVSTEGAVENIVVETGKMMPPKATEKATYSENL 180

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGF 198
                        +   TP   +   +   G 
Sbjct: 181 DSTTPMITGYTFSDTRTTPPTAVVRTSANDGM 212


>gi|289578425|ref|YP_003477052.1| fagellar hook-basal body protein [Thermoanaerobacter italicus Ab9]
 gi|289528138|gb|ADD02490.1| fagellar hook-basal body protein [Thermoanaerobacter italicus Ab9]
          Length = 413

 Score =  104 bits (260), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 58/170 (34%), Gaps = 12/170 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S    ++   A + R+  + +N++N +TVG++  ++ F E+                
Sbjct: 1   MLRSMYSAVSGLKAHQARMDVIGNNIANVNTVGYKASRMTFKEIFSQTIKGASAPQGNGG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
             +  Q    VA          G    T    D +++G+ +F + +    + TR G F  
Sbjct: 61  GTNPQQIGLGVAIASIDTLFTRGGAQRTDNPTDLSIDGNGFFIVSNGGANLYTRAGNFSF 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158
              G LV+  G   +  M++    +               S       T 
Sbjct: 121 DSQGDLVTPDGYKVLGWMSTDGKTVNTDTGNLVPISIKNWSSIAPAATTQ 170



 Score = 79.1 bits (193), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 14/92 (15%), Positives = 33/92 (35%), Gaps = 5/92 (5%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSM 207
           ++I  + +       G  +  N+     +        +  T     +  G LE SN +  
Sbjct: 319 QIIGQIAIADFQNPMGLEKVGNTMFINTVNSGEPMIGAAGTGTRGSINPGTLEMSNVDLA 378

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            E   MI   + F +   +I  +++ + + + 
Sbjct: 379 NEFADMIVTQRGFQANAKIITASDEMLQDLVN 410


>gi|220932517|ref|YP_002509425.1| flagellar hook protein FlgE, epsilon proteobacterial
           [Halothermothrix orenii H 168]
 gi|219993827|gb|ACL70430.1| flagellar hook protein FlgE, epsilon proteobacterial
           [Halothermothrix orenii H 168]
          Length = 519

 Score =  104 bits (260), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 66/178 (37%), Gaps = 12/178 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++   A + R+  + +N++N +TVG+++  V F E++               
Sbjct: 1   MMRSMYAGVSGLKAHQTRMDVIGNNIANVNTVGYKSSSVTFKEMLSQTLRGAKAPQGGRG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                Q    V  G   +    G+   TG   D A++G+ +F + + +  + TR GR  +
Sbjct: 61  GVNPMQVGLGVGVGSITVDHTQGNLQPTGVTTDLAIQGNGYFVVNNGQKNLFTRAGRLNL 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
            D+G LV+ S  + +    +                              G  ++  +
Sbjct: 121 DDNGYLVNVSNGFVIQGWMADISTGTINSGQDPENIHITDEYSIMNARATGNATISGN 178



 Score = 79.5 bits (194), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 13/92 (14%), Positives = 33/92 (35%), Gaps = 5/92 (5%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSM 207
           + I  + +       G ++   +  SP+      +           +  G LE SN +  
Sbjct: 425 RPIGQIAIAYFVNPSGLMKEGETLFSPSENSGDPQIGEAGSGGRGKISVGNLEMSNVDLA 484

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +   MI   + F + + +I   ++ + + + 
Sbjct: 485 EQFTDMITTQRGFQANSKIITTTDQMLQDLVN 516


>gi|291287005|ref|YP_003503821.1| fagellar hook-basal body protein [Denitrovibrio acetiphilus DSM
           12809]
 gi|290884165|gb|ADD67865.1| fagellar hook-basal body protein [Denitrovibrio acetiphilus DSM
           12809]
          Length = 209

 Score =  104 bits (259), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 48/242 (19%), Positives = 90/242 (37%), Gaps = 33/242 (13%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M      G  A    +  L   A+N++N +T  F++  ++ +E+          +   V+
Sbjct: 1   MMQGLYTGANAISVYKNSLINTANNVANINTPYFKSNTLQLNEM----------EQGGVS 50

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
                 ++++   IS+G  LDF ++G   F LE   G   TR+G F +  +G +V + G+
Sbjct: 51  ISSIRQNQDLSYTISSGRTLDFVIDGSGQFRLEDNNGTSYTRNGVFYLDAEGDVVDSGGR 110

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
             + D+           E       GE           G   V  S G    EN  +   
Sbjct: 111 KLLEDVVKPG-------ESAESLSVGEDGSFTVDGEFRGKIDVYDSYGNKIPENLYM--- 160

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
                        ++ G LE S+ +   E+  MI     F++ T+ +   +  +   +  
Sbjct: 161 -------------LRSGMLEVSDVDYAREVVDMIVTKNAFSANTSSVRTYDDMLGLIVNL 207

Query: 241 IA 242
           + 
Sbjct: 208 VG 209


>gi|206975016|ref|ZP_03235931.1| putative flagellar basal-body rod protein [Bacillus cereus
           H3081.97]
 gi|217959255|ref|YP_002337803.1| flagellar basal body rod protein FlgG [Bacillus cereus AH187]
 gi|229138473|ref|ZP_04267062.1| Flagellar basal-body rod protein flgG [Bacillus cereus BDRD-ST26]
 gi|206747035|gb|EDZ58427.1| putative flagellar basal-body rod protein [Bacillus cereus
           H3081.97]
 gi|217066007|gb|ACJ80257.1| putative flagellar basal-body rod protein [Bacillus cereus AH187]
 gi|228645010|gb|EEL01253.1| Flagellar basal-body rod protein flgG [Bacillus cereus BDRD-ST26]
          Length = 257

 Score =  104 bits (259), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 45/255 (17%), Positives = 84/255 (32%), Gaps = 15/255 (5%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53
                IG    +   QR++  ++N++N  T GF+   +        +          +I 
Sbjct: 1   MNGLYIGSMGMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIG 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDF-----ALEGDAWFALESPRGIILTRDGRFKV 108
                V     +++   G+   T +  DF     A    ++F         LTRDG F +
Sbjct: 61  SVDYAVVPAATHVNLVQGNIQMTNSATDFFLDDGANGTTSFFVTSKNDETFLTRDGSFTI 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
             D  L ++SG Y + +                             IA +   +VD    
Sbjct: 121 NSDRYLQTSSGAYVMGENNERIRIPEGAKVAVQPDGTLYDEGTQNNIARLQTKTVDAEAN 180

Query: 169 --FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
              ++REN   +               VK   LE+SN +   EM  ++   +  ++   +
Sbjct: 181 SRLMQRENKSFTLAEGNIADLPNGTGLVKNHMLENSNVDMTKEMADLMTDQRMISASQRV 240

Query: 227 IDENEKSMLEAIRNI 241
           +   +K   +    I
Sbjct: 241 MTSFDKIYEKEANEI 255


>gi|42780864|ref|NP_978111.1| flagellar basal body rod protein FlgG [Bacillus cereus ATCC 10987]
 gi|42736784|gb|AAS40719.1| flagellar basal-body rod protein, putative [Bacillus cereus ATCC
           10987]
          Length = 257

 Score =  104 bits (259), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 45/255 (17%), Positives = 85/255 (33%), Gaps = 15/255 (5%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53
                IG    +   QR++  ++N++N  T GF+   +        +          +I 
Sbjct: 1   MNGLYIGSMGMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIG 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDF-----ALEGDAWFALESPRGIILTRDGRFKV 108
                V     +++   G+   T +  DF     A    ++F         LTRDG F +
Sbjct: 61  SVDYAVVPAATHVNLVQGNIQMTNSATDFFLDDGANGTTSFFVTSKNDETFLTRDGSFTI 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM--S 166
             D  L ++SG + + +                             IA +   +VD   +
Sbjct: 121 NSDRYLQTSSGAFVMGENNERIRIPEGAKVAVQADGTLYDEVTQNNIARLQTKTVDAEAN 180

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
              V+REN   +               VK   LE+SN +   EM  ++   +  ++   +
Sbjct: 181 NRLVQRENKSFTLAEGNIADLPNGTGLVKNHMLENSNVDMTKEMADLMTDQRMISASQRV 240

Query: 227 IDENEKSMLEAIRNI 241
           +   +K   +    I
Sbjct: 241 MTSFDKIYEKEANEI 255


>gi|284989548|ref|YP_003408102.1| flagellar hook-basal body protein [Geodermatophilus obscurus DSM
           43160]
 gi|284062793|gb|ADB73731.1| flagellar hook-basal body protein [Geodermatophilus obscurus DSM
           43160]
          Length = 408

 Score =  104 bits (259), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 35/166 (21%), Positives = 64/166 (38%), Gaps = 12/166 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S N  ++   A + +L    +N++N +TVG++  +  F + +  +  +         
Sbjct: 1   MLRSMNSAISGLRAHQTKLDVTGNNIANVNTVGYKASQTVFEDTLSQVVRNGSAPTAQAG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                Q    V       + E GS  +TG   DF + GD +F  ++    + TR G F  
Sbjct: 61  GTNPAQVGLGVKVAGITTNFEQGSAQNTGRSTDFMISGDGFFITQAGNEQLYTRAGSFSY 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV 154
              G+LV+  G      MA+  +              G++ Q  + 
Sbjct: 121 DGAGNLVTPDGALLQGWMATDGVVNTNGPIRQLTVPFGDVMQPTET 166



 Score = 74.9 bits (182), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 19/129 (14%), Positives = 40/129 (31%), Gaps = 6/129 (4%)

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQK-GKVIATMGLYSVDMSQGFVRRENS 175
            SG  P     +    +       +    G  S    + I  + L +     G  +  NS
Sbjct: 277 PSGLTPARVDGNAMGSLQSISLSGDGTVMGVYSNNLREPIGKLALATFANPGGLAKAGNS 336

Query: 176 GISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
                                 ++  G LE SN +   E   +I   + F + + +I  +
Sbjct: 337 SFRVGDNSGQPAIGEPGGGGRGSLVAGALEMSNVDLAEEFTGLIVAQRGFQANSRVISSS 396

Query: 231 EKSMLEAIR 239
           ++ + + + 
Sbjct: 397 DEVLQDLVN 405


>gi|206895667|ref|YP_002246664.1| flagellar hook-basal body complex protein, putative
           [Coprothermobacter proteolyticus DSM 5265]
 gi|206738284|gb|ACI17362.1| flagellar hook-basal body complex protein, putative
           [Coprothermobacter proteolyticus DSM 5265]
          Length = 227

 Score =  104 bits (259), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 36/239 (15%), Positives = 83/239 (34%), Gaps = 15/239 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       +++ L L +    + DN+ +  T G++     F+         +        
Sbjct: 1   MLRGIYNAVSSNLMLLRAQDVIEDNLLHIQTPGYKQKNFAFTLTEQRPIVGLGNVSFGGL 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
               Y+S E  S   TG  LD A+ G  + A+++    +     R  V + G LV+  G 
Sbjct: 61  LSYPYVSIEQASLEETGRNLDLAVSG-GFLAVDANGQRLWASSLRMLVDEQGYLVTPEGY 119

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
             +     +        +        +      +I+ + +  V   + FV  +       
Sbjct: 120 RVLGKNGPIKWNENYNVDQQGNILLNDQIVDSFLISDVNVQEVVNDRYFVGEQLQSNFR- 178

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
                        V + +LE SN + + ++  ++ + + + S   ++   + ++ + I 
Sbjct: 179 -------------VFQTYLETSNVDEIGQVTALMTILRHYQSNVKVVQAEDAALAKIIN 224


>gi|302338085|ref|YP_003803291.1| fagellar hook-basal body protein [Spirochaeta smaragdinae DSM
           11293]
 gi|301635270|gb|ADK80697.1| fagellar hook-basal body protein [Spirochaeta smaragdinae DSM
           11293]
          Length = 460

 Score =  104 bits (259), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 32/141 (22%), Positives = 57/141 (40%), Gaps = 12/141 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             S   G++     + R+  + +N+SN +TVGF+  +V F +++    +           
Sbjct: 1   MRSLYAGVSGLQNHQTRMDVIGNNISNVNTVGFKKGRVNFQDLLSQTMSGAARPTDEVGG 60

Query: 54  ----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109
               Q    +           GS  +TG   D A++GD +F   S      TR G F + 
Sbjct: 61  VNPKQVGLGMNVASIDTVHTQGSLQTTGIMTDIAIQGDGFFIERSGDKEFYTRAGAFGLD 120

Query: 110 DDGSLVSASGKYPVLDMASVP 130
           ++G+LV+ S    V    +  
Sbjct: 121 ENGTLVNPSNGLRVQGWMAQD 141



 Score = 80.7 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 17/122 (13%), Positives = 36/122 (29%), Gaps = 5/122 (4%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             D   +      K +   V      +   + +  + L S     G  +   S    +  
Sbjct: 336 KQDGYGMGYLESFKIDQSGVITGVYSNGANRTLGQVALASFTNPGGLEKAGESTFVVSNN 395

Query: 183 PTPLEDLS-----GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                           +  G LE SN +   +   MI   + F + +  I  +++ + E 
Sbjct: 396 SGEARIGESGVAGKGKLIAGALEMSNVDLAEQFTDMIVTQRGFQANSRTITTSDQMLQEL 455

Query: 238 IR 239
           + 
Sbjct: 456 LT 457


>gi|288573021|ref|ZP_06391378.1| protein of unknown function DUF1078 domain protein
           [Dethiosulfovibrio peptidovorans DSM 11002]
 gi|288568762|gb|EFC90319.1| protein of unknown function DUF1078 domain protein
           [Dethiosulfovibrio peptidovorans DSM 11002]
          Length = 875

 Score =  104 bits (258), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 30/140 (21%), Positives = 56/140 (40%), Gaps = 12/140 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--------- 51
           M  S   G++   A ++RL  V +N++N +TVGF+   V F +++   +           
Sbjct: 1   MLRSLLTGVSGAKAHQKRLDVVGNNIANVNTVGFKKSTVVFQDLLSQTERGAMAPDGNVG 60

Query: 52  ---IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                Q    V           G+   TG   D A++G+ ++ + +    + TR G+F +
Sbjct: 61  GVNAKQVGLGVQVAGIETIHTQGTVSQTGNRTDMAIQGEGYYVVRNGAENLYTRAGQFVL 120

Query: 109 TDDGSLVSASGKYPVLDMAS 128
             +  L  +   Y V     
Sbjct: 121 DSNSDLAMSGTGYRVQGNEM 140



 Score = 77.6 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 45/136 (33%), Gaps = 7/136 (5%)

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
           T  GS  +            +       ++   VG       +G  +  M L      QG
Sbjct: 739 TQYGSAFTTKPYTQNGYSMGILEDFSVSNDGTIVGIYDNGQNRG--LYKMALAMFANPQG 796

Query: 169 FVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223
            V+  N+  S +I       ++       T+    LE SN +   E   +I   + F + 
Sbjct: 797 LVKTGNTCFSKSINSGDPSIVNAMVEGAGTIAGSSLEYSNVDITEEFTDLITTQRGFQAS 856

Query: 224 TTLIDENEKSMLEAIR 239
             +I  ++  + E + 
Sbjct: 857 ARVITTSDSVLEELLN 872


>gi|315186381|gb|EFU20141.1| fagellar hook-basal body protein [Spirochaeta thermophila DSM 6578]
          Length = 462

 Score =  104 bits (258), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 55/139 (39%), Gaps = 12/139 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++     + R+  + +N+SN +T GF+  +V F +++    +          
Sbjct: 1   MMRSLYAGVSGLQNHQIRMDVIGNNISNVNTTGFKKGRVNFHDMISQTLSGAARPTEEVG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                Q    +           GS  +TG   D A++G+ +F L        TR G F +
Sbjct: 61  GVNPKQVGLGMTIASIDTIHTQGSLQTTGVMTDVAVQGEGFFILRKGDRSFYTRAGVFGL 120

Query: 109 TDDGSLVSASGKYPVLDMA 127
            ++G LV+ +    V    
Sbjct: 121 DEEGYLVNPANGLRVQGWR 139



 Score = 82.6 bits (202), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 13/98 (13%), Positives = 32/98 (32%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLED 201
             +   + +  + L +     G  +   +    ++        P        +  G LE 
Sbjct: 362 YSNGNNRPLGQIALATFVNPGGLEKEGETMFRVSLNSGDPNVGPPNFAGKGKLIAGALEM 421

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +       MI   + F + +  I  +++ + E + 
Sbjct: 422 SNVDLAEAFTDMIVTQRGFQANSRTITTSDQMLQELLT 459


>gi|297584044|ref|YP_003699824.1| fagellar hook-basal body protein [Bacillus selenitireducens MLS10]
 gi|297142501|gb|ADH99258.1| fagellar hook-basal body protein [Bacillus selenitireducens MLS10]
          Length = 424

 Score =  104 bits (258), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 70/194 (36%), Gaps = 18/194 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G+      + +L  + +N+SN +T GF+  +V F+++V               
Sbjct: 1   MIRSLYSGIGGMNNFQTKLDVIGNNISNVNTFGFKKGRVTFNDLVSQQLAGASSPQEGER 60

Query: 49  -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107
              +  Q     ++         GS  STG +LD A+ GD +F +        TR G F 
Sbjct: 61  GGTNPRQVGLGGSTASIDTINTQGSLQSTGRDLDMAISGDGFFQVADGGQNFYTRAGNFY 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           + ++G LV+A G             I +   + ++         G+ +       VD+  
Sbjct: 121 LDENGMLVNADGLRLQGYGVGDDGAIDEAAGVGDL-----FIPAGEQVDPEATSQVDLRG 175

Query: 168 GFVRRENSGISPNI 181
                   G    +
Sbjct: 176 NLNADSEIGEERTV 189



 Score = 79.1 bits (193), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 14/92 (15%), Positives = 36/92 (39%), Gaps = 5/92 (5%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSM 207
           +++  + L + +   G  +  ++    +      +          ++    LE SN +  
Sbjct: 330 RLLGQVALVNFNNPSGLSKAGSNLFEVSNNSGEPQVGLAGIGGRGSLVGATLEMSNVDLS 389

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            E  +MI   + F + T +I  +++ + E I 
Sbjct: 390 EEFAEMIVSQRGFQANTRMITTSDEILQELIN 421


>gi|295399817|ref|ZP_06809798.1| fagellar hook-basal body protein [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|294978220|gb|EFG53817.1| fagellar hook-basal body protein [Geobacillus thermoglucosidasius
           C56-YS93]
          Length = 334

 Score =  104 bits (258), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 38/213 (17%), Positives = 69/213 (32%), Gaps = 22/213 (10%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  S   G+ A    + +L  + +N++N +T GF+  +  F +++    +          
Sbjct: 1   MLRSMYSGINAMKNFQVKLDVIGNNIANVNTYGFKKGRTIFQDLISQTISGASAPSQGRG 60

Query: 61  SGKEYL------------SKEVGSFISTGTELDFALEGDAWFALESP------RGIILTR 102
                                 GS   TG  LD A+ GD +F +           +  TR
Sbjct: 61  GTNPRQVGLGSQLAAIDTIHTTGSTQPTGRVLDLAISGDGFFQVAESADNTNFTNVRYTR 120

Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162
            G F +  DG LV++ G Y V   A                    ++      A    + 
Sbjct: 121 AGNFYLDKDGYLVTSDGYYVVGFAAYATGTYDPDGAAGATPPVNNVTLSPLPSAIDPKFD 180

Query: 163 VDMSQGFVRRENSGISPNIPPTPLEDLSGVTVK 195
              +      + +G++P I    +       V+
Sbjct: 181 FSSN----PPKYTGVAPTINNFTVNTGETTNVQ 209



 Score = 85.7 bits (210), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 61/194 (31%), Gaps = 9/194 (4%)

Query: 51  DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTD 110
                 +                  T + L  A++    F+   P+   +         +
Sbjct: 142 GFAAYATGTYDPDGAAGATPPVNNVTLSPLPSAIDPKFDFSSNPPKYTGVAPTINNFTVN 201

Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170
            G   +   K   +   +  + I Q   I  V   G +   G+++          + G  
Sbjct: 202 TGETTNVQYKPIKIPTDAQSVSIGQDGSITYVDRFGTLRWAGQLVLAK----FPNNGGLE 257

Query: 171 RRENSGIS-PNIPPTPLED----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225
           +   +         TP+ +         ++ G LE SN +   E  +MI   + F + T 
Sbjct: 258 KAGANLYRDTPNSGTPILNFAGAAGIGAIQSGALEMSNVDLAEEFTEMIVAQRGFQANTR 317

Query: 226 LIDENEKSMLEAIR 239
           +I  +++ + E + 
Sbjct: 318 IITTSDEILQELVN 331


>gi|332298237|ref|YP_004440159.1| flagellar hook-basal body protein [Treponema brennaborense DSM
           12168]
 gi|332181340|gb|AEE17028.1| flagellar hook-basal body protein [Treponema brennaborense DSM
           12168]
          Length = 463

 Score =  104 bits (258), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 58/142 (40%), Gaps = 12/142 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S   G++     + RL  + +N++N +T GF+  +V F +++    +   +      
Sbjct: 1   MMRSLYSGVSGMQNHQTRLDVIGNNVANVNTTGFKRGRVNFQDMISQQLSGAAKPTTEVG 60

Query: 56  -------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                     V           G+  STG   D A++G+ +F L++      TR G F +
Sbjct: 61  GVNPKEVGLGVMVASIDTVFTQGNLQSTGVATDVAIQGNGFFVLKNGEETFYTRAGAFGL 120

Query: 109 TDDGSLVSASGKYPVLDMASVP 130
             DG+LV+ +    V    +  
Sbjct: 121 DSDGTLVNPANGLRVQGWMAQE 142



 Score = 70.3 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 14/123 (11%), Positives = 37/123 (30%), Gaps = 5/123 (4%)

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
              D  ++      K +   +      +   +V+  + L +     G  +  ++    + 
Sbjct: 338 YYQDGYTMGYLDNFKIDSSGIITGVYSNGTNRVLGQIALATFSNQGGLEKAGDNTYVQSN 397

Query: 182 PPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                           ++  G LE SN +   +   MI   + F + +  I   +  +  
Sbjct: 398 NSGLANIGTSGIAGKGSMLAGSLEMSNVDLTEQFTDMIVTQRGFQASSKTIQTADTLLDT 457

Query: 237 AIR 239
            + 
Sbjct: 458 VMN 460


>gi|229195985|ref|ZP_04322737.1| Flagellar basal-body rod protein flgG [Bacillus cereus m1293]
 gi|228587367|gb|EEK45433.1| Flagellar basal-body rod protein flgG [Bacillus cereus m1293]
          Length = 257

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 45/255 (17%), Positives = 84/255 (32%), Gaps = 15/255 (5%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53
                IG    +   QR++  ++N++N  T GF+   +        +          +I 
Sbjct: 1   MNGLYIGSMGMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIG 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDF-----ALEGDAWFALESPRGIILTRDGRFKV 108
                V     +++   G+   T +  DF     A    ++F         LTRDG F +
Sbjct: 61  SVDYAVVPAATHVNLVQGNIQMTNSATDFFLDDGANGTTSFFVTSKNDETFLTRDGSFTI 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
             D  L ++SG Y + +                             IA +   +VD    
Sbjct: 121 NSDRYLQTSSGAYVMGENNERIRIPEGAKVAVQADGTLYDEGTQNNIARLQTKTVDAEAN 180

Query: 169 --FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
              ++REN   +               VK   LE+SN +   EM  ++   +  ++   +
Sbjct: 181 SRLMQRENKSFTLAEGNIADLPNGTGLVKNHMLENSNVDMTKEMADLMTNQRMISASQRV 240

Query: 227 IDENEKSMLEAIRNI 241
           +   +K   +    I
Sbjct: 241 MTSFDKIYEKEANEI 255


>gi|182418416|ref|ZP_02949710.1| flagellar basal-body rod protein FlgG [Clostridium butyricum 5521]
 gi|237666817|ref|ZP_04526802.1| flagellar basal body rod protein [Clostridium butyricum E4 str.
           BoNT E BL5262]
 gi|182377798|gb|EDT75342.1| flagellar basal-body rod protein FlgG [Clostridium butyricum 5521]
 gi|237658016|gb|EEP55571.1| flagellar basal body rod protein [Clostridium butyricum E4 str.
           BoNT E BL5262]
          Length = 259

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 51/257 (19%), Positives = 101/257 (39%), Gaps = 15/257 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGA---------- 47
           M   F   ++  + L+    T+ +N++N +  G++   +    F EV+ +          
Sbjct: 1   MIRGFYNSVSGLITLQNEEETITNNITNVNNNGYKKRLLTKQSFDEVMISNRQKLSGDKY 60

Query: 48  IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106
           ++N+I      V +         GSF ST  + DFA++G  +F   +     + TRDG F
Sbjct: 61  VRNNIGTMNLGVKTSDVETIFTQGSFKSTDKQTDFAIDGRGFFVARNANGQQVYTRDGNF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA-TMGLYSVDM 165
           KV   G L++  G   + +  +     P      N       +     +  T  L +VD 
Sbjct: 121 KVNQQGYLITNDGCEVMGNNNTTGATEPIYVGNMNFSLDSNNNIDLAGVGATHKLVTVDF 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225
                +         +        + V V +  LE SN +S  EM +++ + ++F +   
Sbjct: 181 DNEDYKNLEPLGDNYVTTANPIYNARVNVVQNALESSNVDSTDEMIKLMQVKRQFETNQK 240

Query: 226 LIDENEKSMLEAIRNIA 242
            I   ++++ +A   + 
Sbjct: 241 FIKMQDETVQKATTELG 257


>gi|229155343|ref|ZP_04283453.1| Flagellar basal-body rod protein flgG [Bacillus cereus ATCC 4342]
 gi|228628058|gb|EEK84775.1| Flagellar basal-body rod protein flgG [Bacillus cereus ATCC 4342]
          Length = 257

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 46/255 (18%), Positives = 86/255 (33%), Gaps = 15/255 (5%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53
                IG    +   QR++  ++N++N  T GF+   +        +          +I 
Sbjct: 1   MNGLYIGSMGMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIG 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEG-----DAWFALESPRGIILTRDGRFKV 108
                V     +++   G+   T +  DF L+       ++F         LTRDG F +
Sbjct: 61  SVDYAVVPAATHVNLVQGNIQMTNSATDFFLDDGASGTTSFFVTSKNDETFLTRDGSFTI 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM--S 166
             D  L ++SG Y + +                             IA +   +VD   +
Sbjct: 121 NSDRYLQTSSGAYVMGENNERIRIPEGAKVAVQADGTLYDEVTQNNIARLQTKTVDAEAN 180

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
              V+REN   +               VK   LE+SN +   EM  ++   +  ++   +
Sbjct: 181 NRLVQRENKSFTLAEGNITDLPNGTGLVKNHMLENSNVDMTKEMADLMTDQRMISASQRV 240

Query: 227 IDENEKSMLEAIRNI 241
           +   +K   +    I
Sbjct: 241 MTSFDKIYEKEANEI 255


>gi|30261777|ref|NP_844154.1| flagellar basal body rod protein FlgG [Bacillus anthracis str.
           Ames]
 gi|47527010|ref|YP_018359.1| flagellar basal body rod protein FlgG [Bacillus anthracis str.
           'Ames Ancestor']
 gi|49184611|ref|YP_027863.1| flagellar basal body rod protein FlgG [Bacillus anthracis str.
           Sterne]
 gi|65319054|ref|ZP_00392013.1| COG4786: Flagellar basal body rod protein [Bacillus anthracis str.
           A2012]
 gi|167633188|ref|ZP_02391513.1| putative flagellar basal-body rod protein [Bacillus anthracis str.
           A0442]
 gi|167638782|ref|ZP_02397057.1| putative flagellar basal-body rod protein [Bacillus anthracis str.
           A0193]
 gi|170686326|ref|ZP_02877548.1| putative flagellar basal-body rod protein [Bacillus anthracis str.
           A0465]
 gi|170706443|ref|ZP_02896903.1| putative flagellar basal-body rod protein [Bacillus anthracis str.
           A0389]
 gi|177650448|ref|ZP_02933415.1| putative flagellar basal-body rod protein [Bacillus anthracis str.
           A0174]
 gi|228914350|ref|ZP_04077965.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|229121324|ref|ZP_04250555.1| Flagellar basal-body rod protein flgG [Bacillus cereus 95/8201]
 gi|229600237|ref|YP_002866164.1| putative flagellar basal-body rod protein [Bacillus anthracis str.
           A0248]
 gi|254683274|ref|ZP_05147135.1| flagellar basal body rod protein FlgG [Bacillus anthracis str.
           CNEVA-9066]
 gi|254723857|ref|ZP_05185643.1| flagellar basal body rod protein FlgG [Bacillus anthracis str.
           A1055]
 gi|254734627|ref|ZP_05192339.1| flagellar basal body rod protein FlgG [Bacillus anthracis str.
           Western North America USA6153]
 gi|254741036|ref|ZP_05198724.1| flagellar basal body rod protein FlgG [Bacillus anthracis str.
           Kruger B]
 gi|254755279|ref|ZP_05207313.1| flagellar basal body rod protein FlgG [Bacillus anthracis str.
           Vollum]
 gi|254759816|ref|ZP_05211840.1| flagellar basal body rod protein FlgG [Bacillus anthracis str.
           Australia 94]
 gi|30256005|gb|AAP25640.1| putative flagellar basal-body rod protein [Bacillus anthracis str.
           Ames]
 gi|47502158|gb|AAT30834.1| putative flagellar basal-body rod protein [Bacillus anthracis str.
           'Ames Ancestor']
 gi|49178538|gb|AAT53914.1| flagellar basal-body rod protein, putative [Bacillus anthracis str.
           Sterne]
 gi|167513246|gb|EDR88617.1| putative flagellar basal-body rod protein [Bacillus anthracis str.
           A0193]
 gi|167531226|gb|EDR93904.1| putative flagellar basal-body rod protein [Bacillus anthracis str.
           A0442]
 gi|170128541|gb|EDS97408.1| putative flagellar basal-body rod protein [Bacillus anthracis str.
           A0389]
 gi|170670023|gb|EDT20764.1| putative flagellar basal-body rod protein [Bacillus anthracis str.
           A0465]
 gi|172083592|gb|EDT68652.1| putative flagellar basal-body rod protein [Bacillus anthracis str.
           A0174]
 gi|228662169|gb|EEL17778.1| Flagellar basal-body rod protein flgG [Bacillus cereus 95/8201]
 gi|228845344|gb|EEM90380.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|229264645|gb|ACQ46282.1| putative flagellar basal-body rod protein [Bacillus anthracis str.
           A0248]
          Length = 257

 Score =  103 bits (257), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 87/255 (34%), Gaps = 15/255 (5%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53
                IG    +   QR++  ++N++N  T GF+   +        +          +I 
Sbjct: 1   MNGLYIGSMGMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIG 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDA-----WFALESPRGIILTRDGRFKV 108
                V     +++   G+   T ++ DF L+        +F         LTRDG F +
Sbjct: 61  SVDYAVVPAATHVNLVQGNIQMTNSDTDFLLDDGTAGTASFFVTSKNNETFLTRDGSFTL 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV--DMS 166
             D  L + SG + + +                       +     IA +   +V  + +
Sbjct: 121 NSDRYLQTTSGAFVMGENNERIRIPEGAKVAVQADGTLYDAVTQNNIARLQTKTVGAEAN 180

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
              ++REN   +              TVK   LE+SN +   EM  ++   +  ++   +
Sbjct: 181 NRLIQRENKSFTLAEGNIADLPNGVGTVKNYMLENSNVDMTKEMADLMTDQRMISASQRV 240

Query: 227 IDENEKSMLEAIRNI 241
           +   +K   +    I
Sbjct: 241 MTSFDKIYEKEANEI 255


>gi|78224295|ref|YP_386042.1| hypothetical protein Gmet_3103 [Geobacter metallireducens GS-15]
 gi|78195550|gb|ABB33317.1| conserved hypothetical protein [Geobacter metallireducens GS-15]
          Length = 419

 Score =  103 bits (257), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/165 (21%), Positives = 71/165 (43%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
           ++   G++   A  + +S + +N+SN +T+GF+  ++ FS+V+ +  +   Q    V   
Sbjct: 5   SALYTGISGLNANGEAMSVIGNNISNVNTIGFKQGRMLFSDVLSSTISGGSQIGRGVQIQ 64

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                   GSF ST +  D A++GD++F +++  G   TR G F    D +LV+  G   
Sbjct: 65  TVENQFTQGSFESTESGTDLAVQGDSFFVVQNDNGRYYTRAGAFTFDKDKTLVNPEGYQV 124

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
                     +               +   +  A   + ++D +Q
Sbjct: 125 QGYGIIPSSGLADGVMKPIDLTTFATTPPKQTSAVDMVLNLDSTQ 169



 Score = 73.0 bits (177), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/221 (14%), Positives = 69/221 (31%), Gaps = 12/221 (5%)

Query: 27  SNTDTVGFRTIKVKFSEVVGAIKN-DIDQKISFVASGKEYLSKEVGSFISTGTELDFALE 85
           ++T TV FR       +    + +       S        L+ +    ++  T L  A +
Sbjct: 200 AHTATVYFRKTAANAWDWHAILPDAQAGTPGSSTTPLDGTLTFDATGALTGQTPLASAAQ 259

Query: 86  GDAWFALESPRGIILTRDG--RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVG 143
              +    +    IL   G          S+VS+  +          + I  K  +  V 
Sbjct: 260 NITFTGGVTAPQPILFGMGVGATTQYASPSIVSSQTQDGYYQGTLTKVTIDDKGYVNGVY 319

Query: 144 EKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGF 198
             GE+ +    +  + L     + G  +   +     +                 V    
Sbjct: 320 SNGELKK----LYQVALAKFASTTGLSKAGGTLFEETLDSGQPLFSNASTPGVGKVLANS 375

Query: 199 LEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           LE SN +   +  +MI   + +++ +  I   ++ + E + 
Sbjct: 376 LEQSNVDMAAQFVKMITTQRGYSANSKTITTADEMLQEVLN 416


>gi|302392387|ref|YP_003828207.1| flagellar hook-basal body protein [Acetohalobium arabaticum DSM
           5501]
 gi|302204464|gb|ADL13142.1| flagellar hook-basal body protein [Acetohalobium arabaticum DSM
           5501]
          Length = 557

 Score =  103 bits (257), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 68/183 (37%), Gaps = 12/183 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-------- 52
           M  S   G++   A + ++  + +N+SN +T G++  +V F E++               
Sbjct: 1   MMRSMYAGVSGLKAHQTKMDVIGNNISNVNTTGYKGSRVTFKEMLNQTMEGASAPQDGRG 60

Query: 53  ----DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                Q    V+ G    + E G+  STG   D AL+G+ +F +      + TR G    
Sbjct: 61  GTNPQQIGLGVSLGSIDNNMETGNLQSTGKMTDVALQGEGFFIVNDGTKNLYTRAGNLSF 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
            ++G L ++S    V    +       K    N+ +            T   Y  +++  
Sbjct: 121 DEEGYLTNSSNGNRVQGWTADEDGTIDKTNAANLEDISLDESMDASATTEAKYKDNLNPT 180

Query: 169 FVR 171
              
Sbjct: 181 LEE 183



 Score = 79.5 bits (194), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 35/98 (35%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLED 201
             +   K +A +G+ +     G  +  ++    +      +           +  G LE 
Sbjct: 457 YDNGYNKALAKIGVATFSNPAGLSKEGDTLFDTSNNSGDPQVGQAGIGGRGMIAPGSLEM 516

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   +  +MI   + F S +  I  +++ +   + 
Sbjct: 517 SNVDLARQFTEMITAQRGFQSNSKAISTSDQMLQTLVN 554


>gi|297544701|ref|YP_003677003.1| fagellar hook-basal body protein [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
 gi|296842476|gb|ADH60992.1| fagellar hook-basal body protein [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
          Length = 413

 Score =  103 bits (257), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 58/170 (34%), Gaps = 12/170 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S    ++   + + R+  + +N++N +TVG++  ++ F E+                
Sbjct: 1   MLRSMYSAVSGLKSHQARMDVIGNNIANVNTVGYKASRMTFKEIFSQTIKGASAPQGNGG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
             +  Q    VA          G    T    D +++G+ +F + +    + TR G F  
Sbjct: 61  GTNPQQIGLGVAIASIDTLFTSGGAQRTDNPTDLSIDGNGFFIVSNGGANLYTRAGNFSF 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158
              G LV+  G   +  M++    +               S       T 
Sbjct: 121 DSQGDLVTPDGYKVLGWMSTDGETVNTDTGNLVPISIKNWSSIAPAATTQ 170



 Score = 79.1 bits (193), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 14/92 (15%), Positives = 33/92 (35%), Gaps = 5/92 (5%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSM 207
           ++I  + +       G  +  N+     +        +  T     +  G LE SN +  
Sbjct: 319 QIIGQIAIADFQNPMGLEKVGNTMFINTVNSGEPMIGAAGTGTRGSINPGTLEMSNVDLA 378

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            E   MI   + F +   +I  +++ + + + 
Sbjct: 379 NEFADMIVTQRGFQANAKIITASDEMLQDLVN 410


>gi|323175233|gb|EFZ60846.1| flagellar basal-body rod protein flgG domain protein [Escherichia
           coli LT-68]
          Length = 202

 Score =  103 bits (256), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 64/194 (32%), Gaps = 7/194 (3%)

Query: 53  DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDD 111
               S   +         G+   T    D A++G  +F +  P      TRDG F+V  +
Sbjct: 8   PTLASICLTESHTALHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGSSAYTRDGSFQVDQN 67

Query: 112 GSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170
           G LV+A G      +      +         V    +       +  + L +     G  
Sbjct: 68  GQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMNDTGLE 127

Query: 171 RRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225
               +  +         + +        + +G++E SN N   E+  MI + + +   + 
Sbjct: 128 SIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAYEINSK 187

Query: 226 LIDENEKSMLEAIR 239
            +   ++ + +  +
Sbjct: 188 AVSTTDQMLQKLTQ 201


>gi|333008281|gb|EGK27755.1| flagellar basal-body rod protein flgG [Shigella flexneri K-272]
 gi|333019771|gb|EGK39043.1| flagellar basal-body rod protein flgG [Shigella flexneri K-227]
          Length = 163

 Score =  103 bits (256), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 31/137 (22%), Positives = 52/137 (37%), Gaps = 14/137 (10%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M +S  I      A +  +  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+   T    D A++G  +F +  P      TRDG F
Sbjct: 61  TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGSSAYTRDGSF 120

Query: 107 KVTDDGSLVSASGKYPV 123
           +V  +G LV+A G    
Sbjct: 121 QVDQNGQLVTAGGFQVQ 137


>gi|39995527|ref|NP_951478.1| flagellar hook protein FlgE [Geobacter sulfurreducens PCA]
 gi|39982290|gb|AAR33751.1| flagellar hook protein FlgE [Geobacter sulfurreducens PCA]
 gi|298504527|gb|ADI83250.1| flagellar hook protein FlgE [Geobacter sulfurreducens KN400]
          Length = 419

 Score =  103 bits (256), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 35/165 (21%), Positives = 71/165 (43%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
           ++   G++   A  + +S + +N+SN +T+GF+  ++ FS+V+ +  +   Q    V   
Sbjct: 5   SALYTGISGLNANGEAMSVIGNNISNVNTIGFKQGRMLFSDVLSSTISGGSQIGRGVQIQ 64

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                   GSF ST +  D A++GD++F +++  G   TR G F    D +LV+  G   
Sbjct: 65  TVENQFTQGSFESTESGTDLAIQGDSFFVVQNTSGRYYTRAGAFSFNKDKTLVNPEGYQV 124

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           +         +               +   +      + ++D +Q
Sbjct: 125 MGYGIIPSSGLSDGVLKPIDLTNFATTPPKQTSTVKFVVNLDSTQ 169



 Score = 70.3 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 11/123 (8%), Positives = 34/123 (27%), Gaps = 5/123 (4%)

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
              D            +          + + + +  + L     + G  +   +     +
Sbjct: 294 QTQDGYYQGTLTKVTIDDKGYVNGVYSNGQLQKLYQVALAKFSSTAGLSKAGGTLFEETL 353

Query: 182 PPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                            +    LE SN +   +  +MI   + +++ +  I   ++ + E
Sbjct: 354 ESGQPLFSDASTPGVGKILANSLEQSNVDMAAQFVKMITTQRGYSANSKTITTADEMLQE 413

Query: 237 AIR 239
            + 
Sbjct: 414 VLS 416


>gi|118477204|ref|YP_894355.1| flagellar basal body rod protein FlgG [Bacillus thuringiensis str.
           Al Hakam]
 gi|225863630|ref|YP_002749008.1| putative flagellar basal-body rod protein [Bacillus cereus 03BB102]
 gi|229183964|ref|ZP_04311179.1| Flagellar basal-body rod protein flgG [Bacillus cereus BGSC 6E1]
 gi|118416429|gb|ABK84848.1| flagellar basal-body rod protein [Bacillus thuringiensis str. Al
           Hakam]
 gi|225789416|gb|ACO29633.1| putative flagellar basal-body rod protein [Bacillus cereus 03BB102]
 gi|228599489|gb|EEK57094.1| Flagellar basal-body rod protein flgG [Bacillus cereus BGSC 6E1]
          Length = 257

 Score =  103 bits (256), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 85/255 (33%), Gaps = 15/255 (5%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53
                IG    +   QR++  ++N++N  T GF+   +        +          +I 
Sbjct: 1   MNGLYIGSMGMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDAYRRGDGAVTNIG 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEG-----DAWFALESPRGIILTRDGRFKV 108
                V     +++   G+   T +  DF L+       ++F         LTRDG F +
Sbjct: 61  SVDYAVVPAATHVNLVQGNIQMTNSATDFFLDDGASGTTSFFVTSKNDETFLTRDGSFTL 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
             D  L + SG + + +                       +     IA +   +VD    
Sbjct: 121 NSDRYLQTTSGAFVMGENNERIRIPEGAKVAVQADGTLYDAVTQNNIARLQTKTVDAEAN 180

Query: 169 --FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
              ++REN   +               VK   LE+SN +   EM  ++   +  ++   +
Sbjct: 181 ARLMQRENKSFTLAEGNIADLPNGTGLVKNHMLENSNVDMTKEMADLMTDQRMISASQRV 240

Query: 227 IDENEKSMLEAIRNI 241
           +   +K   +    I
Sbjct: 241 MTSFDKIYEKEANEI 255


>gi|77165837|ref|YP_344362.1| hypothetical protein Noc_2374 [Nitrosococcus oceani ATCC 19707]
 gi|254434880|ref|ZP_05048388.1| flagellar basal-body rod protein FlgF [Nitrosococcus oceani AFC27]
 gi|76884151|gb|ABA58832.1| Protein of unknown function DUF1078 [Nitrosococcus oceani ATCC
           19707]
 gi|207091213|gb|EDZ68484.1| flagellar basal-body rod protein FlgF [Nitrosococcus oceani AFC27]
          Length = 246

 Score =  103 bits (256), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 48/246 (19%), Positives = 99/246 (40%), Gaps = 6/246 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + +     + +  +    N++N +T GF+    +F  +   +  +      +  
Sbjct: 1   MDRMLYVAMTGAQQIMRATAANNHNLANLNTTGFQADLSQFRSM--PVFGEGHPTRVYAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119
           + +  +    G   STG ELD  ++G+ W A++SP G    TR G  K+T +G L + +G
Sbjct: 59  AERPGVDFTPGPLQSTGRELDVVVQGEGWLAVQSPTGGEAYTRAGNLKITSNGILTTGAG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEI---SQKGKVIATMGLYSVDMSQGFVRRENSG 176
              + +   + I   QK EI   G             +     +  V+     +++   G
Sbjct: 119 HPVLGEGGIIAIPPAQKIEIGADGTLSIRPLGQAANTLAVLDRIKLVNPPLDQLQKGEDG 178

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           +   I        + V++  G LE SN + +  + +MI L +++   T ++   E     
Sbjct: 179 LITMINGEKAPADALVSLVSGKLESSNVSGVDALVEMIALARQYEMQTKMMKTAEDLDTA 238

Query: 237 AIRNIA 242
           + + + 
Sbjct: 239 SAQMLR 244


>gi|295096224|emb|CBK85314.1| fagellar hook-basal body proteins [Enterobacter cloacae subsp.
           cloacae NCTC 9394]
          Length = 243

 Score =  103 bits (255), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 49/245 (20%), Positives = 84/245 (34%), Gaps = 15/245 (6%)

Query: 9   LAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSK 68
           + A      + +  A N++N  T GFR        V   ++       + V +       
Sbjct: 1   MGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVTASTPGADM 58

Query: 69  EVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASGKYPVLDMA 127
             G    T   LD AL+ D W A+++  G    TR+G  +V+  G L      +PV+  A
Sbjct: 59  TPGQMDYTARPLDVALQQDGWLAVQTADGGEGYTRNGNIQVSATGQL--TIQGHPVMGEA 116

Query: 128 SVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENSGISP---- 179
                    +              G    T+        V      V+R + G+      
Sbjct: 117 GPLTVPEGSELTIAADGTISALNPGDPANTVAPVGRLKLVKAEGNEVQRGDDGMFRLTQA 176

Query: 180 --NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                   L+    + V  G LE SN   +  M  MI   ++F     +I   +++  +A
Sbjct: 177 AQATRGATLQADPTIRVMSGVLEGSNVKPVEAMTDMIASARRFEMQMKIISSVDENAGKA 236

Query: 238 IRNIA 242
            + +A
Sbjct: 237 NQLLA 241


>gi|225377359|ref|ZP_03754580.1| hypothetical protein ROSEINA2194_03007 [Roseburia inulinivorans DSM
           16841]
 gi|225210784|gb|EEG93138.1| hypothetical protein ROSEINA2194_03007 [Roseburia inulinivorans DSM
           16841]
          Length = 196

 Score =  103 bits (255), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 41/196 (20%), Positives = 80/196 (40%), Gaps = 12/196 (6%)

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-----PRGIILTRDGRFKVTDD 111
             V  G+ Y + + GS   T  E D AL G+ +FA+          +  TRDG F V  +
Sbjct: 1   MGVHLGETYTNYDQGSIKVTDNETDVALAGNGFFAIAFTNKAGETSVKYTRDGAFTVNTE 60

Query: 112 GSLVSASGKYPVLDMASVPIQIP-----QKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           G LV+  G Y +    +             +    + E G I Q  +++  +G+   D  
Sbjct: 61  GYLVTKDGDYVLNQAGAQNTDPNARIRLNPNAKITIDELGNIYQNDQLVTRIGVVDFDDY 120

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
               +   +                  V++G +E SN N + EM +MI +++ + +   +
Sbjct: 121 NYISKYGENLYDLVDGGQITASD--AKVQQGCIEGSNVNVVDEMVKMITISRAYQAGQKV 178

Query: 227 IDENEKSMLEAIRNIA 242
           I+  ++++ + +  + 
Sbjct: 179 INTVDETLDKTVNQVG 194


>gi|20807880|ref|NP_623051.1| flagellar basal body and hook proteins [Thermoanaerobacter
           tengcongensis MB4]
 gi|254478868|ref|ZP_05092232.1| Flagellar basal body protein FlgE [Carboxydibrachium pacificum DSM
           12653]
 gi|20516445|gb|AAM24655.1| Flagellar basal body and hook proteins [Thermoanaerobacter
           tengcongensis MB4]
 gi|214035181|gb|EEB75891.1| Flagellar basal body protein FlgE [Carboxydibrachium pacificum DSM
           12653]
          Length = 415

 Score =  103 bits (255), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 58/146 (39%), Gaps = 12/146 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S    ++   A + RL  + +N++N +TVG++  ++ F E+                
Sbjct: 1   MLRSMYSAISGLQAHQARLDVIGNNIANVNTVGYKASRMTFKEIFSQTIKGASAPQGNGG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
             +  Q    VA          G    T    D +++G+ +F + +   I+ TR G F  
Sbjct: 61  GTNPQQIGLGVAIASIDTLFTRGGAQRTDNPTDLSIDGNGFFIVSNGESILYTRAGNFSF 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIP 134
             +G LV+  G   +  M++    + 
Sbjct: 121 DSNGDLVTPDGYKVLGWMSTDGKTVN 146



 Score = 80.3 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 33/92 (35%), Gaps = 5/92 (5%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS-----GVTVKRGFLEDSNANSM 207
           +VI  + L       G  +  N+     +        +       ++  G LE SN N  
Sbjct: 321 QVIGQIALADFQNPMGLEKVGNTMFINTVNSGEPMIGAAGSGTRGSINPGTLEMSNVNLA 380

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            E   MI   + F +   +I  +++ + + + 
Sbjct: 381 NEFVDMITTQRGFQANAKVITVSDEMLQDLVN 412


>gi|148269402|ref|YP_001243862.1| hypothetical protein Tpet_0257 [Thermotoga petrophila RKU-1]
 gi|147734946|gb|ABQ46286.1| protein of unknown function DUF1078 domain protein [Thermotoga
           petrophila RKU-1]
          Length = 623

 Score =  103 bits (255), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 38/207 (18%), Positives = 69/207 (33%), Gaps = 13/207 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G+      +  +  V +N+SN +TVGF+  +V F  ++               
Sbjct: 1   MMRSLYSGITGLKNFQVAMDVVGNNISNVNTVGFKASRVNFETMLAQTIKAGRSPQENVG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
             +  Q                GSF +TG + D A++GD +F +        TR G F +
Sbjct: 61  GTNPMQIGLGSQVSSIDKIMTQGSFQNTGVKTDLAIQGDGFFIVSDGSSYYYTRAGAFTL 120

Query: 109 TDDGSLV-SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
             +G+L+ +++G       A    +  ++    N      +   G  +      +V    
Sbjct: 121 DSNGNLIQTSTGYKVQGWTAVQDPETGERYIDTNKPIGDLVISAGMTMPAKKTSNVRFEG 180

Query: 168 GFVRRENSGISPNIPPTPLEDLSGVTV 194
               +   G               V V
Sbjct: 181 NLNSKLGPGSFVITLTDENGINHDVRV 207



 Score = 83.4 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 18/125 (14%), Positives = 37/125 (29%), Gaps = 6/125 (4%)

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQK-GKVIATMGLYSVDMSQGFVRRENSGISP 179
                  +    +            G  S     V+  + L   +   G     NS    
Sbjct: 496 NIPWQDGNPMGVLESFAINEQGEIIGTFSNGLTDVLGQIALAVFNNPSGLSEVGNSLYVV 555

Query: 180 NIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
           +      +  +  +     +  G LE SN +   E  +MI   + F +   +I   ++ +
Sbjct: 556 SANSGVPKIGAPGSGGRGILIPGALEMSNVDLAEEFTKMIVAQRGFQANARVITTADQIL 615

Query: 235 LEAIR 239
            E + 
Sbjct: 616 NELVN 620


>gi|224373467|ref|YP_002607839.1| flagellar hook protein FlgE [Nautilia profundicola AmH]
 gi|223588607|gb|ACM92343.1| flagellar hook protein FlgE [Nautilia profundicola AmH]
          Length = 853

 Score =  103 bits (255), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 64/203 (31%), Gaps = 14/203 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G++   A +  +   A+N++N +TVGF+  +  F  ++               
Sbjct: 1   MMRSLWSGVSGLNAHQIAMDVEANNIANVNTVGFKYSRTNFQNLLSQTVKSATAPQGDLG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF--ALESPRGIILTRDGRF 106
             +  Q     +        + GS  +T    D A+ GD +F  + +  +    TR G F
Sbjct: 61  GKNSLQIGLGTSVSAVETMFKQGSIQNTDKNTDMAINGDGFFVVSGDGGKTYRYTRAGDF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
               +G+ V  +G      +A                             +      +++
Sbjct: 121 TFDANGNFVDPNGYIVQGWLADPETHTIDTASGVKPISIPPGLTTPANPTSKIAIKANLN 180

Query: 167 QGFVRRENSGISPNIPPTPLEDL 189
            G    E  G    +  T   + 
Sbjct: 181 SGDHITEMDGTRTTVDQTADING 203



 Score = 71.8 bits (174), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 11/94 (11%), Positives = 36/94 (38%), Gaps = 5/94 (5%)

Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNAN 205
           +   +A + +     ++G +    +  S +                 +++   LE SN +
Sbjct: 757 RSYSLAQVAIAKFVNNEGLMSEGGTLFSASPNSGEPIIGTAGTGGRGSIQPSSLEMSNVD 816

Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
               + Q+I + + F + +  I  +++ +   ++
Sbjct: 817 LSRSLTQLIVIQRGFQANSKTITTSDQMLNTLLQ 850


>gi|304316900|ref|YP_003852045.1| fagellar hook-basal body protein [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778402|gb|ADL68961.1| fagellar hook-basal body protein [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 420

 Score =  103 bits (255), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 55/146 (37%), Gaps = 12/146 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S    ++   A +  +  + +N++N +TVGF+  ++ F E+                
Sbjct: 1   MLRSMYSAVSGLKAHQAEMDVIGNNIANVNTVGFKASRMTFKEIFNQTIKGASAPQGSGG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
             +  Q    VA          G    T    D +++G+ +F + +    + TR G F  
Sbjct: 61  GTNPQQVGLGVAIASIDTLFTNGGSQRTDNPTDLSIDGNGFFIVNNGGANLYTRAGNFSF 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIP 134
             +G LV+  G   +  ++     + 
Sbjct: 121 DSNGDLVTPDGYKVMGWISQDGKTVN 146



 Score = 79.5 bits (194), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 17/98 (17%), Positives = 38/98 (38%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLED 201
             + + +VI  + L     +QG  +  N+     +             +  T+  G LE 
Sbjct: 320 YSNGRTQVIGQIALADFQNTQGLEKVGNTMFINTVNSGDPMIGAANTGTRGTINPGTLEM 379

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E   MI   + F + + +I  +++ + + + 
Sbjct: 380 SNVDLANEFANMITTQRGFEANSKVITTSDEILQDLVN 417


>gi|323705438|ref|ZP_08117013.1| fagellar hook-basal body protein [Thermoanaerobacterium
           xylanolyticum LX-11]
 gi|323535340|gb|EGB25116.1| fagellar hook-basal body protein [Thermoanaerobacterium
           xylanolyticum LX-11]
          Length = 424

 Score =  103 bits (255), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 55/146 (37%), Gaps = 12/146 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S    ++   A +  +  + +N++N +TVGF+  ++ F E+                
Sbjct: 1   MLRSMYSAVSGLKANQAEMDVIGNNIANVNTVGFKASRMTFKEIFNQTIKGASAPQDNGG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
             +  Q    VA          G    T    D +++G+ +F + +    + TR G F  
Sbjct: 61  GTNPQQIGLGVAIASIDTLFSNGGSQRTDNPTDLSIDGNGFFIVNNGGANLYTRAGNFSF 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIP 134
             +G LV+  G   +  ++     + 
Sbjct: 121 DSNGDLVTPDGYKVMGWISQDGKTVN 146



 Score = 78.8 bits (192), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 38/101 (37%), Gaps = 5/101 (4%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLED 201
             + + +VI  + L     +QG  +  N+     +             +  T+  G LE 
Sbjct: 324 YSNGRTQVIGQIALADFQNTQGLEKVGNTMFINTVNSGDPMIGAANTGTRGTIDPGTLEM 383

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           SN +   E   MI   + F +   +I  +++ + + +  I 
Sbjct: 384 SNVDLANEFANMITTQRGFEANAKVITTSDEILQDLVNLIR 424


>gi|47565441|ref|ZP_00236482.1| flagellar basal-body rod protein flgF, putative [Bacillus cereus
           G9241]
 gi|47557431|gb|EAL15758.1| flagellar basal-body rod protein flgF, putative [Bacillus cereus
           G9241]
          Length = 257

 Score =  103 bits (255), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 45/255 (17%), Positives = 83/255 (32%), Gaps = 15/255 (5%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53
                IG    +   QR++  ++N++N  T GF+   +        +          +I 
Sbjct: 1   MNGLYIGSMGMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIG 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDF-----ALEGDAWFALESPRGIILTRDGRFKV 108
                V     +++   G+   T +  DF     A    ++F         LTRDG F +
Sbjct: 61  SVDYAVVPAATHVNLVQGNIQMTNSATDFFLDDGAAGTTSFFVTSKNDETFLTRDGSFTI 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
             D  L ++SG Y +                               IA +   +VD    
Sbjct: 121 NSDRYLQTSSGAYVMDVNNERVRIPEGAKIAVQADGTLYDEGTQNNIARLQTKTVDAEAN 180

Query: 169 --FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
              ++REN   +               VK   LE+SN +   EM  ++   +  ++   +
Sbjct: 181 ARLMQRENKSFTLAEGNIADLPNGTGLVKNHMLENSNVDMTKEMADLMTDQRMISASQRV 240

Query: 227 IDENEKSMLEAIRNI 241
           +   +K   +    I
Sbjct: 241 MTSFDKIYEKEANEI 255


>gi|229160734|ref|ZP_04288726.1| Flagellar basal-body rod protein flgG [Bacillus cereus R309803]
 gi|228622749|gb|EEK79583.1| Flagellar basal-body rod protein flgG [Bacillus cereus R309803]
          Length = 257

 Score =  102 bits (254), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 46/255 (18%), Positives = 84/255 (32%), Gaps = 15/255 (5%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53
                IG    +   QR++  ++N++N  T GF+   +        +          +I 
Sbjct: 1   MNGLYIGSMGMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIG 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDF-----ALEGDAWFALESPRGIILTRDGRFKV 108
                V     +++   G+   T +  DF     A    ++F         LTRDG F V
Sbjct: 61  SVDYAVVPAATHVNLVQGNIQMTNSATDFFLDDGAAGTTSFFVTSKNDETFLTRDGSFTV 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM--S 166
             D  L ++SG + + +                             IA +   +VD   +
Sbjct: 121 NSDRYLQTSSGAFVMGENNERIRIPEGVKVAVQADGTLYDEITQNNIARLQTKTVDAETN 180

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
              V+REN   +               VK   LE+SN +   EM  ++   +   +   +
Sbjct: 181 NRLVQRENKSFTLAEGNIADLPNGTGIVKNHMLENSNVDMTKEMADLMASQKMIQASQRI 240

Query: 227 IDENEKSMLEAIRNI 241
           +   +K   +    I
Sbjct: 241 MTSFDKIYEKEANEI 255


>gi|324325790|gb|ADY21050.1| flagellar basal body rod protein FlgG [Bacillus thuringiensis
           serovar finitimus YBT-020]
          Length = 257

 Score =  102 bits (254), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 45/255 (17%), Positives = 83/255 (32%), Gaps = 15/255 (5%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53
                IG    +   QR++  ++N++N  T GF+   +        +          +I 
Sbjct: 1   MNGLYIGSMGMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIG 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDF-----ALEGDAWFALESPRGIILTRDGRFKV 108
                V     +++   G+   T +  DF     A    ++F         LTRDG F +
Sbjct: 61  SVDYAVVPAATHVNLVQGNIQMTNSATDFFLDDGANGTTSFFVTSKNDETFLTRDGSFTI 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
             D  L ++SG Y +                               IA +   +VD    
Sbjct: 121 NSDRYLQTSSGAYVMDVNNERVRIPEGAKIAVQADGTLYDEGTQNNIARLQTKTVDAEAN 180

Query: 169 --FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
              ++REN   +               VK   LE+SN +   EM  ++   +  ++   +
Sbjct: 181 SRLMQRENKSFTLAEGNIADLPNGTGLVKNHMLENSNVDMTKEMADLMTDQRMISASQRV 240

Query: 227 IDENEKSMLEAIRNI 241
           +   +K   +    I
Sbjct: 241 MTSFDKIYEKEANEI 255


>gi|123442782|ref|YP_001006759.1| flagellar basal-body rod protein FlgG [Yersinia enterocolitica
           subsp. enterocolitica 8081]
 gi|122089743|emb|CAL12596.1| flagellar basal-body rod protein FlgG [Yersinia enterocolitica
           subsp. enterocolitica 8081]
          Length = 217

 Score =  102 bits (254), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 67/193 (34%), Gaps = 7/193 (3%)

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDG 112
           Q  + V           G+   T    D A++G+ +F ++ P G    TRDG F+   +G
Sbjct: 24  QIGTGVRPVATERLHSQGNLSKTDNTKDVAIKGEGFFQVQMPDGTNAYTRDGSFQTDQNG 83

Query: 113 SLVSASGKYPVLDMASVPIQI-PQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171
            LV++ G      +      +         V          + +  + L +   + G   
Sbjct: 84  QLVTSGGFQIQPAITIPANAMSMTVGRDGIVSVTLPGQTATQQVGQLTLATFINNSGLES 143

Query: 172 RENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
              +            +       G  + +G++E SN N   E+  MI   + +   +  
Sbjct: 144 VGENLYQETASSGAPNETTPGLNGGGLLYQGYVETSNVNVAEELVNMIQTQRAYEINSKA 203

Query: 227 IDENEKSMLEAIR 239
           +  +++ + +  +
Sbjct: 204 VSTSDQMLQKLTQ 216


>gi|52143687|ref|YP_083142.1| flagellar basal body rod protein FlgG [Bacillus cereus E33L]
 gi|51977156|gb|AAU18706.1| flagellar basal-body rod protein [Bacillus cereus E33L]
          Length = 257

 Score =  102 bits (254), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 85/255 (33%), Gaps = 15/255 (5%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53
                IG    +   QR++  ++N++N  T GF+   +        +          +I 
Sbjct: 1   MNGLYIGSMGMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIG 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDA-----WFALESPRGIILTRDGRFKV 108
                V     +++   G+   T +  DF L+        +F         LTRDG F +
Sbjct: 61  SVDYAVVPAATHVNLVQGNIQMTNSATDFFLDDGTAGTASFFVTSKNNETFLTRDGSFTL 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV--DMS 166
             D  L + SG + + +                       +     IA +   +V  + +
Sbjct: 121 NSDRYLQTTSGAFVMGENNERIRIPEGAKVAVQADGTLYDAVTQNNIARLQTKTVGAEAN 180

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
              V+REN   +               VK   LE+SN +   EM  ++   +  ++   +
Sbjct: 181 NRLVQRENKSFTLAEGNIDDLPNGTGLVKNHMLENSNVDMTKEMADLMTDQRMISASQRV 240

Query: 227 IDENEKSMLEAIRNI 241
           +   +K   +    I
Sbjct: 241 MTSFDKIYEKEANEI 255


>gi|229144385|ref|ZP_04272790.1| Flagellar basal-body rod protein flgG [Bacillus cereus BDRD-ST24]
 gi|228639016|gb|EEK95441.1| Flagellar basal-body rod protein flgG [Bacillus cereus BDRD-ST24]
          Length = 257

 Score =  102 bits (254), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 82/255 (32%), Gaps = 15/255 (5%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53
                IG    +   QR++  ++N++N  T GF+   +        +          +I 
Sbjct: 1   MNGLYIGSMGMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIG 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDF-----ALEGDAWFALESPRGIILTRDGRFKV 108
                V     +++   G+   T +  DF     A    ++F         LTRDG F +
Sbjct: 61  SVDYAVVPAATHVNLVQGNIQMTNSATDFFLDDGAAGTTSFFVTSKNDETFLTRDGSFTL 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
             D  L ++SG + + +                             I  +   +VD    
Sbjct: 121 NSDRYLQTSSGAFVMGENNERIRIPEGAKVAVQADGTLYDEVTQNNIGRLQTKTVDAETN 180

Query: 169 --FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
              V+REN   +               VK   LE+SN +   EM  ++   +   +   +
Sbjct: 181 ARLVQRENKSFTLAEGNIANLPNGTGIVKNHMLENSNVDMTKEMADLMTDQKMIQASQRV 240

Query: 227 IDENEKSMLEAIRNI 241
           +   +K   +    I
Sbjct: 241 MTSFDKIYEKEANEI 255


>gi|326939385|gb|AEA15281.1| flagellar basal body rod protein FlgG [Bacillus thuringiensis
           serovar chinensis CT-43]
          Length = 257

 Score =  102 bits (254), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 45/255 (17%), Positives = 83/255 (32%), Gaps = 15/255 (5%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53
                IG    +   QR++  ++N++N  T GF+   +        +          +I 
Sbjct: 1   MNGLYIGSMGMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGVVTNIG 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDF-----ALEGDAWFALESPRGIILTRDGRFKV 108
                V     +++   G+   T +  DF     A    ++F         LTRDG F +
Sbjct: 61  SVDYAVVPAATHVNLVQGNIQMTNSATDFFLDDGAAGTTSFFVTSKNDETFLTRDGSFTL 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
             D  L ++SG + + +                             IA +   +VD    
Sbjct: 121 NSDRYLQTSSGAFVMGENNERIRIPEGAKVAVQADGTLYDEITQNNIARLQTKTVDAETN 180

Query: 169 --FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
              V+REN   +               VK   LE+SN +   EM  ++   +   +   +
Sbjct: 181 ARLVQRENKSFTLAEGNIANLPNGTGIVKNHMLENSNVDMTKEMADLMTDQKMIQASQRV 240

Query: 227 IDENEKSMLEAIRNI 241
           +   +K   +    I
Sbjct: 241 MTSFDKIYEKEANEI 255


>gi|229069323|ref|ZP_04202613.1| Flagellar basal-body rod protein flgG [Bacillus cereus F65185]
 gi|229078954|ref|ZP_04211506.1| Flagellar basal-body rod protein flgG [Bacillus cereus Rock4-2]
 gi|228704368|gb|EEL56802.1| Flagellar basal-body rod protein flgG [Bacillus cereus Rock4-2]
 gi|228713810|gb|EEL65695.1| Flagellar basal-body rod protein flgG [Bacillus cereus F65185]
          Length = 257

 Score =  102 bits (254), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 82/255 (32%), Gaps = 15/255 (5%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53
                IG    +   QR++  ++N++N  T GF+   +        +          +I 
Sbjct: 1   MNGLYIGSMGMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIG 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDF-----ALEGDAWFALESPRGIILTRDGRFKV 108
                V     +++   G+   T +  DF     A    ++F         LTRDG F +
Sbjct: 61  SVDYAVVPAATHVNLVQGNIQMTNSATDFFLDDGAAGTTSFFVTSKNDETFLTRDGSFTL 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
             D  L ++SG + + +                             I  +   +VD    
Sbjct: 121 NSDRYLQTSSGAFVMGENNERIRIPEGAKVAVQADGTLYDEVTQNNIGRLQTKTVDAETN 180

Query: 169 --FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
              V+REN   +               VK   LE+SN +   EM  ++   +   +   +
Sbjct: 181 ARLVQRENKSFTLAEGNVANLPNGTGIVKNHMLENSNVDMTKEMADLMTDQKMIQASQRV 240

Query: 227 IDENEKSMLEAIRNI 241
           +   +K   +    I
Sbjct: 241 MTSFDKIYEKEANEI 255


>gi|188586026|ref|YP_001917571.1| protein of unknown function DUF1078 domain protein [Natranaerobius
           thermophilus JW/NM-WN-LF]
 gi|179350713|gb|ACB84983.1| protein of unknown function DUF1078 domain protein [Natranaerobius
           thermophilus JW/NM-WN-LF]
          Length = 508

 Score =  102 bits (254), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 43/187 (22%), Positives = 68/187 (36%), Gaps = 15/187 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49
           M  S   G++     + RL T+ +N++N +T GF+  +V F +                 
Sbjct: 1   MLRSMYSGVSGLRNHQTRLDTIGNNVANVNTAGFKGDRVTFQDAFNQTLEAASAPNERGG 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109
            +  Q    +  G        GS  +TG + D A+EGD +F +   +  + TR G F V 
Sbjct: 61  TNPQQVGLGMNIGSMDTIHTQGSLENTGRDTDLAIEGDGFFVVNDGQSDMFTRVGNFGVD 120

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169
            +G+LVS    Y V             DEI            G V+      +V  +   
Sbjct: 121 SEGNLVSQGTGYKVQG----YAYDEDADEINTDEIVDMEIPLGDVVDPEATENVKYNGNL 176

Query: 170 VRRENSG 176
                 G
Sbjct: 177 NSNTEPG 183



 Score = 80.3 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 13/98 (13%), Positives = 30/98 (30%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLED 201
             + + + +  + L       G  +  +    P                   +  G LE 
Sbjct: 408 YTNGETRQLGQVVLSDFTNPGGLEKLGSGLYQPTRNSGEPSYGIAGTGGRGEIAPGALEM 467

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   +   MI   + F + +  I   ++ + E + 
Sbjct: 468 SNVDMGEQFTDMIVTQRGFQANSRSITTGDEVLQELVN 505


>gi|89895710|ref|YP_519197.1| hypothetical protein DSY2964 [Desulfitobacterium hafniense Y51]
 gi|89335158|dbj|BAE84753.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 383

 Score =  102 bits (254), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 69/207 (33%), Gaps = 13/207 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S    ++     + ++  + +N++N +T GF+  +V FS ++               
Sbjct: 1   MLRSLYSAISGLKNHQIKMDVIGNNIANVNTTGFKRSRVTFSTMLSQTMKGAGSPSANQG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                Q                GS  STG + D  ++G  +F L++    + +R G F  
Sbjct: 61  GTNPAQIGLGSMVSSIDQIMTPGSSQSTGKDTDMMIQGKGFFVLQNNGETVYSRAGAFTQ 120

Query: 109 TDDGSLV-SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
            DDG+L    +G   +  M  +   +           K + +    +   +G     +  
Sbjct: 121 DDDGTLTEPGTGAKVMGHMYGMEKSVDTMSTTTEDESKIDWTTLEAIKFNLGENPPYVLS 180

Query: 168 GFVRRENSGISPNIPPTPLEDLSGVTV 194
              +        +       + S + V
Sbjct: 181 EATKIPPDAWVKSGDEWVYSNPSLIGV 207



 Score = 73.7 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 32/92 (34%), Gaps = 5/92 (5%)

Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS-----GVTVKRGFLEDSNANS 206
            +VI  + + S     G +   NS  + +                  +    +E SN + 
Sbjct: 287 SRVIGQVAIASFSNDAGLLNLGNSFYAASNNSGQASIGGAGEDGRGNIVPSTVEMSNVDL 346

Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
             E   MI   + F + + +I  ++  + E I
Sbjct: 347 SQEFTDMIVTQRGFQANSRVITVSDSLLQELI 378


>gi|206970637|ref|ZP_03231589.1| putative flagellar basal-body rod protein [Bacillus cereus AH1134]
 gi|206734273|gb|EDZ51443.1| putative flagellar basal-body rod protein [Bacillus cereus AH1134]
          Length = 257

 Score =  102 bits (254), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 82/255 (32%), Gaps = 15/255 (5%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53
                IG    +   QR++  ++N++N  T GF+   +        +          +I 
Sbjct: 1   MNGLYIGSMGMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIG 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDF-----ALEGDAWFALESPRGIILTRDGRFKV 108
                V     +++   G+   T +  DF     A    ++F         LTRDG F +
Sbjct: 61  SVDYAVVPAATHVNLVQGNIQMTNSATDFFLDDGAAGTTSFFVTSKNDETFLTRDGSFTL 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
             D  L ++SG + + +                             I  +   +VD    
Sbjct: 121 NSDRYLQTSSGAFVMGENNERIRIPEGAKVAVQADGTLYDEATQNNIGRLQTKTVDAETN 180

Query: 169 --FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
              V+REN   +               VK   LE+SN +   EM  ++   +   +   +
Sbjct: 181 ARLVQRENKSFTLAEGNIANLPNGTGIVKNHMLENSNVDMTKEMADLMTDQKMIQASQRV 240

Query: 227 IDENEKSMLEAIRNI 241
           +   +K   +    I
Sbjct: 241 MTSFDKIYEKEANEI 255


>gi|30019815|ref|NP_831446.1| flagellar basal body rod protein FlgG [Bacillus cereus ATCC 14579]
 gi|218235496|ref|YP_002366457.1| flagellar basal body rod protein FlgG [Bacillus cereus B4264]
 gi|218896706|ref|YP_002445117.1| putative flagellar basal-body rod protein [Bacillus cereus G9842]
 gi|228907405|ref|ZP_04071263.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis IBL
           200]
 gi|228952155|ref|ZP_04114247.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|228958053|ref|ZP_04119788.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|229043528|ref|ZP_04191237.1| Flagellar basal-body rod protein flgG [Bacillus cereus AH676]
 gi|229109228|ref|ZP_04238827.1| Flagellar basal-body rod protein flgG [Bacillus cereus Rock1-15]
 gi|229127099|ref|ZP_04256096.1| Flagellar basal-body rod protein flgG [Bacillus cereus BDRD-Cer4]
 gi|229149977|ref|ZP_04278203.1| Flagellar basal-body rod protein flgG [Bacillus cereus m1550]
 gi|29895360|gb|AAP08647.1| Flagellar basal-body rod protein flgG [Bacillus cereus ATCC 14579]
 gi|218163453|gb|ACK63445.1| putative flagellar basal-body rod protein [Bacillus cereus B4264]
 gi|218540813|gb|ACK93207.1| putative flagellar basal-body rod protein [Bacillus cereus G9842]
 gi|228633499|gb|EEK90102.1| Flagellar basal-body rod protein flgG [Bacillus cereus m1550]
 gi|228656215|gb|EEL12056.1| Flagellar basal-body rod protein flgG [Bacillus cereus BDRD-Cer4]
 gi|228674238|gb|EEL29483.1| Flagellar basal-body rod protein flgG [Bacillus cereus Rock1-15]
 gi|228725750|gb|EEL76998.1| Flagellar basal-body rod protein flgG [Bacillus cereus AH676]
 gi|228801570|gb|EEM48452.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|228807509|gb|EEM54036.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|228852266|gb|EEM97062.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis IBL
           200]
          Length = 257

 Score =  102 bits (253), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 45/255 (17%), Positives = 83/255 (32%), Gaps = 15/255 (5%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53
                IG    +   QR++  ++N++N  T GF+   +        +          +I 
Sbjct: 1   MNGLYIGSMGMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIG 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDF-----ALEGDAWFALESPRGIILTRDGRFKV 108
                V     +++   G+   T +  DF     A    ++F         LTRDG F +
Sbjct: 61  SVDYAVVPAATHVNLVQGNIQMTNSATDFFLDDGAAGTTSFFVTSKNDETFLTRDGSFTL 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
             D  L ++SG + + +                             IA +   +VD    
Sbjct: 121 NSDRYLQTSSGAFVMGENNERIRIPEGAKVAVQADGTLYDEVTQNNIARLQTKTVDAETN 180

Query: 169 --FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
              V+REN   +               VK   LE+SN +   EM  ++   +   +   +
Sbjct: 181 ARLVQRENKSFTLAEGNIANLPNGTGIVKNHMLENSNVDMTKEMADLMTDQKMIQASQRV 240

Query: 227 IDENEKSMLEAIRNI 241
           +   +K   +    I
Sbjct: 241 MTSFDKIYEKEANEI 255


>gi|296274029|ref|YP_003656660.1| fagellar hook-basal body protein [Arcobacter nitrofigilis DSM 7299]
 gi|296098203|gb|ADG94153.1| fagellar hook-basal body protein [Arcobacter nitrofigilis DSM 7299]
          Length = 241

 Score =  102 bits (253), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 47/254 (18%), Positives = 91/254 (35%), Gaps = 27/254 (10%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDIDQKIS 57
           M        AA +    R+ TV++N++N+ T+GF+   +    F+  +     +  +   
Sbjct: 1   MNQGMYPLAAAMVNQINRVDTVSNNLANSRTIGFKQENLAEGTFNNYLLKANLEGKKPEY 60

Query: 58  -------FVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL--ESPRGIILTRDGRFKV 108
                       ++++    G  + TG  LDFAL+    F    +    +  T+DG FK 
Sbjct: 61  INELTNKVPKIDQKFIDSSQGPIVQTGNNLDFALKEPQTFFAVLDQNGNVQYTKDGSFK- 119

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
             DG LV ++G   +                  + +  + +     I    L     +  
Sbjct: 120 NSDGFLVDSNGNNVLSGDGEPIA----------IEDGFKQAIGVFNIDYKNLEKFGDNNY 169

Query: 169 FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228
            ++ E             E+ +   + +G LE SN NS+  M Q+I   + +      I 
Sbjct: 170 KLKDE----QQVAVQVQAEENNENFILQGSLEQSNVNSVMAMVQLIEAQRSYEQAQKGIT 225

Query: 229 ENEKSMLEAIRNIA 242
             +      I+ + 
Sbjct: 226 GIDSMNKTIIQKLG 239


>gi|170288059|ref|YP_001738297.1| hypothetical protein TRQ2_0255 [Thermotoga sp. RQ2]
 gi|170175562|gb|ACB08614.1| protein of unknown function DUF1078 domain protein [Thermotoga sp.
           RQ2]
          Length = 750

 Score =  102 bits (253), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 38/207 (18%), Positives = 68/207 (32%), Gaps = 13/207 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G+      +  +  V +N+SN +TVGF+  +V F  ++               
Sbjct: 1   MMRSLYSGITGLKNFQVAMDVVGNNISNVNTVGFKASRVNFETMLAQTIKAGRSSQENVG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
             +  Q                GSF +TG + D A++GD +F +        TR G F +
Sbjct: 61  GTNPMQIGLGSQVSSIDKIMTQGSFQNTGVKTDLAIQGDGFFIVSDGNAYYYTRAGAFTL 120

Query: 109 TDDGSLV-SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
             +G+L+ +++G       A    +  ++    N      +   G  +      +V    
Sbjct: 121 DSNGNLIQTSTGYKVQGWTAVQDPETGERYIDTNRPIGDLVISAGMTMPAKKTSNVRFEG 180

Query: 168 GFVRRENSGISPNIPPTPLEDLSGVTV 194
                   G               V V
Sbjct: 181 NLNSNVGPGSFTITLTDDSGVDHDVRV 207



 Score = 81.8 bits (200), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 18/125 (14%), Positives = 37/125 (29%), Gaps = 6/125 (4%)

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQK-GKVIATMGLYSVDMSQGFVRRENSGISP 179
                  +    +            G  S     V+  + L   +   G     NS    
Sbjct: 623 NIPWQDGNPMGVLESFAINEQGEIIGTFSNGLTDVLGQIALAVFNNPSGLSEVGNSLYVV 682

Query: 180 NIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
           +      +  +  +     +  G LE SN +   E  +MI   + F +   +I   ++ +
Sbjct: 683 SANSGVPKIGAPGSGGRGILIPGALEMSNVDLAEEFTKMIVAQRGFQANARVITTADQIL 742

Query: 235 LEAIR 239
            E + 
Sbjct: 743 NELVN 747


>gi|23100411|ref|NP_693878.1| flagellar hook-basal body protein [Oceanobacillus iheyensis HTE831]
 gi|22778644|dbj|BAC14912.1| flagellar hook-basal body protein [Oceanobacillus iheyensis HTE831]
          Length = 276

 Score =  102 bits (253), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 44/277 (15%), Positives = 88/277 (31%), Gaps = 35/277 (12%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M             L+ +L  + +NM+N+ T G+++ + +FS ++    N++        
Sbjct: 1   MSQMMIQAAVTMNQLQNKLDLIGNNMANSQTTGYKSRQAEFSSLLTQQVNNLTDPANAQG 60

Query: 56  ---------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL-----ESPRGIILT 101
                     S    G   ++   G+   T  +LD AL  +              G   T
Sbjct: 61  RLTPDGIRVGSGSRLGSTNMNLNQGAIQETNRDLDVALTSENLLFQVEVTENGQVGTRYT 120

Query: 102 RDGRFKVTDD---GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158
           RDG F ++       ++S S   PV+      +     D I        + ++    A  
Sbjct: 121 RDGSFYLSPMENGQMMLSTSDGNPVIGNNGPILIQDGFDSIEINEYGQLLVERNGQQAIE 180

Query: 159 GLYSV------------DMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANS 206
              SV              +   +    +            +     ++   LE SN + 
Sbjct: 181 DQLSVVEAIRPRLLESTGQNLFQLPNLEALGFNAEEIIQETNPQTAILQSKALEQSNVDI 240

Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
             EM  ++   + +   +  I   ++ M   +  I S
Sbjct: 241 SKEMSDLLMTQRLYQFNSRTITMGDQMMG-LVNQIRS 276


>gi|2494530|sp|Q56326|FLGE_TREPH RecName: Full=Flagellar hook protein flgE
 gi|439981|gb|AAA73467.1| flagellar hook polypeptide [Treponema phagedenis]
          Length = 463

 Score =  102 bits (253), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 55/139 (39%), Gaps = 12/139 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S   G++     + R+  + +N++N +T GF+  +V F +++    +   +      
Sbjct: 1   MMRSLFSGVSGMQNHQTRMDVIGNNVANVNTTGFKRGRVNFQDLISQQLSGASRPNEEVG 60

Query: 56  -------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                     V           G+  +TG   D A++G+ +F L+       T  G F V
Sbjct: 61  GVNPKEVGLGVMVASIDTVHTQGALQTTGINTDIAIQGNGFFILKDGEKSFYTTAGAFGV 120

Query: 109 TDDGSLVSASGKYPVLDMA 127
             DG+LV+ +    V    
Sbjct: 121 DRDGTLVNPANGMRVQGWM 139



 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 20/162 (12%), Positives = 43/162 (26%), Gaps = 5/162 (3%)

Query: 83  ALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNV 142
           A   +          I L   G  + T       ++ K    D  ++      K +   +
Sbjct: 299 ANPDEGGAPTRHTFNINLGEIGTSRNTITQFAERSTTKAYQQDGYAMGYLENFKIDQSGI 358

Query: 143 GEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRG 197
                 +   + I  + L       G  +   +    +                  +  G
Sbjct: 359 ITGVYSNGASREIGQLALAGFANQGGLEKAGENTYIQSNNSGIANITVSGVMGKGKLIAG 418

Query: 198 FLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            LE SN +   +   MI   + F +    I  ++  +   + 
Sbjct: 419 TLEMSNVDLTDQFTDMIITQRGFQAGAKTIQTSDTMLETVLN 460


>gi|149195335|ref|ZP_01872422.1| flagellar hook protein E [Caminibacter mediatlanticus TB-2]
 gi|149134527|gb|EDM23016.1| flagellar hook protein E [Caminibacter mediatlanticus TB-2]
          Length = 869

 Score =  102 bits (253), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 62/203 (30%), Gaps = 14/203 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G++   A +  +   A+N++N +TVGF+  +  F  ++               
Sbjct: 1   MMRSLWSGVSGLNAHQIAMDVEANNIANVNTVGFKYSRTNFQNLLSQTIKSATAPQGDLG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF--ALESPRGIILTRDGRF 106
             +  Q              + GS  +T    D A+ GD +F  + +  +    TR G F
Sbjct: 61  GKNSLQVGLGATVSSVETMFKQGSIQNTDKNTDMAINGDGFFVVSSDGGKTYRYTRAGDF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
                G+ V  +G      +A                             +      +++
Sbjct: 121 TFDAQGNFVDPNGYIVQGWLADPDTHNIDTATGLKPISIPPGLTTPANPTSKISIKANLN 180

Query: 167 QGFVRRENSGISPNIPPTPLEDL 189
            G    E     P +  T   + 
Sbjct: 181 SGDHIIEKGAARPTVDQTADMNG 203



 Score = 73.0 bits (177), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 11/94 (11%), Positives = 37/94 (39%), Gaps = 5/94 (5%)

Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGI-SPNIPPTPLE----DLSGVTVKRGFLEDSNAN 205
           +   +A + +     ++G +    +   +      P+          +++   LE SN +
Sbjct: 773 RSYSLAQVAIAKFVNNEGLMNEGGTLFSASPNSGDPIVGTAGTGGRGSIQPSALEMSNVD 832

Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
               + Q+I + + F + +  I  +++ +   ++
Sbjct: 833 LSRSLTQLIVIQRGFQANSKTITTSDQMLNTLLQ 866


>gi|15606898|ref|NP_214279.1| flagellar hook protein FlgE [Aquifex aeolicus VF5]
 gi|6225343|sp|O67711|FLGE_AQUAE RecName: Full=Flagellar hook protein flgE
 gi|2984140|gb|AAC07675.1| flagellar hook protein FlgE [Aquifex aeolicus VF5]
          Length = 482

 Score =  101 bits (252), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 41/202 (20%), Positives = 72/202 (35%), Gaps = 16/202 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  SF   +         L   +DN++N +TVGF+  +  F ++V  +   ++       
Sbjct: 1   MLRSFYNAITGMDVSRFALDVTSDNLANANTVGFKKSRPIFQDMVSQVVVGLNTTTGTVK 60

Query: 54  --QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRFKVT 109
                +            +GSF  T    D A+EG A F L          TRDGRF++ 
Sbjct: 61  TTTFGAGAVVDSTQKVWTIGSFKQTEITTDLAIEGKALFILRDVLTNQTYYTRDGRFRIN 120

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169
            +G L++ +G Y      +         ++ ++  + +I  K       G    +     
Sbjct: 121 REGYLINPNGLYVQGFKVNPVTGEVTGTQLEDIRVETQIPPK-----ATGEIYFNPPTNL 175

Query: 170 VRRENSGISPNIPPTPLEDLSG 191
             R         P  PL+  + 
Sbjct: 176 DERAPIIDQTTTPFNPLDSFTY 197



 Score = 61.4 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 14/122 (11%), Positives = 34/122 (27%), Gaps = 4/122 (3%)

Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162
           +          +V+                + +   +  V   GE          + L  
Sbjct: 363 NSYITQHAADFVVTMDQDGYARGELIDLYVLSEDGVVVGVYSNGE----TLPTYRLALAQ 418

Query: 163 VDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222
               +  V++ ++  +    PT L       ++   +E SN +   E   +I   + +  
Sbjct: 419 FTDPEELVKKGSNLYASVKTPTILLPGGSNKIRSAVVEMSNVDIAKEFINLITAQRTYQV 478

Query: 223 IT 224
             
Sbjct: 479 TQ 480


>gi|229029452|ref|ZP_04185535.1| Flagellar basal-body rod protein flgG [Bacillus cereus AH1271]
 gi|228731911|gb|EEL82810.1| Flagellar basal-body rod protein flgG [Bacillus cereus AH1271]
          Length = 257

 Score =  101 bits (252), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 45/255 (17%), Positives = 85/255 (33%), Gaps = 15/255 (5%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53
                IG    +   QR++  ++N++N  T GF+   +        +          +I 
Sbjct: 1   MNGLYIGSMGMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIG 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEG-----DAWFALESPRGIILTRDGRFKV 108
                V     +++   G+   T +  DF L+       ++F         LTRDG F +
Sbjct: 61  STDYAVVPAATHVNLVQGNIQMTNSATDFFLDDGAAGISSFFVTSKNDETFLTRDGSFTL 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
             D  L ++SG + + +                             IA +   +VD    
Sbjct: 121 NSDRYLQTSSGAFVMGENNERIRIPEGAKVAVQADGTLYDEVTQNNIARLQTKTVDTETN 180

Query: 169 --FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
              V+REN   +               VK   LE+SN +   EM  ++   +  ++   +
Sbjct: 181 ARLVQRENKSFALAEGNIADLPNGTGLVKNHMLENSNVDMTKEMADLMTDQKMISASQRI 240

Query: 227 IDENEKSMLEAIRNI 241
           +   +K   +    I
Sbjct: 241 MTSFDKIYEKEANEI 255


>gi|182412238|ref|YP_001817304.1| hypothetical protein Oter_0414 [Opitutus terrae PB90-1]
 gi|177839452|gb|ACB73704.1| protein of unknown function DUF1078 [Opitutus terrae PB90-1]
          Length = 312

 Score =  101 bits (252), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 40/302 (13%), Positives = 82/302 (27%), Gaps = 67/302 (22%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------QKISF 58
              G++A     + L  +  N++N +T  +++    + +                Q  + 
Sbjct: 7   LTSGVSAVRTFSKGLEVIGSNIANVNTTAYKSSSATYGDTFSNTLRAATATDSAVQIGTG 66

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSA 117
           V       +   G  ++TG   D  + G  +F ++   G    TRDG F     G L + 
Sbjct: 67  VQVAGISTNFTQGPLVATGNNNDLGISGRGYFVVQDATGNQFATRDGSFHFDTGGYLKNV 126

Query: 118 SGKYPVLDMASVPI----------------------------------QIPQKDEIFNVG 143
            G   + DM                                        I          
Sbjct: 127 QGYNVLNDMGQPVQVSGLKKTYDATGVHDGYEPAPYSELASVSIGSDGTITAYATDGTSV 186

Query: 144 EKGEISQKGKVIATMGLYSVDMSQG-------------------FVRRENSGISPNIPPT 184
             G                V                         +R+ N+  + +   +
Sbjct: 187 LYGRTYDLADTSVPPAPDPVLDPANPAVNPTRSIGVMSVSDESRLMRQANNLYNFSATGS 246

Query: 185 PLED-------LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
            + D            ++ G LE SN +   +   +I   + F + + LI  ++  + + 
Sbjct: 247 TVADNMEVPGVNGTGKIQTGVLEQSNVDLTDQFSNLITTQRSFQAGSRLITVSDSVLEDI 306

Query: 238 IR 239
           + 
Sbjct: 307 VN 308


>gi|1196326|gb|AAB51418.1| flagellar hook protein [Borrelia burgdorferi]
          Length = 372

 Score =  101 bits (252), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 55/139 (39%), Gaps = 12/139 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++     + R+  V +N++N +T+GF+  +V F +++    +          
Sbjct: 1   MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIGFKKGRVNFQDMISQSISGASRPTDARG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                Q    +           G+F ST    D  + G+ +F L+  + +  TR G F V
Sbjct: 61  GTNPKQVGLGMNVASIDTIHTQGAFQSTQKASDLGVSGNGFFILKEGKNLFYTRAGAFDV 120

Query: 109 TDDGSLVSASGKYPVLDMA 127
             D  LV+ +    +    
Sbjct: 121 DSDRHLVNPANGMRIQGWM 139


>gi|24215548|ref|NP_713029.1| flagellar hook protein FlgE [Leptospira interrogans serovar Lai
           str. 56601]
 gi|45657072|ref|YP_001158.1| flagellar hook protein FlgE [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|24196693|gb|AAN50047.1| flagellar hook protein FlgE [Leptospira interrogans serovar Lai
           str. 56601]
 gi|45600309|gb|AAS69795.1| FlgE [Leptospira interrogans serovar Copenhageni str. Fiocruz
           L1-130]
          Length = 464

 Score =  101 bits (252), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 68/213 (31%), Gaps = 14/213 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-------- 52
           M  S   G++     + R+  + +N+SN +T GF+T +V F +++               
Sbjct: 1   MMRSLYSGVSGLKNHQVRMDVIGNNISNVNTHGFKTERVTFQDMISQELRGASEPKENIG 60

Query: 53  ----DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                Q                GS  +TG   D A+ G+ +F ++       TR G F +
Sbjct: 61  GVNPQQVGLGSLIAAIDKIMTQGSLQTTGKNTDVAISGEGFFIVKDGDKQFYTRAGAFNL 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
             +G  V+ +    V    S       K        +  I              +D    
Sbjct: 121 DKNGYYVNPANGLKVQGWNSRLDDKGNKYINSAASIEDIIIPVYSKEPARATSQIDFKSN 180

Query: 169 FVRRENSGI--SPNIPPTPLEDLSGVTVKRGFL 199
                 +    +     T + +     ++RG +
Sbjct: 181 LNSSAPAVPPDATQEEITAMINDPDPKMRRGHV 213



 Score = 73.7 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 14/122 (11%), Positives = 38/122 (31%), Gaps = 5/122 (4%)

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
              D  ++        +          +   + +A +     +   G  +  ++  S ++
Sbjct: 339 VKQDGYTMGYLESFSIDNSGTITGVFSNGVRQPLARVATAVFNNPAGLDKAGDTMFSYSM 398

Query: 182 PPTPLEDLS-----GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                            +  G LE SN +   +   MI   + F + +  I  +++ + E
Sbjct: 399 NSGEPNIGEAGVQGRGKINAGLLEMSNVDLSDQFTDMIVTQRGFQANSRTITTSDQMIQE 458

Query: 237 AI 238
            +
Sbjct: 459 VL 460


>gi|119503644|ref|ZP_01625727.1| flagellar hook protein [marine gamma proteobacterium HTCC2080]
 gi|119460706|gb|EAW41798.1| flagellar hook protein [marine gamma proteobacterium HTCC2080]
          Length = 410

 Score =  101 bits (252), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 32/130 (24%), Positives = 59/130 (45%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A +  L  +++N++N  TVGF+  + +F+E+  +  +        V   +
Sbjct: 2   AFSTAISGIKAAQANLDVISNNIANASTVGFKASRAQFAEIYASSVSGGSNAGQGVELTE 61

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPV 123
                  GS   TG+ LD A+ G+ +F + +      TR G F+V  DG L + SG    
Sbjct: 62  IRAEFSQGSLDFTGSGLDLAISGNGFFIVSNAGASEYTRAGSFQVDRDGFLTNESGNRLQ 121

Query: 124 LDMASVPIQI 133
               +    I
Sbjct: 122 GYQGNTDGVI 131



 Score = 73.7 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 14/125 (11%), Positives = 36/125 (28%), Gaps = 5/125 (4%)

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
              + D       I  + +          + + + I  + L S   + G      S    
Sbjct: 284 NSAIQDGYGAGQLISFEFDDSGTAFARYTNGQSRAIGQVALASFRNNNGLQPVGGSNYVE 343

Query: 180 NIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
           +                  ++   +E +N +   E+  +I   + F +   +I   +++ 
Sbjct: 344 SFGSGGPNIGVPGNSGRGNIQSSAVEQANVDITQELVNLIVAQRNFQANAQVISTEDQAT 403

Query: 235 LEAIR 239
              I 
Sbjct: 404 QAVIN 408


>gi|219670134|ref|YP_002460569.1| hypothetical protein Dhaf_4124 [Desulfitobacterium hafniense DCB-2]
 gi|219540394|gb|ACL22133.1| protein of unknown function DUF1078 domain protein
           [Desulfitobacterium hafniense DCB-2]
          Length = 426

 Score =  101 bits (251), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 46/139 (33%), Gaps = 12/139 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S    ++     + ++  V +N++N +T GF+  +V FS ++               
Sbjct: 1   MLRSLYSAISGLKNHQIKMDVVGNNIANVNTTGFKRSRVTFSTMLSQTMKGAGSPSANQG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                Q                GS  +TG   D  + G  +F   +   I+  R G F  
Sbjct: 61  GTNPAQVGLGSMVSSIDQIMTTGSSQNTGKSTDAMINGRGFFVFRNAGQIVYGRAGAFSQ 120

Query: 109 TDDGSLVSASGKYPVLDMA 127
             +G L        VL   
Sbjct: 121 DQNGYLTDPGTGAFVLGQM 139



 Score = 76.8 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 14/89 (15%), Positives = 31/89 (34%), Gaps = 5/89 (5%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYE 209
           I  + + +     G     N+  +        +  +  T     +    +E SN +   E
Sbjct: 333 IGQLAIANFANDAGLQNVGNNFYAATNNSGIADIGAAGTAGRGNIIPNSVEMSNVDLSQE 392

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAI 238
              MI   + F + + +I  ++  + E I
Sbjct: 393 FTDMIVTQRGFQANSRVITVSDSLLQELI 421


>gi|229132600|ref|ZP_04261448.1| Flagellar basal-body rod protein flgG [Bacillus cereus BDRD-ST196]
 gi|228650832|gb|EEL06819.1| Flagellar basal-body rod protein flgG [Bacillus cereus BDRD-ST196]
          Length = 257

 Score =  101 bits (251), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 81/255 (31%), Gaps = 15/255 (5%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53
                IG    +   Q ++  ++N++N  T GF+   +        +          +I 
Sbjct: 1   MNGLYIGSMGMMNYMQHINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGATTNIG 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDF-----ALEGDAWFALESPRGIILTRDGRFKV 108
                V     +++   G+   T +  DF     A    ++F         LTRDG F +
Sbjct: 61  SVDYAVVPAATHVNLVQGNVQMTNSATDFFLDDGAAGTSSFFVTSKNDETFLTRDGSFTL 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
             D  L +ASG + + +                             I  +   +VD    
Sbjct: 121 NSDRYLQTASGAFVMGENNERIRIPEGAKVAVQADGTLYDEVTQNNIGRLQTKTVDAETN 180

Query: 169 --FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
              V+REN   +               VK   LE+SN +   EM  ++   +   +   +
Sbjct: 181 ARLVQRENKSFTLAEGNLADLPNGTGIVKNHMLENSNVDMTKEMADLMSSQKMIQASQRI 240

Query: 227 IDENEKSMLEAIRNI 241
           +   +K   +    I
Sbjct: 241 MTSFDKIYEKEANEI 255


>gi|152975186|ref|YP_001374703.1| flagellar basal body rod protein FlgG [Bacillus cereus subsp.
           cytotoxis NVH 391-98]
 gi|152023938|gb|ABS21708.1| flagellar basal body rod protein [Bacillus cytotoxicus NVH 391-98]
          Length = 257

 Score =  101 bits (251), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 80/255 (31%), Gaps = 15/255 (5%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDIDQKISF 58
                IG    +   Q ++  A+N++N  T GF+   +    F         D       
Sbjct: 1   MNGIYIGSMGMMNYIQHINVHANNVANAQTPGFKAENLTSKVFDSQNTYRLGDGPSTSVG 60

Query: 59  VASGKEYLSKEVGSFIS-----TGTELDFALEGDA-----WFALESPRGIILTRDGRFKV 108
                   +    + I      T    DF L+        +F         LTRDG+F +
Sbjct: 61  TTDYAVVPAATHVNLIQGSVQITNRPTDFYLDDGTSGTASFFVTSKGGETFLTRDGQFTI 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM--S 166
            +D  L ++SG Y + +                       +     IA +    V+   +
Sbjct: 121 NEDRYLQTSSGAYVLGENHERIRIPEGTKVKVQEDGMLYDAVSQNHIARLQTKMVNTEVN 180

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
              V+REN   +               V+   LE+SN +   EM  ++   +   +   +
Sbjct: 181 ARLVQRENKSFTLAEGDIADLPNGTGAVRNYMLENSNVDMTKEMADIMTNQKMVQASQRI 240

Query: 227 IDENEKSMLEAIRNI 241
           +   +K   +    I
Sbjct: 241 MTSFDKIYEKEANEI 255


>gi|281411901|ref|YP_003345980.1| fagellar hook-basal body protein [Thermotoga naphthophila RKU-10]
 gi|281373004|gb|ADA66566.1| fagellar hook-basal body protein [Thermotoga naphthophila RKU-10]
          Length = 755

 Score =  101 bits (251), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 38/207 (18%), Positives = 69/207 (33%), Gaps = 13/207 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G+      +  +  V +N+SN +TVGF+  +V F  ++               
Sbjct: 1   MMRSLYSGITGLKNFQVAMDVVGNNISNVNTVGFKASRVNFETMLAQTIKAGRSSQENVG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
             +  Q                GSF +TG + D A++GD +F +        TR G F +
Sbjct: 61  GTNPMQIGLGSQVSSIDKIMTQGSFQNTGVKTDLAIQGDGFFIVSDGSSYYYTRAGAFTL 120

Query: 109 TDDGSLV-SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
             +G+L+ +++G       A    +  ++    N      +   G  +      +V    
Sbjct: 121 DSNGNLIQTSTGYKVQGWTAVQDPETGERYIDTNKPIGDLVISAGMTMPAKKTSNVRFEG 180

Query: 168 GFVRRENSGISPNIPPTPLEDLSGVTV 194
               +   G               V V
Sbjct: 181 NLNSKLGPGSFVITLTDENGINHDVRV 207



 Score = 81.8 bits (200), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 18/125 (14%), Positives = 37/125 (29%), Gaps = 6/125 (4%)

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQK-GKVIATMGLYSVDMSQGFVRRENSGISP 179
                  +    +            G  S     V+  + L   +   G     NS    
Sbjct: 628 NIPWQDGNPMGVLESFAINEQGEIIGTFSNGLTDVLGQIALAVFNNPSGLSEVGNSLYVV 687

Query: 180 NIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
           +      +  +  +     +  G LE SN +   E  +MI   + F +   +I   ++ +
Sbjct: 688 SANSGVPKIGAPGSGGRGILIPGALEMSNVDLAEEFTKMIVAQRGFQANARVITTADQIL 747

Query: 235 LEAIR 239
            E + 
Sbjct: 748 NELVN 752


>gi|269796390|ref|YP_003315845.1| flagellar hook protein FlgE [Sanguibacter keddieii DSM 10542]
 gi|269098575|gb|ACZ23011.1| flagellar hook protein FlgE [Sanguibacter keddieii DSM 10542]
          Length = 394

 Score =  101 bits (251), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 50/138 (36%), Gaps = 12/138 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G++     +  L    +N++N +T GF+  + +F + +  +            
Sbjct: 1   MLRSLFSGISGLRTHQTMLDVTGNNIANVNTTGFKASQTQFKDTLSQVLTNAGGAQGGVG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
             +  Q    V       + + G+   T    D  + GD +F +        TR G F  
Sbjct: 61  GTNPAQVGLGVQLAGVTTNFQQGAAQVTNRSTDMMISGDGFFVVSKNGENFYTRSGAFDF 120

Query: 109 TDDGSLVSASGKYPVLDM 126
             +G+LV+A G       
Sbjct: 121 DANGNLVTAEGALVQGWA 138



 Score = 83.4 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 16/136 (11%), Positives = 37/136 (27%), Gaps = 5/136 (3%)

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
              G     S +    D                       +     +  + L +     G
Sbjct: 256 DVTGFAKLTSIETASKDGQRAGSLQSFTINADGTIIGAFSNGLKSPVGRIALGTFANPVG 315

Query: 169 FVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223
             +   S  +  +                ++  G LE SN +   E   +I   + F + 
Sbjct: 316 LEKAGGSLYTTTVNSGEAAIGTAGTGGRGSLVGGALEMSNVDLSQEFTNLIIAQRGFQAN 375

Query: 224 TTLIDENEKSMLEAIR 239
           + +I  +++ + E + 
Sbjct: 376 SRVITTSDELLQELVN 391


>gi|222100886|ref|YP_002535454.1| hypothetical protein CTN_1912 [Thermotoga neapolitana DSM 4359]
 gi|221573276|gb|ACM24088.1| Putative uncharacterized protein [Thermotoga neapolitana DSM 4359]
          Length = 759

 Score =  101 bits (251), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 38/207 (18%), Positives = 68/207 (32%), Gaps = 13/207 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G+      +  +  V +N+SN +TVGF+  +V F  ++               
Sbjct: 2   MMRSLYSGITGLKNFQVAMDVVGNNISNVNTVGFKASRVNFETMLAQTIKAGRAPQESVG 61

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
             +  Q                GSF +TG + D A++GD +F +        TR G F +
Sbjct: 62  GTNPMQIGLGSQVASIDKIMTQGSFQNTGVKTDLAIQGDGFFIVSDGNAYYYTRAGAFTL 121

Query: 109 TDDGSLV-SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
             +G+L+ +++G       A    +  ++    N      +   G  +      +V    
Sbjct: 122 DSNGNLIQTSTGYKVQGWTAVQDPETGERYIDTNRPIGDLVISAGMTMPAKKTSNVRFEG 181

Query: 168 GFVRRENSGISPNIPPTPLEDLSGVTV 194
                   G               V V
Sbjct: 182 NLNSNVGPGSFTITLTDDSGVDHDVRV 208



 Score = 82.6 bits (202), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 37/125 (29%), Gaps = 6/125 (4%)

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQK-GKVIATMGLYSVDMSQGFVRRENSGISP 179
                  +    +            G  S     V+  + L   +   G +   NS  + 
Sbjct: 632 NIPWQDGNPMGVLESFAINEQGEIIGTFSNGLTDVLGQIALAVFNNPAGLMEVGNSLYAV 691

Query: 180 NIPPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
           +                 T+  G LE SN +   E  +MI   + F +   +I   ++ +
Sbjct: 692 SSNSGVPKIGAPGSGGRGTLIPGALEMSNVDLAEEFTKMIVAQRGFQANARVITTADQIL 751

Query: 235 LEAIR 239
            E + 
Sbjct: 752 NELVN 756


>gi|302389667|ref|YP_003825488.1| fagellar hook-basal body protein [Thermosediminibacter oceani DSM
           16646]
 gi|302200295|gb|ADL07865.1| fagellar hook-basal body protein [Thermosediminibacter oceani DSM
           16646]
          Length = 404

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 66/179 (36%), Gaps = 12/179 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G+      + ++  + +N++N +TVG++  +V F + +               
Sbjct: 1   MMRSMFSGVTGLRNHQIKMDVIGNNIANVNTVGYKKSRVTFQDTLSQTMRGASSAQGNRG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                Q    +            S  +TG   D A+EGD +F L   +G   TR G F  
Sbjct: 61  GTNPMQIGLGMTIAAIDTIHTPTSLEATGNMTDLAIEGDGFFILSDGQGYYYTRAGNFGF 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
            + G+LV+ +  + V+       + PQ  +  N+ +   +  K   I           Q
Sbjct: 121 DEQGNLVNTANGFKVMGWQDSSSKTPQDIKPINIQKGMLMPAKPTDIVVFAKNLNKADQ 179



 Score = 80.7 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 16/122 (13%), Positives = 41/122 (33%), Gaps = 5/122 (4%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             +       +    +          + +   +A + L   +   G ++   +  + +  
Sbjct: 280 YQNGYPAGTLLGISVDSTGTITGVFDNGQTMELAQVALAVFNNPAGLMKAGRNMYTYSNN 339

Query: 183 PTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
               +          T+  G LE SN +   E  QMI   + F + + +I  +++ + E 
Sbjct: 340 SGEPQIGLAGTGGRGTISPGSLEMSNVDLAEEFTQMIITQRGFQANSRVITASDEMLQEL 399

Query: 238 IR 239
           + 
Sbjct: 400 VN 401


>gi|226225729|ref|YP_002759835.1| flagellar hook protein FlgE [Gemmatimonas aurantiaca T-27]
 gi|226088920|dbj|BAH37365.1| flagellar hook protein FlgE [Gemmatimonas aurantiaca T-27]
          Length = 506

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 37/194 (19%), Positives = 69/194 (35%), Gaps = 12/194 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++     + R+  + +N++N +TV F+  +V F E    +            
Sbjct: 1   MLRSLYAGVSGLRNNQVRMDVIGNNIANVNTVAFKAGRVTFKEGFAQLLAGASRPPGDQG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                Q    +  G        G+  +TG   D A++GD++F +        TR G F+V
Sbjct: 61  GINPIQIGLGMQIGSIDQIFNQGNLETTGLNTDIAIQGDSFFVVRKGNQSFYTRAGNFQV 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
              G LVS +  + V        Q+    +   +    ++S        +       +  
Sbjct: 121 DALGQLVSPANGFIVQGRMYENGQLQDGIQDIRLPFGQKVSANPTTDMKLAGNLNASAPV 180

Query: 169 FVRRENSGISPNIP 182
           F    N  +   +P
Sbjct: 181 FQGDFNDPMDRALP 194



 Score = 80.3 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 22/158 (13%), Positives = 51/158 (32%), Gaps = 5/158 (3%)

Query: 87  DAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG 146
           +      +P  I LT  G        +  S++      +  +         + F +    
Sbjct: 346 NFAVPGANPVRIDLTLGGGVNGLTQFASTSSTAVLRDQNGYTAGTLQNFSIDRFGLITGF 405

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLED 201
             +     +A + L   +   G +R  ++    +            + S   +  G LE 
Sbjct: 406 FTNGTTSPLARIVLADFNNPSGLLRIGDNMYQESANSGGAVLGFALEGSQSQMTSGALEM 465

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E   MI   + F +   ++  +++ + E + 
Sbjct: 466 SNVDLAQEFTNMIVAQRGFQANGKVVSTSDEMLQELMT 503


>gi|51598543|ref|YP_072731.1| flagellar hook protein FlgE [Borrelia garinii PBi]
 gi|51573114|gb|AAU07139.1| flagellar hook protein [Borrelia garinii PBi]
          Length = 442

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 55/139 (39%), Gaps = 12/139 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++     + R+  V +N++N +T+GF+  +V F +++    +          
Sbjct: 1   MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIGFKKGRVNFQDMISQSISGASRPTDSRG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                Q    +           G+F ST    D  + G+ +F L+  + +  TR G F V
Sbjct: 61  GTNPKQVGLGMNVATIDTIHTQGAFQSTQKASDLGVSGNGFFILKEGKNLFYTRAGAFDV 120

Query: 109 TDDGSLVSASGKYPVLDMA 127
             D  LV+ +    +    
Sbjct: 121 DSDRHLVNPANGMRIQGWM 139



 Score = 78.4 bits (191), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 46/141 (32%), Gaps = 5/141 (3%)

Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
           G +  +      S+S K  + D   +      + +   V      +   + +  + L S 
Sbjct: 299 GSYTDSITQFADSSSTKAIIQDGYGMGYMENYEIDQNGVIVGIYSNGIRRDLGKIALASF 358

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQ 218
               G  +  ++          +            ++ G LE +N +   +   MI   +
Sbjct: 359 MNPGGLAKSGDTNFVETSNSGQVRIGETGLAGLGDIRSGVLEMANVDLAEQFTDMIVTQR 418

Query: 219 KFNSITTLIDENEKSMLEAIR 239
            F +    I  +++ + E +R
Sbjct: 419 GFQANAKTITTSDQLLQELVR 439


>gi|75762829|ref|ZP_00742649.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
 gi|228900355|ref|ZP_04064584.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis IBL
           4222]
 gi|74489683|gb|EAO53079.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
 gi|228859242|gb|EEN03673.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis IBL
           4222]
          Length = 259

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 45/255 (17%), Positives = 83/255 (32%), Gaps = 15/255 (5%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53
                IG    +   QR++  ++N++N  T GF+   +        +          +I 
Sbjct: 3   MNGLYIGSMGMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIG 62

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDF-----ALEGDAWFALESPRGIILTRDGRFKV 108
                V     +++   G+   T +  DF     A    ++F         LTRDG F +
Sbjct: 63  SVDYAVVPAATHVNLVQGNIQMTNSATDFFLDDGAAGTTSFFVTSKNDETFLTRDGSFTL 122

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
             D  L ++SG + + +                             IA +   +VD    
Sbjct: 123 NSDRYLQTSSGAFVMGENNERIRIPEGAKVAVQADGTLYDEVTQNNIARLQTKTVDAETN 182

Query: 169 --FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
              V+REN   +               VK   LE+SN +   EM  ++   +   +   +
Sbjct: 183 ARLVQRENKSFTLAEGNIANLPNGTGIVKNHMLENSNVDMTKEMADLMTDQKMIQASQRV 242

Query: 227 IDENEKSMLEAIRNI 241
           +   +K   +    I
Sbjct: 243 MTSFDKIYEKEANEI 257


>gi|310659663|ref|YP_003937384.1| flagellar basal body rod protein [Clostridium sticklandii DSM 519]
 gi|308826441|emb|CBH22479.1| putative Flagellar basal body rod protein [Clostridium sticklandii]
          Length = 372

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 42/196 (21%), Positives = 80/196 (40%), Gaps = 5/196 (2%)

Query: 52  IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFKVT 109
           I        + +  ++   G+   T   L  A+EG  +F         I  +R+G F + 
Sbjct: 175 IGTMNGGALADRSMINFNQGNLDPTENPLHVAIEGKGFFKILDMQDNQIKYSRNGGFSIN 234

Query: 110 DDGSLVSASGKYP---VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
            +G LV  SG        +  SVP    + D          +  + + I T+G+ ++  +
Sbjct: 235 PEGILVDYSGNVVLSASDNEISVPEGASKIDIDKFGNIVATVDGEPEEIDTLGVVNIANT 294

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
           +  +++  S ++        E      V +G+LE SN + + EM +MI+L + + S   +
Sbjct: 295 ESMIKQGESYLTMADGIEADEAEFDGQVLQGYLEGSNVDIISEMAEMINLLRGYESGQKV 354

Query: 227 IDENEKSMLEAIRNIA 242
           I   +  M +A   I 
Sbjct: 355 IRSYDDIMSKAANEIG 370



 Score = 71.4 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/199 (13%), Positives = 62/199 (31%), Gaps = 3/199 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M               +R+  +  N++N+ T  F+   +        +   ++   + + 
Sbjct: 1   MFRGIYTATNGMRTDSKRIDVITSNIANSQTTAFKKDVLVTESFPEQLMVKLNGVENNLR 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
             ++ ++ +  +   T   +        +F +E   GI   +  +    ++G L +A   
Sbjct: 61  PTRQLVNVDPPADFQTNDSIVSIEITSGYFRMEDRHGIGYHKSAKITRDEEGYLRTALRD 120

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
                 A     +   +        G I+     I   G   V      +   N+ +   
Sbjct: 121 SDSNTHAKFGAYLLDVNGNPISAPDGAITLLPNGILQAGGQDV---ARVITAVNAQVIGT 177

Query: 181 IPPTPLEDLSGVTVKRGFL 199
           +    L D S +   +G L
Sbjct: 178 MNGGALADRSMINFNQGNL 196


>gi|229178180|ref|ZP_04305551.1| Flagellar basal-body rod protein flgG [Bacillus cereus 172560W]
 gi|228605310|gb|EEK62760.1| Flagellar basal-body rod protein flgG [Bacillus cereus 172560W]
          Length = 257

 Score =  101 bits (250), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 46/255 (18%), Positives = 82/255 (32%), Gaps = 15/255 (5%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53
                IG    +   QR++  ++N++N  T GF+   +        +          +I 
Sbjct: 1   MNGLYIGSMGMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIG 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDF-----ALEGDAWFALESPRGIILTRDGRFKV 108
                V     +++   G+   T +  DF     A    ++F         LTRDG F +
Sbjct: 61  SVDYAVVPAATHVNLVQGNIQMTNSATDFFLDDGAAGTTSFFVTSKNDETFLTRDGSFTL 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
             D  L ++SG Y +                               IA +   +VD    
Sbjct: 121 NSDRYLQTSSGAYVMDVNNERIRIPEGAKVAVQADGTLYDEVTQNNIARLQTKTVDAETN 180

Query: 169 --FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
              V+REN   +               VK   LE+SN +   EM  ++   +   +   +
Sbjct: 181 ARLVQRENKSFTLAEGNIANLPNGTGIVKNHMLENSNVDMTKEMADLMTDQKMIQASQRV 240

Query: 227 IDENEKSMLEAIRNI 241
           +   +K   +    I
Sbjct: 241 MTSFDKIYEKEANEI 255


>gi|312147981|gb|ADQ30640.1| flagellar hook protein FlgE [Borrelia burgdorferi JD1]
          Length = 442

 Score =  101 bits (250), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 55/139 (39%), Gaps = 12/139 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++     + R+  V +N++N +T+GF+  +V F +++    +          
Sbjct: 1   MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIGFKKGRVNFQDMISQSISGASRPTDARG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                Q    +           G+F ST    D  + G+ +F L+  + +  TR G F V
Sbjct: 61  GTNPKQVGLGMNVASIDTIHTQGAFQSTQKASDLGVSGNGFFILKEGKNLFYTRAGAFDV 120

Query: 109 TDDGSLVSASGKYPVLDMA 127
             D  LV+ +    +    
Sbjct: 121 DSDRHLVNPANGMRIQGWM 139



 Score = 78.4 bits (191), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 46/141 (32%), Gaps = 5/141 (3%)

Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
           G +  +      S+S K  + D   +      + +   V      +   + +  + L S 
Sbjct: 299 GSYTDSITQFADSSSTKAIIQDGYGMGYMENYEIDQNGVIVGIYSNGIRRDLGKIALASF 358

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQ 218
               G  +  ++          +            ++ G LE +N +   +   MI   +
Sbjct: 359 INPGGLAKSGDTNFVETSNSGQVRIGETGLAGLGDIRSGVLEMANVDLAEQFTDMIVTQR 418

Query: 219 KFNSITTLIDENEKSMLEAIR 239
            F +    I  +++ + E +R
Sbjct: 419 GFQANAKTITTSDQLLQELVR 439


>gi|323165587|gb|EFZ51374.1| flagellar basal-body rod protein flgG [Shigella sonnei 53G]
          Length = 143

 Score =  101 bits (250), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 49/129 (37%), Gaps = 14/129 (10%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M +S  I      A +  +  +A+N++N  T GF+  +  F +++               
Sbjct: 1   MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q  + V           G+   T    D A++G  +F +  P      TRDG F
Sbjct: 61  TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGSSAYTRDGSF 120

Query: 107 KVTDDGSLV 115
           +V  +G LV
Sbjct: 121 QVDQNGQLV 129


>gi|228945375|ref|ZP_04107730.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|228814347|gb|EEM60613.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
          Length = 257

 Score =  101 bits (250), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/255 (16%), Positives = 85/255 (33%), Gaps = 15/255 (5%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53
                IG    +   QR++  ++N++N  T GF+   +        +          +I 
Sbjct: 1   MNGLYIGSMGMMNYMQRINVHSNNVANAQTAGFKAENMTSKVFDVQDTYRRGDGAVTNIG 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDA-----WFALESPRGIILTRDGRFKV 108
                V     +++   G+   T +  DF L+        +F         LTRDG F +
Sbjct: 61  SVDYAVVPAATHVNLVQGNIQMTNSATDFFLDDGTAGTASFFVTSKNNETFLTRDGSFTL 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV--DMS 166
             D  L + SG + + +                       +     IA +   +V  + +
Sbjct: 121 NSDRYLQTTSGAFVMGENNERIRIPEGAKVAVQADGTLYDAVTQNNIARLQTKTVGAEAN 180

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
              ++REN   +               VK   LE+SN +   EM  ++   +  ++   +
Sbjct: 181 NRLIQRENKSFTLAEGNIADLPNGTGLVKNHMLENSNVDMTKEMADLMTDQRMISASQRV 240

Query: 227 IDENEKSMLEAIRNI 241
           +   +K   +    I
Sbjct: 241 MTSFDKIYEKEANEI 255


>gi|229172418|ref|ZP_04299977.1| Flagellar basal-body rod protein flgG [Bacillus cereus MM3]
 gi|228610889|gb|EEK68152.1| Flagellar basal-body rod protein flgG [Bacillus cereus MM3]
          Length = 257

 Score =  101 bits (250), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 45/255 (17%), Positives = 86/255 (33%), Gaps = 15/255 (5%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53
                IG    +   QR++  ++N++N  T GF+   +        +          +I 
Sbjct: 1   MNGLYIGSMGMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIG 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDA-----WFALESPRGIILTRDGRFKV 108
                V     +++   G+   T +  DF L+        +F         LTRDG F +
Sbjct: 61  SVDYAVVPAATHVNLVQGNIQMTNSATDFFLDDGTAGTASFFVTSKNNETFLTRDGSFTL 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV--DMS 166
             D  L + SG + + +                       +     IA +   +V  + +
Sbjct: 121 NSDRYLQTTSGAFVMGENNERIRIPEGAKVAVQADGTLYDAVTQNNIARLQTKTVGAEAN 180

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
              V+REN   +              TVK   LE+SN +   EM  ++   +  ++   +
Sbjct: 181 NRLVQRENKSFTLAEGNIADLPNGVGTVKNHMLENSNVDMTKEMADLMTDQKMISASQRV 240

Query: 227 IDENEKSMLEAIRNI 241
           +   +K   +    I
Sbjct: 241 MTSFDKIYEKEANEI 255


>gi|229058421|ref|ZP_04196805.1| Flagellar basal-body rod protein flgG [Bacillus cereus AH603]
 gi|228719930|gb|EEL71520.1| Flagellar basal-body rod protein flgG [Bacillus cereus AH603]
          Length = 257

 Score =  101 bits (250), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 81/255 (31%), Gaps = 15/255 (5%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53
                IG    +   Q ++  ++N++N  T GF+   +        +          +I 
Sbjct: 1   MNGLYIGSMGMMNYMQHINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAMTNIG 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDF-----ALEGDAWFALESPRGIILTRDGRFKV 108
                V     +++   G+   T +  DF     A    ++F         LTRDG F +
Sbjct: 61  SVDYAVVPAATHVNLVQGNIQMTNSATDFFLDDGAAGTSSFFVTSKNDETFLTRDGSFTL 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
             D  L +ASG + + +                             I  +   +VD    
Sbjct: 121 NSDRYLQTASGAFVMGENNERIRIPEGAKVAVQADGTLYDEVTQNNIGRLQTKTVDAETN 180

Query: 169 --FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
              V+REN   +               VK   LE+SN +   EM  ++   +   +   +
Sbjct: 181 ARLVQRENKSFTLAEGNLADLPNGTGIVKNHMLENSNVDMTKEMADLMSSQKMIQASQRI 240

Query: 227 IDENEKSMLEAIRNI 241
           +   +K   +    I
Sbjct: 241 MTSFDKIYEKEANEI 255


>gi|228984857|ref|ZP_04145027.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
 gi|228774807|gb|EEM23203.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
          Length = 257

 Score =  101 bits (250), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 45/255 (17%), Positives = 86/255 (33%), Gaps = 15/255 (5%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53
                IG    +   QR++  ++N++N  T GF+   +        +          +I 
Sbjct: 1   MNGLYIGSMGMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVINIG 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDA-----WFALESPRGIILTRDGRFKV 108
                V     +++   G+   T +  DF L+        +F         LTRDG F +
Sbjct: 61  SVDYAVVPAATHVNLVQGNIQMTNSATDFFLDDGTAGTASFFVTSKNNETFLTRDGSFTL 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV--DMS 166
             D  L + SG + + +                       +     IA +   +V  + +
Sbjct: 121 NSDRYLQTTSGAFVMGENNERIRIPEGAKVAVQADGTLYDAVTQNNIARLQTKTVGAEAN 180

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
              V+REN   +              TVK   LE+SN +   EM  ++   +  ++   +
Sbjct: 181 NRLVQRENKSFTLAEGNIADLPNGVGTVKNYMLENSNVDMTKEMADLMTDQKMISASQRV 240

Query: 227 IDENEKSMLEAIRNI 241
           +   +K   +    I
Sbjct: 241 MTSFDKIYEKEANEI 255


>gi|769850|gb|AAA91361.1| flagellar distal rod protein [Borrelia burgdorferi N40]
          Length = 372

 Score =  101 bits (250), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 55/139 (39%), Gaps = 12/139 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++     + R+  V +N++N +T+GF+  +V F +++    +          
Sbjct: 1   MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIGFKKGRVNFQDMISQSISGASRPTDARG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                Q    +           G+F ST    D  + G+ +F L+  + +  TR G F V
Sbjct: 61  GTNPKQVGLGMNVASIDTIHTQGAFQSTQKASDLGVSGNGFFILKEGKNLFYTRAGAFDV 120

Query: 109 TDDGSLVSASGKYPVLDMA 127
             D  LV+ +    +    
Sbjct: 121 DSDRHLVNPANGMRIQGWM 139


>gi|163939582|ref|YP_001644466.1| flagellar basal body rod protein FlgG [Bacillus weihenstephanensis
           KBAB4]
 gi|163861779|gb|ABY42838.1| flagellar basal body rod protein [Bacillus weihenstephanensis
           KBAB4]
          Length = 257

 Score =  101 bits (250), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 83/255 (32%), Gaps = 15/255 (5%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53
                IG    +   Q ++  ++N++N  T GF+   +        +          +I 
Sbjct: 1   MNGLYIGSMGMMNYMQHINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGSATNIG 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDF-----ALEGDAWFALESPRGIILTRDGRFKV 108
                V     +++   G+   T +  DF     A    ++F         LTRDG F +
Sbjct: 61  SVDYAVVPAATHVNLVQGNVQMTNSATDFFLDDGAAGTSSFFVTSKNDETFLTRDGSFTL 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD--MS 166
             D  L +ASG + + +                             IA +   +VD   +
Sbjct: 121 NSDRYLQTASGAFVMGENNERIRIPEGAKVAVQADGTLYDEVTQNNIARLQTKTVDVETN 180

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
              V+REN   +               V+   LE+SN +   EM  ++   +   +   +
Sbjct: 181 ARLVQRENKSFTLAEGNVADLPNGTGAVRNHMLENSNVDMTKEMADLMTNQKMIQASQRI 240

Query: 227 IDENEKSMLEAIRNI 241
           +   +K   +    I
Sbjct: 241 MTSFDKIYEKEANEI 255


>gi|220913724|ref|YP_002489033.1| hypothetical protein Achl_2983 [Arthrobacter chlorophenolicus A6]
 gi|219860602|gb|ACL40944.1| protein of unknown function DUF1078 domain protein [Arthrobacter
           chlorophenolicus A6]
          Length = 390

 Score =  101 bits (250), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 31/138 (22%), Positives = 50/138 (36%), Gaps = 12/138 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK----------- 49
           M  S   G++   A +  L    +N++N +T GF+    +F + +  +            
Sbjct: 1   MLRSLYSGISGLRAHQTMLDVTGNNIANVNTTGFKASATQFQDTLSQMTQAAAAGQDGAA 60

Query: 50  -NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
            ++  Q    V       +   GS  STG   D  + GD +F          TR G F+ 
Sbjct: 61  GSNPAQIGLGVRVAGISTNFGQGSAQSTGRGSDMMISGDGFFITGKGAQNFYTRAGAFEP 120

Query: 109 TDDGSLVSASGKYPVLDM 126
             +G LVS  G       
Sbjct: 121 DSEGRLVSPDGGILQGWT 138



 Score = 77.2 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 31/92 (33%), Gaps = 5/92 (5%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSM 207
           +V+A + L       G  +   S           +          T+  G LE SN +  
Sbjct: 296 EVLARVALARFANPGGLEKAGGSSYVATGNSGAAQVGTPGQAGMGTLATGSLEMSNVDLS 355

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            E   +I   + F +   +I  +++ + E   
Sbjct: 356 QEFTNLIVAQRGFQANARIITTSDEVLQELSN 387


>gi|219684598|ref|ZP_03539541.1| flagellar hook protein FlgE [Borrelia garinii PBr]
 gi|219671960|gb|EED29014.1| flagellar hook protein FlgE [Borrelia garinii PBr]
          Length = 442

 Score =  101 bits (250), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 55/139 (39%), Gaps = 12/139 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++     + R+  V +N++N +T+GF+  +V F +++    +          
Sbjct: 1   MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIGFKKGRVNFQDMISQSISGASRPTDSRG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                Q    +           G+F ST    D  + G+ +F L+  + +  TR G F V
Sbjct: 61  GTNPKQVGLGMNVATIDTIHTQGAFQSTQKASDLGVSGNGFFILKEGKNLFYTRAGAFDV 120

Query: 109 TDDGSLVSASGKYPVLDMA 127
             D  LV+ +    +    
Sbjct: 121 DSDRHLVNPANGMRIQGWM 139



 Score = 78.0 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 46/141 (32%), Gaps = 5/141 (3%)

Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
           G +  +      S+S K  + D   +      + +   V      +   + +  + L S 
Sbjct: 299 GSYTDSITQFADSSSTKAIIQDGYGMGYMENYEIDQNGVIVGVYSNGIRRDLGKIALASF 358

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQ 218
               G  +  ++          +            ++ G LE +N +   +   MI   +
Sbjct: 359 MNPGGLAKSGDTNFVETSNSGQVRIGETGLAGLGDIRSGVLEMANVDLAEQFTDMIVTQR 418

Query: 219 KFNSITTLIDENEKSMLEAIR 239
            F +    I  +++ + E +R
Sbjct: 419 GFQANAKTITTSDQLLQELVR 439


>gi|221636048|ref|YP_002523924.1| flagellar hook protein FlgE [Thermomicrobium roseum DSM 5159]
 gi|221157294|gb|ACM06412.1| flagellar hook protein FlgE [Thermomicrobium roseum DSM 5159]
          Length = 423

 Score =  101 bits (250), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 74/206 (35%), Gaps = 23/206 (11%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S    ++   A +  +  + +N++N +T GF+  +V+F++++  +            
Sbjct: 1   MMRSMFSAISGLRAHQTWMDVIGNNIANVNTTGFKVGRVRFTDILSQLVRGASGPTETRG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                Q       G        G+   TG   D A++GD +F +      + TRDG F +
Sbjct: 61  GINPLQIGLGAVVGAVDTIHTQGALQLTGKPSDLAIQGDGFFVVSDGSQTLYTRDGAFDI 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
             D  LV+ S  + VL             +    G        G +   +G     +   
Sbjct: 121 GSDLRLVNPSNGFYVLG-----------WQADANGNVDTAGPVGPITIPIGQQLDAVPTT 169

Query: 169 FVRRENSGISPNIPPTPLEDLSGVTV 194
            +  + +  +   P      ++ V++
Sbjct: 170 QITVQGNLNANQDPAATPHFVTKVSI 195



 Score = 93.0 bits (229), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 17/93 (18%), Positives = 36/93 (38%), Gaps = 5/93 (5%)

Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLEDSNANS 206
            KV+  + L       G ++   +   P +        P +      +  G+LE SN + 
Sbjct: 328 TKVVGQIALALFTNPGGLMKVGGNAYLPTVNSGEPIVGPADSGGRGKIASGYLEMSNVDL 387

Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             E   MI   + F + + +I  +++ + E + 
Sbjct: 388 AQEFTSMIMAQRGFQANSRVITTSDEVLQELVN 420


>gi|313901443|ref|ZP_07834901.1| fagellar hook-basal body protein [Thermaerobacter subterraneus DSM
           13965]
 gi|313468293|gb|EFR63749.1| fagellar hook-basal body protein [Thermaerobacter subterraneus DSM
           13965]
          Length = 406

 Score =  101 bits (250), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 14/142 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++     + R+  + +N++N +TVG+++ +V F E+                
Sbjct: 1   MMRSLYAGISGLQNHQLRMDVIGNNIANVNTVGYKSSRVTFKELFNQTLRGASAPAGPAR 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q     A G   +  + G+   TG   D A++GD +F L+    G   TR G F
Sbjct: 61  GGTNPIQIGLGTALGGIDVIHQAGNPQVTGVVTDMAIQGDGFFVLQDATGGYAYTRAGDF 120

Query: 107 KVTDDGSLVSASGKYPVLDMAS 128
           ++  +G LV+A G   +   A 
Sbjct: 121 RLDAEGYLVNADGLRVLGWQAQ 142



 Score = 91.1 bits (224), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 34/93 (36%), Gaps = 4/93 (4%)

Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE----DLSGVTVKRGFLEDSNANS 206
             + IA + L +     G +R  N     N                +V  G LE SN + 
Sbjct: 311 MTQPIAQVALAAFANPAGLLRDGNLYWESNNSGVARIGEAGTGGRGSVTPGALEMSNVDL 370

Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             E   MI   + F + + +I  +++ + E + 
Sbjct: 371 SREFVDMIVTQRGFQANSRVITTSDEMLQELVN 403


>gi|322378470|ref|ZP_08052922.1| flagellar hook protein FlgE [Helicobacter suis HS1]
 gi|321149114|gb|EFX43562.1| flagellar hook protein FlgE [Helicobacter suis HS1]
          Length = 718

 Score =  101 bits (250), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 65/197 (32%), Gaps = 15/197 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G+    A +  L   ++N++N +T GF+  +  F +++  +            
Sbjct: 1   MLRSLWSGVNGMQAHQIALDIESNNIANVNTTGFKYSRASFVDMLSQVKLIATAPYKNGL 60

Query: 49  -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGR 105
              +       V           G+  +T  + D A+EGD +F +   RG+    TR G 
Sbjct: 61  AGQNDFSVGLGVGVDATTKIFSQGNLQNTDVKTDLAIEGDGFFVISPDRGVTRNFTRSGE 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           F    +GSLV+  G      +        +  E   +        +   I    +     
Sbjct: 121 FLFDANGSLVTTGGYVVQGWVRDPKDMGSKDSETDMLKIDNTKPLQNIRIDPGMVMPARS 180

Query: 166 SQGFVRRENSGISPNIP 182
           S     R N     +  
Sbjct: 181 SSKITMRANLNAGRHAD 197



 Score = 69.5 bits (168), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 14/128 (10%), Positives = 36/128 (28%), Gaps = 5/128 (3%)

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           +       +       +  + +   V      + K   +A + L +     G      S 
Sbjct: 588 SETYAIEQNGYQAGDLMDVRFDNDGVLLGSFSNGKTLSLAQVALANFANDAGLQADGGSV 647

Query: 177 ISPNIPPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
            S                    V    LE SN +    +  +I + + F + +  +  ++
Sbjct: 648 FSETSNSGKALIGAANTGRRGGVSGSKLESSNVDLSRSLTNLIVVQRGFQANSKAVTTSD 707

Query: 232 KSMLEAIR 239
           + +   + 
Sbjct: 708 QILNTLLN 715


>gi|116328901|ref|YP_798621.1| flagellar hook protein FlgE [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116330492|ref|YP_800210.1| flagellar hook protein FlgE [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116121645|gb|ABJ79688.1| Endoflagellar hook protein [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116124181|gb|ABJ75452.1| Endoflagellar hook protein [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 464

 Score =  101 bits (250), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 69/213 (32%), Gaps = 14/213 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-------- 52
           M  S   G++     + R+  + +N+SN +T GF+T +V F +++               
Sbjct: 1   MMRSLYSGVSGLKNHQVRMDVIGNNISNVNTHGFKTERVTFQDMISQELRGASEPKENIG 60

Query: 53  ----DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                Q                GS  +TG   D A+ G+ +F ++       TR G F +
Sbjct: 61  GVNPQQVGLGSLIAAIDKIMTQGSLQTTGKNTDVAMSGEGFFIVKDGDKQFYTRAGAFNL 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
             +G  V+ +    V    +       K    +   +  I              +D    
Sbjct: 121 DKNGYYVNPANGLKVQGWNARLDDKGNKFINSSASIEDIIIPVYSKEPARATSQIDFKSN 180

Query: 169 FVRRENSGI--SPNIPPTPLEDLSGVTVKRGFL 199
                 +    +     T + +     ++RG +
Sbjct: 181 LNSSAPAVPPDATQEEITAMINDPDPKMRRGHV 213



 Score = 74.5 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 13/122 (10%), Positives = 38/122 (31%), Gaps = 5/122 (4%)

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
              D  ++        +          +   + +A +     +   G  +  ++  + ++
Sbjct: 339 VKQDGYTMGYLESFSIDNSGTITGVFSNGVRQPLARIATAVFNNPAGLDKAGDTMFAYSM 398

Query: 182 PPTPLEDLS-----GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                            +  G LE SN +   +   MI   + F + +  I  +++ + E
Sbjct: 399 NSGEPNIGEAGVQGRGKINAGLLEMSNVDLSDQFTDMIVTQRGFQANSRTITTSDQMIQE 458

Query: 237 AI 238
            +
Sbjct: 459 VL 460


>gi|32267203|ref|NP_861235.1| flagellar hook protein FlgE [Helicobacter hepaticus ATCC 51449]
 gi|32263256|gb|AAP78301.1| flagellar hook protein FlgE [Helicobacter hepaticus ATCC 51449]
          Length = 718

 Score =  101 bits (250), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 63/179 (35%), Gaps = 15/179 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G++   A +  L   ++N++N +TVGF+  +  F +++  I            
Sbjct: 1   MLRSLWSGVSGMQAHQIALDVESNNIANVNTVGFKYSRASFVDMLSQIKLIATSPYKNGL 60

Query: 49  -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGR 105
              +       V           G+  +T  + D A+EGD +F +   RG     TR+G 
Sbjct: 61  GGQNDFSVGLGVGIDATTKVFSQGNTQNTDVKTDVAIEGDGFFIISPDRGTTHNYTRNGE 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
           F    +G+LV+  G      +                  + + +   + I       + 
Sbjct: 121 FLFDANGNLVTTGGYVVQGWVRPPLEAAESGTMSDFDFFRVDNTGPVRNIQIDPGMVMP 179



 Score = 71.1 bits (172), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 14/128 (10%), Positives = 41/128 (32%), Gaps = 5/128 (3%)

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           +       +       +  + +          + +   +A + L +   + G      + 
Sbjct: 588 SETYSINQNGYQAGDLMDIRFDSNGSLLGAFSNGRSIALAQVALANFANNAGLQAEGGNV 647

Query: 177 ISPNIPPTPLEDLSGVTVKRG-----FLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
            S           +  T +RG      LE SN +    + Q+I + + F + +  +  ++
Sbjct: 648 YSQTGNSGEPMVGAANTGRRGGVSGSKLEMSNVDLSRSLTQLIVVQRGFQANSKAVTTSD 707

Query: 232 KSMLEAIR 239
           + +   + 
Sbjct: 708 QILNTLLN 715


>gi|183220587|ref|YP_001838583.1| flagellar hook protein FlgE [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189910695|ref|YP_001962250.1| flagellar hook protein FlgE [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167775371|gb|ABZ93672.1| Endoflagellar hook protein [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167779009|gb|ABZ97307.1| Flagellar hook protein FlgE [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
          Length = 464

 Score =  101 bits (250), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 68/218 (31%), Gaps = 14/218 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++     + R+  + +N+SN +T GF+T +V F +++               
Sbjct: 1   MMRSLYSGVSGLKNHQVRMDVIGNNISNVNTHGFKTERVTFQDMISQELQGASEPNERIG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                Q                G+  +TG   D A+ G+ +F ++       TR G F V
Sbjct: 61  GTNPKQVGLGSLIAAIDKIMTQGALQTTGKNTDLAVSGEGFFVVKDGDKQFYTRAGAFNV 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
             +G  V+ +    V    S   +   K        +  +             +VD    
Sbjct: 121 DKNGFYVNPANGLKVQGWNSRLDESGNKYINSAGSLEDIVIPLYSKEPARATQNVDFQSN 180

Query: 169 FVRRENSGISPNIPPTPLEDLSGVTVKR--GFLEDSNA 204
                 +             ++    ++  G +   N 
Sbjct: 181 LNASVAAVPPDATEEDIQRYINDPDPRQRRGHVTSINV 218



 Score = 73.4 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 15/122 (12%), Positives = 38/122 (31%), Gaps = 5/122 (4%)

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
              D   +        +          +   + +A + L +     G  +  ++  S ++
Sbjct: 339 VKQDGYPMGYMESFSIDNTGTVTGVFSNGVRQPLARVALANFTNPAGLNKEGDTMYSFSL 398

Query: 182 PPTPLEDLS-----GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                            +  G LE SN +   +   MI   + F + +  I  +++ + E
Sbjct: 399 NSGEANIGEAGSQGRGKINAGLLEMSNVDLSDQFTDMIVTQRGFQANSRTIVTSDQMIQE 458

Query: 237 AI 238
            +
Sbjct: 459 VL 460


>gi|219685755|ref|ZP_03540566.1| flagellar hook protein FlgE [Borrelia garinii Far04]
 gi|219672694|gb|EED29722.1| flagellar hook protein FlgE [Borrelia garinii Far04]
          Length = 442

 Score =  101 bits (250), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 55/139 (39%), Gaps = 12/139 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++     + R+  V +N++N +T+GF+  +V F +++    +          
Sbjct: 1   MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIGFKKGRVNFQDMISQSISGASRPTDSRG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                Q    +           G+F ST    D  + G+ +F L+  + +  TR G F V
Sbjct: 61  GTNPKQVGLGMNVATIDTIHTQGAFQSTQKASDLGVSGNGFFILKEGKNLFYTRAGAFDV 120

Query: 109 TDDGSLVSASGKYPVLDMA 127
             D  LV+ +    +    
Sbjct: 121 DSDRHLVNPANGMRIQGWM 139



 Score = 78.0 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 46/141 (32%), Gaps = 5/141 (3%)

Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
           G +  +      S+S K  + D   +      + +   V      +   + +  + L S 
Sbjct: 299 GSYTDSITQFADSSSTKAIIQDGYGMGYMENYEIDQNGVIVGVYSNGIRRDLGKIALASF 358

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQ 218
               G  +  ++          +            ++ G LE +N +   +   MI   +
Sbjct: 359 MNPGGLAKSGDTNFVETSNSGQVRIGETGLAGLGDIRSGVLEMANVDLAEQFTDMIVTQR 418

Query: 219 KFNSITTLIDENEKSMLEAIR 239
            F +    I  +++ + E +R
Sbjct: 419 GFQANAKTITTSDQLLQELVR 439


>gi|224533123|ref|ZP_03673723.1| flagellar hook protein FlgE [Borrelia burgdorferi WI91-23]
 gi|224511850|gb|EEF82251.1| flagellar hook protein FlgE [Borrelia burgdorferi WI91-23]
 gi|312149691|gb|ADQ29762.1| flagellar hook protein FlgE [Borrelia burgdorferi N40]
          Length = 442

 Score =  101 bits (250), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 55/139 (39%), Gaps = 12/139 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++     + R+  V +N++N +T+GF+  +V F +++    +          
Sbjct: 1   MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIGFKKGRVNFQDMISQSISGASRPTDARG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                Q    +           G+F ST    D  + G+ +F L+  + +  TR G F V
Sbjct: 61  GTNPKQVGLGMNVASIDTIHTQGAFQSTQKASDLGVSGNGFFILKEGKNLFYTRAGAFDV 120

Query: 109 TDDGSLVSASGKYPVLDMA 127
             D  LV+ +    +    
Sbjct: 121 DSDRHLVNPANGMRIQGWM 139



 Score = 78.4 bits (191), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 46/141 (32%), Gaps = 5/141 (3%)

Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
           G +  +      S+S K  + D   +      + +   V      +   + +  + L S 
Sbjct: 299 GSYTDSITQFADSSSTKAIIQDGYGMGYMENYEIDQNGVIVGIYSNGIRRDLGKIALASF 358

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQ 218
               G  +  ++          +            ++ G LE +N +   +   MI   +
Sbjct: 359 MNPGGLAKSGDTNFVETSNSGQVRIGETGLAGLGDIRSGVLEMANVDLAEQFTDMIVTQR 418

Query: 219 KFNSITTLIDENEKSMLEAIR 239
            F +    I  +++ + E +R
Sbjct: 419 GFQANAKTITTSDQLLQELVR 439


>gi|195941363|ref|ZP_03086745.1| flagellar hook protein FlgE [Borrelia burgdorferi 80a]
 gi|221217779|ref|ZP_03589247.1| flagellar hook protein FlgE [Borrelia burgdorferi 72a]
 gi|224533707|ref|ZP_03674295.1| flagellar hook protein FlgE [Borrelia burgdorferi CA-11.2a]
 gi|225549062|ref|ZP_03770037.1| flagellar hook protein FlgE [Borrelia burgdorferi 94a]
 gi|225550122|ref|ZP_03771082.1| flagellar hook protein FlgE [Borrelia burgdorferi 118a]
 gi|226320584|ref|ZP_03796144.1| flagellar hook protein FlgE [Borrelia burgdorferi 29805]
 gi|221192456|gb|EEE18675.1| flagellar hook protein FlgE [Borrelia burgdorferi 72a]
 gi|224513000|gb|EEF83363.1| flagellar hook protein FlgE [Borrelia burgdorferi CA-11.2a]
 gi|225369234|gb|EEG98687.1| flagellar hook protein FlgE [Borrelia burgdorferi 118a]
 gi|225370288|gb|EEG99726.1| flagellar hook protein FlgE [Borrelia burgdorferi 94a]
 gi|226234003|gb|EEH32724.1| flagellar hook protein FlgE [Borrelia burgdorferi 29805]
          Length = 442

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 55/139 (39%), Gaps = 12/139 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++     + R+  V +N++N +T+GF+  +V F +++    +          
Sbjct: 1   MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIGFKKGRVNFQDMISQSISGASRPTDARG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                Q    +           G+F ST    D  + G+ +F L+  + +  TR G F V
Sbjct: 61  GTNPKQVGLGMNVASIDTIHTQGAFQSTQKASDLGVSGNGFFILKEGKNLFYTRAGAFDV 120

Query: 109 TDDGSLVSASGKYPVLDMA 127
             D  LV+ +    +    
Sbjct: 121 DSDRHLVNPANGMRIQGWM 139



 Score = 78.4 bits (191), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 46/141 (32%), Gaps = 5/141 (3%)

Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
           G +  +      S+S K  + D   +      + +   V      +   + +  + L S 
Sbjct: 299 GSYTDSITQFADSSSTKAIIQDGYGMGYMENYEIDQNGVIVGIYSNGIRRDLGKIALASF 358

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQ 218
               G  +  ++          +            ++ G LE +N +   +   MI   +
Sbjct: 359 MNPGGLAKSGDTNFVETSNSGQVRIGETGLAGLGDIRSGVLEMANVDLAEQFTDMIVTQR 418

Query: 219 KFNSITTLIDENEKSMLEAIR 239
            F +    I  +++ + E +R
Sbjct: 419 GFQANAKTITTSDQLLQELVR 439


>gi|229166627|ref|ZP_04294379.1| Flagellar basal-body rod protein flgG [Bacillus cereus AH621]
 gi|228616881|gb|EEK73954.1| Flagellar basal-body rod protein flgG [Bacillus cereus AH621]
          Length = 259

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 45/255 (17%), Positives = 81/255 (31%), Gaps = 15/255 (5%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53
                IG    +   Q ++  ++N++N  T GF+   +        +          +I 
Sbjct: 3   MNGLYIGSMGMMNYMQHINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAMTNIG 62

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDF-----ALEGDAWFALESPRGIILTRDGRFKV 108
                V     +++   G+   T +  DF     A    ++F         LTRDG F +
Sbjct: 63  SVDYAVVPAATHVNLVQGNIQMTNSPTDFFLDDGAAGTSSFFVTSKNDETFLTRDGSFTL 122

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
             D  L +ASG + + +                             IA +   +VD    
Sbjct: 123 NSDRYLQTASGAFVMGENNERIRIPEGAKVAVQADGTLYDEVTQNNIARLQTKTVDTETN 182

Query: 169 --FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
              V+REN                   VK   LE+SN +   EM  ++   +   +   +
Sbjct: 183 ARLVQRENKSFILAEGNIADLPNGTGIVKNHMLENSNVDMTKEMADLMTNQKMIQASQRI 242

Query: 227 IDENEKSMLEAIRNI 241
           +   +K   +    I
Sbjct: 243 MTSFDKIYEKEANEI 257


>gi|226223313|ref|YP_002757420.1| flagellar hook-basal body protein FlgG [Listeria monocytogenes
           Clip81459]
 gi|225875775|emb|CAS04478.1| Putative flagellar hook-basal body protein FlgG [Listeria
           monocytogenes serotype 4b str. CLIP 80459]
          Length = 259

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/251 (17%), Positives = 87/251 (34%), Gaps = 16/251 (6%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV--------VGAIKNDID 53
                IG A  +   Q +   ++N++N  T GF+  ++    +         G +   + 
Sbjct: 1   MKGLYIGAAGMMNYMQHIQVHSNNVANAQTPGFKFDQLTSEVISRNKVNYQNGPVARQVG 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFAL------EGDAWFALESPRGIILTRDGRFK 107
                V     +++   GS   T  + DF +      +G  +F       I L+R G+F 
Sbjct: 61  TIDYGVRPAATHINLTAGSSYITNRDRDFFMQDTDPTQGSNFFITAKNGEISLSRGGQFH 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
               G L +A G   +           +             ++ G+ +  +G   V  +Q
Sbjct: 121 SDQFGFLRTADGANLLSATGEAIQVGQKTSIRAEANGDLYNAETGQYLGRLGTKFVSANQ 180

Query: 168 G--FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225
               V+     I  N   T         ++ G +E SN +   EM Q++   +   +   
Sbjct: 181 ADSLVKDGEGRIHVNGINTMNLPAGQGIIQNGVIETSNVDLGVEMVQLMDNQRMVQASKN 240

Query: 226 LIDENEKSMLE 236
           +++  +K   +
Sbjct: 241 VVNMFDKVYDK 251


>gi|225552055|ref|ZP_03772995.1| flagellar hook protein FlgE [Borrelia sp. SV1]
 gi|225371053|gb|EEH00483.1| flagellar hook protein FlgE [Borrelia sp. SV1]
          Length = 442

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 55/139 (39%), Gaps = 12/139 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++     + R+  V +N++N +T+GF+  +V F +++    +          
Sbjct: 1   MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIGFKKGRVNFQDMISQSISGASRPTDARG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                Q    +           G+F ST    D  + G+ +F L+  + +  TR G F V
Sbjct: 61  GTNPKQVGLGMNVASIDTIHTQGAFQSTQKASDLGVSGNGFFILKEGKNLFYTRAGAFDV 120

Query: 109 TDDGSLVSASGKYPVLDMA 127
             D  LV+ +    +    
Sbjct: 121 DSDRHLVNPANGMRIQGWM 139



 Score = 78.8 bits (192), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 46/141 (32%), Gaps = 5/141 (3%)

Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
           G +  +      S+S K  + D   +      + +   V      +   + +  + L S 
Sbjct: 299 GSYTDSVTQFADSSSTKAIIQDGYGMGYMENYEIDQNGVIVGIYSNGIRRELGKIALASF 358

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQ 218
               G  +  ++          +            ++ G LE +N +   +   MI   +
Sbjct: 359 MNPGGLAKSGDTNFVETSNSGQVRIGETGLAGLGDIRSGVLEMANVDLAEQFTDMIVTQR 418

Query: 219 KFNSITTLIDENEKSMLEAIR 239
            F +    I  +++ + E +R
Sbjct: 419 GFQANAKTITTSDQLLQELVR 439


>gi|216264643|ref|ZP_03436635.1| flagellar hook protein FlgE [Borrelia burgdorferi 156a]
 gi|215981116|gb|EEC21923.1| flagellar hook protein FlgE [Borrelia burgdorferi 156a]
          Length = 442

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 55/139 (39%), Gaps = 12/139 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++     + R+  V +N++N +T+GF+  +V F +++    +          
Sbjct: 1   MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIGFKKGRVNFQDMISQSISGASRPTDARG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                Q    +           G+F ST    D  + G+ +F L+  + +  TR G F V
Sbjct: 61  GTNPKQVGLGMNVASIDTIHTQGAFQSTQKASDLGVSGNGFFILKEGKNLFYTRAGAFDV 120

Query: 109 TDDGSLVSASGKYPVLDMA 127
             D  LV+ +    +    
Sbjct: 121 DSDRHLVNPANGMRIQGWM 139



 Score = 78.4 bits (191), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 46/141 (32%), Gaps = 5/141 (3%)

Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
           G +  +      S+S K  + D   +      + +   V      +   + +  + L S 
Sbjct: 299 GSYTDSITQFADSSSTKAIIQDGYGMGYMENYEIDQNGVIVGIYSNGIRRDLGKIALASF 358

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQ 218
               G  +  ++          +            ++ G LE +N +   +   MI   +
Sbjct: 359 MNPGGLAKSGDTNFVETSNSGQVRIGETGLAGLGDIRSGVLEMANVDLAEQFTDMIVTQR 418

Query: 219 KFNSITTLIDENEKSMLEAIR 239
            F +    I  +++ + E +R
Sbjct: 419 GFQANAKTITTSDQLLQELVR 439


>gi|224437581|ref|ZP_03658537.1| flagellar hook protein FlgE [Helicobacter cinaedi CCUG 18818]
          Length = 718

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 63/179 (35%), Gaps = 15/179 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G++   A +  L   ++N++N +TVGF+  +  F +++  I            
Sbjct: 1   MLRSLWSGVSGMQAHQIALDVESNNIANVNTVGFKYSRASFVDMLSQIKLIATSPYKNGL 60

Query: 49  -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGR 105
              +       V           G+  +T  + D A+EGD +F +   RG     TR+G 
Sbjct: 61  GGQNDFSIGLGVGIDATTKVFSQGNTQNTDVKTDIAIEGDGFFIISPDRGTTHNYTRNGE 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
           F    +G+LV+  G      +                  + + +   + I       + 
Sbjct: 121 FLFDANGNLVTTGGYVVQGWVRPPLEAAESGTMSDFDFFRVDNTGPVRNIQIDPGMVMP 179



 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 14/128 (10%), Positives = 41/128 (32%), Gaps = 5/128 (3%)

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           +       +       +  + +          + +   +A + L +   + G      + 
Sbjct: 588 SETYAINQNGYQAGDLMDIRFDSNGSLLGAFSNGRSIALAQVALANFANNTGLQAEGGNV 647

Query: 177 ISPNIPPTPLEDLSGVTVKRG-----FLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
            S           +  T +RG      LE SN +    + Q+I + + F + +  +  ++
Sbjct: 648 FSQTGNSGEPMIGAANTGRRGGVSGSKLEMSNVDLSRSLTQLIVVQRGFQANSKAVTTSD 707

Query: 232 KSMLEAIR 239
           + +   + 
Sbjct: 708 QILNTLLN 715


>gi|88858143|ref|ZP_01132785.1| flagellar hook protein [Pseudoalteromonas tunicata D2]
 gi|88819760|gb|EAR29573.1| flagellar hook protein [Pseudoalteromonas tunicata D2]
          Length = 492

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 63/170 (37%), Gaps = 5/170 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61
           SFNI L+   A ++ L   A+N++N +T GF+  + +F++V       N   Q    V +
Sbjct: 2   SFNIALSGLKAAQKDLDVTANNIANVNTYGFKESRAEFADVFSTSLFSNAKTQNGEGVLT 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII---LTRDGRFKVTDDGSLVSAS 118
                    GS + T   LD A+ G+ +F             TR G FK+  D  LV+A 
Sbjct: 62  QVVAQQFHQGSLLFTSNALDMAINGNGFFVTTDSPLSRDFTYTRSGAFKLDADNRLVTAG 121

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
           G +      +    +           +   S            S ++   
Sbjct: 122 GDFLQGLPVNEDGSVKSVSLSTTAPIQIPDSAGSPSATGAVDMSFNLDSN 171



 Score = 68.7 bits (166), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 15/98 (15%), Positives = 39/98 (39%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLED 201
             +   + I+ + L      QG  +  N+  +P+           +  +  +++ G LE 
Sbjct: 393 YSNGDAQAISKVALARFPNEQGLTQIGNTSWTPSRESGEALAGEPDSGTFGSIRSGTLEQ 452

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +N N   E+  +I   + F + +  ++ N +     ++
Sbjct: 453 ANVNLTGELVDLIAAQRNFQANSRALEVNNQISQNILQ 490


>gi|218249383|ref|YP_002374806.1| flagellar hook protein FlgE [Borrelia burgdorferi ZS7]
 gi|218164571|gb|ACK74632.1| flagellar hook protein FlgE [Borrelia burgdorferi ZS7]
          Length = 442

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 55/139 (39%), Gaps = 12/139 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++     + R+  V +N++N +T+GF+  +V F +++    +          
Sbjct: 1   MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIGFKKGRVNFQDMISQSISGASRPTDARG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                Q    +           G+F ST    D  + G+ +F L+  + +  TR G F V
Sbjct: 61  GTNPKQVGLGMNVASIDTIHTQGAFQSTQKASDLGVSGNGFFILKEGKNLFYTRAGAFDV 120

Query: 109 TDDGSLVSASGKYPVLDMA 127
             D  LV+ +    +    
Sbjct: 121 DSDRHLVNPANGMRIQGWM 139



 Score = 78.0 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 46/141 (32%), Gaps = 5/141 (3%)

Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
           G +  +      S+S K  + D   +      + +   V      +   + +  + L S 
Sbjct: 299 GSYTDSITQFADSSSTKAIIQDGYGMGYMENYEIDQNGVIVGIYSNGIRRDLGKIALASF 358

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQ 218
               G  +  ++          +            ++ G LE +N +   +   MI   +
Sbjct: 359 MNPGGLAKSGDTNFVETSNSGQVRIGETGLAGLGDIRSGVLEMANVDLAEQFTDMIVTQR 418

Query: 219 KFNSITTLIDENEKSMLEAIR 239
            F +    I  +++ + E +R
Sbjct: 419 GFQANAKTITTSDQLLQELVR 439


>gi|46906933|ref|YP_013322.1| flagellar basal body rod protein FlgG [Listeria monocytogenes
           serotype 4b str. F2365]
 gi|46880199|gb|AAT03499.1| putative flagellar basal-body rod protein [Listeria monocytogenes
           serotype 4b str. F2365]
          Length = 259

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/251 (16%), Positives = 87/251 (34%), Gaps = 16/251 (6%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV--------VGAIKNDID 53
                IG A  +   Q +   ++N++N  T GF+  ++    +         G +   + 
Sbjct: 1   MKGLYIGAAGMMNYMQHIQVHSNNVANAQTPGFKFDQLTSEVISRNKVNYQNGPVARQVG 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFAL------EGDAWFALESPRGIILTRDGRFK 107
                V     +++   GS   T  + DF +      +G  +F       I L+R G+F 
Sbjct: 61  TIDYGVRPAATHINLTAGSSYITNRDRDFFMQDTDPTQGSNFFITAKNGEISLSRGGQFH 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
               G L +A G   +           +             ++ G+ +  +G   V  +Q
Sbjct: 121 SDQFGFLRTADGANLLSATGEAIQVGQKTSIRSEANGDLYNAETGQYLGRLGTKFVSANQ 180

Query: 168 G--FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225
               V+     +  N   T         ++ G +E SN +   EM Q++   +   +   
Sbjct: 181 ADSLVKDGEGRLHVNGINTMNLPAGQGIIQNGVIETSNVDLGVEMVQLMDNQRMVQASKN 240

Query: 226 LIDENEKSMLE 236
           +++  +K   +
Sbjct: 241 VVNMFDKVYDK 251


>gi|15594628|ref|NP_212417.1| flagellar hook protein FlgE [Borrelia burgdorferi B31]
 gi|223889009|ref|ZP_03623600.1| flagellar hook protein FlgE [Borrelia burgdorferi 64b]
 gi|226321601|ref|ZP_03797127.1| flagellar hook protein FlgE [Borrelia burgdorferi Bol26]
 gi|2494528|sp|Q44767|FLGE_BORBU RecName: Full=Flagellar hook protein flgE
 gi|1165267|gb|AAA85606.1| FlgE [Borrelia burgdorferi]
 gi|2688183|gb|AAC66665.1| flagellar hook protein (flgE) [Borrelia burgdorferi B31]
 gi|223885825|gb|EEF56924.1| flagellar hook protein FlgE [Borrelia burgdorferi 64b]
 gi|226232790|gb|EEH31543.1| flagellar hook protein FlgE [Borrelia burgdorferi Bol26]
          Length = 442

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 55/139 (39%), Gaps = 12/139 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++     + R+  V +N++N +T+GF+  +V F +++    +          
Sbjct: 1   MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIGFKKGRVNFQDMISQSISGASRPTDARG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                Q    +           G+F ST    D  + G+ +F L+  + +  TR G F V
Sbjct: 61  GTNPKQVGLGMNVASIDTIHTQGAFQSTQKASDLGVSGNGFFILKEGKNLFYTRAGAFDV 120

Query: 109 TDDGSLVSASGKYPVLDMA 127
             D  LV+ +    +    
Sbjct: 121 DSDRHLVNPANGMRIQGWM 139



 Score = 78.0 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 46/141 (32%), Gaps = 5/141 (3%)

Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
           G +  +      S+S K  + D   +      + +   V      +   + +  + L S 
Sbjct: 299 GSYTDSITQFADSSSTKAIIQDGYGMGYMENYEIDQNGVIVGIYSNGIRRDLGKIALASF 358

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQ 218
               G  +  ++          +            ++ G LE +N +   +   MI   +
Sbjct: 359 MNPGGLAKSGDTNFVETSNSGQVRIGETGLAGLGDIRSGVLEMANVDLAEQFTDMIVTQR 418

Query: 219 KFNSITTLIDENEKSMLEAIR 239
            F +    I  +++ + E +R
Sbjct: 419 GFQANAKTITTSDQLLQELVR 439


>gi|317121822|ref|YP_004101825.1| flagellar hook-basal body protein [Thermaerobacter marianensis DSM
           12885]
 gi|315591802|gb|ADU51098.1| flagellar hook-basal body protein [Thermaerobacter marianensis DSM
           12885]
          Length = 406

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 35/142 (24%), Positives = 59/142 (41%), Gaps = 14/142 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++     + R+  + +N++N +TVGF++ +V F E+                
Sbjct: 1   MMRSLYAGISGLQNHQLRMDVIGNNIANVNTVGFKSSRVTFKELFNQTLRGAAAPAGPTR 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106
                 Q     A     +  + G+   TG   D A++GD +F L+    G   TR G F
Sbjct: 61  GGTNPIQIGLGTALAGIDVIHQPGNPQVTGVATDLAIQGDGFFVLQDAAGGYAYTRAGDF 120

Query: 107 KVTDDGSLVSASGKYPVLDMAS 128
           ++   G LV+A G   +   A 
Sbjct: 121 RLDAAGYLVNADGLRVLGWQAQ 142



 Score = 89.5 bits (220), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 33/92 (35%), Gaps = 4/92 (4%)

Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE----DLSGVTVKRGFLEDSNANSM 207
            + IA + L S     G +R  N     N                 +  G LE SN +  
Sbjct: 312 TQPIAQVALASFANPAGLLRDGNLYWESNNSGVARIGVAGTGGRGALTPGALEMSNVDLS 371

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            E   MI   + F + + +I  +++ + E + 
Sbjct: 372 REFVDMIVTQRGFQANSRVITTSDEMLQELVN 403


>gi|317051681|ref|YP_004112797.1| flagellar hook-basal body protein [Desulfurispirillum indicum S5]
 gi|316946765|gb|ADU66241.1| flagellar hook-basal body protein [Desulfurispirillum indicum S5]
          Length = 1341

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 38/207 (18%), Positives = 71/207 (34%), Gaps = 6/207 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  S   G++  +  ++ +  + +N+SN +T G++  +  F++V+             V 
Sbjct: 1   MLQSMYAGVSGLVNHQRSMDIIGNNISNVNTFGYKKARAGFADVMSISIGGSGVNPMQVG 60

Query: 61  SGKEYLS----KEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVS 116
            G    S       G   ++    D A+ G  +F + +      TR+G F    +G +V+
Sbjct: 61  IGTRVNSTNLIFSQGGIEASNKSTDMAIAGRGFFVVSNGAQNFFTRNGNFTFNKEGMMVT 120

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
             G   V+           +  I      G I     + +     S     G +  E SG
Sbjct: 121 PDG--LVMQGRMATQNQYGEFTINPTTVVGNIQIPVGIKSPASPTSNVELGGNLNAEASG 178

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSN 203
              + P           +   F E  N
Sbjct: 179 TILSTPVLRTAADGNKDLSTLFNEQGN 205



 Score = 73.7 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 18/93 (19%), Positives = 34/93 (36%), Gaps = 5/93 (5%)

Query: 152  GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANS 206
             + +A + L      QG  +  NS              +       T+    LE SN + 
Sbjct: 1246 SRPLAQLTLADFTNPQGLSKVGNSLFVSTNASGQPNYAAPGSAGFGTIISNSLEMSNVDL 1305

Query: 207  MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              E  QMI + + F + + +I  ++  + E + 
Sbjct: 1306 SMEFTQMIIVERGFQANSRIISTSDSMIQEVLN 1338


>gi|152965624|ref|YP_001361408.1| hypothetical protein Krad_1658 [Kineococcus radiotolerans SRS30216]
 gi|151360141|gb|ABS03144.1| protein of unknown function DUF1078 domain protein [Kineococcus
           radiotolerans SRS30216]
          Length = 462

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 34/151 (22%), Positives = 64/151 (42%), Gaps = 12/151 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G++   + +  +  V +N++N +T GF++  V F++ +  +            
Sbjct: 1   MLRSMFSGVSGLRSHQTMMDVVGNNIANVNTAGFKSSSVVFADTLSQLTKAAGAPTDAAA 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
             +  Q    V       +   GS  +TG   D  L+GD  FA++   G   +R+G F +
Sbjct: 61  GTNPAQVGLGVRVNAITQNMTQGSAQATGKSTDLMLQGDGMFAIQQGDGTFYSRNGSFTL 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEI 139
             +GS+V+  G Y +   A     +    +I
Sbjct: 121 DANGSVVTNDGGYVMGWKADAAGAVNTNGQI 151



 Score = 79.9 bits (195), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 43/124 (34%), Gaps = 5/124 (4%)

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
            PV D A +            V      +   + +  + + S + S G  +  NS  S +
Sbjct: 336 NPVADGAPIGTLTGFSFGTDGVITGNYSNGYKQTLGQIAIASFNNSAGLRKEGNSLYSVS 395

Query: 181 IPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
                            ++  G LE SN +   E   +I   + F + + +I  +++ + 
Sbjct: 396 TNSGQPVFGIAGSAGRGSILAGSLEMSNVDLSAEFTNLILAQRGFQANSKVITSSDELLQ 455

Query: 236 EAIR 239
           + + 
Sbjct: 456 DLVN 459


>gi|47091645|ref|ZP_00229441.1| flagellar basal-body rod protein, putative [Listeria monocytogenes
           str. 4b H7858]
 gi|254824038|ref|ZP_05229039.1| flagellar basal body rod protein FlgG [Listeria monocytogenes FSL
           J1-194]
 gi|254932038|ref|ZP_05265397.1| flagellar basal body rod protein FlgG [Listeria monocytogenes
           HPB2262]
 gi|47019964|gb|EAL10701.1| flagellar basal-body rod protein, putative [Listeria monocytogenes
           str. 4b H7858]
 gi|293583591|gb|EFF95623.1| flagellar basal body rod protein FlgG [Listeria monocytogenes
           HPB2262]
 gi|293593267|gb|EFG01028.1| flagellar basal body rod protein FlgG [Listeria monocytogenes FSL
           J1-194]
 gi|328467251|gb|EGF38331.1| flagellar basal body rod protein FlgG [Listeria monocytogenes 1816]
 gi|328475645|gb|EGF46394.1| flagellar basal body rod protein FlgG [Listeria monocytogenes 220]
 gi|332311107|gb|EGJ24202.1| Flagellar basal body rod protein [Listeria monocytogenes str. Scott
           A]
          Length = 259

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/251 (16%), Positives = 87/251 (34%), Gaps = 16/251 (6%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV--------VGAIKNDID 53
                IG A  +   Q +   ++N++N  T GF+  ++    +         G +   + 
Sbjct: 1   MKGLYIGAAGMMNYMQHIQVHSNNVANAQTPGFKFDQLTSEVISRNKVNYQNGPVARQVG 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFAL------EGDAWFALESPRGIILTRDGRFK 107
                V     +++   GS   T  + DF +      +G  +F       I L+R G+F 
Sbjct: 61  TIDYGVRPAATHINLTAGSSYITNRDRDFFMQDTDPTQGSNFFITAKNGEISLSRGGQFH 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
               G L +A G   +           +             ++ G+ +  +G   V  +Q
Sbjct: 121 SDQFGFLRTADGANLLSATGEAIQVGQKTSIRAEANGDLYNAETGQYLGRLGTKFVSANQ 180

Query: 168 G--FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225
               V+     +  N   T         ++ G +E SN +   EM Q++   +   +   
Sbjct: 181 ADSLVKDGEGRLHVNGINTMNLPAGQGIIQNGVIETSNVDLGVEMVQLMDNQRMVQASKN 240

Query: 226 LIDENEKSMLE 236
           +++  +K   +
Sbjct: 241 VVNMFDKVYDK 251


>gi|315452912|ref|YP_004073182.1| flagellar hook protein FlgE [Helicobacter felis ATCC 49179]
 gi|315131964|emb|CBY82592.1| flagellar hook protein FlgE [Helicobacter felis ATCC 49179]
          Length = 718

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 65/197 (32%), Gaps = 15/197 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G+    A +  L   ++N++N +T GF+  +  F +++  +            
Sbjct: 1   MLRSLWSGVNGMQAHQIALDIESNNIANVNTTGFKYSRASFVDMLSQVKLIATAPYKNGL 60

Query: 49  -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGR 105
              +       V           G+  +T  + D A+EGD +F +   RG+    TR G 
Sbjct: 61  AGQNDFSVGLGVGVDATTKIFSQGNLQNTDVKTDLAIEGDGFFVISPDRGVTRNFTRSGE 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           F    +G+LV+  G      +        +  E   +        +   I    +     
Sbjct: 121 FLFDAEGNLVTTGGYVVQGWVRDPKDMGSKGSETDMLKIDNTKPLQNIRIDPGMVMPARS 180

Query: 166 SQGFVRRENSGISPNIP 182
           S     R N     +  
Sbjct: 181 SSKISMRANLNAGRHAE 197



 Score = 71.4 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 15/128 (11%), Positives = 38/128 (29%), Gaps = 5/128 (3%)

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           +       +       +  +            + K   +A + + S     G      S 
Sbjct: 588 SETYAIEQNGYQAGDLMDVRFNGEGALLGSFSNGKTLALAQVAMASFANDAGLQAIGGSV 647

Query: 177 ISPNIPPTPLEDLSGVTVKRGF-----LEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
            S           +  T +RG      LE SN +    +  +I + + F + +  +  ++
Sbjct: 648 FSETGNSGKALIGAANTGRRGAVSGSKLESSNVDLSRSLTNLIVVQRGFQANSKAVTTSD 707

Query: 232 KSMLEAIR 239
           + +   + 
Sbjct: 708 QILNTLLN 715


>gi|116872071|ref|YP_848852.1| flagellar basal body rod protein FlgG [Listeria welshimeri serovar
           6b str. SLCC5334]
 gi|116740949|emb|CAK20069.1| flagellar basal-body rod protein, putative [Listeria welshimeri
           serovar 6b str. SLCC5334]
          Length = 259

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 40/251 (15%), Positives = 83/251 (33%), Gaps = 16/251 (6%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV--------VGAIKNDID 53
                IG A  +   Q +   ++N++N  T GF+  ++    +           +   + 
Sbjct: 1   MKGLYIGAAGMMNYMQHIQVHSNNVANAQTPGFKFDQLTSEVISRNKVNYQNSPVARQVG 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFAL------EGDAWFALESPRGIILTRDGRFK 107
                V     +++   GS   T  + DF +      +G  +F       I L+R G+F 
Sbjct: 61  TIDYGVRPAATHINLTAGSSYITNRDRDFFMQDTNPEQGSNFFLTAKNGEISLSRGGQFH 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
               G L ++ G   +           +             +   + +  +G   V   Q
Sbjct: 121 SDQFGFLRTSDGANVLSATGEAIQVGQKTSIRAEANGDLFNADTNQYLGRIGTKFVSADQ 180

Query: 168 G--FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225
               V+     +  N   T         ++ G LE SN +   EM Q++   +   +   
Sbjct: 181 ADSLVKDGEGRLHVNGINTINLPAGQGNIQNGVLETSNVDLGIEMVQLMDNQRMVQASKN 240

Query: 226 LIDENEKSMLE 236
           +++  +K   +
Sbjct: 241 VVNMFDKVYDK 251


>gi|225181603|ref|ZP_03735044.1| protein of unknown function DUF1078 domain protein [Dethiobacter
           alkaliphilus AHT 1]
 gi|225167711|gb|EEG76521.1| protein of unknown function DUF1078 domain protein [Dethiobacter
           alkaliphilus AHT 1]
          Length = 408

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 56/139 (40%), Gaps = 12/139 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           MQ S   G++     + ++  + +N++N +T  F+  +V+F +++               
Sbjct: 1   MQRSLFTGVSGLRNHQTKMDVIGNNIANVNTTAFKAGRVRFQDILSQNIRGASAPQDGRG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                Q    ++          GS  STG   D A++G  +F +        +RDG F +
Sbjct: 61  GINPAQVGLGMSVASIDTIHTPGSLQSTGRPTDLAIQGSGFFVMSDGANEFYSRDGAFSL 120

Query: 109 TDDGSLVSASGKYPVLDMA 127
             DG LV+ +  +  L   
Sbjct: 121 GSDGDLVNGANGFKPLGWQ 139



 Score = 79.1 bits (193), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 20/141 (14%), Positives = 46/141 (32%), Gaps = 6/141 (4%)

Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-IATMGLYSV 163
                +   +V  S             ++ +          G  +    V +  + L S 
Sbjct: 265 AVDFNNMSQVVGHSNAQVRYQDGFPAGELTEFTIGKTGVISGIYTNGLVVELGQIALASF 324

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLS-----GVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
           D  +G ++   +    +                  ++ G LE SN +  YE  +MI  ++
Sbjct: 325 DNPEGLMKAAGNMYQVSSNSGQARVGGAGLEGRGVIETGTLEMSNVDLSYEFTEMITTSR 384

Query: 219 KFNSITTLIDENEKSMLEAIR 239
            F + + +I  ++  + E + 
Sbjct: 385 GFQANSRVITTSDDLLQEVVN 405


>gi|217965220|ref|YP_002350898.1| flagellar basal body rod protein [Listeria monocytogenes HCC23]
 gi|290893977|ref|ZP_06556952.1| flagellar basal body rod protein FlgG [Listeria monocytogenes FSL
           J2-071]
 gi|217334490|gb|ACK40284.1| flagellar basal body rod protein [Listeria monocytogenes HCC23]
 gi|290556423|gb|EFD89962.1| flagellar basal body rod protein FlgG [Listeria monocytogenes FSL
           J2-071]
 gi|307570221|emb|CAR83400.1| flagellar basal-body rod protein, putative [Listeria monocytogenes
           L99]
          Length = 259

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/251 (16%), Positives = 87/251 (34%), Gaps = 16/251 (6%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV--------VGAIKNDID 53
                IG A  +   Q +   ++N++N  T GF+  ++    +         G +   + 
Sbjct: 1   MKGLYIGAAGMMNYMQHIQVHSNNVANAQTPGFKFDQLTSEVISRNKVNYQNGPVTRQVG 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFAL------EGDAWFALESPRGIILTRDGRFK 107
                V     +++   GS   T  + DF +      +G  +F       I L+R G+F 
Sbjct: 61  TIDYGVRPAATHINLTAGSSYITNRDRDFFMQDTDPTQGSNFFITAKNGEISLSRGGQFH 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
               G L +A G   +           +             ++ G+ +  +G   V  +Q
Sbjct: 121 SDQFGFLRTADGANLLSATGEAIQVGQKTSIRAEANGDLYNAETGQYLGRLGTKFVSANQ 180

Query: 168 G--FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225
               V+     +  N   T         ++ G +E SN +   EM Q++   +   +   
Sbjct: 181 ADSLVKDGEGRLHVNGINTMNLPAGQGIIQNGVIETSNVDLGVEMVQLMDNQRMVQASKN 240

Query: 226 LIDENEKSMLE 236
           +++  +K   +
Sbjct: 241 VVNMFDKVYDK 251


>gi|296126058|ref|YP_003633310.1| fagellar hook-basal body protein [Brachyspira murdochii DSM 12563]
 gi|296017874|gb|ADG71111.1| fagellar hook-basal body protein [Brachyspira murdochii DSM 12563]
          Length = 441

 Score =  100 bits (248), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 33/152 (21%), Positives = 60/152 (39%), Gaps = 12/152 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-------- 52
           M  S   G++     + R+  V +N++N +T GF+  +V F +++    +          
Sbjct: 1   MMRSLFAGVSGLQNHQTRMDVVGNNIANVNTYGFKRGRVTFKDMISQSLSGAAKPQEDRG 60

Query: 53  ----DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                Q    +           G+   TG   D A++G+ +F  +       TR+G F +
Sbjct: 61  GINPQQVGLGMMVATIDTIHTQGALQVTGVNTDLAIQGEGFFIEKRGNNSYYTRNGAFSL 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIF 140
             DG LV+ S  Y V    +V      + E+ 
Sbjct: 121 DRDGYLVNPSIGYKVQGWNAVLNPETGEMELN 152



 Score = 75.3 bits (183), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 17/122 (13%), Positives = 38/122 (31%), Gaps = 5/122 (4%)

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
              D  ++ +      +          +   K +  + L   + + G  +  ++    + 
Sbjct: 316 IEQDGYTMGMLEGFSFDDSGQITGVFTNGNRKTLGQVALAKFNNAGGLEKAGDTLFVASN 375

Query: 182 PPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                           ++K G LE SN +   +   MI   + F S    I   ++ + E
Sbjct: 376 NSGAANIGTAAAEGRGSLKAGALEMSNVDLSEQFTDMIVTQRGFQSNARTITTADQMLQE 435

Query: 237 AI 238
            I
Sbjct: 436 VI 437


>gi|229011065|ref|ZP_04168259.1| Flagellar basal-body rod protein flgG [Bacillus mycoides DSM 2048]
 gi|228750237|gb|EEM00069.1| Flagellar basal-body rod protein flgG [Bacillus mycoides DSM 2048]
          Length = 257

 Score =  100 bits (248), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 83/255 (32%), Gaps = 15/255 (5%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53
                IG    +   Q ++  ++N++N  T GF+   +        +          +I 
Sbjct: 1   MNGLYIGSMGMMNYMQHINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGSATNIG 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDF-----ALEGDAWFALESPRGIILTRDGRFKV 108
                V     +++   G+   T +  DF     A    ++F         LTRDG F +
Sbjct: 61  SVDYAVVPAATHVNLVQGNVQMTNSATDFFLDDGAAGTSSFFVTSKNDERFLTRDGSFTL 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD--MS 166
             D  L +ASG + + +                             IA +   +VD   +
Sbjct: 121 NSDRYLQTASGAFVMGENNERIRIPEGAKVAVQADGTLYDEVTQNNIARLQTKTVDVETN 180

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
              V+REN   +               V+   LE+SN +   EM  ++   +   +   +
Sbjct: 181 ARLVQRENKSFTLAEGNVADLPNGTGAVRNHMLENSNVDMTKEMADLMTNQKMIQASQRI 240

Query: 227 IDENEKSMLEAIRNI 241
           +   +K   +    I
Sbjct: 241 MTSFDKIYEKEANEI 255


>gi|224534234|ref|ZP_03674812.1| flagellar hook protein FlgE [Borrelia spielmanii A14S]
 gi|224514336|gb|EEF84652.1| flagellar hook protein FlgE [Borrelia spielmanii A14S]
          Length = 442

 Score =  100 bits (248), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 55/139 (39%), Gaps = 12/139 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++     + R+  V +N++N +T+GF+  +V F +++    +          
Sbjct: 1   MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIGFKKGRVNFQDMISQSISGASRPTDVRG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                Q    +           G+F ST    D  + G+ +F L+  + +  TR G F V
Sbjct: 61  GTNPKQVGLGMNVAAIDTIHTQGAFQSTQKASDLGVSGNGFFILKEGKNLFYTRAGAFDV 120

Query: 109 TDDGSLVSASGKYPVLDMA 127
             D  LV+ +    +    
Sbjct: 121 DSDRHLVNPANGMRIQGWM 139



 Score = 77.6 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 45/141 (31%), Gaps = 5/141 (3%)

Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
           G +  +      S+S K  + D   +      + +   V      +   + +  + L S 
Sbjct: 299 GSYTDSITQFADSSSTKAIIQDGYGMGYMESYEIDQNGVIVGVYSNGIRRDLGKIALASF 358

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQ 218
               G  +  ++                       ++ G LE +N +   +   MI   +
Sbjct: 359 MNPGGLAKSGDTNFVETSNSGQARIGETGLAGLGDIRSGVLEMANVDLAEQFTDMIVTQR 418

Query: 219 KFNSITTLIDENEKSMLEAIR 239
            F +    I  +++ + E +R
Sbjct: 419 GFQANAKTITTSDQLLQELVR 439


>gi|205373385|ref|ZP_03226189.1| flagellar hook protein FlgE [Bacillus coahuilensis m4-4]
          Length = 426

 Score =  100 bits (248), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 32/145 (22%), Positives = 58/145 (40%), Gaps = 12/145 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S   G++     + +L  + +N++N +T GF+  +V F +++    +          
Sbjct: 1   MLRSMYSGISGMKNAQTKLDVIGNNIANVNTYGFKKGRVTFQDLMNQTMSGATTPTENRG 60

Query: 56  -------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                            +    GS  +TG  LD A+ GD +F + + +  + TR G F +
Sbjct: 61  GQNAKQIGLGGTIASIDIISTQGSLQTTGRSLDVAISGDGYFVVRNGQNEMYTRAGNFYL 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQI 133
             +GSLV  +G       A     I
Sbjct: 121 DSNGSLVDGNGNLIQGYQADANGVI 145



 Score = 78.0 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 37/91 (40%), Gaps = 4/91 (4%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL----SGVTVKRGFLEDSNANSMY 208
           + I+ + + +   + G + +  +  + +                 ++ G LE SN +   
Sbjct: 333 QAISQLVMATFSNAGGLLSQGGNTFTASNNSGLPNYGIANEGRGAIQSGSLEMSNVDLSE 392

Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           E  +MI   + F + T +I  +++ + E + 
Sbjct: 393 EFTEMITAQRSFQANTRIITTSDEILQELVN 423


>gi|300117306|ref|ZP_07055096.1| flagellar basal body rod protein FlgG [Bacillus cereus SJ1]
 gi|298725141|gb|EFI65793.1| flagellar basal body rod protein FlgG [Bacillus cereus SJ1]
          Length = 257

 Score =  100 bits (248), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 86/255 (33%), Gaps = 15/255 (5%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53
                IG    +   QR++  ++N++N  T GF+   +        +          +I 
Sbjct: 1   MNGLYIGSMGMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIG 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDA-----WFALESPRGIILTRDGRFKV 108
                V     +++   G+   T +  DF L+        +F         LTRDG F +
Sbjct: 61  SVDYAVVPAATHVNLVQGNIQMTNSATDFFLDDGTAGTASFFVTSKNNETFLTRDGSFTL 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV--DMS 166
             D  L + SG + + +                       +     IA +   +V  + +
Sbjct: 121 NSDRYLQTTSGAFVMGENNERIRIPEGAKVAVQADGTLYDAVTQNNIARLQTKTVGAEAN 180

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
              ++REN   +              TVK   LE+SN +   EM  ++   +  ++   +
Sbjct: 181 NRLMQRENKSFTLAEGNIADLPNGVGTVKNYMLENSNVDMTKEMADLMTDQKMISASQRV 240

Query: 227 IDENEKSMLEAIRNI 241
           +   +K   +    I
Sbjct: 241 MTSFDKIYEKEANEI 255


>gi|16799765|ref|NP_470033.1| flagellar basal body rod protein FlgG [Listeria innocua Clip11262]
 gi|16413142|emb|CAC95922.1| lin0690 [Listeria innocua Clip11262]
 gi|313620081|gb|EFR91589.1| flagellar basal body rod protein FlgG [Listeria innocua FSL S4-378]
          Length = 259

 Score =  100 bits (248), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 84/251 (33%), Gaps = 16/251 (6%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV--------VGAIKNDID 53
                IG A  +   Q +   ++N++N  T GF+  ++    +           +   + 
Sbjct: 1   MKGLYIGAAGMMNYMQHIQVHSNNVANAQTPGFKFDQLTSEVISRNKVNYQNSPVARQVG 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFAL------EGDAWFALESPRGIILTRDGRFK 107
                V     +++   GS   T  + DF +      +G  +F       I L+R G+F 
Sbjct: 61  TIDYGVRPAATHINLTAGSSYITNRDRDFFMQDTNPEQGSNFFITAKNGEISLSRGGQFH 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
               G L +A G   +           +             ++  + +  +G   V   Q
Sbjct: 121 TDQFGFLRTADGANILSSTGEAIQVGQKTAIRAEANGDLYNAETNQYLGRLGTKFVSADQ 180

Query: 168 --GFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225
               V+     +  N   T         ++ G LE SN +   EM Q++   +   +   
Sbjct: 181 VDSLVKDGEGRLHVNGINTMNLPAGQGNIQNGVLETSNVDLGVEMVQLMDNQRMVQASKN 240

Query: 226 LIDENEKSMLE 236
           +++  +K   +
Sbjct: 241 VVNMFDKVYDK 251


>gi|256833233|ref|YP_003161960.1| hypothetical protein Jden_2019 [Jonesia denitrificans DSM 20603]
 gi|256686764|gb|ACV09657.1| protein of unknown function DUF1078 domain protein [Jonesia
           denitrificans DSM 20603]
          Length = 397

 Score =  100 bits (248), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 52/138 (37%), Gaps = 12/138 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA------------I 48
           M  S   G++   + +  L    +N++N +T G++  + +F + +               
Sbjct: 1   MLRSLFSGISGMRSHQTMLDVTGNNIANVNTTGYKASQTQFKDTLSQMVQNAGAAQGGVG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
             +  Q    V       +   G+  +TG   D  + GD +F ++       TR G F  
Sbjct: 61  GTNPAQVGLGVQVSGITTNFTQGAAQTTGRSTDMMISGDGFFVVQKDGQQFYTRAGAFDF 120

Query: 109 TDDGSLVSASGKYPVLDM 126
             +G+ V+  G Y +   
Sbjct: 121 DSNGNFVTPEGAYVMGWP 138



 Score = 72.6 bits (176), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 12/92 (13%), Positives = 34/92 (36%), Gaps = 5/92 (5%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSM 207
           + +  + L +     G  ++  +    ++     +           +  G LE SN +  
Sbjct: 303 QAVGKISLATFANPAGLEKQGGNLYGTSVNSGDAQVGEPGMGGRGGLVGGALEMSNVDLS 362

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            E   +I   + F + + +I  +++ + E + 
Sbjct: 363 QEFTNLIIAQRGFQANSRVITTSDEVLQELVN 394


>gi|51894131|ref|YP_076822.1| flagellar hook protein [Symbiobacterium thermophilum IAM 14863]
 gi|51857820|dbj|BAD41978.1| flagellar hook protein [Symbiobacterium thermophilum IAM 14863]
          Length = 418

 Score =  100 bits (248), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 38/171 (22%), Positives = 68/171 (39%), Gaps = 7/171 (4%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN------DIDQK 55
             S   G++   + + R+  + +N++N +T GF+  +V F++V     +      +  Q 
Sbjct: 1   MRSLYSGVSGIRSHQTRMDVIGNNIANVNTTGFKASRVTFTDVFNQTLSSGSALTNPQQI 60

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSL 114
              VA G   L  + G+F  TG   D A+ G   F L+ +   I+ +R G F    DG L
Sbjct: 61  GLGVAVGSTDLITDEGAFQMTGRAFDLAISGAGLFVLKGANDEILYSRAGMFDWNPDGIL 120

Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           ++ +    V    +V   I + D       +          AT  +     
Sbjct: 121 INPALGMKVQGWMAVDGVIGRTDRATMQDIQIVRGTVSLPQATTKVTFKGN 171



 Score = 75.3 bits (183), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 24/145 (16%), Positives = 49/145 (33%), Gaps = 7/145 (4%)

Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG--KVIATMG 159
           R         GS  +A     +      P+   +   +  +GE       G  +++A + 
Sbjct: 271 RKITQAYDASGSGGTARSTVELDTRDGRPMGSLEAVYVNELGEIIGRYTNGDSQLLAQIA 330

Query: 160 LYSVDMSQGFVRRENSGISP-NIPPTPL----EDLSGVTVKRGFLEDSNANSMYEMGQMI 214
           L   +   G ++  NS  +       P           T+  G LE SN +   +  +MI
Sbjct: 331 LAHFNNMAGLIKEGNSTFAESPASGVPQIGTAGTGGRGTLVPGNLEGSNVDLAGQFTEMI 390

Query: 215 HLTQKFNSITTLIDENEKSMLEAIR 239
              + + +   ++   +  + E I 
Sbjct: 391 LTQRGYQASARVVSTADDMLQEIIN 415


>gi|187918157|ref|YP_001883720.1| flagellar hook protein FlgE [Borrelia hermsii DAH]
 gi|119861005|gb|AAX16800.1| flagellar hook protein FlgE [Borrelia hermsii DAH]
          Length = 442

 Score =  100 bits (248), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 53/139 (38%), Gaps = 12/139 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++     + R+  V +N++N +T+GF+  +V F +++    +          
Sbjct: 1   MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIGFKKGRVNFQDMISQSISGASRPTDGRG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                Q    ++          GSF ST    D  + G+ +F L        TR G F V
Sbjct: 61  GVNPKQVGLGMSVATIDTIHTQGSFQSTQKASDLGISGNGFFILRDGNNSFYTRAGAFDV 120

Query: 109 TDDGSLVSASGKYPVLDMA 127
             D  LV+ +    +    
Sbjct: 121 DSDRRLVNPANGMKIQGWM 139



 Score = 78.8 bits (192), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 23/166 (13%), Positives = 51/166 (30%), Gaps = 5/166 (3%)

Query: 79  ELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDE 138
             D           +    + L   G +  +      +++ K  V D   +      + +
Sbjct: 274 TFDVVNANAGEVGEQQTVNLRLGNVGSYTDSITQFADASTTKAIVQDGYGMGYMENYEID 333

Query: 139 IFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-----T 193
              V      +   + I  + L S     G  +  ++  S                   T
Sbjct: 334 QNGVITGVYSNGIRRDIGKIALASFVNPGGLAKAGDTNFSETSNSGQARIGETGFAGLGT 393

Query: 194 VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           ++ G LE +N +   +   MI   + F +    I  +++ + E +R
Sbjct: 394 IRAGVLEMANVDLAEQFTDMIVTQRGFQANAKTITTSDQLLQELVR 439


>gi|111115108|ref|YP_709726.1| flagellar hook protein FlgE [Borrelia afzelii PKo]
 gi|216263795|ref|ZP_03435789.1| flagellar hook protein FlgE [Borrelia afzelii ACA-1]
 gi|110890382|gb|ABH01550.1| flagellar hook protein [Borrelia afzelii PKo]
 gi|215979839|gb|EEC20661.1| flagellar hook protein FlgE [Borrelia afzelii ACA-1]
          Length = 442

 Score =   99 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 54/139 (38%), Gaps = 12/139 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++     + R+  V +N++N +T+GF+  +V F +++    +          
Sbjct: 1   MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIGFKKGRVNFQDMISQSISGASRPTDVRG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                Q    +           G+F ST    D  + G+ +F L+    +  TR G F V
Sbjct: 61  GTNPKQVGLGMNVAAIDTIHTQGAFQSTQKASDLGVSGNGFFILKEGGNLFYTRAGAFDV 120

Query: 109 TDDGSLVSASGKYPVLDMA 127
             D  LV+ +    +    
Sbjct: 121 DSDRHLVNPANGMRIQGWM 139



 Score = 77.6 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 14/123 (11%), Positives = 38/123 (30%), Gaps = 5/123 (4%)

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
            + D   +      + +   +      +   + +  + L S     G  +  ++      
Sbjct: 317 IIQDGYGMGYMENYEIDQNGIIVGIYSNGIRRDLGKIALASFMNPGGLAKSGDTNFVETS 376

Query: 182 PPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                            ++ G LE +N +   +   MI   + F +    I  +++ + E
Sbjct: 377 NSGQARIGETGLAGLGDIRSGVLEMANVDLAEQFTDMIVTQRGFQANAKTITTSDQLLQE 436

Query: 237 AIR 239
            +R
Sbjct: 437 LVR 439


>gi|312876506|ref|ZP_07736489.1| fagellar hook-basal body protein [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|311796717|gb|EFR13063.1| fagellar hook-basal body protein [Caldicellulosiruptor
           lactoaceticus 6A]
          Length = 494

 Score =   99 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 66/155 (42%), Gaps = 15/155 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S    ++A  A + R+  + DN++N +TVGF++ +V F+ V  ++            
Sbjct: 1   MMRSMFSSISALRAHQTRMDVIGDNIANVNTVGFKSSRVTFASVFASVLKSASAPDTASG 60

Query: 49  --KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGR 105
              ++  Q    V+     ++   GS   T    D A+EGD +F +    +    TR G 
Sbjct: 61  RGGSNPMQIGLGVSVASVDMNMTRGSLQRTDNPTDLAIEGDGFFVVGGDGKAPRFTRAGN 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF 140
           F +   G+LV+A+G   +  M     +     +  
Sbjct: 121 FSLDKMGNLVTATGLNVLGWMYDPENKQIDTTKSP 155



 Score = 89.5 bits (220), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 29/223 (13%), Positives = 70/223 (31%), Gaps = 23/223 (10%)

Query: 24  DNM--SNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELD 81
           DN+  +NT+ + F   +++F +  G + N   +      S K  +  +  S      +  
Sbjct: 285 DNIEGANTNFIAF--GRIEF-DSKGQVINVQLEGAQNQNSNKFTIKFKNNSLDEITFDTS 341

Query: 82  FALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFN 141
                +     +       +     +        + S +   +D     I +        
Sbjct: 342 IGNTDETLNIFKFDYIKQYSLGSSIRTKKISGYAAGSLQGFNVDATGKIIGVYSN----- 396

Query: 142 VGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKR 196
                      ++I  + + +     G  R  ++           E       S  T+ +
Sbjct: 397 --------GLNQIIGQIAVATFANPAGLQRIGDNLYINTPNSGDPEIGIPGTGSRGTIFQ 448

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G LE SN +   E   MI   + + +   +I  +++ + + + 
Sbjct: 449 GTLEMSNVDLAKEFTDMIVTQRGYQANARVITASDELLQDLVN 491


>gi|224532235|ref|ZP_03672867.1| flagellar hook protein FlgE [Borrelia valaisiana VS116]
 gi|224511700|gb|EEF82106.1| flagellar hook protein FlgE [Borrelia valaisiana VS116]
          Length = 442

 Score =   99 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 55/139 (39%), Gaps = 12/139 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++     + R+  V +N++N +T+GF+  +V F +++    +          
Sbjct: 1   MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIGFKKGRVNFQDMISQSISGASRPTDTRG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                Q    +           G+F ST    D  + G+ +F L+  + +  TR G F V
Sbjct: 61  GTNPKQVGLGMNVAAIDTIHTQGAFQSTQKASDLGVSGNGFFILKEGKNLFYTRAGAFDV 120

Query: 109 TDDGSLVSASGKYPVLDMA 127
             D  LV+ +    +    
Sbjct: 121 DSDRHLVNPANGMRIQGWM 139



 Score = 77.6 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 45/141 (31%), Gaps = 5/141 (3%)

Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
           G +  +      S+S K  + D   +      + +   V      +   + +  + L S 
Sbjct: 299 GSYTDSITQFADSSSTKAIIQDGYGMGYMENYEIDQNGVIVGIYSNGIRRDLGKIALASF 358

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQ 218
               G  +  ++                       ++ G LE +N +   +   MI   +
Sbjct: 359 MNPGGLAKSGDTNFVETSNSGQARIGETGLAGLGDIRSGVLEMANVDLAEQFTDMIVTQR 418

Query: 219 KFNSITTLIDENEKSMLEAIR 239
            F +    I  +++ + E +R
Sbjct: 419 GFQANAKTITTSDQLLQELVR 439


>gi|269792937|ref|YP_003317841.1| hypothetical protein Taci_1328 [Thermanaerovibrio acidaminovorans
           DSM 6589]
 gi|269100572|gb|ACZ19559.1| protein of unknown function DUF1078 domain protein
           [Thermanaerovibrio acidaminovorans DSM 6589]
          Length = 636

 Score =   99 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 50/153 (32%), Gaps = 14/153 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-------- 52
           M  S   G++     +  L  V +N++N +T GF+   V F +++               
Sbjct: 1   MLRSLYSGVSGVKGHQTYLDVVGNNIANVNTTGFKRSNVLFQDLLYQNVRGAMAPDAGQG 60

Query: 53  ------DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106
                  Q       G        G+   TG   DF + GD +F +++      TR G  
Sbjct: 61  RGGINPMQVGLGSMVGAVETIHTQGTMQYTGNRNDFGISGDGYFVVKTGADTFYTRAGSA 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEI 139
            +   G+LV +   Y                 +
Sbjct: 121 TMDSGGNLVMSGMGYIYQGYKMSKDPTDPTKYV 153



 Score = 79.1 bits (193), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 20/136 (14%), Positives = 41/136 (30%), Gaps = 7/136 (5%)

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
           T  GS  +    Y       V        +    G      ++   +  + L      QG
Sbjct: 500 TQYGSAFTTKAYYQDGYPMGVLQDYAVSSDGTVQGVYSNGQRQ--PLYKLALALFANPQG 557

Query: 169 FVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223
             +   +  S +      +     +     +    LE SN +   E   +I   + F + 
Sbjct: 558 LFKESGTVFSQSANSGIAQIVKPMEGGAGRIMGSNLEMSNVDLSQEFVNLIVAQRGFQAN 617

Query: 224 TTLIDENEKSMLEAIR 239
             +I  +++ + E I 
Sbjct: 618 ARVITTSDQVLEELIN 633


>gi|160901599|ref|YP_001567180.1| hypothetical protein Pmob_0108 [Petrotoga mobilis SJ95]
 gi|160359243|gb|ABX30857.1| protein of unknown function DUF1078 domain protein [Petrotoga
           mobilis SJ95]
          Length = 702

 Score =   99 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 35/186 (18%), Positives = 62/186 (33%), Gaps = 12/186 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G+      + +L  VA+N++N +TVG++  +  F   +    +  +       
Sbjct: 1   MLRSMYSGITGLRNFQDQLDIVANNIANVNTVGYKGSRATFQTTLFQTLSAGNAPQNQLG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                Q                GS +STG   D  ++G+ +F L    G   TR G F  
Sbjct: 61  GTNPMQIGLGSQLASIDKLMTQGSPMSTGKATDLMIQGEGFFILSDGIGQYYTRAGNFTR 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
             +G  V  +    +    +   Q   +    N          G+V+A      V ++  
Sbjct: 121 DYNGFFVDPASGMKLQGWTAKIDQEGNRTIDTNDPIGDIQISSGQVMAAKQTSFVRLAHN 180

Query: 169 FVRREN 174
                 
Sbjct: 181 LNAGAG 186



 Score = 79.5 bits (194), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 15/91 (16%), Positives = 31/91 (34%), Gaps = 5/91 (5%)

Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLEDSNANSMY 208
            +  + L + +  +G     NS  + +                 ++  G LE SN +   
Sbjct: 609 PLGQVALATFNNPEGLSATGNSMYAMSSNSGLPQIGVSGVGGRGSINPGALEMSNVDLAE 668

Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           E   MI   + F + +  I   +  + E + 
Sbjct: 669 EFTNMIIAQRGFQANSRSITTADAILNELVN 699


>gi|293115683|ref|ZP_05792615.2| flagellar hook protein FlgE [Butyrivibrio crossotus DSM 2876]
 gi|292808788|gb|EFF67993.1| flagellar hook protein FlgE [Butyrivibrio crossotus DSM 2876]
          Length = 440

 Score =   99 bits (247), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 31/149 (20%), Positives = 55/149 (36%), Gaps = 15/149 (10%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +   G+A     + ++  + +N++N +TVGF++  V FS+V      +     +   
Sbjct: 1   MMRALYSGVAGLKTHQTKMDVIGNNIANVNTVGFKSQSVTFSDVFYQTTQNASGANAETG 60

Query: 61  S---------------GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGR 105
                                  E G   ST    D  + GD+ F + +      T+ G 
Sbjct: 61  MGGTNAKQIGLGSTVSSITTKVSESGGSQSTSNPFDLMINGDSMFIVNNAGTNYFTKAGN 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIP 134
           F V   G+LV++ G       A+    I 
Sbjct: 121 FTVDSAGTLVTSQGYAVQGWKANEEGVIM 149



 Score = 75.7 bits (184), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 15/99 (15%), Positives = 36/99 (36%), Gaps = 6/99 (6%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSG------VTVKRGFLE 200
             +   K+IA + + +     G  +  ++  +  +     + +             G LE
Sbjct: 339 YDNGDSKIIAQIAVANFKNLSGLEKVGDNLFAETLNSGNFDGIGDDITEDGGYFSPGVLE 398

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            SN +   E   MI   + + + + +I  ++  + E I 
Sbjct: 399 MSNVDLAAEFTDMITTQRGYQANSRIITVSDTLLEELIN 437


>gi|121612241|ref|YP_999769.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni 81-176]
 gi|157414368|ref|YP_001481624.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni 81116]
 gi|167004743|ref|ZP_02270501.1| flagellar hook protein flgE [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|87249055|gb|EAQ72017.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni 81-176]
 gi|157385332|gb|ABV51647.1| flagellar hook protein flgE [Campylobacter jejuni subsp. jejuni
           81116]
 gi|307747010|gb|ADN90280.1| Flagellar hook protein [Campylobacter jejuni subsp. jejuni M1]
 gi|315931630|gb|EFV10595.1| flagella basal body rod family protein [Campylobacter jejuni subsp.
           jejuni 327]
          Length = 545

 Score =   99 bits (247), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 43/217 (19%), Positives = 80/217 (36%), Gaps = 9/217 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI----KNDIDQKI 56
           M  SF  G++   +    +   A+N++N +T GF+    +F ++          +  Q  
Sbjct: 1   MMNSFYNGISGVKSNSFGIDITANNIANVNTTGFKYSDAQFKDIFYTTITTQSTNPAQGG 60

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLV 115
               +    +  E GS +++  E D AL+G  +F +    G    TR+G F+   +G LV
Sbjct: 61  YGSGAASSQVVFEQGSPVASDGEFDVALQGKGFFGVLGADGNAYYTRNGSFRRDANGYLV 120

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
            + G + +  M      I   D +  +      +            +   S G    + +
Sbjct: 121 DSYGNFVLGTMNPAFTGINYSDRVAGLMGDYLNTGTPVNNGFTVNSNNSFSIGTTASQGA 180

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQ 212
              P     P +    V    G L   N N+  E+ +
Sbjct: 181 IKVPVNMYLPPQVTQNVK-WSGSL---NTNTTTEVVK 213



 Score = 72.6 bits (176), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 44/124 (35%), Gaps = 7/124 (5%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             D  +                    + K  ++  + LY+    QG V   ++  +    
Sbjct: 419 QQDGVAEGFFEQYNISDDGSIVAQFSNGKNAIVGKLALYNFINEQGLVAMGDNIFAATAN 478

Query: 183 P-------TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
                      + ++    K GFLE SN +   E+  +I   + F++ +  I  +++ + 
Sbjct: 479 SGDASFIMKDGQVVNTAKFKGGFLEQSNVDLSAELSNLIVTQKAFDASSKSITTSDQMIQ 538

Query: 236 EAIR 239
           +AI 
Sbjct: 539 KAIN 542


>gi|86154050|ref|ZP_01072251.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|85842464|gb|EAQ59678.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni HB93-13]
          Length = 545

 Score =   99 bits (247), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 43/217 (19%), Positives = 80/217 (36%), Gaps = 9/217 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI----KNDIDQKI 56
           M  SF  G++   +    +   A+N++N +T GF+    +F ++          +  Q  
Sbjct: 1   MMNSFYNGISGVKSNSFGIDITANNIANVNTTGFKYSDAQFKDIFYTTITTQSTNPAQGG 60

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLV 115
               +    +  E GS +++  E D AL+G  +F +    G    TR+G F+   +G LV
Sbjct: 61  YGSGAASSQVVFEQGSPVASDGEFDVALQGKGFFGVLGADGNAYYTRNGSFRRDANGYLV 120

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
            + G + +  M      I   D +  +      +            +   S G    + +
Sbjct: 121 DSYGNFVLGTMNPAFTGINYSDRVAGLMGDYLNTGTPVNNGFTVNSNNSFSIGTTASQGA 180

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQ 212
              P     P +    V    G L   N N+  E+ +
Sbjct: 181 IKVPVNMYLPPQVTQNVK-WSGSL---NTNTTTEVVK 213



 Score = 72.6 bits (176), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 44/124 (35%), Gaps = 7/124 (5%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             D  +                    + K  ++  + LY+    QG V   ++  +    
Sbjct: 419 QQDGIAEGFFEQYNISDDGSIVAQFSNGKNAIVGKLALYNFINEQGLVAMGDNIFAATAN 478

Query: 183 P-------TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
                      + ++    K GFLE SN +   E+  +I   + F++ +  I  +++ + 
Sbjct: 479 SGDASFIMKDGQVVNTAKFKGGFLEQSNVDLSAELSNLIVTQKAFDASSKSITTSDQMIQ 538

Query: 236 EAIR 239
           +AI 
Sbjct: 539 KAIN 542


>gi|306820921|ref|ZP_07454541.1| flagellar basal body and hook protein [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304551035|gb|EFM39006.1| flagellar basal body and hook protein [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 372

 Score =   99 bits (247), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 42/206 (20%), Positives = 79/206 (38%), Gaps = 8/206 (3%)

Query: 44  VVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG--IILT 101
           +V   +  I    S     +  ++   G+   T   +  +LEG+ +F +       I  +
Sbjct: 166 IVPEARKSIGTINSGNLIDRVMINFNQGAQERTENPMHISLEGNGFFKVRLDSTDAIKYS 225

Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-----EISQKGKVIA 156
           R G F + + G L    G    L      I++P           G         + + IA
Sbjct: 226 RSGVFTLDNSGVLKDFLGNIV-LSEDGSEIKVPTNSRSLEFKSDGSVVSLNSDGQREQIA 284

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
            + L  +   +   +  +S +        +E   G  V +G+LE SN +++ EM  MI +
Sbjct: 285 KLALVDIYNKEDMQKYGHSYMQMTNNAQAIEHPFGGKVLQGYLEKSNVSAIDEMVDMIQM 344

Query: 217 TQKFNSITTLIDENEKSMLEAIRNIA 242
            + F S   +I+  ++ M +A   I 
Sbjct: 345 YRGFESDQKVINAYDQIMQKAANEIG 370



 Score = 67.2 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/201 (13%), Positives = 61/201 (30%), Gaps = 4/201 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M        +A    + ++  +++N+SN DT  F+            +    +    ++ 
Sbjct: 1   MFRGIYTASSAMQTKQNQIEIISNNISNVDTTAFKKDVGVTEAFSEKLLMKRENVEGYLR 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           +    +     +  +   + D  +    +  LE   G    +       D+G L +   +
Sbjct: 61  ANSNNVKVSNKTLKNGLVKTDIEIS-RGYLTLEDKNGKGYYKSASVVRDDEGYLRTVYNE 119

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
           Y   D+      +  ++       +GEI+         G   V      +  E       
Sbjct: 120 YNSNDITKFGAYLLDENSNRINVPEGEITVDNNGNIVSGGRQV---AKLIVPEARKSIGT 176

Query: 181 IPPTPLEDLSGVTVKRGFLED 201
           I    L D   +   +G  E 
Sbjct: 177 INSGNLIDRVMINFNQGAQER 197


>gi|289548122|ref|YP_003473110.1| fagellar hook-basal body protein [Thermocrinis albus DSM 14484]
 gi|289181739|gb|ADC88983.1| fagellar hook-basal body protein [Thermocrinis albus DSM 14484]
          Length = 454

 Score =   99 bits (247), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 38/205 (18%), Positives = 74/205 (36%), Gaps = 17/205 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  SF   +    A    +   +DN++N +T+GF+  +  F +V+ ++   ++       
Sbjct: 1   MLRSFFNAVTGLNAYRTWMDITSDNLANVNTIGFKASRPIFQDVISSVTVGLNTVTNTIK 60

Query: 54  --QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG--IILTRDGRFKVT 109
                + V          +G+F  TG   D A++G   F L+ P       TRDG F+++
Sbjct: 61  TTTYGAGVLIDSTQKIWTIGNFKQTGINTDLAIQGRGLFILKDPISGAHYYTRDGEFRLS 120

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169
            DG +V+++G            ++ +       G +             G+ +       
Sbjct: 121 RDGFMVNSAGLKLQG------FRVDENGRTVGTGLEDIKVVPQLEPKPTGVINFLQPSNL 174

Query: 170 VRRENSGISPNIPPTPLEDLSGVTV 194
                   +P  P  P       T+
Sbjct: 175 NATATEPPNPFNPLDPSSYNYRYTL 199



 Score = 87.6 bits (215), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 18/158 (11%), Positives = 45/158 (28%), Gaps = 4/158 (2%)

Query: 82  FALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFN 141
           + +         +P                  +V+AS              + +   +  
Sbjct: 298 WRIYVGTSLQSGAPNPGQPIPTSFVTQHASDFVVTASQNGYARGDLVDVYVLSEDGAVVG 357

Query: 142 VGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLED 201
           V   G+       +  + +      +  +++  +  +    PT +       V+ G LE 
Sbjct: 358 VYSNGK----SLPLYRVAVAVFSDPEELIKKGANLYTSISTPTVMVPGGAEKVRSGMLEM 413

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E   +I   + + +    I      + E + 
Sbjct: 414 SNVDIATEFVNLISAQRAYQANAKTITATNAVLDETVN 451


>gi|158320521|ref|YP_001513028.1| hypothetical protein Clos_1488 [Alkaliphilus oremlandii OhILAs]
 gi|158140720|gb|ABW19032.1| protein of unknown function DUF1078 domain protein [Alkaliphilus
           oremlandii OhILAs]
          Length = 448

 Score =   99 bits (247), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 30/140 (21%), Positives = 54/140 (38%), Gaps = 16/140 (11%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S    +++  A + ++  + +N++N +TVGF+  +V F EV                
Sbjct: 1   MMRSMYSAVSSLKAHQLKMDVIGNNIANVNTVGFKGTRVTFQEVFSQTLRGAGRAQEGGR 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF---ALESPRGIILTRDG 104
                 Q    +           GS  STG   D  + G+ +F     +       TR G
Sbjct: 61  GGTNPQQVGLGINVNSMDTFHTRGSVESTGYNTDLMINGEGFFVVSDTQGGLQKSYTRAG 120

Query: 105 RFKVTDDGSLVSASGKYPVL 124
            F +  +G+L++  G Y + 
Sbjct: 121 AFGLDANGNLITPDGYYVLG 140



 Score = 86.1 bits (211), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 14/92 (15%), Positives = 35/92 (38%), Gaps = 5/92 (5%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSM 207
           +++  +GL +     G ++   +          +      T     +  G +E SN +  
Sbjct: 354 QILGRVGLANFKNPAGLLKTGGNMYRETSNSGEVMFGYAGTGGFGALNPGAIEMSNVDIS 413

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            E   MI   + F + + +I  +++ + E + 
Sbjct: 414 REFTDMITTQRGFQANSRIITTSDEMLQEIVN 445


>gi|15639714|ref|NP_219164.1| flagellar hook protein FlgE [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189025952|ref|YP_001933724.1| flagellar hook protein FlgE [Treponema pallidum subsp. pallidum
           SS14]
 gi|6015169|sp|O07884|FLGE_TREPA RecName: Full=Flagellar hook protein flgE
 gi|2196893|gb|AAB61251.1| FlgE [Treponema pallidum]
 gi|3323028|gb|AAC65692.1| flagellar hook protein (flgE) [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189018527|gb|ACD71145.1| flagellar hook protein [Treponema pallidum subsp. pallidum SS14]
 gi|291060091|gb|ADD72826.1| flagellar hook protein FlgE [Treponema pallidum subsp. pallidum
           str. Chicago]
          Length = 463

 Score =   99 bits (247), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 58/142 (40%), Gaps = 12/142 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50
           M  S   G++     + R+  + +N++N +T GF+  +V F +++    +          
Sbjct: 1   MMRSLFSGVSGMQNHQTRMDVIGNNVANVNTTGFKRGRVNFQDLISQQLSAAARPNEEVG 60

Query: 51  --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
             +  +    V           G+  +TG   D +++G  +F L+S      TR G F V
Sbjct: 61  GVNPKEVGLGVLIASIDTVHTQGALQTTGINTDVSIQGSGFFVLKSGEKTFFTRAGAFGV 120

Query: 109 TDDGSLVSASGKYPVLDMASVP 130
            + G+LV+ +    V    +  
Sbjct: 121 DNAGTLVNPANGMRVQGWMAQD 142



 Score = 64.5 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/162 (13%), Positives = 44/162 (27%), Gaps = 5/162 (3%)

Query: 83  ALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNV 142
           A   DA         + L   G  + T       ++ K    D  ++      K +   V
Sbjct: 299 ANPDDAGQVTRHAFTLNLGEIGTARNTITQFAERSTTKAYRQDGYAMGYLENFKIDQSGV 358

Query: 143 GEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRG 197
                 +   + I  + L       G  +   +    +                  +  G
Sbjct: 359 ITGVYSNGVSQDIGQLALAGFANQGGLEKAGENTYVQSNNSGIANISTSGVMGKGKLIAG 418

Query: 198 FLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            LE SN +   +   MI   + F +    I  ++  +   + 
Sbjct: 419 TLEMSNVDLTDQFTDMIITQKGFQAGAKTIQTSDTMLDTVLS 460


>gi|227876747|ref|ZP_03994856.1| flagellar hook protein [Mobiluncus mulieris ATCC 35243]
 gi|306817694|ref|ZP_07451436.1| flagellar hook protein FlgE [Mobiluncus mulieris ATCC 35239]
 gi|227842644|gb|EEJ52844.1| flagellar hook protein [Mobiluncus mulieris ATCC 35243]
 gi|304649508|gb|EFM46791.1| flagellar hook protein FlgE [Mobiluncus mulieris ATCC 35239]
          Length = 466

 Score = 99.6 bits (246), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 40/209 (19%), Positives = 77/209 (36%), Gaps = 15/209 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50
           M  S   G++     +  L   ++N++N +T GF++   +F +    +            
Sbjct: 1   MLRSLFTGISGLSVHQTMLDVTSNNIANVNTTGFKSASTRFEDTFSQLVRSGAAPRLNER 60

Query: 51  ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
              +  Q    V       +   G+  +TG  LD  + GD +F L+   G  + TR+G F
Sbjct: 61  GGMNPAQVGLGVKLQSITNNFTGGAAQNTGRNLDTMINGDGFFVLKKTNGTQVYTRNGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
            +   G +V+A G +     A     +    +  N+      S K     T  ++  +M 
Sbjct: 121 GLDAQGQVVAADGSFVQGWKADTKGIVNASGQPGNITLPLTQSMKANPT-TQVIFGGNMP 179

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVK 195
              +  + S  +PN      +    + V 
Sbjct: 180 ADQLYNDPSMQNPNTAGNAKQFAQVLVVH 208



 Score = 74.1 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 14/93 (15%), Positives = 33/93 (35%), Gaps = 5/93 (5%)

Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANS 206
            + +A +   S     G  +   S    +      +     +     +  G +E SN + 
Sbjct: 371 SRALAKIATASFSNPLGLEKAGASYFVESGNSGQPQIGEPGSGTRGAMTGGAIEMSNVDL 430

Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             E   +I   + F + T +I  +++ + E + 
Sbjct: 431 AAEFTNLILSQRGFQANTRVITTSDEILQELVS 463


>gi|153951334|ref|YP_001397315.1| flagellar hook protein [Campylobacter jejuni subsp. doylei 269.97]
 gi|152938780|gb|ABS43521.1| flagellar hook protein [Campylobacter jejuni subsp. doylei 269.97]
          Length = 545

 Score = 99.6 bits (246), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 47/218 (21%), Positives = 83/218 (38%), Gaps = 11/218 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI----KNDIDQKI 56
           M  SF  G++   +    +   A+N++N +T GF+    +F ++          +  Q  
Sbjct: 1   MMNSFYNGISGVKSNSFGIDITANNIANVNTTGFKYSDAQFKDIFYNTITTQSTNPAQGG 60

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLV 115
               +    +  E GS I++  E D AL+G  +F +    G    TR+G FK   +G LV
Sbjct: 61  YGSGAASSQVVFEQGSPIASDGEFDVALQGKGFFGVLEADGNAYYTRNGSFKRDANGYLV 120

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
            + G + +  M  V   +   D +   G  G+    G  +      + +         + 
Sbjct: 121 DSYGNFVLGTMNPVFTGMNYSDRV--AGLMGDYLNTGTPVNNGFTVNSNNPFSIGTTVSQ 178

Query: 176 GISPNIPPTPLEDLSGVTVK-RGFLEDSNANSMYEMGQ 212
           G         L       VK  G L   N N++ E+ +
Sbjct: 179 GAIKVPVNMYLPPQVTQNVKWSGSL---NTNTITEVVK 213



 Score = 72.6 bits (176), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 7/124 (5%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             D  +                    + K  ++  + LY+    QG     ++  +    
Sbjct: 419 QQDGVAEGFFEQYNISDDGSIVAQFSNGKNAIVGKLALYNFINEQGLAAMGDNIFAATAN 478

Query: 183 P-------TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
                      + ++    K GFLE SN +   E+  +I   + F++ +  I  +++ + 
Sbjct: 479 SGDASFIMKDGQVVNTAKFKGGFLEQSNVDLSTELSNLIVTQKAFDASSKSITTSDQMIQ 538

Query: 236 EAIR 239
           +AI 
Sbjct: 539 KAIN 542


>gi|269976274|ref|ZP_06183270.1| flagellar hook protein FlgE [Mobiluncus mulieris 28-1]
 gi|269935603|gb|EEZ92141.1| flagellar hook protein FlgE [Mobiluncus mulieris 28-1]
          Length = 472

 Score = 99.6 bits (246), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 65/169 (38%), Gaps = 14/169 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G++     +  L   ++N++N +T GF++   +F +    +            
Sbjct: 1   MLRSLFTGISGLSVHQTMLDVTSNNIANVNTTGFKSASTRFEDTFSQLVKSGAAPRLNER 60

Query: 49  -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
              +  Q    V       +   G+  +TG  LD  + GD +F L+   G  + TR+G F
Sbjct: 61  GGMNPAQVGLGVKLQSITNNFTGGAAQNTGRNLDTMINGDGFFVLKKTNGTQVYTRNGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI 155
            +   G +V+A G +    MA    +I    +  N+      + +    
Sbjct: 121 GLDAQGQVVAADGSFVQGWMADKKGKISASGQTQNLVLPLTQTFEANPT 169



 Score = 76.4 bits (186), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 42/134 (31%), Gaps = 5/134 (3%)

Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170
            G     S +Y  +D  S         E          +   + +A +   S     G  
Sbjct: 336 TGYAGVNSAQYETIDGNSAGTLTGFGVEADGTIRGTFSNGDTRALAKIATASFSNPLGLE 395

Query: 171 RRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225
           +   S    +      +     +     +  G +E SN +   E   +I   + F + T 
Sbjct: 396 KAGASYFVESGNSGQPQIGEPGSGTRGAMTGGAIEMSNVDLAAEFTNLILSQRGFQANTR 455

Query: 226 LIDENEKSMLEAIR 239
           +I  +++ + E + 
Sbjct: 456 VITTSDEILQELVS 469


>gi|86149558|ref|ZP_01067788.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|85839826|gb|EAQ57085.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni CF93-6]
          Length = 545

 Score = 99.6 bits (246), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 43/217 (19%), Positives = 80/217 (36%), Gaps = 9/217 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI----KNDIDQKI 56
           M  SF  G++   +    +   A+N++N +T GF+    +F ++          +  Q  
Sbjct: 1   MMNSFYNGISGVKSNSFGIDITANNIANVNTTGFKYSDAQFKDIFYTTITTQSTNPAQGG 60

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLV 115
               +    +  E GS +++  E D AL+G  +F +    G    TR+G F+   +G LV
Sbjct: 61  YGSGAASSQVVFEQGSPVASDGEFDVALQGKGFFGVLGADGNAYYTRNGSFRRDANGYLV 120

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
            + G + +  M      I   D +  +      +            +   S G    + +
Sbjct: 121 DSYGNFVLGTMNPAFTGINYSDRVAGLMGDYLNTGTPVNNGFTVNSNNSFSIGTTASQGA 180

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQ 212
              P     P +    V    G L   N N+  E+ +
Sbjct: 181 IKVPVNMYLPPQVTQNVK-WSGSL---NTNTTTEVVK 213



 Score = 72.6 bits (176), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 44/124 (35%), Gaps = 7/124 (5%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             D  +                    + K  ++  + LY+    QG V   ++  +    
Sbjct: 419 QQDGVAEGFFEQYNISDDGSIVAQFSNGKNAIVGKLALYNFINEQGLVAMGDNIFAATAN 478

Query: 183 P-------TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
                      + ++    K GFLE SN +   E+  +I   + F++ +  I  +++ + 
Sbjct: 479 SGDASFIMKDGQVVNTAKFKGGFLEQSNVDLSAELSNLIVTQKAFDASSKSITTSDQMIQ 538

Query: 236 EAIR 239
           +AI 
Sbjct: 539 KAIN 542


>gi|57237057|ref|YP_178069.1| flagellar hook protein [Campylobacter jejuni RM1221]
 gi|88597731|ref|ZP_01100964.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni 84-25]
 gi|205356434|ref|ZP_03223198.1| hypothetical protein Cj8421_0048 [Campylobacter jejuni subsp.
           jejuni CG8421]
 gi|218561735|ref|YP_002343514.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|57165861|gb|AAW34640.1| flagellar hook protein [Campylobacter jejuni RM1221]
 gi|88190035|gb|EAQ94011.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni 84-25]
 gi|112359441|emb|CAL34223.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|205345621|gb|EDZ32260.1| hypothetical protein Cj8421_0048 [Campylobacter jejuni subsp.
           jejuni CG8421]
 gi|315929148|gb|EFV08373.1| flagella basal body rod family protein [Campylobacter jejuni subsp.
           jejuni 305]
          Length = 545

 Score = 99.6 bits (246), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 43/217 (19%), Positives = 80/217 (36%), Gaps = 9/217 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI----KNDIDQKI 56
           M  SF  G++   +    +   A+N++N +T GF+    +F ++          +  Q  
Sbjct: 1   MMNSFYNGISGVKSNSFGIDITANNIANVNTTGFKYSDAQFKDIFYTTITTQSTNPAQGG 60

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLV 115
               +    +  E GS +++  E D AL+G  +F +    G    TR+G F+   +G LV
Sbjct: 61  YGSGAASSQVVFEQGSPVASDGEFDVALQGKGFFGVLGADGNAYYTRNGSFRRDANGYLV 120

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
            + G + +  M      I   D +  +      +            +   S G    + +
Sbjct: 121 DSYGNFVLGTMNPAFTGINYSDRVAGLMGDYLNTGTPVNNGFTVNSNNSFSIGTTASQGA 180

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQ 212
              P     P +    V    G L   N N+  E+ +
Sbjct: 181 IKVPVNMYLPPQVTQNVK-WSGSL---NTNTTTEVVK 213



 Score = 72.6 bits (176), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 44/124 (35%), Gaps = 7/124 (5%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             D  +                    + K  ++  + LY+    QG V   ++  +    
Sbjct: 419 QQDGVAEGFFEQYNISDDGSIVAQFSNGKNAIVGKLALYNFINEQGLVAMGDNIFAATAN 478

Query: 183 P-------TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
                      + ++    K GFLE SN +   E+  +I   + F++ +  I  +++ + 
Sbjct: 479 SGDASFIMKDGQVVNTAKFKGGFLEQSNVDLSAELSNLIVTQKAFDASSKSITTSDQMIQ 538

Query: 236 EAIR 239
           +AI 
Sbjct: 539 KAIN 542


>gi|148926857|ref|ZP_01810535.1| flagellar hook protein flgE [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|145844434|gb|EDK21542.1| flagellar hook protein flgE [Campylobacter jejuni subsp. jejuni
           CG8486]
          Length = 545

 Score = 99.6 bits (246), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 43/217 (19%), Positives = 80/217 (36%), Gaps = 9/217 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI----KNDIDQKI 56
           M  SF  G++   +    +   A+N++N +T GF+    +F ++          +  Q  
Sbjct: 1   MMNSFYNGISGVKSNSFGIDITANNIANVNTTGFKYSDAQFKDIFYTTITTQSTNPAQGG 60

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLV 115
               +    +  E GS +++  E D AL+G  +F +    G    TR+G F+   +G LV
Sbjct: 61  YGSGAASSQVVFEQGSPVASDGEFDVALQGKGFFGVLGADGNAYYTRNGSFRRDANGYLV 120

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
            + G + +  M      I   D +  +      +            +   S G    + +
Sbjct: 121 DSYGNFVLGTMNPAFTGINYSDRVAGLMGDYLNTGTPVNNGFTVNSNNSFSIGTTASQGA 180

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQ 212
              P     P +    V    G L   N N+  E+ +
Sbjct: 181 IKVPVNMYLPPQVTQNVK-WSGSL---NTNTTTEVVK 213



 Score = 72.6 bits (176), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 44/124 (35%), Gaps = 7/124 (5%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             D  +                    + K  ++  + LY+    QG V   ++  +    
Sbjct: 419 QQDGVAEGFFEQYNISDDGSIVAQFSNGKNAIVGKLALYNFINEQGLVAMGDNIFAATAN 478

Query: 183 P-------TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
                      + ++    K GFLE SN +   E+  +I   + F++ +  I  +++ + 
Sbjct: 479 SGDASFIMKDGQVVNTAKFKGGFLEQSNVDLSAELSNLIVTQKAFDASSKSITTSDQMIQ 538

Query: 236 EAIR 239
           +AI 
Sbjct: 539 KAIN 542


>gi|119953082|ref|YP_945291.1| flagellar hook protein FlgE [Borrelia turicatae 91E135]
 gi|119861853|gb|AAX17621.1| flagellar hook protein FlgE [Borrelia turicatae 91E135]
          Length = 442

 Score = 99.6 bits (246), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 53/139 (38%), Gaps = 12/139 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++     + R+  V +N++N +T+GF+  +V F +++    +          
Sbjct: 1   MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIGFKKGRVNFQDMISQSISGASRPTDGRG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                Q    ++          GSF ST    D  + G+ +F L        TR G F V
Sbjct: 61  GVNPKQVGLGMSVATIDTIHTQGSFQSTQKASDLGISGNGFFILRDGNNSFYTRAGAFDV 120

Query: 109 TDDGSLVSASGKYPVLDMA 127
             +  LV+ +    +    
Sbjct: 121 DSNRCLVNPANGMRIQGWM 139



 Score = 78.8 bits (192), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 20/155 (12%), Positives = 50/155 (32%), Gaps = 5/155 (3%)

Query: 90  FALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEIS 149
              +    + L   G +  +      +++ K  + D   +      + +   +      +
Sbjct: 285 VGEQQTINLRLGNVGSYTDSITQFADASTTKAIIQDGYGMGYMENYEIDQNGIIMGVYSN 344

Query: 150 QKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNA 204
              + I  + L S     G  +  ++  S                   T++ G LE +N 
Sbjct: 345 GIRRDIGKIALASFVNPGGLAKVGDTNFSETSNSGQARIGETGLAGLGTIRAGVLEMANV 404

Query: 205 NSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +   +   MI   + F +    I  +++ + E +R
Sbjct: 405 DLAEQFTDMIVTQRGFQANAKTITTSDQLLQELVR 439


>gi|85058012|ref|YP_453714.1| flagellar basal-body rod protein FlgF [Sodalis glossinidius str.
           'morsitans']
 gi|84778532|dbj|BAE73309.1| flagellar basal-body rod protein FlgF [Sodalis glossinidius str.
           'morsitans']
          Length = 252

 Score = 99.6 bits (246), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 45/252 (17%), Positives = 80/252 (31%), Gaps = 15/252 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A  A   + S  A+N++N  T GFR     F      +        + V 
Sbjct: 1   MDRAIYTAMGAASAALTQQSVAANNLANAATTGFRAQLAAFRA--APVNGPTLATRTLVV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDG-----SL 114
                     G    +G  LD AL+   W A+  P  G   TR+GR ++   G     + 
Sbjct: 59  PSVPGNDFSPGPINISGNNLDVALDQHGWLAVRLPDGGEAYTRNGRIEIDSAGGLRVQNY 118

Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174
           +        L +          D   +V   G+  +    I  + L  ++        ++
Sbjct: 119 LLLGADSQPLTVLPGAAVTFGPDGTLSVLGDGDEPKTLVQIGQLKLVRLE-PDSLRHDDS 177

Query: 175 SGI-----SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
                   +       L     + +  G  E SN + +  M +MI   + F     +I  
Sbjct: 178 GLFNLTDTARAQRGAVLPADPTLRLTPGAFEGSNVSPVQTMVEMIGNARSFEMQMKVISN 237

Query: 230 NEKSMLEAIRNI 241
              +   A   +
Sbjct: 238 VNDNA-RAGNQL 248


>gi|213418946|ref|ZP_03352012.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Typhi str. E01-6750]
          Length = 226

 Score = 99.6 bits (246), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 65/230 (28%), Gaps = 15/230 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   +        + V 
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVDGLSLATRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTD------DGS 113
           +         G    T   LD AL+ D W  +++       TR+G  +V         G 
Sbjct: 59  ASTPGADMTQGQLDYTSRPLDVALQQDGWLVVQAADGAEGYTRNGNIQVGPTGQLTIQGH 118

Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG----KVIATMGLYSVDMSQGF 169
            V   G    +   S                    +       K++   G        G 
Sbjct: 119 PVIGEGGPITVPEGSEITIAADGTISALNPGDPPNTVAPVGRLKLVKAEGNEVQRSDDGL 178

Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
            R      +       L     + +  G LE SN   +  M  MI   ++
Sbjct: 179 FRLTAEAQAE--RGAVLAADPSIRIMSGVLEGSNVKPVEAMTDMIANARR 226


>gi|50403744|sp|P50611|FLGE_HELMU RecName: Full=Flagellar hook protein flgE
          Length = 454

 Score = 99.6 bits (246), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 38/208 (18%), Positives = 66/208 (31%), Gaps = 15/208 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G++   A +  L   ++N++N +T GF+  +  F +++               
Sbjct: 1   MLRSLWSGVSGMQAHQVALDVESNNIANVNTTGFKYSRASFVDMISQTKLIATSPHKGGL 60

Query: 49  -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGR 105
              +       V           GS  +T  + D A+EGD +F +     +    TRDG 
Sbjct: 61  GGQNDVSVGLGVNVNSTTKVFSQGSTQNTDVKTDLAIEGDGFFIISPDRGKTQNFTRDGE 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           F    +G+LV+  G      M        +  E            +   I    +     
Sbjct: 121 FLFDANGNLVTNGGYVVQGWMKDDLRNAEKISEDDFFRVDTTKPIQNIQIDPAMMMPARA 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT 193
           S     R N     ++         G T
Sbjct: 181 SSNISLRANLNAGRHVDQVANVFGLGST 208


>gi|237751739|ref|ZP_04582219.1| flagellar hook protein FlgE [Helicobacter bilis ATCC 43879]
 gi|229373105|gb|EEO23496.1| flagellar hook protein FlgE [Helicobacter bilis ATCC 43879]
          Length = 718

 Score = 99.6 bits (246), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 33/147 (22%), Positives = 56/147 (38%), Gaps = 15/147 (10%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G++   A +  L   ++N++N +TVGF+  +  F +++  +            
Sbjct: 1   MLRSLWSGVSGLQAHQVALDVESNNIANVNTVGFKYSRASFVDMLSQVKQIATSPYKNGL 60

Query: 49  -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGR 105
              +       V           G+  +T  + D A+EGD +F +   RG     TRDG 
Sbjct: 61  GGQNDFSVGMGVGINATTKVFSQGNTQNTDVKTDLAIEGDGFFIISRDRGETKNYTRDGE 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQ 132
           F     G+LV+  G            Q
Sbjct: 121 FLFDAKGNLVTNGGYVVQGWNRPPIDQ 147



 Score = 69.9 bits (169), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 44/128 (34%), Gaps = 5/128 (3%)

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           +       +  +    +  + +          + K   +A +GL +   S G     N+ 
Sbjct: 588 SETYNIAQNGYNAGDLMDVRFDANGALLGAFSNGKTLALAQVGLANFANSAGLQAEGNNI 647

Query: 177 ISPNIPPTPLEDLSGVTVKRG-----FLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
            S           +  T +RG      LE SN +    + Q+I + + F + +  I  ++
Sbjct: 648 FSETGNSGEPIIGAANTGRRGGVSGSKLEMSNVDLSRALTQLIVVQRGFQANSKAITTSD 707

Query: 232 KSMLEAIR 239
           + +   + 
Sbjct: 708 QILNTLLS 715


>gi|289804043|ref|ZP_06534672.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Typhi str. AG3]
          Length = 179

 Score = 99.6 bits (246), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 62/177 (35%), Gaps = 7/177 (3%)

Query: 70  VGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGKYPVLDMAS 128
            G+   T    D A++G  +F +  P G    TRDG F+V  +G LV+A G      +  
Sbjct: 2   QGNLSQTNNSKDVAIKGQGFFQVMLPDGTSAYTRDGSFQVDQNGQLVTAGGFQVQPAITI 61

Query: 129 VPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE 187
               +         V    +       +  + L +     G      +            
Sbjct: 62  PANALSITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMNDTGLESIGENLYIETQSSGAPN 121

Query: 188 DLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           + +        + +G++E SN N   E+  MI + + +   +  +   ++ + +  +
Sbjct: 122 ESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMLQKLTQ 178


>gi|224498764|ref|ZP_03667113.1| flagellar basal body rod protein FlgG [Listeria monocytogenes
           Finland 1988]
          Length = 259

 Score = 99.6 bits (246), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 86/251 (34%), Gaps = 16/251 (6%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV--------VGAIKNDID 53
                IG A  +   Q +   ++N++N  T GF+  ++    +         G +   + 
Sbjct: 1   MKGLYIGAAGMMNYMQHIQVHSNNVANAQTPGFKFDQLTSEVISRNKVNYQNGPVTRQVG 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFAL------EGDAWFALESPRGIILTRDGRFK 107
                V     +++   GS   T  + DF +      +G  +F       I L+R G+F 
Sbjct: 61  TIDYGVRPAATHINLTAGSSYITNRDRDFFMQDTDPTQGSNFFITAKNGEISLSRGGQFH 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
               G L +A G   +           +             ++  + +  +G   V  +Q
Sbjct: 121 SDQFGFLRTADGANLLSTTGEAIQVGQKTSIRAEANGDLYNAETSQYLGRLGTKFVSANQ 180

Query: 168 G--FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225
               V+     +  N   T         ++ G +E SN +   EM Q++   +   +   
Sbjct: 181 ADSLVKDGEGRLHINGVNTMNLPAGQGIIQNGVIETSNVDLGVEMVQLMDNQRMVQASKN 240

Query: 226 LIDENEKSMLE 236
           +++  +K   +
Sbjct: 241 VVNMFDKVYDK 251


>gi|323700469|ref|ZP_08112381.1| fagellar hook-basal body protein [Desulfovibrio sp. ND132]
 gi|323460401|gb|EGB16266.1| fagellar hook-basal body protein [Desulfovibrio desulfuricans
           ND132]
          Length = 516

 Score = 99.6 bits (246), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 69/169 (40%), Gaps = 5/169 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI---KNDIDQKISFVA 60
           S   G++   A  Q  S V++N++N+ T G++++ + F +V  +       + Q  + V 
Sbjct: 6   SMYTGISGLQAQSQATSVVSNNLANSTTTGYKSVSIAFEDVFYSTVYAGGSLGQVGNGVT 65

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR--GIILTRDGRFKVTDDGSLVSAS 118
           +         G++ +T +  D A+ GD ++ +  P       TRDG F +  DG LV + 
Sbjct: 66  TSSLTTDYSQGAYETTNSVTDVAINGDGFYIVVDPDTGNTYYTRDGGFTLDTDGYLVDSH 125

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           G +                +I     +      G+V   + L S +   
Sbjct: 126 GNHVQGWETEDGSITGGLVDIQIDNSQSPPQATGEVAIQVNLDSTETDN 174



 Score = 71.1 bits (172), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 17/124 (13%), Positives = 37/124 (29%), Gaps = 5/124 (4%)

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                D  +             V E    + + + + T  L     +QG      +  S 
Sbjct: 389 YTLSQDGYAPGELTDITINENGVIEGSYTNGQSQELYTFALADFTNTQGLYSEGGNLYSA 448

Query: 180 NIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
                             T+    LE SN ++  ++  +I +   + + + +I   +  +
Sbjct: 449 TTESGQALVGTPGSAGFGTIASNSLEQSNVDTATQLTNLIIIQAAYQANSKIITTADTLL 508

Query: 235 LEAI 238
             AI
Sbjct: 509 STAI 512


>gi|121533754|ref|ZP_01665581.1| protein of unknown function DUF1078 domain protein [Thermosinus
           carboxydivorans Nor1]
 gi|121307745|gb|EAX48660.1| protein of unknown function DUF1078 domain protein [Thermosinus
           carboxydivorans Nor1]
          Length = 420

 Score = 99.6 bits (246), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 63/179 (35%), Gaps = 14/179 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++     + R+  + +N++N +T+GF+  +V F +++               
Sbjct: 1   MMRSLFAGVSGLRNHQTRMDVIGNNIANVNTIGFKASRVNFQDILSQTMQGASSGIGNQG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106
                Q    V+          GSF  TG + D +++G  +F L     +  + TR G F
Sbjct: 61  GTNPIQIGLGVSIASIDTIFTDGSFQPTGKQTDLSIQGKGFFVLSPDGGKTEVFTRAGNF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
                G+ +     Y V+   +        D          +  +    AT  +   + 
Sbjct: 121 DFDRLGNFIVPGTGYKVVGWKADSNGNIDTDPSKRTTIDIPVGTQMPAQATKAITFANN 179



 Score = 84.9 bits (208), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 35/254 (13%), Positives = 77/254 (30%), Gaps = 28/254 (11%)

Query: 12  QLALEQRLSTVADNM----SNTDTVGFRTIKVKFSEV--------VGAIKNDIDQKISFV 59
             A   +  T A+N+    +N  TV  +     +  +        V     D     +  
Sbjct: 166 MPAQATKAITFANNLSADAANGTTV--KVSYDIYDNLGKRYTLPVVFTKTGDTTWDYTIS 223

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTD----DGSLV 115
            + +  ++    + ++     D A    +     +   I ++     +           V
Sbjct: 224 NTSEYTVATLPATSVTGRLTFDAATGKLSSTTPPTVTTIDISYTTPAQKVSGIQLKFDQV 283

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKG-----EISQKGKVIATMGLYSVDMSQGFV 170
           +  G    L +       P   E   +   G       + K + +A + L + +   G  
Sbjct: 284 TQYGGDTTLQIVDQDGYPPGSLEGVTIDPNGVIVGRFSNGKTRNLAQVALATFNNPAGLT 343

Query: 171 RRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225
           +  +S  + +      E           +  G LE SN +   E   MI   + F + + 
Sbjct: 344 KIGDSLYAVSSNSGTPEIGVTGSGGRGKLNPGTLEMSNVDLAQEFSNMIITQRGFQANSK 403

Query: 226 LIDENEKSMLEAIR 239
           +I   ++ + E   
Sbjct: 404 IISVTDEMLQELAN 417


>gi|86151187|ref|ZP_01069402.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni 260.94]
 gi|85841534|gb|EAQ58781.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni 260.94]
          Length = 545

 Score = 99.2 bits (245), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 43/217 (19%), Positives = 80/217 (36%), Gaps = 9/217 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI----KNDIDQKI 56
           M  SF  G++   +    +   A+N++N +T GF+    +F ++          +  Q  
Sbjct: 1   MMNSFYNGISGVKSNSFGIDITANNIANVNTTGFKYSDAQFKDIFYTTITTQSTNPAQGG 60

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLV 115
               +    +  E GS +++  E D AL+G  +F +    G    TR+G F+   +G LV
Sbjct: 61  YGSGAASSQVVFEQGSPVASDGEFDVALQGKGFFGVLGADGNAYYTRNGSFRRDANGYLV 120

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
            + G + +  M      I   D +  +      +            +   S G    + +
Sbjct: 121 DSYGNFVLGTMNPAFTGINYSDRVAGLMGDYLNTGTPVNNGFTVNSNNSFSIGTTASQGA 180

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQ 212
              P     P +    V    G L   N N+  E+ +
Sbjct: 181 IKVPVNMYLPPQVTQNVK-WSGSL---NTNTTTEVVK 213



 Score = 72.2 bits (175), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 44/124 (35%), Gaps = 7/124 (5%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             D  +                    + K  ++  + LY+    QG V   ++  +    
Sbjct: 419 QQDGVAEGFFEQYNISDDGSIVAQFSNGKNAIVGKLALYNFINEQGLVAMGDNIFAATAN 478

Query: 183 P-------TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
                      + ++    K GFLE SN +   E+  +I   + F++ +  I  +++ + 
Sbjct: 479 SGDASFIMKDGQVVNTAKFKGGFLEQSNVDLSAELSNLIVTQKAFDASSKSITTSDQMIQ 538

Query: 236 EAIR 239
           +AI 
Sbjct: 539 KAIN 542


>gi|308050023|ref|YP_003913589.1| flagellar basal-body rod protein FlgF [Ferrimonas balearica DSM
           9799]
 gi|307632213|gb|ADN76515.1| flagellar basal-body rod protein FlgF [Ferrimonas balearica DSM
           9799]
          Length = 242

 Score = 99.2 bits (245), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 44/242 (18%), Positives = 95/242 (39%), Gaps = 5/242 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M        +    + +  +  A+N++N +T GFR    +      A+            
Sbjct: 1   MDKLLYTAASGANRVMEAQAIRANNLANLNTNGFRADLERVQAH--ALGGSGLNTRVMAQ 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           + +   +   G   +TG  LD A++GD W  +++  G   TR G   +  DG  V+  G+
Sbjct: 59  TQQSGANLSAGELNATGRTLDVAIQGDGWLTVQTADGEAYTRAGAMVLDADG-FVTIDGR 117

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF-VRRENSGISP 179
             +     + +   ++  I   G    +  +G +I  +G   +   +G  + +   G+  
Sbjct: 118 AVLGLDGPIQLPEYRELNIGEDGTISLLPAEGGLIEEVGQLKLVNPEGNALEKGTDGLMR 177

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
                       V +  GFLE SN  ++ E+   + L+++F     L+    +++ ++  
Sbjct: 178 LRDGEIAPQDEAVQLASGFLEGSNVTAVEELLASMSLSRQFELQVKLMKSA-ETLAQSGN 236

Query: 240 NI 241
            +
Sbjct: 237 RL 238


>gi|312792656|ref|YP_004025579.1| fagellar hook-basal body protein [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312179796|gb|ADQ39966.1| fagellar hook-basal body protein [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 494

 Score = 99.2 bits (245), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 66/155 (42%), Gaps = 15/155 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S    ++A  A + R+  + DN++N +TVGF++ +V F+ V  ++            
Sbjct: 1   MMRSMFSSISALRAHQTRMDVIGDNIANVNTVGFKSSRVTFASVFASVLKSASAPDTASG 60

Query: 49  --KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGR 105
              ++  Q    V+     ++   GS   T    D A+EGD +F +    +    TR G 
Sbjct: 61  RGGSNPMQIGLGVSVASVDMNMTRGSLQRTDNPTDLAIEGDGFFVVGGDGKAPRFTRAGN 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF 140
           F +   G+LV+A+G   +  M     +     +  
Sbjct: 121 FSLDKMGNLVTATGLNVLGWMYDPVNKQIDTTKSP 155



 Score = 88.8 bits (218), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 30/223 (13%), Positives = 71/223 (31%), Gaps = 23/223 (10%)

Query: 24  DNM--SNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELD 81
           DN+  +NT+ + F   +++F +  G + N   +      S K  +  +  S      +  
Sbjct: 285 DNIEGANTNFIAF--GRIEF-DSKGQVINVQLEGAQNQNSNKFTIKFKNNSLDEITFDTS 341

Query: 82  FALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFN 141
                +     +       + D   +        + S +   +D     I +        
Sbjct: 342 IGNTDETLNIFKFDYIKQYSLDSSIRAKKVSGYAAGSLQGFNVDATGKIIGVYSN----- 396

Query: 142 VGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKR 196
                      ++I  + + +     G  R  ++           E       S  T+ +
Sbjct: 397 --------GLNQIIGQIAVATFANPAGLQRIGDNLYINTPNSGDPEIGIPGTGSRGTIFQ 448

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G LE SN +   E   MI   + + +   +I  +++ + + + 
Sbjct: 449 GTLEMSNVDLAKEFTDMIVTQRGYQANARVITASDELLQDLVN 491


>gi|254853114|ref|ZP_05242462.1| flagellar basal body rod protein FlgG [Listeria monocytogenes FSL
           R2-503]
 gi|300764493|ref|ZP_07074486.1| flagellar basal-body rod protein [Listeria monocytogenes FSL
           N1-017]
 gi|258606464|gb|EEW19072.1| flagellar basal body rod protein FlgG [Listeria monocytogenes FSL
           R2-503]
 gi|300514847|gb|EFK41901.1| flagellar basal-body rod protein [Listeria monocytogenes FSL
           N1-017]
          Length = 259

 Score = 99.2 bits (245), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 42/251 (16%), Positives = 88/251 (35%), Gaps = 16/251 (6%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV--------VGAIKNDID 53
                IG A  +   Q +   ++N++N  T GF+  ++    +         G++   + 
Sbjct: 1   MKGLYIGAAGMMNYMQHIQVHSNNVANAQTPGFKFDQLTSEVISRNKVNYQNGSVARQVG 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFAL------EGDAWFALESPRGIILTRDGRFK 107
                V     +++   GS   T  + DF +      +G  +F       I L+R G+F 
Sbjct: 61  TIDYGVRPAATHINLTAGSSYITNRDRDFFMQDTDPTQGSNFFITAKNGEISLSRGGQFH 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
               G L +A G   +           +             ++ G+ +  +G   V  +Q
Sbjct: 121 SDQFGFLRTADGANLLSATGEAIQVGQKTSIRAEANGNLYNAETGQYLGRLGTKFVSANQ 180

Query: 168 G--FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225
               V+     +  N   T         ++ G +E SN +   EM Q++   +   +   
Sbjct: 181 ADSLVKDGEGRLHVNGINTMNLPAGQGIIQNGVIETSNVDLGVEMVQLMDNQRMVQASKN 240

Query: 226 LIDENEKSMLE 236
           +++  +K   +
Sbjct: 241 VVNMFDKVYDK 251


>gi|313624924|gb|EFR94832.1| flagellar basal body rod protein FlgG [Listeria innocua FSL J1-023]
          Length = 259

 Score = 99.2 bits (245), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 85/251 (33%), Gaps = 16/251 (6%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV--------VGAIKNDID 53
                IG A  +   Q +   ++N++N  T GF+  ++    +           +   + 
Sbjct: 1   MKGLYIGAAGMMNYMQYIQVHSNNVANAQTPGFKFDQLTSEVISRNKVNYQNSPVAKQVG 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFAL------EGDAWFALESPRGIILTRDGRFK 107
                V     +++   GS   T  + DF +      +G  +F       I L+R G+F 
Sbjct: 61  TIDYGVRPAATHINLTAGSSYITNRDRDFFMQDTNPEQGSNFFITAKNGEISLSRGGQFH 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
               G L +A G   +           +             ++  + +  +G   V  +Q
Sbjct: 121 TDQFGFLRTADGANILSSTGEAIQVGQKTAIRAEANGDLYNAETNQYLGRLGTKFVSANQ 180

Query: 168 --GFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225
               V+     +  N   T         ++ G LE SN +   EM Q++   +   +   
Sbjct: 181 VDNLVKDGEGRLHVNGINTMNLPAGQGNIQNGVLETSNVDLGVEMVQLMDNQRMVQASKN 240

Query: 226 LIDENEKSMLE 236
           +++  +K   +
Sbjct: 241 VVNMFDKVYDK 251


>gi|207108815|ref|ZP_03242977.1| flagellar hook protein FlgE [Helicobacter pylori HPKX_438_CA4C1]
          Length = 167

 Score = 99.2 bits (245), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 60/165 (36%), Gaps = 15/165 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G+    A +  L   ++N++N +T GF+  +  F +++  +            
Sbjct: 1   MLRSLWSGVNGMQAHQIALDIESNNIANVNTTGFKYSRASFVDMLSQVKLIATAPYKNGL 60

Query: 49  -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGR 105
              +       V           G+  +T  + D A++GD +F +   RGI    TRDG 
Sbjct: 61  AGQNDFSVGLGVGVDATTKIFSQGNIQNTDVKTDLAIQGDGFFIISPDRGITRNFTRDGE 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ 150
           F     GSLV+  G      + +      +  +   +   G    
Sbjct: 121 FLFDSQGSLVTTGGLVVQGWVRNGSDTGNKGSDTDALKVDGSAIH 165


>gi|85859175|ref|YP_461377.1| flagellar hook protein [Syntrophus aciditrophicus SB]
 gi|85722266|gb|ABC77209.1| flagellar hook protein [Syntrophus aciditrophicus SB]
          Length = 518

 Score = 99.2 bits (245), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 61/128 (47%), Gaps = 4/128 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA---IKNDIDQKIS 57
           M  +  IG     A ++++  + +N++N+ T+G+++   +F+ ++       +   Q   
Sbjct: 12  MSNALWIGTTGLNASQRQMDIIGNNLANSSTLGYKSADTQFANMLSQSLTSGSGSFQVGQ 71

Query: 58  FVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVS 116
            VA        + GSF STG+  D A++G+ +F + +    I  TR G F +  DG LV 
Sbjct: 72  GVAISSVNTKFDQGSFESTGSVTDMAIDGEGFFPVKDKEGAIYYTRAGAFVIDKDGYLVD 131

Query: 117 ASGKYPVL 124
            +G     
Sbjct: 132 VNGYRVQG 139



 Score = 75.3 bits (183), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 15/133 (11%), Positives = 40/133 (30%), Gaps = 4/133 (3%)

Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170
            G   ++  K   +D  +  +      E   +      + +   +  + L +        
Sbjct: 383 TGYAATSVIKALEVDGYTSGVLKSLSVEKDGIISGIFTNGQTSDLGQVVLANFPNVGALR 442

Query: 171 RRENSGISPNIPPTP----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
           +  +     N                 +    LE SN +   E   MI+  + + +   +
Sbjct: 443 KIGSYFAETNFSGAAIINSPGTGGLGEIMSNSLEQSNTDVSMEFVNMINAQRAYQASARI 502

Query: 227 IDENEKSMLEAIR 239
           I  +++ + E + 
Sbjct: 503 ITTSDEMLTELMN 515


>gi|203287743|ref|YP_002222758.1| flagellar hook protein [Borrelia recurrentis A1]
 gi|201084963|gb|ACH94537.1| flagellar hook protein [Borrelia recurrentis A1]
          Length = 441

 Score = 99.2 bits (245), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 31/139 (22%), Positives = 52/139 (37%), Gaps = 12/139 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++     + R+  V +N+SN +TVGF+  +V F +++    +          
Sbjct: 1   MMRSLYSGVSGLQNHQTRMDVVGNNISNVNTVGFKKGRVNFQDMISQSISGASRPTDGRG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                Q    +           GSF ST    D  + G+ +F L        TR G F V
Sbjct: 61  GVNPKQIGLGMTVATVDTIHTQGSFQSTQKASDLGISGNGFFILRDGDNSFYTRAGAFDV 120

Query: 109 TDDGSLVSASGKYPVLDMA 127
             +  LV+ +    +    
Sbjct: 121 DSNRHLVNPANGMRIQGWM 139



 Score = 77.6 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 16/121 (13%), Positives = 39/121 (32%), Gaps = 5/121 (4%)

Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183
            +   +      + +   V      +   + I  + L S     G  +  ++  +     
Sbjct: 318 QNGYGMGYMENYEIDQNGVITGVYSNGIRRTIGKIALASFVNPGGLAKAGDTNFTETSNS 377

Query: 184 TPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
                         T++ G LE +N +   +   MI   + F +    I  +++ + E +
Sbjct: 378 GQARIGETGFAGLGTIRSGVLEMANVDLAEQFTDMIVTQRGFQANAKTITTSDQLLQELV 437

Query: 239 R 239
           R
Sbjct: 438 R 438


>gi|300114798|ref|YP_003761373.1| flagellar basal-body rod protein FlgF [Nitrosococcus watsonii
           C-113]
 gi|299540735|gb|ADJ29052.1| flagellar basal-body rod protein FlgF [Nitrosococcus watsonii
           C-113]
          Length = 247

 Score = 99.2 bits (245), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 50/247 (20%), Positives = 102/247 (41%), Gaps = 7/247 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + +       Q  +    N++N +T GFR    +F  +   +  +      +  
Sbjct: 1   MDRMLYVAMTGAQQTMQATAANNHNLANLNTTGFRADLSQFRSI--PVFGEGHPTRVYAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGD-AWFALESPR-GIILTRDGRFKVTDDGSLVSAS 118
           + +  +    G   STG ELD A++G+  W A+ SP  G   TR G  K+T +G L + +
Sbjct: 59  AERPGVDFTPGPLQSTGRELDVAVQGEGGWLAVRSPSGGEAYTRAGNLKITSNGILTTGA 118

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEI---SQKGKVIATMGLYSVDMSQGFVRRENS 175
           G   + +  ++ I   QK EI   G             ++    +  V+     ++++  
Sbjct: 119 GHPVLGEGGTIAIPPAQKIEIGADGTLSIRPLGQAANTLVVLDRIKLVNPPLDQLQKDEE 178

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
           G+            + V++  G LE SNA+ +  + +MI L +++   T ++   ++   
Sbjct: 179 GLMTMANGGQAPADASVSLVSGKLEASNASGVDALVEMIALARQYEMQTKMMQTAKELDT 238

Query: 236 EAIRNIA 242
            + + + 
Sbjct: 239 ASAQMLR 245


>gi|7514872|pir||S61455 flagellar hook protein flgE - Helicobacter mustelae  (fragment)
          Length = 454

 Score = 99.2 bits (245), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 38/208 (18%), Positives = 66/208 (31%), Gaps = 15/208 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G++   A +  L   ++N++N +T GF+  +  F +++               
Sbjct: 1   MLRSLWSGVSGMQAHQVALDVESNNIANVNTTGFKYSRATFVDMISQTKLIATSPHKGGL 60

Query: 49  -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGR 105
              +       V           GS  +T  + D A+EGD +F +     +    TRDG 
Sbjct: 61  GGQNDVSVGLGVNVNSTTKVFSQGSTQNTDVKTDLAIEGDGFFIISPDRGKTQNFTRDGE 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           F    +G+LV+  G      M        +  E            +   I    +     
Sbjct: 121 FLFDANGNLVTNGGYVVQGWMKDDLRNAEKISEDDFFRVDTTKPIQNIQIDPAMMMPARA 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT 193
           S     R N     ++         G T
Sbjct: 181 SSNISLRANLNAGRHVDQVANVFGLGST 208


>gi|260886641|ref|ZP_05897904.1| flagellar hook protein FlgE [Selenomonas sputigena ATCC 35185]
 gi|330839527|ref|YP_004414107.1| flagellar hook-basal body protein [Selenomonas sputigena ATCC
           35185]
 gi|260863784|gb|EEX78284.1| flagellar hook protein FlgE [Selenomonas sputigena ATCC 35185]
 gi|329747291|gb|AEC00648.1| flagellar hook-basal body protein [Selenomonas sputigena ATCC
           35185]
          Length = 496

 Score = 99.2 bits (245), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 67/183 (36%), Gaps = 16/183 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++   + + R+  + +N++N +T+GF++ +V F++ +   ++          
Sbjct: 1   MMRSLFSGVSGLKSHQTRMDVIGNNIANVNTIGFKSSRVTFADTLYQTQSGAAAPTGTVG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES---PRGIILTRDGR 105
                Q    V            S  +TG   D AL G+  F +      +    TR G 
Sbjct: 61  GTNPKQIGLGVGVASVDQLFGDASPQATGKNTDLALSGNGLFVVSRDAGGKDKYYTRAGN 120

Query: 106 FKVTDDGSLVSA-SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
           F    + + V   SG + V   A     I  K     +  K  +   G    T   Y  +
Sbjct: 121 FSFDANYNYVVPGSGYHVVGWNADENGSIDTKGTPTGIQIKDAMRSMGAKATTTISYKGN 180

Query: 165 MSQ 167
           M+ 
Sbjct: 181 MNS 183



 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 17/143 (11%), Positives = 42/143 (29%), Gaps = 4/143 (2%)

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           T      +        +       D  S         +   +      + + + +A + +
Sbjct: 351 TMTATVDLKSLTQYSGSDTIKADYDGHSAGTLKEINTDQSGILTGTYTNGEKRALAQVAV 410

Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGV----TVKRGFLEDSNANSMYEMGQMIHL 216
              D + G  +   +  + +         +      T+    LE SN +   E   M+  
Sbjct: 411 AQFDNAPGLTKAGANLYTESNNSGTANIKTVSALGLTLTPSALEMSNVDVANEFADMVVT 470

Query: 217 TQKFNSITTLIDENEKSMLEAIR 239
            + F S + +I   ++ +   I 
Sbjct: 471 QRGFQSNSKVITVGDEMLETVIN 493


>gi|119477952|ref|ZP_01618052.1| Flagellar basal body rod protein [marine gamma proteobacterium
           HTCC2143]
 gi|119448865|gb|EAW30107.1| Flagellar basal body rod protein [marine gamma proteobacterium
           HTCC2143]
          Length = 275

 Score = 99.2 bits (245), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 47/247 (19%), Positives = 100/247 (40%), Gaps = 5/247 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  + +++   +    +  A+N++N +T GF+    +   + G    D     ++  
Sbjct: 29  MDKAIYLAMSSGQNIMSAQAIHANNLANANTNGFQADFAQARAM-GVYYGDGHPTRAYAM 87

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G+ I TG +LD A+ GD W A+++P      TR G  KV  +G L++A+ 
Sbjct: 88  TESPGTDFNRGALIETGRDLDMAVVGDGWIAVQAPDGSEAYTRMGSLKVDPNGQLLTATD 147

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA---TMGLYSVDMSQGFVRRENSG 176
              + D   + +    K  +   G                   +  V      + +   G
Sbjct: 148 LPVLGDGGPISLPPADKITLGADGTITIRPTGQPPEVLSIVDRIKLVKPDYADLDKGVDG 207

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           +   +     E  + + ++ GF+E SN N + E+  ++ L ++F     ++   E++   
Sbjct: 208 LMRRLDGGQQEPDASIRLQSGFVESSNVNPVDELTAIMALARQFEINVKMMKVMEENSDA 267

Query: 237 AIRNIAS 243
           A + + S
Sbjct: 268 ARQVLRS 274


>gi|312135845|ref|YP_004003183.1| fagellar hook-basal body protein [Caldicellulosiruptor owensensis
           OL]
 gi|311775896|gb|ADQ05383.1| fagellar hook-basal body protein [Caldicellulosiruptor owensensis
           OL]
          Length = 489

 Score = 99.2 bits (245), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 70/190 (36%), Gaps = 15/190 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S    ++A  A + R+  + DN++N +TVGF++ +V F+ V  ++            
Sbjct: 1   MMRSMFSSISALRAHQTRMDVIGDNIANVNTVGFKSSRVTFASVFASVVKSASAPDTASG 60

Query: 49  --KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGR 105
              ++  Q    V+     ++   GS   T    D A+EGD +F +    +    TR G 
Sbjct: 61  RGGSNPMQIGLGVSVASADMNMTRGSLQRTDNPTDLAIEGDGFFVVGGDGKAPRYTRAGN 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           F +   G+LV+A+G   +  M           +  +                   +  ++
Sbjct: 121 FSLDRMGNLVTATGLNVLGWMYDPVNNQIDTTKSPSKINILAFPTLPPKATDKISFDGNL 180

Query: 166 SQGFVRRENS 175
           S         
Sbjct: 181 SADLKTYSGQ 190



 Score = 87.2 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 15/93 (16%), Positives = 36/93 (38%), Gaps = 5/93 (5%)

Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANS 206
            ++I  + + +     G  R  ++     +     E  +       T+ +G LE SN + 
Sbjct: 394 NQLIGQIAVATFANPAGLQRIGDNLYINTVNSGDPEIGTPGSGSRGTISQGTLEMSNVDL 453

Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             E   MI   + + +   +I  +++ + E + 
Sbjct: 454 AKEFTDMIVTQRGYQANARVITSSDEILQELVN 486


>gi|222095395|ref|YP_002529455.1| flagellar basal body rod protein flgg [Bacillus cereus Q1]
 gi|221239453|gb|ACM12163.1| flagellar basal-body rod protein [Bacillus cereus Q1]
          Length = 267

 Score = 99.2 bits (245), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 50/265 (18%), Positives = 93/265 (35%), Gaps = 25/265 (9%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53
                IG    +   QR++  ++N++N  T GF+   +        +          +I 
Sbjct: 1   MNGLYIGSMGMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIG 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDF-----ALEGDAWFALESPRGIILTRDGRFKV 108
                V     +++   G+   T +  DF     A    ++F         LTRDG F +
Sbjct: 61  SVDYAVVPAATHVNLVQGNIQMTNSATDFFLDDGANGTTSFFVTSKNDETFLTRDGSFTI 120

Query: 109 TDDGSLVSASGKYPVLDMA-------SVPIQIPQKDEIFNVGEKGEISQKGK---VIATM 158
             D  L ++SG Y +           +V   +    EI+     G + +      VIA +
Sbjct: 121 NSDRYLQTSSGAYVMDVNNERIKIPENVNFFVSNNGEIYREVNDGTLQKPDIKRIVIAQL 180

Query: 159 GLYSVDMSQG--FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
              +VD       ++REN   +               VK   LE+SN +   EM  ++  
Sbjct: 181 QTKTVDAEANSRLMQRENKSFTLAEGNIADLPNGTGLVKNHMLENSNVDMTKEMADLMTD 240

Query: 217 TQKFNSITTLIDENEKSMLEAIRNI 241
            +  ++   ++   +K   +    I
Sbjct: 241 QRMISASQRVMTSFDKIYEKEANEI 265


>gi|47095247|ref|ZP_00232858.1| flagellar basal-body rod protein, putative [Listeria monocytogenes
           str. 1/2a F6854]
 gi|254829339|ref|ZP_05234026.1| flagellar basal body rod protein FlgG [Listeria monocytogenes FSL
           N3-165]
 gi|254830327|ref|ZP_05234982.1| flagellar basal body rod protein FlgG [Listeria monocytogenes
           10403S]
 gi|254900082|ref|ZP_05260006.1| flagellar basal body rod protein FlgG [Listeria monocytogenes
           J0161]
 gi|254911365|ref|ZP_05261377.1| conserved hypothetical protein [Listeria monocytogenes J2818]
 gi|254935692|ref|ZP_05267389.1| flagellar basal body rod protein FlgG [Listeria monocytogenes
           F6900]
 gi|255026599|ref|ZP_05298585.1| flagellar basal body rod protein FlgG [Listeria monocytogenes FSL
           J2-003]
 gi|284801012|ref|YP_003412877.1| flagellar basal body rod protein FlgG [Listeria monocytogenes
           08-5578]
 gi|284994154|ref|YP_003415922.1| flagellar basal body rod protein FlgG [Listeria monocytogenes
           08-5923]
 gi|47016318|gb|EAL07240.1| flagellar basal-body rod protein, putative [Listeria monocytogenes
           str. 1/2a F6854]
 gi|258601751|gb|EEW15076.1| flagellar basal body rod protein FlgG [Listeria monocytogenes FSL
           N3-165]
 gi|258608274|gb|EEW20882.1| flagellar basal body rod protein FlgG [Listeria monocytogenes
           F6900]
 gi|284056574|gb|ADB67515.1| flagellar basal body rod protein FlgG [Listeria monocytogenes
           08-5578]
 gi|284059621|gb|ADB70560.1| flagellar basal body rod protein FlgG [Listeria monocytogenes
           08-5923]
 gi|293589301|gb|EFF97635.1| conserved hypothetical protein [Listeria monocytogenes J2818]
          Length = 259

 Score = 99.2 bits (245), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 86/251 (34%), Gaps = 16/251 (6%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV--------VGAIKNDID 53
                IG A  +   Q +   ++N++N  T GF+  ++    +         G +   + 
Sbjct: 1   MKGLYIGAAGMMNYMQHIQVHSNNVANAQTPGFKFDQLTSEVISRNKVNYQNGPVTRQVG 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFAL------EGDAWFALESPRGIILTRDGRFK 107
                V     +++   GS   T  + DF +      +G  +F       I L+R G+F 
Sbjct: 61  TIDYGVRPAATHINLTAGSSYITNRDRDFFMQDTDPTQGSNFFITAKNGEISLSRGGQFH 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
               G L +A G   +           +             ++  + +  +G   V  +Q
Sbjct: 121 SDQFGFLRTADGANLLSATGEAIQVGQKTSIRAEANGDLYNAETSQYLGRLGTKFVSANQ 180

Query: 168 G--FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225
               V+     +  N   T         ++ G +E SN +   EM Q++   +   +   
Sbjct: 181 ADSLVKDGEGRLHINGVNTMNLPAGQGIIQNGVIETSNVDLGVEMVQLMDNQRMVQASKN 240

Query: 226 LIDENEKSMLE 236
           +++  +K   +
Sbjct: 241 VVNMFDKVYDK 251


>gi|203284204|ref|YP_002221944.1| flagellar hook protein [Borrelia duttonii Ly]
 gi|201083647|gb|ACH93238.1| flagellar hook protein [Borrelia duttonii Ly]
          Length = 441

 Score = 98.8 bits (244), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 31/139 (22%), Positives = 52/139 (37%), Gaps = 12/139 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++     + R+  V +N+SN +TVGF+  +V F +++    +          
Sbjct: 1   MMRSLYSGVSGLQNHQTRMDVVGNNISNVNTVGFKKGRVNFQDMISQSISGASRPTDGRG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                Q    +           GSF ST    D  + G+ +F L        TR G F V
Sbjct: 61  GVNPKQIGLGMTVAAVDTIHTQGSFQSTQKASDLGISGNGFFILRDGDNSFYTRAGAFDV 120

Query: 109 TDDGSLVSASGKYPVLDMA 127
             +  LV+ +    +    
Sbjct: 121 DSNRHLVNPANGMRIQGWM 139



 Score = 80.3 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 17/121 (14%), Positives = 39/121 (32%), Gaps = 5/121 (4%)

Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183
            +   +      + +   V      +   + I  + L S     G  +  ++  +     
Sbjct: 318 QNGYGMGYMENYEIDQNGVITGVYSNGIRRTIGKIALASFVNPGGLAKAGDTNFTETSNS 377

Query: 184 TPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
                         T++ G LE SN +   +   MI   + F +    I  +++ + E +
Sbjct: 378 GQARIGETGFAGLGTIRSGVLEMSNVDLAEQFTDMIVTQRGFQANAKTITTSDQLLQELV 437

Query: 239 R 239
           R
Sbjct: 438 R 438


>gi|315636316|ref|ZP_07891566.1| flagellar distal rod protein FlgG [Arcobacter butzleri JV22]
 gi|315479405|gb|EFU70088.1| flagellar distal rod protein FlgG [Arcobacter butzleri JV22]
          Length = 239

 Score = 98.8 bits (244), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 52/254 (20%), Positives = 93/254 (36%), Gaps = 31/254 (12%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTI---KVKFSEVVGAIKNDIDQK-- 55
           M        A+ +    RL  +++N++N +T+GF+     +  F+  +  +++       
Sbjct: 1   MNQGVYPLAASMINQINRLDQISNNLANVNTLGFKQEGTTETTFNYYLHKMESQQKLMLK 60

Query: 56  -----ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFKV 108
                 +       Y + E+G  + TG  LDFAL     F         I+ TRDG FK 
Sbjct: 61  ESVVTNNIPKIDSRYTNAEMGPIVMTGNSLDFALNEPDTFFKIQNENGDIVYTRDGAFK- 119

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
             DG LV ++G             +   +E   + +  E            L  +  +  
Sbjct: 120 NLDGFLVDSNGNNV----------LNADNEAIVIEDGFESQIGVAKTPYTNLEKMGDNTY 169

Query: 169 FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228
            V+        NI      + +   + RG +E SN NS+  M ++I   ++F+     I 
Sbjct: 170 LVK--------NIDEAEQIENNDGKIVRGAVEQSNVNSVTAMVELIDAHRRFDQSQRAIK 221

Query: 229 ENEKSMLEAIRNIA 242
             +      I  I 
Sbjct: 222 TIDDLNAGLIEKIG 235


>gi|302872562|ref|YP_003841198.1| fagellar hook-basal body protein [Caldicellulosiruptor obsidiansis
           OB47]
 gi|302575421|gb|ADL43212.1| fagellar hook-basal body protein [Caldicellulosiruptor obsidiansis
           OB47]
          Length = 489

 Score = 98.8 bits (244), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 70/190 (36%), Gaps = 15/190 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S    ++A  A + R+  + DN++N +TVGF++ +V F+ V  ++            
Sbjct: 1   MMRSMFSSISALRAHQTRMDVIGDNIANVNTVGFKSSRVTFASVFASVLKSASAPDTASG 60

Query: 49  --KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGR 105
              ++  Q    V+     ++   GS   T    D A+EGD +F +    +    TR G 
Sbjct: 61  RGGSNPMQIGLGVSVASVDMNMTRGSLQRTDNPTDLAIEGDGFFVVGGDGKAPRFTRAGN 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           F +   G+LV+A+G   +  M           +  +                   +  ++
Sbjct: 121 FSLDKMGNLVTATGLNVLGWMYDPVNNQIDTTKSPSKINILAFPTLPPKATDKISFDGNL 180

Query: 166 SQGFVRRENS 175
           S         
Sbjct: 181 SADLKAYSGQ 190



 Score = 87.2 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 14/93 (15%), Positives = 36/93 (38%), Gaps = 5/93 (5%)

Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANS 206
            ++I  + + +     G  R  ++     +     E  +       T+ +G LE SN + 
Sbjct: 394 NQLIGQIAVATFANPAGLQRIGDNLYINTVNSGDPEIGTPGSGSRGTISQGTLEMSNVDL 453

Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             E   MI   + + +   +I  +++ + + + 
Sbjct: 454 AKEFTDMIVTQRGYQANARVITASDELLQDLVN 486


>gi|260772276|ref|ZP_05881192.1| flagellar basal-body rod protein FlgG [Vibrio metschnikovii CIP
           69.14]
 gi|260611415|gb|EEX36618.1| flagellar basal-body rod protein FlgG [Vibrio metschnikovii CIP
           69.14]
          Length = 189

 Score = 98.8 bits (244), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 68/182 (37%), Gaps = 8/182 (4%)

Query: 68  KEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYPVLDM 126
              G+  +T   LD  +EGD +F +  P   I  +R+G+F +  +G++V++   Y V   
Sbjct: 8   HTNGNVQTTNNSLDMMIEGDGFFQILMPDGNIGYSRNGQFTLNAEGAIVTSGAGYLVQPE 67

Query: 127 ASVPIQIPQKDEIFNVGEKGE--ISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT 184
             VP          +          Q+ +V+  + +       G      +   P     
Sbjct: 68  IVVPEDAISITVGNDGEVSVRLRGQQENQVLGQITIVDFINPGGLEPVGQNLYLPTGASG 127

Query: 185 PLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             ++          +++  LE SN N   E+  MI   + +   + +I   ++ M    +
Sbjct: 128 DPQEGVPGLDGLGNIRQSMLESSNVNVTEELVNMIEAQRVYEMNSKVISSVDQMMSFVNQ 187

Query: 240 NI 241
            +
Sbjct: 188 QL 189


>gi|78485811|ref|YP_391736.1| hypothetical protein Tcr_1470 [Thiomicrospira crunogena XCL-2]
 gi|78364097|gb|ABB42062.1| Flagellar basal-body rod protein FlgF [Thiomicrospira crunogena
           XCL-2]
          Length = 245

 Score = 98.8 bits (244), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 87/241 (36%), Gaps = 9/241 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + ++    +    +  A+N++N +T GF+    +F      ++       ++  
Sbjct: 1   MNRMLYVSMSGAKEVMLSQANNANNLANANTDGFKQDFNQFRA--QHVQGPGWNSRTYSL 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
             +       G+   TG +LD   + + + A+++P     LTR     +  +G L+   G
Sbjct: 59  DERPATDFAPGAVKVTGRDLDIMTKENGFLAIQAPDGSEALTRSASMHLNPEGDLLDVHG 118

Query: 120 KYPVLDMASVPIQIP----QKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
              + +  +     P    Q      +      S     +    +  V      + +   
Sbjct: 119 NPVLNEGGAPINIPPAKSIQIGSDGTISFIPADSTNNLAVVLDQVRLVQPDIKQLEKGLD 178

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
           G   N       + + + V  G LE SN N++  +  MI L++K+     ++  ++    
Sbjct: 179 GYIRNNG--AELEQAPIRVVSGALESSNVNTVEALTNMIELSRKYEMQIKMMSTSKNHAQ 236

Query: 236 E 236
           +
Sbjct: 237 K 237


>gi|150390478|ref|YP_001320527.1| hypothetical protein Amet_2716 [Alkaliphilus metalliredigens QYMF]
 gi|149950340|gb|ABR48868.1| protein of unknown function DUF1078 domain protein [Alkaliphilus
           metalliredigens QYMF]
          Length = 441

 Score = 98.8 bits (244), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 59/145 (40%), Gaps = 15/145 (10%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S    ++   A + R+  + +N++N +TVG++  +V F EV                
Sbjct: 1   MMRSMFSAVSGLQAHQLRMDAIGNNIANVNTVGYKGTRVTFQEVFSQTIRGAGAPQGGRG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF---ALESPRGIILTRDGR 105
                Q    V           GS  STG   D  + GD +F   +  + +    TR G 
Sbjct: 61  GTNPQQVGLGVNVASMSTFHVRGSAESTGYNTDLMINGDGFFIVSSDANDQNHTYTRAGN 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVP 130
           F++ + G+L++  G+  + +M  V 
Sbjct: 121 FELDEAGNLITPGGQRVMGNMYDVE 145



 Score = 82.2 bits (201), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 17/98 (17%), Positives = 35/98 (35%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVR-RENSGISPNIPPTP----LEDLSGVTVKRGFLED 201
             +   + I  + + +     G  +  EN   +      P           T+  G LE 
Sbjct: 341 FNNGYKRPIGQVAIANFRNPAGLEKIGENMYRNSPNSGEPLVGTPGSGGRGTLNPGTLEM 400

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E   MI   + F + + +I  +++ + E + 
Sbjct: 401 SNVDLSREFTNMITTQRGFQANSRIITTSDEMLQEVVN 438


>gi|291286229|ref|YP_003503045.1| fagellar hook-basal body protein [Denitrovibrio acetiphilus DSM
           12809]
 gi|290883389|gb|ADD67089.1| fagellar hook-basal body protein [Denitrovibrio acetiphilus DSM
           12809]
          Length = 829

 Score = 98.8 bits (244), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 60/145 (41%), Gaps = 14/145 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S    ++     +Q +  + +N+SN +TVG+++ +  F +++               
Sbjct: 1   MMRSLYSAISGLSVNQQAMDVLGNNISNVNTVGYKSGRAVFEDMLSQTLVGSTAPSDTLG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP--RGIILTRDGRF 106
             +  Q     +        E GS  ST    D A++GD +F ++      ++ TR G F
Sbjct: 61  GTNSTQVGLGTSLAGVDTIFETGSMQSTSVNTDLAIQGDGFFVIKGAGSSDLLYTRAGDF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPI 131
           +    GSLV++SG Y    M     
Sbjct: 121 RFDTSGSLVTSSGFYVQGWMVDPDT 145



 Score = 76.1 bits (185), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 15/91 (16%), Positives = 32/91 (35%), Gaps = 5/91 (5%)

Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMY 208
            IA +   +     G  +  ++    +            T     V    LE+SN +   
Sbjct: 736 TIAQIATATFTNPGGLTKVGDTTFQKSSNSGDPAIGRPGTGFRGKVAAETLENSNVDLST 795

Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           E   MI   + F + + +I  +++ + E + 
Sbjct: 796 EFVNMITTQRGFQANSRVITTSDEMLQELMS 826


>gi|170722892|ref|YP_001750580.1| flagellar hook protein FlgE [Pseudomonas putida W619]
 gi|169760895|gb|ACA74211.1| flagellar basal body FlaE domain protein [Pseudomonas putida W619]
          Length = 451

 Score = 98.8 bits (244), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 39/193 (20%), Positives = 74/193 (38%), Gaps = 3/193 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---DIDQKISFVA 60
           SFNIGL+   A  ++L    +N++N +T GF++ + +F++V           +Q  + V 
Sbjct: 2   SFNIGLSGLYAANKQLDVTGNNIANVNTTGFKSSRAEFADVYAGANRLGVGKNQVGNGVR 61

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
                     G   +TG  LD  ++G  +F L      + TR G F+   +  +V++ G 
Sbjct: 62  LAAISQQFSQGDVNNTGNVLDMGIQGQGFFVLSDNGSRVYTRAGAFQADKNNFVVTSDGL 121

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
                 A    +I +        +   +  K   +   G+     +       + G    
Sbjct: 122 RLQGYAADANGKIQKGVLSDLQIDTSALQPKATSLIDQGINLNSSATDIPLEIDDGTGAM 181

Query: 181 IPPTPLEDLSGVT 193
           +P  P +     T
Sbjct: 182 VPNLPFDPTDETT 194



 Score = 68.0 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 17/98 (17%), Positives = 34/98 (34%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLED 201
             +Q+ + I  + L S    QG  +   +  +             +  +  +V+   LE 
Sbjct: 352 FSNQQSRAIGQVALASFANEQGLQQIGGTRWTETFSSGLPGIDEPKTGTLGSVESNALEA 411

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN N   E+ ++I     + +    I      M   I+
Sbjct: 412 SNVNLTQELVELIKAQSNYQANAKTISTESTIMQTIIQ 449


>gi|300870390|ref|YP_003785261.1| flagellar hook protein FlgE [Brachyspira pilosicoli 95/1000]
 gi|300688089|gb|ADK30760.1| flagellar hook protein, FlgE [Brachyspira pilosicoli 95/1000]
          Length = 441

 Score = 98.8 bits (244), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 33/152 (21%), Positives = 59/152 (38%), Gaps = 12/152 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-------- 52
           M  S   G++     + R+  V +N+SN +T GF+  +V F +++    +          
Sbjct: 1   MMRSLFAGVSGLQNHQTRMDVVGNNISNVNTYGFKKGRVTFKDMISQSLSGAAKPQEDRG 60

Query: 53  ----DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                Q    +           G+   TG   D A++G+ +F  +       TR+G F +
Sbjct: 61  GINPQQVGLGMQVATIDTIHTQGALQVTGVNTDLAIQGEGFFIEKKGNSSYYTRNGAFSI 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIF 140
             +G LV+ S  Y V    +V        E+ 
Sbjct: 121 DKNGYLVNPSNGYKVQGWNAVLNPETGMMELN 152



 Score = 73.7 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 16/122 (13%), Positives = 37/122 (30%), Gaps = 5/122 (4%)

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
              D  ++ +      +          +   K +  + L     + G  +  ++    + 
Sbjct: 316 IEQDGYTMGMLEGFSFDDSGQITGVFTNGNRKTLGQVALAKFANAGGLEKAGDTLFVESN 375

Query: 182 PPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                           ++K G LE SN +   +   MI   + F +    I   ++ + E
Sbjct: 376 NSGAANIGVAAAEGRGSIKAGTLEMSNVDLSEQFTDMIVTQRGFQANARTITTADQLLQE 435

Query: 237 AI 238
            I
Sbjct: 436 VI 437


>gi|16802724|ref|NP_464209.1| flagellar basal body rod protein FlgG [Listeria monocytogenes
           EGD-e]
 gi|224502013|ref|ZP_03670320.1| flagellar basal body rod protein FlgG [Listeria monocytogenes FSL
           R2-561]
 gi|16410071|emb|CAC98760.1| lmo0682 [Listeria monocytogenes EGD-e]
          Length = 259

 Score = 98.4 bits (243), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 86/251 (34%), Gaps = 16/251 (6%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV--------VGAIKNDID 53
                IG A  +   Q +   ++N++N  T GF+  ++    +         G +   + 
Sbjct: 1   MKGLYIGAAGMMNYMQHIQVHSNNVANAQTPGFKFDQLTSEVISRNKVNYQNGPVTRQVG 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFAL------EGDAWFALESPRGIILTRDGRFK 107
                V     +++   GS   T  + DF +      +G  +F       I L+R G+F 
Sbjct: 61  TIDYGVRPAATHINLTAGSSYITNRDRDFFMQDTDPTQGSNFFITAKNGEISLSRGGQFH 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
               G L +A G   +           +             ++  + +  +G   V  +Q
Sbjct: 121 SDQFGFLRTADGANLLSATGEAIQVGQKTSIRAEANGDLYNAETSQYLGRLGTKFVSANQ 180

Query: 168 G--FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225
               V+     +  N   T         ++ G +E SN +   EM Q++   +   +   
Sbjct: 181 ADSLVKDGEGRLHINGVNTMNLPAGQGIIQNGVIETSNVDLGIEMVQLMDNQRMVQASKN 240

Query: 226 LIDENEKSMLE 236
           +++  +K   +
Sbjct: 241 VVNMFDKVYDK 251


>gi|305432527|ref|ZP_07401689.1| flagellar hook protein [Campylobacter coli JV20]
 gi|304444566|gb|EFM37217.1| flagellar hook protein [Campylobacter coli JV20]
          Length = 545

 Score = 98.4 bits (243), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 42/217 (19%), Positives = 80/217 (36%), Gaps = 9/217 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI----KNDIDQKI 56
           M TSF  G++        +   A+N++N +T GF+    +F ++  +       +  Q  
Sbjct: 1   MMTSFYNGVSGVKTNSFGIDVYANNIANVNTTGFKYSDAQFKDIFYSTITTQSTNPAQGG 60

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLV 115
               +    +  E GS +++  E D AL+G  +F +    G    TR+G F+    G+LV
Sbjct: 61  YGSGAASSQVVFEQGSPVASEGEFDVALQGKGFFGVLGADGEAYYTRNGAFRRDAAGNLV 120

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
            + G + +  M      +   D +  +      +            +   + G    +  
Sbjct: 121 DSYGNFVLGTMNPAFAGVSYSDRVAGLMGDYLNTGTPVNSGFTVNSNDAFNIGTTASQGV 180

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQ 212
              P     P +    V    G L   N N+  E+ +
Sbjct: 181 IKVPVNMYLPPQVTQNVK-WSGSL---NTNATTEVVK 213



 Score = 73.0 bits (177), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 44/124 (35%), Gaps = 7/124 (5%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             D  +                    + K  ++  + LY+    QG V   ++  +    
Sbjct: 419 QQDGVAEGFFEQYNISDDGSIVAQFSNGKNAIVGKLALYNFINEQGLVAMGDNIFAATAN 478

Query: 183 P-------TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
                      + ++    K GFLE SN +   E+  +I   + F++ +  I  +++ + 
Sbjct: 479 SGDASFIMKDGQVINTAKFKGGFLEQSNVDLSAELSNLIVTQKAFDASSKSITTSDQMIQ 538

Query: 236 EAIR 239
           +AI 
Sbjct: 539 KAIN 542


>gi|307699899|ref|ZP_07636950.1| putative flagellar hook protein FlgE [Mobiluncus mulieris FB024-16]
 gi|307614937|gb|EFN94155.1| putative flagellar hook protein FlgE [Mobiluncus mulieris FB024-16]
          Length = 512

 Score = 98.4 bits (243), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 56/139 (40%), Gaps = 14/139 (10%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G++     +  L   ++N++N +T GF++   +F +    +            
Sbjct: 1   MLRSLFTGISGLSVHQTMLDVTSNNIANVNTTGFKSASTRFEDTFSQLVKSGATARLNER 60

Query: 49  -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
              +  Q    V       +   G+  +TG  LD  + GD +F L+   G  + TR+G F
Sbjct: 61  GGMNPAQVGLGVKLQSITNNFTGGAAQNTGRNLDTMINGDGFFVLKKTNGTQVYTRNGSF 120

Query: 107 KVTDDGSLVSASGKYPVLD 125
            +   G +V+A G +    
Sbjct: 121 GLDAKGQVVAADGSFVQGW 139



 Score = 76.4 bits (186), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 12/94 (12%), Positives = 32/94 (34%), Gaps = 5/94 (5%)

Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNAN 205
             + +  +   +     G  +   S    +      +     +     +  G +E SN +
Sbjct: 416 MSRAMGKIATAAFSNPLGLEKAGASYFVESGNSGQPQIGEPGSGSRGAMTGGAIEMSNVD 475

Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              E   +I   + F + T +I  +++ + E + 
Sbjct: 476 LAAEFTNLILSQRGFQANTRVITTSDEILQELVS 509


>gi|289433960|ref|YP_003463832.1| flagellar basal-body rod protein, putative [Listeria seeligeri
           serovar 1/2b str. SLCC3954]
 gi|315301915|ref|ZP_07872926.1| flagellar basal body rod protein FlgG [Listeria ivanovii FSL
           F6-596]
 gi|289170204|emb|CBH26744.1| flagellar basal-body rod protein, putative [Listeria seeligeri
           serovar 1/2b str. SLCC3954]
 gi|313629711|gb|EFR97833.1| flagellar basal body rod protein FlgG [Listeria ivanovii FSL
           F6-596]
 gi|313634394|gb|EFS00983.1| flagellar basal body rod protein FlgG [Listeria seeligeri FSL
           N1-067]
          Length = 259

 Score = 98.4 bits (243), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 43/252 (17%), Positives = 85/252 (33%), Gaps = 18/252 (7%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG---------AIKNDI 52
                IG A  +   Q +   ++N++N  T GF+  ++  SEV+           +   +
Sbjct: 1   MKGLYIGAAGMMNYMQHIQVHSNNVANAQTPGFKFDQLT-SEVISKNKVNYQNNPVAKQV 59

Query: 53  DQKISFVASGKEYLSKEVGSFISTGTELDFAL------EGDAWFALESPRGIILTRDGRF 106
                 V     +++   GS   T  + DF +      +G  +F       I L+R G+F
Sbjct: 60  GTIDYGVRPAATHINLTAGSSYITNRDRDFFMQDANPEQGSNFFITAKNGEISLSRGGQF 119

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
                G L +A G   +           +             ++    +  +G   V   
Sbjct: 120 HSDQFGFLRTADGANLLSATGEAVQVGVKTSIRAEANGALYNAETNAYLGRLGTRFVSAD 179

Query: 167 Q--GFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224
           Q     +     +  N   T         ++ G LE SN +   EM Q++   +   +  
Sbjct: 180 QVDNLAKDGEGRLHVNGTNTMNLPAGQGIIQNGVLETSNVDLGVEMVQLMDNQRMVQASK 239

Query: 225 TLIDENEKSMLE 236
            +++  +K   +
Sbjct: 240 NIVNMFDKVYDK 251


>gi|57169039|ref|ZP_00368167.1| flagellar hook protein flgE Cj0043 [Campylobacter coli RM2228]
 gi|57019584|gb|EAL56274.1| flagellar hook protein flgE Cj0043 [Campylobacter coli RM2228]
          Length = 545

 Score = 98.4 bits (243), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 42/217 (19%), Positives = 80/217 (36%), Gaps = 9/217 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI----KNDIDQKI 56
           M TSF  G++        +   A+N++N +T GF+    +F ++  +       +  Q  
Sbjct: 1   MMTSFYNGVSGVKTNSFGIDVYANNIANVNTTGFKYSDAQFKDIFYSTITTQSTNPAQGG 60

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLV 115
               +    +  E GS +++  E D AL+G  +F +    G    TR+G F+    G+LV
Sbjct: 61  YGSGAASSQVVFEQGSPVASEGEFDVALQGKGFFGVLGADGEAYYTRNGAFRRDAAGNLV 120

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
            + G + +  M      +   D +  +      +            +   + G    +  
Sbjct: 121 DSYGNFVLGTMNPAFAGVSYSDRVAGLMGDYLNTGTPVNSGFTVNSNDAFNIGTTASQGV 180

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQ 212
              P     P +    V    G L   N N+  E+ +
Sbjct: 181 IKVPVNMYLPPQVTQNVK-WSGSL---NTNATTEVVK 213



 Score = 73.0 bits (177), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 44/124 (35%), Gaps = 7/124 (5%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             D  +                    + K  ++  + LY+    QG V   ++  +    
Sbjct: 419 QQDGVAEGFFEQYNISDDGSIVAQFSNGKNAIVGKLALYNFINEQGLVAMGDNIFAATAN 478

Query: 183 P-------TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
                      + ++    K GFLE SN +   E+  +I   + F++ +  I  +++ + 
Sbjct: 479 SGDASFIMKDGQVINTAKFKGGFLEQSNVDLSAELSNLIVTQKAFDASSKSITTSDQMIQ 538

Query: 236 EAIR 239
           +AI 
Sbjct: 539 KAIN 542


>gi|168334552|ref|ZP_02692708.1| hypothetical protein Epulo_06138 [Epulopiscium sp. 'N.t. morphotype
           B']
          Length = 473

 Score = 98.4 bits (243), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 64/179 (35%), Gaps = 14/179 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++   + + ++  + +N++N +T+GF++ +V F++V                
Sbjct: 1   MMRSLFSGVSGLQSHQLKMDVIGNNIANVNTIGFKSQRVTFADVYYQTTQSATTANEMTG 60

Query: 54  -------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106
                  Q     +     +    GS   T    D  +E DA F +    G   TR G F
Sbjct: 61  LGGMNAMQIGLGTSVSSIDMLMTPGSAQRTDNPFDLMIEDDAMFIVSDATGTYYTRSGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +V + G+LV  +G       A+       +  + ++      +       T  +     
Sbjct: 121 RVDERGTLVIPNGMRVQGWPANEIGTEIMRGTVGDLKLNTPENNSADPQTTTDVNITGN 179



 Score = 79.9 bits (195), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 43/141 (30%), Gaps = 5/141 (3%)

Query: 100 LTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG 159
           LT+       D                      +    +I      G+I   G+V  T  
Sbjct: 334 LTQYDSITNLDPNMGTLDFNGAGKAAGEMQGFDVGTDGKITAYYSNGDIKLLGQVAVTY- 392

Query: 160 LYSVDMSQGFVRRENS-GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
               D   G  +  ++   S           +  +   G LE SN +   E  +MI   +
Sbjct: 393 ---FDNLAGLEKVADNVFKSTANSGDFDGVGAAGSFATGTLEMSNVDLSKEFTEMITTQR 449

Query: 219 KFNSITTLIDENEKSMLEAIR 239
            + + +  I  +++ + E I 
Sbjct: 450 GYQASSKTITTSDEMLQELIN 470


>gi|328948413|ref|YP_004365750.1| flagellar hook-basal body protein [Treponema succinifaciens DSM
           2489]
 gi|328448737|gb|AEB14453.1| flagellar hook-basal body protein [Treponema succinifaciens DSM
           2489]
          Length = 463

 Score = 98.4 bits (243), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 56/139 (40%), Gaps = 12/139 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S   G++     + R+  + +N+SN +T GF+  +  F +++    N   +      
Sbjct: 1   MMRSLYAGVSGLQNHQTRMDVIGNNISNVNTYGFKKGRATFQDMISQQINGAARPTEEVG 60

Query: 56  -------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                     ++          G+  +TG   D A++G+ +F L++      +R G F  
Sbjct: 61  GVNPKEVGLGMSVATIDTIFTQGNLQTTGNTTDLAIQGNGFFVLKNGDETFYSRAGVFGT 120

Query: 109 TDDGSLVSASGKYPVLDMA 127
             +G+LV+ +    V    
Sbjct: 121 DSNGTLVNPANGLRVQGWM 139



 Score = 73.4 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 15/91 (16%), Positives = 32/91 (35%), Gaps = 5/91 (5%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSM 207
           + I  + + S     G  ++ ++  + +I           T     +  G LE SN +  
Sbjct: 369 RTIGQVAMASFTNQGGLEKKGDNTYAESINSGMANIGESGTQGKGSMLSGTLEMSNVDLT 428

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            ++  MI   + F S    I   +  +   +
Sbjct: 429 EQLTDMIVTQRGFESNAKTIQTGDSMLETVL 459


>gi|34558065|ref|NP_907880.1| flagellar hook protein FlgE [Wolinella succinogenes DSM 1740]
 gi|34483783|emb|CAE10780.1| FLAGELLAR HOOK PROTEIN [Wolinella succinogenes]
          Length = 716

 Score = 98.0 bits (242), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 53/141 (37%), Gaps = 14/141 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50
           M  S   G++   A +  L    +N++N +T GF+  +  FS+++  +            
Sbjct: 1   MLRSLWSGVSGMQAHQVALDVEGNNIANVNTTGFKYSRANFSDMLSQVNRIATSPYGGLG 60

Query: 51  --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL--ESPRGIILTRDGRF 106
             +        +          GS   T  ++D A+ GD +F +     R    TRDG F
Sbjct: 61  GQNDYSIGLGTSINSTTKIFGQGSIQDTTNKMDLAIGGDGFFIVSGNGGRTNAYTRDGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMA 127
                G++V+ +G        
Sbjct: 121 GFDAAGNMVNNAGYIVQGWTR 141



 Score = 69.5 bits (168), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 11/90 (12%), Positives = 32/90 (35%), Gaps = 5/90 (5%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYE 209
           +A + + S   + G     ++  S                    +    LE SN +    
Sbjct: 624 LAQVAIASFTNNGGLQAEGSNLFSQTANSGEPVVGTAGSGGRGKISPSALEMSNVDLSRS 683

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           + Q+I + + F + +  +  +++ +   ++
Sbjct: 684 LTQLIVVQRGFQANSKTVTTSDQILNTLLQ 713


>gi|241766920|ref|ZP_04764726.1| flagellar basal body FlaE domain protein [Acidovorax delafieldii
           2AN]
 gi|241362624|gb|EER58472.1| flagellar basal body FlaE domain protein [Acidovorax delafieldii
           2AN]
          Length = 425

 Score = 98.0 bits (242), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 39/186 (20%), Positives = 69/186 (37%), Gaps = 3/186 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN--DIDQKISFVAS 61
           SF  GL+   A  + L  +  N++N +T GF+  + +F+E+V +       +     V +
Sbjct: 2   SFQQGLSGLNASSKNLDVIGHNIANANTTGFKASRAEFAEMVASAIGSAGGNNAGIGVET 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGK 120
                    G+   TG  LD A+ G+ +F L+ P      TR G FK+   G++V+    
Sbjct: 62  ANVAQQFTQGNLTITGNSLDVAINGNGFFTLQQPDGSPAYTRAGNFKLDKTGNMVTNDNA 121

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
             +         +        +          K    +       ++      N   +P 
Sbjct: 122 KVMGYPVDPLTGLRSGTAPVPMVFPTAEPIPAKQTTKIMAGFNLDARAPDAAGNPAATPP 181

Query: 181 IPPTPL 186
           IP TP 
Sbjct: 182 IPATPR 187



 Score = 79.1 bits (193), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 23/145 (15%), Positives = 45/145 (31%), Gaps = 10/145 (6%)

Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQK-----GKVIATMG 159
            F V  +   V+  G    +   +       +    NV   G I  +      +    + 
Sbjct: 279 TFPVDINLDKVTQFGTKFAVSDLTQDGYTAGELTGINVENNGMIMTRYSNGVTRAEGQLA 338

Query: 160 LYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMI 214
           L S   +QG      +                 D +   ++ G LEDSN +   E+  M+
Sbjct: 339 LASFRNTQGLAAVGGNNWVETFESGQPVLGTATDGNFGALRSGALEDSNVDLTAELVNMM 398

Query: 215 HLTQKFNSITTLIDENEKSMLEAIR 239
              + + +    I   ++ M   + 
Sbjct: 399 TAQRAYQANAQTIKTQDQVMSTLVN 423


>gi|95929857|ref|ZP_01312598.1| protein of unknown function DUF1078-like [Desulfuromonas
           acetoxidans DSM 684]
 gi|95134153|gb|EAT15811.1| protein of unknown function DUF1078-like [Desulfuromonas
           acetoxidans DSM 684]
          Length = 548

 Score = 98.0 bits (242), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 77/197 (39%), Gaps = 6/197 (3%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI---KNDIDQKISF 58
           Q+S   G++   A    L+ + +N++N++T+GF++ +  FS+++ A         Q    
Sbjct: 4   QSSLFSGVSGLNANGNALTVLGNNIANSNTIGFKSSRTIFSDLLSAEIAGSGGASQVGRG 63

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG--IILTRDGRFKVTDDGSLVS 116
                       G+F +T +  D A+EG  +F +  P    I  TR G F   + G+LV+
Sbjct: 64  AGLSTVDNIFSQGTFETTESNTDLAIEGPGFFMVSDPGEASIYYTRAGAFNFDETGTLVN 123

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
             G        +   +         +  +   S            +++ +  ++  +   
Sbjct: 124 PEGYAVQGYYLNDAGETVGDLTDLTIETR-SFSPANPTTKISLATNLNANDPYLGTQGDA 182

Query: 177 ISPNIPPTPLEDLSGVT 193
           +SP     P +  +  +
Sbjct: 183 VSPFDVNDPADTSNYAS 199



 Score = 84.5 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 17/143 (11%), Positives = 39/143 (27%), Gaps = 4/143 (2%)

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           T+              +       D  +    +    +          + + + +A + L
Sbjct: 403 TQAVDIIFDATQYSSESDVISQTQDGYATGTLVSLTVDNDGNILGNYSNGEPRKLARIAL 462

Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDL----SGVTVKRGFLEDSNANSMYEMGQMIHL 216
                  G  +  N+                      +    LE SN +   E  +MI  
Sbjct: 463 AKFSNPVGLAKAGNNLYEATDDSGTAIVGTVGSGVGKIFTNSLEMSNVDLAQEFVKMITT 522

Query: 217 TQKFNSITTLIDENEKSMLEAIR 239
            + F + + +I   ++ + E I 
Sbjct: 523 QRGFQANSKIITTTDELLGELIN 545


>gi|225849153|ref|YP_002729317.1| flagellar hook protein FlgE [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225643172|gb|ACN98222.1| flagellar hook protein FlgE [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 409

 Score = 98.0 bits (242), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 38/202 (18%), Positives = 75/202 (37%), Gaps = 15/202 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS--- 57
           M  SF   ++     ++ +  ++DN++N +T+GF++ +V F ++V               
Sbjct: 1   MLQSFYTAVSGLNGNQKWIDVISDNIANVNTIGFKSERVTFEDLVAKSLTTFANNTPKNM 60

Query: 58  ----FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDG 112
                            GSF +T   LD AL+G+ +F ++  +G    TR G+F++  +G
Sbjct: 61  EIGGGSFIALTTKDFSQGSFQNTVNPLDLALDGEGFFMVKDNQGTVYYTRAGQFRLDANG 120

Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172
            +V+  G             I    +  N+      S   K+       ++        R
Sbjct: 121 DIVNVDGMKLQGWKLDTAGNISAALDKINIPYSILPSITTKI-------NLVEPTNLDSR 173

Query: 173 ENSGISPNIPPTPLEDLSGVTV 194
            N+      P  P       ++
Sbjct: 174 VNTISGTIDPTNPATFNYANSM 195



 Score = 81.8 bits (200), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 47/122 (38%), Gaps = 3/122 (2%)

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
           Y   D  +    I        V      + K ++IA + + +    +  VR+ N+   PN
Sbjct: 285 YANQDGFAKGDLIGVSVSEDGVVRGMYSNGKVELIARLAVATFKDKEMLVRKGNNLYLPN 344

Query: 181 IPPTPLEDLSGV---TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                     G     V+ GFLE SN +   E   +I   + + +   +I  +++ + EA
Sbjct: 345 TQSFTPIITPGGILSKVRSGFLELSNVDISKEFINLITAQRAYQANARVITTDDQILQEA 404

Query: 238 IR 239
           + 
Sbjct: 405 MN 406


>gi|315654586|ref|ZP_07907492.1| flagellar hook protein FlgE [Mobiluncus curtisii ATCC 51333]
 gi|315491050|gb|EFU80669.1| flagellar hook protein FlgE [Mobiluncus curtisii ATCC 51333]
          Length = 487

 Score = 98.0 bits (242), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 63/169 (37%), Gaps = 14/169 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50
           M  S   G++     +  L   ++N++N +T GF++   +F +    +            
Sbjct: 1   MLRSLFTGISGLSVHQTMLDVTSNNIANVNTTGFKSASTRFEDTFSQLVRSGAAPRLNER 60

Query: 51  ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106
              +  Q    V       +   G+   TG  LD  + GD ++ L    G  + TR+G F
Sbjct: 61  GGMNPAQVGLGVKLQSITQNFTGGAAQMTGRNLDTMINGDGFYVLRKTNGTSVYTRNGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI 155
            V   G LV+A G +    M +    I       ++      + +GK  
Sbjct: 121 GVDAQGQLVAADGSFVQGWMGNEDGTINASGTPGHITLPLTKTVEGKPT 169



 Score = 81.1 bits (198), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 18/135 (13%), Positives = 44/135 (32%), Gaps = 10/135 (7%)

Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-----EISQKGKVIATMGLYSVDMSQGF 169
           ++  G         V   +      ++V   G       +   + +A + + S     G 
Sbjct: 350 MTGFGGVNNFGQKQVDGNMAGYMTGYSVEADGTIRGTFSNGDNRALARIAVASFANPLGL 409

Query: 170 VRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224
            +  +S           +     T     +  G +E SN +   E   +I   + F + +
Sbjct: 410 EKAGSSYFVETGNSGQPQIGEAGTGQRGAMTGGAIEMSNVDLAAEFTNLILSQRGFQANS 469

Query: 225 TLIDENEKSMLEAIR 239
            +I  +++ + E + 
Sbjct: 470 RVITTSDEILQELVN 484


>gi|229017058|ref|ZP_04173977.1| Flagellar basal-body rod protein flgG [Bacillus cereus AH1273]
 gi|229023239|ref|ZP_04179749.1| Flagellar basal-body rod protein flgG [Bacillus cereus AH1272]
 gi|228738033|gb|EEL88519.1| Flagellar basal-body rod protein flgG [Bacillus cereus AH1272]
 gi|228744231|gb|EEL94314.1| Flagellar basal-body rod protein flgG [Bacillus cereus AH1273]
          Length = 267

 Score = 98.0 bits (242), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 42/265 (15%), Positives = 84/265 (31%), Gaps = 25/265 (9%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53
                IG    +   QR++  ++N++N  T GF+   +        +          +I 
Sbjct: 1   MNGLYIGSMGMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGSTTNIG 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDA-----WFALESPRGIILTRDGRFKV 108
                V     +++   G+   T +  DF L+        +F         LTRDG F +
Sbjct: 61  SVDYAVVPAATHVNLVQGNIQMTNSATDFFLDDGTAGTTSFFVTSKNDETFLTRDGSFTI 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV----- 163
             D  L ++SG Y +             D   +   +         +    +  +     
Sbjct: 121 NSDRYLQTSSGAYVMDVNNERIRIPENVDFFVSNNGEIYREVNDGTLQKPDIKRIVIAQL 180

Query: 164 -------DMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
                  + +   ++REN   +               VK   LE+SN +   EM  ++  
Sbjct: 181 QTKTVDAEANARLMQRENKSFTLAEGNIADLPNGTGAVKNHMLENSNVDMTKEMADLMTS 240

Query: 217 TQKFNSITTLIDENEKSMLEAIRNI 241
            +   +   ++   +K   +    I
Sbjct: 241 QKMIQASQRVMTSFDKIYEKEANEI 265


>gi|206889889|ref|YP_002248123.1| flagellar hook protein FlgE [Thermodesulfovibrio yellowstonii DSM
           11347]
 gi|206741827|gb|ACI20884.1| flagellar hook protein FlgE [Thermodesulfovibrio yellowstonii DSM
           11347]
          Length = 434

 Score = 98.0 bits (242), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 38/161 (23%), Positives = 63/161 (39%), Gaps = 3/161 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID--QKISF 58
           M TS   G++   A    LS + DN++N +TVGF+  +  F++++          Q    
Sbjct: 1   MLTSLFTGISGLNANGLALSVIGDNIANANTVGFKASRANFADILSQTLGGASAMQVGRG 60

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSA 117
                       G+  +T   LD A+EGD +F ++ P      TR G+F+V  DG +V  
Sbjct: 61  TMIIDIQKLFTQGTLETTSNPLDLAIEGDGFFVVQQPNGPTYYTRAGQFRVNKDGYIVDP 120

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158
           +G         V   +        +           +I T 
Sbjct: 121 NGYLLQAYQMDVNGNVTGAIGNVYLAGLMSDPSATDLITTQ 161



 Score = 71.8 bits (174), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 16/87 (18%), Positives = 30/87 (34%), Gaps = 4/87 (4%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQ 212
           K +A   L  V  +       + G +   P      +    V    LE SN +   E  +
Sbjct: 349 KFVAAHNLTKVGNNLYLESYASGGPTYGAPG----TVGVGKVYANSLEASNVDLAEEFIR 404

Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIR 239
           MI   + + +   +I   +  + E + 
Sbjct: 405 MIAAQRAYQANVRVITTTDNMLNELMN 431


>gi|332669198|ref|YP_004452206.1| flagellar hook-basal body protein [Cellulomonas fimi ATCC 484]
 gi|332338236|gb|AEE44819.1| flagellar hook-basal body protein [Cellulomonas fimi ATCC 484]
          Length = 392

 Score = 98.0 bits (242), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 52/145 (35%), Gaps = 12/145 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA------------I 48
           M  S   G++   + +  L    +N++N +T GF++ + +F + +               
Sbjct: 1   MLRSLFSGISGLRSHQTMLDVTGNNIANVNTTGFKSSQTQFQDTLSQMLQNGGGAQDGVG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
             +  Q    V       +   G+   TG   D  ++GD +F +        TR G F  
Sbjct: 61  GTNPAQVGLGVRVAGITTNFTQGASQMTGRSTDMMIQGDGFFVVRKGAESYYTRAGSFDF 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQI 133
              G +V       V   A+V   +
Sbjct: 121 DSTGQMVLPGEGALVQGWAAVNGVV 145



 Score = 82.2 bits (201), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 34/92 (36%), Gaps = 5/92 (5%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLEDSNANSM 207
           + I  + + S     G  +   S    ++        P       T+  G LE SN +  
Sbjct: 298 QTIGRLAIGSFTNPSGLEKAGGSLFRTSVNSGDPQVGPAGTGGRGTLAGGALEMSNVDLS 357

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            E   +I   + F + + +I  +++ + E + 
Sbjct: 358 SEFTSLIIAQRGFQANSRVITTSDEVLQELVN 389


>gi|320529447|ref|ZP_08030535.1| putative flagellar hook protein FlgE [Selenomonas artemidis F0399]
 gi|320138413|gb|EFW30307.1| putative flagellar hook protein FlgE [Selenomonas artemidis F0399]
          Length = 681

 Score = 98.0 bits (242), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/148 (20%), Positives = 57/148 (38%), Gaps = 13/148 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++     + R+  + +N++N +T GF+  +V F++++    +          
Sbjct: 1   MMRSMFSGVSGLKGHQTRMDVIGNNIANVNTTGFKASRVTFADMISQNLSGASAPQGTIG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFAL-EGDAWFALESPRGIILTRDGRFK 107
                Q    ++     L    GS  STG   D A+  GD  F +        TR+G F+
Sbjct: 61  GVNPKQIGLGMSVASTDLLYTNGSVQSTGKNTDIAISRGDGLFVVSRGEQKYYTRNGAFE 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQ 135
               G+L   S    V    +   ++  
Sbjct: 121 FDAAGNLTIPSTGLYVQGYMATDGRVTP 148



 Score = 74.5 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 12/88 (13%), Positives = 28/88 (31%), Gaps = 4/88 (4%)

Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKR----GFLEDSNANSMYEMG 211
           A + +   +   G  +   +    +             +        LE SN +   +  
Sbjct: 591 AQIAMAQFNNPSGLTKMGGNLYQESNNSGTRTISGAADIGSELTTSALEMSNVDIADQFS 650

Query: 212 QMIHLTQKFNSITTLIDENEKSMLEAIR 239
            MI   + F S + +I  +++ +   I 
Sbjct: 651 DMIITQRGFQSNSKIITVSDEMLETLIN 678


>gi|222824502|ref|YP_002576076.1| flagellar hook protein FlgE [Campylobacter lari RM2100]
 gi|222539723|gb|ACM64824.1| flagellar hook protein FlgE [Campylobacter lari RM2100]
          Length = 541

 Score = 98.0 bits (242), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 46/192 (23%), Positives = 78/192 (40%), Gaps = 8/192 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----DIDQKI 56
           M T+F  G+    +    +   A N+SN +TVGF+   V F +V  +       +  Q  
Sbjct: 1   MFTAFYNGVNGVKSQSYGIDNTAHNISNVNTVGFKYSDVAFKDVFYSTVTTQSYNKGQTG 60

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVS 116
               +G      E G  ++T  E D A+ G  +F + +  GI  TR+G F+   +G+LV 
Sbjct: 61  YGSVAGATNDVFEQGPLVATDHEFDVAIAGKGFFGVSNGNGIYYTRNGAFRPDANGNLVD 120

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD----MSQGFVRR 172
           A+G Y +  M     +I   D + N+  +    +    I      +       +QG +  
Sbjct: 121 ANGNYVLGTMNPSLQEIQLSDRVSNIFGQQLGQKVTTAITGKPNENFQIGGVNTQGPISV 180

Query: 173 ENSGISPNIPPT 184
             +   P  P  
Sbjct: 181 PKNLYLPPQPTQ 192



 Score = 69.9 bits (169), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 18/126 (14%), Positives = 39/126 (30%), Gaps = 7/126 (5%)

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
           +   D                       + +   +A + L++    QG  +   +     
Sbjct: 413 HTQTDGKGEGFLNNYAINTDGTIIATFTNGEQIPMAKLALFNFTNEQGLEKLGENLYGQT 472

Query: 181 IPP-------TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
                         + S  T K  +LE SN +       +I L + ++S +  I   ++ 
Sbjct: 473 GNSGNPTFLLDANGNFSTATFKGSYLEQSNVDLSVAFTNLITLQKAYDSSSKSITTADQM 532

Query: 234 MLEAIR 239
           + +AI 
Sbjct: 533 IQKAIN 538


>gi|291280096|ref|YP_003496931.1| flagellar hook protein FlgE [Deferribacter desulfuricans SSM1]
 gi|290754798|dbj|BAI81175.1| flagellar hook protein FlgE [Deferribacter desulfuricans SSM1]
          Length = 817

 Score = 98.0 bits (242), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 65/179 (36%), Gaps = 14/179 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-------- 52
           M  S   G+      ++ +  + +N++N +TVG++T ++ F +++    +          
Sbjct: 1   MLRSLYAGITGLNEHQKSMDVIGNNIANVNTVGYKTSRIVFQDLLFQTISGGKAPAGNLG 60

Query: 53  ----DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF--ALESPRGIILTRDGRF 106
                Q  +  ++         G+  +TG   D A++G+ +F    E+      TR G F
Sbjct: 61  GINPKQIGTGTSTASVDTIFTQGTLQNTGVTTDMAIQGNGFFVVRSENENENYYTRAGNF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
               DG LV+  G      MA         +   +  +           AT  +  V  
Sbjct: 121 TFDKDGYLVTPDGFIVQGWMADADTGEILTNTEVSDIQLSSAYTSVPAKATTEVSLVGN 179



 Score = 77.2 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 14/90 (15%), Positives = 35/90 (38%), Gaps = 5/90 (5%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSNANSMYE 209
           IA +G+      +G ++  ++  +                   ++    LE+SN +   E
Sbjct: 725 IAQVGIAIFTNQEGLLKVGDTLFAETPNSGQAAVGQATTGGRGSIAASALENSNVDLARE 784

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              MI   + F + + +I  +++ + E + 
Sbjct: 785 FVNMITTQRGFQANSRVITTSDELLQELMN 814


>gi|296133040|ref|YP_003640287.1| fagellar hook-basal body protein [Thermincola sp. JR]
 gi|296031618|gb|ADG82386.1| fagellar hook-basal body protein [Thermincola potens JR]
          Length = 419

 Score = 98.0 bits (242), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 64/195 (32%), Gaps = 17/195 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++     + R+  + +N++N +T+G++  +  F +++               
Sbjct: 1   MMRSMFAGVSGLRNHQVRMDVIGNNIANVNTIGYKKARATFQDILSQNIRGASSPTATRG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                Q    +           GS  +TG   D  ++GD +F +        TR G F  
Sbjct: 61  GTNPMQVGLGMTINTIDTIHTQGSSETTGKVTDMMVDGDGFFIVGDGTNRFYTRAGNFDF 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
              G+L++ SG      MA     I     I      G    KG+ I      +      
Sbjct: 121 DAVGNLINTSGLLVQGWMADSQGNIDTTVAI-----SGIKIPKGQSIQPKATENATFVNN 175

Query: 169 FVRRENSGISPNIPP 183
                    +   PP
Sbjct: 176 LDAGTPQYDNTVTPP 190



 Score = 78.8 bits (192), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 38/93 (40%), Gaps = 5/93 (5%)

Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANS 206
            K +A + L + +   G ++   +  + +      +  +  T     +  G LE SN + 
Sbjct: 324 TKQLAQVALANFNNPAGLMKVGGNLFTQSNNSGNAQIGAAGTGGRGEISPGKLEMSNVDL 383

Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             E   MI   + F + + +I  +++ + E + 
Sbjct: 384 SQEFTDMIITQRGFQANSRIITVSDEMLQELVN 416


>gi|126653432|ref|ZP_01725528.1| flagellar basal-body rod protein [Bacillus sp. B14905]
 gi|126589788|gb|EAZ83921.1| flagellar basal-body rod protein [Bacillus sp. B14905]
          Length = 210

 Score = 97.6 bits (241), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 46/211 (21%), Positives = 82/211 (38%), Gaps = 20/211 (9%)

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFAL------------EGDAWFALESPR 96
            N +    +     +   +   G   ST    D AL             G  +F L  P 
Sbjct: 1   MNQVGALNTGTYLQETLPNYIQGQIYSTDFTTDMALIDGNLPQNEDGVSGSIFFRLAHPD 60

Query: 97  G-IILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI 155
           G    TR+G F +   G LV+  G Y + D      +I   ++ F + E G I    + +
Sbjct: 61  GGEAYTRNGNFTLDGQGYLVNGQGLYVLNDAGQ---RIQLPNDDFRLDESGAIYVNNQQV 117

Query: 156 ATMGLYSVDMSQGFVRRENSGISP----NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMG 211
           A +G+          +++N  I      N+P     +    T+++ FLE SN +S   M 
Sbjct: 118 ARVGVSYAANPNMLQKQDNGLIRTENGVNLPSAYGANGVSFTLRQNFLEGSNVDSGRAMT 177

Query: 212 QMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            ++   + F +   ++   ++SM +A+  I 
Sbjct: 178 DLMTAYRAFEANQKVLQAYDRSMEKAVNEIG 208


>gi|229189870|ref|ZP_04316880.1| Flagellar basal-body rod protein flgG [Bacillus cereus ATCC 10876]
 gi|228593544|gb|EEK51353.1| Flagellar basal-body rod protein flgG [Bacillus cereus ATCC 10876]
          Length = 267

 Score = 97.6 bits (241), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 42/265 (15%), Positives = 84/265 (31%), Gaps = 25/265 (9%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53
                IG    +   QR++  ++N++N  T GF+   +        +          +I 
Sbjct: 1   MNGLYIGSMGMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIG 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDF-----ALEGDAWFALESPRGIILTRDGRFKV 108
                V     +++   G+   T +  DF     A    ++F         LTRDG F +
Sbjct: 61  SVDYAVVPAATHVNLVQGNIQMTNSATDFFLDDGAAGTTSFFVTSKNDETFLTRDGSFTL 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV----- 163
             D  L ++SG Y +             +   +   +         +    +  +     
Sbjct: 121 NSDRYLQTSSGAYVMDVNNERIRIPENVEFFVSNNGEIYREVNDGTLQKPDIKRIVIAQL 180

Query: 164 -------DMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
                  + +   V+REN   +               VK   LE+SN +   EM  ++  
Sbjct: 181 QTKTVDAETNARLVQRENKSFTLAEGNIANLPNGTGIVKNHMLENSNVDMTKEMADLMTD 240

Query: 217 TQKFNSITTLIDENEKSMLEAIRNI 241
            +   +   ++   +K   +    I
Sbjct: 241 QKMIQASQRVMTSFDKIYEKEANEI 265


>gi|223038348|ref|ZP_03608642.1| flagellar hook protein FlgE [Campylobacter rectus RM3267]
 gi|222880205|gb|EEF15292.1| flagellar hook protein FlgE [Campylobacter rectus RM3267]
          Length = 784

 Score = 97.6 bits (241), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 62/189 (32%), Gaps = 18/189 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50
           M  S   G+    A +  +    +N++N +TVGF+  +  F +++               
Sbjct: 1   MMRSLWAGVTGLQAHQIAMDVEGNNIANVNTVGFKYSRANFDDLIYQTSRIATGPQNRHG 60

Query: 51  --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106
             +  Q    V +       + GS  +T  + D AL+GD +F +     +    TR+G F
Sbjct: 61  GVNSMQVGLGVQTNSTTRIFKQGSLQTTDKQTDIALQGDGFFMVSPDGGKTTYYTRNGDF 120

Query: 107 KVTDDGSLVSASGKYPVLDMA----SVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162
                G+ V   G      M               +I         ++    IA  G   
Sbjct: 121 SRDSVGNFVDNGGNIVQGWMRDEVTGEIDPTRPIGDIKIPSGLTVPARATTNIALKGNLD 180

Query: 163 VDMSQGFVR 171
                G  +
Sbjct: 181 SGNDVGNKK 189



 Score = 73.0 bits (177), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 21/203 (10%), Positives = 57/203 (28%), Gaps = 6/203 (2%)

Query: 43  EVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTR 102
            +V  +            +             S  T    ++   A       + I L  
Sbjct: 580 TMVIQVAEPNRINPDGEPANVITGYVRFNPDGSLATYSPASITFGAQNGSAGGQHIELKL 639

Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ-KGKVIATMGLY 161
               ++    S  + S    +        ++       +    G  +  +   +A +G+ 
Sbjct: 640 GTTAQMDGLASTDNDSSTADISQDGYASGELNGIRIDQSGTLVGSFTNGRSLGLAQVGVA 699

Query: 162 SVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
               ++G      +  S             +      +    LE SN +    + Q+I +
Sbjct: 700 KFSNNEGLSSEGGNLFSRTANSGDPVIGAAQTAGRGKISSSSLEMSNVDLSRSLTQLIVV 759

Query: 217 TQKFNSITTLIDENEKSMLEAIR 239
            + F + +  I  +++ +   ++
Sbjct: 760 QRGFQANSKTITTSDEMLNTLLQ 782


>gi|1184296|gb|AAA87351.1| flagellar hook protein [Borrelia burgdorferi]
          Length = 442

 Score = 97.6 bits (241), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 54/139 (38%), Gaps = 12/139 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++     +  +  V +N++N +T+GF+  +V F +++    +          
Sbjct: 1   MMRSLYSGVSGLQNHQTIMDVVGNNIANVNTIGFKKGRVNFQDMISQSISGASRPTDARG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                Q    +           G+F ST    D  + G+ +F L+  + +  TR G F V
Sbjct: 61  GTNPKQVGLGMNVASIDTIHTQGAFQSTQKASDLGVSGNGFFILKEGKNLFYTRAGAFYV 120

Query: 109 TDDGSLVSASGKYPVLDMA 127
             D  LV+ +    +    
Sbjct: 121 DSDRHLVNPANGMRIQGWM 139



 Score = 78.4 bits (191), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 46/141 (32%), Gaps = 5/141 (3%)

Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
           G +  +      S+S K  + D   +      + +   V      +   + +  + L S 
Sbjct: 299 GSYTDSITQFADSSSTKAIIQDGYGMGYMENYEIDQNGVIVGIYSNGIRRDLGKIALASF 358

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQ 218
               G  +  ++          +            ++ G LE +N +   +   MI   +
Sbjct: 359 MNPGGLAKSGDTNFVETSNSGQVRIGETGLAGLGDIRSGVLEMANVDLAEQFTDMIVTQR 418

Query: 219 KFNSITTLIDENEKSMLEAIR 239
            F +    I  +++ + E +R
Sbjct: 419 GFQANAKTITTSDQLLQELVR 439


>gi|157738173|ref|YP_001490857.1| flagellar distal rod protein FlgG [Arcobacter butzleri RM4018]
 gi|157700027|gb|ABV68187.1| flagellar distal rod protein FlgG [Arcobacter butzleri RM4018]
          Length = 239

 Score = 97.6 bits (241), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 51/254 (20%), Positives = 93/254 (36%), Gaps = 31/254 (12%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTI---KVKFSEVVGAIKNDIDQK-- 55
           M        A+ +    RL  +++N++N +T+GF+     +  F+  +  +++       
Sbjct: 1   MNQGVYPLAASMINQINRLDQISNNLANVNTLGFKQEGTTETTFNYYLDKMESQQKLMLK 60

Query: 56  -----ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFKV 108
                 +       Y + E+G  + TG  LDFAL     F         I+ TRDG FK 
Sbjct: 61  ESVVTNNIPKIDSRYTNAEMGPIVMTGNSLDFALNEPDTFFKIQNENGDIVYTRDGAFK- 119

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
             DG LV ++G             +   +E   V +  E            L  +  +  
Sbjct: 120 NLDGFLVDSNGNNV----------LNADNEAIVVEDGFESQIGVAKTPYTNLEKMGDNTY 169

Query: 169 FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228
            V+        N+      + +   + RG +E SN NS+  M ++I   ++F+     I 
Sbjct: 170 LVK--------NVDEAEQIENNDGRIVRGAVEQSNVNSVTAMVELIDAHRRFDQSQRAIK 221

Query: 229 ENEKSMLEAIRNIA 242
             +      I  + 
Sbjct: 222 TIDDLNAGLIEKVG 235


>gi|207092742|ref|ZP_03240529.1| flagellar hook protein FlgE [Helicobacter pylori HPKX_438_AG0C1]
          Length = 646

 Score = 97.6 bits (241), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 66/197 (33%), Gaps = 15/197 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G+    A +  L   ++N++N +T GF+  +  F +++  +            
Sbjct: 1   MLRSLWSGVNGMQAHQIALDIESNNIANVNTTGFKYSRASFVDMLSQVKLIATAPYKNGL 60

Query: 49  -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGR 105
              +       V           G+  +T  + D A++GD +F +   RGI    TRDG 
Sbjct: 61  AGQNDFSVGLGVGVDATTKIFSQGNIQNTDVKTDLAIQGDGFFIISPDRGITRNFTRDGE 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           F     GSLV+  G      + +      +  +   +        +   I    +     
Sbjct: 121 FLFDSQGSLVTTGGLVVQGWVRNGSDTGNKGSDTDALKVDNTGPLENIRIDPGMVMPARA 180

Query: 166 SQGFVRRENSGISPNIP 182
           S     R N     +  
Sbjct: 181 SNRISMRANLNAGRHAD 197


>gi|11386808|sp|P57423|FLGF_BUCAI RecName: Full=Flagellar basal-body rod protein flgF
 gi|25403600|pir||F84969 flagellar basal-body rod protein flgF [imported] - Buchnera sp.
           (strain APS)
 gi|10039012|dbj|BAB13046.1| flagellar basal-body rod protein flgF [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
          Length = 244

 Score = 97.6 bits (241), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 86/242 (35%), Gaps = 16/242 (6%)

Query: 11  AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
           A   L ++ S +++N++N  T GF+  K  F+       N  +   S     KEY +   
Sbjct: 3   AANQLLEKQSIISNNLANISTTGFK-EKFIFA---IQNHNVKNLYNSDKKITKEYYNLSP 58

Query: 71  GSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASV 129
           G    TG  LD  ++ D W  ++        T++G  K+     L     +    +   +
Sbjct: 59  GILRYTGRNLDLFIKDDGWLTVKDTNGQEAYTKNGHLKINSKRKLTIQDNEVIGNNCNII 118

Query: 130 PIQIPQKDEIFNVGEKGEISQKGKVIAT----------MGLYSVDMSQGFVRRENSGISP 179
             +      + N       ++   ++ T               +    G    + +    
Sbjct: 119 IPKNIILKILSNGVITSVKNKHKHIVETKIGSLKLVQLPSQDLIQNENGLFYLKKNNEIN 178

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
                 ++    + V+ G LE+SN N+   M +MI   ++F     +I   +++   A  
Sbjct: 179 KKHTNTIKHSKKIRVQSGMLEESNVNASKNMIEMISNARQFEMQMKMISMCDQNAEYA-N 237

Query: 240 NI 241
            +
Sbjct: 238 QL 239


>gi|15645489|ref|NP_207664.1| flagellar hook protein FlgE [Helicobacter pylori 26695]
 gi|2506418|sp|P50610|FLGE_HELPY RecName: Full=Flagellar hook protein flgE
 gi|2313997|gb|AAD07911.1| flagellar hook (flgE) [Helicobacter pylori 26695]
          Length = 718

 Score = 97.6 bits (241), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 66/197 (33%), Gaps = 15/197 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G+    A +  L   ++N++N +T GF+  +  F +++  +            
Sbjct: 1   MLRSLWSGVNGMQAHQIALDIESNNIANVNTTGFKYSRASFVDMLSQVKLIATAPYKNGL 60

Query: 49  -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGR 105
              +       V           G+  +T  + D A++GD +F +   RGI    TRDG 
Sbjct: 61  AGQNDFSVGLGVGVDATTKIFSQGNIQNTDVKTDLAIQGDGFFIISPDRGITRNFTRDGE 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           F     GSLV+  G      + +      +  +   +        +   I    +     
Sbjct: 121 FLFDSQGSLVTTGGLVVQGWVRNGSDTGNKGSDTDALKVDNTGPLENIRIDPGMVMPARA 180

Query: 166 SQGFVRRENSGISPNIP 182
           S     R N     +  
Sbjct: 181 SNRISMRANLNAGRHAD 197



 Score = 71.1 bits (172), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 14/128 (10%), Positives = 40/128 (31%), Gaps = 5/128 (3%)

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           +       +       +  + +   V      + +   +A + L +     G      + 
Sbjct: 588 SETYAIEQNGYQAGDLMDVRFDSDGVLLGAFSNGRTLALAQVALANFANDAGLQALGGNV 647

Query: 177 ISPNIPPTPLEDLSGVTVKRGF-----LEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
            S           +  T +RG      LE SN +    +  +I + + F + +  +  ++
Sbjct: 648 FSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQRGFQANSKAVTTSD 707

Query: 232 KSMLEAIR 239
           + +   + 
Sbjct: 708 QILNTLLN 715


>gi|217034494|ref|ZP_03439905.1| hypothetical protein HP9810_873g10 [Helicobacter pylori 98-10]
 gi|216943035|gb|EEC22514.1| hypothetical protein HP9810_873g10 [Helicobacter pylori 98-10]
          Length = 718

 Score = 97.2 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 66/197 (33%), Gaps = 15/197 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G+    A +  L   ++N++N +T GF+  +  F +++  +            
Sbjct: 1   MIRSLWSGVNGMQAHQIALDIESNNIANVNTTGFKYSRASFVDMLSQVKLIATAPYKNGL 60

Query: 49  -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGR 105
              +       V           G+  +T  + D A++GD +F +   RGI    TRDG 
Sbjct: 61  AGQNDFSVGLGVGVDATTKIFSQGNIQNTDVKTDLAIQGDGFFIISPDRGITRNFTRDGE 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           F     GSLV+  G      + +      +  +   +        +   I    +     
Sbjct: 121 FLFDSQGSLVTTGGLVVQGWVRNGSDTGNKGSDTDALKVDNTGPLENIRIDPGMVMPARA 180

Query: 166 SQGFVRRENSGISPNIP 182
           S     R N     +  
Sbjct: 181 SNRISMRANLNAGRHAD 197



 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 14/128 (10%), Positives = 40/128 (31%), Gaps = 5/128 (3%)

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           +       +       +  + +   V      + +   +A + L +     G      + 
Sbjct: 588 SETYAIEQNGYQAGDLMDVRFDSDGVLLGAFSNGRTLALAQVALANFANDAGLQALGGNV 647

Query: 177 ISPNIPPTPLEDLSGVTVKRGF-----LEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
            S           +  T +RG      LE SN +    +  +I + + F + +  +  ++
Sbjct: 648 FSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQRGFQANSKAVTTSD 707

Query: 232 KSMLEAIR 239
           + +   + 
Sbjct: 708 QILNTLLN 715


>gi|160896079|ref|YP_001561661.1| flagellar basal body FlaE domain-containing protein [Delftia
           acidovorans SPH-1]
 gi|160361663|gb|ABX33276.1| flagellar basal body FlaE domain protein [Delftia acidovorans
           SPH-1]
          Length = 423

 Score = 97.2 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/193 (19%), Positives = 66/193 (34%), Gaps = 7/193 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN--DIDQKISFVAS 61
            F  GL+   A  + L  +  N++N +T GF++ + +F+E V +             V  
Sbjct: 2   GFQQGLSGLNAASKNLDVIGHNIANANTTGFKSSRAEFAEAVASAVGSASGQNSGIGVNV 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGK 120
                    G   +TG  LD A+ G+ +F +  P      TR G F +   G+L +  G 
Sbjct: 62  AAVTQQFRQGPITTTGNNLDVAINGNGFFVVRQPDGSTAYTRAGNFGLDKQGNLKTVQGD 121

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
             +               +        +   G+ IA      +D+S     R       +
Sbjct: 122 NVMGYPVDATT----GKVLAGGQPVPMVFPSGQPIAAKTTTKIDVSLNLDARATPAAGNS 177

Query: 181 IPPTPLEDLSGVT 193
               P+      T
Sbjct: 178 TATPPVPATPRAT 190



 Score = 79.1 bits (193), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 14/89 (15%), Positives = 32/89 (35%), Gaps = 5/89 (5%)

Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEM 210
             + L +   +QG     ++         P      E  +  +++ G LEDSN +   E+
Sbjct: 333 GQLALAAFTNTQGLGAVGDNKWVETSDSGPALNGTAESGTFGSLRSGALEDSNVDLTAEL 392

Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             M+   + + +    I   ++     + 
Sbjct: 393 VNMMTAQRAYQANAQTIKTQDQVFSTLVN 421


>gi|188997539|ref|YP_001931790.1| protein of unknown function DUF1078 domain protein
           [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188932606|gb|ACD67236.1| protein of unknown function DUF1078 domain protein
           [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 413

 Score = 97.2 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/162 (21%), Positives = 67/162 (41%), Gaps = 8/162 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV-------VGAIKNDID 53
           M  SF   +      +Q L+ ++DN++N +T+GF++ +V F ++                
Sbjct: 1   MLQSFYTAITGLNGNQQWLNVISDNIANVNTIGFKSERVTFEDLVAHSLTTFANNTPKNT 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDG 112
           +                GSF++T +  D AL+G+ +F ++  +G    TR G+F++  +G
Sbjct: 61  EIGGGSFVALTTKDFSQGSFMNTNSPTDLALDGEGFFMVKDNQGTVYYTRAGQFRLDANG 120

Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV 154
            LV+  G             I    +  NV      +   K+
Sbjct: 121 DLVNVDGMKLQGWTLDNNGNIAGALDKINVPYAINPTITTKI 162



 Score = 78.4 bits (191), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 46/122 (37%), Gaps = 3/122 (2%)

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
           Y   D  +    +        + +    +   K IA + + +    +  VR+ N+   PN
Sbjct: 289 YANQDGFAKGDLLGVAVTEDGIVKGMYSNGNVKNIARLAVATFKDKEMLVRKGNNLYLPN 348

Query: 181 IPPTPLEDLSGV---TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                     G     V+ GFLE SN +   E   +I   + + +   +I  +++ + EA
Sbjct: 349 TQTFTPIITPGGILSKVRSGFLELSNVDISREFINLITAQRAYQANARVITTDDQILQEA 408

Query: 238 IR 239
           + 
Sbjct: 409 MN 410


>gi|146281772|ref|YP_001171925.1| flagellar basal-body rod protein FlgF [Pseudomonas stutzeri A1501]
 gi|145569977|gb|ABP79083.1| flagellar basal-body rod protein FlgF [Pseudomonas stutzeri A1501]
          Length = 203

 Score = 97.2 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 46/199 (23%), Positives = 80/199 (40%), Gaps = 4/199 (2%)

Query: 47  AIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGR 105
            +  D      +  S +       G+   TG +LD A+EG+ W A+++P       R G 
Sbjct: 2   QVFGDSYPARVYAMSERPGTDFTAGALQETGRDLDVAIEGEGWVAVQAPDGNEAYVRTGS 61

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEIS---QKGKVIATMGLYS 162
             +   G L +A G   + +   + I   +K +I + G     +       V+    L  
Sbjct: 62  LNIDALGMLRTADGMPVLGNGGPIAIPPEEKLDIGHDGTISIRALGEDPNVVVTVDRLKL 121

Query: 163 VDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222
           V+     + +   G+       PLE  + V V  GFLE SN N++ EM  M+ L+++F  
Sbjct: 122 VNPDPQQLEKGTDGLIRMKDGQPLEADANVRVTSGFLEASNVNAVAEMTSMLALSRQFEL 181

Query: 223 ITTLIDENEKSMLEAIRNI 241
              ++   E       R +
Sbjct: 182 HVKMMRTAEDDAAAMARVL 200


>gi|229102371|ref|ZP_04233079.1| Flagellar basal-body rod protein flgG [Bacillus cereus Rock3-28]
 gi|228681018|gb|EEL35187.1| Flagellar basal-body rod protein flgG [Bacillus cereus Rock3-28]
          Length = 267

 Score = 97.2 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 42/265 (15%), Positives = 84/265 (31%), Gaps = 25/265 (9%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53
                IG    +   QR++  ++N++N  T GF+   +        +          +I 
Sbjct: 1   MNGLYIGSMGMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAMTNIG 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDF-----ALEGDAWFALESPRGIILTRDGRFKV 108
                V     +++   G+   T +  DF     A    ++F         LTRDG F +
Sbjct: 61  SVDYAVVPAATHVNLVQGNVQITNSATDFFLDDGAAGTSSFFVTSKNDETFLTRDGSFTL 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV----- 163
             D  L ++SG Y +             +   +   +         +    +  +     
Sbjct: 121 NSDRYLQTSSGAYVMDVNNERIRIPENVNFFVSNNGEIYREINEGTLQKPDIKRIVIAQL 180

Query: 164 -------DMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
                  + +   V+REN   +               VK   LE+SN +   EM  ++  
Sbjct: 181 QTKTVDAETNARLVQRENKSFTLAEGNIANLPNGTGIVKDHMLENSNVDMTKEMADLMSS 240

Query: 217 TQKFNSITTLIDENEKSMLEAIRNI 241
            +   +   ++   +K   +    I
Sbjct: 241 QKMIQASQRIMTSFDKIYEKEANEI 265


>gi|332296627|ref|YP_004438550.1| flagellar hook-basal body protein [Thermodesulfobium narugense DSM
           14796]
 gi|332179730|gb|AEE15419.1| flagellar hook-basal body protein [Thermodesulfobium narugense DSM
           14796]
          Length = 559

 Score = 97.2 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 73/204 (35%), Gaps = 12/204 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  + +  ++     +  +  + +N++N +T+GF+   V FS+++    +      + + 
Sbjct: 1   MLRAMSSAVSGLQNNQTAMDVIGNNIANVNTIGFKASTVTFSQMLSQTLSGASAPQNGLG 60

Query: 61  SGKEYL------------SKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                                  S  +TG   D A++G+ +F + +      TRDG F V
Sbjct: 61  GINPMQIGLGTQIAAISTPFTSSSTENTGVNTDLAIQGNGFFIVNNGSQNFYTRDGSFNV 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
             +G+LV+++G       A     +     + ++      S   K    + +     +  
Sbjct: 121 DANGNLVNSAGLKVQGWQADSSGVVNPSGPVSDLKIPIGQSMPAKQSNNITMTGNLDASQ 180

Query: 169 FVRRENSGISPNIPPTPLEDLSGV 192
           +    +S     +  +     S  
Sbjct: 181 YANTSSSTTPYAVTSSGAIYDSLG 204



 Score = 68.7 bits (166), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 19/144 (13%), Positives = 48/144 (33%), Gaps = 10/144 (6%)

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQK-----GKVIATMGL 160
           +  T + S ++  G    L+ AS         + +++ + G I+          I  + L
Sbjct: 411 WTPTINFSGMTQYGGSSSLNFASQDGYSSGSLQSYSIDQSGVITGTYSNGLTNAIGQIAL 470

Query: 161 YSVDMSQGFVRRENSGISP-----NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIH 215
            +     G     ++  S                   T+    LE SN +   +   +I 
Sbjct: 471 ANFPNPSGLTSNGSNIYSTSSNSGTAQIGAAGSGGIGTIIPSALEMSNVDLSQQFTNLIT 530

Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239
             + + +   +I  +++ + + + 
Sbjct: 531 TERGYEANARVITTSDQMLQDLLS 554


>gi|326791535|ref|YP_004309356.1| flagellar hook-basal body protein [Clostridium lentocellum DSM
           5427]
 gi|326542299|gb|ADZ84158.1| flagellar hook-basal body protein [Clostridium lentocellum DSM
           5427]
          Length = 432

 Score = 97.2 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 26/142 (18%), Positives = 53/142 (37%), Gaps = 14/142 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S    ++     + R+  + +N++N +T+G+++ +V F++V                
Sbjct: 1   MMRSMFSAVSGLRVHQTRMDVIGNNIANVNTIGYKSQRVTFNDVFSQTLSSASAASDETG 60

Query: 49  --KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106
               +  Q    V      +    G+   T    D  + G+ +  +    G   TR G  
Sbjct: 61  RGGRNPMQVGLGVNVSSIDMLMTQGAAQRTDNPFDLMINGEGFIVVGDTNGTYFTRAGAL 120

Query: 107 KVTDDGSLVSASGKYPVLDMAS 128
           +   DG+L+ A+G       A 
Sbjct: 121 RADVDGNLIIANGMKVKGWTAQ 142



 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 17/124 (13%), Positives = 43/124 (34%), Gaps = 1/124 (0%)

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           ++     ++  +    I  +     V      +   +++A + +   D  +G  +  ++ 
Sbjct: 306 STIDPKTINGNAAGKMIGYEIGGDGVITASYDNGDMRILAQVVVAKFDNPEGLEKVGDNL 365

Query: 177 I-SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
                         +  T   G LE SN +   E   MI   + F + + +I  +++ + 
Sbjct: 366 YKVTPNSGEFDGIGTVGTFNTGVLEMSNVDLSSEFTDMIVTQRGFQANSRIISVSDEMLQ 425

Query: 236 EAIR 239
           E   
Sbjct: 426 ELTN 429


>gi|317180632|dbj|BAJ58418.1| flagellar hook protein FlgE [Helicobacter pylori F32]
          Length = 718

 Score = 97.2 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 66/197 (33%), Gaps = 15/197 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G+    A +  L   ++N++N +T GF+  +  F +++  +            
Sbjct: 1   MLRSLWSGVNGMQAHQIALDIESNNIANVNTTGFKYSRASFVDMLSQVKLIATAPYKNGL 60

Query: 49  -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGR 105
              +       V           G+  +T  + D A++GD +F +   RGI    TRDG 
Sbjct: 61  AGQNDFSVGLGVGVDATTKIFSQGNIQNTDVKTDLAIQGDGFFIISPDRGITRNFTRDGE 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           F     GSLV+  G      + +      +  +   +        +   I    +     
Sbjct: 121 FLFDSQGSLVTTGGLVVQGWVRNGSDTGNKGSDTDALKVDNTGPLENIRIDPGMVMPARA 180

Query: 166 SQGFVRRENSGISPNIP 182
           S     R N     +  
Sbjct: 181 SNRISMRANLNAGRHAD 197



 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 14/128 (10%), Positives = 40/128 (31%), Gaps = 5/128 (3%)

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           +       +       +  + +   V      + +   +A + L +     G      + 
Sbjct: 588 SETYAIEQNGYQAGDLMDVRFDSDGVLLGAFSNGRTLALAQVALANFANDAGLQALGGNV 647

Query: 177 ISPNIPPTPLEDLSGVTVKRGF-----LEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
            S           +  T +RG      LE SN +    +  +I + + F + +  +  ++
Sbjct: 648 FSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQRGFQANSKAVTTSD 707

Query: 232 KSMLEAIR 239
           + +   + 
Sbjct: 708 QILNTLLN 715


>gi|108563278|ref|YP_627594.1| flagellar hook protein FlgE [Helicobacter pylori HPAG1]
 gi|217033066|ref|ZP_03438533.1| hypothetical protein HPB128_148g6 [Helicobacter pylori B128]
 gi|254779163|ref|YP_003057268.1| flagellar hook protein FlgE [Helicobacter pylori B38]
 gi|298736574|ref|YP_003729100.1| flagellar hook protein FlgE [Helicobacter pylori B8]
 gi|107837051|gb|ABF84920.1| flagellar hook protein [Helicobacter pylori HPAG1]
 gi|216945210|gb|EEC23895.1| hypothetical protein HPB128_148g6 [Helicobacter pylori B128]
 gi|254001074|emb|CAX29021.1| Flagellar hook protein FlgE [Helicobacter pylori B38]
 gi|298355764|emb|CBI66636.1| flagellar hook protein FlgE [Helicobacter pylori B8]
 gi|317009123|gb|ADU79703.1| flagellar hook protein FlgE [Helicobacter pylori India7]
 gi|317012675|gb|ADU83283.1| flagellar hook protein FlgE [Helicobacter pylori Lithuania75]
          Length = 718

 Score = 97.2 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 66/197 (33%), Gaps = 15/197 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G+    A +  L   ++N++N +T GF+  +  F +++  +            
Sbjct: 1   MLRSLWSGVNGMQAHQIALDIESNNIANVNTTGFKYSRASFVDMLSQVKLIATAPYKNGL 60

Query: 49  -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGR 105
              +       V           G+  +T  + D A++GD +F +   RGI    TRDG 
Sbjct: 61  AGQNDFSVGLGVGVDATTKIFSQGNIQNTDVKTDLAIQGDGFFIISPDRGITRNFTRDGE 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           F     GSLV+  G      + +      +  +   +        +   I    +     
Sbjct: 121 FLFDSQGSLVTTGGLVVQGWVRNGSDTGNKGSDTDALKVDNTGPLENIRIDPGMVMPARA 180

Query: 166 SQGFVRRENSGISPNIP 182
           S     R N     +  
Sbjct: 181 SNRISMRANLNAGRHAD 197



 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 14/128 (10%), Positives = 40/128 (31%), Gaps = 5/128 (3%)

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           +       +       +  + +   V      + +   +A + L +     G      + 
Sbjct: 588 SETYAIEQNGYQAGDLMDVRFDSDGVLLGAFSNGRTLALAQVALANFANDAGLQALGGNV 647

Query: 177 ISPNIPPTPLEDLSGVTVKRGF-----LEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
            S           +  T +RG      LE SN +    +  +I + + F + +  +  ++
Sbjct: 648 FSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQRGFQANSKAVTTSD 707

Query: 232 KSMLEAIR 239
           + +   + 
Sbjct: 708 QILNTLLN 715


>gi|317014278|gb|ADU81714.1| flagellar hook protein FlgE [Helicobacter pylori Gambia94/24]
          Length = 718

 Score = 97.2 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 66/197 (33%), Gaps = 15/197 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G+    A +  L   ++N++N +T GF+  +  F +++  +            
Sbjct: 1   MLRSLWSGVNGMQAHQIALDIESNNIANVNTTGFKYSRASFVDMLSQVKLIATAPYKNGL 60

Query: 49  -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGR 105
              +       V           G+  +T  + D A++GD +F +   RGI    TRDG 
Sbjct: 61  AGQNDFSVGLGVGVDATTKIFSQGNIQNTDVKTDLAIQGDGFFIISPDRGITRNFTRDGE 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           F     GSLV+  G      + +      +  +   +        +   I    +     
Sbjct: 121 FLFDSQGSLVTTGGLVVQGWVRNGSDTGNKGSDTDALKVDNTGPLENIRIDPGMVMPARA 180

Query: 166 SQGFVRRENSGISPNIP 182
           S     R N     +  
Sbjct: 181 SNRISMRANLNAGRHAD 197



 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 14/128 (10%), Positives = 40/128 (31%), Gaps = 5/128 (3%)

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           +       +       +  + +   V      + +   +A + L +     G      + 
Sbjct: 588 SETYAIEQNGYQAGDLMDVRFDSDGVLLGAFSNGRTLALAQVALANFANDAGLQALGGNV 647

Query: 177 ISPNIPPTPLEDLSGVTVKRGF-----LEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
            S           +  T +RG      LE SN +    +  +I + + F + +  +  ++
Sbjct: 648 FSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQRGFQANSKAVTTSD 707

Query: 232 KSMLEAIR 239
           + +   + 
Sbjct: 708 QILNTLLN 715


>gi|312126828|ref|YP_003991702.1| fagellar hook-basal body protein [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311776847|gb|ADQ06333.1| fagellar hook-basal body protein [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 486

 Score = 97.2 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 65/155 (41%), Gaps = 15/155 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S    ++A  A + R+  + DN++N +TVGF++ +V F+ V  ++            
Sbjct: 1   MMRSMFSSISALRAHQTRMDVIGDNIANVNTVGFKSSRVTFASVFASVLKSASAPDTASG 60

Query: 49  --KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGR 105
              ++  Q    V+     ++   GS   T    D A+EGD +F +    R    TR G 
Sbjct: 61  RGGSNPMQIGLGVSVASVDMNMTRGSLQRTDNPTDLAIEGDGFFVVGGDGRAPRFTRAGN 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF 140
           F +   G+LV+A+G   +  M           +  
Sbjct: 121 FSLDKMGNLVTATGLNVLGWMYDPVNNQIDTTKSP 155



 Score = 86.8 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 14/93 (15%), Positives = 36/93 (38%), Gaps = 5/93 (5%)

Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANS 206
            ++I  + + +     G  R  ++     +     E  +       T+ +G LE SN + 
Sbjct: 391 NQLIGQIAIATFANPAGLQRIGDNLYINTVNSGDPEIGTPGSGSRGTISQGTLEMSNVDL 450

Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             E   MI   + + +   +I  +++ + + + 
Sbjct: 451 AKEFTDMIVTQRGYQANARVITASDELLQDLVN 483


>gi|261839317|gb|ACX99082.1| flagellar hook protein FlgE [Helicobacter pylori 52]
 gi|317178772|dbj|BAJ56560.1| flagellar hook protein FlgE [Helicobacter pylori F30]
          Length = 718

 Score = 97.2 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 66/197 (33%), Gaps = 15/197 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G+    A +  L   ++N++N +T GF+  +  F +++  +            
Sbjct: 1   MLRSLWSGVNGMQAHQIALDIESNNIANVNTTGFKYSRASFVDMLSQVKLIATAPYKNGL 60

Query: 49  -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGR 105
              +       V           G+  +T  + D A++GD +F +   RGI    TRDG 
Sbjct: 61  AGQNDFSVGLGVGVDATTKIFSQGNIQNTDVKTDLAIQGDGFFIISPDRGITRNFTRDGE 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           F     GSLV+  G      + +      +  +   +        +   I    +     
Sbjct: 121 FLFDSQGSLVTTGGLVVQGWVRNGSDTGNKGSDTDALKVDNTGPLENIRIDPGMVMPARA 180

Query: 166 SQGFVRRENSGISPNIP 182
           S     R N     +  
Sbjct: 181 SNRISMRANLNAGRHAD 197



 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 14/128 (10%), Positives = 40/128 (31%), Gaps = 5/128 (3%)

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           +       +       +  + +   V      + +   +A + L +     G      + 
Sbjct: 588 SETYAIEQNGYQAGDLMDVRFDSDGVLLGAFSNGRTLALAQVALANFANDAGLQALGGNV 647

Query: 177 ISPNIPPTPLEDLSGVTVKRGF-----LEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
            S           +  T +RG      LE SN +    +  +I + + F + +  +  ++
Sbjct: 648 FSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQRGFQANSKAVTTSD 707

Query: 232 KSMLEAIR 239
           + +   + 
Sbjct: 708 QILNTLLN 715


>gi|210135063|ref|YP_002301502.1| flagellar hook protein FlgE [Helicobacter pylori P12]
 gi|210133031|gb|ACJ08022.1| flagellar hook protein [Helicobacter pylori P12]
          Length = 718

 Score = 97.2 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 66/197 (33%), Gaps = 15/197 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G+    A +  L   ++N++N +T GF+  +  F +++  +            
Sbjct: 1   MLRSLWSGVNGMQAHQIALDIESNNIANVNTTGFKYSRASFVDMLSQVKLIATAPYKNGL 60

Query: 49  -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGR 105
              +       V           G+  +T  + D A++GD +F +   RGI    TRDG 
Sbjct: 61  AGQNDFSVGLGVGVDATTKIFSQGNIQNTDVKTDLAIQGDGFFIISPDRGITRNFTRDGE 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           F     GSLV+  G      + +      +  +   +        +   I    +     
Sbjct: 121 FLFDSQGSLVTTGGLVVQGWVRNGSDTGNKGSDTDALKVDNTGPLENIRIDPGMVMPARA 180

Query: 166 SQGFVRRENSGISPNIP 182
           S     R N     +  
Sbjct: 181 SNRISMRANLNAGRHAD 197



 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 14/128 (10%), Positives = 40/128 (31%), Gaps = 5/128 (3%)

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           +       +       +  + +   V      + +   +A + L +     G      + 
Sbjct: 588 SETYAIEQNGYQAGDLMDVRFDSDGVLLGAFSNGRTLALAQVALANFANDAGLQALGGNV 647

Query: 177 ISPNIPPTPLEDLSGVTVKRGF-----LEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
            S           +  T +RG      LE SN +    +  +I + + F + +  +  ++
Sbjct: 648 FSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQRGFQANSKAVTTSD 707

Query: 232 KSMLEAIR 239
           + +   + 
Sbjct: 708 QILNTLLN 715


>gi|15611871|ref|NP_223522.1| flagellar hook protein FlgE [Helicobacter pylori J99]
 gi|11386868|sp|Q9ZKY0|FLGE_HELPJ RecName: Full=Flagellar hook protein flgE
 gi|4155354|gb|AAD06366.1| FLAGELLAR HOOK PROTEIN [Helicobacter pylori J99]
 gi|307637557|gb|ADN80007.1| Flagellar hook protein [Helicobacter pylori 908]
 gi|325996148|gb|ADZ51553.1| Flagellar hook protein [Helicobacter pylori 2018]
 gi|325997744|gb|ADZ49952.1| Flagellar hook protein [Helicobacter pylori 2017]
          Length = 718

 Score = 97.2 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 66/197 (33%), Gaps = 15/197 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G+    A +  L   ++N++N +T GF+  +  F +++  +            
Sbjct: 1   MLRSLWSGVNGMQAHQIALDIESNNIANVNTTGFKYSRASFVDMLSQVKLIATAPYKNGL 60

Query: 49  -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGR 105
              +       V           G+  +T  + D A++GD +F +   RGI    TRDG 
Sbjct: 61  AGQNDFSVGLGVGVDATTKIFSQGNIQNTDVKTDLAIQGDGFFIISPDRGITRNFTRDGE 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           F     GSLV+  G      + +      +  +   +        +   I    +     
Sbjct: 121 FLFDSQGSLVTTGGLVVQGWVRNGSDTGNKGSDTDALKVDNTGPLENIRIDPGMVMPARA 180

Query: 166 SQGFVRRENSGISPNIP 182
           S     R N     +  
Sbjct: 181 SNRISMRANLNAGRHAD 197



 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 14/128 (10%), Positives = 40/128 (31%), Gaps = 5/128 (3%)

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           +       +       +  + +   V      + +   +A + L +     G      + 
Sbjct: 588 SETYAIEQNGYQAGDLMDVRFDSDGVLLGAFSNGRTLALAQVALANFANDAGLQALGGNV 647

Query: 177 ISPNIPPTPLEDLSGVTVKRGF-----LEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
            S           +  T +RG      LE SN +    +  +I + + F + +  +  ++
Sbjct: 648 FSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQRGFQANSKAVTTSD 707

Query: 232 KSMLEAIR 239
           + +   + 
Sbjct: 708 QILNTLLN 715


>gi|308063336|gb|ADO05223.1| flagellar hook protein FlgE [Helicobacter pylori Sat464]
          Length = 718

 Score = 97.2 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 66/197 (33%), Gaps = 15/197 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G+    A +  L   ++N++N +T GF+  +  F +++  +            
Sbjct: 1   MLRSLWSGVNGMQAHQIALDIESNNIANVNTTGFKYSRASFVDMLSQVKLIATAPYKNGL 60

Query: 49  -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGR 105
              +       V           G+  +T  + D A++GD +F +   RGI    TRDG 
Sbjct: 61  AGQNDFSVGLGVGVDATTKIFSQGNIQNTDVKTDLAIQGDGFFIISPDRGITRNFTRDGE 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           F     GSLV+  G      + +      +  +   +        +   I    +     
Sbjct: 121 FLFDSQGSLVTTGGLVVQGWVRNGSDTGNKGSDTDALKVDNTGPLENIRIDPGMVMPARA 180

Query: 166 SQGFVRRENSGISPNIP 182
           S     R N     +  
Sbjct: 181 SNRISMRANLNAGRHAD 197



 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 14/128 (10%), Positives = 40/128 (31%), Gaps = 5/128 (3%)

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           +       +       +  + +   V      + +   +A + L +     G      + 
Sbjct: 588 SETYAIEQNGYQAGDLMDVRFDSDGVLLGAFSNGRTLALAQVALANFANDAGLQALGGNV 647

Query: 177 ISPNIPPTPLEDLSGVTVKRGF-----LEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
            S           +  T +RG      LE SN +    +  +I + + F + +  +  ++
Sbjct: 648 FSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQRGFQANSKAVTTSD 707

Query: 232 KSMLEAIR 239
           + +   + 
Sbjct: 708 QILNTLLN 715


>gi|237755390|ref|ZP_04584017.1| flagellar basal body and hook protein FlgE [Sulfurihydrogenibium
           yellowstonense SS-5]
 gi|237692431|gb|EEP61412.1| flagellar basal body and hook protein FlgE [Sulfurihydrogenibium
           yellowstonense SS-5]
          Length = 413

 Score = 97.2 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/162 (22%), Positives = 67/162 (41%), Gaps = 8/162 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV-------VGAIKNDID 53
           M  SF   +      +Q L+ ++DN++N +T+GF++ +V F ++                
Sbjct: 1   MLQSFYTAITGLNGNQQWLNVISDNIANVNTIGFKSERVTFEDLIAHSLTTFANNTPKNT 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDG 112
           +                GSF++T +  D AL+G+ +F ++  +G    TR G+F++  DG
Sbjct: 61  EIGGGSFIALTTKDFSQGSFMNTNSPTDLALDGEGFFMVKDNQGTVYYTRAGQFRLNADG 120

Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV 154
            LV+  G             I    +  NV      +   K+
Sbjct: 121 DLVNVDGMKLQGWTLDDKGNIIGALDKINVPYAINPTITTKI 162



 Score = 79.9 bits (195), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 63/197 (31%), Gaps = 9/197 (4%)

Query: 52  IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGR------ 105
            ++  +              +     + L+F   G+          + LT          
Sbjct: 214 TNESSTGSTWKVYVYMDNDLTTQVGSSTLNFDTNGNLTSGSPFTLSLTLTNGATSPQSIT 273

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
             V+    + S    Y   D  +    I        + +    +   K IA + + +   
Sbjct: 274 VDVSKIKQVASDFIFYANQDGFAKGDLIGVAVAEDGIIKGMYSNGNVKNIARLAVATFKD 333

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGV---TVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222
            +  VR+ N+   PN          G     V+ GFLE SN +   E   +I   + + +
Sbjct: 334 KEMLVRKGNNLYLPNTQTFTPIITPGGILSKVRSGFLELSNVDISREFINLITAQRAYQA 393

Query: 223 ITTLIDENEKSMLEAIR 239
              +I  +++ + EA+ 
Sbjct: 394 NARVITTDDQILQEAMN 410


>gi|308184654|ref|YP_003928787.1| flagellar hook protein FlgE [Helicobacter pylori SJM180]
 gi|308060574|gb|ADO02470.1| flagellar hook protein FlgE [Helicobacter pylori SJM180]
          Length = 718

 Score = 97.2 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 66/197 (33%), Gaps = 15/197 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G+    A +  L   ++N++N +T GF+  +  F +++  +            
Sbjct: 1   MLRSLWSGVNGMQAHQIALDIESNNIANVNTTGFKYSRASFVDMLSQVKLIATAPYKNGL 60

Query: 49  -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGR 105
              +       V           G+  +T  + D A++GD +F +   RGI    TRDG 
Sbjct: 61  AGQNDFSVGLGVGVDATTKIFSQGNIQNTDVKTDLAIQGDGFFIISPDRGITRNFTRDGE 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           F     GSLV+  G      + +      +  +   +        +   I    +     
Sbjct: 121 FLFDSQGSLVTTGGLVVQGWVRNGSDTGNKGSDTDALKVDNTGPLENIRIDPGMVMPARA 180

Query: 166 SQGFVRRENSGISPNIP 182
           S     R N     +  
Sbjct: 181 SNRISMRANLNAGRHAD 197



 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 14/128 (10%), Positives = 40/128 (31%), Gaps = 5/128 (3%)

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           +       +       +  + +   V      + +   +A + L +     G      + 
Sbjct: 588 SETYAIEQNGYQAGDLMDVRFDSDGVLLGAFSNGRTLALAQVALANFANDAGLQALGGNV 647

Query: 177 ISPNIPPTPLEDLSGVTVKRGF-----LEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
            S           +  T +RG      LE SN +    +  +I + + F + +  +  ++
Sbjct: 648 FSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQRGFQANSKAVTTSD 707

Query: 232 KSMLEAIR 239
           + +   + 
Sbjct: 708 QILNTLLN 715


>gi|32490791|ref|NP_871045.1| hypothetical protein WGLp042 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|25165997|dbj|BAC24188.1| flgF [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 246

 Score = 97.2 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 88/246 (35%), Gaps = 9/246 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A ++   R S  A+N+SN  T GF+      S     ++ D      F  
Sbjct: 1   MDKAIYTAMNAAISYADRHSINANNLSNISTSGFKFHIP--SSKYITVRGDSFITRVFPT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +     +K  G+   +G  LD A+ G+ W A++        T++G  K+ ++G  ++   
Sbjct: 59  ATTSTHNKNPGNVNYSGNNLDVAILGEGWLAIQLEDGSEGYTKNGHIKINEEG-KLTIKN 117

Query: 120 KYPVLDMASVPIQIPQKD----EIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
              +          P  D        +   G       + +   L         +    +
Sbjct: 118 FPVIGSENGALEVTPGSDLTISSDGTISAIGPGESSKSITSVGKLKLAKSDLNDLELNEN 177

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
           GI  +     L+    + +     E+SN +++  + ++I  ++ F     LI    ++  
Sbjct: 178 GIFISKNNKILQSDESIRLIPNAFEESNVSAVDSIIKIIDDSRNFEMQMKLISNISEN-S 236

Query: 236 EAIRNI 241
           +    I
Sbjct: 237 KISNQI 242


>gi|332673326|gb|AEE70143.1| flagellar hook protein FlgE [Helicobacter pylori 83]
          Length = 718

 Score = 97.2 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 66/197 (33%), Gaps = 15/197 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G+    A +  L   ++N++N +T GF+  +  F +++  +            
Sbjct: 1   MLRSLWSGVNGMQAHQIALDIESNNIANVNTTGFKYSRASFVDMLSQVKLIATAPYKNGL 60

Query: 49  -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGR 105
              +       V           G+  +T  + D A++GD +F +   RGI    TRDG 
Sbjct: 61  AGQNDFSVGLGVGVDATTKIFSQGNIQNTDVKTDLAIQGDGFFIISPDRGITRNFTRDGE 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           F     GSLV+  G      + +      +  +   +        +   I    +     
Sbjct: 121 FLFDSQGSLVTTGGLVVQGWVRNGSDTGNKGSDTDALKVDNTGPLENIRIDPGMVMPARA 180

Query: 166 SQGFVRRENSGISPNIP 182
           S     R N     +  
Sbjct: 181 SNRISMRANLNAGRHAD 197



 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 14/128 (10%), Positives = 40/128 (31%), Gaps = 5/128 (3%)

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           +       +       +  + +   V      + +   +A + L +     G      + 
Sbjct: 588 SETYAIEQNGYQAGDLMDVRFDSDGVLLGAFSNGRTLALAQVALANFANDAGLQALGGNV 647

Query: 177 ISPNIPPTPLEDLSGVTVKRGF-----LEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
            S           +  T +RG      LE SN +    +  +I + + F + +  +  ++
Sbjct: 648 FSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQRGFQANSKAVTTSD 707

Query: 232 KSMLEAIR 239
           + +   + 
Sbjct: 708 QILNTLLN 715


>gi|261837904|gb|ACX97670.1| flagellar hook protein [Helicobacter pylori 51]
          Length = 718

 Score = 97.2 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 66/197 (33%), Gaps = 15/197 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G+    A +  L   ++N++N +T GF+  +  F +++  +            
Sbjct: 1   MLRSLWSGVNGMQAHQIALDIESNNIANVNTTGFKYSRASFVDMLSQVKLIATAPYKNGL 60

Query: 49  -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGR 105
              +       V           G+  +T  + D A++GD +F +   RGI    TRDG 
Sbjct: 61  AGQNDFSVGLGVGVDATTKIFSQGNIQNTDVKTDLAIQGDGFFIISPDRGITHNFTRDGE 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           F     GSLV+  G      + +      +  +   +        +   I    +     
Sbjct: 121 FLFDSQGSLVTTGGLVVQGWVRNGSDTGNKGSDTDALKVDNTGPLENIRIDPGMVMPARA 180

Query: 166 SQGFVRRENSGISPNIP 182
           S     R N     +  
Sbjct: 181 SNRISMRANLNAGRHAD 197



 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 14/128 (10%), Positives = 40/128 (31%), Gaps = 5/128 (3%)

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           +       +       +  + +   V      + +   +A + L +     G      + 
Sbjct: 588 SETYAIEQNGYQAGDLMDVRFDSDGVLLGAFSNGRTLALAQVALANFANDAGLQALGGNV 647

Query: 177 ISPNIPPTPLEDLSGVTVKRGF-----LEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
            S           +  T +RG      LE SN +    +  +I + + F + +  +  ++
Sbjct: 648 FSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQRGFQANSKAVTTSD 707

Query: 232 KSMLEAIR 239
           + +   + 
Sbjct: 708 QILNTLLN 715


>gi|312621577|ref|YP_004023190.1| fagellar hook-basal body protein [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312202044|gb|ADQ45371.1| fagellar hook-basal body protein [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 488

 Score = 97.2 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 65/155 (41%), Gaps = 15/155 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S    ++A  A + R+  + DN++N +TVGF++ +V F+ V  ++            
Sbjct: 1   MMRSMFSSISALRAHQTRMDVIGDNIANVNTVGFKSSRVTFASVFASVLKSASAPDTASG 60

Query: 49  --KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGR 105
              ++  Q    V+     ++   GS   T    D A+EGD +F +    +    TR G 
Sbjct: 61  RGGSNPMQIGLGVSVASVDMNMTRGSLQRTDNPTDLAIEGDGFFVVGGDGKAPRFTRAGN 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF 140
           F +   G+LV+A+G   +  M           +  
Sbjct: 121 FSLDKMGNLVTATGLNVLGWMYDPVNNQIDTTKSP 155



 Score = 87.6 bits (215), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 21/210 (10%), Positives = 55/210 (26%), Gaps = 6/210 (2%)

Query: 36  TIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP 95
              + F +    + ++    +  +A              +   +                
Sbjct: 276 RGTITFGQAGKVLDDENTPDVEGIAITGGRFINTQDGTFTINFKNSVVNPVTLKVNSSQF 335

Query: 96  RGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQK-GKV 154
                T    F           S              +   +   +    G  S    ++
Sbjct: 336 DVNDATNIAFFLKNITQFGNMESSIRVAQMTGYSAGSLQGFNVDASGKITGVYSNGLNQL 395

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYE 209
           I  + + +     G  R  ++     +     E  +       T+ +G LE SN +   E
Sbjct: 396 IGQIAIATFANPAGLQRIGDNLYINTVNSGDPEIGTPGSGSRGTISQGTLEMSNVDLAKE 455

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              MI   + + +   +I  +++ + + + 
Sbjct: 456 FTDMIVTQRGYQANARVITASDELLQDLVN 485


>gi|317177302|dbj|BAJ55091.1| flagellar hook protein FlgE [Helicobacter pylori F16]
          Length = 718

 Score = 97.2 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 66/197 (33%), Gaps = 15/197 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G+    A +  L   ++N++N +T GF+  +  F +++  +            
Sbjct: 1   MLRSLWSGVNGMQAHQIALDIESNNIANVNTTGFKYSRASFVDMLSQVKLIATAPYKNGL 60

Query: 49  -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGR 105
              +       V           G+  +T  + D A++GD +F +   RGI    TRDG 
Sbjct: 61  AGQNDFSVGLGVGVDATTKIFSQGNIQNTDVKTDLAIQGDGFFIISPDRGITRNFTRDGE 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           F     GSLV+  G      + +      +  +   +        +   I    +     
Sbjct: 121 FLFDSQGSLVTTGGLVVQGWVRNGSDTGNKGSDTDALKVDNTGPLENIRIDPGMVMPARA 180

Query: 166 SQGFVRRENSGISPNIP 182
           S     R N     +  
Sbjct: 181 SNRISMRANLNAGRHAD 197



 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 14/128 (10%), Positives = 40/128 (31%), Gaps = 5/128 (3%)

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           +       +       +  + +   V      + +   +A + L +     G      + 
Sbjct: 588 SETYAIEQNGYQAGDLMDVRFDSDGVLLGAFSNGRTLALAQVALANFANDAGLQALGGNV 647

Query: 177 ISPNIPPTPLEDLSGVTVKRGF-----LEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
            S           +  T +RG      LE SN +    +  +I + + F + +  +  ++
Sbjct: 648 FSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQRGFQANSKAVTTSD 707

Query: 232 KSMLEAIR 239
           + +   + 
Sbjct: 708 QILNTLLN 715


>gi|297380070|gb|ADI34957.1| flagellar hook protein FlgE [Helicobacter pylori v225d]
 gi|315586465|gb|ADU40846.1| flagellar hook protein FlgE [Helicobacter pylori 35A]
 gi|317182178|dbj|BAJ59962.1| flagellar hook protein FlgE [Helicobacter pylori F57]
          Length = 718

 Score = 97.2 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 66/197 (33%), Gaps = 15/197 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G+    A +  L   ++N++N +T GF+  +  F +++  +            
Sbjct: 1   MLRSLWSGVNGMQAHQIALDIESNNIANVNTTGFKYSRASFVDMLSQVKLIATAPYKNGL 60

Query: 49  -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGR 105
              +       V           G+  +T  + D A++GD +F +   RGI    TRDG 
Sbjct: 61  AGQNDFSVGLGVGVDATTKIFSQGNIQNTDVKTDLAIQGDGFFIISPDRGITRNFTRDGE 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           F     GSLV+  G      + +      +  +   +        +   I    +     
Sbjct: 121 FLFDSQGSLVTTGGLVVQGWVRNGSDTGNKGSDTDALKVDNTGPLENIRIDPGMVMPARA 180

Query: 166 SQGFVRRENSGISPNIP 182
           S     R N     +  
Sbjct: 181 SNRISMRANLNAGRHAD 197



 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 14/128 (10%), Positives = 40/128 (31%), Gaps = 5/128 (3%)

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           +       +       +  + +   V      + +   +A + L +     G      + 
Sbjct: 588 SETYAIEQNGYQAGDLMDVRFDSDGVLLGAFSNGRTLALAQVALANFANDAGLQALGGNV 647

Query: 177 ISPNIPPTPLEDLSGVTVKRGF-----LEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
            S           +  T +RG      LE SN +    +  +I + + F + +  +  ++
Sbjct: 648 FSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQRGFQANSKAVTTSD 707

Query: 232 KSMLEAIR 239
           + +   + 
Sbjct: 708 QILNTLLN 715


>gi|188527285|ref|YP_001909972.1| flagellar hook protein FlgE [Helicobacter pylori Shi470]
 gi|188143525|gb|ACD47942.1| flagellar hook protein FlgE [Helicobacter pylori Shi470]
 gi|308062194|gb|ADO04082.1| flagellar hook protein FlgE [Helicobacter pylori Cuz20]
          Length = 718

 Score = 97.2 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 66/197 (33%), Gaps = 15/197 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G+    A +  L   ++N++N +T GF+  +  F +++  +            
Sbjct: 1   MLRSLWSGVNGMQAHQIALDIESNNIANVNTTGFKYSRASFVDMLSQVKLIATAPYKNGL 60

Query: 49  -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGR 105
              +       V           G+  +T  + D A++GD +F +   RGI    TRDG 
Sbjct: 61  AGQNDFSVGLGVGVDATTKIFSQGNIQNTDVKTDLAIQGDGFFIISPDRGITRNFTRDGE 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           F     GSLV+  G      + +      +  +   +        +   I    +     
Sbjct: 121 FLFDSQGSLVTTGGLVVQGWVRNGSDTGNKGSDTDALKVDNTGPLENIRIDPGMVMPARA 180

Query: 166 SQGFVRRENSGISPNIP 182
           S     R N     +  
Sbjct: 181 SNRISMRANLNAGRHAD 197



 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 14/128 (10%), Positives = 40/128 (31%), Gaps = 5/128 (3%)

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           +       +       +  + +   V      + +   +A + L +     G      + 
Sbjct: 588 SETYAIEQNGYQAGDLMDVRFDSDGVLLGAFSNGRTLALAQVALANFANDAGLQALGGNV 647

Query: 177 ISPNIPPTPLEDLSGVTVKRGF-----LEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
            S           +  T +RG      LE SN +    +  +I + + F + +  +  ++
Sbjct: 648 FSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQRGFQANSKAVTTSD 707

Query: 232 KSMLEAIR 239
           + +   + 
Sbjct: 708 QILNTLLN 715


>gi|317011083|gb|ADU84830.1| flagellar hook protein FlgE [Helicobacter pylori SouthAfrica7]
          Length = 718

 Score = 97.2 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 66/197 (33%), Gaps = 15/197 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G+    A +  L   ++N++N +T GF+  +  F +++  +            
Sbjct: 1   MLRSLWSGVNGMQAHQIALDIESNNIANVNTTGFKYSRASFVDMLSQVKLIATAPYKNGL 60

Query: 49  -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGR 105
              +       V           G+  +T  + D A++GD +F +   RGI    TRDG 
Sbjct: 61  AGQNDFSVGLGVGVDATTKIFSQGNIQNTDVKTDLAIQGDGFFIISPDRGITRNFTRDGE 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           F     GSLV+  G      + +      +  +   +        +   I    +     
Sbjct: 121 FLFDSQGSLVTTGGLVVQGWVRNGSDTGNKGSDTDALKVDNTGPLENIRIDPGMVMPARA 180

Query: 166 SQGFVRRENSGISPNIP 182
           S     R N     +  
Sbjct: 181 SNRISMRANLNAGRHAD 197



 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 14/128 (10%), Positives = 40/128 (31%), Gaps = 5/128 (3%)

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           +       +       +  + +   V      + +   +A + L +     G      + 
Sbjct: 588 SETYAIEQNGYQAGDLMDVRFDSDGVLLGAFSNGRTLALAQVALANFANDAGLQALGGNV 647

Query: 177 ISPNIPPTPLEDLSGVTVKRGF-----LEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
            S           +  T +RG      LE SN +    +  +I + + F + +  +  ++
Sbjct: 648 FSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQRGFQANSKAVTTSD 707

Query: 232 KSMLEAIR 239
           + +   + 
Sbjct: 708 QILNTLLN 715


>gi|308183024|ref|YP_003927151.1| flagellar hook protein FlgE [Helicobacter pylori PeCan4]
 gi|308065209|gb|ADO07101.1| flagellar hook protein FlgE [Helicobacter pylori PeCan4]
          Length = 718

 Score = 97.2 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 66/197 (33%), Gaps = 15/197 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G+    A +  L   ++N++N +T GF+  +  F +++  +            
Sbjct: 1   MLRSLWSGVNGMQAHQIALDIESNNIANVNTTGFKYSRASFVDMLSQVKLIATAPYKNGL 60

Query: 49  -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGR 105
              +       V           G+  +T  + D A++GD +F +   RGI    TRDG 
Sbjct: 61  AGQNDFSVGLGVGVDATTKIFSQGNIQNTDVKTDLAIQGDGFFIISPDRGITRNFTRDGE 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           F     GSLV+  G      + +      +  +   +        +   I    +     
Sbjct: 121 FLFDSQGSLVTTGGLVVQGWVRNGSDTGNKGSDTDALKVDNTGPLENIRIDPGMVMPARA 180

Query: 166 SQGFVRRENSGISPNIP 182
           S     R N     +  
Sbjct: 181 SNRISMRANLNAGRHAD 197



 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 14/128 (10%), Positives = 40/128 (31%), Gaps = 5/128 (3%)

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           +       +       +  + +   V      + +   +A + L +     G      + 
Sbjct: 588 SETYAIEQNGYQAGDLMDVRFDSDGVLLGAFSNGRTLALAQVALANFANDAGLQALGGNV 647

Query: 177 ISPNIPPTPLEDLSGVTVKRGF-----LEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
            S           +  T +RG      LE SN +    +  +I + + F + +  +  ++
Sbjct: 648 FSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQRGFQANSKAVTTSD 707

Query: 232 KSMLEAIR 239
           + +   + 
Sbjct: 708 QILNTLLN 715


>gi|302670727|ref|YP_003830687.1| flagellar hook protein FlgE1 [Butyrivibrio proteoclasticus B316]
 gi|302395200|gb|ADL34105.1| flagellar hook protein FlgE1 [Butyrivibrio proteoclasticus B316]
          Length = 1049

 Score = 97.2 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 63/166 (37%), Gaps = 13/166 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG---AIKNDIDQKIS 57
           M  S   G+A     + ++  + +N++N +T  F++  + FS+++       +   +   
Sbjct: 1   MMRSLYSGVAGLKTHQTKMDVIGNNIANVNTTSFKSQSITFSDLMYQTTQTASGATETKG 60

Query: 58  FVASGK----------EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107
            V + +                 G+  +T    D  + G+++F + +    + TRDG F 
Sbjct: 61  GVNARQIGLGAKSGAINTAITSQGATQTTNNPFDIMITGESFFIVNNGNENLYTRDGSFY 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK 153
           V   G+L   S  Y V    +V  +   +  I      G      +
Sbjct: 121 VDGAGNLAMQSNGYLVQGWKAVEDRDTGEITISKGELTGLQIMSPE 166



 Score = 73.0 bits (177), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 17/150 (11%), Positives = 47/150 (31%), Gaps = 5/150 (3%)

Query: 95   PRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ-KGK 153
               I  +    +      ++ +  G    L+      ++       +       S  + K
Sbjct: 897  NITIDFSTVTNYNTNGSSTIKAVKGDKKSLNTGRAVGEMNGVSISTDGQIYATYSNGQTK 956

Query: 154  VIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT----VKRGFLEDSNANSMYE 209
            ++  +       + G  +  ++  +  +           T    +  G LE SN +   +
Sbjct: 957  LLGQIASAEFANASGLSKEGDNLYASTLNSGEATVQDITTDGGYMNTGVLEMSNVDLSSQ 1016

Query: 210  MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              +MI   + F + + +I  ++  + E   
Sbjct: 1017 FTEMITTQRGFQANSRIITVSDTLLEELTN 1046


>gi|152997582|ref|YP_001342417.1| hypothetical protein Mmwyl1_3580 [Marinomonas sp. MWYL1]
 gi|150838506|gb|ABR72482.1| protein of unknown function DUF1078 domain protein [Marinomonas sp.
           MWYL1]
          Length = 565

 Score = 97.2 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 3/124 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI---KNDIDQKISFVA 60
            FN  L+   A    LS   +N++N DT GF+  +++F ++           +   S V+
Sbjct: 2   GFNTALSGIKASADYLSVTGNNIANADTTGFKKSRIEFDDLYNTSVLGAGSGNNIGSGVS 61

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
             K       G+   T   LD A++G  +F +++      TR G FK+ ++G LV+ SG 
Sbjct: 62  VSKVSQEFSSGNLSYTDNNLDLAIDGSGFFVIDAGIANAYTRAGNFKLDENGFLVTNSGN 121

Query: 121 YPVL 124
               
Sbjct: 122 NVQG 125



 Score = 76.1 bits (185), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 16/143 (11%), Positives = 43/143 (30%), Gaps = 5/143 (3%)

Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLY 161
           R  +  +        A+      +  S         +   +      +Q+   +  + L 
Sbjct: 421 RITQLDLAGSTQFALANTDTFEQNGFSAGELQGVSFDSDGLLIANYTNQQTATLGQIALA 480

Query: 162 SVDMSQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHL 216
           + D + G +   ++         P +           +  G LE+SN +   E+  +I  
Sbjct: 481 TFDSTDGLMPSGHTMWVATKTSGPADIGRPNSATLGKIAGGALEESNVDLTAELVALIEA 540

Query: 217 TQKFNSITTLIDENEKSMLEAIR 239
            + + + +  ++         I 
Sbjct: 541 QRNYQANSKTLETENTVTQTIIN 563


>gi|283955493|ref|ZP_06372988.1| flagellar hook protein flgE [Campylobacter jejuni subsp. jejuni
           1336]
 gi|283792954|gb|EFC31728.1| flagellar hook protein flgE [Campylobacter jejuni subsp. jejuni
           1336]
          Length = 545

 Score = 97.2 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 49/218 (22%), Positives = 85/218 (38%), Gaps = 11/218 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI----KNDIDQKI 56
           M  SF  G++        +   A+N++N +T GF+    +F ++  +       +  Q  
Sbjct: 1   MMNSFYNGISGVKTNSFGIDIYANNIANVNTTGFKYSDAQFKDIFYSTITTQSTNPAQGG 60

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLV 115
               S    +  E GS +++ +E D AL+G  +F +    G    TR+G FK   +G LV
Sbjct: 61  YGSGSASSNVVFEQGSLVASDSEFDVALQGKGFFGVLGADGNAYYTRNGSFKRDANGYLV 120

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
            + G + +  M      I   D +   G  G+    G ++      + + S G     + 
Sbjct: 121 DSYGNFVLGTMNPAFTGINYSDRV--AGLMGDYLNTGTLVNNGFTVNSNNSFGIGTTASQ 178

Query: 176 GISPNIPPTPLEDLSGVTVK-RGFLEDSNANSMYEMGQ 212
           G         L       VK  G L   N N+  E+ +
Sbjct: 179 GAIKVPVNMYLPPQVTQNVKWSGSL---NTNTTTEVVK 213



 Score = 71.8 bits (174), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 7/124 (5%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             D  +                    + K  ++  + LY+    QG     ++  +    
Sbjct: 419 QQDGVAEGFFKQYDISDDGSIVAQFSNGKNAIVGKLALYNFINEQGLAAMGDNIFAATAN 478

Query: 183 P-------TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
                      + ++    K GFLE SN +   E+  +I   + F++ +  I  +++ + 
Sbjct: 479 SGDASFIMKNGQIVNTAKFKGGFLEQSNVDLSVELSNLIVTQKAFDASSKSITTSDQMIQ 538

Query: 236 EAIR 239
           +AI 
Sbjct: 539 KAIN 542


>gi|229096257|ref|ZP_04227230.1| Flagellar basal-body rod protein flgG [Bacillus cereus Rock3-29]
 gi|229115212|ref|ZP_04244622.1| Flagellar basal-body rod protein flgG [Bacillus cereus Rock1-3]
 gi|228668352|gb|EEL23784.1| Flagellar basal-body rod protein flgG [Bacillus cereus Rock1-3]
 gi|228687217|gb|EEL41122.1| Flagellar basal-body rod protein flgG [Bacillus cereus Rock3-29]
          Length = 267

 Score = 97.2 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 42/265 (15%), Positives = 84/265 (31%), Gaps = 25/265 (9%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53
                IG    +   QR++  ++N++N  T GF+   +        +          +I 
Sbjct: 1   MNGLYIGSMGMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAMTNIG 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDF-----ALEGDAWFALESPRGIILTRDGRFKV 108
                V     +++   G+   T +  DF     A    ++F         LTRDG F +
Sbjct: 61  SVDYAVVPAATHVNLVQGNVQITNSATDFFLDDGAAGTSSFFVTSKNDETFLTRDGSFTL 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV----- 163
             D  L ++SG Y +             +   +   +         +    +  +     
Sbjct: 121 NSDRYLQTSSGAYVMDVNNERIRIPENVNFFVSNNGEIYREINEGTLQKPDIKRIVIAQL 180

Query: 164 -------DMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
                  + +   V+REN   +               VK   LE+SN +   EM  ++  
Sbjct: 181 QTKTVDAETNARLVQRENKSFTLAEGNIANLPNGTGIVKNHMLENSNVDMTKEMADLMSS 240

Query: 217 TQKFNSITTLIDENEKSMLEAIRNI 241
            +   +   ++   +K   +    I
Sbjct: 241 QKMIQASQRIMTSFDKIYEKEANEI 265


>gi|600725|gb|AAA92803.1| flagellar hook FlgE [Helicobacter pylori]
          Length = 718

 Score = 97.2 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 66/197 (33%), Gaps = 15/197 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G+    A +  L   ++N++N +T GF+  +  F +++  +            
Sbjct: 1   MLRSLWSGVNGMQAHQIALDIESNNIANVNTTGFKYSRASFVDMLSQVKLIATAPYKNGL 60

Query: 49  -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGR 105
              +       V           G+  +T  + D A++GD +F +   RGI    TRDG 
Sbjct: 61  AGQNDFSVGLGVGVDATTKIFSQGNIQNTDVKTDLAIQGDGFFIINPDRGITRNFTRDGE 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           F     GSLV+  G      + +      +  +   +        +   I    +     
Sbjct: 121 FLFDSQGSLVTTGGLVVQGWVRNGSDTGNKGSDTDALKVDNTGPLENIRIDPGMVMPARA 180

Query: 166 SQGFVRRENSGISPNIP 182
           S     R N     +  
Sbjct: 181 SNRISMRANLNAGRHAD 197



 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 14/128 (10%), Positives = 40/128 (31%), Gaps = 5/128 (3%)

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           +       +       +  + +   V      + +   +A + L +     G      + 
Sbjct: 588 SETYAIEQNGYQAGDLMDVRFDSDGVLLGAFSNGRTLALAQVALANFANDAGLQALGGNV 647

Query: 177 ISPNIPPTPLEDLSGVTVKRGF-----LEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
            S           +  T +RG      LE SN +    +  +I + + F + +  +  ++
Sbjct: 648 FSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQRGFQANSKAVTTSD 707

Query: 232 KSMLEAIR 239
           + +   + 
Sbjct: 708 QILNTLLN 715


>gi|109947758|ref|YP_664986.1| flagellar hook protein FlgE [Helicobacter acinonychis str. Sheeba]
 gi|109714979|emb|CAJ99987.1| flagellar hook protein [Helicobacter acinonychis str. Sheeba]
          Length = 718

 Score = 96.9 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 66/197 (33%), Gaps = 15/197 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G+    A +  L   ++N++N +T GF+  +  F +++  +            
Sbjct: 1   MLRSLWSGVNGMQAHQIALDIESNNIANVNTTGFKYSRASFVDMLSQVKLIATAPYKNGL 60

Query: 49  -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGR 105
              +       V           G+  +T  + D A++GD +F +   RGI    TRDG 
Sbjct: 61  AGQNDFSVGLGVGVDATTKIFSQGNIQNTDVKTDLAIQGDGFFIISPDRGITRNFTRDGE 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           F     GSLV+  G      + +      +  +   +        +   I    +     
Sbjct: 121 FLFDSQGSLVTTGGLVVQGWVRNGNDTGNKGSDTDALKVDNTGPLENIRIDPGMVMPARA 180

Query: 166 SQGFVRRENSGISPNIP 182
           S     R N     +  
Sbjct: 181 SNRISMRANLNAGRHAD 197



 Score = 70.3 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 14/128 (10%), Positives = 40/128 (31%), Gaps = 5/128 (3%)

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           +       +       +  + +   V      + +   +A + L +     G      + 
Sbjct: 588 SETYAIEQNGYQAGDLMDVRFDSDGVLLGAFSNGRTLALAQVALANFANDAGLQALGGNV 647

Query: 177 ISPNIPPTPLEDLSGVTVKRGF-----LEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
            S           +  T +RG      LE SN +    +  +I + + F + +  +  ++
Sbjct: 648 FSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQRGFQANSKAVTTSD 707

Query: 232 KSMLEAIR 239
           + +   + 
Sbjct: 708 QILNTLLN 715


>gi|208434779|ref|YP_002266445.1| flagellar hook protein [Helicobacter pylori G27]
 gi|208432708|gb|ACI27579.1| flagellar hook protein [Helicobacter pylori G27]
          Length = 718

 Score = 96.9 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 66/197 (33%), Gaps = 15/197 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G+    A +  L   ++N++N +T GF+  +  F +++  +            
Sbjct: 1   MLRSLWSGVNGMQAHQIALDIESNNIANVNTTGFKYSRASFVDMLSQVKLIATAPYKNGL 60

Query: 49  -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGR 105
              +       V           G+  +T  + D A++GD +F +   RGI    TRDG 
Sbjct: 61  AGQNDFSVGLGVGVDATTKIFSQGNIQNTDVKTDLAIQGDGFFIISPDRGITRNFTRDGE 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           F     GSLV+  G      + +      +  +   +        +   I    +     
Sbjct: 121 FLFDSQGSLVTTGGLVVQGWVRNGSDTGNKGSDTDALKVDNTGPLENIRIDPGMVMPARA 180

Query: 166 SQGFVRRENSGISPNIP 182
           S     R N     +  
Sbjct: 181 SNRISMRANLNAGRHAD 197



 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 14/128 (10%), Positives = 40/128 (31%), Gaps = 5/128 (3%)

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           +       +       +  + +   V      + +   +A + L +     G      + 
Sbjct: 588 SETYAIEQNGYQAGDLMDVRFDSDGVLLGAFSNGRTLALAQVALANFANDAGLQALGGNV 647

Query: 177 ISPNIPPTPLEDLSGVTVKRGF-----LEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
            S           +  T +RG      LE SN +    +  +I + + F + +  +  ++
Sbjct: 648 FSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQRGFQANSKAVTTSD 707

Query: 232 KSMLEAIR 239
           + +   + 
Sbjct: 708 QILNTLLN 715


>gi|167630298|ref|YP_001680797.1| flagellar hook protein [Heliobacterium modesticaldum Ice1]
 gi|167593038|gb|ABZ84786.1| flagellar hook protein [Heliobacterium modesticaldum Ice1]
          Length = 442

 Score = 96.9 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 50/137 (36%), Gaps = 12/137 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  S   G+ A    + R+ T+ +N++N +T+GF+  +V F++ +               
Sbjct: 1   MMRSLFSGVTALRNHQTRMDTIGNNIANVNTIGFKKSRVTFADALNQTIRGASSPQGGRG 60

Query: 61  SGKEYL------------SKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                                  S   TG   D A+EGD +F L+       TR G F +
Sbjct: 61  GTNPMQVGLGMNIATMETVFTPASVQGTGKNSDLAIEGDGFFLLDDGGARYYTRAGNFDL 120

Query: 109 TDDGSLVSASGKYPVLD 125
             + + +       V+ 
Sbjct: 121 DTEYNFIRTDNGMKVMG 137



 Score = 81.8 bits (200), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 13/98 (13%), Positives = 34/98 (34%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLED 201
             + + + +A + + +     G  +  ++  +                    +  G LE 
Sbjct: 342 YSNGQNRKMAQVAVTTFSNPAGLFKAGSNLYTRTNNSGEPKTGQPAVGGRGAITPGALEM 401

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E   MI   + F + + +I  ++  + E + 
Sbjct: 402 SNVDLSQEFTDMITTQRGFQANSRIISVSDSMLEELVN 439


>gi|313673416|ref|YP_004051527.1| fagellar hook-basal body protein [Calditerrivibrio nitroreducens
           DSM 19672]
 gi|312940172|gb|ADR19364.1| fagellar hook-basal body protein [Calditerrivibrio nitroreducens
           DSM 19672]
          Length = 822

 Score = 96.9 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 59/179 (32%), Gaps = 14/179 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50
           M  S    ++     ++ +  + +N+SN +TVG++  ++ F +++    +          
Sbjct: 1   MLRSLYSAVSGLSQHQKAMDVLGNNVSNVNTVGYKASRLTFKDLMSQTVSIGKAPSGNIG 60

Query: 51  --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI--ILTRDGRF 106
             +  Q                G+F +TG   D A++G  +F +   +      TR G F
Sbjct: 61  GINPLQIGLGTNVASVDNIFLQGTFQTTGVTTDLAIDGKGFFIVRGEQQTERYYTRAGNF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
                G LV+  G      M  +       +      + G          T  +     
Sbjct: 121 SFDRQGYLVNPEGFRVQGWMTDLTTGQLLNNADITDIQMGAAQMTLAAKQTSEVTLAGN 179



 Score = 78.0 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 14/92 (15%), Positives = 36/92 (39%), Gaps = 5/92 (5%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSM 207
           K++  + +      +G  R  +S  S                    ++ G +E+SN +  
Sbjct: 728 KILGQIAVAIFTNQEGLARVGSSLFSETPNSGLAAIGVAGAGGRGVIQSGAVENSNVDIA 787

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            E   MI + + + + + +I  +++ + E + 
Sbjct: 788 QEFVTMITVQRGYQTNSRVITTSDEMLQELLN 819


>gi|228933056|ref|ZP_04095919.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|228826657|gb|EEM72428.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
          Length = 249

 Score = 96.9 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 85/246 (34%), Gaps = 15/246 (6%)

Query: 11  AQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DIDQKISFVASG 62
             +   QR++  ++N++N  T GF+   +        +          +I      V   
Sbjct: 2   GMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIGSVDYAVVPA 61

Query: 63  KEYLSKEVGSFISTGTELDFALEGDA-----WFALESPRGIILTRDGRFKVTDDGSLVSA 117
             +++   G+   T ++ DF L+        +F         LTRDG F +  D  L + 
Sbjct: 62  ATHVNLVQGNIQMTNSDTDFLLDDGTAGTASFFVTSKNNETFLTRDGSFTLNSDRYLQTT 121

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV--DMSQGFVRRENS 175
           SG + + +                       +     IA +   +V  + +   ++REN 
Sbjct: 122 SGAFVMGENHERIRIPEGAKVAVQADGTLYDAVTQNNIARLQTKTVGAEANNRLIQRENK 181

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
             +              TVK   LE+SN +   EM  ++   +  ++   ++   +K   
Sbjct: 182 SFTLAEGNIADLPNGVGTVKNYMLENSNVDMTKEMADLMTDQRMISASQRVMTSFDKIYE 241

Query: 236 EAIRNI 241
           +    I
Sbjct: 242 KEANEI 247


>gi|307719964|ref|YP_003891104.1| flagellar hook protein FlgE [Sulfurimonas autotrophica DSM 16294]
 gi|306978057|gb|ADN08092.1| flagellar hook protein FlgE [Sulfurimonas autotrophica DSM 16294]
          Length = 709

 Score = 96.9 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 73/222 (32%), Gaps = 15/222 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G++   + +  +   ++N++N +TVGF+  +  FS+++               
Sbjct: 1   MLKSLFSGVSGLQSHQVAMDVESNNIANVNTVGFKYSRANFSDLLAQTKAIATAPQGQLG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGRF 106
             +  Q                GS  ++    D A++GD +F +    G     TR G F
Sbjct: 61  GKNPVQVGLGSTVSSMTRIFSQGSIQNSDKNTDVAIQGDGFFIISPDGGNTYKYTRAGDF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           K    G+ V  +G      +      ++     I N+     ++   +    + L +   
Sbjct: 121 KFDAGGNFVDNNGFIAQGWLRDPVTGKVDSTAPIENINIAPGLTTPAQPTQEVVLKANLN 180

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSM 207
           S   V   +              L  +      +E  N   M
Sbjct: 181 SGAIVESFSPAYQVPTGAPTDPALPAIDGNGNPIESGNVGVM 222



 Score = 70.3 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 14/120 (11%), Positives = 39/120 (32%), Gaps = 5/120 (4%)

Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183
            D  +    +  + +          + +   +A +G+     ++G      +        
Sbjct: 586 QDGYTGGDLVGIRIDQSGTLVGSFSNGRSFGLAQIGMAKFTNNEGLSTEGGNVYVQTANS 645

Query: 184 TPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
                 +  T     ++   LE SN +    + Q+I + + F +    I  +++ +   I
Sbjct: 646 GDPIIGTAATAGRGFIQSAALEASNVDLSRALTQLIIIQRGFQANGKTITTSDQLLQTLI 705


>gi|325289233|ref|YP_004265414.1| fagellar hook-basal body protein [Syntrophobotulus glycolicus DSM
           8271]
 gi|324964634|gb|ADY55413.1| fagellar hook-basal body protein [Syntrophobotulus glycolicus DSM
           8271]
          Length = 447

 Score = 96.9 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/141 (21%), Positives = 61/141 (43%), Gaps = 16/141 (11%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  +    ++   A ++++  + +N++N +TV ++  +V FS+++               
Sbjct: 1   MMRALFSAVSGLQAHQKKMDVIGNNIANVNTVAYKASRVTFSDILSQTLSSATGADSTSG 60

Query: 49  --KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL--TRDG 104
              ++  Q    V  G        GS  STG   D +++GD +F +++        TR G
Sbjct: 61  RGGSNAKQIGLGVGIGSIDTLMTAGSTESTGNSTDLSIDGDGFFIVKNGSTGTYMFTRAG 120

Query: 105 RFKVTDDGSLVSASGKYPVLD 125
            F + D G+LV++ G      
Sbjct: 121 NFSIDDSGNLVTSDGLNVYGW 141



 Score = 83.0 bits (203), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 40/138 (28%), Gaps = 6/138 (4%)

Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162
                 + D   V   G           I I     I  V   G     G +     L  
Sbjct: 310 FSNLSTSADDGSVETKGVDGYPSGTLEDISIDSNGIILGVYSNGIEQPLGMI----ALAR 365

Query: 163 VDMSQGFVRRENSGISPNIPPTPLEDL--SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
                G ++  ++            +   +   +  G LE SN +   E  QMI   + +
Sbjct: 366 FANPSGLLKTGSNYYVATANSGEFTNGVMANGALSSGTLEMSNVDLSTEFSQMITTQRGY 425

Query: 221 NSITTLIDENEKSMLEAI 238
            + + +I   ++ +   I
Sbjct: 426 QANSRMITTADEMLETII 443


>gi|152990377|ref|YP_001356099.1| flagellar basal body and hook protein FlgE [Nitratiruptor sp.
           SB155-2]
 gi|151422238|dbj|BAF69742.1| flagellar basal body and hook protein FlgE [Nitratiruptor sp.
           SB155-2]
          Length = 533

 Score = 96.9 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 73/204 (35%), Gaps = 17/204 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS--- 57
           M  SF  G +   A +  L  ++DN++N +T GF+  +V FS++V +         +   
Sbjct: 1   MLQSFYTGNSGLNANKTWLGVISDNIANVNTNGFKQERVNFSDLVASSLTTYSSSGAPRN 60

Query: 58  -----FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG--IILTRDGRFKVTD 110
                             GSF +T   L  AL+G+ +F +++P       TR G F+V  
Sbjct: 61  KEIGGGAFVAGTIKDFSQGSFKNTNQPLSLALDGEGFFMVKNPSADLTYYTRAGDFRVDA 120

Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170
           +G +++ +G      M      I       N+    +     KV         +      
Sbjct: 121 NGDVINPAGLKLQGWMLDETGNIAGAMGSINIPNNLDPKNTDKVA-------FENPANLD 173

Query: 171 RRENSGISPNIPPTPLEDLSGVTV 194
              ++      P  P       T+
Sbjct: 174 AGVDAITKTFDPSDPTTYHYVNTI 197



 Score = 78.8 bits (192), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 13/86 (15%), Positives = 32/86 (37%), Gaps = 3/86 (3%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPL---EDLSGVTVKRGFLEDSNANSMYEMG 211
           +A + + +    +  VR+ ++   PN                ++ G LE SN +   E  
Sbjct: 443 VARLAVATFKDKEILVRKGDNLYLPNQQTFTPIIVPGGVISKIRSGMLEMSNVDISQEFI 502

Query: 212 QMIHLTQKFNSITTLIDENEKSMLEA 237
            +I   + + +    I  +++ +   
Sbjct: 503 NLITAQRAYQANAKTITTSDQILQTT 528


>gi|167750722|ref|ZP_02422849.1| hypothetical protein EUBSIR_01700 [Eubacterium siraeum DSM 15702]
 gi|167656401|gb|EDS00531.1| hypothetical protein EUBSIR_01700 [Eubacterium siraeum DSM 15702]
          Length = 521

 Score = 96.9 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 32/137 (23%), Positives = 54/137 (39%), Gaps = 13/137 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-------- 52
           M  S   G++     +Q++  + +N++N +T GF+T    F EV    K +         
Sbjct: 1   MVRSLFSGVSGLKTHQQKMDVIGNNIANVNTTGFKTSVTTFQEVYYQTKKNGSAGSNLQG 60

Query: 53  ----DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFK 107
                Q       G          F  + +  D AL GD +F +      I  +R G F 
Sbjct: 61  GVNPSQVGYGTKLGAIGQVMGQSGFTYSDSVYDCALSGDGFFQVMDEAGNIFYSRAGVFN 120

Query: 108 VTDDGSLVSASGKYPVL 124
           V + G+LV ++G   + 
Sbjct: 121 VDNAGNLVDSNGNMVLG 137



 Score = 84.1 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 23/143 (16%), Positives = 47/143 (32%), Gaps = 10/143 (6%)

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-----IATMGLY 161
                  +V   G   + D      Q  +  +   + E G I     V     +  + + 
Sbjct: 376 SNNFFSDMVQLLGNIKMTDGRVAATQTVKDLDSVYINEDGTIYGVHSVHGIIMLGRIDIV 435

Query: 162 SVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
           + D   G  +  +S     +     +     +    +V  G LE SN +   E   MI  
Sbjct: 436 TFDNPNGLEQVGSSYWRETLSSGQPQVNIAGENGSASVVSGALEMSNVDLSQEFSDMIIT 495

Query: 217 TQKFNSITTLIDENEKSMLEAIR 239
            + F + + +I  ++  + E + 
Sbjct: 496 QRGFQANSRIITTSDTMLEEIVN 518


>gi|315125109|ref|YP_004067113.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|315018831|gb|ADT66924.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 855

 Score = 96.9 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 59/183 (32%), Gaps = 14/183 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G++   A +  +    +N+SN +T GF+  +  F  +                
Sbjct: 1   MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATAPTDGRG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106
            ++  Q    V+          GS  +T    D A+ GD +F +         LTR G F
Sbjct: 61  GSNPLQIGLGVSVSSTTRIHSQGSVQTTDKNTDVAINGDGFFMVSDDGGLTRYLTRSGDF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           K+   G+ V+ +G        +   Q                       +T      +++
Sbjct: 121 KLDAYGNFVNNAGFVVQGWNINWDTQSIDSSRTPQNIFIDPGMHIPAAKSTEVAIKANLN 180

Query: 167 QGF 169
            G 
Sbjct: 181 SGL 183



 Score = 74.1 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 17/144 (11%), Positives = 46/144 (31%), Gaps = 5/144 (3%)

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           T      +    S  + +G+      +        + +          + K   +A + +
Sbjct: 709 TSGSNDGLVSSNSASTLTGQATDGYTSGNLKPDAIRVDDKGNILGEFTNGKTFAVAKIAM 768

Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIH 215
            SV  + G      +          +      T     +K   LE SN +    + ++I 
Sbjct: 769 ASVANNSGLEEIGGNLFKVTANSGNIVVGEAGTGGRGEMKTSALEMSNVDLSRSLTELII 828

Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239
           + + + + +  I  +++ +   I+
Sbjct: 829 IQRGYQANSKTISTSDQMLQTLIQ 852


>gi|86152379|ref|ZP_01070589.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|85840676|gb|EAQ57928.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           260.94]
          Length = 854

 Score = 96.9 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 59/183 (32%), Gaps = 14/183 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G++   A +  +    +N+SN +T GF+  +  F  +                
Sbjct: 1   MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATAPTDGRG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106
            ++  Q    V+          GS  +T    D A+ GD +F +         LTR G F
Sbjct: 61  GSNPLQIGLGVSVSSTTRIHSQGSVQTTDKNTDVAINGDGFFMVSDDGGLTRYLTRSGDF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           K+   G+ V+ +G        +   Q                       +T      +++
Sbjct: 121 KLDAYGNFVNNAGFVVQGWNINWDTQSIDSSRTPQNIFIDPGMHIPAAKSTEVAIKANLN 180

Query: 167 QGF 169
            G 
Sbjct: 181 SGL 183



 Score = 74.1 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 17/144 (11%), Positives = 46/144 (31%), Gaps = 5/144 (3%)

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           T      +    S  + +G+      +        + +          + K   +A + +
Sbjct: 708 TSGSNDGLVSSNSASTLTGQATDGYTSGNLKPDAIRVDDKGNILGEFTNGKTFAVAKIAM 767

Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIH 215
            SV  + G      +          +      T     +K   LE SN +    + ++I 
Sbjct: 768 ASVANNSGLEEIGGNLFKVTANSGNIVVGEAGTGGRGEMKTSALEMSNVDLSRSLTELII 827

Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239
           + + + + +  I  +++ +   I+
Sbjct: 828 IQRGYQANSKTISTSDQMLQTLIQ 851


>gi|222530130|ref|YP_002574012.1| hypothetical protein Athe_2164 [Caldicellulosiruptor bescii DSM
           6725]
 gi|222456977|gb|ACM61239.1| protein of unknown function DUF1078 domain protein
           [Caldicellulosiruptor bescii DSM 6725]
          Length = 488

 Score = 96.9 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 65/155 (41%), Gaps = 15/155 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S    ++A  A + R+  + DN++N +TVGF++ +V F+ V  ++            
Sbjct: 1   MMRSMFSSISALRAHQTRMDVIGDNIANVNTVGFKSSRVTFASVFASVLKSASAPDTASG 60

Query: 49  --KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGR 105
              ++  Q    V+     ++   GS   T    D A+EGD +F +    +    TR G 
Sbjct: 61  RGGSNPMQIGLGVSVASVDMNMTRGSLQRTDNPTDLAIEGDGFFVVGGDGKAPRFTRAGN 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF 140
           F +   G+LV+A+G   +  M           +  
Sbjct: 121 FSLDKMGNLVTATGLNVLGWMYDPVNNQIDTTKSP 155



 Score = 88.0 bits (216), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 21/210 (10%), Positives = 56/210 (26%), Gaps = 6/210 (2%)

Query: 36  TIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP 95
              + F +    + ++    +  +A              +   + +              
Sbjct: 276 RGTITFGQAGKVLDDENTPDVEGIAITGGRFINTQNGTFTINFKNNVVNPVTLKVNSSQF 335

Query: 96  RGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQK-GKV 154
                T    F           S              +   +   +    G  S    ++
Sbjct: 336 DVNDATNIAFFLKNITQFGNMESSIRVAQMTGYSAGSLQGFNVDASGKITGVYSNGLNQL 395

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYE 209
           I  + + +     G  R  ++     +     E  +       T+ +G LE SN +   E
Sbjct: 396 IGQIAIATFANPAGLQRIGDNLYINTVNSGDPEIGTPGSGSRGTISQGTLEMSNVDLAKE 455

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              MI   + + +   +I  +++ + + + 
Sbjct: 456 FTDMIVTQRGYQANARVITASDELLQDLVN 485


>gi|125972995|ref|YP_001036905.1| protein of unknown function DUF1078-like protein [Clostridium
           thermocellum ATCC 27405]
 gi|256004792|ref|ZP_05429767.1| protein of unknown function DUF1078 domain protein [Clostridium
           thermocellum DSM 2360]
 gi|281417206|ref|ZP_06248226.1| fagellar hook-basal body protein [Clostridium thermocellum JW20]
 gi|125713220|gb|ABN51712.1| protein of unknown function DUF1078-like protein [Clostridium
           thermocellum ATCC 27405]
 gi|255991242|gb|EEU01349.1| protein of unknown function DUF1078 domain protein [Clostridium
           thermocellum DSM 2360]
 gi|281408608|gb|EFB38866.1| fagellar hook-basal body protein [Clostridium thermocellum JW20]
 gi|316940769|gb|ADU74803.1| flagellar hook-basal body protein [Clostridium thermocellum DSM
           1313]
          Length = 440

 Score = 96.9 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 54/142 (38%), Gaps = 16/142 (11%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++   A + ++  + +N++N +TVGF++ +V F EV                
Sbjct: 1   MMRSMFSGVSGLQAHQTKMDVIGNNVANVNTVGFKSSRVTFQEVFSQTLKGASSPDPTTG 60

Query: 54  -------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDG 104
                  Q    +           GS   T    D A+EGD +F ++         TR G
Sbjct: 61  RGGTNPMQVGLGLGVATIDTLMTRGSVQRTDNPTDLAIEGDGFFIVKGGSSDTFKFTRAG 120

Query: 105 RFKVTDDGSLVSASGKYPVLDM 126
            F +   G+LV+ SG       
Sbjct: 121 NFGIDRLGNLVTGSGLNVYGWQ 142



 Score = 89.2 bits (219), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 27/199 (13%), Positives = 57/199 (28%), Gaps = 13/199 (6%)

Query: 47  AIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106
            + +      S       +  +      S  T     +   +  +      +  +R   +
Sbjct: 246 QVDSGNGVTASGATGTILFDDQGQVIESSAVTPSITIIPDSSVGSQNINVKLDFSRLTMY 305

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
                    +  G       + V   I     I  +   G+    G +     L S D  
Sbjct: 306 AADSSAKATNVDGYPA---GSLVTFSIGSDGMIMGIYSNGQQQPLGLI----ALASFDNP 358

Query: 167 QGFVRRENSGISPNIPPTPLEDL------SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
            G  +   +   P       +           T+  G LE SN +   E  +MI   + F
Sbjct: 359 AGLEKVGENMYIPTSNSGEFKKGVKAGTEGVGTLSPGTLEMSNVDLSKEFTEMIITQRGF 418

Query: 221 NSITTLIDENEKSMLEAIR 239
            + + +I  +++ + E + 
Sbjct: 419 QANSRIITTSDEMLQELVN 437


>gi|325295417|ref|YP_004281931.1| fagellar hook-basal body protein [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325065865|gb|ADY73872.1| fagellar hook-basal body protein [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 568

 Score = 96.5 bits (238), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 65/184 (35%), Gaps = 15/184 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-------D 53
           M  SF        A +  LS ++DN++N +TVGF+     F +++               
Sbjct: 1   MLQSFYTAFTGLNADKTWLSVISDNIANVNTVGFKKENAVFEDLLARSLTTFKNGAPVNQ 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDG 112
           +                G+F++T   LD AL+G+ +F ++   G    TR+G F++  +G
Sbjct: 61  EIGGGTFISTTVKDFSQGTFMNTNNPLDLALDGEGFFMVKDETGVTYYTRNGEFRLDANG 120

Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172
            L++  G      M      +       N+       +  ++         +       R
Sbjct: 121 DLINMLGMKVQGWMLDEQGNLAGAVGAINIPMDMPPKETTEI-------KFESPSNLDSR 173

Query: 173 ENSG 176
               
Sbjct: 174 VEDA 177



 Score = 81.8 bits (200), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 26/142 (18%), Positives = 48/142 (33%), Gaps = 3/142 (2%)

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           T D      D   + S    Y   D  S    +               + K K IA + +
Sbjct: 424 TIDISSFWNDLKQVASDFIFYAQQDGNSKGDIMSVAVSEDGTIRATYTNGKVKDIARLAV 483

Query: 161 YSVDMSQGFVRRENSGISPNIPPTP---LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217
            +    +  VR+ N    PN+       +       V+ G LE SN +   E   +I   
Sbjct: 484 ATFKDKEMLVRKGNWLYVPNVQTFTPVIMPGGVISKVRSGMLEMSNVDIASEFINLITAQ 543

Query: 218 QKFNSITTLIDENEKSMLEAIR 239
           + + +   +I  +++ + E + 
Sbjct: 544 RAYQANARVITTDDQILQETMN 565


>gi|119469950|ref|ZP_01612755.1| flagellar hook protein E [Alteromonadales bacterium TW-7]
 gi|119446660|gb|EAW27933.1| flagellar hook protein E [Alteromonadales bacterium TW-7]
          Length = 454

 Score = 96.5 bits (238), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 40/167 (23%), Positives = 64/167 (38%), Gaps = 5/167 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61
           SFNI L    A ++ L   A+N++N +T GF+  + +F++V  +    +   +    V +
Sbjct: 2   SFNIALTGIAAAQKDLDVTANNIANVNTTGFKESRAEFADVYASSVFSSGRTKNGDGVQT 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESP---RGIILTRDGRFKVTDDGSLVSAS 118
                    GS   T   LD A+ G+ +FA+      +    TR G FK+  D  +V A 
Sbjct: 62  TMVAQQFHQGSLQFTNNSLDLAITGEGYFAMSQDLGAQDFTYTRAGAFKLDKDNFVVDAK 121

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           G Y                 +            G   AT  +YS   
Sbjct: 122 GNYLQGFPVDEATGDTTSVSLSTSSALQIPDSSGSPRATTNVYSSFN 168



 Score = 69.1 bits (167), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 14/101 (13%), Positives = 35/101 (34%), Gaps = 6/101 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLED 201
             +     +  + +     SQG  +  ++    ++           +     +    LE 
Sbjct: 355 YSNGDSTFLGQVAMVRFSNSQGLQQVGDTAWKKSLTSGEPIAGEPGSGTLGSINSSALEQ 414

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           SN N   E+  +I   + F + +  ++    ++ +AI  I 
Sbjct: 415 SNVNLTNELVDLISAQRNFQANSRALE-VNSTLQQAILQIR 454


>gi|46579854|ref|YP_010662.1| flagellar hook protein FlgE [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120602680|ref|YP_967080.1| hypothetical protein Dvul_1636 [Desulfovibrio vulgaris DP4]
 gi|46449270|gb|AAS95921.1| flagellar hook protein FlgE [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120562909|gb|ABM28653.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           vulgaris DP4]
 gi|311234145|gb|ADP86999.1| flagellar hook-basal body protein [Desulfovibrio vulgaris RCH1]
          Length = 564

 Score = 96.5 bits (238), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 64/169 (37%), Gaps = 5/169 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA---IKNDIDQKISFVA 60
           S   G++  LA  +R++ + +N++N +TVGF+  ++ F + +         + Q    V+
Sbjct: 6   SMWTGVSGLLAHGERMNVLGNNIANVNTVGFKGSRMDFEDFLNQDTYSAAGVTQVGRGVS 65

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRFKVTDDGSLVSAS 118
            G  +     G+F +T    D A++G  +F+++         TR G F+   DG LV   
Sbjct: 66  IGAIFGDYSQGAFQTTNESTDLAIQGRGFFSVKPKGTEDTYYTRAGNFRFDADGYLVDPH 125

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           G                   +       +I   G  +           Q
Sbjct: 126 GYVLQGWAIERSQNSLTSSAVTATSTTSKIKGSGVPVDIKLDGFTAEPQ 174



 Score = 76.4 bits (186), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 55/206 (26%), Gaps = 11/206 (5%)

Query: 39  VKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98
             FS +  +         +F+      L     +   T T    A+  DA      P   
Sbjct: 362 ANFSGLTDSSVVGSPTAQNFLMELDLGLRSTNATTPWTSTPNAAAIGTDASLL---PGLT 418

Query: 99  ILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158
              R      +  GS  +        D  +         +   + +    +     +  +
Sbjct: 419 SSQRQPSATTSYAGSSSTQF---QKQDGYTFGFLQNITVDRDGIMQGKYSNGVTLDLYQV 475

Query: 159 GLYSVDMSQGFVRRENSGISPNIP-----PTPLEDLSGVTVKRGFLEDSNANSMYEMGQM 213
            L      Q   R   +  S         P P        +    LE SN +   E  +M
Sbjct: 476 TLVDFTSKQNLRREGGNLFSGTRDSGDPLPGPANSNGLGAISSNSLEQSNVDLAREFVEM 535

Query: 214 IHLTQKFNSITTLIDENEKSMLEAIR 239
           I   + F S + +I   +  +   + 
Sbjct: 536 ITTQRGFQSNSKVITTTDTMLEVVVN 561


>gi|218886899|ref|YP_002436220.1| hypothetical protein DvMF_1808 [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218757853|gb|ACL08752.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           vulgaris str. 'Miyazaki F']
          Length = 501

 Score = 96.5 bits (238), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 54/162 (33%), Gaps = 7/162 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +   G      L Q +  V++N++N +TVGF+  +  F +++       +       
Sbjct: 1   MLRALYSGATGMKTLAQGMQAVSNNLANVNTVGFKQQQALFEDLMSQYAGTGNSASTSIS 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113
           Q                GS+ S     D ++ G  +F +        TR G F+    G+
Sbjct: 61  QVGLGSRLTDIRTVYGQGSYESGTDITDLSINGKGFFQVSLGGKTHYTRAGNFRFDKGGN 120

Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI 155
           LV  +G        +  ++          G  G      K  
Sbjct: 121 LVDPNGFVLNGRAITNGVEGATGPISLPPGADGRNVMPAKAT 162



 Score = 66.0 bits (159), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 34/97 (35%), Gaps = 5/97 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLED 201
             + +   +  + LY      G  R   +  S  +     ++      +  TV    LE 
Sbjct: 400 YSNGQNDDLYHITLYRFTSEDGLRREGMNHFSATLESGAAQEGLPDTQNYGTVAAKSLEQ 459

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           SN +   E   MI   + F + +  I   +  + +A+
Sbjct: 460 SNVSMEREFVNMIIYQRGFQTNSKSIMTADSMIQKAL 496


>gi|46578723|ref|YP_009531.1| flagella basal body rod domain-containing protein [Desulfovibrio
           vulgaris str. Hildenborough]
 gi|120603713|ref|YP_968113.1| hypothetical protein Dvul_2674 [Desulfovibrio vulgaris DP4]
 gi|46448135|gb|AAS94790.1| flagella basal body rod domain protein [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120563942|gb|ABM29686.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           vulgaris DP4]
 gi|311232595|gb|ADP85449.1| flagellar hook-basal body protein [Desulfovibrio vulgaris RCH1]
          Length = 498

 Score = 96.5 bits (238), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 63/165 (38%), Gaps = 7/165 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK-------NDID 53
           M      G        + ++ V +N++N +T+GF+   + + +++   +       + I 
Sbjct: 1   MMHGLYTGATGMRTQAEGMNVVGNNLANVNTIGFKQSMMLYQDLMSQTEPTGSAYVSGIS 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113
           Q       G   + +  G+ ++     DFA+ G  +F + S +    TR G F+   DG 
Sbjct: 61  QVGLGARVGDVRVLRSQGALLAGSDTTDFAISGKGFFQVTSGQDTHYTRAGNFRFNKDGQ 120

Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158
           LV  +G   +    +   + P           G +S   K    M
Sbjct: 121 LVDPNGFNLMGHAITGETEGPLAAVTLVKDADGRLSMPAKATGGM 165



 Score = 73.7 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 12/83 (14%), Positives = 28/83 (33%), Gaps = 5/83 (6%)

Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIH 215
           +      G      +  S        ++      +   +    LE SN +   EM  MI 
Sbjct: 412 FRFTSEDGLRSEGMNHYSATTESGAAQEGKADTENYGKLMGKSLEQSNVDMAREMVNMIV 471

Query: 216 LTQKFNSITTLIDENEKSMLEAI 238
             + F + + ++   +  + +A+
Sbjct: 472 TQRGFQTNSKVVTTADTMIQKAL 494


>gi|283956177|ref|ZP_06373662.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           1336]
 gi|283792331|gb|EFC31115.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           1336]
          Length = 848

 Score = 96.5 bits (238), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 58/183 (31%), Gaps = 14/183 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G++   A +  +    +N+SN +T GF+  +  F  +                
Sbjct: 1   MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATTPTDGRG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106
             +  Q    V+          GS  +T    D A+ GD +F +         LTR G F
Sbjct: 61  GQNPLQIGLGVSVSSTTRIHSQGSVQTTDKNTDVAINGDGFFMVSDDGGLTNYLTRSGDF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           K+   G+ V+ +G        +   Q                       +T      +++
Sbjct: 121 KLDAYGNFVNNAGYVVQGWNINWDDQTIDSSRTPQNIFIDPGMHIPAAKSTEVAIKANLN 180

Query: 167 QGF 169
            G 
Sbjct: 181 SGL 183



 Score = 73.0 bits (177), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 17/144 (11%), Positives = 46/144 (31%), Gaps = 5/144 (3%)

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           T      +    S  + +G+      +        + +          + K   +A + +
Sbjct: 702 TSGSNDGLVSSNSASTLTGQATDGYTSGNLKPDAIRVDDKGNILGEFTNGKTFAVAKIAM 761

Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIH 215
            SV  + G      +          +      T     +K   LE SN +    + ++I 
Sbjct: 762 ASVANNSGLEEIGGNLFKVTANSGNIVVGEAGTGGRGEMKTSALEMSNVDLSRSLTELII 821

Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239
           + + + + +  I  +++ +   I+
Sbjct: 822 IQRGYQANSKTISTSDQMLQTLIQ 845


>gi|158423059|ref|YP_001524351.1| putative flagellar basal body rod protein [Azorhizobium caulinodans
           ORS 571]
 gi|158329948|dbj|BAF87433.1| putative flagellar basal body rod protein [Azorhizobium caulinodans
           ORS 571]
          Length = 257

 Score = 96.5 bits (238), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 82/249 (32%), Gaps = 25/249 (10%)

Query: 7   IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66
           IG +   A   +++TVADN +N  T G R +  +                + VA+G  + 
Sbjct: 15  IGASGLRAQVVKVATVADNTANARTPGHRKVAAE---------TTSAPAGAGVATGLRHY 65

Query: 67  SKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYPVLD 125
               G+  +TG+  D  + GD +F +   +   +LTR G F        +  +  Y ++ 
Sbjct: 66  ISSAGTASATGSPTDMMVSGDGFFMVSDGKGNTLLTRSGNFAFDAQSGQLKNAAGYALMA 125

Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLY-----------SVDMSQGFVRREN 174
             +                  ++   G + +T               +     G      
Sbjct: 126 TPNGGGAPTPVQLTAEQASSLKVGADGTLASTDADGRSQALYRIPLATTANPDGMTPVAG 185

Query: 175 SGISPNIPPTPLEDL----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
               P     P           T++ G+LEDSN +   EM  ++     F +    +   
Sbjct: 186 DAFQPGSASGPARTFVSGQGPGTIRAGYLEDSNVDMATEMTDLVTSQASFMANFRTVRMG 245

Query: 231 EKSMLEAIR 239
            + +   + 
Sbjct: 246 IEMLDVVLN 254


>gi|315657509|ref|ZP_07910391.1| flagellar hook protein FlgE [Mobiluncus curtisii subsp. holmesii
           ATCC 35242]
 gi|315491981|gb|EFU81590.1| flagellar hook protein FlgE [Mobiluncus curtisii subsp. holmesii
           ATCC 35242]
          Length = 484

 Score = 96.5 bits (238), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 62/169 (36%), Gaps = 14/169 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50
           M  S   G++     +  L   ++N++N +T GF++   +F +    +            
Sbjct: 1   MLRSLFTGISGLSVHQTMLDVTSNNIANVNTTGFKSASTRFEDTFSQLVRSGAAPRLNER 60

Query: 51  ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRF 106
              +  Q    V       +   G+   TG  LD  + GD ++   ++    + TR+G F
Sbjct: 61  GGMNPAQVGLGVKLQSITQNFTGGAAQMTGRNLDTMINGDGFYVLRKTNGSSVYTRNGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI 155
            +   G +V+A G +    M      I       N+      + +G+  
Sbjct: 121 GLDAQGQVVAADGSFVQGWMGDKDGTINASGTPGNITLPLTKTVEGRPT 169



 Score = 81.5 bits (199), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 18/135 (13%), Positives = 44/135 (32%), Gaps = 10/135 (7%)

Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-----EISQKGKVIATMGLYSVDMSQGF 169
           ++  G         V   +      ++V   G       +   + +A + + S     G 
Sbjct: 347 LTGFGGVNNFGQKQVDGNMAGYMTGYSVEADGTIRGTFSNGDNRALARIAVASFANPLGL 406

Query: 170 VRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224
            +  +S           +     T     +  G +E SN +   E   +I   + F + +
Sbjct: 407 EKAGSSYFVETGNSGQPQIGEAGTGQRGAMTGGAIEMSNVDLAAEFTNLILSQRGFQANS 466

Query: 225 TLIDENEKSMLEAIR 239
            +I  +++ + E + 
Sbjct: 467 RVITTSDEILQELVN 481


>gi|332533175|ref|ZP_08409044.1| flagellar hook protein FlgE [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332037457|gb|EGI73911.1| flagellar hook protein FlgE [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 455

 Score = 96.5 bits (238), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 65/185 (35%), Gaps = 5/185 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61
           SFNI L    A ++ L   A+N++N +T GF+  + +F++V  +    +   +    V +
Sbjct: 2   SFNIALTGLAAAQKDLDVTANNIANVNTTGFKESRAEFADVYASSVFSSGKTKNGDGVQT 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESP---RGIILTRDGRFKVTDDGSLVSAS 118
                    GS   T   LD A+ G+ +FA+      + +  TR G FK+  D  +V A 
Sbjct: 62  TMVAQQFHQGSLQFTNNSLDLAITGEGYFAMTDDLSSQDLTYTRAGAFKLNQDNFMVDAK 121

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178
           G +                 +            G   AT  ++                 
Sbjct: 122 GNFLQAFPVDSSTGDTTSVSLSTTDPIQIPDSSGSPRATENVFLSFNLDATADAPGIAFD 181

Query: 179 PNIPP 183
           P    
Sbjct: 182 PTSSG 186



 Score = 65.7 bits (158), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 12/98 (12%), Positives = 32/98 (32%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLED 201
             +     +  + +     SQG  +  ++    +I           +     +    LE 
Sbjct: 356 YSNGDSTFLGQVAMVRFPNSQGLSQVGDTSWKQSIDSGEPVAGEAGSGTFGGINSSALEQ 415

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN N   E+  +I   + + + +  ++ N       ++
Sbjct: 416 SNTNLTNELVDLITAQRNYQANSRALEVNSTIQQSILQ 453


>gi|292669794|ref|ZP_06603220.1| flagellar hook protein FlgE [Selenomonas noxia ATCC 43541]
 gi|292648591|gb|EFF66563.1| flagellar hook protein FlgE [Selenomonas noxia ATCC 43541]
          Length = 680

 Score = 96.5 bits (238), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 56/146 (38%), Gaps = 13/146 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++     + R+  + +N++N +T GF+  +V F++++    +          
Sbjct: 1   MMRSMFSGVSGLKGHQTRMDVIGNNIANVNTTGFKASRVTFADMISQNLSGAASPNGNIG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFAL-EGDAWFALESPRGIILTRDGRFK 107
                Q    ++     L    GS   TG   D A+  GD  F ++       TR+G F 
Sbjct: 61  GVNPKQVGLGMSVASTDLIYTNGSVQQTGKNTDIAISRGDGLFVVKRGEQQFYTRNGAFS 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQI 133
              +G+L   S    V    +    +
Sbjct: 121 FDAEGNLTIPSTGLYVQGYMANNGVL 146



 Score = 73.0 bits (177), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 12/88 (13%), Positives = 28/88 (31%), Gaps = 4/88 (4%)

Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTV----KRGFLEDSNANSMYEMG 211
           A + +   +   G  +   +    +             +        LE SN +   +  
Sbjct: 590 AQIAMAQFNNPSGLTKMGGNLYQESNNSGTRTISGASDIGTELTTSALEMSNVDIADQFS 649

Query: 212 QMIHLTQKFNSITTLIDENEKSMLEAIR 239
            MI   + F S + +I  +++ +   I 
Sbjct: 650 DMIITQRGFQSNSKIITVSDEMLETLIN 677


>gi|86150552|ref|ZP_01068776.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|85839004|gb|EAQ56269.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           CF93-6]
          Length = 852

 Score = 96.5 bits (238), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 59/183 (32%), Gaps = 14/183 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G++   A +  +    +N+SN +T GF+  +  F  +                
Sbjct: 1   MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATAPTDGRG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106
            ++  Q    V+          GS  +T    D A+ GD +F +         LTR G F
Sbjct: 61  GSNPLQIGLGVSVSSTTRIHSQGSVQTTDKNTDVAINGDGFFMVSDDGGLTRYLTRSGDF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           K+   G+ V+ +G        +   Q                       +T      +++
Sbjct: 121 KLDAYGNFVNNAGFVVQGWNINWDTQSIDSSRTPQNIFIDPGMHIPAAKSTEVAIKANLN 180

Query: 167 QGF 169
            G 
Sbjct: 181 SGL 183



 Score = 74.1 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 17/144 (11%), Positives = 46/144 (31%), Gaps = 5/144 (3%)

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           T      +    S  + +G+      +        + +          + K   +A + +
Sbjct: 706 TSGSNDGLVSSNSASTLTGQATDGYTSGNLKPDAIRVDDKGNILGEFTNGKTFAVAKIAM 765

Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIH 215
            SV  + G      +          +      T     +K   LE SN +    + ++I 
Sbjct: 766 ASVANNSGLEEIGGNLFKVTANSGAIVVGEAGTGGRGEMKTSALEMSNVDLSRSLTELII 825

Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239
           + + + + +  I  +++ +   I+
Sbjct: 826 IQRGYQANSKTISTSDQMLQTLIQ 849


>gi|284926913|gb|ADC29265.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           IA3902]
          Length = 852

 Score = 96.5 bits (238), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 59/183 (32%), Gaps = 14/183 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G++   A +  +    +N+SN +T GF+  +  F  +                
Sbjct: 1   MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATAPTDGRG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106
            ++  Q    V+          GS  +T    D A+ GD +F +         LTR G F
Sbjct: 61  GSNPLQIGLGVSVSSTTRIHSQGSVQTTDKNTDVAINGDGFFMVSDDGGLTRYLTRSGDF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           K+   G+ V+ +G        +   Q                       +T      +++
Sbjct: 121 KLDAYGNFVNNAGFVVQGWNINWDTQSIDSSRTPQNIFIDPGMHIPAAKSTEVAIKANLN 180

Query: 167 QGF 169
            G 
Sbjct: 181 SGL 183



 Score = 74.1 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 17/144 (11%), Positives = 46/144 (31%), Gaps = 5/144 (3%)

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           T      +    S  + +G+      +        + +          + K   +A + +
Sbjct: 706 TSGSNDGLVSSNSASTLTGQATDGYTSGNLKPDAIRVDDKGNILGEFTNGKTFAVAKIAM 765

Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIH 215
            SV  + G      +          +      T     +K   LE SN +    + ++I 
Sbjct: 766 ASVANNSGLEEIGGNLFKVTANSGAIVVGEAGTGGRGEMKTSALEMSNVDLSRSLTELII 825

Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239
           + + + + +  I  +++ +   I+
Sbjct: 826 IQRGYQANSKTISTSDQMLQTLIQ 849


>gi|253998488|ref|YP_003050551.1| flagellar hook protein FlgE [Methylovorus sp. SIP3-4]
 gi|253985167|gb|ACT50024.1| flagellar basal body FlaE domain protein [Methylovorus sp. SIP3-4]
          Length = 402

 Score = 96.5 bits (238), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 32/123 (26%), Positives = 60/123 (48%), Gaps = 2/123 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ--KISFVAS 61
           SF  GL+   A  + L  + +N++N +TVGF+  + +F++V     N          V  
Sbjct: 2   SFQQGLSGLNAASKSLDVIGNNVANANTVGFKQSRAEFADVYANALNGSGTGSAGIGVKV 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
                    G+  +T   LD A+ G+ +F L +   I  +R+G+F++   G +V++SG++
Sbjct: 62  ADIQRQFTQGNITNTENPLDIAINGNGFFRLSNSGAITYSRNGQFQLDKAGYIVTSSGEH 121

Query: 122 PVL 124
              
Sbjct: 122 LTG 124



 Score = 73.7 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 31/98 (31%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLED 201
             + + K +A + L       G     N+  +              T     ++    ED
Sbjct: 303 YTNGQAKALAQVVLAKFANPNGLAALGNNQFAETSDAGVPVIGKAGTGGLGVLQSSATED 362

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E+  MI   + + +    I   ++ +   + 
Sbjct: 363 SNVDLTAELVNMITAQRYYQANAQTIKTQDQVLQTLVN 400


>gi|229826311|ref|ZP_04452380.1| hypothetical protein GCWU000182_01683 [Abiotrophia defectiva ATCC
           49176]
 gi|229789181|gb|EEP25295.1| hypothetical protein GCWU000182_01683 [Abiotrophia defectiva ATCC
           49176]
          Length = 495

 Score = 96.5 bits (238), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 59/147 (40%), Gaps = 15/147 (10%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK----------- 49
           M  S   G+A     + ++  + +N++N +TVGF++    FS+V                
Sbjct: 1   MMRSLFSGVAGLKVHQTKMDVIGNNIANVNTVGFKSSSTVFSDVFYQTTQTASGPNKESN 60

Query: 50  -NDIDQKISFVASGKEY---LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGR 105
              ++ K   + +          + G   +T   LD  + GD++F  ++      T++G 
Sbjct: 61  VGGVNPKQIGLGANVSSISKNITDPGGSQTTNNALDCMINGDSFFVTKNGGRTYFTKNGA 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQ 132
           FKV  DG+LV++ G             
Sbjct: 121 FKVDTDGTLVNSEGAKVQGWQVDPDDP 147



 Score = 76.8 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 31/93 (33%), Gaps = 6/93 (6%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSG------VTVKRGFLEDSNANS 206
           K++  + + S     G     NS     +     + +          +  G LE SN + 
Sbjct: 400 KLLGQIAVASFKNPSGLEAVGNSNFVETMNSGKFDGVGKDITTDGGKISTGMLEMSNVDL 459

Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             +   MI   + F + +  I   +  + E I 
Sbjct: 460 AAQFTDMITTQRGFQANSRTITTTDSILEELIN 492


>gi|291334312|gb|ADD93973.1| flagellar hook protein [uncultured marine bacterium
           MedDCM-OCT-S09-C247]
          Length = 376

 Score = 96.1 bits (237), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 72/194 (37%), Gaps = 3/194 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SF   L      +  ++T ++N++N  + GF+  + +F ++ G+     +   +  A+  
Sbjct: 2   SFYTALTGLKGAQTDIATTSNNIANVGSSGFKKSRAEFGDIFGSTPLQTNTVGAGTATKS 61

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALE---SPRGIILTRDGRFKVTDDGSLVSASGK 120
                  G+   +   LD A+ G  +F L+   +    + TR+G F V D G +V ++G+
Sbjct: 62  IKQQFSQGNISQSTNTLDMAVSGQGFFTLKGGGNAGQTVFTRNGSFSVNDAGFIVDSNGQ 121

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
           + +         +  K     V  +   S    V        V++         +     
Sbjct: 122 FLLGYPVDNGGAVADKTLEGAVQLQLAASFGDPVATKKINAGVNLPSDAPVVAANVAFDA 181

Query: 181 IPPTPLEDLSGVTV 194
                    S VT+
Sbjct: 182 NDAKTYSASSSVTI 195


>gi|309388826|gb|ADO76706.1| flagellar hook-basal body protein [Halanaerobium praevalens DSM
           2228]
          Length = 548

 Score = 96.1 bits (237), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 35/148 (23%), Positives = 57/148 (38%), Gaps = 12/148 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-------- 52
           M  S   G++   + +Q +    +N+SN +TVGF++ +V F E++               
Sbjct: 1   MLRSMYAGVSGLNSHQQMMDVTGNNISNVNTVGFKSSRVTFKEMLSQTIRGASAPQENRA 60

Query: 53  ----DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                Q    V  G        G+  STG   D A++GD +F L      + +R G F  
Sbjct: 61  GTNPQQVGLGVGVGSIDSDMSSGNLQSTGKTSDVAIQGDGFFVLRDGSTEVYSRAGNFNF 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQK 136
            + G L S+S    V    +        
Sbjct: 121 DEQGRLYSSSTGMLVQGWTANENGEYNN 148



 Score = 79.9 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 48/154 (31%), Gaps = 8/154 (5%)

Query: 90  FALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEIS 149
             L+          G  +   DG   + S        +       +  +I      G   
Sbjct: 396 VELDFSAMTQFADGGSLETNSDGMTANFSSVNGYEAGSLESFSFTETGDIVGSFSNGLTQ 455

Query: 150 QKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP----LEDLSGVTVKRGFLEDSNAN 205
            +GK+     + +     G  R+E    + +                ++    LE SNAN
Sbjct: 456 IQGKI----AMANFANPAGLSRQEGVFEATSNSGEAGIGEPAQGGFGSLAPSTLEMSNAN 511

Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              E   MI   + F + + LI  +++ + E + 
Sbjct: 512 LSQEFTNMITAQRGFQANSKLITTSDEMLQELVN 545


>gi|291280053|ref|YP_003496888.1| flagellar basal-body rod protein [Deferribacter desulfuricans SSM1]
 gi|290754755|dbj|BAI81132.1| flagellar basal-body rod protein [Deferribacter desulfuricans SSM1]
          Length = 205

 Score = 96.1 bits (237), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 52/243 (21%), Positives = 86/243 (35%), Gaps = 39/243 (16%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       L+A  A   R+   A+N++N +T GF+ +          +  +     + V 
Sbjct: 1   MIKGLYNSLSALNAAITRVDNSANNIANINTPGFKRV----------VSYNSALSKNGVN 50

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
                     G  I TG  LD A+ G  +F L + + G + TR G F + + G++VS  G
Sbjct: 51  VYSIKDLDTQGYLIYTGRNLDLAINGKGFFKLTNNQGGEVFTRFGHFSMDEKGNIVSPRG 110

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
           +          I++     I+   E             +G   +  S G    ENS    
Sbjct: 111 EILFSTGREGKIEVSPDGSIYIDKE------------PLGKIELFNSSGNKVPENSY--- 155

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
                         +  G+LE SN +   E+  MI     F +        ++ +   I 
Sbjct: 156 -------------EILPGYLEASNVDLAKEIVDMIVTKNYFEANLKTTKVIDEMLGNIID 202

Query: 240 NIA 242
           N A
Sbjct: 203 NFA 205


>gi|284925346|gb|ADC27698.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni IA3902]
          Length = 544

 Score = 96.1 bits (237), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 42/216 (19%), Positives = 79/216 (36%), Gaps = 9/216 (4%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI----KNDIDQKIS 57
             SF  G++   +    +   A+N++N +T GF+    +F ++          +  Q   
Sbjct: 1   MNSFYNGISGVKSNSFGIDITANNIANVNTTGFKYSDAQFKDIFYTTITTQSTNPAQGGY 60

Query: 58  FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVS 116
              +    +  E GS +++  E D AL+G  +F +    G    TR+G F+   +G LV 
Sbjct: 61  GSGAASSQVVFEQGSPVASDGEFDVALQGKGFFGVLGADGNAYYTRNGSFRRDANGYLVD 120

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           + G + +  M      I   D +  +      +            +   S G    + + 
Sbjct: 121 SYGNFVLGTMNPAFTGINYSDRVAGLMGDYLNTGTPVNNGFTVNSNNSFSIGTTASQGAI 180

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQ 212
             P     P +    V    G L   N N+  E+ +
Sbjct: 181 KVPVNMYLPPQVTQNVK-WSGSL---NTNTTTEVVK 212



 Score = 72.6 bits (176), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 44/124 (35%), Gaps = 7/124 (5%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             D  +                    + K  ++  + LY+    QG V   ++  +    
Sbjct: 418 QQDGVAEGFFEQYNISDDGSIVAQFSNGKNAIVGKLALYNFINEQGLVAMGDNIFAATAN 477

Query: 183 P-------TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
                      + ++    K GFLE SN +   E+  +I   + F++ +  I  +++ + 
Sbjct: 478 SGDASFIMKDGQVVNTAKFKGGFLEQSNVDLSAELSNLIVTQKAFDASSKSITTSDQMIQ 537

Query: 236 EAIR 239
           +AI 
Sbjct: 538 KAIN 541


>gi|313896037|ref|ZP_07829591.1| putative flagellar hook protein FlgE [Selenomonas sp. oral taxon
           137 str. F0430]
 gi|312975462|gb|EFR40923.1| putative flagellar hook protein FlgE [Selenomonas sp. oral taxon
           137 str. F0430]
          Length = 676

 Score = 96.1 bits (237), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 33/148 (22%), Positives = 56/148 (37%), Gaps = 13/148 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++     + R+  + +N++N +T GF+  +V F++++    +          
Sbjct: 1   MMRSMFSGVSGLKGHQTRMDVIGNNIANVNTTGFKASRVTFADMISQNLSGASAPQGTIG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFAL-EGDAWFALESPRGIILTRDGRFK 107
                Q    +A     L    GS  STG   D A+  GD  F +        TR+G F+
Sbjct: 61  GVNPKQIGLGMAVASTDLLYTNGSVQSTGKNTDIAISRGDGLFVVSRGNEKYYTRNGAFE 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQ 135
               G+L   S    V    +    I  
Sbjct: 121 FDAQGNLTIPSTGLYVQGYMANNGVISN 148



 Score = 73.0 bits (177), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 12/88 (13%), Positives = 28/88 (31%), Gaps = 4/88 (4%)

Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKR----GFLEDSNANSMYEMG 211
           A + +   +   G  +   +    +             +        LE SN +   +  
Sbjct: 586 AQIAMAQFNNPSGLTKMGGNLYQESNNSGTRTISGAADIGSELTTSALEMSNVDIADQFS 645

Query: 212 QMIHLTQKFNSITTLIDENEKSMLEAIR 239
            MI   + F S + +I  +++ +   I 
Sbjct: 646 DMIITQRGFQSNSKIITVSDEMLETLIN 673


>gi|315123658|ref|YP_004065662.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|315017380|gb|ADT65473.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 544

 Score = 96.1 bits (237), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 42/216 (19%), Positives = 79/216 (36%), Gaps = 9/216 (4%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI----KNDIDQKIS 57
             SF  G++   +    +   A+N++N +T GF+    +F ++          +  Q   
Sbjct: 1   MNSFYNGISGVKSNSFGIDITANNIANVNTTGFKYSDAQFKDIFYTTITTQSTNPAQGGY 60

Query: 58  FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLVS 116
              +    +  E GS +++  E D AL+G  +F +    G    TR+G F+   +G LV 
Sbjct: 61  GSGAASSQVVFEQGSPVASDGEFDVALQGKGFFGVLGADGNAYYTRNGSFRRDANGYLVD 120

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           + G + +  M      I   D +  +      +            +   S G    + + 
Sbjct: 121 SYGNFVLGTMNPAFTGINYSDRVAGLMGDYLNTGTPVNNGFTVNSNNSFSIGTTASQGAI 180

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQ 212
             P     P +    V    G L   N N+  E+ +
Sbjct: 181 KVPVNMYLPPQVTQNVK-WSGSL---NTNTTTEVVK 212



 Score = 72.2 bits (175), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 7/124 (5%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             D  +                    + K  ++  + LY+    QG     ++  +    
Sbjct: 418 QQDGVAEGFFEQYNISDDGSIVAQFSNGKNAIVGKLALYNFINEQGLAAMGDNIFAATAN 477

Query: 183 P-------TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
                      + ++    K GFLE SN +   E+  +I   + F++ +  I  +++ + 
Sbjct: 478 SGDASFIMKDGQVVNTAKFKGGFLEQSNVDLSAELSNLIVTQKAFDASSKSITTSDQMIQ 537

Query: 236 EAIR 239
           +AI 
Sbjct: 538 KAIN 541


>gi|205355740|ref|ZP_03222510.1| flagellar hook subunit protein [Campylobacter jejuni subsp. jejuni
           CG8421]
 gi|205346517|gb|EDZ33150.1| flagellar hook subunit protein [Campylobacter jejuni subsp. jejuni
           CG8421]
          Length = 852

 Score = 96.1 bits (237), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 59/183 (32%), Gaps = 14/183 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G++   A +  +    +N+SN +T GF+  +  F  +                
Sbjct: 1   MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATAPTDGRG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106
            ++  Q    V+          GS  +T    D A+ GD +F +         LTR G F
Sbjct: 61  GSNPLQIGLGVSVSSTTRIHSQGSVQTTDKNTDVAINGDGFFMVSDDGGLTRYLTRSGDF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           K+   G+ V+ +G        +   Q                       +T      +++
Sbjct: 121 KLDAYGNFVNNAGFVVQGWNINWDTQSIDSSRTPQNIFIDPGMHIPAAKSTEVAIKANLN 180

Query: 167 QGF 169
            G 
Sbjct: 181 SGL 183



 Score = 74.1 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 18/144 (12%), Positives = 46/144 (31%), Gaps = 5/144 (3%)

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           T      +    S  + +G+      +        + +          + K   +A M +
Sbjct: 706 TSGSNDGLVSSNSASTLTGQATDGYTSGNLKPDAIRVDDKGNILGEFTNGKTFAVAKMAM 765

Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIH 215
            SV  + G      +          +      T     +K   LE SN +    + ++I 
Sbjct: 766 ASVANNSGLEEIGGNLFKVTANSGAIVVGEAGTGGRGEMKTSALEMSNVDLSRSLTELII 825

Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239
           + + + + +  I  +++ +   I+
Sbjct: 826 IQRGYQANSKTISTSDQMLQTLIQ 849


>gi|152975165|ref|YP_001374682.1| flagellar hook protein FlgE [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|152023917|gb|ABS21687.1| protein of unknown function DUF1078 domain protein [Bacillus
           cytotoxicus NVH 391-98]
          Length = 467

 Score = 96.1 bits (237), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 54/135 (40%), Gaps = 13/135 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49
           M  S    ++   A++  LS  ++N++N  TVG++  K  F +++               
Sbjct: 1   MIKSLYTSISGMSAMQNALSVTSNNIANAQTVGYKKQKAVFDDLLYNNTVGAKGDDTKAG 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107
            +     + V           GS   TG     A+EG+ +F        G+  TR G F 
Sbjct: 61  TNPKSIGNGVKFSGTSTDYNGGSITMTGINGQVAIEGNGFFVVGDSQGNGVQYTRKGTFG 120

Query: 108 VTDDGSLVSASGKYP 122
            +++  +V+  G+Y 
Sbjct: 121 KSENNYIVNGEGQYV 135



 Score = 74.5 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 14/128 (10%), Positives = 38/128 (29%), Gaps = 5/128 (3%)

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
            +  ++  +  + +  K                + ++ + + +     G ++  N    P
Sbjct: 340 DHKDVNGRAAAVAMDYKISDNGYVMVTYSDNSTRAVSQLAVATFKNQDGLMKVGNGNYVP 399

Query: 180 NIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
                       E      +  G  E SN +   E   ++   + F     +I  ++  +
Sbjct: 400 TASAGDPFIGVAEQNGAGKIIGGAQEGSNVDLSVEFVDLMLYQRGFQGNAKVIKVSDDVL 459

Query: 235 LEAIRNIA 242
            E +  I 
Sbjct: 460 NEVVNLIR 467


>gi|315057484|gb|ADT71813.1| Flagellar hook protein flgE [Campylobacter jejuni subsp. jejuni S3]
 gi|315926889|gb|EFV06255.1| flagella basal body rod family protein [Campylobacter jejuni subsp.
           jejuni DFVF1099]
 gi|315926904|gb|EFV06270.1| flagella basal body rod family protein [Campylobacter jejuni subsp.
           jejuni DFVF1099]
          Length = 544

 Score = 96.1 bits (237), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 42/216 (19%), Positives = 79/216 (36%), Gaps = 9/216 (4%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI----KNDIDQKIS 57
             SF  G++   +    +   A+N++N +T GF+    +F ++          +  Q   
Sbjct: 1   MNSFYNGISGVKSNSFGIDITANNIANVNTTGFKYSDAQFKDIFYTTITTQSTNPAQGGY 60

Query: 58  FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLVS 116
              +    +  E GS +++  E D AL+G  +F +    G    TR+G F+   +G LV 
Sbjct: 61  GSGAASSQVVFEQGSPVASDGEFDVALQGKGFFGVLGADGNAYYTRNGSFRRDANGYLVD 120

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           + G + +  M      I   D +  +      +            +   S G    + + 
Sbjct: 121 SYGNFVLGTMNPAFTGINYSDRVAGLMGDYLNTGTPVNNGFTVNSNNSFSIGTTASQGAI 180

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQ 212
             P     P +    V    G L   N N+  E+ +
Sbjct: 181 KVPVNMYLPPQVTQNVK-WSGSL---NTNTTTEVVK 212



 Score = 72.6 bits (176), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 44/124 (35%), Gaps = 7/124 (5%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             D  +                    + K  ++  + LY+    QG V   ++  +    
Sbjct: 418 QQDGVAEGFFEQYNISDDGSIVAQFSNGKNAIVGKLALYNFINEQGLVAMGDNIFAATAN 477

Query: 183 P-------TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
                      + ++    K GFLE SN +   E+  +I   + F++ +  I  +++ + 
Sbjct: 478 SGDASFIMKDGQVVNTAKFKGGFLEQSNVDLSAELSNLIVTQKAFDASSKSITTSDQMIQ 537

Query: 236 EAIR 239
           +AI 
Sbjct: 538 KAIN 541


>gi|114330361|ref|YP_746583.1| flagellar hook protein FlgE [Nitrosomonas eutropha C91]
 gi|114307375|gb|ABI58618.1| flagellar basal body FlaE domain protein [Nitrosomonas eutropha
           C91]
          Length = 419

 Score = 96.1 bits (237), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 36/153 (23%), Positives = 62/153 (40%), Gaps = 1/153 (0%)

Query: 8   GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-DQKISFVASGKEYL 66
           GL+   A   +L    +N++N +TVGF+  + +FS+V         +Q            
Sbjct: 6   GLSGLKAASAKLDVTGNNIANANTVGFKQSQAQFSDVFANSLGGGKNQIGIGTQVAAIAQ 65

Query: 67  SKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDM 126
               G+  S+   LD A+ G+ +F   +   I  TR+G+F +  DG LV+A+        
Sbjct: 66  EFAQGNVTSSDNPLDVAITGNGFFRTNNNGTISYTRNGQFHLDKDGFLVNANSYNVTGFA 125

Query: 127 ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG 159
           A    QI     +       +++ K       G
Sbjct: 126 ADASGQIIPNIPVNLRLPTSDLTPKPTANFATG 158



 Score = 74.9 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 12/125 (9%), Positives = 32/125 (25%), Gaps = 5/125 (4%)

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                D  +                    +   + +  + L       G     N+  + 
Sbjct: 294 NMMNQDGFTSGRLAGYSISDNGEIRGSYTNGVTRTLGQLALAGFSNPNGLKPMGNNQWAE 353

Query: 180 NIPPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
                       E     +++   +E+SN +   E+  +I   + + +    I   +  M
Sbjct: 354 TAESGLPLIGTPETGVLGSLQSSAVEESNVDLTSELVSLIMTQRVYQANAKTIQTQDAVM 413

Query: 235 LEAIR 239
              + 
Sbjct: 414 QSIMN 418


>gi|196039147|ref|ZP_03106454.1| putative flagellar basal-body rod protein [Bacillus cereus
           NVH0597-99]
 gi|196030292|gb|EDX68892.1| putative flagellar basal-body rod protein [Bacillus cereus
           NVH0597-99]
          Length = 249

 Score = 96.1 bits (237), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 84/246 (34%), Gaps = 15/246 (6%)

Query: 11  AQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DIDQKISFVASG 62
             +   QR++  ++N++N  T GF+   +        +          +I      V   
Sbjct: 2   GMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIGSVDYAVVPA 61

Query: 63  KEYLSKEVGSFISTGTELDFALEGDA-----WFALESPRGIILTRDGRFKVTDDGSLVSA 117
             +++   G+   T ++ DF L+        +F         LTRDG F +  D  L + 
Sbjct: 62  ATHVNLVQGNIQMTNSDTDFLLDDGTAGTASFFVTSKNNETFLTRDGSFTLNSDRYLQTT 121

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM--SQGFVRRENS 175
           SG + + +                       +     IA +   +V    +   ++REN 
Sbjct: 122 SGAFVMGENNERIRIPEGAKVAVQADGTLYDAVTQNNIARLQTKTVGAEVNNRLIQRENK 181

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
             +              TVK   LE+SN +   EM  ++   +  ++   ++   +K   
Sbjct: 182 SFTLAEGNIADLPNGVGTVKNYMLENSNVDMTKEMADLMTDQRMISASQRVMTSFDKIYE 241

Query: 236 EAIRNI 241
           +    I
Sbjct: 242 KEANEI 247


>gi|88597739|ref|ZP_01100972.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|88190043|gb|EAQ94019.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           84-25]
          Length = 865

 Score = 96.1 bits (237), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 59/183 (32%), Gaps = 14/183 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G++   A +  +    +N+SN +T GF+  +  F  +                
Sbjct: 1   MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATAPTDGRG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106
            ++  Q    V+          GS  +T    D A+ GD +F +         LTR G F
Sbjct: 61  GSNPLQIGLGVSVSSTTRIHSQGSVQTTDKNTDVAINGDGFFMVSDDGGLTNYLTRSGDF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           K+   G+ V+ +G        +   Q                       +T      +++
Sbjct: 121 KLDAYGNFVNNAGFVVQGWNINWDDQTIDSSRTPQNIFIDPGMHIPAAKSTEVAIKANLN 180

Query: 167 QGF 169
            G 
Sbjct: 181 SGL 183



 Score = 73.0 bits (177), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 17/144 (11%), Positives = 46/144 (31%), Gaps = 5/144 (3%)

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           T      +    S  + +G+      +        + +          + K   +A + +
Sbjct: 719 TSGSNDGLVSSNSASTLTGQATDGYTSGNLKPDAIRVDDKGNILGEFTNGKTFAVAKIAM 778

Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIH 215
            SV  + G      +          +      T     +K   LE SN +    + ++I 
Sbjct: 779 ASVANNSGLEEIGGNLFKVTANSGNIVVGEAGTGGRGEMKTSALEMSNVDLSRSLTELII 838

Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239
           + + + + +  I  +++ +   I+
Sbjct: 839 IQRGYQANSKTISTSDQMLQTLIQ 862


>gi|237753142|ref|ZP_04583622.1| flagellar hook protein FlgE [Helicobacter winghamensis ATCC
           BAA-430]
 gi|229375409|gb|EEO25500.1| flagellar hook protein FlgE [Helicobacter winghamensis ATCC
           BAA-430]
          Length = 758

 Score = 95.7 bits (236), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 34/141 (24%), Positives = 53/141 (37%), Gaps = 14/141 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++   A +  L   ++N++N +T GF+  +  FS +V   K           
Sbjct: 1   MLRSLWSGVSGMQAHQIALDVESNNIANVNTTGFKYSRADFSTMVSQTKRSATIPYAGYG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106
                               E GS  +T  + D ALEG   F + +      + TRDG F
Sbjct: 61  GVNDFSVGLGTGIETTTKIFEQGSLQNTDRKGDLALEGKGMFVVSNNGGYSNMYTRDGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMA 127
                G+LV+ SG      + 
Sbjct: 121 MFDAVGNLVNTSGFIVQGWVR 141



 Score = 64.5 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 14/127 (11%), Positives = 42/127 (33%), Gaps = 5/127 (3%)

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           +  +    D  +  +      +          + +   +A + + +    +G     ++ 
Sbjct: 628 SQAQNVNGDGYASGVLKEYYFDATGTLIGSFDNGQNLALAQVAIATFANYEGLQESGSNL 687

Query: 177 ISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
            + +         +  T     V    LE SNA+    + Q+I + + F + +  I   +
Sbjct: 688 FAESANSGRATIGTAGTGGRASVAASKLEMSNADLSRGLTQLIVVQRGFQANSKSITTAD 747

Query: 232 KSMLEAI 238
           + +   +
Sbjct: 748 QVLNTLL 754


>gi|86154000|ref|ZP_01072202.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|85842538|gb|EAQ59751.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           HB93-13]
          Length = 845

 Score = 95.7 bits (236), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 59/183 (32%), Gaps = 14/183 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G++   A +  +    +N+SN +T GF+  +  F  +                
Sbjct: 1   MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATAPTDGRG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106
            ++  Q    V+          GS  +T    D A+ GD +F +         LTR G F
Sbjct: 61  GSNPLQIGLGVSVSSTTRIHSQGSVQTTDKNTDVAINGDGFFMVSDDGGLTNYLTRSGDF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           K+   G+ V+ +G        +   Q                       +T      +++
Sbjct: 121 KLDAYGNFVNNAGFVVQGWNINWDDQTIDSSRSPQNIFIDPGMHIPAAKSTEVAIKANLN 180

Query: 167 QGF 169
            G 
Sbjct: 181 SGL 183



 Score = 73.0 bits (177), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 17/144 (11%), Positives = 46/144 (31%), Gaps = 5/144 (3%)

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           T      +    S  + +G+      +        + +          + K   +A + +
Sbjct: 699 TSGSNDGLVSSNSASTLTGQATDGYTSGNLKPDAIRVDDKGNILGEFTNGKTFAVAKIAM 758

Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIH 215
            SV  + G      +          +      T     +K   LE SN +    + ++I 
Sbjct: 759 ASVANNSGLEEIGGNLFKVTANSGNIVVGEAGTGGRGEMKTSALEMSNVDLSRSLTELII 818

Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239
           + + + + +  I  +++ +   I+
Sbjct: 819 IQRGYQANSKTISTSDQMLQTLIQ 842


>gi|304438415|ref|ZP_07398355.1| flagellar hook protein FlgE [Selenomonas sp. oral taxon 149 str.
           67H29BP]
 gi|304368498|gb|EFM22183.1| flagellar hook protein FlgE [Selenomonas sp. oral taxon 149 str.
           67H29BP]
          Length = 678

 Score = 95.7 bits (236), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 55/147 (37%), Gaps = 13/147 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S    ++     + R+  V +N++N +T GF+  +V F++++    +          
Sbjct: 1   MIRSMFSAVSGLKGHQTRMDVVGNNIANVNTTGFKASRVTFADMISQNLSGASSPTGTIG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFAL-EGDAWFALESPRGIILTRDGRFK 107
                Q    ++     L    GS   TG   D A+  GD  F +   +    TR+G F 
Sbjct: 61  GVNPKQIGLGMSVASTDLLYTNGSVQQTGKNTDVAISRGDGLFVVSKGQQKFYTRNGAFS 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIP 134
              +G+L   S    V    +    + 
Sbjct: 121 FDAEGNLTIPSTGLYVQGYMANNGVLN 147



 Score = 74.5 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 12/88 (13%), Positives = 28/88 (31%), Gaps = 4/88 (4%)

Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTV----KRGFLEDSNANSMYEMG 211
           A + +   +   G  +   +    +             +        LE SN +   +  
Sbjct: 588 AQIAMAQFNNPSGLTKMGGNLYQESNNSGTRTISGASDIGTELTTSALEMSNVDLADQFS 647

Query: 212 QMIHLTQKFNSITTLIDENEKSMLEAIR 239
            MI   + F S + +I  +++ +   I 
Sbjct: 648 DMIITQRGFQSNSKMITVSDEMLETLIN 675


>gi|218563315|ref|YP_002345095.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           NCTC 11168]
 gi|112361022|emb|CAL35823.1| flagellar hook subunit protein [Campylobacter jejuni subsp. jejuni
           NCTC 11168]
          Length = 865

 Score = 95.7 bits (236), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 59/183 (32%), Gaps = 14/183 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G++   A +  +    +N+SN +T GF+  +  F  +                
Sbjct: 1   MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATAPTDGRG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106
            ++  Q    V+          GS  +T    D A+ GD +F +         LTR G F
Sbjct: 61  GSNPLQIGLGVSVSSTTRIHSQGSVQTTDKNTDVAINGDGFFMVSDDGGLTNYLTRSGDF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           K+   G+ V+ +G        +   Q                       +T      +++
Sbjct: 121 KLDAYGNFVNNAGFVVQGWNINWDDQTIDSSRTPQNIFIDPGMHIPAAKSTEVAIKANLN 180

Query: 167 QGF 169
            G 
Sbjct: 181 SGL 183



 Score = 73.0 bits (177), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 17/144 (11%), Positives = 46/144 (31%), Gaps = 5/144 (3%)

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           T      +    S  + +G+      +        + +          + K   +A + +
Sbjct: 719 TSGSNDGLVSSNSASTLTGQATDGYTSGNLKPDAIRVDDKGNILGEFTNGKTFAVAKIAM 778

Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIH 215
            SV  + G      +          +      T     +K   LE SN +    + ++I 
Sbjct: 779 ASVANNSGLEEIGGNLFKVTANSGNIVVGEAGTGGRGEMKTSALEMSNVDLSRSLTELII 838

Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239
           + + + + +  I  +++ +   I+
Sbjct: 839 IQRGYQANSKTISTSDQMLQTLIQ 862


>gi|148926818|ref|ZP_01810497.1| flagellar hook subunit protein [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|145844543|gb|EDK21650.1| flagellar hook subunit protein [Campylobacter jejuni subsp. jejuni
           CG8486]
          Length = 865

 Score = 95.7 bits (236), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 59/183 (32%), Gaps = 14/183 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G++   A +  +    +N+SN +T GF+  +  F  +                
Sbjct: 1   MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATAPTDGRG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106
            ++  Q    V+          GS  +T    D A+ GD +F +         LTR G F
Sbjct: 61  GSNPLQIGLGVSVSSTTRIHSQGSVQTTDKNTDVAINGDGFFMVSDDGGLTNYLTRSGDF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           K+   G+ V+ +G        +   Q                       +T      +++
Sbjct: 121 KLDAYGNFVNNAGFVVQGWNINWDDQTIDSSRTPQNIFIDPGMHIPAAKSTEVAIKANLN 180

Query: 167 QGF 169
            G 
Sbjct: 181 SGL 183



 Score = 73.0 bits (177), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 17/144 (11%), Positives = 46/144 (31%), Gaps = 5/144 (3%)

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           T      +    S  + +G+      +        + +          + K   +A + +
Sbjct: 719 TSGSNDGLVSSNSASTLTGQATDGYTSGNLKPDAIRVDDKGNILGEFTNGKTFAVAKIAM 778

Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIH 215
            SV  + G      +          +      T     +K   LE SN +    + ++I 
Sbjct: 779 ASVANNSGLEEIGGNLFKVTANSGNIVVGEAGTGGRGEMKTSALEMSNVDLSRSLTELII 838

Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239
           + + + + +  I  +++ +   I+
Sbjct: 839 IQRGYQANSKTISTSDQMLQTLIQ 862


>gi|307748585|gb|ADN91855.1| Flagellar hook protein [Campylobacter jejuni subsp. jejuni M1]
          Length = 690

 Score = 95.7 bits (236), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 59/183 (32%), Gaps = 14/183 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G++   A +  +    +N+SN +T GF+  +  F  +                
Sbjct: 1   MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATAPTDGRG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106
            ++  Q    V+          GS  +T    D A+ GD +F +         LTR G F
Sbjct: 61  GSNPLQIGLGVSVSSTTRIHSQGSVQTTDKNTDVAINGDGFFMVSDDGGLTNYLTRSGDF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           K+   G+ V+ +G        +   Q                       +T      +++
Sbjct: 121 KLDAYGNFVNNAGFVVQGWNINWDDQTIDSSRTPQNIFIDPGMHIPAAKSTEVAIKANLN 180

Query: 167 QGF 169
            G 
Sbjct: 181 SGL 183


>gi|78485812|ref|YP_391737.1| hypothetical protein Tcr_1471 [Thiomicrospira crunogena XCL-2]
 gi|78364098|gb|ABB42063.1| Flagellar hook protein FlgE [Thiomicrospira crunogena XCL-2]
          Length = 538

 Score = 95.7 bits (236), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 72/202 (35%), Gaps = 9/202 (4%)

Query: 7   IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66
             ++   A  Q L  +++N++N  T+G+++ + +FS++    ++      + V       
Sbjct: 8   TAVSGLNAASQGLGVISNNLANAQTMGYKSSRAEFSDMFYGAQS---TPGNGVRVDSITQ 64

Query: 67  SKEVGSFISTGTELDFALEGDAWF---ALESPRGIILTRDGRFKVTDDGSLVSASGKYPV 123
               G+   TG +LD A++GD +F           + TR+G FK+  DG + S  G    
Sbjct: 65  DFTNGTITDTGRDLDMAIDGDGFFILEDRTGKYENVYTRNGSFKLDKDGYVTSQEGNKVQ 124

Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-MSQGFVRRENSGISPNIP 182
             + +  +   +           ++ +  K   +    + D    G            I 
Sbjct: 125 GYLLNPALSTERNPVFETTLSSIDLDELNKTPKSTDEMNYDINVDGEENNNVDATQTPIA 184

Query: 183 PTPLEDLSGVTVKRGFLEDSNA 204
                      +    L  SN 
Sbjct: 185 GIENSVGGDTALAGSAL--SNI 204



 Score = 68.7 bits (166), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 18/198 (9%), Positives = 57/198 (28%), Gaps = 10/198 (5%)

Query: 52  IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDD 111
                +           +  ++  TG + +     D+     +             +  D
Sbjct: 340 TGANSTPTGQDTANNPLDPATWTPTGNQPNMEWVVDSPITGANDPLGNPADALGVSIDVD 399

Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-----EISQKGKVIATMGLYSVDMS 166
            + ++       L   +              G+ G       + +   +A +G+ + +  
Sbjct: 400 FTKMTQFAGSYNLRGVTQNGYAIGDLVGVYTGKDGVIEARYSNGRSVPVAQLGMANFNDK 459

Query: 167 QGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221
               +      + +     ++          ++  G LE SN ++  E+  MI   + + 
Sbjct: 460 NALEKLGGQSYAESFASGAVQIGTSERNGYGSINAGALEYSNVDTAGELVHMIQTQRTYQ 519

Query: 222 SITTLIDENEKSMLEAIR 239
           +   +I  ++      ++
Sbjct: 520 ASAQVIQTSQTLTQTILQ 537


>gi|298345998|ref|YP_003718685.1| flagellar basal body and hook protein [Mobiluncus curtisii ATCC
           43063]
 gi|304390244|ref|ZP_07372198.1| flagellar hook protein FlgE [Mobiluncus curtisii subsp. curtisii
           ATCC 35241]
 gi|298236059|gb|ADI67191.1| flagellar basal body and hook protein [Mobiluncus curtisii ATCC
           43063]
 gi|304326726|gb|EFL93970.1| flagellar hook protein FlgE [Mobiluncus curtisii subsp. curtisii
           ATCC 35241]
          Length = 484

 Score = 95.7 bits (236), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 62/169 (36%), Gaps = 14/169 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50
           M  S   G++     +  L   ++N++N +T GF++   +F +    +            
Sbjct: 1   MLRSLFTGISGLSVHQTMLDVTSNNIANVNTTGFKSASTRFEDTFSQLVRSGAAPRLNER 60

Query: 51  ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRF 106
              +  Q    V       +   G+   TG  LD  + GD ++   ++    + TR+G F
Sbjct: 61  GGMNPAQVGLGVKLQSITQNFTGGAAQMTGRNLDTMINGDGFYVLRKTNGSSVYTRNGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI 155
            +   G +V+A G +    M      I       N+      + +G+  
Sbjct: 121 GLDAQGQVVAADGSFVQGWMGDKDGTINASGTPGNITLPLTKTVEGRPT 169



 Score = 80.7 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 18/135 (13%), Positives = 44/135 (32%), Gaps = 10/135 (7%)

Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-----EISQKGKVIATMGLYSVDMSQGF 169
           ++  G         V   +      ++V   G       +   + +A + + S     G 
Sbjct: 347 LTGFGGVNNFGQKQVDGNMAGYMTGYSVEADGTIRGTFSNGDNRALARIAVASFANPLGL 406

Query: 170 VRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224
            +  +S           +     T     +  G +E SN +   E   +I   + F + +
Sbjct: 407 EKAGSSYFVETGNSGQPQIGEAGTGQRGAMTGGAIEMSNVDLAAEFTNLILSQRGFQANS 466

Query: 225 TLIDENEKSMLEAIR 239
            +I  +++ + E + 
Sbjct: 467 RVITTSDEILQELVN 481


>gi|165869539|ref|ZP_02214198.1| putative flagellar basal-body rod protein [Bacillus anthracis str.
           A0488]
 gi|190566290|ref|ZP_03019208.1| putative flagellar basal-body rod protein [Bacillus anthracis
           Tsiankovskii-I]
 gi|218902886|ref|YP_002450720.1| putative flagellar basal-body rod protein [Bacillus cereus AH820]
 gi|227815455|ref|YP_002815464.1| putative flagellar basal-body rod protein [Bacillus anthracis str.
           CDC 684]
 gi|164714979|gb|EDR20497.1| putative flagellar basal-body rod protein [Bacillus anthracis str.
           A0488]
 gi|190562425|gb|EDV16392.1| putative flagellar basal-body rod protein [Bacillus anthracis
           Tsiankovskii-I]
 gi|218539299|gb|ACK91697.1| putative flagellar basal-body rod protein [Bacillus cereus AH820]
 gi|227003269|gb|ACP13012.1| putative flagellar basal-body rod protein [Bacillus anthracis str.
           CDC 684]
          Length = 249

 Score = 95.7 bits (236), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 85/246 (34%), Gaps = 15/246 (6%)

Query: 11  AQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DIDQKISFVASG 62
             +   QR++  ++N++N  T GF+   +        +          +I      V   
Sbjct: 2   GMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIGSVDYAVVPA 61

Query: 63  KEYLSKEVGSFISTGTELDFALEGDA-----WFALESPRGIILTRDGRFKVTDDGSLVSA 117
             +++   G+   T ++ DF L+        +F         LTRDG F +  D  L + 
Sbjct: 62  ATHVNLVQGNIQMTNSDTDFLLDDGTAGTASFFVTSKNNETFLTRDGSFTLNSDRYLQTT 121

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV--DMSQGFVRRENS 175
           SG + + +                       +     IA +   +V  + +   ++REN 
Sbjct: 122 SGAFVMGENNERIRIPEGAKVAVQADGTLYDAVTQNNIARLQTKTVGAEANNRLIQRENK 181

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
             +              TVK   LE+SN +   EM  ++   +  ++   ++   +K   
Sbjct: 182 SFTLAEGNIADLPNGVGTVKNYMLENSNVDMTKEMADLMTDQRMISASQRVMTSFDKIYE 241

Query: 236 EAIRNI 241
           +    I
Sbjct: 242 KEANEI 247


>gi|157415947|ref|YP_001483203.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           81116]
 gi|157386911|gb|ABV53226.1| hypothetical protein C8J_1629 [Campylobacter jejuni subsp. jejuni
           81116]
          Length = 852

 Score = 95.7 bits (236), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 59/183 (32%), Gaps = 14/183 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G++   A +  +    +N+SN +T GF+  +  F  +                
Sbjct: 1   MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATAPTDGRG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106
            ++  Q    V+          GS  +T    D A+ GD +F +         LTR G F
Sbjct: 61  GSNPLQIGLGVSVSSTTRIHSQGSVQTTDKNTDVAINGDGFFMVSDDGGLTNYLTRSGDF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           K+   G+ V+ +G        +   Q                       +T      +++
Sbjct: 121 KLDAYGNFVNNAGFVVQGWNINWDDQTIDSSRTPQNIFIDPGMHIPAAKSTEVAIKANLN 180

Query: 167 QGF 169
            G 
Sbjct: 181 SGL 183



 Score = 72.6 bits (176), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 17/144 (11%), Positives = 46/144 (31%), Gaps = 5/144 (3%)

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           T      +    S  + +G+      +        + +          + K   +A + +
Sbjct: 706 TSGSNDGLVSSNSASTLTGQATDGYTSGNLKPDAIRVDDKGNILGEFTNGKTFAVAKIAM 765

Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIH 215
            SV  + G      +          +      T     +K   LE SN +    + ++I 
Sbjct: 766 ASVANNSGLEEIGGNLFKVTANSGNIVVGEAGTGGRGEMKTSALEMSNVDLSRSLTELII 825

Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239
           + + + + +  I  +++ +   I+
Sbjct: 826 IQRGYQANSKTISTSDQMLQTLIQ 849


>gi|2316082|gb|AAC45551.1| hook protein [Campylobacter coli]
          Length = 851

 Score = 95.7 bits (236), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 59/183 (32%), Gaps = 14/183 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G++   A +  +    +N+SN +T GF+  +  F  +                
Sbjct: 1   MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATAPTDGRG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106
            ++  Q    V+          GS  +T    D A+ GD +F +         LTR G F
Sbjct: 61  GSNPLQIGLGVSVSSTTRIHSQGSVQTTDKNTDVAINGDGFFMVSDDGGLTRYLTRSGDF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           K+   G+ V+ +G        +   Q                       +T      +++
Sbjct: 121 KLDAYGNFVNNAGFVVQGWNINWDDQTIDSSRTPQNIFIDPGMHIPAAKSTEVAIKANLN 180

Query: 167 QGF 169
            G 
Sbjct: 181 SGL 183



 Score = 71.8 bits (174), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 17/144 (11%), Positives = 45/144 (31%), Gaps = 5/144 (3%)

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           T      +    S  +   K  +   +        + +          + K   +A + +
Sbjct: 705 TSGSNDGLVSSNSASTQQDKQLMGYTSGNLKPDAIRVDDKGNILGEFTNGKTFAVAKIAM 764

Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIH 215
            SV  + G      +          +      T     +K   LE SN +    + ++I 
Sbjct: 765 ASVANNSGLEEIGGNLFKVTANSGNIVVGEAGTGGRGEMKTAALEMSNVDLSRSLTELII 824

Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239
           + + + + +  I  +++ +   I+
Sbjct: 825 IQRGYQANSKTISTSDQMLQTLIQ 848


>gi|222823151|ref|YP_002574724.1| flagellar hook protein FlgE [Campylobacter lari RM2100]
 gi|222538372|gb|ACM63473.1| flagellar hook protein FlgE [Campylobacter lari RM2100]
          Length = 814

 Score = 95.7 bits (236), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 59/205 (28%), Gaps = 14/205 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G++   A +  +    +N++N +T GF+  +  FS ++               
Sbjct: 1   MMRSLWAGVSGLQAHQYAMDVEGNNIANVNTFGFKYSRADFSTLMSQTSKIATAPDGNLG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106
             +  Q                G+  +T    D A+ GD +F + +        TR G F
Sbjct: 61  GKNPMQVGLGAGVNSTTRIHSQGNIQTTDKNTDMAINGDGFFIVSNDGGTTQFFTRAGDF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           K    G+ V  +G        +         +                 ++    + ++ 
Sbjct: 121 KTDAVGNFVDNNGYTVQGWNYNQETGQIDSSKSVTDIVIPPGMSMPARPSSSVSLTANLD 180

Query: 167 QGFVRRENSGISPNIPPTPLEDLSG 191
            G     N+     I          
Sbjct: 181 SGNTLGTNASAKRPIYALDSLHGGR 205



 Score = 63.7 bits (153), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 10/90 (11%), Positives = 33/90 (36%), Gaps = 5/90 (5%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLEDSNANSMYE 209
           +A + L +   + G     N+                 +     +K   +E SN +    
Sbjct: 722 LAKVALATFPNNMGLEEMGNNLYKATANSGTATIGHAGEGGRGGLKGSAIEMSNVDLSRA 781

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           + ++I + + + + +  I  +++ +   ++
Sbjct: 782 LTELIVIQRGYQANSKTITTSDQLLNTLLQ 811


>gi|30248322|ref|NP_840392.1| flagellar hook protein FlgE [Nitrosomonas europaea ATCC 19718]
 gi|30138208|emb|CAD84216.1| Flagella basal body rod protein [Nitrosomonas europaea ATCC 19718]
          Length = 410

 Score = 95.7 bits (236), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 65/155 (41%), Gaps = 1/155 (0%)

Query: 8   GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG-AIKNDIDQKISFVASGKEYL 66
           GL+   A   +L    +N++N +TVGF+  + +F++V   A+    +Q            
Sbjct: 6   GLSGLKAASAKLDVTGNNIANANTVGFKQSQAQFADVYANALGGGRNQIGIGTQLAAVAQ 65

Query: 67  SKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDM 126
               G+   T   LD A+ G+ +F +++   I  TR+G+F +  DG LV+AS        
Sbjct: 66  EFNQGNVTPTNNPLDVAITGNGFFRMDNNGSISFTRNGQFHLDKDGFLVNASNYNVTGFG 125

Query: 127 ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLY 161
           A    QI     +       +++         G+ 
Sbjct: 126 ADASGQIIPNIPVNLRLPTADMTPNPTTSFMTGVN 160



 Score = 71.4 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 11/125 (8%), Positives = 32/125 (25%), Gaps = 5/125 (4%)

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                D  +                    +   + +  + L       G     ++    
Sbjct: 285 NVMSQDGFASGRLAGYSISDDGQIRASYSNNVTRTVGQLVLAGFSNPNGLKPLGSNQWGE 344

Query: 180 NIPPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
                       E     +++   +E+SN +   E+  +I   + + +    I+  +  M
Sbjct: 345 TAESGLPLVGTPETGVLGSLQSSAVEESNVDLTTELVTLIMTQRVYQANAKTIETQDAVM 404

Query: 235 LEAIR 239
              + 
Sbjct: 405 QTIMN 409


>gi|121613214|ref|YP_001001371.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|167006263|ref|ZP_02272021.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|30721660|gb|AAP34261.1| FlgE [Campylobacter jejuni subsp. jejuni 81-176]
 gi|87248993|gb|EAQ71955.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           81-176]
          Length = 838

 Score = 95.7 bits (236), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 59/183 (32%), Gaps = 14/183 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G++   A +  +    +N+SN +T GF+  +  F  +                
Sbjct: 1   MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATAPTDGRG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106
            ++  Q    V+          GS  +T    D A+ GD +F +         LTR G F
Sbjct: 61  GSNPLQIGLGVSVSSTTRIHSQGSVQTTDKNTDVAINGDGFFMVSDDGGLTRYLTRSGDF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           K+   G+ V+ +G        +   Q                       +T      +++
Sbjct: 121 KLDAYGNFVNNAGFVVQGWNINWDTQSIDSSRTPQNIFIDPGMHIPAAKSTEVAIKANLN 180

Query: 167 QGF 169
            G 
Sbjct: 181 SGL 183



 Score = 74.1 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 18/144 (12%), Positives = 46/144 (31%), Gaps = 5/144 (3%)

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           T      +    S  + +G+      +        + +          + K   +A M +
Sbjct: 692 TSGSNDGLVSSNSASTLTGQATDGYTSGNLKPDAIRVDDKGNILGEFTNGKTFAVAKMAM 751

Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIH 215
            SV  + G      +          +      T     +K   LE SN +    + ++I 
Sbjct: 752 ASVANNSGLEEIGGNLFKVTANSGAIVVGEAGTGGRGEMKTSALEMSNVDLSRSLTELII 811

Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239
           + + + + +  I  +++ +   I+
Sbjct: 812 IQRGYQANSKTISTSDQMLQTLIQ 835


>gi|305432574|ref|ZP_07401735.1| flagellar hook protein FlgE [Campylobacter coli JV20]
 gi|304444285|gb|EFM36937.1| flagellar hook protein FlgE [Campylobacter coli JV20]
          Length = 847

 Score = 95.7 bits (236), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 59/183 (32%), Gaps = 14/183 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G++   A +  +    +N+SN +T GF+  +  F  +                
Sbjct: 1   MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATAPTDGRG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106
            ++  Q    V+          GS  +T    D A+ GD +F +         LTR G F
Sbjct: 61  GSNPLQIGLGVSVSSTTRIHSQGSVQTTDKNTDVAINGDGFFMVSDDGGLTRYLTRSGDF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           K+   G+ V+ +G        +   Q                       +T      +++
Sbjct: 121 KLDAYGNFVNNAGFVVQGWNINWDDQTIDSSRSPQNIFIDPGMHIPAAKSTEVAIKANLN 180

Query: 167 QGF 169
            G 
Sbjct: 181 SGL 183



 Score = 73.0 bits (177), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 17/144 (11%), Positives = 46/144 (31%), Gaps = 5/144 (3%)

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           T      +    S  + +G+      +        + +          + K   +A + +
Sbjct: 701 TSGSNDGLVSSNSASTLTGQATDGYTSGNLKPDAIRVDDKGNILGEFTNGKTFAVAKIAM 760

Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIH 215
            SV  + G      +          +      T     +K   LE SN +    + ++I 
Sbjct: 761 ASVANNSGLEEIGGNLFKVTANSGNIVVGEAGTGGRGEMKTSALEMSNVDLSRSLTELII 820

Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239
           + + + + +  I  +++ +   I+
Sbjct: 821 IQRGYQANSKTISTSDQMLQTLIQ 844


>gi|291277389|ref|YP_003517161.1| putative flagellar basal-body rod protein [Helicobacter mustelae
           12198]
 gi|290964583|emb|CBG40436.1| putative flagellar basal-body rod protein [Helicobacter mustelae
           12198]
          Length = 289

 Score = 95.7 bits (236), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 50/275 (18%), Positives = 108/275 (39%), Gaps = 32/275 (11%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           MQ  +   +   +    RL  +++N++N +T  F+   V   + +   +    +      
Sbjct: 13  MQNGYYNAVGGMVTQFNRLDAISNNLANLNTNAFKRDDVVIGDYLRLYETYQQELPLKNN 72

Query: 61  SGK-----------------EYLSKEVGSFISTGTELDFAL-EGDAWFALESPRGIILTR 102
           + +                  Y  + +G+ + T   LDFAL + + +FA+++P+G+  TR
Sbjct: 73  TKEAAKFINRALDRVPIISDSYSDQSLGAMMQTDNPLDFALSKENLYFAIQTPQGVRYTR 132

Query: 103 DGRFKVTDDGSLVSASGKYPVLD-----------MASVPIQIPQKDEIFNVGEKGEISQK 151
           DG F V +DG L +  G + +                  I+  +   I+      E   +
Sbjct: 133 DGSFVVGEDGMLSTKEGYHVLSRTGLENEEGIAINVQSQIEADKNGNIYFRVSDNEAVGE 192

Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIP--PTPLEDLSGVTVKRGFLEDSNANSMYE 209
            +    + + S    +   +   +  S             +  +V++ FLE SN N++ E
Sbjct: 193 AEQNNAIAVVSFVNPRLLKKEGKNLYSYPEDKKSDRQNLATTESVRQSFLEKSNVNAVIE 252

Query: 210 MGQMIHLTQKFNSITTLIDEN-EKSMLEAIRNIAS 243
           M  +I   +  +  + ++  + +    EAI  +A+
Sbjct: 253 MTNLIETNRLVDMYSKVLKTHMDDLNTEAISKLAT 287


>gi|238927475|ref|ZP_04659235.1| flagellar hook protein FlgE [Selenomonas flueggei ATCC 43531]
 gi|238884757|gb|EEQ48395.1| flagellar hook protein FlgE [Selenomonas flueggei ATCC 43531]
          Length = 680

 Score = 95.7 bits (236), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 31/146 (21%), Positives = 55/146 (37%), Gaps = 13/146 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S    ++     + R+  V +N++N +T GF+  +V F++++    +          
Sbjct: 1   MIRSMFSAVSGLKGHQTRMDVVGNNIANVNTTGFKASRVTFADMISQNLSGASAPNGTIG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFAL-EGDAWFALESPRGIILTRDGRFK 107
                Q    ++     L    GS   TG   D A+  GD  F +   +    TR+G F 
Sbjct: 61  GVNPKQIGLGMSVASTDLLYTNGSVQQTGKNTDIAISRGDGLFVVSKGQQKFYTRNGAFS 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQI 133
              +G+L   S    V    +    I
Sbjct: 121 FDAEGNLTIPSTGLYVQGYMANNGVI 146



 Score = 73.7 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 12/88 (13%), Positives = 28/88 (31%), Gaps = 4/88 (4%)

Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTV----KRGFLEDSNANSMYEMG 211
           A + +   +   G  +   +    +             +        LE SN +   +  
Sbjct: 590 AQIAMAQFNNPSGLTKMGGNLYQESNNSGTRTISGASDIGTELTTSALEMSNVDLADQFS 649

Query: 212 QMIHLTQKFNSITTLIDENEKSMLEAIR 239
            MI   + F S + +I  +++ +   I 
Sbjct: 650 DMIITQRGFQSNSKMITVSDEMLETLIN 677


>gi|160880840|ref|YP_001559808.1| hypothetical protein Cphy_2708 [Clostridium phytofermentans ISDg]
 gi|160429506|gb|ABX43069.1| protein of unknown function DUF1078 domain protein [Clostridium
           phytofermentans ISDg]
          Length = 479

 Score = 95.7 bits (236), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 51/142 (35%), Gaps = 15/142 (10%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  S   G++     + ++  + +N+SN +TVGF+     FS+++               
Sbjct: 1   MMRSLYSGVSGLRVHQTKMDVIGNNISNVNTVGFKASSATFSDILYQTTKSASGPNPNTG 60

Query: 61  SGKEYLS---------------KEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGR 105
           +                      + G    T    D  +EGD +F + +  G   T+ G 
Sbjct: 61  TAGTNAMQIGLGANLASITASITKTGGSQRTDNPFDLMIEGDGFFVVNNGVGNFFTKAGS 120

Query: 106 FKVTDDGSLVSASGKYPVLDMA 127
           F V   G+L + +G   +    
Sbjct: 121 FNVDAAGTLCTPTGATVMGWQP 142



 Score = 74.9 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 44/148 (29%), Gaps = 10/148 (6%)

Query: 98  IILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157
            +    G   V       +              I I Q+  IF   + G+    G+V+  
Sbjct: 333 TMYNNSGTTTVESTKGAKADGTGAGKAAGNMSGISIDQQGMIFGTYDNGDRKLLGQVVVA 392

Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSG------VTVKRGFLEDSNANSMYEMG 211
               +     G     N+  S          +             G LE SN +   +  
Sbjct: 393 ----TFSNPAGLEAIGNNMFSATPNSGEFNGVGEDITSSGGKFITGVLEMSNVDLSQQFT 448

Query: 212 QMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +MI   + F + + +I  ++  + E I 
Sbjct: 449 EMITTQRGFQANSRIITTSDTLLEELIN 476


>gi|289666047|ref|ZP_06487628.1| flagellar hook protein FlgE [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 407

 Score = 95.7 bits (236), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 57/128 (44%), Gaps = 2/128 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--ISFVAS 61
            FN  L+   A    L+  ++N++N +T GF+  + +F+++  +    + +    S V  
Sbjct: 2   GFNTSLSGINAANADLNVTSNNIANVNTTGFKESRAEFADMFQSTSYGLSRNAVGSGVRV 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
                    G+   TG  LD A+ G+ +F + S    + TR G F+   +G +V+  G  
Sbjct: 62  SNVAQQFSQGNIDPTGRSLDLAISGEGFFTVSSNGAKMYTRAGNFQTDANGYVVNPQGAR 121

Query: 122 PVLDMASV 129
             +   + 
Sbjct: 122 LQVFAPNP 129



 Score = 74.9 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 33/92 (35%), Gaps = 5/92 (5%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSM 207
           K +  + L S    QG   + N+  + +         +        V+ G LE S  +  
Sbjct: 314 KPLGQVALSSFVNPQGLQSQGNNMWAESYTSGAARTGAPNTSDLGQVESGSLEASTVDLT 373

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            ++  MI   + F + + +I   ++     I 
Sbjct: 374 EQLVNMIVAQRNFQANSQMISTQDQVTQTIIN 405


>gi|268680907|ref|YP_003305338.1| flagellar hook protein FlgE [Sulfurospirillum deleyianum DSM 6946]
 gi|268618938|gb|ACZ13303.1| flagellar hook protein FlgE [Sulfurospirillum deleyianum DSM 6946]
          Length = 851

 Score = 95.7 bits (236), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 59/182 (32%), Gaps = 14/182 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  +   G+    A +  +   ++N++N +T G++  +  FS ++               
Sbjct: 1   MMRALWAGVTGLQAHQIAMDVESNNIANVNTTGYKYSRANFSNLLSQTVSIATAPQGELG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGRF 106
             +  Q              E GS  +T  + D A+ GD +F +    G     TR+G F
Sbjct: 61  GKNSMQIGLGTTISTVTKIFEQGSIETTDKDTDLAISGDGFFVVSPDGGTTYKYTRNGDF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
               +G+ V ++G      +              +               ++     ++ 
Sbjct: 121 SFDANGNFVDSNGYIIQGWLRDQETGQIDTTSPISNILITPGYTTPANATSIVSIKANLD 180

Query: 167 QG 168
            G
Sbjct: 181 SG 182



 Score = 74.1 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 10/94 (10%), Positives = 32/94 (34%), Gaps = 5/94 (5%)

Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNAN 205
           +   +A + + +   + G      +                      +V+   LE SN +
Sbjct: 756 RSFALAQVAMSTFTNNGGLESDGGNCYIQTSNSGDPVFGQAGTGGKGSVQSSSLEMSNVD 815

Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
               + Q+I + + + + +  I   ++ +   ++
Sbjct: 816 LSRSLTQLIVIQRGYQANSKTITTADEMLNTLLQ 849


>gi|146281771|ref|YP_001171924.1| flagellar hook protein FlgE [Pseudomonas stutzeri A1501]
 gi|145569976|gb|ABP79082.1| flagellar hook protein FlgE [Pseudomonas stutzeri A1501]
          Length = 438

 Score = 95.3 bits (235), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 79/203 (38%), Gaps = 8/203 (3%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASG 62
           FN+ L+   A    L+   +N++N  T GF+  + +F+++       +  +   S V + 
Sbjct: 3   FNVALSGLNAASTDLNVTGNNIANVGTTGFKASRAEFADLYATSMLGSGGNAVGSGVTTA 62

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                   G+  +TG  LD A+ G+ +F + +   ++ TR G FK  D+G ++++ G   
Sbjct: 63  DIAQQFTQGNITNTGNSLDLAISGNGYFMVSNNGSMLYTRAGAFKTDDEGYVINSEGYNL 122

Query: 123 VLDMASVPIQI-----PQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS-G 176
                +    I            +       S   + +A     SV  +  F   ++S  
Sbjct: 123 QGYGVNANGDIVSGVTTNLKVDSSNQAPNATSSVVETLALNSNSSVPNNTPFDASDSSTY 182

Query: 177 ISPNIPPTPLEDLSGVTVKRGFL 199
                 P      +  T+ + F+
Sbjct: 183 NWSTSVPLYDTQGNSHTMTQYFV 205



 Score = 71.1 bits (172), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 18/123 (14%), Positives = 41/123 (33%), Gaps = 5/123 (4%)

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
           PV D  +         +   +      + + KVI  + L +   SQG      +  +  +
Sbjct: 314 PVQDGYTTGQLSGLSIDDTGMMFATYTNGQSKVIGQVVLANFTNSQGLASVGGTAWAQTL 373

Query: 182 PPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                   +  +     ++ G LEDSN +   ++  +I   + + +    ++        
Sbjct: 374 ASGEPAIGTPGSGTLGSLQSGALEDSNVDLTAQLVNLIVAQRNYQANAKTVETESAIAQT 433

Query: 237 AIR 239
            I 
Sbjct: 434 IIN 436


>gi|326796597|ref|YP_004314417.1| flagellar hook-basal body protein [Marinomonas mediterranea MMB-1]
 gi|326547361|gb|ADZ92581.1| flagellar hook-basal body protein [Marinomonas mediterranea MMB-1]
          Length = 565

 Score = 95.3 bits (235), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 3/126 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI---KNDIDQKISFVA 60
            FN  L+   A    L    +N++N DT GF+  +++F ++           +   S V+
Sbjct: 2   GFNTALSGIKASADYLGVTGNNIANADTTGFKKSRIEFGDLYNTNVIGSGSSNTIGSGVS 61

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
                     G++  TG  LD A++G  +F ++       TR G FK+ ++G+LV+  G 
Sbjct: 62  VNNVAQDFSAGNYNDTGNNLDVAIDGSGFFVVDQGGVQTYTRAGDFKLDEEGNLVTNDGG 121

Query: 121 YPVLDM 126
           +     
Sbjct: 122 FVQGYN 127



 Score = 79.1 bits (193), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 19/149 (12%), Positives = 44/149 (29%), Gaps = 5/149 (3%)

Query: 96  RGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI 155
               LT +      D       S      D  +         +          +Q+   +
Sbjct: 415 DPTNLTGELEISFDDSTQYAITSTDTFSQDGFAAGELQGVSFDEDGFLVATYTNQQTATL 474

Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEM 210
             + L + D + G     ++G   +              +  ++K G LE+SN +   E+
Sbjct: 475 GQIALATFDNTDGLNPSGDTGWVASSSSGAANIGKANTGTLGSIKGGSLEESNVDLTSEL 534

Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             +I   + + + +  ++         I 
Sbjct: 535 VALIEAQRNYQANSKTLETENTVTQTIIN 563


>gi|90408060|ref|ZP_01216231.1| flagellar hook protein [Psychromonas sp. CNPT3]
 gi|90310817|gb|EAS38931.1| flagellar hook protein [Psychromonas sp. CNPT3]
          Length = 473

 Score = 95.3 bits (235), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 40/196 (20%), Positives = 72/196 (36%), Gaps = 6/196 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61
           SFNI L+   A +  L + A+N++N +TVGF+  + +F  V       N   +    V++
Sbjct: 2   SFNIALSGISAAQTDLDSTANNIANVNTVGFKESRAEFESVYANSLFTNSKTKVGDGVST 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII---LTRDGRFKVTDDGSLVSAS 118
                    GS   T   LD A+ G  +FA            TR G FK+  +  +V  S
Sbjct: 62  AAVAQQFHQGSLKFTQNPLDLAITGSGFFATAGNLEDRDLSYTRSGTFKLNSENFVVDNS 121

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178
           G Y      +                +   +    +  +    ++++  G  +  +    
Sbjct: 122 GNYLQAFPVNEDGTSSSVSLSTTQPIQIPETAGTPIPTSEIGITLNLPAG-DKALDPAKF 180

Query: 179 PNIPPTPLEDLSGVTV 194
               P    + + VT+
Sbjct: 181 DPDDPDTYNNATSVTI 196



 Score = 71.8 bits (174), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 16/97 (16%), Positives = 34/97 (35%), Gaps = 4/97 (4%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP----LEDLSGVTVKRGFLEDS 202
             +   + ++ + +      QG  +  +S I+      P        S   V    LE S
Sbjct: 375 YSNGTSQPLSRVSIVRFRNEQGLTQTGSSWIATQNSGEPLAGEANSGSFGAVNSAALEQS 434

Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           N N   E+  +I   + F + +  ++ N       ++
Sbjct: 435 NVNLTTELVDLITAQRNFQANSRALEINNTLQQTILQ 471


>gi|283953666|ref|ZP_06371197.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni 414]
 gi|283794707|gb|EFC33445.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni 414]
          Length = 864

 Score = 95.3 bits (235), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 58/183 (31%), Gaps = 14/183 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G++   A +  +    +N+SN +T GF+  +  F  +                
Sbjct: 1   MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATAPTDGRG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106
             +  Q    V+          GS  +T    D A+ GD +F +         LTR G F
Sbjct: 61  GQNPLQIGLGVSVNSTTRIHSQGSVQTTDKNTDVAINGDGFFMVSDDGGLTNYLTRSGDF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           K+   G+ V+ +G        +   Q                       +T      +++
Sbjct: 121 KLDAYGNFVNNAGFVVQGWNINWDDQTIDSSRTPQNIFVDPGMHIPAAQSTEVAIKANLN 180

Query: 167 QGF 169
            G 
Sbjct: 181 SGL 183



 Score = 72.6 bits (176), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 17/144 (11%), Positives = 46/144 (31%), Gaps = 5/144 (3%)

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           T      +    S  + +G+      +        + +          + K   +A + +
Sbjct: 718 TSGSNDGLVSSNSASTLTGQATDGYTSGNLKPDAIRVDDKGNILGEFTNGKTFAVAKIAM 777

Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIH 215
            SV  + G      +          +      T     +K   LE SN +    + ++I 
Sbjct: 778 ASVANNSGLEEIGGNLFKVTANSGNIVVGEAGTGGRGEMKTSALEMSNVDLSRSLTELII 837

Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239
           + + + + +  I  +++ +   I+
Sbjct: 838 IQRGYQANSKTISTSDQMLQTLIQ 861


>gi|313200563|ref|YP_004039221.1| flagellar basal body flae domain-containing protein [Methylovorus
           sp. MP688]
 gi|312439879|gb|ADQ83985.1| flagellar basal body FlaE domain protein [Methylovorus sp. MP688]
          Length = 402

 Score = 95.3 bits (235), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 32/123 (26%), Positives = 59/123 (47%), Gaps = 2/123 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ--KISFVAS 61
           SF  GL+   A  + L  + +N++N +TVGF+  + +F++V     N          V  
Sbjct: 2   SFQQGLSGLNAASKSLDVIGNNVANANTVGFKQSRAEFADVYANALNGSGTGSAGIGVKV 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
                    G+  +T   LD A+ G+ +F L +   I  +R+G+F++   G +V++SG+ 
Sbjct: 62  ADIQRQFTQGNITNTENPLDIAINGNGFFRLSNSGAITYSRNGQFQLDKAGYIVTSSGER 121

Query: 122 PVL 124
              
Sbjct: 122 LTG 124



 Score = 74.1 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 31/98 (31%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLED 201
             + + K +A + L       G     N+  +                   T++    ED
Sbjct: 303 YTNGQAKALAQVVLAKFANPNGLSALGNNQFAETADAGVPVIGKAGTGGLGTLQSSATED 362

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E+  MI   + + +    I   ++ +   + 
Sbjct: 363 SNVDLTAELVNMITAQRYYQANAQTIKTQDQVLQTLVN 400


>gi|303240279|ref|ZP_07326798.1| fagellar hook-basal body protein [Acetivibrio cellulolyticus CD2]
 gi|302592189|gb|EFL61918.1| fagellar hook-basal body protein [Acetivibrio cellulolyticus CD2]
          Length = 439

 Score = 95.3 bits (235), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 53/142 (37%), Gaps = 16/142 (11%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++   A + ++  + +N++N +TV +++ +V F EV                
Sbjct: 1   MMRSMFSGVSGLRAHQTKMDVIGNNVANVNTVAYKSGRVTFQEVFSQTIKGAGAPDTATG 60

Query: 54  -------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL--TRDG 104
                  Q    +           GS   T    D A+EGD +F ++         TR G
Sbjct: 61  RGGTNPMQVGLGIGVSSVDTITTRGSLQRTDNPTDLAIEGDGFFIVKGGSADTYRFTRAG 120

Query: 105 RFKVTDDGSLVSASGKYPVLDM 126
            F +   G+LV+ SG       
Sbjct: 121 NFGIDKTGNLVTGSGMNVYGWQ 142



 Score = 86.8 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 19/121 (15%), Positives = 41/121 (33%), Gaps = 6/121 (4%)

Query: 125 DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT 184
           D  S    +        +      + + + +  + L S +   G  +  N+   P     
Sbjct: 316 DGYSTGTLVSFSIGSDGIITGIYSNGQQQPLGLIALASFENPAGLQKSGNNMFIPTTNSG 375

Query: 185 PLEDL------SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
             +           T+  G LE SN +   E   MI   + F + + +I  +++ + E +
Sbjct: 376 DFKKGVKAGSEGVGTLNPGTLEMSNVDLSTEFTDMIVTQRGFQANSRIITTSDEMLQELV 435

Query: 239 R 239
            
Sbjct: 436 N 436


>gi|239995125|ref|ZP_04715649.1| flagellar hook protein FlgE [Alteromonas macleodii ATCC 27126]
          Length = 461

 Score = 95.3 bits (235), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 68/170 (40%), Gaps = 5/170 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61
           SFNI L+   A ++ L   A+N++N +TVGF+  + +F +V  A        +    V +
Sbjct: 2   SFNIALSGVSAAQKDLDVTANNIANVNTVGFKESRAEFGDVYAASLLSGGKTKVGDGVLT 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII---LTRDGRFKVTDDGSLVSAS 118
            +       GS   T T LD A+ G+ +FA            TR G+FK+  D  +V+++
Sbjct: 62  QEVAQQFSQGSLQFTNTSLDLAITGNGFFATVPEITSRDFSFTRAGQFKLDSDNFVVNSN 121

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
           G   +    +                +   S       T     +++  G
Sbjct: 122 GDNLLGFPVNSDGTSASVALSTTEPVRIPDSSGSPAQTTEVDIRMNLPAG 171



 Score = 63.7 bits (153), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 15/93 (16%), Positives = 30/93 (32%), Gaps = 5/93 (5%)

Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANS 206
            + I  + L      QG  +  ++    +I           T     +    LE +N N 
Sbjct: 367 SEPIVRVALVRFSNEQGLTQESSTQWKESILSGEALAGEATTGTFGEINSSALEQANVNL 426

Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             E+  MI   + F + +  ++ N       + 
Sbjct: 427 TTELIDMIIAQRNFQANSRALEVNNSLNQTILN 459


>gi|57236913|ref|YP_179866.1| flagellar hook protein FlgE [Campylobacter jejuni RM1221]
 gi|57165717|gb|AAW34496.1| flagellar hook protein [Campylobacter jejuni RM1221]
 gi|315059173|gb|ADT73502.1| Flagellar hook subunit protein [Campylobacter jejuni subsp. jejuni
           S3]
          Length = 845

 Score = 95.3 bits (235), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 59/183 (32%), Gaps = 14/183 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G++   A +  +    +N+SN +T GF+  +  F  +                
Sbjct: 1   MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATAPTDGRG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106
            ++  Q    V+          GS  +T    D A+ GD +F +         LTR G F
Sbjct: 61  GSNPLQIGLGVSVSSTTRIHSQGSVQTTDKNTDVAINGDGFFMVSDDGGLTRYLTRSGDF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           K+   G+ V+ +G        +   Q                       +T      +++
Sbjct: 121 KLDAYGNFVNNAGFVVQGWNINWDDQTIDSSRSPQNIFIDPGMHIPAAKSTEVAIKANLN 180

Query: 167 QGF 169
            G 
Sbjct: 181 SGL 183



 Score = 73.0 bits (177), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 17/144 (11%), Positives = 46/144 (31%), Gaps = 5/144 (3%)

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           T      +    S  + +G+      +        + +          + K   +A + +
Sbjct: 699 TSGSNDGLVSSNSASTLTGQATDGYTSGNLKPDAIRVDDKGNILGEFTNGKTFAVAKIAM 758

Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIH 215
            SV  + G      +          +      T     +K   LE SN +    + ++I 
Sbjct: 759 ASVANNSGLEEIGGNLFKVTANSGAIVVGEAGTGGRGEMKTSALEMSNVDLSRSLTELII 818

Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239
           + + + + +  I  +++ +   I+
Sbjct: 819 IQRGYQANSKTISTSDQMLQTLIQ 842


>gi|330893070|gb|EGH25731.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           mori str. 301020]
          Length = 202

 Score = 95.3 bits (235), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 34/181 (18%), Positives = 67/181 (37%), Gaps = 16/181 (8%)

Query: 10  AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------------QKI 56
               A +  L+T+++N++N  T GF++ + +F +++  IK                 Q  
Sbjct: 22  TGLAAQDTNLTTISNNLANVSTTGFKSDRAEFQDLLYQIKRQPGAQSTQDSELPSGLQLG 81

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLV 115
           + V       +   GS  +T   LD A+ G  +F +  P G    +RDG F +  +G +V
Sbjct: 82  TGVRIVGTQKNFTAGSLQTTNNPLDLAVNGRGFFQVTQPDGTVAYSRDGTFHLDANGQIV 141

Query: 116 SASGK--YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRE 173
           +A+G    P + +           +          +   ++I  +         G     
Sbjct: 142 TANGYALEPAIVVPQNAQTFTVGQDGTVSVTLAGATATPQIIGNIQTADFINPAGLQAIG 201

Query: 174 N 174
            
Sbjct: 202 G 202


>gi|149182512|ref|ZP_01860985.1| flagellar hook protein [Bacillus sp. SG-1]
 gi|148849772|gb|EDL63949.1| flagellar hook protein [Bacillus sp. SG-1]
          Length = 396

 Score = 95.3 bits (235), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 65/201 (32%), Gaps = 12/201 (5%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID----------- 53
              G++     + +L  + +N++N +T GF+  +V F + +    +              
Sbjct: 1   MYSGISGMKNFQTKLDVIGNNIANVNTYGFKKGRVTFKDTMNQTISGASAAQEARGGRNP 60

Query: 54  -QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDG 112
            Q                 S  STG  LD A+ GD +F ++       +R G F + D+G
Sbjct: 61  MQVGLGSTLSTIDTIHTQSSLQSTGRPLDLAINGDGYFVVKQGDAQFYSRAGNFYLDDNG 120

Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172
           +LV+  G         V   I          +  E       ++   + +    Q     
Sbjct: 121 TLVNGDGMKVQSYENGVLQDIKVNVNAQLPAKITESISMFGNLSNDAVGNEPFVQQINVV 180

Query: 173 ENSGISPNIPPTPLEDLSGVT 193
            N G    +        +  T
Sbjct: 181 TNDGKQITLDMKLTPQGTPST 201



 Score = 83.0 bits (203), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 57/189 (30%), Gaps = 7/189 (3%)

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVS 116
            F+    +         +  G  +D A        L       +T++    +        
Sbjct: 206 EFINQNGDTPLNSAAYVLDFGNPVDPAANPPN-VDLPYTDSNGITQNLNVTMDYTQLTNL 264

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV--IATMGLYSVDMSQGFVRREN 174
                   D         +   I ++GE   +   G++  I  + L       G  +   
Sbjct: 265 GGDLSAAADPDGNTAGSLESFNIGSMGEINGVYSNGEITTIGYLALAKFSNPSGLTKAGG 324

Query: 175 SGISPNIPPTPLEDL----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
           +    ++               T+  G LE SN +   E  +MI   + F + T +I  +
Sbjct: 325 NSFQQSVNSGTPNVNVAGEGRGTIVSGSLEMSNVDLSEEFTEMISAQRGFQANTRIITTS 384

Query: 231 EKSMLEAIR 239
           ++ + E + 
Sbjct: 385 DEILQELVN 393


>gi|121596117|ref|YP_988013.1| hypothetical protein Ajs_3830 [Acidovorax sp. JS42]
 gi|120608197|gb|ABM43937.1| protein of unknown function DUF1078 domain protein [Acidovorax sp.
           JS42]
          Length = 538

 Score = 95.3 bits (235), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 36/187 (19%), Positives = 71/187 (37%), Gaps = 3/187 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN--DIDQKISFVAS 61
            F  GL+   A  + L  +  N++N++T GF+  + +F+ ++ +             V  
Sbjct: 2   GFQQGLSGLNASAKNLDVIGHNIANSNTTGFKASRTEFAAMIASAIGAASGTNSGIGVEV 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLVSASGK 120
                    G+   TG  LD A+ G+ +F L+ P G    TR G FK+ + G++V+  G 
Sbjct: 62  SAIAQQFNQGNLTVTGNSLDVAINGNGFFTLQMPDGSRAYTRAGNFKLDNVGNVVTNDGA 121

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
             +         +        +          +    +       ++    + +S  +P 
Sbjct: 122 QVMGYPIDPVTGLRTSSTAVPLTFPTTAPIPARQTTAIKTAFNLDARTPNAKGDSSATPP 181

Query: 181 IPPTPLE 187
           +P TP  
Sbjct: 182 VPETPRT 188



 Score = 78.8 bits (192), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 14/89 (15%), Positives = 29/89 (32%), Gaps = 5/89 (5%)

Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEM 210
             + L S   +QG      +              +        ++ G LEDSN +   E+
Sbjct: 448 GQVALASFRNTQGLAAVGGNNWVETYESGQPVMGAPTDGNFGALRAGALEDSNVDLTAEL 507

Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             M+   + + +    I   ++ M   + 
Sbjct: 508 VNMMTAQRAYQANAQTIKTQDQVMSTLVN 536


>gi|58582195|ref|YP_201211.1| flagellar hook protein FlgE [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84624088|ref|YP_451460.1| flagellar hook protein FlgE [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|58426789|gb|AAW75826.1| flagellar biosynthesis hook protein [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84368028|dbj|BAE69186.1| flagellar biosynthesis hook protein [Xanthomonas oryzae pv. oryzae
           MAFF 311018]
          Length = 407

 Score = 95.3 bits (235), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 58/128 (45%), Gaps = 2/128 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--ISFVAS 61
           +FN  L+   A    L+  ++N++N +T GF+  + +F+++  +    + +    S V  
Sbjct: 2   AFNTSLSGISAANADLNVTSNNIANVNTTGFKESRAEFADMFQSTSYGLSRNAVGSGVRV 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
                    G+   TG  LD A+ G+ +F + S    + TR G F+   +G +V+  G  
Sbjct: 62  SNVAQQFSQGNIDPTGRSLDLAISGEGFFTVSSNGAKMYTRAGNFQTDANGYVVNPQGAR 121

Query: 122 PVLDMASV 129
             +   + 
Sbjct: 122 LQVFAPNP 129



 Score = 74.5 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 34/92 (36%), Gaps = 5/92 (5%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSM 207
           K +  + L S    QG   + N+  + +         +  T     ++ G LE S  +  
Sbjct: 314 KPLGQVALSSFVNPQGLQSQGNNMWAESYTSGAARTSAPGTSDLGQIESGSLESSTVDLT 373

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            ++  MI   + F + + +I   ++     I 
Sbjct: 374 EQLVNMIVAQRNFQANSQMISTQDQVTQTIIN 405


>gi|50954410|ref|YP_061698.1| flagellar hook protein [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|50950892|gb|AAT88593.1| flagellar hook protein [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 390

 Score = 95.3 bits (235), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 31/138 (22%), Positives = 51/138 (36%), Gaps = 12/138 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  S + G+    A +  L   A+N++N +T GF+   V+F + +  +            
Sbjct: 1   MLRSLDSGVFGLQAQQTMLDVTANNIANVNTAGFKASSVQFEDALSQVTRTASAPTDVIG 60

Query: 56  -------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                     V +         G+  +TG   +  L GD +F + S      TR G F  
Sbjct: 61  GTTPAAVGLGVRAAGIDTDWTQGATQTTGKATNLTLNGDGFFVIRSAGQTQYTRAGNFTT 120

Query: 109 TDDGSLVSASGKYPVLDM 126
            D G+LV+  G       
Sbjct: 121 DDSGTLVTPDGARVQGWG 138



 Score = 71.4 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 15/88 (17%), Positives = 33/88 (37%), Gaps = 3/88 (3%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLE---DLSGVTVKRGFLEDSNANSMYEMG 211
           I  + + +     GF +  +S  +        +   D    T+  G  E SN +   E  
Sbjct: 299 IGRVAVATFSNPSGFQKAGSSAFTATADSGIPQVAADSGTGTITVGAYEGSNVDLGREFT 358

Query: 212 QMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +I   + F +   +I  +++ + E  +
Sbjct: 359 NLIVSQRAFQASARVITTSDEILQELTQ 386


>gi|242309658|ref|ZP_04808813.1| flagellar hook protein [Helicobacter pullorum MIT 98-5489]
 gi|239523659|gb|EEQ63525.1| flagellar hook protein [Helicobacter pullorum MIT 98-5489]
          Length = 750

 Score = 94.9 bits (234), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 33/141 (23%), Positives = 53/141 (37%), Gaps = 14/141 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++   A +  L   ++N++N +T GF+  +  FS +V   K           
Sbjct: 1   MLRSLWSGVSGMQAHQVALDVESNNIANVNTNGFKYSRADFSTMVSQTKRSATIPYAGYG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106
                                 GS  +T  + D ALEG+  F + +      + TRDG F
Sbjct: 61  GVNDYSVGLGTGIETTTKVFSQGSLQNTDRKADLALEGNGMFVVSNNGGFTNMYTRDGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMA 127
                G+LV+ SG      + 
Sbjct: 121 SFDAVGNLVTTSGYIVQGWVR 141



 Score = 63.3 bits (152), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 13/127 (10%), Positives = 42/127 (33%), Gaps = 5/127 (3%)

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           +       D  +  +      +          + +   +A + + +    +G     ++ 
Sbjct: 620 SQANKVTGDGYASGMLQDFYFDATGTMIGKFDNGQNLALAQVAVATFANYEGLQESGSNL 679

Query: 177 ISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
            S +         +  T     ++   LE SN +    + Q+I + + F + +  I  ++
Sbjct: 680 YSESPNSGQATIGTAGTGGRANIQASKLEMSNTDLSRGLTQLIVVQRGFQASSKSITTSD 739

Query: 232 KSMLEAI 238
           + +   +
Sbjct: 740 QILNTLL 746


>gi|315928464|gb|EFV07776.1| flagellar hook protein flgE [Campylobacter jejuni subsp. jejuni
           DFVF1099]
          Length = 437

 Score = 94.9 bits (234), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 59/183 (32%), Gaps = 14/183 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G++   A +  +    +N+SN +T GF+  +  F  +                
Sbjct: 1   MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATAPTDGRG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106
            ++  Q    V+          GS  +T    D A+ GD +F +         LTR G F
Sbjct: 61  GSNPLQIGLGVSVSSTTRIHSQGSVQTTDKNTDVAINGDGFFMVSDDGGLTRYLTRSGDF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           K+   G+ V+ +G        +   Q                       +T      +++
Sbjct: 121 KLDAYGNFVNNAGFVVQGWNINWDTQSIDSSRTPQNIFIDPGMHIPAAKSTEVAIKANLN 180

Query: 167 QGF 169
            G 
Sbjct: 181 SGL 183


>gi|71280733|ref|YP_268222.1| flagellar hook protein FlgE [Colwellia psychrerythraea 34H]
 gi|71146473|gb|AAZ26946.1| flagellar hook protein FlgE [Colwellia psychrerythraea 34H]
          Length = 554

 Score = 94.9 bits (234), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 40/196 (20%), Positives = 73/196 (37%), Gaps = 6/196 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61
           SFNI L+   A ++ L   ++N++N +TVGF+  + +F +V  +        +    V +
Sbjct: 2   SFNIALSGLNAAQKDLDVSSNNIANVNTVGFKESRAEFVDVYASSLLAAGKTKVGDGVLT 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESP---RGIILTRDGRFKVTDDGSLVSAS 118
                    GS   T   LD A+ G+ +FA            TR G+FK+  D  +V++ 
Sbjct: 62  ADVAQQFSQGSIQFTNNALDLAITGNGFFATVPELGSLETSYTRAGQFKLNSDNFVVNSQ 121

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178
           G + +    +                +           +     +++  G      S  +
Sbjct: 122 GGHLLGFPVNPDGSSASVSLSTAEPIRIPTESGTPTKTSEVDVRMNLPAG-AGYITSAPA 180

Query: 179 PNIPPTPLEDLSGVTV 194
              P  PL   S  +V
Sbjct: 181 NFDPEDPLTFNSSTSV 196



 Score = 67.2 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/245 (11%), Positives = 72/245 (29%), Gaps = 31/245 (12%)

Query: 10  AAQLALEQRLSTVADNMSNTDT----------VGFRTIKVKFSEVVGAIKNDIDQKISFV 59
           AA  A     + + ++++   T           G +  ++ ++     I          +
Sbjct: 324 AALNAQTVSETNLTNSLAIASTAISATTPESGTGTKGARLTYNSSGDFISQSPSPTNGGI 383

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119
            +         G+  +   ++DF L+         P     T+            V+A  
Sbjct: 384 RTVDFSSHLPNGADPTQTVKVDFNLD------TAGPNPNEPTQFAS------NFEVTALN 431

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
           +  +       I+I     +      G      ++     + +    QG  +   S    
Sbjct: 432 QDGLAVGRLTGIEIGVDGLVRATYSNGTSQPLSRI----AMVNFANEQGLSQTGGSNWKE 487

Query: 180 N-----IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
           +              +  T+    LE SN N   E+  +I   + F + +  ++ + +  
Sbjct: 488 SLVSGKALAGEAGSGTFGTINSSALEQSNVNLTTELIDLISAQRNFQANSRALEVDNQLN 547

Query: 235 LEAIR 239
              ++
Sbjct: 548 QTILQ 552


>gi|304570583|ref|YP_388203.2| flagellar hook protein FlgE [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 547

 Score = 94.9 bits (234), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 34/134 (25%), Positives = 56/134 (41%), Gaps = 5/134 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA---IKNDIDQKISFVA 60
           S   G++  LA  +R++ + +N++N +TVGF+  ++ F + +       +   Q    V 
Sbjct: 6   SMWTGISGLLAHGERMNVLGNNIANVNTVGFKGARMDFEDFISQDVNTASGTRQVGRGVG 65

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI--ILTRDGRFKVTDDGSLVSAS 118
            G  Y     GSF +T    D A+ G  +FA+          TR G F+   +G LV   
Sbjct: 66  IGTIYGDFSQGSFETTTEATDLAIGGRGFFAVSPKGEETAYYTRAGNFRFDKEGYLVDPH 125

Query: 119 GKYPVLDMASVPIQ 132
           G          P  
Sbjct: 126 GYVLQGWQIETPRP 139



 Score = 78.4 bits (191), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 55/216 (25%), Gaps = 8/216 (3%)

Query: 30  DTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAW 89
            T G+      FS +  +  + +       A                 T     +   + 
Sbjct: 331 STNGYPMFVANFSGI--SNASYVTPNPDPAAQPYIMELNLGLKNSDPSTWASAGVSNASL 388

Query: 90  FALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEIS 149
                     L      + +   S   +S              +       +   +G  S
Sbjct: 389 VGTNVANLPSLGNQAERQSSATTSFSGSSSTPTRYQDGYTFGFLQNVTVTRDGILQGRYS 448

Query: 150 QKGKV-IATMGLYSVDMSQGFVRRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSN 203
               + +  + LY         R   +  S +       P P       TV    LE SN
Sbjct: 449 NGAVLDLYQITLYDFQSKDNLRREGGNLFSESNASGLAAPGPANANGYGTVNSNSLEQSN 508

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +   E   MI   + F S + +I   +  +   I+
Sbjct: 509 VDLAKEFVNMITTQRGFQSNSKVITTTDTMLEVVIQ 544


>gi|228920482|ref|ZP_04083827.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|228839112|gb|EEM84408.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
          Length = 249

 Score = 94.9 bits (234), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 80/246 (32%), Gaps = 15/246 (6%)

Query: 11  AQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DIDQKISFVASG 62
             +   QR++  ++N++N  T GF+   +        +          +I      V   
Sbjct: 2   GMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIGSVDYAVVPA 61

Query: 63  KEYLSKEVGSFISTGTELDF-----ALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSA 117
             +++   G+   T +  DF     A    ++F         LTRDG F +  D  L ++
Sbjct: 62  ATHVNLVQGNIQMTNSATDFFLDDGAAGTTSFFVTSKNDETFLTRDGSFTLNSDRYLQTS 121

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG--FVRRENS 175
           SG + + +                             I  +   +VD       V+REN 
Sbjct: 122 SGAFVIGENNERIRIPEGAKVAVQADGTLYDEVTQNNIGRLQTKTVDAETNARLVQRENK 181

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
             +               VK   LE+SN +   EM  ++   +   +   ++   +K   
Sbjct: 182 SFTLAEGNIANLPNGTGIVKNHMLENSNVDMTKEMADLMTDQKMIQASQRVMTSFDKIYE 241

Query: 236 EAIRNI 241
           +    I
Sbjct: 242 KEANEI 247


>gi|94986792|ref|YP_594725.1| flagellar hook protein FlgE [Lawsonia intracellularis PHE/MN1-00]
 gi|94731041|emb|CAJ54404.1| Flagellar hook protein FlgE [Lawsonia intracellularis PHE/MN1-00]
          Length = 502

 Score = 94.9 bits (234), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 35/175 (20%), Positives = 63/175 (36%), Gaps = 7/175 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-------KNDID 53
           M  S  IG          L TV++N++N +T+G++  +V F ++               +
Sbjct: 1   MMGSLFIGATGMKTHSTGLGTVSNNIANANTIGYKQQQVVFQDLFSQDLAIGSTGSQGPN 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113
           Q       G        G+F    +  D A+ G  +F +     +  TR G F+ T DG 
Sbjct: 61  QAGMGAQVGSVRTIFTQGAFEPGNSVTDLAIGGKGFFQVTLEDKVHYTRAGNFRFTQDGF 120

Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
           L   SG   +    S    I ++       +  + +       T    +  ++ G
Sbjct: 121 LNDPSGFTLMGSRISNNPNIKKETLEPIQLDFNDPTVAKSPAKTSTALNAVVNLG 175



 Score = 72.6 bits (176), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 28/82 (34%), Gaps = 5/82 (6%)

Query: 162 SVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHL 216
                 G  R  N+  S  +     E       +   +    LE SN +   EM  MI +
Sbjct: 417 RFTSEDGLRREGNNHYSATLDSGGPEFGLPGTSNYGKLSVNQLETSNVDMSREMVNMIII 476

Query: 217 TQKFNSITTLIDENEKSMLEAI 238
            + F   +  +   +  + +A+
Sbjct: 477 QRGFQMNSKSVTTADTMLQKAL 498


>gi|228926808|ref|ZP_04089876.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|229090737|ref|ZP_04221970.1| Flagellar basal-body rod protein flgG [Bacillus cereus Rock3-42]
 gi|228692679|gb|EEL46405.1| Flagellar basal-body rod protein flgG [Bacillus cereus Rock3-42]
 gi|228832921|gb|EEM78490.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
          Length = 249

 Score = 94.9 bits (234), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 83/246 (33%), Gaps = 15/246 (6%)

Query: 11  AQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DIDQKISFVASG 62
             +   QR++  ++N++N  T GF+   +        +          +I      V   
Sbjct: 2   GMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIGSVDYAVVPA 61

Query: 63  KEYLSKEVGSFISTGTELDFALEGDA-----WFALESPRGIILTRDGRFKVTDDGSLVSA 117
             +++   G+   T +  DF L+        +F         LTRDG F +  D  L + 
Sbjct: 62  ATHVNLVQGNIQMTNSATDFFLDDGTAGTASFFVTSKNNETFLTRDGSFTLNSDRYLQTT 121

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV--DMSQGFVRRENS 175
           SG + + +                       +     IA +   +V  + +   V+REN 
Sbjct: 122 SGAFVMGENNERIRIPEGAKVAVQADGTLYDAVTQNNIARLQTKTVGAEANNRLVQRENK 181

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
             +               VK   LE+SN +   EM  ++   +  ++   ++   +K   
Sbjct: 182 SFTLAEGNIADLPNGTGLVKNHMLENSNVDMTKEMADLMTDQRMISASQRVMTSFDKIYE 241

Query: 236 EAIRNI 241
           +    I
Sbjct: 242 KEANEI 247


>gi|166712062|ref|ZP_02243269.1| flagellar hook protein FlgE [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 407

 Score = 94.9 bits (234), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 58/128 (45%), Gaps = 2/128 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--ISFVAS 61
           +FN  L+   A    L+  ++N++N +T GF+  + +F+++  +    + +    S V  
Sbjct: 2   AFNTSLSGISAANADLNVTSNNIANVNTTGFKESRAEFADMFQSTSYGLSRNAVGSGVRV 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
                    G+   TG  LD A+ G+ +F + S    + TR G F+   +G +V+  G  
Sbjct: 62  SNVAQQFSQGNIDPTGRSLDLAISGEGFFTVSSNGAKMYTRAGNFQTDANGYVVNPQGAR 121

Query: 122 PVLDMASV 129
             +   + 
Sbjct: 122 LQVFAPNP 129



 Score = 74.9 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 33/92 (35%), Gaps = 5/92 (5%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSM 207
           K +  + L S    QG   + N+  + +         +        ++ G LE S  +  
Sbjct: 314 KPLGQVALSSFVNPQGLQSQGNNMWAESYTSGAARTGAPNTSDLGQIESGSLESSTVDLT 373

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            ++  MI   + F + + +I   ++     I 
Sbjct: 374 EQLVNMIVAQRNFQANSQMISTQDQVTQTIIN 405


>gi|222112272|ref|YP_002554536.1| flagellar basal body flae domain-containing protein [Acidovorax
           ebreus TPSY]
 gi|221731716|gb|ACM34536.1| flagellar basal body FlaE domain protein [Acidovorax ebreus TPSY]
          Length = 531

 Score = 94.9 bits (234), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 70/187 (37%), Gaps = 3/187 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN--DIDQKISFVAS 61
            F  GL+   A  + L  +  N++N++T GF+  + +F+ ++ +             V  
Sbjct: 2   GFQQGLSGLNASAKNLDVIGHNIANSNTTGFKASRTEFAAMIASAIGAASGTNSGIGVEV 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLVSASGK 120
                    G+   TG  LD A+ G+ +F L+ P G    TR G FK+ + G++V+  G 
Sbjct: 62  SAIAQQFNQGNLTVTGNSLDVAINGNGFFTLQMPDGSRAYTRAGNFKLDNVGNVVTNDGA 121

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
             +         +        +          +    +       ++    + + G +P 
Sbjct: 122 QVMGYPIDPVTGLRTSSTAVPLTFPTTAPIPARQTTAIKTAFNLDARTPNAKGDPGATPP 181

Query: 181 IPPTPLE 187
           +  TP  
Sbjct: 182 VAATPRT 188



 Score = 79.1 bits (193), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 48/146 (32%), Gaps = 10/146 (6%)

Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQK-----GKVIATM 158
           G + VT D + V+  G    +   S       +    NV   G I  +      +    +
Sbjct: 384 GSYPVTLDLNKVTQFGTKFAVSELSQDGYTSGELTGINVENNGMIMTRYSNGVTRAEGQI 443

Query: 159 GLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQM 213
            L S   +QG      +                 D +   ++ G LEDSN +   E+  M
Sbjct: 444 ALASFRNTQGLAAVGGNNWVETYESGQPVLGAPTDGNFGALRAGALEDSNVDLTAELVNM 503

Query: 214 IHLTQKFNSITTLIDENEKSMLEAIR 239
           +   + + +    I   ++ M   + 
Sbjct: 504 MTAQRAYQANAQTIKTQDQVMSTLVN 529


>gi|167770210|ref|ZP_02442263.1| hypothetical protein ANACOL_01553 [Anaerotruncus colihominis DSM
           17241]
 gi|167667532|gb|EDS11662.1| hypothetical protein ANACOL_01553 [Anaerotruncus colihominis DSM
           17241]
          Length = 556

 Score = 94.9 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 65/205 (31%), Gaps = 14/205 (6%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ---------- 54
              G+A   + +QR+  + +N++N +T GF++ +V F ++      +             
Sbjct: 1   MYSGVAGMKSHQQRMDVIGNNIANVNTYGFKSSRVTFRDMFYQNIRNASAGTSTRGGVSP 60

Query: 55  --KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVT-D 110
                              S  STG  LD A+ GD +F ++   G    TR G   +   
Sbjct: 61  SGVGYGSQIASIDKLMTQSSMTSTGQPLDCAITGDGFFQVQDSDGNKFYTRAGMLDIDQA 120

Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170
            G LV  +G + +       I     +    V         G  + T+      +S    
Sbjct: 121 TGYLVDLNGYFVLGTQGPDVIGKAPGNSKIKVELDPLEPAAGSKVQTIQNVEYTLSATNY 180

Query: 171 RRENSGISPNIPPTPLEDLSGVTVK 195
               +          +     + V 
Sbjct: 181 TTAGNVNFNFSLDNEMPTGQNIRVV 205



 Score = 77.2 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 41/120 (34%), Gaps = 5/120 (4%)

Query: 125 DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT 184
                 + +       +   + + + K  ++  + L + D  QG  +  NS  +      
Sbjct: 434 GGPQSLMNLTGIAIGADGIIRAQNAGKDIIVGRIDLANFDNPQGLDQAGNSYFTATDNSG 493

Query: 185 PLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             +           +K   LE SN +   E   MI   + F + + LI  ++  + E I 
Sbjct: 494 KAKYAVPGEDGTGALKNSALEMSNVDLSQEFSDMIVTQRGFQANSRLITVSDTMLEELIN 553


>gi|120554033|ref|YP_958384.1| hypothetical protein Maqu_1105 [Marinobacter aquaeolei VT8]
 gi|120323882|gb|ABM18197.1| protein of unknown function DUF1078 domain protein [Marinobacter
           aquaeolei VT8]
          Length = 637

 Score = 94.5 bits (233), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 34/157 (21%), Positives = 62/157 (39%), Gaps = 2/157 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA--IKNDIDQKISFVAS 61
           +FN GL+   A    L    +N++N  TVGF++ KV+F ++  +  +    +     V  
Sbjct: 2   AFNTGLSGLRAASVDLDVTGNNIANASTVGFKSSKVQFGDLYASGFLSAGTNPIGDGVRV 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
                S   G+   T   LD A+ GD +F L +   I  +R G+F +  +G +V+     
Sbjct: 62  QDVKQSFGQGNISFTDNGLDMAISGDGFFILNNGGEIRYSRAGQFGIDKEGYVVNNQNMR 121

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158
                A     +        +       ++   + T 
Sbjct: 122 VQGYTADDDGNLSGIRGDLQIETDNLAPRRTTNLQTD 158



 Score = 75.7 bits (184), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 21/179 (11%), Positives = 50/179 (27%), Gaps = 7/179 (3%)

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125
              +  S    G +   A  GD    +  P             T  G+    + +     
Sbjct: 459 WVPKDPSGDPNGADGPPANPGDVVSPIPEPATSSAFVVNLANTTQYGAAFGVNDQQQNGY 518

Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185
                  +   D+            K   +  + L + + + G     ++          
Sbjct: 519 TTGRLSGLDVSDQGVIFARYTNGQSKS--LGQVALAAFNNTDGLSPVGDTTWVETFESGQ 576

Query: 186 L-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
                 +  +  ++K   +EDSN +   E+  +I   + + +    I+ ++      I 
Sbjct: 577 PVIGAPDTGTLGSIKASSVEDSNVDLSAELVNLIIAQRNYQANAKTIETSDAVTQTIIN 635


>gi|228938885|ref|ZP_04101485.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228971766|ref|ZP_04132387.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228978375|ref|ZP_04138752.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           Bt407]
 gi|228781392|gb|EEM29593.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           Bt407]
 gi|228787856|gb|EEM35814.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228820734|gb|EEM66759.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar berliner ATCC 10792]
          Length = 249

 Score = 94.5 bits (233), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 43/246 (17%), Positives = 81/246 (32%), Gaps = 15/246 (6%)

Query: 11  AQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DIDQKISFVASG 62
             +   QR++  ++N++N  T GF+   +        +          +I      V   
Sbjct: 2   GMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGVVTNIGSVDYAVVPA 61

Query: 63  KEYLSKEVGSFISTGTELDF-----ALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSA 117
             +++   G+   T +  DF     A    ++F         LTRDG F +  D  L ++
Sbjct: 62  ATHVNLVQGNIQMTNSATDFFLDDGAAGTTSFFVTSKNDETFLTRDGSFTLNSDRYLQTS 121

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG--FVRRENS 175
           SG + + +                             IA +   +VD       V+REN 
Sbjct: 122 SGAFVMGENNERIRIPEGAKVAVQADGTLYDEITQNNIARLQTKTVDAETNARLVQRENK 181

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
             +               VK   LE+SN +   EM  ++   +   +   ++   +K   
Sbjct: 182 SFTLAEGNIANLPNGTGIVKNHMLENSNVDMTKEMADLMTDQKMIQASQRVMTSFDKIYE 241

Query: 236 EAIRNI 241
           +    I
Sbjct: 242 KEANEI 247


>gi|220929459|ref|YP_002506368.1| hypothetical protein Ccel_2042 [Clostridium cellulolyticum H10]
 gi|219999787|gb|ACL76388.1| protein of unknown function DUF1078 domain protein [Clostridium
           cellulolyticum H10]
          Length = 454

 Score = 94.5 bits (233), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 64/210 (30%), Gaps = 16/210 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++   A + ++  + +N++N +T+GF+  +V F E+                
Sbjct: 1   MMRSMFSGVSGLKAHQAKMDVIGNNVANVNTLGFKAGRVTFQEIFNQTLRGAGAPDAATA 60

Query: 54  -------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDG 104
                  Q    +A G        GS   T    D ++ GD +F ++         TR G
Sbjct: 61  RGGTNPMQIGLGIAVGSIDNQMTGGSPQRTDNPTDLSISGDGFFIVKGSIADTFKFTRAG 120

Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
            F +   G+LVS  G           +                            + +  
Sbjct: 121 NFGLDKLGNLVSGDGMNVYGWTKYDTLGDGTVKFDTEAEITPINLYSDVTNGNKKIIAAK 180

Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVTV 194
            +       N   +  I   P +     TV
Sbjct: 181 ATSYAEFSGNLNSALPILADPDDSDPQFTV 210



 Score = 89.9 bits (221), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 18/123 (14%), Positives = 40/123 (32%), Gaps = 6/123 (4%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
            +D  +    +        +      + + + +  + L   D   G  +   +   P   
Sbjct: 329 NIDGYTTGNLVTFNIGSDGMLTGVYSNGQQQPLGLIALAGFDNPAGLQKVGGNLFIPTTN 388

Query: 183 ------PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                   P       T+  G LE SN +   E   MI   + F + + +I  +++ + E
Sbjct: 389 SGDFTKGVPAGSQGVGTLSPGTLEMSNVDLSREFTDMIVTQRGFQANSRIITTSDEMLQE 448

Query: 237 AIR 239
            + 
Sbjct: 449 LVN 451


>gi|332703535|ref|ZP_08423623.1| flagellar hook-basal body protein [Desulfovibrio africanus str.
           Walvis Bay]
 gi|332553684|gb|EGJ50728.1| flagellar hook-basal body protein [Desulfovibrio africanus str.
           Walvis Bay]
          Length = 556

 Score = 94.5 bits (233), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 44/235 (18%), Positives = 74/235 (31%), Gaps = 18/235 (7%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA---IKNDIDQKISFVA 60
           S   G+    A   ++  + +N++N  T+GF+  ++ F +V+         I Q    V+
Sbjct: 6   SMFSGVTGLKAHGDKMGVIGNNIANVSTIGFKGARMFFQDVISQDIPTAAGIGQVGRGVS 65

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFAL--ESPRGIILTRDGRFKVTDDGSLVSAS 118
            G  Y     G F +TG   D A+ G  +F +  ++      TR G F+   DG LV  +
Sbjct: 66  IGAIYADYTQGGFETTGEATDLAIGGKGFFIVKKKNEDTSYYTRAGNFRFDKDGYLVDPN 125

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178
           G       A           +        I      I      S       V   ++  S
Sbjct: 126 GLVLQGWRAERSDPTAAVSGVTTNTNTVRIVGTPTDIRLNNFQSPPQETTNVTVISNLDS 185

Query: 179 PN---IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
                   T     +   V  G  E            +      + +   + D N
Sbjct: 186 SEKSRAESTTDPFFAMFEVWDGTQETP----------LTEAQYSYQATVKVFDAN 230



 Score = 76.4 bits (186), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 24/83 (28%), Gaps = 5/83 (6%)

Query: 162 SVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
             +   G  R   +                      ++    +E SN +   E  QMI  
Sbjct: 471 DFNNPWGLRREGGNLFMDTRDSGGAITNQANRGGKGSIASNSIEQSNVDMADEFVQMITT 530

Query: 217 TQKFNSITTLIDENEKSMLEAIR 239
            + F +   +I   +  + E I 
Sbjct: 531 QRGFQANGKVITTVDTLLGEVIN 553


>gi|255323598|ref|ZP_05364728.1| flagellar hook protein FlgE [Campylobacter showae RM3277]
 gi|255299312|gb|EET78599.1| flagellar hook protein FlgE [Campylobacter showae RM3277]
          Length = 756

 Score = 94.5 bits (233), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 61/189 (32%), Gaps = 18/189 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50
           M  S   G+    A +  +    +N++N +TVG++  +  F +++               
Sbjct: 1   MMRSLWSGVTGLQAHQIAMDVEGNNIANVNTVGYKYNRANFDDLIYQTSRIATAPQNQHG 60

Query: 51  --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106
             +  +              + GS  +T  + D AL+GD +F + S   +    TR+G F
Sbjct: 61  GVNNMEVGLGTQINSTTRIFKQGSLQTTDKQTDIALQGDGFFMVSSDGGKTTYYTRNGDF 120

Query: 107 KVTDDGSLVSASGKYPVLD----MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162
               +G+ V   G                      +I         ++    IA  G   
Sbjct: 121 SRDSEGNFVDNGGNIVQGWMRDEETGEIDPTRPIGDIKIPVGLTVPARATTNIALKGNLD 180

Query: 163 VDMSQGFVR 171
                G  +
Sbjct: 181 SGNDVGNKK 189



 Score = 71.8 bits (174), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 15/129 (11%), Positives = 42/129 (32%), Gaps = 5/129 (3%)

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
           ++S      D  +       + +          + +   +A +G+     +QG      +
Sbjct: 626 NSSTADISQDGYASGELNGIRIDQSGTLVGSFTNGRSLGLAQVGVAKFANNQGLAGEGGN 685

Query: 176 GISPNIPPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
             S             +      +    LE SN +    + Q+I + + F + +  I  +
Sbjct: 686 LFSRTANSGDPIIGAAQTAGRGKISASSLEMSNVDLSRSLTQLIVVQRGFQANSKTITTS 745

Query: 231 EKSMLEAIR 239
           ++ +   ++
Sbjct: 746 DEMLNTLLQ 754


>gi|78776233|ref|YP_392548.1| flagellar hook protein FlgE [Sulfurimonas denitrificans DSM 1251]
 gi|78496773|gb|ABB43313.1| Flagellar hook FlgE [Sulfurimonas denitrificans DSM 1251]
          Length = 718

 Score = 94.5 bits (233), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 61/189 (32%), Gaps = 14/189 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G++   + +  +   ++N++N +TVG++  +  FS+++               
Sbjct: 1   MLKSLFAGVSGLQSHQVAMDVESNNIANVNTVGYKYSRANFSDLLAQTRAIATAPQGELG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGRF 106
             +  Q                GS  ++    D A++GD +F +    G     TR G F
Sbjct: 61  GKNPVQVGLGATVSSMTRIFSQGSVQNSDKNTDVAIQGDGFFIISPDGGNTYKYTRAGDF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           K    G+ V  +G      +                                 +   +++
Sbjct: 121 KFDAGGNFVDNNGFIVQGWLRDRATGFVDATAPITNINIPPGLTTPASPTQHVVIKANLN 180

Query: 167 QGFVRRENS 175
            G + +  S
Sbjct: 181 SGPLVKTYS 189



 Score = 67.6 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 13/120 (10%), Positives = 39/120 (32%), Gaps = 5/120 (4%)

Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183
            D  +    +  + +          + +   +A +G+     ++G      +        
Sbjct: 595 QDGFTGGDLVGIRIDQSGTLIGSFSNGRSFGLAQIGMAKFTNNEGLSTEGGNVYVQTANS 654

Query: 184 TPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
                 +  T     ++   LE SN +    + Q+I + + + +    I  +++ +   I
Sbjct: 655 GDPIIGTAATAGRGFMQAAALEASNVDLSLALTQLIIIQRGYQANGKTITTSDQLLQTLI 714


>gi|21231397|ref|NP_637314.1| flagellar hook protein FlgE [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66768550|ref|YP_243312.1| flagellar hook protein FlgE [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|188991641|ref|YP_001903651.1| flagellar hook protein FlgE [Xanthomonas campestris pv. campestris
           str. B100]
 gi|21113063|gb|AAM41238.1| flagellar biosynthesis, hook protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66573882|gb|AAY49292.1| flagellar biosynthesis, hook protein [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|167733401|emb|CAP51602.1| unnamed protein product [Xanthomonas campestris pv. campestris]
          Length = 407

 Score = 94.5 bits (233), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 59/128 (46%), Gaps = 2/128 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--ISFVAS 61
           +FN  L+   A    L+  ++N++N +T GF+  + +F+++  +    + +    S V  
Sbjct: 2   AFNTSLSGINAANADLNVTSNNIANVNTTGFKESRAEFADMFQSTSYGLSRNAVGSGVRV 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
                    G+   TG  LD A+ G+ +FA+ S    + TR G F+   +G +++  G  
Sbjct: 62  SNVAQQFSQGNIDPTGRSLDLAISGEGFFAVSSNGAKMYTRAGNFQTDANGYVINPQGAR 121

Query: 122 PVLDMASV 129
             +   + 
Sbjct: 122 LQVFAPNP 129



 Score = 74.5 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 14/90 (15%), Positives = 32/90 (35%), Gaps = 5/90 (5%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYE 209
           +  + L S    QG   + N+  + +         +        ++ G LE S  +   +
Sbjct: 316 LGQVALNSFVNPQGLQSQGNNMWAESYTSGAARVGAPDTSDLGQIESGSLEASTVDLTEQ 375

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +  MI   + F + + +I   ++     I 
Sbjct: 376 LVNMIVAQRNFQANSQMISTQDQVTQTIIN 405


>gi|77359722|ref|YP_339297.1| flagellar hook protein FlgE [Pseudoalteromonas haloplanktis TAC125]
 gi|76874633|emb|CAI85854.1| flagellar biosynthesis; hook protein [Pseudoalteromonas
           haloplanktis TAC125]
          Length = 454

 Score = 94.5 bits (233), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/167 (23%), Positives = 66/167 (39%), Gaps = 5/167 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61
           SFNI L+   A ++ L+  A+N++N +T GF+  + +F++V  +    +   +    V +
Sbjct: 2   SFNIALSGLAAAQKDLNVTANNIANVNTTGFKESRAEFADVYASSVFSSGKTKNGDGVQT 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESP---RGIILTRDGRFKVTDDGSLVSAS 118
                    GS   T   LD A+ G+ +FA       +    TR G FK+  D  +V A+
Sbjct: 62  TMVAQQFHQGSLQFTNNSLDLAITGEGYFATSQDLGAQDFTYTRAGAFKLNKDNFVVDAN 121

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           G +                 +            G   AT  +YS   
Sbjct: 122 GSFLQGFPVDPSTGDTTSVSLSTSSALQIPDSSGSPRATSSVYSSFN 168



 Score = 68.7 bits (166), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 33/98 (33%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLED 201
             +     +  + +     SQG  +  ++G   +I           +     +    LE 
Sbjct: 355 YSNGDSTFLGQVAMVRFSNSQGLQQVGSTGWKASIASGEPIAGEPGSGTLGNINSSALEQ 414

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN N   E+  +I   + F + +  ++ N       ++
Sbjct: 415 SNVNLTNELVDLISAQRNFQANSRALEVNSTIQQSILQ 452


>gi|21242727|ref|NP_642309.1| flagellar hook protein FlgE [Xanthomonas axonopodis pv. citri str.
           306]
 gi|294625274|ref|ZP_06703913.1| flagellar biosynthesis hook protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|294664591|ref|ZP_06729932.1| flagellar biosynthesis hook protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|325927875|ref|ZP_08189099.1| flagellar hook protein FlgE [Xanthomonas perforans 91-118]
 gi|21108203|gb|AAM36845.1| flagellar biosynthesis hook protein [Xanthomonas axonopodis pv.
           citri str. 306]
 gi|292600448|gb|EFF44546.1| flagellar biosynthesis hook protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292605648|gb|EFF48958.1| flagellar biosynthesis hook protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|325541715|gb|EGD13233.1| flagellar hook protein FlgE [Xanthomonas perforans 91-118]
          Length = 407

 Score = 94.2 bits (232), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 57/128 (44%), Gaps = 2/128 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--ISFVAS 61
            FN  L+   A    L+  ++N++N +T GF+  + +F+++  +    + +    S V  
Sbjct: 2   GFNTSLSGINAANADLNVTSNNIANVNTTGFKESRAEFADMFQSTSYGLSRNAVGSGVRV 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
                    G+   TG  LD A+ G+ +F + S    + TR G F+   +G +V+  G  
Sbjct: 62  SNVAQQFSQGNIDPTGRSLDLAVSGEGFFTVSSNGAKMYTRAGNFQTDANGYVVNPQGAR 121

Query: 122 PVLDMASV 129
             +   + 
Sbjct: 122 LQVFAPNP 129



 Score = 74.5 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 33/92 (35%), Gaps = 5/92 (5%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSM 207
           K +  + L S    QG   + N+  + +         +        ++ G LE S  +  
Sbjct: 314 KPLGQVALSSFVNPQGLQSQGNNMWAESYTSGAARTGAPDTSDLGQIESGSLEASTVDLT 373

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            ++  MI   + F + + +I   ++     I 
Sbjct: 374 EQLVNMIVAQRNFQANSQMISTQDQVTQTIIN 405


>gi|153951692|ref|YP_001399003.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. doylei
           269.97]
 gi|152939138|gb|ABS43879.1| flagellar hook protein [Campylobacter jejuni subsp. doylei 269.97]
          Length = 875

 Score = 94.2 bits (232), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 57/183 (31%), Gaps = 14/183 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G++   A +  +    +N+SN +T GF+  +  F  +                
Sbjct: 1   MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATTPTDGRG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106
             +  Q    V+          GS   T    D A+ GD +F +         LTR G F
Sbjct: 61  GQNPLQIGLGVSVSSTTRIHSQGSVQITDKNTDVAINGDGFFMVSDDGGLTNYLTRSGDF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           K+   G+ V+ +G        +   Q                       +T      +++
Sbjct: 121 KLDAYGNFVNNAGFVVQGWNINWDTQSIDSSRTPQNIFIDPGMHIPAAQSTEVAIKANLN 180

Query: 167 QGF 169
            G 
Sbjct: 181 SGL 183



 Score = 72.2 bits (175), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 18/144 (12%), Positives = 46/144 (31%), Gaps = 5/144 (3%)

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           T      +    S  + +G+      +        + +          + K   +A M +
Sbjct: 729 TSGSNDGLVSSNSASTLTGQATDGYPSGNLKPEGIRVDDKGNILGEFTNGKTFAVAKMAM 788

Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIH 215
            SV  + G      +          +      T     +K   LE SN +    + ++I 
Sbjct: 789 ASVANNSGLEEIGGNLFKVTANSGNIVVGEAGTGGRGEMKTAALEMSNVDLSRSLTELII 848

Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239
           + + + + +  I  +++ +   I+
Sbjct: 849 IQRGYQANSKTISTSDQMLQTLIQ 872


>gi|118444200|ref|YP_877983.1| flagellar basal-body rod protein FlgG [Clostridium novyi NT]
 gi|118134656|gb|ABK61700.1| flagellar basal-body rod protein FlgG [Clostridium novyi NT]
          Length = 485

 Score = 94.2 bits (232), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 55/166 (33%), Gaps = 35/166 (21%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50
           M  S   G++     + +L    +N++N  T GF++ +V+F +++               
Sbjct: 1   MLRSMYAGISGMKVNQTKLDVTGNNIANVSTTGFKSSRVRFKDMLSQNMGEAVGPGRNQG 60

Query: 51  --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP------------- 95
             +  Q    V           G    T   LD A++G  +F +                
Sbjct: 61  GVNGKQVGLGVQVAGIDTVMSQGMMQPTSRNLDVAMDGTGYFIVAKGALPESNAGGIAVS 120

Query: 96  ----------RGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPI 131
                       +  TRDG F +   G+L+++ G   +    +   
Sbjct: 121 ESEHTMSGGAFQVNYTRDGSFTLDHQGNLLTSDGYRVMGYAINEKD 166



 Score = 75.7 bits (184), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 30/98 (30%), Gaps = 13/98 (13%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPL-------------EDLSGVTVKRGFLED 201
           +  +   S    +G  +   +  S                            + +G LE 
Sbjct: 385 LGQIATASFKNQEGLKKEGKNLYSNTANSGVPTVRSGLGTPKNLDNGDGYGEMLQGMLEM 444

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   +   MI  T+ F +   +I   ++ + + I 
Sbjct: 445 SNVDLAEQFTDMIVTTRAFQASGKMISTGDEILQDIIN 482


>gi|332140546|ref|YP_004426284.1| flagellar hook protein FlgE [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327550568|gb|AEA97286.1| flagellar hook protein FlgE [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 461

 Score = 94.2 bits (232), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 68/170 (40%), Gaps = 5/170 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61
           SFNI L+   A ++ L   A+N++N +TVGF+  + +F +V  A        +    V +
Sbjct: 2   SFNIALSGVSAAQKDLDVTANNIANVNTVGFKESRAEFGDVYAASLLAGGKTKVGDGVLT 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII---LTRDGRFKVTDDGSLVSAS 118
            +       GS   T T LD A+ G+ +FA            TR G+FK+  D  +V+++
Sbjct: 62  QEVAQQFSQGSLQFTNTSLDLAITGNGFFATVPEITSRDFSFTRAGQFKLDSDNFVVNSN 121

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
           G   +    +                +   S       +     +++  G
Sbjct: 122 GDNLLGFPVNADGTSASVALSTTEPVRIPDSSGSPQQTSEVDIRMNLPAG 171



 Score = 63.0 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 15/93 (16%), Positives = 30/93 (32%), Gaps = 5/93 (5%)

Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANS 206
            + I  + L      QG  +  ++    +I           T     +    LE +N N 
Sbjct: 367 SEPIVRVALVRFSNEQGLTQESSTQWKESILSGEALAGEATTGTFGEINSSALEQANVNL 426

Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             E+  MI   + F + +  ++ N       + 
Sbjct: 427 TTELIDMIIAQRNFQANSRALEVNNSLNQTILN 459


>gi|228964756|ref|ZP_04125863.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|228795006|gb|EEM42505.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis
           serovar sotto str. T04001]
          Length = 249

 Score = 94.2 bits (232), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 43/246 (17%), Positives = 81/246 (32%), Gaps = 15/246 (6%)

Query: 11  AQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DIDQKISFVASG 62
             +   QR++  ++N++N  T GF+   +        +          +I      V   
Sbjct: 2   GMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIGSVDYAVVPA 61

Query: 63  KEYLSKEVGSFISTGTELDF-----ALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSA 117
             +++   G+   T +  DF     A    ++F         LTRDG F +  D  L ++
Sbjct: 62  ATHVNLVQGNIQMTNSATDFFLDDGAAGTTSFFVTSKNDETFLTRDGSFTLNSDRYLQTS 121

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG--FVRRENS 175
           SG + + +                             IA +   +VD       V+REN 
Sbjct: 122 SGAFVMGENNERIRIPEGAKVAVQADGTLYDEVTQNNIARLQTKTVDAETNARLVQRENK 181

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
             +               VK   LE+SN +   EM  ++   +   +   ++   +K   
Sbjct: 182 SFTLAEGNIANLPNGTGIVKNHMLENSNVDMTKEMADLMTDQKMIQASQRVMTSFDKIYE 241

Query: 236 EAIRNI 241
           +    I
Sbjct: 242 KEANEI 247


>gi|51246516|ref|YP_066400.1| flagellar hook protein (FlgE) [Desulfotalea psychrophila LSv54]
 gi|50877553|emb|CAG37393.1| related to flagellar hook protein (FlgE) [Desulfotalea psychrophila
           LSv54]
          Length = 566

 Score = 94.2 bits (232), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 75/190 (39%), Gaps = 5/190 (2%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI---KNDIDQKISFV 59
           ++   G++      Q ++ + +N++NT+T+ ++  +  FS+++ +         Q    V
Sbjct: 5   SALYTGVSGLNTNGQAMTVIGNNLANTNTIAYKGSRTMFSDLLSSSVTGSGGTSQVGRGV 64

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRFKVTDDGSLVSA 117
              +       G+F ST + LD A+EG+++F L     + I  +R G FK  + G LV+ 
Sbjct: 65  GLSRVDNDFSQGTFESTSSGLDLAIEGNSFFLLSPSNDQSIHYSRAGSFKFNEGGYLVNP 124

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177
            G            ++   D      +   + +       +   ++D +      +    
Sbjct: 125 GGLRVQGIAYGADGELAGGDPSDIFLDGAGMIKGAATSEMIMNTNLDSNAKIFPIDFDAS 184

Query: 178 SPNIPPTPLE 187
           + N      E
Sbjct: 185 NTNSYNFSEE 194



 Score = 81.5 bits (199), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 63/219 (28%), Gaps = 15/219 (6%)

Query: 32  VGFRTIKVKFSEVVGAIKND----IDQKISFVASGKEYLSKEVGSFISTGTELD---FAL 84
             FR       +   +++ +    I    + ++  +     E     S G  LD    A 
Sbjct: 349 TYFRKTDDNTWDTYYSLEKEDGSVIPADPNAISLTQLRFGSEGQPVDSAGLPLDGPPTAT 408

Query: 85  EGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE 144
             +            +T        +  S V +  +          + I +   +     
Sbjct: 409 TEEPIDWGNGSEPTPITVTFDTTQFNSSSKVISQEQNGYGAGNLSGVNIDEGGNVIAAYS 468

Query: 145 KGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL----SGVTVKRGFLE 200
            G+     + IA + L       G     N+  +                   V    LE
Sbjct: 469 NGK----NRNIAAISLAKFQNPAGLTMEGNNLFAATGTSGAPRVGLPGPELGKVFTNSLE 524

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            SN +   E  +MI + + + + + +I   ++ + E I 
Sbjct: 525 QSNVDMSVEFVRMITIQRGYQANSKIITTVDELLGELIN 563


>gi|206896555|ref|YP_002246691.1| flagellar hook protein FlgE [Coprothermobacter proteolyticus DSM
           5265]
 gi|206739172|gb|ACI18250.1| flagellar hook protein FlgE [Coprothermobacter proteolyticus DSM
           5265]
          Length = 519

 Score = 94.2 bits (232), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 58/144 (40%), Gaps = 12/144 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV------------GAI 48
           M  SF  G++     + R+  +++N++N +T  ++  +  FS+VV            G  
Sbjct: 1   MLRSFFNGISGLKVHQIRIDVISNNIANVNTTAYKAARATFSDVVALTLKGARAPYGGRG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
             +  Q    V           G   +T    D A++GD +F +   +    TRDG F +
Sbjct: 61  GTNPSQVGLGVGLATIDNIMTQGPTNNTNRASDLAIQGDGFFVVSDGQRNWFTRDGAFDI 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQ 132
              G L+  S    V   + +P Q
Sbjct: 121 DLTGRLIQLSTGLKVQGWSMIPTQ 144



 Score = 78.4 bits (191), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 54/189 (28%), Gaps = 4/189 (2%)

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113
                 AS  +Y+         +  + D    G        P     TR      +    
Sbjct: 327 TVSMESASPVQYVVTFDSDGRISDVKKDGQSYGTTPTIDFDPGNGAQTRQITLNFSAITQ 386

Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRE 173
             + S    ++D       +               + + + +A + L +     G  R  
Sbjct: 387 YAADSRVVGLVDGNVNGKLLSWFVTDEGKVMGEFDNGQIRELAQIALANFQNPAGLSREG 446

Query: 174 NSGISPNIP----PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           N+                   G  + RG LE SN +   E   +I   + F + T +I  
Sbjct: 447 NNLWQNTANSGFRGYVEAGDLGSLIIRGALESSNVDLAEEFTNLIITQRGFQASTRVITT 506

Query: 230 NEKSMLEAI 238
           +++   + I
Sbjct: 507 SDEVTQDII 515


>gi|218778868|ref|YP_002430186.1| hypothetical protein Dalk_1015 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218760252|gb|ACL02718.1| Flagellar hook protein FlgE [Desulfatibacillum alkenivorans AK-01]
          Length = 693

 Score = 94.2 bits (232), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 63/172 (36%), Gaps = 6/172 (3%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA---IKNDIDQKISFV 59
           ++   G++    L   ++ + DN++N  TVGF++ +V F +V+      ++   Q     
Sbjct: 5   SALFSGISGMNTLGNSMTVIGDNIANVSTVGFKSSRVTFQDVLAQTVSTQSGTGQLGRGA 64

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG---IILTRDGRFKVTDDGSLVS 116
           A G        GS  ST +  D A+ G+ +F +  P        TR G F+  +DG+ V+
Sbjct: 65  AMGDITGIFSQGSLESTDSATDLAIGGEGFFVVRDPENVNLEYFTRAGEFRFDEDGNFVN 124

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
            SG                      +       +    +  +     D    
Sbjct: 125 PSGYLVRGWTLDQKGNEEGSIGDIILNSFTSPPEATDKVTLITNLDSDGEDN 176



 Score = 78.0 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/198 (13%), Positives = 49/198 (24%), Gaps = 9/198 (4%)

Query: 42  SEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101
           ++   A+  D    IS         S            L  A +G AW           +
Sbjct: 502 ADNWTALNPDNSSHISSDGYFYINPSFAEDLTSPMELNLGMAYDGTAWVQESLSTTQYAS 561

Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLY 161
                     G  V       V     +                       + +  MG  
Sbjct: 562 AGNTTYQATTGYGVGDLDGISVSSDGVITGSYSNGQIKPLFRIALAKFNNVQGLQKMGQN 621

Query: 162 SVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221
               ++       +    N            T+    LE SN +   E  +MI   + + 
Sbjct: 622 MFAATRNSGDAITNKPGTN---------GLGTITSNSLEQSNVDLANEFVKMITTQRGYQ 672

Query: 222 SITTLIDENEKSMLEAIR 239
           + + +I   ++ + E I 
Sbjct: 673 ANSKVITVTDQLLQEVIN 690


>gi|325921024|ref|ZP_08182906.1| flagellar hook protein FlgE [Xanthomonas gardneri ATCC 19865]
 gi|325548506|gb|EGD19478.1| flagellar hook protein FlgE [Xanthomonas gardneri ATCC 19865]
          Length = 407

 Score = 94.2 bits (232), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 59/128 (46%), Gaps = 2/128 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--ISFVAS 61
           +FN  L+   A    L+  ++N++N +T GF+  + +F+++  +    + +    S V  
Sbjct: 2   AFNTSLSGINAANADLNVTSNNIANVNTTGFKESRAEFADMFQSTSYGLSRNAVGSGVRV 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
                    G+   TG  LD A+ G+ +FA+ S    + TR G F+   +G +++  G  
Sbjct: 62  SNVAQQFSQGNIDPTGRSLDLAISGEGFFAVSSNGAKMYTRAGNFQTDANGYVINPQGAR 121

Query: 122 PVLDMASV 129
             +   + 
Sbjct: 122 LQVFAPNP 129



 Score = 74.1 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 14/90 (15%), Positives = 32/90 (35%), Gaps = 5/90 (5%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYE 209
           +  + L S    QG   + N+  + +         +        ++ G LE S  +   +
Sbjct: 316 LGQVALSSFVNPQGLQSQGNNMWAESYTSGAARIGAPDTSDLGQIESGSLEASTVDLTEQ 375

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +  MI   + F + + +I   ++     I 
Sbjct: 376 LVNMIVAQRNFQANSQMISTQDQVTQTIIN 405


>gi|256830199|ref|YP_003158927.1| hypothetical protein Dbac_2432 [Desulfomicrobium baculatum DSM
           4028]
 gi|256579375|gb|ACU90511.1| protein of unknown function DUF1078 domain protein
           [Desulfomicrobium baculatum DSM 4028]
          Length = 562

 Score = 94.2 bits (232), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 5/170 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA---IKNDIDQKISFVA 60
           S   G +   A  + ++ + +N+SN  T+GF+  ++ F + +       +   Q    V+
Sbjct: 6   SLYSGTSGLKAHGEDMTVIGNNISNVSTIGFKGSRMYFEDALSQQITTASGSGQVGRGVS 65

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI--ILTRDGRFKVTDDGSLVSAS 118
            G        GS  ST    D A+ G+ +F +          TR G F+  ++G LV   
Sbjct: 66  VGTVMGDFSQGSLESTTEATDLAIGGNGFFMVSPAGQEVNYYTRAGNFRFDEEGYLVDPR 125

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
           G                            +   G              Q 
Sbjct: 126 GYRLQGWEVQQANTSAAASGDTTAQATTGVQILGVPQDVKLENFQSPPQA 175



 Score = 71.8 bits (174), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 28/83 (33%), Gaps = 5/83 (6%)

Query: 162 SVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
           + + +    R   +  S      P            ++    LE SN +   E  +MI  
Sbjct: 477 TFNNNYALYREGGNLFSETRSSGPPITGLANTGGKGSIASNSLEQSNVDLATEFVKMITT 536

Query: 217 TQKFNSITTLIDENEKSMLEAIR 239
            + F + +  I   ++ +   I+
Sbjct: 537 EKGFQANSKTITTVDQMLTVLIQ 559


>gi|218885350|ref|YP_002434671.1| hypothetical protein DvMF_0246 [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218756304|gb|ACL07203.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           vulgaris str. 'Miyazaki F']
          Length = 545

 Score = 94.2 bits (232), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 30/128 (23%), Positives = 56/128 (43%), Gaps = 5/128 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA---IKNDIDQKISFVA 60
           S   G++  LA  ++++ + +N++N +TVGF+  ++ F + +         + Q    V+
Sbjct: 6   SMWTGVSGLLAHGEKMNVLGNNIANVNTVGFKGSRMDFQDFINQDVYSAVGVSQVGRGVS 65

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI--ILTRDGRFKVTDDGSLVSAS 118
            G  +     G+F +T    D A+ G  +F +          TR G F+  +DG LV   
Sbjct: 66  IGAIFGDFSQGAFETTNEATDLAIGGKGFFQVRPKGQETSYYTRAGNFRFDNDGYLVDPH 125

Query: 119 GKYPVLDM 126
           G       
Sbjct: 126 GYVLQGWE 133



 Score = 81.8 bits (200), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 33/245 (13%), Positives = 62/245 (25%), Gaps = 22/245 (8%)

Query: 6   NIGLAAQLALEQRLS-----TVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
               +      + ++     T ++N       G+      F      + N      +   
Sbjct: 309 FTIASGATGNLKDMNNWVPTTFSNN-------GY----PLFVANFSGVANASYTSPTVPT 357

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
             + YL +      +       A    A     +     L   G  + T   S   +S  
Sbjct: 358 EAEPYLMELNFGLRNLSNSWGSAPASAAAIGSNAGNLGGLGAQGERQSTAMTSYGGSSSM 417

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-IATMGLYSVDMSQGFVRRENSGISP 179
                       +       +    G  S    + +  + LY         R   +  S 
Sbjct: 418 IFQKQDGYTFGFLQNITVDQDGVVHGRYSNGVILDLYQITLYDFTSPTNLRREGGNLFSE 477

Query: 180 N-----IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
                     P       +V    LE SN +   E  QMI   + F S + +I   +  +
Sbjct: 478 TRASGDALAGPANANGYGSVNSNSLEQSNVDLAREFVQMITTQRGFQSNSKVITTTDTML 537

Query: 235 LEAIR 239
              + 
Sbjct: 538 ETVVN 542


>gi|254473478|ref|ZP_05086875.1| flagellar hook protein FlgE [Pseudovibrio sp. JE062]
 gi|211957594|gb|EEA92797.1| flagellar hook protein FlgE [Pseudovibrio sp. JE062]
          Length = 397

 Score = 94.2 bits (232), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 43/202 (21%), Positives = 81/202 (40%), Gaps = 4/202 (1%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
            N  ++   A   +LSTVADN+SN +TVG++  K  FS +VG+       +   V +   
Sbjct: 7   MNTSVSGMNAQSNKLSTVADNISNANTVGYKRYKTAFSSLVGS-GGTSGHESGIVNTTVV 65

Query: 65  YLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYPV 123
              ++ G+F  T    D A+ G  +F ++  +     TR G F +  +G +V++ G Y +
Sbjct: 66  QTVRQQGAFNFTSRGTDLAINGKGFFQVQDSQGSTYYTRAGDFVLDKNGQMVNS-GGYKL 124

Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183
           L     P+ +     ++    +GE+         +   +      F  + +         
Sbjct: 125 LSAGGAPVTVDLNTPVWQASSEGELGVNLASSTPVRTGAPSYPGNFDYKTSVSAYDQNGN 184

Query: 184 TPLEDLSGVTVKRGFLEDSNAN 205
               DL    + +     S  +
Sbjct: 185 VVKIDLVYSKIGQNMT-GSTVD 205



 Score = 81.8 bits (200), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 25/210 (11%), Positives = 64/210 (30%), Gaps = 11/210 (5%)

Query: 43  EVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT- 101
           ++V +         +   S  +  +    +       +D   +GD      SP  +  T 
Sbjct: 189 DLVYSKIGQNMTGSTVDDSTWKVQAYNQDTPPVELANVDLVFDGDGTLQTGSPDELAFTV 248

Query: 102 RDGRFKVTDDGSLVSASG----KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157
            +G     D    V+A          +D          + E              K++  
Sbjct: 249 PNGETLTLDLSKTVTAGDKFSVNKVDVDGYGPSTIKTIRIEADGRVFGVYEGSAEKLLDQ 308

Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQ 212
           + + +     G   +  +  +                   ++  G +E SN +   E+ +
Sbjct: 309 IQIVNFSNPDGLQAKSGNVYAATDASGDPAVGFPGDNGFGSLYSGAVEGSNVDLAAELTE 368

Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           M+   + +++ T + + + + + E   N+ 
Sbjct: 369 MVQAQRTYSANTKVFNASSELLQEL-NNLR 397


>gi|188576756|ref|YP_001913685.1| flagellar hook protein FlgE [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188576947|ref|YP_001913876.1| flagellar hook protein FlgE [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188521208|gb|ACD59153.1| flagellar biosynthesis hook protein [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|188521399|gb|ACD59344.1| flagellar biosynthesis hook protein [Xanthomonas oryzae pv. oryzae
           PXO99A]
          Length = 407

 Score = 94.2 bits (232), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 58/128 (45%), Gaps = 2/128 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--ISFVAS 61
           +FN  L+   A    L+  ++N++N +T GF+  + +F+++  +    + +    S V  
Sbjct: 2   AFNTSLSGISAANADLNVTSNNIANVNTTGFKESRAEFADMFQSTSYGLSRNAVGSGVRV 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
                    G+   TG  LD A+ G+ +F + S    + TR G F+   +G +V+  G  
Sbjct: 62  SNVAQQFSQGNIDPTGRSLDLAVSGEGFFTVSSNGAKMYTRAGNFQTDANGYVVNPQGAR 121

Query: 122 PVLDMASV 129
             +   + 
Sbjct: 122 LQVFAPNP 129



 Score = 73.7 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 33/92 (35%), Gaps = 5/92 (5%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSNANSM 207
           K +  + L S    QG   + N+  + +        +         ++ G LE S  +  
Sbjct: 314 KPLGQVALSSFVNPQGLQSQGNNVWAESYTSGAARTSAPNTSDLGQIESGSLESSTVDLT 373

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            ++  MI   + F + + +I   ++     I 
Sbjct: 374 EQLVNMIVAQRNFQANSQMISTQDQVTQTIIN 405


>gi|163783988|ref|ZP_02178953.1| flagellar hook protein FlgE [Hydrogenivirga sp. 128-5-R1-1]
 gi|159880748|gb|EDP74287.1| flagellar hook protein FlgE [Hydrogenivirga sp. 128-5-R1-1]
          Length = 327

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 71/188 (37%), Gaps = 8/188 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  SF  G A   A ++ LS ++DN++N +T+GF+  +  F +++ +             
Sbjct: 1   MIQSFYTGNAGLNANQKWLSVISDNIANVNTIGFKAERANFEDLIASSITSFANNAPKNM 60

Query: 56  --ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDG 112
                   G        G+  +T    D AL+G+ +F ++  +G    TR G+F+   +G
Sbjct: 61  EIGGGSFIGSTTKDFSQGALKNTNIATDLALDGEGFFMVQDKQGVTYYTRAGQFRTDANG 120

Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172
            L++ +G Y           I       N+    +     K+           S    + 
Sbjct: 121 DLINLNGMYLQGWSLDANGNISGSIGKINIPNAMDPHVTSKLALKSPTNLNASSPLITKT 180

Query: 173 ENSGISPN 180
            ++  +  
Sbjct: 181 LDTSDATT 188


>gi|332994162|gb|AEF04217.1| flagellar hook protein FlgE [Alteromonas sp. SN2]
          Length = 458

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/184 (21%), Positives = 71/184 (38%), Gaps = 5/184 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61
           SFNI L+   A ++ L   A+N++N +TVGF+  + +F +V           +    V +
Sbjct: 2   SFNIALSGVAAAQKDLDVTANNIANVNTVGFKESRAEFGDVYATSLLAGSKTKVGDGVLT 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII---LTRDGRFKVTDDGSLVSAS 118
                    GS   T T LD A+ G+ +FA            TR G+FK+ DD  +V+++
Sbjct: 62  QDVAQQFSQGSLQFTNTALDLAITGNGFFATVPDETSRDFSFTRAGQFKLDDDNYVVNSN 121

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178
           G   +    +                +   S       +     +++  G    + +   
Sbjct: 122 GDLLLGFPVNSDSTSSSVALSTTEPVQIPDSSGSPAQTSEVDIRMNLPAGDQGLDPAAFD 181

Query: 179 PNIP 182
           P  P
Sbjct: 182 PQDP 185



 Score = 64.1 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 15/93 (16%), Positives = 31/93 (33%), Gaps = 5/93 (5%)

Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANS 206
            + I  + L      QG  ++ ++    +I           T     +    LE +N N 
Sbjct: 364 SEPIVRVALVRFANEQGLTQQSSTEWKESILSGEALAGEATTGTFGEINSSALEQANVNL 423

Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             E+  MI   + F + +  ++ N       + 
Sbjct: 424 TTELIDMIIAQRNFQANSRALEVNNSLNQTILN 456


>gi|152985192|ref|YP_001349650.1| flagellar hook protein FlgE [Pseudomonas aeruginosa PA7]
 gi|150960350|gb|ABR82375.1| flagellar hook protein [Pseudomonas aeruginosa PA7]
          Length = 462

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 35/134 (26%), Positives = 59/134 (44%), Gaps = 2/134 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61
           SFNIGL+   A    L+   +N++N  TVGF+  + +F++V  A    +  + + S V  
Sbjct: 2   SFNIGLSGIQAASSGLNVTGNNIANAGTVGFKQSRAEFADVYAASVLGSGSNPQGSGVLL 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
                  + G+F +T + LD A+ G+ +F   +   I  TR G F       +V  +G  
Sbjct: 62  SDISQMFKQGNFETTNSVLDLAINGNGFFVTSNNGAISYTRAGYFNTDKQDFIVDNNGYR 121

Query: 122 PVLDMASVPIQIPQ 135
                     Q+  
Sbjct: 122 LQGYAVGPNGQLQN 135



 Score = 73.0 bits (177), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 30/98 (30%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLED 201
             + + KV   + L +    QG      +    +         +        ++ G LE 
Sbjct: 363 YTNGQSKVQGQVVLANFANIQGLTPIGKTSWVQSSESGEPAVGAPRSGTLGALQSGALEA 422

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E+  +I   + + +    I   +      I 
Sbjct: 423 SNVDISSELVNLIVHQRNYQANAKTIQTEDAVTQTIIN 460


>gi|90021855|ref|YP_527682.1| ribonuclease III [Saccharophagus degradans 2-40]
 gi|89951455|gb|ABD81470.1| flagellar basal body FlaE [Saccharophagus degradans 2-40]
          Length = 804

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 59/153 (38%), Gaps = 2/153 (1%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASG 62
           F+  L+   A    LS   +N++N  T GF+  + +F +V         ++   S V   
Sbjct: 3   FDTALSGIRAASSDLSVTGNNIANASTTGFKASRAEFGDVYATSVLGAGVNAIGSGVQVQ 62

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
           +       G+   T  ELD A+ G+ +F +      + TR G F + D+G +V+ +G   
Sbjct: 63  EVAQRFSQGNVGFTENELDLAINGNGFFVVSQQGETLYTRAGSFGLDDEGYVVNNTGAVL 122

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI 155
               A     I        +       ++   +
Sbjct: 123 QGFSADGAGNIGGIQGDIRIQTSNLAPRQTTGV 155



 Score = 74.5 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 14/90 (15%), Positives = 30/90 (33%), Gaps = 5/90 (5%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYE 209
           +  + L      QG     N+  +           +  +     V+ G LE+SN +   +
Sbjct: 713 LGQVVLADFSNQQGLQPTGNTMWAETFESGSPNVGTPGSAALGAVQAGALEESNVDLSEQ 772

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +  +I   + F +    I+  +      I 
Sbjct: 773 LVNLIIAQRNFQASAKTIETADAVTQTIIN 802


>gi|311070150|ref|YP_003975073.1| flagellar basal body rod protein FlgG [Bacillus atrophaeus 1942]
 gi|310870667|gb|ADP34142.1| flagellar basal body rod protein FlgG [Bacillus atrophaeus 1942]
          Length = 274

 Score = 93.8 bits (231), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 51/275 (18%), Positives = 100/275 (36%), Gaps = 34/275 (12%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  S          L+Q++ T++ N+SN+ T G++     FSE+V    + +D+K   VA
Sbjct: 1   MLRSMLTASTTLNQLQQQIDTISSNLSNSSTTGYKAKNTNFSELVRQQFDQVDEKNDNVA 60

Query: 61  SGKEYLS---------------KEVGSFISTGTELDFALEGDA-WFALESPRGIILTRDG 104
             ++                   + GS   T  +LD A      +  +        TRDG
Sbjct: 61  KARKTPPGLRLGVGAAMNARLVSDQGSIEKTERDLDIAFTSPYQYLQVNVNGNRQYTRDG 120

Query: 105 RFKV-----TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA--- 156
              +      D+   +     YPVLD    PI I    +   + E G ++          
Sbjct: 121 ALYLTPAAGNDNQLQLVTGDGYPVLDENGNPINIDDSMKQITISENGTLTASTGNAGDAS 180

Query: 157 ---TMGLYSVDMSQGFVRRENSGI------SPNIPPTPLEDLSGVTVKRGFLEDSNANSM 207
               +G+  V+  Q      N+        +  +      +   + +++G LE SN +  
Sbjct: 181 QQFNLGVVQVNNPQELKSEGNNLFSLNGNAAAALEELNGANRQSIGIQQGALEMSNVDIS 240

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            +M  +I   + +   +  I   ++ +   + ++ 
Sbjct: 241 KQMTDLISSQRSYQLNSRTITMGDQMLG-LVNSVR 274


>gi|109899402|ref|YP_662657.1| flagellar hook protein FlgE [Pseudoalteromonas atlantica T6c]
 gi|109701683|gb|ABG41603.1| flagellar basal body FlaE [Pseudoalteromonas atlantica T6c]
          Length = 458

 Score = 93.8 bits (231), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/184 (20%), Positives = 72/184 (39%), Gaps = 5/184 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61
           SFNI L+   A ++ L T A+N++N +TVGF+  + +F +V  +        +    V +
Sbjct: 2   SFNIALSGVSAAQRDLDTTANNIANVNTVGFKESRAEFGDVYASSLLAGGKTKVGDGVIT 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII---LTRDGRFKVTDDGSLVSAS 118
            +       GS   T   LD A+ G+ +FA            TR G FK+  +  +V+++
Sbjct: 62  QEVAQQFSQGSLQFTNNSLDLAVTGNGFFATIPEIDSREFSFTRAGMFKLDAENFVVNSN 121

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178
           G   +    +                +   S       +     +++  G    +    +
Sbjct: 122 GDNLLGFPVNPDGTSSSVALSTTQAVRIPDSSGSPQPTSEVSLKMNLPAGDDAVDLDLFN 181

Query: 179 PNIP 182
           P+ P
Sbjct: 182 PDDP 185



 Score = 65.7 bits (158), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 26/198 (13%), Positives = 52/198 (26%), Gaps = 10/198 (5%)

Query: 52  IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDD 111
             +           ++   G+  +TG     AL G        P   I T          
Sbjct: 259 GYRMTFSAGGDFTSIANADGTSSATGDITSVALGGTILANGSDPSQTITTNFAFDPGNAT 318

Query: 112 GSLVSASGK-----YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
               +             D  +V            +      +   + I  + L      
Sbjct: 319 PDEPTQFASAFEVTSLEQDGLAVGRLTGIDIGADGLVRATYSNGTSEPIIRVALVRFAND 378

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFN 221
           QG  ++ N+    +I           T     +    LE +N N   E+  +I   + F 
Sbjct: 379 QGLTQQSNTQWQESILSGEALAGEATTGTFGDINSSALEQANVNLTTELIDLIIAQRNFQ 438

Query: 222 SITTLIDENEKSMLEAIR 239
           + +  ++ N +     + 
Sbjct: 439 ANSRALEVNNQLNQTILN 456


>gi|78047586|ref|YP_363761.1| flagellar hook protein FlgE [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|78036016|emb|CAJ23707.1| flagellar hook protein FlgE [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 407

 Score = 93.8 bits (231), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 57/128 (44%), Gaps = 2/128 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--ISFVAS 61
            FN  L+   A    L+  ++N++N +T GF+  + +F+++  +    + +    S V  
Sbjct: 2   GFNTSLSGINAANADLNVTSNNIANVNTTGFKESRAEFADMFQSTSYGLSRNAVGSGVRV 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
                    G+   TG  LD A+ G+ +F + S    + TR G F+   +G +V+  G  
Sbjct: 62  SNVAQQFSQGNIDPTGRSLDLAVSGEGFFTVWSNGAKMYTRAGNFQTDANGYVVNPQGAR 121

Query: 122 PVLDMASV 129
             +   + 
Sbjct: 122 LQVFAPNP 129



 Score = 74.9 bits (182), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 33/92 (35%), Gaps = 5/92 (5%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSM 207
           K +  + L S    QG   + N+  + +         +        ++ G LE S  +  
Sbjct: 314 KPLGQVALSSFVNPQGLQSQGNNMWAESYTSGAARTGAPDTSDLGQIESGSLEASTVDLT 373

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            ++  MI   + F + + +I   ++     I 
Sbjct: 374 EQLVNMIVAQRNFQANSQMISTQDQVTQTIIN 405


>gi|289208114|ref|YP_003460180.1| fagellar hook-basal body protein [Thioalkalivibrio sp. K90mix]
 gi|288943745|gb|ADC71444.1| fagellar hook-basal body protein [Thioalkalivibrio sp. K90mix]
          Length = 408

 Score = 93.8 bits (231), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 43/192 (22%), Positives = 73/192 (38%), Gaps = 2/192 (1%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS--G 62
           FNIGL+   + +  L T  +N+SN  T GF+  + +F +V       + Q  +   S   
Sbjct: 3   FNIGLSGLNSAQADLQTTGNNVSNAGTTGFKRSRAEFGDVFAQSFGGVSQTATGGGSRLM 62

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                   G    T   LD A++G+ +F +      + TR G F+V  DG+LV+  G+  
Sbjct: 63  AVTQQFSQGRTEFTENGLDLAIDGEGFFVMNDGGNRVYTRAGEFQVNRDGNLVNNQGQQL 122

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
                  P           +G+    +      AT  + ++   Q      + G      
Sbjct: 123 QGYPPINPGSTDTDFNTGQLGDLRLQTGASAPQATSDIEALVNLQSDAPILDPGEFEFDD 182

Query: 183 PTPLEDLSGVTV 194
           P      + +TV
Sbjct: 183 PDSYNYSTSLTV 194



 Score = 82.6 bits (202), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 23/166 (13%), Positives = 51/166 (30%), Gaps = 12/166 (7%)

Query: 84  LEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVG 143
           L+G+  F   +             +   G+  +  G    ++          +    ++ 
Sbjct: 243 LDGNTEFPFSTDDFTNGAEGLDGTIDFAGT--TQFGGDFAVNDLGQDGFASGRLTGVDID 300

Query: 144 EKG-----EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT----- 193
             G       + +  V+  + L +    QG  +  N+  +           S  T     
Sbjct: 301 SSGVVFARFTNGQSSVLGQVALANFTNPQGLEQLGNNNWAETFAAGDPVFASPGTGNLGE 360

Query: 194 VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           ++ G LE SN +   E+  +I   + F +    I   ++     I 
Sbjct: 361 IQAGALEASNVDIAQELVNLITAQRNFQANAQTISTADQVTQTIIN 406


>gi|332305615|ref|YP_004433466.1| flagellar hook-basal body protein [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332172944|gb|AEE22198.1| flagellar hook-basal body protein [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 460

 Score = 93.8 bits (231), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/184 (20%), Positives = 70/184 (38%), Gaps = 5/184 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61
           SFNI L+   A ++ L T A+N++N +TVGF+  + +F +V  +        +    V +
Sbjct: 2   SFNIALSGVSAAQRDLDTTANNIANVNTVGFKESRAEFGDVYASSLLAGGKTKVGDGVIT 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII---LTRDGRFKVTDDGSLVSAS 118
            +       GS   T   LD A+ G+ +FA            TR G FK+  +  +V+++
Sbjct: 62  QEVAQQFSQGSLQFTNNSLDLAVTGNGFFATIPEIDSREFSFTRAGMFKLDAENFVVNSN 121

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178
           G   +    +                +   S       +     +++  G          
Sbjct: 122 GDNLLGFPVNPDGTSSSVALSTTQPVRIPDSSGSPQPTSEVSLKMNLPAGDDAVNLDLFD 181

Query: 179 PNIP 182
           P+ P
Sbjct: 182 PSDP 185



 Score = 64.5 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/198 (13%), Positives = 51/198 (25%), Gaps = 10/198 (5%)

Query: 52  IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDD 111
             +           +    G+   TG  +  AL G        P   I T          
Sbjct: 261 GYRMTFSAGGDFTEIQNADGTPSPTGDIMSVALGGTILANGSDPSQTISTNFAFDPNVAT 320

Query: 112 GSLVSASGK-----YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
               +             D  +V            +      +   + I  + L      
Sbjct: 321 ADEPTQFASAFEVTSLEQDGLAVGRLTGIDIGADGLVRATYSNGTSEPIIRVALVRFAND 380

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFN 221
           QG  ++ N+    +I           T     +    LE +N N   E+  +I   + F 
Sbjct: 381 QGLTQQSNTQWQESILSGEALAGEATTGTFGDINSSALEQANVNLTTELIDLIIAQRNFQ 440

Query: 222 SITTLIDENEKSMLEAIR 239
           + +  ++ N +     + 
Sbjct: 441 ANSRALEVNNQLNQTILN 458


>gi|157165263|ref|YP_001467845.1| flagellar hook protein FlgE [Campylobacter concisus 13826]
 gi|112801725|gb|EAT99069.1| flagellar hook protein FlgE [Campylobacter concisus 13826]
          Length = 814

 Score = 93.8 bits (231), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 52/145 (35%), Gaps = 14/145 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50
           M  S   G++   A +  +    +N++N +T GF+  +  F++++               
Sbjct: 1   MMRSLWSGVSGLQAHQIAMDVEGNNIANVNTYGFKYNRANFADILSQTPRVATAPQGQLG 60

Query: 51  --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI--ILTRDGRF 106
             +  Q                G+  ST  + D AL+G+ +F +    G     TR+G F
Sbjct: 61  GQNAMQIGLGTTINSTTRIFSQGTLTSTDKQTDLALQGNGFFVVSPDGGTTRYYTRNGDF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPI 131
                G+ V+ SG            
Sbjct: 121 VRDKAGNFVNNSGYIVQGWTRDDET 145



 Score = 69.9 bits (169), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 16/129 (12%), Positives = 42/129 (32%), Gaps = 5/129 (3%)

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
            +S +    D  +       K +          + +   +A + L S   ++G      +
Sbjct: 683 DSSTESISQDGYTGGTLNDLKIDETGTIIGAFTNGQSFGLAQVALASFTNNEGLQSEGGN 742

Query: 176 GISPNIPPTPLEDLS-----GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
             S           +       T+    LE SN +    +  +I + + F + +  I  +
Sbjct: 743 VFSQTANSGEAVIGAAGTGDKGTIAASKLEASNVDLSRALTDLIVIQRGFQANSKTITTS 802

Query: 231 EKSMLEAIR 239
           ++ +   ++
Sbjct: 803 DEMLNTLLQ 811


>gi|94987008|ref|YP_594941.1| flagellar hook protein FlgE [Lawsonia intracellularis PHE/MN1-00]
 gi|94731257|emb|CAJ54620.1| Flagellar hook protein FlgE [Lawsonia intracellularis PHE/MN1-00]
          Length = 690

 Score = 93.8 bits (231), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 56/127 (44%), Gaps = 5/127 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK---NDIDQKISFVA 60
               G++  L+  ++++ + +N++N +TVGF+  ++ F++ +         I Q    V 
Sbjct: 6   GMWTGVSGLLSHGEKMNVIGNNIANVNTVGFKGQRMDFADFIYQDGFSTAGITQIGRGVG 65

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI--ILTRDGRFKVTDDGSLVSAS 118
            G    +   GSF +T    D A+ G  +F ++         TR G F+  +DG LV   
Sbjct: 66  IGAVMGNFGQGSFETTTEATDLAIGGRGFFKVKPQGSETSYYTRAGNFRFNNDGYLVDPH 125

Query: 119 GKYPVLD 125
           G      
Sbjct: 126 GYALQGW 132



 Score = 74.5 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 16/121 (13%), Positives = 34/121 (28%), Gaps = 5/121 (4%)

Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183
            +       +        V      +     +  + LY  +  QG  R   +  S     
Sbjct: 567 QNGYGFGDLMNYSVNAEGVLFGVYSNGVQLPLYQVALYDFNSKQGLRREGGNLFSQTRES 626

Query: 184 TPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
                         ++    LE SN +   E   MI   + F S + ++   ++ +   +
Sbjct: 627 GDPSSGAANTSGFGSINANTLEGSNVDISTEFVSMIATQRGFQSNSKIVTTIDQMLETVV 686

Query: 239 R 239
            
Sbjct: 687 N 687


>gi|154174192|ref|YP_001407320.1| flagellar hook protein FlgE [Campylobacter curvus 525.92]
 gi|112803531|gb|EAU00875.1| flagellar hook protein FlgE [Campylobacter curvus 525.92]
          Length = 819

 Score = 93.8 bits (231), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 52/145 (35%), Gaps = 14/145 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50
           M  S   G++   A +  +    +N++N +T G++  +  F++++               
Sbjct: 1   MMRSLWSGVSGLQAHQIAMDVEGNNIANVNTYGYKYNRANFADILSQTPRVATAPQGELG 60

Query: 51  --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI--ILTRDGRF 106
             +  Q                G+  ST  + D AL+G+ +F +    G     TR+G F
Sbjct: 61  GQNPMQIGLGTTINSTTRIFSQGTLTSTDKQTDLALQGNGFFIVSPDGGTTRYYTRNGDF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPI 131
                G+ V+ SG            
Sbjct: 121 VRDKAGNFVNNSGHIVQGWTRDEET 145



 Score = 69.9 bits (169), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 14/94 (14%), Positives = 34/94 (36%), Gaps = 5/94 (5%)

Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS-----GVTVKRGFLEDSNAN 205
           K   +A + L +   ++G      +  S           +       TV    LE SN +
Sbjct: 723 KSFGLAQVALATFTNNEGLQSEGGNVFSQTANSGEAVIGAAGTGDKGTVAASKLEASNVD 782

Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
               +  +I + + F + +  I  +++ +   ++
Sbjct: 783 LSRALTDLIVIQRGFQANSKTITTSDEMLNTLLQ 816


>gi|23010476|ref|ZP_00051152.1| COG4786: Flagellar basal body rod protein [Magnetospirillum
           magnetotacticum MS-1]
          Length = 160

 Score = 93.8 bits (231), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/158 (21%), Positives = 69/158 (43%), Gaps = 4/158 (2%)

Query: 85  EGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE 144
                 A+++P+G   TR+G F++   G+LV++ G     D    PI I Q++   ++  
Sbjct: 4   CAGRVLAVQTPQGPRYTRNGAFELDPQGNLVTSDGYAVQGD--GGPITIGQQETGLSIAP 61

Query: 145 KGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNA 204
            G +S    +   + + +    Q       +  S   P  P        ++ G LE SN 
Sbjct: 62  DGTVSTNLGIRGRLRIVTFANPQALQSEGANLFSSQAPARPAGPGQH--LEPGALERSNV 119

Query: 205 NSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
             + EM +++ + + +  ++++I   +     AIR +A
Sbjct: 120 KPVVEMTRLMDVNRTYAMVSSVISRLDDLRGTAIRRLA 157


>gi|303326311|ref|ZP_07356754.1| flagellar hook protein FlgE [Desulfovibrio sp. 3_1_syn3]
 gi|302864227|gb|EFL87158.1| flagellar hook protein FlgE [Desulfovibrio sp. 3_1_syn3]
          Length = 503

 Score = 93.8 bits (231), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 27/169 (15%), Positives = 59/169 (34%), Gaps = 14/169 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--------- 51
           M ++  IG      L Q +    +N++N  T+G++     FS+++   +           
Sbjct: 1   MNSALYIGATGMKGLSQGMQVTTNNLANVSTIGYKQQNTLFSDMLSTSQGGTGDWWNAQE 60

Query: 52  -----IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106
                + Q    V         + G+  +T T  D A+ G  +F +     +  TR G F
Sbjct: 61  NSRVALGQTGKGVQVDAVRTIFQQGALEATNTVTDMAINGKGFFQVSDGANLYYTRAGDF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI 155
           +  ++G   + +G        +    +    E+         ++    +
Sbjct: 121 RPDNEGVWRTPTGLALNGYQYNTDGSLGGLQEVKIDRFGTMPAKSTARV 169



 Score = 76.1 bits (185), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 17/96 (17%), Positives = 38/96 (39%), Gaps = 5/96 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLED 201
             + +G+ +  + +       G  R  ++  S       +E       +  TV    +E+
Sbjct: 403 YSNGQGQNLWQIPVCRFTSEDGLRREGSNLFSATEEAGQMEMGVAGTENYGTVNAYNVEN 462

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
           SN +   EM  MI   + F S + ++   ++ + +A
Sbjct: 463 SNVDMATEMVNMIITQRGFQSNSKVVTTADQMLQKA 498


>gi|301168104|emb|CBW27690.1| putative flagellar hook protein [Bacteriovorax marinus SJ]
          Length = 426

 Score = 93.8 bits (231), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/158 (24%), Positives = 68/158 (43%), Gaps = 3/158 (1%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI---KNDIDQKISF 58
             SFNIG+    A+ Q +  + DN++N  T GF++ + +F +V+       +  DQ  + 
Sbjct: 4   LRSFNIGVTGLNAVGQGMGVIGDNIANAGTNGFKSSRAEFQDVLATSLKGIDGGDQFGAG 63

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSAS 118
                       G    T    D A+ GD +F + +P G   TRDG F    +G LV++ 
Sbjct: 64  TKLAHIKTLMTQGDVARTDNITDLAVNGDGFFKVNAPFGKGFTRDGSFHFNKEGELVNSD 123

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156
           G   +   A    +I  K+    +G     ++  + + 
Sbjct: 124 GYQVIGFEADETGKITNKEAPVKLGSTTIPAKASEKVN 161



 Score = 73.0 bits (177), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 10/124 (8%), Positives = 36/124 (29%), Gaps = 5/124 (4%)

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
               D  S             +      + + + I+ + +   + ++G  +   + +  +
Sbjct: 300 RHSQDGFSAATLASMSFNDAGILTAVYDNGESRDISQIAVAKFENNEGLFKVGKNLMKES 359

Query: 181 IPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
                             V    +E SN +   E   ++   + F +    +   ++ + 
Sbjct: 360 RNSGEAAMGKPGESGRGEVLSKSIELSNVDIANEFVGLMTAQRNFQANAKTLTTADEMLQ 419

Query: 236 EAIR 239
           + + 
Sbjct: 420 QVLN 423


>gi|238916755|ref|YP_002930272.1| flagellar hook protein FlgE [Eubacterium eligens ATCC 27750]
 gi|238872115|gb|ACR71825.1| flagellar hook protein FlgE [Eubacterium eligens ATCC 27750]
          Length = 464

 Score = 93.8 bits (231), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 15/141 (10%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S    ++   A + R+  + +N++N +TV F++  + FSEV                
Sbjct: 24  MMRSMYSAVSGLKAHQTRMDVIGNNIANVNTVAFKSQSMTFSEVFYQTTQTASGPNAESG 83

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFIS---TGTELDFALEGDAWFALESPRGIILTRDGR 105
           K   + K   + S    +S  + +  +   T    D  + G A+F + S      TR G 
Sbjct: 84  KGGTNAKQIGLGSSVGSISTSISTEGASERTDNAFDLKIGGSAFFIVNSAGNTFFTRAGN 143

Query: 106 FKVTDDGSLVSASGKYPVLDM 126
           FKV + G+LV+++G   +   
Sbjct: 144 FKVDESGALVTSAGANVMGWQ 164



 Score = 77.6 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 36/99 (36%), Gaps = 6/99 (6%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE------DLSGVTVKRGFLE 200
             +   K I  + + +    +G  +   +  S  +     +        S  ++  G LE
Sbjct: 363 YSNGDTKNIGQIAVATFSNPEGLQKEGENLYSATLNSGSFDGIGEDVTTSDGSISSGVLE 422

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            SN +   E   MI   + + + + +I  ++  + E I 
Sbjct: 423 MSNVDLSSEFTNMITTQRGYQANSRIITVSDTLLEELIN 461


>gi|327480020|gb|AEA83330.1| flagellar basal body FlaE domain-containing protein [Pseudomonas
           stutzeri DSM 4166]
          Length = 558

 Score = 93.8 bits (231), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 2/134 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61
           SFNIGL+   A  + L+   +N++N  TVGF+  + +FS+V  A       + + S V  
Sbjct: 2   SFNIGLSGLRAASKDLNVTGNNIANAGTVGFKQSRAEFSDVYAASVLGTGKNPQGSGVLM 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
                    G+   T   LD A+ G+ +F + +   +  TR G F    +G LV   G  
Sbjct: 62  SNISQQFNQGNINYTQNALDLAINGNGFFQVSNNGAVSYTRAGYFGTDREGFLVDNFGYK 121

Query: 122 PVLDMASVPIQIPQ 135
                      +  
Sbjct: 122 LQGFPVDNNGNLQN 135



 Score = 66.8 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 19/140 (13%), Positives = 42/140 (30%), Gaps = 9/140 (6%)

Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
                     V++  +          ++I     IF     G+   +G++I    L +  
Sbjct: 421 NATQYASAFAVNSVAQDGYTTGELAGLEIDDTGVIFARYTNGQSKVQGQII----LANFA 476

Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQK 219
             QG      +    +         +  +     ++ G LEDSN     ++  +I   + 
Sbjct: 477 NVQGLTPVGKTQWVQSFESGEPVVGTPGSGTLGALQAGALEDSNVELSDQLVNLIVAQRN 536

Query: 220 FNSITTLIDENEKSMLEAIR 239
           + +    I+         I 
Sbjct: 537 YQANAKTIETESAITQTIIN 556


>gi|319764539|ref|YP_004128476.1| flagellar hook-basal body protein [Alicycliphilus denitrificans BC]
 gi|330826755|ref|YP_004390058.1| flagellar hook-basal body protein [Alicycliphilus denitrificans
           K601]
 gi|317119100|gb|ADV01589.1| flagellar hook-basal body protein [Alicycliphilus denitrificans BC]
 gi|329312127|gb|AEB86542.1| flagellar hook-basal body protein [Alicycliphilus denitrificans
           K601]
          Length = 426

 Score = 93.8 bits (231), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/193 (20%), Positives = 69/193 (35%), Gaps = 8/193 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN--DIDQKISFVAS 61
            F  GL+   A  + L  +  N++N++TVGF+  + +F+ +V               V  
Sbjct: 2   GFQQGLSGLNASSKNLDVIGHNIANSNTVGFKASRTEFASMVATAIGTASTGNAGIGVQV 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGK 120
           G        G+   TG  LD A+ G+ +F ++ P G    TR G FK+ D G++++ +G 
Sbjct: 62  GAVAQQFTQGNITVTGNNLDVAINGNGFFKIQQPDGSFAYTRAGNFKLDDKGNVITNNGG 121

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
             +        Q         +         G  I      S+  +     R        
Sbjct: 122 KVMGYPMDPITQTRTASTPQPLVFP-----TGAPIPAKQTTSIKATFNLDARAPDAAGNP 176

Query: 181 IPPTPLEDLSGVT 193
               P+      T
Sbjct: 177 SATPPIAATPRST 189



 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 27/205 (13%), Positives = 56/205 (27%), Gaps = 11/205 (5%)

Query: 45  VGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDG 104
           V    +D +     VA+    ++ +    I+       A  G       +P         
Sbjct: 221 VYDRLDDPNATPPVVATPIGQITFDNNGQITGPAATPPA-TGFQLPITIAPPTPNPNNLP 279

Query: 105 RFKVTDDGSLVSASG-----KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG 159
            + V  +   V+  G          D  +                    +   +    + 
Sbjct: 280 AYTVQVNLDGVTQFGAKFAVSDLTQDGYTAGQLTGINIGDDGTIMTSYSNGVTRAEGQIA 339

Query: 160 LYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMI 214
           L S   +QG     N+                   +   ++ G LEDSN +   E+  M+
Sbjct: 340 LASFRNAQGLADIGNNLWVETFESGQPVMGVATEGAFGALRSGALEDSNVDLTAELVNMM 399

Query: 215 HLTQKFNSITTLIDENEKSMLEAIR 239
              + + +    I   ++ M   + 
Sbjct: 400 TAQRAYQANAQTIKTQDQVMSTLVN 424


>gi|146296289|ref|YP_001180060.1| hypothetical protein Csac_1266 [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145409865|gb|ABP66869.1| protein of unknown function DUF1078 domain protein
           [Caldicellulosiruptor saccharolyticus DSM 8903]
          Length = 484

 Score = 93.8 bits (231), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 65/155 (41%), Gaps = 15/155 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S    + +  A + R+  + DN++N +TVGF++ +V F+ V  ++            
Sbjct: 1   MMRSMFSSITSLRAHQTRMDVIGDNIANVNTVGFKSSRVTFASVFASVIKAASAPDTTSG 60

Query: 49  --KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGR 105
              ++  Q    V+     ++   GS   T    D A+EGD +F +    R    TR G 
Sbjct: 61  RGGSNPMQIGLGVSVASVDMNMTRGSLQRTDNPTDLAIEGDGFFVVGGDGRAPRFTRAGN 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF 140
           F +   G+LV+A+G   +  MA          +  
Sbjct: 121 FSLDKMGNLVTANGLNVLGWMADPVNNQIDTTKSP 155



 Score = 85.3 bits (209), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 14/93 (15%), Positives = 36/93 (38%), Gaps = 5/93 (5%)

Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANS 206
            ++I  + + +     G  R  ++     +     E  +       T+ +G LE SN + 
Sbjct: 389 NQLIGQIAIATFANPAGLQRIGDNLYINTVNSGDPEIGTPGSGSRGTISQGTLEMSNVDL 448

Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             E   MI   + + +   +I  +++ + + + 
Sbjct: 449 AKEFTDMIVTQRGYQANARVITASDELLQDLVN 481


>gi|319787121|ref|YP_004146596.1| flagellar hook-basal body protein [Pseudoxanthomonas suwonensis
           11-1]
 gi|317465633|gb|ADV27365.1| flagellar hook-basal body protein [Pseudoxanthomonas suwonensis
           11-1]
          Length = 406

 Score = 93.4 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/129 (24%), Positives = 60/129 (46%), Gaps = 2/129 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVAS 61
           SFN  L+   A    L+  ++N++N++TVGF++ + +F+++  +    +  +   S V  
Sbjct: 2   SFNASLSGINAANADLNVTSNNIANSNTVGFKSSRAEFADLFSSTSYGLASNAVGSGVKV 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
                    G+   TG  LDFA++G+  F +        TR G F+  + G +V+  G  
Sbjct: 62  SNVAQQFSQGNIDPTGRSLDFAIDGEGLFTVSKNGDTFYTRAGNFQPDNRGFVVTPDGAR 121

Query: 122 PVLDMASVP 130
             +   +  
Sbjct: 122 LQVYAPNAN 130



 Score = 76.1 bits (185), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 13/90 (14%), Positives = 30/90 (33%), Gaps = 5/90 (5%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYE 209
           +  + L +    QG     N+  +           +        ++ G LE S  +   +
Sbjct: 315 LGQIVLTNFVNPQGLQAVGNNMWAATHSSGTPRSGAPDSSDFGRIQAGALEASTVDLTEQ 374

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +  MI   + F +   +I   +++    I 
Sbjct: 375 LVNMITAQRNFQANAQMISTQDQATQTVIN 404


>gi|224419257|ref|ZP_03657263.1| flagellar hook protein FlgE [Helicobacter canadensis MIT 98-5491]
 gi|253826972|ref|ZP_04869857.1| flagellar hook protein [Helicobacter canadensis MIT 98-5491]
 gi|313142759|ref|ZP_07804952.1| flagellar hook protein [Helicobacter canadensis MIT 98-5491]
 gi|253510378|gb|EES89037.1| flagellar hook protein [Helicobacter canadensis MIT 98-5491]
 gi|313131790|gb|EFR49407.1| flagellar hook protein [Helicobacter canadensis MIT 98-5491]
          Length = 751

 Score = 93.4 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 33/141 (23%), Positives = 53/141 (37%), Gaps = 14/141 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++   A +  L   ++N++N +T GF+  +  FS +V   K           
Sbjct: 1   MLRSLWSGVSGMQAHQVALDVESNNIANVNTNGFKYSRADFSTMVSQTKRAATIPYAGYG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106
                                 GS  +T  + D ALEG+  F + +      + TRDG F
Sbjct: 61  GVNDYSVGLGTGIETTTKIFSQGSLQNTDRKADLALEGNGMFVVSNNGGFTNMYTRDGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMA 127
                G+LV+ SG      + 
Sbjct: 121 SFDAVGNLVTTSGYIVQGWVR 141



 Score = 61.4 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 12/127 (9%), Positives = 42/127 (33%), Gaps = 5/127 (3%)

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           +       D  +  +      +          + +   +A + + S    +G     ++ 
Sbjct: 621 SQANNIDGDGYTAGMLQDFYFDATGTMIGKFDNGQTLALAQVAVASFANYEGLQESGSNL 680

Query: 177 ISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
            + +                 +++   LE SN++    + Q+I + + F + +  I  ++
Sbjct: 681 FAESPNSGGPTIGTAGSGGRASIQASKLEMSNSDLSRGLTQLIVVQRGFQASSKSITTSD 740

Query: 232 KSMLEAI 238
           + +   +
Sbjct: 741 QILNTLL 747


>gi|196045154|ref|ZP_03112387.1| putative flagellar basal-body rod protein [Bacillus cereus 03BB108]
 gi|196024156|gb|EDX62830.1| putative flagellar basal-body rod protein [Bacillus cereus 03BB108]
          Length = 249

 Score = 93.4 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/246 (16%), Positives = 84/246 (34%), Gaps = 15/246 (6%)

Query: 11  AQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DIDQKISFVASG 62
             +   QR++  ++N++N  T+GF+   +        +          +I      V   
Sbjct: 2   GMMNYMQRINVHSNNVANAQTIGFKAENMTSKVFDVQDTYRRGDGAVTNIGSVDYAVVPA 61

Query: 63  KEYLSKEVGSFISTGTELDFALEGDA-----WFALESPRGIILTRDGRFKVTDDGSLVSA 117
             +++   G+   T +  DF L+        +F         LTRDG F +  D  L + 
Sbjct: 62  ATHVNLVQGNIQMTNSATDFFLDDGTAGTASFFVTSKNNETFLTRDGSFTLNSDRYLQTT 121

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV--DMSQGFVRRENS 175
           SG + + +                       +     IA +   +V  + +   ++REN 
Sbjct: 122 SGAFVMGENNERIRIPEGAKVAVQADGTLYDAVTQNNIARLQTKTVGAEANNRLIQRENK 181

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
             +               VK   LE+SN +   EM  ++   +  ++   ++   +K   
Sbjct: 182 SFTLAEGNIADLPNGTGLVKNHMLENSNVDMTKEMADLMTDQRMISASQRVMTSFDKIYE 241

Query: 236 EAIRNI 241
           +    I
Sbjct: 242 KEANEI 247


>gi|89092136|ref|ZP_01165091.1| flagellar hook protein (FlgE)-like [Oceanospirillum sp. MED92]
 gi|89083871|gb|EAR63088.1| flagellar hook protein (FlgE)-like [Oceanospirillum sp. MED92]
          Length = 634

 Score = 93.4 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/209 (19%), Positives = 72/209 (34%), Gaps = 9/209 (4%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK---ISF 58
              FN  +    A    L  + +N++N+ TVGF+T + +F ++               S 
Sbjct: 1   MAGFNTAVTGLKAASTDLDVIGNNIANSSTVGFKTSRTEFGDIYATAVVGAGSSNVAGSG 60

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSA 117
           V         + G+   T   LD A+ G  +F L+  + G   TR G F++  DG +VS 
Sbjct: 61  VTVSDIAQDFQAGTIEFTNNNLDLAINGSGFFQLDDGQGGTTFTRAGAFQLDKDGFIVSK 120

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN--- 174
           SGK+                 +    ++        +  +  + S +         +   
Sbjct: 121 SGKFLQGYGLDDQGNRLPIGNLAVSQKESPPKATEDIDLSFNIDSREDPTTLTFPYDKDT 180

Query: 175 --SGISPNIPPTPLEDLSGVTVKRGFLED 201
             S        T     +  T+K   +E 
Sbjct: 181 PASFTYSTTVRTFDSLGNEHTIKYNMVER 209



 Score = 72.2 bits (175), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 13/122 (10%), Positives = 37/122 (30%), Gaps = 5/122 (4%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             D  +    I               + + + +  + + + +   G     ++  +  + 
Sbjct: 512 TQDGYTKGDLIGVSFSETGEMVASFSNGQNQDLGVVAIATFENQSGLQPSGDTEWTATLT 571

Query: 183 P-----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                  P       T++   LE SN +   E+  +I   + F + +  I+         
Sbjct: 572 SGDAIVNPPGTGLNGTLRSAALEQSNVDLSAELVALIEAQRNFQANSKTIETQNTVTQAI 631

Query: 238 IR 239
           ++
Sbjct: 632 LQ 633


>gi|308050372|ref|YP_003913938.1| flagellar hook-basal body protein [Ferrimonas balearica DSM 9799]
 gi|307632562|gb|ADN76864.1| flagellar hook-basal body protein [Ferrimonas balearica DSM 9799]
          Length = 468

 Score = 93.4 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/184 (21%), Positives = 75/184 (40%), Gaps = 5/184 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61
           SFNI L+   A ++ L+T ++N++N +T+GF+  + +F++V       N      + VA+
Sbjct: 2   SFNISLSGLNAAQKDLNTTSNNIANVNTIGFKESRAEFADVYNNSLFTNSKTNVGAGVAT 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALES---PRGIILTRDGRFKVTDDGSLVSAS 118
            +       G+   T   LD A+ G+ +F   S    +    TR G FK+ D   +V + 
Sbjct: 62  AQIAQQFHQGALSFTNNALDLAINGNGFFVTNSELGGQDFSYTRAGAFKLNDSNFMVDSQ 121

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178
           G Y +    +    +           +   +       +    S+++    V    +   
Sbjct: 122 GNYLMALPVNADGSVQSVSLSTTKPVQIPQTAGQPAATSDINMSMNLPANDVEMNPANFD 181

Query: 179 PNIP 182
           P  P
Sbjct: 182 PTDP 185



 Score = 66.4 bits (160), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 35/98 (35%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGI-SPNIPPTP----LEDLSGVTVKRGFLED 201
             +   + +  + L      QG  +  N+     N    P        +  +++   LE 
Sbjct: 369 YSNGTQQALGKVALARFSNEQGLTQIGNTSWKQSNDSGEPLVGEPNVGAFGSIRSAALEQ 428

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E+  +I   + F + +  +D + +     ++
Sbjct: 429 SNVDLTTELVDLISAQRNFQANSRALDVSNQLSQNILQ 466


>gi|148546706|ref|YP_001266808.1| flagellar basal body FlaE domain-containing protein [Pseudomonas
           putida F1]
 gi|148510764|gb|ABQ77624.1| flagellar basal body FlaE domain protein [Pseudomonas putida F1]
          Length = 584

 Score = 93.4 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/134 (25%), Positives = 59/134 (44%), Gaps = 3/134 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---DIDQKISFVA 60
           SFNIGL+   A  ++L    +N++N +T GF+  + +F++V           +Q  + V 
Sbjct: 2   SFNIGLSGLYAANKQLDVTGNNIANVNTTGFKASRAEFADVYAGANRLGVGKNQVGNGVR 61

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
                     G   +TG  LD  ++G  +F L      + TR G F+ + D  + ++ G 
Sbjct: 62  LAAISQQFTQGDVNTTGNALDMGIQGQGFFVLSDNGSKVYTRAGSFQPSKDNFVETSDGL 121

Query: 121 YPVLDMASVPIQIP 134
                MA    +I 
Sbjct: 122 RLQGYMADATGKIQ 135



 Score = 69.5 bits (168), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 27/218 (12%), Positives = 59/218 (27%), Gaps = 21/218 (9%)

Query: 29  TDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTEL-DFALEGD 87
             T+ F +     S       + +    + V +    +     +  ++G    + A+   
Sbjct: 379 VGTIAFNSDGSVNSMTADNTGHPVGTSFTVVNNTFSMIGWVPAAEDASGNWSANGAVGDA 438

Query: 88  AWFALESPRGIIL-TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG 146
           A   +         T   R   + DG                         +   V    
Sbjct: 439 AGMKMSMASTTSYNTETARMSQSQDGYATGILSNL--------------SIDATGVLFAS 484

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLED 201
             + + + I  + L S    QG  +  ++  +             +  +   ++   LE 
Sbjct: 485 FSNGQSRAIGQVALASFANEQGLQQIGSTRWTETYNSGIPGIDSPKTGTLGAIESNSLEG 544

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN N   E+  +I     + +    I      M   I+
Sbjct: 545 SNVNLTQELVDLIKAQSYYQANAKTISTESTVMQTIIQ 582


>gi|190574263|ref|YP_001972108.1| flagellar hook protein FlgE [Stenotrophomonas maltophilia K279a]
 gi|190012185|emb|CAQ45808.1| putative flagellar hook protein [Stenotrophomonas maltophilia
           K279a]
          Length = 407

 Score = 93.4 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/193 (19%), Positives = 71/193 (36%), Gaps = 4/193 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVAS 61
            FN+ L+   A    LS  A+N++N +T GF+  + +F+++  A    +  +   S V  
Sbjct: 2   GFNVSLSGINAANSDLSVTANNVANVNTTGFKESRAEFADLFSATGYGLSKNAVGSGVRV 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
                  + G    TG  LD A+ G+ +F +      + +R G F+    G +V+  G  
Sbjct: 62  SNVAQQFKQGHNEQTGRSLDMAISGEGFFTMNMNGTRVYSRAGNFQTDASGYVVNPQG-- 119

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
             L + +        D    V  +   +       +       +     +   +   P  
Sbjct: 120 ARLQVFAPNADGTNFDAGRMVDLQLLTTDSPPKQTSEVKVGFTLPANAKQPTVTTFDPTD 179

Query: 182 PPTPLEDLSGVTV 194
             +      G+TV
Sbjct: 180 SNSYNHSSGGITV 192



 Score = 77.2 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 14/92 (15%), Positives = 31/92 (33%), Gaps = 5/92 (5%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSM 207
           K +  + L + +  QG   + N+                   +   ++ G LE S  +  
Sbjct: 314 KPLGQVALTTFNNPQGLESKGNNLWVDTFSSGTPRTGMPDTSNLGKIQAGSLEASTVDLT 373

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            ++  MI   + F +   +I   ++     I 
Sbjct: 374 EQLVNMITAQRNFQANAQMITTQDQITQTVIN 405


>gi|315127353|ref|YP_004069356.1| flagellar hook protein E [Pseudoalteromonas sp. SM9913]
 gi|315015867|gb|ADT69205.1| flagellar hook protein E [Pseudoalteromonas sp. SM9913]
          Length = 440

 Score = 93.4 bits (230), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 5/125 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61
           SFNI L    A ++ L   A+N++N +T GF+  + +F++V  +        +    V +
Sbjct: 2   SFNIALTGLAAAQKDLDVTANNIANVNTTGFKESRAEFADVYASSVFSAGKTKNGDGVQT 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESP---RGIILTRDGRFKVTDDGSLVSAS 118
                    GS   T   LD A+ G+ +FA       +    TR G FK+  D  +V A 
Sbjct: 62  TMVAQQFHQGSLQFTNNSLDLAITGEGYFATSQDLGAQDFTYTRAGAFKLNKDNFVVDAK 121

Query: 119 GKYPV 123
           G +  
Sbjct: 122 GNFLQ 126



 Score = 68.0 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/215 (11%), Positives = 54/215 (25%), Gaps = 24/215 (11%)

Query: 30  DTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAW 89
            T GF          + A  N                +   G   +     D A+     
Sbjct: 243 STFGFDAS------GLPATTNGAPNVGPTFTDVNLTGTNLSGILSNGAQFDDIAINWRDE 296

Query: 90  FALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEIS 149
               +                    V A  +          I I    ++      G+ +
Sbjct: 297 AGTANRTPTQY---------ASRFEVKALEQDGATVGRLAGIDIGTDGKVVASYSNGDST 347

Query: 150 QKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNA 204
                +  + +     SQG  +  ++    ++           +     +    LE SN 
Sbjct: 348 Y----LGQVAMVRFSNSQGLQQVGDTSWKKSLTSGEPIAGEPGSGTLGNINSSALEQSNV 403

Query: 205 NSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           N   E+  +I   + F + +  ++ N       ++
Sbjct: 404 NLTNELVDLISAQRNFQANSRALEVNSTIQQNILQ 438


>gi|118475525|ref|YP_892884.1| flagellar hook protein FlgE [Campylobacter fetus subsp. fetus
           82-40]
 gi|118414751|gb|ABK83171.1| flagellar hook protein FlgE [Campylobacter fetus subsp. fetus
           82-40]
          Length = 911

 Score = 93.4 bits (230), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 52/145 (35%), Gaps = 14/145 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  +   G+    A +  +    DN++N +TVGF+  +  F+++                
Sbjct: 1   MMRALWAGVTGLQAHQIAMDVEGDNIANVNTVGFKYSRASFADLFSQTAKVATAPQGDLG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106
             +  Q              + GS  +T    D A++GD +F +     +    TR+G F
Sbjct: 61  GKNSMQIGLGTQINSVTKIFKQGSVQTTDKNTDLAIQGDGFFVVSPDGGKTYKYTRNGDF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPI 131
                G+ V  +G      + +   
Sbjct: 121 SRDSLGNFVDKNGYIVQGWLRNEDT 145



 Score = 73.0 bits (177), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 12/129 (9%), Positives = 39/129 (30%), Gaps = 5/129 (3%)

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
           +++    V D  +       + +          + +   +A + L     ++G      +
Sbjct: 780 TSTTDNIVQDGYTAGTLNELRVDESGTIIGAFTNGRSFGLAQVALAKFTNNEGLESDGGN 839

Query: 176 GISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
                                  +    LE SN +    + Q+I + + + + +  I   
Sbjct: 840 VFVQTANSGAPVIGSAQTAGRGKINASSLEMSNVDLSRSLTQLIVVQRGYQANSKTITTG 899

Query: 231 EKSMLEAIR 239
           ++ +   ++
Sbjct: 900 DQMLNTLLQ 908


>gi|325274800|ref|ZP_08140828.1| flagellar hook protein FlgE [Pseudomonas sp. TJI-51]
 gi|324100068|gb|EGB97886.1| flagellar hook protein FlgE [Pseudomonas sp. TJI-51]
          Length = 440

 Score = 93.4 bits (230), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 36/136 (26%), Positives = 60/136 (44%), Gaps = 4/136 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ----KISFV 59
           SFNIGL+   A  + L+   +N++N  T GF++ + +F++                 + V
Sbjct: 2   SFNIGLSGLYAANKALNVTGNNIANVATTGFKSSRAEFADQYSNSIRGTSAGKSVIGTGV 61

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119
            +         G+  +TG  LD A++G+ +FAL      I TR G F    +G +V+A G
Sbjct: 62  KTAAVSQLFTPGNINATGQALDMAIDGNGFFALNDNGSKIYTRAGAFYSDKEGYVVNAGG 121

Query: 120 KYPVLDMASVPIQIPQ 135
                       +I Q
Sbjct: 122 ANLQGYAVGEDGKIIQ 137



 Score = 68.7 bits (166), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 30/92 (32%), Gaps = 5/92 (5%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLEDSNANSM 207
           KVI  + + +    QG      +    +           +  +   +  G LEDSN +  
Sbjct: 347 KVIGQVAIANFANLQGLTPIGGTNWKESYASGVPVIGAPDTGTLGQITGGALEDSNVDLT 406

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            E+  +I     + +    I      M   I+
Sbjct: 407 GELVNLIKAQSNYQANAKTISTESTIMQTIIQ 438


>gi|94500241|ref|ZP_01306774.1| Flagellar hook protein FlgE [Oceanobacter sp. RED65]
 gi|94427540|gb|EAT12517.1| Flagellar hook protein FlgE [Oceanobacter sp. RED65]
          Length = 1240

 Score = 93.4 bits (230), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 2/133 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61
           +FNIGL+   A    L    +N++N  TVGF+  + +F++V              S V  
Sbjct: 2   AFNIGLSGIRAASTDLEVTGNNVANASTVGFKESRAEFADVYTTTILGTGSKPVGSGVLV 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
                    G+   T   LD A++G+ +F L        TR G F +  DG +V+ SG  
Sbjct: 62  DNVRQEFSQGNISGTENALDMAIDGNGFFILNDNGTESYTRAGIFGLDKDGFVVANSGAR 121

Query: 122 PVLDMASVPIQIP 134
                A+    + 
Sbjct: 122 LQGYEANGDGVVN 134



 Score = 72.6 bits (176), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 14/94 (14%), Positives = 35/94 (37%), Gaps = 5/94 (5%)

Query: 151  KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNAN 205
            + +V+  + L S    +G +   ++    +              +   ++   LEDSN +
Sbjct: 1146 QAEVLGQVALASFKNPEGLIPLGDTAWGESFESGTPTVGSPRTGTFGNLRSSALEDSNVD 1205

Query: 206  SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
               E+  +I   + F +    I+ ++      I+
Sbjct: 1206 LSEELVGLIIAQRNFQASAKTIETSDTVTQTIIQ 1239


>gi|254519414|ref|ZP_05131470.1| flagellar hook protein [Clostridium sp. 7_2_43FAA]
 gi|226913163|gb|EEH98364.1| flagellar hook protein [Clostridium sp. 7_2_43FAA]
          Length = 885

 Score = 93.4 bits (230), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 34/226 (15%), Positives = 67/226 (29%), Gaps = 15/226 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--------- 51
           M  S   G++     + +L  + +N+SN  T  F++ + +FS+++    +D         
Sbjct: 7   MLRSMYSGISGMKVNQTKLDVIGNNISNVGTTSFKSSRARFSDMLSQNVSDAMAPSNNQG 66

Query: 52  ---IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFK 107
                Q    V           G    TG +LD A++GD +F +     I   T +   +
Sbjct: 67  GVNASQVGLGVQLASIDSVMTQGMMQPTGRQLDVAIDGDGFFMVSKGPAIYDGTLEVNHR 126

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
                    +        M S        ++   +   G       +             
Sbjct: 127 AGAHNITSQSLSNSGSEIMYSRDGSFILDEQGNLLTGDGFRVMGYSLTNDDSSQEATGQV 186

Query: 168 GFVRRENSGISPNIPPTPLEDLSG--VTVKRGFLEDSNANSMYEMG 211
                         P + L        +V  G +  +N N   ++ 
Sbjct: 187 PNAVSTAGLDFRFGPGSQLNGFKVVLGSVGPGTVTSANVNKAEKLI 232



 Score = 74.9 bits (182), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 14/97 (14%), Positives = 35/97 (36%), Gaps = 12/97 (12%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIP-PTPLEDLSGVTV-----------KRGFLEDS 202
           +  + + S    +G  +   +  S ++     +      T+            +G LE S
Sbjct: 786 LGQLAMASFKNPEGLTKLGGNLYSSSVNSGDAIIKSGVGTLNDDNSNGYGDNLQGMLEMS 845

Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           N +   +   MI  ++ F +   +I   ++ + + I 
Sbjct: 846 NVDLSEQFTDMIVSSRAFQAAGKMITTGDEILQDIIN 882


>gi|254524254|ref|ZP_05136309.1| flagellar biosynthesis hook protein [Stenotrophomonas sp. SKA14]
 gi|219721845|gb|EED40370.1| flagellar biosynthesis hook protein [Stenotrophomonas sp. SKA14]
          Length = 407

 Score = 93.0 bits (229), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 56/129 (43%), Gaps = 2/129 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVAS 61
            FN+ L+   A    LS  A+N++N +T GF+  + +F+++  A    +  +   S V  
Sbjct: 2   GFNVSLSGINAANSDLSVTANNVANVNTTGFKESRAEFADLFSATGYGLSKNAVGSGVRV 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
                  + G    TG  LD A+ G+ +F +      + +R G F+    G +V+  G  
Sbjct: 62  SNVAQQFKQGHNEQTGRSLDMAISGEGFFTMNMNGTRVYSRAGNFQTDASGFVVNPQGAR 121

Query: 122 PVLDMASVP 130
             +   +  
Sbjct: 122 LQVFAPNAD 130



 Score = 77.6 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 14/92 (15%), Positives = 31/92 (33%), Gaps = 5/92 (5%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSM 207
           K +  + L + +  QG   + N+                   +   ++ G LE S  +  
Sbjct: 314 KPLGQVALTTFNNPQGLESKGNNLWVDTFSSGTPRTGMPDTSNLGKIQAGSLEASTVDLT 373

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            ++  MI   + F +   +I   ++     I 
Sbjct: 374 EQLVNMITAQRNFQANAQMITTQDQITQTVIN 405


>gi|15596277|ref|NP_249771.1| flagellar hook protein FlgE [Pseudomonas aeruginosa PAO1]
 gi|107100525|ref|ZP_01364443.1| hypothetical protein PaerPA_01001550 [Pseudomonas aeruginosa PACS2]
 gi|218892956|ref|YP_002441825.1| flagellar hook protein FlgE [Pseudomonas aeruginosa LESB58]
 gi|254234216|ref|ZP_04927539.1| flagellar hook protein FlgE [Pseudomonas aeruginosa C3719]
 gi|254239438|ref|ZP_04932760.1| flagellar hook protein FlgE [Pseudomonas aeruginosa 2192]
 gi|9946996|gb|AAG04469.1|AE004539_11 flagellar hook protein FlgE [Pseudomonas aeruginosa PAO1]
 gi|126166147|gb|EAZ51658.1| flagellar hook protein FlgE [Pseudomonas aeruginosa C3719]
 gi|126192816|gb|EAZ56879.1| flagellar hook protein FlgE [Pseudomonas aeruginosa 2192]
 gi|218773184|emb|CAW28996.1| flagellar hook protein FlgE [Pseudomonas aeruginosa LESB58]
          Length = 462

 Score = 93.0 bits (229), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 35/134 (26%), Positives = 58/134 (43%), Gaps = 2/134 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61
           SFNIGL+   A    L+   +N++N  TVGF+  + +F++V  A    +  + + S V  
Sbjct: 2   SFNIGLSGIQAASSGLNVTGNNIANAGTVGFKQSRAEFADVYAASVLGSGSNPQGSGVLL 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
                  + G+  ST + LD A+ G+ +F   +   I  TR G F       +V  +G  
Sbjct: 62  SDVSQMFKQGNIDSTNSVLDLAINGNGFFVTSNNGAISYTRAGYFNTDKQDFIVDNNGYR 121

Query: 122 PVLDMASVPIQIPQ 135
                     Q+  
Sbjct: 122 LQGYAVGPNGQLQN 135



 Score = 72.6 bits (176), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 17/124 (13%), Positives = 37/124 (29%), Gaps = 5/124 (4%)

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
            P+ D  +       + +   V      + + KV   + L +    QG      +    +
Sbjct: 337 NPIQDGYTTGQLAGLEIDDTGVIFARYTNGQSKVQGQVVLANFANIQGLTPIGKTSWVQS 396

Query: 181 IPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
                    +        ++ G LE SN +   E+  +I   + + +    I   +    
Sbjct: 397 SESGEPAVGAPRSGTLGALQSGALEASNVDISNELVNLIVHQRNYQANAKTIQTEDAVTQ 456

Query: 236 EAIR 239
             I 
Sbjct: 457 TIIN 460


>gi|116049009|ref|YP_792189.1| flagellar hook protein FlgE [Pseudomonas aeruginosa UCBPP-PA14]
 gi|296390556|ref|ZP_06880031.1| flagellar hook protein FlgE [Pseudomonas aeruginosa PAb1]
 gi|313106035|ref|ZP_07792294.1| flagellar hook protein FlgE [Pseudomonas aeruginosa 39016]
 gi|115584230|gb|ABJ10245.1| flagellar hook protein FlgE [Pseudomonas aeruginosa UCBPP-PA14]
 gi|310878796|gb|EFQ37390.1| flagellar hook protein FlgE [Pseudomonas aeruginosa 39016]
          Length = 462

 Score = 93.0 bits (229), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 35/134 (26%), Positives = 58/134 (43%), Gaps = 2/134 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61
           SFNIGL+   A    L+   +N++N  TVGF+  + +F++V  A    +  + + S V  
Sbjct: 2   SFNIGLSGIQAASSGLNVTGNNIANAGTVGFKQSRAEFADVYAASVLGSGSNPQGSGVLL 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
                  + G+  ST + LD A+ G+ +F   +   I  TR G F       +V  +G  
Sbjct: 62  SDVSQMFKQGNIDSTNSVLDLAINGNGFFVTSNNGAISYTRAGYFNTDKQDFIVDNNGYR 121

Query: 122 PVLDMASVPIQIPQ 135
                     Q+  
Sbjct: 122 LQGYAVGPNGQLQN 135



 Score = 73.0 bits (177), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 17/124 (13%), Positives = 37/124 (29%), Gaps = 5/124 (4%)

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
            P+ D  +       + +   V      + + KV   + L +    QG      +    +
Sbjct: 337 NPIQDGYTTGQLAGLEIDDTGVIFARYTNGQSKVQGQVVLANFANIQGLTPIGKTSWVQS 396

Query: 181 IPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
                    +        ++ G LE SN +   E+  +I   + + +    I   +    
Sbjct: 397 AESGEPAVGAPRSGTLGALQSGALEASNVDISNELVNLIVHQRNYQANAKTIQTEDAVTQ 456

Query: 236 EAIR 239
             I 
Sbjct: 457 TIIN 460


>gi|325918877|ref|ZP_08180954.1| flagellar hook protein FlgE [Xanthomonas vesicatoria ATCC 35937]
 gi|325534914|gb|EGD06833.1| flagellar hook protein FlgE [Xanthomonas vesicatoria ATCC 35937]
          Length = 407

 Score = 93.0 bits (229), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 58/128 (45%), Gaps = 2/128 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--ISFVAS 61
           +FN  L+   A    L+  ++N++N +T GF+  + +F+++  +    + +    S V  
Sbjct: 2   AFNTSLSGINAANADLNVTSNNIANVNTTGFKESRAEFADMFQSTSYGLSRNAVGSGVRV 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
                    G+   TG  LD A+ G+ +F + S    + TR G F+   +G +++  G  
Sbjct: 62  SNVAQQFSQGNIDPTGRSLDLAVSGEGFFTVSSNGAKMYTRAGNFQTDSNGYVINPQGAR 121

Query: 122 PVLDMASV 129
             +   + 
Sbjct: 122 LQVFAPNP 129



 Score = 74.9 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 33/92 (35%), Gaps = 5/92 (5%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSM 207
           K +  + L S    QG   + N+  + +         +        ++ G LE S  +  
Sbjct: 314 KPLGQVALSSFVNPQGLQSQGNNMWAESYTSGAARTGAPDTSDLGQIESGSLEASTVDLT 373

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            ++  MI   + F + + +I   ++     I 
Sbjct: 374 EQLVNMIVAQRNFQANSQMISTQDQVTQTIIN 405


>gi|317154735|ref|YP_004122783.1| flagellar hook-basal body protein [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316944986|gb|ADU64037.1| flagellar hook-basal body protein [Desulfovibrio aespoeensis
           Aspo-2]
          Length = 554

 Score = 93.0 bits (229), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 56/171 (32%), Gaps = 5/171 (2%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA---IKNDIDQKISFV 59
           +S   G+       +R++ + +N++N +TVGF+   ++F +++       N + Q    V
Sbjct: 5   SSLYAGITGLTVHSERMTVIGNNLANVNTVGFKGTWMQFEDLLSQDFATVNGVGQIGRGV 64

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP--RGIILTRDGRFKVTDDGSLVSA 117
                Y     GSF S+    D A+ GD  F L          +R G F+  +DG LV  
Sbjct: 65  RVSTIYSDFGQGSFESSTEATDVAISGDGMFVLSPKGLDSKFYSRAGNFRFDNDGYLVDP 124

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
            G                                G              + 
Sbjct: 125 HGYVVQGWAVEQATTSVSSTSATTTSTVNSTRIVGTPTDIRLDNFQSSPKA 175



 Score = 77.2 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 55/210 (26%), Gaps = 14/210 (6%)

Query: 36  TIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP 95
                 +E   A    +D  IS         +  +G+  S       A+     +     
Sbjct: 348 KSNASTAEAANATPIQMDFGISNNDLSGNGWTVSLGTMPSNAAAAQLAITNSTGYLPSF- 406

Query: 96  RGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI 155
                 RD         S  +                I Q   +   G        G+VI
Sbjct: 407 ------RDPAVSALATQSYNTGGSSTLFQGQDGYSAGILQNISVSREGVLTGHYSNGEVI 460

Query: 156 ATMGLY--SVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMY 208
               L   +     G  R   +  S      P            TV    LE SN +   
Sbjct: 461 ELYALTLATFTNKHGLRREGGNLFSETRESGPALTGQAGSSGKGTVDGNALELSNVDMAT 520

Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           E  +MI   + F + T +I   +  + E I
Sbjct: 521 EFVRMITTQRGFQANTKVITTTDSMLGEVI 550


>gi|323700159|ref|ZP_08112071.1| fagellar hook-basal body protein [Desulfovibrio sp. ND132]
 gi|323460091|gb|EGB15956.1| fagellar hook-basal body protein [Desulfovibrio desulfuricans
           ND132]
          Length = 558

 Score = 93.0 bits (229), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 53/169 (31%), Gaps = 5/169 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG---AIKNDIDQKISFVA 60
           S   G++      +R++ + +N++N +T GF+   ++F ++     A  N + Q    V 
Sbjct: 6   SLFSGISGLTVHSERMTVIGNNLANVNTTGFKGAMMQFEDLASADFATVNGVGQVGRGVR 65

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRFKVTDDGSLVSAS 118
               Y     G+F ++    D A+ GD  F +          TR G F+   DG LV   
Sbjct: 66  VSTIYSDWGQGAFETSTEATDMAISGDGLFVVSPLGEDEKYYTRAGNFRFDSDGYLVDPH 125

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           G                                G               
Sbjct: 126 GYVLQGWEIERSTTTVTTTTSSTTETANSARIIGTPTNIRMENFQSEPN 174



 Score = 76.1 bits (185), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 27/83 (32%), Gaps = 5/83 (6%)

Query: 162 SVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHL 216
           +     G  R   +  +  +   P            T+    LE SN +   E   MI  
Sbjct: 473 TFTNQHGLRREGGNLFTETLESGPALTGQAGSTGKGTIDGNALEMSNVDMATEFVNMITT 532

Query: 217 TQKFNSITTLIDENEKSMLEAIR 239
            + F + T +I   +  + E I 
Sbjct: 533 QRGFQANTKVITTVDSMLGEVIS 555


>gi|315639349|ref|ZP_07894511.1| flagellar hook protein [Campylobacter upsaliensis JV21]
 gi|315480675|gb|EFU71317.1| flagellar hook protein [Campylobacter upsaliensis JV21]
          Length = 839

 Score = 93.0 bits (229), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 57/183 (31%), Gaps = 14/183 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G++   A +  +    +N+SN +T GF+  +  F  +                
Sbjct: 1   MMRSLWSGVSGMQAHQIAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATVPTENLG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106
             +  Q     +          GS  +T    D A+ GD +F +         LTR G F
Sbjct: 61  GQNPLQIGLGTSINSTTRIHSQGSVQTTDKNTDVAINGDGFFMVSDDGGLTRYLTRSGDF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           K+   G+ V+ +G        +   Q                       +T      +++
Sbjct: 121 KLDAAGNFVNNAGFVVQGWNINWDDQSIDTSRSPKNLFIDPGLHIPAAKSTEVAIKANLN 180

Query: 167 QGF 169
            G 
Sbjct: 181 SGL 183



 Score = 68.4 bits (165), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 14/94 (14%), Positives = 35/94 (37%), Gaps = 5/94 (5%)

Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNAN 205
           K   +A + + SV  + G      +          +      T     +K   LE SN +
Sbjct: 743 KTFAVAKIAMASVANNSGLEEIGGNLFKVTGNSGNIVVGEAGTGGRGEMKTSALEMSNVD 802

Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
               + Q+I + + + + +  I  +++ +   ++
Sbjct: 803 LSRSLTQLIVVQRGYQANSKTISTSDQMLNTLLQ 836


>gi|17989452|ref|NP_542085.1| flagellar basal-body rod protein FLGF [Brucella melitensis bv. 1
           str. 16M]
 gi|256043051|ref|ZP_05445996.1| flagellar basal body rod protein FlgF [Brucella melitensis bv. 1
           str. Rev.1]
 gi|260564283|ref|ZP_05834768.1| flagellar basal body rod protein [Brucella melitensis bv. 1 str.
           16M]
 gi|265989489|ref|ZP_06102046.1| flagellar basal body rod protein FlgF [Brucella melitensis bv. 1
           str. Rev.1]
 gi|17985331|gb|AAL54349.1| flagellar basal-body rod protein flgf [Brucella melitensis bv. 1
           str. 16M]
 gi|260151926|gb|EEW87019.1| flagellar basal body rod protein [Brucella melitensis bv. 1 str.
           16M]
 gi|263000158|gb|EEZ12848.1| flagellar basal body rod protein FlgF [Brucella melitensis bv. 1
           str. Rev.1]
          Length = 173

 Score = 93.0 bits (229), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 56/163 (34%), Positives = 86/163 (52%), Gaps = 4/163 (2%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
             S  +GL++ + LE+R+  +A N++N  TVGFR    KF  +V    +D    +SF  +
Sbjct: 3   NNSIYVGLSSLITLERRMDAIAHNVANASTVGFRGEGTKFDTIVSDKASD---DVSFATA 59

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
           GK Y+  E G  I T   LD A++GDAW +  +P+G + +RDGR K+   G  VS +G  
Sbjct: 60  GKSYIRTEAGPLIKTDNPLDVAVKGDAWMSFSTPQGQVYSRDGRMKMLSTGDPVSVTGNA 119

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
             LD+   PI +        +   G I Q G  +  +GLY++ 
Sbjct: 120 I-LDVGGAPIVLNPGGGAPRISSDGAIYQNGVQVGAIGLYTIP 161


>gi|146307869|ref|YP_001188334.1| flagellar hook protein FlgE [Pseudomonas mendocina ymp]
 gi|145576070|gb|ABP85602.1| flagellar basal body FlaE domain protein [Pseudomonas mendocina
           ymp]
          Length = 438

 Score = 93.0 bits (229), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 59/165 (35%), Gaps = 2/165 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61
           SFNIGL+   A  + L+   +N++N  T GF+  + +F++V  A       + + S V  
Sbjct: 2   SFNIGLSGLRAATKDLNVTGNNIANAGTAGFKQSRAEFADVYAASVLGTGSNPQGSGVLL 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
           G        G+   T   LD A+ G+ +F   +   I  TR G F    +G +V+  G  
Sbjct: 62  GDISQLFNQGNINYTQNALDLAINGNGFFVTSNNGEISYTRAGYFGTDREGFMVNNFGYR 121

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
                      +          +      +              +
Sbjct: 122 LQGYTVDANGNLQNGVVSDLRIQTANQEPRATANLAQTFNLNSNN 166



 Score = 65.7 bits (158), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 19/135 (14%), Positives = 40/135 (29%), Gaps = 9/135 (6%)

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169
                V+   +          ++I     IF     G+   +G+V+    L +    QG 
Sbjct: 306 ASSFAVNRVSQDGYTTGQLAGLEIDDTGVIFARYTNGQSKVQGQVV----LANFANVQGL 361

Query: 170 VRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224
                +    +         +        ++ G LEDSN     ++  +I   + + +  
Sbjct: 362 TPVGKTAWVQSFQSGEPVVGTPRAGTLGALQAGALEDSNVELSDQLVNLIVAQRNYQANA 421

Query: 225 TLIDENEKSMLEAIR 239
             I+         I 
Sbjct: 422 KTIETESAITQTIIN 436


>gi|26991077|ref|NP_746502.1| flagellar hook protein FlgE [Pseudomonas putida KT2440]
 gi|24986112|gb|AAN69966.1|AE016635_2 flagellar hook protein FlgE [Pseudomonas putida KT2440]
          Length = 440

 Score = 93.0 bits (229), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 4/159 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ----KISFV 59
           SFNIGL+   A  + L+   +N++N  T GF++ + +F++                 + V
Sbjct: 2   SFNIGLSGLYAANKALNVTGNNIANVATTGFKSSRAEFADQYSNSIRGTSAGKTVIGTGV 61

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119
            +         G+  +TG  LD A++G+ +FAL      I TR G F     G +V+ASG
Sbjct: 62  KTAAVSQLFTPGNINATGQALDMAIDGNGFFALNDNGSKIYTRAGAFYSDKAGYVVNASG 121

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158
                       +I Q        +   ++ K   + T 
Sbjct: 122 ANLQGYAVGEDGKIIQGILTDLQIDTSNLTPKPTSLITE 160



 Score = 68.7 bits (166), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 24/216 (11%), Positives = 51/216 (23%), Gaps = 18/216 (8%)

Query: 29  TDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA 88
            + V F++      + + A        I      +           +     + A+    
Sbjct: 236 VNAVPFKSDGTLDKDAMTAGDVAGGLSIGEDKIFQLNDWIPAQKNAAGEWSANGAIANAD 295

Query: 89  WFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI 148
              L+                      +       +D                       
Sbjct: 296 GVKLDMLGATQYNASSAEIAKTQDGFATGELSGLSIDQNG-------------YLFASFT 342

Query: 149 SQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLEDSN 203
           + K KVI  + + +    QG      +    +           +  +   +  G LEDSN
Sbjct: 343 NGKDKVIGQVAIANFANLQGLTPIGGTNWKESYASGVPVIGAPDTGTLGQISGGALEDSN 402

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +   E+  +I     + +    I      M   I+
Sbjct: 403 VDLTGELVNLIKAQSNYQANAKTISTESTIMQTIIQ 438


>gi|313497761|gb|ADR59127.1| FlgE [Pseudomonas putida BIRD-1]
          Length = 440

 Score = 93.0 bits (229), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 4/159 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ----KISFV 59
           SFNIGL+   A  + L+   +N++N  T GF++ + +F++                 + V
Sbjct: 2   SFNIGLSGLYAANKALNVTGNNIANVATTGFKSSRAEFADQYSNSIRGTSAGKTVIGTGV 61

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119
            +         G+  +TG  LD A++G+ +FAL      I TR G F     G +V+ASG
Sbjct: 62  KTAAVSQLFTPGNINATGQALDMAIDGNGFFALNDNGSKIYTRAGAFYSDKAGYVVNASG 121

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158
                       +I Q        +   ++ K   + T 
Sbjct: 122 ANLQGYAVGEDGKIIQGILTDLQIDTSNLTPKPTSLITE 160



 Score = 68.7 bits (166), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 24/216 (11%), Positives = 51/216 (23%), Gaps = 18/216 (8%)

Query: 29  TDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA 88
            + V F++      + + A        I      +           +     + A+    
Sbjct: 236 VNAVPFKSDGTLDKDAMTAGDVAGGLSIGEDKIFQLNDWIPAQKNAAGEWSANGAIANAD 295

Query: 89  WFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI 148
              L+                      +       +D                       
Sbjct: 296 GVKLDMLGATQYNASSAEIAKTQDGFATGELSGLSIDQNG-------------YLFASFT 342

Query: 149 SQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLEDSN 203
           + K KVI  + + +    QG      +    +           +  +   +  G LEDSN
Sbjct: 343 NGKDKVIGQVAIANFANLQGLTPIGGTNWKESYASGVPVIGAPDTGTLGQISGGALEDSN 402

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +   E+  +I     + +    I      M   I+
Sbjct: 403 VDLTGELVNLIKAQSNYQANAKTISTESTIMQTIIQ 438


>gi|269836573|ref|YP_003318801.1| hypothetical protein Sthe_0541 [Sphaerobacter thermophilus DSM
           20745]
 gi|269785836|gb|ACZ37979.1| protein of unknown function DUF1078 domain protein [Sphaerobacter
           thermophilus DSM 20745]
          Length = 413

 Score = 92.6 bits (228), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 30/140 (21%), Positives = 54/140 (38%), Gaps = 14/140 (10%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------- 48
             S    ++   A +  L  + +N++N  T GF+  +V+F +V+                
Sbjct: 3   NRSMASAVSGLKAYQTWLDVIGNNIANLATPGFKASRVRFEDVMSHTLRGASVPDPAQGR 62

Query: 49  -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107
              +  Q    V +         G+  +TG     A++G+ +F +        TRDG F 
Sbjct: 63  GGRNPAQVGLGVLAAGIDTDYAPGTPTATGKMSHMAIQGEGYFVVADGFRTYYTRDGSFD 122

Query: 108 VTDDGSLVSASGKYPVLDMA 127
           +  DG LV+ S    V+   
Sbjct: 123 LGIDGRLVNPSTGLYVMGWQ 142



 Score = 82.2 bits (201), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 13/90 (14%), Positives = 35/90 (38%), Gaps = 5/90 (5%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMYE 209
           +  + L +     G ++   + +SP+                  +  G+LE SN +   E
Sbjct: 321 LGQIALATFANPGGLLKEGQNLLSPSPNSGQAVIGTPVTGGRGQIAAGYLEMSNVDLAEE 380

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              MI   + F + + ++  +++ + + + 
Sbjct: 381 FTNMILAERGFQANSRVVTTSDEVLQDLVN 410


>gi|256829395|ref|YP_003158123.1| hypothetical protein Dbac_1614 [Desulfomicrobium baculatum DSM
           4028]
 gi|256578571|gb|ACU89707.1| protein of unknown function DUF1078 domain protein
           [Desulfomicrobium baculatum DSM 4028]
          Length = 513

 Score = 92.6 bits (228), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 66/197 (33%), Gaps = 5/197 (2%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI---DQKISFV 59
           +S  IG    +A ++ ++ ++DN++N  TVGF++  + F+ ++          +Q    V
Sbjct: 5   SSLYIGTTGIMAQQKNMAVISDNIANVSTVGFKSSHMIFNTLMSQQMGSASVSNQVGQGV 64

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP--RGIILTRDGRFKVTDDGSLVSA 117
                     +G+   T T  D ++ G  +F +          TR G F+   +G L   
Sbjct: 65  GVSSILYDMSLGALEPTNTATDISISGKGFFIVSPNGSSDQHYTRAGNFRFDAEGYLRDP 124

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177
            G             +     I           +  +    G  S   +   +R   +  
Sbjct: 125 QGNILQGYRMPAESILDTAPVIPPAASAPITDIRLDMQDGGGPVSEPEATTEMRMMINLD 184

Query: 178 SPNIPPTPLEDLSGVTV 194
           S +   +         +
Sbjct: 185 SSSQERSTSTTSPFTAL 201



 Score = 72.6 bits (176), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 16/94 (17%), Positives = 35/94 (37%), Gaps = 5/94 (5%)

Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNAN 205
           + + +  + +      QG  R   +  S       +           +V    LE+SN +
Sbjct: 417 QNQGLYKIPMADFINPQGLFREGGNLFSATKDSGAVSVGWAGEGRLGSVITSSLENSNVD 476

Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              E   MI   + F++ + +I   ++ +  AI+
Sbjct: 477 LATEFVNMIITQKGFDANSKVITTGDQVVQTAIQ 510


>gi|157364671|ref|YP_001471438.1| hypothetical protein Tlet_1820 [Thermotoga lettingae TMO]
 gi|157315275|gb|ABV34374.1| protein of unknown function DUF1078 domain protein [Thermotoga
           lettingae TMO]
          Length = 631

 Score = 92.6 bits (228), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 42/207 (20%), Positives = 75/207 (36%), Gaps = 13/207 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G+A     +  +  V +N++N +TVGF+  +V F   +               
Sbjct: 1   MMRSMFSGVAGMRNFQYAIDVVGNNIANVNTVGFKGSRVTFQTALLQTMKAARSPQNNIG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
             +  Q                GSF +TG + D A++GD +F L        TR G   V
Sbjct: 61  GTNPIQIGLGSQLATIDKIMTQGSFENTGNKTDLAIQGDGFFVLSDGSQYYYTRAGALSV 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
             +G+L+ +S  Y V    ++         +      G+I     +       +    +G
Sbjct: 121 DTNGTLIQSSTGYKVQGWRAIQDPATGTRYVDTNQPIGDIVISAGMTMPANATTSATMEG 180

Query: 169 FVRRENSGISPNIPPTPLEDLSGVTVK 195
            +   + G +P       ED +  +V+
Sbjct: 181 NLNS-SVGPTPFSMTVTDEDGNEHSVR 206



 Score = 75.7 bits (184), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 31/92 (33%), Gaps = 5/92 (5%)

Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANS 206
             ++  + L   +   G     +S    +      +          T+  G LE SN + 
Sbjct: 536 TDILGQVALAVFNNPAGLTEIGDSLYITSSNSGLAQIGTAGSGGRGTLIPGALEMSNVDL 595

Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
             E  +MI   + F +   +I   +  + E +
Sbjct: 596 AEEFTRMIIAQRGFQANARVITTADTILGELV 627


>gi|54307270|ref|YP_128290.1| flagellar hook protein FlgE [Photobacterium profundum SS9]
 gi|46911690|emb|CAG18488.1| Hypothetical flagellar hook protein FlgE [Photobacterium profundum
           SS9]
          Length = 472

 Score = 92.6 bits (228), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 78/169 (46%), Gaps = 2/169 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           S NIG++  +A  +++++++ N++N  T G+++ + +F ++          +++ V    
Sbjct: 2   SMNIGMSGLIATSEQMNSISHNIANVGTAGYKSSRTEFQDIYAPEFGGG--EMNGVEVAA 59

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPV 123
              S + G+   TG   D A+ G+ +F +E+    + TR+G F +  DG+LV++ G +  
Sbjct: 60  IRQSFKNGTTTPTGRNGDLAINGEGFFMVENKGQQMFTRNGVFNLDKDGNLVASDGSHLQ 119

Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172
               +   QI          E G++  +      M +     S   V +
Sbjct: 120 GYGVTGTGQIQTGTITDLTVETGDMPARSSTKVNMEVNLDANSLAIVPK 168



 Score = 66.4 bits (160), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 15/100 (15%), Positives = 35/100 (35%), Gaps = 5/100 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLED 201
             + + KV   + L      +G  +  N+  + +         +  T     V+ G  E+
Sbjct: 373 YSNGQTKVQGQVSLARFPNQEGLQQAGNTRWTQSFSSGAALVGAAGTGQLGNVRTGMYEN 432

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           SN +   EM  ++     + +    I   ++      +N+
Sbjct: 433 SNVDLSSEMVNLMSAQSNYQANAKTIKVAQEMTQILFQNL 472


>gi|150021173|ref|YP_001306527.1| hypothetical protein Tmel_1293 [Thermosipho melanesiensis BI429]
 gi|149793694|gb|ABR31142.1| protein of unknown function DUF1078 domain protein [Thermosipho
           melanesiensis BI429]
          Length = 705

 Score = 92.6 bits (228), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 68/190 (35%), Gaps = 14/190 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G+      +Q +  V +N++N  T+GF+  +V ++     +            
Sbjct: 1   MIRSIYSGVTGLQGFQQAIDVVGNNIANVSTIGFKASRVTYATTFSQVLELSKRATELTG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFK 107
             +  Q    V           GSF +TG + D A+ GD +F L         TR G F 
Sbjct: 61  GTNPKQIGYGVKVASIDKIMSQGSFQNTGKKTDLAIRGDGFFILRDGVGKTYYTRAGNFD 120

Query: 108 VTDDGSLVSAS-GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           +  +G+++  + G      +A    +  ++    N          G  +A     S+ ++
Sbjct: 121 LDVNGTIIQPTSGLKLQGWVAEPDPESGKRFVDTNKPISDIQISAGLSMAAKKTTSMTVA 180

Query: 167 QGFVRRENSG 176
                R   G
Sbjct: 181 NNLDARVGPG 190



 Score = 82.2 bits (201), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 13/129 (10%), Positives = 36/129 (27%), Gaps = 5/129 (3%)

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
           ++       +  +                    +     +  + L   +   G +   NS
Sbjct: 574 TSDAYVVNQNGNAQGTLESFSIAENGDIIGTFSNGLTDKLGKVALAIFNNPAGLLEAGNS 633

Query: 176 GISPNIPP-----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
             + +                  +  G LE SN +   E  ++I   + F +   ++   
Sbjct: 634 LYTKSANSGSAIIRQPGFGGAGALISGALEMSNVDLSEEFTKLIIAQRGFQANARVVTTA 693

Query: 231 EKSMLEAIR 239
           ++ + E + 
Sbjct: 694 DQILQEVVN 702


>gi|296274021|ref|YP_003656652.1| fagellar hook-basal body protein [Arcobacter nitrofigilis DSM 7299]
 gi|296098195|gb|ADG94145.1| fagellar hook-basal body protein [Arcobacter nitrofigilis DSM 7299]
          Length = 783

 Score = 92.6 bits (228), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 70/203 (34%), Gaps = 19/203 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +   G++   A ++ L   + N++N +T+G++  ++ F++ +       D+      
Sbjct: 1   MIGALWTGISGLSAQQKALDNESHNIANVNTIGYKASRISFADQMYQ-----DKIGKGAK 55

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-----GIILTRDGRFKVTDDGSLV 115
                         STG   D AL+   +FA+ +           TR G F++ D+G+L 
Sbjct: 56  VQDAEKIYTPSGTKSTGVAYDMALKDHGFFAVSNKTSTGTSETYYTRAGNFRMGDNGTLQ 115

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
            A G        S            N       +    +IAT  +      + +  +   
Sbjct: 116 DAGGNEVQGWAMSPIT--ADDIVSTNANVNVFTNDYSNLIATDIIKHGTYIESYSAKMTD 173

Query: 176 GISPNIPPTPLEDLSGVTVKRGF 198
               N           V+V  G+
Sbjct: 174 FDQVN-------KGDDVSVYSGY 189



 Score = 62.6 bits (150), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 31/91 (34%), Gaps = 4/91 (4%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSG----ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMY 208
            +I  + +   +  +G +   ++          P   + +     +  G LE S AN   
Sbjct: 690 FIIGQVSVALFNNERGLLAVGDNLLKKTTESGEPTYNINNDRTSEIAGGNLELSGANLSE 749

Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +  ++   + F +    I   +  +   I+
Sbjct: 750 SLVNLMVFQRAFEANAKSITTADALLTTLIQ 780


>gi|119775450|ref|YP_928190.1| flagellar hook protein FlgE [Shewanella amazonensis SB2B]
 gi|119767950|gb|ABM00521.1| flagellar hook protein FlgE [Shewanella amazonensis SB2B]
          Length = 453

 Score = 92.6 bits (228), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 41/184 (22%), Positives = 74/184 (40%), Gaps = 5/184 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61
           SFNI L+   A ++ L+T A+N++N +T GF+  + +F++V  A    N   Q    V +
Sbjct: 2   SFNIALSGIAAAQKDLNTTANNIANVNTTGFKESRAEFADVYAASIFSNSKTQVGGGVTT 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII---LTRDGRFKVTDDGSLVSAS 118
            +       GS   T   LD A+ G  +F   +         TR G FKV  +  LV ++
Sbjct: 62  TQVAQQFHQGSLQFTSNALDLAISGGGFFVTSADPSARDYSFTRAGAFKVDSNNYLVDSA 121

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178
           G +                       +   +    V+       ++++ G   ++ +   
Sbjct: 122 GNFLQTFPVDKFGNSTSVSLTTTRPVQIPDTAGSPVMTENVGVQMNLNAGEKTKDPAAFD 181

Query: 179 PNIP 182
           P+ P
Sbjct: 182 PDDP 185



 Score = 66.0 bits (159), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 29/91 (31%), Gaps = 5/91 (5%)

Query: 154 VIATMGLYSVDMSQGFVRRENSGISP-----NIPPTPLEDLSGVTVKRGFLEDSNANSMY 208
            +  + L      QG  +  N+                   +   ++   LE SN +   
Sbjct: 361 PLGRVALVRFANEQGLTQVGNTSWKESLASGTALAGEANSGTFGAIRSAALEQSNVDLTT 420

Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           E+  +I   + F + +  ++ N       ++
Sbjct: 421 ELVDLISAQRNFQANSRTLEVNNTLQQTILQ 451


>gi|225850267|ref|YP_002730501.1| flagellar basal body and hook protein FlgE [Persephonella marina
           EX-H1]
 gi|225644919|gb|ACO03105.1| flagellar basal body and hook protein FlgE [Persephonella marina
           EX-H1]
          Length = 540

 Score = 92.6 bits (228), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 65/163 (39%), Gaps = 8/163 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  SF  G A   A +  LS ++DN++N +T+GF+  +V F +++ +             
Sbjct: 1   MIQSFYTGNAGLNANKNWLSVISDNIANVNTIGFKAERVNFEDLISSSLTTFANNSPKNM 60

Query: 56  --ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDG 112
                   G        G+ ++T T  D AL+G+ +F +   +     TR G+F+   +G
Sbjct: 61  EIGGGSFVGSTTKDFSQGALMNTNTPTDLALDGEGFFMVRDAQDVTYYTRAGQFRTDANG 120

Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI 155
            L++ +G   +         I       N+          K+ 
Sbjct: 121 DLINLNGMKLLGWQLDDAGNIAGAIGAINIPNDMPPHVTTKLA 163



 Score = 77.2 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 15/87 (17%), Positives = 35/87 (40%), Gaps = 3/87 (3%)

Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPTPL---EDLSGVTVKRGFLEDSNANSMYEMGQ 212
           A + + + +  +  +R+ N+   PN                ++ GFLE SN +   E   
Sbjct: 451 ARIAIATFNDKEILIRKGNNLFLPNSQTYTPIIVPGGVISKIRGGFLELSNVDISREFIN 510

Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIR 239
           +I   + + +    I  +++ + E + 
Sbjct: 511 LITAQRAYQANARTITTSDQVLQETMN 537


>gi|149174025|ref|ZP_01852653.1| flagellar basal-body rod protein FlgG [Planctomyces maris DSM 8797]
 gi|148847005|gb|EDL61340.1| flagellar basal-body rod protein FlgG [Planctomyces maris DSM 8797]
          Length = 542

 Score = 92.6 bits (228), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 75/219 (34%), Gaps = 19/219 (8%)

Query: 14  ALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----------ISFVASGK 63
           AL      + +N++N  T+GF+ + V+F  +          +                 +
Sbjct: 274 ALRLSRDVIVNNIANAGTIGFKRLYVEFESLPYEYVKTPASEEAETEPPIAVGMGSQVLQ 333

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV--SASGKY 121
             +S+  G  + TG ELD A+EG  +  +        TR GR    +D  L    +   Y
Sbjct: 334 TRISQTSGELLKTGRELDIAIEGQGFLQVRLGETTAFTRTGRLIFDEDRRLCIRGSQHNY 393

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGK--VIATMGLYSVDMSQGFVRRENSGISP 179
            ++    +P +        +      ++   +   +  + +           RE+   + 
Sbjct: 394 LIVPEIKLPAEAHSIQISESGIVTALLADVAEEVTVGELQIACFTDPSELFPRESCLFTT 453

Query: 180 NIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQM 213
                    L+        V+ G LE SN +   E+ Q+
Sbjct: 454 TPRAGAARVLTPGAKGAGLVRSGVLEASNVSITEELEQL 492


>gi|57504594|ref|ZP_00370706.1| flagellar hook protein FlgE [Campylobacter coli RM2228]
 gi|57019489|gb|EAL56183.1| flagellar hook protein FlgE [Campylobacter coli RM2228]
          Length = 845

 Score = 92.6 bits (228), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 59/183 (32%), Gaps = 14/183 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G++   A +  +    +N+SN +T GF+  +  F  +                
Sbjct: 1   MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTKGFKYSRADFGTMFSQTVKIATAPTDGRG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106
            ++  Q    V+          G   +T    D A+ GD +F +         LTRDG F
Sbjct: 61  GSNPLQIGLGVSVSSTTRIHSQGPVQTTNKNTDVAINGDGFFMVSDDGGLTRYLTRDGDF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           K+   G+ V+ +G        +   Q                       +T      +++
Sbjct: 121 KLDAYGNFVNNAGFVVQGWNINWDNQTIDSSRSPQNIFIDPGMHIPAAKSTEVAIKANLN 180

Query: 167 QGF 169
            G 
Sbjct: 181 SGL 183



 Score = 73.4 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 17/144 (11%), Positives = 46/144 (31%), Gaps = 5/144 (3%)

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           T      +    S  + +G+      +        + +          + K   +A + +
Sbjct: 699 TSGSNDGLVSSNSASTLTGQATDGYTSGNLKPDAIRVDDKGNILGEFTNGKTFAVAKIAM 758

Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIH 215
            SV  + G      +          +      T     +K   LE SN +    + ++I 
Sbjct: 759 ASVANNSGLEEIGGNLFKVTANSGAIVVGEAGTGGRGEMKTSALEMSNVDLSRSLTELII 818

Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239
           + + + + +  I  +++ +   I+
Sbjct: 819 IQRGYQANSKTISTSDQMLQTLIQ 842


>gi|86356330|ref|YP_468222.1| flagellar hook protein FlgE [Rhizobium etli CFN 42]
 gi|86280432|gb|ABC89495.1| flagellar hook protein [Rhizobium etli CFN 42]
          Length = 434

 Score = 92.6 bits (228), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 43/183 (23%), Positives = 74/183 (40%), Gaps = 10/183 (5%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           S    ++   A   RLSTV+DN++N +T G++ +   FS +V       +     V +  
Sbjct: 6   SMKTAVSGMNAQANRLSTVSDNIANVNTTGYKAVSTSFSSLVLPSSGG-NYNSGGVQTSV 64

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGKYP 122
                + G    T +  D A+ GD +F ++ P G  +LTR G F+  D+G+LV+A+G   
Sbjct: 65  RQAVSDQGDISYTTSTTDLAISGDGFFIVQGPDGTPVLTRAGDFQKDDEGNLVNAAGFQL 124

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
           +                  V   G        +   GL ++  + G  +      +   P
Sbjct: 125 MGYSYDS--------GAPAVVVNGFDGLVPVNVNQEGLTAIASTSGVFKGNLDSGANIAP 176

Query: 183 PTP 185
             P
Sbjct: 177 VAP 179



 Score = 74.1 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 17/121 (14%), Positives = 35/121 (28%), Gaps = 1/121 (0%)

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178
                  +  V I               +   +  +        + +  G V   N    
Sbjct: 312 NGQAASPVKDVTIDGDGIVYAKYEDGSTKPLYRIPLANVASPDKLTLMSGNVYSANGQSG 371

Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
             +   P  +    T+K G LE SN +   E+ +MI   + + + + +       M   +
Sbjct: 372 VTVTGFPQTNG-LGTIKSGALEGSNVDLAGELTEMIEAQRSYTANSKVFQTGSDIMDVLV 430

Query: 239 R 239
            
Sbjct: 431 N 431


>gi|319790416|ref|YP_004152049.1| flagellar hook-basal body protein [Thermovibrio ammonificans HB-1]
 gi|317114918|gb|ADU97408.1| flagellar hook-basal body protein [Thermovibrio ammonificans HB-1]
          Length = 522

 Score = 92.6 bits (228), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 64/162 (39%), Gaps = 8/162 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-------D 53
           M  SF        A ++ LS ++DN++N +TVGF+  +  F +++               
Sbjct: 1   MLQSFYTAFTGLTADKRWLSIISDNIANVNTVGFKAERAVFEDLLARSLTTFKNGAPVNT 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDG 112
           +    V           G+F++T   LD AL+G+ +F +   +G    TR+G F++  +G
Sbjct: 61  EIGGGVFVSATVKDFSQGTFMNTNNPLDLALDGEGFFMVRDNQGLTYYTRNGEFRLDANG 120

Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV 154
            L++  G      M      +        V    +      +
Sbjct: 121 DLINMLGMKVQGWMLDDNGNMAGAISNITVPMSMDPKVTKNI 162



 Score = 75.7 bits (184), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 36/88 (40%), Gaps = 3/88 (3%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTP---LEDLSGVTVKRGFLEDSNANSMYEMG 211
           IA + + +    +  VR+ +    PN+       +       V+ G LE SN +   E  
Sbjct: 432 IARLAIATFKDKEMLVRKGSWLYVPNVQTFTPVIMPGGVISKVRSGMLEMSNVDIANEFI 491

Query: 212 QMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +I   + + +   +I  +++ + E + 
Sbjct: 492 NLITAQRSYQANARVITTDDQILQETMN 519


>gi|327398496|ref|YP_004339365.1| flagellar hook-basal body protein [Hippea maritima DSM 10411]
 gi|327181125|gb|AEA33306.1| flagellar hook-basal body protein [Hippea maritima DSM 10411]
          Length = 589

 Score = 92.6 bits (228), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 62/175 (35%), Gaps = 12/175 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK------NDIDQ 54
           M  +           +  + ++ +N++N +T+G++  +  F+ ++   +       +  Q
Sbjct: 1   MIRALYTSSNGLFEQQLGVDSITNNIANVNTIGYKKTRPTFASLLYQTQKLGMPGENPMQ 60

Query: 55  KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-----ILTRDGRFKVT 109
               V           G+ I+   + D A+EG  +F L  P        + TR G F   
Sbjct: 61  IGLGVKLQSTDTIMSEGTLITGNKDTDLAIEGKGFFTLLDPSSKDSASYLFTRAGDFSFD 120

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
            DG+LV+ +G   V    +   Q      I      G  +   + I       V 
Sbjct: 121 ADGNLVNPNGYMVVGW-LAEQSQQGTGYYIPEDPTTGLPTGTIQPINISSYEDVP 174



 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 15/139 (10%), Positives = 37/139 (26%), Gaps = 12/139 (8%)

Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172
             + +   +   D +   I      +          +     IA + +      QG  R 
Sbjct: 448 FAMDSDTSFQDQDGSHSGILQKVFVDRDGNIMGTYSNGNSYSIAKLAISKFMNPQGLKRE 507

Query: 173 ENSGISPNIPPTPLE------------DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
             +           +            +     +    LE SN +       +I   + F
Sbjct: 508 GKTMFKTTPNADSEDVLSSYGFIGVANEGGRGMILSNHLEASNVDLGEAFVNLIEYQRGF 567

Query: 221 NSITTLIDENEKSMLEAIR 239
            + +  +   ++ +  AI+
Sbjct: 568 EANSKGVTTADQLLQTAIQ 586


>gi|330502734|ref|YP_004379603.1| flagellar hook protein FlgE [Pseudomonas mendocina NK-01]
 gi|328917020|gb|AEB57851.1| flagellar hook protein FlgE [Pseudomonas mendocina NK-01]
          Length = 456

 Score = 92.6 bits (228), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 39/186 (20%), Positives = 70/186 (37%), Gaps = 6/186 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61
           SFNIGL+   A    L+   +N++N  T GF+  + +F+++  +       + + S V  
Sbjct: 2   SFNIGLSGLRAATSDLNVTGNNIANAGTAGFKQSRAEFADLYASSMLGTGKNPQGSGVLL 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
                    G+   T   LD A+ G+ +F   +   +  TR G F    DG +V+  G  
Sbjct: 62  ADVAQLFNQGNINYTQNALDMAINGNGFFMTSNNGEMSYTRSGYFGTDRDGYIVNNFGYR 121

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
                A     I        V    +  +    +       ++++   VR  N+G     
Sbjct: 122 LQGYAADDSGNILPVQSDLRVSAGQQEPKATTTVTQ----RINLNSNAVRPANAGTMAAP 177

Query: 182 PPTPLE 187
              P +
Sbjct: 178 TFDPSD 183



 Score = 64.9 bits (156), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 25/200 (12%), Positives = 53/200 (26%), Gaps = 10/200 (5%)

Query: 45  VGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDG 104
           + +   +       + +G       +        E D    G                 G
Sbjct: 260 LASTPPNPALDAPAIPTGTPNGIFALAEADWVPAEKDPVNPGTMVANGADSEAFTFDMRG 319

Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
             +       V+A  +          I++     IF     G+   +G+V+    L +  
Sbjct: 320 STQYAAS-FGVNAVSQDGYTTGQLAGIEVDDTGIIFARYTNGQSKVQGQVL----LANFA 374

Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQK 219
             QG      +    +         +        ++ G LEDSN     ++  +I   + 
Sbjct: 375 NVQGLSPVGKTAWVQSFESGEPVIGTPRSSTLGALQAGALEDSNVELSDQLVNLIVAQRN 434

Query: 220 FNSITTLIDENEKSMLEAIR 239
           + +    I+         I 
Sbjct: 435 YQANAKTIETESAITQTIIN 454


>gi|299531286|ref|ZP_07044696.1| flagellar hook protein FlgE [Comamonas testosteroni S44]
 gi|298720693|gb|EFI61640.1| flagellar hook protein FlgE [Comamonas testosteroni S44]
          Length = 422

 Score = 92.6 bits (228), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 38/193 (19%), Positives = 66/193 (34%), Gaps = 7/193 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN--DIDQKISFVAS 61
            F  GL+   A  + L  +  N++N++T GF+  +  F+E+V +             V  
Sbjct: 2   GFQQGLSGLNAASKNLDVIGHNIANSNTTGFKASRADFAEMVASAIGSASGQSSGIGVNV 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASGK 120
                    GS  STG  LD A+ G+ +F ++     I  TR G F +  +G+L +    
Sbjct: 62  ASVSQQFRQGSITSTGNNLDIAINGNGFFVVKQSDGSIAYTRAGNFGLDKEGNLKTVDND 121

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
             +  +        Q                G+ I       V++      R  +     
Sbjct: 122 NVMGYVVDPSTGKIQSGATPVPMSF----PTGQPIPAKQTSKVNVELNLDARATAAAGDA 177

Query: 181 IPPTPLEDLSGVT 193
               P+      T
Sbjct: 178 TATPPVAATPRAT 190



 Score = 78.4 bits (191), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 13/89 (14%), Positives = 32/89 (35%), Gaps = 5/89 (5%)

Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEM 210
             + L +   +QG     N+         P      +  +  +++ G LE+SN +   E+
Sbjct: 332 GQIALAAFTNTQGLGSIGNNKWVATSDSGPALNGSAQTGTFGSLQSGALEESNVDLTAEL 391

Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             M+   + + +    I   ++     + 
Sbjct: 392 VNMMTAQRSYQANAQTIKTQDQVFSTLVN 420


>gi|289670506|ref|ZP_06491581.1| flagellar hook protein FlgE [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 142

 Score = 92.6 bits (228), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 57/128 (44%), Gaps = 2/128 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--ISFVAS 61
            FN  L+   A    L+  ++N++N +T GF+  + +F+++  +    + +    S V  
Sbjct: 2   GFNTSLSGINAANADLNVTSNNIANVNTTGFKESRAEFADMFQSTSYGLSRNAVGSGVRV 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
                    G+   TG  LD A+ G+ +F + S    + TR G F+   +G +V+  G  
Sbjct: 62  SNVAQQFSQGNIDPTGRSLDLAISGEGFFTVSSNGAKMYTRAGNFQTDANGYVVNPQGAR 121

Query: 122 PVLDMASV 129
             +   + 
Sbjct: 122 LQVFAPNP 129


>gi|229090715|ref|ZP_04221948.1| Flagellar hook protein FlgE [Bacillus cereus Rock3-42]
 gi|228692657|gb|EEL46383.1| Flagellar hook protein FlgE [Bacillus cereus Rock3-42]
          Length = 437

 Score = 92.6 bits (228), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 71/222 (31%), Gaps = 20/222 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49
           M  +    +    A +  LS  ++N++N  TVG++  K  F +++               
Sbjct: 1   MIKALYTSITGMNAAQNALSVTSNNIANAQTVGYKKQKAIFDDLLYNNTVGSRGDGAYAG 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF--ALESPRGIILTRDGRFK 107
            +     + V           GS   T  +++ A+EG+  F     +   +  TR G F 
Sbjct: 61  TNPKSIGNGVKFSGTSTDFSDGSITLTSDKMETAIEGNGLFLVGDRNGGNVEYTRKGSFS 120

Query: 108 VTDDGSLVSASGKYPVL-------DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           V+ D  + +  G+Y +               +             G  + K  +   +  
Sbjct: 121 VSKDSYVTNTGGQYVLGYGVKTGTQEVDFSSRPSPIHIPMGSAVGGIQTDKATIGGNLPR 180

Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDS 202
               +S  F   +  G S  +     +     TV    +E  
Sbjct: 181 NQNALSHEFTVFDAEGNSLTLRVNIKQKTESETVDGKVVEKP 222



 Score = 69.9 bits (169), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 18/144 (12%), Positives = 40/144 (27%), Gaps = 9/144 (6%)

Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
                   G  +S +         +    I     +      G +    KV+  + + + 
Sbjct: 298 SGLTNYPTGKTLSTTEVTGRPAAIANDYSISDGGFVMMKYSDGSM----KVVGQLAVATF 353

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
             S G ++  N                        V+    E SN +   E   ++   +
Sbjct: 354 PNSGGLMKTGNGNYVATPSAGIPGIGVAGENGAGNVRGSAKESSNVDLSVEFVDLMLYQR 413

Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242
            F     +I  +++ + E +  I 
Sbjct: 414 GFQGNAKVIKVSDEVLNEVVNLIR 437


>gi|217077695|ref|YP_002335413.1| flagellar hook protein FlgE [Thermosipho africanus TCF52B]
 gi|217037550|gb|ACJ76072.1| flagellar hook protein FlgE [Thermosipho africanus TCF52B]
          Length = 704

 Score = 92.6 bits (228), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 39/188 (20%), Positives = 70/188 (37%), Gaps = 14/188 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G+      +Q +  V +N++N  T+GF+  +V ++     +            
Sbjct: 1   MIRSIYSGVTGLQGFQQAIDVVGNNIANVSTIGFKASRVTYATTFSQVLELSKRATELTG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFK 107
             +  Q    V           GSF +TG + D A++GD +F L+     I  TR G F 
Sbjct: 61  GTNPKQIGYGVKVASIDKIMSQGSFQNTGKKTDLAIQGDGFFILKDGSGKIYYTRAGNFD 120

Query: 108 VTDDGSLVS-ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           +  +G+LV  +SG      +A    +  ++    N          G  +A      + ++
Sbjct: 121 LDVNGTLVQASSGLKLQGWVAEPDPESGKRFVDTNKPISDIQISAGLSMAAKKTSYMTVA 180

Query: 167 QGFVRREN 174
                R  
Sbjct: 181 NNLDARVG 188



 Score = 82.6 bits (202), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 13/129 (10%), Positives = 37/129 (28%), Gaps = 5/129 (3%)

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
           ++       +  +                    +     +  + L   +   G +   NS
Sbjct: 573 TSDAYVTEQNGNAQGTLESFSIAENGDIIGTFSNGLTDKLGKVALAIFNNPAGLLEAGNS 632

Query: 176 GISPNIPP-----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
             + +                 ++  G LE SN +   E  ++I   + F +   ++   
Sbjct: 633 LYTESANSGGAIIRQPGFGGSGSLISGALEMSNVDLSEEFTKLIIAQRGFQANARVVTTA 692

Query: 231 EKSMLEAIR 239
           ++ + E + 
Sbjct: 693 DQILQEVVN 701


>gi|317129200|ref|YP_004095482.1| flagellar hook-basal body protein [Bacillus cellulosilyticus DSM
           2522]
 gi|315474148|gb|ADU30751.1| flagellar hook-basal body protein [Bacillus cellulosilyticus DSM
           2522]
          Length = 397

 Score = 92.2 bits (227), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 30/136 (22%), Positives = 56/136 (41%), Gaps = 12/136 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55
           M  +   G+    + + +L  V +N++N +T GF+  +V F ++V    +          
Sbjct: 1   MIRAMYAGIGGMKSFQTKLDVVGNNIANVNTSGFKKGRVTFQDLVSQQMSGAATPTDNRG 60

Query: 56  -------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                      + G        GS  +TG +LD  + GD +F +        +R G F +
Sbjct: 61  GINPMQVGLGTSMGSIDTIHTQGSLQTTGRDLDIGITGDGFFIVNDGGQSYYSRAGNFYL 120

Query: 109 TDDGSLVSASGKYPVL 124
            ++G LV+A+G     
Sbjct: 121 DENGDLVNANGLRVQG 136



 Score = 76.1 bits (185), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 36/92 (39%), Gaps = 5/92 (5%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSM 207
           +++  + L + +   G  +  N+    +      +     D     +    LE SN +  
Sbjct: 303 RLLGQIALATFNNPGGLSKSGNNLYMVSNNSGNPQVGLAGDGGRGMLTGASLEMSNVDLS 362

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            E  +MI   + F + T +I  +++ + E + 
Sbjct: 363 EEFTEMIVAQRGFQANTRMITTSDEILQELVN 394


>gi|218902868|ref|YP_002450702.1| putative flagellar hook protein FlgE [Bacillus cereus AH820]
 gi|218535884|gb|ACK88282.1| putative flagellar hook protein FlgE [Bacillus cereus AH820]
          Length = 437

 Score = 92.2 bits (227), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 71/222 (31%), Gaps = 20/222 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49
           M  +    +    A +  LS  ++N++N  TVG++  K  F +++               
Sbjct: 1   MIKALYTSITGMNAAQNALSVTSNNIANAQTVGYKKQKAIFDDLLYNNTVGSRGDGAYAG 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF--ALESPRGIILTRDGRFK 107
            +     + V           GS   T  +++ A+EG+  F     +   +  TR G F 
Sbjct: 61  TNPKSIGNGVKFSGTSTDFSDGSITLTSDKMETAIEGNGLFLVGDRNAGNVEYTRKGSFG 120

Query: 108 VTDDGSLVSASGKYPVL-------DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           V+ D  + +  G+Y +               +             G  + K  +   +  
Sbjct: 121 VSKDNYVTTTGGQYVLGYGVKTGTQEIDFSSRPSPIHIPMGSAVGGIQTDKATIGGNLPR 180

Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDS 202
               +S  F   +  G S  +     +     TV    +E  
Sbjct: 181 NQNALSHEFTVFDAEGNSLTLRVNIKQKTESETVDGKVVEKP 222



 Score = 69.5 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 18/144 (12%), Positives = 40/144 (27%), Gaps = 9/144 (6%)

Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
                   G  +S +         +    I     +      G +    KV+  + + + 
Sbjct: 298 SGLTNYPTGKTLSTTEVTGRPAAIANDYSISDGGFVMMKYSDGSM----KVVGQLAVATF 353

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
             S G ++  N                        V+    E SN +   E   ++   +
Sbjct: 354 PNSGGLMKTGNGNYVATPSAGIPGIGVAGENGAGNVRGSAKESSNVDLSVEFVDLMLYQR 413

Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242
            F     +I  +++ + E +  I 
Sbjct: 414 GFQGNAKVIKVSDEVLNEVVNLIR 437


>gi|52143704|ref|YP_083124.1| flagellar hook protein FlgE [Bacillus cereus E33L]
 gi|228926789|ref|ZP_04089857.1| Flagellar hook protein FlgE [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|229121305|ref|ZP_04250536.1| Flagellar hook protein FlgE [Bacillus cereus 95/8201]
 gi|51977173|gb|AAU18723.1| flagellar hook protein [Bacillus cereus E33L]
 gi|228662150|gb|EEL17759.1| Flagellar hook protein FlgE [Bacillus cereus 95/8201]
 gi|228832902|gb|EEM78471.1| Flagellar hook protein FlgE [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 437

 Score = 92.2 bits (227), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 71/222 (31%), Gaps = 20/222 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49
           M  +    +    A +  LS  ++N++N  TVG++  K  F +++               
Sbjct: 1   MIKALYTSITGMNAAQNALSVTSNNIANAQTVGYKKQKAIFDDLLYNNTVGSRGDGAYAG 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF--ALESPRGIILTRDGRFK 107
            +     + V           GS   T  +++ A+EG+  F     +   +  TR G F 
Sbjct: 61  TNPKSIGNGVKFSGTSTDFSDGSITLTSDKMETAIEGNGLFLVGDRNAGNVEYTRKGSFG 120

Query: 108 VTDDGSLVSASGKYPVL-------DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           V+ D  + +  G+Y +               +             G  + K  +   +  
Sbjct: 121 VSKDNYVTTTGGQYVLGYGVKTGTQEIDFSSRPSPIHIPMGSAVGGIQTDKATIGGNLPR 180

Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDS 202
               +S  F   +  G S  +     +     TV    +E  
Sbjct: 181 NQNALSHEFTVFDAEGNSLTLRVNIKQKTESETVDGKVVEKP 222



 Score = 69.5 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 18/144 (12%), Positives = 40/144 (27%), Gaps = 9/144 (6%)

Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
                   G  +S +         +    I     +      G +    KV+  + + + 
Sbjct: 298 SGLTNYPTGKTLSTTEVTGRPAAIANDYSISDGGFVMMKYSDGSM----KVVGQLAVATF 353

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
             S G ++  N                        V+    E SN +   E   ++   +
Sbjct: 354 PNSGGLMKTGNGNYVATPSAGIPGIGVAGENGAGNVRGSAKESSNVDLSVEFVDLMLYQR 413

Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242
            F     +I  +++ + E +  I 
Sbjct: 414 GFQGNAKVIKVSDEVLNEVVNLIR 437


>gi|258592496|emb|CBE68805.1| putative Flagellar hook protein flgE [NC10 bacterium 'Dutch
           sediment']
          Length = 412

 Score = 92.2 bits (227), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 60/142 (42%), Gaps = 12/142 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
            ++F+  +    A +  L  + +N++N +T G++  + +FSE++                
Sbjct: 1   MSTFSTAITGLKAYQTDLGVIGNNIANANTTGYKASRAQFSELLVQTIEGATPPSDSTGG 60

Query: 54  ----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109
               Q  + V  G     +  G+   TG   D A++G+ ++ L +    I TR G F++ 
Sbjct: 61  IDPMQIGAGVIVGGILNIQTQGAIEPTGRSSDLAIQGEGFYVLSNGESQIYTRVGSFELD 120

Query: 110 DDGSLVSASGKYPVLDMASVPI 131
            +G+LV A     V  +     
Sbjct: 121 ANGNLVDAGTGLKVQGIDGDIH 142



 Score = 76.1 bits (185), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 21/163 (12%), Positives = 42/163 (25%), Gaps = 6/163 (3%)

Query: 86  GDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEK 145
           G   F           ++            + S           P  +       +    
Sbjct: 250 GGGIFTFNPGNAAASAQEFSIDFDALTGFAALSSVSMKQQDGVPPGSLTSFTVSNDGMVN 309

Query: 146 GEISQK-GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFL 199
           G  S      + T+ L S     G +R  N   +        +          T+  G L
Sbjct: 310 GIYSNGLVTEMDTLKLASFSNPAGLLRLANGQFAETPNSGVAQYGVAGTGGRGTIVAGAL 369

Query: 200 EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           E SN +   E+  +I   + + +   +I    +     +  + 
Sbjct: 370 EQSNVDLGTELVNLIIAQRGYEANAQVISVANQIQQTTLNLLR 412


>gi|241203124|ref|YP_002974220.1| flagellar hook protein FlgE [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240857014|gb|ACS54681.1| protein of unknown function DUF1078 domain protein [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 432

 Score = 92.2 bits (227), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 44/183 (24%), Positives = 73/183 (39%), Gaps = 10/183 (5%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           S    ++   A   RLSTVADN++N +T G++ +   FS +V       +     V +  
Sbjct: 6   SMKTAVSGMNAQANRLSTVADNIANVNTTGYKAVSTSFSSLVLPSSGG-NYNSGGVQTSV 64

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGKYP 122
                + G    T +  D A+ GD +F ++ P G  +LTR G F   D+G+LV+A+G   
Sbjct: 65  RQAVSDQGDISYTTSSTDLAISGDGFFIVQGPDGTPVLTRAGDFTKDDEGNLVNAAGFML 124

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
           +                  V   G        +   GL ++  + G  +      +   P
Sbjct: 125 MGYSY--------DSGSPAVVVNGFDGLVPVNVNQDGLTAIASTSGIFKGNLDSNAKIAP 176

Query: 183 PTP 185
             P
Sbjct: 177 VAP 179



 Score = 72.2 bits (175), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 15/87 (17%), Positives = 30/87 (34%), Gaps = 1/87 (1%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQ 212
            +        + +  G V   N      +   P  +    T+K G LE SN +   E+ +
Sbjct: 344 PLANVASPDKLTLMSGNVYSANGQSGVTVTGFPQTNG-LGTIKSGALEGSNVDLAGELTE 402

Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIR 239
           MI   + + + + +       M   + 
Sbjct: 403 MIESQRSYTANSKVFQTGSDIMDVLVN 429


>gi|188588515|ref|YP_001920211.1| flagellar hook protein FlgE [Clostridium botulinum E3 str. Alaska
           E43]
 gi|188498796|gb|ACD51932.1| flagellar hook protein FlgE [Clostridium botulinum E3 str. Alaska
           E43]
          Length = 364

 Score = 92.2 bits (227), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 60/161 (37%), Gaps = 37/161 (22%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50
           M  S   G++   A + +L  + +N++N  T GF++   +F++++    +          
Sbjct: 1   MLRSMYSGISGMKANQVKLDVIGNNIANVSTTGFKSSSARFTDMLYQNTSSATAPTSTKG 60

Query: 51  --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP------------- 95
             +  Q                G+ +STG  LD  ++GD +  + +              
Sbjct: 61  GTNAKQVGLGAQLASINKVMGQGNALSTGRSLDVCIDGDGYLIVGTGPTSYGGDDGTKGG 120

Query: 96  ------------RGIILTRDGRFKVTDDGSLVSASGKYPVL 124
                         I+ TRDG   +  +G+L++A G   + 
Sbjct: 121 TSIVNGSISGGDMDILYTRDGNLTLDHEGNLLTADGYRVMG 161



 Score = 76.1 bits (185), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 13/96 (13%), Positives = 30/96 (31%), Gaps = 12/96 (12%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTP------------LEDLSGVTVKRGFLEDS 202
           +  + + S    +G      + +  +    P                      +G LE S
Sbjct: 265 LGQVAMGSFKNPEGLTSVGGNLLEASSNSGPVIVKTSTGTTDGDNSKGFGDFIQGALEAS 324

Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           N +   +   MI  T+ F + + +I   ++ +    
Sbjct: 325 NVDLTEQFTDMITATRAFQASSKMISTADEILQTIT 360


>gi|127512279|ref|YP_001093476.1| flagellar hook protein FlgE [Shewanella loihica PV-4]
 gi|126637574|gb|ABO23217.1| flagellar basal body FlaE domain protein [Shewanella loihica PV-4]
          Length = 453

 Score = 92.2 bits (227), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 43/184 (23%), Positives = 75/184 (40%), Gaps = 5/184 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61
           SFNI L+   A ++ L+T A+N++N +T GF+  + +F++V  +    N        V +
Sbjct: 2   SFNIALSGIAAAQKDLNTTANNIANVNTTGFKESRAEFADVYASSIFANSKTTVGGGVTT 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESP---RGIILTRDGRFKVTDDGSLVSAS 118
            +     + GS   T   LD A+ G  +F   S    + +  TR G FKV  D  LV+++
Sbjct: 62  AQVAQQFQQGSLQFTSNALDMAINGGGFFVTSSEVGSQDLSYTRAGAFKVDADSYLVNSA 121

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178
           G Y                       K   +             ++++ G    + +  +
Sbjct: 122 GNYLQTFPVDKDGNSTSVSLTTTQPVKIPDTAGSPQKTDNIGIQMNLNAGEGTLDPANFN 181

Query: 179 PNIP 182
           PN P
Sbjct: 182 PNDP 185



 Score = 68.4 bits (165), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 34/91 (37%), Gaps = 5/91 (5%)

Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMY 208
            +A + L      QG  +  N+    ++   P         +  +++   LE SN +   
Sbjct: 361 PLARVALARFSNEQGLTQVGNTSWKESLDSGPALAGEANSGTFGSIRSSALEQSNVDLTT 420

Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           E+  +I   + F + +  ++ N       ++
Sbjct: 421 ELVDLISAQRNFQANSRTLEVNNTLQQTVLQ 451


>gi|325982371|ref|YP_004294773.1| fagellar hook-basal body protein [Nitrosomonas sp. AL212]
 gi|325531890|gb|ADZ26611.1| fagellar hook-basal body protein [Nitrosomonas sp. AL212]
          Length = 423

 Score = 92.2 bits (227), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 63/195 (32%), Gaps = 4/195 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID----QKISFV 59
            F  GL+   A    L  V +N++N +TVG++  + +F+++     +       Q     
Sbjct: 2   GFQQGLSGLSAASTNLDVVGNNIANVNTVGYKQSQAQFTDIFANSLDGAGSSRTQVGIGA 61

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119
                      G    T   LD A+ G  +F +     I  +R+G+F++  +G L  ASG
Sbjct: 62  RVATVAQLFNQGDIAPTNNPLDIAINGQGFFRMSDNGVISYSRNGQFRLDGNGFLTDASG 121

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                        I             +IS +      +G      +           + 
Sbjct: 122 INLTGYAPDANGNINTGQATNLKLNTTDISPRVTSTFNLGFNLPSNADAPAVTTFDANNT 181

Query: 180 NIPPTPLEDLSGVTV 194
                    +   ++
Sbjct: 182 QSFNEKKSGVFFDSL 196



 Score = 71.1 bits (172), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 15/130 (11%), Positives = 37/130 (28%), Gaps = 6/130 (4%)

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ-KGKVIATMGLYSVDMSQGFVRREN 174
           S  G            ++           +G  S  + K +  + L S    QG     +
Sbjct: 293 SQFGINLAQSDGYASGRLAGFTTSPEGIIQGNYSNGQNKTLGQVVLASFVNPQGLNPIGD 352

Query: 175 SGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
                             +     ++   +E +N +   E+ +MI   + + +    I+ 
Sbjct: 353 GRWIETPSSGQPLVGEPNSGTLGVLQASAVESANVDLTSELVKMITAQRMYQANAKTIET 412

Query: 230 NEKSMLEAIR 239
            +  +   + 
Sbjct: 413 QDAILQTLVN 422


>gi|264676570|ref|YP_003276476.1| FlgE [Comamonas testosteroni CNB-2]
 gi|262207082|gb|ACY31180.1| FlgE [Comamonas testosteroni CNB-2]
          Length = 422

 Score = 92.2 bits (227), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 38/193 (19%), Positives = 66/193 (34%), Gaps = 7/193 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN--DIDQKISFVAS 61
            F  GL+   A  + L  +  N++N++T GF+  +  F+E+V +             V  
Sbjct: 2   GFQQGLSGLNAASKNLDVIGHNIANSNTTGFKASRADFAEMVASAIGSASGQSSGIGVNV 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASGK 120
                    GS  STG  LD A+ G+ +F ++     I  TR G F +  +G+L +    
Sbjct: 62  ASVSQQFRQGSITSTGNNLDIAINGNGFFVVKQSDGSIAYTRAGNFGLDKEGNLKTVDND 121

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
             +  +        Q                G+ I       V++      R  +     
Sbjct: 122 NVMGYVVDPSTGKIQSGATPVPMSF----PTGQPIPAKQTSKVNVELNLDARATAAAGDA 177

Query: 181 IPPTPLEDLSGVT 193
               P+      T
Sbjct: 178 TATPPVAATPRAT 190



 Score = 78.0 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 13/89 (14%), Positives = 32/89 (35%), Gaps = 5/89 (5%)

Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEM 210
             + L +   +QG     N+         P      +  +  +++ G LE+SN +   E+
Sbjct: 332 GQIALAAFTNTQGLGSIGNNKWVATSDSGPALNGSAQTGTFGSLQSGALEESNVDLTAEL 391

Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             M+   + + +    I   ++     + 
Sbjct: 392 VNMMTAQRSYQANAQTIKTQDQVFSTLVN 420


>gi|194365680|ref|YP_002028290.1| flagellar hook protein FlgE [Stenotrophomonas maltophilia R551-3]
 gi|194348484|gb|ACF51607.1| flagellar basal body FlaE domain protein [Stenotrophomonas
           maltophilia R551-3]
          Length = 407

 Score = 92.2 bits (227), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 56/129 (43%), Gaps = 2/129 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVAS 61
            FN+ L+   A    LS  A+N++N +T GF+  + +F+++  A    +  +   S V  
Sbjct: 2   GFNVSLSGINAANSDLSVTANNVANVNTTGFKESRAEFADLFSATGYGLSKNAVGSGVRV 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
                  + G    TG  LD A+ G+ +F +      + +R G F+    G +++  G  
Sbjct: 62  SNVAQQFKQGHNEQTGRSLDMAISGEGFFTMNMNGTRVYSRAGNFQTDPSGYVINPQGAR 121

Query: 122 PVLDMASVP 130
             +   +  
Sbjct: 122 LQVFAPNAD 130



 Score = 77.2 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 14/92 (15%), Positives = 31/92 (33%), Gaps = 5/92 (5%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSM 207
           K +  + L + +  QG   + N+                   +   ++ G LE S  +  
Sbjct: 314 KPLGQVALTTFNNPQGLESKGNNLWVDTFSSGTPRTGMPDTSNLGKIQAGSLEASTVDLT 373

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            ++  MI   + F +   +I   ++     I 
Sbjct: 374 EQLVNMITAQRNFQANAQMITTQDQITQTVIN 405


>gi|196033292|ref|ZP_03100704.1| putative flagellar basal-body rod protein [Bacillus cereus W]
 gi|195993726|gb|EDX57682.1| putative flagellar basal-body rod protein [Bacillus cereus W]
          Length = 249

 Score = 92.2 bits (227), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 85/246 (34%), Gaps = 15/246 (6%)

Query: 11  AQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DIDQKISFVASG 62
             +   QR++  ++N++N  T GF+   +        +          +I      V   
Sbjct: 2   GMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIGSVDYAVVPA 61

Query: 63  KEYLSKEVGSFISTGTELDFALEGDA-----WFALESPRGIILTRDGRFKVTDDGSLVSA 117
             +++   G+   T +  DF L+        +F         LTRDG F +  D  L + 
Sbjct: 62  ATHVNLVQGNIQMTNSATDFFLDDGTAGTASFFVTSKNNETFLTRDGSFTLNSDRYLQTT 121

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV--DMSQGFVRRENS 175
           SG + + +                       +     IA +   +V  + +   ++REN 
Sbjct: 122 SGAFVMGENNERIRIPEGAKVAVQADGTLYDAVTQNNIARLQTKTVGAEANNRLMQRENK 181

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
             +     +        TVK   LE+SN +   EM  ++   +  ++   ++   +K   
Sbjct: 182 SFTLAEGNSADLPNGVGTVKNYMLENSNVDMTKEMADLMTDQKMISASQRVMTSFDKIYE 241

Query: 236 EAIRNI 241
           +    I
Sbjct: 242 KEANEI 247


>gi|262273529|ref|ZP_06051343.1| flagellar hook protein FlgE [Grimontia hollisae CIP 101886]
 gi|262222507|gb|EEY73818.1| flagellar hook protein FlgE [Grimontia hollisae CIP 101886]
          Length = 401

 Score = 92.2 bits (227), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 37/132 (28%), Positives = 65/132 (49%), Gaps = 2/132 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           S NIGL+   A   +++T++ N+SN  TVG+++ + +F +V        +     V++ +
Sbjct: 2   SINIGLSGLRATSDQINTISHNISNVGTVGYKSSRTEFQDVYAPQFGGGEFGGVEVSNVR 61

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPV 123
           +  S   G+  STG   D A+ G+ +F ++     + TR+G F +  DG LV+A G    
Sbjct: 62  Q--SFTSGAATSTGRNSDLAINGEGFFMVQQNGQRMYTRNGIFNLDSDGYLVTADGLRLQ 119

Query: 124 LDMASVPIQIPQ 135
               S    I  
Sbjct: 120 GYGVSETGSIQN 131



 Score = 68.7 bits (166), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 20/149 (13%), Positives = 47/149 (31%), Gaps = 10/149 (6%)

Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-----EISQKGKVIAT 157
               K+  D S  +  G    ++ +      P K   +     G       + K ++   
Sbjct: 253 SATMKIEMDVSEFTQFGSDFSINESKQDGYAPGKLAGWYFDADGSVYARYSNGKTQLQGQ 312

Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFL-----EDSNANSMYEMGQ 212
           + L      +G  +   +  + +            T + G L     E SN +   EM  
Sbjct: 313 LVLARFPNQEGLQQAGGTRWTESFSSGTALFGQPGTGQFGALRVGAYESSNVDLTEEMVS 372

Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           ++     + +    I  +++ +    +N+
Sbjct: 373 LMSAQSNYQANAKTIQASQEMVQILFQNM 401


>gi|315637837|ref|ZP_07893027.1| flagellar hook protein [Campylobacter upsaliensis JV21]
 gi|315482078|gb|EFU72692.1| flagellar hook protein [Campylobacter upsaliensis JV21]
          Length = 545

 Score = 92.2 bits (227), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 38/202 (18%), Positives = 71/202 (35%), Gaps = 11/202 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI----KNDIDQKI 56
           M  +F  G++        +   A+N++N +T GF+    +F ++  +       +  Q  
Sbjct: 1   MMGAFYNGISGVKTNSFGIDISANNIANVNTTGFKYSNAEFKDIFYSTITSQSTNPAQGG 60

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLV 115
               S    L  E GS +++  E D AL+G  +F +  +      TR+G FK   +G LV
Sbjct: 61  YGSTSASSKLVFEQGSPVASEGEFDVALQGKGFFGVLGADGMPYYTRNGAFKRDANGHLV 120

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
            + G + +  M      I   D +  +              T       ++        +
Sbjct: 121 DSYGNFVLGTMNPAFQGITYSDRVAGLMG------DYLNTGTPVNNGFTVNSNDKFTLGT 174

Query: 176 GISPNIPPTPLEDLSGVTVKRG 197
             S      P+       V + 
Sbjct: 175 TGSQGALQVPINMYLPPKVTQN 196



 Score = 76.4 bits (186), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 41/96 (42%), Gaps = 7/96 (7%)

Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPP-------TPLEDLSGVTVKRGFLEDSN 203
           +  ++  + LY+    QG +   ++  +               E ++    K GFLE SN
Sbjct: 447 QTAIVGKIALYNFINEQGLMAMGDNIFAATGNSGEASFIMKDGEIVNTAKFKGGFLEQSN 506

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +   E+  +I   + F++ +  I  +++ + +AI 
Sbjct: 507 VDLSMELSNLIVTQRAFDASSKSITTSDQMIQKAIN 542


>gi|315930325|gb|EFV09413.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           305]
          Length = 864

 Score = 92.2 bits (227), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 58/182 (31%), Gaps = 14/182 (7%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------K 49
             S   G++   A +  +    +N+SN +T GF+  +  F  +                 
Sbjct: 1   MRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATAPTDGRGG 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRFK 107
           ++  Q    V+          GS  +T    D A+ GD +F +         LTR G FK
Sbjct: 61  SNPLQIGLGVSVSSTTRIHSQGSVQTTDKNTDVAINGDGFFMVSDDGGLTNYLTRSGDFK 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           +   G+ V+ +G        +   Q                       +T      +++ 
Sbjct: 121 LDAYGNFVNNAGFVVQGWNINWDDQTIDSSRTPQNIFIDPGMHIPAAKSTEVAIKANLNS 180

Query: 168 GF 169
           G 
Sbjct: 181 GL 182



 Score = 73.0 bits (177), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 17/144 (11%), Positives = 46/144 (31%), Gaps = 5/144 (3%)

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           T      +    S  + +G+      +        + +          + K   +A + +
Sbjct: 718 TSGSNDGLVSSNSASTLTGQATDGYTSGNLKPDAIRVDDKGNILGEFTNGKTFAVAKIAM 777

Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIH 215
            SV  + G      +          +      T     +K   LE SN +    + ++I 
Sbjct: 778 ASVANNSGLEEIGGNLFKVTANSGNIVVGEAGTGGRGEMKTSALEMSNVDLSRSLTELII 837

Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239
           + + + + +  I  +++ +   I+
Sbjct: 838 IQRGYQANSKTISTSDQMLQTLIQ 861


>gi|104782843|ref|YP_609341.1| flagellar hook protein FlgE [Pseudomonas entomophila L48]
 gi|95111830|emb|CAK16554.1| flagellar hook protein FlgE [Pseudomonas entomophila L48]
          Length = 463

 Score = 91.9 bits (226), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 72/192 (37%), Gaps = 3/192 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---DIDQKISFVA 60
           SFNIGL+   A  ++L    +N++N +T GF++ + +F++V           +Q  + V 
Sbjct: 2   SFNIGLSGLYAANKQLDVTGNNIANVNTNGFKSSRAEFADVYAGANRLGVGKNQVGNGVR 61

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
                     G   +TG  LD  ++G  +F L     +  +R G F+   D  +V++ G 
Sbjct: 62  LANVSQQFGQGDVNNTGNVLDMGIQGQGFFVLSDNGSLSYSRAGAFQTNKDNFVVTSDGL 121

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
                 A    +I +        +   ++ K   +   G+     +     +     +  
Sbjct: 122 RLQGYAADANGKIQKGVLTDLKIDTSALAPKSTTLIDQGINLNSSALDIPLQVWDATATP 181

Query: 181 IPPTPLEDLSGV 192
               P +     
Sbjct: 182 PAMVPNKPFDPT 193



 Score = 69.1 bits (167), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 19/123 (15%), Positives = 39/123 (31%), Gaps = 5/123 (4%)

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
              D  +  I      +   V      +Q+ + I  + + S    QG  +   +    + 
Sbjct: 339 QSQDGYATGILSNLSIDSTGVMFASFSNQQSRAIGQVAIASFANPQGLQQIGGTRWKESF 398

Query: 182 PP-----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                     +  +  +V+   LE SN N   E+ ++I     + +    I      M  
Sbjct: 399 ASGIPGIDAPKTGTLGSVESNSLEASNVNLTQELVELIKAQSNYQANAKTISTESTIMQT 458

Query: 237 AIR 239
            I+
Sbjct: 459 IIQ 461


>gi|167623361|ref|YP_001673655.1| flagellar hook protein FlgE [Shewanella halifaxensis HAW-EB4]
 gi|167353383|gb|ABZ75996.1| flagellar basal body FlaE domain protein [Shewanella halifaxensis
           HAW-EB4]
          Length = 453

 Score = 91.9 bits (226), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 38/184 (20%), Positives = 72/184 (39%), Gaps = 5/184 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61
           SFNI L+   + ++ L+T A+N++N +T GF+  + +F++V  +    N        VA+
Sbjct: 2   SFNIALSGISSAQKDLNTTANNIANVNTTGFKESRAEFADVYASSIFANSKTTVGGGVAT 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESP---RGIILTRDGRFKVTDDGSLVSAS 118
            +       GS   T   LD A+ G  +F   S    +    TR G FK   +  +V ++
Sbjct: 62  SQVAQQFHQGSMAFTNNSLDMAINGGGFFVTSSEVGSQDHSYTRAGAFKFDSNNYIVDSA 121

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178
           G +                       +   +    V        ++++ G    + +   
Sbjct: 122 GNFLQTFPVDKDGNSTSVSLTTTKPVQIPDTAGSPVKTDSVGIQMNLNAGESTLDPAAFD 181

Query: 179 PNIP 182
           P+ P
Sbjct: 182 PDDP 185



 Score = 69.5 bits (168), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 15/91 (16%), Positives = 35/91 (38%), Gaps = 5/91 (5%)

Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMY 208
            +A + L S    QG  +  N+    ++   P         +  +++   LE SN +   
Sbjct: 361 PLARVALVSFANEQGLSQAGNTSWKASLDSGPALAGEANSGTFGSIRSSALEQSNVDLTT 420

Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           E+  +I   + F + +  ++ N       ++
Sbjct: 421 ELVDLISAQRNFQANSRTLEVNNTLQQTILQ 451


>gi|254457547|ref|ZP_05070975.1| flagellar hook protein FlgE [Campylobacterales bacterium GD 1]
 gi|207086339|gb|EDZ63623.1| flagellar hook protein FlgE [Campylobacterales bacterium GD 1]
          Length = 705

 Score = 91.9 bits (226), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 52/143 (36%), Gaps = 14/143 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G++   + +  +   ++N++N +T GF+  +  FS+++               
Sbjct: 1   MLKSLFSGVSGLQSHQVAMDVESNNIANVNTTGFKYSRANFSDLLAQTKAIATAPQGALG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGRF 106
             +  Q                GS  ++    D A++GD ++ +    G     TR G F
Sbjct: 61  GKNPVQVGLGSTISSMTRIFSQGSVQNSDKNTDVAIQGDGFYIVSPDGGNTYKYTRAGDF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASV 129
           K    G+ V  +G      +   
Sbjct: 121 KFDAGGNFVDNNGFVTQGWLRDP 143



 Score = 67.6 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 14/120 (11%), Positives = 39/120 (32%), Gaps = 5/120 (4%)

Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183
            D  +    +  + +          + +   +A +G+     ++G      +        
Sbjct: 582 QDGYTGGDLVGIRIDQSGTLVGSFSNGRSFGLAQIGMAKFTNNEGLSVEGGNIFIQTANS 641

Query: 184 TPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
                 +  T     ++   LE SN +    + Q+I + + F +    I  +++ +   I
Sbjct: 642 GDPIIGTAATAGRGFIQAAALEASNVDLSRALTQLIIIQRGFQANGKTITTSDQLLQTLI 701


>gi|327193059|gb|EGE59971.1| flagellar hook protein [Rhizobium etli CNPAF512]
          Length = 434

 Score = 91.9 bits (226), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 43/183 (23%), Positives = 74/183 (40%), Gaps = 10/183 (5%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           S    ++   A   RLSTV+DN++N +T G++ +   FS +V       +     V +  
Sbjct: 6   SMKTAVSGMNAQANRLSTVSDNIANVNTTGYKAVSTSFSSLVLPSSGG-NYNSGGVQTSV 64

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGKYP 122
                + G    T +  D A+ GD +F ++ P G  +LTR G F+  D+G+LV+A+G   
Sbjct: 65  RQAVSDQGDISYTTSTTDLAISGDGFFIVQGPDGTPVLTRAGDFQKDDEGNLVNAAGFQL 124

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
           +                  V   G        +   GL ++  + G  +      +   P
Sbjct: 125 MGYSY--------DSGSPAVVVNGFDGLVPVNVNQDGLTAIASTSGVFKGNLDSNANVAP 176

Query: 183 PTP 185
             P
Sbjct: 177 VAP 179



 Score = 73.4 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 17/121 (14%), Positives = 35/121 (28%), Gaps = 1/121 (0%)

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178
                  +  V I               +   +  +        + +  G V   N    
Sbjct: 312 NGQAATPVKDVTIDGDGIVYAKYEDGSTKPLYRIPLANVASPDKLTLMSGNVYSANGQSG 371

Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
             +   P  +    T+K G LE SN +   E+ +MI   + + + + +       M   +
Sbjct: 372 VTVTGFPQTNG-LGTIKSGALEGSNVDLAGELTEMIEAQRSYTANSKVFQTGSDIMDVLV 430

Query: 239 R 239
            
Sbjct: 431 N 431


>gi|228984838|ref|ZP_04145009.1| Flagellar hook protein FlgE [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229155324|ref|ZP_04283435.1| Flagellar hook protein FlgE [Bacillus cereus ATCC 4342]
 gi|228628249|gb|EEK84965.1| Flagellar hook protein FlgE [Bacillus cereus ATCC 4342]
 gi|228774890|gb|EEM23285.1| Flagellar hook protein FlgE [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 437

 Score = 91.9 bits (226), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 72/222 (32%), Gaps = 20/222 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49
           M  +    +    A +  LS  ++N++N  TVG++  K  F +++               
Sbjct: 1   MIKALYTSITGMNAAQNALSVTSNNIANAQTVGYKKQKAIFDDLLYNNTVGSRGDGAYAG 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF--ALESPRGIILTRDGRFK 107
            +     + V           GS   T  +++ A+EG+  F     +   +  TR G F 
Sbjct: 61  TNPKSIGNGVKFSGTSTDFSDGSITLTSDKMETAIEGNGLFLVGDRNGGNVEYTRKGSFG 120

Query: 108 VTDDGSLVSASGKYPVL-------DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           V+ D  + +  G+Y +               +             G  + K  +   +  
Sbjct: 121 VSKDSYVTNTGGQYVLGYGVKTGTQEIDFSSRPSPIHIPMGSAVGGIQTDKATIGGNLPR 180

Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDS 202
               +S  F   +  G S  +     +  +  TV    +E  
Sbjct: 181 NQNALSHEFTVFDAEGNSLTLRVNIKQKTTKETVDGKVVEKP 222



 Score = 69.9 bits (169), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 18/144 (12%), Positives = 40/144 (27%), Gaps = 9/144 (6%)

Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
                   G  +S +         +    I     +      G +    KV+  + + + 
Sbjct: 298 SGLTNYPTGKTLSTTEVTGRPAAIANDYSISDGGFVMMKYSDGSM----KVVGQLAIATF 353

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
             S G ++  N                        V+    E SN +   E   ++   +
Sbjct: 354 PNSGGLMKTGNGNYVATPSAGIPGIGVAGENGAGNVRGSAKESSNVDLSVEFVDLMLYQR 413

Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242
            F     +I  +++ + E +  I 
Sbjct: 414 GFQGNAKVIKVSDEVLNEVVNLIR 437


>gi|118477189|ref|YP_894340.1| flagellar hook protein FlgE [Bacillus thuringiensis str. Al Hakam]
 gi|225863612|ref|YP_002748990.1| putative flagellar hook protein FlgE [Bacillus cereus 03BB102]
 gi|229183945|ref|ZP_04311161.1| Flagellar hook protein FlgE [Bacillus cereus BGSC 6E1]
 gi|118416414|gb|ABK84833.1| flagellar hook protein [Bacillus thuringiensis str. Al Hakam]
 gi|225790448|gb|ACO30665.1| putative flagellar hook protein FlgE [Bacillus cereus 03BB102]
 gi|228599597|gb|EEK57201.1| Flagellar hook protein FlgE [Bacillus cereus BGSC 6E1]
          Length = 437

 Score = 91.9 bits (226), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 72/222 (32%), Gaps = 20/222 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49
           M  +    +    A +  LS  ++N++N  TVG++  K  F +++               
Sbjct: 1   MIKALYTSITGMNAAQNALSVTSNNIANAQTVGYKKQKAIFDDLLYNNTVGSRGDGAYAG 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF--ALESPRGIILTRDGRFK 107
            +     + V           GS   T  +++ A+EG+  F     +   +  TR G F 
Sbjct: 61  TNPKSIGNGVKFSGTSTDFSDGSITLTSDKMETAIEGNGLFLVGDRNGGNVEYTRKGSFG 120

Query: 108 VTDDGSLVSASGKYPVL-------DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           V+ D  + +  G+Y +               +             G  + K  +   +  
Sbjct: 121 VSKDSYVTNTGGQYVLGYGVKTGTQEIDFSSRPSPIHIPMGSAVGGIQTDKATIGGNLPR 180

Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDS 202
               +S  F   +  G S  +     +  +  TV    +E  
Sbjct: 181 NQNALSHEFTVFDAEGNSLTLRVNIKQKTTKETVDGKVVEKP 222



 Score = 69.9 bits (169), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 18/144 (12%), Positives = 40/144 (27%), Gaps = 9/144 (6%)

Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
                   G  +S +         +    I     +      G +    KV+  + + + 
Sbjct: 298 SGLTNYPTGKTLSTTEVTGRPAAIANDYSISDGGFVMMKYSDGSM----KVVGQLAVATF 353

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
             S G ++  N                        V+    E SN +   E   ++   +
Sbjct: 354 PNSGGLMKTGNGNYVATPSAGIPGIGVAGENGAGNVRGSAKESSNVDLSVEFVDLMLYQR 413

Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242
            F     +I  +++ + E +  I 
Sbjct: 414 GFQGNAKVIKVSDEVLNEVVNLIR 437


>gi|27464953|gb|AAN63050.1| flagellar component FlgF [Vibrio vulnificus]
          Length = 193

 Score = 91.9 bits (226), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 47/195 (24%), Positives = 74/195 (37%), Gaps = 11/195 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +  + ++      Q L   A+N++N  T GFR    +   +      +      F  
Sbjct: 1   MDRALFLAMSGAKQNMQALQLRANNLANVSTTGFRADLAQARSM--QAYGEGLPTRVFSM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESP-RGIILTRDGRFKVTDDGSLVSASG 119
           + +   +   GS I+TG +LD  +EG+ W  +        LTR+G  KV  +G L +ASG
Sbjct: 59  TERPGHNFAQGSVITTGRDLDITIEGNGWIGVMDKLGKEGLTRNGNLKVDQNGLLSNASG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172
            + VL     PI IP       +G  G IS   +      +  +D             + 
Sbjct: 119 -HLVLGEGGAPITIPLPVSKIEIGRDGTISVLPQGAPAEEMEEIDRIKLVKTNDSALFKD 177

Query: 173 ENSGISPNIPPTPLE 187
            N       P  P E
Sbjct: 178 TNGLFRHKEPNQPYE 192


>gi|77918787|ref|YP_356602.1| flagellar biosynthesis, hook protein [Pelobacter carbinolicus DSM
           2380]
 gi|77544870|gb|ABA88432.1| flagellar biosynthesis, hook protein [Pelobacter carbinolicus DSM
           2380]
          Length = 413

 Score = 91.9 bits (226), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 55/130 (42%), Gaps = 5/130 (3%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID---QKISFV 59
           ++   G++        +S + +N++NT+TVGF++ +  FS+++ +  N      Q     
Sbjct: 5   SALYSGISGMNTNGTAMSVIGNNIANTNTVGFKSSRTVFSDLLASSVNGSGGASQVGRGT 64

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI--ILTRDGRFKVTDDGSLVSA 117
                      G+F +T ++ D A+EG+  F +          TR G F    +G L +A
Sbjct: 65  GLSTVDNLFSQGTFETTESQTDLAIEGEGLFVVREEGAESLYYTRAGSFSFDGEGFLTNA 124

Query: 118 SGKYPVLDMA 127
            G        
Sbjct: 125 EGYRVQGKTY 134



 Score = 72.6 bits (176), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 22/134 (16%), Positives = 41/134 (30%), Gaps = 8/134 (5%)

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169
            + S V +  +          I I  +  +      GE   K +++            G 
Sbjct: 281 ANDSQVISQTQNGYGAGNLTNISIDNEGNVLAKYSNGEEIAKSRIVLAK----FSSFSGL 336

Query: 170 VRRENSGISPNIPPTPLEDLSGVT----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225
            +   S  S      P       T    +    LE S  +   E  +MI   + F + + 
Sbjct: 337 RKEGASLFSATGESGPPRIGVPGTELGNIFTNALEQSTVDLAAEFVKMITTQRGFQANSK 396

Query: 226 LIDENEKSMLEAIR 239
           +I   ++ + E I 
Sbjct: 397 VITTTDEMLSELIN 410


>gi|91791429|ref|YP_561080.1| protein of unknown function DUF1078-like protein [Shewanella
           denitrificans OS217]
 gi|91713431|gb|ABE53357.1| protein of unknown function DUF1078-like protein [Shewanella
           denitrificans OS217]
          Length = 392

 Score = 91.9 bits (226), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 53/125 (42%), Gaps = 4/125 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +F  GL+   +  + L  V++N++N +T G+R +         A+  D D+      
Sbjct: 1   MLQAFYTGLSGLNSYSKNLDNVSNNIANMNTAGYRGMD----SFYQALGGDSDKPGLGAQ 56

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
                    VG    TG + D A+ G  +FAL     +  TR G+F+   +  LV  +  
Sbjct: 57  ISGLGYRFSVGDIRQTGNDFDLAITGTGFFALLDGEKVFYTRTGQFEFDQNNVLVDKNTG 116

Query: 121 YPVLD 125
           + V  
Sbjct: 117 FKVAG 121



 Score = 56.8 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 6/53 (11%), Positives = 22/53 (41%)

Query: 188 DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
           +     +    +E SN +   E   M+ + + + + + +++   + + +   N
Sbjct: 336 EGRFKQLATSSIEMSNVDLSQEFADMLVIQRGYQASSRILNVANQMIEQLYEN 388


>gi|330830303|ref|YP_004393255.1| flagellar hook protein FlgE [Aeromonas veronii B565]
 gi|328805439|gb|AEB50638.1| Flagellar hook protein FlgE [Aeromonas veronii B565]
          Length = 450

 Score = 91.9 bits (226), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 67/169 (39%), Gaps = 5/169 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK--NDIDQKISFVAS 61
           SFN  L+   A ++ L+  A+N++N +T+GF+  + +F++V       N   Q  + VA+
Sbjct: 2   SFNNALSGVNAAQKDLNVTANNIANVNTMGFKESRAEFADVYANSIFVNAKTQVGNGVAT 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI---ILTRDGRFKVTDDGSLVSAS 118
           G        G+   T   LD A++G+ +F             TR G FK+ ++  +V+  
Sbjct: 62  GAVAQQFHQGALQFTNNALDLAIQGNGFFVTSDGLTNLDRTYTRAGAFKLNENSYMVNNQ 121

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           G Y      +                +        +  +    S ++  
Sbjct: 122 GHYLQGYEINTDGTPKAVSINATKPIQIPDRAGEPIKTSKIEASFNLPS 170



 Score = 68.4 bits (165), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 17/123 (13%), Positives = 41/123 (33%), Gaps = 5/123 (4%)

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN- 180
              D ++V      +     +      +     +A + +     SQG  +  ++    + 
Sbjct: 326 LTQDGSTVGRLTKVEITPDGIVSATYSNATTIKVAMVAMAKFANSQGLTQVGDTSWRQSL 385

Query: 181 ----IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                 P      +  T+K   LE SN +   E+  +I   + F + +  ++ N      
Sbjct: 386 LSGDALPGTPNSGTFGTIKSSALEQSNVDLTSELVDLITAQRNFQANSRSLEVNSSLQQT 445

Query: 237 AIR 239
            ++
Sbjct: 446 ILQ 448


>gi|254516989|ref|ZP_05129047.1| flagellar hook protein FlgE [gamma proteobacterium NOR5-3]
 gi|219674494|gb|EED30862.1| flagellar hook protein FlgE [gamma proteobacterium NOR5-3]
          Length = 429

 Score = 91.9 bits (226), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 54/135 (40%), Gaps = 2/135 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61
           +F+  ++   A    L  +++N++N+ T GF+  + +F++V          +     V+ 
Sbjct: 2   AFSTAISGINAATADLGVISNNIANSSTTGFKASRAEFADVYATSLLGAGSNAIGKGVSL 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
                    G+   T   LD A+ G+ +F L     I  TR G F+V  +G LVS     
Sbjct: 62  AGVTQEFGQGNITFTNNSLDLAINGNGFFQLSVEGAIEYTRAGNFQVDREGFLVSNQNSR 121

Query: 122 PVLDMASVPIQIPQK 136
                      +  +
Sbjct: 122 LQGFQVDAGGDVTGQ 136



 Score = 71.8 bits (174), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 15/98 (15%), Positives = 30/98 (30%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLED 201
             + + + +  + L S +   G     ++                 T     V+   LED
Sbjct: 330 YTNGESRALGQIALASFNNQNGLQPVGDTNWVETFSSGSPNVGEPGTSGLGVVQSAALED 389

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN     E+  +I   + F +   +I   +      I 
Sbjct: 390 SNVEITQELVDLIVAQRNFQANAQVIQAEDAITQTVIN 427


>gi|332799182|ref|YP_004460681.1| flagellar hook-basal body protein [Tepidanaerobacter sp. Re1]
 gi|332696917|gb|AEE91374.1| flagellar hook-basal body protein [Tepidanaerobacter sp. Re1]
          Length = 411

 Score = 91.9 bits (226), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 64/189 (33%), Gaps = 12/189 (6%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
             S   G+      + ++  + +N++N +TVGF+  +V F + +                
Sbjct: 1   MRSMFSGVTGLRNHQVKMDVIGNNIANVNTVGFKKSRVTFQDTLSQTMRGAASPQGNRGG 60

Query: 54  ----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109
               Q    +            S   TG   D ++EGD +F +     +  TR G F   
Sbjct: 61  TNPMQVGLGMTIASIDTIHSPSSAEYTGNMTDLSIEGDGYFIVGDGLDMFYTRAGNFGFD 120

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169
           ++G+L++ +    V+            D+        EI +   + A+            
Sbjct: 121 ENGNLINTANGLKVMGWQDTEKHEVPADKSPQSIRSIEIRKGMMIPASATTEINFAKNLN 180

Query: 170 VRRENSGIS 178
              EN+G  
Sbjct: 181 AETENNGTY 189



 Score = 82.6 bits (202), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 18/122 (14%), Positives = 42/122 (34%), Gaps = 5/122 (4%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             +            +   V      +   + +A + L + D   G ++   +    +  
Sbjct: 287 YQNGYPAGTLTDVTTDTTGVITGIFDNGYNRQLAQVALANFDNPAGLIKAGQNMYRYSNN 346

Query: 183 PTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
               +     T     +  G+LE SN +   E  QMI   + F + + +I  +++ + E 
Sbjct: 347 SGEPQIGESGTGGRGAIAPGYLEMSNVDLSEEFTQMIITQRGFQANSRIITTSDEMLQEL 406

Query: 238 IR 239
           + 
Sbjct: 407 VN 408


>gi|221069322|ref|ZP_03545427.1| flagellar basal body FlaE domain protein [Comamonas testosteroni
           KF-1]
 gi|220714345|gb|EED69713.1| flagellar basal body FlaE domain protein [Comamonas testosteroni
           KF-1]
          Length = 422

 Score = 91.5 bits (225), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 37/193 (19%), Positives = 65/193 (33%), Gaps = 7/193 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN--DIDQKISFVAS 61
            F  GL+   A  + L  +  N++N+ T GF+  +  F+E++ +             V  
Sbjct: 2   GFQQGLSGLNAASKNLDVIGHNIANSSTTGFKASRADFAEMIASAIGSASGQSSGIGVNV 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASGK 120
                    GS  STG  LD A+ G+ +F ++     I  TR G F +  +G+L +    
Sbjct: 62  AAVSQQFRQGSITSTGNNLDLAINGNGFFVVKQSDGSIAYTRAGNFGLDKEGNLKTVDND 121

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
             +  +        Q                G+ I      +V++      R        
Sbjct: 122 NVMGYVVDPTTGKIQSGATPVPMSF----PTGQPIPAKQTSTVNVELNLDARATDAAGDA 177

Query: 181 IPPTPLEDLSGVT 193
               P+      T
Sbjct: 178 TATPPVAATPRAT 190



 Score = 79.5 bits (194), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 61/187 (32%), Gaps = 9/187 (4%)

Query: 58  FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSA 117
           F ASGK            +GT LD ++ G        P   +    G          VS+
Sbjct: 238 FDASGKLTSVTPNAPTTGSGTTLDLSISGGTANPNGLPAFDVAFDFGGLTQFGTKFAVSS 297

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177
             +      A   I + +   I      G    +G++     L +   +QG     N+  
Sbjct: 298 LKQDGYTSGALTGINVGRDGSIVASYSNGVTRTEGQI----ALAAFTNTQGLGSIGNNKW 353

Query: 178 SPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
                  P      +  +  +++ G LE+SN +   E+  M+   + + +    I   ++
Sbjct: 354 VATSDSGPALNGSAQTGTFGSLQSGALEESNVDLTAELVNMMTAQRSYQANAQTIKTQDQ 413

Query: 233 SMLEAIR 239
                + 
Sbjct: 414 VFSTLVN 420


>gi|310659037|ref|YP_003936758.1| flagellar hook protein [Clostridium sticklandii DSM 519]
 gi|308825815|emb|CBH21853.1| flagellar hook protein [Clostridium sticklandii]
          Length = 418

 Score = 91.5 bits (225), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 60/151 (39%), Gaps = 15/151 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-------- 52
           M  S N  ++A    + R+  + +N++N +T+G+++ +V F + +  +            
Sbjct: 1   MMRSMNSAVSALRNHQLRMDVIGNNIANVNTIGYKSSRVTFKDSLSQMLRGASGPDASRG 60

Query: 53  ----DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE---SPRGIILTRDGR 105
                Q    +           G    T   LD  + G+ +F +    +  G+  TR G 
Sbjct: 61  GTNPQQVGLGMDLSSIDTLFTTGVPDRTDRGLDVMVNGEGFFMVSADGTDNGMYYTRAGN 120

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQK 136
           F + +DG+LV+A G   +         +  +
Sbjct: 121 FDIDEDGNLVNADGLRVLGYKTDDAGNVGNE 151



 Score = 84.1 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 14/94 (14%), Positives = 33/94 (35%), Gaps = 5/94 (5%)

Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNAN 205
           + K++  +         G V+   +    +      +           ++ G LE SN +
Sbjct: 322 RTKILGQVATSIFANPAGLVKMGGNLYRSSANSGDPQVNKPGTGGNGGLQPGALEMSNVD 381

Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              E   MI   + F + + +I   ++ + E + 
Sbjct: 382 LGKEFTNMIVTQRGFQANSRIISTTDQMLEELVN 415


>gi|91204389|emb|CAJ70889.1| similar to flagellar hook protein [Candidatus Kuenenia
           stuttgartiensis]
          Length = 532

 Score = 91.5 bits (225), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 34/135 (25%), Positives = 60/135 (44%), Gaps = 4/135 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID----QKISFV 59
           +   G+    + +  L  + +N+SN +T G+++ ++ FS+++   K        Q    V
Sbjct: 6   ALYAGVTGIRSHQSWLDVIGNNLSNINTYGYKSSRLLFSDLISQDKGSGGVNPMQIGMGV 65

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119
             G        G+  +T  E DFA++GD +F L        +R G F       LV ++ 
Sbjct: 66  KVGSISSLFSQGTLEATNNEFDFAIQGDGFFVLNGGNKNFFSRVGTFATDASNQLVDSTT 125

Query: 120 KYPVLDMASVPIQIP 134
            Y +LD +   I IP
Sbjct: 126 GYQILDSSGKTITIP 140



 Score = 78.8 bits (192), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 67/200 (33%), Gaps = 9/200 (4%)

Query: 45  VGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDG 104
           + A     D  I+         + +     S  T L F  +G         +     +  
Sbjct: 334 MRASMPSADGTITTDTISAITFNDDGSLKSSGDTTLTFKFDGITTSQTVKFKLGTFGKTD 393

Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
               +  GS V+AS +      +     +     ++ +   G  S+    IA + L +  
Sbjct: 394 GIYQSGKGSSVTASEQDGSESGSFSSFSVDTDGTMYALYSNGTSSK----IAQLQLATFG 449

Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQK 219
             QG  R  ++              +G T     +  G+LE SN +   E+  +I   + 
Sbjct: 450 NVQGLRRSGDNLYEQTDSSGEPLYTTGGTGSAGDIYNGYLEASNVDMTSELTSLIMAQRG 509

Query: 220 FNSITTLIDENEKSMLEAIR 239
           F   + +I   ++ + EA+ 
Sbjct: 510 FQLNSRVISTADEVLAEAVN 529


>gi|283955452|ref|ZP_06372950.1| flagellar hook protein flgE [Campylobacter jejuni subsp. jejuni
           414]
 gi|283793079|gb|EFC31850.1| flagellar hook protein flgE [Campylobacter jejuni subsp. jejuni
           414]
          Length = 544

 Score = 91.5 bits (225), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 44/216 (20%), Positives = 80/216 (37%), Gaps = 9/216 (4%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI----KNDIDQKIS 57
             SF  G++        +   A+N++N +T GF+    +F ++  +       +  Q   
Sbjct: 1   MNSFYNGVSGVKTNSFGIDIYANNIANVNTTGFKYSDAQFKDIFYSTVTTQSTNPAQGGY 60

Query: 58  FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLVS 116
              S    +  E GSF+++ +E D AL+G  +F +         TR+G FK   +G LV 
Sbjct: 61  GSGSASSNVVFEQGSFVASDSEFDVALQGKGFFGVLGADNNAYYTRNGTFKRDANGYLVD 120

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           + G + +  M      I   D +  +      +            +   S G    + + 
Sbjct: 121 SYGNFVLGTMNPAFTGINYSDRVAGLMGDYLNTGTPVNNGFTVNSNDSFSIGTTASQQAI 180

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQ 212
             P     P +    V    G L   N N+  E+ +
Sbjct: 181 KVPVNMYLPPQVTQNVK-WSGSL---NTNTTTEVVK 212



 Score = 71.4 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 7/124 (5%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             D  +                    + K  ++  + LY+    QG     ++  +    
Sbjct: 418 QQDGVAEGFFKQYNISDDGSIIAQFSNGKNAIVGKLALYNFINEQGLAAMGDNIFAATAN 477

Query: 183 P-------TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
                      + ++    K GFLE SN +   E+  +I   + F++ +  I  +++ + 
Sbjct: 478 SGNASFIMKNGQIVNTAKFKGGFLEQSNVDLSVELSNLIVTQKAFDASSKSITTSDQMIQ 537

Query: 236 EAIR 239
           +AI 
Sbjct: 538 KAIN 541


>gi|148554189|ref|YP_001261771.1| flagellar basal body FlaE domain-containing protein [Sphingomonas
           wittichii RW1]
 gi|148499379|gb|ABQ67633.1| flagellar basal body FlaE domain protein [Sphingomonas wittichii
           RW1]
          Length = 435

 Score = 91.5 bits (225), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 61/197 (30%), Gaps = 4/197 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK-ISFVASG 62
           SF   L+   A +  L+ +++N++N  T GF+    +F ++V +                
Sbjct: 2   SFYTALSGLKASQTDLAVISNNIANVGTTGFKRSGTEFGDLVSSSPMQSSGIAGQGTRLR 61

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFAL---ESPRGIILTRDGRFKVTDDGSLVSASG 119
                   G   S+   LD A+ G  +F      S   +  TR+G F V  +  LV +SG
Sbjct: 62  GIAQQFTQGGLESSERSLDLAISGQGFFVTRASNSNGQVSYTRNGAFSVDANRFLVDSSG 121

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
            Y           +           +  ++            SV             I  
Sbjct: 122 AYLQALPTDTKGNVTATGLSSARSIQLPLTSGTSKATQTIDLSVTFPSAGDVPSTRAIYS 181

Query: 180 NIPPTPLEDLSGVTVKR 196
              P   +     +  +
Sbjct: 182 TTNPYKFDRTDPNSYNQ 198



 Score = 75.3 bits (183), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 19/150 (12%), Positives = 44/150 (29%), Gaps = 9/150 (6%)

Query: 95  PRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV 154
           P    L   G  K++     +++  +          + +     I      G+    GK+
Sbjct: 287 PLEFTLNYSGSTKMSASPFTLTSFDQDGYAAGQLDNVSVGADGLIVATFSNGDSQALGKI 346

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS-----GVTVKRGFLEDSNANSMYE 209
           I      +    +G  +  +S                       ++ G LE +N +   E
Sbjct: 347 ILA----NFSNPEGLRQLGDSKWGATGLSGEPIIGEASSNGTGQIQSGALEQANVDITEE 402

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +  +I   + F++    I+         + 
Sbjct: 403 LVALIQAQRNFSANAKTIEAANTMTQTIVN 432


>gi|311694361|gb|ADP97234.1| flagellar hook protein FlgE [marine bacterium HP15]
          Length = 632

 Score = 91.5 bits (225), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 38/184 (20%), Positives = 69/184 (37%), Gaps = 10/184 (5%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA--IKNDIDQKISFVAS 61
           +FN GL+   A    L    +N++N  TVGF+  K +F ++  +  +    +     V  
Sbjct: 2   AFNTGLSGLRAASVDLDVTGNNIANASTVGFKGSKAQFGDLYASGFLSAGTNPIGDGVRV 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
                S   G+   T   LD A+ GD +F L +   I  +R G+F +  +G + +     
Sbjct: 62  QDVKQSFGQGNISFTDNGLDMAIAGDGFFILNNGGEIRYSRAGQFGIDKEGYVTNNQNMR 121

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
                A     +         G +G++      +A     ++D       RE+   +   
Sbjct: 122 VQGYTADEDGNL--------SGIRGDLQIATDNLAPRRTTNLDSDLNLDSRESVLETRVR 173

Query: 182 PPTP 185
              P
Sbjct: 174 DVGP 177



 Score = 73.0 bits (177), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 11/98 (11%), Positives = 35/98 (35%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLED 201
             + + + +  + L S + + G     ++                +  +  ++K   +E+
Sbjct: 533 YTNGQSQALGQVALASFNNTNGLSPVGDTSWVETFESGQPIIGAPDTGTLGSIKASSVEE 592

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E+  +I   + + +    I+ ++      I 
Sbjct: 593 SNVDLSAELVNLIIAQRNYQANAKTIETSDAVTQTIIN 630


>gi|154250212|ref|YP_001411037.1| hypothetical protein Fnod_1537 [Fervidobacterium nodosum Rt17-B1]
 gi|154154148|gb|ABS61380.1| protein of unknown function DUF1078 domain protein
           [Fervidobacterium nodosum Rt17-B1]
          Length = 770

 Score = 91.5 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 71/187 (37%), Gaps = 13/187 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G++     +Q +  V++N+SN +T+GF+  +V ++     I            
Sbjct: 1   MMRSLYSGVSGLQGFQQEIDVVSNNISNVNTIGFKGARVTYATNFSQILDMSRRATDNTG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
             +  Q    +           GSF +TG + D A++G+ +F L + +    TR G F +
Sbjct: 61  GTNPKQIGYGIRVASIDKIMNQGSFQNTGKKTDLAIQGEGFFILSNGQRQFFTRAGNFDL 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEIS-QKGKVIATMGLYSVDMSQ 167
             +G++V  +    +    +    +  +  +        I    G  +A      + M+ 
Sbjct: 121 DLNGTIVQPTTGLKLQGWVAEVDPMSGRRYVDTNKPISNIQISSGLSMAAKQTTRMTMAG 180

Query: 168 GFVRREN 174
               R  
Sbjct: 181 NLDARVG 187



 Score = 83.0 bits (203), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 32/92 (34%), Gaps = 5/92 (5%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLEDSNANSM 207
            V+  + L + +   G +   NS    +                 ++  G LE SN +  
Sbjct: 676 DVLGKVALATFNNPAGLLELGNSLYGESANSGTARIGQPSKGGFGSLVAGALEMSNVDLS 735

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            E  ++I   + F +    I   ++ + E + 
Sbjct: 736 EEFTKLIIAQRGFQANARTITTADQILQEVVN 767


>gi|224370779|ref|YP_002604943.1| FlgE [Desulfobacterium autotrophicum HRM2]
 gi|223693496|gb|ACN16779.1| FlgE [Desulfobacterium autotrophicum HRM2]
          Length = 901

 Score = 91.5 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 54/129 (41%), Gaps = 5/129 (3%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA---IKNDIDQKISFV 59
           +S   G +    +   +  V +N+SN +TVGF+  +  F++ +      ++  DQ    +
Sbjct: 5   SSLFTGTSGLTNMGNAMQVVGNNISNVNTVGFKKGRSTFADTLSQSVATQSGTDQVGRGM 64

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI--ILTRDGRFKVTDDGSLVSA 117
           + G    S + GSF STG   D ++ GD +F +          TR G F     G LV+ 
Sbjct: 65  SIGAVDQSFDTGSFESTGNSTDLSIGGDGFFVVRQSNSENNFYTRAGNFHFDKSGQLVNP 124

Query: 118 SGKYPVLDM 126
                    
Sbjct: 125 ESYLVQGWA 133



 Score = 82.6 bits (202), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 46/162 (28%), Gaps = 7/162 (4%)

Query: 85  EGDAWFALESPRGIIL--TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNV 142
            G   F++E   G            ++      S++  Y   D  S             +
Sbjct: 738 FGSTEFSIELDIGTRYDGINFINDSLSSTQYARSSNTVYQDADGYSAGDLQGVDVASDGI 797

Query: 143 GEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRG 197
                 + +   +  +GL     + G      +  S              +    T+   
Sbjct: 798 MTGVYSNGQLIPLFRVGLAKFLNNNGLSNSGGNLFSETRDSGSAITNKPGENGLGTISPN 857

Query: 198 FLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            LE SN +   E  +MI   + F + +  I   ++ M   I 
Sbjct: 858 SLEMSNVDISEEFVKMITTQRGFQANSKTITTVDEMMQTVIN 899


>gi|192358786|ref|YP_001982400.1| flagellar hook protein FlgE [Cellvibrio japonicus Ueda107]
 gi|190684951|gb|ACE82629.1| flagellar hook protein FlgE [Cellvibrio japonicus Ueda107]
          Length = 803

 Score = 91.5 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/207 (18%), Positives = 76/207 (36%), Gaps = 7/207 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61
           SFN  L+   A    L    +N++N  T+GF++ + +F +V  +       +   S V  
Sbjct: 2   SFNTALSGIRAANTDLQVTGNNIANASTIGFKSSRAEFGDVYTSTLLGGGANTPGSGVTI 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
                    G+   T  ELD ++ G+ +F +E     + TR G F +  +G +V+ +G  
Sbjct: 62  QNIRQQFTQGNLKFTQNELDLSINGEGFFVVEKNGERLFTRAGTFGLDKNGYIVNGTGAL 121

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
               +A     I     + ++          +  A    ++++ ++  +       S N 
Sbjct: 122 LQGFVADANGNISG--VLSDLRVDVSSQAPRQTTAVDASFNLNANESVLETTGQRFSSNG 179

Query: 182 PPTPLEDLSGVTVKRGFLEDSNANSMY 208
                      T     L   N  ++ 
Sbjct: 180 SGVNEAQQGAKTATTSTL---NVGAVS 203



 Score = 68.0 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 8/94 (8%), Positives = 31/94 (32%), Gaps = 5/94 (5%)

Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNAN 205
           + +++  + L +           ++  +           +  +     +  G +E+SN +
Sbjct: 708 EAQILGQVALANFASVDNLKPTGDTMWTQTFESGEAVIGAPGSAQLGNITAGAVEESNVD 767

Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              ++  +I   + + +    I+    +    I 
Sbjct: 768 LSEQLVNLIIAQRNYQANAKTIETANATTQTIIN 801


>gi|88704306|ref|ZP_01102020.1| Flagellar hook protein FlgE [Congregibacter litoralis KT71]
 gi|88701357|gb|EAQ98462.1| Flagellar hook protein FlgE [Congregibacter litoralis KT71]
          Length = 429

 Score = 91.5 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 64/195 (32%), Gaps = 5/195 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61
           +F+  ++   A    L  V++N++N  T GF+  + +F++V          +     V+ 
Sbjct: 2   AFSTAISGINAATADLGVVSNNIANASTTGFKASRAEFADVYATSLLGAGSNAIGKGVSL 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
                    G+   T   LD A+ G+ +F L     +  TR G F+V  +G LVS     
Sbjct: 62  AGVTQEFGQGNITFTNNSLDLAINGNGFFQLSVEGAVEYTRAGNFQVDREGFLVSNQNAR 121

Query: 122 PVL---DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178
                 D            +I         +    + + +    V    GF         
Sbjct: 122 LQGFQVDGGGDVTGQLGDIQIDTSLIDPNPTSNVSLTSNLDSREVTTGTGFATNGPYDAF 181

Query: 179 PNIPPTPLEDLSGVT 193
              P  P       T
Sbjct: 182 AVPPTAPSPADFNAT 196



 Score = 71.8 bits (174), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 15/98 (15%), Positives = 30/98 (30%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLED 201
             + + + +  + L S +   G     ++                 T     V+   LED
Sbjct: 330 YTNGESRALGQIALASFNNQNGLQPVGDTNWVETFSSGSPNVGEPGTSGLGAVQSAALED 389

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN     E+  +I   + F +   +I   +      I 
Sbjct: 390 SNVEITQELVDLIVAQRNFQANAQVIQAEDAITQTVIN 427


>gi|220905353|ref|YP_002480665.1| hypothetical protein Ddes_2091 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219869652|gb|ACL49987.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           desulfuricans subsp. desulfuricans str. ATCC 27774]
          Length = 499

 Score = 91.1 bits (224), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 61/181 (33%), Gaps = 14/181 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--------- 51
           M +S  IG      L + ++   +N++N  T+G++   + FS++  A +           
Sbjct: 1   MNSSLYIGATGMKGLAEGMNVTTNNLANVSTIGYKQQGILFSDIFYAEQGGMGNWWNAQD 60

Query: 52  -----IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106
                + Q    +           G+  S+ T  D A+ G  +F +     +  TR G F
Sbjct: 61  NSRVALGQVGMGLQVESVRTLFGQGALESSNTVTDMAISGKGFFQVTDGVDLYYTRAGDF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           +   +G L + SG        +         +I         S+    +       ++  
Sbjct: 121 RPDREGVLRTPSGLALNGYKYNADGSKGGLQQITIDKFATMPSKSTTSVDMRFNLGLETP 180

Query: 167 Q 167
            
Sbjct: 181 N 181



 Score = 74.5 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 14/97 (14%), Positives = 37/97 (38%), Gaps = 5/97 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS-----GVTVKRGFLED 201
             + +   +  + +       G  R  ++  S       ++          T++   +E+
Sbjct: 399 FSNNQSMDLWQIPVCRFTSEDGLRREGHNMFSATADAGQMDMGEAGTENYGTIRAYNIEN 458

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           SN +   EM  MI   + F S + ++   ++ + +A+
Sbjct: 459 SNVDVATEMANMIITQRGFQSNSKVVTTADQMLQKAV 495


>gi|228945356|ref|ZP_04107711.1| Flagellar hook protein FlgE [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228814328|gb|EEM60594.1| Flagellar hook protein FlgE [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
          Length = 437

 Score = 91.1 bits (224), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 61/181 (33%), Gaps = 13/181 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49
           M  +    +    A +  LS  ++N++N  TVG++  K  F +++               
Sbjct: 1   MIKALYTSITGMNAAQNALSVTSNNIANAQTVGYKKQKAIFDDLLYNNTVGSRGDGAYAG 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF--ALESPRGIILTRDGRFK 107
            +     + V           GS   T  +++ A+EG+  F     +   +  TR G F 
Sbjct: 61  TNPKSIGNGVKFSGTSTDFSDGSITLTSDKMETAIEGNGLFLVGDRNGGNVEYTRKGSFG 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           V+ D  + +  G+Y +        Q        +       S  G +         ++ +
Sbjct: 121 VSKDNYVTTTGGQYVLGYGVKNGTQEIDFSSRPSPIHIPMGSAVGGIQTDKATIGGNLPR 180

Query: 168 G 168
            
Sbjct: 181 N 181



 Score = 68.7 bits (166), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 18/144 (12%), Positives = 40/144 (27%), Gaps = 9/144 (6%)

Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
                   G  +S +         +    I     +      G +    KV+  + + + 
Sbjct: 298 SGLTNYPTGKTISTTEVTGRPAAIANDYSISDGGFVMMKYSDGSM----KVVGQLAVATF 353

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
             S G ++  N                        V+    E SN +   E   ++   +
Sbjct: 354 PNSGGLMKTGNGNYVATPSAGIPGIGVAGENGAGNVRGSAKESSNVDLSVEFVDLMLYQR 413

Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242
            F     +I  +++ + E +  I 
Sbjct: 414 GFQGNAKVIKVSDEVLNEVVNLIR 437


>gi|254462557|ref|ZP_05075973.1| flagellar hook protein FlgE [Rhodobacterales bacterium HTCC2083]
 gi|206679146|gb|EDZ43633.1| flagellar hook protein FlgE [Rhodobacteraceae bacterium HTCC2083]
          Length = 1399

 Score = 91.1 bits (224), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 70/170 (41%), Gaps = 5/170 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG--AIKNDIDQKISFVAS 61
           SF   L      +  +ST ++N++N  T GF+  + +F ++     ++N      S    
Sbjct: 2   SFYTALTGLNDAQSDISTSSNNIANVGTTGFKRSRAEFGDIFATSPLQNSSSSIGSGAIL 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWF---ALESPRGIILTRDGRFKVTDDGSLVSAS 118
                    G+  S+   LD A+ G  +F     ++   ++ TR+G F V ++ ++V +S
Sbjct: 62  KGVKQQFTQGNIASSLNALDMAISGQGFFALKPSQTSTQVVYTRNGSFNVDNNRNVVDSS 121

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
           G++ +    +    +  KD       +  ++       T    SV++   
Sbjct: 122 GQFLLTYPVNEDGSVTAKDIDSATPLRLPVTSGDPQATTNVDLSVNLPAN 171



 Score = 80.3 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 19/142 (13%), Positives = 41/142 (28%), Gaps = 9/142 (6%)

Query: 103  DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162
                        V+   +          + I     +      G+    GK++    L +
Sbjct: 1259 FSSSTQLATPFAVNNLEQNGFTSGRLDGLNIDATGLLRANYTNGQNKPLGKIV----LAN 1314

Query: 163  VDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLT 217
             +   G  +  N+                 T     ++ G LE SN +   E+  +I   
Sbjct: 1315 FNNQNGLKQVGNATFVETATSGEPLIGEAGTEGFGSIQSGALERSNVDITEELVNLITAQ 1374

Query: 218  QKFNSITTLIDENEKSMLEAIR 239
            + F + +  I+ + +     I 
Sbjct: 1375 RNFQASSKAIETSTQLTQTIIN 1396


>gi|121607561|ref|YP_995368.1| flagellar basal body FlaE domain-containing protein
           [Verminephrobacter eiseniae EF01-2]
 gi|121552201|gb|ABM56350.1| flagellar basal body FlaE domain protein [Verminephrobacter
           eiseniae EF01-2]
          Length = 426

 Score = 91.1 bits (224), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/193 (20%), Positives = 67/193 (34%), Gaps = 8/193 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID--QKISFVAS 61
            F  GL+   A  + L  +  N++N +TVGF++ + +F+E+V +     D       V  
Sbjct: 2   GFQQGLSGLNAASKSLDVIGHNVANANTVGFKSGRAEFAEMVASAIGSADGLNAGIGVDV 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGK 120
                    GS   TG  LD A+ G  +F L  P G    TR G FK+  DG++++    
Sbjct: 62  AAVSQQFGQGSLTITGNNLDVAINGAGFFTLTLPDGTPAYTRSGNFKLDKDGNMITNDAA 121

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
             +         +            G +      I      ++  +     R        
Sbjct: 122 RVMGYPVDPATGLRTG-----AEPVGMVFPTSAPIPAKQTGTITAAFNLDARAPDAAGNP 176

Query: 181 IPPTPLEDLSGVT 193
               P+      T
Sbjct: 177 AAQPPVPATPRTT 189



 Score = 77.6 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 14/89 (15%), Positives = 32/89 (35%), Gaps = 5/89 (5%)

Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEM 210
             + L  +  +QG     ++         P       D +   ++ G LEDSN +   E+
Sbjct: 336 GQLALSRIRNAQGLAAVGSNNWVATHASGPAVVGTASDGNFGALRSGALEDSNVDLTAEL 395

Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             M+   + + +    +   ++ M   + 
Sbjct: 396 VNMMTAQRTYQANAQTVKTQDQVMSTLVN 424


>gi|84514833|ref|ZP_01002196.1| hypothetical protein SKA53_11453 [Loktanella vestfoldensis SKA53]
 gi|84510992|gb|EAQ07446.1| hypothetical protein SKA53_11453 [Loktanella vestfoldensis SKA53]
          Length = 1778

 Score = 91.1 bits (224), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 70/169 (41%), Gaps = 5/169 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG--AIKNDIDQKISFVAS 61
           SF   L      +  +S  ++N++N  T GF+  + +F ++     ++N      S    
Sbjct: 2   SFYTALTGLNGAQSDISATSNNIANVGTTGFKRSRAEFGDIFATSPLQNSSSSIGSGAIL 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWF---ALESPRGIILTRDGRFKVTDDGSLVSAS 118
                    G+  S+   LD A+ G  +F     ++   ++ TR+G F V ++ ++V +S
Sbjct: 62  KGVKQQFTQGNIASSLNALDMAISGQGFFALKPSQTSTQVVYTRNGSFNVDNNRNVVDSS 121

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           G++ +    +    +  KD       +  ++       ++   +V++  
Sbjct: 122 GQFLLAYPVNEDGSVTAKDIDSAAPLRLPVTSGDPKATSLVDLAVNVPA 170



 Score = 80.7 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 34/98 (34%), Gaps = 5/98 (5%)

Query: 147  EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLED 201
              + + K +  + + + +   G  +  N+                 T     ++ G LE 
Sbjct: 1678 YTNGQNKPLGKIVMANFNNQNGLKQVGNATFVQTAESGDPIIGEAGTEGFGSIQSGALER 1737

Query: 202  SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            SN +   E+  +I   + F + +  I+ + +     I 
Sbjct: 1738 SNVDITEELVNLITAQRNFQAASKAIETSTQLTQTIIN 1775


>gi|30261751|ref|NP_844128.1| flagellar hook protein FlgE [Bacillus anthracis str. Ames]
 gi|47526975|ref|YP_018324.1| flagellar hook protein FlgE [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49184583|ref|YP_027835.1| flagellar hook protein FlgE [Bacillus anthracis str. Sterne]
 gi|65319023|ref|ZP_00391982.1| COG1749: Flagellar hook protein FlgE [Bacillus anthracis str.
           A2012]
 gi|165869249|ref|ZP_02213908.1| putative flagellar hook protein FlgE [Bacillus anthracis str.
           A0488]
 gi|167633465|ref|ZP_02391790.1| putative flagellar hook protein FlgE [Bacillus anthracis str.
           A0442]
 gi|167639152|ref|ZP_02397425.1| putative flagellar hook protein FlgE [Bacillus anthracis str.
           A0193]
 gi|170686150|ref|ZP_02877372.1| putative flagellar hook protein FlgE [Bacillus anthracis str.
           A0465]
 gi|170706520|ref|ZP_02896980.1| putative flagellar hook protein FlgE [Bacillus anthracis str.
           A0389]
 gi|177650602|ref|ZP_02933569.1| putative flagellar hook protein FlgE [Bacillus anthracis str.
           A0174]
 gi|190566422|ref|ZP_03019340.1| putative flagellar hook protein FlgE [Bacillus anthracis
           Tsiankovskii-I]
 gi|227815486|ref|YP_002815495.1| putative flagellar hook protein FlgE [Bacillus anthracis str. CDC
           684]
 gi|229600977|ref|YP_002866149.1| putative flagellar hook protein FlgE [Bacillus anthracis str.
           A0248]
 gi|254683244|ref|ZP_05147105.1| flagellar hook protein FlgE [Bacillus anthracis str. CNEVA-9066]
 gi|254723830|ref|ZP_05185616.1| flagellar hook protein FlgE [Bacillus anthracis str. A1055]
 gi|254734597|ref|ZP_05192309.1| flagellar hook protein FlgE [Bacillus anthracis str. Western North
           America USA6153]
 gi|254741006|ref|ZP_05198694.1| flagellar hook protein FlgE [Bacillus anthracis str. Kruger B]
 gi|254755249|ref|ZP_05207283.1| flagellar hook protein FlgE [Bacillus anthracis str. Vollum]
 gi|254759785|ref|ZP_05211809.1| flagellar hook protein FlgE [Bacillus anthracis str. Australia 94]
 gi|30255979|gb|AAP25614.1| putative flagellar hook protein FlgE [Bacillus anthracis str. Ames]
 gi|47502123|gb|AAT30799.1| putative flagellar hook protein FlgE [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49178510|gb|AAT53886.1| flagellar hook protein FlgE, putative [Bacillus anthracis str.
           Sterne]
 gi|164714689|gb|EDR20207.1| putative flagellar hook protein FlgE [Bacillus anthracis str.
           A0488]
 gi|167512942|gb|EDR88315.1| putative flagellar hook protein FlgE [Bacillus anthracis str.
           A0193]
 gi|167531503|gb|EDR94181.1| putative flagellar hook protein FlgE [Bacillus anthracis str.
           A0442]
 gi|170128618|gb|EDS97485.1| putative flagellar hook protein FlgE [Bacillus anthracis str.
           A0389]
 gi|170669847|gb|EDT20588.1| putative flagellar hook protein FlgE [Bacillus anthracis str.
           A0465]
 gi|172083746|gb|EDT68806.1| putative flagellar hook protein FlgE [Bacillus anthracis str.
           A0174]
 gi|190562557|gb|EDV16524.1| putative flagellar hook protein FlgE [Bacillus anthracis
           Tsiankovskii-I]
 gi|227006608|gb|ACP16351.1| putative flagellar hook protein FlgE [Bacillus anthracis str. CDC
           684]
 gi|229265385|gb|ACQ47022.1| putative flagellar hook protein FlgE [Bacillus anthracis str.
           A0248]
          Length = 437

 Score = 91.1 bits (224), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 61/181 (33%), Gaps = 13/181 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49
           M  +    +    A +  LS  ++N++N  TVG++  K  F +++               
Sbjct: 1   MIKALYTSITGMNAAQNALSVTSNNIANAQTVGYKKQKAIFDDLLYNNTVGSRGDGAYAG 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF--ALESPRGIILTRDGRFK 107
            +     + V           GS   T  +++ A+EG+  F     +   +  TR G F 
Sbjct: 61  TNPKSIGNGVKFSGTSTDFSDGSITLTSDKMETAIEGNGLFLVGDRNAGNVEYTRKGSFG 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           V+ D  + +  G+Y +        Q        +       S  G +         ++ +
Sbjct: 121 VSKDNYVTTTGGQYVLGYGVKTGTQEIDFSSRPSPIHIPMGSAVGGIQTDKATIGGNLPR 180

Query: 168 G 168
            
Sbjct: 181 N 181



 Score = 69.5 bits (168), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 18/144 (12%), Positives = 40/144 (27%), Gaps = 9/144 (6%)

Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
                   G  +S +         +    I     +      G +    KV+  + + + 
Sbjct: 298 SGLTNYPTGKTLSTTEVTGRPAAIANDYSISDGGFVMMKYSDGSM----KVVGQLAVATF 353

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
             S G ++  N                        V+    E SN +   E   ++   +
Sbjct: 354 PNSGGLMKTGNGNYVATPSAGIPGIGVAGENGAGNVRGSAKESSNVDLSVEFVDLMLYQR 413

Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242
            F     +I  +++ + E +  I 
Sbjct: 414 GFQGNAKVIKVSDEVLNEVVNLIR 437


>gi|187932866|ref|YP_001885049.1| flagellar hook protein FlgE [Clostridium botulinum B str. Eklund
           17B]
 gi|187721019|gb|ACD22240.1| flagellar hook protein FlgE [Clostridium botulinum B str. Eklund
           17B]
          Length = 366

 Score = 91.1 bits (224), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 57/168 (33%), Gaps = 44/168 (26%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++     + +L  + +N++N  T GF++   +FS+++     +         
Sbjct: 1   MLRSMYSGISGMKTNQVKLDVIGNNIANVSTTGFKSSSARFSDMLYQNAGEATAPTSTKG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--------- 99
                Q                G+ +STG  LD  ++GD +  +     +          
Sbjct: 61  GTNAKQVGLGAQLSSINKVMGQGNALSTGRSLDVCVDGDGYIMVSKGPEVYAGDKTGTGA 120

Query: 100 -----------------------LTRDGRFKVTDDGSLVSASGKYPVL 124
                                   TRDG F +  +G+L++A G   + 
Sbjct: 121 DTKNTIGISTSGKLTGGGENEILYTRDGNFTLDHEGNLLTADGYRVMG 168



 Score = 77.2 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 12/99 (12%), Positives = 30/99 (30%), Gaps = 15/99 (15%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPL---------------EDLSGVTVKRGFL 199
           +  + + +    +G      + +  +    P                         +G L
Sbjct: 264 LGQVAMATFKNPEGLTSIGGNLLQTSPNSGPEIIKTPVGKLATDFSDNSKGFGEFVQGAL 323

Query: 200 EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           E SN +   +   MI  T+ F + + +I   ++ +    
Sbjct: 324 ESSNVDLTEQFTDMITATRAFQASSKMITTGDEILQTIT 362


>gi|299822273|ref|ZP_07054159.1| flagellar hook protein FlgE [Listeria grayi DSM 20601]
 gi|299815802|gb|EFI83040.1| flagellar hook protein FlgE [Listeria grayi DSM 20601]
          Length = 411

 Score = 91.1 bits (224), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/148 (23%), Positives = 60/148 (40%), Gaps = 13/148 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49
           M  +    ++   A +Q LS  ++N++N +T G++   V F++++               
Sbjct: 1   MNQTMYTAISGMNAFQQALSVTSNNIANANTTGYKRQSVVFNDLLYQNTLGSVTSGLYAG 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107
            +     S    G        GS  +TG   D AL+G+ +F     S    + TRDG F 
Sbjct: 61  TNPMSFGSGTKIGAVITDYTAGSPTATGRNKDAALQGNGFFIAGDRSGGNAVYTRDGSFA 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQ 135
           V+ D  L + SGKY +         +  
Sbjct: 121 VSSDNFLTTQSGKYVMGYATDKNGNVID 148



 Score = 66.4 bits (160), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 19/142 (13%), Positives = 38/142 (26%), Gaps = 5/142 (3%)

Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
            F ++   +  +     P  D                             +A +G+ +  
Sbjct: 269 DFDLSKMTNYETEQVFSPSSDGKGAATVKDFAVTDAGYIAVSYSDGTIIPVAQLGVATFS 328

Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              G V+  N   +P +                 +    LE SN +   E   ++     
Sbjct: 329 NVDGLVKNGNGEYTPGLSSGDPVFGVAGQNGAGGISGASLEGSNVDLSQEFVNLMTYQSG 388

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           F   T +I   +  M + +  I
Sbjct: 389 FQGNTKVIRVADDVMKQIVNLI 410


>gi|228914332|ref|ZP_04077947.1| Flagellar hook protein FlgE [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228845326|gb|EEM90362.1| Flagellar hook protein FlgE [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 437

 Score = 91.1 bits (224), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 61/181 (33%), Gaps = 13/181 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49
           M  +    +    A +  LS  ++N++N  TVG++  K  F +++               
Sbjct: 1   MIKALYTSITGMNAAQNALSVTSNNIANAQTVGYKKQKAIFDDLLYNNTVGSRGDGAYAG 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF--ALESPRGIILTRDGRFK 107
            +     + V           GS   T  +++ A+EG+  F     +   +  TR G F 
Sbjct: 61  TNPKSIGNGVKFSGTSTDFSDGSITLTSDKMETAIEGNGLFLVGDRNGGNVEYTRKGSFS 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           V+ D  + +  G+Y +        Q        +       S  G +         ++ +
Sbjct: 121 VSKDSYVTNTGGQYVLGYGVKTGTQEVDFSSRPSPIHIPMGSAVGGIQTDKATIGGNLPR 180

Query: 168 G 168
            
Sbjct: 181 N 181



 Score = 69.5 bits (168), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 18/144 (12%), Positives = 44/144 (30%), Gaps = 9/144 (6%)

Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
                   G  +S +         +    I     +      G +    KV+  + + + 
Sbjct: 298 SGLTNYPTGKTLSTTEVTGRPAAIANDYSISDGGFVMMKYSDGSM----KVVGQLAVATF 353

Query: 164 DMSQGFVRR-ENSGISPNIPPTPLE----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
             S G ++    + ++      P      +     V+    E SN +   E   ++   +
Sbjct: 354 PNSGGLMKTGNGNYVATPSAGIPGVGVAGENGAGNVRGSAKESSNVDLSVEFVDLMLYQR 413

Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242
            F     +I  +++ + E +  I 
Sbjct: 414 GFQGNAKVIKVSDEVLNEVVNLIR 437


>gi|229144365|ref|ZP_04272771.1| Flagellar hook protein FlgE [Bacillus cereus BDRD-ST24]
 gi|228639152|gb|EEK95576.1| Flagellar hook protein FlgE [Bacillus cereus BDRD-ST24]
          Length = 437

 Score = 91.1 bits (224), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 62/181 (34%), Gaps = 13/181 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49
           M  +    +    A +  LS  ++N++N  TVG++  K  F +++               
Sbjct: 1   MIKALYTSITGMNAAQNALSVTSNNIANAQTVGYKKQKAIFDDLLYNNTVGSRGDGAYAG 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF--ALESPRGIILTRDGRFK 107
            +     + V           GS   T  +++ A+EG+  F     +   +  TR G F 
Sbjct: 61  TNPKSIGNGVKFSGTSTDFSDGSITLTSDKMETAIEGNGLFLVGDRNSGNVEYTRKGSFS 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           V+ D  + + SG+Y +        Q        +       S  G +         ++ +
Sbjct: 121 VSKDNYVTNTSGQYVLGYGVKTGTQEIDFSSRPSPIHIPMGSAVGGIQTDKATIGGNLPR 180

Query: 168 G 168
            
Sbjct: 181 N 181



 Score = 69.9 bits (169), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 18/144 (12%), Positives = 40/144 (27%), Gaps = 9/144 (6%)

Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
                   G  +S +         +    I     +      G +    KV+  + + + 
Sbjct: 298 SGLTNYPTGKTISTTEVTGRPAAIANDYSISDGGFVMMRYSDGSM----KVVGQLAVATF 353

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
             S G ++  N                        V+    E SN +   E   ++   +
Sbjct: 354 PNSGGLMKTGNGNYIATPSAGIPGIGVAGENGAGNVRGSAKESSNVDLSVEFVDLMLYQR 413

Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242
            F     +I  +++ + E +  I 
Sbjct: 414 GFQGNAKVIKVSDEVLNEVVNLIR 437


>gi|15964432|ref|NP_384785.1| flagellar hook protein FlgE [Sinorhizobium meliloti 1021]
 gi|307311574|ref|ZP_07591215.1| fagellar hook-basal body protein [Sinorhizobium meliloti BL225C]
 gi|20141447|sp|Q9X5Y0|FLGE_RHIME RecName: Full=Flagellar hook protein flgE
 gi|15073609|emb|CAC45251.1| Flagellar hook protein [Sinorhizobium meliloti 1021]
 gi|306899591|gb|EFN30220.1| fagellar hook-basal body protein [Sinorhizobium meliloti BL225C]
          Length = 406

 Score = 91.1 bits (224), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 2/163 (1%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
              G++   A   RLSTVA+N++N +T G++    +FS ++    N        V +   
Sbjct: 7   MRTGVSGMNAQSNRLSTVAENIANANTTGYKRASTEFSSMILPSGNGSYNSG-GVQTEVR 65

Query: 65  YLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASGKYPV 123
           Y   + G+   T +  D A++G  +F +E +     LTR G F    +G+LV+ASG   +
Sbjct: 66  YSISQQGATTFTTSASDLAIDGGGFFIVEGANGQEYLTRAGSFVPDSEGNLVNASGFTLM 125

Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
                  +        F+   +  ++  G + A     S+  +
Sbjct: 126 GYEYEAGVDPTVVVNGFDGLTRVNLASDGLIAAGSTKGSMGAN 168



 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 17/138 (12%), Positives = 39/138 (28%), Gaps = 7/138 (5%)

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           K T  G   +A G     +  S         +     +        +    + L +V   
Sbjct: 268 KTTQLGYAFNADGGSIDGNAPSKVAGYQIDSDGIVYVKYENGKLDPR--YRIALANVQSP 325

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFN 221
                   +  S  +    +      +     +  G LE SN +   E+  MI   + + 
Sbjct: 326 DKLRPESGNVYSQGVDSGVIITGFAGSGDFGEILSGALESSNVDIAEELTAMIESQRNYT 385

Query: 222 SITTLIDENEKSMLEAIR 239
           + + +     + +   + 
Sbjct: 386 ANSKVFQTGSELLEVLVN 403


>gi|251780952|ref|ZP_04823872.1| flagellar hook protein FlgE [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|243085267|gb|EES51157.1| flagellar hook protein FlgE [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 364

 Score = 91.1 bits (224), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 60/161 (37%), Gaps = 37/161 (22%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50
           M  S   G++   A + +L  + +N++N  T GF++   +F++++    +          
Sbjct: 1   MLRSMYSGISGMKANQVKLDVIGNNIANVSTTGFKSSSARFTDMLYQNTSSATAPTSTKG 60

Query: 51  --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP------------- 95
             +  Q                G+ +STG  LD  ++GD +  + +              
Sbjct: 61  GTNAKQVGLGAQLASINKVMGQGNALSTGRSLDVCVDGDGYLIVGTGPASYGGDDGTKGG 120

Query: 96  ------------RGIILTRDGRFKVTDDGSLVSASGKYPVL 124
                         I+ TRDG   +  +G+L++A G   + 
Sbjct: 121 TSIVNGSISGGDMDILYTRDGNLTLDHEGNLLTADGYRVMG 161



 Score = 76.1 bits (185), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 13/96 (13%), Positives = 30/96 (31%), Gaps = 12/96 (12%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTP------------LEDLSGVTVKRGFLEDS 202
           +  + + S    +G      + +  +    P                      +G LE S
Sbjct: 265 LGQVAMGSFKNPEGLTSVGGNLLEASSNSGPVIVKTSTGTTDGDNSKGFGDFIQGALEAS 324

Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           N +   +   MI  T+ F + + +I   ++ +    
Sbjct: 325 NVDLTEQFTDMITATRAFQASSKMISTADEILQTIT 360


>gi|57506151|ref|ZP_00372072.1| flagellar basal-body rod protein (flgG) [Campylobacter upsaliensis
           RM3195]
 gi|57015546|gb|EAL52339.1| flagellar basal-body rod protein (flgG) [Campylobacter upsaliensis
           RM3195]
          Length = 853

 Score = 91.1 bits (224), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 58/183 (31%), Gaps = 14/183 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G++   A +  +    +N+SN +T GF+  +  F  +                
Sbjct: 1   MMRSLWSGVSGMQAHQIAMDVEGNNISNVNTAGFKYSRADFGTMFSQTVKIATVPTENLG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106
             +  Q     +          GS  +T    D A+ GD +F +         LTRDG F
Sbjct: 61  GQNPLQIGLGTSINSTTRIHSQGSVQTTNKNTDVAINGDGFFMVSDDGGLTRYLTRDGDF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           K+   G+ V+ +G        +   Q                       +T      +++
Sbjct: 121 KLDAAGNFVNNAGFVVQGWNINWSDQSIDTSRSPKNLFIDPGLHIPAAKSTEVAVKANLN 180

Query: 167 QGF 169
            G 
Sbjct: 181 SGL 183



 Score = 69.1 bits (167), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 14/94 (14%), Positives = 35/94 (37%), Gaps = 5/94 (5%)

Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNAN 205
           K   +A + + SV  + G      +          +      T     +K   LE SN +
Sbjct: 757 KTFAVAKIAMASVANNSGLEEIGGNLFKVTGNSGNIVVGEAGTGGRGEMKTSALEMSNVD 816

Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
               + Q+I + + + + +  I  +++ +   ++
Sbjct: 817 LSRSLTQLIVVQRGYQANSKTISTSDQMLNTLLQ 850


>gi|145298491|ref|YP_001141332.1| flagellar hook protein FlgE [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142851263|gb|ABO89584.1| flagellar hook protein FlgE [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 446

 Score = 91.1 bits (224), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/130 (26%), Positives = 61/130 (46%), Gaps = 5/130 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK--NDIDQKISFVAS 61
           SFN  L+   A ++ L+  A+N++N +T+GF+  + +F++V       N   Q  + VA+
Sbjct: 2   SFNNALSGVNAAQKDLNVTANNIANVNTMGFKESRAEFADVYANSIFVNAKTQVGNGVAT 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI---ILTRDGRFKVTDDGSLVSAS 118
           G        G+   T   LD A++G+ +F             TR G FK+ ++  +V+  
Sbjct: 62  GAVAHQFHQGALQFTNNALDLAIQGNGFFVTSDGLTNLDRTYTRAGAFKLNENSYMVNNQ 121

Query: 119 GKYPVLDMAS 128
           G Y      +
Sbjct: 122 GHYLQGYEIN 131



 Score = 63.7 bits (153), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 13/90 (14%), Positives = 34/90 (37%), Gaps = 5/90 (5%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSNANSMYE 209
           +A + L     SQG  +  ++    +       P      +  ++K   +E SN +   +
Sbjct: 355 VAMVALAKFANSQGLTQVGDTSWRQSLLSGDALPGTPNSGTLGSIKSSAVEQSNVDLTSQ 414

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +  +I   + F + +  ++ N       ++
Sbjct: 415 LVNLITAQRNFQANSRSLEVNSSLQQTILQ 444


>gi|149911702|ref|ZP_01900310.1| flagellar hook protein FlgE [Moritella sp. PE36]
 gi|149805232|gb|EDM65249.1| flagellar hook protein FlgE [Moritella sp. PE36]
          Length = 435

 Score = 91.1 bits (224), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 68/169 (40%), Gaps = 5/169 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61
           SFNI L+   A ++ L+T A+N++N +T GF+  + +F +V       N      + VA+
Sbjct: 2   SFNIALSGINAAQKDLNTTANNIANVNTTGFKESRAEFGDVYATSIFSNAKTSVGNGVAT 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII---LTRDGRFKVTDDGSLVSAS 118
                  + GS   T   LD A+ G+ +F +      +    TR G FK+  +  + +++
Sbjct: 62  SHIAQQFQQGSLNFTENSLDLAINGNGFFVMADGLESMDRNYTRAGAFKLDANSFVTNSA 121

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           G Y  +   +                +   +            ++++  
Sbjct: 122 GNYLQVYDVNDDGSPKAVSMASTKPLQIPDTAGVPESTGNVDMTMNLPA 170



 Score = 66.8 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 15/123 (12%), Positives = 38/123 (30%), Gaps = 5/123 (4%)

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN- 180
              D A+V            +      + +   +  + +      QG  +  ++G   + 
Sbjct: 311 LEQDGATVGRLTGIDIGPDGMVLASYSNGRNDKLGMIAMAKFANEQGLSQTGDTGWRASQ 370

Query: 181 ----IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                        +   +    LE SN N   E+  +I   + + + +  ++ N K    
Sbjct: 371 LSGAAIAGEANSGTFGKINSSALEQSNVNLTSELVNLITAQRNYQANSRTLEVNSKLQDT 430

Query: 237 AIR 239
            ++
Sbjct: 431 VLQ 433


>gi|228933037|ref|ZP_04095900.1| Flagellar hook protein FlgE [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228826638|gb|EEM72409.1| Flagellar hook protein FlgE [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 437

 Score = 91.1 bits (224), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 61/181 (33%), Gaps = 13/181 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49
           M  +    +    A +  LS  ++N++N  TVG++  K  F +++               
Sbjct: 1   MIKALYTSITGMNAAQNALSVTSNNIANAQTVGYKKQKAIFDDLLYNNTVGSRGDGAYAG 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF--ALESPRGIILTRDGRFK 107
            +     + V           GS   T  +++ A+EG+  F     +   +  TR G F 
Sbjct: 61  TNPKSIGNGVKFSGTSTDFSDGSITLTSDKMETAIEGNGLFLVGDRNGGNVEYTRKGSFS 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           V+ D  + +  G+Y +        Q        +       S  G +         ++ +
Sbjct: 121 VSKDSYVTNTGGQYVLGYGVKTGTQEIDFSSRPSPIHIPMGSAVGGIQTDKATIGGNLPR 180

Query: 168 G 168
            
Sbjct: 181 N 181



 Score = 69.5 bits (168), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 18/144 (12%), Positives = 40/144 (27%), Gaps = 9/144 (6%)

Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
                   G  +S +         +    I     +      G +    KV+  + + + 
Sbjct: 298 SGLTNYPTGKTLSTTEVTGRPAAIANDYSISDGGFVMMKYSDGSM----KVVGQLAVATF 353

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
             S G ++  N                        V+    E SN +   E   ++   +
Sbjct: 354 PNSGGLMKTGNGNYVATPSAGIPGIGVAGENGAGNVRGSAKESSNVDLSVEFVDLMLYQR 413

Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242
            F     +I  +++ + E +  I 
Sbjct: 414 GFQGNAKVIKVSDEVLNEVVNLIR 437


>gi|311992301|gb|ADQ26724.1| flagellar hook protein [Aeromonas hydrophila]
          Length = 443

 Score = 91.1 bits (224), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 5/130 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK--NDIDQKISFVAS 61
           SFN  L+   A ++ L+  A+N++N +T GF+  + +F++V       N   Q  + VA+
Sbjct: 1   SFNNALSGVNAAQKDLNVTANNIANVNTTGFKESRAEFADVYANSIFVNAKTQVGNGVAT 60

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI---ILTRDGRFKVTDDGSLVSAS 118
           G        G+   T   LD +++G+ +F             TR G FK+ ++  +V+  
Sbjct: 61  GAVAQQFHQGALQFTNNALDLSIQGNGFFVTSDGLTNLDRTFTRAGAFKLNENSYMVNNQ 120

Query: 119 GKYPVLDMAS 128
           G Y      +
Sbjct: 121 GNYLQGYEIN 130



 Score = 65.3 bits (157), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 21/151 (13%), Positives = 47/151 (31%), Gaps = 9/151 (5%)

Query: 94  SPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK 153
            P   +  R G          V+        D A+V      +     +      +    
Sbjct: 295 DPTQTLEIRLGDVTQYSSPFNVT----KLTQDGATVGNLTKVEITPDGIVSATYSNATTL 350

Query: 154 VIATMGLYSVDMSQGFVRRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSNANSMY 208
            +A + L     SQG  +  ++    +       P      +  ++K   LE SN +   
Sbjct: 351 KVAMVALAKFANSQGLTQVGDTSWRQSLLSGDALPGTPNSGTLGSIKSSALEQSNVDLTS 410

Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           ++  +I   + F + +  ++ N       ++
Sbjct: 411 QLVNLITAQRNFQANSRSLEVNSSLQQTILQ 441


>gi|196033295|ref|ZP_03100707.1| putative flagellar hook protein FlgE [Bacillus cereus W]
 gi|195993729|gb|EDX57685.1| putative flagellar hook protein FlgE [Bacillus cereus W]
          Length = 437

 Score = 91.1 bits (224), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 71/222 (31%), Gaps = 20/222 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49
           M  +    +    A +  LS  ++N++N  TVG++  K  F +++               
Sbjct: 1   MIKALYTSITGMNAAQNALSVTSNNIANAQTVGYKKQKAIFDDLLYNNTVGSRGDGAYAG 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF--ALESPRGIILTRDGRFK 107
            +     + V           GS   T  +++ A+EG+  F     +   +  TR G F 
Sbjct: 61  TNPKSIGNVVKFSGTSTDFSDGSITLTSDKMETAIEGNGLFLVGDRNAGNVEYTRKGSFS 120

Query: 108 VTDDGSLVSASGKYPVL-------DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           V+ D  + +  G+Y +               +             G  + K  +   +  
Sbjct: 121 VSKDSYVTNTGGQYVLGYGVKTGTQEIDFSSRPSPIHIPMGSAVGGIQTDKATIGGNLPR 180

Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDS 202
               +S  F   +  G S  +     +     TV    +E  
Sbjct: 181 NQNALSHEFTVFDAEGNSLTLRVNIKQKTESETVDGKVVEKP 222



 Score = 69.5 bits (168), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 18/144 (12%), Positives = 40/144 (27%), Gaps = 9/144 (6%)

Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
                   G  +S +         +    I     +      G +    KV+  + + + 
Sbjct: 298 SGLTNYPTGKTLSTTEVTGRPAAIANDYSISDGGFVMMKYSDGSM----KVVGQLAVATF 353

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
             S G ++  N                        V+    E SN +   E   ++   +
Sbjct: 354 PNSGGLMKTGNGNYVATPSAGIPGIGVAGENGAGNVRGSAKESSNVDLSVEFVDLMLYQR 413

Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242
            F     +I  +++ + E +  I 
Sbjct: 414 GFQGNAKVIKVSDEVLNEVVNLIR 437


>gi|218461961|ref|ZP_03502052.1| flagellar hook protein FlgE [Rhizobium etli Kim 5]
          Length = 316

 Score = 91.1 bits (224), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 44/183 (24%), Positives = 74/183 (40%), Gaps = 10/183 (5%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           S    ++   A   RLSTVADN++N +T G++ +   FS +V       +     V +  
Sbjct: 6   SMKTAVSGMNAQANRLSTVADNIANVNTTGYKAVSTSFSSLVLPSSGG-NYNSGGVQTSV 64

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGKYP 122
                + G    T +  D A+ GD +F ++ P G  +LTR G F+  D+G+LV+A+G   
Sbjct: 65  RQAVSDQGDISYTTSTTDLAISGDGFFIVQGPDGTPVLTRAGDFQKDDEGNLVNAAGFQL 124

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
           +                  V   G        +   GL ++  + G  +      +   P
Sbjct: 125 MGYSY--------DSGAPAVVVNGFDGLVPVNVNQEGLTAIASTSGVFKGNLDSNAKVAP 176

Query: 183 PTP 185
             P
Sbjct: 177 VAP 179


>gi|117620743|ref|YP_857343.1| flagellar hook protein FlgE [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
 gi|117562150|gb|ABK39098.1| flagellar hook protein FlgE [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
          Length = 444

 Score = 91.1 bits (224), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 5/130 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK--NDIDQKISFVAS 61
           SFN  L+   A ++ L+  A+N++N +T GF+  + +F++V       N   Q  + VA+
Sbjct: 2   SFNNALSGVNAAQKDLNVTANNIANVNTTGFKESRAEFADVYANSIFVNAKTQVGNGVAT 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI---ILTRDGRFKVTDDGSLVSAS 118
           G        G+   T   LD +++G+ +F             TR G FK+ ++  +V+  
Sbjct: 62  GAVAQQFHQGALQFTNNALDLSIQGNGFFVTSDGLTNLDRTFTRAGAFKLNENSYMVNNQ 121

Query: 119 GKYPVLDMAS 128
           G Y      +
Sbjct: 122 GNYLQGYEIN 131



 Score = 65.3 bits (157), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 21/151 (13%), Positives = 47/151 (31%), Gaps = 9/151 (5%)

Query: 94  SPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK 153
            P   +  R G          V+        D A+V      +     +      +    
Sbjct: 296 DPAQTLEIRLGDVTQYSSPFNVT----KLTQDGATVGNLTKVEITPDGIVSATYSNATTL 351

Query: 154 VIATMGLYSVDMSQGFVRRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSNANSMY 208
            +A + L     SQG  +  ++    +       P      +  ++K   LE SN +   
Sbjct: 352 KVAMVALAKFANSQGLTQVGDTSWRQSLLSGDALPGTPNSGTLGSIKSSALEQSNVDLTS 411

Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           ++  +I   + F + +  ++ N       ++
Sbjct: 412 QLVNLITAQRNFQANSRSLEVNSSLQQTILQ 442


>gi|330953723|gb|EGH53983.1| flagellar hook protein FlgE [Pseudomonas syringae Cit 7]
          Length = 581

 Score = 91.1 bits (224), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 55/133 (41%), Gaps = 3/133 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SFN  ++   A  +RL    +N++N  T+GF++ + +FS +  + +    Q         
Sbjct: 2   SFNTAISGIQAANKRLEVAGNNIANVGTLGFKSSRAQFSALYASAQLGAGQHAVGDGVRL 61

Query: 64  EYLSKEVGSFI---STGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
             + +         S+G  LD  ++G+ +F +     +  TR G F       +V + G 
Sbjct: 62  ASVQQNFNQGETVISSGNALDMRIQGNGFFVVSDQGSLAYTRAGAFLKDAANFVVDSDGG 121

Query: 121 YPVLDMASVPIQI 133
                 A+   +I
Sbjct: 122 RLQGYAANDKGEI 134



 Score = 74.1 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 31/99 (31%), Gaps = 5/99 (5%)

Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLE 200
           G  +   K I  + L S     G   R ++  +        E       +   +  G LE
Sbjct: 481 GFTNGMTKDIGQVMLASFANPHGLQPRSDTRWTATADSGVAEYDVPGVGTLGGIVSGALE 540

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            SN     E+  +I     + + +  I      M   I+
Sbjct: 541 GSNVVLADELIALIQAQTAYQANSKAISTEVTLMQTLIQ 579


>gi|196044997|ref|ZP_03112230.1| putative flagellar hook protein FlgE [Bacillus cereus 03BB108]
 gi|300117326|ref|ZP_07055116.1| flagellar hook protein FlgE [Bacillus cereus SJ1]
 gi|196023999|gb|EDX62673.1| putative flagellar hook protein FlgE [Bacillus cereus 03BB108]
 gi|298725161|gb|EFI65813.1| flagellar hook protein FlgE [Bacillus cereus SJ1]
          Length = 437

 Score = 91.1 bits (224), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 61/181 (33%), Gaps = 13/181 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49
           M  +    +    A +  LS  ++N++N  TVG++  K  F +++               
Sbjct: 1   MIKALYTSITGMNAAQNALSVTSNNIANAQTVGYKKQKAIFDDLLYNNTVGSRGDGAYAG 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF--ALESPRGIILTRDGRFK 107
            +     + V           GS   T  +++ A+EG+  F     +   +  TR G F 
Sbjct: 61  TNPKSIGNGVKFSGTSTDFSDGSITLTSDKMETAIEGNGLFLVGDRNAGNVEYTRKGSFG 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           V+ D  + +  G+Y +        Q        +       S  G +         ++ +
Sbjct: 121 VSKDNYVTTTGGQYVLGYGVKTGTQEIDFSSRPSPIHIPMGSAVGGIQTDKATIGGNLPR 180

Query: 168 G 168
            
Sbjct: 181 N 181



 Score = 69.1 bits (167), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 18/144 (12%), Positives = 40/144 (27%), Gaps = 9/144 (6%)

Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
                   G  +S +         +    I     +      G +    KV+  + + + 
Sbjct: 298 SGLTNYPTGKTLSTTEVTGRPAAIANDYSISDGGFVMMKYSDGSM----KVVGQLAVATF 353

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
             S G ++  N                        V+    E SN +   E   ++   +
Sbjct: 354 PNSGGLMKTGNGNYVATPSAGIPGIGVAGENGAGNVRGSAKESSNVDLSVEFVDLMLYQR 413

Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242
            F     +I  +++ + E +  I 
Sbjct: 414 GFQGNAKVIKVSDEVLNEVVNLIR 437


>gi|296502373|ref|YP_003664073.1| flagellar basal body rod protein FlgG [Bacillus thuringiensis
           BMB171]
 gi|296323425|gb|ADH06353.1| flagellar basal body rod protein FlgG [Bacillus thuringiensis
           BMB171]
          Length = 246

 Score = 91.1 bits (224), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 43/244 (17%), Positives = 81/244 (33%), Gaps = 15/244 (6%)

Query: 13  LALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DIDQKISFVASGKE 64
           +   QR++  ++N++N  T GF+   +        +          +I      V     
Sbjct: 1   MNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIGSVDYAVVPAAT 60

Query: 65  YLSKEVGSFISTGTELDF-----ALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119
           +++   G+   T +  DF     A    ++F         LTRDG F +  D  L ++SG
Sbjct: 61  HVNLVQGNIQMTNSATDFFLDDGAAGTTSFFVTSKNDETFLTRDGSFTLNSDRYLQTSSG 120

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG--FVRRENSGI 177
            + + +                             IA +   +VD       V+REN   
Sbjct: 121 AFVMGENNERIRIPEGAKVAVQADGTLYDEVTQNNIARLQTKTVDAETNARLVQRENKSF 180

Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
           +               VK   LE+SN +   EM  ++   +   +   ++   +K   + 
Sbjct: 181 TLAEGNIANLPNGTGIVKNHMLENSNVDMTKEMADLMTDQKMIQASQRVMTSFDKIYEKE 240

Query: 238 IRNI 241
              I
Sbjct: 241 ANEI 244


>gi|219670133|ref|YP_002460568.1| hypothetical protein Dhaf_4123 [Desulfitobacterium hafniense DCB-2]
 gi|219540393|gb|ACL22132.1| protein of unknown function DUF1078 domain protein
           [Desulfitobacterium hafniense DCB-2]
          Length = 329

 Score = 91.1 bits (224), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 57/146 (39%), Gaps = 13/146 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55
               N       A +  L  + +NMSN +T G++  +V F+E + A     +++      
Sbjct: 1   MRILNTAATGVRAQQTALDVLGNNMSNVNTPGYKAQRVNFAEALAAEMRPAEREFNGQPV 60

Query: 56  ------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKV 108
                  + V           G    T    D A++G+ +F + +  G    TR G F++
Sbjct: 61  GERIDVGAGVIYPTIDTDYRQGIIRETENPFDLAIDGEGFFPVRTANGESRYTRVGNFEL 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIP 134
              G LV++ G    + + +  + + 
Sbjct: 121 DSQGKLVNSDGYILEVKIPADAMDLY 146



 Score = 74.9 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 21/149 (14%), Positives = 48/149 (32%), Gaps = 14/149 (9%)

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
             + + G  +  +G        +VP                 I    + +  + + +   
Sbjct: 182 IDMDELGRPLDWNGDILP-TAFAVPEGAEDVQISTEGILSATIDGSRQTLGQINIITFAN 240

Query: 166 SQGFVRRENSGISPNI------------PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQM 213
            +G VR  ++                  P + +E+ +   +K   LE SN N    M +M
Sbjct: 241 PEGLVRDGDNLYFAPDAAGVTGDELVGTPGSQVEERTLGKLKTQSLEQSNVNLASAMTEM 300

Query: 214 IHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           I + + +     +I   ++ M     ++ 
Sbjct: 301 IQVQRAYQLNARMITNGDQ-MWSMANSLR 328


>gi|326204617|ref|ZP_08194473.1| fagellar hook-basal body protein [Clostridium papyrosolvens DSM
           2782]
 gi|325985184|gb|EGD46024.1| fagellar hook-basal body protein [Clostridium papyrosolvens DSM
           2782]
          Length = 443

 Score = 90.7 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 53/147 (36%), Gaps = 16/147 (10%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++   A + ++  + +N++N +T+GF+  +V F E+                
Sbjct: 1   MMRSMFSGVSGLKAHQAKMDVIGNNVANVNTLGFKAGRVTFQEIFNQTLRGAGAPDAATA 60

Query: 54  -------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDG 104
                  Q    +A G        GS   T    D ++ G+ +F ++         TR G
Sbjct: 61  RGGTNPMQIGLGIAVGSIDNQMTGGSPQRTDNPTDLSISGNGFFIVKGSAADTFKFTRAG 120

Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPI 131
            F +   G+LVS  G            
Sbjct: 121 NFGLDKLGNLVSGDGMNVYGWTKYEQQ 147



 Score = 86.8 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 17/123 (13%), Positives = 40/123 (32%), Gaps = 6/123 (4%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
            ++  +    +        +      + + + +  + L   D   G  +   +   P   
Sbjct: 318 NINGYTTGNLVTFNIGSDGMITGVYSNGQQQPLGLIALAGFDNPAGLQKVGGNLFMPTTN 377

Query: 183 ------PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                   P       T+  G LE SN +   E   MI   + F + + +I  +++ + E
Sbjct: 378 SGDFNKGVPAGSQGVGTLSPGTLEMSNVDLSREFTDMIVTQRGFQANSRIITTSDEMLQE 437

Query: 237 AIR 239
            + 
Sbjct: 438 LVN 440


>gi|255099422|ref|ZP_05328399.1| flagellar hook protein [Clostridium difficile QCD-63q42]
          Length = 327

 Score = 90.7 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 36/87 (41%), Gaps = 1/87 (1%)

Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIP-PTPLEDLSGVTVKRGFLEDSNANSMYEMGQ 212
            I  +  Y+     G      +   P+     P    +  T+ +G +E SN +   E  +
Sbjct: 238 TIQKVQTYAFQNPAGLDAEGGNLFKPSANSGDPQIAGATGTIIQGAIEASNVDIAEEFTE 297

Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIR 239
           MI  ++ F + + +I  +++ + E I 
Sbjct: 298 MIIASRSFQANSKIISTSDEILQEIIN 324



 Score = 89.2 bits (219), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 49/143 (34%), Gaps = 17/143 (11%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  +   G++   A + +L  + +N++N  T  F+    + ++                 
Sbjct: 1   MIKAMYSGVSGMKANQTKLDVIGNNVANAGTTSFKKSSARITDSFYQTVLYASAPTAALG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
             ++ Q                G+   T    D  ++GD +  +     ++ TRDG F +
Sbjct: 61  GTNLGQVGVGSKISSINKDMVQGNVQPTNRPSDLMIDGDGYLPVVRQGTVMYTRDGSFNL 120

Query: 109 T-----DDGSLVSASGKYPVLDM 126
                  DG+L +  G   V   
Sbjct: 121 DTGFKAADGALKNIKGGRLVNGD 143


>gi|157961171|ref|YP_001501205.1| flagellar hook protein FlgE [Shewanella pealeana ATCC 700345]
 gi|157846171|gb|ABV86670.1| flagellar basal body FlaE domain protein [Shewanella pealeana ATCC
           700345]
          Length = 453

 Score = 90.7 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 72/185 (38%), Gaps = 5/185 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61
           SFNI L+   + ++ L+T A+N++N +T GF+  + +F++V  +    N        VA+
Sbjct: 2   SFNIALSGISSAQKDLNTTANNIANVNTTGFKESRAEFADVYASSIFANSKTTVGGGVAT 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESP---RGIILTRDGRFKVTDDGSLVSAS 118
            +       GS   T   LD A+ G  +F   S    +    TR G FK   +  +V ++
Sbjct: 62  SQVAQQFHQGSMQFTNNSLDMAINGGGFFVTSSEVGSQDHSFTRAGAFKFDSNNYIVDSA 121

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178
           G +                       +   +    V        ++++ G    + +   
Sbjct: 122 GNFLQTFPVDKDGNSTSVSLTTTKPVQIPDTAGSPVKTDQVGIQMNLNAGESTLDPAAFD 181

Query: 179 PNIPP 183
           P+ P 
Sbjct: 182 PDDPE 186



 Score = 69.1 bits (167), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 15/91 (16%), Positives = 35/91 (38%), Gaps = 5/91 (5%)

Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMY 208
            +A + L S    QG  +  N+    ++   P         +  +++   LE SN +   
Sbjct: 361 PLARVALVSFANEQGLSQAGNTSWKASLDSGPALAGEANSGTFGSIRSSALEQSNVDLTT 420

Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           E+  +I   + F + +  ++ N       ++
Sbjct: 421 ELVDLISAQRNFQANSRTLEVNNTLQQTVLQ 451


>gi|120598232|ref|YP_962806.1| flagellar hook protein FlgE [Shewanella sp. W3-18-1]
 gi|120558325|gb|ABM24252.1| flagellar basal body FlaE domain protein [Shewanella sp. W3-18-1]
          Length = 453

 Score = 90.7 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/125 (32%), Positives = 61/125 (48%), Gaps = 5/125 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61
           SFNI L+   A ++ L+T A+N++N +TVGF+  + +F++V       N        VA+
Sbjct: 2   SFNIALSGISAAQKDLNTTANNIANANTVGFKESRAEFADVYANSIFSNSKTAVGGGVAT 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII---LTRDGRFKVTDDGSLVSAS 118
            +       GS   T   LD A++G  +F   S  G +    TR G FKV     +V +S
Sbjct: 62  SQVAQQFHQGSLQLTNNSLDLAIKGGGFFVTSSELGTLDFSYTRAGAFKVDASNYMVDSS 121

Query: 119 GKYPV 123
           G Y  
Sbjct: 122 GNYLQ 126



 Score = 65.7 bits (158), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 33/91 (36%), Gaps = 5/91 (5%)

Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMY 208
            +A + L      QG  +  N+    ++   P         +  ++    LE SN +   
Sbjct: 361 PLARVALVRFANEQGLTQVGNTSWKASLNSGPALAGEANSGTFGSISSSALEQSNIDLTT 420

Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           E+  +I   + F + +  ++ N       ++
Sbjct: 421 ELVDLISAQRNFQANSRTLEVNNTLQQTVLQ 451


>gi|196039080|ref|ZP_03106387.1| putative flagellar hook protein FlgE [Bacillus cereus NVH0597-99]
 gi|196030225|gb|EDX68825.1| putative flagellar hook protein FlgE [Bacillus cereus NVH0597-99]
          Length = 437

 Score = 90.7 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 61/181 (33%), Gaps = 13/181 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49
           M  +    +    A +  LS  ++N++N  TVG++  K  F +++               
Sbjct: 1   MIKALYTSITGMNAAQNALSVTSNNIANAQTVGYKKQKAIFDDLLYNNTVGSRGDGAYAG 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF--ALESPRGIILTRDGRFK 107
            +     + V           GS   T  +++ A+EG+  F     +   +  TR G F 
Sbjct: 61  TNPKSIGNGVKFSGTSTDFSDGSITLTSDKMETAIEGNGLFLVGDRNAGNVEYTRKGSFS 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           V+ D  + +  G+Y +        Q        +       S  G +         ++ +
Sbjct: 121 VSKDSYVTNTGGQYVLGYGVKTGTQEVDFSSRPSPIHIPMGSAVGGIQTDKATIGGNLPR 180

Query: 168 G 168
            
Sbjct: 181 N 181



 Score = 69.5 bits (168), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 18/144 (12%), Positives = 40/144 (27%), Gaps = 9/144 (6%)

Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
                   G  +S +         +    I     +      G +    KV+  + + + 
Sbjct: 298 SGLTNYPTGKTLSTTEVTGRPAAIANDYSISDGGFVMMKYSDGSM----KVVGQLAVATF 353

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
             S G ++  N                        V+    E SN +   E   ++   +
Sbjct: 354 PNSGGLMKTGNGNYVATPSAGIPGIGVAGENGAGNVRGSAKESSNVDLSVEFVDLMLYQR 413

Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242
            F     +I  +++ + E +  I 
Sbjct: 414 GFQGNAKVIKVSDEVLNEVVNLIR 437


>gi|317152826|ref|YP_004120874.1| flagellar hook-basal body protein [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316943077|gb|ADU62128.1| flagellar hook-basal body protein [Desulfovibrio aespoeensis
           Aspo-2]
          Length = 515

 Score = 90.7 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/193 (19%), Positives = 64/193 (33%), Gaps = 13/193 (6%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI---KNDIDQKISFVA 60
           S   G++   A  Q  S V++N++N+ T  +++  + F +V  +       + Q  + V 
Sbjct: 6   SMYTGISGLKAQSQATSVVSNNLANSTTTAYKSSSITFEDVFYSTVYAGGSVGQVGNGVT 65

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR--GIILTRDGRFKVTDDGSLVSAS 118
                     GS+ ST +  D A+ G+ ++ +  P       TR G F    +G L  A 
Sbjct: 66  VASVNTDYSQGSYESTNSATDVAINGNGFYVVIDPDTGNTYYTRAGNFTFNTEGYLEDAH 125

Query: 119 GKYPVLDMASV--------PIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170
           G        +          I I Q     N   +   S       T    S       +
Sbjct: 126 GNKVQGWAMNDGSIEGTLTDIVIDQSQSPPNATSEVGFSLNLDSTETDHTTSATNPYAAL 185

Query: 171 RRENSGISPNIPP 183
                G +     
Sbjct: 186 FEAYDGTADPALG 198



 Score = 68.0 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 19/121 (15%), Positives = 43/121 (35%), Gaps = 5/121 (4%)

Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183
            D  +  + I    +   V      + + + + T+ L +   +QG   + ++  S     
Sbjct: 392 QDGYAPGVLINVAIDENGVLSGEYTNGQTQELYTIALANFTNTQGLSSQGSNLYSATTES 451

Query: 184 TPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
                         T+    LE SN ++  E+ ++I L   + +   +I   +  +  AI
Sbjct: 452 GQAFIGTPGSAGFGTIASNSLEQSNVDTATELTKLIILQAAYQANAKVITTADTLLSAAI 511

Query: 239 R 239
            
Sbjct: 512 S 512


>gi|301053291|ref|YP_003791502.1| flagellar hook protein [Bacillus anthracis CI]
 gi|300375460|gb|ADK04364.1| flagellar hook protein [Bacillus cereus biovar anthracis str. CI]
          Length = 437

 Score = 90.7 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 61/181 (33%), Gaps = 13/181 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49
           M  +    +    A +  LS  ++N++N  TVG++  K  F +++               
Sbjct: 1   MIKALYTSITGMNAAQNALSVTSNNIANAQTVGYKKQKAIFDDLLYNNTVGSRGDGAYAG 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF--ALESPRGIILTRDGRFK 107
            +     + V           GS   T  +++ A+EG+  F     +   +  TR G F 
Sbjct: 61  TNPKSIGNGVKFSGTSTDFSDGSITLTSDKMETAIEGNGLFLVGDRNAGNVEYTRKGSFG 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           V+ D  + +  G+Y +        Q        +       S  G +         ++ +
Sbjct: 121 VSKDNYVTTTGGQYVLGYGVKTGTQEIDFSSRPSPIHIPMGSAVGGIQTDKATIGGNLPR 180

Query: 168 G 168
            
Sbjct: 181 N 181



 Score = 69.1 bits (167), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 18/144 (12%), Positives = 40/144 (27%), Gaps = 9/144 (6%)

Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
                   G  +S +         +    I     +      G +    KV+  + + + 
Sbjct: 298 SGLTNYPTGKTLSTTEVTGRPAAIANDYSISDGGFVMMKYSDGSM----KVVGQLAVATF 353

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
             S G ++  N                        V+    E SN +   E   ++   +
Sbjct: 354 PNSGGLMKTGNGNYVATPSAGIPGIGVAGENGAGNVRGSAKESSNVDLSVEFVDLMLYQR 413

Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242
            F     +I  +++ + E +  I 
Sbjct: 414 GFQGNAKVIKVSDEVLNEVVNLIR 437


>gi|320353949|ref|YP_004195288.1| flagellar hook-basal body protein [Desulfobulbus propionicus DSM
           2032]
 gi|320122451|gb|ADW17997.1| flagellar hook-basal body protein [Desulfobulbus propionicus DSM
           2032]
          Length = 423

 Score = 90.7 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 66/170 (38%), Gaps = 5/170 (2%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI---KNDIDQKISFV 59
           ++    ++      Q ++   +N++N+ TVGF+T    FS+++ A     +   Q     
Sbjct: 5   SALFTAISGLQGSSQAMTVTGNNIANSSTVGFKTSSTVFSDLLSANIASSSGNSQVGRGS 64

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP--RGIILTRDGRFKVTDDGSLVSA 117
                  S   G F ST +  D A+EG  +F +  P     + TR+G F   DDG LV+A
Sbjct: 65  QVQTVQTSFSQGGFESTESATDIAIEGSGFFIVGDPLSDTSLYTRNGNFSFDDDGYLVTA 124

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
            G        +    +   +      +     +  +        ++D + 
Sbjct: 125 DGYRVQGSTYNANGVLASGNLSDIQVDLVSQIKAKRTENVTLQTNLDSNS 174



 Score = 74.9 bits (182), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 19/146 (13%), Positives = 42/146 (28%), Gaps = 4/146 (2%)

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           T+   +          ++      D  +                    + +   +A + L
Sbjct: 278 TQQLAYVFDTTQFDSDSTVFSQDQDGYASGEVTDVDIAADGTVSAVYSNGETIPVAMIAL 337

Query: 161 YSVDMSQGFVRRENSGISPN----IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
            +   S G     +S          P       S  T+    LE SN +   E   +I +
Sbjct: 338 ATFINSDGLDAVGSSLYRETGESGTPTIGYPGASQGTLITQALELSNVDLATEFVDLITI 397

Query: 217 TQKFNSITTLIDENEKSMLEAIRNIA 242
              +++ + +I    + + E +  I 
Sbjct: 398 QNAYSANSKVITTTNEMLDELVNLIR 423


>gi|126668558|ref|ZP_01739512.1| flagellar hook protein E [Marinobacter sp. ELB17]
 gi|126626963|gb|EAZ97606.1| flagellar hook protein E [Marinobacter sp. ELB17]
          Length = 435

 Score = 90.7 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 65/157 (41%), Gaps = 2/157 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA--IKNDIDQKISFVAS 61
           +FN GL+   A    L    +N++N  TVGF+  +V+F ++     + +        ++ 
Sbjct: 2   AFNTGLSGLRAAAVDLDVTGNNIANASTVGFKGSRVQFGDLYANGFLSSGNAPVGDGISV 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
                S   G+   T   LDFA++GD +F L +   +  +R G+F    DG +V+     
Sbjct: 62  QSVKQSFGQGNVSFTDNGLDFAIDGDGFFVLNNGGELRYSRAGQFGTDKDGFVVNNQNMR 121

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158
               +A     +    +   +G      Q+   + T 
Sbjct: 122 VQGFVADAAGNLSGIRDDLQIGSDNLSPQRTTNLRTD 158



 Score = 73.0 bits (177), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 11/98 (11%), Positives = 34/98 (34%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLED 201
             + + K +  + L S + + G     ++                +  +   ++   +E+
Sbjct: 336 YTNGQSKSLGQVALASFNNTDGLSPSGDTSWVETFESGQAVIGRPDSGTLGAIQSSSVEE 395

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E+  +I   + + +    I+ ++      I 
Sbjct: 396 SNVDLSAELVNLIIAQRNYQANAKTIETSDAVTQTIIN 433


>gi|57505769|ref|ZP_00371695.1| flagellar basal-body rod protein (flgG) [Campylobacter upsaliensis
           RM3195]
 gi|57016042|gb|EAL52830.1| flagellar basal-body rod protein (flgG) [Campylobacter upsaliensis
           RM3195]
          Length = 545

 Score = 90.7 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 45/217 (20%), Positives = 80/217 (36%), Gaps = 11/217 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI----KNDIDQKI 56
           M  +F  G++        +   A+N++N +T GF+    +F ++  +       +  Q  
Sbjct: 1   MMGAFYNGISGVKINSFGIDISANNIANVNTTGFKYSNAEFKDIFYSTITSQSTNPAQGG 60

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLV 115
               S    L  E GS +++  E D AL+G  +F +  +      TR+G FK   +G LV
Sbjct: 61  YGSTSASSKLVFEQGSPVASEGEFDVALQGKGFFGVLGADGMPYYTRNGAFKRDANGHLV 120

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
            + G + +  M      I   D +   G  G+    G  +      + +         + 
Sbjct: 121 DSYGNFVLGTMNPAFQGITYSDRV--AGLMGDYLNTGTPVNNGFTVNSNDKFTLGTTGSQ 178

Query: 176 GISPNIPPTPLEDLSGVTVKR-GFLEDSNANSMYEMG 211
           G         L       V+  G L   N N+  E+ 
Sbjct: 179 GALQVPINMYLPPKVTQNVQWKGNL---NTNTKTEVV 212



 Score = 76.1 bits (185), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 41/96 (42%), Gaps = 7/96 (7%)

Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPP-------TPLEDLSGVTVKRGFLEDSN 203
           +  ++  + LY+    QG +   ++  +               E ++    K GFLE SN
Sbjct: 447 QTAIVGKIALYNFINEQGLMAMGDNIFAATGNSGEASFIMKDGEIVNTAKFKGGFLEQSN 506

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            N   E+  +I   + F++ +  I  +++ + +AI 
Sbjct: 507 VNLSMELSNLIVTQRAFDASSKSITTSDQMIQKAIN 542


>gi|190890382|ref|YP_001976924.1| flagellar hook protein [Rhizobium etli CIAT 652]
 gi|190695661|gb|ACE89746.1| flagellar hook protein [Rhizobium etli CIAT 652]
          Length = 433

 Score = 90.7 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 2/125 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           S    ++   A   RLSTV+DN++N +T G++ +   FS +V       +     V +  
Sbjct: 6   SMKTAVSGMNAQANRLSTVSDNIANVNTTGYKAVSTSFSSLVLPSSGG-NYNSGGVQTSV 64

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGKYP 122
                + G    T +  D A+ GD +F ++ P G  +LTR G F   D+G+LV+A+G   
Sbjct: 65  RQAVSDQGDISYTTSTTDLAISGDGFFIVQGPDGTPVLTRAGDFTKDDEGNLVNAAGFQL 124

Query: 123 VLDMA 127
           +    
Sbjct: 125 MGYSY 129



 Score = 73.4 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 17/121 (14%), Positives = 35/121 (28%), Gaps = 1/121 (0%)

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178
                  +  V I               +   +  +        + +  G V   N    
Sbjct: 311 NGQAATPVKDVTIDGDGIVYAKYEDGSTKPLYRIPLANVASPDKLTLMSGNVYSANGQSG 370

Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
             +   P  +    T+K G LE SN +   E+ +MI   + + + + +       M   +
Sbjct: 371 VTVTGFPQTNG-LGTIKSGALEGSNVDLAGELTEMIEAQRSYTANSKVFQTGSDIMDVLV 429

Query: 239 R 239
            
Sbjct: 430 N 430


>gi|188587648|ref|YP_001920210.1| flagellar hook protein FlgE [Clostridium botulinum E3 str. Alaska
           E43]
 gi|188497929|gb|ACD51065.1| flagellar hook protein FlgE [Clostridium botulinum E3 str. Alaska
           E43]
          Length = 366

 Score = 90.7 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 58/168 (34%), Gaps = 44/168 (26%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++     + +L  + +N++N  T GF++   +FS+++    ++         
Sbjct: 1   MLRSMYSGISGMKTNQVKLDVIGNNIANVSTTGFKSSSARFSDMLYQNASEATAPTSTKG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--------- 99
                Q                G+ +STG  LD  ++GD +  +     +          
Sbjct: 61  GTNAKQVGLGSQLSSINKVMGQGNALSTGRSLDVCVDGDGYIMVSKGPEVYAADKTGTGA 120

Query: 100 -----------------------LTRDGRFKVTDDGSLVSASGKYPVL 124
                                   TRDG F +  +G+L++A G   + 
Sbjct: 121 DAKNTIGISTSGKLTGGGENEILYTRDGNFTLDHEGNLLTADGYRVMG 168



 Score = 76.8 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 12/99 (12%), Positives = 30/99 (30%), Gaps = 15/99 (15%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPL---------------EDLSGVTVKRGFL 199
           +  + + +    +G      + +  +    P                         +G L
Sbjct: 264 LGQVAMATFKNPEGLTSIGGNLLQTSPNSGPEIIKTPVGKLATDFSDNSKGFGEFVQGAL 323

Query: 200 EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           E SN +   +   MI  T+ F + + +I   ++ +    
Sbjct: 324 ESSNVDLTEQFTDMITATRAFQASSKMITTGDEILQTIT 362


>gi|330967091|gb|EGH67351.1| flagellar hook protein FlgE [Pseudomonas syringae pv. actinidiae
           str. M302091]
          Length = 586

 Score = 90.7 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 57/134 (42%), Gaps = 3/134 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG- 62
           SFN  ++   A  +RL    +N++N+ TVGF++ + +FS +  + +    +         
Sbjct: 2   SFNTAISGINAANKRLEVAGNNIANSGTVGFKSSRAQFSALYSSAQLGSGRNAIGDGVRL 61

Query: 63  --KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
              +    +  S  ++G  LD  ++G+ +F +     +  TR G F       +V + G 
Sbjct: 62  AATQQNFNQGDSMTTSGNPLDMRIQGNGFFVVSDKGSLAYTRAGAFLKDAANFVVDSEGG 121

Query: 121 YPVLDMASVPIQIP 134
                 A+   +I 
Sbjct: 122 RLQGYAANDKGEIM 135



 Score = 69.1 bits (167), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 35/99 (35%), Gaps = 5/99 (5%)

Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLE 200
           G  +   K I  + L S   +QG   R ++  + +      +       +  ++  G LE
Sbjct: 486 GFTNGMNKSIGQVILASFANAQGLQARSDTRWTESAESGVADYEVPGVGTLGSLVGGALE 545

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            SN     E+  +I     + + +  I      M   I+
Sbjct: 546 GSNVVLADELIALIQAQTAYQANSKAISTEATVMQTLIQ 584


>gi|126697826|ref|YP_001086723.1| flagellar hook protein [Clostridium difficile 630]
 gi|115249263|emb|CAJ67076.1| Flagellar hook protein FlgE (Distal rod protein) [Clostridium
           difficile]
          Length = 327

 Score = 90.7 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 37/87 (42%), Gaps = 1/87 (1%)

Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIP-PTPLEDLSGVTVKRGFLEDSNANSMYEMGQ 212
            I  + +Y+     G      +   P+     P    +  T+ +G +E SN +   E  +
Sbjct: 238 TIQKVQIYAFQNPAGLDAAGGNLFKPSANSGDPQIAGATGTIIQGAIEASNVDIAEEFTE 297

Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIR 239
           MI  ++ F + + +I  +++ + E I 
Sbjct: 298 MIIASRSFQANSKIISTSDEILQEIIN 324



 Score = 89.2 bits (219), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 49/143 (34%), Gaps = 17/143 (11%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  +   G++   A + +L  + +N++N  T  F+    + ++                 
Sbjct: 1   MIKAMYSGVSGMKANQTKLDVIGNNVANAGTTSFKKSSARITDSFYQTVLYASAPTAALG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
             ++ Q                G+   T    D  ++GD +  +     ++ TRDG F +
Sbjct: 61  GTNLGQVGVGSKISSINKDMVQGNVQPTNRPSDLMIDGDGYLPVVRQGTVMYTRDGSFNL 120

Query: 109 T-----DDGSLVSASGKYPVLDM 126
                  DG+L +  G   V   
Sbjct: 121 DTGFKAADGALKNIKGGRLVNGD 143


>gi|228958033|ref|ZP_04119769.1| Flagellar hook protein FlgE [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228801658|gb|EEM48539.1| Flagellar hook protein FlgE [Bacillus thuringiensis serovar
           pakistani str. T13001]
          Length = 437

 Score = 90.3 bits (222), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 62/181 (34%), Gaps = 13/181 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49
           M  +    +    A +  LS  ++N++N  TVG++  K  F +++               
Sbjct: 1   MIKALYTSITGMNAAQNALSVTSNNIANAQTVGYKKQKAIFDDLLYNNTVGSRGDGAYAG 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF--ALESPRGIILTRDGRFK 107
            +     + V           GS   T  +++ A+EG+  F     +   +  TR G F 
Sbjct: 61  TNPKSIGNGVKFSGTSTDFSDGSITLTSDKMETAIEGNGLFLVGDRNSGNVEYTRKGSFG 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           V+ D  + + SG+Y +        Q        +       S  G +         ++ +
Sbjct: 121 VSKDNYVTNTSGQYVLGYGVKTGTQEIDFSSRPSPIHIPMGSAVGGIQTDKATIGGNLPR 180

Query: 168 G 168
            
Sbjct: 181 N 181



 Score = 70.3 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 18/144 (12%), Positives = 40/144 (27%), Gaps = 9/144 (6%)

Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
                   G  +S +         +    I     +      G +    KV+  + + + 
Sbjct: 298 SDLTNYPTGKTISTTEVTGRPAAIANDYSISDGGFVMMRYSDGSM----KVVGQLAVATF 353

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
             S G ++  N                        V+    E SN +   E   ++   +
Sbjct: 354 PNSGGLMKTGNGNYIATPSAGIPGIGVAGENGAGNVRGSAKESSNVDLSVEFVDLMLYQR 413

Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242
            F     +I  +++ + E +  I 
Sbjct: 414 GFQGNAKVIKVSDEVLNEVVNLIR 437


>gi|30019797|ref|NP_831428.1| flagellar hook protein FlgE [Bacillus cereus ATCC 14579]
 gi|229043508|ref|ZP_04191218.1| Flagellar hook protein FlgE [Bacillus cereus AH676]
 gi|229127079|ref|ZP_04256078.1| Flagellar hook protein FlgE [Bacillus cereus BDRD-Cer4]
 gi|229149956|ref|ZP_04278184.1| Flagellar hook protein FlgE [Bacillus cereus m1550]
 gi|296502353|ref|YP_003664053.1| flagellar hook protein FlgE [Bacillus thuringiensis BMB171]
 gi|29895342|gb|AAP08629.1| Flagellar hook protein flgE [Bacillus cereus ATCC 14579]
 gi|228633637|gb|EEK90238.1| Flagellar hook protein FlgE [Bacillus cereus m1550]
 gi|228656432|gb|EEL12271.1| Flagellar hook protein FlgE [Bacillus cereus BDRD-Cer4]
 gi|228725886|gb|EEL77133.1| Flagellar hook protein FlgE [Bacillus cereus AH676]
 gi|296323405|gb|ADH06333.1| flagellar hook protein FlgE [Bacillus thuringiensis BMB171]
          Length = 437

 Score = 90.3 bits (222), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 62/181 (34%), Gaps = 13/181 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49
           M  +    +    A +  LS  ++N++N  TVG++  K  F +++               
Sbjct: 1   MIKALYTSITGMNAAQNALSVTSNNIANAQTVGYKKQKAIFDDLLYNNTVGSRGDGAYAG 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF--ALESPRGIILTRDGRFK 107
            +     + V           GS   T  +++ A+EG+  F     +   +  TR G F 
Sbjct: 61  TNPKSIGNGVKFSGTSTDFSDGSITLTSDKMETAIEGNGLFLVGDRNSGNVEYTRKGSFG 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           V+ D  + + SG+Y +        Q        +       S  G +         ++ +
Sbjct: 121 VSKDNYVTNTSGQYVLGYGVKTGTQEIDFSSRPSPIHIPMGSAVGGIQTDKATIGGNLPR 180

Query: 168 G 168
            
Sbjct: 181 N 181



 Score = 69.9 bits (169), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 18/144 (12%), Positives = 40/144 (27%), Gaps = 9/144 (6%)

Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
                   G  +S +         +    I     +      G +    KV+  + + + 
Sbjct: 298 SGLTNYPTGKTISTTEVTGRPAAIANDYSISDGGFVMMRYSDGSM----KVVGQLAVATF 353

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
             S G ++  N                        V+    E SN +   E   ++   +
Sbjct: 354 PNSGGLMKTGNGNYIATPSAGIPGIGVAGENGAGNVRGSAKESSNVDLSVEFVDLMLYQR 413

Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242
            F     +I  +++ + E +  I 
Sbjct: 414 GFQGNAKVIKVSDEVLNEVVNLIR 437


>gi|213026919|ref|ZP_03341366.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Typhi str. 404ty]
          Length = 149

 Score = 90.3 bits (222), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 22/147 (14%), Positives = 49/147 (33%), Gaps = 6/147 (4%)

Query: 99  ILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIAT 157
             TRDG F+V  +G LV+A G      +      +         V    +       +  
Sbjct: 2   AYTRDGSFQVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQAAPVQVGQ 61

Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQ 212
           + L +     G      +            + +        + +G++E SN N   E+  
Sbjct: 62  LNLTTFMNDTGLESIGENLYIETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVN 121

Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIR 239
           MI + + +   +  +   ++ + +  +
Sbjct: 122 MIQVQRAYEINSKAVSTTDQMLQKLTQ 148


>gi|285018209|ref|YP_003375920.1| flagellar hook protein flge [Xanthomonas albilineans GPE PC73]
 gi|283473427|emb|CBA15932.1| probable flagellar hook protein flge [Xanthomonas albilineans]
          Length = 407

 Score = 90.3 bits (222), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 65/166 (39%), Gaps = 2/166 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVAS 61
            FN  L+   A    L+  A+N++N +T GF++ + +F++        +  +   S V  
Sbjct: 2   GFNTSLSGIKAANTDLNVTANNIANVNTTGFKSSRAEFADQFTVSGYGLARNAVGSGVRV 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
                    G+   TG  LD A+ G  +F L +    + +R G F+   +G +V+  G  
Sbjct: 62  SNVAQQFSQGNIDPTGRNLDLAISGSGFFTLSNNGARVYSRAGNFQTDANGYVVNPQGAR 121

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
             +   +          + ++  +   S          ++++  + 
Sbjct: 122 LQVFPPTANGNGFAVGTLSDLQLQTTDSPPNPTSTVNLMFTLPGNA 167



 Score = 75.3 bits (183), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 13/98 (13%), Positives = 33/98 (33%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLED 201
             +   K +  + + +    QG     ++  + +                 +V+ G LE 
Sbjct: 308 YSNNADKALGQVAMSNFVNPQGLTSLGDNAWAESSGSGAPRTGVAGSSDFGSVQSGALES 367

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           S  +   ++  MI   + F + + +I   ++     I 
Sbjct: 368 STVDLTEQLVNMIVAQRNFQANSQMISTQDQVTQTVIN 405


>gi|49480337|ref|YP_035873.1| flagellar hook protein FlgE [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|49331893|gb|AAT62539.1| flagellar hook protein [Bacillus thuringiensis serovar konkukian
           str. 97-27]
          Length = 437

 Score = 90.3 bits (222), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 61/181 (33%), Gaps = 13/181 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49
           M  +    +    A +  LS  ++N++N  TVG++  K  F +++               
Sbjct: 1   MIKALYTSITGMNAAQNALSVTSNNIANAQTVGYKKQKAIFDDLLYNNTVGSRGDGAYAG 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF--ALESPRGIILTRDGRFK 107
            +     + V           GS   T  +++ A+EG+  F     +   +  TR G F 
Sbjct: 61  TNPKSIGNGVKFSGTSTDFSDGSITLTSDKMETAIEGNGLFLVGDRNAGNVEYTRKGSFS 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           V+ D  + +  G+Y +        Q        +       S  G +         ++ +
Sbjct: 121 VSKDSYVTNTGGQYVLGYGVKTGTQEVDFSSRPSPIHIPMGSAVGGIQTDKATIGGNLPR 180

Query: 168 G 168
            
Sbjct: 181 N 181



 Score = 69.1 bits (167), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 18/144 (12%), Positives = 40/144 (27%), Gaps = 9/144 (6%)

Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
                   G  +S +         +    I     +      G +    KV+  + + + 
Sbjct: 298 SGLTNYPTGKTLSTTEVTGRPAAIANDYSISDGGFVMMKYSDGSM----KVVGQLAVATF 353

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
             S G ++  N                        V+    E SN +   E   ++   +
Sbjct: 354 PNSGGLMKTGNGNYVATPSAGIPGIGVAGENGAGNVRGSAKESSNVDLSVEFVDLMLYQR 413

Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242
            F     +I  +++ + E +  I 
Sbjct: 414 GFQGNAKVIKVSDEVLNEVVNLIR 437


>gi|3286760|emb|CAA05173.1| flagellar hook subunit protein [Campylobacter jejuni]
          Length = 862

 Score = 90.3 bits (222), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/183 (19%), Positives = 59/183 (32%), Gaps = 14/183 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G+    A +  +    +N+SN +T GF+  +  F  +                
Sbjct: 1   MMRSLWSGVRRLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATTPTDGRG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106
             +  Q    V+          GS  +T +  D A+ GD +F +         LTRDG F
Sbjct: 61  GQNPLQIGLGVSVSSTTRIHSQGSVQTTNSNTDVAINGDGFFMVSDDGGLTNYLTRDGAF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           K+   G+ V+ SG        +   Q                       +T      +++
Sbjct: 121 KLDAYGNFVNNSGFIVQGWNINWDDQTIDSSRSPQNIFIDPGMHIPAAKSTEVAIKANLN 180

Query: 167 QGF 169
            G 
Sbjct: 181 SGL 183



 Score = 73.0 bits (177), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 17/144 (11%), Positives = 46/144 (31%), Gaps = 5/144 (3%)

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           T      +    S  + +G+      +        + +          + K   +A + +
Sbjct: 716 TSGSNDGLVSSNSASTLTGQATDGYSSGNLKPDAIRVDEKGNLLGEFTNGKTFRVAKIAM 775

Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIH 215
            SV  + G      +          +      T     +K   LE SN +    + ++I 
Sbjct: 776 ASVANNSGLEEIGGNLFKVTANSGNIVVGEAGTGGRGEMKTSALEMSNVDLSRALTELII 835

Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239
           + + + + +  I  +++ +   I+
Sbjct: 836 IQRGYQANSKTISTSDQMLQTLIQ 859


>gi|229029434|ref|ZP_04185517.1| Flagellar hook protein flgE [Bacillus cereus AH1271]
 gi|228731893|gb|EEL82792.1| Flagellar hook protein flgE [Bacillus cereus AH1271]
          Length = 409

 Score = 90.3 bits (222), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 65/197 (32%), Gaps = 13/197 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49
           M  +    +    A +  LS  ++N++N  TVG++  K  F +++               
Sbjct: 1   MIKALYTSITGMNATQNALSVTSNNIANAQTVGYKKQKAMFDDLLYNNSIGSKGDNKYAG 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107
            +     + V           G+   TG +   A+EG+ +F     +   +  TR G F 
Sbjct: 61  TNPKSIGNGVKMSGTVTDYSDGTITLTGGKTQAAMEGNGFFVVGDSAGGNMEFTRKGTFG 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           ++ +  + +  G+Y     A+          I    +    +  G +  T G    ++  
Sbjct: 121 ISSNYYITNTEGQYVFAYPANAATGEVDLSGIPGPLQIPMGTAIGGIQTTKGTIKGNIPV 180

Query: 168 GFVRRENSGISPNIPPT 184
              +        +    
Sbjct: 181 NESKITQDLPFYDDAGN 197



 Score = 65.3 bits (157), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 12/93 (12%), Positives = 30/93 (32%), Gaps = 5/93 (5%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYE 209
              + +       G ++  N   +       L   +        V+ G  E +N +   E
Sbjct: 317 AGQLAVAMFPNEGGLMKTGNGNYTATNTTGILALGASGQNGAGKVRGGAQEGANVDLSVE 376

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
              ++   + F     +I  +++ + E +  I 
Sbjct: 377 FVDLMLYQRGFQGNAKVIKVSDEVLNEVVNLIR 409


>gi|187935288|ref|YP_001885050.1| flagellar hook protein FlgE [Clostridium botulinum B str. Eklund
           17B]
 gi|187723441|gb|ACD24662.1| flagellar hook protein FlgE [Clostridium botulinum B str. Eklund
           17B]
          Length = 364

 Score = 90.3 bits (222), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 59/161 (36%), Gaps = 37/161 (22%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G++   + + +L  + +N++N  T GF++   +F++++               
Sbjct: 1   MLRSMYSGISGMKSNQVKLDVIGNNIANVSTTGFKSSSARFTDMLYQNVSSATAPTSTKG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP------------- 95
             +  Q                G+ +STG  LD  ++GD +  + +              
Sbjct: 61  GTNAKQVGLGSQLASINKVMGQGNALSTGRSLDVCIDGDGYLIVGTGPASYGGDDGTKGG 120

Query: 96  ------------RGIILTRDGRFKVTDDGSLVSASGKYPVL 124
                         I+ TRDG   +  +G+L++A G   + 
Sbjct: 121 TSIVNGSINGGDMDILYTRDGNLTLDHEGNLLTADGYRVMG 161



 Score = 76.1 bits (185), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 13/96 (13%), Positives = 30/96 (31%), Gaps = 12/96 (12%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTP------------LEDLSGVTVKRGFLEDS 202
           +  + + S    +G      + +  +    P                      +G LE S
Sbjct: 265 LGQVAMGSFKNPEGLTSVGGNLLEASSNSGPVIVKTSTGTTDGDNSKGFGDFIQGALEAS 324

Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           N +   +   MI  T+ F + + +I   ++ +    
Sbjct: 325 NVDLTEQFTDMITATRAFQASSKMISTADEILQTIT 360


>gi|326319097|ref|YP_004236769.1| fagellar hook-basal body protein [Acidovorax avenae subsp. avenae
           ATCC 19860]
 gi|323375933|gb|ADX48202.1| fagellar hook-basal body protein [Acidovorax avenae subsp. avenae
           ATCC 19860]
          Length = 425

 Score = 90.3 bits (222), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 44/188 (23%), Positives = 71/188 (37%), Gaps = 6/188 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN--DIDQKISFVAS 61
           SF  GL+   A  + L  +  N++N+ TVGF+  + +F+E+V               V  
Sbjct: 2   SFQQGLSGLNAASKNLDVIGHNVANSGTVGFKASRAEFAEMVANAIGSAGGTNAGIGVEL 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLVSASGK 120
                    G+   TG  LD A+ GD +F L+ P G    TR G FK+  +G LV+ +  
Sbjct: 62  SAVAQQFNQGNISVTGNSLDVAINGDGFFTLQQPDGSRAYTRAGNFKLDSNGQLVTNTKA 121

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
             +         I  K    N       + K          + + +      + +G +  
Sbjct: 122 QVMGYALDP---ITGKRTASNAAPLSFPTSKPIPAKQTTAITAEFNLDARAPDAAGDATA 178

Query: 181 IPPTPLED 188
            PP P   
Sbjct: 179 TPPVPATP 186



 Score = 79.5 bits (194), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 14/89 (15%), Positives = 30/89 (33%), Gaps = 5/89 (5%)

Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEM 210
             + L S   +QG     ++                 +     ++ G LEDSN +   E+
Sbjct: 335 GQVALASFRNTQGLASVGSNNWVETFESGQPVLGTPTEGKFGGLRSGALEDSNVDLTAEL 394

Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             M+   + + +    I   ++ M   + 
Sbjct: 395 VNMMTAQRAYQANAQTIKTQDQVMSTLVN 423


>gi|251780251|ref|ZP_04823171.1| flagellar hook protein FlgE [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|243084566|gb|EES50456.1| flagellar hook protein FlgE [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 366

 Score = 90.3 bits (222), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 58/168 (34%), Gaps = 44/168 (26%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++     + +L  + +N++N  T GF++   +FS+++    ++         
Sbjct: 1   MLRSMYSGISGMKTNQVKLDVIGNNIANVSTTGFKSSSARFSDMLYQNASEATAPTSTKG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--------- 99
                Q                G+ +STG  LD  ++GD +  +     +          
Sbjct: 61  GTNAKQVGLGSQLSSINKVMGQGNALSTGRSLDVCVDGDGYIMVSKGPEVYAADKTGTGA 120

Query: 100 -----------------------LTRDGRFKVTDDGSLVSASGKYPVL 124
                                   TRDG F +  +G+L++A G   + 
Sbjct: 121 DAKNTIGISTSGKLTGGGENEILYTRDGNFTLDHEGNLLTADGYRVMG 168



 Score = 76.8 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 12/99 (12%), Positives = 30/99 (30%), Gaps = 15/99 (15%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPL---------------EDLSGVTVKRGFL 199
           +  + + +    +G      + +  +    P                         +G L
Sbjct: 264 LGQVAMATFKNPEGLTSIGGNLLQTSPNSGPEIIKTPVGKLATDFTDNSKGFGEFVQGAL 323

Query: 200 EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           E SN +   +   MI  T+ F + + +I   ++ +    
Sbjct: 324 ESSNVDLTEQFTDMITATRAFQASSKMITTGDEILQTIT 362


>gi|228952133|ref|ZP_04114228.1| Flagellar hook protein FlgE [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|228807665|gb|EEM54189.1| Flagellar hook protein FlgE [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
          Length = 437

 Score = 90.3 bits (222), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 62/181 (34%), Gaps = 13/181 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49
           M  +    +    A +  LS  ++N++N  TVG++  K  F +++               
Sbjct: 1   MIKALYTSITGMNAAQNALSVTSNNIANAQTVGYKKQKAIFDDLLYNNTVGSRGDGAYAG 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF--ALESPRGIILTRDGRFK 107
            +     + V           GS   T  +++ A+EG+  F     +   +  TR G F 
Sbjct: 61  TNPKSIGNGVKFSGTSTDFSDGSLTLTSDKMETAIEGNGLFLVGDRNSGNVEYTRKGSFG 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           V+ D  + + SG+Y +        Q        +       S  G +         ++ +
Sbjct: 121 VSKDNYVTNTSGQYVLGYGVKTGTQEIDFSSRPSPIHIPMGSAVGGIQTDKATIGGNLPR 180

Query: 168 G 168
            
Sbjct: 181 N 181



 Score = 70.3 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 18/144 (12%), Positives = 40/144 (27%), Gaps = 9/144 (6%)

Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
                   G  +S +         +    I     +      G +    KV+  + + + 
Sbjct: 298 SGLTNYPTGKTISTTEVTGRPAAIANDYSISDGGFVMMTYSDGSM----KVVGQLAVATF 353

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
             S G ++  N                        V+    E SN +   E   ++   +
Sbjct: 354 PNSGGLMKTGNGNYIATPSAGIPGIGVAGENGAGNVRGSAKESSNVDLSAEFVDLMLYQR 413

Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242
            F     +I  +++ + E +  I 
Sbjct: 414 GFQGNAKVIKVSDEVLNEVVNLIR 437


>gi|254973919|ref|ZP_05270391.1| flagellar hook protein [Clostridium difficile QCD-66c26]
 gi|255091306|ref|ZP_05320784.1| flagellar hook protein [Clostridium difficile CIP 107932]
 gi|255312963|ref|ZP_05354546.1| flagellar hook protein [Clostridium difficile QCD-76w55]
 gi|255515722|ref|ZP_05383398.1| flagellar hook protein [Clostridium difficile QCD-97b34]
 gi|255648816|ref|ZP_05395718.1| flagellar hook protein [Clostridium difficile QCD-37x79]
 gi|260682035|ref|YP_003213320.1| flagellar hook protein [Clostridium difficile CD196]
 gi|260685633|ref|YP_003216766.1| flagellar hook protein [Clostridium difficile R20291]
 gi|306518931|ref|ZP_07405278.1| flagellar hook protein [Clostridium difficile QCD-32g58]
 gi|260208198|emb|CBA60542.1| flagellar hook protein [Clostridium difficile CD196]
 gi|260211649|emb|CBE01907.1| flagellar hook protein [Clostridium difficile R20291]
          Length = 327

 Score = 90.3 bits (222), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 16/87 (18%), Positives = 35/87 (40%), Gaps = 1/87 (1%)

Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIP-PTPLEDLSGVTVKRGFLEDSNANSMYEMGQ 212
            I  +  Y+     G      +   P+     P    +   + +G +E SN +   E  +
Sbjct: 238 TIQKVQTYAFQNPAGLDAEGGNLFKPSANSGDPQIAGATGNIIQGAIEASNVDIAEEFTE 297

Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIR 239
           MI  ++ F + + +I  +++ + E I 
Sbjct: 298 MIIASRSFQANSKIISTSDEILQEIIN 324



 Score = 89.5 bits (220), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 24/150 (16%), Positives = 51/150 (34%), Gaps = 17/150 (11%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  +   G++   A + +L  + +N++N  T  F+    + ++                 
Sbjct: 1   MIKAMYSGVSGMKANQTKLDVIGNNVANAGTTSFKKSSARITDSFYQTVLYASAPTAALG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
             ++ Q                G+   T    D  ++GD +  +     ++ TRDG F +
Sbjct: 61  GTNLGQVGVGSKISSINKDMTQGNVQPTNRPSDLMIDGDGYLPVVRQGTVMYTRDGSFNL 120

Query: 109 T-----DDGSLVSASGKYPVLDMASVPIQI 133
                  DG+L +  G   V     +   +
Sbjct: 121 DTGFKAADGALKNIKGGRLVNGDGYMLQGV 150


>gi|89902477|ref|YP_524948.1| hypothetical protein Rfer_3717 [Rhodoferax ferrireducens T118]
 gi|89347214|gb|ABD71417.1| protein of unknown function DUF1078-like [Rhodoferax ferrireducens
           T118]
          Length = 404

 Score = 90.3 bits (222), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 3/126 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV--GAIKNDIDQKISFVAS 61
           SF  GL+   A  + L  + +N++N +T G ++ + +F ++V               VA 
Sbjct: 2   SFQTGLSGLNASSRSLDVIGNNIANANTTGMKSSRAEFGDLVASSLGAGGSSGAGIGVAV 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGK 120
           G        G+   TG +LD A+ G  +F L  P G    TRDG FK+  +G + + SG 
Sbjct: 62  GSISQQFSQGNINITGNDLDVAINGGGFFQLALPDGSAAYTRDGSFKLDANGYIKTNSGA 121

Query: 121 YPVLDM 126
             +   
Sbjct: 122 NVLGYP 127



 Score = 80.7 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 13/98 (13%), Positives = 32/98 (32%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGI-SPNIPPTP----LEDLSGVTVKRGFLED 201
             + + ++   + L      QG      +   +      P            ++ G LE+
Sbjct: 305 YSNGQTQIAGQLSLADFRNVQGLSPIGGNSWVASYTSGDPVLGSPGVGKFGALRSGALEE 364

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E+  M+   + + +    I   ++ M   + 
Sbjct: 365 SNVDLTAELVNMMTAQRAYQANAQTIKTQDQVMSTLVN 402


>gi|242278416|ref|YP_002990545.1| hypothetical protein Desal_0941 [Desulfovibrio salexigens DSM 2638]
 gi|242121310|gb|ACS79006.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           salexigens DSM 2638]
          Length = 513

 Score = 90.3 bits (222), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 64/191 (33%), Gaps = 5/191 (2%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA---IKNDIDQKISFV 59
           +S   G++         S V++N++N+ TVGF++    F +V  +       + Q  +  
Sbjct: 5   SSLYTGISGLYVNSFATSVVSNNLANSSTVGFKSSDAIFEDVFYSTLTTGGGLAQVGNGA 64

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR--GIILTRDGRFKVTDDGSLVSA 117
                      G++ ++    + A+ GD ++ +  P       TR G F    DG LV A
Sbjct: 65  GVSTINTDYSQGTYQNSSISTNVAINGDGYYMVVDPDTSTTYYTRAGNFDFDKDGFLVDA 124

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177
            G                   I     +       ++  TM L S  + +       + +
Sbjct: 125 YGNQVQGWEMENGSASGSLTTIQLDQSQSPPKATSEIALTMNLDSQSVDEAITANPYTSL 184

Query: 178 SPNIPPTPLED 188
                 T    
Sbjct: 185 FELYDGTQNPP 195



 Score = 69.5 bits (168), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 25/198 (12%), Positives = 58/198 (29%), Gaps = 7/198 (3%)

Query: 47  AIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106
           A  N          S    +S +  ++ ++G     A    A    + P     T +   
Sbjct: 315 ANLNFTGSAEGQNVSFNFGMSSDNATWDTSGGITSLADITAATDYSDLPSFSDYTLETGA 374

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
             +   S  S++      D       +  + +   +      + +   +  +GL S    
Sbjct: 375 TTSYSDS--SSATYDIAQDGYPTGSLVSVEVDENGILIGNYTNSQSIELFQLGLASFTNE 432

Query: 167 QGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221
            G      +                      +V    LE SN +   +M ++I +   + 
Sbjct: 433 SGLKAEGGTLFRATTDSGEAIIGTAGSSGFGSVVSNALEGSNVDLASQMTELIIIQSSYQ 492

Query: 222 SITTLIDENEKSMLEAIR 239
           + + ++   +  +  AI 
Sbjct: 493 ANSKVVTTADTLLQTAIS 510


>gi|294084418|ref|YP_003551176.1| hypothetical protein SAR116_0849 [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292663991|gb|ADE39092.1| hypothetical protein SAR116_0849 [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 1575

 Score = 89.9 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 73/195 (37%), Gaps = 5/195 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG--AIKNDIDQKISFVAS 61
           SF   L         +S  ++N++N  T GF+  +V+F ++     ++N      S    
Sbjct: 2   SFYTALTGLNGSSADISATSNNIANVGTTGFKRSRVEFGDIFATSPLQNSSSSLGSGAIL 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALES---PRGIILTRDGRFKVTDDGSLVSAS 118
                    G+  S+   LD A+ G  +FAL+        + TR+G   V +D  +V ++
Sbjct: 62  KGVKQQFTQGNIASSLNALDLAISGQGFFALKPSLTSAQTVYTRNGSLNVDNDRYVVDSA 121

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178
           G+Y +    +    +  KD    V  +  ++       +     V++        +    
Sbjct: 122 GQYLLTYPVNNDGSVTAKDLQSAVPLQLPVTSGDPQATSNINLGVNVPASSEVVTDQAQF 181

Query: 179 PNIPPTPLEDLSGVT 193
            +      +D S  T
Sbjct: 182 ADGYTFNPDDASTFT 196



 Score = 76.1 bits (185), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 12/123 (9%), Positives = 33/123 (26%), Gaps = 5/123 (4%)

Query: 122  PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
               D  +       + +          + +   +  + + + +   G  +  N+      
Sbjct: 1450 VQQDGFTSGRLDGLEIDSSGTIRANYTNGQNNPLGKIVVANFNNQNGLKQIGNATYVETA 1509

Query: 182  PPTPLEDLS-----GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                 +           +  G LE SN +   E+  +I   + + +    I+        
Sbjct: 1510 VSGTPQVGEAGAEGFGNILSGSLERSNVDITEELVNLITAQRNYQASAKAIETTTGLTQT 1569

Query: 237  AIR 239
             I 
Sbjct: 1570 IIN 1572


>gi|320325094|gb|EFW81163.1| flagellar hook protein FlgE [Pseudomonas syringae pv. glycinea str.
           B076]
          Length = 586

 Score = 89.9 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 56/133 (42%), Gaps = 3/133 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SFN  ++   A  +RL    +N++N+ T+GF++ + +FS +  A +    +         
Sbjct: 2   SFNTAISGIHAANKRLEVAGNNIANSGTIGFKSSRAQFSALYSASQLGSGRNAVGDGVRL 61

Query: 64  EYLSKEVGS---FISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
             + +         ++G  LD  ++G+ +F +     +  TR G F       +V + G 
Sbjct: 62  ASMQQNFNQGESMTTSGNPLDMRIQGNGFFVVSDGGSLAYTRAGAFLKDAANFVVDSEGG 121

Query: 121 YPVLDMASVPIQI 133
                 A+   +I
Sbjct: 122 RLQGYAANEQGEI 134



 Score = 66.0 bits (159), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 33/99 (33%), Gaps = 5/99 (5%)

Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLE 200
           G  +   K I  + L S    QG   R ++  + +      +       +  ++    LE
Sbjct: 486 GFANGMNKNIGQVILASFANPQGLQARSDTCWTESADSGVADYDVPGVGTLGSLIGDGLE 545

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            SN     E+  +I     + + +  I      M   I+
Sbjct: 546 GSNVVLADELIALIQAQTAYQANSKAISTEATVMQTLIQ 584


>gi|229069305|ref|ZP_04202595.1| Flagellar hook protein flgE [Bacillus cereus F65185]
 gi|229078936|ref|ZP_04211488.1| Flagellar hook protein flgE [Bacillus cereus Rock4-2]
 gi|228704350|gb|EEL56784.1| Flagellar hook protein flgE [Bacillus cereus Rock4-2]
 gi|228713792|gb|EEL65677.1| Flagellar hook protein flgE [Bacillus cereus F65185]
          Length = 407

 Score = 89.9 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 65/197 (32%), Gaps = 13/197 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49
           M  +    +    A +  LS  ++N++N  TVG++  K  F +++               
Sbjct: 1   MIKALYTSITGMNATQNALSVTSNNIANAQTVGYKKQKAMFDDLLYNNSIGAKGDGKYAG 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107
            +     + V           G+   TG +   A+EG+ +F         +  TR G F 
Sbjct: 61  TNPKSIGNGVKMSGTVTDYSDGTITLTGGKTQAAMEGNGFFVVGDSKGGNMEFTRKGTFG 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           ++ D  + +  G+Y     A+          I    +    +  G +  + G    ++  
Sbjct: 121 ISSDYYITNTEGQYVFAYPANEATGEVDLSGIPGPLQIPMGTAIGGIRTSKGTIKGNIPT 180

Query: 168 GFVRRENSGISPNIPPT 184
           G  +        +    
Sbjct: 181 GEKQITQDLPVYDNAGN 197



 Score = 65.7 bits (158), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 12/93 (12%), Positives = 29/93 (31%), Gaps = 5/93 (5%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYE 209
              + +       G ++  N   +       L            V+ G  E +N +   E
Sbjct: 315 AGQLAVAMFPNEGGLMKTGNGNYTATNTTGILALGTSGQNGAGKVRGGAQEGANVDLSVE 374

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
              ++   + F     +I  +++ + E +  I 
Sbjct: 375 FVDLMLYQRGFQGNAKVIKVSDEVLNEVVNLIR 407


>gi|70731823|ref|YP_261565.1| flagellar hook protein FlgE [Pseudomonas fluorescens Pf-5]
 gi|68346122|gb|AAY93728.1| flagellar hook protein FlgE [Pseudomonas fluorescens Pf-5]
          Length = 447

 Score = 89.9 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 33/118 (27%), Positives = 57/118 (48%), Gaps = 2/118 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--ISFVAS 61
           SFNIGL+   A  ++L    +N++N  T GF++ + +F++V  A K     +   + V  
Sbjct: 2   SFNIGLSGLYAANKQLDVTGNNIANVATTGFKSSRAEFADVYSATKLGSGTQVIGNGVRL 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119
                    G   +TG  LD  ++G  +F L +   +  TR G FK   +G + ++ G
Sbjct: 62  ANVSQQFTNGDINNTGNVLDMGIQGQGFFVLSTNGSLTYTRAGTFKTDKEGYITNSDG 119



 Score = 67.6 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 31/98 (31%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLED 201
             +++ K I  + L S    QG      +                +  +   ++   LE+
Sbjct: 348 FSNEQTKPIGQISLASFTNEQGLQPVGGTQWKETYSSGIPGYDAPKTGTLGAIQSNSLEE 407

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN N   E+  +I     + +    I      M   I+
Sbjct: 408 SNVNLTNELVNLIKAQSNYQANAKTISTQSTIMQTIIQ 445


>gi|291528559|emb|CBK94145.1| fagellar hook-basal body proteins [Eubacterium rectale M104/1]
          Length = 247

 Score = 89.9 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 49/209 (23%), Positives = 89/209 (42%), Gaps = 14/209 (6%)

Query: 46  GAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-----PRGIIL 100
             +  ++      V  G+ Y   + GSF  T    D A+ G  +FA+          +  
Sbjct: 39  YGLHKNLGSMTYGVHLGETYTDWDEGSFKVTDNPTDLAIGGKGFFAVAFTDKSGQTSVKY 98

Query: 101 TRDGRFKVTDDGSLVSASGKYP-------VLDMASVPIQIPQKDEIFNVGEKGEISQKGK 153
           TRDG FKV  DG LV+A G +          D           +E F+V   G I+Q  +
Sbjct: 99  TRDGAFKVNADGYLVTADGDHVLNATGALSGDGGEANWVKVDPNEKFSVNSLGYITQNNQ 158

Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQM 213
           ++ T+G+  VD      +   +  +       +   +   +++G LE SN N + EM  M
Sbjct: 159 LVGTIGVVDVDNYDYIEKYGENLYNLTAGGNIIASDAE--IEQGALETSNVNVVNEMVNM 216

Query: 214 IHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           I + + + +   +I   ++++ +A+ N+ 
Sbjct: 217 ITIQRAYEAGQKVITSIDETLDKAVNNVG 245


>gi|257484948|ref|ZP_05638989.1| flagellar basal-body protein, putative [Pseudomonas syringae pv.
           tabaci ATCC 11528]
 gi|331011043|gb|EGH91099.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 586

 Score = 89.9 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 56/133 (42%), Gaps = 3/133 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SFN  ++   A  +RL    +N++N+ T+GF++ + +FS +  A +    +         
Sbjct: 2   SFNTAISGIHAANKRLEVAGNNIANSGTIGFKSSRAQFSALYSASQLGSGRNAVGDGVRL 61

Query: 64  EYLSKEVGS---FISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
             + +         ++G  LD  ++G+ +F +     +  TR G F       +V + G 
Sbjct: 62  ASMQQNFNQGESMTTSGNPLDMRIQGNGFFVVSDGGSLAYTRAGAFLKDAANFVVDSEGG 121

Query: 121 YPVLDMASVPIQI 133
                 A+   +I
Sbjct: 122 RLQGYAANEQGEI 134



 Score = 66.0 bits (159), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 33/99 (33%), Gaps = 5/99 (5%)

Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLE 200
           G  +   K I  + L S    QG   R ++  + +      +       +  ++    LE
Sbjct: 486 GFTNGMNKNIGQVILASFANPQGLQARSDTRWTESADSGVADYDVPGVGTLGSLIGDGLE 545

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            SN     E+  +I     + + +  I      M   I+
Sbjct: 546 GSNVVLADELIALIQAQTAYQANSKAISTEATVMQTLIQ 584


>gi|218235227|ref|YP_002366439.1| flagellar hook protein FlgE [Bacillus cereus B4264]
 gi|228907387|ref|ZP_04071245.1| Flagellar hook protein flgE [Bacillus thuringiensis IBL 200]
 gi|228938867|ref|ZP_04101467.1| Flagellar hook protein flgE [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228964737|ref|ZP_04125844.1| Flagellar hook protein flgE [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228971748|ref|ZP_04132369.1| Flagellar hook protein flgE [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228978357|ref|ZP_04138734.1| Flagellar hook protein flgE [Bacillus thuringiensis Bt407]
 gi|218163184|gb|ACK63176.1| flagellar hook protein [Bacillus cereus B4264]
 gi|228781374|gb|EEM29575.1| Flagellar hook protein flgE [Bacillus thuringiensis Bt407]
 gi|228787838|gb|EEM35796.1| Flagellar hook protein flgE [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228794987|gb|EEM42486.1| Flagellar hook protein flgE [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228820716|gb|EEM66741.1| Flagellar hook protein flgE [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228852248|gb|EEM97044.1| Flagellar hook protein flgE [Bacillus thuringiensis IBL 200]
 gi|326939367|gb|AEA15263.1| flagellar hook protein FlgE [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 407

 Score = 89.9 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 65/197 (32%), Gaps = 13/197 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49
           M  +    +    A +  LS  ++N++N  TVG++  K  F +++               
Sbjct: 1   MIKALYTSITGMNATQNALSVTSNNIANAQTVGYKKQKAMFDDLLYNNSIGAKGDGKYAG 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107
            +     + V           G+   TG +   A+EG+ +F         +  TR G F 
Sbjct: 61  TNPKSIGNGVKMSGTVTDYSDGTITLTGGKTQAAMEGNGFFVVGDSKGGNMEFTRKGTFG 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           ++ D  + +  G+Y     A+          I    +    +  G +  + G    ++  
Sbjct: 121 ISSDYYITNTEGQYVFAYPANEATGEVDLSGIPGPLQIPMGTAIGGIRTSKGTIKGNIPT 180

Query: 168 GFVRRENSGISPNIPPT 184
           G  +        +    
Sbjct: 181 GEKQITQDLPVYDNAGN 197



 Score = 65.7 bits (158), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 12/93 (12%), Positives = 30/93 (32%), Gaps = 5/93 (5%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYE 209
              + +       G ++  N   +       L   +        V+ G  E +N +   E
Sbjct: 315 AGQLAVAMFPNEGGLMKTGNGNYTATNTTGILALGASGQNGAGKVRGGAQEGANVDLSVE 374

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
              ++   + F     +I  +++ + E +  I 
Sbjct: 375 FVDLMLYQRGFQGNAKVIKVSDEVLNEVVNLIR 407


>gi|206970889|ref|ZP_03231841.1| flagellar hook protein FlgE [Bacillus cereus AH1134]
 gi|228920464|ref|ZP_04083809.1| Flagellar hook protein flgE [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|229178162|ref|ZP_04305533.1| Flagellar hook protein flgE [Bacillus cereus 172560W]
 gi|206734525|gb|EDZ51695.1| flagellar hook protein FlgE [Bacillus cereus AH1134]
 gi|228605292|gb|EEK62742.1| Flagellar hook protein flgE [Bacillus cereus 172560W]
 gi|228839094|gb|EEM84390.1| Flagellar hook protein flgE [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 407

 Score = 89.9 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 65/197 (32%), Gaps = 13/197 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49
           M  +    +    A +  LS  ++N++N  TVG++  K  F +++               
Sbjct: 1   MIKALYTSITGMNATQNALSVTSNNIANAQTVGYKKQKAMFDDLLYNNSIGAKGDGKYAG 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107
            +     + V           G+   TG +   A+EG+ +F         +  TR G F 
Sbjct: 61  TNPKSIGNGVKMSGTVTDYSDGTITLTGGKTQAAMEGNGFFVVGDSKGGNMEFTRKGTFG 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           ++ D  + +  G+Y     A+          I    +    +  G +  + G    ++  
Sbjct: 121 ISSDYYITNTEGQYVFAYPANEATGEVDLSGIPGPLQIPMGTAIGGIRTSKGTIKGNIPT 180

Query: 168 GFVRRENSGISPNIPPT 184
           G  +        +    
Sbjct: 181 GEKQITQDLPVYDNAGN 197



 Score = 65.3 bits (157), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 12/93 (12%), Positives = 29/93 (31%), Gaps = 5/93 (5%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYE 209
              + +       G ++  N   +       L            V+ G  E +N +   E
Sbjct: 315 AGQLAVAMFPNEGGLMKTGNGNYTATNTTGILALGTSGQNGAGKVRGGAQEGANVDLSVE 374

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
              ++   + F     +I  +++ + E +  I 
Sbjct: 375 FVDLMLYQRGFQGNAKVIKVSDEVLNEVVNLIR 407


>gi|167034944|ref|YP_001670175.1| flagellar hook protein FlgE [Pseudomonas putida GB-1]
 gi|166861432|gb|ABY99839.1| flagellar basal body FlaE domain protein [Pseudomonas putida GB-1]
          Length = 440

 Score = 89.9 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/136 (26%), Positives = 60/136 (44%), Gaps = 4/136 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI----DQKISFV 59
           SFNIGL+   A  + L+   +N++N  T GF++ + +F++             +   + V
Sbjct: 2   SFNIGLSGLYAANKALNVTGNNIANVATTGFKSSRAEFADQYSNSIRGTSAGKNTVGTGV 61

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119
            +         G+   TG  LD A++G+ +F +      I TR G F    DG +V+ASG
Sbjct: 62  KTAAVSQLFTPGNINGTGQALDMAIDGNGFFVMSDNGSKIYTRAGAFYSDKDGYVVNASG 121

Query: 120 KYPVLDMASVPIQIPQ 135
                       +I Q
Sbjct: 122 SKLQGYAVDANGKITQ 137



 Score = 66.0 bits (159), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 16/103 (15%), Positives = 32/103 (31%), Gaps = 5/103 (4%)

Query: 142 VGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKR 196
                  + + KVI  + + +    QG      +    +           +  +   +  
Sbjct: 336 NMFANFTNGQDKVIGQVAIANFANLQGLTPIGGTNWKESYASGVPVIGAPDTGTLGQITG 395

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G LEDSN +   E+  +I     + +    I      M   I+
Sbjct: 396 GALEDSNVDLTGELVNLIKAQSNYQANAKTISTESTIMQTIIQ 438


>gi|182418417|ref|ZP_02949711.1| flagellar basal-body rod protein FlgG [Clostridium butyricum 5521]
 gi|237666503|ref|ZP_04526488.1| flagellar basal-body rod protein FlgG (Distal rod protein)
           [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|182377799|gb|EDT75343.1| flagellar basal-body rod protein FlgG [Clostridium butyricum 5521]
 gi|237657702|gb|EEP55257.1| flagellar basal-body rod protein FlgG [Clostridium butyricum E4
           str. BoNT E BL5262]
          Length = 379

 Score = 89.9 bits (221), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 61/166 (36%), Gaps = 34/166 (20%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50
           M      G++     +Q+L  + +N++N  T  F++ + +FS+++               
Sbjct: 1   MLRCMYSGISGMKVNQQKLDVIGNNIANVGTTAFKSSRAEFSDMLYQNAGVATSPTSNKG 60

Query: 51  --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL---------------- 92
             +  Q                G+ +STG  LD  ++G+ +F +                
Sbjct: 61  GTNAKQVGLGAKLASIDRVMSQGNALSTGRTLDACVDGEGYFIVGNGLVDYTGAGTTVTK 120

Query: 93  ------ESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQ 132
                  +   I  TRDG F++  +G+LV++ G   +    +    
Sbjct: 121 DGKLIGGNGMAINYTRDGNFQLDYEGNLVTSDGYRIMGYPLTATQP 166



 Score = 69.1 bits (167), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 11/63 (17%), Positives = 22/63 (34%)

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
                   T         + +G LE SN +   +   MI  T+ F + + +I   ++ + 
Sbjct: 313 ADGTADTTTFDNSKGFGDIIQGCLEASNVDLTEQFTDMITATRSFQASSKMITTGDEILQ 372

Query: 236 EAI 238
              
Sbjct: 373 TIT 375


>gi|330986469|gb|EGH84572.1| flagellar hook protein FlgE [Pseudomonas syringae pv. lachrymans
           str. M301315]
          Length = 586

 Score = 89.9 bits (221), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 56/133 (42%), Gaps = 3/133 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SFN  ++   A  +RL    +N++N+ T+GF++ + +FS +  A +    +         
Sbjct: 2   SFNTAISGIHAANKRLEVAGNNIANSGTIGFKSSRAQFSALYSASQLGSGRNAVGDGVRL 61

Query: 64  EYLSKEVGS---FISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
             + +         ++G  LD  ++G+ +F +     +  TR G F       +V + G 
Sbjct: 62  ASMQQNFNQGESMTTSGNPLDMRIQGNGFFVVSDGGSLAYTRAGAFLKDAANFVVDSEGG 121

Query: 121 YPVLDMASVPIQI 133
                 A+   +I
Sbjct: 122 RLQGYAANAQGEI 134



 Score = 66.0 bits (159), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 33/99 (33%), Gaps = 5/99 (5%)

Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLE 200
           G  +   K I  + L S    QG   R ++  + +      +       +  ++    LE
Sbjct: 486 GFTNGMNKNIGQVILASFANPQGLQARSDTRWTESADSGVADYDVPGVGTLGSLIGDGLE 545

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            SN     E+  +I     + + +  I      M   I+
Sbjct: 546 GSNVVLADELIALIQAQTAYQANSKAISTEATVMQTLIQ 584


>gi|87119676|ref|ZP_01075573.1| hypothetical protein MED121_07045 [Marinomonas sp. MED121]
 gi|86165152|gb|EAQ66420.1| hypothetical protein MED121_07045 [Marinomonas sp. MED121]
          Length = 565

 Score = 89.9 bits (221), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 38/166 (22%), Positives = 63/166 (37%), Gaps = 3/166 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI---KNDIDQKISFVA 60
            FN  L+   A    LS   DN++N+DT GF+  +++F ++           +   S V+
Sbjct: 2   GFNTALSGIKASADALSVTGDNIANSDTTGFKQSRIEFGDLYNTSVVGAGSNNTIGSGVS 61

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
                 +   G+   T   LD A++G  +F L        TR G FK+  DG LV+  G 
Sbjct: 62  VNNIAQAFSAGNIAYTDNNLDLAVDGTGFFVLNLGGTQAYTRAGDFKLDADGFLVTNDGA 121

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
                 A   I     + +    ++        +   + L S    
Sbjct: 122 NVEGYNAVDGIVGGNLENLQVPTDRIAPQATSDIQLQINLDSESND 167



 Score = 74.1 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/225 (12%), Positives = 72/225 (32%), Gaps = 16/225 (7%)

Query: 31  TVGF---RTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGD 87
           T+G+   +  +    E+V  +    + +         Y+  +V     T   +    +G 
Sbjct: 339 TLGYYFIKQGENNTFEMVVTVDGKTEYEDPITGEMTSYIPDDVVVTFDTAGNISSVAQGF 398

Query: 88  AWFALESPRGIILT------RDGRFKVTDDG--SLVSASGKYPVLDMASVPIQIPQKDEI 139
             FA+  P  + +       R+    +  +G      +S    + D  +         + 
Sbjct: 399 PPFAVTQPITLEIKGFDPTNREAVIPIDMNGSTQFALSSSDVFMQDGFTAGELQGVMFDE 458

Query: 140 FNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP-----LEDLSGVTV 194
                    +Q+  V+  + L + D + G     ++    +              +  +V
Sbjct: 459 DGFLIATYTNQQTSVLGQIALATFDNTDGLTPSGDTSWVASSDSGQANVGKPNTGTLGSV 518

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +   LE+SN +   E+  +I   + + + +  ++         I 
Sbjct: 519 QGAALEESNVDLTSELVALIEAQRNYQANSKTLETENTVTQTIIN 563


>gi|47566136|ref|ZP_00237174.1| flagellar hook protein flgE, putative [Bacillus cereus G9241]
 gi|47557053|gb|EAL15383.1| flagellar hook protein flgE, putative [Bacillus cereus G9241]
          Length = 409

 Score = 89.9 bits (221), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 64/197 (32%), Gaps = 13/197 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49
           M  +    +    A +  LS  ++N++N  TVG++  K  F +++               
Sbjct: 1   MIKALYTSITGMNATQNALSVTSNNIANAQTVGYKKQKAMFDDLLYNNSIGAKGDGNYAG 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107
            +     + V           G+   TG +   A+EG+ +F         +  TR G F 
Sbjct: 61  TNPKSIGNGVKMSGTVTDYSDGTITLTGGKTQAAMEGNGFFVVGDSKGGNMEFTRKGTFG 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           ++ D  + +  G+Y     A+          I    +    +  G +  T G    ++  
Sbjct: 121 ISSDYYITNTEGQYVFAYPANEATGEVDLSGIPGPLQIPMGTAIGGIQTTKGTIKGNIPV 180

Query: 168 GFVRRENSGISPNIPPT 184
              +        +    
Sbjct: 181 NESKITQDLPFYDDAGN 197



 Score = 65.3 bits (157), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 11/93 (11%), Positives = 30/93 (32%), Gaps = 5/93 (5%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYE 209
              + +       G ++  N   +       L   +        ++ G  E +N +   E
Sbjct: 317 AGQLAVAMFPNEGGLMKTGNGNYTATNTTGILALGASGQNGAGKIRGGAQEGANVDLSVE 376

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
              ++   + F     +I  +++ + E +  I 
Sbjct: 377 FVDLMLYQRGFQGNAKVIKVSDEVLNEVVNLIR 409


>gi|212634348|ref|YP_002310873.1| flagellar hook protein FlgE [Shewanella piezotolerans WP3]
 gi|212555832|gb|ACJ28286.1| Flagellar basal body rod protein FlaE [Shewanella piezotolerans
           WP3]
          Length = 453

 Score = 89.9 bits (221), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 38/184 (20%), Positives = 72/184 (39%), Gaps = 5/184 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61
           SFNI L+   + ++ L+T A+N++N +T GF+  + +F++V  +    N        VA+
Sbjct: 2   SFNIALSGISSAQKDLNTTANNIANVNTTGFKESRAEFADVYASSIFANSKTTVGGGVAT 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESP---RGIILTRDGRFKVTDDGSLVSAS 118
            +       GS   T   LD A+ G  +F   S    +    TR G FK   +  +V ++
Sbjct: 62  SQVAQQFHQGSLQFTNNSLDMAINGGGFFVTSSEIGSQDHSFTRAGAFKFDSNNYMVDSA 121

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178
           G +                       +   +    V        ++++ G    + +   
Sbjct: 122 GNFLQTFPVDKDGNSTSVSLTTTEPVQIPDTAGSPVKTDNIGMQMNLNAGDKTFDPANFD 181

Query: 179 PNIP 182
           P+ P
Sbjct: 182 PDDP 185



 Score = 67.6 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 34/91 (37%), Gaps = 5/91 (5%)

Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMY 208
            +A + L      QG  +  N+    ++   P         +  +++   LE SN +   
Sbjct: 361 PLARVALVRFANEQGLSQAGNTSWKASLDSGPALAGEANSGTFGSIRSSALEQSNVDLTT 420

Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           E+  +I   + F + +  ++ N       ++
Sbjct: 421 ELVDLISAQRNFQANSRTLEVNNTLQQTVLQ 451


>gi|218896686|ref|YP_002445097.1| flagellar hook protein [Bacillus cereus G9842]
 gi|228900335|ref|ZP_04064565.1| Flagellar hook protein flgE [Bacillus thuringiensis IBL 4222]
 gi|218545583|gb|ACK97977.1| flagellar hook protein [Bacillus cereus G9842]
 gi|228859370|gb|EEN03800.1| Flagellar hook protein flgE [Bacillus thuringiensis IBL 4222]
          Length = 407

 Score = 89.9 bits (221), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 65/197 (32%), Gaps = 13/197 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49
           M  +    +    A +  LS  ++N++N  TVG++  K  F +++               
Sbjct: 1   MIKALYTSITGMNATQNALSVTSNNIANAQTVGYKKQKAMFDDLLYNNSIGAKGDGKYAG 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107
            +     + V           G+   TG +   A+EG+ +F         +  TR G F 
Sbjct: 61  TNPKSIGNGVKMSGTVTDYSDGTITLTGGKTQAAMEGNGFFVVGDSKGGNMEFTRKGTFG 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           ++ D  + +  G+Y     A+          I    +    +  G +  + G    ++  
Sbjct: 121 ISSDYYITNTEGQYVFAYPANEATGEVDLSGIPGPLQIPMGTAIGGIRTSKGTIKGNIPT 180

Query: 168 GFVRRENSGISPNIPPT 184
           G  +        +    
Sbjct: 181 GEKQITQDLPVYDNAGN 197



 Score = 65.3 bits (157), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 12/93 (12%), Positives = 30/93 (32%), Gaps = 5/93 (5%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYE 209
              + +       G ++  N   +       L   +        V+ G  E +N +   E
Sbjct: 315 AGQLAVAMFPNEGGLMKTGNGNYTATNTTGILALGASGQNGAGKVRGGAQEGANVDLSVE 374

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
              ++   + F     +I  +++ + E +  I 
Sbjct: 375 FVDLMLYQRGFQGNAKVIKVSDEVLNEVVNLIR 407


>gi|146293690|ref|YP_001184114.1| flagellar hook protein FlgE [Shewanella putrefaciens CN-32]
 gi|145565380|gb|ABP76315.1| flagellar basal body FlaE domain protein [Shewanella putrefaciens
           CN-32]
 gi|319427089|gb|ADV55163.1| flagellar hook-basal body protein [Shewanella putrefaciens 200]
          Length = 453

 Score = 89.9 bits (221), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 5/125 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61
           SFNI L+   A ++ L+T A+N++N +T+GF+  + +F++V       N        VA+
Sbjct: 2   SFNIALSGISAAQKDLNTTANNIANANTIGFKESRAEFADVYANSIFSNSKTAVGGGVAT 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII---LTRDGRFKVTDDGSLVSAS 118
            +       GS   T   LD A++G  +F   S  G +    TR G FKV     +V +S
Sbjct: 62  SQVAQQFHQGSLQLTNNSLDLAIKGGGFFVTSSELGTLDFSYTRAGAFKVDASNYMVDSS 121

Query: 119 GKYPV 123
           G Y  
Sbjct: 122 GNYLQ 126



 Score = 65.3 bits (157), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 33/91 (36%), Gaps = 5/91 (5%)

Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMY 208
            +A + L      QG  +  N+    ++   P         +  ++    LE SN +   
Sbjct: 361 PLARVALVRFANEQGLTQVGNTSWKASLNSGPALAGEANSGTFGSLSSSALEQSNIDLTT 420

Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           E+  +I   + F + +  ++ N       ++
Sbjct: 421 ELVDLISAQRNFQANSRTLEVNNTLQQTVLQ 451


>gi|23092315|gb|AAN08640.1| FlgE [Aeromonas hydrophila]
          Length = 453

 Score = 89.9 bits (221), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 69/191 (36%), Gaps = 5/191 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK--NDIDQKISFVAS 61
           SFN  L+   A ++ L+  A+N++N +++GF+  + +F++V       N   Q  + VA+
Sbjct: 2   SFNNALSGVNAAQKDLNVTANNIANVNSIGFKESRAEFADVYANSIFVNAKTQVGNGVAT 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI---ILTRDGRFKVTDDGSLVSAS 118
           G        G+   T   LD A++G+ +F             TR G FK+ ++  +V+  
Sbjct: 62  GAVAQQFHQGALQFTNNSLDLAIQGNGFFVTSDGLTNLDRTYTRAGAFKLDENSYMVNNQ 121

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178
           G Y      +V               +           +    S +             +
Sbjct: 122 GHYLQGYEVNVDGTPKAVSINATKPIQIPDKAGVPTKTSTIEASFNFPSDAKPLAAGNTA 181

Query: 179 PNIPPTPLEDL 189
            +       + 
Sbjct: 182 TDASIFDPTND 192



 Score = 64.9 bits (156), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 15/125 (12%), Positives = 41/125 (32%), Gaps = 5/125 (4%)

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                D ++V      +     +      +     +A + +     SQG  +  ++    
Sbjct: 327 NKLTQDGSTVGRLTKVEITADGIVSATYSNATTLKVAMVAMAKFANSQGLTQVGDTSWRQ 386

Query: 180 N-----IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
           +       P      +  ++K   LE SN +   ++  +I   + F + +  ++ N    
Sbjct: 387 SLLSGDALPGTPNSGTFGSIKSSSLEQSNVDLTSQLVNLITAQRNFQANSRSLEVNSSLQ 446

Query: 235 LEAIR 239
              ++
Sbjct: 447 QTILQ 451


>gi|332187911|ref|ZP_08389644.1| flagellar hook-basal body s family protein [Sphingomonas sp. S17]
 gi|332012072|gb|EGI54144.1| flagellar hook-basal body s family protein [Sphingomonas sp. S17]
          Length = 430

 Score = 89.9 bits (221), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 68/186 (36%), Gaps = 5/186 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61
           SF   L+   A +  +S ++ N++N  T GF+  + +F++V+ A    +   Q  S    
Sbjct: 2   SFYTSLSGLQASQTDMSVISHNLANVGTNGFKKSRAEFADVMAANFSTDPFKQVGSGTVV 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI---ILTRDGRFKVTDDGSLVSAS 118
                  + G++ ST   LD A+ GD +F +++         TR+G F+V  +  +    
Sbjct: 62  KANRQEFKEGNYTSTSNALDLAISGDGFFTVQAGGTTGTLNYTRNGSFQVDTNNYVTDTQ 121

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178
           G    +        +           +   +    V        +++S        +   
Sbjct: 122 GNRLQVFPVDKDGNVTSFGNDGLTSLQLPPTSGTPVATKKVTLDINLSSTATAPTGAFDR 181

Query: 179 PNIPPT 184
            N+   
Sbjct: 182 TNMGTY 187



 Score = 67.2 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 14/94 (14%), Positives = 34/94 (36%), Gaps = 6/94 (6%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYE 209
           +  + + +     G  +  NS                 + +   ++   +E SN +   E
Sbjct: 338 LGKVAVATFVNMPGLRQEGNSYWEATGMSGAAKFGTANEGAYGAIRSSTIEGSNVDITEE 397

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           +  +I   + F +    +D + + + + I NI S
Sbjct: 398 LVNLIAAQRNFQANAKALDTSSQ-ISQTIFNIRS 430


>gi|163939559|ref|YP_001644443.1| flagellar hook protein FlgE [Bacillus weihenstephanensis KBAB4]
 gi|163861756|gb|ABY42815.1| protein of unknown function DUF1078 domain protein [Bacillus
           weihenstephanensis KBAB4]
          Length = 407

 Score = 89.9 bits (221), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 65/197 (32%), Gaps = 13/197 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49
           M  +    +    A +  LS  ++N++N  TVG++  K  F +++               
Sbjct: 1   MIKALYTSITGMNATQNALSVTSNNIANAQTVGYKKQKAMFDDLLYNNSIGAKGDGKYAG 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107
            +     + V           G+   TG +   A+EG+ +F         +  TR G F 
Sbjct: 61  TNPKSIGNGVKMSGTVTDYSDGTITLTGGKTQAAMEGNGFFVVGDSKGGNMEFTRKGTFG 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           ++ D  + +  G+Y     A+          I    +    +  G +  + G    ++  
Sbjct: 121 ISSDYYITNTEGQYVFAYPANEATGEVDLSGIPGPLQIPMGTAIGGIRTSQGTIKGNIPT 180

Query: 168 GFVRRENSGISPNIPPT 184
           G  +        +    
Sbjct: 181 GEKQITQDLPVYDNAGN 197



 Score = 64.9 bits (156), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 11/93 (11%), Positives = 30/93 (32%), Gaps = 5/93 (5%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYE 209
              + +       G ++  N   +       L   +        ++ G  E +N +   E
Sbjct: 315 AGQLAVAMFPNEGGLMKTGNGNYTATNTTGILALGASGQNGAGKIRGGAQEGANVDLSVE 374

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
              ++   + F     +I  +++ + E +  I 
Sbjct: 375 FVDLMLYQRGFQGNAKVIKISDEVLNEVVNLIR 407


>gi|298530010|ref|ZP_07017412.1| fagellar hook-basal body protein [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298509384|gb|EFI33288.1| fagellar hook-basal body protein [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 755

 Score = 89.9 bits (221), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 34/149 (22%), Positives = 58/149 (38%), Gaps = 5/149 (3%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---DIDQKISFV 59
           +S   G++      +++ T+ +N+SN  TVGF+  ++ F + +    N    + Q    V
Sbjct: 5   SSMYTGVSGLKGHGEKMGTIGNNISNVSTVGFKGSRMHFEDFMSQDINTGAGVGQVGRGV 64

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFAL--ESPRGIILTRDGRFKVTDDGSLVSA 117
             G        GS  ST    D A+ GD +F +        + TR G F+  ++G LV  
Sbjct: 65  GVGAVMNDFSQGSLESTNEATDVAIGGDGFFQVSARGTDENLYTRAGNFRFDEEGYLVDP 124

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKG 146
           +                  D+     E G
Sbjct: 125 NNNVVQGWEVREDPPGVADDDEIIQTETG 153



 Score = 69.9 bits (169), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/209 (12%), Positives = 51/209 (24%), Gaps = 7/209 (3%)

Query: 32  VGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA 91
            G+      F  + G      +   +   +             S  +  +    G+  F 
Sbjct: 542 NGYPVFTPNFLGIEGQNFTGAEGAQNIEMNFGLRNQTGNWEAGSAESPAELTEFGNTDFN 601

Query: 92  LESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQK 151
            ++      TR      T   S  +   +            I         G        
Sbjct: 602 FDNIAEFEETRREAQASTQYSSSSTTLMQNQDGYTTGFLQNIEIDRNGVLTGRYDNGQVM 661

Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANS 206
              +  + L      QG  +   +  S      P       T     +    LE SN + 
Sbjct: 662 D--LYALTLADFHNEQGLRKEGGNLFSETRSSGPAMTGLAGTRGLGEISSNSLEMSNVDL 719

Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSML 235
             E  ++I   + F + +  I   +  + 
Sbjct: 720 ATEFVKLIQTEKGFQANSKTIQTTDTMLG 748


>gi|294339843|emb|CAZ88206.1| putative Flagellar basal body FlaE (FlgE) [Thiomonas sp. 3As]
          Length = 415

 Score = 89.5 bits (220), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 54/129 (41%), Gaps = 4/129 (3%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA----IKNDIDQKIS 57
            ++F   L+   A    L  + +N++N +TVGF++   +F++   A          Q   
Sbjct: 1   MSTFQTALSGLQAASTDLQVMGNNIANANTVGFKSSNAQFADTYAAAIAGTSPQYGQVGI 60

Query: 58  FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSA 117
             +          G+  ST   LD A+ G  +F        +  R+G+F++  +G +V A
Sbjct: 61  GTSVATVAQQFSQGNIESTSNPLDVAINGSGFFQFNYNGATVYGRNGQFQLDQNGYIVDA 120

Query: 118 SGKYPVLDM 126
           +G   +   
Sbjct: 121 AGGQLIGTP 129



 Score = 41.4 bits (95), Expect = 0.12,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 58/194 (29%), Gaps = 11/194 (5%)

Query: 51  DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTD 110
           D       + SG     +   +   +GT    A  G  W    SP  I L   G      
Sbjct: 227 DGTTAAGGITSGGPSTIQFTPTGAISGTATLTA-SGLTWADGASPSNITLNFAGSTNYNA 285

Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170
             S+V++             + I     +F     G+ ++ G +  T    +    QG  
Sbjct: 286 T-SVVNSLTTDGSSVGQLSNLSIDPSGVVFGRYTNGQSAKLGLITLT----NFKAPQGLQ 340

Query: 171 RRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225
           R  N+   P                   ++   +E SN +   ++  +I   Q + +   
Sbjct: 341 RLGNNYFVPTYASGQPLTGQPGGGGLGVLQSSAVEQSNVDLSSQLVNLIVAQQAYQANAQ 400

Query: 226 LIDENEKSMLEAIR 239
            I    + +   + 
Sbjct: 401 TIKTQNQVVQTLLS 414


>gi|330811235|ref|YP_004355697.1| flagellar hook protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327379343|gb|AEA70693.1| Putative flagellar hook protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 432

 Score = 89.5 bits (220), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 32/124 (25%), Positives = 56/124 (45%), Gaps = 2/124 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61
           SFNIGL+   A  ++L    +N++N  T GF++ + +F +V  A    +      + V  
Sbjct: 2   SFNIGLSGLYAANKQLDVTGNNIANVATTGFKSSRAEFEDVYSATKLGSGSKTVGNGVRL 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
                    G   +TG  LD  ++G  +F L +   +  TR G FK   +G + ++ G  
Sbjct: 62  ANVSQQFGQGDVNNTGNVLDMGIQGQGFFVLSNDGSLSYTRAGTFKTDKEGYITNSDGTS 121

Query: 122 PVLD 125
            +  
Sbjct: 122 RLQG 125



 Score = 67.2 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 31/98 (31%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLED 201
             + + K I  + L S    QG      +                +  +  ++    LE+
Sbjct: 333 FSNNQTKPIGQLALASFTNEQGLQPVGGTSWKETFASGIPGYDAPQTGTLGSIVSNSLEE 392

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN N   E+ ++I     + +    I      M   I+
Sbjct: 393 SNVNLTNELVELIKAQSNYQANAKTISTQSTIMQTIIQ 430


>gi|320329353|gb|EFW85346.1| flagellar hook protein FlgE [Pseudomonas syringae pv. glycinea str.
           race 4]
 gi|330880525|gb|EGH14674.1| flagellar hook protein FlgE [Pseudomonas syringae pv. glycinea str.
           race 4]
          Length = 586

 Score = 89.5 bits (220), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 56/133 (42%), Gaps = 3/133 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SFN  ++   A  +RL    +N++N+ T+GF++ + +FS +  A +    +         
Sbjct: 2   SFNTAISGIHAANKRLEVAGNNIANSGTIGFKSSRAQFSALYSASQLGSGRNAVGDGVRL 61

Query: 64  EYLSKEVGS---FISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
             + +         ++G  LD  ++G+ +F +     +  TR G F       +V + G 
Sbjct: 62  ASMQQNFNQGESMTTSGNPLDMRIQGNGFFVVSDGGSLAYTRAGAFLKDAANFVVDSEGG 121

Query: 121 YPVLDMASVPIQI 133
                 A+   +I
Sbjct: 122 RLQGYAANEQGEI 134



 Score = 65.7 bits (158), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 33/99 (33%), Gaps = 5/99 (5%)

Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLE 200
           G  +   K I  + L S    QG   R ++  + +      +       +  ++    LE
Sbjct: 486 GFANGMNKNIGQVILASFANPQGLQARSDTRWTESADSGVADYDVPGVGTLGSLIGDGLE 545

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            SN     E+  +I     + + +  I      M   I+
Sbjct: 546 GSNVVLADELIALIQAQTAYQANSKAISTEATVMQTLIQ 584


>gi|298487856|ref|ZP_07005896.1| Flagellar hook protein flgE [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|298157581|gb|EFH98661.1| Flagellar hook protein flgE [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
          Length = 586

 Score = 89.5 bits (220), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 56/133 (42%), Gaps = 3/133 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SFN  ++   A  +RL    +N++N+ T+GF++ + +FS +  A +    +         
Sbjct: 2   SFNTAISGIHAANKRLEVAGNNIANSGTIGFKSSRAQFSALYSASQLGSGRNAVGDGVRL 61

Query: 64  EYLSKEVGS---FISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
             + +         ++G  LD  ++G+ +F +     +  TR G F       +V + G 
Sbjct: 62  ASMQQNFNQGESMTTSGNPLDMRIQGNGFFVVSDGGSLAYTRAGAFLKDAANFVVDSEGG 121

Query: 121 YPVLDMASVPIQI 133
                 A+   +I
Sbjct: 122 RLQGYAANEQGEI 134



 Score = 65.7 bits (158), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 33/99 (33%), Gaps = 5/99 (5%)

Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLE 200
           G  +   K I  + L S    QG   R ++  + +      +       +  ++    LE
Sbjct: 486 GFTNGMNKNIGQVILASFSNPQGLQARSDTRWTESADSGVADYDVPGVGTLGSLIGDGLE 545

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            SN     E+  +I     + + +  I      M   I+
Sbjct: 546 GSNVVLADELIALIQAQTAYQANSKAISTEATVMQTLIQ 584


>gi|289627764|ref|ZP_06460718.1| flagellar hook protein FlgE [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|330866423|gb|EGH01132.1| flagellar hook protein FlgE [Pseudomonas syringae pv. aesculi str.
           0893_23]
          Length = 586

 Score = 89.5 bits (220), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 56/133 (42%), Gaps = 3/133 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SFN  ++   A  +RL    +N++N+ T+GF++ + +FS +  A +    +         
Sbjct: 2   SFNTAISGIHAANKRLEVAGNNIANSGTIGFKSSRAQFSALYSASQLGSGRNAVGDGVRL 61

Query: 64  EYLSKEVGS---FISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
             + +         ++G  LD  ++G+ +F +     +  TR G F       +V + G 
Sbjct: 62  ASMQQNFNQGESMTTSGNPLDMRIQGNGFFVVSDGGSLAYTRAGAFLKDAANFVVDSEGG 121

Query: 121 YPVLDMASVPIQI 133
                 A+   +I
Sbjct: 122 RLQGYAANEQGEI 134



 Score = 65.7 bits (158), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 33/99 (33%), Gaps = 5/99 (5%)

Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLE 200
           G  +   K I  + L S    QG   R ++  + +      +       +  ++    LE
Sbjct: 486 GFTNGMNKNIGQVILASFANPQGLQARSDTRWTESADSGVADYDVPGVGTLGSLIGDGLE 545

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            SN     E+  +I     + + +  I      M   I+
Sbjct: 546 GSNVVLADELIALIQAQTAYQANSKAISTEATVMQTLIQ 584


>gi|292492363|ref|YP_003527802.1| flagellar basal body FlaE domain protein [Nitrosococcus halophilus
           Nc4]
 gi|291580958|gb|ADE15415.1| flagellar basal body FlaE domain protein [Nitrosococcus halophilus
           Nc4]
          Length = 425

 Score = 89.5 bits (220), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 61/135 (45%), Gaps = 5/135 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG--AIKNDIDQKISFVAS 61
           SFN  L+   A    L  V++N++N +T GF+  + +F+++    +  +      S V  
Sbjct: 2   SFNTSLSGLNAASSDLDVVSNNIANANTTGFKRSRAEFADIFAVSSFGSPKTAVGSGVLL 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALES---PRGIILTRDGRFKVTDDGSLVSAS 118
            +     + G+   T   LD A+ G  +FAL        ++ +R G F +  DG +V+ +
Sbjct: 62  NRAAQQFDQGNLDFTQNILDLAVSGRGFFALSPNLTNNELVYSRAGAFSINKDGYVVNGA 121

Query: 119 GKYPVLDMASVPIQI 133
           G++      +    +
Sbjct: 122 GQFLRTYPVNQDGTV 136



 Score = 73.0 bits (177), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 14/94 (14%), Positives = 29/94 (30%), Gaps = 5/94 (5%)

Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNAN 205
           +   +  + L      QG  +  N+  +  I                 ++ G LE SN +
Sbjct: 330 QNLALGKVALAQFPNEQGLRQLGNNSWAGTIDSGAAIAGEAGNGSFGLIQGGALESSNVD 389

Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              E+  +I   + F +    I+         + 
Sbjct: 390 LTAELVHLITAQRNFQANARAIETASTLTDSILN 423


>gi|289651646|ref|ZP_06482989.1| flagellar hook protein FlgE [Pseudomonas syringae pv. aesculi str.
           2250]
          Length = 586

 Score = 89.5 bits (220), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 56/133 (42%), Gaps = 3/133 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SFN  ++   A  +RL    +N++N+ T+GF++ + +FS +  A +    +         
Sbjct: 2   SFNTAISGIHAANKRLEVAGNNIANSGTIGFKSSRAQFSALYSASQLGSGRNAVGDGVRL 61

Query: 64  EYLSKEVGS---FISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
             + +         ++G  LD  ++G+ +F +     +  TR G F       +V + G 
Sbjct: 62  ASMQQNFNQGESMTTSGNPLDMRIQGNGFFVVSDGGSLAYTRAGAFLKDAANFVVDSEGG 121

Query: 121 YPVLDMASVPIQI 133
                 A+   +I
Sbjct: 122 RLQGYAANEQGEI 134



 Score = 65.7 bits (158), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 33/99 (33%), Gaps = 5/99 (5%)

Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLE 200
           G  +   K I  + L S    QG   R ++  + +      +       +  ++    LE
Sbjct: 486 GFTNGMNKNIGQVILASFANPQGLQARSDTRWTESADSGVADYDVPGVGTLGSLIGDGLE 545

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            SN     E+  +I     + + +  I      M   I+
Sbjct: 546 GSNVVLADELIALIQAQTAYQANSKAISTEATVMQTLIQ 584


>gi|313624712|gb|EFR94667.1| flagellar hook protein FlgE [Listeria innocua FSL J1-023]
          Length = 411

 Score = 89.5 bits (220), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 34/181 (18%), Positives = 64/181 (35%), Gaps = 13/181 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    ++   A +Q LS  ++N++N +T G++   V F++++            +  
Sbjct: 1   MNQTMYTAISGMNAFQQALSVTSNNIANANTTGYKKQSVVFNDLLYQNTMGSVAGGLYAG 60

Query: 61  SGKEYL-----------SKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107
           +                    GS  STG   D AL+G  +F     +   I+ TRDG F 
Sbjct: 61  TNPMSFGSGSKIGAILTDYTAGSPTSTGRNKDAALQGRGFFIAGDNAGGNIVYTRDGSFA 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           V+D+  L +  GKY +         +   +                        ++ +  
Sbjct: 121 VSDNNYLTTQQGKYVMGYATDKNGNVLNGNLQPIQIPLNSAIPGEATKNGSLSGNIPLDW 180

Query: 168 G 168
           G
Sbjct: 181 G 181



 Score = 64.9 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 17/125 (13%), Positives = 31/125 (24%), Gaps = 5/125 (4%)

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
           P  D                             +A + + +     G V+  N    P +
Sbjct: 286 PTSDGKGAATVKDYAVTDSGYIAVSYSDGTVIPVAQLAVATFSNEDGLVKMGNGEYVPGL 345

Query: 182 PPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                            +    LE SN +   E   ++     F   T +I   +  M +
Sbjct: 346 SSGDAVYGVAGQNGAGGISGSSLEGSNVDLSREFVNLMTYQSGFQGNTKVIRVADDVMKQ 405

Query: 237 AIRNI 241
            +  I
Sbjct: 406 IVNLI 410


>gi|120613059|ref|YP_972737.1| hypothetical protein Aave_4423 [Acidovorax citrulli AAC00-1]
 gi|120591523|gb|ABM34963.1| protein of unknown function DUF1078 domain protein [Acidovorax
           citrulli AAC00-1]
          Length = 425

 Score = 89.5 bits (220), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 44/188 (23%), Positives = 71/188 (37%), Gaps = 6/188 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN--DIDQKISFVAS 61
           SF  GL+   A  + L  +  N++N+ TVGF+  + +F+E+V               V  
Sbjct: 2   SFQQGLSGLNAASKNLDVIGHNVANSGTVGFKASRAEFAEMVANAIGSAGGTNAGIGVEL 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGK 120
                    G+   TG  LD A+ GD +F L+ P G    TR G FK+  +G LV+ +  
Sbjct: 62  SAVAQQFNQGNISVTGNSLDVAINGDGFFTLQQPDGSHAYTRAGNFKLDSNGQLVTNTKA 121

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
             +         I  K    N       + K          + + +      + +G +  
Sbjct: 122 QVMGYALDP---ITGKRTASNAAPLTFPTSKPIPAKQTTTITAEFNLDARAPDAAGDATA 178

Query: 181 IPPTPLED 188
            PP P   
Sbjct: 179 TPPVPATP 186



 Score = 79.5 bits (194), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 30/89 (33%), Gaps = 5/89 (5%)

Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEM 210
             + L S   +QG     N+                 +     ++ G LEDSN +   E+
Sbjct: 335 GQVALASFRNTQGLASVGNNNWVETFQSGQPVLGTPTEGKFGGLRSGALEDSNVDLTAEL 394

Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             M+   + + +    I   ++ M   + 
Sbjct: 395 VNMMTAQRAYQANAQTIKTQDQVMSTLVN 423


>gi|229189850|ref|ZP_04316861.1| Flagellar hook protein FlgE [Bacillus cereus ATCC 10876]
 gi|228593658|gb|EEK51466.1| Flagellar hook protein FlgE [Bacillus cereus ATCC 10876]
          Length = 437

 Score = 89.5 bits (220), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 61/181 (33%), Gaps = 13/181 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49
           M  +    +    A +  LS  ++N++N  TVG++  K  F +++               
Sbjct: 1   MIKALYTSITGMNAAQNALSVTSNNIANAQTVGYKKQKAIFDDLLYNNTVGSRGDGAYAG 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF--ALESPRGIILTRDGRFK 107
            +     + V           GS   T  +++ A+EG   F     +   +  TR G F 
Sbjct: 61  TNPKSIGNGVKFSGTSTDFSDGSLTLTSDKMETAIEGKGLFLVGDRNSGNVEYTRKGSFG 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           V+ D  + + SG+Y +        Q        +       S  G +         ++ +
Sbjct: 121 VSKDNYVTNTSGQYVLGYGVKTGTQEIDFSSRPSPIHIPMGSAVGGIQTDKATIGGNLPR 180

Query: 168 G 168
            
Sbjct: 181 N 181



 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 18/144 (12%), Positives = 40/144 (27%), Gaps = 9/144 (6%)

Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
                   G  +S +         +    I     +      G +    KV+  + + + 
Sbjct: 298 SGLTNYPTGKTISTTEVTGRPAAIANDYSISDGGFVMMTYSDGSM----KVVGQLAVATF 353

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
             S G ++  N                        V+    E SN +   E   ++   +
Sbjct: 354 PNSGGLMKTGNGNYIATPSAGIPGIGVAGENGAGNVRGSAKESSNVDLSAEFVDLMLYQR 413

Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242
            F     +I  +++ + E +  I 
Sbjct: 414 GFQGNAKVIKVSDEVLNEVVNLIR 437


>gi|330875984|gb|EGH10133.1| flagellar hook protein FlgE [Pseudomonas syringae pv. morsprunorum
           str. M302280PT]
          Length = 586

 Score = 89.5 bits (220), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 57/134 (42%), Gaps = 3/134 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG- 62
           SFN  ++   A  +RL    +N++N+ T+GF++ + +FS +  + +    +         
Sbjct: 2   SFNTAISGINAANKRLEVAGNNIANSGTIGFKSSRAQFSALYSSAQLGSGRNAIGDGVRL 61

Query: 63  --KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
              +    +  S  ++G  LD  ++G+ +F +     +  TR G F       +V + G 
Sbjct: 62  AATQQNFNQGDSMTTSGNPLDMRIQGNGFFVVSDKGSLAYTRAGAFLKDAANFVVDSEGG 121

Query: 121 YPVLDMASVPIQIP 134
                 A+   +I 
Sbjct: 122 RLQGYAANDKGEIM 135



 Score = 69.1 bits (167), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 35/99 (35%), Gaps = 5/99 (5%)

Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLE 200
           G  +   K I  + L S   +QG   R ++  + +      +       +  ++  G LE
Sbjct: 486 GFTNGMNKSIGQVILASFANAQGLQARSDTRWTESAESGVADYEVPGVGTLGSLVGGALE 545

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            SN     E+  +I     + + +  I      M   I+
Sbjct: 546 GSNVVLADELIALIQAQTAYQANSKAISTEATVMQTLIQ 584


>gi|320179221|gb|EFW54179.1| Flagellar basal-body rod protein FlgG [Shigella boydii ATCC 9905]
          Length = 156

 Score = 89.5 bits (220), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 51/155 (32%), Gaps = 6/155 (3%)

Query: 91  ALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEIS 149
            +        TRDG F+V  +G LV+A G      +      +         V    +  
Sbjct: 1   MMLPDGSSAYTRDGSFQVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQ 60

Query: 150 QKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNA 204
                +  + L +     G      +  +         + +        + +G++E SN 
Sbjct: 61  AAPVQVGQLNLTTFMNDTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVETSNV 120

Query: 205 NSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           N   E+  MI + + +   +  +   ++ + +  +
Sbjct: 121 NVAEELVNMIQVQRAYEINSKAVSTTDQMLQKLTQ 155


>gi|160939658|ref|ZP_02087006.1| hypothetical protein CLOBOL_04550 [Clostridium bolteae ATCC
           BAA-613]
 gi|158437449|gb|EDP15213.1| hypothetical protein CLOBOL_04550 [Clostridium bolteae ATCC
           BAA-613]
          Length = 550

 Score = 89.5 bits (220), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 79/204 (38%), Gaps = 13/204 (6%)

Query: 12  QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------KNDIDQKISFV 59
             A + +L  + +N++N +T GF++ + +F +V                  +  Q     
Sbjct: 1   MQAHQTKLDVIGNNIANVNTYGFKSSRARFQDVYYQTLQSATGGDNNKGGTNASQVGYGA 60

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSAS 118
                 L+    +  STG  +D A+ G+ +F  ++S   I  TR G  ++ ++   +  +
Sbjct: 61  QLAGVDLNMGRSALQSTGRPMDVAITGEGFFQVMDSDGNIFYTRAGNLQLDNNSGNLVDA 120

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178
             Y VL +   P+      +  ++   G+ + +     T+      ++        +   
Sbjct: 121 NGYTVLGVTGDPLGKAAGADKIHLSIPGKNNAQSANSQTINGIEYTITSQNTTSAANVTI 180

Query: 179 PNIPPTPLEDLSGVTVKRGFLEDS 202
                  L D + + VK G L+DS
Sbjct: 181 SFRLDDTLPDGADIVVKSGELKDS 204



 Score = 74.9 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 31/91 (34%), Gaps = 5/91 (5%)

Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMY 208
            I  + L + D   G     NS           +     +     +K   LE SN +   
Sbjct: 457 QIGRIDLVTFDNPYGLEGVGNSYFKTTANSGDPKLCQAGENGTGALKTSSLEMSNVDIST 516

Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           E   MI   + F + + +I  ++  + E + 
Sbjct: 517 EFADMIVTQRGFQANSRIITVSDSILEELVN 547


>gi|71734109|ref|YP_275562.1| flagellar basal-body protein [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|71554662|gb|AAZ33873.1| flagellar basal-body protein, putative [Pseudomonas syringae pv.
           phaseolicola 1448A]
          Length = 586

 Score = 89.5 bits (220), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 56/133 (42%), Gaps = 3/133 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SFN  ++   A  +RL    +N++N+ T+GF++ + +FS +  A +    +         
Sbjct: 2   SFNTAISGIHAANKRLEVAGNNIANSGTIGFKSSRAQFSALYSASQLGSGRNAVGDGVRL 61

Query: 64  EYLSKEVGS---FISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
             + +         ++G  LD  ++G+ +F +     +  TR G F       +V + G 
Sbjct: 62  ASMQQNFNQGESMTTSGNPLDMRIQGNGFFVVSDGGSLAYTRAGAFLKDAANFVVDSEGG 121

Query: 121 YPVLDMASVPIQI 133
                 A+   +I
Sbjct: 122 RLQGYAANEQGEI 134



 Score = 65.7 bits (158), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 33/99 (33%), Gaps = 5/99 (5%)

Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLE 200
           G  +   K I  + L S    QG   R ++  + +      +       +  ++    LE
Sbjct: 486 GFTNGMNKNIGQVILASFANPQGLQARSDTRWTESADSGVADYDVSGVGTLGSLIGDGLE 545

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            SN     E+  +I     + + +  I      M   I+
Sbjct: 546 GSNVVLADELIALIQAQTAYQANSKAISTEATVMQTLIQ 584


>gi|242280467|ref|YP_002992596.1| hypothetical protein Desal_3005 [Desulfovibrio salexigens DSM 2638]
 gi|242123361|gb|ACS81057.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           salexigens DSM 2638]
          Length = 549

 Score = 89.5 bits (220), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 33/134 (24%), Positives = 52/134 (38%), Gaps = 5/134 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA---IKNDIDQKISFVA 60
           S   G+    A   ++S + +N++N +TVGF++ K+ F + +         + Q    V 
Sbjct: 6   SLFSGITGLQAHGDKMSVLGNNIANVNTVGFKSAKMHFEDAISQDMSTATGVAQVGRGVQ 65

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI--ILTRDGRFKVTDDGSLVSAS 118
            G  Y     GSF +T    D A+ GD +F +          TR G F+   DG L    
Sbjct: 66  VGAIYADFAQGSFETTSESTDLAIGGDGFFIVSPKDEETSYYTRAGNFRFDKDGYLTDPH 125

Query: 119 GKYPVLDMASVPIQ 132
           G             
Sbjct: 126 GYVLQGWQVQDESN 139



 Score = 78.4 bits (191), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 27/83 (32%), Gaps = 5/83 (6%)

Query: 162 SVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHL 216
           S +   G  R   +  +                   ++    LE SN +   E   MI  
Sbjct: 464 SFNNDWGLRREGGNLFTQTRESGDALTGLPNSSGKGSIASNSLEMSNVDLAVEFVSMITT 523

Query: 217 TQKFNSITTLIDENEKSMLEAIR 239
            + F + + +I   +  M E I+
Sbjct: 524 QRGFQANSKVITTTDSMMGELIQ 546


>gi|330972414|gb|EGH72480.1| flagellar hook protein FlgE [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 582

 Score = 89.5 bits (220), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 70/195 (35%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SFN  ++   A  +RL    +N++N  T+GF++ + +FS +  + +    Q         
Sbjct: 2   SFNTAISGIHAANKRLEVAGNNIANVGTLGFKSSRAQFSALYASAQLGAGQHAVGDGVRL 61

Query: 64  EYLSKEVGSFI---STGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
             + +         S+G  LD  ++G+ +F +     +  TR G F       +V + G 
Sbjct: 62  ASVQQNFNQGETVISSGNALDMRIQGNGFFVVSDQGSLAYTRAGAFLKDAANFVVDSDGG 121

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
                 A+   +I           + + S  G    T    ++++               
Sbjct: 122 RLQGYAANDKGEIASGIR---TDLQIDTSNVGARATTTVAETINLDASLPSLARLPTFDP 178

Query: 181 IPPTPLEDLSGVTVK 195
             P     ++  T++
Sbjct: 179 ADPATYTRVATRTIQ 193



 Score = 74.5 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 32/99 (32%), Gaps = 5/99 (5%)

Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLE 200
           G  +   K I  + L S     G   R ++  +        E       +  ++  G LE
Sbjct: 482 GFTNGMTKDIGQVMLASFANPHGLQPRSDTRWAATADSGVAEYDVPGVGTLGSIVSGALE 541

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            SN     E+  +I     + + +  I      M   I+
Sbjct: 542 GSNVVLADELIALIQAQTAYQANSKAISTEVTLMQTLIQ 580


>gi|258621049|ref|ZP_05716083.1| flagellar hook protein [Vibrio mimicus VM573]
 gi|258625277|ref|ZP_05720185.1| flagellar hook protein [Vibrio mimicus VM603]
 gi|262170825|ref|ZP_06038503.1| flagellar hook protein FlgE [Vibrio mimicus MB-451]
 gi|258582450|gb|EEW07291.1| flagellar hook protein [Vibrio mimicus VM603]
 gi|258586437|gb|EEW11152.1| flagellar hook protein [Vibrio mimicus VM573]
 gi|261891901|gb|EEY37887.1| flagellar hook protein FlgE [Vibrio mimicus MB-451]
          Length = 434

 Score = 89.5 bits (220), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 72/207 (34%), Gaps = 13/207 (6%)

Query: 6   NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGK 63
            I L+   A +  L+T ++N++N +T GF+  + +F +V       N        V + K
Sbjct: 3   YISLSGLSAAQMDLNTTSNNIANANTFGFKESRAEFGDVYSTSLFTNAKTTPGQGVQAAK 62

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALES----PRGIILTRDGRFKVTDDGSLVSASG 119
                  GS I T   LD  + G  +FA+      P+   LTR+G F +  +  +V+A+ 
Sbjct: 63  VAQQFHEGSSIYTNNPLDLRIAGTGFFAVAKDKIVPQQNELTRNGAFHLDKNSYMVTAND 122

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF-------VRR 172
           ++ +    +         E   +    +  +  +        ++  +          +  
Sbjct: 123 EFLLGYEVNPDSGDVLSYEPKPINIPPQFGKPKQTANIDLGANLPANGELKDPTLFDITD 182

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFL 199
             +                  +   +L
Sbjct: 183 PETYNRTTSSTIYDSMGQPYKLTTYYL 209



 Score = 65.7 bits (158), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 15/122 (12%), Positives = 37/122 (30%), Gaps = 5/122 (4%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI- 181
             D A+         +          + +   +  + L  V   QG  ++  +       
Sbjct: 311 DQDGATTGFLTKIDFDENGSVLATYSNGQNTTLGRVALVRVANEQGLDKKGGTQWDATQF 370

Query: 182 ----PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                       S  ++  G LE SN +   E+  +I   + F + +  ++ +       
Sbjct: 371 SGDKIWGESNKGSFGSISNGSLEQSNIDMTQELVDLISAQRNFQANSRALEVHNGLQQNI 430

Query: 238 IR 239
           ++
Sbjct: 431 LQ 432


>gi|91776309|ref|YP_546065.1| flagellar hook protein FlgE [Methylobacillus flagellatus KT]
 gi|91710296|gb|ABE50224.1| protein of unknown function DUF1078-like protein [Methylobacillus
           flagellatus KT]
          Length = 410

 Score = 89.5 bits (220), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 58/123 (47%), Gaps = 2/123 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG- 62
           +F  GL+   A  + +  + +N++N  TVGF+  + +F++V        +     + +  
Sbjct: 2   AFQQGLSGLNAASKNIEVIGNNVANASTVGFKQSRTEFADVYANSLGGGNASKIGIGTKI 61

Query: 63  -KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
                    G+  ++   LD A+ G+ +F +     I  +R+G+F++  DG + +A+G+ 
Sbjct: 62  AAITQQFTQGNISNSQNPLDVAINGNGFFRMSDNGAITYSRNGQFQLDKDGYIQNAAGQR 121

Query: 122 PVL 124
              
Sbjct: 122 LTG 124



 Score = 75.7 bits (184), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 32/98 (32%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLED 201
             + +  V+  + L +     G     ++  +      P             ++   LED
Sbjct: 311 YSNGRSSVLGQVALANFRNLNGLQPLGDNQWAETSESGPPIVGVANSGGLGVLQSYRLED 370

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E+  MI   + + +    I   ++ M   + 
Sbjct: 371 SNVDLTAELVNMITAQRVYQANAQTIKTEDQIMQTLVN 408


>gi|229102353|ref|ZP_04233061.1| Flagellar hook protein flgE [Bacillus cereus Rock3-28]
 gi|229115194|ref|ZP_04244604.1| Flagellar hook protein flgE [Bacillus cereus Rock1-3]
 gi|228668334|gb|EEL23766.1| Flagellar hook protein flgE [Bacillus cereus Rock1-3]
 gi|228681000|gb|EEL35169.1| Flagellar hook protein flgE [Bacillus cereus Rock3-28]
          Length = 407

 Score = 89.5 bits (220), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 65/197 (32%), Gaps = 13/197 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49
           M  +    +    A +  LS  ++N++N  TVG++  K  F +++               
Sbjct: 1   MIKALYTSITGMNATQNALSVTSNNIANAQTVGYKKQKAMFDDLLYNNSIGAKGDGKYAG 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107
            +     + V           G+   TG +   A+EG+ +F         +  TR G F 
Sbjct: 61  TNPKSIGNGVKMSGTVTDYSDGTITLTGGKTQAAMEGNGFFVVGDSKGGNMEFTRKGTFG 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           ++ D  + +  G+Y     A+          I    +    +  G +  + G    ++  
Sbjct: 121 ISSDYYITNTEGQYVFAYPANEATGEVDLSGIPGPLQIPMGTAIGGIRTSKGTIKGNIPT 180

Query: 168 GFVRRENSGISPNIPPT 184
           G  +        +    
Sbjct: 181 GEKQITQDLPVYDNAGN 197



 Score = 65.3 bits (157), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 12/93 (12%), Positives = 30/93 (32%), Gaps = 5/93 (5%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYE 209
              + +       G ++  N   +       L   +        V+ G  E +N +   E
Sbjct: 315 AGQLAVAMFPNEGGLMKTGNGNYTATNTTGILALGASGQNGAGKVRGGAQEGANVDLSVE 374

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
              ++   + F     +I  +++ + E +  I 
Sbjct: 375 FVDLMLYQRGFQGNAKVIKVSDEVLNEVVNLIR 407


>gi|229166594|ref|ZP_04294346.1| Flagellar hook protein flgE [Bacillus cereus AH621]
 gi|228616848|gb|EEK73921.1| Flagellar hook protein flgE [Bacillus cereus AH621]
          Length = 407

 Score = 89.5 bits (220), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 65/197 (32%), Gaps = 13/197 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49
           M  +    +    A +  LS  ++N++N  TVG++  K  F +++               
Sbjct: 1   MIKALYTSITGMNATQNALSVTSNNIANAQTVGYKKQKAMFDDLLYNNSIGAKGDGKYAG 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107
            +     + V           G+   TG +   A+EG+ +F         +  TR G F 
Sbjct: 61  TNPKSIGNGVKMSGTVTDYSDGTITLTGGKTQAAMEGNGFFVVGDSKGGNMEFTRKGTFG 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           ++ D  + +  G+Y     A+          I    +    +  G +  + G    ++  
Sbjct: 121 ISSDYYITNTEGQYVFAYPANEATGEVDLSGIPGPLQIPMGTAIGGIRTSQGTIKGNIPT 180

Query: 168 GFVRRENSGISPNIPPT 184
           G  +        +    
Sbjct: 181 GEKQITQDLPVYDNAGN 197



 Score = 64.9 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 11/93 (11%), Positives = 30/93 (32%), Gaps = 5/93 (5%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYE 209
              + +       G ++  N   +       L   +        ++ G  E +N +   E
Sbjct: 315 AGQLAVAMFPNEGGLMKTGNGNYTATNTTGILALGASGQNGAGKIRGGAQEGANVDLSVE 374

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
              ++   + F     +I  +++ + E +  I 
Sbjct: 375 FVDLMLYQRGFQGNAKVIKISDEVLNEVVNLIR 407


>gi|229160717|ref|ZP_04288709.1| Flagellar hook protein flgE [Bacillus cereus R309803]
 gi|228622732|gb|EEK79566.1| Flagellar hook protein flgE [Bacillus cereus R309803]
          Length = 407

 Score = 89.5 bits (220), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 63/181 (34%), Gaps = 13/181 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49
           M  +    ++   A +  LS  ++N++N  TVG++  K  F +++               
Sbjct: 1   MIKALYTSISGMNATQNALSVTSNNIANAQTVGYKKQKAMFDDLLYNNSVGAKGDERYAG 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107
            +     + V           G+   TG +   A+EG+ +F         +  TR G F 
Sbjct: 61  TNPKSIGNGVKMSGTVTDYSDGTITLTGGKTQVAMEGNGFFVVGDSKAGNMEFTRKGTFT 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           ++ D  + +  G+Y     A           I    +    S  G +  + G+   ++  
Sbjct: 121 ISSDYYITNTEGQYVFAYPADPSTGNVDLSGIPGPLQIPMGSAIGGIRTSKGIVGGNIPA 180

Query: 168 G 168
            
Sbjct: 181 D 181



 Score = 65.3 bits (157), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 12/93 (12%), Positives = 29/93 (31%), Gaps = 5/93 (5%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYE 209
              + +       G ++  N   +       L            V+ G  E +N +   E
Sbjct: 315 AGQLAVGMFPNEGGLMKTGNGNFTATNTTGILALGVSGQNGAGKVRGGAQEGANVDLSVE 374

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
              ++   + F     +I  +++ + E +  I 
Sbjct: 375 FVDLMLYQRGFQGNAKVIKISDEVLNEVVNLIR 407


>gi|229096239|ref|ZP_04227212.1| Flagellar hook protein flgE [Bacillus cereus Rock3-29]
 gi|228687199|gb|EEL41104.1| Flagellar hook protein flgE [Bacillus cereus Rock3-29]
          Length = 407

 Score = 89.5 bits (220), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 65/197 (32%), Gaps = 13/197 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49
           M  +    +    A +  LS  ++N++N  TVG++  K  F +++               
Sbjct: 1   MIKALYTSITGMNATQNALSVTSNNIANAQTVGYKKQKAMFDDLLYNNSIGAKSDGKYAG 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107
            +     + V           G+   TG +   A+EG+ +F         +  TR G F 
Sbjct: 61  TNPKSIGNGVKMSGTVTDYSDGTITLTGGKTQAAMEGNGFFVVGDSKGGNMEFTRKGTFG 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           ++ D  + +  G+Y     A+          I    +    +  G +  + G    ++  
Sbjct: 121 ISSDYYITNTEGQYVFAYPANEATGEVDLSGIPGPLQIPMGTAIGGIRTSKGTIKGNIPT 180

Query: 168 GFVRRENSGISPNIPPT 184
           G  +        +    
Sbjct: 181 GEKQITQDLPVYDNAGN 197



 Score = 64.5 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 12/93 (12%), Positives = 30/93 (32%), Gaps = 5/93 (5%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYE 209
              + +       G ++  N   +       L   +        V+ G  E +N +   E
Sbjct: 315 AGQLAVAMFPNEGGLMKTGNGNYTATNTTGILALGASGQNGAGKVRGGAQEGANVDLSIE 374

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
              ++   + F     +I  +++ + E +  I 
Sbjct: 375 FVDLMLYQRGFQGNAKVIKVSDEVLNEVVNLIR 407


>gi|171320708|ref|ZP_02909721.1| protein of unknown function DUF1078 domain protein [Burkholderia
           ambifaria MEX-5]
 gi|171094035|gb|EDT39133.1| protein of unknown function DUF1078 domain protein [Burkholderia
           ambifaria MEX-5]
          Length = 388

 Score = 89.2 bits (219), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 2/116 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV--GAIKNDIDQKISF 58
           M  S  IG++   A  + L T+ DN++N +T GF++   +F ++        +  +  S 
Sbjct: 1   MLDSIYIGMSGLAAYSKGLQTIGDNVANLNTPGFKSSAPRFQDLCDGRPTAREGKRSGSG 60

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSL 114
           VA     L+   G    +  +LD A++GD   AL     I   R G+F + DDG +
Sbjct: 61  VAYAHATLNFRQGELRGSTGQLDLAIDGDGLLALRDGDTIRYARTGQFHIADDGFV 116



 Score = 67.6 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 34/87 (39%), Gaps = 4/87 (4%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS----GVTVKRGFLEDSNANSMYEM 210
              + L      Q  VR        +  P P    S       ++ G +E SN +   E 
Sbjct: 295 AGAVALARFADPQRLVRLGAGLFDASHLPPPRYAKSGDPLVGQLRSGAVEASNVDLSGEF 354

Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEA 237
           GQ+I + + F + + +I  + + +++ 
Sbjct: 355 GQLILIQRGFQAASQVISTSNEMIMQL 381


>gi|331017025|gb|EGH97081.1| flagellar hook protein FlgE [Pseudomonas syringae pv. lachrymans
           str. M302278PT]
          Length = 586

 Score = 89.2 bits (219), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 57/134 (42%), Gaps = 3/134 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG- 62
           SFN  ++   A  +RL    +N++N+ T+GF++ + +FS +  + +    +         
Sbjct: 2   SFNTAISGINAANKRLEVAGNNIANSGTIGFKSSRAQFSALYSSAQLGSGRNAIGDGVRL 61

Query: 63  --KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
              +    +  S  ++G  LD  ++G+ +F +     +  TR G F       +V + G 
Sbjct: 62  AATQQNFNQGDSMTTSGNPLDMRIQGNGFFVVSDKGSLAYTRAGAFLKDAANFVVDSDGG 121

Query: 121 YPVLDMASVPIQIP 134
                 A+   +I 
Sbjct: 122 RLQGYAANDKGEIM 135



 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 34/99 (34%), Gaps = 5/99 (5%)

Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLE 200
           G  +   K I  + L S    QG   R ++  + +      +       +  ++  G LE
Sbjct: 486 GFTNGMNKNIGQVILASFANPQGLQARSDTRWTESAESGVADYEVPGVGTLGSLVGGALE 545

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            SN     E+  +I     + + +  I      M   I+
Sbjct: 546 GSNVVLADELIALIQAQTAYQANSKAISTEATVMQTLIQ 584


>gi|258404710|ref|YP_003197452.1| fagellar hook-basal body protein [Desulfohalobium retbaense DSM
           5692]
 gi|257796937|gb|ACV67874.1| fagellar hook-basal body protein [Desulfohalobium retbaense DSM
           5692]
          Length = 433

 Score = 89.2 bits (219), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 60/153 (39%), Gaps = 5/153 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG---AIKNDIDQKISFVA 60
           +   G++A  A  + ++ + +N++N++T  F+  +  FS+++    +  +   Q  + V 
Sbjct: 6   ALYTGVSALGATGEAMNVIGNNLANSNTTAFKASRTLFSDLLASDVSSSSGTSQVGTGVG 65

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG--IILTRDGRFKVTDDGSLVSAS 118
                     G F  T +  D A+EG+ +F +  P       TR G F   D+G LV+  
Sbjct: 66  LASVDTVFSQGGFNPTESSTDLAIEGEGFFKVSDPNTGADAYTRAGGFNFNDEGFLVNPQ 125

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQK 151
           G                  +       G +  +
Sbjct: 126 GYRVQGYDVDGDGNTVGNLKDIYTDLSGSVPAQ 158



 Score = 78.0 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 30/89 (33%), Gaps = 4/89 (4%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNI----PPTPLEDLSGVTVKRGFLEDSNANSMYEM 210
           +A +GL     + G  +  NS          P          T++   LE S  +   + 
Sbjct: 342 LAKLGLAKFANNNGLAQVGNSLFEATNASGLPAIGTPGAGVGTIRSNALEQSTVDIAKQF 401

Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             MI   + + + +  I   +  + E + 
Sbjct: 402 TDMITTQRAYQANSRTITTTDDMLQEVVN 430


>gi|66046706|ref|YP_236547.1| flagellar basal body rod protein:protein of unknown function
           DUF1078:flagellar basal body FlaE [Pseudomonas syringae
           pv. syringae B728a]
 gi|63257413|gb|AAY38509.1| Flagellar basal body rod protein:Protein of unknown function
           DUF1078:Flagellar basal body FlaE [Pseudomonas syringae
           pv. syringae B728a]
          Length = 582

 Score = 89.2 bits (219), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 55/133 (41%), Gaps = 3/133 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SFN  ++   A  +RL    +N++N  T+GF++ + +FS +  + +    Q         
Sbjct: 2   SFNTAISGIHAANKRLEVAGNNIANVGTLGFKSSRAQFSALYASAQLGAGQHAVGDGVRL 61

Query: 64  EYLSKEVGSFI---STGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
             + +         S+G  LD  ++G+ +F +     +  TR G F       +V + G 
Sbjct: 62  ASVQQNFNQGETVISSGNALDMRIQGNGFFVVSDQGSLAYTRAGAFLKDAANFVVDSDGG 121

Query: 121 YPVLDMASVPIQI 133
                 A+   +I
Sbjct: 122 RLQGYAANDKGEI 134



 Score = 73.7 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 32/99 (32%), Gaps = 5/99 (5%)

Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLE 200
           G  +   K I  + L S     G   R ++  +        E       +  ++  G LE
Sbjct: 482 GFTNGMTKDIGQVMLASFANPHGLQPRSDTRWTATADSGVAEYDVPGVGTLGSIVSGALE 541

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            SN     E+  +I     + + +  I      M   I+
Sbjct: 542 GSNVVLADELIALIQAQTAYQANSKAISTEVTLMQTLIQ 580


>gi|330899403|gb|EGH30822.1| flagellar hook protein FlgE [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 581

 Score = 89.2 bits (219), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 55/133 (41%), Gaps = 3/133 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SFN  ++   A  +RL    +N++N  T+GF++ + +FS +  + +    Q         
Sbjct: 2   SFNTAISGIHAANKRLEVAGNNIANVGTLGFKSSRAQFSALYASAQLGAGQHAVGDGVRL 61

Query: 64  EYLSKEVGSFI---STGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
             + +         S+G  LD  ++G+ +F +     +  TR G F       +V + G 
Sbjct: 62  ASVQQNFNQGETVISSGNALDMRIQGNGFFVVSDQGSLAYTRAGAFLKDAANFVVDSDGG 121

Query: 121 YPVLDMASVPIQI 133
                 A+   +I
Sbjct: 122 RLQGYAANDKGEI 134



 Score = 74.5 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 40/129 (31%), Gaps = 5/129 (3%)

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
           ++S     +D  S       +     +   G  +   K I  + L S     G   R ++
Sbjct: 451 TSSRSAAYVDGHSAGELKSLEVGRDGILRAGFTNGMTKSIGQVMLASFANPHGLQPRSDT 510

Query: 176 GISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
             +        E       +  ++  G LE SN     E+  +I     + + +  I   
Sbjct: 511 RWTATADSGVAEYDVPGVGTLGSIVSGALEGSNVVLADELIALIQAQTAYQANSKAISTE 570

Query: 231 EKSMLEAIR 239
              M   I+
Sbjct: 571 VTLMQTLIQ 579


>gi|315281358|ref|ZP_07869998.1| flagellar hook protein FlgE [Listeria marthii FSL S4-120]
 gi|313614997|gb|EFR88501.1| flagellar hook protein FlgE [Listeria marthii FSL S4-120]
          Length = 411

 Score = 89.2 bits (219), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 34/181 (18%), Positives = 64/181 (35%), Gaps = 13/181 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    ++   A +Q LS  ++N++N +T G++   V F++++            +  
Sbjct: 1   MNQTMYTAISGMNAFQQALSVTSNNIANANTTGYKKQSVVFNDLLYQNTMGSVAGGLYAG 60

Query: 61  SGKEYL-----------SKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107
           +                    GS  STG   D AL+G  +F     +   I+ TRDG F 
Sbjct: 61  TNPMSFGSGSKIGAILTDYTAGSPTSTGRNKDAALQGRGFFIAGDNAGGNIVYTRDGSFA 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           V+D+  L +  GKY +         +   +                        ++ +  
Sbjct: 121 VSDNNYLTTQQGKYVMGYATDKNGNVLNGNLQPIQIPLNSAIPGEATKNGSLSGNIPLDW 180

Query: 168 G 168
           G
Sbjct: 181 G 181



 Score = 64.5 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 17/125 (13%), Positives = 31/125 (24%), Gaps = 5/125 (4%)

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
           P  D                             +A + + +     G V+  N    P +
Sbjct: 286 PTSDGKGAATVKDYAVTDAGYIAVSYSDGTVIPVAQLAVATFSNEDGLVKMGNGEYLPGL 345

Query: 182 PPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                            +    LE SN +   E   ++     F   T +I   +  M +
Sbjct: 346 SSGDAVYGVAGQNGAGGISGSSLEGSNVDLSREFVNLMTYQSGFQGNTKVIRVADDVMKQ 405

Query: 237 AIRNI 241
            +  I
Sbjct: 406 IVNLI 410


>gi|187924404|ref|YP_001896046.1| flagellar basal body FlaE domain protein [Burkholderia phytofirmans
           PsJN]
 gi|187715598|gb|ACD16822.1| flagellar basal body FlaE domain protein [Burkholderia phytofirmans
           PsJN]
          Length = 410

 Score = 89.2 bits (219), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 57/133 (42%), Gaps = 2/133 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           S+  GL+   A    L  + +N++N +TVGF++   +F+++              + +  
Sbjct: 2   SYQTGLSGLSAASTDLDVIGNNIANANTVGFKSSTAQFADMYANAVMTAANNQVGIGTRL 61

Query: 64  EY--LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
                    G+F  T   LD A+ G+ +F L +   ++ +R+G F +   G + +A G  
Sbjct: 62  STAEQDFSNGTFSKTDRPLDIAINGNGFFQLSNNGALVYSRNGVFHLDKSGVIENAQGLP 121

Query: 122 PVLDMASVPIQIP 134
            +        ++ 
Sbjct: 122 LMGYSPGPDGKMN 134



 Score = 69.5 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 23/195 (11%), Positives = 53/195 (27%), Gaps = 6/195 (3%)

Query: 51  DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTD 110
                           S    +F ++G           +    +      T+     +T 
Sbjct: 215 GTSGNPPAPVGPNPSGSMGTITFDTSGHLTSPNASALTFNIPNAADNGATTQSLTLNLTG 274

Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI-ATMGLYSVDMSQGF 169
                  +G   +L   +   Q+       +    G  S    ++   + L +     G 
Sbjct: 275 TTQYAGKNGVTALLPDGNSSGQLTGFSVGEDGTLTGSYSNGATLVLGQVALATFSNPNGL 334

Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFL-----EDSNANSMYEMGQMIHLTQKFNSIT 224
               N+  +        +  S  +   G L     EDSN +  +++  +I   + + + +
Sbjct: 335 ANMGNNLYAQTGDSGAAQVSSPGSTNHGVLLGGQTEDSNVDLTHQLVDLITAQRNYQANS 394

Query: 225 TLIDENEKSMLEAIR 239
             I   +      I 
Sbjct: 395 QTIKTQQTVDQALIN 409


>gi|320354325|ref|YP_004195664.1| flagellar hook-basal body protein [Desulfobulbus propionicus DSM
           2032]
 gi|320122827|gb|ADW18373.1| flagellar hook-basal body protein [Desulfobulbus propionicus DSM
           2032]
          Length = 434

 Score = 89.2 bits (219), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 31/136 (22%), Positives = 60/136 (44%), Gaps = 5/136 (3%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI---KNDIDQKISF 58
           Q++   G++      Q +S + +N++NT+T+GF+  +  FS+++ +         Q    
Sbjct: 4   QSALYSGVSGLNTNSQAMSVIGNNLANTNTLGFKGSRSIFSDLLSSNVFGSGGTSQVGRG 63

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI--ILTRDGRFKVTDDGSLVS 116
           V           G+F +T ++ D A+EG  +F L+         +R G F+  D+G LV+
Sbjct: 64  VGLSIVDSIYSQGTFETTSSDTDVAIEGVGFFVLKEAGNDTAYYSRAGAFRFDDEGYLVN 123

Query: 117 ASGKYPVLDMASVPIQ 132
             G      +      
Sbjct: 124 PEGFRVQGKLFDPTNN 139



 Score = 74.5 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 14/89 (15%), Positives = 28/89 (31%), Gaps = 4/89 (4%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL----SGVTVKRGFLEDSNANSMYEM 210
           I+ + L       G      +          +           +    LE SN +   E 
Sbjct: 343 ISQLVLAKFQNPGGLKLAGANRYIAPAEAGTIRVGLPGPELGKLFTNSLEQSNVDMGQEF 402

Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +MI   + F + + +I   ++ + E I 
Sbjct: 403 VKMITTQRGFQANSKIITTVDEMLSELIN 431


>gi|16799780|ref|NP_470048.1| flagellar hook protein FlgE [Listeria innocua Clip11262]
 gi|16802739|ref|NP_464224.1| flagellar hook protein FlgE [Listeria monocytogenes EGD-e]
 gi|47095263|ref|ZP_00232874.1| flagellar hook protein FlgE, putative [Listeria monocytogenes str.
           1/2a F6854]
 gi|116872086|ref|YP_848867.1| flagellar hook protein FlgE [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|224498779|ref|ZP_03667128.1| flagellar hook protein FlgE [Listeria monocytogenes Finland 1988]
 gi|224501998|ref|ZP_03670305.1| flagellar hook protein FlgE [Listeria monocytogenes FSL R2-561]
 gi|254829354|ref|ZP_05234041.1| flagellar hook protein FlgE [Listeria monocytogenes FSL N3-165]
 gi|254900067|ref|ZP_05259991.1| flagellar hook protein FlgE [Listeria monocytogenes J0161]
 gi|254911380|ref|ZP_05261392.1| conserved hypothetical protein [Listeria monocytogenes J2818]
 gi|254935707|ref|ZP_05267404.1| flagellar hook protein FlgE [Listeria monocytogenes F6900]
 gi|255027496|ref|ZP_05299482.1| flagellar hook protein FlgE [Listeria monocytogenes FSL J2-003]
 gi|16410086|emb|CAC98775.1| lmo0697 [Listeria monocytogenes EGD-e]
 gi|16413157|emb|CAC95937.1| lin0705 [Listeria innocua Clip11262]
 gi|47016334|gb|EAL07256.1| flagellar hook protein FlgE, putative [Listeria monocytogenes str.
           1/2a F6854]
 gi|116740964|emb|CAK20084.1| flagellar hook protein FlgE, putative [Listeria welshimeri serovar
           6b str. SLCC5334]
 gi|258601767|gb|EEW15092.1| flagellar hook protein FlgE [Listeria monocytogenes FSL N3-165]
 gi|258608290|gb|EEW20898.1| flagellar hook protein FlgE [Listeria monocytogenes F6900]
 gi|293589317|gb|EFF97651.1| conserved hypothetical protein [Listeria monocytogenes J2818]
 gi|313620066|gb|EFR91579.1| flagellar hook protein FlgE [Listeria innocua FSL S4-378]
          Length = 411

 Score = 89.2 bits (219), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 34/181 (18%), Positives = 64/181 (35%), Gaps = 13/181 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    ++   A +Q LS  ++N++N +T G++   V F++++            +  
Sbjct: 1   MNQTMYTAISGMNAFQQALSVTSNNIANANTTGYKKQSVVFNDLLYQNTMGSVAGGLYAG 60

Query: 61  SGKEYL-----------SKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107
           +                    GS  STG   D AL+G  +F     +   I+ TRDG F 
Sbjct: 61  TNPMSFGSGSKIGAILTDYTAGSPTSTGRNKDAALQGRGFFIAGDNAGGNIVYTRDGSFA 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           V+D+  L +  GKY +         +   +                        ++ +  
Sbjct: 121 VSDNNYLTTQQGKYVMGYATDKNGNVLNGNLQPIQIPLNSAIPGEATKNGSLSGNIPLDW 180

Query: 168 G 168
           G
Sbjct: 181 G 181



 Score = 64.5 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 17/125 (13%), Positives = 31/125 (24%), Gaps = 5/125 (4%)

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
           P  D                             +A + + +     G V+  N    P +
Sbjct: 286 PTSDGKGAATVKDYAVTDSGYIAVSYSDGTVIPVAQLAVATFSNEDGLVKMGNGEYVPGL 345

Query: 182 PPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                            +    LE SN +   E   ++     F   T +I   +  M +
Sbjct: 346 SSGDAVYGVAGQNGAGGISGSSLEGSNVDLSREFVNLMTYQSGFQGNTKVIRVADDVMKQ 405

Query: 237 AIRNI 241
            +  I
Sbjct: 406 IVNLI 410


>gi|289433975|ref|YP_003463847.1| flagellar hook protein FlgE, putative [Listeria seeligeri serovar
           1/2b str. SLCC3954]
 gi|289170219|emb|CBH26759.1| flagellar hook protein FlgE, putative [Listeria seeligeri serovar
           1/2b str. SLCC3954]
 gi|313634374|gb|EFS00969.1| flagellar hook protein FlgE [Listeria seeligeri FSL N1-067]
 gi|313639059|gb|EFS04046.1| flagellar hook protein FlgE [Listeria seeligeri FSL S4-171]
          Length = 411

 Score = 89.2 bits (219), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 35/146 (23%), Positives = 60/146 (41%), Gaps = 13/146 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49
           M  +    ++   A +Q LS  ++N++N +T G++   V F++++               
Sbjct: 1   MNQTMYTAISGMNAFQQALSVTSNNIANANTTGYKKQSVVFNDLLYQNTMGSVAGGLYAG 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107
            +     S    G        GS  STG   D AL+G  +F     +   I+ TRDG F 
Sbjct: 61  TNPMSFGSGAKIGAILTDYTAGSPTSTGRNKDAALQGRGFFIAGDNAGGNIVYTRDGSFA 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQI 133
           V+D+  L +  GKY +         +
Sbjct: 121 VSDNNYLTTQQGKYVMGYATDKNGNV 146



 Score = 64.9 bits (156), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 21/175 (12%), Positives = 44/175 (25%), Gaps = 8/175 (4%)

Query: 72  SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPI 131
           ++ + G   + A   +           I   D    ++   +  +     P  D      
Sbjct: 239 NYNAQGELTNAAALRNIQINTTVNGKQI---DMDLNLSGLTNYGTNQVFSPTSDGKGAAT 295

Query: 132 QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-- 189
                                  +A + + +     G V+  N    P +          
Sbjct: 296 VKDYAITDSGYIAVSYSDGTVIPVAQLAVATFSNEDGLVKMGNGEYVPGLSSGDAVYGVA 355

Query: 190 ---SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
                  +    LE SN +   E   ++     F   T +I   +  M + +  I
Sbjct: 356 GQNGAGGISGSSLEGSNVDLSREFVNLMTYQSGFQGNTKVIRVADDVMKQIVNLI 410


>gi|213967581|ref|ZP_03395729.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tomato T1]
 gi|301385714|ref|ZP_07234132.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tomato Max13]
 gi|302060074|ref|ZP_07251615.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tomato K40]
 gi|302134833|ref|ZP_07260823.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tomato NCPPB
           1108]
 gi|213927882|gb|EEB61429.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tomato T1]
          Length = 586

 Score = 89.2 bits (219), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 57/134 (42%), Gaps = 3/134 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG- 62
           SFN  ++   A  +RL    +N++N+ T+GF++ + +FS +  + +    +         
Sbjct: 2   SFNTAISGINAANKRLEVAGNNIANSGTIGFKSSRAQFSALYSSAQLGSGRNAIGDGVRL 61

Query: 63  --KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
              +    +  S  ++G  LD  ++G+ +F +     +  TR G F       +V + G 
Sbjct: 62  AATQQNFNQGDSMTTSGNPLDMRIQGNGFFVVSDKGSLAYTRAGAFLKDAANFVVDSEGG 121

Query: 121 YPVLDMASVPIQIP 134
                 A+   +I 
Sbjct: 122 RLQGYAANDKGEIM 135



 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 34/99 (34%), Gaps = 5/99 (5%)

Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLE 200
           G  +   K I  + L S    QG   R ++  + +      +       +  ++  G LE
Sbjct: 486 GFTNGMNKNIGQVILASFANPQGLQARSDTRWTESAESGVADYEVPGVGTLGSLVGGALE 545

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            SN     E+  +I     + + +  I      M   I+
Sbjct: 546 GSNVVLADELIALIQAQTAYQANSKAISTEATVMQTLIQ 584


>gi|254830312|ref|ZP_05234967.1| flagellar hook protein FlgE [Listeria monocytogenes 10403S]
          Length = 411

 Score = 89.2 bits (219), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 34/181 (18%), Positives = 64/181 (35%), Gaps = 13/181 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    ++   A +Q LS  ++N++N +T G++   V F++++            +  
Sbjct: 1   MNQTMYTAISGMNAFQQALSVTSNNIANANTTGYKKQSVVFNDLLYQNTMGSVAGGLYAG 60

Query: 61  SGKEYL-----------SKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107
           +                    GS  STG   D AL+G  +F     +   I+ TRDG F 
Sbjct: 61  TNPMSFGSGSKIGAILTDYTAGSPTSTGRNKDAALQGRGFFIAGDNAGGNIVYTRDGSFA 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           V+D+  L +  GKY +         +   +                        ++ +  
Sbjct: 121 VSDNNYLTTQQGKYVMGYATDKNGNVLNGNLQPIQIPLNSAIPGEATKNGSLSGNIPLDW 180

Query: 168 G 168
           G
Sbjct: 181 G 181



 Score = 64.5 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 17/125 (13%), Positives = 31/125 (24%), Gaps = 5/125 (4%)

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
           P  D                             +A + + +     G V+  N    P +
Sbjct: 286 PTSDGKGAATVKDYAVTDAGYIAVSYSDGTVIPVAQLAVATFSNEDGLVKMGNGEYVPGL 345

Query: 182 PPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                            +    LE SN +   E   ++     F   T +I   +  M +
Sbjct: 346 SSGDAVYGVAGQNGAGGISGSSLEGSNVDLSREFVNLMTYQSGFQGNTKVIRVADDVMKQ 405

Query: 237 AIRNI 241
            +  I
Sbjct: 406 IVNLI 410


>gi|309788147|ref|ZP_07682753.1| flagellar basal-body rod protein flgG [Shigella dysenteriae 1617]
 gi|308923999|gb|EFP69500.1| flagellar basal-body rod protein flgG [Shigella dysenteriae 1617]
          Length = 156

 Score = 89.2 bits (219), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 51/155 (32%), Gaps = 6/155 (3%)

Query: 91  ALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEIS 149
            +        TRDG F+V  +G LV+A G      +      +         V    +  
Sbjct: 1   MMLPDGSSAYTRDGSFQVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQ 60

Query: 150 QKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNA 204
                +  + L +     G      +  +         + +        + +G++E SN 
Sbjct: 61  AAPVQVGQLNLTTFMNDTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVETSNV 120

Query: 205 NSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           N   E+  MI + + +   +  +   ++ + +  +
Sbjct: 121 NVAEELVNMIQVQRAYEINSKAMSTTDQMLQKLTQ 155


>gi|77460469|ref|YP_349976.1| flagellar hook protein FlgE [Pseudomonas fluorescens Pf0-1]
 gi|77384472|gb|ABA75985.1| putative flagellar hook protein [Pseudomonas fluorescens Pf0-1]
          Length = 443

 Score = 89.2 bits (219), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 2/117 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--ISFVAS 61
           SFNIGL+   A  ++L    +N++N  T GF++ + +F +V  + +     K   + V  
Sbjct: 2   SFNIGLSGLYAANKQLDVTGNNIANVATAGFKSSRAEFEDVYSSTRLGSGSKVIGNGVRL 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSAS 118
                    G   +TG  LD  + G  +F + +   I  TR G FKV ++G + +  
Sbjct: 62  ANVSQQFTQGDINNTGNVLDMGINGSGFFTMSNNGSISYTRAGTFKVDNNGFITNTD 118



 Score = 69.5 bits (168), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 35/129 (27%), Gaps = 5/129 (3%)

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
             +   P  D  +         +          + + K I  + L S    QG      +
Sbjct: 313 DTARSIPTQDGYATGQITNLTIDGTGTLFANFSNNQSKAIGQVALASFTNEQGLQPIGGT 372

Query: 176 GISPNIPP-----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
           G               +  +   V    LE+SN N   E+  +I     + +    I   
Sbjct: 373 GWKETFASGVPGYDAPKTGTLGEVVSNSLEESNVNLTNELVDLIKGQSNYQANAKTISTQ 432

Query: 231 EKSMLEAIR 239
              M   I+
Sbjct: 433 STIMQTIIQ 441


>gi|330975977|gb|EGH76043.1| flagellar hook protein FlgE [Pseudomonas syringae pv. aptata str.
           DSM 50252]
          Length = 581

 Score = 89.2 bits (219), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 55/133 (41%), Gaps = 3/133 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SFN  ++   A  +RL    +N++N  T+GF++ + +FS +  + +    Q         
Sbjct: 2   SFNTAISGIHAANKRLEVAGNNIANVGTLGFKSSRAQFSALYASAQLGAGQHAVGDGVRL 61

Query: 64  EYLSKEVGSFI---STGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
             + +         S+G  LD  ++G+ +F +     +  TR G F       +V + G 
Sbjct: 62  ASVQQNFNQGETVISSGNALDMRIQGNGFFVVSDQGSLAYTRAGAFLKDAANFVVDSDGG 121

Query: 121 YPVLDMASVPIQI 133
                 A+   +I
Sbjct: 122 RLQGYAANDKGEI 134



 Score = 72.6 bits (176), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 40/129 (31%), Gaps = 5/129 (3%)

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
           ++S     +D  S       +     +   G  +   K I  + L S     G   R ++
Sbjct: 451 TSSRSAAYVDGHSAGELKSLEVGRDGILRAGFTNGMTKSIGQVMLASFANPHGLQPRSDT 510

Query: 176 GISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
             +        E       +  ++  G LE SN     E+  +I     + + +  I   
Sbjct: 511 RGTATADSGVAEYDVPGVGTLGSIVSGALEGSNVVLADELIALIQAQTAYQANSKAISTE 570

Query: 231 EKSMLEAIR 239
              M   I+
Sbjct: 571 VTLMQTLIQ 579


>gi|284801027|ref|YP_003412892.1| flagellar hook protein FlgE [Listeria monocytogenes 08-5578]
 gi|284994169|ref|YP_003415937.1| flagellar hook protein FlgE [Listeria monocytogenes 08-5923]
 gi|284056589|gb|ADB67530.1| flagellar hook protein FlgE [Listeria monocytogenes 08-5578]
 gi|284059636|gb|ADB70575.1| flagellar hook protein FlgE [Listeria monocytogenes 08-5923]
          Length = 411

 Score = 89.2 bits (219), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 34/181 (18%), Positives = 64/181 (35%), Gaps = 13/181 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    ++   A +Q LS  ++N++N +T G++   V F++++            +  
Sbjct: 1   MNQTMYTAISGMNAFQQALSVTSNNIANANTTGYKKQSVVFNDLLYQNTMGSVAGGLYAG 60

Query: 61  SGKEYL-----------SKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107
           +                    GS  STG   D AL+G  +F     +   I+ TRDG F 
Sbjct: 61  TNPMSFGSGSKIGAILTDYTAGSPTSTGRNKDAALQGRGFFIAGDNAGGNIVYTRDGSFA 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           V+D+  L +  GKY +         +   +                        ++ +  
Sbjct: 121 VSDNNYLTTQQGKYVMGYATDKNGNVLNGNLQPIQIPLNSAIPGEATKNGSLSGNIPLDW 180

Query: 168 G 168
           G
Sbjct: 181 G 181



 Score = 64.5 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 17/144 (11%), Positives = 36/144 (25%), Gaps = 5/144 (3%)

Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162
           +    ++   +  +     P  D                             +A + + +
Sbjct: 267 NMSLNLSGLTNYGTNQVFSPTSDGKGAATVKDYAVTDSGYIAVSYSDGTVIPVAQLAVAT 326

Query: 163 VDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLT 217
                G V+  N    P +                 +    LE SN +   E   ++   
Sbjct: 327 FSNEDGLVKMGNGEYVPGLSSGDAVYGVAGQNGAGGISGSSLEGSNVDLSREFVNLMTYQ 386

Query: 218 QKFNSITTLIDENEKSMLEAIRNI 241
             F   T +I   +  M + +  I
Sbjct: 387 SGFQGNTKVIRVADDVMKQIVNLI 410


>gi|150395503|ref|YP_001325970.1| flagellar hook protein FlgE [Sinorhizobium medicae WSM419]
 gi|150027018|gb|ABR59135.1| flagellar basal body FlaE domain protein [Sinorhizobium medicae
           WSM419]
          Length = 402

 Score = 89.2 bits (219), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 41/191 (21%), Positives = 75/191 (39%), Gaps = 4/191 (2%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
              G++   A   RLSTVA+N++N +T G++    +FS ++    N        V +   
Sbjct: 7   MRTGVSGMNAQSNRLSTVAENIANANTTGYKRASTEFSSMILPSGNGAYNSG-GVQTEVR 65

Query: 65  YLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASGKYPV 123
           Y   + G+   T +  D A++G  +F +E +     LTR G F    +G+LV+A+G   +
Sbjct: 66  YSISQQGATTFTTSASDLAIDGGGFFIVEGANGQEYLTRAGSFVPDSEGNLVNAAGFTLM 125

Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183
                  +        F+   +  ++ KG + A  G  +  M          G       
Sbjct: 126 GYEYEAGVDPTVVVNGFDGLTRVNLASKGLIAA--GSTTGSMGANLPSGAAVGDISTTSL 183

Query: 184 TPLEDLSGVTV 194
              +      +
Sbjct: 184 VVYDSQGNTRI 194



 Score = 69.1 bits (167), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 17/138 (12%), Positives = 39/138 (28%), Gaps = 7/138 (5%)

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           K T  G   +A G     +  S         +     +        +    + L +V   
Sbjct: 264 KTTQLGYAFNADGGSIDGNAPSKVAGYQIDSDGIVYVKYENGKLDPR--YRIALANVQSP 321

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFN 221
                   +  S  +    +      +     +  G LE SN +   E+  MI   + + 
Sbjct: 322 DKLKPESGNVYSQGVDSGVIITGFAGSGDFGEILSGALESSNVDIAEELTAMIESQRNYT 381

Query: 222 SITTLIDENEKSMLEAIR 239
           + + +     + +   + 
Sbjct: 382 ANSKVFQTGSELLEVLVN 399


>gi|313905151|ref|ZP_07838520.1| fagellar hook-basal body protein [Eubacterium cellulosolvens 6]
 gi|313470054|gb|EFR65387.1| fagellar hook-basal body protein [Eubacterium cellulosolvens 6]
          Length = 247

 Score = 89.2 bits (219), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 86/253 (33%), Gaps = 17/253 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------Q 54
           M  SF +G       +++L  V++N++N +  GF+     F+E+V    N         Q
Sbjct: 1   MDMSFWVGSIGASQAQRKLDVVSNNLANVNNNGFKPKNAVFAELVNYNLNAGRDETTELQ 60

Query: 55  KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI---ILTRDGRFKVTDD 111
             +              +   T   LD+A+  D  F     +      LTRDG F     
Sbjct: 61  AGAGAIVSATNTDFRSAALTQTNRLLDYAIMTDNQFFQVRDQATGAITLTRDGHFHAGQM 120

Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171
                  G++ ++  +   +   Q    +     G    +      +G+Y+V        
Sbjct: 121 -----QDGRFVLMTDSDKFVLNTQGQLTYLDVTDGADEGRLAEGQQIGIYTVPFPSRLQN 175

Query: 172 RENSGIS--PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
             +            P+  +   TV  G LE S  +   E   MI   + F+    ++  
Sbjct: 176 VGDDDFRVREGDNNNPITLVELPTVVTGALEQSGTDIAKEFTNMIEAQRAFSYNLRMVQT 235

Query: 230 NEKSMLEAIRNIA 242
           +++   + I  + 
Sbjct: 236 SDEVA-QTINGLR 247


>gi|296135673|ref|YP_003642915.1| fagellar hook-basal body protein [Thiomonas intermedia K12]
 gi|295795795|gb|ADG30585.1| fagellar hook-basal body protein [Thiomonas intermedia K12]
          Length = 414

 Score = 89.2 bits (219), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 54/129 (41%), Gaps = 4/129 (3%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA----IKNDIDQKIS 57
            ++F   L+   A    L  + +N++N +TVGF++   +F++   A          Q   
Sbjct: 1   MSTFQTALSGLQAASTDLQVMGNNIANANTVGFKSSNAQFADSYAAAIAGTSPQYGQVGI 60

Query: 58  FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSA 117
             +          G+  ST   LD A+ G  +F        +  R+G+F++  +G +V A
Sbjct: 61  GTSVATVAQQFSQGNIESTSNPLDVAINGSGFFQFNYNGATVYGRNGQFQLDQNGYIVDA 120

Query: 118 SGKYPVLDM 126
           +G   +   
Sbjct: 121 AGGQLIGTP 129



 Score = 39.9 bits (91), Expect = 0.31,   Method: Composition-based stats.
 Identities = 17/131 (12%), Positives = 40/131 (30%), Gaps = 9/131 (6%)

Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRE 173
           +V++             + I     +F     G+ ++ G +  T    +    QG  R  
Sbjct: 287 VVNSLTTDGSSVGQLSNLSIDPSGVVFGRYTNGQSAKLGLITLT----NFKAPQGLQRLG 342

Query: 174 NSGISPN-----IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228
           N+   P                   ++   +E SN +   ++  +I   Q + +    I 
Sbjct: 343 NNYFVPTYASGQPLTGQPGGGGLGVLQSSAVEQSNVDLSSQLVNLIVAQQAYQANAQTIK 402

Query: 229 ENEKSMLEAIR 239
              + +   + 
Sbjct: 403 TQNQVVQTLLS 413


>gi|332531618|ref|ZP_08407515.1| flagellar hook protein FlgE [Hylemonella gracilis ATCC 19624]
 gi|332038981|gb|EGI75410.1| flagellar hook protein FlgE [Hylemonella gracilis ATCC 19624]
          Length = 512

 Score = 89.2 bits (219), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 56/156 (35%), Gaps = 3/156 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN--DIDQKISFVAS 61
            F  GL+   A  + L  + +N++N +T GF++ + +F +V  +             V  
Sbjct: 2   GFQQGLSGLNASSRSLDVIGNNIANANTTGFKSGRAEFGDVFASSIGASGAGTIGIGVEV 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASGK 120
                    G+   T  +LD A+ G  +FAL+        +R G FK+   G +V+ +G 
Sbjct: 62  STVSQQFTQGNIAITNNDLDVAINGSGFFALQLQDGSRAYSRAGEFKLDPLGYVVTNTGA 121

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156
             +                       +     +  A
Sbjct: 122 QVMGFPTDPAGNRTSVTLQPMRMPTSQGIAANQTTA 157



 Score = 76.1 bits (185), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 22/205 (10%), Positives = 52/205 (25%), Gaps = 8/205 (3%)

Query: 43  EVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTR 102
           ++  A  N       +                +T +     +         +   I L  
Sbjct: 306 DLTNANNNTALAFADYSVDVGTIDPDGAVGGTTTSSTNASMIINVTLPPSPNVTTIGLNG 365

Query: 103 DGRFKVTDDGSLVSASG---KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG 159
            G   +   G +   +         D       +  K E   +      + + +    + 
Sbjct: 366 TGNISIDLSGIVQHNTRFTAGDLSQDGYPPGDMVGLKIEDNGIITARFSNGETQAFGQLA 425

Query: 160 LYSVDMSQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMI 214
           L +    QG     N                        ++ G LE+S+ +   E+  M+
Sbjct: 426 LANFRNVQGLSPTGNGEWIETQASGQPIFGGPTEGNLGELRSGALEESSVDLTKELVNMM 485

Query: 215 HLTQKFNSITTLIDENEKSMLEAIR 239
              + + +    I   ++ M   + 
Sbjct: 486 TAQRTYQANAQTIKTQDQVMQTLVN 510


>gi|226939374|ref|YP_002794447.1| Flagellar hook protein FlgE [Laribacter hongkongensis HLHK9]
 gi|226714300|gb|ACO73438.1| Flagellar hook protein FlgE [Laribacter hongkongensis HLHK9]
          Length = 526

 Score = 89.2 bits (219), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 37/169 (21%), Positives = 75/169 (44%), Gaps = 3/169 (1%)

Query: 8   GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVASGKEY 65
           GL+   A  ++L  + +N++N+ TVGF+  + +F+++  A    +   Q    V +    
Sbjct: 6   GLSGINAASKQLDAIGNNVANSSTVGFKGSRAEFADMFAANFYGVAATQNGIGVNTTLIA 65

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125
                G+  +TG +LD A+ G+ +F +++  GI  TR+G+F++  +G  ++ +G   +  
Sbjct: 66  QQFGQGNITTTGNQLDLAISGNGFFVMQNANGISYTRNGQFQIDREG-YINNNGDKLMGW 124

Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174
                   P          K + S      +  G  S+  +     R N
Sbjct: 125 QVDDRTTPPSVQNGNLGPLKIDNSLLEPRPSDYGGESMRFNINLDSRNN 173



 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 35/98 (35%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLED 201
             + + KVI  + L +    QG     N+                 +     ++   LED
Sbjct: 427 YSNGQTKVIGQVVLANFANQQGLQPIGNNRWMETYNSGNPTLNDPGSTNVGLIQSQALED 486

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E+  MI   + + +    I  +++ +   ++
Sbjct: 487 SNVDLTGELVNMITAQRYYQANAQTIKVHDQVLQSLMQ 524


>gi|262404540|ref|ZP_06081095.1| flagellar hook protein FlgE [Vibrio sp. RC586]
 gi|262349572|gb|EEY98710.1| flagellar hook protein FlgE [Vibrio sp. RC586]
          Length = 434

 Score = 89.2 bits (219), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 72/207 (34%), Gaps = 13/207 (6%)

Query: 6   NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGK 63
            I L+   A +  L+T ++N++N +T GF+  + +F +V       N        V + K
Sbjct: 3   YISLSGLSAAQMDLNTTSNNIANANTFGFKESRAEFGDVYSTSLFTNAKTTPGQGVQAAK 62

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFAL----ESPRGIILTRDGRFKVTDDGSLVSASG 119
                  GS I T   LD  + G  +FA+      P+   LTR+G F +  +  +V+A+ 
Sbjct: 63  VAQQFHEGSSIYTNNPLDLRIAGTGFFAVAKDKMVPQQNELTRNGAFHLDKNSYMVTAND 122

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF-------VRR 172
           ++ +    +         E   +    +  +  +        ++  +          +  
Sbjct: 123 EFLLGYEVNPDSGDVLSYEPKPINIPPQFGKPKQTANIDLAANLPANGDLKDPALFDITD 182

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFL 199
             +                  +   +L
Sbjct: 183 PETYNRTTSSTIYDSMGQPYKLTTYYL 209



 Score = 66.8 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 16/122 (13%), Positives = 38/122 (31%), Gaps = 5/122 (4%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI- 181
             D A+         +          + +   +  + L  V   QG  ++  +       
Sbjct: 311 DQDGATTGFLTKIDFDENGSVLATYSNGQNTTLGRVALVRVANEQGLDKKGGTQWDATQF 370

Query: 182 ----PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                       S  +V  G LE SN +   E+  +I   + F + +  ++ + +     
Sbjct: 371 SGDKIWGESNKGSFGSVSNGSLEQSNIDMTQELVDLISAQRNFQANSRALEVHNQLQQNI 430

Query: 238 IR 239
           ++
Sbjct: 431 LQ 432


>gi|116626495|ref|YP_828651.1| hypothetical protein Acid_7458 [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116229657|gb|ABJ88366.1| protein of unknown function DUF1078 domain protein [Candidatus
           Solibacter usitatus Ellin6076]
          Length = 421

 Score = 89.2 bits (219), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 4/130 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---DIDQKIS 57
           M TSF+  L+A  A    +  V +N++N +T GF+T  V F ++V           Q   
Sbjct: 1   MFTSFSTALSALSATATAVDVVGNNLANLNTPGFKTNVVYFRDLVTQSLGAGLGETQVGF 60

Query: 58  FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVS 116
                        G+  S+   LD A++GD +F  ++ +   + TR G F+V D G+L +
Sbjct: 61  GTGRPLTIRQFTQGAIQSSTGLLDAAVQGDGFFVAKNAQGNTVYTRAGNFQVDDAGNLKT 120

Query: 117 ASGKYPVLDM 126
            +G+      
Sbjct: 121 NTGESVQGWT 130



 Score = 74.5 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 17/143 (11%), Positives = 47/143 (32%), Gaps = 10/143 (6%)

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-----SQKGKVIATMGLY 161
           +  + G  ++  G+      +S       +     + + G++       +  V+  + + 
Sbjct: 276 RTDNGGGRITQFGQPSSASASSQNGSAAAQLIRVGLADGGKMLAQYSDGQQVVVGQVAMA 335

Query: 162 SVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
           SV   +  +   N+    +                  +  G +E S  +   E   +I L
Sbjct: 336 SVRNPESLIAVGNNNYQASARTATPAIGLPNTGGRGDIVGGAIEASTVDIAKEFTNLIVL 395

Query: 217 TQKFNSITTLIDENEKSMLEAIR 239
            + + + + +I   ++   E I 
Sbjct: 396 QRGYQANSRVITTVDELSQETIN 418


>gi|88811801|ref|ZP_01127055.1| flagellar hook protein [Nitrococcus mobilis Nb-231]
 gi|88791192|gb|EAR22305.1| flagellar hook protein [Nitrococcus mobilis Nb-231]
          Length = 400

 Score = 89.2 bits (219), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 39/192 (20%), Positives = 69/192 (35%), Gaps = 10/192 (5%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV--VGAIKNDIDQKISFVAS 61
           SF   L    A    L    +N++N+ T GF++ + +F+++  +  +          V  
Sbjct: 2   SFETALTGLNAASADLDVTGNNVANSATTGFKSSRAEFADIYALSNVGTAQTSIGQGVRL 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
                    G F  TG  LD A+ G  +FAL +      +R+G F++  DG +V A G  
Sbjct: 62  AAVTQQFTQGQFDFTGNTLDLAVNGTGFFALNANGTTAYSRNGAFQLDRDGFIVDADGHR 121

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
                A     I         G  G++      +A     ++ +S     R  +  +   
Sbjct: 122 LNGYQAGSNGAI--------SGALGDLQVNIGNVAPQATANIGLSANLDARAATIPTAFD 173

Query: 182 PPTPLEDLSGVT 193
              P       +
Sbjct: 174 AADPATYNFSTS 185



 Score = 74.1 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 13/94 (13%), Positives = 33/94 (35%), Gaps = 5/94 (5%)

Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNAN 205
           + + +  + L      Q   +  ++  +           +       T++ G LE SN N
Sbjct: 305 QSQTLGQIALSRFPSPQSLQQIGDTHWAETFASGAPVTAAPGSSGVGTIQGGALEKSNVN 364

Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              ++  MI   + F + + +I   ++     + 
Sbjct: 365 LTEQLVHMITAQRNFQANSQMISTQDQITQSILN 398


>gi|83647173|ref|YP_435608.1| flagellar hook protein FlgE [Hahella chejuensis KCTC 2396]
 gi|83635216|gb|ABC31183.1| Flagellar hook protein FlgE [Hahella chejuensis KCTC 2396]
          Length = 651

 Score = 89.2 bits (219), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 63/173 (36%), Gaps = 3/173 (1%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASG 62
           FNI L    A    L    +N++N  T GF+  + +F ++          +     V   
Sbjct: 3   FNIALTGIRAASVDLEVTGNNIANASTTGFKRSRAEFGDLYANSFLSLGTNPVGDGVRVQ 62

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKY 121
           K       G+   T   LD A+ G+ +F L++       +R G F +  +G++V++SG +
Sbjct: 63  KVRQEFAQGNLSFTENGLDLAINGEGFFILDTNNGDRRYSRAGAFGIDKEGNVVNSSGMH 122

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174
               +A+    +        + +      +   +               R ++
Sbjct: 123 LQGFVANDSGVVSGVLGDLVIDDTSLAPDRTTRVDANLNLDASEPVLLERGDS 175



 Score = 73.7 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 54/207 (26%), Gaps = 9/207 (4%)

Query: 38  KVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG 97
           +  +S V     +  +     V           G+       L+ A  G           
Sbjct: 447 RASYSLVFDQDGSINEVLSDDVLISNWTPLAPDGTPNGAEGPLNVADGGTLPIPDPPTSS 506

Query: 98  IILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157
                 G          V+   +        + + +     IF     GE     KV+  
Sbjct: 507 NFFVDLGTTTQYGSAFAVNDLQQNGFTTGRLIGLDVDDGGVIFARYTNGE----SKVLGQ 562

Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQ 212
           + L + +  QG      +              S  T     ++   LEDSN +   ++  
Sbjct: 563 VALANFNDIQGLAPVGETTWVETFNSGNPVIGSPGTASLGAIRSSSLEDSNVDLSEQLVG 622

Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIR 239
           +I   + + +    I+         I 
Sbjct: 623 LIIAQRNYQANAKTIETANAITQTIIN 649


>gi|237817502|ref|ZP_04596493.1| flagellar hook protein FlgE [Brucella abortus str. 2308 A]
 gi|237787337|gb|EEP61554.1| flagellar hook protein FlgE [Brucella abortus str. 2308 A]
          Length = 456

 Score = 89.2 bits (219), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 5/123 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M      G++   A   RLSTVADN++N  TVG++  + +FS +V           S V 
Sbjct: 66  MMR---TGVSGMNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAGQYNSGS-VL 121

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASG 119
           +   Y   + G   ST +  D A++G+ +F ++ P G    TR G F    +G LV+++G
Sbjct: 122 TDVRYGISDQGGIRSTSSTTDLAIDGNGYFVVQGPGGSTYLTRAGSFVPDKNGDLVNSAG 181

Query: 120 KYP 122
            Y 
Sbjct: 182 YYL 184



 Score = 68.4 bits (165), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 22/54 (40%)

Query: 186 LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +      +  G LE+SNA+   E+  MI   + + + + +     + M   + 
Sbjct: 400 PQGDGMGKIMSGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGFELMDVLVN 453


>gi|114320057|ref|YP_741740.1| flagellar basal body FlaE domain-containing protein
           [Alkalilimnicola ehrlichii MLHE-1]
 gi|114226451|gb|ABI56250.1| flagellar basal body FlaE domain protein [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 430

 Score = 88.8 bits (218), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 34/160 (21%), Positives = 61/160 (38%), Gaps = 2/160 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID--QKISFVAS 61
           SF   L    A +  L+   DN++N+ T GF+  + +F+++  +    +        V  
Sbjct: 2   SFGTSLTGLNAAQSELNITGDNIANSSTWGFKESRPEFADLFASSNLGVTGLAIGQGVRL 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
                    G F  T   LD  + G  +F L     I  TR G F++  +G + +++GK 
Sbjct: 62  QNVGQQFSQGQFDFTENSLDLGISGKGFFRLSDDGDISYTRSGAFQLDREGWITNSAGKR 121

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLY 161
                A     I    +     E G ++ +    A +   
Sbjct: 122 LTGFAADGDGNIVGDGQQELRVETGNVAPEATTEARIQAN 161



 Score = 83.4 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 26/215 (12%), Positives = 65/215 (30%), Gaps = 16/215 (7%)

Query: 39  VKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98
             F + +G         I    +     ++  G  ++ G     +   +      +    
Sbjct: 216 TTFFDSLGRQHTANFYFIKGNDNDWYVHTEVDGEVLNNGQPQPISFGPNGLIEGNATFD- 274

Query: 99  ILTRDGRFKVTDDGSL----VSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-----EIS 149
             TR        D  L    ++  G    +   +       +    +V E G       +
Sbjct: 275 -YTRALADAEDLDFELDLESLTQFGTPFAVSDITQDGFAAGEFSSLDVSEDGTIFARFTN 333

Query: 150 QKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNA 204
            + +V+  +G+      +      ++              +  T     ++ G LE SN 
Sbjct: 334 GQSEVLGRVGVTKFPSQENLQPVGDTEWVATFEAGEPVVGTAGTSDFGSIESGALEQSNV 393

Query: 205 NSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +   ++ +MI   + F++   +I   ++   E + 
Sbjct: 394 DISEQLVKMIVAQRNFSANAKMISTEDQITQEILN 428


>gi|330961197|gb|EGH61457.1| flagellar hook protein FlgE [Pseudomonas syringae pv. maculicola
           str. ES4326]
          Length = 582

 Score = 88.8 bits (218), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 3/133 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV--GAIKNDIDQKISFVAS 61
           SFN  ++   A  +RL    +N++N  T+GF++ + +FS +     +    +     V  
Sbjct: 2   SFNTAISGIHAANKRLEVAGNNIANVGTLGFKSSRAQFSALYASAQLGAGGNAVGDGVRL 61

Query: 62  GKEYLSKEVGSF-ISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
                +   G   IS+G  LD  ++G+ +F +     +  TR G F    +  +V + G 
Sbjct: 62  ASVQQNFNQGETVISSGNPLDMRIQGNGFFVVSDQGALAYTRAGAFLKDAENFVVDSDGG 121

Query: 121 YPVLDMASVPIQI 133
                 AS   +I
Sbjct: 122 RLQGYAASDRGEI 134



 Score = 71.8 bits (174), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 32/99 (32%), Gaps = 5/99 (5%)

Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLE 200
           G  +   K I  + L S     G   R ++  +        E       +  ++  G LE
Sbjct: 482 GFTNGMTKDIGQVVLASFANPHGLQPRSDTRWTATADSGVAEYDRPGVGTLGSIVSGGLE 541

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            SN     E+  +I     + + +  I      M   I+
Sbjct: 542 GSNVVLADELIALIQAQTAYQANSKAISTEVTLMQTLIQ 580


>gi|28869141|ref|NP_791760.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|28852381|gb|AAO55455.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tomato str.
           DC3000]
          Length = 586

 Score = 88.8 bits (218), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 57/134 (42%), Gaps = 3/134 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG- 62
           SFN  ++   A  +RL    +N++N+ T+GF++ + +FS +  + +    +         
Sbjct: 2   SFNTAISGINAANKRLEVAGNNIANSGTIGFKSSRAQFSALYSSAQLGSGRNAIGDGVRL 61

Query: 63  --KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
              +    +  S  ++G  LD  ++G+ +F +     +  TR G F       +V + G 
Sbjct: 62  AATQQNFNQGDSMTTSGNPLDMRIQGNGFFVVSDKGSLAYTRAGAFLKDAANFVVDSEGG 121

Query: 121 YPVLDMASVPIQIP 134
                 A+   +I 
Sbjct: 122 RLQGYAANDNGEIM 135



 Score = 70.3 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 34/99 (34%), Gaps = 5/99 (5%)

Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLE 200
           G  +   K I  + L S    QG   R ++  + +      +       +  ++  G LE
Sbjct: 486 GFTNGMNKNIGQVILASFANPQGLQARSDTRWTESAESGVADYEVPGVGTLGSLVGGALE 545

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            SN     E+  +I     + + +  I      M   I+
Sbjct: 546 GSNVVLADELIALIQAQTAYQANSKAISTEATVMQTLIQ 584


>gi|331005445|ref|ZP_08328824.1| Flagellar hook protein FlgE [gamma proteobacterium IMCC1989]
 gi|330420721|gb|EGG95008.1| Flagellar hook protein FlgE [gamma proteobacterium IMCC1989]
          Length = 400

 Score = 88.8 bits (218), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 31/123 (25%), Positives = 51/123 (41%), Gaps = 8/123 (6%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--------DQ 54
           ++        L   + LSTV++N++N +T GF+   + F ++    +            Q
Sbjct: 4   STIYTASTGMLTFSKGLSTVSNNVANLNTPGFKRSDLLFRDLFYQFQQSGEMDGQTSAQQ 63

Query: 55  KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSL 114
             + V       S   G    TG   D A+ G+ +F L  P   + TR G+F+   DG L
Sbjct: 64  NGAGVTDAGTITSFAAGDIQQTGNSTDVAISGNGFFILREPDQQMYTRAGQFEFDSDGFL 123

Query: 115 VSA 117
            S 
Sbjct: 124 SST 126



 Score = 56.8 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 8/49 (16%), Positives = 21/49 (42%)

Query: 191 GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              +  G +E SN     E   +I + + F + + ++  + + + E + 
Sbjct: 347 FGDLVGGSIEISNVELTQEFTDLIIIQRGFQASSQIMSASNEMIQELLS 395


>gi|116250500|ref|YP_766338.1| flagellar hook protein FlgE [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115255148|emb|CAK06222.1| flagellar hook protein (agr_c_1012p) [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 433

 Score = 88.8 bits (218), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 38/163 (23%), Positives = 65/163 (39%), Gaps = 2/163 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           S    ++   A   RLSTVADN++N +T G++ +   FS +V       +     V +  
Sbjct: 6   SMKTAVSGMNAQANRLSTVADNIANVNTTGYKAVSTSFSSLVLPSSGG-NYNSGGVQTSV 64

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGKYP 122
                + G    T +  D A+ GD +F ++   G  +LTR G F   D+G+LV+A+G   
Sbjct: 65  RQAVSDQGDISYTTSSTDLAISGDGFFIVQGADGTPVLTRAGDFTKDDEGNLVNAAGFQL 124

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +             +    +       +    IA+        
Sbjct: 125 MGYSYDAGSPAVVVNGFDGLVPVNVNQEGLTAIASTSGVFKGN 167



 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 16/121 (13%), Positives = 35/121 (28%), Gaps = 1/121 (0%)

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178
                  +  V +               +   +  +        + +  G V   N    
Sbjct: 311 NGQAASPVKDVTVDGDGIVYAKYEDGSTKPLYRIPLANVASPDKLTLMSGNVYSANGQSG 370

Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
             +   P  +    T+K G LE SN +   E+ +MI   + + + + +       M   +
Sbjct: 371 VTVTGFPQTNG-LGTIKAGALEGSNVDLAGELTEMIESQRSYTANSKVFQTGSDIMDVLV 429

Query: 239 R 239
            
Sbjct: 430 N 430


>gi|330892783|gb|EGH25444.1| flagellar hook protein FlgE [Pseudomonas syringae pv. mori str.
           301020]
          Length = 280

 Score = 88.8 bits (218), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 58/133 (43%), Gaps = 3/133 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF---VA 60
           SFN  ++   A  +RL    +N++N+ T+GF++ + +FS +  A +    +         
Sbjct: 2   SFNTAISGIHAANKRLEVAGNNIANSGTIGFKSSRAQFSALYSASQLGSGRNAVGDGVCL 61

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           +  +    +  S  ++G  LD  ++G+ +F +     +  TR G F       +V + G 
Sbjct: 62  ASMQQNFNQGESMTTSGNPLDMRIQGNGFFVVSDGGSLAYTRAGAFLKDAANFVVDSEGG 121

Query: 121 YPVLDMASVPIQI 133
                 A+   +I
Sbjct: 122 RLQGYAANEQGEI 134


>gi|289679027|ref|ZP_06499917.1| flagellar hook protein FlgE [Pseudomonas syringae pv. syringae FF5]
          Length = 377

 Score = 88.8 bits (218), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 55/133 (41%), Gaps = 3/133 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SFN  ++   A  +RL    +N++N  T+GF++ + +FS +  + +    Q         
Sbjct: 2   SFNTAISGIHAANKRLEVAGNNIANVGTLGFKSSRAQFSALYASAQLGAGQHAVGDGVRL 61

Query: 64  EYLSKEVGSFI---STGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
             + +         S+G  LD  ++G+ +F +     +  TR G F       +V + G 
Sbjct: 62  ASVQQNFNQGETVISSGNALDMRIQGNGFFVVSDQGSLAYTRAGAFLKDAANFVVDSDGG 121

Query: 121 YPVLDMASVPIQI 133
                 A+   +I
Sbjct: 122 RLQGYAANDKGEI 134


>gi|260222467|emb|CBA32060.1| hypothetical protein Csp_D30230 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 188

 Score = 88.8 bits (218), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 37/171 (21%), Positives = 67/171 (39%), Gaps = 7/171 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID---QKISFVA 60
           SF  GL+   +  + L  + +N++N +TVG +  + +F+ ++                V+
Sbjct: 2   SFQTGLSGLNSSSKNLDVIGNNIANANTVGMKASRTEFAALIATQLGPAGGNLTPGIGVS 61

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLVSASG 119
            G        G+   TG  LD A+ G+ +F +  P      TRDG+FK+ D G+L++  G
Sbjct: 62  VGTVAQQFTQGNISITGNNLDVAINGNGFFQVTMPDQSRAYTRDGQFKLDDVGNLITNGG 121

Query: 120 KYPVL---DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
              +    D+      I  +  +              + A   L S     
Sbjct: 122 ANVMGYPTDLLGNRTSITPEKMVIPTNAPIPAEATTSIAAEFNLDSRTKPA 172


>gi|255023259|ref|ZP_05295245.1| flagellar basal body rod protein FlgG [Listeria monocytogenes FSL
           J1-208]
          Length = 251

 Score = 88.8 bits (218), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 39/243 (16%), Positives = 84/243 (34%), Gaps = 16/243 (6%)

Query: 10  AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV--------VGAIKNDIDQKISFVAS 61
           A  +   Q +   ++N++N  T GF+  ++    +         G +   +      V  
Sbjct: 1   AGMMNYMQHIQVHSNNVANAQTPGFKFDQLTSEVISRNKVNYQNGPVTRQVGTIDYGVRP 60

Query: 62  GKEYLSKEVGSFISTGTELDFALE------GDAWFALESPRGIILTRDGRFKVTDDGSLV 115
              +++   GS   T  + DF ++      G  +F       I L+R G+F     G L 
Sbjct: 61  AATHINLTAGSSYITNRDRDFFMQDTDPTQGSNFFITAKNGEISLSRGGQFHSDQFGFLR 120

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG--FVRRE 173
           +A G   +           +             ++  + +  +G   V  +Q    V+  
Sbjct: 121 TADGANLLSATGEAIQVGQKTSIRAEANGDLYNAETNQYLGRLGTKFVSANQADSLVKDG 180

Query: 174 NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
              +  N   T         ++ G +E SN +   EM Q++   +   +   +++  +K 
Sbjct: 181 EGRLHVNGINTMNLPAGQGIIQNGVIETSNVDLGVEMVQLMDNQRMVQASKNVVNMFDKV 240

Query: 234 MLE 236
             +
Sbjct: 241 YDK 243


>gi|220934394|ref|YP_002513293.1| flagellar basal body FlaE domain protein [Thioalkalivibrio sp.
           HL-EbGR7]
 gi|219995704|gb|ACL72306.1| flagellar basal body FlaE domain protein [Thioalkalivibrio sp.
           HL-EbGR7]
          Length = 408

 Score = 88.8 bits (218), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 51/125 (40%), Gaps = 2/125 (1%)

Query: 7   IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--ISFVASGKE 64
             L+   A    L    +N++N+ T GF+  + +F++V       I Q    + V     
Sbjct: 5   TALSGLNAASADLRVTGNNIANSGTTGFKQSRAEFADVFALSYGGISQTAIGTGVRLSAV 64

Query: 65  YLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVL 124
                 G+   TG  LD A+ G  +F L      + +R G F+V  +G +V+  G+   +
Sbjct: 65  TQQFSQGNIEFTGNNLDLAMNGQGFFVLNDSGTQVYSRAGAFQVNREGYVVNTQGQRLQV 124

Query: 125 DMASV 129
                
Sbjct: 125 YTPQN 129



 Score = 75.7 bits (184), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 26/211 (12%), Positives = 58/211 (27%), Gaps = 16/211 (7%)

Query: 34  FRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE 93
           FR       +   AI  ++      +    +       +             G     ++
Sbjct: 207 FRNTDTLQWDSYLAIDGNLAGGPLPLEFNSDGTLNTATTTTPLNFGTYALTNGADDLNID 266

Query: 94  SPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK 153
                     G F        V++  +          I I     +F     G+    G+
Sbjct: 267 FDLANATQYGGAFN-------VTSLSQNGFTTGRLNSIDIDPTGVVFARFTNGQSQALGR 319

Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLEDSNANSMY 208
           V     L +    QG  +  ++    +           +  +   ++ G LE SN +   
Sbjct: 320 V----ALANFANPQGLQQLGDNAWGESFAAGDVILGEADTGNFGLIQAGGLESSNVDIAE 375

Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           ++ ++I   + F +   +I   +      I 
Sbjct: 376 QLVKLITAQRNFQANAQVITTADAVTQTIIN 406


>gi|46906948|ref|YP_013337.1| flagellar hook protein FlgE [Listeria monocytogenes serotype 4b
           str. F2365]
 gi|47091659|ref|ZP_00229455.1| flagellar hook protein FlgE, putative [Listeria monocytogenes str.
           4b H7858]
 gi|217965205|ref|YP_002350883.1| flagellar hook protein [Listeria monocytogenes HCC23]
 gi|226223328|ref|YP_002757435.1| flagellar hook protein FlgE [Listeria monocytogenes Clip81459]
 gi|254824023|ref|ZP_05229024.1| flagellar hook protein FlgE [Listeria monocytogenes FSL J1-194]
 gi|254853099|ref|ZP_05242447.1| flagellar hook protein FlgE [Listeria monocytogenes FSL R2-503]
 gi|254932023|ref|ZP_05265382.1| flagellar hook protein FlgE [Listeria monocytogenes HPB2262]
 gi|300764509|ref|ZP_07074502.1| flagellar hook protein FlgE [Listeria monocytogenes FSL N1-017]
 gi|46880214|gb|AAT03514.1| putative flagellar hook protein FlgE [Listeria monocytogenes
           serotype 4b str. F2365]
 gi|47019978|gb|EAL10715.1| flagellar hook protein FlgE, putative [Listeria monocytogenes str.
           4b H7858]
 gi|217334475|gb|ACK40269.1| flagellar hook protein [Listeria monocytogenes HCC23]
 gi|225875790|emb|CAS04493.1| Putative flagellar hook protein FlgE [Listeria monocytogenes
           serotype 4b str. CLIP 80459]
 gi|258606448|gb|EEW19056.1| flagellar hook protein FlgE [Listeria monocytogenes FSL R2-503]
 gi|293583575|gb|EFF95607.1| flagellar hook protein FlgE [Listeria monocytogenes HPB2262]
 gi|293593251|gb|EFG01012.1| flagellar hook protein FlgE [Listeria monocytogenes FSL J1-194]
 gi|300514863|gb|EFK41917.1| flagellar hook protein FlgE [Listeria monocytogenes FSL N1-017]
 gi|307570236|emb|CAR83415.1| flagellar hook protein [Listeria monocytogenes L99]
 gi|332311122|gb|EGJ24217.1| Flagellar hook protein FlgE [Listeria monocytogenes str. Scott A]
          Length = 411

 Score = 88.8 bits (218), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 64/181 (35%), Gaps = 13/181 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    ++   A +Q LS  ++N++N +T G++   V F++++            +  
Sbjct: 1   MNQTMYTAISGMNAFQQALSVTSNNIANANTTGYKKQSVVFNDLLYQNTMGSVAGGLYAG 60

Query: 61  SGKEYL-----------SKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107
           +                    GS  +TG   D AL+G  +F     +   I+ TRDG F 
Sbjct: 61  TNPMSFGSGSKIGAILTDYTAGSPTATGRNKDAALQGRGFFIAGDNAGGNIVYTRDGSFA 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           V+D+  L +  GKY +         +   +                        ++ +  
Sbjct: 121 VSDNNYLTTQQGKYVMGYATDKNGNVLNGNLQPIQIPLNSAIPGEATKNGSLSGNIPLDW 180

Query: 168 G 168
           G
Sbjct: 181 G 181



 Score = 64.5 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 17/125 (13%), Positives = 31/125 (24%), Gaps = 5/125 (4%)

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
           P  D                             +A + + +     G V+  N    P +
Sbjct: 286 PTSDGKGAATVKDYAVTDSGYIAVSYSDGTVIPVAQLAVATFSNEDGLVKMGNGEYVPGL 345

Query: 182 PPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                            +    LE SN +   E   ++     F   T +I   +  M +
Sbjct: 346 SSGDAVYGVAGQNGAGGISGSSLEGSNVDLSREFVNLMTYQSGFQGNTKVIRVADDVMKQ 405

Query: 237 AIRNI 241
            +  I
Sbjct: 406 IVNLI 410


>gi|290893994|ref|ZP_06556969.1| flagellar hook protein FlgE [Listeria monocytogenes FSL J2-071]
 gi|290556440|gb|EFD89979.1| flagellar hook protein FlgE [Listeria monocytogenes FSL J2-071]
          Length = 411

 Score = 88.8 bits (218), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 64/181 (35%), Gaps = 13/181 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    ++   A +Q LS  ++N++N +T G++   V F++++            +  
Sbjct: 1   MNQTMYTAISGMNAFQQALSVTSNNIANANTTGYKKQSVVFNDLLYQNTMGSVAGGLYAG 60

Query: 61  SGKEYL-----------SKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107
           +                    GS  +TG   D AL+G  +F     +   I+ TRDG F 
Sbjct: 61  TNPMSFGSGSKIGAILTDYTAGSPTATGRNKDAALQGRGFFIAGDNAGGNIVYTRDGSFA 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           V+D+  L +  GKY +         +   +                        ++ +  
Sbjct: 121 VSDNNYLTTQQGKYVMGYATDKNGNVLNGNLQPIQIPLNSAIPGEATKNGSLSGNIPLDW 180

Query: 168 G 168
           G
Sbjct: 181 G 181



 Score = 64.5 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 17/125 (13%), Positives = 31/125 (24%), Gaps = 5/125 (4%)

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
           P  D                             +A + + +     G V+  N    P +
Sbjct: 286 PTSDGKGAATVKDYAVTDAGYIAVSYSDGTVIPVAQLAVATFSNEDGLVKMGNGEYVPGL 345

Query: 182 PPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                            +    LE SN +   E   ++     F   T +I   +  M +
Sbjct: 346 SSGDAVYGVAGQNGAGGISGSSLEGSNVDLSREFVNLMTYQSGFQGNTKVIRVADDVMKQ 405

Query: 237 AIRNI 241
            +  I
Sbjct: 406 IVNLI 410


>gi|225628428|ref|ZP_03786462.1| flagellar hook protein FlgE [Brucella ceti str. Cudo]
 gi|225616274|gb|EEH13322.1| flagellar hook protein FlgE [Brucella ceti str. Cudo]
          Length = 456

 Score = 88.8 bits (218), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 5/123 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M      G++   A   RLSTVADN++N  TVG++  + +FS +V           S V 
Sbjct: 66  MMR---TGVSGMNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAGQYNSGS-VL 121

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASG 119
           +   Y   + G   ST +  D A++G+ +F ++ P G    TR G F    +G LV+++G
Sbjct: 122 TDVRYGISDQGGIRSTSSTTDLAIDGNGYFVVQGPGGSTYLTRAGSFVPDKNGDLVNSAG 181

Query: 120 KYP 122
            Y 
Sbjct: 182 YYL 184



 Score = 70.3 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 22/54 (40%)

Query: 186 LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +      +  G LE+SNA+   E+  MI   + + + + +     + M   + 
Sbjct: 400 PQGDGMGKIMSGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGSELMDVLVN 453


>gi|297580843|ref|ZP_06942768.1| flagellar hook protein FlgE [Vibrio cholerae RC385]
 gi|297534669|gb|EFH73505.1| flagellar hook protein FlgE [Vibrio cholerae RC385]
          Length = 434

 Score = 88.8 bits (218), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 70/207 (33%), Gaps = 13/207 (6%)

Query: 6   NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGK 63
            + L+   A +  L+T ++N++N +T GF+  + +F +V       N        V + K
Sbjct: 3   YVSLSGLSAAQMDLNTTSNNIANANTFGFKESRAEFGDVYSTSLFTNAKTTPGQGVQAAK 62

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWF----ALESPRGIILTRDGRFKVTDDGSLVSASG 119
                  GS I T   LD  + G  +F        P+   LTR+G F +  +  +V+A+ 
Sbjct: 63  VAQQFHEGSSIYTNNPLDLRIAGTGFFAVAKDRLVPQQNELTRNGAFHLDKNSFMVTAND 122

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF-------VRR 172
           ++ +    +         E   +    +  +  +        ++  +          +  
Sbjct: 123 EFLLGYEVNPDTGDVLSYEPKPINIPPQFGKPKQTANIDLGANLPANGDLKDPALFDITD 182

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFL 199
             +                  +   +L
Sbjct: 183 PETYNRTTSSTIYDSMGQPYKLTTYYL 209



 Score = 65.3 bits (157), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 15/122 (12%), Positives = 36/122 (29%), Gaps = 5/122 (4%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI- 181
             D A+         +          +     +  + L  V   QG  ++  +       
Sbjct: 311 DQDGATTGFLTKIDFDENGSVLATYSNGINTTLGRVALVRVANEQGLDKKGGTQWDATQF 370

Query: 182 ----PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                       S  ++  G LE SN +   E+  +I   + F + +  ++ +       
Sbjct: 371 SGAKIWGESNKGSFGSISNGSLEQSNIDMTQELVDLISAQRNFQANSRALEVHNGLQQNI 430

Query: 238 IR 239
           ++
Sbjct: 431 LQ 432


>gi|301053310|ref|YP_003791521.1| flagellar basal-body rod protein [Bacillus anthracis CI]
 gi|300375479|gb|ADK04383.1| flagellar basal-body rod protein [Bacillus cereus biovar anthracis
           str. CI]
          Length = 243

 Score = 88.8 bits (218), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 42/241 (17%), Positives = 83/241 (34%), Gaps = 15/241 (6%)

Query: 16  EQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DIDQKISFVASGKEYLS 67
            QR++  ++N++N  T GF+   +        +          +I      V     +++
Sbjct: 1   MQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIGSVDYAVVPAATHVN 60

Query: 68  KEVGSFISTGTELDFALEGDA-----WFALESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
              G+   T +  DF L+        +F         LTRDG F +  D  L + SG + 
Sbjct: 61  LVQGNIQMTNSATDFFLDDGTAGTASFFVTSKNNETFLTRDGSFTLNSDRYLQTTSGAFV 120

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV--DMSQGFVRRENSGISPN 180
           + +                       +     IA +   +V  + +   ++REN   +  
Sbjct: 121 MGENNERIRIPEGAKVAVQADGTLYDAVTQNNIARLQTKTVGAEANNRLMQRENKSFTLA 180

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
                       TVK   LE+SN +   EM  ++   +  ++   ++   +K   +    
Sbjct: 181 EGNIADLPNGVGTVKNYMLENSNVDMTKEMADLMTDQKMISASQRVMTSFDKIYEKEANE 240

Query: 241 I 241
           I
Sbjct: 241 I 241


>gi|229524192|ref|ZP_04413597.1| flagellar hook protein FlgE [Vibrio cholerae bv. albensis VL426]
 gi|229337773|gb|EEO02790.1| flagellar hook protein FlgE [Vibrio cholerae bv. albensis VL426]
          Length = 434

 Score = 88.8 bits (218), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 70/207 (33%), Gaps = 13/207 (6%)

Query: 6   NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGK 63
            + L+   A +  L+T ++N++N +T GF+  + +F +V       N        V + K
Sbjct: 3   YVSLSGLSAAQMDLNTTSNNIANANTFGFKESRAEFGDVYSTSLFTNAKTTPGQGVQAAK 62

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWF----ALESPRGIILTRDGRFKVTDDGSLVSASG 119
                  GS I T   LD  + G  +F        P+   LTR+G F +  +  +V+A+ 
Sbjct: 63  VAQQFHEGSSIYTNNPLDLRIAGTGFFAVAKDRLVPQQNELTRNGAFHLDKNSFMVTAND 122

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF-------VRR 172
           ++ +    +         E   +    +  +  +        ++  +          +  
Sbjct: 123 EFLLGYEVNPDTGDVLSYEPKPINIPPQFGKPKQTANIDLGANLPANGDLKDPTLFDITD 182

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFL 199
             +                  +   +L
Sbjct: 183 PETYNRTTSSTIYDSMGQPYKLTTYYL 209



 Score = 65.3 bits (157), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 15/122 (12%), Positives = 36/122 (29%), Gaps = 5/122 (4%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI- 181
             D A+         +          +     +  + L  V   QG  ++  +       
Sbjct: 311 DQDGATTGFLTKIDFDENGSVLATYSNGINTTLGRVALVRVANEQGLDKKGGTQWDATQF 370

Query: 182 ----PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                       S  ++  G LE SN +   E+  +I   + F + +  ++ +       
Sbjct: 371 SGAKIWGESNKGSFGSISNGSLEQSNIDMTQELVDLISAQRNFQANSRALEVHNGLQQNI 430

Query: 238 IR 239
           ++
Sbjct: 431 LQ 432


>gi|91792664|ref|YP_562315.1| flagellar hook protein FlgE [Shewanella denitrificans OS217]
 gi|91714666|gb|ABE54592.1| protein of unknown function DUF1078-like protein [Shewanella
           denitrificans OS217]
          Length = 455

 Score = 88.8 bits (218), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 70/185 (37%), Gaps = 6/185 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61
           SFNI L+   A ++ L+T A+N++N +T+GF+  + +F++V       N        V +
Sbjct: 2   SFNIALSGIAAAQKDLNTTANNIANVNTIGFKESRAEFADVYANSIFSNGKTAVGGGVTT 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI----ILTRDGRFKVTDDGSLVSA 117
            +       GS   T   LD A+ G  +F   +          +R G FKV  +  +V +
Sbjct: 62  TQVAQQFSQGSLQFTSNALDLAISGGGFFVTSANIDTSQDQSFSRAGAFKVDSNNYMVDS 121

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177
           +G +                       K   +    V  +     ++++ G    + +  
Sbjct: 122 AGNFLQAFPVDETGSSTSVSLTTTKPVKIPDTAGSPVKTSSIGMQMNLNSGDKVLDPAAF 181

Query: 178 SPNIP 182
            P   
Sbjct: 182 DPTDS 186



 Score = 69.9 bits (169), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 34/91 (37%), Gaps = 5/91 (5%)

Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMY 208
            +A + L      QG  +  N+    ++   P         +  +++   LE SN +   
Sbjct: 363 PLARVALVRFANEQGLTQVGNTSWKASLDSGPALAGEANSGTFGSIRSSALEQSNVDLTT 422

Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           E+  +I   + F + +  ++ N       ++
Sbjct: 423 ELVDLISAQRNFQANSRTLEVNNTLQQTILQ 453


>gi|254785371|ref|YP_003072800.1| flagellar basal body protein FlgE [Teredinibacter turnerae T7901]
 gi|237685119|gb|ACR12383.1| Flagellar basal body protein FlgE [Teredinibacter turnerae T7901]
          Length = 813

 Score = 88.8 bits (218), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 59/153 (38%), Gaps = 2/153 (1%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASG 62
           FN  L+   A    L+   +N++N  T+GF+  + +F +V          +   S V   
Sbjct: 3   FNTALSGIRAASTDLTVTGNNIANASTIGFKRSRAEFGDVFATSVLGAGANAIGSGVQVE 62

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
               + + G+   T  ELD A+ G+ +F L      + +R G F + D G + +  G   
Sbjct: 63  DVAQNFKQGNVAFTQNELDLAINGNGFFVLSDQGTPVYSRAGTFGLDDQGYVTNNVGARL 122

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI 155
               A     I    +   +       ++  ++
Sbjct: 123 QGFQADSTGNISGISDDILIQTSNLPPRQTTLV 155



 Score = 82.6 bits (202), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 59/206 (28%), Gaps = 9/206 (4%)

Query: 39  VKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98
             F+          +     +      +  + G+        +    G            
Sbjct: 610 ASFNVFFNENGTLNELLTEDMLISNWVVLDQQGNPTGAMGPQNVLAGGSIVIPEPPTSSN 669

Query: 99  ILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158
            +        +     V  + +          + I +   IF     GE    G+ +A +
Sbjct: 670 FVIELAGTSQSGTDFSVDDTDQDGYASGRLSGLAIDENGVIFARYTNGE----GQPLAQV 725

Query: 159 GLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQM 213
            L      QG     N+  + +    P      +  +   ++ G LE+SN +   E+ ++
Sbjct: 726 ALADFTNQQGLQPIGNTMWAESFASGPPNVGTPQSGALGAIQSGALEESNVDLSEELVRL 785

Query: 214 IHLTQKFNSITTLIDENEKSMLEAIR 239
           I   + F +    I+  ++     I 
Sbjct: 786 IIAQRNFQASAKTIETADQVTQTIIN 811


>gi|315122284|ref|YP_004062773.1| flagellar hook protein FlgE [Candidatus Liberibacter solanacearum
           CLso-ZC1]
 gi|313495686|gb|ADR52285.1| flagellar hook protein FlgE [Candidatus Liberibacter solanacearum
           CLso-ZC1]
          Length = 422

 Score = 88.8 bits (218), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 65/162 (40%), Gaps = 2/162 (1%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
               ++   A   R+S V+DN++N +T+G++   V FS +V             VA  ++
Sbjct: 7   MKTAMSGMDAQSNRVSAVSDNIANVNTIGYKRTAVSFSSLVFPPAAGCHTSG-GVAVSEK 65

Query: 65  YLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASGKYPV 123
            +    GS I T +  D A++G+ +F ++   G    TR G F++ ++G L + +G    
Sbjct: 66  DMISSQGSLIHTASNTDLAIQGEGFFVVKDKTGTHYLTRSGNFQINNEGFLQNTAGYVLQ 125

Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
                        +    +      + + + + T        
Sbjct: 126 GYPMRNAFSPLVLNSFQGLETINVRNFEPRAVPTTLGSIPAN 167



 Score = 66.0 bits (159), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 11/91 (12%), Positives = 28/91 (30%), Gaps = 5/91 (5%)

Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMY 208
            +  + + +V         + +   P      +            V  G LE +N +   
Sbjct: 329 PVYRLAIATVPSENSLKICDGNTYLPTRDSGDISIGYPGNDQRGDVLSGALETANVDIAN 388

Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           E+ ++I   + + + + +       M   I 
Sbjct: 389 ELTELIEAQRNYAANSKVFQTGSDFMDILIS 419


>gi|255521910|ref|ZP_05389147.1| flagellar hook protein FlgE [Listeria monocytogenes FSL J1-175]
          Length = 411

 Score = 88.8 bits (218), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 66/189 (34%), Gaps = 13/189 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    ++   A +Q LS  ++N++N +T G++   V F++++            +  
Sbjct: 1   MNQTMYTAISGMNAFQQALSVTSNNIANANTTGYKKQSVVFNDLLYQNTMGSVAGGLYAG 60

Query: 61  SGKEYL-----------SKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107
           +                    GS  +TG   D AL+G  +F     +   I+ TRDG F 
Sbjct: 61  TNPMSFGSGSKIGAILTDYTAGSPTATGRNKDAALQGRGFFIAGDNAGGNIVYTRDGSFA 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           V+D+  L +  GKY +         +   +                        ++ +  
Sbjct: 121 VSDNNYLTTQQGKYVMGYATDKNGNVLNGNLQPIQIPLNSAIPGEATKNGSLSGNIPLDW 180

Query: 168 GFVRRENSG 176
           G     +S 
Sbjct: 181 GEKDTISSA 189



 Score = 64.5 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 17/125 (13%), Positives = 31/125 (24%), Gaps = 5/125 (4%)

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
           P  D                             +A + + +     G V+  N    P +
Sbjct: 286 PTSDGKGAATVKDYAVTDSGYIAVSYSDGTVIPVAQLAVATFSNEDGLVKMGNGEYVPGL 345

Query: 182 PPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                            +    LE SN +   E   ++     F   T +I   +  M +
Sbjct: 346 SSGDAVYGVAGQNGAGGISGSSLEGSNVDLSREFVNLMTYQSGFQGNTKVIRVADDVMKQ 405

Query: 237 AIRNI 241
            +  I
Sbjct: 406 IVNLI 410


>gi|261211322|ref|ZP_05925610.1| flagellar hook protein FlgE [Vibrio sp. RC341]
 gi|260839277|gb|EEX65903.1| flagellar hook protein FlgE [Vibrio sp. RC341]
          Length = 434

 Score = 88.8 bits (218), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 70/207 (33%), Gaps = 13/207 (6%)

Query: 6   NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGK 63
            + L+   A +  L+T ++N++N +T GF+  + +F +V       N        V + K
Sbjct: 3   YVSLSGLSAAQMDLNTTSNNIANANTFGFKESRAEFGDVYSTSLFTNAKTTPGQGVQAAK 62

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWF----ALESPRGIILTRDGRFKVTDDGSLVSASG 119
                  GS I T   LD  + G  +F        P+   LTR+G F +  +  +V+A+ 
Sbjct: 63  VAQQFHEGSSIYTNNPLDLRIAGTGFFAVAKDRLVPQQNELTRNGAFHLDKNSFMVTAND 122

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF-------VRR 172
           ++ +    +         E   +    +  +  +        ++  +          +  
Sbjct: 123 EFLLGYEVNPDTGDVLSYEPKPINIPPQFGKPKQTANIELGANLPANGDLKDPALFDITD 182

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFL 199
             +                  +   +L
Sbjct: 183 PETYNRTTSSTIYDSMGQPYKLTTYYL 209



 Score = 65.3 bits (157), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 15/122 (12%), Positives = 36/122 (29%), Gaps = 5/122 (4%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI- 181
             D A+         +          +     +  + L  V   QG  ++  +       
Sbjct: 311 DQDGATTGFLTKIDFDENGSVLATYSNGINTTLGRVALVRVANEQGLDKKGGTQWDATQF 370

Query: 182 ----PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                       S  ++  G LE SN +   E+  +I   + F + +  ++ +       
Sbjct: 371 SGAKIWGESNKGSFGSISNGSLEQSNIDMTQELVDLISAQRNFQANSRALEVHNGLQQNI 430

Query: 238 IR 239
           ++
Sbjct: 431 LQ 432


>gi|15642196|ref|NP_231828.1| flagellar hook protein FlgE [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121586263|ref|ZP_01676053.1| flagellar hook protein FlgE [Vibrio cholerae 2740-80]
 gi|121726540|ref|ZP_01679789.1| flagellar hook protein FlgE [Vibrio cholerae V52]
 gi|147674037|ref|YP_001217714.1| flagellar hook protein FlgE [Vibrio cholerae O395]
 gi|153213649|ref|ZP_01948922.1| flagellar hook protein FlgE [Vibrio cholerae 1587]
 gi|153817107|ref|ZP_01969774.1| flagellar hook protein FlgE [Vibrio cholerae NCTC 8457]
 gi|153820826|ref|ZP_01973493.1| flagellar hook protein FlgE [Vibrio cholerae B33]
 gi|153825324|ref|ZP_01977991.1| flagellar hook protein FlgE [Vibrio cholerae MZO-2]
 gi|153829329|ref|ZP_01981996.1| flagellar hook protein FlgE [Vibrio cholerae 623-39]
 gi|183179565|ref|ZP_02957776.1| flagellar hook protein FlgE [Vibrio cholerae MZO-3]
 gi|227082321|ref|YP_002810872.1| flagellar hook protein FlgE [Vibrio cholerae M66-2]
 gi|229507726|ref|ZP_04397231.1| flagellar hook protein FlgE [Vibrio cholerae BX 330286]
 gi|229512079|ref|ZP_04401558.1| flagellar hook protein FlgE [Vibrio cholerae B33]
 gi|229513841|ref|ZP_04403303.1| flagellar hook protein FlgE [Vibrio cholerae TMA 21]
 gi|229519215|ref|ZP_04408658.1| flagellar hook protein FlgE [Vibrio cholerae RC9]
 gi|229522146|ref|ZP_04411563.1| flagellar hook protein FlgE [Vibrio cholerae TM 11079-80]
 gi|229528798|ref|ZP_04418188.1| flagellar hook protein FlgE [Vibrio cholerae 12129(1)]
 gi|229607230|ref|YP_002877878.1| flagellar hook protein FlgE [Vibrio cholerae MJ-1236]
 gi|254225801|ref|ZP_04919406.1| flagellar hook protein FlgE [Vibrio cholerae V51]
 gi|254849326|ref|ZP_05238676.1| flagellar hook protein FlgE [Vibrio cholerae MO10]
 gi|255747104|ref|ZP_05421049.1| flagellar hook protein FlgE [Vibrio cholera CIRS 101]
 gi|262161352|ref|ZP_06030462.1| flagellar hook protein FlgE [Vibrio cholerae INDRE 91/1]
 gi|262167777|ref|ZP_06035479.1| flagellar hook protein FlgE [Vibrio cholerae RC27]
 gi|262191689|ref|ZP_06049865.1| flagellar hook protein FlgE [Vibrio cholerae CT 5369-93]
 gi|298500425|ref|ZP_07010230.1| flagellar hook protein FlgE [Vibrio cholerae MAK 757]
 gi|9656753|gb|AAF95342.1| flagellar hook protein FlgE [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121549529|gb|EAX59555.1| flagellar hook protein FlgE [Vibrio cholerae 2740-80]
 gi|121630993|gb|EAX63372.1| flagellar hook protein FlgE [Vibrio cholerae V52]
 gi|124115848|gb|EAY34668.1| flagellar hook protein FlgE [Vibrio cholerae 1587]
 gi|125621707|gb|EAZ50036.1| flagellar hook protein FlgE [Vibrio cholerae V51]
 gi|126512375|gb|EAZ74969.1| flagellar hook protein FlgE [Vibrio cholerae NCTC 8457]
 gi|126521618|gb|EAZ78841.1| flagellar hook protein FlgE [Vibrio cholerae B33]
 gi|146315920|gb|ABQ20459.1| flagellar hook protein FlgE [Vibrio cholerae O395]
 gi|148875170|gb|EDL73305.1| flagellar hook protein FlgE [Vibrio cholerae 623-39]
 gi|149741008|gb|EDM55077.1| flagellar hook protein FlgE [Vibrio cholerae MZO-2]
 gi|183012976|gb|EDT88276.1| flagellar hook protein FlgE [Vibrio cholerae MZO-3]
 gi|227010209|gb|ACP06421.1| flagellar hook protein FlgE [Vibrio cholerae M66-2]
 gi|227014093|gb|ACP10303.1| flagellar hook protein FlgE [Vibrio cholerae O395]
 gi|229332572|gb|EEN98058.1| flagellar hook protein FlgE [Vibrio cholerae 12129(1)]
 gi|229341071|gb|EEO06076.1| flagellar hook protein FlgE [Vibrio cholerae TM 11079-80]
 gi|229343904|gb|EEO08879.1| flagellar hook protein FlgE [Vibrio cholerae RC9]
 gi|229349022|gb|EEO13979.1| flagellar hook protein FlgE [Vibrio cholerae TMA 21]
 gi|229352044|gb|EEO16985.1| flagellar hook protein FlgE [Vibrio cholerae B33]
 gi|229355231|gb|EEO20152.1| flagellar hook protein FlgE [Vibrio cholerae BX 330286]
 gi|229369885|gb|ACQ60308.1| flagellar hook protein FlgE [Vibrio cholerae MJ-1236]
 gi|254845031|gb|EET23445.1| flagellar hook protein FlgE [Vibrio cholerae MO10]
 gi|255735506|gb|EET90906.1| flagellar hook protein FlgE [Vibrio cholera CIRS 101]
 gi|262023842|gb|EEY42541.1| flagellar hook protein FlgE [Vibrio cholerae RC27]
 gi|262028663|gb|EEY47317.1| flagellar hook protein FlgE [Vibrio cholerae INDRE 91/1]
 gi|262032428|gb|EEY50990.1| flagellar hook protein FlgE [Vibrio cholerae CT 5369-93]
 gi|297541118|gb|EFH77172.1| flagellar hook protein FlgE [Vibrio cholerae MAK 757]
 gi|327484716|gb|AEA79123.1| Flagellar hook protein FlgE [Vibrio cholerae LMA3894-4]
          Length = 434

 Score = 88.8 bits (218), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 70/207 (33%), Gaps = 13/207 (6%)

Query: 6   NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGK 63
            + L+   A +  L+T ++N++N +T GF+  + +F +V       N        V + K
Sbjct: 3   YVSLSGLSAAQMDLNTTSNNIANANTFGFKESRAEFGDVYSTSLFTNAKTTPGQGVQAAK 62

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWF----ALESPRGIILTRDGRFKVTDDGSLVSASG 119
                  GS I T   LD  + G  +F        P+   LTR+G F +  +  +V+A+ 
Sbjct: 63  VAQQFHEGSSIYTNNPLDLRIAGTGFFAVAKDRLVPQQNELTRNGAFHLDKNSFMVTAND 122

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF-------VRR 172
           ++ +    +         E   +    +  +  +        ++  +          +  
Sbjct: 123 EFLLGYEVNPDTGDVLSYEPKPINIPPQFGKPKQTANIDLGANLPANGDLKDPALFDITD 182

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFL 199
             +                  +   +L
Sbjct: 183 PETYNRTTSSTIYDSMGQPYKLTTYYL 209



 Score = 65.3 bits (157), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 15/122 (12%), Positives = 36/122 (29%), Gaps = 5/122 (4%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI- 181
             D A+         +          +     +  + L  V   QG  ++  +       
Sbjct: 311 DQDGATTGFLTKIDFDENGSVLATYSNGINTTLGRVALVRVANEQGLDKKGGTQWDATQF 370

Query: 182 ----PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                       S  ++  G LE SN +   E+  +I   + F + +  ++ +       
Sbjct: 371 SGAKIWGESNKGSFGSISNGSLEQSNIDMTQELVDLISAQRNFQANSRALEVHNGLQQNI 430

Query: 238 IR 239
           ++
Sbjct: 431 LQ 432


>gi|168703389|ref|ZP_02735666.1| hypothetical protein GobsU_27906 [Gemmata obscuriglobus UQM 2246]
          Length = 430

 Score = 88.8 bits (218), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 62/207 (29%), Gaps = 15/207 (7%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----------- 50
             +  +G +        L  + +N++N +T G++  ++ F +VV    +           
Sbjct: 3   LNALFVGSSGLTTNSSALDVIGNNLANINTTGYKDQRMVFRDVVYQTLSSGTSADAGTGG 62

Query: 51  -DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109
            +  Q    V  G        G+   TG  LD  L+G  +F + +   +  TR G F V 
Sbjct: 63  VNPTQVGFGVGVGSIGTQFTQGNLNPTGRSLDVGLQGRGFFVMRNVEDVAYTRAGAFGVD 122

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGE---ISQKGKVIATMGLYSVDMS 166
             G LV     + V     V                G        G   A +   ++D  
Sbjct: 123 SAGYLVDPGTGFRVQRFGPVGEGGASNAGDPQFQIPGNLDIQIPFGTGAAGIATTNIDYQ 182

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVT 193
                    G          +  S   
Sbjct: 183 GNLSSAMQVGEVATTAIQVYDAQSTAR 209



 Score = 69.1 bits (167), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 18/159 (11%), Positives = 41/159 (25%), Gaps = 10/159 (6%)

Query: 94  SPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ--- 150
                  T           + ++  G                     ++   G +     
Sbjct: 272 PGINTAQTITLNLGTAGLTNGLTQFGGATTASAIGQDGSGFGTLTDVSIDADGIVQGKFT 331

Query: 151 --KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSN 203
             +   +A + +   +   G +R  N+    ++                ++  G LE SN
Sbjct: 332 NGRTINLAQLAVAGFNNEDGLLRSGNNYFRSSVASGEALIGLAGQGGRGSLMGGALESSN 391

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            +   E  ++I   + F      I     ++ E    I 
Sbjct: 392 VDIAIEFSRLIVAQRGFQVNARTISSTNDTLQELANIIR 430


>gi|313681188|ref|YP_004058926.1| flagellar hook protein flge [Sulfuricurvum kujiense DSM 16994]
 gi|313154048|gb|ADR32726.1| flagellar hook protein FlgE [Sulfuricurvum kujiense DSM 16994]
          Length = 758

 Score = 88.8 bits (218), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 53/141 (37%), Gaps = 14/141 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G+    A +  +   ++N++N +T+G++  +  FS+++               
Sbjct: 1   MLRSLFAGVTGLQAHQIAMDVESNNIANVNTIGYKYSRANFSDLLAQTSQIATAPQGDIG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGRF 106
             +  Q                GS  +T    D A++GD +F + S  G     +R G F
Sbjct: 61  GKNAVQVGLGTTISSVTRIMTQGSIQNTDKNTDVAIQGDGFFIVSSDAGSTYKYSRSGDF 120

Query: 107 KVTDDGSLVSASGKYPVLDMA 127
           K    G+ V  +G      + 
Sbjct: 121 KFDAAGNFVDNNGFVVQGWVR 141



 Score = 65.7 bits (158), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 14/128 (10%), Positives = 41/128 (32%), Gaps = 5/128 (3%)

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
           ++       D       +  + +          + +   +A MG+     ++G V    +
Sbjct: 627 TSGTSGISQDGFPGGDLVGIRIDQSGTLVGSFSNGRSFGLAQMGMAKFTNNEGLVSDGGN 686

Query: 176 GISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
               +         +  T     ++   LE SN +    + Q+I + + + +    I  +
Sbjct: 687 VYLQSANSGDPIIGTAATAGRGFMQSSSLEASNVDLSKSLTQLIIIQRGYQANGKTITTS 746

Query: 231 EKSMLEAI 238
           +  +   +
Sbjct: 747 DTLLETLL 754


>gi|257095359|ref|YP_003169000.1| hypothetical protein CAP2UW1_3821 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257047883|gb|ACV37071.1| protein of unknown function DUF1078 domain protein [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
          Length = 417

 Score = 88.8 bits (218), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 32/138 (23%), Positives = 54/138 (39%), Gaps = 2/138 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN--DIDQKISFVAS 61
           SF  GL+   A    L+ + +N++N  TVGF+     F++V  +        Q    V  
Sbjct: 2   SFQQGLSGLSAAATALNVIGNNVANASTVGFKGANAHFADVFASSLGIVGASQVGIGVGV 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
                    G+  +T   LD AL G  +F +     I  TR+G+F +  +G +++     
Sbjct: 62  SSIQQQFTQGNLTTTNNGLDLALNGGGFFRMSDDGAITYTRNGQFHIDKEGYVINDLNLR 121

Query: 122 PVLDMASVPIQIPQKDEI 139
                A     I     +
Sbjct: 122 LTGYPADALGAISPSSPV 139



 Score = 80.3 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 13/98 (13%), Positives = 35/98 (35%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLED 201
             + + + +  + L +     G     N+  S +    P    +  +     ++   +ED
Sbjct: 318 YSNGQTRNLGQVVLATFADPNGLKNLGNNQWSSSSASGPELVAAPGSGSRGVIQSSAIED 377

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E+  MI   + + +    I   ++ +   + 
Sbjct: 378 SNVDLTKELVDMITAQRNYQANAQTIKTQDQVLQTLVN 415


>gi|121997319|ref|YP_001002106.1| flagellar basal body FlaE domain-containing protein [Halorhodospira
           halophila SL1]
 gi|121588724|gb|ABM61304.1| flagellar basal body FlaE domain protein [Halorhodospira halophila
           SL1]
          Length = 418

 Score = 88.8 bits (218), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 2/123 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG- 62
           SFNI L    +  + L T ++N++N  T GF+  + +F+++       I Q      S  
Sbjct: 2   SFNISLTGINSASKDLETTSNNLANAGTTGFKESRAEFNDLFAMGPMGIPQLAVGQGSRL 61

Query: 63  -KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
                    GSF  T   LD  +EG  +F +E    +  TR G+F+V  DG +V+ +GK 
Sbjct: 62  ANVGQMFSQGSFDFTERSLDLGIEGRGFFRMEDDGEVSYTRAGQFEVDRDGYIVNNTGKR 121

Query: 122 PVL 124
              
Sbjct: 122 LTG 124



 Score = 70.3 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 18/142 (12%), Positives = 36/142 (25%), Gaps = 9/142 (6%)

Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162
            G          V+   +          I +     I      GE       +  + L S
Sbjct: 279 FGEMTQFARPFNVTNVSQDGYAAGEFENINVEGDGTILARYSNGEAQ----AVGQVALTS 334

Query: 163 VDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217
               +       +                       V+ G LE SN     ++  MI   
Sbjct: 335 FPSEEKLQSVGETSWQATRDAGDPLIGVPGQGQFGRVENGALEQSNVEVSDQLVNMITAQ 394

Query: 218 QKFNSITTLIDENEKSMLEAIR 239
           + F++   ++   ++   E + 
Sbjct: 395 RNFSANAQMVSTQDQVTQEILN 416


>gi|239815263|ref|YP_002944173.1| hypothetical protein Vapar_2278 [Variovorax paradoxus S110]
 gi|239801840|gb|ACS18907.1| protein of unknown function DUF1078 domain protein [Variovorax
           paradoxus S110]
          Length = 395

 Score = 88.8 bits (218), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 65/134 (48%), Gaps = 9/134 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN--------DI 52
           M  S  +G+   L   + L  +A+N +N +T GF++  ++F+++  +  N        + 
Sbjct: 1   MLESIYVGMTGLLGYSRGLRVIANNTANINTPGFKSSSLQFADMFYSGGNLGGGSTSQNR 60

Query: 53  DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDD 111
           DQ    +++    LS + G    TG +LD A++G   FAL+        TR G+FK   D
Sbjct: 61  DQVGFGLSTAGTSLSFKQGELRQTGNDLDMAVDGQGLFALQDANGKTTYTRAGQFKFDAD 120

Query: 112 GSLVSASGKYPVLD 125
           G+LVS      V+ 
Sbjct: 121 GTLVSRVNGEKVMG 134



 Score = 59.1 bits (141), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 12/118 (10%), Positives = 30/118 (25%), Gaps = 4/118 (3%)

Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183
            D            +          +      A + L   D         ++        
Sbjct: 272 QDGIGPGALSGTTFDADGNLTLNYSNGSTVKGARLALARFDSPDAVGSLGDNQFEQLDEN 331

Query: 184 TPL----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                   + +   V  G +E SN +   E   ++ + + + + + +I      + E 
Sbjct: 332 AWHLGVAGEGAFGKVSAGRVEISNVDLSQEFSDLVIMQRGYQASSQIISTANDMLQEL 389


>gi|157738165|ref|YP_001490849.1| flagellar hook protein FlgE [Arcobacter butzleri RM4018]
 gi|157700019|gb|ABV68179.1| flagellar hook protein FlgE [Arcobacter butzleri RM4018]
          Length = 723

 Score = 88.8 bits (218), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 54/132 (40%), Gaps = 10/132 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +   G++   +    +   ++N++N +TVG++  ++ F++ +       +Q      
Sbjct: 1   MIGALWTGVSGLASQTTAIDNESNNVANVNTVGYKASRISFADQIYQ-----NQIGKGSY 55

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-----GIILTRDGRFKVTDDGSLV 115
                     GS   TG + D AL+GD +F + +           TR G  ++ D G+L 
Sbjct: 56  VQDAEKLFTQGSMKVTGVDYDVALQGDGFFTVINKNTLGTAETFYTRAGNLRMGDSGTLQ 115

Query: 116 SASGKYPVLDMA 127
           +A G        
Sbjct: 116 TADGYEVQGWAM 127



 Score = 67.6 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 10/92 (10%), Positives = 29/92 (31%), Gaps = 4/92 (4%)

Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPP----TPLEDLSGVTVKRGFLEDSNANSM 207
              +  + +     +QG +   N+                + +   ++   LE S A+  
Sbjct: 629 QYAVGQVSIARFTNNQGLLAVGNNNFQATQESGKAIYSTNNNNTAGMQGKTLELSEADLS 688

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             +  ++   + F +    I   ++ +   I 
Sbjct: 689 ESLVNLMVFQRAFEANAKSITTADEMLTTLIN 720


>gi|330953727|gb|EGH53987.1| flagellar basal body rod protein FlgG [Pseudomonas syringae Cit 7]
          Length = 148

 Score = 88.4 bits (217), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 20/148 (13%), Positives = 51/148 (34%), Gaps = 7/148 (4%)

Query: 101 TRDGRFKVTDDGSLVSASGK--YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158
           +RDG F +  +G +V+A+G    P + +           +          +   ++I  +
Sbjct: 1   SRDGTFHLDANGQIVTANGYALEPAIVVPQNAQTFTVGQDGTVSVTLAGATATPQIIGNI 60

Query: 159 GLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQM 213
                    G      +           +  +          +  LE+SN +++ E+  M
Sbjct: 61  QTADFINPAGLQAIGGNLYLETGSSGAPQIGTPGLNGLGPTLQNTLENSNVSTVEELVNM 120

Query: 214 IHLTQKFNSITTLIDENEKSMLEAIRNI 241
           I   + +   + +I   ++ +    +N+
Sbjct: 121 ITTQRAYEMNSKVISTADQMLQNLTQNL 148


>gi|331269322|ref|YP_004395814.1| flagellar basal-body rod protein FlgG [Clostridium botulinum
           BKT015925]
 gi|329125872|gb|AEB75817.1| flagellar basal-body rod protein FlgG [Clostridium botulinum
           BKT015925]
          Length = 491

 Score = 88.4 bits (217), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 53/160 (33%), Gaps = 35/160 (21%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN------------DI 52
              G++     + +L    +N++N  T GF++ +V+F +++                 + 
Sbjct: 1   MYAGISGMKVNQTKLDVTGNNIANVSTTGFKSSRVRFKDMLSQNMGEAVGPGRNQGGVNG 60

Query: 53  DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP----------------- 95
            Q    V           G    T   LD A++G  +F +                    
Sbjct: 61  KQVGLGVQVAGIDSVMSQGMMQPTSRNLDVAMDGTGYFIVAKGALPESNAGGIAVSESDH 120

Query: 96  ------RGIILTRDGRFKVTDDGSLVSASGKYPVLDMASV 129
                   +  TRDG F +   G+L+++ G   +    + 
Sbjct: 121 TMSGGAFQVNYTRDGSFTLDHQGNLLTSDGYRVMGYAINE 160



 Score = 77.2 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 30/98 (30%), Gaps = 13/98 (13%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPL-------------EDLSGVTVKRGFLED 201
           +  +   S    +G  +   +  S                            + +G LE 
Sbjct: 391 LGQIATASFKNQEGLKKEGKNLFSNTANSGVPTVRSGLGAPKNLDNGDGYGEMLQGMLEM 450

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   +   MI  T+ F +   +I   ++ + + I 
Sbjct: 451 SNVDLAEQFTDMIVTTRAFQASGKMISTGDEILQDIIN 488


>gi|4928060|gb|AAD33398.1|AF129422_1 flagellar hook protein FlgE [Sinorhizobium meliloti]
          Length = 396

 Score = 88.4 bits (217), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 38/163 (23%), Positives = 70/163 (42%), Gaps = 2/163 (1%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
              G++   A   RLSTVA+N++N +T G++    +FS ++    N        V +   
Sbjct: 1   MRTGVSGMNAQSNRLSTVAENIANANTTGYKRASTEFSSMILPSGNGSYNSG-GVQTEVR 59

Query: 65  YLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASGKYPV 123
           Y   + G+   T +  D A++G  +F +E +     LTR G F    +G+LV+ASG   +
Sbjct: 60  YSISQQGATTFTTSASDLAIDGGGFFIVEGANGQEYLTRAGSFVPDSEGNLVNASGFTLM 119

Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
                  +        F+   +  ++  G +       S+  +
Sbjct: 120 GYEYEAGVDPTVVVNGFDGLTRVNLASDGLIATGSTKGSMGAN 162



 Score = 69.5 bits (168), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 17/138 (12%), Positives = 39/138 (28%), Gaps = 7/138 (5%)

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           K T  G   +A G     +  S         +     +        +    + L +V   
Sbjct: 258 KTTQLGYAFNADGGNIDGNAPSKVAGYQIDSDGIVYVKYENGKLDPR--YRIALANVQSP 315

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFN 221
                   +  S  +    +      +     +  G LE SN +   E+  MI   + + 
Sbjct: 316 DKLKPESGNVYSQGVDSGVIITGFAGSGDFGEILSGALESSNVDIAEELTAMIESQRNYT 375

Query: 222 SITTLIDENEKSMLEAIR 239
           + + +     + +   + 
Sbjct: 376 ANSKVFQTGSELLEVLVN 393


>gi|170756722|ref|YP_001782271.1| flagellar hook protein flgE [Clostridium botulinum B1 str. Okra]
 gi|169121934|gb|ACA45770.1| flagellar hook protein flgE [Clostridium botulinum B1 str. Okra]
          Length = 344

 Score = 88.4 bits (217), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 63/168 (37%), Gaps = 39/168 (23%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50
           M  S   G++   A + +L  V +N++N +T  F++  ++F +++    +          
Sbjct: 1   MLRSMYSGISGLKAQQTKLDIVGNNIANANTTAFKSQSIRFQDMLSQNMSSATGPSANLG 60

Query: 51  --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP------------- 95
             +  Q    V     Y     G+  +TG  LD A++G  +F +                
Sbjct: 61  GTNPRQVGLGVQVAGIYTKFTTGNMQTTGRNLDMAVDGPGFFIVGKGDITSQTSIITEST 120

Query: 96  --------------RGIILTRDGRFKVTDDGSLVSASGKYPVLDMASV 129
                           I  TRDG F + D+G+L+++ G   +    + 
Sbjct: 121 GDVQAGSIDGKNSTMDISFTRDGSFTLDDEGNLLTSDGFRIMGYAMTD 168


>gi|197122873|ref|YP_002134824.1| hypothetical protein AnaeK_2470 [Anaeromyxobacter sp. K]
 gi|196172722|gb|ACG73695.1| protein of unknown function DUF1078 domain protein
           [Anaeromyxobacter sp. K]
          Length = 428

 Score = 88.4 bits (217), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 47/198 (23%), Positives = 72/198 (36%), Gaps = 10/198 (5%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA-IKNDIDQKISFVA 60
            T+ + G     A    LS V DN++N +TVGF++ +  F + +   +     Q      
Sbjct: 4   LTALSSGTTGLQASSLELSVVGDNIANANTVGFKSGRAAFEDALSQSVIGGTGQIGLGSR 63

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG----IILTRDGRFKVTDDGSLVS 116
                     G+  STG   D AL+G+ +F +            TRDG+F V DDG LV+
Sbjct: 64  LAGVQKILTQGALASTGLATDLALQGNGFFVVRGAHAGQTGTFYTRDGQFTVDDDGYLVN 123

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
             G       A     +    +   VG     +   +  AT  L      Q       + 
Sbjct: 124 LEGLRVQGFPADPSGALAGLPDDLLVG-----TASAQPRATTRLTLKANLQADAAVPTAA 178

Query: 177 ISPNIPPTPLEDLSGVTV 194
             P  P       + +TV
Sbjct: 179 WDPANPGATSNFSTTMTV 196



 Score = 79.5 bits (194), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 22/161 (13%), Positives = 47/161 (29%), Gaps = 9/161 (5%)

Query: 83  ALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNV 142
           A      F+   P     T           S  +  G+          +++  +  I  V
Sbjct: 268 AAPQPLDFSFGDPTSAGGTGLAGVTQFSATSASTFIGQDGYGSGQLASVRVGPEGVISGV 327

Query: 143 GEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRG 197
              G+     +V+  + +          R   + +                    +V  G
Sbjct: 328 FTNGQ----TRVLGQVAVAGFAAPDQLDRAGGNLLQQTPGSGQPVVGAAGSGGRASVVAG 383

Query: 198 FLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            LE SN +   +  ++I   + F + +  I   ++ + E I
Sbjct: 384 SLEQSNVDLAEQFVRLIAAQRAFQANSKTITTADQLLSELI 424


>gi|209547946|ref|YP_002279863.1| flagellar hook protein FlgE [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209533702|gb|ACI53637.1| protein of unknown function DUF1078 domain protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 433

 Score = 88.4 bits (217), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 2/125 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           S    ++   A   RLSTVADN++N +T G++ +   FS +V       +     V S  
Sbjct: 6   SMKTAVSGMNAQANRLSTVADNIANVNTTGYKAVSTSFSSLVLPSSGG-NYNSGGVQSSV 64

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGKYP 122
                + G    T +  D A+ GD +F ++   G  +LTR G F   D+G+LV+A+G   
Sbjct: 65  RQAVSDQGDISYTTSGTDLAISGDGFFIVQGADGTPVLTRAGDFTKDDEGNLVNAAGFQL 124

Query: 123 VLDMA 127
           +    
Sbjct: 125 MGYSY 129



 Score = 71.4 bits (173), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 17/121 (14%), Positives = 35/121 (28%), Gaps = 1/121 (0%)

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178
                  +  V I               +   +  +        + +  G V   N    
Sbjct: 311 NGQAATPVKDVTIDGDGIVYAKYEDGSTKPLYRIPLANVASPDKLTLMSGNVYSANGQSG 370

Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
             +   P  +    T+K G LE SN +   E+ +MI   + + + + +       M   +
Sbjct: 371 VTVTGFPQTNG-LGTIKSGALEGSNVDLAGELTEMIESQRSYTANSKVFQTGSDIMDVLV 429

Query: 239 R 239
            
Sbjct: 430 N 430


>gi|297538896|ref|YP_003674665.1| fagellar hook-basal body protein [Methylotenera sp. 301]
 gi|297258243|gb|ADI30088.1| fagellar hook-basal body protein [Methylotenera sp. 301]
          Length = 422

 Score = 88.4 bits (217), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 32/133 (24%), Positives = 61/133 (45%), Gaps = 2/133 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SF  GL+   A  ++L  + +N++N +TVGF+  + +F++V              + +  
Sbjct: 2   SFQQGLSGLNAASKQLEVIGNNVANANTVGFKQSRAEFADVFANSLTGGGGTQIGIGTNL 61

Query: 64  EY--LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
                    G+  ST   LD A+ G  +F + +   +  +R+G+FK+  DG +V ++ K+
Sbjct: 62  STVAQQFTQGNVTSTNNSLDIAINGGGFFRMTNNGAVTYSRNGQFKMDKDGYIVDSASKH 121

Query: 122 PVLDMASVPIQIP 134
                A     I 
Sbjct: 122 LTGYAADTTGAIQ 134



 Score = 73.4 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 12/98 (12%), Positives = 32/98 (32%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLED 201
             + + + +  + L S     G      +  S +              +   ++   +ED
Sbjct: 323 YSNGQSRALGQVVLSSFANPNGLQSLGGNAWSESSTSGTPLTGVPNTGTLGVLQSSAVED 382

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E+  MI   + + +    I   ++ +   + 
Sbjct: 383 SNTDLTAELVNMITAQRYYQANAQTIKTQDQVLQTLVN 420


>gi|283782100|ref|YP_003372855.1| flagellar basal body FlaE domain-containing protein [Pirellula
           staleyi DSM 6068]
 gi|283440553|gb|ADB18995.1| flagellar basal body FlaE domain protein [Pirellula staleyi DSM
           6068]
          Length = 815

 Score = 88.4 bits (217), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 62/169 (36%), Gaps = 13/169 (7%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK------------N 50
           ++    L    A E ++  V +N++N+ TVGF+     F+      +             
Sbjct: 5   SALTTALTGMTAAETQIDVVGNNLANSQTVGFKASDSVFATQFLQTQSLGSGPTSGSGGT 64

Query: 51  DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVT 109
           +  Q        +       G+   +    D A++G+ +F ++  +G  + TR+G+FK  
Sbjct: 65  NPRQTGLGTRVAEITPDFTQGTIEVSSNPSDLAIQGEGFFIVQDSQGEQVYTRNGQFKTN 124

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158
            D  LV+ +G+  +        +I   + +      G  +         
Sbjct: 125 SDNELVTTTGQRVLGFGVDQDFEIQTTELVPLEIPLGSAAVAQATQNVY 173



 Score = 56.0 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 10/90 (11%), Positives = 31/90 (34%), Gaps = 5/90 (5%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIP-----PTPLEDLSGVTVKRGFLEDSNANSMYE 209
           +  + L       G  +R  +  +  +           +    ++  G +E SN +    
Sbjct: 723 LGQVRLARFANPAGLEQRGQNLFAQGVNSGLPVEGNPGNDGMGSIISGAVELSNTDIGKN 782

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +  ++  T ++     +I   ++ + E + 
Sbjct: 783 LIDLVLATTQYRGNARVITAAQELLDELLN 812


>gi|222834410|gb|EEE72887.1| predicted protein [Populus trichocarpa]
          Length = 170

 Score = 88.4 bits (217), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 31/139 (22%), Positives = 53/139 (38%), Gaps = 14/139 (10%)

Query: 19  LSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------------QKISFVASGKEY 65
           +  +++N++N  T GF+  +  F E++                     Q  + V      
Sbjct: 1   MDVISNNLANVSTTGFKRSRAVFEEMMYQTIRQPGAMSSDQTVLPSGMQIGTGVRPVATE 60

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLVSASGKYPVL 124
                G+   TG   D A+ G+ +F +  P G    TRDG F+V  +G LV++SG     
Sbjct: 61  RIHTQGNPQQTGNAKDVAIIGNGFFQVTMPDGTTSYTRDGSFQVDQNGQLVTSSGFVINP 120

Query: 125 DMASVPIQIPQKDEIFNVG 143
            +         +   FN  
Sbjct: 121 AITLPANYTSPRWASFNSP 139


>gi|315636308|ref|ZP_07891558.1| flagellar hook protein FlgE [Arcobacter butzleri JV22]
 gi|315479397|gb|EFU70080.1| flagellar hook protein FlgE [Arcobacter butzleri JV22]
          Length = 723

 Score = 88.4 bits (217), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 54/132 (40%), Gaps = 10/132 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +   G++   +    +   ++N++N +TVG++  ++ F++ +       +Q      
Sbjct: 1   MIGALWTGVSGLASQTTAIDNESNNVANVNTVGYKASRISFADQIYQ-----NQIGKGSY 55

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-----GIILTRDGRFKVTDDGSLV 115
                     GS   TG + D AL+GD +F + +           TR G  ++ D G+L 
Sbjct: 56  VQDAEKLFTQGSMKVTGVDYDVALQGDGFFTVINKNTLGTAETFYTRAGNLRMGDSGTLQ 115

Query: 116 SASGKYPVLDMA 127
           +A G        
Sbjct: 116 TADGYEVQGWAM 127



 Score = 67.2 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 10/92 (10%), Positives = 29/92 (31%), Gaps = 4/92 (4%)

Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPP----TPLEDLSGVTVKRGFLEDSNANSM 207
              +  + +     +QG +   N+                + +   ++   LE S A+  
Sbjct: 629 QYAVGQVSIARFTNNQGLLAVGNNNFQATQESGKAIYSTNNNNTAGMQGKTLELSEADLS 688

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             +  ++   + F +    I   ++ +   I 
Sbjct: 689 ESLVNLMVFQRAFEANAKSITTADEMLTTLIN 720


>gi|237799207|ref|ZP_04587668.1| flagellar hook protein FlgE [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|237806226|ref|ZP_04592930.1| flagellar hook protein FlgE [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|331022062|gb|EGI02119.1| flagellar hook protein FlgE [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|331027339|gb|EGI07394.1| flagellar hook protein FlgE [Pseudomonas syringae pv. oryzae str.
           1_6]
          Length = 582

 Score = 88.4 bits (217), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 3/133 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV--GAIKNDIDQKISFVAS 61
           SFN  ++   A  +RL    +N++N  T+GF++ + +FS +     + N  +     V  
Sbjct: 2   SFNTAISGIHAANKRLEVAGNNIANVGTLGFKSSRAQFSALYSSAQLGNGNNAVGDGVRL 61

Query: 62  GKEYLSKEVGSF-ISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
                +   G   IS+G  LD  ++G+ +F +     +  TR G F       +V + G 
Sbjct: 62  AAVQQNFNQGETVISSGNALDMRIQGNGFFVVSDQGSLAYTRAGAFLKDAANFVVDSDGG 121

Query: 121 YPVLDMASVPIQI 133
                 A+   +I
Sbjct: 122 RLQGYAANDKGEI 134



 Score = 71.8 bits (174), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 32/99 (32%), Gaps = 5/99 (5%)

Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLE 200
           G  +   K I  + L S     G   R ++  +        +       +  ++  G LE
Sbjct: 482 GFTNGMNKDIGQVMLASFANPHGLQPRSDTRWAATADSGVADYDVPGIGTLGSIISGGLE 541

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            SN     E+  +I     + + +  I      M   I+
Sbjct: 542 GSNVVLADELIALIQAQTAYQANSKAISTEVTLMQTLIQ 580


>gi|229132566|ref|ZP_04261415.1| Flagellar hook protein flgE [Bacillus cereus BDRD-ST196]
 gi|228650912|gb|EEL06898.1| Flagellar hook protein flgE [Bacillus cereus BDRD-ST196]
          Length = 407

 Score = 88.4 bits (217), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 65/197 (32%), Gaps = 13/197 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49
           M  +    +    A +  LS  ++N++N  TVG++  K  F +++               
Sbjct: 1   MIKALYTSITGMNATQNALSVTSNNIANAQTVGYKKQKAMFDDLLYNNSIGSKGDDKYAG 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107
            +     + V           G+   TG +   A+EG+ +F            TR G F 
Sbjct: 61  TNPKSIGNGVKMSGTVTDYSDGTITLTGGKTQAAMEGNGFFVVGDSKGGNTEFTRKGTFG 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           ++ D  + +  G+Y     A+          I    +    S  G +  + G+   ++  
Sbjct: 121 ISSDYYITNTEGQYVFAYPANAATGEVDLSGIPGPLQIPMGSAIGGIRTSKGVVGGNIPA 180

Query: 168 GFVRRENSGISPNIPPT 184
              +      + +    
Sbjct: 181 DAKQITQELPAYDDAGN 197



 Score = 62.6 bits (150), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 11/93 (11%), Positives = 28/93 (30%), Gaps = 5/93 (5%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYE 209
              + +       G ++  N   +       L            V+    E +N +   E
Sbjct: 315 AGQLAVAMFPNEGGLMKNGNGNYTATNTTGILAMGVSGQNGAGKVRGSAQEGANVDLSVE 374

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
              ++   + F     +I  +++ + E +  I 
Sbjct: 375 FVDLMLYQRGFQGNAKVIKISDEVLNEVVNLIR 407


>gi|255305280|ref|ZP_05349452.1| flagellar hook protein [Clostridium difficile ATCC 43255]
          Length = 331

 Score = 88.4 bits (217), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 17/116 (14%), Positives = 41/116 (35%), Gaps = 1/116 (0%)

Query: 125 DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP-P 183
              +  +     +    V     I+     +  +  Y+     G      +   P+    
Sbjct: 213 GQRTQFVYDIPDNSEVGVVPNPAIATDSGKLQKVQTYAFQNPAGLDAEGGNLFKPSANSG 272

Query: 184 TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            P    +   + +G +E SN +   E  +MI  ++ F + + +I  +++ + E I 
Sbjct: 273 DPQIAGATGNIIQGAIEASNVDIAEEFTEMIIASRSFQANSKIISTSDEILQEIIN 328



 Score = 88.0 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 55/180 (30%), Gaps = 25/180 (13%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  +   G++   A + +L  + +N++N  T  F+    + ++                 
Sbjct: 1   MIKAMYSGVSGMKANQTKLDVIGNNVANAGTTSFKKSSARITDSFYQTVLYASAPTAALG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
             ++ Q                G+   T    D  ++GD +  +     ++ TRDG F +
Sbjct: 61  GTNLGQVGVGSKISSINKDMTQGNVQPTNRPSDLMIDGDGYLPVVRQGTVMYTRDGSFNL 120

Query: 109 T-------------DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI 155
                           G LV+  G   V  + +      +     +         +  VI
Sbjct: 121 DTGFKAAAGPLQGVKGGRLVNGDGYMLVGQIMTGKYDANKGTFTPDAKPAAGWPNEPVVI 180


>gi|320538206|ref|ZP_08038101.1| fagellar hook-basal body protein [Treponema phagedenis F0421]
 gi|320145023|gb|EFW36744.1| fagellar hook-basal body protein [Treponema phagedenis F0421]
          Length = 452

 Score = 88.4 bits (217), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 51/128 (39%), Gaps = 12/128 (9%)

Query: 12  QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------------ISFV 59
               + R+  + +N++N +T GF+  +V F +++    +   +                V
Sbjct: 1   MQNHQTRMDVIGNNVANVNTTGFKRGRVNFQDLISQQLSGASRPNEEVGGVNPKEVGLGV 60

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119
                      G+  +TG   D A++G+ +F L+       TR G F V  DG+LV+ + 
Sbjct: 61  MVASIDTVHTQGALQTTGINTDIAIQGNGFFILKDGEKSFYTRAGAFGVDRDGTLVNPAN 120

Query: 120 KYPVLDMA 127
              V    
Sbjct: 121 GMRVQGWM 128



 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 20/162 (12%), Positives = 43/162 (26%), Gaps = 5/162 (3%)

Query: 83  ALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNV 142
           A   +          I L   G  + T       ++ K    D  ++      K +   +
Sbjct: 288 ANPDEGGAPTRHTFNINLGEIGTSRNTITQFAERSTTKAYQQDGYAMGYLENFKIDQSGI 347

Query: 143 GEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRG 197
                 +   + I  + L       G  +   +    +                  +  G
Sbjct: 348 ITGVYSNGASREIGQLALAGFANQGGLEKAGENTYIQSNNSGIANITVSGVMGKGKLIAG 407

Query: 198 FLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            LE SN +   +   MI   + F +    I  ++  +   + 
Sbjct: 408 TLEMSNVDLTDQFTDMIITQRGFQAGAKTIQTSDTMLETVLN 449


>gi|170758711|ref|YP_001787975.1| flagellar hook protein flgE [Clostridium botulinum A3 str. Loch
           Maree]
 gi|169405700|gb|ACA54111.1| flagellar hook protein flgE [Clostridium botulinum A3 str. Loch
           Maree]
          Length = 345

 Score = 88.4 bits (217), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 63/168 (37%), Gaps = 39/168 (23%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50
           M  S   G++   A + +L  V +N++N +T  F++  ++F +++    +          
Sbjct: 1   MLRSMYSGISGLKAQQTKLDIVGNNIANANTTAFKSQSIRFQDMLSQNMSSATGPSANLG 60

Query: 51  --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP------------- 95
             +  Q    V     Y     G+  +TG  LD A++G  +F +                
Sbjct: 61  GTNPRQVGLGVQVAGIYTKFTTGNMQTTGRNLDMAVDGPGFFIVGKGDITSQTSIITEAT 120

Query: 96  --------------RGIILTRDGRFKVTDDGSLVSASGKYPVLDMASV 129
                           I  TRDG F + D+G+L+++ G   +    + 
Sbjct: 121 GDVQAGSIDGKSSTMDISFTRDGSFTLDDEGNLLTSDGFRIMGYAMTD 168



 Score = 69.1 bits (167), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 13/98 (13%), Positives = 30/98 (30%), Gaps = 13/98 (13%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIP-------------PTPLEDLSGVTVKRGFLED 201
           +  + + S     G  +   +    +                    D     +  G +E 
Sbjct: 245 LGQVAMASFKNEGGLEKMGKNLYKNSANSGEAIIRTPRGTAEENRNDKGYGDMLNGMIEM 304

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E  +MI   + F +   +I   ++ + E + 
Sbjct: 305 SNVDLAEEFTEMIVANRAFQACGKMITTGDEILQELVN 342


>gi|206974982|ref|ZP_03235897.1| flagellar hook protein FlgE [Bacillus cereus H3081.97]
 gi|206747001|gb|EDZ58393.1| flagellar hook protein FlgE [Bacillus cereus H3081.97]
          Length = 407

 Score = 88.4 bits (217), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 64/197 (32%), Gaps = 13/197 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49
           M  +    +    A +  LS  ++N++N  TVG++  K  F +++               
Sbjct: 1   MIKALYTSITGMNATQNALSVTSNNIANAQTVGYKKQKAMFDDLLYNNSIGAKGDDRYAG 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107
            +     + V           G+   TG +   A+EG+ +F         +  TR G F 
Sbjct: 61  TNPKSIGNGVKMSGTVTDYTDGTITLTGGKTQAAMEGNGFFVVGDSKAGNMEFTRKGTFT 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           ++ D  + +  G+Y     A           I    +    S  G +  + G+   ++  
Sbjct: 121 ISSDYYITNTEGQYVFAYPADPSTGNVDLTGIPGPLQVPMGSAIGGIRTSKGVVGGNIPA 180

Query: 168 GFVRRENSGISPNIPPT 184
              +        +    
Sbjct: 181 DAKQITQELPVYDNAGN 197



 Score = 65.7 bits (158), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 12/93 (12%), Positives = 29/93 (31%), Gaps = 5/93 (5%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYE 209
              + +       G ++  N   +       L            V+ G  E +N +   E
Sbjct: 315 AGQLAVAMFPNEGGLMKTGNGNYTATNTTGILAMGVSGQNGAGKVRGGAQEGANVDLSVE 374

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
              ++   + F     +I  +++ + E +  I 
Sbjct: 375 FVDLMLYQRGFQGNAKVIKISDEVLNEVVNLIR 407


>gi|229195966|ref|ZP_04322719.1| Flagellar hook protein flgE [Bacillus cereus m1293]
 gi|228587525|gb|EEK45590.1| Flagellar hook protein flgE [Bacillus cereus m1293]
          Length = 407

 Score = 88.0 bits (216), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 64/197 (32%), Gaps = 13/197 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49
           M  +    +    A +  LS  ++N++N  TVG++  K  F +++               
Sbjct: 1   MIKALYTSITGMNATQNALSVTSNNIANAQTVGYKKQKAMFDDLLYNNSIGAKGDDRYAG 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107
            +     + V           G+   TG +   A+EG+ +F         +  TR G F 
Sbjct: 61  TNPKSIGNGVKMSGTVTDYTDGTITLTGGKTQAAMEGNGFFVVGDSKAGNMEFTRKGTFT 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           ++ D  + +  G+Y     A           I    +    S  G +  + G+   ++  
Sbjct: 121 ISSDYYITNTEGQYVFAYPADPSTGNVDLTGIPGPLQVPMGSAIGGIRTSKGVVGGNIPA 180

Query: 168 GFVRRENSGISPNIPPT 184
              +        +    
Sbjct: 181 DAKQITQELPVYDNAGN 197



 Score = 63.3 bits (152), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 11/93 (11%), Positives = 28/93 (30%), Gaps = 5/93 (5%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYE 209
              + +       G ++  N   +       L            V+    E +N +   E
Sbjct: 315 AGQLAVAMFPNEGGLMKTGNGNYTATNTTGILAMGVSGQNGAGKVRGSAQEGANVDLSVE 374

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
              ++   + F     +I  +++ + E +  I 
Sbjct: 375 FVDLMLYQRGFQGNAKVIKISDEVLNEVVNLIR 407


>gi|83814503|ref|YP_446705.1| flagellar biosynthesis cell-distal portion of basal-body rod
           [Salinibacter ruber DSM 13855]
 gi|294508641|ref|YP_003572700.1| flagellar hook protein FlgE [Salinibacter ruber M8]
 gi|83755897|gb|ABC44010.1| flagellar biosynthesis cell-distal portion of basal-body rod
           [Salinibacter ruber DSM 13855]
 gi|294344970|emb|CBH25748.1| Flagellar hook protein FlgE [Salinibacter ruber M8]
          Length = 432

 Score = 88.0 bits (216), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 36/145 (24%), Positives = 58/145 (40%), Gaps = 16/145 (11%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55
             S +IG++   + + RL TV++N++N+ T  F+  +  FSE +G     + +       
Sbjct: 3   LQSLSIGVSGLRSHQTRLDTVSNNIANSSTTAFKRQRAAFSEELGQAILGVGRTAGGSNI 62

Query: 56  -----ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP-----RGIILTRDGR 105
                   V+      +   GS   TG + D AL GD +F              LTR G 
Sbjct: 63  NPSKVGRGVSVASIDRNFSQGSLNDTGIKTDLALNGDGFFVASPKSGAASDQRRLTRAGN 122

Query: 106 FKVTDDGSLVSASGKYPVLDMASVP 130
           F    +G LV+A+G           
Sbjct: 123 FTFNQNGELVTANGLNVQGWEVGED 147



 Score = 73.7 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 12/89 (13%), Positives = 34/89 (38%), Gaps = 5/89 (5%)

Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEM 210
             + +  V+   G  ++  +  +       L+          +V  G LE SN +   E 
Sbjct: 341 YQLAIGDVNNPNGLEQQGENFFTTTGASGDLQLGRAGRDLQTSVVSGALESSNVDLAKEF 400

Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             +I   + + + + +I   ++ + + ++
Sbjct: 401 SDLIKAQRSYQASSQIITTADEVLNQTVQ 429


>gi|332701537|ref|ZP_08421625.1| flagellar hook-basal body protein [Desulfovibrio africanus str.
           Walvis Bay]
 gi|332551686|gb|EGJ48730.1| flagellar hook-basal body protein [Desulfovibrio africanus str.
           Walvis Bay]
          Length = 532

 Score = 88.0 bits (216), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 48/128 (37%), Gaps = 5/128 (3%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG---AIKNDIDQKISFV 59
            S    ++   +  + +S + +N++N +T+GF++  V F ++     +  +  DQ     
Sbjct: 5   NSMWTAISGLTSHSESMSVIGNNLANANTLGFKSGTVHFEDMFYSQLSTASGFDQVGHGS 64

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR--GIILTRDGRFKVTDDGSLVSA 117
                Y +   G   ++      AL G   F + +        TR G F    +G L   
Sbjct: 65  RVSTIYTNYTQGPHEASSESTHVALGGKGMFVVTNKTSGSTYYTRAGNFTFNQNGYLTDP 124

Query: 118 SGKYPVLD 125
           +G      
Sbjct: 125 NGYVVQGW 132



 Score = 74.5 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 18/123 (14%), Positives = 35/123 (28%), Gaps = 5/123 (4%)

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
              D  +             V      + +   +  + +   D  QG  +   +  S   
Sbjct: 406 QTQDGYAPGFLQDISVNDDGVVSGQYSNGQIIDLFVLAVADFDNYQGLKQEGGNLFSETT 465

Query: 182 PPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                            +    LE SN +   EM ++I + + F +   +I   +  M E
Sbjct: 466 ESGMARTGTANVGGRGDIASATLEQSNVDMSTEMVRLITIQRGFQANGKVITTTDTLMGE 525

Query: 237 AIR 239
            I 
Sbjct: 526 VIN 528


>gi|329898289|ref|ZP_08272372.1| Flagellar hook protein flgE [gamma proteobacterium IMCC3088]
 gi|328920854|gb|EGG28297.1| Flagellar hook protein flgE [gamma proteobacterium IMCC3088]
          Length = 975

 Score = 88.0 bits (216), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 3/120 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG--AIKNDIDQKISFVAS 61
           SF   L    A    LS  ++N++N+ T GF+     F ++     ++         VA 
Sbjct: 2   SFYTSLTGLNAATTELSVTSNNIANSATAGFKRSSASFGDIFATSPLQRASAVVGQGVAL 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLVSASGK 120
            +       G    +   LD A+ GD +F L+S  G    TR+G F + +   +V+++G+
Sbjct: 62  KEISQEFSQGFVQFSSNSLDLAITGDGFFPLQSSDGSRVYTRNGSFMLNEQNQMVNSAGQ 121



 Score = 74.1 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 22/132 (16%), Positives = 42/132 (31%), Gaps = 9/132 (6%)

Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172
             V +  +    +   V + I +   +      G     GK+I    L +    +G  + 
Sbjct: 845 FAVLSQSQNGAPEGDLVGVNIGEDGLVVASYSNGSQKSLGKII----LANFATPKGLRQV 900

Query: 173 ENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
            NSG   +                 T++ G  E SN +   E+  +I   + F +    I
Sbjct: 901 GNSGFVASSESGEARQGEPGSAGFGTIRAGATERSNVDLTAELVNLITAQRNFQANAKAI 960

Query: 228 DENEKSMLEAIR 239
           + +       I 
Sbjct: 961 ETSSTLTSTIIN 972


>gi|42780846|ref|NP_978093.1| flagellar hook protein FlgE [Bacillus cereus ATCC 10987]
 gi|42736766|gb|AAS40701.1| flagellar hook protein FlgE, putative [Bacillus cereus ATCC 10987]
          Length = 407

 Score = 88.0 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 64/197 (32%), Gaps = 13/197 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49
           M  +    +    A +  LS  ++N++N  TVG++  K  F +++               
Sbjct: 1   MIKALYTSITGMNATQNALSVTSNNIANAQTVGYKKQKAMFDDLLYNNSIGAKGDDRYAG 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107
            +     + V           G+   TG +   A+EG+ +F         +  TR G F 
Sbjct: 61  TNPKSIGNGVKMSGTVTDYTDGTITLTGGKTQAAMEGNGFFVVGDSKAGNMEFTRKGTFT 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           ++ D  + +  G+Y     A           I    +    S  G +  + G+   ++  
Sbjct: 121 ISSDYYITNTEGQYVFAYPADPSTGNVDLSGIPGPLQVPMGSAIGGIRTSKGVVGGNIPA 180

Query: 168 GFVRRENSGISPNIPPT 184
              +        +    
Sbjct: 181 DAKQITQELPVYDNAGN 197



 Score = 63.3 bits (152), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 11/93 (11%), Positives = 28/93 (30%), Gaps = 5/93 (5%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYE 209
              + +       G ++  N   +       L            V+    E +N +   E
Sbjct: 315 AGQLAVAMFPNEGGLMKTGNGNYTATNTTGILAMGVSGQNGAGKVRGSAQEGANVDLSVE 374

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
              ++   + F     +I  +++ + E +  I 
Sbjct: 375 FVDLMLYQRGFQGNAKVIKISDEVLNEVVNLIR 407


>gi|220917665|ref|YP_002492969.1| protein of unknown function DUF1078 domain protein
           [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219955519|gb|ACL65903.1| protein of unknown function DUF1078 domain protein
           [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 428

 Score = 88.0 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 47/198 (23%), Positives = 72/198 (36%), Gaps = 10/198 (5%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA-IKNDIDQKISFVA 60
            T+ + G     A    LS V DN++N +TVGF++ +  F + +   +     Q      
Sbjct: 4   LTALSSGTTGLQASSLELSVVGDNIANANTVGFKSGRAAFEDALSQSVIGGTGQIGLGSR 63

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG----IILTRDGRFKVTDDGSLVS 116
                     G+  STG   D AL+G+ +F +            TRDG+F V DDG LV+
Sbjct: 64  LAGVQKILTQGALASTGLATDLALQGNGFFVVRGAHAGQTGTFYTRDGQFTVDDDGYLVN 123

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
             G       A     +    +   VG     +   +  AT  L      Q       + 
Sbjct: 124 LEGLRVQGFPADPSGALAGLPDDLLVG-----TASAQPRATTRLTLKANLQADAAVPTAA 178

Query: 177 ISPNIPPTPLEDLSGVTV 194
             P  P       + +TV
Sbjct: 179 WDPANPGATSNFSTTMTV 196



 Score = 79.1 bits (193), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 15/128 (11%), Positives = 40/128 (31%), Gaps = 5/128 (3%)

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
           +++  +   D          +     V      + + +V+  + +          R   +
Sbjct: 297 TSASTFIGQDGYGSGQLASVRVGPEGVISGVFTNGQTRVLGQVAVAGFAAPDQLDRAGGN 356

Query: 176 GISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
            +            +  +     V  G LE SN +   +  ++I   + F + +  I   
Sbjct: 357 LLQQTPGSGQPVVGAAGSGGRASVVAGSLEQSNVDLAEQFVRLIAAQRAFQANSKTITTA 416

Query: 231 EKSMLEAI 238
           ++ + E I
Sbjct: 417 DQLLSELI 424


>gi|328545491|ref|YP_004305600.1| flagellar basal body FlaE [polymorphum gilvum SL003B-26A1]
 gi|326415232|gb|ADZ72295.1| Flagellar basal body FlaE [Polymorphum gilvum SL003B-26A1]
          Length = 424

 Score = 88.0 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 33/132 (25%), Positives = 58/132 (43%), Gaps = 2/132 (1%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
              G++   A   +L TVADN++N+ T G++    +FS ++ +           V +   
Sbjct: 7   MRTGVSGMNAQSSKLGTVADNIANSSTTGYKRAASEFSSMILSQGTGTYNSG-GVKAHTV 65

Query: 65  YLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYPV 123
           Y   + G+   T + LD A++G+ +F + +      LTR G F V   G LV+ +G Y  
Sbjct: 66  YAISQQGAISYTTSGLDLAIDGNGFFVVADREGSTALTRAGSFVVDSKGYLVNTAGYYLQ 125

Query: 124 LDMASVPIQIPQ 135
                    +  
Sbjct: 126 GYPIGNGGTVAP 137



 Score = 67.6 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 26/73 (35%), Gaps = 1/73 (1%)

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
            G +   ++         P E     ++  G LE SN +   E+  MI   + + + + +
Sbjct: 350 SGNIYTVSNNSGEVRVGFPGE-GGLGSLTVGALESSNVDLASELTSMIESQRGYTANSKV 408

Query: 227 IDENEKSMLEAIR 239
                  + E + 
Sbjct: 409 FKAGSDLLEELVN 421


>gi|307318929|ref|ZP_07598360.1| fagellar hook-basal body protein [Sinorhizobium meliloti AK83]
 gi|306895343|gb|EFN26098.1| fagellar hook-basal body protein [Sinorhizobium meliloti AK83]
          Length = 402

 Score = 88.0 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 37/163 (22%), Positives = 70/163 (42%), Gaps = 2/163 (1%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
              G++   A   RLSTVA+N++N +T G++    +FS ++    N        V +   
Sbjct: 7   MRTGVSGMNAQSNRLSTVAENIANANTTGYKRASTEFSSMILPSGNGSYNSG-GVQTEVR 65

Query: 65  YLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASGKYPV 123
           Y   + G+   T +  D A++G  +F +E +     LTR G F    +G+LV+A+G   +
Sbjct: 66  YSISQQGATTFTTSASDLAIDGGGFFIVEGANGQEYLTRAGSFVPDSEGNLVNAAGFTLM 125

Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
                  +        F+   +  ++  G +       S+  +
Sbjct: 126 GYEYEAGVDPTVVVNGFDGLTRVNLASDGLIATGSTKGSMGAN 168



 Score = 69.1 bits (167), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 17/138 (12%), Positives = 39/138 (28%), Gaps = 7/138 (5%)

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           K T  G   +A G     +  S         +     +        +    + L +V   
Sbjct: 264 KTTQLGYAFNADGGNIDGNAPSKVAGYQIDSDGIVYVKYENGKLDPR--YRIALANVQSP 321

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFN 221
                   +  S  +    +      +     +  G LE SN +   E+  MI   + + 
Sbjct: 322 DKLRPESGNVYSQGVDSGVIITGFAGSGDFGEILSGALESSNVDIAEELTAMIESQRNYT 381

Query: 222 SITTLIDENEKSMLEAIR 239
           + + +     + +   + 
Sbjct: 382 ANSKVFQTGSELLEVLVN 399


>gi|149675698|dbj|BAF64728.1| flagellar hook protein [Shewanella livingstonensis]
          Length = 459

 Score = 88.0 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 5/126 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61
           S NI L+   A ++ L+T A+N++N +T+GF+  + +F++V       N          +
Sbjct: 2   SLNIALSGIAAAQKDLNTTANNIANVNTIGFKESRAEFADVYADSIFSNSKTAVGGGATT 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESP---RGIILTRDGRFKVTDDGSLVSAS 118
            +       GS   T   LD A+ G  +F   S    +    TR G FKV     +V ++
Sbjct: 62  TQVAQQFHQGSLQFTSNSLDMAISGGGFFVTSSELGSQDQSYTRAGAFKVDSSNYMVDSA 121

Query: 119 GKYPVL 124
           G +   
Sbjct: 122 GNFLQG 127



 Score = 65.7 bits (158), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 33/91 (36%), Gaps = 5/91 (5%)

Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMY 208
            ++ + L      QG  +  N+    ++             +  +++   LE SN +   
Sbjct: 367 PLSRVALVRFANEQGLTQVGNTSWKASLDSGAALAGEANSGTFGSIRSSALEQSNVDLTT 426

Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           E+  +I   + F + +  ++ N       ++
Sbjct: 427 ELVDLISAQRNFQANSRTLEVNNTLNQTILQ 457


>gi|56460252|ref|YP_155533.1| flagellar hook protein FlgE [Idiomarina loihiensis L2TR]
 gi|56179262|gb|AAV81984.1| Flagellar hook protein FlgE [Idiomarina loihiensis L2TR]
          Length = 449

 Score = 88.0 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 42/195 (21%), Positives = 69/195 (35%), Gaps = 5/195 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--ISFVAS 61
           SF I L+   A ++ L   A+N+SN  T GF+  + +F++V      +         V +
Sbjct: 2   SFKIALSGINASQKDLDVTANNISNVKTSGFKQSRAEFADVYATSIFNAGNTKVGDGVLT 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESP---RGIILTRDGRFKVTDDGSLVSAS 118
                    G+   T   LD A+ G+ +FA       R +  TR G FK+ DD  +V   
Sbjct: 62  SSVAQQFSQGTLEFTENSLDMAISGNGFFATTDGLGSRDMTYTRSGAFKLNDDKFIVDNQ 121

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178
           G Y                 +            G   +T  +++           +   +
Sbjct: 122 GNYLQGYQVDRNSGTNSSVALATTQPIRIPDVAGAPQSTDNVFTAFNVDARRSPIDGAAN 181

Query: 179 PNIPPTPLEDLSGVT 193
           P  P TP    S  +
Sbjct: 182 PFDPETPSTYQSSTS 196



 Score = 69.1 bits (167), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 61/216 (28%), Gaps = 19/216 (8%)

Query: 29  TDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA 88
               G+  ++V+F          +      VA+G+               + D  L   A
Sbjct: 246 ASVNGYAGLRVEF----------LGSGDPDVAAGQNTFDPGSIDLSGNNVDGDPYLNNGA 295

Query: 89  WFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI 148
                      LT             V+A  +          + I +   I      G++
Sbjct: 296 DAQTIQFNFQDLTGTTTPTQFASDFEVTALDQDGSTVGRLTNVDIDKSGLIAATYSNGDV 355

Query: 149 SQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSN 203
                 +  + +      QG  +   +    +I             +   ++   LE+SN
Sbjct: 356 QY----LGQVAIVRFANEQGLTQIGGTKWRESIDSGEPLSGEANTGTFGGIEASALENSN 411

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            N   E+  +I   + F + +  ++ N       ++
Sbjct: 412 VNLTKELVDLITAQRNFQANSRSLEVNNTINQTILQ 447


>gi|227820875|ref|YP_002824845.1| flagellar hook protein FlgE [Sinorhizobium fredii NGR234]
 gi|227339874|gb|ACP24092.1| putative flagellar hook protein FlgE [Sinorhizobium fredii NGR234]
          Length = 404

 Score = 88.0 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/191 (20%), Positives = 73/191 (38%), Gaps = 4/191 (2%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
              G++   A   RLSTVA+N++N+ T G++    +FS ++    N        V +   
Sbjct: 7   MRTGVSGMNAQANRLSTVAENIANSSTTGYKRASTEFSSMILPSSNGSYNSG-GVETSVR 65

Query: 65  YLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASGKYPV 123
           Y   + GS   T +  D A++GD +F ++ +     LTR G F   D G+LV+A+G   +
Sbjct: 66  YSISDQGSTTYTTSASDLAIDGDGFFIVQGANGQEYLTRAGAFVQDDSGNLVNAAGFTLM 125

Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183
                    +     +       E++     +   G  +  M         +G       
Sbjct: 126 GYEYEAG--VDPTVVVNGFDGLTEVNLASDGLTAAGSTAGAMGANLPSGAANGDVSTTSL 183

Query: 184 TPLEDLSGVTV 194
              +      +
Sbjct: 184 VVYDTQGNTRI 194



 Score = 69.9 bits (169), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 17/138 (12%), Positives = 41/138 (29%), Gaps = 7/138 (5%)

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           + T  G+  +  G     +  S         +     +      + +    + L SV   
Sbjct: 266 ETTQLGTSFTPDGGSIDGNAPSKVSGYQIDTDGVVYIKYANGELEPR--YRIALASVQSP 323

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFN 221
              V    +  S  +    +      +     +  G LE SN +   E+  MI   + + 
Sbjct: 324 DKLVPESGNVYSQGVDSGVIVTGFAGSGSFGEILSGALESSNVDIADELTSMIESQRNYT 383

Query: 222 SITTLIDENEKSMLEAIR 239
           + + +     + +   + 
Sbjct: 384 ANSKVFQTGSELLEVLVN 401


>gi|148380612|ref|YP_001255153.1| flagellar hook protein flgE [Clostridium botulinum A str. ATCC
           3502]
 gi|153934204|ref|YP_001384898.1| flagellar hook protein flgE [Clostridium botulinum A str. ATCC
           19397]
 gi|153936013|ref|YP_001388367.1| flagellar hook protein flgE [Clostridium botulinum A str. Hall]
 gi|148290096|emb|CAL84215.1| flagellar hook protein [Clostridium botulinum A str. ATCC 3502]
 gi|152930248|gb|ABS35748.1| flagellar hook protein flgE [Clostridium botulinum A str. ATCC
           19397]
 gi|152931927|gb|ABS37426.1| flagellar hook protein flgE [Clostridium botulinum A str. Hall]
          Length = 345

 Score = 88.0 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 63/168 (37%), Gaps = 39/168 (23%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50
           M  S   G++   A + +L  V +N++N +T  F++  ++F +++    +          
Sbjct: 1   MLRSMYSGISGLKAQQTKLDIVGNNIANANTTAFKSQSIRFQDMLSQNMSSATGPSANLG 60

Query: 51  --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP------------- 95
             +  Q    V     +     G+  +TG  LD A++G  +F +                
Sbjct: 61  GTNPRQVGLGVQVAGIFTKFTTGNMQTTGRNLDMAVDGPGFFIVGKGDITSQTSIITEGT 120

Query: 96  --------------RGIILTRDGRFKVTDDGSLVSASGKYPVLDMASV 129
                           I  TRDG F + D+G+L+++ G   +    + 
Sbjct: 121 DDAQAGSIDGKSSTMDISFTRDGSFTLDDEGNLLTSDGFRIMGYAMTD 168



 Score = 69.1 bits (167), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 13/98 (13%), Positives = 30/98 (30%), Gaps = 13/98 (13%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIP-------------PTPLEDLSGVTVKRGFLED 201
           +  + + S     G  +   +    +                    D     +  G +E 
Sbjct: 245 LGQVAMASFKNEGGLEKMGKNLYKNSANSGEAIIRTPRGTAEENRNDKGYGDMLNGMIEM 304

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E  +MI   + F +   +I   ++ + E + 
Sbjct: 305 SNVDLAEEFTEMIVANRAFQACGKMITTGDEILQELVN 342


>gi|119477953|ref|ZP_01618053.1| flagellar hook protein [marine gamma proteobacterium HTCC2143]
 gi|119448866|gb|EAW30108.1| flagellar hook protein [marine gamma proteobacterium HTCC2143]
          Length = 429

 Score = 88.0 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/149 (20%), Positives = 59/149 (39%), Gaps = 2/149 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG-AIKNDIDQKISFVASG 62
           SFN  L+   A    L    +N++N  T+GF+  + +F +V   ++ +  +   S V   
Sbjct: 2   SFNTALSGLRAANTDLEVSGNNIANASTIGFKRSRAEFGDVYANSLVSGSNTTGSGVLVN 61

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKY 121
                 + G+   T   LD A+ G  +F +         TR G F + D+G + + SG  
Sbjct: 62  SISQQFDQGNISFTDNSLDLAINGTGFFVVAESSGATAYTRAGYFGIDDEGYITNNSGST 121

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQ 150
               + +               + G+++ 
Sbjct: 122 LQGFLPTGTGSGVGGTPADLRVQSGDLAP 150



 Score = 76.1 bits (185), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 13/91 (14%), Positives = 32/91 (35%), Gaps = 5/91 (5%)

Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMY 208
           ++  + +      QG      +G + +         +        ++ G LE+SN +   
Sbjct: 337 ILGQVAMALFSNEQGLNPLGETGWAQSFESGEPVVGAPLTGNLGGIQSGALEESNVDLSE 396

Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           E+ ++I   + F +    I+  +      I 
Sbjct: 397 ELVRLIIAQRNFQANAKTIETADTVTQAIIN 427


>gi|218886713|ref|YP_002436034.1| hypothetical protein DvMF_1618 [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218757667|gb|ACL08566.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           vulgaris str. 'Miyazaki F']
          Length = 525

 Score = 88.0 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 75/188 (39%), Gaps = 8/188 (4%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA---IKNDIDQKISFV 59
           +S    ++  L+  + +S + +N++N+ T G++++ + F +V  +       IDQ  +  
Sbjct: 5   SSMYASVSGLLSTAESISVIGNNLANSSTTGYKSMSMLFEDVFYSSITTSGGIDQIGNGS 64

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR---GIILTRDGRFKVTDDGSLVS 116
           A          GS+  T   ++ A+ G+ +F +E P+    I  TR G F    +G LV+
Sbjct: 65  AISAISTDFSQGSYQDTSEAMNMAIAGEGYFIVEDPQNDGQIYYTRAGDFTFNTEGYLVN 124

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           +SG                  +    G  G++  K +        +V ++       +  
Sbjct: 125 SSGYQVQGWAVDPDT--ASSTDPSTTGALGDVQLKSRTSPASATTNVTLTVNLDSGGDDN 182

Query: 177 ISPNIPPT 184
            +    P 
Sbjct: 183 STSTTDPY 190



 Score = 76.4 bits (186), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 29/82 (35%), Gaps = 5/82 (6%)

Query: 162 SVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGF-----LEDSNANSMYEMGQMIHL 216
           S +  QG      +  S                  G      LE+SN +   EM  +I +
Sbjct: 440 SFNNDQGLQLEGGNLYSATTESGTANIGRAGQGIYGSIYGEKLEESNVDVSTEMVDLIVM 499

Query: 217 TQKFNSITTLIDENEKSMLEAI 238
            + + + + +I   ++ +  A+
Sbjct: 500 QRAYQANSKVITTVDEMLQTAL 521


>gi|114046838|ref|YP_737388.1| flagellar hook protein FlgE [Shewanella sp. MR-7]
 gi|113888280|gb|ABI42331.1| flagellar basal body FlaE domain protein [Shewanella sp. MR-7]
          Length = 453

 Score = 88.0 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/125 (30%), Positives = 62/125 (49%), Gaps = 5/125 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61
           SFNI L+   A ++ L+T A+N++N +T+GF+  + +F++V       N        VA+
Sbjct: 2   SFNIALSGISAAQKDLNTTANNIANANTIGFKESRAEFADVYANSIFSNSKTAVGGGVAT 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII---LTRDGRFKVTDDGSLVSAS 118
            +       GS   T   LD A++G  +F   S  G +    TR G FKV  +  +V ++
Sbjct: 62  SQVAQQFHQGSLQLTNNSLDLAIKGGGFFVTASEIGTLDHQFTRAGAFKVDKNNYMVDSA 121

Query: 119 GKYPV 123
           G Y  
Sbjct: 122 GNYLQ 126



 Score = 64.9 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 13/91 (14%), Positives = 33/91 (36%), Gaps = 5/91 (5%)

Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMY 208
            ++ + L      QG  +  N+    ++   P         +  ++    LE SN +   
Sbjct: 361 PLSRVALVRFANEQGLTQVGNTSWKASLESGPALAGEPNSGTFGSISSSALEQSNIDLTT 420

Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           E+  +I   + F + +  ++ N       ++
Sbjct: 421 ELVDLISAQRNFQANSRTLEVNNTLQQTVLQ 451


>gi|163781856|ref|ZP_02176856.1| flagellar hook protein FlgE [Hydrogenivirga sp. 128-5-R1-1]
 gi|159883076|gb|EDP76580.1| flagellar hook protein FlgE [Hydrogenivirga sp. 128-5-R1-1]
          Length = 494

 Score = 88.0 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 39/205 (19%), Positives = 72/205 (35%), Gaps = 17/205 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  SF   +    A    +   +DN+SN +TV F+  +  F +V+ ++   ++       
Sbjct: 1   MLRSFFNAVTGMDASRFWIDVTSDNLSNVNTVAFKAHRPLFQDVISSVTIGLNVVTGTIK 60

Query: 54  --QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG--IILTRDGRFKVT 109
                + V          +G+F  TG   D A++G   F L+ P     + TRDG+F+++
Sbjct: 61  STTYGAGVVVDSTQKLWNIGNFKQTGVNTDLAIQGRGLFILKDPITGANLYTRDGQFRLS 120

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169
            DG +V++ G Y      +   ++          E+    +        G  S       
Sbjct: 121 RDGYMVTSGGFYLQGFRLNEAGEVVGTGLENIHVEQQLQPR------PTGQMSFLQPTNL 174

Query: 170 VRRENSGISPNIPPTPLEDLSGVTV 194
                       P          T+
Sbjct: 175 NAEAIPPTVAFDPTNTTSYNYKYTI 199



 Score = 83.0 bits (203), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 14/93 (15%), Positives = 33/93 (35%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANS 206
             + K   +  + +      +   ++  +  +    PT L       V+ G LE SN + 
Sbjct: 399 YSNGKSLPLYRVAVAVFTDPEELTKKGANLYTSITTPTILLAGGSEKVRSGMLEMSNVDI 458

Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             E   +I   + + +   +I  +   + E + 
Sbjct: 459 AKEFINLITAQRAYQANARVITTSNTILDETVN 491


>gi|113969606|ref|YP_733399.1| flagellar hook protein FlgE [Shewanella sp. MR-4]
 gi|113884290|gb|ABI38342.1| flagellar basal body FlaE domain protein [Shewanella sp. MR-4]
          Length = 453

 Score = 88.0 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/125 (30%), Positives = 62/125 (49%), Gaps = 5/125 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61
           SFNI L+   A ++ L+T A+N++N +T+GF+  + +F++V       N        VA+
Sbjct: 2   SFNIALSGISAAQKDLNTTANNIANANTIGFKESRAEFADVYANSIFSNSKTAVGGGVAT 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII---LTRDGRFKVTDDGSLVSAS 118
            +       GS   T   LD A++G  +F   S  G +    TR G FKV  +  +V ++
Sbjct: 62  SQVAQQFHQGSLQLTNNSLDLAIKGGGFFVTASEIGTLDHQFTRAGAFKVDKNNYMVDSA 121

Query: 119 GKYPV 123
           G Y  
Sbjct: 122 GNYLQ 126



 Score = 64.9 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 13/91 (14%), Positives = 33/91 (36%), Gaps = 5/91 (5%)

Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMY 208
            ++ + L      QG  +  N+    ++   P         +  ++    LE SN +   
Sbjct: 361 PLSRVALVRFANEQGLTQVGNTSWKASLESGPALAGEPNSGTFGSISSSALEQSNIDLTT 420

Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           E+  +I   + F + +  ++ N       ++
Sbjct: 421 ELVDLISAQRNFQANSRTLEVNNTLQQTVLQ 451


>gi|78355345|ref|YP_386794.1| flagella basal body rod domain-containing protein [Desulfovibrio
           desulfuricans subsp. desulfuricans str. G20]
 gi|78217750|gb|ABB37099.1| flagella basal body rod domain protein [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
          Length = 501

 Score = 88.0 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 48/128 (37%), Gaps = 8/128 (6%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG--------AIKNDIDQK 55
           S  IG        Q +  + +N++N +TVGF+   + + ++               + Q+
Sbjct: 5   SLYIGATGMKTHSQGMQVIGNNLANINTVGFKQSMMLYQDLTSLDVTTGGNNPTVGMSQQ 64

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115
               +  +  +    G F  + T  D A+ G  +F +        TR G F+   +G LV
Sbjct: 65  GMGASVAEVRVLHTAGGFEPSNTVTDLAISGKGFFQVAQGDKTHYTRAGNFRFDLEGYLV 124

Query: 116 SASGKYPV 123
              G    
Sbjct: 125 DPGGYRLQ 132



 Score = 71.4 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 19/133 (14%), Positives = 45/133 (33%), Gaps = 5/133 (3%)

Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170
            G   S+S  +   +  +    +    +   V      + +   +  + L+      G  
Sbjct: 365 TGYEGSSSNLHRTQNGYAQGGLMSLAIDSEGVMSGKFSNGQVVDLYQIPLFRFTSEFGLR 424

Query: 171 RRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225
           R   +  S        ++      +  +V    LE SN ++  E   MI   + F S + 
Sbjct: 425 REGGNHFSATRESGEAQEGTAKTENFGSVAASTLEMSNVDASREFVNMIITQRGFQSQSK 484

Query: 226 LIDENEKSMLEAI 238
           ++   +  + +A+
Sbjct: 485 VVTTADTMLQKAL 497


>gi|126175146|ref|YP_001051295.1| flagellar hook protein FlgE [Shewanella baltica OS155]
 gi|125998351|gb|ABN62426.1| flagellar basal body FlaE domain protein [Shewanella baltica OS155]
          Length = 460

 Score = 88.0 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 5/125 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61
           SFNI L+   A ++ L+T A+N++N +T+GF+  + +F++V       N        VA+
Sbjct: 2   SFNIALSGIAAAQKDLNTTANNIANANTIGFKESRAEFADVYANSIFSNAKTAVGGGVAT 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI---ILTRDGRFKVTDDGSLVSAS 118
            +       GS   T   LD A++G  +F   S  G      TR G FKV  +  +V ++
Sbjct: 62  SQVAQQFHQGSLQLTNNSLDMAIKGGGFFVTSSELGTLDHAFTRAGAFKVDSNNYMVDSA 121

Query: 119 GKYPV 123
           G Y  
Sbjct: 122 GNYLQ 126



 Score = 64.5 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 14/90 (15%), Positives = 33/90 (36%), Gaps = 5/90 (5%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYE 209
           +A + L      QG  +  N+    ++   P         +  ++    LE SN +   E
Sbjct: 369 LARVALVRFANEQGLTQVGNTSWKASLASGPALAGEANSGTFGSISSSALEQSNIDLTTE 428

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +  +I   + F + +  ++ N       ++
Sbjct: 429 LVDLISAQRNFQANSRTLEVNNTLQQTVLQ 458


>gi|303326942|ref|ZP_07357384.1| flagellar hook protein FlgE [Desulfovibrio sp. 3_1_syn3]
 gi|302862930|gb|EFL85862.1| flagellar hook protein FlgE [Desulfovibrio sp. 3_1_syn3]
          Length = 817

 Score = 87.6 bits (215), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 56/127 (44%), Gaps = 5/127 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG---AIKNDIDQKISFVA 60
           S    ++  LA   +++ V +N++N  T+GF++ ++ F++ +    +  +   Q  + V+
Sbjct: 6   SMWTSVSGLLAHGNKMNLVGNNIANVSTIGFKSQRMDFNDYLYMSGSSASGPTQIGAGVS 65

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESP--RGIILTRDGRFKVTDDGSLVSAS 118
           +         G+  +T +  D A++G+ +F +          TR G F    +  LV+  
Sbjct: 66  TYAVLGDYSQGALETTNSGTDLAIDGNGYFGVRKTGSDQKYYTRAGDFFFDKERKLVNPE 125

Query: 119 GKYPVLD 125
           G      
Sbjct: 126 GMVVQGW 132



 Score = 73.0 bits (177), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 18/128 (14%), Positives = 38/128 (29%), Gaps = 5/128 (3%)

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
           ++  +    D  +       + +   +      +     +  + +Y    +QG  R   +
Sbjct: 686 TSVTQNATQDGYASGTLSDVRIDTSGIIYGVYSNGTTLPLYQITMYDFQNNQGLWREGGN 745

Query: 176 GISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
             S                   T K   +E SN +   E  QMI   + F + +  I   
Sbjct: 746 LFSSTNDSGEPRIGVAGDNGFGTTKAYNIEQSNVDMSREFVQMITTQRGFQANSKGITTV 805

Query: 231 EKSMLEAI 238
           +  +   I
Sbjct: 806 DTMLETVI 813


>gi|117919772|ref|YP_868964.1| flagellar hook protein FlgE [Shewanella sp. ANA-3]
 gi|117612104|gb|ABK47558.1| GCN5-related N-acetyltransferase [Shewanella sp. ANA-3]
          Length = 453

 Score = 87.6 bits (215), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/125 (30%), Positives = 62/125 (49%), Gaps = 5/125 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61
           SFNI L+   A ++ L+T A+N++N +T+GF+  + +F++V       N        VA+
Sbjct: 2   SFNIALSGISAAQKDLNTTANNIANANTIGFKESRAEFADVYANSIFSNSKTAVGGGVAT 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII---LTRDGRFKVTDDGSLVSAS 118
            +       GS   T   LD A++G  +F   S  G +    TR G FKV  +  +V ++
Sbjct: 62  SQVAQQFHQGSLQLTNNSLDLAIKGGGFFVTASEIGTLDHQFTRAGAFKVDKNNYMVDSA 121

Query: 119 GKYPV 123
           G Y  
Sbjct: 122 GNYLQ 126



 Score = 64.9 bits (156), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 33/91 (36%), Gaps = 5/91 (5%)

Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMY 208
            +A + L      QG  +  N+    ++   P         +  ++    LE SN +   
Sbjct: 361 PLARVALVRFANEQGLTQVGNTSWKASLSSGPALAGEPNSGTFGSLSSSALEQSNIDLTT 420

Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           E+  +I   + F + +  ++ N       ++
Sbjct: 421 ELVDLISAQRNFQANSRTLEVNNTLQQTVLQ 451


>gi|86157813|ref|YP_464598.1| hypothetical protein Adeh_1387 [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85774324|gb|ABC81161.1| conserved hypothetical protein [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 428

 Score = 87.6 bits (215), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 37/137 (27%), Positives = 55/137 (40%), Gaps = 5/137 (3%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-KNDIDQKISFVA 60
            T+ + G     A    LS V DN++N +TVGF++ +  F + +         Q      
Sbjct: 4   LTALSSGTTGLQASSLELSVVGDNIANANTVGFKSGRAAFEDALSQTVIGGSGQVGLGAR 63

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG----IILTRDGRFKVTDDGSLVS 116
                     G+  STG   D AL+G+ +F +            TRDG+F V DDG LV+
Sbjct: 64  LAGVQKILTQGALASTGLATDLALQGNGFFVVRGAHAGQTGTFYTRDGQFTVDDDGYLVN 123

Query: 117 ASGKYPVLDMASVPIQI 133
             G       A     +
Sbjct: 124 LEGLRVQGFPADPSGAV 140



 Score = 77.2 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 22/161 (13%), Positives = 47/161 (29%), Gaps = 9/161 (5%)

Query: 83  ALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNV 142
           A      F+   P     T           S  +  G+          +++  +  I  V
Sbjct: 268 AAPQPLDFSFGDPTSAGGTGLAGVTQFSATSASTFIGQDGYGSGQLASVRVGPEGVISGV 327

Query: 143 GEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG-ISPNIPPTP----LEDLSGVTVKRG 197
              G+     +V+  + +          R   +          P           ++  G
Sbjct: 328 FTNGQ----TRVLGQVAVAGFAAPDQLDRAGGNLLQQTPGSGQPVVGAAGAGGRASIVAG 383

Query: 198 FLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            LE SN +   +  ++I   + F + +  I   ++ + E I
Sbjct: 384 SLEQSNVDLAEQFVRLIAAQRAFQANSKTITTADQLLSELI 424


>gi|308050024|ref|YP_003913590.1| flagellar hook-basal body protein [Ferrimonas balearica DSM 9799]
 gi|307632214|gb|ADN76516.1| flagellar hook-basal body protein [Ferrimonas balearica DSM 9799]
          Length = 407

 Score = 87.6 bits (215), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/201 (19%), Positives = 68/201 (33%), Gaps = 11/201 (5%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SFNI L+   +  Q L+T+++N++N  T GFR  + +F+           Q      +  
Sbjct: 2   SFNIALSGLRSTSQDLNTISNNIANVSTPGFRGSRTEFAS-----VYAGGQGGGVAVANV 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPV 123
                  G  + TG ELD A+ G  +F   +      TR G F    DG +V + G    
Sbjct: 57  SQNFNTGGDVLYTGRELDMAISGSGFFMTNNQGTTTYTRSGMFAQDKDGYVVDSHGGKLQ 116

Query: 124 LDMASVPIQIPQKDEIFNVGEKGE-----ISQKGKVIATMGLYSVDMSQGFVRRENS-GI 177
                   Q+          + G       +  G V+             F   + S   
Sbjct: 117 GYQVGPNGQLLTGAVTDLQVQTGSLPANATTSMGLVLNLDSRNDAVDPANFDPADASTYH 176

Query: 178 SPNIPPTPLEDLSGVTVKRGF 198
           + N         +   + + +
Sbjct: 177 ALNSTKIYDSLGNEHNLTQYY 197



 Score = 70.3 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 57/158 (36%), Gaps = 10/158 (6%)

Query: 85  EGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE 144
           +G+      S   I L+ +G  +   D   V++  +          I+I     ++ V  
Sbjct: 251 DGNPILDGSSALDISLSFNGATQFGSD-FAVASMRQDGYSSGELSGIRIDDNGMLYGVYT 309

Query: 145 KGEISQKGKVIATMGLYSVDMSQGFVRRENSGI-SPNIPPTPLE----DLSGVTVKRGFL 199
            G+   +G+VI    L +     G  +  N+   +      P+       +  ++  G +
Sbjct: 310 NGQDQLQGQVI----LANFANPNGLQQVGNTAWTATFASGQPVTGAAGTGTMGSLTAGAI 365

Query: 200 EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
           E SN +   E+  ++   + + S   +I   +K     
Sbjct: 366 EGSNVDLTGELVNLMTAQRNYQSNAKVISTQDKLTQAL 403


>gi|37681979|gb|AAQ97867.1| FlgG [Photorhabdus luminescens]
          Length = 150

 Score = 87.6 bits (215), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 20/147 (13%), Positives = 45/147 (30%), Gaps = 6/147 (4%)

Query: 99  ILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIAT 157
             TRDG F+   +G L +A+G      +                V  K +     + +  
Sbjct: 3   AYTRDGSFQEDQNGQLTTANGFLIFPTITIPDNATDLTISSDGIVSVKVQGQSVPQQVGQ 62

Query: 158 MGLYSVDMSQGFVRRENSGISPNIP-----PTPLEDLSGVTVKRGFLEDSNANSMYEMGQ 212
             L +     G      +                       ++  ++E SN N   E+  
Sbjct: 63  FTLTTFINDSGLESIGENLYVETSSSGVPIENTPGINGAGLLQHKYVETSNVNIAEELVN 122

Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIR 239
           MI   + +   +  +  +++ + +  +
Sbjct: 123 MIQTQRAYEVNSKAVSTSDQMLQKLTQ 149


>gi|258511381|ref|YP_003184815.1| fagellar hook-basal body protein [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
 gi|257478107|gb|ACV58426.1| fagellar hook-basal body protein [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
          Length = 335

 Score = 87.6 bits (215), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 32/143 (22%), Positives = 59/143 (41%), Gaps = 24/143 (16%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50
           M  S N  ++   A +  L  V +N++N +TVGF+   V+F++++    +          
Sbjct: 1   MLRSMNSAISGMQAFQTDLDVVGNNIANVETVGFKQSDVQFADLLSQTMSLGTAGTAPNP 60

Query: 51  --------------DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR 96
                         + +Q    V      +    G   +TG   + A++G+ +F + +  
Sbjct: 61  GTGSSGATTGIGGTNPEQVGLGVQVAATQMDMSQGPDETTGVPTNVAIQGNGFFVVTNGT 120

Query: 97  GIILTRDGRFKVTDDGSLVSASG 119
              LTR G F V   G+LV  +G
Sbjct: 121 STYLTRAGNFSVDSAGNLVLPNG 143



 Score = 58.3 bits (139), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 20/118 (16%), Positives = 39/118 (33%), Gaps = 6/118 (5%)

Query: 128 SVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP---- 183
                +     +      G  S +  V+  + L  V   QG V   ++  S + P     
Sbjct: 214 GANGALTATLTLTPSSGSGSPSTQTVVLGYLALAQVPNPQGLVSVGDNLFSASSPAAGTP 273

Query: 184 --TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
                   +  T+  G LE SN +   +  +MI     + + T +I  +   +   + 
Sbjct: 274 TYWTPGQGTYGTLASGELEGSNVDLSQQFAEMIVAQNAYVANTHMIGTDNAILQALVN 331


>gi|254439743|ref|ZP_05053237.1| conserved domain protein [Octadecabacter antarcticus 307]
 gi|198255189|gb|EDY79503.1| conserved domain protein [Octadecabacter antarcticus 307]
          Length = 1412

 Score = 87.6 bits (215), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 71/170 (41%), Gaps = 5/170 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG--AIKNDIDQKISFVAS 61
           SF   L      +  ++  ++N++N  T GF+  + +F ++     ++N      S    
Sbjct: 2   SFYTALTGLNGAQADIAASSNNIANVGTTGFKLSRAEFGDIFATSPLQNSTSSIGSGAIL 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALES---PRGIILTRDGRFKVTDDGSLVSAS 118
                    G+  ++   LD A+ G  +FAL+       ++ TR+G F V ++ ++V +S
Sbjct: 62  KGVKQQFTQGNISASLNALDMAISGQGFFALKPSLTSTQVVYTRNGSFNVDNNRNVVDSS 121

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
           G++ +    +    +  KD    V  +  ++       T    +V++   
Sbjct: 122 GQFLLTYPVNEDGSVTAKDIDSAVPLRLPVTSGDPQGTTKVDLAVNVPAN 171



 Score = 80.3 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 17/162 (10%), Positives = 44/162 (27%), Gaps = 6/162 (3%)

Query: 84   LEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG-KYPVLDMASVPIQIPQKDEIFNV 142
            L           +    +       +    L +         +  +         +   +
Sbjct: 1248 LISPQGLTRYDSQSETFSISLDIDYSASSQLATPFSVNNLDQNGFTSGRLDGLNIDSNGL 1307

Query: 143  GEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRG 197
                  + + K +  + L + +   G  +  N+                 T     ++ G
Sbjct: 1308 LRANYTNGQNKPLGKIVLANFNNQNGLKQVGNATFVETASSGEPIIGEAGTEGFGSIQSG 1367

Query: 198  FLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             LE SN +   E+  +I   + F + +  I+ + +     I 
Sbjct: 1368 ALERSNVDITEELVNLITAQRNFQASSKAIETSTQLTQTIIN 1409


>gi|114562342|ref|YP_749855.1| flagellar hook protein FlgE [Shewanella frigidimarina NCIMB 400]
 gi|114333635|gb|ABI71017.1| flagellar basal body FlaE domain protein [Shewanella frigidimarina
           NCIMB 400]
          Length = 459

 Score = 87.6 bits (215), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 5/126 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61
           SFNI L+   A ++ L+T A+N++N +T+GF+  + +F++V       N          +
Sbjct: 2   SFNIALSGIAAAQKDLNTTANNIANVNTIGFKESRAEFADVYANSIFSNSKTAVGGGATT 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESP---RGIILTRDGRFKVTDDGSLVSAS 118
            +       GS   T   LD A+ G  +F   S    +    TR G FKV     +V ++
Sbjct: 62  TQVAQQFHQGSLQFTSNSLDMAISGGGFFVTSSELGSQDQSYTRAGAFKVDSSNYMVDSA 121

Query: 119 GKYPVL 124
           G +   
Sbjct: 122 GNFLQG 127



 Score = 65.3 bits (157), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 33/91 (36%), Gaps = 5/91 (5%)

Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMY 208
            ++ + L      QG  +  N+    ++             +  +++   LE SN +   
Sbjct: 367 PLSRVALVRFANEQGLTQVGNTSWKASLDSGAALAGEANSGTFGSIRSSALEQSNVDLTT 426

Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           E+  +I   + F + +  ++ N       ++
Sbjct: 427 ELVDLISAQRNFQANSRTLEVNNTLNQTILQ 457


>gi|220904530|ref|YP_002479842.1| hypothetical protein Ddes_1261 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219868829|gb|ACL49164.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           desulfuricans subsp. desulfuricans str. ATCC 27774]
          Length = 808

 Score = 87.6 bits (215), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 74/215 (34%), Gaps = 14/215 (6%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA---IKNDIDQKISFVA 60
           S    ++  L+  Q+++ V +N++N  T+GF++ ++ F++ +       +   Q  +  +
Sbjct: 6   SMWTSVSGLLSHGQKMNVVGNNIANVSTLGFKSQRMDFNDYLYRGIGTTSGPSQIGAGAS 65

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR--GIILTRDGRFKVTDDGSLVSAS 118
                     GS  ST +  D A++G+ +F +  P    +  TR G F    D  L +  
Sbjct: 66  VYAILGDFSQGSLESTNSVTDLAIDGNGFFQVRKPNSKQMYYTRAGDFYFNKDRELQNPE 125

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178
           G        +   ++       N+G             T     +D      ++  +   
Sbjct: 126 GYLLQGWKVNNEKKLTFNSGATNLGNTDLSKSAYVGSGTPTDIVLDSWNIIPQQTTNVTF 185

Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQM 213
                   +              SN + M  +  +
Sbjct: 186 TMGLTNDGKGDRTT---------SNTSPMTALFDL 211



 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/208 (12%), Positives = 53/208 (25%), Gaps = 8/208 (3%)

Query: 39  VKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98
              +              S   +  E  +  + S  +       +  G   F      G 
Sbjct: 597 AITATAFKPTAYTAPTDASRPVADTETANSSLASLTTMSRVSGTSPTGVPVFENVINYGT 656

Query: 99  ILTRDGRFKVTDDGSLVSASGKYPV---LDMASVPIQIPQKDEIFNVGEKGEISQKGKVI 155
            +      +  +  S+ + +         D  +         +   V      + K   +
Sbjct: 657 TIPTMTAVERQEYASVANTTSYTVQNRTQDGYASGTLSNVNIDNGGVVYGIYSNGKTIPL 716

Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEM 210
             + LY     QG  R   +  S        +            K   +E SN +   E 
Sbjct: 717 YQIALYDFQNHQGLYREGGNLFSATNDSGEPQLGVAGDNGFGKTKAYNIEQSNVDMTTEF 776

Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAI 238
            QMI   + F + +  I   +  +   I
Sbjct: 777 VQMISTQRGFQANSKGITTVDTMLETVI 804


>gi|94968673|ref|YP_590721.1| flagellar basal body FlaE [Candidatus Koribacter versatilis
           Ellin345]
 gi|94550723|gb|ABF40647.1| flagellar basal body FlaE [Candidatus Koribacter versatilis
           Ellin345]
          Length = 409

 Score = 87.2 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/128 (26%), Positives = 56/128 (43%), Gaps = 5/128 (3%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-----QKI 56
              F+I L+   A    L+T+A+N++N +T+G++  +  F ++              Q  
Sbjct: 1   MPMFSIPLSGLTASSTALATIANNLANQNTIGYKQTRALFRDLFYQQIGQTGSGDPIQVG 60

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVS 116
           +    G    +   GS   TG   D A+ GD +F  +     I TR G FKV  DG+L +
Sbjct: 61  AGTMIGTIDTNFTDGSVSPTGVPTDVAIMGDGFFVAQQNGNDIYTRAGNFKVGADGTLRT 120

Query: 117 ASGKYPVL 124
             G   + 
Sbjct: 121 QDGAVVLG 128



 Score = 70.3 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 17/121 (14%), Positives = 36/121 (29%), Gaps = 5/121 (4%)

Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183
            D     +            E    + K  +I  + + S    QG  +   +     +  
Sbjct: 286 QDGYGSGMLQNFNIGADGTIEGTFSNGKTSIIGQIAIASFPNVQGLRKVGQNAYVGTLAS 345

Query: 184 TPLEDLSGVTVKRG-----FLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
                 +  +  RG      LE SN +   E   +I   + + +   +I   ++   + I
Sbjct: 346 GQAALGAPGSGGRGTLGGGALELSNVDMATEFSNLIVAQRGYQANAKVITTFDEITQDTI 405

Query: 239 R 239
            
Sbjct: 406 N 406


>gi|161526186|ref|YP_001581198.1| flagellar hook protein FlgE [Burkholderia multivorans ATCC 17616]
 gi|189349098|ref|YP_001944726.1| flagellar hook protein FlgE [Burkholderia multivorans ATCC 17616]
 gi|160343615|gb|ABX16701.1| flagellar basal body FlaE domain protein [Burkholderia multivorans
           ATCC 17616]
 gi|189333120|dbj|BAG42190.1| flagellar hook protein [Burkholderia multivorans ATCC 17616]
          Length = 414

 Score = 87.2 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 63/189 (33%), Gaps = 2/189 (1%)

Query: 8   GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVASGKEY 65
           GL+        L  + +N++N +TVGF++   +FS++           Q     A     
Sbjct: 6   GLSGLAGASNALDVIGNNIANANTVGFKSSTAQFSDMYANSIATSVNTQIGIGTALASVQ 65

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125
                G+  +T + LD A+ G+ +F + +   I  TRDG F+   +G +V++ G   +  
Sbjct: 66  QQFGQGTINTTNSSLDVAINGNGFFQMSNNGTITYTRDGTFQRDKNGYIVNSQGLNLMGY 125

Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185
            A     I     +        I+       T             +              
Sbjct: 126 AADKNGVINTAQTVPLQAPTTNIAPTATTKITGQFNLNSQDTVPTKTPFDATDTTTYNYS 185

Query: 186 LEDLSGVTV 194
                  ++
Sbjct: 186 TSIQVYDSL 194



 Score = 67.6 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 13/125 (10%), Positives = 35/125 (28%), Gaps = 5/125 (4%)

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                D  +                    + +  V+  + L + +   G V    +  + 
Sbjct: 289 NNLAQDGYASGTLATFTIGTDGKVTGNYSNGQTAVLGQIALANFNNPNGLVNIGGNQYAE 348

Query: 180 NIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
                  +       +  T++   LE+SN +   ++  +I   + + +    I   +   
Sbjct: 349 TAASGVPQISVPGSTNHGTLQGSALENSNVDLTSQLVNLITAQRNYQANAQTIKTQQTVD 408

Query: 235 LEAIR 239
              I 
Sbjct: 409 QTLIN 413


>gi|260767769|ref|ZP_05876704.1| flagellar hook protein FlgE [Vibrio furnissii CIP 102972]
 gi|260617278|gb|EEX42462.1| flagellar hook protein FlgE [Vibrio furnissii CIP 102972]
 gi|315179399|gb|ADT86313.1| flagellar hook protein FlgE [Vibrio furnissii NCTC 11218]
          Length = 434

 Score = 87.2 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 31/171 (18%), Positives = 65/171 (38%), Gaps = 6/171 (3%)

Query: 6   NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGK 63
            + L+   A +  L+T ++N++N +T GF+  + +F +V       N        V + K
Sbjct: 3   YVSLSGLSAAQLDLNTTSNNIANANTFGFKESRAEFGDVYSNSLFTNAKTTPGGGVQANK 62

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWF----ALESPRGIILTRDGRFKVTDDGSLVSASG 119
                  GS I T   +D  + G  +F        P+   LTR+G F +  +  +V+++ 
Sbjct: 63  VAQQFHEGSSIYTNNPMDLRISGTGFFAVAKDRLVPQQNELTRNGAFHLDKNNYMVTSND 122

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170
           +Y +    +         E   +    E  +  +        ++  +    
Sbjct: 123 EYLLGYQVNPDTGDVLSYEPAPLNIPAEFGKPKQTSNIEVGVNLPANGDLK 173



 Score = 66.8 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 34/98 (34%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI-----PPTPLEDLSGVTVKRGFLED 201
             + +   +  + L  V   QG  ++  +                   S  T+  G LE 
Sbjct: 335 YSNGENITLGRVALVRVPNEQGLDKKGGTQWDSTQFSGDKIWGESNKGSFGTINNGTLEQ 394

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E+  +I   + F + +  ++ + +     ++
Sbjct: 395 SNIDMTQELVDLISAQRNFQANSRALEVHNQLQQNILQ 432


>gi|238028849|ref|YP_002913080.1| flagellar hook protein FlgE [Burkholderia glumae BGR1]
 gi|237878043|gb|ACR30376.1| Hypothetical protein bglu_1g33140 [Burkholderia glumae BGR1]
          Length = 412

 Score = 87.2 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 65/189 (34%), Gaps = 2/189 (1%)

Query: 8   GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG--KEY 65
           GL+        L  + +N++N +TVGF+    +FS++     +        + +      
Sbjct: 6   GLSGLQGASSDLDVIGNNIANANTVGFKAASAQFSDLYANSVSGAVANGIGIGTQLATVA 65

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125
              + G F ++   L  A+ G+ +F + S      TRDG+F     G++ +++G   +  
Sbjct: 66  QVFQQGGFATSQNPLSMAISGNGFFQVNSNGVTTYTRDGQFSPNASGNITNSAGGQLMGY 125

Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185
             +    I     +     +G I  K     T                 +    +     
Sbjct: 126 GVNADGSINTSAIVPLTAPQGNIPPKATSSITGQFNLSTTDTAQTNSPFNFSDSSTYTLK 185

Query: 186 LEDLSGVTV 194
               +  ++
Sbjct: 186 QPVQAYDSL 194



 Score = 62.2 bits (149), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 9/98 (9%), Positives = 29/98 (29%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLED 201
             + +   +  + + + +  QG      +           +       +  T+K    E+
Sbjct: 314 YSNGQSMKLGQVFVVNFNDPQGLTSIGGNQYIQTAASGVPQIGVPGSTNHGTIKGSTTEN 373

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           S  +   E+  +I   + + +    I   +      + 
Sbjct: 374 STVDLTGELVNLITAQRNYQANAQTIKTQQTVDQTLLN 411


>gi|2832235|gb|AAC01569.1| flagellar hook [Brucella abortus]
          Length = 396

 Score = 87.2 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 5/123 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M      G++   A   RLSTVADN++N  TVG++  + +FS +V           S V 
Sbjct: 6   MMR---TGVSGMNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAGQYNSGS-VL 61

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASG 119
           +   Y   + G   ST +  D A++G+ +F ++ P G    TR G F    +G LV+++G
Sbjct: 62  TDVRYGISDQGGIRSTSSTTDLAIDGNGYFVVQGPGGSTYLTRAGSFVPDKNGDLVNSAG 121

Query: 120 KYP 122
            Y 
Sbjct: 122 YYL 124



 Score = 67.2 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 22/54 (40%)

Query: 186 LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +      +  G LE+SNA+   E+  MI   + + + + +     + M   + 
Sbjct: 340 PQGDGMGKIMSGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGFELMDVLVN 393


>gi|291613038|ref|YP_003523195.1| fagellar hook-basal body protein [Sideroxydans lithotrophicus ES-1]
 gi|291583150|gb|ADE10808.1| fagellar hook-basal body protein [Sideroxydans lithotrophicus ES-1]
          Length = 405

 Score = 87.2 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 60/132 (45%), Gaps = 2/132 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61
            F  GL+   A  + L  + +N++N  TVGF+  + +F++V  +    +   Q       
Sbjct: 2   GFQQGLSGLNAASKSLDVIGNNVANASTVGFKQSQAQFADVYASSMAGSSGGQAGIGTRV 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
                    G+  +T   LD A+ G  +F +++   I  +R+G+F++  +G +V++ G  
Sbjct: 62  ATVAQQFTQGNITTTNNSLDMAVSGSGFFRMDNNGSITFSRNGQFQLDKNGFIVNSQGYK 121

Query: 122 PVLDMASVPIQI 133
               + +    I
Sbjct: 122 LTGFLPNAAGAI 133



 Score = 71.1 bits (172), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 15/125 (12%), Positives = 38/125 (30%), Gaps = 5/125 (4%)

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                D  +             +      + + K +A + L +   +QG     N+    
Sbjct: 279 NSLSQDGYTSGHMTGFSTGSDGIVTGRYSNGQTKTLAQVVLANFSNAQGLQPLGNNQWVE 338

Query: 180 NIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
                     +  +     ++   +EDSN +   E+  MI   + + +    I   ++ +
Sbjct: 339 TSTSGTPLVGAPGSASLGVLQTSAVEDSNVDLTAELVNMITAQRVYQANAQTIKTQDQVL 398

Query: 235 LEAIR 239
              + 
Sbjct: 399 QTIVN 403


>gi|24374758|ref|NP_718801.1| flagellar hook protein FlgE [Shewanella oneidensis MR-1]
 gi|24349424|gb|AAN56245.1|AE015762_2 flagellar hook protein FlgE [Shewanella oneidensis MR-1]
          Length = 453

 Score = 87.2 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/125 (29%), Positives = 62/125 (49%), Gaps = 5/125 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61
           SFNI L+   A ++ L+T A+N++N +T+GF+  + +F++V       N        VA+
Sbjct: 2   SFNIALSGISAAQKDLNTTANNIANANTIGFKESRAEFADVYANSIFSNSKTAVGGGVAT 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII---LTRDGRFKVTDDGSLVSAS 118
            +       GS   T   LD A++G  +F   S  G +    TR G FKV  +  +V ++
Sbjct: 62  SQVAQQFHQGSLQLTNNSLDLAIKGGGFFVTASEIGTLDHQFTRAGAFKVDKNNYMVDSA 121

Query: 119 GKYPV 123
           G +  
Sbjct: 122 GNFLQ 126



 Score = 64.9 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 33/91 (36%), Gaps = 5/91 (5%)

Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMY 208
            +A + L      QG  +  N+    ++   P         +  ++    LE SN +   
Sbjct: 361 PLARVALVRFANEQGLTQVGNTSWKASLSSGPALAGEPNSGTFGSLSSSALEQSNIDLTT 420

Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           E+  +I   + F + +  ++ N       ++
Sbjct: 421 ELVDLISAQRNFQANSRTLEVNNTLQQTVLQ 451


>gi|329901230|ref|ZP_08272755.1| Flagellar hook protein flgE [Oxalobacteraceae bacterium IMCC9480]
 gi|327549162|gb|EGF33754.1| Flagellar hook protein flgE [Oxalobacteraceae bacterium IMCC9480]
          Length = 407

 Score = 87.2 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 81/202 (40%), Gaps = 7/202 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA--IKNDIDQKISFVAS 61
            F  GL+   A  + L    +N++N+ TVGF++ + +F++V  +        Q     + 
Sbjct: 2   GFQQGLSGLNAASKSLEVTGNNVANSSTVGFKSAQAQFADVYASSLTGGGASQVGIGTSV 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
                    G+  ++   LD A+ G  +F L +   I  +R+G+F++  +G +V+++G +
Sbjct: 62  ATVAQQFTQGNVTASNNPLDLAINGGGFFRLSTGGAITYSRNGQFQLDKNGGIVNSNGAH 121

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGK-----VIATMGLYSVDMSQGFVRRENSG 176
                 S    +        V    +++ K       ++      +   +  F   + + 
Sbjct: 122 LTGFGVSATGVLATGTPSNLVINTADLAPKTTSEVKLLVNLDSRETTPKTTTFSATDPTS 181

Query: 177 ISPNIPPTPLEDLSGVTVKRGF 198
            + +   +  + L    V + +
Sbjct: 182 YNRSTSVSVFDSLGNSHVLQSY 203



 Score = 76.4 bits (186), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 13/98 (13%), Positives = 31/98 (31%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLED 201
             + K   +  + L +     G     N+  S                +   ++   +ED
Sbjct: 308 YTNGKSATLGQVVLSNFTNPNGLQNLGNNVWSETAASGGPLVGTPNSGNLGVLQSSAVED 367

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E+  MI   + + +    I   ++ +   + 
Sbjct: 368 SNVDLTAELVNMITAQRFYQANAQTIKTQDQVLQTLVN 405


>gi|254720773|ref|ZP_05182584.1| flagellar hook protein FlgE [Brucella sp. 83/13]
 gi|265985831|ref|ZP_06098566.1| flagellar hook protein flgE [Brucella sp. 83/13]
 gi|306840136|ref|ZP_07472921.1| flagellar hook protein FlgE [Brucella sp. NF 2653]
 gi|264664423|gb|EEZ34684.1| flagellar hook protein flgE [Brucella sp. 83/13]
 gi|306404781|gb|EFM61075.1| flagellar hook protein FlgE [Brucella sp. NF 2653]
          Length = 396

 Score = 87.2 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 5/123 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M      G++   A   RLSTVADN++N  TVG++  + +FS +V           S V 
Sbjct: 6   MMR---TGVSGMNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAGQYNSGS-VL 61

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASG 119
           +   Y   + G   ST +  D A++G+ +F ++ P G    TR G F    +G LV+++G
Sbjct: 62  TDVRYGISDQGGIRSTSSTTDLAIDGNGYFVVQGPGGSTYLTRAGSFVPDKNGDLVNSAG 121

Query: 120 KYP 122
            Y 
Sbjct: 122 YYL 124



 Score = 67.6 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 9/54 (16%), Positives = 22/54 (40%)

Query: 186 LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +      +  G LE+SNA+   E+  MI   + + + + +     + +   + 
Sbjct: 340 PQGDGMGKIMSGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGSELIDVLVN 393


>gi|218674739|ref|ZP_03524408.1| flagellar hook protein FlgE [Rhizobium etli GR56]
          Length = 433

 Score = 87.2 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 2/125 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           S    ++   A   RLSTVADN++N +T G++ +   FS +V       +     V +  
Sbjct: 6   SMKTAVSGMNAQANRLSTVADNIANVNTSGYKAVSTSFSSLVLPSSGG-NYNSGGVQTSV 64

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGKYP 122
                + G    T +  D A+ GD +F ++   G  +LTR G F+  D+G+LV+++G   
Sbjct: 65  RQAVSDQGDISYTTSTTDLAISGDGFFIVQGADGTPVLTRAGDFQKDDEGNLVNSAGFQL 124

Query: 123 VLDMA 127
           +    
Sbjct: 125 MGYSY 129



 Score = 71.8 bits (174), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 17/121 (14%), Positives = 35/121 (28%), Gaps = 1/121 (0%)

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178
                  +  V I               +   +  +        + +  G V   N    
Sbjct: 311 NGQAATPVKDVTIDGDGIVYAKYEDGSTKPLYRIPLANVASPDKLTLMSGNVYSANGQSG 370

Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
             +   P  +    T+K G LE SN +   E+ +MI   + + + + +       M   +
Sbjct: 371 VTVTGFPQTNG-LGTIKSGALEGSNVDLAGELTEMIESQRSYTANSKVFQTGSDIMDVLV 429

Query: 239 R 239
            
Sbjct: 430 N 430


>gi|251772436|gb|EES53003.1| probable flagellar hook protein FlgE [Leptospirillum
           ferrodiazotrophum]
          Length = 458

 Score = 87.2 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/187 (19%), Positives = 74/187 (39%), Gaps = 7/187 (3%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN------DIDQK 55
            +S  +  +   A+   +S + +N+SN +T GF+  +  F+ + G             Q 
Sbjct: 4   LSSMYVANSGLSAMGTDMSVIGNNISNMNTNGFKAGRAVFANIYGQTLAGKSNAVGPSQP 63

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSL 114
            S V           GS  +T   LD A++G+ +F+  + +  I+  R+G   +  +G +
Sbjct: 64  GSGVYVESIEPLFTQGSVQTTSNALDLAIQGNGFFSFRNRQGAILYGRNGALSLDRNGRI 123

Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174
           V   G      MA    +I  K    +V +     +  + + +      +M++     + 
Sbjct: 124 VDQGGHILQGYMADARGKILPKVRDLSVPQSTIPPKASQNVYSRINLDANMTEKLKTGKT 183

Query: 175 SGISPNI 181
              S NI
Sbjct: 184 FSKSSNI 190



 Score = 67.2 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 14/95 (14%), Positives = 31/95 (32%), Gaps = 5/95 (5%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLEDSNANSM 207
             +  + + + +   G V    +    +I                 V    LE SN +  
Sbjct: 364 HNLGAIAVSTFNNPNGLVSVGANLYKESIGSGIANIGRAGQGGRGQVLANSLEQSNVDLG 423

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            +M  MI   + + +  ++I  + + M   +  I 
Sbjct: 424 RQMIDMISAERGYQANASVISADNQLMNTLLTRIG 458


>gi|82702453|ref|YP_412019.1| flagellar hook protein FlgE [Nitrosospira multiformis ATCC 25196]
 gi|82410518|gb|ABB74627.1| conserved hypothetical protein [Nitrosospira multiformis ATCC
           25196]
          Length = 406

 Score = 87.2 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 60/133 (45%), Gaps = 2/133 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN--DIDQKISFVAS 61
           SF  GL+   A  + L  + +N++NT+TVGF+  + +F+++     +     Q    V  
Sbjct: 2   SFQQGLSGLNAASKNLDVIGNNVANTNTVGFKQSQAQFADMFANSLSGGGGTQAGIGVKL 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
                    GS   +    D A+ G  ++ L     I  +R+G+F    DG +V++SG  
Sbjct: 62  AGIAQQFSQGSITVSNNPFDIAISGAGFYRLSDQGTISYSRNGQFHPDKDGYIVNSSGLR 121

Query: 122 PVLDMASVPIQIP 134
               MA+   QI 
Sbjct: 122 LTGYMANSTGQIN 134



 Score = 74.1 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 14/90 (15%), Positives = 29/90 (32%), Gaps = 5/90 (5%)

Query: 155 IATMGLYSVDMSQGFVRRENSGI-----SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYE 209
           +  + L +    QG     N+       S               ++ G +EDSN     E
Sbjct: 315 MGQIALANFANPQGLQAVGNNTWKESAASGAALVAAPATGGLGVLQAGAVEDSNVELTSE 374

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +  MI   + + +    I   ++ +   + 
Sbjct: 375 LVNMITAQRVYQANAQTIKTQDQILQTVVN 404


>gi|254470088|ref|ZP_05083492.1| flagellar hook protein [Pseudovibrio sp. JE062]
 gi|211960399|gb|EEA95595.1| flagellar hook protein [Pseudovibrio sp. JE062]
          Length = 561

 Score = 87.2 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 67/200 (33%), Gaps = 8/200 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF-VASG 62
           + N       A  + L  ++ N++N+ T G++ +   FS++V +  +   +++S  V + 
Sbjct: 6   AINSATTGLDAQSKALENISGNVANSSTTGYKRLDTSFSDLVSSTGSRQAEQVSGTVIAT 65

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFAL-------ESPRGIILTRDGRFKVTDDGSLV 115
               +   G   S       A+ G  +F +       +       TR G F++  + +LV
Sbjct: 66  SRATNYLSGDITSADRNTYMAINGPGYFLVTNRDGLGQETPESFYTRAGDFELDTERNLV 125

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
           +++G +      +          +        +  +                    ++  
Sbjct: 126 NSAGYFLQGYPINPATGAVSDRAVPIQVSDAPMPAQPSTQINYQANLPSKPTTANYQKTD 185

Query: 176 GISPNIPPTPLEDLSGVTVK 195
           G + +    P        ++
Sbjct: 186 GAANSQYVDPSVFAEPHELQ 205



 Score = 69.1 bits (167), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 12/78 (15%), Positives = 31/78 (39%)

Query: 162 SVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221
           +        R + +  S        +  +G T++   LE SNA+   E  ++I   Q ++
Sbjct: 481 TFAAEHELQRVDGAAFSETSTSGEPDFRNGGTIRAKALESSNADIAKEFSKLIITQQAYS 540

Query: 222 SITTLIDENEKSMLEAIR 239
           + + ++    + +   + 
Sbjct: 541 ANSKVLSTANQMLDSVLN 558


>gi|288962673|ref|YP_003452967.1| flagellar hook protein [Azospirillum sp. B510]
 gi|288914939|dbj|BAI76423.1| flagellar hook protein [Azospirillum sp. B510]
          Length = 427

 Score = 87.2 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 4/135 (2%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
           ++   G++   A   RL+ ++DN+SN+ TVG++   V FS +V A  +      S V S 
Sbjct: 5   SAMRSGVSGMAAQSSRLAAISDNISNSQTVGYKRATVDFSTLVTAPGDRTSYSASGVQSN 64

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALES----PRGIILTRDGRFKVTDDGSLVSAS 118
             Y  ++ G+ + TG+  D A+ GD +F + +         LTR G F   D G L + +
Sbjct: 65  LHYQMQQDGTLLGTGSSTDMAISGDGFFVVGNRATGTPDYALTRAGSFLPDDGGFLRNTA 124

Query: 119 GKYPVLDMASVPIQI 133
           G+Y           +
Sbjct: 125 GQYLQGWKLDPNGNL 139



 Score = 67.6 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 36/92 (39%), Gaps = 5/92 (5%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGI-----SPNIPPTPLEDLSGVTVKRGFLEDSNANSM 207
           + +  + + +V    G V +  +       S  +  +        +V    LE SN +  
Sbjct: 333 QALYQVPVANVTNPDGLVAQTGNTFTLGRDSGTLTLSAGNSGKAGSVVGSALEQSNVDIA 392

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            E+  +I   + ++S  TL+   ++ + E  R
Sbjct: 393 TELVSLIETQRAYSSSATLVRTTDEMVEETTR 424


>gi|242277989|ref|YP_002990118.1| hypothetical protein Desal_0512 [Desulfovibrio salexigens DSM 2638]
 gi|242120883|gb|ACS78579.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           salexigens DSM 2638]
          Length = 529

 Score = 87.2 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 46/132 (34%), Gaps = 5/132 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG- 62
           S   G++   A  Q +S + +N++N +T+GF+  +  F +   +  N             
Sbjct: 6   SMYNGISGIRAHSQAMSIIGNNLANGNTIGFKGARTSFEDSFYSAVNTGGGIGQVGHGVG 65

Query: 63  --KEYLSKEVGSFISTGTELDFALEGDAWFALESPRG--IILTRDGRFKVTDDGSLVSAS 118
               Y   + G F  +    + A+ G  +F +  P       TR G F     G L    
Sbjct: 66  IASIYGDFKQGPFEPSSEATNVAIGGKGFFTVRHPDTDGTYYTRAGNFIFNKQGVLTDPH 125

Query: 119 GKYPVLDMASVP 130
           G        +  
Sbjct: 126 GYVVQGWKVNPN 137



 Score = 79.1 bits (193), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 20/144 (13%), Positives = 50/144 (34%), Gaps = 10/144 (6%)

Query: 102 RDGRFKVT-DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           R   +  + D G+  ++  +          +++ +   +      G++      +  + L
Sbjct: 387 RSASYSTSYDTGNARNSQSQNGYGAGFLQAVEVDRDGVVTGRYSNGQV----LDLYVLTL 442

Query: 161 YSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIH 215
            + +   G  R   +  S      P            ++    LE SN +   EM ++I 
Sbjct: 443 ANFNNQYGLRREGGNLFSSTRDSGPALTGRAGTGPLGSIASNKLEQSNVDVGDEMVKLIT 502

Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239
             + F + +  I   ++ + E I+
Sbjct: 503 TQRGFQANSKAITTADQLLGELIQ 526


>gi|161621182|ref|YP_001595068.1| flagellar hook protein FlgE [Brucella canis ATCC 23365]
 gi|254702383|ref|ZP_05164211.1| flagellar hook protein FlgE [Brucella suis bv. 3 str. 686]
 gi|260568714|ref|ZP_05839183.1| flagellar hook protein FlgE [Brucella suis bv. 4 str. 40]
 gi|261752946|ref|ZP_05996655.1| flagellar hook protein FlgE [Brucella suis bv. 3 str. 686]
 gi|161337993|gb|ABX64297.1| flagellar basal body FlaE domain protein [Brucella canis ATCC
           23365]
 gi|260155379|gb|EEW90460.1| flagellar hook protein FlgE [Brucella suis bv. 4 str. 40]
 gi|261742699|gb|EEY30625.1| flagellar hook protein FlgE [Brucella suis bv. 3 str. 686]
          Length = 396

 Score = 87.2 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 5/123 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M      G++   A   RLSTVADN++N  TVG++  + +FS +V           S V 
Sbjct: 6   MMR---TGVSGMNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAGQYNSGS-VL 61

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASG 119
           +   Y   + G   ST +  D A++G+ +F ++ P G    TR G F    +G LV+++G
Sbjct: 62  TDVHYGISDQGGIRSTSSTTDLAIDGNGYFVVQGPGGSTYLTRAGSFVPDKNGDLVNSAG 121

Query: 120 KYP 122
            Y 
Sbjct: 122 YYL 124



 Score = 68.7 bits (166), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 22/54 (40%)

Query: 186 LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +      +  G LE+SNA+   E+  MI   + + + + +     + M   + 
Sbjct: 340 PQGDGMGKIMSGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGSELMDVLVN 393


>gi|302343734|ref|YP_003808263.1| fagellar hook-basal body protein [Desulfarculus baarsii DSM 2075]
 gi|301640347|gb|ADK85669.1| fagellar hook-basal body protein [Desulfarculus baarsii DSM 2075]
          Length = 786

 Score = 86.8 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 36/92 (39%), Gaps = 5/92 (5%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGI-SPNIPPTPLE----DLSGVTVKRGFLEDSNANSM 207
           K +  + L      +G  R  ++          P+E         +++ G LE SN +  
Sbjct: 692 KTLGQVMLVDFANPEGLAREGDNLWSQTTKSGEPIENTPGQGGTGSIESGALEQSNVDLA 751

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            EM +MI   + + + +  I   ++ + E I 
Sbjct: 752 TEMVKMILYQRAYQANSKSISTTDQMLQELIN 783



 Score = 82.2 bits (201), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 36/181 (19%), Positives = 67/181 (37%), Gaps = 8/181 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M T+   G+A      Q LS VADN++N +T G++  +V F +V+          ++ V 
Sbjct: 3   MLTAMWAGVAGLNVHGQALSAVADNVANVNTHGYKASRVNFGDVMIHSLTVGGTVVNQVG 62

Query: 61  SGKEY----LSKEVGSFISTGTELDFALEGDAWFALES----PRGIILTRDGRFKVTDDG 112
           +G +          GSF +T    D A+ G  +F + +          TR G+F +  +G
Sbjct: 63  TGAKVLSVQNLLTQGSFETTDVPTDMAINGGGFFQVNNTSAGQTAKYYTRAGQFLLDTEG 122

Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172
            +V+  G             I        +      +     I      + + ++     
Sbjct: 123 YMVNPQGYRLQGYNVDANGDILAVPADLRITTVQTDAIATSAIDISMNLNSEDTKKLHPS 182

Query: 173 E 173
           +
Sbjct: 183 Q 183


>gi|294852968|ref|ZP_06793640.1| flagellar hook protein FlgE [Brucella sp. NVSL 07-0026]
 gi|294818623|gb|EFG35623.1| flagellar hook protein FlgE [Brucella sp. NVSL 07-0026]
          Length = 396

 Score = 86.8 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 5/123 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M      G++   A   RLSTVADN++N  TVG++  + +FS +V           S V 
Sbjct: 6   MMR---TGVSGMNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAGQYNSGS-VL 61

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASG 119
           +   Y   + G   ST +  D A++G+ +F ++ P G    TR G F    +G LV+++G
Sbjct: 62  TDVRYGISDQGGIRSTSSTTDLAIDGNGYFVVQGPGGSTYLTRAGSFVPDKNGDLVNSAG 121

Query: 120 KYP 122
            Y 
Sbjct: 122 YYL 124



 Score = 68.7 bits (166), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 23/54 (42%)

Query: 186 LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +      +  G LE+SNA+   E+  MI   + + + + +   + + M   + 
Sbjct: 340 PQGDGMGKIMSGTLEESNADIAQELTDMIEAQRSYTANSKVFQTDSELMDVLVN 393


>gi|256059804|ref|ZP_05449999.1| flagellar hook protein FlgE [Brucella neotomae 5K33]
 gi|261323784|ref|ZP_05962981.1| flagellar hook protein flgE [Brucella neotomae 5K33]
 gi|261299764|gb|EEY03261.1| flagellar hook protein flgE [Brucella neotomae 5K33]
          Length = 396

 Score = 86.8 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 5/123 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M      G++   A   RLSTVADN++N  TVG++  + +FS +V           S V 
Sbjct: 6   MMR---TGVSGMNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAGQYNSGS-VL 61

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASG 119
           +   Y   + G   ST +  D A++G+ +F ++ P G    TR G F    +G LV+++G
Sbjct: 62  TDVRYGISDQGGIRSTSSTTDLAIDGNGYFVVQGPGGSTYLTRAGSFVPDKNGDLVNSAG 121

Query: 120 KYP 122
            Y 
Sbjct: 122 YYL 124



 Score = 69.1 bits (167), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 22/54 (40%)

Query: 186 LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +      +  G LE+SNA+   E+  MI   + + + + +     + M   + 
Sbjct: 340 PQGDGMGKIMSGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGSELMDVLVN 393


>gi|319781665|ref|YP_004141141.1| flagellar hook-basal body protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317167553|gb|ADV11091.1| flagellar hook-basal body protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 419

 Score = 86.8 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/124 (29%), Positives = 56/124 (45%), Gaps = 5/124 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M      G++   A   RLSTVADN++N+DT G++    +FS +V             V 
Sbjct: 6   MMR---TGVSGMNAQANRLSTVADNIANSDTTGYKRSSAEFSTLVMPSTGGAYNSG-GVT 61

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASG 119
           +       + G    T +  D A+ GD +F ++ P G    TR G F     G LV+++G
Sbjct: 62  TTIRQAVSDPGVLQYTTSVSDLAVSGDGFFVVQDPSGTPYLTRAGAFVPDGQGRLVNSAG 121

Query: 120 KYPV 123
              +
Sbjct: 122 FQLM 125



 Score = 73.4 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/244 (12%), Positives = 66/244 (27%), Gaps = 27/244 (11%)

Query: 6   NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65
               ++ +A         DN+ N      + +                Q   F  S    
Sbjct: 190 YTSKSSMVAY--------DNLGN------KKLLDV---YFTNTGAGTWQVAVFDQSKATA 232

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125
            +    +        +   +        +P  +  T      +  D S ++  G    + 
Sbjct: 233 GTSFPYTAGGLLGSANLTFDTTTGKLTGTPTNVSFTVPNGATLNLDLSALTQLGTGFTVS 292

Query: 126 MASVPIQIPQKDEIFNVGEKGEISQK-----GKVIATMGLYSVDMSQGFVRRENSGISPN 180
            A V    P   +   + + G I  +      K +  + L  V           +  S  
Sbjct: 293 DAQVNGNAPSTIDKVQISKDGTIYAQYKDGSTKPLYKIPLADVQSPDQLKALPGNVYSQG 352

Query: 181 IPPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
                +      +    ++  G LE+SN +   E+  MI   + + + + +       M 
Sbjct: 353 TESGAVRVGFANEGKLGSIISGALENSNVDIAEELTNMIAAQRSYTANSKVFQTGSDLMD 412

Query: 236 EAIR 239
             + 
Sbjct: 413 VLVN 416


>gi|32477561|ref|NP_870555.1| flagellar hook protein FlgE [Rhodopirellula baltica SH 1]
 gi|32448115|emb|CAD77632.1| flagellar hook protein FlgE [Rhodopirellula baltica SH 1]
 gi|327543123|gb|EGF29559.1| flagellar hook protein FlgE [Rhodopirellula baltica WH47]
          Length = 811

 Score = 86.8 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 65/161 (40%), Gaps = 13/161 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------K 49
           Q++    L    A E ++  + +N++N  TVGF++    F+                   
Sbjct: 4   QSALTTALTGLSAAETQIDVIGNNLANAQTVGFKSSDAVFATQFLQTLSLGAGPSANNGG 63

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKV 108
            +  Q    V   +   +   G+   + +  D A++GD +F +++  G  + TR+G FK+
Sbjct: 64  TNPRQIGLGVQVAEIAANHNQGTIEISSSSSDLAIQGDGFFQVQAADGEKLYTRNGIFKL 123

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEIS 149
             D  LV+A+G+  +        ++     +      G  +
Sbjct: 124 NSDAELVNATGQRLLGYGIDEQFRLQTDSLVPLSVPLGTKT 164



 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 35/91 (38%), Gaps = 7/91 (7%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMY 208
           +  + L       G   R  +  +        +   P E+    TV  G LE SN +   
Sbjct: 719 LGQLQLARFANPAGLEARGLNLYAEGVNTGLPVTGQPGENG-IGTVIGGALELSNTDIGK 777

Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           ++ +++  + ++   + +I   ++ + E + 
Sbjct: 778 DLVELVLASTQYRGNSRVITTTQQLIDELLN 808


>gi|217959237|ref|YP_002337785.1| flagellar hook protein FlgE [Bacillus cereus AH187]
 gi|229138454|ref|ZP_04267043.1| Flagellar hook protein flgE [Bacillus cereus BDRD-ST26]
 gi|217065278|gb|ACJ79528.1| flagellar hook protein [Bacillus cereus AH187]
 gi|228644991|gb|EEL01234.1| Flagellar hook protein flgE [Bacillus cereus BDRD-ST26]
          Length = 407

 Score = 86.8 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 64/197 (32%), Gaps = 13/197 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49
           M  +    +    A +  LS  ++N++N  TVG++  K  F +++               
Sbjct: 1   MIKALYTSITGMNATQNALSVTSNNIANAQTVGYKKQKAMFDDLLYNNSIGAKGDDRYAG 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107
            +     + V           G+   TG +   A+EG+ +F         +  TR G F 
Sbjct: 61  TNPKSIGNGVKMSGTVTDYTDGTITLTGGKTQAAMEGNGFFVVGDSKAGNMEFTRKGTFT 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           ++ D  + +  G+Y     A           I    +    S  G +  + G+   ++  
Sbjct: 121 ISSDYYITNTEGQYVFAYPADSSTGNVDLSGIPGPLQVPMGSAIGGIRTSKGVVGGNIPA 180

Query: 168 GFVRRENSGISPNIPPT 184
              +        +    
Sbjct: 181 DAKQITQELPVYDNAGN 197



 Score = 63.0 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 11/93 (11%), Positives = 28/93 (30%), Gaps = 5/93 (5%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYE 209
              + +       G ++  N   +       L            V+    E +N +   E
Sbjct: 315 AGQLAVAMFPNEGGLMKTGNGNYTATNTTGILAMGVSGQNGAGKVRGSAQEGANVDLSVE 374

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
              ++   + F     +I  +++ + E +  I 
Sbjct: 375 FVDLMLYQRGFQGNAKVIKISDEVLNEVVNLIR 407


>gi|17988503|ref|NP_541136.1| flagellar hook protein FlgE [Brucella melitensis bv. 1 str. 16M]
 gi|256042866|ref|ZP_05445812.1| flagellar hook protein FlgE [Brucella melitensis bv. 1 str. Rev.1]
 gi|260564103|ref|ZP_05834588.1| flagellar hook protein flgE [Brucella melitensis bv. 1 str. 16M]
 gi|265989301|ref|ZP_06101858.1| flagellar hook protein flgE [Brucella melitensis bv. 1 str. Rev.1]
 gi|38257707|sp|Q8YDL6|FLGE_BRUME RecName: Full=Flagellar hook protein flgE
 gi|17984295|gb|AAL53400.1| flagellar hook protein flge [Brucella melitensis bv. 1 str. 16M]
 gi|260151746|gb|EEW86839.1| flagellar hook protein flgE [Brucella melitensis bv. 1 str. 16M]
 gi|262999970|gb|EEZ12660.1| flagellar hook protein flgE [Brucella melitensis bv. 1 str. Rev.1]
          Length = 396

 Score = 86.8 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 5/123 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M      G++   A   RLSTVADN++N  TVG++  + +FS +V           S V 
Sbjct: 6   MMR---TGVSGMNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAGQYNSGS-VL 61

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASG 119
           +   Y   + G   ST +  D A++G+ +F ++ P G    TR G F    +G LV+++G
Sbjct: 62  TDVRYGISDQGGIRSTSSTTDLAIDGNGYFVVQGPGGSTYLTRAGSFVPDKNGDLVNSAG 121

Query: 120 KYP 122
            Y 
Sbjct: 122 YYL 124



 Score = 67.2 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 22/54 (40%)

Query: 186 LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +      +  G LE+SNA+   E+  MI   + + + + +     + M   + 
Sbjct: 340 PQGDGMGKIMSGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGFELMDVLVN 393


>gi|62317957|ref|YP_223810.1| flagellar hook protein FlgE [Brucella abortus bv. 1 str. 9-941]
 gi|83269934|ref|YP_419225.1| flagellar hook protein FlgE [Brucella melitensis biovar Abortus
           2308]
 gi|189023208|ref|YP_001932949.1| flagellar hook protein FlgE [Brucella abortus S19]
 gi|225686885|ref|YP_002734857.1| flagellar hook protein FlgE [Brucella melitensis ATCC 23457]
 gi|254691611|ref|ZP_05154865.1| flagellar hook protein FlgE [Brucella abortus bv. 6 str. 870]
 gi|254731634|ref|ZP_05190212.1| flagellar hook protein FlgE [Brucella abortus bv. 4 str. 292]
 gi|256112177|ref|ZP_05453098.1| flagellar hook protein FlgE [Brucella melitensis bv. 3 str. Ether]
 gi|256256798|ref|ZP_05462334.1| flagellar hook protein FlgE [Brucella abortus bv. 9 str. C68]
 gi|256261978|ref|ZP_05464510.1| trypsin inhibitor Kunitz [Brucella melitensis bv. 2 str. 63/9]
 gi|260544142|ref|ZP_05819963.1| trypsin inhibitor Kunitz [Brucella abortus NCTC 8038]
 gi|260757242|ref|ZP_05869590.1| flagellar hook protein flgE [Brucella abortus bv. 6 str. 870]
 gi|260759393|ref|ZP_05871741.1| flagellar hook protein flgE [Brucella abortus bv. 4 str. 292]
 gi|260883046|ref|ZP_05894660.1| flagellar hook protein flgE [Brucella abortus bv. 9 str. C68]
 gi|265993603|ref|ZP_06106160.1| flagellar hook protein flgE [Brucella melitensis bv. 3 str. Ether]
 gi|297250151|ref|ZP_06933852.1| flagellar hook protein flgE [Brucella abortus bv. 5 str. B3196]
 gi|68845076|sp|O52070|FLGE_BRUAB RecName: Full=Flagellar hook protein flgE
 gi|12330680|gb|AAG52877.1| FlgE [Brucella abortus]
 gi|62198150|gb|AAX76449.1| FlgE, flagellar hook protein [Brucella abortus bv. 1 str. 9-941]
 gi|82940208|emb|CAJ13264.1| Flagellar basal body rod protein:Trypsin inhibitor Kunitz [Brucella
           melitensis biovar Abortus 2308]
 gi|189021782|gb|ACD74503.1| Trypsin inhibitor Kunitz [Brucella abortus S19]
 gi|225642990|gb|ACO02903.1| flagellar basal body FlaE domain protein [Brucella melitensis ATCC
           23457]
 gi|260097413|gb|EEW81287.1| trypsin inhibitor Kunitz [Brucella abortus NCTC 8038]
 gi|260669711|gb|EEX56651.1| flagellar hook protein flgE [Brucella abortus bv. 4 str. 292]
 gi|260677350|gb|EEX64171.1| flagellar hook protein flgE [Brucella abortus bv. 6 str. 870]
 gi|260872574|gb|EEX79643.1| flagellar hook protein flgE [Brucella abortus bv. 9 str. C68]
 gi|262764473|gb|EEZ10505.1| flagellar hook protein flgE [Brucella melitensis bv. 3 str. Ether]
 gi|263091462|gb|EEZ15998.1| trypsin inhibitor Kunitz [Brucella melitensis bv. 2 str. 63/9]
 gi|297174020|gb|EFH33384.1| flagellar hook protein flgE [Brucella abortus bv. 5 str. B3196]
 gi|326411303|gb|ADZ68367.1| flagellar hook protein FlgE [Brucella melitensis M28]
 gi|326554592|gb|ADZ89231.1| flagellar hook protein FlgE [Brucella melitensis M5-90]
          Length = 396

 Score = 86.8 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 5/123 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M      G++   A   RLSTVADN++N  TVG++  + +FS +V           S V 
Sbjct: 6   MMR---TGVSGMNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAGQYNSGS-VL 61

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASG 119
           +   Y   + G   ST +  D A++G+ +F ++ P G    TR G F    +G LV+++G
Sbjct: 62  TDVRYGISDQGGIRSTSSTTDLAIDGNGYFVVQGPGGSTYLTRAGSFVPDKNGDLVNSAG 121

Query: 120 KYP 122
            Y 
Sbjct: 122 YYL 124



 Score = 67.2 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 22/54 (40%)

Query: 186 LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +      +  G LE+SNA+   E+  MI   + + + + +     + M   + 
Sbjct: 340 PQGDGMGKIMSGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGFELMDVLVN 393


>gi|221215571|ref|ZP_03588534.1| flagellar hook protein FlgE [Burkholderia multivorans CGD1]
 gi|221164559|gb|EED97042.1| flagellar hook protein FlgE [Burkholderia multivorans CGD1]
          Length = 413

 Score = 86.8 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 63/189 (33%), Gaps = 2/189 (1%)

Query: 8   GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVASGKEY 65
           GL+        L  + +N++N +TVGF++   +FS++           Q     A     
Sbjct: 6   GLSGLAGASNALDVIGNNIANANTVGFKSSTAQFSDMYANSIATSVNTQIGIGTALASVQ 65

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125
                G+  +T + LD A+ G+ +F + +   I  TRDG F+   +G +V++ G   +  
Sbjct: 66  QQFGQGTINTTNSSLDVAINGNGFFQMSNNGTITYTRDGTFQRDKNGYIVNSQGLNLMGY 125

Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185
            A     I     +        I+       T             +              
Sbjct: 126 AADKNGVINTAQTVPLQAPTTNIAPTATTKITGQFNLNSQDTVPTKTPFDATDTTTYNYS 185

Query: 186 LEDLSGVTV 194
                  ++
Sbjct: 186 TSIQVYDSL 194



 Score = 66.8 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 20/166 (12%), Positives = 47/166 (28%), Gaps = 6/166 (3%)

Query: 80  LDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEI 139
              A  G   F + +  G    +     +T         G   +         +      
Sbjct: 247 TPTAALGQFQFTVPNTDGSATPQTLTLDLTGTTQYGGKDGVNNLAQDGYASGTLTTFTIG 306

Query: 140 FNVGEKGEISQ-KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVT 193
            +    G  S  +  V+  + L + +   G V    +  +        +       +  T
Sbjct: 307 TDGKLTGNYSNGQTAVLGQIALANFNNPNGLVNIGGNQYAETPASGVPQISVPGSTNHGT 366

Query: 194 VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           ++   LE+SN +   ++  +I   + + +    I   +      I 
Sbjct: 367 LQGSALENSNVDLTSQLVNLITAQRNYQANAQTIKTQQTVDQTLIN 412


>gi|308273521|emb|CBX30123.1| hypothetical protein N47_D29320 [uncultured Desulfobacterium sp.]
          Length = 469

 Score = 86.8 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 32/123 (26%), Positives = 52/123 (42%), Gaps = 6/123 (4%)

Query: 9   LAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA---IKNDIDQKISFVASGKEY 65
           ++   AL   ++ + DN++N +TVGF+  +V F +V+           Q     +     
Sbjct: 1   MSGLNALGNAMTVIGDNIANVNTVGFKESRVTFQDVLSQTVATTAGSAQVGRGTSLADIS 60

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALESP---RGIILTRDGRFKVTDDGSLVSASGKYP 122
            S   GSF ST +  D A+ G  +F +  P        TR G F+   DG+ V+ S    
Sbjct: 61  SSFSQGSFESTDSSTDLAIGGAGFFMVRDPGTSNNDYYTRAGEFRFDKDGNFVNPSDYIV 120

Query: 123 VLD 125
              
Sbjct: 121 QGW 123



 Score = 79.1 bits (193), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 23/214 (10%), Positives = 58/214 (27%), Gaps = 10/214 (4%)

Query: 36  TIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP 95
              ++F+   G I   ++     ++ G    +    +  +               +  + 
Sbjct: 253 RGTIEFNGTSGDISGGVNSITCSLSDGAGGWTALANTDATANGGYFTFAPEFIAGSPMNV 312

Query: 96  RGIILTRDGRFKVTDDGSLVSASGK-----YPVLDMASVPIQIPQKDEIFNVGEKGEISQ 150
           +    TR    +  +D    +         +   D                V      + 
Sbjct: 313 KLDFGTRFNGSEWANDALSTTQYASASTTVFQSADGYGAGDLQAISVATDGVITGQYSNG 372

Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNAN 205
           +   +  + L      QG  +   +  S                   ++    LE SN +
Sbjct: 373 QVLPLYRVALAKFQNEQGLYKVGGNLFSQTRLSGEPITGKPGGNGLGSLSPNSLEQSNVD 432

Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              E  +MI   + + + + +I   ++ + E I 
Sbjct: 433 LATEFVRMITTQRGYQANSKIITTIDQMLSELIN 466


>gi|254699262|ref|ZP_05161090.1| flagellar hook protein FlgE [Brucella suis bv. 5 str. 513]
 gi|254706497|ref|ZP_05168325.1| flagellar hook protein FlgE [Brucella pinnipedialis M163/99/10]
 gi|254711218|ref|ZP_05173029.1| flagellar hook protein FlgE [Brucella pinnipedialis B2/94]
 gi|254711818|ref|ZP_05173629.1| flagellar hook protein FlgE [Brucella ceti M644/93/1]
 gi|254714887|ref|ZP_05176698.1| flagellar hook protein FlgE [Brucella ceti M13/05/1]
 gi|256015898|ref|YP_003105907.1| flagellar hook protein [Brucella microti CCM 4915]
 gi|256030153|ref|ZP_05443767.1| flagellar hook protein FlgE [Brucella pinnipedialis M292/94/1]
 gi|256158332|ref|ZP_05456236.1| flagellar hook protein FlgE [Brucella ceti M490/95/1]
 gi|256252734|ref|ZP_05458270.1| flagellar hook protein FlgE [Brucella ceti B1/94]
 gi|260166795|ref|ZP_05753606.1| flagellar hook protein FlgE [Brucella sp. F5/99]
 gi|261216577|ref|ZP_05930858.1| flagellar hook protein flgE [Brucella ceti M13/05/1]
 gi|261219813|ref|ZP_05934094.1| flagellar hook protein flgE [Brucella ceti B1/94]
 gi|261313950|ref|ZP_05953147.1| flagellar hook protein flgE [Brucella pinnipedialis M163/99/10]
 gi|261318810|ref|ZP_05958007.1| flagellar hook protein flgE [Brucella pinnipedialis B2/94]
 gi|261319447|ref|ZP_05958644.1| flagellar hook protein flgE [Brucella ceti M644/93/1]
 gi|261749702|ref|ZP_05993411.1| flagellar hook protein flgE [Brucella suis bv. 5 str. 513]
 gi|261756173|ref|ZP_05999882.1| trypsin inhibitor Kunitz [Brucella sp. F5/99]
 gi|265987183|ref|ZP_06099740.1| flagellar hook protein flgE [Brucella pinnipedialis M292/94/1]
 gi|265996846|ref|ZP_06109403.1| flagellar hook protein flgE [Brucella ceti M490/95/1]
 gi|255998558|gb|ACU50245.1| flagellar hook protein [Brucella microti CCM 4915]
 gi|260918397|gb|EEX85050.1| flagellar hook protein flgE [Brucella ceti B1/94]
 gi|260921666|gb|EEX88234.1| flagellar hook protein flgE [Brucella ceti M13/05/1]
 gi|261292137|gb|EEX95633.1| flagellar hook protein flgE [Brucella ceti M644/93/1]
 gi|261298033|gb|EEY01530.1| flagellar hook protein flgE [Brucella pinnipedialis B2/94]
 gi|261302976|gb|EEY06473.1| flagellar hook protein flgE [Brucella pinnipedialis M163/99/10]
 gi|261736157|gb|EEY24153.1| trypsin inhibitor Kunitz [Brucella sp. F5/99]
 gi|261739455|gb|EEY27381.1| flagellar hook protein flgE [Brucella suis bv. 5 str. 513]
 gi|262551143|gb|EEZ07304.1| flagellar hook protein flgE [Brucella ceti M490/95/1]
 gi|264659380|gb|EEZ29641.1| flagellar hook protein flgE [Brucella pinnipedialis M292/94/1]
          Length = 396

 Score = 86.8 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 5/123 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M      G++   A   RLSTVADN++N  TVG++  + +FS +V           S V 
Sbjct: 6   MMR---TGVSGMNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAGQYNSGS-VL 61

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASG 119
           +   Y   + G   ST +  D A++G+ +F ++ P G    TR G F    +G LV+++G
Sbjct: 62  TDVRYGISDQGGIRSTSSTTDLAIDGNGYFVVQGPGGSTYLTRAGSFVPDKNGDLVNSAG 121

Query: 120 KYP 122
            Y 
Sbjct: 122 YYL 124



 Score = 69.1 bits (167), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 22/54 (40%)

Query: 186 LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +      +  G LE+SNA+   E+  MI   + + + + +     + M   + 
Sbjct: 340 PQGDGMGKIMSGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGSELMDVLVN 393


>gi|260466603|ref|ZP_05812791.1| flagellar basal body FlaE domain protein [Mesorhizobium
           opportunistum WSM2075]
 gi|259029609|gb|EEW30897.1| flagellar basal body FlaE domain protein [Mesorhizobium
           opportunistum WSM2075]
          Length = 418

 Score = 86.8 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 5/124 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M      G++   A   RLST ADN++N+DT G++    +FS ++             V 
Sbjct: 6   MMR---TGVSGMNAQANRLSTTADNIANSDTTGYKRSSAEFSTLIMPSTGGAYNSG-GVT 61

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASG 119
           +       + G    T +  D A+ GD +F ++ P G    TR G F     G LV+A+G
Sbjct: 62  TTIRQAVSDPGVLQYTTSVSDLAVSGDGFFVVQDPSGTPYLTRAGAFVPDAQGRLVNAAG 121

Query: 120 KYPV 123
              +
Sbjct: 122 FQLM 125



 Score = 77.6 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/242 (11%), Positives = 69/242 (28%), Gaps = 22/242 (9%)

Query: 20  STVADNM--SNTDTVGF--RTIKVKFS--------EVVGAIKNDIDQKISFVASGKEYLS 67
           +    N+  +N  T  +  ++  V +         +V          +++     K    
Sbjct: 174 AVATANLPGANAATAQYTSKSSMVAYDNLGNKKLLDVYFTNTGTGTWQVAVFDQSKATAG 233

Query: 68  KEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMA 127
                        +   +        +P  +  T  G   +  D S ++  G    +  A
Sbjct: 234 TSFPYTGGALGTANLTFDTTTGKLTGTPTSVSFTVPGGASLNLDLSTLTQLGTGFTVSDA 293

Query: 128 SVPIQIPQKDEIFNVGEKGEISQK-----GKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
            V    P   +   + + G I  +      K +  + L  V           +  +    
Sbjct: 294 QVNGNAPSAIDKVQISKDGTIYAQYKDGTSKPLYKIPLADVQSPDQLKALPGNVYAQGTD 353

Query: 183 PTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
              +      +    ++  G LE+SN +   E+  MI   + + + + +       M   
Sbjct: 354 SGAVRVGFANEGKAGSIISGALENSNVDIAEELTDMIAAQRSYTANSKVFQTGSDLMDVL 413

Query: 238 IR 239
           + 
Sbjct: 414 VN 415


>gi|149202208|ref|ZP_01879181.1| flagellar hook protein FlgE [Roseovarius sp. TM1035]
 gi|149144306|gb|EDM32337.1| flagellar hook protein FlgE [Roseovarius sp. TM1035]
          Length = 419

 Score = 86.8 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 76/199 (38%), Gaps = 8/199 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV--GAIKNDIDQKISFVAS 61
           SF+  L+   A +  +S  ++N++N  T+GF   + +F+++           Q  S    
Sbjct: 2   SFHTALSGLNAAQTDISVTSNNIANVGTLGFHGSRAEFADIYTTSPYSRPASQIGSGTEV 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPR----GIILTRDGRFKVTDDGSLVSA 117
            +  +  + GS  +TG  LD +L+G  +F + +          TR G F +  +G + +A
Sbjct: 62  SRIGVDFKQGSLTATGNVLDLSLQGPGFFQVRTGPDAGADAGYTRAGAFGMNREGFVTNA 121

Query: 118 SGKY--PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
           +G +        +       + +   + ++    Q    +      S+  + G   +   
Sbjct: 122 AGHFLTVFPTSENGDTLSTTQTQRLQIPQQFGTPQATTAVDLSFNLSLSNNGGLGAQAAI 181

Query: 176 GISPNIPPTPLEDLSGVTV 194
             +   P  P    +   +
Sbjct: 182 PAAAFDPADPTTYAATTQI 200



 Score = 63.7 bits (153), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 9/98 (9%), Positives = 32/98 (32%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLED 201
             ++    +  + + +    QG     ++    +     +      T     ++ G +E 
Sbjct: 319 YGAETSVAVGQVAVANFSDIQGLGSIGSATYRASRESGDVRLGVPGTSGFGAIRAGSVER 378

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   ++  +I   + + +    ++ N       + 
Sbjct: 379 SNVDLTEQLVNLIMAQRNYQASAKALETNGTLADTVLN 416


>gi|296531742|ref|ZP_06894567.1| flagellar hook protein FlgE [Roseomonas cervicalis ATCC 49957]
 gi|296267925|gb|EFH13727.1| flagellar hook protein FlgE [Roseomonas cervicalis ATCC 49957]
          Length = 506

 Score = 86.8 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 67/185 (36%), Gaps = 4/185 (2%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
             +     +   A   +LS +++N++N+ TVG++ +  +F  +V    +     ++ V  
Sbjct: 4   INALRTSTSGLNAQAVKLSGISNNIANSSTVGYKRVDTQFESLVLEGSSSGSYALAGVTP 63

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII----LTRDGRFKVTDDGSLVSA 117
                  +VG    TG + D A+ G+ +  +            TR G F+    G+LV++
Sbjct: 64  RNRVEISKVGQVQRTGVDTDIAVSGNGFLVVNENSDSTGKYLATRAGSFRPDAFGNLVNS 123

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177
           +G Y                   NV     ++     +A+     +       +      
Sbjct: 124 AGFYLQGVKLGADGLPVGNLGDNNVDSLSTVNVNNISVASAPTTEMRTWFNLPKNSTGYA 183

Query: 178 SPNIP 182
           SP  P
Sbjct: 184 SPPPP 188



 Score = 74.9 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 16/94 (17%), Positives = 33/94 (35%), Gaps = 5/94 (5%)

Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNAN 205
           K + I  + L     + G           ++             +  T   G LE SN +
Sbjct: 410 KSRPIYALKLAVFPNANGLNPVSGDAYEMSLAAGAVRLIDPGTGAAGTTNGGALESSNVD 469

Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              E+  +I   + ++S  T++   ++ + EA  
Sbjct: 470 IGTELTNLIETQRAYSSNATVVRTADQMLEEATN 503


>gi|306845419|ref|ZP_07477993.1| flagellar hook protein FlgE [Brucella sp. BO1]
 gi|306274162|gb|EFM55978.1| flagellar hook protein FlgE [Brucella sp. BO1]
          Length = 396

 Score = 86.8 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 5/123 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M      G++   A   RLSTVADN++N  TVG++  + +FS +V           S V 
Sbjct: 6   MMR---TGVSGMNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAGQYNSGS-VL 61

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASG 119
           +   Y   + G   ST +  D A++G+ +F ++ P G    TR G F    +G LV+++G
Sbjct: 62  TDVRYGISDQGGIRSTSSTTDLAIDGNGYFVVQGPGGSTYLTRAGSFVPDKNGDLVNSAG 121

Query: 120 KYP 122
            Y 
Sbjct: 122 YYL 124



 Score = 68.4 bits (165), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 10/51 (19%), Positives = 21/51 (41%)

Query: 189 LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
                +  G LE+SNA+   E+  MI   + + + + +     + M   + 
Sbjct: 343 DGMGKIMSGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGSELMDVLVN 393


>gi|262276417|ref|ZP_06054226.1| flagellar hook protein FlgE [Grimontia hollisae CIP 101886]
 gi|262220225|gb|EEY71541.1| flagellar hook protein FlgE [Grimontia hollisae CIP 101886]
          Length = 435

 Score = 86.8 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 65/129 (50%), Gaps = 6/129 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61
           + NI L+   A ++ ++T ++N++N +T GF+  + +F +V  A    N      S V +
Sbjct: 2   ALNIALSGLAAAQKDMNTTSNNIANANTFGFKESRAEFGDVYSASIFSNAKTTTGSGVQT 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESP----RGIILTRDGRFKVTDDGSLVSA 117
                    GS I T   LD  + G+ +F++ +     +  +LTR+G F +  D ++V++
Sbjct: 62  SIVAQQFHEGSSIYTNNPLDLRISGNGYFSVANDKLATQDNVLTRNGAFHLDKDNNIVNS 121

Query: 118 SGKYPVLDM 126
            G++ +   
Sbjct: 122 EGQFLLGYN 130



 Score = 66.0 bits (159), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 15/120 (12%), Positives = 37/120 (30%), Gaps = 5/120 (4%)

Query: 125 DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN---- 180
           D A+         +          + +   +  + +  V   QG  +  N+         
Sbjct: 314 DGATTGYLAKVDIDPKGTIMATYSNGENVALGRVAMVRVSNQQGLSQAGNTQWKVTQQSG 373

Query: 181 -IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
                     +   VK G +E SN +   E+  +I   + F + +  ++   +     ++
Sbjct: 374 EAIWGEAMQGAFGKVKSGTIEQSNIDMTQELVDLITAQRNFQANSRSLEVGNQMQQTILQ 433


>gi|254994099|ref|ZP_05276289.1| flagellar hook protein FlgE [Listeria monocytogenes FSL J2-064]
          Length = 208

 Score = 86.8 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 32/148 (21%), Positives = 59/148 (39%), Gaps = 13/148 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    ++   A +Q LS  ++N++N +T G++   V F++++            +  
Sbjct: 1   MNQTMYTAISGMNAFQQALSVTSNNIANANTTGYKKQSVVFNDLLYQNTMGSVAGGLYAG 60

Query: 61  SGKEYL-----------SKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107
           +                    GS  +TG   D AL+G  +F     +   I+ TRDG F 
Sbjct: 61  TNPMSFGSGSKIGAILTDYTAGSPTATGRNKDAALQGRGFFIAGDNAGGNIVYTRDGSFA 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQ 135
           V+D+  L +  GKY +         +  
Sbjct: 121 VSDNNYLTTQQGKYVMGYATDKNGNVLN 148


>gi|209963559|ref|YP_002296474.1| flagellar hook protein FlgE [Rhodospirillum centenum SW]
 gi|209957025|gb|ACI97661.1| flagellar hook protein FlgE [Rhodospirillum centenum SW]
          Length = 434

 Score = 86.5 bits (212), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 73/200 (36%), Gaps = 8/200 (4%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
           ++   G++   A   + + ++DN+SN+ TVG++   V+FS +V +  +        V + 
Sbjct: 5   SAMYSGVSGLAAQSAKFAAISDNISNSSTVGYKRSGVQFSTLVTSASSPGSYSAGGVQAD 64

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALES--------PRGIILTRDGRFKVTDDGSL 114
                   G   +T +  D A+ G  +F + +            +LTR G F+V ++G+L
Sbjct: 65  LHTEVSRGGIVQATNSATDMAISGRGFFVVSNRSAAVNGEAPSYMLTRSGAFRVDENGNL 124

Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174
            + +G +          ++   +         E      +       +       +    
Sbjct: 125 HNTAGYFLQGWKLGPDGKVVGGEPSRTSFTGLETVNLSSITGLAKATTQIDFAANLPASQ 184

Query: 175 SGISPNIPPTPLEDLSGVTV 194
           +G +P   P          +
Sbjct: 185 TGKTPPAQPFSTSVDYYTPL 204



 Score = 75.7 bits (184), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 19/142 (13%), Positives = 45/142 (31%), Gaps = 10/142 (7%)

Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG-----KVIATMG 159
                +    ++  G   V    +         E   +G+ G ++        + +  + 
Sbjct: 287 NLGRPNQTGGLTQWGDDYVPTKINKDGASYAPLERVEIGDDGVMTAIYKNGLRQAVYQIP 346

Query: 160 LYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGF-----LEDSNANSMYEMGQMI 214
           +  V    G  R + +    +            + K G      LE SN +   E+  +I
Sbjct: 347 VADVTNPDGLRRMDGNAFQVSRESGDYYLWDAGSGKAGAVDGAALEASNVDIAEELTSII 406

Query: 215 HLTQKFNSITTLIDENEKSMLE 236
              + ++S   +I   ++ + E
Sbjct: 407 ETQRAYSSNAKIIQTADEMLDE 428


>gi|312962588|ref|ZP_07777078.1| flagellar hook protein FlgE [Pseudomonas fluorescens WH6]
 gi|311283168|gb|EFQ61759.1| flagellar hook protein FlgE [Pseudomonas fluorescens WH6]
          Length = 437

 Score = 86.5 bits (212), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 33/125 (26%), Positives = 58/125 (46%), Gaps = 3/125 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--ISFVAS 61
           SFNIGL+   A  ++L    +N++N  T GF++ + +F+++  A K    Q    + V  
Sbjct: 2   SFNIGLSGLYAANKQLDVTGNNIANVATTGFKSSRAEFADIYAASKLGTGQNSIGNGVNL 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLVSASGK 120
                    G    +G  LD A++G  +F  +   G +  TR G F+   DG + + +G 
Sbjct: 62  AAVSQQFTQGDVNGSGGILDMAIQGGGFFVQKGSDGSLEYTRSGAFRADKDGFITNNTGT 121

Query: 121 YPVLD 125
             +  
Sbjct: 122 SRLQG 126



 Score = 70.7 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 40/128 (31%), Gaps = 5/128 (3%)

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
                P+ D  +       K +   V      +Q+ K I  + L S +  QG     ++ 
Sbjct: 308 TYRNPPITDGYATGQITGLKIDGNGVMFATFSNQQSKAIGQISLASFNNEQGLQPAGSTT 367

Query: 177 ISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
                          +  +  ++    LE+SN N   E+  +I     + +    I    
Sbjct: 368 WRETFASGQPGYDTPQSGTLGSIVANSLENSNVNLTNELVDLIKAQSNYQANAKTISTQS 427

Query: 232 KSMLEAIR 239
             M   I+
Sbjct: 428 TIMQTIIQ 435


>gi|288871078|ref|ZP_06116279.2| flagellar hook protein [Clostridium hathewayi DSM 13479]
 gi|288864882|gb|EFC97180.1| flagellar hook protein [Clostridium hathewayi DSM 13479]
          Length = 653

 Score = 86.5 bits (212), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 70/196 (35%), Gaps = 13/196 (6%)

Query: 12  QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------KNDIDQKISFV 59
             A + +L  + +N++N +T GF++ + +F +V                  +  Q     
Sbjct: 1   MKAHQTKLDVIGNNIANVNTYGFKSSRARFQDVFYQTLQSAAGGDNNKGGTNASQVGYGS 60

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSAS 118
             G   L     +  STG  LD A+ G+ +F  +++   I  TR G   +  +   +  S
Sbjct: 61  QLGGIDLDMSRSALQSTGRPLDVAIAGEGFFQVMDADGNIFYTRAGNLMLDSNSGNLVDS 120

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178
             Y VL ++  P+      +  ++    + S       T+      ++      + +   
Sbjct: 121 NGYTVLGVSGDPLGKAPSSDKIHLNIPTKSSGLASKTLTINGTQFTITSEKATTDANVSI 180

Query: 179 PNIPPTPLEDLSGVTV 194
                  L   S + V
Sbjct: 181 TFKAEDNLPSGSDIVV 196



 Score = 76.1 bits (185), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 32/98 (32%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLED 201
              +    I  + L + +   G     NS           +     +     +K   LE 
Sbjct: 553 HPDKGKIQIGRIDLVTFENPYGLEESGNSYFRATSNSGEAKACQAGEDGTGALKTSSLEM 612

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E   MI   + F + + +I  ++  + E + 
Sbjct: 613 SNVDISTEFSDMIVTQRGFQANSRIITVSDSILEELVN 650


>gi|68164546|gb|AAY87275.1| predicted flagellar hook protein [uncultured bacterium BAC17H8]
          Length = 1387

 Score = 86.5 bits (212), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 57/135 (42%), Gaps = 5/135 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG--AIKNDIDQKISFVAS 61
           SF   L         +S  ++N++N  T GF+  +V+F ++     ++N      S    
Sbjct: 2   SFYTALTGLNGSSADISATSNNIANVGTTGFKRSRVEFGDIFATSPLQNASSSIGSGTIL 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALES---PRGIILTRDGRFKVTDDGSLVSAS 118
                    G+  ++   LD A+ G  +FAL+        + TR+G   V +D  +V ++
Sbjct: 62  KGIKQQFTQGNIAASLNALDLAISGQGFFALKPSLTSAQTVYTRNGSLNVNNDRYVVDSA 121

Query: 119 GKYPVLDMASVPIQI 133
           G++ +    +    +
Sbjct: 122 GQFLLTYPVNTDGSV 136



 Score = 76.1 bits (185), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 13/123 (10%), Positives = 35/123 (28%), Gaps = 5/123 (4%)

Query: 122  PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
               D  +       + +          + +   +  + + + +   G  +  N+  +   
Sbjct: 1262 VEQDGFTSGRLDGIEIDSSGTIRANYTNGQNNPLGKIVVANFNNQNGLKQIGNATYTETA 1321

Query: 182  PPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                 +     +     +  G LE SN +   E+  +I   + F +    I+        
Sbjct: 1322 VSGTPQVGEAGSEGFGNILSGSLERSNVDITEELVNLITAQRNFQASAKAIETTTGLTQT 1381

Query: 237  AIR 239
             I 
Sbjct: 1382 IIN 1384


>gi|161511182|ref|NP_777929.2| flagellar basal body rod protein FlgF [Buchnera aphidicola str. Bp
           (Baizongia pistaciae)]
 gi|46395817|sp|Q89AH8|FLGF_BUCBP RecName: Full=Flagellar basal-body rod protein flgF
          Length = 248

 Score = 86.5 bits (212), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 47/245 (19%), Positives = 103/245 (42%), Gaps = 13/245 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M++  N  + +   + +  + +A+N++N  T GF+  +++   ++ + K+   Q+ +F+ 
Sbjct: 1   MESIVNAIITSTNKIFENQARIANNITNISTPGFK-SELELKILLPSQKDQNSQEDNFL- 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDA--WFALESPRGIILTRDGRFKVTDDGSLVSAS 118
             K+Y +K  G+   T   LD A+      +     P+ I  T++G FK+  +  L    
Sbjct: 59  -YKQYKNKNQGTLRRTNQPLDCAIIDKNDWFVIKIDPKTIAYTKNGHFKINSNRQL--TV 115

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM--SQGFVRRENSG 176
             +PVL           ++ + +      I +   +   +  + +          + N  
Sbjct: 116 QNHPVLGEDGEIFIPKNENIVISSDGYINIIKNNVLQHKVAQFKLKNFDINDLTYKTNGL 175

Query: 177 ISPN----IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
              N    +  T  +++S + +  G LEDSN N    M +MI   +KF+    ++    +
Sbjct: 176 YLLNKNNKLNHTNHKNVSNIKLVSGILEDSNVNLEENMVEMISNARKFDMQIKILSMYNE 235

Query: 233 SMLEA 237
           +   A
Sbjct: 236 NTQAA 240


>gi|296274022|ref|YP_003656653.1| fagellar hook-basal body protein [Arcobacter nitrofigilis DSM 7299]
 gi|296098196|gb|ADG94146.1| fagellar hook-basal body protein [Arcobacter nitrofigilis DSM 7299]
          Length = 487

 Score = 86.5 bits (212), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 54/126 (42%), Gaps = 7/126 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  S    L+   A    +   ++N++N +T+  +  ++ F++ +             V 
Sbjct: 1   MNGSLYNSLSGIYAASNYVDVASNNIANINTIAHKEDRISFADQMYQNG-----IGKGVG 55

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG--IILTRDGRFKVTDDGSLVSAS 118
           +G    S   G    T  + DFA++G  +F L  P       TR G F  ++DG+LV+A 
Sbjct: 56  AGTVNKSFRQGDVKDTNNQYDFAIQGKGFFILTDPETNLTYYTRAGNFTKSNDGTLVNAQ 115

Query: 119 GKYPVL 124
           G   + 
Sbjct: 116 GLDVMG 121



 Score = 65.7 bits (158), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 12/89 (13%), Positives = 28/89 (31%), Gaps = 1/89 (1%)

Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPN-IPPTPLEDLSGVTVKRGFLEDSNANSMYE 209
              +   +        Q      ++  +            +  TV    +E SN N    
Sbjct: 394 NTYIAGRISTAYFPDEQSLNPEGDNLYTQTKESGEAKNADTLNTVVSHSVEASNINVATA 453

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           + ++I   + F + +  I  ++  +  AI
Sbjct: 454 LTKLIIAQRAFEASSKAITTSDSFLDTAI 482


>gi|23500854|ref|NP_700294.1| flagellar hook protein FlgE [Brucella suis 1330]
 gi|38257619|sp|Q8FUS9|FLGE_BRUSU RecName: Full=Flagellar hook protein FlgE
 gi|23464518|gb|AAN34299.1| flagellar hook protein FlgE [Brucella suis 1330]
          Length = 396

 Score = 86.5 bits (212), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 5/123 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M      G++   A   RLSTVADN++N  TVG++  + +FS +V           S V 
Sbjct: 6   MMR---TGVSGMNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAGQYNSGS-VL 61

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASG 119
           +   Y   + G   ST +  D A++G+ +F ++ P G    TR G F    +G LV+++G
Sbjct: 62  TDVRYGISDQGGIRSTSSTTDLAIDGNGYFVVQGPGGSTYLTRAGSFVPDKNGDLVNSAG 121

Query: 120 KYP 122
            Y 
Sbjct: 122 YYL 124



 Score = 68.7 bits (166), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 22/54 (40%)

Query: 186 LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +      +  G LE+SNA+   E+  MI   + + + + +     + M   + 
Sbjct: 340 PQGDGMGKIMSGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGSELMDVLVN 393


>gi|289607949|emb|CBI60684.1| unnamed protein product [Sordaria macrospora]
          Length = 240

 Score = 86.5 bits (212), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 52/124 (41%), Gaps = 7/124 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG-------AIKNDID 53
           M  +  IGL+   A  + L  V++N+SN +T GF+   V F  +         ++     
Sbjct: 1   MFGAIYIGLSGLNAYSKGLQQVSNNVSNLNTTGFKGSTVSFHNLYATPDRGGMSLTGQGG 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113
                V      L+ + G   ST  +LD +++G  +  L      +  R G F+V   G 
Sbjct: 61  SAGYGVEVDDGTLNFKQGELRSTDRDLDLSVDGSGFLVLLDGDRTLYARTGSFEVDPAGF 120

Query: 114 LVSA 117
           +V +
Sbjct: 121 IVMS 124


>gi|269866427|ref|XP_002652270.1| flagellar hook protein flgE [Enterocytozoon bieneusi H348]
 gi|220062840|gb|EED41785.1| flagellar hook protein flgE [Enterocytozoon bieneusi H348]
          Length = 140

 Score = 86.5 bits (212), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 33/125 (26%), Positives = 59/125 (47%), Gaps = 3/125 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--ISFVAS 61
           SFNIGL+   A  ++L    +N++N  T GF++ + +F+++  A K    Q    + V  
Sbjct: 2   SFNIGLSGLYAANKQLDVTGNNIANVATTGFKSSRAEFADIYAASKLGTGQNSIGNGVNL 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLVSASGK 120
                    G   ++G  LD A++G  +F  +   G +  TR G F+   DG + + +G 
Sbjct: 62  AAVSQQFTQGDVNNSGGVLDMAIQGGGFFVQKGSDGSLEYTRSGAFRADKDGYITNNTGT 121

Query: 121 YPVLD 125
             +  
Sbjct: 122 SRLQG 126


>gi|153001472|ref|YP_001367153.1| flagellar hook protein FlgE [Shewanella baltica OS185]
 gi|160876203|ref|YP_001555519.1| flagellar hook protein FlgE [Shewanella baltica OS195]
 gi|217972598|ref|YP_002357349.1| flagellar hook protein FlgE [Shewanella baltica OS223]
 gi|151366090|gb|ABS09090.1| flagellar basal body FlaE domain protein [Shewanella baltica OS185]
 gi|160861725|gb|ABX50259.1| flagellar basal body FlaE domain protein [Shewanella baltica OS195]
 gi|217497733|gb|ACK45926.1| flagellar basal body FlaE domain protein [Shewanella baltica OS223]
 gi|315268393|gb|ADT95246.1| fagellar hook-basal body protein [Shewanella baltica OS678]
          Length = 453

 Score = 86.5 bits (212), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 37/125 (29%), Positives = 62/125 (49%), Gaps = 5/125 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61
           SFNI L+   A ++ L+T A+N++N +T+GF+  + +F++V       N        VA+
Sbjct: 2   SFNIALSGISAAQKDLNTTANNIANANTIGFKESRAEFADVYANSIFSNSKTAVGGGVAT 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII---LTRDGRFKVTDDGSLVSAS 118
            +       GS   T   LD A++G  +F   S  G +    TR G FKV  +  +V ++
Sbjct: 62  SQVAQQFHQGSLQLTSNSLDMAIKGGGFFVTASEIGSLDHSFTRAGAFKVDSNNYMVDSA 121

Query: 119 GKYPV 123
           G +  
Sbjct: 122 GNFLQ 126



 Score = 64.9 bits (156), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 16/123 (13%), Positives = 39/123 (31%), Gaps = 5/123 (4%)

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
              D  +V      +     +      +     +A + L      QG  +  N+    ++
Sbjct: 329 LTQDGTTVGRLTNVEIGADGLITASYSNGSSVPLARVALVRFANEQGLTQVGNTSWKASL 388

Query: 182 PPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
              P         +  ++    LE SN +   E+  +I   + F + +  ++ N      
Sbjct: 389 NSGPALAGEANSGTFGSISSSALEQSNIDLTTELVDLISAQRNFQANSRTLEVNNTLQQT 448

Query: 237 AIR 239
            ++
Sbjct: 449 VLQ 451


>gi|71906391|ref|YP_283978.1| flagellar hook protein FlgE [Dechloromonas aromatica RCB]
 gi|71846012|gb|AAZ45508.1| Flagellar basal body rod protein:Protein of unknown function
           DUF1078:Flagellar basal body FlaE [Dechloromonas
           aromatica RCB]
          Length = 442

 Score = 86.5 bits (212), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 70/190 (36%), Gaps = 2/190 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61
           +F  GL+      + L   ++N++N  TVGF++    F++V  A        Q    V++
Sbjct: 2   AFQQGLSGLNTSSKALDVTSNNIANASTVGFKSASTHFADVYAASLAGGGASQVGIGVSA 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
                    G+  +T   LD AL G+ +F +     +  TR+G+F +   G +V+ + + 
Sbjct: 62  SAIAQQFTQGNITTTSNSLDIALNGNGFFRMTQDGAVRYTRNGQFHLDSTGYIVNDNKEN 121

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
                A    +I          +   IS +     + G+          +   +  +   
Sbjct: 122 LTGYAADAQGKIVASTPSGIKVDTAPISPQATGATSDGVRFSLNLNSTDKVPGTAWTSPT 181

Query: 182 PPTPLEDLSG 191
                +  + 
Sbjct: 182 GTNVPDTSTY 191



 Score = 77.2 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/224 (12%), Positives = 65/224 (29%), Gaps = 17/224 (7%)

Query: 26  MSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALE 85
           ++N  T G         +V   +    +  +        + S       +T   L   L 
Sbjct: 224 LANPTTTG-------AWDVHYQVDGTSEANVGGSPLRMTFDSTGAYLAPTTPATLAVNLN 276

Query: 86  GDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEK 145
           G A         +  +         + +  +  G    +   +       +     +G+ 
Sbjct: 277 GVATNLSTPANVVTNSATSPLSFAMNFAGSTQYGSDFAIASKTQDGYASGQLSSLTIGDN 336

Query: 146 GEISQ-----KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP-----LEDLSGVTVK 195
           G I       + + +A + L +     G +   N+                   +   ++
Sbjct: 337 GVIQGVYSNGQTRNMAQIVLANFQNPNGLMSIGNNDYIETADSGQSMIGTPNTGTFGVLQ 396

Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            G +EDSN +   E+  MI   + + +    I   ++ M   + 
Sbjct: 397 SGAVEDSNVDLTAELVNMIVQQRNYQANAQSIKTQDQIMQTLVN 440


>gi|254695093|ref|ZP_05156921.1| flagellar hook protein FlgE [Brucella abortus bv. 3 str. Tulya]
 gi|261215444|ref|ZP_05929725.1| flagellar hook protein flgE [Brucella abortus bv. 3 str. Tulya]
 gi|260917051|gb|EEX83912.1| flagellar hook protein flgE [Brucella abortus bv. 3 str. Tulya]
          Length = 396

 Score = 86.5 bits (212), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 5/123 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M      G++   A   RLSTVADN++N  TVG++  + +FS +V           S V 
Sbjct: 6   MMR---TGVSGMNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAGQYNSGS-VL 61

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASG 119
           +   Y   + G   ST +  D A++G+ +F ++ P G    TR G F    +G LV+++G
Sbjct: 62  TDVRYGISDQGGIRSTSSTTDLAIDGNGYFVVQGPGGSTYLTRAGSFVPDKNGDLVNSAG 121

Query: 120 KYP 122
            Y 
Sbjct: 122 YYL 124



 Score = 66.8 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 22/54 (40%)

Query: 186 LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +      +  G LE+SNA+   E+  MI   + + + + +     + M   + 
Sbjct: 340 PQGDGMGKIMSGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGFELMDVLVN 393


>gi|221199739|ref|ZP_03572782.1| flagellar basal body protein FlaE [Burkholderia multivorans CGD2M]
 gi|221208656|ref|ZP_03581656.1| flagellar basal body protein FlaE [Burkholderia multivorans CGD2]
 gi|221171467|gb|EEE03914.1| flagellar basal body protein FlaE [Burkholderia multivorans CGD2]
 gi|221179978|gb|EEE12382.1| flagellar basal body protein FlaE [Burkholderia multivorans CGD2M]
          Length = 413

 Score = 86.5 bits (212), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 63/189 (33%), Gaps = 2/189 (1%)

Query: 8   GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVASGKEY 65
           GL+        L  + +N++N +TVGF++   +FS++           Q     A     
Sbjct: 6   GLSGLAGASNALDVIGNNIANANTVGFKSSTAQFSDMYANSIATSVNTQIGIGTALASVQ 65

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125
                G+  +T + LD A+ G+ +F + +   I  TRDG F+   +G +V++ G   +  
Sbjct: 66  QQFGQGTINTTNSSLDVAINGNGFFQMSNNGTITYTRDGTFQRDKNGYIVNSQGLNLMGY 125

Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185
            A     I     +        I+       T             +              
Sbjct: 126 AADKNGVINTAQTVPLQAPTTNIAPTATTKITGQFNLNSQDTVPTKTPFDATDTTTYNYS 185

Query: 186 LEDLSGVTV 194
                  ++
Sbjct: 186 TSIQVYDSL 194



 Score = 67.2 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 20/166 (12%), Positives = 47/166 (28%), Gaps = 6/166 (3%)

Query: 80  LDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEI 139
              A  G   F + +  G    +     +T         G   +         +      
Sbjct: 247 TPTAALGQFQFTVPNTDGSATPQTLTLDLTGTTQYGGKDGVNNLAQDGYASGTLTTFTIG 306

Query: 140 FNVGEKGEISQ-KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVT 193
            +    G  S  +  V+  + L + +   G V    +  +        +       +  T
Sbjct: 307 TDGKLTGNYSNGQTAVLGQIALANFNNPNGLVNIGGNQYAETAASGVPQISVPGSTNHGT 366

Query: 194 VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           ++   LE+SN +   ++  +I   + + +    I   +      I 
Sbjct: 367 LQGSALENSNVDLTSQLVNLITAQRNYQANAQTIKTQQTVDQTLIN 412


>gi|13472592|ref|NP_104159.1| flagellar hook protein FlgE [Mesorhizobium loti MAFF303099]
 gi|14023338|dbj|BAB49945.1| flagellar hook protein; FlgE [Mesorhizobium loti MAFF303099]
          Length = 418

 Score = 86.5 bits (212), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 36/124 (29%), Positives = 56/124 (45%), Gaps = 5/124 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M      G++   A   RLST ADN++N+DT G++    +FS ++             V 
Sbjct: 6   MMR---TGVSGMNAQANRLSTTADNIANSDTTGYKRSSAEFSTLIMPSTGGAYNSG-GVT 61

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASG 119
           +       + G    T +  D A+ GD +F ++ P G   LTR G F     G LV+A+G
Sbjct: 62  TTIRQAVSDPGVLQYTTSVSDLAVSGDGFFVVQDPSGTPFLTRAGAFVPDAQGRLVNAAG 121

Query: 120 KYPV 123
              +
Sbjct: 122 FQLM 125



 Score = 81.5 bits (199), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 30/241 (12%), Positives = 69/241 (28%), Gaps = 22/241 (9%)

Query: 21  TVADNM--SNTDTVGF--RTIKVKFS--------EVVGAIKNDIDQKISFVASGKEYLSK 68
             A N+  +N  T  +  ++  V +         +V          +++     K     
Sbjct: 175 VAAANLPGANASTAQYTSKSSMVAYDNLGNKKLLDVYFTNTGTGTWQVAVFDQSKATPGT 234

Query: 69  EVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMAS 128
                       +   +        +P  +  T  G   +  D S ++  G    +  A 
Sbjct: 235 SFPYTGGALGTANLTFDTTTGKLTGAPTSVSFTVPGGASLNLDLSKLTQLGTGFTVSDAQ 294

Query: 129 VPIQIPQKDEIFNVGEKGEISQK-----GKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183
           V    P   +   + + G I  +      K +  + L  V           +  +     
Sbjct: 295 VNGNAPSTIDKVQISKDGTIYAQYKDGSTKPLYKIPLADVQSPDQLKALPGNVYAQGTDS 354

Query: 184 TPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
             +      +    ++  G LE+SN +   E+  MI   + + + + +       M   +
Sbjct: 355 GAIRVGFANEGKAGSIISGALENSNVDIAEELTDMIAAQRSYTANSKVFQTGSDLMDVLV 414

Query: 239 R 239
            
Sbjct: 415 N 415


>gi|295700205|ref|YP_003608098.1| fagellar hook-basal body protein [Burkholderia sp. CCGE1002]
 gi|295439418|gb|ADG18587.1| fagellar hook-basal body protein [Burkholderia sp. CCGE1002]
          Length = 383

 Score = 86.5 bits (212), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 35/167 (20%), Positives = 71/167 (42%), Gaps = 3/167 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVAS 61
           S+  GL+   A    L  + +N++N  TVGF+     FS++          +Q    VA+
Sbjct: 2   SYQTGLSGLHAASNDLDVIGNNIANAHTVGFKQGTAVFSDMYANAMLGATNNQIGIGVAT 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
                    G+   TG  LD  + G+ +F L      + +R+G+F+   DG+++S+    
Sbjct: 62  SAIVRDFSEGTPTQTGNPLDLDIRGNGFFLLSQNGTPVYSRNGQFQQDSDGNIISSGNGL 121

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
           P++  A  P  +     +  +      +      + +  +S +++ G
Sbjct: 122 PLMGYAEGPNGVVDTSRLVQLTTATVANLPPMPTSAIA-WSFNLNAG 167


>gi|78776232|ref|YP_392547.1| hypothetical protein Suden_0031 [Sulfurimonas denitrificans DSM
           1251]
 gi|78496772|gb|ABB43312.1| conserved hypothetical protein [Sulfurimonas denitrificans DSM
           1251]
          Length = 430

 Score = 86.5 bits (212), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 4/129 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +F  G+    + +  +  +ADN++NT T+GFR    +FS +     +      + + 
Sbjct: 2   MIQAFYTGINGIKSHQTSIDVIADNLANTSTLGFRGYTAEFSSLFEKSLSTTADINAGIG 61

Query: 61  SGKEYLSKEVGSFIST----GTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVS 116
            G    +  +   + T        D A+ GD WF ++     + TRDG F    +  LV+
Sbjct: 62  LGSRVNAITMNDSVGTLQLSERSTDMAIMGDGWFGIQGEGSPLYTRDGSFTFDRERDLVT 121

Query: 117 ASGKYPVLD 125
           A G Y +  
Sbjct: 122 ADGYYVLGT 130



 Score = 55.6 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 12/132 (9%), Positives = 35/132 (26%), Gaps = 8/132 (6%)

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
           +        +                       +     I ++ +Y     +   R   S
Sbjct: 296 NPFSGSSTSNGTQSGELQGYDINKNAQIVATFSNGMQSAIGSVAVYHFQNDKALERAGGS 355

Query: 176 GISPNIPPTPLEDLSGVT--------VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
             S +                     +    LE SN      + ++I + + +++ +  I
Sbjct: 356 RFSESTNSGKPIFFKDANGKNIVGTDLSNFKLEGSNVRMEVALTEIIVMQRSYDANSKCI 415

Query: 228 DENEKSMLEAIR 239
              ++ + +A+ 
Sbjct: 416 TTADQMLQKALS 427


>gi|229592130|ref|YP_002874249.1| flagellar hook protein FlgE [Pseudomonas fluorescens SBW25]
 gi|229363996|emb|CAY51545.1| putative flagellar hook protein [Pseudomonas fluorescens SBW25]
          Length = 434

 Score = 86.5 bits (212), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 3/125 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--ISFVAS 61
           SFNIGL+   A  ++L    +N++N  T GF++ + +FS++  A K    Q    + V  
Sbjct: 2   SFNIGLSGLYAANKQLDVTGNNIANVATTGFKSSRAEFSDIYAASKLGTGQNSIGNGVNL 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLVSASGK 120
                    G   ++G  LD A++G  +F  +   G +  TR G F+   DG + + +G 
Sbjct: 62  AAVSQQFTQGDVNNSGGVLDMAIQGGGFFVQKGSDGSLEYTRSGAFRADKDGYITNNTGT 121

Query: 121 YPVLD 125
             +  
Sbjct: 122 SRLQG 126



 Score = 70.3 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 39/128 (30%), Gaps = 5/128 (3%)

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           +    P  D  +       K +   V      +Q+ K I  + L S +  QG      + 
Sbjct: 305 SYRNPPTTDGYATGQITGLKIDGSGVLFATFSNQQSKAIGQISLASFNNEQGLQPSGGTT 364

Query: 177 ISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
                          +  +  ++    LE+SN N   E+  +I     + +    I    
Sbjct: 365 WRETFASGQPGYDTPQAGTLGSIVANSLENSNVNLTNELVDLIKAQSNYQANAKTISTQS 424

Query: 232 KSMLEAIR 239
             M   I+
Sbjct: 425 TIMQTIIQ 432


>gi|254251191|ref|ZP_04944509.1| flagellar hook protein FlgE [Burkholderia dolosa AUO158]
 gi|124893800|gb|EAY67680.1| flagellar hook protein FlgE [Burkholderia dolosa AUO158]
          Length = 413

 Score = 86.5 bits (212), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 56/135 (41%), Gaps = 2/135 (1%)

Query: 8   GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVASGKEY 65
           GL+        L  + +N++N +TVGF++   +FS++           Q           
Sbjct: 6   GLSGLAGASSALDVIGNNIANANTVGFKSSTAQFSDMYANSIATSVNTQIGIGTTLASVQ 65

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125
                G+  +T + LD A+ G+ +F + +   I  TRDG F+   +G +V++ G   +  
Sbjct: 66  QQFAQGTINTTNSSLDVAINGNGFFQMSNNGVITYTRDGTFQRDKNGYIVNSQGMNLMGY 125

Query: 126 MASVPIQIPQKDEIF 140
            A     I     + 
Sbjct: 126 AAGANGVINTAQTVP 140



 Score = 66.0 bits (159), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 11/98 (11%), Positives = 32/98 (32%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLED 201
             + +  V+  + + + +   G V    +           +       +  T++   LE+
Sbjct: 315 YSNGQTAVLGQIAIANFNNPNGLVAIGGNQFVETAASGVPQISAPGSTNHGTLQGSALEN 374

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   ++  +I   + + +    I   +      I 
Sbjct: 375 SNVDLTSQLVNLITAQRNYQANAQTIKTQQTVDQTLIN 412


>gi|323699248|ref|ZP_08111160.1| fagellar hook-basal body protein [Desulfovibrio sp. ND132]
 gi|323459180|gb|EGB15045.1| fagellar hook-basal body protein [Desulfovibrio desulfuricans
           ND132]
          Length = 541

 Score = 86.1 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 59/177 (33%), Gaps = 16/177 (9%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID---------- 53
           S  +G    +A  Q +S +A+N++N +T+G++   + F +++                  
Sbjct: 5   SMYVGATGVIAHSQGMSVLANNLANVNTIGYKRSDILFGDLISQQVATGGALYDNGDVRI 64

Query: 54  -QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-----LTRDGRFK 107
            Q    VA          G+   T    D A+ G  +F +  P G I      TR G F+
Sbjct: 65  NQMGMGVAVSAIRGIFTEGALSETTEATDLAISGQGFFGVNDPSGTIRGASHYTRAGDFR 124

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
             ++  LV++ G                           ++   G+    +      
Sbjct: 125 FDNEAYLVNSEGYRLQGFAYDRETGEWATAVSDVQLPYEDVDVDGQTARVVRSQPFA 181



 Score = 73.0 bits (177), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 13/99 (13%), Positives = 31/99 (31%), Gaps = 5/99 (5%)

Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLE 200
              + + + +  + +Y  +   G  R   +                       + +  LE
Sbjct: 440 HFTNGQTEELYQVAVYKFNSPWGLRRDGGTNFVATEASGTAMVGTAGDRGRGIINQNSLE 499

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +SN +   E   MI   + + + T +I   +  +   I 
Sbjct: 500 ESNVDMSTEFSNMILTQRGYQANTKVITTADSMLNTLIS 538


>gi|304310787|ref|YP_003810385.1| Flagellar basal body FlaE [gamma proteobacterium HdN1]
 gi|301796520|emb|CBL44728.1| Flagellar basal body FlaE [gamma proteobacterium HdN1]
          Length = 447

 Score = 86.1 bits (211), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 5/135 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV--GAIKNDIDQKISFVAS 61
           SFNI ++   A +  L   ++N++N  T GF+  + +F ++   GA  +      S V  
Sbjct: 2   SFNIAISGLKAAQSDLEVTSNNIANVATTGFKKSRAEFGDIYATGAFGSTKTAIGSGVLL 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESP---RGIILTRDGRFKVTDDGSLVSAS 118
                    G+   T   LDF + G+ +F +         I TR G F V  DG++V++S
Sbjct: 62  QAVSQQFNQGNMNFTQNTLDFGVSGEGFFVMSPNIGSSERIYTRAGAFGVNADGNVVNSS 121

Query: 119 GKYPVLDMASVPIQI 133
            +   +   +    +
Sbjct: 122 DQLLQVFPVNEDGTV 136



 Score = 73.7 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 17/125 (13%), Positives = 35/125 (28%), Gaps = 5/125 (4%)

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                D  S+      + +   +      + +   +  + L      QG  +  N+    
Sbjct: 321 NTLTQDGFSIGRLTGIEVDDSGLVRAAYSNGQTVSVGKVALARFPNPQGLSQIGNTSWKE 380

Query: 180 NIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
                        T     ++ G LE SN +   E+  +I   + F +    I+      
Sbjct: 381 TSASGEALAGEAGTSSYGLIRAGALEVSNVDLTTELVGLITAQRNFQANAKSIETTNTVT 440

Query: 235 LEAIR 239
              I 
Sbjct: 441 NAIIN 445


>gi|77463652|ref|YP_353156.1| flagellar hook protein FlgE [Rhodobacter sphaeroides 2.4.1]
 gi|77388070|gb|ABA79255.1| flagellar hook protein FlgE [Rhodobacter sphaeroides 2.4.1]
          Length = 423

 Score = 86.1 bits (211), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 45/201 (22%), Positives = 79/201 (39%), Gaps = 10/201 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--ISFVAS 61
           S N  L+   A +  ++  + N++N  T+GFR  + +F++V  +    I +    S V +
Sbjct: 2   SINTALSGLSAAQHDIAATSHNIANVGTIGFRGSRAEFADVFNSSPYSISRTAVGSGVQT 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESP-------RGIILTRDGRFKVTDDGSL 114
            +  +    GS ++TG  LD A+EG  +FA E            I TR G F +  +G  
Sbjct: 62  LRTAMQFSQGSVVATGNTLDLAIEGQGFFATEPAVGPNSAKPEPIYTRAGAFGLNAEGVA 121

Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174
           ++ASG+  +    SV      +           ++    V  +    SVD+         
Sbjct: 122 INASGQKLLAWPVSVEGDALSQVPGSATPLTIPLTMGSPVGTSTVALSVDLPTDNAMLGT 181

Query: 175 SGISPNIPPT-PLEDLSGVTV 194
               P      P +  +   V
Sbjct: 182 QAAVPPAAAFDPADPTTYAAV 202



 Score = 75.7 bits (184), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 27/214 (12%), Positives = 64/214 (29%), Gaps = 13/214 (6%)

Query: 35  RTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDF--ALEGDAW-FA 91
           +   V+ +       N          + +  ++ E  +        D   AL G     +
Sbjct: 211 KGNAVEAAAYFIKTANPTAGNPQTDWAVRLVVAGEPLTPAQGDLTFDATGALSGGTGALS 270

Query: 92  LESPRGIILTRDGR-FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ 150
             +  G   T D    ++ D    V+   +      A   +++     ++     G    
Sbjct: 271 FTAASGSSYTLDLTETQLADRSFEVNTVSQDGKSASALTSLEVDASGTVWAAYGAGSPVA 330

Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNAN 205
            G+V+    L +    Q   +   SG +                    ++ G LE +N +
Sbjct: 331 MGQVV----LVTFANPQALRQLGASGFAATADSGQPVAGTAGDSGFGIIRAGALEHANVD 386

Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              E+  +I   + + +    ++ +   M   + 
Sbjct: 387 LTEELVHLITAQRNYQASAKAMETSNSLMQTIMN 420


>gi|90415318|ref|ZP_01223252.1| flagellar hook protein FlgE [marine gamma proteobacterium HTCC2207]
 gi|90332641|gb|EAS47811.1| flagellar hook protein FlgE [marine gamma proteobacterium HTCC2207]
          Length = 944

 Score = 86.1 bits (211), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 30/123 (24%), Positives = 56/123 (45%), Gaps = 3/123 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG--AIKNDIDQKISFVAS 61
           SF   L    A   +L+  ++N++N+ T GF+     F ++     ++         V+ 
Sbjct: 2   SFYTSLTGLNAATTQLAVTSNNIANSGTGGFKRSDTDFGDIFATSPLEKASSVVGRGVSL 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGK 120
            +       G+   +   LD A+ GD +F LES  G  I TR+G F + +   +V+++G+
Sbjct: 62  KEVSQEFSQGNIEFSANSLDLAITGDGFFPLESSDGTKIYTRNGAFMLNEQNQMVNSAGQ 121

Query: 121 YPV 123
              
Sbjct: 122 ALQ 124



 Score = 72.2 bits (175), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 12/90 (13%), Positives = 29/90 (32%), Gaps = 5/90 (5%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYE 209
           +  + L +    +G  +  ++                      T++ G  E SN +   E
Sbjct: 852 LGKIILANFATPKGLRQVGDTSYYATSVSGDANLGEPGAAGFGTIRAGARERSNVDLTAE 911

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +  +I   + F +    I+ +       I+
Sbjct: 912 LVDLITAQRNFQANAKAIETSSSLTQTIIQ 941


>gi|297569153|ref|YP_003690497.1| fagellar hook-basal body protein [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296925068|gb|ADH85878.1| fagellar hook-basal body protein [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 806

 Score = 86.1 bits (211), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 26/208 (12%), Positives = 55/208 (26%), Gaps = 6/208 (2%)

Query: 38  KVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG 97
           ++   + V     D   +++F       + +  G            + G           
Sbjct: 596 RLVIRDRVADPGGDEASQLNFRIMAYTDMEEIFGPADMDDFGDFHVISGSPERNGSQTGT 655

Query: 98  IILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI-A 156
            +  R G  +        ++S              +            G  S    ++ A
Sbjct: 656 AVDNRFGDTEAMFTTQYANSSTTIYQDQNGFAAGFLQSVSVDTAGIITGNFSNGQVLMQA 715

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMG 211
            + L      QG  +   +                 T     +    LE SN +   E  
Sbjct: 716 KVALADFANLQGLHKVGGNIFRATTQSGAPVTGEPGTNGLGEIAPNSLEMSNVDLGTEFV 775

Query: 212 QMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +MI   + F + + +I   ++ + E I 
Sbjct: 776 KMITTQRGFQANSKMITTTDEMLNELIN 803



 Score = 83.4 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 61/185 (32%), Gaps = 6/185 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---DIDQKISFVA 60
           S   G++    +   +S + DN++N +TV F + +  F +V+    +      Q    V 
Sbjct: 6   SLYAGISGLSTMGNGMSVLGDNIANVNTVAFNSSRSTFQDVLSQSVSTAAGTAQVGRGVT 65

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG---IILTRDGRFKVTDDGSLVSA 117
                     GSF ST T  D A+ G+ +F L         + TR G F+    G L S 
Sbjct: 66  LTTVDGLFAQGSFESTSTPTDMAIGGEGFFMLRGGDSAEADMFTRAGEFRFDQHGFLTSP 125

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177
            G +             +        ++     + + I  +      + Q          
Sbjct: 126 GGHFVQGWSVDKNTGQIEGTIGDIRMDRSTPPVQTEQIDLIVNLDARVDQASASTLYDSW 185

Query: 178 SPNIP 182
           +    
Sbjct: 186 NGTAD 190


>gi|229017042|ref|ZP_04173962.1| Flagellar hook protein flgE [Bacillus cereus AH1273]
 gi|229023223|ref|ZP_04179734.1| Flagellar hook protein flgE [Bacillus cereus AH1272]
 gi|228738148|gb|EEL88633.1| Flagellar hook protein flgE [Bacillus cereus AH1272]
 gi|228744313|gb|EEL94395.1| Flagellar hook protein flgE [Bacillus cereus AH1273]
          Length = 407

 Score = 86.1 bits (211), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 65/197 (32%), Gaps = 13/197 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49
           M  +    +    A +  LS  ++N++N  TVG++  K  F +++               
Sbjct: 1   MIKALYTSITGLNATQNALSVTSNNIANAQTVGYKKQKAMFDDLLYNNSIGAKGDDRYAG 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107
            +     + V           G+   TG ++  A+EG+ +F         +  TR G F 
Sbjct: 61  TNPKSIGNGVKMSGTVTDYSDGTITLTGGKVQAAMEGNGFFVVGDSKAGNMEFTRKGTFA 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           ++ D  + +  G+Y     A           I    +    S  G +  + G+   ++  
Sbjct: 121 ISSDYYITNTGGQYVFAYPADPSTGNVDLSGIPGPLQIPMGSAIGGIRTSKGIVGGNIPA 180

Query: 168 GFVRRENSGISPNIPPT 184
                     + +    
Sbjct: 181 DAKHITQELPAYDDAGN 197



 Score = 63.7 bits (153), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 12/93 (12%), Positives = 30/93 (32%), Gaps = 5/93 (5%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYE 209
              + +  +    G ++  N   +       L            V+ G  E +N +   E
Sbjct: 315 AGQLAVGMLPNEGGLMKTGNGNFTATNTTGILALGVSGQNGAGKVRGGAQEGANVDLSVE 374

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
              ++   + F     +I  +++ + E +  I 
Sbjct: 375 FVDLMLYQRGFQGNAKVIKISDEVLTEVVNLIR 407


>gi|304409978|ref|ZP_07391597.1| fagellar hook-basal body protein [Shewanella baltica OS183]
 gi|307302309|ref|ZP_07582067.1| fagellar hook-basal body protein [Shewanella baltica BA175]
 gi|304351387|gb|EFM15786.1| fagellar hook-basal body protein [Shewanella baltica OS183]
 gi|306914347|gb|EFN44768.1| fagellar hook-basal body protein [Shewanella baltica BA175]
          Length = 453

 Score = 85.7 bits (210), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 38/125 (30%), Positives = 62/125 (49%), Gaps = 5/125 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61
           SFNI L+   A ++ L+T A+N++N +T+GF+  + +F++V       N        VA+
Sbjct: 2   SFNIALSGIAAAQKDLNTTANNIANANTIGFKESRAEFADVYANSIFSNAKTAVGGGVAT 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII---LTRDGRFKVTDDGSLVSAS 118
            +       GS   T   LD A++G  +F   S  G +    TR G FKV  +  +V ++
Sbjct: 62  SQVAQQFHQGSLQLTSNSLDMAIKGGGFFVTSSELGTLDHSFTRAGAFKVDSNNYMVDSA 121

Query: 119 GKYPV 123
           G Y  
Sbjct: 122 GNYLQ 126



 Score = 62.2 bits (149), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 13/90 (14%), Positives = 32/90 (35%), Gaps = 5/90 (5%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYE 209
           +A + L      QG  +  N+    ++             +  ++    LE SN +   E
Sbjct: 362 LARVALVRFANEQGLTQVGNTSWKASLASGQALAGEANSGTFGSISSSALEQSNIDLTTE 421

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +  +I   + F + +  ++ N       ++
Sbjct: 422 LVDLISAQRNFQANSRTLEVNNTLQQTILQ 451


>gi|283852232|ref|ZP_06369505.1| protein of unknown function DUF1078 [Desulfovibrio sp. FW1012B]
 gi|283572458|gb|EFC20445.1| protein of unknown function DUF1078 [Desulfovibrio sp. FW1012B]
          Length = 518

 Score = 85.7 bits (210), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 77/200 (38%), Gaps = 8/200 (4%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI----DQKIS 57
            T+   G++  L+  Q ++  ++N++NT+TVG+++ ++ F++++  +         Q   
Sbjct: 1   MTAIWTGVSGMLSYSQGIANTSNNLANTNTVGYKSSRMLFADMISELAGSTTDTNSQIGM 60

Query: 58  FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR---GIILTRDGRFKVTDDGSL 114
            V  G   +S  VG+  +    +D A++G+  +             TR G F    DG L
Sbjct: 61  GVQVGTVSMSTGVGAIATGDQSMDMAIDGEHGYFTVKDPVSDKTYYTRAGDFNFNTDGYL 120

Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174
           VS +G             + Q +   +V  +  ++     I          + G V    
Sbjct: 121 VSPTGNRVQGWAVDQAA-VTQAERTGSVLPEVPVTGDPTDIRITDFTLPAQATGSVSMIT 179

Query: 175 SGISPNIPPTPLEDLSGVTV 194
           +  S   P          ++
Sbjct: 180 NLDSLTDPGILDATDPYCSM 199



 Score = 73.7 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/143 (16%), Positives = 45/143 (31%), Gaps = 7/143 (4%)

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           TR+     T      S+  +    D  +         +   V      + + K +  + L
Sbjct: 374 TRNAVACTTS--YATSSYTQAQSQDGFASGTLNSTSVDENGVVSGTFSNGQTKDLYVLAL 431

Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIH 215
                     R  N+ +S              +     +    LE SN +   EM  +I 
Sbjct: 432 ADFRNPTDLRREGNNLLSATTESGAATTGRANSGIYDGISGYSLESSNVDMATEMVNLIT 491

Query: 216 LTQKFNSITTLIDENEKSMLEAI 238
           L + F S + ++   +  M +A+
Sbjct: 492 LQRAFQSNSKVVTTADTMMEKAL 514


>gi|297183504|gb|ADI19634.1| flagellar hook protein flge [uncultured delta proteobacterium
           HF0770_45N15]
          Length = 494

 Score = 85.7 bits (210), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 47/125 (37%), Gaps = 5/125 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV---GAIKNDIDQKISFVA 60
           S   G +      + +    +N+SN +T GF+   + F +++           +  + V 
Sbjct: 6   SLQTGASGVKTYGKAMQVTGNNISNVNTFGFKRNIIAFEDLLGNDYPQGRSFTKVSNGVK 65

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESP--RGIILTRDGRFKVTDDGSLVSAS 118
            G   +    G+  ST    D A+ G  +F +  P       TR+G+     DG L +  
Sbjct: 66  IGSVEMEVSQGALESTQLTTDLAIAGGGYFTVIDPSTSNEYFTRNGQMSYDKDGFLATPR 125

Query: 119 GKYPV 123
           G    
Sbjct: 126 GYRVQ 130



 Score = 81.1 bits (198), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 24/208 (11%), Positives = 55/208 (26%), Gaps = 10/208 (4%)

Query: 40  KFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTEL---DFALEGDAWFALESPR 96
            F    G +  D                                D  + G       +P 
Sbjct: 286 SFEAQPGGVGPDGQPLPGGPPRLIPQPVDPETGVPQFAVPFNGEDPIVLGLHLGDGFNPD 345

Query: 97  GIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156
                R G   +T      +        + +     I  + +    G     S   + I 
Sbjct: 346 DPTDPRTGLDGITQFAGKYNVVEASADGNGSGNLESIFVEADGTVTGVF--DSGYNRPIG 403

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMG 211
            + L   D +    +  ++ +   +           T     ++   LE SN +   E  
Sbjct: 404 RIILTKFDNAGKLAQLGDNLLVETLSSGKKVTGEPGTAGFGEIRSQMLEQSNVDLSLEFV 463

Query: 212 QMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +MI   + F +    +  +++ +++ + 
Sbjct: 464 KMIESQRAFQANAKTVTTSDEMIVDLVN 491


>gi|126462484|ref|YP_001043598.1| flagellar basal body FlaE domain-containing protein [Rhodobacter
           sphaeroides ATCC 17029]
 gi|126104148|gb|ABN76826.1| flagellar basal body FlaE domain protein [Rhodobacter sphaeroides
           ATCC 17029]
          Length = 423

 Score = 85.7 bits (210), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 45/201 (22%), Positives = 79/201 (39%), Gaps = 10/201 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--ISFVAS 61
           S N  L+   A +  ++  + N++N  T+GFR  + +F++V  +    I +    S V +
Sbjct: 2   SINTALSGLSAAQHDIAATSHNIANVGTIGFRGSRAEFADVFNSSPYSISRTAVGSGVQT 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESP-------RGIILTRDGRFKVTDDGSL 114
            +  +    GS ++TG  LD A+EG  +FA E            I TR G F +  +G  
Sbjct: 62  LRTAMQFSQGSVVATGNTLDLAIEGQGFFATEPAVGPNSAKPEPIYTRAGAFGLNAEGVA 121

Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174
           ++ASG+  +    SV      +           ++    V  +    SVD+         
Sbjct: 122 INASGQKLLAWPVSVEGDALSQVPGSATPLTIPLTMGSPVGTSTVALSVDLPTDNAMLGT 181

Query: 175 SGISPNIPPT-PLEDLSGVTV 194
               P      P +  +   V
Sbjct: 182 QAAVPPAAAFDPADPTTYAAV 202



 Score = 75.7 bits (184), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 27/214 (12%), Positives = 64/214 (29%), Gaps = 13/214 (6%)

Query: 35  RTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDF--ALEGDAW-FA 91
           +   V+ +       N          + +  ++ E  +        D   AL G     +
Sbjct: 211 KGNAVEAAAYFIKTANPTAGNPQTDWAVRLVVAGEPLTPAQGDLTFDATGALSGGTGALS 270

Query: 92  LESPRGIILTRDGR-FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ 150
             +  G   T D    ++ D    V+   +      A   +++     ++     G    
Sbjct: 271 FTAASGNSYTLDLTETQLADRSFEVNTVSQDGKSASALTSLEVDASGTVWAAYGAGSPVA 330

Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNAN 205
            G+V+    L +    Q   +   SG +                    ++ G LE +N +
Sbjct: 331 MGQVV----LVTFANPQALRQLGASGFAATADSGQPVAGTAGDSGFGIIRAGALEHANVD 386

Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              E+  +I   + + +    ++ +   M   + 
Sbjct: 387 LTEELVHLITAQRNYQASAKAMETSNSLMQTIMN 420


>gi|307823531|ref|ZP_07653760.1| fagellar hook-basal body protein [Methylobacter tundripaludum SV96]
 gi|307735516|gb|EFO06364.1| fagellar hook-basal body protein [Methylobacter tundripaludum SV96]
          Length = 597

 Score = 85.7 bits (210), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 32/134 (23%), Positives = 57/134 (42%), Gaps = 18/134 (13%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVAS 61
           SF   L+   A    L    +N++N+ TVGF+  + +F++V  +    +   Q  S V  
Sbjct: 2   SFATALSGLQAASTNLQVTGNNIANSQTVGFKESRAEFADVYASSIGGVSKTQPGSGVKV 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWF----------------ALESPRGIILTRDGR 105
            +     + G+   T   LD AL G+ +F                 ++       TR+G 
Sbjct: 62  TEVAQQFKDGTIDPTSNSLDLALSGNGFFVLADTVNLPDPANPTAPVDPSVPTSYTRNGA 121

Query: 106 FKVTDDGSLVSASG 119
           FK+   G++V++ G
Sbjct: 122 FKLDSSGNVVNSQG 135



 Score = 61.0 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 11/93 (11%), Positives = 32/93 (34%), Gaps = 5/93 (5%)

Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANS 206
            K +  + L     +Q   +  ++  +                +  T++   LE S  + 
Sbjct: 504 SKTLGQVALARFQSNQSLAKLGDTAWAKTSSSGAPIYGAAGDNNFGTIQSSALESSTVDL 563

Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             ++ ++I   Q + + +  I   +  +   +R
Sbjct: 564 SAQLVKLIIAQQAYQANSQTITTEKTLVETILR 596


>gi|146277708|ref|YP_001167867.1| flagellar basal body FlaE domain-containing protein [Rhodobacter
           sphaeroides ATCC 17025]
 gi|145555949|gb|ABP70562.1| flagellar basal body FlaE domain protein [Rhodobacter sphaeroides
           ATCC 17025]
          Length = 423

 Score = 85.7 bits (210), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 44/174 (25%), Positives = 74/174 (42%), Gaps = 9/174 (5%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--ISFVAS 61
           S N  L+   A +  ++  + N++N  T+GFR  + +F++V  +    I +    S V +
Sbjct: 2   SINTALSGLSAAQHDIAATSHNIANVGTIGFRGSRAEFADVFNSSPYSIARTAVGSGVQT 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESP-------RGIILTRDGRFKVTDDGSL 114
            +  +    GS ++TG  LD A+EG  +FA E            I TR G F + D G  
Sbjct: 62  LRTAMQFSQGSVVATGNTLDLAIEGQGFFATEPAVGPNSAKPEPIYTRAGAFGLNDKGVA 121

Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
           V+ASG+  +    SV      +     V     ++    V       +VD+   
Sbjct: 122 VNASGQKLLAWPVSVEGDALSQVPGTAVPLTIPLTMGSPVGTKAVRMTVDLPTD 175



 Score = 76.1 bits (185), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 25/214 (11%), Positives = 63/214 (29%), Gaps = 13/214 (6%)

Query: 35  RTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFA---LEGDAWFA 91
           +   V+ +      +N          + +  ++ E  +        D       G    +
Sbjct: 211 KGNAVEAAAYFIKTENPAAGSPDTGWAVRLVVAGETLTPAEGDLAFDATGALAGGTGSLS 270

Query: 92  LESPRGIILTRDGRFKV-TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ 150
             +  G   T D      T+    V+   +      A   +++     ++     G+   
Sbjct: 271 FTTGIGTPYTLDLTGTALTNRSFEVNTVNQDGKSAAALTSLEVDASGTVWAAYGAGDSVA 330

Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNAN 205
            G+V+    L +    Q   +   SG +                    ++ G LE +N +
Sbjct: 331 MGQVV----LVTFANPQALRQLGASGFAATADSGQPVAGTAGDSGFGIIRAGALEHANVD 386

Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              E+  +I   + + +    ++ +   M   + 
Sbjct: 387 LTEELVHLITAQRNYQASAKAMETSNSLMQTIMN 420


>gi|153011508|ref|YP_001372722.1| flagellar hook protein FlgE [Ochrobactrum anthropi ATCC 49188]
 gi|151563396|gb|ABS16893.1| flagellar basal body FlaE domain protein [Ochrobactrum anthropi
           ATCC 49188]
          Length = 426

 Score = 85.7 bits (210), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 5/131 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M      G++   A   RLS VADN++N  TVG++  + +FS +V           S V 
Sbjct: 35  MMR---TGVSGMNAQANRLSAVADNIANASTVGYKRAETQFSSLVLPSTGGQYNSGS-VL 90

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASG 119
           +   Y   + G   ST +  D A++G+ +F ++ +     LTR G F    +G+LV+++G
Sbjct: 91  TDVRYGISDQGGIRSTSSTTDLAIDGNGYFVVQGADGSTFLTRAGSFVPDKNGNLVNSAG 150

Query: 120 KYPVLDMASVP 130
            Y +    + P
Sbjct: 151 YYLLGAGPNDP 161



 Score = 69.9 bits (169), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 24/193 (12%), Positives = 54/193 (27%), Gaps = 8/193 (4%)

Query: 47  AIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106
            +KN  D  +    +   +         + G  +D    G     L         R G +
Sbjct: 239 TVKNAADDAVVGGPTTLTFDPTTGDMTSAGGVAVDLGPYGGQNLNLNLGASTQ--RAGDY 296

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
            ++                +  V +               ++  +  +        + + 
Sbjct: 297 TISQA-----QINGQAPSAVKGVDVANDGSVVAIYENGTQKVLARIPLANVASPDRMTVV 351

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
            G V   ++         P +      V  G LE+SNA+   E+  MI   + + + + +
Sbjct: 352 SGNVFLPSADSGDVRLGFP-QSDGMGKVMSGTLEESNADIAQELTDMIEAQRSYTANSKV 410

Query: 227 IDENEKSMLEAIR 239
                + M   + 
Sbjct: 411 FQTGSELMDVLVN 423


>gi|90579909|ref|ZP_01235717.1| flagellar hook protein [Vibrio angustum S14]
 gi|90438794|gb|EAS63977.1| flagellar hook protein [Vibrio angustum S14]
          Length = 467

 Score = 85.7 bits (210), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 35/131 (26%), Positives = 61/131 (46%), Gaps = 6/131 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61
           S NI L+   A ++ L+T ++N++N +T GF+  + +F +V       N        V +
Sbjct: 2   SMNIALSGLGAAQKDLNTTSNNIANANTFGFKESRAEFGDVYSNSIFSNAKTTTGGGVQT 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFAL----ESPRGIILTRDGRFKVTDDGSLVSA 117
                    GS I T   LD  + G  +FA+      P    LTR+G F + ++  LV++
Sbjct: 62  STVAQQFHEGSSIYTNNPLDLRVSGSGFFAVADNKNEPANNNLTRNGAFHLNNENELVNS 121

Query: 118 SGKYPVLDMAS 128
            GK+ +    +
Sbjct: 122 EGKFLLGYPVN 132



 Score = 69.9 bits (169), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 47/146 (32%), Gaps = 7/146 (4%)

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK--VIATM 158
           T+       D     SA       D+         K +I   G        GK  V+  +
Sbjct: 320 TQSLTMNYDDPTQYASAFEVRKFQDVDGATTGYLSKVDIDPEGNILASYSNGKDIVVGRV 379

Query: 159 GLYSVDMSQGFVRRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQM 213
            L  V   QG  +   +  +                S  +VK G LE SN +   E+  +
Sbjct: 380 ALARVSNEQGLAQLGGTLWNTTQESGQAIWGDASQGSFGSVKSGTLEQSNIDMTQELVDL 439

Query: 214 IHLTQKFNSITTLIDENEKSMLEAIR 239
           I   + F + +  +D N +     ++
Sbjct: 440 ITAQRNFQASSRALDVNNQLQQNILQ 465


>gi|74317652|ref|YP_315392.1| flagellar hook protein FlgE [Thiobacillus denitrificans ATCC 25259]
 gi|74057147|gb|AAZ97587.1| flagellar hook protein FlgE [Thiobacillus denitrificans ATCC 25259]
          Length = 405

 Score = 85.7 bits (210), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 68/193 (35%), Gaps = 2/193 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA--IKNDIDQKISFVAS 61
           SF  GL+   A  + L  + +N+SN  TVGF+  + +F++V                V  
Sbjct: 2   SFQQGLSGLNAAAKNLDVIGNNVSNASTVGFKQSQAQFADVYANSLTGAGGSSIGIGVKV 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
            +       G+  ST   LD A+ G  +F +++   I   R+G+F++  +G +V+ +G  
Sbjct: 62  AQVAQQFTQGNITSTNNPLDMAINGGGFFRMDNGGEIAYQRNGQFQLDKNGYIVNPTGGK 121

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
                A+    +             +++ +        L                  P  
Sbjct: 122 LTGYTANASGVLSTGAPAPLAINTADLTPQATSEVNAVLNLDSTGTALPAASFDMNDPTT 181

Query: 182 PPTPLEDLSGVTV 194
             +        ++
Sbjct: 182 YHSSTAASVYDSL 194



 Score = 72.6 bits (176), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 12/98 (12%), Positives = 32/98 (32%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLED 201
             + +  V+  + L +     G  +  N+  +             +      ++   +ED
Sbjct: 306 YTNGQSAVLGQVVLANFANPNGLQQMGNNLWTETATSGTPLVGTPDSGGLGVLQSSAVED 365

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E+  MI   + + +    I   +  +   + 
Sbjct: 366 SNVDLTAELVNMITAQRVYQANAQTIKSQDAVLQTLVN 403


>gi|95928662|ref|ZP_01311409.1| protein of unknown function DUF1078-like [Desulfuromonas
           acetoxidans DSM 684]
 gi|95135452|gb|EAT17104.1| protein of unknown function DUF1078-like [Desulfuromonas
           acetoxidans DSM 684]
          Length = 425

 Score = 85.7 bits (210), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 31/128 (24%), Positives = 61/128 (47%), Gaps = 6/128 (4%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA-- 60
           ++   G++      + +S   +N+SN++T+G+++    FS+++ A  +     ++ V   
Sbjct: 5   STLYSGISGLQTNAEAMSVTGNNISNSNTIGYKSSSTVFSDMLSATISTTGTSVNQVGRG 64

Query: 61  --SGKEYLSKEVGSFISTGTELDFALEGDAWFALESP--RGIILTRDGRFKVTDDGSLVS 116
                   +   GSF ST ++ D A+EG  +F L +     ++ TR+G F     G LV+
Sbjct: 65  SELTTVRSNFSQGSFQSTSSDTDLAVEGAGFFMLSAAGTDEVVYTRNGAFHFDPGGYLVN 124

Query: 117 ASGKYPVL 124
           A G     
Sbjct: 125 ADGYRVQG 132



 Score = 84.1 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 23/146 (15%), Positives = 50/146 (34%), Gaps = 4/146 (2%)

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           T+    +        +++      D  +    +        V      + + + IAT+ L
Sbjct: 280 TQSIAIEFDTTQFGRTSTVYSQDQDGYAAGEVVETSINSDGVVSVSYSNGETRDIATLTL 339

Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT----VKRGFLEDSNANSMYEMGQMIHL 216
            +     G V+  NS  S +      +  +       +    LE SN +   E   MI +
Sbjct: 340 ATFTNPGGLVKEGNSLYSASRYSGNPQIGTPGASQGIIYTNSLELSNVDLSQEFVDMITI 399

Query: 217 TQKFNSITTLIDENEKSMLEAIRNIA 242
              +++ + +I   ++ + E I  I 
Sbjct: 400 QNGYSANSKVITTTDEMLQEVINLIR 425


>gi|222084885|ref|YP_002543414.1| flagellar hook protein [Agrobacterium radiobacter K84]
 gi|221722333|gb|ACM25489.1| flagellar hook protein [Agrobacterium radiobacter K84]
          Length = 425

 Score = 85.7 bits (210), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 40/199 (20%), Positives = 79/199 (39%), Gaps = 5/199 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           S    ++   A   RL+TV+DN++N+ T G++     FS +V    +  +     V +  
Sbjct: 6   SMKTAISGMNAQANRLATVSDNIANSSTTGYKQASTSFSSLVLPSSSG-NYNSGGVETTV 64

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122
            Y   + G+  +T +  D A++G+ +F ++S      LTR G F     G+LV+A+G   
Sbjct: 65  RYAISQQGTVSATTSSTDLAIQGNGFFVVQSAAGQTFLTRSGDFSADASGNLVNAAGFTL 124

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM---SQGFVRRENSGISP 179
           +   ++        +    +           V AT           +       ++G  P
Sbjct: 125 MGYSSASGAPSVVVNGFSGMVPINVTPSGTSVAATTVGSMTGNLNSNATIATSSSTGYLP 184

Query: 180 NIPPTPLEDLSGVTVKRGF 198
           +    P+   +  +   G+
Sbjct: 185 SENTYPVTTDTSKSSITGY 203



 Score = 68.7 bits (166), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 16/144 (11%), Positives = 39/144 (27%), Gaps = 5/144 (3%)

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           T+     +T    + +       +D  +                        K +  + L
Sbjct: 279 TQSIAMDMTGFTQVATDFSATGKMDGQAPNPVTSVTIAKDGTVSAVYKDSSTKELYRIPL 338

Query: 161 YSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIH 215
            +V           +  S N           +      ++ G LE+SN +   E+  MI 
Sbjct: 339 ATVASPDSLTLESGNVYSANGDSGVTVTGWPQSGGLGYIQSGALEESNVDLATELTNMIT 398

Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239
             + + + + +       +   + 
Sbjct: 399 AQKSYTANSKVFQAGSDLLDVLVN 422


>gi|229109210|ref|ZP_04238809.1| Flagellar hook protein flgE [Bacillus cereus Rock1-15]
 gi|228674220|gb|EEL29465.1| Flagellar hook protein flgE [Bacillus cereus Rock1-15]
          Length = 406

 Score = 85.7 bits (210), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 63/181 (34%), Gaps = 13/181 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49
           M  +    +    A +  LS  ++N++N  TVG++  K  F +++               
Sbjct: 1   MIKALYTSITGMNATQNALSVTSNNIANAQTVGYKKQKAMFDDLLYNNSIGAKADDKYAG 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107
            +     + V           G+   TG +   A+EG+ +F         +  TR G F 
Sbjct: 61  TNPKSIGNGVKLSGTVTDYSDGTITLTGGKTQAAMEGNGFFVVGDSKGGNMEFTRKGTFG 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           ++ D  + +  G+Y     A+          I    +    +  G +  + G+   ++  
Sbjct: 121 ISSDYYITNTEGQYVFAYPANEATGEVDLSGIPGPLQIPMGTAIGGIRTSKGVVGGNIPA 180

Query: 168 G 168
            
Sbjct: 181 D 181



 Score = 62.6 bits (150), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 11/93 (11%), Positives = 29/93 (31%), Gaps = 5/93 (5%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYE 209
              + +       G ++  N   +       L   +        V+    E +N +   E
Sbjct: 314 AGQLAVAMFPNEGGLMKTGNGNYTATNTTGILALGASGQNGAGKVRGSAQEGANVDLSVE 373

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
              ++   + F     +I  +++ + E +  I 
Sbjct: 374 FVDLMLYQRGFQGNAKVIKVSDEVLNEVVNLIR 406


>gi|229058387|ref|ZP_04196771.1| Flagellar hook protein flgE [Bacillus cereus AH603]
 gi|228719896|gb|EEL71486.1| Flagellar hook protein flgE [Bacillus cereus AH603]
          Length = 407

 Score = 85.7 bits (210), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 63/181 (34%), Gaps = 13/181 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49
           M  +    +    A +  LS  ++N++N  TVG++  K  F +++               
Sbjct: 1   MIKALYTSITGMNATQNALSVTSNNIANAQTVGYKKQKAMFDDLLYNNSIGAKADDKYAG 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107
            +     + V           G+   TG +   A+EG+ +F         +  TR G F 
Sbjct: 61  TNPKSIGNGVKLSGTVTDYSDGTITLTGGKTQAAMEGNGFFVVGDSKGGNMEFTRKGTFA 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           ++ D  + +  G+Y     A+          I    +    +  G +  + G+   ++  
Sbjct: 121 ISSDYYITNTEGQYVFAYPANAATGEVDLSGIPGPLQIPMGTAIGGIRTSKGVVGGNIPA 180

Query: 168 G 168
            
Sbjct: 181 D 181



 Score = 64.5 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 11/93 (11%), Positives = 30/93 (32%), Gaps = 5/93 (5%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYE 209
              + +       G ++  N   +       L   +        ++ G  E +N +   E
Sbjct: 315 AGQLAVAMFPNEGGLMKTGNGNYTATNTTGILALGASGQNGAGKIRGGAQEGANVDLSVE 374

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
              ++   + F     +I  +++ + E +  I 
Sbjct: 375 FVDLMLYQRGFQGNAKVIKISDEVLNEVVNLIR 407


>gi|27904201|gb|AAO27034.1| flagellar basal-body rod protein FlgF [Buchnera aphidicola str. Bp
           (Baizongia pistaciae)]
          Length = 262

 Score = 85.7 bits (210), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 47/245 (19%), Positives = 103/245 (42%), Gaps = 13/245 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M++  N  + +   + +  + +A+N++N  T GF+  +++   ++ + K+   Q+ +F+ 
Sbjct: 15  MESIVNAIITSTNKIFENQARIANNITNISTPGFK-SELELKILLPSQKDQNSQEDNFL- 72

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDA--WFALESPRGIILTRDGRFKVTDDGSLVSAS 118
             K+Y +K  G+   T   LD A+      +     P+ I  T++G FK+  +  L    
Sbjct: 73  -YKQYKNKNQGTLRRTNQPLDCAIIDKNDWFVIKIDPKTIAYTKNGHFKINSNRQL--TV 129

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM--SQGFVRRENSG 176
             +PVL           ++ + +      I +   +   +  + +          + N  
Sbjct: 130 QNHPVLGEDGEIFIPKNENIVISSDGYINIIKNNVLQHKVAQFKLKNFDINDLTYKTNGL 189

Query: 177 ISPN----IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
              N    +  T  +++S + +  G LEDSN N    M +MI   +KF+    ++    +
Sbjct: 190 YLLNKNNKLNHTNHKNVSNIKLVSGILEDSNVNLEENMVEMISNARKFDMQIKILSMYNE 249

Query: 233 SMLEA 237
           +   A
Sbjct: 250 NTQAA 254


>gi|223039214|ref|ZP_03609504.1| flagellar hook protein [Campylobacter rectus RM3267]
 gi|222879575|gb|EEF14666.1| flagellar hook protein [Campylobacter rectus RM3267]
          Length = 543

 Score = 85.7 bits (210), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 48/134 (35%), Gaps = 7/134 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI----KNDIDQKI 56
           M  S   G++        +   A N++N + VG+     +F  +         N+  Q  
Sbjct: 1   MVRSLYNGVSGVKTQSFSMDVWAHNIANINNVGYTASIPEFKSIFYQTSFKAGNNPTQDQ 60

Query: 57  SFVASGKEYL---SKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113
             + +          + G  + T   LD A+ G  +F + +      TR G F V  D  
Sbjct: 61  VGLGATGMTTALSFYKQGPLMKTDNVLDMAIGGKGFFGVTNGMDTYYTRAGSFGVNKDRY 120

Query: 114 LVSASGKYPVLDMA 127
           LV+  G Y +    
Sbjct: 121 LVTNQGNYVLGTQN 134



 Score = 66.4 bits (160), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 22/137 (16%), Positives = 45/137 (32%), Gaps = 10/137 (7%)

Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV--IATMGLYSVDMSQGF 169
           G   +A  K   +    V   I +     + G        G+V  +A + LY     QG 
Sbjct: 403 GVTSTAQAKSISIAQDGVREGILKDYYTNDSGNILAQFTNGQVRSVAKVALYHFQNEQGL 462

Query: 170 VRRENSGISPNIPPTPLEDLSGV--------TVKRGFLEDSNANSMYEMGQMIHLTQKFN 221
            +  ++  S +                     +    LE SN +    + ++I   + ++
Sbjct: 463 AKMGDNIYSQSANSGAAFFYKDAGGKSIYGAKIASNTLEQSNVDLAQALTEIIVTQKAYD 522

Query: 222 SITTLIDENEKSMLEAI 238
           +    I  + + +  AI
Sbjct: 523 ANAKSITTSNEMLQRAI 539


>gi|163758031|ref|ZP_02165119.1| flagellar hook protein E [Hoeflea phototrophica DFL-43]
 gi|162284320|gb|EDQ34603.1| flagellar hook protein E [Hoeflea phototrophica DFL-43]
          Length = 419

 Score = 85.7 bits (210), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 5/128 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M      G +   A   RL TVADNM+N +T G++    +FS ++    +        V 
Sbjct: 6   MMR---TGASGMNAQANRLGTVADNMANANTTGYKRASAEFSSLILP-GSAGSYNSGAVT 61

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119
           +   Y   + G+   T ++ D AL+G  +F +    G   LTR G F    +G LV+A+G
Sbjct: 62  TDVRYSISQAGALEFTSSKTDMALDGSGFFIVTDDNGLPFLTRAGSFVPDGEGFLVNAAG 121

Query: 120 KYPVLDMA 127
              +    
Sbjct: 122 FRLMGYNY 129



 Score = 72.6 bits (176), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 19/51 (37%)

Query: 189 LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            S   V  G LE SN +   E+  MI   + + + + +       M   + 
Sbjct: 366 GSFGKVVSGALESSNVDIAEELTDMIAAQRSYTANSKVFQTGSDLMEVLVN 416


>gi|206896319|ref|YP_002246665.1| flagellar hook protein FlgE [Coprothermobacter proteolyticus DSM
           5265]
 gi|206738936|gb|ACI18014.1| flagellar hook protein FlgE [Coprothermobacter proteolyticus DSM
           5265]
          Length = 221

 Score = 85.7 bits (210), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 37/243 (15%), Positives = 73/243 (30%), Gaps = 22/243 (9%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M   + I  A        L+  A N+SN +T  F+ ++   S          + + + V 
Sbjct: 1   MVELYGIARAGMRLSVGYLNVAAFNISNVNTEAFKALEPVESSGNAHEFPVANGRANIVD 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           +   +          + T         A+F +       LTR G F++  DG+ VS  G 
Sbjct: 61  NAYLFTVNRDNMGPLSNTSGYALTNPQAYFVITDGTNRWLTRKGNFELDRDGN-VSLQGF 119

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
           Y +    +V            + E          I                        +
Sbjct: 120 YVMNRDGAVAKATDLYSGNLLLVEADTSQYDRDSIG---------------------FVS 158

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
                + ++    +    LE SN +   EM ++I   + +          ++ +  +I  
Sbjct: 159 TGQERIINVDEAGLTANALEMSNVDLSAEMVKLIAAQRAYQFSAKAFRNADELIEASINL 218

Query: 241 IAS 243
             +
Sbjct: 219 RGA 221


>gi|327192294|gb|EGE59259.1| flagellar hook protein FlgE [Rhizobium etli CNPAF512]
          Length = 483

 Score = 85.7 bits (210), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 42/163 (25%), Positives = 69/163 (42%), Gaps = 2/163 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           S    ++   A   RLSTV+DN++N +TVG++ +   FS +V    +  +     V +  
Sbjct: 59  SMKTAVSGMSAQANRLSTVSDNIANANTVGYKAVSTSFSSLVLPSSSG-NYNSGGVQTSV 117

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGKYP 122
                E G    T +  D A+ GD +F +ES  G  +LTR G F V  DG+LV+++G   
Sbjct: 118 RQAISEQGDISYTTSAYDLAISGDGFFIVESADGTPVLTRAGDFSVDSDGNLVNSAGYTL 177

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +       +     +    +            IA+   Y    
Sbjct: 178 MGYSYDSGVPAVVVNGFDGLVPVNVAQSGLSAIASTSAYFSGN 220



 Score = 73.0 bits (177), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 27/73 (36%), Gaps = 1/73 (1%)

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
            G V   N      +   P  +    +++ G LE SN +   E+ +MI   + + + + +
Sbjct: 409 SGNVYTANGRSGVTVTGFPQTNG-LGSIQSGALESSNVDLAGELTEMIEAQRSYTANSKV 467

Query: 227 IDENEKSMLEAIR 239
                  M   + 
Sbjct: 468 FQTGSDIMDVLVN 480


>gi|330880522|gb|EGH14671.1| flagellar hook protein FlgE [Pseudomonas syringae pv. glycinea str.
           race 4]
          Length = 390

 Score = 85.7 bits (210), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 52/134 (38%), Gaps = 4/134 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA----IKNDIDQKISFV 59
           SFNIGL+   A  + L    +N++N  T GF++ + +F++             +      
Sbjct: 2   SFNIGLSGLYAANKSLDVTGNNIANVATTGFKSSRAEFADQYAQSIRGTSGQTNVGSGVT 61

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119
            +       +      T   LD A+ G+ +F L +    + TR G F    +G +V++ G
Sbjct: 62  TAAVSQQFSQGNLTTGTANSLDLAINGNGFFMLSNNGEKLYTRAGAFHTDKEGYVVNSGG 121

Query: 120 KYPVLDMASVPIQI 133
                        +
Sbjct: 122 MKLQGYNVDANGSV 135


>gi|239628984|ref|ZP_04672015.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239519130|gb|EEQ58996.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 541

 Score = 85.7 bits (210), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 14/132 (10%)

Query: 12  QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------KNDIDQKISFV 59
             A + +L  + +N++N +T GF++ + +F +V                  +  Q     
Sbjct: 1   MQAHQTKLDVIGNNIANVNTYGFKSSRARFQDVYYQTLQSATSGDNNRGGTNASQVGYGA 60

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVT-DDGSLVSA 117
                 L+ E  +  STG  +D A+ G+ +F  ++S   I  TR G  ++    G+LV A
Sbjct: 61  QLAGIDLNMERSALQSTGRPMDVAITGEGFFQVMDSDGNIFYTRAGNLQLDYKSGNLVDA 120

Query: 118 SGKYPVLDMASV 129
           +G   +      
Sbjct: 121 NGYTVLGVTGDP 132



 Score = 74.1 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/144 (17%), Positives = 43/144 (29%), Gaps = 11/144 (7%)

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           +RD             ++G    L  A V I      E  +             I  + L
Sbjct: 401 SRDLGLGSKAFTLTDGSAGGTVSLSDAGVTILANGIIEANHPNLG------KIQIGRIDL 454

Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIH 215
            + D   G     NS           +     +     +K   LE SN +   E   MI 
Sbjct: 455 VTFDNPYGLEGVGNSYFKATGNSGDAKACKAGEDGTGALKTSSLEMSNVDISTEFADMIV 514

Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239
             + F + + +I  ++  + E + 
Sbjct: 515 TQRGFQANSRIITVSDSILEELVN 538


>gi|27464952|gb|AAN63049.1| flagellar component FlgE [Vibrio vulnificus]
          Length = 434

 Score = 85.3 bits (209), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 76/207 (36%), Gaps = 13/207 (6%)

Query: 6   NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA--IKNDIDQKISFVASGK 63
            + L+   A +  L+T ++N++N +T GF+  + +F +V     + N        V + +
Sbjct: 3   YVSLSGLSAAQLDLNTTSNNIANANTYGFKESRAEFGDVYSNSLVTNAKTTPGGGVQANQ 62

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWF----ALESPRGIILTRDGRFKVTDDGSLVSASG 119
                  GS I T   +D  + G  +F        P    LTR+G F ++ D  +V+A+ 
Sbjct: 63  VAQQFHEGSSIYTNNPMDLRISGTGFFAVAKDRMVPNQNELTRNGAFHLSKDNYMVTAND 122

Query: 120 KYPVLDMASV------PIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRE 173
           +Y +              +    +     G+  + S     +      ++   Q F   +
Sbjct: 123 EYLLGYQVDPLSGDVASYEPQPLNIPAEFGKPKQTSNVTVGVNLPARGALKDPQAFDFED 182

Query: 174 NSGISPNIPPTPLE-DLSGVTVKRGFL 199
               + +   T  +       +   +L
Sbjct: 183 PDTYNRSTSSTIYDLMGQSYKLTTYYL 209



 Score = 69.5 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 21/145 (14%), Positives = 47/145 (32%), Gaps = 6/145 (4%)

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ-KGKVIATMG 159
           T+   F +       +        +  +    + + D   N    G  S  +   +  + 
Sbjct: 288 TQTIAFDLNSSTQFAAPFELTKFDEDGATTGFLTKVDIDENGSVYGTYSNGENVTLGRVA 347

Query: 160 LYSVDMSQGFVRRENSGISPNIP-----PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMI 214
           L  V   QG  ++  +  +                S  TV  G LE SN +   E+  +I
Sbjct: 348 LVRVPNEQGLDKKGGTQWNSTNNSGDKIWGESNKGSFGTVSSGALEQSNIDMTQELVDLI 407

Query: 215 HLTQKFNSITTLIDENEKSMLEAIR 239
              + F + +  ++ + +     ++
Sbjct: 408 SAQRNFQANSRALEVHNQLQQNILQ 432


>gi|171059412|ref|YP_001791761.1| hypothetical protein Lcho_2731 [Leptothrix cholodnii SP-6]
 gi|170776857|gb|ACB34996.1| protein of unknown function DUF1078 domain protein [Leptothrix
           cholodnii SP-6]
          Length = 501

 Score = 85.3 bits (209), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 31/134 (23%), Positives = 62/134 (46%), Gaps = 3/134 (2%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ--KISFVASG 62
           F  GL+   A  + L  + +N++N +T G +  + +F+++  +  N+I        V   
Sbjct: 3   FQQGLSGLNATSKNLEVIGNNVANANTYGTKASRAEFADMYASTINNIGTGNVGIGVQVA 62

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKY 121
                   GS  +T   LD A+ G  +F ++      + TR+G+FK+  +G +V+ SG+ 
Sbjct: 63  AVSQQFTQGSLSATDNPLDMAINGAGFFQVKDTAGNQLYTRNGQFKLDKEGFIVNNSGQK 122

Query: 122 PVLDMASVPIQIPQ 135
            +   A+    +  
Sbjct: 123 LLGYPANADGVVVP 136



 Score = 78.0 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 12/90 (13%), Positives = 29/90 (32%), Gaps = 5/90 (5%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSNANSMYE 209
              + + +    QG      +  +             +  +   ++ G LEDSN +   E
Sbjct: 410 AGQIEVANFRNPQGLQAVGGNAWASTFASGSATVGTPDSGNFGQLQSGSLEDSNVDLTAE 469

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +  MI   + + +    I   +  +   + 
Sbjct: 470 LVNMITAQRVYQANAQTIKTQDSVLQTLVN 499


>gi|307546968|ref|YP_003899447.1| flagellar hook protein FlgE [Halomonas elongata DSM 2581]
 gi|307218992|emb|CBV44262.1| flagellar hook protein FlgE [Halomonas elongata DSM 2581]
          Length = 422

 Score = 85.3 bits (209), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 16/129 (12%), Positives = 44/129 (34%), Gaps = 5/129 (3%)

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
           ++     + D  +    +    E      +   +++ +    + L S    +G     ++
Sbjct: 292 TSRASDLIQDGYTSGSLVGISIEDDGTIVRNYTNEQSRPAGQVSLASFRNPEGLDPVGDN 351

Query: 176 GISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
             +           +  T     ++ G +E SN +   E+  MI   + + + +  I   
Sbjct: 352 AWAATAASGQELVGAPGTGQLGGIQSGVVESSNVDMAQELVDMIVTQRAYQANSQTIKTQ 411

Query: 231 EKSMLEAIR 239
           ++ +  AI 
Sbjct: 412 DEVLQTAIN 420



 Score = 79.1 bits (193), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 70/185 (37%), Gaps = 5/185 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
            F+  L+   A    L  + +N++N+ TVGF+     F++V    K  +  K+S V    
Sbjct: 2   GFSQALSGLNAASSSLDVLGNNIANSQTVGFKGSDTLFADVYANSKVGLGTKVSRVL--- 58

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPV 123
                  G+  STG  LD  + G+ +   +    ++ +R+G+  +T DG L +A G   +
Sbjct: 59  --QDFGEGNLESTGRNLDLGISGEGFLRFQQNGEVVYSRNGQLSMTADGYLENAQGARLM 116

Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183
               +   Q+    +   +    E              ++D  +    + +         
Sbjct: 117 GFGVNDAGQVQTGGQPSVLQVSAEEMAASATTDVATTLNLDSREAVGEQLDQVDVTTDMS 176

Query: 184 TPLED 188
            P  +
Sbjct: 177 DPANN 181


>gi|229172400|ref|ZP_04299959.1| Flagellar hook protein FlgE [Bacillus cereus MM3]
 gi|228610871|gb|EEK68134.1| Flagellar hook protein FlgE [Bacillus cereus MM3]
          Length = 441

 Score = 85.3 bits (209), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 64/197 (32%), Gaps = 13/197 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49
           M  +    +    A +  LS  ++N++N  T G++  K  F +++               
Sbjct: 1   MIKALYTSITGMSATQNALSVTSNNIANAQTAGYKKQKAIFDDLLYNNTVGSRGDGSYAG 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF--ALESPRGIILTRDGRFK 107
            +     + +           GS   TG +++ A+EG+  F     +   +  TR G F 
Sbjct: 61  TNPKSIGNGLKFSGTATDFSDGSITLTGEKMETAIEGNGLFLVGDRNGGNVEYTRKGSFG 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           V+ D  + +  G+Y +        Q        +  +    +  G  +        ++S+
Sbjct: 121 VSADNFITATGGQYVLGYGVKPGTQEVDFSSQPSAIKLPVGTAIGGSVTDKATLGGNLSR 180

Query: 168 GFVRRENSGISPNIPPT 184
                       +    
Sbjct: 181 NQSDLSTDFTIYDDEGN 197



 Score = 73.7 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 20/144 (13%), Positives = 43/144 (29%), Gaps = 9/144 (6%)

Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
           G       G  ++A+         +    I     +      G +    KV+  + + + 
Sbjct: 302 GGLTNYPTGKTITATDVAGRPAAIANDYSISDGGFVMMRYSDGSM----KVVGQLAVATF 357

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
             S G ++  N                        V+ G  E SN +   E   ++   +
Sbjct: 358 PNSGGLMKSGNGNYIATPSSGIPAIGVAGENGAGNVRGGAKESSNVDLSVEFVDLMLYQR 417

Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242
            F     +I  +++ + E +  I 
Sbjct: 418 GFQGNAKVIKVSDEVLNEVVNLIR 441


>gi|302670255|ref|YP_003830215.1| flagellar hook protein FlgE2 [Butyrivibrio proteoclasticus B316]
 gi|302394728|gb|ADL33633.1| flagellar hook protein FlgE2 [Butyrivibrio proteoclasticus B316]
          Length = 572

 Score = 85.3 bits (209), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 49/138 (35%), Gaps = 18/138 (13%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  S    ++     +  +  + +N++N +T  +++    F +V+               
Sbjct: 1   MMRSLWSAVSGLQTHQLEMDVIGNNIANVNTTSYKSQATGFQDVLYQTIKTGTAGNGVKG 60

Query: 61  SGK-------------EYLSKEVGSFISTGTELDFALEGDAWFAL-----ESPRGIILTR 102
           S                    + GS  +T    D  + GD++F +        +    TR
Sbjct: 61  STSADQVGLGAKMGSININITKPGSAQTTYNPFDLMITGDSFFVVSESQNSPNQEKYFTR 120

Query: 103 DGRFKVTDDGSLVSASGK 120
           DG F +  +GSLV+ +  
Sbjct: 121 DGSFTIDAEGSLVTQNNG 138



 Score = 70.3 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 16/116 (13%), Positives = 40/116 (34%)

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                +     I I     I+     G+  +  +++      ++ + +       + ++ 
Sbjct: 450 NKGYPNGDMNGITISDNGSIYAKYSNGQDVKLAQIVVAEFNNAMGLEKAGDNVYKASLNS 509

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
             P        G  +  G LE SN +   E   MI   + F + + +I  +++ + 
Sbjct: 510 GEPIYMDITEDGGYMSSGVLEASNVDLAKEFTDMITTQRGFQANSRVITTSDELLQ 565


>gi|170703096|ref|ZP_02893916.1| flagellar basal body FlaE domain protein [Burkholderia ambifaria
           IOP40-10]
 gi|170131993|gb|EDT00501.1| flagellar basal body FlaE domain protein [Burkholderia ambifaria
           IOP40-10]
          Length = 413

 Score = 85.3 bits (209), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 62/189 (32%), Gaps = 2/189 (1%)

Query: 8   GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVASGKEY 65
           GL+        L  + +N++N +TVGF++   +FS++           Q           
Sbjct: 6   GLSGLAGASNALDVIGNNIANANTVGFKSSTAQFSDMYANSIATSVNTQIGIGTGLASVQ 65

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125
                G+  +T + LD A+ G+ +F + +      +RDG F+   +G +V + G+  +  
Sbjct: 66  QQFGQGTINTTNSSLDVAINGNGFFQMSNNGVTTYSRDGTFQRDKNGFIVDSQGRNLMGY 125

Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185
            A     I     +        I+       T             +   S          
Sbjct: 126 TAGSGGVINTAQTVPLQAPTTNIAPTATTKITGQFNLNSQDTVPTKTPFSATDSTTYNYS 185

Query: 186 LEDLSGVTV 194
                  ++
Sbjct: 186 TSIQVYDSL 194



 Score = 66.0 bits (159), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 12/125 (9%), Positives = 36/125 (28%), Gaps = 5/125 (4%)

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                D  +                    + +  V+  + L + +   G V    +  + 
Sbjct: 288 NNLAQDGYASGTLTTYSIGADGKLTGNYSNGQTAVLGQIALANFNNPNGLVNLGGNQYAE 347

Query: 180 NIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
           +      +  +  +     ++   LE+SN +   ++  +I   + + +    I   +   
Sbjct: 348 SSASGVPQISAPGSTNHGVLQGSALENSNVDLTSQLVNLITAQRNYQANAQTIKTQQTVD 407

Query: 235 LEAIR 239
              I 
Sbjct: 408 QTLIN 412


>gi|172061972|ref|YP_001809624.1| flagellar hook protein FlgE [Burkholderia ambifaria MC40-6]
 gi|171994489|gb|ACB65408.1| flagellar basal body FlaE domain protein [Burkholderia ambifaria
           MC40-6]
          Length = 413

 Score = 85.3 bits (209), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 62/189 (32%), Gaps = 2/189 (1%)

Query: 8   GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVASGKEY 65
           GL+        L  + +N++N +TVGF++   +FS++           Q           
Sbjct: 6   GLSGLAGASNALDVIGNNIANANTVGFKSSTAQFSDMYANSIATSVNTQIGIGTGLASVQ 65

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125
                G+  +T + LD A+ G+ +F + +      +RDG F+   +G +V + G+  +  
Sbjct: 66  QQFGQGTINTTNSSLDVAINGNGFFQMSNNGVTTYSRDGTFQRDKNGFIVDSQGRNLMGY 125

Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185
            A     I     +        I+       T             +   S          
Sbjct: 126 TAGSGGVINTAQTVPLQAPTTNIAPTATTKITGQFNLNSQDTVPTKTPFSATDSTTYNYS 185

Query: 186 LEDLSGVTV 194
                  ++
Sbjct: 186 TSIQVYDSL 194



 Score = 66.0 bits (159), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 12/125 (9%), Positives = 36/125 (28%), Gaps = 5/125 (4%)

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                D  +                    + +  V+  + L + +   G V    +  + 
Sbjct: 288 NNLAQDGYASGTLTTYSIGADGKLTGNYSNGQTAVLGQIALANFNNPNGLVNLGGNQYAE 347

Query: 180 NIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
           +      +  +  +     ++   LE+SN +   ++  +I   + + +    I   +   
Sbjct: 348 SSASGVPQISAPGSTNHGVLQGSALENSNVDLTSQLVNLITAQRNYQANAQTIKTQQTVD 407

Query: 235 LEAIR 239
              I 
Sbjct: 408 QTLIN 412


>gi|332525066|ref|ZP_08401246.1| flagellar basal body and hook protein [Rubrivivax benzoatilyticus
           JA2]
 gi|332108355|gb|EGJ09579.1| flagellar basal body and hook protein [Rubrivivax benzoatilyticus
           JA2]
          Length = 432

 Score = 85.3 bits (209), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 32/135 (23%), Positives = 57/135 (42%), Gaps = 3/135 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID--QKISFVAS 61
           SF  GL+   A  + L  + +N++N +T G +  + +FS++     N          V  
Sbjct: 2   SFQQGLSGLNATSKSLDVIGNNIANANTYGAKVSRAEFSDMYATALNGAGVNNVGIGVTL 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESP-RGIILTRDGRFKVTDDGSLVSASGK 120
           G        G+  +TG  +D A+ G  +F +       + TR+G+FKV  +G +V+    
Sbjct: 62  GAVSQQFTQGNISTTGNAMDMAINGAGFFQVTDGVSPTVYTRNGQFKVDREGYIVNNEKL 121

Query: 121 YPVLDMASVPIQIPQ 135
             +   A     I  
Sbjct: 122 KLMGYPADGTGTIQP 136



 Score = 77.2 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 33/98 (33%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLED 201
             + + K    + L +    QG      +  +              + +   ++ G LE+
Sbjct: 333 YSNGQSKPAGQLELANFRNPQGLQPLGGNVWASTYASGDAVVGVPSEGNMGVIQAGALEE 392

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E+  MI   + + +    I   ++ M   + 
Sbjct: 393 SNIDLTGELVNMITAQRIYQANAQTIKTQDQVMQTLVN 430


>gi|332558508|ref|ZP_08412830.1| FlgE [Rhodobacter sphaeroides WS8N]
 gi|12057218|gb|AAF14370.2|AF133240_4 flagellar hook protein FlgE [Rhodobacter sphaeroides]
 gi|332276220|gb|EGJ21535.1| FlgE [Rhodobacter sphaeroides WS8N]
          Length = 423

 Score = 85.3 bits (209), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 45/201 (22%), Positives = 79/201 (39%), Gaps = 10/201 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--ISFVAS 61
           S N  L+   A +  ++  + N++N  T+GFR  + +F++V  +    I +    S V +
Sbjct: 2   SINTALSGLSAAQHDIAATSHNIANVGTIGFRGSRAEFADVFNSSPYSISRTAVGSGVQT 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESP-------RGIILTRDGRFKVTDDGSL 114
            +  +    GS ++TG  LD A+EG  +FA E            I TR G F +  +G  
Sbjct: 62  LRTAMQFSQGSVVATGNTLDLAIEGQGFFATEPAVGPNSAKPEPIYTRAGAFGLNAEGVA 121

Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174
           ++ASG+  +    SV      +           ++    V  +    SVD+         
Sbjct: 122 INASGQKLLAWPVSVEGDALSQVPGSATPLTIPLTMGSPVGTSTVALSVDLPTDNAMLGR 181

Query: 175 SGISPNIPPT-PLEDLSGVTV 194
               P      P +  +   V
Sbjct: 182 QAAVPPAAAFDPADPTTYAAV 202



 Score = 76.1 bits (185), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 27/214 (12%), Positives = 64/214 (29%), Gaps = 13/214 (6%)

Query: 35  RTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDF--ALEGDAW-FA 91
           +   V+ +       N          + +  ++ E  +        D   AL G     +
Sbjct: 211 KGNAVEAAAYFIKTANPTAGNPQTDWAVRLVVAGEPLTPAQGDLTFDATGALSGGTGALS 270

Query: 92  LESPRGIILTRDGR-FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ 150
             +  G   T D    ++ D    V+   +      A   +++     ++     G    
Sbjct: 271 FTAASGNSYTLDLTETQLADRSFEVNTVSQDGKSASALTSLEVDASGTVWAAYGAGSPVA 330

Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNAN 205
            G+V+    L +    Q   +   SG +                    ++ G LE +N +
Sbjct: 331 MGQVV----LVTFANPQALRQLGASGFAATADSGQPVAGTAGDSGFGIIRAGALEHANVD 386

Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              E+  +I   + + +    ++ +   M   + 
Sbjct: 387 LTEELVHLITAQRNYQASAKAMETSNSLMQTIMN 420


>gi|300114799|ref|YP_003761374.1| fagellar hook-basal body protein [Nitrosococcus watsonii C-113]
 gi|299540736|gb|ADJ29053.1| fagellar hook-basal body protein [Nitrosococcus watsonii C-113]
          Length = 425

 Score = 85.3 bits (209), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 56/132 (42%), Gaps = 5/132 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG--AIKNDIDQKISFVAS 61
           +FN  L+   A    L   A N++N  T GF+  + +F+++    +         S V  
Sbjct: 2   AFNTSLSGLNAASSDLDVTAHNIANASTTGFKRSRSEFADIFAVSSFGRSQTAVGSGVLL 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWF---ALESPRGIILTRDGRFKVTDDGSLVSAS 118
            K     E G+   T   LD A+ G   F      + + ++ +R G F V  +G +V++S
Sbjct: 62  NKTAQQFEQGNLDFTQNSLDLAISGQGLFALSPSLNDKDLVYSRAGAFSVDKEGYVVNSS 121

Query: 119 GKYPVLDMASVP 130
           G+Y      +  
Sbjct: 122 GQYLRTFPTNEN 133



 Score = 76.4 bits (186), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 18/123 (14%), Positives = 35/123 (28%), Gaps = 5/123 (4%)

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
              D  +             V +    + +   +  + L      QG  +  N+     +
Sbjct: 301 LNQDGFTSGRLTGLDISKTGVIQANYSNGQNSTLGKVALAQFPNEQGLRQLGNNAWGETV 360

Query: 182 PPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                        S  T++ G LE SN +   E+  +I   + F +    I+        
Sbjct: 361 SSGSALAGEAGVGSFGTIQTGALESSNVDLTAELVHLITAQRNFQANAKAIETASTITDT 420

Query: 237 AIR 239
            I 
Sbjct: 421 IIN 423


>gi|302134834|ref|ZP_07260824.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tomato NCPPB
           1108]
          Length = 441

 Score = 85.3 bits (209), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 52/134 (38%), Gaps = 4/134 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA----IKNDIDQKISFV 59
           SFNIGL+   A  + L    +N++N  T GF++ + +F++             +      
Sbjct: 2   SFNIGLSGLYAANKSLDVTGNNIANVATTGFKSSRAEFADQYAQSIRGTSGQTNVGSGVS 61

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119
            +       +      T   LD A+ G+ +F L +    + TR G F    +G +V++ G
Sbjct: 62  TAAVSQQFSQGNLTTGTANSLDLAINGNGFFMLSNNGEKLYTRAGAFHTDKEGFVVNSGG 121

Query: 120 KYPVLDMASVPIQI 133
                        +
Sbjct: 122 MKLQGYNVDANGSV 135



 Score = 63.7 bits (153), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 18/123 (14%), Positives = 34/123 (27%), Gaps = 5/123 (4%)

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN- 180
              D  +         +          + K +VI    L +    QG  +   +      
Sbjct: 317 QDQDGYATGQLSAMSVDATGNLFATYTNGKSQVIGQTSLTNFANVQGLAQAGGTNWRETF 376

Query: 181 IPPTP----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
               P     E  +   +    LE+SN +   E+  +I     + +    I      M  
Sbjct: 377 ASGVPVSGVPESGTLGYITGQALEESNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQT 436

Query: 237 AIR 239
            I+
Sbjct: 437 TIQ 439


>gi|269103190|ref|ZP_06155887.1| flagellar hook protein FlgE [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268163088|gb|EEZ41584.1| flagellar hook protein FlgE [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 449

 Score = 85.3 bits (209), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 35/168 (20%), Positives = 66/168 (39%), Gaps = 6/168 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61
           S NI L+   A ++ L+T ++N++N +T GF+  + +F +V       N        V +
Sbjct: 2   SVNIALSGLGAAQKDLNTTSNNIANANTYGFKESRAEFGDVYSNSIFSNAKTSTGGGVQT 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALES----PRGIILTRDGRFKVTDDGSLVSA 117
                    GS + T   LD  + G  +FA+      P    LTR+G F + +   LV++
Sbjct: 62  STVAQQFHEGSSLYTNNPLDLRISGAGFFAVADNKAEPANNSLTRNGAFHLNNQNELVNS 121

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
            GK+ +    +         E  ++       +           ++  
Sbjct: 122 EGKFLLGYEVNSDTNTVSSYEPKSMKIDDVFGKPTPSKTMDISLNLPN 169



 Score = 66.4 bits (160), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 15/98 (15%), Positives = 36/98 (36%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP-----PTPLEDLSGVTVKRGFLED 201
             + K +++  + +  V   QG  +   +  +                S   +K G LE 
Sbjct: 350 YSNGKDRIVGRVAMARVSNEQGLSQLGGTLWNVTQESGDAVWGDASQGSFGAIKSGTLEQ 409

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E+  +I   + F + +  ++ N +     ++
Sbjct: 410 SNIDMTQELVDLITAQRNFQASSRALEVNNQLQQNILQ 447


>gi|222095377|ref|YP_002529437.1| flagellar hook protein flge [Bacillus cereus Q1]
 gi|221239435|gb|ACM12145.1| flagellar hook protein [Bacillus cereus Q1]
 gi|324325771|gb|ADY21031.1| flagellar hook protein FlgE [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 406

 Score = 85.3 bits (209), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 63/181 (34%), Gaps = 13/181 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49
           M  +    +    A +  LS  ++N++N  TVG++  K  F +++               
Sbjct: 1   MIKALYTSITGMNATQNALSVTSNNIANAQTVGYKKQKAMFDDLLYNNSIGAKGDGNYAG 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107
            +     + V           G+   TG +   A+EG+ +F         +  TR G F 
Sbjct: 61  TNPKSIGNGVKMSGTVTDYSDGTITLTGGKTQAAMEGNGFFVVGDSKGGNMEFTRKGTFG 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           ++ D  + +  G+Y     A+          I    +    +  G +  + G+   ++  
Sbjct: 121 ISSDYYITNTEGQYVFAYPANEATGEVDLSGIPGPLQIPMGTAIGGIRTSKGVVGGNIPA 180

Query: 168 G 168
            
Sbjct: 181 D 181



 Score = 61.0 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 10/93 (10%), Positives = 29/93 (31%), Gaps = 5/93 (5%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYE 209
              + +       G ++  N   +       L   +        ++    E +N +   E
Sbjct: 314 AGQLAVAMFPNEGGLMKTGNGNYTATNTTGILALGASGQNGAGKIRGAAQEGANVDLSVE 373

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
              ++   + F     +I  +++ + E +  I 
Sbjct: 374 FVDLMLYQRGFQGNAKVIKVSDEVLNEVVNLIR 406


>gi|304392493|ref|ZP_07374433.1| flagellar hook protein FlgE [Ahrensia sp. R2A130]
 gi|303295123|gb|EFL89483.1| flagellar hook protein FlgE [Ahrensia sp. R2A130]
          Length = 423

 Score = 85.3 bits (209), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 70/198 (35%), Gaps = 7/198 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---DIDQKIS 57
           M       ++   A   RLSTVADN++N DT G++    +F+++V    +   D      
Sbjct: 6   MMR---TSVSGMQAQSNRLSTVADNVANVDTTGYKKYSTEFAQLVRPGASSGVDSSLGSG 62

Query: 58  FVASGKEYLSKEVGSFISTGTELDFALEGDAWF-ALESPRGIILTRDGRFKVTDDGSLVS 116
            V +       + G+   T +  D A+ G+ +F   +S     LTR G F     G LV+
Sbjct: 63  GVLTDARQHISQQGNVSYTQSSTDIAINGNGFFVVEDSGGSNSLTRAGSFVADASGFLVN 122

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           A G+      A      P      +  E   + ++              +        +G
Sbjct: 123 AGGQRLKGVAADDQGNFPASIGSISALEPVSVDKQALAAVPTQNGRFVPNLPANSVAVTG 182

Query: 177 ISPNIPPTPLEDLSGVTV 194
            +P             ++
Sbjct: 183 DTPVDNSAASTFAHKTSL 200



 Score = 68.0 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/230 (13%), Positives = 61/230 (26%), Gaps = 19/230 (8%)

Query: 29  TDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA 88
             T   +T    +  +  A   DI    +   + +        +  + G     A  G +
Sbjct: 191 ASTFAHKTSLTAYDNLGDAKVIDIYSTPTGPLTWEMTAFDASTASPTGGFPYASAALGTS 250

Query: 89  W-------------------FALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASV 129
                               F + + R + L   G  ++  D S+V+A            
Sbjct: 251 TLTFDPANGQLAAGSPDTLTFTVPNGRPVDLALAGTTQLAADYSIVTADLDGAPPASMEG 310

Query: 130 PIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL 189
            +   +        +          +A +       S        +  S +I        
Sbjct: 311 IVVDGEGVLSARYSDGSLRDLYRIPLAAVVSPDRMDSDTGTVFLANTESGDIRVDFAGTG 370

Query: 190 SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           S   +  G LE SN     E+  MI   + + + + +       M   + 
Sbjct: 371 SNGVLISGALEQSNVELADELTDMIRAQRGYTANSKVFQTGADLMDVIVN 420


>gi|225375330|ref|ZP_03752551.1| hypothetical protein ROSEINA2194_00955 [Roseburia inulinivorans DSM
           16841]
 gi|225212819|gb|EEG95173.1| hypothetical protein ROSEINA2194_00955 [Roseburia inulinivorans DSM
           16841]
          Length = 550

 Score = 85.3 bits (209), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 55/145 (37%), Gaps = 18/145 (12%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  S    ++     + R+  + +N++N +TV F++  V FS+++    ++     +   
Sbjct: 1   MMRSMYSAVSGLKTHQTRMDVIGNNIANVNTVAFKSSSVTFSDILYQTTSNASGANATTG 60

Query: 61  S---------------GKEYLSKEVGSFISTGTELDFALEGD---AWFALESPRGIILTR 102
           +                 +      G+  +TG   D  L       +F + +    + TR
Sbjct: 61  TGGVNAKQIGLGTTAAATKVSITSAGASETTGNPFDIRLTDKNSTNFFIVNNGSENVFTR 120

Query: 103 DGRFKVTDDGSLVSASGKYPVLDMA 127
            G F V   G+L  +S  Y V+   
Sbjct: 121 SGSFYVDGSGNLCMSSTGYTVMGWQ 145



 Score = 73.7 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 22/156 (14%), Positives = 51/156 (32%), Gaps = 10/156 (6%)

Query: 90  FALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEIS 149
             ++  + +     G+  +  D   V  +        A   I I     I+   + G   
Sbjct: 396 ITVDFSQCLNYENGGKSTIGADAGAVDGTTGKGRKLGAMTGIFIDTSGRIYGTYDNGN-- 453

Query: 150 QKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE------DLSGVTVKRGFLEDSN 203
              +++  + +     + G  +   S     +     +         G ++  G LE SN
Sbjct: 454 --TELLGQIAVAQFSNASGLEKVGESCYRTTLNSGEFDGIGVEISADGSSMTTGELEMSN 511

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +   E   MI   + F + + +I  ++  + E + 
Sbjct: 512 VDLSSEFTSMITTQRGFQANSRVITTSDTLLEELVN 547


>gi|110632640|ref|YP_672848.1| flagellar hook protein FlgE [Mesorhizobium sp. BNC1]
 gi|110283624|gb|ABG61683.1| flagellar basal body FlaE [Chelativorans sp. BNC1]
          Length = 422

 Score = 85.3 bits (209), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 35/125 (28%), Positives = 53/125 (42%), Gaps = 2/125 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
               G++   A   RLSTVADN++N+ T G++    +FS +V             V S  
Sbjct: 6   MMKTGVSGMNAQANRLSTVADNIANSSTNGYKRATTEFSTLVVP-GTQGSYNSGGVTSTV 64

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASGKYP 122
                  G    T +  D A+ G  +F ++   G    TR G F +  DG LV++SG   
Sbjct: 65  RNAVSAQGVLQYTTSITDLAVNGSGFFIVQGSNGQPYLTRAGSFVLDGDGRLVNSSGYQL 124

Query: 123 VLDMA 127
           +    
Sbjct: 125 MGYSY 129



 Score = 74.1 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 13/125 (10%), Positives = 32/125 (25%), Gaps = 5/125 (4%)

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
               +D          +     +          K +  + L +V           +  + 
Sbjct: 295 YDAEVDGTPPTSIDSIEISAEGIVYAQYADGSFKPLYRIPLANVTSPDQLEVLSGNAFAE 354

Query: 180 NIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
                 +      +     +  G LE SN +   E+  MI   + + + + +       M
Sbjct: 355 TAASGAVRIGFAGSDGLGDIASGALESSNVDIAEELTSMIESQRSYTANSKVFQTGSDLM 414

Query: 235 LEAIR 239
              + 
Sbjct: 415 ELLVN 419


>gi|330818585|ref|YP_004362290.1| flagellar hook protein FlgE [Burkholderia gladioli BSR3]
 gi|327370978|gb|AEA62334.1| flagellar hook protein FlgE [Burkholderia gladioli BSR3]
          Length = 414

 Score = 85.3 bits (209), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 61/146 (41%), Gaps = 2/146 (1%)

Query: 8   GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG--KEY 65
           GL+        L  + +N++N +T GF+    +F+++     +        + +      
Sbjct: 6   GLSGLQGASNDLDVIGNNIANANTTGFKAATAQFTDMYANSVSSAVANGIGIGTQLAAVA 65

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125
              + G F +T   L+ A+ G+ +F + +      TRDG F    +G++V+A+G   +  
Sbjct: 66  QVFQQGGFTTTQNPLNMAINGNGFFQVTNNGVTTYTRDGTFNADKNGNIVNAAGAQLMGY 125

Query: 126 MASVPIQIPQKDEIFNVGEKGEISQK 151
             +    I     +     +G ++ K
Sbjct: 126 AVNANGVINTGALVPLTAPQGNLAPK 151



 Score = 58.7 bits (140), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 10/98 (10%), Positives = 27/98 (27%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFL-----ED 201
             + +   +  + + + +  QG      +           +     +   G L     E 
Sbjct: 316 YSNNQTLTLGQVVVVNFNNPQGLTSIGGNQYIQTSASGVPQVGVPGSTNHGTLKGSTTEA 375

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           S  +   E+  +I   + + +    I   +      I 
Sbjct: 376 STTDLTGELVNLITAQRDYQANAQTIKTQQAVDQTLIN 413


>gi|330953726|gb|EGH53986.1| flagellar basal body rod protein FlgG [Pseudomonas syringae Cit 7]
          Length = 113

 Score = 85.3 bits (209), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 46/111 (41%), Gaps = 13/111 (11%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +  +      A +  L+T+++N++N  T GF++ + +F +++  IK           
Sbjct: 1   MLPALYVAKTGLAAQDTNLTTISNNLANVSTTGFKSDRAEFQDLLYQIKRQPGAQSTQDS 60

Query: 54  ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98
                 Q  + V       +   GS  +T   LD A+ G  +F +  P G 
Sbjct: 61  ELPSGLQLGTGVRIVGTQKNFNAGSLQTTNNPLDLAVNGRGFFQVTQPDGT 111


>gi|330445348|ref|ZP_08309000.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328489539|dbj|GAA03497.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 467

 Score = 85.3 bits (209), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 38/168 (22%), Positives = 69/168 (41%), Gaps = 6/168 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61
           S NI L+   A ++ L+T ++N++N +T GF+  + +F +V  +    N        V +
Sbjct: 2   SMNIALSGLGAAQKDLNTTSNNIANANTFGFKESRAEFGDVYSSSIFSNAKTTTGGGVQT 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFAL----ESPRGIILTRDGRFKVTDDGSLVSA 117
                    GS I T   LD  + G  +FA+      P    LTR+G F + ++  LV++
Sbjct: 62  STVAQQFHEGSSIYTNNPLDLRVSGSGFFAVADNKNEPANNNLTRNGAFHLNNENELVNS 121

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
            GK+ +    +         E  ++       Q  K        ++  
Sbjct: 122 EGKFLLGYPVNKESNTVASYEAKSMKIDDIFGQPTKSNNIKVSLNLPN 169



 Score = 68.0 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 46/146 (31%), Gaps = 7/146 (4%)

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK--VIATM 158
           T+       D     SA       D+         K +I   G        GK  V+  +
Sbjct: 320 TQTLNMNYDDPTQYASAFEVRKFEDVDGATTGYLSKVDIDPEGNILASYSNGKDVVVGRV 379

Query: 159 GLYSVDMSQGFVRRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQM 213
            L  V   QG  +   +  +                S   +K G LE SN +   E+  +
Sbjct: 380 ALARVSNEQGLAQLGGTLWNTTQESGQAIWGDASQGSFGAIKSGTLEQSNIDMTQELVDL 439

Query: 214 IHLTQKFNSITTLIDENEKSMLEAIR 239
           I   + F + +  +D N +     ++
Sbjct: 440 ITAQRNFQASSRALDVNNQLQQNILQ 465


>gi|241113584|ref|YP_002973419.1| protein of unknown function DUF1078 domain protein [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240861792|gb|ACS59458.1| protein of unknown function DUF1078 domain protein [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 430

 Score = 85.3 bits (209), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 39/163 (23%), Positives = 67/163 (41%), Gaps = 2/163 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           S    ++   A   RLSTV+DN++N +T G++ +   FS +V    +  +     V +  
Sbjct: 6   SMKTAVSGMSAQANRLSTVSDNIANANTTGYKAVSTSFSSLVLPSSSG-NYNSGGVQTSV 64

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGKYP 122
                + G    T +  D A+ GD +F +ES  G  +LTR G F V  DG+LV+ +G   
Sbjct: 65  RQAISQQGDISYTTSAYDLAISGDGFFIVESADGTPVLTRAGDFSVDSDGNLVNGAGFTL 124

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +       +     +    +            +A+   Y    
Sbjct: 125 MGYSYDSGVPAVVVNGFDGLVPVNVSQSGLSAVASSSAYFSGN 167



 Score = 73.0 bits (177), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 27/73 (36%), Gaps = 1/73 (1%)

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
            G V   N      +   P  +    +++ G LE SN +   E+ +MI   + + + + +
Sbjct: 356 SGNVYSANGLSGVTVTGFPQTNG-LGSIQSGALESSNVDLAGELTEMIEAQRSYTANSKV 414

Query: 227 IDENEKSMLEAIR 239
                  M   + 
Sbjct: 415 FQTGSDIMDVLVN 427


>gi|221639495|ref|YP_002525757.1| Flagellar hook protein FlgE [Rhodobacter sphaeroides KD131]
 gi|221160276|gb|ACM01256.1| Flagellar hook protein FlgE [Rhodobacter sphaeroides KD131]
          Length = 423

 Score = 85.3 bits (209), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 45/201 (22%), Positives = 79/201 (39%), Gaps = 10/201 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--ISFVAS 61
           S N  L+   A +  ++  + N++N  T+GFR  + +F++V  +    I +    S V +
Sbjct: 2   SINTALSGLSAAQHDIAATSHNIANVGTIGFRGSRAEFADVFNSSPYSISRTAVGSGVQT 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESP-------RGIILTRDGRFKVTDDGSL 114
            +  +    GS ++TG  LD A+EG  +FA E            I TR G F +  +G  
Sbjct: 62  LRTAMQFSQGSVVATGNTLDLAIEGQGFFATEPAVGPNSAKPEPIYTRAGAFGLNAEGVA 121

Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174
           ++ASG+  +    SV      +           ++    V  +    SVD+         
Sbjct: 122 INASGQKLLAWPVSVEGDALSQVPGSATPLTIPLTMGSPVGTSTVALSVDLPTDDAMLGR 181

Query: 175 SGISPNIPPT-PLEDLSGVTV 194
               P      P +  +   V
Sbjct: 182 QAAVPPAAAFDPADPTTYAAV 202



 Score = 76.4 bits (186), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 27/214 (12%), Positives = 64/214 (29%), Gaps = 13/214 (6%)

Query: 35  RTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDF--ALEGDAW-FA 91
           +   V+ +       N          + +  ++ E  +        D   AL G     +
Sbjct: 211 KGNAVEAAAYFIKTANPTAGNPQTDWAVRLVVAGEPLTPAQGDLTFDATGALSGGTGALS 270

Query: 92  LESPRGIILTRDGR-FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ 150
             +  G   T D    ++ D    V+   +      A   +++     ++     G    
Sbjct: 271 FTAASGNSYTLDLTETQLADRSFEVNTVSQDGKSASALTSLEVDASGTVWAAYGAGSPVA 330

Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNAN 205
            G+V+    L +    Q   +   SG +                    ++ G LE +N +
Sbjct: 331 MGQVV----LVTFANPQALRQLGASGFAATADSGQPVAGTAGDSGFGIIRAGALEHANVD 386

Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              E+  +I   + + +    ++ +   M   + 
Sbjct: 387 LTEELVHLITAQRNYQASAKAMETSNSLMQTIMN 420


>gi|28869140|ref|NP_791759.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|213967582|ref|ZP_03395730.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tomato T1]
 gi|301385713|ref|ZP_07234131.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tomato Max13]
 gi|302060075|ref|ZP_07251616.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tomato K40]
 gi|28852380|gb|AAO55454.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|213927883|gb|EEB61430.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tomato T1]
 gi|331017026|gb|EGH97082.1| flagellar hook protein FlgE [Pseudomonas syringae pv. lachrymans
           str. M302278PT]
          Length = 441

 Score = 85.3 bits (209), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 52/134 (38%), Gaps = 4/134 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA----IKNDIDQKISFV 59
           SFNIGL+   A  + L    +N++N  T GF++ + +F++             +      
Sbjct: 2   SFNIGLSGLYAANKSLDVTGNNIANVATTGFKSSRAEFADQYAQSIRGTSGQTNVGSGVS 61

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119
            +       +      T   LD A+ G+ +F L +    + TR G F    +G +V++ G
Sbjct: 62  TAAVSQQFSQGNLTTGTANSLDLAINGNGFFMLSNNGEKLYTRAGAFHTDKEGFVVNSGG 121

Query: 120 KYPVLDMASVPIQI 133
                        +
Sbjct: 122 MKLQGYNVDANGSV 135



 Score = 63.7 bits (153), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 18/123 (14%), Positives = 34/123 (27%), Gaps = 5/123 (4%)

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN- 180
              D  +         +          + K +VI    L +    QG  +   +      
Sbjct: 317 QDQDGYATGQLSAMSVDATGNLFATYTNGKSQVIGQTSLTNFANVQGLAQAGGTNWRETF 376

Query: 181 IPPTP----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
               P     E  +   +    LE+SN +   E+  +I     + +    I      M  
Sbjct: 377 ASGVPVSGVPESGTLGYITGQALEESNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQT 436

Query: 237 AIR 239
            I+
Sbjct: 437 TIQ 439


>gi|206562843|ref|YP_002233606.1| flagellar hook protein FlgE [Burkholderia cenocepacia J2315]
 gi|198038883|emb|CAR54845.1| flagellar hook protein 2 FlgE2 [Burkholderia cenocepacia J2315]
          Length = 414

 Score = 84.9 bits (208), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 64/189 (33%), Gaps = 2/189 (1%)

Query: 8   GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVASGKEY 65
           GL+        L  + +N++N +TVGF+  +  F+++           Q           
Sbjct: 6   GLSGLAGASSNLDVIGNNIANANTVGFKQGRANFADMYANSVATSVNTQIGIGTRLASVQ 65

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125
            +   G+  ST + LD A+ G+ +F + S      +RDG F    +G++V A G+  +  
Sbjct: 66  QNFGQGTINSTKSSLDVAINGNGFFQMSSNGVTTYSRDGTFHRDKNGAIVDAQGRNLMGY 125

Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185
            A     I     +        I+ +     T         +   +   +          
Sbjct: 126 AAGAGGVINTAQTVPLQAPTNNIAPRATSKITGQFNLNAQDKVPAKTPFNATDNTTYNYN 185

Query: 186 LEDLSGVTV 194
                  T+
Sbjct: 186 SSIQVYDTL 194



 Score = 68.4 bits (165), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 13/98 (13%), Positives = 33/98 (33%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLED 201
             + +  V+  + L + +   G V    +  +        +       +  T++   LE+
Sbjct: 315 YSNGQSAVLGLIALANFNNPNGLVNIGGNQYAETAASGVPQIAAPGSTNHGTLQGSALEN 374

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN N   E+  +I   + + +    I   +      + 
Sbjct: 375 SNVNLTTELVNLITAQRNYQANAQTIKTQQAVDQTLLN 412


>gi|27363705|ref|NP_759233.1| flagellar hook protein FlgE [Vibrio vulnificus CMCP6]
 gi|37679147|ref|NP_933756.1| flagellar hook protein FlgE [Vibrio vulnificus YJ016]
 gi|320157109|ref|YP_004189488.1| flagellar hook protein FlgE [Vibrio vulnificus MO6-24/O]
 gi|27359821|gb|AAO08760.1| Flagellar hook protein flgE [Vibrio vulnificus CMCP6]
 gi|37197889|dbj|BAC93727.1| flagellar hook protein FlgE [Vibrio vulnificus YJ016]
 gi|319932421|gb|ADV87285.1| flagellar hook protein FlgE [Vibrio vulnificus MO6-24/O]
          Length = 434

 Score = 84.9 bits (208), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 72/207 (34%), Gaps = 13/207 (6%)

Query: 6   NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGK 63
            + L+   A +  L+T ++N++N +T GF+  + +F +V       N        V + +
Sbjct: 3   YVSLSGLSAAQLDLNTTSNNIANANTYGFKESRAEFGDVYSNSLFTNAKTTPGGGVQANQ 62

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWF----ALESPRGIILTRDGRFKVTDDGSLVSASG 119
                  GS I T   +D  + G  +F        P    LTR+G F ++ D  +V+A+ 
Sbjct: 63  VAQQFHEGSSIYTNNPMDLRISGTGFFAVAKDRMVPNQNELTRNGAFHLSKDNYMVTAND 122

Query: 120 KYPVLDMASV------PIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF-VRR 172
           +Y +              +    +     G+  + S     +      ++   Q F    
Sbjct: 123 EYLLGYQVDPLSGDVASYEPQPLNIPAEFGKPKQTSNVTVGVNLPASGALKDPQAFDFED 182

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFL 199
            ++                  +   +L
Sbjct: 183 PDTYNRSTSSTIYDSMGQSYKLTTYYL 209



 Score = 69.5 bits (168), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 21/145 (14%), Positives = 47/145 (32%), Gaps = 6/145 (4%)

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ-KGKVIATMG 159
           T+   F +       +        +  +    + + D   N    G  S  +   +  + 
Sbjct: 288 TQTIAFDLNSSTQFAAPFELTKFDEDGATTGFLTKVDIDENGSVYGTYSNGENVTLGRVA 347

Query: 160 LYSVDMSQGFVRRENSGISPNIP-----PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMI 214
           L  V   QG  ++  +  +                S  TV  G LE SN +   E+  +I
Sbjct: 348 LVRVPNEQGLDKKGGTQWNSTNNSGDKIWGESNKGSFGTVSSGALEQSNIDMTQELVDLI 407

Query: 215 HLTQKFNSITTLIDENEKSMLEAIR 239
              + F + +  ++ + +     ++
Sbjct: 408 SAQRNFQANSRALEVHNQLQQNILQ 432


>gi|254248705|ref|ZP_04942025.1| Flagellar hook protein FlgE [Burkholderia cenocepacia PC184]
 gi|124875206|gb|EAY65196.1| Flagellar hook protein FlgE [Burkholderia cenocepacia PC184]
          Length = 414

 Score = 84.9 bits (208), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 64/189 (33%), Gaps = 2/189 (1%)

Query: 8   GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVASGKEY 65
           GL+        L  + +N++N +TVGF+  +  F+++           Q           
Sbjct: 6   GLSGLAGASSNLDVIGNNIANANTVGFKQGRANFADMYANSVATSVNTQIGIGTRLASVQ 65

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125
            +   G+  ST + LD A+ G+ +F + S      +RDG F    +G++V A G+  +  
Sbjct: 66  QNFGQGTINSTKSSLDVAINGNGFFQMSSNGVTTYSRDGTFHRDKNGAIVDAQGRNLMGY 125

Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185
            A     I     +        I+ +     T         +   +   +          
Sbjct: 126 AAGAGGVINTAQTVPLQAPTSNIAPRATSRITGQFNLNAQDKVPAKTPFNATDNTTYNYN 185

Query: 186 LEDLSGVTV 194
                  T+
Sbjct: 186 SSIQVYDTL 194



 Score = 67.2 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 13/98 (13%), Positives = 33/98 (33%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLED 201
             + +  V+  + L + +   G V    +  +        +       +  T++   LE+
Sbjct: 315 YSNGQSAVLGLIALANFNNPNGLVNIGGNQYAETAASGVPQVSAPGSTNHGTLQGSALEN 374

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN N   E+  +I   + + +    I   +      + 
Sbjct: 375 SNVNLTTELVNLITAQRNYQANAQTIKTQQAVDQALLN 412


>gi|224825164|ref|ZP_03698270.1| flagellar basal body FlaE domain protein [Lutiella nitroferrum
           2002]
 gi|224602835|gb|EEG09012.1| flagellar basal body FlaE domain protein [Lutiella nitroferrum
           2002]
          Length = 419

 Score = 84.9 bits (208), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 36/132 (27%), Positives = 62/132 (46%), Gaps = 6/132 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID--QKISFVAS 61
            F  GL+   A  ++L  V +N++N  T GF+  + +F+++ G+    +   Q    V +
Sbjct: 2   GFQQGLSGLAAASKQLEVVGNNVANASTNGFKRSRSEFADMYGSSLYGVSNAQAGIGVRT 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESP----RGIILTRDGRFKVTDDGSLVSA 117
            +     + G+  STG  LD A+ G  +F L+SP         +R+G F+V  +G LV+ 
Sbjct: 62  AEVSQLFDQGNINSTGNNLDLAISGKGFFVLKSPSAASSQDAYSRNGAFQVDANGYLVNG 121

Query: 118 SGKYPVLDMASV 129
            G       A  
Sbjct: 122 DGYKLQGYAAQN 133



 Score = 70.7 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 17/126 (13%), Positives = 32/126 (25%), Gaps = 6/126 (4%)

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                D  +             + E    + K   I  + L +    QG      +    
Sbjct: 292 NSLSADGNAPGTLTSTNINNQGIIEATYSNGKTVAIGQVALANFTNVQGLQSMGGNLWKD 351

Query: 180 NIPPT------PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
               T               ++   LE SN +   E+  MI   + + +    I   +  
Sbjct: 352 VASSTGGAKVGAPMSADLGEIQSQALEQSNVDLNSELVDMIVAQRFYQANAQSIKTEDTI 411

Query: 234 MLEAIR 239
           +   I 
Sbjct: 412 LQTLIN 417


>gi|226944492|ref|YP_002799565.1| flagellar basal body rod protein [Azotobacter vinelandii DJ]
 gi|226719419|gb|ACO78590.1| Flagellar basal body rod protein [Azotobacter vinelandii DJ]
          Length = 383

 Score = 84.9 bits (208), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 65/129 (50%), Gaps = 5/129 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
            F+  L+   A    L+ V++N++N+ TVGF++   +F++V  + +  +  +++ V    
Sbjct: 2   GFSQALSGLNAASSNLNVVSNNIANSQTVGFKSSTTQFADVYASSRVGLGVQVAGV---- 57

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPV 123
              +   G+  +T   LD A+ G  +F  E    ++ +R+G+  +T +G L +A G   +
Sbjct: 58  -VQNFTSGNLETTDRSLDLAISGSGFFRFEQAGQVVYSRNGQLTLTPEGYLQNAQGARLL 116

Query: 124 LDMASVPIQ 132
               ++ I 
Sbjct: 117 GSNGAIQIP 125



 Score = 75.3 bits (183), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 22/221 (9%), Positives = 62/221 (28%), Gaps = 11/221 (4%)

Query: 30  DTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAW 89
           +T  +      F  +  + +  +    +         + +     S    L+F   G   
Sbjct: 160 NTYSYANTATVFDSLGNSHELTLYFTKTGTNEWAVNAALDGAVSASAAQALEFTTSGLLD 219

Query: 90  FALESPRGIILTR-DGRFKVTDDGSLVSASGKY-----PVLDMASVPIQIPQKDEIFNVG 143
               +     +T          D +  +  G          D  +    +    E     
Sbjct: 220 GYTPTSFDFAMTNGAADISFELDLTGSTQFGNDFEVSSLDQDGYTAGSLVGFTIEENGNV 279

Query: 144 EKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGF 198
                +++  V+  + L +    +G     ++                 +    +++ G 
Sbjct: 280 VGNYSNEQSLVVGQIQLATFRSPEGLQPVGDNAWVETAASGQPLVGTAGNGQFGSLESGV 339

Query: 199 LEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +E SN +   E+  +I   + F +    +    + + +A+ 
Sbjct: 340 VEASNVDLTKELVNLIIAQRNFQANAQSVSTQSEVLEQAVN 380


>gi|298487854|ref|ZP_07005894.1| Flagellar basal-body rod protein flgF [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|298157579|gb|EFH98659.1| Flagellar basal-body rod protein flgF [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
          Length = 258

 Score = 84.9 bits (208), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 67/185 (36%), Gaps = 3/185 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + ++            A+N++N  T GF     +   +   +  ++    ++  
Sbjct: 1   MDKLLYVAMSGASENAIAQKAHANNLANVSTNGFMRDLEQARSM--PVFGEVMPSRAYAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           S +       G+ + TG ELD A++GD W A+++P  G   TR     +   G L   SG
Sbjct: 59  SERPGTDFSAGAMVETGRELDIAVKGDGWIAVQTPDGGEAYTRSSGMNIDALGVLRDGSG 118

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
              + +   + +   Q+ EI   G     S          +  + + +  ++    G   
Sbjct: 119 LPVMGNGGPIAVPPQQQIEIGADGTISIRSLGESPQVMAQVDRIKLVKPDLKTMEKGPGW 178

Query: 180 NIPPT 184
             P  
Sbjct: 179 PDPHQ 183


>gi|329898288|ref|ZP_08272371.1| Flagellar basal-body rod protein flgF [gamma proteobacterium
           IMCC3088]
 gi|328920853|gb|EGG28296.1| Flagellar basal-body rod protein flgF [gamma proteobacterium
           IMCC3088]
          Length = 253

 Score = 84.9 bits (208), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 81/238 (34%), Gaps = 10/238 (4%)

Query: 6   NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65
              +A+   + Q  +   + ++N  TVGF+      +E V       +     VA+ +++
Sbjct: 5   YTAMASVKQVNQARAQTTNMLANVSTVGFKESYRHATESVKVASTAFETTYQPVAASEDF 64

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASGKYPVL 124
           +S   G   STG +LD  ++      ++ S   I  TR G  +V + G L   +G+  V 
Sbjct: 65  ISLRAGPMQSTGRKLDIFMQAQTVLGVQASNEQIAFTRRGDLRVNEIGQLELGTGQLVVD 124

Query: 125 DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENSGISPN 180
           D  S       +D                  A           D S   + R   G+   
Sbjct: 125 DAGSPISVPLGQDLEIGADGTVVAYDPELPEAPGAEVGRLMLRDASATVLARRLDGLFEP 184

Query: 181 I-----PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
                         +   +  G LE S+ N    + Q++   + F S   LI E    
Sbjct: 185 ATQAGSGGDFESGPTPPEILSGALEGSSVNVSEMLTQLLDYNRSFESRIRLIKEVRDL 242


>gi|253996319|ref|YP_003048383.1| flagellar hook protein FlgE [Methylotenera mobilis JLW8]
 gi|253982998|gb|ACT47856.1| flagellar basal body FlaE domain protein [Methylotenera mobilis
           JLW8]
          Length = 421

 Score = 84.9 bits (208), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 60/132 (45%), Gaps = 2/132 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG- 62
           SF  GL+   A  ++L  + +N+SN +TVGF+  + +F++V              + +  
Sbjct: 2   SFQQGLSGLNAASKQLEVIGNNVSNANTVGFKQSRAEFADVFANSITGGGGSQIGIGTNL 61

Query: 63  -KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
                    G+  +T   LD A+ G+ +F + S   +  TR+G+F++   G +V ++ K 
Sbjct: 62  ATVAQQFTQGNITATNNSLDIAINGNGFFRMSSGGAVTYTRNGQFQLDKQGFIVDSASKR 121

Query: 122 PVLDMASVPIQI 133
                A     I
Sbjct: 122 LTGYAADANGNI 133



 Score = 78.4 bits (191), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 64/216 (29%), Gaps = 11/216 (5%)

Query: 34  FRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE 93
           FR       ++     +      S  A+ +   +    S   T T     +    +  + 
Sbjct: 205 FRKTAANVWDI-YTTVDGAPIPASGAATAQMTFTGTGVSPTITPTAPATGIPSVTFTPMN 263

Query: 94  SPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-----EI 148
           +    +         T D S  +  G    ++  S       +   FN    G       
Sbjct: 264 TATTPVANGAANVTTTIDYSKSTQFGSAFSINALSQDGFTSGRLSGFNTASDGTIVGRYS 323

Query: 149 SQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSN 203
           + + K +  + L S     G      +  + +    P    +  +     ++   +EDSN
Sbjct: 324 NGQSKNLGRVVLSSFTNPNGLQSLGGNAWAVSASSGPALTGAPGSGLLGVLQSSAVEDSN 383

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +   E+  MI   + + +    I   ++ +   + 
Sbjct: 384 VDLTAELVNMITAQRVYQANAQTIKTQDQVLQTLVN 419


>gi|260901953|ref|ZP_05910348.1| flagellar hook protein FlgE [Vibrio parahaemolyticus AQ4037]
 gi|308106765|gb|EFO44305.1| flagellar hook protein FlgE [Vibrio parahaemolyticus AQ4037]
          Length = 437

 Score = 84.9 bits (208), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 72/200 (36%), Gaps = 7/200 (3%)

Query: 6   NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGK 63
            + L+   A +  L+T ++N++N +T GF+  + +F++V       N          + +
Sbjct: 3   YVSLSGLSAAQLDLNTTSNNIANANTYGFKESRAEFADVYSNSLFTNAKTTPGGGAQASQ 62

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWF----ALESPRGIILTRDGRFKVTDDGSLVSASG 119
                  GS I T   +D  + G  +F        P+   +TR+G F +  +  +V+A+ 
Sbjct: 63  VAQQFHEGSSIYTNNPMDLRVSGTGFFAVAKDRLIPQQNEMTRNGAFHLNKENYMVTAND 122

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV-RRENSGIS 178
           ++ +    +         E   +    E  +  +        ++  +       +     
Sbjct: 123 EFLLGYQVNPESGEVSSYEPQPINIPAEFGKPKQTANIEVGMNLPANGDLKDPTQFDFSD 182

Query: 179 PNIPPTPLEDLSGVTVKRGF 198
           P+            ++ + +
Sbjct: 183 PDTYNRSTSSTIYDSMGQSY 202



 Score = 65.7 bits (158), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 34/98 (34%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI-----PPTPLEDLSGVTVKRGFLED 201
             + +   +  + L  V   QG  ++  +                   S  T+  G LE 
Sbjct: 338 YSNGENVTLGRVALVRVPNEQGLDKKGGTQWDSTQFSGDKIWGESNKGSFGTINNGMLEQ 397

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E+  +I   + F + +  ++ + +     ++
Sbjct: 398 SNIDMTQELVDLISAQRNFQANSRSLEVHNQLQQNILQ 435


>gi|116248740|ref|YP_764581.1| flagellar hook protein FlgE [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115253390|emb|CAK11778.1| putative flagellar hook protein flgE [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 430

 Score = 84.9 bits (208), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 40/163 (24%), Positives = 67/163 (41%), Gaps = 2/163 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           S    ++   A   RLSTV+DN++N +T G++ +   FS +V    +  +     V +  
Sbjct: 6   SMKTAVSGMSAQANRLSTVSDNIANANTTGYKAVSTSFSSLVLPSSSG-NYNSGGVQTSV 64

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGKYP 122
                + G    T +  D A+ GD +F +ES  G  +LTR G F V  DG+LV+ +G   
Sbjct: 65  RQAISQQGDISYTTSAYDLAISGDGFFIVESADGTPVLTRAGDFSVDSDGNLVNGAGFTL 124

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +       +     +    +            IA+   Y    
Sbjct: 125 MGYSYDSGVPAVVVNGFDGLVPVNVSQSGLSAIASSSAYFSGN 167



 Score = 73.0 bits (177), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 27/73 (36%), Gaps = 1/73 (1%)

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
            G V   N      +   P  +    +++ G LE SN +   E+ +MI   + + + + +
Sbjct: 356 SGNVYSANGLSGVTVTGFPQTNG-LGSIQSGALESSNVDLAGELTEMIEAQRSYTANSKV 414

Query: 227 IDENEKSMLEAIR 239
                  M   + 
Sbjct: 415 FQTGSDIMDVLVN 427


>gi|312882659|ref|ZP_07742396.1| flagellar hook protein FlgE [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309369620|gb|EFP97135.1| flagellar hook protein FlgE [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 435

 Score = 84.9 bits (208), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 68/172 (39%), Gaps = 6/172 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61
           S  I L+   A +  L+T ++N++N +T GF+  + +F++V       +        V +
Sbjct: 2   SSYISLSGLSAAQLDLNTTSNNIANANTYGFKESRAEFADVYSNSIFTHAKTTPGQGVQA 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWF----ALESPRGIILTRDGRFKVTDDGSLVSA 117
            K       GS I T   +D  + G  +F       +P    LTR+G F +  D  +V++
Sbjct: 62  SKVAQQFHEGSSIYTNNPMDLRINGTGFFAVAKDRLTPTTNELTRNGAFHLNKDNYMVTS 121

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169
           + ++ +    +         E  ++    E  +  +        ++  +   
Sbjct: 122 NDEFLLGYQVNKDTGDVLSYEPSSIMIPKEFGKPKQTANIEVGVNLPANAPL 173



 Score = 66.4 bits (160), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 48/145 (33%), Gaps = 6/145 (4%)

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ-KGKVIATMG 159
           T+   F +       +        +  +    + + D   N    G  S  +  ++  + 
Sbjct: 289 TQTLSFGLDSATQFAAPFELTKFDEDGATTGFLTKVDFDENGSVLGTYSNGENVILGRVA 348

Query: 160 LYSVDMSQGFVRRENSGISPNI-----PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMI 214
           +  V   QG  ++  +                   S  T++ G LE +N +   E+  +I
Sbjct: 349 MVRVANEQGLDKKGGTQWDATQFSGDKIWGESNKGSFGTIRSGTLEQANIDMTQELVDLI 408

Query: 215 HLTQKFNSITTLIDENEKSMLEAIR 239
              + F + +  ++ +  +    ++
Sbjct: 409 QAQRNFQANSRALEVHNTTQQNILQ 433


>gi|89075495|ref|ZP_01161906.1| flagellar hook protein [Photobacterium sp. SKA34]
 gi|89048767|gb|EAR54338.1| flagellar hook protein [Photobacterium sp. SKA34]
          Length = 467

 Score = 84.9 bits (208), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 35/131 (26%), Positives = 61/131 (46%), Gaps = 6/131 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61
           S NI L+   A ++ L+T ++N++N +T GF+  + +F +V       N        V +
Sbjct: 2   SMNIALSGLGAAQKDLNTTSNNIANANTFGFKESRAEFGDVYSNSIFSNAKTTTGGGVQT 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFAL----ESPRGIILTRDGRFKVTDDGSLVSA 117
                    GS I T   LD  + G  +FA+      P    LTR+G F + ++  LV++
Sbjct: 62  STVAQQFHEGSSIYTNNPLDLRVSGSGFFAVADNKNEPANNNLTRNGAFHLNNENELVNS 121

Query: 118 SGKYPVLDMAS 128
            GK+ +    +
Sbjct: 122 EGKFLLGYPVN 132



 Score = 69.1 bits (167), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 47/146 (32%), Gaps = 7/146 (4%)

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK--VIATM 158
           T+       D     SA       D+         K +I   G        GK  V+  +
Sbjct: 320 TQSLTMNYDDPTQYASAFEVRKFQDVDGATTGYLSKVDIDPEGNILASYSNGKDIVVGRV 379

Query: 159 GLYSVDMSQGFVRRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQM 213
            L  V   QG  +   +  +                S  +VK G LE SN +   E+  +
Sbjct: 380 ALARVSNEQGLAQLGGTLWNTTQESGQAIWGDASQGSFGSVKSGTLEQSNIDMTQELVDL 439

Query: 214 IHLTQKFNSITTLIDENEKSMLEAIR 239
           I   + F + +  +D N +     ++
Sbjct: 440 ITAQRNFQASSRALDVNNQLQQNILQ 465


>gi|254456854|ref|ZP_05070282.1| conserved domain protein [Campylobacterales bacterium GD 1]
 gi|207085646|gb|EDZ62930.1| conserved domain protein [Campylobacterales bacterium GD 1]
          Length = 419

 Score = 84.9 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 56/132 (42%), Gaps = 7/132 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-------D 53
           M  +F  G++   + +  ++ + DN++N  TVGFR    +F+ +     N          
Sbjct: 2   MTQAFYTGISGLKSNQGGINIITDNLANISTVGFRGYNTEFASMFEDNLNTTSKNSATSS 61

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113
              + V      ++++ G    +    D A+ G+ WF ++  +  + TR G F    D  
Sbjct: 62  TIGAGVKLQAATMNRDQGVIQISDKSTDLAIVGNGWFGIQGEKDTMYTRGGNFTFDRDSD 121

Query: 114 LVSASGKYPVLD 125
           L++  G Y +  
Sbjct: 122 LITQDGFYVLGT 133



 Score = 64.9 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 12/93 (12%), Positives = 30/93 (32%), Gaps = 8/93 (8%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT--------VKRGFLEDSNANS 206
           +  + +Y     QG  R   +                 +        +    LE SN   
Sbjct: 324 VGKIAVYHFRNEQGLDRASGARFFEGKNSGSPLFYQDSSGENIIGTDILNFHLEGSNVQM 383

Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              +  +I   + +++ +  I   ++ M +A++
Sbjct: 384 TTGLTDLIIFQRAYDANSKSITTADQMMQKALQ 416


>gi|289627763|ref|ZP_06460717.1| flagellar hook protein FlgE [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289651647|ref|ZP_06482990.1| flagellar hook protein FlgE [Pseudomonas syringae pv. aesculi str.
           2250]
 gi|330866422|gb|EGH01131.1| flagellar hook protein FlgE [Pseudomonas syringae pv. aesculi str.
           0893_23]
          Length = 441

 Score = 84.9 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 52/134 (38%), Gaps = 4/134 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA----IKNDIDQKISFV 59
           SFNIGL+   A  + L    +N++N  T GF++ + +F++             +      
Sbjct: 2   SFNIGLSGLYAANKSLDVTGNNIANVATTGFKSSRAEFADQYAQSIRGTSGQTNVGSGVT 61

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119
            +       +      T   LD A+ G+ +F L +    + TR G F    +G +V++ G
Sbjct: 62  TAAVSQQFTQGNLTTGTANSLDLAINGNGFFMLSNNGEKLYTRAGAFHTDKEGYVVNSGG 121

Query: 120 KYPVLDMASVPIQI 133
                        +
Sbjct: 122 MKLQGYNVDANGSV 135



 Score = 63.0 bits (151), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 16/123 (13%), Positives = 33/123 (26%), Gaps = 5/123 (4%)

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
              D  +         +          + K +VI    L +    QG  +   +      
Sbjct: 317 QDQDGYATGQLSAMSVDATGNLFATYTNGKSQVIGQTSLTNFANVQGLAQAGGTNWRETF 376

Query: 182 PPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                     +  +   +    LE+SN +   E+  +I     + +    I      M  
Sbjct: 377 ASGVPVSGTPQSGTLGYITGQALEESNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQT 436

Query: 237 AIR 239
            I+
Sbjct: 437 TIQ 439


>gi|94267501|ref|ZP_01290900.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|93451978|gb|EAT02688.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
          Length = 1069

 Score = 84.9 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 67/199 (33%), Gaps = 10/199 (5%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA---IKNDIDQKISFV 59
           +S   G++    +   ++ + DN++N +T  +   +  F +V+           Q    V
Sbjct: 5   SSLYAGISGLSTMGNSMNVLGDNIANVNTTAYNASRATFQDVLSQSVATSAGSAQVGRGV 64

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALE---SPRGIILTRDGRFKVTDDGSLVS 116
                      GSF ST T  D A+ G+ +F +    S    + TR G F+    G+L++
Sbjct: 65  TLTTVDGLFAQGSFESTSTATDMAIGGEGFFMMRGSGSAEADMFTRAGEFRFDTQGNLIN 124

Query: 117 ASG----KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172
            +G     + V   +           I          +   ++        + ++  +  
Sbjct: 125 PAGHFIQGWQVDKDSGQIEGTIGDINIGRATPPVPTDRIDMIVNLDSRIPRETTEQRLYE 184

Query: 173 ENSGISPNIPPTPLEDLSG 191
             +G +           + 
Sbjct: 185 AWNGTNMTGVNPSPPIDAN 203



 Score = 83.4 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 25/209 (11%), Positives = 56/209 (26%), Gaps = 13/209 (6%)

Query: 36   TIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP 95
            +  + F   +    +D            E+      ++         A+ G A       
Sbjct: 866  SDDLDFESELSFQISDYSNPAVPPDPSYEFFGPVETNYH--------AIAGSAEEDGSRL 917

Query: 96   RGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI 155
                  R     +       S++  +   D  +         +   +      + +  + 
Sbjct: 918  GMTASRRFEAEAMATTQYANSSTTIFQDQDGFAAGFLQSVSVDTAGIITGNYSNGQVLMR 977

Query: 156  ATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEM 210
            A + L      QG  +   +                 T     +    LE SN +   E 
Sbjct: 978  AQVALADFANLQGLHKVGGNIFRATTQSGAPVTGQPGTNGLGEIAPNSLEQSNVDLGTEF 1037

Query: 211  GQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             +MI   + F + + +I   ++ + E I 
Sbjct: 1038 VKMITTQRGFQANSKMITTTDEMLNELIN 1066


>gi|86146155|ref|ZP_01064481.1| flagellar hook protein [Vibrio sp. MED222]
 gi|218708804|ref|YP_002416425.1| flagellar hook protein FlgE [Vibrio splendidus LGP32]
 gi|85836102|gb|EAQ54234.1| flagellar hook protein [Vibrio sp. MED222]
 gi|218321823|emb|CAV17792.1| Flagellar hook protein flgE [Vibrio splendidus LGP32]
          Length = 434

 Score = 84.9 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/207 (14%), Positives = 68/207 (32%), Gaps = 13/207 (6%)

Query: 6   NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGK 63
            + L+   A +  L+T ++N++N +T GF+  + +F +V  +    N          + +
Sbjct: 3   YVSLSGLSAAQLDLNTTSNNIANANTFGFKESRAEFGDVYSSSLFTNAKTTPGGGAQASQ 62

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWF----ALESPRGIILTRDGRFKVTDDGSLVSASG 119
                  GS I T   +D  + G  +F        P    LTR+G F +  D  +V+A+ 
Sbjct: 63  VAQQFHEGSSIYTNNPMDLRVSGTGFFAVSKDRMVPEINELTRNGAFHLNKDNYMVTAND 122

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF-------VRR 172
           ++ +                  +    E  +  +        ++  +           + 
Sbjct: 123 EFLLGYDVDPNSGEVLSYAPKPLDIPAEFGKPKQTENIEVGVNLPANGDLKDPATFDFKD 182

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFL 199
            ++                  +   +L
Sbjct: 183 PDTYNRATSSTVYDSMGQSYKLTTYYL 209



 Score = 68.7 bits (166), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 46/145 (31%), Gaps = 6/145 (4%)

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ-KGKVIATMG 159
           T+   F +       +        +  +    + + D        G  S  +  ++  +G
Sbjct: 288 TQVLNFGLDSSTQFAAPFELSRFDEDGATTGFLTKIDFDEYGSVLGSYSNGENVILGRVG 347

Query: 160 LYSVDMSQGFVRRENSGISPNIP-----PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMI 214
           L  V    G  ++  +                   S  ++  G LE SN +   E+  +I
Sbjct: 348 LVRVPNEHGLDKKGGTQWDSTNASGDKIWGESNKGSFGSINNGSLEQSNIDMTQELVDLI 407

Query: 215 HLTQKFNSITTLIDENEKSMLEAIR 239
              + F + +  ++ + +     ++
Sbjct: 408 SAQRNFQANSRSLEVHNQLQQNILQ 432


>gi|107026757|ref|YP_624268.1| flagellar hook protein FlgE [Burkholderia cenocepacia AU 1054]
 gi|116692051|ref|YP_837584.1| flagellar hook protein FlgE [Burkholderia cenocepacia HI2424]
 gi|105896131|gb|ABF79295.1| flagellar basal body FlaE [Burkholderia cenocepacia AU 1054]
 gi|116650051|gb|ABK10691.1| flagellar basal body FlaE domain protein [Burkholderia cenocepacia
           HI2424]
          Length = 414

 Score = 84.9 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 64/189 (33%), Gaps = 2/189 (1%)

Query: 8   GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVASGKEY 65
           GL+        L  + +N++N +TVGF+  +  F+++           Q           
Sbjct: 6   GLSGLAGASSNLDVIGNNIANANTVGFKQGRANFADMYANSVATSVNTQIGIGTRLASVQ 65

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125
            +   G+  ST + LD A+ G+ +F + S      +RDG F    +G++V A G+  +  
Sbjct: 66  QNFGQGTINSTKSSLDVAINGNGFFQMSSNGVTTYSRDGTFHRDKNGAIVDAQGRNLMGY 125

Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185
            A     I     +        I+ +     T         +   +   +          
Sbjct: 126 AAGAGGMINTAQTVPLQAPTSNIAPRATSKITGQFNLNAQDKVPAKTPFNATDNTTYNYN 185

Query: 186 LEDLSGVTV 194
                  T+
Sbjct: 186 SSIQVYDTL 194



 Score = 67.6 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 13/98 (13%), Positives = 33/98 (33%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLED 201
             + +  V+  + L + +   G V    +  +        +       +  T++   LE+
Sbjct: 315 YSNGQSAVLGLIALANFNNPNGLVNIGGNQYAETAASGVPQISAPGSTNHGTLQGSALEN 374

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN N   E+  +I   + + +    I   +      + 
Sbjct: 375 SNVNLTTELVNLITAQRNYQANAQTIKTQQAVDQTLLN 412


>gi|254698190|ref|ZP_05160018.1| flagellar hook protein FlgE [Brucella abortus bv. 2 str. 86/8/59]
 gi|260762637|ref|ZP_05874969.1| flagellar hook protein flgE [Brucella abortus bv. 2 str. 86/8/59]
 gi|260673058|gb|EEX59879.1| flagellar hook protein flgE [Brucella abortus bv. 2 str. 86/8/59]
          Length = 396

 Score = 84.9 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 5/123 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M      G++   A   RLSTVADN++N  TVG++  + +FS +V           S V 
Sbjct: 6   MMR---TGVSGMNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAGQYNSGS-VL 61

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASG 119
           +   Y   + G   ST +  D  ++G+ +F ++ P G    TR G F    +G LV+++G
Sbjct: 62  TDVRYGISDQGGIRSTSSTTDLTIDGNGYFVVQGPGGSTYLTRAGSFVPDKNGDLVNSAG 121

Query: 120 KYP 122
            Y 
Sbjct: 122 YYL 124



 Score = 67.2 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 22/54 (40%)

Query: 186 LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +      +  G LE+SNA+   E+  MI   + + + + +     + M   + 
Sbjct: 340 PQGDGMGKIMSGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGFELMDVLVN 393


>gi|86360902|ref|YP_472789.1| flagellar hook protein FlgE [Rhizobium etli CFN 42]
 gi|86285004|gb|ABC94062.1| flagellar hook protein [Rhizobium etli CFN 42]
          Length = 430

 Score = 84.9 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/163 (25%), Positives = 69/163 (42%), Gaps = 2/163 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           S    ++   A   RLSTV+DN++N +TVG++ +   FS +V    +  +     V +  
Sbjct: 6   SMKTAVSGMSAQANRLSTVSDNIANANTVGYKAVSTSFSSLVLPSSSG-NYNSGGVQTSV 64

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGKYP 122
                + G    T +  D A+ GD +F +ES  G  +LTR G F V  DG+LV+++G   
Sbjct: 65  RQAISQQGDISYTTSAYDLAISGDGFFIVESADGTPVLTRAGDFSVDSDGNLVNSAGYTL 124

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +       +     +    +            IA+   Y    
Sbjct: 125 MGYSYDSGVPAVVVNGFDGLVPVNVAQSGLSAIASTSAYFSGN 167



 Score = 72.6 bits (176), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 27/73 (36%), Gaps = 1/73 (1%)

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
            G V   N      +   P  +    +++ G LE SN +   E+ +MI   + + + + +
Sbjct: 356 SGNVYTANGMSGVTVTGFPQTNG-LGSIQSGALESSNVDLAGELTEMIEAQRSYTANSKV 414

Query: 227 IDENEKSMLEAIR 239
                  M   + 
Sbjct: 415 FQTGSDIMDVLVN 427


>gi|302185583|ref|ZP_07262256.1| flagellar hook protein FlgE [Pseudomonas syringae pv. syringae 642]
          Length = 445

 Score = 84.5 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 35/135 (25%), Positives = 58/135 (42%), Gaps = 4/135 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI---KNDIDQKISFVA 60
           SFNIGL+   A  + L    +N++N  T GF++ +++F++         +      S V 
Sbjct: 2   SFNIGLSGLYAANKSLDVTGNNIANVATTGFKSSRIEFADQYAQSIRGTSGGTSVGSGVT 61

Query: 61  SGKEYLSKEVGS-FISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119
           +         GS    TG  LD A+ G+ +F L +    + TR G F    DG +V++SG
Sbjct: 62  TAAVSQQFSQGSLTTGTGNSLDLAINGNGFFMLSNKGDSLYTRAGAFHTDKDGYVVNSSG 121

Query: 120 KYPVLDMASVPIQIP 134
                        + 
Sbjct: 122 MNLQGYNVDANGTVM 136



 Score = 62.6 bits (150), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 17/98 (17%), Positives = 30/98 (30%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLED 201
             + + KVI  + L S    QG      +                +  +   V    LE+
Sbjct: 346 YTNGQSKVIGQVSLTSFANVQGLAPAGGTNWRETFSSGIPGTGAPQSGTLGYVTGQALEE 405

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E+  +I     + +    I      M   I+
Sbjct: 406 SNVDLTLELVNLIKAQSNYQANAKTISTQSTIMQTTIQ 443


>gi|206558968|ref|YP_002229728.1| flagellar hook protein FlgE [Burkholderia cenocepacia J2315]
 gi|198035005|emb|CAR50877.1| flagellar hook protein 1 FlgE1 [Burkholderia cenocepacia J2315]
          Length = 413

 Score = 84.5 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 57/135 (42%), Gaps = 2/135 (1%)

Query: 8   GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVASGKEY 65
           GL+        L  + +N++N +TVGF++   +F+++           Q     +     
Sbjct: 6   GLSGLAGASNALDVIGNNIANANTVGFKSSTAQFADMYANSVATSVNTQIGIGTSLNSVQ 65

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125
                G+  +T + LD A+ G+ +F + +      +RDG F+   +G +V + G+  +  
Sbjct: 66  QQFGQGTINTTNSSLDVAINGNGFFQMSNNGVTTYSRDGTFQRDKNGFIVDSQGRNLMGY 125

Query: 126 MASVPIQIPQKDEIF 140
            A+    I     + 
Sbjct: 126 AANAGGVINTAQTVP 140



 Score = 66.0 bits (159), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 13/125 (10%), Positives = 36/125 (28%), Gaps = 5/125 (4%)

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                D  +                    + +  V+  + L + +   G V    +  + 
Sbjct: 288 NNLAQDGYASGTLTTYSIGADGKLTGNYSNGQTAVLGLIALANFNNPNGLVNLGGNQYAE 347

Query: 180 NIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
           +      +       +  T++   LE+SN +   ++  +I   + + +    I   +   
Sbjct: 348 SAASGVPQVSAPGSTNHGTLQGSALENSNVDLTSQLVNLITAQRNYQANAQTIKTQQTVD 407

Query: 235 LEAIR 239
              I 
Sbjct: 408 QTLIN 412


>gi|115353118|ref|YP_774957.1| flagellar hook protein FlgE [Burkholderia ambifaria AMMD]
 gi|115283106|gb|ABI88623.1| flagellar basal body FlaE domain protein [Burkholderia ambifaria
           AMMD]
          Length = 413

 Score = 84.5 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 65/189 (34%), Gaps = 2/189 (1%)

Query: 8   GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVASGKEY 65
           GL+        L  + +N++N +TVGF++   +FS++           Q     A     
Sbjct: 6   GLSGLAGASNALDVIGNNIANANTVGFKSSTAQFSDMYANSIATSVNTQIGIGTALSSVQ 65

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125
                G+  +T + LD A+ G+ +F + +      +RDG F+   +G +V+A G   +  
Sbjct: 66  QQFGQGTINTTNSSLDVAINGNGFFQMSNNGVTTYSRDGTFQRDKNGYIVNAQGLNLMGY 125

Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185
           +A     +     +        IS       T         +   +        +     
Sbjct: 126 LADKNGVVNTAQTVPLQAPTTNISPTATTKITGQFNLNSQDKVPTKTPFDATDTSTYNYS 185

Query: 186 LEDLSGVTV 194
                  ++
Sbjct: 186 TSVQVYDSL 194



 Score = 68.0 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 11/98 (11%), Positives = 33/98 (33%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLED 201
             + +  V+  + + + +   G V    +  +        +       +  T++   LE+
Sbjct: 315 YSNGQTAVLGQIAIANFNNPNGLVNLGGNQYAETAASGVPQISAPGSTNHGTLQGSALEN 374

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   ++  +I   + + +    I   +      I 
Sbjct: 375 SNVDLTSQLVNLITAQRNYQANAQTIKTQQTVDQTLIN 412


>gi|269138582|ref|YP_003295282.1| flagellar hook protein [Edwardsiella tarda EIB202]
 gi|267984242|gb|ACY84071.1| flagellar hook protein [Edwardsiella tarda EIB202]
 gi|304558592|gb|ADM41256.1| Flagellar hook protein FlgE [Edwardsiella tarda FL6-60]
          Length = 410

 Score = 84.5 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/134 (23%), Positives = 59/134 (44%), Gaps = 6/134 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
            F+  ++   A   +L  + +N++N+ TVGF++  V F+++         +    V    
Sbjct: 2   GFSQAISGMNAASSQLDVIGNNIANSQTVGFKSGSVTFADMFA-----GSKVGLGVTVAS 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122
                + G+  +T   LD A+ G  +F ++ P   +  TR+G+F     G L +A G Y 
Sbjct: 57  VNQDFKDGTTTTTNRGLDVAISGQGFFRMQDPNGSVYYTRNGQFSKDAKGFLTNAQGMYL 116

Query: 123 VLDMASVPIQIPQK 136
               A+      Q+
Sbjct: 117 TGYPAAGTPPTIQQ 130



 Score = 74.9 bits (182), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 19/142 (13%), Positives = 44/142 (30%), Gaps = 9/142 (6%)

Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162
            G  +       V++  +           QI     I       +    G+++    + +
Sbjct: 271 TGTRQQNTGKDGVTSKTQDGYKAGELTGYQINDDGTITGSYTNQQKQLLGQIV----MAN 326

Query: 163 VDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLT 217
               +G V   N+  S +         +  T     +  G +E SN +   ++  MI   
Sbjct: 327 FAAPEGLVSEGNNVWSESAKSGQPIVGTSGTSGLGSLTSGAVEASNVDLSKQLVDMIVAQ 386

Query: 218 QKFNSITTLIDENEKSMLEAIR 239
           + + S    I   ++ +   + 
Sbjct: 387 RNYQSNAQTIKTQDQILQTLVN 408


>gi|88799021|ref|ZP_01114602.1| Flagellar hook protein FlgE [Reinekea sp. MED297]
 gi|88778248|gb|EAR09442.1| Flagellar hook protein FlgE [Reinekea sp. MED297]
          Length = 1472

 Score = 84.5 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/193 (19%), Positives = 65/193 (33%), Gaps = 5/193 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI--SFVAS 61
           SF  GL+   A  + L    +N++N  T GF+  + +F +        + Q    S V  
Sbjct: 2   SFGSGLSGVAAANKDLKITGNNIANASTTGFKASRAEFGDAYTTSILGMGQDPIGSGVNV 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASGK 120
                  E G+   T + LD A++G+ +F  E P   +  TR G F +  DG +VS  G 
Sbjct: 62  NNVGQKFEQGNISQTNSVLDLAIDGNGFFVTEYPNNSVTYTRSGIFGIDKDGYIVSNQGA 121

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
                  +    +        V    +  +           +V      ++   S     
Sbjct: 122 TLQGFGVNENGIVSGILTDLRVDAGSQPPRGTH--GVEAQVNVPAGANVLQSIGSTTRTT 179

Query: 181 IPPTPLEDLSGVT 193
                +  +    
Sbjct: 180 GLAVGVAQVGPAQ 192



 Score = 62.6 bits (150), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 19/206 (9%), Positives = 49/206 (23%), Gaps = 9/206 (4%)

Query: 39   VKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98
             +F   +    +    + +              +  S G      +       +  P   
Sbjct: 1269 AEFK--LYFNADGTLDEENTGEWLISNWDPVDENGDSNGAYTSLNVAEGGSLPIPDPNTN 1326

Query: 99   ILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158
                      T  G   +          +     +   D+          + + +V+  +
Sbjct: 1327 SNFSVSFGGTTQYGGPFARYNFQQDGYASGRLKDLEIDDDGTIYARY--TNGEAQVLGQV 1384

Query: 159  GLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQM 213
             L S    +G      +    +            T     ++   LEDS  +   ++  +
Sbjct: 1385 ALASFANMEGLNPVGQTEWQESFESGDATIGEPGTGLLGTLQSAALEDSTVDLSEQLVHL 1444

Query: 214  IHLTQKFNSITTLIDENEKSMLEAIR 239
            I   + + +    I+         I 
Sbjct: 1445 IIAQRNYQASAKTIETANAVTQTIIN 1470


>gi|330986468|gb|EGH84571.1| flagellar hook protein FlgE [Pseudomonas syringae pv. lachrymans
           str. M301315]
          Length = 441

 Score = 84.5 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 52/134 (38%), Gaps = 4/134 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA----IKNDIDQKISFV 59
           SFNIGL+   A  + L    +N++N  T GF++ + +F++             +      
Sbjct: 2   SFNIGLSGLYAANKSLDVTGNNIANVATTGFKSSRAEFADQYAQSIRGTSGQTNVGSGVT 61

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119
            +       +      T   LD A+ G+ +F L +    + TR G F    +G +V++ G
Sbjct: 62  TAAVSQQFSQGNLTTGTANSLDLAINGNGFFMLSNNGEKLYTRAGAFHTDKEGYVVNSGG 121

Query: 120 KYPVLDMASVPIQI 133
                        +
Sbjct: 122 MKLQGYNVDANGSV 135



 Score = 63.0 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 16/123 (13%), Positives = 33/123 (26%), Gaps = 5/123 (4%)

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
              D  +         +          + K +VI    L +    QG  +   +      
Sbjct: 317 QDQDGYATGQLSAMSVDATGNLFATYTNGKSQVIGQTSLTNFANVQGLAQAGGTNWRETF 376

Query: 182 PPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                     +  +   +    LE+SN +   E+  +I     + +    I      M  
Sbjct: 377 ASGVPVSGTPQSGTLGYITGQALEESNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQT 436

Query: 237 AIR 239
            I+
Sbjct: 437 TIQ 439


>gi|170735956|ref|YP_001777216.1| flagellar basal body FlaE domain-containing protein [Burkholderia
           cenocepacia MC0-3]
 gi|169818144|gb|ACA92726.1| flagellar basal body FlaE domain protein [Burkholderia cenocepacia
           MC0-3]
          Length = 414

 Score = 84.5 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 64/189 (33%), Gaps = 2/189 (1%)

Query: 8   GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVASGKEY 65
           GL+        L  + +N++N +TVGF+  +  F+++           Q           
Sbjct: 6   GLSGLAGASSNLDVIGNNIANANTVGFKQGRANFADMYANSVATSVNTQIGIGTRLASVQ 65

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125
            +   G+  ST + LD A+ G+ +F + S      +RDG F    +G++V A G+  +  
Sbjct: 66  QNFGQGTINSTKSSLDVAINGNGFFQMSSNGVTTYSRDGTFHRDKNGAIVDAQGRNLMGY 125

Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185
            A     I     +        I+ +     T         +   +   +          
Sbjct: 126 AAGAGGVINTAQTVPLQAPTSNIAPRATSKITGQFNLNAQDKVPAKTPFNATDNTTYNYN 185

Query: 186 LEDLSGVTV 194
                  T+
Sbjct: 186 SSIQVYDTL 194



 Score = 68.0 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 13/98 (13%), Positives = 33/98 (33%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLED 201
             + +  V+  + L + +   G V    +  +        +       +  T++   LE+
Sbjct: 315 YSNGQSAVLGLIALANFNNPNGLVNIGGNQYAETAASGVPQISAPGSTNHGTLQGSALEN 374

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN N   E+  +I   + + +    I   +      + 
Sbjct: 375 SNVNLTTELVNLITAQRNYQANAQTIKTQQAVDQTLLN 412


>gi|330875983|gb|EGH10132.1| flagellar hook protein FlgE [Pseudomonas syringae pv. morsprunorum
           str. M302280PT]
          Length = 441

 Score = 84.5 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 53/134 (39%), Gaps = 4/134 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA----IKNDIDQKISFV 59
           SFNIGL+   A  + L    +N++N  T GF++ + +F++             +      
Sbjct: 2   SFNIGLSGLYAANKSLDVTGNNIANVATTGFKSSRAEFADQYAQSIRGTSGQTNVGSGVS 61

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119
            +       +      T   LD A+ G+ +F L +    + TR G F    +G +V+++G
Sbjct: 62  TAAVSQQFSQGNLTTGTANSLDLAINGNGFFMLSNNGEKLYTRAGAFHTDKEGFVVNSAG 121

Query: 120 KYPVLDMASVPIQI 133
                        +
Sbjct: 122 MKLQGYNVDANGSV 135



 Score = 64.5 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 16/123 (13%), Positives = 34/123 (27%), Gaps = 5/123 (4%)

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
              D  +         +          + K +VI    L +    QG  +   +      
Sbjct: 317 QDQDGYATGQLSAMSVDSTGNLFATYTNGKSQVIGQTSLTNFANVQGLAQAGGTNWRETF 376

Query: 182 PPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                     +  +  ++    LE+SN +   E+  +I     + +    I      M  
Sbjct: 377 ASGVPVSGTPQSGTLGSITGQALEESNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQT 436

Query: 237 AIR 239
            I+
Sbjct: 437 TIQ 439


>gi|291536012|emb|CBL09124.1| fagellar hook-basal body proteins [Roseburia intestinalis M50/1]
          Length = 551

 Score = 84.5 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 24/150 (16%), Positives = 54/150 (36%), Gaps = 19/150 (12%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  S    ++     + ++  + +N++N +TV F++  V F +V+  + ++     +   
Sbjct: 1   MMRSMYSAVSGLKTHQTKMDVIGNNIANVNTVAFKSSSVVFQDVLYQMTSNASGANAATG 60

Query: 61  S---------------GKEYLSKEVGSFISTGTELDFALEGD---AWFALESPRGIILTR 102
           +                        G+  +TG   D  L       +F + +    + TR
Sbjct: 61  TGGVNAKQIGLGVTTGATNLSITTSGAAETTGRAFDIRLSDQSTTNFFVVNNGSENLFTR 120

Query: 103 DGRFKVTDDGSLV-SASGKYPVLDMASVPI 131
            G F V   G+L  +++G   +        
Sbjct: 121 AGSFYVDGAGNLCMTSTGYTVMGWQVDPTT 150



 Score = 74.5 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 14/129 (10%), Positives = 40/129 (31%), Gaps = 6/129 (4%)

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           +           +   I    +   +      +   + +  + +     + G  +   + 
Sbjct: 420 SIDDGVTGKGKKLGAMIGISIDNNGLITGIYDNGNKETLGQIAVAQFANASGLEKVGENC 479

Query: 177 ISPNIPPTPLEDLSG------VTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
               +     + +         ++  G LE SN +   E  QMI   + F + + +I  +
Sbjct: 480 YRTTLNSGEFDGIGDEISADGSSMTSGELEMSNVDLSTEFTQMIITQRGFQANSRIITTS 539

Query: 231 EKSMLEAIR 239
           +  + E + 
Sbjct: 540 DTLLEELVN 548


>gi|320529456|ref|ZP_08030543.1| fagellar hook-basal body protein [Selenomonas artemidis F0399]
 gi|320138293|gb|EFW30188.1| fagellar hook-basal body protein [Selenomonas artemidis F0399]
          Length = 661

 Score = 84.5 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 12/121 (9%)

Query: 19  LSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLS----------- 67
           +  + +N++N +T GF+  +V F++++    +      + V                   
Sbjct: 1   MDVIGNNIANVNTTGFKASRVTFADMISQNLSGASSPGTTVGGTNPKQIGLGTSVSSVDL 60

Query: 68  -KEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDM 126
               G   STG   D AL G+  F ++       TR+G F+   DG+ V     + V   
Sbjct: 61  LFNDGVAQSTGKNTDVALSGNGTFVVKKGNETYYTRNGAFEFDADGNYVMPGSGHYVQGW 120

Query: 127 A 127
            
Sbjct: 121 M 121



 Score = 76.1 bits (185), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 23/143 (16%), Positives = 42/143 (29%), Gaps = 6/143 (4%)

Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG--KVIATMGL 160
           DG       G          V         +     I   G           +  A + +
Sbjct: 516 DGSITCNLAGLTQYVGNNTIVGTTNGHKKGVLTSVSIDQSGVITGTYDNNVRQAEAQIAV 575

Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLE----DLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
              + + G  +   S    +    P      +  GV++    LE SN N   +   MI  
Sbjct: 576 AQFNNATGLTKMGGSLYQESNNSGPANIKTANDLGVSMTPSALEMSNVNIADQFSDMIIT 635

Query: 217 TQKFNSITTLIDENEKSMLEAIR 239
            + F S + +I  +++ +   I 
Sbjct: 636 QRGFQSNSKIITVSDEMLETLIN 658


>gi|330889085|gb|EGH21746.1| flagellar hook protein FlgE [Pseudomonas syringae pv. mori str.
           301020]
          Length = 441

 Score = 84.5 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 52/134 (38%), Gaps = 4/134 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA----IKNDIDQKISFV 59
           SFNIGL+   A  + L    +N++N  T GF++ + +F++             +      
Sbjct: 2   SFNIGLSGLYAANKSLDVTGNNIANVATTGFKSSRAEFADQYAQSIRGTSGQTNVGSGVT 61

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119
            +       +      T   LD A+ G+ +F L +    + TR G F    +G +V++ G
Sbjct: 62  TAAVSQQFTQGNLTTGTANSLDLAINGNGFFMLSNNGEKLYTRAGAFHTDKEGYVVNSGG 121

Query: 120 KYPVLDMASVPIQI 133
                        +
Sbjct: 122 MKLQGYNVDANGSV 135



 Score = 62.6 bits (150), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 16/123 (13%), Positives = 33/123 (26%), Gaps = 5/123 (4%)

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
              D  +         +          + K +VI    L +    QG  +   +      
Sbjct: 317 QDQDGYATGQLSAMSVDATGNLFATYTNGKSQVIGQTSLTNFANVQGLAQAGGTNWRETF 376

Query: 182 PPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                     +  +   +    LE+SN +   E+  +I     + +    I      M  
Sbjct: 377 ASGVPVSGTPQSGTLGYITGQALEESNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQT 436

Query: 237 AIR 239
            I+
Sbjct: 437 TIQ 439


>gi|91225873|ref|ZP_01260842.1| flagellar hook protein E [Vibrio alginolyticus 12G01]
 gi|269965424|ref|ZP_06179543.1| flagellar hook protein [Vibrio alginolyticus 40B]
 gi|91189523|gb|EAS75799.1| flagellar hook protein E [Vibrio alginolyticus 12G01]
 gi|269829903|gb|EEZ84133.1| flagellar hook protein [Vibrio alginolyticus 40B]
          Length = 437

 Score = 84.5 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 72/200 (36%), Gaps = 7/200 (3%)

Query: 6   NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGK 63
            + L+   A +  L+T ++N++N +T GF+  + +F++V       N          + +
Sbjct: 3   YVSLSGLSAAQLDLNTTSNNIANANTYGFKESRAEFADVYSNSLFTNAKTTPGGGAQASQ 62

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWF----ALESPRGIILTRDGRFKVTDDGSLVSASG 119
                  GS I T   +D  + G  +F       +P+   LTR+G F +  +  +V+A+ 
Sbjct: 63  VAQQFHEGSSIYTNNPMDLRVSGTGFFAVAKERLTPQQNELTRNGAFHLNKENYMVTAND 122

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV-RRENSGIS 178
           ++ +              E   +    E  +  +        ++  +       +     
Sbjct: 123 EFLLGYQVDPSSGEVSSYEPQPINIPAEFGKPKQTANIEVGVNLPANGDLKDPTQFDFSD 182

Query: 179 PNIPPTPLEDLSGVTVKRGF 198
           P+            ++ + +
Sbjct: 183 PDTYNRSTSSTIYDSMGQSY 202



 Score = 66.0 bits (159), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 34/98 (34%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI-----PPTPLEDLSGVTVKRGFLED 201
             + +   +  + L  V   QG  ++  +                   S  T+  G LE 
Sbjct: 338 YSNGENVTLGRVALVRVPNEQGLDKKGGTQWDSTQFSGDKIWGESNKGSFGTINNGMLEQ 397

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E+  +I   + F + +  ++ + +     ++
Sbjct: 398 SNIDMTQELVDLISAQRNFQANSRSLEVHNQLQQNILQ 435


>gi|298487857|ref|ZP_07005897.1| Flagellar hook protein flgE [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|298157582|gb|EFH98662.1| Flagellar hook protein flgE [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
          Length = 441

 Score = 84.5 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 52/134 (38%), Gaps = 4/134 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA----IKNDIDQKISFV 59
           SFNIGL+   A  + L    +N++N  T GF++ + +F++             +      
Sbjct: 2   SFNIGLSGLYAANKSLDVTGNNIANVATTGFKSSRAEFADQYAQSIRGTSGQTNVGSGVT 61

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119
            +       +      T   LD A+ G+ +F L +    + TR G F    +G +V++ G
Sbjct: 62  TAAVSQQFSQGNLTTGTANSLDLAINGNGFFMLSNNGEKLYTRAGAFHTDKEGYVVNSGG 121

Query: 120 KYPVLDMASVPIQI 133
                        +
Sbjct: 122 MKLQGYNVDANGSV 135



 Score = 63.0 bits (151), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 16/123 (13%), Positives = 33/123 (26%), Gaps = 5/123 (4%)

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
              D  +         +          + K +VI    L +    QG  +   +      
Sbjct: 317 QDQDGYATGQLSAMSVDATGNLFATYTNGKSQVIGQTSLTNFANVQGLAQAGGTNWRETF 376

Query: 182 PPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                     +  +   +    LE+SN +   E+  +I     + +    I      M  
Sbjct: 377 ASGVPVSGTPQSGTLGYITGQALEESNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQT 436

Query: 237 AIR 239
            I+
Sbjct: 437 TIQ 439


>gi|71736953|ref|YP_275563.1| flagellar hook protein FlgE [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|257484949|ref|ZP_05638990.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tabaci ATCC
           11528]
 gi|71557506|gb|AAZ36717.1| flagellar hook protein FlgE [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|320325093|gb|EFW81162.1| flagellar hook protein FlgE [Pseudomonas syringae pv. glycinea str.
           B076]
 gi|320329352|gb|EFW85345.1| flagellar hook protein FlgE [Pseudomonas syringae pv. glycinea str.
           race 4]
 gi|331011042|gb|EGH91098.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 441

 Score = 84.5 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 52/134 (38%), Gaps = 4/134 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA----IKNDIDQKISFV 59
           SFNIGL+   A  + L    +N++N  T GF++ + +F++             +      
Sbjct: 2   SFNIGLSGLYAANKSLDVTGNNIANVATTGFKSSRAEFADQYAQSIRGTSGQTNVGSGVT 61

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119
            +       +      T   LD A+ G+ +F L +    + TR G F    +G +V++ G
Sbjct: 62  TAAVSQQFSQGNLTTGTANSLDLAINGNGFFMLSNNGEKLYTRAGAFHTDKEGYVVNSGG 121

Query: 120 KYPVLDMASVPIQI 133
                        +
Sbjct: 122 MKLQGYNVDANGSV 135



 Score = 63.0 bits (151), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 16/123 (13%), Positives = 33/123 (26%), Gaps = 5/123 (4%)

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
              D  +         +          + K +VI    L +    QG  +   +      
Sbjct: 317 QDQDGYATGQLSAMSVDATGNLFATYTNGKSQVIGQTSLTNFANVQGLAQAGGTNWRETF 376

Query: 182 PPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                     +  +   +    LE+SN +   E+  +I     + +    I      M  
Sbjct: 377 ASGVPVSGTPQSGTLGYITGQALEESNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQT 436

Query: 237 AIR 239
            I+
Sbjct: 437 TIQ 439


>gi|261856360|ref|YP_003263643.1| flagellar hook-basal body protein [Halothiobacillus neapolitanus
           c2]
 gi|261836829|gb|ACX96596.1| flagellar hook-basal body protein [Halothiobacillus neapolitanus
           c2]
          Length = 418

 Score = 84.5 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 67/198 (33%), Gaps = 5/198 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG--AIKNDIDQKISFVAS 61
           SFN  +    A ++ L   ++N++N ++ GF++ + +F ++    A  N        V +
Sbjct: 2   SFNTSITGLNAAQKDLDVTSNNIANANSTGFKSSRAQFGDIYAVSAYGNSKTATGQGVLT 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESP---RGIILTRDGRFKVTDDGSLVSAS 118
                    GS   T   LD A+ G  +F  +        + +R G      DG +V+ +
Sbjct: 62  EAVQQQFTQGSLQFTNNSLDLAISGQGFFTFQPTLDSLQSVYSRAGALGANKDGFIVNTN 121

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178
           G+Y      S    +           +  ++       T+   S ++         +   
Sbjct: 122 GQYLKALPVSANGTLQSTSLASAKPIQLPVAAGAPKATTLVTQSFNLPASATVPTVTPFD 181

Query: 179 PNIPPTPLEDLSGVTVKR 196
                      +    ++
Sbjct: 182 TTQATPDPASYTQANSQQ 199



 Score = 71.8 bits (174), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 35/98 (35%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLED 201
             + +   +  + L +    QG  +  N+  + ++           T     ++ G LE 
Sbjct: 319 YSNGQNIPLGMVALANFSNPQGLKQVGNNSWAESVDSGAPTAGQPGTGTFGLIQGGALEQ 378

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   ++  +I   + F +    I  ++ +    I 
Sbjct: 379 SNVDLTQQLVNLITAQRNFQANAQAIQTDKTATDSVIN 416


>gi|94264101|ref|ZP_01287900.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|93455517|gb|EAT05707.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
          Length = 1058

 Score = 84.5 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 66/199 (33%), Gaps = 10/199 (5%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA---IKNDIDQKISFV 59
           +S   G++    +   ++ + DN++N +T  F + +  F +V+         + Q    V
Sbjct: 5   SSLYAGISGLSTMGNSMNVLGDNIANVNTTAFNSSRATFQDVLSQSVATSAGVAQVGRGV 64

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALE---SPRGIILTRDGRFKVTDDGSLVS 116
                      GSF ST T  D A+ G+ +F +    S    + TR G F+    G+L S
Sbjct: 65  TLTTVDGLFAQGSFESTSTATDMAIGGEGFFMMRASGSAEADMFTRAGEFRFDTQGNLTS 124

Query: 117 ASG----KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172
            +G     + V               +          Q   ++           Q     
Sbjct: 125 PAGHFIQGWQVDSATGQSFGTIGDINLSRSTPPVRTEQVEMIVNLDSREQPASQQRLFDA 184

Query: 173 ENSGISPNIPPTPLEDLSG 191
            +      + PT   D + 
Sbjct: 185 WDGTNMAAVNPTAPIDDAN 203



 Score = 81.8 bits (200), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 48/166 (28%), Gaps = 6/166 (3%)

Query: 80   LDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEI 139
             DF     +     S RG +++R    +        ++S              +      
Sbjct: 890  TDFHAIAGSLEEDGSQRGTVVSRSFETEAMSTTQYANSSTTIYQDQDGFAAGFLQSVSVD 949

Query: 140  FNVGEKGEISQKGKVI-ATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT----- 193
                  G  S    ++ A + L      QG  +   +                 T     
Sbjct: 950  TGGIITGNYSNGQVLMQAQVALADFANLQGLHKVGGNIFRATTQSGAPVTGMPGTNGLGE 1009

Query: 194  VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +    LE SN +   E  +MI   + F + + +I   ++ + E I 
Sbjct: 1010 IAPNSLEQSNVDLGTEFVKMITTQRGFQANSKMITTTDEMLNELIN 1055


>gi|28897552|ref|NP_797157.1| flagellar hook protein FlgE [Vibrio parahaemolyticus RIMD 2210633]
 gi|153839685|ref|ZP_01992352.1| FlgE [Vibrio parahaemolyticus AQ3810]
 gi|260364611|ref|ZP_05777213.1| flagellar hook protein FlgE [Vibrio parahaemolyticus K5030]
 gi|260878284|ref|ZP_05890639.1| flagellar hook protein FlgE [Vibrio parahaemolyticus AN-5034]
 gi|260898114|ref|ZP_05906610.1| flagellar hook protein FlgE [Vibrio parahaemolyticus Peru-466]
 gi|5361008|gb|AAD42915.1|U12817_9 polar flagellar FlgE homolog [Vibrio parahaemolyticus]
 gi|28805764|dbj|BAC59041.1| polar flagellar FlgE [Vibrio parahaemolyticus RIMD 2210633]
 gi|149746795|gb|EDM57783.1| FlgE [Vibrio parahaemolyticus AQ3810]
 gi|308086119|gb|EFO35814.1| flagellar hook protein FlgE [Vibrio parahaemolyticus Peru-466]
 gi|308090147|gb|EFO39842.1| flagellar hook protein FlgE [Vibrio parahaemolyticus AN-5034]
 gi|308115102|gb|EFO52642.1| flagellar hook protein FlgE [Vibrio parahaemolyticus K5030]
 gi|328473453|gb|EGF44301.1| flagellar hook protein FlgE [Vibrio parahaemolyticus 10329]
          Length = 437

 Score = 84.5 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 72/200 (36%), Gaps = 7/200 (3%)

Query: 6   NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGK 63
            + L+   A +  L+T ++N++N +T GF+  + +F++V       N          + +
Sbjct: 3   YVSLSGLSAAQLDLNTTSNNIANANTYGFKESRAEFADVYSNSLFTNAKTTPGGGAQASQ 62

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWF----ALESPRGIILTRDGRFKVTDDGSLVSASG 119
                  GS I T   +D  + G  +F        P+   +TR+G F +  +  +V+A+ 
Sbjct: 63  VAQQFHEGSSIYTNNPMDLRVSGTGFFAVAKDRLIPQQNEMTRNGAFHLNKENYMVTAND 122

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV-RRENSGIS 178
           ++ +    +         E   +    E  +  +        ++  +       +     
Sbjct: 123 EFLLGYQVNPESGEVSSYEPQPINIPAEFGKPKQTANIEVGVNLPANGDLKDPTQFDFSD 182

Query: 179 PNIPPTPLEDLSGVTVKRGF 198
           P+            ++ + +
Sbjct: 183 PDTYNRSTSSTIYDSMGQSY 202



 Score = 65.7 bits (158), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 34/98 (34%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI-----PPTPLEDLSGVTVKRGFLED 201
             + +   +  + L  V   QG  ++  +                   S  T+  G LE 
Sbjct: 338 YSNGENVTLGRVALVRVPNEQGLDKKGGTQWDSTQFSGDKIWGESNKGSFGTINNGMLEQ 397

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E+  +I   + F + +  ++ + +     ++
Sbjct: 398 SNIDMTQELVDLISAQRNFQANSRSLEVHNQLQQNILQ 435


>gi|83718065|ref|YP_438389.1| flagellar hook protein flgE [Burkholderia thailandensis E264]
 gi|167614837|ref|ZP_02383472.1| flagellar hook protein flgE [Burkholderia thailandensis Bt4]
 gi|257141422|ref|ZP_05589684.1| flagellar hook protein flgE [Burkholderia thailandensis E264]
 gi|83651890|gb|ABC35954.1| flagellar hook protein flgE [Burkholderia thailandensis E264]
          Length = 395

 Score = 84.5 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 71/197 (36%), Gaps = 7/197 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SFNI L+   A+  +L+T++ N++N +T GF+  +  F+ +V   + +     S   S  
Sbjct: 2   SFNIALSGINAINSQLNTISHNIANANTYGFKAGRANFATMVAGTQANGTYIGSITQSVG 61

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLVSASGKYP 122
                     + TG  LD A++G+ +F  +   G +  TR G F+   DG +V   G+  
Sbjct: 62  TRGGF-----LPTGRALDGAIDGNGFFVTKDSDGSMLFTRFGYFQRDADGYIVDGFGRRA 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
                       +        +  +  +    ++     +          + S       
Sbjct: 117 QGYGTGGAYGDIRVPTDTEPAKASDSLEYVGNLSADWD-APKNPTFDKDDDTSFNHSVAS 175

Query: 183 PTPLEDLSGVTVKRGFL 199
                      V + F+
Sbjct: 176 TVYDSLGRQHIVTQYFV 192



 Score = 73.7 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 12/92 (13%), Positives = 33/92 (35%), Gaps = 5/92 (5%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYE 209
           + ++ L +     G     ++    +              +   V  G LE SNA+   E
Sbjct: 304 VGSLALATFANQDGLTAVGDTAWRASAASGNPLIGSAGSGALGKVVAGSLELSNADVTKE 363

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           +  M+   + + + + ++    + M   ++ +
Sbjct: 364 LVDMMSAQRNYQANSKVLSTENQMMQALMQAL 395


>gi|78067837|ref|YP_370606.1| flagellar hook protein FlgE [Burkholderia sp. 383]
 gi|77968582|gb|ABB09962.1| conserved hypothetical protein [Burkholderia sp. 383]
          Length = 413

 Score = 84.5 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 66/189 (34%), Gaps = 2/189 (1%)

Query: 8   GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGKEY 65
           GL+        L  + +N++N +TVGF++   +F+++       +   Q     +     
Sbjct: 6   GLSGLAGASNALDVIGNNIANANTVGFKSSTAQFADMYANSVATSTNTQIGIGTSLNAVQ 65

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125
            +   G+  +T + LD A+ G+ +F + +      +RDG F+   +G +V + G+  +  
Sbjct: 66  QNFGQGTINTTSSSLDVAINGNGFFQMSNNGVTTYSRDGTFQRDKNGFIVDSQGRNLMGY 125

Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185
            A+    I     +        I+       +             +   S          
Sbjct: 126 AANAGGVINTAQTVPLQAPTTNIAPTATTKISAQFNLNSQDTTPTKTPFSATDNTTYNYS 185

Query: 186 LEDLSGVTV 194
                  ++
Sbjct: 186 TSIQVYDSL 194



 Score = 65.3 bits (157), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 12/125 (9%), Positives = 35/125 (28%), Gaps = 5/125 (4%)

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                D  +                    + +  V+  + L + +   G V    +  + 
Sbjct: 288 NNLAQDGYASGTLTTYTIGADGKLTGNYSNGQTAVLGEIALANFNNPNGLVNLGGNQYAE 347

Query: 180 NIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
           +      +       +   ++   LE+SN +   ++  +I   + + +    I   +   
Sbjct: 348 SAASGVPQISAPGSTNHGKLQGSALENSNVDLTSQLVNLITAQRNYQANAQTIKTQQAVD 407

Query: 235 LEAIR 239
              I 
Sbjct: 408 QTIIN 412


>gi|77165838|ref|YP_344363.1| hypothetical protein Noc_2375 [Nitrosococcus oceani ATCC 19707]
 gi|254433154|ref|ZP_05046662.1| conserved domain protein [Nitrosococcus oceani AFC27]
 gi|76884152|gb|ABA58833.1| conserved hypothetical protein [Nitrosococcus oceani ATCC 19707]
 gi|207089487|gb|EDZ66758.1| conserved domain protein [Nitrosococcus oceani AFC27]
          Length = 425

 Score = 84.1 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 56/132 (42%), Gaps = 5/132 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG--AIKNDIDQKISFVAS 61
           +FN  L+   A    L   A+N++N  T GF+  + +F+++    +         S V  
Sbjct: 2   AFNTSLSGLNAASSDLDITANNIANASTTGFKRSRGEFADIFAVSSFGRSQTAVGSGVLL 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWF---ALESPRGIILTRDGRFKVTDDGSLVSAS 118
            K     E G+   T   LD A+ G   F      +   ++ +R G F V  +G +V++S
Sbjct: 62  NKTAQQFEQGNLDFTQNSLDLAISGRGLFALSPSLNSDDLVYSRAGAFSVDKEGYVVNSS 121

Query: 119 GKYPVLDMASVP 130
           G+Y      +  
Sbjct: 122 GQYLRTFPTNAN 133



 Score = 75.3 bits (183), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 15/123 (12%), Positives = 34/123 (27%), Gaps = 5/123 (4%)

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
              D  +             + +    + +   +  + L      QG  +  N+  +  +
Sbjct: 301 LNQDGFTSGRLTGLDISNTGIIQANYSNGQNSTLGKIALAQFPNEQGLRQLGNNAWAETV 360

Query: 182 PPTPLEDLS-----GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                            ++ G LE SN +   E+  +I   + F +    I+        
Sbjct: 361 SSGTALAGEAGVGSFGLIQTGALESSNVDLTAELVHLITAQRNFQANAKAIETASTVTDT 420

Query: 237 AIR 239
            I 
Sbjct: 421 IIN 423


>gi|167585194|ref|ZP_02377582.1| flagellar hook protein FlgE [Burkholderia ubonensis Bu]
          Length = 269

 Score = 84.1 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 56/129 (43%), Gaps = 2/129 (1%)

Query: 8   GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVASGKEY 65
           GL+        L  + +N++N +TVGF++   +F+++           Q           
Sbjct: 6   GLSGLSGASNALDVIGNNIANANTVGFKSSTAQFADMYANSVATSVNTQIGIGTRISSVQ 65

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125
            S   G+  +T   LD A+ G+ +F + +   +  +RDG F+   +G +V + G+  +  
Sbjct: 66  QSFGQGTINTTNNALDVAINGNGFFQMSNNGVVTYSRDGTFQRDKNGFIVDSQGRNLMGY 125

Query: 126 MASVPIQIP 134
            A+    I 
Sbjct: 126 NATAGGVIN 134


>gi|330961196|gb|EGH61456.1| flagellar hook protein FlgE [Pseudomonas syringae pv. maculicola
           str. ES4326]
          Length = 442

 Score = 84.1 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/134 (23%), Positives = 55/134 (41%), Gaps = 4/134 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS----FV 59
           SFNIGL+   A  + L    +N++N  T GF++ + +F++           K S     +
Sbjct: 2   SFNIGLSGLYAANKSLDVTGNNIANVATTGFKSSRTEFADQYAQSIRGTSGKSSVGSGVM 61

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119
            +       +      T   LD A+ GD +F L +    + TR G F    +G +V+++G
Sbjct: 62  TAAVSQQFSQGSLTTGTANSLDLAINGDGFFMLSNNGEKLYTRAGAFHTDKEGFVVNSTG 121

Query: 120 KYPVLDMASVPIQI 133
                        +
Sbjct: 122 MKLQGYNVDANGDV 135



 Score = 64.1 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 15/98 (15%), Positives = 29/98 (29%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLED 201
             + + K I    L S    QG  +   +                +  +   +    LE+
Sbjct: 343 YTNGQSKTIGQTSLTSFANVQGLAQAGGTNWRETFDSGVPVSGAPQSGTLGYITGQALEE 402

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E+  +I     + +    I      M   I+
Sbjct: 403 SNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQTTIQ 440


>gi|323495377|ref|ZP_08100454.1| flagellar hook protein FlgE [Vibrio brasiliensis LMG 20546]
 gi|323310300|gb|EGA63487.1| flagellar hook protein FlgE [Vibrio brasiliensis LMG 20546]
          Length = 434

 Score = 84.1 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 57/129 (44%), Gaps = 6/129 (4%)

Query: 6   NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGK 63
            + L+   A +  L+T ++N++N +T GF+  + +F +V       +        V + K
Sbjct: 3   YVALSGLSAAQLDLNTTSNNIANANTFGFKESRAEFGDVYSNSLFTHAKTTPGQGVQAAK 62

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWF----ALESPRGIILTRDGRFKVTDDGSLVSASG 119
                  GS I T   +D  + G  +F       SP    LTR+G F +  D  +V+A+ 
Sbjct: 63  VAQQFHEGSSIYTNNPMDLRISGTGFFAVAKDRLSPTTNELTRNGAFHLNKDNYMVTAND 122

Query: 120 KYPVLDMAS 128
           ++ +    +
Sbjct: 123 EFLLGYQVN 131



 Score = 67.6 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 36/98 (36%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI-----PPTPLEDLSGVTVKRGFLED 201
             + +  ++  + L  V   QG  ++  +                   S  T+  G LE 
Sbjct: 335 YSNGENIILGRVSLVRVANEQGLDKKGGTQWDSTQFSGDKIWGESNKGSFGTISSGTLEQ 394

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E+  +I   + F + +  ++ + ++    ++
Sbjct: 395 SNIDMTQELVDLISAQRNFQANSRSLEVHNQTQQNILQ 432


>gi|288940409|ref|YP_003442649.1| fagellar hook-basal body protein [Allochromatium vinosum DSM 180]
 gi|288895781|gb|ADC61617.1| fagellar hook-basal body protein [Allochromatium vinosum DSM 180]
          Length = 436

 Score = 84.1 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 12/98 (12%), Positives = 34/98 (34%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLED 201
             + K  V+  + + +    QG  +  ++    +                 +++   LE+
Sbjct: 337 YSNGKSYVLGQVAMANFKNPQGLQQLGDNNWGESYNSGEPIYAAAGDGRLGSIQSCALEN 396

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E+  MI   + + +    I  +++     + 
Sbjct: 397 SNVDLSQELVNMITAQRNYEANAKTISTSDQMTQTILN 434



 Score = 82.6 bits (202), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 65/132 (49%), Gaps = 4/132 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND-IDQKISFVASG 62
           SF+IGL+   A  + L    +N++N+ T+GF+  + +F+++  +     +++    V   
Sbjct: 2   SFSIGLSGLQAAAKDLEVTGNNVANSGTIGFKKSRAEFADIYASSFYTCVNKSAVGVRLD 61

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI---ILTRDGRFKVTDDGSLVSASG 119
                   G+   T   LD A+ G+ +F L S  G    + TR+G F+V  DG +V++SG
Sbjct: 62  AVTQQFSQGNVELTDNTLDLAINGEGFFVLNSEAGQDGKVYTRNGAFQVDRDGYVVNSSG 121

Query: 120 KYPVLDMASVPI 131
           +       + P 
Sbjct: 122 QRLQAYPPTTPN 133


>gi|134297198|ref|YP_001120933.1| flagellar hook protein FlgE [Burkholderia vietnamiensis G4]
 gi|134140355|gb|ABO56098.1| flagellar basal body FlaE domain protein [Burkholderia
           vietnamiensis G4]
          Length = 413

 Score = 84.1 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/149 (20%), Positives = 58/149 (38%), Gaps = 2/149 (1%)

Query: 8   GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVASGKEY 65
           GL+        L  + +N++N +TVGF++   +FS++           Q       G   
Sbjct: 6   GLSGLAGASNALDVIGNNIANANTVGFKSSTAQFSDMYANSIATSVNTQIGIGTTLGSVQ 65

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125
                G+  +T + LD A+ G+ +F + +      +RDG F+   +G +V+A G   +  
Sbjct: 66  KQFGQGTINTTNSSLDVAINGNGFFQMSNNGVTTYSRDGTFQRDKNGYIVNAQGMNLMGY 125

Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKV 154
            A     +     +        I+     
Sbjct: 126 AADKNGVVSTAQTVPLQAPTSNIAPTPTT 154



 Score = 68.4 bits (165), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 22/212 (10%), Positives = 55/212 (25%), Gaps = 9/212 (4%)

Query: 34  FRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE 93
           F        E    ++      +  V               S       A  G   F++ 
Sbjct: 204 FVKSAAGAWEAYAGVQGGTTTDLGTVKFDSSGAITSTTLPASA---TPTASLGQFQFSVP 260

Query: 94  SPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ-KG 152
           +  G    +     +T         G   +         +       +    G  S  + 
Sbjct: 261 TTDGSSTPQALTLDLTGTTQYGGKDGVNNLAQDGYASGTLTTFSIGADGKLTGNYSNGQT 320

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSM 207
            V+  + + + +   G +    +  +        +       +  T++   LE+SN +  
Sbjct: 321 AVLGQIAIANFNNPNGLINLGGNQYAETAASGVPQISAPGSTNHGTLQGSALENSNVDLT 380

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            ++  +I   + + +    I   +      I 
Sbjct: 381 SQLVNLITAQRNYQANAQTIKTQQTVDQTLIN 412


>gi|238919259|ref|YP_002932774.1| flagellar hook protein FlgE [Edwardsiella ictaluri 93-146]
 gi|238868828|gb|ACR68539.1| flagellar hook protein FlgE [Edwardsiella ictaluri 93-146]
          Length = 424

 Score = 84.1 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/134 (23%), Positives = 61/134 (45%), Gaps = 6/134 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
            F+  ++   A   +L  + +N++N+ TVGF++  V F+++         +    V    
Sbjct: 2   GFSQAISGMNAASTQLDVIGNNIANSQTVGFKSGSVTFADMFA-----GSKIGLGVKVAS 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLVSASGKYP 122
                + G+  +T   LD A+ G  +F +++P G +  +R+G+F     G L +A G Y 
Sbjct: 57  VDQDFKDGATTTTNRALDVAISGQGFFRMQAPNGSVNYSRNGQFTKDAKGFLTNAQGLYL 116

Query: 123 VLDMASVPIQIPQK 136
               A+      Q+
Sbjct: 117 TGYPAAGTPPTIQQ 130



 Score = 76.8 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 13/98 (13%), Positives = 35/98 (35%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLED 201
             +Q+ +++  + + +    +G     N+  S +                 T+  G +E 
Sbjct: 325 YTNQQKQLLGQIVMANFADPEGLTSEGNNEWSESAKSGQPIIGTSGTSGLGTLTSGAVEA 384

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   ++  MI   + + S    I   ++ +   + 
Sbjct: 385 SNVDLSKQLVDMIVAQRNYQSNAQTIKTQDQILQTLVN 422


>gi|261253614|ref|ZP_05946187.1| flagellar hook protein FlgE [Vibrio orientalis CIP 102891]
 gi|260937005|gb|EEX92994.1| flagellar hook protein FlgE [Vibrio orientalis CIP 102891]
          Length = 434

 Score = 84.1 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 57/129 (44%), Gaps = 6/129 (4%)

Query: 6   NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGK 63
            + L+   A +  L+T ++N++N +T GF+  + +F +V       +        V + K
Sbjct: 3   YVALSGLSAAQLDLNTTSNNIANANTYGFKESRAEFGDVYSNSLFTHAKTTPGQGVQAAK 62

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWF----ALESPRGIILTRDGRFKVTDDGSLVSASG 119
                  GS I T   +D  + G  +F       +P    LTR+G F +  D  +V+A+ 
Sbjct: 63  VAQQFHEGSSIYTNNPMDLRIGGTGFFAVAKDRLTPTSNELTRNGAFHLNKDNYMVTAND 122

Query: 120 KYPVLDMAS 128
           ++ +    +
Sbjct: 123 EFLLGYQVN 131



 Score = 67.6 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 12/98 (12%), Positives = 36/98 (36%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI-----PPTPLEDLSGVTVKRGFLED 201
             + +  ++  + +  V   QG  ++  +                   S  ++  G LE 
Sbjct: 335 YSNGENIILGRVAMVRVANEQGLDKKGGTQWDSTQFSGDKIWGESNKGSFGSISSGTLEQ 394

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E+  +I   + F + +  ++ + ++    ++
Sbjct: 395 SNIDMTQELVDLISAQRNFQANSRSLEVHNQTQQNILQ 432


>gi|170725955|ref|YP_001759981.1| flagellar hook protein FlgE [Shewanella woodyi ATCC 51908]
 gi|169811302|gb|ACA85886.1| flagellar basal body FlaE domain protein [Shewanella woodyi ATCC
           51908]
          Length = 453

 Score = 84.1 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 67/183 (36%), Gaps = 5/183 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61
           SFNI L+   A ++ L+T A+N++N +++GF+  + +F++V       N          +
Sbjct: 2   SFNIALSGISAAQKDLNTTANNIANVNSIGFKESRAEFADVYANSIFANSKTAVGGGATT 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALE---SPRGIILTRDGRFKVTDDGSLVSAS 118
            +       GS   T   LD A+ G  +F        +    TR G FKV  +  LV + 
Sbjct: 62  SQVAQQFHQGSLQFTNNALDMAINGGGFFVTSSSLDSQDHTFTRAGAFKVDSNNYLVDSQ 121

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178
           G +                           +     +       ++++ G    + +   
Sbjct: 122 GNFLQTFGVDKDGNSTSVSLTTTSPVIIPDTAGSPKMTDEIGIQMNLNAGDDTLDPAAFD 181

Query: 179 PNI 181
           PN 
Sbjct: 182 PND 184



 Score = 66.4 bits (160), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 15/138 (10%), Positives = 40/138 (28%), Gaps = 5/138 (3%)

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
                    +        D  +V      +     +      +     +A + L      
Sbjct: 314 YNNPTQYASTFEVTELTQDGTTVGRLTNVEVGADGLINASYSNGSTVPLARVALARFANE 373

Query: 167 QGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221
           QG  +  N+    ++             +  +++   LE SN +   E+  +I   + F 
Sbjct: 374 QGLTQVGNTSWKASLDSGLALAGEANSGTFGSIRSSALEQSNVDLTTELVDLISAQRNFQ 433

Query: 222 SITTLIDENEKSMLEAIR 239
           + +  ++ N       ++
Sbjct: 434 ANSRTLEVNNTLQQTVLQ 451


>gi|115523193|ref|YP_780104.1| flagellar hook protein FlgE [Rhodopseudomonas palustris BisA53]
 gi|115517140|gb|ABJ05124.1| flagellar basal body FlaE domain protein [Rhodopseudomonas
           palustris BisA53]
          Length = 411

 Score = 84.1 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 2/123 (1%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
              G +   A   +LSTVADN++N +T G++    +FS ++    +        V +   
Sbjct: 7   MRTGGSGMNAQSNKLSTVADNIANVNTTGYKRASTEFSSLILKSGS-GSYNSGSVETQVR 65

Query: 65  YLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGKYPV 123
           Y   + G+   T +  D A++G+ +FA+   RG   LTR G F    +G+LV+A G Y +
Sbjct: 66  YAISDPGTTQYTTSATDLAIQGNGFFAVADARGTPFLTRAGSFVPDGEGNLVNAGGYYLL 125

Query: 124 LDM 126
              
Sbjct: 126 GYN 128



 Score = 67.6 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/183 (12%), Positives = 48/183 (26%), Gaps = 9/183 (4%)

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALESPRGIILT----RDGRFKVTDDGSLVSASGKY 121
                 +  +     D +  G       SP  + LT          ++    + +     
Sbjct: 226 FPYSSPALATDTFTFDVSATGKGRLDAASPTSLALTIPGGSAFTLDLSTMTQVAAEFQFK 285

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
             +D  S       + +                   + L +V      V    +  S  I
Sbjct: 286 ATVDGNSPSAIEKVEVDGDGTMYAIYNDGTRLATYRIPLATVPSPDKLVPEVGNVYSVGI 345

Query: 182 PPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
               ++          TVK   LE SN +   E+  MI   + + + + +       +  
Sbjct: 346 DSGNVQVDFAGNSGLGTVKAKALEQSNVDLASELTAMIESQRGYTANSKVFQTGADLLDV 405

Query: 237 AIR 239
            + 
Sbjct: 406 LVN 408


>gi|291558205|emb|CBL35322.1| fagellar hook-basal body proteins [Eubacterium siraeum V10Sc8a]
          Length = 503

 Score = 84.1 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 23/143 (16%), Positives = 47/143 (32%), Gaps = 10/143 (6%)

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-----IATMGLY 161
                  +V   G   + D      Q  +  +   + E G I     V     +  + + 
Sbjct: 358 SNNFFSDMVQLLGNIKMTDGRVAATQTVKDLDSVYINEDGTIYGVHSVHGIIMLGRIDIV 417

Query: 162 SVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
           + D   G  +  +S     +     +     +    +V  G LE SN +   E   MI  
Sbjct: 418 TFDNPNGLEQVGSSYWRETLSSGQPQVNIAGENGSASVVSGALEMSNVDLSQEFSDMIIT 477

Query: 217 TQKFNSITTLIDENEKSMLEAIR 239
            + F + + +I  ++  + E + 
Sbjct: 478 QRGFQANSRIITTSDTMLEEIVN 500



 Score = 74.5 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 46/119 (38%), Gaps = 13/119 (10%)

Query: 19  LSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI------------DQKISFVASGKEYL 66
           +  + +N++N +T GF+T    F EV    K +              Q       G    
Sbjct: 1   MDVIGNNIANVNTTGFKTSVTTFQEVYYQTKKNGSAGSNLQGGVNPSQVGYGTKLGAIGQ 60

Query: 67  SKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYPVL 124
                 F  + +  D AL GD +F +      I  +R G F V + G+LV ++G   + 
Sbjct: 61  VMGQSGFTYSDSVYDCALSGDGFFQVMDEAGNIFYSRAGVFNVDNAGNLVDSNGNMVLG 119


>gi|331006033|ref|ZP_08329375.1| Flagellar hook protein flgE [gamma proteobacterium IMCC1989]
 gi|330420162|gb|EGG94486.1| Flagellar hook protein flgE [gamma proteobacterium IMCC1989]
          Length = 877

 Score = 84.1 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 54/153 (35%), Gaps = 2/153 (1%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV--GAIKNDIDQKISFVASG 62
           FN+ L+   A    L    +N++N  T GF+  + +F ++    A+ + ++Q  S V   
Sbjct: 3   FNVALSGIRAANSDLRVTGNNIANASTTGFKESRTEFGDIYSTSALGSGLNQPGSGVRVQ 62

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                   G+   T   LD ++ G  +F          TR G F +  +G +V+ +    
Sbjct: 63  DIAQQFGQGNISFTENSLDLSISGSGFFVTSFAGDQSFTRAGTFGLDQEGFIVNNTDARL 122

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI 155
               A     I        +            +
Sbjct: 123 QGFDADSSGNISGLIGDIQIQTTNIQPTATTGV 155



 Score = 76.8 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 33/98 (33%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLED 201
             + + +V+A + L      QG     ++                 T     ++ G LED
Sbjct: 778 YTNGENQVLAQVALADFANVQGLQSDGDTAWVQTFESGEPIIGGPGTASLGLIQSGALED 837

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   ++  +I   + F +    I+  +      I 
Sbjct: 838 SNVDLSEQLVNLIIAQRNFQANAKTIETADTITQTIIN 875


>gi|171321838|ref|ZP_02910739.1| flagellar basal body FlaE domain protein [Burkholderia ambifaria
           MEX-5]
 gi|171092876|gb|EDT38128.1| flagellar basal body FlaE domain protein [Burkholderia ambifaria
           MEX-5]
          Length = 413

 Score = 84.1 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 65/189 (34%), Gaps = 2/189 (1%)

Query: 8   GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVASGKEY 65
           GL+        L  + +N++N +TVGF++   +FS++           Q     A     
Sbjct: 6   GLSGLAGASNALDVIGNNIANANTVGFKSSTAQFSDMYANSIATSVNTQIGIGTALASVQ 65

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125
                G+  +T + LD A+ G+ +F + +      +RDG F+   +G +V+A G   +  
Sbjct: 66  QQFGQGTINTTNSSLDVAINGNGFFQMSNNGVTTYSRDGTFQRDKNGYIVNAQGLNLMGY 125

Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185
           ++     +     +        IS       T         +   +        +     
Sbjct: 126 LSDKNGVVNTAQTVPLQAPTTNISPTATTKITGQFNLNSQDKVPTKAPFDATDTSTYNYS 185

Query: 186 LEDLSGVTV 194
                  ++
Sbjct: 186 TSVQVYDSL 194



 Score = 68.0 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 11/98 (11%), Positives = 33/98 (33%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLED 201
             + +  V+  + + + +   G V    +  +        +       +  T++   LE+
Sbjct: 315 YSNGQTAVLGQIAIANFNNPNGLVNLGGNQYAETAASGVPQISAPGSTNHGTLQGSALEN 374

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   ++  +I   + + +    I   +      I 
Sbjct: 375 SNVDLTSQLVNLITAQRNYQANAQTIKTQQTVDQTLIN 412


>gi|330967090|gb|EGH67350.1| flagellar hook protein FlgE [Pseudomonas syringae pv. actinidiae
           str. M302091]
          Length = 441

 Score = 84.1 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 53/134 (39%), Gaps = 4/134 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA----IKNDIDQKISFV 59
           SFNIGL+   A  + L    +N++N  T GF++ + +F++             +      
Sbjct: 2   SFNIGLSGLYAANKSLDVTGNNIANVATTGFKSSRAEFADQYAQSIRGTSGQTNVGSGVS 61

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119
            +       +      T   LD A+ G+ +F L +    + TR G F    +G +V+++G
Sbjct: 62  TAAVSQQFSQGNLTTGTANSLDLAINGNGFFMLSNNGEKLYTRAGAFHTDKEGFVVNSAG 121

Query: 120 KYPVLDMASVPIQI 133
                        +
Sbjct: 122 MKLQGYNVDANGSV 135



 Score = 64.1 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 16/123 (13%), Positives = 34/123 (27%), Gaps = 5/123 (4%)

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
              D  +         +          + K +VI    L +    QG  +   +      
Sbjct: 317 QDQDGYATGQLSAMSVDSTGNLFATYTNGKSQVIGQTSLTNFANVQGLAQAGGTNWRETF 376

Query: 182 PPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                     +  +  ++    LE+SN +   E+  +I     + +    I      M  
Sbjct: 377 ASGVPVSGTPQSGTLGSITGQALEESNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQT 436

Query: 237 AIR 239
            I+
Sbjct: 437 TIQ 439


>gi|319944135|ref|ZP_08018413.1| flagellar hook protein FlgE [Lautropia mirabilis ATCC 51599]
 gi|319742629|gb|EFV95038.1| flagellar hook protein FlgE [Lautropia mirabilis ATCC 51599]
          Length = 417

 Score = 84.1 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/135 (23%), Positives = 59/135 (43%), Gaps = 3/135 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F  GL+   A  + L T+  N++N  TVGF+  + +F++V       +      + +  
Sbjct: 2   AFQQGLSGLNAAARHLDTIGHNVANASTVGFKASRAEFADVYATTVYGVSNVSPGIGTEV 61

Query: 64  --EYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGK 120
                    G+  +T   LD  + G  +F + ++   I  TR+G+FK+   G +V+ASGK
Sbjct: 62  GAIAQQFSQGALTTTNNSLDLGINGGGFFRMSDNGGAITYTREGQFKLDKSGYIVNASGK 121

Query: 121 YPVLDMASVPIQIPQ 135
                       +  
Sbjct: 122 RLTGYPVDKNGVVTN 136



 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 13/89 (14%), Positives = 29/89 (32%), Gaps = 5/89 (5%)

Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEM 210
             + L +    QG      +              S  T     ++ G LE SN +   E+
Sbjct: 327 GRVALANFTNPQGLQPLGGNQWGETADSGAPLVGSPSTGTLGVIQSGALESSNVDLTQEL 386

Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             MI   + + +    +  +++ +   + 
Sbjct: 387 VNMITAQRVYQANAQTVRTHDQLLQTIVN 415


>gi|254230140|ref|ZP_04923535.1| FlgE [Vibrio sp. Ex25]
 gi|262394939|ref|YP_003286793.1| flagellar hook protein FlgE [Vibrio sp. Ex25]
 gi|151937333|gb|EDN56196.1| FlgE [Vibrio sp. Ex25]
 gi|262338533|gb|ACY52328.1| flagellar hook protein FlgE [Vibrio sp. Ex25]
          Length = 437

 Score = 84.1 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 72/200 (36%), Gaps = 7/200 (3%)

Query: 6   NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGK 63
            + L+   A +  L+T ++N++N +T GF+  + +F++V       N          + +
Sbjct: 3   YVSLSGLSAAQLDLNTTSNNIANANTYGFKESRAEFADVYSNSLFTNAKTTPGGGAQASQ 62

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWF----ALESPRGIILTRDGRFKVTDDGSLVSASG 119
                  GS I T   +D  + G  +F       +P+   LTR+G F +  +  +V+A+ 
Sbjct: 63  VAQQFHEGSSIYTNNPMDLRVSGTGFFAVAKERLTPQQNELTRNGAFHLNKENYMVTAND 122

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV-RRENSGIS 178
           ++ +              E   +    E  +  +        ++  +       +     
Sbjct: 123 EFLLGYQVDPSSGEVSSYEPQPINIPAEFGKPKQTANIEVGVNLPANGDLKDPTQFDFSD 182

Query: 179 PNIPPTPLEDLSGVTVKRGF 198
           P+            ++ + +
Sbjct: 183 PDTYNRSTSSTIYDSMGQSY 202



 Score = 65.7 bits (158), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 34/98 (34%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI-----PPTPLEDLSGVTVKRGFLED 201
             + +   +  + L  V   QG  ++  +                   S  T+  G LE 
Sbjct: 338 YSNGENVTLGRVALVRVPNEQGLDKKGGTQWDSTQFSGDKIWGESNKGSFGTINNGMLEQ 397

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E+  +I   + F + +  ++ + +     ++
Sbjct: 398 SNIDMTQELVDLISAQRNFQANSRSLEVHNQLQQNILQ 435


>gi|239906284|ref|YP_002953024.1| flagellar hook protein FlgE [Desulfovibrio magneticus RS-1]
 gi|239796149|dbj|BAH75138.1| flagellar hook protein FlgE [Desulfovibrio magneticus RS-1]
          Length = 518

 Score = 84.1 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/138 (23%), Positives = 61/138 (44%), Gaps = 6/138 (4%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---DIDQKISF 58
            +S   G++  L   Q ++T  +N++N +TVG+++ ++ F++++  +     D  Q  + 
Sbjct: 1   MSSIWTGVSGLLTYSQGIATTGNNLANVNTVGYKSSRMLFADMISTMAGGTSDGSQIGTG 60

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALES---PRGIILTRDGRFKVTDDGSLV 115
           V  G   L  EVGS        D A+ G+  + +           TR G F    +G+L+
Sbjct: 61  VQVGSIALQTEVGSLQDASNSTDLAITGERGYFVVKDAANDKTYYTRAGDFNFDKNGNLM 120

Query: 116 SASGKYPVLDMASVPIQI 133
           SA+G             +
Sbjct: 121 SATGCNVQGWAVDQDAIL 138



 Score = 72.2 bits (175), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 61/205 (29%), Gaps = 10/205 (4%)

Query: 40  KFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
           +FS    +  N      S   + K  LS   GS+ S       A+  +A   +       
Sbjct: 316 EFSATFKSASNGS-ALPSQTIAFKTGLSATDGSWNSGSAANAGAIGTNAALNIGYNPSST 374

Query: 100 LTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG 159
           L            S    S +            + +   I+     G+     K +  + 
Sbjct: 375 LNAVYCTTNYATSSYTQTSSQDGYAKGEMTATNVDENGVIWGSFTNGQ----TKALYVLA 430

Query: 160 LYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMI 214
           L          R  N+ +SP                  ++    LE SN +   EM  +I
Sbjct: 431 LADFTNPTDLYRNGNNLLSPTTESGKATVGRANSGVFDSIAGNTLESSNVDMASEMVNLI 490

Query: 215 HLTQKFNSITTLIDENEKSMLEAIR 239
              + F + + ++   E  M  A++
Sbjct: 491 INQRAFQANSKVVTTAESLMETALQ 515


>gi|85712254|ref|ZP_01043305.1| flagellar hook protein [Idiomarina baltica OS145]
 gi|85693881|gb|EAQ31828.1| flagellar hook protein [Idiomarina baltica OS145]
          Length = 466

 Score = 84.1 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/167 (23%), Positives = 64/167 (38%), Gaps = 5/167 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61
           SFNI L+   + ++ L   A+N++N  T GF+  + +F++V           Q  +  A+
Sbjct: 2   SFNIALSGISSAQKDLDVTANNVANVRTTGFKGSRAEFADVFANNIFSGSDQQTGNGSAT 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI---ILTRDGRFKVTDDGSLVSAS 118
                    G+   T   LD A+ G+ +FA  S         TR G FK+ DD  +V+  
Sbjct: 62  ASVAQQFSQGTLNFTQNSLDMAISGNGFFATTSGIAQQDFTYTRAGAFKLNDDSYIVNNQ 121

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           G++             Q   +   G        G   AT   Y    
Sbjct: 122 GRFLHGFPVDSASGATQSTSLAASGPIRIPDSAGAPSATENQYQSFN 168



 Score = 62.6 bits (150), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 15/125 (12%), Positives = 38/125 (30%), Gaps = 5/125 (4%)

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                D  +V            +      +   + +  + L      QG  +  ++  S 
Sbjct: 340 NLLEQDGTTVGRLTNIDIAEDGLISASYSNGDVQYLGKVALVRFANEQGLTQLGDASWSE 399

Query: 180 NIPPTPLEDLS-----GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
           +                 T++   LE+SN +   E+  +I   + F + +  ++ N    
Sbjct: 400 SQSSGIATSGEANSGVFGTIEASALENSNVDLTKELVDLISAQRNFQANSRSLEINNSLQ 459

Query: 235 LEAIR 239
              ++
Sbjct: 460 QNILQ 464


>gi|255022066|ref|ZP_05294072.1| Flagellar hook protein flgE [Acidithiobacillus caldus ATCC 51756]
 gi|254968552|gb|EET26108.1| Flagellar hook protein flgE [Acidithiobacillus caldus ATCC 51756]
          Length = 416

 Score = 84.1 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/172 (20%), Positives = 70/172 (40%), Gaps = 9/172 (5%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV----GAIKNDIDQKISFV 59
            +N  ++   A +  L+T+ +N++N +TVGF+    +F ++                  V
Sbjct: 2   GYNTAISGLDAAQTDLNTIGNNIANVNTVGFKESNAQFGDLYAASLAGSAGASTTPGIGV 61

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSA-- 117
           ++     +   G+  +TG  LD A+ G  +F + +   +  TR+G+F V+ +G L +   
Sbjct: 62  STVDLSQNFTQGNIQTTGNPLDMAINGPGFFIVNNNGTMDYTRNGQFHVSSNGVLENNGD 121

Query: 118 ---SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
               G  PV         I     I       + + +  ++A +    V  S
Sbjct: 122 LPVQGFQPVPGSNGRFSTILSNLTISESAMPPQATSQAALVANLNANDVPPS 173



 Score = 63.3 bits (152), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/138 (16%), Positives = 45/138 (32%), Gaps = 9/138 (6%)

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
            +T+    V++             I +    EI      G+     K I  + L +    
Sbjct: 282 TLTNSPFAVTSENVNGYAPGTYSSISVQSTGEIDANYTNGQK----KAIGKVALANFANL 337

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFN 221
           QG      +  S           S  T     ++ G +E SN +   ++  MI   Q + 
Sbjct: 338 QGLAPISGNLWSATATAGNPLVNSPGTAGLGVIQSGAVESSNVSLSSQLVDMIVAQQAYQ 397

Query: 222 SITTLIDENEKSMLEAIR 239
           + T+ I   ++     ++
Sbjct: 398 ANTSTIKTEQQDTQSLLQ 415


>gi|291524892|emb|CBK90479.1| fagellar hook-basal body proteins [Eubacterium rectale DSM 17629]
          Length = 477

 Score = 83.8 bits (205), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 50/145 (34%), Gaps = 18/145 (12%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  S    ++     + R+  + +N++N +T  F+   V+FSE++    +          
Sbjct: 1   MMRSLYSAVSGLKTHQTRMDVIGNNIANVNTEAFKASSVRFSEIMYQTTSGTSAGNGAAG 60

Query: 61  SG---------------KEYLSKEVGSFISTGTELDFALEGD---AWFALESPRGIILTR 102
           +G                       GS  +TG   D  L       +F +      + TR
Sbjct: 61  TGGKNAKQIGLGVKSGATAVNITGAGSAETTGNPFDLRLNDKNATNFFVVSDGTNRLFTR 120

Query: 103 DGRFKVTDDGSLVSASGKYPVLDMA 127
            G F V  +G L  +S  Y +    
Sbjct: 121 AGDFYVDGNGYLCMSSTGYTLQGWQ 145



 Score = 76.8 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 22/209 (10%), Positives = 60/209 (28%), Gaps = 12/209 (5%)

Query: 38  KVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG 97
           +  F +             S  ++        +   +S     D ++ G  +    S   
Sbjct: 271 QTIFEDASLVFDQSEGTFTSISSANSPAAKT-INLNLSVLNTQDASINGSNF----SNIE 325

Query: 98  IILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA- 156
           +  ++   +      ++   +G             +       +    G       V+  
Sbjct: 326 VDFSKSMNYNNNGTSTIGGMNGDLQGDGKGKALGALTGITVSDDGKIYGSYDNGNTVLLC 385

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLE------DLSGVTVKRGFLEDSNANSMYEM 210
            + +     + G  +  ++     +     +         G ++  G LE SN +   + 
Sbjct: 386 QIAVAQFANASGLEKIGDNCYQSTLNSGEFDGIGVEISADGGSISSGELEMSNVDLSSQF 445

Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             MI   + F + + +I  ++  + E I 
Sbjct: 446 TDMIVTQRGFQANSRVITTSDTLLEELIN 474


>gi|289679029|ref|ZP_06499919.1| flagellar hook protein FlgE [Pseudomonas syringae pv. syringae FF5]
          Length = 279

 Score = 83.8 bits (205), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 53/134 (39%), Gaps = 4/134 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA----IKNDIDQKISFV 59
           SFNIGL+   A  + L    +N++N  T GF++ + +F++           + +      
Sbjct: 2   SFNIGLSGLYAANKSLDVTGNNIANVATTGFKSSRAEFADQYAQSIRGTSGNTNVGSGVR 61

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119
            +       +      T   LD A+ GD +F + +    + TR G F    +G +V++S 
Sbjct: 62  TAAVSQQFSQGSLTTGTANSLDLAINGDGFFMMSNNGEKLYTRAGAFHTDKEGYVVNSSN 121

Query: 120 KYPVLDMASVPIQI 133
                        +
Sbjct: 122 MKLQGYNVDANGSV 135


>gi|325529014|gb|EGD06027.1| flagellar hook protein FlgE [Burkholderia sp. TJI49]
          Length = 413

 Score = 83.8 bits (205), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 56/135 (41%), Gaps = 2/135 (1%)

Query: 8   GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVASGKEY 65
           GL+        L  + +N++N +TVGF++   +FS++           Q           
Sbjct: 6   GLSGLAGASNALDVIGNNIANANTVGFKSSTAQFSDMYANSIATSVNTQIGIGTTLASVQ 65

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125
                G+  +T + LD A+ G+ +F + +   +  TRDG F+   +G +V+A G   +  
Sbjct: 66  QQFGQGAINATSSSLDVAINGNGFFQMSNNGAMTYTRDGTFQRDKNGYIVNAQGLNLMGY 125

Query: 126 MASVPIQIPQKDEIF 140
            A     I     + 
Sbjct: 126 AADKNGVINTAQTVP 140



 Score = 66.0 bits (159), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 11/98 (11%), Positives = 31/98 (31%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLED 201
             + +   +  + L + +   G V    +           +       +  T++   LE+
Sbjct: 315 YSNGQTATLGQIALANFNNPNGLVNIGGNQYVETAASGVPQISAPGSTNHGTLQGSALEN 374

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   ++  +I   + + +    I   +      I 
Sbjct: 375 SNVDLTSQLVNLITAQRNYQANAQTIKTQQTVDQTLIN 412


>gi|292670487|ref|ZP_06603913.1| flagellar basal body and hook protein [Selenomonas noxia ATCC
           43541]
 gi|292647897|gb|EFF65869.1| flagellar basal body and hook protein [Selenomonas noxia ATCC
           43541]
          Length = 506

 Score = 83.8 bits (205), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 59/163 (36%), Gaps = 14/163 (8%)

Query: 19  LSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------------QKISFVASGKEYL 66
           +  + +N++N +T GF+  +V F +++    +               Q    V+ G    
Sbjct: 1   MDVIGNNIANVNTTGFKAGRVTFEDMLSQTLSGAASPGTTIGGTNPKQVGLGVSVGGIDT 60

Query: 67  SKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDM 126
               GS  STG   D AL G+A F ++       TR+G F+    G+ V  S    V   
Sbjct: 61  IFSDGSVQSTGKNTDLALTGNALFVVKRGDQTYYTRNGAFEFDAKGNYVLPSSGLHVQGW 120

Query: 127 ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169
            +                +  +   G+++      +V  S+  
Sbjct: 121 MNKTT--NNSKVSTEGAAENIVIDAGRIMGPEQTDTVSYSENL 161



 Score = 73.4 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 30/90 (33%), Gaps = 6/90 (6%)

Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPT------PLEDLSGVTVKRGFLEDSNANSMYE 209
           A +G+       G  +   S    +             + +G  +    LE SN +   +
Sbjct: 414 AQIGVAKFSNPSGLTKIGGSLYQESNNSNSKVVRAQTVESTGAKITPSALEMSNVDIADQ 473

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              MI   + F S + +I   ++ +   I 
Sbjct: 474 FSDMIITQRGFQSNSKVITVGDEMLETLIN 503


>gi|302382558|ref|YP_003818381.1| fagellar hook-basal body protein [Brevundimonas subvibrioides ATCC
           15264]
 gi|302193186|gb|ADL00758.1| fagellar hook-basal body protein [Brevundimonas subvibrioides ATCC
           15264]
          Length = 478

 Score = 83.8 bits (205), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 68/204 (33%), Gaps = 7/204 (3%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
            ++   G++   A    L+ ++ N++N +TVG++    +FS VV +           V +
Sbjct: 4   NSALLAGVSGLTANSAALAAISQNIANVNTVGYKRTAAEFSTVVNSQSQGAGYSAGGVLA 63

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALES-------PRGIILTRDGRFKVTDDGSL 114
                  + G    T +  D  + G  +F               + TR G F+V + G L
Sbjct: 64  NTRNYIAQGGQLQRTTSSTDLGIAGQGFFVTTEKAEGLDAGDARLFTRAGAFRVDNFGYL 123

Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174
            + +G Y      +    IP             +   G          V+ +    +  +
Sbjct: 124 KNTAGLYLQGWPVNAEGDIPTDPSDLGKLTSINVGSVGGTAEATTRAQVNANLKSSQAVS 183

Query: 175 SGISPNIPPTPLEDLSGVTVKRGF 198
           + I+     T        T   GF
Sbjct: 184 ADIATYSTATKSMSTYNATTGTGF 207



 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 16/123 (13%), Positives = 40/123 (32%), Gaps = 1/123 (0%)

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
            +      +++++ I                   +  +       S+  + G   R + G
Sbjct: 354 VTNGTAFGNLSNIEIDEEGYVTAIFDNGVTRRIAQVALATFTSADSLTPASGNAYRVSQG 413

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                  TP    +G+      LE S  +   E   +I   + +++ + +I   ++ + E
Sbjct: 414 SGTFNLKTPGAGGAGLIGAS-QLEASTVDLSAEFTGLITTQRAYSASSKIITTADEMLAE 472

Query: 237 AIR 239
            I 
Sbjct: 473 LIS 475


>gi|148976394|ref|ZP_01813100.1| flagellar hook protein E [Vibrionales bacterium SWAT-3]
 gi|145964217|gb|EDK29473.1| flagellar hook protein E [Vibrionales bacterium SWAT-3]
          Length = 434

 Score = 83.8 bits (205), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/207 (14%), Positives = 67/207 (32%), Gaps = 13/207 (6%)

Query: 6   NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGK 63
            + L+   A +  L+T ++N++N +T GF+  + +F +V       N          + +
Sbjct: 3   YVALSGLSAAQLDLNTTSNNIANANTFGFKESRAEFGDVYSNSLFTNAKTTSGGGAQASQ 62

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWF----ALESPRGIILTRDGRFKVTDDGSLVSASG 119
                  GS I T   +D  + G  +F        P    LTR+G F +  D  +V+A+ 
Sbjct: 63  VAQQFHEGSSIYTNNPMDLRVSGTGFFAVAKDRMVPEINELTRNGAFHLNKDNYMVTAND 122

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF-------VRR 172
           ++ +                  +    E  +  +        ++  +           + 
Sbjct: 123 EFLLGYDVDPNSGEVLSYAPKPLDIPAEFGKPKQTENIEVGVNLPANGDLKDPAAFNFKD 182

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFL 199
            ++                  +   +L
Sbjct: 183 ADTYNRATSSTVYDSMGQSYKLTTYYL 209



 Score = 68.0 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 19/145 (13%), Positives = 48/145 (33%), Gaps = 6/145 (4%)

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ-KGKVIATMG 159
           T+  +F +       +        +  +    + + D        G  S  +  ++  +G
Sbjct: 288 TQVLKFGLDSSTQFAAPFELTKFDEDGATTGFLTKIDFDEYGSVLGTYSNGENVMLGRVG 347

Query: 160 LYSVDMSQGFVRRENSGISPNIP-----PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMI 214
           L  V   QG  ++  +                   S  ++  G LE SN +   E+  +I
Sbjct: 348 LVRVPNEQGLDKKGGTQWDSTNDSGDKIWGESNKGSFGSINNGSLEQSNIDMTQELVDLI 407

Query: 215 HLTQKFNSITTLIDENEKSMLEAIR 239
              + F + +  ++ + +     ++
Sbjct: 408 SAQRNFQANSRSLEVHNQLQQNILQ 432


>gi|119899027|ref|YP_934240.1| FlgE protein [Azoarcus sp. BH72]
 gi|119671440|emb|CAL95353.1| FlgE protein [Azoarcus sp. BH72]
          Length = 445

 Score = 83.8 bits (205), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 58/125 (46%), Gaps = 4/125 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID---QKISFVA 60
           +F  GL+   +  + L  +++N++N  TVGF+     F+++  +         Q      
Sbjct: 2   AFQQGLSGLNSSSKALDVISNNVANASTVGFKASNTIFADMYASAMTGGTSSLQVGIGSK 61

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119
                 S   G+  +T   LD A+ G+ +F    S   I  +R+G+F V  +G++V+A+G
Sbjct: 62  VAAVTQSFTQGNLTATNNPLDMAINGNGFFRLSRSDGSIAYSRNGQFDVDRNGNIVNATG 121

Query: 120 KYPVL 124
           +    
Sbjct: 122 EKLTG 126



 Score = 73.4 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 53/170 (31%), Gaps = 11/170 (6%)

Query: 81  DFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY------PVLDMASVPIQIP 134
           D  + G+  F +      + T       T D S  +           P  D  +      
Sbjct: 274 DSTIAGNGVFNVTRTGAQLGTGADDLNFTLDLSRSTQWNTDSGVTTSPRQDGYTTGRLTG 333

Query: 135 QKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT- 193
                  V +    + + + IA + L +    QG     ++  + +         +  T 
Sbjct: 334 LSVSNTGVVQGTFSNGQVRDIARLALANFSSPQGLTSLGDNLWAESFESGQPTVGAPGTG 393

Query: 194 ----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
               V  G +E+SN +   E+  MI   + + +    I   ++ +   + 
Sbjct: 394 VLGSVTAGQIEESNVDLTQELVSMIVQQRNYQANAQSIRTQDQILQTLVN 443


>gi|294635610|ref|ZP_06714087.1| flagellar hook protein FlgE [Edwardsiella tarda ATCC 23685]
 gi|291091062|gb|EFE23623.1| flagellar hook protein FlgE [Edwardsiella tarda ATCC 23685]
          Length = 411

 Score = 83.8 bits (205), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 63/166 (37%), Gaps = 6/166 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
            F+  ++   A   +L  + +N++N+ TVGF++  V F+++         +    V    
Sbjct: 2   GFSQAISGMNAASSQLDVIGNNIANSQTVGFKSGSVTFADMFA-----GSKVGLGVTVAS 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122
                + G+  +T   LD A+ G  +F ++ P   +  TR+G+F     G L +A G Y 
Sbjct: 57  VNQDFKDGTTTTTNRGLDVAISGQGFFRMQDPNGSVYYTRNGQFSKDAKGFLTNAQGMYL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
               AS      Q+       +        K      +     S  
Sbjct: 117 TGYPASGTPPTIQQGADPVPIQIPTGLMPAKSTTQGSMVLNLNSAN 162



 Score = 74.1 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 15/122 (12%), Positives = 39/122 (31%), Gaps = 5/122 (4%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             D          +            +Q+ +++  + + +    +G V   N+  S +  
Sbjct: 288 TQDGYKAGELTGYQINDDGTITGSYTNQQKQLLGQIVMANFAAPEGLVSEGNNVWSESAK 347

Query: 183 PTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                  +  T     +  G +E SN +   ++  MI   + + S    I   ++ +   
Sbjct: 348 SGQPIVGTSGTSGLGNLTSGAVEASNVDLSKQLVDMIVAQRNYQSNAQTIKTQDQILQTL 407

Query: 238 IR 239
           + 
Sbjct: 408 VN 409


>gi|209547530|ref|YP_002279448.1| flagellar hook protein FlgE [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209538774|gb|ACI58708.1| protein of unknown function DUF1078 domain protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 430

 Score = 83.8 bits (205), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/163 (23%), Positives = 69/163 (42%), Gaps = 2/163 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           S    ++   A   RLSTV+DN++N +TVG++ +   FS +V    +  +     V +  
Sbjct: 6   SMKTAVSGMSAQANRLSTVSDNIANANTVGYKAVSTSFSSLVLPSSSG-NYNSGGVQTSV 64

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGKYP 122
                + G    T ++ D A+ GD +F ++S  G  +LTR G F V  DG+LV+ +G   
Sbjct: 65  RQAISQQGDISYTTSDYDLAISGDGFFIVQSADGTPVLTRAGDFSVDSDGNLVNGAGFTL 124

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           +       +     +    +            +A+   Y    
Sbjct: 125 MGYSYDSGVPAVVVNGFDGLVPVNVSQSGLSAVASTSAYFSGN 167



 Score = 71.8 bits (174), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 27/73 (36%), Gaps = 1/73 (1%)

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
            G V   N      +   P  +    +++ G LE SN +   E+ +MI   + + + + +
Sbjct: 356 SGNVYSANGQSGVTVTGFPQTNG-LGSIQSGALESSNVDLAGELTEMIEAQRSYTANSKV 414

Query: 227 IDENEKSMLEAIR 239
                  M   + 
Sbjct: 415 FQTGSDIMDVLVN 427


>gi|291529033|emb|CBK94619.1| fagellar hook-basal body proteins [Eubacterium rectale M104/1]
          Length = 477

 Score = 83.8 bits (205), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 50/145 (34%), Gaps = 18/145 (12%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  S    ++     + R+  + +N++N +T  F+   V+FSE++    +          
Sbjct: 1   MMRSLYSAVSGLKTHQTRMDVIGNNIANVNTEAFKASSVRFSEIMYQTASGASAGNGATG 60

Query: 61  SG---------------KEYLSKEVGSFISTGTELDFALEGD---AWFALESPRGIILTR 102
           +G                       GS  +TG   D  L       +F +      + TR
Sbjct: 61  TGGKNAKQIGLGVKSGATAVNITGAGSAETTGNPFDLRLNDKNATNFFVVSDGTNRLFTR 120

Query: 103 DGRFKVTDDGSLVSASGKYPVLDMA 127
            G F V  +G L  +S  Y +    
Sbjct: 121 AGDFYVDGNGYLCMSSTGYTLQGWQ 145



 Score = 76.8 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 22/209 (10%), Positives = 61/209 (29%), Gaps = 12/209 (5%)

Query: 38  KVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG 97
           +  F +             S  ++        +   +S     D ++ G  +    S   
Sbjct: 271 QTIFEDASLVFDQSEGTFTSISSANSPAAKT-INLNLSVLNTQDASINGSNF----SNIE 325

Query: 98  IILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA- 156
           +  ++   +      ++   +G             +       +    G       V+  
Sbjct: 326 VDFSKSMNYNNNGTSTIGGMNGNLQGDGKGKALGALTGITVSDDGKIYGSYDNGNTVLLC 385

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLE------DLSGVTVKRGFLEDSNANSMYEM 210
            + +     + G  +  ++     +  +  +         G ++  G LE SN +   + 
Sbjct: 386 QIAVAQFANASGLEKIGDNCYQSTLNSSEFDGIGVEISADGGSISSGELEMSNVDLSSQF 445

Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             MI   + F + + +I  ++  + E I 
Sbjct: 446 TDMIVTQRGFQANSRVITTSDTLLEELIN 474


>gi|121601827|ref|YP_989383.1| flagellar hook protein FlgE [Bartonella bacilliformis KC583]
 gi|120614004|gb|ABM44605.1| flagellar hook protein FlgE [Bartonella bacilliformis KC583]
          Length = 404

 Score = 83.8 bits (205), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/126 (28%), Positives = 56/126 (44%), Gaps = 2/126 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
             +  ++   A  +RLS +A+N++N  TVG++   V+FS  V     D       V S  
Sbjct: 6   MMHTSVSGMNAQGKRLSGIAENVANAGTVGYKRTNVQFSNYVTP-SGDYAYVPGGVKSHV 64

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122
            +     G   +TG   D  + G+ +F +E       LTR G F    DG L ++SG Y 
Sbjct: 65  GHDISIYGPARATGRPGDAMINGNGFFRVEDENGNEFLTRAGSFSRDKDGYLRNSSGHYL 124

Query: 123 VLDMAS 128
           + D   
Sbjct: 125 LNDEGQ 130



 Score = 69.9 bits (169), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 36/98 (36%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLED 201
             +QK +VI+ +GL +V   +       +    N                 ++  G+LED
Sbjct: 304 YTNQKTRVISYVGLATVTSPESLTVLSGTVFQTNTRTGAQMVGRPGDGVFGSLTAGYLED 363

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN     E+  MI   + + + + +     + M   + 
Sbjct: 364 SNVEMSEELTDMIESQRNYTANSKVFQTGSELMDVIVN 401


>gi|315636309|ref|ZP_07891559.1| flagellar hook protein FlgE [Arcobacter butzleri JV22]
 gi|315479398|gb|EFU70081.1| flagellar hook protein FlgE [Arcobacter butzleri JV22]
          Length = 583

 Score = 83.8 bits (205), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 58/125 (46%), Gaps = 5/125 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M ++   G++     ++ +S  ++N++N+ T G +  ++ F++++             V+
Sbjct: 1   MISALWNGVSGISNYDKGISVESNNIANSSTTGHKLDEITFADMLYTNGG----YGKGVS 56

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASG 119
           +         GS  STG  LD A++G  +F + +    I  TR G FK T DG L +  G
Sbjct: 57  TQSISKQFAQGSINSTGATLDMAIDGKGFFIVSDKAGEIYYTRAGDFKQTKDGWLQTQDG 116

Query: 120 KYPVL 124
              + 
Sbjct: 117 MNVLG 121



 Score = 63.0 bits (151), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/241 (14%), Positives = 74/241 (30%), Gaps = 11/241 (4%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRT---IKVKFSEVVGAIKNDIDQKISF 58
           QTS+N    A  A +     +++      T G+       V   E + A K+        
Sbjct: 346 QTSYNTAKNAISAYKDLADKISN------TAGYSASVKDGVLTVESLIAGKSFNITDAKL 399

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSAS 118
             +G      +     S    +D A +     A+E   G  L      +  + GS  ++ 
Sbjct: 400 NDTGVNATVSQEAVAGSGMAMVDSA-KDALKQAVEKAGGKFLEITNVMEYANLGSYGTSD 458

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS-GI 177
               +  +  V     +     +            ++  +   +    QG     ++   
Sbjct: 459 LNLRLDTLGLVEGDFGEASVSDDGFVFVTSGDNKFLVGRVSTAAFRNEQGLEAVGDNKYS 518

Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
           +     T         +K   LE SN +    +  ++   + + + +  I  ++  +  A
Sbjct: 519 ATKSSGTAYNADGMNKIKEKSLERSNVSYSSTLTSLMVYQRAYEASSKSITTSDDFLKTA 578

Query: 238 I 238
           I
Sbjct: 579 I 579


>gi|254508422|ref|ZP_05120542.1| flagellar hook protein [Vibrio parahaemolyticus 16]
 gi|219548632|gb|EED25637.1| flagellar hook protein [Vibrio parahaemolyticus 16]
          Length = 438

 Score = 83.8 bits (205), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 57/132 (43%), Gaps = 6/132 (4%)

Query: 6   NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGK 63
            + L+   A +  L+T ++N++N +T GF+  + +F +V       N        V + K
Sbjct: 3   YVALSGISAAQLDLNTTSNNIANANTFGFKESRAEFGDVYSNSLFTNAKTTPGGGVQAQK 62

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWF----ALESPRGIILTRDGRFKVTDDGSLVSASG 119
                  GS + T   +D  + G  +F       +P    LTR+G F +  D  +V+A+ 
Sbjct: 63  VAQQFHEGSSVYTNNPMDLRISGTGFFAVAKDRLTPTTNELTRNGAFHLNKDNYMVTAND 122

Query: 120 KYPVLDMASVPI 131
           +Y +    +   
Sbjct: 123 EYLLGYQVNGDT 134



 Score = 67.2 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 12/98 (12%), Positives = 35/98 (35%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI-----PPTPLEDLSGVTVKRGFLED 201
             + +   +  + +  V   QG  ++  +                   S  ++  G LE 
Sbjct: 339 YSNGENITLGRVAMVRVANEQGLDKKGGTQWDSTQFSGDKIWGESNKGSFGSINSGTLEQ 398

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E+  +I   + F + +  ++ + ++    ++
Sbjct: 399 SNIDMTQELVDLITAQRNFQANSRSLEVHNQTQQNILQ 436


>gi|152980177|ref|YP_001353111.1| flagellar hook protein FlgE [Janthinobacterium sp. Marseille]
 gi|151280254|gb|ABR88664.1| FlgE flagellar hook protein [Janthinobacterium sp. Marseille]
          Length = 416

 Score = 83.8 bits (205), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 2/134 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID--QKISFVAS 61
           SF  GL+   A  + L  + +N++N+ TVGF+  +V+F+++  +  +     Q    V  
Sbjct: 2   SFQQGLSGLNAASKSLEAIGNNVANSGTVGFKQSQVQFADIYASTLSGSGAAQIGIGVQV 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
            +       G+   +   LD A+ GD +F + S   I   R+G+F++T +G + +ASG  
Sbjct: 62  ARVAQLFSQGNIAVSNNPLDMAINGDGFFRMSSGGSITYGRNGQFELTKEGYIQNASGAR 121

Query: 122 PVLDMASVPIQIPQ 135
               MA     +  
Sbjct: 122 LTGYMADANGVVQN 135



 Score = 75.7 bits (184), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 39/129 (30%), Gaps = 6/129 (4%)

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG-KVIATMGLYSVDMSQGFVRRENS 175
           A G    L     P  +   D   +    G  S     V+  + L S     G     ++
Sbjct: 286 AFGVSKNLPDGYRPGTLTGFDVASDGSIMGRYSNGEVNVLGQVILSSFANPNGLQNIGDN 345

Query: 176 GISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
                         +  +     V+   +E+SN +   E+  MI   + + +    I   
Sbjct: 346 QWVETAESGVPLTSTPGSSGLGVVQSARIEESNVDLTAELVNMITAQRVYQANAQTIKTQ 405

Query: 231 EKSMLEAIR 239
           ++ M   + 
Sbjct: 406 DQIMQTLVN 414


>gi|255021354|ref|ZP_05293402.1| Flagellar hook protein flgE [Acidithiobacillus caldus ATCC 51756]
 gi|254969217|gb|EET26731.1| Flagellar hook protein flgE [Acidithiobacillus caldus ATCC 51756]
          Length = 419

 Score = 83.8 bits (205), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 4/120 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI----DQKISFV 59
           +F+  L+   A    L  + +N+SN +TVGF++   +F++  GA          Q     
Sbjct: 3   AFSTALSGLQAANTDLQVLGNNISNANTVGFKSSNAEFADAYGAALVGSAPTYGQVGIGT 62

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119
                      G+  +T   LD A+ G+ +F L     I+ +R+G+F++   G +V  +G
Sbjct: 63  RVMTVAQQFTQGNIQTTNNPLDVAINGNGFFQLNYNGDIVYSRNGQFQLNSGGVIVDGNG 122



 Score = 37.9 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 18/128 (14%), Positives = 41/128 (32%), Gaps = 1/128 (0%)

Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172
           + V ++            + I     I+     G+    G++  T    +  +       
Sbjct: 291 NAVVSATTNGYGVGQLTGLSIDPGGNIYARYSNGQSQVLGQIALTRFANNNGLQNLGNNY 350

Query: 173 ENSGISPNIPPTPLEDLSGVTVKR-GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
             S  S  +P +     + + V + G +E SN N   ++  +I   Q + +    I    
Sbjct: 351 WASSYSSGLPLSGAPGSTNLGVLQSGAVEQSNVNLSQDLVNLIVAQQAYQANAQTIKTQN 410

Query: 232 KSMLEAIR 239
             +   + 
Sbjct: 411 TVVQTLLS 418


>gi|157376216|ref|YP_001474816.1| flagellar hook protein FlgE [Shewanella sediminis HAW-EB3]
 gi|157318590|gb|ABV37688.1| flagellar basal body FlaE domain protein [Shewanella sediminis
           HAW-EB3]
          Length = 454

 Score = 83.8 bits (205), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 69/183 (37%), Gaps = 5/183 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61
           SFNI L+   A ++ L+T A+N++N +++GF+  + +F++V       N          +
Sbjct: 2   SFNIALSGIAAAQKDLNTTANNIANVNSIGFKESRAEFADVYANSIFANSKTGVGGGATT 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESP---RGIILTRDGRFKVTDDGSLVSAS 118
                    GS   T   LD A+ G  +F   S    + +  TR G FKV  +  LV + 
Sbjct: 62  SHVAQQFHQGSLQFTNNALDMAINGGGFFVTSSGFSSQDLSYTRAGAFKVDSNSYLVDSQ 121

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178
           G +                       +   +             ++++ G   ++ +   
Sbjct: 122 GNFLQAFEVDKDGNSTSVSLTETKPVRIPDTAGSPKKTENVGIQMNLNAGDGTKDPALFD 181

Query: 179 PNI 181
           P+ 
Sbjct: 182 PSD 184



 Score = 66.0 bits (159), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 13/90 (14%), Positives = 33/90 (36%), Gaps = 5/90 (5%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYE 209
           +A + L      QG  +  N+    ++             +  +++   LE SN +   E
Sbjct: 363 LARVALARFANEQGLTQVGNTSWKASLDSGAALAGEANSGTFGSIRSSALEQSNVDLTTE 422

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +  +I   + F + +  ++ N       ++
Sbjct: 423 LVDLISAQRNFQANSRTLEVNNTLQQTVLQ 452


>gi|206603146|gb|EDZ39626.1| Probable flagellar hook protein FlgE [Leptospirillum sp. Group II
           '5-way CG']
          Length = 457

 Score = 83.8 bits (205), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 65/177 (36%), Gaps = 8/177 (4%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND------IDQK 55
            +S  +  +   A+   +S + +N++N +TVGF+  +  F+ V G             Q 
Sbjct: 4   LSSMYVATSGLNAMGTDMSVIGNNITNLNTVGFKQGRAVFANVYGQTMTGRSNTVNTSQP 63

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSL 114
            S V           GS  ++   LD A++G+ +  + S  G    TR+G   +   G +
Sbjct: 64  GSGVYVDAIQQEFTQGSVQASTNALDLAIQGNGFLTVRSKDGQKFYTRNGELALDKTGRI 123

Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171
           V  S    +    +   +I        V +     +  + + +       M++    
Sbjct: 124 VDTS-NRALQGYMNKNGKIQPILSDIRVPQTTVPPKATQNVFSRINLDAGMTEKLKE 179



 Score = 60.3 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 13/96 (13%), Positives = 30/96 (31%), Gaps = 5/96 (5%)

Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANS 206
            KV+  + + S +   G      +    +I                 +    LE S  + 
Sbjct: 362 QKVLGVVSIASFNNPGGLASVGGNAYIESIASGVPNFGRPGQGGRGALLSNSLELSTTDL 421

Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
             +M  MI   + + +  ++I  +   +   +  I 
Sbjct: 422 GRQMVDMITAERGYQASASIIATDNTILNTLLTRIG 457


>gi|15887919|ref|NP_353600.1| flagellar hook protein FlgE [Agrobacterium tumefaciens str. C58]
 gi|15155515|gb|AAK86385.1| flagellar hook protein [Agrobacterium tumefaciens str. C58]
          Length = 425

 Score = 83.4 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/191 (19%), Positives = 69/191 (36%), Gaps = 3/191 (1%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
              G++   A   +L TV DN++N  T G++     FS +V    +        V S   
Sbjct: 7   MRTGVSGMNAQANKLGTVGDNIANASTTGYKRASTSFSSLVLPSSS-GSYASGGVQSNVR 65

Query: 65  YLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASGKYPV 123
           Y   E G+   T +  D A++G+ +F ++   G    TR G F+   +G L +A+G   +
Sbjct: 66  YSISEQGNLSYTTSSTDLAIQGNGFFVVQDGSGTPYLTRAGSFQKNSEGYLENAAGFQLM 125

Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183
                           F   E   ++  G   +     S   +     +  +   P+   
Sbjct: 126 GYPYGSNPP-AAVVNGFTGLEAINVNNFGLTASPSTQGSFPANLNRDDKAATAPLPSGNS 184

Query: 184 TPLEDLSGVTV 194
                 +  ++
Sbjct: 185 ATAAFGNKTSL 195



 Score = 71.4 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 17/125 (13%), Positives = 37/125 (29%), Gaps = 5/125 (4%)

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
              VL+          +     +          + I  + L +V        +  +   P
Sbjct: 298 GTAVLNGNGPSQIKDVEIGKDGLVTAVYQDGGRRNIYQLALATVPSVDNLTPQNGNVYLP 357

Query: 180 NIPPTP-----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
           +           +  S   +++G LE SN +   E+  MI   + + + + +       M
Sbjct: 358 SNDSGVVTIGFPQSGSFGYIQKGALEGSNVDIASELTDMIESQRIYTANSKVFQTGSDLM 417

Query: 235 LEAIR 239
              I 
Sbjct: 418 DVLIN 422


>gi|291532057|emb|CBK97642.1| fagellar hook-basal body proteins [Eubacterium siraeum 70/3]
          Length = 503

 Score = 83.4 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 23/143 (16%), Positives = 47/143 (32%), Gaps = 10/143 (6%)

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-----IATMGLY 161
                  +V   G   + D      Q  +  +   + E G I     V     +  + + 
Sbjct: 358 SNNFYSDMVELLGNIKMTDGRVAATQTVKDLDSVYINEDGTIYGIHSVHGIIMLGRIDIV 417

Query: 162 SVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
           + D   G  +  +S     +     +     +    +V  G LE SN +   E   MI  
Sbjct: 418 TFDNPNGLEQVGSSYWRETLSSGQPQVNIAGENGSASVVSGALEMSNVDLSQEFSDMIIT 477

Query: 217 TQKFNSITTLIDENEKSMLEAIR 239
            + F + + +I  ++  + E + 
Sbjct: 478 QRGFQANSRIITTSDTMLEEIVN 500



 Score = 74.5 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 46/119 (38%), Gaps = 13/119 (10%)

Query: 19  LSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI------------DQKISFVASGKEYL 66
           +  + +N++N +T GF+T    F EV    K +              Q       G    
Sbjct: 1   MDVIGNNIANVNTTGFKTSVTTFQEVYYQTKKNGSAGSNLQGGVNPSQVGYGTKLGAIGQ 60

Query: 67  SKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYPVL 124
                 F  + +  D AL GD +F +      I  +R G F V + G+LV ++G   + 
Sbjct: 61  VMGQSGFTYSDSVYDCALSGDGFFQVMDEAGNIFYSRAGVFNVDNAGNLVDSNGNMVLG 119


>gi|107023953|ref|YP_622280.1| flagellar hook protein FlgE [Burkholderia cenocepacia AU 1054]
 gi|116691040|ref|YP_836663.1| flagellar hook protein FlgE [Burkholderia cenocepacia HI2424]
 gi|105894142|gb|ABF77307.1| flagellar basal body FlaE [Burkholderia cenocepacia AU 1054]
 gi|116649129|gb|ABK09770.1| flagellar basal body FlaE domain protein [Burkholderia cenocepacia
           HI2424]
          Length = 413

 Score = 83.4 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 63/189 (33%), Gaps = 2/189 (1%)

Query: 8   GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVASGKEY 65
           GL+        L  + +N++N +TVGF++   +F+++           Q           
Sbjct: 6   GLSGLSGASNALDVIGNNIANANTVGFKSSTAQFADMYANSVATSVNTQIGIGTTLNSVQ 65

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125
                G+  +T + LD A+ G+ +F + +      +RDG F+   +G +V+A G   +  
Sbjct: 66  QQFGQGTINTTNSSLDVAINGNGFFQMSNNGVTTYSRDGTFQRDKNGYIVNAQGMNLMGY 125

Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185
           MA     +     +        I+       T             +   +          
Sbjct: 126 MADKNGVLNTAQTVPLQAPTTNIAPTATTKITGQFNLNSQDTVPAKTPFNATDTTTYNYS 185

Query: 186 LEDLSGVTV 194
                  ++
Sbjct: 186 TSIQVYDSL 194



 Score = 65.3 bits (157), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 13/125 (10%), Positives = 36/125 (28%), Gaps = 5/125 (4%)

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                D  +                    + +  V+  + L + +   G V    +  + 
Sbjct: 288 NNLAQDGYASGTLTTYSIGTDGKLTGNYSNGQTAVLGQIALANFNNPNGLVNLGGNQYAE 347

Query: 180 NIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
           +      +       +  T++   LE+SN +   ++  +I   + + +    I   +   
Sbjct: 348 SAASGVPQVSAPGSTNHGTLQGSALENSNVDLTSQLVNLITAQRNYQANAQTIKTQQTVD 407

Query: 235 LEAIR 239
              I 
Sbjct: 408 QTLIN 412


>gi|330899401|gb|EGH30820.1| flagellar hook protein FlgE [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 348

 Score = 83.4 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 52/134 (38%), Gaps = 4/134 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS----FV 59
           SFNIGL+   A  + L    +N++N  T GF++ + +F++             S      
Sbjct: 2   SFNIGLSGLYAANKSLDVTGNNIANVATTGFKSSRAEFADQYAQSIRGTSGNTSVGSGVR 61

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119
            +       +      T   LD A+ GD +F + +    + TR G F    +G +V++S 
Sbjct: 62  TAAVSQQFSQGSLTTGTANSLDLAINGDGFFMMSNNGEKLYTRAGAFHTDKEGYVVNSSN 121

Query: 120 KYPVLDMASVPIQI 133
                        +
Sbjct: 122 MKLQGYNVDANGSV 135


>gi|302878276|ref|YP_003846840.1| fagellar hook-basal body protein [Gallionella capsiferriformans
           ES-2]
 gi|302581065|gb|ADL55076.1| fagellar hook-basal body protein [Gallionella capsiferriformans
           ES-2]
          Length = 498

 Score = 83.4 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 59/133 (44%), Gaps = 3/133 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG- 62
           SF  GL+      + L T+ +N++N  TVGF+  + +F+++  A  +          +  
Sbjct: 2   SFQQGLSGLNGASRHLDTIGNNVANASTVGFKQSQAQFADMFAASLSGSGAMPIGTGTKL 61

Query: 63  -KEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGK 120
                    G+  +T   LD A+ G  +F L      ++ +R+G+F+V   G++V+  G 
Sbjct: 62  VAVAQQFTQGNITNTNNPLDTAISGQGFFRLTDAAGAVLYSRNGQFQVDKTGNVVNNQGH 121

Query: 121 YPVLDMASVPIQI 133
                +A     I
Sbjct: 122 IVSGYLADAAGTI 134



 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 30/98 (30%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFL-----ED 201
             + + + +  + L +    QG     N+              +  +   G L     ED
Sbjct: 399 YSNGQSRALGQITLTNFINPQGLQPVGNNEWVETSASGSPTTGTPGSSSLGMLQASATED 458

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E+  MI   + + +    I   +  +     
Sbjct: 459 SNVDLTAELVNMITAQRVYQANAQTIKTQDSLLQTITS 496


>gi|78062976|ref|YP_372884.1| flagellar hook protein FlgE [Burkholderia sp. 383]
 gi|77970861|gb|ABB12240.1| conserved hypothetical protein [Burkholderia sp. 383]
          Length = 414

 Score = 83.4 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 62/189 (32%), Gaps = 2/189 (1%)

Query: 8   GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGKEY 65
           GL+        L  + +N++N +TVGF+  +  F+++       +   Q           
Sbjct: 6   GLSGLAGAANHLDVIGNNIANANTVGFKQGRANFADMYANSVATSTNTQIGIGTRLVSVQ 65

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125
                G+  ST + LD A+ G+ +F + +      +RDG F     G++V A  +  +  
Sbjct: 66  QQFGQGTINSTKSSLDIAINGNGFFQMSNNGVTTYSRDGVFHRDKSGAIVDAQNRNLMGY 125

Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185
            A     I     +        IS +     T         +   +   +          
Sbjct: 126 AAGPGGAINTAATVPLQAPTSNISPQATTKITGQFNLNSQDKVPAKTPFNAGDNTTYNYN 185

Query: 186 LEDLSGVTV 194
                  ++
Sbjct: 186 SSIQVYDSL 194



 Score = 65.3 bits (157), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 11/98 (11%), Positives = 31/98 (31%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLED 201
             + +  V+  + L + +   G      +           +       +  T++   LE+
Sbjct: 315 YSNGQSAVLGLIALANFNNPNGLENIGGNQYVETAASGVPQISAPGSTNHGTLQGSALEN 374

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E+  +I   + + +    I   +      + 
Sbjct: 375 SNVDLTTELVNLIKAQRDYQANAQTIKTQQTVDQTLLN 412


>gi|149188066|ref|ZP_01866361.1| flagellar hook protein E [Vibrio shilonii AK1]
 gi|148838054|gb|EDL54996.1| flagellar hook protein E [Vibrio shilonii AK1]
          Length = 432

 Score = 83.4 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 66/171 (38%), Gaps = 6/171 (3%)

Query: 6   NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGK 63
            + L+   A +  L+T ++N++N +T GF+  + +F +V       N            K
Sbjct: 3   YVSLSGLSAAQLDLNTTSNNIANANTFGFKESRAEFGDVYSNSLFTNAKTTPGGGAQPSK 62

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALES----PRGIILTRDGRFKVTDDGSLVSASG 119
                  GS IST   +D  + G  +FA+      P+   LTR+G F +  D  +V+++ 
Sbjct: 63  IAQQFHEGSSISTNNPMDLRISGTGFFAVSKDRLVPQQNELTRNGAFHLNKDSYMVTSND 122

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170
           ++ +    +         E   +    E  +  +        ++  +    
Sbjct: 123 EFLLGYEVNKDTNEVVSYEPRPINIPPEFGKPKQTANIEIGVNLPANGDLK 173



 Score = 66.8 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 18/143 (12%), Positives = 43/143 (30%), Gaps = 6/143 (4%)

Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ-KGKVIATMGLY 161
              F +       +        +  +    + + D        G  S  +   +  + + 
Sbjct: 288 TLSFSLDSATQFAAPFELTKFQEDGATTGFLTKVDFDEQGNVLGTYSNGENVTLGRVAMV 347

Query: 162 SVDMSQGFVRRENSGISPNIP-----PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
            V   QG  ++  +                   S  T+  G LE SN +   E+  +I  
Sbjct: 348 RVANEQGLDKKGGTQWDSTTASGAKIWGESNKGSFGTINNGTLEQSNIDMTQELVDLISA 407

Query: 217 TQKFNSITTLIDENEKSMLEAIR 239
            + F + +  +D + +     ++
Sbjct: 408 QRNFQANSRALDVHNQLQQNILQ 430


>gi|302874597|ref|YP_003843230.1| fagellar hook-basal body protein [Clostridium cellulovorans 743B]
 gi|307690792|ref|ZP_07633238.1| fagellar hook-basal body protein [Clostridium cellulovorans 743B]
 gi|302577454|gb|ADL51466.1| fagellar hook-basal body protein [Clostridium cellulovorans 743B]
          Length = 474

 Score = 83.4 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 59/165 (35%), Gaps = 36/165 (21%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS--- 57
           M      G+    A + +L  + +N++N  T  F++  ++F++ +               
Sbjct: 1   MIKGMYSGITGLKANQTKLDVIGNNIANVGTTAFKSSSIRFTDSLYQNMTSASAPGYNLG 60

Query: 58  ---------FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE--------------- 93
                     V       +   G+  +TG+ LD A++GD +F +                
Sbjct: 61  GTNPSVVGLGVKVSAVTTNMTQGNLQNTGSNLDCAIDGDGFFMVATGPLPTGNEFGVTLD 120

Query: 94  ---------SPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASV 129
                    +  G+  TRDG F +  DG+L+S SG   +      
Sbjct: 121 TLSHSIINGNGMGVNYTRDGSFSLDADGNLLSNSGYRILGYPLQE 165



 Score = 69.9 bits (169), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 12/99 (12%), Positives = 39/99 (39%), Gaps = 13/99 (13%)

Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPL-------------EDLSGVTVKRGFLE 200
           V+  + + +   + G  +  N+  + +                    + +  +   G +E
Sbjct: 373 VLGQLAMSTFKNTVGLQKLGNNLYNVSANSGEPIIRSSVGTEKDRSNEDAFGSCVNGVVE 432

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            SN +   +  +MI  ++ F + + +I  +++ + E ++
Sbjct: 433 MSNVDLAEQFTEMIVASRAFQANSKIITTSDEILQELVQ 471


>gi|157738166|ref|YP_001490850.1| flagellar hook protein FlgE [Arcobacter butzleri RM4018]
 gi|157700020|gb|ABV68180.1| flagellar hook protein FlgE [Arcobacter butzleri RM4018]
          Length = 583

 Score = 83.4 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 58/125 (46%), Gaps = 5/125 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M ++   G++     ++ +S  ++N++N+ T G +  ++ F++++             V+
Sbjct: 1   MISALWNGVSGISNYDKGISVESNNIANSSTTGHKLDEITFADMLYTNSG----YGKGVS 56

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASG 119
           +         GS  S+G  LD A++G  +F + +    I  TR G F+ T DG L +  G
Sbjct: 57  TQSISKQFAQGSINSSGGTLDMAIDGKGFFIVSDKAGEIYYTRAGDFQQTKDGWLQTQDG 116

Query: 120 KYPVL 124
              + 
Sbjct: 117 MNVLG 121



 Score = 63.0 bits (151), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/243 (11%), Positives = 69/243 (28%), Gaps = 15/243 (6%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           QTS+N    A  A +     +++      T G+        + V  +++ I  K   +  
Sbjct: 346 QTSYNTAKNAISAYKDLADKISN------TAGY---SASVKDGVLTVESLIAGKSFNITD 396

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-----ILTRDGRFKVTDDGSLVS 116
            K   +    +              D+                L      +  + GS  +
Sbjct: 397 AKLNDTGVNATVSQEAVTGSGMAMVDSAKDALKEAVEKAGGKFLEITNVMEYANLGSYGT 456

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS- 175
           +     +  +  V     +     +            ++  +   +    QG     ++ 
Sbjct: 457 SDLNLRLDTLGLVEGDFGEASVSDDGFVFVTSGDNKFLVGRVSTAAFRNEQGLEAVGDNK 516

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
             +     T         +K   LE SN +    +  ++   + + + +  I  ++  + 
Sbjct: 517 YSATKSSGTAYNADGMNKIKEKSLERSNVSYSSTLTSLMVYQRAYEASSKSITTSDDFLK 576

Query: 236 EAI 238
            AI
Sbjct: 577 TAI 579


>gi|312879592|ref|ZP_07739392.1| flagellar basal body rod protein [Aminomonas paucivorans DSM 12260]
 gi|310782883|gb|EFQ23281.1| flagellar basal body rod protein [Aminomonas paucivorans DSM 12260]
          Length = 136

 Score = 83.4 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 36/104 (34%), Gaps = 14/104 (13%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-------- 52
           M  S   G++     +  L  + +N++N +T GF+   V F +++               
Sbjct: 1   MLRSLYSGVSGVKGHQTYLDVIGNNIANVNTTGFKKSNVLFQDLLYQSNRGAMAPNSDAG 60

Query: 53  ------DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF 90
                  Q    V           G    TG   D A++GD +F
Sbjct: 61  RGGINPMQVGLGVNIAAIETIHTQGPMQYTGNRNDMAIQGDGYF 104


>gi|237653583|ref|YP_002889897.1| flagellar basal body FlaE domain protein [Thauera sp. MZ1T]
 gi|237624830|gb|ACR01520.1| flagellar basal body FlaE domain protein [Thauera sp. MZ1T]
          Length = 450

 Score = 83.4 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 69/190 (36%), Gaps = 8/190 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND---IDQKISFVA 60
           SF  GL+      + L  +++N++NT+T+GF+T    FS+V  A         Q      
Sbjct: 2   SFQQGLSGLSVSSKALDIISNNVANTNTIGFKTGSAIFSDVFAASLTGSISGKQVGVGAT 61

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
            G    +   G+  +T   LD A+ GD +F +       + TR+G+F++  +G + + +G
Sbjct: 62  LGAVRQTFTQGNLTTTNNPLDLAINGDGFFVVSRENGPDVYTRNGQFELDKEGFIRTPTG 121

Query: 120 ----KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
                +                +   V   G        +   G    +      R    
Sbjct: 122 ERLKGFQSPVTPGALPTPIGGLKDVQVPIVGSQPMPTSRVEIGGNLDANDLSAAQRYPQL 181

Query: 176 GISPNIPPTP 185
             S    P P
Sbjct: 182 FGSTFTFPLP 191



 Score = 71.1 bits (172), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 34/98 (34%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP-----PTPLEDLSGVTVKRGFLED 201
             + + + +A + L +       +   N+            P+   +     V  G +ED
Sbjct: 351 YTNGETRELAQLALQTFRNPNALLSIGNNFWEATTESGLTAPSKAGEGVAGVVSAGMIED 410

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +N     E+ QMI   + + +    I   ++ +   + 
Sbjct: 411 ANVELTNELVQMIVQQRNYQANAQSIKAQDQVLQTLVN 448


>gi|170734374|ref|YP_001766321.1| flagellar hook protein FlgE [Burkholderia cenocepacia MC0-3]
 gi|254246965|ref|ZP_04940286.1| Flagellar hook protein FlgE [Burkholderia cenocepacia PC184]
 gi|124871741|gb|EAY63457.1| Flagellar hook protein FlgE [Burkholderia cenocepacia PC184]
 gi|169817616|gb|ACA92199.1| flagellar basal body FlaE domain protein [Burkholderia cenocepacia
           MC0-3]
          Length = 413

 Score = 83.4 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 63/189 (33%), Gaps = 2/189 (1%)

Query: 8   GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVASGKEY 65
           GL+        L  + +N++N +TVGF++   +F+++           Q           
Sbjct: 6   GLSGLSGASNALDVIGNNIANANTVGFKSSTAQFADMYANSVATSVNTQIGIGTTLNSVQ 65

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125
                G+  +T + LD A+ G+ +F + +      +RDG F+   +G +V+A G   +  
Sbjct: 66  QQFGQGTINTTNSSLDVAINGNGFFQMSNNGVTTYSRDGTFQRDKNGYIVNAQGMNLMGY 125

Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185
           MA     +     +        I+       T             +   +          
Sbjct: 126 MADKNGVLNTAQTVPLQAPTTNIAPTATTKITGQFNLNSQDTVPAKTPFNAADTTTYNYS 185

Query: 186 LEDLSGVTV 194
                  ++
Sbjct: 186 TSIQVYDSL 194



 Score = 65.7 bits (158), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 13/125 (10%), Positives = 36/125 (28%), Gaps = 5/125 (4%)

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                D  +                    + +  V+  + L + +   G V    +  + 
Sbjct: 288 NNLAQDGYASGTLTTYSIGTDGKLTGNYSNGQTAVLGQIALANFNNPNGLVNLGGNQYAE 347

Query: 180 NIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
           +      +       +  T++   LE+SN +   ++  +I   + + +    I   +   
Sbjct: 348 SAASGVPQVSAPGSTNHGTLQGSALENSNVDLTSQLVNLITAQRNYQANAQTIKTQQTVD 407

Query: 235 LEAIR 239
              I 
Sbjct: 408 QTLIN 412


>gi|323498420|ref|ZP_08103416.1| flagellar hook protein FlgE [Vibrio sinaloensis DSM 21326]
 gi|323316493|gb|EGA69508.1| flagellar hook protein FlgE [Vibrio sinaloensis DSM 21326]
          Length = 438

 Score = 83.4 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 57/132 (43%), Gaps = 6/132 (4%)

Query: 6   NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGK 63
            + L+   A +  L+T ++N++N +T GF+  + +F +V       N        V + K
Sbjct: 3   YVALSGISAAQLDLNTTSNNIANANTYGFKESRAEFGDVYSNSLFTNAKTTPGGGVQAAK 62

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWF----ALESPRGIILTRDGRFKVTDDGSLVSASG 119
                  GS + T   +D  + G  +F       +P    LTR+G F +  D  +V+A+ 
Sbjct: 63  VAQQFHEGSSVYTNNPMDLRISGTGFFAVAKDRLTPTTNELTRNGAFHLNKDNYMVTAND 122

Query: 120 KYPVLDMASVPI 131
           ++ +    +   
Sbjct: 123 EFLLGYQVNGDT 134



 Score = 67.2 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 12/98 (12%), Positives = 35/98 (35%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI-----PPTPLEDLSGVTVKRGFLED 201
             + +   +  + +  V   QG  ++  +                   S  ++  G LE 
Sbjct: 339 YSNGENITLGRVAMVRVANEQGLDKKGGTQWDSTQFSGDKIWGESNKGSFGSINSGTLEQ 398

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E+  +I   + F + +  ++ + ++    ++
Sbjct: 399 SNIDMTQELVDLITAQRNFQANSRSLEVHNQTQQNILQ 436


>gi|119947177|ref|YP_944857.1| flagellar hook protein FlgE [Psychromonas ingrahamii 37]
 gi|119865781|gb|ABM05258.1| flagellar hook protein FlgE [Psychromonas ingrahamii 37]
          Length = 398

 Score = 83.4 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 6/132 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SFNI ++   A  ++L+T+++N++N  T GF+  + +F+ +      +  Q      SG 
Sbjct: 2   SFNIAISGLNATNKQLNTISNNIANVSTYGFKESRAEFASIY-----NGGQAGGVEVSGI 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122
                  GS  +TG  LD A+ G+ +FA    +   I TR G F    D  +VS++G   
Sbjct: 57  TQNFDRNGSLEATGRALDLAISGNGFFATVDNKGQQIYTRSGAFSTDKDNFIVSSAGNKL 116

Query: 123 VLDMASVPIQIP 134
                     + 
Sbjct: 117 QGYTVDAKANLQ 128



 Score = 69.1 bits (167), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 9/105 (8%), Positives = 30/105 (28%), Gaps = 5/105 (4%)

Query: 142 VGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKR 196
           +      + + ++   + L          +  N+              +  +     +  
Sbjct: 294 MIFAQFTNGQSQLQGQLVLADFPNPTALEQSNNTSWMQTFGSGTPVKGAPGSGVLGKLTS 353

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
             LE SN +   E+  ++   + + + T  I   ++        +
Sbjct: 354 NMLETSNVDLTSELVSLMTAQRNYQANTKTISTADQLTKALFNAV 398


>gi|212639558|ref|YP_002316078.1| flagellar hook protein FlgE [Anoxybacillus flavithermus WK1]
 gi|212561038|gb|ACJ34093.1| Flagellar hook protein FlgE [Anoxybacillus flavithermus WK1]
          Length = 460

 Score = 83.4 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 48/135 (35%), Gaps = 7/135 (5%)

Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
           +   T     ++A GK   +D         Q          G     G        +   
Sbjct: 330 QIPKTAKSFGITADGKVTFIDSNGQLKIAGQILLAQFPNPTGLEKMGGNT------FKET 383

Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224
            + G + R  +G++ N    P  + +   +  G LE SN +   E  +MI   + F + T
Sbjct: 384 NNSGKLDRNANGLTINELSRPGLNGA-GEIISGALEMSNVDLSEEFTEMIVAQRGFQANT 442

Query: 225 TLIDENEKSMLEAIR 239
            +I  +++ + E + 
Sbjct: 443 RIITTSDEILQELVN 457



 Score = 79.5 bits (194), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 32/167 (19%), Positives = 59/167 (35%), Gaps = 41/167 (24%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50
           M  S   G+      + +L  + +N+SN +T G++  +V F ++V    +          
Sbjct: 1   MLRSMFTGIGGIRNFQYKLDVIGNNISNVNTYGYKKARVTFKDLVSQQISAATSSTGTRG 60

Query: 51  --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF------------------ 90
             +  Q       G        GS  +T   LD AL GD +F                  
Sbjct: 61  GINGKQIGLGSGLGSIETIHTQGSTQTTSRPLDLALGGDGFFVVGSINDVTLISMDGPAG 120

Query: 91  -----------ALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDM 126
                       ++    +  TR G F + + G +V++ G+Y + + 
Sbjct: 121 KLGTNKVNTGVPIDRVFNLSFTRAGNFYLDEYGYIVNSDGQYLIGEA 167


>gi|330943207|gb|EGH45614.1| flagellar hook protein FlgE [Pseudomonas syringae pv. pisi str.
           1704B]
          Length = 368

 Score = 83.4 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 52/134 (38%), Gaps = 4/134 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS----FV 59
           SFNIGL+   A  + L    +N++N  T GF++ + +F++             S      
Sbjct: 2   SFNIGLSGLYAANKSLDVTGNNIANVATTGFKSSRAEFADQYAQSIRGTSGNTSVGSGVT 61

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119
            +       +      T   LD A+ GD +F + +    + TR G F    +G +V++S 
Sbjct: 62  TAAVSQQFSQGSLTTGTANSLDLAINGDGFFMMSNNGEKLYTRAGAFHTDKEGYVVNSSN 121

Query: 120 KYPVLDMASVPIQI 133
                        +
Sbjct: 122 MKLQGYNVDANGSV 135


>gi|330893050|gb|EGH25711.1| flagellar hook protein FlgE [Pseudomonas syringae pv. mori str.
           301020]
          Length = 165

 Score = 83.4 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 58/133 (43%), Gaps = 3/133 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF---VA 60
           SFN  ++   A  +RL    +N++N+ T+GF++ + +FS +  A +    +         
Sbjct: 2   SFNTAISGIHAANKRLEVAGNNIANSGTIGFKSSRAQFSALYSASQLGSGRNAVGDGVCL 61

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           +  +    +  S  ++G  LD  ++G+ +F +     +  TR G F       +V + G 
Sbjct: 62  ASMQQNFNQGESMTTSGNPLDMRIQGNGFFVVSDGGSLAYTRAGAFLKDAANFVVDSEGG 121

Query: 121 YPVLDMASVPIQI 133
                 A+   +I
Sbjct: 122 RLQGYAANEQGEI 134


>gi|237810461|ref|YP_002894912.1| flagellar hook protein FlgE [Burkholderia pseudomallei MSHR346]
 gi|237503327|gb|ACQ95645.1| flagellar hook protein FlgE [Burkholderia pseudomallei MSHR346]
          Length = 413

 Score = 83.4 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 65/201 (32%), Gaps = 6/201 (2%)

Query: 8   GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVASGKEY 65
           GL+  +     L  + +N++N +TVGF+    +FS++          +            
Sbjct: 6   GLSGLVGASSDLDVIGNNIANANTVGFKGSTAQFSDMYANSVASAVNNPIGIGTMLASVQ 65

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125
                G+  S+ + L+ A+ G+ +F + +      +RDG F+   +G +V++ G   +  
Sbjct: 66  QQFSQGTITSSTSSLNVAINGNGFFQMSNNGVTTYSRDGTFQRDKNGYIVNSQGLNLMGY 125

Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185
            A+    I     +        I+       T                 +   P      
Sbjct: 126 AANANGVINTAATVPLQAPTTNIAPTATTKITGQFNLNSQDAVPATTPFNYTDPTSYNYT 185

Query: 186 LEDLSGVTVKRGFLEDSNANS 206
                  T+        N N 
Sbjct: 186 TSVQVFDTLGGSQ----NVNL 202



 Score = 64.5 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 12/98 (12%), Positives = 34/98 (34%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLED 201
             + +   +  + L + +   G V   N+    +      +       +  T++   LE+
Sbjct: 315 YSNGQTSTLGQIVLANFNNPNGLVNVGNNQYVESAASGVPQISAPGSTNHGTLQGSALEN 374

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   ++ ++I   + + +    I   +      I 
Sbjct: 375 SNVDLTSQLVKLITAQRNYQANAQTIKTQQTVDQTLIN 412


>gi|134095097|ref|YP_001100172.1| flagellar hook protein FlgE [Herminiimonas arsenicoxydans]
 gi|133739000|emb|CAL62048.1| Flagellar hook protein FlgE [Herminiimonas arsenicoxydans]
          Length = 418

 Score = 83.4 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 64/132 (48%), Gaps = 2/132 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID--QKISFVAS 61
           SF  GL+   A  + L  + +N++N+ TVGF+  +V+F+++  +  +     Q       
Sbjct: 2   SFQQGLSGLNAASKSLEAIGNNVANSGTVGFKQSQVQFADIYASTLSGSGAAQIGIGTQI 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
            +       G+  ++   LD A+ GD +F + S   I   R+G+F+++ +G + SASG  
Sbjct: 62  ARVAQLFSQGNITASNNPLDMAINGDGFFRMSSGGTISYARNGQFELSKEGFIQSASGAR 121

Query: 122 PVLDMASVPIQI 133
               MA     +
Sbjct: 122 LTGYMADANGVV 133



 Score = 78.0 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 19/158 (12%), Positives = 44/158 (27%), Gaps = 8/158 (5%)

Query: 90  FALESPRGIILTRDGRFKVTDDGSLV--SASGKYPVLDMASVPIQIPQKDEIFNVGEKGE 147
             +        T      +   G+     + G    L     P  +   +   +    G 
Sbjct: 259 LVVPMDVSTGATTPFNIVIDHTGTQQFAQSFGVNKQLPDGFPPGTLTAFNVASDGSIVGR 318

Query: 148 ISQKG-KVIATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLED 201
            S     V+  + L S     G     ++             +        +V+   +E+
Sbjct: 319 YSNGKVNVLGQVILSSFANPNGLQNIGDNQWVETAESGVALTSAPGSSGLGSVQSARIEE 378

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E+  MI   + + +    I   ++ +   + 
Sbjct: 379 SNVDLTAELVNMITAQRYYQANAQTIKTQDQILQTLVN 416


>gi|294140185|ref|YP_003556163.1| flagellar hook protein FlgE [Shewanella violacea DSS12]
 gi|293326654|dbj|BAJ01385.1| flagellar hook protein FlgE [Shewanella violacea DSS12]
          Length = 453

 Score = 83.0 bits (203), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 36/125 (28%), Positives = 57/125 (45%), Gaps = 5/125 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61
           SFNI L+   A ++ L+T A+N++N +++GF+  + +FS+V       N        V +
Sbjct: 2   SFNIALSGIAAAQKDLNTTANNIANVNSIGFKESRAEFSDVYANSIFSNSKTAVGGGVTT 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALE---SPRGIILTRDGRFKVTDDGSLVSAS 118
            +       GS   T   LD A+ G  +F      S +    TR G FKV     LV + 
Sbjct: 62  SQVAQQFHQGSMQFTNNALDMAINGGGFFVTSSDLSGKEQSFTRAGAFKVDSSNYLVDSQ 121

Query: 119 GKYPV 123
           G +  
Sbjct: 122 GNFLQ 126



 Score = 65.7 bits (158), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 15/137 (10%), Positives = 39/137 (28%), Gaps = 5/137 (3%)

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
                   +        D  +V      +     +      +     +A + L      Q
Sbjct: 315 NNPTQYASTFEVTELNQDGTTVGRLTNVEVGADGLINASYSNGTTVALARVALARFANEQ 374

Query: 168 GFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222
           G  +  N+    +              +  +++   LE SN +   E+  +I   + F +
Sbjct: 375 GLTQVGNTSWKASQDSGLALAGEANTGTFGSIRSSALEQSNVDLTTELVDLISAQRNFQA 434

Query: 223 ITTLIDENEKSMLEAIR 239
            +  ++ N       ++
Sbjct: 435 NSRTLEVNNTLQQTILQ 451


>gi|94266588|ref|ZP_01290271.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|93452783|gb|EAT03318.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
          Length = 619

 Score = 83.0 bits (203), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 26/205 (12%), Positives = 65/205 (31%), Gaps = 10/205 (4%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
                G++   ++   ++ + DN++N +T  +++ +  F  ++ + +    +  +     
Sbjct: 5   NMIFNGVSGLNSMSGNMAVMGDNIANVNTTSYKSSQASFQNILTSSQERFGEIGNGSQVA 64

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALESP--RGIILTRDGRF-------KVTDDGS 113
               +   G   +T    D A+ G  +F + +P    ++ TRDG+F             +
Sbjct: 65  AITKNFRPGDLETTNQSTDMAISGKGFFMVNNPLADEMLYTRDGQFKLEKSAITPEGFYN 124

Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRE 173
           L + +G        +         +I         +     +A                 
Sbjct: 125 LATPAGHLVQGRNLAANGGADNLGDILIQEVSDPRATGNVSLAMNLQSKPGREDA-QPLH 183

Query: 174 NSGISPNIPPTPLEDLSGVTVKRGF 198
            S       P   +     T+ + F
Sbjct: 184 TSWNGAAAEPLAADRYDYRTIIQAF 208



 Score = 68.4 bits (165), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 20/145 (13%), Positives = 40/145 (27%), Gaps = 6/145 (4%)

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-IATMG 159
           +R    +     +  +AS              +       +    G  S +  V  A + 
Sbjct: 473 SRGDDLQPLRTTNYATASATLSQQQDGFGEGYLQDISVKPDGTMVGRYSNQQSVEQAQVM 532

Query: 160 LYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMI 214
           L      +G     ++                 + S   V    LE SN +   E   +I
Sbjct: 533 LADFADYRGLEPTSHNAYKATAMAGEPTIGVAGEGSFGKVLGNTLEGSNVDLGREFSDLI 592

Query: 215 HLTQKFNSITTLIDENEKSMLEAIR 239
              + F + +  I   ++     +R
Sbjct: 593 MTQRIFQANSKSITTADEVFDTLMR 617


>gi|269961599|ref|ZP_06175961.1| flagellar hook protein [Vibrio harveyi 1DA3]
 gi|269833640|gb|EEZ87737.1| flagellar hook protein [Vibrio harveyi 1DA3]
          Length = 437

 Score = 83.0 bits (203), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 72/200 (36%), Gaps = 7/200 (3%)

Query: 6   NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGK 63
            + L+   + +  L+T ++N++N +T GF+  + +FS+V       N          + +
Sbjct: 3   YVSLSGLSSAQLDLNTTSNNIANANTYGFKESRAEFSDVYSNSLFTNAKTTPGGGAQANQ 62

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWF----ALESPRGIILTRDGRFKVTDDGSLVSASG 119
                  GS I T   +D  + G  +F        P+   +TR+G F +  D  +V+A+ 
Sbjct: 63  VAQQFHEGSSIYTNNPMDLRVSGTGFFAVAKDRLIPQQNEMTRNGAFHLNKDNYMVTAND 122

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV-RRENSGIS 178
           ++ +    +         E   +    E  +  +        ++  +       +     
Sbjct: 123 EFLLGYQVNPESGEVSSYEPQPINIPAEFGKPKQTANIEVGVNLPANGDLKDPTQFDFSD 182

Query: 179 PNIPPTPLEDLSGVTVKRGF 198
           P+            ++ + +
Sbjct: 183 PDTYNRSTSSTIYDSMGQSY 202



 Score = 66.4 bits (160), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 34/98 (34%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI-----PPTPLEDLSGVTVKRGFLED 201
             + +   +  + L  V   QG  ++  +                   S  T+  G LE 
Sbjct: 338 YSNGENVTLGRVALVRVPNEQGLDKKGGTQWDSTQFSGDKIWGESNKGSFGTINNGMLEQ 397

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E+  +I   + F + +  ++ + +     ++
Sbjct: 398 SNIDMTQELVDLISAQRNFQANSRALEVHNQLQQNILQ 435


>gi|167945179|ref|ZP_02532253.1| hypothetical protein Epers_01140 [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 126

 Score = 83.0 bits (203), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 33/98 (33%), Gaps = 5/98 (5%)

Query: 149 SQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSN 203
           +     I  + L      QG     ++    +     +        S  T+ +G LE SN
Sbjct: 29  NTDPTQIGQIELAYFANPQGLEPIGDNLFRESAASGGVNTAIPGSDSTGTLMQGALESSN 88

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
            N + E+  MI   + +   +  I   ++ +      +
Sbjct: 89  VNVVEELVNMIETQRAYEMNSKAISTTDEMLSYINNQL 126


>gi|153834474|ref|ZP_01987141.1| FlgE [Vibrio harveyi HY01]
 gi|156973586|ref|YP_001444493.1| flagellar hook protein FlgE [Vibrio harveyi ATCC BAA-1116]
 gi|148869170|gb|EDL68202.1| FlgE [Vibrio harveyi HY01]
 gi|156525180|gb|ABU70266.1| hypothetical protein VIBHAR_01289 [Vibrio harveyi ATCC BAA-1116]
          Length = 437

 Score = 83.0 bits (203), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 72/200 (36%), Gaps = 7/200 (3%)

Query: 6   NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGK 63
            + L+   + +  L+T ++N++N +T GF+  + +FS+V       N          + +
Sbjct: 3   YVSLSGLSSAQLDLNTTSNNIANANTYGFKESRAEFSDVYSNSLFTNAKTTPGGGAQANQ 62

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWF----ALESPRGIILTRDGRFKVTDDGSLVSASG 119
                  GS I T   +D  + G  +F        P+   +TR+G F +  D  +V+A+ 
Sbjct: 63  VAQQFHEGSSIYTNNPMDLRVSGTGFFAVAKDRLIPQQNEMTRNGAFHLNKDNYMVTAND 122

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV-RRENSGIS 178
           ++ +    +         E   +    E  +  +        ++  +       +     
Sbjct: 123 EFLLGYQVNPESGEVSSYEPQPINIPAEFGKPKQTANIEVGVNLPANGDLKDPTQFDFSD 182

Query: 179 PNIPPTPLEDLSGVTVKRGF 198
           P+            ++ + +
Sbjct: 183 PDTYNRSTSSTIYDSMGQSY 202



 Score = 66.4 bits (160), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 34/98 (34%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI-----PPTPLEDLSGVTVKRGFLED 201
             + +   +  + L  V   QG  ++  +                   S  T+  G LE 
Sbjct: 338 YSNGENVTLGRVALVRVPNEQGLDKKGGTQWDSTQFSGDKIWGESNKGSFGTINNGMLEQ 397

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E+  +I   + F + +  ++ + +     ++
Sbjct: 398 SNIDMTQELVDLISAQRNFQANSRALEVHNQLQQNILQ 435


>gi|313144034|ref|ZP_07806227.1| flagellar hook protein FlgE [Helicobacter cinaedi CCUG 18818]
 gi|313129065|gb|EFR46682.1| flagellar hook protein FlgE [Helicobacter cinaedi CCUG 18818]
          Length = 707

 Score = 83.0 bits (203), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 58/168 (34%), Gaps = 15/168 (8%)

Query: 12  QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-------------KNDIDQKISF 58
             A +  L   ++N++N +TVGF+  +  F +++  I               +       
Sbjct: 1   MQAHQIALDVESNNIANVNTVGFKYSRASFVDMLSQIKLIATSPYKNGLGGQNDFSIGLG 60

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGRFKVTDDGSLVS 116
           V           G+  +T  + D A+EGD +F +   RG     TR+G F    +G+LV+
Sbjct: 61  VGIDATTKVFSQGNTQNTDVKTDIAIEGDGFFIISPDRGTTHNYTRNGEFLFDANGNLVT 120

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
             G      +                  + + +   + I       + 
Sbjct: 121 TGGYVVQGWVRPPLEAAESGTMSDFDFFRVDNTGPVRNIQIDPGMVMP 168



 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 14/128 (10%), Positives = 41/128 (32%), Gaps = 5/128 (3%)

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           +       +       +  + +          + +   +A + L +   + G      + 
Sbjct: 577 SETYAINQNGYQAGDLMDIRFDSNGSLLGAFSNGRSIALAQVALANFANNTGLQAEGGNV 636

Query: 177 ISPNIPPTPLEDLSGVTVKRG-----FLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
            S           +  T +RG      LE SN +    + Q+I + + F + +  +  ++
Sbjct: 637 FSQTGNSGEPMIGAANTGRRGGVSGSKLEMSNVDLSRSLTQLIVVQRGFQANSKAVTTSD 696

Query: 232 KSMLEAIR 239
           + +   + 
Sbjct: 697 QILNTLLN 704


>gi|309788146|ref|ZP_07682752.1| flagellar basal-body rod flgG domain protein [Shigella
          dysenteriae 1617]
 gi|308923998|gb|EFP69499.1| flagellar basal-body rod flgG domain protein [Shigella
          dysenteriae 1617]
          Length = 82

 Score = 83.0 bits (203), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 24/56 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56
          M +S  I      A +  +  +A+N++N  T GF+  +  F +++         + 
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQS 56


>gi|27381969|ref|NP_773498.1| flagellar hook protein FlgE [Bradyrhizobium japonicum USDA 110]
 gi|27355139|dbj|BAC52123.1| flagellar hook protein [Bradyrhizobium japonicum USDA 110]
          Length = 410

 Score = 83.0 bits (203), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/194 (19%), Positives = 72/194 (37%), Gaps = 4/194 (2%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
              G++   A   +LSTV+DN++N +T G++    +FS ++    +  +     V +   
Sbjct: 7   MRTGVSGMSAQSNKLSTVSDNIANVNTTGYKRASTEFSSLILKSGSG-NYDSGAVETTVR 65

Query: 65  YLSKEVGSFISTGTELDFALEGDAWFALESPRGI--ILTRDGRFKVTDDGSLVSASGKYP 122
           Y   + G    T +  D A++G+ +F + +       LTR G F     G+LV+A+G Y 
Sbjct: 66  YAISDAGHTQFTTSTTDLAVQGNGFFVVSNANNTQQYLTRAGSFVPDAQGNLVNAAGYYL 125

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
            L          Q               +  V +T G  +                P   
Sbjct: 126 -LGQPGKVTNFSQNSLSGMQIVNIAQVSQVPVPSTAGTLTTGNLDPKAAVIAGPPGPASY 184

Query: 183 PTPLEDLSGVTVKR 196
            +    ++   + +
Sbjct: 185 SSKSSIVAYNNIGQ 198



 Score = 68.0 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 16/94 (17%), Positives = 31/94 (32%), Gaps = 5/94 (5%)

Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNAN 205
           +   + T+ L  V           +  S N+     +          T++ G LEDSN +
Sbjct: 314 QQMTLYTIMLADVPSPDNLTPEPGNVYSTNMNSGNAQAGNAGTGGLGTIQSGALEDSNVD 373

Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              E+  MI   + F + +         +   + 
Sbjct: 374 LADELTGMIEAQRGFTANSKSFQTGADLLDVVVN 407


>gi|53717914|ref|YP_106900.1| flagellar hook protein FlgE [Burkholderia pseudomallei K96243]
 gi|53724565|ref|YP_104798.1| flagellar hook protein FlgE [Burkholderia mallei ATCC 23344]
 gi|67641538|ref|ZP_00440315.1| flagellar hook protein FlgE [Burkholderia mallei GB8 horse 4]
 gi|76810959|ref|YP_331879.1| flagellar hook protein FlgE [Burkholderia pseudomallei 1710b]
 gi|121599135|ref|YP_994291.1| flagellar hook protein FlgE [Burkholderia mallei SAVP1]
 gi|124384593|ref|YP_001028060.1| flagellar hook protein FlgE [Burkholderia mallei NCTC 10229]
 gi|126449658|ref|YP_001082867.1| flagellar hook protein FlgE [Burkholderia mallei NCTC 10247]
 gi|126453793|ref|YP_001064564.1| flagellar hook protein FlgE [Burkholderia pseudomallei 1106a]
 gi|167001537|ref|ZP_02267332.1| flagellar hook protein FlgE [Burkholderia mallei PRL-20]
 gi|167717660|ref|ZP_02400896.1| flagellar hook protein FlgE [Burkholderia pseudomallei DM98]
 gi|167736703|ref|ZP_02409477.1| flagellar hook protein FlgE [Burkholderia pseudomallei 14]
 gi|167813802|ref|ZP_02445482.1| flagellar hook protein FlgE [Burkholderia pseudomallei 91]
 gi|167822318|ref|ZP_02453789.1| flagellar hook protein FlgE [Burkholderia pseudomallei 9]
 gi|167843908|ref|ZP_02469416.1| flagellar hook protein FlgE [Burkholderia pseudomallei B7210]
 gi|167892410|ref|ZP_02479812.1| flagellar hook protein FlgE [Burkholderia pseudomallei 7894]
 gi|167900908|ref|ZP_02488113.1| flagellar hook protein FlgE [Burkholderia pseudomallei NCTC 13177]
 gi|167909127|ref|ZP_02496218.1| flagellar hook protein FlgE [Burkholderia pseudomallei 112]
 gi|167917164|ref|ZP_02504255.1| flagellar hook protein FlgE [Burkholderia pseudomallei BCC215]
 gi|217424944|ref|ZP_03456440.1| flagellar basal body protein FlaE [Burkholderia pseudomallei 576]
 gi|226199793|ref|ZP_03795344.1| flagellar basal body protein FlaE [Burkholderia pseudomallei
           Pakistan 9]
 gi|242315744|ref|ZP_04814760.1| flagellar basal body protein FlaE [Burkholderia pseudomallei 1106b]
 gi|254182140|ref|ZP_04888737.1| flagellar basal body protein FlaE [Burkholderia pseudomallei 1655]
 gi|254188070|ref|ZP_04894582.1| flagellar basal body protein FlaE [Burkholderia pseudomallei
           Pasteur 52237]
 gi|254196353|ref|ZP_04902777.1| flagellar basal body protein FlaE [Burkholderia pseudomallei S13]
 gi|254201896|ref|ZP_04908260.1| flagellar hook protein FlgE [Burkholderia mallei FMH]
 gi|254207230|ref|ZP_04913581.1| flagellar hook protein FlgE [Burkholderia mallei JHU]
 gi|254259636|ref|ZP_04950690.1| flagellar basal body protein FlaE [Burkholderia pseudomallei 1710a]
 gi|254295814|ref|ZP_04963271.1| flagellar basal body protein FlaE [Burkholderia pseudomallei 406e]
 gi|254359732|ref|ZP_04976003.1| flagellar hook protein FlgE [Burkholderia mallei 2002721280]
 gi|52208328|emb|CAH34261.1| putative flagellar hook protein [Burkholderia pseudomallei K96243]
 gi|52427988|gb|AAU48581.1| flagellar hook protein FlgE [Burkholderia mallei ATCC 23344]
 gi|76580412|gb|ABA49887.1| Flagella basal body rod protein [Burkholderia pseudomallei 1710b]
 gi|121227945|gb|ABM50463.1| flagellar hook protein FlgE [Burkholderia mallei SAVP1]
 gi|124292613|gb|ABN01882.1| flagellar hook protein FlgE [Burkholderia mallei NCTC 10229]
 gi|126227435|gb|ABN90975.1| flagellar basal body protein FlaE [Burkholderia pseudomallei 1106a]
 gi|126242528|gb|ABO05621.1| flagellar hook protein FlgE [Burkholderia mallei NCTC 10247]
 gi|147747790|gb|EDK54866.1| flagellar hook protein FlgE [Burkholderia mallei FMH]
 gi|147752772|gb|EDK59838.1| flagellar hook protein FlgE [Burkholderia mallei JHU]
 gi|148028946|gb|EDK86878.1| flagellar hook protein FlgE [Burkholderia mallei 2002721280]
 gi|157805870|gb|EDO83040.1| flagellar basal body protein FlaE [Burkholderia pseudomallei 406e]
 gi|157935750|gb|EDO91420.1| flagellar basal body protein FlaE [Burkholderia pseudomallei
           Pasteur 52237]
 gi|169653096|gb|EDS85789.1| flagellar basal body protein FlaE [Burkholderia pseudomallei S13]
 gi|184212678|gb|EDU09721.1| flagellar basal body protein FlaE [Burkholderia pseudomallei 1655]
 gi|217391964|gb|EEC31990.1| flagellar basal body protein FlaE [Burkholderia pseudomallei 576]
 gi|225928144|gb|EEH24180.1| flagellar basal body protein FlaE [Burkholderia pseudomallei
           Pakistan 9]
 gi|238522489|gb|EEP85933.1| flagellar hook protein FlgE [Burkholderia mallei GB8 horse 4]
 gi|242138983|gb|EES25385.1| flagellar basal body protein FlaE [Burkholderia pseudomallei 1106b]
 gi|243062738|gb|EES44924.1| flagellar hook protein FlgE [Burkholderia mallei PRL-20]
 gi|254218325|gb|EET07709.1| flagellar basal body protein FlaE [Burkholderia pseudomallei 1710a]
          Length = 413

 Score = 83.0 bits (203), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 64/201 (31%), Gaps = 6/201 (2%)

Query: 8   GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVASGKEY 65
           GL+        L  + +N++N +TVGF+    +FS++          +            
Sbjct: 6   GLSGLAGASSDLDVIGNNIANANTVGFKGSTAQFSDMYANSVASAVNNPIGIGTMLASVQ 65

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125
                G+  S+ + L+ A+ G+ +F + +      +RDG F+   +G +V++ G   +  
Sbjct: 66  QQFSQGTITSSTSSLNVAINGNGFFQMSNNGVTTYSRDGTFQRDKNGYIVNSQGLNLMGY 125

Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185
            A+    I     +        I+       T                 +   P      
Sbjct: 126 AANANGVINTAATVPLQAPTTNIAPTATTKITGQFNLNSQDAVPATTPFNYTDPTSYNYT 185

Query: 186 LEDLSGVTVKRGFLEDSNANS 206
                  T+        N N 
Sbjct: 186 TSVQVFDTLGGSQ----NVNL 202



 Score = 64.5 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 12/98 (12%), Positives = 34/98 (34%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLED 201
             + +   +  + L + +   G V   N+    +      +       +  T++   LE+
Sbjct: 315 YSNGQTSTLGQIVLANFNNPNGLVNVGNNQYVESAASGVPQISAPGSTNHGTLQGSALEN 374

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   ++ ++I   + + +    I   +      I 
Sbjct: 375 SNVDLTSQLVKLITAQRNYQANAQTIKTQQTVDQTLIN 412


>gi|330953721|gb|EGH53981.1| flagellar hook protein FlgE [Pseudomonas syringae Cit 7]
          Length = 244

 Score = 83.0 bits (203), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 52/134 (38%), Gaps = 4/134 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS----FV 59
           SFNIGL+   A  + L    +N++N  T GF++ + +F++             S      
Sbjct: 2   SFNIGLSGLYAANKSLDVTGNNIANVATTGFKSSRAEFADQYAQSIRGTSGNTSVGSGVT 61

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119
            +       +      T   LD A+ GD +F L +    + TR G F    +G +V++S 
Sbjct: 62  TAAVSQQFSQGSLTTGTANSLDLAINGDGFFMLSNNGEKLYTRAGAFHTDKEGYVVNSSN 121

Query: 120 KYPVLDMASVPIQI 133
                        +
Sbjct: 122 MKLQGYNVDANGSV 135


>gi|240145497|ref|ZP_04744098.1| flagellar basal body and hook protein [Roseburia intestinalis
           L1-82]
 gi|257202312|gb|EEV00597.1| flagellar basal body and hook protein [Roseburia intestinalis
           L1-82]
          Length = 551

 Score = 83.0 bits (203), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 26/145 (17%), Positives = 53/145 (36%), Gaps = 18/145 (12%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  S    ++     + ++  + +N++N +TV F++  V F +V+  + ++     +   
Sbjct: 1   MMRSMYSAVSGLKTHQTKMDVIGNNIANVNTVAFKSSSVVFQDVLYQMTSNASGANAATG 60

Query: 61  S---------------GKEYLSKEVGSFISTGTELDFALEGD---AWFALESPRGIILTR 102
           +                        G+  +TG   D  L       +F + +    + TR
Sbjct: 61  TGGVNAKQIGLGVTTGATNLSITTSGAAETTGRAFDIRLSDQSTTNFFVVNNGSENLFTR 120

Query: 103 DGRFKVTDDGSLVSASGKYPVLDMA 127
            G F V   G+L   S  Y V+   
Sbjct: 121 AGSFYVDGAGNLCMTSTGYTVMGWQ 145



 Score = 73.4 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 14/129 (10%), Positives = 40/129 (31%), Gaps = 6/129 (4%)

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           +           +   I    +   +      +   + +  + +     + G  +   + 
Sbjct: 420 SIDDGVTGKGKKLGAMIGISIDNNGLITGIYDNGNKETLGQIAVAQFANASGLEKVGENC 479

Query: 177 ISPNIPPTPLEDLSG------VTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
               +     + +         ++  G LE SN +   E  QMI   + F + + +I  +
Sbjct: 480 YRTTLNSGEFDGIGDEISADGSSMTSGELEMSNVDLSTEFTQMIITQRGFQANSRIITTS 539

Query: 231 EKSMLEAIR 239
           +  + E + 
Sbjct: 540 DTLLEELVN 548


>gi|126444045|ref|YP_001061246.1| flagellar hook protein FlgE [Burkholderia pseudomallei 668]
 gi|134280998|ref|ZP_01767708.1| flagellar biosynthesis/type III secretory pathway lipoprotein
           [Burkholderia pseudomallei 305]
 gi|167725930|ref|ZP_02409166.1| flagellar hook protein FlgE [Burkholderia pseudomallei DM98]
 gi|167905090|ref|ZP_02492295.1| flagellar hook protein FlgE [Burkholderia pseudomallei NCTC 13177]
 gi|254182894|ref|ZP_04889487.1| flagellar hook protein FlgE [Burkholderia pseudomallei 1655]
 gi|254299686|ref|ZP_04967135.1| flagellar hook protein FlgE [Burkholderia pseudomallei 406e]
 gi|125657218|gb|ABN48706.1| flagellar hook protein FlgE [Burkholderia pseudomallei]
 gi|126223536|gb|ABN87041.1| flagellar hook protein FlgE [Burkholderia pseudomallei 668]
 gi|134248020|gb|EBA48104.1| flagellar biosynthesis/type III secretory pathway lipoprotein
           [Burkholderia pseudomallei 305]
 gi|157809637|gb|EDO86807.1| flagellar hook protein FlgE [Burkholderia pseudomallei 406e]
 gi|184213428|gb|EDU10471.1| flagellar hook protein FlgE [Burkholderia pseudomallei 1655]
          Length = 395

 Score = 83.0 bits (203), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 76/196 (38%), Gaps = 8/196 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SFNI L+   A+  +L+T++ N++N +T GF+  +  F+ +V   + +     S   S  
Sbjct: 2   SFNIALSGINAINSQLNTISHNIANANTYGFKAGRANFATMVAGTQANGTYIGSITQSVG 61

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLVSASGKYP 122
                     + TG  LD A++G+ +F  +   G +  TR G F+   DG +V   G+  
Sbjct: 62  TRGGF-----LPTGRALDGAIDGNGFFVTKDSDGSMLFTRFGYFQRDADGYIVDGFGRRA 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
                             +            V      ++   +  F + +++  + ++ 
Sbjct: 117 QG--YGASGAYGDIRVPTDTEPAKASDSLEYVGNLSADWAAPKNPNFDKDDDTSFNHSVA 174

Query: 183 PTPLEDLSGVTVKRGF 198
            T  + L    +   +
Sbjct: 175 STVYDSLGRQHIVTQY 190



 Score = 73.4 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 12/92 (13%), Positives = 33/92 (35%), Gaps = 5/92 (5%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYE 209
           + ++ L +     G     ++    +              +   V  G LE SNA+   E
Sbjct: 304 VGSLALATFANQDGLSAVGDTAWRASAASGNPLIGSAGSGALGKVVAGSLELSNADVTQE 363

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           +  M+   + + + + ++    + M   ++ +
Sbjct: 364 LVDMMSAQRNYQANSKVLSTENQMMQALMQAL 395


>gi|254780525|ref|YP_003064938.1| flagellar hook protein FlgE [Candidatus Liberibacter asiaticus str.
           psy62]
 gi|254040202|gb|ACT56998.1| flagellar hook protein FlgE [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 421

 Score = 83.0 bits (203), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 59/124 (47%), Gaps = 2/124 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           S    ++   A   R+S V+DN++N DTVG++   + FS +V    ++       +    
Sbjct: 6   SMKTAMSGMDAQSNRVSAVSDNIANVDTVGYKRTAIAFSSLVFPSTSNSYVSG-GLEIST 64

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASGKYP 122
           + +  E GS + T +  D A++G  +F ++       LTR G F + ++G L + +G   
Sbjct: 65  KDMISEQGSLMHTASNTDLAIQGKGFFIVKGRDNVNCLTRAGDFHINNEGFLENVAGGVL 124

Query: 123 VLDM 126
           +   
Sbjct: 125 LGYP 128



 Score = 65.7 bits (158), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 23/208 (11%), Positives = 54/208 (25%), Gaps = 4/208 (1%)

Query: 32  VGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA 91
            G +  +V       +  N     ++ + + +       G   ++  +     +  +   
Sbjct: 215 TGDKKWEVSIFRQDQSTNNSFPYNVAPLNTVEVSFDPVTGYLANSSHKAISFNDNTSGID 274

Query: 92  LESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQK 151
            +    I  T           S ++        D +                        
Sbjct: 275 QQITIDISKTTQLAGGFIPQKSEINGHAPGKPKDFSVSKDGYVDIIYDDGTRVPIYRLAI 334

Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMG 211
             V +   L   D +     R++  IS   P           +  G LE +N +   E+ 
Sbjct: 335 ATVPSEDNLKLFDGNTYLPTRDSGDISIGFPGH----NQHGEIFSGALETANVDIASELT 390

Query: 212 QMIHLTQKFNSITTLIDENEKSMLEAIR 239
           ++I   + +   + +       M   I 
Sbjct: 391 ELIEAQRNYAVNSKVFQTGSDFMDILIS 418


>gi|54308097|ref|YP_129117.1| flagellar hook protein FlgE [Photobacterium profundum SS9]
 gi|46912523|emb|CAG19315.1| putative flagellar hook protein FlgE [Photobacterium profundum SS9]
          Length = 435

 Score = 83.0 bits (203), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 35/151 (23%), Positives = 64/151 (42%), Gaps = 6/151 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61
            FNI L+   A ++ L+T ++N++N +T GF+  + +F +V  +    N        V +
Sbjct: 2   GFNISLSGIGASQKDLNTTSNNIANANTYGFKESRAEFGDVYSSSIFSNAKTTTGGGVQT 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALE----SPRGIILTRDGRFKVTDDGSLVSA 117
                    GS I T   +D  + G  +FA+      P+   LTR+G F +  D  +V++
Sbjct: 62  SVVAQQFHEGSSIYTNNPMDLRISGSGFFAVADDKLQPQNSNLTRNGAFHLNKDNQIVNS 121

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEI 148
            G+Y +              E   +    + 
Sbjct: 122 EGQYLLGYGVDQETDQVTSYEPQAMKVPDQF 152



 Score = 69.5 bits (168), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 38/101 (37%), Gaps = 6/101 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISP-----NIPPTPLEDLSGVTVKRGFLED 201
             + +   +  +G+  V   QG V +  +  +                +  +VK G LE 
Sbjct: 336 YSNGENVTLGRVGMVRVANEQGLVSKGGTQWATGQDSGAAIWGEASQGAFGSVKSGTLEQ 395

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           SN +   E+  +I   + F + +  ++  +  + + I  I 
Sbjct: 396 SNIDMTQELVDLITAQRNFQANSRALE-VDNQLQQTILQIR 435


>gi|114569239|ref|YP_755919.1| hypothetical protein Mmar10_0688 [Maricaulis maris MCS10]
 gi|114339701|gb|ABI64981.1| protein of unknown function DUF1078 domain protein [Maricaulis
           maris MCS10]
          Length = 461

 Score = 83.0 bits (203), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 77/199 (38%), Gaps = 6/199 (3%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
            ++   G +  ++    L++++DN++N +TVG++     F+ +  +  +      + V S
Sbjct: 4   NSALLAGASGLISNSNALASISDNIANVNTVGYKRASAVFTPLYDSDSSTKGYSAAGVNS 63

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESP------RGIILTRDGRFKVTDDGSLV 115
                  E G   +  +  D A+ G  +F +           +  TR GRF    +G L 
Sbjct: 64  VARLAIGESGLLTAGSSPTDLAISGRGFFVVRDDANVNSSDPVSFTRAGRFTPDTNGYLR 123

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
           + +GKY      +    +PQ     N  E   +S  G       +  ++ +    +  ++
Sbjct: 124 NDAGKYLSGWPVAADGSVPQNPSDLNALETINLSSIGGAAEATTIMGINANLQQSQAISA 183

Query: 176 GISPNIPPTPLEDLSGVTV 194
             +         ++S  TV
Sbjct: 184 DEATYDATASATNMSSGTV 202



 Score = 76.1 bits (185), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 32/90 (35%), Gaps = 5/90 (5%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLEDSNANSMYE 209
           I  + + +     G   +     +           P    S   +    LE SN +   E
Sbjct: 369 IYQIPVATFVNPDGLEAQSGGTFTVTPESGAYTLNPPGLGSSGQIAASTLESSNVDLANE 428

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              +I   + +++ + +I   ++ + EAIR
Sbjct: 429 FTSLITTQRAYSASSKIITTADEMLDEAIR 458


>gi|84388091|ref|ZP_00990987.1| flagellar hook protein [Vibrio splendidus 12B01]
 gi|84377158|gb|EAP94028.1| flagellar hook protein [Vibrio splendidus 12B01]
          Length = 434

 Score = 83.0 bits (203), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 30/207 (14%), Positives = 68/207 (32%), Gaps = 13/207 (6%)

Query: 6   NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGK 63
            + L+   A +  L+T ++N++N +T GF+  + +F +V  +    N          + +
Sbjct: 3   YVALSGLSAAQLDLNTTSNNIANANTFGFKESRAEFGDVYSSSLFTNAKTTAGGGAQASQ 62

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWF----ALESPRGIILTRDGRFKVTDDGSLVSASG 119
                  GS I T   +D  + G  +F        P    LTR+G F +  D  +V+A+ 
Sbjct: 63  VAQQFHEGSSIYTNNPMDLRVSGTGFFAVSKDRMVPEINELTRNGAFHLNKDNYMVTAND 122

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF-------VRR 172
           ++ +                  +    E  +  +        ++  +           + 
Sbjct: 123 EFLLGYDVDPNSGEVLSYAPKPLDIPAEFGKPKQTENIEVGVNLPANGDLKDPAAFNYQD 182

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFL 199
            ++                  +   +L
Sbjct: 183 ADTYNRATSSTVYDSMGQSYKLTTYYL 209



 Score = 67.6 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 19/145 (13%), Positives = 48/145 (33%), Gaps = 6/145 (4%)

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ-KGKVIATMG 159
           T+  +F +       +        +  +    + + D        G  S  +  ++  +G
Sbjct: 288 TQVLKFGLDSSTQFAAPFELTKFDEDGATTGFLTKIDFDEYGSVLGTYSNGENVMLGRVG 347

Query: 160 LYSVDMSQGFVRRENSGISPNIP-----PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMI 214
           L  V   QG  ++  +                   S  ++  G LE SN +   E+  +I
Sbjct: 348 LVRVPNEQGLDKKGGTQWDSTNDSGSKIWGESNKGSFGSINNGSLEQSNIDMTQELVDLI 407

Query: 215 HLTQKFNSITTLIDENEKSMLEAIR 239
              + F + +  ++ + +     ++
Sbjct: 408 SAQRNFQANSRSLEVHNQLQQNILQ 432


>gi|238924161|ref|YP_002937677.1| flagellar hook protein [Eubacterium rectale ATCC 33656]
 gi|238875836|gb|ACR75543.1| flagellar hook protein [Eubacterium rectale ATCC 33656]
          Length = 477

 Score = 83.0 bits (203), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 50/145 (34%), Gaps = 18/145 (12%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  S    ++     + R+  + +N++N +T  F+   V+FSE++    +          
Sbjct: 1   MMRSLYSAVSGLKTHQTRMDVIGNNIANVNTEAFKASSVRFSEIMYQTTSGASAGNGAAG 60

Query: 61  SG---------------KEYLSKEVGSFISTGTELDFALEGD---AWFALESPRGIILTR 102
           +G                       GS  +TG   D  L       +F +      + TR
Sbjct: 61  TGGKNAKQIGLGVKSGATAVNITGAGSAETTGNPFDLRLNDKNATNFFVVSDGTNRLFTR 120

Query: 103 DGRFKVTDDGSLVSASGKYPVLDMA 127
            G F V  +G L  +S  Y +    
Sbjct: 121 AGDFYVDGNGYLCMSSTGYTLQGWQ 145



 Score = 77.2 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 22/209 (10%), Positives = 60/209 (28%), Gaps = 12/209 (5%)

Query: 38  KVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG 97
           +  F +             S  ++        +   +S     D ++ G  +    S   
Sbjct: 271 QTIFEDASLVFDQSEGTFTSISSANSPAAKT-INLNLSVLNTQDASINGSNF----SNIE 325

Query: 98  IILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA- 156
           +  ++   +      ++   +G             +       +    G       V+  
Sbjct: 326 VDFSKSMNYNNNGTSTIGGMNGDLQGDGKGKALGALTGITVSDDGKIYGSYDNGNTVLLC 385

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLE------DLSGVTVKRGFLEDSNANSMYEM 210
            + +     + G  +  ++     +     +         G ++  G LE SN +   + 
Sbjct: 386 QIAVAQFANASGLEKIGDNCYQSTLNSGEFDGIGVEISADGGSISSGELEMSNVDLSSQF 445

Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             MI   + F + + +I  ++  + E I 
Sbjct: 446 TDMIVTQRGFQANSRVITTSDTLLEELIN 474


>gi|268680906|ref|YP_003305337.1| fagellar hook-basal body protein [Sulfurospirillum deleyianum DSM
           6946]
 gi|268618937|gb|ACZ13302.1| fagellar hook-basal body protein [Sulfurospirillum deleyianum DSM
           6946]
          Length = 567

 Score = 82.6 bits (202), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 51/128 (39%), Gaps = 6/128 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV-----GAIKNDIDQK 55
           M +S   G++     +  +  + +N+SN +T GF+    + S +      G   +  +  
Sbjct: 1   MNSSLYNGVSGIKTSQFYIDVIGNNISNVNTNGFKGSTPEVSSLFSSILVGTYNSYSNGV 60

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSL 114
                S    L    G   +T    D AL  + WF ++ +      TR G F +  +G+L
Sbjct: 61  GMGAQSFNTALDMSQGILENTDNTFDLALGSEGWFGVQGADGNTYYTRAGSFSLDAEGNL 120

Query: 115 VSASGKYP 122
           V   G Y 
Sbjct: 121 VDGDGNYL 128



 Score = 61.4 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 36/93 (38%), Gaps = 8/93 (8%)

Query: 155 IATMGLYSVDMSQGFV--------RRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANS 206
           +A + +Y     QG +           NSG +        E   G  V    LE SN + 
Sbjct: 472 VAKIAVYHFQNDQGLMAESSNLFSESSNSGKAFFYADESGESFLGSKVYSHKLEGSNVSL 531

Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              + ++I + + F++    I  +++ +  AI 
Sbjct: 532 ATALTELIIVQKAFDASAKSITTSDELLKNAIN 564


>gi|237799206|ref|ZP_04587667.1| flagellar hook protein FlgE [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|237806225|ref|ZP_04592929.1| flagellar hook protein FlgE [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|331022061|gb|EGI02118.1| flagellar hook protein FlgE [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|331027338|gb|EGI07393.1| flagellar hook protein FlgE [Pseudomonas syringae pv. oryzae str.
           1_6]
          Length = 442

 Score = 82.6 bits (202), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 34/134 (25%), Positives = 55/134 (41%), Gaps = 4/134 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI---DQKISFVA 60
           SFNIGL+   A  + L    +N++N  T GF++ + +F++                S V 
Sbjct: 2   SFNIGLSGLYAANKSLDVTGNNIANVATTGFKSSRTEFADQYAQSIRGTSGKSSVGSGVT 61

Query: 61  SGKEYLSKEVGS-FISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119
           +         GS    T   LD A+ GD +F L +    + TR G F    +G +V++SG
Sbjct: 62  TAAVSQQFSQGSLTTGTANSLDLAINGDGFFMLSNNGEKLFTRAGAFHTDKEGYVVNSSG 121

Query: 120 KYPVLDMASVPIQI 133
                        +
Sbjct: 122 MKLQGYNVDASGSV 135



 Score = 64.5 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 17/123 (13%), Positives = 33/123 (26%), Gaps = 5/123 (4%)

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
              D  +         +          + K +VI    L S    QG  +   +      
Sbjct: 318 QDQDGYATGQLSAMNVDSTGNLFATYTNGKSQVIGQTSLTSFANVQGLAQAGGTNWRETF 377

Query: 182 PPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                     +  +   +    LE+SN +   E+  +I     + +    I      M  
Sbjct: 378 SSGVPVSGAPQSGTLGYITGQALEESNVDLTVELVNLIKAQSNYQANAKTISTQSTIMQT 437

Query: 237 AIR 239
            I+
Sbjct: 438 TIQ 440


>gi|85058011|ref|YP_453713.1| flagellar hook protein FlgE [Sodalis glossinidius str. 'morsitans']
 gi|84778531|dbj|BAE73308.1| flagellar hook protein FlgE [Sodalis glossinidius str. 'morsitans']
          Length = 404

 Score = 82.6 bits (202), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 69/197 (35%), Gaps = 6/197 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
            F  G++   A  Q L  + +N++N  TVGF++    F+++       +  +++ V    
Sbjct: 2   GFAQGVSGLNAAAQALDVIGNNIANAQTVGFKSSSASFADMFSESMIGLGVQLAGVQ--- 58

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+ I+    ++ A+ G  +F   ++   I  +R+G F+    G +V+  GKY 
Sbjct: 59  --QDFNDGTMIAGAGNINMAIAGSGFFRLADNGGKIYYSRNGEFERNKYGEIVNKQGKYL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+             +                      +++  ++   S       
Sbjct: 117 TGYKATGTPLGNITVPDTPMPGAVSTEGSLGDNLPSNSEPPKVAEFDIKEPKSYNYSTQF 176

Query: 183 PTPLEDLSGVTVKRGFL 199
                  +   +K  ++
Sbjct: 177 TAYDSLGNPHNIKVYYI 193



 Score = 72.6 bits (176), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 37/98 (37%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLED 201
             +Q+ ++IA + + S   + G     ++  +             +  S   ++   LE 
Sbjct: 305 YSNQQTQLIAQVVMASFTNTGGLQPSGDNCWTETGASGAPLIGTSDTGSFGVIRGKMLEA 364

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E+ +M+   + + S    I   ++ +   + 
Sbjct: 365 SNVDMSNELVKMMTQQRNYQSNAQTIKTQDQLLQTLVS 402


>gi|254496887|ref|ZP_05109735.1| flagellar hook protein FlgE [Legionella drancourtii LLAP12]
 gi|254353906|gb|EET12593.1| flagellar hook protein FlgE [Legionella drancourtii LLAP12]
          Length = 437

 Score = 82.6 bits (202), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 33/155 (21%), Positives = 65/155 (41%), Gaps = 2/155 (1%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV--VGAIKNDIDQKISFVASG 62
           F+ G++   A    L  + +N++N+ TVGF+  +  F ++   G   +        V   
Sbjct: 3   FDTGISGLQAASNNLDVIGNNIANSSTVGFKGSRANFGDIYSFGGYGSSGTTPGGGVMLT 62

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
               S   G+  ST   LD A+ G+ +F L +      +R G+F + +D  + ++SG++ 
Sbjct: 63  SIQQSFASGTMTSTNNTLDLAISGNGFFILNNQGATSYSRAGQFTLNNDNYITNSSGQFL 122

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157
              +A     I        V       +   +++T
Sbjct: 123 TGYLADAAGNITGASGNIQVNMANLSPKATTLVST 157



 Score = 59.1 bits (141), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 15/98 (15%), Positives = 29/98 (29%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLED 201
             + +   +  + L +     G     N   +                S  T+  G LE+
Sbjct: 338 YSNGQTLAMGQIQLANFADLNGLQNIGNVCWTATATSGQALIGTGGTGSFGTLLSGRLEE 397

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E+  +I   + F +    I   +      I 
Sbjct: 398 SNVDITSELVDLIGAQRDFQANAQTIRAGDTITQTIIN 435


>gi|188534170|ref|YP_001907967.1| flagellar hook protein FlgE [Erwinia tasmaniensis Et1/99]
 gi|188029212|emb|CAO97084.1| Flagellar biosynthesis, hook protein [Erwinia tasmaniensis Et1/99]
          Length = 402

 Score = 82.6 bits (202), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 29/232 (12%), Positives = 70/232 (30%), Gaps = 19/232 (8%)

Query: 25  NMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFAL 84
           N++++ T   ++    F  +     + ++      A     +     S  + GT  +   
Sbjct: 171 NINDSTTYNAKSAMTTFDSL--GNAHTVNLYFVKTADNNWTVHPVDSSTGTAGTNTNLVF 228

Query: 85  EGDAWFALESPRGIIL--------TRDGRFKVTDDGSLVSASG----KYPVLDMASVPIQ 132
           + +      +   +          T      ++  GSL   +G      P  D       
Sbjct: 229 DANGQLTTPANGQVSYSMGALNGSTAQPGMTISLAGSLQQNNGKSTFGNPTQDGYKPGEL 288

Query: 133 IPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----E 187
              +            +++ +V+  + L +    +G     ++  S              
Sbjct: 289 TSYQINDDGTLVGSYSNEQTQVLGQIVLSNFANPEGLKSEGDNVWSATSSSGQALTGTAG 348

Query: 188 DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             +  T+  G LE SN +   E+  MI   + + S    I   ++ +   + 
Sbjct: 349 TGNLGTLTAGALESSNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400



 Score = 71.1 bits (172), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 60/133 (45%), Gaps = 6/133 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
            F+  ++   A    L  + +N+SN+ T GF++  V F+++    K  +  K++ V    
Sbjct: 2   GFSQAVSGLNAASSNLDVIGNNISNSATAGFKSSTVAFADMFAGSKVGLGTKVASV---- 57

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +T   LD A+    +F + ++  G+  +R+G+F +  + ++V+  G   
Sbjct: 58  -VQDFGDGTTTTTSRGLDVAISSAGFFRMADANGGVFYSRNGQFTLDAERNIVNMQGLKL 116

Query: 123 VLDMASVPIQIPQ 135
               A+      Q
Sbjct: 117 TGYPATGTPPTVQ 129


>gi|94263193|ref|ZP_01287010.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|93456411|gb|EAT06531.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
          Length = 619

 Score = 82.6 bits (202), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 26/205 (12%), Positives = 66/205 (32%), Gaps = 10/205 (4%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
                G++   ++   ++ + DN++N +T  +++ +  F  ++ + +    +  +     
Sbjct: 5   NMIFNGVSGLNSMSGNMAVMGDNIANVNTTSYKSSQASFQNILTSSQERFGEIGNGSQVA 64

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALESP--RGIILTRDGRF-------KVTDDGS 113
               +   G   +T    D A+ G  +F + +P    ++ TRDG+F             +
Sbjct: 65  AITKNFRPGDLETTNQSTDMAISGKGFFMVNNPLADEMLYTRDGQFKLEKSAITPEGYYN 124

Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRE 173
           L + +G        +         +I         +     +A                 
Sbjct: 125 LATPAGHLVQGRNLAANGGADNLGDILIQEVSDPRATGNVSLAMNLQSKPGREDA-QPLH 183

Query: 174 NSGISPNIPPTPLEDLSGVTVKRGF 198
           +S       P   +     T+ + F
Sbjct: 184 SSWDGAAAEPLAADRYDYRTIMQAF 208



 Score = 68.0 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 20/145 (13%), Positives = 40/145 (27%), Gaps = 6/145 (4%)

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-IATMG 159
           +RD   +     +  +AS              +       +    G  S +     A + 
Sbjct: 473 SRDNDLQPLRTTNYATASSTLSQQQDGFGEGYLQDISINPDGTMVGRYSNQQSFEQAQVM 532

Query: 160 LYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMI 214
           L      +G     ++                 + S   V    LE SN +   E   +I
Sbjct: 533 LADFADYRGLEPTSHNAYKATAMAGEPTIGVAGEGSFGKVLGNTLEGSNVDLGREFSDLI 592

Query: 215 HLTQKFNSITTLIDENEKSMLEAIR 239
              + F + +  I   ++     +R
Sbjct: 593 MTQRIFQANSKSITTADEVFDTLMR 617


>gi|294140184|ref|YP_003556162.1| flagellar hook protein FlgE [Shewanella violacea DSS12]
 gi|293326653|dbj|BAJ01384.1| flagellar hook protein FlgE [Shewanella violacea DSS12]
          Length = 454

 Score = 82.6 bits (202), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 36/125 (28%), Positives = 57/125 (45%), Gaps = 5/125 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61
           SFNI L+   A ++ L+T A+N++N +++GF+  + +F++V       N        V +
Sbjct: 2   SFNIALSGIAAAQKDLNTTANNIANVNSIGFKESRAEFADVYANSIFANSKTAVGGGVTT 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESP---RGIILTRDGRFKVTDDGSLVSAS 118
            +       GS   T   LD A+ G  +F   S    +    TR G FKV     LV + 
Sbjct: 62  SQVAQQFHQGSLQFTNNALDMAINGGGFFVTSSELEAKDHSFTRAGAFKVNSADYLVDSQ 121

Query: 119 GKYPV 123
           G Y  
Sbjct: 122 GNYLQ 126



 Score = 67.6 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 15/137 (10%), Positives = 40/137 (29%), Gaps = 5/137 (3%)

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
                   +        D  +V      +     +      +     +A + L      Q
Sbjct: 316 NNPTQYASTFEVTELNQDGTTVGRLTNVEVGADGLINASYSNGSTVALARVALARFANEQ 375

Query: 168 GFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222
           G  +  N+    ++             +  +++   LE SN +   E+  +I   + F +
Sbjct: 376 GLTQVGNTSWRASLDSGLALAGEANSGTFGSIRSSALEQSNVDLTTELVDLISAQRNFQA 435

Query: 223 ITTLIDENEKSMLEAIR 239
            +  ++ N       ++
Sbjct: 436 NSRTLEVNNTLQQTILQ 452


>gi|126441055|ref|YP_001057322.1| flagellar hook protein FlgE [Burkholderia pseudomallei 668]
 gi|126220548|gb|ABN84054.1| flagellar basal body protein FlaE [Burkholderia pseudomallei 668]
          Length = 413

 Score = 82.6 bits (202), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 64/201 (31%), Gaps = 6/201 (2%)

Query: 8   GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVASGKEY 65
           GL+        L  + +N++N +TVGF+    +FS++          +            
Sbjct: 6   GLSGLAGASSDLDVIGNNIANANTVGFKGSTAQFSDMYANSVASAVNNPIGIGTMLASVQ 65

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125
                G+  S+ + L+ A+ G+ +F + +      +RDG F+   +G +V++ G   +  
Sbjct: 66  QQFSQGTITSSTSSLNVAINGNGFFQMSNNGVTTYSRDGTFQRDKNGYIVNSQGLNLMGY 125

Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185
            A+    I     +        I+       T                 +   P      
Sbjct: 126 AANANGVINTAATVPLQAPTTNIAPTATTKITGQFNLNSQDAVPATTPFNYTDPTSYNYT 185

Query: 186 LEDLSGVTVKRGFLEDSNANS 206
                  T+        N N 
Sbjct: 186 TSVQVFDTLGGSQ----NVNL 202



 Score = 64.1 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 12/98 (12%), Positives = 34/98 (34%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLED 201
             + +   +  + L + +   G V   N+    +      +       +  T++   LE+
Sbjct: 315 YSNGQTSTLGQIVLANFNNPNGLVNVGNNQYVESAASGVPQISAPGSTNHGTLQGSALEN 374

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   ++ ++I   + + +    I   +      I 
Sbjct: 375 SNVDLTSQLVKLITAQRNYQANAQTIKTQQTVDQTLIN 412


>gi|254175270|ref|ZP_04881931.1| flagellar hook protein FlgE [Burkholderia mallei ATCC 10399]
 gi|160696315|gb|EDP86285.1| flagellar hook protein FlgE [Burkholderia mallei ATCC 10399]
          Length = 413

 Score = 82.6 bits (202), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 64/201 (31%), Gaps = 6/201 (2%)

Query: 8   GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVASGKEY 65
           GL+        L  + +N++N +TVGF+    +FS++          +            
Sbjct: 6   GLSGLAGASSDLDVIGNNIANANTVGFKGSTAQFSDMYANSVASAVNNPIGIGTMLASVQ 65

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125
                G+  S+ + L+ A+ G+ +F + +      +RDG F+   +G +V++ G   +  
Sbjct: 66  QQFSQGTITSSTSSLNVAINGNGFFQMSNNGVTTYSRDGMFQRDKNGYIVNSQGLNLMGY 125

Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185
            A+    I     +        I+       T                 +   P      
Sbjct: 126 AANANGVINTAATVPLQAPTTNIAPTATTKITGQFNLNSQDAVPATTPFNYTDPTSYNYT 185

Query: 186 LEDLSGVTVKRGFLEDSNANS 206
                  T+        N N 
Sbjct: 186 TSVQVFDTLGGSQ----NVNL 202



 Score = 64.1 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 12/98 (12%), Positives = 34/98 (34%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLED 201
             + +   +  + L + +   G V   N+    +      +       +  T++   LE+
Sbjct: 315 YSNGQTSTLGQIVLANFNNPNGLVNVGNNQYVESAASGVPQISAPGSTNHGTLQGSALEN 374

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   ++ ++I   + + +    I   +      I 
Sbjct: 375 SNVDLTSQLVKLITAQRNYQANAQTIKTQQTVDQTLIN 412


>gi|149908759|ref|ZP_01897420.1| flagellar hook protein [Moritella sp. PE36]
 gi|149808301|gb|EDM68240.1| flagellar hook protein [Moritella sp. PE36]
          Length = 437

 Score = 82.6 bits (202), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 54/130 (41%), Gaps = 5/130 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           S++IGL+   +  ++L+ ++ N++N +T GF++ + +FS V                +  
Sbjct: 2   SYSIGLSGLRSTNEQLNVISQNIANVNTSGFKSGRAEFSSVYS-----GGSAGGVEVAAI 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPV 123
                  G  ++TG  +D A+ G  +F L +      TR G F       + ++SG    
Sbjct: 57  SSNFDRDGDVVNTGRSMDLAISGRGFFVLNNGGETSYTRAGSFVRNASNYIETSSGARLQ 116

Query: 124 LDMASVPIQI 133
                    +
Sbjct: 117 GYPVDANGAL 126



 Score = 71.4 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 19/142 (13%), Positives = 42/142 (29%), Gaps = 9/142 (6%)

Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162
                       +S +            I+I     ++ V   G+   +GKVI      +
Sbjct: 298 MTNMSQNAASFSLSRNETNGYGAGDLKTIRIDDDGSLYGVYTNGQDKLQGKVILA----N 353

Query: 163 VDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217
                G  + +N+    +              +  ++  G  E SN +   E+  ++   
Sbjct: 354 FANPNGLRQGDNTTWGQSFASGAPTVGLPSSGTLGSLTSGAYEGSNVDLTGELVSLMTAQ 413

Query: 218 QKFNSITTLIDENEKSMLEAIR 239
           + + + +  I   EK       
Sbjct: 414 RNYQANSKTISAAEKMTQVLFN 435


>gi|325291962|ref|YP_004277826.1| Flagellar hook protein FlgE [Agrobacterium sp. H13-3]
 gi|325059815|gb|ADY63506.1| Flagellar hook protein FlgE [Agrobacterium sp. H13-3]
          Length = 426

 Score = 82.6 bits (202), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 64/191 (33%), Gaps = 2/191 (1%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
              G++   A   +L TV DN++N  T G++     FS +V    +        V S   
Sbjct: 7   MRTGVSGMNAQANKLGTVGDNIANASTTGYKRASTSFSSLVLPSSS-GSYASGGVQSNVR 65

Query: 65  YLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASGKYPV 123
           Y   E G+   T +  D A++G+ +F ++   G    TR G F    +G L +A+G   +
Sbjct: 66  YSISEQGNLSYTTSSTDLAIQGNGFFVVQDGGGTPYLTRAGSFVKNAEGYLENAAGFQLM 125

Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183
                        +    +      +       +                 +G  P+   
Sbjct: 126 GYPYGANAPAAVVNGFTGLEAVNVNNFGLTASPSTQGSFPANLNRDEAAVAAGSRPSDNL 185

Query: 184 TPLEDLSGVTV 194
                 +  ++
Sbjct: 186 ATSTIGNKTSL 196



 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 16/125 (12%), Positives = 37/125 (29%), Gaps = 5/125 (4%)

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
              +L+          +     V          + I  + + +V        +  +   P
Sbjct: 299 GTAILNGNGPSQIKDVEIGKDGVVTAVYQDGGRRNIYQLAVATVPSVDNLSPQNGNVYLP 358

Query: 180 NIPPTP-----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
           +           +  S   +++G LE SN +   E+  MI   + + + + +       M
Sbjct: 359 SNESGVVTIGFPQTGSFGYIQKGALEGSNVDIASELTDMIESQRIYTANSKVFQTGSDLM 418

Query: 235 LEAIR 239
              I 
Sbjct: 419 DVLIN 423


>gi|320107029|ref|YP_004182619.1| flagellar hook-basal body protein [Terriglobus saanensis SP1PR4]
 gi|319925550|gb|ADV82625.1| flagellar hook-basal body protein [Terriglobus saanensis SP1PR4]
          Length = 408

 Score = 82.6 bits (202), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 30/128 (23%), Positives = 56/128 (43%), Gaps = 5/128 (3%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----KNDIDQKI 56
             SF+I L+   A    L T+ +N++N ++V ++   V FS++          N   Q  
Sbjct: 1   MPSFSIALSGLKADSVALDTIGNNLANMNSVAYKKQNVNFSDLFYQTIGVSGANTPQQVG 60

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVS 116
                         G F   G+    A+ GD +F + +     LTR+G F++   G+L++
Sbjct: 61  LGTQVSDISTDYTQGGFNPGGSSTQMAINGDGFFVVSNGGVQELTRNGDFQLDSSGNLIT 120

Query: 117 ASGKYPVL 124
           + G+  + 
Sbjct: 121 SDGQSVMG 128



 Score = 62.6 bits (150), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 18/129 (13%), Positives = 38/129 (29%), Gaps = 5/129 (3%)

Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174
           V+AS      + +          +          +   +V+  + L +V   QG  R  N
Sbjct: 276 VTASSANFAANGSPSGKYQSFSVDSTGTITAQFSNGNTEVLGQVALATVSNEQGLTRMGN 335

Query: 175 SGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
                +                  ++   LE SN +   E   +I   + F + +  +  
Sbjct: 336 DLYVASRASGSPNVGVAGVGGRGDIEGNALELSNVDISTEFANLIVAQRAFEANSKTVTT 395

Query: 230 NEKSMLEAI 238
            +    + I
Sbjct: 396 FDTVTQDTI 404


>gi|90411005|ref|ZP_01219019.1| flagellar hook protein [Photobacterium profundum 3TCK]
 gi|90328218|gb|EAS44529.1| flagellar hook protein [Photobacterium profundum 3TCK]
          Length = 435

 Score = 82.6 bits (202), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 34/148 (22%), Positives = 63/148 (42%), Gaps = 6/148 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61
            FNI L+   A ++ L+T ++N++N +T GF+  + +F +V  +    N        V +
Sbjct: 2   GFNISLSGIGASQKDLNTTSNNIANANTYGFKESRAEFGDVYSSSIFSNAKTTTGGGVQT 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALE----SPRGIILTRDGRFKVTDDGSLVSA 117
                    GS I T   +D  + G  +FA+      P+   LTR+G F +  D  +V++
Sbjct: 62  SVVAQQFHEGSSIYTNNPMDLRISGSGFFAVADDKLQPQNNNLTRNGAFHLNKDNQVVNS 121

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEK 145
            G++ +              E   +   
Sbjct: 122 EGQFLLGYGVDQETDQVTSYEPQAMKVP 149



 Score = 69.1 bits (167), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 38/101 (37%), Gaps = 6/101 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISP-----NIPPTPLEDLSGVTVKRGFLED 201
             + +   +  +G+  V   QG V +  +  +                +  +VK G LE 
Sbjct: 336 YSNGENVTLGRVGMVRVANEQGLVSKGGTQWATGQDSGAAIWGEASQGAFGSVKSGTLEQ 395

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           SN +   E+  +I   + F + +  ++  +  + + I  I 
Sbjct: 396 SNIDMTQELVDLITAQRNFQANSRALE-VDNQLQQTILQIR 435


>gi|124516303|gb|EAY57811.1| probable flagellar hook protein FlgE [Leptospirillum rubarum]
          Length = 457

 Score = 82.6 bits (202), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 53/130 (40%), Gaps = 7/130 (5%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND------IDQK 55
            +S  +  +   A+   +S + +N++N +TVGF+  +  F+ V G             Q 
Sbjct: 4   LSSMYVATSGLNAMGTDMSVIGNNITNLNTVGFKQGRAVFANVYGQTMTGRSNTVNTSQP 63

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSL 114
            S V           GS  ++   LD A++G+ +  + S  G    TR+G   +   G +
Sbjct: 64  GSGVYVDAIQQEFTQGSVQASTNALDLAIQGNGFLTVRSKDGQKFYTRNGELALDKTGRI 123

Query: 115 VSASGKYPVL 124
           V  S +    
Sbjct: 124 VDTSNRALQG 133



 Score = 60.3 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 13/96 (13%), Positives = 30/96 (31%), Gaps = 5/96 (5%)

Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANS 206
            KV+  + + S +   G      +    +I                 +    LE S  + 
Sbjct: 362 QKVLGVVAIASFNNPGGLASVGGNAYIESIASGVPNFGRPGQGGRGALLSNSLELSTTDL 421

Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
             +M  MI   + + +  ++I  +   +   +  I 
Sbjct: 422 GRQMVDMITAERGYQASASIIATDNTILNTLLTRIG 457


>gi|167576662|ref|ZP_02369536.1| flagellar hook protein flgE [Burkholderia thailandensis TXDOH]
          Length = 395

 Score = 82.6 bits (202), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 74/196 (37%), Gaps = 8/196 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SFNI L+   A+  +L+T++ N++N++T GF+  +  F+ +V   + +     S   S  
Sbjct: 2   SFNIALSGINAINSQLNTISHNIANSNTYGFKAGRANFATMVAGTQANGTYIGSTTQSVG 61

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASGKYP 122
                     + TG  LD A++G+ +F  +      + TR G FK   DG +V   G   
Sbjct: 62  TRGGF-----LPTGRALDGAIDGNGFFVTKDSDGSTLFTRVGYFKRDADGYIVD--GFRR 114

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
                             +            V      +    +  F + +++  + ++ 
Sbjct: 115 RAQGYGASGAYGDIRVPTDTEPAKASDSLEYVGNLSADWDAPKNPTFDKDDDTSFNHSVA 174

Query: 183 PTPLEDLSGVTVKRGF 198
            T  + L    +   +
Sbjct: 175 STVYDSLGRQHIVTQY 190



 Score = 74.5 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 12/92 (13%), Positives = 33/92 (35%), Gaps = 5/92 (5%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYE 209
           + ++ L +     G     ++    +              +   V  G LE SNA+   E
Sbjct: 304 VGSLALATFANQDGLTAVGDTAWRASAASGNPLIGSAGSGALGKVVAGSLELSNADVTKE 363

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           +  M+   + + + + ++    + M   ++ +
Sbjct: 364 LVDMMSAQRNYQANSKVLSTENQMMQALMQAL 395


>gi|319409169|emb|CBI82813.1| Flagellar hook protein FlgE [Bartonella schoenbuchensis R1]
          Length = 403

 Score = 82.6 bits (202), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 70/181 (38%), Gaps = 11/181 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M      G++   A   RLS VA+N++N +T+G++   V+FS  V     D         
Sbjct: 6   MMR---TGVSGMNAQGTRLSGVAENVANVNTIGYKRTDVQFSNYVIP-SGDYAYVPGGAR 61

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASG 119
           S   +     G   +TG   D  ++G+ +F +    GI   TR G F    DG + + +G
Sbjct: 62  SYVGHDISISGPARATGRMGDVMIDGNGFFRVADENGIEYLTRAGSFSRDKDGYVRNLAG 121

Query: 120 KYPVLDM------ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRE 173
            Y + +          P  +   +    +  K       + +   G    +  + +  ++
Sbjct: 122 YYLLDEDGQRVQIKGGPTDLFGPEVTTKIDFKVNFDASAEALDVHGDIDPNDPESYNHKK 181

Query: 174 N 174
           +
Sbjct: 182 S 182



 Score = 73.7 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 15/98 (15%), Positives = 33/98 (33%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLED 201
             + + +V+  +G+ +V   +       S    N                  +  G+LED
Sbjct: 303 YTNHQMRVVGYVGMTTVTSPESLTVLSGSVFGTNSRTGGQMMGRPGDGVFGLLFSGYLED 362

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN     E+  MI   + + + + +     + M   + 
Sbjct: 363 SNVEMSDELTDMIEAQRNYTANSKVFQTGSELMDVIVN 400


>gi|291276999|ref|YP_003516771.1| flagellar hook protein FlgE [Helicobacter mustelae 12198]
 gi|290964193|emb|CBG40039.1| Putative flagellar hook protein, FlgE [Helicobacter mustelae 12198]
          Length = 600

 Score = 82.6 bits (202), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 30/149 (20%), Positives = 55/149 (36%), Gaps = 21/149 (14%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------Q 54
           M  +     +     +  L ++++N++N +T G+R    +F  ++      ++       
Sbjct: 1   MNNTILNSYSGIKTHQFGLDSISNNIANVNTPGYREHIPEFKTLLSRNIASVNGSTVSSD 60

Query: 55  KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA---------------LESPRGII 99
               V+     +S + G +  +  + D A EG  WF                 E  +   
Sbjct: 61  SNYGVSVSSNAISTKSGDYKRSDGDFDMAYEGKGWFIVGKNSKGSLSINEDGYEGNQQNY 120

Query: 100 LTRDGRFKVTDDGSLVSASGKYPVLDMAS 128
            TRDG F    DG LV+A+G Y       
Sbjct: 121 FTRDGSFSRDSDGYLVNAAGYYVYGLDLG 149



 Score = 70.3 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 17/128 (13%), Positives = 39/128 (30%), Gaps = 3/128 (2%)

Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171
           G  +  +G   +     V   + +        ++G     G +     L     + G  +
Sbjct: 473 GVSIDENGIIQLNFDNGVSTPMGRIGIAAFSNDQGLHKVGGNL---FELKQTTDNNGDNK 529

Query: 172 RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
             +              L    V   +LE SN +    +  +I + + ++     +   +
Sbjct: 530 ILSGAPILGWDGDGDGRLKFGRVMHKYLETSNTDVTSALTNLILMQRGYSMNAKALSTGD 589

Query: 232 KSMLEAIR 239
             + EAI 
Sbjct: 590 DLIKEAIN 597


>gi|163750570|ref|ZP_02157808.1| flagellar hook protein [Shewanella benthica KT99]
 gi|161329725|gb|EDQ00714.1| flagellar hook protein [Shewanella benthica KT99]
          Length = 455

 Score = 82.2 bits (201), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 36/125 (28%), Positives = 57/125 (45%), Gaps = 5/125 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61
           SFNI L+   A ++ L+T A+N++N +++GF+  + +F++V       N        V +
Sbjct: 2   SFNIALSGIAAAQKDLNTTANNIANVNSIGFKESRAEFADVYANSIFANGKTAVGGGVTT 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESP---RGIILTRDGRFKVTDDGSLVSAS 118
            +       GS   T   LD A+ G  +F   S    +    TR G FKV     LV + 
Sbjct: 62  SQIAQQFHQGSLQFTNNALDLAINGGGFFVTSSELEAKDHSFTRAGAFKVNSADYLVDSQ 121

Query: 119 GKYPV 123
           G Y  
Sbjct: 122 GNYLQ 126



 Score = 62.6 bits (150), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 14/137 (10%), Positives = 39/137 (28%), Gaps = 5/137 (3%)

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
                   +        D  +V      +     +      +     +A + L      Q
Sbjct: 317 NNPTQYASTFEVTELNQDGTTVGRLTNVEVGADGLINASYSNGTTVALARVALARFANEQ 376

Query: 168 GFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222
           G  +  N+    +              +  +++   LE SN +   ++  +I   + F +
Sbjct: 377 GLTQVGNTSWKASQDSGQALAGEANSGTFGSIRSSALEQSNVDLTTQLVNLISAQRNFQA 436

Query: 223 ITTLIDENEKSMLEAIR 239
            +  ++ N       ++
Sbjct: 437 SSRTLEVNNTLQQTILQ 453


>gi|66046707|ref|YP_236548.1| flagellar hook protein FlgE [Pseudomonas syringae pv. syringae
           B728a]
 gi|63257414|gb|AAY38510.1| Flagellar basal body rod protein:Protein of unknown function
           DUF1078:Flagellar basal body FlaE [Pseudomonas syringae
           pv. syringae B728a]
          Length = 442

 Score = 82.2 bits (201), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 52/134 (38%), Gaps = 4/134 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS----FV 59
           SFNIGL+   A  + L    +N++N  T GF++ + +F++             S      
Sbjct: 2   SFNIGLSGLYAANKSLDVTGNNIANVATTGFKSSRAEFADQYAQSIRGTSGNTSVGSGVR 61

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119
            +       +      T   LD A+ GD +F + +    + TR G F    +G +V++S 
Sbjct: 62  TAAVSQQFSQGSLTTGTANSLDLAINGDGFFMMSNNGEKLYTRAGAFHTDKEGYVVNSSN 121

Query: 120 KYPVLDMASVPIQI 133
                        +
Sbjct: 122 MKLQGYNVDANGAV 135



 Score = 63.3 bits (152), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 30/98 (30%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLED 201
             + K +VI    L S    QG  +   +                +  +   +    LE+
Sbjct: 343 YTNGKSQVIGQTSLTSFANVQGLAQAGGTNWRETFASGVPVSGAPQSGTLGYITGQALEE 402

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E+  +I     + +    I      M   I+
Sbjct: 403 SNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQTTIQ 440


>gi|330972413|gb|EGH72479.1| flagellar hook protein FlgE [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 442

 Score = 82.2 bits (201), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 52/134 (38%), Gaps = 4/134 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS----FV 59
           SFNIGL+   A  + L    +N++N  T GF++ + +F++             S      
Sbjct: 2   SFNIGLSGLYAANKSLDVTGNNIANVATTGFKSSRAEFADQYAQSIRGTSGNTSVGSGVT 61

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119
            +       +      T   LD A+ GD +F + +    + TR G F    +G +V++S 
Sbjct: 62  TAAVSQQFSQGSLTTGTANSLDLAINGDGFFMMSNNGEKLYTRAGAFHTDKEGYVVNSSN 121

Query: 120 KYPVLDMASVPIQI 133
                        +
Sbjct: 122 MKLQGYNVDANGAV 135



 Score = 63.0 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 30/98 (30%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLED 201
             + K +VI    L S    QG  +   +                +  +   +    LE+
Sbjct: 343 YTNGKSQVIGQTSLTSFANVQGLAQAGGTNWRETFASGVPVSGAPQSGTLGYITGQALEE 402

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E+  +I     + +    I      M   I+
Sbjct: 403 SNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQTTIQ 440


>gi|330983289|gb|EGH81392.1| flagellar hook protein FlgE [Pseudomonas syringae pv. aptata str.
           DSM 50252]
          Length = 183

 Score = 82.2 bits (201), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 51/132 (38%), Gaps = 4/132 (3%)

Query: 6   NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA----IKNDIDQKISFVAS 61
           NIGL+   A  + L    +N++N  T GF++ + +F++           + +       +
Sbjct: 1   NIGLSGLYAANKSLDVTGNNIANVATTGFKSSRAEFADQYAQSIRGTSGNTNVGSGVRTA 60

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
                  +      T   LD A+ GD +F + +    + TR G F    +G +V++S   
Sbjct: 61  AVSQQFSQGSLTTGTANSLDLAINGDGFFMMSNNGEKLYTRAGAFHTDKEGYVVNSSNMK 120

Query: 122 PVLDMASVPIQI 133
                      +
Sbjct: 121 LQGYNVDANGSV 132


>gi|163802603|ref|ZP_02196495.1| flagellar hook protein E [Vibrio sp. AND4]
 gi|159173686|gb|EDP58505.1| flagellar hook protein E [Vibrio sp. AND4]
          Length = 437

 Score = 82.2 bits (201), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 64/171 (37%), Gaps = 6/171 (3%)

Query: 6   NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGK 63
            + L+   + +  L+T ++N++N +T GF+  + +F +V       N          + +
Sbjct: 3   YVSLSGLSSAQLDLNTTSNNIANANTYGFKESRAEFGDVYSNSLFSNAKTTPGGGAQASQ 62

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWF----ALESPRGIILTRDGRFKVTDDGSLVSASG 119
                  GS I T   +D  + G  +F       +P+   +TR+G F +  D  +V+A+ 
Sbjct: 63  VAQQFHEGSSIYTNNPMDLRISGTGFFSVAKERLTPQQNEMTRNGAFHLNKDNYMVTAND 122

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170
           ++ +              E   +    E  +  +        ++  +    
Sbjct: 123 EFLLGYQVDPDSGEVASYEPQAINIPAEFGKPKQTENIEVGVNLPANADLK 173



 Score = 65.3 bits (157), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 34/98 (34%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP-----PTPLEDLSGVTVKRGFLED 201
             + +   +  + L  V   QG  ++  +                   S  T+  G LE 
Sbjct: 338 YSNGENVTLGRVALVRVPNEQGLDKKGGTQWDSTQNSGAKVWGESNKGSFGTISNGTLEQ 397

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E+  +I   + F + +  ++ + +     ++
Sbjct: 398 SNIDMTQELVDLISAQRNFQANSRALEVDNQLQQNILQ 435


>gi|291276324|ref|YP_003516096.1| flagellar hook subunit protein [Helicobacter mustelae 12198]
 gi|290963518|emb|CBG39349.1| flagellar hook subunit protein [Helicobacter mustelae 12198]
          Length = 705

 Score = 82.2 bits (201), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 60/197 (30%), Gaps = 15/197 (7%)

Query: 12  QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-------------KNDIDQKISF 58
             A +  L   ++N++N +T GF+  +  F +++                  +       
Sbjct: 1   MQAHQVALDVESNNIANVNTTGFKYSRASFVDMISQTKLIATSPHKGGLGGQNDVSVGLG 60

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRFKVTDDGSLVS 116
           V           GS  +T  + D A+EGD +F +     +    TRDG F    +G+LV+
Sbjct: 61  VNVNSTTKVFSQGSTQNTDVKTDLAIEGDGFFIISPDRGKTQNFTRDGEFLFDANGNLVT 120

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
             G      M        +  E            +   I    +     S     R N  
Sbjct: 121 NGGYVVQGWMKDDLRNAEKISEDDFFRVDTTKPIQNIQIDPAMMMPARASSNISLRANLN 180

Query: 177 ISPNIPPTPLEDLSGVT 193
              ++           T
Sbjct: 181 AGRHVDQVANVFALDST 197



 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 16/128 (12%), Positives = 43/128 (33%), Gaps = 5/128 (3%)

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           +       +       +  + +       G  + K   +A + L +   + G      + 
Sbjct: 575 SETYAISQNGYQAGSLVDVRFDSNGSLLGGFSNGKSMALAQVALANFANNTGLQAIGGNV 634

Query: 177 ISPNIPPTPLEDLSGVTVKRGF-----LEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
            S +         +  T +RG      LE SN +    + Q+I + + F + +  +  ++
Sbjct: 635 FSTSGNSGDPIIGAANTGRRGSVNGSKLEMSNVDLSRSLTQLIVVQRGFQANSKAVTTSD 694

Query: 232 KSMLEAIR 239
           + +   + 
Sbjct: 695 QILNTLLS 702


>gi|83719411|ref|YP_440801.1| flagellar hook protein FlgE [Burkholderia thailandensis E264]
 gi|167617585|ref|ZP_02386216.1| flagellar hook protein FlgE [Burkholderia thailandensis Bt4]
 gi|257140548|ref|ZP_05588810.1| flagellar hook protein FlgE [Burkholderia thailandensis E264]
 gi|83653236|gb|ABC37299.1| flagellar hook protein FlgE [Burkholderia thailandensis E264]
          Length = 413

 Score = 82.2 bits (201), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 61/189 (32%), Gaps = 2/189 (1%)

Query: 8   GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVASGKEY 65
           GL+        L  + +N++N +TVGF+    +FS++          +            
Sbjct: 6   GLSGLAGASSDLDVIGNNIANANTVGFKGSTAQFSDMYANSVASAVNNPIGIGTMLASVQ 65

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125
                G+  S+ + L+ A+ G+ +F + +   +  +RDG F+   +G +V++ G   +  
Sbjct: 66  QQFSQGTITSSTSSLNVAINGNGFFQMSNNGVLTYSRDGTFQRDKNGYIVNSQGLNLMGY 125

Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185
            A     I     +        I+       T                 +          
Sbjct: 126 QADKNGVINPAQTVPLQAPTNNIAPTATTKITGQFNLNSQDTVPTNTPFNYTDSTTYNFQ 185

Query: 186 LEDLSGVTV 194
                  ++
Sbjct: 186 TAVQVYDSL 194



 Score = 65.7 bits (158), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 26/212 (12%), Positives = 58/212 (27%), Gaps = 9/212 (4%)

Query: 34  FRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE 93
           F        E    +KN     +  V        K        G+       G   F++ 
Sbjct: 204 FVKSAAGTWEAYAGVKNQTPTDLGTVTFDTSGAIKSTTLP---GSTTPTTTLGQFQFSIP 260

Query: 94  SPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ-KG 152
           +  G    +  +  +T         G   +         +       +    G  S  + 
Sbjct: 261 NTDGSATPQALKLDLTGTTQYGGKDGVTNLAQDGFASGTLTTFSIGNDGKVTGNYSNGQT 320

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSM 207
             +  + L + +   G V   N+           +       +  T++   LE+SN +  
Sbjct: 321 ATLGQIVLANFNNPNGLVNVGNNQYVETAASGVPQISAPGSTNHGTLQGSALENSNVDLT 380

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            ++ ++I   + + +    I   +      I 
Sbjct: 381 SQLVKLITAQRNYQANAQTIKTQQTVDQTLIN 412


>gi|313681187|ref|YP_004058925.1| flagellar hook-basal body protein [Sulfuricurvum kujiense DSM
           16994]
 gi|313154047|gb|ADR32725.1| flagellar hook-basal body protein [Sulfuricurvum kujiense DSM
           16994]
          Length = 445

 Score = 82.2 bits (201), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 40/199 (20%), Positives = 70/199 (35%), Gaps = 17/199 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA------IKNDIDQ 54
           M   +  G++   A +  L  +ADN++NT+TVGFR    +F+ +              D+
Sbjct: 1   MTQGYYTGISGIQANQYGLDVIADNLANTNTVGFRGSSTEFASLFSEKLVSSGSAPTYDE 60

Query: 55  KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDD--- 111
             +        ++ + GS ++T    D A+ G+ WF + S +    TR G F + +    
Sbjct: 61  IGAGTRLQATTMNTQNGSLLNTDRFNDLAINGNGWFGVVSGQDRYFTRAGNFVLDEYQKT 120

Query: 112 --------GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
                   G L +  G Y    M +      Q +           + K          + 
Sbjct: 121 DGAANSSVGRLTTTEGMYVTGTMLNNFAYDSQYNYSAKSDVTDTGAFKITASLNTVPLTD 180

Query: 164 DMSQGFVRRENSGISPNIP 182
              QG +        P  P
Sbjct: 181 ANEQGPIELPTRLAYPTEP 199



 Score = 66.4 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 38/97 (39%), Gaps = 8/97 (8%)

Query: 151 KGKVIATMGLYSVDMSQGFVRR--------ENSGISPNIPPTPLEDLSGVTVKRGFLEDS 202
           K   I  + +Y     QG  R         +NSG          E ++G T+  G LE+S
Sbjct: 346 KQSTIGRIAVYHFQNDQGLTRSGSTLFSQSDNSGNPMFWTDANGEAVTGTTISSGHLENS 405

Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           N      +  MI + + + +    +   ++ + +A+ 
Sbjct: 406 NVRMEVGLTDMIVMQRAYQANAKTVTTVDEMIQKALS 442


>gi|323174793|gb|EFZ60408.1| flagellar basal-body rod protein flgG domain protein [Escherichia
          coli LT-68]
          Length = 79

 Score = 82.2 bits (201), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 24/56 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56
          M +S  I      A +  +  +A+N++N  T GF+  +  F +++         + 
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQS 56


>gi|319898656|ref|YP_004158749.1| flagellar hook protein FlgE [Bartonella clarridgeiae 73]
 gi|319402620|emb|CBI76165.1| Flagellar hook protein FlgE [Bartonella clarridgeiae 73]
          Length = 402

 Score = 82.2 bits (201), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 44/195 (22%), Positives = 68/195 (34%), Gaps = 5/195 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M      G++   A   RLS VADN++N  TVG++   V+FS  V             V 
Sbjct: 6   MMR---TGVSGMNAQGTRLSGVADNVANAGTVGYKRTNVQFSNYVTP-SGQYAYVPGGVK 61

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           S   +     G   +TG   D  + G+ +F +        LTR G F    DG L + +G
Sbjct: 62  SHIGHDISISGPAHATGRSGDAMIHGNGFFRVADENGKEFLTRAGSFTRDKDGYLRNTAG 121

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
            Y + +            ++F      +I  K     +  +   +  Q   +   S    
Sbjct: 122 YYLLNEDGERIQIKGGPTDLFGPEVTTKIDFKANFNPSAKVMEPEGGQIDPKDPKSYNQK 181

Query: 180 NIPPTPLEDLSGVTV 194
               T       V V
Sbjct: 182 KSMTTYDSQGKKVQV 196



 Score = 76.1 bits (185), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 51/167 (30%), Gaps = 11/167 (6%)

Query: 84  LEGDAWFALESPRGIILTRDGRFKVTDDG--SLVSASGK----YPVLDMASVPIQIPQKD 137
           +E    F L  P     T +        G  SLV+  G         D            
Sbjct: 233 IEPTKEFKLTLPDSEGKTFEVDVNFGGVGADSLVTQKGNLFAFEAEADGMESGAFDGFTF 292

Query: 138 EIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV----- 192
                 E    +QK +++  +G+ +V   +       S    N                 
Sbjct: 293 GKNGEIEVMYSNQKTRIVGYVGITTVASPESLTFLGGSVFETNSQTGAQMMGRPGDGVFG 352

Query: 193 TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           T+  G+LEDSN +   E+  MI   + + + + +     + M   + 
Sbjct: 353 TLSSGYLEDSNVDMGDELTDMIEAQRNYTANSKVFQTGSELMDVIVN 399


>gi|295690742|ref|YP_003594435.1| fagellar hook-basal body protein [Caulobacter segnis ATCC 21756]
 gi|295432645|gb|ADG11817.1| fagellar hook-basal body protein [Caulobacter segnis ATCC 21756]
          Length = 587

 Score = 82.2 bits (201), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 57/135 (42%), Gaps = 7/135 (5%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
            ++   G++  +A    L+ ++DN++N +TVG++     FS +V +   +       V +
Sbjct: 4   NSAMLAGVSGLVANSSALAAISDNIANVNTVGYKRSSSNFSTLVTSGSKNQTYSAGGVKA 63

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-------LTRDGRFKVTDDGSL 114
                  + G   ST + LD ++ G  +F        +        TR G F++   G L
Sbjct: 64  QTHQFISQQGLTQSTTSNLDLSISGSGFFVATEKPENLTAADTRSFTRAGSFQLDSLGYL 123

Query: 115 VSASGKYPVLDMASV 129
            + +G Y    +A  
Sbjct: 124 RNDAGLYLQGWLADP 138



 Score = 76.8 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 11/90 (12%), Positives = 29/90 (32%), Gaps = 5/90 (5%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLEDSNANSMYE 209
           IA + + +     G      +              P       ++    LE S  +   E
Sbjct: 495 IAQVAVATFSNPNGLKGVNGNAYRVTNESGTYSLKPPGQGGAGSLAPSTLEASTVDLSTE 554

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              +I   + +++ + +I   ++ + E + 
Sbjct: 555 FTGLITTQRAYSASSKIITTADQMLEELLN 584


>gi|34498340|ref|NP_902555.1| flagellar hook protein flgE [Chromobacterium violaceum ATCC 12472]
 gi|34104194|gb|AAQ60553.1| flagellar hook protein flgE [Chromobacterium violaceum ATCC 12472]
          Length = 416

 Score = 81.8 bits (200), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 38/194 (19%), Positives = 76/194 (39%), Gaps = 3/194 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61
            F  GL+   A   +L ++ +N++N +TVGF++ + +F ++          +   + V+ 
Sbjct: 2   GFQQGLSGINAASVQLDSIGNNVANANTVGFKSSRTEFGDLYAQSIFGTAANSPGNGVSV 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGK 120
                +   G+  +TG  LD A+  + +F +  P G    +RDG+F+V   G LV++ G 
Sbjct: 62  LAVTANMSAGNTENTGRSLDLAINNNGFFIMNQPNGTQTYSRDGQFQVNSQGYLVNSYGA 121

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
           Y      +   Q               IS +     +  +     +   V    +   P 
Sbjct: 122 YLQGYGVNTSGQPQVGPLQNLQITNTTISPQATSQISWPVQLNSNATVPVNSPVNPTDPT 181

Query: 181 IPPTPLEDLSGVTV 194
               P   +   ++
Sbjct: 182 TYNWPSPTVVYDSL 195



 Score = 71.8 bits (174), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 17/135 (12%), Positives = 42/135 (31%), Gaps = 5/135 (3%)

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169
            +    +        + ++  +          V +    + + K +  + L +    QG 
Sbjct: 281 SNQIAQNYGTGTITQNGSAPGLLTGVSIASNGVVQATFSNSQTKTLGQVALATFVNPQGL 340

Query: 170 VRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224
           +    +    +    P         +  T+  G +EDSN N   E+  MI   + + +  
Sbjct: 341 LNLGGNQWQQSGNSGPATVNQPGTGNAGTLTAGSVEDSNVNLTNELVNMITAQRYYQANA 400

Query: 225 TLIDENEKSMLEAIR 239
             I   +  +   + 
Sbjct: 401 QTIKTQDTLIQTLLN 415


>gi|90423517|ref|YP_531887.1| hypothetical protein RPC_2013 [Rhodopseudomonas palustris BisB18]
 gi|90105531|gb|ABD87568.1| protein of unknown function DUF1078-like [Rhodopseudomonas
           palustris BisB18]
          Length = 464

 Score = 81.8 bits (200), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 68/195 (34%), Gaps = 13/195 (6%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           + N  ++   A    +  ++ N++N  T GF+ I   F+++V   +         V +  
Sbjct: 6   AINTAISGMAAQSYAIGNISGNIANAHTPGFKRIDTSFADLVS-NQGPKRTLAGPVLAEA 64

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPR----GIILTRDGRFKVTDDGSLVSASG 119
            + +   G   +TG   + A+ G  +F +          + TR G F V   G LV+ +G
Sbjct: 65  RFTTSVQGPLTATGVGTNMAINGSGFFTVMQRESGSAQSVYTRRGDFAVDKQGYLVNGTG 124

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
            Y + +                V   G I      +       +D +    +   +  S 
Sbjct: 125 GYLLGNNLDP--------VSGRVTSSGLIKIANTTLPGRQTTRIDYAANLPKVPTTTASV 176

Query: 180 NIPPTPLEDLSGVTV 194
               +P    S V +
Sbjct: 177 GGDSSPYTVASAVVI 191



 Score = 67.6 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 16/128 (12%), Positives = 43/128 (33%), Gaps = 1/128 (0%)

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
           + +      D  +                    ++    +AT G+ +     G       
Sbjct: 337 TVTTNALAQDGYASGSLKSLSVSGDGTIVGSFSNEMTASVATAGVVNFMNPNGLRPTSGG 396

Query: 176 GISPN-IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
               +     PL  L+G T+  G +E SN++   +  +++   Q +++   ++    + M
Sbjct: 397 NYEQSRDSGAPLAGLNGGTIVGGNIEGSNSDVAGQFSKLVATQQAYSANVKVMTTANQMM 456

Query: 235 LEAIRNIA 242
            + +  + 
Sbjct: 457 ADLLNAVR 464


>gi|217976240|ref|YP_002360387.1| flagellar hook protein FlgE [Methylocella silvestris BL2]
 gi|217501616|gb|ACK49025.1| flagellar basal body FlaE domain protein [Methylocella silvestris
           BL2]
          Length = 414

 Score = 81.8 bits (200), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 35/118 (29%), Positives = 62/118 (52%), Gaps = 2/118 (1%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
           ++    ++   A   +LSTV+DN++N+DT G++    +F  ++           S VA+ 
Sbjct: 5   SALTASVSGMAAQANKLSTVSDNIANSDTTGYKQAMTEFENLISQ-AGTSSYNASGVATV 63

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWF-ALESPRGIILTRDGRFKVTDDGSLVSASG 119
             Y   E G+  ST +  D A++G+ +F   ++   + LTR G FK    G+LV+A+G
Sbjct: 64  VRYNISEHGNLKSTTSSTDLAIQGNGFFLVGDANGSVFLTRAGNFKPDATGNLVNAAG 121



 Score = 62.2 bits (149), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 12/75 (16%), Positives = 27/75 (36%), Gaps = 1/75 (1%)

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
            G V  +NS   P +   P       +++   LE S  +   ++  MI   + + S + +
Sbjct: 340 AGDVFSDNSLSGPILVGDPG-LGGFGSIQSEKLESSTVDLASQLTDMIVAQRSYESNSKV 398

Query: 227 IDENEKSMLEAIRNI 241
                + +      +
Sbjct: 399 FQTGSELLSTLNNML 413


>gi|167835111|ref|ZP_02461994.1| flagellar hook protein FlgE [Burkholderia thailandensis MSMB43]
          Length = 413

 Score = 81.8 bits (200), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 61/189 (32%), Gaps = 2/189 (1%)

Query: 8   GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVASGKEY 65
           GL+        L  + +N++N +TVGF+    +FS++          +            
Sbjct: 6   GLSGLAGASSNLDVIGNNIANANTVGFKGSTAQFSDMYANSVASAVNNPIGIGTMLASVQ 65

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125
                G+  S+ + L+ A+ G+ +F + +   +  +RDG F+   +G +V++ G   +  
Sbjct: 66  QQFSQGTITSSTSSLNVAINGNGFFQMSNNGVLTYSRDGTFQRDKNGYIVNSQGLSLMGY 125

Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185
            A     I     +        ++       +             +              
Sbjct: 126 QADKNGVINTAQTVPLQAPTNNMAPTATTRISGQFNLNSQDTVPTKTPFDYADSTTYNFQ 185

Query: 186 LEDLSGVTV 194
                  ++
Sbjct: 186 TAVQVYDSL 194



 Score = 66.8 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/212 (12%), Positives = 56/212 (26%), Gaps = 9/212 (4%)

Query: 34  FRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE 93
           F        E    +KN     +  V        K        G+       G   F++ 
Sbjct: 204 FVKSAAGTWEAYAGVKNQTPTDLGTVTFDTSGAIKSTTL---AGSTTPTTTLGQFQFSIP 260

Query: 94  SPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ-KG 152
           +  G    +     +T         G   +         +       +    G  S  + 
Sbjct: 261 NTDGSATPQALTLDLTGTTQYGGKDGVTNLAPDGFASGTLTTFTIGNDGKLTGNYSNGQT 320

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSM 207
             +  + L + +   G V   N+           +       +  T++   LE+SN +  
Sbjct: 321 ATLGQIVLANFNNPNGLVNIGNNQYVETAASGVPQISAPGSTNHGTLQGSALENSNVDLT 380

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            ++  +I   + + +    I   +      I 
Sbjct: 381 SQLVNLITAQRNYQANAQTIKTQQAVDQTLIN 412


>gi|312115280|ref|YP_004012876.1| flagellar hook-basal body protein [Rhodomicrobium vannielii ATCC
           17100]
 gi|311220409|gb|ADP71777.1| flagellar hook-basal body protein [Rhodomicrobium vannielii ATCC
           17100]
          Length = 413

 Score = 81.8 bits (200), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 35/128 (27%), Positives = 54/128 (42%), Gaps = 2/128 (1%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
            N   +   A    LSTVADN++N  T G++    +FS +V +      Q    V     
Sbjct: 7   LNTSASGMAAQSTALSTVADNIANVSTTGYKRASTEFSTLVASSGAGNYQSG-GVDVDTR 65

Query: 65  YLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGKYPV 123
                     ST +  D A++G+ +F +  P G   LTR G F+   DG+L +A+G   +
Sbjct: 66  VAIGSQSGTTSTSSSTDLAVDGNGFFIVSGPNGTPALTRAGSFEKQADGTLENAAGYTLL 125

Query: 124 LDMASVPI 131
                   
Sbjct: 126 GYPVGTTP 133



 Score = 55.6 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 13/90 (14%), Positives = 27/90 (30%), Gaps = 5/90 (5%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYE 209
             T+ L  V           +   PN     ++          T+    LE+S+ +   E
Sbjct: 321 AYTIPLAMVASPDNMTVISGNAYLPNQDSGSVQIGTAGTNGFGTIGSYTLENSDVDLATE 380

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           + +MI     + S   +       +   + 
Sbjct: 381 LTRMIQSQNIYQSNAKVFQTGSDLLKVLVN 410


>gi|332284019|ref|YP_004415930.1| hypothetical protein PT7_0766 [Pusillimonas sp. T7-7]
 gi|330427972|gb|AEC19306.1| hypothetical protein PT7_0766 [Pusillimonas sp. T7-7]
          Length = 412

 Score = 81.8 bits (200), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 32/135 (23%), Positives = 62/135 (45%), Gaps = 7/135 (5%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
            F  GL+   A  Q L  + +N++N+ TVGF+     F++V  + +  +  +++ +    
Sbjct: 2   GFGQGLSGLNAAAQNLDVIGNNIANSGTVGFKAGTASFADVYASSRVGLGTQVASIN--- 58

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPR--GIILTRDGRFKVTDDGSLVSASGKY 121
                 +GS  +TG + D A++G +     +     ++ TR+G+F    DG LV+A G  
Sbjct: 59  --QRFTIGSVSNTGNQFDMAIDGASGLFRVTDPSGSVLYTRNGQFSPDKDGYLVNAQGHR 116

Query: 122 PVLDMASVPIQIPQK 136
                      +P +
Sbjct: 117 LTGYEEGGTNLVPIR 131



 Score = 77.2 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 55/210 (26%), Gaps = 10/210 (4%)

Query: 35  RTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES 94
           +      S           Q +S    G   ++ + G  ++       A++  A      
Sbjct: 206 KREGTATSSTWDVYYRIGGQTVSAPLDGATQMTFDQGGRLTAP-TTPVAVQMTAVPGASP 264

Query: 95  PRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV 154
              +  T D        G    + G+          + I     I      GE    G +
Sbjct: 265 AEALNFTVDYADSTQFGGDFAFSFGQDGYPTGEYASMAIAADGSIVASYTNGETQTMGSL 324

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYE 209
           +    L      QG      +                       +K   +E+SN +   E
Sbjct: 325 V----LVDFANVQGLQPVGGNAWVETSTSGQPILGRPGSNGMARIKGQAVEESNVDMSQE 380

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +  MI   + + +    I   ++ M   I 
Sbjct: 381 LVNMIIAQRTYQANAQTIKTQDQIMQTLIS 410


>gi|260774938|ref|ZP_05883839.1| flagellar hook protein FlgE [Vibrio coralliilyticus ATCC BAA-450]
 gi|260609193|gb|EEX35351.1| flagellar hook protein FlgE [Vibrio coralliilyticus ATCC BAA-450]
          Length = 434

 Score = 81.8 bits (200), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 56/129 (43%), Gaps = 6/129 (4%)

Query: 6   NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGK 63
            + L+   A +  L+T ++N++N +T GF+  + +F +V       +        V + K
Sbjct: 3   YVALSGLSAAQLDLNTTSNNIANANTYGFKESRAEFGDVYSNSLFTHAKTTPGQGVQAAK 62

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWF----ALESPRGIILTRDGRFKVTDDGSLVSASG 119
                  GS I T   +D  + G  +F       +P    LTR+G F +  D  + +A+ 
Sbjct: 63  VAQQFHEGSSIYTNNPMDLRVSGTGFFAVAKDRLAPTTNELTRNGAFHLNKDNYMTTAND 122

Query: 120 KYPVLDMAS 128
           ++ +    +
Sbjct: 123 EFLLGYQVN 131



 Score = 65.3 bits (157), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 13/98 (13%), Positives = 36/98 (36%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI-----PPTPLEDLSGVTVKRGFLED 201
             + +  ++  + L  V   QG  ++  +                   S  T+  G LE 
Sbjct: 335 YSNGENIILGRVALVRVPNEQGLDKKGGTQWDSTQFSGNKIWGESNKGSFGTISSGVLEQ 394

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +N +   E+  +I   + F + +  ++ + ++    ++
Sbjct: 395 ANIDMTQELVDLISAQRNFQANSRSLEVHNQTQQNILQ 432


>gi|46203395|ref|ZP_00051590.2| COG1749: Flagellar hook protein FlgE [Magnetospirillum
           magnetotacticum MS-1]
          Length = 293

 Score = 81.8 bits (200), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 65/181 (35%), Gaps = 1/181 (0%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
              G++   A   R+STVA+N+ N +T G++    +FS ++    +        V +   
Sbjct: 7   LRTGVSGMNAQSNRISTVAENIQNANTTGYKRTSAEFSSLLLDSGDVGTYNSGAVETTLR 66

Query: 65  YLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYPV 123
               E G   ST ++ D A++G+ +F +        LTR G F V      +  +G + +
Sbjct: 67  RSIGERGPISSTNSDKDLAIQGNGFFVVRDESGAPFLTRAGNFVVDGKSGNLVNAGGFTL 126

Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183
           L  +                +   ++  G+        +V  +  +        +     
Sbjct: 127 LGYSLANGAPNPVLNGVADLKPVNVNVMGQEARPSTNATVSGNLSYETPVYDPTAAGAIG 186

Query: 184 T 184
            
Sbjct: 187 Y 187


>gi|167568107|ref|ZP_02361023.1| flagellar hook protein FlgE [Burkholderia oklahomensis EO147]
 gi|167574225|ref|ZP_02367099.1| flagellar hook protein FlgE [Burkholderia oklahomensis C6786]
          Length = 413

 Score = 81.8 bits (200), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 65/201 (32%), Gaps = 6/201 (2%)

Query: 8   GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVASGKEY 65
           GL+        L  + +N++N +TVGF+    +F+++          +            
Sbjct: 6   GLSGLAGASSDLDVIGNNIANANTVGFKGSTAQFADMYANSVASAVNNPIGIGTMLASVQ 65

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125
                G+  S+ + L+ A+ G+ +F + +   +  +RDG F+   +G +V++ G   +  
Sbjct: 66  QQFSQGTITSSTSSLNVAINGNGFFQMSNNGVVTYSRDGTFQRDKNGYIVNSQGLNLMGY 125

Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185
            A     I     +        I+       T                 +   P      
Sbjct: 126 AADANGVINSAATVPLQAPTTNIAPTATSKITGQFNLNSQDAVPATTPFNYSDPTSYNYT 185

Query: 186 LEDLSGVTVKRGFLEDSNANS 206
               +  ++        N N 
Sbjct: 186 TSVQAFDSLGGSQ----NVNL 202



 Score = 64.9 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 12/98 (12%), Positives = 33/98 (33%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLED 201
             + +   +  + L + +   G V   N+           +       +  T++   LE+
Sbjct: 315 YSNGQTSTLGQIVLANFNNPNGLVSVGNNQYVETAASGVPQISAPGSTNHGTLQGSALEN 374

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   ++ ++I   + + +    I   +      I 
Sbjct: 375 SNVDLTSQLVKLITAQRNYQANAQTIKTQQTVDQTLIN 412


>gi|319405421|emb|CBI79040.1| Flagellar hook protein FlgE [Bartonella sp. AR 15-3]
          Length = 402

 Score = 81.5 bits (199), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 35/127 (27%), Positives = 51/127 (40%), Gaps = 5/127 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M      G++   A   RLS VADN++N  TVG++   V+FS  V             V 
Sbjct: 6   MMR---TGVSGMNAQGTRLSGVADNVANVGTVGYKRTNVQFSNYVTP-SGQYAYVPGGVK 61

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           S   +     G   +TG   D  + G  +F +        LTR G F     G L + +G
Sbjct: 62  SHIGHDISISGPAHATGRSGDVMIHGSGFFRVADENGKEFLTRAGSFTRDKGGYLRNTAG 121

Query: 120 KYPVLDM 126
            Y + + 
Sbjct: 122 YYLLNED 128



 Score = 77.2 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 51/167 (30%), Gaps = 11/167 (6%)

Query: 84  LEGDAWFALESPRGIILTRDGRFKVTDDG--SLVSASGK----YPVLDMASVPIQIPQKD 137
           +E    F L  P     T +        G  SLV+  G         D            
Sbjct: 233 IEPTEEFKLTLPDSEGETFEVDVNFGGVGADSLVTQKGNLFAFEAEADGMESGAFDGFTF 292

Query: 138 EIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV----- 192
                 E    +QK ++I  +G+ +V   +       S    N                 
Sbjct: 293 GKNGEIEVMYSNQKTRIIGYVGMTTVASPESLTFLGGSVFETNSQTGAQMMGRPGDGVFG 352

Query: 193 TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           T+  G+LEDSN +   E+  MI   + + + + +     + M   + 
Sbjct: 353 TLSSGYLEDSNVDIGDELTDMIEAQRNYTANSKVFQTGSELMDVIVN 399


>gi|197104253|ref|YP_002129630.1| flagellar hook protein FlgE [Phenylobacterium zucineum HLK1]
 gi|196477673|gb|ACG77201.1| flagellar hook protein FlgE [Phenylobacterium zucineum HLK1]
          Length = 452

 Score = 81.5 bits (199), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 64/169 (37%), Gaps = 7/169 (4%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
              G++  +A    L+ ++DN++N +TV ++  +V F+ VV A           V S   
Sbjct: 1   MLAGVSGLVANSSALAAISDNIANVNTVAYKRNQVNFANVVTAQAVKGKYSAGGVQSVTR 60

Query: 65  YLSKEVGSFISTGTELDFALEGDAWFALES-------PRGIILTRDGRFKVTDDGSLVSA 117
               + G   ++ +  D A+ GD +F + +             TR G F V  DG +V+ 
Sbjct: 61  QFVSQQGLIQASNSTTDLAISGDGFFVVANKGLGLTGADPRSFTRSGAFAVDSDGYMVND 120

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           +G Y                   ++ +   +   G  +A      V  +
Sbjct: 121 AGLYLQGWPVQADGTFNVNPSDLSLMQSINVKNLGSAVAPTTELGVTAN 169



 Score = 72.6 bits (176), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 40/120 (33%), Gaps = 5/120 (4%)

Query: 125 DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT 184
           + A V   I    +   V      + + + IA +G+ +            +   P IP  
Sbjct: 330 NGAGVGNVIAIDVDPEGVVSAVYDNSQIRKIAKIGVATFPNPDALAAVSGNAYRPTIPAG 389

Query: 185 PLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +            +    LE S  +   E   +I   + +++ + +I   ++ + E I 
Sbjct: 390 EMTVKEAGIGGAGKISPSSLEASTVDLSAEFTGLIATQKAYSASSKIITTADQMLEELIN 449


>gi|226327742|ref|ZP_03803260.1| hypothetical protein PROPEN_01615 [Proteus penneri ATCC 35198]
 gi|225203446|gb|EEG85800.1| hypothetical protein PROPEN_01615 [Proteus penneri ATCC 35198]
          Length = 111

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 12/96 (12%), Positives = 33/96 (34%), Gaps = 5/96 (5%)

Query: 149 SQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSN 203
           S   + +  + L +     G      +            + +        + +G++E SN
Sbjct: 15  SPAPQQVGQLTLTTFINDSGLESVGENLYLETASSGAPTENAPGINGAGLLYQGYVETSN 74

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            N   E+  MI   + +   +  I  +++ + +  +
Sbjct: 75  VNVAEELVNMIQTQRAYEINSKAISTSDQMLQKLTQ 110


>gi|150019072|ref|YP_001311326.1| hypothetical protein Cbei_4260 [Clostridium beijerinckii NCIMB
           8052]
 gi|149905537|gb|ABR36370.1| protein of unknown function DUF1078 domain protein [Clostridium
           beijerinckii NCIMB 8052]
          Length = 363

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/231 (13%), Positives = 68/231 (29%), Gaps = 38/231 (16%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M      G++     + +L  + +N++N  T  F++   +F +++    ++         
Sbjct: 1   MLRCMYSGISGMKVNQTKLDVIGNNIANVGTTAFKSSSARFKDMLYQNASEATAPTSVLG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR------------ 96
                Q                G+ +STG  LD  ++GD +  +                
Sbjct: 61  GTNAKQIGLGAQVSSINKVMGQGNALSTGRSLDVCIDGDGYLVVAKGDLNSGIGANQSTG 120

Query: 97  --------------GIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNV 142
                           + TRDG   +   G+L++A G   +    +        D   ++
Sbjct: 121 APDTAATDATGEISETLFTRDGNLTLDYQGNLLTADGHRVMGYYLTASKNDGGTDNAKSL 180

Query: 143 GEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT 193
                 +             + +S   +R      S  I  TP    +   
Sbjct: 181 TYDSTNNVINANYVNADSKQLTVSDSTMRPLVIPDSVTISGTPGAADAVTQ 231



 Score = 73.0 bits (177), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 14/104 (13%), Positives = 32/104 (30%), Gaps = 20/104 (19%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPL--------------------EDLSGVTV 194
           I  + + S    +G      +    +    P+                          ++
Sbjct: 256 IGQIAMASFKNPEGLTDLGGNMCVNSSNSGPIVYKTGKVDTSTSSSTTTATGNQGGFGSL 315

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            +G LE SN +   +   MI  T+ F + + +I   ++ +    
Sbjct: 316 IQGALEGSNVDLTEQFTDMITATRSFQAASKMITTGDEILQTIT 359


>gi|16125154|ref|NP_419718.1| flagellar hook protein [Caulobacter crescentus CB15]
 gi|221233884|ref|YP_002516320.1| flagellar hook protein FlgE [Caulobacter crescentus NA1000]
 gi|6226612|sp|P35806|FLGE_CAUCR RecName: Full=Flagellar hook protein flgE
 gi|3493243|gb|AAC33329.1| flagellar hook protein [Caulobacter crescentus CB15]
 gi|13422168|gb|AAK22886.1| flagellar hook protein [Caulobacter crescentus CB15]
 gi|220963056|gb|ACL94412.1| flagellar hook protein FlgE [Caulobacter crescentus NA1000]
          Length = 591

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 73/213 (34%), Gaps = 8/213 (3%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
            ++   G++  +A    L+ ++DN++N +TVGF+     FS +V +   +       V +
Sbjct: 4   NSAMLAGVSGLIANSSALAAISDNIANVNTVGFKRSTSNFSTLVTSGNKNQTYSAGGVKA 63

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-------LTRDGRFKVTDDGSL 114
                  + G   ST + LD ++ G  +F        +        TR G F++ + G L
Sbjct: 64  QTHQFISQQGLTQSTTSNLDISISGAGFFVTTEKPENLTATDTRSFTRAGSFQLDNLGYL 123

Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174
            + +G Y    +A     +   D    +             A      V ++      + 
Sbjct: 124 RNDAGLYLQGWLADPVSGLITPDPSDLMQLASINVGSVGGTAEK-TTRVGVNANLRSEQP 182

Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSM 207
              + +         S   V        N + +
Sbjct: 183 VAAAVSYKVGTAGSPSKTNVVDSATNSHNYDVV 215



 Score = 72.6 bits (176), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 10/90 (11%), Positives = 27/90 (30%), Gaps = 5/90 (5%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLEDSNANSMYE 209
           IA + + +     G      +                       +    LE S  +   E
Sbjct: 499 IAQVAIATFSNPNGLKGVNGNAYRVTNESGTYSLKAPSQGGAGALAPSTLEASTVDLSQE 558

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              +I   + +++ + +I   ++ + E + 
Sbjct: 559 FTGLITTQRAYSASSKIITTADQMLEELLN 588


>gi|149927798|ref|ZP_01916049.1| flagellar hook protein E [Limnobacter sp. MED105]
 gi|149823420|gb|EDM82651.1| flagellar hook protein E [Limnobacter sp. MED105]
          Length = 437

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/151 (23%), Positives = 65/151 (43%), Gaps = 4/151 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK---ISFVA 60
           SF  GL+   A ++ L  +A+N+SN   VGF+  + +FS+V     N            +
Sbjct: 8   SFQQGLSGLNAAQRGLEVIANNVSNASVVGFKGSEAEFSDVFARAFNGARSTNGIGLGTS 67

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
                 + + G+   TG  LD A+ G  +F +++     I TR+G+F + ++G +V++ G
Sbjct: 68  LAAVTQNFKQGNINVTGNPLDLAISGTGFFKVQAGNGDNIYTRNGQFTLNNEGVIVNSRG 127

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQ 150
                         P       +  +G I  
Sbjct: 128 DKLQGFPVDAATGRPSDVAQDILVPRGSIPP 158



 Score = 77.6 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 22/177 (12%), Positives = 48/177 (27%), Gaps = 9/177 (5%)

Query: 68  KEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMA 127
                 ++          G  + +  +                   +V   G+       
Sbjct: 263 TPNSGNLTVDMSRFVTASGVPFSSTGTAPNQFTFDMSNTTQYGSSFVVQNLGQDGFESSP 322

Query: 128 SVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPL- 186
                +     +      G++       A +GLY     +G     ++G        P  
Sbjct: 323 FAGFDVGADGMLTISYANGQLVNH----AQIGLYRFPNPEGLQPVGSNGWLATNSSGPEL 378

Query: 187 ----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
               ED +   ++ G LE+SN +   E+  MI   + + + +  I   +        
Sbjct: 379 VSLSEDTAFGIIQSGALEESNIDLTAELVAMISAQRVYQANSQTIKTQDSIFQTITN 435


>gi|254503336|ref|ZP_05115487.1| Flagellar basal body protein FlaE [Labrenzia alexandrii DFL-11]
 gi|222439407|gb|EEE46086.1| Flagellar basal body protein FlaE [Labrenzia alexandrii DFL-11]
          Length = 421

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 5/126 (3%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
              G++   A   +L  VADN++N+ T G++  + +F+  V A           V +  +
Sbjct: 1   MRTGVSGMNAQSSKLGAVADNIANSSTTGYKRAETEFASQVLAQGGGSYNSG-GVQAHTK 59

Query: 65  YLSKEVGSFISTGTELDFALEGDAWFALES----PRGIILTRDGRFKVTDDGSLVSASGK 120
           Y   + GS   T ++LD A++G+ +F +           LTR G F     G LV+ +G 
Sbjct: 60  YAISDQGSMSFTTSKLDLAVDGNGFFIVSDSTGAGASQALTRAGSFVPDGQGYLVNTAGM 119

Query: 121 YPVLDM 126
           Y     
Sbjct: 120 YLQGYP 125



 Score = 69.1 bits (167), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 9/138 (6%)

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
             TD G  V+          +   ++  +   ++++   G+     + I  + L  V   
Sbjct: 285 TYTDAGFTVTNVDADGNAPSSVEKVEFGEDGTLYSIYTNGDR----RPIYKIPLADVPSP 340

Query: 167 QGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221
                   +   P+I           D     +  G LE SN +   E+  MI   + + 
Sbjct: 341 DKLDPVSGNIYRPSIDSGDVRVGFPGDGGLGELAVGALEGSNVDLANELTSMIESQRTYT 400

Query: 222 SITTLIDENEKSMLEAIR 239
           + + +       M E + 
Sbjct: 401 ANSQVFKAGSDLMQELVN 418


>gi|224373466|ref|YP_002607838.1| flagellar basal body and hook protein [Nautilia profundicola AmH]
 gi|223589855|gb|ACM93591.1| flagellar basal body and hook protein [Nautilia profundicola AmH]
          Length = 642

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 51/125 (40%), Gaps = 3/125 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID---QKIS 57
           M TSF  G+    + +  +    DN++N +T G++    +FS +     N          
Sbjct: 1   MTTSFYNGITGLKSFQYGIDIWGDNIANINTTGYKEQIPEFSTLFSETLNSDPVYSDIGM 60

Query: 58  FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSA 117
                   ++ + GS I+T    D ++ G+ W A++       TR G F     G LV  
Sbjct: 61  GSKLSSTAINLDQGSLINTDNPFDVSINGEGWLAVKRYNDTYYTRTGSFTRDAQGYLVDD 120

Query: 118 SGKYP 122
           +G Y 
Sbjct: 121 NGDYL 125



 Score = 64.5 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 18/144 (12%), Positives = 44/144 (30%), Gaps = 8/144 (5%)

Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162
              F +T       A+      +          + +     +    + +  V+  + +Y 
Sbjct: 494 TLNFNMTSYAKTDLATSYSFTQNGVEEGFLKNYQIDQNGQIQALFSNGQMSVLGQIPVYH 553

Query: 163 VDMSQGFVRRENSGISPNIPP--------TPLEDLSGVTVKRGFLEDSNANSMYEMGQMI 214
               QG      +                     +SG ++    LE SN +    M ++I
Sbjct: 554 FQNDQGLESLGGNLFRETANSNKAILYTDQNGNYISGSSIISNTLEASNVDFSQAMTELI 613

Query: 215 HLTQKFNSITTLIDENEKSMLEAI 238
              + ++S    +  +++ +  AI
Sbjct: 614 VTQKAYSSAAKTVTTSDQMIQRAI 637


>gi|303248690|ref|ZP_07334944.1| fagellar hook-basal body protein [Desulfovibrio fructosovorans JJ]
 gi|302489946|gb|EFL49872.1| fagellar hook-basal body protein [Desulfovibrio fructosovorans JJ]
          Length = 549

 Score = 81.1 bits (198), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/141 (21%), Positives = 59/141 (41%), Gaps = 17/141 (12%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---DIDQKISF 58
            T+   G++  +A   +++++ +N++N +T GF++ +  F  ++ A       +DQ    
Sbjct: 6   NTAMWSGVSGLMANSTKMTSIGNNLANVNTYGFKSARTDFVTLMSATIGTASGVDQVGRG 65

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--------------PRGIILTRDG 104
           V  G        G    TGT  D A+ G+ +F ++                + +  TR G
Sbjct: 66  VRVGSVVTDYSQGGLEITGTNTDMAINGNGFFMVKQKSSVGSNGKMLNTGNQTMYYTRAG 125

Query: 105 RFKVTDDGSLVSASGKYPVLD 125
            F   ++G L S +G      
Sbjct: 126 DFHFDENGYLSSTTGLAVQGW 146



 Score = 74.9 bits (182), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 26/214 (12%), Positives = 54/214 (25%), Gaps = 3/214 (1%)

Query: 26  MSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALE 85
           ++N  + G+      F  V          + +  +       +    + +  T  D    
Sbjct: 336 VANISSSGYPEFTANFKSV---SNGSFTDQGNATSISLNLGMRCTTGWATGTTLGDIDPT 392

Query: 86  GDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEK 145
                   +P  + +  +         S V  S       + +                 
Sbjct: 393 DMTTLGSFNPAQLKINSNVTTNYATSSSTVFTSQNGYTAGLLTSVSVDSDGVLTGTFSNG 452

Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNAN 205
             +      +A         + G      +  S           S  ++    LE SN +
Sbjct: 453 VSLQLWVLALANFTNLQGLNNAGNSLYTATLESGEGTTNRPNSGSVGSISGNTLESSNVD 512

Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              EM  MI   + F   +  I   +  + E I+
Sbjct: 513 MAAEMVSMIVTQRGFEGNSKTITTVDTMLSEIIQ 546


>gi|283850852|ref|ZP_06368138.1| protein of unknown function DUF1078 [Desulfovibrio sp. FW1012B]
 gi|283573775|gb|EFC21749.1| protein of unknown function DUF1078 [Desulfovibrio sp. FW1012B]
          Length = 551

 Score = 81.1 bits (198), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/139 (23%), Positives = 55/139 (39%), Gaps = 17/139 (12%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---DIDQKISFVA 60
           S   G++  LA   ++ST+ +N++N +TVGF+  +  F +++ A         Q    V 
Sbjct: 8   SMWSGVSGLLANSTKMSTIGNNLANVNTVGFKGARTDFMDLMSANIGTAAGDKQIGRGVR 67

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALES--------------PRGIILTRDGRF 106
            G        G   +T   LD A+ G+ +F ++                +    +R G F
Sbjct: 68  VGTVVSDYSQGGLETTSNSLDMAINGNGFFMVKQKSQVGSNGKMLNTGNQTNYYSRAGNF 127

Query: 107 KVTDDGSLVSASGKYPVLD 125
               DG LV+  G      
Sbjct: 128 SFDSDGYLVTPQGLAVQGW 146



 Score = 69.9 bits (169), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 35/94 (37%), Gaps = 5/94 (5%)

Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNAN 205
           + + +  + L +    QG  R  ++  +  +             S  ++    LE SN +
Sbjct: 455 QTQKLWALALANFTNLQGLSREGSNLYAATLESGQGTTNRANTGSVGSISGNTLESSNVD 514

Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              EM  MI   + F + +  I   +  + E I+
Sbjct: 515 MATEMVSMILTQRGFEANSKTITTVDSMLSEVIQ 548


>gi|124268254|ref|YP_001022258.1| flagellar basal body and hook protein [Methylibium petroleiphilum
           PM1]
 gi|124261029|gb|ABM96023.1| flagellar basal body and hook protein [Methylibium petroleiphilum
           PM1]
          Length = 420

 Score = 81.1 bits (198), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 55/135 (40%), Gaps = 3/135 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--ISFVAS 61
           SF  GL+   A  + L  + +N++N  T G ++ + +F +V     N          V  
Sbjct: 2   SFQQGLSGLNAASKNLEIIGNNVANASTFGAKSSRAEFGDVYANALNGSGTNMVGIGVNL 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESP-RGIILTRDGRFKVTDDGSLVSASGK 120
                    G+  +T   +D A+ G  +F +       +  R+G+FK+  +G +V+ SG 
Sbjct: 62  ATVAQQFTQGNITTTDNPMDLAINGSGFFQVSDGKNPTMYARNGQFKIDREGFIVNNSGY 121

Query: 121 YPVLDMASVPIQIPQ 135
             +   A     I  
Sbjct: 122 KLLGYPADGQGVIVP 136



 Score = 78.4 bits (191), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 21/133 (15%), Positives = 40/133 (30%), Gaps = 9/133 (6%)

Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171
           G  V+   +          I I     I      G+     K    + L +    QG   
Sbjct: 290 GFGVTDMSQTGYAPGQLSGISIEANGVIMARYSNGQ----SKPGGQLELANFRNPQGLQP 345

Query: 172 RENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
             N+  +              D +   ++ G LE+SN +   E+  MI   + + +    
Sbjct: 346 LGNNVWATTFTSGDPVVGAAGDGNFGVLQSGALEESNIDLTGELVNMITAQRVYQANAQT 405

Query: 227 IDENEKSMLEAIR 239
           +   +  M   + 
Sbjct: 406 VKTQDSMMQTLVN 418


>gi|253827676|ref|ZP_04870561.1| flagellar hook protein [Helicobacter canadensis MIT 98-5491]
 gi|253511082|gb|EES89741.1| flagellar hook protein [Helicobacter canadensis MIT 98-5491]
          Length = 765

 Score = 81.1 bits (198), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 55/150 (36%), Gaps = 22/150 (14%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56
           M  S   G++     +  +   ++N++N +T GFR    +F  +     N ++       
Sbjct: 1   MVGSLYSGISGIKTHQTGIDVTSNNIANVNTTGFRANSPEFKSLFSTHLNYVNSNSPVAN 60

Query: 57  ---SFVASGKEYLSKEVGSFISTGTELDFALEGDAWF---------------ALESPRGI 98
                V  G   ++   G++++   + + A  G  WF                    +  
Sbjct: 61  DYNYGVTIGSNAINTNDGTYVNADGDFNVAYSGKGWFVVGLNKNGAFDITNPDYTGAQQN 120

Query: 99  ILTRDGRFKVTDDGSLVSASGKYPVLDMAS 128
             TRDG F +  +G LV++SG Y       
Sbjct: 121 YFTRDGSFSLDGEGYLVNSSGYYMYGINLG 150



 Score = 63.7 bits (153), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 32/105 (30%), Gaps = 18/105 (17%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL------------------SGVTV 194
           + I  +G+ +    QG  +   +    N      E                        V
Sbjct: 657 EPIGRIGIAAFVNDQGLSKVGGNLFKMNAMTINGETSVVSGPPLLAWEETGNASLKYGQV 716

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
               LE SN ++   +  +I   + +      I   ++ M EAI+
Sbjct: 717 LDHMLETSNVDTGTALTDLIVYQRGYQMSAKSITTADQLMQEAIQ 761


>gi|240137459|ref|YP_002961930.1| putative Flagellar hook protein flgE [Methylobacterium extorquens
           AM1]
 gi|240007427|gb|ACS38653.1| putative Flagellar hook protein flgE [Methylobacterium extorquens
           AM1]
          Length = 460

 Score = 81.1 bits (198), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 41/216 (18%), Positives = 81/216 (37%), Gaps = 23/216 (10%)

Query: 1   MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
           M   ++    ++   A    LS ++ N++N+ T G++ I   F +++    +   Q    
Sbjct: 1   MDVFSALQTAVSGLKAQSFSLSNISGNIANSQTTGYKRIDTSFVDML-VDGDAKSQTAGS 59

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-----------LTRDGRFK 107
           V +  E  +   G+ +STG   + A++G  +FA+                   TR G F 
Sbjct: 60  VGAFSELTNSIQGNKVSTGVSTNMAIDGQGFFAVRKKTTDAGGGEGFTAGNLYTRRGDFA 119

Query: 108 VTDDGSLVSASGKY-------PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
              DG LV+ +G Y       PV    +    I   + +        I+    +  +   
Sbjct: 120 PDKDGYLVNTAGAYLVGASLDPVTGQTNGTGPIKISNAVIPAKPTTTITYSANLPKSPAT 179

Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKR 196
            +   +QG +   + G   +   TP    +  +V +
Sbjct: 180 TNAASTQGLLSAFSDG--TDARVTPANGATTGSVSQ 213



 Score = 64.5 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 19/137 (13%), Positives = 43/137 (31%), Gaps = 3/137 (2%)

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           +       V+ +        +     +   +     G+    S  G  +A + +      
Sbjct: 326 QYAAASGTVTTNDLKQNGYASGTLNSVEVGENGIISGKYSNGSVIG--LARVEVAQFVNP 383

Query: 167 QGFVRRE-NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225
            G       +         P+  L   TV    +E SN +   E  +MI   Q +++ T 
Sbjct: 384 DGLKPDSLGNYQQTVASGEPIVGLKDSTVVGANVEQSNTDIAAEFSKMIVTQQAYSANTR 443

Query: 226 LIDENEKSMLEAIRNIA 242
           ++   +  + + +  I 
Sbjct: 444 VMSTAQTMISDLLNVIR 460


>gi|218528943|ref|YP_002419759.1| hypothetical protein Mchl_0913 [Methylobacterium chloromethanicum
           CM4]
 gi|218521246|gb|ACK81831.1| protein of unknown function DUF1078 domain protein
           [Methylobacterium chloromethanicum CM4]
          Length = 460

 Score = 81.1 bits (198), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 41/216 (18%), Positives = 81/216 (37%), Gaps = 23/216 (10%)

Query: 1   MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
           M   ++    ++   A    LS ++ N++N+ T G++ I   F +++    +   Q    
Sbjct: 1   MDVFSALQTAVSGLKAQSFSLSNISGNIANSQTTGYKRIDTSFVDML-VDGDAKSQTAGS 59

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-----------LTRDGRFK 107
           V +  E  +   G+ +STG   + A++G  +FA+                   TR G F 
Sbjct: 60  VGAFSELTNSIQGNKVSTGVSTNMAIDGQGFFAVRKKTTDAGGGEGFTAGNLYTRRGDFA 119

Query: 108 VTDDGSLVSASGKY-------PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
              DG LV+ +G Y       PV    +    I   + +        I+    +  +   
Sbjct: 120 PDKDGYLVNTAGAYLVGASLDPVTGQTNGTGPIKISNAVIPAKPTTTITYSANLPKSPAT 179

Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKR 196
            +   +QG +   + G   +   TP    +  +V +
Sbjct: 180 TNAASTQGLLSAFSDG--TDARVTPANGATTGSVSQ 213



 Score = 64.5 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 19/137 (13%), Positives = 43/137 (31%), Gaps = 3/137 (2%)

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           +       V+ +        +     +   +     G+    S  G  +A + +      
Sbjct: 326 QYAAASGTVTTNDLKQNGYASGTLNSVEVGENGIISGKYSNGSVIG--LARVEVAQFVNP 383

Query: 167 QGFVRRE-NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225
            G       +         P+  L   TV    +E SN +   E  +MI   Q +++ T 
Sbjct: 384 DGLKPDSLGNYQQTVASGEPIVGLKDSTVVGANVEQSNTDIAAEFSKMIVTQQAYSANTR 443

Query: 226 LIDENEKSMLEAIRNIA 242
           ++   +  + + +  I 
Sbjct: 444 VMSTAQTMISDLLNVIR 460


>gi|167590742|ref|ZP_02383130.1| flagellar hook protein FlgE [Burkholderia ubonensis Bu]
          Length = 262

 Score = 81.1 bits (198), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 60/185 (32%), Gaps = 2/185 (1%)

Query: 12  QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVASGKEYLSKE 69
                  L  + +N++N +TVGF+  +  FS++           Q               
Sbjct: 1   MAGASNNLDVIGNNIANANTVGFKQSRAHFSDMYANSVATSVNTQIGIGTGLASIDQQFG 60

Query: 70  VGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASV 129
            G+  +TG  LD A+ G+ +F + +   +  +RDG F    +G +V + G+  +   A+ 
Sbjct: 61  QGTINTTGNALDVAINGNGFFQMSNNGVVTYSRDGTFHRDKNGFIVDSHGRNLMGYNATA 120

Query: 130 PIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL 189
              I     +        ++       T         +  V    S              
Sbjct: 121 GGVINTAATVPMQAPTTNLAPTATTRITGQFNLNSQDKVPVTTPFSATDNTTYNYMTSIQ 180

Query: 190 SGVTV 194
              ++
Sbjct: 181 VYDSL 185


>gi|313610153|gb|EFR85462.1| flagellar basal body rod protein FlgG [Listeria monocytogenes FSL
           F2-208]
          Length = 238

 Score = 81.1 bits (198), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 80/230 (34%), Gaps = 16/230 (6%)

Query: 23  ADNMSNTDTVGFRTIKVKFSEV--------VGAIKNDIDQKISFVASGKEYLSKEVGSFI 74
           ++N++N  T GF+  ++    +         G +   +      V     +++   GS  
Sbjct: 1   SNNVANAQTPGFKFDQLTSEVISRNKVNYQNGPVTRQVGTIDYGVRPAATHINLTAGSSY 60

Query: 75  STGTELDFALE------GDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMAS 128
            T  + DF ++      G  +F       I L+R G+F     G L +A G   +     
Sbjct: 61  ITNRDRDFFMQDTDPTQGSNFFITAKNGEISLSRGGQFHSDQFGFLRTADGANLLSATGE 120

Query: 129 VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG--FVRRENSGISPNIPPTPL 186
                 +             ++  + +  +G   V  +Q    V+     +  N   T  
Sbjct: 121 AIQVGQKTSIRAEANGDLYNAETSQYLGRLGTKFVSANQADSLVKDGEGRLHVNGINTMN 180

Query: 187 EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                  ++ G +E SN +   EM Q++   +   +   +++  +K   +
Sbjct: 181 LPAGQGIIQNGVIETSNVDLGVEMVQLMDNQRMVQASKNVVNMFDKVYDK 230


>gi|254559637|ref|YP_003066732.1| flagellar hook protein flgE [Methylobacterium extorquens DM4]
 gi|254266915|emb|CAX22714.1| putative Flagellar hook protein flgE [Methylobacterium extorquens
           DM4]
          Length = 460

 Score = 81.1 bits (198), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 41/216 (18%), Positives = 81/216 (37%), Gaps = 23/216 (10%)

Query: 1   MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
           M   ++    ++   A    LS ++ N++N+ T G++ I   F +++    +   Q    
Sbjct: 1   MDVFSALQTAVSGLKAQSFSLSNISGNIANSQTTGYKRIDTSFVDML-VDGDAKSQTAGS 59

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-----------LTRDGRFK 107
           V +  E  +   G+ +STG   + A++G  +FA+                   TR G F 
Sbjct: 60  VGAFSELTNSIQGNKVSTGVSTNMAIDGQGFFAVRKKTTDAGGGEGFTAGNLYTRRGDFA 119

Query: 108 VTDDGSLVSASGKY-------PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
              DG LV+ +G Y       PV    +    I   + +        I+    +  +   
Sbjct: 120 PDKDGYLVNTAGAYLVGASLDPVTGQTNGTGPIKISNAVIPAKPTTTITYSANLPKSPAT 179

Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKR 196
            +   +QG +   + G   +   TP    +  +V +
Sbjct: 180 TNAASTQGLLSAFSDG--TDARVTPANGATTGSVSQ 213



 Score = 64.5 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 19/137 (13%), Positives = 43/137 (31%), Gaps = 3/137 (2%)

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           +       V+ +        +     +   +     G+    S  G  +A + +      
Sbjct: 326 QYAAASGTVTTNDLKQNGYASGTLNSVEVGENGIISGKYSNGSVIG--LARVDVAQFVNP 383

Query: 167 QGFVRRE-NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225
            G       +         P+  L   TV    +E SN +   E  +MI   Q +++ T 
Sbjct: 384 DGLKPDSLGNYQQTVASGEPIVGLKDSTVVGANVEQSNTDIAAEFSKMIVTQQAYSANTR 443

Query: 226 LIDENEKSMLEAIRNIA 242
           ++   +  + + +  I 
Sbjct: 444 VMSTAQTMISDLLNVIR 460


>gi|163850383|ref|YP_001638426.1| hypothetical protein Mext_0950 [Methylobacterium extorquens PA1]
 gi|163661988|gb|ABY29355.1| protein of unknown function DUF1078 domain protein
           [Methylobacterium extorquens PA1]
          Length = 460

 Score = 81.1 bits (198), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 41/216 (18%), Positives = 81/216 (37%), Gaps = 23/216 (10%)

Query: 1   MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
           M   ++    ++   A    LS ++ N++N+ T G++ I   F +++    +   Q    
Sbjct: 1   MDVFSALQTAVSGLKAQSFSLSNISGNIANSQTTGYKRIDTSFVDML-VDGDAKSQTAGS 59

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-----------LTRDGRFK 107
           V +  E  +   G+ +STG   + A++G  +FA+                   TR G F 
Sbjct: 60  VGAFSELTNSIQGNKVSTGVSTNMAIDGQGFFAVRKKTTDAGGGEGFTAGNLYTRRGDFA 119

Query: 108 VTDDGSLVSASGKY-------PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
              DG LV+ +G Y       PV    +    I   + +        I+    +  +   
Sbjct: 120 PDKDGYLVNTAGAYLVGASLDPVTGQTNGTGPIKISNAVIPAKPTTTITYSANLPKSPAT 179

Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKR 196
            +   +QG +   + G   +   TP    +  +V +
Sbjct: 180 TNAASTQGLLSAFSDG--TDARVTPANGATTGSVSQ 213



 Score = 64.5 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 19/137 (13%), Positives = 43/137 (31%), Gaps = 3/137 (2%)

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           +       V+ +        +     +   +     G+    S  G  +A + +      
Sbjct: 326 QYAAASGTVTTNDLKQNGYASGTLNSVEVGENGIISGKYSNGSVIG--LARVEVAQFVNP 383

Query: 167 QGFVRRE-NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225
            G       +         P+  L   TV    +E SN +   E  +MI   Q +++ T 
Sbjct: 384 DGLKPDSLGNYQQTVASGEPIVGLKDSTVVGANVEQSNTDIAAEFSKMIVTQQAYSANTR 443

Query: 226 LIDENEKSMLEAIRNIA 242
           ++   +  + + +  I 
Sbjct: 444 VMSTAQTMISDLLNVIR 460


>gi|92114098|ref|YP_574026.1| flagellar basal body FlaE [Chromohalobacter salexigens DSM 3043]
 gi|91797188|gb|ABE59327.1| flagellar basal body FlaE [Chromohalobacter salexigens DSM 3043]
          Length = 387

 Score = 81.1 bits (198), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 59/164 (35%), Gaps = 6/164 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
            F+  L+   A   +L T+ +N++N+ TVGF++  V+F+++    +              
Sbjct: 2   GFSQSLSGVNAASSQLDTIGNNIANSQTVGFKSSSVQFADIFANSQG------LGTRVAG 55

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPV 123
           +      GS  +TG  LD A+ GD +F       +  +R+G+  ++ DG   +A G    
Sbjct: 56  KLQDFGTGSLETTGRGLDLAIAGDGFFQFTQNEQLAYSRNGQLSMSADGYFENAQGARLT 115

Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
                                             +   + +  Q
Sbjct: 116 DQQGEPLQVTQFSQGAQATTGVETAFNLNAETEALAPNNFNQDQ 159



 Score = 76.8 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 15/121 (12%), Positives = 36/121 (29%), Gaps = 5/121 (4%)

Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183
            D  +    +  +            +   + + T+G+ +    +G   + ++  +     
Sbjct: 265 QDGNASGTFVGVEITENGEVLANYSNGNSEAVGTVGMANFRNPEGLEPQGDNLWAATQES 324

Query: 184 TPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
                    T     ++ G LE SN +   E+  MI   + F +    I      +    
Sbjct: 325 GAALLGQAGTGQLGSLESGTLEASNVDLTQELVDMIIAQRNFQANNNAIQTQSDILETVT 384

Query: 239 R 239
            
Sbjct: 385 N 385


>gi|312879594|ref|ZP_07739394.1| fagellar hook-basal body protein [Aminomonas paucivorans DSM 12260]
 gi|310782885|gb|EFQ23283.1| fagellar hook-basal body protein [Aminomonas paucivorans DSM 12260]
          Length = 554

 Score = 81.1 bits (198), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 22/136 (16%), Positives = 45/136 (33%), Gaps = 7/136 (5%)

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
           T  GS  +  G Y       V        +    G     + K + +  + L      QG
Sbjct: 418 TQYGSGFTTKGYYQDGYAMGVLEDYAVSADGTVSGVY--SNGKNQPLYQVALALFANPQG 475

Query: 169 FVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223
            V+  ++  S +      +     +     +    LE +N +   E   +I   + F + 
Sbjct: 476 LVKEGDTVFSESANSGMAQVMTPMEGGAGKIMGSNLEMANVDLSQEFVNLIVAQRGFQAN 535

Query: 224 TTLIDENEKSMLEAIR 239
             +I  +++ + E I 
Sbjct: 536 ARVITTSDQVLEELIN 551


>gi|218528727|ref|YP_002419543.1| flagellar hook protein FlgE [Methylobacterium chloromethanicum CM4]
 gi|218521030|gb|ACK81615.1| flagellar basal body FlaE domain protein [Methylobacterium
           chloromethanicum CM4]
          Length = 403

 Score = 80.7 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 65/181 (35%), Gaps = 1/181 (0%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
              G++   A   R+STVA+N+ N  T G++    +FS ++    +  +     V +   
Sbjct: 7   LRTGVSGMNAQSNRISTVAENIQNASTTGYKRTSAEFSSLLLDSGDVGNYNSGAVETTLR 66

Query: 65  YLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYPV 123
               E G   ST ++ D A++G+ +F +        +TR G F V      +  +G + +
Sbjct: 67  RSVSEGGPIASTNSDKDLAIQGNGFFVVSDAAGAPFMTRAGNFVVDGKTGNLVNAGGFTL 126

Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183
           +  +                +   +S  G+        +V  +  F        +     
Sbjct: 127 MGYSLANGTPNPVLNGVADLKPVNVSVMGQEARPSTAATVSGNLSFETPVYDPTATGAIG 186

Query: 184 T 184
            
Sbjct: 187 Y 187



 Score = 62.6 bits (150), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 19/193 (9%), Positives = 45/193 (23%), Gaps = 7/193 (3%)

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113
           Q     A+       +     ++        +G+      +   + +   G   V   G 
Sbjct: 208 QMTKTAANTWSVEFLDPAPPSTSLGTTSVTFDGNGKITGSASTLVKVPNGGSIPVDLRGL 267

Query: 114 LVSASGKYPVLDMAS--VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171
              +                                     K    + L  V        
Sbjct: 268 TQLSGNHNLSGTADGSSPTSVSGTAFGEDGTVYAVYTDGTRKAAFKVPLADVASPDNLAP 327

Query: 172 RENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
           R  +  + +     ++           +K G LE SN +   E+  MI     + + + +
Sbjct: 328 RAGNVFTTSAESGDIQIGFAGQGGRGILKAGALEQSNVDVSTELTTMIESQTVYTANSKV 387

Query: 227 IDENEKSMLEAIR 239
                + +   + 
Sbjct: 388 FMTGNELLETLMN 400


>gi|34558066|ref|NP_907881.1| flagellar hook protein FlgE [Wolinella succinogenes DSM 1740]
 gi|34483784|emb|CAE10781.1| FLAGELLAR HOOK PROTEIN FLGE [Wolinella succinogenes]
          Length = 745

 Score = 80.7 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 59/150 (39%), Gaps = 22/150 (14%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56
           M  +   GL+  L  +  L +V++N++N +T G+R    +F  +     + I+       
Sbjct: 1   MNATLFNGLSGILTHQVGLDSVSNNIANVNTTGYRANIPQFETLFAKSMSYINSSSPINN 60

Query: 57  ---SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---------------RGI 98
                V      +S + GS+ S+  E D A  G  WF + +                +  
Sbjct: 61  DFEHGVTVSSNAISNKNGSYKSSDGEFDIAYAGKGWFVVGTQKSGSFDLQNPTVAATQKN 120

Query: 99  ILTRDGRFKVTDDGSLVSASGKYPVLDMAS 128
             TRDG F    +G LV+ASG Y       
Sbjct: 121 YFTRDGSFSRDSEGYLVNASGYYLYGIDLG 150



 Score = 58.7 bits (140), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 34/105 (32%), Gaps = 17/105 (16%)

Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPN-----------------IPPTPLEDLSGVT 193
           K +V+  +GL +    QG  +   +                      +       L    
Sbjct: 637 KSEVMGRVGLAAFVNDQGLQKVGGNMFQMTSISVNGGQPVYSSGAPILAWDETGQLKFGK 696

Query: 194 VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           V    LE SN +    + ++I L + ++         ++ + EAI
Sbjct: 697 VLDSMLETSNVDIGAALTELIVLQRGYSFNAKAFTTGDELIKEAI 741


>gi|144900453|emb|CAM77317.1| Flagellar hook protein FlgE [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 693

 Score = 80.7 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/177 (19%), Positives = 64/177 (36%), Gaps = 6/177 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +   G++   +    +  ++DN+SN +TVG++  +V F  +V    +        V S  
Sbjct: 6   ALFSGVSGLASQSSAMGAISDNISNVNTVGYKGARVNFQTLVTKQTSITAYSPGGVQSKP 65

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALE------SPRGIILTRDGRFKVTDDGSLVSA 117
                  G   +T +  D  + G  +F +       +      TR G FKV  +G L + 
Sbjct: 66  RQGVDVQGLLQATNSSTDIGMSGQGFFIVNEAARPENGDMFAYTRAGSFKVDSEGYLQNV 125

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174
           SG Y             Q  ++         + K     T+ +    +S   +R  N
Sbjct: 126 SGWYMQGWPLMSWDNSQQASQVTVGNNVFMKAYKDDTGNTVYINDNVVSADHLRPLN 182



 Score = 65.3 bits (157), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 12/93 (12%), Positives = 30/93 (32%), Gaps = 5/93 (5%)

Query: 152 GKVIATMGLYSVDMSQGFVRRENS-GISPNIPPTPLEDL----SGVTVKRGFLEDSNANS 206
            + +  + + +     G      +  I  +    P            +    LE S  + 
Sbjct: 598 TRAVFQIPVATFVNPNGMQSLSGNVFIGTDFSGEPTLRGAGSAGAGQINASSLEASTVDI 657

Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             E   MI   + +++   +I   ++ + E +R
Sbjct: 658 GEEFTTMIVTQRAYSAAAKIITTADEMLDELVR 690


>gi|212709492|ref|ZP_03317620.1| hypothetical protein PROVALCAL_00534 [Providencia alcalifaciens DSM
           30120]
 gi|212687830|gb|EEB47358.1| hypothetical protein PROVALCAL_00534 [Providencia alcalifaciens DSM
           30120]
          Length = 422

 Score = 80.7 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 17/98 (17%), Positives = 38/98 (38%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISP-NIPPTPLE----DLSGVTVKRGFLED 201
             +Q+ +V+  + L +     G V +  +  +  N    P++          +  G LE 
Sbjct: 323 YSNQQKRVVGQIALSAFANPNGLVSQGGNVWAASNASGNPMDGVPGVGQFGKLTSGALES 382

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E+  MI + + + S    I   ++ +   + 
Sbjct: 383 SNVDMSQELISMIVMQRNYQSNAQTIKTQDQMLQTLVN 420



 Score = 77.6 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 53/129 (41%), Gaps = 6/129 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SF+  ++   A    L ++ +N++N+ T GF+     F+++       +      V    
Sbjct: 2   SFSQAVSGLNAASAGLDSIGNNIANSATNGFKGATTSFADMFAGSGVGL-----GVNVAA 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
              + + G    T    D A+ G+ +F   +    +  +RDG+F     G+LV+  G   
Sbjct: 57  VTQNFKDGPITRTDRATDVAISGNGFFRVQDQNGDVYYSRDGQFLRDKSGNLVNNQGMVV 116

Query: 123 VLDMASVPI 131
               ASV  
Sbjct: 117 TGYPASVDD 125


>gi|90422624|ref|YP_530994.1| flagellar hook protein FlgE [Rhodopseudomonas palustris BisB18]
 gi|90104638|gb|ABD86675.1| flagellar basal body FlaE [Rhodopseudomonas palustris BisB18]
          Length = 411

 Score = 80.7 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 2/123 (1%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
              G +   A   +LS VADN++N +T G++    +FS ++    +        V +   
Sbjct: 7   MRTGGSGMTAQSNKLSAVADNIANVNTTGYKRASTEFSSLILKSGS-GSYNSGSVETQVR 65

Query: 65  YLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGKYPV 123
           Y   + G+   T +  D A++G+ +FA+ +  G   LTR G F     G+L +A+G Y +
Sbjct: 66  YAISDPGTLQYTTSATDLAIQGNGFFAVSNAGGTPFLTRAGSFVPDGQGNLYNAAGYYLM 125

Query: 124 LDM 126
              
Sbjct: 126 GYN 128



 Score = 64.5 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 51/183 (27%), Gaps = 9/183 (4%)

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALESPRGIILT--RDGRFKVTDDGSLVSASGKYPV 123
                    +     D +  G    A  SP  + LT      F +        A+     
Sbjct: 226 FPYTGAPLATGNFSFDVSATGKGRLAGGSPTSLSLTIPNGSPFTLDLSSMTQVAADFQFK 285

Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLY--SVDMSQGFVRRENSGISPNI 181
             +         K E+   G    I   G  IAT  +   +V      V    +  S  I
Sbjct: 286 ATVDGNSPSSIDKVEVATDGTMYAIYNDGTRIATYKIPLATVPSPDNLVPEVGNVYSIGI 345

Query: 182 PPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
               ++           VK   LE SN +   E+  MI   + + + + +       +  
Sbjct: 346 NSGNVQVDFAGHSGLGIVKAEALEASNVDLANELTAMIESQRGYTANSKVFQTGADLLDV 405

Query: 237 AIR 239
            + 
Sbjct: 406 LVN 408


>gi|186477697|ref|YP_001859167.1| flagellar basal body FlaE domain-containing protein [Burkholderia
           phymatum STM815]
 gi|184194156|gb|ACC72121.1| flagellar basal body FlaE domain protein [Burkholderia phymatum
           STM815]
          Length = 501

 Score = 80.7 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 67/192 (34%), Gaps = 2/192 (1%)

Query: 8   GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVASGKEY 65
           GL+        L  + +N++N +TVGF+    +F+++          +Q        +  
Sbjct: 6   GLSGLAGASSDLDVIGNNIANANTVGFKQGAAQFADMYANSVATAVNNQIGIGTRMSQVE 65

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125
            +   G+  +    L  A+ G  +F + +   +  +R+G F++  +G + +A G   +  
Sbjct: 66  QNFSQGTISTDDIALHVAINGSGFFQMSNNGALTYSRNGVFQLDKNGYITNADGLKLMGY 125

Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185
            A+    I     +        I        T GL         +   +   + +     
Sbjct: 126 AANANGIINTAGTVPLQVPTANIPPTATKTITAGLNLNAQDALKLGTPSVTFTTSTGSLT 185

Query: 186 LEDLSGVTVKRG 197
              +S     +G
Sbjct: 186 NNGVSITDATQG 197



 Score = 66.0 bits (159), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 12/125 (9%), Positives = 33/125 (26%), Gaps = 5/125 (4%)

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                D  +             +      + +   +  + L +     G +   N+    
Sbjct: 376 NSLTQDGFAAGQLTNFTVGTDGIITGNYSNGQTAALGQVALATFANQNGLINLGNNQFQA 435

Query: 180 NIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
                          +  +++ G  E+SN +   E+  +I   + + +    I   +   
Sbjct: 436 TAASGVAVVAAPGSTNHGSLQGGATENSNVDLTSELVNLITAQRNYQANAQTIKTQQTVD 495

Query: 235 LEAIR 239
              I 
Sbjct: 496 QTLIN 500


>gi|225871934|ref|YP_002753388.1| flagellar hook protein flgE [Acidobacterium capsulatum ATCC 51196]
 gi|225793054|gb|ACO33144.1| flagellar hook protein flgE [Acidobacterium capsulatum ATCC 51196]
          Length = 409

 Score = 80.7 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 62/157 (39%), Gaps = 6/157 (3%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ-----KI 56
            +SF+I L    A    L T+A+N+SN +T  F++ +  F ++      +          
Sbjct: 1   MSSFSIPLTGLEASSTSLDTIANNLSNMNTTAFKSQQASFGDLFYQQIGNSGSGDPLEVG 60

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLV 115
           + V       +   G+   TG   D AL G  +F + +  G    TRDG F +T  G L 
Sbjct: 61  AGVQVAATNTNFTQGTVSETGNATDVALNGSGFFVVRNSDGTPAYTRDGNFTLTSSGDLT 120

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG 152
           +  G+  +   A+  +              G++ Q  
Sbjct: 121 TQGGQAVMGYPAANGVVNTNSALSPIQIPVGQVEQPQ 157



 Score = 61.4 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 14/96 (14%), Positives = 31/96 (32%), Gaps = 5/96 (5%)

Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNAN 205
           + + +  + L S+   QG      +     +                TV+   LE SN N
Sbjct: 313 QTQAVGQLALASITNEQGLQLDGGNLYQTTLASGSASIGLAGSAGLGTVQDSALEGSNVN 372

Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
              E   ++     + + +  +   ++   + I  I
Sbjct: 373 ISTEFSNLVVAQNAYEASSKALTTFDQVAQDTINII 408


>gi|195953027|ref|YP_002121317.1| protein of unknown function DUF1078 domain protein
           [Hydrogenobaculum sp. Y04AAS1]
 gi|195932639|gb|ACG57339.1| protein of unknown function DUF1078 domain protein
           [Hydrogenobaculum sp. Y04AAS1]
          Length = 583

 Score = 80.3 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 83/213 (38%), Gaps = 13/213 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ------ 54
           M  SF   ++   A    LS +++NMSN DT+G++ +   F  VV  +   I+       
Sbjct: 1   MLPSFYNAISGLDAFNNYLSIISNNMSNADTIGYKAVNPIFENVVANVNVGINTLTDTLK 60

Query: 55  ---KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR---GIILTRDGRFKV 108
                + V      L+ ++G+F  TG   D A++G+  F L+ P     +  TR+G+F +
Sbjct: 61  STIYGAGVIVDSTQLNWQLGNFEQTGNNTDLAIQGNGLFILQDPANAGNVFYTRNGQFTI 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
           +  G +V+  G   +         +             +  +   +I      +++ +  
Sbjct: 121 SQQGYMVNPDGLKLLGYKVDQSGSVVGTSLQPIYIIPQQPPKATDLITYQQPTNLNSTAP 180

Query: 169 FVRRENSGISPNIPPTPLEDLSGVTVKRGFLED 201
            + +  + ++           +  T+    +E 
Sbjct: 181 SITQAFNPLNTATFNYQNTLTTFDTL-GNAIEG 212



 Score = 68.4 bits (165), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 16/137 (11%), Positives = 44/137 (32%), Gaps = 4/137 (2%)

Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162
           +           ++AS     L        +     +  V   G+ +     +  + L  
Sbjct: 447 NSYITQDASDFTITASQDGYSLGNLVNVYVLSSDGTVVGVYSNGQST----PLYRVALAQ 502

Query: 163 VDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222
                  + + ++  +    PT L   S   ++ G LE SN +      Q++   + + +
Sbjct: 503 FQDPNELIEKGSNLYTSIYTPTILLPGSADIIQSGMLEQSNVDIAQAYIQLVTAERSYQA 562

Query: 223 ITTLIDENEKSMLEAIR 239
              ++  ++  +   + 
Sbjct: 563 NAKVVTSSDNVLQATLN 579


>gi|303249022|ref|ZP_07335267.1| fagellar hook-basal body protein [Desulfovibrio fructosovorans JJ]
 gi|302489608|gb|EFL49548.1| fagellar hook-basal body protein [Desulfovibrio fructosovorans JJ]
          Length = 519

 Score = 80.3 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 58/134 (43%), Gaps = 6/134 (4%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---DIDQKISF 58
            ++   G++  L+    ++   +N++NT T G+++ ++ F++++  +     D  Q  + 
Sbjct: 1   MSAIWTGVSGLLSYSTGIANTGNNLANTGTTGYKSSRLLFADMISEMAGGTSDGSQIGTG 60

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFAL---ESPRGIILTRDGRFKVTDDGSLV 115
           V  G   ++   GS IS    +D A+ G+  + +           TRDG F    +G L 
Sbjct: 61  VQVGSVSMTTSTGSPISASQSMDMAINGERGYFVVKKPGTDKTYYTRDGAFNFDVNGYLT 120

Query: 116 SASGKYPVLDMASV 129
           + +G          
Sbjct: 121 TETGLNVQGWAVDQ 134



 Score = 74.9 bits (182), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 40/120 (33%), Gaps = 5/120 (4%)

Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183
            D  +    +    +   V      + +   +  +GL          R  N+ +S     
Sbjct: 396 QDGYASGTLLSTSVDENGVISGTFSNGQTIELFVVGLADFVNPTDLYREGNNLLSATKES 455

Query: 184 TPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
                         +V    LE SN +   EM  +I L + F S + ++   ++ M +A+
Sbjct: 456 GDASLGRANSGVFDSVSGYTLESSNVDMATEMVNLITLQRAFQSNSKVVTTADEMMQKAL 515


>gi|240137257|ref|YP_002961726.1| flagellar hook protein FlgE [Methylobacterium extorquens AM1]
 gi|240007223|gb|ACS38449.1| flagellar hook protein FlgE [Methylobacterium extorquens AM1]
          Length = 403

 Score = 80.3 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 65/181 (35%), Gaps = 1/181 (0%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
              G++   A   R+STVA+N+ N  T G++    +FS ++    +  +     V +   
Sbjct: 7   LRTGVSGMNAQSNRISTVAENIQNASTTGYKRTSAEFSSLLLDSGDVGNYNSGAVETTLR 66

Query: 65  YLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYPV 123
               E G   ST ++ D A++G+ +F +        +TR G F V      +  +G + +
Sbjct: 67  RSVSEGGPIASTNSDKDLAIQGNGFFVVSDAAGAPFMTRAGNFVVDGKTGNLVNAGGFTL 126

Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183
           +  +                +   +S  G+        +V  +  F        +     
Sbjct: 127 MGYSLANGTPNPVLNGVADLKPVNVSVMGQEARPSTAATVSGNLSFETPVYDPTATGAIG 186

Query: 184 T 184
            
Sbjct: 187 Y 187



 Score = 62.6 bits (150), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 18/193 (9%), Positives = 43/193 (22%), Gaps = 7/193 (3%)

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113
           Q     A+       +  +  +         +G+          + +       V   G 
Sbjct: 208 QMTKTAANTWSVEFFDPAAPTTPVGTTSVTFDGNGKVNGGGSALVAVPNGRSITVDLGGL 267

Query: 114 LVSASGKYPVLDMAS--VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171
              +                                     K    + L  V        
Sbjct: 268 TQLSGDHNLSGTANGSSPTSVSGTAFGEDGTVYAVYTDGTRKAAFKVPLADVASPDNLAP 327

Query: 172 RENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
           R  +  + +     ++           +K G LE SN +   E+  MI     + + + +
Sbjct: 328 RAGNVFTTSAESGDIQVGFAGQGGRGILKAGALEQSNVDVSTELTTMIESQTVYTANSKV 387

Query: 227 IDENEKSMLEAIR 239
                + +   + 
Sbjct: 388 FMTGNELLETLMN 400


>gi|83591885|ref|YP_425637.1| hypothetical protein Rru_A0546 [Rhodospirillum rubrum ATCC 11170]
 gi|83574799|gb|ABC21350.1| conserved hypothetical protein [Rhodospirillum rubrum ATCC 11170]
          Length = 661

 Score = 80.3 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/168 (22%), Positives = 62/168 (36%), Gaps = 7/168 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +   G++   A    L  +ADN++N +TVG++  KV F  +V    +        V S  
Sbjct: 6   ALFSGVSGLQAQSSALGAIADNVTNVNTVGYKGTKVNFQTLVTQQVSLTAYSPGGVQSKP 65

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWF----ALESPRGIILTRDGRFKVTDDGSLVSASG 119
                  G   +T +  D  + G  +F        P G   +R G FKV  DG L+++ G
Sbjct: 66  RTGVDVQGLLQATTSSTDIGISGQGFFVVSGQAIDPTGYAYSRAGSFKVDKDGYLMNSGG 125

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
            Y                    V + G +  K     +   Y ++ + 
Sbjct: 126 YYMQGW---PLDNWDGTAAASTVTKNGNVYMKSYKTGSGDTYYINPNA 170



 Score = 69.9 bits (169), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 15/93 (16%), Positives = 29/93 (31%), Gaps = 5/93 (5%)

Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLEDSNANS 206
              I  + + +     G      +                 + S  TV +  LE S  + 
Sbjct: 566 TTPIFMIPIATFVNPNGMNSLSGNVFQETDNSGLPTVRAAGEASAGTVNQATLEASTVDL 625

Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             E   MI   + +++   +I   +  + E IR
Sbjct: 626 GSEFTNMITTQRAYSAAAKIITTADDMLDELIR 658


>gi|328542111|ref|YP_004302220.1| flagellar hook-basal body protein [polymorphum gilvum SL003B-26A1]
 gi|326411861|gb|ADZ68924.1| Flagellar hook-basal body protein [Polymorphum gilvum SL003B-26A1]
          Length = 545

 Score = 80.3 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/139 (23%), Positives = 54/139 (38%), Gaps = 6/139 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           + + G++  +A    LST+++N+SN +T G++  +  FS +V             VAS  
Sbjct: 6   ALSTGVSGVIAQGSSLSTISNNISNLNTPGYKGSRTLFSHMVTGGGRPGTPVSGSVASLD 65

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWF------ALESPRGIILTRDGRFKVTDDGSLVSA 117
           +      G+ I+T    D AL G  +F       +         R   F     G LVS+
Sbjct: 66  QRDLTAQGAIINTSRPADLALVGKGFFVVTDSPFVGPETSYFYQRTSSFSENTQGYLVSS 125

Query: 118 SGKYPVLDMASVPIQIPQK 136
            G +          +I   
Sbjct: 126 QGLHLQGWRTDASGEIINP 144



 Score = 67.2 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 11/82 (13%), Positives = 24/82 (29%), Gaps = 5/82 (6%)

Query: 163 VDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217
                G        +                    T+    +E SN +   E   MI   
Sbjct: 462 FQDPNGLELVSGGLLREAEQSGRPFFREAGTSGTATIAPSSIEQSNVDIGTEFSNMIVSQ 521

Query: 218 QKFNSITTLIDENEKSMLEAIR 239
           + +++ T +I   ++ + E + 
Sbjct: 522 RSYSASTKVITTVDQMLNELMN 543


>gi|292487939|ref|YP_003530814.1| flagellar hook protein FlgE [Erwinia amylovora CFBP1430]
 gi|292899158|ref|YP_003538527.1| flagellar hook protein FlgE [Erwinia amylovora ATCC 49946]
 gi|291199006|emb|CBJ46117.1| flagellar hook protein FlgE [Erwinia amylovora ATCC 49946]
 gi|291553361|emb|CBA20406.1| Flagellar hook protein flgE [Erwinia amylovora CFBP1430]
 gi|312172060|emb|CBX80317.1| Flagellar hook protein flgE [Erwinia amylovora ATCC BAA-2158]
          Length = 402

 Score = 80.3 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/237 (11%), Positives = 67/237 (28%), Gaps = 24/237 (10%)

Query: 25  NMSNTD---TVGF--RTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTE 79
           N +N +   T  +  ++    F  +     + ++      A     +     S  + G +
Sbjct: 166 NYANLNINDTTTYNAKSSMTTFDSL--GNAHTVNLYFVKTADNNWTVHPVDASTGTAGAD 223

Query: 80  LDFALEGDAWFALESPRGIILTRD--------GRFKVTDDGSLVSASG----KYPVLDMA 127
            +     +      +   +  T              V   GS    +G      P  D  
Sbjct: 224 TNLVFNANGQLVTPNNGQVSFTMGQLNGSNGPTTLNVNLTGSQQQNNGKSTFGNPTQDGY 283

Query: 128 SVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPL- 186
                   +            +++ +++  + L +    +G     ++  S         
Sbjct: 284 KPGELTSYQINDDGTLVGTYSNEQTQLLGQIVLSNFANPEGLKSEGDNVWSSTAASGQAL 343

Query: 187 ----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
                  +  T+  G LE SN +   E+  MI   + + S    I   ++ +   + 
Sbjct: 344 SGIAGTGNLGTLTAGALESSNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400



 Score = 70.3 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 71/182 (39%), Gaps = 6/182 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
            F+  ++   A    L  + +N+SN+ T GF++  V F+++    K  +  K++ V    
Sbjct: 2   GFSQAVSGLNAASSNLDVIGNNISNSATAGFKSSTVAFADMFAGSKVGLGTKVASV---- 57

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +T   LD A+    +F + ++  G+  +R+G+F +  + ++V+  G + 
Sbjct: 58  -VQDFNDGTTTNTSRGLDVAISSAGFFRMADANGGVFYSRNGQFTLDQNRNIVNMQGLHL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q             +   K   T  + +   S   V+   +    +  
Sbjct: 117 TGYPATGTPPAVQTGANPVALSVPATAMTAKATTTAAITANLNSTDAVKNYANLNINDTT 176

Query: 183 PT 184
             
Sbjct: 177 TY 178


>gi|315453407|ref|YP_004073677.1| flagellar hook protein FlgE [Helicobacter felis ATCC 49179]
 gi|315132459|emb|CBY83087.1| flagellar hook protein, FlgE [Helicobacter felis ATCC 49179]
          Length = 601

 Score = 80.3 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 59/146 (40%), Gaps = 22/146 (15%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +     +     +  + +V++N++N +TVG+R    +F  +  +  N +        
Sbjct: 1   MNDTILNAYSGIKTHQFGIDSVSNNIANINTVGYRRNDPEFKSLFASHLNTLGGNTVTAN 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA---------------LESPRGI 98
            +    A+G   +S + G ++ + ++ + A +G  WF                 +  +  
Sbjct: 61  DRNYGAAAGGNAISSKDGEYMPSDSDFNMAYQGSGWFIVGPNKNGSMQINKDGYQQAQEN 120

Query: 99  ILTRDGRFKVTDDGSLVSASGKYPVL 124
             TRDG F    DG +V++ G Y   
Sbjct: 121 FYTRDGNFLRDADGYIVNSHGYYVYG 146



 Score = 66.8 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 17/141 (12%), Positives = 44/141 (31%), Gaps = 17/141 (12%)

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
            +       D     +    + +   V      +   + +  +G+ +    QG  +  ++
Sbjct: 458 DSKIYQISQDGKPKGLLANMRIDDDGVIHLIFTNGALETMGRVGIATFINDQGLKKVGSN 517

Query: 176 ----------GISPNIPPTPLEDL-------SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
                     G +  +   P+              V   +LE SN N+ + +  +I + +
Sbjct: 518 LFDIQNATVNGRAAPLSGNPIIGWDRDDGKLKFGKVMHKYLETSNVNAGHSLTNLILMQR 577

Query: 219 KFNSITTLIDENEKSMLEAIR 239
            ++         +  + EAI 
Sbjct: 578 GYSMNAKAFTTGDDLIKEAIN 598


>gi|167644975|ref|YP_001682638.1| hypothetical protein Caul_1010 [Caulobacter sp. K31]
 gi|167347405|gb|ABZ70140.1| protein of unknown function DUF1078 domain protein [Caulobacter sp.
           K31]
          Length = 556

 Score = 80.3 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 56/135 (41%), Gaps = 7/135 (5%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
            ++   G++  ++    L+ ++DN++N +TVG++     FS +V A           V +
Sbjct: 4   NSAMLAGVSGLISNSSALAAISDNIANVNTVGYKRSSANFSTLVTAQSKSATYSAGGVKA 63

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-------IILTRDGRFKVTDDGSL 114
                  + G   ST + LD ++ G  +F                 TR G F++ + G L
Sbjct: 64  QTHQFVSQQGLTQSTTSNLDLSIAGSGFFVGTEKPEGLTATDTRSFTRAGSFQLDNLGYL 123

Query: 115 VSASGKYPVLDMASV 129
            + +G Y    +A  
Sbjct: 124 KNDAGLYLQGWLADP 138



 Score = 71.1 bits (172), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 10/90 (11%), Positives = 28/90 (31%), Gaps = 5/90 (5%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYE 209
           IA + + +     G      +                      ++    LE S  +   E
Sbjct: 464 IAQVAIATFSNPNGLKGVNGNAYRVTNESGTYSLKTPGGGGAGSIAPSTLEASTVDLSTE 523

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              +I   + +++ + +I   ++ + E + 
Sbjct: 524 FTGLITTQRAYSASSKIITTADQMLEELLS 553


>gi|194428463|ref|ZP_03061003.1| flagellar hook protein FlgE [Escherichia coli B171]
 gi|194413515|gb|EDX29797.1| flagellar hook protein FlgE [Escherichia coli B171]
          Length = 396

 Score = 80.3 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 71/195 (36%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ +LV+  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q+                K   T  +     S   +       + N  
Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNAD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 177 SYNKKGSVTVFDSQG 191


>gi|114707045|ref|ZP_01439944.1| flagellar hook protein E [Fulvimarina pelagi HTCC2506]
 gi|114537595|gb|EAU40720.1| flagellar hook protein E [Fulvimarina pelagi HTCC2506]
          Length = 390

 Score = 80.3 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/160 (21%), Positives = 61/160 (38%), Gaps = 4/160 (2%)

Query: 7   IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66
             ++   A   +LS V+DN++N+ T G++   V+FS +V       +     V S   Y 
Sbjct: 9   TSVSGMNAQSNKLSAVSDNIANSATTGYKRADVEFSSLVINSGGRGNYTSGSVLSQTRYD 68

Query: 67  SKEVGSFISTGTELDFALEGDAWF-ALESPRGIILTRDGRF---KVTDDGSLVSASGKYP 122
               G   +T ++ D A+ GD +F   +       TR G F      D G     +    
Sbjct: 69  ISTQGLVTTTSSKTDLAISGDGFFVVEDQNGQPFFTRAGSFVQRTEPDTGETFLVNAAGY 128

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162
            L   + P+Q+P  + +               +   G ++
Sbjct: 129 KLTGQNGPVQVPVGEIVAPQATTTSELSMQLPLNGTGTHT 168



 Score = 70.3 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 10/96 (10%), Positives = 28/96 (29%), Gaps = 5/96 (5%)

Query: 149 SQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSN 203
           + +   +  + L              +   P+      +           +  G LE+SN
Sbjct: 292 TGRQIELDRIQLARFQSPDQLDVISGNVFRPSQLSGDPQFGFSGELGFGDLISGALEESN 351

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +   E+  MI   + + + +       + +   + 
Sbjct: 352 VDLASELTDMIVTQRSYAANSKTFQTGSEMLDLLVN 387


>gi|161777623|ref|YP_427619.2| flagellar hook protein FlgE [Rhodospirillum rubrum ATCC 11170]
          Length = 460

 Score = 80.3 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 55/127 (43%), Gaps = 3/127 (2%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
           +S N+ ++A  A    +S +++N++N+ T+G++T    F  +V    +  +   + V + 
Sbjct: 6   SSLNVAVSAMNAQSSSVSAISNNLANSSTIGYKTSNASFYSLVTGTGSTSNFTGAGVVAS 65

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALES---PRGIILTRDGRFKVTDDGSLVSASG 119
                   G  + T    D A++G   F +        +  TR G F    DG LV+++ 
Sbjct: 66  ATQNVINQGVIVGTQNVTDLAVDGKGMFIVTDRSGSNELYYTRAGDFYPNADGDLVNSNN 125

Query: 120 KYPVLDM 126
            Y     
Sbjct: 126 YYLQGYP 132


>gi|149195336|ref|ZP_01872423.1| flagellar hook protein [Caminibacter mediatlanticus TB-2]
 gi|149134528|gb|EDM23017.1| flagellar hook protein [Caminibacter mediatlanticus TB-2]
          Length = 634

 Score = 80.3 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 62/171 (36%), Gaps = 4/171 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK---IS 57
           M TSF  G++  ++ +  L    DN++N +T GF+    +F+ +     ++         
Sbjct: 1   MTTSFYNGVSGLISFQNGLDIWGDNIANINTPGFKESIPEFATIFSQTLSNASPTSDIGL 60

Query: 58  FVASGKEYLSKEVGSFISTGTELDFALEGDA-WFALESPRGIILTRDGRFKVTDDGSLVS 116
                       +G+ + +    D A+  +  +  +        TR+G F    +G LV+
Sbjct: 61  GSLLHSTAKDMSIGNIVDSDNPFDIAIADEKGFLGVSYNGETFYTRNGNFTRDANGFLVN 120

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
            SG Y ++  A+  I+      +        +             +V +  
Sbjct: 121 DSGAYLLVANANNLIKTENGYIVNRDINTDNLLPTNTFSPISLPNNVILPA 171



 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 18/203 (8%), Positives = 52/203 (25%), Gaps = 6/203 (2%)

Query: 43  EVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTR 102
           + +    N   + +    +  +          +  T  DF  + + +             
Sbjct: 429 DKIPVTINFTKKSVLNNTTIWKGTISINTPTQNITTTQDFTFDSNGFLLSPKEISFNNIN 488

Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162
                 +   +  +A+      D          + +          + +      + ++ 
Sbjct: 489 FRFNISSFAKTDTNATNYSFNQDGVEEGFLQNYQIDENGKIIGIFSNNQDITFGQIPIFH 548

Query: 163 VDMSQGFVRRENSGISPNIPPT------PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
               QG     ++                        +    LE SN N    M ++I  
Sbjct: 549 FQNPQGLENIGSNLFRETSNSNKAFLYTNENGSYIGKLLPSKLETSNVNMSQAMTELIVT 608

Query: 217 TQKFNSITTLIDENEKSMLEAIR 239
            + F +    +  +++ + +AI 
Sbjct: 609 QKAFQASAKTVTTSDEMIQKAIN 631


>gi|227874517|ref|ZP_03992687.1| flagellar basal body rod protein FlgG [Oribacterium sinus F0268]
 gi|227839636|gb|EEJ50096.1| flagellar basal body rod protein FlgG [Oribacterium sinus F0268]
          Length = 305

 Score = 80.3 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/306 (12%), Positives = 81/306 (26%), Gaps = 99/306 (32%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50
           M  + +  +A   A + +L  + +N++N +T GF++    F + +    +          
Sbjct: 1   MLRAMDSAVAGLRAHQNKLDVIGNNIANVNTFGFKSQGYSFKDTMYQTSSTSSGGKQEAS 60

Query: 51  --------DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI---- 98
                   +  Q      +G         +    G   + ++ G  +F   +        
Sbjct: 61  GNATIGGANPAQYGYGSLTGSIATDFTSSTPSYVG-GFNASINGSGFFVTSASNKEVTLD 119

Query: 99  ----------------ILTRDGRFKVTDDGSLVSASGKYPVL------------------ 124
                             TR G+F V  +G +V A+  +                     
Sbjct: 120 PANTKTTTAEMKKNNFAYTRVGQFSVDANGYIVDANHNFVYGFQPDSLTEPTKYGDGGKK 179

Query: 125 -----------------------------------DMASVPIQIPQKDEIFNVGEKGEIS 149
                                                  +   I         G   +++
Sbjct: 180 LVALRAPAADNTGAVALTGSPVFTGFAAQLKSVEIGADGIVKGIIDNKTPGTGGAPAQVT 239

Query: 150 QKGKVIATMGLYSVDMSQGFVRRENSGISP-------NIPPTPLEDLSGVTVKRGFLEDS 202
               V+  + + S    +G  +  N+  +         I  T   + S  T+  G+LE S
Sbjct: 240 STSIVLGKVAVASFQNQEGLTKAGNNTFNAGVGDNTGYISATMPGEGSTPTLMAGYLEAS 299

Query: 203 NANSMY 208
           N +   
Sbjct: 300 NVDLAK 305


>gi|163793271|ref|ZP_02187246.1| flagellar basal body FlaE domain protein [alpha proteobacterium
           BAL199]
 gi|159181073|gb|EDP65588.1| flagellar basal body FlaE domain protein [alpha proteobacterium
           BAL199]
          Length = 433

 Score = 80.3 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 69/186 (37%), Gaps = 7/186 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
               G++A  A  Q    ++DN++N +T+G++    +F  +V    +        V +  
Sbjct: 6   GMFSGVSALAAQSQAFGIISDNIANVNTIGYKDTTARFQTLVTESSSSSRYSPGGVLARP 65

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-------ILTRDGRFKVTDDGSLVS 116
               ++ G    T +  D +L GD +F +             +LTR G F   ++G+LV+
Sbjct: 66  FVNPEKQGLLQGTTSNTDISLVGDGFFIVNENDDPLTSGGEYLLTRAGSFTEDEEGNLVN 125

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           A+G +           I   +    +     ++  G    +    + +++        + 
Sbjct: 126 AAGFFLQGWRTDSTGTIVNSNTKDQLSSLETVNLAGFTSVSNPSSTANLAVNLPANATTA 185

Query: 177 ISPNIP 182
            +    
Sbjct: 186 STQTTN 191



 Score = 61.8 bits (148), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 22/50 (44%)

Query: 190 SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
               ++   LE S  +   E   +I   + +++ T LI   ++ + E IR
Sbjct: 381 GAGAIESSALEQSTVDLSDEFTDLIITQRAYSAATKLITTGDELLDEIIR 430


>gi|94312669|ref|YP_585878.1| flagellar hook protein [Cupriavidus metallidurans CH34]
 gi|93356521|gb|ABF10609.1| flagellar hook protein [Cupriavidus metallidurans CH34]
          Length = 415

 Score = 80.3 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/161 (24%), Positives = 66/161 (40%), Gaps = 7/161 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
            F  G++   A    L  + +N++N +TVGF+    +F++V    K  +  +++ V    
Sbjct: 2   GFGQGVSGLNAAASNLDVIGNNIANANTVGFKQSTAQFADVYAGSKIGLGTRVNSV---- 57

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFAL--ESPRGIILTRDGRFKVTDDGSLVSASGKY 121
              S   G+  STG  LD A+     F     +  G+  +R+G+F+  DDG LV+ASG  
Sbjct: 58  -VQSFTNGNISSTGRNLDVAISNGNGFFRLASTDGGVYYSRNGQFQRLDDGRLVNASGLQ 116

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162
                A           I     +        + A   L S
Sbjct: 117 VTGYPAGTTAGGVAPQPIVISNAQMPPQATTNIKAQFQLDS 157



 Score = 72.2 bits (175), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 13/97 (13%), Positives = 36/97 (37%), Gaps = 4/97 (4%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPL----EDLSGVTVKRGFLEDS 202
             +++ K +  + + +   ++G     N+  S               S  T++ G +E+S
Sbjct: 318 FSNEQTKSLGQIAMAAFGNAEGLKPEGNNVWSATGASGQELLGVAGGSMGTLQSGSVEES 377

Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           N +   ++  +I   + + +    I   +  M   + 
Sbjct: 378 NVDLSGQLVNLIVAQRNYQANAQTIKAQDTVMQTLVN 414


>gi|163850123|ref|YP_001638166.1| flagellar hook protein FlgE [Methylobacterium extorquens PA1]
 gi|163661728|gb|ABY29095.1| protein of unknown function DUF1078 domain protein
           [Methylobacterium extorquens PA1]
          Length = 403

 Score = 79.9 bits (195), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 65/181 (35%), Gaps = 1/181 (0%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
              G++   A   R+STVA+N+ N  T G++    +FS ++    +  +     V +   
Sbjct: 7   LRTGVSGMNAQSNRISTVAENIQNASTTGYKRTSAEFSSLLLDSGDVGNYNSGAVETTLR 66

Query: 65  YLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYPV 123
               E G   ST ++ D A++G+ +F +        +TR G F V      +  +G + +
Sbjct: 67  RSVSEGGPIASTNSDKDLAIQGNGFFVVSDAAGAPFMTRAGNFVVDGKTGNLVNAGGFTL 126

Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183
           +  +                +   +S  G+        +V  +  F        +     
Sbjct: 127 MGYSLANGTPNPVLNGVADLKPVNVSVMGQEARPSTAATVSGNLSFETPVYDPTATGAIG 186

Query: 184 T 184
            
Sbjct: 187 Y 187



 Score = 61.8 bits (148), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 18/193 (9%), Positives = 45/193 (23%), Gaps = 7/193 (3%)

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113
           Q     A+       +  +  ++    +   +G+          + +       V   G 
Sbjct: 208 QMTKTAANTWSVEFFDPAAPTTSLGTTNVTFDGNGKVNGGGSALVNVPNGRSIPVDLGGL 267

Query: 114 LVSASGKYPVLDMAS--VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171
              +                                     K    + L  V        
Sbjct: 268 TQLSGDHNLSGTANGSSPTSVSGTAFGEDGTVYAVYTDGTRKAAFKVPLADVASPDNLAP 327

Query: 172 RENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
           R  +  + +     ++           +K G LE SN +   E+  MI     + + + +
Sbjct: 328 RAGNVFTTSAESGDIQVGFAGQGGRGILKAGALEQSNVDVSTELTTMIESQTVYTANSKV 387

Query: 227 IDENEKSMLEAIR 239
                + +   + 
Sbjct: 388 FMTGNELLETLMN 400


>gi|74101658|gb|AAZ99748.1| FlgEL [Aeromonas hydrophila]
          Length = 397

 Score = 79.9 bits (195), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/147 (23%), Positives = 60/147 (40%), Gaps = 6/147 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SF+IGL+   A+ Q LS +++N++N  T GF++ + +F+ +         Q      +  
Sbjct: 2   SFSIGLSGLRAVNQELSVISNNVANASTAGFKSSRAEFAAIY-----GGGQAGGVEMNNV 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G    TG  LD A+ G  +F L+        TR G F+   +  L +ASG   
Sbjct: 57  SQNFDRNGDVTRTGRGLDLAISGSGFFVLKDSNGQTSYTRAGMFQRDPNNYLTTASGTRL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEIS 149
                +   ++          + G + 
Sbjct: 117 QGYTTNDAGELQSGVVGDIQVKAGSLP 143



 Score = 68.0 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 10/94 (10%), Positives = 29/94 (30%), Gaps = 5/94 (5%)

Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNAN 205
           +  +   + + +     G ++  N+    +         +  T     +  G  E SN +
Sbjct: 302 QSLLQGQVVMANFTNPNGLMQTNNTTWQQSFSSGQPVLGAPGTGTMGSLTAGAYESSNVD 361

Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              E+  ++   + + +    I   +K       
Sbjct: 362 LTGELVSLMTSQRNYQANAKTISSADKMTQVLFN 395


>gi|23008562|ref|ZP_00049955.1| COG4786: Flagellar basal body rod protein [Magnetospirillum
           magnetotacticum MS-1]
          Length = 126

 Score = 79.9 bits (195), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 51/125 (40%), Gaps = 15/125 (12%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55
             +  I      A +  L  +A+N++N +T GF+  + +F++++   +            
Sbjct: 1   MRALAIAATGMSAQQLNLEVIANNIANLNTTGFKGARAEFTDLLYQAERQQGVPNQAGQE 60

Query: 56  --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106
                      V +         GS  +TG +LD A+ G  +F + SP G +  TR G F
Sbjct: 61  AVPEGAMLGLGVRAAAIRNLHRQGSLANTGNQLDLAVNGRGYFQITSPAGEVNYTRAGSF 120

Query: 107 KVTDD 111
              ++
Sbjct: 121 NKNNN 125


>gi|330975976|gb|EGH76042.1| flagellar hook protein FlgE [Pseudomonas syringae pv. aptata str.
           DSM 50252]
          Length = 442

 Score = 79.9 bits (195), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 52/134 (38%), Gaps = 4/134 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA----IKNDIDQKISFV 59
           SFNIGL    A  + L    +N++N  T GF++ + +F++           + +      
Sbjct: 2   SFNIGLCGLYAANKSLDVTGNNIANVATTGFKSSRAEFADQYAQSIRGTSGNTNVGSGVR 61

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119
            +       +      T   LD A+ GD +F + +    + TR G F    +G +V++S 
Sbjct: 62  TAAVSQQFSQGSLTTGTANSLDLAINGDGFFMMSNNGEKLYTRAGAFHTDKEGYVVNSSN 121

Query: 120 KYPVLDMASVPIQI 133
                        +
Sbjct: 122 MKLQGYNVDANGSV 135



 Score = 63.7 bits (153), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 30/98 (30%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLED 201
             + K +VI    L S    QG  +   +                +  +   +    LE+
Sbjct: 343 YTNGKSQVIGQTSLTSFANVQGLAQAGGTNWRETFASGVPVSGAPQSGTLGYITGQALEE 402

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E+  +I     + +    I      M   I+
Sbjct: 403 SNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQTTIQ 440


>gi|239906013|ref|YP_002952752.1| flagellar hook protein FlgE [Desulfovibrio magneticus RS-1]
 gi|239795877|dbj|BAH74866.1| flagellar hook protein FlgE [Desulfovibrio magneticus RS-1]
          Length = 550

 Score = 79.9 bits (195), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/139 (22%), Positives = 54/139 (38%), Gaps = 17/139 (12%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---DIDQKISFVA 60
           S   G++  LA   ++ T+ +N++N +T GF+  +  F +++ A       + Q    V 
Sbjct: 8   SMWSGVSGLLANSTKMGTIGNNLANVNTYGFKGARTDFMDLMSANVGTAAGVKQIGRGVR 67

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI--------------ILTRDGRF 106
            G        G   +T   LD A+ G+ +F ++    +                TR G F
Sbjct: 68  VGTIVSDYSQGGLETTSENLDMAISGNGFFMVKQKSQVGSNGKMLNTGNTTTYYTRAGDF 127

Query: 107 KVTDDGSLVSASGKYPVLD 125
               DG LV+  G      
Sbjct: 128 SFDSDGYLVTPQGLAVQGW 146



 Score = 75.7 bits (184), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 27/213 (12%), Positives = 60/213 (28%), Gaps = 10/213 (4%)

Query: 32  VGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA 91
            G+      F  V  A   D    ++   +     +       +       A        
Sbjct: 340 NGYPVFTANFKSVSDASFTDSPNALNIAFNVGISNTTGFQPGATGTLLSAAAAHDPDELV 399

Query: 92  LESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQK 151
             +P    +            S V +S         +  +      +   +      + +
Sbjct: 400 SFNPSTTKVNSTVTTSYATSSSTVFSSQN-----GYTSGLLTSVSVDSDGILTGTFSNGQ 454

Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANS 206
            + +  + L +    QG  R+ ++  +  +             S  ++    LE SN + 
Sbjct: 455 TQKLWALALANFTNLQGLSRQGSNLYAATLDSGQGTTNRANTGSVGSISGNTLETSNVDL 514

Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             EM  MI   + F + +  I   +  + E I+
Sbjct: 515 ATEMVSMILTQRGFEANSKTITTVDSMLSEVIQ 547


>gi|167579488|ref|ZP_02372362.1| flagellar hook protein FlgE [Burkholderia thailandensis TXDOH]
          Length = 413

 Score = 79.9 bits (195), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 61/189 (32%), Gaps = 2/189 (1%)

Query: 8   GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVASGKEY 65
           GL+        L  + +N++N +TVGF+    +FS++          +            
Sbjct: 6   GLSGLAGASSDLDVIGNNIANANTVGFKGSTAQFSDMYANSVASAVNNPIGIGTMLASVQ 65

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125
                G+  S+ + L+ A+ G+ +F + +   +  +RDG F+   +G +V++ G   +  
Sbjct: 66  QQFSQGTITSSTSSLNVAINGNGFFQMSNNGVLTYSRDGTFQRDKNGYIVNSQGLNLMGY 125

Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185
            A     I     +        I+       +                 +          
Sbjct: 126 QADKNGVINTAQTVPLQAPTNNIAPTATTKISGQFNLNSQDTVPTNTPFNYADSTTYNFQ 185

Query: 186 LEDLSGVTV 194
                  ++
Sbjct: 186 TAVQVYDSL 194



 Score = 66.0 bits (159), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 16/130 (12%), Positives = 41/130 (31%), Gaps = 9/130 (6%)

Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174
           V+   +            I    ++      G+ +  G+++    L + +   G V   N
Sbjct: 287 VTNLAQDGFASGTLTTFSIGNDGKVTGNYSNGQTATLGQIV----LANFNNPNGLVNVGN 342

Query: 175 SGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           +           +       +  T++   LE+SN +   ++  +I   + + +    I  
Sbjct: 343 NQYVETAASGVPQISAPGSTNHGTLQGSALENSNVDLTSQLVNLITAQRNYQANAQTIKT 402

Query: 230 NEKSMLEAIR 239
            +      I 
Sbjct: 403 QQTVDQTLIN 412


>gi|239817165|ref|YP_002946075.1| flagellar basal body FlaE domain protein [Variovorax paradoxus
           S110]
 gi|239803742|gb|ACS20809.1| flagellar basal body FlaE domain protein [Variovorax paradoxus
           S110]
          Length = 404

 Score = 79.9 bits (195), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 13/99 (13%), Positives = 33/99 (33%), Gaps = 6/99 (6%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI------PPTPLEDLSGVTVKRGFLE 200
             +++  ++  + L S     G      +     +        TP       ++  G LE
Sbjct: 304 FSNEQTTLMGQVVLTSFANPNGLEPMGENVWGETLASGQPLTGTPGAGTKQGSLASGALE 363

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            SN +   E+  +I   + + +    +   ++ +   I 
Sbjct: 364 ASNVDLTSELVNLIVAQRSYQANAQTVKTQDQVVQTLIN 402



 Score = 77.6 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 64/154 (41%), Gaps = 7/154 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
            F+ G++   A    L  + +N++N+ TVGF++    F +V         +    VA   
Sbjct: 2   GFSQGISGLSAAAANLDVIGNNIANSGTVGFKSGAATFQDVYA-----GSRVGLGVAVSG 56

Query: 64  EYLSKEVGSFISTGTELDFAL-EGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGKY 121
              +   GS  ++   LD A+  GD +F L SP G  + +R+G+F    DG +V+A+G  
Sbjct: 57  IVQNFTQGSVQTSSRPLDVAILNGDGFFRLSSPSGEVMYSRNGQFTRDKDGFIVNAAGLR 116

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI 155
                 S    +          +   +S K    
Sbjct: 117 LTGYGVSATGGLDGGTPGPLQVQTTAMSPKATTA 150


>gi|254559268|ref|YP_003066363.1| flagellar hook protein FlgE [Methylobacterium extorquens DM4]
 gi|254266546|emb|CAX22310.1| flagellar hook protein FlgE [Methylobacterium extorquens DM4]
          Length = 403

 Score = 79.9 bits (195), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 65/181 (35%), Gaps = 1/181 (0%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
              G++   A   R+STVA+N+ N  T G++    +FS ++    +  +     V +   
Sbjct: 7   LRTGVSGMNAQSNRISTVAENIQNASTTGYKRTSAEFSSLLLDSGDVGNYNSGAVETTLR 66

Query: 65  YLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYPV 123
               E G   ST ++ D A++G+ +F +        +TR G F V      +  +G + +
Sbjct: 67  RSVSEGGPIASTNSDKDLAIQGNGFFVVSDAAGAPFMTRAGNFVVDGKTGNLVNAGGFTL 126

Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183
           +  +                +   +S  G+        +V  +  F        +     
Sbjct: 127 MGYSLANGTPNPVLNGVADLKPVNVSVMGQEARPSTAATVSGNLSFETPVYDPTATGAIG 186

Query: 184 T 184
            
Sbjct: 187 Y 187



 Score = 61.8 bits (148), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 19/193 (9%), Positives = 46/193 (23%), Gaps = 7/193 (3%)

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113
           Q     A+       +  +  ++    +   +G+          + +    R  V   G 
Sbjct: 208 QMTKTAANTWSVEFFDPAAPTTSLGTTNVTFDGNGKVNNGGSALVDVPNGRRITVDLGGL 267

Query: 114 LVSASGKYPVLDMAS--VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171
              +                                     K    + L  V        
Sbjct: 268 TQLSGDHNLSGTANGSSPTSVSGTAFGEDGTVYAVYTDGTRKAAFKVPLADVASPDNLAP 327

Query: 172 RENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
           R  +  + +     ++           +K G LE SN +   E+  MI     + + + +
Sbjct: 328 RAGNVFTTSAESGDIQVGFAGQGGRGILKAGALEQSNVDVSTELTTMIESQTVYTANSKV 387

Query: 227 IDENEKSMLEAIR 239
                + +   + 
Sbjct: 388 FMTGNELLETLMN 400


>gi|311030122|ref|ZP_07708212.1| Flagellar hook protein FlgE [Bacillus sp. m3-13]
          Length = 493

 Score = 79.9 bits (195), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 25/226 (11%), Positives = 60/226 (26%), Gaps = 18/226 (7%)

Query: 32  VGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA 91
             F T     ++ + +   +  +    +               +T    D +       +
Sbjct: 265 TAFTTSAQNMNDGIDSFIGETGEVAYRMIDPVVQDPTIPMPTAATANVNDLSNLVSYAQS 324

Query: 92  LESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQK 151
           +++           F    +                 + I    +    +   K     +
Sbjct: 325 VKTSLDTAYKTFENFIAKAEMIQQPTWTDSLSGSPGLIQIPPNARSFSISGDGKVNFIDQ 384

Query: 152 G---KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE---------------DLSGVT 193
               KV   + L       G  R   +    +     ++               D    +
Sbjct: 385 FGDLKVAGQLMLAKFPNDAGLERIGENLFQQSNNSGTMDKNGDGIQLEEMFKPGDDGAAS 444

Query: 194 VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +  G LE SN +   E  +MI   + F + T +I  +++ + E + 
Sbjct: 445 IISGTLEMSNVDLSEEFTEMITAQRGFQANTRIITTSDEILQELVN 490



 Score = 77.6 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/177 (19%), Positives = 62/177 (35%), Gaps = 39/177 (22%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S    + A    + +L  + +N++N +T GF+  +  F E++    +          
Sbjct: 1   MLRSMYSSIGALRNFQTKLDVIGNNIANVNTYGFKKGRATFQEMMVQQLSGASGPAAGKG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF------------------ 90
                Q             +  GS  +T   LD AL GD +F                  
Sbjct: 61  GVNAKQIGLGSMISTIDTIQTQGSLQTTARPLDLALSGDGFFAVASIADVTRVNVDSDTN 120

Query: 91  ---------ALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDE 138
                    A+ +   +  TR G F + ++G +V+++G Y V +     I   Q  E
Sbjct: 121 YGDNKILGGAVNNAVAMNYTRSGNFYLDNNGYIVNSNGMYMVGETGEKRIPNDQIME 177


>gi|302387788|ref|YP_003823610.1| fagellar hook-basal body protein [Clostridium saccharolyticum WM1]
 gi|302198416|gb|ADL05987.1| fagellar hook-basal body protein [Clostridium saccharolyticum WM1]
          Length = 533

 Score = 79.5 bits (194), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 54/155 (34%), Gaps = 31/155 (20%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48
           M  S   G+A     + ++  + +N++N +T G++   + F + +               
Sbjct: 1   MVKSMFAGVAGLRTHQSKMDIIGNNIANVNTWGYKAASMSFKDTMYQTTSSSSGGSTKTG 60

Query: 49  ---KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES----------- 94
                +  Q    V +G        G    +   LD  ++G  +F +             
Sbjct: 61  GYGGTNAGQVGYGVTTGSISYDFGKGGMAPSANGLDCMIDGTGFFIVGPMINGGSLPLGE 120

Query: 95  -----PRGIILTRDGRFKVTDDGSLVSASGKYPVL 124
                  G+ L+R G+F+V  +G L   SG Y   
Sbjct: 121 EDALKSSGLYLSRVGKFQVDGNGYLTDDSGNYVYG 155



 Score = 71.8 bits (174), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 14/90 (15%), Positives = 33/90 (36%), Gaps = 4/90 (4%)

Query: 154 VIATMGLYSVDMSQGFVRRENS----GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYE 209
           V+  + L  V  + G  +        G +           +   +   +LE +  +   E
Sbjct: 441 VVGKIALAGVQNTGGLEKDSGYYYTLGANTGNVSVYEGGGTDGRILGNYLEQAKVDLATE 500

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           M +MI   + F + + +I   ++ + E + 
Sbjct: 501 MTEMITTQRGFQANSKIITVTDQMLDELVN 530


>gi|183598617|ref|ZP_02960110.1| hypothetical protein PROSTU_02017 [Providencia stuartii ATCC 25827]
 gi|188020796|gb|EDU58836.1| hypothetical protein PROSTU_02017 [Providencia stuartii ATCC 25827]
          Length = 406

 Score = 79.5 bits (194), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 39/98 (39%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISP-NIPPTPLE----DLSGVTVKRGFLED 201
             +Q+ +V+  + L +     G V +  +  +P N    P++          +  G LE 
Sbjct: 307 YSNQQKRVVGQVALSAFANPNGLVSQGGNVWAPSNASGNPMDGVPGVGQFGKLTSGALES 366

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E+  MI + + + S    I   ++ +   + 
Sbjct: 367 SNVDMSQELINMIVMQRNYQSNAQTIKTQDQMLQTMVN 404



 Score = 76.1 bits (185), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 51/126 (40%), Gaps = 6/126 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SF+  ++   A    L ++ +N++N+ T GF+     F+++       +      V    
Sbjct: 2   SFSQAVSGLNAASAGLDSIGNNIANSATNGFKGATTSFADMFAGSGVGL-----GVNVAA 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
              + + G    T    D A+ G+ +F   +    I  +RDG+F     G+LV+  G   
Sbjct: 57  VTQNFKDGPITRTDRPTDVAISGNGFFRVQDQNGDIFYSRDGQFIRDKSGNLVNNQGMTV 116

Query: 123 VLDMAS 128
               A 
Sbjct: 117 TGYPAG 122


>gi|300918678|ref|ZP_07135259.1| flagellar hook protein FlgE [Escherichia coli MS 115-1]
 gi|300414172|gb|EFJ97482.1| flagellar hook protein FlgE [Escherichia coli MS 115-1]
          Length = 401

 Score = 79.5 bits (194), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 72/195 (36%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ +LV+  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q+                K   T  +     S   +       + N  
Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNAD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +    V V +G
Sbjct: 177 SYNKKGSVTVFVSQG 191



 Score = 72.6 bits (176), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             +       +  +            +++ +++  + L +   ++G     ++  S    
Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 337

Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                       +  T+  G LE SN +   E+  MI   + + S    I   ++ +   
Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397

Query: 238 IR 239
           + 
Sbjct: 398 VN 399


>gi|261344142|ref|ZP_05971786.1| flagellar hook protein FlgE [Providencia rustigianii DSM 4541]
 gi|282567734|gb|EFB73269.1| flagellar hook protein FlgE [Providencia rustigianii DSM 4541]
          Length = 422

 Score = 79.5 bits (194), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 17/98 (17%), Positives = 38/98 (38%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISP-NIPPTPLE----DLSGVTVKRGFLED 201
             +Q+ +V+  + L +     G V +  +  +  N    P++          +  G LE 
Sbjct: 323 YSNQQKRVVGQIALSAFANPNGLVSQGGNVWASSNASGNPMDGVPGVGQFGKLTSGALES 382

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E+  MI + + + S    I   ++ +   + 
Sbjct: 383 SNVDMSQELISMIVMQRNYQSNAQTIKTQDQMLQTLVN 420



 Score = 77.6 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 51/124 (41%), Gaps = 6/124 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SF+  ++   A    L ++ +N++N+ T GF+     F+++       +      V    
Sbjct: 2   SFSQAVSGLNAASAGLDSIGNNIANSATNGFKGATTSFADMFAGSGVGL-----GVNVAA 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
              + + G    T    D A+ G+ +F   +    +  +RDG+F+    G+LV+  G   
Sbjct: 57  VTQNFKDGPITRTDRATDVAISGNGFFRVEDQNGDVFYSRDGQFQRDKSGNLVNNQGMVV 116

Query: 123 VLDM 126
               
Sbjct: 117 TGYP 120


>gi|317152080|ref|YP_004120128.1| flagellar hook-basal body protein [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316942331|gb|ADU61382.1| flagellar hook-basal body protein [Desulfovibrio aespoeensis
           Aspo-2]
          Length = 535

 Score = 79.5 bits (194), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 56/170 (32%), Gaps = 17/170 (10%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID--------- 53
           +S  +G    +A  +R+  VA+N++N  T+GF+     F +++ +               
Sbjct: 4   SSLYVGATGVVAHGERMQVVANNLANVSTIGFKKADALFGDLMSSQLGYGGGQFESGSSY 63

Query: 54  --QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR------GIILTRDGR 105
             Q    V+          G   +T T  D A+ G+ +F +              TR G 
Sbjct: 64  ASQMGQGVSMSAIRTVFAEGGLENTTTTTDLAITGNGFFGVRDTTAGGTMGASHYTRAGS 123

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI 155
           F+  +D  LV                 +             ++   G+ +
Sbjct: 124 FRFNNDAYLVDPHDFRLQGYAVDRETGVVATQVSDVQLPYEDVVIDGQPV 173



 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 14/89 (15%), Positives = 26/89 (29%), Gaps = 5/89 (5%)

Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEM 210
             +  Y      G  R   +            D         +  +  LE SN +   E 
Sbjct: 444 YQVANYRFASEWGLRRDGGNNFVATDASGAAMDGKALVGGRGSFVQNTLEMSNVDMAEEF 503

Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             MI   + + + T +I  ++  +   I 
Sbjct: 504 ASMIITQRGYQANTKVITTSDSLLNTLIS 532


>gi|289804814|ref|ZP_06535443.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Typhi str. AG3]
          Length = 65

 Score = 79.5 bits (194), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 24/56 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56
          M +S  I      A +  +  +A+N++N  T GF+  +  F +++         + 
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQS 56


>gi|309779447|ref|ZP_07674208.1| flagellar hook protein FlgE [Ralstonia sp. 5_7_47FAA]
 gi|308921688|gb|EFP67324.1| flagellar hook protein FlgE [Ralstonia sp. 5_7_47FAA]
          Length = 404

 Score = 79.5 bits (194), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 60/135 (44%), Gaps = 4/135 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA--IKNDIDQKISFVAS 61
            F  GL+   A  + L  +  N++N +TVG++    +F +V     +    +Q    V+ 
Sbjct: 2   GFQQGLSGLDAASKNLDVIGSNVANANTVGYKKSTAEFGDVYARSLVGASDNQIGQGVSV 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESP--RGIILTRDGRFKVTDDGSLVSASG 119
            K   +   G+   TG  LD A+ G  ++ +       +  TR+G+F+   +G ++SA+G
Sbjct: 62  TKVSQAFTQGNVTITGNPLDIAINGSGFYRMVDQGSGQVSYTRNGQFQTDKNGYVISATG 121

Query: 120 KYPVLDMASVPIQIP 134
           +           ++ 
Sbjct: 122 QNLTGYGVDSTGKVN 136



 Score = 71.8 bits (174), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 18/149 (12%), Positives = 43/149 (28%), Gaps = 10/149 (6%)

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQK-----GKVI 155
           T  G      D +  +  G        +       +   ++VG  G I+ +       V+
Sbjct: 254 TPTGMSISNIDFTGTTQYGGGYNDTTVTQDGYATGRLASYSVGTDGTITGRYSNGRTSVL 313

Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEM 210
             + + +    +G      +                   S   ++   +E SN +   E+
Sbjct: 314 GQIAMANFKAPEGLQNIGGNQWVETSNSGAPGLGTPGMGSFGLLQSSAVEQSNVDLSAEL 373

Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             MI   + + +    I   +  +   + 
Sbjct: 374 VNMIVAQRSYQANAQTIKTEDTILQTLVS 402


>gi|319406994|emb|CBI80631.1| Flagellar hook protein FlgE [Bartonella sp. 1-1C]
          Length = 402

 Score = 79.5 bits (194), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 65/182 (35%), Gaps = 12/182 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M      G++   A   RLS VADN++N  T+G++   V+FS  V             V 
Sbjct: 6   MMR---TGVSGMNAQGTRLSGVADNVANAGTIGYKRTDVQFSNYVTP-SGKYAYVPGGVK 61

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           S   +     G   +TG   D  + G+ +F +        LTR G F    DG L + +G
Sbjct: 62  SHIGHDVSIGGPARATGRSGDTMIHGNGFFRVADENGKEFLTRAGSFIRDKDGYLRNTAG 121

Query: 120 KYPVLDM-------ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172
            Y + +                 +       +         V    G  + +  + + ++
Sbjct: 122 YYLLNEDGEKIQIKGGPTDLFGPEATTKIDFKANFNPSAKVVEPKDGTINPENPETYSQK 181

Query: 173 EN 174
           ++
Sbjct: 182 KS 183



 Score = 75.7 bits (184), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 51/167 (30%), Gaps = 11/167 (6%)

Query: 84  LEGDAWFALESPRGIILTRDGRFKVTDDG--SLVSASGK----YPVLDMASVPIQIPQKD 137
           +E    F L  P     T +        G  SLV+  G         D            
Sbjct: 233 IEPTKEFKLTLPDSEGNTFEVNVNFGGVGADSLVTQKGNLFAFEGEADGMESGAFDGFTF 292

Query: 138 EIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV----- 192
                 E    +QK + I  +G+ +V  +        +    N    P            
Sbjct: 293 GKNGEIEVMYSNQKTRTIGYIGVTTVASTDSLTFLGGTVFETNSQTGPQMMGRPGDGVFG 352

Query: 193 TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           T+  G+LEDSN +   E+  MI   + + + + +     + M   + 
Sbjct: 353 TLSSGYLEDSNVDMGDELTDMIEAQRNYTANSKVFQTGSELMDVIVN 399


>gi|310767290|gb|ADP12240.1| flagellar hook protein FlgE [Erwinia sp. Ejp617]
          Length = 402

 Score = 79.5 bits (194), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 29/237 (12%), Positives = 67/237 (28%), Gaps = 24/237 (10%)

Query: 25  NMSNTD-----TVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTE 79
           N +N +     T   ++    F  +     + ++      A     +     S  + G +
Sbjct: 166 NYANLNINDSTTYNAKSSMTAFDSL--GNAHTVNLYFVKTADNNWTVHPVDASTGTAGAD 223

Query: 80  LDFALEGDAWFALESPRGIILTRD--------GRFKVTDDGSLVSASG----KYPVLDMA 127
            +     +      +   +  T              V   GS    +G      P  D  
Sbjct: 224 TNLVFNSNGQLVTPNNGQVSFTMGQLNGSNGPTTLNVNLTGSQQQNNGKSTFGNPTQDGY 283

Query: 128 SVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPL- 186
                   +            +++ +V+  + L +    +G     ++  S +       
Sbjct: 284 KPGELTSYQINDDGTLVGTYSNEQTQVLGQIVLSNFANPEGLKSEGDNVWSASAASGQAL 343

Query: 187 ----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
                  +  T+  G LE SN +   E+  MI   + + S    I   ++ +   + 
Sbjct: 344 SGIAGTGNLGTLTAGALESSNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400



 Score = 70.3 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 71/182 (39%), Gaps = 6/182 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
            F+  ++   A    L  + +N+SN+ T GF++  V F+++    K  +  K++ V    
Sbjct: 2   GFSQAVSGLNAASSNLDVIGNNISNSATAGFKSSTVAFADMFAGSKVGLGTKVASV---- 57

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +T   LD A+    +F + ++  G+  +R+G+F +  + ++V+  G + 
Sbjct: 58  -VQDFNDGTTTNTSRGLDVAISSAGFFRMADANGGVFYSRNGQFTLDQNRNIVNMQGLHL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q             +   K   T  + +   S   V+   +    +  
Sbjct: 117 TGYPATGTPPTVQTGANPVALSVPATAMAAKATTTAAMTANLNSTDAVKNYANLNINDST 176

Query: 183 PT 184
             
Sbjct: 177 TY 178


>gi|302037613|ref|YP_003797935.1| flagellar hook protein FlgE [Candidatus Nitrospira defluvii]
 gi|300605677|emb|CBK42010.1| Flagellar hook protein FlgE [Candidatus Nitrospira defluvii]
          Length = 407

 Score = 79.5 bits (194), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 30/136 (22%), Positives = 57/136 (41%), Gaps = 4/136 (2%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV---GAIKNDIDQKISF 58
            TS    +    +    +  + +N++N  T GF++ +  FS+++       +  DQ    
Sbjct: 4   LTSMFTAVTGLSSYGNAMGVIGNNIANVGTAGFKSSRATFSDLISSSLGGGSGSDQIGLG 63

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSA 117
           V       +   GS  +TG   D A++G+ ++ + +       +R G+FKV   G +V +
Sbjct: 64  VFLNDVQTNFSQGSMTTTGNTFDLAIDGNGFYLVRNTSGANFYSRAGQFKVDSLGQVVDS 123

Query: 118 SGKYPVLDMASVPIQI 133
           SG       A     I
Sbjct: 124 SGALLQGYQADTNGNI 139



 Score = 78.0 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 17/123 (13%), Positives = 37/123 (30%), Gaps = 5/123 (4%)

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
              D  S         +          + + + +A + L       G V   ++     +
Sbjct: 282 QTQDGYSSGTLDRISVDKEGRVMAQFTNGETRALAQVVLSRFTNPDGLVNVGDNHFLETV 341

Query: 182 PPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                   +        V  G +E SN +   E   MI   + F + +  I  +++ + E
Sbjct: 342 ESGAALAGAPTINGLGRVLSGTVEQSNVDLGKEFVDMIITQRAFQANSRAITTSDEMLQE 401

Query: 237 AIR 239
            + 
Sbjct: 402 LVN 404


>gi|330889080|gb|EGH21741.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           mori str. 301020]
          Length = 100

 Score = 79.5 bits (194), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 11/100 (11%), Positives = 32/100 (32%), Gaps = 5/100 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLED 201
                 ++I  +         G      +           +  +          +  LE+
Sbjct: 1   PPPATPQIIGNIQTADFINPAGLQAIGGNLYLETGSSGAPQIGTPGLNGLGPTLQNTLEN 60

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           SN +++ E+  MI   + +   + +I   ++ +    +N+
Sbjct: 61  SNVSTVEELVNMITTQRAYEMNSKVISTADQMLQNLTQNL 100


>gi|259908812|ref|YP_002649168.1| flagellar hook protein FlgE [Erwinia pyrifoliae Ep1/96]
 gi|224964434|emb|CAX55943.1| Flagellar biosynthesis, hook protein [Erwinia pyrifoliae Ep1/96]
 gi|283478794|emb|CAY74710.1| flgE [Erwinia pyrifoliae DSM 12163]
          Length = 402

 Score = 79.5 bits (194), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 29/237 (12%), Positives = 67/237 (28%), Gaps = 24/237 (10%)

Query: 25  NMSNTD-----TVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTE 79
           N +N +     T   ++    F  +     + ++      A     +     S  + G +
Sbjct: 166 NYANLNINDSTTYNAKSSMTAFDSL--GNAHTVNLYFVKTADNNWTVHPVDASTGTAGAD 223

Query: 80  LDFALEGDAWFALESPRGIILTRD--------GRFKVTDDGSLVSASG----KYPVLDMA 127
            +     +      +   +  T              V   GS    +G      P  D  
Sbjct: 224 TNLVFNANGQLVTPNNGQVSFTMGQLNGSNGPTTLNVNLTGSQQQNNGKSTFGNPTQDGY 283

Query: 128 SVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPL- 186
                   +            +++ +V+  + L +    +G     ++  S +       
Sbjct: 284 KPGELTSYQINDDGTLVGTYSNEQTQVLGQIVLSNFANPEGLKSEGDNVWSASAASGQAL 343

Query: 187 ----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
                  +  T+  G LE SN +   E+  MI   + + S    I   ++ +   + 
Sbjct: 344 SGIAGTGNLGTLTAGALESSNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400



 Score = 70.3 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 71/182 (39%), Gaps = 6/182 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
            F+  ++   A    L  + +N+SN+ T GF++  V F+++    K  +  K++ V    
Sbjct: 2   GFSQAVSGLNAASSNLDVIGNNISNSATAGFKSSTVAFADMFAGSKVGLGTKVASV---- 57

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +T   LD A+    +F + ++  G+  +R+G+F +  + ++V+  G + 
Sbjct: 58  -VQDFNDGTTTNTSRGLDVAISSAGFFRMADANGGVFYSRNGQFTLDQNRNIVNMQGLHL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q             +   K   T  + +   S   V+   +    +  
Sbjct: 117 TGYPATGTPPTVQTGANPVALSVPATAMAAKATTTAAMTANLNSTDAVKNYANLNINDST 176

Query: 183 PT 184
             
Sbjct: 177 TY 178


>gi|148980302|ref|ZP_01815989.1| flagellar hook protein E [Vibrionales bacterium SWAT-3]
 gi|145961321|gb|EDK26631.1| flagellar hook protein E [Vibrionales bacterium SWAT-3]
          Length = 408

 Score = 79.5 bits (194), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 75/202 (37%), Gaps = 11/202 (5%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SF+I L+   A    L+T+++N++N  T GF+  + +F+ V    +    + +    + +
Sbjct: 2   SFSIALSGLNASNSELNTISNNIANVSTTGFKESRTEFASVYSGSEAGGVEVVGVSQNFE 61

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSA----- 117
                + G+   TG  LD AL G+ +F LE  +   + TR G F +  DG + +      
Sbjct: 62  -----KSGTVTGTGRSLDMALSGNGFFVLEDSKGQTLYTRSGIFNMNADGVITANSGAAL 116

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177
            G     +   +   +          +  E      V        V  S       ++  
Sbjct: 117 QGYSVDGNNNLLLGSVGTVQISTASLQARETDSIEFVANLDAREQVPASAFDYSDSSTYN 176

Query: 178 SPNIPPTPLEDLSGVTVKRGFL 199
                P      +  TV + F+
Sbjct: 177 HSYTTPVYDSLGNPHTVSQYFV 198



 Score = 70.3 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 44/145 (30%), Gaps = 10/145 (6%)

Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-----EISQKGKVIATMG 159
              V  D S V+  G   V+   S             +   G       + + ++   + 
Sbjct: 262 SVTVNIDLSAVTQFGSDFVVSKNSPNGSTSGDYASVRMENDGRIFATYTNGQSQLQGQVV 321

Query: 160 LYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMI 214
           L      Q  ++  ++    +         +  +     +  G LE SN +   E+  ++
Sbjct: 322 LADFASPQNMIKTSDTAWLQSFSSGTPVLGTAGSGVFGDLTSGALEGSNVDLTSELVALM 381

Query: 215 HLTQKFNSITTLIDENEKSMLEAIR 239
              + + + T  I  +++       
Sbjct: 382 TAQRNYQANTKSISTSDQLTQALFN 406


>gi|319403978|emb|CBI77566.1| Flagellar hook protein FlgE [Bartonella rochalimae ATCC BAA-1498]
          Length = 402

 Score = 79.1 bits (193), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 35/127 (27%), Positives = 53/127 (41%), Gaps = 5/127 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M      G++   A   RLS VADN++N  T+G++   V+FS  V             V 
Sbjct: 6   MMR---TGVSGMNAQGTRLSGVADNVANAGTIGYKRTNVQFSNYVTP-SGQYAYVSGGVK 61

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           S   +     G   +TG   D  + G+ +F +        LTR G F    DG L + +G
Sbjct: 62  SHIGHDISIGGPARATGRSGDTMIHGNGFFRVADENGKEFLTRAGSFVRDKDGYLRNTAG 121

Query: 120 KYPVLDM 126
            Y + + 
Sbjct: 122 YYLLNED 128



 Score = 77.6 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 49/167 (29%), Gaps = 11/167 (6%)

Query: 84  LEGDAWFALESPRGIILTRDGRFKVTDDG--SLVSASGK----YPVLDMASVPIQIPQKD 137
           +     F L  P     T +        G  SLV+  G         D            
Sbjct: 233 IAPTKEFKLTLPDSEGNTFEVNVNFGGVGADSLVTQKGNLFAFEGEADGMESGAFDGFTF 292

Query: 138 EIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV----- 192
                 E    +QK + I  +G+ +V           +    N    P            
Sbjct: 293 GKNGEIEVMYSNQKTRTIGYIGVTTVASPDSLTFLGGTVFETNSQTGPQMMGRPGDGVFG 352

Query: 193 TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           T+  G+LEDSN +   E+  MI   + + + + +     + M   + 
Sbjct: 353 TLSSGYLEDSNVDMGDELTDMIEAQRNYTANSKVFQTGSELMDVIVN 399


>gi|75675292|ref|YP_317713.1| flagellar basal body rod protein, FlaE [Nitrobacter winogradskyi
           Nb-255]
 gi|74420162|gb|ABA04361.1| Flagellar basal body rod protein, FlaE [Nitrobacter winogradskyi
           Nb-255]
          Length = 613

 Score = 79.1 bits (193), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 54/139 (38%), Gaps = 11/139 (7%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           + N  +    A    L  ++ N++N  T G++ I   FS+++        Q    V +  
Sbjct: 6   ALNTSVGGLQAQSFALQNISGNIANAQTTGYKGITTAFSDLIPDSTAPNRQAAGGVTAYA 65

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRG-----------IILTRDGRFKVTDDG 112
                  G+  ++      A+ GD +F +++P G              TR G F+V   G
Sbjct: 66  TATISSQGTVSASTVGTYMAITGDGFFNVQAPTGRMDNQPQFSGVTYYTRRGDFQVDAGG 125

Query: 113 SLVSASGKYPVLDMASVPI 131
            LV+++G Y +        
Sbjct: 126 HLVNSAGYYLMGVPVDPKT 144



 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 13/127 (10%), Positives = 39/127 (30%)

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
           +A+      +  +             +      + +   +A + L   + +      +  
Sbjct: 487 NATINAINQNGYAAGQLQSVAVNNDGIVVGTFSNGQNLSLAQVSLSHFNGTNYLKALDGG 546

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
             +           +   +    LE SNA+   E  ++I   Q +++ T +I      + 
Sbjct: 547 AYAVTNESGSAIAGASGRISGSSLEGSNADIADEFTKLIVTQQAYSANTKVITTANSMVQ 606

Query: 236 EAIRNIA 242
           + +  + 
Sbjct: 607 DLLNVLR 613


>gi|254294563|ref|YP_003060586.1| hypothetical protein Hbal_2209 [Hirschia baltica ATCC 49814]
 gi|254043094|gb|ACT59889.1| protein of unknown function DUF1078 domain protein [Hirschia
           baltica ATCC 49814]
          Length = 458

 Score = 79.1 bits (193), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 66/198 (33%), Gaps = 7/198 (3%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
           ++   G A   A    ++  ++N++N +TVGF+ I+  F+ ++             V + 
Sbjct: 5   SALLAGTAGLRANASAMAATSENIANVNTVGFKRIRNDFTAMLNNQNYQSSYSAGAVRAT 64

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-------LTRDGRFKVTDDGSLV 115
              L +E G+  S+      A+ G+ +F   +  G          TR G+F   + G L 
Sbjct: 65  ATTLMREQGTLQSSSVSTHMAISGEGYFVTRARGGDATSFDEYSYTRAGQFAPDEGGYLK 124

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
           + +G+Y           +              +S  G V       S+  +    +  N 
Sbjct: 125 NTAGQYLYGWPIVNDQVVNASPTDLTALSAVRVSGYGGVAEASANLSITANLNADQEVNP 184

Query: 176 GISPNIPPTPLEDLSGVT 193
                            T
Sbjct: 185 ATYTAGDMAAGNITPDFT 202



 Score = 68.7 bits (166), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 11/98 (11%), Positives = 32/98 (32%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISP-----NIPPTPLEDLSGVTVKRGFLED 201
             +   + I  + + +     G + +            ++     +      V    LE 
Sbjct: 358 YTNGFSRKIFQVPVATFGNEGGLIAQAGGSYRSGPETGDMNLRAPKSGEAGEVISSALES 417

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           S  +   E   +I   + +++ + +I   ++ + E I 
Sbjct: 418 STVDLAEEFSNLIVTQRAYSAASKIITTADEMLNELIS 455


>gi|85715029|ref|ZP_01046014.1| Flagellar basal body rod protein, FlaE [Nitrobacter sp. Nb-311A]
 gi|85698226|gb|EAQ36098.1| Flagellar basal body rod protein, FlaE [Nitrobacter sp. Nb-311A]
          Length = 640

 Score = 79.1 bits (193), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 54/139 (38%), Gaps = 11/139 (7%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           + N  +    A    L  ++ N++N+ T G++ I   F +++        Q    V +  
Sbjct: 33  ALNTSVGGLQAQSFALQNISGNIANSQTTGYKGITTAFVDLIPDSTTPNRQVAGGVTAYA 92

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRG-----------IILTRDGRFKVTDDG 112
                  G+  ++      A+ GD +F +++P G              TR G F+V   G
Sbjct: 93  TPTISSQGTVSASTVGTYMAINGDGFFNVQTPTGRVDNQPQFSGVTYYTRRGDFQVDAHG 152

Query: 113 SLVSASGKYPVLDMASVPI 131
            LV+++G Y +        
Sbjct: 153 HLVNSAGYYLMGVAVDPKT 171



 Score = 71.4 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 13/127 (10%), Positives = 39/127 (30%)

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
           +A+      +  +             +      + +   +A + L   + +      +  
Sbjct: 514 NATINAINQNGYAAGQLQSVAINNDGIVVGTFSNGQNLSLAQVSLSHFNGTNYLKALDGG 573

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
             +      P    +   +    LE SN +   E  ++I   Q +++ T +I      + 
Sbjct: 574 AYAVTDESGPAIAGAAGHISGSSLEGSNTDIADEFTKLIVTQQAYSANTKVITTANSMVQ 633

Query: 236 EAIRNIA 242
           + +  + 
Sbjct: 634 DLLNVLR 640


>gi|253990127|ref|YP_003041483.1| flagellar hook protein FlgE [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253781577|emb|CAQ84740.1| flagellar hook protein flge [Photorhabdus asymbiotica]
          Length = 404

 Score = 79.1 bits (193), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 72/191 (37%), Gaps = 6/191 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N  T GF++    F+++         Q    V    
Sbjct: 2   AFSQAVSGLNAAAANLDVIGNNIANAATYGFKSSSAAFADIFA-----GSQVGLGVKMSG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASGKYP 122
              + + G+  +T   LD A+    +F ++ S   I  +R+G FK+ ++ ++++  G   
Sbjct: 57  INQNFKDGTPTTTNRTLDMAITQGGFFRMQSSDGTIRYSRNGEFKLDENRNIINMQGMKL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A        + +     E   ISQ           ++  +   + ++ +G      
Sbjct: 117 TGYPAVSVNGGAPEIQKGANPEPITISQDMLSAKATTKVTMTANLNSMHKKTTGAFSPEE 176

Query: 183 PTPLEDLSGVT 193
                  + VT
Sbjct: 177 ADSYNYTTSVT 187



 Score = 72.2 bits (175), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 15/123 (12%), Positives = 36/123 (29%), Gaps = 5/123 (4%)

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
           P  D  +       + E          + + +V+  + L +    +G   + ++      
Sbjct: 280 PKQDGYAAGKFNGYRIEKDGRVIGTYSNLQSQVLGQIVLTNFANPEGLAAQGDNVWVETG 339

Query: 182 PPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                            +    LE SN +   E+  MI   + + S    I   ++ +  
Sbjct: 340 ASGSSIIGIAGSGGFGELLSSTLEASNVDMSKELVNMIVAQRNYQSNAQTIKTQDQILQT 399

Query: 237 AIR 239
            + 
Sbjct: 400 LVS 402


>gi|313639076|gb|EFS04057.1| flagellar basal body rod protein FlgG [Listeria seeligeri FSL
           S4-171]
          Length = 239

 Score = 79.1 bits (193), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 40/231 (17%), Positives = 80/231 (34%), Gaps = 18/231 (7%)

Query: 23  ADNMSNTDTVGFRTIKVKFSEVVGAIKND---------IDQKISFVASGKEYLSKEVGSF 73
           ++N++N  T GF+  ++  SEV+   K +         +      V     +++   GS 
Sbjct: 2   SNNVANAQTPGFKFDQLT-SEVISKNKVNYQNNLVAKKVGTIDYGVRPAATHINLTAGSS 60

Query: 74  ISTGTELDFALE------GDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMA 127
             T  + DF ++      G  +F       I L+R G+F     G L +A G   +    
Sbjct: 61  YITNRDRDFFMQDANPEQGSNFFLTAKNGEISLSRGGQFHSDQFGFLRTADGANLLSATG 120

Query: 128 SVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ--GFVRRENSGISPNIPPTP 185
                  +             ++    +  +G   V   Q     +     +  N   T 
Sbjct: 121 EAVQVGVKTSIRAEANGDLYNAETNAYLGRLGTRFVSADQVDNLAKDGEGRLHVNGTNTM 180

Query: 186 LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                   ++ G LE SN +   EM Q++   +   +   +++  +K   +
Sbjct: 181 NLPAGQGIIQNGVLETSNVDLGVEMVQLMDNQRMVQASKNIVNMFDKVYDK 231


>gi|320179222|gb|EFW54180.1| Flagellar basal-body rod protein FlgG [Shigella boydii ATCC 9905]
          Length = 54

 Score = 79.1 bits (193), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 23/54 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54
          M +S  I      A +  +  +A+N++N  T GF+  +  F +++         
Sbjct: 1  MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGA 54


>gi|325109020|ref|YP_004270088.1| fagellar hook-basal body protein [Planctomyces brasiliensis DSM
           5305]
 gi|324969288|gb|ADY60066.1| fagellar hook-basal body protein [Planctomyces brasiliensis DSM
           5305]
          Length = 572

 Score = 79.1 bits (193), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 71/219 (32%), Gaps = 19/219 (8%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------KN 50
           ++    L      EQ +  + +N++N  T GF+   V F   +                 
Sbjct: 5   SALTTSLNGLALNEQTIDVLGNNIANAGTNGFKASSVLFETQLARTLSVGSRPTTENGGT 64

Query: 51  DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTD 110
           +  Q      S         GS  S+ +  D A++GD +F +    G + TR G F ++ 
Sbjct: 65  NPQQIGLGATSAAILTDFSQGSVTSSTSPSDLAIQGDGFFIVNGSNGNLYTRAGNFNLSS 124

Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF- 169
           + SLV+  G             +            G++    +        ++  +    
Sbjct: 125 EDSLVTPEGLRVQGYGVDEDFNLVTTQLADINIPLGDLVVAQQTRNVHIGGAMLSTGDLA 184

Query: 170 -----VRRENSGISPNIPPTPLEDLSGVTVKRG-FLEDS 202
                +R  +S  +        +  S  T+    ++E S
Sbjct: 185 TQSSILRSVDSLTAAASSTFAADPASAATLLNSLYVEGS 223



 Score = 59.5 bits (142), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/208 (11%), Positives = 61/208 (29%), Gaps = 12/208 (5%)

Query: 36  TIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP 95
                F  ++ ++ +     I    +        + +       +D     +        
Sbjct: 368 ASSTTFRYILESVDDSDSDTIVGTGTFTFDGEGVITNGAVQQFSID---RNNTAAVSPMQ 424

Query: 96  RGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI 155
             I  ++         GS ++   +            I +   I  + + G I   G+V+
Sbjct: 425 ISIDFSKLTGISTASAGSAITLQHQDGSNPGTLSRFVIDESGVINGIFDNGIIRTLGQVV 484

Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLEDSNANSMYEM 210
               L      QG +    +     +           +    T++ G +E SN +    +
Sbjct: 485 ----LARFSNPQGLLEAGGTNFQEGVSSGTPFLVTPGNFGAGTIRAGAIELSNTDIGRNL 540

Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAI 238
             +I  +  +     +ID  ++ + E +
Sbjct: 541 VDLIVASTNYRGNARVIDSVQQLVDELL 568


>gi|225620340|ref|YP_002721597.1| flagellar hook protein FlgE [Brachyspira hyodysenteriae WA1]
 gi|225215159|gb|ACN83893.1| flagellar hook protein FlgE [Brachyspira hyodysenteriae WA1]
          Length = 423

 Score = 79.1 bits (193), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 53/134 (39%), Gaps = 12/134 (8%)

Query: 19  LSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI------------DQKISFVASGKEYL 66
           +  V +N++N +T GF+  +V F +++    +               Q    +       
Sbjct: 1   MDVVGNNIANVNTYGFKRGRVTFKDMISQSLSGAAKPQEDRGGINPQQVGLGMMVATIDT 60

Query: 67  SKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDM 126
               G+   TG   D A++G+ +F  +       TR+G F +  DG LV+ S  Y V   
Sbjct: 61  IHTQGALQVTGVNTDLAIQGEGFFIEKRGNNSYYTRNGAFSLDKDGYLVNPSNGYKVQGW 120

Query: 127 ASVPIQIPQKDEIF 140
            +V      + E+ 
Sbjct: 121 NAVLNPETGEMELN 134



 Score = 75.3 bits (183), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 17/122 (13%), Positives = 38/122 (31%), Gaps = 5/122 (4%)

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
              D  ++ +      +          +   K +  + L   + + G  +  ++    + 
Sbjct: 298 IEQDGYTMGMLEGFSFDDSGQITGVFTNGNRKTLGQVALAKFNNAGGLEKAGDTLFVQSN 357

Query: 182 PPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                           ++K G LE SN +   +   MI   + F S    I   ++ + E
Sbjct: 358 NSGAANIGTAAAEGRGSIKAGTLEMSNVDLSEQFTDMIVTQRGFQSNARTITTADQMLQE 417

Query: 237 AI 238
            I
Sbjct: 418 VI 419


>gi|78219159|gb|ABB38508.1| flagellar hook protein FlgE [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 527

 Score = 79.1 bits (193), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 29/119 (24%), Positives = 48/119 (40%), Gaps = 5/119 (4%)

Query: 19  LSTVADNMSNTDTVGFRTIKVKFSEVVGA---IKNDIDQKISFVASGKEYLSKEVGSFIS 75
           ++ + +N++N +TVGF+  ++ F + +       +   Q    V  G  Y     GSF +
Sbjct: 1   MNVLGNNIANVNTVGFKGARMDFEDFISQDVNTASGTRQVGRGVGIGTIYGDFSQGSFET 60

Query: 76  TGTELDFALEGDAWFALESPRGI--ILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQ 132
           T    D A+ G  +FA+          TR G F+   +G LV   G          P  
Sbjct: 61  TTEATDLAIGGRGFFAVSPKGEETAYYTRAGNFRFDKEGYLVDPHGYVLQGWQIETPRP 119



 Score = 78.4 bits (191), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 55/216 (25%), Gaps = 8/216 (3%)

Query: 30  DTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAW 89
            T G+      FS +  +  + +       A                 T     +   + 
Sbjct: 311 STNGYPMFVANFSGI--SNASYVTPNPDPAAQPYIMELNLGLKNSDPSTWASAGVSNASL 368

Query: 90  FALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEIS 149
                     L      + +   S   +S              +       +   +G  S
Sbjct: 369 VGTNVANLPSLGNQAERQSSATTSFSGSSSTPTRYQDGYTFGFLQNVTVTRDGILQGRYS 428

Query: 150 QKGKV-IATMGLYSVDMSQGFVRRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSN 203
               + +  + LY         R   +  S +       P P       TV    LE SN
Sbjct: 429 NGAVLDLYQITLYDFQSKDNLRREGGNLFSESNASGLAAPGPANANGYGTVNSNSLEQSN 488

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +   E   MI   + F S + +I   +  +   I+
Sbjct: 489 VDLAKEFVNMITTQRGFQSNSKVITTTDTMLEVVIQ 524


>gi|17548566|ref|NP_521906.1| flagellar hook protein FlgE [Ralstonia solanacearum GMI1000]
 gi|17430814|emb|CAD17496.1| probable flagellar hook protein flge [Ralstonia solanacearum
           GMI1000]
          Length = 401

 Score = 79.1 bits (193), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 32/135 (23%), Positives = 58/135 (42%), Gaps = 4/135 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVAS 61
            F  GL+   A  + L  +  N++N +TVG++    +F +V          +Q    V  
Sbjct: 2   GFQQGLSGLDAASKNLDVIGSNVANANTVGYKKSTAEFGDVYARSLVGASDNQIGQGVDV 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPR--GIILTRDGRFKVTDDGSLVSASG 119
            K   S   G+   TG  LD A+ G  ++ +       +  TR+G+F+   +G ++SA+G
Sbjct: 62  TKVSQSFTQGNVTVTGNPLDIAINGTGFYRMVDASSGQVSYTRNGQFQTDKNGYIISATG 121

Query: 120 KYPVLDMASVPIQIP 134
           +           +I 
Sbjct: 122 QNLTGYGVDATGKIN 136



 Score = 71.4 bits (173), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 21/224 (9%), Positives = 57/224 (25%), Gaps = 25/224 (11%)

Query: 41  FSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL 100
           FS    A  N    +  +  +G  ++        + G ++   ++G           +  
Sbjct: 176 FSATNSATFNHSVSEQVYDGTGTSHMLTNYYVRTAAGWDVYSQVDGANPTGGNPVTSLTF 235

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQK--------- 151
              G    +     V+ +G        +   Q         V + G  + +         
Sbjct: 236 NSSGVLTSSPSKVAVAFAGMSIANMDFTGTTQYGGGFNDTTVSQDGYATGRLASYSVGTD 295

Query: 152 -----------GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VK 195
                         +  + + +     G      +           +  +        ++
Sbjct: 296 GTITGRYSNGRTSTLGQIAMTNFKAPDGLQNIGGNQWVETAESGAPQMGTPGMGSFGLLQ 355

Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              +E SN +   E+  MI   + + +    I   +  +   + 
Sbjct: 356 SSAVEQSNVDLSAELVNMIVAQRSYQANAQTIKTEDTILQTLVS 399


>gi|163845457|ref|YP_001623112.1| flagellar hook protein FlgE [Brucella suis ATCC 23445]
 gi|163676180|gb|ABY40290.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
          Length = 396

 Score = 79.1 bits (193), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 37/123 (30%), Positives = 59/123 (47%), Gaps = 5/123 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M      G++   A   RLSTVADN++N   VG++  + +FS +V           S V 
Sbjct: 6   MMR---TGVSGMNAQANRLSTVADNIANASMVGYKRAETQFSSLVLPSTAGQYNSGS-VL 61

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASG 119
           +   Y   + G   ST +  D A++ + +F ++ P G    TR G F    +G LV+++G
Sbjct: 62  TDVRYGISDQGGIRSTSSTTDLAIDDNGYFVVQGPGGSTYLTRAGSFVPDKNGDLVNSAG 121

Query: 120 KYP 122
            Y 
Sbjct: 122 YYL 124



 Score = 68.7 bits (166), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 22/54 (40%)

Query: 186 LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +      +  G LE+SNA+   E+  MI   + + + + +     + M   + 
Sbjct: 340 PQGDGMGKIMSGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGSELMDVLVN 393


>gi|83859391|ref|ZP_00952912.1| flagellar hook protein [Oceanicaulis alexandrii HTCC2633]
 gi|83852838|gb|EAP90691.1| flagellar hook protein [Oceanicaulis alexandrii HTCC2633]
          Length = 465

 Score = 79.1 bits (193), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 72/201 (35%), Gaps = 8/201 (3%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG-AIKNDIDQKISFVA 60
            ++   G +  +A    L+ ++DN++N +TVG++ +   F+         +     S V+
Sbjct: 4   NSAMAAGASGLIANSSALAAISDNIANVNTVGYKRVDTIFTPNYKIGGGGETRYASSGVS 63

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-------IILTRDGRFKVTDDGS 113
           S         G      +  D A++GD +F +            ++ TR G F+    G 
Sbjct: 64  SNSRLDVNSSGLLTPGVSATDMAIDGDGFFVVRPSPTAGGSSDAVLFTRSGGFQTDSSGY 123

Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRE 173
           L + +G Y           + Q     +  E   +S  G          ++ +       
Sbjct: 124 LRNDAGMYLYAWPVQADGTVNQNPSNVDTLEAVNLSNIGGTANATSSVRINANLQASTTP 183

Query: 174 NSGISPNIPPTPLEDLSGVTV 194
           ++  +   P     +++  TV
Sbjct: 184 SAAAATYDPTASGTNMASGTV 204



 Score = 69.5 bits (168), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 12/90 (13%), Positives = 33/90 (36%), Gaps = 5/90 (5%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLEDSNANSMYE 209
           +  + + +V    G      +                   +  T+    +E+SN +   E
Sbjct: 373 VYQLPVATVFNPNGLASVGGASFQITEDSGAFTLNAPGSGASGTIAAKTVENSNVDIATE 432

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              +I   + +++ + +I   ++ + EAI+
Sbjct: 433 FSNLIITQRAYSASSRIITTADEMLAEAIQ 462


>gi|242310749|ref|ZP_04809904.1| flagellar hook protein flge [Helicobacter pullorum MIT 98-5489]
 gi|239523147|gb|EEQ63013.1| flagellar hook protein flge [Helicobacter pullorum MIT 98-5489]
          Length = 764

 Score = 79.1 bits (193), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 30/149 (20%), Positives = 57/149 (38%), Gaps = 21/149 (14%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56
           M  S   G++     +  +   ++N++N +T GFR    +F  +     N ++       
Sbjct: 1   MVGSLYSGISGIKTHQVGIDVTSNNIANINTTGFRANTPEFKSLFSTNLNYVNSNSPVAN 60

Query: 57  ---SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL--------------ESPRGII 99
                V  G   ++   G+++S   + + A  G  WF +               + +   
Sbjct: 61  DYNYGVTLGSNAINTNDGTYVSADGDFNVAYSGKGWFVVGLNKNGEFDINNPNYNVKQNY 120

Query: 100 LTRDGRFKVTDDGSLVSASGKYPVLDMAS 128
            TRDG F +  +G LV++SG Y       
Sbjct: 121 FTRDGSFSLDGEGYLVNSSGYYMYGINLG 149



 Score = 64.1 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 32/105 (30%), Gaps = 18/105 (17%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL------------------SGVTV 194
           + I  +G+ +    QG  +   +    N      E                        V
Sbjct: 656 EPIGRIGIAAFVNDQGLSKVGGNLFEMNAMTINGETSVVSGPPLLAWEETGTASLKYGQV 715

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
               LE SN ++   +  +I   + +      I   ++ M EAI+
Sbjct: 716 LDHMLETSNVDTGTALTDLIVYQRGYQMSAKSITTADQLMQEAIQ 760


>gi|306518947|ref|ZP_07405294.1| flagellar basal body rod protein FlgG [Clostridium difficile
           QCD-32g58]
          Length = 182

 Score = 79.1 bits (193), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 59/129 (45%), Gaps = 9/129 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV--------GAIKNDI 52
           M T F     A  A + +L  +++N++N+D+ G++ I +++S++V             + 
Sbjct: 1   MYTMFYTSKTALSANQSKLDIISNNIANSDSTGYKKINMEYSDLVDEVLNRPSYPTNGND 60

Query: 53  DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDD 111
               +   +       E G+   T ++ + A++G+ +F +    G    TR+G F +   
Sbjct: 61  ISTGTGAKATAPMRIYEQGALAPTDSKSNLAIDGEGFFRVIRKDGTYAYTRNGGFNIDGL 120

Query: 112 GSLVSASGK 120
           G +V  +G 
Sbjct: 121 GKIVDDNGN 129


>gi|182680457|ref|YP_001834603.1| flagellar hook protein FlgE [Beijerinckia indica subsp. indica ATCC
           9039]
 gi|182636340|gb|ACB97114.1| flagellar basal body FlaE domain protein [Beijerinckia indica
           subsp. indica ATCC 9039]
          Length = 415

 Score = 79.1 bits (193), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 55/125 (44%), Gaps = 2/125 (1%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
           ++    ++   A   +LS V+DN++N++T G++    +F  +V  + N        V + 
Sbjct: 5   SALTASVSGMAAQSNKLSAVSDNIANSNTTGYKQADTEFETLVNGL-NKTSYDAGGVKTT 63

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASGKY 121
             Y     G   ST +  D  ++G+ +F +    G    TR G F    DG+L + +G  
Sbjct: 64  IRYNISSQGQLTSTSSATDLGIQGNGFFVVTDDSGTKYLTRAGSFTKNADGTLSNTAGYK 123

Query: 122 PVLDM 126
            +   
Sbjct: 124 LMGYN 128



 Score = 63.0 bits (151), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 11/68 (16%), Positives = 27/68 (39%)

Query: 172 RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
            E +G S +I           +++   LE SN +   ++  MI   + + + + + +   
Sbjct: 345 YEANGDSGSIIIGDAGTNGLGSIQSSQLESSNVDLAAQLTDMIVAQRGYEANSKVFETGS 404

Query: 232 KSMLEAIR 239
             + E + 
Sbjct: 405 TLLTELVN 412


>gi|86747891|ref|YP_484387.1| flagellar hook protein FlgE [Rhodopseudomonas palustris HaA2]
 gi|86570919|gb|ABD05476.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2]
          Length = 421

 Score = 79.1 bits (193), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 65/168 (38%), Gaps = 3/168 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           + +  ++A  A    L+ ++DN++N+ TVG++T    F  +V             V +  
Sbjct: 6   ALSSAISALNAQSSALAMISDNIANSSTVGYKTSSASFESLVTNTSGASSYSSGGVTASA 65

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALE---SPRGIILTRDGRFKVTDDGSLVSASGK 120
                  G   ST T  + A++G+ +F +    +    + TR+G F +  DG LV+    
Sbjct: 66  TSNITTQGLLTSTTTATNIAIQGNGFFPVTTSLTGGSTLYTRNGAFTIDSDGYLVNNGAY 125

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
                  +    I    E   V     +++      T   ++ ++   
Sbjct: 126 LLGWRTDTDGNVIGTASEGNLVPIDTSVAKTSSGATTTTSFAANLPAD 173



 Score = 45.2 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 13/92 (14%), Positives = 27/92 (29%), Gaps = 5/92 (5%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLEDSNANSMYE 209
           I  + + +   S     +     +                   T+    LE S  ++  +
Sbjct: 330 IYKIPVATFTASAELEAQSGGLYATTAASGSATLQESGANGAGTIYGSELESSTTDTNEQ 389

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
              MI   Q +++ + +I    K     I  I
Sbjct: 390 FSSMISAQQAYSAASQVITAVNKMFDTLIAAI 421


>gi|299068732|emb|CBJ39971.1| flagellar hook protein FlgE [Ralstonia solanacearum CMR15]
          Length = 401

 Score = 78.8 bits (192), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 4/135 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVAS 61
            F  GL+   A  + L  +  N++N +TVG++    +F +V          +Q    V  
Sbjct: 2   GFQQGLSGLDAASKNLDVIGSNVANANTVGYKKSTAEFGDVYARSLVGASDNQIGQGVDV 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPR--GIILTRDGRFKVTDDGSLVSASG 119
            K   S   G+   TG  LD A+ G  ++ +       +  TR+G+F+   +G ++SA+G
Sbjct: 62  TKVSQSFTQGNVTVTGNPLDIAINGTGFYRMVDASSGQVSYTRNGQFQTDKNGYIISATG 121

Query: 120 KYPVLDMASVPIQIP 134
           +      A    +I 
Sbjct: 122 QNLTGYAADATGKIN 136



 Score = 71.4 bits (173), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 22/224 (9%), Positives = 59/224 (26%), Gaps = 25/224 (11%)

Query: 41  FSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL 100
           FS    A  N    +  +  +G  ++         TG ++   ++G A         +  
Sbjct: 176 FSATNSATYNHSVSEQVYDGTGTSHMLTNYYVRTGTGWDVYSTVDGAAPTGGNPVTSLTF 235

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQK--------- 151
              G    +     V+ +G        +   Q        ++ + G  + +         
Sbjct: 236 NSSGALTSSPSKVAVAFTGMSIASMDFTGTTQYGGGFNDTSITQDGYATGRLASYSVGND 295

Query: 152 -----------GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VK 195
                         +  + + +     G      +           +  +        ++
Sbjct: 296 GTITGRYSNGRTSTLGQIAMTNFKAPDGLQNIGGNQWVETAESGSPQMGTPGMGSFGLLQ 355

Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              +E SN +   E+  MI   + + +    I   +  +   + 
Sbjct: 356 SSAVEQSNVDLSAELVNMIVAQRSYQANAQTIKTEDTILQTLVS 399


>gi|270487672|ref|ZP_06204746.1| fagellar hook-basal body protein [Yersinia pestis KIM D27]
 gi|270336176|gb|EFA46953.1| fagellar hook-basal body protein [Yersinia pestis KIM D27]
          Length = 193

 Score = 78.8 bits (192), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 54/173 (31%), Gaps = 8/173 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       ++       +    A+N++N++T GFR            +          V 
Sbjct: 1   MDKLLYTAVSGANRSLSQQQIHANNLANSNTQGFRADLE--KATATQVMGGGYSSRVAVL 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTD------DGSL 114
           S    +     S   TG +LD AL+     A+ S      TR+G+  V+       +G  
Sbjct: 59  SQNAGVDMTPASLQETGRDLDIALKNQGLIAVLSGGREAYTRNGQMDVSAEGALTINGLP 118

Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           V   G   VL   S                 G   QK    +   +  +  S+
Sbjct: 119 VLGDGGPIVLPPYSALSIADDGTIAIIPQRGGSKLQKRSSASNWWISPLTNSE 171


>gi|255591998|ref|XP_002535647.1| Flagellar basal-body rod protein flgG, putative [Ricinus communis]
 gi|223522413|gb|EEF26734.1| Flagellar basal-body rod protein flgG, putative [Ricinus communis]
          Length = 166

 Score = 78.8 bits (192), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 56/124 (45%), Gaps = 16/124 (12%)

Query: 12  QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV---------------GAIKNDIDQKI 56
             A +  + T+A N++N +T G++  +V FS++V                 +   + +  
Sbjct: 1   MQAQQLNVETIASNLANVNTAGYKRSRVSFSDLVALDPARRTAALAGSDAGLLAPVMRMG 60

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLV 115
           + V         + G    T   +D  ++G+ +F +++P G    TR G + V  DG+L 
Sbjct: 61  AGVGVAGISKLFDAGDIKKTDLPMDIIVQGEGFFEVQTPDGTPAYTRGGTWTVNRDGNLA 120

Query: 116 SASG 119
           +++G
Sbjct: 121 TSAG 124


>gi|11386807|sp|P57422|FLGE_BUCAI RecName: Full=Flagellar hook protein flgE
 gi|25403598|pir||E84969 flagellar hook protein flgE [imported] - Buchnera sp.  (strain APS)
 gi|10039011|dbj|BAB13045.1| flagellar hook protein flgE [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
          Length = 405

 Score = 78.8 bits (192), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 54/119 (45%), Gaps = 1/119 (0%)

Query: 7   IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66
           I ++  LA    +  +++N++N  T+G+++ K  F ++              V       
Sbjct: 2   IAISGLLANNDYMEIISNNIANASTIGYKSRKPLFFDMFSHSFYSNTTNGYGVGISSIIQ 61

Query: 67  SKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYPVL 124
           +   G  + TG +LD  +  D +F  ++S   +  TRDG+F +  D ++++  G Y   
Sbjct: 62  NFNNGMLVETGRDLDLGIIKDGFFRLVDSQGHVYYTRDGQFFLDKDQNIINIQGMYLTG 120



 Score = 66.0 bits (159), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 30/99 (30%), Gaps = 6/99 (6%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVK-RG-----FLE 200
             +QK + I  + L      +       +  S        +      ++  G      LE
Sbjct: 305 YCNQKQQTIGQILLSKFINPEKLQPESGNLWSATAESGEAKTAMKAGIQESGVLSNKTLE 364

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            SN +   E+  MI   + + S        +K +   I 
Sbjct: 365 VSNVDLNKELINMIIAQRNYQSNAQSFKTEDKIINTLIN 403


>gi|83747654|ref|ZP_00944690.1| FlgE [Ralstonia solanacearum UW551]
 gi|207728346|ref|YP_002256740.1| flagellar hook protein flge [Ralstonia solanacearum MolK2]
 gi|207739737|ref|YP_002258130.1| flagellar hook protein flge [Ralstonia solanacearum IPO1609]
 gi|83725706|gb|EAP72848.1| FlgE [Ralstonia solanacearum UW551]
 gi|206591592|emb|CAQ57204.1| flagellar hook protein flge [Ralstonia solanacearum MolK2]
 gi|206593119|emb|CAQ60025.1| flagellar hook protein flge [Ralstonia solanacearum IPO1609]
          Length = 401

 Score = 78.8 bits (192), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 4/135 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVAS 61
            F  GL+   A  + L  +  N++N +TVG++    +F +V          +Q    V  
Sbjct: 2   GFQQGLSGLDAASKNLDVIGSNVANANTVGYKKSTAEFGDVYARSLVGASDNQIGQGVDV 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPR--GIILTRDGRFKVTDDGSLVSASG 119
            K   S   G+   TG  LD A+ G  ++ +       +  TR+G+F+   +G ++SA+G
Sbjct: 62  TKVSQSFTQGNVTVTGNPLDIAINGTGFYRMVDTSSGQVSYTRNGQFQTDKNGYIISATG 121

Query: 120 KYPVLDMASVPIQIP 134
           +      A    +I 
Sbjct: 122 QNLTGYAADATGKIN 136



 Score = 73.0 bits (177), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 15/152 (9%), Positives = 44/152 (28%), Gaps = 12/152 (7%)

Query: 98  IILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQK-----G 152
           +  T      +   G+  +  G        +       +   ++VG  G I+ +      
Sbjct: 250 VAFTGMSIASMDFTGT--TQYGGGFNDTSVTQDGYATGRLASYSVGNDGTITGRYSNGRT 307

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSM 207
             +  + + +     G      +           +  +        ++   +E SN +  
Sbjct: 308 STLGQIAMTNFKAPDGLQNIGGNQWVETAESGSPQMGTPGMGSFGLLQSSAVEQSNVDLS 367

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            E+  MI   + + +    I   ++ +   + 
Sbjct: 368 AELVNMIVAQRSYQANAQTIKTEDQLLQTLVS 399


>gi|300693338|ref|YP_003749311.1| flagellar hook protein flge [Ralstonia solanacearum PSI07]
 gi|299075375|emb|CBJ34670.1| flagellar hook protein FlgE [Ralstonia solanacearum PSI07]
          Length = 401

 Score = 78.8 bits (192), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 32/135 (23%), Positives = 58/135 (42%), Gaps = 4/135 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVAS 61
            F  GL+   A  + L  +  N++N +TVG++    +F +V          +Q    V  
Sbjct: 2   GFQQGLSGLDAASKNLDVIGSNVANANTVGYKKSTAEFGDVYARSLVGASDNQIGQGVDV 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPR--GIILTRDGRFKVTDDGSLVSASG 119
            K   S   G+   TG  LD A+ G  ++ +       +  TR+G+F+   +G ++SA+G
Sbjct: 62  TKVSQSFTQGNVTVTGNPLDIAINGTGFYRMVDASSGQVSYTRNGQFQTDKNGYIISATG 121

Query: 120 KYPVLDMASVPIQIP 134
           +           +I 
Sbjct: 122 QNLTGYGVDATGKIN 136



 Score = 72.2 bits (175), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 22/224 (9%), Positives = 59/224 (26%), Gaps = 25/224 (11%)

Query: 41  FSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL 100
           FS    A  N    +  +  +G  ++        +TG ++   ++G           +  
Sbjct: 176 FSATNSATFNHSVSEQVYDGTGTSHMLTNYYVRTATGWDVYSQVDGANPTGGNPVTSLTF 235

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQK--------- 151
              G    +     V+ +G        +   Q         V + G  + +         
Sbjct: 236 NSSGTLTSSPSKVAVAFAGMSIANMDFTGTTQYGGGFNDTTVSQDGYATGRLASYSVGTD 295

Query: 152 -----------GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VK 195
                         +  + + +     G      +           +  +        ++
Sbjct: 296 GTITGRYSNGRTSTLGQIAMTNFKAPDGLQNIGGNQWVETAESGSPQMGTPGMGSFGLLQ 355

Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              +E SN +   E+  MI   + + +    I   ++ +   + 
Sbjct: 356 SSAVEQSNVDLSAELVNMIVAQRSYQANAQTIKTEDQLLQTLVS 399


>gi|188579925|ref|YP_001923370.1| flagellar hook protein FlgE [Methylobacterium populi BJ001]
 gi|179343423|gb|ACB78835.1| flagellar basal body FlaE domain protein [Methylobacterium populi
           BJ001]
          Length = 402

 Score = 78.8 bits (192), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 31/172 (18%), Positives = 64/172 (37%), Gaps = 1/172 (0%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
              G++   A   R+STVA+N+ N  T G++    +FS ++    +  +     V +   
Sbjct: 7   LRTGVSGMNAQSNRISTVAENIQNASTTGYKRTSAEFSSLLLDSGDVGNYNSGAVETTLR 66

Query: 65  YLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYPV 123
               E G   ST ++ D A++G+ +F +        +TR G F V      +  +G + +
Sbjct: 67  RSVSEGGPIASTNSDKDLAIQGNGFFVVSDAAGAPFMTRAGNFVVDGKTGNLVNAGGFTL 126

Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
           +  +                +   +S  G+        ++  +  F      
Sbjct: 127 MGYSLANGTPNPVLNGVADLKPVNVSVMGQEARPSTSATISGNLSFETPVYD 178



 Score = 66.0 bits (159), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 32/250 (12%), Positives = 66/250 (26%), Gaps = 16/250 (6%)

Query: 6   NIGLAAQLALEQRLSTVADNMS--------NTDTVGF-RTIKVKFSEVVGAIKNDIDQKI 56
           N+ +  Q A     +T++ N+S         T T+G+ +   +K  + VG       Q  
Sbjct: 150 NVSVMGQEARPSTSATISGNLSFETPVYDPATSTIGYSKKNSLKVYDNVGQPVTLDVQMT 209

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVS 116
              A+             +       A +G+          + +      KV   G    
Sbjct: 210 KTAANTWSVKFFNPADATTPVGTATVAFDGNGKVTSGGSTLVQVPNGREIKVDLGGLTQL 269

Query: 117 ASGKYPVLDMAS--VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174
           +                                     K    + L  V        R  
Sbjct: 270 SGDHALSGTADGSSPTSVSGTAFGEDGTVYAVYSDGTRKAAFKVPLADVASPDNLSPRAG 329

Query: 175 SGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           +  + +     ++           +K G LE SN +   E+  MI     + + + +   
Sbjct: 330 NVFTTSAESGDIQIGFAGAGGRGILKAGALEQSNVDVSTELTTMIESQTVYTANSKVFMT 389

Query: 230 NEKSMLEAIR 239
             + +   + 
Sbjct: 390 GNELLETLMN 399


>gi|260768782|ref|ZP_05877716.1| flagellar hook protein FlgE [Vibrio furnissii CIP 102972]
 gi|260616812|gb|EEX41997.1| flagellar hook protein FlgE [Vibrio furnissii CIP 102972]
          Length = 397

 Score = 78.8 bits (192), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 6/131 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SFNI L+   A  Q L+T+++N++N  T GF+  + +F  V      +  Q       G 
Sbjct: 2   SFNIALSGLNASNQELNTISNNIANVSTTGFKESRTEFGSVY-----NGQQAGGVQVMGI 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLVSASGKYP 122
               +  GS  +TG  LD AL G  +F ++   G +  TR G F +   G+++S +G   
Sbjct: 57  SQNFEATGSMSATGRSLDMALTGSGFFVVQDKNGQLSYTRSGVFGLDSQGNVISNTGGSL 116

Query: 123 VLDMASVPIQI 133
                     +
Sbjct: 117 QGYTVDGNNNL 127



 Score = 70.3 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 12/105 (11%), Positives = 35/105 (33%), Gaps = 5/105 (4%)

Query: 142 VGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKR 196
           +      + +  +   + L + +  Q  ++  N+  +                    +  
Sbjct: 293 MVYATYSNGQSLLQGQLVLANFNAPQELMQTSNTAWTQTYGSGQPVYGIPGSGQFGELAS 352

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           G LE SN +   E+  ++   + + + T  I   ++ M+     +
Sbjct: 353 GVLEGSNVDLTSELVHLMSAQRNYQANTKTITTADQLMMSLFNAV 397


>gi|41351258|emb|CAE47476.1| flagellar hook protein [Helicobacter hepaticus]
          Length = 693

 Score = 78.8 bits (192), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 57/165 (34%), Gaps = 15/165 (9%)

Query: 15  LEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-------------KNDIDQKISFVAS 61
            +  L   ++N++N +TVGF+  +  F +++  I               +       V  
Sbjct: 1   HQIALDVESNNIANVNTVGFKYSRASFVDMLSQIKLIATSPYKNGLGGQNDFSVGLGVGI 60

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGRFKVTDDGSLVSASG 119
                    G+  +T  + D A+EGD +F +   RG     TR+G F    +G+LV+  G
Sbjct: 61  DATTKVFSQGNTQNTDVKTDVAIEGDGFFIISPDRGTTHNYTRNGEFLFDANGNLVTTGG 120

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
                 +                  + + +   + I       + 
Sbjct: 121 YVVQGWVRPPLEAAESGTMSDFDFFRVDNTGPVRNIQIDPGMVMP 165



 Score = 64.1 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 14/120 (11%), Positives = 38/120 (31%), Gaps = 5/120 (4%)

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           +       +       +  + +          + +   +A + L +   + G      + 
Sbjct: 574 SETYSINQNGYQAGDLMDIRFDSNGSLLGAFSNGRSIALAQVALANFANNAGLQAEGGNV 633

Query: 177 ISPNIPPTPLEDLSGVTVKRG-----FLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
            S           +  T +RG      LE SN +    + Q+I + + F + +  +  ++
Sbjct: 634 YSQTGNSGEPMVGAANTGRRGGVSGSKLEMSNVDLSRSLTQLIVVQRGFQANSKAVTTSD 693


>gi|300696913|ref|YP_003747574.1| flagellar hook protein FlgE [Ralstonia solanacearum CFBP2957]
 gi|299073637|emb|CBJ53157.1| flagellar hook protein FlgE [Ralstonia solanacearum CFBP2957]
          Length = 401

 Score = 78.8 bits (192), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 4/135 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVAS 61
            F  GL+   A  + L  +  N++N +TVG++    +F +V          +Q    V  
Sbjct: 2   GFQQGLSGLDAASKNLDVIGSNVANANTVGYKKSTAEFGDVYARSLVGASDNQIGQGVDV 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPR--GIILTRDGRFKVTDDGSLVSASG 119
            K   S   G+   TG  LD A+ G  ++ +       +  TR+G+F+   +G ++SA+G
Sbjct: 62  TKVSQSFTQGNVTVTGNPLDIAINGTGFYRMVDASSGQVSYTRNGQFQTDKNGYIISATG 121

Query: 120 KYPVLDMASVPIQIP 134
           +      A    +I 
Sbjct: 122 QNLTGYAADATGKIN 136



 Score = 72.6 bits (176), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 15/152 (9%), Positives = 44/152 (28%), Gaps = 12/152 (7%)

Query: 98  IILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQK-----G 152
           +  T      +   G+  +  G        +       +   ++VG  G I+ +      
Sbjct: 250 VAFTGMSIANMDFTGT--TQYGGGFNDTSVTQDGYATGRLASYSVGNDGTITGRYSNGRT 307

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSM 207
             +  + + +     G      +           +  +        ++   +E SN +  
Sbjct: 308 STLGQIAMTNFKAPDGLQNIGGNQWVETAESGSPQMGTPGMGSFGLLQSSAVEQSNVDLS 367

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            E+  MI   + + +    I   ++ +   + 
Sbjct: 368 AELVNMIVAQRSYQANAQTIKTEDQLLQTLVS 399


>gi|237752020|ref|ZP_04582500.1| flagellar hook protein flge [Helicobacter winghamensis ATCC
           BAA-430]
 gi|229376587|gb|EEO26678.1| flagellar hook protein flge [Helicobacter winghamensis ATCC
           BAA-430]
          Length = 764

 Score = 78.8 bits (192), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 55/150 (36%), Gaps = 22/150 (14%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56
           M  SF  G++     +  + + ++N++N +T G+R    +F  +     N I+       
Sbjct: 1   MVGSFYNGISGIKTHQFGIDSTSNNIANVNTTGYRGNLPEFKSLFATNLNFINSNSPINN 60

Query: 57  ---SFVASGKEYLSKEVGSFISTGTELDFALEGDAWF---------------ALESPRGI 98
                   G   ++   G+++    + + A  G  WF                    +  
Sbjct: 61  DYNYGATIGSNAINSNDGTYVKADGDFNVAYSGKGWFVVGLDKSGEFDIKSPNYTGTQQN 120

Query: 99  ILTRDGRFKVTDDGSLVSASGKYPVLDMAS 128
             TRDG F +  +G LV++SG Y       
Sbjct: 121 FFTRDGSFSLDGEGYLVNSSGYYMYGINLG 150



 Score = 72.6 bits (176), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 22/158 (13%), Positives = 47/158 (29%), Gaps = 18/158 (11%)

Query: 100 LTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG 159
           LT+    K + + +   ++ K    D  +  I          +      + + + I   G
Sbjct: 604 LTKSEDGKTSSNFAYTDSTTKSITQDGTASGIMKDIVINKDGIILVNFTNGRTEPIGRFG 663

Query: 160 LYSVDMSQGFVRRENSGISPNIPPTPLEDL------------------SGVTVKRGFLED 201
           + +    QG  +   +    N      +                        V    LE 
Sbjct: 664 VAAFVNDQGLSKVGGNLFEMNARTINGQTSVVSGPPILAWNEDGLAGLKFGQVMDHMLET 723

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN ++   +  +I   + +      I   ++ M EAI+
Sbjct: 724 SNVDTGTALTDLIVYQRGYQMSAKSITTADQLMQEAIQ 761


>gi|149191153|ref|ZP_01869411.1| flagellar hook protein E [Vibrio shilonii AK1]
 gi|148834991|gb|EDL51970.1| flagellar hook protein E [Vibrio shilonii AK1]
          Length = 408

 Score = 78.8 bits (192), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 39/202 (19%), Positives = 75/202 (37%), Gaps = 11/202 (5%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SF+I L+   A    L+T+++N++N  T GF+  + +F+ V    +    + +    + +
Sbjct: 2   SFSIALSGLNASNSELNTISNNIANVSTTGFKESRTEFASVYSGSEAGGVEVVGVSQNFE 61

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSA----- 117
                + G+   TG  LD AL G+ +F LE  +   + TR G F +  DG + +      
Sbjct: 62  -----KSGTVTGTGRSLDMALSGNGFFVLEDSKGQTLYTRSGIFNMNADGVITANSGAAL 116

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177
            G     +   +   +          +  E      V        V  +       ++  
Sbjct: 117 QGYSVDGNNNLLLGSVGTVQISTASLQARETDSIEFVANLDAREQVPAAAFDYSDSSTYN 176

Query: 178 SPNIPPTPLEDLSGVTVKRGFL 199
                P      +  TV + F+
Sbjct: 177 HSYTTPVYDSLGNPHTVSQYFV 198



 Score = 70.3 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 18/144 (12%), Positives = 44/144 (30%), Gaps = 10/144 (6%)

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-----EISQKGKVIATMGL 160
             V  D S V+  G   V+   S             +   G       + + ++   + L
Sbjct: 263 VTVNIDLSSVTQFGSDFVVSKNSPNGYTSGDYASVRMENDGRIFATYTNGQSQLQGQVVL 322

Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIH 215
                 Q  ++  ++    +         +  +     +  G LE SN +   E+  ++ 
Sbjct: 323 ADFAAPQNLIKTSDTAWLQSFSSGTPVLGTAGSGVFGDLTSGALEGSNVDLTSELVALMT 382

Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239
             + + + T  I  +++       
Sbjct: 383 AQRNYQANTKSISTSDQLTQALFN 406


>gi|218133669|ref|ZP_03462473.1| hypothetical protein BACPEC_01538 [Bacteroides pectinophilus ATCC
           43243]
 gi|217991044|gb|EEC57050.1| hypothetical protein BACPEC_01538 [Bacteroides pectinophilus ATCC
           43243]
          Length = 420

 Score = 78.8 bits (192), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 36/99 (36%), Gaps = 6/99 (6%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE------DLSGVTVKRGFLE 200
             +    VI  +   S   + G  +   +  +  +     +        +G ++  G +E
Sbjct: 319 YSNGDTVVIGQIATQSFTNAAGLEKVGTNMYAATLNSGEFDGVGEDITSAGGSMVSGTIE 378

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            SN +   E   MI   + F + + +I  ++  + E I 
Sbjct: 379 MSNVDLASEFTDMITTQRGFQANSRIITVSDTMLEELIN 417



 Score = 55.6 bits (132), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 52/157 (33%), Gaps = 17/157 (10%)

Query: 19  LSTVADNMSNTDTVGFRT----------IKVKFSEVVGAIKNDIDQKISFVASGK----- 63
           +  + +N++N +T+ F++             + +    A      Q    +  G      
Sbjct: 1   MDVIGNNIANVNTIAFKSSSVSFSEVFYQTTQVASGPNATTGKGGQNAKQIGLGTSVGSI 60

Query: 64  EYLSKEVGSFISTGTELDFAL--EGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
                  G+   T    D  L   G+++F + S      TR G F     G+LV+ SG  
Sbjct: 61  STKVDTEGASQRTDNPFDVKLSGSGNSFFIVRSNGNTYFTRAGDFTYDASGALVTQSGAN 120

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158
            +  + +   +I +        +  E +       T 
Sbjct: 121 VMGWVTNDQGEIVKDVVQPLYVKSDEFTYTMPEQTTN 157


>gi|23015641|ref|ZP_00055411.1| COG1749: Flagellar hook protein FlgE [Magnetospirillum
           magnetotacticum MS-1]
          Length = 804

 Score = 78.8 bits (192), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 30/137 (21%), Positives = 49/137 (35%), Gaps = 8/137 (5%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +   G++   +    +  ++DN++N +T G++  KV F  +V    +        V S  
Sbjct: 6   ALFSGVSGLASQSSAMGAISDNITNVNTTGYKGAKVNFQTLVTKQVSLTSYSPGGVQSKP 65

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGI--------ILTRDGRFKVTDDGSLV 115
                  G   +T    D AL G   F + +              TR G FKV  +G L 
Sbjct: 66  RAAIDSQGLLQATTESTDLALSGQGMFVVNTDPDPATSGNGMFAYTRAGSFKVDKEGYLQ 125

Query: 116 SASGKYPVLDMASVPIQ 132
           + SG Y           
Sbjct: 126 NVSGFYVQGWPLQPTNN 142


>gi|268589982|ref|ZP_06124203.1| flagellar hook protein FlgE [Providencia rettgeri DSM 1131]
 gi|291314700|gb|EFE55153.1| flagellar hook protein FlgE [Providencia rettgeri DSM 1131]
          Length = 419

 Score = 78.8 bits (192), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 17/98 (17%), Positives = 38/98 (38%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISP-NIPPTPLE----DLSGVTVKRGFLED 201
             +Q+ +V+  + L +     G V +  +  +  N    P++          +  G LE 
Sbjct: 320 YSNQQKRVVGQVALSAFANPNGLVSQGGNVWASSNTSGNPMDGVPGVGQFGKLTSGALES 379

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E+  MI + + + S    I   ++ +   + 
Sbjct: 380 SNVDMSQELISMIVMQRNYQSNAQTIKTQDQMLQTLVN 417



 Score = 76.8 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 52/129 (40%), Gaps = 6/129 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SF+  ++   A    L ++ +N++N+ T GF+     F+++       +      V    
Sbjct: 2   SFSQAVSGLNAASAGLDSIGNNIANSATNGFKGATTSFADMFAGSGVGL-----GVNVAA 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
              + + G    T    D A+ G+ +F   +       +RDG+F     G+LV+  G   
Sbjct: 57  VTQNFKDGPITRTDRATDVAISGNGFFRVQDQNGDTYYSRDGQFLRDKSGNLVNNQGMVV 116

Query: 123 VLDMASVPI 131
               ASV  
Sbjct: 117 TGYPASVDE 125


>gi|59712481|ref|YP_205257.1| flagellar hook protein FlgE [Vibrio fischeri ES114]
 gi|197335363|ref|YP_002156700.1| flagellar hook protein [Vibrio fischeri MJ11]
 gi|24459277|gb|AAL86630.1| FlgE [Vibrio fischeri ES114]
 gi|59480582|gb|AAW86369.1| flagellar hook protein FlgE [Vibrio fischeri ES114]
 gi|197316853|gb|ACH66300.1| flagellar hook protein [Vibrio fischeri MJ11]
          Length = 432

 Score = 78.8 bits (192), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 64/168 (38%), Gaps = 6/168 (3%)

Query: 6   NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGK 63
            + L+   A ++ L+T ++N++N +T GF+  + +F +V  +    N          + K
Sbjct: 3   YVALSGLAAAQKDLNTTSNNLANANTYGFKESRAEFGDVYSSSLFSNAKTTTGGGAQTTK 62

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWF----ALESPRGIILTRDGRFKVTDDGSLVSASG 119
                  GS I T   +D  + G  +F        P    L+R+G F + ++  + +++ 
Sbjct: 63  VAQQFHEGSSIYTNNPMDLRISGQGFFAVAKDRLQPATNELSRNGAFHLDNENYVTTSND 122

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           ++ +              E   +    +  +           ++  ++
Sbjct: 123 EFLLGYEVDPESGNVSSYEPKALKIPDQFGKPKPTENVEIGMNLPATE 170



 Score = 67.6 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/198 (12%), Positives = 57/198 (28%), Gaps = 9/198 (4%)

Query: 48  IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107
              D       +     + +      I+ G  +     G+    L        ++    K
Sbjct: 236 NGGDSTNAAGQIGHSIIFNNDGTTQSINAGQPVATTTLGENGLNLNGADP---SQTLTMK 292

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-IATMGLYSVDMS 166
             +     +        +  +    + + D   +    G  S    V +  + +  V   
Sbjct: 293 FDNPTQFSAPFEMRRFSEDGATTGYLSKVDIDKSGNIVGSYSNGKDVTLGRVAMVRVTNQ 352

Query: 167 QGFVRRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221
           QG  +   +  S                S   ++ G LE SN +   E+  +I   + F 
Sbjct: 353 QGLAQNGGTQWSTTQASGAAIWGEANQGSFGDIQSGTLEQSNIDMTQELVDLISAQRNFQ 412

Query: 222 SITTLIDENEKSMLEAIR 239
           + +  +D + +     ++
Sbjct: 413 ANSRSLDVHNQLQQNILQ 430


>gi|639926|gb|AAA61738.1| flagellar hook polypeptide [Borrelia burgdorferi]
          Length = 190

 Score = 78.8 bits (192), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 49/122 (40%), Gaps = 12/122 (9%)

Query: 18  RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------------QKISFVASGKEY 65
           R+  V +N++N +T+GF+  +V F +++    +               Q    +      
Sbjct: 1   RMDVVGNNIANVNTIGFKKGRVNFQDMISQSISGASRPTDARGGTNPKQVGLGMNVASID 60

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125
                G+F ST    D  + G+ +F L+  + +  TR G F V  D  LV+ +    +  
Sbjct: 61  TIHTQGAFQSTQKASDLGVSGNGFFILKEGKNLFYTRAGAFDVDSDRHLVNPANGMRIQG 120

Query: 126 MA 127
             
Sbjct: 121 WM 122


>gi|33592479|ref|NP_880123.1| flagellar hook protein FlgE [Bordetella pertussis Tohama I]
 gi|33572125|emb|CAE41667.1| flagellar hook protein FlgE [Bordetella pertussis Tohama I]
 gi|332381896|gb|AEE66743.1| flagellar hook protein FlgE [Bordetella pertussis CS]
          Length = 473

 Score = 78.8 bits (192), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 66/189 (34%), Gaps = 14/189 (7%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
            F  GL+   A  Q L  + +N++N+ TVGF++    F++V  +      +    V    
Sbjct: 2   GFGQGLSGLNAASQNLDVIGNNIANSGTVGFKSGAASFADVYAS-----SRVGLGVKVSA 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRG--IILTRDGRFKVTDDGSLVSASGKY 121
                 VG+  +TG E D A++G   F   + +   +  +R+G F V  +  +V+A G  
Sbjct: 57  INQRFTVGNISTTGGEYDMAIDGGKGFFRLTDQSGGVFYSRNGEFMVDKNFYIVNAQGFR 116

Query: 122 PVLDMASVPIQIPQKDEIFNVG-------EKGEISQKGKVIATMGLYSVDMSQGFVRREN 174
                A      P   ++             G  +        +         G V  + 
Sbjct: 117 LTGYPAGGVGAQPVDLQLPQGNIAPQATSTAGLQTNLNANAKVIDPNDTPPEDGLVELDG 176

Query: 175 SGISPNIPP 183
           +        
Sbjct: 177 TTYRFTNAG 185



 Score = 75.3 bits (183), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 32/98 (32%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLED 201
             + + + I T+ L + +  QG     N+                 T     +    LE 
Sbjct: 374 YTNGETQTIGTLVLANFNNVQGLQPVGNNAWVETSESGQATLGQPGTNGLATIAGQALEA 433

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E+  MI   + + +    I   ++ M   + 
Sbjct: 434 SNVDMSRELVNMIVAQRTYQANAQTIKTQDEVMQVLMN 471


>gi|28952050|ref|NP_240159.2| flagellar hook protein FlgE [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219681699|ref|YP_002468085.1| flagellar hook protein FlgE [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|257471395|ref|ZP_05635394.1| flagellar hook protein FlgE [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|219624542|gb|ACL30697.1| flagellar hook protein FlgE [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|311086078|gb|ADP66160.1| flagellar hook protein FlgE [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
 gi|311086649|gb|ADP66730.1| flagellar hook protein FlgE [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
 gi|311087235|gb|ADP67315.1| flagellar hook protein FlgE [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
 gi|311087754|gb|ADP67833.1| flagellar hook protein FlgE [Buchnera aphidicola str. JF98
           (Acyrthosiphon pisum)]
          Length = 408

 Score = 78.8 bits (192), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 54/125 (43%), Gaps = 3/125 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       ++  LA    +  +++N++N  T+G+++ K  F ++              V 
Sbjct: 1   MSNMI--AISGLLANNDYMEIISNNIANASTIGYKSRKPLFFDMFSHSFYSNTTNGYGVG 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119
                 +   G  + TG +LD  +  D +F  ++S   +  TRDG+F +  D ++++  G
Sbjct: 59  ISSIIQNFNNGMLVETGRDLDLGIIKDGFFRLVDSQGHVYYTRDGQFFLDKDQNIINIQG 118

Query: 120 KYPVL 124
            Y   
Sbjct: 119 MYLTG 123



 Score = 65.7 bits (158), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 30/99 (30%), Gaps = 6/99 (6%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVK-RG-----FLE 200
             +QK + I  + L      +       +  S        +      ++  G      LE
Sbjct: 308 YCNQKQQTIGQILLSKFINPEKLQPESGNLWSATAESGEAKTAMKAGIQESGVLSNKTLE 367

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            SN +   E+  MI   + + S        +K +   I 
Sbjct: 368 VSNVDLNKELINMIIAQRNYQSNAQSFKTEDKIINTLIN 406


>gi|300311352|ref|YP_003775444.1| flagellar basal-body rod protein FlgE [Herbaspirillum seropedicae
           SmR1]
 gi|300074137|gb|ADJ63536.1| flagellar basal-body rod FlgE protein [Herbaspirillum seropedicae
           SmR1]
          Length = 432

 Score = 78.8 bits (192), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 53/119 (44%), Gaps = 5/119 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID--QKISFVAS 61
            F  GL+      + L  + +N++N  TVGF+  + +F+++     N          V+ 
Sbjct: 2   GFQQGLSGLNGAAKSLDVIGNNVANASTVGFKQSQAQFADMYANSMNRSGNSPVGIGVSV 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALE---SPRGIILTRDGRFKVTDDGSLVSA 117
                    G+  S+   LD A+ GD +F L    + +  +  R+G+F++   G +V+ 
Sbjct: 62  PAVAQQFTQGNISSSNNPLDIAINGDGFFQLSASLTNKSPMYGRNGQFQLDKSGYIVNP 120



 Score = 64.5 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 17/98 (17%), Positives = 33/98 (33%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFL-----ED 201
             +Q+ K + T+ L +     G     N+    +            T   G L     ED
Sbjct: 333 YSNQQTKNLGTVVLVNFANPNGLQPLGNNLYQASSAAGSPLVGKPTTGTFGTLQARAKED 392

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E+  MI   + + + +  I   +  +   + 
Sbjct: 393 SNVDLTAELVNMIVAQRVYQANSQTIKVQDTVLQTLVS 430


>gi|163856435|ref|YP_001630733.1| hypothetical protein Bpet2124 [Bordetella petrii DSM 12804]
 gi|163260163|emb|CAP42465.1| flgE [Bordetella petrii]
          Length = 413

 Score = 78.8 bits (192), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 18/140 (12%), Positives = 37/140 (26%), Gaps = 5/140 (3%)

Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
                      S        +  S               +    + +  +I T+ L + +
Sbjct: 272 TMSYDGVTQYGSDFSPKITQNGYSSGEYSGLSINSDGTLQANYTNGETAIIGTLALANFN 331

Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQK 219
             QG     N+  +              T     V    +E SN +   E+  MI   + 
Sbjct: 332 NVQGLQPVGNNAWAETGASGQPTLGQPGTNGLATVVGQAVEASNVDMSKELVNMIVAQRT 391

Query: 220 FNSITTLIDENEKSMLEAIR 239
           + +    I   ++ M   + 
Sbjct: 392 YQANAQTIKTQDEVMQVLMN 411



 Score = 77.6 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/128 (26%), Positives = 54/128 (42%), Gaps = 7/128 (5%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
            F  GL+   A  Q L  + +N++N+ TVGF++    F++V  +      +    V    
Sbjct: 2   GFGQGLSGLNAAAQNLDVIGNNIANSGTVGFKSATASFADVYASS-----RVGLGVKVSA 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRG--IILTRDGRFKVTDDGSLVSASGKY 121
                 VG+   TG E D A++G   F   +     +  +R+G F V  D  LV+A G  
Sbjct: 57  INQRFSVGNVTVTGGEYDIAIDGPKGFFRLTDPSGGVFYSRNGEFLVDKDFYLVNAQGYR 116

Query: 122 PVLDMASV 129
                A  
Sbjct: 117 LTGYAAGA 124


>gi|292489133|ref|YP_003532020.1| flagellar hook protein FlgE [Erwinia amylovora CFBP1430]
 gi|292900252|ref|YP_003539621.1| flagellar hook protein [Erwinia amylovora ATCC 49946]
 gi|291200100|emb|CBJ47226.1| flagellar hook protein [Erwinia amylovora ATCC 49946]
 gi|291554567|emb|CBA22181.1| Flagellar hook protein flgE [Erwinia amylovora CFBP1430]
 gi|312173291|emb|CBX81546.1| Flagellar hook protein flgE [Erwinia amylovora ATCC BAA-2158]
          Length = 410

 Score = 78.8 bits (192), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 18/124 (14%), Positives = 40/124 (32%), Gaps = 5/124 (4%)

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
               D  +    +  +            + + ++IA + L +     G  +  N+    +
Sbjct: 285 PVKTDGHAAGNYVNFQIGDNGEITANYDNGEKQLIAQVVLANFANPGGLQQNGNNTWVES 344

Query: 181 IPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
                         S  ++  G LE+SN +   EM  MI   + + S +  I    + + 
Sbjct: 345 PQSGGSIIGTAGSGSFGSLTGGALENSNVDLGSEMVNMIVYQRNYQSNSQTIKTQSEMLQ 404

Query: 236 EAIR 239
             + 
Sbjct: 405 TLVN 408



 Score = 72.2 bits (175), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 62/158 (39%), Gaps = 7/158 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SF+ GL+   A    L  V +N++N+ T GF++  + F+++          +   V    
Sbjct: 2   SFSQGLSGLNAAASALDVVGNNIANSQTFGFKSGSIGFADIFA------GAQGMGVQVAG 55

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGKYP 122
              + + G    TG  LD  + G+ +F L    G    +R+G+F    +G + + +    
Sbjct: 56  SGQNFKDGGLTGTGRNLDMGINGNGFFRLMDEAGQAYYSRNGQFDTDVNGYITNLTNGLR 115

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           +    +       +        + + +    V +T G 
Sbjct: 116 LTGYQATGTPPAIQAGAAVAPIQIDKTGMPPVASTSGK 153


>gi|262364764|gb|ACY61321.1| flagellar hook protein [Yersinia pestis D182038]
          Length = 288

 Score = 78.8 bits (192), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 36/132 (27%), Positives = 57/132 (43%), Gaps = 6/132 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SF+I   A  A  ++L+T+++N++N+ T GF+  + +FS +         Q +    SG 
Sbjct: 2   SFSIANTALNAHTEQLNTISNNIANSATKGFKASRTEFSSMYAQS-----QPLGVAVSGV 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122
                + G    TG  LD A+ G  +F +         TR G F+   DG LV+  G   
Sbjct: 57  SQNISKDGQKEKTGMGLDLAISGGGFFVVRESSGDKAYTRAGMFRSDVDGYLVNGQGMKL 116

Query: 123 VLDMASVPIQIP 134
               A     I 
Sbjct: 117 QGYPADAAGNIQ 128


>gi|317047691|ref|YP_004115339.1| flagellar hook-basal body protein [Pantoea sp. At-9b]
 gi|316949308|gb|ADU68783.1| flagellar hook-basal body protein [Pantoea sp. At-9b]
          Length = 406

 Score = 78.8 bits (192), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 16/142 (11%), Positives = 43/142 (30%), Gaps = 5/142 (3%)

Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162
               + +   +  + +   P  D  +                    +Q+ +++  + L S
Sbjct: 263 TLNMQGSLQQNTGTTTFGNPTQDGYAPGDLTTYTINDDGTITGTYSNQQTQLLGQIVLAS 322

Query: 163 VDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217
               +G     ++  S                +  ++  G LE SN +   E+  MI   
Sbjct: 323 FSNPEGLQSEGDNVWSATSSSGQAAIGTAGTGTFGSLTAGALEASNVDLSQELVNMIVAQ 382

Query: 218 QKFNSITTLIDENEKSMLEAIR 239
           + + +    I   ++ +   + 
Sbjct: 383 RNYQANAQTIKTQDQILNTLVN 404



 Score = 76.1 bits (185), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 75/195 (38%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SF+  ++   A    L  + +N++N+ T GF++  + F+++       +  K++ V    
Sbjct: 2   SFSQAVSGLSAASSNLDVIGNNIANSATAGFKSSTIAFADLFAGSDVGLGTKVAAV---- 57

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122
              +   G+  +T   LD AL G+ +F +      +  +R+G+F + ++ +LV+  G Y 
Sbjct: 58  -IQNFNDGTTTTTSRGLDVALSGNGFFRMTDSSGAVYYSRNGQFTLDENRNLVNTQGLYV 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               AS      Q                 K   T    +   S   +    +  S N+ 
Sbjct: 117 TGYPASGSPATIQTGANPVALSIPTTQMSAKATTTATQVANLNSTSDIPSVTTFDSSNVD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 177 SYNAKSTMTVYDSQG 191


>gi|315180485|gb|ADT87399.1| flagellar hook protein E [Vibrio furnissii NCTC 11218]
          Length = 397

 Score = 78.8 bits (192), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 44/189 (23%), Positives = 73/189 (38%), Gaps = 13/189 (6%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SFNI L+   A  Q L+T+++N++N  T GF+  + +F  V      +  Q       G 
Sbjct: 2   SFNIALSGLNASNQELNTISNNIANVSTTGFKESRTEFGSVY-----NGQQAGGVQVMGI 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLVSASGKYP 122
               +  GS  +TG  LD AL G  +F ++   G +  TR G F +   G+++S +G   
Sbjct: 57  SQNFEATGSMSATGRSLDMALTGSGFFVVQDKNGQLSYTRSGVFGLDSQGNVISNTGGSL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
                     +         G  G +      +       VD +     R ++  +   P
Sbjct: 117 QGYTVDGNNNLL-------AGSMGPLKVDMSSLEAKATNKVDFAANLDDRVDAIDTTENP 169

Query: 183 PTPLEDLSG 191
             P    S 
Sbjct: 170 FDPKNVDSY 178



 Score = 70.3 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 12/105 (11%), Positives = 35/105 (33%), Gaps = 5/105 (4%)

Query: 142 VGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKR 196
           +      + +  +   + L + +  Q  ++  N+  +                    +  
Sbjct: 293 MVYATYSNGQSLLQGQLVLANFNAPQELMQTSNTAWTQTYGSGQPVYGIPGSGQFGELAS 352

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           G LE SN +   E+  ++   + + + T  I   ++ M+     +
Sbjct: 353 GVLEGSNVDLTSELVHLMSAQRNYQANTKTITTADQLMMSLFNAV 397


>gi|259907634|ref|YP_002647990.1| Flagellar hook protein FlgE [Erwinia pyrifoliae Ep1/96]
 gi|224963256|emb|CAX54740.1| Flagellar hook protein FlgE [Erwinia pyrifoliae Ep1/96]
 gi|283477476|emb|CAY73392.1| flgE [Erwinia pyrifoliae DSM 12163]
          Length = 410

 Score = 78.4 bits (191), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 18/124 (14%), Positives = 40/124 (32%), Gaps = 5/124 (4%)

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
               D  +    +  +            + + ++IA + L +     G  +  N+    +
Sbjct: 285 PVKTDGHAAGNYVNFQIGDNGEITANYDNGEKQLIAQVVLANFANPGGLQQNGNNTWVES 344

Query: 181 IPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
                         S  ++  G LE+SN +   EM  MI   + + S +  I    + + 
Sbjct: 345 PQSGGSIIGTAGTGSFGSLTGGALENSNVDLGSEMVNMIVYQRNYQSNSQTIKTQSEMLQ 404

Query: 236 EAIR 239
             + 
Sbjct: 405 TLVN 408



 Score = 73.0 bits (177), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 61/158 (38%), Gaps = 7/158 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SF+ GL+   A    L  V +N++N+ T GF+   + F+++          +   V    
Sbjct: 2   SFSQGLSGLNAAASALDVVGNNIANSQTFGFKAGSIGFADIFA------GAQGMGVQVAG 55

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGKYP 122
              + + G    TG  +D  + G+ +F L    G    +R+G+F    +G + + +    
Sbjct: 56  SSQNFKDGGLTGTGRNMDMGINGNGFFRLMDEAGQAYYSRNGQFDTDVNGYITNLTNGLR 115

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           +    +       +        + + +    V +T G 
Sbjct: 116 LTGYQATGTPPAIQAGAAVAPIQIDKTGMPPVASTSGK 153


>gi|224436455|ref|ZP_03657469.1| flagellar hook protein FlgE [Helicobacter cinaedi CCUG 18818]
 gi|313142967|ref|ZP_07805160.1| flagellar hook protein FlgE [Helicobacter cinaedi CCUG 18818]
 gi|313127998|gb|EFR45615.1| flagellar hook protein FlgE [Helicobacter cinaedi CCUG 18818]
          Length = 745

 Score = 78.4 bits (191), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 55/150 (36%), Gaps = 22/150 (14%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-------D 53
           M ++     +     +  L ++++N++N +T+G+R    +F  +     + +       +
Sbjct: 1   MNSTLINSYSGIKTHQFGLDSISNNIANVNTIGYRRNIPQFESLFSTNMDSLNADSPINN 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA---------------LESPRGI 98
                       +S   GS+ ++  E + A EG  WF                 E  +  
Sbjct: 61  DMNYGATKSSNAISTRSGSYKASDGEFNVAYEGKGWFVVGEQKSGSFEIKDDGYEKKQKN 120

Query: 99  ILTRDGRFKVTDDGSLVSASGKYPVLDMAS 128
             TRDG F    +G +V+ SG Y       
Sbjct: 121 YFTRDGSFLRDGEGYIVNTSGYYMYGVDLG 150



 Score = 66.0 bits (159), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 38/102 (37%), Gaps = 15/102 (14%)

Query: 153 KVIATMGLYSVDMSQGFVRRENS----------GISPNIPPTPLEDLSGVTVKRGF---- 198
           + +  +G+ +    QG  +   +          G +  I   P+    G+ +K G     
Sbjct: 641 EPMGRVGIAAFVNDQGLRKVGGNLFEMTEMVVNGDASTISGKPILGWEGLNLKFGSVLYK 700

Query: 199 -LEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            LE SN +    + ++I + + ++         +  + EA+ 
Sbjct: 701 HLETSNVDVGNALTELIVMQRGYSMNAKAFTTGDDLVKEALN 742


>gi|148256818|ref|YP_001241403.1| putative flagellar hook protein flgE [Bradyrhizobium sp. BTAi1]
 gi|146408991|gb|ABQ37497.1| putative Flagellar hook protein flgE [Bradyrhizobium sp. BTAi1]
          Length = 601

 Score = 78.4 bits (191), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 56/139 (40%), Gaps = 11/139 (7%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           + N  ++   A    L  ++ N++N  TVG++ I   F +++    N   Q    V +  
Sbjct: 6   AMNTSVSGLSAQSFALQNISGNIANASTVGYKGIGTSFEDLIPNATNPTRQNAGGVTAFA 65

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRG-----------IILTRDGRFKVTDDG 112
           +      G+  ++    + A+ GD +F ++                  TR G F++  +G
Sbjct: 66  KATITTQGTVSTSSVATNMAINGDGFFNVQKASSVVDNVPVFTGVTNYTRRGDFQLNANG 125

Query: 113 SLVSASGKYPVLDMASVPI 131
           +L++ +G Y +        
Sbjct: 126 NLINGAGYYLMGVAVDPKT 144



 Score = 69.1 bits (167), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 12/92 (13%), Positives = 31/92 (33%)

Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEM 210
           +   +A + L   + +      +                +   +  G LE SN +   E 
Sbjct: 510 QTINLAQVTLSHFNGTNYLKALDGGAYEATDQSGQAIIGASGKISGGSLEGSNTDIADEF 569

Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            ++I   Q +++ T +I      + + +  + 
Sbjct: 570 TKLIVTQQAYSANTKVITTANSMVQDLLNVLR 601


>gi|219682254|ref|YP_002468638.1| flagellar hook protein FlgE [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|219621987|gb|ACL30143.1| flagellar hook protein FlgE [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
          Length = 408

 Score = 78.4 bits (191), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 54/125 (43%), Gaps = 3/125 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       ++  LA    +  +++N++N  T+G+++ K  F ++              V 
Sbjct: 1   MSNMI--AISGLLANNDYMEIISNNIANASTIGYKSRKPLFFDMFSHSFYSNTTNGYGVG 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119
                 +   G  + TG +LD  +  D +F  ++S   +  TRDG+F +  D ++++  G
Sbjct: 59  ISSIIQNFNNGMLVETGRDLDLGIIKDGFFRLVDSQGHVYYTRDGQFFLDKDQNIINIQG 118

Query: 120 KYPVL 124
            Y   
Sbjct: 119 MYLTG 123



 Score = 65.7 bits (158), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 15/99 (15%), Positives = 29/99 (29%), Gaps = 6/99 (6%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVK------RGFLE 200
             +QK + I  + L      +       +  S        +      ++         LE
Sbjct: 308 YCNQKQQTIGQILLSKFINPEKLQPESGNLWSATAESGEAKTAMKAGIQESGVLSNKTLE 367

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            SN +   E+  MI   + + S        +K +   I 
Sbjct: 368 VSNVDLNKELINMIIAQRNYQSNAQSFKTEDKIINTLIN 406


>gi|296123915|ref|YP_003631693.1| flagellar basal body FlaE domain protein [Planctomyces limnophilus
           DSM 3776]
 gi|296016255|gb|ADG69494.1| flagellar basal body FlaE domain protein [Planctomyces limnophilus
           DSM 3776]
          Length = 562

 Score = 78.4 bits (191), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 56/157 (35%), Gaps = 12/157 (7%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------KN 50
           ++ N  L      E  +  + +N++N  T GF+   V+F   +                +
Sbjct: 5   SALNTSLNGLSLNEVTIDVLGNNIANAGTNGFKASTVRFQTQLARTLSIGSRPTATDGGS 64

Query: 51  DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTD 110
           +  Q      +         GS  ++ +  D A++G+ +F ++   G   TR+G F  + 
Sbjct: 65  NPRQVGLGATTSAISKDFTQGSLSNSTSASDLAIQGEGFFVMDGSSGRTYTRNGNFLRSS 124

Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGE 147
           D  LV+  G++           I            GE
Sbjct: 125 DSYLVNDQGQFVQGYGIDDEFNIVTTQLSPLRIPLGE 161



 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/205 (12%), Positives = 60/205 (29%), Gaps = 12/205 (5%)

Query: 39  VKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98
             F   + + ++                  ++    +    L+     D          +
Sbjct: 361 TTFRYFLESAQDSRPGVAIGTGLITFDSDGKITGDTTQMFTLE---RSDTAAVSPMQIEM 417

Query: 99  ILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158
            L++         GS ++ S +            I ++  I  + + G I   G+V+   
Sbjct: 418 DLSQISGISSAQSGSALNLSNQNGSKPGTLQSYVIDEQGLINGIFDNGLIRSLGQVV--- 474

Query: 159 GLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQM 213
            L     S G +    +     +     + +S       T+  G +E SN +    +  +
Sbjct: 475 -LARFANSDGLLEAGGTAFREGVSSGVPQIVSPGSFGAGTIASGKIELSNTDIGRNLVDL 533

Query: 214 IHLTQKFNSITTLIDENEKSMLEAI 238
           I  +  +     +I   +    E +
Sbjct: 534 IVASTNYRGNARVISSVQDLTNELL 558


>gi|315497293|ref|YP_004086097.1| fagellar hook-basal body protein [Asticcacaulis excentricus CB 48]
 gi|315415305|gb|ADU11946.1| fagellar hook-basal body protein [Asticcacaulis excentricus CB 48]
          Length = 459

 Score = 78.4 bits (191), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 35/167 (20%), Positives = 69/167 (41%), Gaps = 5/167 (2%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
           ++   G++A  A    L+ +++N++N +T  ++++   F+  V +  +         AS 
Sbjct: 5   SAMLSGVSALSANSTALAAISNNIANVNTTAYKSVSTSFAANVSSSGSSTYSSGGVSAST 64

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALESPRG----IILTRDGRFKVTDDGSLVSAS 118
                 E G+  +T + LD A++G  +F +            TRDG F V D+G LV++S
Sbjct: 65  ALS-ITEAGALQTTTSSLDLAIDGSGFFVVSEGADGSGGSYYTRDGSFSVNDEGYLVNSS 123

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           G Y     A     +     + ++      +      AT  +     
Sbjct: 124 GYYLQGWQADSSGNVTAASSVSDLSAIKIPTSSDTPTATTSISLAAN 170



 Score = 68.7 bits (166), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 11/97 (11%), Positives = 34/97 (35%), Gaps = 5/97 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLED 201
                 +V+A + + +   + G   +  +  + +                  +    LE 
Sbjct: 359 YEDGTSRVLAQIPVATFVNANGLTAKSGNVYALSSESGSYTLRTPGSGGAGLLASSSLEA 418

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  +   E   +I + + +++ + +I  +++ M   I
Sbjct: 419 STVDLSSEFTSLITIQRAYSAASKIITTSDEMMQTVI 455


>gi|310764860|gb|ADP09810.1| Flagellar hook protein FlgE [Erwinia sp. Ejp617]
          Length = 410

 Score = 78.4 bits (191), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 18/124 (14%), Positives = 40/124 (32%), Gaps = 5/124 (4%)

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
               D  +    +  +            + + ++IA + L +     G  +  N+    +
Sbjct: 285 PVKTDGHAAGNYVNFQIGDNGEITANYDNGEKQLIAQVVLANFANPGGLQQNGNNTWVES 344

Query: 181 IPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
                         S  ++  G LE+SN +   EM  MI   + + S +  I    + + 
Sbjct: 345 PQSGGSIIGMAGTGSFGSLTGGALENSNVDLGSEMVNMIVYQRNYQSNSQTIKTQSEMLQ 404

Query: 236 EAIR 239
             + 
Sbjct: 405 TLVN 408



 Score = 72.6 bits (176), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 61/158 (38%), Gaps = 7/158 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SF+ GL+   A    L  V +N++N+ T GF+   + F+++          +   V    
Sbjct: 2   SFSQGLSGLNAAASALDVVGNNIANSQTFGFKAGSIGFADIFA------GAQGMGVQVAG 55

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGKYP 122
              + + G    TG  +D  + G+ +F L    G    +R+G+F    +G + + +    
Sbjct: 56  SSQNFKDGGLTGTGRNMDMGINGNGFFRLMDEAGQAYYSRNGQFDTDVNGYITNLTNGLR 115

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           +    +       +        + + +    V +T G 
Sbjct: 116 LTGYQATGTPPAIQAGAAVAPIQIDKTGMPPVASTSGK 153


>gi|307719963|ref|YP_003891103.1| flagellar hook-basal body protein [Sulfurimonas autotrophica DSM
           16294]
 gi|306978056|gb|ADN08091.1| flagellar hook-basal body protein [Sulfurimonas autotrophica DSM
           16294]
          Length = 420

 Score = 78.4 bits (191), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 7/136 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN-------DID 53
           M  +F  G++        +  V+DNM+N DT+GFR    +FS +   + +          
Sbjct: 2   MTQAFYTGISGIKTNSTGIDIVSDNMANIDTIGFRGNDYEFSSLFENMLSTDTLGTPSNS 61

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113
                       + ++ GSF+ +    D AL  D WF ++     + TRDG F    D  
Sbjct: 62  SIGVGSQLQASPMVQQKGSFMISDKSTDLALFEDGWFGIKGNGNTLYTRDGNFTFDKDDD 121

Query: 114 LVSASGKYPVLDMASV 129
           LV+  G + +  M + 
Sbjct: 122 LVTQDGFHVLGTMGNN 137



 Score = 59.5 bits (142), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 18/93 (19%), Positives = 38/93 (40%), Gaps = 8/93 (8%)

Query: 155 IATMGLYSVDMSQGFVR--------RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANS 206
           +  + +Y     QG  R          NSG +        E++ G  +    LE SN   
Sbjct: 325 VGKIAVYHFQNDQGLNRISGTRFQESTNSGKALFFKDEKGENIIGTNMANFKLEGSNIEM 384

Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            Y + ++I L + +++ +  +   ++ M +A+ 
Sbjct: 385 SYGLTELIILQRAYDANSKSVTTADQMMQKALN 417


>gi|220922287|ref|YP_002497589.1| flagellar basal body FlaE domain-containing protein
           [Methylobacterium nodulans ORS 2060]
 gi|219946894|gb|ACL57286.1| flagellar basal body FlaE domain protein [Methylobacterium nodulans
           ORS 2060]
          Length = 456

 Score = 78.4 bits (191), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 35/142 (24%), Positives = 57/142 (40%), Gaps = 14/142 (9%)

Query: 1   MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
           M   ++    ++   A    L  ++ N++N  T G+R I   F +++           S 
Sbjct: 1   MDVFSALQTAVSGLKAQAFSLDNISGNIANAQTTGYRRIDTTFVDLLAEQPVKSQTSGS- 59

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP-----------RGIILTRDGRFK 107
           VA+  +  +   G+  STG   + AL GD +F +  P              + TR G F 
Sbjct: 60  VAAYSQLTNTLQGNLTSTGIGTNMALNGDGFFVVRIPGTDTAGQRSFSSENLYTRRGDFT 119

Query: 108 VTDDGSLVSASGKYPVLDMASV 129
           V  DG LV+ +G Y V      
Sbjct: 120 VDKDGFLVNGAGSYLVGQSLDP 141



 Score = 70.3 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/201 (13%), Positives = 61/201 (30%), Gaps = 4/201 (1%)

Query: 44  VVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103
           +  A +N      S   +     +      ++  T    A+              + T  
Sbjct: 258 LFYAAQNGTTSASSTWKNVGTAFTFNASGQLTAPTGGTLAIPNVTVDGTSLGTLTLDTGS 317

Query: 104 GRF-KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162
           G   +       V+ +        +     +    +    G     +     +A +G+  
Sbjct: 318 GGLTQYGAANGQVTTNTLQQNGYASGTLTALAVTSDGKITGTY--SNGNDLALAQVGVVR 375

Query: 163 VDMSQGFVRRENSGISPNIP-PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221
            +             +       PL  L G TV  G +E SN ++  E  ++I   Q ++
Sbjct: 376 FNAPDALRAESLGNYARTADSGEPLIGLKGATVVGGNVEQSNTDTANEFSKLIITQQAYS 435

Query: 222 SITTLIDENEKSMLEAIRNIA 242
           + T ++   ++ M + I  I 
Sbjct: 436 ANTRVMSTAQQMMTDLINIIR 456


>gi|209695762|ref|YP_002263692.1| flagellar hook protein FlgE [Aliivibrio salmonicida LFI1238]
 gi|208009715|emb|CAQ80019.1| flagellar hook protein FlgE [Aliivibrio salmonicida LFI1238]
          Length = 432

 Score = 78.4 bits (191), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 63/168 (37%), Gaps = 6/168 (3%)

Query: 6   NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGK 63
            + L+   A ++ L+T ++N++N +T GF+  + +F +V  +    N          + K
Sbjct: 3   YVALSGLSAAQKDLNTTSNNLANANTFGFKESRAEFGDVYSSSLFSNTKTTTGGGAQTTK 62

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWF----ALESPRGIILTRDGRFKVTDDGSLVSASG 119
                  GS I T   +D  + G  +F        P    L+R+G F +  +  + +++ 
Sbjct: 63  IAQQFHEGSSIYTNNPMDLRISGQGFFGVAKDRLQPGTNELSRNGAFHLDKENYVTTSND 122

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           ++ +              +   +    +  +           ++  S+
Sbjct: 123 EFLLGYDVDPESGNVSSYQPKALKIPDQFGKPRATENVDIGMNLPASE 170



 Score = 67.2 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/212 (11%), Positives = 60/212 (28%), Gaps = 9/212 (4%)

Query: 34  FRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE 93
           + +   +  + V     D       V     + +      ++ G  +     G     + 
Sbjct: 222 YSSTDTEGEKAVNINAGDATNAAGQVGHSIVFNNDGTTQSVNAGQPVTTTPLGANGLNMN 281

Query: 94  SPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK 153
                   +    K  +     +        +  +    + + D   +    G  S    
Sbjct: 282 GADTQ---QTLTMKFDNPTQFSAPFEMRRFSEDGATTGYLSKVDIDKSGNIVGSYSNGKD 338

Query: 154 V-IATMGLYSVDMSQGFVRRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSNANSM 207
           V +  + +  V   QG  +   +  S                S   ++ G LE SN +  
Sbjct: 339 VTLGRVAMVRVTNQQGLAQNGGTQWSTTQASGAAIWGEANQGSFGDIQSGTLEQSNIDMT 398

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            E+  +I   + F + +  +D + +     ++
Sbjct: 399 QELVDLISAQRNFQANSRALDVHNQLQQNILQ 430


>gi|311105935|ref|YP_003978788.1| flagellar hook protein FlgE [Achromobacter xylosoxidans A8]
 gi|310760624|gb|ADP16073.1| flagellar hook protein FlgE [Achromobacter xylosoxidans A8]
          Length = 491

 Score = 78.0 bits (190), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 33/155 (21%), Positives = 62/155 (40%), Gaps = 7/155 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
            F  GL+   A  Q L  + +N++N+ TVGF++    F++V  +      +    V    
Sbjct: 2   GFGQGLSGLNAAAQNLDVIGNNIANSGTVGFKSATASFADVYAS-----SRVGLGVKVAA 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRG--IILTRDGRFKVTDDGSLVSASGKY 121
                 VG+    G E D A++G       + +   ++ TR+G F V  +  +V+A G  
Sbjct: 57  INQRFTVGTVNGGGGEYDIAIDGAKGMFRVTDQSGAVMYTRNGEFLVDKNNFIVNAQGYR 116

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156
                       P + ++       + +  G  +A
Sbjct: 117 LTGYPPGSVGANPVELQLPTANVAPKATSTGTTVA 151



 Score = 72.2 bits (175), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 32/98 (32%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLED 201
             + + +++ T+ L      QG     N+  +              +     V     E 
Sbjct: 392 YTNGETQIVGTIVLADFSNLQGLQPVGNNAWTETSASGQPILGQPGSNGLSKVVGQATES 451

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E+  MI   + + + +  I   ++ M   + 
Sbjct: 452 SNVDMSKELVNMIIAQRTYQANSQTIKTQDEIMQVLMN 489


>gi|144900942|emb|CAM77806.1| flagellar hook protein FlgE precursor [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 430

 Score = 78.0 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 28/115 (24%), Positives = 45/115 (39%), Gaps = 3/115 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           + N  + A  A    LS ++DN+SN+ T G++     F  +V    +        V +  
Sbjct: 6   AMNSAVTALKAQSTALSIISDNLSNSSTTGYKANTTSFKTLVTQSYSSTSYASGGVTASV 65

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALES---PRGIILTRDGRFKVTDDGSLV 115
                  G    T    D AL+GD +F +           TRDG F++   G + 
Sbjct: 66  RQNVAAQGVISGTSNSTDLALDGDGFFVVSYGATGEETFFTRDGEFEIDSAGFMC 120



 Score = 62.2 bits (149), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 46/138 (33%)

Query: 100 LTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG 159
           LT+        D S+ S +G        S      +     +     +I+     +A   
Sbjct: 288 LTQFSSNSDDPDISITSITGDGVEYGALSSVEVDKKGVIWAHFDNGQDIAIYKLAVADFT 347

Query: 160 LYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
             +   +QG+   + +  S +       +    T+    LE S  ++  E  +MI   Q 
Sbjct: 348 NANGLENQGYGVYQQTSASGDFTLHEAGEDGVATITPSALESSTVDTSDEFTRMIVAQQA 407

Query: 220 FNSITTLIDENEKSMLEA 237
           +++ + +I        + 
Sbjct: 408 YSAASQVISTASDMFDDL 425


>gi|317406201|gb|EFV86450.1| flagellar hook protein FlgE [Achromobacter xylosoxidans C54]
          Length = 495

 Score = 78.0 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 65/155 (41%), Gaps = 7/155 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
            F  GL+   A  Q L  + +N++N+ TVGF++    F++V  + +  +  K++ +    
Sbjct: 2   GFGQGLSGLNAAAQNLDVIGNNIANSGTVGFKSSTASFADVYASSRVGLGTKVAAI---- 57

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRG--IILTRDGRFKVTDDGSLVSASGKY 121
                 VG+    G E D A++G       +     I+ TR+G F V  +  +V+A G  
Sbjct: 58  -TQRFTVGTVNGGGGEYDIAIDGAKGMFRVTDESGAIMYTRNGEFLVDKNNFIVNAQGYR 116

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156
                A      P + ++       + +     +A
Sbjct: 117 LTGYPAGAIGANPVELQLPTANVAPKATTTATTVA 151



 Score = 72.2 bits (175), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 30/98 (30%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLED 201
             + +  ++ T+ L      QG     N+                 +     V     E 
Sbjct: 396 YTNGETSIVGTIVLADFANLQGLQPVGNNAWKETATSGQPILGQPGSNGLSKVVGQATES 455

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E+  MI   + + + +  I   ++ M   + 
Sbjct: 456 SNVDMSKELVNMIIAQRTYQANSQTIKTQDEIMQVLMN 493


>gi|238796904|ref|ZP_04640408.1| Flagellar basal body FlaE domain protein [Yersinia mollaretii ATCC
           43969]
 gi|238719164|gb|EEQ10976.1| Flagellar basal body FlaE domain protein [Yersinia mollaretii ATCC
           43969]
          Length = 407

 Score = 78.0 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/134 (24%), Positives = 61/134 (45%), Gaps = 6/134 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
            F+ GL+   A  Q L  V +N++N+ TVGF++  + F++V         Q    V    
Sbjct: 2   GFSQGLSGLNAASQALDVVGNNIANSQTVGFKSGSIAFADVFA-----GSQVGMGVQVSS 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122
              +   G   S  + LD  ++G+ +F L +    +  +R+G+FK  ++G +++  G + 
Sbjct: 57  VNQNFSDGVLGSGASSLDMGIQGNGFFRLTNEAGRVFYSRNGQFKQDENGFIINNQGMFL 116

Query: 123 VLDMASVPIQIPQK 136
               AS      Q 
Sbjct: 117 TGYQASGTPPAIQP 130



 Score = 69.1 bits (167), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 14/123 (11%), Positives = 35/123 (28%), Gaps = 5/123 (4%)

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI-SPN 180
           P     +                    + + +++  + L +     G   + ++      
Sbjct: 283 PTTTGYAPGQMNGYTVGDNGQIIASYSNGQQQLLGQVVLSNFTNPGGLSSQGDNCWSETP 342

Query: 181 IPPTPLE----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
               P++      +   +    LE SN +   EM  MI   + + S +  I    + +  
Sbjct: 343 ASGQPVDGIAGTGNLGNLFGNRLEASNVDLSKEMVNMIVYQRNYQSNSQTIKTQSELLQI 402

Query: 237 AIR 239
              
Sbjct: 403 LAN 405


>gi|159045919|ref|YP_001534713.1| flagellar hook protein FlgE [Dinoroseobacter shibae DFL 12]
 gi|157913679|gb|ABV95112.1| flagellar hook protein FlgE [Dinoroseobacter shibae DFL 12]
          Length = 434

 Score = 78.0 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 60/163 (36%), Gaps = 9/163 (5%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
           +S N G++   A   RL+T++DN++N+ T G++  +  F  +V    +        V   
Sbjct: 5   SSLNAGVSGLNANATRLATISDNIANSSTYGYKRAEADFQSLVINGNSSGTYSAGGVRVT 64

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALES---------PRGIILTRDGRFKVTDDGS 113
              +  E G  ++T    D A+ G     + +            + L   G F    DG 
Sbjct: 65  TTRVIDEQGPLVTTSNPTDLAVGGSGMLPVTTLSALDENTGGYPLSLMTTGSFSPNADGV 124

Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156
           L + +G   +   A+    +P+       G +       +   
Sbjct: 125 LTTETGMVLMGWPAAPDGTVPEFPRDTVDGLEPITVNLNQFAG 167



 Score = 72.6 bits (176), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 17/98 (17%), Positives = 36/98 (36%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLED 201
             +   + I  + L  V    G + R+N     +    P       +     V    LE+
Sbjct: 334 YDTGFTRTIYQVPLADVPNPNGLLSRDNQSYMISPESGPFFLWNAGEGPTGDVIGFALEE 393

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           S A+   E+ ++I   + ++S   +I   ++ + E   
Sbjct: 394 SAADVAGELTRLITTQRAYSSNAKIIQTVDEMLQETTN 431


>gi|307945688|ref|ZP_07661024.1| flagellar basal body FlaE domain protein [Roseibium sp. TrichSKD4]
 gi|307771561|gb|EFO30786.1| flagellar basal body FlaE domain protein [Roseibium sp. TrichSKD4]
          Length = 459

 Score = 78.0 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 66/191 (34%), Gaps = 12/191 (6%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           + N  ++   A  + L  ++ N++N+ T G++ +   F+++V    +    ++S      
Sbjct: 6   AINSAVSGLTAQSRALENISGNVANSQTTGYKRLDTTFADLVSGGGSRQATQVSGTTYAT 65

Query: 64  EY-LSKEVGSFISTGTELDFALEGDAWF-----------ALESPRGIILTRDGRFKVTDD 111
               +   G   +       A+ G+ +F                     TR G F+   +
Sbjct: 66  SRATNTLQGDIAARDVGTYMAINGEGYFIVTEANAVVDGTTSFEETDYYTRAGDFERDQN 125

Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171
           G LV++SG Y      +     P  D    V    +     K  A     ++  +    R
Sbjct: 126 GYLVNSSGYYLQGFELNPDTGNPVGDTPEVVQISDQPLPANKTTAINYQANLPPTPETNR 185

Query: 172 RENSGISPNIP 182
            +++    N  
Sbjct: 186 AKSNPDLANSD 196



 Score = 61.4 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 13/120 (10%), Positives = 42/120 (35%), Gaps = 1/120 (0%)

Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN-IP 182
            D       +    +          + + + +  + L + +      R + +  +     
Sbjct: 340 QDGYPAGELVGIAVDSSGRVNASYSNSQTRALYEIPLATFEAEFELRRVDGAAFAATSTS 399

Query: 183 PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
             P+   S   +    +E SNA+   E  ++I   Q +++ + ++   ++ +  A+  + 
Sbjct: 400 GAPVLISSNGNIVPEAVELSNADIATEFSKLIVTQQAYSANSRIVTSADEMLDSALNMVR 459


>gi|300716218|ref|YP_003741021.1| flagellar biosynthesis, hook protein [Erwinia billingiae Eb661]
 gi|299062054|emb|CAX59170.1| Flagellar biosynthesis, hook protein [Erwinia billingiae Eb661]
          Length = 414

 Score = 78.0 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 18/144 (12%), Positives = 44/144 (30%), Gaps = 5/144 (3%)

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           T +     +   +  +++   P  D          +            +++ + +  + L
Sbjct: 269 TFNLNLAGSQQQNTGTSTFGNPTQDGYKPGDLTSYQINNDGTVVGTYSNEQTQTLGQIAL 328

Query: 161 YSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIH 215
            +    +G     N+  S                +  T+  G LE SN +   E+  MI 
Sbjct: 329 ANFANPEGLKSEGNNVWSATNSSGQALVGLAGTGNLGTLTAGALESSNVDLSKELVNMIV 388

Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239
             + + S    I   ++ +   + 
Sbjct: 389 AQRNYQSNAQTIKTQDQILNTLVN 412



 Score = 72.6 bits (176), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 66/192 (34%), Gaps = 15/192 (7%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ TVGF++  V F+++    K  +      V    
Sbjct: 2   AFSQAVSGLNAASSNLDVIGNNIANSATVGFKSATVSFADMFADSKVGL-----GVKVAA 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  ST   LD A+    +F +      +  +R+G+F +  + ++V+A G   
Sbjct: 57  VTQDFNDGTTTSTSRGLDVAISQSGFFRMTDTSGAVYYSRNGQFTLDANRNIVNADGLQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
                                + G       V  T        +   V   NS  S    
Sbjct: 117 TG---------YPATGTPPTVQTGANPVALNVPTTAMSAKATSAAALVANLNSTDSTPTK 167

Query: 183 PTPLEDLSGVTV 194
                +    ++
Sbjct: 168 DWATTNTDLSSI 179


>gi|156934440|ref|YP_001438356.1| flagellar hook protein FlgE [Cronobacter sakazakii ATCC BAA-894]
 gi|156532694|gb|ABU77520.1| hypothetical protein ESA_02271 [Cronobacter sakazakii ATCC BAA-894]
          Length = 409

 Score = 78.0 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/172 (19%), Positives = 70/172 (40%), Gaps = 6/172 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++  V F+++    K  +  K++ +    
Sbjct: 2   AFSQAVSGLNAASTNLDVIGNNIANSATYGFKSGSVSFADMFAGSKAGLGVKVAGI---- 57

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G   +TG +LD A+  + +F  L+S  G+  +R+G+FK+ +  +LV+  G   
Sbjct: 58  -TQDFGDGVTTNTGRKLDVAISQNGFFRLLDSNGGVFYSRNGQFKLDEKSNLVNMQGMQV 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174
               A+      Q+                    +        S   V  ++
Sbjct: 117 TGYPATGTPPTIQQGADPIPLTIPTAQMPASQTTSANFVMNLNSSDDVPAQS 168



 Score = 76.1 bits (185), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             +       +  +            ++K +++  + L +    +G   + ++  S +  
Sbjct: 286 NQNGYKPGDLVGYQVNEDGSLVGNYSNEKSQLLGQIVLANFANPEGLSSQGDNVWSASTA 345

Query: 183 PTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                       +   +  G LE SN +   E+  MI   + + S    I   ++ +   
Sbjct: 346 SGVALLGSAGTGNFGKLTSGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 405

Query: 238 IR 239
           + 
Sbjct: 406 VN 407


>gi|90422390|ref|YP_530760.1| flagellar hook protein FlgE [Rhodopseudomonas palustris BisB18]
 gi|90104404|gb|ABD86441.1| flagellar basal body FlaE [Rhodopseudomonas palustris BisB18]
          Length = 419

 Score = 78.0 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 58/133 (43%), Gaps = 3/133 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           + +  ++A  A    ++ ++DN++N+ TVG++T    F  +V +  +        V +  
Sbjct: 6   ALSSAISALSAQSSAMAMISDNIANSQTVGYKTTSASFQALVTSSSSATTYSSGGVTTLS 65

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALE---SPRGIILTRDGRFKVTDDGSLVSASGK 120
                E G   +T +  D  + G+ +F +    +    + TR G F + D G LVS+ G 
Sbjct: 66  RSNISEQGLLTTTTSATDIGISGNGFFPVTTALTGGSTLYTRSGSFTIDDSGYLVSSGGA 125

Query: 121 YPVLDMASVPIQI 133
           Y +         I
Sbjct: 126 YLLGWRTDADGNI 138


>gi|323137001|ref|ZP_08072081.1| fagellar hook-basal body protein [Methylocystis sp. ATCC 49242]
 gi|322397762|gb|EFY00284.1| fagellar hook-basal body protein [Methylocystis sp. ATCC 49242]
          Length = 417

 Score = 78.0 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 2/126 (1%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
           FN  +    A    L+ +++N++N+ TVG++     F  V+   +   +Q    V++   
Sbjct: 8   FNTSIMGMSAQSDALANISENIANSGTVGYKRATTHFLTVLSGFQ-GSNQFGGGVSTRSR 66

Query: 65  YLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYPV 123
           Y     G+ + TG+  D A+ G+ +F +     G  LTR G F     G LV+A+G Y +
Sbjct: 67  YDITGQGALMHTGSSTDMAIRGNGFFVVSDGAGGTFLTRAGSFVPDSSGRLVNAAGYYLM 126

Query: 124 LDMASV 129
              A  
Sbjct: 127 GFPAGP 132



 Score = 56.0 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 12/96 (12%), Positives = 31/96 (32%), Gaps = 6/96 (6%)

Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNAN 205
           +      +G+ +V           +  +      P+   +        +    LE SN +
Sbjct: 322 QMVPAYLIGIANVAAPTELASYTGNVYTATGASGPISVGAPGKGGFGDIASATLEASNVD 381

Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
              E+  MI   + + + T       + + + + N+
Sbjct: 382 LATELSTMIIAQRSYTANTQSFQVASEIL-QVLNNL 416


>gi|85706142|ref|ZP_01037237.1| flagellar hook protein FlgE, putative [Roseovarius sp. 217]
 gi|85669306|gb|EAQ24172.1| flagellar hook protein FlgE, putative [Roseovarius sp. 217]
          Length = 448

 Score = 78.0 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/165 (21%), Positives = 68/165 (41%), Gaps = 10/165 (6%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
           +S N  +A   A   RL+T++DN++N+ T G+R ++  F  +V + +         V + 
Sbjct: 20  SSLNASVAGLNANATRLATISDNIANSSTFGYRRVEADFESLVISGRGGSYSAG-GVRAS 78

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFAL---------ESPRGIILTRDGRFKVTDDGS 113
            + L  + GS +S+    D A+    +  +              ++LT  G F+    G 
Sbjct: 79  TQRLIDQGGSIVSSSNPTDLAVRDRGFLPVARVTDLTVSNGDPQMLLTTTGSFRTDPQGR 138

Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158
           LV+ SG   +   A+    IP+     + G +       ++    
Sbjct: 139 LVTESGLVLLGWPANPDGTIPEFSRDTSGGLEPVQINVNQLTGEP 183



 Score = 69.5 bits (168), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 16/123 (13%), Positives = 38/123 (30%), Gaps = 5/123 (4%)

Query: 125 DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP- 183
           D + V      + +          +   ++I  + L  +    G V  +     P+    
Sbjct: 326 DGSPVGNMTSAEVDANGFVRASFDTGVSRIIYQVPLVDLPNPNGMVSMDQQTYQPSPDSG 385

Query: 184 ----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
                   D     +     ++S  +   E+  MI   + ++S   +I   ++ + E   
Sbjct: 386 SFFLWDAGDGPTGDIVAFARQESATDVARELTDMIQTQRAYSSNAKVIQTVDEMLQETTN 445

Query: 240 NIA 242
            I 
Sbjct: 446 IIR 448


>gi|330943210|gb|EGH45617.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv.
           pisi str. 1704B]
          Length = 133

 Score = 78.0 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 12/131 (9%), Positives = 38/131 (29%), Gaps = 5/131 (3%)

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
           +     P + +           +          +   ++I  +         G      +
Sbjct: 3   NGYALEPAIVVPQNAQTFTVGQDGTVSVTLAGATATPQIIGNIQTADFINPAGLQAMGGN 62

Query: 176 GISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
                      +  +          +  LE+SN +++ E+  MI   + +   + +I   
Sbjct: 63  LYLETGSSGAPQIGTPGLNGLGPTLQNTLENSNVSTVEELVNMITTQRAYEMNSKVISTA 122

Query: 231 EKSMLEAIRNI 241
           ++ +    +N+
Sbjct: 123 DQMLQNLTQNL 133


>gi|22127327|ref|NP_670750.1| flagellar hook protein FlgE [Yersinia pestis KIM 10]
 gi|45442796|ref|NP_994335.1| flagellar hook protein FlgE [Yersinia pestis biovar Microtus str.
           91001]
 gi|108809055|ref|YP_652971.1| flagellar hook protein FlgE [Yersinia pestis Antiqua]
 gi|108810748|ref|YP_646515.1| flagellar hook protein FlgE [Yersinia pestis Nepal516]
 gi|145597817|ref|YP_001161893.1| flagellar hook protein FlgE [Yersinia pestis Pestoides F]
 gi|150260249|ref|ZP_01916977.1| lateral flagellar hook protein [Yersinia pestis CA88-4125]
 gi|162421081|ref|YP_001604847.1| flagellar hook protein FlgE [Yersinia pestis Angola]
 gi|165924960|ref|ZP_02220792.1| flagellar hook protein [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165939066|ref|ZP_02227618.1| flagellar hook protein [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|166008888|ref|ZP_02229786.1| flagellar hook protein [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166211930|ref|ZP_02237965.1| flagellar hook protein [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167399572|ref|ZP_02305096.1| flagellar hook protein [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167419268|ref|ZP_02311021.1| flagellar hook protein [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167425161|ref|ZP_02316914.1| flagellar hook protein [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|167466340|ref|ZP_02331044.1| flagellar hook protein [Yersinia pestis FV-1]
 gi|218927912|ref|YP_002345787.1| flagellar hook protein FlgE [Yersinia pestis CO92]
 gi|229837408|ref|ZP_04457571.1| Flagellar hook protein flgE [Yersinia pestis Pestoides A]
 gi|229840621|ref|ZP_04460780.1| Flagellar hook protein flgE [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229842828|ref|ZP_04462980.1| Flagellar hook protein flgE [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229900945|ref|ZP_04516069.1| Flagellar hook protein flgE [Yersinia pestis Nepal516]
 gi|270487673|ref|ZP_06204747.1| flagellar hook protein FlgE [Yersinia pestis KIM D27]
 gi|294502788|ref|YP_003566850.1| flagellar hook protein [Yersinia pestis Z176003]
 gi|21960408|gb|AAM87001.1|AE013948_9 putative flagellar hook protein [Yersinia pestis KIM 10]
 gi|45437662|gb|AAS63212.1| flagellar hook protein FlgE [Yersinia pestis biovar Microtus str.
           91001]
 gi|108774396|gb|ABG16915.1| flagellar hook protein [Yersinia pestis Nepal516]
 gi|108780968|gb|ABG15026.1| putative flagellar hook protein [Yersinia pestis Antiqua]
 gi|115346523|emb|CAL19399.1| putative flagellar hook protein [Yersinia pestis CO92]
 gi|145209513|gb|ABP38920.1| flagellar hook protein [Yersinia pestis Pestoides F]
 gi|149289657|gb|EDM39734.1| lateral flagellar hook protein [Yersinia pestis CA88-4125]
 gi|162353896|gb|ABX87844.1| flagellar hook protein [Yersinia pestis Angola]
 gi|165913022|gb|EDR31647.1| flagellar hook protein [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|165923160|gb|EDR40311.1| flagellar hook protein [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165992227|gb|EDR44528.1| flagellar hook protein [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166206676|gb|EDR51156.1| flagellar hook protein [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166963262|gb|EDR59283.1| flagellar hook protein [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167052076|gb|EDR63484.1| flagellar hook protein [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167055924|gb|EDR65705.1| flagellar hook protein [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|229682284|gb|EEO78376.1| Flagellar hook protein flgE [Yersinia pestis Nepal516]
 gi|229690095|gb|EEO82152.1| Flagellar hook protein flgE [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229696987|gb|EEO87034.1| Flagellar hook protein flgE [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229705531|gb|EEO91541.1| Flagellar hook protein flgE [Yersinia pestis Pestoides A]
 gi|262360820|gb|ACY57541.1| flagellar hook protein [Yersinia pestis D106004]
 gi|270336177|gb|EFA46954.1| flagellar hook protein FlgE [Yersinia pestis KIM D27]
 gi|294353247|gb|ADE63588.1| flagellar hook protein [Yersinia pestis Z176003]
 gi|320016711|gb|ADW00283.1| Flagellar hook protein flgE [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 413

 Score = 78.0 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/132 (27%), Positives = 57/132 (43%), Gaps = 6/132 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SF+I   A  A  ++L+T+++N++N+ T GF+  + +FS +         Q +    SG 
Sbjct: 2   SFSIANTALNAHTEQLNTISNNIANSATKGFKASRTEFSSMYAQS-----QPLGVAVSGV 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122
                + G    TG  LD A+ G  +F +         TR G F+   DG LV+  G   
Sbjct: 57  SQNISKDGQKEKTGMGLDLAISGGGFFVVRESSGDKAYTRAGMFRSDVDGYLVNGQGMKL 116

Query: 123 VLDMASVPIQIP 134
               A     I 
Sbjct: 117 QGYPADAAGNIQ 128



 Score = 69.9 bits (169), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 22/140 (15%), Positives = 48/140 (34%), Gaps = 9/140 (6%)

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
                G   + +             +I     ++     GE   +GKV+    L +    
Sbjct: 278 TQLSQGFTTTRNKSDGYTSGVKNAERIESDGSVYATFSNGERVLQGKVV----LANFASP 333

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFN 221
            G V +  +  S +         +  T     ++ G LE+SN +   E+  ++   + + 
Sbjct: 334 SGLVTQNGTSWSESNKSGAALLGTPGTGLLGSLESGALENSNVDITAELVGLMTAQRNYQ 393

Query: 222 SITTLIDENEKSMLEAIRNI 241
           + T +I  N+  M    + +
Sbjct: 394 ASTKIISTNDSMMNALFQVL 413


>gi|308186393|ref|YP_003930524.1| Flagellar hook protein FlgE [Pantoea vagans C9-1]
 gi|308056903|gb|ADO09075.1| Flagellar hook protein FlgE [Pantoea vagans C9-1]
          Length = 418

 Score = 78.0 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 16/125 (12%), Positives = 39/125 (31%), Gaps = 5/125 (4%)

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
             P  D  +                    +QK +++  + L S    +G   + ++    
Sbjct: 292 GSPTQDGYAPGDLTSYAINDDGTITGSYSNQKTQLLGQIVLSSFSNPEGLESKGDNVWQA 351

Query: 180 NIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
           +              +  ++  G LE SN +   E+  MI   + + +    I   ++ +
Sbjct: 352 SSASGQAAIGLANTGTFGSLTAGALESSNVDMSKELVNMIVAQRNYQANAQTIKTQDQIL 411

Query: 235 LEAIR 239
              + 
Sbjct: 412 NTLVN 416



 Score = 76.8 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 75/195 (38%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SF+  ++   A    L  + +N++N+ T GF++  + F+++       +  K++ V    
Sbjct: 2   SFSQAVSGLGAASSNLDVIGNNIANSATAGFKSSTIAFADMFAGSNVGLGTKVAAV---- 57

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122
              +   G+  +T   LD AL G+ +F +     G+  +R+G+  +  + +LV+  G   
Sbjct: 58  -IQNFNDGATTTTSRGLDVALSGNGFFRMTDSSGGVFYSRNGQLTLDANRNLVNTQGLNV 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               AS      Q        +        +   T GL +   S        +  + N  
Sbjct: 117 TGYPASGSPATIQAGANPVALKIPTTQMSARATTTAGLVANLNSTDTTPTVTTFSTANAD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +  + V   +G
Sbjct: 177 SYNKKTTATVFDSQG 191


>gi|238751762|ref|ZP_04613250.1| Flagellar hook protein FlgE [Yersinia rohdei ATCC 43380]
 gi|238710033|gb|EEQ02263.1| Flagellar hook protein FlgE [Yersinia rohdei ATCC 43380]
          Length = 430

 Score = 78.0 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 13/98 (13%), Positives = 33/98 (33%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLED 201
             +Q+ +++  + + +    +G     ++                      T+  G LE 
Sbjct: 331 YSNQQTQLLGQIVMVNFANPEGLSSAGDNVWKETQTSGSPILGIAGSGGFGTLTSGALES 390

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E+  MI   + + S    I   ++ +   + 
Sbjct: 391 SNVDLSAELVNMIVAQRNYQSNAQTIKTQDQILQTLVN 428



 Score = 75.7 bits (184), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 53/117 (45%), Gaps = 6/117 (5%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
            F+  ++   A    L  + +N++N+ T GF++  V F+++         Q    V    
Sbjct: 2   GFSQAVSGLNAASSNLDVIGNNIANSATSGFKSSSVSFADMFA-----GSQAGMGVQVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
                  G+  +T   LD A+    +F ++    GI   R+G+FK+ ++ ++++  G
Sbjct: 57  ITQDFNDGTATTTNRRLDIAISQSGFFRMQDSTGGIYYARNGQFKLDENRNIINMQG 113


>gi|134283656|ref|ZP_01770355.1| flagellar basal body protein FlaE [Burkholderia pseudomallei 305]
 gi|134245065|gb|EBA45160.1| flagellar basal body protein FlaE [Burkholderia pseudomallei 305]
          Length = 404

 Score = 78.0 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 61/197 (30%), Gaps = 6/197 (3%)

Query: 12  QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVASGKEYLSKE 69
                  L  + +N++N +TVGF+    +FS++          +                
Sbjct: 1   MAGASSDLDVIGNNIANANTVGFKGSTAQFSDMYANSVASAVNNPIGIGTMLASVQQQFS 60

Query: 70  VGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASV 129
            G+  S+ + L+ A+ G+ +F + +      +RDG F+   +G +V++ G   +   A+ 
Sbjct: 61  QGTITSSTSSLNVAINGNGFFQMSNNGVTTYSRDGTFQRDKNGYIVNSQGLNLMGYAANA 120

Query: 130 PIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL 189
              I     +        I+       T                 +   P          
Sbjct: 121 NGVINTAATVPLQAPTTNIAPTATTKITGQFNLNSQDAVPATTPFNYTDPTSYNYTTSVQ 180

Query: 190 SGVTVKRGFLEDSNANS 206
              T+        N N 
Sbjct: 181 VFDTLGGSQ----NVNL 193



 Score = 64.1 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 12/98 (12%), Positives = 34/98 (34%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLED 201
             + +   +  + L + +   G V   N+    +      +       +  T++   LE+
Sbjct: 306 YSNGQTSTLGQIVLANFNNPNGLVNVGNNQYVESAASGVPQISAPGSTNHGTLQGSALEN 365

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   ++ ++I   + + +    I   +      I 
Sbjct: 366 SNVDLTSQLVKLITAQRNYQANAQTIKTQQTVDQTLIN 403


>gi|24051371|gb|AAN42702.1| flagellar hook protein FlgE [Shigella flexneri 2a str. 301]
          Length = 642

 Score = 78.0 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 70/195 (35%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 242 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 296

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ +L++  G   
Sbjct: 297 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLLNTQGLQL 356

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
                +      Q+                K   T  +     S   +       + N  
Sbjct: 357 TGYPVTGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNAD 416

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 417 SYNKKGSVTVFDSQG 431



 Score = 71.4 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 21/173 (12%), Positives = 55/173 (31%), Gaps = 6/173 (3%)

Query: 72  SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPI 131
            F + GT +D A+  +      +      T    F  +   +  + +      +      
Sbjct: 469 EFNANGTLVDGAMANNIATGAINGAEPA-TFSLSFLNSMQQNTGANNIVATTQNGYKPGD 527

Query: 132 QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PL 186
            +  +            +++ +++  + L +   ++G     ++  S             
Sbjct: 528 LVSYQINDDGTVVGNNSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTA 587

Query: 187 EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              +  T+  G LE SN +   E+  MI   + + S    I   ++ +   + 
Sbjct: 588 GTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYKSNAQTIKTQDQILNTRVN 640


>gi|260597445|ref|YP_003210016.1| flagellar hook protein FlgE [Cronobacter turicensis z3032]
 gi|260216622|emb|CBA29917.1| Flagellar hook protein flgE [Cronobacter turicensis z3032]
          Length = 410

 Score = 78.0 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/172 (19%), Positives = 69/172 (40%), Gaps = 6/172 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++  V F+++    K  +  K++ +    
Sbjct: 2   AFSQAVSGLNAASTNLDVIGNNIANSATYGFKSGSVSFADMFAGSKAGLGVKVAGI---- 57

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G   +TG +LD A+  + +F  L+S  G+  +R+G+FK+ +  +LV+  G   
Sbjct: 58  -TQDFGDGVTTNTGRKLDVAISQNGFFRLLDSNGGVFYSRNGQFKLDEKSNLVNMQGMQV 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174
               A+      Q+                    +        S   V  + 
Sbjct: 117 TGYPATGTPPTVQQGADPIPLTIPTAQMPASQTTSANFVMNLNSSDDVPAQT 168



 Score = 76.4 bits (186), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 24/198 (12%), Positives = 58/198 (29%), Gaps = 10/198 (5%)

Query: 51  DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTD 110
           ++D  +S         S       +     + A  G     +        +    F +  
Sbjct: 212 NMDTSVSSATPTTPLTSLTFSDSGALTGITNAAPAGSQQVPISVTSLNG-SAAFSFSMNL 270

Query: 111 DGSLVSASGKYPVLDMAS----VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
            G+    SG   +L            +  +            ++K +++  + L +    
Sbjct: 271 TGTTQQNSGANVLLTSNQNGYKPGDLVGYQVNEDGSLVGNYSNEKSQLLGQIVLANFANP 330

Query: 167 QGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221
           +G   + ++  S +              +   +  G LE SN +   E+  MI   + + 
Sbjct: 331 EGLSSQGDNVWSASTASGVALLGSAGTGNFGKLTSGALEASNVDLSKELVNMIVAQRNYQ 390

Query: 222 SITTLIDENEKSMLEAIR 239
           S    I   ++ +   + 
Sbjct: 391 SNAQTIKTQDQILNTLVN 408


>gi|146341930|ref|YP_001206978.1| putative flagellar hook protein flgE [Bradyrhizobium sp. ORS278]
 gi|146194736|emb|CAL78761.1| putative Flagellar hook protein flgE [Bradyrhizobium sp. ORS278]
          Length = 601

 Score = 78.0 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 56/132 (42%), Gaps = 11/132 (8%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           + N  ++   A    L  ++ N++N  TVG++ I   F +++    N   Q    V +  
Sbjct: 6   AMNTSVSGLSAQSFALQNISGNIANASTVGYKGIGTSFEDLIPNATNPTRQNAGGVTAFA 65

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRG-----------IILTRDGRFKVTDDG 112
           +      G+  ++    + A+ GD +F ++                  TR G F++  +G
Sbjct: 66  KATITTQGTVSTSSVATNMAINGDGFFNVQKATSVVDNVPVFTGVTNYTRRGDFQLNANG 125

Query: 113 SLVSASGKYPVL 124
           +L++ +G Y + 
Sbjct: 126 NLINGAGYYLMG 137



 Score = 68.7 bits (166), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 12/92 (13%), Positives = 31/92 (33%)

Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEM 210
           +   +A + L   + +      +                +   +  G LE SN +   E 
Sbjct: 510 QTINLAQVTLSHFNGTNYLKALDGGAYEATDQSGQAIIGASGKISGGSLEGSNTDIADEF 569

Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            ++I   Q +++ T +I      + + +  + 
Sbjct: 570 TKLIVTQQAYSANTKVITTANSMVQDLLNVLR 601


>gi|306841276|ref|ZP_07473987.1| flagellar hook protein FlgE [Brucella sp. BO2]
 gi|306288678|gb|EFM60009.1| flagellar hook protein FlgE [Brucella sp. BO2]
          Length = 383

 Score = 77.6 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/112 (33%), Positives = 57/112 (50%), Gaps = 2/112 (1%)

Query: 12  QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
             A   RLSTVADN++N  TVG++  + +FS +V           S V +   Y   + G
Sbjct: 1   MNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAGQYNSGS-VLTDVRYGISDQG 59

Query: 72  SFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASGKYP 122
              ST +  D A++G+ +F ++ P G    TR G F    +G LV+++G Y 
Sbjct: 60  GIRSTSSTTDLAIDGNGYFVVQGPGGSTYLTRAGSFVPDKNGDLVNSAGYYL 111



 Score = 69.1 bits (167), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 22/54 (40%)

Query: 186 LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +      +  G LE+SNA+   E+  MI   + + + + +     + M   + 
Sbjct: 327 PQGDGMGKIMSGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGSELMDVLVN 380


>gi|254502675|ref|ZP_05114826.1| conserved domain protein [Labrenzia alexandrii DFL-11]
 gi|222438746|gb|EEE45425.1| conserved domain protein [Labrenzia alexandrii DFL-11]
          Length = 477

 Score = 77.6 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 44/223 (19%), Positives = 76/223 (34%), Gaps = 25/223 (11%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN-DIDQKISFVASG 62
           + N  ++   A    L  ++ N++N+ TVGF+ +   FS++V    +   DQ      + 
Sbjct: 6   AINSAVSGLSAQATALENISGNVANSQTVGFKRLDTTFSDLVSGGGSTQADQVSGTTYAT 65

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWF-----------ALESPRGIILTRDGRFKVTDD 111
               +   G   S   +   A+ G+ +F           +         TR G F+V  +
Sbjct: 66  SRATNTIGGDISSNDVDTYMAINGEGYFVVTQAADFVDGSTTFADDTFYTRAGDFEVNKE 125

Query: 112 GSLVSASG------------KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG 159
           G  V+ SG              PV D  SV     Q     +       +   +V AT  
Sbjct: 126 GYFVNQSGYYLKGFPLDPATGNPVGDNPSVIQINSQPLAASSTTTVNYQASLPRVPATTN 185

Query: 160 LYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDS 202
                 +   +    +G +P       E     T++  FL  S
Sbjct: 186 YDPNTANSELLNDGANG-APGPNLGATEIGDTGTLEADFLASS 227



 Score = 67.6 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 14/96 (14%), Positives = 38/96 (39%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANS 206
             + + + +  + L +    Q   R + +  +        +   G  V    LE SNA+ 
Sbjct: 382 YSNNQTRALYEIPLATFQAEQSLRRVDGAAFAATSDSGDADLSGGGAVISNALELSNADI 441

Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
             E  ++I   Q +++ + ++   ++ +  A+  + 
Sbjct: 442 ADEFSKLIITQQAYSANSRIVTSADEMLDSALNMVR 477


>gi|254445148|ref|ZP_05058624.1| conserved domain protein [Verrucomicrobiae bacterium DG1235]
 gi|198259456|gb|EDY83764.1| conserved domain protein [Verrucomicrobiae bacterium DG1235]
          Length = 510

 Score = 77.6 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/177 (18%), Positives = 62/177 (35%), Gaps = 17/177 (9%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN------------- 50
           + + G++A  +  + +  + +N++N +TV F++ ++K+SE    +               
Sbjct: 5   ALSSGISALNSFSKGMEVIGNNIANVNTVSFKSSRIKYSETFNQVLKQSAPSPSSGDRSN 64

Query: 51  -DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG---IILTRDGRF 106
               Q    V           G   ST    D A+ G+ +F +E P+       TR G F
Sbjct: 65  VQASQVGLGVQVEGIVGQFHQGGLSSTNQLTDLAISGEGFFLVEDPKNATSQFATRGGDF 124

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
           ++ D G LV++ G                  E            +   IA      +
Sbjct: 125 RIDDRGFLVTSGGMRVQGLTGGSIGFEVDVGEDGKWQFVPNEDTQNGTIAPESYGDI 181



 Score = 71.4 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 24/51 (47%)

Query: 189 LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
               ++++G LE SN +   E   MI   + F + + +I  ++  + E + 
Sbjct: 457 NGLGSIQQGALELSNVDLTNEFANMITTQRGFQAGSRIITVSDDILQEVVN 507


>gi|242238969|ref|YP_002987150.1| flagellar hook protein FlgE [Dickeya dadantii Ech703]
 gi|242131026|gb|ACS85328.1| flagellar basal body FlaE domain protein [Dickeya dadantii Ech703]
          Length = 399

 Score = 77.6 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 54/130 (41%), Gaps = 6/130 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
            F+  ++   A    L  + +N++N++T GF++  V F+++       +      V    
Sbjct: 2   GFSQAVSGLNAASSNLDVIGNNIANSETTGFKSASVSFADIYADSAVGL-----GVKVAS 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122
              +   G+  ST    D A+    +F +      +  TR+G F +  D +LV+ +G Y 
Sbjct: 57  VTQNFTDGTVESTDVGTDVAISKTGFFRVTDDSGSVYYTRNGEFTLDSDRNLVTKTGYYV 116

Query: 123 VLDMASVPIQ 132
               A+    
Sbjct: 117 TGYAATGTPP 126



 Score = 76.1 bits (185), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 17/125 (13%), Positives = 36/125 (28%), Gaps = 5/125 (4%)

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                D  +                    + + +++  + L S    QG   + ++  S 
Sbjct: 273 NTKSQDGYTAGSLTSYTINDDGTITGTYSNSQTQLLGQIVLASFSNPQGLSSQGDNVWSE 332

Query: 180 NIPPTPLEDLS-----GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
                     +       T+  G LE SN +   E+  MI   + + S    I   +  +
Sbjct: 333 TSASGQALLGTAGTGVFGTLTSGALESSNVDISQELVNMIVAQRNYQSNAQTIKTQDAIL 392

Query: 235 LEAIR 239
              + 
Sbjct: 393 NTLVN 397


>gi|83955135|ref|ZP_00963791.1| putative flagellar hook protein [Sulfitobacter sp. NAS-14.1]
 gi|83840464|gb|EAP79637.1| putative flagellar hook protein [Sulfitobacter sp. NAS-14.1]
          Length = 433

 Score = 77.6 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 29/82 (35%), Gaps = 5/82 (6%)

Query: 163 VDMSQGFVRRENSGISPNI-----PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217
           V    G V  + +    +              +  ++  G LE SN +   EM  +I   
Sbjct: 349 VANPNGLVEVKGNAYRLSGETGSFSALQANSSTVGSINAGALEGSNVDIAQEMTDLIKAQ 408

Query: 218 QKFNSITTLIDENEKSMLEAIR 239
           + F++   +I   +  M E  R
Sbjct: 409 RAFSTNAKVITTVDDMMDETTR 430



 Score = 71.1 bits (172), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/138 (23%), Positives = 64/138 (46%), Gaps = 10/138 (7%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-DQKISFVAS 61
           ++   G++   A  + + ++++N++N++TVG+R     F+ +V    +      +  V +
Sbjct: 5   SALQTGVSGLRANSKAVGSISENIANSNTVGYRRG---FAHMVTTTASGGNGDGVLSVNA 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI------ILTRDGRFKVTDDGSLV 115
            +E      G  IST +  D A+ G+ +FA+            +LTR G F   + G+L 
Sbjct: 62  VEELDISTAGGLISTNSSTDLAIGGNGFFAVSMNPNETVQTNYMLTRAGSFLPDEQGNLK 121

Query: 116 SASGKYPVLDMASVPIQI 133
           +A+G Y       +   I
Sbjct: 122 NAAGYYLAGYPYGLEGDI 139


>gi|83944165|ref|ZP_00956621.1| putative flagellar hook protein [Sulfitobacter sp. EE-36]
 gi|83845032|gb|EAP82913.1| putative flagellar hook protein [Sulfitobacter sp. EE-36]
          Length = 433

 Score = 77.6 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 29/82 (35%), Gaps = 5/82 (6%)

Query: 163 VDMSQGFVRRENSGISPNI-----PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217
           V    G V  + +    +              +  ++  G LE SN +   EM  +I   
Sbjct: 349 VANPNGLVEVKGNAYRLSGETGSFSALQANSSTVGSINAGALEGSNVDIAQEMTDLIKAQ 408

Query: 218 QKFNSITTLIDENEKSMLEAIR 239
           + F++   +I   +  M E  R
Sbjct: 409 RAFSTNAKVITTVDDMMDETTR 430



 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/138 (23%), Positives = 64/138 (46%), Gaps = 10/138 (7%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-DQKISFVAS 61
           ++   G++   A  + + ++++N++N++TVG+R     F+ +V    +      +  V +
Sbjct: 5   SALQTGVSGLRANSKAVGSISENIANSNTVGYRRG---FAHMVTTTASGGNGDGVLSVNA 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI------ILTRDGRFKVTDDGSLV 115
            +E      G  IST +  D A+ G+ +FA+            +LTR G F   + G+L 
Sbjct: 62  VEELDIATAGGLISTNSSTDLAIGGNGFFAVSMNPNETVQTNYMLTRAGSFLPDEQGNLK 121

Query: 116 SASGKYPVLDMASVPIQI 133
           +A+G Y       +   I
Sbjct: 122 NAAGYYLAGYPYGLEGDI 139


>gi|37525841|ref|NP_929185.1| flagellar hook protein FlgE [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36785270|emb|CAE14211.1| Flagellar hook protein FlgE [Photorhabdus luminescens subsp.
           laumondii TTO1]
          Length = 404

 Score = 77.6 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 73/192 (38%), Gaps = 8/192 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N  T GF++  V FS++    +  +  K+S V    
Sbjct: 2   AFSQAVSGLNAAAGNLDVIGNNIANAATYGFKSSTVAFSDIFAGSQVGLGVKVSGVN--- 58

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122
              + + G+  +T   LD A+    +F ++    GI  +R+G+FK+ ++ ++++  G   
Sbjct: 59  --QNFKDGTPTTTNRTLDLAITQGGFFRMQGGDGGIYYSRNGQFKMDENRNIINMQG--M 114

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
            L             EI        I+    ++       V M+               P
Sbjct: 115 KLTGYPAASVNGGAPEIQKGANPEPITIPQGILMAKATTKVTMTANLNSMHKKPTEAFSP 174

Query: 183 PTPLEDLSGVTV 194
                     +V
Sbjct: 175 ENNDSYNYPTSV 186



 Score = 76.8 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 16/129 (12%), Positives = 41/129 (31%), Gaps = 5/129 (3%)

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
           + S   P  D  +       + E          +++ +++  + L +    +G   + ++
Sbjct: 274 TDSISAPKQDGYAAGEFKGYRIEQDGRVIGTYTNEQSQLLGQIVLTNFANPEGLAAKGDN 333

Query: 176 GISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
                           +      +  G LE SN +   E+  MI   + + S    I   
Sbjct: 334 VWVETSASGNPVVGIADSGGFGKLLSGSLEASNVDMSQELVNMIVAQRNYQSSAQTIKTQ 393

Query: 231 EKSMLEAIR 239
           ++ +   + 
Sbjct: 394 DQILQTLVS 402


>gi|157373207|ref|YP_001471807.1| flagellar hook protein FlgE [Shewanella sediminis HAW-EB3]
 gi|157315581|gb|ABV34679.1| flagellar basal body FlaE [Shewanella sediminis HAW-EB3]
          Length = 398

 Score = 77.6 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 47/193 (24%), Positives = 75/193 (38%), Gaps = 10/193 (5%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SFNI L+   A  Q L+T+++N++N+ TVG+R  + +FS V      +  Q         
Sbjct: 2   SFNIALSGLQATTQDLNTISNNIANSSTVGYRGGRSEFSAVY-----NGGQAGGVNVMST 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  GS + TG ELD  ++GD +F L       + +R G F    DG +   +G   
Sbjct: 57  SQNFSMGGSLVYTGRELDMGIQGDGFFVLSGQDGSTLYSRAGMFSQDADGYITDPAGNRL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
                    Q+   +      + G +  K    AT  +  V      +   +   +P  P
Sbjct: 117 QGYPVGAGGQLQTGNVSDLQVQSGSLPAK----ATTDVGVVSNLDASMEPIDQTTTPFDP 172

Query: 183 PTPLEDLSGVTVK 195
                  S  TV 
Sbjct: 173 DDISSYHSSGTVA 185



 Score = 70.3 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 22/161 (13%), Positives = 52/161 (32%), Gaps = 12/161 (7%)

Query: 86  GDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEK 145
           G    A      +      ++      S ++ +G           +++     ++     
Sbjct: 245 GTPGGAAPMSLDLSYKNSTQYASDYSNSSLTQNGYT---SGELNGVRLDDNGMVYGTYTN 301

Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLE 200
           G+   +G+V+    L   +   G     N+  +           +       +V  G+LE
Sbjct: 302 GQEQIQGQVV----LADFNNPNGLTPVSNNAWAATNAAGQPIVGAPTTGTLGSVSGGYLE 357

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
            SN ++  EM  ++   + + S   ++D N       +  I
Sbjct: 358 GSNVDTTAEMVSLMTAQRNYQSNAKVLDANSTMQQALLNAI 398


>gi|119385423|ref|YP_916479.1| hypothetical protein Pden_2696 [Paracoccus denitrificans PD1222]
 gi|119375190|gb|ABL70783.1| protein of unknown function DUF1078 domain protein [Paracoccus
           denitrificans PD1222]
          Length = 446

 Score = 77.6 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 67/165 (40%), Gaps = 11/165 (6%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-QKISFVAS 61
           ++ + G++   A   RL+T++DN++N+ T G++ +   F  +V            + V +
Sbjct: 5   SALSAGVSGLAANSTRLATISDNIANSGTYGYKRVDTSFESMVINQGRGGGLYTANGVRA 64

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALES----------PRGIILTRDGRFKVTDD 111
               +  E G+ + T   LD A+ G     +               +++TR G F+  D 
Sbjct: 65  ATSRIVDERGNLVPTSHPLDIAISGRGMLPVIYSASLDSGTATSSDLVMTRTGSFRTDDQ 124

Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156
           G L + SG   +   A+    IP +      G +  +    +  A
Sbjct: 125 GYLRTDSGLVLMGWPANSDGTIPSQPRDSTTGLQPIMISPSQTAA 169



 Score = 66.4 bits (160), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 29/98 (29%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGI-----SPNIPPTPLEDLSGVTVKRGFLED 201
             +   + +  + L  V    G +  +N        S         D     V     E 
Sbjct: 346 YDTGFTRTLYQVPLVDVPNPNGLIAMDNQTYKISPRSGAFYLWNAGDGPTGAVAGYAREA 405

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           S  +   E+  +I   + + S   +I   ++ + E   
Sbjct: 406 STTDVAAELTDLIQTQRAYTSNAKVIQTVDEMLQETAN 443


>gi|271500066|ref|YP_003333091.1| fagellar hook-basal body protein [Dickeya dadantii Ech586]
 gi|270343621|gb|ACZ76386.1| fagellar hook-basal body protein [Dickeya dadantii Ech586]
          Length = 399

 Score = 77.6 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 77/192 (40%), Gaps = 6/192 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SF+  ++   A    L  + +N++N+ TVGF+   + F+++       +  K++ V    
Sbjct: 2   SFSQAVSGLNAASSNLDVIGNNIANSATVGFKASNISFADMYAGSNVGLGTKVASV---- 57

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  GS  +T   LD A+ G+ ++  L++   ++ +R+G+F +    ++V++ G   
Sbjct: 58  -LQDFGNGSINNTSRALDVAINGNGFYRLLDTNGSVVYSRNGQFTLDSSRNIVNSQGLQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q+          E +   K  +T  + +   S       N+    N  
Sbjct: 117 TGYPATGTPPTIQQGASPVALSIPETTMSAKATSTASIIANLNSSDSTNTWNATDPTNTS 176

Query: 183 PTPLEDLSGVTV 194
                  +  ++
Sbjct: 177 NYKGSITTYDSL 188



 Score = 73.4 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/224 (12%), Positives = 59/224 (26%), Gaps = 14/224 (6%)

Query: 30  DTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAW 89
           +T  ++     +  +  A    +    +   S   Y      S          +      
Sbjct: 174 NTSNYKGSITTYDSLGNAHNFGLYFVKTAANSWDVYAQDTSISGAGFQGPTTLSFNSSGA 233

Query: 90  FALESPRGIIL---------TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF 140
               +P  I +         T    F  T   +  S S K P  D  +            
Sbjct: 234 LTTTTPATISMATLNGSAASTFTLAFTGTVQQNSGSNSTKTPTQDGYAPGELTGYSISDD 293

Query: 141 NVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVK 195
                   + K +V+  + L +    +G   + ++  +                +   + 
Sbjct: 294 GTVVGSYSNSKTQVLGQIALANFANPEGLSPQGDNVWAATSNSGQAVVGLAGSGNLGKLV 353

Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
               E SN +   E+  MI   + + S    I   ++ +   + 
Sbjct: 354 GKATESSNVDMSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 397


>gi|237751360|ref|ZP_04581840.1| flagellar hook protein FlgE [Helicobacter bilis ATCC 43879]
 gi|229372726|gb|EEO23117.1| flagellar hook protein FlgE [Helicobacter bilis ATCC 43879]
          Length = 600

 Score = 77.6 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 23/150 (15%), Positives = 53/150 (35%), Gaps = 22/150 (14%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-------D 53
           M  +    ++     +  L ++++N++N +TVG++    +F  +     + +       +
Sbjct: 1   MNDTMLNAVSGIKTHQFGLDSISNNIANVNTVGYKANDPEFKTLFSRSMDSMNASTVTNN 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF---------------ALESPRGI 98
                V      +  ++G+     ++   A  G  WF                 +     
Sbjct: 61  DFSYGVTGASNNVITKMGNLKKADSDTSVAYTGKGWFVVGKNKEGQFEIGEDNFDVSDEN 120

Query: 99  ILTRDGRFKVTDDGSLVSASGKYPVLDMAS 128
             T++G F +  DG LV++ G Y       
Sbjct: 121 YFTKNGDFTIDSDGYLVNSEGYYLYGVNLG 150



 Score = 74.9 bits (182), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 22/166 (13%), Positives = 48/166 (28%), Gaps = 22/166 (13%)

Query: 90  FALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEIS 149
           F  +    + L+R       D G            D  +       +     +      +
Sbjct: 437 FLGKKSVKLTLSRSTNKVYKDSGV------NDTEQDGKNRGEMSNIRINNEGIISVAFTN 490

Query: 150 QKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS----------------GVT 193
            + + I  +GL      QG  +   +  + N      E                      
Sbjct: 491 GQTEAIGRVGLAMFANDQGLKKVGGNLFALNPSTINGEVTQLSGNPKLVWGEDSNLKQGK 550

Query: 194 VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           V +G++E SN +    +  +I + + ++        ++  + EAI 
Sbjct: 551 VLQGYVETSNVDVADALTNLILMQRGYSMNAKAFTTSDDLIKEAIN 596


>gi|33596140|ref|NP_883783.1| flagellar hook protein FlgE [Bordetella parapertussis 12822]
 gi|33573143|emb|CAE36790.1| flagellar hook protein FlgE [Bordetella parapertussis]
          Length = 473

 Score = 77.6 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 60/168 (35%), Gaps = 8/168 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
            F  GL+   A  Q L  + +N++N+ TVGF++    F++V  +      +    V    
Sbjct: 2   GFGQGLSGLNAASQNLDVIGNNIANSGTVGFKSGAASFADVYAS-----SRVGLGVKVSA 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRG--IILTRDGRFKVTDDGSLVSASGKY 121
                 VG+  +TG E D A++G   F   + +   +  +R+G F V  +  +V+A G  
Sbjct: 57  INQRFTVGNISTTGGEYDMAIDGGKGFFRLTDQSGGVFYSRNGEFMVDKNFYIVNAQGFR 116

Query: 122 PVL-DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
                   V  Q                S  G          V     
Sbjct: 117 LTGYPAGGVGAQPVDLQLPQGNIAPQATSTAGLQTNLNANAKVIDPND 164



 Score = 75.3 bits (183), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 32/98 (32%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLED 201
             + + + I T+ L + +  QG     N+                 T     +    LE 
Sbjct: 374 YTNGETQTIGTLVLANFNNVQGLQPVGNNAWVETSESGQATLGQPGTNGLATIAGQALEA 433

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E+  MI   + + +    I   ++ M   + 
Sbjct: 434 SNVDMSRELVNMIVAQRTYQANAQTIKTQDEVMQVLMN 471


>gi|300312833|ref|YP_003776925.1| flagellar hook protein [Herbaspirillum seropedicae SmR1]
 gi|300075618|gb|ADJ65017.1| flagellar hook protein [Herbaspirillum seropedicae SmR1]
          Length = 420

 Score = 77.6 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/129 (24%), Positives = 56/129 (43%), Gaps = 5/129 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID--QKISFVAS 61
           SF  GL+      + L  + +N++N  TVGF+  +V+F++      N          V  
Sbjct: 2   SFQQGLSGLHGASKHLDVIGNNVANASTVGFKQGQVQFADAYANSMNRSGNSPVGIGVTV 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALE---SPRGIILTRDGRFKVTDDGSLVSAS 118
                +   G+  +T   LD A+ GD +F +    + +     R+G+F++  DG L++ S
Sbjct: 62  ANVSQAFTQGNIATTNNALDVAINGDGFFRMAASLTDQSPRYGRNGQFQLNKDGYLINPS 121

Query: 119 GKYPVLDMA 127
                L   
Sbjct: 122 MNGAYLTGY 130



 Score = 69.5 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 13/123 (10%), Positives = 34/123 (27%), Gaps = 5/123 (4%)

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
              D                       +Q+ +V+  + L +     G     N+    + 
Sbjct: 296 QSQDGMPPGTLSSFSIGKDGSIIGAYSNQQTRVMGQIVLVNFANPHGLQPIGNNLYQASE 355

Query: 182 PPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                        +   ++   +E SN +   E+  MI   + + + +  I   +  +  
Sbjct: 356 AAGSALVGTPTTGAFGALQGRAVEQSNVDLTAELVNMIVAQRVYQANSQTIKVQDTVLQT 415

Query: 237 AIR 239
            + 
Sbjct: 416 LVS 418


>gi|217327976|ref|ZP_03444058.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. TW14588]
 gi|217318403|gb|EEC26829.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. TW14588]
          Length = 372

 Score = 77.6 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 72/195 (36%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ + V+  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNQVNMQGLQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q+                K   T  +     S   +   N+  + N  
Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPSVNAFDASNAD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 177 SYNKKGSVTVFDSQG 191


>gi|315125984|ref|YP_004067987.1| flagellar hook protein FlgE [Pseudoalteromonas sp. SM9913]
 gi|315014498|gb|ADT67836.1| flagellar hook protein FlgE [Pseudoalteromonas sp. SM9913]
          Length = 442

 Score = 77.6 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 75/189 (39%), Gaps = 8/189 (4%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
            + FNIGL+   + +  L   ++N++N+ T G++    +F+ V      +  Q+     +
Sbjct: 1   MSMFNIGLSGLKSTQAGLEVTSNNIANSGTAGYKNNTAEFAAVY-----NGSQRGGVKVA 55

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
             +      G  + TG  LD A++G  +FA+        T+ G+F++ +D ++V+A+G  
Sbjct: 56  NVKEDFVTGGEIVRTGNALDIAIDGQGFFAISENGRTAYTQAGQFQLDNDLNVVNANGGK 115

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
                 S    +   D     G   ++  +   I      +++ +       +    P  
Sbjct: 116 LQGFGVSQ---VDGGDPTIVPGVLTDLKIEASNIEAQASTNINFNGNLSSSSDVIAYPTA 172

Query: 182 PPTPLEDLS 190
           P        
Sbjct: 173 PAVFDPKDG 181



 Score = 59.5 bits (142), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 14/95 (14%), Positives = 29/95 (30%), Gaps = 5/95 (5%)

Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLEDSNAN 205
           + K+   + L S     G  +  N+                E  S   +  G    SN +
Sbjct: 347 ESKLQGQVVLASFANVDGLEQGSNTVWYQTEESGSALYGEPESGSLGKLLSGSFMGSNVD 406

Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
              ++  ++   Q + +    I   ++ M     N
Sbjct: 407 ISEQLVGLMSFQQNYQANAKTISSADEMMQILFSN 441


>gi|307131609|ref|YP_003883625.1| flagellar hook protein flgE [Dickeya dadantii 3937]
 gi|306529138|gb|ADM99068.1| Flagellar hook protein flgE [Dickeya dadantii 3937]
          Length = 399

 Score = 77.6 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 75/192 (39%), Gaps = 6/192 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SF+  ++   A    L  + +N++N+ TVGF+   + F+++       +  +++ V    
Sbjct: 2   SFSQAVSGLNAASNNLDVIGNNIANSATVGFKASNISFADMYAGSNVGLGTRVASV---- 57

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  GS  ST   LD A+ G+ ++  L S   ++ +R+G+F +    ++V+A G   
Sbjct: 58  -LQDFSNGSITSTSRSLDVAINGNGFYRLLNSNGSVVYSRNGQFTLDSSRNIVNAQGLQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q+          E +   K  +T  + +   S       +     N  
Sbjct: 117 TGYPATGTPPAIQQGADPVGLSIPETTMSAKATSTASIIASLNSSDSTNTWDPTDPTNTS 176

Query: 183 PTPLEDLSGVTV 194
                  +  ++
Sbjct: 177 NYKGSITTYDSL 188



 Score = 73.0 bits (177), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 61/224 (27%), Gaps = 14/224 (6%)

Query: 30  DTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAW 89
           +T  ++     +  +  A    +    S   S   Y      +          +      
Sbjct: 174 NTSNYKGSITTYDSLGNAHNFALYFVKSASNSWDVYAQDTSITGAGFQGPTTLSFNTSGA 233

Query: 90  FALESPRGIIL---------TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF 140
               +P  I +         T +  F  T   +  S S K P  D               
Sbjct: 234 LTTTTPATISMATLNGSAASTFNLSFTGTVQQNSGSNSTKTPTQDGYEPGELTGYSISED 293

Query: 141 NVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFL- 199
                   + K +++  + L +    +G   + ++  +           S  T   G L 
Sbjct: 294 GSVVGSYSNNKTQLLGQIALANFANPEGLSPQGDNVWAATGNSGQAVVGSAGTGNLGKLV 353

Query: 200 ----EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
               E SN +   E+  MI   + + S    I   ++ +   + 
Sbjct: 354 GKATESSNVDMSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 397


>gi|222147589|ref|YP_002548546.1| flagellar hook protein FlgE [Agrobacterium vitis S4]
 gi|221734577|gb|ACM35540.1| flagellar hook protein [Agrobacterium vitis S4]
          Length = 418

 Score = 77.6 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/125 (29%), Positives = 63/125 (50%), Gaps = 1/125 (0%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           S N  ++   A   +LSTV DN++N+DT G++ +   FS +V             V +  
Sbjct: 6   SMNTAVSGLQAQASKLSTVGDNVANSDTTGYKRVSTAFSSLVVGSSGSGTYNSGGVQTTT 65

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122
                E GS+ S+ +E D A++GD +F ++     + LTR G FK  D+G +V+++G   
Sbjct: 66  VNSISEEGSYQSSTSETDLAIKGDGYFVVQDEAGSVFLTRAGDFKADDNGYMVNSAGYTL 125

Query: 123 VLDMA 127
           +    
Sbjct: 126 LGYSY 130



 Score = 66.0 bits (159), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 15/139 (10%), Positives = 34/139 (24%), Gaps = 5/139 (3%)

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
             ++    L SA+     +D                             +  + L +V  
Sbjct: 277 VDMSTMTQLNSANSSEGDVDGNGASAASSVTVNSSGNIVATYQDGSTANLYKVALATVAS 336

Query: 166 SQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
                    +                   S  ++    LE SN +   E+  MI   + +
Sbjct: 337 PDNMKSVNGTAYQVTADAGTVVVGFANTGSFGSINSKTLETSNVDLATELTNMIQSQRSY 396

Query: 221 NSITTLIDENEKSMLEAIR 239
           ++ + +       +   I 
Sbjct: 397 SANSKVFQTAADMLDTLIS 415


>gi|261341494|ref|ZP_05969352.1| flagellar hook protein FlgE [Enterobacter cancerogenus ATCC 35316]
 gi|288316290|gb|EFC55228.1| flagellar hook protein FlgE [Enterobacter cancerogenus ATCC 35316]
          Length = 395

 Score = 77.2 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 66/192 (34%), Gaps = 6/192 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SF+I ++   A+ ++L  +++N++N+ TVGF++ + +F+ +         Q +    +  
Sbjct: 2   SFDIAISGLNAINEQLGAISNNIANSGTVGFKSGRAEFASLYAE-----GQPLGVGVTNV 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122
                + G+  ++ + LD A+ G  +F +         TR G  +   +G+LV+  G Y 
Sbjct: 57  AQSISKNGTVFASASSLDLAINGQGFFVMRDSSGTTAYTRAGYMQTDSNGNLVNNQGMYL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
                     I            G +  K               +               
Sbjct: 117 QGYPVDANGVIQTGTVGNLTISSGSLPAKATSSLDFTANLNANEEKPKTATFDPTDETSY 176

Query: 183 PTPLEDLSGVTV 194
                     ++
Sbjct: 177 NHTYATQVYDSL 188



 Score = 69.9 bits (169), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 22/214 (10%), Positives = 61/214 (28%), Gaps = 14/214 (6%)

Query: 42  SEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101
           ++V  ++  +   K  FV +              +  +       +    L+    + LT
Sbjct: 182 TQVYDSLGREHTLKQYFVKTDDNTWQVHYYMDDKSMGDAKDMTFNEQGILLKPNGAVNLT 241

Query: 102 RDG----RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK---- 153
                     +  + +  +  G    +   +       +     + + G +         
Sbjct: 242 AAIPGADSISLDLNYNGTTQFGSDFSVSKNNGNGYASGERTGQTIDKDGSVYATFSNGER 301

Query: 154 -VIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSM 207
            +   + L +     G   +  +  +           +  T     +    LE SN N  
Sbjct: 302 LLQGQVVLANFSNPNGLSSQNGTTWTQTASSGAPLLGTPGTGLLGALTSNTLEGSNVNLT 361

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
            E+  ++   + + + T +I  N+  M    + +
Sbjct: 362 DELVGLMTAQRNYQANTKVISTNDSMMTALFQAV 395


>gi|148558720|ref|YP_001258004.1| flagellar hook protein FlgE [Brucella ovis ATCC 25840]
 gi|148370005|gb|ABQ62877.1| flagellar hook protein FlgE [Brucella ovis ATCC 25840]
          Length = 377

 Score = 77.2 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/123 (27%), Positives = 54/123 (43%), Gaps = 24/123 (19%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M      G++   A   RLSTVADN++N  TVG++  + +FS +V               
Sbjct: 6   MMR---TGVSGMNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAG--------- 53

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASG 119
                       + S     D A++G+ +F ++ P G    TR G F    +G LV+++G
Sbjct: 54  -----------QYNSGSVLTDLAIDGNGYFVVQGPGGSTYLTRAGSFVPDKNGDLVNSAG 102

Query: 120 KYP 122
            Y 
Sbjct: 103 YYL 105



 Score = 68.7 bits (166), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 22/54 (40%)

Query: 186 LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +      +  G LE+SNA+   E+  MI   + + + + +     + M   + 
Sbjct: 321 PQGDGMGKIMSGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGSELMDVLVN 374


>gi|83309603|ref|YP_419867.1| flagellar hook protein FlgE [Magnetospirillum magneticum AMB-1]
 gi|82944444|dbj|BAE49308.1| Flagellar hook protein FlgE [Magnetospirillum magneticum AMB-1]
          Length = 843

 Score = 77.2 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/192 (19%), Positives = 63/192 (32%), Gaps = 9/192 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +   G++   +    +  ++DN++N +T G++  KV F  +V    +        V S  
Sbjct: 6   ALFSGVSGLASQSSAMGAISDNITNVNTTGYKGAKVNFQTLVTKQVSLTTYSPGGVQSKP 65

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGI--------ILTRDGRFKVTDDGSLV 115
                  G   +T    D AL G   F + +              TR G FKV  +G L 
Sbjct: 66  RAAIDSQGLLQATTNSTDLALSGQGMFVVNTDPDPATSGNGMFAYTRAGSFKVDKEGYLQ 125

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
           + SG Y                +   +   G    K    A    + V+ +    +   S
Sbjct: 126 NVSGFYVQGWPLQPTNN-NVLAKPTELTVDGNTYMKAYKQADGTFHYVNQNIINPQETKS 184

Query: 176 GISPNIPPTPLE 187
                I  T  +
Sbjct: 185 LNLKTIGGTADQ 196



 Score = 68.7 bits (166), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 10/92 (10%), Positives = 30/92 (32%), Gaps = 5/92 (5%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLEDSNANSM 207
           + +  + + +     G      +                 +    +V+   LE S  +  
Sbjct: 749 RPVFQIPVATFTNPNGLESLTGNSWIETNTSGSYTLRQANNAGAGSVQSASLEASTVDIG 808

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            E   MI   + +++   +I   ++ + E ++
Sbjct: 809 SEFTTMIITQRAYSAAAKIITTADQMLDELVQ 840


>gi|54297182|ref|YP_123551.1| flagellar hook protein FlgE [Legionella pneumophila str. Paris]
 gi|53750967|emb|CAH12378.1| Flagellar hook protein FlgE [Legionella pneumophila str. Paris]
          Length = 437

 Score = 77.2 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 60/122 (49%), Gaps = 2/122 (1%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV--GAIKNDIDQKISFVASG 62
           FN  L+   A  + L  + +N++N+ T+GF+  + +F+++    A  +  +     V   
Sbjct: 3   FNTALSGIQASTRDLEVIGNNIANSATIGFKGSRAEFADIYSSSAYGSGGNAVGGGVKLS 62

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
           + + S   G+  ++   LD A+ G  +F L      + TR G+FK+ ++  +V+A+ +  
Sbjct: 63  RVHQSFATGTLSTSNNTLDLAVNGSGFFILSDQGAKVYTRAGQFKLNNENYIVNANNQRL 122

Query: 123 VL 124
             
Sbjct: 123 TG 124



 Score = 68.4 bits (165), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 12/90 (13%), Positives = 28/90 (31%), Gaps = 5/90 (5%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYE 209
           +  + L +    +      N+  +           +  +     +  G LE+SN +   E
Sbjct: 346 MGQIQLANFADPESLQNLGNTNWAETTSSGQPLISAPGSGGLGLINSGRLEESNVDLTSE 405

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +  +I   + F +    I   +      I 
Sbjct: 406 LVNLISAQRNFQANAQTIRTGDAITQTIIN 435


>gi|149178721|ref|ZP_01857304.1| flagellar hook protein FlgE [Planctomyces maris DSM 8797]
 gi|148842419|gb|EDL56799.1| flagellar hook protein FlgE [Planctomyces maris DSM 8797]
          Length = 563

 Score = 77.2 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 57/168 (33%), Gaps = 12/168 (7%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------KN 50
           ++ N  L      E  +  + +N++N  T GF+   V F+  +                 
Sbjct: 5   SALNTSLGGLSLNETSIDVLGNNIANAGTNGFKASNVLFTTQLSRTLSVGSRPTTSNGGT 64

Query: 51  DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTD 110
           +  Q      S         GS  ++ +  D A++GD +F L+ P G + +R+G F++  
Sbjct: 65  NPRQVGLGALSASIRKDFTQGSVTNSTSPSDLAIQGDGFFILDGPDGQVYSRNGNFELNS 124

Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158
              L + SG             +            G+++         
Sbjct: 125 QSLLTNQSGFKVQGYGVDEDFNLVTTTLTDIEIPLGDLNVAQATQNVQ 172



 Score = 55.6 bits (132), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 33/91 (36%), Gaps = 5/91 (5%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSM 207
           + +  + L      QG +   NS     +   P       +    T++ G +E SN +  
Sbjct: 469 RTLGQITLSRFSNPQGLLEFGNSTFQEGVSSGPPFLVTPGNFGAGTIRAGSIELSNTDVG 528

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
             +  +I  +  +     +I   ++ + E +
Sbjct: 529 RSLVDLIVASTNYRGNARVISSVQQLVDELL 559


>gi|118589967|ref|ZP_01547371.1| flagellar basal body FlaE [Stappia aggregata IAM 12614]
 gi|118437464|gb|EAV44101.1| flagellar basal body FlaE [Stappia aggregata IAM 12614]
          Length = 424

 Score = 77.2 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/123 (27%), Positives = 60/123 (48%), Gaps = 2/123 (1%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
              G++   A   +L TVA+N+ N+ T G++  K +FS +V +           V +  +
Sbjct: 7   MRSGVSGMNAQSSKLGTVAENIMNSSTTGYKRAKSEFSSLVVSQGAGSFNSG-GVEAHTQ 65

Query: 65  YLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGKYPV 123
           Y   + G+   T ++LD A++G+ +F + +  G   LTR G F    DG L++ +G Y  
Sbjct: 66  YEITKKGNLSFTTSKLDLAIDGNGFFVVGNEAGESFLTRAGHFVPDGDGYLLNTAGYYLQ 125

Query: 124 LDM 126
              
Sbjct: 126 GYP 128



 Score = 62.2 bits (149), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 16/124 (12%), Positives = 37/124 (29%), Gaps = 5/124 (4%)

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
               D  +       +            +   + I  + L +V        R  +  S +
Sbjct: 298 NVDADGNAPSAVKNVEFADDGTLFAVYANGDRRAIYKIPLANVPSPDRLSNRSGNVYSTS 357

Query: 181 IPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
                +      +     +K G LEDSN +   E+  MI   + + + + +       + 
Sbjct: 358 FDSGDVRVGFAGEGGMGAIKVGGLEDSNVDLGNELTSMIESQRTYTANSQVFKAGSDLLE 417

Query: 236 EAIR 239
           + + 
Sbjct: 418 QLVN 421


>gi|87307400|ref|ZP_01089545.1| flagellar hook protein FlgE [Blastopirellula marina DSM 3645]
 gi|87290140|gb|EAQ82029.1| flagellar hook protein FlgE [Blastopirellula marina DSM 3645]
          Length = 929

 Score = 77.2 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 59/171 (34%), Gaps = 13/171 (7%)

Query: 12  QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN------------DIDQKISFV 59
             A E ++  + +N++N+ TVGF+     F+      +             +  Q    V
Sbjct: 1   MTAAETQIDVLGNNLANSQTVGFKASDALFANQFLQTRGLGSKPSETDGGTNPRQVGLGV 60

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLVSAS 118
              +   +   G+   +    D A++GD +F ++   G    TR+G FK   +  LV+  
Sbjct: 61  MVAEITPNFTQGTIEVSSNPSDLAIQGDGFFIVQGNNGERLYTRNGIFKTNSNNELVTIG 120

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169
           G+  +         I +   +      G  +            ++  +   
Sbjct: 121 GERVLGFGIDENFNIQETQLVPLTIPLGAAAVAKATENVYLEGTLPATGDL 171



 Score = 53.3 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 11/90 (12%), Positives = 31/90 (34%), Gaps = 5/90 (5%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYE 209
           +  + L       G  +R N+  +  +                ++  G +E SN +    
Sbjct: 837 LGMIQLARFANPSGLEQRGNNLFAAGVNSGLPVQGDAGEEGIGSIIAGAVELSNTDIGGN 896

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +  +I  + ++   + +I   ++   E + 
Sbjct: 897 LIDLILASTQYRGSSRIITTAQQLFDELLN 926


>gi|170742312|ref|YP_001770967.1| flagellar basal body FlaE domain-containing protein
           [Methylobacterium sp. 4-46]
 gi|168196586|gb|ACA18533.1| flagellar basal body FlaE domain protein [Methylobacterium sp.
           4-46]
          Length = 456

 Score = 77.2 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/173 (22%), Positives = 71/173 (41%), Gaps = 14/173 (8%)

Query: 1   MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
           M   ++    ++   A    L+ ++ N++N  T G+R I   F++++    ND     S 
Sbjct: 1   MDVFSAMQTAVSGLQAQAFSLNNISGNIANAQTTGYRRIDTTFADLLAEQPNDRQTSGS- 59

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-----------ILTRDGRFK 107
           VA+  ++ +   G+  STG   + AL G  +F + +P              + TR G F 
Sbjct: 60  VAASSQFTNTLQGNIASTGITTNMALNGGGFFVVRTPSATSGGQPSFTSQDLYTRRGDFA 119

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           V  DG LV+ +G Y V             + +  +G +   +Q    I+    
Sbjct: 120 VDKDGYLVNGAGSYLVGQSLDPRTGQATGNGVIRIGNQALPAQATTTISYAAN 172



 Score = 68.4 bits (165), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 25/201 (12%), Positives = 63/201 (31%), Gaps = 4/201 (1%)

Query: 44  VVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103
           +  A +N  D   +   +     +      ++T       +       +      + T  
Sbjct: 258 LFYAKQNGTDSTATAWTNAGTAFTFNASGQLTTPAGGSATIPNVTVDGVPLGTLTLNTAS 317

Query: 104 GRF-KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162
           G   +    G  V+ +        +     +               +     +A +G+  
Sbjct: 318 GGLTQYGAAGGQVTTNTLQQNGSASGTLRSLAVT--SDGRVTGTYSNGTTATLAQVGIAR 375

Query: 163 VDMSQGFVRRENSGISPNI-PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221
            +             +  +    P+  L+G TV  G +E SN ++  E  ++I   Q ++
Sbjct: 376 FNAPDALKAESLGNYAQTVESGGPVSGLAGTTVVGGNVEQSNTDTANEFSKLIITQQAYS 435

Query: 222 SITTLIDENEKSMLEAIRNIA 242
           + T ++   ++ M + +  I 
Sbjct: 436 ANTRVMSTAQQMMSDLVNIIR 456


>gi|323967017|gb|EGB62443.1| fagellar hook-basal body protein [Escherichia coli M863]
 gi|327253475|gb|EGE65113.1| flagellar hook protein flgE [Escherichia coli STEC_7v]
          Length = 401

 Score = 77.2 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 71/195 (36%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ +LV+  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q+                K   T  +     S   +       + N  
Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPSVKGFDASNAD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 177 SYNKKGSVTVFDSQG 191



 Score = 73.7 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             +       +  +            +++ +++  + L +   ++G     ++  S    
Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 337

Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                       +  T+  G LE SN +   E+  MI   + + S    I   ++ +   
Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397

Query: 238 IR 239
           + 
Sbjct: 398 VN 399


>gi|73539450|ref|YP_299817.1| flagellar hook protein FlgE [Ralstonia eutropha JMP134]
 gi|72122787|gb|AAZ64973.1| Flagellar basal body rod protein:Protein of unknown function
           DUF1078:Flagellar basal body FlaE [Ralstonia eutropha
           JMP134]
          Length = 417

 Score = 77.2 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/212 (11%), Positives = 60/212 (28%), Gaps = 14/212 (6%)

Query: 42  SEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101
            ++V               +       +    +  G+ +  A + +      SP  I LT
Sbjct: 205 QQLVAYFGKSSSGPTVTGGTDWTMNVTDAAGNVMGGSPITLAFDSNGKLTSTSPATITLT 264

Query: 102 RDGRFKVTDDGSLVSASG----------KYPVLDMASVPIQIPQKDEIFNVGEKGEISQK 151
           +      +D    +  +G            P  D  +    +    E          +++
Sbjct: 265 KTMTNGASDLSMKLDLAGTTQFGSDNDVMSPSQDGYASGALLGFAIEGDGTVRASYSNEQ 324

Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPP----TPLEDLSGVTVKRGFLEDSNANSM 207
            +V+  + L S    +G      +  +               +   +    +E SN +  
Sbjct: 325 TQVLGQVVLASFGNPEGLKPEGGNTWAATGASGEAIVGAPGGARGQLLSSAVEASNVDLS 384

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            E+  +I   + + +    I+   + M   + 
Sbjct: 385 GELVNLIVAQRNYQANAKTIETQNQVMNSLMN 416



 Score = 73.7 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 61/153 (39%), Gaps = 7/153 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
            F  G++   A    L  + +N++N++TVG++    +F++V    K  +   ++ V    
Sbjct: 2   GFGQGVSGINAAAANLDVIGNNIANSNTVGYKASTAQFADVYAGTKIGLGTTVNSV---- 57

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRG--IILTRDGRFKVTDDGSLVSASGKY 121
              S   G+  +T   LD A+   + F         +  +R+G+F  TDDG +V+A G  
Sbjct: 58  -VQSFTQGNIQATNRSLDVAITNGSGFFRLVGTDGSVHFSRNGQFARTDDGRIVNAQGLQ 116

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV 154
                 +          +     +      G +
Sbjct: 117 LTGFPPAGSGGGALPQPLVVSSAQMPPKPTGNI 149


>gi|296283217|ref|ZP_06861215.1| flagellar hook protein FlgE [Citromicrobium bathyomarinum JL354]
          Length = 412

 Score = 77.2 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 13/90 (14%), Positives = 32/90 (35%), Gaps = 5/90 (5%)

Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANS 206
            + +  + + +     G  R   +  + +     +           T+  G LE SN + 
Sbjct: 317 SRPVFQLPMATFANPDGLSRLPGNAYTVSQQSGNVAIGRPGELGSGTISAGTLEASNVDL 376

Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
             E   MI   + +++ + +I   +  + E
Sbjct: 377 AQEFTNMIRFQRAYSASSKIITTVDDMLQE 406



 Score = 64.1 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 50/111 (45%), Gaps = 4/111 (3%)

Query: 19  LSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGT 78
           ++TVADN++N +TVG++  +  F  +V   +         VA+    +  + G   +  +
Sbjct: 1   MATVADNITNINTVGYKGAEADFRTLVTDGRLKSSYSAGGVAAAPRAMISKQGLLQAASS 60

Query: 79  ELDFALEGDAWFALESP----RGIILTRDGRFKVTDDGSLVSASGKYPVLD 125
           + D  ++G  +F   +      GI  TR G F+  + G L +  G +    
Sbjct: 61  QTDLGIDGGGFFVTRTGSGADSGIAFTRAGAFRPDEQGYLRNTGGYFLQGW 111


>gi|145297454|ref|YP_001140295.1| flagellar hook protein FlgE [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142850226|gb|ABO88547.1| lateral flagellar hook protein LfgE [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 397

 Score = 77.2 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 12/144 (8%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SF+IGL+   A+ Q LS +++N++N  T GF++ + +F+ + G   N++ Q         
Sbjct: 2   SFSIGLSGLRAVNQELSVISNNVANASTAGFKSSRAEFAAIYGVEMNNVSQN-------- 53

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G  + TG  LD A+ G  +F L+        TR G F+      L +A+G   
Sbjct: 54  ---FDRNGDVMRTGKGLDLAISGSGFFVLKDSNGQTSYTRAGMFQRDASNYLTTANGTRL 110

Query: 123 VLDMASVPIQIPQKDEIFNVGEKG 146
                +   ++          + G
Sbjct: 111 QGYTTNDAGELQSGVVGDIQVKAG 134



 Score = 67.6 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 10/94 (10%), Positives = 29/94 (30%), Gaps = 5/94 (5%)

Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNAN 205
           +  +   + + +     G ++  N+    +         +  T     +  G  E SN +
Sbjct: 302 QNLLQGQVVMANFTNPNGLIQTNNTTWQQSFSSGQPVLGAPGTGTMGSLTAGAYESSNVD 361

Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              E+  ++   + + +    I   +K       
Sbjct: 362 LTGELVSLMTSQRNYQANAKTISSADKMTQVLFN 395


>gi|51597637|ref|YP_071828.1| flagellar hook protein FlgE [Yersinia pseudotuberculosis IP 32953]
 gi|186896771|ref|YP_001873883.1| flagellar hook protein FlgE [Yersinia pseudotuberculosis PB1/+]
 gi|51590919|emb|CAH22575.1| Putative FlgE-like flagellar hook protein [Yersinia
           pseudotuberculosis IP 32953]
 gi|186699797|gb|ACC90426.1| flagellar basal body FlaE domain protein [Yersinia
           pseudotuberculosis PB1/+]
          Length = 414

 Score = 77.2 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/132 (27%), Positives = 57/132 (43%), Gaps = 6/132 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SF+I   A  A  ++L+T+++N++N+ T GF+  + +FS +         Q +    SG 
Sbjct: 2   SFSIANTALNAHTEQLNTISNNIANSATKGFKASRTEFSSMYAQS-----QPLGVAVSGV 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122
                + G    TG  LD A+ G  +F +         TR G F+   DG LV+  G   
Sbjct: 57  SQNISKDGQKEKTGMGLDLAISGGGFFVVRESSGDKAYTRAGMFRSDVDGYLVNGQGMKL 116

Query: 123 VLDMASVPIQIP 134
               A     I 
Sbjct: 117 QGYPADAAGNIQ 128



 Score = 69.9 bits (169), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 22/140 (15%), Positives = 48/140 (34%), Gaps = 9/140 (6%)

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
                G   + +             +I     ++     GE   +GKV+    L +    
Sbjct: 279 TQLSQGFTTTRNKSDGYTSGVKNGERIESDGSVYATFSNGERMLQGKVV----LANFASP 334

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFN 221
            G V +  +  S +         +  T     ++ G LE+SN +   E+  ++   + + 
Sbjct: 335 NGLVTQNGTSWSESNKSGAALLGTPGTGLLGSLESGALENSNVDITAELVGLMTAQRNYQ 394

Query: 222 SITTLIDENEKSMLEAIRNI 241
           + T +I  N+  M    + +
Sbjct: 395 ASTKIISTNDSMMNALFQVL 414


>gi|251789168|ref|YP_003003889.1| flagellar hook protein FlgE [Dickeya zeae Ech1591]
 gi|247537789|gb|ACT06410.1| flagellar basal body FlaE domain protein [Dickeya zeae Ech1591]
          Length = 405

 Score = 77.2 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 72/192 (37%), Gaps = 6/192 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SF+  ++   A    L  + +N++N+ TVGF+   + F+++       +  +++ V    
Sbjct: 2   SFSQAVSGLNAASNNLDVIGNNIANSATVGFKASNISFADMYAGSNVGLGTRVASV---- 57

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122
                  GS  ST   LD A+ G  ++ L +    ++ +R+G+F +    ++V+A G   
Sbjct: 58  -LQDFTNGSINSTSRALDVAINGSGFYRLLNGNGSVVYSRNGQFTLDSSRNIVNAQGLQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q           E +   K      + +   S       N+    N  
Sbjct: 117 TGFPATGTPPAIQSGADPVGLSIPENTMSAKATNIASIIANLNSSDSTNTWNATDPTNTS 176

Query: 183 PTPLEDLSGVTV 194
                  +  ++
Sbjct: 177 NYKGSITTYDSL 188



 Score = 72.2 bits (175), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 51/192 (26%), Gaps = 5/192 (2%)

Query: 53  DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDG 112
           D  I+              S     T    A+                T    F  +   
Sbjct: 212 DTSITGAGFQGPTRLTFDTSGALVPTPPATAVTPVTLSMASLNGSAASTFTLAFTGSVQQ 271

Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172
           +  S S K P  D                       +++ +++  + L +    +G   +
Sbjct: 272 NSGSNSTKTPTQDGYEPGELTGYSISNDGSVIGSYSNKRTQLLGQIVLANFANPEGLSPQ 331

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFL-----EDSNANSMYEMGQMIHLTQKFNSITTLI 227
            ++  +           S  T   G L     E SN +   E+  MI   + + S    I
Sbjct: 332 GDNVWAATNNSGQAVVGSAGTGNFGNLVGKATESSNVDMSKELVNMIVAQRNYQSNAQTI 391

Query: 228 DENEKSMLEAIR 239
              ++ +   + 
Sbjct: 392 KTQDQILNTLVN 403


>gi|118474252|ref|YP_891218.1| flagellar hook protein [Campylobacter fetus subsp. fetus 82-40]
 gi|118413478|gb|ABK81898.1| flagellar hook protein [Campylobacter fetus subsp. fetus 82-40]
          Length = 546

 Score = 77.2 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 67/167 (40%), Gaps = 7/167 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS--- 57
           M   +  G++   +    +  +++++SN +TVG+++   +F  ++    N          
Sbjct: 1   MMIGYYNGISGIKSGNFGIDVISNDISNINTVGYKSSTAEFKSILYQSLNQTSTSPVTSQ 60

Query: 58  ---FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGS 113
                 S    L+ + GS  +T    D A+ GD +F L    G    TR+G F    +G 
Sbjct: 61  IGLGSTSMATSLNFKPGSLQNTDKVFDLAIVGDGFFGLSGINGEQYFTRNGDFSKDVNGD 120

Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           +V+ +G Y +  MA++       +    +G     + K       G 
Sbjct: 121 IVNRNGLYLLGTMANLNAIALSPNAEQKLGNLMGNNDKQAFTLQTGT 167



 Score = 63.7 bits (153), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 15/93 (16%), Positives = 33/93 (35%), Gaps = 8/93 (8%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPL--EDLSGVTVKRGF------LEDSNANS 206
           +A + LY    +QG  +   +                    V  G       LE SN + 
Sbjct: 451 VAKVALYHFQNNQGLSKSSENTYQTTANSGQPIFYQDQNGNVVYGAAIKNSTLEMSNVDL 510

Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              +  +I + + +++    I  +++ + +AI 
Sbjct: 511 GVSLTDLIIMQKAYDASAKSITTSDQMIQKAIN 543


>gi|157147102|ref|YP_001454421.1| hypothetical protein CKO_02879 [Citrobacter koseri ATCC BAA-895]
 gi|157084307|gb|ABV13985.1| hypothetical protein CKO_02879 [Citrobacter koseri ATCC BAA-895]
          Length = 396

 Score = 77.2 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/147 (23%), Positives = 62/147 (42%), Gaps = 6/147 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SFNI  +   A+ ++L+ +++N++N+ TVGF++ + +FS +         Q +    SG 
Sbjct: 2   SFNIATSGLNAITEQLNAISNNIANSGTVGFKSGRAEFSSLYAE-----SQPLGVGVSGV 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+    +F +         TR G F     G+L++  G Y 
Sbjct: 57  TQSITRGGNISTTGNALDLAISDSGFFMVRDSTGTTAYTRAGYFGTDSSGNLINNLGMYL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEIS 149
                +   +I            G I 
Sbjct: 117 QGYPVNANGEIEVGTIGNLTISSGSIP 143



 Score = 74.9 bits (182), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 15/94 (15%), Positives = 33/94 (35%), Gaps = 5/94 (5%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSM 207
            +   + L +     G   ++ +              +  T     VK G LE SN +  
Sbjct: 303 MLQGQLVLANFANPNGLASKDGTTWVQTASSGAPLTGTPGTGLLGSVKSGALESSNVDLT 362

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
            E+  ++   + + + T +I  N+  M    + +
Sbjct: 363 SELVGLMTAQRNYQANTKVISTNDNMMNALFQAV 396


>gi|304397204|ref|ZP_07379083.1| fagellar hook-basal body protein [Pantoea sp. aB]
 gi|304355353|gb|EFM19721.1| fagellar hook-basal body protein [Pantoea sp. aB]
          Length = 418

 Score = 77.2 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 16/125 (12%), Positives = 39/125 (31%), Gaps = 5/125 (4%)

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
             P  D  +                    +QK +++  + L S    +G   + ++    
Sbjct: 292 GSPTQDGYAPGDLTSYAINNDGTITGSYSNQKTQLLGQIVLSSFSNPEGLQSKGDNVWQA 351

Query: 180 NIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
           +              +  ++  G LE SN +   E+  MI   + + +    I   ++ +
Sbjct: 352 SSASGQAAIGLANTGTFGSLTAGALESSNVDMSKELVNMIVAQRNYQANAQTIKTQDQIL 411

Query: 235 LEAIR 239
              + 
Sbjct: 412 NTLVN 416



 Score = 75.7 bits (184), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 74/195 (37%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SF+  ++   A    L  + +N++N+ T GF++  + F+++       +  K++ V    
Sbjct: 2   SFSQAVSGLGAASSNLDVIGNNIANSATAGFKSSTIAFADMFAGSNVGLGTKVAAV---- 57

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122
              +   G+  +T   LD AL G+ +F +     G+  +R+G+  +  + +LV+  G   
Sbjct: 58  -IQNFNDGATTTTSRGLDVALSGNGFFRMTDSSGGVFYSRNGQLTLDANRNLVNTQGLNV 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               AS      Q                 +   T GL +   S        +  + N  
Sbjct: 117 TGYPASGSPATIQAGANPVALRIPTEQMPARATTTAGLVANLNSTDTTPSVPTFSTANAD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +  + V   +G
Sbjct: 177 SYNKKTTATVFDSQG 191


>gi|301051140|ref|ZP_07197970.1| flagellar hook protein FlgE [Escherichia coli MS 185-1]
 gi|300297161|gb|EFJ53546.1| flagellar hook protein FlgE [Escherichia coli MS 185-1]
          Length = 401

 Score = 77.2 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 73/195 (37%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ +LV+  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q+                K   T  +     S   +   N+  + N  
Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDSLPSVNAFDASNAD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 177 SYNKKGSVTVFDSQG 191



 Score = 73.4 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             +       +  +            +++ +++  + L +   ++G     ++  S    
Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 337

Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                       +  T+  G LE SN +   E+  MI   + + S    I   ++ +   
Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397

Query: 238 IR 239
           + 
Sbjct: 398 VN 399


>gi|123442784|ref|YP_001006761.1| flagellar hook protein FlgE [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|332161322|ref|YP_004297899.1| flagellar hook protein FlgE [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|122089745|emb|CAL12598.1| flagellar hook protein FlgE [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|318605242|emb|CBY26740.1| flagellar hook protein FlgE [Yersinia enterocolitica subsp.
           palearctica Y11]
 gi|325665552|gb|ADZ42196.1| flagellar hook protein FlgE [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330860606|emb|CBX70903.1| flagellar hook protein flgE [Yersinia enterocolitica W22703]
          Length = 419

 Score = 77.2 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 14/144 (9%), Positives = 40/144 (27%), Gaps = 5/144 (3%)

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           T       +   +  + S         +       +            + + +++  + +
Sbjct: 274 TFTLSVAGSKQQNTGTDSIVTQNQTGYAAGEFTGFQINNDGSIVGTYSNSQTQLLGQIVM 333

Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIH 215
            +    +G     ++     +                T+  G LE SN +   E+  MI 
Sbjct: 334 VNFANPEGLSSEGDNVWKETLSSGNPILGTAGSGGFGTLTSGALESSNVDLSKELVNMIV 393

Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239
             + + S    I   ++ +   + 
Sbjct: 394 AQRNYQSNAQTIKTQDQILQTLVN 417



 Score = 73.0 bits (177), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 57/134 (42%), Gaps = 6/134 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
            F+  ++   A    L  + +N++N+ T GF+   V F+++         Q    V    
Sbjct: 2   GFSQAVSGLNAASSNLDVIGNNIANSATSGFKAGSVSFADMFA-----GSQTGMGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +T   LD A+    +F ++    G++  R+G+FK+ ++ ++V+  G   
Sbjct: 57  ITQDFNDGTTTTTNRRLDLAISQSGFFRMQDSSGGVLYARNGQFKLDENRNIVNMQGLSL 116

Query: 123 VLDMASVPIQIPQK 136
               A+      Q+
Sbjct: 117 TGYPATGTPPTVQQ 130


>gi|22126390|ref|NP_669813.1| flagellar hook protein FlgE [Yersinia pestis KIM 10]
 gi|45441409|ref|NP_992948.1| flagellar hook protein FlgE [Yersinia pestis biovar Microtus str.
           91001]
 gi|51596011|ref|YP_070202.1| flagellar hook protein FlgE [Yersinia pseudotuberculosis IP 32953]
 gi|108807173|ref|YP_651089.1| flagellar hook protein FlgE [Yersinia pestis Antiqua]
 gi|108812483|ref|YP_648250.1| flagellar hook protein FlgE [Yersinia pestis Nepal516]
 gi|145598610|ref|YP_001162686.1| flagellar hook protein FlgE [Yersinia pestis Pestoides F]
 gi|149366251|ref|ZP_01888286.1| flagellar hook protein FlgE [Yersinia pestis CA88-4125]
 gi|153950658|ref|YP_001401290.1| flagellar hook protein FlgE [Yersinia pseudotuberculosis IP 31758]
 gi|162421636|ref|YP_001606473.1| flagellar hook protein FlgE [Yersinia pestis Angola]
 gi|165925992|ref|ZP_02221824.1| flagellar hook protein FlgE [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165938693|ref|ZP_02227248.1| flagellar hook protein FlgE [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|166010935|ref|ZP_02231833.1| flagellar hook protein FlgE [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166210871|ref|ZP_02236906.1| flagellar hook protein FlgE [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167401045|ref|ZP_02306548.1| flagellar hook protein FlgE [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167420383|ref|ZP_02312136.1| flagellar hook protein FlgE [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167425748|ref|ZP_02317501.1| flagellar hook protein FlgE [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|170024647|ref|YP_001721152.1| flagellar hook protein FlgE [Yersinia pseudotuberculosis YPIII]
 gi|186895114|ref|YP_001872226.1| flagellar hook protein FlgE [Yersinia pseudotuberculosis PB1/+]
 gi|218928922|ref|YP_002346797.1| flagellar hook protein FlgE [Yersinia pestis CO92]
 gi|229896242|ref|ZP_04511412.1| flagellar hook protein FlgE [Yersinia pestis Pestoides A]
 gi|229897177|ref|ZP_04512333.1| flagellar hook protein FlgE [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229897903|ref|ZP_04513054.1| flagellar hook protein FlgE [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229902865|ref|ZP_04517982.1| flagellar hook protein FlgE [Yersinia pestis Nepal516]
 gi|270486645|ref|ZP_06203719.1| flagellar hook protein FlgE [Yersinia pestis KIM D27]
 gi|294504030|ref|YP_003568092.1| flagellar hook protein [Yersinia pestis Z176003]
 gi|21959376|gb|AAM86064.1|AE013853_12 hook protein [Yersinia pestis KIM 10]
 gi|45436269|gb|AAS61825.1| flagellar hook protein FlgE [Yersinia pestis biovar Microtus str.
           91001]
 gi|51589293|emb|CAH20914.1| flagellar hook protein FlgE [Yersinia pseudotuberculosis IP 32953]
 gi|108776131|gb|ABG18650.1| flagellar hook protein FlgE [Yersinia pestis Nepal516]
 gi|108779086|gb|ABG13144.1| flagellar hook protein FlgE [Yersinia pestis Antiqua]
 gi|115347533|emb|CAL20442.1| flagellar hook protein FlgE [Yersinia pestis CO92]
 gi|145210306|gb|ABP39713.1| flagellar hook protein FlgE [Yersinia pestis Pestoides F]
 gi|149292664|gb|EDM42738.1| flagellar hook protein FlgE [Yersinia pestis CA88-4125]
 gi|152962153|gb|ABS49614.1| flagellar hook protein FlgE [Yersinia pseudotuberculosis IP 31758]
 gi|162354451|gb|ABX88399.1| flagellar hook protein FlgE [Yersinia pestis Angola]
 gi|165913307|gb|EDR31929.1| flagellar hook protein FlgE [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|165922196|gb|EDR39373.1| flagellar hook protein FlgE [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165990279|gb|EDR42580.1| flagellar hook protein FlgE [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166208051|gb|EDR52531.1| flagellar hook protein FlgE [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166962078|gb|EDR58099.1| flagellar hook protein FlgE [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167049434|gb|EDR60842.1| flagellar hook protein FlgE [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167055147|gb|EDR64944.1| flagellar hook protein FlgE [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|169751181|gb|ACA68699.1| flagellar basal body FlaE domain protein [Yersinia
           pseudotuberculosis YPIII]
 gi|186698140|gb|ACC88769.1| flagellar basal body FlaE domain protein [Yersinia
           pseudotuberculosis PB1/+]
 gi|229680312|gb|EEO76411.1| flagellar hook protein FlgE [Yersinia pestis Nepal516]
 gi|229688944|gb|EEO81009.1| flagellar hook protein FlgE [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229693514|gb|EEO83563.1| flagellar hook protein FlgE [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229701165|gb|EEO89194.1| flagellar hook protein FlgE [Yersinia pestis Pestoides A]
 gi|262361784|gb|ACY58505.1| flagellar hook protein [Yersinia pestis D106004]
 gi|262366080|gb|ACY62637.1| flagellar hook protein [Yersinia pestis D182038]
 gi|270335149|gb|EFA45926.1| flagellar hook protein FlgE [Yersinia pestis KIM D27]
 gi|294354489|gb|ADE64830.1| flagellar hook protein [Yersinia pestis Z176003]
 gi|320015467|gb|ADV99038.1| flagellar hook protein FlgE [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 428

 Score = 77.2 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 69/192 (35%), Gaps = 11/192 (5%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
            F+  ++   A    L  + +N++N+ T GF+   V F+++         Q    V    
Sbjct: 2   GFSQAVSGMNAASSNLDVIGNNIANSATSGFKAGSVSFADMFA-----GSQTGMGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +T   LD A+  + +F ++    GI   R+G+FK+ ++ ++V+  G   
Sbjct: 57  ITQDFNDGTATTTNRRLDLAISQNGFFRMQDSSGGIYYARNGQFKLDENRNIVNMQGLNL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+          +        +S    +I+     S +M        +       P
Sbjct: 117 TGYPATGTPP-----TVQQGANPVPLSIPQDMISAKATTSGNMVANLTSTHDVIAEATSP 171

Query: 183 PTPLEDLSGVTV 194
             P    +   V
Sbjct: 172 FDPDNPDTYSFV 183



 Score = 73.7 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 13/123 (10%), Positives = 35/123 (28%), Gaps = 5/123 (4%)

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
                 +       +            +Q+ +++  + + +    +G     ++      
Sbjct: 304 QNQTGYAAGEFTGFQINSDGSVVGTYSNQQTQLLGQIVMVNFSNPEGLSSEGDNVWKETQ 363

Query: 182 PPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                           T+  G LE SN +   E+  MI   + + S    I   ++ +  
Sbjct: 364 SSGNPTLGTAGSGGFGTLTSGALESSNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILQT 423

Query: 237 AIR 239
            + 
Sbjct: 424 LVS 426


>gi|114777402|ref|ZP_01452399.1| hypothetical protein SPV1_13919 [Mariprofundus ferrooxydans PV-1]
 gi|114552184|gb|EAU54686.1| hypothetical protein SPV1_13919 [Mariprofundus ferrooxydans PV-1]
          Length = 467

 Score = 77.2 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 56/133 (42%), Gaps = 6/133 (4%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----DIDQKISF 58
            +   G +   +  + +  V DN++N +++GF++  V F++V+            Q  + 
Sbjct: 5   NALFSGASGLTSFGEAVRVVGDNIANVNSIGFKSQSVSFTDVLSQTIGVSSTGSQQVGNG 64

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP--RGIILTRDGRFKVTDDGSLVS 116
           V  G    ++  GS  +T +  D A+ G+  FAL  P       +R G F++  + +L+ 
Sbjct: 65  VKIGTISRNQMQGSIQNTSSATDMAINGNGLFALRDPATNQTSYSRAGSFQLDKNFNLID 124

Query: 117 ASGKYPVLDMASV 129
             G          
Sbjct: 125 GGGNIVQGYAIDP 137



 Score = 65.7 bits (158), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 10/88 (11%), Positives = 28/88 (31%), Gaps = 5/88 (5%)

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLEDSNANSMYEMG 211
            + L              + +   I           +    T+    LE SN +   E  
Sbjct: 377 QVALAKFPNDAVLNHVGGNLMQETIQSGSPVLEKPGNGGMGTITPYGLEQSNVDLAAEFV 436

Query: 212 QMIHLTQKFNSITTLIDENEKSMLEAIR 239
           ++I + + + + +  I   ++ +   ++
Sbjct: 437 KLIVVQRGYEANSKTILTTDQMLSSLMQ 464


>gi|291519588|emb|CBK74809.1| fagellar hook-basal body proteins [Butyrivibrio fibrisolvens 16/4]
          Length = 582

 Score = 76.8 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 53/143 (37%), Gaps = 16/143 (11%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  S   G+A     + ++  + +N+SN +TV F++    FS+++           +   
Sbjct: 1   MMRSLFSGVAGLKTHQTKMDVIGNNISNVNTVAFKSSATTFSDIMYQTTQQASGATATRG 60

Query: 61  SG-------------KEYLSKEVGSFISTGTELDFALEG---DAWFALESPRGIILTRDG 104
                           +      G+  STG  LD  L       +F + +    + TR G
Sbjct: 61  GTNAKQIGLGVTNGATKVSITSAGAAQSTGDALDIRLTDANSTNFFIVSNGSQNLFTRAG 120

Query: 105 RFKVTDDGSLVSASGKYPVLDMA 127
            F +  +G+L   +  Y V+   
Sbjct: 121 SFYIDGNGNLAMTTTGYLVMGWQ 143



 Score = 71.8 bits (174), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 14/129 (10%), Positives = 38/129 (29%), Gaps = 6/129 (4%)

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
             G     +   +        +          +    ++  + +     + G   + ++ 
Sbjct: 451 PDGSSMRGEGKKLGTMTGLSVQSDGKIFGSYSNGNTVLLGQIAVAQFANASGLEEKGDNC 510

Query: 177 ISPNIPPTPLE------DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
               +     +         G  +  G LE +N +   E   MI   + F + + +I  +
Sbjct: 511 YDTTLNSGEFDGIGIDISADGSAMNTGQLEMANVDLSSEFTDMITTQRGFQANSRIITVS 570

Query: 231 EKSMLEAIR 239
           +  + E I 
Sbjct: 571 DTMLEELIN 579


>gi|258625234|ref|ZP_05720146.1| Flagellar hook protein flgE [Vibrio mimicus VM603]
 gi|258582481|gb|EEW07318.1| Flagellar hook protein flgE [Vibrio mimicus VM603]
          Length = 398

 Score = 76.8 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 53/122 (43%), Gaps = 6/122 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SFNI L+   A  + L+T+++N++N  T GF+  + +F+ V      +  Q      +  
Sbjct: 2   SFNIALSGLDATNKELNTISNNIANASTFGFKGSRTEFAAVY-----NGMQPGGVEVASI 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGKYP 122
                + GS   TG  +D A+ G  +F  +   G  + TR G F    +  +   +G   
Sbjct: 57  SQNFDKNGSITGTGRAMDMAINGSGFFVTKDSMGQLLYTRSGVFNTDKNNFITGNNGAKL 116

Query: 123 VL 124
             
Sbjct: 117 QG 118



 Score = 73.0 bits (177), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 19/134 (14%), Positives = 45/134 (33%), Gaps = 9/134 (6%)

Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172
             VS +            +++     ++   + GE  ++G+V+    L +    QG  + 
Sbjct: 269 FGVSTNNANGYTSGELTGVRVEDNGMVYATYDNGESQRQGQVV----LANFADPQGLSKV 324

Query: 173 ENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
            ++  + +            T     +  G LE SN +   E+  ++   + + +    I
Sbjct: 325 NDTAWTQSFSSGAPIMGIPGTGSLGELAPGSLEGSNVDLTSELVSLMTAQRNYQANAKTI 384

Query: 228 DENEKSMLEAIRNI 241
              +K        I
Sbjct: 385 STGDKLTQALFNAI 398


>gi|258622488|ref|ZP_05717510.1| Flagellar hook protein flgE [Vibrio mimicus VM573]
 gi|262173354|ref|ZP_06041031.1| flagellar hook protein FlgE [Vibrio mimicus MB-451]
 gi|258585188|gb|EEW09915.1| Flagellar hook protein flgE [Vibrio mimicus VM573]
 gi|261890712|gb|EEY36699.1| flagellar hook protein FlgE [Vibrio mimicus MB-451]
          Length = 398

 Score = 76.8 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 53/122 (43%), Gaps = 6/122 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SFNI L+   A  + L+T+++N++N  T GF+  + +F+ V      +  Q      +  
Sbjct: 2   SFNIALSGLDATNKELNTISNNIANASTFGFKGSRTEFAAVY-----NGMQPGGVEVASI 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGKYP 122
                + GS   TG  +D A+ G  +F  +   G  + TR G F    +  +   +G   
Sbjct: 57  SQNFDKNGSITGTGRAMDMAINGSGFFVTKDSMGQLLYTRSGVFNTDKNNFITGNNGAKL 116

Query: 123 VL 124
             
Sbjct: 117 QG 118



 Score = 73.0 bits (177), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 19/134 (14%), Positives = 45/134 (33%), Gaps = 9/134 (6%)

Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172
             VS +            +++     ++   + GE  ++G+V+    L +    QG  + 
Sbjct: 269 FGVSTNNANGYTSGELTGVRVEDNGMVYATYDNGESQRQGQVV----LANFADPQGLSKV 324

Query: 173 ENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
            ++  + +            T     +  G LE SN +   E+  ++   + + +    I
Sbjct: 325 NDTAWTQSFSSGAPIMGIPGTGSLGELAPGSLEGSNVDLTSELVSLMTAQRNYQANAKTI 384

Query: 228 DENEKSMLEAIRNI 241
              +K        I
Sbjct: 385 STGDKLTQALFNAI 398


>gi|238764392|ref|ZP_04625342.1| Flagellar hook protein FlgE [Yersinia kristensenii ATCC 33638]
 gi|238697418|gb|EEP90185.1| Flagellar hook protein FlgE [Yersinia kristensenii ATCC 33638]
          Length = 437

 Score = 76.8 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 15/129 (11%), Positives = 38/129 (29%), Gaps = 5/129 (3%)

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
           + S         +       +            +Q+ +++  + + +    +G     N+
Sbjct: 307 TDSIVTQNQTGYAAGEFTGFQINNDGSVVGTYSNQQTQLLGQIVMVNFANPEGLSSEGNN 366

Query: 176 GISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
                +                T+  G LE SN +   E+  MI   + + S    I   
Sbjct: 367 VWKETLSSGNAILGTAGSGGFGTLTSGALESSNVDLSKELVNMIVAQRNYQSNAQTIKTQ 426

Query: 231 EKSMLEAIR 239
           ++ +   + 
Sbjct: 427 DQILQTLVN 435



 Score = 74.9 bits (182), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 57/134 (42%), Gaps = 6/134 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
            F+  ++   A    L  + +N++N+ T GF+   V F+++         Q    V    
Sbjct: 2   GFSQAVSGLNAASSNLDVIGNNIANSATSGFKAGSVSFADMFA-----GSQTGMGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +T   LD A+  + +F ++    GI   R+G+FK+ ++ ++V+  G   
Sbjct: 57  ITQDFNDGTTTTTNRRLDLAISQNGFFRMQDSTGGIFYARNGQFKLDENRNIVNMQGLNL 116

Query: 123 VLDMASVPIQIPQK 136
               A+      Q+
Sbjct: 117 TGYPATGTPPTVQQ 130


>gi|324007916|gb|EGB77135.1| flagellar hook protein FlgE [Escherichia coli MS 57-2]
          Length = 401

 Score = 76.8 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 73/195 (37%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ +LV+  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q+                K   T  +     S   +   N+  + N  
Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDSLPSVNAFDASNAD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 177 SYNKKGSVTVFDSQG 191



 Score = 73.4 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             +       +  +            +++ +++  + L +   ++G     ++  S    
Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 337

Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                       +  T+  G LE SN +   E+  MI   + + S    I   ++ +   
Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397

Query: 238 IR 239
           + 
Sbjct: 398 VN 399


>gi|188592117|ref|YP_001796715.1| flagellar hook protein flge [Cupriavidus taiwanensis LMG 19424]
 gi|170938491|emb|CAP63478.1| FlgE: Flagellar hook protein [Cupriavidus taiwanensis LMG 19424]
          Length = 414

 Score = 76.8 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/206 (18%), Positives = 71/206 (34%), Gaps = 16/206 (7%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
            F  G++   A    L  + +N++N +TVG++    +F++V         +    V    
Sbjct: 2   GFGQGVSGLNAAASNLDVIGNNIANANTVGYKQSAAQFADVYA-----GTKIGLGVRVNS 56

Query: 64  EYLSKEVGSFISTGTELDFAL-EGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKY 121
              S   G+  ++G  LD A+  G+ +F L SP   +  +R+G+F+  +DG + +  G  
Sbjct: 57  VVQSFNQGNIEASGRSLDVAITNGNGFFRLTSPEGAVYYSRNGQFQRQEDGRITNMQGLQ 116

Query: 122 PVLDMAS---------VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172
                A           P+ I                 +    AT+   +   S G    
Sbjct: 117 VTGYPAGVAGGAGVQPQPLVISNAQMEPRATSSITAKFQLDSRATVPTQAFASSAGSPPT 176

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGF 198
            N               +   +   F
Sbjct: 177 SNMFNYSTAINVYDSLGNKQQLMAYF 202



 Score = 69.9 bits (169), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 20/219 (9%), Positives = 54/219 (24%), Gaps = 14/219 (6%)

Query: 35  RTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES 94
           +   + +   V               +  +    +V      G  +  A +        +
Sbjct: 195 KQQLMAYFAKVADSAVAPVHPTVAGGTDWQMYVTDVNGNAVGGAPVTLAFDNAGALQSPA 254

Query: 95  PRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEI----------FNVGE 144
              + LT+            +  SG         V                         
Sbjct: 255 AGAVTLTQPAVNGAQAMAMKLDLSGTTQFGADNDVKQLSQNGYTSGSLLGFSVNGDGTIT 314

Query: 145 KGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPL----EDLSGVTVKRGFLE 200
               +++ K +  + + +    +G     ++  S               S  T++   +E
Sbjct: 315 GNYSNEQTKPLGQIVMAAFGNVEGLKPEGDNVWSATGSSGQPLLGVAGGSLGTLRSNAVE 374

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            SN +   ++  +I   + + +    I   +  M   + 
Sbjct: 375 ASNVDLSGQLVNLIVAQRNYQANAQTIKAQDTVMQTLVN 413


>gi|148358806|ref|YP_001250013.1| flagellar hook protein FlgE [Legionella pneumophila str. Corby]
 gi|296106851|ref|YP_003618551.1| flagellar hook protein FlgE [Legionella pneumophila 2300/99 Alcoy]
 gi|148280579|gb|ABQ54667.1| flagellar hook protein FlgE [Legionella pneumophila str. Corby]
 gi|295648752|gb|ADG24599.1| flagellar hook protein FlgE [Legionella pneumophila 2300/99 Alcoy]
          Length = 437

 Score = 76.8 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 60/122 (49%), Gaps = 2/122 (1%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV--GAIKNDIDQKISFVASG 62
           FN  L+   A  + L  + +N++N+ T+GF+  + +F+++    A  +  +     V   
Sbjct: 3   FNTALSGIQASTRDLEVIGNNIANSATIGFKGSRAEFADIYSSSAYGSGGNAVGGGVKLS 62

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
           + + S   G+  ++   LD A+ G  +F L      I TR G+FK+ ++  +V+A+ +  
Sbjct: 63  RVHQSFATGTLSTSNNTLDLAVNGSGFFILSDQGAKIYTRAGQFKLNNENYIVNANNQRL 122

Query: 123 VL 124
             
Sbjct: 123 TG 124



 Score = 66.4 bits (160), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 13/98 (13%), Positives = 31/98 (31%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLED 201
             + +   +  + L +    +      N+  +           +  +     V  G LE+
Sbjct: 338 YTNGQSLAMGQIQLANFADPESLQNIGNTSWAETTSSGQPLVSAPGSGGLGLVNSGRLEE 397

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E+ ++I   + F +    I   +      I 
Sbjct: 398 SNVDLTGELVKLISAQRNFQANAQTIRTGDAITQTIIN 435


>gi|315497625|ref|YP_004086429.1| fagellar hook-basal body protein [Asticcacaulis excentricus CB 48]
 gi|315415637|gb|ADU12278.1| fagellar hook-basal body protein [Asticcacaulis excentricus CB 48]
          Length = 472

 Score = 76.8 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 55/132 (41%), Gaps = 6/132 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           S   G+A   A    LS +++N++N+ T  ++ ++  F  +V A           V S  
Sbjct: 6   SMQAGVAGLAANSNALSAISNNIANSTTTAYKRVRTDFQSIVTASSTPTGYNAGGVISTT 65

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGI------ILTRDGRFKVTDDGSLVSA 117
            ++   +G+     ++LD  ++G  +F              + TRDG F   +DG L +A
Sbjct: 66  RHMISTLGTLQKASSQLDLGIDGQGFFITTQKSEPGAEDARLFTRDGSFFADEDGYLRNA 125

Query: 118 SGKYPVLDMASV 129
           S  Y      + 
Sbjct: 126 SNLYLQGWPITA 137



 Score = 74.1 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 13/90 (14%), Positives = 32/90 (35%), Gaps = 5/90 (5%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMYE 209
           IA + L +   + G      +  + +    P             +  G LE S+ +   E
Sbjct: 380 IAQLALATFVNADGLTPVSGNAYTVSNDSGPLTLKVPGVSGAGLLGVGTLEASDVDLSEE 439

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              +I   + +++ +  I   ++ + E + 
Sbjct: 440 FTNLIVTQRAYSANSRTITTADEMLQELLN 469


>gi|323976551|gb|EGB71639.1| fagellar hook-basal body protein [Escherichia coli TW10509]
          Length = 401

 Score = 76.8 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 72/195 (36%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ +LV+  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q+                K   T  +     S   +    +  + N  
Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPSVKAFDASNAD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 177 SYNKKGSVTVFDSQG 191



 Score = 73.7 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             +       +  +            +++ +++  + L +   ++G     ++  S    
Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 337

Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                       +  T+  G LE SN +   E+  MI   + + S    I   ++ +   
Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397

Query: 238 IR 239
           + 
Sbjct: 398 VN 399


>gi|300024588|ref|YP_003757199.1| flagellar hook-basal body protein [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299526409|gb|ADJ24878.1| flagellar hook-basal body protein [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 417

 Score = 76.8 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 52/122 (42%), Gaps = 1/122 (0%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
               ++       R+ TVADN++N +T G++    +F+ +V    +        V++   
Sbjct: 7   MTTSISGMAVQSDRMGTVADNIANVNTTGYKEASAEFATLVAE-GHVASYVPGSVSTIAR 65

Query: 65  YLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVL 124
                 G    T +  D A+ G+ +F ++SP G          ++ +G LV+A+G   + 
Sbjct: 66  RAVTHQGDLSYTNSPTDLAVSGNGFFMVQSPSGTPYLTRAGSFISTNGELVNAAGFTLLG 125

Query: 125 DM 126
             
Sbjct: 126 YD 127



 Score = 63.0 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 10/83 (12%), Positives = 27/83 (32%), Gaps = 5/83 (6%)

Query: 162 SVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
           +V           +  + N     L+       S   +  G LE S+ +   E+  M+  
Sbjct: 332 NVASPDNLTAISGNVFATNKESGDLQLGTANSGSLGKIVSGALEKSSVDLASELTTMVEA 391

Query: 217 TQKFNSITTLIDENEKSMLEAIR 239
            + + + + +     + +   + 
Sbjct: 392 QRSYTANSKVFQTGTELLDVLVN 414


>gi|92116886|ref|YP_576615.1| flagellar basal body FlaE [Nitrobacter hamburgensis X14]
 gi|91799780|gb|ABE62155.1| flagellar basal body FlaE [Nitrobacter hamburgensis X14]
          Length = 615

 Score = 76.8 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 56/139 (40%), Gaps = 11/139 (7%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           + N  +    A    L  ++ N++N  T G++ I   FS+++        Q    V +  
Sbjct: 6   ALNTSVGGLQAQSFALQNISGNIANAQTTGYKGITTAFSDLIPDSTAPNRQVAGGVTAYA 65

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRG-----------IILTRDGRFKVTDDG 112
                  G+  ++      A+ GD +F +++P G              TR G F+V  +G
Sbjct: 66  TATISSQGTVSASTVGTYMAITGDGFFNVQAPTGRVDNQPQFSGVTYYTRRGDFQVNANG 125

Query: 113 SLVSASGKYPVLDMASVPI 131
           +LV+++G Y +        
Sbjct: 126 NLVNSAGYYLMGVPVDPKT 144



 Score = 68.0 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 12/88 (13%), Positives = 31/88 (35%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMI 214
           +A + L   + +      +    +      P    +   +    LE SN +   E  ++I
Sbjct: 528 LAKVSLSHFNGTNYLKALDGGAYAVTDESGPAIAGAAGHINGSSLEGSNTDIADEFTKLI 587

Query: 215 HLTQKFNSITTLIDENEKSMLEAIRNIA 242
              Q +++ T +I      + + +  + 
Sbjct: 588 VTQQAYSANTKVITTANSMVQDLLNVLR 615


>gi|213616339|ref|ZP_03372165.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
          Length = 187

 Score = 76.8 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 67/182 (36%), Gaps = 6/182 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SF+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   SFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ +LV+  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGMQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q+                K   T  +     S   V  +      +  
Sbjct: 117 TGYPATGTPPTIQQGANPAPITIPNTLMAAKSTTTASMQINLNSTDPVPSKTPFSVSDAD 176

Query: 183 PT 184
             
Sbjct: 177 SY 178


>gi|187478185|ref|YP_786209.1| flagellar hook protein [Bordetella avium 197N]
 gi|115422771|emb|CAJ49299.1| flagellar hook protein [Bordetella avium 197N]
          Length = 406

 Score = 76.8 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 62/195 (31%), Gaps = 7/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
            F  GL+   A  Q L  + +N++N+ T+GF++    F++V         +    V    
Sbjct: 2   GFGQGLSGLQAASQNLDVIGNNIANSGTIGFKSGSTSFADVYAN-----SRVGLGVKVAA 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESP--RGIILTRDGRFKVTDDGSLVSASGKY 121
                  G+   TG E D A++G   F   +     I+ TR G F +  +  + +A G  
Sbjct: 57  VNQRFTAGTVSGTGGEYDIAIDGAKGFFRVTDASDNIVYTRSGEFGIDKNFFITNAMGYR 116

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
                           ++       + +    +   +   +  +         +  +   
Sbjct: 117 LTGYPVGGIGTNLVPLQVPQANIAPQETNAASIQTNLNANAKIVPAAPAFDPANQDTYTD 176

Query: 182 PPTPLEDLSGVTVKR 196
                   S     +
Sbjct: 177 LVPTTIYDSLGNSHQ 191



 Score = 73.0 bits (177), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 19/140 (13%), Positives = 37/140 (26%), Gaps = 5/140 (3%)

Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
           R    +     S  G     +  S         E          + + + + T+ L + +
Sbjct: 265 RMNYQNVTHFGSDFGPKVTANGYSSGEFSGISIEKNGTIMAKYTNGESQAVGTIALANFN 324

Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQK 219
              G     +S                 T     +    LE SN     E+  MI   + 
Sbjct: 325 NVGGLKPVGDSSWVETGESGQAIMGQPGTNGLATLFGQALEQSNVEMSQELVNMIVAQRT 384

Query: 220 FNSITTLIDENEKSMLEAIR 239
           + +    I   ++ +   I 
Sbjct: 385 YQANAQTIKTQDEVLQVLIN 404


>gi|218700421|ref|YP_002408050.1| flagellar hook protein FlgE [Escherichia coli IAI39]
 gi|218370407|emb|CAR18214.1| flagellar hook protein [Escherichia coli IAI39]
          Length = 400

 Score = 76.8 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 72/195 (36%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ +LV+  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q+                K   T  +     S   +    +  + N  
Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPSVKAFDASNAD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 177 SYNKKGSVTVFDSQG 191



 Score = 72.6 bits (176), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 17/115 (14%), Positives = 37/115 (32%), Gaps = 5/115 (4%)

Query: 130 PIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT----- 184
           P  +       +    G  S +   +  + L +   ++G     ++  S           
Sbjct: 284 PGDLVSYQINDDGTVVGNYSNEQTQLLGIVLANFANNEGLASEGDNVWSATQSSGVALLG 343

Query: 185 PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
                +  T+  G LE SN +   E+  MI   + + S    I   ++ +   + 
Sbjct: 344 TAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 398


>gi|289523565|ref|ZP_06440419.1| flagellar hook protein FlgE [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289503257|gb|EFD24421.1| flagellar hook protein FlgE [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 618

 Score = 76.8 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 63/191 (32%), Gaps = 16/191 (8%)

Query: 19  LSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL------------ 66
           L  V +N++N +T+GF+   V F +++             +                   
Sbjct: 2   LDVVGNNIANVNTMGFKKSTVTFQDLLYETSKGATAPRENIGGVNPMQIGLGTTVAAVET 61

Query: 67  SKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDM 126
               G    TG   D A++GD ++ L      + +R G F +  +G++V +   Y ++  
Sbjct: 62  IHSQGPLQYTGNRTDVAIQGDGYYVLNDGAQNVYSRAGNFVLDGNGNIVQSGTGYTLMGY 121

Query: 127 ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPL 186
              P        +            G+ ++  G   +    G     +S +   +P    
Sbjct: 122 KMSPDPQNPTQYVRGTQLVALNIPVGQKLSAKGTEVL----GLQCNLDSRVDTYLPMGIT 177

Query: 187 EDLSGVTVKRG 197
                 TV  G
Sbjct: 178 NPNFSTTVAIG 188



 Score = 76.4 bits (186), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 15/123 (12%), Positives = 38/123 (30%), Gaps = 5/123 (4%)

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
              D   + +                 + +   + T+ L       G  +   +   P  
Sbjct: 493 YYQDGYQMGVLQDFSIASDGTVMGIYSNGRNSALYTLSLALFSNPSGLEKIGMTAFIPTA 552

Query: 182 PP-----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                     ++    ++  G LE +N +   E  ++I   + F +   +I  +++ + E
Sbjct: 553 NSGLPQVVTPKEGGAGSLAGGNLEMANVDLAEEFSRLIIAQRGFQANARVITTSDQVLDE 612

Query: 237 AIR 239
            I 
Sbjct: 613 LIN 615


>gi|289612840|emb|CBI60006.1| unnamed protein product [Sordaria macrospora]
          Length = 135

 Score = 76.8 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 50/129 (38%), Gaps = 10/129 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M    +   A     + RL   A N++N  T G++  ++ F++ V A             
Sbjct: 3   MTGLVDSATAVMRMAQARLDVAAHNIANVATPGYKR-RIGFADTVAARSE---------V 52

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           +    +     S   TG  LD A+ GD +F +      + TR G+F+   DG+LV+  G 
Sbjct: 53  ALATRIDAAQASLTETGNVLDMAISGDGYFRVRDGERTLYTRQGQFRRDADGALVTPQGY 112

Query: 121 YPVLDMASV 129
                    
Sbjct: 113 VLQQSGGGD 121


>gi|331646334|ref|ZP_08347437.1| flagellar hook protein FlgE [Escherichia coli M605]
 gi|330910890|gb|EGH39400.1| flagellar hook protein FlgE [Escherichia coli AA86]
 gi|331045086|gb|EGI17213.1| flagellar hook protein FlgE [Escherichia coli M605]
          Length = 401

 Score = 76.4 bits (186), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 73/195 (37%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ +LV+  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q+                K   T  +     S   +   N+  + N  
Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQLNLNSSDPLPSVNAFDASNAD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 177 SYNKKGSVTVFDSQG 191



 Score = 72.6 bits (176), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             +       +  +            +++ +++  + L +   ++G     ++  S    
Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 337

Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                       +  T+  G LE SN +   E+  MI   + + S    I   ++ +   
Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397

Query: 238 IR 239
           + 
Sbjct: 398 VN 399


>gi|170683341|ref|YP_001744104.1| flagellar hook protein FlgE [Escherichia coli SMS-3-5]
 gi|300938641|ref|ZP_07153370.1| flagellar hook protein FlgE [Escherichia coli MS 21-1]
 gi|170521059|gb|ACB19237.1| flagellar hook protein FlgE [Escherichia coli SMS-3-5]
 gi|300456426|gb|EFK19919.1| flagellar hook protein FlgE [Escherichia coli MS 21-1]
          Length = 401

 Score = 76.4 bits (186), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 72/195 (36%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ +LV+  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q+                K   T  +     S   +    +  + N  
Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPSVKAFDASNAD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 177 SYNKKGSVTVFDSQG 191



 Score = 73.4 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             +       +  +            +++ +++  + L +   ++G     ++  S    
Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 337

Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                       +  T+  G LE SN +   E+  MI   + + S    I   ++ +   
Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397

Query: 238 IR 239
           + 
Sbjct: 398 VN 399


>gi|118588735|ref|ZP_01546143.1| hypothetical protein SIAM614_18554 [Stappia aggregata IAM 12614]
 gi|118438721|gb|EAV45354.1| hypothetical protein SIAM614_18554 [Stappia aggregata IAM 12614]
          Length = 463

 Score = 76.4 bits (186), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 71/218 (32%), Gaps = 25/218 (11%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA-SG 62
           + N  ++   A  + L  ++ N++N+ T G++ +   FS++V    +   Q++S    + 
Sbjct: 6   AINSAVSGLAAQAKALENISGNVANSQTTGYKRLDTTFSDLVSGGGSKQAQQVSGTTFAT 65

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWF-----------ALESPRGIILTRDGRFKVTDD 111
               +   G   S   +   A+ G  +F           +         TR G F+   +
Sbjct: 66  SRATNTVQGDITSVDVDTYMAINGPGYFVVTKASDVVDGSTTFADETYYTRAGDFERDKE 125

Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171
           G L+++SG Y           +              I  + + +A     +VD      R
Sbjct: 126 GYLINSSGYYLQG------FPLDPNTGNAIGDNPTVIQIENQPLAASATTAVDYQANLPR 179

Query: 172 RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYE 209
              +        +        TV  G     N     E
Sbjct: 180 VPATNDYDGTDESTALL--NATVGAG-----NVAVANE 210



 Score = 66.8 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 12/96 (12%), Positives = 39/96 (40%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANS 206
             + + + +  + L +    Q   R + +  +        +   G  +    +E SNA+ 
Sbjct: 368 YSNNQQRPVYQIPLATFQAEQDLQRVDGAAFAATAGSGDADLSGGGQILAKKVELSNADI 427

Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
             E  ++I   Q +++ + ++   ++ + +A+  + 
Sbjct: 428 ADEFSKLIITQQAYSANSRIVTSADEMLDDALNMVR 463


>gi|281178185|dbj|BAI54515.1| flagellar hook protein FlgE [Escherichia coli SE15]
          Length = 401

 Score = 76.4 bits (186), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 73/195 (37%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ +LV+  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q+                K   T  +     S   +   N+  + N  
Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDSLPSVNAFDASNAD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 177 SYNKKGSVTVFDSQG 191



 Score = 73.0 bits (177), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             +       +  +            +++ +++  + L +   ++G     ++  S    
Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 337

Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                       +  T+  G LE SN +   E+  MI   + + S    I   ++ +   
Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397

Query: 238 IR 239
           + 
Sbjct: 398 VN 399


>gi|26247216|ref|NP_753256.1| flagellar hook protein FlgE [Escherichia coli CFT073]
 gi|227886566|ref|ZP_04004371.1| flagellar hook protein FlgE [Escherichia coli 83972]
 gi|300974380|ref|ZP_07172592.1| flagellar hook protein FlgE [Escherichia coli MS 45-1]
 gi|26107617|gb|AAN79816.1|AE016759_90 Flagellar hook protein flgE [Escherichia coli CFT073]
 gi|227836770|gb|EEJ47236.1| flagellar hook protein FlgE [Escherichia coli 83972]
 gi|300410623|gb|EFJ94161.1| flagellar hook protein FlgE [Escherichia coli MS 45-1]
 gi|307553078|gb|ADN45853.1| flagellar hook protein FlgE [Escherichia coli ABU 83972]
 gi|315291070|gb|EFU50433.1| flagellar hook protein FlgE [Escherichia coli MS 153-1]
          Length = 401

 Score = 76.4 bits (186), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 73/195 (37%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ +LV+  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q+                K   T  +     S   +   N+  + N  
Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDSLPSVNAFDASNAD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 177 SYNKKGSVTVFDSQG 191



 Score = 73.0 bits (177), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             +       +  +            +++ +++  + L +   ++G     ++  S    
Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 337

Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                       +  T+  G LE SN +   E+  MI   + + S    I   ++ +   
Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397

Query: 238 IR 239
           + 
Sbjct: 398 VN 399


>gi|168764488|ref|ZP_02789495.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4501]
 gi|189365520|gb|EDU83936.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4501]
          Length = 401

 Score = 76.4 bits (186), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 72/195 (36%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ + V+  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNQVNMQGLQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q+                K   T  +     S   +   N+  + N  
Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPSVNAFDASNAD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 177 SYNKKGSVTVFDSQG 191



 Score = 72.2 bits (175), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             +       +  +            +++ +++  + L +   ++G     ++  S    
Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 337

Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                       +  T+  G LE SN +   E+  MI   + + S    I   ++ +   
Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397

Query: 238 IR 239
           + 
Sbjct: 398 VN 399


>gi|54294163|ref|YP_126578.1| flagellar hook protein FlgE [Legionella pneumophila str. Lens]
 gi|53753995|emb|CAH15466.1| Flagellar hook protein FlgE [Legionella pneumophila str. Lens]
 gi|307609977|emb|CBW99506.1| flagellar hook protein FlgE [Legionella pneumophila 130b]
          Length = 437

 Score = 76.4 bits (186), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 60/122 (49%), Gaps = 2/122 (1%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV--GAIKNDIDQKISFVASG 62
           FN  L+   A  + L  + +N++N+ T+GF+  + +F+++    A  +  +     V   
Sbjct: 3   FNTALSGIQASTRDLEVIGNNIANSATIGFKGSRAEFADIYSSSAYGSGGNAVGGGVKLS 62

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
           + + S   G+  ++   LD A+ G  +F L      I TR G+FK+ ++  +V+A+ +  
Sbjct: 63  RVHQSFATGTLSTSNNTLDLAVNGSGFFILSDQGAKIYTRAGQFKLNNENYIVNANNQRL 122

Query: 123 VL 124
             
Sbjct: 123 TG 124



 Score = 66.0 bits (159), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 12/98 (12%), Positives = 31/98 (31%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLED 201
             + +   +  + L +    +      N+  +           +  +     +  G LE+
Sbjct: 338 YTNGQSLAMGQIQLANFADPESLQNIGNTSWAETTSSGQPLVSAPGSGGLGLINSGRLEE 397

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E+ ++I   + F +    I   +      I 
Sbjct: 398 SNVDLTGELVKLISAQRNFQANAQTIRTGDAITQTIIN 435


>gi|300722682|ref|YP_003711972.1| flagellar hook protein [Xenorhabdus nematophila ATCC 19061]
 gi|139522504|gb|ABO77656.1| FlgE [Xenorhabdus nematophila]
 gi|297629189|emb|CBJ89785.1| flagellar biosynthesis; hook protein [Xenorhabdus nematophila ATCC
           19061]
          Length = 398

 Score = 76.4 bits (186), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 15/124 (12%), Positives = 40/124 (32%), Gaps = 5/124 (4%)

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
            P  D  +       + +          + + +V+  + L +    +G   + ++  + +
Sbjct: 273 PPKQDGYAAGHFTDYRVDDDGKIYGVYSNDQKQVLGQIVLANFANPEGLAAQGDNVWAES 332

Query: 181 IPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
                         +   +  G LE SN +   E+  MI   + + S    I   ++ + 
Sbjct: 333 GASGSSVIGVAGSGNLGNLISGALEASNVDMSQELVNMIVSQRNYQSNAQTIKTQDQILQ 392

Query: 236 EAIR 239
             + 
Sbjct: 393 TLVS 396



 Score = 74.5 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 57/124 (45%), Gaps = 6/124 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SF+  ++   A    L  + +N+SN+ T GF++    F++V         +    V    
Sbjct: 2   SFSQAVSGLNAAASNLDVIGNNISNSATFGFKSSSAAFADVFS-----GSEVGLGVKVSG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASGKYP 122
              + + GS  +T  +LD A+    +F ++     I+ +R+G+FK+ +D +L++  G   
Sbjct: 57  MVQNFKDGSTTTTNRKLDMAINQGGFFRMQDSNGNILYSRNGQFKMDEDRNLINMQGMKL 116

Query: 123 VLDM 126
               
Sbjct: 117 TGYP 120


>gi|209773380|gb|ACI85002.1| flagellar hook protein FlgE [Escherichia coli]
          Length = 401

 Score = 76.4 bits (186), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 73/195 (37%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ +LV+  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q+                K   T  +     S   +   N+  + N  
Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPSVNAFDASNAD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 177 SYNKKGSVTVFDSQG 191



 Score = 72.6 bits (176), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             +       +  +            +++ +++  + L +   ++G     ++  S    
Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 337

Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                       +  T+  G LE SN +   E+  MI   + + S    I   ++ +   
Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397

Query: 238 IR 239
           + 
Sbjct: 398 VN 399


>gi|15801193|ref|NP_287210.1| flagellar hook protein FlgE [Escherichia coli O157:H7 EDL933]
 gi|15830708|ref|NP_309481.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. Sakai]
 gi|168747148|ref|ZP_02772170.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4113]
 gi|168758631|ref|ZP_02783638.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4401]
 gi|168767735|ref|ZP_02792742.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4486]
 gi|168773921|ref|ZP_02798928.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4196]
 gi|168783606|ref|ZP_02808613.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4076]
 gi|168790011|ref|ZP_02815018.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC869]
 gi|168802021|ref|ZP_02827028.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC508]
 gi|195935466|ref|ZP_03080848.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4024]
 gi|208809224|ref|ZP_03251561.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4206]
 gi|208814886|ref|ZP_03256065.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4045]
 gi|208822570|ref|ZP_03262889.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4042]
 gi|209395987|ref|YP_002269922.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4115]
 gi|254792458|ref|YP_003077295.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. TW14359]
 gi|261227019|ref|ZP_05941300.1| flagellar hook protein [Escherichia coli O157:H7 str. FRIK2000]
 gi|261256253|ref|ZP_05948786.1| flagellar hook protein [Escherichia coli O157:H7 str. FRIK966]
 gi|291282096|ref|YP_003498914.1| Flagellar hook protein FlgE [Escherichia coli O55:H7 str. CB9615]
 gi|12514614|gb|AAG55822.1|AE005317_11 flagellar biosynthesis, hook protein [Escherichia coli O157:H7 str.
           EDL933]
 gi|13360918|dbj|BAB34877.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. Sakai]
 gi|187770405|gb|EDU34249.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4196]
 gi|188018069|gb|EDU56191.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4113]
 gi|188999079|gb|EDU68065.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4076]
 gi|189354568|gb|EDU72987.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4401]
 gi|189363151|gb|EDU81570.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4486]
 gi|189370482|gb|EDU88898.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC869]
 gi|189375951|gb|EDU94367.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC508]
 gi|208729025|gb|EDZ78626.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4206]
 gi|208731534|gb|EDZ80222.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4045]
 gi|208738055|gb|EDZ85738.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4042]
 gi|209157387|gb|ACI34820.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4115]
 gi|209773378|gb|ACI85001.1| flagellar hook protein FlgE [Escherichia coli]
 gi|209773382|gb|ACI85003.1| flagellar hook protein FlgE [Escherichia coli]
 gi|209773384|gb|ACI85004.1| flagellar hook protein FlgE [Escherichia coli]
 gi|209773386|gb|ACI85005.1| flagellar hook protein FlgE [Escherichia coli]
 gi|254591858|gb|ACT71219.1| flagellar hook protein [Escherichia coli O157:H7 str. TW14359]
 gi|290761969|gb|ADD55930.1| Flagellar hook protein FlgE [Escherichia coli O55:H7 str. CB9615]
 gi|320189759|gb|EFW64415.1| Flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC1212]
 gi|320637527|gb|EFX07327.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. G5101]
 gi|320643088|gb|EFX12289.1| flagellar hook protein FlgE [Escherichia coli O157:H- str. 493-89]
 gi|320648546|gb|EFX17201.1| flagellar hook protein FlgE [Escherichia coli O157:H- str. H 2687]
 gi|320653860|gb|EFX21934.1| flagellar hook protein FlgE [Escherichia coli O55:H7 str. 3256-97
           TW 07815]
 gi|320659340|gb|EFX26909.1| flagellar hook protein FlgE [Escherichia coli O55:H7 str. USDA
           5905]
 gi|320664475|gb|EFX31626.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. LSU-61]
 gi|326339298|gb|EGD63112.1| Flagellar hook protein FlgE [Escherichia coli O157:H7 str. 1125]
 gi|326344741|gb|EGD68489.1| Flagellar hook protein FlgE [Escherichia coli O157:H7 str. 1044]
          Length = 401

 Score = 76.4 bits (186), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 73/195 (37%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ +LV+  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q+                K   T  +     S   +   N+  + N  
Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPSVNAFDASNAD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 177 SYNKKGSVTVFDSQG 191



 Score = 72.6 bits (176), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             +       +  +            +++ +++  + L +   ++G     ++  S    
Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 337

Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                       +  T+  G LE SN +   E+  MI   + + S    I   ++ +   
Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397

Query: 238 IR 239
           + 
Sbjct: 398 VN 399


>gi|149203100|ref|ZP_01880071.1| flagellar hook protein FlgE, putative [Roseovarius sp. TM1035]
 gi|149143646|gb|EDM31682.1| flagellar hook protein FlgE, putative [Roseovarius sp. TM1035]
          Length = 433

 Score = 76.4 bits (186), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 37/165 (22%), Positives = 68/165 (41%), Gaps = 10/165 (6%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
           +S N  +A   A   RL+T++DN++N+ T G+R ++  F  VV A           V +G
Sbjct: 5   SSLNASVAGLNANATRLATISDNIANSSTFGYRRVEADFESVVIA-GRGGSYAAGGVRAG 63

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFAL---------ESPRGIILTRDGRFKVTDDGS 113
            + L  + G+ +S+    D A+    +  +              ++LT  G F+    G 
Sbjct: 64  TQRLIDQGGAIVSSSNPTDLAVRDRGFLPVARVTDLVVGNGDPRMLLTTTGSFRADPQGR 123

Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158
           LV+ SG   +   A+    IP+     + G +       ++    
Sbjct: 124 LVTESGLVLLGWPANPDGTIPEFSRDTSTGLEPVQINVNQLTGEP 168



 Score = 68.0 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 14/123 (11%), Positives = 36/123 (29%), Gaps = 5/123 (4%)

Query: 125 DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP- 183
           D + V        +          +   +++  + L  +    G V  +     P+    
Sbjct: 311 DGSPVGNMTSANVDANGFVRATFDTGVSRIVYQVPLVDLPNPNGMVSMDQQTYLPSTDSG 370

Query: 184 ----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
                         +     ++S  +   E+  MI   + ++S   +I   ++ + E   
Sbjct: 371 SFFLWDAGAGPTGDIVAFARQESATDVAGELTDMIQTQRAYSSNAKVIQTVDEMLQETTN 430

Query: 240 NIA 242
            I 
Sbjct: 431 IIR 433


>gi|331682578|ref|ZP_08383197.1| flagellar hook protein FlgE [Escherichia coli H299]
 gi|331080209|gb|EGI51388.1| flagellar hook protein FlgE [Escherichia coli H299]
          Length = 401

 Score = 76.4 bits (186), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 73/195 (37%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ +LV+  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q+                K   T  +     S   +   N+  + N  
Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPSVNAFDASNAD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 177 SYNKKGSVTVFDSQG 191



 Score = 72.6 bits (176), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             +       +  +            +++ +++  + L +   ++G     ++  S    
Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 337

Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                       +  T+  G LE SN +   E+  MI   + + S    I   ++ +   
Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397

Query: 238 IR 239
           + 
Sbjct: 398 VN 399


>gi|331672596|ref|ZP_08373385.1| flagellar hook protein FlgE [Escherichia coli TA280]
 gi|331070239|gb|EGI41605.1| flagellar hook protein FlgE [Escherichia coli TA280]
          Length = 401

 Score = 76.4 bits (186), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 73/195 (37%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ +LV+  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q+                K   T  +     S   +   N+  + N  
Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPSVNAFDASNAD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 177 SYNKKGSVTVFDSQG 191



 Score = 72.6 bits (176), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             +       +  +            +++ +++  + L +   ++G     ++  S    
Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 337

Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                       +  T+  G LE SN +   E+  MI   + + S    I   ++ +   
Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397

Query: 238 IR 239
           + 
Sbjct: 398 VN 399


>gi|194432446|ref|ZP_03064733.1| flagellar hook protein FlgE [Shigella dysenteriae 1012]
 gi|194419333|gb|EDX35415.1| flagellar hook protein FlgE [Shigella dysenteriae 1012]
 gi|332092817|gb|EGI97885.1| flagellar hook protein flgE [Shigella dysenteriae 155-74]
          Length = 401

 Score = 76.4 bits (186), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 73/195 (37%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ +LV+  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q+                K   T  +     S   +   N+  + N  
Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPSVNAFDASNAD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 177 SYNKKGSVTVFDSQG 191



 Score = 73.0 bits (177), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 14/122 (11%), Positives = 40/122 (32%), Gaps = 5/122 (4%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             +       +  +            +++ +++  + L +   ++G   + ++  S    
Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASKGDNVWSATQS 337

Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                       +  T+  G LE SN +   E+  MI   + + S    I   ++ +   
Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397

Query: 238 IR 239
           + 
Sbjct: 398 VN 399


>gi|320179224|gb|EFW54182.1| Flagellar hook protein FlgE [Shigella boydii ATCC 9905]
          Length = 389

 Score = 76.4 bits (186), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 73/195 (37%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ +LV+  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q+                K   T  +     S   +   N+  + N  
Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPSVNAFDASNAD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 177 SYNKKGSVTVFDSQG 191



 Score = 63.0 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 14/112 (12%), Positives = 35/112 (31%), Gaps = 5/112 (4%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             +       +  +            +++ +++  + L +   ++G     ++  S    
Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 337

Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
                       +  T+  G LE SN +   E+  MI   + + S    I  
Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKT 389


>gi|293409442|ref|ZP_06653018.1| flgE [Escherichia coli B354]
 gi|291469910|gb|EFF12394.1| flgE [Escherichia coli B354]
          Length = 401

 Score = 76.4 bits (186), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 73/195 (37%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F + +S   +  +R+G+FK+ ++ +LV+  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRMVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q+                K   T  +     S   +   N+  + N  
Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPSVNAFDASNAD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 177 SYNKKGSVTVFDSQG 191



 Score = 72.2 bits (175), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             +       +  +            +++ +++  + L +   ++G     ++  S    
Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 337

Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                       +  T+  G LE SN +   E+  MI   + + S    I   ++ +   
Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397

Query: 238 IR 239
           + 
Sbjct: 398 VN 399


>gi|33601541|ref|NP_889101.1| flagellar hook protein FlgE [Bordetella bronchiseptica RB50]
 gi|33575977|emb|CAE33056.1| flagellar hook protein FlgE [Bordetella bronchiseptica RB50]
          Length = 473

 Score = 76.4 bits (186), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/128 (23%), Positives = 53/128 (41%), Gaps = 7/128 (5%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
            F   L+   A  Q L  + +N++N+ TVGF++    F++V  +      +    V    
Sbjct: 2   GFGQALSGLNAASQNLDVIGNNIANSGTVGFKSGAASFADVYAS-----SRVGLGVKVSA 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRG--IILTRDGRFKVTDDGSLVSASGKY 121
                 VG+   T  E D A++G   F   + +   +  +R+G F V  +  +V+A G  
Sbjct: 57  INQRFTVGNISMTNGEYDMAIDGGKGFFRLTDQSGGVFYSRNGEFMVDKNFYVVNAQGFR 116

Query: 122 PVLDMASV 129
                A  
Sbjct: 117 LTGYPAGA 124



 Score = 75.3 bits (183), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 32/98 (32%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLED 201
             + + + I T+ L + +  QG     N+  +              T     +    LE 
Sbjct: 374 YTNGETQTIGTVVLANFNNVQGLKPVGNNAWAETSESGQATLGQPGTNGLATIVGQALEG 433

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E+  MI   + + +    I    + M   + 
Sbjct: 434 SNVDLSSELVNMIVAQRTYQANAQTIQTQNEVMQVLMN 471


>gi|323190588|gb|EFZ75860.1| flagellar hook protein flgE [Escherichia coli RN587/1]
          Length = 401

 Score = 76.4 bits (186), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 73/195 (37%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   AFSQAVSGLNAAATNLDIIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ +LV+  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q+                K   T  +     S   +   N+  + N  
Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPSVNAFDASNAD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 177 SYNKKGSVTVFDSQG 191



 Score = 73.4 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             +       +  +            +++ +++  + L +   ++G     ++  S    
Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 337

Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                       +  T+  G LE SN +   E+  MI   + + S    I   ++ +   
Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397

Query: 238 IR 239
           + 
Sbjct: 398 VN 399


>gi|83576781|gb|ABC23332.1| conserved hypothetical protein [Rhodospirillum rubrum ATCC 11170]
          Length = 472

 Score = 76.4 bits (186), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 53/124 (42%), Gaps = 3/124 (2%)

Query: 6   NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65
           N+ ++A  A    +S +++N++N+ T+G++T    F  +V    +  +   + V +    
Sbjct: 21  NVAVSAMNAQSSSVSAISNNLANSSTIGYKTSNASFYSLVTGTGSTSNFTGAGVVASATQ 80

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALES---PRGIILTRDGRFKVTDDGSLVSASGKYP 122
                G  + T    D A++G   F +        +  TR G F    DG LV+++  Y 
Sbjct: 81  NVINQGVIVGTQNVTDLAVDGKGMFIVTDRSGSNELYYTRAGDFYPNADGDLVNSNNYYL 140

Query: 123 VLDM 126
               
Sbjct: 141 QGYP 144


>gi|315296707|gb|EFU56002.1| flagellar hook protein FlgE [Escherichia coli MS 16-3]
 gi|320196442|gb|EFW71065.1| Flagellar hook protein FlgE [Escherichia coli WV_060327]
          Length = 401

 Score = 76.4 bits (186), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 73/195 (37%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ +LV+  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q+                K   T  +     S   +   N+  + N  
Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPSVNTFDASNAD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 177 SYNKKGSVTVFDSQG 191



 Score = 72.2 bits (175), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             +       +  +            +++ +++  + L +   ++G     ++  S    
Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 337

Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                       +  T+  G LE SN +   E+  MI   + + S    I   ++ +   
Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397

Query: 238 IR 239
           + 
Sbjct: 398 VN 399


>gi|299066542|emb|CBJ37732.1| Putative flagellar hook protein (flgE) [Ralstonia solanacearum
           CMR15]
          Length = 395

 Score = 76.4 bits (186), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/133 (24%), Positives = 62/133 (46%), Gaps = 9/133 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--------I 52
           M  S  I +      E+ L  ++++ +N +T GF+   ++FS++                
Sbjct: 1   MLDSIYIAMTGLHGYEEALRVISNDTTNMNTPGFKGSALQFSDLFYTNSGQSAQGGGHTA 60

Query: 53  DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDD 111
            Q    + +    L+ + G   +TG +LD A++G   F L++    +  TRDG+FK   D
Sbjct: 61  SQLGFGLNTVGTLLNFKQGQMQTTGNDLDVAVDGQGLFVLKAADGSLRYTRDGQFKFNTD 120

Query: 112 GSLVSASGKYPVL 124
           G+L+S++     +
Sbjct: 121 GNLISSTTGEQAM 133



 Score = 59.9 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 12/100 (12%), Positives = 34/100 (34%), Gaps = 5/100 (5%)

Query: 138 EIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRG 197
                  KG     G+  +   + +V  ++ F           +        +  T+  G
Sbjct: 295 YANGQTVKGAQLALGRFNSPDAVEAVGNNE-FKVVNGQAWETGVAG----TGAFGTLHSG 349

Query: 198 FLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
            +E+SN +   E   ++ + + + + + ++      + E 
Sbjct: 350 MVENSNVDLSQEFSNLVIMQRGYQASSQVVSTANDMLSEL 389


>gi|254699461|ref|ZP_05161289.1| flagellar basal body rod protein FlgG [Brucella suis bv. 5 str.
          513]
 gi|261749912|ref|ZP_05993621.1| predicted protein [Brucella suis bv. 5 str. 513]
 gi|261739665|gb|EEY27591.1| predicted protein [Brucella suis bv. 5 str. 513]
          Length = 77

 Score = 76.4 bits (186), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 26/52 (50%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
            +  I      A +  L  +A+N++N +T GF+  + +F++++   +   D
Sbjct: 1  MKALTIAATGMNAQQLNLEVIANNIANINTTGFKRARAEFTDLLYQSERTAD 52


>gi|222032829|emb|CAP75568.1| flagellar hook protein flgE [Escherichia coli LF82]
 gi|312945638|gb|ADR26465.1| flagellar hook protein FlgE [Escherichia coli O83:H1 str. NRG 857C]
          Length = 401

 Score = 76.4 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 73/195 (37%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ +LV+  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q+                K   T  +     S   +   N+  + N  
Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPSVNAFDASNAD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 177 SYNKKGSVTVFDSQG 191



 Score = 72.2 bits (175), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             +       +  +            +++ +++  + L +   ++G     ++  S    
Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 337

Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                       +  T+  G LE SN +   E+  MI   + + S    I   ++ +   
Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397

Query: 238 IR 239
           + 
Sbjct: 398 VN 399


>gi|218704484|ref|YP_002412003.1| flagellar hook protein FlgE [Escherichia coli UMN026]
 gi|293404360|ref|ZP_06648354.1| flgE [Escherichia coli FVEC1412]
 gi|298380140|ref|ZP_06989745.1| flagellar hook protein FlgE [Escherichia coli FVEC1302]
 gi|300899595|ref|ZP_07117834.1| flagellar hook protein FlgE [Escherichia coli MS 198-1]
 gi|218431581|emb|CAR12460.1| flagellar hook protein [Escherichia coli UMN026]
 gi|291428946|gb|EFF01971.1| flgE [Escherichia coli FVEC1412]
 gi|298279838|gb|EFI21346.1| flagellar hook protein FlgE [Escherichia coli FVEC1302]
 gi|300356866|gb|EFJ72736.1| flagellar hook protein FlgE [Escherichia coli MS 198-1]
          Length = 401

 Score = 76.4 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 73/195 (37%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ +LV+  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q+                K   T  +     S   +   N+  + N  
Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPSVNAFDASNAD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 177 SYNKKGSVTVFDSQG 191



 Score = 72.2 bits (175), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             +       +  +            +++ +++  + L +   ++G     ++  S    
Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 337

Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                       +  T+  G LE SN +   E+  MI   + + S    I   ++ +   
Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397

Query: 238 IR 239
           + 
Sbjct: 398 VN 399


>gi|317492428|ref|ZP_07950857.1| fagellar hook-basal body protein [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316919767|gb|EFV41097.1| fagellar hook-basal body protein [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 414

 Score = 76.1 bits (185), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 19/145 (13%), Positives = 41/145 (28%), Gaps = 9/145 (6%)

Query: 100 LTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG 159
           LT  G  +       V+A  +           QI     I       +     +++    
Sbjct: 272 LTFTGSMQQNTGKDGVTAKSQDGYAAGEMTGYQINDDGTITGTYSNQQTQLLAQIV---- 327

Query: 160 LYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMI 214
           + +    +G     N+    +                  +  G +E SN +   E+  MI
Sbjct: 328 MANFANPEGLQSEGNNMWKESATSGQAIVGVAGASGLGALTSGAVEASNVDLSKELVNMI 387

Query: 215 HLTQKFNSITTLIDENEKSMLEAIR 239
              + + S    I   ++ +   + 
Sbjct: 388 VAQRNYQSNAQTIKTQDQILQTLVN 412



 Score = 73.7 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 57/134 (42%), Gaps = 6/134 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
            FN  ++   A    L  + +N++N+ TVGF++  V F+++         +    V    
Sbjct: 2   GFNQAVSGLNAAASNLDVIGNNIANSQTVGFKSGSVTFADMFA-----GSKVGLGVKVAS 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G   +T   LD A+ G+ +F ++    G+  +R+G+F    D  L +A G + 
Sbjct: 57  VQQDFTDGITTTTNRGLDVAISGNGFFRMQDANGGVYYSRNGQFTKNQDNFLTNAQGVFL 116

Query: 123 VLDMASVPIQIPQK 136
               A+      Q+
Sbjct: 117 TGYPAAGSPPTIQQ 130


>gi|331657138|ref|ZP_08358100.1| flagellar hook protein FlgE [Escherichia coli TA206]
 gi|331055386|gb|EGI27395.1| flagellar hook protein FlgE [Escherichia coli TA206]
          Length = 401

 Score = 76.1 bits (185), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 73/195 (37%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ +LV+  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q+                K   T  +     S   +   N+  + N  
Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDSLPSVNAFDASNAD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 177 SYNKKGSVTVFDSQG 191



 Score = 72.6 bits (176), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             +       +  +            +++ +++  + L +   ++G     ++  S    
Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 337

Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                       +  T+  G LE SN +   E+  MI   + + S    I   ++ +   
Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397

Query: 238 IR 239
           + 
Sbjct: 398 VN 399


>gi|323191538|gb|EFZ76799.1| flgE [Escherichia coli RN587/1]
          Length = 400

 Score = 76.1 bits (185), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 40/187 (21%), Positives = 69/187 (36%), Gaps = 6/187 (3%)

Query: 7   IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66
           I      A+ ++L  +++N++N  TVG++++  +FS +         Q +    +G    
Sbjct: 5   IAATGLNAVNEQLDGISNNIANAGTVGYKSMTTQFSAMYA-----GSQAMGVSVAGTAQS 59

Query: 67  SKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125
               GS +STG  LD A+  D +F   +S   I  TR G F+   +G +V+ASG Y    
Sbjct: 60  ISRGGSLVSTGNALDLAINNDGFFVTCDSAGNISYTRAGSFETDKNGYIVNASGDYLQGY 119

Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185
                  +          + G I  +     T             R      + N     
Sbjct: 120 PVDDSGTLQTGTVTDIQIKTGNIPAQASSSLTFTANFDASDDAIDRTTVPFDATNSSSYT 179

Query: 186 LEDLSGV 192
               + V
Sbjct: 180 DSYTTTV 186



 Score = 68.4 bits (165), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 55/194 (28%), Gaps = 10/194 (5%)

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113
           Q            +  +    +TG            F  ++   I LT D          
Sbjct: 211 QYTFDGQQQTGVPATTLTFDPNTGKLTSPTTPQTIEFQTDAAAPIDLTVDYSTCTQYGSD 270

Query: 114 L-VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172
             V+ +            +Q+    +++     GE   +G+V+    L +     G    
Sbjct: 271 FSVTTNAANGYASATQNGVQVDDDGKVYATYSNGERMLQGQVV----LATFPNENGLEAV 326

Query: 173 ENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
             +                      T+  G LE SN +   E+  ++   + + + T +I
Sbjct: 327 SGTAWVQTGESGTPLIGVPGSGTCGTLSSGVLESSNVDITSELVNLMTAQRNYQANTKVI 386

Query: 228 DENEKSMLEAIRNI 241
             + +      + +
Sbjct: 387 ATSTQLDDALFQAM 400


>gi|188580157|ref|YP_001923602.1| hypothetical protein Mpop_0889 [Methylobacterium populi BJ001]
 gi|179343655|gb|ACB79067.1| protein of unknown function DUF1078 domain protein
           [Methylobacterium populi BJ001]
          Length = 460

 Score = 76.1 bits (185), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 38/216 (17%), Positives = 71/216 (32%), Gaps = 14/216 (6%)

Query: 1   MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
           M   ++    ++   A    LS ++ N++N+ T G++ I   F +++    +   Q    
Sbjct: 1   MDVFSALQTAVSGLKAQSFSLSNISGNIANSQTTGYKRIDTSFVDML-VDGDARSQTAGS 59

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-----------LTRDGRFK 107
           VA+  E  +   G+ +STG   + AL+G  +F +                   TR G F 
Sbjct: 60  VAAFSELTNSVQGNKVSTGVSTNMALDGQGFFVVRKKTTDAGGAESFSNANLFTRRGDFA 119

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
              DG LV+ +G Y V                  +      ++    I          + 
Sbjct: 120 PDKDGYLVNGAGAYLVGASLDPVTGQTTGTGPIKISNAIIPAKPTTTITYSANLPKSPAT 179

Query: 168 GFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSN 203
                    +S     T            G + ++N
Sbjct: 180 TNAASTGGLLSAFSDGTDPRVTPANGATTGTVSEAN 215



 Score = 62.6 bits (150), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 19/137 (13%), Positives = 42/137 (30%), Gaps = 3/137 (2%)

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           +       V+ +        +     +   D     G+    S  G  +A + +      
Sbjct: 326 QYAAASGTVTTNDLKQNGYASGSLNSVEVGDNGLISGKYSNGSVIG--LARVEVAQFVNP 383

Query: 167 QGFVRRE-NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225
            G       +          +  L   TV    +E SN +   E  +MI   Q +++ T 
Sbjct: 384 DGLKPDSLGNYEQTVASGEAINGLKDSTVVGANVEQSNTDIAAEFSKMIVTQQAYSANTR 443

Query: 226 LIDENEKSMLEAIRNIA 242
           ++   +  + + +  I 
Sbjct: 444 VMSTAQTMISDLLNVIR 460


>gi|187926954|ref|YP_001893299.1| flagellar basal body FlaE domain protein [Ralstonia pickettii 12J]
 gi|241665283|ref|YP_002983642.1| flagellar hook protein FlgE [Ralstonia pickettii 12D]
 gi|187728708|gb|ACD29872.1| flagellar basal body FlaE domain protein [Ralstonia pickettii 12J]
 gi|240867310|gb|ACS64970.1| protein of unknown function DUF1078 domain protein [Ralstonia
           pickettii 12D]
          Length = 402

 Score = 76.1 bits (185), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 58/135 (42%), Gaps = 4/135 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVAS 61
            F  GL+   A  + L  +  N++N +TVG++    +F +V          +Q    V  
Sbjct: 2   GFQQGLSGLDAASKNLDVIGSNVANANTVGYKKSTAEFGDVYARSLVGASDNQVGQGVEV 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPR--GIILTRDGRFKVTDDGSLVSASG 119
            +   S   G+   TG  LD A+ G  ++ +       +  +R+G+F+   +G ++SA+G
Sbjct: 62  TRVSQSFTQGNVTITGNPLDIAINGTGFYRMVDTASGQVSYSRNGQFQTDKNGYIISATG 121

Query: 120 KYPVLDMASVPIQIP 134
           +           ++ 
Sbjct: 122 QNLTGYGVDSTGKVN 136



 Score = 71.1 bits (172), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 12/137 (8%), Positives = 34/137 (24%), Gaps = 5/137 (3%)

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
            T  G   + +      D  +                    + +   +  + + +    +
Sbjct: 265 TTQYGGGYNDTAPGVTQDGYATGRLASYSVGTDGTITARYSNGRTATLGQIAMANFKAPE 324

Query: 168 GFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222
           G      +                   S   ++   +E SN +   E+  MI   + + +
Sbjct: 325 GLQNIGGNQWVETSNSGAPNLGTPGMGSFGLLQSSAVEQSNVDLSQELVNMIIAQRSYQA 384

Query: 223 ITTLIDENEKSMLEAIR 239
               I   +  +   + 
Sbjct: 385 NAQTIKTQDTILQTLVT 401


>gi|157160603|ref|YP_001457921.1| flagellar hook protein FlgE [Escherichia coli HS]
 gi|170020528|ref|YP_001725482.1| flagellar hook protein FlgE [Escherichia coli ATCC 8739]
 gi|312971213|ref|ZP_07785391.1| flagellar hook protein flgE [Escherichia coli 1827-70]
 gi|157066283|gb|ABV05538.1| flagellar hook protein FlgE [Escherichia coli HS]
 gi|169755456|gb|ACA78155.1| flagellar basal body FlaE domain protein [Escherichia coli ATCC
           8739]
 gi|310336415|gb|EFQ01601.1| flagellar hook protein flgE [Escherichia coli 1827-70]
          Length = 402

 Score = 76.1 bits (185), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 73/195 (37%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ +LV+  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q+                K   T  +     S   +   N+  + N  
Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPSVNAFDASNAD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 177 SYNKKGSVTVFDSQG 191



 Score = 72.6 bits (176), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 21/173 (12%), Positives = 55/173 (31%), Gaps = 6/173 (3%)

Query: 72  SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPI 131
            F + GT +D A+  +      +      T    F  +   +  + +      +      
Sbjct: 229 KFNANGTLVDGAMANNIATGAINGAEPA-TFSLSFLNSMQQNTGANNIVATTQNGYKPGD 287

Query: 132 QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PL 186
            +  +            +++ +++  + L +   ++G     ++  S             
Sbjct: 288 LVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTA 347

Query: 187 EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              +  T+  G LE SN +   E+  MI   + + S    I   ++ +   + 
Sbjct: 348 GTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400


>gi|52841451|ref|YP_095250.1| flagellar hook protein FlgE [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|52628562|gb|AAU27303.1| flagellar hook protein FlgE [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 437

 Score = 76.1 bits (185), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 60/122 (49%), Gaps = 2/122 (1%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV--VGAIKNDIDQKISFVASG 62
           FN  L+   A  + L  + +N++N+ T+GF+  + +F+++    A  +  +     V   
Sbjct: 3   FNTALSGIQASTRDLEVIGNNIANSATIGFKGSRAEFADIYSSSAYGSGSNAVGGGVKLS 62

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
           + + S   G+  ++   LD A+ G  +F L      I TR G+FK+ ++  +V+A+ +  
Sbjct: 63  RVHQSFATGTLSTSNNTLDLAVNGSGFFILSDQGAKIYTRAGQFKLNNENYIVNANNQRL 122

Query: 123 VL 124
             
Sbjct: 123 TG 124



 Score = 65.3 bits (157), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 12/98 (12%), Positives = 32/98 (32%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLED 201
             + +   +  + L +    +      N+  +           +  +     +  G LE+
Sbjct: 338 YTNGQSLAMGQIQLANFADPESLQNIGNTSWAETTASGQPLISAPGSGGLGLINSGRLEE 397

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E+ ++I+  + F +    I   +      I 
Sbjct: 398 SNVDLTGELVKLINAQRNFQANAQTIRTGDAITQTIIN 435


>gi|331652129|ref|ZP_08353148.1| flagellar hook protein FlgE [Escherichia coli M718]
 gi|331050407|gb|EGI22465.1| flagellar hook protein FlgE [Escherichia coli M718]
          Length = 402

 Score = 76.1 bits (185), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 73/195 (37%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ +LV+  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q+                K   T  +     S   +   N+  + N  
Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPSVNAFDASNAD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 177 SYNKKGSVTVFDSQG 191



 Score = 72.6 bits (176), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 21/173 (12%), Positives = 55/173 (31%), Gaps = 6/173 (3%)

Query: 72  SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPI 131
            F + GT +D A+  +      +      T    F  +   +  + +      +      
Sbjct: 229 EFNANGTLVDGAMANNIATGAINGADPA-TFSLSFLNSMQQNTGANNIVATTQNGYKPGD 287

Query: 132 QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PL 186
            +  +            +++ +++  + L +   ++G     ++  S             
Sbjct: 288 LVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTA 347

Query: 187 EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              +  T+  G LE SN +   E+  MI   + + S    I   ++ +   + 
Sbjct: 348 GTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400


>gi|217032455|ref|ZP_03437948.1| hypothetical protein HPB128_175g16 [Helicobacter pylori B128]
 gi|298736140|ref|YP_003728665.1| flagellar hook protein FlgE [Helicobacter pylori B8]
 gi|216945863|gb|EEC24483.1| hypothetical protein HPB128_175g16 [Helicobacter pylori B128]
 gi|298355329|emb|CBI66201.1| flagellar hook protein FlgE [Helicobacter pylori B8]
          Length = 605

 Score = 76.1 bits (185), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 56/146 (38%), Gaps = 22/146 (15%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56
           M  +     +     +  + ++++N++N +T+G+R+   +F  +  +  + ++ K     
Sbjct: 1   MNDTLLNAYSGIKTHQFGIDSLSNNIANVNTLGYRSNDPEFKTLFSSHLDALNAKSVVAN 60

Query: 57  ---SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---------------RGI 98
                V      LS + G ++ +  E   A +G  WF +                  +  
Sbjct: 61  DRNYGVTGSGNVLSNKDGEYMPSEGEFHMAYQGKGWFVIGPNKNGEMTINKDGFSKKQDN 120

Query: 99  ILTRDGRFKVTDDGSLVSASGKYPVL 124
            LTR G F    DG LV+  G Y   
Sbjct: 121 FLTRAGNFARDADGYLVTPEGYYVYG 146



 Score = 66.4 bits (160), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 34/103 (33%), Gaps = 16/103 (15%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS----------------GVTVKR 196
           + +A +G+ +    QG  +   +           E+                     ++ 
Sbjct: 500 EPVARIGILAFTNDQGLRKIGGNLYEMQEGTINGENRPLSGNPILGWDEEGKLKFGKIRH 559

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +LE SN N+   +  +I + + ++         +  + EAI 
Sbjct: 560 KYLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAIS 602


>gi|290474972|ref|YP_003467856.1| flagellar hook protein [Xenorhabdus bovienii SS-2004]
 gi|289174289|emb|CBJ81079.1| flagellar biosynthesis; hook protein [Xenorhabdus bovienii SS-2004]
          Length = 416

 Score = 76.1 bits (185), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 69/192 (35%), Gaps = 6/192 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++    F++V              V    
Sbjct: 2   AFSQAVSGLNAAASNLDVIGNNIANSATFGFKSSSAAFADVFS-----GSDVGLGVKVSG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
              + + GS  +T  +LD A+    +F + +S      +R+G+F +  D +L++  G   
Sbjct: 57  MVKNFKDGSTTTTSRQLDMAITQGGFFRMLDSNGSTFYSRNGQFNMDSDRNLINMQGMKL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A      P+  +    G            AT  +          ++ +        
Sbjct: 117 TGYPAVQGANGPEIQKGAAPGPISIPRDMLDAKATTNVTMTANLNSMNKKVDINPFNPSN 176

Query: 183 PTPLEDLSGVTV 194
                  SG++V
Sbjct: 177 KDSFNYSSGLSV 188



 Score = 74.5 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 17/140 (12%), Positives = 43/140 (30%), Gaps = 5/140 (3%)

Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
            F  +   S+   S      +  +       + +          +Q+ +V+  + L +  
Sbjct: 275 DFNNSKQQSISQDSISNQQQNGYAAGSFTNYRVDSDGKIHGLYSNQQTQVLGQVVLANFS 334

Query: 165 MSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
             +G   + ++                   +   +  G LE SN +   E+  MI   + 
Sbjct: 335 NPEGLAAQGDNVWVETGASGSPIVGTAGSGNFGKLISGALEASNVDMSQELVNMIVAQRN 394

Query: 220 FNSITTLIDENEKSMLEAIR 239
           + S    I   ++ +   + 
Sbjct: 395 YQSNAQTIKTQDQILQTLVS 414


>gi|318604252|emb|CBY25750.1| flagellar hook protein FlgE [Yersinia enterocolitica subsp.
           palearctica Y11]
          Length = 397

 Score = 76.1 bits (185), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 64/132 (48%), Gaps = 6/132 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SF+I      A+ ++L+T+++N++N+ T GF++ + +F+ +         Q +    SG 
Sbjct: 2   SFSIANTGLSAVTEQLNTISNNIANSGTKGFKSGRTEFASMYAQS-----QPLGVGVSGT 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122
               K+ GS   TG  +D A+ G+ +F +++       TR G F    +G LV+ASG   
Sbjct: 57  SQSIKKDGSIDRTGNAMDLAISGNGFFVVKNSSGDEAYTRAGMFTTDKNGVLVNASGMKL 116

Query: 123 VLDMASVPIQIP 134
               A     + 
Sbjct: 117 QGYPADAAGNVQ 128



 Score = 73.0 bits (177), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 23/155 (14%), Positives = 48/155 (30%), Gaps = 12/155 (7%)

Query: 92  LESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQK 151
                 I  T   +F      +   + G            +I     ++     G+   +
Sbjct: 250 DNYGIDITYTGTTQFHAEFLPAPSKSDGYTA---GTKNGERIENDGSVYATFSNGKQMLQ 306

Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANS 206
           GK++    L +     G   +  +  S           S  T     +  G LE SN + 
Sbjct: 307 GKLV----LANFANPNGLATQNGTTWSVTSRSGAPLLGSPGTGLLGNIVAGALEASNVDL 362

Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
             E+  ++   + + + T +I  N+  M    + +
Sbjct: 363 TAELVGLMTAQRNYQANTKIISTNDSMMNALFQVL 397


>gi|302343058|ref|YP_003807587.1| fagellar hook-basal body protein [Desulfarculus baarsii DSM 2075]
 gi|301639671|gb|ADK84993.1| fagellar hook-basal body protein [Desulfarculus baarsii DSM 2075]
          Length = 452

 Score = 76.1 bits (185), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 30/140 (21%), Positives = 64/140 (45%), Gaps = 13/140 (9%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ-------KI 56
           SF  G++   +  Q L+ VADN++N++T G+++ + +F++V+    +           ++
Sbjct: 5   SFFNGVSGLKSFSQGLNIVADNLANSNTYGYKSSRAEFADVLYRELSYTGSDLTTEIDQV 64

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI--ILTRDGRFKVT----D 110
              A+   +     G+   TG  LD A++G+ +F +++        TR G+F V      
Sbjct: 65  GQGATVWSHQLMNQGAIQETGRTLDLAIDGNGFFTVKNLDTEELYYTRAGQFGVDGVVGQ 124

Query: 111 DGSLVSASGKYPVLDMASVP 130
           +G +++  G           
Sbjct: 125 EGFIINDQGYRLQGFAIGDD 144



 Score = 69.5 bits (168), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 13/92 (14%), Positives = 34/92 (36%), Gaps = 7/92 (7%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPP-------TPLEDLSGVTVKRGFLEDSNANSM 207
           +  + L +        R  ++  + +             E+ +   ++   LE S  ++ 
Sbjct: 358 VGVVALTTFASPGNLRREGDNLWAYDADAGEIWVGQPTDEEFAMGAIEDQSLETSTVDTA 417

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            EM  MI   + F + +  +  +++ +  AI 
Sbjct: 418 TEMMNMIIYQRAFQASSKTVTTSDEMIKTAIN 449


>gi|291334314|gb|ADD93975.1| hypothetical protein [uncultured marine bacterium
           MedDCM-OCT-S09-C247]
          Length = 449

 Score = 76.1 bits (185), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 18/123 (14%), Positives = 37/123 (30%), Gaps = 5/123 (4%)

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
              D  S       + + +   + G  + +  V+  + L S     G  +  NS      
Sbjct: 324 VTQDGFSAGRLTNLEIDTYGNVQAGYSNGQNVVLGKIMLASFASESGLKQIGNSTFIATA 383

Query: 182 PPTPLEDLS-----GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                E           +  G +E SN +   E+  +I   + + +    I+ +      
Sbjct: 384 ASGDPELGEGAEDGFGQILSGSIERSNVDITEELVNLITSQRNYQAAAKAIETSTSMTQT 443

Query: 237 AIR 239
            I 
Sbjct: 444 IIN 446


>gi|281600495|gb|ADA73479.1| Flagellar hook protein FlgE [Shigella flexneri 2002017]
 gi|332761421|gb|EGJ91705.1| flagellar hook protein flgE [Shigella flexneri K-671]
 gi|333019459|gb|EGK38742.1| flagellar hook protein flgE [Shigella flexneri K-304]
          Length = 379

 Score = 76.1 bits (185), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 70/195 (35%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ +L++  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLLNTQGLQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
                +      Q+                K   T  +     S   +       + N  
Sbjct: 117 TGYPVTGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNAD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 177 SYNKKGSVTVFDSQG 191



 Score = 68.7 bits (166), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             +       +  +            +++ +++  + L +   ++G     ++  S    
Sbjct: 256 TQNGYKPGDLVSYQINDDGTVVGNNSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 315

Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                       +  T+  G LE SN +   E+  MI   + + S    I   ++ +   
Sbjct: 316 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYKSNAQTIKTQDQILNTR 375

Query: 238 IR 239
           + 
Sbjct: 376 VN 377


>gi|331671804|ref|ZP_08372600.1| LfgE [Escherichia coli TA280]
 gi|331070793|gb|EGI42152.1| LfgE [Escherichia coli TA280]
          Length = 400

 Score = 76.1 bits (185), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 40/187 (21%), Positives = 70/187 (37%), Gaps = 6/187 (3%)

Query: 7   IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66
           I      A+ ++L  +++N++N  TVG++++  +FS +         Q +    +G    
Sbjct: 5   IAATGLNAVNEQLDGISNNIANAGTVGYKSMTTQFSAMYA-----GSQAMGVSVAGTAQS 59

Query: 67  SKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125
               GS +STG  LD A+  D +F + +S   I  TR G F+   +G +V+ASG Y    
Sbjct: 60  ISRGGSLVSTGNALDLAINDDGFFVMCDSAGNISYTRAGSFETDKNGYIVNASGDYLQGY 119

Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185
                  +          + G I  +     T             R      + N     
Sbjct: 120 PVDDAGTLQTGTVTDIQIKTGNIPAQASSSLTFTANFDASDAAIDRTTVPFDATNSSSYT 179

Query: 186 LEDLSGV 192
               + V
Sbjct: 180 DSYTTTV 186



 Score = 68.7 bits (166), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 55/194 (28%), Gaps = 10/194 (5%)

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113
           Q            +  +    +TG            F  ++   I LT D          
Sbjct: 211 QYTFDGQQQTGVPATTLTFDPNTGKLTSPTTPQTIEFQTDAAAPIDLTVDYSTCTQYGSE 270

Query: 114 L-VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172
             V+ +            +Q+    +++     GE   +G+V+    L +     G    
Sbjct: 271 FSVTTNAADGYASATQNGVQVDDDGKVYATYSNGERMLQGQVV----LATFPNENGLEAV 326

Query: 173 ENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
             +                      T+  G LE SN +   E+  ++   + + + T +I
Sbjct: 327 SGTAWVQTGESGTPLIGVPGSGTCGTLTSGVLESSNVDITSELVNLMTAQRNYQANTKVI 386

Query: 228 DENEKSMLEAIRNI 241
             + +      + +
Sbjct: 387 ATSTQLDDALFQAM 400


>gi|296103611|ref|YP_003613757.1| Flagellar basal body FlaE domain protein [Enterobacter cloacae
           subsp. cloacae ATCC 13047]
 gi|295058070|gb|ADF62808.1| Flagellar basal body FlaE domain protein [Enterobacter cloacae
           subsp. cloacae ATCC 13047]
          Length = 399

 Score = 76.1 bits (185), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 59/149 (39%), Gaps = 7/149 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
            F+ GL+   A  + L  V +N++N+ TVGF+   V F+++              V    
Sbjct: 2   GFSQGLSGLSAAAKALDVVGNNIANSQTVGFKAGSVSFADIFA------GSTGMGVQVAG 55

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122
              +   G+ ++  + LD  + G  +F +      +   R+G+F+   +G +V+ +    
Sbjct: 56  VSQNFGDGALMNGASALDMGISGRGFFRMVDEAGSVFYGRNGQFEQDQNGFIVNKTNGLF 115

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQK 151
           +    +    I    ++  +    +    
Sbjct: 116 LTGYQATDGVINPGAQVGPIRIPTDDMPP 144



 Score = 76.1 bits (185), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 20/142 (14%), Positives = 41/142 (28%), Gaps = 9/142 (6%)

Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162
           D         + V                Q+    E+  +   G+       +A + L  
Sbjct: 260 DLNITQNASDTQVKLDEIDGQAPGKFNSYQVSDTGEVIAIYSNGKRQ----TVAQVVLAD 315

Query: 163 VDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLT 217
              + G  ++ N+  +           +  +     +    LE SN N   EM  MI   
Sbjct: 316 FANAGGLEQQGNNLWAETSQSGQPFLGTSGSGSFGDISGNMLESSNVNLGDEMVNMIVYQ 375

Query: 218 QKFNSITTLIDENEKSMLEAIR 239
           + + S +  I    + +   + 
Sbjct: 376 RNYQSNSQTIKTQSEVLQTLVN 397


>gi|74311638|ref|YP_310057.1| flagellar hook protein FlgE [Shigella sonnei Ss046]
 gi|157157539|ref|YP_001462310.1| flagellar hook protein FlgE [Escherichia coli E24377A]
 gi|191168462|ref|ZP_03030250.1| flagellar hook protein FlgE [Escherichia coli B7A]
 gi|193064513|ref|ZP_03045593.1| flagellar hook protein FlgE [Escherichia coli E22]
 gi|194438060|ref|ZP_03070153.1| flagellar hook protein FlgE [Escherichia coli 101-1]
 gi|209918330|ref|YP_002292414.1| flagellar hook protein FlgE [Escherichia coli SE11]
 gi|218694610|ref|YP_002402277.1| flagellar hook protein FlgE [Escherichia coli 55989]
 gi|253773900|ref|YP_003036731.1| flagellar hook protein FlgE [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|254161182|ref|YP_003044290.1| flagellar hook protein FlgE [Escherichia coli B str. REL606]
 gi|256018667|ref|ZP_05432532.1| flagellar hook protein FlgE [Shigella sp. D9]
 gi|260843316|ref|YP_003221094.1| flagellar hook protein FlgE [Escherichia coli O103:H2 str. 12009]
 gi|260854559|ref|YP_003228450.1| flagellar hook protein FlgE [Escherichia coli O26:H11 str. 11368]
 gi|260867439|ref|YP_003233841.1| flagellar hook protein FlgE [Escherichia coli O111:H- str. 11128]
 gi|293433366|ref|ZP_06661794.1| flagellar hook protein FlgE [Escherichia coli B088]
 gi|300816778|ref|ZP_07096998.1| flagellar hook protein FlgE [Escherichia coli MS 107-1]
 gi|300821143|ref|ZP_07101292.1| flagellar hook protein FlgE [Escherichia coli MS 119-7]
 gi|300902467|ref|ZP_07120449.1| flagellar hook protein FlgE [Escherichia coli MS 84-1]
 gi|300922602|ref|ZP_07138702.1| flagellar hook protein FlgE [Escherichia coli MS 182-1]
 gi|300928372|ref|ZP_07143906.1| flagellar hook protein FlgE [Escherichia coli MS 187-1]
 gi|301304985|ref|ZP_07211087.1| flagellar hook protein FlgE [Escherichia coli MS 124-1]
 gi|301328554|ref|ZP_07221615.1| flagellar hook protein FlgE [Escherichia coli MS 78-1]
 gi|309798070|ref|ZP_07692445.1| flagellar hook protein FlgE [Escherichia coli MS 145-7]
 gi|331667476|ref|ZP_08368340.1| flagellar hook protein FlgE [Escherichia coli TA271]
 gi|331676867|ref|ZP_08377563.1| flagellar hook protein FlgE [Escherichia coli H591]
 gi|332279736|ref|ZP_08392149.1| flagellar hook protein FlgE [Shigella sp. D9]
 gi|73855115|gb|AAZ87822.1| flagellar hook protein [Shigella sonnei Ss046]
 gi|157079569|gb|ABV19277.1| flagellar hook protein FlgE [Escherichia coli E24377A]
 gi|190901481|gb|EDV61242.1| flagellar hook protein FlgE [Escherichia coli B7A]
 gi|192927765|gb|EDV82379.1| flagellar hook protein FlgE [Escherichia coli E22]
 gi|194422996|gb|EDX38990.1| flagellar hook protein FlgE [Escherichia coli 101-1]
 gi|209911589|dbj|BAG76663.1| flagellar hook protein FlgE [Escherichia coli SE11]
 gi|218351342|emb|CAU97048.1| flagellar hook protein [Escherichia coli 55989]
 gi|253324944|gb|ACT29546.1| flagellar basal body FlaE domain protein [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253973083|gb|ACT38754.1| flagellar hook protein E [Escherichia coli B str. REL606]
 gi|253977297|gb|ACT42967.1| flagellar hook protein E [Escherichia coli BL21(DE3)]
 gi|257753208|dbj|BAI24710.1| flagellar hook protein FlgE [Escherichia coli O26:H11 str. 11368]
 gi|257758463|dbj|BAI29960.1| flagellar hook protein FlgE [Escherichia coli O103:H2 str. 12009]
 gi|257763795|dbj|BAI35290.1| flagellar hook protein FlgE [Escherichia coli O111:H- str. 11128]
 gi|291324185|gb|EFE63607.1| flagellar hook protein FlgE [Escherichia coli B088]
 gi|300405499|gb|EFJ89037.1| flagellar hook protein FlgE [Escherichia coli MS 84-1]
 gi|300421079|gb|EFK04390.1| flagellar hook protein FlgE [Escherichia coli MS 182-1]
 gi|300463630|gb|EFK27123.1| flagellar hook protein FlgE [Escherichia coli MS 187-1]
 gi|300526442|gb|EFK47511.1| flagellar hook protein FlgE [Escherichia coli MS 119-7]
 gi|300530552|gb|EFK51614.1| flagellar hook protein FlgE [Escherichia coli MS 107-1]
 gi|300839703|gb|EFK67463.1| flagellar hook protein FlgE [Escherichia coli MS 124-1]
 gi|300844946|gb|EFK72706.1| flagellar hook protein FlgE [Escherichia coli MS 78-1]
 gi|308118353|gb|EFO55615.1| flagellar hook protein FlgE [Escherichia coli MS 145-7]
 gi|313848602|emb|CAQ31597.2| flagellar hook protein FlgE, subunit of Flagellum [Escherichia coli
           BL21(DE3)]
 gi|315253877|gb|EFU33845.1| flagellar hook protein FlgE [Escherichia coli MS 85-1]
 gi|323156883|gb|EFZ43017.1| flagellar hook protein flgE [Escherichia coli EPECa14]
 gi|323163758|gb|EFZ49577.1| flagellar hook protein flgE [Escherichia coli E128010]
 gi|323165584|gb|EFZ51371.1| flagellar hook protein flgE [Shigella sonnei 53G]
 gi|323175693|gb|EFZ61287.1| flagellar hook protein flgE [Escherichia coli 1180]
 gi|323185801|gb|EFZ71162.1| flagellar hook protein flgE [Escherichia coli 1357]
 gi|323947622|gb|EGB43626.1| fagellar hook-basal body protein [Escherichia coli H120]
 gi|323962675|gb|EGB58253.1| fagellar hook-basal body protein [Escherichia coli H489]
 gi|323973335|gb|EGB68524.1| fagellar hook-basal body protein [Escherichia coli TA007]
 gi|324017420|gb|EGB86639.1| flagellar hook protein FlgE [Escherichia coli MS 117-3]
 gi|324117353|gb|EGC11260.1| fagellar hook-basal body protein [Escherichia coli E1167]
 gi|331065061|gb|EGI36956.1| flagellar hook protein FlgE [Escherichia coli TA271]
 gi|331075556|gb|EGI46854.1| flagellar hook protein FlgE [Escherichia coli H591]
 gi|332102088|gb|EGJ05434.1| flagellar hook protein FlgE [Shigella sp. D9]
          Length = 401

 Score = 76.1 bits (185), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 71/195 (36%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ +LV+  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q+                K   T  +     S   +       + N  
Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNAD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 177 SYNKKGSVTVFDSQG 191



 Score = 72.6 bits (176), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             +       +  +            +++ +++  + L +   ++G     ++  S    
Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 337

Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                       +  T+  G LE SN +   E+  MI   + + S    I   ++ +   
Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397

Query: 238 IR 239
           + 
Sbjct: 398 VN 399


>gi|322432989|ref|YP_004210238.1| flagellar hook-basal body protein [Acidobacterium sp. MP5ACTX9]
 gi|321165216|gb|ADW70920.1| flagellar hook-basal body protein [Acidobacterium sp. MP5ACTX9]
          Length = 412

 Score = 76.1 bits (185), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 62/153 (40%), Gaps = 6/153 (3%)

Query: 9   LAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----KNDIDQKISFVASGK 63
           L+  +A + +L  V++N++N DTVGF+   V FS+V          ND  Q    V + +
Sbjct: 8   LSGLIASQSQLQAVSNNLANLDTVGFKDQNVNFSDVFAQSSLNNGSNDPVQTGLGVNASQ 67

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG   + AL G+ +F  ++       TR G F     G LV+ SG   
Sbjct: 68  TTSDFTDGAVSATGIASNMALTGNGFFVTKTATGATAYTRAGDFTKNSSGQLVTPSGDLV 127

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI 155
           +   A+  +     +        G +       
Sbjct: 128 MGYPAANGVVNTSGELQPIQIGTGTVIPASATT 160



 Score = 66.0 bits (159), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 15/96 (15%), Positives = 33/96 (34%), Gaps = 5/96 (5%)

Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNAN 205
               +  + + S   +QG +R  N+     +          E      +  G +E SN +
Sbjct: 315 NPVALGQVAVASFANTQGLLRTGNNDYQATVGSGAASVGTAETGGRGVITGGSVESSNVD 374

Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
              E  +MI   Q + +    +   ++     ++ I
Sbjct: 375 VAAEFAKMIVAQQAYQANAKTVTTFDQISQATLQMI 410


>gi|291538503|emb|CBL11614.1| fagellar hook-basal body proteins [Roseburia intestinalis XB6B4]
          Length = 547

 Score = 76.1 bits (185), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 51/141 (36%), Gaps = 18/141 (12%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS--- 61
               ++     + ++  + +N++N +TV F++  V F +V+  + ++     +   +   
Sbjct: 1   MYSAVSGLKTHQTKMDVIGNNIANVNTVAFKSSSVVFQDVLYQMTSNASGANAATGTGGV 60

Query: 62  ------------GKEYLSKEVGSFISTGTELDFALEGD---AWFALESPRGIILTRDGRF 106
                                G+  +TG   D  L       +F + +    + TR G F
Sbjct: 61  NAKQIGLGVTTGATNLSITTSGAAETTGRAFDIRLSDQSTTNFFVVNNGSENLFTRAGSF 120

Query: 107 KVTDDGSLVSASGKYPVLDMA 127
            V   G+L   S  Y V+   
Sbjct: 121 YVDGAGNLCMTSTGYTVMGWQ 141



 Score = 74.5 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 15/129 (11%), Positives = 42/129 (32%), Gaps = 6/129 (4%)

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           +           +   I    +   + +    +   +++  + +     + G  +   + 
Sbjct: 416 SIDDGVTGKGKKLGAMIGISIDNNGLIKGTYDNGNTEILGQIAVAQFANASGLEKVGENC 475

Query: 177 ISPNIPPTPLE------DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
               +     +         G ++  G LE SN +   E  QMI   + F + + +I  +
Sbjct: 476 YRTTLNSGEFDGIGVEISADGSSMTSGELEMSNVDLSTEFTQMIITQRGFQANSRIITTS 535

Query: 231 EKSMLEAIR 239
           +  + E + 
Sbjct: 536 DTLLEELVN 544


>gi|289670507|ref|ZP_06491582.1| flagellar hook protein FlgE [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 262

 Score = 76.1 bits (185), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 33/92 (35%), Gaps = 5/92 (5%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSM 207
           K +  + L S    QG   + N+  + +         +        V+ G LE S  +  
Sbjct: 169 KPLGQVALSSFVNPQGLQSQGNNMWAESYTSGAARTGAPNTSDLGQVESGSLEASTVDLT 228

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            ++  MI   + F + + +I   ++     I 
Sbjct: 229 EQLVNMIVAQRNFQANSQMISTQDQVTQTIIN 260


>gi|58039490|ref|YP_191454.1| flagellar hook protein FlgE [Gluconobacter oxydans 621H]
 gi|58001904|gb|AAW60798.1| Flagellar hook protein FlgE [Gluconobacter oxydans 621H]
          Length = 411

 Score = 75.7 bits (184), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 51/139 (36%), Gaps = 14/139 (10%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK--NDIDQKISFV 59
             + +  ++   A     + +++N++N+ T G++     F + V   +  ND +     V
Sbjct: 5   INAVHTAVSGLNAQSHAFTDLSNNIANSQTTGYKASTTSFEDYVTNNELANDGESLSDSV 64

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALES------------PRGIILTRDGRFK 107
           A+     +       ++      A+ G+ +F +                    TR+G F 
Sbjct: 65  AATTRQHTDNQCMVTTSTNSTALAISGNGFFNVVQATGQSNDSTPVLGTQQYYTRNGDFS 124

Query: 108 VTDDGSLVSASGKYPVLDM 126
              +G LV+ SG Y     
Sbjct: 125 QDKNGYLVNTSGYYLEGYN 143



 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 10/107 (9%), Positives = 35/107 (32%), Gaps = 5/107 (4%)

Query: 137 DEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSG 191
            E          +   +++A + L +         +     +            +     
Sbjct: 301 METDGSVMATFDNGYSQLVAKIPLTTFADPNSLSAQNGQAYTATSQSGSPQINAVNTNGA 360

Query: 192 VTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            T+  G +E+S  +   ++ ++I   Q + + T ++   ++ +   +
Sbjct: 361 GTLTTGSIEESTTDLTGDLSKLIVAQQAYGANTKVVSTADQLLQTTL 407


>gi|121997321|ref|YP_001002108.1| flagellar basal-body rod protein FlgC [Halorhodospira halophila
           SL1]
 gi|121588726|gb|ABM61306.1| flagellar basal-body rod protein FlgC [Halorhodospira halophila
           SL1]
          Length = 189

 Score = 75.7 bits (184), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 32/244 (13%), Positives = 67/244 (27%), Gaps = 67/244 (27%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQK 55
             + ++      A + RL+TVA N++N +TV       +R  +  F+         + Q 
Sbjct: 4   MNAIDVAGTGMNAQQLRLNTVASNLANAETVASSPEEAYRARQPVFAAA-------LHQA 56

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115
                 G         ++  +G  +D                         +++      
Sbjct: 57  QGGYPQGGGPQPAHTPTWAESGGPVD-------------------------RISPVSFQR 91

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
              G  P    ++          +         S           +              
Sbjct: 92  QFFGGEPAGVPSAGDPYASPSPSVPVFMPGVVESDAEIEPLYQPHHPQADDD-------- 143

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
                                G++  SN N++ EM  MI  ++ F +   +++ +   ML
Sbjct: 144 ---------------------GYVYRSNVNTVEEMTNMISASRSFQNNVEVMNTSRDLML 182

Query: 236 EAIR 239
           E +R
Sbjct: 183 ETLR 186


>gi|308183061|ref|YP_003927188.1| flagellar hook protein FlgE [Helicobacter pylori PeCan4]
 gi|308065246|gb|ADO07138.1| flagellar hook protein FlgE [Helicobacter pylori PeCan4]
          Length = 605

 Score = 75.7 bits (184), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 56/146 (38%), Gaps = 22/146 (15%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56
           M  +     +     +  + ++++N++N +T+G+R+   +F  +  +  + ++ K     
Sbjct: 1   MNDTLLNAYSGIKTHQFGIDSLSNNIANVNTLGYRSNDPEFKTLFSSHLDALNAKSVVAN 60

Query: 57  ---SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---------------RGI 98
                V      LS + G ++ +  E   A +G  WF +                  +  
Sbjct: 61  DRNYGVTGSGNVLSNKDGEYMPSEGEFHMAYQGKGWFVIGPNKNGEMTINKDGFSKKQDN 120

Query: 99  ILTRDGRFKVTDDGSLVSASGKYPVL 124
            LTR G F    DG LV+  G Y   
Sbjct: 121 FLTRAGNFARDADGYLVTPEGYYVYG 146



 Score = 66.0 bits (159), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 34/103 (33%), Gaps = 16/103 (15%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS----------------GVTVKR 196
           + +A +G+ +    QG  +   +           E+                     ++ 
Sbjct: 500 EPVARIGILAFTNDQGLRKIGGNLYEMQEGTINGENRPLSGNPILGWDEEGKLKFGKIRH 559

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +LE SN N+   +  +I + + ++         +  + EAI 
Sbjct: 560 KYLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAIS 602


>gi|108563315|ref|YP_627631.1| flagellar hook protein FlgE [Helicobacter pylori HPAG1]
 gi|107837088|gb|ABF84957.1| flagellar hook protein [Helicobacter pylori HPAG1]
          Length = 605

 Score = 75.7 bits (184), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 56/146 (38%), Gaps = 22/146 (15%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56
           M  +     +     +  + ++++N++N +T+G+R+   +F  +  +  + ++ K     
Sbjct: 1   MNDTLLNAYSGIKTHQFGIDSLSNNIANVNTLGYRSNDPEFKTLFSSHLDALNAKSVVAN 60

Query: 57  ---SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---------------RGI 98
                V      LS + G ++ +  E   A +G  WF +                  +  
Sbjct: 61  DRNYGVTGSGNVLSNKDGEYMPSEGEFHMAYQGKGWFVIGPNKNGEMTINKDGFSKKQDN 120

Query: 99  ILTRDGRFKVTDDGSLVSASGKYPVL 124
            LTR G F    DG LV+  G Y   
Sbjct: 121 FLTRAGNFARDADGYLVTPEGYYVYG 146



 Score = 66.0 bits (159), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 34/103 (33%), Gaps = 16/103 (15%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS----------------GVTVKR 196
           + +A +G+ +    QG  +   +           E+                     ++ 
Sbjct: 500 EPVARIGILAFTNDQGLRKIGGNLYEMQEGTINGENRPLSGNPILGWDEEGKLKFGKIRH 559

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +LE SN N+   +  +I + + ++         +  + EAI 
Sbjct: 560 KYLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAIS 602


>gi|89068728|ref|ZP_01156114.1| flagellar hook protein FlgE, putative [Oceanicola granulosus
           HTCC2516]
 gi|89045691|gb|EAR51753.1| flagellar hook protein FlgE, putative [Oceanicola granulosus
           HTCC2516]
          Length = 432

 Score = 75.7 bits (184), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 12/83 (14%), Positives = 31/83 (37%), Gaps = 5/83 (6%)

Query: 162 SVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
           +V   +G V    +    +     +           ++  G LE SN +   E+  +I  
Sbjct: 347 NVSNPEGLVAGNGNAYKLSRASGAMTLGIAGGGGTASIYAGALEGSNVDIAEELTDLIAT 406

Query: 217 TQKFNSITTLIDENEKSMLEAIR 239
            + +++   ++   ++ + E  R
Sbjct: 407 QRAYSTNAKVVTTADEMLDETTR 429



 Score = 68.0 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/135 (24%), Positives = 58/135 (42%), Gaps = 10/135 (7%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +   G++   A    ++ +++N++N +T GFR     FS++V     +    +S V +  
Sbjct: 6   AMKTGVSGLQANAASVANISENIANANTDGFRRS---FSQMVTTTTTN-PSSMSGVIARD 61

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGI------ILTRDGRFKVTDDGSLVSA 117
                  GS   T +  D ALEG  +F +            +LTR G F   ++G+L +A
Sbjct: 62  RIDMGTPGSMRPTDSATDLALEGGGFFVVSQRPDEPLASNYMLTRAGSFTPDENGNLKNA 121

Query: 118 SGKYPVLDMASVPIQ 132
           +G Y          Q
Sbjct: 122 AGFYLAGFPTDQNGQ 136


>gi|89895709|ref|YP_519196.1| hypothetical protein DSY2963 [Desulfitobacterium hafniense Y51]
 gi|89335157|dbj|BAE84752.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 312

 Score = 75.7 bits (184), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 20/149 (13%), Positives = 48/149 (32%), Gaps = 14/149 (9%)

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
             + + G  +  +G        +VP                 I    + +  + + +   
Sbjct: 165 IDMDELGRPLDWNGDILP-TAFAVPEGAEDVQISTEGVLSATIDGSRQTLGQINIVTFAN 223

Query: 166 SQGFVRRENSGISPNI------------PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQM 213
            +G VR  ++                  P + +E+ +   ++   LE SN N    M +M
Sbjct: 224 PEGLVRDGDNLYFAPDTAGVTGDELVGTPGSQVEERTLGKLRTQSLEGSNVNLASAMTEM 283

Query: 214 IHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           I + + +     +I   ++ M     ++ 
Sbjct: 284 IQVQRAYQLNARMITNGDQ-MWSMANSLR 311



 Score = 71.4 bits (173), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 54/129 (41%), Gaps = 13/129 (10%)

Query: 19  LSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------------ISFVASGKEYL 66
           +  + +NMSN +T G++  +V F+E + A     +++             + V       
Sbjct: 1   MDILGNNMSNVNTPGYKAQRVNFAEALAAEMRPAEREFNGQLVGERIDVGAGVIYPTIDT 60

Query: 67  SKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGKYPVLD 125
               G    T    D A++G+ +F + +  G    TR G F++   G LV++ G    + 
Sbjct: 61  DYRQGIIRETENPFDLAIDGEGFFPVRTANGESRYTRVGNFELDSQGKLVNSDGYILEVK 120

Query: 126 MASVPIQIP 134
           + +  + + 
Sbjct: 121 IPADAMDLY 129


>gi|317012717|gb|ADU83325.1| flagellar hook protein FlgE [Helicobacter pylori Lithuania75]
          Length = 605

 Score = 75.7 bits (184), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 56/146 (38%), Gaps = 22/146 (15%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56
           M  +     +     +  + ++++N++N +T+G+R+   +F  +  +  + ++ K     
Sbjct: 1   MNDTLLNAYSGIKTHQFGIDSLSNNIANVNTLGYRSNDPEFKTLFSSHLDALNAKSVVAN 60

Query: 57  ---SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---------------RGI 98
                V      LS + G ++ +  E   A +G  WF +                  +  
Sbjct: 61  DRNYGVTGSGNVLSNKDGEYMPSEGEFHMAYQGKGWFVIGPNKNGEMTINKDGFSKKQDN 120

Query: 99  ILTRDGRFKVTDDGSLVSASGKYPVL 124
            LTR G F    DG LV+  G Y   
Sbjct: 121 FLTRAGNFARDADGYLVTPEGYYVYG 146



 Score = 66.0 bits (159), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 34/103 (33%), Gaps = 16/103 (15%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS----------------GVTVKR 196
           + +A +G+ +    QG  +   +           E+                     ++ 
Sbjct: 500 EPVARIGILAFTNDQGLRKIGGNLYEMQEGTINGENRPLSGNPILGWDEEGKLKFGKIRH 559

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +LE SN N+   +  +I + + ++         +  + EAI 
Sbjct: 560 KYLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAIS 602


>gi|218689029|ref|YP_002397241.1| flagellar hook protein FlgE [Escherichia coli ED1a]
 gi|218426593|emb|CAR07421.1| flagellar hook protein [Escherichia coli ED1a]
          Length = 401

 Score = 75.7 bits (184), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 73/195 (37%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ +LV+  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q+                K   T  +     S   +   N+  + N  
Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDSLPSVNAFDASNAD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 177 SYNKKGSVTVFDSQG 191



 Score = 72.2 bits (175), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             +       +  +            +++ +++  + L +   ++G     ++  S    
Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 337

Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                       +  T+  G LE SN +   E+  MI   + + S    I   ++ +   
Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397

Query: 238 IR 239
           + 
Sbjct: 398 VN 399


>gi|15645524|ref|NP_207700.1| flagellar hook protein FlgE [Helicobacter pylori 26695]
 gi|2314044|gb|AAD07954.1| flagellar hook (flgE) [Helicobacter pylori 26695]
          Length = 605

 Score = 75.7 bits (184), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 56/146 (38%), Gaps = 22/146 (15%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56
           M  +     +     +  + ++++N++N +T+G+R+   +F  +  +  + ++ K     
Sbjct: 1   MNDTLLNAYSGIKTHQFGIDSLSNNIANVNTLGYRSNDPEFKTLFSSHLDALNAKSVVAN 60

Query: 57  ---SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---------------RGI 98
                V      LS + G ++ +  E   A +G  WF +                  +  
Sbjct: 61  DRNYGVTGSGNVLSNKDGEYMPSEGEFHMAYQGKGWFVIGPNKNGEITINKDGFSKKQDN 120

Query: 99  ILTRDGRFKVTDDGSLVSASGKYPVL 124
            LTR G F    DG LV+  G Y   
Sbjct: 121 FLTRAGNFARDADGYLVTPEGYYVYG 146



 Score = 66.0 bits (159), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 34/103 (33%), Gaps = 16/103 (15%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS----------------GVTVKR 196
           + +A +G+ +    QG  +   +           E+                     ++ 
Sbjct: 500 EPVARIGILAFTNDQGLRKIGGNLYEMQEGTINGENRPLSGNPILGWDEEGKLKFGKIRH 559

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +LE SN N+   +  +I + + ++         +  + EAI 
Sbjct: 560 KYLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAIS 602


>gi|308184693|ref|YP_003928826.1| flagellar hook protein FlgE [Helicobacter pylori SJM180]
 gi|308060613|gb|ADO02509.1| flagellar hook protein FlgE [Helicobacter pylori SJM180]
          Length = 605

 Score = 75.7 bits (184), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 56/146 (38%), Gaps = 22/146 (15%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56
           M  +     +     +  + ++++N++N +T+G+R+   +F  +  +  + ++ K     
Sbjct: 1   MNDTLLNAYSGIKTHQFGIDSLSNNIANVNTLGYRSNDPEFKTLFSSHLDALNAKSVVAN 60

Query: 57  ---SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---------------RGI 98
                V      LS + G ++ +  E   A +G  WF +                  +  
Sbjct: 61  DRNYGVTGSGNVLSNKDGEYMPSEGEFHMAYQGKGWFVIGPNKNGEMTINKDGFSKKQDN 120

Query: 99  ILTRDGRFKVTDDGSLVSASGKYPVL 124
            LTR G F    DG LV+  G Y   
Sbjct: 121 FLTRAGNFARDADGYLVTPEGYYVYG 146



 Score = 66.0 bits (159), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 34/103 (33%), Gaps = 16/103 (15%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS----------------GVTVKR 196
           + +A +G+ +    QG  +   +           E+                     ++ 
Sbjct: 500 EPVARIGILAFTNDQGLRKIGGNLYEMQEGTINGENRPLSGNPILGWDEEGKLKFGKIRH 559

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +LE SN N+   +  +I + + ++         +  + EAI 
Sbjct: 560 KYLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAIS 602


>gi|297380105|gb|ADI34992.1| flagellar hook protein FlgE [Helicobacter pylori v225d]
 gi|308062226|gb|ADO04114.1| flagellar hook protein FlgE [Helicobacter pylori Cuz20]
 gi|308063738|gb|ADO05625.1| flagellar hook protein FlgE [Helicobacter pylori Sat464]
 gi|317178740|dbj|BAJ56528.1| flagellar hook protein FlgE [Helicobacter pylori F30]
          Length = 605

 Score = 75.7 bits (184), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 56/146 (38%), Gaps = 22/146 (15%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56
           M  +     +     +  + ++++N++N +T+G+R+   +F  +  +  + ++ K     
Sbjct: 1   MNDTLLNAYSGIKTHQFGIDSLSNNIANVNTLGYRSNDPEFKTLFSSHLDALNAKSVVAN 60

Query: 57  ---SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---------------RGI 98
                V      LS + G ++ +  E   A +G  WF +                  +  
Sbjct: 61  DRNYGVTGSGNVLSNKDGEYMPSEGEFHMAYQGKGWFVIGPNKNGEITINKDGFSKKQDN 120

Query: 99  ILTRDGRFKVTDDGSLVSASGKYPVL 124
            LTR G F    DG LV+  G Y   
Sbjct: 121 FLTRAGNFARDADGYLVTPEGYYVYG 146



 Score = 66.0 bits (159), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 34/103 (33%), Gaps = 16/103 (15%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS----------------GVTVKR 196
           + +A +G+ +    QG  +   +           E+                     ++ 
Sbjct: 500 EPVARIGILAFTNDQGLRKIGGNLYEMQEGTINGENRPLSGNPILGWDEEGKLKFGKIRH 559

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +LE SN N+   +  +I + + ++         +  + EAI 
Sbjct: 560 KYLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAIS 602


>gi|241589579|ref|YP_002979604.1| protein of unknown function DUF1078 domain protein [Ralstonia
           pickettii 12D]
 gi|240868291|gb|ACS65950.1| protein of unknown function DUF1078 domain protein [Ralstonia
           pickettii 12D]
          Length = 401

 Score = 75.7 bits (184), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 32/135 (23%), Positives = 62/135 (45%), Gaps = 4/135 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVAS 61
            F  GL+   A  + LS++  N++N +TVG++   V+F +V          +Q    V+ 
Sbjct: 2   GFQQGLSGLDAASKNLSSIGSNVANVNTVGYKKSTVQFGDVYARSLVGATDNQIGQGVSV 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPR--GIILTRDGRFKVTDDGSLVSASG 119
            +   S   G+   TG  LD A+ G  ++ +       +  TR+G+F+   +G ++SA+G
Sbjct: 62  TRVSQSFTQGNVTVTGNPLDIAINGMGFYRMVDSSSGQVSYTRNGQFQTDKNGFVISATG 121

Query: 120 KYPVLDMASVPIQIP 134
           +           ++ 
Sbjct: 122 QNLTGYGVDASGKVN 136



 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 12/124 (9%), Positives = 31/124 (25%), Gaps = 5/124 (4%)

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
               D  +          I         + +  V   + + +    +G      +     
Sbjct: 276 MVKQDGYATGRLASYSVGIDGTVTGQYSNGRSAVFGQIAMANFKAPEGLQNIGGNQWVET 335

Query: 181 IPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
                         S   ++   +E SN +   E+  MI   + + +    I   +  + 
Sbjct: 336 ANSGSPNLGTPGMGSFGLLRSSAVEQSNVDLSVELVNMIVAQRSYQANAQTIKTEDSLLQ 395

Query: 236 EAIR 239
             + 
Sbjct: 396 TLVS 399


>gi|110805093|ref|YP_688613.1| flagellar hook protein FlgE [Shigella flexneri 5 str. 8401]
 gi|110614641|gb|ABF03308.1| flagellar hook protein FlgE [Shigella flexneri 5 str. 8401]
          Length = 402

 Score = 75.7 bits (184), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 70/195 (35%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ +L++  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLLNTQGLQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
                +      Q+                K   T  +     S   +       + N  
Sbjct: 117 TGYPVTGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNAD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 177 SYNKKGSVTVFDSQG 191



 Score = 69.5 bits (168), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 21/173 (12%), Positives = 55/173 (31%), Gaps = 6/173 (3%)

Query: 72  SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPI 131
            F + GT +D A+  +      +      T    F  +   +  + +      +      
Sbjct: 229 EFNANGTLVDGAMANNIATGAINGAEPA-TFSLSFLNSMQQNTGANNIVATTQNGYKPGD 287

Query: 132 QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PL 186
            +  +            +++ +++  + L +   ++G     ++  S             
Sbjct: 288 LVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTA 347

Query: 187 EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              +  T+  G LE SN +   E+  MI   + + S    I   ++ +   + 
Sbjct: 348 GTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYKSNAQTIKTQDQILNTRVN 400


>gi|332759635|gb|EGJ89940.1| flagellar hook protein flgE [Shigella flexneri 2747-71]
 gi|332767683|gb|EGJ97876.1| flagellar hook protein FlgE [Shigella flexneri 2930-71]
          Length = 402

 Score = 75.7 bits (184), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 70/195 (35%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ +L++  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLLNTQGLQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
                +      Q+                K   T  +     S   +       + N  
Sbjct: 117 TGYPVTGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNAD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 177 SYNKKGSVTVFDSQG 191



 Score = 69.1 bits (167), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 21/173 (12%), Positives = 55/173 (31%), Gaps = 6/173 (3%)

Query: 72  SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPI 131
            F + GT +D A+  +      +      T    F  +   +  + +      +      
Sbjct: 229 EFNANGTLVDGAMANNIATGAINGAEPA-TFSLSFLNSMQQNTGANNIVATTQNGYKPGD 287

Query: 132 QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PL 186
            +  +            +++ +++  + L +   ++G     ++  S             
Sbjct: 288 LVSYQINDDGTVVGSNSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTA 347

Query: 187 EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              +  T+  G LE SN +   E+  MI   + + S    I   ++ +   + 
Sbjct: 348 GTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYKSNAQTIKTQDQILNTRVN 400


>gi|317182208|dbj|BAJ59992.1| flagellar hook protein FlgE [Helicobacter pylori F57]
          Length = 605

 Score = 75.7 bits (184), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 56/146 (38%), Gaps = 22/146 (15%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56
           M  +     +     +  + ++++N++N +T+G+R+   +F  +  +  + ++ K     
Sbjct: 1   MNDTLLNAYSGIKTHQFGIDSLSNNIANVNTLGYRSNDPEFKTLFSSHLDALNAKSVVAN 60

Query: 57  ---SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---------------RGI 98
                V      LS + G ++ +  E   A +G  WF +                  +  
Sbjct: 61  DRNYGVTGSGNVLSNKDGEYMPSEGEFHMAYQGKGWFVIGPNKNGEITINKDGFSKKQDN 120

Query: 99  ILTRDGRFKVTDDGSLVSASGKYPVL 124
            LTR G F    DG LV+  G Y   
Sbjct: 121 FLTRAGNFARDADGYLVTPEGYYVYG 146



 Score = 66.0 bits (159), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 34/103 (33%), Gaps = 16/103 (15%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS----------------GVTVKR 196
           + +A +G+ +    QG  +   +           E+                     ++ 
Sbjct: 500 EPVARIGILAFTNDQGLRKIGGNLYEMQEGTINGENRPLSGNPILGWDEEGKLKFGKIRH 559

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +LE SN N+   +  +I + + ++         +  + EAI 
Sbjct: 560 KYLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAIS 602


>gi|317177697|dbj|BAJ55486.1| flagellar hook protein FlgE [Helicobacter pylori F16]
          Length = 605

 Score = 75.7 bits (184), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 56/146 (38%), Gaps = 22/146 (15%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56
           M  +     +     +  + ++++N++N +T+G+R+   +F  +  +  + ++ K     
Sbjct: 1   MNDTLLNAYSGIKTHQFGIDSLSNNIANVNTLGYRSNDPEFKTLFSSHLDALNAKSVVAN 60

Query: 57  ---SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---------------RGI 98
                V      LS + G ++ +  E   A +G  WF +                  +  
Sbjct: 61  DRNYGVTGSGNVLSNKDGEYMPSEGEFHMAYQGKGWFVIGPNKNGEITINKDGFSKKQDN 120

Query: 99  ILTRDGRFKVTDDGSLVSASGKYPVL 124
            LTR G F    DG LV+  G Y   
Sbjct: 121 FLTRAGNFARDADGYLVTPEGYYVYG 146



 Score = 66.0 bits (159), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 34/103 (33%), Gaps = 16/103 (15%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS----------------GVTVKR 196
           + +A +G+ +    QG  +   +           E+                     ++ 
Sbjct: 500 EPVARIGILAFTNDQGLRKIGGNLYEMQEGTINGENRPLSGNPILGWDEEGKLKFGKIRH 559

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +LE SN N+   +  +I + + ++         +  + EAI 
Sbjct: 560 KYLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAIS 602


>gi|270262401|ref|ZP_06190672.1| flagellar hook protein FlgE [Serratia odorifera 4Rx13]
 gi|270043085|gb|EFA16178.1| flagellar hook protein FlgE [Serratia odorifera 4Rx13]
          Length = 410

 Score = 75.7 bits (184), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 18/142 (12%), Positives = 41/142 (28%), Gaps = 5/142 (3%)

Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162
              F  +   S+ S S      D  +       +            +Q+ +++  + L +
Sbjct: 267 SLSFAKSMQQSVSSDSVSKVSQDGYTAGEYTNFQINNDGSVVGIYSNQQTQLLGQIVLTN 326

Query: 163 VDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217
               +G   + ++                       +  G LE SN +   E+  MI   
Sbjct: 327 FSNPEGLSSQGDNVWQETGASGQPRVGLAGSGGFGKLTSGALEASNVDLSQELVNMIVAQ 386

Query: 218 QKFNSITTLIDENEKSMLEAIR 239
           + + S    I   +  +   + 
Sbjct: 387 RNYQSNAQTIKTQDSILQTLVS 408



 Score = 73.0 bits (177), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 59/134 (44%), Gaps = 6/134 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++  V F+++         Q    V    
Sbjct: 2   AFSQAVSGLNAAATNLDVIGNNIANSATSGFKSGTVSFADMFA-----GSQVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
              + + G+   T   LD A+  + +F   +   GI  +R+G+FK+ ++ +L +  G   
Sbjct: 57  ITQNFKGGTTTGTSRALDVAISDNGFFRLQDKDGGIFYSRNGQFKLDENRNLTNMQGLQL 116

Query: 123 VLDMASVPIQIPQK 136
               A+      Q+
Sbjct: 117 TGFPAAGSPPTIQQ 130


>gi|154252984|ref|YP_001413808.1| hypothetical protein Plav_2542 [Parvibaculum lavamentivorans DS-1]
 gi|154156934|gb|ABS64151.1| protein of unknown function DUF1078 domain protein [Parvibaculum
           lavamentivorans DS-1]
          Length = 454

 Score = 75.7 bits (184), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 48/137 (35%), Gaps = 12/137 (8%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           S    +    A    L  ++DN++N+ T+GF+     F ++V A  +  +     V +  
Sbjct: 6   SMTTAITGIRAQSSALGHISDNIANSQTIGFKRTDTNFQDIVTASTSR-NHLPGAVLAAP 64

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALE-----------SPRGIILTRDGRFKVTDDG 112
            + +   GS  ++      A+ G  +F +                   TR G F +   G
Sbjct: 65  SFTNNVQGSIDASEVPTHMAINGSGFFVVSARVATVDGNPVFDNVNYYTRRGDFSMDKYG 124

Query: 113 SLVSASGKYPVLDMASV 129
            LV+  G          
Sbjct: 125 YLVNGGGYTLQGLAIDP 141



 Score = 65.3 bits (157), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 13/124 (10%), Positives = 37/124 (29%)

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
           +        +       +               + K   +A + L + + S    + + +
Sbjct: 328 TVKTTELDQNGYPSGELVSIAVSENGRITGTYSNGKTVDLAQVSLATFNASDKLKKLDGT 387

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
             +            G  +     E SN +   E  ++I   Q + + T ++   ++ + 
Sbjct: 388 AFAATQESGEPMLGGGGDIIASAREASNVDIADEFSKLIVTQQAYTAGTRIVTTADELIR 447

Query: 236 EAIR 239
           E + 
Sbjct: 448 ETLN 451


>gi|332162901|ref|YP_004299478.1| Lateral flagellar hook protein [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325667131|gb|ADZ43775.1| Lateral flagellar hook protein [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330863351|emb|CBX73474.1| flagellar hook protein flgE [Yersinia enterocolitica W22703]
          Length = 397

 Score = 75.7 bits (184), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 64/132 (48%), Gaps = 6/132 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SF+I      A+ ++L+T+++N++N+ T GF++ + +F+ +         Q +    SG 
Sbjct: 2   SFSIANTGLSAVTEQLNTISNNIANSGTKGFKSGRTEFASMYAQ-----SQPLGVGVSGT 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122
               K+ GS   TG  +D A+ G+ +F +++       TR G F    +G LV+ASG   
Sbjct: 57  SQSIKKDGSIDRTGNAMDLAISGNGFFVVKNSSGDEAYTRAGMFTTDKNGVLVNASGMKL 116

Query: 123 VLDMASVPIQIP 134
               A     + 
Sbjct: 117 QGYPADAAGNVQ 128



 Score = 72.6 bits (176), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 23/155 (14%), Positives = 48/155 (30%), Gaps = 12/155 (7%)

Query: 92  LESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQK 151
                 I  T   +F      +   + G            +I     ++     G+   +
Sbjct: 250 DNYGIDITYTGTTQFHAEFLPAPSKSDGYTA---GTKNGERIENDGSVYATFSNGKQMLQ 306

Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANS 206
           GK++    L +     G   +  +  S           S  T     +  G LE SN + 
Sbjct: 307 GKLV----LANFANPNGLATQNGTTWSVTSRSGAPLLGSPGTGLLGNIVAGALEASNVDL 362

Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
             E+  ++   + + + T +I  N+  M    + +
Sbjct: 363 TAELVGLMTAQRNYQANTKIISTNDSMMNALFQVL 397


>gi|210135099|ref|YP_002301538.1| flagellar hook protein FlgE [Helicobacter pylori P12]
 gi|210133067|gb|ACJ08058.1| flagellar hook protein [Helicobacter pylori P12]
          Length = 605

 Score = 75.7 bits (184), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 56/146 (38%), Gaps = 22/146 (15%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56
           M  +     +     +  + ++++N++N +T+G+R+   +F  +  +  + ++ K     
Sbjct: 1   MNDTLLNAYSGIKTHQFGIDSLSNNIANVNTLGYRSNDPEFKTLFSSHLDALNAKSVVAN 60

Query: 57  ---SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---------------RGI 98
                V      LS + G ++ +  E   A +G  WF +                  +  
Sbjct: 61  DRNYGVTGSGNVLSNKDGEYMPSEGEFHMAYQGKGWFVIGPNKNGEMTINKDGFSKKQDN 120

Query: 99  ILTRDGRFKVTDDGSLVSASGKYPVL 124
            LTR G F    DG LV+  G Y   
Sbjct: 121 FLTRAGNFARDADGYLVTPEGYYVYG 146



 Score = 66.0 bits (159), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 34/103 (33%), Gaps = 16/103 (15%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS----------------GVTVKR 196
           + +A +G+ +    QG  +   +           E+                     ++ 
Sbjct: 500 EPVARIGILAFTNDQGLRKIGGNLYEMQEGTINGENRPLSGNPILGWDEEGKLKFGKIRH 559

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +LE SN N+   +  +I + + ++         +  + EAI 
Sbjct: 560 KYLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAIS 602


>gi|315586853|gb|ADU41234.1| flagellar hook protein [Helicobacter pylori 35A]
          Length = 605

 Score = 75.7 bits (184), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 56/146 (38%), Gaps = 22/146 (15%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56
           M  +     +     +  + ++++N++N +T+G+R+   +F  +  +  + ++ K     
Sbjct: 1   MNDTLLNAYSGIKTHQFGIDSLSNNIANVNTLGYRSNDPEFKTLFSSHLDALNAKSVVAN 60

Query: 57  ---SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---------------RGI 98
                V      LS + G ++ +  E   A +G  WF +                  +  
Sbjct: 61  DRNYGVTGSGNVLSNKDGEYMPSEGEFHMAYQGKGWFVIGPNKNGEITINKDGFSKKQDN 120

Query: 99  ILTRDGRFKVTDDGSLVSASGKYPVL 124
            LTR G F    DG LV+  G Y   
Sbjct: 121 FLTRAGNFARDADGYLVTPEGYYVYG 146



 Score = 66.0 bits (159), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 34/103 (33%), Gaps = 16/103 (15%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS----------------GVTVKR 196
           + +A +G+ +    QG  +   +           E+                     ++ 
Sbjct: 500 EPVARIGILAFTNDQGLRKIGGNLYEMQEGTINGENRPLSGNPILGWDEEGKLKFGKIRH 559

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +LE SN N+   +  +I + + ++         +  + EAI 
Sbjct: 560 KYLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAIS 602


>gi|217034408|ref|ZP_03439822.1| hypothetical protein HP9810_884g13 [Helicobacter pylori 98-10]
 gi|216943139|gb|EEC22611.1| hypothetical protein HP9810_884g13 [Helicobacter pylori 98-10]
          Length = 605

 Score = 75.7 bits (184), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 56/146 (38%), Gaps = 22/146 (15%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56
           M  +     +     +  + ++++N++N +T+G+R+   +F  +  +  + ++ K     
Sbjct: 1   MNDTLLNAYSGIKTHQFGIDSLSNNIANVNTLGYRSNDPEFKTLFSSHLDALNAKSVVAN 60

Query: 57  ---SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---------------RGI 98
                V      LS + G ++ +  E   A +G  WF +                  +  
Sbjct: 61  DRNYGVTGSGNVLSNKDGEYMPSEGEFHMAYQGKGWFVIGPNKNGEITINKDGFSKKQDN 120

Query: 99  ILTRDGRFKVTDDGSLVSASGKYPVL 124
            LTR G F    DG LV+  G Y   
Sbjct: 121 FLTRAGNFARDADGYLVTPEGYYVYG 146



 Score = 66.0 bits (159), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 34/103 (33%), Gaps = 16/103 (15%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS----------------GVTVKR 196
           + +A +G+ +    QG  +   +           E+                     ++ 
Sbjct: 500 EPVARIGILAFTNDQGLRKIGGNLYEMQEGTINGENRPLSGNPILGWDEEGKLKFGKIRH 559

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +LE SN N+   +  +I + + ++         +  + EAI 
Sbjct: 560 KYLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAIS 602


>gi|300936126|ref|ZP_07151065.1| flagellar hook protein FlgE [Escherichia coli MS 21-1]
 gi|300458704|gb|EFK22197.1| flagellar hook protein FlgE [Escherichia coli MS 21-1]
          Length = 400

 Score = 75.7 bits (184), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 40/187 (21%), Positives = 69/187 (36%), Gaps = 6/187 (3%)

Query: 7   IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66
           I      A+ ++L  +++N++N  TVG++++  +FS +         Q +    +G    
Sbjct: 5   IAATGLNAVNEQLDGISNNIANAGTVGYKSMTTQFSAMYA-----GSQAMGVSMAGTAQS 59

Query: 67  SKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125
               GS +STG  LD A+  D +F   +S   I  TR G F+   +G +V+ASG Y    
Sbjct: 60  ISRGGSLVSTGNALDLAINDDGFFVTCDSAGNISYTRAGSFETDKNGYIVNASGAYLQGY 119

Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185
                  +          + G I  +     T             R      + N     
Sbjct: 120 PVDDTGTLQTGTVTDIQIKTGNIPAQASSSLTFTANFDASDDAIDRTTVPFDATNSSSYT 179

Query: 186 LEDLSGV 192
               + V
Sbjct: 180 DSYTTTV 186



 Score = 68.4 bits (165), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 55/194 (28%), Gaps = 10/194 (5%)

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113
           Q            +  +    +TG            F  ++   I LT D          
Sbjct: 211 QYTFDGQQQTGVPATTLTFDPNTGKLTSPTTPQTIEFQTDAAAPIDLTVDYSTCTQYGSE 270

Query: 114 L-VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172
             V+ +            +Q+    +++     GE   +G+V+    L +     G    
Sbjct: 271 FSVTTNAADGYASATQNGVQVDDDGKVYATYSNGERMLQGQVV----LATFPNENGLEAV 326

Query: 173 ENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
             +                      T+  G LE SN +   E+  ++   + + + T +I
Sbjct: 327 SGTAWVQTGESGTPLIGVPGSGTCGTLSSGVLESSNVDITSELVNLMTAQRNYQANTKVI 386

Query: 228 DENEKSMLEAIRNI 241
             + +      + +
Sbjct: 387 ATSTQLDDALFQAM 400


>gi|167467491|ref|ZP_02332195.1| flagellar hook protein FlgE [Yersinia pestis FV-1]
          Length = 314

 Score = 75.7 bits (184), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 13/123 (10%), Positives = 35/123 (28%), Gaps = 5/123 (4%)

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
                 +       +            +Q+ +++  + + +    +G     ++      
Sbjct: 190 QNQTGYAAGEFTGFQINSDGSVVGTYSNQQTQLLGQIVMVNFSNPEGLSSEGDNVWKETQ 249

Query: 182 PPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                           T+  G LE SN +   E+  MI   + + S    I   ++ +  
Sbjct: 250 SSGNPTLGTAGSGGFGTLTSGALESSNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILQT 309

Query: 237 AIR 239
            + 
Sbjct: 310 LVS 312


>gi|254779511|ref|YP_003057617.1| flagellar hook protein FlgE [Helicobacter pylori B38]
 gi|254001423|emb|CAX29418.1| Flagellar hook protein FlgE [Helicobacter pylori B38]
          Length = 605

 Score = 75.7 bits (184), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 56/146 (38%), Gaps = 22/146 (15%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56
           M  +     +     +  + ++++N++N +T+G+R+   +F  +  +  + ++ K     
Sbjct: 1   MNDTLLNAYSGIKTHQFGIDSLSNNIANVNTLGYRSNDPEFKTLFSSHLDALNAKSVVAN 60

Query: 57  ---SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---------------RGI 98
                V      LS + G ++ +  E   A +G  WF +                  +  
Sbjct: 61  DRNYGVTGSGNVLSNKDGEYMPSEGEFHMAYQGKGWFVIGPNKNGEMTINKDGFSKKQDN 120

Query: 99  ILTRDGRFKVTDDGSLVSASGKYPVL 124
            LTR G F    DG LV+  G Y   
Sbjct: 121 FLTRAGNFARDADGYLVTPEGYYVYG 146



 Score = 66.0 bits (159), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 34/103 (33%), Gaps = 16/103 (15%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS----------------GVTVKR 196
           + +A +G+ +    QG  +   +           E+                     ++ 
Sbjct: 500 EPVARIGILAFTNDQGLRKIGGNLYEMQEGTINGENRPLSGNPILGWDEEGKLKFGKIRH 559

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +LE SN N+   +  +I + + ++         +  + EAI 
Sbjct: 560 KYLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAIS 602


>gi|82544458|ref|YP_408405.1| flagellar hook protein FlgE [Shigella boydii Sb227]
 gi|81245869|gb|ABB66577.1| hook protein [Shigella boydii Sb227]
 gi|320186977|gb|EFW61690.1| Flagellar hook protein FlgE [Shigella flexneri CDC 796-83]
 gi|332094030|gb|EGI99082.1| flagellar hook protein flgE [Shigella boydii 3594-74]
          Length = 402

 Score = 75.7 bits (184), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 71/195 (36%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ +LV+  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q+                K   T  +     S   +       + N  
Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNAD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 177 SYNKKGSVTVFDSQG 191



 Score = 73.0 bits (177), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 21/173 (12%), Positives = 55/173 (31%), Gaps = 6/173 (3%)

Query: 72  SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPI 131
            F + GT +D A+  +      +      T    F  +   +  + +      +      
Sbjct: 229 EFNANGTLVDGAMANNIATGAINGAEPA-TFSLSFLNSMQQNTGANNIVATPQNGYKPGD 287

Query: 132 QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PL 186
            +  +            +++ +++  + L +   ++G     ++  S             
Sbjct: 288 LVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTA 347

Query: 187 EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              +  T+  G LE SN +   E+  MI   + + S    I   ++ +   + 
Sbjct: 348 GTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400


>gi|317011118|gb|ADU84865.1| flagellar hook protein FlgE [Helicobacter pylori SouthAfrica7]
          Length = 605

 Score = 75.7 bits (184), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 56/146 (38%), Gaps = 22/146 (15%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56
           M  +     +     +  + ++++N++N +T+G+R+   +F  +  +  + ++ K     
Sbjct: 1   MNDTLLNAYSGIKTHQFGIDSLSNNIANVNTLGYRSNDPEFKTLFSSHLDALNAKSVVAN 60

Query: 57  ---SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---------------RGI 98
                V      LS + G ++ +  E   A +G  WF +                  +  
Sbjct: 61  DRNYGVTGSGNVLSNKDGEYMPSEGEFHMAYQGKGWFVIGPNKNGEMTINKDGFSKKQDN 120

Query: 99  ILTRDGRFKVTDDGSLVSASGKYPVL 124
            LTR G F    DG LV+  G Y   
Sbjct: 121 FLTRAGNFARDADGYLVTPEGYYVYG 146



 Score = 66.8 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 15/103 (14%), Positives = 37/103 (35%), Gaps = 16/103 (15%)

Query: 153 KVIATMGLYSVDMSQGFVRRENS----------GISPNIPPTPLEDL------SGVTVKR 196
           + +A +G+ +    QG  +   +          G +  +   P+             ++ 
Sbjct: 500 EPVARIGILAFTNDQGLRKIGGNVYEMQESTINGENRPLSGNPILGWDEEGKLKFGKIRH 559

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +LE SN N+   +  +I + + ++         +  + EAI 
Sbjct: 560 KYLETSNVNAGNALTNLILMQRGYSMNAKAFGAGDDMIKEAIS 602


>gi|330943208|gb|EGH45615.1| flagellar hook protein FlgE [Pseudomonas syringae pv. pisi str.
           1704B]
          Length = 565

 Score = 75.7 bits (184), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 47/118 (39%), Gaps = 3/118 (2%)

Query: 19  LSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFI---S 75
           +    +N++N  T+GF++ + +FS +  + +    Q           + +         S
Sbjct: 1   MEVAGNNIANVGTLGFKSSRAQFSALYASAQLGAGQHAVGDGVRLASVQQNFNQGETVIS 60

Query: 76  TGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQI 133
           +G  LD  ++G+ +F +     +  TR G F       +V + G       A+   +I
Sbjct: 61  SGNALDMRIQGNGFFVVSDQGSLAYTRAGAFLKDAANFVVDSDGGRLQGYAANDKGEI 118



 Score = 74.5 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 40/129 (31%), Gaps = 5/129 (3%)

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
           ++S     +D  S       +     +   G  +   K I  + L S     G   R ++
Sbjct: 435 TSSRSAAYVDGHSAGELKSLEVGRDGILRAGFTNGMTKSIGQVMLASFANPHGLQPRSDT 494

Query: 176 GISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
             +        E       +  ++  G LE SN     E+  +I     + + +  I   
Sbjct: 495 RWTATADSGVAEYDVPGVGTLGSIVSGALEGSNVVLADELIALIQAQTAYQANSKAISTE 554

Query: 231 EKSMLEAIR 239
              M   I+
Sbjct: 555 VTLMQTLIQ 563


>gi|91210228|ref|YP_540214.1| flagellar hook protein FlgE [Escherichia coli UTI89]
 gi|117623262|ref|YP_852175.1| flagellar hook protein FlgE [Escherichia coli APEC O1]
 gi|215486285|ref|YP_002328716.1| flagellar hook protein FlgE [Escherichia coli O127:H6 str.
           E2348/69]
 gi|218557958|ref|YP_002390871.1| flagellar hook protein FlgE [Escherichia coli S88]
 gi|237706938|ref|ZP_04537419.1| flagellar hook protein FlgE [Escherichia sp. 3_2_53FAA]
 gi|312968850|ref|ZP_07783057.1| flagellar hook protein flgE [Escherichia coli 2362-75]
 gi|91071802|gb|ABE06683.1| flagellar biosynthesis, hook protein [Escherichia coli UTI89]
 gi|115512386|gb|ABJ00461.1| flagellar biosynthesis, hook protein FlgE [Escherichia coli APEC
           O1]
 gi|215264357|emb|CAS08714.1| flagellar hook protein [Escherichia coli O127:H6 str. E2348/69]
 gi|218364727|emb|CAR02417.1| flagellar hook protein [Escherichia coli S88]
 gi|226898148|gb|EEH84407.1| flagellar hook protein FlgE [Escherichia sp. 3_2_53FAA]
 gi|294491293|gb|ADE90049.1| flagellar hook protein FlgE [Escherichia coli IHE3034]
 gi|307627454|gb|ADN71758.1| flagellar hook protein FlgE [Escherichia coli UM146]
 gi|312286252|gb|EFR14165.1| flagellar hook protein flgE [Escherichia coli 2362-75]
 gi|315287369|gb|EFU46780.1| flagellar hook protein FlgE [Escherichia coli MS 110-3]
 gi|323953238|gb|EGB49104.1| fagellar hook-basal body protein [Escherichia coli H252]
 gi|323957900|gb|EGB53612.1| fagellar hook-basal body protein [Escherichia coli H263]
          Length = 401

 Score = 75.7 bits (184), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 73/195 (37%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ +LV+  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q+                K   T  +     S   +   N+  + N  
Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDSLPSVNAFDASNAD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 177 SYNKKGSVTVFDSQG 191



 Score = 72.2 bits (175), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             +       +  +            +++ +++  + L +   ++G     ++  S    
Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 337

Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                       +  T+  G LE SN +   E+  MI   + + S    I   ++ +   
Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397

Query: 238 IR 239
           + 
Sbjct: 398 VN 399


>gi|82777309|ref|YP_403658.1| flagellar hook protein FlgE [Shigella dysenteriae Sd197]
 gi|309788143|ref|ZP_07682749.1| flagellar hook protein flgE [Shigella dysenteriae 1617]
 gi|81241457|gb|ABB62167.1| hook protein [Shigella dysenteriae Sd197]
 gi|308923995|gb|EFP69496.1| flagellar hook protein flgE [Shigella dysenteriae 1617]
          Length = 402

 Score = 75.7 bits (184), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 71/195 (36%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ +LV+  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q+                K   T  +     S   +       + N  
Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNAD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 177 SYNKKGSVTVFDSQG 191



 Score = 73.0 bits (177), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 21/173 (12%), Positives = 55/173 (31%), Gaps = 6/173 (3%)

Query: 72  SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPI 131
            F + GT +D A+  +      +      T    F  +   +  + +      +      
Sbjct: 229 KFNANGTLVDGAMANNIATGAINGAEPA-TFSLSFPNSMQQNTGANNIVATTQNGYKPGD 287

Query: 132 QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PL 186
            +  +            +++ +++  + L +   ++G     ++  S             
Sbjct: 288 LVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTA 347

Query: 187 EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              +  T+  G LE SN +   E+  MI   + + S    I   ++ +   + 
Sbjct: 348 GTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400


>gi|261838284|gb|ACX98050.1| flagellar hook protein [Helicobacter pylori 51]
          Length = 605

 Score = 75.7 bits (184), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 56/146 (38%), Gaps = 22/146 (15%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56
           M  +     +     +  + ++++N++N +T+G+R+   +F  +  +  + ++ K     
Sbjct: 1   MNDTLLNAYSGIKTHQFGIDSLSNNIANVNTLGYRSNDPEFKTLFSSHLDALNAKSVVAN 60

Query: 57  ---SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---------------RGI 98
                V      LS + G ++ +  E   A +G  WF +                  +  
Sbjct: 61  DRNYGVTGSGNVLSNKDGEYMPSEGEFHMAYQGKGWFVIGPNKNGEITINKDGFSKKQDN 120

Query: 99  ILTRDGRFKVTDDGSLVSASGKYPVL 124
            LTR G F    DG LV+  G Y   
Sbjct: 121 FLTRAGNFARDADGYLVTPEGYYVYG 146



 Score = 66.0 bits (159), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 34/103 (33%), Gaps = 16/103 (15%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS----------------GVTVKR 196
           + +A +G+ +    QG  +   +           E+                     ++ 
Sbjct: 500 EPVARIGILAFTNDQGLRKIGGNLYEMQEGTINGENRPLSGNPILGWDEEGKLKFGKIRH 559

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +LE SN N+   +  +I + + ++         +  + EAI 
Sbjct: 560 KYLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAIS 602


>gi|30062613|ref|NP_836784.1| flagellar hook protein FlgE [Shigella flexneri 2a str. 2457T]
 gi|161485924|ref|NP_706995.2| flagellar hook protein FlgE [Shigella flexneri 2a str. 301]
 gi|30040859|gb|AAP16590.1| flagellar hook protein FlgE [Shigella flexneri 2a str. 2457T]
 gi|313650473|gb|EFS14880.1| flagellar hook protein flgE [Shigella flexneri 2a str. 2457T]
 gi|332758235|gb|EGJ88558.1| flagellar hook protein flgE [Shigella flexneri 4343-70]
 gi|333005591|gb|EGK25109.1| flagellar hook protein flgE [Shigella flexneri K-218]
          Length = 402

 Score = 75.7 bits (184), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 70/195 (35%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ +L++  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLLNTQGLQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
                +      Q+                K   T  +     S   +       + N  
Sbjct: 117 TGYPVTGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNAD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 177 SYNKKGSVTVFDSQG 191



 Score = 69.1 bits (167), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 21/173 (12%), Positives = 55/173 (31%), Gaps = 6/173 (3%)

Query: 72  SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPI 131
            F + GT +D A+  +      +      T    F  +   +  + +      +      
Sbjct: 229 EFNANGTLVDGAMANNIATGAINGAEPA-TFSLSFLNSMQQNTGANNIVATTQNGYKPGD 287

Query: 132 QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PL 186
            +  +            +++ +++  + L +   ++G     ++  S             
Sbjct: 288 LVSYQINDDGTVVGNNSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTA 347

Query: 187 EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              +  T+  G LE SN +   E+  MI   + + S    I   ++ +   + 
Sbjct: 348 GTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYKSNAQTIKTQDQILNTRVN 400


>gi|324113871|gb|EGC07845.1| fagellar hook-basal body protein [Escherichia fergusonii B253]
 gi|325497616|gb|EGC95475.1| flagellar hook protein FlgE [Escherichia fergusonii ECD227]
          Length = 401

 Score = 75.7 bits (184), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 72/195 (36%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ +LV+  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDIAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q+                K   T  +     S   +    +  + N  
Sbjct: 117 TGYPAAGTPPTIQQGANPTNISIPNTLMAAKTTTTAAMQINLNSSDPLPTVKAFDASNAD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 177 SYNKKGSVTVFDSQG 191



 Score = 72.6 bits (176), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             +       +  +            +++ +++  + L +   ++G     ++  S    
Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQA 337

Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                       +  T+  G LE SN +   E+  MI   + + S    I   ++ +   
Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397

Query: 238 IR 239
           + 
Sbjct: 398 VN 399


>gi|317009564|gb|ADU80144.1| flagellar hook protein FlgE [Helicobacter pylori India7]
          Length = 605

 Score = 75.7 bits (184), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 56/146 (38%), Gaps = 22/146 (15%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56
           M  +     +     +  + ++++N++N +T+G+R+   +F  +  +  + ++ K     
Sbjct: 1   MNDTLLNAYSGIKTHQFGIDSLSNNIANVNTLGYRSNDPEFKTLFSSHLDALNAKSVVAN 60

Query: 57  ---SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---------------RGI 98
                V      LS + G ++ +  E   A +G  WF +                  +  
Sbjct: 61  DRNYGVTGSGNVLSNKDGEYMPSEGEFHMAYQGKGWFVIGPNKNGEMTINKDGFSKKQDN 120

Query: 99  ILTRDGRFKVTDDGSLVSASGKYPVL 124
            LTR G F    DG LV+  G Y   
Sbjct: 121 FLTRAGNFARDADGYLVTPEGYYVYG 146



 Score = 66.0 bits (159), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 34/103 (33%), Gaps = 16/103 (15%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS----------------GVTVKR 196
           + +A +G+ +    QG  +   +           E+                     ++ 
Sbjct: 500 EPVARIGILAFTNDQGLRKIGGNLYEMQEGTINGENRPLSGNPILGWDEEGKLKFGKIRH 559

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +LE SN N+   +  +I + + ++         +  + EAI 
Sbjct: 560 KYLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAIS 602


>gi|293605003|ref|ZP_06687399.1| flagellar hook protein FlgE [Achromobacter piechaudii ATCC 43553]
 gi|292816608|gb|EFF75693.1| flagellar hook protein FlgE [Achromobacter piechaudii ATCC 43553]
          Length = 489

 Score = 75.7 bits (184), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 33/155 (21%), Positives = 64/155 (41%), Gaps = 7/155 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
            F  GL+   A  Q L  + +N++N+ TVGF++    F++V  + +  +      V    
Sbjct: 2   GFGQGLSGLNAAAQNLDVIGNNIANSGTVGFKSATASFADVYASSRVGL-----GVKVAA 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRG--IILTRDGRFKVTDDGSLVSASGKY 121
                 VG+    G E D A++G       + +   ++ +R+G F V  +  +V+A G  
Sbjct: 57  INQRFTVGTVQGGGGEYDIAIDGAKGMFRLTDQSGAVMYSRNGEFLVDKNNFIVNAQGYR 116

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156
                A      P + ++       + +  G  +A
Sbjct: 117 LTGYPAGAIGANPVELQLPTANVAPKATATGTTVA 151



 Score = 71.1 bits (172), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 15/98 (15%), Positives = 31/98 (31%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLED 201
             + + +V+  + L      QG     N+  +              T     V     E 
Sbjct: 390 YTNGETQVVGNIVLADFSNLQGLQPVGNNAWTETSASGQPILGQPGTNGMSRVVGQATEA 449

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E+  MI   + + + +  I   ++ M   + 
Sbjct: 450 SNVDMSKELVNMIIAQRTYQANSQTIKTQDEIMQVLMN 487


>gi|200390428|ref|ZP_03217039.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|199602873|gb|EDZ01419.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
          Length = 403

 Score = 75.3 bits (183), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 71/195 (36%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SF+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   SFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ +LV+  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGMQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q+                K   T  +     S   V  +      +  
Sbjct: 117 TGYPATGTPPTIQQGANPAPITIPNTLMAAKSTTTASMQINLNSTDPVPSKTPFSVSDAD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 177 SYNKKGTVTVYDSQG 191



 Score = 74.1 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 13/122 (10%), Positives = 39/122 (31%), Gaps = 5/122 (4%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             +       +  +            +++ +V+  + L +   ++G   + ++  +    
Sbjct: 280 NQNGYKPGDLVSYQINNDGTVVGNYSNEQEQVLGQIVLANFANNEGLASQGDNVWAATQA 339

Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                       +   +  G LE SN +   E+  MI   + + S    I   ++ +   
Sbjct: 340 SGVALLGTAGSGNFGKLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 399

Query: 238 IR 239
           + 
Sbjct: 400 VN 401


>gi|301023263|ref|ZP_07187060.1| flagellar hook protein FlgE [Escherichia coli MS 69-1]
 gi|300397108|gb|EFJ80646.1| flagellar hook protein FlgE [Escherichia coli MS 69-1]
          Length = 401

 Score = 75.3 bits (183), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 72/195 (36%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ +LV+  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q+                K   T  +     S   +    +  + N  
Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPSVKAFDASNAD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 177 SYNKKGSVTVFDSQG 191



 Score = 72.6 bits (176), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             +       +  +            +++ +++  + L +   ++G     ++  S    
Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 337

Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                       +  T+  G LE SN +   E+  MI   + + S    I   ++ +   
Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397

Query: 238 IR 239
           + 
Sbjct: 398 VN 399


>gi|332673746|gb|AEE70563.1| flagellar hook [Helicobacter pylori 83]
          Length = 605

 Score = 75.3 bits (183), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 56/146 (38%), Gaps = 22/146 (15%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56
           M  +     +     +  + ++++N++N +T+G+R+   +F  +  +  + ++ K     
Sbjct: 1   MNDTLLNAYSGIKTHQFGIDSLSNNIANVNTLGYRSNDPEFKTLFSSHLDALNAKSVVAN 60

Query: 57  ---SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---------------RGI 98
                V      LS + G ++ +  E   A +G  WF +                  +  
Sbjct: 61  DRNYGVTGSGNVLSNKDGEYMPSEGEFHMAYQGKGWFVIGPNKNGEMTINKDGFSKKQDN 120

Query: 99  ILTRDGRFKVTDDGSLVSASGKYPVL 124
            LTR G F    DG LV+  G Y   
Sbjct: 121 FLTRAGNFARDADGYLVTPEGYYVYG 146



 Score = 66.0 bits (159), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 34/103 (33%), Gaps = 16/103 (15%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS----------------GVTVKR 196
           + +A +G+ +    QG  +   +           E+                     ++ 
Sbjct: 500 EPVARIGILAFTNDQGLRKIGGNLYEMQEGTINGENRPLSGNPILGWDEEGKLKFGKIRH 559

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +LE SN N+   +  +I + + ++         +  + EAI 
Sbjct: 560 KYLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAIS 602


>gi|153948570|ref|YP_001399634.1| flagellar hook protein FlgE [Yersinia pseudotuberculosis IP 31758]
 gi|152960065|gb|ABS47526.1| flagellar hook protein flgE [Yersinia pseudotuberculosis IP 31758]
          Length = 402

 Score = 75.3 bits (183), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 57/132 (43%), Gaps = 6/132 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SF+I   A  A  ++L+T+++N++N+ T GF+  + +F+ +         Q +    SG 
Sbjct: 2   SFSIANTALNAHTEQLNTISNNIANSATKGFKASRTEFASMYAQ-----SQPLGVTVSGV 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122
                + G    TG  LD A+ G  +F +         TR G F+   DG LV+  G   
Sbjct: 57  SQNIGKDGQKDKTGMGLDLAISGGGFFVVRENSGDKAYTRAGMFRSDVDGYLVNGQGMKL 116

Query: 123 VLDMASVPIQIP 134
               A     I 
Sbjct: 117 QGYPADDAGNIQ 128



 Score = 68.0 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/140 (15%), Positives = 49/140 (35%), Gaps = 9/140 (6%)

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
              + G   + +             +I     ++     GE   +GKV+    L +    
Sbjct: 267 TQLNQGFTTTRNKSDGYTSGVKNGERIESDGSVYATFSNGERMLQGKVV----LANFASP 322

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFN 221
            G V +  +  S +         +  T     ++ G LE+SN +   E+  ++   + + 
Sbjct: 323 SGLVTQNGTSWSESNKSGAALLGTPGTGLLGSLESGALENSNVDITAELVGLMTAQRNYQ 382

Query: 222 SITTLIDENEKSMLEAIRNI 241
           + T +I  N+  M    + +
Sbjct: 383 ASTKIISTNDSMMNALFQVL 402


>gi|167567750|ref|ZP_02360666.1| flagellar hook protein flgE [Burkholderia oklahomensis EO147]
          Length = 395

 Score = 75.3 bits (183), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 39/197 (19%), Positives = 76/197 (38%), Gaps = 7/197 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SFNI L+   A+  +L+T++ N++NT T GF++ +  F+ +V   + +     S   +  
Sbjct: 2   SFNIALSGINAVNNQLNTISHNIANTGTYGFKSGRANFATMVAGAQPNGTYIGSITQNVG 61

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122
                  GS + TG  LD A++ D +F  +     ++ TR G F+   DG +V   G+  
Sbjct: 62  IG-----GSIMKTGRGLDAAIQQDGFFVTKDADGSLLYTRVGIFQRAADGYMVDGFGRRV 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+  +   Q        +  +  +    ++          +     + S       
Sbjct: 117 QGYAANGVLGDLQVPNTVEPAKASDSIEYAGNLSADWKVP-KNPKFDKDDDTSFNHSVST 175

Query: 183 PTPLEDLSGVTVKRGFL 199
                      V + F+
Sbjct: 176 TVYDSLGRKHVVTQYFV 192



 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 20/148 (13%), Positives = 49/148 (33%), Gaps = 10/148 (6%)

Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-----EISQKGKVIATM 158
           G+  V  + + V   G        +            ++ EKG       + + + + T+
Sbjct: 248 GKLVVNVNYTGVMQVGGDSSTTTNNQNGYAAGTPGEPSIDEKGNVVVQYSNGQKRTVGTV 307

Query: 159 GLYSVDMSQGFVRRENSGI-SPNIPPTP----LEDLSGVTVKRGFLEDSNANSMYEMGQM 213
            L +   + G     ++   +      P            +    LE SNA+   E+  M
Sbjct: 308 ALAAFASADGLTAVGDTAWKASTASGNPLYGTPGSGMFSKLATASLEMSNADVTRELVDM 367

Query: 214 IHLTQKFNSITTLIDENEKSMLEAIRNI 241
           +   + + + + +I    + M   ++ +
Sbjct: 368 MSAQRNYQANSKVIATENQMMQSLMQAL 395


>gi|16129039|ref|NP_415594.1| flagellar hook protein [Escherichia coli str. K-12 substr. MG1655]
 gi|89107922|ref|AP_001702.1| flagellar hook protein [Escherichia coli str. K-12 substr. W3110]
 gi|170080727|ref|YP_001730047.1| flagellar hook protein [Escherichia coli str. K-12 substr. DH10B]
 gi|188492271|ref|ZP_02999541.1| flagellar hook protein FlgE [Escherichia coli 53638]
 gi|238900330|ref|YP_002926126.1| flagellar hook protein [Escherichia coli BW2952]
 gi|256023226|ref|ZP_05437091.1| flagellar hook protein FlgE [Escherichia sp. 4_1_40B]
 gi|300950171|ref|ZP_07164116.1| flagellar hook protein FlgE [Escherichia coli MS 116-1]
 gi|300954384|ref|ZP_07166838.1| flagellar hook protein FlgE [Escherichia coli MS 175-1]
 gi|301029709|ref|ZP_07192763.1| flagellar hook protein FlgE [Escherichia coli MS 196-1]
 gi|301644988|ref|ZP_07244954.1| flagellar hook protein FlgE [Escherichia coli MS 146-1]
 gi|307137711|ref|ZP_07497067.1| flagellar hook protein FlgE [Escherichia coli H736]
 gi|331641620|ref|ZP_08342755.1| flagellar hook protein FlgE [Escherichia coli H736]
 gi|2494529|sp|P75937|FLGE_ECOLI RecName: Full=Flagellar hook protein flgE
 gi|1787316|gb|AAC74160.1| flagellar hook protein [Escherichia coli str. K-12 substr. MG1655]
 gi|85674830|dbj|BAA35885.2| flagellar hook protein [Escherichia coli str. K12 substr. W3110]
 gi|169888562|gb|ACB02269.1| flagellar hook protein [Escherichia coli str. K-12 substr. DH10B]
 gi|188487470|gb|EDU62573.1| flagellar hook protein FlgE [Escherichia coli 53638]
 gi|238861108|gb|ACR63106.1| flagellar hook protein [Escherichia coli BW2952]
 gi|260449784|gb|ACX40206.1| flagellar basal body FlaE domain protein [Escherichia coli DH1]
 gi|299877397|gb|EFI85608.1| flagellar hook protein FlgE [Escherichia coli MS 196-1]
 gi|300318620|gb|EFJ68404.1| flagellar hook protein FlgE [Escherichia coli MS 175-1]
 gi|300450518|gb|EFK14138.1| flagellar hook protein FlgE [Escherichia coli MS 116-1]
 gi|301076717|gb|EFK91523.1| flagellar hook protein FlgE [Escherichia coli MS 146-1]
 gi|309701348|emb|CBJ00649.1| flagellar hook protein FlgE [Escherichia coli ETEC H10407]
 gi|315135708|dbj|BAJ42867.1| flagellar hook protein FlgE [Escherichia coli DH1]
 gi|315618246|gb|EFU98836.1| flagellar hook protein flgE [Escherichia coli 3431]
 gi|323937816|gb|EGB34080.1| fagellar hook-basal body protein [Escherichia coli E1520]
 gi|323942545|gb|EGB38712.1| fagellar hook-basal body protein [Escherichia coli E482]
 gi|331038418|gb|EGI10638.1| flagellar hook protein FlgE [Escherichia coli H736]
 gi|332342622|gb|AEE55956.1| flagellar hook protein FlgE [Escherichia coli UMNK88]
          Length = 402

 Score = 75.3 bits (183), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 71/195 (36%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ +LV+  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q+                K   T  +     S   +       + N  
Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNAD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 177 SYNKKGSVTVFDSQG 191



 Score = 72.6 bits (176), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 21/173 (12%), Positives = 55/173 (31%), Gaps = 6/173 (3%)

Query: 72  SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPI 131
            F + GT +D A+  +      +      T    F  +   +  + +      +      
Sbjct: 229 EFNANGTLVDGAMANNIATGAINGAEPA-TFSLSFLNSMQQNTGANNIVATTQNGYKPGD 287

Query: 132 QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PL 186
            +  +            +++ +++  + L +   ++G     ++  S             
Sbjct: 288 LVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTA 347

Query: 187 EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              +  T+  G LE SN +   E+  MI   + + S    I   ++ +   + 
Sbjct: 348 GTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400


>gi|291334032|gb|ADD93707.1| flagellar basal body FlaE domain protein [uncultured marine
           bacterium MedDCM-OCT-S04-C749]
          Length = 210

 Score = 75.3 bits (183), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 39/201 (19%), Positives = 66/201 (32%), Gaps = 31/201 (15%)

Query: 70  VGSFISTGTELDFALEGDAWFALESPRGII--LTRDGRFKVTDDGSLVSASGKYPVLDM- 126
            GS I T    D AL G+  F L++P  +    TR+G F + D G L S++  + +    
Sbjct: 10  QGSIIDTDNRTDLALLGNGMFILKNPNSVTPSFTRNGTFSLDDAGFLRSSNDAFVMGSPL 69

Query: 127 -----------------------ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
                                           +       E    ++    ++T+ L   
Sbjct: 70  VDGLFGPTPAELDGLSPIQIQLKREDVPMSELRILGDGRIEASYGTEVSYPVSTVALGVF 129

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
             + G         +       +           ++K G LE SN N   E+  MI   Q
Sbjct: 130 SNNNGLKELGGGIYAQTDKSGAVNLGAPADLGYASLKSGGLEASNVNITDELTAMIKAQQ 189

Query: 219 KFNSITTLIDENEKSMLEAIR 239
           +FN    L+  N + + +  R
Sbjct: 190 QFNGSARLMQTNSEMVEKLTR 210


>gi|207092210|ref|ZP_03239997.1| flagellar hook protein FlgE [Helicobacter pylori HPKX_438_AG0C1]
          Length = 605

 Score = 75.3 bits (183), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 56/146 (38%), Gaps = 22/146 (15%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56
           M  +     +     +  + ++++N++N +T+G+R+   +F  +  +  + ++ K     
Sbjct: 1   MNDTLLNAYSGIKTHQFGIDSLSNNIANVNTLGYRSNDPEFKTLFSSHLDALNAKSVVAN 60

Query: 57  ---SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---------------RGI 98
                V      LS + G ++ +  E   A +G  WF +                  +  
Sbjct: 61  DRNYGVTGSGNTLSNKDGEYMPSEGEFHMAYQGKGWFVIGPNKNGEMTINKDGFSKKQDN 120

Query: 99  ILTRDGRFKVTDDGSLVSASGKYPVL 124
            LTR G F    DG LV+  G Y   
Sbjct: 121 FLTRAGNFARDADGYLVTPEGYYVYG 146



 Score = 65.7 bits (158), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 34/103 (33%), Gaps = 16/103 (15%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS----------------GVTVKR 196
           + +A +G+ +    QG  +   +           E+                     ++ 
Sbjct: 500 EPVARIGILAFTNDQGLRKIGGNLYEMQEGTINGENRPLSGNPILGWDEEGKLKFGKIRH 559

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +LE SN N+   +  +I + + ++         +  + EAI 
Sbjct: 560 KYLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAIS 602


>gi|170681389|ref|YP_001742373.1| lateral flagellar hook protein LfgE [Escherichia coli SMS-3-5]
 gi|170519107|gb|ACB17285.1| lateral flagellar hook protein LfgE [Escherichia coli SMS-3-5]
          Length = 400

 Score = 75.3 bits (183), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 40/187 (21%), Positives = 69/187 (36%), Gaps = 6/187 (3%)

Query: 7   IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66
           I      A+ ++L  +++N++N  TVG++++  +FS +         Q +    +G    
Sbjct: 5   IAATGLNAVNEQLDGISNNIANAGTVGYKSMTTQFSAMYA-----GSQAMGVSVAGTAQS 59

Query: 67  SKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125
               GS +STG  LD A+  D +F   +S   I  TR G F+   +G +V+ASG Y    
Sbjct: 60  ISRGGSLVSTGNALDLAINDDGFFVTCDSAGNISYTRAGSFETDKNGYIVNASGAYLQGY 119

Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185
                  +          + G I  +     T             R      + N     
Sbjct: 120 PVDDTGTLQTGTVTDIQIKTGNIPAQASSSLTFTANFDASDDAIDRTTVPFDATNSSSYT 179

Query: 186 LEDLSGV 192
               + V
Sbjct: 180 DSYTTTV 186



 Score = 68.7 bits (166), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 55/194 (28%), Gaps = 10/194 (5%)

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113
           Q            +  +    +TG            F  ++   I LT D          
Sbjct: 211 QYTFDGQQQTGVPATTLTFDPNTGKLTSPTTPQTIEFQTDAAAPIDLTVDYSTCTQYGSE 270

Query: 114 L-VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172
             V+ +            +Q+    +++     GE   +G+V+    L +     G    
Sbjct: 271 FSVTTNAANGYASATQNGVQVDDDGKVYATYSNGERMLQGQVV----LATFPNENGLEAV 326

Query: 173 ENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
             +                      T+  G LE SN +   E+  ++   + + + T +I
Sbjct: 327 SGTAWVQTGESGTPLIGVPGSGSCGTLSSGVLESSNVDITSELVNLMTAQRNYQANTKVI 386

Query: 228 DENEKSMLEAIRNI 241
             + +      + +
Sbjct: 387 ATSTQLDDALFQAM 400


>gi|307310146|ref|ZP_07589796.1| fagellar hook-basal body protein [Escherichia coli W]
 gi|306909864|gb|EFN40358.1| fagellar hook-basal body protein [Escherichia coli W]
 gi|315060354|gb|ADT74681.1| flagellar hook protein [Escherichia coli W]
 gi|320200972|gb|EFW75556.1| Flagellar hook protein FlgE [Escherichia coli EC4100B]
 gi|323379085|gb|ADX51353.1| fagellar hook-basal body protein [Escherichia coli KO11]
          Length = 402

 Score = 75.3 bits (183), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 71/195 (36%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ +LV+  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q+                K   T  +     S   +       + N  
Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNAD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 177 SYNKKGSVTVFDSQG 191



 Score = 72.6 bits (176), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 21/173 (12%), Positives = 55/173 (31%), Gaps = 6/173 (3%)

Query: 72  SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPI 131
            F + GT +D A+  +      +      T    F  +   +  + +      +      
Sbjct: 229 EFNANGTLVDGAMANNIATGAINGADPA-TFSLSFLNSMQQNTGANNIVATTQNGYKPGD 287

Query: 132 QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PL 186
            +  +            +++ +++  + L +   ++G     ++  S             
Sbjct: 288 LVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTA 347

Query: 187 EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              +  T+  G LE SN +   E+  MI   + + S    I   ++ +   + 
Sbjct: 348 GTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400


>gi|256020228|ref|ZP_05434093.1| flagellar basal body FlaE domain-containing protein [Shigella sp.
           D9]
 gi|332281390|ref|ZP_08393803.1| lateral flagellar hook protein [Shigella sp. D9]
 gi|332103742|gb|EGJ07088.1| lateral flagellar hook protein [Shigella sp. D9]
          Length = 400

 Score = 75.3 bits (183), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 40/187 (21%), Positives = 69/187 (36%), Gaps = 6/187 (3%)

Query: 7   IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66
           I      A+ ++L  +++N++N  TVG++++  +FS +         Q +    +G    
Sbjct: 5   IAATGLNAVNEQLDGISNNIANAGTVGYKSMTTQFSAMYA-----GSQAMGVSVAGTAQS 59

Query: 67  SKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125
               GS +STG  LD A+  D +F   +S   I  TR G F+   +G +V+ASG Y    
Sbjct: 60  ISRGGSLVSTGNALDLAINDDGFFVTCDSAGNISYTRAGSFETDKNGYIVNASGAYLQGY 119

Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185
                  +          + G I  +     T             R      + N     
Sbjct: 120 PVDDTGTLQTGTVTDIQIKTGNIPAQASSSLTFTANFDASDDAIDRTTVPFDATNSSSYT 179

Query: 186 LEDLSGV 192
               + V
Sbjct: 180 DSYTTTV 186



 Score = 68.7 bits (166), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 55/194 (28%), Gaps = 10/194 (5%)

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113
           Q            +  +    +TG            F  ++   I LT D          
Sbjct: 211 QYTFDGQQQTGVPATTLTFDPNTGKLTSPTTPQTIEFQTDAAAPIDLTVDYSTCTQYGSE 270

Query: 114 L-VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172
             V+ +            +Q+    +++     GE   +G+V+    L +     G    
Sbjct: 271 FSVTTNAANGYASATQNGVQVDDDGKVYATYSNGERMLQGQVV----LATFPNENGLEAV 326

Query: 173 ENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
             +                      T+  G LE SN +   E+  ++   + + + T +I
Sbjct: 327 SGTAWVQTGESGTPLIGVPGSGTCGTLSSGVLESSNVDITSELVNLMTAQRNYQANTKVI 386

Query: 228 DENEKSMLEAIRNI 241
             + +      + +
Sbjct: 387 ATSTQLDDALFQAM 400


>gi|153953785|ref|YP_001394550.1| hypothetical protein CKL_1160 [Clostridium kluyveri DSM 555]
 gi|219854401|ref|YP_002471523.1| hypothetical protein CKR_1058 [Clostridium kluyveri NBRC 12016]
 gi|146346666|gb|EDK33202.1| FlgE [Clostridium kluyveri DSM 555]
 gi|219568125|dbj|BAH06109.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 348

 Score = 75.3 bits (183), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 74/204 (36%), Gaps = 15/204 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  S   G++   A +Q+L+ + +N++N+ T  ++T  + F +++    +D         
Sbjct: 1   MLPSMYSGISGLRANQQKLNVIGNNIANSSTTAYKTQSMNFQDMISQNLSDPSAPSTSIG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                Q    V           GS  +T   LDFA++G  +F + + +    + D    +
Sbjct: 61  GVNGKQSGLGVQVAGISTDFTTGSMGTTNRNLDFAIDGTGYFVVGTGKLGETSDDTGISI 120

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
            +D +++   G        ++     +    +   +   I+Q G  +    +   + +  
Sbjct: 121 DEDNNIL---GGGDNEVENTIEAHYSRDGSFYLDTQGNLINQNGYRVMGYLVTDENNTST 177

Query: 169 FVRRENSGISPNIPPTPLEDLSGV 192
               +N             D +G 
Sbjct: 178 ITYLQNDTEDTFQNAVQFVDANGT 201



 Score = 72.6 bits (176), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 16/97 (16%), Positives = 33/97 (34%), Gaps = 11/97 (11%)

Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----------EDLSGVTVKRGFLEDS 202
           V+  + + S     G V+   +  + +                        + +GFLE S
Sbjct: 249 VLGQIAMVSFQNEGGLVKEGGNLYTTSSNSGQPIVMSGKGAENDNSAGYGKITQGFLEMS 308

Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           N +   +   MI  T+ F +   +I   +  + + I 
Sbjct: 309 NVDLAQQFTDMIVATRAFQANGKMITNGDTILEDLIN 345


>gi|116694219|ref|YP_728430.1| flagellar hook protein FlgE [Ralstonia eutropha H16]
 gi|113528718|emb|CAJ95065.1| flagellar hook protein [Ralstonia eutropha H16]
          Length = 408

 Score = 75.3 bits (183), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 7/128 (5%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
            F  G++   A    L  + +N++N +TVG++    +F++V    K         V    
Sbjct: 2   GFGQGVSGLNAAASNLDVIGNNIANANTVGYKQSAAQFADVYAGTK-----IGLGVRVNS 56

Query: 64  EYLSKEVGSFISTGTELDFAL-EGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKY 121
              S   G+  ++G  LD A+  G+ +F L SP   +  +R+G+F+  +DG + +  G  
Sbjct: 57  VVQSFNQGNIEASGRSLDVAITNGNGFFRLTSPEGAVYYSRNGQFQRQEDGRITNMQGLQ 116

Query: 122 PVLDMASV 129
                A V
Sbjct: 117 VTGYPAGV 124



 Score = 69.9 bits (169), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 18/212 (8%), Positives = 52/212 (24%), Gaps = 14/212 (6%)

Query: 42  SEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101
            +++               +       +V      G  +  A +        +   I L+
Sbjct: 196 QQLMAYFAKSAGAPTVAGGTDWRMYVTDVNGNAVGGAPVTLAFDNAGALQSPAAGAITLS 255

Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEI----------FNVGEKGEISQK 151
           +            +  +G         V                             +++
Sbjct: 256 QPAANGAQAMAMKLDLTGTTQFGADNDVKQLSQNGYTSGSLLGFSVNGDGTITGNYSNEQ 315

Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPL----EDLSGVTVKRGFLEDSNANSM 207
            K +  + + +    +G     ++  S               S  T++   +E SN +  
Sbjct: 316 TKPLGQIVMAAFGNVEGLKPEGDNVWSATGASGQALVGVAGGSMGTLRSNAVEASNVDLS 375

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            ++  +I   + + +    I   +  M   + 
Sbjct: 376 GQLVNLIVAQRNYQANAQTIKAQDTVMQTLVN 407


>gi|238758110|ref|ZP_04619290.1| Flagellar hook protein FlgE [Yersinia aldovae ATCC 35236]
 gi|238703648|gb|EEP96185.1| Flagellar hook protein FlgE [Yersinia aldovae ATCC 35236]
          Length = 428

 Score = 75.3 bits (183), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 23/214 (10%), Positives = 55/214 (25%), Gaps = 5/214 (2%)

Query: 31  TVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF 90
           TV  +       +V            S   +     +  + S   TG+            
Sbjct: 213 TVYTKDSSATLKDVTKPYDPTDPAAASARGTMVFDTNGALKSVTPTGSTTSTTDFNMTIP 272

Query: 91  ALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ 150
                     T D     +   +  + S         +       +            +Q
Sbjct: 273 MGVVNGAPAQTFDLNVAGSKQQNTGTDSITAQNQTGYAAGEFTGFQVNKDGSVVGTYSNQ 332

Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNAN 205
           + +++  + L +    +G   + ++                      ++  G LE SN +
Sbjct: 333 QTQLLGQIVLVNFSNPEGLASQGDNVWKETQSSGNPILGTAGGGGFGSLTSGALESSNVD 392

Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              E+  MI   + + S    I   ++ +   + 
Sbjct: 393 LSKELVNMIVAQRNYQSNAQTIKTQDQILQTLVN 426



 Score = 74.5 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 66/191 (34%), Gaps = 8/191 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
            F+  ++   A    L  + +N++N+ T GF+   V F+++         Q    V    
Sbjct: 2   GFSQAVSGLNAASSNLDVIGNNIANSATSGFKAGSVSFADMFA-----GSQTGMGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASGKYP 122
                  G+  +T   LD A+  + +F ++   G +   R+G+FK+ ++ ++V+  G   
Sbjct: 57  ITQDFNDGTPTTTNRRLDLAISQNGFFRMQDSSGGVYFARNGQFKLDENRNIVNMQG--L 114

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
            L         P   +  N              AT     V       +       P  P
Sbjct: 115 SLTGYPATGTPPTVQQGANPVPLSIPQDMITAKATTSGNMVANLTSTHKVITDAFDPQKP 174

Query: 183 PTPLEDLSGVT 193
            T     +  T
Sbjct: 175 DTYSFVNNMTT 185


>gi|188527733|ref|YP_001910420.1| flagellar hook protein FlgE [Helicobacter pylori Shi470]
 gi|188143973|gb|ACD48390.1| flagellar hook protein FlgE [Helicobacter pylori Shi470]
          Length = 605

 Score = 75.3 bits (183), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 56/146 (38%), Gaps = 22/146 (15%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56
           M  +     +     +  + ++++N++N +T+G+R+   +F  +  +  + ++ K     
Sbjct: 1   MNDTLLNAYSGIKTHQFGIDSLSNNIANVNTLGYRSNDPEFKTLFSSHLDALNAKSVVAN 60

Query: 57  ---SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---------------RGI 98
                V      LS + G ++ +  E   A +G  WF +                  +  
Sbjct: 61  DRNYGVTGSGNVLSNKDGEYMPSEGEFHMAYQGKGWFVIGPNKNGEITINKNGFSKKQDN 120

Query: 99  ILTRDGRFKVTDDGSLVSASGKYPVL 124
            LTR G F    DG LV+  G Y   
Sbjct: 121 FLTRAGNFARDADGYLVTPEGYYVYG 146



 Score = 65.7 bits (158), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 34/103 (33%), Gaps = 16/103 (15%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS----------------GVTVKR 196
           + +A +G+ +    QG  +   +           E+                     ++ 
Sbjct: 500 EPVARIGILAFTNDQGLRKIGGNLYEMQEGTINGENRPLSGNPILGWDEEGKLKFGKIRH 559

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +LE SN N+   +  +I + + ++         +  + EAI 
Sbjct: 560 KYLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAIS 602


>gi|167574701|ref|ZP_02367575.1| flagellar hook protein flgE [Burkholderia oklahomensis C6786]
          Length = 395

 Score = 75.3 bits (183), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 39/197 (19%), Positives = 76/197 (38%), Gaps = 7/197 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SFNI L+   A+  +L+T++ N++NT T GF++ +  F+ +V   + +     S   +  
Sbjct: 2   SFNIALSGINAVNNQLNTISHNIANTGTYGFKSGRANFATMVAGAQPNGTYIGSITQNVG 61

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122
                  GS + TG  LD A++ D +F  +     ++ TR G F+   DG +V   G+  
Sbjct: 62  IG-----GSIMKTGRGLDAAIQQDGFFVTKDADGSLLYTRVGIFQRAADGYMVDGFGRRV 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+  +   Q        +  +  +    ++          +     + S       
Sbjct: 117 QGYAANGVLGDLQVPNTVEPAKASDSIEYAGNLSADWKVP-KNPKFDKDDDTSFNHSVST 175

Query: 183 PTPLEDLSGVTVKRGFL 199
                      V + F+
Sbjct: 176 TVYDSLGRKHVVTQYFV 192



 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 20/148 (13%), Positives = 49/148 (33%), Gaps = 10/148 (6%)

Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-----EISQKGKVIATM 158
           G+  V  + + V   G        +            ++ EKG       + + + + T+
Sbjct: 248 GKLVVNVNYTGVMQVGGDSTTTTNNQNGYAAGTPGEPSIDEKGNVVVQYSNGQKRTVGTV 307

Query: 159 GLYSVDMSQGFVRRENSGI-SPNIPPTP----LEDLSGVTVKRGFLEDSNANSMYEMGQM 213
            L +   + G     ++   +      P            +    LE SNA+   E+  M
Sbjct: 308 ALAAFASADGLTAVGDTAWKASTASGNPLYGTPGSGMFSKLATASLEMSNADVTRELVDM 367

Query: 214 IHLTQKFNSITTLIDENEKSMLEAIRNI 241
           +   + + + + +I    + M   ++ +
Sbjct: 368 MSAQRNYQANSKVIATENQMMQSLMQAL 395


>gi|91794995|ref|YP_564646.1| flagellar hook protein FlgE [Shewanella denitrificans OS217]
 gi|91716997|gb|ABE56923.1| flagellar basal body FlaE [Shewanella denitrificans OS217]
          Length = 402

 Score = 75.3 bits (183), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 6/132 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SFNI L+   +  Q L+T+++N++N+ TVGFR  + +F+ +      +  Q         
Sbjct: 2   SFNIALSGLQSTTQDLNTISNNIANSSTVGFRGGRSEFAAIY-----NGGQAGGVSVMST 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                + GS   TG +LD  ++GD +F L+ +    +  R G F     G +V   G   
Sbjct: 57  TQNFTKGGSLTYTGRQLDMGIQGDGFFVLKGTDGANMYARAGMFHQDSQGFVVDPVGNRL 116

Query: 123 VLDMASVPIQIP 134
               AS   +I 
Sbjct: 117 QGYGASATGRIQ 128



 Score = 68.4 bits (165), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 22/184 (11%), Positives = 52/184 (28%), Gaps = 12/184 (6%)

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPV 123
             ++ +    + TG  L+ A+         S                     +      +
Sbjct: 225 HKMTFDSNGVLQTGKTLNLAIADPTLLKGASAL------SFDIAYDKSTQYAANYNNSSL 278

Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVI-ATMGLYSVDMSQGFVRRENSGISPNIP 182
                   ++       N    G  +   +++   + L +     G     N+    +  
Sbjct: 279 RQDGFTSGELKGVRLDDNGLVYGTYTNGQELLQGQVALANFSNPNGLKPVSNNAWIASNE 338

Query: 183 PTPLEDLSGVTVKRG-----FLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                  +  T   G     +LE SN ++  EM  ++   + + S   ++D N       
Sbjct: 339 AGQAIMGAPSTGTMGTVTGGYLEGSNVDTTAEMVNLMSAQRNYQSNAKVLDVNSTMQQAL 398

Query: 238 IRNI 241
           + +I
Sbjct: 399 LNSI 402


>gi|301645413|ref|ZP_07245354.1| flagellar hook protein FlgE [Escherichia coli MS 146-1]
 gi|307136858|ref|ZP_07496214.1| flagellar basal body FlaE domain-containing protein [Escherichia
           coli H736]
 gi|331640713|ref|ZP_08341860.1| LfgE [Escherichia coli H736]
 gi|301076297|gb|EFK91103.1| flagellar hook protein FlgE [Escherichia coli MS 146-1]
 gi|315616827|gb|EFU97444.1| flgE [Escherichia coli 3431]
 gi|323181547|gb|EFZ66967.1| flgE [Escherichia coli 1357]
 gi|331040087|gb|EGI12295.1| LfgE [Escherichia coli H736]
          Length = 400

 Score = 75.3 bits (183), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 40/187 (21%), Positives = 69/187 (36%), Gaps = 6/187 (3%)

Query: 7   IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66
           I      A+ ++L  +++N++N  TVG++++  +FS +         Q +    +G    
Sbjct: 5   IAATGLNAVNEQLDGISNNIANAGTVGYKSMTTQFSAMYA-----GSQAMGVSVAGTAQS 59

Query: 67  SKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125
               GS +STG  LD A+  D +F   +S   I  TR G F+   +G +V+ASG Y    
Sbjct: 60  ISRGGSLVSTGNALDLAINDDGFFVTCDSAGNISYTRAGSFETDKNGYIVNASGAYLQGY 119

Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185
                  +          + G I  +     T             R      + N     
Sbjct: 120 PVDDTGTLQTGTVTDIQIKTGNIPAQASSSLTFTANFDASDDAIDRTTVPFDATNSSSYT 179

Query: 186 LEDLSGV 192
               + V
Sbjct: 180 DSYTTTV 186



 Score = 68.7 bits (166), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 55/194 (28%), Gaps = 10/194 (5%)

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113
           Q            +  +    +TG            F  ++   I LT D          
Sbjct: 211 QYTFDGQQQTGVPATTLTFDPNTGKLTSPTTPQTIEFQTDAAAPIDLTVDYSTCTQYGSD 270

Query: 114 L-VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172
             V+ +            +Q+    +++     GE   +G+V+    L +     G    
Sbjct: 271 FSVTTNAANGYASATQNGVQVDDDGKVYATYSNGERMLQGQVV----LATFPNENGLEAV 326

Query: 173 ENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
             +                      T+  G LE SN +   E+  ++   + + + T +I
Sbjct: 327 SGTAWVQTGESGTPLIGVPGSGTCGTLSSGVLESSNVDITSELVNLMTAQRNYQANTKVI 386

Query: 228 DENEKSMLEAIRNI 241
             + +      + +
Sbjct: 387 ATSTQLDDALFQAM 400


>gi|317180242|dbj|BAJ58028.1| flagellar hook protein FlgE [Helicobacter pylori F32]
          Length = 605

 Score = 75.3 bits (183), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 56/146 (38%), Gaps = 22/146 (15%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56
           M  +     +     +  + ++++N++N +T+G+R+   +F  +  +  + ++ K     
Sbjct: 1   MNDTLLNAYSGIKTHQFGIDSLSNNIANVNTLGYRSNDPEFKTLFSSHLDALNAKSVVAN 60

Query: 57  ---SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---------------RGI 98
                V      LS + G ++ +  E   A +G  WF +                  +  
Sbjct: 61  DRNYGVTGSGNVLSNKDGEYMPSEGEFHMAYQGKGWFVIGPNKNGEMTINKDGFSKKQDN 120

Query: 99  ILTRDGRFKVTDDGSLVSASGKYPVL 124
            LTR G F    DG LV+  G Y   
Sbjct: 121 FLTRAGNFARDADGYLVTPEGYYVYG 146



 Score = 65.7 bits (158), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 34/103 (33%), Gaps = 16/103 (15%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS----------------GVTVKR 196
           + +A +G+ +    QG  +   +           E+                     ++ 
Sbjct: 500 EPVARIGILAFTNDQGLRKIGGNLYEMQEGTINGENRPLSGNPILGWDEEGKLKFGKIRH 559

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +LE SN N+   +  +I + + ++         +  + EAI 
Sbjct: 560 KYLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAIS 602


>gi|237731007|ref|ZP_04561488.1| flagellar hook protein FlgE [Citrobacter sp. 30_2]
 gi|226906546|gb|EEH92464.1| flagellar hook protein FlgE [Citrobacter sp. 30_2]
          Length = 417

 Score = 75.3 bits (183), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 71/195 (36%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F + +S   +  +R+G+FK+ ++ ++V+  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRMVDSNGSVFYSRNGQFKLDENRNIVNMQGLQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q+                K   T  +     S   V  +      +  
Sbjct: 117 TGYPATGTPPTVQQGANPAPITIPNTLMAAKSTTTASMQVNLNSTDKVPTKTPFNPSDAD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 177 SYNKKGSVTVFDSQG 191



 Score = 74.9 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 13/122 (10%), Positives = 40/122 (32%), Gaps = 5/122 (4%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             +       +  +            +++ +V+  + L +   ++G   + ++  +    
Sbjct: 294 NQNGYKPGDLVSYQINNDGTVVGNYSNEQQQVLGQIVLANFANNEGLASQGDNVWAATQS 353

Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                     + +   +  G LE SN +   E+  MI   + + S    I   ++ +   
Sbjct: 354 SGVALLGTAGEGNFGKLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 413

Query: 238 IR 239
           + 
Sbjct: 414 VN 415


>gi|208434813|ref|YP_002266479.1| flagellar hook protein [Helicobacter pylori G27]
 gi|208432742|gb|ACI27613.1| flagellar hook protein [Helicobacter pylori G27]
          Length = 605

 Score = 75.3 bits (183), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 56/146 (38%), Gaps = 22/146 (15%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56
           M  +     +     +  + ++++N++N +T+G+R+   +F  +  +  + ++ K     
Sbjct: 1   MNDTLLNAYSGIKTHQFGIDSLSNNIANVNTLGYRSNDPEFKTLFSSHLDALNAKSVVTN 60

Query: 57  ---SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---------------RGI 98
                V      LS + G ++ +  E   A +G  WF +                  +  
Sbjct: 61  DRNYGVTGSGNVLSNKDGEYMPSEGEFHMAYQGKGWFVIGPNKNGEMTINKDGFSKKQDN 120

Query: 99  ILTRDGRFKVTDDGSLVSASGKYPVL 124
            LTR G F    DG LV+  G Y   
Sbjct: 121 FLTRAGNFARDADGYLVTPEGYYVYG 146



 Score = 65.7 bits (158), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 34/103 (33%), Gaps = 16/103 (15%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS----------------GVTVKR 196
           + +A +G+ +    QG  +   +           E+                     ++ 
Sbjct: 500 EPVARIGILAFTNDQGLRKIGGNLYEMQEGTINGENRPLSGNPILGWDEEGKLKFGKIRH 559

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +LE SN N+   +  +I + + ++         +  + EAI 
Sbjct: 560 KYLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAIS 602


>gi|193069470|ref|ZP_03050424.1| flagellar hook protein FlgE [Escherichia coli E110019]
 gi|192957218|gb|EDV87667.1| flagellar hook protein FlgE [Escherichia coli E110019]
 gi|323174795|gb|EFZ60410.1| flagellar hook protein flgE [Escherichia coli LT-68]
          Length = 401

 Score = 75.3 bits (183), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 71/195 (36%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF+T    F+++         +    V    
Sbjct: 2   AFSQAVSGLNAAATNLDVIGNNIANSATYGFKTGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ +LV+  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q+                K   T  +     S   +       + N  
Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNAD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 177 SYNKKGSVTVFDSQG 191



 Score = 72.6 bits (176), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             +       +  +            +++ +++  + L +   ++G     ++  S    
Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 337

Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                       +  T+  G LE SN +   E+  MI   + + S    I   ++ +   
Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397

Query: 238 IR 239
           + 
Sbjct: 398 VN 399


>gi|307637597|gb|ADN80047.1| Flagellar hook protein [Helicobacter pylori 908]
 gi|325996190|gb|ADZ51595.1| Flagellar hook protein [Helicobacter pylori 2018]
 gi|325997786|gb|ADZ49994.1| Flagellar hook protein [Helicobacter pylori 2017]
          Length = 605

 Score = 75.3 bits (183), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 56/146 (38%), Gaps = 22/146 (15%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56
           M  +     +     +  + ++++N++N +T+G+R+   +F  +  +  + ++ K     
Sbjct: 1   MNDTLLNAYSGIKTHQFGIDSLSNNIANVNTLGYRSNDPEFKTLFSSHLDALNAKSVVAN 60

Query: 57  ---SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---------------RGI 98
                V      LS + G ++ +  E   A +G  WF +                  +  
Sbjct: 61  DRNYGVTGSGNVLSNKDGEYMPSEGEFHMAYQGKGWFVIGPNKNGEMTINKDGFSKKQDN 120

Query: 99  ILTRDGRFKVTDDGSLVSASGKYPVL 124
            LTR G F    DG LV+  G Y   
Sbjct: 121 FLTRAGNFARDADGYLVTPEGYYVYG 146



 Score = 65.7 bits (158), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 34/103 (33%), Gaps = 16/103 (15%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS----------------GVTVKR 196
           + +A +G+ +    QG  +   +           E+                     ++ 
Sbjct: 500 EPVARIGILAFTNDQGLRKIGGNLYEMQEGTINGENRPLSGNPILGWDEEGKLKFGKIRH 559

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +LE SN N+   +  +I + + ++         +  + EAI 
Sbjct: 560 KYLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAIS 602


>gi|260853466|ref|YP_003227357.1| putative lateral flagellar hook protein [Escherichia coli O26:H11
           str. 11368]
 gi|260866413|ref|YP_003232815.1| putative lateral flagellar hook protein [Escherichia coli O111:H-
           str. 11128]
 gi|257752115|dbj|BAI23617.1| predicted lateral flagellar hook protein [Escherichia coli O26:H11
           str. 11368]
 gi|257762769|dbj|BAI34264.1| predicted lateral flagellar hook protein [Escherichia coli O111:H-
           str. 11128]
 gi|323158103|gb|EFZ44202.1| hypothetical protein ECEPECA14_0101 [Escherichia coli EPECa14]
 gi|323178494|gb|EFZ64072.1| hypothetical protein ECOK1180_3007 [Escherichia coli 1180]
          Length = 400

 Score = 75.3 bits (183), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 40/187 (21%), Positives = 71/187 (37%), Gaps = 6/187 (3%)

Query: 7   IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66
           I      A+ ++L  +++N++N  TVG++++  +FS +         Q +    +G    
Sbjct: 5   IAATGLNAVNEQLDGISNNIANAGTVGYKSMTTQFSAMYA-----GSQAMGVSVAGTAQS 59

Query: 67  SKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125
               GS +STG  LD A+  D +F + +S   I  TR G F+   +G +V+ASG Y    
Sbjct: 60  ISRGGSLVSTGNALDLAINDDGFFVMCDSAGNISYTRAGSFETDKNGYIVNASGAYLQGY 119

Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185
                  +          + G I  +     T         +   R      + N     
Sbjct: 120 PVDDTGTLQTGTVTDIQIKTGNIPAQASSSLTFTANFNASDEAIDRTTVPFDATNSSSYT 179

Query: 186 LEDLSGV 192
               + V
Sbjct: 180 DSYTTTV 186



 Score = 67.6 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/194 (12%), Positives = 55/194 (28%), Gaps = 10/194 (5%)

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113
           Q            +  +    +TG            F  ++   + LT D          
Sbjct: 211 QYTFDGQQQTGVPATTLTFDPNTGKLTSPTTPQTIEFQTDAAAPVDLTVDYSTCTQYGSE 270

Query: 114 L-VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172
             V+ +            +Q+    +++     GE   +G+V+    L +     G    
Sbjct: 271 FSVTTNAANGYASATQNGVQVDDDGKVYATYSNGERMLQGQVV----LATFPNENGLEAV 326

Query: 173 ENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
             +                      T+  G LE SN +   E+  ++   + + + T +I
Sbjct: 327 SGTAWVQTGESGTPLIGVPGSGTCGTLSSGVLESSNVDITSELVNLMTAQRNYQANTKVI 386

Query: 228 DENEKSMLEAIRNI 241
             + +      + +
Sbjct: 387 ATSTQLDDALFQAM 400


>gi|238752866|ref|ZP_04614331.1| Lateral flagellar hook protein (FlgE-like) [Yersinia rohdei ATCC
           43380]
 gi|238708905|gb|EEQ01158.1| Lateral flagellar hook protein (FlgE-like) [Yersinia rohdei ATCC
           43380]
          Length = 411

 Score = 75.3 bits (183), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 6/132 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SF+I      A+ ++LST+++N++N+ T GF+  + +F+ +         Q +    SG 
Sbjct: 2   SFSIANTGLSAVTEQLSTISNNIANSATKGFKASRTEFASMYAQ-----SQPLGVAVSGV 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASGKYP 122
                + GS   TG  +D A+ G+ +F +++       TR G F     G LV+ SG   
Sbjct: 57  SQSINKDGSIDRTGNAMDLAIAGNGFFVVKNSNGDEAYTRAGMFTSDKSGMLVNGSGMKL 116

Query: 123 VLDMASVPIQIP 134
                     I 
Sbjct: 117 QGYPVDAAGNIQ 128



 Score = 73.7 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 22/166 (13%), Positives = 53/166 (31%), Gaps = 10/166 (6%)

Query: 81  DFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF 140
           + A+ G       +P  I +   G  +   +    +           +    I     ++
Sbjct: 251 NMAISGGYGSPGAAPYSIDVDYAGTTQFDSNFLPTTNKSDGYTSGSKNGER-IENDGSVY 309

Query: 141 NVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VK 195
                GE   +G+++    L +     G   +  +  S              +     ++
Sbjct: 310 ATFSNGERMLQGRLV----LANFANPNGLAAQNGTTWSATSKSGAALLGEAGSGMLGSIE 365

Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
            G LE SN +   E+  ++   + + + T +I  N+  M    + +
Sbjct: 366 AGALEASNVDLTAELVGLMTAQRNYQANTKIISTNDSMMNALFQVL 411


>gi|331662482|ref|ZP_08363405.1| flagellar hook protein FlgE [Escherichia coli TA143]
 gi|284920899|emb|CBG33962.1| flagellar hook protein FlgE [Escherichia coli 042]
 gi|331060904|gb|EGI32868.1| flagellar hook protein FlgE [Escherichia coli TA143]
          Length = 402

 Score = 75.3 bits (183), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 71/195 (36%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ +LV+  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q+                K   T  +     S   +       + N  
Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKATTTASMQINLNSSDPLPTVTPFSASNAD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 177 SYNKKGSVTVFDSQG 191



 Score = 72.6 bits (176), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 21/173 (12%), Positives = 55/173 (31%), Gaps = 6/173 (3%)

Query: 72  SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPI 131
            F + GT +D A+  +      +      T    F  +   +  + +      +      
Sbjct: 229 EFNANGTLVDGAMANNIATGAINGADPA-TFSLSFLNSMQQNTGANNIVATTQNGYKPGD 287

Query: 132 QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PL 186
            +  +            +++ +++  + L +   ++G     ++  S             
Sbjct: 288 LVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTA 347

Query: 187 EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              +  T+  G LE SN +   E+  MI   + + S    I   ++ +   + 
Sbjct: 348 GTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400


>gi|323165588|gb|EFZ51375.1| flagellar basal-body rod protein flgG [Shigella sonnei 53G]
          Length = 125

 Score = 75.3 bits (183), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 10/96 (10%), Positives = 32/96 (33%), Gaps = 5/96 (5%)

Query: 149 SQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSN 203
                 +  + L +     G      +  +         + +        + +G++E SN
Sbjct: 29  QAAPVQVGQLNLTTFMNDTGLESIGENLYTETQSSGVPNESTPGLNGAGLLYQGYVETSN 88

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            N   E+  MI + + +   +  +   ++ + +  +
Sbjct: 89  VNVAEELVNMIQVQRAYEINSKAVSTTDQMLQKLTQ 124


>gi|320173529|gb|EFW48725.1| Flagellar hook protein FlgE [Shigella dysenteriae CDC 74-1112]
          Length = 402

 Score = 75.3 bits (183), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 71/195 (36%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ +LV+  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q+                K   T  +     S   +       + N  
Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNAD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 177 SYNKKGSVTVFDSQG 191



 Score = 71.8 bits (174), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             +       +  +            +++ +++  + L +   ++G     ++  S    
Sbjct: 279 PQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 338

Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                       +  T+  G LE SN +   E+  MI   + + S    I   ++ +   
Sbjct: 339 SGVALLGTAGTGNFATLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 398

Query: 238 IR 239
           + 
Sbjct: 399 VN 400


>gi|109947808|ref|YP_665036.1| flagellar hook protein FlgE [Helicobacter acinonychis str. Sheeba]
 gi|109715029|emb|CAK00037.1| flagellar hook protein [Helicobacter acinonychis str. Sheeba]
          Length = 605

 Score = 75.3 bits (183), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 56/146 (38%), Gaps = 22/146 (15%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56
           M  +     +     +  + ++++N++N +T+G+R+   +F  +  +  + ++ K     
Sbjct: 1   MNDTLLNAYSGIKTHQFGIDSLSNNIANVNTLGYRSNDPEFKTLFSSHLDALNAKSVVAN 60

Query: 57  ---SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---------------RGI 98
                V      LS + G ++ +  E   A +G  WF +                  +  
Sbjct: 61  DRNYGVTGSGNVLSNKDGEYMPSEGEFHMAYQGKGWFVIGPNKNGEMTINKDGFSKKQDN 120

Query: 99  ILTRDGRFKVTDDGSLVSASGKYPVL 124
            LTR G F    DG LV+  G Y   
Sbjct: 121 FLTRAGNFARDADGYLVTPEGYYVYG 146



 Score = 66.8 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 34/103 (33%), Gaps = 16/103 (15%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS----------------GVTVKR 196
           + +A +G+ +    QG  +   +           E+                     ++ 
Sbjct: 500 EPVARIGILAFTNDQGLRKIGGNLYEMQEGTINGENRPLSGNPILGWDEEGKLKFGKIRH 559

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +LE SN N+   +  +I + + ++         +  + EAI 
Sbjct: 560 KYLETSNVNAGNALTNLILMQRGYSMNAKAFGAGDDMIKEAIS 602


>gi|327398495|ref|YP_004339364.1| flagellar hook-basal body protein [Hippea maritima DSM 10411]
 gi|327181124|gb|AEA33305.1| flagellar hook-basal body protein [Hippea maritima DSM 10411]
          Length = 719

 Score = 75.3 bits (183), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 18/123 (14%), Positives = 35/123 (28%), Gaps = 5/123 (4%)

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
              D                V      + K   +A + +     ++G ++   S  S   
Sbjct: 594 QTQDGYPGGSLQRIMINQDGVVVGIFSNGKSYPLAQIAMAKFANNEGLMKEGGSMYSETA 653

Query: 182 PPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                           T     LE SN +   E   MI   + F + +  I  +++ + E
Sbjct: 654 NSGAPLIGTAGTGGRGTFAPSHLEMSNVDLAEEFTNMIIYERAFQANSRSITTSDQMIQE 713

Query: 237 AIR 239
            + 
Sbjct: 714 LLN 716



 Score = 65.3 bits (157), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 65/182 (35%), Gaps = 14/182 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50
           M  S   G++   + +Q +  V +N++N +T+GF+  ++ F +V+    +          
Sbjct: 1   MLRSLWSGVSGLKSEQQGMDVVGNNVANVNTIGFKKGRINFVDVLSQTMSAATGPEGNIG 60

Query: 51  --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF--ALESPRGIILTRDGRF 106
             +  Q                GS  +T    D A++GD +F  + +  +    TR G F
Sbjct: 61  GKNAAQIGLGTTVAVVDNIFSQGSLQATSKITDLAIQGDGFFVVSDDGGKTYRYTRAGDF 120

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
               DG+LV+  G      +A+                  +       I        +++
Sbjct: 121 SFDADGNLVNPEGFIVQGWLANEETHKINTAASIENIVVPQDKTVPAGITKNISIKANLN 180

Query: 167 QG 168
            G
Sbjct: 181 GG 182


>gi|317014317|gb|ADU81753.1| flagellar hook protein FlgE [Helicobacter pylori Gambia94/24]
          Length = 605

 Score = 75.3 bits (183), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 56/146 (38%), Gaps = 22/146 (15%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56
           M  +     +     +  + ++++N++N +T+G+R+   +F  +  +  + ++ K     
Sbjct: 1   MNDTLLNAYSGIKTHQFGIDSLSNNIANVNTLGYRSNDPEFKTLFSSHLDALNAKSVVAN 60

Query: 57  ---SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---------------RGI 98
                V      LS + G ++ +  E   A +G  WF +                  +  
Sbjct: 61  DRNYGVTGSGNVLSNKDGEYMPSEGEFHMAYQGKGWFVIGPNKNGEMTINKDGFSKKQDN 120

Query: 99  ILTRDGRFKVTDDGSLVSASGKYPVL 124
            LTR G F    DG LV+  G Y   
Sbjct: 121 FLTRAGNFARDADGYLVTPEGYYVYG 146



 Score = 65.7 bits (158), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 34/103 (33%), Gaps = 16/103 (15%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS----------------GVTVKR 196
           + +A +G+ +    QG  +   +           E+                     ++ 
Sbjct: 500 EPVARIGILAFTNDQGLRKIGGNLYEMQEGTINGENRPLSGNPILGWDEEGKLKFGKIRH 559

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +LE SN N+   +  +I + + ++         +  + EAI 
Sbjct: 560 KYLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAIS 602


>gi|291617020|ref|YP_003519762.1| FlgE [Pantoea ananatis LMG 20103]
 gi|291152050|gb|ADD76634.1| FlgE [Pantoea ananatis LMG 20103]
          Length = 415

 Score = 75.3 bits (183), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 13/125 (10%), Positives = 38/125 (30%), Gaps = 5/125 (4%)

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                +  +                    +Q+ +++  + L S    +G   + ++  + 
Sbjct: 289 GNATQNGYAPGDLTSYAINNDGTITGSYSNQRTQLLGQIVLASFSNPEGLKSQGDNVWAE 348

Query: 180 NIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
                          +  ++  G LE SN +   E+  MI   + + +    I   ++ +
Sbjct: 349 TNASGQAAVGLANTGTFGSLTAGALESSNVDMSKELVNMIVAQRNYQANAQTIKTQDQIL 408

Query: 235 LEAIR 239
              + 
Sbjct: 409 NTLVN 413



 Score = 71.8 bits (174), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 64/164 (39%), Gaps = 6/164 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SF+  ++   A    L  + +N++N+ T GF++  + F+++       +  K++ V    
Sbjct: 2   SFSQAVSGLGAASSNLDVIGNNIANSATAGFKSSTIAFADMFAGSNVGLGTKVAAV---- 57

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
              +   GS  +T   LD AL G+ +F    S   +  +R+G+F +  + +LV+  G   
Sbjct: 58  -IQNFNDGSTTTTSRGLDVALSGNGFFRLTNSAGAVSYSRNGQFTLDQNRNLVNTQGLNV 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
               AS      Q        +            T    +   S
Sbjct: 117 TGYPASGVPPTIQSGANPVAIKIPTTQMPANATTTANQVAKLNS 160


>gi|90577344|ref|ZP_01233155.1| flagellar hook protein [Vibrio angustum S14]
 gi|90440430|gb|EAS65610.1| flagellar hook protein [Vibrio angustum S14]
          Length = 408

 Score = 75.3 bits (183), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 33/132 (25%), Positives = 56/132 (42%), Gaps = 6/132 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SF+I L+   A   +L+T+++N++N  T GF+  + +FS V      +  Q      +  
Sbjct: 2   SFDIALSGLDATNVQLNTISNNIANVSTSGFKESRTEFSAVY-----NGMQAGGVEVAAI 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                + GS   TG  LD A+ G  +F   +     + TR G F    D ++VS +G   
Sbjct: 57  SQNFDKTGSITGTGRPLDLAISGSGFFVTKDHTGQTLYTRSGVFNSDKDNNIVSNNGAKL 116

Query: 123 VLDMASVPIQIP 134
                     + 
Sbjct: 117 QGYTVDANNNLQ 128



 Score = 73.7 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 13/100 (13%), Positives = 34/100 (34%), Gaps = 5/100 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLED 201
             + + ++   + L      QG V+   +    +       + +  T     +  G LE 
Sbjct: 309 YTNGQSQLQGQVMLADFANPQGLVKTNGTSWIQSFSSGAPVNGAPSTGTLGGLVAGALEG 368

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           SN +   E+  ++   + + +    I  ++K        +
Sbjct: 369 SNVDLTSELVSLMTAQRNYQANAKTISTSDKLTQSLFNAV 408


>gi|15611911|ref|NP_223562.1| flagellar hook protein FlgE [Helicobacter pylori J99]
 gi|4155414|gb|AAD06422.1| putative FLAGELLAR BASAL-BODY/ROD/HOOKPROTEIN [Helicobacter pylori
           J99]
          Length = 605

 Score = 75.3 bits (183), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 56/146 (38%), Gaps = 22/146 (15%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56
           M  +     +     +  + ++++N++N +T+G+R+   +F  +  +  + ++ K     
Sbjct: 1   MNDTLLNAYSGIKTHQFGIDSLSNNIANVNTLGYRSNDPEFKTLFSSHLDALNAKSVVAN 60

Query: 57  ---SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---------------RGI 98
                V      LS + G ++ +  E   A +G  WF +                  +  
Sbjct: 61  DRNYGVTGSGNVLSNKDGEYMPSEGEFHMAYQGKGWFVIGPNKNGEMTINKDGFSKKQDN 120

Query: 99  ILTRDGRFKVTDDGSLVSASGKYPVL 124
            LTR G F    DG LV+  G Y   
Sbjct: 121 FLTRAGNFARDADGYLVTPEGYYVYG 146



 Score = 65.7 bits (158), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 34/103 (33%), Gaps = 16/103 (15%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS----------------GVTVKR 196
           + +A +G+ +    QG  +   +           E+                     ++ 
Sbjct: 500 EPVARIGILAFTNDQGLRKIGGNLYEMQEGTINGENRPLSGNPILGWDEEGKLKFGKIRH 559

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +LE SN N+   +  +I + + ++         +  + EAI 
Sbjct: 560 KYLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAIS 602


>gi|327393471|dbj|BAK10893.1| flagellar hook protein FlgE [Pantoea ananatis AJ13355]
          Length = 415

 Score = 75.3 bits (183), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 13/125 (10%), Positives = 38/125 (30%), Gaps = 5/125 (4%)

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                +  +                    +Q+ +++  + L S    +G   + ++  + 
Sbjct: 289 GNATQNGYAPGDLTSYAINNDGTITGSYSNQRTQLLGQIVLASFSNPEGLKSQGDNVWAE 348

Query: 180 NIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
                          +  ++  G LE SN +   E+  MI   + + +    I   ++ +
Sbjct: 349 TNASGQAAVGLANTGTFGSLTAGALESSNVDMSKELVNMIVAQRNYQANAQTIKTQDQIL 408

Query: 235 LEAIR 239
              + 
Sbjct: 409 NTLVN 413



 Score = 71.8 bits (174), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 64/164 (39%), Gaps = 6/164 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SF+  ++   A    L  + +N++N+ T GF++  + F+++       +  K++ V    
Sbjct: 2   SFSQAVSGLGAASSNLDVIGNNIANSATAGFKSSTIAFADMFAGSNVGLGTKVAAV---- 57

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
              +   GS  +T   LD AL G+ +F    S   +  +R+G+F +  + +LV+  G   
Sbjct: 58  -IQNFNDGSTTTTSRGLDVALSGNGFFRLTNSAGAVSYSRNGQFTLDQNRNLVNTQGLNV 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
               AS      Q        +            T    +   S
Sbjct: 117 TGYPASGVPPTIQTGANPVAIKIPTTQMPANATTTANQVAKLNS 160


>gi|300817270|ref|ZP_07097488.1| flagellar hook protein FlgE [Escherichia coli MS 107-1]
 gi|307313519|ref|ZP_07593140.1| fagellar hook-basal body protein [Escherichia coli W]
 gi|300530246|gb|EFK51308.1| flagellar hook protein FlgE [Escherichia coli MS 107-1]
 gi|306906687|gb|EFN37198.1| fagellar hook-basal body protein [Escherichia coli W]
 gi|315059542|gb|ADT73869.1| flagellar hook protein [Escherichia coli W]
 gi|323171064|gb|EFZ56713.1| flgE [Escherichia coli LT-68]
 gi|323379899|gb|ADX52167.1| fagellar hook-basal body protein [Escherichia coli KO11]
          Length = 400

 Score = 75.3 bits (183), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 40/187 (21%), Positives = 69/187 (36%), Gaps = 6/187 (3%)

Query: 7   IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66
           I      A+ ++L  +++N++N  TVG++++  +FS +         Q +    +G    
Sbjct: 5   IAATGLNAVNEQLDGISNNIANAGTVGYKSMTTQFSAMYA-----GSQAMGVSVAGTAQS 59

Query: 67  SKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125
               GS +STG  LD A+  D +F   +S   I  TR G F+   +G +V+ASG Y    
Sbjct: 60  ISRGGSLVSTGNALDLAINNDGFFVTCDSAGNISYTRAGSFETDKNGYIVNASGAYLQGY 119

Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185
                  +          + G I  +     T             R      + N     
Sbjct: 120 PVDDTGTLQTGTVTDIQIKTGNIPAQASSSLTFTANFDASDDAIDRTTVPFDATNSSSYT 179

Query: 186 LEDLSGV 192
               + V
Sbjct: 180 DSYTTTV 186



 Score = 68.4 bits (165), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 55/194 (28%), Gaps = 10/194 (5%)

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113
           Q            +  +    +TG            F  ++   I LT D          
Sbjct: 211 QYTFDGQQQTGVPATTLTFDPNTGKLTSPTTPQTIEFQTDAAAPIDLTVDYSTCTQYGSE 270

Query: 114 L-VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172
             V+ +            +Q+    +++     GE   +G+V+    L +     G    
Sbjct: 271 FSVTTNAANGYASATQNGVQVDDDGKVYATYSNGERMLQGQVV----LATFPNENGLEAV 326

Query: 173 ENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
             +                      T+  G LE SN +   E+  ++   + + + T +I
Sbjct: 327 SGTAWVQTGESGTPLIGVPGSGTCGTLSSGVLESSNVDITSELVNLMTAQRNYQANTKVI 386

Query: 228 DENEKSMLEAIRNI 241
             + +      + +
Sbjct: 387 ATSTQLDDALFQAM 400


>gi|83595982|gb|ABC25342.1| flagellar hook protein [uncultured marine bacterium Ant24C4]
          Length = 437

 Score = 75.3 bits (183), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 41/165 (24%), Positives = 64/165 (38%), Gaps = 10/165 (6%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
           +S N G+A   A   RL+T++DN++N+ T G++     F  +V    N        V + 
Sbjct: 5   SSLNAGVAGLSANATRLATISDNIANSSTFGYKRAVTDFQSLVIENSNSKYTAG-GVRTT 63

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALESP---------RGIILTRDGRFKVTDDGS 113
              L  E GS +ST    D A+ G     + S            ++LT  G F+  +DG 
Sbjct: 64  TTRLIDERGSLVSTTNPTDLAVRGRGLLPVTSEASVQVANGDHPLLLTTTGSFRPDEDGY 123

Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158
           L S SG   +   A+    IP        G +       +     
Sbjct: 124 LRSPSGLVLMGWAANADGTIPTNPRDSVDGLEPIKINSNQFAGEP 168



 Score = 66.4 bits (160), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 15/98 (15%), Positives = 32/98 (32%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLED 201
             S   +V+  + L  V    G    +      +            D     V     E+
Sbjct: 337 FDSGINRVLYQVPLVDVSNVNGLESLDQQSYRVSPDSGTFFLWDAGDGPTGDVVSFAREE 396

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           S+ +   E+ Q+I   + ++S   +I   ++ + E   
Sbjct: 397 SSTDVAGELTQLIQTQRAYSSNAKVIQTVDEMLQETTN 434


>gi|149375034|ref|ZP_01892807.1| Flagellar hook protein FlgE [Marinobacter algicola DG893]
 gi|149360923|gb|EDM49374.1| Flagellar hook protein FlgE [Marinobacter algicola DG893]
          Length = 618

 Score = 75.3 bits (183), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 46/110 (41%), Gaps = 2/110 (1%)

Query: 17  QRLSTVADNMSNTDTVGFRTIKVKFSEVVGA--IKNDIDQKISFVASGKEYLSKEVGSFI 74
             L    +N++N  TVGF++ + +F ++  +  +    +     V       +   G+  
Sbjct: 1   MDLDVTGNNIANASTVGFKSSQAQFGDLYASGFLSAGTNPIGDGVRVQDVKQNFGQGNIS 60

Query: 75  STGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVL 124
            T   LD A+ GD +F L +   +  +R G+F +  DG + +        
Sbjct: 61  FTDNGLDLAINGDGFFVLNNGGEVRYSRAGQFGIDKDGFVTNNQNMRVQG 110



 Score = 69.5 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 11/98 (11%), Positives = 34/98 (34%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLED 201
             + + + +  + L S + + G      +                +  +  ++K   +E+
Sbjct: 519 YTNGQSQSLGQVALASFNNTNGLSPVGETTWVETFESGQPIIGAPDTGTLGSIKASSIEE 578

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E+  +I   + + +    I+ ++      I 
Sbjct: 579 SNVDLSAELVNLIIAQRNYQANAKTIETSDAVTQTVIN 616


>gi|327254554|gb|EGE66170.1| hypothetical protein ECSTEC7V_0308 [Escherichia coli STEC_7v]
          Length = 400

 Score = 75.3 bits (183), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 41/187 (21%), Positives = 73/187 (39%), Gaps = 13/187 (6%)

Query: 7   IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66
           I      A+ ++L  +++N++N  TVG++++  +FS +         Q +    +G    
Sbjct: 5   IAATGLNAVNEQLDGISNNIANAGTVGYKSMTTQFSAMYA-----GSQAMGVSVAGTAQS 59

Query: 67  SKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125
               GS +STG  LD A+  D +F + +S   I  TR G F+   DG +V+ASG Y    
Sbjct: 60  ISRGGSLVSTGNALDLAINDDGFFVMCDSAGNISYTRAGSFETDKDGYIVNASGAYLQGY 119

Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185
                  +          + G        I      S+  +      +++     +P  P
Sbjct: 120 PVDDSGTLQTGTVTDIQIKTGN-------IPAQASSSLTFTANLDASDDAIDRTTVPFDP 172

Query: 186 LEDLSGV 192
               S  
Sbjct: 173 TNSSSYT 179



 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 55/194 (28%), Gaps = 10/194 (5%)

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113
           Q            +  +    +TG            F  ++   I LT D          
Sbjct: 211 QYTFDGQQQTGVPATTLTFDPNTGKLTSPTTPQTIEFQTDAAAPIDLTVDYSTCTQYGSD 270

Query: 114 L-VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172
             V+ +            +Q+    +++     GE   +G+V+    L +     G    
Sbjct: 271 FSVTTNAADGYASATQNGVQVDDDGKVYATYSNGERMLQGQVV----LATFPNDDGLQAV 326

Query: 173 ENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
             +                      T+  G LE SN +   E+  ++   + + + T +I
Sbjct: 327 SGTAWVQTGESGTPLIGVPGSGTCGTLTSGALESSNVDITSELVNLMTAQRNYQANTKVI 386

Query: 228 DENEKSMLEAIRNI 241
             + +      + +
Sbjct: 387 ATSTQLDDALFQAM 400


>gi|295096225|emb|CBK85315.1| fagellar hook-basal body proteins [Enterobacter cloacae subsp.
           cloacae NCTC 9394]
          Length = 402

 Score = 75.3 bits (183), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 70/192 (36%), Gaps = 11/192 (5%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGSASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F + ++   +  +R+G+FK+ ++ +LV+  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRMVDANGSVFYSRNGQFKLDENRNLVNMQGLQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
                +          +        IS    ++A     +          + +      P
Sbjct: 117 TGYPVAGTPP-----TVQTGANPQAISIPTTLMAAKSTTTASQQINLNSTDTAPTVAFDP 171

Query: 183 PTPLEDLSGVTV 194
             P       TV
Sbjct: 172 SNPDSYNKKGTV 183



 Score = 74.9 bits (182), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 19/150 (12%), Positives = 47/150 (31%), Gaps = 5/150 (3%)

Query: 95  PRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV 154
           P     T D  F  +   +  + +      +       +  +            +++ +V
Sbjct: 251 PGATPATFDMSFANSMQQNTGANNIVATSQNGYKPGDLVSYQINDDGTVVGNYSNEQTQV 310

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLEDSNANSMYE 209
           +  + L +   ++G     ++  S                +  T+  G LE SN +   E
Sbjct: 311 LGQIVLANFANNEGLKSEGDNVWSATQSSGVALLGTAGSGNFGTLTNGALEASNVDLSKE 370

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +  MI   + + S    I   ++ +   + 
Sbjct: 371 LVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400


>gi|146305250|ref|YP_001185715.1| flagellar basal body FlaE domain-containing protein [Pseudomonas
           mendocina ymp]
 gi|145573451|gb|ABP82983.1| flagellar basal body FlaE domain protein [Pseudomonas mendocina
           ymp]
          Length = 395

 Score = 75.3 bits (183), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 32/131 (24%), Positives = 57/131 (43%), Gaps = 6/131 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SFNI +    A+ ++L+T++ N++N  T GF++ + +F  +         Q +       
Sbjct: 2   SFNIAMTGLSAVNEQLNTISHNIANAGTTGFKSSRTEFGSIYADS-----QAMGVEVLAT 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                + GS ++TG  LD A+ G  +F    S   +  TR G F    D  +V+A+G   
Sbjct: 57  TQSISQGGSLVTTGRSLDLAISGGGFFVTRGSNGDVSYTRAGVFGADKDNYIVNAAGLKL 116

Query: 123 VLDMASVPIQI 133
                     +
Sbjct: 117 QGYPVDAAGNL 127



 Score = 63.7 bits (153), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 14/149 (9%), Positives = 47/149 (31%), Gaps = 12/149 (8%)

Query: 92  LESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQK 151
                 I  +   ++       +V+++            + + +   ++     G+   +
Sbjct: 248 DPMNIAIDYSNSSQYGSD---FVVTSNRASGYAAGEQTGLSVEKDGMVYANYSNGQRMLQ 304

Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANS 206
           G+V     L +   + G      +    +                  +  G LE+SN + 
Sbjct: 305 GQV----ALATFANAGGLKNVSGTAWVESAESGAALIGVPGVGPFGELVAGSLENSNVDL 360

Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSML 235
             ++  ++   + + + T ++  N++   
Sbjct: 361 TQQLVGLMEGQRNYQANTKVLTTNKELTQ 389


>gi|297517866|ref|ZP_06936252.1| flagellar hook protein FlgE [Escherichia coli OP50]
          Length = 401

 Score = 75.3 bits (183), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 71/195 (36%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ +LV+  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q+                K   T  +     S   +       + N  
Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMATKTTTTASMQINLNSSDPLPTVTPFSASNAD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 177 SYNKKGSVTVFDSQG 191



 Score = 72.6 bits (176), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             +       +  +            +++ +++  + L +   ++G     ++  S    
Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 337

Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                       +  T+  G LE SN +   E+  MI   + + S    I   ++ +   
Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397

Query: 238 IR 239
           + 
Sbjct: 398 VN 399


>gi|192289142|ref|YP_001989747.1| flagellar hook protein FlgE [Rhodopseudomonas palustris TIE-1]
 gi|192282891|gb|ACE99271.1| flagellar basal body FlaE domain protein [Rhodopseudomonas
           palustris TIE-1]
          Length = 421

 Score = 74.9 bits (182), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 3/117 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           + +  ++A  A  Q LS ++DN++N+DT G++T    FS++V A  +        V    
Sbjct: 6   ALSSAISALNAQSQSLSMISDNIANSDTTGYKTTSAMFSQLVTASSSATSYASGGVTVAG 65

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWF---ALESPRGIILTRDGRFKVTDDGSLVSA 117
                + G   +T    D A++G  +F      S      TR+G F + + G LV++
Sbjct: 66  RANISQQGLLAATSNATDVAIQGSGFFVVSDQTSGGTTSYTRNGAFSIDNAGYLVNS 122



 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/101 (11%), Positives = 27/101 (26%), Gaps = 5/101 (4%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLED 201
             + +   I  + + +     G         S                    +    LE 
Sbjct: 321 YSNGQTIAIYKIAVATFKDPDGLSVNSYGIYSVTAASGDASVQTSGSNGAGKIYGSELES 380

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  ++  +   MI   Q +++ + +I    K     I  + 
Sbjct: 381 STTDTSSQFASMISAQQAYSAASQVITTVNKMFDTLISAMR 421


>gi|331666546|ref|ZP_08367420.1| LfgE [Escherichia coli TA271]
 gi|331065770|gb|EGI37654.1| LfgE [Escherichia coli TA271]
          Length = 400

 Score = 74.9 bits (182), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 40/187 (21%), Positives = 70/187 (37%), Gaps = 6/187 (3%)

Query: 7   IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66
           I      A+ ++L  +++N++N  TVG++++  +FS +         Q +    +G    
Sbjct: 5   IAATGLNAVNEQLDGISNNIANAGTVGYKSMTTQFSAMYA-----GSQAMGVSVAGTAQS 59

Query: 67  SKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125
               GS +STG  LD A+  D +F   +S   I  TR G F+   +G +V+ASG Y    
Sbjct: 60  ISRGGSLVSTGNALDLAINDDGFFVTCDSAGNISYTRAGSFETDKNGYIVNASGAYLQGY 119

Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185
                  +          + G I  +     T         +   R      + N     
Sbjct: 120 PVDDTGTLQTGTVTDIQIKTGNIPAQASSSLTFTANFNASDEAIDRTTVPFDATNSSSYT 179

Query: 186 LEDLSGV 192
               + V
Sbjct: 180 DSYTTTV 186



 Score = 68.4 bits (165), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 55/194 (28%), Gaps = 10/194 (5%)

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113
           Q            +  +    +TG            F  ++   I LT D          
Sbjct: 211 QYTFDGQQQTGVPATTLTFDPNTGKLTSPTTPQTIEFQTDAAAPIDLTVDYSTCTQYGSE 270

Query: 114 L-VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172
             V+ +            +Q+    +++     GE   +G+V+    L +     G    
Sbjct: 271 FSVTTNAANGYASATQNGVQVDDDGKVYATYSNGERMLQGQVV----LATFPNENGLEAV 326

Query: 173 ENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
             +                      T+  G LE SN +   E+  ++   + + + T +I
Sbjct: 327 SGTAWVQTGESGTPLIGVPGSGTCGTLSSGVLESSNVDITSELVNLMTAQRNYQANTKVI 386

Query: 228 DENEKSMLEAIRNI 241
             + +      + +
Sbjct: 387 ATSTQLDDALFQAM 400


>gi|331645418|ref|ZP_08346522.1| LfgE [Escherichia coli M605]
 gi|331045580|gb|EGI17706.1| LfgE [Escherichia coli M605]
          Length = 400

 Score = 74.9 bits (182), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 40/187 (21%), Positives = 69/187 (36%), Gaps = 6/187 (3%)

Query: 7   IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66
           I      A+ ++L  +++N++N  TVG++++  +FS +         Q +    +G    
Sbjct: 5   IAATGLNAVNEQLDGISNNIANAGTVGYKSMTTQFSAMYA-----GSQAMGVSVAGTAQS 59

Query: 67  SKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125
               GS +STG  LD A+  D +F   +S   I  TR G F+   +G +V+ASG Y    
Sbjct: 60  ISRGGSLVSTGNALDLAINDDGFFVTCDSAGNISYTRAGSFETDKNGYIVNASGAYLQGY 119

Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185
                  +          + G I  +     T             R      + N     
Sbjct: 120 PVDDTGTLQTGTVTDIQIKTGNIPAQASSSLTFTANFDASDAAIDRTTVPFDATNSSSYT 179

Query: 186 LEDLSGV 192
               + V
Sbjct: 180 DSYTTTV 186



 Score = 68.7 bits (166), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 55/194 (28%), Gaps = 10/194 (5%)

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113
           Q            +  +    +TG            F  ++   I LT D          
Sbjct: 211 QYTFDGQQQTGVPATTLTFDPNTGKLTSPTTPQTIEFQTDAAAPIDLTVDYSTCTQYGSE 270

Query: 114 L-VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172
             V+ +            +Q+    +++     GE   +G+V+    L +     G    
Sbjct: 271 FSVTTNAADGYASATQNGVQVDDDGKVYATYSNGERMLQGQVV----LATFPNENGLEAV 326

Query: 173 ENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
             +                      T+  G LE SN +   E+  ++   + + + T +I
Sbjct: 327 SGTAWVQTGESGTPLIGVPGSGTCGTLSSGVLESSNVDITSELVNLMTAQRNYQANTKVI 386

Query: 228 DENEKSMLEAIRNI 241
             + +      + +
Sbjct: 387 ATSTQLDDALFQAM 400


>gi|218549196|ref|YP_002382987.1| flagellar hook protein FlgE [Escherichia fergusonii ATCC 35469]
 gi|218356737|emb|CAQ89365.1| flagellar hook protein [Escherichia fergusonii ATCC 35469]
          Length = 401

 Score = 74.9 bits (182), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 72/195 (36%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ +LV+  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDIAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q+                K   T  +     S   +    +  + N  
Sbjct: 117 TGYPAAGTPPTIQQGANPTNISIPNTLMAAKTTTTAAMQINLNSSDPLPTVKAFDASNAD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 177 SYNKKGSVTVFDSQG 191



 Score = 72.6 bits (176), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             +       +  +            +++ +++  + L +   ++G     ++  S    
Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQA 337

Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                       +  T+  G LE SN +   E+  MI   + + S    I   ++ +   
Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397

Query: 238 IR 239
           + 
Sbjct: 398 VN 399


>gi|115522802|ref|YP_779713.1| flagellar hook protein FlgE [Rhodopseudomonas palustris BisA53]
 gi|115516749|gb|ABJ04733.1| flagellar basal body FlaE domain protein [Rhodopseudomonas
           palustris BisA53]
          Length = 421

 Score = 74.9 bits (182), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 59/133 (44%), Gaps = 3/133 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           + +  ++A  +  Q L+ ++DN++N+ TVG++T    F  +V +  +        V    
Sbjct: 6   ALSSAISALNSQSQSLAMISDNIANSQTVGYKTTSALFDSLVTSSSSASSYSSGGVTVLS 65

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALE---SPRGIILTRDGRFKVTDDGSLVSASGK 120
           +      G   +T +  D  + G+ +F +    +    + TR G F + D G +V+ASG 
Sbjct: 66  KSNISSQGLLTTTTSSTDIGISGNGFFPVSTALNGGSTLYTRAGSFTIDDSGYMVNASGA 125

Query: 121 YPVLDMASVPIQI 133
           Y +         +
Sbjct: 126 YLLGWRTDADGNV 138



 Score = 55.6 bits (132), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 13/86 (15%), Positives = 27/86 (31%), Gaps = 5/86 (5%)

Query: 162 SVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
           +         + N   +                   T++ G LE S A++  E   MI  
Sbjct: 336 TFAAPDQLQVKSNGLYAATADSGTAIVQQSGSNGAGTIQGGKLEASTADTNTEFSNMISA 395

Query: 217 TQKFNSITTLIDENEKSMLEAIRNIA 242
            Q +++ + +I    +     I  + 
Sbjct: 396 QQAYSAASQVITAVNEMFDTLISAVR 421


>gi|281306984|pdb|3A69|A Chain A, Atomic Model Of The Bacterial Flagellar Hook Based On
           Docking An X-Ray Derived Structure And Terminal Two
           Alpha- Helices Into An 7.1 Angstrom Resolution Cryoem
           Map
          Length = 402

 Score = 74.9 bits (182), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 71/195 (36%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SF+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 1   SFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 55

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ +LV+  G   
Sbjct: 56  ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGMQL 115

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q+                K   T  +     S   V  +      +  
Sbjct: 116 TGYPATGTPPTIQQGANPAPITIPNTLMAAKSTTTASMQINLNSTDPVPSKTPFSVSDAD 175

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 176 SYNKKGTVTVYDSQG 190



 Score = 74.1 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 15/147 (10%), Positives = 45/147 (30%), Gaps = 5/147 (3%)

Query: 98  IILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157
              T    F  +   +  + +      +       +  +            +++ +V+  
Sbjct: 254 TAATFSLSFLNSMQQNTGANNIVATNQNGYKPGDLVSYQINNDGTVVGNYSNEQEQVLGQ 313

Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQ 212
           + L +   ++G   + ++  +                +   +  G LE SN +   E+  
Sbjct: 314 IVLANFANNEGLASQGDNVWAATQASGVALLGTAGSGNFGKLTNGALEASNVDLSKELVN 373

Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIR 239
           MI   + + S    I   ++ +   + 
Sbjct: 374 MIVAQRNYQSNAQTIKTQDQILNTLVN 400


>gi|330447903|ref|ZP_08311551.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328492094|dbj|GAA06048.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 398

 Score = 74.9 bits (182), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 33/132 (25%), Positives = 56/132 (42%), Gaps = 6/132 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SF+I L+   A   +L+T+++N++N  T GF+  + +FS V      +  Q      +  
Sbjct: 2   SFDIALSGLDATNVQLNTISNNIANVSTSGFKESRTEFSAVY-----NGMQAGGVEVAAI 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                + GS   TG  LD A+ G  +F   +     + TR G F    D ++VS +G   
Sbjct: 57  SQNFDKTGSITGTGRPLDLAISGSGFFVTKDHTGQTLYTRSGVFGSDKDNNIVSNNGAKL 116

Query: 123 VLDMASVPIQIP 134
                     + 
Sbjct: 117 QGYTVDANNNLQ 128



 Score = 74.1 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 13/100 (13%), Positives = 34/100 (34%), Gaps = 5/100 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLED 201
             + + ++   + L      QG V+   +    +       + +  T     +  G LE 
Sbjct: 299 YTNGQSQLQGQVMLADFANPQGLVKTNGTSWIQSFSSGAPVNGAPSTGTLGGLVAGALEG 358

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           SN +   E+  ++   + + +    I  ++K        +
Sbjct: 359 SNVDLTSELVSLMTAQRNYQANAKTISTSDKLTQSLFNAV 398


>gi|4378858|gb|AAD19726.1| flagellar hook protein [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 412

 Score = 74.9 bits (182), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 73/197 (37%), Gaps = 6/197 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK-ISFVASG 62
           +F   L    A +  LS  ++N++N+ + GF+     F E+V        Q         
Sbjct: 2   AFYTSLTGLNAAQTDLSVPSNNIANSGSYGFKKTTTDFGELVADSPLASGQNIGQGTRLR 61

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALESPRG----IILTRDGRFKVTDDGSLVSAS 118
                   GS  +T   LD  + GD +F ++SPR     I LTRDG F    + ++V++ 
Sbjct: 62  ATIQDFTSGSMKTTNRALDMMVNGDGFFLVKSPRPPSGTISLTRDGSFLTDKNNNVVTSD 121

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178
           G Y  +   +    I    E       G + +   + +     S+  + G   +  + ++
Sbjct: 122 GHYLQVYATTNSGNIYNNGETG-SATGGRVVKNLTLPSYEDQVSISSATGETVQVGNNLA 180

Query: 179 PNIPPTPLEDLSGVTVK 195
                T         + 
Sbjct: 181 RTGDVTVTGTNGDTVIH 197



 Score = 66.0 bits (159), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 20/136 (14%), Positives = 45/136 (33%), Gaps = 7/136 (5%)

Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG--KVIATMGLYSVDMSQG 168
            GS ++A       D +           +   G+       G   ++  + L  V+   G
Sbjct: 274 TGSPITAFNPQTSTDESGDTSSALSNISVGTDGKVTATFANGNQYILGAVALGDVNNRNG 333

Query: 169 FVRRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223
                N+  +       +     +     +V+ G LE SN +   E+  +I   + F + 
Sbjct: 334 LHSTGNANWTVTGTSGSLNYREADTSGLGSVQSGALELSNIDLTQELVNLISEQRNFQAN 393

Query: 224 TTLIDENEKSMLEAIR 239
           +  I  + + +   + 
Sbjct: 394 SKAISTDNQMVSYVMN 409


>gi|39933722|ref|NP_945998.1| flagellar hook protein FlgE [Rhodopseudomonas palustris CGA009]
 gi|39647569|emb|CAE26089.1| possible flagellar hook protein FlgE [Rhodopseudomonas palustris
           CGA009]
          Length = 421

 Score = 74.9 bits (182), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 3/117 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           + +  ++A  A  Q LS ++DN++N+DT G++T    FS++V A  +        V    
Sbjct: 6   ALSSAISALNAQSQSLSMISDNIANSDTTGYKTTSAMFSQLVTASSSATSYASGGVTVAG 65

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWF---ALESPRGIILTRDGRFKVTDDGSLVSA 117
                + G   +T    D A++G  +F      S      TR+G F + + G LV++
Sbjct: 66  RANISQQGLLAATSNATDVAIQGSGFFVVSDQTSGGTTSYTRNGAFSIDNAGYLVNS 122



 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/101 (11%), Positives = 27/101 (26%), Gaps = 5/101 (4%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLED 201
             + +   I  + + +     G         S                    +    LE 
Sbjct: 321 YSNGQTIAIYKIAVATFKDPDGLSVNSYGIYSVTAASGDASVQTSGSNGAGKIYGSELES 380

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  ++  +   MI   Q +++ + +I    K     I  + 
Sbjct: 381 STTDTSSQFASMISAQQAYSAASQVITTVNKMFDTLISAMR 421


>gi|56551507|ref|YP_162346.1| hypothetical protein ZMO0611 [Zymomonas mobilis subsp. mobilis ZM4]
 gi|56543081|gb|AAV89235.1| protein of unknown function DUF1078 domain protein [Zymomonas
           mobilis subsp. mobilis ZM4]
          Length = 411

 Score = 74.9 bits (182), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 71/196 (36%), Gaps = 5/196 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK-ISFVASG 62
           +F   L    A +  LS  ++N++N+ + GF+     F E+V        Q         
Sbjct: 2   AFYTSLTGLNAAQTDLSVTSNNIANSGSYGFKKTTTDFGELVADSPLASGQNIGQGTRLR 61

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALESP---RGIILTRDGRFKVTDDGSLVSASG 119
                   GS  +T   LD  + GD +F ++S      I LTRDG F    + ++V++ G
Sbjct: 62  ATIQDFTSGSMKTTNRALDMMVNGDGFFLVKSQGASGTISLTRDGSFLTDKNNNVVTSDG 121

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
            Y  +   +    I    E       G + +   + +     S+  + G   +  + ++ 
Sbjct: 122 HYLQVYATTNSGNIYNNGETG-SATGGRVVKNLTLPSYEDQVSISSATGETVQVGNNLAR 180

Query: 180 NIPPTPLEDLSGVTVK 195
               T         + 
Sbjct: 181 TGDVTVTGTNGDTVIH 196



 Score = 64.9 bits (156), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 14/94 (14%), Positives = 34/94 (36%), Gaps = 5/94 (5%)

Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSNAN 205
              ++  + L  V+   G     N+  +       +     +     +V+ G LE SN +
Sbjct: 315 NQYILGAVALGDVNNRNGLHSTGNANWTVTGTSGSLNYREADTSGLGSVQSGALELSNID 374

Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              E+  +I   + F + +  I  + + +   + 
Sbjct: 375 LTQELVNLISEQRNFQANSKAISTDNQMVSYVMN 408


>gi|259417834|ref|ZP_05741753.1| flagellar hook protein FlgE [Silicibacter sp. TrichCH4B]
 gi|259346740|gb|EEW58554.1| flagellar hook protein FlgE [Silicibacter sp. TrichCH4B]
          Length = 422

 Score = 74.9 bits (182), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 37/140 (26%), Positives = 62/140 (44%), Gaps = 9/140 (6%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
           +S N G+A   A   RL+ ++DN++N  T G++ +   F  +V + +N        V+  
Sbjct: 5   SSLNAGVAGLAANSTRLAAISDNIANASTAGYKRVVTSFESMVIS-QNGGSYAAGGVSVN 63

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALES--------PRGIILTRDGRFKVTDDGSL 114
              +  E  S IST    D A+ G  +  + S           ++LT  G F+  D+G L
Sbjct: 64  NTRMIDERSSLISTSNATDLAVAGRGFLPVASLAEVDSGGDPTMLLTTSGSFRTNDEGYL 123

Query: 115 VSASGKYPVLDMASVPIQIP 134
            + SG   +   A+    IP
Sbjct: 124 TTTSGLVLLGWPANADGTIP 143



 Score = 64.5 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 12/98 (12%), Positives = 32/98 (32%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLED 201
             +   +++  + L  +  + G    ++    P+                  V     E+
Sbjct: 322 YENGSSRIVYQIPLADMPNANGMKSLDSQTFMPSPDSGAYYLWDAGAGPTGEVASYRQEE 381

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           S  +   E+  MI   + ++S   +I   ++ + E   
Sbjct: 382 SGTDVATELTSMIQTQRAYSSNAKVIQTVDEMLQETTN 419


>gi|316936123|ref|YP_004111105.1| flagellar hook-basal body protein [Rhodopseudomonas palustris DX-1]
 gi|315603837|gb|ADU46372.1| flagellar hook-basal body protein [Rhodopseudomonas palustris DX-1]
          Length = 422

 Score = 74.9 bits (182), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 32/133 (24%), Positives = 58/133 (43%), Gaps = 3/133 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           + +  ++A  A  Q L+ ++DN++N+ TVG++T    FS++V A           V    
Sbjct: 6   ALSSAISALNAQSQSLAMISDNIANSQTVGYKTTSASFSQLVTAASGASTYSSGGVTVLA 65

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA---LESPRGIILTRDGRFKVTDDGSLVSASGK 120
                  G   +T +  D  + G+ +F      +    + TR G F + + G LV+ASG 
Sbjct: 66  RSNITTQGLLTTTTSSTDIGISGNGFFPVTTAVTGGTTLYTRGGSFTLDNSGYLVNASGA 125

Query: 121 YPVLDMASVPIQI 133
           Y +         +
Sbjct: 126 YLLGWRTDADGNV 138



 Score = 48.3 bits (113), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 14/101 (13%), Positives = 35/101 (34%), Gaps = 5/101 (4%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLED 201
             + K   I  + + +   +     ++N   +  +                +++ G LE 
Sbjct: 322 YSNGKTTTIYKVPVATFAAADQLEAKDNGMYAATLASGTAVVQLSGTNGAGSIEGGVLEA 381

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S +++  E   MI   Q +++ + +I    +     I  I 
Sbjct: 382 STSDTNTEFSSMISAQQAYSAASQVISAVNEMYDTLISAIR 422


>gi|238793998|ref|ZP_04637616.1| Flagellar hook protein FlgE [Yersinia intermedia ATCC 29909]
 gi|238726630|gb|EEQ18166.1| Flagellar hook protein FlgE [Yersinia intermedia ATCC 29909]
          Length = 425

 Score = 74.9 bits (182), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 68/192 (35%), Gaps = 11/192 (5%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
            F+  ++   A    L  + +N++N+ T GF+   V F+++         Q    V    
Sbjct: 2   GFSQAVSGLNAASSNLDVIGNNIANSATSGFKAGSVSFADMFA-----GSQTGMGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +T   LD A+    +F ++    G+   R+G+FK+ ++ ++V+  G   
Sbjct: 57  ITQDFNDGTPTTTNRRLDLAISQSGFFRMQDSSGGVFFARNGQFKLDENRNIVNMQGLSL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+          +        +S    +IA     S +M        +   +   P
Sbjct: 117 TGYPATGTPP-----TVQQGANPVPLSIPQDMIAAKATTSGNMVANLTSTHDVITATFDP 171

Query: 183 PTPLEDLSGVTV 194
             P        +
Sbjct: 172 QKPDTYSFVNNM 183



 Score = 70.3 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 22/210 (10%), Positives = 53/210 (25%), Gaps = 8/210 (3%)

Query: 35  RTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES 94
           +      ++             S   +     +  + S  +     DF L         +
Sbjct: 217 KDSSGTLADATKPFDPADPAAASLRGTMVFDTNGALKSVKNGAGTTDFNLTVPMAVVNGA 276

Query: 95  PRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV 154
           P           K  + G   +           +       +            +Q+ ++
Sbjct: 277 PAQTFALNVAGSKQQNTG---TDGIVTQNQTGYAAGEFTGFQINNDGSVVGTYSNQQTQL 333

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYE 209
           +  + L +    +G     ++                      T+  G LE SN +   E
Sbjct: 334 LGQIVLVNFSNPEGLSPEGDNVWKETKSSGNPILGTAGGGGFGTLTSGALESSNVDLSKE 393

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +  MI   + + S    I   ++ +   + 
Sbjct: 394 LVNMIVAQRNYQSNAQTIKTQDQILQTLVN 423


>gi|297568486|ref|YP_003689830.1| fagellar hook-basal body protein [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296924401|gb|ADH85211.1| fagellar hook-basal body protein [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 636

 Score = 74.9 bits (182), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 61/189 (32%), Gaps = 8/189 (4%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
                G++   ++   ++ + DN++N +TV ++  +  F  V+ + ++   +  +     
Sbjct: 5   NMMFNGMSGINSMAGNMAVLGDNVANINTVSYKNSQTTFQNVLTSSQDRFHEVGNGSQIQ 64

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDG-------RFKVTDDGSL 114
               +   G    T    D A+ G  +F +       + TRDG        +      +L
Sbjct: 65  AISKNFRPGPLEQTTKATDMAIGGKGFFMVNDYNGETLYTRDGQFDLKVEDYTPAGFYNL 124

Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174
           V+ +G               Q  +I    +    + +   +A     S            
Sbjct: 125 VTPAGYRVQGLNLDYGNGNGQPGDILVRRDSLPQATENVTLALNLQSSAAPPTDTTSLYE 184

Query: 175 SGISPNIPP 183
           S      PP
Sbjct: 185 SWNGAATPP 193



 Score = 63.3 bits (152), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 15/134 (11%), Positives = 36/134 (26%), Gaps = 5/134 (3%)

Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170
                S+S  +   D     +      +          + +    A + L       G +
Sbjct: 501 TNYATSSSTIFQDQDGYGAGVLQNVSVKPDGTIVGNYSNGQSHDQAQVMLADFANYHGLI 560

Query: 171 RRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225
              N+    +         +  +     V    LE SN +   +   +    + F + + 
Sbjct: 561 PGSNNTYQASAQSGDPVIGTPGSGVFGQVLGSSLEGSNVDLARQFADLTMTQRIFQANSK 620

Query: 226 LIDENEKSMLEAIR 239
            I   ++     +R
Sbjct: 621 SITTADEIHQTLMR 634


>gi|158422271|ref|YP_001523563.1| flagellar hook protein FlgE [Azorhizobium caulinodans ORS 571]
 gi|158329160|dbj|BAF86645.1| flagellar basal body FlaE protein [Azorhizobium caulinodans ORS
           571]
          Length = 430

 Score = 74.9 bits (182), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 68/192 (35%), Gaps = 3/192 (1%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
               ++   A   +L T++DN++N++T G++     FS ++    +  +     V +   
Sbjct: 7   LRTSVSGMNAQSNKLGTISDNIANSNTTGYKKATTDFSSLI-VDSSTSEYNSGSVNTKIS 65

Query: 65  YLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTD-DGSLVSASGKYP 122
           Y   + G+  S+ +  D  + GD +F ++   G    TR G F V    G+LV+ +G   
Sbjct: 66  YDISKQGTTTSSTSATDMMVNGDGFFVVQDGGGSTYLTRAGSFTVDATTGNLVNTAGYTL 125

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
           +    S    +              I             ++  +        SG +P   
Sbjct: 126 MGYDISKGNNVTPVVNSTAGMVPVNIGSIALAAVPTTSGTMTANLQSTSAVVSGATPGGN 185

Query: 183 PTPLEDLSGVTV 194
                     +V
Sbjct: 186 TAAATYTYKSSV 197



 Score = 63.0 bits (151), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 10/94 (10%), Positives = 28/94 (29%), Gaps = 5/94 (5%)

Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNAN 205
               +  + + +V           +          ++          T+K   LE+SN +
Sbjct: 334 NTTNLYRIPVATVKSPDNLTPVSGNAYQVTQESGAMQIGLSGSAGVGTIKSNTLENSNVD 393

Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              E+  MI   + + + + +       +   + 
Sbjct: 394 VASELTDMIVAQRDYTANSKVFQTGTDLLDVLMN 427


>gi|77464881|ref|YP_354385.1| putative flagellar hook protein [Rhodobacter sphaeroides 2.4.1]
 gi|126463723|ref|YP_001044837.1| hypothetical protein Rsph17029_2963 [Rhodobacter sphaeroides ATCC
           17029]
 gi|221640802|ref|YP_002527064.1| hypothetical protein RSKD131_2703 [Rhodobacter sphaeroides KD131]
 gi|332559780|ref|ZP_08414102.1| FlgE2 [Rhodobacter sphaeroides WS8N]
 gi|77389299|gb|ABA80484.1| putative flagellar hook protein [Rhodobacter sphaeroides 2.4.1]
 gi|126105387|gb|ABN78065.1| protein of unknown function DUF1078 domain protein [Rhodobacter
           sphaeroides ATCC 17029]
 gi|221161583|gb|ACM02563.1| Hypothetical Protein RSKD131_2703 [Rhodobacter sphaeroides KD131]
 gi|332277492|gb|EGJ22807.1| FlgE2 [Rhodobacter sphaeroides WS8N]
          Length = 465

 Score = 74.9 bits (182), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 36/164 (21%), Positives = 64/164 (39%), Gaps = 10/164 (6%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV-GAIKNDIDQKISFVAS 61
           +S N G+A   A   +L+T+ADN++N+ T G++     F  +V     N        V +
Sbjct: 5   SSLNAGVAGLNANATKLATIADNIANSGTYGYKRADADFESMVITQSANGGSYAAGGVRA 64

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG---------IILTRDGRFKVTDDG 112
                 +E G+ +ST + LD A+ G     +              +++TR G F     G
Sbjct: 65  NTIRRVEEWGAPVSTASALDIAISGRGMLPVIRETSLGASSGNEALLMTRTGSFATDPSG 124

Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156
            L + +G   +   A+    IP          +  +    +  A
Sbjct: 125 VLKTDTGLVLLGWPATADGTIPTMSRDSIAQLEPVVIAANQTAA 168



 Score = 68.4 bits (165), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 15/103 (14%), Positives = 30/103 (29%), Gaps = 5/103 (4%)

Query: 142 VGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKR 196
                  +   +VI  + L  V    G     N   + +            D     V  
Sbjct: 360 FMRATYDTGFTRVIYQVPLVDVPNYNGLTALNNQTFAISPDSGNFYLWDAGDGPTGDVLG 419

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              E S  +   E+  +I   + ++S   +I   ++ + E   
Sbjct: 420 YAREGSTTDVATELTNLIQTQRAYSSNAKIIQTVDEMLQETTN 462


>gi|207108222|ref|ZP_03242384.1| flagellar basal-body rod protein (flgG) [Helicobacter pylori
           HPKX_438_CA4C1]
          Length = 137

 Score = 74.9 bits (182), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 34/137 (24%), Positives = 56/137 (40%), Gaps = 18/137 (13%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDID---- 53
           MQ  +     A      RL   ++N++N +T GF+        F  +    +  +     
Sbjct: 1   MQNGYYAATGAMATQFNRLDLTSNNLANLNTNGFKRDDAITGDFLRLYQQYREQLPLEDQ 60

Query: 54  ----------QKISFVASGKEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTR 102
                              + Y  + +G+F  T   LDFAL   + +FA+++  G+  TR
Sbjct: 61  TKASAKYLNRNLNRVPILSEIYTDRSLGAFEETHNPLDFALTSPNLYFAIQTNEGVAYTR 120

Query: 103 DGRFKVTDDGSLVSASG 119
           DG F V  DG LV+ +G
Sbjct: 121 DGHFSVDKDGFLVTLNG 137


>gi|149189836|ref|ZP_01868116.1| flagellar hook protein E [Vibrio shilonii AK1]
 gi|148836322|gb|EDL53279.1| flagellar hook protein E [Vibrio shilonii AK1]
          Length = 398

 Score = 74.9 bits (182), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 54/131 (41%), Gaps = 6/131 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SF+I L+   A   +L+T++ N++N  T GF+  + +FS V      +  Q      +  
Sbjct: 2   SFDIALSGLDATNTQLNTISHNIANASTYGFKEARTEFSAVY-----NGMQAGGVEVASI 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122
                + GS   TG  +D A+ G+ +F  +      + TR G F    D  +V  +G   
Sbjct: 57  SQNFDKNGSVSGTGRAMDLAINGNGFFVTKDHMGQTLYTRAGVFGTDKDNYVVGNTGAKL 116

Query: 123 VLDMASVPIQI 133
                     +
Sbjct: 117 QGYGVDSNNNL 127



 Score = 74.5 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 17/134 (12%), Positives = 44/134 (32%), Gaps = 9/134 (6%)

Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172
             VS +            +++     +F     G+   +G+V+    L +    QG  + 
Sbjct: 269 FGVSTNNPNGYTSGELAGVRVEDNGMVFATYTNGQSQLQGQVV----LANFANPQGLAKT 324

Query: 173 ENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
             +  + +         +  +     +  G LE SN +   E+  ++   + + +    I
Sbjct: 325 NGTAWTQSYGSGAPVMGTPGSGVLGDLTPGALEGSNVDLTSELVNLMTAQRNYQANAKTI 384

Query: 228 DENEKSMLEAIRNI 241
             ++K        +
Sbjct: 385 STSDKLTQALFNAV 398


>gi|170021360|ref|YP_001726314.1| flagellar basal body FlaE domain-containing protein [Escherichia
           coli ATCC 8739]
 gi|169756288|gb|ACA78987.1| flagellar basal body FlaE domain protein [Escherichia coli ATCC
           8739]
          Length = 400

 Score = 74.9 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 40/187 (21%), Positives = 69/187 (36%), Gaps = 6/187 (3%)

Query: 7   IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66
           I      A+ ++L  +++N++N  TVG++++  +FS +         Q +    +G    
Sbjct: 5   IAATGLNAVNEQLDGISNNIANAGTVGYKSMTTQFSAMYA-----GSQAMGVSVAGTAQS 59

Query: 67  SKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125
               GS +STG  LD A+  D +F   +S   I  TR G F+   +G +V+ASG Y    
Sbjct: 60  ISRGGSLVSTGNALDLAINDDGFFVTCDSAGNISYTRAGSFETDKNGYIVNASGAYLQGY 119

Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185
                  +          + G I  +     T             R      + N     
Sbjct: 120 PVDDSGTLQTGTVTDIQIKTGNIPAQASSSLTFTANFDASDAAIDRTTVPFDATNSSSYT 179

Query: 186 LEDLSGV 192
               + V
Sbjct: 180 DSYTTTV 186



 Score = 68.7 bits (166), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 55/194 (28%), Gaps = 10/194 (5%)

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113
           Q            +  +    +TG            F  ++   I LT D          
Sbjct: 211 QYTFDGQQQTGVPATTLTFDPNTGKLTSPTTPQTIEFQTDAAAPIDLTVDYSTCTQYGSE 270

Query: 114 L-VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172
             V+ +            +Q+    +++     GE   +G+V+    L +     G    
Sbjct: 271 FSVTTNAANGYASATQNGVQVDDDGKVYATYSNGERMLQGQVV----LATFPNENGLEAV 326

Query: 173 ENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
             +                      T+  G LE SN +   E+  ++   + + + T +I
Sbjct: 327 SGTAWVQTGESGTPLIGVPGSGTCGTLSSGVLESSNVDITSELVNLMTAQRNYQANTKVI 386

Query: 228 DENEKSMLEAIRNI 241
             + +      + +
Sbjct: 387 ATSTQLDDALFQAM 400


>gi|188494513|ref|ZP_03001783.1| Flagellar basal body protein FlgE [Escherichia coli 53638]
 gi|188489712|gb|EDU64815.1| Flagellar basal body protein FlgE [Escherichia coli 53638]
          Length = 400

 Score = 74.9 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 40/187 (21%), Positives = 69/187 (36%), Gaps = 6/187 (3%)

Query: 7   IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66
           I      A+ ++L  +++N++N  TVG++++  +FS +         Q +    +G    
Sbjct: 5   IAATGLNAVNEQLDGISNNIANAGTVGYKSMTTQFSAMYA-----GSQAMGVSVAGTAQS 59

Query: 67  SKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125
               GS +STG  LD A+  D +F   +S   I  TR G F+   +G +V+ASG Y    
Sbjct: 60  ISRGGSLVSTGNALDLAINDDGFFVTCDSAGNISYTRAGSFETDKNGYIVNASGAYLQGY 119

Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185
                  +          + G I  +     T             R      + N     
Sbjct: 120 PVDDTGTLQTGTVTDIQIKTGNIPAQASSSLTFTANFDASDAAIDRTTVPFDATNSSSYT 179

Query: 186 LEDLSGV 192
               + V
Sbjct: 180 DSYTTTV 186



 Score = 68.7 bits (166), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 55/194 (28%), Gaps = 10/194 (5%)

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113
           Q            +  +    +TG            F  ++   I LT D          
Sbjct: 211 QYTFDGQQQTGVPATTLTFDPNTGKLTSPTTPQTIEFQTDAAAPIDLTVDYSTCTQYGSE 270

Query: 114 L-VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172
             V+ +            +Q+    +++     GE   +G+V+    L +     G    
Sbjct: 271 FSVTTNAANGYASATQNGVQVDDDGKVYATYSNGERMLQGQVV----LATFPNENGLEAV 326

Query: 173 ENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
             +                      T+  G LE SN +   E+  ++   + + + T +I
Sbjct: 327 SGTAWVQTGESGTPLIGVPGSGTCGTLSSGVLESSNVDITSELVNLMTAQRNYQANTKVI 386

Query: 228 DENEKSMLEAIRNI 241
             + +      + +
Sbjct: 387 ATSTQLDDALFQAM 400


>gi|257484946|ref|ZP_05638987.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 120

 Score = 74.9 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 49/120 (40%), Gaps = 3/120 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + ++            A+N++N  T GF     +   +   +  ++    ++  
Sbjct: 1   MDKLLYVAMSGASENAIAQKAHANNLANVSTNGFMRDLEQARSM--PVFGEVMPSRAYAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           S +       G+ + TG ELD A++GD W A+++P  G   TR     +   G L   SG
Sbjct: 59  SERPGTDFSAGAMVETGRELDIAVKGDGWIAVQTPDGGEAYTRSSGMNIDALGVLRDGSG 118


>gi|168234103|ref|ZP_02659161.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|194468943|ref|ZP_03074927.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194455307|gb|EDX44146.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|205331935|gb|EDZ18699.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
          Length = 425

 Score = 74.9 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 71/195 (36%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SF+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   SFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ +LV+  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGMQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q+                K   T  +     S      +N     +  
Sbjct: 117 TGYPATGTPPTIQQGANPAPITIPNTLMAAKSTTTASMQVNLNSTDAKPAKNPFDPSDAN 176

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 177 TYNKKGSITVYDSQG 191



 Score = 74.1 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 13/122 (10%), Positives = 39/122 (31%), Gaps = 5/122 (4%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             +       +  +            +++ +V+  + L +   ++G   + ++  +    
Sbjct: 302 NQNGYKPGDLVSYQINNDGTVVGNYSNEQEQVLGQIVLANFANNEGLASQGDNVWAATQA 361

Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                       +   +  G LE SN +   E+  MI   + + S    I   ++ +   
Sbjct: 362 SGVALLGTAGSGNFGKLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 421

Query: 238 IR 239
           + 
Sbjct: 422 VN 423


>gi|157371207|ref|YP_001479196.1| flagellar hook protein FlgE [Serratia proteamaculans 568]
 gi|157322971|gb|ABV42068.1| flagellar basal body FlaE domain protein [Serratia proteamaculans
           568]
          Length = 407

 Score = 74.9 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 14/123 (11%), Positives = 34/123 (27%), Gaps = 5/123 (4%)

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
              D          +            +Q+ +V+  + + +    +G   + ++      
Sbjct: 283 VSQDGYGAGEYTNFQINNDGTVVGIYSNQQTQVLGQIVMANFSNPEGLSSQGDNVWQETG 342

Query: 182 PPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                            +  G LE SN +   E+  MI   + + S    I   +  +  
Sbjct: 343 ASGQPRVGIAGGGGFGKLTSGALEASNVDLSQELVNMIVAQRNYQSNAQTIKTQDSILQT 402

Query: 237 AIR 239
            + 
Sbjct: 403 LVS 405



 Score = 73.7 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 61/134 (45%), Gaps = 6/134 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++  V F+++         Q    V    
Sbjct: 2   AFSQAVSGLNAAATNLDVIGNNIANSATSGFKSGTVSFADMFA-----GSQVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122
              + + G+   T   LD A+ G+ +F ++    G+  +R+G+FK+ ++ +L +  G   
Sbjct: 57  ITQNFKGGTTTGTSRALDVAISGNGFFRMQDQDGGVFYSRNGQFKLDENRNLTNMQGLQL 116

Query: 123 VLDMASVPIQIPQK 136
               A+      Q+
Sbjct: 117 TGYPAAGTPPTIQQ 130


>gi|126176156|ref|YP_001052305.1| flagellar hook protein FlgE [Shewanella baltica OS155]
 gi|304412508|ref|ZP_07394114.1| fagellar hook-basal body protein [Shewanella baltica OS183]
 gi|307307167|ref|ZP_07586905.1| fagellar hook-basal body protein [Shewanella baltica BA175]
 gi|125999361|gb|ABN63436.1| flagellar basal body FlaE domain protein [Shewanella baltica OS155]
 gi|304349150|gb|EFM13562.1| fagellar hook-basal body protein [Shewanella baltica OS183]
 gi|306910406|gb|EFN40837.1| fagellar hook-basal body protein [Shewanella baltica BA175]
          Length = 395

 Score = 74.9 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 6/133 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SFNI L+   A  Q L+T+++N++N  T GFR  + +F+ +      +  Q         
Sbjct: 2   SFNIALSGLQATTQDLNTISNNIANASTSGFRGGRSEFASIY-----NGGQAGGVGVMST 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLVSASGKYP 122
                + GS   TG +LD  ++G+ +F L+   G     R G F    +G +    G   
Sbjct: 57  SQNFSKGGSLTYTGRQLDMGIQGEGFFVLKGNDGGAMYARAGMFHKDSEGFITDPVGSRL 116

Query: 123 VLDMASVPIQIPQ 135
                +   +I Q
Sbjct: 117 QGYSVNATGKIQQ 129



 Score = 67.2 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 18/143 (12%), Positives = 37/143 (25%), Gaps = 6/143 (4%)

Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI-ATMGLYSV 163
                      +      +        ++       N    G  +     +   + L + 
Sbjct: 253 DINFDKSTQYAAKYNNSSLSQDGYTSGELKGVRLDDNGMLYGTYTNGQDQLQGQVILANF 312

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRG-----FLEDSNANSMYEMGQMIHLTQ 218
               G     N+              S  T   G     +LE SN ++  EM  ++   +
Sbjct: 313 SNPNGLSAVSNNAWVATNTAGQAITGSPSTGTMGTVTGGYLEGSNVDTTAEMVNLMSAQR 372

Query: 219 KFNSITTLIDENEKSMLEAIRNI 241
            + S   ++D N       +  I
Sbjct: 373 NYQSNAKVLDVNSTMQQALLNAI 395


>gi|238762359|ref|ZP_04623330.1| Lateral flagellar hook protein (FlgE-like) [Yersinia kristensenii
           ATCC 33638]
 gi|238699344|gb|EEP92090.1| Lateral flagellar hook protein (FlgE-like) [Yersinia kristensenii
           ATCC 33638]
          Length = 397

 Score = 74.9 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/132 (27%), Positives = 65/132 (49%), Gaps = 6/132 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SF+I      A+ ++L+T+++N++N+ T GF++ + +FS +         Q +    SG 
Sbjct: 2   SFSIANTGLSAVTEQLNTISNNIANSATKGFKSGRTEFSSMYAQ-----SQPLGVGVSGT 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASGKYP 122
               ++ GS   TG  +D A+ G+ +F +++       TR G F   ++G LV+ASG   
Sbjct: 57  SQSIRKEGSIDRTGNAMDLAISGNGFFVVKNSNGDEAYTRAGMFTTDNNGLLVNASGMKL 116

Query: 123 VLDMASVPIQIP 134
               A     I 
Sbjct: 117 QGYSADATGNIQ 128



 Score = 68.4 bits (165), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 14/94 (14%), Positives = 34/94 (36%), Gaps = 5/94 (5%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSM 207
            +   + L +   + G   +  +  S           +  T     ++ G LE SN +  
Sbjct: 304 MLQGKLALANFANANGLAAQNGTTWSATSKSGAALLGAPGTGLLGGIEVGALEASNVDLT 363

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
            E+  ++   + + + T +I  N+  M    + +
Sbjct: 364 AELVGLMTAQRNYQANTKIISTNDSMMNALFQVL 397


>gi|333004885|gb|EGK24405.1| flagellar hook protein flgE [Shigella flexneri VA-6]
          Length = 399

 Score = 74.9 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 71/195 (36%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ +L++  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLLNMQGLQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q+                K   T  +     S   +       + N  
Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNAD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 177 SYNKKGSVTVFDSQG 191



 Score = 71.1 bits (172), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             +       +  +            +++ +++  + L +   ++G     ++  S    
Sbjct: 276 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 335

Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                       +  T+  G LE SN +   E+  MI   + + S    I   ++ +   
Sbjct: 336 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTR 395

Query: 238 IR 239
           + 
Sbjct: 396 VN 397


>gi|260431756|ref|ZP_05785727.1| flagellar hook protein FlgE [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260415584|gb|EEX08843.1| flagellar hook protein FlgE [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 439

 Score = 74.5 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 8/140 (5%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
           +S N G+AA  A   RL+T++DN++N+ T G++ ++  F  +V A +         V + 
Sbjct: 13  SSLNAGVAALKANANRLATISDNIANSSTFGYKRVETDFHSMVTAGQGGSYSAG-GVRTT 71

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-------ILTRDGRFKVTDDGSLV 115
            + L  + GS ++T    D A++G     +     I       +LT  G F+   +G LV
Sbjct: 72  SQRLIDQRGSLVTTNNSTDLAVQGRGLLPVRPSSQIGTPSNEMLLTTTGSFRTNAEGYLV 131

Query: 116 SASGKYPVLDMASVPIQIPQ 135
           + SG   +   A+    IP 
Sbjct: 132 TESGLVLLGWPANSDGSIPN 151



 Score = 68.0 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 14/120 (11%), Positives = 37/120 (30%), Gaps = 5/120 (4%)

Query: 125 DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP- 183
           D ++V      + +          +   + +  + L  V    G     +   +P+    
Sbjct: 317 DGSAVGTMASVEIDENGYVYALYDTGVTRRMYQIPLADVPNPNGLTALNSQTYAPSRESG 376

Query: 184 ----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
                   +     +     E+S  +   E+  MI   + ++S   +I   ++ + E   
Sbjct: 377 TYFLWNAGEGPTGELISFAREESTTDVATELTSMIQTQRAYSSSAKVIQTVDEMLQETTN 436


>gi|237799636|ref|ZP_04588097.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331022491|gb|EGI02548.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 121

 Score = 74.5 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 49/120 (40%), Gaps = 3/120 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + ++            A+N++N  T GF     +   +   +  ++    ++  
Sbjct: 1   MDKLLYVAMSGASENAIAQKAHANNLANVSTNGFMRDLEQARSM--PVFGEVMPSRAYAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           S +       G+ + TG ELD A++GD W A+++P  G   TR     +   G L   SG
Sbjct: 59  SERPGTDFSAGAMVQTGRELDIAVKGDGWIAVQTPDGGEAYTRSSGMNIDALGVLRDGSG 118


>gi|323975930|gb|EGB71024.1| fagellar hook-basal body protein [Escherichia coli TW10509]
          Length = 400

 Score = 74.5 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 41/187 (21%), Positives = 69/187 (36%), Gaps = 6/187 (3%)

Query: 7   IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66
           I      A+ ++L  +++N++N  TVG++++  +FS +         Q +    +G    
Sbjct: 5   IAATGLNAVNEQLDGISNNIANAGTVGYKSMTTQFSAMYA-----GSQAMGVSVAGTAQS 59

Query: 67  SKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125
               GS +STG  LD A+  D +F + +S   I  TR G F+   DG +V+ASG Y    
Sbjct: 60  ISRGGSLVSTGNALDLAINDDGFFVMCDSAGNISYTRAGSFETDKDGYIVNASGAYLQGY 119

Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185
                  +          + G I  +     T             R        N     
Sbjct: 120 PVDDSGTLQTGTVTDIQIKTGNIPAQASSSLTFTANFDASDDAIDRTTVPFDPTNSSSYT 179

Query: 186 LEDLSGV 192
               + V
Sbjct: 180 DSYTTTV 186



 Score = 68.7 bits (166), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 55/194 (28%), Gaps = 10/194 (5%)

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113
           Q            +  +    +TG            F  ++   I LT D          
Sbjct: 211 QYTFDGQQQTGVPATTLTFDPNTGKLTSPTTPQTIEFQTDAAAPIDLTVDYSTCTQYGSE 270

Query: 114 L-VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172
             V+ +            +Q+    +++     GE   +G+V+    L +     G    
Sbjct: 271 FSVTTNSANGYASATQNGVQVDDDGKVYATYSNGERMLQGQVV----LATFPNENGLEAV 326

Query: 173 ENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
             +                      T+  G LE SN +   E+  ++   + + + T +I
Sbjct: 327 SGTAWVQTGESGTPLIGVPGSGTCGTLSSGVLESSNVDITSELVNLMTAQRNYQANTKVI 386

Query: 228 DENEKSMLEAIRNI 241
             + +      + +
Sbjct: 387 ATSTQLDDALFQAM 400


>gi|260752886|ref|YP_003225779.1| hypothetical protein Za10_0647 [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
 gi|258552249|gb|ACV75195.1| protein of unknown function DUF1078 domain protein [Zymomonas
           mobilis subsp. mobilis NCIMB 11163]
          Length = 417

 Score = 74.5 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 66/198 (33%), Gaps = 4/198 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK-NDIDQKISFVASG 62
           +F   L    A +  LS  ++N++N+ + GF+     F E+V                  
Sbjct: 2   AFYTSLTGLNAAQTDLSVTSNNIANSGSYGFKKTTTDFGELVADSPYASAKNIGQGTRLR 61

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALESP---RGIILTRDGRFKVTDDGSLVSASG 119
                   GS  +T   LD  + GD +F ++S      I LTRDG F    + ++V++ G
Sbjct: 62  ATIQDFTSGSMKTTNRALDMMVNGDGFFLVKSQGASGTISLTRDGSFLTDKNNNVVTSDG 121

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
            Y  +   +    I    +  +      +           +         V+  N+  + 
Sbjct: 122 HYLQVYATTNSGDIYNNGQTGSATGGRTVKNLTLPSYEDQVSISATDGNTVQVGNNLAAT 181

Query: 180 NIPPTPLEDLSGVTVKRG 197
                    +    +  G
Sbjct: 182 GTVKIGGTVIENAKITLG 199



 Score = 64.9 bits (156), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 14/94 (14%), Positives = 34/94 (36%), Gaps = 5/94 (5%)

Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSNAN 205
              ++  + L  V+   G     N+  +       +     +     +V+ G LE SN +
Sbjct: 321 NQYILGAVALGDVNNRNGLHSTGNANWTVTGTSGSLNYREADTSGLGSVQSGALELSNID 380

Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              E+  +I   + F + +  I  + + +   + 
Sbjct: 381 LTQELVNLISEQRNFQANSKAISTDNQMVSYVMN 414


>gi|293395583|ref|ZP_06639866.1| flagellar hook protein FlgE [Serratia odorifera DSM 4582]
 gi|291421902|gb|EFE95148.1| flagellar hook protein FlgE [Serratia odorifera DSM 4582]
          Length = 411

 Score = 74.5 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 61/134 (45%), Gaps = 6/134 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++  V F+++         Q    V    
Sbjct: 2   AFSQAVSGLNAAATNLDVIGNNIANSATAGFKSGSVSFADMFA-----GSQVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASGKYP 122
              +   G+  ST   LD A+  + +F ++    GI  +R+G+FK+ ++ +LV+  G   
Sbjct: 57  ITQNFNGGTTTSTNRALDVAITENGFFRMQDSDGGIFYSRNGQFKLDENRNLVNMQGLNL 116

Query: 123 VLDMASVPIQIPQK 136
               A+      Q+
Sbjct: 117 TGYPAAGTPPTIQQ 130



 Score = 72.2 bits (175), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 15/123 (12%), Positives = 36/123 (29%), Gaps = 5/123 (4%)

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
              +  +       + E          +Q+ +V+  + L +    +G   + ++      
Sbjct: 287 VAQNGYTAGEYNNFQIEKDGTVVGIYSNQQKQVLGQIVLANFSNPEGLASKGDNVWQETG 346

Query: 182 PPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                            +  G LE SN +   E+  MI   + + S    I   +  +  
Sbjct: 347 ASGQPRVGTAGGGGFGNLTSGALEASNVDLSQELVNMIVAQRNYQSNAQTIKTQDSILQT 406

Query: 237 AIR 239
            + 
Sbjct: 407 LVS 409


>gi|306813303|ref|ZP_07447496.1| flagellar basal body FlaE domain-containing protein [Escherichia
           coli NC101]
 gi|305854066|gb|EFM54505.1| flagellar basal body FlaE domain-containing protein [Escherichia
           coli NC101]
          Length = 400

 Score = 74.5 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 40/187 (21%), Positives = 69/187 (36%), Gaps = 6/187 (3%)

Query: 7   IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66
           I      A+ ++L  +++N++N  TVG++++  +FS +         Q +    +G    
Sbjct: 5   IAATGLNAVNEQLDGISNNIANAGTVGYKSMTTQFSAMYA-----GSQAMGVSVAGTAQS 59

Query: 67  SKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125
               GS +STG  LD A+  D +F   +S   I  TR G F+   +G +V+ASG Y    
Sbjct: 60  ISRGGSLVSTGNALDLAINDDGFFVTCDSAGNISYTRAGSFETDKNGYIVNASGAYLQGY 119

Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185
                  +          + G I  +     T             R      + N     
Sbjct: 120 PVDDTGTLQTGTVTDIQIKTGNIPAQASSSLTFTANFDASDAAIDRTTVPFDATNSSSYT 179

Query: 186 LEDLSGV 192
               + V
Sbjct: 180 DSYTTTV 186



 Score = 68.4 bits (165), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 55/194 (28%), Gaps = 10/194 (5%)

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113
           Q            +  +    +TG            F  ++   I LT D          
Sbjct: 211 QYTFDGQQQTGVPATTLTFDPNTGKLTSPNTPQTIEFQTDAAAPIDLTVDYSSCTQYGSE 270

Query: 114 L-VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172
             V+ +            +Q+    +++     GE   +G+V+    L +     G    
Sbjct: 271 FSVTTNAANGYASATQNGVQVDDDGKVYATYSNGERMLQGQVV----LATFPNENGLEAV 326

Query: 173 ENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
             +                      T+  G LE SN +   E+  ++   + + + T +I
Sbjct: 327 SGTAWVQTGESGTPLIGVPGSGTCGTLSSGVLESSNVDITSELVNLMTAQRNYQANTKVI 386

Query: 228 DENEKSMLEAIRNI 241
             + +      + +
Sbjct: 387 ATSTQLDDALFQAM 400


>gi|322616547|gb|EFY13456.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322620512|gb|EFY17376.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322622506|gb|EFY19351.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322629657|gb|EFY26432.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322632623|gb|EFY29369.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322636882|gb|EFY33585.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322641580|gb|EFY38218.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322644070|gb|EFY40616.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322650030|gb|EFY46448.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322653955|gb|EFY50278.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322658487|gb|EFY54749.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322663345|gb|EFY59547.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322670079|gb|EFY66219.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322674857|gb|EFY70948.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322676673|gb|EFY72740.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322682595|gb|EFY78614.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322686652|gb|EFY82631.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|323195766|gb|EFZ80942.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323198342|gb|EFZ83446.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323203174|gb|EFZ88204.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323209177|gb|EFZ94114.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323209681|gb|EFZ94610.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
 gi|323217863|gb|EGA02578.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323222151|gb|EGA06535.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323224923|gb|EGA09181.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323229665|gb|EGA13788.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323232890|gb|EGA16986.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323240625|gb|EGA24667.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323242939|gb|EGA26960.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323250256|gb|EGA34145.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323252631|gb|EGA36469.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323258841|gb|EGA42494.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323261030|gb|EGA44623.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323266939|gb|EGA50424.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323269980|gb|EGA53429.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
          Length = 403

 Score = 74.5 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 71/195 (36%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SF+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   SFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ +LV+  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGMQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q+                K   T  +     S   V  +      +  
Sbjct: 117 TGYPATGTPPTIQQGANPAPITIPNTLMAAKSTTTASMQINLNSTDPVPSKTPFSVSDAD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 177 SYNKKGTVTVYDSQG 191



 Score = 73.7 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 15/147 (10%), Positives = 45/147 (30%), Gaps = 5/147 (3%)

Query: 98  IILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157
              T    F  +   +  + +      +       +  +            +++ +V+  
Sbjct: 255 TAATFSLSFLNSMQQNTGANNIIATNQNGYKPGDLVSYQINNDGTVVGNYSNEQEQVLGQ 314

Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQ 212
           + L +   ++G   + ++  +                +   +  G LE SN +   E+  
Sbjct: 315 IVLANFANNEGLASQGDNVWAATQASGVALLGTAGSGNFGKLTNGALEASNVDLSKELVN 374

Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIR 239
           MI   + + S    I   ++ +   + 
Sbjct: 375 MIVAQRNYQSNAQTIKTQDQILNTLVN 401


>gi|306814075|ref|ZP_07448248.1| flagellar hook protein FlgE [Escherichia coli NC101]
 gi|305852712|gb|EFM53160.1| flagellar hook protein FlgE [Escherichia coli NC101]
          Length = 401

 Score = 74.5 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 72/195 (36%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++        L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   AFSQAVSGLNVAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ +LV+  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q+                K   T  +     S   +   N+  + N  
Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPSVNTFDASNAD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 177 SYNKKGSVTVFDSQG 191



 Score = 72.2 bits (175), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             +       +  +            +++ +++  + L +   ++G     ++  S    
Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 337

Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                       +  T+  G LE SN +   E+  MI   + + S    I   ++ +   
Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397

Query: 238 IR 239
           + 
Sbjct: 398 VN 399


>gi|218681813|ref|ZP_03529560.1| flagellar hook protein FlgE [Rhizobium etli CIAT 894]
          Length = 400

 Score = 74.5 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 17/121 (14%), Positives = 35/121 (28%), Gaps = 1/121 (0%)

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178
                  +  V I               +   +  +        + +  G V   N    
Sbjct: 278 NGQAASPVKDVTIDGDGIVYAKYEDGTNKPLYRIPLANVASPDKLTLMSGNVYSANGQSG 337

Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
             +   P  +    T+K G LE SN +   E+ +MI   + + + + +       M   +
Sbjct: 338 VTVTGFPQTNG-LGTIKSGALEGSNVDLAGELTEMIEAQRSYTANSKVFQTGSDIMDVLV 396

Query: 239 R 239
            
Sbjct: 397 N 397


>gi|312884834|ref|ZP_07744526.1| flagellar hook protein FlgE [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309367486|gb|EFP95046.1| flagellar hook protein FlgE [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 398

 Score = 74.5 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/131 (25%), Positives = 52/131 (39%), Gaps = 6/131 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SFNI L+   A    L+T++ N++N  T GF+  + +FS V      +  Q      +  
Sbjct: 2   SFNIALSGLDATNTDLNTISHNIANASTTGFKGARTEFSAVY-----NGMQPGGVEVASI 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122
                + GS   TG  +D A+ G  +F  +        TR G F    D  LVS +G   
Sbjct: 57  SQNFDKNGSISGTGRPMDLAINGTGFFVTKDSTGQTQYTRAGVFNRDKDNFLVSNTGAKL 116

Query: 123 VLDMASVPIQI 133
                     +
Sbjct: 117 QGYSVDGNNNL 127



 Score = 72.6 bits (176), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 28/227 (12%), Positives = 62/227 (27%), Gaps = 17/227 (7%)

Query: 30  DTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAW 89
           +T  F +      +V  ++ N+ +    F  +G       V    +       A+  ++ 
Sbjct: 174 NTNSFNSSYST--KVYDSLGNEHNVNQYFTKTGPNTWQVNVQVDGAATPSATIAMNFNSD 231

Query: 90  FALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFN-------- 141
            +L++P                   V  SG         V                    
Sbjct: 232 GSLQTPTAPYSVAFPAAGAQPMNIQVDLSGSTQFGAAFGVSTNSHNGYTSGELVGARVED 291

Query: 142 --VGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----V 194
                    + + ++   + L      QG V+   +  + +            T     +
Sbjct: 292 SGRVYATYTNGQSQLQGQVVLADFANPQGLVKVNGTAWTQSFSSGAPIVGVPGTGTLGDL 351

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
             G LE SN +   E+  ++   + + +    I  N+K        +
Sbjct: 352 SPGALEGSNVDLTSELVNLMTAQRNYQANAKTISTNDKLTQALFNAV 398


>gi|16760053|ref|NP_455670.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|16764533|ref|NP_460148.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|29142176|ref|NP_805518.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|62179694|ref|YP_216111.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|167553035|ref|ZP_02346785.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|167994041|ref|ZP_02575133.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|168264030|ref|ZP_02686003.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|168467129|ref|ZP_02700971.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|168822620|ref|ZP_02834620.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|194442954|ref|YP_002040431.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|197250199|ref|YP_002146866.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197265088|ref|ZP_03165162.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|198245171|ref|YP_002215960.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|204930842|ref|ZP_03221715.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205353085|ref|YP_002226886.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207857315|ref|YP_002243966.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|213161844|ref|ZP_03347554.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
 gi|213424680|ref|ZP_03357445.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
 gi|213582037|ref|ZP_03363863.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
 gi|213648926|ref|ZP_03378979.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
 gi|213865505|ref|ZP_03387624.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
 gi|224584319|ref|YP_002638117.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|238911003|ref|ZP_04654840.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
 gi|289806609|ref|ZP_06537238.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
 gi|289828580|ref|ZP_06546405.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
 gi|60392287|sp|P0A1J1|FLGE_SALTY RecName: Full=Flagellar hook protein flgE
 gi|60392288|sp|P0A1J2|FLGE_SALTI RecName: Full=Flagellar hook protein flgE
 gi|25511789|pir||AB0640 flagellar hook protein FlgE [imported] - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|47673|emb|CAA36022.1| flgE protein (AA 1-403) [Salmonella enterica subsp. enterica
           serovar Typhimurium]
 gi|16419694|gb|AAL20107.1| hook protein [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|16502347|emb|CAD08301.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29137806|gb|AAO69367.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|62127327|gb|AAX65030.1| flagellar biosynthesis, hook protein [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|194401617|gb|ACF61839.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|195630413|gb|EDX49039.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|197213902|gb|ACH51299.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197243343|gb|EDY25963.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197939687|gb|ACH77020.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|204320301|gb|EDZ05505.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205272866|emb|CAR37795.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|205322416|gb|EDZ10255.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|205328054|gb|EDZ14818.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|205341012|gb|EDZ27776.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|205347322|gb|EDZ33953.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|206709118|emb|CAR33451.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|224468846|gb|ACN46676.1| flagellar hook protein [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|261246388|emb|CBG24197.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267992951|gb|ACY87836.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301157718|emb|CBW17210.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312912164|dbj|BAJ36138.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|320086383|emb|CBY96156.1| Flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
 gi|321223795|gb|EFX48858.1| Flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|322714164|gb|EFZ05735.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
 gi|323129447|gb|ADX16877.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|326623708|gb|EGE30053.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
 gi|326628165|gb|EGE34508.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
 gi|332988068|gb|AEF07051.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhimurium str. UK-1]
          Length = 403

 Score = 74.5 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 71/195 (36%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SF+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   SFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ +LV+  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGMQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q+                K   T  +     S   V  +      +  
Sbjct: 117 TGYPATGTPPTIQQGANPAPITIPNTLMAAKSTTTASMQINLNSTDPVPSKTPFSVSDAD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 177 SYNKKGTVTVYDSQG 191



 Score = 73.7 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 15/147 (10%), Positives = 45/147 (30%), Gaps = 5/147 (3%)

Query: 98  IILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157
              T    F  +   +  + +      +       +  +            +++ +V+  
Sbjct: 255 TAATFSLSFLNSMQQNTGANNIVATNQNGYKPGDLVSYQINNDGTVVGNYSNEQEQVLGQ 314

Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQ 212
           + L +   ++G   + ++  +                +   +  G LE SN +   E+  
Sbjct: 315 IVLANFANNEGLASQGDNVWAATQASGVALLGTAGSGNFGKLTNGALEASNVDLSKELVN 374

Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIR 239
           MI   + + S    I   ++ +   + 
Sbjct: 375 MIVAQRNYQSNAQTIKTQDQILNTLVN 401


>gi|56413836|ref|YP_150911.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197362759|ref|YP_002142396.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|56128093|gb|AAV77599.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197094236|emb|CAR59741.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
          Length = 403

 Score = 74.5 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 71/195 (36%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SF+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   SFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ +LV+  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGMQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q+                K   T  +     S   V  +      +  
Sbjct: 117 TGYPATGTPPTIQQGANPAPITIPNTLMAAKSTTTASMQINLNSTDPVPSKTPFSVSDAD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 177 SYNKKGTVTVYDSQG 191



 Score = 73.7 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 15/147 (10%), Positives = 45/147 (30%), Gaps = 5/147 (3%)

Query: 98  IILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157
              T    F  +   +  + +      +       +  +            +++ +V+  
Sbjct: 255 TAATFSLSFLNSMQQNTGANNIVATNQNGYKPGDLVSYQINNDGTVVGNYSNEQEQVLGQ 314

Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQ 212
           + L +   ++G   + ++  +                +   +  G LE SN +   E+  
Sbjct: 315 IVLANFANNEGLASQGDNVWAATQASGAALLGTAGSGNFGKLTNGALEASNVDLSKELVN 374

Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIR 239
           MI   + + S    I   ++ +   + 
Sbjct: 375 MIVAQRNYQSNAQTIKTQDQILNTLVN 401


>gi|170694392|ref|ZP_02885546.1| protein of unknown function DUF1078 domain protein [Burkholderia
           graminis C4D1M]
 gi|170140815|gb|EDT08989.1| protein of unknown function DUF1078 domain protein [Burkholderia
           graminis C4D1M]
          Length = 502

 Score = 74.5 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 68/177 (38%), Gaps = 2/177 (1%)

Query: 19  LSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--IDQKISFVASGKEYLSKEVGSFIST 76
           L  + +N++N +TVGF++   +F+++          +Q        +       G+  ST
Sbjct: 17  LDVIGNNIANANTVGFKSGAAQFADMYANSVATAVGNQIGIGTKLSEVQQQFSQGTITST 76

Query: 77  GTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQK 136
              LD A+ G+ +F L +   ++ +R+G F++  +G + +A G   +   A+    I   
Sbjct: 77  NQALDVAINGNGFFQLSNNGSLVYSRNGVFQLDKNGFITNAQGLQLMGYAANSTGVINTA 136

Query: 137 DEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT 193
             +        I+ K       GL         +   +   +     T     + +T
Sbjct: 137 QTVPLSVPTANIAPKATTNIAAGLNLNAQDPLMLGTPSVTAATTNAGTLTTPGATIT 193



 Score = 66.4 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 14/125 (11%), Positives = 35/125 (28%), Gaps = 5/125 (4%)

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                D  +                    +Q+   +  + L +     G V   N+    
Sbjct: 377 NSLQPDGYAAGTLTSFTIGADGTLTGNYSNQQTAALGQIVLANFSNQNGLVNLGNNEFQQ 436

Query: 180 NIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
                  +  +  +     ++ G +E+SN +   E+  +I   + + +    I   +   
Sbjct: 437 TSQSGVAQISAPGSTNHGVLQGGAVENSNVDLTSELVDLITAQRNYQANAQTIKTQQTVD 496

Query: 235 LEAIR 239
              I 
Sbjct: 497 QTLIN 501


>gi|27380965|ref|NP_772494.1| hypothetical protein bll5854 [Bradyrhizobium japonicum USDA 110]
 gi|27354131|dbj|BAC51119.1| bll5854 [Bradyrhizobium japonicum USDA 110]
          Length = 754

 Score = 74.5 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 63/172 (36%), Gaps = 11/172 (6%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           + N  +    A    L  ++ N++N+ T G++ I   F +++        Q    V +  
Sbjct: 6   AMNTSVGGLQAQSYALQNISGNIANSSTTGYKGIGTSFVDLIPDASVPSKQVAGGVTANA 65

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFAL-----------ESPRGIILTRDGRFKVTDDG 112
           +      G+  S+    + A+ GD +F++           +       TR G F++  +G
Sbjct: 66  KATITTQGTISSSSVATNMAITGDGFFSIQKATSVVDNLPQFGGVTYYTRRGDFQLNSNG 125

Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
           +LV+ +G Y +          PQ +    +  +          +     ++ 
Sbjct: 126 NLVNGAGYYLMGVTVDPKTGNPQGNVATVLKFQNNFIPAQATTSIQYAANLP 177



 Score = 69.9 bits (169), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 14/88 (15%), Positives = 33/88 (37%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMI 214
           +A + L   + +      +    +      P  D +  T+    LE SN +   E  ++I
Sbjct: 667 LAQVSLSHFNGTNYLKALDGGAYAATEQSGPAIDGASGTISGSSLEGSNTDIADEFTKLI 726

Query: 215 HLTQKFNSITTLIDENEKSMLEAIRNIA 242
              Q +++ T +I      + + +  + 
Sbjct: 727 VTQQAYSANTKVITTANSMVQDLLNVLR 754


>gi|238788315|ref|ZP_04632109.1| Flagellar hook protein FlgE [Yersinia frederiksenii ATCC 33641]
 gi|238723561|gb|EEQ15207.1| Flagellar hook protein FlgE [Yersinia frederiksenii ATCC 33641]
          Length = 428

 Score = 74.5 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 68/192 (35%), Gaps = 11/192 (5%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
            F+  ++   A    L  + +N++N+ T GF+   V F+++         Q    V    
Sbjct: 2   GFSQAVSGLNAASSNLDVIGNNIANSATSGFKAGSVSFADMFA-----GSQTGMGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASGKYP 122
                  G+  +T   LD A+    +F ++   G +   R+G+FK+ ++ ++V+  G   
Sbjct: 57  ITQDFNDGTPTTTNRRLDLAISQSGFFRMQDSSGGVYFARNGQFKLDENRNIVNMQGLSL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+          +        +S    +IA     S +M        +   +   P
Sbjct: 117 TGYPATGTPP-----TVQQGANPVPLSIPQDMIAAKATESGNMVANLTSTHDVISATFDP 171

Query: 183 PTPLEDLSGVTV 194
             P        +
Sbjct: 172 EKPDTYSFVNNM 183



 Score = 71.4 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 20/220 (9%), Positives = 54/220 (24%), Gaps = 7/220 (3%)

Query: 27  SNTDT--VGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFAL 84
           +N +T  V  +      ++             S   +     +  + +  + G       
Sbjct: 207 ANGNTWAVYTKDSSATLADATKPFDPTDPAAASLRGTMVFDTNGALKTVANGGGAASATN 266

Query: 85  EGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE 144
                           T       +   +  +           +       +        
Sbjct: 267 FNMTIPMGVVNGAPAQTFALNVAGSKQQNTGTDGIVTQNQTGYAAGEFTGFQINNDGSVV 326

Query: 145 KGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFL 199
               +Q+ +++  + L +    +G     ++                      T+  G L
Sbjct: 327 GTYSNQQTQLLGQIVLVNFSNPEGLSPEGDNVWKETKSSGNPILGTAGGGGFGTLTSGAL 386

Query: 200 EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           E SN +   E+  MI   + + S    I   ++ +   + 
Sbjct: 387 ESSNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILQTLVN 426


>gi|330501137|ref|YP_004378006.1| flagellar basal body FlaE domain-containing protein [Pseudomonas
           mendocina NK-01]
 gi|328915423|gb|AEB56254.1| flagellar basal body FlaE domain-containing protein [Pseudomonas
           mendocina NK-01]
          Length = 395

 Score = 74.5 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 58/132 (43%), Gaps = 6/132 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SFNI +    A+ ++L+T++ N++N  T GF++ + +F  +         Q +       
Sbjct: 2   SFNIAMTGLSAVNEQLNTISHNIANAGTTGFKSSRTEFGSIYAD-----SQAMGVEVLAT 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122
                + GS ++TG  LD A+ G  +F        +  TR G F    D ++V+A+G+  
Sbjct: 57  TQSISQGGSLVTTGRSLDLAISGGGFFVTRGGNGDVSYTRAGVFGADKDNNIVNAAGQTL 116

Query: 123 VLDMASVPIQIP 134
                     + 
Sbjct: 117 QGYPVDAAGNLQ 128



 Score = 62.2 bits (149), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 9/99 (9%), Positives = 31/99 (31%), Gaps = 5/99 (5%)

Query: 142 VGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP-----LEDLSGVTVKR 196
           +      + +  +   + L +   + G      +                       +  
Sbjct: 291 MVYANYSNGQRMLQGQVALATFANAGGLKDVSGTAWVETADSGAALIGVPGVGPFGALVA 350

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
           G LE+SN +   ++  ++   + + + T ++  N++   
Sbjct: 351 GSLENSNVDLTQQLVGLMEGQRNYQANTKVLTTNKELTQ 389


>gi|238799107|ref|ZP_04642563.1| Flagellar hook protein FlgE [Yersinia mollaretii ATCC 43969]
 gi|238717054|gb|EEQ08914.1| Flagellar hook protein FlgE [Yersinia mollaretii ATCC 43969]
          Length = 420

 Score = 74.5 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 56/134 (41%), Gaps = 6/134 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
            F+  ++   A    L  + +N++N+ T GF+   V F+++         Q    V    
Sbjct: 2   GFSQAVSGLNAASSNLDVIGNNIANSATSGFKAGSVSFADMFA-----GSQTGMGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +T   LD A+  + +F ++    GI   R+G+FK+  D ++V+  G   
Sbjct: 57  ITQDFNDGTATTTNRRLDLAISQNGFFRMQDSSGGIFYARNGQFKLDADRNIVNMQGLSL 116

Query: 123 VLDMASVPIQIPQK 136
               A+      Q+
Sbjct: 117 TGYPATGTPPTIQQ 130



 Score = 67.2 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 12/98 (12%), Positives = 32/98 (32%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLED 201
             + + +++  + + +    +G     ++                      T+  G LE 
Sbjct: 321 YSNSQTQLLGQIVMANFANPEGLSSEGDNVWKETRASGNPMLGTAGGGGFGTLTSGALES 380

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E+  MI   + + S    I   ++ +   + 
Sbjct: 381 SNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILQTLVN 418


>gi|146311246|ref|YP_001176320.1| flagellar hook protein FlgE [Enterobacter sp. 638]
 gi|145318122|gb|ABP60269.1| flagellar basal body FlaE domain protein [Enterobacter sp. 638]
          Length = 404

 Score = 74.5 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 68/192 (35%), Gaps = 6/192 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKIGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F + ++   +  +R+G+FK+ ++ ++V+  G   
Sbjct: 57  ITQDFNDGTTTNTGRGLDVAISQNGFFRMVDANGSVFYSRNGQFKLDENRNIVNMQGLQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
                +      Q                 K   T        S      +   ++    
Sbjct: 117 TGYPVAGTPPTIQTGANPQAITIPNTLMAAKSTTTASQQINLNSTDAAPSKAFNVADTSD 176

Query: 183 PTPLEDLSGVTV 194
           P        VTV
Sbjct: 177 PDSYNKKGTVTV 188



 Score = 73.7 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 16/150 (10%), Positives = 46/150 (30%), Gaps = 5/150 (3%)

Query: 95  PRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV 154
           P     T    F  +   +  + +      +       +  +            +++ +V
Sbjct: 253 PGATPATFALSFANSMQQNTGANNIVATNQNGYKPGDLVSYQINDNGTVVGNYSNEQNQV 312

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLEDSNANSMYE 209
           +  + L +   ++G     ++  +                +  ++  G LE SN +   E
Sbjct: 313 LGQIVLANFANNEGLKSEGDNVWTATQSSGVALLGTAGTGNFGSLTNGALEASNVDLSKE 372

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +  MI   + + S    I   ++ +   + 
Sbjct: 373 LVNMIVAQRNYQSNAQTIKTQDQILNTLVN 402


>gi|90418365|ref|ZP_01226277.1| putative flagellar hook protein FlgE [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90338037|gb|EAS51688.1| putative flagellar hook protein FlgE [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 388

 Score = 74.5 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 2/101 (1%)

Query: 7   IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66
             ++   A   RLSTV++N++N+ T G++    +F+ +V A +   +     V +     
Sbjct: 9   TSVSGMNAQANRLSTVSENIANSSTNGYKRNSTEFASLVLA-QGGGEYNPGSVKTQVRQS 67

Query: 67  SKEVGSFISTGTELDFALEGDAWF-ALESPRGIILTRDGRF 106
             + GS  +T +  D A++GD +F   ++      TR G F
Sbjct: 68  ISQQGSIAATSSGSDLAIQGDGFFVVQDTAGREFYTRAGSF 108



 Score = 69.9 bits (169), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 17/210 (8%), Positives = 44/210 (20%), Gaps = 5/210 (2%)

Query: 35  RTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES 94
           +   +   + +G             A+       + G   +T    D             
Sbjct: 176 KKSSMVVYDSIGKAIEVPVDMEKTAANTWTVSYTDSGGPQTTTIVFDPNTGRPTAAPANM 235

Query: 95  PRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV 154
               +       +        +      V +                       + +   
Sbjct: 236 TYTHVNGDTVDIEFGSLTEYATDFSSKLVTNGNPPGSFTGFAFAENGTLSGVMNTGQLIP 295

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYE 209
           +  M L              +  S              T     +    LE SN +   E
Sbjct: 296 LYEMSLARFASPDQLQASAGNVYSATASSGVAALGGPGTNGYGSLVSSGLEQSNVDLASE 355

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +  MI   + +++ + +     + +   + 
Sbjct: 356 LTSMIESQRSYSANSKVFQTGAEILDVLVN 385


>gi|212637785|ref|YP_002314310.1| flagellar hook protein FlgE [Shewanella piezotolerans WP3]
 gi|212559269|gb|ACJ31723.1| Flagellar basal body rod protein FlaE [Shewanella piezotolerans
           WP3]
          Length = 402

 Score = 74.5 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/210 (12%), Positives = 57/210 (27%), Gaps = 10/210 (4%)

Query: 42  SEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL- 100
              +             V    + +     +      + D  L G     L      I+ 
Sbjct: 193 EHALTQYYVKTADNTWSVHYMMDDVDVTPAAGHQLTFDSDGMLTGGDSLTLNINDPAIIG 252

Query: 101 ---TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI-A 156
              T +            S      +        ++       +    G  +   + +  
Sbjct: 253 GASTLNLALGYDKSTQYASDYNNSSLNQNGYTSGELNGIRLDESGMLYGTYTNGQEQLQG 312

Query: 157 TMGLYSVDMSQGFVRRENSGI-SPNIPPTP----LEDLSGVTVKRGFLEDSNANSMYEMG 211
            + L   +   G +   N+   + N    P        +  +V  G+LE SN ++  EM 
Sbjct: 313 QVVLADFNNPNGLIPVSNNAWTATNAAGQPIVGTPTTGTLGSVASGYLEGSNVDTTAEMV 372

Query: 212 QMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
            ++   + + S   ++D N       +  I
Sbjct: 373 SLMTAQRNYQSNAKVLDANSTMQQALLNAI 402



 Score = 74.1 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/144 (25%), Positives = 60/144 (41%), Gaps = 6/144 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SFNI L+   A  Q L+T+++N++N+ TVGFR+ + +FS +      +  Q         
Sbjct: 2   SFNIALSGLQATTQDLNTISNNIANSSTVGFRSGRSEFSAIY-----NGGQAGGVNVMST 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  GS + TG +LD  ++GD +F         +  R G F    DG +   +G   
Sbjct: 57  SQNFSMGGSLVYTGRQLDMGIQGDGFFVLSSQDGNTMYARAGMFNQDADGFVTDPAGNRL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKG 146
                S    +   +      + G
Sbjct: 117 QGYSVSGTGNLQTGNVTDLQVQAG 140


>gi|295097203|emb|CBK86293.1| fagellar hook-basal body proteins [Enterobacter cloacae subsp.
           cloacae NCTC 9394]
          Length = 404

 Score = 74.5 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 59/157 (37%), Gaps = 7/157 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SF+ GL+   A  + L  V +N++N+ T GF+   V F+++              V    
Sbjct: 2   SFSQGLSGLNAAAKALDVVGNNIANSQTAGFKAGSVAFADIFA------GTTGLGVQVAG 55

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
              +   G   +  + LD  L+G  +F +      +   R+G+FK   +G++++++    
Sbjct: 56  VTQNFGDGGLTAGNSSLDMGLQGKGFFRMVSEGGAVYYGRNGQFKQDQNGNIINSTNGLY 115

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG 159
           +    +                +          +T G
Sbjct: 116 LTGYQATGTPPTIAPGAPVGPIRIPTEDMPPAASTAG 152



 Score = 73.7 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 37/141 (26%), Gaps = 9/141 (6%)

Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
                    SLV                 I    E+      G+       +A + L   
Sbjct: 266 SSLTRRATDSLVKVDTIDGQAPGKYQSFVIGDSGEVVATYSNGQRQ----TVAQIVLADF 321

Query: 164 DMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
             S G     N+  S                S  T+    LE SN +   EM  MI   +
Sbjct: 322 ANSGGLAAEGNNVWSETPQSGQPFLGTSGSGSFGTINGNMLEQSNVDLGQEMVNMIVYQR 381

Query: 219 KFNSITTLIDENEKSMLEAIR 239
            + S +  I    + +   + 
Sbjct: 382 NYQSNSQTIKTQSELLQTLVN 402


>gi|224825777|ref|ZP_03698881.1| flagellar basal body FlaE domain protein [Lutiella nitroferrum
           2002]
 gi|224602001|gb|EEG08180.1| flagellar basal body FlaE domain protein [Lutiella nitroferrum
           2002]
          Length = 399

 Score = 74.5 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 53/122 (43%), Gaps = 6/122 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           S  I L+   A+  +L ++++N++N+ T GF++ +  FS           Q      +  
Sbjct: 2   SLEIALSGINAVNSQLGSISNNIANSGTYGFKSSRANFSATYA-----GTQATGVEVASN 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122
                  G  ++TG  LD A++G  +F        +  TR G F    DG LV + G++ 
Sbjct: 57  TQSIGRSGGTVTTGRALDAAIQGRGFFVTRDNAGSVAYTRVGIFNTDKDGVLVDSFGRHV 116

Query: 123 VL 124
             
Sbjct: 117 QG 118



 Score = 69.5 bits (168), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 14/100 (14%), Positives = 36/100 (36%), Gaps = 5/100 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGI-----SPNIPPTPLEDLSGVTVKRGFLED 201
             + + + + T+ L +     G V    +       S     +        T+  G LE 
Sbjct: 300 YSNGQKQAVGTIALANFPNEDGLVPVSATSWVDSPASGTALLSAPGSGLAGTLSAGSLEQ 359

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           SN +   E+  ++   + + + T +I    + +   ++ +
Sbjct: 360 SNVDMTAELVNLMSAQRNYQANTKVISTEGQVIQALMQAV 399


>gi|170748125|ref|YP_001754385.1| flagellar hook protein FlgE [Methylobacterium radiotolerans JCM
           2831]
 gi|170654647|gb|ACB23702.1| flagellar basal body FlaE domain protein [Methylobacterium
           radiotolerans JCM 2831]
          Length = 407

 Score = 74.5 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/122 (27%), Positives = 56/122 (45%), Gaps = 3/122 (2%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
            + G++   A   RL TVADN+ N +T G++    +FS ++           S V +   
Sbjct: 7   LHAGVSGMNAQSNRLGTVADNIQNQNTTGYKRASTEFSSLLIDPSPGSYDAGS-VDTVVR 65

Query: 65  YLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVT-DDGSLVSASGKYP 122
           +   E G+  +T +  D  ++G+ +F ++   G    TR G F V    G LV+A+G   
Sbjct: 66  HRISEEGTGTATNSPTDLTIKGNGFFVVKDGSGRSYLTRAGNFVVDGQTGDLVNAAGMRL 125

Query: 123 VL 124
             
Sbjct: 126 QG 127



 Score = 62.6 bits (150), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 22/212 (10%), Positives = 52/212 (24%), Gaps = 11/212 (5%)

Query: 34  FRTIKVKFSEVVGAIKNDIDQKISF-VASGKEYLSKEVGSFISTGTELDFALEGDAWFAL 92
           F+              N+  Q  ++  +    Y    +G   +        + G      
Sbjct: 198 FKADL-----YFAKTANNTWQVTAYDASLPGNYPGTPLGGPTTLTFNAFGQIAGAPKLNF 252

Query: 93  ESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG 152
             P G   T D             +  K   ++  +         +              
Sbjct: 253 TVPNGQPFTLDLSPLSQVADVAQVSDIKARSVNGNAASAVEGADIDTDGTVYAIYRDGSR 312

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSM 207
           +    + + SV        R  +    N    P +           ++   LE+S  +  
Sbjct: 313 RAAFRIPVASVGSPDNLTPRAGNVFDVNPESGPAQIGFANVGGRGHIQSKMLENSTVDLG 372

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            E+  MI     + + + +     + +   + 
Sbjct: 373 NELATMIEAQTTYGANSKVFQTGSEMLELLVN 404


>gi|327478809|gb|AEA82119.1| flagellar basal body FlaE domain-containing protein [Pseudomonas
           stutzeri DSM 4166]
          Length = 396

 Score = 74.5 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 41/202 (20%), Positives = 71/202 (35%), Gaps = 11/202 (5%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SFNI L    A+ ++L+T+ +N++N+ TVGF++ +  F  +         Q +     G 
Sbjct: 2   SFNIALTGLSAVNEQLNTIGNNIANSGTVGFKSSRTNFGSLYAET-----QAMGVEVIGT 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                + G+  ST   LD A+ G  +F    S   +  TR G F    D  + ++ G+  
Sbjct: 57  TQSISQGGALTSTNRTLDLAISGGGFFVTRASNGDVGYTRAGIFGTDKDSYITNSLGQRL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQK-----GKVIATMGLYSVDMSQGFVRRENSGI 177
               A     +            G I  +       V        V       +  +S  
Sbjct: 117 QGYPADATGNLQTGTVGDLQLRSGGIPARATDALSFVANLDANQEVPTVAFDPQAADSYN 176

Query: 178 SPNIPPTPLEDLSGVTVKRGFL 199
           S              T+ + F+
Sbjct: 177 STYTTKLYDSQGKEHTLTQYFV 198



 Score = 66.8 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 18/132 (13%), Positives = 46/132 (34%), Gaps = 9/132 (6%)

Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174
           V+ +            + + +  +++     GE   +G+V+    L S   ++G      
Sbjct: 269 VTNNRATGYAAGEQTGMSVEKDGKVYATYSNGERMLQGQVV----LASFVNAEGLKNISG 324

Query: 175 SGISPNIPPTPLEDLS-----GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           +  +           +       T+  G LE SN +   ++  ++   + + + T +I  
Sbjct: 325 TAWTETAASGAAMLGAPGVGQYGTLASGALESSNVDLTQQLVGLMEGQRNYQANTQVIST 384

Query: 230 NEKSMLEAIRNI 241
           N++        I
Sbjct: 385 NKELTQVLFNAI 396


>gi|157146226|ref|YP_001453545.1| flagellar hook protein FlgE [Citrobacter koseri ATCC BAA-895]
 gi|157083431|gb|ABV13109.1| hypothetical protein CKO_01983 [Citrobacter koseri ATCC BAA-895]
          Length = 401

 Score = 74.5 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 71/195 (36%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ +LV+  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q+                K   T  +     S   +  +      +  
Sbjct: 117 TGYPATGTPPTIQQGANPGPITIPNTLMAAKATTTASMQINLNSSDELPSKTPFDPSDAD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 177 SYNKKGTVTVFDSQG 191



 Score = 74.1 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 13/122 (10%), Positives = 39/122 (31%), Gaps = 5/122 (4%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             +       +  +            +++ +V+  + L +   ++G   + ++  +    
Sbjct: 278 NQNGYKPGDLVSYQINDDGTVVGNYSNEQTQVLGQIVLANFANNEGLASQGDNVWAATQA 337

Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                       +   +  G LE SN +   E+  MI   + + S    I   ++ +   
Sbjct: 338 SGVALLGTAGTGNFGKLTNGALESSNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397

Query: 238 IR 239
           + 
Sbjct: 398 VN 399


>gi|89056664|ref|YP_512115.1| hypothetical protein Jann_4173 [Jannaschia sp. CCS1]
 gi|88866213|gb|ABD57090.1| flagellar hook protein FlgE putative [Jannaschia sp. CCS1]
          Length = 452

 Score = 74.5 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 17/123 (13%), Positives = 41/123 (33%), Gaps = 5/123 (4%)

Query: 125 DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP- 183
           D + V   +  + +     +        + +  + L  +    G +  +N   + +    
Sbjct: 330 DGSPVGNLVSVEVDPNGFVKANFDVGITRTVYQIPLIDLPNPNGLIAEDNQLYTTSAESG 389

Query: 184 ----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
                   D     V    LE+S  +   E+ Q+I   + ++S   +I   ++ + E   
Sbjct: 390 SFFLWDAGDGPTGDVVAFALEESTTDVAAELTQLIQTQRAYSSNAKIIQTVDEMLQETTN 449

Query: 240 NIA 242
            I 
Sbjct: 450 IIR 452



 Score = 73.0 bits (177), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 34/146 (23%), Positives = 56/146 (38%), Gaps = 11/146 (7%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
           +S N G+A       RL+T+ADN++N+ T G++     FS +V             V   
Sbjct: 18  SSLNAGVAGLSVNASRLATIADNIANSGTNGYKRATADFSSMVIDQGGGTYSAG-GVRVT 76

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALES----------PRGIILTRDGRFKVTDDG 112
              L  + G+  +T    D A+ G  +  +               + L   G F+   DG
Sbjct: 77  TGRLIDQSGALATTNNGTDLAVRGRGFLPVTRSSAVNAAAGAELPLYLATTGSFRTDADG 136

Query: 113 SLVSASGKYPVLDMASVPIQIPQKDE 138
            LV++SG   +   A     +P    
Sbjct: 137 YLVTSSGVTLMGWPADADGNVPSFPR 162


>gi|120597305|ref|YP_961879.1| flagellar hook protein FlgE [Shewanella sp. W3-18-1]
 gi|120557398|gb|ABM23325.1| flagellar basal body FlaE domain protein [Shewanella sp. W3-18-1]
          Length = 395

 Score = 74.1 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/133 (25%), Positives = 58/133 (43%), Gaps = 6/133 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SFNI L+   A  Q L+T+++N++N  T GFR  + +F+ +      +  Q         
Sbjct: 2   SFNIALSGLQATTQDLNTISNNIANASTNGFRGGRSEFASIY-----NGGQAGGVSVMST 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                + GS   TG +LD  ++G+ +F L+ +  G +  R G F     G +    G   
Sbjct: 57  TQNFSKGGSLTYTGRQLDMGIQGEGFFVLKGTDGGAMYARAGMFHKDSQGFITDPVGSRL 116

Query: 123 VLDMASVPIQIPQ 135
                +   +I Q
Sbjct: 117 QGYSVNATGKIQQ 129



 Score = 65.3 bits (157), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 17/142 (11%), Positives = 38/142 (26%), Gaps = 6/142 (4%)

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI-ATMGLYSVD 164
                     +      +        ++       N    G  +   + +   + L +  
Sbjct: 254 INFDKSTQYAAKYNNSSLSQDGYTSGELKGVRLDDNGMLYGTYTNGQEQLQGQVILANFS 313

Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVTVKRG-----FLEDSNANSMYEMGQMIHLTQK 219
              G     N+              +  T   G     +LE SN ++  EM  ++   + 
Sbjct: 314 NPNGLSAVSNNAWVATNTAGQAITGAPSTGTMGTVTGGYLEGSNVDTTAEMVNLMSAQRN 373

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           + S   ++D N       +  I
Sbjct: 374 YQSNAKVLDVNSTMQQALLNAI 395


>gi|146294550|ref|YP_001184974.1| flagellar hook protein FlgE [Shewanella putrefaciens CN-32]
 gi|145566240|gb|ABP77175.1| flagellar basal body FlaE domain protein [Shewanella putrefaciens
           CN-32]
          Length = 395

 Score = 74.1 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/133 (25%), Positives = 58/133 (43%), Gaps = 6/133 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SFNI L+   A  Q L+T+++N++N  T GFR  + +F+ +      +  Q         
Sbjct: 2   SFNIALSGLQATTQDLNTISNNIANASTNGFRGGRSEFASIY-----NGGQAGGVSVMST 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                + GS   TG +LD  ++G+ +F L+ +  G +  R G F     G +    G   
Sbjct: 57  TQNFSKGGSLTYTGRQLDMGIQGEGFFVLKGTDGGAMYARAGMFHKDSQGFITDPVGSRL 116

Query: 123 VLDMASVPIQIPQ 135
                +   +I Q
Sbjct: 117 QGYSVNATGKIQQ 129



 Score = 65.3 bits (157), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 17/142 (11%), Positives = 38/142 (26%), Gaps = 6/142 (4%)

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI-ATMGLYSVD 164
                     +      +        ++       N    G  +   + +   + L +  
Sbjct: 254 INFDKSTQYAAKYNNSSLSQDGYTSGELKGVRLDDNGMLYGTYTNGQEQLQGQVILANFS 313

Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVTVKRG-----FLEDSNANSMYEMGQMIHLTQK 219
              G     N+              +  T   G     +LE SN ++  EM  ++   + 
Sbjct: 314 NPNGLSAVSNNAWVATNTAGQAITGAPSTGTMGTVTGGYLEGSNVDTTAEMVNLMSAQRN 373

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           + S   ++D N       +  I
Sbjct: 374 YQSNAKVLDVNSTMQQALLNAI 395


>gi|312164118|gb|ADQ38281.1| flagellar hook protein [Azospirillum brasilense]
          Length = 291

 Score = 74.1 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 59/135 (43%), Gaps = 16/135 (11%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
           FN G+    A  + L T+++N++N  T GF+  + +FS+ V + +       + V + + 
Sbjct: 7   FNNGVLGLTAQNRALGTISNNIANASTSGFKASETQFSDFVLSDRTGNKDPGNGVRAFE- 65

Query: 65  YLSKEVGSFISTGTELDFALEGDAWFALES---------------PRGIILTRDGRFKVT 109
            L    G+   T    + A+ G+ +F ++                   + LTR G F   
Sbjct: 66  RLDHSGGTVTRTDITTNAAINGNGFFIVQDLAAQAGTTATTAQTSDDSVFLTRSGDFSPD 125

Query: 110 DDGSLVSASGKYPVL 124
            +G LV+ +GK  + 
Sbjct: 126 KEGRLVNGAGKALMG 140


>gi|293408367|ref|ZP_06652206.1| conserved hypothetical protein [Escherichia coli B354]
 gi|291471545|gb|EFF14028.1| conserved hypothetical protein [Escherichia coli B354]
          Length = 400

 Score = 74.1 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 40/187 (21%), Positives = 68/187 (36%), Gaps = 6/187 (3%)

Query: 7   IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66
           I      A+ ++L  +++N++N  TVG++++  +FS +         Q +    +G    
Sbjct: 5   IAATGLNAVNEQLDGISNNIANAGTVGYKSMTTQFSAMYA-----GSQAMGVSVAGTAQS 59

Query: 67  SKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125
               GS +STG  LD A+  D +F   +S   I  TR G F+   +G +V+ASG Y    
Sbjct: 60  ISRGGSLVSTGNALDLAINNDGFFVTCDSAGNISYTRAGSFETDKNGYIVNASGAYLQGY 119

Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185
                  +          + G I  +     T             R        N     
Sbjct: 120 PVDDSGTLQTGTVTDIQIKTGNIPAQASSSLTFTANFDASDDAIDRTTVPFDPTNSSSYT 179

Query: 186 LEDLSGV 192
               + V
Sbjct: 180 DSYTTTV 186



 Score = 68.7 bits (166), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 55/194 (28%), Gaps = 10/194 (5%)

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113
           Q            +  +    +TG            F  ++   I LT D          
Sbjct: 211 QYTFDGQQQTGVPATTLTFDPNTGKLTSPTTPQTIEFQTDAAAPIDLTVDYSTCTQYGSD 270

Query: 114 L-VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172
             V+ +            +Q+    +++     GE   +G+V+    L +     G    
Sbjct: 271 FSVTTNSANGYASATQNGVQVDDDGKVYATYSNGERMLQGQVV----LATFPNENGLEAV 326

Query: 173 ENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
             +                      T+  G LE SN +   E+  ++   + + + T +I
Sbjct: 327 SGTAWVQTGESGTPLIGVPGSGTCGTLTSGVLESSNVDITSELVNLMTAQRNYQANTKVI 386

Query: 228 DENEKSMLEAIRNI 241
             + +      + +
Sbjct: 387 ATSTQLDDALFQAM 400


>gi|89072315|ref|ZP_01158894.1| flagellar hook protein [Photobacterium sp. SKA34]
 gi|89051847|gb|EAR57299.1| flagellar hook protein [Photobacterium sp. SKA34]
          Length = 398

 Score = 74.1 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/132 (25%), Positives = 56/132 (42%), Gaps = 6/132 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SF+I L+   A   +L+T+++N++N  T GF+  + +FS V      +  Q      +  
Sbjct: 2   SFDIALSGLDATNIQLNTISNNIANVSTSGFKESRTEFSAVY-----NGMQAGGVEVAAI 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASGKYP 122
                + GS   TG  LD A+ G  +F  +      + TR G F    D ++VS +G   
Sbjct: 57  SQNFDKTGSITGTGRPLDLAISGSGFFVTKDLTGQTLYTRSGVFGSDKDNNIVSNNGAKL 116

Query: 123 VLDMASVPIQIP 134
                     + 
Sbjct: 117 QGYTVDANNNLQ 128



 Score = 74.1 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 13/100 (13%), Positives = 34/100 (34%), Gaps = 5/100 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLED 201
             + + ++   + L      QG V+   +    +       + +  T     +  G LE 
Sbjct: 299 YTNGQSQLQGQVMLADFANPQGLVKTNGTSWIQSFSSGAPVNGAPSTGTLGGLVAGALEG 358

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           SN +   E+  ++   + + +    I  ++K        +
Sbjct: 359 SNVDLTSELVSLMTAQRNYQANAKTISTSDKLTQSLFNAV 398


>gi|157781876|gb|ABV72264.1| FlgE [Azospirillum brasilense]
          Length = 297

 Score = 74.1 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 59/135 (43%), Gaps = 16/135 (11%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
           FN G+    A  + L T+++N++N  T GF+  + +FS+ V + +       + V + + 
Sbjct: 7   FNNGVLGLTAQNRALGTISNNIANASTSGFKASETQFSDFVLSDRTGNKDPGNGVRAFE- 65

Query: 65  YLSKEVGSFISTGTELDFALEGDAWFALES---------------PRGIILTRDGRFKVT 109
            L    G+   T    + A+ G+ +F ++                   + LTR G F   
Sbjct: 66  RLDHSGGTVTRTDITTNAAINGNGFFIVQDLAAQAGTTATTAQTSDDSVFLTRSGDFSPD 125

Query: 110 DDGSLVSASGKYPVL 124
            +G LV+ +GK  + 
Sbjct: 126 KEGRLVNGAGKALMG 140


>gi|296445196|ref|ZP_06887156.1| fagellar hook-basal body protein [Methylosinus trichosporium OB3b]
 gi|296257370|gb|EFH04437.1| fagellar hook-basal body protein [Methylosinus trichosporium OB3b]
          Length = 413

 Score = 74.1 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 2/121 (1%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
           FN  +    A    L  V+ N++N+ TVG++    +FS V+ +++N  D     V +   
Sbjct: 7   FNTSVMGMAAQASALGAVSQNIANSGTVGYKDATTQFSTVLSSVQNGSDPAG-GVTAQTG 65

Query: 65  YLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYPV 123
                 G+   T +  D A++G  +F +       +LTR G F+   +G LV+ +G Y +
Sbjct: 66  VAVTAQGNTQQTSSTTDLAIQGSGFFVVSDSSGNTLLTRAGSFEPDSEGRLVNKAGYYLM 125

Query: 124 L 124
            
Sbjct: 126 G 126



 Score = 59.1 bits (141), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 11/85 (12%), Positives = 28/85 (32%), Gaps = 6/85 (7%)

Query: 162 SVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHL 216
           +V    G      +  + N            T     ++   LE S  +   ++  MI  
Sbjct: 329 NVSSPSGLQSVSGNAFATNASSGTAYVGLPGTGSFGDIQSKSLESSTVDLATQLSNMIVA 388

Query: 217 TQKFNSITTLIDENEKSMLEAIRNI 241
            + + + + +     + M + + N+
Sbjct: 389 QRSYTANSQVFQVASEVM-QVLNNL 412


>gi|218703525|ref|YP_002411044.1| lateral flagellar hook FlgE-like protein [Escherichia coli UMN026]
 gi|293403355|ref|ZP_06647446.1| flgE [Escherichia coli FVEC1412]
 gi|300900359|ref|ZP_07118535.1| flagellar hook protein FlgE [Escherichia coli MS 198-1]
 gi|218430622|emb|CAR11488.1| Lateral flagellar hook protein (FlgE-like) [Escherichia coli
           UMN026]
 gi|291429208|gb|EFF02228.1| flgE [Escherichia coli FVEC1412]
 gi|300356127|gb|EFJ71997.1| flagellar hook protein FlgE [Escherichia coli MS 198-1]
          Length = 400

 Score = 74.1 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 40/187 (21%), Positives = 68/187 (36%), Gaps = 6/187 (3%)

Query: 7   IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66
           I      A+ ++L  +++N++N  TVG++++  +FS +         Q +    +G    
Sbjct: 5   IAATGLNAVNEQLDGISNNIANAGTVGYKSMTTQFSAMYA-----GSQAMGVSVAGTAQS 59

Query: 67  SKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125
               GS +STG  LD A+  D +F   +S   I  TR G F+   +G +V+ASG Y    
Sbjct: 60  ISRGGSLVSTGNALDLAINNDGFFVTCDSAGNISYTRAGSFETDKNGYIVNASGAYLQGY 119

Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185
                  +          + G I  +     T             R        N     
Sbjct: 120 PVDDTGTLQTGTVTDIQIKTGNIPAQASSSLTFTANFDASDDAIDRTTVPFDPTNSSSYT 179

Query: 186 LEDLSGV 192
               + V
Sbjct: 180 DSYTTTV 186



 Score = 68.4 bits (165), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 55/194 (28%), Gaps = 10/194 (5%)

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113
           Q            +  +    +TG            F  ++   I LT D          
Sbjct: 211 QYTFDGQQQTGVPATTLTFDPNTGKLTSLTTPQTIEFQTDAAAPIDLTVDYSTCTQYGSD 270

Query: 114 L-VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172
             V+ +            +Q+    +++     GE   +G+V+    L +     G    
Sbjct: 271 FSVTTNSANGYASATQNGVQVDDDGKVYATYSNGERMLQGQVV----LATFPNENGLEAV 326

Query: 173 ENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
             +                      T+  G LE SN +   E+  ++   + + + T +I
Sbjct: 327 SGTAWVQTGESGTPLIGVPGSGTCGTLTSGVLESSNVDITSELVNLMTAQRNYQANTKVI 386

Query: 228 DENEKSMLEAIRNI 241
             + +      + +
Sbjct: 387 ATSTQLDDALFQAM 400


>gi|260767923|ref|ZP_05876857.1| flagellar hook protein FlgE [Vibrio furnissii CIP 102972]
 gi|260615953|gb|EEX41138.1| flagellar hook protein FlgE [Vibrio furnissii CIP 102972]
          Length = 398

 Score = 74.1 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 6/131 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SFNI L+   A    L+T++ N++N  T GF+  + +FS V      +  Q      +  
Sbjct: 2   SFNIALSGLDATNTELNTISHNIANASTYGFKGARTEFSAVY-----NGMQPGGVEVASI 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122
                + GS   TG  +D A+ G  +F  +      + TR G F    D  +V  +G   
Sbjct: 57  SQNFDKNGSVTGTGRAMDLAINGSGFFVTKDSMGQTLYTRSGVFGTDKDNYVVGNTGAKL 116

Query: 123 VLDMASVPIQI 133
                     +
Sbjct: 117 QGYSVDGSNNL 127



 Score = 71.8 bits (174), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 19/134 (14%), Positives = 42/134 (31%), Gaps = 9/134 (6%)

Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172
             VS +            +++     ++     GE   +G+V+    L +    QG  + 
Sbjct: 269 FGVSTNNPNGYTSGELAGVRVEGNGMVYATYTNGESQLQGQVV----LANFANPQGLAKV 324

Query: 173 ENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
             +  + +            T     +  G LE SN +   E+  ++   + + +    I
Sbjct: 325 SGTAWTQSFSSGSPTVGVPGTGTLGDLTPGALEGSNVDLTSELVSLMTAQRNYQANAKTI 384

Query: 228 DENEKSMLEAIRNI 241
              +K        I
Sbjct: 385 STEDKLTQALFNAI 398


>gi|315179626|gb|ADT86540.1| flagellar hook protein E [Vibrio furnissii NCTC 11218]
          Length = 398

 Score = 74.1 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 6/131 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SFNI L+   A    L+T++ N++N  T GF+  + +FS V      +  Q      +  
Sbjct: 2   SFNIALSGLDATNTELNTISHNIANASTYGFKGARTEFSAVY-----NGMQPGGVEVASI 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122
                + GS   TG  +D A+ G  +F  +      + TR G F    D  +V  +G   
Sbjct: 57  SQNFDKNGSVTGTGRAMDLAINGSGFFVTKDSMGQTLYTRSGVFGTDKDNYVVGNTGAKL 116

Query: 123 VLDMASVPIQI 133
                     +
Sbjct: 117 QGYSVDGNNNL 127



 Score = 71.4 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 19/134 (14%), Positives = 42/134 (31%), Gaps = 9/134 (6%)

Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172
             VS +            +++     ++     GE   +G+V+    L +    QG  + 
Sbjct: 269 FGVSTNNPNGYTSGELAGVRVEGNGMVYATYTNGESQLQGQVV----LANFANPQGLAKV 324

Query: 173 ENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
             +  + +            T     +  G LE SN +   E+  ++   + + +    I
Sbjct: 325 SGTAWTQSFSSGSPTVGVPGTGTLGDLTPGALEGSNVDLTSELVSLMTAQRNYQANAKTI 384

Query: 228 DENEKSMLEAIRNI 241
              +K        I
Sbjct: 385 STEDKLTQALFNAI 398


>gi|161614600|ref|YP_001588565.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Paratyphi B str. SPB7]
 gi|168237259|ref|ZP_02662317.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|168244776|ref|ZP_02669708.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|194449419|ref|YP_002045176.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194736988|ref|YP_002114176.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|161363964|gb|ABX67732.1| hypothetical protein SPAB_02350 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194407723|gb|ACF67942.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194712490|gb|ACF91711.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197289882|gb|EDY29243.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|205336442|gb|EDZ23206.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
          Length = 403

 Score = 74.1 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 71/195 (36%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SF+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   SFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ +LV+  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGMQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q+                K   T  +     S   V  +      +  
Sbjct: 117 TGYPATGTPPTIQQGANPAPITIPNTLMAAKSTTTASMQINLNSTDPVPSKTPFSVSDAD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 177 SYNKKGTVTVYDSQG 191



 Score = 73.4 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 15/147 (10%), Positives = 45/147 (30%), Gaps = 5/147 (3%)

Query: 98  IILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157
              T    F  +   +  + +      +       +  +            +++ +V+  
Sbjct: 255 TAATFSLSFLNSMQQNTGANNIVATNQNGYKPGDLVSYQINNDGTVVGNYSNEQEQVLGQ 314

Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQ 212
           + L +   ++G   + ++  +                +   +  G LE SN +   E+  
Sbjct: 315 IVLANFANNEGLASQGDNVWAATQASGVALLGTAGSGNFGKLTNGALEASNVDLSKELVN 374

Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIR 239
           MI   + + S    I   ++ +   + 
Sbjct: 375 MIVAQRNYQSNAQTIKTQDQILNTLVN 401


>gi|289679022|ref|ZP_06499912.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           syringae FF5]
          Length = 151

 Score = 74.1 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 53/147 (36%), Gaps = 3/147 (2%)

Query: 98  IILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157
              TR     +   G L   SG   + +   + +   Q+ EI   G     S        
Sbjct: 2   EAYTRSSGMNIDALGVLRDGSGLPVMGNGGPIAVPPQQQIEIGADGTISIRSLGESPQVM 61

Query: 158 MGLYS---VDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMI 214
             +     V      + +   G+       P +  + V V+ GFL+ SN N++ EM  ++
Sbjct: 62  AQVDRIKLVRPDLKTMEKGPDGLIHTKTGRPADADATVQVESGFLQASNVNAVEEMTSVL 121

Query: 215 HLTQKFNSITTLIDENEKSMLEAIRNI 241
            L+++F     ++   E+      R +
Sbjct: 122 ALSRQFELHVKMMKTAEEDDQSMARVL 148


>gi|167945456|ref|ZP_02532530.1| flagellar hook protein FlgE [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 175

 Score = 74.1 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 48/114 (42%), Gaps = 3/114 (2%)

Query: 17  QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID--QKISFVASGKEYLSKEVGSFI 74
             L    +N++N+ T GF+  + +F+++  +  +D         V + K        S  
Sbjct: 3   TDLEVTGNNIANSSTTGFKESRAEFADIFASSISDASNATSGQGVRTTKVAQQFRQDSIE 62

Query: 75  STGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLVSASGKYPVLDMA 127
            T   LD  + G+ +F +E P G    TR G F V  +G +V  +G    +   
Sbjct: 63  FTANNLDLGINGEGFFTMEQPNGDRSYTRAGAFNVDRNGYVVDHTGSRLQIFPP 116


>gi|195940721|ref|ZP_03086103.1| flagellar basal body rod protein FlgF [Escherichia coli O157:H7
           str. EC4024]
          Length = 186

 Score = 74.1 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/186 (20%), Positives = 65/186 (34%), Gaps = 13/186 (6%)

Query: 68  KEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASGKYPVLDM 126
              G    T   LD AL+ D W A+++  G    TR+G  +V+  G L      +PV+  
Sbjct: 1   MTPGQMDYTARPLDVALQQDGWLAVQTADGGEGYTRNGNIQVSATGQL--TIQGHPVMGE 58

Query: 127 ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENSGISP--- 179
           A         +              G    T+        V      V+R + G+     
Sbjct: 59  AGPLTVPEGSELTIAADGTISALNPGDPANTVAPVGRLKLVKAEGNEVQRGDDGMFRLTQ 118

Query: 180 ---NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                    L+    + V  G LE SN   +  M  MI   ++F     +I   +++  +
Sbjct: 119 AAQATRGATLQADPTIRVMSGVLEGSNVKPVEAMTDMIASARRFEMQMKIISSVDENASK 178

Query: 237 AIRNIA 242
           A + +A
Sbjct: 179 ANQLLA 184


>gi|1294806|gb|AAB06803.1| hook protein [Treponema denticola]
          Length = 184

 Score = 74.1 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 46/115 (40%), Gaps = 12/115 (10%)

Query: 25  NMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------------ISFVASGKEYLSKEVGS 72
           N++N +T GF+  +V F +++    +   +                +           G+
Sbjct: 1   NVANVNTTGFKRGRVNFQDLISQQLSGAARPTEELGGVNPKEVGLGMMVASIDTIFTQGA 60

Query: 73  FISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMA 127
             +TG   D A++G+ +F L+       TR G F +  +G+LV+ +    V    
Sbjct: 61  LQTTGVNTDLAIQGNGFFILKDGEKTFYTRAGAFGIDKEGTLVNPANGMRVQGWM 115


>gi|289679025|ref|ZP_06499915.1| flagellar hook protein FlgE [Pseudomonas syringae pv. syringae FF5]
          Length = 137

 Score = 74.1 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 40/129 (31%), Gaps = 5/129 (3%)

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
           ++S     +D  S       +     +   G  +   K I  + L S     G   R ++
Sbjct: 7   TSSRSAAYVDGHSAGELKSLEVGRDGILRAGFTNGMTKSIGQVMLASFANPHGLQPRSDT 66

Query: 176 GISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
             +        E       +  ++  G LE SN     E+  +I     + + +  I   
Sbjct: 67  RWTATADSGVAEYDVPGVGTLGSIVSGALEGSNVVLADELIALIQAQTAYQANSKAISTE 126

Query: 231 EKSMLEAIR 239
              M   I+
Sbjct: 127 VTLMQTLIQ 135


>gi|146278769|ref|YP_001168928.1| hypothetical protein Rsph17025_2736 [Rhodobacter sphaeroides ATCC
           17025]
 gi|145557010|gb|ABP71623.1| protein of unknown function DUF1078 domain protein [Rhodobacter
           sphaeroides ATCC 17025]
          Length = 474

 Score = 74.1 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 66/170 (38%), Gaps = 10/170 (5%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV-GAIKNDIDQKISFVAS 61
           +S N G+A   A   +L+++ADN++N+ T G++     F  +V     N        V +
Sbjct: 5   SSLNAGVAGLYANATKLASIADNIANSGTYGYKRADADFESMVITQSANSGTYSAGGVRA 64

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG---------IILTRDGRFKVTDDG 112
               L +E G+ +ST   +D A+ G     +              +++TR G FK   +G
Sbjct: 65  NTLRLVEERGAIVSTSNAMDIAISGRGMLPVVRETSLGSTTGNDALLMTRTGSFKTDPNG 124

Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162
            L + +G   +   A+    +P          +  +    +  A      
Sbjct: 125 VLKTDTGLVLLGWPANADGTVPTMSRDSISQLQPVVIAANQTAADPTTRM 174



 Score = 69.1 bits (167), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 15/98 (15%), Positives = 30/98 (30%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLED 201
             +   +VI  + L  V    G     N   + +            D     V     E 
Sbjct: 374 YDTGFTRVIYQIPLVDVPNYNGLTALNNQTFAISPDSGSFYLWDAGDGPTGDVVGYAREG 433

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           S  +   E+  +I   + ++S   +I   ++ + E   
Sbjct: 434 STTDVAQELTNLIQTQRAYSSNAKIIQTVDEMLQETTN 471


>gi|59889780|emb|CAH19136.1| Lateral flagellar hook protein (FlgE-like) [Escherichia coli]
 gi|284920044|emb|CBG33101.1| lateral flagellar hook protein (FlgE-like) [Escherichia coli 042]
          Length = 400

 Score = 74.1 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/146 (24%), Positives = 63/146 (43%), Gaps = 6/146 (4%)

Query: 7   IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66
           I      A+ ++L  +++N++N  TVG++++  +FS +         Q +    +G    
Sbjct: 5   IAATGLNAVNEQLDGISNNIANAGTVGYKSMTTQFSAMYA-----GSQAMGVSVAGTAQS 59

Query: 67  SKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125
               GS +STG  LD A+  D +F   +S   I  TR G F+   +G +V+ASG Y    
Sbjct: 60  ISRGGSLVSTGNALDLAINNDGFFVTCDSAGNISYTRAGSFETDKNGYIVNASGAYLQGY 119

Query: 126 MASVPIQIPQKDEIFNVGEKGEISQK 151
                  +          + G I  +
Sbjct: 120 PVDDSGTLQTGTVTDIQIKTGNIPAQ 145



 Score = 68.7 bits (166), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 55/194 (28%), Gaps = 10/194 (5%)

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113
           Q            +  +    +TG            F  ++   I LT D          
Sbjct: 211 QYTFDGQQQTGVPAMTLTFDPNTGKLTSPTTPQTIEFQTDAAAPIDLTVDYSTCTQYGSE 270

Query: 114 L-VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172
             V+ +            +Q+    +++     GE   +G+V+    L +     G    
Sbjct: 271 FSVTTNAANGYASATQNGVQVDDDGKVYATYSNGERMLQGQVV----LATFPNENGLEAV 326

Query: 173 ENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
             +                      T+  G LE SN +   E+  ++   + + + T +I
Sbjct: 327 SGTAWVQTGESGTPLIGVPGSGTCGTLSSGVLESSNVDITSELVNLMTAQRNYQANTKVI 386

Query: 228 DENEKSMLEAIRNI 241
             + +      + +
Sbjct: 387 ATSTQLDDALFQAM 400


>gi|262166282|ref|ZP_06034019.1| flagellar hook protein FlgE [Vibrio mimicus VM223]
 gi|262025998|gb|EEY44666.1| flagellar hook protein FlgE [Vibrio mimicus VM223]
          Length = 421

 Score = 74.1 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 67/196 (34%), Gaps = 13/196 (6%)

Query: 17  QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGKEYLSKEVGSFI 74
             L+T ++N++N +T GF+  + +F +V       N        V + K       GS I
Sbjct: 1   MDLNTTSNNIANANTFGFKESRAEFGDVYSTSLFTNAKTTPGQGVQAAKVAQQFHEGSSI 60

Query: 75  STGTELDFALEGDAWFALES----PRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVP 130
            T   LD  + G  +FA+      P+   LTR+G F +  +  +V+A+ ++ +    +  
Sbjct: 61  YTNNPLDLRIAGTGFFAVAKDKIVPQQNELTRNGAFHLDKNSYMVTANDEFLLGYEVNPD 120

Query: 131 IQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF-------VRRENSGISPNIPP 183
                  E   +    +  +  +        ++  +          +    +        
Sbjct: 121 SGDVLSYEPKPINIPPQFGKPKQTANIDLGANLPANGELKDPTLFDITDPETYNRTTSST 180

Query: 184 TPLEDLSGVTVKRGFL 199
                     +   +L
Sbjct: 181 IYDSMGQPYKLTTYYL 196



 Score = 65.7 bits (158), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 15/122 (12%), Positives = 37/122 (30%), Gaps = 5/122 (4%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI- 181
             D A+         +          + +   +  + L  V   QG  ++  +       
Sbjct: 298 DQDGATTGFLTKIDFDENGSVLATYSNGQNTTLGRVALVRVANEQGLDKKGGTQWDATQF 357

Query: 182 ----PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                       S  ++  G LE SN +   E+  +I   + F + +  ++ +       
Sbjct: 358 SGDKIWGESNKGSFGSISNGSLEQSNIDMTQELVDLISAQRNFQANSRALEVHNGLQQNI 417

Query: 238 IR 239
           ++
Sbjct: 418 LQ 419


>gi|22126389|ref|NP_669812.1| flagellar basal body rod protein FlgF [Yersinia pestis KIM 10]
 gi|45441408|ref|NP_992947.1| flagellar basal body rod protein FlgF [Yersinia pestis biovar
           Microtus str. 91001]
 gi|108807174|ref|YP_651090.1| flagellar basal body rod protein FlgF [Yersinia pestis Antiqua]
 gi|108812482|ref|YP_648249.1| flagellar basal body rod protein FlgF [Yersinia pestis Nepal516]
 gi|145598609|ref|YP_001162685.1| flagellar basal body rod protein FlgF [Yersinia pestis Pestoides F]
 gi|149366250|ref|ZP_01888285.1| flagellar basal-body rod protein FlgF [Yersinia pestis CA88-4125]
 gi|162420290|ref|YP_001606474.1| flagellar basal body rod protein FlgF [Yersinia pestis Angola]
 gi|165926032|ref|ZP_02221864.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165938686|ref|ZP_02227241.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166010809|ref|ZP_02231707.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166211025|ref|ZP_02237060.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167401087|ref|ZP_02306590.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167420459|ref|ZP_02312212.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167425815|ref|ZP_02317568.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167467492|ref|ZP_02332196.1| flagellar basal-body rod protein FlgF [Yersinia pestis FV-1]
 gi|218928923|ref|YP_002346798.1| flagellar basal body rod protein FlgF [Yersinia pestis CO92]
 gi|229896243|ref|ZP_04511413.1| Flagellar basal-body rod protein flgF [Yersinia pestis Pestoides A]
 gi|229897178|ref|ZP_04512334.1| Flagellar basal-body rod protein flgF [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229897904|ref|ZP_04513055.1| Flagellar basal-body rod protein flgF [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229902864|ref|ZP_04517981.1| Flagellar basal-body rod protein flgF [Yersinia pestis Nepal516]
 gi|270486644|ref|ZP_06203718.1| flagellar basal body rod protein FlgF [Yersinia pestis KIM D27]
 gi|294504029|ref|YP_003568091.1| flagellar basal-body rod protein FlgF [Yersinia pestis Z176003]
 gi|21959375|gb|AAM86063.1|AE013853_11 cell-proximal portion of basal-body rod protein [Yersinia pestis
           KIM 10]
 gi|45436268|gb|AAS61824.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
           Microtus str. 91001]
 gi|108776130|gb|ABG18649.1| flagellar basal-body rod protein FlgF [Yersinia pestis Nepal516]
 gi|108779087|gb|ABG13145.1| flagellar basal-body rod protein FlgF [Yersinia pestis Antiqua]
 gi|115347534|emb|CAL20443.1| flagellar basal-body rod protein FlgF [Yersinia pestis CO92]
 gi|145210305|gb|ABP39712.1| flagellar basal-body rod protein FlgF [Yersinia pestis Pestoides F]
 gi|149292663|gb|EDM42737.1| flagellar basal-body rod protein FlgF [Yersinia pestis CA88-4125]
 gi|162353105|gb|ABX87053.1| flagellar basal-body rod protein FlgF [Yersinia pestis Angola]
 gi|165913300|gb|EDR31922.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165922236|gb|EDR39413.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165990153|gb|EDR42454.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166208205|gb|EDR52685.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|166962154|gb|EDR58175.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167049476|gb|EDR60884.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167055214|gb|EDR65011.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|229680311|gb|EEO76410.1| Flagellar basal-body rod protein flgF [Yersinia pestis Nepal516]
 gi|229688945|gb|EEO81010.1| Flagellar basal-body rod protein flgF [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229693515|gb|EEO83564.1| Flagellar basal-body rod protein flgF [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229701166|gb|EEO89195.1| Flagellar basal-body rod protein flgF [Yersinia pestis Pestoides A]
 gi|262361785|gb|ACY58506.1| flagellar basal-body rod protein FlgF [Yersinia pestis D106004]
 gi|262366079|gb|ACY62636.1| flagellar basal-body rod protein FlgF [Yersinia pestis D182038]
 gi|270335148|gb|EFA45925.1| flagellar basal body rod protein FlgF [Yersinia pestis KIM D27]
 gi|294354488|gb|ADE64829.1| flagellar basal-body rod protein FlgF [Yersinia pestis Z176003]
 gi|320015466|gb|ADV99037.1| Flagellar basal-body rod protein flgF [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 209

 Score = 74.1 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 65/195 (33%), Gaps = 7/195 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A     +  +  A+N++N  T GFR        V   I        + V 
Sbjct: 1   MDHAIYTAMGAARQSLELQAVTANNLANASTPGFRAQLAAMRAV--PIDGPSLATRTMVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +    +    G+   +G  LD AL+ D + A++ P      TR+G  +++ +G + +  G
Sbjct: 59  TSTPGVDISQGTMNFSGRPLDVALQQDGYLAVQLPDGSEAYTRNGNIQISANGQM-TVQG 117

Query: 120 KYPVLDM---ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
              + D       P           +           +     +  V  + G +   + G
Sbjct: 118 YPLMGDNGPIDVPPQAAVTIAADGTISALNAGDSPNTIAQLGQIKRVQATAGEMMHGDDG 177

Query: 177 ISPNIPPTPLEDLSG 191
           +    P T     + 
Sbjct: 178 LFHLTPETQQARGAQ 192


>gi|241761151|ref|ZP_04759240.1| protein of unknown function DUF1078 domain protein [Zymomonas
           mobilis subsp. mobilis ATCC 10988]
 gi|241374770|gb|EER64231.1| protein of unknown function DUF1078 domain protein [Zymomonas
           mobilis subsp. mobilis ATCC 10988]
          Length = 418

 Score = 74.1 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/135 (23%), Positives = 53/135 (39%), Gaps = 4/135 (2%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK-NDIDQKISFVASG 62
           +F   L    A +  LS  ++N++N+ + GF+     F E+V                  
Sbjct: 2   AFYTSLTGLNAAQTDLSVTSNNIANSGSYGFKKTTTDFGELVADSPLASAKNIGQGTRLR 61

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALESP---RGIILTRDGRFKVTDDGSLVSASG 119
                   GS  +T   LD  + GD +F ++S      I LTRDG F    + ++V++ G
Sbjct: 62  ATIQDFTSGSMKTTNRALDMMVNGDGFFLVKSQGASGTISLTRDGSFLTDKNNNVVTSDG 121

Query: 120 KYPVLDMASVPIQIP 134
            Y  +        I 
Sbjct: 122 HYLQVYATDNSGNIY 136



 Score = 65.7 bits (158), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 15/94 (15%), Positives = 35/94 (37%), Gaps = 5/94 (5%)

Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISP-----NIPPTPLEDLSGVTVKRGFLEDSNAN 205
              ++  + L  V+   G     N+  +      N+     +     +V+ G LE SN +
Sbjct: 322 NQYILGAVALGDVNNRNGLHSTGNANWTVTGTSGNLNYREADTSGLGSVQSGALELSNID 381

Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              E+  +I   + F + +  I  + + +   + 
Sbjct: 382 LTQELVNLISEQRNFQANSKAISTDNQMVSYVMN 415


>gi|254255087|ref|ZP_04948404.1| Flagellar hook protein FlgE [Burkholderia dolosa AUO158]
 gi|124899732|gb|EAY71575.1| Flagellar hook protein FlgE [Burkholderia dolosa AUO158]
          Length = 419

 Score = 74.1 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 69/196 (35%), Gaps = 6/196 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SFNI L+   A+  +L  ++ N++N  T G++  +  FS                +    
Sbjct: 30  SFNIALSGIKAINGQLGEISQNIANAGTYGYKAGRANFSAFYL-----GSTPGGVMVGST 84

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  GS +STG+ +D AL G+ +F        ++ +R GRF     G+++   G+  
Sbjct: 85  SQAMNVAGSLVSTGSGMDAALPGNGFFVTRDANGALVYSRVGRFGTDQHGNVIDYMGRKV 144

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+   QI                           + V  +  F + +    +    
Sbjct: 145 QGYAAAGGGQIGDLSIPGGGIPAKASESVAYAGNMSADWVVPANGTFDKDDPQSYNRMSS 204

Query: 183 PTPLEDLSGVTVKRGF 198
            T L+ L    V   +
Sbjct: 205 QTVLDSLGREHVVNQY 220



 Score = 72.2 bits (175), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 10/93 (10%), Positives = 31/93 (33%), Gaps = 5/93 (5%)

Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMY 208
           +   + + +   + G V    +G   +                  +  G LE SN     
Sbjct: 327 IAGQLAVATFQNADGLVSVSGTGWHASAAAGEALYGVAGAGPIDKLVVGALEQSNVELTE 386

Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           E+  ++   Q + + + ++    + +   ++ +
Sbjct: 387 ELVNLMSAQQNYQANSKVLSTENEMVRTLMQTL 419


>gi|165925081|ref|ZP_02220913.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165939053|ref|ZP_02227605.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166008950|ref|ZP_02229848.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|167418761|ref|ZP_02310514.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167466336|ref|ZP_02331040.1| flagellar basal body rod protein FlgF [Yersinia pestis FV-1]
 gi|229840624|ref|ZP_04460783.1| Flagellar basal-body rod protein flgF [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229842825|ref|ZP_04462977.1| Flagellar basal-body rod protein flgF [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|294502790|ref|YP_003566852.1| hypothetical protein YPZ3_0680 [Yersinia pestis Z176003]
 gi|165913009|gb|EDR31634.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165923281|gb|EDR40432.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165992289|gb|EDR44590.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166962755|gb|EDR58776.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|229690092|gb|EEO82149.1| Flagellar basal-body rod protein flgF [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229696990|gb|EEO87037.1| Flagellar basal-body rod protein flgF [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|262360822|gb|ACY57543.1| hypothetical protein YPD4_0634 [Yersinia pestis D106004]
 gi|262364767|gb|ACY61324.1| hypothetical protein YPD8_0634 [Yersinia pestis D182038]
 gi|294353249|gb|ADE63590.1| hypothetical protein YPZ3_0680 [Yersinia pestis Z176003]
          Length = 197

 Score = 74.1 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 42/196 (21%), Positives = 76/196 (38%), Gaps = 6/196 (3%)

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
                     V S    +     S   TG +LD AL+     A+ S      TR+G+  V
Sbjct: 1   MGGGYSSRVAVLSQNAGVDMTPASLQETGRDLDIALKNQGLIAVLSGGREAYTRNGQMDV 60

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDM 165
           + +G  ++ +G   + D   + +       I + G    I Q G +     +     VD+
Sbjct: 61  SAEG-ALTINGLPVLGDGGPIVLPPYSALSIADDGTIAIIPQAGGIKTPEEIERIKLVDI 119

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225
               +R+ N G+  +    P      V V    LE SN +++ EM   I L+++F +   
Sbjct: 120 PANQLRKNNRGLLVSNRG-PAARDETVQVVNKHLESSNVSAISEMIASISLSRQFEAQIK 178

Query: 226 LIDENEKSMLEAIRNI 241
           ++   E  + +A   +
Sbjct: 179 MMKVAED-LAQAGNRM 193


>gi|90422996|ref|YP_531366.1| hypothetical protein RPC_1485 [Rhodopseudomonas palustris BisB18]
 gi|90105010|gb|ABD87047.1| protein of unknown function DUF1078-like [Rhodopseudomonas
           palustris BisB18]
          Length = 599

 Score = 73.7 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 51/132 (38%), Gaps = 12/132 (9%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +    +A        L  ++ N++N+ T  F+ I   F +++    ND  Q    V +  
Sbjct: 6   ALTTSVAGLRTQSYALENISGNIANSQTTAFKRIDTSFLDLIPQTGND-QQLAGSVTAKS 64

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRG-----------IILTRDGRFKVTDDG 112
              +   GS  S       A+ GD +FA++ P                TR G F +  +G
Sbjct: 65  RSTNTIQGSVQSASVSTYMAINGDGFFAVQKPGSFSDNNPVFTGVNNYTRRGDFSLDKNG 124

Query: 113 SLVSASGKYPVL 124
            LV+ +G Y   
Sbjct: 125 YLVNGAGYYLQG 136



 Score = 62.2 bits (149), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 14/123 (11%), Positives = 36/123 (29%)

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                D  +                    + +   +A + + + + +    R +      
Sbjct: 477 NQMQQDGYAAGQLTSVSVSNEGRVVGAYSNGRNIDLAEVSVATFNGANFLKRLDGGAFEV 536

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
                      G ++    LE SN +   E  ++I   Q +++ T +I      + + + 
Sbjct: 537 TNESGAALFGKGGSISGSSLEASNTDIADEFTKLIVTQQAYSANTKVITTANTMVSDLLN 596

Query: 240 NIA 242
            I 
Sbjct: 597 VIR 599


>gi|110641252|ref|YP_668982.1| flagellar hook protein FlgE [Escherichia coli 536]
 gi|191172366|ref|ZP_03033907.1| flagellar hook protein FlgE [Escherichia coli F11]
 gi|300982621|ref|ZP_07176205.1| flagellar hook protein FlgE [Escherichia coli MS 200-1]
 gi|110342844|gb|ABG69081.1| flagellar hook protein FlgE [Escherichia coli 536]
 gi|190907250|gb|EDV66848.1| flagellar hook protein FlgE [Escherichia coli F11]
 gi|300307086|gb|EFJ61606.1| flagellar hook protein FlgE [Escherichia coli MS 200-1]
 gi|324013350|gb|EGB82569.1| flagellar hook protein FlgE [Escherichia coli MS 60-1]
          Length = 401

 Score = 73.7 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 72/195 (36%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++        L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   AFSQAVSGLNVAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ +LV+  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q+                K   T  +     S   +   N+  + N  
Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDSLPSVNAFDASNAD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 177 SYNKKGSVTVFDSQG 191



 Score = 72.2 bits (175), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             +       +  +            +++ +++  + L +   ++G     ++  S    
Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 337

Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                       +  T+  G LE SN +   E+  MI   + + S    I   ++ +   
Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397

Query: 238 IR 239
           + 
Sbjct: 398 VN 399


>gi|322378866|ref|ZP_08053283.1| flagellar hook protein FlgE [Helicobacter suis HS1]
 gi|321148676|gb|EFX43159.1| flagellar hook protein FlgE [Helicobacter suis HS1]
          Length = 601

 Score = 73.7 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/145 (20%), Positives = 59/145 (40%), Gaps = 21/145 (14%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND------IDQ 54
           M  +     +     +  + ++++N++N +TVG+R  + +F  +  A  +        D 
Sbjct: 1   MNDTLLHAYSGIKTHQFGIDSLSNNLANINTVGYRENEPEFKSLFAAHFDSMSNNVTADD 60

Query: 55  KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA---------------LESPRGII 99
           +   VA G   +S + G ++ + ++ + A +G  WF                 +  +   
Sbjct: 61  RNFGVAKGSNAISDKDGEYMPSDSDFNMAYQGSGWFIVGPNKDGSFEIDKDGYKQSQENF 120

Query: 100 LTRDGRFKVTDDGSLVSASGKYPVL 124
            TRDG F    DG +V+  G Y   
Sbjct: 121 FTRDGNFLRDADGYIVNTHGYYVYG 145



 Score = 66.8 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 16/143 (11%), Positives = 43/143 (30%), Gaps = 17/143 (11%)

Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRE 173
              +       D     I    + +   +      +   + +  +G+ +    QG  +  
Sbjct: 456 YEDSRIYQVSQDGKPKGILRNMRIDDDGIIHLSFSNGAIETMGRVGIAAFTNDQGLKKVG 515

Query: 174 NS----------GISPNIPPTPLEDL-------SGVTVKRGFLEDSNANSMYEMGQMIHL 216
           ++          G +  +   P+              +   +LE SN N+   +  +I +
Sbjct: 516 SNLFDISNATRNGRAVPLSGNPILGWDRDDGKLKFGKIMHKYLETSNVNAGRSLTNLILM 575

Query: 217 TQKFNSITTLIDENEKSMLEAIR 239
            + ++         +  + EAI 
Sbjct: 576 QRGYSMNAKAFTTGDDLIKEAIN 598


>gi|238755324|ref|ZP_04616667.1| Flagellar hook protein FlgE [Yersinia ruckeri ATCC 29473]
 gi|238706460|gb|EEP98834.1| Flagellar hook protein FlgE [Yersinia ruckeri ATCC 29473]
          Length = 427

 Score = 73.7 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 58/134 (43%), Gaps = 6/134 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
            F+  ++   A    L  + +N++N+ T GF++  V F+++         Q    V    
Sbjct: 2   GFSQAVSGLNAASSNLDVIGNNIANSATSGFKSGSVSFADMFA-----GSQTGMGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +T   LD A+    +F LE    GI   R+G+F++ ++ ++VS  G + 
Sbjct: 57  ITQDFNDGTPTTTNRRLDLAISQSGFFRLEDSSGGISYARNGQFRLDENRNIVSQQGLHL 116

Query: 123 VLDMASVPIQIPQK 136
               A+      Q+
Sbjct: 117 TGYPATGTPPTVQQ 130



 Score = 69.1 bits (167), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 41/141 (29%), Gaps = 9/141 (6%)

Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
           G  +       VSA  +           QI +   +       +    G+++ T    + 
Sbjct: 289 GAMQQNTGSDSVSAQTQTGYAAGEFTGFQIEKDGSVVGTYSNQQKQLLGQIVLT----NF 344

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRG-----FLEDSNANSMYEMGQMIHLTQ 218
              +G   + ++              +      G      LE SN +   E+  MI   +
Sbjct: 345 ANPEGLSPQGDNVWKETGSSGAAIIGTAGGGGFGTLTSGALESSNVDLSKELVNMIVAQR 404

Query: 219 KFNSITTLIDENEKSMLEAIR 239
            + S    I   ++ +   + 
Sbjct: 405 NYQSNAQTIKTQDQILQTLVN 425


>gi|322380410|ref|ZP_08054616.1| flagellar hook protein FlgE [Helicobacter suis HS5]
 gi|321147200|gb|EFX41894.1| flagellar hook protein FlgE [Helicobacter suis HS5]
          Length = 601

 Score = 73.7 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/145 (20%), Positives = 59/145 (40%), Gaps = 21/145 (14%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND------IDQ 54
           M  +     +     +  + ++++N++N +TVG+R  + +F  +  A  +        D 
Sbjct: 1   MNDTLLHAYSGIKTHQFGIDSLSNNLANINTVGYRENEPEFKSLFAAHFDSMSNNVTADD 60

Query: 55  KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA---------------LESPRGII 99
           +   VA G   +S + G ++ + ++ + A +G  WF                 +  +   
Sbjct: 61  RNFGVAKGSNAISDKDGEYMPSDSDFNMAYQGSGWFIVGPNKDGSFEIDKDGYKQSQENF 120

Query: 100 LTRDGRFKVTDDGSLVSASGKYPVL 124
            TRDG F    DG +V+  G Y   
Sbjct: 121 FTRDGNFLRDADGYIVNTHGYYVYG 145



 Score = 66.8 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 16/143 (11%), Positives = 43/143 (30%), Gaps = 17/143 (11%)

Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRE 173
              +       D     I    + +   +      +   + +  +G+ +    QG  +  
Sbjct: 456 YEDSRIYQVSQDGKPKGILRNMRIDDDGIIHLSFSNGAIETMGRVGIAAFTNDQGLKKVG 515

Query: 174 NS----------GISPNIPPTPLEDL-------SGVTVKRGFLEDSNANSMYEMGQMIHL 216
           ++          G +  +   P+              +   +LE SN N+   +  +I +
Sbjct: 516 SNLFDISNATRNGRAVPLSGNPILGWDRDDGKLKFGKIMHKYLETSNVNAGRSLTNLILM 575

Query: 217 TQKFNSITTLIDENEKSMLEAIR 239
            + ++         +  + EAI 
Sbjct: 576 QRGYSMNAKAFTTGDDLIKEAIN 598


>gi|333008278|gb|EGK27752.1| flagellar hook protein flgE [Shigella flexneri K-272]
 gi|333019768|gb|EGK39040.1| flagellar hook protein flgE [Shigella flexneri K-227]
          Length = 390

 Score = 73.7 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 70/195 (35%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+F + ++ +L++  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFMLDENRNLLNMQGLQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q+                K   T  +     S   +       + N  
Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNAD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 177 SYNKKGSVTVFDSQG 191



 Score = 63.0 bits (151), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 21/163 (12%), Positives = 51/163 (31%), Gaps = 6/163 (3%)

Query: 72  SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPI 131
            F + GT +D A+  +      +      T    F  +   +  + +      +      
Sbjct: 229 EFNANGTLVDGAMANNIATGAINGAEPA-TFSLSFLNSMQQNTGANNIVATTQNGYKPGD 287

Query: 132 QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PL 186
            +  +            +++ +++  + L +   ++G     ++  S             
Sbjct: 288 LVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTA 347

Query: 187 EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
              +  T+  G LE SN +   E+  MI   + + S    I  
Sbjct: 348 GTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKT 390


>gi|261339376|ref|ZP_05967234.1| flagellar hook protein FlgE [Enterobacter cancerogenus ATCC 35316]
 gi|288318177|gb|EFC57115.1| flagellar hook protein FlgE [Enterobacter cancerogenus ATCC 35316]
          Length = 402

 Score = 73.7 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 18/150 (12%), Positives = 46/150 (30%), Gaps = 5/150 (3%)

Query: 95  PRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV 154
           P     T    F  +   +  + +      +       +  +            +++ +V
Sbjct: 251 PGATPATFAMSFANSMQQNTGANNIVATNQNGYKPGDLVSYQINDDGSVVGNYSNEQTQV 310

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLEDSNANSMYE 209
           +  + L +   ++G     ++  S                +  T+  G LE SN +   E
Sbjct: 311 LGQIVLANFANNEGLKSEGDNVWSATQSSGVALLGTAGSGNFGTLTNGALEASNVDLSKE 370

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +  MI   + + S    I   ++ +   + 
Sbjct: 371 LVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400



 Score = 73.0 bits (177), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 69/192 (35%), Gaps = 11/192 (5%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGSASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F + ++   +  +R+G+FK+ ++ +LV+  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRMVDANGSVFYSRNGQFKLDENRNLVNMQGLQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
                +          +        IS    ++A     +          + +       
Sbjct: 117 TGYPVAGTPP-----TVQTGANPQAISIPTTLMAAKSTTTASQQINLNSTDTAPTKAFDA 171

Query: 183 PTPLEDLSGVTV 194
             P       TV
Sbjct: 172 TNPDTYNKKGTV 183


>gi|117926844|ref|YP_867461.1| hypothetical protein Mmc1_3570 [Magnetococcus sp. MC-1]
 gi|117610600|gb|ABK46055.1| protein of unknown function DUF1078 domain protein [Magnetococcus
           sp. MC-1]
          Length = 496

 Score = 73.7 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/217 (14%), Positives = 66/217 (30%), Gaps = 14/217 (6%)

Query: 33  GFRTIKVKFSEVVGAIKNDIDQKISFVAS------GKEYLSKEVGSFISTGTELDFALEG 86
           G+    + F +  G +  +    I+F  +        + +  + G  I+     DF++  
Sbjct: 279 GYTAGVLTF-DTYGRLDTEGSTPITFQFTGNSSTAETQQILFDFGDAITADATNDFSIAD 337

Query: 87  DAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG 146
            A           +   G        S  +          A     +     +       
Sbjct: 338 GAVLYGSGTNTAEVANTGLLGSVQRASSFTTMSASQNGFSAGFLESLSVG--LDGTINGT 395

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPN-----IPPTPLEDLSGVTVKRGFLED 201
             + + K +  +GL   D  Q   +   +  +                +  T++   LE+
Sbjct: 396 YTNGETKALYQIGLVDFDNEQALDQVGANLFAETHLSGVPREGEPNSGALGTIRSYTLEN 455

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           SN +   EM  MI   + F + + LI   +  + E I
Sbjct: 456 SNVDMSNEMVNMITTQRAFQANSRLITVTDGMLEELI 492



 Score = 73.0 bits (177), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 61/214 (28%), Gaps = 22/214 (10%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN-----DIDQKIS 57
            +   G +A       ++ + +N+SNT+T  F+  +  F +V+             Q  +
Sbjct: 5   QAMYAGSSALTNYGNAMTVIGNNLSNTNTTAFKGSRTTFEDVLIQTVGISGTRASTQIGT 64

Query: 58  FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP-----------------RGIIL 100
            V         + G F  T T  D A++G  +F +                         
Sbjct: 65  GVGVSAIDQLMQQGGFAGTSTVTDLAIDGQGFFKVRDANPGSAQLGGGGGNATSSMDTFY 124

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           TR G FK   DG +V+ +G                           + ++     A    
Sbjct: 125 TRAGDFKQNLDGYMVTNAGLILQGYAVDQTSGETSGSMTDINLATYQSAEPKATTAISVG 184

Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTV 194
             +      +   N        P      + + V
Sbjct: 185 MMLQSDAAIITDANHSTYDPNDPASYNYATPIRV 218


>gi|157959902|ref|YP_001499936.1| flagellar hook protein FlgE [Shewanella pealeana ATCC 700345]
 gi|157844902|gb|ABV85401.1| flagellar basal body FlaE domain protein [Shewanella pealeana ATCC
           700345]
          Length = 402

 Score = 73.7 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 58/144 (40%), Gaps = 6/144 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SFNI L+   A  Q L+T+++N++N+ TVGFR+ + +FS +      +  Q         
Sbjct: 2   SFNIALSGLQATTQDLNTISNNIANSSTVGFRSGRSEFSAIY-----NGGQAGGVNVMST 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  GS   TG +LD  ++G+ +F L          R G F    DG +   +G   
Sbjct: 57  SQNFSMGGSLTYTGRQLDMGIQGEGFFVLSGQDGSTSYARAGMFNQDADGYITDPAGNRL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKG 146
                     +   +      + G
Sbjct: 117 QGYSIGATGNLQNGNVTDLQVQTG 140



 Score = 68.4 bits (165), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 62/204 (30%), Gaps = 15/204 (7%)

Query: 43  EVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTR 102
            V   +       +       +           T    D A+ G A         +   +
Sbjct: 209 SVHYNMDGTDVTPVGGHTLEFDSNGMLTTGNDITLNITDAAIIGGA---SNMELALSFDK 265

Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162
             ++    + S ++ +G           I+I     ++     G+   +G+V+    L  
Sbjct: 266 STQYAADYNNSSLNQNGYT---SGELNGIRIDDNGMLYGTYTNGQEQIQGQVV----LAD 318

Query: 163 VDMSQGFVRRENSGI-SPNIPPTP----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217
                G V   N+   + N    P        +   +  G+LE SN +   EM  ++   
Sbjct: 319 FSNPNGLVPTSNNAWTASNAAGQPIIGTPTTGTLGGLSAGYLEGSNVDQTAEMVNLMTAQ 378

Query: 218 QKFNSITTLIDENEKSMLEAIRNI 241
           + + S   ++D N       +  I
Sbjct: 379 RNYQSNAKVLDTNSTMQQALLNAI 402


>gi|167626155|ref|YP_001676449.1| flagellar hook protein FlgE [Shewanella halifaxensis HAW-EB4]
 gi|167356177|gb|ABZ78790.1| flagellar basal body FlaE domain protein [Shewanella halifaxensis
           HAW-EB4]
          Length = 402

 Score = 73.7 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 58/144 (40%), Gaps = 6/144 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SFNI L+   A  Q L+T+++N++N+ TVGFR+ + +FS +      +  Q         
Sbjct: 2   SFNIALSGLQATTQDLNTISNNIANSSTVGFRSGRSEFSAIY-----NGGQAGGVNVMNT 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  GS   TG +LD  ++G+ +F L          R G F    DG +   +G   
Sbjct: 57  SQNFSAGGSLTYTGRQLDMGIQGEGFFMLSGQDGSTTYARAGMFNQNADGFITDPAGSRL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKG 146
                     +   +      + G
Sbjct: 117 QGYPVGATGNLQTGNVTDLQVQAG 140



 Score = 69.5 bits (168), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 16/145 (11%), Positives = 39/145 (26%), Gaps = 6/145 (4%)

Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI-ATMGLY 161
                        S      +        ++       +    G  +   + +   + L 
Sbjct: 258 SLALSYDKSTQYASDYNNSSLSQNGYTSGELNGIRLDDSGMLYGTYTNGQEQLQGQVVLA 317

Query: 162 SVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
             +   G     N+  +                +  ++  G+LE SN +   EM  ++  
Sbjct: 318 DFNNPNGLEPVSNNAWAATNAAGQPIIGTPTTGTLGSIAGGYLEGSNVDQTAEMVNLMTA 377

Query: 217 TQKFNSITTLIDENEKSMLEAIRNI 241
            + + S   ++D N       +  I
Sbjct: 378 QRNYQSNAKVLDTNSTMQQALLNAI 402


>gi|296102908|ref|YP_003613054.1| flagellar hook protein FlgE [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
 gi|295057367|gb|ADF62105.1| flagellar hook protein FlgE [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
          Length = 402

 Score = 73.7 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 71/192 (36%), Gaps = 11/192 (5%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGSASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F + ++   +  +R+G+FK+ ++ +LV+  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRMVDANGSVFYSRNGQFKLDENRNLVNMQGMQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
                +          +        I+    ++A     +          + +  +   P
Sbjct: 117 TGYPVAGTPS-----TVQTGANPQPINIPTTLMAAKATTTASQQINLNSTDTAPTTAFDP 171

Query: 183 PTPLEDLSGVTV 194
             P       TV
Sbjct: 172 ANPDTYNKKGTV 183



 Score = 72.6 bits (176), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 18/150 (12%), Positives = 46/150 (30%), Gaps = 5/150 (3%)

Query: 95  PRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV 154
           P     T    F  +   +  + +      +       +  +            +++ +V
Sbjct: 251 PGATPATFAMSFANSMQQNTGANNIVGTSQNGFKPGDLVSYQINDDGTVVGNYSNEQTQV 310

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLEDSNANSMYE 209
           +  + L +   ++G     ++  S                +  T+  G LE SN +   E
Sbjct: 311 LGQIVLANFANNEGLKSEGDNVWSATQSSGVALLGTAGSGNFGTLTNGALEASNVDLSKE 370

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +  MI   + + S    I   ++ +   + 
Sbjct: 371 LVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400


>gi|209884509|ref|YP_002288366.1| flagellar basal body FlaE domain protein [Oligotropha
           carboxidovorans OM5]
 gi|209872705|gb|ACI92501.1| flagellar basal body FlaE domain protein [Oligotropha
           carboxidovorans OM5]
          Length = 602

 Score = 73.4 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 15/123 (12%), Positives = 36/123 (29%)

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                D                       + +   +A + L + +      R +      
Sbjct: 480 NQIQNDGFPAGQLQTVSISNNGRVVGNYSNGRNIDLAAITLATFNGPNFLKRVDGGAFEV 539

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
                      G T+    LE SN +   E  ++I   Q +++ T +I  + + + + + 
Sbjct: 540 TDESGQALFGKGGTIVGSSLEGSNTDIADEFTKLIVTQQAYSANTKVITTSNQMVQDLLN 599

Query: 240 NIA 242
            + 
Sbjct: 600 VLR 602



 Score = 71.1 bits (172), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 51/139 (36%), Gaps = 12/139 (8%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +    +A   +    L  ++ N++N+ T  F+ I   F +++    ++  Q    V S  
Sbjct: 6   ALTTSVAGLRSQSYALENISGNIANSQTTAFKRIDTSFLDLIPDTGSNS-QLAGSVRSSS 64

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRG-----------IILTRDGRFKVTDDG 112
              +   G   +       A+ GD +FA++ P                TR G F +  +G
Sbjct: 65  RETNTVQGDVQAAAVSTYMAINGDGFFAVQKPGSFTDNNPVFDGVDRYTRRGDFTLDKNG 124

Query: 113 SLVSASGKYPVLDMASVPI 131
            LV+ +G Y          
Sbjct: 125 YLVNGAGYYLEGIPIDPTT 143


>gi|311280017|ref|YP_003942248.1| fagellar hook-basal body protein [Enterobacter cloacae SCF1]
 gi|308749212|gb|ADO48964.1| fagellar hook-basal body protein [Enterobacter cloacae SCF1]
          Length = 402

 Score = 73.4 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 69/195 (35%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ +LV+  G   
Sbjct: 57  ITQDFTDGTTTNTGRALDVAISQNGFFRLVDSNGSVYYSRNGQFKLDENRNLVNMQGLQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q+                K   T  +     S           +    
Sbjct: 117 TGYPATGTPPTIQQGANPVALNVPNTLMAAKTTTTAAMQINLNSTDKTPTVTPFDATKAD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 177 SYNKKGSVTVYDSQG 191



 Score = 73.4 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 17/144 (11%), Positives = 44/144 (30%), Gaps = 5/144 (3%)

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           T    F  +   +  S +      +       +  +            +++ +V+  + L
Sbjct: 257 TFALSFANSMQQNTGSNNIVATNQNGYKPGDLVSYQINDDGTVVGNYSNEQTQVLGQIVL 316

Query: 161 YSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIH 215
            +   ++G     ++  S                +   +  G LE SN +   E+  MI 
Sbjct: 317 ANFANNEGLQSEGDNVWSATKSSGVALLGTAGTGNFGKLTNGALEASNVDLSKELVNMIV 376

Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239
             + + S    I   ++ +   + 
Sbjct: 377 AQRNYQSNAQTIKTQDQILNTLVN 400


>gi|295687864|ref|YP_003591557.1| fagellar hook-basal body protein [Caulobacter segnis ATCC 21756]
 gi|295429767|gb|ADG08939.1| fagellar hook-basal body protein [Caulobacter segnis ATCC 21756]
          Length = 425

 Score = 73.4 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 55/135 (40%), Gaps = 6/135 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           + +  ++   A  + LS +++N++N+ T  ++T  V F  +V           S V +  
Sbjct: 6   ALSTAVSGLTAQSRALSAISENIANSSTTAYKTTDVYFQALVSG-GKGSSTSTSAVTAKS 64

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPR-----GIILTRDGRFKVTDDGSLVSAS 118
                  G+  ST    + A++   +F + S         + TR+G F+   DG L++  
Sbjct: 65  SQAMSVQGTVTSTSVATNVAIQDAGFFVVTSDPAGAASEDMYTRNGSFETNADGYLINTE 124

Query: 119 GKYPVLDMASVPIQI 133
           G Y +         +
Sbjct: 125 GFYLMGWPTDAEGNV 139



 Score = 55.6 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 11/93 (11%), Positives = 28/93 (30%), Gaps = 5/93 (5%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMYE 209
           I  + + +     G      +    N            +    ++    LE S  +   E
Sbjct: 333 IYQIPIATFSNPNGLTLVSGTTYDENSAAGQVHLNLPGEGGAGSLVASALEGSTTDIATE 392

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
             +MI   Q +++ + ++          I+ + 
Sbjct: 393 FNKMIIAQQAYSAASQVVSSASDMFDSLIQAVR 425


>gi|218660672|ref|ZP_03516602.1| flagellar hook protein FlgE [Rhizobium etli IE4771]
          Length = 374

 Score = 73.4 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/201 (13%), Positives = 59/201 (29%), Gaps = 8/201 (3%)

Query: 39  VKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98
             F     A+        +  A G   L+ +    ++TG  ++            + + I
Sbjct: 179 AMFRNADAAVGGTTSFPYTTAAVGTGTLNFDANGKLTTGGAVNI-------VDPVTGQTI 231

Query: 99  ILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158
            +   G  ++  D S            +  V I               +   +  +    
Sbjct: 232 AMDFSGFTQLGADFSGTGTPNGQAATPVKDVTIDGDGIVYAKYEDGSTKPLYRIPLANVA 291

Query: 159 GLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
               + +  G V   N      +   P  +    T+K G LE SN +   E+ +MI   +
Sbjct: 292 SPDKLTLMSGNVYSANGQSGVTVTGFPQTNG-LGTIKSGALEGSNVDLAGELTEMIESQR 350

Query: 219 KFNSITTLIDENEKSMLEAIR 239
            + + + +       M   + 
Sbjct: 351 SYTANSKVFQTGSDIMDVLVN 371


>gi|310816852|ref|YP_003964816.1| flagellar hook protein FlgE [Ketogulonicigenium vulgare Y25]
 gi|308755587|gb|ADO43516.1| flagellar hook protein FlgE [Ketogulonicigenium vulgare Y25]
          Length = 432

 Score = 73.4 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/167 (20%), Positives = 64/167 (38%), Gaps = 9/167 (5%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
           +S N G+A   A   +L+T++DN++N+ T G++  + +F  +V    +        V + 
Sbjct: 5   SSMNAGVAGLSANANKLATISDNIANSSTNGYKRAQTEFYAMVIGSSSTKYTAG-GVRTT 63

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI--------ILTRDGRFKVTDDGSL 114
              +  E G  +ST    D A+ G  +  + +   I         +T  G F     G L
Sbjct: 64  ATRVIDERGPLVSTSNATDIAISGRGFLPVTTLSAIEAGGALPFQMTTTGSFSPNAAGYL 123

Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLY 161
            +ASG   +   A     I  +      G         +V+ +    
Sbjct: 124 TTASGHVLMGWAADSTGSIGTQSRDTTSGLTPVRVLTNQVVGSPTTQ 170



 Score = 68.4 bits (165), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 11/93 (11%), Positives = 29/93 (31%), Gaps = 5/93 (5%)

Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLEDSNANS 206
            +++  + +  V    G     +   + +                  +     E S  + 
Sbjct: 337 TRLLYQIPVVDVPNVNGLQALGSQTYAVSQDSGAFFLWDAGAGPTGEMLGYASEGSAVDV 396

Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             E+ QMI   + ++S   +I   ++ + E   
Sbjct: 397 ATELTQMIQTQRAYSSNAKVIQTVDEMLQETTN 429


>gi|222147375|ref|YP_002548332.1| flagellar hook protein FlgE [Agrobacterium vitis S4]
 gi|221734365|gb|ACM35328.1| flagellar hook protein [Agrobacterium vitis S4]
          Length = 411

 Score = 73.4 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 11/131 (8%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
           ++ N  ++   A   +L+++ DN+SNT T G++  +  FS +V               S 
Sbjct: 5   SAMNSSVSGLTAQSNKLTSIGDNISNTSTTGYKGTETAFSSLVNG----------GTTST 54

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWF-ALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
                 + G   ST +E D A++GD +F   +    + LTR G F++ +DG LV++SG  
Sbjct: 55  TTQTVSQSGDLESTSSETDLAIDGDGYFVVQDDEGDVFLTRQGDFEIDEDGYLVNSSGYT 114

Query: 122 PVLDMASVPIQ 132
            +         
Sbjct: 115 LLGYSYDNGEP 125



 Score = 72.6 bits (176), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 12/93 (12%), Positives = 29/93 (31%), Gaps = 5/93 (5%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYE 209
              + L +V           +    +     +        S  T++   LE SN +   E
Sbjct: 319 TYKIALATVASPDNLEEVGGTAYKVDADSGTVVVGFAGTGSFGTIESSTLESSNVDLASE 378

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           +  MI   + +++ + +       +   I  + 
Sbjct: 379 LSDMIAAQRAYSANSKVFQTAADMLDTVINMVR 411


>gi|330945585|gb|EGH47092.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           pisi str. 1704B]
          Length = 153

 Score = 73.4 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 53/147 (36%), Gaps = 3/147 (2%)

Query: 98  IILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157
              TR     +   G L   SG   + +   + +   Q+ EI   G     S        
Sbjct: 4   EAYTRSSGMNIDALGVLRDGSGLPVMGNGGPIAVPPQQQIEIGADGTISIRSLGESPQVM 63

Query: 158 MGLYS---VDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMI 214
             +     V      + +   G+       P +  + V V+ GFL+ SN N++ EM  ++
Sbjct: 64  AQVDRIKLVRPDLKTMEKGPDGLIHTKTGRPADADATVQVESGFLQASNVNAVEEMTSVL 123

Query: 215 HLTQKFNSITTLIDENEKSMLEAIRNI 241
            L+++F     ++   E+      R +
Sbjct: 124 ALSRQFELHVKMMKTAEEDDQSMARVL 150


>gi|315926654|gb|EFV06034.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           DFVF1099]
          Length = 594

 Score = 73.4 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 18/144 (12%), Positives = 46/144 (31%), Gaps = 5/144 (3%)

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           T      +    S  + +G+      +        + +          + K   +A M +
Sbjct: 448 TSGSNDGLVSSNSASTLTGQATDGYTSGNLKPDAIRVDDKGNILGEFTNGKTFAVAKMAM 507

Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIH 215
            SV  + G      +          +      T     +K   LE SN +    + ++I 
Sbjct: 508 ASVANNSGLEEIGGNLFKVTANSGAIVVGEAGTGGRGEMKTSALEMSNVDLSRSLTELII 567

Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239
           + + + + +  I  +++ +   I+
Sbjct: 568 IQRGYQANSKTISTSDQMLQTLIQ 591


>gi|161503735|ref|YP_001570847.1| flagellar hook protein FlgE [Salmonella enterica subsp. arizonae
           serovar 62:z4,z23:-- str. RSK2980]
 gi|160865082|gb|ABX21705.1| hypothetical protein SARI_01820 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 402

 Score = 73.4 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 60/134 (44%), Gaps = 6/134 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SF+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   SFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ +LV+  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGMQL 116

Query: 123 VLDMASVPIQIPQK 136
               A+      Q+
Sbjct: 117 TGYPATGTPPTIQQ 130



 Score = 73.4 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 15/147 (10%), Positives = 45/147 (30%), Gaps = 5/147 (3%)

Query: 98  IILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157
              T    F  +   +  + +      +       +  +            +++ +V+  
Sbjct: 254 TAATFSLNFLNSMQQNTGANNIVATNQNGYKPGDLVSYQINNDGTVVGNYSNEQEQVLGQ 313

Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQ 212
           + L +   ++G   + ++  +                +   +  G LE SN +   E+  
Sbjct: 314 IVLANFANNEGLASQGDNVWAATQASGVALLGTAGSGNFGKLTNGALEASNVDLSKELVN 373

Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIR 239
           MI   + + S    I   ++ +   + 
Sbjct: 374 MIVAQRNYQSNAQTIKTQDQILNTLVN 400


>gi|226327745|ref|ZP_03803263.1| hypothetical protein PROPEN_01618 [Proteus penneri ATCC 35198]
 gi|225203449|gb|EEG85803.1| hypothetical protein PROPEN_01618 [Proteus penneri ATCC 35198]
          Length = 160

 Score = 73.4 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 43/116 (37%), Gaps = 3/116 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M       +       +  + VA+N++N  T GF+        V   +  D     +   
Sbjct: 1   MDHVIYTAMGGARHSMENQAVVANNLANASTPGFKAQLSAMRAV--PVNGDTLPTRTLTV 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLV 115
           +      +  G+   TG  +D AL  + + A++        TR+G  +   DG L+
Sbjct: 59  ASTPGSDQSQGTMNYTGRSMDVALSDNGYLAVQLEDGTEAYTRNGNIQRNADGMLM 114


>gi|197285510|ref|YP_002151382.1| flagellar hook protein FlgE [Proteus mirabilis HI4320]
 gi|227356001|ref|ZP_03840393.1| flagellar hook protein [Proteus mirabilis ATCC 29906]
 gi|194682997|emb|CAR43446.1| flagellar hook protein [Proteus mirabilis HI4320]
 gi|227163989|gb|EEI48891.1| flagellar hook protein [Proteus mirabilis ATCC 29906]
          Length = 406

 Score = 73.4 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 64/192 (33%), Gaps = 6/192 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SF+  ++   A    L T+ +N+SN+ T GF+   V F++V       +  K+S ++   
Sbjct: 2   SFSQAVSGLNAAAANLDTIGNNISNSATYGFKGATVSFADVFAGSGAGLGVKVSGIS--- 58

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASGKYP 122
              + + GS  +T    D A+ G  +F +E    G+  +R+G F    +G L +  G   
Sbjct: 59  --QNFKDGSITTTNRPTDVAISGGGFFRIEDSNGGVFYSRNGEFGKDKNGYLTNMQGMRI 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
                          +          +      AT  +             +       P
Sbjct: 117 TGYPVQNVDGKNVVQKGATPTPIIIPTDMMNASATDKMDMTVNLNSAEEAIDQTTHKFDP 176

Query: 183 PTPLEDLSGVTV 194
                      V
Sbjct: 177 KDNDSYNFSTNV 188



 Score = 72.6 bits (176), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 15/121 (12%), Positives = 35/121 (28%), Gaps = 5/121 (4%)

Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183
            +          + E          +Q+ +V+  + L +     G   + ++  S     
Sbjct: 284 QNGYQAGEFTNFRIEPDGSIMATYSNQQSQVVGQIALANFANPGGLSSQGDNMWSETNGS 343

Query: 184 TPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
                          +    LE SN +   E+  MI   + + S    I   ++ +   +
Sbjct: 344 GSPIVGVAGSGVFGKLTNNALEASNVDMSQELVNMIVAQRNYQSNAQTIKTQDQILQTLV 403

Query: 239 R 239
            
Sbjct: 404 S 404


>gi|322832564|ref|YP_004212591.1| flagellar hook-basal body protein [Rahnella sp. Y9602]
 gi|321167765|gb|ADW73464.1| flagellar hook-basal body protein [Rahnella sp. Y9602]
          Length = 414

 Score = 73.4 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 56/130 (43%), Gaps = 6/130 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SF+  ++   A    L  + +N++N+ TVGF+T    F+++         Q    V    
Sbjct: 2   SFSQAVSGLSAASTNLDVIGNNIANSATVGFKTATASFADMFA-----GSQTGMGVKVAA 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122
              +   G+  +T   LD AL G+ +F L      +  +R+G+F +  + +LV+  G   
Sbjct: 57  VTQNFNDGTTTNTSRGLDVALSGNGFFRLTDTSGAVYYSRNGQFSLDANRNLVNMQGLSV 116

Query: 123 VLDMASVPIQ 132
               A+    
Sbjct: 117 TGFPATGTPP 126



 Score = 73.0 bits (177), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 19/144 (13%), Positives = 40/144 (27%), Gaps = 5/144 (3%)

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           T    F  +   S  S S      D  +                    + K +++  + L
Sbjct: 269 TVSLDFTGSIQQSTGSDSIGSQTQDGYAAGQMTGYTINDDGTISGTYSNNKTQLLGQIVL 328

Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIH 215
            +    +G     ++  +                   ++  G LE SN +   E+  MI 
Sbjct: 329 SNFSNPEGLKSEGDNVWTATASSGQAVTGIAGQGGLASMTSGALESSNVDLSAELVNMIV 388

Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239
             + + S    I   +  +   + 
Sbjct: 389 AQRNYQSNAQTIKTQDSILNTLVN 412


>gi|254488501|ref|ZP_05101706.1| flagellar hook protein FlgE [Roseobacter sp. GAI101]
 gi|214045370|gb|EEB86008.1| flagellar hook protein FlgE [Roseobacter sp. GAI101]
          Length = 432

 Score = 73.4 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 44/243 (18%), Positives = 85/243 (34%), Gaps = 20/243 (8%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
           +S N G+A   A   RL++V+DN++N+ T G++ +   F+ +V +  +        V + 
Sbjct: 5   SSLNAGVAGLQANATRLASVSDNIANSSTYGYKRVVTDFNSLVLSEGSSSYTAG-GVRAS 63

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALE---------SPRGIILTRDGRFKVTDDGS 113
            + L  E G+ +ST    D A+ G  +  +              ++LT  G F++  +G 
Sbjct: 64  SQRLLGEDGALVSTTNSTDLAVRGRGFLPVTTATEFNANSETPEMMLTTTGSFRLDAEGF 123

Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRE 173
           L + SG   +   A+    IP      + G +                 + ++       
Sbjct: 124 LKTESGLLLMGWPANADGSIPIYPRDTDDGLRPVQFALNLNGDPTTRVDMSLNLPATATA 183

Query: 174 NSGISPNIPPTPLEDLSGVTVKRGFLE-DSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
             G       +     +  T K   +E   N                      L+D  + 
Sbjct: 184 AGGSGEPQILSIEYFDNLGTSKSISMEFTPNV-PATGTTN--------EWNVKLMDSAQG 234

Query: 233 SML 235
            +L
Sbjct: 235 GLL 237



 Score = 68.7 bits (166), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 46/143 (32%), Gaps = 17/143 (11%)

Query: 97  GIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156
            I LT+DG       G  V  +G    +    +   I Q   I     +G +S       
Sbjct: 304 PIALTKDGSPIGNMAGVEVDENGYVNAIYDNGLRNTIYQIPLIDMPNPEGMVSL------ 357

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
                    +Q ++    SG           +     +K    E+S  +   E+  MI  
Sbjct: 358 --------DAQTYLPSTKSGAY---FLWDSGEGPTGDIKSYSREESTTDVATELTTMIRT 406

Query: 217 TQKFNSITTLIDENEKSMLEAIR 239
            + ++S   +I   ++ + E   
Sbjct: 407 QRAYSSNAKVIQTVDEMLQETTN 429


>gi|209966998|ref|YP_002299913.1| flagellar hook protein FlgE [Rhodospirillum centenum SW]
 gi|209960464|gb|ACJ01101.1| flagellar hook protein FlgE [Rhodospirillum centenum SW]
          Length = 655

 Score = 73.4 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 59/163 (36%), Gaps = 11/163 (6%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +    +    A  + L  ++DN++N+ T+G++ ++  F  ++    + +      V +  
Sbjct: 6   AMTTAVGGLTAQSRSLGHISDNIANSQTIGYKRVETSFQNLITQSNSSVHSPG-GVRARP 64

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGI----------ILTRDGRFKVTDDGS 113
            Y +   G+   T    + A+ G  +F +     +            TR G F +  +G 
Sbjct: 65  SYTNNIQGNVSQTQFATNMAISGSGFFQVSRGEEVSGTVNFQSQAYFTRAGDFSLDKNGY 124

Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156
           L +++G Y           + ++     +  +  I        
Sbjct: 125 LRNSAGYYLNGWGLRSGTNVVERGTPQPIRVQQLIDNPTATTN 167



 Score = 68.0 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 11/98 (11%), Positives = 37/98 (37%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLED 201
             + + +V+A + ++ V    G  + + +          +      +     +    +E 
Sbjct: 555 YDNGRSRVLAQIPIFQVSNPNGMQKTDGNAYVATTDSGAVRASGAGENGAGNLVVSSIEG 614

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E  ++I   + +++ T ++      ++E + 
Sbjct: 615 SNVDIADEFTKLIVTQRAYSANTRVVTSANDMLVEVLN 652


>gi|261821153|ref|YP_003259259.1| flagellar hook protein FlgE [Pectobacterium wasabiae WPP163]
 gi|261605166|gb|ACX87652.1| fagellar hook-basal body protein [Pectobacterium wasabiae WPP163]
          Length = 405

 Score = 73.4 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 56/133 (42%), Gaps = 7/133 (5%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
            F+  ++   A    L  + +N++N+ TVGF++  V F+++         +    V    
Sbjct: 2   GFSQAVSGLNAASNNLDVIGNNIANSATVGFKSGAVTFADMFA-----GSKVGMGVKVAS 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  S+  +LD A+ G  ++   ++      +R+G+F +    ++V+A G   
Sbjct: 57  VLQDFGNGTVTSSSRDLDIAISGGGFYRLQDTNGSTYYSRNGQFMLNGR-NIVNAQGMQL 115

Query: 123 VLDMASVPIQIPQ 135
                +    + Q
Sbjct: 116 TGYPVTGTPPVVQ 128



 Score = 71.1 bits (172), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 17/123 (13%), Positives = 35/123 (28%), Gaps = 5/123 (4%)

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
           P+ +  +               E    + + + +  + L S    +G     ++  S   
Sbjct: 281 PIQNGYAPGALTGFAINDDGTIEGNYSNGQKQPLGQILLASFANPEGLSPEGDNAWSETA 340

Query: 182 PPTPLEDLSGVTVKRGFL-----EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                      T   G L     E SN +   E+  MI   + + S    I   +  +  
Sbjct: 341 SSGQAVVGLAGTGSLGKLIGKSTESSNVDLSKELVNMIVAQRNYQSNAQTIKTQDSILQT 400

Query: 237 AIR 239
            + 
Sbjct: 401 LVS 403


>gi|187734244|ref|YP_001880752.1| flagellar hook protein FlgE [Shigella boydii CDC 3083-94]
 gi|187431236|gb|ACD10510.1| flagellar hook protein FlgE [Shigella boydii CDC 3083-94]
          Length = 402

 Score = 73.4 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 21/173 (12%), Positives = 55/173 (31%), Gaps = 6/173 (3%)

Query: 72  SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPI 131
            F + GT +D A+  +      +      T    F  +   +  + +      +      
Sbjct: 229 EFNANGTLVDGAMANNIATGAINGADPA-TFSLSFLNSMQQNTGANNIVATPQNGYKPGD 287

Query: 132 QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PL 186
            +  +            +++ +++  + L +   ++G     ++  S             
Sbjct: 288 LVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTA 347

Query: 187 EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              +  T+  G LE SN +   E+  MI   + + S    I   ++ +   + 
Sbjct: 348 GTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400



 Score = 72.2 bits (175), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 70/195 (35%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N+ N+ T GF++    F+++         +    V    
Sbjct: 2   AFSQAVSGLNAAATNLDVIGNNIVNSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ +LV+  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q+                K   T  +     S   +       + N  
Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNAD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 177 SYNKKGSVTVFDSQG 191


>gi|213026536|ref|ZP_03340983.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 110

 Score = 73.0 bits (177), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 55/114 (48%), Gaps = 6/114 (5%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SF+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   SFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVS 116
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ +LV+
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVN 110


>gi|283833630|ref|ZP_06353371.1| flagellar hook protein FlgE [Citrobacter youngae ATCC 29220]
 gi|291071313|gb|EFE09422.1| flagellar hook protein FlgE [Citrobacter youngae ATCC 29220]
          Length = 411

 Score = 73.0 bits (177), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 13/122 (10%), Positives = 40/122 (32%), Gaps = 5/122 (4%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             +       +  +            +++ +V+  + L +   ++G   + ++  +    
Sbjct: 288 NQNGYKPGDLVSYQINNDGTVVGNYSNEQKQVLGQIVLANFANNEGLASQGDNVWAATQS 347

Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                     + +   +  G LE SN +   E+  MI   + + S    I   ++ +   
Sbjct: 348 SGVALLGTAGEGNFGKLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 407

Query: 238 IR 239
           + 
Sbjct: 408 VN 409



 Score = 72.6 bits (176), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 60/134 (44%), Gaps = 6/134 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGAASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F + +S   +  +R+G+FK+ ++ ++V+  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRMVDSNGSVFYSRNGQFKLDENRNIVNMQGLQL 116

Query: 123 VLDMASVPIQIPQK 136
               A+      Q+
Sbjct: 117 TGYPATGTPPTVQQ 130


>gi|301166803|emb|CBW26380.1| putative flagellar hook protein [Bacteriovorax marinus SJ]
          Length = 414

 Score = 73.0 bits (177), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 39/164 (23%), Positives = 65/164 (39%), Gaps = 3/164 (1%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK---NDIDQKISFVAS 61
            NI       L ++L  V DN++N  T GF+  + +FSE++       +  DQ  +    
Sbjct: 7   LNITANTSKQLGRKLEMVGDNINNAGTNGFKGSRAEFSEMLNTASMGADGGDQVGAGAII 66

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
                    G+   + +  D A++G   FA+ +P G   TRDG F+   DG LV++ G  
Sbjct: 67  DASKRDLSQGTLAHSNSATDLAIDGTGLFAVNTPFGQAYTRDGSFRFDKDGYLVTSDGHK 126

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
            +        +      +         S    V  TM L + + 
Sbjct: 127 VLGYNGEEGQESNTVSPLQLSNGSMNASATSNVSMTMNLDARED 170



 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 11/97 (11%), Positives = 29/97 (29%), Gaps = 5/97 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLED 201
             + K   +  + +      QG  R   +    N     +            ++   +E 
Sbjct: 315 YDNGKSVQLGKIAVAKFTNEQGLRRVGQNLFVGNQTSGQVSLGKSGEQGRGDIRTNAIEQ 374

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           SN +       M+   + F++ +  +   +  +   I
Sbjct: 375 SNVDITNNFVDMMKTQKSFSANSEAMSAIDGLLKNVI 411


>gi|323527713|ref|YP_004229866.1| flagellar hook-basal body protein [Burkholderia sp. CCGE1001]
 gi|323384715|gb|ADX56806.1| flagellar hook-basal body protein [Burkholderia sp. CCGE1001]
          Length = 502

 Score = 73.0 bits (177), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 68/182 (37%), Gaps = 3/182 (1%)

Query: 19  LSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--IDQKISFVASGKEYLSKEVGSFIST 76
           L  + +N++N +TVGF++   +F+++          +Q        +       G+  ST
Sbjct: 17  LDVIGNNIANANTVGFKSGAAQFADMYANSVATAVGNQVGIGTKLSEVQQQFSQGTITST 76

Query: 77  GTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQK 136
              LD A+ G+ +F L +   ++ +R+G F++  +G + +A G   +   A+    I   
Sbjct: 77  NQALDVAINGNGFFQLSNNGSLVYSRNGVFQLDKNGFITNAQGLQLMGYAANSSGIINTA 136

Query: 137 DEIFNVGEKGEISQKGKVIATMGLY-SVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVK 195
             +        I+ K     + GL  +            +  + N         +     
Sbjct: 137 QTVPLSVPTANIAPKATTNISAGLNLNAQDPLMLGTPSVTASASNTGTLTSPGATITNTA 196

Query: 196 RG 197
            G
Sbjct: 197 SG 198



 Score = 66.4 bits (160), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 14/125 (11%), Positives = 35/125 (28%), Gaps = 5/125 (4%)

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                D  +                    +Q+   +  + L +     G V   N+    
Sbjct: 377 NSLQPDGYAAGTLTSFTIGADGTLTGNYSNQQTAALGQIVLANFSNQNGLVNLGNNEFQQ 436

Query: 180 NIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
                  +  +  +     ++ G +E+SN +   E+  +I   + + +    I   +   
Sbjct: 437 TSQSGVAQISAPGSTNHGVLQGGAVENSNVDLTSELVDLITAQRNYQANAQTIKTQQTVD 496

Query: 235 LEAIR 239
              I 
Sbjct: 497 QTLIN 501


>gi|218509412|ref|ZP_03507290.1| flagellar hook protein FlgE [Rhizobium etli Brasil 5]
          Length = 196

 Score = 73.0 bits (177), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 17/121 (14%), Positives = 35/121 (28%), Gaps = 1/121 (0%)

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178
                  +  V I               +   +  +        + +  G V   N    
Sbjct: 74  NGQAATPVKDVTIDGDGIVYAKYEDGSTKPLYRIPLANVASPDKLTLMSGNVYSANGQSG 133

Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
             +   P  +    T+K G LE SN +   E+ +MI   + + + + +       M   +
Sbjct: 134 VTVTGFPQTNG-LGTIKSGALEGSNVDLAGELTEMIEAQRSYTANSKVFQTGSDIMDVLV 192

Query: 239 R 239
            
Sbjct: 193 N 193


>gi|148258440|ref|YP_001243025.1| putative flagellar hook protein FlgE [Bradyrhizobium sp. BTAi1]
 gi|146410613|gb|ABQ39119.1| putative flagellar hook protein FlgE [Bradyrhizobium sp. BTAi1]
          Length = 466

 Score = 73.0 bits (177), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 58/133 (43%), Gaps = 8/133 (6%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +     +   A    ++ ++ N++NT T G++ +   FS+++ +         S VA  +
Sbjct: 6   ALLTAFSGMKAQSYAMANISGNIANTQTPGYKYVDTSFSDLISSQTRKQAVAGSVVAEAR 65

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRG-------IILTRDGRFKVTDDGSLVS 116
              S   G+  +TGT  + A+ G A+F+++   G        + TR G F +  DG L++
Sbjct: 66  FTNS-VQGALRATGTSTNMAINGPAFFSVQQKTGDSKFSGVPLYTRRGDFTIDKDGYLMN 124

Query: 117 ASGKYPVLDMASV 129
            +  Y        
Sbjct: 125 GADLYLFGTNLDP 137



 Score = 68.4 bits (165), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 15/124 (12%), Positives = 36/124 (29%), Gaps = 1/124 (0%)

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                D                       +     +A  G+ +                 
Sbjct: 343 NTLAQDGYPAGSLKSLSVTSEGTIVGTFTNDMTAAVAVAGVANFANPNALKPASGGSYEQ 402

Query: 180 NIPPTPLEDL-SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
                P     +G T+  G +E SN++   E  ++I   Q +++   ++  +++ M + +
Sbjct: 403 TRDSGPPIAGLNGATIVGGNVEASNSDVAGEFSKLIATQQAYSANVKVMTTSQQMMSDLL 462

Query: 239 RNIA 242
             I 
Sbjct: 463 NAIR 466


>gi|254227983|ref|ZP_04921413.1| Flagellar hook protein FlgE [Vibrio sp. Ex25]
 gi|262396035|ref|YP_003287888.1| flagellar hook protein FlgE [Vibrio sp. Ex25]
 gi|151939479|gb|EDN58307.1| Flagellar hook protein FlgE [Vibrio sp. Ex25]
 gi|262339629|gb|ACY53423.1| flagellar hook protein FlgE [Vibrio sp. Ex25]
          Length = 398

 Score = 73.0 bits (177), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 52/132 (39%), Gaps = 6/132 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SFNI L+   A    L+T++ N++N  T GF+  + +FS V      +  Q      +  
Sbjct: 2   SFNIALSGLDATNTELNTISHNIANASTYGFKGGRTEFSAVY-----NGMQPGGVEVASI 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122
                + GS   TG  +D A+ G  +F  +      + TR G F    D  + + SG   
Sbjct: 57  SQNFDKDGSISGTGRAMDLAINGGGFFVTKDNMGQTLYTRSGVFATDKDNFVTANSGAKL 116

Query: 123 VLDMASVPIQIP 134
                     + 
Sbjct: 117 QGYSVDSNNNLM 128



 Score = 69.1 bits (167), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 16/134 (11%), Positives = 43/134 (32%), Gaps = 9/134 (6%)

Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172
             VS +            +++     ++     G+   +G+V+    L     +QG  + 
Sbjct: 269 FGVSTNSPNGYTSGELAGVRVEGNGMVYATYTNGQSQLQGQVV----LADFANTQGLAKV 324

Query: 173 ENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
             +  + +            +     +  G LE SN +   E+  ++   + + +    I
Sbjct: 325 SGTAWTQSFSSGAPITGVPGSGTLGDLTPGALEGSNVDLTSELVALMTAQRNYQANAKTI 384

Query: 228 DENEKSMLEAIRNI 241
             ++K        +
Sbjct: 385 STSDKLTQALFNAV 398


>gi|218663526|ref|ZP_03519456.1| flagellar hook protein FlgE [Rhizobium etli IE4771]
          Length = 384

 Score = 73.0 bits (177), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 27/73 (36%), Gaps = 1/73 (1%)

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
            G V   N      +   P  +    +++ G LE SN +   E+ +MI   + + + + +
Sbjct: 310 SGNVYTANGQSGVTVTGFPQTNG-LGSIQSGALESSNVDLAGELTEMIEAQRSYTANSKV 368

Query: 227 IDENEKSMLEAIR 239
                  M   + 
Sbjct: 369 FQTGSDIMDVLVN 381


>gi|213028802|ref|ZP_03343249.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 293

 Score = 73.0 bits (177), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 15/147 (10%), Positives = 45/147 (30%), Gaps = 5/147 (3%)

Query: 98  IILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157
              T    F  +   +  + +      +       +  +            +++ +V+  
Sbjct: 145 TAATFSLSFLNSMQQNTGANNIVATNQNGYKPGDLVSYQINNDGTVVGNYSNEQEQVLGQ 204

Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQ 212
           + L +   ++G   + ++  +                +   +  G LE SN +   E+  
Sbjct: 205 IVLANFANNEGLASQGDNVWAATQASGVALLGTAGSGNFGKLTNGALEASNVDLSKELVN 264

Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIR 239
           MI   + + S    I   ++ +   + 
Sbjct: 265 MIVAQRNYQSNAQTIKTQDQILNTLVN 291


>gi|299131804|ref|ZP_07024999.1| fagellar hook-basal body protein [Afipia sp. 1NLS2]
 gi|298591941|gb|EFI52141.1| fagellar hook-basal body protein [Afipia sp. 1NLS2]
          Length = 604

 Score = 73.0 bits (177), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 15/123 (12%), Positives = 36/123 (29%)

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                D                       + +   +A + L + +      R +      
Sbjct: 482 NQIQNDGFPAGQLQTVSISNNGRVVGNYSNGRNIDLAAITLATFNGPNFLKRVDGGAFEV 541

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
                      G T+    LE SN +   E  ++I   Q +++ T +I  + + + + + 
Sbjct: 542 TDESGQALFGKGGTIVGSSLEGSNTDIADEFTKLIVTQQAYSANTKVITTSNQMVQDLLN 601

Query: 240 NIA 242
            + 
Sbjct: 602 VLR 604



 Score = 69.9 bits (169), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 51/139 (36%), Gaps = 12/139 (8%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +    +A   +    L  ++ N++N+ T  F+ I   F +++     +  Q    V+S  
Sbjct: 6   ALTTSVAGLRSQSYALENISGNIANSQTTAFKRIDTSFLDLIPDTGANA-QLAGSVSSSS 64

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRG-----------IILTRDGRFKVTDDG 112
              +   G   +       A+ GD +FA++ P                TR G F +  +G
Sbjct: 65  RETNTVQGDVQAASVATYMAINGDGFFAVQKPGSFTDNNPVFDGVDRYTRRGDFTLDKNG 124

Query: 113 SLVSASGKYPVLDMASVPI 131
            LV+ +G Y          
Sbjct: 125 YLVNGAGYYLEGIPIDPTT 143


>gi|260779347|ref|ZP_05888239.1| flagellar hook protein FlgE [Vibrio coralliilyticus ATCC BAA-450]
 gi|260605511|gb|EEX31806.1| flagellar hook protein FlgE [Vibrio coralliilyticus ATCC BAA-450]
          Length = 362

 Score = 73.0 bits (177), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 54/131 (41%), Gaps = 6/131 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SFNI L+   A    L+T++ N++N  T GF+  + +F+ V      +  Q      +  
Sbjct: 2   SFNIALSGLDATNTELNTISHNIANASTYGFKGARTEFAAVY-----NGMQPGGVEVASI 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGKYP 122
                + GS   TG  +D A+ G+ +F  +   G  + TR G F    D  ++  +G   
Sbjct: 57  SQNFDKNGSVSGTGRAMDLAINGNGFFVTKDSAGQLLYTRSGVFGTDKDNYVIGNTGAKL 116

Query: 123 VLDMASVPIQI 133
                     +
Sbjct: 117 QGYSVDGNNNL 127


>gi|238785497|ref|ZP_04629480.1| Flagellar hook protein FlgE [Yersinia bercovieri ATCC 43970]
 gi|238713599|gb|EEQ05628.1| Flagellar hook protein FlgE [Yersinia bercovieri ATCC 43970]
          Length = 419

 Score = 73.0 bits (177), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 56/134 (41%), Gaps = 6/134 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
            F+  ++   A    L  + +N++N+ T GF+   V F+++         Q    V    
Sbjct: 2   GFSQAVSGLNAASSNLDVIGNNIANSATSGFKAGSVSFADMFA-----GSQTGMGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +T   LD A+  + +F ++    GI   R+G+FK+  D ++++  G   
Sbjct: 57  ITQDFNDGTATTTNRRLDLAISQNGFFRMQDSSGGIFYARNGQFKLDADRNIINMQGLSL 116

Query: 123 VLDMASVPIQIPQK 136
               A+      Q+
Sbjct: 117 TGYPATGTPPTIQQ 130



 Score = 67.2 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 12/123 (9%), Positives = 35/123 (28%), Gaps = 5/123 (4%)

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
                 +       +            + + +++  + + +    +G     ++     +
Sbjct: 295 QNQTGYAAGEFTGFQINNDGSVVGTYSNSQTQLLGQIVMANFANPEGLSSEGDNVWKETL 354

Query: 182 PPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                           T+  G LE SN +   E+  MI   + + S    I   ++ +  
Sbjct: 355 ASGNPMLGTAGGGGFGTLTSGALESSNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILQT 414

Query: 237 AIR 239
            + 
Sbjct: 415 LVN 417


>gi|170751911|ref|YP_001758171.1| hypothetical protein Mrad2831_5543 [Methylobacterium radiotolerans
           JCM 2831]
 gi|170658433|gb|ACB27488.1| protein of unknown function DUF1078 domain protein
           [Methylobacterium radiotolerans JCM 2831]
          Length = 461

 Score = 73.0 bits (177), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 67/211 (31%), Gaps = 22/211 (10%)

Query: 1   MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
           M   ++    ++   +    +S ++ N++N+ T G++ I   F +++     D  +    
Sbjct: 1   MDLFSALQTSVSGLQSQSYAISNISGNIANSQTTGYKRIDTSFVDLMSEKTPD-REIAGS 59

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-----------LTRDGRFK 107
           V +  +  +   G+ +S+    + A+ G  +F +    G              TR G F 
Sbjct: 60  VLAKSQLTNTLAGNIVSSSVPTNMAINGQGFFTVVQKTGDANGATTFGGTDLYTRRGDFA 119

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
              DG LV+ +G Y                        G I      +      ++  + 
Sbjct: 120 QDKDGYLVNGAGGYLTGSNLDPIT--------GQTTSIGPIKIGNATLPAQATTTITYAA 171

Query: 168 GFVRRENSGISPNIPPTPLEDLSGVTVKRGF 198
                 ++  S           +   V  G 
Sbjct: 172 NLPSTPSTSASATSGSDLYNQNTAAVVTSGS 202



 Score = 65.3 bits (157), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 16/89 (17%), Positives = 33/89 (37%), Gaps = 1/89 (1%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFL-EDSNANSMYEMGQM 213
           +A++G+     + G     N      +   P       +   G   E SN +   E  +M
Sbjct: 373 LASVGVVQFANADGLKADTNGNYLQTVDSGPPLSGLNGSTISGASNEQSNTDIASEFSKM 432

Query: 214 IHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           I   Q +++ T ++   +  M + +  I 
Sbjct: 433 IVTQQAYSANTRVMSTAQTMMSDLLNVIR 461


>gi|27378811|ref|NP_770340.1| flagellar hook protein FlgE [Bradyrhizobium japonicum USDA 110]
 gi|27351960|dbj|BAC48965.1| flgE [Bradyrhizobium japonicum USDA 110]
          Length = 421

 Score = 73.0 bits (177), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 62/168 (36%), Gaps = 3/168 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           + +  ++A  A  Q LS ++DN++N+DT G++T    F  +V A  N        V    
Sbjct: 6   ALSSAISALSAQSQSLSMISDNIANSDTTGYKTTSAMFDALVTASSNATSYASGGVTVSG 65

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWF---ALESPRGIILTRDGRFKVTDDGSLVSASGK 120
                + G   +T    D A++G  +F      S   I  TR+G F + + G L +    
Sbjct: 66  RANITQQGLLAATSNATDVAIQGSGFFAVSNSTSGGTISYTRNGAFTINNAGYLENNGNY 125

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
                  +    +  +          +++       T    + ++   
Sbjct: 126 LEGWRTDADGNVVGNESASNLTAINTQVASTSGSATTKTTVAANLPSD 173



 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/101 (13%), Positives = 32/101 (31%), Gaps = 5/101 (4%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLED 201
             + +   I  + + +     G   R +   S  +           +    T+    LE 
Sbjct: 321 YSNGQTIAIYKIAVATFADPNGLSARSDGIYSATVTSGNAALQASGENGAGTIYGSELES 380

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  ++  +   MI   Q +++ + +I    K     I  + 
Sbjct: 381 STTDTSSQFSSMISAQQAYSAASQVISTVNKMYDTLISAMR 421


>gi|315931307|gb|EFV10276.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni
           327]
          Length = 847

 Score = 73.0 bits (177), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 17/144 (11%), Positives = 46/144 (31%), Gaps = 5/144 (3%)

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           T      +    S  + +G+      +        + +          + K   +A + +
Sbjct: 701 TSGSNDGLVSSNSASTLTGQATDGYTSGNLKPDAIRVDDKGNILGEFTNGKTFAVAKIAM 760

Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIH 215
            SV  + G      +          +      T     +K   LE SN +    + ++I 
Sbjct: 761 ASVANNSGLEEIGGNLFKVTANSGNIVVGEAGTGGRGEMKTSALEMSNVDLSRSLTELII 820

Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239
           + + + + +  I  +++ +   I+
Sbjct: 821 IQRGYQANSKTISTSDQMLQTLIQ 844



 Score = 72.6 bits (176), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 52/165 (31%), Gaps = 14/165 (8%)

Query: 19  LSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------KNDIDQKISFVASGKEYL 66
           +    +N+SN +T GF+  +  F  +                 ++  Q    V+      
Sbjct: 1   MDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATAPTDGRGGSNPLQIGLGVSVSSTTR 60

Query: 67  SKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRFKVTDDGSLVSASGKYPVL 124
               GS  +T    D A+ GD +F +         LTR G FK+   G+ V+ +G     
Sbjct: 61  IHSQGSVQTTDKNTDVAINGDGFFMVSDDGGLTNYLTRSGDFKLDAYGNFVNNAGFVVQG 120

Query: 125 DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169
              +   Q                       +T      +++ G 
Sbjct: 121 WNINWDDQTIDSSRTPQNIFIDPGMHIPAAKSTEVAIKANLNSGL 165


>gi|1272368|gb|AAA97476.1| LfgE [Vibrio parahaemolyticus]
          Length = 362

 Score = 73.0 bits (177), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 51/132 (38%), Gaps = 6/132 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SFNI L+   A    L+T++ N++N  T GF+  + +F+ V      +  Q      +  
Sbjct: 2   SFNIALSGLDATNTELNTISHNIANASTYGFKGARTEFAAVY-----NGMQPGGVEVASI 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122
                + GS   TG  +D A+ G  +F  +      + TR G F       + + +G   
Sbjct: 57  SQNFDKNGSITGTGRSMDLAINGSGFFVTKDHMGQTLYTRSGVFGTDKSNFVTANNGAKL 116

Query: 123 VLDMASVPIQIP 134
                     + 
Sbjct: 117 QGYSVDSNNNLM 128


>gi|226327746|ref|ZP_03803264.1| hypothetical protein PROPEN_01619 [Proteus penneri ATCC 35198]
 gi|225203450|gb|EEG85804.1| hypothetical protein PROPEN_01619 [Proteus penneri ATCC 35198]
          Length = 406

 Score = 72.6 bits (176), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 63/192 (32%), Gaps = 6/192 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SF+  ++   A    L T+ +N+SN+ T GF+   V F++V       +  K++ ++   
Sbjct: 2   SFSQAVSGLNAAAANLDTIGNNISNSATYGFKGASVSFADVFAGSGAGLGVKVAGIS--- 58

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
              + + GS  +T    D A+ G  +F   +   G+  +R+G F    +G L +  G   
Sbjct: 59  --QNFKDGSITTTNRPTDVAISGGGFFRIEDQNGGVFYSRNGEFGKDKNGFLTNMQGMRV 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
                          +          +      AT  +             +       P
Sbjct: 117 TGYPVQSVDGKNVVQKGATPTPIVIPTDMMNASATDKVDMTVNLNSAEEPIDQTTHAFNP 176

Query: 183 PTPLEDLSGVTV 194
                      V
Sbjct: 177 KDNDSYNFSTNV 188



 Score = 69.9 bits (169), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 15/121 (12%), Positives = 36/121 (29%), Gaps = 5/121 (4%)

Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183
            +          + E          +Q+ +V+  + L +   + G   + ++  S     
Sbjct: 284 QNGYQAGEFTNFRIEQDGSIMATYSNQQSQVVGQIALANFANAGGLSSQGDNMWSETNGS 343

Query: 184 TPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
                          +    LE SN +   E+  MI   + + S    I   ++ +   +
Sbjct: 344 GSPIVGVAGSGVFGKLTNNALEASNVDMSQELVNMIVAQRNYQSNAQTIKTQDQILQTLV 403

Query: 239 R 239
            
Sbjct: 404 S 404


>gi|99082779|ref|YP_614933.1| hypothetical protein TM1040_2939 [Ruegeria sp. TM1040]
 gi|99039059|gb|ABF65671.1| Flagellar hook protein flgE [Ruegeria sp. TM1040]
          Length = 422

 Score = 72.6 bits (176), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 34/140 (24%), Positives = 61/140 (43%), Gaps = 9/140 (6%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
           +S N G+A   A   RL+ ++DN++N+ T G++ +   F  +V +           V+  
Sbjct: 5   SSLNAGVAGLAANSTRLAAISDNIANSSTAGYKRVVTSFESMVISQSGGRYAAG-GVSVN 63

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALE--------SPRGIILTRDGRFKVTDDGSL 114
              +  E  S IST    D A+ G  +  +             ++LT  G F+  D+G L
Sbjct: 64  NTRMIDERSSLISTSNATDLAVAGRGFLPVASLAEVKAGEDPNMLLTTSGSFRTNDEGYL 123

Query: 115 VSASGKYPVLDMASVPIQIP 134
            ++SG   +   A+    +P
Sbjct: 124 TTSSGLVLLGWPANSDGTLP 143



 Score = 64.5 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 13/98 (13%), Positives = 33/98 (33%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLED 201
             +   +++  + L  +  + G    ++    P+                 TV     E+
Sbjct: 322 YENGSSRIVYQIPLADMPNANGMRSLDSQTFMPSPDSGAYYLWDAGAGPTGTVASYRQEE 381

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           S  +   E+  MI   + ++S   +I   ++ + E   
Sbjct: 382 SGTDVASELTTMIQTQRAYSSNAKVIQTVDEMLQETTN 419


>gi|332088750|gb|EGI93862.1| flagellar hook protein flgE [Shigella boydii 5216-82]
          Length = 401

 Score = 72.6 bits (176), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 73/195 (37%), Gaps = 6/195 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F+  ++   A    L  + +N++N+ T GF++    F+++         +    V    
Sbjct: 2   AFSQAVSGLNAAATNLYVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  +TG  LD A+  + +F  ++S   +  +R+G+FK+ ++ +LV+  G   
Sbjct: 57  ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
               A+      Q+                K   T  +     S   +   N+  + N  
Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPSVNAFDASNAD 176

Query: 183 PTPLEDLSGVTVKRG 197
               +    V   +G
Sbjct: 177 SYNKKGSVTVFDSQG 191



 Score = 72.2 bits (175), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             +       +  +            +++ +++  + L +   ++G     ++  S    
Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 337

Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                       +  T+  G LE SN +   E+  MI   + + S    I   ++ +   
Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397

Query: 238 IR 239
           + 
Sbjct: 398 VN 399


>gi|163735543|ref|ZP_02142975.1| flagellar hook protein FlgE, putative [Roseobacter litoralis Och
           149]
 gi|161391163|gb|EDQ15500.1| flagellar hook protein FlgE, putative [Roseobacter litoralis Och
           149]
          Length = 416

 Score = 72.6 bits (176), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 15/123 (12%), Positives = 39/123 (31%), Gaps = 5/123 (4%)

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
              D +++   +    +          + + + I  + L +V    G    ++    P+ 
Sbjct: 291 VTKDGSAIGNFVGVDVDPNGFVRASFDTGEIRTIYQIPLINVPNPNGLQAFDSQTYLPSR 350

Query: 182 PP-----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                      D     +     E+S  +   E+  MI   + ++S   +I   ++ + E
Sbjct: 351 QSGAFFLWNAGDGPTGDIVSFAREESTTDVAGELTDMIKTQRAYSSNAKVIQTVDEMLQE 410

Query: 237 AIR 239
              
Sbjct: 411 TTN 413



 Score = 56.8 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/149 (20%), Positives = 58/149 (38%), Gaps = 10/149 (6%)

Query: 19  LSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGT 78
           +++++DN++N+ T G++ ++  F  +V +           V +  + L  E G+ +ST  
Sbjct: 1   MASISDNIANSSTFGYKRVQTDFESMVLSSGG-GSYAAGGVRANTQRLIDERGTLVSTSN 59

Query: 79  ELDFALEGDAWFALES---------PRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASV 129
             D A+ G     +              + LT  G F+   +G L S SG   +   A+ 
Sbjct: 60  STDLAVRGGGMLPVAQSAQVQTAGADAPMFLTTTGSFRTDAEGYLTSQSGLVLMGWPAAA 119

Query: 130 PIQIPQKDEIFNVGEKGEISQKGKVIATM 158
              IP        G +      G++    
Sbjct: 120 DGSIPVYPRDTADGLEPVRIATGQLAGNP 148


>gi|254511352|ref|ZP_05123419.1| flagellar hook protein FlgE [Rhodobacteraceae bacterium KLH11]
 gi|221535063|gb|EEE38051.1| flagellar hook protein FlgE [Rhodobacteraceae bacterium KLH11]
          Length = 439

 Score = 72.6 bits (176), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 8/139 (5%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
           +S N G+AA  A   RL+T++DN++N+ T G++ ++  F  +V + +         V + 
Sbjct: 13  SSLNAGVAALKANANRLATISDNIANSSTFGYKRVETDFHSMVTSGQGGSYSAG-GVRTT 71

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-------LTRDGRFKVTDDGSLV 115
            + L  + GS ++T    D A+ G     +     I        LT  G F+  ++G LV
Sbjct: 72  SQRLIDQRGSLVTTNNSTDLAVRGRGMLPVRPSSQIAAGSNEMMLTTTGSFRTNEEGYLV 131

Query: 116 SASGKYPVLDMASVPIQIP 134
           + SG   +   A+    IP
Sbjct: 132 TQSGLVLLGWRAAADGSIP 150



 Score = 67.2 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 14/120 (11%), Positives = 38/120 (31%), Gaps = 5/120 (4%)

Query: 125 DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP- 183
           D ++V      + +          +   + +  + L  V    G    ++   +P+    
Sbjct: 317 DGSAVGTMTSVQVDENGYVYAFYDTGVSRRMFQIPLADVPNPNGLTALDSQTYAPSRDSG 376

Query: 184 ----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
                   +     +     E+S  +   E+  MI   + ++S   +I   ++ + E   
Sbjct: 377 TFFLWNAGEGPTGDLVSFAREESTTDVATELTSMIQTQRAYSSSAKVIQTVDEMLQETTN 436


>gi|163738039|ref|ZP_02145455.1| S-adenosyl-L-homocysteine hydrolase [Phaeobacter gallaeciensis
           BS107]
 gi|161388655|gb|EDQ13008.1| S-adenosyl-L-homocysteine hydrolase [Phaeobacter gallaeciensis
           BS107]
          Length = 440

 Score = 72.6 bits (176), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 33/143 (23%), Positives = 58/143 (40%), Gaps = 10/143 (6%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
           +S N G+A   A   RL++++DN++N  T G++ ++  F  +V +           V + 
Sbjct: 12  SSLNAGVAGLSANASRLASISDNIANASTPGYKRVQTDFHSMVMSSSGGAYSAG-GVRTT 70

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFAL---------ESPRGIILTRDGRFKVTDDGS 113
              L  E G  ++T    D A+ G     +          +   ++LT    F+   DG 
Sbjct: 71  NVRLIDERGPLVTTSNATDLAVRGRGMLPVASINEVETGATNPQMMLTTTASFRTNADGL 130

Query: 114 LVSASGKYPVLDMASVPIQIPQK 136
           L + SG   +   A     IP  
Sbjct: 131 LATESGLVLMGWPAQSDGTIPPY 153



 Score = 68.0 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 15/120 (12%), Positives = 37/120 (30%), Gaps = 5/120 (4%)

Query: 125 DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP- 183
           D A V      + +          +   +V+  + L  +    G +  +     P+    
Sbjct: 318 DGAPVGNFTGVEIDEAGFVHANYDTGVSRVVYQVPLVDLPNPNGMIAMDRQTYMPSSESG 377

Query: 184 ----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
                   +     +     E+S  +   E+  MI   + ++S   +I   ++ + E   
Sbjct: 378 SYFLWNAGEGPTGDILGYAREESATDVAGELTNMIQTQRAYSSNAKVIQTVDEMLQETTN 437


>gi|163744346|ref|ZP_02151706.1| flagellar hook protein FlgE [Oceanibulbus indolifex HEL-45]
 gi|161381164|gb|EDQ05573.1| flagellar hook protein FlgE [Oceanibulbus indolifex HEL-45]
          Length = 422

 Score = 72.6 bits (176), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 57/162 (35%), Gaps = 12/162 (7%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
           ++  IG++   A   R+  ++ N++N +TVG+R    +F      +  +     + V + 
Sbjct: 5   SALQIGVSGLQANSSRVQNISSNIANANTVGYRRTFSEF------VTQNTGSTQAGVLTD 58

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWF------ALESPRGIILTRDGRFKVTDDGSLVS 116
                   G+ + T +  D A++GD +F               LTR G F    +G L +
Sbjct: 59  VRANISTNGNIVGTNSTTDLAVQGDGFFVVSRNANDPIESNYYLTRAGSFTPDQNGDLRN 118

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158
           ++G +                               +V  T 
Sbjct: 119 SAGYFLSGFPTDAAGNTGSVSSTSYNDLSTVNIASYQVQGTP 160



 Score = 72.2 bits (175), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 10/83 (12%), Positives = 29/83 (34%), Gaps = 5/83 (6%)

Query: 162 SVDMSQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHL 216
           +V         + +          +   +       ++    LE SN +   E+  +I  
Sbjct: 337 NVANPDQMRSVDGNAYVATRDSGAVSLGNPMLNGLGSINSNALEGSNVDIAQELTDLIQT 396

Query: 217 TQKFNSITTLIDENEKSMLEAIR 239
            + ++S   +I  +++ + E + 
Sbjct: 397 QRAYSSSAKIITTSDEMLSETLN 419


>gi|15895423|ref|NP_348772.1| flagellar hook protein FlgE [Clostridium acetobutylicum ATCC 824]
 gi|15025147|gb|AAK80112.1|AE007716_1 Flagellar hook protein FlgE [Clostridium acetobutylicum ATCC 824]
 gi|325509569|gb|ADZ21205.1| Flagellar hook protein FlgE [Clostridium acetobutylicum EA 2018]
          Length = 423

 Score = 72.6 bits (176), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 16/130 (12%), Positives = 36/130 (27%), Gaps = 1/130 (0%)

Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ-GF 169
            G  +   G             I Q          G   + G  +         M + G 
Sbjct: 291 KGFSIGQDGVITANLDNGSAAAIGQIAMSSFTNAGGLEKEGGNYVKPSASSGQPMVRSGA 350

Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
              +      +             +  G LE SN +   +   MI  ++ + +   +I  
Sbjct: 351 YSNKLDPTFISSAKKEDNSGGYGKMYSGALEMSNVDLAQQFSDMIVASRAYQANGKIITT 410

Query: 230 NEKSMLEAIR 239
           +++ + + + 
Sbjct: 411 SDEILQDLVN 420



 Score = 68.0 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/186 (18%), Positives = 63/186 (33%), Gaps = 38/186 (20%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53
           M  +   G++     + +L  V  N++N+ T  +++  + FS+ +               
Sbjct: 1   MLRAMTSGISGLKVNQNKLDIVGSNIANSSTTAYKSQSINFSDAISETIKGASGATANYG 60

Query: 54  -----QKISFVASGKEYLSKEVGSFISTGTELDFAL-EGDAWFA---------------- 91
                Q    V S     +   GS  +TG  LD A+ +GD +F                 
Sbjct: 61  GVNPEQITLGVNSSAIITNTASGSVNTTGRNLDVAITDGDGYFMVASGANMADESECINV 120

Query: 92  ---------LESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNV 142
                      S   I  TRDG F + ++G+LV+A G+  +         + +       
Sbjct: 121 STTDHSITSTPSGTDISYTRDGSFNLDNEGNLVTADGRKVLGYSMVGRNTLYEDSADKTK 180

Query: 143 GEKGEI 148
              G  
Sbjct: 181 NIYGNF 186


>gi|32490790|ref|NP_871044.1| hypothetical protein WGLp041 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|25165996|dbj|BAC24187.1| flgE [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 410

 Score = 72.6 bits (176), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 32/130 (24%), Positives = 59/130 (45%), Gaps = 6/130 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SF  G+    +  Q L  + +N++N+ T+GF++  V FS++       +  ++S V    
Sbjct: 2   SFIQGINGINSAAQALDVIGNNIANSQTIGFKSSYVSFSDIFSGSMVGLGSQLSNV---- 57

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
              +   GS ++    LD A+ G+ +F   +S   I  TR+G FK+     +V+   K+ 
Sbjct: 58  -TQNFASGSMVTGSKNLDMAISGNGFFRLSDSGGKIYFTRNGEFKLNSHRQIVNLQNKFL 116

Query: 123 VLDMASVPIQ 132
               A     
Sbjct: 117 TGYQARGNPP 126



 Score = 68.7 bits (166), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 16/129 (12%), Positives = 38/129 (29%), Gaps = 5/129 (3%)

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
                Y  ++   V                   + + ++IA + + +   + G      +
Sbjct: 280 DNQINYQKINGHGVGKFNDYNVSDSGKIIANYSNGQTQLIAQIAMANFTNNLGLTPNGEN 339

Query: 176 GISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
               +    P      E  S   +    LE SN +   E+ +M+     + S    I   
Sbjct: 340 CWLESAESGPAIIGLSETGSFGRISGQKLESSNVDISNELVKMMTQQSNYQSNAQTIKTQ 399

Query: 231 EKSMLEAIR 239
           ++ +   + 
Sbjct: 400 DQLLQILVN 408


>gi|227112521|ref|ZP_03826177.1| flagellar hook protein FlgE [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 400

 Score = 72.6 bits (176), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 56/133 (42%), Gaps = 7/133 (5%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
            F+  ++   A    L  + +N++N+ TVGF++  V F+++         +    V    
Sbjct: 2   GFSQAVSGLNAASNNLDVIGNNIANSATVGFKSGTVTFADMFA-----GSKVGMGVKVAS 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  S+  +LD A+ G  ++   ++      +R+G+F +    ++V+A G   
Sbjct: 57  VLQDFGNGTVTSSSRDLDIAISGGGFYRLQDTNGSTYYSRNGQFMLNGR-NIVNAQGMQL 115

Query: 123 VLDMASVPIQIPQ 135
                +    + Q
Sbjct: 116 TGYPVAGTPPVVQ 128



 Score = 69.9 bits (169), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 17/123 (13%), Positives = 34/123 (27%), Gaps = 5/123 (4%)

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
           P  +  +               E    + + + +  + L S    +G     ++  S   
Sbjct: 276 PTQNGFAPGSLTGFAINDDGTIEGSYSNGQKQPLGQILLASFANPEGLSPEGDNAWSETA 335

Query: 182 PPTPLEDLSGVTVKRGFL-----EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                      T   G L     E SN +   E+  MI   + + S    I   +  +  
Sbjct: 336 SSGQAVVGLAGTGSLGKLIGKSTESSNVDLSKELVNMIVAQRNYQSNAQTIKTQDSILQT 395

Query: 237 AIR 239
            + 
Sbjct: 396 LVS 398


>gi|28900122|ref|NP_799777.1| flagellar hook protein FlgE [Vibrio parahaemolyticus RIMD 2210633]
 gi|153837072|ref|ZP_01989739.1| flagellar hook protein FlgE [Vibrio parahaemolyticus AQ3810]
 gi|260365772|ref|ZP_05778268.1| flagellar hook protein FlgE [Vibrio parahaemolyticus K5030]
 gi|260880694|ref|ZP_05893049.1| flagellar hook protein FlgE [Vibrio parahaemolyticus AN-5034]
 gi|260897700|ref|ZP_05906196.1| flagellar hook protein FlgE [Vibrio parahaemolyticus Peru-466]
 gi|260899389|ref|ZP_05907784.1| flagellar hook protein FlgE [Vibrio parahaemolyticus AQ4037]
 gi|28808405|dbj|BAC61610.1| LfgE [Vibrio parahaemolyticus RIMD 2210633]
 gi|149749660|gb|EDM60405.1| flagellar hook protein FlgE [Vibrio parahaemolyticus AQ3810]
 gi|308086228|gb|EFO35923.1| flagellar hook protein FlgE [Vibrio parahaemolyticus Peru-466]
 gi|308092098|gb|EFO41793.1| flagellar hook protein FlgE [Vibrio parahaemolyticus AN-5034]
 gi|308109176|gb|EFO46716.1| flagellar hook protein FlgE [Vibrio parahaemolyticus AQ4037]
 gi|308114990|gb|EFO52530.1| flagellar hook protein FlgE [Vibrio parahaemolyticus K5030]
 gi|328470101|gb|EGF41012.1| flagellar hook protein FlgE [Vibrio parahaemolyticus 10329]
          Length = 398

 Score = 72.6 bits (176), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 51/132 (38%), Gaps = 6/132 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SFNI L+   A    L+T++ N++N  T GF+  + +F+ V      +  Q      +  
Sbjct: 2   SFNIALSGLDATNTELNTISHNIANASTYGFKGARTEFAAVY-----NGMQPGGVEVASI 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122
                + GS   TG  +D A+ G  +F  +      + TR G F       + + +G   
Sbjct: 57  SQNFDKNGSITGTGRSMDLAINGSGFFVTKDHMGQTLYTRSGVFGTDKSNFVTANNGAKL 116

Query: 123 VLDMASVPIQIP 134
                     + 
Sbjct: 117 QGYSVDSNNNLM 128



 Score = 68.7 bits (166), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 16/134 (11%), Positives = 43/134 (32%), Gaps = 9/134 (6%)

Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172
             VS +            +++     ++     G+   +G+V+    L     +QG  + 
Sbjct: 269 FGVSTNSPNGYTSGELAGVRVEDNGMVYATYTNGQSQLQGQVV----LADFANTQGLAKV 324

Query: 173 ENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
             +  + +            +     +  G LE SN +   E+  ++   + + +    I
Sbjct: 325 SGTAWTQSFSSGAPIMGVPGSGTLGNLTPGALEGSNVDLTSELVALMTAQRNYQANAKTI 384

Query: 228 DENEKSMLEAIRNI 241
             ++K        +
Sbjct: 385 STSDKLTQALFNAV 398


>gi|110677963|ref|YP_680970.1| flagellar hook protein FlgE, putative [Roseobacter denitrificans
           OCh 114]
 gi|109454079|gb|ABG30284.1| flagellar hook protein FlgE, putative [Roseobacter denitrificans
           OCh 114]
          Length = 436

 Score = 72.6 bits (176), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 15/123 (12%), Positives = 39/123 (31%), Gaps = 5/123 (4%)

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
              D +++   +    +          + + + I  + L +V    G    ++    P+ 
Sbjct: 311 VTKDGSAIGNFVGVDVDPNGFVRASFDTGEIRTIYQIPLINVPNPNGLQAFDSQTYLPSR 370

Query: 182 PP-----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                      D     +     E+S  +   E+  MI   + ++S   +I   ++ + E
Sbjct: 371 QSGAFFLWNAGDGPTGDIVSFAREESTTDVAGELTDMIKTQRAYSSNAKVIQTVDEMLQE 430

Query: 237 AIR 239
              
Sbjct: 431 TTN 433



 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/165 (23%), Positives = 66/165 (40%), Gaps = 10/165 (6%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
           +S N G+A      QRL++++DN++N+ T G++ ++  F  +V +           V + 
Sbjct: 5   SSLNAGVAGLQTNSQRLASISDNIANSSTFGYKRVQTDFESMVLSSGG-GAYAAGGVRAN 63

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI---------ILTRDGRFKVTDDGS 113
            + L  E G+ +ST    D A+ G     +     +          LT  G F+   DG 
Sbjct: 64  TQRLIDERGTLVSTSNSTDLAVRGGGMLPVAQAAQVQTAGTDAPMFLTTTGSFRPDADGY 123

Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158
           L S SG   +   A+    IP        G +      G++    
Sbjct: 124 LTSQSGLVLMGWPAAADGSIPVYPRDTADGLEPIRIATGQLAGNP 168


>gi|283834455|ref|ZP_06354196.1| flagellar hook protein FlgE [Citrobacter youngae ATCC 29220]
 gi|291070002|gb|EFE08111.1| flagellar hook protein FlgE [Citrobacter youngae ATCC 29220]
          Length = 400

 Score = 72.6 bits (176), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 36/146 (24%), Positives = 64/146 (43%), Gaps = 6/146 (4%)

Query: 7   IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66
           I      A+ ++L  +++N++N+ TVG++++  +FS +         Q +    +G    
Sbjct: 5   IAATGLNAVNEQLDGISNNIANSGTVGYKSMTTQFSAMYA-----GTQAMGVSVAGSAQS 59

Query: 67  SKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125
               GS +STG  LD A+  D +F + +S   I  TR G F    +G +V+ASG Y    
Sbjct: 60  ISTGGSMVSTGNALDLAINDDGFFVMCDSAGNISYTRAGSFVTDKNGYIVNASGDYLQGY 119

Query: 126 MASVPIQIPQKDEIFNVGEKGEISQK 151
                  +          + G I  +
Sbjct: 120 PVDDSGTLQTGTVTDIQIKTGNIPAQ 145



 Score = 68.7 bits (166), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 57/194 (29%), Gaps = 10/194 (5%)

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD-GRFKVTDDG 112
           Q      +     +  +    +TG   D        F  +    I +T D          
Sbjct: 211 QYTFDGEAQSGVPATTLTFDPNTGKLTDPTTPQTITFTTDEAAPISMTVDYSDCTQYGSD 270

Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172
             V+ +            +Q+    +++     GE   +G+V+    L +     G    
Sbjct: 271 FSVTTNSATGYASATQNGVQVDDDGKVYATYSNGERMLQGQVV----LATFPDENGLQAV 326

Query: 173 ENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
             +              +       T+  G LE SN +   E+  ++   + + + T +I
Sbjct: 327 SGTAWVQTGESGTPLIGTPGSGSCGTLSSGMLESSNVDITNELVNLMTAQRNYQANTKVI 386

Query: 228 DENEKSMLEAIRNI 241
             + +      + +
Sbjct: 387 STSTQLDQALFQAM 400


>gi|242280400|ref|YP_002992529.1| hypothetical protein Desal_2938 [Desulfovibrio salexigens DSM 2638]
 gi|242123294|gb|ACS80990.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           salexigens DSM 2638]
          Length = 528

 Score = 72.2 bits (175), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 60/208 (28%), Gaps = 16/208 (7%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN------------ 50
           +S         +    L  +  N++N +T  +++       +                  
Sbjct: 4   SSMYTAATGVKSHGVLLQQIGANLANVNTTAYKSGDTFLETLASQSSGKANSGIVSGGIS 63

Query: 51  DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI--ILTRDGRFKV 108
              Q           ++ + GSF +T +  D A+ G  +F +  P       TR G F  
Sbjct: 64  TPGQIGLGTRVATTRINFKEGSFETTNSSTDIAIGGQGFFRVADPVSNASRYTRAGSFHF 123

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
             +G LV +               I    +   +  K E    G  I  +          
Sbjct: 124 DKNGQLVDSHKNILQGYKIDDDGNIGSTSQNIVLPMKEETDTYGNKIMVVKSDPKGTDS- 182

Query: 169 FVRRENSGISPNIPPTPLEDLSGVTVKR 196
            V    +  S  +  +  ED    ++ +
Sbjct: 183 -VTMRTNLDSGAVDNSSSEDSPFFSLLQ 209



 Score = 71.8 bits (174), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 18/122 (14%), Positives = 33/122 (27%), Gaps = 5/122 (4%)

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
              D                +      +     +  + LY+     G  R  ++  S  I
Sbjct: 403 QSQDGFGEGYLQNVSFSPDGIMSALFSNGMSAELYQVNLYNFKNEFGLRREGSNYFSATI 462

Query: 182 PPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                           +V    LE SN +   E   MI   + F + +  I   +  +  
Sbjct: 463 DSGEAIQGVARKDGLGSVVSNSLETSNVDLADEFAYMILTQRGFQANSKGITTTDSMINT 522

Query: 237 AI 238
           A+
Sbjct: 523 AL 524


>gi|91224199|ref|ZP_01259462.1| flagellar hook protein E [Vibrio alginolyticus 12G01]
 gi|269965644|ref|ZP_06179757.1| Flagellar hook protein flgE [Vibrio alginolyticus 40B]
 gi|91191110|gb|EAS77376.1| flagellar hook protein E [Vibrio alginolyticus 12G01]
 gi|269829712|gb|EEZ83948.1| Flagellar hook protein flgE [Vibrio alginolyticus 40B]
          Length = 398

 Score = 72.2 bits (175), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 53/132 (40%), Gaps = 6/132 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SFNI L+   A    L+T++ N++N  T GF+  + +FS V      +  Q      +  
Sbjct: 2   SFNIALSGLDATNTELNTISHNIANASTYGFKGGRTEFSAVY-----NGMQPGGVEVASI 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLVSASGKYP 122
                + GS   TG  +D A+ G  +F  +   G +  TR G F    +  + + SG   
Sbjct: 57  SQNFDKDGSITGTGRAMDLAINGGGFFVTKDNMGQMLYTRSGVFSTDKNNFVTANSGAKL 116

Query: 123 VLDMASVPIQIP 134
                     + 
Sbjct: 117 QGYSVDSNNNLM 128



 Score = 68.4 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 16/134 (11%), Positives = 43/134 (32%), Gaps = 9/134 (6%)

Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172
             VS +            +++     ++     G+   +G+V+    L     +QG  + 
Sbjct: 269 FGVSTNSPNGYTSGELAGVRVEGNGMVYATYTNGQSQLQGQVV----LADFANTQGLAKV 324

Query: 173 ENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
             +  + +            +     +  G LE SN +   E+  ++   + + +    I
Sbjct: 325 SGTSWTQSFSSGAPIMGVPGSGTMGDLTPGALEGSNVDLTSELVALMTAQRNYQANAKTI 384

Query: 228 DENEKSMLEAIRNI 241
             ++K        +
Sbjct: 385 STSDKLTQALFNAV 398


>gi|209521589|ref|ZP_03270287.1| flagellar basal body FlaE domain protein [Burkholderia sp. H160]
 gi|209497972|gb|EDZ98129.1| flagellar basal body FlaE domain protein [Burkholderia sp. H160]
          Length = 502

 Score = 72.2 bits (175), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 65/177 (36%), Gaps = 2/177 (1%)

Query: 19  LSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGKEYLSKEVGSFIST 76
           L  + +N++N +TVGF++   +F+++           Q        +       G+  +T
Sbjct: 17  LDVIGNNIANANTVGFKSGTAEFADMYANSVATATSQQIGIGTQLSEVQQQFSQGTITTT 76

Query: 77  GTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQK 136
              L+ A+ G+ +F + +   +  +R+G F++  +G + +A G   +   A+    I   
Sbjct: 77  NQALNVAINGNGFFQMSNNGTLTYSRNGVFQLDKNGFITNAEGLDLMGYAANSSGIINTA 136

Query: 137 DEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT 193
             +        I+ +     T GL         +             +     + +T
Sbjct: 137 QTVPLTVPTANIAPQATTKITAGLNLNAQDNIMLGTPTVTAGATNTGSLTTTGATIT 193



 Score = 63.7 bits (153), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 12/98 (12%), Positives = 32/98 (32%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLED 201
             + +   +  + L +     G V   N+           +  +  +     ++ G +E+
Sbjct: 404 YSNGQTAALGQIVLANFSNQNGLVDLGNNEYGQTAASGVAQISTPGSTNHGVLQGGAVEN 463

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E+  +I   + + +    I   +      I 
Sbjct: 464 SNVDLTSELVNLITAQRNYQANAQTIKTQQAVDQTLIN 501


>gi|115523522|ref|YP_780433.1| flagellar basal body FlaE domain-containing protein
           [Rhodopseudomonas palustris BisA53]
 gi|115517469|gb|ABJ05453.1| flagellar basal body FlaE domain protein [Rhodopseudomonas
           palustris BisA53]
          Length = 602

 Score = 72.2 bits (175), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 49/132 (37%), Gaps = 12/132 (9%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +    +A   A    L  ++ N++N+ T  F+ I   F +++     +  Q    V    
Sbjct: 6   ALTTSVAGLRANSYALENISGNIANSQTTAFKRIDSSFLDLIPQTGVN-QQLAGSVTFAS 64

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRG-----------IILTRDGRFKVTDDG 112
              +   GS  +       A+ GD +F ++ P                TR G F +  +G
Sbjct: 65  RSTNTVQGSVSAASVSTFMAINGDGFFVVQKPGSFADNNPIFDGVNRYTRRGDFSLDKNG 124

Query: 113 SLVSASGKYPVL 124
            LV+ +G Y   
Sbjct: 125 YLVNGAGYYVQG 136



 Score = 69.1 bits (167), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 31/85 (36%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMI 214
           +A + + + + +    R +                 G T+    LE SN +   E  ++I
Sbjct: 515 LAEISIATFNGANFLKRTDGGVFEATNESGEALYGKGGTISGSSLEASNTDIADEFTKLI 574

Query: 215 HLTQKFNSITTLIDENEKSMLEAIR 239
              Q +++ T +I      + + + 
Sbjct: 575 VTQQAYSANTKVITTANTMVQDLLN 599


>gi|316932790|ref|YP_004107772.1| flagellar hook-basal body protein [Rhodopseudomonas palustris DX-1]
 gi|315600504|gb|ADU43039.1| flagellar hook-basal body protein [Rhodopseudomonas palustris DX-1]
          Length = 616

 Score = 72.2 bits (175), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 51/137 (37%), Gaps = 12/137 (8%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +    +A   A    L  ++ N++N+ T  F+ I   F +++    N+  Q    V +  
Sbjct: 6   ALTTSVAGLRANSYALENISGNIANSQTTAFKRIDTSFLDLIPQTGNN-QQLAGSVNAES 64

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRG-----------IILTRDGRFKVTDDG 112
              +   GS  S       A+ G+ +F ++ P                TR G F +  +G
Sbjct: 65  RLTNTLTGSVQSAAVSTYMAINGEGFFVVQKPASFTDNNPIFAGVNNYTRRGDFSLDKNG 124

Query: 113 SLVSASGKYPVLDMASV 129
            LV+ +G Y        
Sbjct: 125 YLVNGAGYYLQGVPIDP 141



 Score = 69.5 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 13/120 (10%), Positives = 36/120 (30%)

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                D  +    +               + +   +A + + + + +    R +      
Sbjct: 494 NQLKQDGYAAGQLVSVSVSNQGRVVGSYSNGRNIDLAEVSVATFNGANFLKRIDGGAFET 553

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
                      G ++    LE SN +   E  ++I   Q +++ T +I      + + + 
Sbjct: 554 TNESGEALFGKGGSISGASLESSNTDIADEFTKLIVTQQAYSANTKVITTANTMVQDLLN 613


>gi|114765247|ref|ZP_01444379.1| putative flagellar hook protein [Pelagibaca bermudensis HTCC2601]
 gi|114542382|gb|EAU45410.1| putative flagellar hook protein [Roseovarius sp. HTCC2601]
          Length = 433

 Score = 72.2 bits (175), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 24/203 (11%), Positives = 58/203 (28%), Gaps = 8/203 (3%)

Query: 45  VGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDG 104
            G +    +       +   Y    V +    G   D A               ++T   
Sbjct: 228 YGTVTMSFNDTGENAGAPAAYGDVTVTAAAPAGFAFDPATGEMTLTIDNGTEPQVVTMAL 287

Query: 105 RFKVTDDGSLVSASGKYPV---LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLY 161
               + +G    +    P+    + +        + + F        +   K + ++ L 
Sbjct: 288 GAPGSFEGLTQFSGDYTPMTVRPNGSESGTLTRVEFDEFGDVWGVFDNGTRKALYSIPLA 347

Query: 162 SVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
           +     G     NS    +                 T+  G +E +N +   E+  +I  
Sbjct: 348 TFANPNGLETSNNSTFHTSNTSGSYYLGQPGTGETGTMTSGGVESANVDIAEELTSLIQR 407

Query: 217 TQKFNSITTLIDENEKSMLEAIR 239
            + ++S   +I   ++ + E + 
Sbjct: 408 QRAYSSNAKIITTADEMLNETVN 430



 Score = 64.5 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 66/162 (40%), Gaps = 10/162 (6%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV-GAIKNDIDQKISFVAS 61
            +   G++  +A  + +  ++ N++N DTVG+R     FS++V     +      + VA+
Sbjct: 5   NAMASGVSGLMANSKAVEKISYNIANADTVGYRRS---FSQMVTSGSTSASGSFSTGVAT 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL------TRDGRFKVTDDGSLV 115
              + +   GSF+ T    +  + G  +F + S            TR G F+  +DG+LV
Sbjct: 62  EVTHSNTAEGSFMDTSVNSNLTITGSGFFVVNSNIDASYTAGNMFTRVGSFEPDEDGNLV 121

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157
           +A+G Y +         +   D       +        +  T
Sbjct: 122 NAAGLYLMGFGYGDDGTLGAVDRASFNDLEPVNIANQTISGT 163


>gi|307731363|ref|YP_003908587.1| fagellar hook-basal body protein [Burkholderia sp. CCGE1003]
 gi|307585898|gb|ADN59296.1| fagellar hook-basal body protein [Burkholderia sp. CCGE1003]
          Length = 502

 Score = 72.2 bits (175), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 68/182 (37%), Gaps = 3/182 (1%)

Query: 19  LSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--IDQKISFVASGKEYLSKEVGSFIST 76
           L  + +N++N +TVGF++   +F+++          +Q        +       G+  ST
Sbjct: 17  LDVIGNNIANANTVGFKSGAAQFADMYANSVATAVGNQVGIGTKLSEVQQQFSQGTITST 76

Query: 77  GTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQK 136
              LD A+ G+ +F L +   ++ +R+G F++  +G + +A G   +   A+    I   
Sbjct: 77  NQALDVAINGNGFFQLSNNGSLVYSRNGVFQLDKNGFITNAQGLQLMGYAANSSGIINTA 136

Query: 137 DEIFNVGEKGEISQKGKVIATMGLY-SVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVK 195
             +        I+ K     + GL  +            +  + N         +     
Sbjct: 137 QTVPLSVPTANIAPKATTNISAGLNLNAQDPLMLGTPSVTANASNTGTLTTPGATITNTA 196

Query: 196 RG 197
            G
Sbjct: 197 SG 198



 Score = 63.7 bits (153), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 13/125 (10%), Positives = 35/125 (28%), Gaps = 5/125 (4%)

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                D  +                    +Q+   +  + L +     G V   N+    
Sbjct: 377 NSLQPDGYAAGTLTSFTIGADGTLTGNYSNQQTAALGQIALANFSNQNGLVNLGNNVFQQ 436

Query: 180 NIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
                  +  +  +     ++ G +E+SN +   ++  +I   + + +    I   +   
Sbjct: 437 TSQSGVAQISAPGSTNHGVLQGGAVENSNVDLTSQLVDLITAQRNYQANAQTIKTQQTVD 496

Query: 235 LEAIR 239
              I 
Sbjct: 497 QTLIN 501


>gi|260222468|emb|CBA32062.1| hypothetical protein Csp_D30240 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 104

 Score = 72.2 bits (175), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 13/89 (14%), Positives = 26/89 (29%), Gaps = 5/89 (5%)

Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEM 210
             + +      QG  +                  S         + G LEDSN +   E+
Sbjct: 14  GQLLVADFRNVQGLTQIAGGNWIETSASGQPVLGSPGEGKFGKTRSGALEDSNVDLTGEL 73

Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             M+   + + +    I   ++ M   + 
Sbjct: 74  VNMMTAQRNYQANAQTIKTQDQIMSTLVN 102


>gi|255605341|ref|XP_002538377.1| Flagellar L-ring protein precursor, putative [Ricinus communis]
 gi|223512459|gb|EEF24006.1| Flagellar L-ring protein precursor, putative [Ricinus communis]
          Length = 334

 Score = 72.2 bits (175), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 28/82 (34%), Gaps = 5/82 (6%)

Query: 145 KGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS-----GVTVKRGFL 199
           +         I  + + S     G     ++ +        +   +       T+++G L
Sbjct: 24  QMPNQTDLTQIGQIQVASFPNPAGLQAVGDNYLIETPASGTVALGNAGIDGRGTIRQGML 83

Query: 200 EDSNANSMYEMGQMIHLTQKFN 221
           E SN N + E+  MI   + + 
Sbjct: 84  EGSNVNVVEELVDMIETQRAYE 105


>gi|218461124|ref|ZP_03501215.1| flagellar hook protein FlgE [Rhizobium etli Kim 5]
          Length = 91

 Score = 71.8 bits (174), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 15/87 (17%), Positives = 30/87 (34%), Gaps = 1/87 (1%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQ 212
            +        + +  G V   N      +   P  +    T+K G LE SN +   E+ +
Sbjct: 3   PLANVASPDKLTLMSGNVYSANGQSGVTVTGFPQTNG-LGTIKSGALEGSNVDLAGELTE 61

Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIR 239
           MI   + + + + +       M   + 
Sbjct: 62  MIESQRSYTANSKVFQTGSDIMDVLVN 88


>gi|296157456|ref|ZP_06840291.1| fagellar hook-basal body protein [Burkholderia sp. Ch1-1]
 gi|295892228|gb|EFG72011.1| fagellar hook-basal body protein [Burkholderia sp. Ch1-1]
          Length = 503

 Score = 71.8 bits (174), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 55/124 (44%), Gaps = 2/124 (1%)

Query: 19  LSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--IDQKISFVASGKEYLSKEVGSFIST 76
           L  + +N++N +TVGF++   +F+++          +Q                G+  ST
Sbjct: 17  LDVIGNNIANANTVGFKSGAAQFADMYANSVATAVGNQIGIGTKLADVQQQFSQGTITST 76

Query: 77  GTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQK 136
              LD A+ G+ +F L +   ++ +R+G F++  +G + +A G   +   A+    I   
Sbjct: 77  NQALDVAINGNGFFQLSNNGSLVYSRNGVFQLDKNGFITNAQGLQLMGYAANSSGIINTA 136

Query: 137 DEIF 140
             + 
Sbjct: 137 QTVP 140



 Score = 66.0 bits (159), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 14/125 (11%), Positives = 35/125 (28%), Gaps = 5/125 (4%)

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                D  +                    +Q+   +  + L +     G V   N+    
Sbjct: 378 NSLQPDGYAAGTLTSFTIGADGTLTGNYSNQQTAALGQIVLANFSNQNGLVNLGNNEFQQ 437

Query: 180 NIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
                  +  +  +     ++ G +E+SN +   E+  +I   + + +    I   +   
Sbjct: 438 TSQSGVAQISAPGSTNHGVLQGGAVENSNVDLTSELVDLITAQRNYQANAQTIKTQQTVD 497

Query: 235 LEAIR 239
              I 
Sbjct: 498 QTLIN 502


>gi|126734127|ref|ZP_01749874.1| flagellar hook protein FlgE, putative [Roseobacter sp. CCS2]
 gi|126716993|gb|EBA13857.1| flagellar hook protein FlgE, putative [Roseobacter sp. CCS2]
          Length = 444

 Score = 71.8 bits (174), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 62/181 (34%), Gaps = 11/181 (6%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
           +S N  +A   A   RL+T++DN+SN+ T G++     F  +V             V + 
Sbjct: 5   SSLNASVAGLAANATRLATISDNISNSSTYGYKRAVTDFQSMVIESGQGTYSAG-GVRTT 63

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALESP---------RGIILTRDGRFKVTDDGS 113
              L  E G+ +ST    D A+ G     + S            + LT  G F+    G 
Sbjct: 64  TSRLIDERGALVSTSNPTDLAVRGRGMLPVTSETSVTVDNGDNPLFLTTTGSFRPDAQGY 123

Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRE 173
           L S  G   +L + +            ++     +       A      VD+S       
Sbjct: 124 LRSP-GGLVLLGVPAAADGTIPNYPRDSIDGLVPVQINANQFAGEATTRVDLSVNLPATS 182

Query: 174 N 174
            
Sbjct: 183 T 183



 Score = 66.0 bits (159), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 12/93 (12%), Positives = 29/93 (31%), Gaps = 5/93 (5%)

Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLEDSNANS 206
            +V+  + L  V    G    +                   D     +     E+S  + 
Sbjct: 349 NRVLYQIPLVDVPNVNGLETLDQQSYRVTPDSGSFFLWDAGDGPTGDIVGFAREESATDV 408

Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             E+ ++I   + ++S   +I   ++ + E   
Sbjct: 409 AGELTELIQTQRAYSSNAKVIQTVDEMLQETTN 441


>gi|114762177|ref|ZP_01441645.1| flagellar hook protein FlgE, putative [Pelagibaca bermudensis
           HTCC2601]
 gi|114545201|gb|EAU48204.1| flagellar hook protein FlgE, putative [Roseovarius sp. HTCC2601]
          Length = 432

 Score = 71.8 bits (174), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 36/148 (24%), Positives = 66/148 (44%), Gaps = 8/148 (5%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
           +S N G++       RLS ++DN++N+ T G+R ++  F+ +V +  +         A  
Sbjct: 5   SSLNAGVSGLAGNASRLSAISDNIANSSTYGYRRVETDFTALVMSSGSQRAYTAGGTAID 64

Query: 63  KEYLSKEVGSFISTGTELDFALEG--------DAWFALESPRGIILTRDGRFKVTDDGSL 114
              L  E G+ +ST    D A++G         A +       ++LT  G F++ ++G L
Sbjct: 65  NLRLIDEGGAIVSTSNATDLAVDGIGMLPVASQAQYEATGEPELLLTSTGSFRIDENGYL 124

Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNV 142
            S +G Y +   A++   IP        
Sbjct: 125 ASENGYYLMGWPAALDGSIPPYPRDTIN 152



 Score = 67.6 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 43/120 (35%), Gaps = 5/120 (4%)

Query: 125 DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP- 183
           D +SV   +  + +          S + +V+  + L  +    G +  + S   P+    
Sbjct: 310 DGSSVGNMVSVEVDENGYVSALYDSGQSQVLYQIPLVDLPNYNGMIAVDGSTFRPSPESG 369

Query: 184 ----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
                   D    +VK    ++S  +   E+  MI   + ++S   +I   ++ + E   
Sbjct: 370 SFFLWDAGDGPTGSVKSYARQESATDIAQELTDMIRTQRAYSSNAKVIQTVDEMLQETTN 429


>gi|32265682|ref|NP_859714.1| flagellar hook protein FlgE [Helicobacter hepaticus ATCC 51449]
 gi|32261730|gb|AAP76780.1| flagellar hook protein FlgE [Helicobacter hepaticus ATCC 51449]
          Length = 745

 Score = 71.8 bits (174), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 54/150 (36%), Gaps = 22/150 (14%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-------D 53
           M  +     +     +  L ++++N++N +T+G+R    +F  +     + +       +
Sbjct: 1   MNGTLVNSYSGIKTHQFGLDSISNNIANVNTIGYRENIPQFETLFANNMDFLNADSPINN 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA---------------LESPRGI 98
                       +S   GS+ +T  E + A EG  WF                 E  +  
Sbjct: 61  DMNYGATKSSNAISTRSGSYKATDGEFNVAYEGKGWFIVGEQKSGSFEIKDDGYEKKQKN 120

Query: 99  ILTRDGRFKVTDDGSLVSASGKYPVLDMAS 128
             TRDG F    +G +V+ SG Y       
Sbjct: 121 YFTRDGSFLRDGEGYIVNTSGYYMYGVDLG 150



 Score = 65.3 bits (157), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 38/102 (37%), Gaps = 15/102 (14%)

Query: 153 KVIATMGLYSVDMSQGFVRRENS----------GISPNIPPTPLEDLSGVTVKRGF---- 198
           + +  +G+ +    QG  +   +          G +  I   P+    G+ +K G     
Sbjct: 641 EPMGRIGIAAFVNDQGLRKVGGNLFEMTEMVVNGNANTISGRPILGWEGLNLKYGSVLYK 700

Query: 199 -LEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            LE SN +    + ++I + + ++         +  + EA+ 
Sbjct: 701 HLETSNVDVGNALTELIVMQRGYSMNARAFTTGDDLIKEALN 742


>gi|253688972|ref|YP_003018162.1| hypothetical protein PC1_2595 [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251755550|gb|ACT13626.1| protein of unknown function DUF1078 domain protein [Pectobacterium
           carotovorum subsp. carotovorum PC1]
          Length = 405

 Score = 71.8 bits (174), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 53/132 (40%), Gaps = 5/132 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
            F+  ++   A    L  + +N++N+ TVGF++  V F+++         +    V    
Sbjct: 2   GFSQAVSGLNAASNNLDVIGNNIANSATVGFKSGTVTFADMFA-----GSKVGMGVKVAS 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPV 123
                  G+  S+  +LD A+ G  ++ L+   G +        + +  ++V+A G    
Sbjct: 57  VLQDFGNGTVTSSSRDLDIAISGGGFYRLQDTNGSVYYSRNGQFMLNGRNIVNAQGMQLT 116

Query: 124 LDMASVPIQIPQ 135
               +    + Q
Sbjct: 117 GYPVAGTPPVVQ 128



 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 12/123 (9%), Positives = 30/123 (24%), Gaps = 5/123 (4%)

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
           P  +                       + + + +  + L      +G     ++  S   
Sbjct: 281 PTQNGFGPGSLTGYAINDDGTIVGSYSNGQKQALGQILLAGFANPEGLSPEGDNAWSETA 340

Query: 182 PPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                        +   +     E SN +   E+  MI   + + S    I   +  +  
Sbjct: 341 SSGQAVVGLAGSGNLGKLVGKSTEMSNVDLSKELVNMIVAQRNYQSNAQTIKTQDSILQT 400

Query: 237 AIR 239
            + 
Sbjct: 401 LVS 403


>gi|254475161|ref|ZP_05088547.1| flagellar hook protein FlgE [Ruegeria sp. R11]
 gi|214029404|gb|EEB70239.1| flagellar hook protein FlgE [Ruegeria sp. R11]
          Length = 441

 Score = 71.8 bits (174), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 34/143 (23%), Positives = 58/143 (40%), Gaps = 10/143 (6%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
           +S N G++   A   RL++++DN++N+ T G++ ++  F  +V             V + 
Sbjct: 12  SSLNAGVSGLTANASRLASISDNIANSSTAGYKRVQTDFHSMVMGSSGGTYSAG-GVRTT 70

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALE---------SPRGIILTRDGRFKVTDDGS 113
              L  E G  +ST    D A+ G     +          S   ++LT    F+   DG 
Sbjct: 71  NVRLIDERGPLVSTNNATDLAVRGRGMLPVTSMTEVEVGASNPQMMLTTTASFRTNADGL 130

Query: 114 LVSASGKYPVLDMASVPIQIPQK 136
           L + SG   +   A     IP  
Sbjct: 131 LATESGLVLMGWPAQSDGTIPPY 153



 Score = 67.2 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 12/98 (12%), Positives = 32/98 (32%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLED 201
             +   +V+  + L  +    G +  +     P+            +     +     E+
Sbjct: 341 YDTGVSRVVYQVPLVDLPNPNGMIAMDRQTYMPSSESGSYFLWNAGEGPTGDILGYAREE 400

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           S  +   E+  MI   + ++S   +I   ++ + E   
Sbjct: 401 SATDVAGELTNMIQTQRAYSSNAKVIQTVDEMLQETTN 438


>gi|288960286|ref|YP_003450626.1| flagellar hook protein [Azospirillum sp. B510]
 gi|288912594|dbj|BAI74082.1| flagellar hook protein [Azospirillum sp. B510]
          Length = 871

 Score = 71.8 bits (174), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 13/100 (13%), Positives = 35/100 (35%), Gaps = 5/100 (5%)

Query: 144 EKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGF 198
                + + K+IA + + + +      R        +           E      V    
Sbjct: 768 MVNYDNGRSKMIARVPIITFNNPNALQRESGGVFLESEDAGKPNFNDPETNGAGAVVANS 827

Query: 199 LEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           +E SN +   E  +MI   + +++   ++  +++ + E +
Sbjct: 828 VESSNVDIADEFTKMIVTQRSYSANAKIVTTSDEMLQEVL 867



 Score = 69.9 bits (169), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/233 (14%), Positives = 78/233 (33%), Gaps = 29/233 (12%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           S    +    A  + L  ++DN++N+ T+G++ +   F  +V      + +    V +  
Sbjct: 6   SMTTAVLGLNAQSKALGHISDNIANSSTIGYKRVDSAFETMVLQSSQRLHEPG-GVTAQP 64

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALE-------------------SPRGIILTRDG 104
            +++   GS     +  + A++G  +F++                    +   +  TR G
Sbjct: 65  VFMNSIQGSLTQVQSPTNIAIQGQGFFSVSKVNVQNSTSTLVQTQTGAVNSSSVYYTRAG 124

Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
            F++     LV++SG      +      + +KD++  V     I +           ++ 
Sbjct: 125 DFELDKSRYLVNSSGYALNGWLVDPVTGVLKKDQVAPVQVSSLIDKPVATSTIDLEANLP 184

Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGF-------LE--DSNANSMY 208
            +    ++      P               ++         LE   SN   + 
Sbjct: 185 ATPTPGKKVPDSSIPIFDSQGNPRTVNFKWRQQADSSWRMVLETPGSNTKPVD 237


>gi|187925761|ref|YP_001897403.1| hypothetical protein Bphyt_3791 [Burkholderia phytofirmans PsJN]
 gi|187716955|gb|ACD18179.1| protein of unknown function DUF1078 domain protein [Burkholderia
           phytofirmans PsJN]
          Length = 503

 Score = 71.8 bits (174), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 56/124 (45%), Gaps = 2/124 (1%)

Query: 19  LSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--IDQKISFVASGKEYLSKEVGSFIST 76
           L  + +N++N +TVGF++   +F+++          +Q        +       G+  ST
Sbjct: 17  LDVIGNNIANANTVGFKSGAAQFADMYANSVATAVGNQVGIGTKLAEVQQQFSQGTITST 76

Query: 77  GTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQK 136
              LD A+ G+ +F L +   ++ +R+G F++  +G + +A G   +   A+    I   
Sbjct: 77  NQALDVAINGNGFFQLSNNGSMVYSRNGVFQLDKNGFITNAQGLQLMGYAANSSGIINTA 136

Query: 137 DEIF 140
             + 
Sbjct: 137 QTVP 140



 Score = 66.4 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 13/125 (10%), Positives = 34/125 (27%), Gaps = 5/125 (4%)

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                D                       +++   +  + L +     G V   N+    
Sbjct: 378 NSLQPDGYEAGTLTSFTIGADGTLTGNYSNRQTAALGQIALANFSNQNGLVNLGNNEFQQ 437

Query: 180 NIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
                  +  +  +     ++ G +E+SN +   E+  +I   + + +    I   +   
Sbjct: 438 TSASGVAQISAPGSTNHGVLQGGAVENSNVDLTSELVNLITAQRNYQANAQTIKTQQTVD 497

Query: 235 LEAIR 239
              I 
Sbjct: 498 QTLIN 502


>gi|254464969|ref|ZP_05078380.1| flagellar hook protein FlgE [Rhodobacterales bacterium Y4I]
 gi|206685877|gb|EDZ46359.1| flagellar hook protein FlgE [Rhodobacterales bacterium Y4I]
          Length = 435

 Score = 71.8 bits (174), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 9/141 (6%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
           +S N G++   A   RL++++DN++N+ T G++ ++  F  +V +           V + 
Sbjct: 5   SSLNAGVSGLSANASRLASISDNIANSSTRGYKRVQTDFHSMVLSGSGGTYSAG-GVRTT 63

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALES--------PRGIILTRDGRFKVTDDGSL 114
              L  E G  +ST    D A+ G     + S           ++LT  G F+    G L
Sbjct: 64  NVRLIDERGPLVSTNNATDLAVRGRGMLPVASITEVEAGGSPSMMLTSTGSFRTDSSGYL 123

Query: 115 VSASGKYPVLDMASVPIQIPQ 135
            + SG   +   A     +P 
Sbjct: 124 STESGLVLMGWPAQADGTLPD 144



 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 18/125 (14%), Positives = 36/125 (28%), Gaps = 5/125 (4%)

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                D  +V   +  +            S   KVI  + L  V    G    ++    P
Sbjct: 308 GTTEKDGTAVGSFVSVEVNASGEVIASYDSGDTKVIYKVPLADVSNINGMQALDSQTYKP 367

Query: 180 NIPP-----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
                        +     +     E+S  +   E+  MI   + ++S   +I   ++ +
Sbjct: 368 TDDSGAFYLWDAGEGPTGEILGYAQEESAVDVATELTDMIKTQRAYSSNAKVIQTVDEML 427

Query: 235 LEAIR 239
            E   
Sbjct: 428 QETTN 432


>gi|91791414|ref|YP_561065.1| flagellar basal body rod protein-like protein [Shewanella
           denitrificans OS217]
 gi|91713416|gb|ABE53342.1| Flagellar basal body rod protein-like protein [Shewanella
           denitrificans OS217]
          Length = 215

 Score = 71.8 bits (174), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 77/232 (33%), Gaps = 27/232 (11%)

Query: 11  AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
                 Q L+T ++N++N +T G+   +  F++V+ A      Q  S          +  
Sbjct: 9   GINTQLQSLATTSNNVANANTPGYLR-QTSFTQVLDAQIQTQTQVSS---------KQLS 58

Query: 71  GSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVP 130
           G+   TG   DFA+ G + F +E    + LT+DGRF + + G LV  SG   +     + 
Sbjct: 59  GAIKQTGNVYDFAVLGKSLFVVELLGELRLTQDGRFHLNEAGDLVHISGAMAMTSEGPLA 118

Query: 131 IQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS 190
                      +           +             G           N     L    
Sbjct: 119 ANTETDQIAARLWTVSTSESYTNLQPAEM--------GLYLANWDDWKTNDDSKVLAQAL 170

Query: 191 GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
                  + E    N+  ++ +M+ + +   S+       + ++   I  + 
Sbjct: 171 ------NYTEH---NATADVLEMMRIQRSVESLQKAYQTYDAAIGYGISELG 213


>gi|91785634|ref|YP_560840.1| putative flagellar hook protein FlgE [Burkholderia xenovorans
           LB400]
 gi|91689588|gb|ABE32788.1| putative flagellar hook protein FlgE [Burkholderia xenovorans
           LB400]
          Length = 503

 Score = 71.8 bits (174), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 55/124 (44%), Gaps = 2/124 (1%)

Query: 19  LSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--IDQKISFVASGKEYLSKEVGSFIST 76
           L  + +N++N +TVGF++   +F+++          +Q                G+  ST
Sbjct: 17  LDVIGNNIANANTVGFKSGAAQFADMYANSVATAVGNQIGIGTKLADVQQQFSQGTITST 76

Query: 77  GTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQK 136
              LD A+ G+ +F L +   ++ +R+G F++  +G + +A G   +   A+    I   
Sbjct: 77  NQALDVAINGNGFFQLSNNGSLVYSRNGVFQLDKNGFITNAQGLQLMGYAANSSGIINTA 136

Query: 137 DEIF 140
             + 
Sbjct: 137 QTVP 140



 Score = 65.7 bits (158), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 14/125 (11%), Positives = 35/125 (28%), Gaps = 5/125 (4%)

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                D  +                    +Q+   +  + L +     G V   N+    
Sbjct: 378 NSLQPDGYAAGTLTSFTIGADGTLTGNYSNQQTAALGQIVLANFSNQNGLVNLGNNEFQQ 437

Query: 180 NIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
                  +  +  +     ++ G +E+SN +   E+  +I   + + +    I   +   
Sbjct: 438 TSQSGVAQISAPGSTNHGVLQGGAVENSNVDLTSELVDLITAQRNYQANAQTIKTQQTVD 497

Query: 235 LEAIR 239
              I 
Sbjct: 498 QTLIN 502


>gi|218678737|ref|ZP_03526634.1| flagellar hook protein FlgE [Rhizobium etli CIAT 894]
          Length = 112

 Score = 71.8 bits (174), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 27/73 (36%), Gaps = 1/73 (1%)

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
            G V   N      +   P  +    +++ G LE SN +   E+ +MI   + + + + +
Sbjct: 38  SGNVYSANGQSGVTVTGFPQTNG-LGSIQSGALESSNVDLAGELTEMIEAQRSYTANSKV 96

Query: 227 IDENEKSMLEAIR 239
                  M   + 
Sbjct: 97  FQTGSDIMDVLVN 109


>gi|227328338|ref|ZP_03832362.1| flagellar hook protein FlgE [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 400

 Score = 71.4 bits (173), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 55/133 (41%), Gaps = 7/133 (5%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
            F+  ++   A    L  + +N++N+ TVGF++  V F+++         +    V    
Sbjct: 2   GFSQAVSGLNAASNNLDVIGNNIANSATVGFKSGTVTFADMFA-----GSKVGMGVKVAS 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  S+  +LD A+ G  ++   ++      +R+G+F +    ++V+A G   
Sbjct: 57  VLQDFGNGTVTSSSRDLDIAISGGGFYRLQDTNGSTYYSRNGQFMLNGR-NIVNAQGMQL 115

Query: 123 VLDMASVPIQIPQ 135
                +      Q
Sbjct: 116 TGYPVAGTPPTVQ 128



 Score = 69.9 bits (169), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 17/123 (13%), Positives = 34/123 (27%), Gaps = 5/123 (4%)

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
           P  +  +               E    + + + +  + L S    +G     ++  S   
Sbjct: 276 PTQNGFAPGSLTGFAINDDGTIEGNYSNGQKQALGQILLASFANPEGLSPEGDNAWSETA 335

Query: 182 PPTPLEDLSGVTVKRGFL-----EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                      T   G L     E SN +   E+  MI   + + S    I   +  +  
Sbjct: 336 SSGQAVVGLAGTGSLGKLIGKSTESSNVDLSKELVNMIVAQRNYQSNAQTIKTQDSILQT 395

Query: 237 AIR 239
            + 
Sbjct: 396 LVS 398


>gi|84502376|ref|ZP_01000512.1| flagellar hook protein FlgE, putative [Oceanicola batsensis
           HTCC2597]
 gi|84389188|gb|EAQ01985.1| flagellar hook protein FlgE, putative [Oceanicola batsensis
           HTCC2597]
          Length = 422

 Score = 71.4 bits (173), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 15/94 (15%), Positives = 37/94 (39%), Gaps = 5/94 (5%)

Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNAN 205
             + +  + L +V    G +  +N+    +              +   +  G +E SN +
Sbjct: 326 MRRALYQIPLATVPNPNGLMTADNATFLVSEASGSFTLSMAGSGTAGEITGGSVESSNVD 385

Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              E+ ++I   + F+S   +I   ++ + E +R
Sbjct: 386 IAEELTELIQKQRAFSSNAKIITTADEMLDETVR 419



 Score = 56.8 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 65/155 (41%), Gaps = 12/155 (7%)

Query: 13  LALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV--GAIKNDIDQKISFVASGKEYLSKEV 70
           +A  + ++ ++ N++N+DT GFR     F++++  GA         S V +   + + + 
Sbjct: 1   MANSKAVARISYNIANSDTYGFRRS---FAQMLTSGATIPTGTVSASGVRAEVVHQNTQD 57

Query: 71  GSFISTGTELDFALEGDAWFALESPRGI-------ILTRDGRFKVTDDGSLVSASGKYPV 123
           G+ ++TG   + A+ G+ +FA+              +TR G F+   +G L +ASG Y  
Sbjct: 58  GTPLTTGAATNLAISGNGFFAVTRNINEGTGEPEHFMTRAGDFQPDSEGYLRNASGMYLA 117

Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158
                    +   D     G +     +  +    
Sbjct: 118 GFPYDESGSLGVIDRNQFSGLQTVRIAEMSIAGNP 152


>gi|323492338|ref|ZP_08097491.1| flagellar hook protein FlgE [Vibrio brasiliensis LMG 20546]
 gi|323313385|gb|EGA66496.1| flagellar hook protein FlgE [Vibrio brasiliensis LMG 20546]
          Length = 398

 Score = 71.4 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 17/134 (12%), Positives = 42/134 (31%), Gaps = 9/134 (6%)

Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172
             VS +            +++     ++     G+   +G+V+    L      QG  + 
Sbjct: 269 FGVSTNNPNGYTSGELAGVRVEDNGMVYATYTNGQSQLQGQVV----LADFANPQGLAKV 324

Query: 173 ENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
             +  + +            +     +  G LE SN +   E+  ++   + + +    I
Sbjct: 325 SGTAWTQSFSSGAPIMGVPGSGTLGDLTPGALEGSNVDLTSELVNLMTAQRNYQANAKTI 384

Query: 228 DENEKSMLEAIRNI 241
             N+K        +
Sbjct: 385 STNDKLTQALFNAV 398



 Score = 70.3 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 52/131 (39%), Gaps = 6/131 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SFNI L+   A    L+T++ N++N  T GF+  + +F+ V      +  Q      +  
Sbjct: 2   SFNIALSGLDATNTELNTISHNIANASTYGFKGARTEFAAVY-----NGMQPGGVEVASI 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGKYP 122
                + GS   TG  +D A+ G  +F  +   G  + TR G F    D  +   +G   
Sbjct: 57  SQNFDKNGSVSGTGRAMDLAINGSGFFITKDTSGQLLYTRSGVFGTDKDNYVTGNTGAKL 116

Query: 123 VLDMASVPIQI 133
                     +
Sbjct: 117 QGYSVDGNNNL 127


>gi|328543139|ref|YP_004303248.1| hypothetical protein SL003B_1520 [polymorphum gilvum SL003B-26A1]
 gi|326412884|gb|ADZ69947.1| Conserved domain protein [Polymorphum gilvum SL003B-26A1]
          Length = 361

 Score = 71.4 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 17/121 (14%), Positives = 45/121 (37%)

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
              D  +    +    +          +Q+ + +  + L +    Q   R + S  +   
Sbjct: 241 LNQDGYAAGQVVGLSIDGAGRIIASYSNQQTRSLFEIPLATFQADQNLRRVDGSAFAATP 300

Query: 182 PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
                   +G T+    LE SNA+   E  ++I   Q +++ + ++   ++ + +A+  +
Sbjct: 301 SSGKAAYGNGGTIVANALESSNADIAAEFSKLIITQQAYSANSKVVTSADQMLNDALNMV 360

Query: 242 A 242
            
Sbjct: 361 R 361


>gi|21672604|ref|NP_660671.1| flagellar hook protein FlgE [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
 gi|25008456|sp|Q8K9K6|FLGE_BUCAP RecName: Full=Flagellar hook protein flgE
 gi|21623235|gb|AAM67882.1| flagellar hook protein FlgE [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
          Length = 409

 Score = 71.4 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 50/120 (41%), Gaps = 1/120 (0%)

Query: 9   LAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSK 68
           +   +     +  V++N++N  T+GF++    F ++V           S V       + 
Sbjct: 7   INGLMINNDYIDIVSNNIANASTIGFKSSTPSFFDIVSHSFYSNQIIKSGVGISNLVQNF 66

Query: 69  EVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASGKYPVLDMA 127
             G  + T  +LD  +  D +F +   +G +  TR+G F +  + ++V+  G Y      
Sbjct: 67  SDGVLVQTNRDLDLGIVQDGFFRVLDSKGYVYYTRNGHFLLDKNKNIVNGQGMYLTGQNQ 126



 Score = 66.4 bits (160), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 13/98 (13%), Positives = 30/98 (30%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLED 201
             +++ + I  + L      +       S  S        +          ++   FLE 
Sbjct: 310 YTNEEEQKIGQIFLAKFINPEKLKPESGSIWSATHESGQEKIGAAGDQGFGSLYTKFLES 369

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E+  MI   + + S        ++ +   + 
Sbjct: 370 SNVDLNKELINMIIAQRNYQSSAQAFKTEDRIINTLVN 407


>gi|289612565|emb|CBI60084.1| unnamed protein product [Sordaria macrospora]
          Length = 159

 Score = 71.4 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 52/126 (41%), Gaps = 14/126 (11%)

Query: 19  LSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------------QKISFVASGKEY 65
           +  +++N++N +T GF+  +  F  +   I                     + V      
Sbjct: 1   MRVISNNLANVNTTGFKRDRASFEAMSYQIITAQGAASTQESRYATGLNLGTGVRIQGTA 60

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLVSASGKYPVL 124
             +  GS  +TG  LD A+EGD +F ++ P G +  TR G F  + +G LV+  G   + 
Sbjct: 61  SIQTQGSLATTGNALDMAMEGDGYFQVQMPGGQLGYTRAGNFTRSAEGLLVTTEGYQVMP 120

Query: 125 DMASVP 130
            +    
Sbjct: 121 GITLPE 126


>gi|126730121|ref|ZP_01745933.1| flagellar hook protein FlgE, putative [Sagittula stellata E-37]
 gi|126709501|gb|EBA08555.1| flagellar hook protein FlgE, putative [Sagittula stellata E-37]
          Length = 435

 Score = 71.4 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/142 (23%), Positives = 63/142 (44%), Gaps = 10/142 (7%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
           +S N G+A   A   RL+T++DN++N+ T G++ ++ +FS +V    N        V + 
Sbjct: 5   SSLNAGVAGLSANATRLATISDNIANSATQGYKRVETEFSAMV-TSGNSGTYTAGGVRTQ 63

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALES---------PRGIILTRDGRFKVTDDGS 113
              L  E G+ ++T    D A+ G  +  +              + +T    F++  +G 
Sbjct: 64  TNRLVAEHGALVTTNNATDLAVRGTGFLPVAQATEVLAGNGNPQMFMTTTASFRLDAEGY 123

Query: 114 LVSASGKYPVLDMASVPIQIPQ 135
           L + SG   +   A+    IP 
Sbjct: 124 LRTESGLMLLGWRANADGSIPN 145



 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 31/98 (31%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLED 201
             +    VI  + L  V    G +   N    P+            D     +     E+
Sbjct: 335 FDTGASAVIFQIPLVDVPNPNGMIALNNQLFQPSAESGSFFLWDAGDGPTGEIVPYAREE 394

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           S  +   E+  MI   + ++S   +I   ++ + E   
Sbjct: 395 STTDVAAELTDMIQTQRAYSSNAKVIQTVDEMLQETTN 432


>gi|50120639|ref|YP_049806.1| flagellar hook protein FlgE [Pectobacterium atrosepticum SCRI1043]
 gi|49611165|emb|CAG74611.1| flagellar hook protein [Pectobacterium atrosepticum SCRI1043]
          Length = 405

 Score = 71.4 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 55/133 (41%), Gaps = 7/133 (5%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
            F+  ++   A    L  + +N++N+ TVGF++  V F+++         +    V    
Sbjct: 2   GFSQAVSGLNAASNNLDVIGNNIANSATVGFKSGNVTFADMFA-----GSKVGMGVKVAS 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G+  S+  +LD A+ G  ++   ++      +R+G+F +    ++V+A G   
Sbjct: 57  VLQDFGNGTVTSSSRDLDIAISGGGFYRLQDTNGSTYYSRNGQFMLNGR-NIVNAQGMQL 115

Query: 123 VLDMASVPIQIPQ 135
                +      Q
Sbjct: 116 TGYPVAGTPPTVQ 128



 Score = 68.0 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 17/123 (13%), Positives = 34/123 (27%), Gaps = 5/123 (4%)

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
           P  +  +               E    + + + +  + L S    +G     ++  S   
Sbjct: 281 PTQNGFAPGSLTGFAINDDGTIEGSYSNGQKQALGQILLASFANPEGLSPEGDNAWSETA 340

Query: 182 PPTPLEDLSGVTVKRGFL-----EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                      T   G L     E SN +   E+  MI   + + S    I   +  +  
Sbjct: 341 SSGQAVVGLAGTGSLGKLIGKSTESSNVDLSKELVSMIVAQRNYQSNAQTIKTQDSILQT 400

Query: 237 AIR 239
            + 
Sbjct: 401 LVS 403


>gi|294675564|ref|YP_003576179.1| flagellar hook protein FlgE [Rhodobacter capsulatus SB 1003]
 gi|294474384|gb|ADE83772.1| flagellar hook protein FlgE [Rhodobacter capsulatus SB 1003]
          Length = 452

 Score = 71.4 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/164 (21%), Positives = 63/164 (38%), Gaps = 10/164 (6%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS-FVAS 61
           +S N G+A   A   RL+T++DN++N+ T G++     F  +V           +  V +
Sbjct: 5   SSLNAGVAGLAANATRLATISDNIANSGTYGYKRATADFESMVLTQARSSGTYSAGGVRA 64

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALES---------PRGIILTRDGRFKVTDDG 112
               L  + GS I T   +D A+ G  +  + +          + + +T  G F    DG
Sbjct: 65  SSGRLIDQRGSLIGTSNAMDIAISGRGFLPVANTSALANGLGDQPLTMTSTGSFHTDKDG 124

Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156
            L + SG   +   A     IP        G +  +    +   
Sbjct: 125 VLRTDSGLVLLGWAALADGTIPVNARDTVTGLQPVVINANQTAG 168



 Score = 68.7 bits (166), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 13/98 (13%), Positives = 30/98 (30%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLED 201
             +   + +  + L  V    G    +N     +            D     V+    E 
Sbjct: 352 YDTGFIRTVYQVPLVDVSNINGLTALDNQTFQVSSTSGSFYLWDAGDGPTGAVEGYAREG 411

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           S  +   E+  +I   + ++S   +I   ++ + E   
Sbjct: 412 SAVDVAQELTNLIQTQRAYSSNAKVIQTVDEMLQETTN 449


>gi|207108617|ref|ZP_03242779.1| flagellar hook protein FlgE [Helicobacter pylori HPKX_438_CA4C1]
          Length = 294

 Score = 71.1 bits (172), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 14/128 (10%), Positives = 40/128 (31%), Gaps = 5/128 (3%)

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           +       +       +  + +   V      + +   +A + L +     G      + 
Sbjct: 164 SETYAIEQNGYQAGDLMDVRFDSDGVLLGAFSNGRTLALAQVALANFANDAGLQALGGNV 223

Query: 177 ISPNIPPTPLEDLSGVTVKRGF-----LEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
            S           +  T +RG      LE SN +    +  +I + + F + +  +  ++
Sbjct: 224 FSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQRGFQANSKAVTTSD 283

Query: 232 KSMLEAIR 239
           + +   + 
Sbjct: 284 QILNTLLN 291


>gi|333008282|gb|EGK27756.1| flagellar basal-body rod protein flgG domain protein [Shigella
           flexneri K-272]
 gi|333019772|gb|EGK39044.1| flagellar basal-body rod protein flgG domain protein [Shigella
           flexneri K-227]
          Length = 82

 Score = 71.1 bits (172), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 9/80 (11%), Positives = 28/80 (35%), Gaps = 5/80 (6%)

Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQK 219
              G      +  +         + +        + +G++E SN N   E+  MI + + 
Sbjct: 2   NDTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRA 61

Query: 220 FNSITTLIDENEKSMLEAIR 239
           +   +  +   ++ + +  +
Sbjct: 62  YEINSKAVSTTDQMLQKLTQ 81


>gi|89067517|ref|ZP_01155030.1| flagellar hook protein FlgE, putative [Oceanicola granulosus
           HTCC2516]
 gi|89047086|gb|EAR53140.1| flagellar hook protein FlgE, putative [Oceanicola granulosus
           HTCC2516]
          Length = 433

 Score = 71.1 bits (172), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 39/168 (23%), Positives = 62/168 (36%), Gaps = 10/168 (5%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
           +S N  +A   A   RL+T+ADN++N+ T G++     F  +V             V   
Sbjct: 5   SSLNASVAGLTANASRLATIADNIANSSTFGYKRATTDFHSMVLNTTEGTYSAG-GVRVT 63

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALESP---------RGIILTRDGRFKVTDDGS 113
            + L  + GS +ST    D A+ G     + +             +LT  G F+V D G 
Sbjct: 64  TQRLIDQRGSIVSTDNVTDLAVRGRGMMPVSTEAALGTGNASSQFLLTSTGSFRVDDQGY 123

Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLY 161
           L S SG   +   A +   +P        G +       +       Y
Sbjct: 124 LASQSGLILMGWPAGIDGNVPAFPRDTADGLQPIRINANQSAGEATTY 171



 Score = 69.1 bits (167), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 17/120 (14%), Positives = 35/120 (29%), Gaps = 5/120 (4%)

Query: 125 DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP- 183
           D  +V        +          +   KVI  + L  V    G    +           
Sbjct: 311 DGNAVGSMTSIDIDANGFMRAAFDTGISKVIYQIPLVDVSNVNGLETLDQQTYRATPESG 370

Query: 184 ----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
                   D     +    LE+S  +   E+ ++I   + ++S   +I   ++ + E   
Sbjct: 371 SYFLWDAGDGPTGDLLSYALEESATDVAGELTELIQTQRAYSSNAKVIQTVDEMLQETTN 430


>gi|162147445|ref|YP_001601906.1| flagellar hook protein flgE [Gluconacetobacter diazotrophicus PAl
           5]
 gi|209545555|ref|YP_002277784.1| hypothetical protein Gdia_3444 [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|161786022|emb|CAP55604.1| putative flagellar hook protein flgE [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209533232|gb|ACI53169.1| protein of unknown function DUF1078 domain protein
           [Gluconacetobacter diazotrophicus PAl 5]
          Length = 569

 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 56/172 (32%), Gaps = 15/172 (8%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
            + +  ++   A     + +++N++N+ TVG++     F + V               S 
Sbjct: 5   NALSTAVSGIDAQSTAFTNLSNNIANSQTVGYKAESTSFQDFVAGSLTSSTASSDISDSV 64

Query: 63  KEYLSKEVGSFISTGTELD---FALEGDAWFA------------LESPRGIILTRDGRFK 107
                + VG+  +     D    A+ G+  F              +       TR+G F 
Sbjct: 65  AAVDVQNVGAQGTASASTDTLAMAINGNGLFDVSEETGQATSGTTQFENTQYYTRNGEFY 124

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG 159
             ++G LV+ +G Y    MA     +       NV        +   I    
Sbjct: 125 ENNEGYLVNTTGYYLDGYMADSNGSLGNTLTQINVANVSFRPTETTTITQSA 176



 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 10/94 (10%), Positives = 32/94 (34%), Gaps = 5/94 (5%)

Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNAN 205
             ++I  + L +     G         +        +          T++ G++E S  +
Sbjct: 472 DTQLIGKVALSTFANVDGLNAVTGQAYTATAASGAAQTGTVGSNGTGTLEVGYVESSTTD 531

Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              ++  +I   + +++ T ++   +  +   I 
Sbjct: 532 LTSDLSALIVDQEAYSANTKVVTTADDLLQATIS 565


>gi|91976146|ref|YP_568805.1| hypothetical protein RPD_1667 [Rhodopseudomonas palustris BisB5]
 gi|91682602|gb|ABE38904.1| protein of unknown function DUF1078-like [Rhodopseudomonas
           palustris BisB5]
          Length = 610

 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 51/139 (36%), Gaps = 12/139 (8%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +    +A   A    L  ++ N++N+ T  F+ +   F +++     +  Q    V S  
Sbjct: 6   ALTTSVAGLRANSYALENISGNIANSQTTAFKRVDTAFLDLIPQAGTNA-QVAGSVTSES 64

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRG-----------IILTRDGRFKVTDDG 112
              +   GS  S       A+ G+ +FA++ P                TR G F +  +G
Sbjct: 65  RLTNTLSGSVQSASVSTYMAINGEGFFAVQKPGSFSDNSPVFTGVNNYTRRGDFSLDKNG 124

Query: 113 SLVSASGKYPVLDMASVPI 131
            LV+ +G Y          
Sbjct: 125 YLVNGAGYYLQGVAIDPTT 143



 Score = 51.0 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/120 (10%), Positives = 35/120 (29%)

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                D  +                    + +   +A + + + + +    R +      
Sbjct: 488 NQLQQDGYAAGQLTSVSVSNEGRVVGAYSNGRNIDLAEVSVATFNGANFLKRIDGGAFEV 547

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
                      G ++    LE SN +   E  ++I   Q +++ T +I      + + + 
Sbjct: 548 TNESGEALYGKGGSISGSSLESSNTDIADEFTKLIVTQQAYSANTKVITTANTMVQDLLN 607


>gi|86750926|ref|YP_487422.1| hypothetical protein RPB_3817 [Rhodopseudomonas palustris HaA2]
 gi|86573954|gb|ABD08511.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2]
          Length = 598

 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 51/139 (36%), Gaps = 12/139 (8%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +    +A   A    L  ++ N++N+ T  F+ +   F +++     +  Q    V +  
Sbjct: 6   ALTTSVAGLRANSYALENISGNIANSQTTAFKRVDTSFLDLIPQAGTN-QQLAGSVTAES 64

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRG-----------IILTRDGRFKVTDDG 112
              +   GS  S       A+ G+ +FA++ P                TR G F +  +G
Sbjct: 65  RLTNTLSGSVQSASVSTYMAINGEGFFAVQKPGSFSDNSPVFTGVNNYTRRGDFSLDKNG 124

Query: 113 SLVSASGKYPVLDMASVPI 131
            LV+ +G Y          
Sbjct: 125 YLVNGAGYYLQGVAIDPTT 143



 Score = 51.0 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/120 (10%), Positives = 35/120 (29%)

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                D  +                    + +   +A + + + + +    R +      
Sbjct: 476 NQLQQDGYAAGQLTSVSVSNEGRVVGSYSNGRNIDLAEVSVATFNGANFLKRIDGGAFEV 535

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
                      G ++    LE SN +   E  ++I   Q +++ T +I      + + + 
Sbjct: 536 TNESGEALYGKGGSISGSSLESSNTDIADEFTKLIVTQQAYSANTKVITTANTMVQDLLN 595


>gi|126738557|ref|ZP_01754262.1| flagellar hook protein FlgE, putative [Roseobacter sp. SK209-2-6]
 gi|126720356|gb|EBA17062.1| flagellar hook protein FlgE, putative [Roseobacter sp. SK209-2-6]
          Length = 446

 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 61/165 (36%), Gaps = 10/165 (6%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
           ++ N G++   A    L+ ++DN++N+ T G++ I+  F  +V   K         V   
Sbjct: 18  SALNAGVSGLSANASSLAAISDNIANSSTRGYKRIQTDFQSMVVGSKGGSYTAG-GVGFD 76

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFAL---------ESPRGIILTRDGRFKVTDDGS 113
           K  L  E G  + T    D A+ G     +              ++LT  G F+   DG 
Sbjct: 77  KLRLVDERGPLVGTNNATDLAVSGRGMLPVAALSEVESGNGNPTMMLTTTGSFRTNADGY 136

Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158
           L +ASG   +   A+    +         G +       ++    
Sbjct: 137 LTTASGLVLMGWPANANGTVDDGPRDTAEGLEPIQYNMNQLTGEP 181



 Score = 69.5 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 38/120 (31%), Gaps = 5/120 (4%)

Query: 125 DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP- 183
           D + V   +  + +          S   KVI  + L  +    G    +     P+    
Sbjct: 324 DGSEVGTMVGVEVDAQGYVRANYDSGASKVIYKVPLADMANPNGLKALDKQTYLPSSQSG 383

Query: 184 ----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
                   D     V    +E+S  +   E+  MI   + ++S   +I   ++ + E   
Sbjct: 384 SYFLWDAGDGPTGEVASYSMEESATDVATELTDMIKTQRAYSSNAKVIQTVDEMLQETTN 443


>gi|283784085|ref|YP_003363950.1| lateral flagellar hook protein [Citrobacter rodentium ICC168]
 gi|282947539|emb|CBG87091.1| lateral flagellar hook protein [Citrobacter rodentium ICC168]
          Length = 400

 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/146 (23%), Positives = 61/146 (41%), Gaps = 6/146 (4%)

Query: 7   IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66
           I      A+ ++L  +++N++N  TVG++++   FS +         Q +    +G    
Sbjct: 5   IAATGLNAVNEQLDGISNNIANAGTVGYKSMTTDFSAMYAD-----SQAMGVSVAGTAQS 59

Query: 67  SKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125
               GS +STG  LD A+    +F + +S   I  TR G F+   +G +V+ASG      
Sbjct: 60  IARGGSMVSTGNALDLAINNGGFFVMCDSAGNITYTRAGSFETDKNGYIVNASGACLQGY 119

Query: 126 MASVPIQIPQKDEIFNVGEKGEISQK 151
                  +          + G I  +
Sbjct: 120 PVDGSGTLQTGTVTDLQIQTGNIPAQ 145



 Score = 68.0 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 17/132 (12%), Positives = 44/132 (33%), Gaps = 9/132 (6%)

Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174
           V+ +            +Q+    +++     GE   +G+++    L +     G      
Sbjct: 273 VTTNSANGYASATQNGVQVDDDGKVYATYSNGERMLQGQIV----LATFPNENGLEAVSG 328

Query: 175 SGISPNIPPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           +                   S  T+  G LE SN +   E+ +++   + + + T +I  
Sbjct: 329 TAWVQTGESGSALIGVPGSGSCGTLSSGMLESSNVDITTELVELMTAQRNYQANTKVIST 388

Query: 230 NEKSMLEAIRNI 241
           + +      + +
Sbjct: 389 STQLDDALFQAM 400


>gi|170744543|ref|YP_001773198.1| flagellar hook protein FlgE [Methylobacterium sp. 4-46]
 gi|168198817|gb|ACA20764.1| protein of unknown function DUF1078 domain protein
           [Methylobacterium sp. 4-46]
          Length = 407

 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 70/183 (38%), Gaps = 2/183 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +   G++   A   R+STVA+N+ N  T G++ +  +FS ++ +     D     V + +
Sbjct: 6   ALRTGMSGMNAQSNRISTVAENVQNAGTTGYKRVSTEFSSLLLSSSATGDYNSGSVETVQ 65

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVT-DDGSLVSASGKY 121
                + G+ +ST ++ D A+ G+ +F ++   G    TR G F      G+  +A+G  
Sbjct: 66  RRAVSDEGARVSTSSKSDLAIAGNGFFVVKDASGASYLTRAGNFVPDGSTGTFKNAAGFT 125

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
            +          P  + +  +      +   K  A+                 SG  P  
Sbjct: 126 LMGYSLKNGQASPTLNSLDGMVPVNISALGMKASASTKGALTGNLDSTAAAVTSGAVPAG 185

Query: 182 PPT 184
              
Sbjct: 186 SNY 188



 Score = 64.5 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 12/83 (14%), Positives = 27/83 (32%), Gaps = 5/83 (6%)

Query: 162 SVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHL 216
            VD       R  +     +    L+           +  G LE SN +   E+  MI  
Sbjct: 322 DVDSPDNLKPRAGNVYETTLESGALQVGFANQGGRGGIVSGALEQSNVDVSTELTSMIAS 381

Query: 217 TQKFNSITTLIDENEKSMLEAIR 239
              + + + +   + + +   ++
Sbjct: 382 QTVYTANSKVFMTSNEMLDTLMQ 404


>gi|254419105|ref|ZP_05032829.1| conserved domain protein [Brevundimonas sp. BAL3]
 gi|196185282|gb|EDX80258.1| conserved domain protein [Brevundimonas sp. BAL3]
          Length = 588

 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 11/90 (12%), Positives = 30/90 (33%), Gaps = 5/90 (5%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYE 209
           IA + + +            +  + ++                T+    LE S  +   E
Sbjct: 496 IAQVAIATFPSPDSLKEVSGNAYAVSLESGTFNLKAAGTGGAGTIAAQQLESSTVDLSAE 555

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              +I   + +++ + +I   ++ + E I 
Sbjct: 556 FTGLITTQRAYSASSKIITTADEMLAELIN 585



 Score = 70.3 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 64/185 (34%), Gaps = 8/185 (4%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV-GAIKNDIDQKISFVASGK 63
              G++   A    L+ ++ N++N +TVG++  + +F  +V    +         V +  
Sbjct: 1   MLAGVSGLAANSAALAAISQNIANVNTVGYKRSQGEFQTLVNSQTRAGGSYSAGGVMANT 60

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-------LTRDGRFKVTDDGSLVS 116
                + G    T    D A+ G  +F   +    +        TR G F+V + G L +
Sbjct: 61  RAFVSQEGQLQRTTASTDLAVSGQGFFVTTTQAENVGATDTRLFTRAGAFRVDNLGYLKN 120

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           ++G Y          +I       +      I   G          ++ +    +  +S 
Sbjct: 121 SAGLYLQGWPVDSNGEIATDPSDLSRLRSVNIGSVGGTAEPTTRVQINANLRSTQAVSSP 180

Query: 177 ISPNI 181
            +P  
Sbjct: 181 AAPTN 185


>gi|144901061|emb|CAM77925.1| probable: Flagellar hook protein FlgE, gene: FLGE OR GSU0419
           [Magnetospirillum gryphiswaldense MSR-1]
          Length = 605

 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/236 (16%), Positives = 80/236 (33%), Gaps = 37/236 (15%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI-----SF 58
           + N    A +A    + +++ N+SN +T G++  +  F  V+   K              
Sbjct: 79  AMNNASTAMMATSWDMGSISQNISNVNTTGYKRKETLFKTVMSESKAGPSTHSGKLNIFG 138

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWF----------------------ALESPR 96
           V +   Y  ++ G+   +    D A+ G  +                       +++ P 
Sbjct: 139 VKTADRYHIEQQGTITGSNWNTDLAINGRGFLLVAPPSTTTSGTTVSSNAPTSASVDDPA 198

Query: 97  GIILTRDGRFKV----TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG 152
            ++ TRDG F        +    +A G Y +  MA     I Q   +  V    E + +G
Sbjct: 199 SVLYTRDGSFHFVAGPNQEKYFTTAGGNYVLGWMADDTGTIDQTGALTPVYTLPETTMEG 258

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMY 208
           +   T      ++ +      ++  S +    PL     +T+       S  ++  
Sbjct: 259 RET-TEASVFANIPRDATLSASNFNSTSTFTDPLGASQTLTLNW-----SRVDATT 308



 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 11/122 (9%), Positives = 27/122 (22%), Gaps = 6/122 (4%)

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177
                  D       I               + K + +  + +              +  
Sbjct: 475 HIDNIATDGYGSGTLISSGFNERGEMYGQFTNGKTRALFKLPIAQFVAENNLEPISGNLF 534

Query: 178 SPNIPPTP------LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
             +              +         LE SN +   E  +MI   + + +  T+    +
Sbjct: 535 RRSREAGDITVSSVENAVGAPRFSPSSLEASNVDIGQEFTKMIVTQKAYTTNATVFKTAD 594

Query: 232 KS 233
           + 
Sbjct: 595 EM 596


>gi|254440385|ref|ZP_05053879.1| conserved domain protein [Octadecabacter antarcticus 307]
 gi|198255831|gb|EDY80145.1| conserved domain protein [Octadecabacter antarcticus 307]
          Length = 432

 Score = 70.3 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/182 (12%), Positives = 49/182 (26%), Gaps = 23/182 (12%)

Query: 81  DFALEGDAWFALESPRGIILTRDG--RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDE 138
           D A  G    ++ +  G   T DG            +          +  +         
Sbjct: 248 DLAGLGGRLLSVNNTTGGAYTADGTVSVTTDSGTIEIDIGNIGEPGGLTQLSDNFAPVSI 307

Query: 139 IFNVGEKGEISQK----------------GKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
           I N    G ++                   +++  + L  V    G +  +N   S    
Sbjct: 308 IKNGSPVGTMTSVEVDANGFVRALFDNGVSRIMYQVPLVDVSNPNGLISEDNQSYSVTPE 367

Query: 183 P-----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                     D     +     E+S  +   E+  +I   + ++S   +I   ++ + E 
Sbjct: 368 SGQFFLWDAGDGPTGDIVSFAREESATDVAAELTNLIKTQRAYSSNAKVIQTVDEMLQET 427

Query: 238 IR 239
             
Sbjct: 428 TN 429



 Score = 63.0 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 65/194 (33%), Gaps = 3/194 (1%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
           +SFN  +A   +   RL+T++DN++N+ T G++ +   F  +V             V   
Sbjct: 5   SSFNASVAGLASNASRLATISDNIANSSTYGYKRVVADFHSMVVDGGKGKYTAG-GVGVT 63

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF--KVTDDGSLVSASGK 120
            + L  E G  ++T    D A+ G     +     + +  +  F  ++   GS  + +  
Sbjct: 64  TQRLIDERGPLVATSNATDLAVRGRGMLPVTERSSVSVGSESDFSLRLATTGSFRTDAEG 123

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
           Y       + +  P   +        +     + I       +      V    +  +  
Sbjct: 124 YLTTTNGLLLLGWPSNADGSLPNLPRDTIGGLEPIRIDTNQFISDPTTNVELAVNLPATA 183

Query: 181 IPPTPLEDLSGVTV 194
                  D   + V
Sbjct: 184 TEAGASGDTEELLV 197


>gi|329849962|ref|ZP_08264808.1| flagellar hook protein flgE [Asticcacaulis biprosthecum C19]
 gi|328841873|gb|EGF91443.1| flagellar hook protein flgE [Asticcacaulis biprosthecum C19]
          Length = 474

 Score = 70.3 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 59/172 (34%), Gaps = 7/172 (4%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
             +   G+ A  A    LST+++N++N +T G++ +   F+ +V           + V +
Sbjct: 4   NRAMQSGVTALAANASALSTISNNIANANTTGYKRVTTNFTNLVSGTSGTATYASNGVTA 63

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFAL-------ESPRGIILTRDGRFKVTDDGSL 114
             +      G   +  +     ++G  +F              ++ TRDG F     G L
Sbjct: 64  AVQQNMTARGELNAASSGYSLGIDGQGFFVTSDTSDAINQGSTMLFTRDGSFNTDTSGYL 123

Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
            +A+G Y     A     +              ++       +    S D +
Sbjct: 124 RNAAGLYLQGWQADSSGTVNPSSTDITRLGPINVANIANRAESTTRVSFDAN 175



 Score = 64.1 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 10/97 (10%), Positives = 34/97 (35%), Gaps = 5/97 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLED 201
             +   + +A + L +   + G      +  + +            +     +    LE 
Sbjct: 374 YNNGNTRTLAQVALATFINANGLTPISGNAFTVSSQSGGFTLREPGEGGAGNLAPAALEA 433

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  +   E   +I   + +++ + +I  +++ + E +
Sbjct: 434 STVDLAQEFTGLITTQRAYSAASKIITTSDEMLQELL 470


>gi|313895783|ref|ZP_07829337.1| flagellar hook-basal body complex protein FlhP domain protein
           [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312975208|gb|EFR40669.1| flagellar hook-basal body complex protein FlhP domain protein
           [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 117

 Score = 70.3 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 13/90 (14%), Positives = 30/90 (33%), Gaps = 6/90 (6%)

Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPP------TPLEDLSGVTVKRGFLEDSNANSMYE 209
           A + +       G  +   +    +             + +G  +    LE SN +   +
Sbjct: 25  AQVAVAKFPNPSGLTKLGGNLYQESNNSNVKTVQPQTVETAGAKITPSSLEMSNVDISDQ 84

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              MI   + F S + +I  +++ +   I 
Sbjct: 85  FSDMIITQRGFQSNSKIITVSDEMLETLIN 114


>gi|21748188|emb|CAD41958.1| flagellar hook protein [Pseudomonas fluorescens]
          Length = 181

 Score = 70.3 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 41/128 (32%), Gaps = 5/128 (3%)

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           +    PV D  +       K +   V      +Q+ K I  + L S +  QG      + 
Sbjct: 52  SYRNPPVTDGYATGQITGLKIDGSGVLFATFSNQQSKAIGQISLASFNNEQGLQPAGGTT 111

Query: 177 ISPNIPP-----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
                          E  +  ++K   LE+SN N   E+  +I     + +    I    
Sbjct: 112 WKETFASGQPGYDAPESGTLGSIKASSLENSNVNLTNELVDLIKAQSNYQANAKTISTQS 171

Query: 232 KSMLEAIR 239
             M   I+
Sbjct: 172 TIMQTIIQ 179


>gi|218672515|ref|ZP_03522184.1| flagellar basal body rod protein FlgG [Rhizobium etli GR56]
          Length = 58

 Score = 70.3 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 10/52 (19%), Positives = 25/52 (48%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
            +  I      A +  L  +A+N++N +T GF+  + +F++++   +    
Sbjct: 1  MRALAIAATGMDAQQTNLEVIANNIANINTTGFKRARAEFTDLLYQTERAKG 52


>gi|156976141|ref|YP_001447047.1| flagellar hook protein FlgE [Vibrio harveyi ATCC BAA-1116]
 gi|156527735|gb|ABU72820.1| hypothetical protein VIBHAR_04912 [Vibrio harveyi ATCC BAA-1116]
          Length = 399

 Score = 70.3 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 53/132 (40%), Gaps = 6/132 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SFNI L+   A    L+T++ N++N  T GF+  + +F+ V      +  Q      +  
Sbjct: 2   SFNIALSGLDATNTELNTISHNIANASTYGFKGGRTEFAAVY-----NGMQPGGVEVASI 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLVSASGKYP 122
                + GS   TG  +D A+ G  +F  +   G +  TR G F    +  + + +G   
Sbjct: 57  SQNFDKNGSVTGTGRAMDLAINGSGFFVTKDHMGQMLYTRAGVFGTDKNNFVTANNGAKL 116

Query: 123 VLDMASVPIQIP 134
                     + 
Sbjct: 117 QGYSVDNNANLQ 128



 Score = 67.2 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 18/134 (13%), Positives = 43/134 (32%), Gaps = 9/134 (6%)

Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172
             VS +            +++     ++     G+   +G+V+    L     +QG  + 
Sbjct: 270 FGVSTNNPNGYTSGELAGVRVEDNGMVYATYTNGQSQLQGQVV----LADFANTQGLSKV 325

Query: 173 ENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
             +  + +            T     +  G LE SN +   E+  ++   + + +    I
Sbjct: 326 SGTAWTQSFSSGAPIMGVPGTGTLGDLTPGALEGSNVDLTSELVALMTAQRNYQANAKTI 385

Query: 228 DENEKSMLEAIRNI 241
             N+K        +
Sbjct: 386 STNDKLTQALFNAV 399


>gi|153831673|ref|ZP_01984340.1| flagellar hook protein FlgE [Vibrio harveyi HY01]
 gi|269960116|ref|ZP_06174492.1| Flagellar hook protein flgE [Vibrio harveyi 1DA3]
 gi|148872183|gb|EDL71000.1| flagellar hook protein FlgE [Vibrio harveyi HY01]
 gi|269835087|gb|EEZ89170.1| Flagellar hook protein flgE [Vibrio harveyi 1DA3]
          Length = 399

 Score = 70.3 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 53/132 (40%), Gaps = 6/132 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SFNI L+   A    L+T++ N++N  T GF+  + +F+ V      +  Q      +  
Sbjct: 2   SFNIALSGLDATNTELNTISHNIANASTYGFKGGRTEFAAVY-----NGMQPGGVEVASI 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLVSASGKYP 122
                + GS   TG  +D A+ G  +F  +   G +  TR G F    +  + + +G   
Sbjct: 57  SQNFDKNGSVTGTGRAMDLAINGSGFFVTKDHMGQMLYTRAGVFGTDKNNFVTANNGAKL 116

Query: 123 VLDMASVPIQIP 134
                     + 
Sbjct: 117 QGYSVDNNANLQ 128



 Score = 67.2 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 18/134 (13%), Positives = 43/134 (32%), Gaps = 9/134 (6%)

Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172
             VS +            +++     ++     G+   +G+V+    L     +QG  + 
Sbjct: 270 FGVSTNNPNGYTSGELAGVRVEDNGMVYATYTNGQSQLQGQVV----LADFANTQGLSKV 325

Query: 173 ENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
             +  + +            T     +  G LE SN +   E+  ++   + + +    I
Sbjct: 326 SGTAWTQSFSSGAPIMGVPGTGTLGDLTPGALEGSNVDLTSELVALMTAQRNYQANAKTI 385

Query: 228 DENEKSMLEAIRNI 241
             N+K        +
Sbjct: 386 STNDKLTQALFNAV 399


>gi|296535149|ref|ZP_06897378.1| flagellar hook protein FlgE [Roseomonas cervicalis ATCC 49957]
 gi|296264524|gb|EFH10920.1| flagellar hook protein FlgE [Roseomonas cervicalis ATCC 49957]
          Length = 436

 Score = 69.9 bits (169), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 59/165 (35%), Gaps = 13/165 (7%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           S     +   A    ++ V++N++N+ T G++ +   F+E +      ++   +  A+  
Sbjct: 8   SLYAATSGLGAQTAAITNVSNNVANSQTTGYKRVDTAFAEQLSQSTARLNGSSTVSAAPV 67

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESP------------RGIILTRDGRFKVTDD 111
             +S   G        L  A+ G+  FA+  P                 TR+G F  T +
Sbjct: 68  ATVS-RGGDISQVENPLALAISGNGLFAVSRPAGTDANGNTVFSPTQFYTRNGDFSKTAE 126

Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156
           G LV+ SG        +       +  +  V E     +    I 
Sbjct: 127 GYLVNTSGYALEGWPVANGAVNRGQLGLIQVDEAPYAPEATTQIG 171



 Score = 68.7 bits (166), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 22/162 (13%), Positives = 51/162 (31%), Gaps = 5/162 (3%)

Query: 86  GDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEK 145
           GD + A   P  I L   G  +     +  +        + A+         +       
Sbjct: 275 GDLFGAGSQPVAISLGTFGSTQGVTQYAGATYQQNSVTANGAAPGAYTGVGIKENGEVVV 334

Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLE 200
              + K + IA + + +   + G  R +    +              +    T+    +E
Sbjct: 335 SYDNGKSRTIAQVPIVTFQNADGLQREDGQAFTATQAAGQFRVLAAGEQGTGTLATSSIE 394

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            SN +   E  +MI   + +++ + ++      M E +  + 
Sbjct: 395 ASNVDITSEFSKMIVAQRAYSANSRVLSTVSGLMSETVDMLR 436


>gi|322380221|ref|ZP_08054447.1| flagellar hook protein FlgE [Helicobacter suis HS5]
 gi|321147348|gb|EFX42022.1| flagellar hook protein FlgE [Helicobacter suis HS5]
          Length = 619

 Score = 69.9 bits (169), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 14/128 (10%), Positives = 36/128 (28%), Gaps = 5/128 (3%)

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           +       +       +  + +   V      + K   +A + L +     G      S 
Sbjct: 489 SETYAIEQNGYQAGDLMDVRFDNDGVLLGSFSNGKTLSLAQVALANFANDAGLQADGGSV 548

Query: 177 ISPNIPPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
            S                    V    LE SN +    +  +I + + F + +  +  ++
Sbjct: 549 FSETSNSGKALIGAANTGRRGGVSGSKLESSNVDLSRSLTNLIVVQRGFQANSKAVTTSD 608

Query: 232 KSMLEAIR 239
           + +   + 
Sbjct: 609 QILNTLLN 616


>gi|323203175|gb|EFZ88205.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
          Length = 179

 Score = 69.9 bits (169), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 44/127 (34%), Gaps = 4/127 (3%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   +        + V 
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVDGLSLATRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
           +         G    T   LD AL+ D W  +++       TR+G  +V   G  ++  G
Sbjct: 59  ASTPGADMTPGQLDYTSRPLDVALQQDGWLVVQAADGAEGYTRNGNIQVGPTG-QLTIQG 117

Query: 120 KYPVLDM 126
              + + 
Sbjct: 118 HPVIGEG 124


>gi|600722|gb|AAA92801.1| flagellar hook FlgE [Helicobacter mustelae]
          Length = 403

 Score = 69.9 bits (169), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 57/185 (30%), Gaps = 15/185 (8%)

Query: 24  DNMSNTDTVGFRTIKVKFSEVVGAI-------------KNDIDQKISFVASGKEYLSKEV 70
           +N++N +T GF+  +  F +++                  +       V           
Sbjct: 1   NNIANVNTTGFKYSRASFVDMISQTKLIATSPHKGGLGGQNDVSVGLGVNVNSTTKVFSQ 60

Query: 71  GSFISTGTELDFALEGDAWFALES--PRGIILTRDGRFKVTDDGSLVSASGKYPVLDMAS 128
           GS  +T  + D A+EGD +F +     +    TRDG F    +G+LV+  G      M  
Sbjct: 61  GSTQNTDVKTDLAIEGDGFFIISPDRGKTQNFTRDGEFLFDANGNLVTNGGYVVQGWMKD 120

Query: 129 VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED 188
                 +  E            +   I    +     S     R N     ++       
Sbjct: 121 DLRNAEKISEDDFFRVDTTKPIQNIQIDPAMMMPARASSNISLRANLNAGRHVDQVANVF 180

Query: 189 LSGVT 193
             G T
Sbjct: 181 GLGST 185


>gi|295678058|ref|YP_003606582.1| fagellar hook-basal body protein [Burkholderia sp. CCGE1002]
 gi|295437901|gb|ADG17071.1| fagellar hook-basal body protein [Burkholderia sp. CCGE1002]
          Length = 510

 Score = 69.9 bits (169), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 60/151 (39%), Gaps = 2/151 (1%)

Query: 19  LSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGKEYLSKEVGSFIST 76
           L  + +N++N +TVGF++   +F+++           Q        +       G+  +T
Sbjct: 17  LDVIGNNIANANTVGFKSGTAEFADMYANSVATATSQQIGIGTKLSEVQQQFSQGTITTT 76

Query: 77  GTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQK 136
              L+ A+ G+ ++ L     ++ +R+G F++  +G + +A G   +   AS    I   
Sbjct: 77  NQALNVAINGNGFYQLSDNGTLVYSRNGVFQLDKNGFITNAQGLKLMGYAASSAGIINTA 136

Query: 137 DEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
             +        I+ +     T GL       
Sbjct: 137 QTVPLTVPTANIAPQATTSITAGLNLNAQDN 167



 Score = 64.9 bits (156), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 13/125 (10%), Positives = 34/125 (27%), Gaps = 5/125 (4%)

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                D  +                    + +   +  + L +     G V   N+    
Sbjct: 385 NNLSTDGYAAGQLTSFTVSADGTLTGNYSNGQTAALGQIVLANFANQNGLVNLGNNEYGQ 444

Query: 180 NIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
                  +  +  +     ++ G +E+SN +   E+  +I   + + +    I   +   
Sbjct: 445 TSASGVAQISTPGSTNHGVLQGGAVENSNVDLTSELVNLITAQRNYQANAQTIKTQQAVD 504

Query: 235 LEAIR 239
              I 
Sbjct: 505 QTLIN 509


>gi|56695115|ref|YP_165462.1| flagellar hook protein FlgE, putative [Ruegeria pomeroyi DSS-3]
 gi|56676852|gb|AAV93518.1| flagellar hook protein FlgE, putative [Ruegeria pomeroyi DSS-3]
          Length = 431

 Score = 69.5 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 39/168 (23%), Positives = 67/168 (39%), Gaps = 8/168 (4%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
           +S N G+AA  A   RL+T++DN++N+ T G++ ++  F  +V A           V + 
Sbjct: 5   SSLNAGVAALSANASRLATISDNIANSSTYGYKRVETDFHALVNASGRGKYTAG-GVRTT 63

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-------LTRDGRFKVTDDGSLV 115
            + L  + GS +ST    D A+ G     +     +        L   G F+  D+G L 
Sbjct: 64  TQRLIDQRGSLVSTSNSTDLAVRGRGMLPVMRSSQLALPQQDMLLATTGSFRTDDEGYLK 123

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
           S +G   +   A+    IP      + G         ++        V
Sbjct: 124 SEAGLVLMGWRANPDGSIPNLPRDTSDGLVPVQLSVNQLSGAPTTEMV 171



 Score = 66.8 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 15/120 (12%), Positives = 37/120 (30%), Gaps = 5/120 (4%)

Query: 125 DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP- 183
           D  +V      + +          +   + +  + L  +    G V  ++    P+    
Sbjct: 309 DGTAVGTMSRVEVDENGFVYAFFDNGVSRRVFQIPLVDMPNPNGLVALDSQTYEPSRESG 368

Query: 184 ----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
                   D     +     E+S  +   E+  MI   + ++S   +I   ++ + E   
Sbjct: 369 TFFLWDAGDGPTGDLVSFAREESTTDVATELTAMIQTQRAYSSSAKVIQTVDEMLQETTN 428


>gi|255262922|ref|ZP_05342264.1| flagellar hook protein FlgE [Thalassiobium sp. R2A62]
 gi|255105257|gb|EET47931.1| flagellar hook protein FlgE [Thalassiobium sp. R2A62]
          Length = 422

 Score = 69.5 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 63/163 (38%), Gaps = 8/163 (4%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
           +S N G+A   A   +L+T++DN++N+ T G++     F  +V    N        V+  
Sbjct: 5   SSLNAGIAGLAANASKLATISDNIANSSTFGYKRAGADFHSLVTGSGNGTYSAG-GVSVT 63

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALES-------PRGIILTRDGRFKVTDDGSLV 115
            + +    GS +ST    D ++ G     + +          ++LT  G F+   +G L 
Sbjct: 64  TQRMVDARGSLVSTSNATDLSISGRGMLPVTNRSGVESGDSAMMLTSTGSFRTDSNGYLT 123

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158
           ++ G   +   A     +P          +     + K +   
Sbjct: 124 TSGGLVLMGVPADGDGVVPTFSRDTQAALQPIKIDRTKFVGEP 166



 Score = 66.0 bits (159), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 13/120 (10%), Positives = 36/120 (30%), Gaps = 5/120 (4%)

Query: 125 DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP- 183
           + + V   I  +     + +    +   + +  + +  V    G         S +    
Sbjct: 300 NGSPVGNMISIEVNEKGIVQGIFDTGTTRALYQVPIVDVPNPNGLKAGNQQTFSISQNSG 359

Query: 184 ----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
                         V     E+S  +   E+ Q+I   + +++   +I   ++ + E   
Sbjct: 360 SFYLWDAGAGPVGDVVSYAREESTTDVAAELTQLIQTQRAYSTNAKVIQTVDEMLQETTN 419


>gi|163742565|ref|ZP_02149951.1| flagellar hook protein FlgE, putative [Phaeobacter gallaeciensis
           2.10]
 gi|161384150|gb|EDQ08533.1| flagellar hook protein FlgE, putative [Phaeobacter gallaeciensis
           2.10]
          Length = 440

 Score = 69.5 bits (168), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 35/143 (24%), Positives = 59/143 (41%), Gaps = 10/143 (6%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
           +S N G+A   A   RL++++DN++N+ T G++ ++  F  +V +           V + 
Sbjct: 12  SSLNAGVAGLTANASRLASISDNIANSSTAGYKRVQTDFHSMVMSSSGGTYSAG-GVRTT 70

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALES---------PRGIILTRDGRFKVTDDGS 113
              L  E G  +ST    D A+ G     + S            ++LT    F+   DG 
Sbjct: 71  NVRLIDERGPLVSTSNATDLAVRGRGMLPVTSMNEVETGAANPQMMLTTTASFRTNADGL 130

Query: 114 LVSASGKYPVLDMASVPIQIPQK 136
           L + SG   +   A     IP  
Sbjct: 131 LATESGLVLMGWPAQSDGTIPPY 153



 Score = 67.6 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 15/120 (12%), Positives = 37/120 (30%), Gaps = 5/120 (4%)

Query: 125 DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP- 183
           D A V      + +          +   +V+  + L  +    G +  +     P+    
Sbjct: 318 DGAPVGNFTGVEIDEAGYVHANYDTGVSRVVYQVPLVDLPNPNGMIAMDRQTYMPSSESG 377

Query: 184 ----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
                   +     +     E+S  +   E+  MI   + ++S   +I   ++ + E   
Sbjct: 378 SYFLWNAGEGPTGDILGYAREESATDVAGELTNMIQTQRAYSSNAKVIQTVDEMLQETTN 437


>gi|213613181|ref|ZP_03371007.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
          Length = 110

 Score = 69.5 bits (168), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 13/98 (13%), Positives = 36/98 (36%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLED 201
             +++ +V+  + L +   ++G   + ++  +                +   +  G LE 
Sbjct: 11  YSNEQEQVLGQIVLANFANNEGLASQGDNVWAATQASGVALLGTAGSGNFGKLTNGALEA 70

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E+  MI   + + S    I   ++ +   + 
Sbjct: 71  SNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 108


>gi|260429561|ref|ZP_05783538.1| flagellar hook protein FlgE [Citreicella sp. SE45]
 gi|260420184|gb|EEX13437.1| flagellar hook protein FlgE [Citreicella sp. SE45]
          Length = 431

 Score = 69.5 bits (168), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 72/202 (35%), Gaps = 9/202 (4%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
           +S N G++       RL+ ++DN++N+ T G+R ++  F+ +V +            +  
Sbjct: 5   SSLNAGVSGLSGNASRLAAISDNIANSSTYGYRRVETDFTALVMSSGTRTYTAG-GTSVD 63

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAW--------FALESPRGIILTRDGRFKVTDDGSL 114
              +  + G+ +ST    D A++G           +       ++LT  G F++ ++G L
Sbjct: 64  NLRVVDQGGALVSTSNATDLAIDGIGMLPVVAVSQYEATGEPELLLTSTGSFRIDENGYL 123

Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174
            S SG Y +   A++   IP        G +                 + ++      + 
Sbjct: 124 ASESGYYLMGWPANLDGTIPNYPRDTINGLEPIQFSLSLTGDPTTSVDMALNLPATATQA 183

Query: 175 SGISPNIPPTPLEDLSGVTVKR 196
                          +    + 
Sbjct: 184 GASGETEYLEIEYFDNVGISQS 205



 Score = 66.8 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 43/120 (35%), Gaps = 5/120 (4%)

Query: 125 DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP- 183
           D +SV   +  + +          S + +V+  + L  +    G +  + S   P+    
Sbjct: 309 DGSSVGNMVSVEVDENGYVSALYDSGQSQVLYQIPLADLPNYNGMIAVDGSTFRPSPESG 368

Query: 184 ----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
                   D    +VK    ++S  +   E+  MI   + ++S   +I   ++ + E   
Sbjct: 369 SFFLWDAGDGPTGSVKSYARQESATDIARELTDMIRTQRAYSSNAKVIQTVDEMLQETTN 428


>gi|163803169|ref|ZP_02197052.1| flagellar hook protein [Vibrio sp. AND4]
 gi|159173069|gb|EDP57902.1| flagellar hook protein [Vibrio sp. AND4]
          Length = 399

 Score = 69.1 bits (167), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 53/132 (40%), Gaps = 6/132 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SFNI L+   A    L+T++ N++N  T GF+  + +F+ V      +  Q      +  
Sbjct: 2   SFNIALSGLDATNTELNTISHNIANASTYGFKGGRTEFAAVY-----NGMQPGGVEVASI 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLVSASGKYP 122
                + GS   TG  +D A+ G  +F  +   G +  TR G F    +  + + +G   
Sbjct: 57  SQNFDKNGSVTGTGRAMDLAINGSGFFVTKDNMGQMLYTRAGVFGTDKNNFVTANNGAKL 116

Query: 123 VLDMASVPIQIP 134
                     + 
Sbjct: 117 QGYSVDNNANLQ 128



 Score = 66.4 bits (160), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 18/134 (13%), Positives = 43/134 (32%), Gaps = 9/134 (6%)

Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172
             VS +            +++     ++     G+   +G+V+    L     +QG  + 
Sbjct: 270 FGVSTNNPNGYTSGELAGVRVEDNGMVYATYTNGQSQLQGQVV----LADFANTQGLSKV 325

Query: 173 ENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
             +  + +            T     +  G LE SN +   E+  ++   + + +    I
Sbjct: 326 SGTSWTQSFSSGAPIMGVPGTGTLGNLTPGALEGSNVDLTSELVALMTAQRNYQANAKTI 385

Query: 228 DENEKSMLEAIRNI 241
             N+K        +
Sbjct: 386 STNDKLTQALFNAV 399


>gi|226327744|ref|ZP_03803262.1| hypothetical protein PROPEN_01617 [Proteus penneri ATCC 35198]
 gi|225203448|gb|EEG85802.1| hypothetical protein PROPEN_01617 [Proteus penneri ATCC 35198]
          Length = 98

 Score = 69.1 bits (167), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 32/89 (35%), Gaps = 3/89 (3%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQ 212
           K++       V    G      +G++      P +D   V V  G LE SN N    M  
Sbjct: 9   KMVKPEQNDLVRGDDGLFHLSPNGVARAGAELPADDS--VKVLAGVLEGSNVNPAEAMVD 66

Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           MI   ++F     +I   + +   A   +
Sbjct: 67  MIANARRFEMQMKVIHSADDNAQRA-NQL 94


>gi|258512707|ref|YP_003186141.1| flagellar basal body rod protein [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
 gi|257479433|gb|ACV59752.1| flagellar basal body rod protein [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
          Length = 403

 Score = 69.1 bits (167), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 30/207 (14%), Positives = 54/207 (26%), Gaps = 10/207 (4%)

Query: 46  GAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGR 105
           G+  +D        A    Y +    ++         A+  D    L +   ++      
Sbjct: 192 GSETDDPYAIRVGNADDMGYHAFLPVNYADANGRSGLAVTRDGALQLNAENVVVDAAGHA 251

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFN----------VGEKGEISQKGKVI 155
               D    V   G+  V  +        Q                   +G+    G++ 
Sbjct: 252 IAPLDAAGRVMVGGRIVVNPLYHGTQIFSQSGTPVYDANGQPSFRVYDAQGQPVAGGRIG 311

Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIH 215
                 +     G       G        PL   S   +  G LE SN N    M QM+ 
Sbjct: 312 LVDADVTQLQPLGEGEYMVGGSYQAAAVEPLLRASTGRMVFGALESSNVNVAATMAQMMQ 371

Query: 216 LTQKFNSITTLIDENEKSMLEAIRNIA 242
               + +   +    +  +  A  +I 
Sbjct: 372 ALNAYEANQRVAQSVDSMLNVAATDIG 398



 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 62/208 (29%), Gaps = 15/208 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTI-----------KVKFSEVVGAIK 49
           M        +   A ++    +++N++N +T GF+               ++S   G+  
Sbjct: 1   MIQGLTAAASGMAAEDRLEQLLSNNLANQETPGFKASIGELIEDPVFAMERYSYGDGSDG 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109
             I +    V   +   S   G   +TG  LD A+               LT  G  K  
Sbjct: 61  IGIGEMGGGVDFQEGVPSFSEGGLETTGRPLDLAIVD---VLSSGEVAYALTPQGA-KPV 116

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169
                V A G+     M      +  +        +    Q  ++++  G  + D +   
Sbjct: 117 AGLVTVGAGGRLTAGGMPLAVYGLDGQPVQGLFAVRNPSYQGSELLSEGGAPAYDAAGRP 176

Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRG 197
                +     +     E      ++ G
Sbjct: 177 SYVFENAAGQVVYTPGSETDDPYAIRVG 204


>gi|39936993|ref|NP_949269.1| flagellar hook protein flgE [Rhodopseudomonas palustris CGA009]
 gi|192292821|ref|YP_001993426.1| hypothetical protein Rpal_4455 [Rhodopseudomonas palustris TIE-1]
 gi|39650850|emb|CAE29373.1| probable flagellar hook protein flgE [Rhodopseudomonas palustris
           CGA009]
 gi|192286570|gb|ACF02951.1| protein of unknown function DUF1078 domain protein
           [Rhodopseudomonas palustris TIE-1]
          Length = 598

 Score = 69.1 bits (167), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 52/132 (39%), Gaps = 12/132 (9%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +    +A   +    L  ++ N++N+ T  F+ I   F +++    N+  Q    V +G 
Sbjct: 6   ALTTSVAGLRSNSYALENISGNIANSQTTAFKRIDTSFLDLIPQAGNN-QQLAGSVTAGS 64

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRG-----------IILTRDGRFKVTDDG 112
              +   GS  S       A+ G+ +F ++ P                TR G F +  +G
Sbjct: 65  RLTNTTQGSVQSASVSTYMAINGEGFFVVQKPSSFSDNNPIFPGVDNFTRRGDFSLDKNG 124

Query: 113 SLVSASGKYPVL 124
            LV+ +G Y   
Sbjct: 125 YLVNGAGYYLEG 136



 Score = 52.9 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 15/120 (12%), Positives = 36/120 (30%)

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                D  S    +               + +   +A + + + + +    R +      
Sbjct: 476 NQLQQDGYSAGQLVSVSVSNDGRVVGAYSNGRNIDLAEVSVATFNGANFLKRTDGGAFEI 535

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
                      G +V    LE SN +   E  ++I   Q +++ T +I      + + + 
Sbjct: 536 TNESGQPLYGKGGSVSGSSLESSNTDIADEFTKLIVTQQAYSANTKVITTANTMVQDLLN 595


>gi|296127542|ref|YP_003634794.1| flagellar basal-body rod protein FlgC [Brachyspira murdochii DSM
           12563]
 gi|296019358|gb|ADG72595.1| flagellar basal-body rod protein FlgC [Brachyspira murdochii DSM
           12563]
          Length = 153

 Score = 69.1 bits (167), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 24/48 (50%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           K G++E  N N + EM  M+  ++ + + +T+I   +     A+  I 
Sbjct: 105 KAGYVEMPNVNPVTEMVDMMEASRAYEANSTMIQSAKTMFGSALNIIR 152



 Score = 56.4 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/122 (16%), Positives = 33/122 (27%), Gaps = 12/122 (9%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKI 56
           +  N   +   A   RL  +ADN++N +T        FR  +V F         D   K 
Sbjct: 5   SIINTSGSGLTAQRTRLDVIADNIANVNTTRTTEGGAFRRSRVIFK------PRDDGNKY 58

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVS 116
                 +               E D        +    P  I       +    + + V+
Sbjct: 59  RSPFLPEALQPNVGTGVRVFSIEKDMETATRFVYDPSHPDAIKYGEKAGYVEMPNVNPVT 118

Query: 117 AS 118
             
Sbjct: 119 EM 120


>gi|300870979|ref|YP_003785850.1| flagellar basal body rod protein FlgC [Brachyspira pilosicoli
           95/1000]
 gi|300688678|gb|ADK31349.1| flagellar basal body rod protein, FlgC [Brachyspira pilosicoli
           95/1000]
          Length = 153

 Score = 69.1 bits (167), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 24/48 (50%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           K G++E  N N + EM  M+  ++ + + +T+I   +     A+  I 
Sbjct: 105 KAGYVEMPNVNPVTEMVDMMEASRAYEANSTMIQSAKTMFGSALNIIR 152



 Score = 56.8 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/122 (16%), Positives = 33/122 (27%), Gaps = 12/122 (9%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKI 56
           +  N   +   A   RL  +ADN++N +T        FR  +V F         D   K 
Sbjct: 5   SIINTSGSGLTAQRTRLDVIADNIANVNTTRTTEGGAFRRSRVVFK------PRDDGNKY 58

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVS 116
                 +               E D        +    P  I       +    + + V+
Sbjct: 59  RSPFLPEALQPNVGTGVRVFSIEKDMETATRFVYDPSHPDAIKYGEKAGYVEMPNVNPVT 118

Query: 117 AS 118
             
Sbjct: 119 EM 120


>gi|225619783|ref|YP_002721040.1| flagellar basal body rod protein FlgC [Brachyspira hyodysenteriae
           WA1]
 gi|225214602|gb|ACN83336.1| flagellar basal body rod protein FlgC [Brachyspira hyodysenteriae
           WA1]
          Length = 153

 Score = 69.1 bits (167), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 24/48 (50%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           K G++E  N N + EM  M+  ++ + + +T+I   +     A+  I 
Sbjct: 105 KAGYVEMPNVNPVTEMVDMMEASRAYEANSTMIQSAKTMFGSALNIIR 152



 Score = 56.4 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/122 (16%), Positives = 32/122 (26%), Gaps = 12/122 (9%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKI 56
           +  N   +   A   RL  +ADN++N +T        FR  +V F         D   K 
Sbjct: 5   SIINTSGSGLTAQRTRLDVIADNIANVNTTRTTEGGAFRRSRVIFK------PRDDGNKY 58

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVS 116
                                 E D        +    P  I       +    + + V+
Sbjct: 59  RSPFLPDALQPNVGTGVRVFSIEKDMETATRFVYDPSHPDAIKYGEKAGYVEMPNVNPVT 118

Query: 117 AS 118
             
Sbjct: 119 EM 120


>gi|86136709|ref|ZP_01055287.1| flagellar hook protein FlgE, putative [Roseobacter sp. MED193]
 gi|85826033|gb|EAQ46230.1| flagellar hook protein FlgE, putative [Roseobacter sp. MED193]
          Length = 388

 Score = 68.7 bits (166), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 20/123 (16%), Positives = 38/123 (30%), Gaps = 5/123 (4%)

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
              D + V   +  + +          S   +VI  + L  V    G    +N    P+ 
Sbjct: 263 VTKDGSEVGTMVGVEVDPQGYVRANYDSGASRVIFKIPLVDVPNLNGLKSLDNQTYLPSS 322

Query: 182 PP-----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                      D     V     E+S  +   E+  MI   + ++S   +I   ++ + E
Sbjct: 323 DSGSYFLWDAGDGPTGEVASYAQEESATDVATELTDMIKTQRAYSSNAKVIQTVDEMLQE 382

Query: 237 AIR 239
              
Sbjct: 383 TTN 385


>gi|238782792|ref|ZP_04626821.1| Flagellar basal body FlaE domain protein [Yersinia bercovieri ATCC
           43970]
 gi|238716215|gb|EEQ08198.1| Flagellar basal body FlaE domain protein [Yersinia bercovieri ATCC
           43970]
          Length = 359

 Score = 68.7 bits (166), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 13/125 (10%), Positives = 32/125 (25%), Gaps = 5/125 (4%)

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                   +  +                 + + +++  + L S     G   + ++    
Sbjct: 233 DRQSTTGYAPGMMNGYTVGDGGEIIASYSNGEQQLLGQVVLSSFTNPGGLSSQGDNCWLE 292

Query: 180 NIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
                          +   +    LE SN +   EM  MI   + + S +  I    + +
Sbjct: 293 TPESGQPVTGISGTGNLGKLSGNKLEASNVDLSKEMVNMIVYQRNYQSNSQTIKTQSELL 352

Query: 235 LEAIR 239
                
Sbjct: 353 QILAN 357


>gi|260574380|ref|ZP_05842384.1| protein of unknown function DUF1078 domain protein [Rhodobacter sp.
           SW2]
 gi|259023276|gb|EEW26568.1| protein of unknown function DUF1078 domain protein [Rhodobacter sp.
           SW2]
          Length = 435

 Score = 68.7 bits (166), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 64/164 (39%), Gaps = 10/164 (6%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS-FVAS 61
           ++ + G+A   A   RL++++DN++N+ T G++     F  +V           +  V +
Sbjct: 5   SALSAGVAGLNANATRLASISDNIANSGTYGYKRASTDFESMVITQAAGAGTYSAGGVRA 64

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALE---------SPRGIILTRDGRFKVTDDG 112
               L  E G+ +ST   LD A+ G     +          +   +++T  G F+   +G
Sbjct: 65  STTRLIDERGALVSTSNALDLAVSGRGMLPVSATAGLGTDLAGTNLMMTTTGSFRPDANG 124

Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156
            L + SG   +   A+    IP        G    +    +   
Sbjct: 125 VLRTQSGLVLLGWPANADGTIPVLPRDTIAGLTPVVINSNQQAG 168



 Score = 64.5 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 12/98 (12%), Positives = 28/98 (28%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLED 201
             +   + +  + L       G +   N     +            D     V     E 
Sbjct: 335 YDTGFTRRLYQIPLVDTPNLNGLIALNNQTYQISPNSGSFFLWDAGDGPTGAVVGYSREG 394

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           S  +   E+  +I   + ++S   +I   ++ + E   
Sbjct: 395 STTDVAAELTNLIQTQRAYSSNAKVIQTVDEMLQETTN 432


>gi|289670509|ref|ZP_06491584.1| flagellar basal body rod protein FlgF [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 141

 Score = 68.7 bits (166), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 47/132 (35%), Gaps = 6/132 (4%)

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
           T +G  V   G  P+       ++I     I  + +         V     +  VD    
Sbjct: 5   TANGHAVLDEGGTPMTIPPHQAMEIGSDGSISIIPQGEGPQTMAIV---GKMKVVDAPAD 61

Query: 169 FVRRENSGISPNIPPTPLEDLSGVT---VKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225
            + R   G+  N    P +  +  T   +  G LE SN ++   + +MI L ++F     
Sbjct: 62  RLTRRPDGLMRNTSTDPAQAFAVATGKTINSGMLEGSNVDAAGALVEMIQLQRQFEMQVK 121

Query: 226 LIDENEKSMLEA 237
           +I   + +   A
Sbjct: 122 IIKNGDDNAQSA 133


>gi|323706570|ref|ZP_08118123.1| protein of unknown function DUF1078 domain protein
           [Thermoanaerobacterium xylanolyticum LX-11]
 gi|323534077|gb|EGB23875.1| protein of unknown function DUF1078 domain protein
           [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 59

 Score = 68.4 bits (165), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 22/55 (40%), Gaps = 1/55 (1%)

Query: 188 DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
                 V++GFLE SN   + EM  MI   + +   +  I   +  +     N+ 
Sbjct: 5   QGRMGNVRQGFLETSNVQVVNEMVNMIAAQRAYELNSKAIQAADDML-SIANNLR 58


>gi|146341767|ref|YP_001206815.1| flagellar hook protein FlgE [Bradyrhizobium sp. ORS278]
 gi|146194573|emb|CAL78598.1| putative flagellar hook protein FlgE [Bradyrhizobium sp. ORS278]
          Length = 415

 Score = 68.4 bits (165), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 50/118 (42%), Gaps = 4/118 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           + +  ++A  A    L+ ++DN+SN DT G++T    F ++V A  +        V+   
Sbjct: 6   ALSSAISALNAQSSSLAMISDNISNADTTGYKTTSGLFEQLVTASSSSKAYSSGGVSVSG 65

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALES----PRGIILTRDGRFKVTDDGSLVSA 117
                + G   +T    D A++G  +F   S          TR+G F   + G + + 
Sbjct: 66  RSNITQQGLLAATTNATDVAIQGSGFFVATSSTAAGGETFYTRNGAFTTDNAGYIENN 123



 Score = 48.3 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 12/101 (11%), Positives = 32/101 (31%), Gaps = 5/101 (4%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLED 201
             + +   I  + + +     G V   +   +              +    T+    LE 
Sbjct: 315 YSNGQTVPIYKIAVATFADPNGLVAHSSGMYTSTATSGNATLQASGENGAGTIYGSELES 374

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  ++  +   MI   Q +++ + ++    K     I ++ 
Sbjct: 375 STTDTTGQFSNMISAQQAYSAASQVVSAVNKMYDTLISSMR 415


>gi|218290052|ref|ZP_03494219.1| flagellar basal body rod protein [Alicyclobacillus acidocaldarius
           LAA1]
 gi|218239886|gb|EED07074.1| flagellar basal body rod protein [Alicyclobacillus acidocaldarius
           LAA1]
          Length = 403

 Score = 68.4 bits (165), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 33/125 (26%)

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177
            G        +       +        +G     G++       +     G       G 
Sbjct: 274 HGTQIFSQSGTPVYDANGQPSFRVYDAQGNPVAGGRIGLVDADVAGLQPLGEGEYMVGGS 333

Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                  PL   S   +  G LE SN N    M QM+     + +   +    +  +  A
Sbjct: 334 YQAAAVEPLLRASTGRMVFGALESSNVNVAATMAQMMQALNAYEANQRVAQSVDSMLNVA 393

Query: 238 IRNIA 242
             +I 
Sbjct: 394 ATDIG 398



 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 61/208 (29%), Gaps = 15/208 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTI-----------KVKFSEVVGAIK 49
           M        +   A ++    +++N++N +T GF+               ++S   G+  
Sbjct: 1   MIQGLTAAASGMAAEDRLEQLLSNNLANQETPGFKASIGELIEDPVFAMERYSYGDGSDG 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109
             I +    V   +   S   G   +TG  LD A+               LT  G  K  
Sbjct: 61  IGIGEMGGGVDFQEGVPSFSEGGLETTGRPLDLAIVDTI---SSGEVAYALTPQGA-KPA 116

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169
                V A G+     M         +        +    Q  ++++  G  + D S   
Sbjct: 117 AGPVTVGAGGRLTAGGMPLAVYGPDGQPVQGLFAVRNPSYQGSELLSEGGAPAYDASGRP 176

Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRG 197
                +     +     E      ++ G
Sbjct: 177 SYVFENAAGQVVYTPGSETDDPYAIRVG 204


>gi|213025696|ref|ZP_03340143.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
          enterica serovar Typhi str. 404ty]
          Length = 93

 Score = 68.4 bits (165), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 33/93 (35%), Gaps = 13/93 (13%)

Query: 14 ALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------------QKISFVA 60
          A +  +  +A+N++N  T GF+  +  F +++                     Q  + V 
Sbjct: 1  AQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQTTLPSGLQIGTGVR 60

Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALE 93
                    G+   T    D A++G  +F + 
Sbjct: 61 PVATERLHSQGNLSQTNNSKDVAIKGQGFFQVM 93


>gi|296120817|ref|YP_003628595.1| flagellar basal body rod protein-like protein [Planctomyces
           limnophilus DSM 3776]
 gi|296013157|gb|ADG66396.1| Flagellar basal body rod protein-like protein [Planctomyces
           limnophilus DSM 3776]
          Length = 521

 Score = 68.4 bits (165), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 69/207 (33%), Gaps = 15/207 (7%)

Query: 12  QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
              L         NM+   T+G+R   V        +++        V +    +    G
Sbjct: 292 IRVLRAAQHIHRQNMAQAKTIGYRRRVV-------QLQSHGTPLADQVPTLSTTIDPTPG 344

Query: 72  SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPI 131
            +I T   LD A++G  WF +   +  +LTR G     ++  L    G         +  
Sbjct: 345 EWIITERPLDLAIQGYGWFVVRHDQQQLLTRVGHLVWNENRQLAIEIGTRSYPLDPPIVA 404

Query: 132 QIPQKDEIFNVGEKGEISQKGKVIATMG---LYSVDMSQGFVRRENSGISP-----NIPP 183
                  +       + +  G  ++++G   + +V  +   + +     +      N+  
Sbjct: 405 PEGCTQLLIEETGNVQAATAGSELSSLGVITMATVPDATQLLEKLPGLFATTGKSGNLTF 464

Query: 184 TPLEDLSGVTVKRGFLEDSNANSMYEM 210
              E      +  G LE SN NS  E+
Sbjct: 465 HTAETARSGKLIAGRLEQSNVNSELEL 491


>gi|288958564|ref|YP_003448905.1| flagellar hook protein [Azospirillum sp. B510]
 gi|288910872|dbj|BAI72361.1| flagellar hook protein [Azospirillum sp. B510]
          Length = 881

 Score = 68.4 bits (165), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 10/100 (10%), Positives = 35/100 (35%), Gaps = 5/100 (5%)

Query: 144 EKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGF 198
                + + ++IA + + + +      R        +           +      +    
Sbjct: 778 MVNYDNGRSRMIAKVPIVTFNNPNALQRESGGVFVESEGAGKPNLNDPKLNGAGAMVANS 837

Query: 199 LEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           +E SN +   E  +MI   + +++   ++  +++ + E +
Sbjct: 838 VEASNVDIASEFTKMIVTQRGYSANAKVLTASDEMLQEVL 877



 Score = 67.6 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/142 (16%), Positives = 54/142 (38%), Gaps = 20/142 (14%)

Query: 7   IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66
             L   +A  + L  ++DN++N  T G++ +   F  +V    +  +     V +   ++
Sbjct: 9   SALMGLVAQSKALGNISDNIANASTAGYKRVDTTFQSMVLQ-SSPRNHAPGGVTARPSFM 67

Query: 67  SKEVGSFISTGTELDFALEGDAWFALES-------------------PRGIILTRDGRFK 107
           +   G+  S  +    A++G  +F++                         + TR G F+
Sbjct: 68  NDVQGNLTSVSSNTSAAIQGQGFFSVSRLDAQTAGTIGGATGGGATGSGPNVYTRLGDFQ 127

Query: 108 VTDDGSLVSASGKYPVLDMASV 129
           ++    LV++SG      +   
Sbjct: 128 LSRTRHLVNSSGFALNGWLVDP 149


>gi|148254600|ref|YP_001239185.1| flagellar hook protein FlgE [Bradyrhizobium sp. BTAi1]
 gi|146406773|gb|ABQ35279.1| putative flagellar hook protein FlgE [Bradyrhizobium sp. BTAi1]
          Length = 412

 Score = 68.0 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 51/118 (43%), Gaps = 4/118 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           + +  ++A  A    L+ ++DN+SN DT G++T    F ++V A  N        V+   
Sbjct: 6   ALSSAISALNAQSSSLAMISDNISNADTTGYKTTSGLFEQLVTASSNSKAYSSGGVSVSS 65

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWF----ALESPRGIILTRDGRFKVTDDGSLVSA 117
                + G   +T    D A++G  +F    +  +      TR+G F   + G L + 
Sbjct: 66  RTNITQQGLLATTTNATDVAIQGSGFFVATDSTSAGGETFYTRNGAFTTDNAGYLENN 123



 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/101 (13%), Positives = 32/101 (31%), Gaps = 5/101 (4%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLED 201
             + +   I  + + +     G V   N   +              +    T+    LE 
Sbjct: 312 YSNGQTVPIYKIAVATFADPNGLVAHSNGMYTATATSGNATLQASGENGAGTIYGSELES 371

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  ++  +   MI   Q +++ + +I    K     I ++ 
Sbjct: 372 STTDTTGQFSNMISAQQAYSAASQVISAVNKMYDTLISSMR 412


>gi|219684534|ref|ZP_03539477.1| flagellar basal-body rod protein FlgC [Borrelia garinii PBr]
 gi|219685765|ref|ZP_03540576.1| flagellar basal-body rod protein FlgC [Borrelia garinii Far04]
 gi|219671896|gb|EED28950.1| flagellar basal-body rod protein FlgC [Borrelia garinii PBr]
 gi|219672704|gb|EED29732.1| flagellar basal-body rod protein FlgC [Borrelia garinii Far04]
          Length = 152

 Score = 68.0 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 26/47 (55%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           G++E  N N + EM  MI  ++ + + +T+I+ ++     A+  + S
Sbjct: 106 GYVELPNVNLVEEMVDMISASRAYEANSTVINSSKSMFRSALAILQS 152



 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 22/46 (47%), Gaps = 6/46 (13%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFS 42
          +S N+      A   R+  +++N++N  T     G  +R  ++ F+
Sbjct: 5  SSINVASTGLTAQRLRIDVISNNIANVSTSRTPDGGPYRRQRIIFA 50


>gi|114799551|ref|YP_758981.1| flagellar hook protein FlgE [Hyphomonas neptunium ATCC 15444]
 gi|114739725|gb|ABI77850.1| flagellar hook protein FlgE [Hyphomonas neptunium ATCC 15444]
          Length = 434

 Score = 68.0 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/165 (22%), Positives = 60/165 (36%), Gaps = 10/165 (6%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
           +S N G+        RL+T++DN++N+ T G++   V FS +V   K         V   
Sbjct: 5   SSLNAGVMGLSVNGTRLATISDNIANSGTYGYKRSAVDFSSMVLQQKTSAYAAG-GVRVD 63

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALES---------PRGIILTRDGRFKVTDDGS 113
                   GS I TG+  D A+ G     +            R ++LT  G F   ++G 
Sbjct: 64  TYKDIAATGSLIRTGSATDVAISGRGLLPVTDLDGTTNLASNRNMMLTPTGSFFADENGY 123

Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158
           L + SG + +   A     +                   +  AT 
Sbjct: 124 LRTQSGLFLLGWAADSSGGVGNVSRNSGANLVPVNISTSQFNATP 168



 Score = 62.2 bits (149), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 21/205 (10%), Positives = 56/205 (27%), Gaps = 12/205 (5%)

Query: 43  EVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTR 102
           +  G     +               +   +  + G   D A    +      P  + + R
Sbjct: 231 DSAGDPLTSVGDLALTFNDSPTAGGRIASATAANGATYDPATGRVSLTLDHGPVEVFIGR 290

Query: 103 ---DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG 159
                           +A  K          I+I ++  +  + +KG      + +  + 
Sbjct: 291 PNDSAGITQLAASFAPTAVTKNGSPIGDLQSIEIDEQGFLQAIYDKGFR----RTLYQIP 346

Query: 160 LYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMI 214
           +  V    G    ++   S +                  +    L +S  +   E+  +I
Sbjct: 347 VGDVPNMNGLRALDSQAYSVSNSSGNLYLWDAGSGPVGGISGYSLMESTTDIASELTDLI 406

Query: 215 HLTQKFNSITTLIDENEKSMLEAIR 239
              + ++S   ++   ++ + E   
Sbjct: 407 ETQRAYSSNAKIVQTVDEMLQETTN 431


>gi|15639388|ref|NP_218837.1| flagellar basal body rod protein FlgC [Treponema pallidum subsp.
           pallidum str. Nichols]
 gi|189025630|ref|YP_001933402.1| flagellar basal body rod protein FlgC [Treponema pallidum subsp.
           pallidum SS14]
 gi|3322680|gb|AAC65385.1| flagellar basal-body rod protein (flgC) [Treponema pallidum subsp.
           pallidum str. Nichols]
 gi|189018205|gb|ACD70823.1| flagellar basal-body rod protein [Treponema pallidum subsp.
           pallidum SS14]
          Length = 129

 Score = 67.6 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 30/67 (44%)

Query: 172 RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
            +++  S  +      D      K G++E  N + + EM  +I  ++ + +  ++I  ++
Sbjct: 59  EKDNAPSRLVYDPTHPDAILSGPKAGYVEYPNVDIVTEMVDLISASRAYEANISVISGSK 118

Query: 232 KSMLEAI 238
           +    A+
Sbjct: 119 EMFQRAL 125


>gi|330721008|gb|EGG99169.1| Flagellar hook protein FlgE [gamma proteobacterium IMCC2047]
          Length = 92

 Score = 67.6 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 12/90 (13%), Positives = 33/90 (36%), Gaps = 5/90 (5%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYE 209
           +  +GL +    +G   + N+  +           +  +     ++ G LE+SN +   E
Sbjct: 1   MGQVGLANFSNVEGLSPQGNTQWAETFDSGNPVVGTPGSASLGVLQSGALEESNVDLSAE 60

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +  +I   + + +    I+         ++
Sbjct: 61  LVSLILAQRNYQANARAIETESAVTQAILQ 90


>gi|224531802|ref|ZP_03672434.1| flagellar basal-body rod protein FlgC [Borrelia valaisiana VS116]
 gi|224511267|gb|EEF81673.1| flagellar basal-body rod protein FlgC [Borrelia valaisiana VS116]
          Length = 152

 Score = 67.6 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 26/47 (55%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           G++E  N N + EM  MI  ++ + + +T+I+ ++     A+  + S
Sbjct: 106 GYVELPNVNLVEEMVDMISASRAYEANSTVINSSKSMFRSALAILQS 152



 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 22/46 (47%), Gaps = 6/46 (13%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFS 42
          +S N+      A   R+  +++N++N  T     G  +R  ++ F+
Sbjct: 5  SSINVASTGLTAQRLRIDVISNNIANVSTSRTPDGGPYRRQRIIFA 50


>gi|224534284|ref|ZP_03674862.1| flagellar basal-body rod protein FlgC [Borrelia spielmanii A14S]
 gi|224514386|gb|EEF84702.1| flagellar basal-body rod protein FlgC [Borrelia spielmanii A14S]
          Length = 152

 Score = 67.6 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 26/47 (55%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           G++E  N N + EM  MI  ++ + + +T+I+ ++     A+  + S
Sbjct: 106 GYVELPNVNLVEEMVDMISASRAYEANSTVINSSKSMFRSALAILQS 152



 Score = 54.1 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 22/46 (47%), Gaps = 6/46 (13%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFS 42
          +S N+      A   R+  +++N++N  T     G  +R  ++ F+
Sbjct: 5  SSINVASTGLTAQRLRIDVISNNIANVSTSRTPDGGPYRRQRIIFA 50


>gi|216264021|ref|ZP_03436015.1| flagellar basal-body rod protein FlgC [Borrelia afzelii ACA-1]
 gi|215980065|gb|EEC20887.1| flagellar basal-body rod protein FlgC [Borrelia afzelii ACA-1]
          Length = 152

 Score = 67.6 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 26/47 (55%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           G++E  N N + EM  MI  ++ + + +T+I+ ++     A+  + S
Sbjct: 106 GYVELPNVNLVEEMVDMISASRAYEANSTVINSSKSMFRSALAILQS 152



 Score = 54.1 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 22/46 (47%), Gaps = 6/46 (13%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFS 42
          +S N+      A   R+  +++N++N  T     G  +R  ++ F+
Sbjct: 5  SSINVASTGLTAQRLRIDVISNNIANVSTSRTPDGGPYRRQRIIFA 50


>gi|111115118|ref|YP_709736.1| flagellar basal body rod protein FlgC [Borrelia afzelii PKo]
 gi|110890392|gb|ABH01560.1| flagellar basal-body rod protein [Borrelia afzelii PKo]
          Length = 152

 Score = 67.6 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 26/47 (55%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           G++E  N N + EM  MI  ++ + + +T+I+ ++     A+  + S
Sbjct: 106 GYVELPNVNLVEEMVDMISASRAYEANSTVINSSKSMFRSALAILQS 152



 Score = 54.1 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 22/46 (47%), Gaps = 6/46 (13%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFS 42
          +S N+      A   R+  +++N++N  T     G  +R  ++ F+
Sbjct: 5  SSINVASTGLTAQRLRIDVISNNIANVSTSRTPDGGPYRRQRIIFA 50


>gi|1448943|gb|AAB04619.1| flagellar basal body distal rod protein [Borrelia burgdorferi]
          Length = 152

 Score = 67.6 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 24/42 (57%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++E  N N + EM  MI  ++ + + +T+I+ ++     A+
Sbjct: 106 GYVELPNVNLVEEMVDMISASRAYEANSTVINSSKSMFRSAL 147



 Score = 51.0 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 7/29 (24%), Positives = 15/29 (51%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDT 31
          +S N+      A   R+  +++N++N  T
Sbjct: 5  SSINVASTGLTAQRLRIDVISNNIANVST 33


>gi|225552253|ref|ZP_03773193.1| flagellar basal-body rod protein FlgC [Borrelia sp. SV1]
 gi|225371251|gb|EEH00681.1| flagellar basal-body rod protein FlgC [Borrelia sp. SV1]
          Length = 152

 Score = 67.2 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 24/42 (57%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++E  N N + EM  MI  ++ + + +T+I+ ++     A+
Sbjct: 106 GYVELPNVNLVEEMVDMISASRAYEANSTVINSSKSMFRSAL 147



 Score = 54.1 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 22/46 (47%), Gaps = 6/46 (13%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFS 42
          +S N+      A   R+  +++N++N  T     G  +R  ++ F+
Sbjct: 5  SSINVASTGLAAQRLRIDVISNNIANVSTSRTPDGGPYRRQRIIFA 50


>gi|170737038|ref|YP_001778298.1| flagellar basal body FlaE domain-containing protein [Burkholderia
           cenocepacia MC0-3]
 gi|169819226|gb|ACA93808.1| flagellar basal body FlaE domain protein [Burkholderia cenocepacia
           MC0-3]
          Length = 389

 Score = 67.2 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 12/92 (13%), Positives = 31/92 (33%), Gaps = 5/92 (5%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRG-----FLEDSNANSMYE 209
              + + +     G V  + SG   +            T   G      +E SN +   E
Sbjct: 298 AGQLAIATFQNENGLVPVDGSGWQASSATGEPLIGKPGTGMAGKLAVRAVEQSNVDMTAE 357

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           +  ++   Q + + + ++    + M   ++ +
Sbjct: 358 LVSLMGAQQNYQANSKVLSTENEMMRALMQAL 389



 Score = 62.2 bits (149), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 56/124 (45%), Gaps = 6/124 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SFNI LA   A+  +L+ +++N++N+ T+GF++ +  F+              S   S  
Sbjct: 2   SFNIALAGINAINGQLNQISNNIANSGTLGFKSGRANFASSYINAMPSGVSIGSTSQSMD 61

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWF-ALESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
              +       +TG  LD A+ G  +F + ++   ++ +R G F +  +G++     +  
Sbjct: 62  VTGNF-----SATGRGLDAAIAGKGFFISRDTDGSMVFSRAGVFNIDKNGNVTDFMSRVV 116

Query: 123 VLDM 126
               
Sbjct: 117 QGYG 120


>gi|15594638|ref|NP_212427.1| flagellar basal body rod protein FlgC [Borrelia burgdorferi B31]
 gi|195941353|ref|ZP_03086735.1| flagellar basal body rod protein FlgC [Borrelia burgdorferi 80a]
 gi|216264936|ref|ZP_03436928.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 156a]
 gi|218249308|ref|YP_002374816.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi ZS7]
 gi|221217671|ref|ZP_03589139.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 72a]
 gi|223888936|ref|ZP_03623527.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 64b]
 gi|224533191|ref|ZP_03673791.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi
           WI91-23]
 gi|224533682|ref|ZP_03674270.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi
           CA-11.2a]
 gi|225549042|ref|ZP_03770017.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 94a]
 gi|225550067|ref|ZP_03771027.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 118a]
 gi|226320594|ref|ZP_03796154.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 29805]
 gi|2494521|sp|Q57466|FLGC_BORBU RecName: Full=Flagellar basal-body rod protein flgC
 gi|1165277|gb|AAA85616.1| FlgC [Borrelia burgdorferi]
 gi|1196316|gb|AAB51408.1| flagellar basal body rod protein [Borrelia burgdorferi]
 gi|2688173|gb|AAC66655.1| flagellar basal-body rod protein (flgC) [Borrelia burgdorferi B31]
 gi|215981409|gb|EEC22216.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 156a]
 gi|218164496|gb|ACK74557.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi ZS7]
 gi|221192348|gb|EEE18567.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 72a]
 gi|223885752|gb|EEF56851.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 64b]
 gi|224511918|gb|EEF82319.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi
           WI91-23]
 gi|224512975|gb|EEF83338.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi
           CA-11.2a]
 gi|225369179|gb|EEG98632.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 118a]
 gi|225370268|gb|EEG99706.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 94a]
 gi|226234013|gb|EEH32734.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 29805]
 gi|312147876|gb|ADQ30535.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi JD1]
 gi|312149272|gb|ADQ29343.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi N40]
          Length = 152

 Score = 67.2 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 24/42 (57%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++E  N N + EM  MI  ++ + + +T+I+ ++     A+
Sbjct: 106 GYVELPNVNLVEEMVDMISASRAYEANSTVINSSKSMFRSAL 147



 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 22/46 (47%), Gaps = 6/46 (13%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFS 42
          +S N+      A   R+  +++N++N  T     G  +R  ++ F+
Sbjct: 5  SSINVASTGLTAQRLRIDVISNNIANVSTSRTPDGGPYRRQRIIFA 50


>gi|226321611|ref|ZP_03797137.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi Bol26]
 gi|226232800|gb|EEH31553.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi Bol26]
          Length = 152

 Score = 67.2 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 24/42 (57%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++E  N N + EM  MI  ++ + + +T+I+ ++     A+
Sbjct: 106 GYVELPNVNLVEEMVDMISASRAYEANSTVINSSKSMFRSAL 147



 Score = 54.1 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 22/46 (47%), Gaps = 6/46 (13%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFS 42
          +S N+      A   R+  +++N++N  T     G  +R  ++ F+
Sbjct: 5  SSINVASTGLTAQRLRIDVISNNIANVSTSRTPDGGPYRRQRIIFA 50


>gi|315301942|ref|ZP_07872943.1| flagellar hook protein FlgE [Listeria ivanovii FSL F6-596]
 gi|313629684|gb|EFR97816.1| flagellar hook protein FlgE [Listeria ivanovii FSL F6-596]
          Length = 342

 Score = 67.2 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 21/175 (12%), Positives = 44/175 (25%), Gaps = 8/175 (4%)

Query: 72  SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPI 131
           ++ + G   + A   +           I   D    ++   +  +     P  D      
Sbjct: 170 NYNAQGELTNAAALRNIQINTTVNGKQI---DMDLNLSGLTNYGTNQVFSPTSDGKGAAT 226

Query: 132 QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-- 189
                                  +A + + +     G V+  N    P +          
Sbjct: 227 VKDYAITDSGYIAVSYSDGTVIPVAQLAVATFSNEDGLVKMGNGEYVPGLSSGDAVYGVA 286

Query: 190 ---SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
                  +    LE SN +   E   ++     F   T +I   +  M + +  I
Sbjct: 287 GQNGAGGISGSSLEGSNVDLSREFVNLMTYQSGFQGNTKVIRVADDVMKQIVNLI 341


>gi|307748584|gb|ADN91854.1| Hypothetical protein CJM1_1678 [Campylobacter jejuni subsp. jejuni
           M1]
          Length = 88

 Score = 67.2 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 12/83 (14%), Positives = 30/83 (36%), Gaps = 5/83 (6%)

Query: 162 SVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHL 216
           SV  + G      +          +      T     +K   LE SN +    + ++I +
Sbjct: 3   SVANNSGLEEIGGNLFKVTANSGNIVVGEAGTGGRGEMKTSALEMSNVDLSRSLTELIII 62

Query: 217 TQKFNSITTLIDENEKSMLEAIR 239
            + + + +  I  +++ +   I+
Sbjct: 63  QRGYQANSKTISTSDQMLQTLIQ 85


>gi|255592000|ref|XP_002535648.1| Flagellar basal-body rod protein flgG, putative [Ricinus communis]
 gi|223522414|gb|EEF26735.1| Flagellar basal-body rod protein flgG, putative [Ricinus communis]
          Length = 230

 Score = 67.2 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 43/216 (19%), Positives = 65/216 (30%), Gaps = 17/216 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV---------------- 44
           MQ    + L +     QRL     N++N  T G++   V    +                
Sbjct: 1   MQEVLALALQSMQQDMQRLDRTGLNLANALTPGYQREVVSARPLRLGAPSFAAMVGTAAA 60

Query: 45  -VGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103
              A         +  A          G+  STG  LD AL G  +F + +P G   TR 
Sbjct: 61  AAVADNAPAASPHAPAAGLLVQTDHRPGTLRSTGQNLDVALAGAGYFEVSTPGGPAYTRQ 120

Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
           G F++   G LV+A G   +     + +Q  Q                        L  V
Sbjct: 121 GSFRLDAQGRLVTAQGHAVMGRGGEILLQSSQVRIDAQGNIFDGDGVGRTDRPVAQLKVV 180

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFL 199
           +  Q    R       +I   P +        +  L
Sbjct: 181 EAPQPSQLRRLGEGLMSIDGQPGQLADADIRIQQAL 216


>gi|34497159|ref|NP_901374.1| flagellar hook protein flgE [Chromobacterium violaceum ATCC 12472]
 gi|34103016|gb|AAQ59379.1| flagellar hook protein flgE [Chromobacterium violaceum ATCC 12472]
          Length = 393

 Score = 66.8 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 11/100 (11%), Positives = 34/100 (34%), Gaps = 5/100 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLED 201
             + + +V+A + + +            +    +    P       +     +    LE 
Sbjct: 294 YSNDQKQVVARLAIANFANQGALTAASQTSWQESSASGPALLSPAGSNMAGKLVTSSLEQ 353

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           SN +   E+  ++   + + + T +I    + M   ++ +
Sbjct: 354 SNVDVTSELVSLMTAQRNYQANTKVISTENQVMQALMQAV 393



 Score = 66.0 bits (159), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 6/125 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           SF I L+   A+  +L +V+DN++N+ T GF++ +V F+           Q +   A+  
Sbjct: 2   SFEIALSGINAVNNQLGSVSDNIANSGTYGFKSGRVTFASAYA-----GSQAMGVNANPN 56

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASGKYP 122
                  G  ++TG  LD A++G  ++   S    +  +R G F    DG LV   G   
Sbjct: 57  SQNIGRNGGLVNTGRALDAAIDGRGFYVSRSVAGAVSYSRVGIFDTDKDGYLVDNYGGRV 116

Query: 123 VLDMA 127
                
Sbjct: 117 QGYAQ 121


>gi|203284214|ref|YP_002221954.1| flagellar basal-body rod protein [Borrelia duttonii Ly]
 gi|203287753|ref|YP_002222768.1| flagellar basal-body rod protein [Borrelia recurrentis A1]
 gi|201083657|gb|ACH93248.1| flagellar basal-body rod protein [Borrelia duttonii Ly]
 gi|201084973|gb|ACH94547.1| flagellar basal-body rod protein [Borrelia recurrentis A1]
          Length = 154

 Score = 66.8 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 25/45 (55%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           G++E  N N + EM  MI  ++ + + +++I+ ++     A+  +
Sbjct: 108 GYVEFPNVNVVEEMVDMISASRAYEANSSVINSSKSMFRSALSIL 152



 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 21/46 (45%), Gaps = 6/46 (13%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFS 42
          +S N       A   RL  +A+N++N +T        +R  ++ F+
Sbjct: 7  SSINTASTGLTAQRLRLDVIANNIANVETTRTADGGAYRRERIIFA 52


>gi|330943209|gb|EGH45616.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           pisi str. 1704B]
          Length = 101

 Score = 66.8 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 44/103 (42%), Gaps = 3/103 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     + ++            A+N++N  T GF     +   +   +  ++    ++  
Sbjct: 1   MDKLLYVAMSGASENAIAQKAHANNLANVSTNGFMRDLEQARSM--PVFGEVMPSRAYAM 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTR 102
           S +       G+ + TG ELD A++GD W A+++P  G   TR
Sbjct: 59  SERPGTDFSAGAMVQTGRELDIAVKGDGWIAVQTPDGGEAYTR 101


>gi|255323568|ref|ZP_05364698.1| flagellar hook protein [Campylobacter showae RM3277]
 gi|255299282|gb|EET78569.1| flagellar hook protein [Campylobacter showae RM3277]
          Length = 543

 Score = 66.8 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 20/137 (14%), Positives = 44/137 (32%), Gaps = 10/137 (7%)

Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV--IATMGLYSVDMSQGF 169
           G   ++  K   +    V   I +     + G        G+V  +  + LY     QG 
Sbjct: 403 GVTSTSQAKSISIAQDGVREGILKDYYTNDSGNILAQFTNGQVRSVGKVALYHFQNEQGL 462

Query: 170 VRRENSGISPNIPPTPLEDLSGV--------TVKRGFLEDSNANSMYEMGQMIHLTQKFN 221
            +  ++  S +                     +    LE SN +    + ++I   + ++
Sbjct: 463 AKMGDNIYSQSANSGAAFFYKDAGGKSIYGAKLASSMLEQSNVDLAQALTEVIVTQKAYD 522

Query: 222 SITTLIDENEKSMLEAI 238
           +    I  + + +  AI
Sbjct: 523 ANAKSITTSNEMLQRAI 539



 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 45/209 (21%), Positives = 75/209 (35%), Gaps = 9/209 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI----KNDIDQKI 56
           M  S   G++        +   A+N++N + VGF     +F  +         N+  Q  
Sbjct: 1   MVRSLYNGVSGVRTQGFSMDVWANNIANINNVGFTASIPEFKSIFYQTSFAAGNNPTQDQ 60

Query: 57  SFVASGKEYL---SKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113
             + +          + G F+ T   LD A+ G  +F + +  G   TR G F V  +  
Sbjct: 61  VGLGATGMTTALSFYKQGPFMKTDNVLDMAIGGKGFFGVTNGSGTYYTRAGSFGVDKERY 120

Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRE 173
           LV+  G Y  L   +   Q+           +           T+G  + D+  G +  +
Sbjct: 121 LVTNQGNYV-LGTQNTLTQVTPSQGAIEAFGRVNGRAAVTQAYTLGADTTDLDVGDIGSQ 179

Query: 174 NSGISPNIPPTPLEDLSGVTVKRGFLEDS 202
                P     P +  S VT K G L+ S
Sbjct: 180 GKIRLPEFLYLPTKPTSKVTFK-GNLDSS 207


>gi|24459279|gb|AAL86632.1| FlgG [Vibrio fischeri ES114]
          Length = 43

 Score = 66.4 bits (160), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 23/43 (53%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
          M  +  +      A +  ++T+++N++N  TVGF+  +  F +
Sbjct: 1  MNPALWVSKTGLDAQQTNIATISNNLANASTVGFKKSRAVFED 43


>gi|328545575|ref|YP_004305684.1| FlgE protein [polymorphum gilvum SL003B-26A1]
 gi|326415316|gb|ADZ72379.1| FlgE protein [Polymorphum gilvum SL003B-26A1]
          Length = 418

 Score = 66.4 bits (160), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 61/165 (36%), Gaps = 7/165 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           + N  +++  A  Q LS V+ N++N+ T  ++     F+ +V             V +  
Sbjct: 6   ALNSAISSLYAQSQALSNVSSNLANSQTTAYKASSTSFTSLVA---GTTSSSSGGVVAST 62

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWF---ALESPRGIILTRDGRFKVTDDGSLVSASGK 120
                E G  +S+ +    A+EG  +F   +  S      TR+G F++  +G  ++  G 
Sbjct: 63  RSSVSEQGLLVSSSSSTHLAIEGSGFFVVSSEVSGGQTYYTRNGEFEIDANG-YLTNGGY 121

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           Y +                 ++      S K  V AT  +     
Sbjct: 122 YLLGWATDASGNPVAGTSEASLVPIDVDSVKSSVGATSNVTMQAN 166



 Score = 56.0 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 12/97 (12%), Positives = 37/97 (38%), Gaps = 5/97 (5%)

Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNAN 205
           + +VI  + + +   + G     N   + +                 T+  G+LE S  +
Sbjct: 322 EQRVIYKIPVATFPNANGLTEMSNGIYARSSYSGNSTLHLAGTGGVGTINGGYLEASTTD 381

Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           +  E  +M+   Q +++ + ++  + +     ++ + 
Sbjct: 382 TSTEFSRMLTAQQAYSAASQILSASNEMFQSLMQAVR 418


>gi|187918167|ref|YP_001883730.1| flagellar basal body rod protein FlgC [Borrelia hermsii DAH]
 gi|119861015|gb|AAX16810.1| flagellar basal-body rod protein FlgC [Borrelia hermsii DAH]
          Length = 152

 Score = 66.4 bits (160), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 26/45 (57%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           G++E  N N++ EM  MI  ++ + + +T+I+ ++     A+  +
Sbjct: 106 GYVEFPNVNAVEEMVDMISASRAYEANSTVINSSKSMFRSALSIL 150



 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 6/46 (13%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFS 42
          +S N       A   RL  +A+N++N +T        +R  +V F+
Sbjct: 5  SSINTASTGLTAQRLRLDVIANNIANVETTRTSEGGSYRRQRVIFA 50


>gi|51598553|ref|YP_072741.1| flagellar basal body rod protein FlgC [Borrelia garinii PBi]
 gi|51573124|gb|AAU07149.1| flagellar basal-body rod protein [Borrelia garinii PBi]
          Length = 152

 Score = 66.0 bits (159), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 26/47 (55%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           G++E  N N + EM  MI  ++ + + +T+++ ++     A+  + S
Sbjct: 106 GYVELPNVNLVEEMVDMISASRAYEANSTVVNSSKSMFRSALAILQS 152



 Score = 54.1 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 22/46 (47%), Gaps = 6/46 (13%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFS 42
          +S N+      A   R+  +++N++N  T     G  +R  ++ F+
Sbjct: 5  SSINVASTGLTAQRLRIDVISNNIANVSTSRTPDGGPYRRQRIIFA 50


>gi|255028363|ref|ZP_05300314.1| flagellar basal body rod protein FlgG [Listeria monocytogenes LO28]
          Length = 217

 Score = 66.0 bits (159), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 60/181 (33%), Gaps = 14/181 (7%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV--------VGAIKNDID 53
                IG A  +   Q +   ++N++N  T GF+  ++    +         G +   + 
Sbjct: 1   MKGLYIGAAGMMNYMQHIQVHSNNVANAQTPGFKFDQLTSEVISRNKVNYQNGPVTRQVG 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFAL------EGDAWFALESPRGIILTRDGRFK 107
                V     +++   GS   T  + DF +      +G  +F       I L+R G+F 
Sbjct: 61  TIDYGVRPAATHINLTAGSSYITNRDRDFFMQDTDPTQGSNFFITAKNGEISLSRGGQFH 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
               G L +A G   +           +             ++  + +  +G   V  +Q
Sbjct: 121 SDQFGFLRTADGANLLSATGEAIQVGQKTSIRAEANGDLYNAETSQYLGRLGTKFVSANQ 180

Query: 168 G 168
            
Sbjct: 181 A 181


>gi|304321120|ref|YP_003854763.1| putative flagellar hook protein [Parvularcula bermudensis HTCC2503]
 gi|303300022|gb|ADM09621.1| putative flagellar hook protein [Parvularcula bermudensis HTCC2503]
          Length = 446

 Score = 66.0 bits (159), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 37/168 (22%), Positives = 63/168 (37%), Gaps = 10/168 (5%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
           +S N G+A       +L+ +ADN+SN++T+G++    +F  +V     +       V + 
Sbjct: 5   SSLNAGVAGLATNAVKLAAIADNISNSETIGYKRAVAEFQSLVIDSGPNAYSAG-GVRAT 63

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALES---------PRGIILTRDGRFKVTDDGS 113
                 + GS I TG   D A+ G     + +          R ++LT  G F   +DG 
Sbjct: 64  PYIDVDDQGSLIGTGNATDLAIAGRGLLPVTNQDGAQAVTAERQLLLTATGSFTPDEDGY 123

Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLY 161
           L + SG + +   A     I           +          AT    
Sbjct: 124 LRTTSGLFLLGFPADSNGDIGTVSRQSTESLEPVRVNVSNFTATPTEN 171



 Score = 59.9 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 14/123 (11%), Positives = 37/123 (30%), Gaps = 5/123 (4%)

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                D A +   +  + +     +    +   + +  + +  V    G      S    
Sbjct: 319 YSLTKDGAEIGNLLDFEVDGQGNLDAVFDTGFRRTLYKIPVADVPNLNGLEAANASAYKV 378

Query: 180 NIPP-----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
           +            D     +    L +S  +   E+ Q+I   + ++S   +I   ++ +
Sbjct: 379 SQSSGDLYLWDAGDGPTGEMAGFSLMESTVDVANELTQLIQTQRAYSSNAKIIQTVDEIL 438

Query: 235 LEA 237
            E 
Sbjct: 439 QET 441


>gi|291059787|gb|ADD72522.1| flagellar basal-body rod protein FlgC [Treponema pallidum subsp.
           pallidum str. Chicago]
          Length = 152

 Score = 66.0 bits (159), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 30/67 (44%)

Query: 172 RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
            +++  S  +      D      K G++E  N + + EM  +I  ++ + +  ++I  ++
Sbjct: 82  EKDNAPSRLVYDPTHPDAILSGPKAGYVEYPNVDIVTEMVDLISASRAYEANISVISGSK 141

Query: 232 KSMLEAI 238
           +    A+
Sbjct: 142 EMFQRAL 148



 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 18/44 (40%), Gaps = 6/44 (13%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVK 40
          +  NI      A   R   ++DN++N  +     G  FR  +V 
Sbjct: 6  SGINIAATGMSAQRLRADVISDNIANASSTRTQEGGVFRRSRVV 49


>gi|213421609|ref|ZP_03354675.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 147

 Score = 66.0 bits (159), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 15/142 (10%), Positives = 44/142 (30%), Gaps = 5/142 (3%)

Query: 98  IILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157
              T    F  +   +  + +      +       +  +            +++ +V+  
Sbjct: 6   TAATFSLSFLNSMQQNTGANNIVATNQNGYKPGDLVSYQINNDGTVVGNYSNEQEQVLGQ 65

Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQ 212
           + L +   ++G   + ++  +                +   +  G LE SN +   E+  
Sbjct: 66  IVLANFANNEGLASQGDNVWAATQASGVALLGTAGSGNFGKLTNGALEASNVDLSKELVN 125

Query: 213 MIHLTQKFNSITTLIDENEKSM 234
           MI   + + S    I   ++ +
Sbjct: 126 MIVAQRNYQSNAQTIKTQDQIL 147


>gi|262364765|gb|ACY61322.1| flagellar hook protein [Yersinia pestis D182038]
          Length = 104

 Score = 65.7 bits (158), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 33/85 (38%), Gaps = 5/85 (5%)

Query: 162 SVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHL 216
           +     G V +  +  S +         +  T     ++ G LE+SN +   E+  ++  
Sbjct: 20  NFASPSGLVTQNGTSWSESNKSGAALLGTPGTGLLGSLESGALENSNVDITAELVGLMTA 79

Query: 217 TQKFNSITTLIDENEKSMLEAIRNI 241
            + + + T +I  N+  M    + +
Sbjct: 80  QRNYQASTKIISTNDSMMNALFQVL 104


>gi|260772274|ref|ZP_05881190.1| flagellar hook protein FlgE [Vibrio metschnikovii CIP 69.14]
 gi|260611413|gb|EEX36616.1| flagellar hook protein FlgE [Vibrio metschnikovii CIP 69.14]
          Length = 356

 Score = 65.3 bits (157), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 15/122 (12%), Positives = 38/122 (31%), Gaps = 5/122 (4%)

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
             D A+         + +        + +   +  + +  V   QG  ++  +       
Sbjct: 233 DQDGATTGFLTKIDFDEYGSVLATYSNGQNVTLGRVAMVRVANEQGLDKKGGTQWDSTQQ 292

Query: 183 -----PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
                       S  T+  G LE SN +   E+  +I   + F + +  ++ +       
Sbjct: 293 SGVKIWGESSKGSFGTISNGVLEQSNIDMTQELVDLISAQRNFQANSRALEVHTGLQQTI 352

Query: 238 IR 239
           ++
Sbjct: 353 LQ 354


>gi|255030384|ref|ZP_05302335.1| flagellar hook protein FlgE [Listeria monocytogenes LO28]
          Length = 189

 Score = 65.3 bits (157), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 17/125 (13%), Positives = 31/125 (24%), Gaps = 5/125 (4%)

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
           P  D                             +A + + +     G V+  N    P +
Sbjct: 64  PTSDGKGAATVKDYAVTDSGYIAVSYSDGTVIPVAQLAVATFSNEDGLVKMGNGEYVPGL 123

Query: 182 PPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                            +    LE SN +   E   ++     F   T +I   +  M +
Sbjct: 124 SSGDAVYGVAGQNGAGGISGSSLEGSNVDLSREFVNLMTYQSGFQGNTKVIRVADDVMKQ 183

Query: 237 AIRNI 241
            +  I
Sbjct: 184 IVNLI 188


>gi|306820111|ref|ZP_07453759.1| flagellar basal-body rod protein FlgC [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304551889|gb|EFM39832.1| flagellar basal-body rod protein FlgC [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 145

 Score = 65.3 bits (157), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 30/71 (42%), Gaps = 6/71 (8%)

Query: 168 GFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
           G V  ++       P  P  D +      G+++  N   + EM  MI   + + +  T +
Sbjct: 77  GIVEDKSDFKLRYDPGHPDADEN------GYVKMPNVELITEMVDMITAQRAYEANATAV 130

Query: 228 DENEKSMLEAI 238
           + ++  + +AI
Sbjct: 131 NTSKAMLQKAI 141



 Score = 45.2 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 19/47 (40%), Gaps = 6/47 (12%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43
          +  NI   A  A   R+  ++ N++N  T     G  ++     F E
Sbjct: 5  SGMNINATALTAERLRMDIISKNIANAQTTRTKNGLPYKRQVAVFKE 51


>gi|237799210|ref|ZP_04587671.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331022065|gb|EGI02122.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 122

 Score = 64.9 bits (156), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 34/72 (47%)

Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           + +   G+       P +  + V V+ GFL+ SN N++ EM  ++ L+++F     ++  
Sbjct: 48  MEKGPDGLIHTKTGRPADADATVQVESGFLQASNVNAVEEMTSVLALSRQFELHVKMMKT 107

Query: 230 NEKSMLEAIRNI 241
            E+      R +
Sbjct: 108 AEEDDQSMARVL 119


>gi|315301940|ref|ZP_07872942.1| flagellar basal-body rod protein FlgG [Listeria ivanovii FSL
          F6-596]
 gi|313629693|gb|EFR97824.1| flagellar basal-body rod protein FlgG [Listeria ivanovii FSL
          F6-596]
          Length = 74

 Score = 64.9 bits (156), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 11/66 (16%), Positives = 28/66 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M  +    ++   A +Q LS  ++N++N +T G++   V F++++            +  
Sbjct: 1  MNQTMYTAISGMNAFQQALSVTSNNIANANTTGYKKQSVVFNDLLYQNTMGSVAGGLYAG 60

Query: 61 SGKEYL 66
          +     
Sbjct: 61 TNPMSF 66


>gi|119953092|ref|YP_945301.1| flagellar basal body rod protein FlgC [Borrelia turicatae 91E135]
 gi|119861863|gb|AAX17631.1| flagellar basal-body rod protein FlgC [Borrelia turicatae 91E135]
          Length = 152

 Score = 64.9 bits (156), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 28/47 (59%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           ++G++E  N N++ EM  MI  ++ + + +T+I+ ++     A+  +
Sbjct: 104 RKGYVEFPNVNAVEEMVDMISASRAYEANSTVINSSKAIFRSALSIL 150



 Score = 59.9 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 6/46 (13%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFS 42
          +S N       A   RL  +A+N++N +T        +R  ++ FS
Sbjct: 5  SSINTAATGLTAQRLRLDVIANNIANVETTRTSEGGSYRRQRIVFS 50


>gi|330889084|gb|EGH21745.1| flagellar hook protein FlgE [Pseudomonas syringae pv. mori str.
           301020]
          Length = 419

 Score = 64.9 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 33/99 (33%), Gaps = 5/99 (5%)

Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLE 200
           G  +   K I  + L S    QG   R ++  + +      +       +  ++    LE
Sbjct: 319 GFTNGMNKNIGQVILASFANPQGLQARSDTRWTESADSGVADYDVPGVGTLGSLIGDGLE 378

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +N     E+  +I     + + +  I      M   I+
Sbjct: 379 GANVVLADELIALIQAQTAYQANSKAISTEATVMQTLIQ 417


>gi|296133051|ref|YP_003640298.1| flagellar basal-body rod protein FlgC [Thermincola sp. JR]
 gi|296031629|gb|ADG82397.1| flagellar basal-body rod protein FlgC [Thermincola potens JR]
          Length = 145

 Score = 64.9 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 21/43 (48%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
            +G++E  N N + EM  MI  T+ + +    I   ++   +A
Sbjct: 98  AQGYVEMPNVNIVTEMVDMISATRAYEANVASIRATKEMFAKA 140



 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 22/49 (44%), Gaps = 6/49 (12%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43
          M  SF+I  +   A   R+  +++N++N +T     G  +R     F  
Sbjct: 3  MFDSFDISASGLTAQRLRMDLISENIANVNTTRTASGGPYRRKLAVFEA 51


>gi|320535379|ref|ZP_08035493.1| flagellar basal-body rod protein FlgC [Treponema phagedenis F0421]
 gi|320147781|gb|EFW39283.1| flagellar basal-body rod protein FlgC [Treponema phagedenis F0421]
          Length = 152

 Score = 64.9 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 30/71 (42%), Gaps = 1/71 (1%)

Query: 172 RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
            +++  S  +      D        G++E  N N + EM  +I  ++ + +  ++I  ++
Sbjct: 82  EKDNAPSRLVYDPNHPDAIKSGPNAGYVEYPNVNIVTEMVDLISASRAYEANASVILGSK 141

Query: 232 KSMLEAIRNIA 242
           +    A+  I 
Sbjct: 142 EMFQRAL-EIG 151



 Score = 53.7 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 7/50 (14%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G---FRTIKVKFSE 43
          M +S NI      A   R   ++DN++N  +     G   F+  +V  SE
Sbjct: 3  MFSSINIAATGMSAERLRTDVISDNIANASSTRTQEGEGPFKRSRVILSE 52


>gi|237817504|ref|ZP_04596494.1| flagellar hook protein FlgE [Brucella abortus str. 2308 A]
 gi|237787259|gb|EEP61477.1| flagellar hook protein FlgE [Brucella abortus str. 2308 A]
          Length = 106

 Score = 64.5 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 3/64 (4%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M      G++   A   RLSTVADN++N  TVG++  + +FS +V           S + 
Sbjct: 6  MMR---TGVSGMNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAGQYNSGSVLT 62

Query: 61 SGKE 64
            + 
Sbjct: 63 DVRY 66


>gi|289804815|ref|ZP_06535444.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
           enterica serovar Typhi str. AG3]
          Length = 134

 Score = 64.5 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 21/132 (15%), Positives = 39/132 (29%), Gaps = 7/132 (5%)

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169
           + G +    G    +        +   D    V   G +    K++   G        G 
Sbjct: 6   EGGPITVPEGSEITIAADGTISALNPGDPPNTVAPVGRL----KLVKAEGNEVQRSDDGL 61

Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
            R      +       L     + +  G LE SN   +  M  MI   ++F     +I  
Sbjct: 62  FRLTAEAQAE--RGAVLAADPSIRIMSGVLEGSNVKPVEAMTDMIANARRFEMQMKVITS 119

Query: 230 NEKSMLEAIRNI 241
            +++   A   +
Sbjct: 120 VDENEGRA-NQL 130


>gi|256043052|ref|ZP_05445997.1| flagellar basal body rod protein FlgF [Brucella melitensis bv. 1
           str. Rev.1]
          Length = 70

 Score = 64.1 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 21/67 (31%), Positives = 41/67 (61%)

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           + P+ P  P+ D + V V +G +E SN ++M EM ++I +++ F  +  L+ + E ++ E
Sbjct: 1   MIPSKPAQPVVDDNSVGVVQGMIEGSNVDAMTEMTRLISISRAFEQVNNLLSQQEATVSE 60

Query: 237 AIRNIAS 243
           AI+ + S
Sbjct: 61  AIKTLGS 67


>gi|226225740|ref|YP_002759846.1| flagellar basal-body rod protein FlgC [Gemmatimonas aurantiaca
           T-27]
 gi|226088931|dbj|BAH37376.1| flagellar basal-body rod protein FlgC [Gemmatimonas aurantiaca
           T-27]
          Length = 183

 Score = 64.1 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/238 (12%), Positives = 61/238 (25%), Gaps = 60/238 (25%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  S  I  +   A  QR+ T+A N++N D                              
Sbjct: 4   MFKSMGIAASGISAQRQRMETIAQNIANADVT---------------------------- 35

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
                   +   +      L+ A   +A F                            G 
Sbjct: 36  -----RGTDGTPYKRREVVLESATAQNALF------------------NPGNVTAQTLGN 72

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
             V    +  + I    + F V           V+       V    G    +  G    
Sbjct: 73  QNVAGAPAFEVPITDAAQTFQVPVLPVTGGADGVMGGEFGVRV---AGVAEDQGEGRLVY 129

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            P  P  D +      G++   + ++  E+ +++   + + +   +    +  +  A+
Sbjct: 130 EPGHPDADGN------GYVRYPDIDTTQELVKLMDAKRIYEANAAVFQTAKSMLRAAL 181


>gi|126653431|ref|ZP_01725527.1| flagellar hook-basal body protein [Bacillus sp. B14905]
 gi|126589787|gb|EAZ83920.1| flagellar hook-basal body protein [Bacillus sp. B14905]
          Length = 125

 Score = 64.1 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 51/125 (40%), Gaps = 18/125 (14%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--------- 51
           M  +          L+ +L T+++N++N++T GF+  +  F+E++    N+         
Sbjct: 1   MLRTMITATNTMGQLQNKLDTISNNIANSNTTGFKAKEASFNELLYQQFNNDKLDRAERQ 60

Query: 52  ---IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA------LESPRGIILTR 102
                +  S    G+   +++ GS  +T  +LD A      +        E+    + TR
Sbjct: 61  TPVGIRYGSGAMLGQIKSNQKQGSLQTTNRDLDLAFTTAKQYFNILMPNGENGTETVYTR 120

Query: 103 DGRFK 107
            G F 
Sbjct: 121 QGDFY 125


>gi|224418355|ref|ZP_03656361.1| flagellar hook protein FlgE [Helicobacter canadensis MIT 98-5491]
          Length = 727

 Score = 64.1 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 32/105 (30%), Gaps = 18/105 (17%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL------------------SGVTV 194
           + I  +G+ +    QG  +   +    N      E                        V
Sbjct: 619 EPIGRIGIAAFVNDQGLSKVGGNLFKMNAMTINGETSVVSGPPLLAWEETGNASLKYGQV 678

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
               LE SN ++   +  +I   + +      I   ++ M EAI+
Sbjct: 679 LDHMLETSNVDTGTALTDLIVYQRGYQMSAKSITTADQLMQEAIQ 723


>gi|332297607|ref|YP_004439529.1| flagellar basal-body rod protein FlgC [Treponema brennaborense DSM
           12168]
 gi|332180710|gb|AEE16398.1| flagellar basal-body rod protein FlgC [Treponema brennaborense DSM
           12168]
          Length = 151

 Score = 64.1 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 30/69 (43%), Gaps = 2/69 (2%)

Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           V+    G     P  P    SG     G++E  N N + EM  +I  ++ + + +++I  
Sbjct: 81  VKDTAQGRMVYDPSHPDAIQSGPN--AGYVEYPNVNIVNEMVDLISASRAYEANSSVIQG 138

Query: 230 NEKSMLEAI 238
           ++     A+
Sbjct: 139 SKDMFSSAL 147



 Score = 45.6 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 8/29 (27%), Positives = 12/29 (41%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTV 32
          S NI          R   ++DN++N  T 
Sbjct: 6  SINIAATGMSVERLRTDVISDNIANASTT 34


>gi|257457889|ref|ZP_05623048.1| flagellar basal-body rod protein FlgC [Treponema vincentii ATCC
           35580]
 gi|257444602|gb|EEV19686.1| flagellar basal-body rod protein FlgC [Treponema vincentii ATCC
           35580]
          Length = 151

 Score = 64.1 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 31/75 (41%), Gaps = 3/75 (4%)

Query: 168 GFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
           G  +  +       P  P   +SG     G++E  N N + EM  +I  ++ + +   ++
Sbjct: 79  GIEKDNSEPRLSYEPDHPHAIVSGPK--AGYVEYPNVNIVTEMVDLISASRSYEANAAVV 136

Query: 228 DENEKSMLEAIRNIA 242
             +++    A+  I 
Sbjct: 137 QGSKEMFQRAL-EIG 150



 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 10/69 (14%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56
          +S NI      A   R   ++DN++N  T        FR  +V    ++    + ID ++
Sbjct: 5  SSINIAATGMSAERLRTDVISDNIANASTTSSQEGGYFRRSRV----ILAQKNDGIDWRL 60

Query: 57 SFVASGKEY 65
           FV S  + 
Sbjct: 61 PFVPSDMDR 69


>gi|531462|gb|AAA67880.1| orfG [Bacillus subtilis subsp. subtilis str. 168]
          Length = 135

 Score = 64.1 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 16/126 (12%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  S          L+Q++ T++ N+SN++T G++     FSE+V    + +D+K   VA
Sbjct: 1   MLRSMLTASTTLNQLQQQIDTISSNLSNSNTTGYKAKDTNFSELVRQQFDQVDEKNEEVA 60

Query: 61  SGKEYLS---------------KEVGSFISTGTELDFALEGDA-WFALESPRGIILTRDG 104
             ++                   + GS   T  +LD A      +  +        TRDG
Sbjct: 61  KARKTPPGLRLGVGAMMSSRLVSDQGSIQKTDRDLDIAFTSPYQYLQVNVNGNRQYTRDG 120

Query: 105 RFKVTD 110
              VT 
Sbjct: 121 ALYVTP 126


>gi|158604896|gb|ABW74721.1| flagellar hook protein [Campylobacter concisus 13826]
          Length = 533

 Score = 63.7 bits (153), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 15/106 (14%), Positives = 36/106 (33%), Gaps = 8/106 (7%)

Query: 142 VGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP--------PTPLEDLSGVT 193
                  + +   +A + LY     QG  +  ++                   E + G  
Sbjct: 425 NIMANFDNTRAFPVAKVALYHFINDQGVAKVGDNLYEATANSGEPFFYKNKAGETVYGAQ 484

Query: 194 VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +    LE SN +    + ++I   + + +    I  +++ +  AI+
Sbjct: 485 ILANKLEMSNVDLGQALSEVIVTQKAYEASAKSITTSDEMIQTAIQ 530



 Score = 58.7 bits (140), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 49/132 (37%), Gaps = 7/132 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------KNDIDQ 54
           M   F  G++        +   ++N+SN + VGF+    +F  ++             DQ
Sbjct: 1   MMRGFYNGVSGIKTQSFGMDVWSNNISNINNVGFKASIPEFKNLINQNLVSAGSGPTSDQ 60

Query: 55  KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF-ALESPRGIILTRDGRFKVTDDGS 113
                      L    GSF ST    D A+ GD +F  ++       TR G F +   G+
Sbjct: 61  VGLGATKQTTALDMSNGSFQSTDNNFDLAIGGDGFFGVVDKTGKNYYTRTGTFDIDAAGN 120

Query: 114 LVSASGKYPVLD 125
           LV   G   +  
Sbjct: 121 LVDTRGNLLLGT 132


>gi|257484945|ref|ZP_05638986.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 126

 Score = 63.7 bits (153), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 34/72 (47%)

Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           + +   G+       P +  + V V+ GFL+ SN N++ EM  ++ L+++F     ++  
Sbjct: 52  MEKGPDGLIHTKTGRPADADATVQVESGFLQASNVNAVEEMTSVLALSRQFELHVKMMKT 111

Query: 230 NEKSMLEAIRNI 241
            E+      R +
Sbjct: 112 AEEDDQSMARVL 123


>gi|328947992|ref|YP_004365329.1| flagellar basal-body rod protein FlgC [Treponema succinifaciens DSM
           2489]
 gi|328448316|gb|AEB14032.1| flagellar basal-body rod protein FlgC [Treponema succinifaciens DSM
           2489]
          Length = 153

 Score = 63.7 bits (153), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 3/74 (4%)

Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           ++    G     P  P    SG    +G++E  N N + EM  MI   + + + +++I  
Sbjct: 82  IKDSEQGRMVYDPSHPDAIQSGPN--KGYVEYPNVNIVNEMVNMISANRAYEANSSVIQG 139

Query: 230 NEKSMLEAIRNIAS 243
           +++    A+  IAS
Sbjct: 140 SKEMFASAL-EIAS 152



 Score = 45.6 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 7/29 (24%), Positives = 12/29 (41%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTV 32
          S NI          R   +++N++N  T 
Sbjct: 6  SINIAATGMSVERLRTDVISNNIANATTT 34


>gi|313141887|ref|ZP_07804080.1| flagellar hook protein FlgE [Helicobacter canadensis MIT 98-5491]
 gi|313130918|gb|EFR48535.1| flagellar hook protein FlgE [Helicobacter canadensis MIT 98-5491]
          Length = 708

 Score = 63.7 bits (153), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 32/105 (30%), Gaps = 18/105 (17%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL------------------SGVTV 194
           + I  +G+ +    QG  +   +    N      E                        V
Sbjct: 600 EPIGRIGIAAFVNDQGLSKVGGNLFKMNAMTINGETSVVSGPPLLAWEETGNASLKYGQV 659

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
               LE SN ++   +  +I   + +      I   ++ M EAI+
Sbjct: 660 LDHMLETSNVDTGTALTDLIVYQRGYQMSAKSITTADQLMQEAIQ 704


>gi|256370963|ref|YP_003108787.1| protein of unknown function DUF1078 domain protein [Acidimicrobium
           ferrooxidans DSM 10331]
 gi|256007547|gb|ACU53114.1| protein of unknown function DUF1078 domain protein [Acidimicrobium
           ferrooxidans DSM 10331]
          Length = 431

 Score = 63.7 bits (153), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/149 (20%), Positives = 65/149 (43%), Gaps = 13/149 (8%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS--- 57
           M  S +  ++   A ++ L  +A+N++N +T G+++ + +F++++   ++     +    
Sbjct: 1   MTKSLSSAISGIEANQEWLDNIANNIANANTTGYQSTQTEFADLLYQQQSAAGGPVPGQT 60

Query: 58  ----------FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107
                      V           G+ + TGT  D A++G  +  +        TRDG  +
Sbjct: 61  GGTNPLVVGSGVRVSATPTDFSQGTIVQTGTSTDVAIQGQGFLVVNQGGQNYYTRDGALQ 120

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQK 136
           +   G LV+ASG   +  + +   Q+ Q 
Sbjct: 121 LDGAGQLVTASGALVMGWVPNAAGQVNQN 149



 Score = 63.3 bits (152), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/193 (12%), Positives = 57/193 (29%), Gaps = 11/193 (5%)

Query: 52  IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDD 111
            D     +++     +         G    + L       L+ P         +F  +  
Sbjct: 243 FDPATGQISAISGTSTANPDQLALGGFPTSYDLPAGYAMNLDFPTPGTAQAVTQFAASSP 302

Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171
            + V+    YP   +A   I      E      +       +V+  + L     +QG  +
Sbjct: 303 TAQVTNQNGYPSGALAGFTIGSDGVIEGTYANGR------TQVLGQIALAQFANAQGLSK 356

Query: 172 RENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
           + N   +        +  S        +  G LE SN +   E+  ++     + + T +
Sbjct: 357 QGNLLYAATTNSGAPQLGSPGAAGLGQLVGGALESSNVSIGSELTNLVVAQTDYQANTKV 416

Query: 227 IDENEKSMLEAIR 239
           +      +   ++
Sbjct: 417 VQTTATVLQSLVQ 429


>gi|83593766|ref|YP_427518.1| hypothetical protein Rru_A2431 [Rhodospirillum rubrum ATCC 11170]
 gi|83576680|gb|ABC23231.1| Protein of unknown function DUF1078 [Rhodospirillum rubrum ATCC
           11170]
          Length = 442

 Score = 63.0 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 57/200 (28%), Gaps = 9/200 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +F     A +     L  ++ N++N +T G++ +   F  ++     + D     V    
Sbjct: 6   AFTNSSMAMITQSHALGQISTNVANINTTGYKQVDTNFKTLLSESTANFD--FFGVKPVD 63

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRG----IILTRDGRFKVTDDGSLVS--A 117
                E G  ++TG  LD A+ G   F +            TRDG F        V    
Sbjct: 64  YRRVSEQGGLLTTGRNLDVAIGGQGLFMVNQQADLSGETFYTRDGSFGARVAKETVGKVV 123

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF-VRRENSG 176
           +G   +       +     D+                  T+             R E  G
Sbjct: 124 AGNSYLSTQDGYYVMGWAADQAAVQAGTEPFPVNDTKTGTITGARALSPIQLNTRAEADG 183

Query: 177 ISPNIPPTPLEDLSGVTVKR 196
            +           +  T  +
Sbjct: 184 QATTAAVVRANINALATTTQ 203



 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 24/70 (34%)

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
           +   R  ++     I         G TV  G LE S  +   +  +MI     ++S  T+
Sbjct: 367 KNLYRASDAAGESRIFSADSAASVGTTVTSGALEQSTVDLGDQFSKMITTQTAYSSSATV 426

Query: 227 IDENEKSMLE 236
               ++    
Sbjct: 427 FRTCDEMSQT 436


>gi|326402284|ref|YP_004282365.1| flagellar hook protein FlgE [Acidiphilium multivorum AIU301]
 gi|325049145|dbj|BAJ79483.1| flagellar hook protein FlgE [Acidiphilium multivorum AIU301]
          Length = 425

 Score = 63.0 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 54/143 (37%), Gaps = 16/143 (11%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           + +  ++   A     + ++DN++N+ T+G++ +   F+  +       +     V +  
Sbjct: 6   ALDTSVSGLQAQSSAFTNISDNIANSQTIGYKGVNTHFTNYLVQST-ASNNGPDSVVANP 64

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESP---------------RGIILTRDGRFKV 108
           EY +   G+   +   L  A+ G+ +F +  P                    TR G F +
Sbjct: 65  EYTNTVEGTITQSSNPLSLAINGNGYFNVSLPGPTTTTAGKTTQTFDAQQYYTRAGDFTL 124

Query: 109 TDDGSLVSASGKYPVLDMASVPI 131
              G LV+ +G Y      +   
Sbjct: 125 NSSGYLVNGAGAYLDGWSVNPTT 147



 Score = 59.9 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 16/132 (12%), Positives = 41/132 (31%), Gaps = 6/132 (4%)

Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171
           G+ ++  G       +     +    +          +   K IA + L S         
Sbjct: 293 GTSLNLQGVSQNGSPSGAFSNLSIDTQGNITANY--TNGFSKQIAQIPLASFASPDALQN 350

Query: 172 RENS----GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
           +         +           SG  +  G +E+SN +   +   +I+  Q + + T ++
Sbjct: 351 KSGQIETATQASGAATINAVGGSGGALVTGSVENSNVDIATQFTDLINAQQAYTANTKVV 410

Query: 228 DENEKSMLEAIR 239
              ++ +   + 
Sbjct: 411 TAAQQILTTTVN 422


>gi|148259130|ref|YP_001233257.1| flagellar hook protein FlgE [Acidiphilium cryptum JF-5]
 gi|146400811|gb|ABQ29338.1| flagellar basal body FlaE domain protein [Acidiphilium cryptum
           JF-5]
          Length = 425

 Score = 63.0 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 54/143 (37%), Gaps = 16/143 (11%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           + +  ++   A     + ++DN++N+ T+G++ +   F+  +       +     V +  
Sbjct: 6   ALDTSVSGLQAQSSAFTNISDNIANSQTIGYKGVNTHFTNYLVQST-ASNNGPDSVVANP 64

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESP---------------RGIILTRDGRFKV 108
           EY +   G+   +   L  A+ G+ +F +  P                    TR G F +
Sbjct: 65  EYTNTVEGTITQSSNPLSLAINGNGYFNVSLPGPTTTTAGKTTQTFDAQQYYTRAGDFTL 124

Query: 109 TDDGSLVSASGKYPVLDMASVPI 131
              G LV+ +G Y      +   
Sbjct: 125 NSSGYLVNGAGAYLDGWSVNPTT 147



 Score = 59.9 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 16/132 (12%), Positives = 41/132 (31%), Gaps = 6/132 (4%)

Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171
           G+ ++  G       +     +    +          +   K IA + L S         
Sbjct: 293 GTSLNLQGVSQNGSPSGAFSNLSIDTQGNITANY--TNGFSKQIAQIPLASFASPDALQN 350

Query: 172 RENS----GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
           +         +           SG  +  G +E+SN +   +   +I+  Q + + T ++
Sbjct: 351 KSGQIETATQASGAATINAVGGSGGALVTGSVENSNVDIATQFTDLINAQQAYTANTKVV 410

Query: 228 DENEKSMLEAIR 239
              ++ +   + 
Sbjct: 411 TAAQQILTTTVN 422


>gi|310659047|ref|YP_003936768.1| flagellar component of cell-proximal portion of basal-body rod
           [Clostridium sticklandii DSM 519]
 gi|308825825|emb|CBH21863.1| flagellar component of cell-proximal portion of basal-body rod
           [Clostridium sticklandii]
          Length = 146

 Score = 63.0 bits (151), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 27/46 (58%), Gaps = 1/46 (2%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G++  SN +++ EM  MI  T+ + +  T ++ ++  +L+A+  I 
Sbjct: 101 GYVTMSNVDTITEMVDMISATRSYEANVTALNTSKSMLLKAL-EIG 145



 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 6/47 (12%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43
          +S NI  +A  A   R+  ++ N++N +T     G  +R   V F E
Sbjct: 5  SSINISASALTAERTRMDVISKNLANANTTRTQSGDPYRRQVVVFKE 51


>gi|170022971|ref|YP_001719476.1| flagellar basal body rod protein [Yersinia pseudotuberculosis
          YPIII]
 gi|169749505|gb|ACA67023.1| flagellar basal body rod protein [Yersinia pseudotuberculosis
          YPIII]
          Length = 102

 Score = 62.6 bits (150), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 5/87 (5%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
          SF+I   A  A  ++L+T+++N++N+ T GF+  + +FS +         Q +    SG 
Sbjct: 2  SFSIANTALNAHTEQLNTISNNIANSATKGFKASRTEFSSMYAQ-----SQPLGVAVSGV 56

Query: 64 EYLSKEVGSFISTGTELDFALEGDAWF 90
               + G    TG  LD A+ G  +F
Sbjct: 57 SQNISKDGQKEKTGMGLDLAISGGGFF 83


>gi|42526722|ref|NP_971820.1| flagellar basal body rod protein FlgC [Treponema denticola ATCC
           35405]
 gi|41817037|gb|AAS11731.1| flagellar basal-body rod protein FlgC [Treponema denticola ATCC
           35405]
          Length = 151

 Score = 62.6 bits (150), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 21/42 (50%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++E  N N + EM  +I  ++ + +   +++  +     A+
Sbjct: 106 GYVEYPNVNIVTEMVDLISASRAYEANLAVVNGAKDMFQRAL 147



 Score = 46.0 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 28/68 (41%), Gaps = 10/68 (14%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDIDQKIS 57
          S NI          R   +++N++N  ++    G  F+  +V    +VG  K+ ID +  
Sbjct: 6  SINIAATGMGVERLRTDVISNNIANASSLETQEGGPFKRSRV----IVGQKKSGIDWQTP 61

Query: 58 FVASGKEY 65
          F     E 
Sbjct: 62 FTPQNVER 69


>gi|325473784|gb|EGC76972.1| FlgC protein [Treponema denticola F0402]
          Length = 151

 Score = 62.6 bits (150), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 21/42 (50%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++E  N N + EM  +I  ++ + +   +++  +     A+
Sbjct: 106 GYVEYPNVNIVTEMVDLISASRAYEANLAVVNGAKDMFQRAL 147



 Score = 45.6 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 27/65 (41%), Gaps = 10/65 (15%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDIDQKIS 57
          S NI          R   +++N++N  ++    G  F+  +V    +VG  K+ ID +  
Sbjct: 6  SINIAATGMGVERLRTDVISNNIANASSLETQEGGPFKRSRV----IVGQKKSGIDWQTP 61

Query: 58 FVASG 62
          F    
Sbjct: 62 FTPQN 66


>gi|330955627|gb|EGH55887.1| flagellar hook protein FlgE [Pseudomonas syringae Cit 7]
          Length = 208

 Score = 62.6 bits (150), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 30/98 (30%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLED 201
             + K +VI    L S    QG  +   +                +  +   +    LE+
Sbjct: 109 YTNGKSQVIGQTSLTSFANVQGLAQAGGTNWRETFASGVPVSGAPQSGTLGYITGQALEE 168

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E+  +I     + +    I      M   I+
Sbjct: 169 SNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQTTIQ 206


>gi|159045788|ref|YP_001534582.1| flagellar basal body rod protein FlgC [Dinoroseobacter shibae DFL
          12]
 gi|157913548|gb|ABV94981.1| flagellar basal-body rod protein FlgC [Dinoroseobacter shibae DFL
          12]
          Length = 130

 Score = 62.6 bits (150), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 30/79 (37%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
            S  +  +  +A  QRL+ V+ N++N DT G++  + +F ++           +  V+ 
Sbjct: 5  LKSMTVSASGLMAQAQRLNVVSQNIANVDTPGYQRKQAEFQQMFDTFDGTDGVAVLRVSL 64

Query: 62 GKEYLSKEVGSFISTGTEL 80
              L +            
Sbjct: 65 DDSALKRIYDPSHPLADPT 83



 Score = 41.0 bits (94), Expect = 0.15,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 38/131 (29%), Gaps = 3/131 (2%)

Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170
            G L+ +        MA           I NV   G   ++ +       +        +
Sbjct: 1   MGDLLKSMTVSASGLMAQAQRLNVVSQNIANVDTPGYQRKQAEFQQMFDTFDGTDGVAVL 60

Query: 171 RRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
           R      +      P   L+  T   G+ E SN ++M E+       + + +     D  
Sbjct: 61  RVSLDDSALKRIYDPSHPLADPT---GYYEGSNVSTMVEVADAREAQRSYEANLRSFDNA 117

Query: 231 EKSMLEAIRNI 241
            +     +  +
Sbjct: 118 RQMSRSLLELL 128


>gi|294827625|ref|NP_710527.2| flagellar basal body rod protein FlgC [Leptospira interrogans
           serovar Lai str. 56601]
 gi|293385469|gb|AAN47545.2| flagellar basal body rod protein FlgC [Leptospira interrogans
           serovar Lai str. 56601]
          Length = 153

 Score = 62.2 bits (149), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 23/42 (54%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++E  N N + EM  MI  ++ + +   +I+ ++    +A+
Sbjct: 107 GYVEMPNVNIVTEMTDMISASRSYEANVQMINGSKAMFNKAL 148



 Score = 54.9 bits (130), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 27/65 (41%), Gaps = 7/65 (10%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNT----DTVG---FRTIKVKFSEVVGAIKNDIDQK 55
          +S NI      A   R+  +++N++N+    +T G   FR  +V  + +    K      
Sbjct: 5  SSINISATGLSAQRLRMDVISNNIANSTTTRNTNGDGPFRRDRVVMTPINLRTKWRSPVY 64

Query: 56 ISFVA 60
             V+
Sbjct: 65 PFGVS 69


>gi|116327145|ref|YP_796865.1| flagellar basal body rod protein FlgC [Leptospira borgpetersenii
           serovar Hardjo-bovis L550]
 gi|116332198|ref|YP_801916.1| flagellar basal body rod protein FlgC [Leptospira borgpetersenii
           serovar Hardjo-bovis JB197]
 gi|116119889|gb|ABJ77932.1| Endoflagellar proximal basal body rod protein [Leptospira
           borgpetersenii serovar Hardjo-bovis L550]
 gi|116125887|gb|ABJ77158.1| Endoflagellar proximal basal body rod protein [Leptospira
           borgpetersenii serovar Hardjo-bovis JB197]
          Length = 153

 Score = 62.2 bits (149), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 23/42 (54%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++E  N N + EM  MI  ++ + +   +I+ ++    +A+
Sbjct: 107 GYVEMPNVNIVTEMTDMISASRSYEANVQMINGSKAMFNKAL 148



 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 27/65 (41%), Gaps = 7/65 (10%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNT----DTVG---FRTIKVKFSEVVGAIKNDIDQK 55
          +S NI      A   R+  +++N++N+    +T G   FR  +V  + +    +      
Sbjct: 5  SSINISATGLSAQRLRMDVISNNIANSTTTRNTNGDGPFRRDRVVMTPINLRTRWRSPVY 64

Query: 56 ISFVA 60
             VA
Sbjct: 65 PFGVA 69


>gi|45656202|ref|YP_000288.1| flagellar basal body rod protein FlgC [Leptospira interrogans
           serovar Copenhageni str. Fiocruz L1-130]
 gi|45599436|gb|AAS68925.1| flagellar basal-body rod protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 155

 Score = 62.2 bits (149), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 23/42 (54%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++E  N N + EM  MI  ++ + +   +I+ ++    +A+
Sbjct: 109 GYVEMPNVNIVTEMTDMISASRSYEANVQMINGSKAMFNKAL 150



 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 27/65 (41%), Gaps = 7/65 (10%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNT----DTVG---FRTIKVKFSEVVGAIKNDIDQK 55
          +S NI      A   R+  +++N++N+    +T G   FR  +V  + +    K      
Sbjct: 7  SSINISATGLSAQRLRMDVISNNIANSTTTRNTNGDGPFRRDRVVMTPINLRTKWRSPVY 66

Query: 56 ISFVA 60
             V+
Sbjct: 67 PFGVS 71


>gi|309788144|ref|ZP_07682750.1| flagellar basal-body rod protein flgF [Shigella dysenteriae 1617]
 gi|308923996|gb|EFP69497.1| flagellar basal-body rod protein flgF [Shigella dysenteriae 1617]
          Length = 111

 Score = 62.2 bits (149), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 36/113 (31%), Gaps = 2/113 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   ++       + V 
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGPSLPTRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113
           +         G    T   LD AL+ D W          +     F++   G+
Sbjct: 59  ASTPGADMTPGKMDYTSRPLDVALQQDGWPCRPLTAAKGIRVMAAFRLIPPGN 111


>gi|330809244|ref|YP_004353706.1| flagellar hook protein FlgE [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327377352|gb|AEA68702.1| putative flagellar hook protein FlgE [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
          Length = 392

 Score = 61.8 bits (148), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 10/87 (11%), Positives = 30/87 (34%), Gaps = 4/87 (4%)

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPL----EDLSGVTVKRGFLEDSNANSMYEMGQ 212
            + L         +   NS                +     ++ G+LE SN +   E G 
Sbjct: 301 QLALADFADESALIAGANSLYHTPSSMKAEFGRAGEKQFGRIQGGYLELSNVDLAQEFGD 360

Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIR 239
           ++ + + + + + ++  + + + +   
Sbjct: 361 ILIIQRGYQASSRVMTVSNEMLEQLYN 387



 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 52/126 (41%), Gaps = 6/126 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +F  G++   +  + L  V++N+SN +T G+R       +      N  D +     
Sbjct: 1   MLQAFFNGMSGLFSFAKGLDNVSNNVSNMNTPGYRGS-----DTFYRAVNGQDGQSFGSG 55

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119
                +  + G    TG   + A+ G  +F L   +  +  TR G+F+V  DG LV    
Sbjct: 56  IAGTQVRIKPGENRQTGNNTNVAINGAGYFVLRDEQGALSYTRAGQFEVDKDGYLVDTIS 115

Query: 120 KYPVLD 125
           +  +  
Sbjct: 116 QQRIAG 121


>gi|313673746|ref|YP_004051857.1| flagellar basal-body rod protein flgc [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312940502|gb|ADR19694.1| flagellar basal-body rod protein FlgC [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 134

 Score = 61.8 bits (148), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 24/42 (57%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G+++  N N + EM  MI  ++ + +  T+++  ++  + A+
Sbjct: 88  GYVQYPNVNPIEEMVNMIEASRSYEANVTVLNTAKQLAMRAL 129



 Score = 58.3 bits (139), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 29/103 (28%), Gaps = 6/103 (5%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDT----VG--FRTIKVKFSEVVGAIKNDIDQKI 56
              N+      A   R++ ++ N++N +T     G  ++   V F E++        +  
Sbjct: 5   NILNVAATGLSAQRIRINVISSNLANANTTKTETGEPYKRKDVVFKELLEGEYTGGVRVE 64

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
             V   K ++ K          E                    
Sbjct: 65  KVVEDKKPFVLKYEPGHPDANEEGYVQYPNVNPIEEMVNMIEA 107


>gi|307718596|ref|YP_003874128.1| hypothetical protein STHERM_c09080 [Spirochaeta thermophila DSM
           6192]
 gi|306532321|gb|ADN01855.1| hypothetical protein STHERM_c09080 [Spirochaeta thermophila DSM
           6192]
 gi|315186391|gb|EFU20151.1| flagellar basal-body rod protein FlgC [Spirochaeta thermophila DSM
           6578]
          Length = 152

 Score = 61.8 bits (148), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 25/46 (54%), Gaps = 1/46 (2%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G++E  N N + EM  +I  ++ + +   +++ ++   L+A+  I 
Sbjct: 107 GYVEYPNVNIVNEMVDLIDASRAYEANLAVVNGSKTMFLKAL-EIG 151



 Score = 61.0 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 19/44 (43%), Gaps = 6/44 (13%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFS 42
           NI      A   R+  +++N++N  T     G  FR  +V F 
Sbjct: 7  INIAATGLTAQRLRMDVISNNIANATTTRTTEGGPFRRSRVVFR 50


>gi|260886629|ref|ZP_05897892.1| flagellar basal-body rod protein FlgC [Selenomonas sputigena ATCC
           35185]
 gi|330839539|ref|YP_004414119.1| flagellar basal-body rod protein FlgC [Selenomonas sputigena ATCC
           35185]
 gi|260863772|gb|EEX78272.1| flagellar basal-body rod protein FlgC [Selenomonas sputigena ATCC
           35185]
 gi|329747303|gb|AEC00660.1| flagellar basal-body rod protein FlgC [Selenomonas sputigena ATCC
           35185]
          Length = 147

 Score = 61.8 bits (148), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++E  N N + EM  MI  ++ + +  T I+  +     A+ 
Sbjct: 102 GYVERPNINIVQEMVDMITASRAYEANVTAINAAKGMAQNALN 144



 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 6/32 (18%), Positives = 15/32 (46%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32
          M    +   +   A   R+  +++N++N +T 
Sbjct: 3  MFGGIDASASGLTAERLRMDVISNNIANANTT 34


>gi|313650471|gb|EFS14878.1| flagellar basal-body rod protein flgF [Shigella flexneri 2a str.
           2457T]
 gi|323165586|gb|EFZ51373.1| flagellar basal-body rod protein flgF [Shigella sonnei 53G]
 gi|332759653|gb|EGJ89958.1| flagellar basal-body rod protein flgF [Shigella flexneri 2747-71]
 gi|332761423|gb|EGJ91707.1| flagellar basal-body rod protein flgF [Shigella flexneri K-671]
 gi|333004887|gb|EGK24407.1| flagellar basal-body rod protein flgF [Shigella flexneri VA-6]
 gi|333005400|gb|EGK24918.1| flagellar basal-body rod protein flgF [Shigella flexneri K-218]
 gi|333019423|gb|EGK38706.1| flagellar basal-body rod protein flgF [Shigella flexneri K-304]
          Length = 132

 Score = 61.8 bits (148), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 26/67 (38%), Gaps = 1/67 (1%)

Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
           S  +       L+    + V  G LE SN N++  M  MI   ++F     +I   + + 
Sbjct: 63  SAETQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNA 122

Query: 235 LEAIRNI 241
             A   +
Sbjct: 123 GRA-NQL 128


>gi|2105146|gb|AAB57897.1| FlgC [Treponema denticola]
          Length = 151

 Score = 61.8 bits (148), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 21/42 (50%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++E  N N + EM  +I  ++ + +   +++  +     A+
Sbjct: 106 GYVEYPNVNIVTEMVDLISASRAYEANLAVVNGAKDMFQRAL 147



 Score = 45.2 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 43/121 (35%), Gaps = 13/121 (10%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDIDQKIS 57
           S NI          R   +++N++N  ++    G  F+  +V    +VG  K+ ID +  
Sbjct: 6   SINIAATGMGVERLRTDVISNNIANASSLETQEGGPFKRSRV----IVGQKKSGIDWQTP 61

Query: 58  FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSA 117
           F     E    E    +S   +     +   +     P+ +       +    + ++V+ 
Sbjct: 62  FTPQNVERGVGEGVKVLSIEKDTS---DTVGFMIRTHPKALKYGPKEGYVEYPNVNIVTE 118

Query: 118 S 118
            
Sbjct: 119 M 119


>gi|330899402|gb|EGH30821.1| flagellar hook protein FlgE [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 93

 Score = 61.4 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 15/91 (16%), Positives = 27/91 (29%), Gaps = 5/91 (5%)

Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLEDSNANSMY 208
           VI    L S    QG  +   +                +  +   +    LE+SN +   
Sbjct: 1   VIGQTSLTSFANVQGLAQAGGTNWRETFASGVPVSGAPQSGTLGYITGQALEESNVDLTM 60

Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           E+  +I     + +    I      M   I+
Sbjct: 61  ELVNLIKAQSNYQANAKTISTQSTIMQTTIQ 91


>gi|289679028|ref|ZP_06499918.1| flagellar hook protein FlgE [Pseudomonas syringae pv. syringae FF5]
          Length = 159

 Score = 61.4 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 30/98 (30%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLED 201
             + K +VI    L S    QG  +   +                +  +   +    LE+
Sbjct: 60  YTNGKSQVIGQTSLTSFANVQGLAQAGGTNWRETFASGVPVSGAPQSGTLGYITGQALEE 119

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E+  +I     + +    I      M   I+
Sbjct: 120 SNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQTTIQ 157


>gi|313895871|ref|ZP_07829425.1| flagellar basal-body rod protein FlgC [Selenomonas sp. oral taxon
           137 str. F0430]
 gi|312975296|gb|EFR40757.1| flagellar basal-body rod protein FlgC [Selenomonas sp. oral taxon
           137 str. F0430]
          Length = 151

 Score = 61.4 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           G++E  N N + EM  MI  ++ + +  T I+  +  +  A+R I S
Sbjct: 104 GYVERPNVNIVSEMVDMISASRGYEANATTINAAKSMVNAALR-IGS 149



 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 18/48 (37%), Gaps = 6/48 (12%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFS 42
          M    +   +   A   R+  +++N++N +T        +    V F 
Sbjct: 3  MFLGIDAAASGLTAERLRMDVISNNIANANTTRAQGGGAYHRRYVVFQ 50


>gi|289609890|emb|CBI60366.1| unnamed protein product [Sordaria macrospora]
          Length = 90

 Score = 61.4 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 44/90 (48%), Gaps = 5/90 (5%)

Query: 19  LSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS--GKEYLSKEVGSFIST 76
           +++++ N++N  T GF+  + +F++V+ +       ++    +           G+ + +
Sbjct: 1   MASISHNLANVGTTGFKKSRAEFADVIASNLAVAPTQMVGSGTVVKGNRQQFGEGNLVQS 60

Query: 77  GTELDFALEGDAWF---ALESPRGIILTRD 103
            + LD A+ GD +F      + +G+  TR+
Sbjct: 61  SSSLDIAIAGDGFFALKPDPNKQGLAFTRN 90


>gi|167037671|ref|YP_001665249.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|167040332|ref|YP_001663317.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter sp. X514]
 gi|256750738|ref|ZP_05491623.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter
           ethanolicus CCSD1]
 gi|300914416|ref|ZP_07131732.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter sp. X561]
 gi|307264864|ref|ZP_07546426.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|307724348|ref|YP_003904099.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter sp. X513]
 gi|320116086|ref|YP_004186245.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|326389485|ref|ZP_08211052.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter
           ethanolicus JW 200]
 gi|166854572|gb|ABY92981.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter sp. X514]
 gi|166856505|gb|ABY94913.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|256750321|gb|EEU63340.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter
           ethanolicus CCSD1]
 gi|300889351|gb|EFK84497.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter sp. X561]
 gi|306920122|gb|EFN50334.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|307581409|gb|ADN54808.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter sp. X513]
 gi|319929177|gb|ADV79862.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|325994490|gb|EGD52915.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter
           ethanolicus JW 200]
          Length = 147

 Score = 61.4 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 24/48 (50%), Gaps = 1/48 (2%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           + G++E  N N + EM  MI  T+ + +  T  + ++    +++  I 
Sbjct: 99  QNGYVEYPNVNIVSEMVDMISATRAYEANVTAFNASKAMFQKSL-EIG 145



 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 8/30 (26%), Positives = 16/30 (53%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV 32
          +S +I  +   A   R+  +A N++N +T 
Sbjct: 5  SSMDISASGLTAERLRMDIIAQNIANVNTT 34


>gi|304438470|ref|ZP_07398410.1| flagellar basal-body rod protein FlgC [Selenomonas sp. oral taxon
           149 str. 67H29BP]
 gi|304368553|gb|EFM22238.1| flagellar basal-body rod protein FlgC [Selenomonas sp. oral taxon
           149 str. 67H29BP]
          Length = 151

 Score = 61.4 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 43/135 (31%), Gaps = 6/135 (4%)

Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
           R ++    + ++ +         +   +             G  S   +    M      
Sbjct: 18  RLRMDVISNNIANANTTRTQGGGAYHRRYVVFQPREKGHGIGFESFLARASNRMRPGDGV 77

Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224
            + G       G     P  P  +        G++E  N N + EM  MI  ++ + + T
Sbjct: 78  RAVGIRTDNTQGPLVYEPGHPDANAD------GYVERPNVNIVAEMVDMISASRGYEANT 131

Query: 225 TLIDENEKSMLEAIR 239
           T I+  +  +  A+R
Sbjct: 132 TTINAAKSMVNAALR 146



 Score = 53.3 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 18/48 (37%), Gaps = 6/48 (12%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFS 42
          M    +   +   A   R+  +++N++N +T        +    V F 
Sbjct: 3  MFLGIDTAASGLTAERLRMDVISNNIANANTTRTQGGGAYHRRYVVFQ 50


>gi|309788145|ref|ZP_07682751.1| flagellar basal-body rod protein flgF [Shigella dysenteriae 1617]
 gi|308923997|gb|EFP69498.1| flagellar basal-body rod protein flgF [Shigella dysenteriae 1617]
          Length = 123

 Score = 61.0 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 26/67 (38%), Gaps = 1/67 (1%)

Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
           S  S       L+    + V  G LE SN N++  M  MI   ++F     +I   + + 
Sbjct: 54  SAESQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNA 113

Query: 235 LEAIRNI 241
             A   +
Sbjct: 114 GRA-NQL 119


>gi|330953722|gb|EGH53982.1| flagellar hook protein FlgE [Pseudomonas syringae Cit 7]
          Length = 162

 Score = 61.0 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 30/98 (30%), Gaps = 5/98 (5%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLED 201
             + K +VI    L S    QG  +   +                +  +   +    LE+
Sbjct: 63  YTNGKSQVIGQTSLTSFANVQGLAQAGGTNWRETFASGVPVSGAPQSGTLGYITGQALEE 122

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           SN +   E+  +I     + +    I      M   I+
Sbjct: 123 SNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQTTIQ 160


>gi|303240290|ref|ZP_07326809.1| flagellar basal-body rod protein FlgC [Acetivibrio cellulolyticus
           CD2]
 gi|302592200|gb|EFL61929.1| flagellar basal-body rod protein FlgC [Acetivibrio cellulolyticus
           CD2]
          Length = 146

 Score = 61.0 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 23/42 (54%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++E  N + + EM  MI  T+ + +  T I+  +   ++A+
Sbjct: 101 GYVEMPNVDILTEMVNMISATRSYEANVTSINTTKSMAMKAL 142



 Score = 53.7 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 6/47 (12%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDT------VGFRTIKVKFSE 43
          +S +IG +   A   R+ T++ N++N +T        +R   V F E
Sbjct: 5  SSLDIGASGLTAQRLRMDTISQNIANANTTRTENGTAYRRKVVVFEE 51


>gi|289578436|ref|YP_003477063.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter italicus
           Ab9]
 gi|297544712|ref|YP_003677014.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
 gi|289528149|gb|ADD02501.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter italicus
           Ab9]
 gi|296842487|gb|ADH61003.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
          Length = 147

 Score = 61.0 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 24/48 (50%), Gaps = 1/48 (2%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           + G++E  N N + EM  MI  T+ + +  T  + ++    +++  I 
Sbjct: 99  QNGYVEYPNVNIVSEMVDMISATRAYEANVTAFNASKAMFQKSL-EIG 145



 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 7/30 (23%), Positives = 16/30 (53%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV 32
          +S +I  +   A   R+  ++ N++N +T 
Sbjct: 5  SSMDISASGLTAERVRMDVISQNIANVNTT 34


>gi|126653433|ref|ZP_01725529.1| flagellar basal-body rod protein [Bacillus sp. B14905]
 gi|126589789|gb|EAZ83922.1| flagellar basal-body rod protein [Bacillus sp. B14905]
          Length = 67

 Score = 61.0 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 9/59 (15%), Positives = 25/59 (42%), Gaps = 3/59 (5%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDIDQKI 56
          M   F       +  ++R   +++N++N +T GF+  +     F +++ +     +   
Sbjct: 1  MFKGFYTVATGMITQQRRTELLSNNLANANTPGFKADQSTIRSFPDMLMSSIGKTNALP 59


>gi|320529387|ref|ZP_08030475.1| flagellar basal-body rod protein FlgC [Selenomonas artemidis F0399]
 gi|320138353|gb|EFW30247.1| flagellar basal-body rod protein FlgC [Selenomonas artemidis F0399]
          Length = 151

 Score = 61.0 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           G++E  N N + EM  MI  ++ + + TT I+  +  +  A+R I S
Sbjct: 104 GYVERPNVNIVSEMVDMISASRGYEANTTTINAAKSMVNAALR-IGS 149



 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 18/48 (37%), Gaps = 6/48 (12%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFS 42
          M    +   +   A   R+  +++N++N +T        +    V F 
Sbjct: 3  MFLGIDAAASGLTAERLRMDVISNNIANANTTRAQGGGAYHRRYVVFQ 50


>gi|291526818|emb|CBK92404.1| flagellar hook-associated protein FlgK [Eubacterium rectale
          M104/1]
          Length = 569

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 30/58 (51%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
          SF +G +     +  L+T A+NM+N +T G+   +V+FS+     +N+     +   S
Sbjct: 7  SFYVGSSGLKNSQNALNTTANNMANVNTTGYVRQQVRFSDKHYITRNNPTAGTNIQQS 64


>gi|332758237|gb|EGJ88560.1| flagellar basal-body rod protein flgF [Shigella flexneri 4343-70]
 gi|332767685|gb|EGJ97878.1| hypothetical protein SF293071_1339 [Shigella flexneri 2930-71]
 gi|333008280|gb|EGK27754.1| flagellar basal-body rod protein flgF [Shigella flexneri K-272]
 gi|333019770|gb|EGK39042.1| flagellar basal-body rod protein flgF [Shigella flexneri K-227]
          Length = 123

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 26/67 (38%), Gaps = 1/67 (1%)

Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
           S  +       L+    + V  G LE SN N++  M  MI   ++F     +I   + + 
Sbjct: 54  SAETQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNA 113

Query: 235 LEAIRNI 241
             A   +
Sbjct: 114 GRA-NQL 119


>gi|289679023|ref|ZP_06499913.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv.
          syringae FF5]
          Length = 92

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 39/93 (41%), Gaps = 2/93 (2%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M     + ++            A+N++N  T GF     +   +   +  ++    ++  
Sbjct: 1  MDKLLYVAMSGASENAIAQKAHANNLANVSTNGFMRDLEQARSM--PVFGEVMPSRAYAM 58

Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALE 93
          S +       G+ + TG ELD A++GD W A++
Sbjct: 59 SERPGTDFSAGAMVQTGRELDIAVKGDGWIAVQ 91


>gi|302338075|ref|YP_003803281.1| flagellar basal-body rod protein FlgC [Spirochaeta smaragdinae DSM
           11293]
 gi|301635260|gb|ADK80687.1| flagellar basal-body rod protein FlgC [Spirochaeta smaragdinae DSM
           11293]
          Length = 152

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 24/46 (52%), Gaps = 1/46 (2%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G++E  N N + EM  M+  ++ + +   +++ ++   + A+  I 
Sbjct: 107 GYVEMPNVNIVEEMVDMMSASRSYEANVAVVNGSKAMFMRAL-EIG 151



 Score = 53.3 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 6/47 (12%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43
          +S N+      A   RL  V+DN++N  T     G  FR  +V F  
Sbjct: 5  SSINVAATGMSAQRLRLDVVSDNIANASTARTPEGGPFRRSRVIFRA 51


>gi|255021352|ref|ZP_05293400.1| Flagellar basal-body rod protein flgC [Acidithiobacillus caldus
           ATCC 51756]
 gi|254969215|gb|EET26729.1| Flagellar basal-body rod protein flgC [Acidithiobacillus caldus
           ATCC 51756]
          Length = 138

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 7/47 (14%), Positives = 24/47 (51%), Gaps = 1/47 (2%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           G+++  N N + EM  MI  ++ + +   +++  +  + + +  + +
Sbjct: 93  GYVQMPNVNPVDEMVNMISASRAYQANVNVMNTTKALLQKTL-TLGA 138



 Score = 37.9 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/101 (15%), Positives = 31/101 (30%), Gaps = 7/101 (6%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDIDQKISF 58
            ++  +A  A   RL+ VA N++N ++     G  +R  +V F+             +  
Sbjct: 7   LDVASSALTAQSYRLNVVASNLANANSATSSDGQPYRAREVVFAATPLH-SGQAPAGVEG 65

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
           V              +          EG       +P   +
Sbjct: 66  VQVAGVVEKPGPLKLVYEPGNPAANAEGYVQMPNVNPVDEM 106


>gi|238922533|ref|YP_002936046.1| flagellar hook-associated protein FlgK [Eubacterium rectale ATCC
          33656]
 gi|238874205|gb|ACR73912.1| flagellar hook-associated protein FlgK [Eubacterium rectale ATCC
          33656]
 gi|291526373|emb|CBK91960.1| flagellar hook-associated protein FlgK [Eubacterium rectale DSM
          17629]
          Length = 569

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 30/58 (51%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
          SF +G +     +  L+T A+NM+N +T G+   +V+FS+     +N+     +   S
Sbjct: 7  SFYVGSSGLKNSQNALNTTANNMANVNTTGYVRQQVRFSDKHYITRNNPTAGTNIQQS 64


>gi|313650472|gb|EFS14879.1| flagellar basal-body rod protein flgF [Shigella flexneri 2a str.
           2457T]
 gi|323165585|gb|EFZ51372.1| flagellar basal-body rod protein flgF [Shigella sonnei 53G]
 gi|332758236|gb|EGJ88559.1| flagellar basal-body rod protein flgF [Shigella flexneri 4343-70]
 gi|332759657|gb|EGJ89962.1| flagellar basal-body rod protein flgF [Shigella flexneri 2747-71]
 gi|332761422|gb|EGJ91706.1| flagellar basal-body rod protein flgF [Shigella flexneri K-671]
 gi|332767684|gb|EGJ97877.1| flagella basal body rod family protein [Shigella flexneri 2930-71]
 gi|333004886|gb|EGK24406.1| flagellar basal-body rod protein flgF [Shigella flexneri VA-6]
 gi|333005551|gb|EGK25069.1| flagellar basal-body rod protein flgF [Shigella flexneri K-218]
 gi|333008279|gb|EGK27753.1| flagellar basal-body rod protein flgF [Shigella flexneri K-272]
 gi|333019416|gb|EGK38699.1| flagellar basal-body rod protein flgF [Shigella flexneri K-304]
 gi|333019769|gb|EGK39041.1| flagellar basal-body rod protein flgF [Shigella flexneri K-227]
          Length = 111

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 36/113 (31%), Gaps = 2/113 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N  T GFR        V   ++       + V 
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113
           +         G    T   LD AL+ D W          +     F++   G+
Sbjct: 59  ASTPGADMTPGKMDYTSRPLDVALQQDGWPCRPLTAAKGIRVMAAFRLIPPGN 111


>gi|332092842|gb|EGI97910.1| flagellar basal-body rod protein flgF [Shigella dysenteriae 155-74]
          Length = 123

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 26/67 (38%), Gaps = 1/67 (1%)

Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
           S  +       L+    + V  G LE SN N++  M  MI   ++F     +I   + + 
Sbjct: 54  SAETQATRGPVLQADPTLRVMSGGLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNA 113

Query: 235 LEAIRNI 241
             A   +
Sbjct: 114 GRA-NQL 119


>gi|320354315|ref|YP_004195654.1| flagellar basal-body rod protein FlgC [Desulfobulbus propionicus
           DSM 2032]
 gi|320122817|gb|ADW18363.1| flagellar basal-body rod protein FlgC [Desulfobulbus propionicus
           DSM 2032]
          Length = 145

 Score = 60.3 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 1/47 (2%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           G++E  N N + EM  M+  T+ + + TT I   ++  + A+ +I S
Sbjct: 100 GYVEMPNVNVLKEMVDMMSTTRSYEANTTTIKSAKRMAMRAL-DIGS 145



 Score = 44.1 bits (102), Expect = 0.019,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 8/51 (15%)

Query: 1  MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSE 43
          M   T+F+I  +   A   RL+T++ N++N++T        ++   V F  
Sbjct: 1  MDIFTTFDIAASGLKAQTMRLNTISANLANSETTSTPEGGPYKKKSVVFQT 51


>gi|220932527|ref|YP_002509435.1| flagellar basal-body rod protein FlgC [Halothermothrix orenii H
           168]
 gi|219993837|gb|ACL70440.1| flagellar basal-body rod protein FlgC [Halothermothrix orenii H
           168]
          Length = 145

 Score = 60.3 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 22/43 (51%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N   EM  MI  ++ + +  T ++  +   L+A++
Sbjct: 99  GYVAMPNVNITTEMVDMISASRAYEANVTALNTAKNMALKALQ 141



 Score = 56.4 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 6/49 (12%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43
          M  S NI  +   A   R+  +ADN++N +T     G  +R     F E
Sbjct: 1  MLDSLNISASGLTAQRLRMDIIADNIANVNTTRTEDGGPYRRKLPVFRE 49


>gi|207110390|ref|ZP_03244552.1| flagellar hook protein FlgE [Helicobacter pylori HPKX_438_CA4C1]
          Length = 107

 Score = 60.3 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 33/101 (32%), Gaps = 16/101 (15%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS----------------GVTVKR 196
           + +A +G+ +    QG  +   +           E+                     ++ 
Sbjct: 7   EPVARIGILAFTNDQGLRKIGGNLYEMQEGTINGENRPLSGNPILGWDEEGKLKFGKIRH 66

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
            +LE SN N+   +  +I + + ++         +  + EA
Sbjct: 67  KYLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEA 107


>gi|297570257|ref|YP_003691601.1| protein of unknown function DUF1078 domain protein
          [Desulfurivibrio alkaliphilus AHT2]
 gi|296926172|gb|ADH86982.1| protein of unknown function DUF1078 domain protein
          [Desulfurivibrio alkaliphilus AHT2]
          Length = 118

 Score = 60.3 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 34/83 (40%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M T  +  L+  LAL+Q+ +  A N +N +T G++ ++V   E V     +   +     
Sbjct: 1  MVTGIHSALSGLLALQQKTAATAHNTANVNTDGYKKVRVTLHEGVAPGTVEPRAEKIETP 60

Query: 61 SGKEYLSKEVGSFISTGTELDFA 83
                    G  +   + +D A
Sbjct: 61 GPVVQEQTAAGPEMVEKSNVDLA 83



 Score = 56.0 bits (133), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 5/42 (11%), Positives = 18/42 (42%)

Query: 198 FLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +E SN +   EM  ++   + + +   ++   ++ +   + 
Sbjct: 74  MVEKSNVDLAQEMPNLMLSRRYYQANLKVVQSEDERLGSLLN 115


>gi|332088747|gb|EGI93859.1| flagellar basal-body rod protein flgF [Shigella boydii 5216-82]
          Length = 123

 Score = 60.3 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 23/55 (41%), Gaps = 1/55 (1%)

Query: 187 EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           +    + V  G LE SN N++  M  MI   ++F     +I   + +   A   +
Sbjct: 66  QADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRA-NQL 119


>gi|302389656|ref|YP_003825477.1| flagellar basal-body rod protein FlgC [Thermosediminibacter oceani
           DSM 16646]
 gi|302200284|gb|ADL07854.1| flagellar basal-body rod protein FlgC [Thermosediminibacter oceani
           DSM 16646]
          Length = 147

 Score = 60.3 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 24/48 (50%), Gaps = 1/48 (2%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           + G++   N N + EM  MI  T+ + +  T I+  +  + +A+  I 
Sbjct: 99  QMGYVRMPNVNIVTEMVDMISATRSYEANITAINSAKGMITKAL-EIG 145



 Score = 59.9 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 6/47 (12%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43
           S  I  +   A   R+  +++N++N +T     G  +R  +V F E
Sbjct: 5  RSLEISASGLTAQRLRMDVISNNIANVNTTRTEEGGPYRRQRVIFQE 51


>gi|317052365|ref|YP_004113481.1| flagellar basal-body rod protein FlgC [Desulfurispirillum indicum
           S5]
 gi|316947449|gb|ADU66925.1| flagellar basal-body rod protein FlgC [Desulfurispirillum indicum
           S5]
          Length = 151

 Score = 60.3 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 23/42 (54%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N N + EM  MI  ++ + +  T+I+  +K   EA+
Sbjct: 105 GYVAYPNINVVEEMTDMITASRSYEANITMIETIKKMANEAL 146



 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 20/45 (44%), Gaps = 6/45 (13%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFS 42
             I  +A  A  QR++ ++ N++N  T     G  ++   + F 
Sbjct: 6  GLKISSSALFAQRQRMNVISSNLANAHTTRAEDGTYYKRKDLVFK 50


>gi|238927420|ref|ZP_04659180.1| flagellar basal body rod protein [Selenomonas flueggei ATCC 43531]
 gi|238884702|gb|EEQ48340.1| flagellar basal body rod protein [Selenomonas flueggei ATCC 43531]
          Length = 151

 Score = 59.9 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/139 (15%), Positives = 44/139 (31%), Gaps = 7/139 (5%)

Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
           R ++    + ++ +         +   +             G  S   +    +      
Sbjct: 18  RLRMDVISNNIANANTTRTQGGGAYHRRYVVFQPREKGTGIGFESFLARASNRLRPGDGV 77

Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224
            +         G     P  P  +        G++E  N N + EM  MI  ++ + + T
Sbjct: 78  RAVSIQADNTQGPLVYEPGHPDANAD------GYVERPNVNIVAEMVDMISASRGYEANT 131

Query: 225 TLIDENEKSMLEAIRNIAS 243
           T I+  +  +  A+R I S
Sbjct: 132 TTINAAKSMVSAALR-IGS 149



 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 18/48 (37%), Gaps = 6/48 (12%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFS 42
          M    +   +   A   R+  +++N++N +T        +    V F 
Sbjct: 3  MFLGIDAAASGLTAERLRMDVISNNIANANTTRTQGGGAYHRRYVVFQ 50


>gi|161526188|ref|YP_001581200.1| flagellar basal body rod protein FlgC [Burkholderia multivorans
           ATCC 17616]
 gi|189349096|ref|YP_001944724.1| flagellar basal body rod protein FlgC [Burkholderia multivorans
           ATCC 17616]
 gi|221199737|ref|ZP_03572780.1| flagellar basal-body rod protein FlgC [Burkholderia multivorans
           CGD2M]
 gi|221208658|ref|ZP_03581658.1| flagellar basal-body rod protein FlgC [Burkholderia multivorans
           CGD2]
 gi|221215569|ref|ZP_03588532.1| flagellar basal-body rod protein FlgC [Burkholderia multivorans
           CGD1]
 gi|160343617|gb|ABX16703.1| flagellar basal-body rod protein FlgC [Burkholderia multivorans
           ATCC 17616]
 gi|189333118|dbj|BAG42188.1| flagellar basal-body rod protein [Burkholderia multivorans ATCC
           17616]
 gi|221164557|gb|EED97040.1| flagellar basal-body rod protein FlgC [Burkholderia multivorans
           CGD1]
 gi|221171469|gb|EEE03916.1| flagellar basal-body rod protein FlgC [Burkholderia multivorans
           CGD2]
 gi|221179976|gb|EEE12380.1| flagellar basal-body rod protein FlgC [Burkholderia multivorans
           CGD2M]
          Length = 141

 Score = 59.9 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 25/47 (53%), Gaps = 1/47 (2%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           G+++  N + + EM  MI  ++ + +    ++  ++ ML+ +  I S
Sbjct: 96  GYVQMPNVDPVQEMVNMISASRSYQANVETLNTAKQLMLKTL-TIGS 141



 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 34/105 (32%), Gaps = 7/105 (6%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDT-VG-----FRTIKVKFS-EVVGAIKNDIDQ 54
              F +  +A  A  QRL+  A N++N D+  G     ++  +V F+ + +G  +    Q
Sbjct: 5   MNIFGVAGSALSAQSQRLNVTASNLANADSATGPDGKPYKAKQVVFATDPIGGARTASGQ 64

Query: 55  KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
            +  V   K                      G        P   +
Sbjct: 65  GVGGVRVTKVIDDPSPMKSTYDPANPAADANGYVQMPNVDPVQEM 109


>gi|325529011|gb|EGD06024.1| flagellar basal body rod protein FlgC [Burkholderia sp. TJI49]
          Length = 141

 Score = 59.9 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 25/47 (53%), Gaps = 1/47 (2%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           G+++  N + + EM  MI  ++ + +    ++  ++ ML+ +  I S
Sbjct: 96  GYVQMPNVDPVQEMVNMISASRSYQANVETLNTAKQLMLKTL-TIGS 141



 Score = 41.8 bits (96), Expect = 0.086,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 34/105 (32%), Gaps = 7/105 (6%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDT-VG-----FRTIKVKFS-EVVGAIKNDIDQ 54
              F +  +A  A  QRL+  A N++N D+  G     ++  +V F+ + +G  +    Q
Sbjct: 5   MNIFGVAGSALSAQSQRLNVTASNLANADSATGPDGKPYKAKQVVFATDPIGGARTASGQ 64

Query: 55  KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
            +  V   K                      G        P   +
Sbjct: 65  GVGGVRVTKVVDDPSPMKSTYDPANPAADANGYVQMPNVDPVQEM 109


>gi|78044505|ref|YP_359818.1| flagellar hook-associated protein FlgK [Carboxydothermus
          hydrogenoformans Z-2901]
 gi|77996620|gb|ABB15519.1| flagellar hook-associated protein 1 [Carboxydothermus
          hydrogenoformans Z-2901]
          Length = 473

 Score = 59.9 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 21/43 (48%), Gaps = 1/43 (2%)

Query: 1  MQT-SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS 42
          M   S    L++  A +  L   + N++N +T G+   +V F+
Sbjct: 1  MFNISLETALSSLRAQQLALDITSHNIANANTPGYTRQRVNFA 43



 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 16/43 (37%)

Query: 200 EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           E    +   EM  MI     +++   ++   ++ M   I  + 
Sbjct: 427 ESGGVSIDEEMANMILYQNAYSAAARIVTAIDEMMDIVINRMG 469


>gi|292669734|ref|ZP_06603160.1| flagellar basal-body rod protein FlgC [Selenomonas noxia ATCC
           43541]
 gi|292648531|gb|EFF66503.1| flagellar basal-body rod protein FlgC [Selenomonas noxia ATCC
           43541]
          Length = 151

 Score = 59.9 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 23/43 (53%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++E  N N + EM  MI  ++ + +  T I+  +  +  A+R
Sbjct: 104 GYVERPNVNIVAEMVDMISASRGYEANATTINAAKSMVTAALR 146



 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 18/48 (37%), Gaps = 6/48 (12%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFS 42
          M    +   +   A   R+  +++N++N +T        +    V F 
Sbjct: 3  MFLGIDAAASGLTAERLRMDVISNNIANANTTRAQGGGAYHRRYVVFQ 50


>gi|89895737|ref|YP_519224.1| hypothetical protein DSY2991 [Desulfitobacterium hafniense Y51]
 gi|89335185|dbj|BAE84780.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 176

 Score = 59.9 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 26/59 (44%)

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           N         +   +  G++   N N + EM  MI  ++ + +  T ++ ++  M +A+
Sbjct: 113 NPDSPDAAQTTEDGIPAGYVRMPNVNIVTEMVDMISASRAYEANVTALNASKAMMTKAL 171



 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 8/29 (27%), Positives = 16/29 (55%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTV 32
          S +I  +   A   RL  +++N++N +T 
Sbjct: 6  SMDISASGLTAQRLRLDVISNNIANINTT 34


>gi|20807891|ref|NP_623062.1| flagellar basal body rod protein [Thermoanaerobacter tengcongensis
           MB4]
 gi|20516456|gb|AAM24666.1| Flagellar basal body rod protein [Thermoanaerobacter tengcongensis
           MB4]
          Length = 146

 Score = 59.9 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 23/48 (47%), Gaps = 1/48 (2%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           ++G++   N N + EM  MI  T+ + +  T  +  +    +++  I 
Sbjct: 99  QQGYVSYPNVNIVAEMVDMISATRAYEANVTAFNAAKSMFQKSL-EIG 145



 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 6/48 (12%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44
          +S +I      A   R+  V+ N++N +T     G  +R   V F E+
Sbjct: 5  SSMDISATGLTAERVRMDVVSQNIANANTTRTVQGGPYRRKLVVFKEI 52


>gi|300114793|ref|YP_003761368.1| flagellar hook-associated protein FlgK [Nitrosococcus watsonii
          C-113]
 gi|299540730|gb|ADJ29047.1| flagellar hook-associated protein FlgK [Nitrosococcus watsonii
          C-113]
          Length = 647

 Score = 59.9 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 29/79 (36%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
            IG +  LA ++ L+T + N++N +T GF   + + +  +               +   
Sbjct: 7  LGIGASGLLAAQRALATTSHNIANVNTPGFSRQRAELAARLPEFTGQGFIGTGVDVTTVR 66

Query: 65 YLSKEVGSFISTGTELDFA 83
                 +  +     ++A
Sbjct: 67 RAYDSFLTEQARHATSEYA 85



 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 13/41 (31%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E   +I   Q F +   +I   +      +  + 
Sbjct: 606 SGVNLEEEAANLIRFQQAFQAAARVISTADTMFQTLLGAVG 646


>gi|219670161|ref|YP_002460596.1| flagellar basal-body rod protein FlgC [Desulfitobacterium hafniense
           DCB-2]
 gi|219540421|gb|ACL22160.1| flagellar basal-body rod protein FlgC [Desulfitobacterium hafniense
           DCB-2]
          Length = 176

 Score = 59.5 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 26/59 (44%)

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           N         +   +  G++   N N + EM  MI  ++ + +  T ++ ++  M +A+
Sbjct: 113 NPDSPDAAQTTEDGIPAGYVRMPNVNIVTEMVDMISASRAYEANVTALNASKAMMSKAL 171



 Score = 49.1 bits (115), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 8/29 (27%), Positives = 16/29 (55%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTV 32
          S +I  +   A   RL  +++N++N +T 
Sbjct: 6  SMDISASGLTAQRLRLDVISNNIANINTT 34


>gi|73532548|dbj|BAE19832.1| flagellar hook protein [Edwardsiella tarda]
          Length = 76

 Score = 59.5 bits (142), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 36/81 (44%), Gaps = 5/81 (6%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
            A   +L  + +N++N+ TVGF++  V F+++         +    V         + G
Sbjct: 1  MNAASSQLDVIGNNIANSQTVGFKSGSVTFADMFA-----GSKVGLGVTVASVNQDFKDG 55

Query: 72 SFISTGTELDFALEGDAWFAL 92
          +  +T   LD A+ G  +F +
Sbjct: 56 TTTTTNRGLDVAISGQGFFRM 76


>gi|89069822|ref|ZP_01157157.1| flagellar basal-body rod protein FlgC [Oceanicola granulosus
          HTCC2516]
 gi|89044623|gb|EAR50739.1| flagellar basal-body rod protein FlgC [Oceanicola granulosus
          HTCC2516]
          Length = 128

 Score = 59.5 bits (142), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 14/74 (18%), Positives = 31/74 (41%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
           + ++  +   A   RL  V++N++N+DT G+R   V F +  GA   ++      +   
Sbjct: 6  QALDVVASGLRAQSARLRHVSENIANSDTPGYRRKTVTFRDAFGATAGEVAVGPVRLDDS 65

Query: 63 KEYLSKEVGSFIST 76
                +    ++ 
Sbjct: 66 ALERIFDPAHPLAD 79



 Score = 46.0 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 5/47 (10%), Positives = 17/47 (36%)

Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            G  E SN + + E+       + + +   + ++  +     +  + 
Sbjct: 81  SGHFEGSNVDLLIEIADAREAQRSYEANLKMFEQVRQMSTSLLDLLR 127


>gi|154174960|ref|YP_001407311.1| hypothetical protein CCV52592_2049 [Campylobacter curvus 525.92]
 gi|153793155|gb|EAU00899.2| conserved hypothetical protein [Campylobacter curvus 525.92]
          Length = 533

 Score = 59.5 bits (142), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 18/122 (14%), Positives = 43/122 (35%), Gaps = 8/122 (6%)

Query: 125 DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG--------FVRRENSG 176
           D  +  +      +          + +   +A + LY     QG        +    NSG
Sbjct: 407 DGYAEGLLSKYSMDDSGNVIANFDNTRTFPVAKVALYHFQNEQGVSKVGDNLYEATPNSG 466

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
            +        + + G  +    LE SN +    + ++I + + +++    I  +++ +  
Sbjct: 467 EAFFYKNKAGQTIYGANIIANKLEMSNVDLGQALTEVIVIQKAYDASAKSITTSDEMIQT 526

Query: 237 AI 238
           AI
Sbjct: 527 AI 528



 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/116 (18%), Positives = 40/116 (34%), Gaps = 7/116 (6%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK------NDIDQK 55
              F  G++        +   ++N++N +  GF+    +F  ++             DQ 
Sbjct: 1   MRGFYNGVSGIKTQSFGMDVWSNNIANINNAGFKASIPEFKNLINQSAVSAGNYPTTDQV 60

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF-ALESPRGIILTRDGRFKVTD 110
                     L    G F +T    D A+ G  +F   ++   I  TR G F +  
Sbjct: 61  GLGAVKQTTALKMSNGGFQTTDKNFDLAIGGKGFFGVTDANGKIYYTRTGSFNIDA 116


>gi|254251189|ref|ZP_04944507.1| flagella basal body rod protein [Burkholderia dolosa AUO158]
 gi|124893798|gb|EAY67678.1| flagella basal body rod protein [Burkholderia dolosa AUO158]
          Length = 141

 Score = 59.5 bits (142), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 25/47 (53%), Gaps = 1/47 (2%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           G+++  N + + EM  MI  ++ + +    ++  ++ ML+ +  I S
Sbjct: 96  GYVQMPNVDPVQEMVNMISASRSYQANVETLNTAKQLMLKTL-TIGS 141



 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 20/100 (20%), Positives = 40/100 (40%), Gaps = 9/100 (9%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDT-VG-----FRTIKVKFS-EVVGAIKNDIDQ 54
              F +  +A  A  QRL+  A N++N D+  G     ++  +V F+ + +G  +    Q
Sbjct: 5   MNIFGVAGSALSAQSQRLNVTASNLANADSATGPDGKPYKAKQVVFATDPMGGARTASGQ 64

Query: 55  KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES 94
            +  V   K           ST    + A + + +  + +
Sbjct: 65  GVGGVRVTKVIDD--PSPMKSTYDPANPAADENGYVQMPN 102


>gi|90577350|ref|ZP_01233161.1| putative flagellar hook-associated protein [Vibrio angustum S14]
 gi|90440436|gb|EAS65616.1| putative flagellar hook-associated protein [Vibrio angustum S14]
          Length = 455

 Score = 59.5 bits (142), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 23/67 (34%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
              NIGL    A +  L   A N++N +T GF   +   + + G         +   + 
Sbjct: 1  MNMINIGLTGLNANKTALDVTAHNIANVNTPGFSRQQAMMNALAGNDILSAGSGVEIASI 60

Query: 62 GKEYLSK 68
           +     
Sbjct: 61 RRISDQF 67



 Score = 36.8 bits (83), Expect = 2.6,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 15/40 (37%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           S  NS  E   ++  T  + +   +I    +     +R +
Sbjct: 416 SAVNSDEEAANLMTFTNAYQANMKVISTANELFDSVLRLL 455


>gi|46204473|ref|ZP_00049952.2| COG1749: Flagellar hook protein FlgE [Magnetospirillum
           magnetotacticum MS-1]
          Length = 127

 Score = 59.5 bits (142), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 14/89 (15%), Positives = 31/89 (34%), Gaps = 1/89 (1%)

Query: 155 IATMGLYSVDMSQGFVRRE-NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQM 213
           +A + +       G       +          +  L   TV    +E SN +   E  +M
Sbjct: 39  LARVEVAQFVNPDGLKADSLGNYQQTVASGEAISGLKDTTVVGANVEQSNTDIAAEFSKM 98

Query: 214 IHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           I   Q +++ T ++   +  + + +  I 
Sbjct: 99  IVTQQAYSANTRVMSTAQTMISDLLNVIR 127


>gi|114320055|ref|YP_741738.1| flagellar basal-body rod protein FlgC [Alkalilimnicola ehrlichii
           MLHE-1]
 gi|114226449|gb|ABI56248.1| flagellar basal-body rod protein FlgC [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 151

 Score = 59.5 bits (142), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 27/44 (61%)

Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +G++  SN N + EM  MI  ++ + +   +++ +++ +L+ +R
Sbjct: 104 QGYVYRSNVNPVEEMTNMISASRSYQNNVEVMNTSKELLLQTLR 147



 Score = 42.5 bits (98), Expect = 0.047,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 6/49 (12%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVV 45
            F++  +   A + RL+TVA N++N++TV       +R+ +  F+ V+
Sbjct: 5  KVFDVSGSGMNAQQTRLNTVASNLANSETVAGSPEQAYRSRQPVFASVL 53


>gi|119899029|ref|YP_934242.1| flagellar basal-body rod protein FlgC [Azoarcus sp. BH72]
 gi|119671442|emb|CAL95355.1| flagellar basal-body rod protein FlgC [Azoarcus sp. BH72]
          Length = 146

 Score = 59.1 bits (141), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 22/43 (51%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++E  N N + EM  MI  ++ + +   +++  +  +   ++
Sbjct: 101 GYVEMPNVNVVEEMVNMISASRSYQNNAEVMNTAQTLLQRTLQ 143



 Score = 38.7 bits (88), Expect = 0.76,   Method: Composition-based stats.
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 6/49 (12%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43
          M   F I  +A  A   RL+T A N++N D+V    G  +R  +V F+ 
Sbjct: 3  MLNVFQIAGSALNAQSLRLNTTASNLANADSVIAEDGQPYRAKQVVFAA 51


>gi|91202525|emb|CAJ72164.1| strongly similar to flagellar basal-body rod protein FlgC
           [Candidatus Kuenenia stuttgartiensis]
          Length = 147

 Score = 59.1 bits (141), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 23/46 (50%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           GF+E  N N   EM  ++  ++ + +   +I+ ++    +A+  I 
Sbjct: 101 GFVEMPNVNIATEMVDLVTASRSYEANLAVINSSKDITNQALSIIG 146


>gi|225377360|ref|ZP_03754581.1| hypothetical protein ROSEINA2194_03008 [Roseburia inulinivorans
          DSM 16841]
 gi|225210785|gb|EEG93139.1| hypothetical protein ROSEINA2194_03008 [Roseburia inulinivorans
          DSM 16841]
          Length = 51

 Score = 59.1 bits (141), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 8/36 (22%), Positives = 17/36 (47%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRT 36
          M           +  ++RL  + +N++N DT G++ 
Sbjct: 1  MIKGLYTAYTGMVNEQKRLDVLTNNLANADTNGYKK 36


>gi|332799171|ref|YP_004460670.1| flagellar basal-body rod protein FlgC [Tepidanaerobacter sp. Re1]
 gi|332696906|gb|AEE91363.1| flagellar basal-body rod protein FlgC [Tepidanaerobacter sp. Re1]
          Length = 143

 Score = 59.1 bits (141), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 22/43 (51%)

Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            G++   N N + EM  MI  T+ + +  T I+  +  M +A+
Sbjct: 96  SGYVMLPNVNIVTEMVDMISATRSYEANVTAINSAKSMMSKAL 138



 Score = 55.3 bits (131), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 6/47 (12%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43
           S +I  +   A   RL T+++N++N +T     G  F+  +V F E
Sbjct: 5  NSLDISASGLTAQRLRLDTISNNIANANTTRTEEGGPFQRERVVFQE 51


>gi|296274397|ref|YP_003657028.1| hypothetical protein Arnit_2873 [Arcobacter nitrofigilis DSM
          7299]
 gi|296098571|gb|ADG94521.1| protein of unknown function DUF1078 domain protein [Arcobacter
          nitrofigilis DSM 7299]
          Length = 913

 Score = 58.7 bits (140), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 34/82 (41%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M  S NI  +   A +  +    +N++N +T G++   V+ SE      + + + ++   
Sbjct: 1  MLDSLNIAQSGLKAAQTAVENTMNNIANVNTEGYKKRVVETSETDQLPGSKLGRGVTVGN 60

Query: 61 SGKEYLSKEVGSFISTGTELDF 82
          + +        + I   T+  +
Sbjct: 61 TIRITSEYLYDNIIKQNTKESY 82



 Score = 46.0 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 4/35 (11%), Positives = 15/35 (42%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            ++  EM  +I     +++   +I   ++ +   +
Sbjct: 875 VDNDEEMINLIKFQSAYSANAKMITTVDEMLKTLL 909


>gi|260893877|ref|YP_003239974.1| flagellar basal-body rod protein FlgC [Ammonifex degensii KC4]
 gi|260866018|gb|ACX53124.1| flagellar basal-body rod protein FlgC [Ammonifex degensii KC4]
          Length = 137

 Score = 58.7 bits (140), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 23/48 (47%), Gaps = 1/48 (2%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           + G++   N N   E+  +I   + + +  T+++  ++   +AI  I 
Sbjct: 89  QNGYVRYPNVNVADEVVDLIGAARAYEANATVLETAKEMARQAI-EIG 135



 Score = 45.6 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 6/77 (7%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDIDQKISFVA 60
          I  +   A   RL  VA+N++N DT     G  +R     F++V+ A K  +      V 
Sbjct: 9  ISGSGLTAERLRLDLVANNLANIDTTRTPAGGPYRRRVPVFAQVLEARKEGMVGMGVRVV 68

Query: 61 SGKEYLSKEVGSFISTG 77
          +  E  S     +    
Sbjct: 69 AIVEDQSPFKVVYDPNH 85


>gi|183220163|ref|YP_001838159.1| flagellar basal body rod protein FlgC [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
 gi|189910283|ref|YP_001961838.1| flagellar basal body rod protein FlgC [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Ames)']
 gi|167774959|gb|ABZ93260.1| Endoflagellar proximal basal body rod protein [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Ames)']
 gi|167778585|gb|ABZ96883.1| Flagellar basal-body rod protein FlgC [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
          Length = 153

 Score = 58.7 bits (140), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 23/41 (56%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
           G++E  N N + EM  MI  ++ + +   LI+ ++  M +A
Sbjct: 107 GYVELPNINIVTEMTDMISASRSYEANVQLINGSKAMMNKA 147



 Score = 56.4 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 27/67 (40%), Gaps = 7/67 (10%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNT----DTVG---FRTIKVKFSEVVGAIKNDID 53
          M  S NI      A   R+  +++N++N+    +T G   FR  +V  + +    +    
Sbjct: 3  MFDSINISATGLSAQRLRMDVISNNIANSTTTRNTNGDGPFRRDRVILTPINLRTQWKSP 62

Query: 54 QKISFVA 60
               VA
Sbjct: 63 VYPFGVA 69


>gi|218509843|ref|ZP_03507721.1| flagellar hook protein FlgE [Rhizobium etli Brasil 5]
          Length = 65

 Score = 58.7 bits (140), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 27/60 (45%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
          S    ++   A   RLSTV+DN++N +T G++ +   FS +V               S +
Sbjct: 6  SMKTAVSGMNAQANRLSTVSDNIANVNTTGYKAVSTSFSSLVLPSSGGNYNSGGVQTSVR 65


>gi|167585192|ref|ZP_02377580.1| flagellar basal-body rod protein FlgC [Burkholderia ubonensis Bu]
          Length = 141

 Score = 58.7 bits (140), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 23/43 (53%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G+++  N + + EM  MI  ++ + +    ++  ++ ML+ + 
Sbjct: 96  GYVQMPNVDPVQEMVNMISASRSYQANVETLNTAKQLMLKTLT 138



 Score = 41.0 bits (94), Expect = 0.15,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 36/99 (36%), Gaps = 7/99 (7%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDT-VG-----FRTIKVKFSEVVGAIKNDIDQK 55
              F +  +A  A  QRL+  A N++N D+  G     ++  +V F+            +
Sbjct: 5   MNIFGVAGSALSAQSQRLNVTASNIANADSATGPDGKPYKAKQVVFAADPQGRARTASGQ 64

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES 94
                   + +  +     ST    + A + + +  + +
Sbjct: 65  GVGGVRVAKVID-DPSPMKSTYDPANPAADANGYVQMPN 102


>gi|83589621|ref|YP_429630.1| flagellar basal-body rod protein FlgC [Moorella thermoacetica ATCC
           39073]
 gi|83572535|gb|ABC19087.1| flagellar basal-body rod protein FlgC [Moorella thermoacetica ATCC
           39073]
          Length = 145

 Score = 58.7 bits (140), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 24/46 (52%), Gaps = 1/46 (2%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G++   N N + EM  MI  ++ + +  T+++  +   L+A+  I 
Sbjct: 100 GYVHLPNINIVNEMVDMITASRAYEANVTVLNAAKAMTLKAL-EIG 144



 Score = 55.3 bits (131), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 14/101 (13%), Positives = 32/101 (31%), Gaps = 10/101 (9%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKF----SEVVGAIKNDID 53
           +  I  +   A   RL  +A+N++N +T     G  +R     F     E +G +     
Sbjct: 6   ALAISASGLTAERLRLDIIANNLANINTTRTPRGGPYRREVPVFAERLQEAMGQLPGRPS 65

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES 94
            +          + ++               + + +  L +
Sbjct: 66  SRAPGAGVEVAAIVEDNSPPRLVYDPSHPDADANGYVHLPN 106


>gi|77165832|ref|YP_344357.1| hypothetical protein Noc_2369 [Nitrosococcus oceani ATCC 19707]
 gi|254433787|ref|ZP_05047295.1| flagellar hook-associated protein FlgK [Nitrosococcus oceani
          AFC27]
 gi|76884146|gb|ABA58827.1| conserved hypothetical protein [Nitrosococcus oceani ATCC 19707]
 gi|207090120|gb|EDZ67391.1| flagellar hook-associated protein FlgK [Nitrosococcus oceani
          AFC27]
          Length = 647

 Score = 58.7 bits (140), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 33/85 (38%), Gaps = 2/85 (2%)

Query: 1  MQTS--FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
          M +S    IG +  LA ++ L+T + N++N +T GF   + + +  +             
Sbjct: 1  MASSDLLGIGASGLLAAQRALATTSHNIANVNTPGFSRQRTELAARLPEFTGQGFIGTGV 60

Query: 59 VASGKEYLSKEVGSFISTGTELDFA 83
            +          +  +  +  ++A
Sbjct: 61 DVTTVRRAYDSFLTEQARYSTSEYA 85



 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 13/41 (31%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E   +I   Q F +   +I   +      +  + 
Sbjct: 606 SGVNLEEEAANLIRFQQAFQAAARVISTADTMFQTLLGAVG 646


>gi|254516995|ref|ZP_05129053.1| flagellar hook-associated protein FlgK [gamma proteobacterium
          NOR5-3]
 gi|219674500|gb|EED30868.1| flagellar hook-associated protein FlgK [gamma proteobacterium
          NOR5-3]
          Length = 639

 Score = 58.3 bits (139), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 16/52 (30%), Positives = 29/52 (55%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M    NIG +A L+L++ +ST   N++N +T GF   +V+F+ +   +    
Sbjct: 1  MADVLNIGTSALLSLQRAISTTGHNIANVNTEGFSRQRVEFAALEPQLSGAG 52


>gi|237653585|ref|YP_002889899.1| flagellar basal-body rod protein FlgC [Thauera sp. MZ1T]
 gi|237624832|gb|ACR01522.1| flagellar basal-body rod protein FlgC [Thauera sp. MZ1T]
          Length = 134

 Score = 58.3 bits (139), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 20/43 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++E  N N + EM  MI  ++ + +   ++      +   ++
Sbjct: 89  GYVEMPNVNVVEEMVNMISASRSYQNNAEVMSTARTLLQRTLQ 131



 Score = 37.5 bits (85), Expect = 1.5,   Method: Composition-based stats.
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 6/49 (12%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43
          M   F I  +A  A   RL+  A N++N D+V    G  +R  +V F+ 
Sbjct: 3  MLNVFQIAGSALNAQSLRLNATASNLANADSVISEDGQPYRAKQVVFAA 51


>gi|206895941|ref|YP_002246669.1| flagellar hook-associated protein FlgK [Coprothermobacter
          proteolyticus DSM 5265]
 gi|206738558|gb|ACI17636.1| flagellar hook-associated protein FlgK [Coprothermobacter
          proteolyticus DSM 5265]
          Length = 540

 Score = 58.3 bits (139), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 17/42 (40%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS 42
          M  S  I   +  A    L   + N++N +T G+   +  F 
Sbjct: 1  MIWSLEIAKRSLQAQMLALDVTSHNIANVNTPGYSRQEAVFR 42



 Score = 38.3 bits (87), Expect = 0.89,   Method: Composition-based stats.
 Identities = 6/42 (14%), Positives = 15/42 (35%), Gaps = 1/42 (2%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           S  N   E   +I   + +     ++   +  +   I N+ +
Sbjct: 499 SGVNLDEEAVNLIRFQKGYAMSARIVSVVDGMLD-LIINMGA 539


>gi|226313072|ref|YP_002772966.1| flagellar basal-body rod protein FlgC [Brevibacillus brevis NBRC
           100599]
 gi|226096020|dbj|BAH44462.1| flagellar basal-body rod protein FlgC [Brevibacillus brevis NBRC
           100599]
          Length = 152

 Score = 58.3 bits (139), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 25/44 (56%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           + G+L   N + M EM  MI  ++ + +  T ++ ++  ML+A+
Sbjct: 106 QDGYLLMPNVDPMKEMVDMISASRSYEANVTALNASKAMMLKAL 149



 Score = 40.2 bits (92), Expect = 0.27,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 17/41 (41%), Gaps = 5/41 (12%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
             N   +A  A   RL T++ N++N +       +  F +
Sbjct: 5  QGINTSASALTANRLRLDTISSNIANAEVT-----RANFVD 40


>gi|295696111|ref|YP_003589349.1| flagellar basal-body rod protein FlgC [Bacillus tusciae DSM 2912]
 gi|295411713|gb|ADG06205.1| flagellar basal-body rod protein FlgC [Bacillus tusciae DSM 2912]
          Length = 155

 Score = 58.3 bits (139), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 14/122 (11%), Positives = 37/122 (30%)

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           A+         +      +   +      G  +         G+         V   +  
Sbjct: 29  ANADTTRRPDGTPGPYRRRMVVMEPQPAPGSFAAALASAGGTGVPEGVRVSAIVEDPSPF 88

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                P  P    +  +   G+++  N +   EM  +I  ++ + +  T +D  +   ++
Sbjct: 89  QLKYDPSNPDAVQNPASPLYGYVQLPNVDVATEMVDLISASRAYEANVTALDAGKMMAVK 148

Query: 237 AI 238
           A+
Sbjct: 149 AL 150



 Score = 43.7 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 10/31 (32%), Positives = 16/31 (51%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32
          Q +F I  +   A   R+  +A N++N DT 
Sbjct: 4  QDTFAISGSGLSAQRLRMDVIAGNIANADTT 34


>gi|255019026|ref|ZP_05291152.1| flagellar basal body rod protein FlgG [Listeria monocytogenes FSL
           F2-515]
          Length = 168

 Score = 58.3 bits (139), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 47/141 (33%), Gaps = 2/141 (1%)

Query: 85  EGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE 144
           +G  +F       I L+R G+F     G L +A G   +           +         
Sbjct: 11  QGSNFFITAKNGEISLSRGGQFHSDQFGFLRTADGANLLSATGEAIQVGQKTSIRAEANG 70

Query: 145 KGEISQKGKVIATMGLYSVDMSQG--FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDS 202
               ++  + +  +G   V  +Q    V+     +  N   T         ++ G +E S
Sbjct: 71  DLYNAETSQYLGRLGTKFVSANQADSLVKDGEGRLHINGVNTMNLPAGQGIIQNGVIETS 130

Query: 203 NANSMYEMGQMIHLTQKFNSI 223
           N +   EM Q++   +   + 
Sbjct: 131 NVDLGVEMVQLMDNQRMVQAS 151


>gi|152990371|ref|YP_001356093.1| flagellar basal-body rod protein FlgC [Nitratiruptor sp. SB155-2]
 gi|151422232|dbj|BAF69736.1| flagellar basal-body rod protein FlgC [Nitratiruptor sp. SB155-2]
          Length = 136

 Score = 58.3 bits (139), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 22/42 (52%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G+++  N + + EM  MI   + + +  T  + ++  +L+ I
Sbjct: 90  GYVQLPNVDPLREMVDMISAMRTYEANLTAFNTHKDMLLKTI 131



 Score = 41.4 bits (95), Expect = 0.098,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 23/59 (38%), Gaps = 6/59 (10%)

Query: 1  MQ-TSFNIGLAAQLALEQRLSTVADNMSNTDT---VG--FRTIKVKFSEVVGAIKNDID 53
          M      +        + R+  VA NM+N ++    G  +R     F E++   +N I 
Sbjct: 1  MIFKGLEVSQTGLSTQKYRMDIVASNMANANSIDDNGVPYRRKIPIFQEILDKEQNRIP 59


>gi|254246963|ref|ZP_04940284.1| Flagellar basal-body rod protein FlgC [Burkholderia cenocepacia
           PC184]
 gi|124871739|gb|EAY63455.1| Flagellar basal-body rod protein FlgC [Burkholderia cenocepacia
           PC184]
          Length = 141

 Score = 58.3 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 24/47 (51%), Gaps = 1/47 (2%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           G+++  N + + EM  MI  ++ + +    ++  +  ML+ +  I S
Sbjct: 96  GYVQMPNVDPVQEMVNMISASRSYQANVETLNTAKTLMLKTL-TIGS 141



 Score = 42.2 bits (97), Expect = 0.071,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 34/105 (32%), Gaps = 7/105 (6%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDT-VG-----FRTIKVKFS-EVVGAIKNDIDQ 54
              F +  +A  A  QRL+  A N++N D+  G     ++  +V F+ + +G  +    Q
Sbjct: 5   MNIFGVAGSALSAQSQRLNVTASNLANADSATGPDGKPYKAKQVVFATDPLGGARTASGQ 64

Query: 55  KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
            +  V   K                      G        P   +
Sbjct: 65  GVGGVRVTKVMDDPSPMKSTYDPANPAADANGYVQMPNVDPVQEM 109


>gi|167630287|ref|YP_001680786.1| flagellar basal-body rod protein flgc, putative [Heliobacterium
           modesticaldum Ice1]
 gi|167593027|gb|ABZ84775.1| flagellar basal-body rod protein flgc, putative [Heliobacterium
           modesticaldum Ice1]
          Length = 159

 Score = 58.3 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 25/61 (40%)

Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
              I      D        G++   N N++ EM  MI  T+ + +  T I+  +   ++A
Sbjct: 94  FKMIYDPQHPDAIRTGPLTGYVRMPNVNTVTEMVDMISATRAYEANVTAINAAKSMAMKA 153

Query: 238 I 238
           +
Sbjct: 154 L 154



 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 6/31 (19%), Positives = 16/31 (51%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32
           +S +   +   A   R+  +++N++N +T 
Sbjct: 4  LSSIDTSASGLTAQRFRMDIISNNLANVNTT 34


>gi|78067839|ref|YP_370608.1| flagellar basal body rod protein FlgC [Burkholderia sp. 383]
 gi|77968584|gb|ABB09964.1| Flagellar basal-body rod protein FlgC [Burkholderia sp. 383]
          Length = 141

 Score = 58.3 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 24/47 (51%), Gaps = 1/47 (2%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           G+++  N + + EM  MI  ++ + +    ++  +  ML+ +  I S
Sbjct: 96  GYVQMPNVDPVQEMVNMISASRSYQANVETLNTAKTLMLKTL-TIGS 141



 Score = 41.8 bits (96), Expect = 0.096,   Method: Composition-based stats.
 Identities = 20/100 (20%), Positives = 40/100 (40%), Gaps = 9/100 (9%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDT-VG-----FRTIKVKFS-EVVGAIKNDIDQ 54
              F +  +A  A  QRL+  A N++N D+  G     ++  +V F+ + +G  +    Q
Sbjct: 5   MNIFGVAGSALSAQSQRLNVTASNLANADSATGPDGKPYKAKQVVFATDPIGGARTASGQ 64

Query: 55  KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES 94
            +  V   K           ST    + A + + +  + +
Sbjct: 65  GVGGVRVTKVMDD--PSPMKSTYDPSNPAADSNGYVQMPN 102


>gi|51246506|ref|YP_066390.1| flagellar basal body rod protein (FlgC) [Desulfotalea psychrophila
           LSv54]
 gi|50877543|emb|CAG37383.1| probable flagellar basal body rod protein (FlgC) [Desulfotalea
           psychrophila LSv54]
          Length = 143

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 25/46 (54%), Gaps = 1/46 (2%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G+++  N +++ EM  M+  T+ + +  T I   ++  L+A+  I 
Sbjct: 98  GYVDMPNVDTLKEMVDMMSATRSYQANVTAIQSAKRMALKAL-EIG 142



 Score = 48.3 bits (113), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 31/84 (36%), Gaps = 8/84 (9%)

Query: 1  MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDI 52
          M    SF I  +A  A   RL T++ N++N +T        ++   V F          +
Sbjct: 1  MDILNSFKISSSALKAQSIRLDTISSNIANAETTSTPEGGPYKKKSVYFQAKPLTFAEQL 60

Query: 53 DQKISFVASGKEYLSKEVGSFIST 76
          +  ++   +G E ++         
Sbjct: 61 NGSLNAKTTGVEVINIIEDKSEPR 84


>gi|188592115|ref|YP_001796713.1| flgc: flagellar basal-body rod protein [Cupriavidus taiwanensis LMG
           19424]
 gi|170938489|emb|CAP63476.1| FlgC: Flagellar basal-body rod protein [Cupriavidus taiwanensis LMG
           19424]
          Length = 122

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 16/96 (16%), Positives = 38/96 (39%)

Query: 144 EKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSN 203
             G+  +  +V+  M         G V+ +     P+ P         +   +G++   N
Sbjct: 24  PDGQAYRAKQVVFGMAPTPGQTDIGGVQVQGVSEDPSPPRMVHNPTHPMANAQGYVVMPN 83

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            N + EM  MI  ++ + +   +++  +  ML+ + 
Sbjct: 84  VNPVEEMVNMISASRSYQANVEVLNTAKNMMLKTLT 119


>gi|218674651|ref|ZP_03524320.1| flagellar hook protein FlgE [Rhizobium etli GR56]
          Length = 77

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 34/72 (47%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
          S    ++   A   RLSTV+DN++N +T G++ +   FS +V    +          S +
Sbjct: 6  SMKTAVSGMSAQANRLSTVSDNIANANTTGYKAVSTSFSSLVLPSSSGNYNSGGVQTSVR 65

Query: 64 EYLSKEVGSFIS 75
          + +S++     +
Sbjct: 66 QAISQQGDISYT 77


>gi|134297200|ref|YP_001120935.1| flagellar basal body rod protein FlgC [Burkholderia vietnamiensis
           G4]
 gi|134140357|gb|ABO56100.1| flagellar basal-body rod protein FlgC [Burkholderia vietnamiensis
           G4]
          Length = 141

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 22/43 (51%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G+++  N + + EM  MI  ++ + +    ++  +  ML+ + 
Sbjct: 96  GYVQMPNVDPVQEMVNMISASRSYQANVETLNTAKTLMLKTLT 138



 Score = 42.5 bits (98), Expect = 0.050,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 34/105 (32%), Gaps = 7/105 (6%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDT-VG-----FRTIKVKFS-EVVGAIKNDIDQ 54
              F +  +A  A  QRL+  A N++N D+  G     ++  +V F+ + +G  +    Q
Sbjct: 5   MNIFGVAGSALSAQSQRLNVTASNLANADSATGPDGKPYKAKQVVFATDPLGGARTASGQ 64

Query: 55  KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
            +  V   K                      G        P   +
Sbjct: 65  GVGGVRVTKVVDDPSPMKSTYDPANPAADANGYVQMPNVDPVQEM 109


>gi|149203129|ref|ZP_01880100.1| flagellar basal-body rod protein FlgC [Roseovarius sp. TM1035]
 gi|149143675|gb|EDM31711.1| flagellar basal-body rod protein FlgC [Roseovarius sp. TM1035]
          Length = 130

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 28/78 (35%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
           + ++  +   A  QRL  V++N++N DT G+R   V F              +S V   
Sbjct: 6  NALSVSASGLKAQAQRLQHVSENIANADTPGYRRKTVSFEATHAGTGTAGAVTVSRVHLD 65

Query: 63 KEYLSKEVGSFISTGTEL 80
          +    +          E 
Sbjct: 66 QSAPQRIYDPSHPLADET 83



 Score = 36.8 bits (83), Expect = 2.5,   Method: Composition-based stats.
 Identities = 15/106 (14%), Positives = 29/106 (27%), Gaps = 3/106 (2%)

Query: 128 SVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE 187
                    + I N    G   +     AT        +    R      +P     P  
Sbjct: 18  QAQRLQHVSENIANADTPGYRRKTVSFEATHAGTGTAGAVTVSRVHLDQSAPQRIYDPSH 77

Query: 188 DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
            L+  T   G  + S  + M E+       + + +   + D+  + 
Sbjct: 78  PLADET---GHYQGSTVDLMIEIADAREAQRSYEANLKMFDQVRQM 120


>gi|116694217|ref|YP_728428.1| flagellar basal body rod protein [Ralstonia eutropha H16]
 gi|113528716|emb|CAJ95063.1| flagellar basal body rod protein [Ralstonia eutropha H16]
          Length = 135

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 16/96 (16%), Positives = 37/96 (38%)

Query: 144 EKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSN 203
             G+  +  +V+  M         G V+       P+ P         +   +G++   N
Sbjct: 37  PDGQAYRAKQVVFGMAPTPGQTDIGGVQVRGVSEDPSPPRMVHNPTHPMANAQGYVVMPN 96

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            N + EM  MI  ++ + +   +++  +  ML+ + 
Sbjct: 97  VNPVEEMVNMISASRSYQANVEVLNTAKNMMLKTLT 132



 Score = 38.3 bits (87), Expect = 0.86,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 37/109 (33%), Gaps = 7/109 (6%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQ- 54
              F++  +A  A  QR++  A N++N D+V       +R  +V F       + DI   
Sbjct: 4   MNIFDVAGSAMAAQSQRMNVTASNLANADSVVSPDGQAYRAKQVVFGMAPTPGQTDIGGV 63

Query: 55  KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103
           ++  V+                     + +  +     E    I  +R 
Sbjct: 64  QVRGVSEDPSPPRMVHNPTHPMANAQGYVVMPNVNPVEEMVNMISASRS 112


>gi|254994393|ref|ZP_05276583.1| flagellar hook protein FlgE [Listeria monocytogenes FSL J2-064]
          Length = 62

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 18/54 (33%)

Query: 188 DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
                 +    LE SN +   E   ++     F   T +I   +  M + +  I
Sbjct: 8   QNGAGGISGSSLEGSNVDLSREFVNLMTYQSGFQGNTKVIRVADDVMKQIVNLI 61


>gi|85706171|ref|ZP_01037266.1| flagellar basal-body rod protein FlgC [Roseovarius sp. 217]
 gi|85669335|gb|EAQ24201.1| flagellar basal-body rod protein FlgC [Roseovarius sp. 217]
          Length = 130

 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 31/78 (39%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
           + ++  +   A  QRL  V++N++N DT G+R   V F       +     ++S V   
Sbjct: 6  NALSVSASGLKAQAQRLVHVSENIANADTPGYRRKTVSFETAFAGSEGTGAVEVSRVNLD 65

Query: 63 KEYLSKEVGSFISTGTEL 80
          +  L K          E 
Sbjct: 66 RRELQKIYDPSHPLADET 83



 Score = 36.8 bits (83), Expect = 2.7,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 14/37 (37%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           G  + S  + M E+       + + +   + D+  + 
Sbjct: 84  GHYQGSTVDLMIEIADAREAQRSYEANLKMFDQVRQM 120


>gi|125972984|ref|YP_001036894.1| flagellar basal-body rod protein FlgC [Clostridium thermocellum
           ATCC 27405]
 gi|256004781|ref|ZP_05429756.1| flagellar basal-body rod protein FlgC [Clostridium thermocellum DSM
           2360]
 gi|281417195|ref|ZP_06248215.1| flagellar basal-body rod protein FlgC [Clostridium thermocellum
           JW20]
 gi|125713209|gb|ABN51701.1| flagellar basal-body rod protein FlgC [Clostridium thermocellum
           ATCC 27405]
 gi|255991231|gb|EEU01338.1| flagellar basal-body rod protein FlgC [Clostridium thermocellum DSM
           2360]
 gi|281408597|gb|EFB38855.1| flagellar basal-body rod protein FlgC [Clostridium thermocellum
           JW20]
 gi|316940780|gb|ADU74814.1| flagellar basal-body rod protein FlgC [Clostridium thermocellum DSM
           1313]
          Length = 147

 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 23/46 (50%), Gaps = 1/46 (2%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G++   N + + EM  MI  T+ + +  T I+  +   ++A+  I 
Sbjct: 102 GYVLMPNVDVITEMVNMISATRAYEANITAINTTKGLAMKAL-EIG 146



 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 6/46 (13%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43
          S +I  +A  A   R+ T++ N++N +T     G  +R   V F E
Sbjct: 6  SLDISASALTAQRLRMDTISQNIANANTTRTENGQPYRRKTVLFEE 51


>gi|326791545|ref|YP_004309366.1| flagellar basal-body rod protein FlgC [Clostridium lentocellum DSM
           5427]
 gi|326542309|gb|ADZ84168.1| flagellar basal-body rod protein FlgC [Clostridium lentocellum DSM
           5427]
          Length = 145

 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 23/44 (52%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            +G++E  N N++ EM  MI  ++ + +  T  +  +    +A+
Sbjct: 98  AQGYVEMPNVNTVDEMVNMISASRSYEANVTSFNTMKSMFAKAL 141



 Score = 48.3 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 6/47 (12%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44
          S +I  +   A   RL  ++ NM+N +T     G  ++   V F ++
Sbjct: 6  SMDIAASGLTAQRLRLDIISQNMANVNTTRTAEGGPYKRKTVIFEQM 52


>gi|227112519|ref|ZP_03826175.1| flagellar basal body rod protein FlgC [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
 gi|227328336|ref|ZP_03832360.1| flagellar basal body rod protein FlgC [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 134

 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 7/44 (15%), Positives = 22/44 (50%)

Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +G++   N + + EM   I  ++ + +   +++  +  ML+ + 
Sbjct: 88  QGYVRMPNVDPVAEMVNTISASRSYQANVEVLNTTKSMMLKTLT 131



 Score = 37.2 bits (84), Expect = 1.9,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 6/47 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42
             F I  +A  A  QRL+  A N++N     G     +R  +V F 
Sbjct: 4  LNIFEISGSALSAQSQRLNVSASNLANADSVTGPDGEPYRAKQVVFE 50


>gi|188586015|ref|YP_001917560.1| flagellar basal-body rod protein FlgC [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|179350702|gb|ACB84972.1| flagellar basal-body rod protein FlgC [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 146

 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 19/42 (45%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G+++  N   + EM  MI  ++ + +  T ID  +      +
Sbjct: 101 GYVQKPNVEIVKEMTDMITASRAYEANATAIDNAKSMASNTL 142



 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 22/49 (44%), Gaps = 6/49 (12%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43
          M  +F+I  +   A   R+  +++N++N +T     G  +R     F  
Sbjct: 1  MFDTFDISGSGLTAERLRMDVISNNIANANTTRTEDGEPYRRQMPVFET 49


>gi|253688974|ref|YP_003018164.1| flagellar basal-body rod protein FlgC [Pectobacterium carotovorum
           subsp. carotovorum PC1]
 gi|251755552|gb|ACT13628.1| flagellar basal-body rod protein FlgC [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 134

 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 7/44 (15%), Positives = 22/44 (50%)

Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +G++   N + + EM   I  ++ + +   +++  +  ML+ + 
Sbjct: 88  QGYVRMPNVDPVAEMVNTISASRSYQANVEVLNTTKSMMLKTLT 131



 Score = 37.2 bits (84), Expect = 2.0,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 6/47 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42
             F I  +A  A  QRL+  A N++N     G     +R  +V F 
Sbjct: 4  LNIFEISGSALSAQSQRLNVSASNLANADSVTGPDGEPYRAKQVVFE 50


>gi|297617136|ref|YP_003702295.1| flagellar basal-body rod protein FlgC [Syntrophothermus lipocalidus
           DSM 12680]
 gi|297144973|gb|ADI01730.1| flagellar basal-body rod protein FlgC [Syntrophothermus lipocalidus
           DSM 12680]
          Length = 145

 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 23/44 (52%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           + G++   N N + EM  MI  T+ + +  + ++  +   ++A+
Sbjct: 98  QDGYVNMPNVNVVSEMVDMISATRAYEANVSAVEATKSMAMKAL 141



 Score = 55.6 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 22/48 (45%), Gaps = 6/48 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43
            +F+I  +   A   R+  +++N++N +T     G  +R   V F  
Sbjct: 4  LNAFDISASGMTAQRLRMDVISNNLANVNTTRTPQGGPYRRQMVIFEA 51


>gi|325295411|ref|YP_004281925.1| flagellar basal-body rod protein FlgC [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325065859|gb|ADY73866.1| flagellar basal-body rod protein FlgC [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 135

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 24/47 (51%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           G+++  N + + EM  MI   + + +  T  + ++  +L AI  + +
Sbjct: 89  GYVKLPNVDPIREMVDMISAMRTYEANLTAFNTHKGMLLNAIDILKA 135



 Score = 43.3 bits (100), Expect = 0.028,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 19/57 (33%), Gaps = 6/57 (10%)

Query: 1  MQ-TSFNIGLAAQLALEQRLSTVADNMSNTDTV---G--FRTIKVKFSEVVGAIKND 51
          M      + L        R+   + N++N ++V   G  +R     F  V+      
Sbjct: 1  MIFKGLEVSLTGMEVQRVRIDIHSSNLANANSVDENGNPYRRKIPIFESVLEKTAKG 57


>gi|292492369|ref|YP_003527808.1| flagellar hook-associated protein FlgK [Nitrosococcus halophilus
          Nc4]
 gi|291580964|gb|ADE15421.1| flagellar hook-associated protein FlgK [Nitrosococcus halophilus
          Nc4]
          Length = 647

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 32/79 (40%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
           +IGL+  LA+++ L+T + N++N +T GF   + + S  +               +   
Sbjct: 7  LSIGLSGLLAMQRSLATTSHNIANVNTPGFSRQRTELSASLPESTAKGFIGTGVNVATVR 66

Query: 65 YLSKEVGSFISTGTELDFA 83
                 +    G   ++A
Sbjct: 67 RAYDAFLTEQVQGYTSEYA 85



 Score = 40.6 bits (93), Expect = 0.20,   Method: Composition-based stats.
 Identities = 6/41 (14%), Positives = 13/41 (31%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E   ++   Q F +   +I   +      +  + 
Sbjct: 606 SGVNLEEEAANLLRFQQAFQAAARVISVADDMFQSLLGAVG 646


>gi|323163702|gb|EFZ49522.1| flagellar basal-body rod protein flgF domain protein [Escherichia
           coli E128010]
          Length = 75

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 27/67 (40%)

Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
           S  S       L+    + V  G LE SN N++  M  MI   ++F     +I   + + 
Sbjct: 6   SAESQATRGPILQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNA 65

Query: 235 LEAIRNI 241
             A + +
Sbjct: 66  GRANQLL 72


>gi|53717912|ref|YP_106898.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei
           K96243]
 gi|53724563|ref|YP_104796.1| flagellar basal body rod protein FlgC [Burkholderia mallei ATCC
           23344]
 gi|76809289|ref|YP_331878.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei
           1710b]
 gi|121599639|ref|YP_994289.1| flagellar basal body rod protein FlgC [Burkholderia mallei SAVP1]
 gi|124385719|ref|YP_001028062.1| flagellar basal body rod protein FlgC [Burkholderia mallei NCTC
           10229]
 gi|126439110|ref|YP_001057320.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei
           668]
 gi|126450357|ref|YP_001082869.1| flagellar basal body rod protein FlgC [Burkholderia mallei NCTC
           10247]
 gi|126454889|ref|YP_001064562.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei
           1106a]
 gi|134283634|ref|ZP_01770333.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           305]
 gi|167001534|ref|ZP_02267329.1| flagellar basal-body rod protein FlgC [Burkholderia mallei PRL-20]
 gi|167717658|ref|ZP_02400894.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei
           DM98]
 gi|167736701|ref|ZP_02409475.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei
           14]
 gi|167813799|ref|ZP_02445479.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei
           91]
 gi|167822316|ref|ZP_02453787.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei 9]
 gi|167843906|ref|ZP_02469414.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei
           B7210]
 gi|167892408|ref|ZP_02479810.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei
           7894]
 gi|167900906|ref|ZP_02488111.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei
           NCTC 13177]
 gi|167909125|ref|ZP_02496216.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei
           112]
 gi|167917162|ref|ZP_02504253.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei
           BCC215]
 gi|217424916|ref|ZP_03456412.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           576]
 gi|226199800|ref|ZP_03795351.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           Pakistan 9]
 gi|237810459|ref|YP_002894910.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           MSHR346]
 gi|238562527|ref|ZP_00440313.2| flagellar basal-body rod protein FlgC [Burkholderia mallei GB8
           horse 4]
 gi|242316173|ref|ZP_04815189.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           1106b]
 gi|254174790|ref|ZP_04881451.1| flagellar basal-body rod protein FlgC [Burkholderia mallei ATCC
           10399]
 gi|254182142|ref|ZP_04888739.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           1655]
 gi|254188072|ref|ZP_04894584.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           Pasteur 52237]
 gi|254197006|ref|ZP_04903430.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           S13]
 gi|254201894|ref|ZP_04908258.1| flagellar basal-body rod protein FlgC [Burkholderia mallei FMH]
 gi|254207228|ref|ZP_04913579.1| flagellar basal-body rod protein FlgC [Burkholderia mallei JHU]
 gi|254258642|ref|ZP_04949696.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           1710a]
 gi|254295812|ref|ZP_04963269.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           406e]
 gi|254359730|ref|ZP_04976001.1| flagellar basal-body rod protein FlgC [Burkholderia mallei
           2002721280]
 gi|42766726|gb|AAS45446.1| putative flagellar biosynthesis protein [Burkholderia pseudomallei]
 gi|52208326|emb|CAH34259.1| flagellar basal-body rod protein [Burkholderia pseudomallei K96243]
 gi|52427986|gb|AAU48579.1| flagellar basal-body rod protein FlgC [Burkholderia mallei ATCC
           23344]
 gi|76578742|gb|ABA48217.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           1710b]
 gi|121228449|gb|ABM50967.1| flagellar basal-body rod protein FlgC [Burkholderia mallei SAVP1]
 gi|124293739|gb|ABN03008.1| flagellar basal-body rod protein FlgC [Burkholderia mallei NCTC
           10229]
 gi|126218603|gb|ABN82109.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           668]
 gi|126228531|gb|ABN92071.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           1106a]
 gi|126243227|gb|ABO06320.1| flagellar basal-body rod protein FlgC [Burkholderia mallei NCTC
           10247]
 gi|134245043|gb|EBA45138.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           305]
 gi|147747788|gb|EDK54864.1| flagellar basal-body rod protein FlgC [Burkholderia mallei FMH]
 gi|147752770|gb|EDK59836.1| flagellar basal-body rod protein FlgC [Burkholderia mallei JHU]
 gi|148028944|gb|EDK86876.1| flagellar basal-body rod protein FlgC [Burkholderia mallei
           2002721280]
 gi|157805705|gb|EDO82875.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           406e]
 gi|157935752|gb|EDO91422.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           Pasteur 52237]
 gi|160695835|gb|EDP85805.1| flagellar basal-body rod protein FlgC [Burkholderia mallei ATCC
           10399]
 gi|169653749|gb|EDS86442.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           S13]
 gi|184212680|gb|EDU09723.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           1655]
 gi|217391936|gb|EEC31962.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           576]
 gi|225928151|gb|EEH24187.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           Pakistan 9]
 gi|237504017|gb|ACQ96335.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           MSHR346]
 gi|238522487|gb|EEP85931.1| flagellar basal-body rod protein FlgC [Burkholderia mallei GB8
           horse 4]
 gi|242139412|gb|EES25814.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           1106b]
 gi|243062736|gb|EES44922.1| flagellar basal-body rod protein FlgC [Burkholderia mallei PRL-20]
 gi|254217331|gb|EET06715.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           1710a]
          Length = 141

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 25/49 (51%), Gaps = 1/49 (2%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           + G++   N + + EM  MI  ++ + +    ++  ++ ML+ +  I S
Sbjct: 94  QNGYVTMPNVDPVQEMVNMISASRSYQANVETLNTAKQLMLKTL-TIGS 141



 Score = 43.3 bits (100), Expect = 0.027,   Method: Composition-based stats.
 Identities = 13/99 (13%), Positives = 34/99 (34%), Gaps = 7/99 (7%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSEVVGAIKNDIDQK 55
              F++  +A  A  QRL+  A N++N     G     ++  +V F+            +
Sbjct: 5   MNIFDVAGSAMSAQSQRLNVTASNLANADSVTGPDGKPYKAKQVVFATAPMGRARTASGQ 64

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES 94
                   + +  +     +     + A + + +  + +
Sbjct: 65  GVGGVQVSKVID-DPSPMKTAYDPSNPAADQNGYVTMPN 102


>gi|115353120|ref|YP_774959.1| flagellar basal body rod protein FlgC [Burkholderia ambifaria AMMD]
 gi|170703094|ref|ZP_02893914.1| flagellar basal-body rod protein FlgC [Burkholderia ambifaria
           IOP40-10]
 gi|171321836|ref|ZP_02910737.1| flagellar basal-body rod protein FlgC [Burkholderia ambifaria
           MEX-5]
 gi|172061974|ref|YP_001809626.1| flagellar basal body rod protein FlgC [Burkholderia ambifaria
           MC40-6]
 gi|115283108|gb|ABI88625.1| flagellar basal-body rod protein FlgC [Burkholderia ambifaria AMMD]
 gi|170131991|gb|EDT00499.1| flagellar basal-body rod protein FlgC [Burkholderia ambifaria
           IOP40-10]
 gi|171092874|gb|EDT38126.1| flagellar basal-body rod protein FlgC [Burkholderia ambifaria
           MEX-5]
 gi|171994491|gb|ACB65410.1| flagellar basal-body rod protein FlgC [Burkholderia ambifaria
           MC40-6]
          Length = 141

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 24/47 (51%), Gaps = 1/47 (2%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           G+++  N + + EM  MI  ++ + +    ++  +  ML+ +  I S
Sbjct: 96  GYVQMPNVDPVQEMVNMISASRSYQANVETLNTAKTLMLKTL-TIGS 141



 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 34/105 (32%), Gaps = 7/105 (6%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDT-VG-----FRTIKVKFS-EVVGAIKNDIDQ 54
              F +  +A  A  QRL+  A N++N D+  G     ++  +V F+ + +G  +    Q
Sbjct: 5   MNIFGVAGSALSAQSQRLNVTASNLANADSATGPDGKPYKAKQVVFATDPMGGARTASGQ 64

Query: 55  KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
            +  V   K                      G        P   +
Sbjct: 65  GVGGVRVTKVMDDPSPMKSTYDPANPSADANGYVQMPNVDPVQEM 109


>gi|154250382|ref|YP_001411207.1| flagellar basal-body rod protein FlgC [Fervidobacterium nodosum
           Rt17-B1]
 gi|154154318|gb|ABS61550.1| flagellar basal-body rod protein FlgC [Fervidobacterium nodosum
           Rt17-B1]
          Length = 138

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 23/43 (53%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G+++  N N + EM  MI+  + + +  T I+  +  +  A++
Sbjct: 93  GYVKLPNVNIVREMVDMINAQRAYEANATAINTTKAMINAALQ 135



 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 34/85 (40%), Gaps = 6/85 (7%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDIDQKI 56
             NI      A   R+  ++ N++N++T     G  +R     F EV+  IK + +   
Sbjct: 6  NIMNISATGLSAQRFRIEVISTNIANSETTRTENGGPYRRKVPVFQEVLRNIKGNQENGG 65

Query: 57 SFVASGKEYLSKEVGSFISTGTELD 81
            V S  E  S+    +  T  + D
Sbjct: 66 VMVKSIYEDPSEYRIVYDPTHPDAD 90


>gi|107023955|ref|YP_622282.1| flagellar basal body rod protein FlgC [Burkholderia cenocepacia AU
           1054]
 gi|116691042|ref|YP_836665.1| flagellar basal body rod protein FlgC [Burkholderia cenocepacia
           HI2424]
 gi|170734376|ref|YP_001766323.1| flagellar basal body rod protein FlgC [Burkholderia cenocepacia
           MC0-3]
 gi|206558966|ref|YP_002229726.1| flagellar basal body rod protein FlgC [Burkholderia cenocepacia
           J2315]
 gi|105894144|gb|ABF77309.1| flagellar basal-body rod protein FlgC [Burkholderia cenocepacia AU
           1054]
 gi|116649131|gb|ABK09772.1| flagellar basal-body rod protein FlgC [Burkholderia cenocepacia
           HI2424]
 gi|169817618|gb|ACA92201.1| flagellar basal-body rod protein FlgC [Burkholderia cenocepacia
           MC0-3]
 gi|198035003|emb|CAR50875.1| flagellar basal-body rod protein FlgC (putative proximal rod
           protein) [Burkholderia cenocepacia J2315]
          Length = 141

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 24/47 (51%), Gaps = 1/47 (2%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           G+++  N + + EM  MI  ++ + +    ++  +  ML+ +  I S
Sbjct: 96  GYVQMPNVDPVQEMVNMISASRSYQANVETLNTAKTLMLKTL-TIGS 141



 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 34/105 (32%), Gaps = 7/105 (6%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDT-VG-----FRTIKVKFS-EVVGAIKNDIDQ 54
              F +  +A  A  QRL+  A N++N D+  G     ++  +V F+ + +G  +    Q
Sbjct: 5   MNIFGVAGSALSAQSQRLNVTASNLANADSATGPDGKPYKAKQVVFATDPMGGARTASGQ 64

Query: 55  KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
            +  V   K                      G        P   +
Sbjct: 65  GVGGVRVTKVMDDPSPMKSTYDPANPAADANGYVQMPNVDPVQEM 109


>gi|302392398|ref|YP_003828218.1| flagellar basal-body rod protein FlgC [Acetohalobium arabaticum DSM
           5501]
 gi|302204475|gb|ADL13153.1| flagellar basal-body rod protein FlgC [Acetohalobium arabaticum DSM
           5501]
          Length = 145

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/136 (13%), Positives = 39/136 (28%), Gaps = 9/136 (6%)

Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171
           G  VS+SG         +              + G   +K  V          +     +
Sbjct: 6   GMNVSSSGMTAQRLRMDLISNNIANINTTRTDDGGPYKKKSPVFKAKNDQGFSLPNSDAQ 65

Query: 172 RENSGISPNIPPTPLEDLSGVTVKR---------GFLEDSNANSMYEMGQMIHLTQKFNS 222
               G    +            V           G++E  N +   EM  M+  ++ + +
Sbjct: 66  SNQVGQGVEVSSIKESSKPPKLVYNPQHPDANEEGYVEMPNIDIASEMVDMVSASRAYEA 125

Query: 223 ITTLIDENEKSMLEAI 238
             T ++ +++    A+
Sbjct: 126 NVTALNTSKQMAKSAL 141



 Score = 49.9 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 8/47 (17%), Positives = 20/47 (42%), Gaps = 6/47 (12%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43
          +  N+  +   A   R+  +++N++N +T     G  ++     F  
Sbjct: 5  SGMNVSSSGMTAQRLRMDLISNNIANINTTRTDDGGPYKKKSPVFKA 51


>gi|83310488|ref|YP_420752.1| flagellar hook protein FlgE [Magnetospirillum magneticum AMB-1]
 gi|82945329|dbj|BAE50193.1| Flagellar hook protein FlgE [Magnetospirillum magneticum AMB-1]
          Length = 545

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/223 (12%), Positives = 67/223 (30%), Gaps = 29/223 (13%)

Query: 1   MQTSFNIGLA-AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ----- 54
           M        + A   ++  + +++ N++N +T G++  +  F  V+              
Sbjct: 1   MLFGAFTNASQAMQTMDWAMGSISQNIANVNTTGYKEKETLFKTVLSETHTSPPTSQNSP 60

Query: 55  ---------KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR--------- 96
                     I  V +    +  + G+  ++ T  D A+ G  +F +  P          
Sbjct: 61  TKNTATTGLDIFGVRAVDRTMVSKSGTITASTTWSDMAINGRGFFIVTPPDSTGAPQTTL 120

Query: 97  ---GIILTRDGRFKVTDD--GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQK 151
                + TR G F        +  + +    ++  A+  + +  K         G+ S  
Sbjct: 121 SSSNTLYTRAGDFTQRAVNGNNYFTTADGNFLMGWAADNLGVVSKTLSPVYANLGQKSDG 180

Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTV 194
               +   + +V  +        +                +T+
Sbjct: 181 MATTSIQLVANVPSNATMTGATKTFTDTTSVTDGFGTAQDLTM 223



 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/142 (13%), Positives = 39/142 (27%)

Query: 96  RGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI 155
               LT+         G  V     Y    M  V I             +     +  V 
Sbjct: 399 DMRKLTQFSGETNNKLGVKVIDQNGYASGTMDKVEISTDGSVMAHYDNGESRRIFQIPVA 458

Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIH 215
           + +    +D   G + R           +  +  SG ++     E SN     +  +MI 
Sbjct: 459 SFVAPDQLDAISGTLFRATEQAGDMTVASISDQGSGASIVASATESSNVALEDQFTRMIV 518

Query: 216 LTQKFNSITTLIDENEKSMLEA 237
             + ++  + +    ++     
Sbjct: 519 TQKAYSVNSNVFKTADEMTQTI 540


>gi|167835109|ref|ZP_02461992.1| flagellar basal body rod protein FlgC [Burkholderia thailandensis
           MSMB43]
          Length = 141

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 25/49 (51%), Gaps = 1/49 (2%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           + G++   N + + EM  MI  ++ + +    ++  ++ ML+ +  I S
Sbjct: 94  QNGYVTMPNVDPVQEMVNMISASRSYQANVETLNTAKQLMLKTL-TIGS 141



 Score = 43.3 bits (100), Expect = 0.026,   Method: Composition-based stats.
 Identities = 14/99 (14%), Positives = 35/99 (35%), Gaps = 7/99 (7%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSEVVGAIKNDIDQK 55
              F++  +A  A  QRL+  A N++N     G     ++  +V F+            +
Sbjct: 5   MNIFDVAGSAMSAQSQRLNVTASNLANADSVTGPDGKPYKAKQVVFATAPMGRARTASGQ 64

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES 94
                   + +  +     +T    + A + + +  + +
Sbjct: 65  GVGGVQVTKVVD-DPSPMKTTYDPSNPAADQNGYVTMPN 102


>gi|83720057|ref|YP_440799.1| flagellar basal body rod protein FlgC [Burkholderia thailandensis
           E264]
 gi|167579486|ref|ZP_02372360.1| flagellar basal body rod protein FlgC [Burkholderia thailandensis
           TXDOH]
 gi|167617583|ref|ZP_02386214.1| flagellar basal body rod protein FlgC [Burkholderia thailandensis
           Bt4]
 gi|257140550|ref|ZP_05588812.1| flagellar basal body rod protein FlgC [Burkholderia thailandensis
           E264]
 gi|83653882|gb|ABC37945.1| flagellar basal-body rod protein FlgC [Burkholderia thailandensis
           E264]
          Length = 141

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 25/49 (51%), Gaps = 1/49 (2%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           + G++   N + + EM  MI  ++ + +    ++  ++ ML+ +  I S
Sbjct: 94  QNGYVTMPNVDPVQEMVNMISASRSYQANVETLNTAKQLMLKTL-TIGS 141



 Score = 43.3 bits (100), Expect = 0.028,   Method: Composition-based stats.
 Identities = 14/99 (14%), Positives = 35/99 (35%), Gaps = 7/99 (7%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSEVVGAIKNDIDQK 55
              F++  +A  A  QRL+  A N++N     G     ++  +V F+            +
Sbjct: 5   MNIFDVAGSAMSAQSQRLNVTASNLANADSVTGPDGKPYKAKQVVFATAPMGGARTASGQ 64

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES 94
                   + +  +     +T    + A + + +  + +
Sbjct: 65  GVGGVQVTKVID-DPSPMKTTYDPSNPAADQNGYVTMPN 102


>gi|145297460|ref|YP_001140301.1| lateral flagellar hook-associated protein [Aeromonas salmonicida
          subsp. salmonicida A449]
 gi|142850232|gb|ABO88553.1| lateral flagellar hook-associated protein [Aeromonas salmonicida
          subsp. salmonicida A449]
          Length = 439

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 30/61 (49%), Gaps = 2/61 (3%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV--VGAIKNDIDQKISFV 59
           +  NIGL+   A +  L+  A N++N +T+G+   +     +   G + N +  +++ V
Sbjct: 1  MSMLNIGLSGLNAAQIALNVTAQNIANVNTIGYSRQEAMMGSLSGFGRLDNGMGVEVTGV 60

Query: 60 A 60
           
Sbjct: 61 R 61



 Score = 39.1 bits (89), Expect = 0.57,   Method: Composition-based stats.
 Identities = 5/38 (13%), Positives = 17/38 (44%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           S  N+  E  +++  T+ + +   +I  +++     + 
Sbjct: 400 SGVNTDEEGVKIMAYTKAYQANAKVISTSDQLFNSILN 437


>gi|121607563|ref|YP_995370.1| flagellar basal-body rod protein FlgC [Verminephrobacter eiseniae
           EF01-2]
 gi|121552203|gb|ABM56352.1| flagellar basal-body rod protein FlgC [Verminephrobacter eiseniae
           EF01-2]
          Length = 134

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 25/45 (55%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +G++  SN N++ EM  MI   + + +   +++  +  +L+ ++
Sbjct: 87  AQGYVTHSNVNAVQEMVDMISAARSYQNNVEVMNTAKSLLLKTLQ 131



 Score = 42.5 bits (98), Expect = 0.049,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 32/81 (39%), Gaps = 6/81 (7%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQ 54
          M + FN+  +A  A  QRL+ VA N++N D V       ++  +V F        +    
Sbjct: 3  MLSIFNLSGSAISAQAQRLNVVASNLANVDAVAGPDGQPYKARQVVFQTAPMGAPSAAGV 62

Query: 55 KISFVASGKEYLSKEVGSFIS 75
          ++  ++  +    +       
Sbjct: 63 RVIAISESQVPGRRVHDPGHP 83


>gi|50120637|ref|YP_049804.1| flagellar basal body rod protein FlgC [Pectobacterium atrosepticum
           SCRI1043]
 gi|49611163|emb|CAG74609.1| flagellar basal-body rod protein [Pectobacterium atrosepticum
           SCRI1043]
          Length = 134

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 7/44 (15%), Positives = 22/44 (50%)

Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +G++   N + + EM   I  ++ + +   +++  +  ML+ + 
Sbjct: 88  QGYVRMPNVDPVAEMVNTISASRSYQANVEVLNTTKSMMLKTLT 131



 Score = 37.2 bits (84), Expect = 2.3,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 6/47 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42
             F I  +A  A  QRL+  A N++N     G     +R  +V F 
Sbjct: 4  LNIFEISGSALSAQSQRLNVSASNLANADSVTGPDGQPYRAKQVVFE 50


>gi|330818587|ref|YP_004362292.1| flagellar basal-body rod protein FlgC [Burkholderia gladioli BSR3]
 gi|327370980|gb|AEA62336.1| flagellar basal-body rod protein FlgC [Burkholderia gladioli BSR3]
          Length = 141

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 24/47 (51%), Gaps = 1/47 (2%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           G++   N + + EM  MI  ++ + +    ++  ++ ML+ +  I S
Sbjct: 96  GYVTMPNVDPVQEMVNMISASRSYQANVETLNTAKQLMLKTL-TIGS 141



 Score = 39.9 bits (91), Expect = 0.29,   Method: Composition-based stats.
 Identities = 14/99 (14%), Positives = 33/99 (33%), Gaps = 7/99 (7%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSEVVGAIKNDIDQK 55
              F++  +A  A  QRL+  A N++N     G     +R  +V F             +
Sbjct: 5   MNIFDVAGSAMSAESQRLNVTASNLANADSVTGPDGKPYRAKQVVFETQPVGNARTRSGQ 64

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES 94
                   + +  +     +     + A + + +  + +
Sbjct: 65  GVG-GVQVKQVIDDPSPMKTNYDPSNPAADANGYVTMPN 102


>gi|169831914|ref|YP_001717896.1| flagellar basal-body rod protein FlgB [Candidatus Desulforudis
          audaxviator MP104C]
 gi|169638758|gb|ACA60264.1| flagellar basal-body rod protein FlgB [Candidatus Desulforudis
          audaxviator MP104C]
          Length = 132

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 20/42 (47%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          A      R   +A N++N +T GF+  +V F   + A  +D 
Sbjct: 14 ALDGQAVRQRVIAHNIANLNTPGFKRSRVDFQAFMQAALDDS 55


>gi|150021011|ref|YP_001306365.1| flagellar basal-body rod protein FlgC [Thermosipho melanesiensis
           BI429]
 gi|149793532|gb|ABR30980.1| flagellar basal-body rod protein FlgC [Thermosipho melanesiensis
           BI429]
          Length = 137

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 22/43 (51%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G+++  N N + EM  MI+  + + +  T  +  +  +  A++
Sbjct: 92  GYVKLPNVNVVREMVDMINAQRAYEANVTAFNTTKAMINSALQ 134



 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 31/85 (36%), Gaps = 6/85 (7%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDIDQKI 56
              I      A   R+  + +N++N++T     G  +R     F E++  ++  ++   
Sbjct: 5  NIMTIAATGMSAQRLRIDVITNNLANSETTRTEKGEPYRRKVPVFQELLRNVRGRLENGG 64

Query: 57 SFVASGKEYLSKEVGSFISTGTELD 81
            V    E  S     +  T  + D
Sbjct: 65 VVVKEIYEDQSPFRVVYDPTHPDAD 89


>gi|147678426|ref|YP_001212641.1| flagellar basal body rod protein [Pelotomaculum thermopropionicum
          SI]
 gi|146274523|dbj|BAF60272.1| flagellar basal body rod protein [Pelotomaculum thermopropionicum
          SI]
          Length = 147

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 32/82 (39%), Gaps = 9/82 (10%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVG---------FRTIKVKFSEVVGAIKNDIDQ 54
          SF I  +   A   RL  +++N++N +T G         +R     F++V+  +++    
Sbjct: 6  SFAISASGLTAERLRLDLISNNIANMNTAGRPDDPAVPAYRRRFPVFAQVLQEVRSAGTA 65

Query: 55 KISFVASGKEYLSKEVGSFIST 76
          +  +  +G   +          
Sbjct: 66 RPRYKGAGVRVIRIVEDHSPPR 87



 Score = 56.4 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 1/46 (2%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G++   N N + EM  MI  T+ + +  T ++  +   L+AI  I 
Sbjct: 101 GYVAYPNINIVNEMINMITATRSYEANVTALNAAKDIALKAI-EIG 145


>gi|118581824|ref|YP_903074.1| flagellar basal-body rod protein FlgC [Pelobacter propionicus DSM
           2379]
 gi|118504534|gb|ABL01017.1| flagellar basal-body rod protein FlgC [Pelobacter propionicus DSM
           2379]
          Length = 145

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 22/43 (51%)

Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           +G++   N N + EM  MI  ++ + +  T +   +   L+A+
Sbjct: 99  QGYVAMPNVNVIEEMADMIGASRTYEANVTAVQTAKSMALKAL 141



 Score = 42.2 bits (97), Expect = 0.058,   Method: Composition-based stats.
 Identities = 9/51 (17%), Positives = 23/51 (45%), Gaps = 8/51 (15%)

Query: 1  MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43
          M   ++ N+  +A  A   R++ ++ N++N +      G  ++     F+ 
Sbjct: 1  MDFFSAMNVSASALSAERTRMNLISSNLANANATRTPEGGPYKRKDAVFAA 51


>gi|261821151|ref|YP_003259257.1| flagellar basal body rod protein FlgC [Pectobacterium wasabiae
           WPP163]
 gi|261605164|gb|ACX87650.1| flagellar basal-body rod protein FlgC [Pectobacterium wasabiae
           WPP163]
          Length = 134

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 6/44 (13%), Positives = 22/44 (50%)

Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +G++   N + + EM   I  ++ + +   +++  +  M++ + 
Sbjct: 88  QGYVRMPNVDPVAEMVNTISASRSYQANVEVLNTTKSMMMKTLT 131



 Score = 36.8 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 6/47 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42
             F I  +A  A  QRL+  A N++N     G     +R  +V F 
Sbjct: 4  LNIFEISGSALSAQSQRLNVSASNLANADSVTGPDGEPYRAKQVVFE 50


>gi|307546970|ref|YP_003899449.1| flagellar basal body rod protein FlgC [Halomonas elongata DSM 2581]
 gi|307218994|emb|CBV44264.1| flagellar basal body rod protein FlgC [Halomonas elongata DSM 2581]
          Length = 135

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 25/44 (56%)

Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +G+++  N +   EM  MI  ++ + +   ++D N++ +L+ + 
Sbjct: 88  QGYVDMPNVDPAAEMVNMISASRSYQANVEVMDTNKQLLLKTLS 131



 Score = 42.2 bits (97), Expect = 0.064,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 30/81 (37%), Gaps = 6/81 (7%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQ 54
          M + F I  +A  A  QR++  A N++N D+V       +R  +V F     +       
Sbjct: 3  MFSVFEISGSAMSAQSQRMNVTASNLANADSVAGPDGEAYRAKQVLFETRAQSRTGVGGV 62

Query: 55 KISFVASGKEYLSKEVGSFIS 75
           +  V      + ++      
Sbjct: 63 GVREVIEDPSPMRRQYRPEHP 83


>gi|167630286|ref|YP_001680785.1| flagellar basal-body rod protein flgb, putative [Heliobacterium
          modesticaldum Ice1]
 gi|167593026|gb|ABZ84774.1| flagellar basal-body rod protein flgb, putative [Heliobacterium
          modesticaldum Ice1]
          Length = 137

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 28/57 (49%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLS 67
             A   R   +ADN++N DT G++  +V+F + + A+ +     ++   S   ++ 
Sbjct: 16 GLDAASTRHQVIADNLANVDTPGYKRKEVQFEDELAAVIDREASGMTGKRSDPRHIP 72


>gi|89092134|ref|ZP_01165089.1| flagellar basal-body rod protein FlgC [Oceanospirillum sp. MED92]
 gi|89083869|gb|EAR63086.1| flagellar basal-body rod protein FlgC [Oceanospirillum sp. MED92]
          Length = 145

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 24/44 (54%)

Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +GF+   N N + EM  MI  ++ F   T +++  ++ + + IR
Sbjct: 98  QGFVYYPNVNVVEEMADMISASRSFQINTEIMNTAKQMLQQTIR 141


>gi|224825170|ref|ZP_03698276.1| flagellar hook-associated protein FlgK [Lutiella nitroferrum 2002]
 gi|224602841|gb|EEG09018.1| flagellar hook-associated protein FlgK [Lutiella nitroferrum 2002]
          Length = 598

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 55/183 (30%), Gaps = 4/183 (2%)

Query: 1   MQTSFN-IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN-DIDQKISF 58
           M TS   IG++   A +  L+  + N+SN +T G+     + +       +     +   
Sbjct: 1   MGTSIFSIGVSGLNAAQGALTVTSHNISNVNTAGYTRQVTQQAARYPQSASYGFIGQGVD 60

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK--VTDDGSLVS 116
           +          +   + +    D    G   F  +    +  +  G         GSL +
Sbjct: 61  LTHVNRVYDDYLTQQVQSAQATDSYYSGQLDFLKQVDSLMADSTVGVSPSLQDFFGSLQT 120

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
            S     +      I   Q          G++ +    ++T    SVD   G   +    
Sbjct: 121 LSSDPSAIPSRQTAINNAQALATKFRTLDGQLQEMASGVSTRIKASVDTINGLASQIADL 180

Query: 177 ISP 179
              
Sbjct: 181 NQR 183



 Score = 39.5 bits (90), Expect = 0.41,   Method: Composition-based stats.
 Identities = 6/38 (15%), Positives = 15/38 (39%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           S  N   E   +I   Q + + + +I   ++     ++
Sbjct: 559 SGVNLDEEAANLIKYQQAYQASSKVIQIAQQLFSSLLQ 596


>gi|188586014|ref|YP_001917559.1| flagellar basal-body rod protein FlgB [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|179350701|gb|ACB84971.1| flagellar basal-body rod protein FlgB [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 134

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/98 (15%), Positives = 37/98 (37%), Gaps = 3/98 (3%)

Query: 10  AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSK- 68
            +     +R   +++N++N +T GF+  +V F E +        + I    + ++++   
Sbjct: 12  NSLNGTTKRHEVISNNIANVNTPGFKRGRVDFEEQLKEAMKADSKDIEGKITREKHIPIG 71

Query: 69  --EVGSFISTGTELDFALEGDAWFALESPRGIILTRDG 104
             +         E D ++  D            LT++ 
Sbjct: 72  KVDSTIEPQVRRESDSSMRNDDNNVDVDTEMSRLTQNS 109


>gi|92114100|ref|YP_574028.1| flagellar basal-body rod protein FlgC [Chromohalobacter salexigens
           DSM 3043]
 gi|91797190|gb|ABE59329.1| flagellar basal-body rod protein FlgC [Chromohalobacter salexigens
           DSM 3043]
          Length = 135

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 22/43 (51%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N + + EM  MI  ++ + +   +++ ++  M + + 
Sbjct: 89  GYVAMPNVDPVDEMVDMIAASRSYQANVEVMNTSKSLMQQTLS 131


>gi|317129211|ref|YP_004095493.1| flagellar basal-body rod protein FlgC [Bacillus cellulosilyticus
           DSM 2522]
 gi|315474159|gb|ADU30762.1| flagellar basal-body rod protein FlgC [Bacillus cellulosilyticus
           DSM 2522]
          Length = 148

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 26/46 (56%), Gaps = 1/46 (2%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G++E  N + + EM  ++  T+ + +  T +D ++  +L+A+  I 
Sbjct: 103 GYVELPNVDPLKEMIDLMSATRSYEANVTTLDAHKNMLLKAL-EIG 147



 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/29 (34%), Positives = 14/29 (48%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTV 32
            N   +A  A   R+  V+ NM+N DT 
Sbjct: 6  GINTSASALTAQRLRMDVVSSNMANADTT 34


>gi|330447910|ref|ZP_08311558.1| flagellar hook-associated protein FlgK [Photobacterium leiognathi
          subsp. mandapamensis svers.1.1.]
 gi|328492101|dbj|GAA06055.1| flagellar hook-associated protein FlgK [Photobacterium leiognathi
          subsp. mandapamensis svers.1.1.]
          Length = 455

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 26/72 (36%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
              NIGL+   A +  L   A N++N +TVG+   +   S + G         +   + 
Sbjct: 1  MNMINIGLSGLNANKTALDVTAHNVANVNTVGYSRQQAMMSALAGRELFSAGSGVEVDSI 60

Query: 62 GKEYLSKEVGSF 73
           +      V   
Sbjct: 61 RRVSDQFIVKQM 72



 Score = 36.4 bits (82), Expect = 3.5,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 15/40 (37%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           S  NS  E   ++  T  + +   +I    +     +R +
Sbjct: 416 SAVNSDEEAANLMTFTNAYQANMKVISTANELFDSVLRLL 455


>gi|138894738|ref|YP_001125191.1| flagellar basal body rod protein FlgC [Geobacillus
           thermodenitrificans NG80-2]
 gi|196247641|ref|ZP_03146343.1| flagellar basal-body rod protein FlgC [Geobacillus sp. G11MC16]
 gi|134266251|gb|ABO66446.1| Flagellar basal-body rod protein [Geobacillus thermodenitrificans
           NG80-2]
 gi|196212425|gb|EDY07182.1| flagellar basal-body rod protein FlgC [Geobacillus sp. G11MC16]
          Length = 150

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 35/116 (30%), Gaps = 17/116 (14%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV------G----FRTIKVK-------FSE 43
           M  S NI  +A  A   R+  ++ N++N DT       G    +R   V        FS 
Sbjct: 3   MFQSLNISASALTAQRLRMDVISSNIANVDTTRARLVNGEWEPYRRKVVVVEPRGEQFSS 62

Query: 44  VVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
            + A     D   S V   +          +      D   +G        P   +
Sbjct: 63  YLQAALGRTDAVGSGVRVREIVDDPAPFKLLYDPDHPDAGDDGYVRLPNVDPLKEM 118



 Score = 56.8 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 25/46 (54%), Gaps = 1/46 (2%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G++   N + + EM  +I  T+ + +  T ++ ++  +++A+  I 
Sbjct: 105 GYVRLPNVDPLKEMVDLIGATRSYEANVTALNASKGMLMKAL-EIG 149


>gi|332669180|ref|YP_004452188.1| flagellar hook-associated protein FlgK [Cellulomonas fimi ATCC
          484]
 gi|332338218|gb|AEE44801.1| flagellar hook-associated protein FlgK [Cellulomonas fimi ATCC
          484]
          Length = 480

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/88 (17%), Positives = 29/88 (32%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
          +     L++ +A  Q L     N++N +TVG+   +   S +  A    +         G
Sbjct: 5  SGLGTALSSLIAQRQALDVAGQNVANANTVGYTRQRASMSALPAAQVPSMFSVNHGAGEG 64

Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWF 90
                E    +     L     G ++ 
Sbjct: 65 VRVTGIERLGDVFLDMRLRTQTGGASYL 92



 Score = 48.3 bits (113), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 6/55 (10%), Positives = 22/55 (40%)

Query: 188 DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           + + VT ++  L  ++ ++  E   M+   + +     ++   ++ +   I    
Sbjct: 422 ESARVTAQQQQLAATSVDTDEETVNMLAFQRAYEGAARVLTAVDEMLDTLINRTG 476


>gi|284041507|ref|YP_003391847.1| flagellar basal-body rod protein FlgC [Conexibacter woesei DSM
           14684]
 gi|283945728|gb|ADB48472.1| flagellar basal-body rod protein FlgC [Conexibacter woesei DSM
           14684]
          Length = 149

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 7/46 (15%), Positives = 21/46 (45%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G++   N N + EM  +I  ++ + +  T +   ++   + +  + 
Sbjct: 104 GYVAMPNVNPVTEMVDLISSSRSYEANVTAMQSAKQMFTKTLELLR 149



 Score = 40.6 bits (93), Expect = 0.18,   Method: Composition-based stats.
 Identities = 7/29 (24%), Positives = 14/29 (48%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTV 32
          + +I  +   A   R+   A+N++N  T 
Sbjct: 6  AIDIAGSGLTAERLRMDVTAENLANAQTT 34


>gi|291278935|ref|YP_003495770.1| flagellar basal-body rod protein FlgC [Deferribacter desulfuricans
           SSM1]
 gi|290753637|dbj|BAI80014.1| flagellar basal-body rod protein FlgC [Deferribacter desulfuricans
           SSM1]
          Length = 134

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 25/46 (54%), Gaps = 1/46 (2%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G++   N N + EM  M+  ++ + +  T+++  ++  L+A+  I 
Sbjct: 88  GYVAYPNINPIEEMVNMLEASRSYEANVTVLNTAKQLALKAL-EIG 132



 Score = 53.7 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/101 (13%), Positives = 28/101 (27%), Gaps = 6/101 (5%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDIDQKISF 58
             I      A   R++ ++ N++N +T     G  ++  +V F  ++        +    
Sbjct: 7   LKIASTGLSAQRIRINVISSNLANANTTRTEDGTPYQKREVIFRTILDGELRGGVRVEKV 66

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
           V   K  + K          E   A                
Sbjct: 67  VRDEKPPILKYEPGHPDANEEGYVAYPNINPIEEMVNMLEA 107


>gi|94500239|ref|ZP_01306772.1| flagellar basal-body rod protein FlgC [Oceanobacter sp. RED65]
 gi|94427538|gb|EAT12515.1| flagellar basal-body rod protein FlgC [Oceanobacter sp. RED65]
          Length = 148

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 6/43 (13%), Positives = 19/43 (44%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N + EM  M+  ++ +     ++   ++ +   + 
Sbjct: 103 GYVMYPNVNIVEEMTDMMSSSRSYQMNVEMMKTAKQMLQRTLT 145



 Score = 40.6 bits (93), Expect = 0.20,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 6/48 (12%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEV 44
            FN+      A   RL+T A N++N +TV       +R  K  F  +
Sbjct: 5  NVFNVAGTGMNAQSVRLNTTASNIANAETVSSSIDETYRARKPWFQAL 52


>gi|94266975|ref|ZP_01290624.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|93452330|gb|EAT02961.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
          Length = 118

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 34/83 (40%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M +     L+   AL+Q+ S  A N++N +T G++ +KV  +E       +   +     
Sbjct: 1  MVSGIQAALSGLQALQQKNSATAHNVANVNTDGYKKVKVSLAETTPPGGVEARAEKIDTP 60

Query: 61 SGKEYLSKEVGSFISTGTELDFA 83
            +       G  +   + +D A
Sbjct: 61 GPQVSEQTADGPELVEKSNVDLA 83



 Score = 56.4 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 18/41 (43%)

Query: 199 LEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +E SN +   EM  M+   + F +   ++   ++ +   + 
Sbjct: 75  VEKSNVDLAEEMPNMMLSRRYFQANLKVVQTEDERLGNLLN 115


>gi|309388815|gb|ADO76695.1| flagellar basal-body rod protein FlgC [Halanaerobium praevalens DSM
           2228]
          Length = 143

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 20/43 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++E  N + M EM  MI  ++ + + T  I   +     A+ 
Sbjct: 98  GYVELPNVSVMTEMVNMIDASRAYEANTQAISNYKSMANSALN 140



 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 16/32 (50%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32
          M    +I  +   A   R+ T++ N++N +T 
Sbjct: 1  MFKGIDISASGLTAQRLRMDTISSNIANAETT 32


>gi|289523576|ref|ZP_06440430.1| flagellar basal-body rod protein FlgC [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
 gi|289503268|gb|EFD24432.1| flagellar basal-body rod protein FlgC [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
          Length = 136

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 23/47 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           G++   N N + EM  M+  T+ + +   +++  ++    AI  + S
Sbjct: 90  GYVAYPNVNVVREMTDMMAATRAYEANLMVVESAKEIWGSAIDVLRS 136



 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/106 (14%), Positives = 33/106 (31%), Gaps = 7/106 (6%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDI-DQKI 56
           S  I  ++  A    +  ++ N++N +T     G  +R     F+E + A +      ++
Sbjct: 6   SLEIAGSSLTAHRLWMDLISQNLANVNTTRTQDGGPYRRKVPIFAERLEAAEKGAKGVRV 65

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTR 102
             +                   E  +    +     E    +  TR
Sbjct: 66  EKIEEDDLPPRMVYQPEHPDADEEGYVAYPNVNVVREMTDMMAATR 111


>gi|261419417|ref|YP_003253099.1| flagellar basal body rod protein FlgC [Geobacillus sp. Y412MC61]
 gi|319766232|ref|YP_004131733.1| flagellar basal-body rod protein FlgC [Geobacillus sp. Y412MC52]
 gi|261375874|gb|ACX78617.1| flagellar basal-body rod protein FlgC [Geobacillus sp. Y412MC61]
 gi|317111098|gb|ADU93590.1| flagellar basal-body rod protein FlgC [Geobacillus sp. Y412MC52]
          Length = 150

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/114 (15%), Positives = 40/114 (35%), Gaps = 3/114 (2%)

Query: 129 VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED 188
           V  +         + E    S  G + A +G          VR      +P         
Sbjct: 39  VNGEWEPYRRKMVIIEPQSGSFSGYLQAALGRADAVDGGVQVREIVDDPAPFKLVYDPNH 98

Query: 189 LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
                   G++   N + + EM  +I  T+ + +  T+++ ++  +++A+  I 
Sbjct: 99  PDAG--ADGYVRLPNVDPLKEMVDLIGATRSYEANVTVLNASKGMLMKAL-EIG 149



 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 33/114 (28%), Gaps = 17/114 (14%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTV------G----FRTIKV-------KFSEVV 45
            S NI  +A  A   R+  +A N++N DT       G    +R   V        FS  +
Sbjct: 5   QSLNISASALTAQRLRMDVIASNIANVDTTRARLVNGEWEPYRRKMVIIEPQSGSFSGYL 64

Query: 46  GAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
            A     D     V   +          +      D   +G        P   +
Sbjct: 65  QAALGRADAVDGGVQVREIVDDPAPFKLVYDPNHPDAGADGYVRLPNVDPLKEM 118


>gi|168334478|ref|ZP_02692649.1| Flagellar basal body rod protein [Epulopiscium sp. 'N.t. morphotype
           B']
          Length = 153

 Score = 56.8 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 21/42 (50%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++E  N + + EM  MI  ++ + +  T  +  +    +A+
Sbjct: 108 GYVEMPNVDVVTEMVNMISASRSYEANVTAFNNLKSMNTKAL 149



 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 11/85 (12%), Positives = 24/85 (28%), Gaps = 6/85 (7%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDIDQKI 56
          +  +I      A   RL  +  N++N ++     G  ++   V F  +      +     
Sbjct: 5  SGMDIAATGLTAQRFRLDVITQNLANINSTRTPDGGPYQRRTVLFESIPMRDAANKLPDN 64

Query: 57 SFVASGKEYLSKEVGSFISTGTELD 81
                +            +G   D
Sbjct: 65 FHNILNRNLNMYHTSGVQVSGIVED 89


>gi|78224306|ref|YP_386053.1| flagellar basal-body rod protein FlgC [Geobacter metallireducens
           GS-15]
 gi|78195561|gb|ABB33328.1| Flagellar basal-body rod protein FlgC [Geobacter metallireducens
           GS-15]
          Length = 147

 Score = 56.8 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 23/49 (46%), Gaps = 1/49 (2%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
            +G++   N N + EM  MI  T+ + +  T +   +   L+ +  + S
Sbjct: 99  AQGYVALPNVNVVEEMADMIAATRAYEANVTAVQAAKGMALKTL-ELGS 146



 Score = 41.0 bits (94), Expect = 0.15,   Method: Composition-based stats.
 Identities = 10/55 (18%), Positives = 24/55 (43%), Gaps = 8/55 (14%)

Query: 1  MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGA 47
          M   ++  I  +A  A   R++ ++ N++N ++     G  ++     F+    A
Sbjct: 1  MDFFSAMQISSSALSAERTRMNLISSNIANANSTRTAEGGPYKRKDAVFAATPAA 55


>gi|56419752|ref|YP_147070.1| flagellar basal body rod protein FlgC [Geobacillus kaustophilus
           HTA426]
 gi|56379594|dbj|BAD75502.1| flagellar basal-body rod protein [Geobacillus kaustophilus HTA426]
          Length = 150

 Score = 56.8 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 26/46 (56%), Gaps = 1/46 (2%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G++   N + + EM  +I  T+ + +  T+++ ++  +++A+  I 
Sbjct: 105 GYVRLPNVDPLKEMVDLIGATRSYEANVTVLNASKGMLMKAL-EIG 149



 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 33/114 (28%), Gaps = 17/114 (14%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTV------G----FRTIKV-------KFSEVV 45
            S NI  +A  A   R+  +A N++N DT       G    +R   V        FS  +
Sbjct: 5   QSLNISASALTAQRLRMDVIASNIANVDTTRARLVNGEWEPYRRKMVIIEPRSGSFSGYL 64

Query: 46  GAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
            A     D     V   +          +      D   +G        P   +
Sbjct: 65  QAALGRADAVDGGVRVREIVDDPAPFKLVYDPNHPDAGADGYVRLPNVDPLKEM 118


>gi|119384843|ref|YP_915899.1| flagellar basal body rod protein FlgC [Paracoccus denitrificans
          PD1222]
 gi|119374610|gb|ABL70203.1| flagellar basal body rod protein [Paracoccus denitrificans
          PD1222]
          Length = 130

 Score = 56.8 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 3/48 (6%)

Query: 1  MQTSFNI---GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV 45
          M  S +     ++   +   RL  +++N++N DT G+R   V F E V
Sbjct: 1  MTNSLSATELAVSGMKSQAVRLRHISENIANADTPGYRRKLVAFREQV 48



 Score = 40.2 bits (92), Expect = 0.24,   Method: Composition-based stats.
 Identities = 13/113 (11%), Positives = 36/113 (31%), Gaps = 3/113 (2%)

Query: 131 IQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS 190
             +  +    N+        + K++A           G V            P   +   
Sbjct: 18  QAVRLRHISENIANADTPGYRRKLVAFREQVDFGRPTGAVTPGPPRFDRRELPRIHDPAH 77

Query: 191 GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS---MLEAIRN 240
            +  + G+   SN + + E+       + + +   + +++ +    +L+ IR 
Sbjct: 78  PMADEEGYYSGSNVDLIIEIADAKEAGRSYEANLRVFEQSRQMGSSLLDLIRR 130


>gi|83646783|ref|YP_435218.1| flagellar basal-body rod protein FlgC [Hahella chejuensis KCTC
           2396]
 gi|83634826|gb|ABC30793.1| flagellar basal-body rod protein FlgC [Hahella chejuensis KCTC
           2396]
          Length = 133

 Score = 56.8 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 24/47 (51%), Gaps = 1/47 (2%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           G++E    N + EM  M+  T+ + +  +++   +   L+A+  I S
Sbjct: 88  GYVEMPAINPVDEMTSMMLATRAYEANVSVLSAAKTMALKAL-EIGS 133


>gi|217077497|ref|YP_002335215.1| flagellar basal-body rod protein FlgC [Thermosipho africanus
           TCF52B]
 gi|217037352|gb|ACJ75874.1| flagellar basal-body rod protein FlgC [Thermosipho africanus
           TCF52B]
          Length = 137

 Score = 56.8 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 22/43 (51%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G+++  N N + EM  MI+  + + +  T  +  +  +  A++
Sbjct: 92  GYVKLPNVNVVREMVDMINAQRAYEANVTAFNTTKAMINSALQ 134



 Score = 51.8 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 31/85 (36%), Gaps = 6/85 (7%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDIDQKI 56
              I      A   R+  +++N++N++T     G  +R     F E++  I   ++   
Sbjct: 5  NIMTISATGMSAQRLRIDVISNNLANSETTRTENGEPYRRKVPVFQELLRNINGRLENGG 64

Query: 57 SFVASGKEYLSKEVGSFISTGTELD 81
            V    E  S     +  T  + D
Sbjct: 65 VVVKKIYEDKSPFRIVYDPTHPDAD 89


>gi|225181613|ref|ZP_03735054.1| flagellar basal-body rod protein FlgC [Dethiobacter alkaliphilus
           AHT 1]
 gi|225167721|gb|EEG76531.1| flagellar basal-body rod protein FlgC [Dethiobacter alkaliphilus
           AHT 1]
          Length = 136

 Score = 56.8 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 23/42 (54%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N N + EM  MI  T+ + +  T ++ ++   L+A+
Sbjct: 90  GYVAYPNVNIVQEMVDMITATRAYEANVTALNASKNMFLKAL 131



 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 38/107 (35%), Gaps = 7/107 (6%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVV-GAIKNDIDQK 55
            + N+  +   A   RL  +A+N++N  T     G  ++     F+EV+ GA K+    +
Sbjct: 5   KAMNVSSSGLTAERFRLDLIANNIANAHTTRTEDGGPYQRKSAVFAEVMDGARKSGQGVR 64

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTR 102
           +  V+                  E  +    +     E    I  TR
Sbjct: 65  VQGVSVDNTEPRLVYEPEHPDANEEGYVAYPNVNIVQEMVDMITATR 111


>gi|163856433|ref|YP_001630731.1| flagellar basal body rod protein FlgC [Bordetella petrii DSM 12804]
 gi|163260161|emb|CAP42463.1| flagellar basal-body rod protein FlgC [Bordetella petrii]
          Length = 139

 Score = 56.8 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 6/44 (13%), Positives = 23/44 (52%)

Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +G++   N + + E   MI  ++ + +   +++  ++ M++ + 
Sbjct: 92  QGYVTMPNVDPVAETVNMIAASRSYQANVEVLNTAKQLMMKTLT 135



 Score = 37.2 bits (84), Expect = 2.3,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 6/46 (13%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDT-VG-----FRTIKVKFS 42
          + F+I  +A  A  QR++  A N++N D+ VG     +R  +V F 
Sbjct: 5  SIFDIAGSALQAQSQRMNVSASNLANADSAVGPDGQPYRARQVVFQ 50


>gi|253573516|ref|ZP_04850859.1| flagellar basal-body rod protein FlgC [Paenibacillus sp. oral taxon
           786 str. D14]
 gi|251847044|gb|EES75049.1| flagellar basal-body rod protein FlgC [Paenibacillus sp. oral taxon
           786 str. D14]
          Length = 149

 Score = 56.8 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 23/43 (53%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N + + EM  MI  T+ + +  T ++ ++    +A++
Sbjct: 104 GYVYMPNVDILKEMVDMISATRSYEANVTALNASKAMFTKALQ 146



 Score = 42.5 bits (98), Expect = 0.044,   Method: Composition-based stats.
 Identities = 9/29 (31%), Positives = 16/29 (55%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTV 32
          SF I  +A  A   R+  ++ N++N +T 
Sbjct: 6  SFGISSSALTAQRLRMDVISSNIANAETT 34


>gi|33596138|ref|NP_883781.1| flagellar basal body rod protein FlgC [Bordetella parapertussis
           12822]
 gi|33601539|ref|NP_889099.1| flagellar basal body rod protein FlgC [Bordetella bronchiseptica
           RB50]
 gi|33573141|emb|CAE36788.1| flagellar basal-body rod protein FlgC [Bordetella parapertussis]
 gi|33575975|emb|CAE33054.1| flagellar basal-body rod protein FlgC [Bordetella bronchiseptica
           RB50]
          Length = 139

 Score = 56.8 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 18/136 (13%), Positives = 43/136 (31%), Gaps = 12/136 (8%)

Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
                      VSAS       +A    Q  +  ++            G+ I  + +  V
Sbjct: 12  SALSAQSQRMNVSASNMANADSVAGPDGQPYRARQVVFQVNPPPGQAFGQEIGGVRVAGV 71

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223
              Q   ++      P                +G++   N + + E   MI  ++ + + 
Sbjct: 72  VEDQSPFKKIYDPKHPMAD------------AQGYVNMPNVDPVAETVNMIAASRSYQAN 119

Query: 224 TTLIDENEKSMLEAIR 239
             +++  ++ ML+ + 
Sbjct: 120 VEVLNTAKQLMLKTLT 135



 Score = 37.5 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 6/42 (14%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFS 42
          I  +A  A  QR++  A NM+N D+V       +R  +V F 
Sbjct: 9  IAGSALSAQSQRMNVSASNMANADSVAGPDGQPYRARQVVFQ 50


>gi|220929470|ref|YP_002506379.1| flagellar basal-body rod protein FlgC [Clostridium cellulolyticum
           H10]
 gi|219999798|gb|ACL76399.1| flagellar basal-body rod protein FlgC [Clostridium cellulolyticum
           H10]
          Length = 147

 Score = 56.8 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 22/42 (52%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N + + EM  MI  T+ + +  T ++  +   L+A+
Sbjct: 102 GYVNMPNVDIVTEMVNMISATRSYEANVTSVNATKSMALKAL 143



 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 23/47 (48%), Gaps = 6/47 (12%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43
          ++ +I  +   A   R+ T++ N++N +T     G  +R   V F E
Sbjct: 5  SALDISASGLTAQRVRMDTISQNIANANTTRTTDGTPYRRRDVVFEE 51


>gi|39995516|ref|NP_951467.1| flagellar basal-body rod protein FlgC [Geobacter sulfurreducens
           PCA]
 gi|39982279|gb|AAR33740.1| flagellar basal-body rod protein FlgC [Geobacter sulfurreducens
           PCA]
 gi|298504516|gb|ADI83239.1| flagellar basal body rod protein FlgC [Geobacter sulfurreducens
           KN400]
          Length = 146

 Score = 56.8 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 1/47 (2%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           G++   N N + EM  MI  T+ + +  T +   +   L+ +  I S
Sbjct: 100 GYVALPNVNVVEEMADMIAATRAYEANVTAMQAAKNMALKTL-EIGS 145



 Score = 40.6 bits (93), Expect = 0.18,   Method: Composition-based stats.
 Identities = 19/136 (13%), Positives = 41/136 (30%), Gaps = 21/136 (15%)

Query: 1   MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFS---------- 42
           M   ++  +  +A  A   R++ ++ N++N ++     G  ++     F+          
Sbjct: 1   MDFFSAMQVSSSALSAERTRMNLISANLANANSTRTAEGGPYKRKDAVFAATQVGEGFRS 60

Query: 43  --EVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL 100
             + +        Q    V        +   S      +   AL  +     E    I  
Sbjct: 61  ALDRMRKNAPQGVQVTGIVEDPNPPRLQYDPSHPDADAKGYVALP-NVNVVEEMADMIAA 119

Query: 101 TRDGRFKVTDDGSLVS 116
           TR     VT   +  +
Sbjct: 120 TRAYEANVTAMQAAKN 135


>gi|260222465|emb|CBA32056.1| Flagellar basal-body rod protein flgC [Curvibacter putative
           symbiont of Hydra magnipapillata]
          Length = 134

 Score = 56.8 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 24/43 (55%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++  SN N + EM  MI  ++ + +   +++  +  +L+ ++
Sbjct: 89  GYVTQSNVNPVEEMVNMISASRSYQNNVEVMNTAKSLLLKTLQ 131



 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 6/82 (7%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQ 54
          M + FN+  +A  A  QRL+ VA N++N D V      G+++ +V F  V    +     
Sbjct: 3  MFSIFNVSGSAVSAQSQRLNVVASNLANADAVAGPDGQGYKSRQVVFETVPMGSEASSGV 62

Query: 55 KISFVASGKEYLSKEVGSFIST 76
          K+S +    E L K       +
Sbjct: 63 KVSSIKESNEPLRKVHNPLHPS 84


>gi|166009026|ref|ZP_02229924.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
          Antiqua str. E1979001]
 gi|167419248|ref|ZP_02311001.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
          Orientalis str. MG05-1020]
 gi|167466339|ref|ZP_02331043.1| flagellar basal body rod protein FlgF [Yersinia pestis FV-1]
 gi|229840622|ref|ZP_04460781.1| Flagellar basal-body rod protein flgF [Yersinia pestis biovar
          Orientalis str. PEXU2]
 gi|229842827|ref|ZP_04462979.1| Flagellar basal-body rod protein flgF [Yersinia pestis biovar
          Orientalis str. India 195]
 gi|165992365|gb|EDR44666.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
          Antiqua str. E1979001]
 gi|166963242|gb|EDR59263.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar
          Orientalis str. MG05-1020]
 gi|229690094|gb|EEO82151.1| Flagellar basal-body rod protein flgF [Yersinia pestis biovar
          Orientalis str. India 195]
 gi|229696988|gb|EEO87035.1| Flagellar basal-body rod protein flgF [Yersinia pestis biovar
          Orientalis str. PEXU2]
          Length = 62

 Score = 56.8 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 16/37 (43%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTI 37
          M       ++       +    A+N++N++T GFR  
Sbjct: 1  MDKLLYTAVSGANRSLSQQQIHANNLANSNTQGFRAD 37


>gi|323705448|ref|ZP_08117023.1| flagellar basal-body rod protein FlgC [Thermoanaerobacterium
           xylanolyticum LX-11]
 gi|323535350|gb|EGB25126.1| flagellar basal-body rod protein FlgC [Thermoanaerobacterium
           xylanolyticum LX-11]
          Length = 149

 Score = 56.8 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 22/42 (52%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N N + EM  MI  T+ + +  T ++  +  + +A+
Sbjct: 103 GYVNYPNVNIVSEMVDMISATRAYEANVTAVNSTKSMIEKAL 144



 Score = 46.0 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 8/31 (25%), Positives = 14/31 (45%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32
            S +I      A   R+  ++ N++N DT 
Sbjct: 4  LNSIDISATGLTAERLRMDVISQNIANVDTT 34


>gi|146281769|ref|YP_001171922.1| flagellar basal body rod protein FlgC [Pseudomonas stutzeri A1501]
 gi|145569974|gb|ABP79080.1| flagellar basal-body rod protein FlgC [Pseudomonas stutzeri A1501]
          Length = 134

 Score = 56.8 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 15/111 (13%), Positives = 34/111 (30%), Gaps = 6/111 (5%)

Query: 129 VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED 188
              +           + G    +          +     G V  +    +   P  P  D
Sbjct: 27  QTYRARHPVFATVFQQAGGQPNESLFAGQDQAGAGVQVLGVVEDQGELQARYEPNHPAAD 86

Query: 189 LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
                 + G++   N N + EM  MI  ++ F +   L++  +  + + + 
Sbjct: 87  ------ESGYVYYPNVNVVEEMADMISASRAFQTNAELMNTAKTMLQKVLT 131



 Score = 40.6 bits (93), Expect = 0.19,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 26/73 (35%), Gaps = 6/73 (8%)

Query: 12 QLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65
            A   RL+T++ N++N +TV       +R     F+ V        ++ +         
Sbjct: 1  MSAQSTRLNTISSNIANAETVSSSVDQTYRARHPVFATVFQQAGGQPNESLFAGQDQAGA 60

Query: 66 LSKEVGSFISTGT 78
            + +G     G 
Sbjct: 61 GVQVLGVVEDQGE 73


>gi|297530608|ref|YP_003671883.1| flagellar basal-body rod protein FlgC [Geobacillus sp. C56-T3]
 gi|297253860|gb|ADI27306.1| flagellar basal-body rod protein FlgC [Geobacillus sp. C56-T3]
          Length = 150

 Score = 56.8 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 26/46 (56%), Gaps = 1/46 (2%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G++   N + + EM  +I  T+ + +  T+++ ++  +++A+  I 
Sbjct: 105 GYVRLPNVDPLKEMVDLIGATRSYEANVTVLNASKGMLMKAL-EIG 149



 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 33/114 (28%), Gaps = 17/114 (14%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTV------G----FRTIKV-------KFSEVV 45
            S NI  +A  A   R+  +A N++N DT       G    +R   V        FS  +
Sbjct: 5   QSLNISASALTAQRLRMDVIASNIANVDTTRARLVNGEWEPYRRKMVIIEPQSGSFSGYL 64

Query: 46  GAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
            A     D     V   +          +      D   +G        P   +
Sbjct: 65  QAALGRADAVDGGVRVREIVDDPAPFKLVYDPNHPDAGADGYVRLPNVDPLKEM 118


>gi|332531616|ref|ZP_08407513.1| flagellar basal-body rod protein FlgC [Hylemonella gracilis ATCC
           19624]
 gi|332038979|gb|EGI75408.1| flagellar basal-body rod protein FlgC [Hylemonella gracilis ATCC
           19624]
          Length = 136

 Score = 56.8 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 24/43 (55%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++  SN N + EM  MI  ++ + +   +++  +  +L+ ++
Sbjct: 91  GYVNQSNVNPVEEMVNMISASRSYQNNVEVMNTAKTLLLKTLQ 133



 Score = 40.2 bits (92), Expect = 0.24,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 29/82 (35%), Gaps = 6/82 (7%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQ 54
          M + F +  +A  A  QRL+ VA N++N D V       ++  +V F  +          
Sbjct: 3  MFSIFGVSGSAISAQAQRLNVVASNLANADAVAGPDGQFYKARQVVFETLPFDEATPGAA 62

Query: 55 KISFVASGKEYLSKEVGSFIST 76
           +   A  +           + 
Sbjct: 63 GVKINAVTESQAPARRTYEPTH 84


>gi|251789166|ref|YP_003003887.1| flagellar basal body rod protein FlgC [Dickeya zeae Ech1591]
 gi|271500064|ref|YP_003333089.1| flagellar basal-body rod protein FlgC [Dickeya dadantii Ech586]
 gi|307131611|ref|YP_003883627.1| flagellar basal-body rod protein flgC [Dickeya dadantii 3937]
 gi|247537787|gb|ACT06408.1| flagellar basal-body rod protein FlgC [Dickeya zeae Ech1591]
 gi|270343619|gb|ACZ76384.1| flagellar basal-body rod protein FlgC [Dickeya dadantii Ech586]
 gi|306529140|gb|ADM99070.1| Flagellar basal-body rod protein flgC [Dickeya dadantii 3937]
          Length = 134

 Score = 56.8 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N + + EM   I  ++ + +   +++  +  ML+ + 
Sbjct: 89  GYVRMPNVDPVNEMVNTISASRSYQANVEVLNTTKSMMLKTLT 131



 Score = 39.1 bits (89), Expect = 0.61,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 6/47 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42
             F+I  +A  A  QRL+  A N++N     G     +R  +V F 
Sbjct: 4  LNIFDISGSALSAQSQRLNVSASNLANADSVTGPDGQPYRAKQVVFE 50


>gi|304316910|ref|YP_003852055.1| flagellar basal-body rod protein FlgC [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778412|gb|ADL68971.1| flagellar basal-body rod protein FlgC [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 149

 Score = 56.4 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 22/42 (52%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N N + EM  MI  T+ + +  T ++  +  + +A+
Sbjct: 103 GYVNYPNVNIVSEMVDMISATRAYEANVTAVNSAKSMIEKAL 144



 Score = 45.6 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 8/31 (25%), Positives = 14/31 (45%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32
            S +I      A   R+  ++ N++N DT 
Sbjct: 4  LNSIDISATGLTAERLRMDVISQNIANVDTT 34


>gi|326204628|ref|ZP_08194484.1| flagellar basal-body rod protein FlgC [Clostridium papyrosolvens
           DSM 2782]
 gi|325985195|gb|EGD46035.1| flagellar basal-body rod protein FlgC [Clostridium papyrosolvens
           DSM 2782]
          Length = 147

 Score = 56.4 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 22/42 (52%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N + + EM  MI  T+ + +  T ++  +   L+A+
Sbjct: 102 GYVNMPNVDIVTEMVNMISATRSYEANVTSVNATKSMALKAL 143



 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 24/47 (51%), Gaps = 6/47 (12%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43
          ++ +I  +   A   R+ T++ N++N +T     G  +R  +V F E
Sbjct: 5  SALDISASGLTAQRVRMDTISQNIANANTTRTADGTPYRRREVVFEE 51


>gi|94266018|ref|ZP_01289739.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|94270422|ref|ZP_01291737.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|93450809|gb|EAT01850.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|93453413|gb|EAT03835.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
          Length = 118

 Score = 56.4 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 18/41 (43%)

Query: 199 LEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +E SN +   EM  M+   + F +   ++   ++ +   + 
Sbjct: 75  VEKSNVDLAEEMPNMMLSRRYFQANLKVVQTEDERLGNLLN 115



 Score = 55.3 bits (131), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 33/83 (39%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M       L+   AL+Q+ S  A N++N +T G++ +KV  +E       +   +     
Sbjct: 1  MVGGIQAALSGLQALQQKNSATAHNVANVNTDGYKKVKVSLAETTPPGGVEARAEKIDTP 60

Query: 61 SGKEYLSKEVGSFISTGTELDFA 83
            +       G  +   + +D A
Sbjct: 61 GPQVSEQTADGPELVEKSNVDLA 83


>gi|226939376|ref|YP_002794449.1| FlgC1 [Laribacter hongkongensis HLHK9]
 gi|226714302|gb|ACO73440.1| FlgC1 [Laribacter hongkongensis HLHK9]
          Length = 137

 Score = 56.4 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 22/43 (51%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N + EM  MI  ++ + +   +++  ++ + + + 
Sbjct: 91  GYVTMPNINPVEEMTDMISASRAYQTNVEMMNTTKQLLQKTLS 133



 Score = 40.6 bits (93), Expect = 0.19,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 34/81 (41%), Gaps = 6/81 (7%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTD----TVG--FRTIKVKFSEVVGAIKNDIDQK 55
              +I  +A  A  +RL+ VA N++N D    + G  ++  ++ F+ +  +       K
Sbjct: 4  NRVLDIAGSALTAQSKRLNVVASNIANVDSAVASNGEPYKARRIVFTPIPVSPAEPKVAK 63

Query: 56 ISFVASGKEYLSKEVGSFIST 76
          ++  A  ++     +    + 
Sbjct: 64 VAVTAIVEDQSPPRMNYNPAH 84


>gi|251797447|ref|YP_003012178.1| flagellar basal-body rod protein FlgC [Paenibacillus sp. JDR-2]
 gi|247545073|gb|ACT02092.1| flagellar basal-body rod protein FlgC [Paenibacillus sp. JDR-2]
          Length = 151

 Score = 56.4 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 21/42 (50%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N +   EM  MI  ++ + +  T ++ ++    +A+
Sbjct: 106 GYVHMPNVDVAKEMVDMISASRSYEANVTALNASKAMFTKAL 147



 Score = 36.4 bits (82), Expect = 3.4,   Method: Composition-based stats.
 Identities = 5/21 (23%), Positives = 11/21 (52%)

Query: 12 QLALEQRLSTVADNMSNTDTV 32
            A   R+  ++ N++N +T 
Sbjct: 14 LTAQRLRMDVISSNIANAETT 34


>gi|54307275|ref|YP_128295.1| flagellar hook-associated protein [Photobacterium profundum SS9]
 gi|46911695|emb|CAG18493.1| Hypothetical flagellar hook-associated protein [Photobacterium
          profundum SS9]
          Length = 468

 Score = 56.4 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 29/80 (36%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           +  NIGL+   A    LS  + N++N  T GF   +V F   V A        +S V  
Sbjct: 1  MSLINIGLSGLNAANAGLSVTSHNIANAMTPGFSRQRVGFGAQVSAGSQGAGVGVSSVER 60

Query: 62 GKEYLSKEVGSFISTGTELD 81
            +    +     +     +
Sbjct: 61 MADNYLNQQIYKQNGSWGFN 80



 Score = 35.6 bits (80), Expect = 6.7,   Method: Composition-based stats.
 Identities = 13/123 (10%), Positives = 33/123 (26%), Gaps = 3/123 (2%)

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178
           G+    +     I +       +  +      +   +A        ++ G+         
Sbjct: 342 GEPGNSENLQQLIDLKNAPVSIDQTKLSIEDAETYQVAIAKFEGKSLNNGYTGLTGDWAI 401

Query: 179 PNIPPTPLEDLSGVTVKRGFLED---SNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
                    + S   V +   E    S  N   E   ++  TQ + +   +I   ++   
Sbjct: 402 KTAQIEADTEASKALVGQAQGERDSISGVNLDEEAASIMTYTQMYQANAKVISTAQQLFD 461

Query: 236 EAI 238
             +
Sbjct: 462 VTL 464


>gi|33592477|ref|NP_880121.1| flagellar basal body rod protein FlgC [Bordetella pertussis Tohama
           I]
 gi|33572123|emb|CAE41665.1| flagellar basal-body rod protein FlgC [Bordetella pertussis Tohama
           I]
 gi|332381894|gb|AEE66741.1| flagellar basal body rod protein FlgC [Bordetella pertussis CS]
          Length = 139

 Score = 56.4 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 10/87 (11%), Positives = 31/87 (35%)

Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQ 212
             +      +     G VR        +      +    +   +G++   N + + E   
Sbjct: 49  FQVNPPAGQAFGQEIGGVRVAGVVEDQSPFKKIYDPKHPMADAQGYVNMPNVDPVAETVN 108

Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIR 239
           MI  ++ + +   +++  ++ ML+ + 
Sbjct: 109 MIAASRSYQANVEVLNTAKQLMLKTLT 135



 Score = 37.2 bits (84), Expect = 2.3,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 6/42 (14%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFS 42
          I  +A  A  QR++  A NM+N D+V       +R  +V F 
Sbjct: 9  IAGSALSAQSQRMNVSASNMANADSVAGPDGQPYRARQVVFQ 50


>gi|319649569|ref|ZP_08003725.1| flagellar basal-body rod protein C [Bacillus sp. 2_A_57_CT2]
 gi|317398731|gb|EFV79413.1| flagellar basal-body rod protein C [Bacillus sp. 2_A_57_CT2]
          Length = 150

 Score = 56.4 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 25/42 (59%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++E  N + + EM  +I  T+ + +  T+ + ++  M++A+
Sbjct: 105 GYVEMPNVDPLREMTDLISATRSYEANVTVFNASKGMMMKAL 146



 Score = 41.0 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 10/32 (31%), Positives = 16/32 (50%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32
          M  S N   +A  A   R+  ++ NM+N D+ 
Sbjct: 3  MFHSMNNTASALTAQRLRMDVISSNMANADST 34


>gi|302037602|ref|YP_003797924.1| flagellar basal-body rod protein FlgC [Candidatus Nitrospira
           defluvii]
 gi|300605666|emb|CBK41999.1| Flagellar basal-body rod protein FlgC [Candidatus Nitrospira
           defluvii]
          Length = 149

 Score = 56.4 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 1/46 (2%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           GF+   N N M EM  MI  ++ + +    I+        A+  I 
Sbjct: 104 GFVTMPNVNVMEEMVNMIGASRAYEANVQAINATRTMWNRAL-EIG 148



 Score = 42.9 bits (99), Expect = 0.038,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 6/46 (13%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNT-----DTVG-FRTIKVKFSE 43
          S  + ++A  A   RL+ +A N++N       T G +R   V F  
Sbjct: 6  SLAVSVSALDAHRHRLNVIASNLANAQSTKTSTGGPYRRRDVVFQA 51


>gi|239817167|ref|YP_002946077.1| flagellar basal-body rod protein FlgC [Variovorax paradoxus S110]
 gi|239803744|gb|ACS20811.1| flagellar basal-body rod protein FlgC [Variovorax paradoxus S110]
          Length = 138

 Score = 56.4 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 22/43 (51%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N + EM  MI  ++ + +   +++  +  M++ + 
Sbjct: 93  GYVAMPNVNVVEEMTNMISASRSYQANVEVLNTAKTLMVKTLS 135



 Score = 43.3 bits (100), Expect = 0.026,   Method: Composition-based stats.
 Identities = 19/121 (15%), Positives = 40/121 (33%), Gaps = 6/121 (4%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQK 55
              F++  +A  A  QR++  A N++N ++V       +R  +V F       ++    K
Sbjct: 8   MNIFSVAGSAMAAQSQRMNVTASNLANAESVAGPDGKPYRAKQVVFEVDASGQQDIGGVK 67

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115
           ++ V      L               +    +     E    I  +R  +  V    +  
Sbjct: 68  VAGVIEDPSPLKMVFDPKNPHADAKGYVAMPNVNVVEEMTNMISASRSYQANVEVLNTAK 127

Query: 116 S 116
           +
Sbjct: 128 T 128


>gi|149927796|ref|ZP_01916047.1| flagellar basal-body rod protein FlgC [Limnobacter sp. MED105]
 gi|149823418|gb|EDM82649.1| flagellar basal-body rod protein FlgC [Limnobacter sp. MED105]
          Length = 140

 Score = 56.4 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 24/43 (55%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N++ EM  M+  ++ + +   +++  ++ ML+ + 
Sbjct: 94  GYVYMPNVNAVEEMVDMLAASRSYQTNAEVMNTAKQLMLKTLN 136



 Score = 39.1 bits (89), Expect = 0.55,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 27/80 (33%), Gaps = 6/80 (7%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56
           SF +   A  A   RL+TVA N++N DT        ++  KV F  V+           
Sbjct: 5  NSFKLAGGAMQAQTTRLNTVASNLANVDTAAGDPNSVYQARKVVFEAVLQKAAPGKASLA 64

Query: 57 SFVASGKEYLSKEVGSFIST 76
            V        K     +  
Sbjct: 65 ENVQVKDIVEDKTEAKKMFD 84


>gi|238028851|ref|YP_002913082.1| flagellar basal body rod protein FlgC [Burkholderia glumae BGR1]
 gi|237878045|gb|ACR30378.1| Flagellar basal-body rod protein FlgC [Burkholderia glumae BGR1]
          Length = 141

 Score = 56.4 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 12/94 (12%), Positives = 35/94 (37%), Gaps = 12/94 (12%)

Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNAN 205
           G  ++ G+ +  + +  V      ++      +P                 G++   N +
Sbjct: 57  GARTRSGQGVGGVQVKQVIDDPSPMKTSYDPSNPTADAN------------GYVTLPNVD 104

Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            + EM  MI  ++ + +    ++  ++ ML+ + 
Sbjct: 105 PVQEMVNMISASRSYQANVETLNTAKQLMLKTLT 138



 Score = 41.0 bits (94), Expect = 0.14,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 27/88 (30%), Gaps = 6/88 (6%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSEVVGAIKNDIDQK 55
             F++  +A  A  QRL+  A N++N     G     +R  +V F             +
Sbjct: 5  MNIFDVAGSAMSAESQRLNVTASNLANADSVTGPDGKPYRAKQVVFETQPLGGARTRSGQ 64

Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFA 83
                 K+ +        S       A
Sbjct: 65 GVGGVQVKQVIDDPSPMKTSYDPSNPTA 92


>gi|186477695|ref|YP_001859165.1| flagellar basal body rod protein FlgC [Burkholderia phymatum
           STM815]
 gi|184194154|gb|ACC72119.1| flagellar basal-body rod protein FlgC [Burkholderia phymatum
           STM815]
          Length = 141

 Score = 56.4 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 27/61 (44%)

Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           P    T  E  +      G+++  N + + EM  MI  ++ + +    ++  ++ ML+ +
Sbjct: 78  PTPMKTSYEPGNPAADANGYVQLPNVDPVQEMVNMISASRSYQANVETLNTAKQLMLKTL 137

Query: 239 R 239
            
Sbjct: 138 T 138



 Score = 45.6 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 33/105 (31%), Gaps = 7/105 (6%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS-EVVGAIKNDIDQ 54
              FN+  +A  A  QRL+  A N++N   T G     ++  +V F+   +G  +    Q
Sbjct: 5   MNIFNVAGSAMSAQSQRLNVTASNLANADSTTGPDGKPYKAKQVVFAVNPIGGARTGSGQ 64

Query: 55  KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
           ++  V                          G        P   +
Sbjct: 65  QVGGVQVTGVIDDPTPMKTSYEPGNPAADANGYVQLPNVDPVQEM 109


>gi|149189842|ref|ZP_01868122.1| putative flagellar hook-associated protein [Vibrio shilonii AK1]
 gi|148836328|gb|EDL53285.1| putative flagellar hook-associated protein [Vibrio shilonii AK1]
          Length = 457

 Score = 56.4 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 31/99 (31%), Gaps = 1/99 (1%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
               NI L+   A    L   A N++N +T G+   +   + + G   +  +     V  
Sbjct: 1   MNLVNIALSGMNANRVALDVTAQNVANINTPGYSRQQAVMASLAGGKYDKTNP-GMGVEV 59

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL 100
                  +      T +    A     + +  S    +L
Sbjct: 60  TSIRRVTDQYLVKQTWSTASAANYASGYTSAMSQLENML 98


>gi|253682065|ref|ZP_04862862.1| flagellar basal-body rod protein FlgC [Clostridium botulinum D str.
           1873]
 gi|253561777|gb|EES91229.1| flagellar basal-body rod protein FlgC [Clostridium botulinum D str.
           1873]
          Length = 145

 Score = 56.4 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 24/46 (52%), Gaps = 1/46 (2%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G++   N N + EM  MI  T+ + +  T I+ ++   ++A+  I 
Sbjct: 100 GYVLMPNVNILNEMADMIAATRAYEANVTAINSSKSMFMKAL-EIG 144



 Score = 39.9 bits (91), Expect = 0.33,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 20/49 (40%), Gaps = 8/49 (16%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV-G-------FRTIKVKFSE 43
          +S  I  +   A   R+ T++ N++N  T  G       +R     F E
Sbjct: 5  SSLRISASGLSAERLRMDTISSNITNFKTTRGKDGNKEPYRRKIAVFQE 53


>gi|168698712|ref|ZP_02730989.1| Flagellar basal body rod protein [Gemmata obscuriglobus UQM 2246]
          Length = 144

 Score = 56.4 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 6/53 (11%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDID 53
          I      A   R+  +A+N++N +T     G  +R   V F E++GA      
Sbjct: 12 ISGTGMSAERLRMEVIANNIANANTTRSANGGPYRRQDVVFEELLGAAAGPFG 64



 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 8/47 (17%), Positives = 18/47 (38%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           GF+   N     EM  ++  T+ + +         +   +A+  + S
Sbjct: 98  GFVRMPNVQLPIEMVNLLTATRAYEANLRAAQTFRQMNEQALVLLRS 144


>gi|71282480|ref|YP_268228.1| flagellar hook-associated protein [Colwellia psychrerythraea 34H]
 gi|71148220|gb|AAZ28693.1| flagellar hook-associated protein [Colwellia psychrerythraea 34H]
          Length = 665

 Score = 56.4 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/229 (13%), Positives = 63/229 (27%), Gaps = 17/229 (7%)

Query: 1   MQTSFN-IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFV 59
           M  S    G++  LA +Q+L+T   N+SN +T G+   + + +  VG    +        
Sbjct: 1   MSVSLYQSGMSGLLAAQQQLATTGHNISNVNTDGYNRQRAEQNATVGLNNGNNYIGGGTY 60

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF--KVTDDGSLVSA 117
                 L  +         +            L     ++ T        +      ++ 
Sbjct: 61  IQDITRLYDQFSHKEQITNQSKLGNADSLHARLTQLDQVMSTSGNAVVGSLDQFYQALNG 120

Query: 118 SGKYPVLDM-----ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172
               P          +    +                     I  +     ++SQ   + 
Sbjct: 121 VADNPNDSGLRSIVLNQANTLSNDFNQLTNNLDQMTKSINGEIEQVASKISEISQELAKI 180

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSN---ANSMYE----MGQMI 214
             + +       P + L       G  E SN    N++ +    M  MI
Sbjct: 181 NETIMHSQQGGQPNDLLDKRDQLIG--ELSNYTQVNTVKDANNVMTVMI 227


>gi|295690745|ref|YP_003594438.1| flagellar hook-associated protein FlgK [Caulobacter segnis ATCC
           21756]
 gi|295432648|gb|ADG11820.1| flagellar hook-associated protein FlgK [Caulobacter segnis ATCC
           21756]
          Length = 703

 Score = 56.4 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/223 (10%), Positives = 65/223 (29%), Gaps = 20/223 (8%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
            +  +   +   A +  L   +DN++N +T G+    +  S ++      I   I  +  
Sbjct: 4   NSIMSTATSGMTAAQTGLRVTSDNIANVNTNGYVRKTISQSNMLS-NGMGIGVSIDAIKR 62

Query: 62  GKEYLSKEVGSFISTGTELDFALEG-----DAWFALESPRGIILTRDGRFKVTDDGSLVS 116
             +          ++ +     +          F   +      TR          +  +
Sbjct: 63  ATDRFLTTASLNAASDSSRATVIAQSLNNVQQLFGDPTGSTSFFTRLD----DVFTAFSA 118

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN-- 174
           A        + +  +    +    +      IS+ GK + T     VD     + + +  
Sbjct: 119 AQDDPSSALLRTQALTRVDQFLSESSRITSSISKLGKDVDTRISGDVDRVNDLLSQIDAL 178

Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217
           +           +      V+ G         + E+ +++++ 
Sbjct: 179 NTDITRAKVAGTDATGAENVQSG--------LVDELSKLMNVQ 213



 Score = 35.6 bits (80), Expect = 5.9,   Method: Composition-based stats.
 Identities = 7/30 (23%), Positives = 11/30 (36%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
            N   E+  +    Q FN+   LI   +  
Sbjct: 665 VNLDEELINLTTYQQAFNASARLIQAAKDM 694


>gi|15615023|ref|NP_243326.1| flagellar basal body rod protein FlgC [Bacillus halodurans C-125]
 gi|10175080|dbj|BAB06179.1| flagellar basal-body rod protein [Bacillus halodurans C-125]
          Length = 152

 Score = 56.4 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 25/42 (59%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++E  N + + EM  ++  T+ + +  T ++ ++  +++A+
Sbjct: 107 GYVEMPNVDPLREMVDLMSATRSYEANVTTLNASKNILMKAL 148



 Score = 39.1 bits (89), Expect = 0.50,   Method: Composition-based stats.
 Identities = 8/29 (27%), Positives = 15/29 (51%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTV 32
            NI  +A  +   R+  ++ NM+N +T 
Sbjct: 6  GMNISGSALTSQRLRMDVISANMANAETT 34


>gi|167568105|ref|ZP_02361021.1| flagellar basal body rod protein FlgC [Burkholderia oklahomensis
           EO147]
 gi|167574223|ref|ZP_02367097.1| flagellar basal body rod protein FlgC [Burkholderia oklahomensis
           C6786]
          Length = 141

 Score = 56.4 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 8/45 (17%), Positives = 23/45 (51%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           + G++   N + + EM  MI  ++ + +    ++  ++ ML+ + 
Sbjct: 94  QNGYVTMPNVDPVQEMVNMISASRSYQANVETLNTAKQLMLKTLT 138



 Score = 43.3 bits (100), Expect = 0.033,   Method: Composition-based stats.
 Identities = 13/99 (13%), Positives = 34/99 (34%), Gaps = 7/99 (7%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSEVVGAIKNDIDQK 55
              F++  +A  A  QRL+  A N++N     G     ++  +V F+            +
Sbjct: 5   MNIFDVAGSAMSAQSQRLNVTASNLANADSVTGPDGKPYKAKQVVFATAPMGRARTASGQ 64

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES 94
                   + +  +     +     + A + + +  + +
Sbjct: 65  GVGGVQVTKVID-DPSPMKTAYDPSNPAADQNGYVTMPN 102


>gi|330946986|gb|EGH47794.1| flagellar hook protein FlgE [Pseudomonas syringae pv. pisi str.
           1704B]
          Length = 80

 Score = 56.4 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 9/55 (16%), Positives = 19/55 (34%)

Query: 185 PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             +  +   +    LE+SN +   E+  +I     + +    I      M   I+
Sbjct: 24  APQSGTLGYITGQALEESNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQTTIQ 78


>gi|225849147|ref|YP_002729311.1| flagellar basal-body rod protein FlgC [Sulfurihydrogenibium
           azorense Az-Fu1]
 gi|225643183|gb|ACN98233.1| flagellar basal-body rod protein FlgC [Sulfurihydrogenibium
           azorense Az-Fu1]
          Length = 137

 Score = 56.4 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 24/48 (50%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           + G++   N + + EM  M+   + + +  T  + ++  +L+++  I 
Sbjct: 89  QNGYVRLPNVDPIREMVDMMSAMRSYEANLTAFNTHKDMILKSLEIIR 136



 Score = 43.7 bits (101), Expect = 0.024,   Method: Composition-based stats.
 Identities = 14/88 (15%), Positives = 28/88 (31%), Gaps = 7/88 (7%)

Query: 1  MQ-TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDID 53
          M      + ++   A   R+   A N++N ++     G  +R     F  V+ +   +  
Sbjct: 1  MIFKGLEVSVSGMQAERVRIDLSASNLANVNSTRAEDGQPYRRKVPVFEAVLDSQSKNTP 60

Query: 54 QKISFVASGKEYLSKEVGSFISTGTELD 81
               V   +   S     F     + D
Sbjct: 61 IYKVRVKEIQTDPSPFKLKFDPNNPDAD 88


>gi|167469720|ref|ZP_02334424.1| flagellar hook protein FlgE [Yersinia pestis FV-1]
          Length = 73

 Score = 56.0 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 28/58 (48%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           F+  ++   A    L  + +N++N+ T GF+   V F+++    +  +  K++ +  
Sbjct: 2  GFSQAVSGMNAASSNLDVIGNNIANSATSGFKAGSVSFADMFAGSQTGMGVKVAGITQ 59


>gi|218886418|ref|YP_002435739.1| hypothetical protein DvMF_1322 [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218757372|gb|ACL08271.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           vulgaris str. 'Miyazaki F']
          Length = 136

 Score = 56.0 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 16/132 (12%), Positives = 36/132 (27%)

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
              G+ +SA   +      +         + F   +    +         G         
Sbjct: 3   DGFGTPLSALDAFGTSMAVTANNVANMNTDEFRASDVRLQTGPASQDGQDGQERGVQVAE 62

Query: 169 FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228
             +    G         +     VTV+   +E SN +   EM  M+   + F +   ++ 
Sbjct: 63  IRQSTTEGPLRMDLRRVVHADGSVTVETSAIEGSNTDVANEMVSMLTDQRAFEANAAVVR 122

Query: 229 ENEKSMLEAIRN 240
             ++     +  
Sbjct: 123 ARDEMTGILVDR 134



 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 28/82 (34%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M   F   L+A  A    ++  A+N++N +T  FR   V+      +      Q+     
Sbjct: 1  MIDGFGTPLSALDAFGTSMAVTANNVANMNTDEFRASDVRLQTGPASQDGQDGQERGVQV 60

Query: 61 SGKEYLSKEVGSFISTGTELDF 82
          +     + E    +     +  
Sbjct: 61 AEIRQSTTEGPLRMDLRRVVHA 82


>gi|296186751|ref|ZP_06855153.1| flagellar hook-associated protein FlgK [Clostridium
          carboxidivorans P7]
 gi|296048788|gb|EFG88220.1| flagellar hook-associated protein FlgK [Clostridium
          carboxidivorans P7]
          Length = 463

 Score = 56.0 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 11/88 (12%), Positives = 33/88 (37%), Gaps = 4/88 (4%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV----VGAIKNDIDQKISFVA 60
           NI  +   A ++ +   + N++N +T G+   + +        + ++ N +        
Sbjct: 8  LNISKSGMFAQQRCIDVTSHNIANANTDGYSRQRAELQTTKPFPMPSVNNAVGPGQLGTG 67

Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDA 88
               + +   SF+     ++  ++G  
Sbjct: 68 VEVTTIDRIRDSFLDYQIRVEKGVDGQY 95


>gi|147678427|ref|YP_001212642.1| flagellar basal body protein [Pelotomaculum thermopropionicum SI]
 gi|146274524|dbj|BAF60273.1| flagellar basal body protein [Pelotomaculum thermopropionicum SI]
          Length = 133

 Score = 56.0 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 20/55 (36%), Gaps = 6/55 (10%)

Query: 5  FNIGLA------AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
             GL          A   R   +A+N++N +T GF+   V+F  +         
Sbjct: 1  MFSGLTMQALKKGLDAAALRHRVIANNIANANTPGFKKSAVEFESLFKEALGRNP 55


>gi|255523748|ref|ZP_05390714.1| flagellar hook-associated protein FlgK [Clostridium
          carboxidivorans P7]
 gi|255512617|gb|EET88891.1| flagellar hook-associated protein FlgK [Clostridium
          carboxidivorans P7]
          Length = 649

 Score = 56.0 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 11/88 (12%), Positives = 33/88 (37%), Gaps = 4/88 (4%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV----VGAIKNDIDQKISFVA 60
           NI  +   A ++ +   + N++N +T G+   + +        + ++ N +        
Sbjct: 8  LNISKSGMFAQQRCIDVTSHNIANANTDGYSRQRAELQTTKPFPMPSVNNAVGPGQLGTG 67

Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDA 88
               + +   SF+     ++  ++G  
Sbjct: 68 VEVTTIDRIRDSFLDYQIRVEKGVDGQY 95



 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 6/40 (15%), Positives = 15/40 (37%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           S  +   EM  ++     + +   LI   ++ +   I  +
Sbjct: 608 SGVSLDEEMANLVQFQHCYQANAKLISTVDQLLDVVINGL 647


>gi|83646774|ref|YP_435209.1| flagellar hook protein FlgE [Hahella chejuensis KCTC 2396]
 gi|83634817|gb|ABC30784.1| Flagellar hook protein FlgE [Hahella chejuensis KCTC 2396]
          Length = 660

 Score = 56.0 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 10/90 (11%), Positives = 29/90 (32%), Gaps = 4/90 (4%)

Query: 157 TMGLYSVDMSQGFVRRENS----GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQ 212
            + + +            S    G    I            VK   +E SN     E  +
Sbjct: 569 QVAMANFLNVNALTSEGGSLFSAGEDAGITVGAANSGGFGKVKGESIELSNVELSREFAE 628

Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           +I + + + + + +++ + + +     ++ 
Sbjct: 629 IIIIQRGYQASSQVMNVSNEMIENLYNSVR 658



 Score = 55.6 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 1/92 (1%)

Query: 30  DTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAW 89
           +T GF+   V F E+     +        V      +    G   +TG   D A++G  +
Sbjct: 31  NTPGFKGRDVFFQEL-NPYSDGQGSHYDGVKVNGSGIRFSAGDLTTTGNNTDLAIDGAGF 89

Query: 90  FALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
           F L      + TR G+F++ +DG LV  +   
Sbjct: 90  FILRGEGENLYTRAGQFRLDNDGYLVDQNSNR 121


>gi|315281336|ref|ZP_07869982.1| flagellar basal body rod protein FlgG [Listeria marthii FSL S4-120]
 gi|313615012|gb|EFR88510.1| flagellar basal body rod protein FlgG [Listeria marthii FSL S4-120]
          Length = 152

 Score = 56.0 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 50/144 (34%), Gaps = 2/144 (1%)

Query: 95  PRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV 154
            R I L+R G+F     G L +A G   +           +             ++  + 
Sbjct: 1   DREISLSRGGQFHSDQFGFLRTADGANLLSATGEAIQVGQKTSIRAEANGDLYNAETNQY 60

Query: 155 IATMGLYSVDMSQG--FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQ 212
           +  +G   V  +Q    V+     +  N   T         ++ G +E SN +   EM Q
Sbjct: 61  LGRLGTKFVSANQADSLVKDGEGRLHVNGVNTMNLPAGQGIIQNGVIETSNVDLGVEMVQ 120

Query: 213 MIHLTQKFNSITTLIDENEKSMLE 236
           ++   +   +   +++  +K   +
Sbjct: 121 LMDNQRMVQASKNVVNMFDKVYDK 144


>gi|300722684|ref|YP_003711974.1| flagellar basal-body rod cell-proximal protein [Xenorhabdus
           nematophila ATCC 19061]
 gi|297629191|emb|CBJ89787.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Xenorhabdus nematophila ATCC 19061]
          Length = 134

 Score = 56.0 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N + + EM   I  ++ + +   +++  +  ML+ + 
Sbjct: 89  GYVRMPNVDVVGEMVNTISASRSYQANVEVLNTTKSIMLKTLT 131



 Score = 39.1 bits (89), Expect = 0.58,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 6/47 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42
           + F+I  +A  A  QRL+  A NM+N    VG     +R  +V F 
Sbjct: 4  LSIFDIASSALSAQSQRLNVSASNMANADSVVGPDGEPYRAKQVVFR 50


>gi|206890290|ref|YP_002248113.1| flagellar basal-body rod protein FlgC [Thermodesulfovibrio
           yellowstonii DSM 11347]
 gi|206742228|gb|ACI21285.1| flagellar basal-body rod protein FlgC [Thermodesulfovibrio
           yellowstonii DSM 11347]
          Length = 135

 Score = 56.0 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 41/125 (32%), Gaps = 3/125 (2%)

Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRE 173
            VSA+G        +V              E G   +K  +  T     +       R  
Sbjct: 9   KVSATGLEAQKIRLNVIASNLANINSTKTPEGGPYRRKDVLFTTYMYDQISQGVDVQRIV 68

Query: 174 NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
                  I   P    +    K G+++  N N M EM  +I  ++ + +  T+I+  +  
Sbjct: 69  EDQRPFRIVYEPSHPDAD---KNGYVKYPNVNPMEEMINLISASRAYEANLTMINSYKDM 125

Query: 234 MLEAI 238
            +  +
Sbjct: 126 FMRTL 130



 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/88 (13%), Positives = 26/88 (29%), Gaps = 6/88 (6%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDIDQKISF 58
            +      A + RL+ +A N++N ++     G  +R   V F+  +    +        
Sbjct: 8  LKVSATGLEAQKIRLNVIASNLANINSTKTPEGGPYRRKDVLFTTYMYDQISQGVDVQRI 67

Query: 59 VASGKEYLSKEVGSFISTGTELDFALEG 86
          V   + +      S              
Sbjct: 68 VEDQRPFRIVYEPSHPDADKNGYVKYPN 95


>gi|288553067|ref|YP_003425002.1| flagellar basal body rod protein FlgC [Bacillus pseudofirmus OF4]
 gi|288544227|gb|ADC48110.1| flagellar basal body rod protein FlgC [Bacillus pseudofirmus OF4]
          Length = 151

 Score = 56.0 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 24/42 (57%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++E  N + + EM  ++  T+ + +  T ++  +  +++A+
Sbjct: 106 GYVEMPNVDPLREMVDLMTATRSYEANVTSLNATKNMLMKAL 147



 Score = 40.2 bits (92), Expect = 0.22,   Method: Composition-based stats.
 Identities = 8/30 (26%), Positives = 15/30 (50%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV 32
          + FN   +A      R+  ++ NM+N +T 
Sbjct: 5  SGFNASASALTTQRLRMDVISSNMANAETT 34


>gi|2494522|sp|P70911|FLGC_BORHE RecName: Full=Flagellar basal-body rod protein flgC
 gi|1621621|gb|AAB51474.1| flagellar rod protein FLgC [Borrelia hermsii]
          Length = 59

 Score = 56.0 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 6/46 (13%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFS 42
          +S N       A   RL  +A+N++N +T        +R  +V F+
Sbjct: 5  SSINTASTGLTAQRLRLDVIANNIANVETTRTSEGGSYRRQRVIFA 50


>gi|311105933|ref|YP_003978786.1| flagellar basal-body rod protein FlgC [Achromobacter xylosoxidans
           A8]
 gi|310760622|gb|ADP16071.1| flagellar basal-body rod protein FlgC [Achromobacter xylosoxidans
           A8]
          Length = 139

 Score = 56.0 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 6/45 (13%), Positives = 21/45 (46%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +G++   N + + E   MI  ++ + +   +++  +  M + + 
Sbjct: 91  AQGYVSMPNVDPVAETVNMIAASRSYQANVEVLNTAKALMQKTLT 135



 Score = 37.5 bits (85), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 6/47 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42
           + F+I  +A  A  QR++  A NM+N    VG     +R  +V F 
Sbjct: 4  LSIFDIAGSALSAQSQRMNVAASNMANADSVVGPDGKPYRARQVVFQ 50


>gi|330839540|ref|YP_004414120.1| flagellar basal-body rod protein FlgB [Selenomonas sputigena ATCC
          35185]
 gi|329747304|gb|AEC00661.1| flagellar basal-body rod protein FlgB [Selenomonas sputigena ATCC
          35185]
          Length = 137

 Score = 56.0 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 8/45 (17%), Positives = 20/45 (44%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46
            + ++      A   R   ++ N++N +T  F+   V F +++ 
Sbjct: 8  NRALDVMQRGMGAANLRQEVISHNIANVNTPNFKKSNVVFEDLLA 52


>gi|188997545|ref|YP_001931796.1| flagellar basal-body rod protein FlgC [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|188932612|gb|ACD67242.1| flagellar basal-body rod protein FlgC [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 136

 Score = 56.0 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 7/46 (15%), Positives = 23/46 (50%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G++   N + + EM  M+   + + +  T  + ++  +++++  I 
Sbjct: 90  GYVRLPNVDPIREMVDMMTAMRTYEANLTAFNTHKDMLIKSLEIIR 135



 Score = 43.3 bits (100), Expect = 0.026,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 20/53 (37%), Gaps = 6/53 (11%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIK 49
              I ++   A   R+   A N++N ++     G  +R     F  V+ A  
Sbjct: 4  KGLEISVSGMQAERVRIDLAASNLANVNSTHTENGQPYRRKVPVFEAVLDAQS 56


>gi|134300250|ref|YP_001113746.1| flagellar basal-body rod protein FlgB [Desulfotomaculum reducens
          MI-1]
 gi|134052950|gb|ABO50921.1| flagellar basal-body rod protein FlgB [Desulfotomaculum reducens
          MI-1]
          Length = 132

 Score = 56.0 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 21/50 (42%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
             A   R   +A+N++N +T GF+   V F + + A   +    +    
Sbjct: 15 GLDAGAARQRVIANNIANFNTPGFKKSYVSFEDQLKAALGNSGVSLKGTH 64


>gi|114762160|ref|ZP_01441628.1| flagellar basal-body rod protein FlgC [Pelagibaca bermudensis
          HTCC2601]
 gi|114545184|gb|EAU48187.1| flagellar basal-body rod protein FlgC [Roseovarius sp. HTCC2601]
          Length = 130

 Score = 56.0 bits (133), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 21/39 (53%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS 42
          + ++  +   A   RL  V++N++N DT G+R   + F 
Sbjct: 7  ALSVSSSGLRAQADRLRVVSENIANVDTPGYRRKTLPFE 45



 Score = 40.6 bits (93), Expect = 0.21,   Method: Composition-based stats.
 Identities = 4/37 (10%), Positives = 16/37 (43%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           GF + +N + + E+       + + +   + ++  + 
Sbjct: 83  GFYDGTNVDLIVELADAREAQRSYEANLKMFEQTRQM 119


>gi|114320063|ref|YP_741746.1| flagellar hook-associated protein FlgK [Alkalilimnicola ehrlichii
          MLHE-1]
 gi|114226457|gb|ABI56256.1| flagellar hook-associated protein FlgK [Alkalilimnicola ehrlichii
          MLHE-1]
          Length = 695

 Score = 56.0 bits (133), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 31/80 (38%), Gaps = 1/80 (1%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M  + N G++  +A ++ L+  + N+SN +T GF   +V+ S  +    +      + V 
Sbjct: 1  MSGTMNTGISGLMAAQRALAATSHNISNVNTEGFSRQRVEQSSRL-PTGSGAGFVGNGVQ 59

Query: 61 SGKEYLSKEVGSFISTGTEL 80
                  +     +     
Sbjct: 60 VDTVRRLADQNLIENVRNNT 79


>gi|312793870|ref|YP_004026793.1| flagellar hook-associated protein flgk [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312181010|gb|ADQ41180.1| flagellar hook-associated protein FlgK [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 527

 Score = 56.0 bits (133), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 22/192 (11%), Positives = 57/192 (29%), Gaps = 11/192 (5%)

Query: 51  DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTD 110
            I   ++ +      L ++       G  L+   +G  +F     +     RD +     
Sbjct: 343 GIPYYLNRLNEFARKLIEKFNELHKKGWSLNGQNKGINFFEPPVGQKFFYARDIKVSDAI 402

Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170
              L + +  Y V ++      +    ++ N     +  +    + ++       SQG  
Sbjct: 403 MNDLNNIATTYDVNNLPGGNDLVVDMLKLRNDTSIFKEGKFEDFLKSLISNLGVDSQG-- 460

Query: 171 RRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
                  + N      +  +      G       +   EM  +I     F +   +I+  
Sbjct: 461 ---AKNFAENQKVMVTQLDNRRQAVSG------VSIDEEMTNLIKYQHGFQASARMINAF 511

Query: 231 EKSMLEAIRNIA 242
           ++ +   +  + 
Sbjct: 512 DEMLDTIVNRLG 523



 Score = 43.7 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 11/77 (14%), Positives = 21/77 (27%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
             I         + L   + N++N  T G+    +       + K         V  G 
Sbjct: 5  GLEIARTGIFVNRKGLEVTSHNVANASTPGYTRQVLNVKSNPPSSKVGFYSPKFQVGMGA 64

Query: 64 EYLSKEVGSFISTGTEL 80
          +  S E    +    + 
Sbjct: 65 DVQSLEQIRDMFLDMQY 81


>gi|293395581|ref|ZP_06639864.1| flagellar basal-body rod protein FlgC [Serratia odorifera DSM 4582]
 gi|291421900|gb|EFE95146.1| flagellar basal-body rod protein FlgC [Serratia odorifera DSM 4582]
          Length = 134

 Score = 56.0 bits (133), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 14/127 (11%), Positives = 42/127 (33%)

Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172
           ++   SG         + +         +V        + K +      +     G VR 
Sbjct: 5   NIFDISGSALSAQSQRLNVSASNMANADSVSGPDGQPYRAKQVVFEVAAAPGQPTGGVRV 64

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            +    P       +  + +   +G++   N + + EM   I  ++ + +   +++  + 
Sbjct: 65  ASIVDDPAPERLVFQPGNPLADAKGYVRMPNVDVVGEMVNTISASRSYQANVEVLNTTKS 124

Query: 233 SMLEAIR 239
            M++ + 
Sbjct: 125 MMMKTLT 131



 Score = 36.0 bits (81), Expect = 4.2,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 6/47 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFS 42
             F+I  +A  A  QRL+  A NM+N D+V       +R  +V F 
Sbjct: 4  LNIFDISGSALSAQSQRLNVSASNMANADSVSGPDGQPYRAKQVVFE 50


>gi|149375027|ref|ZP_01892800.1| Flagellar hook-associated protein [Marinobacter algicola DG893]
 gi|149360916|gb|EDM49367.1| Flagellar hook-associated protein [Marinobacter algicola DG893]
          Length = 682

 Score = 56.0 bits (133), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 17/88 (19%), Positives = 33/88 (37%), Gaps = 3/88 (3%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M    NIGL   L  +  L+T  +N++N +T G+   +V+F                   
Sbjct: 1  MAGLINIGLTGILGHQAALNTTGNNITNANTPGYSRQEVQFET---QSAQRTGAGSVGTG 57

Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDA 88
               + +    +++     D +L G+ 
Sbjct: 58 VSITNIRRLANEYLTQQVREDSSLFGEQ 85


>gi|317406203|gb|EFV86452.1| flagellar basal-body rod protein FlgC [Achromobacter xylosoxidans
           C54]
          Length = 139

 Score = 56.0 bits (133), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 6/45 (13%), Positives = 21/45 (46%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +G++   N + + E   MI  ++ + +   +++  +  M + + 
Sbjct: 91  AQGYVSMPNVDPVAETVNMIAASRSYQANVEVLNTAKSLMQKTLT 135



 Score = 37.2 bits (84), Expect = 2.3,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 6/47 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42
           + F+I  +A  A  QR++  A NM+N    VG     +R  +V F 
Sbjct: 4  LSIFDIAGSALSAQSQRMNVAASNMANADSVVGPDGQPYRARQVVFQ 50


>gi|284041493|ref|YP_003391833.1| flagellar hook-associated protein FlgK [Conexibacter woesei DSM
          14684]
 gi|283945714|gb|ADB48458.1| flagellar hook-associated protein FlgK [Conexibacter woesei DSM
          14684]
          Length = 443

 Score = 56.0 bits (133), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 32/86 (37%), Gaps = 1/86 (1%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
               L   +A +Q L+T   N++N +T GF   +  F  +  A++   +   + + +  
Sbjct: 8  GLQTSLRGLIAHQQALNTTGHNVANANTPGFSRQEAIFGAM-SALRLPTNSGTTGLGAQL 66

Query: 64 EYLSKEVGSFISTGTELDFALEGDAW 89
                +G      + LD    G   
Sbjct: 67 GTGVDVLGIRRIRDSFLDLQFRGTNM 92



 Score = 54.1 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 5/39 (12%), Positives = 13/39 (33%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            +   EM  MI   + + +    +   ++ +   I    
Sbjct: 401 VSPDEEMTNMIRFQRGYQASARTMSTLDEMLDTLINRTG 439


>gi|239628952|ref|ZP_04671983.1| conserved hypothetical protein [Clostridiales bacterium
          1_7_47_FAA]
 gi|239519098|gb|EEQ58964.1| conserved hypothetical protein [Clostridiales bacterium
          1_7_47FAA]
          Length = 118

 Score = 56.0 bits (133), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 26/58 (44%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFV 59
            +         A+  +    + N++N +T GF+  KV+F +V+   +  +++    V
Sbjct: 6  DRALGALERGMDAMWLKQQVSSHNIANVETPGFKAKKVEFKDVLRETEQGVERIAKPV 63


>gi|207728344|ref|YP_002256738.1| flagellar basal-body rod protein flgc [Ralstonia solanacearum
           MolK2]
 gi|207739739|ref|YP_002258132.1| flagellar basal-body rod protein flgc [Ralstonia solanacearum
           IPO1609]
 gi|206591590|emb|CAQ57202.1| flagellar basal-body rod protein flgc [Ralstonia solanacearum
           MolK2]
 gi|206593121|emb|CAQ60027.1| flagellar basal-body rod protein flgc [Ralstonia solanacearum
           IPO1609]
          Length = 168

 Score = 56.0 bits (133), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 20/43 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N + + EM  MI  ++ + +   + +  +    +A+ 
Sbjct: 123 GYVTMPNVDVVDEMVNMISASRSYQANVEVANTTKTMAAKALT 165



 Score = 40.6 bits (93), Expect = 0.21,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 31/85 (36%), Gaps = 6/85 (7%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDT------VGFRTIKVKFSEVVGAIKNDIDQKI 56
              ++  +A  A  +R++ VA N++N ++        +R  +V FS   G         +
Sbjct: 38  KVMDVAGSALTAQSKRMNVVASNLANAESVTGPDGTAYRAKQVVFSPEQGTDGYATGVSV 97

Query: 57  SFVASGKEYLSKEVGSFISTGTELD 81
             V        K +    +   + D
Sbjct: 98  DGVVEDTVTPMKRMHQPGNPLADAD 122


>gi|292669735|ref|ZP_06603161.1| flagellar basal-body rod protein FlgB [Selenomonas noxia ATCC
          43541]
 gi|292648532|gb|EFF66504.1| flagellar basal-body rod protein FlgB [Selenomonas noxia ATCC
          43541]
          Length = 140

 Score = 55.6 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 37/89 (41%), Gaps = 5/89 (5%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN-DIDQKISFVASGK 63
           +IG  A  A   R   +++N++N +T  FR   V+F +++      D D  +  V +  
Sbjct: 11 IDIGSRAMAAASLRHEVLSNNIANVNTPYFRRSHVRFEDLLKQELGMDSDPLMKVVRTHD 70

Query: 64 EY----LSKEVGSFISTGTELDFALEGDA 88
           +       +  + I      +  L+G+ 
Sbjct: 71 RHLPAAFHGKARAVIEQDATTNMRLDGNN 99


>gi|310641541|ref|YP_003946299.1| flagellar basal-body rod protein flgc [Paenibacillus polymyxa SC2]
 gi|309246491|gb|ADO56058.1| Flagellar basal-body rod protein FlgC [Paenibacillus polymyxa SC2]
          Length = 150

 Score = 55.6 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 23/42 (54%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N + M EM  MI  T+ + +  T ++ ++  + +A+
Sbjct: 105 GYVYMPNVDIMKEMVDMISATRSYEANVTALNASKAMVSKAL 146



 Score = 48.3 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/115 (14%), Positives = 36/115 (31%), Gaps = 17/115 (14%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTV------G----FRTIKVK-------FSEV 44
              F+I  +A  A   R+  ++ N++N +T       G    +R   V        F++V
Sbjct: 4   NNGFDISASALTAQRLRMDVISSNIANAETTRAKVENGQAIPYRRKTVVLEPNQSGFADV 63

Query: 45  VGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
           + A         + V   +    +     +      D   +G  +         +
Sbjct: 64  LKAQMEGSSTSAAGVKVSQIQEDQSPLKPVYNPGHPDADKDGYVYMPNVDIMKEM 118


>gi|51894142|ref|YP_076833.1| flagella basal body rod protein [Symbiobacterium thermophilum IAM
           14863]
 gi|51857831|dbj|BAD41989.1| flagella basal body rod protein [Symbiobacterium thermophilum IAM
           14863]
          Length = 119

 Score = 55.6 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 38/109 (34%), Gaps = 10/109 (9%)

Query: 11  AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI---KNDIDQKISFVASGKEYLS 67
           A  A   R   +A+N++N  T GF+  +V F   +        D DQ    V    + + 
Sbjct: 14  AIDAASLRQRVLANNLANAMTPGFKRSRVDFETELARALAKGGDPDQVRPTVVRETDSIG 73

Query: 68  KEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVS 116
           +  G+ +    E         W+A        LTR           +++
Sbjct: 74  RPDGNNVDVEAESVKMAANQIWYA-------ALTRQINDHFDRLRMVIT 115


>gi|308068650|ref|YP_003870255.1| flagellar basal-body rod protein flgC [Paenibacillus polymyxa E681]
 gi|305857929|gb|ADM69717.1| Flagellar basal-body rod protein flgC [Paenibacillus polymyxa E681]
          Length = 150

 Score = 55.6 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 23/42 (54%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N + M EM  MI  T+ + +  T ++ ++  + +A+
Sbjct: 105 GYVYMPNVDIMKEMVDMISATRSYEANVTALNASKAMVSKAL 146



 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/115 (14%), Positives = 36/115 (31%), Gaps = 17/115 (14%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTV------G----FRTIKVK-------FSEV 44
              F+I  +A  A   R+  ++ N++N +T       G    +R   V        F++V
Sbjct: 4   NNGFDISASALTAQRLRMDVISSNIANAETTRAKVENGQAVPYRRKTVVLEPNQSGFADV 63

Query: 45  VGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
           + A         + V   +    +     +      D   +G  +         +
Sbjct: 64  LKAQMEGSSTSAAGVKVSQIQEDQSPLKPVYNPGHPDADKDGYVYMPNVDIMKEM 118


>gi|23099008|ref|NP_692474.1| flagellar basal body rod protein FlgC [Oceanobacillus iheyensis
           HTE831]
 gi|22777236|dbj|BAC13509.1| flagellar basal-body rod protein [Oceanobacillus iheyensis HTE831]
          Length = 151

 Score = 55.6 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 25/43 (58%)

Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           +G++E  N + + EM  ++  T+ + +  T  + ++  +++A+
Sbjct: 105 QGYVEMPNVDPLKEMVDLMSATRSYEANITAFNASKGMLMKAL 147



 Score = 39.5 bits (90), Expect = 0.38,   Method: Composition-based stats.
 Identities = 7/30 (23%), Positives = 13/30 (43%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV 32
           S N   +   A   R+  V+ N++N  + 
Sbjct: 5  NSMNTSASGLTAQRLRMDIVSSNVANAQST 34


>gi|331006032|ref|ZP_08329374.1| Flagellar basal-body rod protein FlgC [gamma proteobacterium
           IMCC1989]
 gi|330420161|gb|EGG94485.1| Flagellar basal-body rod protein FlgC [gamma proteobacterium
           IMCC1989]
          Length = 140

 Score = 55.6 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N + EM  MI  ++ F     +++  ++ M  A+ 
Sbjct: 95  GYVFYPNVNVVEEMTNMISASRSFQINVEVMNSAKQMMQRALT 137



 Score = 38.7 bits (88), Expect = 0.79,   Method: Composition-based stats.
 Identities = 17/114 (14%), Positives = 33/114 (28%), Gaps = 6/114 (5%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQK 55
            + F+I  +   A   RL+T A N++N D         +R     F+ +   +  D +  
Sbjct: 4   DSVFSIAGSGMNAQSLRLNTTASNLANADAAASSIDETYRGRHPVFASLKDTLSMDSNGN 63

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109
            S        +  +             + E    F         +T       +
Sbjct: 64  ASVGVGVLGIVESDAPLQPRYEPGHPLSNEEGYVFYPNVNVVEEMTNMISASRS 117


>gi|196018952|ref|XP_002118898.1| hypothetical protein TRIADDRAFT_62888 [Trichoplax adhaerens]
 gi|190577813|gb|EDV18617.1| hypothetical protein TRIADDRAFT_62888 [Trichoplax adhaerens]
          Length = 140

 Score = 55.6 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 8/133 (6%)

Query: 1   MQTSFNIGLA-AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFV 59
           M ++    +     A E     +  N+SN +T G++     F   +    ++  +    V
Sbjct: 1   MSSAGIAAVTQGMAAAEFITGKLGINLSNANTPGYKG----FGTYL---LSETSKYNGGV 53

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119
            +G    +   G    T  E D+A+EGD +F LE    I  TR GR+++ +   + S +G
Sbjct: 54  NAGSRINANIQGEISETKKEFDYAIEGDGFFPLECGEQIKFTRAGRYELDNQDFIKSPNG 113

Query: 120 KYPVLDMASVPIQ 132
            Y + +  +   Q
Sbjct: 114 CYLLGEAYTDDNQ 126


>gi|311030132|ref|ZP_07708222.1| flagellar basal body rod protein FlgC [Bacillus sp. m3-13]
          Length = 150

 Score = 55.6 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 7/46 (15%), Positives = 25/46 (54%), Gaps = 1/46 (2%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G++E  N + + EM  ++  ++ + +  T+ + ++  M++ +  + 
Sbjct: 105 GYVELPNVDPLKEMVDLMSASRSYEANVTVFNASKGIMMKTL-ELG 149



 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/32 (34%), Positives = 17/32 (53%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32
          M  S NI  +A  A   R+  ++ NM+N D+ 
Sbjct: 3  MFKSMNISSSALTAQRLRMDVISSNMANVDST 34


>gi|293605001|ref|ZP_06687397.1| flagellar basal-body rod protein FlgC [Achromobacter piechaudii
           ATCC 43553]
 gi|292816606|gb|EFF75691.1| flagellar basal-body rod protein FlgC [Achromobacter piechaudii
           ATCC 43553]
          Length = 139

 Score = 55.6 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 6/45 (13%), Positives = 21/45 (46%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +G++   N + + E   MI  ++ + +   +++  +  M + + 
Sbjct: 91  AQGYISMPNVDPVAETVNMIAASRSYQANVEVLNTAKSLMQKTLT 135



 Score = 39.1 bits (89), Expect = 0.54,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 6/47 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42
           + F+I  +A  A  QR++  A N++N    VG     +R  +V F 
Sbjct: 4  LSIFDIAGSALSAQSQRMNVTASNLANADSVVGPDGQPYRARQVVFQ 50


>gi|163789652|ref|ZP_02184090.1| Flagellar basal body rod protein FlgC [Carnobacterium sp. AT7]
 gi|159875184|gb|EDP69250.1| Flagellar basal body rod protein FlgC [Carnobacterium sp. AT7]
          Length = 145

 Score = 55.6 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 26/43 (60%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G+++ SN N   EM  M+   + +++  T ++ +++ + +A++
Sbjct: 99  GYVQQSNVNMADEMIDMMTTLRTYDANVTAMNASKEMLSKALQ 141



 Score = 39.9 bits (91), Expect = 0.36,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 26/60 (43%), Gaps = 7/60 (11%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTV----G---FRTIKVKFSEVVGAIKNDIDQKI 56
          S  I  +       +L T++ N++N +T     G   +   +V F E +  ++  ++ + 
Sbjct: 6  SMQINASGLSLERLKLDTISTNIANVNTTRTEDGEGPYLKKEVVFEESLKQVETSLNGQG 65


>gi|300311350|ref|YP_003775442.1| flagellar basal-body rod protein [Herbaspirillum seropedicae SmR1]
 gi|300074135|gb|ADJ63534.1| Flagellar basal-body rod protein [Herbaspirillum seropedicae SmR1]
          Length = 134

 Score = 55.6 bits (132), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N + EM  MI  ++ + +    ++  +  +++ + 
Sbjct: 89  GYVAMPNVNPVEEMVNMISASRAYQTNVETMNTAKAMLVKTLT 131



 Score = 42.2 bits (97), Expect = 0.070,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 33/92 (35%), Gaps = 9/92 (9%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTD-------TVGFRTIKVKFSEV-VGAIKNDIDQ 54
            FN+  +A  A  QRL+  A N++N D       T  ++  +V F  + VG +K+   +
Sbjct: 5  NIFNVAGSAMSAQSQRLNATASNIANADSATSPDGTP-YKAKQVVFQAIPVGGVKDSGVK 63

Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEG 86
            + V                       A+  
Sbjct: 64 VAAVVEDQAPPKLVYDPKHPMADGNGYVAMPN 95


>gi|15616183|ref|NP_244488.1| flagellar hook-associated protein FlgK [Bacillus halodurans
          C-125]
 gi|10176245|dbj|BAB07340.1| flagellar hook-associated protein 1 (HAP1) [Bacillus halodurans
          C-125]
          Length = 556

 Score = 55.6 bits (132), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 12/85 (14%), Positives = 22/85 (25%), Gaps = 2/85 (2%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
                   +  +  L TV  N++N +T G+   +V F  V       + +    +    
Sbjct: 8  GLETARRGMMTQQAALRTVGHNIANANTPGYTRQRVNF--VQTQAYPGVGRNAPSIPGQV 65

Query: 64 EYLSKEVGSFISTGTELDFALEGDA 88
                          LD       
Sbjct: 66 GTGVMAGSIQRIRDAFLDLQYRQHN 90



 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 16/41 (39%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  +   EM  MI     +N+    I + ++ +   I  + 
Sbjct: 512 SQVSLDEEMTLMIQFQHAYNAAARNITQIDEMLDRIINGMG 552


>gi|238916198|ref|YP_002929715.1| flagellar hook-associated protein 1 FlgK [Eubacterium eligens
          ATCC 27750]
 gi|238871558|gb|ACR71268.1| flagellar hook-associated protein 1 FlgK [Eubacterium eligens
          ATCC 27750]
          Length = 646

 Score = 55.6 bits (132), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 24/55 (43%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
             IG       +  L+T A N+SN +T G+   +V FS+      N  D+  S 
Sbjct: 7  GLFIGTTGLKTAQTALNTTAHNLSNINTSGYTRQQVTFSDTQYVRVNTSDKVSSP 61


>gi|211639036|emb|CAR67650.1| flagellar hook protein flge [Photorhabdus asymbiotica subsp.
          asymbiotica ATCC 43949]
          Length = 72

 Score = 55.6 bits (132), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 28/59 (47%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
          +F+  ++   A    L  + +N++N  T GF++    F+++    +  +  K+S +   
Sbjct: 2  AFSQAVSGLNAAAANLDVIGNNIANAATYGFKSSSAAFADIFAGSQVGLGVKMSGINQN 60


>gi|34498342|ref|NP_902557.1| flagellar basal-body rod protein flgC [Chromobacterium violaceum
           ATCC 12472]
 gi|34104196|gb|AAQ60555.1| flagellar basal-body rod protein flgC [Chromobacterium violaceum
           ATCC 12472]
          Length = 136

 Score = 55.6 bits (132), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 22/43 (51%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N + EM  MI  ++ + +   +++  +  + + ++
Sbjct: 91  GYVTMPNVNVVEEMADMIAASRAYQNNVEMMNTAKSLLQKTLQ 133



 Score = 38.7 bits (88), Expect = 0.76,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 6/48 (12%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNT----DTVG--FRTIKVKFSEV 44
            FNI  +A  A   RL+ VA N++N      + G  ++   V F+ V
Sbjct: 5  NLFNISGSALSAQSMRLNVVASNLANAESATSSTGQPYKGRHVVFTAV 52


>gi|15642198|ref|NP_231830.1| flagellar basal body rod protein FlgC [Vibrio cholerae O1 biovar El
           Tor str. N16961]
 gi|121586290|ref|ZP_01676080.1| flagellar basal-body rod protein FlgC [Vibrio cholerae 2740-80]
 gi|121726545|ref|ZP_01679794.1| flagellar basal-body rod protein FlgC [Vibrio cholerae V52]
 gi|147675208|ref|YP_001217716.1| flagellar basal body rod protein FlgC [Vibrio cholerae O395]
 gi|153817070|ref|ZP_01969737.1| flagellar basal-body rod protein FlgC [Vibrio cholerae NCTC 8457]
 gi|153820804|ref|ZP_01973471.1| flagellar basal-body rod protein FlgC [Vibrio cholerae B33]
 gi|227082323|ref|YP_002810874.1| flagellar basal-body rod protein FlgC [Vibrio cholerae M66-2]
 gi|229507724|ref|ZP_04397229.1| flagellar basal-body rod protein FlgC [Vibrio cholerae BX 330286]
 gi|229512081|ref|ZP_04401560.1| flagellar basal-body rod protein FlgC [Vibrio cholerae B33]
 gi|229519217|ref|ZP_04408660.1| flagellar basal-body rod protein FlgC [Vibrio cholerae RC9]
 gi|229607228|ref|YP_002877876.1| flagellar basal body rod protein FlgC [Vibrio cholerae MJ-1236]
 gi|254849328|ref|ZP_05238678.1| flagellar basal-body rod protein FlgC [Vibrio cholerae MO10]
 gi|255747102|ref|ZP_05421047.1| flagellar basal-body rod protein FlgC [Vibrio cholera CIRS 101]
 gi|262161354|ref|ZP_06030464.1| flagellar basal-body rod protein FlgC [Vibrio cholerae INDRE 91/1]
 gi|262167775|ref|ZP_06035477.1| flagellar basal-body rod protein FlgC [Vibrio cholerae RC27]
 gi|298500423|ref|ZP_07010228.1| flagellar basal-body rod protein FlgC [Vibrio cholerae MAK 757]
 gi|9656755|gb|AAF95344.1| flagellar basal-body rod protein FlgC [Vibrio cholerae O1 biovar El
           Tor str. N16961]
 gi|121549556|gb|EAX59582.1| flagellar basal-body rod protein FlgC [Vibrio cholerae 2740-80]
 gi|121630998|gb|EAX63377.1| flagellar basal-body rod protein FlgC [Vibrio cholerae V52]
 gi|126512338|gb|EAZ74932.1| flagellar basal-body rod protein FlgC [Vibrio cholerae NCTC 8457]
 gi|126521596|gb|EAZ78819.1| flagellar basal-body rod protein FlgC [Vibrio cholerae B33]
 gi|146317091|gb|ABQ21630.1| flagellar basal-body rod protein FlgC [Vibrio cholerae O395]
 gi|227010211|gb|ACP06423.1| flagellar basal-body rod protein FlgC [Vibrio cholerae M66-2]
 gi|227014095|gb|ACP10305.1| flagellar basal-body rod protein FlgC [Vibrio cholerae O395]
 gi|229343906|gb|EEO08881.1| flagellar basal-body rod protein FlgC [Vibrio cholerae RC9]
 gi|229352046|gb|EEO16987.1| flagellar basal-body rod protein FlgC [Vibrio cholerae B33]
 gi|229355229|gb|EEO20150.1| flagellar basal-body rod protein FlgC [Vibrio cholerae BX 330286]
 gi|229369883|gb|ACQ60306.1| flagellar basal-body rod protein FlgC [Vibrio cholerae MJ-1236]
 gi|254845033|gb|EET23447.1| flagellar basal-body rod protein FlgC [Vibrio cholerae MO10]
 gi|255735504|gb|EET90904.1| flagellar basal-body rod protein FlgC [Vibrio cholera CIRS 101]
 gi|262023840|gb|EEY42539.1| flagellar basal-body rod protein FlgC [Vibrio cholerae RC27]
 gi|262028665|gb|EEY47319.1| flagellar basal-body rod protein FlgC [Vibrio cholerae INDRE 91/1]
 gi|297541116|gb|EFH77170.1| flagellar basal-body rod protein FlgC [Vibrio cholerae MAK 757]
          Length = 138

 Score = 55.6 bits (132), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 24/43 (55%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++  SN N M EM  MI  ++ + +   + D +++ +L  ++
Sbjct: 93  GYIYKSNVNVMEEMANMISASRSYQTNVQVADASKQMLLRTLQ 135


>gi|294679035|ref|YP_003579650.1| flagellar basal-body rod protein FlgC [Rhodobacter capsulatus SB
          1003]
 gi|294477855|gb|ADE87243.1| flagellar basal-body rod protein FlgC [Rhodobacter capsulatus SB
          1003]
          Length = 131

 Score = 55.6 bits (132), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 24/56 (42%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
          ++ ++  +   A   RL  V++N++N DT G+    V+F E+              
Sbjct: 6  STLSVSASGLKAQSMRLRHVSENIANADTPGYHRKVVRFEELAAQKDGGATGVELG 61



 Score = 42.9 bits (99), Expect = 0.037,   Method: Composition-based stats.
 Identities = 7/47 (14%), Positives = 21/47 (44%), Gaps = 3/47 (6%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS---MLEAIRN 240
           G+ + SN + + E+       + + +   + D+  +    ++E +R 
Sbjct: 85  GYYDGSNVDLVVEIADARQAQRSYEANLRMFDQTRQMSSALMELLRR 131


>gi|306821564|ref|ZP_07455162.1| flagellar hook-associated protein FlgK [Eubacterium yurii subsp.
          margaretiae ATCC 43715]
 gi|304550309|gb|EFM38302.1| flagellar hook-associated protein FlgK [Eubacterium yurii subsp.
          margaretiae ATCC 43715]
          Length = 536

 Score = 55.6 bits (132), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 22/61 (36%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
          +  N   +   A ++ L T+  N++N +T G+   +   S        + +     V   
Sbjct: 20 SGLNAATSGLFAAQRVLDTIGHNIANQNTPGYTRQRANQSAASATSIENGNYLGMGVKMS 79

Query: 63 K 63
           
Sbjct: 80 S 80



 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 18/43 (41%)

Query: 200 EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           E S+ +   E+  M+     +N+   +I   ++ +   I  + 
Sbjct: 490 EVSSVSENEELTNMVKFQHAYNASARMITTVDEMIDVLINRMG 532


>gi|331269312|ref|YP_004395804.1| flagellar basal-body rod protein FlgC [Clostridium botulinum
           BKT015925]
 gi|329125862|gb|AEB75807.1| flagellar basal-body rod protein FlgC [Clostridium botulinum
           BKT015925]
          Length = 145

 Score = 55.3 bits (131), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 24/46 (52%), Gaps = 1/46 (2%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G++   N N + EM  MI  T+ + +  T I+ ++   ++A+  I 
Sbjct: 100 GYVLMPNVNILNEMADMIAATRAYEANVTAINSSKNMFMKAL-EIG 144



 Score = 39.5 bits (90), Expect = 0.45,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 20/49 (40%), Gaps = 8/49 (16%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV-G-------FRTIKVKFSE 43
          +S  I  +   A   R+ T++ N++N  T  G       +R     F E
Sbjct: 5  SSLRISASGLSAERLRMDTISSNITNFKTTRGKDGQKEPYRRKIAVFQE 53


>gi|312877567|ref|ZP_07737526.1| flagellar hook-associated protein FlgK [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|311795642|gb|EFR12012.1| flagellar hook-associated protein FlgK [Caldicellulosiruptor
           lactoaceticus 6A]
          Length = 522

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 21/192 (10%), Positives = 57/192 (29%), Gaps = 11/192 (5%)

Query: 51  DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTD 110
            I   ++ +    + L ++     + G  L+    G  +F     +     R  +     
Sbjct: 338 GIPYYLNRLNEFAQKLIEKFNELHTQGWSLNGQNTGINFFEPPVGQTFFYARYIKVSDAI 397

Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170
              L + +  Y V ++      +    ++ N     +  +    + ++       SQG  
Sbjct: 398 MNDLNNIATTYDVNNLPGGNDLVVDMLKLRNDTSIFKEGKFEDFLKSLISNLGVDSQG-- 455

Query: 171 RRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
                  + N      +  +      G       +   EM  +I     F +   +I+  
Sbjct: 456 ---AKNFAENQKVMVTQLDNRRQAVSG------VSIDEEMTNLIKYQHGFQASARMINAF 506

Query: 231 EKSMLEAIRNIA 242
           ++ +   +  + 
Sbjct: 507 DEMLDTIVNRLG 518



 Score = 43.3 bits (100), Expect = 0.031,   Method: Composition-based stats.
 Identities = 11/77 (14%), Positives = 21/77 (27%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
             I         + L   + N++N  T G+    +       + K         V  G 
Sbjct: 5  GLEIARTGIFVNRKGLEVTSHNVANASTPGYTRQVLNVKSNPPSSKVGFYSPKFQVGMGA 64

Query: 64 EYLSKEVGSFISTGTEL 80
          +  S E    +    + 
Sbjct: 65 DVQSLEQIRDMFLDMQY 81


>gi|241766918|ref|ZP_04764724.1| flagellar basal-body rod protein FlgC [Acidovorax delafieldii 2AN]
 gi|241362622|gb|EER58470.1| flagellar basal-body rod protein FlgC [Acidovorax delafieldii 2AN]
          Length = 134

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 15/96 (15%), Positives = 37/96 (38%), Gaps = 1/96 (1%)

Query: 144 EKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSN 203
             G+  +  +V+        D S G      S  +                 +G++  SN
Sbjct: 37  PDGQAYKARQVVFQTAPMGADSSAGVRVSAISENNTPGRRIHDPSHPSAD-AQGYVTHSN 95

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            N++ EM  MI  ++ + +   +++  +  +L+ ++
Sbjct: 96  VNAVDEMVNMISASRSYQNNVEVMNTAKSLLLKTLQ 131



 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 39/109 (35%), Gaps = 6/109 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQ 54
           M + F++  +A  A  QRL+ VA N++N D V       ++  +V F        +    
Sbjct: 3   MFSIFSVSGSAISAQSQRLNVVASNLANVDAVAGPDGQAYKARQVVFQTAPMGADSSAGV 62

Query: 55  KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103
           ++S ++       +       +     +    +     E    I  +R 
Sbjct: 63  RVSAISENNTPGRRIHDPSHPSADAQGYVTHSNVNAVDEMVNMISASRS 111


>gi|157362949|ref|YP_001469716.1| flagellar basal-body rod protein FlgC [Thermotoga lettingae TMO]
 gi|157313553|gb|ABV32652.1| flagellar basal-body rod protein FlgC [Thermotoga lettingae TMO]
          Length = 137

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 20/43 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N + EM  +I   + + +  +  +  +  +  A++
Sbjct: 91  GYVSLPNVNVLREMVDLISAQRSYEANISAFNTTKSMINSALQ 133



 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 29/78 (37%), Gaps = 6/78 (7%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDIDQKISF 58
           N+  +   A   R+  ++ N++N++T     G  +R     FSE + +        +  
Sbjct: 7  MNVSASGMTAQRLRVDIISSNIANSETTRTDRGTPYRRRVPVFSEYLISDGKSASTGVKV 66

Query: 59 VASGKEYLSKEVGSFIST 76
          V   ++     +    S 
Sbjct: 67 VRIEEDPSPFRLVYDPSH 84


>gi|146296278|ref|YP_001180049.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145409854|gb|ABP66858.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 146

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 20/43 (46%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
           + G++   N + + EM  MI  ++ + +  T ++  +  +   
Sbjct: 99  QNGYVNYPNVDIVTEMVNMIEASRAYEANVTAMNITKSMITRI 141



 Score = 54.1 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 6/49 (12%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43
          M  + NI  +A  A   R+  +A N++N +T     G  +R   V F E
Sbjct: 3  MFDAINISASALHAQRVRMDVIAQNIANANTTRTEDGTPYRRKIVVFEE 51


>gi|325274802|ref|ZP_08140830.1| flagellar basal body rod protein FlgC [Pseudomonas sp. TJI-51]
 gi|324100070|gb|EGB97888.1| flagellar basal body rod protein FlgC [Pseudomonas sp. TJI-51]
          Length = 87

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 32/73 (43%), Gaps = 6/73 (8%)

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
           +G V  +++  +   P  P  +      K G++   N N + EM  MI  ++ F +   L
Sbjct: 18  KGIVEDQSNLEARYEPNHPAAN------KDGYVYYPNVNVVEEMADMISASRAFQTNAEL 71

Query: 227 IDENEKSMLEAIR 239
           ++  +  M + + 
Sbjct: 72  MNTAKSMMQKVLT 84


>gi|85858815|ref|YP_461017.1| flagellar basal-body rod protein [Syntrophus aciditrophicus SB]
 gi|85721906|gb|ABC76849.1| flagellar basal-body rod protein [Syntrophus aciditrophicus SB]
          Length = 143

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 21/44 (47%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           ++G +   N N M EM  MI  ++ + +  T  D  +   L+ +
Sbjct: 96  QQGNVAMPNVNVMMEMTDMITASRAYEACVTAFDATKNMALKTL 139



 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 20/51 (39%), Gaps = 8/51 (15%)

Query: 1  MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSE 43
          M   TSF I  +   A   ++  +A N++N  T        ++     FS 
Sbjct: 1  MDFLTSFRICSSGFAAQRAKMDVIASNLANVSTTSTPEGGPYKRKVAIFSS 51


>gi|89072309|ref|ZP_01158888.1| putative flagellar hook-associated protein [Photobacterium sp.
          SKA34]
 gi|89051841|gb|EAR57293.1| putative flagellar hook-associated protein [Photobacterium sp.
          SKA34]
          Length = 144

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 23/67 (34%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
              NIGL    A +  L   A N++N +T GF   +   S + G         +   + 
Sbjct: 1  MNMINIGLTGLNANKTALDVTAHNVANVNTPGFSRQQAMMSALAGNNILSAGSGVEVASI 60

Query: 62 GKEYLSK 68
           +     
Sbjct: 61 RRISDQF 67


>gi|290474970|ref|YP_003467854.1| flagellar basal body rod cell-proximal protein [Xenorhabdus
           bovienii SS-2004]
 gi|289174287|emb|CBJ81077.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Xenorhabdus bovienii SS-2004]
          Length = 134

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N + + EM   I  ++ + +   +++  +  ML+ + 
Sbjct: 89  GYVRMPNVDVVGEMVNTISASRSYQANIEVLNTTKSIMLKTLT 131



 Score = 38.7 bits (88), Expect = 0.64,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 6/47 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42
           + F+I  +A  A  QRL+  A NM+N    VG     +R  +V F 
Sbjct: 4  LSIFDIASSALSAQSQRLNVSASNMANADSVVGPDGEPYRAKQVVFR 50


>gi|327441057|dbj|BAK17422.1| flagellar basal body rod protein [Solibacillus silvestris StLB046]
          Length = 154

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 24/42 (57%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G+++ SN + + EM  +I  ++ + +  T  + N+  + +A+
Sbjct: 108 GYVQMSNVDVLKEMVDLISASRSYEANITAFNANKNMLTKAL 149



 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 8/29 (27%), Positives = 14/29 (48%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTV 32
          S N   +A      R+  ++ N++N DT 
Sbjct: 6  SMNTTASALTTQRLRMDVISSNIANVDTT 34


>gi|301631992|ref|XP_002945075.1| PREDICTED: flagellar basal-body rod protein flgC-like [Xenopus
           (Silurana) tropicalis]
          Length = 134

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 29/64 (45%), Gaps = 6/64 (9%)

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
           G     P  P  D        G++  SN N++ EM  MI  ++ + +   +++  +  +L
Sbjct: 74  GRRVFDPGHPSADGE------GYVNHSNVNAVEEMVNMISASRSYQNNVEVMNTAKTLLL 127

Query: 236 EAIR 239
           + ++
Sbjct: 128 KTLQ 131



 Score = 39.9 bits (91), Expect = 0.31,   Method: Composition-based stats.
 Identities = 18/107 (16%), Positives = 37/107 (34%), Gaps = 6/107 (5%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKI 56
           + FN+  +A  A  QRL+ VA N++N D V       ++  +V F        +    ++
Sbjct: 5   SIFNVSGSAISAQSQRLNVVASNLANVDAVAGPDGQAYKARQVVFQTTPMGSDSAAGVRV 64

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103
             +   +    +       +     +    +     E    I  +R 
Sbjct: 65  RSIEESQVPGRRVFDPGHPSADGEGYVNHSNVNAVEEMVNMISASRS 111


>gi|260886628|ref|ZP_05897891.1| flagellar basal-body rod protein FlgB [Selenomonas sputigena ATCC
          35185]
 gi|260863771|gb|EEX78271.1| flagellar basal-body rod protein FlgB [Selenomonas sputigena ATCC
          35185]
          Length = 142

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 8/45 (17%), Positives = 20/45 (44%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46
            + ++      A   R   ++ N++N +T  F+   V F +++ 
Sbjct: 13 NRALDVMQRGMGAANLRQEVISHNIANVNTPNFKKSNVVFEDLLA 57


>gi|289670508|ref|ZP_06491583.1| flagellar basal body rod protein FlgF [Xanthomonas campestris pv.
          musacearum NCPPB4381]
          Length = 90

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 2/88 (2%)

Query: 9  LAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSK 68
          +    A  Q  STV+ N++N DTVGF+            I+              +   +
Sbjct: 1  MTGARASLQAQSTVSHNLANVDTVGFKAALANTEAF--KIQGKGYPSRIDALHVDQGFDR 58

Query: 69 EVGSFISTGTELDFALEGDAWFALESPR 96
            G    TG  LD +L+ D W A++SP 
Sbjct: 59 SQGHQKVTGNPLDVSLQQDRWLAVQSPD 86


>gi|218288292|ref|ZP_03492591.1| flagellar basal-body rod protein FlgC [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218241651|gb|EED08824.1| flagellar basal-body rod protein FlgC [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 144

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 22/42 (52%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++E SN N   +M  +I  T+ + +  T  D  ++  + A+
Sbjct: 99  GYVESSNVNLTTQMVDLIQATRAYQANATAFDAAKQMAVTAL 140



 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/95 (16%), Positives = 35/95 (36%), Gaps = 15/95 (15%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTI---------KVKFSEVVG 46
           TS +I  +   A +  L+ +A+N++N +T     G  +R            V F   +G
Sbjct: 4  NTSMDISASGLAANQLWLNVIANNIANVNTTRTPQGGPYRAEIVNFAPVENDVSFQTALG 63

Query: 47 AIKNDIDQKISFVASGKEYLSKEVGSFISTGTELD 81
               I   +   +  ++    ++    S    ++
Sbjct: 64 QAVQGIGGGVEVTSITQDTSPFQLIYDPSNPDAVN 98


>gi|126734103|ref|ZP_01749850.1| flagellar basal-body rod protein FlgC [Roseobacter sp. CCS2]
 gi|126716969|gb|EBA13833.1| flagellar basal-body rod protein FlgC [Roseobacter sp. CCS2]
          Length = 130

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 32/77 (41%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
          + ++  +   A   RL  V++N++NTDT G+R   + F E+V   +     +   +   +
Sbjct: 7  AISVATSGMKAQASRLRHVSENIANTDTPGYRRKAITFEELVTQGRTTGAVETGPLRLDQ 66

Query: 64 EYLSKEVGSFISTGTEL 80
            L +          + 
Sbjct: 67 TELKRVYDPSHPLADDT 83



 Score = 40.6 bits (93), Expect = 0.20,   Method: Composition-based stats.
 Identities = 8/45 (17%), Positives = 19/45 (42%), Gaps = 1/45 (2%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           G    SN N + E+       + + +   + D+  + M  A+ ++
Sbjct: 84  GHYNGSNVNLLIEIADAREAQRSYEANLKMFDQVRQ-MSSALNDL 127


>gi|224370168|ref|YP_002604332.1| FlgG1 [Desulfobacterium autotrophicum HRM2]
 gi|223692885|gb|ACN16168.1| FlgG1 [Desulfobacterium autotrophicum HRM2]
          Length = 117

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 16/43 (37%)

Query: 200 EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           E SN +   E    I   + F + T  I   ++ +   +  + 
Sbjct: 75  ELSNTDLAGEFTDQIITQRAFEANTRTIQTEDQMLGTLLDIVG 117



 Score = 39.5 bits (90), Expect = 0.39,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 19/39 (48%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39
          M  + N   +A  A   +++  A+N++N  +  F+  + 
Sbjct: 1  MGFAINTSASALKAFGTKMAVSANNVANVYSDDFKKSRA 39


>gi|329901228|ref|ZP_08272753.1| Flagellar basal-body rod protein FlgC [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327549160|gb|EGF33752.1| Flagellar basal-body rod protein FlgC [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 122

 Score = 55.3 bits (131), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N + EM  MI  ++ + +    ++  +  +L+ + 
Sbjct: 77  GYVSMPNVNVVEEMVNMISASRSYQTNVETMNAAKTLLLKTLT 119



 Score = 39.1 bits (89), Expect = 0.52,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 6/39 (15%)

Query: 12 QLALEQRLSTVADNMSNT----DTVG--FRTIKVKFSEV 44
            A  QRL+ VA N++N      T G  ++  +V FS V
Sbjct: 1  MSAQAQRLNVVASNIANADSTTSTNGQVYKAKQVVFSAV 39


>gi|323490140|ref|ZP_08095360.1| flagellar basal body rod protein FlgC [Planococcus donghaensis
           MPA1U2]
 gi|323396188|gb|EGA89014.1| flagellar basal body rod protein FlgC [Planococcus donghaensis
           MPA1U2]
          Length = 151

 Score = 55.3 bits (131), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 24/42 (57%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++  SN + + EM  ++  T+ + +  T ++ ++   ++A+
Sbjct: 106 GYVRMSNVDPLQEMVDLMSATRSYEANVTALNASKSMFMKAL 147



 Score = 42.5 bits (98), Expect = 0.052,   Method: Composition-based stats.
 Identities = 9/29 (31%), Positives = 15/29 (51%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTV 32
           FNI  +   A   R+  V+ N++N +T 
Sbjct: 6  GFNISSSGLTANRLRMDVVSANIANANTN 34


>gi|261856354|ref|YP_003263637.1| flagellar hook-associated protein FlgK [Halothiobacillus
           neapolitanus c2]
 gi|261836823|gb|ACX96590.1| flagellar hook-associated protein FlgK [Halothiobacillus
           neapolitanus c2]
          Length = 549

 Score = 55.3 bits (131), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 51/134 (38%), Gaps = 1/134 (0%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-QKISFV 59
           M    +  +   LA++Q L+T  +N++N +T G+   +V  + +    +N         V
Sbjct: 1   MPDLMSNSVTGLLAMQQALATTGNNIANANTPGYSRERVNLASMQAQYQNGSYIGSGVQV 60

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119
           AS      + + S ++  T  + +L     F  +  + +  T  G  + T      + + 
Sbjct: 61  ASVTRVYDQFITSQLNAATTTNSSLTFQNDFTTQVTQLLGDTSSGIAQQTQAFFNATQAI 120

Query: 120 KYPVLDMASVPIQI 133
                D  +    +
Sbjct: 121 AANPTDATARSTFL 134


>gi|114566383|ref|YP_753537.1| flagellar basal body rod protein [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
 gi|114337318|gb|ABI68166.1| flagellar basal body rod protein [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
          Length = 155

 Score = 55.3 bits (131), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 21/42 (50%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N N + EM  MI  T+ + +   +I+  +   + A+
Sbjct: 110 GYVNYPNVNIVEEMINMISATRAYEANAQVIEATKSIAMRAL 151



 Score = 46.0 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 20/49 (40%), Gaps = 7/49 (14%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDT------VG-FRTIKVKFSE 43
            S +   +   A   R+ T+A NM+N +T       G +R   V F  
Sbjct: 4  LNSIDTSASGLTAQRLRMDTIASNMANVETTRVDNRTGPYRRQVVVFEA 52


>gi|222530141|ref|YP_002574023.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor bescii
           DSM 6725]
 gi|222456988|gb|ACM61250.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor bescii
           DSM 6725]
          Length = 145

 Score = 55.3 bits (131), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 20/43 (46%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
           + G++   N + + EM  MI  ++ + +  T ++  +  +   
Sbjct: 98  QNGYVNYPNVDIVTEMVNMIEASRSYEANVTALNITKSMITRT 140



 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 6/49 (12%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43
          M  + NI  +A  A   R+  +A N++N +T     G  +R   V F E
Sbjct: 1  MFDAINISSSALSAQRVRMDVIAQNIANANTTRTENGQPYRRKVVVFEE 49


>gi|121533765|ref|ZP_01665592.1| flagellar basal-body rod protein FlgC [Thermosinus carboxydivorans
           Nor1]
 gi|121307756|gb|EAX48671.1| flagellar basal-body rod protein FlgC [Thermosinus carboxydivorans
           Nor1]
          Length = 143

 Score = 55.3 bits (131), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 21/44 (47%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
             G++   N N + EM  M+   + + +  T I+  +   L+A+
Sbjct: 96  AAGYVAMPNVNIIAEMVDMMTAARAYEANVTAINAAKSMALKAL 139



 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 12/112 (10%), Positives = 34/112 (30%), Gaps = 16/112 (14%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKV---------KFSEVVGAI 48
           + +   +   A   R+  +++N++N +T     G  +R   V          F++++   
Sbjct: 6   AIDAAASGMTAERLRMDVISNNIANANTTRTPEGGPYRRQMVIFQPRAGQNSFADLLSGK 65

Query: 49  KNDIDQKISF-VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
             ++  ++   V     +      +          A+      A        
Sbjct: 66  VENVGVRVVGIVKDEAPFRQVFDPNHPDANAAGYVAMPNVNIIAEMVDMMTA 117


>gi|294084412|ref|YP_003551170.1| flgK flagellar hook-associated protein 1 [Candidatus
          Puniceispirillum marinum IMCC1322]
 gi|292663985|gb|ADE39086.1| FlgK flagellar hook-associated protein 1 [Candidatus
          Puniceispirillum marinum IMCC1322]
          Length = 1402

 Score = 55.3 bits (131), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 26/50 (52%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50
          M + F+IG +   +  Q L+    N++N +T G++  +    E+ G+  +
Sbjct: 1  MASLFDIGKSGLSSYRQALAVTGQNIANINTDGYKRREANLEEIQGSTGS 50



 Score = 41.8 bits (96), Expect = 0.088,   Method: Composition-based stats.
 Identities = 24/165 (14%), Positives = 50/165 (30%), Gaps = 13/165 (7%)

Query: 84   LEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVG 143
            + G   F        + TR             SA G    L               ++  
Sbjct: 1244 INGIVDFVDTETGTTMATRTLDAYKEA-----SAKGFAVKLSGELEIEDKFHIATNYDGV 1298

Query: 144  EKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP---NIPPTPLEDLSGVTVKRGFLE 200
              G   +    + T     +D+  GF     S ++    ++  + L   +  T++   LE
Sbjct: 1299 GDGRNLKAIIDLQTPNDEELDIG-GFQEVFGSMVAELGSSVRTSKLTLEAAQTLRDASLE 1357

Query: 201  D----SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
                 S  N   E  ++I   Q + +   ++    +     +++I
Sbjct: 1358 AEASYSGVNLDTEASRLIEQQQAYQASARILSTARELFQTLMQSI 1402


>gi|259907632|ref|YP_002647988.1| Flagellar basal-body rod protein, FlgC [Erwinia pyrifoliae Ep1/96]
 gi|224963254|emb|CAX54738.1| Flagellar basal-body rod protein, FlgC [Erwinia pyrifoliae Ep1/96]
 gi|283477474|emb|CAY73390.1| Flagellar basal-body rod protein flgC [Erwinia pyrifoliae DSM
           12163]
 gi|310764862|gb|ADP09812.1| Flagellar basal-body rod protein, FlgC [Erwinia sp. Ejp617]
          Length = 134

 Score = 55.3 bits (131), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 11/92 (11%), Positives = 34/92 (36%)

Query: 148 ISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSM 207
              + + +      +     G V+      S        E  + +  ++G++   N N +
Sbjct: 40  QPYRARQVTFEVDAAAGNEIGGVKVGEVVESSAPDRLVYEPGNPLADQQGYVRMPNVNVV 99

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            EM   +  ++ + +   +++  +  ML+ + 
Sbjct: 100 DEMVNTLSASRSYQANVEVMNSAKAMMLKTLS 131


>gi|226944490|ref|YP_002799563.1| flagellar basal-body rod protein [Azotobacter vinelandii DJ]
 gi|226719417|gb|ACO78588.1| flagellar basal-body rod protein [Azotobacter vinelandii DJ]
          Length = 135

 Score = 54.9 bits (130), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 24/43 (55%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N   ++EM  MI  ++ + +   +++ +++ +L+ + 
Sbjct: 89  GYVSLPNVEPVHEMVNMIAASRSYQANVEVMNTSKQMLLKTLT 131



 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 33/81 (40%), Gaps = 6/81 (7%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQ 54
          M   F+I  +A  A  QR++  A N++N D+VG      +R  +V F  +     +    
Sbjct: 3  MFNIFDIAGSALSAQSQRMNVTASNLANVDSVGSEDGQAYRAKQVLFESMARGRSDTGGV 62

Query: 55 KISFVASGKEYLSKEVGSFIS 75
          ++  V      L +E      
Sbjct: 63 RVVQVVEDPSPLRQEYRPEHP 83


>gi|299536009|ref|ZP_07049328.1| flagellar hook-associated protein FlgK [Lysinibacillus fusiformis
           ZC1]
 gi|298728614|gb|EFI69170.1| flagellar hook-associated protein FlgK [Lysinibacillus fusiformis
           ZC1]
          Length = 555

 Score = 54.9 bits (130), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 20/41 (48%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S+ +   EM  MI   Q +N+   +I   ++++ + I  + 
Sbjct: 511 SSVSLDEEMTNMITFQQAYNANARMITVVDETLDKIINGMG 551



 Score = 42.2 bits (97), Expect = 0.063,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 27/79 (34%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
               +  L T   N+SN +T+G+   +V      G     ++Q I     G    +  +
Sbjct: 14 GLFTQQTALYTTGHNISNANTLGYSRQRVNMQATPGFPTAGLNQPIYPGHLGTGVEAGSI 73

Query: 71 GSFISTGTELDFALEGDAW 89
                  +  +  E + +
Sbjct: 74 QRIRDEFIDRQYRQETNKF 92


>gi|242238967|ref|YP_002987148.1| flagellar basal-body rod protein FlgC [Dickeya dadantii Ech703]
 gi|242131024|gb|ACS85326.1| flagellar basal-body rod protein FlgC [Dickeya dadantii Ech703]
          Length = 134

 Score = 54.9 bits (130), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 8/61 (13%), Positives = 26/61 (42%)

Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           P+      +  + +  +RG++   N +   EM   I  ++ + +   +++  +  M + +
Sbjct: 71  PSPDKLVYQPGNPLADQRGYVRMPNVDVAAEMVNSISASRSYQANVEVLNTAKTLMQKTL 130

Query: 239 R 239
            
Sbjct: 131 T 131



 Score = 36.8 bits (83), Expect = 2.7,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 6/42 (14%)

Query: 7  IGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42
          I  +A  A  QR++  A N++N     G     +R  +V F 
Sbjct: 9  ISGSALTAQSQRMNVSASNLANADSVTGPDGQPYRAKQVVFK 50


>gi|37525839|ref|NP_929183.1| flagellar basal body rod protein FlgC [Photorhabdus luminescens
           subsp. laumondii TTO1]
 gi|36785268|emb|CAE14209.1| Flagellar basal-body rod protein FlgC (Putative proximal rod
           protein) [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 134

 Score = 54.9 bits (130), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N + + EM   I  ++ + +   +++  +  ML+ + 
Sbjct: 89  GYVRMPNVDVVGEMINTISASRSYQANVEVLNTTKSMMLKTLT 131



 Score = 39.5 bits (90), Expect = 0.47,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 31/80 (38%), Gaps = 6/80 (7%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQK 55
           + F+I  +A  A  QRL+  A NM+N D+V       +R  +V F     A +     +
Sbjct: 4  LSIFDIAGSALSAQSQRLNVSASNMANADSVAGPDGQPYRAKQVVFRVAAPAGQETGGVR 63

Query: 56 ISFVASGKEYLSKEVGSFIS 75
          +S +         E      
Sbjct: 64 VSEIVDDPTPFRLEYQPGHP 83


>gi|222053600|ref|YP_002535962.1| flagellar basal-body rod protein FlgC [Geobacter sp. FRC-32]
 gi|221562889|gb|ACM18861.1| flagellar basal-body rod protein FlgC [Geobacter sp. FRC-32]
          Length = 146

 Score = 54.9 bits (130), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 27/75 (36%), Gaps = 4/75 (5%)

Query: 168 GFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
           G V+       P +   P    +      G++   N N + EM  MI  T+ + +  T  
Sbjct: 75  GVVQITEDQTPPRLQYDPTHPDADAK---GYVALPNVNVVEEMADMIAATRTYEANVTAA 131

Query: 228 DENEKSMLEAIRNIA 242
              +   L+ +  + 
Sbjct: 132 QAAKSMALKTL-ELG 145



 Score = 42.2 bits (97), Expect = 0.067,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 23/51 (45%), Gaps = 8/51 (15%)

Query: 1  MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43
          M   TS +I  +A  A   R++ ++ N++N  +     G  ++     F+ 
Sbjct: 1  MDFFTSMDISASALTAERTRMNLISSNLANAGSTRTAEGGPYKRKDAVFAA 51


>gi|291613036|ref|YP_003523193.1| flagellar basal-body rod protein FlgC [Sideroxydans lithotrophicus
           ES-1]
 gi|291583148|gb|ADE10806.1| flagellar basal-body rod protein FlgC [Sideroxydans lithotrophicus
           ES-1]
          Length = 134

 Score = 54.9 bits (130), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 7/44 (15%), Positives = 23/44 (52%)

Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +G++   N N + EM  MI  ++ + +   +++ ++  + + + 
Sbjct: 88  QGYVTMPNVNPVDEMVNMISASRSYQNNVDVLNTSKTLLTKTLT 131



 Score = 46.0 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 42/120 (35%), Gaps = 6/120 (5%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDT-VG-----FRTIKVKFSEVVGAIKNDIDQKI 56
             FNI  +A  A  QRL+ VA N++N D+  G     ++  +V FS V    +     K+
Sbjct: 5   NIFNIAGSAMTAQSQRLNVVASNLANVDSATGPDGKPYKAKQVVFSTVPITGQVGEGVKV 64

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVS 116
           + V      +               +    +     E    I  +R  +  V    +  +
Sbjct: 65  AAVVEDNSPMKTVYDPKNPLADGQGYVTMPNVNPVDEMVNMISASRSYQNNVDVLNTSKT 124


>gi|312621566|ref|YP_004023179.1| flagellar basal-body rod protein flgc [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312202033|gb|ADQ45360.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 145

 Score = 54.9 bits (130), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 20/43 (46%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
           + G++   N + + EM  MI  ++ + +  T ++  +  +   
Sbjct: 98  QNGYVNYPNVDIVTEMVNMIEASRSYEANVTALNITKSMITRT 140



 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 6/49 (12%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43
          M  + NI  +A  A   R+  +A N++N +T     G  +R   V F E
Sbjct: 1  MFDAINISSSALSAQRVRMDVIAQNIANANTTRTENGQPYRRKVVVFEE 49


>gi|302872573|ref|YP_003841209.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor
           obsidiansis OB47]
 gi|302575432|gb|ADL43223.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor
           obsidiansis OB47]
          Length = 145

 Score = 54.9 bits (130), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 20/43 (46%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
           + G++   N + + EM  MI  ++ + +  T ++  +  +   
Sbjct: 98  QNGYVNYPNVDIVTEMVNMIEASRSYEANVTALNITKSMITRT 140



 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 6/49 (12%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43
          M  + NI  +A  A   R+  +A N++N +T     G  +R   V F E
Sbjct: 1  MFDAINISSSALTAQRVRMDVIAQNIANANTTRTESGQPYRRKIVVFEE 49


>gi|326319095|ref|YP_004236767.1| flagellar basal-body rod protein FlgC [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|323375931|gb|ADX48200.1| flagellar basal-body rod protein FlgC [Acidovorax avenae subsp.
           avenae ATCC 19860]
          Length = 134

 Score = 54.9 bits (130), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 24/43 (55%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++  SN N + EM  MI  ++ + +   +++  +  +L+ ++
Sbjct: 89  GYVTHSNVNPVEEMVNMISASRSYQNNVEVLNTTKSLLLKTLQ 131



 Score = 41.8 bits (96), Expect = 0.085,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 39/109 (35%), Gaps = 6/109 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQ 54
           M + F +  +A  A  QRL+ VA N++N D V       ++  +V F       +     
Sbjct: 3   MFSIFGVSGSAISAQAQRLNVVASNLANVDAVAGPDGQAYKARQVVFQTAPMGDEGAAGV 62

Query: 55  KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103
           ++S ++  +    + +           +    +     E    I  +R 
Sbjct: 63  RVSAISESQAPGKRVLDPTHPQADAEGYVTHSNVNPVEEMVNMISASRS 111


>gi|269836584|ref|YP_003318812.1| flagellar basal-body rod protein FlgC [Sphaerobacter thermophilus
          DSM 20745]
 gi|269785847|gb|ACZ37990.1| flagellar basal-body rod protein FlgC [Sphaerobacter thermophilus
          DSM 20745]
          Length = 154

 Score = 54.9 bits (130), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 28/84 (33%), Gaps = 6/84 (7%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDIDQKISF 58
            + ++   A   R+  +A N++N DT     G  +R  +V F+ V              
Sbjct: 7  MRVSMSGLTAQRLRMDVIASNIANVDTTRTPEGGPYRRRQVVFTAVPATDSRPSAGGFQR 66

Query: 59 VASGKEYLSKEVGSFISTGTELDF 82
          V +  +  S        T    D 
Sbjct: 67 VLAPVDPQSNAGQGVAVTAIRTDP 90



 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 6/43 (13%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           GF+   + + + EM  ++  ++ + +  T+++  +     A+ 
Sbjct: 108 GFVLRPDIDVITEMTDLLAASRAYEANVTVLNAVKAMASRALT 150


>gi|323703166|ref|ZP_08114819.1| flagellar basal-body rod protein FlgB [Desulfotomaculum
          nigrificans DSM 574]
 gi|323531825|gb|EGB21711.1| flagellar basal-body rod protein FlgB [Desulfotomaculum
          nigrificans DSM 574]
          Length = 132

 Score = 54.9 bits (130), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 20/50 (40%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
             A   R   +A+N++N +T GF+   V F E + A        +    
Sbjct: 15 GLDASALRQRVIANNVANLNTPGFKKSYVSFEEQLKAAMESGGGPLKGTH 64


>gi|120613057|ref|YP_972735.1| flagellar basal-body rod protein FlgC [Acidovorax citrulli AAC00-1]
 gi|120591521|gb|ABM34961.1| flagellar basal-body rod protein FlgC [Acidovorax citrulli AAC00-1]
          Length = 134

 Score = 54.9 bits (130), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 24/43 (55%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++  SN N + EM  MI  ++ + +   +++  +  +L+ ++
Sbjct: 89  GYVTHSNVNPVEEMVNMISASRSYQNNVEVLNTTKSLLLKTLQ 131



 Score = 41.8 bits (96), Expect = 0.096,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 39/109 (35%), Gaps = 6/109 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQ 54
           M + F +  +A  A  QRL+ VA N++N D V       ++  +V F       +     
Sbjct: 3   MFSIFGVSGSAISAQAQRLNVVASNLANVDAVAGPDGQAYKARQVVFQTAPMGGEGAAGV 62

Query: 55  KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103
           ++S ++  +    + +           +    +     E    I  +R 
Sbjct: 63  RVSAISESQAPGKRVLDPTHPQADAEGYVTHSNVNPVEEMVNMISASRS 111


>gi|292489135|ref|YP_003532022.1| flagellar basal-body rod protein FlgC [Erwinia amylovora CFBP1430]
 gi|292900254|ref|YP_003539623.1| flagellar basal-body rod protein [Erwinia amylovora ATCC 49946]
 gi|291200102|emb|CBJ47228.1| flagellar basal-body rod protein [Erwinia amylovora ATCC 49946]
 gi|291554569|emb|CBA22184.1| Flagellar basal-body rod protein flgC [Erwinia amylovora CFBP1430]
 gi|312173293|emb|CBX81548.1| Flagellar basal-body rod protein flgC [Erwinia amylovora ATCC
           BAA-2158]
          Length = 134

 Score = 54.9 bits (130), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 11/92 (11%), Positives = 34/92 (36%)

Query: 148 ISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSM 207
              + + +      +     G V+      S        E  + +  ++G++   N N +
Sbjct: 40  QPYRARQVTFEVDAAAGNEIGGVKVGEVVESSAPDRLVYEPGNPLADQQGYVRMPNVNVV 99

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            EM   +  ++ + +   +++  +  ML+ + 
Sbjct: 100 DEMVNTLSASRSYQANVEVMNSAKAMMLKTLS 131


>gi|238796902|ref|ZP_04640406.1| Flagellar basal-body rod protein flgC [Yersinia mollaretii ATCC
           43969]
 gi|238719162|gb|EEQ10974.1| Flagellar basal-body rod protein flgC [Yersinia mollaretii ATCC
           43969]
          Length = 121

 Score = 54.9 bits (130), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N + EM   I  ++ + +   +++  +  ML+ + 
Sbjct: 76  GYVRMPNVNVVSEMVNTISASRSYQANVEVMNTAKSMMLKTLT 118


>gi|223038370|ref|ZP_03608664.1| flagellar basal-body rod protein FlgG (Distal rod protein)
           [Campylobacter rectus RM3267]
 gi|222880227|gb|EEF15314.1| flagellar basal-body rod protein FlgG (Distal rod protein)
           [Campylobacter rectus RM3267]
          Length = 41

 Score = 54.9 bits (130), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 6/39 (15%), Positives = 19/39 (48%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            SN +    + Q+I + + F + +  I  +++ +   ++
Sbjct: 1   MSNVDLSRSLTQLIVVQRGFQANSKTITTSDEMLNTLLQ 39


>gi|110677659|ref|YP_680666.1| flagellar basal body rod protein FlgC [Roseobacter denitrificans
          OCh 114]
 gi|163733139|ref|ZP_02140583.1| flagellar basal-body rod protein FlgC [Roseobacter litoralis Och
          149]
 gi|109453775|gb|ABG29980.1| flagellar basal-body rod protein FlgC [Roseobacter denitrificans
          OCh 114]
 gi|161393674|gb|EDQ17999.1| flagellar basal-body rod protein FlgC [Roseobacter litoralis Och
          149]
          Length = 129

 Score = 54.9 bits (130), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 25/80 (31%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
           S ++  +   A   RL  +++N+SN DT G+R   V F    G       +        
Sbjct: 6  KSLDVTTSGLKAQATRLRHLSENISNADTPGYRRKLVSFETAFGGQGVSTVETSRVRLDQ 65

Query: 63 KEYLSKEVGSFISTGTELDF 82
                   S         F
Sbjct: 66 STLERVYDPSHPMADESGYF 85



 Score = 43.3 bits (100), Expect = 0.033,   Method: Composition-based stats.
 Identities = 7/48 (14%), Positives = 21/48 (43%), Gaps = 3/48 (6%)

Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS---MLEAIRN 240
            G+ + SN + + E+       + + +   + ++  K    ++E +R 
Sbjct: 82  SGYFDGSNVDLLIELSDAREAQRSYEANLKVFEQTRKMSSSLMELLRK 129


>gi|83647167|ref|YP_435602.1| flagellar hook-associated protein [Hahella chejuensis KCTC 2396]
 gi|83635210|gb|ABC31177.1| Flagellar hook-associated protein [Hahella chejuensis KCTC 2396]
          Length = 892

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 22/50 (44%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
             NIGL    A +  L+T  +N+SN +T G+   +V+F           
Sbjct: 4  NVINIGLTGLKASQTALATTGNNVSNANTEGYSRQRVEFEATPSQFIGAG 53


>gi|332525068|ref|ZP_08401248.1| flagellar basal-body rod protein FlgC [Rubrivivax benzoatilyticus
           JA2]
 gi|332108357|gb|EGJ09581.1| flagellar basal-body rod protein FlgC [Rubrivivax benzoatilyticus
           JA2]
          Length = 139

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 24/43 (55%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++  SN N++ EM  MI  ++ + +   +++  +  + + ++
Sbjct: 93  GYVTFSNVNAVQEMVDMISASRSYQNNVEVMNTAKTLLQKTLQ 135



 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 6/60 (10%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQ 54
          M   F++  +A  A  QRL+ VA N++N DTV       ++  +V F   +     D   
Sbjct: 3  MFRIFDVSGSAVSAQSQRLNVVASNLANADTVAGPDGQAYKARQVVFQTALMDAGADPAS 62


>gi|170694390|ref|ZP_02885544.1| flagellar basal-body rod protein FlgC [Burkholderia graminis C4D1M]
 gi|170140813|gb|EDT08987.1| flagellar basal-body rod protein FlgC [Burkholderia graminis C4D1M]
          Length = 127

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 25/61 (40%)

Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           P    T  +  +      G++   N + + EM  MI  ++ + +    ++  +  ML+ +
Sbjct: 64  PTPMKTAYDPGNPAANADGYVTLPNVDPVQEMVNMISASRSYQANVETLNTAKTLMLKTL 123

Query: 239 R 239
            
Sbjct: 124 T 124



 Score = 37.9 bits (86), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 6/36 (16%)

Query: 12 QLALEQRLSTVADNMSNT-DTVG-----FRTIKVKF 41
            A  QRL+  A N++N   T G     ++  +V F
Sbjct: 1  MSAQSQRLNVTASNLANADSTTGPDGQPYKAKQVVF 36


>gi|160939632|ref|ZP_02086980.1| hypothetical protein CLOBOL_04524 [Clostridium bolteae ATCC
          BAA-613]
 gi|158437423|gb|EDP15187.1| hypothetical protein CLOBOL_04524 [Clostridium bolteae ATCC
          BAA-613]
          Length = 118

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 9/58 (15%), Positives = 23/58 (39%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFV 59
            +          +  +    + N++N +T G++  KV+F +V+       ++    V
Sbjct: 6  DRALGALERGMDGMWLKQQIASHNIANVETPGYKAKKVEFRDVLYETAQGTERISKPV 63


>gi|149912830|ref|ZP_01901364.1| flagellar basal-body rod protein FlgC [Roseobacter sp. AzwK-3b]
 gi|149813236|gb|EDM73062.1| flagellar basal-body rod protein FlgC [Roseobacter sp. AzwK-3b]
          Length = 130

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/40 (35%), Positives = 22/40 (55%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
          S ++  +   A  QRL  V++N++N DT G+R   V F  
Sbjct: 7  SLSVSASGLKAQAQRLRHVSENIANADTPGYRRKTVSFEA 46



 Score = 39.5 bits (90), Expect = 0.42,   Method: Composition-based stats.
 Identities = 4/33 (12%), Positives = 12/33 (36%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
            SN   + E+       + + +   + D+  + 
Sbjct: 88  SSNVQLVIEIADAREAQRSYEANLKMFDQARQM 120


>gi|187478183|ref|YP_786207.1| flagellar basal body rod protein FlgC [Bordetella avium 197N]
 gi|115422769|emb|CAJ49297.1| flagellar basal-body rod protein [Bordetella avium 197N]
          Length = 139

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 6/45 (13%), Positives = 21/45 (46%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +G++   N + + E   MI  ++ + +   +++  ++ M   + 
Sbjct: 91  AQGYVAMPNVDPVAETVNMIAASRSYQANIEVLNTAKQLMQRTLT 135



 Score = 36.0 bits (81), Expect = 4.2,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 7/60 (11%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKISFVA 60
          I  +A  A  QRL+  A N++N D+V       +R  +V F  +  A+     Q+I  V 
Sbjct: 9  ISGSALAAQSQRLNVAASNLANADSVAGPDGQPYRARQVVFQ-MNPALGQAAGQEIGGVK 67


>gi|83589620|ref|YP_429629.1| flagellar basal-body rod protein FlgB [Moorella thermoacetica
          ATCC 39073]
 gi|83572534|gb|ABC19086.1| flagellar basal-body rod protein FlgB [Moorella thermoacetica
          ATCC 39073]
          Length = 132

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 12/83 (14%), Positives = 26/83 (31%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
            +   A      R  T+A N++N +T GF+  +V F + +            +  +   
Sbjct: 7  MYVLEKALDTATLRQRTIAHNIANVNTPGFKRYQVSFEDQLSRALGLEPGLPLYRTNPYH 66

Query: 65 YLSKEVGSFISTGTELDFALEGD 87
               +        +    +  D
Sbjct: 67 LPPSGLELAPQVSRDTSTTMRQD 89


>gi|289523577|ref|ZP_06440431.1| flagellar basal-body rod protein FlgB [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
 gi|289503269|gb|EFD24433.1| flagellar basal-body rod protein FlgB [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
          Length = 135

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/122 (16%), Positives = 41/122 (33%), Gaps = 12/122 (9%)

Query: 11  AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
               L +R   ++ N++NT+T G+   +V F + +    +   +    +A+  E     +
Sbjct: 12  GMKGLSKRFEAISQNVANTNTPGYARSEVTFEDELREALSVSKRPKLPLATTHEAHITNL 71

Query: 71  GSFISTGTELDFALEG------------DAWFALESPRGIILTRDGRFKVTDDGSLVSAS 118
              I   T  +  + G            D   +  +   +  T          GS  +A 
Sbjct: 72  PRDIKGITPKEHRVVGELARWDGNGVDLDIEMSKLAQARMTYTALASLMSKRVGSYKTAI 131

Query: 119 GK 120
           G 
Sbjct: 132 GG 133


>gi|169826733|ref|YP_001696891.1| flagellar hook-associated protein FlgK [Lysinibacillus sphaericus
           C3-41]
 gi|168991221|gb|ACA38761.1| Flagellar hook-associated protein 1 (HAP1) [Lysinibacillus
           sphaericus C3-41]
          Length = 530

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 19/41 (46%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  +   EM  MI   Q +N+   +I   ++++ + I  + 
Sbjct: 486 SAVSLDEEMTNMITFQQAYNANARMITVVDETLDKIINGMG 526



 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 24/72 (33%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
               +  L T   N+SN +T+G+   +V      G     ++Q       G    +  +
Sbjct: 14 GLFVQQTALYTTGHNISNANTLGYSRQRVNMQATPGFPTAGLNQPTYPGHLGTGVEAGSI 73

Query: 71 GSFISTGTELDF 82
              S   +  +
Sbjct: 74 QRIRSEFIDRQY 85


>gi|237653577|ref|YP_002889891.1| flagellar hook-associated protein FlgK [Thauera sp. MZ1T]
 gi|237624824|gb|ACR01514.1| flagellar hook-associated protein FlgK [Thauera sp. MZ1T]
          Length = 660

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/196 (13%), Positives = 51/196 (26%), Gaps = 3/196 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M +  NIGL    A +  L+T + N++N  T GF    V                     
Sbjct: 1   MASLLNIGLTGLSASQAYLNTTSHNIANAATPGFHRQTVTQEARDPQYSGGAFFGTGTGV 60

Query: 61  S---GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSA 117
           +          E     +     ++A        L++      T          G+L + 
Sbjct: 61  TGVARSYSQLLEGQVLSADSRRAEYAAYSQFISQLDNVLADADTGLTPALNEFFGALQNV 120

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177
           +     +      +              G IS+  + + T    +++   G+        
Sbjct: 121 TSNPTNVAARQALLSSGDTLSARFRTLDGRISEIAEGVETEMRSTLESINGYAAAIAELN 180

Query: 178 SPNIPPTPLEDLSGVT 193
              +        S   
Sbjct: 181 ERMVISRTGGAGSAAN 196


>gi|157371209|ref|YP_001479198.1| flagellar basal body rod protein FlgC [Serratia proteamaculans 568]
 gi|157322973|gb|ABV42070.1| flagellar basal-body rod protein FlgC [Serratia proteamaculans 568]
          Length = 134

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 6/43 (13%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N + + EM   I  ++ + +   +++  +  M++ + 
Sbjct: 89  GYVRMPNVDVVGEMVNTISASRSYQANVEVLNTTKSMMMKTLT 131



 Score = 35.6 bits (80), Expect = 5.5,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 6/47 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFS 42
             F+I  +A  A  QRL+  A NM+N D+V       +R  +V F 
Sbjct: 4  LNIFDISGSALSAQSQRLNVSASNMANADSVSGPDGQPYRAKQVVFE 50


>gi|148266225|ref|YP_001232931.1| flagellar basal-body rod protein FlgC [Geobacter uraniireducens
           Rf4]
 gi|146399725|gb|ABQ28358.1| flagellar basal-body rod protein FlgC [Geobacter uraniireducens
           Rf4]
          Length = 146

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 30/80 (37%), Gaps = 3/80 (3%)

Query: 159 GLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
           G   V    G V+       P +   P    +    ++G++   N N + EM  MI  T+
Sbjct: 66  GNRGVPQQVGVVQINEDQNPPRLQYDPTHPDAN---QQGYVALPNVNVVEEMADMIAATR 122

Query: 219 KFNSITTLIDENEKSMLEAI 238
            + +  T     +   ++ +
Sbjct: 123 TYEANVTAAQAAKSMAMKTL 142



 Score = 38.3 bits (87), Expect = 0.85,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 38/107 (35%), Gaps = 13/107 (12%)

Query: 1   MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFS-----EVVGA 47
           M   TS +I  +A  A   R++ ++ N++N ++     G  +R     FS     E   +
Sbjct: 1   MDFFTSMDISSSALTAERTRMNLISSNLANANSTRTAEGGPYRRKDAVFSARPVAESFSS 60

Query: 48  IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES 94
           + +    +      G   ++++                   + AL +
Sbjct: 61  VFSKTGNRGVPQQVGVVQINEDQNPPRLQYDPTHPDANQQGYVALPN 107


>gi|308050374|ref|YP_003913940.1| flagellar basal-body rod protein FlgC [Ferrimonas balearica DSM
           9799]
 gi|307632564|gb|ADN76866.1| flagellar basal-body rod protein FlgC [Ferrimonas balearica DSM
           9799]
          Length = 139

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 8/45 (17%), Positives = 20/45 (44%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           + G++   N N + EM  MI  ++ + +   +    +    + +R
Sbjct: 91  QEGYIYKPNVNVVEEMANMISASRSYQANVQVASAAKDMAQQTLR 135



 Score = 43.3 bits (100), Expect = 0.026,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 24/62 (38%), Gaps = 6/62 (9%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56
            F+   +   A   RL+T A N++N ++V       +R  +  F   +       +Q +
Sbjct: 5  KIFDTAGSGMSAQSVRLNTTASNIANANSVSSSAGETYRARQPIFEAALQQASGYQNQSV 64

Query: 57 SF 58
            
Sbjct: 65 PV 66


>gi|224418356|ref|ZP_03656362.1| hypothetical protein HcanM9_03665 [Helicobacter canadensis MIT
          98-5491]
          Length = 36

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 18/36 (50%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRT 36
          M  S   G++     +  +   ++N++N +T GFR 
Sbjct: 1  MVGSLYSGISGIKTHQTGIDVTSNNIANVNTTGFRA 36


>gi|312962289|ref|ZP_07776780.1| flagellar hook-associated protein FlgK [Pseudomonas fluorescens
          WH6]
 gi|311283216|gb|EFQ61806.1| flagellar hook-associated protein FlgK [Pseudomonas fluorescens
          WH6]
          Length = 678

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 10/51 (19%), Positives = 24/51 (47%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
           +  NIG++   A +  LS +++N++N +T G+   +   +         +
Sbjct: 1  MSLLNIGMSGLNAAQGSLSVLSNNIANVNTPGYSRQQTTQNAGASNPYGGV 51



 Score = 36.0 bits (81), Expect = 4.5,   Method: Composition-based stats.
 Identities = 14/89 (15%), Positives = 30/89 (33%), Gaps = 9/89 (10%)

Query: 162 SVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSN---------ANSMYEMGQ 212
           +VD + G      +    +   +     +  +   G L  +N          N   E G 
Sbjct: 590 AVDGNAGVSLVSANSRLVSQVGSKAAQANTDSTATGALLAANKAASNSVSQVNLDEEAGD 649

Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           MI   Q + + + +I   +++    I  +
Sbjct: 650 MIKFQQYYTASSQIIKAAQETFSTLINAL 678


>gi|294635608|ref|ZP_06714085.1| flagellar basal-body rod protein FlgC [Edwardsiella tarda ATCC
           23685]
 gi|291091060|gb|EFE23621.1| flagellar basal-body rod protein FlgC [Edwardsiella tarda ATCC
           23685]
          Length = 134

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 6/43 (13%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N + + EM   I  ++ + +   +++  +  M++ + 
Sbjct: 89  GYVRMPNVDVVGEMVNSIAASRSYQANVEVLNTTKSLMMKTLT 131



 Score = 39.1 bits (89), Expect = 0.59,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 6/47 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42
           + F+I  +A  A  +R++  A N++N     G     +R  +V F 
Sbjct: 4  LSIFDISGSALTAQSKRMNVAASNLANADSVTGPDGEPYRAKQVVFQ 50


>gi|126652479|ref|ZP_01724651.1| flagellar hook-associated protein K [Bacillus sp. B14905]
 gi|126590750|gb|EAZ84865.1| flagellar hook-associated protein K [Bacillus sp. B14905]
          Length = 530

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 19/41 (46%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  +   EM  MI   Q +N+   +I   ++++ + I  + 
Sbjct: 486 SAVSLDEEMTNMITFQQAYNANARMITVVDETLDKIINGMG 526



 Score = 41.8 bits (96), Expect = 0.080,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 24/72 (33%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
               +  L T   N+SN +T+G+   +V      G     ++Q       G    +  +
Sbjct: 14 GLFVQQTALYTTGHNISNANTLGYSRQRVNMQATPGFPTAGLNQPTYPGHLGTGVEASSI 73

Query: 71 GSFISTGTELDF 82
              S   +  +
Sbjct: 74 QRIRSEFIDRQY 85


>gi|269138580|ref|YP_003295280.1| flagellar basal body rod protein [Edwardsiella tarda EIB202]
 gi|267984240|gb|ACY84069.1| flagellar basal body rod protein [Edwardsiella tarda EIB202]
 gi|304558590|gb|ADM41254.1| Flagellar basal-body rod protein FlgC [Edwardsiella tarda FL6-60]
          Length = 134

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 6/43 (13%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N + + EM   I  ++ + +   +++  +  M++ + 
Sbjct: 89  GYVRMPNVDVVGEMVNSIAASRSYQANVEVLNTTKSLMMKTLT 131



 Score = 39.1 bits (89), Expect = 0.59,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 6/47 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42
           + F+I  +A  A  +R++  A N++N     G     +R  +V F 
Sbjct: 4  LSIFDISGSALTAQSKRMNVAASNLANADSVTGPDGEPYRAKQVVFQ 50


>gi|160903121|ref|YP_001568702.1| flagellar basal-body rod protein FlgC [Petrotoga mobilis SJ95]
 gi|160360765|gb|ABX32379.1| flagellar basal-body rod protein FlgC [Petrotoga mobilis SJ95]
          Length = 140

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 7/42 (16%), Positives = 18/42 (42%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N N + EM  M+   + +     +++  +     A+
Sbjct: 95  GYVSYPNVNVLREMVDMMSAQRAYEMNAAVVNSAKSMYNSAL 136



 Score = 53.3 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 19/137 (13%), Positives = 35/137 (25%), Gaps = 18/137 (13%)

Query: 1   MQTSFN----IGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKN 50
           M         I  +   A   RL  ++ N++N+DT     G  +R   V F E +    N
Sbjct: 1   MMDGLFKVLDIAASGMTAERFRLDVISQNLANSDTTRTEEGGPYRRKAVIFQEALSESTN 60

Query: 51  D--------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTR 102
                    +   +   +  +           + G      +                  
Sbjct: 61  GDRNFGGVKVSSIVEDPSPFRLVYDPNHPDADAEGYVSYPNVNVLREMVDMMSAQRAYEM 120

Query: 103 DGRFKVTDDGSLVSASG 119
           +     +      SA G
Sbjct: 121 NAAVVNSAKSMYNSALG 137


>gi|15596275|ref|NP_249769.1| flagellar basal body rod protein FlgC [Pseudomonas aeruginosa PAO1]
 gi|107100523|ref|ZP_01364441.1| hypothetical protein PaerPA_01001548 [Pseudomonas aeruginosa PACS2]
 gi|116049007|ref|YP_792191.1| flagellar basal body rod protein FlgC [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|152984084|ref|YP_001349652.1| flagellar basal body rod protein FlgC [Pseudomonas aeruginosa PA7]
 gi|218892958|ref|YP_002441827.1| flagellar basal body rod protein FlgC [Pseudomonas aeruginosa
           LESB58]
 gi|254234214|ref|ZP_04927537.1| flagellar basal-body rod protein FlgC [Pseudomonas aeruginosa
           C3719]
 gi|254239436|ref|ZP_04932758.1| flagellar basal-body rod protein FlgC [Pseudomonas aeruginosa 2192]
 gi|296390558|ref|ZP_06880033.1| flagellar basal body rod protein FlgC [Pseudomonas aeruginosa PAb1]
 gi|313106033|ref|ZP_07792292.1| flagellar basal-body rod protein FlgC [Pseudomonas aeruginosa
           39016]
 gi|9946994|gb|AAG04467.1|AE004539_9 flagellar basal-body rod protein FlgC [Pseudomonas aeruginosa PAO1]
 gi|115584228|gb|ABJ10243.1| flagellar basal-body rod protein FlgC [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126166145|gb|EAZ51656.1| flagellar basal-body rod protein FlgC [Pseudomonas aeruginosa
           C3719]
 gi|126192814|gb|EAZ56877.1| flagellar basal-body rod protein FlgC [Pseudomonas aeruginosa 2192]
 gi|150959242|gb|ABR81267.1| flagellar basal-body rod protein FlgC [Pseudomonas aeruginosa PA7]
 gi|218773186|emb|CAW28998.1| flagellar basal-body rod protein FlgC [Pseudomonas aeruginosa
           LESB58]
 gi|310878794|gb|EFQ37388.1| flagellar basal-body rod protein FlgC [Pseudomonas aeruginosa
           39016]
          Length = 146

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 32/72 (44%), Gaps = 6/72 (8%)

Query: 168 GFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
           G V  ++S +    P  P  D +      G++   N N + EM  MI  ++ F +   ++
Sbjct: 78  GIVEDQSSLMPRYEPNHPAADAN------GYVYYPNVNVVEEMADMISASRAFQTNAEMM 131

Query: 228 DENEKSMLEAIR 239
           +  ++ M + + 
Sbjct: 132 NTAKQMMQKVLT 143



 Score = 46.0 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 21/101 (20%), Positives = 37/101 (36%), Gaps = 11/101 (10%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDID----- 53
           FNI  +   A   RL+TVA N++N +TV       +R     FS +    + D       
Sbjct: 7   FNIAGSGMSAQSTRLNTVASNIANAETVSSSVDKTYRARHPVFSTMFQQAQGDSGSLFAD 66

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES 94
           Q  S        + ++  S +        A + + +    +
Sbjct: 67  QDSSGAGVQVLGIVEDQSSLMPRYEPNHPAADANGYVYYPN 107


>gi|270262403|ref|ZP_06190674.1| flagellar basal-body rod protein FlgC [Serratia odorifera 4Rx13]
 gi|270043087|gb|EFA16180.1| flagellar basal-body rod protein FlgC [Serratia odorifera 4Rx13]
          Length = 134

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 6/43 (13%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N + + EM   I  ++ + +   +++  +  M++ + 
Sbjct: 89  GYVRMPNVDVVSEMVNTISASRSYQANVEVLNTTKSMMMKTLT 131



 Score = 36.8 bits (83), Expect = 2.4,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 27/80 (33%), Gaps = 6/80 (7%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSEVVGAIKNDIDQK 55
             F+I  +A  A  QR++  A NM+N     G     +R  +V F     A +     +
Sbjct: 4  LNIFDISGSALSAQSQRMNVSASNMANADSVTGPDGEPYRAKQVVFEVAAAAGQPTGGVR 63

Query: 56 ISFVASGKEYLSKEVGSFIS 75
          +S V                
Sbjct: 64 VSQVVDDPAPERLVYQPGNP 83


>gi|260682026|ref|YP_003213311.1| flagellar basal-body rod protein [Clostridium difficile CD196]
 gi|260685624|ref|YP_003216757.1| flagellar basal-body rod protein [Clostridium difficile R20291]
 gi|260208189|emb|CBA60524.1| flagellar basal-body rod protein [Clostridium difficile CD196]
 gi|260211640|emb|CBE01891.1| flagellar basal-body rod protein [Clostridium difficile R20291]
          Length = 128

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 24/46 (52%), Gaps = 1/46 (2%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G++E  N N + EM  +I  ++ ++S    ++  +  + +A+  I 
Sbjct: 83  GYVEYPNVNILVEMTDLITASRAYDSNVDTLNAQKSMISKAL-EIG 127



 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 33/111 (29%), Gaps = 6/111 (5%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKISF 58
             I  +   A   ++  ++ N++N +         +R   V F E        +  K++ 
Sbjct: 1   MRISASGLTAESLKMDIISSNVANINATRGPNGEAYRRKVVSFEENYDNKLGMLGVKVTS 60

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109
           V   K  L +             +    +    +E    I  +R     V 
Sbjct: 61  VEDDKSPLKEVYDPSHPDAKPNGYVEYPNVNILVEMTDLITASRAYDSNVD 111


>gi|258511369|ref|YP_003184803.1| flagellar basal-body rod protein FlgC [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257478095|gb|ACV58414.1| flagellar basal-body rod protein FlgC [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 144

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 22/42 (52%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++E SN N   +M  +I  T+ + +  T  D  ++  + A+
Sbjct: 99  GYVETSNVNLTTQMVDLIQATRAYQANATAFDAAKQMAVTAL 140



 Score = 48.7 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 35/95 (36%), Gaps = 15/95 (15%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTI---------KVKFSEVVG 46
           TS NI  +   A +  L+ +A+N++N +T     G  +R            V F   +G
Sbjct: 4  NTSMNISASGLAANQLWLNVIANNIANVNTTRTPQGGPYRAEIVNFAPVENDVSFQTALG 63

Query: 47 AIKNDIDQKISFVASGKEYLSKEVGSFISTGTELD 81
               I   +   +  ++    ++    S    ++
Sbjct: 64 QAVQGIGGGVEVTSITQDTSPFQLIYDPSNPDAVN 98


>gi|255099395|ref|ZP_05328372.1| putative flagellar hook-associated protein [Clostridium difficile
          QCD-63q42]
 gi|255305252|ref|ZP_05349424.1| putative flagellar hook-associated protein [Clostridium difficile
          ATCC 43255]
          Length = 436

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 22/41 (53%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
          +  N   +   A ++ + T++ N+SN DT G+   + +F+ 
Sbjct: 6  SILNTANSGMNAHQKAIQTISHNISNLDTDGYSRQRTEFAT 46



 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 6/40 (15%), Positives = 17/40 (42%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           S  +   EM ++I + + + +   ++    + +   I  I
Sbjct: 396 SGVSLDEEMTELIKIQRSYQASAKVMSTAVQLLDVVINGI 435


>gi|89098646|ref|ZP_01171528.1| flagellar basal-body rod protein C [Bacillus sp. NRRL B-14911]
 gi|89086608|gb|EAR65727.1| flagellar basal-body rod protein C [Bacillus sp. NRRL B-14911]
          Length = 149

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 25/42 (59%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G+++  N + + EM  +I  T+ + +  T+ + ++  M++A+
Sbjct: 104 GYVQMPNVDPLREMVDLISATRSYEANVTVFNASKSMMMKAL 145



 Score = 41.8 bits (96), Expect = 0.092,   Method: Composition-based stats.
 Identities = 10/32 (31%), Positives = 16/32 (50%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32
          M  S N   +A  A   R+  ++ NM+N D+ 
Sbjct: 3  MFHSMNTTSSALTAQRLRMDVISSNMANVDST 34


>gi|304310785|ref|YP_003810383.1| Flagellar basal-body rod protein FlgC [gamma proteobacterium HdN1]
 gi|301796518|emb|CBL44726.1| Flagellar basal-body rod protein FlgC [gamma proteobacterium HdN1]
          Length = 145

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N + EM  MI  ++ F +   +++  ++ +   + 
Sbjct: 100 GYVAYPNVNVVEEMTNMISASRSFQTNADVMNSAKQMLSAVLN 142



 Score = 37.5 bits (85), Expect = 1.5,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 22/58 (37%), Gaps = 6/58 (10%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56
          F+I  +   A   RL+T + N++N ++V       +R     F     A   +     
Sbjct: 7  FDIAGSGMSAQTVRLNTTSSNIANAESVASSVDKTYRARHPVFMAQYTAALGNRPTDP 64


>gi|309779445|ref|ZP_07674206.1| flagellar basal-body rod protein FlgC [Ralstonia sp. 5_7_47FAA]
 gi|308921686|gb|EFP67322.1| flagellar basal-body rod protein FlgC [Ralstonia sp. 5_7_47FAA]
          Length = 135

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 20/43 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N + + EM  MI  ++ + +   + +  +    +A+ 
Sbjct: 90  GYVTMPNVDVVDEMVNMISASRSYQANVEVANTTKTMASKALT 132



 Score = 38.3 bits (87), Expect = 0.86,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 31/86 (36%), Gaps = 8/86 (9%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSEVVGAIKNDIDQKI 56
             ++  +A  A  +R++ VA N++N     G     +R  +V FS       +D    +
Sbjct: 5  KVMDVAGSALTAQSKRMNVVASNLANAESVTGPDGKAYRAKQVVFS--PAQESDDYATGV 62

Query: 57 SFVASGKEYLSKEVGSFISTGTELDF 82
          S     ++ ++             D 
Sbjct: 63 SVDRVVEDTVTPMKRMHQPGNPLADA 88


>gi|254443396|ref|ZP_05056872.1| flagellar basal-body rod protein FlgC [Verrucomicrobiae bacterium
           DG1235]
 gi|198257704|gb|EDY82012.1| flagellar basal-body rod protein FlgC [Verrucomicrobiae bacterium
           DG1235]
          Length = 123

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 31/75 (41%), Gaps = 6/75 (8%)

Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224
             +  V  E +G     P  P  D        G ++  N N  +EM  +I  ++ + +  
Sbjct: 51  NVRDVVTDETNGPLVFNPGHPDADEK------GMVQLPNVNLTHEMVDLISASRSYEANL 104

Query: 225 TLIDENEKSMLEAIR 239
            ++  +++   +A+R
Sbjct: 105 QVVRTSKQMAQQALR 119


>gi|222099583|ref|YP_002534151.1| Flagellar hook-associated protein 1 [Thermotoga neapolitana DSM
          4359]
 gi|221571973|gb|ACM22785.1| Flagellar hook-associated protein 1 [Thermotoga neapolitana DSM
          4359]
          Length = 860

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 10/63 (15%), Positives = 20/63 (31%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M    N  L      +  ++ V  N++N +T G+   +             + Q    + 
Sbjct: 8  MFGILNTALTGIYTHKLAMNVVGHNIANANTPGYSRQRPVIEATPPIPLTTLTQPSIPLQ 67

Query: 61 SGK 63
           G 
Sbjct: 68 MGT 70



 Score = 51.0 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 7/39 (17%), Positives = 15/39 (38%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            +   EM  MI     F++   +I   ++ +   I  + 
Sbjct: 822 VSLDEEMANMIEYQHAFSAAAKVISTVDEMIQTVINMVR 860


>gi|255264378|ref|ZP_05343720.1| flagellar basal-body rod protein FlgC [Thalassiobium sp. R2A62]
 gi|255106713|gb|EET49387.1| flagellar basal-body rod protein FlgC [Thalassiobium sp. R2A62]
          Length = 130

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 22/50 (44%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
           S  I  +   A   RL   ++N++N DT G+R     F  +V   ++  
Sbjct: 6  NSLAISASGMAAQTDRLRFTSENIANADTPGYRRKTTSFEAIVEQGQSTG 55



 Score = 37.2 bits (84), Expect = 1.9,   Method: Composition-based stats.
 Identities = 4/48 (8%), Positives = 19/48 (39%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
             G+ + +N + + E+       + + +   + D++ +     +  + 
Sbjct: 82  ASGYYQGTNVDLLIEIADAREAQRSYEANLKMFDQSRQMSSSLMELLR 129


>gi|313895777|ref|ZP_07829331.1| flagellar basal-body rod protein FlgB [Selenomonas sp. oral taxon
          137 str. F0430]
 gi|320529388|ref|ZP_08030476.1| flagellar basal-body rod protein FlgB [Selenomonas artemidis
          F0399]
 gi|312975202|gb|EFR40663.1| flagellar basal-body rod protein FlgB [Selenomonas sp. oral taxon
          137 str. F0430]
 gi|320138354|gb|EFW30248.1| flagellar basal-body rod protein FlgB [Selenomonas artemidis
          F0399]
          Length = 140

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 31/75 (41%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
          ++ +IG  A  A   R   +++N++N +T  FR   V+F +++       +  +  V   
Sbjct: 9  STLDIGSRALAAASLRHEVLSNNIANVNTPNFRRSHVRFEDLLQKELGLAEDPLMKVVRT 68

Query: 63 KEYLSKEVGSFISTG 77
           +          + G
Sbjct: 69 HDRHFPLAFRGKAHG 83


>gi|225375212|ref|ZP_03752433.1| hypothetical protein ROSEINA2194_00837 [Roseburia inulinivorans
          DSM 16841]
 gi|225212879|gb|EEG95233.1| hypothetical protein ROSEINA2194_00837 [Roseburia inulinivorans
          DSM 16841]
          Length = 594

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 22/54 (40%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS 57
          S  IG +     +  L+T ++N++N +T G+   +V   +      N       
Sbjct: 7  SLYIGASGLQNSQNALNTTSNNLANVNTKGYVRQQVLQVDRNYTTFNTTASISQ 60



 Score = 42.2 bits (97), Expect = 0.072,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 18/40 (45%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
            +S  E+ +MI     +N+ +  I+   + +   I  + S
Sbjct: 555 VSSDEELTKMIKFQNAYNASSRFINVVNEMIESMITQLGS 594


>gi|297520377|ref|ZP_06938763.1| flagellar basal body rod protein FlgC [Escherichia coli OP50]
          Length = 103

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 6/43 (13%), Positives = 22/43 (51%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G+++  N + + EM   +  ++ + +   +++  +  ML+ + 
Sbjct: 58  GYVKMPNVDVVGEMVNTMSASRSYQANVEVLNTVKSMMLKTLT 100


>gi|332296506|ref|YP_004438429.1| flagellar basal-body rod protein FlgC [Thermodesulfobium narugense
           DSM 14796]
 gi|332179609|gb|AEE15298.1| flagellar basal-body rod protein FlgC [Thermodesulfobium narugense
           DSM 14796]
          Length = 134

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 7/45 (15%), Positives = 23/45 (51%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           G++E  N N + EM  +I+ ++ + +   ++   +  + + +  +
Sbjct: 89  GYVEYPNVNPIREMVSLINASRSYEADLNVVSATKSMIGQTLDEL 133



 Score = 43.7 bits (101), Expect = 0.023,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 27/82 (32%), Gaps = 7/82 (8%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNT-----DTVG--FRTIKVKFSEVVGAIKNDIDQ 54
            +  I  +   A   ++   A+N++N      D  G  F+   V+  E  G   + +  
Sbjct: 3  LRTLEIAGSGLTAQRLKMDVAANNLANAYSNVKDKNGQIFKRQIVELQESTGKDGSFLGV 62

Query: 55 KISFVASGKEYLSKEVGSFIST 76
          K++ + S               
Sbjct: 63 KVAGIISDNSPPRMVYDPGNPE 84


>gi|46202330|ref|ZP_00053401.2| COG1749: Flagellar hook protein FlgE [Magnetospirillum
           magnetotacticum MS-1]
          Length = 205

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/150 (17%), Positives = 50/150 (33%), Gaps = 28/150 (18%)

Query: 12  QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA--------------IKNDIDQKIS 57
             +++  + +++ N++N +T G++     F  V+                        I 
Sbjct: 1   MQSMDWAMGSISQNIANVNTTGYKEKDTLFKTVLSESHTAPASTQNSPNKNTATTGLDIF 60

Query: 58  FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-----------IILTRDGRF 106
            V +    L  + G+  S+ T  D A+ G  +F +  P              + TR G F
Sbjct: 61  GVRAVDRNLITKSGTITSSTTWSDMAINGRGFFIVTQPDSTGAPGAGGTSGTLYTRAGDF 120

Query: 107 KV---TDDGSLVSASGKYPVLDMASVPIQI 133
                  +    +A G Y +   A     I
Sbjct: 121 TQRAVNGNNYFTTADGNYLMGWAADSKGVI 150


>gi|294501824|ref|YP_003565524.1| flagellar hook-associated protein FlgK [Bacillus megaterium QM
           B1551]
 gi|294351761|gb|ADE72090.1| flagellar hook-associated protein FlgK [Bacillus megaterium QM
           B1551]
          Length = 507

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 12/82 (14%), Positives = 31/82 (37%), Gaps = 6/82 (7%)

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLED-----SNANSMYEMGQMIHLTQKFN 221
            GF +     +S +         +  T+ +G +E      S  +   EM  MI     +N
Sbjct: 424 DGFYQSVIGQMSVDAQQANRLKSNSETL-QGAVEQRRQSTSAVSLDEEMTNMIQFQHAYN 482

Query: 222 SITTLIDENEKSMLEAIRNIAS 243
           +   ++   ++ + + +  + +
Sbjct: 483 ASARMVTMIDEMLDKIVNGLGT 504



 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/89 (14%), Positives = 25/89 (28%), Gaps = 3/89 (3%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDIDQKISFVA 60
             +      A +  L T+  N+SN +T G+   +V    F        N          
Sbjct: 7  GLQVAKRGMDAQQAALYTIGHNVSNANTPGYTRQRVSLETFPAYPAPGMNQTGTAGQIGM 66

Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAW 89
            +    + +          D  ++   W
Sbjct: 67 GVEASTVERIRDTFLDTQYRDETIKVGYW 95


>gi|149195179|ref|ZP_01872270.1| flagellar basal-body rod protein C [Caminibacter mediatlanticus
           TB-2]
 gi|149134731|gb|EDM23216.1| flagellar basal-body rod protein C [Caminibacter mediatlanticus
           TB-2]
          Length = 165

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 19/47 (40%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           G++   N N + EM  +I  T+ + +        +     AI  + +
Sbjct: 119 GYVAYPNINPVIEMADLIEATRSYQANVAAFQSAKNMAQSAINILQA 165



 Score = 43.7 bits (101), Expect = 0.023,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 24/49 (48%), Gaps = 6/49 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44
            SF+I      A   R++ +++N++N +T     G  +R  +V F  +
Sbjct: 4  LNSFDISGYGLSAQRFRINIISENIANANTTRTPEGGPYRRKEVIFKAI 52


>gi|332092853|gb|EGI97921.1| flagellar basal-body rod protein flgF [Shigella dysenteriae 155-74]
          Length = 111

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 35/113 (30%), Gaps = 2/113 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  +    + A      + +  A N++N    GFR        V   ++       + V 
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASMPGFRAQLNALRAV--PVEGLSLPTRTLVT 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113
           +         G    T   LD AL+ D W          +     F++   G+
Sbjct: 59  ASTPGADMTPGKMDYTSRPLDVALQQDGWPCRPLTAAKGIRVMAAFRLIPPGN 111


>gi|120554039|ref|YP_958390.1| flagellar hook-associated protein FlgK [Marinobacter aquaeolei
          VT8]
 gi|120323888|gb|ABM18203.1| flagellar hook-associated protein FlgK [Marinobacter aquaeolei
          VT8]
          Length = 688

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 34/88 (38%), Gaps = 3/88 (3%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M     IGL+  L  +  L+T A+N++N +T G+   +V+F                   
Sbjct: 1  MAGLIGIGLSGVLGYQAALNTTANNITNANTPGYSRQEVQFET---QEGRRTGAGTIGSG 57

Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDA 88
               + +   +++S     D  L G+ 
Sbjct: 58 VSVADIRRLADAYLSQQLREDSTLFGEQ 85


>gi|117923583|ref|YP_864200.1| flagellar basal-body rod protein FlgC [Magnetococcus sp. MC-1]
 gi|117607339|gb|ABK42794.1| flagellar basal-body rod protein FlgC [Magnetococcus sp. MC-1]
          Length = 141

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 25/42 (59%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N + M EM  M+  ++ + +  ++++ +++  L+A+
Sbjct: 96  GYVAMPNIDVMTEMVNMMSASRSYEANVSVLNASKQMALKAL 137



 Score = 41.4 bits (95), Expect = 0.097,   Method: Composition-based stats.
 Identities = 11/122 (9%), Positives = 39/122 (31%), Gaps = 13/122 (10%)

Query: 1   MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVK-----FSEVVGA 47
           M   TSF +  +   A   R++ +++N++N  T     G  ++          F + +  
Sbjct: 1   MDFLTSFKVTASGLAAQRLRMNIISENVANAQTTRTPEGGPYKRRDPVFMSRPFQDYLTR 60

Query: 48  IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107
            ++     ++      ++    +    +                + +    +++    ++
Sbjct: 61  EESAGATGVAVDRVNVDHRPPRLQYDPNHPDANADGYVAMPNIDVMTEMVNMMSASRSYE 120

Query: 108 VT 109
             
Sbjct: 121 AN 122


>gi|255099413|ref|ZP_05328390.1| flagellar basal-body rod protein [Clostridium difficile QCD-63q42]
          Length = 134

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 24/46 (52%), Gaps = 1/46 (2%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G++E  N N + EM  +I  ++ ++S    ++  +  + +A+  I 
Sbjct: 89  GYVEYPNVNILVEMTDLITASRAYDSNVDTLNAQKSMISKAL-EIG 133



 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/113 (15%), Positives = 34/113 (30%), Gaps = 6/113 (5%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKI 56
           +   I  +   A   ++  ++ N++N +         +R   V F E        +  K+
Sbjct: 5   SGMRISASGLTAESLKMDIISSNVANINATRGPNGEAYRRKVVSFEENYDNKLGMLGVKV 64

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109
           + V   K  L K             +    +    +E    I  +R     V 
Sbjct: 65  TSVEDDKSPLKKVYDPSHPDAKPNGYVEYPNVNILVEMTDLITASRAYDSNVD 117


>gi|281412143|ref|YP_003346222.1| flagellar hook-associated protein FlgK [Thermotoga naphthophila
          RKU-10]
 gi|281373246|gb|ADA66808.1| flagellar hook-associated protein FlgK [Thermotoga naphthophila
          RKU-10]
          Length = 858

 Score = 54.1 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 16/43 (37%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
          M    N  L    A +  ++ V  N++N  T G+   +     
Sbjct: 6  MFGILNTALTGIHAHKLAMNVVGHNIANASTPGYSRQRPVIEA 48



 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 7/39 (17%), Positives = 15/39 (38%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            +   EM  MI     F++   +I   ++ +   I  + 
Sbjct: 820 VSLDEEMANMIKYQHAFSAAAKVITAVDQMIQTVINMVG 858


>gi|307731365|ref|YP_003908589.1| flagellar basal-body rod protein FlgC [Burkholderia sp. CCGE1003]
 gi|307585900|gb|ADN59298.1| flagellar basal-body rod protein FlgC [Burkholderia sp. CCGE1003]
          Length = 141

 Score = 54.1 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 25/61 (40%)

Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           P    T  +  +      G++   N + + EM  MI  ++ + +    ++  +  ML+ +
Sbjct: 78  PTPMKTAYDPGNPAANADGYVTLPNVDPVQEMVNMISASRSYQANVETLNTAKTLMLKTL 137

Query: 239 R 239
            
Sbjct: 138 T 138



 Score = 42.9 bits (99), Expect = 0.036,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 6/47 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42
             F +  +A  A  QRL+  A N++N   T G     ++  +V F+
Sbjct: 5  MNIFGVAGSAMSAQSQRLNVTASNLANADSTTGPDGQPYKAKQVVFA 51


>gi|148976392|ref|ZP_01813098.1| flagellar basal-body rod protein C [Vibrionales bacterium SWAT-3]
 gi|145964215|gb|EDK29471.1| flagellar basal-body rod protein C [Vibrionales bacterium SWAT-3]
          Length = 137

 Score = 54.1 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 24/43 (55%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           GF+  SN N M EM  MI  ++ + +   + D +++ +L  ++
Sbjct: 92  GFIYKSNVNVMEEMANMISASRAYQTNVQVADSSKQMLLRTLQ 134



 Score = 36.0 bits (81), Expect = 5.2,   Method: Composition-based stats.
 Identities = 15/81 (18%), Positives = 27/81 (33%), Gaps = 6/81 (7%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56
            FN+  +A  A   RL+T + N++N D+V       ++     F   +   +N      
Sbjct: 5  NVFNVTGSAMSAESVRLNTTSSNLANADSVSSSAKETYKARHAVFGAELNRARNSDHTVP 64

Query: 57 SFVASGKEYLSKEVGSFISTG 77
            V    E        +    
Sbjct: 65 VKVLGIVESDKPLSAEYNPDH 85


>gi|91785636|ref|YP_560842.1| flagellar basal body rod protein FlgC [Burkholderia xenovorans
           LB400]
 gi|296157458|ref|ZP_06840293.1| flagellar basal-body rod protein FlgC [Burkholderia sp. Ch1-1]
 gi|91689590|gb|ABE32790.1| Flagellar basal-body rod protein FlgC [Burkholderia xenovorans
           LB400]
 gi|295892230|gb|EFG72013.1| flagellar basal-body rod protein FlgC [Burkholderia sp. Ch1-1]
          Length = 141

 Score = 54.1 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 25/61 (40%)

Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           P    T  +  +      G++   N + + EM  MI  ++ + +    ++  +  ML+ +
Sbjct: 78  PTPMKTAYDPGNPAANADGYVTLPNVDPVQEMVNMISASRSYQANVETLNTAKTLMLKTL 137

Query: 239 R 239
            
Sbjct: 138 T 138



 Score = 42.9 bits (99), Expect = 0.038,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 6/47 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42
             F +  +A  A  QRL+  A N++N   T G     ++  +V F+
Sbjct: 5  MNIFGVAGSAMSAQSQRLNVTASNLANADSTTGPDGQPYKAKQVVFA 51


>gi|328958286|ref|YP_004375672.1| flagellar basal body rod protein FlgC [Carnobacterium sp. 17-4]
 gi|328674610|gb|AEB30656.1| flagellar basal body rod protein FlgC [Carnobacterium sp. 17-4]
          Length = 145

 Score = 54.1 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 25/43 (58%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G+++  N N   EM  M+   + +++  T ++ +++ + +A++
Sbjct: 99  GYVQMPNVNMADEMIDMMTTLRTYDANVTAMNASKEMLTKALQ 141



 Score = 38.7 bits (88), Expect = 0.66,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 24/60 (40%), Gaps = 7/60 (11%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTV----G---FRTIKVKFSEVVGAIKNDIDQKI 56
          S  I  +       +L T++ N++N +T     G   +   +V F E    ++  +  + 
Sbjct: 6  SMQINASGLSLERLKLDTISTNIANVNTTRTEDGEGPYLKKEVVFEESFKQVETSLAGQG 65


>gi|148269976|ref|YP_001244436.1| flagellar hook-associated protein FlgK [Thermotoga petrophila
          RKU-1]
 gi|147735520|gb|ABQ46860.1| flagellar hook-associated protein FlgK [Thermotoga petrophila
          RKU-1]
          Length = 858

 Score = 54.1 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 16/43 (37%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
          M    N  L    A +  ++ V  N++N  T G+   +     
Sbjct: 6  MFGILNTALTGIHAHKLAMNVVGHNIANASTPGYSRQRPVIEA 48



 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 7/39 (17%), Positives = 15/39 (38%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            +   EM  MI     F++   +I   ++ +   I  + 
Sbjct: 820 VSLDEEMANMIKYQHAFSAAAKVITAVDQMIQTVINMVG 858


>gi|52080221|ref|YP_079012.1| flagellar basal body rod protein FlgC [Bacillus licheniformis ATCC
           14580]
 gi|52785598|ref|YP_091427.1| flagellar basal body rod protein FlgC [Bacillus licheniformis ATCC
           14580]
 gi|319646000|ref|ZP_08000230.1| flagellar basal-body rod protein [Bacillus sp. BT1B_CT2]
 gi|52003432|gb|AAU23374.1| flagellar basal-body rod protein [Bacillus licheniformis ATCC
           14580]
 gi|52348100|gb|AAU40734.1| FlgC [Bacillus licheniformis ATCC 14580]
 gi|317391750|gb|EFV72547.1| flagellar basal-body rod protein [Bacillus sp. BT1B_CT2]
          Length = 150

 Score = 54.1 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 7/42 (16%), Positives = 24/42 (57%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G+++  N + + EM  ++  T+ + +  T ++  +  +++A+
Sbjct: 105 GYVQMPNVDPLKEMVDLMSSTRSYEANVTAMNATKGMLMKAL 146



 Score = 46.0 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 38/114 (33%), Gaps = 17/114 (14%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTV------G----FRTIKV-------KFSEVV 45
            S NI  +A  A   R+ TV+ N++N DT       G    +R   V        FS V+
Sbjct: 5   NSINISASALTAQRVRMDTVSSNLANMDTTRAKLVDGQWQPYRRKLVSTAPKGESFSSVL 64

Query: 46  GAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
            +  N   +    V   K    K     +   T  D   +G        P   +
Sbjct: 65  QSSMNASARVGEGVKVTKISEDKTPFKLVYDPTHPDANEDGYVQMPNVDPLKEM 118


>gi|330502732|ref|YP_004379601.1| flagellar basal body rod protein FlgC [Pseudomonas mendocina NK-01]
 gi|328917018|gb|AEB57849.1| flagellar basal body rod protein FlgC [Pseudomonas mendocina NK-01]
          Length = 147

 Score = 54.1 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N + EM  MI  ++ F +   +++  ++ +   + 
Sbjct: 102 GYVYYPNVNVVEEMADMISASRAFQTNVEMMNTAKQMLQRVLT 144



 Score = 45.2 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 6/53 (11%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKND 51
          FNI      A   RL+T++ N++N +TV       +R     F+ V    +  
Sbjct: 7  FNIAGTGMSAQSTRLNTISSNIANAETVSSSLDQTYRARHPVFATVFQQAQGG 59


>gi|311280019|ref|YP_003942250.1| flagellar basal-body rod protein FlgC [Enterobacter cloacae SCF1]
 gi|308749214|gb|ADO48966.1| flagellar basal-body rod protein FlgC [Enterobacter cloacae SCF1]
          Length = 134

 Score = 54.1 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 6/43 (13%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N + + EM   +  ++ + +   +++  +  ML+ + 
Sbjct: 89  GYVRMPNVDVVGEMVNTMSASRSYQANVEVLNTVKSMMLKTLT 131



 Score = 38.3 bits (87), Expect = 1.0,   Method: Composition-based stats.
 Identities = 14/105 (13%), Positives = 29/105 (27%), Gaps = 7/105 (6%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS-EVVGAIKNDIDQ 54
            + F++  +A  A  +RL+  A N++N     G     +R  +V F  +          +
Sbjct: 4   LSIFDVAGSALTAQSKRLNVAASNLANADSVTGPDGQPYRAKQVVFQVDAPIGAATGGVK 63

Query: 55  KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
             + V S                 +    +               
Sbjct: 64  VANVVESQAPDKLVFQPGNPLADAKGYVRMPNVDVVGEMVNTMSA 108


>gi|254519436|ref|ZP_05131492.1| flagellar hook-associated protein 1 [Clostridium sp. 7_2_43FAA]
 gi|226913185|gb|EEH98386.1| flagellar hook-associated protein 1 [Clostridium sp. 7_2_43FAA]
          Length = 611

 Score = 54.1 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 33/98 (33%), Gaps = 2/98 (2%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
           ++FNI        ++ +   + N++N++TVG+   + K                S  A  
Sbjct: 6   STFNIAKRGMNVQQKSIDVTSHNIANSNTVGYSRQRAKIET--SRPFGGTSMGSSVQAGQ 63

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL 100
               ++           LD+ + G++    +       
Sbjct: 64  LGTGAQIRAIERVRDNFLDYQVRGESAVLGKYDIRNNF 101



 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 6/40 (15%), Positives = 16/40 (40%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           S  +   EM  ++     +N+   +I   ++ +   I  +
Sbjct: 570 SGVSLDEEMANLVQFQHAYNANAKIISTVDELLEVIINGL 609


>gi|170288661|ref|YP_001738899.1| flagellar hook-associated protein FlgK [Thermotoga sp. RQ2]
 gi|170176164|gb|ACB09216.1| flagellar hook-associated protein FlgK [Thermotoga sp. RQ2]
          Length = 858

 Score = 54.1 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 16/43 (37%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
          M    N  L    A +  ++ V  N++N  T G+   +     
Sbjct: 6  MFGILNTALTGIHAHKLAMNVVGHNIANASTPGYSRQRPVIEA 48



 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 7/39 (17%), Positives = 15/39 (38%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            +   EM  MI     F++   +I   ++ +   I  + 
Sbjct: 820 VSLDEEMANMIEYQHAFSAAAKVITAVDQMIQTVINMVG 858


>gi|149182549|ref|ZP_01861021.1| flagellar hook-associated protein [Bacillus sp. SG-1]
 gi|148849741|gb|EDL63919.1| flagellar hook-associated protein [Bacillus sp. SG-1]
          Length = 529

 Score = 54.1 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 11/90 (12%), Positives = 32/90 (35%), Gaps = 6/90 (6%)

Query: 159 GLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLE-----DSNANSMYEMGQM 213
               +   + +      G++ +         +  T+++  +E      S  +   EM  M
Sbjct: 438 QNSQMANFRNYYEVLIGGMAVDAQNAVRLTDNSATLRQ-AVEERRMSTSAVSLDEEMTNM 496

Query: 214 IHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           I     +N+   +I   ++ + + I  + +
Sbjct: 497 IQYQHAYNASARMISLQDELLDKIINGMGT 526



 Score = 48.3 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 15/41 (36%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
                       +  L     N++N +T+GF   ++ F +
Sbjct: 6  QGLETARRGMYTQQSALQVTGHNVANANTLGFTRQRINFEQ 46


>gi|312135856|ref|YP_004003194.1| flagellar basal-body rod protein flgc [Caldicellulosiruptor
           owensensis OL]
 gi|311775907|gb|ADQ05394.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor
           owensensis OL]
          Length = 145

 Score = 54.1 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 34/103 (33%)

Query: 135 QKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTV 194
           Q      V  +       +++          S G VR +     P+      +       
Sbjct: 38  QPYRRKIVVFEERKQNFSQILNQKIEQIQASSSGGVRVKAILEDPSPFKKVYDPTHPDAD 97

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
           + G++   N + + EM  MI  ++ + +  T ++  +  +   
Sbjct: 98  QNGYVNYPNVDIVTEMVNMIEASRSYEANVTALNITKSMITRT 140



 Score = 52.9 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 6/49 (12%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43
          M  + NI  +A  A   R+  +A N++N +T     G  +R   V F E
Sbjct: 1  MFDAINISSSALTAQRVRMDVIAQNIANANTTRTENGQPYRRKIVVFEE 49


>gi|209521587|ref|ZP_03270285.1| flagellar basal-body rod protein FlgC [Burkholderia sp. H160]
 gi|209497970|gb|EDZ98127.1| flagellar basal-body rod protein FlgC [Burkholderia sp. H160]
          Length = 141

 Score = 54.1 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 26/61 (42%)

Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           P+   T  E  +      G++   N + + EM  MI  ++ + +    ++  +  ML+ +
Sbjct: 78  PSPMKTAYEPGNPAANADGYVTLPNVDPVQEMVNMISASRSYQANVETLNTAKTLMLKTL 137

Query: 239 R 239
            
Sbjct: 138 T 138



 Score = 42.5 bits (98), Expect = 0.055,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 6/47 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42
             F +  +A  A  +RL+  A N++N   T G     ++  +V F+
Sbjct: 5  MNIFGVAGSAMSAQSERLNVTASNLANADSTTGPDGQPYKAKQVVFA 51


>gi|126668564|ref|ZP_01739518.1| flagellar hook-associated protein [Marinobacter sp. ELB17]
 gi|126626969|gb|EAZ97612.1| flagellar hook-associated protein [Marinobacter sp. ELB17]
          Length = 668

 Score = 54.1 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 35/88 (39%), Gaps = 3/88 (3%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M     IGL+  L  +  L+T A+N++N +T G+    V+F                   
Sbjct: 1  MAGLLGIGLSGILGSQAALNTTANNITNANTPGYSRQDVQFG---AQTPQRTGAGSIGTG 57

Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDA 88
             E + +    +++     D +LEG+ 
Sbjct: 58 VNVENIRRLANEYLTQQIREDSSLEGEQ 85


>gi|88858145|ref|ZP_01132787.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Pseudoalteromonas tunicata D2]
 gi|88819762|gb|EAR29575.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Pseudoalteromonas tunicata D2]
          Length = 140

 Score = 54.1 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 21/42 (50%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           GF+  SN N + EM  MI  ++ + +   L D  +  + + I
Sbjct: 94  GFIYKSNVNVVEEMANMISASRAYQTNVQLADAAKSMLSKTI 135



 Score = 37.5 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 30/95 (31%), Gaps = 8/95 (8%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56
            F+I      A   RL+T A NMSN ++V       +R     F+  +   K    Q+ 
Sbjct: 5  NVFDISATGMSAQSVRLNTTASNMSNANSVSSSIDQTYRARHPVFAAEL--TKAAASQQG 62

Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA 91
            V      + +                + D +  
Sbjct: 63 ESVGVKVLGIVESDKPLQIEFNPTHPMADKDGFIY 97


>gi|302342345|ref|YP_003806874.1| flagellar basal-body rod protein FlgC [Desulfarculus baarsii DSM
           2075]
 gi|301638958|gb|ADK84280.1| flagellar basal-body rod protein FlgC [Desulfarculus baarsii DSM
           2075]
          Length = 147

 Score = 54.1 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 22/42 (52%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N + + EM  +I  T+ + +  + +  ++   L+A+
Sbjct: 102 GYVLYPNVDVVTEMVNLISATRSYEANVSAVGASKNMALKAL 143



 Score = 45.2 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 2/34 (5%)

Query: 1  MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTV 32
          M   TS  I  +   A   RL+ ++ N++N +T 
Sbjct: 1  MDFVTSMEISASGLSAQRTRLNIISQNLANAETT 34


>gi|90408058|ref|ZP_01216229.1| flagellar basal-body rod protein FlgC [Psychromonas sp. CNPT3]
 gi|90310815|gb|EAS38929.1| flagellar basal-body rod protein FlgC [Psychromonas sp. CNPT3]
          Length = 140

 Score = 54.1 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 22/43 (51%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           GF+  SN N M EM  MI  ++ + +   + D  ++ +   ++
Sbjct: 94  GFVYHSNVNVMEEMANMISASRSYQTNVQIADAAKQMLSRTLQ 136



 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 22/66 (33%), Gaps = 10/66 (15%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTD--------TVGFRTIKVKFSEVVGAIKNDIDQ 54
             +I      A   RL+T A N++N +        T  +R     F+  +   K  +  
Sbjct: 5  RILDISATGMSAQSVRLNTTASNLANANSVSSSSEKT--YRARHPVFAAELNKAKGALSS 62

Query: 55 KISFVA 60
              V 
Sbjct: 63 SGVGVK 68


>gi|89902475|ref|YP_524946.1| flagellar basal-body rod protein FlgC [Rhodoferax ferrireducens
           T118]
 gi|89347212|gb|ABD71415.1| flagellar basal-body rod protein FlgC [Rhodoferax ferrireducens
           T118]
          Length = 134

 Score = 54.1 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 24/43 (55%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++  SN N + EM  MI  ++ + +   +++  +  +L+ ++
Sbjct: 89  GYVTQSNVNPIEEMVNMISASRSYQNNVEVMNTAKTLLLKTLQ 131



 Score = 42.2 bits (97), Expect = 0.061,   Method: Composition-based stats.
 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 6/50 (12%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEV 44
          M + FN+  +A  A  QRL+ VA N++N D V      G++  +V F  V
Sbjct: 3  MFSIFNVSGSAISAQSQRLNVVASNLANADAVAGPDGQGYKGRQVVFETV 52


>gi|73539448|ref|YP_299815.1| flagellar basal-body rod protein FlgC [Ralstonia eutropha JMP134]
 gi|72122785|gb|AAZ64971.1| Flagellar basal-body rod protein FlgC [Ralstonia eutropha JMP134]
          Length = 135

 Score = 54.1 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/96 (17%), Positives = 37/96 (38%)

Query: 144 EKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSN 203
             G+  +  +VI  M         G V+ +     P+ P         +    G++   N
Sbjct: 37  PDGQAYRTKQVIFGMAPTPGQSDVGGVQVQGVMEDPSPPRMVHNPTHPMANAEGYVVMPN 96

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            N + EM  MI  ++ + +   +++  +  ML+ + 
Sbjct: 97  VNPVEEMVNMISASRSYQANVEVLNSAKNMMLKTLT 132



 Score = 37.2 bits (84), Expect = 2.3,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 38/109 (34%), Gaps = 7/109 (6%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQ- 54
              F++  +A  A  QR++  A N++N D+V       +RT +V F       ++D+   
Sbjct: 4   MNIFDVAGSAMAAQSQRMNVTASNLANADSVVSPDGQAYRTKQVIFGMAPTPGQSDVGGV 63

Query: 55  KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103
           ++  V                      + +  +     E    I  +R 
Sbjct: 64  QVQGVMEDPSPPRMVHNPTHPMANAEGYVVMPNVNPVEEMVNMISASRS 112


>gi|254973892|ref|ZP_05270364.1| putative flagellar hook-associated protein [Clostridium difficile
          QCD-66c26]
 gi|255091277|ref|ZP_05320755.1| putative flagellar hook-associated protein [Clostridium difficile
          CIP 107932]
 gi|255312936|ref|ZP_05354519.1| putative flagellar hook-associated protein [Clostridium difficile
          QCD-76w55]
 gi|255515695|ref|ZP_05383371.1| putative flagellar hook-associated protein [Clostridium difficile
          QCD-97b34]
 gi|255648789|ref|ZP_05395691.1| putative flagellar hook-associated protein [Clostridium difficile
          QCD-37x79]
 gi|260682009|ref|YP_003213294.1| putative flagellar hook-associated protein [Clostridium difficile
          CD196]
 gi|260685607|ref|YP_003216740.1| putative flagellar hook-associated protein [Clostridium difficile
          R20291]
 gi|260208172|emb|CBA60493.1| putative flagellar hook-associated protein [Clostridium difficile
          CD196]
 gi|260211623|emb|CBE01861.1| putative flagellar hook-associated protein [Clostridium difficile
          R20291]
          Length = 436

 Score = 54.1 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 22/41 (53%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
          +  N   +   A ++ + T++ N+SN DT G+   + +F+ 
Sbjct: 6  SILNTANSGMNAHQKAIQTISHNISNLDTDGYSRQRTEFAT 46



 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 6/40 (15%), Positives = 17/40 (42%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           S  +   EM ++I + + + +   ++    + +   I  I
Sbjct: 396 SGVSLDEEMTELIKIQRSYQASAKVMSTAVQLLDVVINGI 435


>gi|146307871|ref|YP_001188336.1| flagellar basal body rod protein FlgC [Pseudomonas mendocina ymp]
 gi|145576072|gb|ABP85604.1| flagellar basal-body rod protein FlgC [Pseudomonas mendocina ymp]
          Length = 147

 Score = 54.1 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N + EM  MI  ++ F +   +++  ++ +   + 
Sbjct: 102 GYVYYPNVNVVEEMADMISASRAFQTNVEMMNTAKQMLQRVLT 144



 Score = 45.2 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 6/53 (11%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKND 51
          FNI      A   RL+T++ N++N +TV       +R     F+ V    +  
Sbjct: 7  FNIAGTGMSAQSTRLNTISSNIANAETVSSSIDQTYRARHPVFATVFQQAQGG 59


>gi|17548564|ref|NP_521904.1| flagellar basal-body rod protein FlgC [Ralstonia solanacearum
           GMI1000]
 gi|300693335|ref|YP_003749308.1| flagellar basal-body rod protein flgc (proximal rod protein)
           [Ralstonia solanacearum PSI07]
 gi|17430812|emb|CAD17494.1| probable flagellar basal-body rod protein flgc [Ralstonia
           solanacearum GMI1000]
 gi|299075372|emb|CBJ34667.1| Flagellar basal-body rod protein flgC (proximal rod protein)
           [Ralstonia solanacearum PSI07]
          Length = 135

 Score = 54.1 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 20/43 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N + + EM  MI  ++ + +   + +  +    +A+ 
Sbjct: 90  GYVTMPNVDVVDEMVNMISASRSYQANVEVANTTKTMAAKALT 132



 Score = 37.9 bits (86), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 23/46 (50%), Gaps = 6/46 (13%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDT------VGFRTIKVKFS 42
             ++  +A  A  +R++ VA N++N ++        +R  +V FS
Sbjct: 5  KVMDVAGSALTAQSKRMNVVASNLANAESVTGPDGTAYRAKQVVFS 50


>gi|295111496|emb|CBL28246.1| flagellar basal-body rod protein FlgC [Synergistetes bacterium
           SGP1]
          Length = 139

 Score = 54.1 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 9/65 (13%), Positives = 25/65 (38%)

Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
              P    +       K G++   N N + EM  M+  ++ + +  +++    +    A+
Sbjct: 75  RTAPRMTYQPDHPDADKDGYVAYPNVNLVREMTDMLVASRAYEANLSVVTTAREMWNGAL 134

Query: 239 RNIAS 243
             + +
Sbjct: 135 EVMRA 139



 Score = 49.5 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 10/82 (12%), Positives = 24/82 (29%), Gaps = 6/82 (7%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDIDQKIS 57
          S  +  +A  A    + T++ N++N +T     G  ++     F+E++            
Sbjct: 6  SMEVAGSALTAHRLWMDTISSNLANINTTRTLSGGPYKRRVPVFAEMLDRTIGGYRDIGG 65

Query: 58 FVASGKEYLSKEVGSFISTGTE 79
             +                  
Sbjct: 66 VRVTAITEDRTAPRMTYQPDHP 87


>gi|291520179|emb|CBK75400.1| Flagellar hook-associated protein [Butyrivibrio fibrisolvens
          16/4]
          Length = 199

 Score = 54.1 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 27/77 (35%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
          S  +G +   +    L+T A+N+SN +T G+   +V + +              +   G 
Sbjct: 7  SLYVGASGLQSASHGLNTTANNLSNINTEGYVREQVVYEDRNYQKIGTAAISTQYRGLGV 66

Query: 64 EYLSKEVGSFISTGTEL 80
          +  +      I      
Sbjct: 67 QVGTIVHARDIFLDKAY 83


>gi|255598721|ref|XP_002537067.1| Flagellar basal-body rod protein flgC, putative [Ricinus communis]
 gi|223517602|gb|EEF25316.1| Flagellar basal-body rod protein flgC, putative [Ricinus communis]
          Length = 121

 Score = 54.1 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 20/43 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N   EM  MI  ++ + +    ++  +  +L+ + 
Sbjct: 76  GYITMPNVNVTEEMVNMISASRAYQNNVETMNAAKTMLLKTLN 118


>gi|254476330|ref|ZP_05089716.1| flagellar basal-body rod protein FlgC [Ruegeria sp. R11]
 gi|214030573|gb|EEB71408.1| flagellar basal-body rod protein FlgC [Ruegeria sp. R11]
          Length = 130

 Score = 54.1 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/42 (40%), Positives = 23/42 (54%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44
           S +I  +A  A   RL  V++N+SN DT G+R   V F  V
Sbjct: 6  KSLSISASALQAQSTRLRHVSENISNADTPGYRRKTVPFEAV 47



 Score = 40.6 bits (93), Expect = 0.17,   Method: Composition-based stats.
 Identities = 5/38 (13%), Positives = 15/38 (39%)

Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
            G  + SN + M E+       + + +   + ++  + 
Sbjct: 83  SGHYKGSNVDLMIEIADAREAQRSYEANLKMFEQGRQM 120


>gi|222100200|ref|YP_002534768.1| Flagellar basal-body rod protein FlgC [Thermotoga neapolitana DSM
           4359]
 gi|221572590|gb|ACM23402.1| Flagellar basal-body rod protein FlgC [Thermotoga neapolitana DSM
           4359]
          Length = 139

 Score = 54.1 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N + EM  +I+  + +++     +  +  +  A++
Sbjct: 93  GYVRMPNVNIVREMVDLINAQRAYDANVAAFNVTKNMVNSALQ 135



 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 22/53 (41%), Gaps = 6/53 (11%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKND 51
           NI      A   R+  V+ N++N +T     G  +R     F+E +   K+ 
Sbjct: 7  MNISATGMSAQRLRVEIVSTNIANAETTRTEMGEPYRRKVPVFAEYLRRAKDG 59


>gi|222529660|ref|YP_002573542.1| flagellar hook-associated protein FlgK [Caldicellulosiruptor bescii
           DSM 6725]
 gi|222456507|gb|ACM60769.1| flagellar hook-associated protein FlgK [Caldicellulosiruptor bescii
           DSM 6725]
          Length = 525

 Score = 54.1 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/192 (10%), Positives = 55/192 (28%), Gaps = 11/192 (5%)

Query: 51  DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTD 110
            I   ++ +    + L ++     + G  L+    G  +F     +     R  +     
Sbjct: 341 GIPYYLNRLNEFAQKLIEKFNELHTQGWSLNGQNTGINFFEPPVGQTFFYARYIKVSDAI 400

Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170
              L + +  Y    +      +    ++ N     +  +    + ++       SQG  
Sbjct: 401 MNDLNNIATTYDASSLPGGNDLVVDMLKLRNDNSVFKEGKFEDFLKSLISNLGVDSQG-- 458

Query: 171 RRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
                  + N      +  +      G       +   EM  +I     F +   +I+  
Sbjct: 459 ---AKNFAENQKVMVTQLDNRRQAVSG------VSIDEEMTNLIKYQHGFQASARMINAF 509

Query: 231 EKSMLEAIRNIA 242
           ++ +   +  + 
Sbjct: 510 DEMLDVIVNRLG 521



 Score = 42.5 bits (98), Expect = 0.052,   Method: Composition-based stats.
 Identities = 11/77 (14%), Positives = 21/77 (27%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
             I         + L   + N++N  T G+    +       + K         V  G 
Sbjct: 5  GLEIARTGIFVNRKGLEVTSHNVANASTPGYTRQVLNVKSNPPSAKVGFYSPKFQVGLGA 64

Query: 64 EYLSKEVGSFISTGTEL 80
          +  S E    +    + 
Sbjct: 65 DVQSLEQIRDMFLDVQY 81


>gi|253990129|ref|YP_003041485.1| flagellar basal body rod protein FlgC [Photorhabdus asymbiotica
           subsp. asymbiotica ATCC 43949]
 gi|211639034|emb|CAR67648.1| flagellar basal-body rod protein flgc (putative proximal rod
           protein) [Photorhabdus asymbiotica subsp. asymbiotica
           ATCC 43949]
 gi|253781579|emb|CAQ84742.1| flagellar basal-body rod protein flgc (putative proximal rod
           protein) [Photorhabdus asymbiotica]
          Length = 134

 Score = 54.1 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N + + EM   I  ++ + +   +++  +  ML+ + 
Sbjct: 89  GYVRMPNVDVVGEMINTISASRSYQANVEVLNTTKSLMLKTLT 131



 Score = 39.9 bits (91), Expect = 0.33,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 31/101 (30%), Gaps = 7/101 (6%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFS-EVVGAIKNDIDQ 54
            + F+I  +A  A  QRL+  A NM+N D+V       +R  +V F        +    +
Sbjct: 4   LSVFDIAGSALSAQSQRLNVSASNMANADSVAGPDGQPYRAKQVVFRVAAPAGQETGGVR 63

Query: 55  KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP 95
               V     +  +          +    +           
Sbjct: 64  VSEIVDDPTPFRLEYQPGHPLADEKGYVRMPNVDVVGEMIN 104


>gi|126697817|ref|YP_001086714.1| flagellar basal-body rod protein [Clostridium difficile 630]
 gi|254973910|ref|ZP_05270382.1| flagellar basal-body rod protein [Clostridium difficile QCD-66c26]
 gi|255091296|ref|ZP_05320774.1| flagellar basal-body rod protein [Clostridium difficile CIP 107932]
 gi|255305270|ref|ZP_05349442.1| flagellar basal-body rod protein [Clostridium difficile ATCC 43255]
 gi|255312954|ref|ZP_05354537.1| flagellar basal-body rod protein [Clostridium difficile QCD-76w55]
 gi|255515713|ref|ZP_05383389.1| flagellar basal-body rod protein [Clostridium difficile QCD-97b34]
 gi|255648807|ref|ZP_05395709.1| flagellar basal-body rod protein [Clostridium difficile QCD-37x79]
 gi|306518922|ref|ZP_07405269.1| flagellar basal body rod protein FlgC [Clostridium difficile
           QCD-32g58]
 gi|115249254|emb|CAJ67067.1| Flagellar basal-body rod protein FlgC [Clostridium difficile]
          Length = 134

 Score = 54.1 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 24/46 (52%), Gaps = 1/46 (2%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G++E  N N + EM  +I  ++ ++S    ++  +  + +A+  I 
Sbjct: 89  GYVEYPNVNILVEMTDLITASRAYDSNVDTLNAQKSMISKAL-EIG 133



 Score = 46.0 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/113 (14%), Positives = 34/113 (30%), Gaps = 6/113 (5%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKI 56
           +   I  +   A   ++  ++ N++N +         +R   V F E        +  K+
Sbjct: 5   SGMRISASGLTAESLKMDIISSNVANINATRGPNGEAYRRKVVSFEENYDNKLGMLGVKV 64

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109
           + V   K  L +             +    +    +E    I  +R     V 
Sbjct: 65  TSVEDDKSPLKEVYDPSHPDAKPNGYVEYPNVNILVEMTDLITASRAYDSNVD 117


>gi|94312667|ref|YP_585876.1| flagellar basal body rod protein FlgC [Cupriavidus metallidurans
           CH34]
 gi|93356519|gb|ABF10607.1| flagellar basal body rod protein FlgC [Cupriavidus metallidurans
           CH34]
          Length = 135

 Score = 54.1 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/96 (15%), Positives = 33/96 (34%)

Query: 144 EKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSN 203
             G+  +  +VI  M         G V+                    +    G++   N
Sbjct: 37  PNGQPYRAKQVIFEMAPTPGQSDVGGVQVAGVMEDTAPARMVHNPSHPLADANGYVTMPN 96

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            N + EM  MI  ++ + +   +++  +  ML+ + 
Sbjct: 97  VNPVEEMVNMISASRSYQANVEVLNTAKNMMLKTLT 132



 Score = 36.0 bits (81), Expect = 5.0,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 28/58 (48%), Gaps = 6/58 (10%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDT----VG--FRTIKVKFSEVVGAIKNDID 53
           + F++  +A  A  QR++  A N++N D+     G  +R  +V F       ++D+ 
Sbjct: 4  MSIFDVAGSAMAAQSQRMNVTASNLANADSAVAPNGQPYRAKQVIFEMAPTPGQSDVG 61


>gi|118444436|ref|YP_877973.1| flagellar basal body rod protein FlgC [Clostridium novyi NT]
 gi|118134892|gb|ABK61936.1| flagellar basal-body rod protein FlgC [Clostridium novyi NT]
          Length = 145

 Score = 54.1 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 23/42 (54%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N N + EM  MI  T+ + +  T I+ ++   ++A+
Sbjct: 100 GYVLMPNVNILNEMADMIAATRAYEANVTAINSSKNMFMKAL 141



 Score = 36.0 bits (81), Expect = 5.1,   Method: Composition-based stats.
 Identities = 8/30 (26%), Positives = 15/30 (50%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV 32
          +S  I  +   A   R+ T++ N++N  T 
Sbjct: 5  SSMRISASGLAAERLRMDTISSNITNFKTT 34


>gi|57167572|ref|ZP_00366712.1| flagellar basal-body rod protein FlgC [Campylobacter coli RM2228]
 gi|305433078|ref|ZP_07402234.1| flagellar basal-body rod protein FlgC [Campylobacter coli JV20]
 gi|57020694|gb|EAL57358.1| flagellar basal-body rod protein FlgC [Campylobacter coli RM2228]
 gi|304443779|gb|EFM36436.1| flagellar basal-body rod protein FlgC [Campylobacter coli JV20]
          Length = 164

 Score = 54.1 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 20/48 (41%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            +G++   N N + EM  +I  T+ + +  +     +     AI  + 
Sbjct: 116 AQGYVAYPNVNPVIEMADLIEATRAYQANVSAFTSAKTIAQSAIDLLR 163



 Score = 42.9 bits (99), Expect = 0.038,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 18/39 (46%), Gaps = 6/39 (15%)

Query: 11 AQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43
             A   R++ ++ N++N +T     G  +R  +V F  
Sbjct: 13 GLSAQRFRMNVISSNIANANTTRTAEGGPYRRREVIFKA 51


>gi|323341388|ref|ZP_08081632.1| flagellar basal-body rod protein FlgC [Lactobacillus ruminis ATCC
           25644]
 gi|323091265|gb|EFZ33893.1| flagellar basal-body rod protein FlgC [Lactobacillus ruminis ATCC
           25644]
          Length = 139

 Score = 54.1 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 21/42 (50%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++E  N N   EM  MI   + + +  +  + N+  + +A+
Sbjct: 93  GYVEMPNVNMADEMVDMIQAMRTYEANVSSTEANKNILKKAL 134



 Score = 42.5 bits (98), Expect = 0.044,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 23/64 (35%), Gaps = 6/64 (9%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDIDQKI 56
              I  +       +L   + N++N +T     G  ++   V+FSE +   +       
Sbjct: 5  NGLQINASGLSLERMKLDVASTNIANVNTTRTAEGGPYKKKTVEFSENLRQAQGTNKITS 64

Query: 57 SFVA 60
          + V 
Sbjct: 65 AGVK 68


>gi|149927804|ref|ZP_01916055.1| Flagellar hook-associated protein [Limnobacter sp. MED105]
 gi|149823426|gb|EDM82657.1| Flagellar hook-associated protein [Limnobacter sp. MED105]
          Length = 576

 Score = 54.1 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 30/87 (34%), Gaps = 1/87 (1%)

Query: 1  MQTSFN-IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFV 59
          M  S   I L+   A    LST + N++N++TVGF   +V          +         
Sbjct: 1  MSNSVYGIALSGLNAARAGLSTTSHNIANSNTVGFNRQQVIQQSRPSTGSDIGYIGQGVD 60

Query: 60 ASGKEYLSKEVGSFISTGTELDFALEG 86
           +  + +  +  +        D A   
Sbjct: 61 IASVQRVYSDFINSQEQKATSDAAFYN 87


>gi|240145383|ref|ZP_04743984.1| flagellar hook-associated protein FlgK [Roseburia intestinalis
          L1-82]
 gi|257202504|gb|EEV00789.1| flagellar hook-associated protein FlgK [Roseburia intestinalis
          L1-82]
          Length = 587

 Score = 54.1 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 23/40 (57%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
          S  IG+A   + +  L+  ++N++N DT G+    V F++
Sbjct: 7  SMFIGVAGLQSSQNALNVTSNNLANLDTTGYVRQSVLFAD 46



 Score = 37.5 bits (85), Expect = 1.5,   Method: Composition-based stats.
 Identities = 7/39 (17%), Positives = 16/39 (41%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            +S  E+  MI     +N+ +  I+   + +   I  + 
Sbjct: 549 VSSDEELTYMIKYQNAYNASSRFINVINEMIEHLITQLG 587


>gi|291539398|emb|CBL12509.1| flagellar hook-associated protein FlgK [Roseburia intestinalis
          XB6B4]
          Length = 587

 Score = 54.1 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 23/40 (57%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
          S  IG+A   + +  L+  ++N++N DT G+    V F++
Sbjct: 7  SMFIGVAGLQSSQNALNVTSNNLANLDTTGYVRQSVLFAD 46



 Score = 37.5 bits (85), Expect = 1.5,   Method: Composition-based stats.
 Identities = 7/39 (17%), Positives = 16/39 (41%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            +S  E+  MI     +N+ +  I+   + +   I  + 
Sbjct: 549 VSSDEELTYMIKYQNAYNASSRFINVINEMIEHLITQLG 587


>gi|83747656|ref|ZP_00944692.1| FlgC [Ralstonia solanacearum UW551]
 gi|300696911|ref|YP_003747572.1| FlgC: flagellar basal-body rod protein [Ralstonia solanacearum
           CFBP2957]
 gi|83725708|gb|EAP72850.1| FlgC [Ralstonia solanacearum UW551]
 gi|299073635|emb|CBJ53155.1| FlgC: Flagellar basal-body rod protein [Ralstonia solanacearum
           CFBP2957]
          Length = 135

 Score = 54.1 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 20/43 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N + + EM  MI  ++ + +   + +  +    +A+ 
Sbjct: 90  GYVTMPNVDVVDEMVNMISASRSYQANVEVANTTKTMAAKALT 132



 Score = 39.1 bits (89), Expect = 0.59,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 31/85 (36%), Gaps = 6/85 (7%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDT------VGFRTIKVKFSEVVGAIKNDIDQKI 56
             ++  +A  A  +R++ VA N++N ++        +R  +V FS   G         +
Sbjct: 5  KVMDVAGSALTAQSKRMNVVASNLANAESVTGPDGTAYRAKQVVFSPEQGTDGYATGVSV 64

Query: 57 SFVASGKEYLSKEVGSFISTGTELD 81
            V        K +    +   + D
Sbjct: 65 DGVVEDTVTPMKRMHQPGNPLADAD 89


>gi|312126817|ref|YP_003991691.1| flagellar basal-body rod protein flgc [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311776836|gb|ADQ06322.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 147

 Score = 54.1 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 20/43 (46%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
           + G++   N + + EM  MI  ++ + +  T ++  +  +   
Sbjct: 100 QNGYVNYPNVDIVTEMVNMIEASRSYEANVTALNITKSMITRT 142



 Score = 53.3 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 6/49 (12%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSE 43
          M  + NI  +A  A   R+  +A N++N +T        +R   V F E
Sbjct: 3  MFDAINISSSALTAQRVRMDVIAQNIANANTTKTENGQPYRRKVVVFEE 51


>gi|124268256|ref|YP_001022260.1| flagellar basal body rod protein [Methylibium petroleiphilum PM1]
 gi|124261031|gb|ABM96025.1| flagellar basal body rod protein [Methylibium petroleiphilum PM1]
          Length = 138

 Score = 54.1 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 25/43 (58%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++  SN N++ EM  MI  ++ + +   +++  +  +L+ ++
Sbjct: 93  GYVTYSNVNAVEEMVNMISASRSYQNNIEVMNTAKTLLLKTLQ 135



 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 6/60 (10%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQ 54
          M   FN+  +A  A  QRL+ VA N++N DTV       ++  +V F  +      +   
Sbjct: 3  MLNIFNVSGSAVSAQSQRLNVVASNLANADTVAGPDGKAYKARQVVFQTLPFQQPGEAGT 62


>gi|266621921|ref|ZP_06114856.1| flagellar basal-body rod protein FlgB [Clostridium hathewayi DSM
           13479]
 gi|288866394|gb|EFC98692.1| flagellar basal-body rod protein FlgB [Clostridium hathewayi DSM
           13479]
          Length = 118

 Score = 54.1 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/107 (14%), Positives = 29/107 (27%), Gaps = 12/107 (11%)

Query: 10  AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69
           +   A+  +      N++N +T GF+  KV+F +V+    +        V          
Sbjct: 14  SGLDAMWLKQQVAGHNIANVETPGFKAKKVEFKQVLKEAADGSGPVYKAVVGTDNDTEAR 73

Query: 70  VGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVS 116
                    + +  L                T          G L +
Sbjct: 74  PDGNNVQVEKEELDL------------WKAYTEYSAMTSRMSGKLST 108


>gi|94987189|ref|YP_595122.1| flagellar hook-associated protein [Lawsonia intracellularis
          PHE/MN1-00]
 gi|94731438|emb|CAJ54801.1| Flagellar hook-associated protein [Lawsonia intracellularis
          PHE/MN1-00]
          Length = 705

 Score = 54.1 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 32/77 (41%), Gaps = 2/77 (2%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG--AIKNDIDQKISFV 59
           T F IG +A    +  L+   +N++N +T G+    V+F +  G       + Q +   
Sbjct: 4  NTLFGIGKSAIAGNQTALNVTGNNIANVNTQGYSRQSVRFEDRYGLNQTPGMLGQGVHTA 63

Query: 60 ASGKEYLSKEVGSFIST 76
             + +      ++++ 
Sbjct: 64 EIYRNFNRFVEDAYLNR 80



 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/158 (11%), Positives = 40/158 (25%), Gaps = 8/158 (5%)

Query: 82  FALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFN 141
            AL  + +F       + +  D         +    +         S+  ++        
Sbjct: 553 AALGINTFFQGSDATDMAIKPDVIQNTNFINAGKVNANGEVSTGDNSIAKELADLATKEV 612

Query: 142 VGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLED 201
               G  +    + A  G          V    S                  +++  L  
Sbjct: 613 TISTGWETTHQTLGAYYG--------ALVGLVGSDTRTAKFNADYNKTLSNELEQQALSI 664

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +  N   EM Q+I     + +   LI   ++ +   + 
Sbjct: 665 TGVNLDEEMTQLIKFQHSYTAAAKLITTADQMLQTLLS 702


>gi|312792645|ref|YP_004025568.1| flagellar basal-body rod protein flgc [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312179785|gb|ADQ39955.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 147

 Score = 54.1 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 20/43 (46%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
           + G++   N + + EM  MI  ++ + +  T ++  +  +   
Sbjct: 100 QNGYVNYPNVDIVTEMVNMIEASRSYEANVTALNITKSMITRT 142



 Score = 52.9 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 6/49 (12%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43
          M  + NI  +A  A   R+  +A N++N +T     G  +R   V F E
Sbjct: 3  MFDAINISSSALAAQRVRMDVIAQNIANANTTRTENGQPYRRKVVVFEE 51


>gi|269138588|ref|YP_003295288.1| flagellar hook-associated protein [Edwardsiella tarda EIB202]
 gi|267984248|gb|ACY84077.1| flagellar hook-associated protein [Edwardsiella tarda EIB202]
          Length = 546

 Score = 54.1 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 29/89 (32%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M    N  ++   A +  L+  ++N++N  T G+    V F+E  G            V 
Sbjct: 1  MANLINNAMSGLSAAQTALAVTSNNINNVYTAGYNRQTVSFAENNGTSTPAGFIGNGVVV 60

Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAW 89
          SG      +         + D A      
Sbjct: 61 SGINREYNQFIVNQLRQGQSDLATTSTYH 89


>gi|187925763|ref|YP_001897405.1| flagellar basal body rod protein FlgC [Burkholderia phytofirmans
           PsJN]
 gi|187716957|gb|ACD18181.1| flagellar basal-body rod protein FlgC [Burkholderia phytofirmans
           PsJN]
          Length = 141

 Score = 54.1 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 25/61 (40%)

Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           P    T  +  +      G++   N + + EM  MI  ++ + +    ++  +  ML+ +
Sbjct: 78  PTPMKTAYDPGNPAANSDGYVTLPNVDPVQEMVNMISASRSYQANVETLNTAKTLMLKTL 137

Query: 239 R 239
            
Sbjct: 138 T 138



 Score = 42.9 bits (99), Expect = 0.037,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 6/47 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42
             F +  +A  A  QRL+  A N++N   T G     ++  +V F+
Sbjct: 5  MNIFGVAGSAMSAQSQRLNVTASNLANADSTTGPDGQPYKAKQVVFA 51


>gi|295707173|ref|YP_003600248.1| flagellar hook-associated protein FlgK [Bacillus megaterium DSM
           319]
 gi|294804832|gb|ADF41898.1| flagellar hook-associated protein FlgK [Bacillus megaterium DSM
           319]
          Length = 507

 Score = 54.1 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 8/53 (15%), Positives = 22/53 (41%), Gaps = 5/53 (9%)

Query: 196 RGFLED-----SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           +G +E      S  +   EM  MI     +N+   ++   ++ + + +  + +
Sbjct: 452 QGAVEQRRQSTSAVSLDEEMTNMIQFQHAYNASARMVTMIDEMLDKIVNGLGT 504



 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/89 (14%), Positives = 25/89 (28%), Gaps = 3/89 (3%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDIDQKISFVA 60
             +      A +  L T+  N+SN +T G+   +V    F        N          
Sbjct: 7  GLQVAKRGMDAQQAALYTIGHNVSNANTPGYTRQRVSLETFPAYPAPGMNQTGTAGQIGM 66

Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAW 89
            +    + +          D  ++   W
Sbjct: 67 GVEASTVERIRDTFLDTQYRDETIKVGYW 95


>gi|323527715|ref|YP_004229868.1| flagellar basal-body rod protein FlgC [Burkholderia sp. CCGE1001]
 gi|323384717|gb|ADX56808.1| flagellar basal-body rod protein FlgC [Burkholderia sp. CCGE1001]
          Length = 141

 Score = 54.1 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 25/61 (40%)

Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           P    T  +  +      G++   N + + EM  MI  ++ + +    ++  +  ML+ +
Sbjct: 78  PTPMKTAYDPGNPAANADGYVTLPNVDPVQEMVNMISASRSYQANVETLNTAKTLMLKTL 137

Query: 239 R 239
            
Sbjct: 138 T 138



 Score = 41.8 bits (96), Expect = 0.093,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 32/99 (32%), Gaps = 7/99 (7%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSEVVGAIKNDIDQK 55
              F +  +A  A  QRL+  A N++N   T G     +R  +V F+ V           
Sbjct: 5   MNIFGVAGSAMSAQSQRLNVTASNLANADSTTGPDGQPYRAKQVVFA-VAPLGGARTASG 63

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES 94
                     +  +     +     + A   D +  L +
Sbjct: 64  QQVGGVQVTGVVDDPTPMKTAYDPGNPAANADGYVTLPN 102


>gi|24374760|ref|NP_718803.1| flagellar basal body rod protein FlgC [Shewanella oneidensis MR-1]
 gi|24349426|gb|AAN56247.1|AE015762_4 flagellar basal-body rod protein FlgC [Shewanella oneidensis MR-1]
          Length = 138

 Score = 54.1 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 19/42 (45%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           GF+   N N M EM  MI  ++ +     + +  +  + + +
Sbjct: 93  GFIYKPNVNVMEEMADMISASRSYQMNVQVAEAAKSMLQQTL 134



 Score = 37.5 bits (85), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 22/50 (44%), Gaps = 6/50 (12%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVG 46
            F++  +   A   RL+T A N++N D+V       +R+    F   + 
Sbjct: 5  NIFDVAGSGMSAQSLRLNTTASNIANADSVSSSIDKTYRSRHPIFEAEMA 54


>gi|113969604|ref|YP_733397.1| flagellar basal body rod protein FlgC [Shewanella sp. MR-4]
 gi|114046836|ref|YP_737386.1| flagellar basal body rod protein FlgC [Shewanella sp. MR-7]
 gi|113884288|gb|ABI38340.1| flagellar basal-body rod protein FlgC [Shewanella sp. MR-4]
 gi|113888278|gb|ABI42329.1| flagellar basal-body rod protein FlgC [Shewanella sp. MR-7]
          Length = 138

 Score = 54.1 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 19/42 (45%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           GF+   N N M EM  MI  ++ +     + +  +  + + +
Sbjct: 93  GFIYKPNVNVMEEMADMISASRSYQMNVQVAEAAKSMLQQTL 134



 Score = 36.8 bits (83), Expect = 3.0,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 23/50 (46%), Gaps = 6/50 (12%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVG 46
          + F++  +   A   RL+T A N++N D+V       +R+    F   + 
Sbjct: 5  SIFDVAGSGMSAQSVRLNTTASNIANADSVSSSIDKTYRSRHPIFEAEMA 54


>gi|153001474|ref|YP_001367155.1| flagellar basal body rod protein FlgC [Shewanella baltica OS185]
 gi|160876205|ref|YP_001555521.1| flagellar basal body rod protein FlgC [Shewanella baltica OS195]
 gi|151366092|gb|ABS09092.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS185]
 gi|160861727|gb|ABX50261.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS195]
 gi|315268395|gb|ADT95248.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS678]
          Length = 138

 Score = 54.1 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 19/42 (45%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           GF+   N N M EM  MI  ++ +     + +  +  + + +
Sbjct: 93  GFIYKPNVNVMEEMADMISASRSYQMNVQVAEAAKSMLQQTL 134



 Score = 36.8 bits (83), Expect = 3.0,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 23/50 (46%), Gaps = 6/50 (12%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVG 46
          + F++  +   A   RL+T A N++N D+V       +R+    F   + 
Sbjct: 5  SIFDVAGSGMSAQSVRLNTTASNIANADSVSSSVDKTYRSRHPIFEAEMA 54


>gi|126175148|ref|YP_001051297.1| flagellar basal body rod protein FlgC [Shewanella baltica OS155]
 gi|125998353|gb|ABN62428.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS155]
          Length = 138

 Score = 54.1 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 19/42 (45%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           GF+   N N M EM  MI  ++ +     + +  +  + + +
Sbjct: 93  GFIYKPNVNVMEEMADMISASRSYQMNVQVAEAAKSMLQQTL 134



 Score = 37.2 bits (84), Expect = 1.9,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 22/50 (44%), Gaps = 6/50 (12%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVG 46
          + F++  +   A   RL+T A N++N D+V       +R     F   + 
Sbjct: 5  SIFDVAGSGMSAQSVRLNTTASNIANADSVSSSVDKTYRARHPIFEAEMA 54


>gi|332530688|ref|ZP_08406619.1| flagellar basal body rod protein [Hylemonella gracilis ATCC
          19624]
 gi|332039856|gb|EGI76251.1| flagellar basal body rod protein [Hylemonella gracilis ATCC
          19624]
          Length = 101

 Score = 54.1 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 24/43 (55%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
          M +  +IG++   A + RL + A N++N +T GF+   V   +
Sbjct: 2  MASLSSIGISGLQAAQLRLDSSAHNVANLNTPGFKRQTVTQQD 44


>gi|322382305|ref|ZP_08056212.1| flagellar basal body rod protein FlgC-like protein [Paenibacillus
           larvae subsp. larvae B-3650]
 gi|321153658|gb|EFX46033.1| flagellar basal body rod protein FlgC-like protein [Paenibacillus
           larvae subsp. larvae B-3650]
          Length = 129

 Score = 54.1 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 33/101 (32%), Gaps = 9/101 (8%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKR---------G 197
              +K  V+      +   +     +  +G    +     +      V           G
Sbjct: 25  PYQRKMVVVEPKNQTNFAQNLQNAMKNGTGQGVRVSNIVGDQTPFKRVYNPVHPDSDADG 84

Query: 198 FLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           ++   N +   EM  MI  T+ + +  T ++  +  + +A+
Sbjct: 85  YVYMPNVDIQKEMVDMISATRSYEANVTALNATKGMITKAL 125


>gi|148270547|ref|YP_001245007.1| flagellar basal-body rod protein FlgC [Thermotoga petrophila RKU-1]
 gi|170289253|ref|YP_001739491.1| flagellar basal-body rod protein FlgC [Thermotoga sp. RQ2]
 gi|147736091|gb|ABQ47431.1| flagellar basal-body rod protein FlgC [Thermotoga petrophila RKU-1]
 gi|170176756|gb|ACB09808.1| flagellar basal-body rod protein FlgC [Thermotoga sp. RQ2]
          Length = 140

 Score = 54.1 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N + EM  +I+  + +++     +  +  +  A++
Sbjct: 94  GYVRMPNVNIVREMVDLINAQRAYDANVAAFNVTKAMVNSALQ 136



 Score = 45.6 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 21/53 (39%), Gaps = 6/53 (11%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDT----VG--FRTIKVKFSEVVGAIKND 51
           NI      A   R+  V+ N++N +T     G  +R     F+E +    N 
Sbjct: 8  MNISATGMSAQRLRVEIVSTNIANAETTRTETGEPYRRKVPVFAEYLRRTPNG 60


>gi|15644117|ref|NP_229166.1| flagellar basal-body rod protein FlgC [Thermotoga maritima MSB8]
 gi|281412855|ref|YP_003346934.1| flagellar basal-body rod protein FlgC [Thermotoga naphthophila
           RKU-10]
 gi|4981925|gb|AAD36435.1|AE001790_7 flagellar basal-body rod protein FlgC [Thermotoga maritima MSB8]
 gi|281373958|gb|ADA67520.1| flagellar basal-body rod protein FlgC [Thermotoga naphthophila
           RKU-10]
          Length = 140

 Score = 53.7 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N + EM  +I+  + +++     +  +  +  A++
Sbjct: 94  GYVRMPNVNIVREMVDLINAQRAYDANVAAFNVTKAMVNSALQ 136



 Score = 45.2 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 21/53 (39%), Gaps = 6/53 (11%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDT----VG--FRTIKVKFSEVVGAIKND 51
           NI      A   R+  V+ N++N +T     G  +R     F+E +    N 
Sbjct: 8  MNISATGMSAQRLRVEIVSTNIANAETTRTETGEPYRRKVPVFAEYLRRTPNG 60


>gi|295096227|emb|CBK85317.1| flagellar basal-body rod protein FlgC [Enterobacter cloacae subsp.
           cloacae NCTC 9394]
          Length = 134

 Score = 53.7 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 6/45 (13%), Positives = 22/45 (48%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             G+++  N + + EM   +  ++ + +   +++  +  ML+ + 
Sbjct: 87  ASGYVKMPNVDVVGEMVNSMSASRSYQANVEVLNTVKSMMLKTLT 131



 Score = 39.5 bits (90), Expect = 0.48,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 6/47 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42
             F+I  +A  A  +RL+  A N++N     G     +R  +V F 
Sbjct: 4  LNIFDIAGSALTAQSKRLNVAASNLANADSVTGPDGQPYRAKQVVFQ 50


>gi|291534844|emb|CBL07956.1| flagellar hook-associated protein FlgK [Roseburia intestinalis
          M50/1]
          Length = 589

 Score = 53.7 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 23/40 (57%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
          S  IG+A   + +  L+  ++N++N DT G+    V F++
Sbjct: 7  SMFIGVAGLQSSQNALNVTSNNLANLDTTGYVRQSVLFAD 46



 Score = 37.5 bits (85), Expect = 1.6,   Method: Composition-based stats.
 Identities = 7/39 (17%), Positives = 16/39 (41%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            +S  E+  MI     +N+ +  I+   + +   I  + 
Sbjct: 551 VSSDEELTYMIKYQNAYNASSRFINVINEMIEHLITQLG 589


>gi|170755438|ref|YP_001782346.1| flagellar hook-associated protein FlgK [Clostridium botulinum B1
          str. Okra]
 gi|169120650|gb|ACA44486.1| flagellar hook-associated protein FlgK [Clostridium botulinum B1
          str. Okra]
          Length = 621

 Score = 53.7 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 21/39 (53%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
           NIG +   A +  L+T + N++N +T G+   +V+   
Sbjct: 8  LNIGKSGMFAQQGALNTTSHNIANANTEGYSRQRVELQT 46



 Score = 39.5 bits (90), Expect = 0.39,   Method: Composition-based stats.
 Identities = 4/40 (10%), Positives = 14/40 (35%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           S  +   E   ++     + +   +I   ++ +   I  +
Sbjct: 580 SGVSMDEEFANLVQFNHCYQANAKIISTVDQLLDVVINGL 619


>gi|299068730|emb|CBJ39969.1| FlgC: Flagellar basal-body rod protein [Ralstonia solanacearum
           CMR15]
          Length = 129

 Score = 53.7 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 20/43 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N + + EM  MI  ++ + +   + +  +    +A+ 
Sbjct: 84  GYVTMPNVDVVDEMVNMISASRSYQANVEVANTTKTMAAKALT 126



 Score = 37.5 bits (85), Expect = 1.4,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 23/44 (52%), Gaps = 6/44 (13%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDT------VGFRTIKVKFS 42
           ++  +A  A  +R++ VA N++N ++        +R  +V FS
Sbjct: 1  MDVAGSALTAQSKRMNVVASNLANAESVTGPDGTAYRAKQVVFS 44


>gi|260574405|ref|ZP_05842409.1| flagellar basal-body rod protein FlgC [Rhodobacter sp. SW2]
 gi|259023301|gb|EEW26593.1| flagellar basal-body rod protein FlgC [Rhodobacter sp. SW2]
          Length = 126

 Score = 53.7 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 26/78 (33%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
            S  +  +   A   RL  V++N++N DT G+    + F E +     +        + 
Sbjct: 5  LQSLTMAASGMEAQAMRLRHVSENIANADTPGYHRKTMSFQEAMDGGTVEAGPVRLDRSE 64

Query: 62 GKEYLSKEVGSFISTGTE 79
            +           TG  
Sbjct: 65 LVKIYDPGHPLADETGHY 82



 Score = 42.9 bits (99), Expect = 0.034,   Method: Composition-based stats.
 Identities = 4/37 (10%), Positives = 13/37 (35%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
            SN + + E+       + + +   + D+  +     
Sbjct: 84  GSNVDLVIEIADAREAQRSYEANLKMFDQARQMTQSL 120


>gi|167465320|ref|ZP_02330409.1| flagellar basal body rod protein FlgC [Paenibacillus larvae subsp.
           larvae BRL-230010]
          Length = 149

 Score = 53.7 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 33/101 (32%), Gaps = 9/101 (8%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKR---------G 197
              +K  V+      +   +     +  +G    +     +      V           G
Sbjct: 45  PYQRKMVVVEPKNQTNFAQNLQNAMKNGTGQGVRVSNIVGDQTPFKRVYNPVHPDSDADG 104

Query: 198 FLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           ++   N +   EM  MI  T+ + +  T ++  +  + +A+
Sbjct: 105 YVYMPNVDIQKEMVDMISATRSYEANVTALNATKGMITKAL 145



 Score = 40.2 bits (92), Expect = 0.24,   Method: Composition-based stats.
 Identities = 8/30 (26%), Positives = 16/30 (53%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV 32
            F+I  +A  A   R+  ++ N++N D+ 
Sbjct: 5  NGFDISSSALTAQRLRMDVISSNIANADST 34


>gi|258592507|emb|CBE68816.1| flagellar basal-body rod protein FlgC (cell-proximal rod protein)
           [NC10 bacterium 'Dutch sediment']
          Length = 140

 Score = 53.7 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 7/42 (16%), Positives = 20/42 (47%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N N + EM  ++  ++ + +  + I   +  M + +
Sbjct: 95  GYVAMPNINPVMEMVDLMSASRAYEANISAIQIAKSMMTKTL 136



 Score = 35.2 bits (79), Expect = 7.9,   Method: Composition-based stats.
 Identities = 9/32 (28%), Positives = 16/32 (50%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32
          M  S  I   A  A   R++ +A+N++N +  
Sbjct: 1  MFASMEINATALAAQRVRMNLIAENLANAEVT 32


>gi|300854137|ref|YP_003779121.1| Flagellar hook-associated protein [Clostridium ljungdahlii DSM
          13528]
 gi|300434252|gb|ADK14019.1| Flagellar hook-associated protein [Clostridium ljungdahlii DSM
          13528]
          Length = 638

 Score = 53.7 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 18/41 (43%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
          + FN   +   A +  ++  + N++N +T G+   +     
Sbjct: 6  SIFNTAKSGLFAQQTAINVTSHNIANANTDGYSRQRADMET 46



 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 6/41 (14%), Positives = 16/41 (39%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           +S  +   EM  +I     + +   +I   ++ +   I  +
Sbjct: 596 NSGVSIDEEMTNLIQFQHCYQANAKMISTVDELLDVVINQL 636


>gi|302878274|ref|YP_003846838.1| flagellar basal-body rod protein FlgC [Gallionella
           capsiferriformans ES-2]
 gi|302581063|gb|ADL55074.1| flagellar basal-body rod protein FlgC [Gallionella
           capsiferriformans ES-2]
          Length = 134

 Score = 53.7 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 23/43 (53%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N + EM  MI  ++ + +   +++ ++  +L+ + 
Sbjct: 89  GYVSMPNVNVVDEMVNMISASRAYQNNVDVLNTSKTLLLKTLT 131



 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 39/120 (32%), Gaps = 6/120 (5%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSEVVGAIKNDIDQKI 56
             FN+  +   A  QRL+ VA N++N   T G     +R  +V FS       +    K+
Sbjct: 5   NIFNVAGSGMAAQSQRLNVVASNLANADSTTGADGKPYRAKQVVFSATPMGSTDVQGVKV 64

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVS 116
             VA     +               +    +     E    I  +R  +  V    +  +
Sbjct: 65  VRVAEDTSPMKIVYDPKHPMADAKGYVSMPNVNVVDEMVNMISASRAYQNNVDVLNTSKT 124


>gi|312876494|ref|ZP_07736477.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|311796705|gb|EFR13051.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor
           lactoaceticus 6A]
          Length = 147

 Score = 53.7 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 20/43 (46%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
           + G++   N + + EM  MI  ++ + +  T ++  +  +   
Sbjct: 100 QNGYVNYPNVDIVTEMVNMIEASRSYEANVTALNITKSMITRT 142



 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 6/49 (12%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43
          M  + NI  +A  A   R+  +A N++N +T     G  +R   V F E
Sbjct: 3  MFDAINISSSALAAQRVRMDVIAQNIANANTTRTENGQPYRRKVVVFEE 51


>gi|74101664|gb|AAZ99754.1| FlgKL [Aeromonas hydrophila]
          Length = 437

 Score = 53.7 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 28/59 (47%), Gaps = 2/59 (3%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV--VGAIKNDIDQKISFVA 60
            NIG +   A +  L+  A N++N +T+G+   +     +   G + N +  +++ V 
Sbjct: 1  MLNIGFSGLNAAQIALNVTAQNIANVNTIGYSRQEAMMGSLSGFGRLDNGMGVEVTGVR 59



 Score = 39.1 bits (89), Expect = 0.53,   Method: Composition-based stats.
 Identities = 5/38 (13%), Positives = 17/38 (44%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           S  N+  E  +++  T+ + +   +I  +++     + 
Sbjct: 398 SGVNTDEEGVKIMAYTKAYQANAKVISTSDQLFNSILN 435


>gi|262404542|ref|ZP_06081097.1| flagellar basal-body rod protein FlgC [Vibrio sp. RC586]
 gi|262349574|gb|EEY98712.1| flagellar basal-body rod protein FlgC [Vibrio sp. RC586]
          Length = 138

 Score = 53.7 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 23/43 (53%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N M EM  MI  ++ + +   + D +++ +L  ++
Sbjct: 93  GYIYKPNVNVMEEMANMISASRSYQTNVQVADASKQMLLRTLQ 135


>gi|253998490|ref|YP_003050553.1| flagellar basal-body rod protein FlgC [Methylovorus sp. SIP3-4]
 gi|313200565|ref|YP_004039223.1| flagellar basal-body rod protein flgc [Methylovorus sp. MP688]
 gi|253985169|gb|ACT50026.1| flagellar basal-body rod protein FlgC [Methylovorus sp. SIP3-4]
 gi|312439881|gb|ADQ83987.1| flagellar basal-body rod protein FlgC [Methylovorus sp. MP688]
          Length = 134

 Score = 53.7 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 8/45 (17%), Positives = 21/45 (46%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +G++   N N   EM  MI  ++ + +    ++  +  +L+ + 
Sbjct: 87  AQGYVTMPNVNVTEEMVNMISASRAYQNNVETMNAAKTMLLKTLT 131



 Score = 37.5 bits (85), Expect = 1.5,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 34/106 (32%), Gaps = 6/106 (5%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDT----VG--FRTIKVKFSEVVGAIKNDIDQKI 56
             FN+  +A  A  QRL+ VA N++N D+     G  ++  +V FS            K+
Sbjct: 5   NVFNVSGSAMSAQSQRLNAVASNLANADSATSANGQPYKAKQVVFSATPTNNAAVSGVKV 64

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTR 102
             V                      +    +     E    I  +R
Sbjct: 65  QQVIEDPSPPKVVYDPKHPAANAQGYVTMPNVNVTEEMVNMISASR 110


>gi|217972596|ref|YP_002357347.1| flagellar basal body rod protein FlgC [Shewanella baltica OS223]
 gi|304409980|ref|ZP_07391599.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS183]
 gi|307302307|ref|ZP_07582065.1| flagellar basal-body rod protein FlgC [Shewanella baltica BA175]
 gi|217497731|gb|ACK45924.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS223]
 gi|304351389|gb|EFM15788.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS183]
 gi|306914345|gb|EFN44766.1| flagellar basal-body rod protein FlgC [Shewanella baltica BA175]
          Length = 138

 Score = 53.7 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 19/42 (45%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           GF+   N N M EM  MI  ++ +     + +  +  + + +
Sbjct: 93  GFIYKPNVNVMEEMADMISASRSYQMNVQVAEAAKSMLQQTL 134



 Score = 36.4 bits (82), Expect = 3.3,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 23/50 (46%), Gaps = 6/50 (12%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVG 46
          + F++  +   A   RL+T A N++N D+V       +R+    F   + 
Sbjct: 5  SIFDVAGSGMSAQSVRLNTTASNIANADSVSSSVDKTYRSRHPIFEAEMA 54


>gi|153213630|ref|ZP_01948903.1| flagellar basal-body rod protein FlgC [Vibrio cholerae 1587]
 gi|153825350|ref|ZP_01978017.1| flagellar basal-body rod protein FlgC [Vibrio cholerae MZO-2]
 gi|153829337|ref|ZP_01982004.1| flagellar basal-body rod protein FlgC [Vibrio cholerae 623-39]
 gi|183179563|ref|ZP_02957774.1| flagellar basal-body rod protein FlgC [Vibrio cholerae MZO-3]
 gi|229513843|ref|ZP_04403305.1| flagellar basal-body rod protein FlgC [Vibrio cholerae TMA 21]
 gi|229522148|ref|ZP_04411565.1| flagellar basal-body rod protein FlgC [Vibrio cholerae TM 11079-80]
 gi|229524194|ref|ZP_04413599.1| flagellar basal-body rod protein FlgC [Vibrio cholerae bv. albensis
           VL426]
 gi|229528796|ref|ZP_04418186.1| flagellar basal-body rod protein FlgC [Vibrio cholerae 12129(1)]
 gi|254286492|ref|ZP_04961449.1| flagellar basal-body rod protein FlgC [Vibrio cholerae AM-19226]
 gi|258621047|ref|ZP_05716081.1| Flagellar basal-body rod protein flgC [Vibrio mimicus VM573]
 gi|258625275|ref|ZP_05720183.1| Flagellar basal-body rod protein flgC [Vibrio mimicus VM603]
 gi|261211324|ref|ZP_05925612.1| flagellar basal-body rod protein FlgC [Vibrio sp. RC341]
 gi|262170823|ref|ZP_06038501.1| flagellar basal-body rod protein FlgC [Vibrio mimicus MB-451]
 gi|262191691|ref|ZP_06049867.1| flagellar basal-body rod protein FlgC [Vibrio cholerae CT 5369-93]
 gi|297580845|ref|ZP_06942770.1| flagellar basal-body rod protein FlgC [Vibrio cholerae RC385]
 gi|124115829|gb|EAY34649.1| flagellar basal-body rod protein FlgC [Vibrio cholerae 1587]
 gi|148875178|gb|EDL73313.1| flagellar basal-body rod protein FlgC [Vibrio cholerae 623-39]
 gi|149741034|gb|EDM55103.1| flagellar basal-body rod protein FlgC [Vibrio cholerae MZO-2]
 gi|150423441|gb|EDN15385.1| flagellar basal-body rod protein FlgC [Vibrio cholerae AM-19226]
 gi|183012974|gb|EDT88274.1| flagellar basal-body rod protein FlgC [Vibrio cholerae MZO-3]
 gi|229332570|gb|EEN98056.1| flagellar basal-body rod protein FlgC [Vibrio cholerae 12129(1)]
 gi|229337775|gb|EEO02792.1| flagellar basal-body rod protein FlgC [Vibrio cholerae bv. albensis
           VL426]
 gi|229341073|gb|EEO06078.1| flagellar basal-body rod protein FlgC [Vibrio cholerae TM 11079-80]
 gi|229349024|gb|EEO13981.1| flagellar basal-body rod protein FlgC [Vibrio cholerae TMA 21]
 gi|258582448|gb|EEW07289.1| Flagellar basal-body rod protein flgC [Vibrio mimicus VM603]
 gi|258586435|gb|EEW11150.1| Flagellar basal-body rod protein flgC [Vibrio mimicus VM573]
 gi|260839279|gb|EEX65905.1| flagellar basal-body rod protein FlgC [Vibrio sp. RC341]
 gi|261891899|gb|EEY37885.1| flagellar basal-body rod protein FlgC [Vibrio mimicus MB-451]
 gi|262032430|gb|EEY50992.1| flagellar basal-body rod protein FlgC [Vibrio cholerae CT 5369-93]
 gi|297534671|gb|EFH73507.1| flagellar basal-body rod protein FlgC [Vibrio cholerae RC385]
 gi|327484718|gb|AEA79125.1| Flagellar basal-body rod protein FlgC [Vibrio cholerae LMA3894-4]
          Length = 138

 Score = 53.7 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 23/43 (53%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N M EM  MI  ++ + +   + D +++ +L  ++
Sbjct: 93  GYIYKPNVNVMEEMANMISASRSYQTNVQVADASKQMLLRTLQ 135


>gi|295401181|ref|ZP_06811154.1| flagellar hook-associated protein FlgK [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|294976774|gb|EFG52379.1| flagellar hook-associated protein FlgK [Geobacillus
           thermoglucosidasius C56-YS93]
          Length = 530

 Score = 53.7 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 19/41 (46%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S+ +   EM  MI     +N+   +I   ++ + + I N+ 
Sbjct: 486 SSVSLDEEMTNMIKFQHAYNAAARMITAIDEMLDKIINNMG 526



 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 21/46 (45%), Gaps = 3/46 (6%)

Query: 1  MQTSFN---IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
          M ++F+   +        +  L   A N++N +T G+   +V F E
Sbjct: 1  MLSTFHGLEVAKRGMFTQQAALYVTAHNIANANTPGYSRQRVNFVE 46


>gi|238782790|ref|ZP_04626819.1| Flagellar basal-body rod protein flgC [Yersinia bercovieri ATCC
           43970]
 gi|238716213|gb|EEQ08196.1| Flagellar basal-body rod protein flgC [Yersinia bercovieri ATCC
           43970]
          Length = 121

 Score = 53.7 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N + EM   I  ++ + +   +++  +  ML+ + 
Sbjct: 76  GYVRMPNVNVVSEMVNTISASRSYQANVEVLNTAKSMMLKTLT 118


>gi|326202857|ref|ZP_08192724.1| flagellar hook-associated protein FlgK [Clostridium papyrosolvens
           DSM 2782]
 gi|325986934|gb|EGD47763.1| flagellar hook-associated protein FlgK [Clostridium papyrosolvens
           DSM 2782]
          Length = 544

 Score = 53.7 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/229 (12%), Positives = 69/229 (30%), Gaps = 18/229 (7%)

Query: 32  VGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA 91
             ++    +F +      N+   K +   +  +    +   +    T+ + A  G  +F 
Sbjct: 314 PYYQKKLNEFVQTFAIAFNEGYTKTNSGYAHTDVGHIDGYGYDPDLTDANTAPTGIRFFT 373

Query: 92  LESPRGIILTRDGRF--------------KVTDDGSLVSASGKYPVLDMASVPIQIPQKD 137
           +       ++                   +V      ++A       D+   P  I   +
Sbjct: 374 MLGVGNTPISSADLIAGVTVGKSDPDYINQVAQQYKQITAKNFSVSSDIIDNPNNIAASE 433

Query: 138 EIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRG 197
                G  G + +   +     L+     + F++   +G+  +        ++  T+ R 
Sbjct: 434 TTGQNGNTGVLKKLMGIRTNQSLFKEGAPEDFMKSLVAGMGIDAQQAETFAITQDTLVRQ 493

Query: 198 F----LEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
                +  S  N   EM  MI   Q +N+   +I    +     I  + 
Sbjct: 494 VDNRRMSVSGVNLNEEMTNMIKFQQSYNAAARMIVTMGQIYDTLINKLG 542



 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 23/80 (28%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
            NI L+     ++ L TV  N+SN  T G+   +   S        D    +   +   
Sbjct: 7  GLNIALSGLYTAQRNLDTVGHNLSNATTPGYSRQQTIQSASNPLAVLDGTGMVGTGSQAT 66

Query: 64 EYLSKEVGSFISTGTELDFA 83
                           + A
Sbjct: 67 GVQRIRDSYLDFKYWSENVA 86


>gi|254445805|ref|ZP_05059281.1| flagellar hook-associated protein FlgK [Verrucomicrobiae bacterium
           DG1235]
 gi|198260113|gb|EDY84421.1| flagellar hook-associated protein FlgK [Verrucomicrobiae bacterium
           DG1235]
          Length = 486

 Score = 53.7 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 16/40 (40%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           S  +   EM  M+   + F +   LI   ++ +   +  +
Sbjct: 446 SGVSIDEEMTDMMKFQRAFQATGKLIQTIDEMLDVIVNRL 485


>gi|89056688|ref|YP_512139.1| flagellar basal body rod protein FlgC [Jannaschia sp. CCS1]
 gi|88866237|gb|ABD57114.1| flagellar basal-body rod protein FlgC [Jannaschia sp. CCS1]
          Length = 130

 Score = 53.7 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 12/81 (14%), Positives = 31/81 (38%), Gaps = 2/81 (2%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKF--SEVVGAIKNDIDQKISFVA 60
           + ++  +   A  QRL+ V++N++N DT G++     F       A++  +      + 
Sbjct: 6  NALSVAASGMRAQTQRLTHVSENIANADTPGYQRKITSFEVERGFSAVEGQVRTGPVRLD 65

Query: 61 SGKEYLSKEVGSFISTGTELD 81
               +  +    ++      
Sbjct: 66 QTALPVIFDPSHPMADEAGSY 86



 Score = 42.2 bits (97), Expect = 0.067,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 163 VDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222
               +G VR     +     P   +    +  + G  E SN + + E+       + + +
Sbjct: 50  FSAVEGQVRTGPVRLDQTALPVIFDPSHPMADEAGSYEGSNVDLVIELADAREANRSYEA 109

Query: 223 ITTLIDENEKSMLEAIRNI 241
              + D+  + M  ++ ++
Sbjct: 110 NLRIFDQIRQ-MSSSLNDL 127


>gi|237796175|ref|YP_002863727.1| flagellar hook-associated protein FlgK [Clostridium botulinum Ba4
          str. 657]
 gi|229264184|gb|ACQ55217.1| flagellar hook-associated protein FlgK [Clostridium botulinum Ba4
          str. 657]
          Length = 622

 Score = 53.7 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 21/39 (53%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
           NIG +   A +  L+T + N++N +T G+   +V+   
Sbjct: 8  LNIGKSGMFAQQGALNTTSHNIANANTEGYSRQRVELQT 46



 Score = 39.5 bits (90), Expect = 0.44,   Method: Composition-based stats.
 Identities = 4/40 (10%), Positives = 14/40 (35%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           S  +   E   ++     + +   +I   ++ +   I  +
Sbjct: 581 SGVSMDEEFANLVQFNHCYQANAKIISTVDQLLDVVINGL 620


>gi|168183196|ref|ZP_02617860.1| flagellar hook-associated protein FlgK [Clostridium botulinum Bf]
 gi|182673575|gb|EDT85536.1| flagellar hook-associated protein FlgK [Clostridium botulinum Bf]
          Length = 622

 Score = 53.7 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 21/39 (53%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
           NIG +   A +  L+T + N++N +T G+   +V+   
Sbjct: 8  LNIGKSGMFAQQGALNTTSHNIANANTEGYSRQRVELQT 46



 Score = 39.5 bits (90), Expect = 0.44,   Method: Composition-based stats.
 Identities = 4/40 (10%), Positives = 14/40 (35%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           S  +   E   ++     + +   +I   ++ +   I  +
Sbjct: 581 SGVSMDEEFANLVQFNHCYQANAKIISTVDQLLDVVINGL 620


>gi|297538894|ref|YP_003674663.1| flagellar basal-body rod protein FlgC [Methylotenera sp. 301]
 gi|297258241|gb|ADI30086.1| flagellar basal-body rod protein FlgC [Methylotenera sp. 301]
          Length = 135

 Score = 53.7 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 20/43 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N   EM  MI  ++ + +    ++  +  +L+ + 
Sbjct: 89  GYVTMPNVNVTEEMVNMISASRAYQNNVETMNAAKTMLLKTLT 131



 Score = 41.4 bits (95), Expect = 0.099,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 36/107 (33%), Gaps = 8/107 (7%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTD-------TVGFRTIKVKFSEVVGAIKNDIDQK 55
             FNI  +A  A  QRL+TVA N++N D       T  ++  +V FS       +    K
Sbjct: 5   NVFNISGSAMSAQAQRLNTVASNLANADSATSANGTP-YKAKQVVFSATPTGSPDASGVK 63

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTR 102
           +  V                   +  +    +     E    I  +R
Sbjct: 64  VLKVIEDNSPAKVVYDPKHPLANDKGYVTMPNVNVTEEMVNMISASR 110


>gi|126697802|ref|YP_001086699.1| putative flagellar hook-associated protein [Clostridium difficile
          630]
 gi|115249239|emb|CAJ67052.1| Flagellar hook-associated protein FlgK (or HAP1) [Clostridium
          difficile]
          Length = 436

 Score = 53.7 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 33/77 (42%), Gaps = 4/77 (5%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE----VVGAIKNDIDQKISF 58
          +  N   +   A ++ + T++ N+SN DT G+   + +F+      + ++ N I +    
Sbjct: 6  SILNTANSGMNAHQKSIQTISHNISNLDTDGYSRQRTEFATNSPMYMPSLSNSIGRGQLG 65

Query: 59 VASGKEYLSKEVGSFIS 75
                 +++   SF  
Sbjct: 66 TGVHVTDVTRARNSFYD 82



 Score = 49.1 bits (115), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 5/40 (12%), Positives = 17/40 (42%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           S  +   EM +++ + + + +   ++    + +   I  I
Sbjct: 396 SGVSLDEEMTELMKVQRSYQASAKVMSTAVQLLDVVINGI 435


>gi|330720177|gb|EGG98566.1| Flagellar basal-body rod protein FlgC [gamma proteobacterium
           IMCC2047]
          Length = 150

 Score = 53.7 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N + + EM  MI  ++ + +   +++  ++ M   + 
Sbjct: 105 GYVYYPNVDVVTEMADMISASRAYQTNVEIMNTAKQMMQRVLT 147


>gi|295678060|ref|YP_003606584.1| flagellar basal-body rod protein FlgC [Burkholderia sp. CCGE1002]
 gi|295437903|gb|ADG17073.1| flagellar basal-body rod protein FlgC [Burkholderia sp. CCGE1002]
          Length = 141

 Score = 53.7 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 26/61 (42%)

Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           P+   T  +  +      G++   N + + EM  MI  ++ + +    ++  +  ML+ +
Sbjct: 78  PSPMKTAYDPGNPAADANGYVTLPNVDPVQEMVNMISASRSYQANVETLNTAKTLMLKTL 137

Query: 239 R 239
            
Sbjct: 138 T 138



 Score = 41.4 bits (95), Expect = 0.097,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 6/47 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42
             F +  +A  A  +RL+  A N++N   T G     ++  +V F+
Sbjct: 5  MNIFGVAGSAMSAQSERLNVTASNLANADSTTGPDGQPYKAKQVIFA 51


>gi|239907806|ref|YP_002954547.1| putative flagellar basal-body rod protein [Desulfovibrio magneticus
           RS-1]
 gi|239797672|dbj|BAH76661.1| putative flagellar basal-body rod protein [Desulfovibrio magneticus
           RS-1]
          Length = 128

 Score = 53.7 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 11/69 (15%), Positives = 23/69 (33%)

Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
           VR  + G       +            G +E SN +   +   MI  ++ F +    I  
Sbjct: 56  VRDASPGGYQPESVSAYNQAGVYEPSAGLVETSNVDLARQTVDMIQTSRAFEANVVTIRS 115

Query: 230 NEKSMLEAI 238
            ++ +   +
Sbjct: 116 QDQMLGTLL 124



 Score = 48.3 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 21/43 (48%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
          M  + +   +A  A    ++  A+N++N +T G+++   +   
Sbjct: 1  MTDAISAAQSALSAFSTSMAVTANNVANVNTDGYKSQDARLET 43


>gi|226327748|ref|ZP_03803266.1| hypothetical protein PROPEN_01621 [Proteus penneri ATCC 35198]
 gi|225203452|gb|EEG85806.1| hypothetical protein PROPEN_01621 [Proteus penneri ATCC 35198]
          Length = 134

 Score = 53.7 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 6/42 (14%), Positives = 20/42 (47%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N + + EM   I  ++ + +   +++  +  M + +
Sbjct: 89  GYVRMPNVDVVGEMINTISASRSYQANVEVMNTAKSLMQKTL 130



 Score = 36.4 bits (82), Expect = 3.8,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 31/79 (39%), Gaps = 6/79 (7%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56
          + F+I  +A  A  QRL+  A NM+N D+V       +R  +V F     A +     ++
Sbjct: 5  SIFDISGSALSAQSQRLNVSASNMANADSVAGPDGEPYRAKQVVFQVNAPAGQEVGGVRV 64

Query: 57 SFVASGKEYLSKEVGSFIS 75
          + V         E      
Sbjct: 65 TEVVDDPAPFRMEYQPGHP 83


>gi|187926956|ref|YP_001893301.1| flagellar basal-body rod protein FlgC [Ralstonia pickettii 12J]
 gi|241665285|ref|YP_002983644.1| flagellar basal-body rod protein FlgC [Ralstonia pickettii 12D]
 gi|187728710|gb|ACD29874.1| flagellar basal-body rod protein FlgC [Ralstonia pickettii 12J]
 gi|240867312|gb|ACS64972.1| flagellar basal-body rod protein FlgC [Ralstonia pickettii 12D]
          Length = 135

 Score = 53.7 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 20/43 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N + + EM  MI  ++ + +   + +  +    +A+ 
Sbjct: 90  GYVTMPNVDVVDEMVNMISASRSYQANVEVANTTKTMAAKALT 132



 Score = 37.9 bits (86), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 32/86 (37%), Gaps = 8/86 (9%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNT------DTVGFRTIKVKFSEVVGAIKNDIDQKI 56
             ++  +A  A  +R++ VA N++N       +   +R  +V F+ V     +D    +
Sbjct: 5  KVMDVAGSALTAQSKRMNVVASNLANAESVTGPNGTAYRAKQVVFTPV--QESDDYATGV 62

Query: 57 SFVASGKEYLSKEVGSFISTGTELDF 82
          S     ++ ++             D 
Sbjct: 63 SVDRVVEDTVTPMKRMHQPGNPLADA 88


>gi|302871568|ref|YP_003840204.1| flagellar hook-associated protein FlgK [Caldicellulosiruptor
           obsidiansis OB47]
 gi|302574427|gb|ADL42218.1| flagellar hook-associated protein FlgK [Caldicellulosiruptor
           obsidiansis OB47]
          Length = 525

 Score = 53.7 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/192 (10%), Positives = 56/192 (29%), Gaps = 11/192 (5%)

Query: 51  DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTD 110
            I   ++ +    + L ++     + G  L+    G  +F     +     R  +     
Sbjct: 341 GIPYYLNRLNEFAQKLIEKFNELHTQGWSLNGQNTGINFFEPPVGQTFFYARYIKVSDAI 400

Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170
              L + +  Y   ++      +    ++ N     +  +    + ++       SQG  
Sbjct: 401 MNDLNNIATTYDASNLPGGNDLVVDMLKLRNDTSIFKEGKFEDFLKSLISNLGVDSQG-- 458

Query: 171 RRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
                  + N      +  +      G       +   EM  +I     F +   +I+  
Sbjct: 459 ---AKNFAENQKVMVTQLDNRRQAVSG------VSIDEEMTNLIKYQHGFQASARMINAF 509

Query: 231 EKSMLEAIRNIA 242
           ++ +   +  + 
Sbjct: 510 DEMLDVIVNRLG 521



 Score = 43.3 bits (100), Expect = 0.030,   Method: Composition-based stats.
 Identities = 11/77 (14%), Positives = 21/77 (27%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
             I         + L   + N++N  T G+    +       + K         V  G 
Sbjct: 5  GLEIARTGIFVNRKGLEVTSHNVANASTPGYTRQVLNVKSNPPSSKVGFYSPKFQVGMGA 64

Query: 64 EYLSKEVGSFISTGTEL 80
          +  S E    +    + 
Sbjct: 65 DVQSLEQIRDMFLDMQY 81


>gi|319764537|ref|YP_004128474.1| flagellar basal-body rod protein flgc [Alicycliphilus denitrificans
           BC]
 gi|330826753|ref|YP_004390056.1| flagellar basal-body rod protein FlgC [Alicycliphilus denitrificans
           K601]
 gi|317119098|gb|ADV01587.1| flagellar basal-body rod protein FlgC [Alicycliphilus denitrificans
           BC]
 gi|329312125|gb|AEB86540.1| flagellar basal-body rod protein FlgC [Alicycliphilus denitrificans
           K601]
          Length = 134

 Score = 53.7 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 25/43 (58%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++  SN N++ EM  MI  ++ + +   +++  +  +L+ ++
Sbjct: 89  GYVTHSNVNAVEEMVNMISASRSYQNNVEVMNTAKSLLLKTLQ 131



 Score = 42.2 bits (97), Expect = 0.068,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 37/109 (33%), Gaps = 6/109 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQ 54
           M + FN+  +A  A  QRL+ VA N++N D V       ++  +V F        +    
Sbjct: 3   MFSIFNVSGSAISAQSQRLNVVASNLANVDAVAGPDGQAYKARQVVFQTAPMGPDSSAGV 62

Query: 55  KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103
           ++S +        +             +    +     E    I  +R 
Sbjct: 63  RVSTIQESGVPGRRVHDPSNPMADAEGYVTHSNVNAVEEMVNMISASRS 111


>gi|117919770|ref|YP_868962.1| flagellar basal body rod protein FlgC [Shewanella sp. ANA-3]
 gi|117612102|gb|ABK47556.1| flagellar basal-body rod protein FlgC [Shewanella sp. ANA-3]
          Length = 138

 Score = 53.7 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 19/42 (45%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           GF+   N N M EM  MI  ++ +     + +  +  + + +
Sbjct: 93  GFIYKPNVNVMEEMADMISASRSYQMNVQVAEAAKSMLQQTL 134



 Score = 37.2 bits (84), Expect = 2.0,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 22/50 (44%), Gaps = 6/50 (12%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVG 46
            F++  +   A   RL+T A N++N D+V       +R+    F   + 
Sbjct: 5  NIFDVAGSGMSAQSLRLNTTASNIANADSVSSSVDKTYRSRHPIFEAEMA 54


>gi|104782845|ref|YP_609343.1| flagellar basal body rod protein FlgC [Pseudomonas entomophila L48]
 gi|95111832|emb|CAK16556.1| flagellar cell-proximal portion of basal-body rod FlgC [Pseudomonas
           entomophila L48]
          Length = 147

 Score = 53.7 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 32/73 (43%), Gaps = 6/73 (8%)

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
           +G +  +++  +   P  P  +      K G++   N N + EM  MI  ++ F +   L
Sbjct: 78  KGIIEDQSNLEARYEPNHPAAN------KDGYVYYPNVNVVEEMADMISASRAFQTNAEL 131

Query: 227 IDENEKSMLEAIR 239
           ++  +  M + + 
Sbjct: 132 MNTAKTMMQKVLT 144



 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 6/56 (10%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQ 54
          FNI  +   A   RL+TVA N++N +TV       +R     F+      +  + Q
Sbjct: 7  FNIAGSGMSAQNTRLNTVASNIANAETVSSSLDQTYRARHPVFATTFQQAQGGVGQ 62


>gi|71906389|ref|YP_283976.1| flagellar basal-body rod protein FlgC [Dechloromonas aromatica RCB]
 gi|71846010|gb|AAZ45506.1| Flagellar basal-body rod protein FlgC [Dechloromonas aromatica RCB]
          Length = 137

 Score = 53.7 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N + EM  MI  ++ + +   +++  +  +L  + 
Sbjct: 91  GYVAFPNVNVVEEMTNMISASRSYQTNVEVMNTAKTMLLRTLS 133



 Score = 38.7 bits (88), Expect = 0.81,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 26/64 (40%), Gaps = 6/64 (9%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDIDQKI 56
            F +  +A  A   RL+T A N++N D+V    G  +R  +V F         D  + +
Sbjct: 5  NVFQVSSSAMTAQSMRLNTTASNLANADSVISADGKPYRAKQVVFEATPMGNAGDSSKGV 64

Query: 57 SFVA 60
              
Sbjct: 65 RVRQ 68


>gi|222055648|ref|YP_002538010.1| flagellar basal-body rod protein FlgC [Geobacter sp. FRC-32]
 gi|221564937|gb|ACM20909.1| flagellar basal-body rod protein FlgC [Geobacter sp. FRC-32]
          Length = 139

 Score = 53.7 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 23/47 (48%), Gaps = 1/47 (2%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           G++   N N + EM  M+  T+ + + TT +       ++A+  I S
Sbjct: 93  GYVAYPNVNIVEEMADMVTATRAYEANTTAMKAGMDMQMKAL-EIGS 138



 Score = 42.5 bits (98), Expect = 0.056,   Method: Composition-based stats.
 Identities = 13/100 (13%), Positives = 35/100 (35%), Gaps = 7/100 (7%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDIDQ 54
          M  +  I  +A  A   R++ ++ N++N ++     G  +R     F+ V+     +++ 
Sbjct: 1  MD-AMEISASALTAERTRMNLISSNLANANSTRTDEGGQYRRKDAVFATVLDGASANMEG 59

Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES 94
              +      + ++                 D + A  +
Sbjct: 60 GTEVIGVEVVNIIEDQSPPRLQYDPGHPDAREDGYVAYPN 99


>gi|224373490|ref|YP_002607862.1| flagellar hook-associated protein FlgK [Nautilia profundicola
          AmH]
 gi|223589300|gb|ACM93036.1| flagellar hook-associated protein FlgK [Nautilia profundicola
          AmH]
          Length = 727

 Score = 53.7 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 30/79 (37%), Gaps = 2/79 (2%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV--VGAIKNDIDQKISFVAS 61
          SF+  L    A +  +   ++N+SN     +   +  FS +  + +I  DI   +   + 
Sbjct: 6  SFSTALTGLKAHQTAIDVTSNNISNASNPDYVRERAVFSTLNPINSIPGDIGTGVQISSI 65

Query: 62 GKEYLSKEVGSFISTGTEL 80
           +   +     + ST    
Sbjct: 66 YRITDTFLFNRYTSTSATF 84



 Score = 46.0 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 5/71 (7%), Positives = 18/71 (25%)

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
           +G      +                 ++   +   S  N   E+  +    + + +   +
Sbjct: 652 RGLTADLANQTQIVSSKKESTQTLLTSISNEYYSLSGVNIDEELVNLEQYQRGYQANAKV 711

Query: 227 IDENEKSMLEA 237
           I    + +   
Sbjct: 712 ITTINQMLDAL 722


>gi|127512277|ref|YP_001093474.1| flagellar basal body rod protein FlgC [Shewanella loihica PV-4]
 gi|126637572|gb|ABO23215.1| flagellar basal-body rod protein FlgC [Shewanella loihica PV-4]
          Length = 139

 Score = 53.7 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 20/43 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           GF+   N N M EM  MI  ++ +     + D  +  + + +R
Sbjct: 93  GFIYKPNVNVMEEMANMISASRSYQMNVQVADAAKSMLQQTLR 135



 Score = 40.2 bits (92), Expect = 0.25,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 31/87 (35%), Gaps = 6/87 (6%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56
            FN+  +   A   RL+T A N++N D+V       +R     F   +    +  +   
Sbjct: 5  NIFNVAGSGMSAQSVRLNTTASNIANADSVSSSVDKTYRARHPVFEAELAKASHQQNTSQ 64

Query: 57 SFVASGKEYLSKEVGSFISTGTELDFA 83
          +   +G     K +    S    L  A
Sbjct: 65 AVKVAGIVESDKPLQKEYSPDHPLADA 91


>gi|260774936|ref|ZP_05883837.1| flagellar basal-body rod protein FlgC [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260609191|gb|EEX35349.1| flagellar basal-body rod protein FlgC [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 138

 Score = 53.7 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 23/43 (53%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N M EM  MI  ++ + +   + D +++ +L  ++
Sbjct: 93  GYIYKPNVNVMEEMANMISASRSYQTNVQVADASKQMLLRTLQ 135



 Score = 35.6 bits (80), Expect = 6.8,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 25/62 (40%), Gaps = 6/62 (9%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56
            FN+  +A  A   RL+T + N++N D+V       ++     F   +   K   D  +
Sbjct: 5  NVFNVTGSAMSAESVRLNTTSSNLANADSVSSSAKDTYKARHAVFGAELSKAKYGRDHTV 64

Query: 57 SF 58
            
Sbjct: 65 PV 66


>gi|148380698|ref|YP_001255239.1| flagellar hook-associated protein FlgK [Clostridium botulinum A
          str. ATCC 3502]
 gi|153932743|ref|YP_001384982.1| flagellar hook-associated protein FlgK [Clostridium botulinum A
          str. ATCC 19397]
 gi|153935679|ref|YP_001388452.1| flagellar hook-associated protein FlgK [Clostridium botulinum A
          str. Hall]
 gi|226950152|ref|YP_002805243.1| flagellar hook-associated protein FlgK [Clostridium botulinum A2
          str. Kyoto]
 gi|148290182|emb|CAL84301.1| flagellar hook-associated protein 1 [Clostridium botulinum A str.
          ATCC 3502]
 gi|152928787|gb|ABS34287.1| flagellar hook-associated protein FlgK [Clostridium botulinum A
          str. ATCC 19397]
 gi|152931593|gb|ABS37092.1| flagellar hook-associated protein FlgK [Clostridium botulinum A
          str. Hall]
 gi|226841472|gb|ACO84138.1| flagellar hook-associated protein FlgK [Clostridium botulinum A2
          str. Kyoto]
          Length = 622

 Score = 53.7 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 21/39 (53%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
           NIG +   A +  L+T + N++N +T G+   +V+   
Sbjct: 8  LNIGKSGMFAQQGALNTTSHNIANANTEGYSRQRVELQT 46



 Score = 39.5 bits (90), Expect = 0.46,   Method: Composition-based stats.
 Identities = 4/40 (10%), Positives = 14/40 (35%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           S  +   E   ++     + +   +I   ++ +   I  +
Sbjct: 581 SGVSMDEEFANLVQFNHCYQANAKIISTVDQLLDVVINGL 620


>gi|304438469|ref|ZP_07398409.1| flagellar basal-body rod protein FlgB [Selenomonas sp. oral taxon
          149 str. 67H29BP]
 gi|304368552|gb|EFM22237.1| flagellar basal-body rod protein FlgB [Selenomonas sp. oral taxon
          149 str. 67H29BP]
          Length = 139

 Score = 53.7 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 28/73 (38%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
           ++   A  A   R   +++N++N +T  F+   V+F +++       D  +  V    +
Sbjct: 11 IDVSSRAMAASTLRHEVLSNNIANVNTPNFKRSHVRFEDLLKKELGLEDDPLMPVVRTHD 70

Query: 65 YLSKEVGSFISTG 77
                    + G
Sbjct: 71 RHLPLAYRGKAHG 83


>gi|238919257|ref|YP_002932772.1| flagellar basal-body rod protein FlgC, [Edwardsiella ictaluri
           93-146]
 gi|238868826|gb|ACR68537.1| flagellar basal-body rod protein FlgC, putative [Edwardsiella
           ictaluri 93-146]
          Length = 134

 Score = 53.3 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 6/43 (13%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N + + EM   I  ++ + +   +++  +  M++ + 
Sbjct: 89  GYVRMPNVDVVSEMVNSIAASRSYQANVEVLNTTKSLMMKTLT 131


>gi|224825162|ref|ZP_03698268.1| flagellar basal-body rod protein FlgC [Lutiella nitroferrum 2002]
 gi|224602833|gb|EEG09010.1| flagellar basal-body rod protein FlgC [Lutiella nitroferrum 2002]
          Length = 136

 Score = 53.3 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 27/61 (44%)

Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
              P    +  + +  +RG++   N N + EM  MI   + + +   L++  +  + + +
Sbjct: 73  TTPPRLKYDPGNPLADQRGYVNLPNVNPVEEMADMISAARSYQTNVELMNTAKNLLQKTL 132

Query: 239 R 239
           +
Sbjct: 133 Q 133


>gi|91792662|ref|YP_562313.1| flagellar basal body rod protein FlgC [Shewanella denitrificans
           OS217]
 gi|91714664|gb|ABE54590.1| flagellar basal-body rod protein FlgC [Shewanella denitrificans
           OS217]
          Length = 138

 Score = 53.3 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 20/43 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           GF+   N N M EM  MI  ++ +     + D  +  + + +R
Sbjct: 93  GFIYKPNVNVMEEMADMISASRSYQMNVQVADATKTMLQQTLR 135



 Score = 36.4 bits (82), Expect = 3.5,   Method: Composition-based stats.
 Identities = 14/95 (14%), Positives = 31/95 (32%), Gaps = 9/95 (9%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56
            F++  +   A   RL+T A N++N D+V       +R     F   +    +  +   
Sbjct: 5  NIFDVSGSGMAAQSIRLNTTASNIANADSVSSSVDKTYRARHPIFEAELNKAHDQQNGTK 64

Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA 91
                   + +     +   +      +GD +  
Sbjct: 65 ---GVQVRAIVESDKPLLKEYSPSHPMADGDGFIY 96


>gi|296134284|ref|YP_003641531.1| flagellar hook-associated protein FlgK [Thermincola sp. JR]
 gi|296032862|gb|ADG83630.1| flagellar hook-associated protein FlgK [Thermincola potens JR]
          Length = 479

 Score = 53.3 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 16/43 (37%)

Query: 200 EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           E S  +   EM  MI     +N+    I   ++ +   +  + 
Sbjct: 433 EVSGVSLDEEMTNMIKFQHAYNAAARTITAMDEMLDTIVNRLG 475



 Score = 53.3 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 19/40 (47%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
            NIG  A  A ++ L   A N++N +T GF   +   + 
Sbjct: 7  GLNIGRQALQAQQRALDVTAHNIANANTEGFSRQRAVMAT 46


>gi|157376210|ref|YP_001474810.1| flagellar hook-associated protein FlgK [Shewanella sediminis
          HAW-EB3]
 gi|157318584|gb|ABV37682.1| flagellar hook-associated protein FlgK [Shewanella sediminis
          HAW-EB3]
          Length = 638

 Score = 53.3 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 21/50 (42%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51
              NI     LA + +L+  ++N++N +T G+     + S +       
Sbjct: 3  MNLLNIARTGVLASQSQLAVTSNNIANANTQGYHRQVAEQSSLESQRAGS 52



 Score = 37.5 bits (85), Expect = 1.6,   Method: Composition-based stats.
 Identities = 4/38 (10%), Positives = 11/38 (28%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           S  N   E   ++   Q + +   ++    +       
Sbjct: 598 SGVNIDEEAANLLRFQQAYQASARIMTTASEIFDTLFN 635


>gi|121997313|ref|YP_001002100.1| flagellar hook-associated protein FlgK [Halorhodospira halophila
          SL1]
 gi|121588718|gb|ABM61298.1| flagellar hook-associated protein FlgK [Halorhodospira halophila
          SL1]
          Length = 685

 Score = 53.3 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 22/40 (55%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
          M      G++   A ++ L+T + N+SN +T G+   +V+
Sbjct: 1  MVDILQTGISGLRASQRGLATTSHNISNVNTDGYSRQRVE 40


>gi|150388562|ref|YP_001318611.1| flagellar hook-associated protein FlgK [Alkaliphilus
          metalliredigens QYMF]
 gi|149948424|gb|ABR46952.1| flagellar hook-associated protein FlgK [Alkaliphilus
          metalliredigens QYMF]
          Length = 493

 Score = 53.3 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 20/38 (52%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
          + FN   +   A ++ L  V  N++N +T G+   +++
Sbjct: 6  SGFNTATSGIFASQRSLDVVGHNIANANTPGYSRQRLE 43



 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 6/42 (14%), Positives = 17/42 (40%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           S  +   EM  M+     +N+   ++   ++ +   I  + +
Sbjct: 449 SGVSLDEEMANMVRFQHAYNASARMVTTMDEMIDVIINRMGT 490


>gi|291288218|ref|YP_003505034.1| flagellar basal-body rod protein FlgC [Denitrovibrio acetiphilus
           DSM 12809]
 gi|290885378|gb|ADD69078.1| flagellar basal-body rod protein FlgC [Denitrovibrio acetiphilus
           DSM 12809]
          Length = 134

 Score = 53.3 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 25/46 (54%), Gaps = 1/46 (2%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G++   N N + EM  M+  ++ + + TT++   ++  ++A+  I 
Sbjct: 88  GYVAYPNINPIEEMVNMLEASKSYEANTTVVSTAKQLAMKAL-EIG 132



 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/101 (14%), Positives = 27/101 (26%), Gaps = 6/101 (5%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDIDQKISF 58
             +      A   R+S ++ N++N +T     G  +    V F +V+        +    
Sbjct: 7   LGVAGTGMSAQRIRISAISANLANANTTRTDDGGPYVRQDVIFKQVLEGELAGGVKVTEV 66

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
           V   K  + K          E   A                
Sbjct: 67  VKDEKPPILKYEPGHPDADEEGYVAYPNINPIEEMVNMLEA 107


>gi|163785037|ref|ZP_02179764.1| flagellar hook-associated protein [Hydrogenivirga sp. 128-5-R1-1]
 gi|159879693|gb|EDP73470.1| flagellar hook-associated protein [Hydrogenivirga sp. 128-5-R1-1]
          Length = 166

 Score = 53.3 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/155 (10%), Positives = 50/155 (32%), Gaps = 5/155 (3%)

Query: 88  AWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGE 147
            ++     + I L+   + +    G+ +S+ G          P +         +     
Sbjct: 9   NFYVQLYAKDIKLSPSIKIQND-TGNFISSIGGINNYTSLYNPEEKALLTTTTGLQIGST 67

Query: 148 ISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVK---RGFLE-DSN 203
             +   +     L +    + + ++  S I   I        +   ++   +  +E  S 
Sbjct: 68  YYKLNSIDNLSLLDTKSFQELYTKKFTSEIGFEISDAKNRLDANKNLRDAVQSKIEEKSG 127

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            N   E+  ++   + + S   +I+  ++ +   +
Sbjct: 128 VNVDEELVNLMKYQRAYQSAAKIINVTDELLQTIL 162


>gi|289679031|ref|ZP_06499921.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           syringae FF5]
          Length = 124

 Score = 53.3 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 30/73 (41%), Gaps = 6/73 (8%)

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
            G +   ++  +   P  P  D      K G++   N N + EM  MI  ++ F +   +
Sbjct: 55  NGIIEDSSNLEARYEPNHPSAD------KDGYVYYPNVNVVEEMADMISASRSFQTNAEI 108

Query: 227 IDENEKSMLEAIR 239
           ++  +  M + + 
Sbjct: 109 MNTAKSMMQKVLT 121


>gi|229591865|ref|YP_002873984.1| flagellar hook-associated protein FlgK [Pseudomonas fluorescens
          SBW25]
 gi|229363731|emb|CAY51133.1| putative flagellar hook-associated protein [Pseudomonas
          fluorescens SBW25]
          Length = 682

 Score = 53.3 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 24/51 (47%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
           +  NIG++   A +  LS +++N++N +T G+   +   S         +
Sbjct: 1  MSLLNIGMSGLNAAQGSLSVLSNNIANANTAGYSRQQTIQSANASNQYGGV 51



 Score = 36.0 bits (81), Expect = 4.2,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 18/40 (45%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           S  N   E G MI   Q + + + +I   +++    I ++
Sbjct: 643 SQVNLDEEAGDMIKFQQYYTASSQIIKAAQETFSTLINSL 682


>gi|121533766|ref|ZP_01665593.1| flagellar basal-body rod protein FlgB [Thermosinus carboxydivorans
           Nor1]
 gi|121307757|gb|EAX48672.1| flagellar basal-body rod protein FlgB [Thermosinus carboxydivorans
           Nor1]
          Length = 164

 Score = 53.3 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 11/68 (16%), Positives = 25/68 (36%)

Query: 21  TVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTEL 80
            +++N++N +T GF+  +V F E +    N                  +    + T    
Sbjct: 57  VISNNIANVNTPGFKRSEVHFEEQLKQALNAKSGLSRTHQRHIAAKGDDFSVEVITVNNT 116

Query: 81  DFALEGDA 88
            +  +G+ 
Sbjct: 117 AYRADGNN 124


>gi|295706287|ref|YP_003599362.1| flagellar basal-body rod protein FlgC [Bacillus megaterium DSM 319]
 gi|294803946|gb|ADF41012.1| flagellar basal-body rod protein FlgC [Bacillus megaterium DSM 319]
          Length = 149

 Score = 53.3 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 15/123 (12%), Positives = 39/123 (31%), Gaps = 3/123 (2%)

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
           S            V  +         V +         V+ +    + +           
Sbjct: 26  SNMANAETTRGTYVNGEWQPYKRKMVVMQSDRSPSFSSVLHSEINKNQNNGVKVTDIVED 85

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
               N+   P    +     +G+++  N + + EM  +I  T+ + +  T+ + N+  + 
Sbjct: 86  NTPFNLVYNPTHPDAND---QGYVQMPNVDPLKEMTDLISATRSYEANVTVFNTNKSILT 142

Query: 236 EAI 238
           +A+
Sbjct: 143 KAL 145



 Score = 35.6 bits (80), Expect = 5.6,   Method: Composition-based stats.
 Identities = 10/28 (35%), Positives = 15/28 (53%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTV 32
           NI  +A  A   R+  V+ NM+N +T 
Sbjct: 7  MNITSSALTANRLRMDVVSSNMANAETT 34


>gi|291288372|ref|YP_003505188.1| flagellar hook-associated protein FlgK [Denitrovibrio acetiphilus
           DSM 12809]
 gi|290885532|gb|ADD69232.1| flagellar hook-associated protein FlgK [Denitrovibrio acetiphilus
           DSM 12809]
          Length = 584

 Score = 53.3 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 4/40 (10%), Positives = 18/40 (45%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
            +   EM  ++   + F + +  I   ++ + + + ++ +
Sbjct: 542 VSMDEEMTNLMKFQRAFEASSRFITVVDEMLEKLVNSLGT 581



 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 12/88 (13%), Positives = 27/88 (30%), Gaps = 3/88 (3%)

Query: 1  MQTSFN---IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS 57
          M    +    G++   A +  +    +N+SN +T G+   +V          +       
Sbjct: 1  MSNLMHIFSTGVSGLFASQAGIDVTGNNISNVNTEGYSRQRVVLETANPEKNSQGVFGRG 60

Query: 58 FVASGKEYLSKEVGSFISTGTELDFALE 85
                E +  ++ +        D A  
Sbjct: 61 VSVETVERIYDDMLASSIRNESSDLAYY 88


>gi|167034946|ref|YP_001670177.1| flagellar basal body rod protein FlgC [Pseudomonas putida GB-1]
 gi|166861434|gb|ABY99841.1| flagellar basal-body rod protein FlgC [Pseudomonas putida GB-1]
          Length = 147

 Score = 53.3 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N + EM  MI  ++ F +   L++  +  M + + 
Sbjct: 102 GYVYYPNVNVVEEMADMISASRAFQTNAELMNTAKSMMQKVLT 144



 Score = 41.8 bits (96), Expect = 0.083,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 6/56 (10%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQ 54
          FNI  +   A   RL+TVA N++N +TV       +R     F+      +    Q
Sbjct: 7  FNIAGSGMSAQNTRLNTVASNIANAETVSSSIDQTYRARHPVFATTFQNAQAGGSQ 62


>gi|261253616|ref|ZP_05946189.1| flagellar basal-body rod protein FlgC [Vibrio orientalis CIP
           102891]
 gi|260937007|gb|EEX92996.1| flagellar basal-body rod protein FlgC [Vibrio orientalis CIP
           102891]
          Length = 138

 Score = 53.3 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 23/43 (53%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N M EM  MI  ++ + +   + D +++ +L  ++
Sbjct: 93  GYIYKPNVNVMEEMANMISASRSYQTNVQVADASKQMLLRTLQ 135


>gi|225850273|ref|YP_002730507.1| flagellar basal-body rod protein FlgC [Persephonella marina EX-H1]
 gi|225645322|gb|ACO03508.1| flagellar basal-body rod protein FlgC [Persephonella marina EX-H1]
          Length = 136

 Score = 53.3 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 24/48 (50%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           + G++   N + + EM  M+   + + +  T  + ++  +L+++  I 
Sbjct: 88  QNGYVAYPNVDPLREMVDMMSAIRTYEANLTAFNTHKDMLLKSLELIR 135



 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/109 (11%), Positives = 25/109 (22%), Gaps = 10/109 (9%)

Query: 1   MQ-TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDID 53
           M      + +    A   R+   + N++N ++     G  +R     F  V+        
Sbjct: 1   MIFKGLEVSVTGMAAQRIRIDITSSNLANVNSTRTEDGQPYRRKVPVFQAVLDNQTKTPV 60

Query: 54  QK---ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
            K      +     +  K   S          A                
Sbjct: 61  YKVKIPEVIEDPSPFKLKFDPSHPDADQNGYVAYPNVDPLREMVDMMSA 109


>gi|119775452|ref|YP_928192.1| flagellar basal body rod protein FlgC [Shewanella amazonensis SB2B]
 gi|119767952|gb|ABM00523.1| flagellar basal-body rod protein FlgC [Shewanella amazonensis SB2B]
          Length = 137

 Score = 53.3 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           GF+   N N M EM  MI  ++ +     + D  +  +++ +R
Sbjct: 92  GFIYKPNVNVMEEMADMISASRSYQMNVQVADTAKSMLMQTLR 134



 Score = 40.6 bits (93), Expect = 0.18,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 26/86 (30%), Gaps = 6/86 (6%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56
            FN+  +   A   RL+T A N++N D+V       +R     F   +         + 
Sbjct: 5  NIFNVSGSGMSAQSVRLNTTASNIANADSVSSSVDKTYRARHPVFEAELAKASQQQSARG 64

Query: 57 SFVASGKEYLSKEVGSFISTGTELDF 82
            V    E        +       D 
Sbjct: 65 VNVKGIVESDKPLQKEYNPDHPMADA 90


>gi|291277450|ref|YP_003517222.1| flagellar basal-body rod protein [Helicobacter mustelae 12198]
 gi|290964644|emb|CBG40498.1| flagellar basal-body rod protein [Helicobacter mustelae 12198]
          Length = 164

 Score = 53.3 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 19/47 (40%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           G++   N N + EM  +I  T+ + +        +     AI  + +
Sbjct: 118 GYVAYPNVNPVVEMADLIEATRAYQANVAAFQSAKNMANNAITMLQA 164



 Score = 41.8 bits (96), Expect = 0.081,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 22/49 (44%), Gaps = 6/49 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44
           +SF+I      A   R + ++ N++N +T     G  +R  +V F   
Sbjct: 4  LSSFDISGYGLSAQRFRTNIISSNIANANTTRTDEGGPYRRQEVVFKAF 52


>gi|71280491|ref|YP_268220.1| flagellar basal-body rod protein FlgC [Colwellia psychrerythraea
           34H]
 gi|71146231|gb|AAZ26704.1| flagellar basal-body rod protein FlgC [Colwellia psychrerythraea
           34H]
          Length = 143

 Score = 53.3 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N + EM  MI  ++ + +   L +  +  + + ++
Sbjct: 97  GYIYKPNVNVIEEMTNMISASRSYQTNVQLAESAKNMLNKTLQ 139



 Score = 36.4 bits (82), Expect = 4.0,   Method: Composition-based stats.
 Identities = 18/103 (17%), Positives = 32/103 (31%), Gaps = 7/103 (6%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKF-SEVVGAIKNDIDQK 55
             F+I  +   A   RL+T A N++N D+V       +R     F + +  A        
Sbjct: 5   NVFDITGSGMSAQSVRLNTTASNIANADSVSSSADKTYRARHPVFAAAMQEAAAGQGKSD 64

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98
            S V      + +                + D +    +   I
Sbjct: 65  GSGVGVNVLGIVESDKPLNVEYAPSHPMADKDGYIYKPNVNVI 107


>gi|68164540|gb|AAY87269.1| predicted flagellar hook-associated protein 1 [uncultured
          bacterium BAC17H8]
          Length = 1404

 Score = 53.3 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 22/44 (50%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44
          M   F+IG +   +  Q L+    N++N +T G++    +  E+
Sbjct: 1  MANLFDIGRSGLNSYRQGLAITGQNIANINTDGYKRRGAELEEL 44


>gi|16125152|ref|NP_419716.1| flagellar hook-associated protein FlaN [Caulobacter crescentus
          CB15]
 gi|221233880|ref|YP_002516316.1| flagellar hook-associated protein FlaN [Caulobacter crescentus
          NA1000]
 gi|13422164|gb|AAK22884.1| flagellar hook-associated protein FlaN, putative [Caulobacter
          crescentus CB15]
 gi|220963052|gb|ACL94408.1| flagellar hook-associated protein FlaN [Caulobacter crescentus
          NA1000]
          Length = 703

 Score = 53.3 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 20/46 (43%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50
           +   +  +A +  L   +DN++N +T G+    V  S ++     
Sbjct: 7  MSTATSGMMAAQTGLRVTSDNIANVNTTGYVRKTVSQSNLLSNGMG 52



 Score = 34.8 bits (78), Expect = 9.6,   Method: Composition-based stats.
 Identities = 7/30 (23%), Positives = 11/30 (36%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
            N   E+  +    Q FN+   LI   +  
Sbjct: 665 VNLDEELINLTTYQQAFNASARLIQATKDM 694


>gi|148546704|ref|YP_001266806.1| flagellar basal body rod protein FlgC [Pseudomonas putida F1]
 gi|148510762|gb|ABQ77622.1| flagellar basal-body rod protein FlgC [Pseudomonas putida F1]
          Length = 147

 Score = 53.3 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N + EM  MI  ++ F +   L++  +  M + + 
Sbjct: 102 GYVYYPNVNVVEEMADMISASRAFQTNAELMNTAKSMMQKVLT 144



 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 6/56 (10%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQ 54
          FNI  +   A   RL+TVA N++N +TV       +R     F+      +    Q
Sbjct: 7  FNIAGSGMSAQNTRLNTVASNIANAETVSSSIDQTYRARHPVFATTFQNAQAGSSQ 62


>gi|322807049|emb|CBZ04623.1| flagellar hook-associated protein FlgK [Clostridium botulinum
          H04402 065]
          Length = 630

 Score = 53.3 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 21/39 (53%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
           NIG +   A +  ++T + N++N +T G+   +V+   
Sbjct: 8  LNIGKSGMFAQQGAINTTSHNIANANTEGYSRQRVELQT 46



 Score = 39.9 bits (91), Expect = 0.31,   Method: Composition-based stats.
 Identities = 4/40 (10%), Positives = 14/40 (35%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           S  +   E   ++     + +   +I   ++ +   I  +
Sbjct: 589 SGVSLDEEFANLVQFNHCYQANAKIISTVDQLLDVVINGL 628


>gi|296103613|ref|YP_003613759.1| Flagellar basal-body rod protein, FlgC [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295058072|gb|ADF62810.1| Flagellar basal-body rod protein, FlgC [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 134

 Score = 53.3 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 22/44 (50%)

Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +G++   N N M EM   I  ++ + +   +++  +  ML+ + 
Sbjct: 88  QGYVRMPNVNVMNEMVNTISASRSYQANVEVMNSAKSLMLKTLT 131



 Score = 36.0 bits (81), Expect = 5.1,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 6/44 (13%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFS 42
          F+I  +A  A  +RL+  A NM+N D+V       +R  +V FS
Sbjct: 7  FDISGSAMAAQSRRLNVSASNMANADSVAGPDGQPYRARQVVFS 50


>gi|3493240|gb|AAC33326.1| hook associated protein I homolog [Caulobacter crescentus CB15]
          Length = 397

 Score = 53.3 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 20/46 (43%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50
           +   +  +A +  L   +DN++N +T G+    V  S ++     
Sbjct: 7  MSTATSGMMAAQTGLRVTSDNIANVNTTGYVRKTVSQSNLLSNGMG 52


>gi|311992325|gb|ADQ26736.1| proximal rod protein [Aeromonas hydrophila]
          Length = 138

 Score = 53.3 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 22/43 (51%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           GF+   N N + EM  MI+ ++ + +   + D  +K + + + 
Sbjct: 92  GFIFKPNVNMVEEMADMINASRSYQTNVQVADSAKKMLQQTLN 134



 Score = 36.4 bits (82), Expect = 3.6,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 6/55 (10%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKND 51
            F+I  +A  A   RL+TVA NM+N D+V       +   +  F+  +    +D
Sbjct: 4  KVFDIAGSAMSAQSVRLNTVASNMANADSVSSSVEKTYHARRPIFAAQLDQAMSD 58


>gi|145298489|ref|YP_001141330.1| flagellar basal body rod protein FlgC [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142851261|gb|ABO89582.1| flagellar basal body rod protein FlgC [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 139

 Score = 53.3 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 22/43 (51%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N + EM  MI+ ++ + +   + D  +K + + + 
Sbjct: 93  GYIFKPNVNMVEEMADMINASRSYQTNVQVADSAKKMLQQTLN 135



 Score = 36.4 bits (82), Expect = 3.2,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56
            F+I  +A  A   RL+TVA NM+N D+V       +   +  F+  +    +D    +
Sbjct: 5  KVFDIAGSAMSAQSVRLNTVASNMANADSVSSSVEKTYHARRPIFAAQLDQAMSDKQSSV 64


>gi|294500941|ref|YP_003564641.1| flagellar basal-body rod protein FlgC [Bacillus megaterium QM
           B1551]
 gi|294350878|gb|ADE71207.1| flagellar basal-body rod protein FlgC [Bacillus megaterium QM
           B1551]
          Length = 149

 Score = 53.3 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 25/43 (58%)

Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           +G+++  N + + EM  +I  T+ + +  T+ + N+  + +A+
Sbjct: 103 QGYVKMPNVDPLKEMTDLISATRSYEANVTVFNTNKSILTKAL 145



 Score = 37.5 bits (85), Expect = 1.7,   Method: Composition-based stats.
 Identities = 10/30 (33%), Positives = 16/30 (53%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV 32
           + NI  +A  A   R+  V+ NM+N +T 
Sbjct: 5  RNMNITSSALTANRLRMDVVSSNMANAETT 34


>gi|149194904|ref|ZP_01871998.1| flagellar hook-associated protein [Caminibacter mediatlanticus
          TB-2]
 gi|149135063|gb|EDM23545.1| flagellar hook-associated protein [Caminibacter mediatlanticus
          TB-2]
          Length = 717

 Score = 52.9 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 33/80 (41%), Gaps = 2/80 (2%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV--VGAIKNDIDQKISFVA 60
          +S +  L+   A +  + T ++N+SN     +   +  FS +  + +I  DI   ++   
Sbjct: 5  SSLSTALSGLNAHQTAIQTTSNNISNASNPDYVRERAVFSTLPPINSIPGDIGTGVNISK 64

Query: 61 SGKEYLSKEVGSFISTGTEL 80
            +   +      + T  +L
Sbjct: 65 IYRITDTFVFNQMVKTSQDL 84



 Score = 42.9 bits (99), Expect = 0.034,   Method: Composition-based stats.
 Identities = 4/47 (8%), Positives = 16/47 (34%)

Query: 191 GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
             +++  +   S  N   E+  +    + + +   +I    + +   
Sbjct: 666 FTSIQNQYYSISGVNIDEELINLEKFQRGYQANAKVITTINQMLDAL 712


>gi|311031940|ref|ZP_07710030.1| flagellar hook-associated protein FlgK [Bacillus sp. m3-13]
          Length = 620

 Score = 52.9 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 18/38 (47%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKF 41
          S  +     +  +  L TV  N++N +T G+   +V F
Sbjct: 7  SLEVARRGLVTQQTALQTVGHNIANANTPGYTRQRVNF 44



 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 17/41 (41%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  +   EM  MI     +N+   +I   ++ + + I  + 
Sbjct: 576 SGVSLDEEMTSMIQYQHAYNASARMITLTDELLDKIINGMG 616


>gi|304404241|ref|ZP_07385903.1| flagellar basal-body rod protein FlgB [Paenibacillus
          curdlanolyticus YK9]
 gi|304347219|gb|EFM13051.1| flagellar basal-body rod protein FlgB [Paenibacillus
          curdlanolyticus YK9]
          Length = 136

 Score = 52.9 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 33/67 (49%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69
           A  + E R   ++DN++N DT  F+  +V F +++       ++KI+ + +   ++   
Sbjct: 14 TAIQSAETRQKVISDNIANVDTPNFKRSEVLFEDLLADAMGTNEKKIAGIRTNARHIPIG 73

Query: 70 VGSFIST 76
            S I T
Sbjct: 74 QSSSIPT 80


>gi|294140182|ref|YP_003556160.1| flagellar basal-body rod protein FlgC [Shewanella violacea DSS12]
 gi|293326651|dbj|BAJ01382.1| flagellar basal-body rod protein FlgC [Shewanella violacea DSS12]
          Length = 138

 Score = 52.9 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 20/43 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           GF+   N N M EM  MI  ++ +     + +  +  + + +R
Sbjct: 93  GFIYKPNVNVMEEMANMISASRSYQMNVQVAEAAKSMLQQTLR 135



 Score = 38.7 bits (88), Expect = 0.63,   Method: Composition-based stats.
 Identities = 16/95 (16%), Positives = 31/95 (32%), Gaps = 9/95 (9%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56
            FN+  +   A   RL+T A N++N D+V       +R     F   +           
Sbjct: 5  NIFNVAGSGMSAQSIRLNTTASNIANADSVSSSVDKTYRARHPIFEAEMAKASYQQQSSP 64

Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA 91
          S      + + +     +   +      +GD +  
Sbjct: 65 SV---KVKGIVESDAPLLKEYSPNHPMADGDGFIY 96


>gi|295399807|ref|ZP_06809788.1| flagellar basal-body rod protein FlgC [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|312111681|ref|YP_003989997.1| flagellar basal-body rod protein FlgC [Geobacillus sp. Y4.1MC1]
 gi|294978210|gb|EFG53807.1| flagellar basal-body rod protein FlgC [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|311216782|gb|ADP75386.1| flagellar basal-body rod protein FlgC [Geobacillus sp. Y4.1MC1]
          Length = 150

 Score = 52.9 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 25/48 (52%), Gaps = 1/48 (2%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           + G++   N + + EM  ++  T+ + +  T+ +  +  +++A+  I 
Sbjct: 103 RNGYVRLPNVDPLKEMVDLMSATRSYEANVTVFNATKGMLMKAL-EIG 149



 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 35/116 (30%), Gaps = 17/116 (14%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV------G----FRTIKVK-------FSE 43
           M  + +I  +A  A   R+  V+ NM+N DT       G    +R   V        FS 
Sbjct: 3   MFQNLDITASALTAQRLRMDVVSSNMANVDTTRARFVNGQWEPYRRKLVVMEPRQEGFST 62

Query: 44  VVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
            + A  N  D     V   K          +   +  D    G        P   +
Sbjct: 63  YLQAAMNSRDSVGGGVRVTKIVEDPAPFKLVYDPSHPDADRNGYVRLPNVDPLKEM 118


>gi|87119678|ref|ZP_01075575.1| Flagellar basal-body rod protein FlgC [Marinomonas sp. MED121]
 gi|86165154|gb|EAQ66422.1| Flagellar basal-body rod protein FlgC [Marinomonas sp. MED121]
          Length = 149

 Score = 52.9 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 22/44 (50%)

Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            G++  SN N + EM  M+  ++ F +   +++  +  M + + 
Sbjct: 102 SGYVYYSNVNPVEEMADMMSASRSFQTNVEVMNSAKSMMQKMLT 145



 Score = 37.9 bits (86), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 6/58 (10%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDID 53
             F I  +A  A   RL+TVA N++N D+V       +R  K  FS ++        
Sbjct: 4  NNIFAISGSAMSAQTIRLNTVASNIANADSVASSEDQTYRARKPVFSTMMQESMRGYG 61


>gi|121596115|ref|YP_988011.1| flagellar basal-body rod protein FlgC [Acidovorax sp. JS42]
 gi|222112270|ref|YP_002554534.1| flagellar basal-body rod protein flgc [Acidovorax ebreus TPSY]
 gi|120608195|gb|ABM43935.1| flagellar basal-body rod protein FlgC [Acidovorax sp. JS42]
 gi|221731714|gb|ACM34534.1| flagellar basal-body rod protein FlgC [Acidovorax ebreus TPSY]
          Length = 134

 Score = 52.9 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 25/43 (58%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++  SN N++ EM  MI  ++ + +   +++  +  +L+ ++
Sbjct: 89  GYVTHSNVNAVEEMVNMISASRSYQNNVEVMNTAKTLLLKTLQ 131



 Score = 41.8 bits (96), Expect = 0.083,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 39/109 (35%), Gaps = 6/109 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQ 54
           M + FN+  +A  A  QRL+ VA N++N D V       ++  +V F       ++    
Sbjct: 3   MFSIFNVSGSAISAQSQRLNVVASNLANVDAVAGPDGQAYKARQVVFQTAPMGPESAAGV 62

Query: 55  KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103
           ++S +    +   +             +    +     E    I  +R 
Sbjct: 63  RVSSIQESDQPGRRVHDPANPMADAEGYVTHSNVNAVEEMVNMISASRS 111


>gi|146296674|ref|YP_001180445.1| flagellar hook-associated protein FlgK [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145410250|gb|ABP67254.1| flagellar hook-associated protein FlgK [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 525

 Score = 52.9 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/192 (10%), Positives = 56/192 (29%), Gaps = 11/192 (5%)

Query: 51  DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTD 110
            I   ++ +    + L ++     + G  L+    G  +F     +     R  +     
Sbjct: 341 GIPYYLNRLNEFAQKLIEKFNELHTQGWSLNGQNTGINFFEPPVSQTFFYARYIKVSDAI 400

Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170
              L + +  Y V ++      +     + N     +  +    + ++       SQG  
Sbjct: 401 MNDLNNIATTYDVNNLPGGNDLVVDMLRLRNDTSIFKEGRFEDFLKSLISNLGVDSQG-- 458

Query: 171 RRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
                  + N      +  +      G       +   EM  +I     F +   +I+  
Sbjct: 459 ---AKNFAENQKVMVTQLDNRRQAVSG------VSIDEEMTNLIKYQHGFQASARMINAF 509

Query: 231 EKSMLEAIRNIA 242
           ++ +   +  + 
Sbjct: 510 DEMLDVIVNRLG 521



 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 10/77 (12%), Positives = 22/77 (28%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
             I         + L   + N++N  T G+    +    +  + +  I      V  G 
Sbjct: 5  GLEIARTGIYVNRKGLEVTSHNVANASTPGYTRQVLNVKSIPPSNRVGIYDPKFQVGMGA 64

Query: 64 EYLSKEVGSFISTGTEL 80
          +  S      +    + 
Sbjct: 65 DVQSLVQIRDMFLDMQY 81


>gi|172057890|ref|YP_001814350.1| flagellar basal-body rod protein FlgC [Exiguobacterium sibiricum
           255-15]
 gi|171990411|gb|ACB61333.1| flagellar basal-body rod protein FlgC [Exiguobacterium sibiricum
           255-15]
          Length = 132

 Score = 52.9 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 25/46 (54%), Gaps = 1/46 (2%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G+++  N + + EM  M+  T+ + +  T ++  +  +++A+  I 
Sbjct: 87  GYVKMPNVDLLKEMVDMMGATRSYEANVTALNATKAMLVKAM-EIG 131



 Score = 48.7 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 10/32 (31%), Positives = 15/32 (46%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32
          M + F+       A   RL TV+ N++N  T 
Sbjct: 3  MFSGFHTSATGLTAQRLRLDTVSANIANAQTT 34


>gi|332982896|ref|YP_004464337.1| flagellar hook-associated protein FlgK [Mahella australiensis
          50-1 BON]
 gi|332700574|gb|AEE97515.1| flagellar hook-associated protein FlgK [Mahella australiensis
          50-1 BON]
          Length = 495

 Score = 52.9 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 3/56 (5%)

Query: 1  MQTSFN---IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
          M ++F    IG +A    +Q L+  A N++N  T G+   +V    +V      + 
Sbjct: 1  MSSTFYGLQIGKSAINLQQQALNVTAHNIANAGTPGYTRQQVISEAIVPPSTLGMG 56



 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 6/41 (14%), Positives = 16/41 (39%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S      E+  M+   Q +N+   +I   ++ +   +  + 
Sbjct: 451 SGVLLDEELMNMVKFQQSYNAAARVITAMDEMLDVLVNRVG 491


>gi|28897550|ref|NP_797155.1| flagellar basal body rod protein FlgC [Vibrio parahaemolyticus RIMD
           2210633]
 gi|153839687|ref|ZP_01992354.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           AQ3810]
 gi|260364609|ref|ZP_05777211.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           K5030]
 gi|260878286|ref|ZP_05890641.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           AN-5034]
 gi|260898116|ref|ZP_05906612.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           Peru-466]
 gi|260901951|ref|ZP_05910346.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           AQ4037]
 gi|5361006|gb|AAD42913.1|U12817_7 polar flagellar FlgC homolog [Vibrio parahaemolyticus]
 gi|28805762|dbj|BAC59039.1| polar flagellar FlgC [Vibrio parahaemolyticus RIMD 2210633]
 gi|149746797|gb|EDM57785.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           AQ3810]
 gi|308086105|gb|EFO35800.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           Peru-466]
 gi|308090161|gb|EFO39856.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           AN-5034]
 gi|308106781|gb|EFO44321.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           AQ4037]
 gi|308115115|gb|EFO52655.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           K5030]
 gi|328473455|gb|EGF44303.1| flagellar basal body rod protein FlgC [Vibrio parahaemolyticus
           10329]
          Length = 137

 Score = 52.9 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 23/43 (53%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N M EM  MI  ++ + +   + D +++ +L  ++
Sbjct: 92  GYIYKPNVNVMEEMANMISASRAYQTNVQVADSSKQMLLRTLQ 134



 Score = 38.3 bits (87), Expect = 0.99,   Method: Composition-based stats.
 Identities = 15/81 (18%), Positives = 26/81 (32%), Gaps = 6/81 (7%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56
            FN+  +A  A   RL+T + N++N D+V       ++     F   +       D   
Sbjct: 5  NVFNVTGSAMSAESVRLNTTSSNLANADSVSSSAKDTYKARHAVFGAELSNAMRGGDTVP 64

Query: 57 SFVASGKEYLSKEVGSFISTG 77
            V    E        +    
Sbjct: 65 VKVLGIVESDKPLSAEYNPDH 85


>gi|332981429|ref|YP_004462870.1| flagellar basal-body rod protein FlgC [Mahella australiensis 50-1
           BON]
 gi|332699107|gb|AEE96048.1| flagellar basal-body rod protein FlgC [Mahella australiensis 50-1
           BON]
          Length = 129

 Score = 52.9 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 20/41 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
           G++   N +   EM  M+  T+ + +  T+ID  +   + A
Sbjct: 84  GYVRMPNVDVTEEMVDMVSATRSYEANVTVIDAAKNMAMRA 124



 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 7/32 (21%), Positives = 15/32 (46%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32
          M  + N   +   A   R+  ++ N++N +T 
Sbjct: 3  MFDAINNSASGLTAQRLRMDIISQNIANANTT 34


>gi|157146228|ref|YP_001453547.1| flagellar basal body rod protein FlgC [Citrobacter koseri ATCC
           BAA-895]
 gi|157083433|gb|ABV13111.1| hypothetical protein CKO_01985 [Citrobacter koseri ATCC BAA-895]
          Length = 134

 Score = 52.9 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 6/43 (13%), Positives = 22/43 (51%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G+++  N + + EM   +  ++ + +   +++  +  ML+ + 
Sbjct: 89  GYVKMPNVDVVGEMVNTMSASRSYQANVEVLNTVKSMMLKTLT 131



 Score = 39.1 bits (89), Expect = 0.62,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 6/47 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42
             F+I  +A  A  +RL+  A N++N     G     +R  +V F 
Sbjct: 4  LNIFDIAGSALTAQSKRLNVAASNLANADSVTGPDGQPYRAKQVVFQ 50


>gi|323495379|ref|ZP_08100456.1| flagellar basal body rod protein FlgC [Vibrio brasiliensis LMG
           20546]
 gi|323310302|gb|EGA63489.1| flagellar basal body rod protein FlgC [Vibrio brasiliensis LMG
           20546]
          Length = 138

 Score = 52.9 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 23/43 (53%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N M EM  MI  ++ + +   L D +++ +L  ++
Sbjct: 93  GYIYKPNVNVMEEMANMISASRSYQTNVQLADASKQMLLRTLQ 135


>gi|317051987|ref|YP_004113103.1| flagellar basal body rod protein [Desulfurispirillum indicum S5]
 gi|316947071|gb|ADU66547.1| flagellar basal body rod protein [Desulfurispirillum indicum S5]
          Length = 129

 Score = 52.9 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 28/83 (33%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M  +F    +A      R S  A N++N +T GF++ +V  +E V          I    
Sbjct: 1  MVDAFYNAASAIKTYGFRQSASAHNVANVNTDGFKSQRVDTAEGVSGGVRPTGVSIDKSH 60

Query: 61 SGKEYLSKEVGSFISTGTELDFA 83
                     +   +   +  A
Sbjct: 61 GPFRPSEFPADTVSFSADAIAMA 83



 Score = 38.3 bits (87), Expect = 0.86,   Method: Composition-based stats.
 Identities = 7/44 (15%), Positives = 17/44 (38%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
             G +E SN +   E+          ++ T +I   ++ +   +
Sbjct: 82  MAGLVEGSNTDITREIVNSSVNQYSVSANTGVIRSQDEMIGTLL 125


>gi|187778686|ref|ZP_02995159.1| hypothetical protein CLOSPO_02281 [Clostridium sporogenes ATCC
          15579]
 gi|187772311|gb|EDU36113.1| hypothetical protein CLOSPO_02281 [Clostridium sporogenes ATCC
          15579]
          Length = 624

 Score = 52.9 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 21/39 (53%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
           NIG +   A +  ++T + N++N +T G+   +V+   
Sbjct: 11 LNIGKSGMFAQQGAINTTSHNIANANTEGYSRQRVELQT 49



 Score = 39.9 bits (91), Expect = 0.34,   Method: Composition-based stats.
 Identities = 4/40 (10%), Positives = 14/40 (35%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           S  +   E   ++     + +   +I   ++ +   I  +
Sbjct: 583 SGVSLDEEFANLVQFNHCYQANAKIISTVDQLLDVVINGL 622


>gi|134300249|ref|YP_001113745.1| flagellar basal-body rod protein FlgC [Desulfotomaculum reducens
          MI-1]
 gi|134052949|gb|ABO50920.1| flagellar basal-body rod protein FlgC [Desulfotomaculum reducens
          MI-1]
          Length = 145

 Score = 52.9 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 11/88 (12%), Positives = 29/88 (32%), Gaps = 9/88 (10%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVG---------FRTIKVKFSEVVGAIKNDIDQ 54
          SF I  +   +   RL  +++N++N +T           +R     F+E +    +    
Sbjct: 6  SFGISASGMTSERLRLDLISNNIANMNTPSRPNDPNSPVYRRRVPIFAEQLRQTISTKGV 65

Query: 55 KISFVASGKEYLSKEVGSFISTGTELDF 82
          +        + ++++             
Sbjct: 66 EPKGAGVRVKAITEDPAPPRIVNDPSHP 93



 Score = 52.2 bits (123), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 21/42 (50%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G +   N N + EM  MI  ++ + +  T ++  +   L+A+
Sbjct: 99  GNVAYPNINIVNEMVDMITASRTYEANVTALNAAKSMALKAL 140


>gi|114562340|ref|YP_749853.1| flagellar basal body rod protein FlgC [Shewanella frigidimarina
           NCIMB 400]
 gi|114333633|gb|ABI71015.1| flagellar basal-body rod protein FlgC [Shewanella frigidimarina
           NCIMB 400]
          Length = 138

 Score = 52.9 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 20/43 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           GF+   N N M EM  MI  ++ +     + D  +  + + +R
Sbjct: 93  GFIYKPNVNVMEEMADMISASRSYQMNVQVADATKSMLQQTLR 135



 Score = 39.9 bits (91), Expect = 0.33,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 29/86 (33%), Gaps = 7/86 (8%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFS-EVVGAIKNDIDQK 55
            FN+  +   A   RL+T A N++N D+V       +R     F  E++ A        
Sbjct: 5  NIFNVSGSGMSAQSVRLNTTASNIANADSVSSSVDKTYRARHPVFEAEMLKANSQQNSSP 64

Query: 56 ISFVASGKEYLSKEVGSFISTGTELD 81
             V    E     +  +       D
Sbjct: 65 GVTVKGIVESDKPLLKEYSPDHPMAD 90


>gi|197104256|ref|YP_002129633.1| flagellar hook-associated protein [Phenylobacterium zucineum HLK1]
 gi|196477676|gb|ACG77204.1| flagellar hook-associated protein [Phenylobacterium zucineum HLK1]
          Length = 700

 Score = 52.9 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 67/214 (31%), Gaps = 14/214 (6%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGF-RTIKVKFSEVVGAIKNDIDQKISFVASGK 63
                +   A +  L  V+DN++N +T G+ R   V+   VV  +   +  +     +  
Sbjct: 7   LQTAASGLNAAQASLRAVSDNIANVNTPGYVRKAVVQQPLVVDGVGMGVRVQGMKRITDD 66

Query: 64  EYLSKEVGSFISTGTELDFALE---GDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
              S  + +   +      A       + F   S  G   +R         G+  +A+  
Sbjct: 67  YLQSASLTAASDSSRWAAVAQYLDNAQSLFGDPSSPGFFFSRLDEI----YGAFATAADD 122

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
                + S  I   Q           ++S+ G  + T     +D +   + + +   +  
Sbjct: 123 PSSSLLRSQSIANIQDFLAEADRINSQLSELGGTVETRITADIDRANDLLAQVDRLNAEI 182

Query: 181 IPPTPLEDLSGVT--VKRGFL-EDS---NANSMY 208
                +   +  +  ++   L E S   N     
Sbjct: 183 SRAKMVNADASGSENIQSQLLDELSSLMNVRVAR 216



 Score = 39.9 bits (91), Expect = 0.35,   Method: Composition-based stats.
 Identities = 11/66 (16%), Positives = 23/66 (34%), Gaps = 2/66 (3%)

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            N+  +     +    L+  T +R  +E    N   E+  M    Q FN+   ++   + 
Sbjct: 634 RNAASAETRKESAAAVLNEATARRQSVEG--VNLDEELVNMTTYQQAFNASARMVQAAKD 691

Query: 233 SMLEAI 238
                +
Sbjct: 692 LFDVLL 697


>gi|163738064|ref|ZP_02145480.1| flagellar basal-body rod protein FlgC [Phaeobacter gallaeciensis
          BS107]
 gi|163742540|ref|ZP_02149926.1| flagellar basal-body rod protein FlgC [Phaeobacter gallaeciensis
          2.10]
 gi|161384125|gb|EDQ08508.1| flagellar basal-body rod protein FlgC [Phaeobacter gallaeciensis
          2.10]
 gi|161388680|gb|EDQ13033.1| flagellar basal-body rod protein FlgC [Phaeobacter gallaeciensis
          BS107]
          Length = 130

 Score = 52.9 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/42 (38%), Positives = 23/42 (54%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44
           S ++  +A  A   RL  V++N+SN DT G+R   V F  V
Sbjct: 6  KSLSVSASALKAQASRLRHVSENISNADTPGYRRKTVPFEAV 47



 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 6/38 (15%), Positives = 15/38 (39%)

Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
            G  E SN + M E+       + + +   + ++  + 
Sbjct: 83  SGHYEGSNVDLMIEIADAREAQRSYEANLKMFEQGRQM 120


>gi|123442786|ref|YP_001006763.1| flagellar basal body rod protein FlgC [Yersinia enterocolitica
           subsp. enterocolitica 8081]
 gi|332161320|ref|YP_004297897.1| flagellar basal body rod protein FlgC [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|2494525|sp|Q56894|FLGC_YEREN RecName: Full=Flagellar basal-body rod protein flgC
 gi|793899|emb|CAA88193.1| flgC [Yersinia enterocolitica]
 gi|122089747|emb|CAL12600.1| flagellar basal-body rod protein FlgC [Yersinia enterocolitica
           subsp. enterocolitica 8081]
 gi|325665550|gb|ADZ42194.1| flagellar basal body rod protein FlgC [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|330860608|emb|CBX70905.1| flagellar basal-body rod protein flgC [Yersinia enterocolitica
           W22703]
          Length = 134

 Score = 52.9 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 20/43 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N +   EM   I  ++ + +   +++  +  ML+ + 
Sbjct: 89  GYVRMPNVDVTGEMVNTISASRSYQANVEVLNTTKSLMLKTLT 131



 Score = 38.3 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 22/58 (37%), Gaps = 6/58 (10%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSEVVGAIKNDID 53
             F+I  +A  A  QRL+  A NM+N     G     +R  +V F       +    
Sbjct: 4  LNIFDIAGSALSAQSQRLNVSASNMANADSVTGPDGQPYRAKQVVFQVAAQPGQETGG 61


>gi|238785499|ref|ZP_04629482.1| Flagellar basal-body rod protein flgC [Yersinia bercovieri ATCC
           43970]
 gi|238799105|ref|ZP_04642561.1| Flagellar basal-body rod protein flgC [Yersinia mollaretii ATCC
           43969]
 gi|238713601|gb|EEQ05630.1| Flagellar basal-body rod protein flgC [Yersinia bercovieri ATCC
           43970]
 gi|238717052|gb|EEQ08912.1| Flagellar basal-body rod protein flgC [Yersinia mollaretii ATCC
           43969]
          Length = 134

 Score = 52.9 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 20/43 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N +   EM   I  ++ + +   +++  +  ML+ + 
Sbjct: 89  GYVRMPNVDVTGEMVNTISASRSYQANVEVLNTTKSLMLKTLT 131



 Score = 39.1 bits (89), Expect = 0.61,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 26/68 (38%), Gaps = 6/68 (8%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSEVVGAIKNDIDQK 55
             F+I  +A  A  QRL+  A NM+N     G     +R  +V F       +     +
Sbjct: 4  LNIFDIAGSALSAQSQRLNVSASNMANADSVTGPDGQPYRAKQVVFQVAAQPGQETGGVR 63

Query: 56 ISFVASGK 63
          +S V    
Sbjct: 64 VSQVVDDP 71


>gi|258511368|ref|YP_003184802.1| flagellar basal-body rod protein FlgB [Alicyclobacillus
          acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257478094|gb|ACV58413.1| flagellar basal-body rod protein FlgB [Alicyclobacillus
          acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 134

 Score = 52.9 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 21/49 (42%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
          +A  A   R +  A+N++N  T G++   V F  ++ +     D     
Sbjct: 9  SALDASTLRQAVYANNIANAGTPGYKRQDVAFETLLQSALGSGDSNALG 57


>gi|312135425|ref|YP_004002763.1| flagellar hook-associated protein flgk [Caldicellulosiruptor
           owensensis OL]
 gi|311775476|gb|ADQ04963.1| flagellar hook-associated protein FlgK [Caldicellulosiruptor
           owensensis OL]
          Length = 525

 Score = 52.9 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 18/173 (10%), Positives = 47/173 (27%), Gaps = 11/173 (6%)

Query: 70  VGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASV 129
                + G  L+    G  +F     +     R  +        L + +  Y    +   
Sbjct: 360 FNELHTQGWSLNGQNTGINFFEPPVGQTFFYARYIKVSDAIMNDLNNIATTYDASSLPGG 419

Query: 130 PIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL 189
              +    ++ N     +  +    + ++       SQG         + N      +  
Sbjct: 420 NDLVVDMLKLRNDTSIFKEGRFEDFLKSLISNLGVDSQG-----AKNFAENQKVMVTQLD 474

Query: 190 SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           +      G       +   EM  +I     F +   +I+  ++ +   +  + 
Sbjct: 475 NRRQAVSG------VSIDEEMTNLIKYQHGFQASARMINAFDEMLDVIVNRLG 521



 Score = 43.3 bits (100), Expect = 0.027,   Method: Composition-based stats.
 Identities = 11/77 (14%), Positives = 21/77 (27%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
             I         + L   + N++N  T G+    +       + K         V  G 
Sbjct: 5  GLEIARTGIFVNRKGLEVTSHNVANASTPGYTRQVLNVKSNPPSAKVGFYSPKFQVGMGA 64

Query: 64 EYLSKEVGSFISTGTEL 80
          +  S E    +    + 
Sbjct: 65 DVQSLEQIRNMFLDMQY 81


>gi|296452609|ref|ZP_06894303.1| flagellar hook-associated protein FlgK [Clostridium difficile
          NAP08]
 gi|296880979|ref|ZP_06904925.1| flagellar hook-associated protein FlgK [Clostridium difficile
          NAP07]
 gi|296258570|gb|EFH05471.1| flagellar hook-associated protein FlgK [Clostridium difficile
          NAP08]
 gi|296428000|gb|EFH13901.1| flagellar hook-associated protein FlgK [Clostridium difficile
          NAP07]
          Length = 436

 Score = 52.9 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 33/77 (42%), Gaps = 4/77 (5%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE----VVGAIKNDIDQKISF 58
          +  N   +   + ++ + T++ N+SN DT G+   + +F+      + ++ N I +    
Sbjct: 6  SILNTANSGMNSHQKAIQTISHNISNLDTEGYSRQRTEFATNSPMYMPSLSNSIGRGQLG 65

Query: 59 VASGKEYLSKEVGSFIS 75
                 +++   SF  
Sbjct: 66 TGVHVTDVTRARNSFYD 82



 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 6/40 (15%), Positives = 17/40 (42%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           S  +   EM ++I + + + +   ++    + +   I  I
Sbjct: 396 SGVSLDEEMTELIKIQRSYQASAKVMSTAVQLLDVVINGI 435


>gi|22126392|ref|NP_669815.1| flagellar basal body rod protein FlgC [Yersinia pestis KIM 10]
 gi|45441411|ref|NP_992950.1| flagellar basal body rod protein FlgC [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51596009|ref|YP_070200.1| flagellar basal body rod protein FlgC [Yersinia pseudotuberculosis
           IP 32953]
 gi|108807171|ref|YP_651087.1| flagellar basal body rod protein FlgC [Yersinia pestis Antiqua]
 gi|108812485|ref|YP_648252.1| flagellar basal body rod protein FlgC [Yersinia pestis Nepal516]
 gi|145598612|ref|YP_001162688.1| flagellar basal body rod protein FlgC [Yersinia pestis Pestoides F]
 gi|149366253|ref|ZP_01888288.1| flagellar basal-body rod protein FlgC [Yersinia pestis CA88-4125]
 gi|153947032|ref|YP_001401292.1| flagellar basal body rod protein FlgC [Yersinia pseudotuberculosis
           IP 31758]
 gi|162420507|ref|YP_001606471.1| flagellar basal body rod protein FlgC [Yersinia pestis Angola]
 gi|165926046|ref|ZP_02221878.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165938792|ref|ZP_02227347.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166010857|ref|ZP_02231755.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166211044|ref|ZP_02237079.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167401147|ref|ZP_02306650.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167420240|ref|ZP_02311993.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167425758|ref|ZP_02317511.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167469718|ref|ZP_02334422.1| flagellar basal-body rod protein FlgC [Yersinia pestis FV-1]
 gi|170024649|ref|YP_001721154.1| flagellar basal body rod protein FlgC [Yersinia pseudotuberculosis
           YPIII]
 gi|186895112|ref|YP_001872224.1| flagellar basal body rod protein FlgC [Yersinia pseudotuberculosis
           PB1/+]
 gi|218928920|ref|YP_002346795.1| flagellar basal body rod protein FlgC [Yersinia pestis CO92]
 gi|229896240|ref|ZP_04511410.1| flagellar basal-body rod protein FlgC [Yersinia pestis Pestoides A]
 gi|229897175|ref|ZP_04512331.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229897901|ref|ZP_04513052.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229902867|ref|ZP_04517984.1| flagellar basal-body rod protein FlgC [Yersinia pestis Nepal516]
 gi|270486647|ref|ZP_06203721.1| flagellar basal-body rod protein FlgC [Yersinia pestis KIM D27]
 gi|294504032|ref|YP_003568094.1| flagellar basal body rod protein [Yersinia pestis Z176003]
 gi|21959379|gb|AAM86066.1|AE013854_2 cell-proximal portion of basal-body rod protein [Yersinia pestis
           KIM 10]
 gi|45436272|gb|AAS61827.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51589291|emb|CAH20912.1| flagellar basal-body rod protein FlgC [Yersinia pseudotuberculosis
           IP 32953]
 gi|108776133|gb|ABG18652.1| flagellar basal-body rod protein FlgC [Yersinia pestis Nepal516]
 gi|108779084|gb|ABG13142.1| flagellar basal-body rod protein FlgC [Yersinia pestis Antiqua]
 gi|115347531|emb|CAL20440.1| flagellar basal-body rod protein FlgC [Yersinia pestis CO92]
 gi|145210308|gb|ABP39715.1| flagellar basal-body rod protein FlgC [Yersinia pestis Pestoides F]
 gi|149292666|gb|EDM42740.1| flagellar basal-body rod protein FlgC [Yersinia pestis CA88-4125]
 gi|152958527|gb|ABS45988.1| flagellar basal-body rod protein FlgC [Yersinia pseudotuberculosis
           IP 31758]
 gi|162353322|gb|ABX87270.1| flagellar basal-body rod protein FlgC [Yersinia pestis Angola]
 gi|165913406|gb|EDR32028.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165922250|gb|EDR39427.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165990201|gb|EDR42502.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166208224|gb|EDR52704.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|166961935|gb|EDR57956.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167049536|gb|EDR60944.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167055157|gb|EDR64954.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|169751183|gb|ACA68701.1| flagellar basal-body rod protein FlgC [Yersinia pseudotuberculosis
           YPIII]
 gi|186698138|gb|ACC88767.1| flagellar basal-body rod protein FlgC [Yersinia pseudotuberculosis
           PB1/+]
 gi|229680314|gb|EEO76413.1| flagellar basal-body rod protein FlgC [Yersinia pestis Nepal516]
 gi|229688942|gb|EEO81007.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229693512|gb|EEO83561.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229701163|gb|EEO89192.1| flagellar basal-body rod protein FlgC [Yersinia pestis Pestoides A]
 gi|262361782|gb|ACY58503.1| flagellar basal body rod protein [Yersinia pestis D106004]
 gi|262366082|gb|ACY62639.1| flagellar basal body rod protein [Yersinia pestis D182038]
 gi|270335151|gb|EFA45928.1| flagellar basal-body rod protein FlgC [Yersinia pestis KIM D27]
 gi|294354491|gb|ADE64832.1| flagellar basal body rod protein [Yersinia pestis Z176003]
 gi|320015469|gb|ADV99040.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 134

 Score = 52.9 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 20/43 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N +   EM   I  ++ + +   +++  +  ML+ + 
Sbjct: 89  GYVRMPNVDVTGEMVNTISASRSYQANVEVLNTTKSLMLKTLT 131



 Score = 39.5 bits (90), Expect = 0.41,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 26/80 (32%), Gaps = 6/80 (7%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSEVVGAIKNDIDQK 55
             F+I  +A  A  QR++  A N++N     G     +R  +V F       +     +
Sbjct: 4  LNIFDIAGSALSAQSQRMNVSASNLANADSVTGPDGQPYRAKQVVFQVAAQPGQETGGVR 63

Query: 56 ISFVASGKEYLSKEVGSFIS 75
          ++ +                
Sbjct: 64 VAQIVDDPSPDRLVYQPGNP 83


>gi|322832562|ref|YP_004212589.1| flagellar basal-body rod protein FlgC [Rahnella sp. Y9602]
 gi|321167763|gb|ADW73462.1| flagellar basal-body rod protein FlgC [Rahnella sp. Y9602]
          Length = 134

 Score = 52.9 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 6/43 (13%), Positives = 22/43 (51%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G+++  N + + EM   I  ++ + +   +++  +  M++ + 
Sbjct: 89  GYVQMPNVDVVSEMVNTISASRSYQANVEVLNTTKSLMMKTLT 131



 Score = 39.9 bits (91), Expect = 0.33,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 29/102 (28%), Gaps = 7/102 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS-EVVGAIKNDID 53
           M   F+I  +A  A  QRL+  A NM+N     G     ++  +V F  +     +    
Sbjct: 3   MLGIFDIAGSALAAQSQRLNVSASNMANADSVTGPDGKPYKAKQVVFQVDAAPGQETGGV 62

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP 95
           +    V                   +    +      +    
Sbjct: 63  KVAQVVDDPAPMRMVYEPGNPMADAKGYVQMPNVDVVSEMVN 104


>gi|297617135|ref|YP_003702294.1| flagellar basal-body rod protein FlgB [Syntrophothermus
          lipocalidus DSM 12680]
 gi|297144972|gb|ADI01729.1| flagellar basal-body rod protein FlgB [Syntrophothermus
          lipocalidus DSM 12680]
          Length = 138

 Score = 52.9 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 29/70 (41%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A      R   +A+N++N DT G++ ++V F E +     +   + +   +   +L    
Sbjct: 17 ALDGAMLRQKVIANNLANVDTPGYKAMEVTFEEQLKNSMKEAGSEYNLKTTHPRHLQIPN 76

Query: 71 GSFISTGTEL 80
           S    G  +
Sbjct: 77 ISSFQVGINV 86


>gi|260893878|ref|YP_003239975.1| flagellar basal-body rod protein FlgB [Ammonifex degensii KC4]
 gi|260866019|gb|ACX53125.1| flagellar basal-body rod protein FlgB [Ammonifex degensii KC4]
          Length = 133

 Score = 52.9 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 27/79 (34%), Gaps = 2/79 (2%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ--KISFVASGKEYLSKE 69
            A   R   +ADN++N DT GF+   V+F E +    N                   ++
Sbjct: 16 LDAAALRQRVIADNLANVDTPGFKKGVVRFEEELKRALNAPLPLRTTDPRHFPSPVPLEK 75

Query: 70 VGSFISTGTELDFALEGDA 88
          V   +          +G+ 
Sbjct: 76 VSPRVERDYFTSMRADGNN 94


>gi|320173527|gb|EFW48723.1| Flagellar basal-body rod protein FlgC [Shigella dysenteriae CDC
           74-1112]
          Length = 134

 Score = 52.9 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 6/43 (13%), Positives = 22/43 (51%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G+++  N + + EM   +  ++ + +   +++  +  ML+ + 
Sbjct: 89  GYVKMPNVDVVGEMVNTMSASRSYQANVEVLNTVKSMMLKTLT 131



 Score = 37.9 bits (86), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 6/47 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42
             F+I  +A  A  QRL+  A N++N     G     +R  +V F 
Sbjct: 4  LNIFDIAGSALTAQFQRLNVAASNLANADSVTGPDGQPYRAKQVVFQ 50


>gi|238755326|ref|ZP_04616669.1| Flagellar basal-body rod protein flgC [Yersinia ruckeri ATCC 29473]
 gi|238706462|gb|EEP98836.1| Flagellar basal-body rod protein flgC [Yersinia ruckeri ATCC 29473]
 gi|253317693|gb|ACT22782.1| flagellar basal body rod protein FlgC [Yersinia ruckeri]
          Length = 134

 Score = 52.9 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N + + EM   I  ++ + +   +++  +  ML+ + 
Sbjct: 89  GYVRMPNVDVVGEMVNTISASRSYQANVEVLNTTKSMMLKTLT 131



 Score = 36.4 bits (82), Expect = 3.4,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 6/47 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42
             F+I  +A  A  QR++  A NM+N     G     +R  +V F 
Sbjct: 4  LNIFDIAGSALSAQSQRMNVSASNMANADSVTGPDGQPYRAKQVVFQ 50


>gi|90021857|ref|YP_527684.1| flagellar basal body rod protein FlgC [Saccharophagus degradans
           2-40]
 gi|89951457|gb|ABD81472.1| flagellar basal-body rod protein FlgC [Saccharophagus degradans
           2-40]
          Length = 144

 Score = 52.9 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 18/139 (12%), Positives = 37/139 (26%), Gaps = 6/139 (4%)

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           T              +AS        +S    + +         +    Q          
Sbjct: 9   TAGSGMNAQSVRLNTTASNIANAETASSSADTVYRGRHPVFATVQAGYMQGQVGALDDEQ 68

Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
                  G V  +        P  P  D        G++   N N + EM  MI  ++ F
Sbjct: 69  EMGVQVMGIVESDAPLQRRYEPGHPQADEE------GYVHYPNVNIVEEMANMISASRSF 122

Query: 221 NSITTLIDENEKSMLEAIR 239
                +++  ++ +   ++
Sbjct: 123 QMNVEVMNSAKQMVQRVLQ 141



 Score = 36.8 bits (83), Expect = 2.5,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 20/53 (37%), Gaps = 6/53 (11%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDT------VGFRTIKVKFSEVVGAIKND 51
          F+   +   A   RL+T A N++N +T        +R     F+ V       
Sbjct: 7  FDTAGSGMNAQSVRLNTTASNIANAETASSSADTVYRGRHPVFATVQAGYMQG 59


>gi|193069522|ref|ZP_03050476.1| flagellar basal-body rod protein FlgC [Escherichia coli E110019]
 gi|192957270|gb|EDV87719.1| flagellar basal-body rod protein FlgC [Escherichia coli E110019]
          Length = 134

 Score = 52.9 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 6/43 (13%), Positives = 22/43 (51%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G+++  N + + EM   +  ++ + +   +++  +  ML+ + 
Sbjct: 89  GYVKMPNVDVVGEMVNTMSASRSYQANVEVLNTVKSMMLKTLT 131



 Score = 36.0 bits (81), Expect = 4.7,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 20/47 (42%), Gaps = 6/47 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42
             F+I  +A  A  QRL+    N++N     G     +R  +V F 
Sbjct: 4  LNIFDIAGSALTAQSQRLNVAVSNLANADSVTGPDGQPYRAKQVVFQ 50


>gi|260767771|ref|ZP_05876706.1| flagellar basal-body rod protein FlgC [Vibrio furnissii CIP 102972]
 gi|260617280|gb|EEX42464.1| flagellar basal-body rod protein FlgC [Vibrio furnissii CIP 102972]
 gi|315179397|gb|ADT86311.1| flagellar basal-body rod protein FlgC [Vibrio furnissii NCTC 11218]
          Length = 138

 Score = 52.9 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 23/43 (53%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N M EM  MI  ++ + +   + D +++ +L  ++
Sbjct: 93  GYIYKPNVNVMEEMANMISASRSYQTNVQVADASKQMLLRTLQ 135



 Score = 35.2 bits (79), Expect = 7.2,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 26/62 (41%), Gaps = 6/62 (9%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56
            FN+  +A  A   RL+T + N++N D+V       ++     F   +   + + D  +
Sbjct: 5  NVFNVTGSAMSAESVRLNTTSSNLANADSVSSSAKDTYKARHAVFGAELSKARYNRDPNV 64

Query: 57 SF 58
            
Sbjct: 65 PV 66


>gi|298529920|ref|ZP_07017322.1| flagellar hook-associated protein FlgK [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298509294|gb|EFI33198.1| flagellar hook-associated protein FlgK [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 701

 Score = 52.9 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 15/39 (38%)

Query: 200 EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           E S  N   EM  +I     + +   +I   ++ M   +
Sbjct: 659 EKSGVNLDEEMSNLIKYQHSYQAAARMISTADQMMQTLL 697



 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 24/77 (31%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
           N G  A  A +  + T  +N++N +T G+R  +V+  E +              A    
Sbjct: 8  MNSGRTALFANQSAIQTTGNNIANVNTEGYRRREVRLEEAMALDTAPGQIGTGVNAKEVF 67

Query: 65 YLSKEVGSFISTGTELD 81
                          D
Sbjct: 68 RHFDSFIETQYNDKSSD 84


>gi|269796409|ref|YP_003315864.1| flagellar hook-associated protein FlgK [Sanguibacter keddieii DSM
          10542]
 gi|269098594|gb|ACZ23030.1| flagellar hook-associated protein FlgK [Sanguibacter keddieii DSM
          10542]
          Length = 475

 Score = 52.9 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 10/58 (17%), Positives = 23/58 (39%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          +  +  L++ +   Q L     N++N +T G+   +V    V       +  + + V 
Sbjct: 5  SGLSTALSSLITQRQALEVAGQNLANINTPGYTRQRVDMQSVSAGQGATMFSQGNQVG 62



 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 3/39 (7%), Positives = 13/39 (33%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            +   E   M+   + +     ++   ++ + + I    
Sbjct: 433 VDQDEESINMLSFQRAYQGAARVMTAVDEMLDQLINRTG 471


>gi|84388089|ref|ZP_00990985.1| flagellar basal body rod protein [Vibrio splendidus 12B01]
 gi|84377156|gb|EAP94026.1| flagellar basal body rod protein [Vibrio splendidus 12B01]
          Length = 137

 Score = 52.9 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 23/43 (53%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N M EM  MI  ++ + +   + D +++ +L  ++
Sbjct: 92  GYIYKPNVNVMEEMANMISASRAYQTNVQVADSSKQMLLRTLQ 134



 Score = 36.4 bits (82), Expect = 3.2,   Method: Composition-based stats.
 Identities = 15/81 (18%), Positives = 27/81 (33%), Gaps = 6/81 (7%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56
            FN+  +A  A   RL+T + N++N D+V       ++     F   +   +N      
Sbjct: 5  NVFNVTGSAMSAESVRLNTTSSNLANADSVSSSAEETYKARHAVFGAELNKARNSGHTVP 64

Query: 57 SFVASGKEYLSKEVGSFISTG 77
            V    E        +    
Sbjct: 65 VKVLGIVESDKPLSAEYNPDH 85


>gi|301168116|emb|CBW27702.1| flagellar basal-body rod protein [Bacteriovorax marinus SJ]
          Length = 135

 Score = 52.9 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 8/64 (12%), Positives = 26/64 (40%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
            +     ++    + R   ++ N++N +T G++  +V F + +    +   Q+      
Sbjct: 5  DKTLKALASSLNFRQMRQEIISSNIANAETPGYKAKRVDFEQALARALDVDGQQQLNTED 64

Query: 62 GKEY 65
           + +
Sbjct: 65 SRHF 68


>gi|293409440|ref|ZP_06653016.1| flagellar basal-body rod protein FlgC [Escherichia coli B354]
 gi|291469908|gb|EFF12392.1| flagellar basal-body rod protein FlgC [Escherichia coli B354]
          Length = 134

 Score = 52.9 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 6/43 (13%), Positives = 22/43 (51%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G+++  N + + EM   +  ++ + +   +++  +  ML+ + 
Sbjct: 89  GYVKMPNVDVVGEMVNTMSASRSYQANVEVLNTVKSMMLKTLT 131



 Score = 39.1 bits (89), Expect = 0.54,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 6/47 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42
             F+I  +A  A  QRL+  A N++N     G     +R  +V F 
Sbjct: 4  LNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRAKQVVFQ 50


>gi|170682563|ref|YP_001744106.1| flagellar basal body rod protein FlgC [Escherichia coli SMS-3-5]
 gi|170520281|gb|ACB18459.1| flagellar basal-body rod protein FlgC [Escherichia coli SMS-3-5]
          Length = 134

 Score = 52.9 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 6/43 (13%), Positives = 22/43 (51%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G+++  N + + EM   +  ++ + +   +++  +  ML+ + 
Sbjct: 89  GYVKMPNVDVVGEMVNTMSASRSYQANVEVLNTVKSMMLKTLT 131



 Score = 38.7 bits (88), Expect = 0.79,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 6/47 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDT-VG-----FRTIKVKFS 42
             F+I  +A  A  QRL+  A N++N D+  G     +R  +V F 
Sbjct: 4  LNIFDIAGSALTAQSQRLNVAASNLANADSLTGPDGQPYRAKQVVFQ 50


>gi|54294169|ref|YP_126584.1| flagellar hook-associated protein FlgK [Legionella pneumophila str.
           Lens]
 gi|53754001|emb|CAH15472.1| flagellar hook-associated protein 1 [Legionella pneumophila str.
           Lens]
          Length = 649

 Score = 52.9 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 18/132 (13%), Positives = 49/132 (37%), Gaps = 1/132 (0%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
            +  NI  +   A ++ L    +N++N  T G+    ++F+ +  + +       + V+ 
Sbjct: 1   MSILNIAYSGLNAFQRALDVTGNNIANFKTRGYSRQSIQFTPI-ASNRYAGSYIGAGVSV 59

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
              Y + +  +     + L +  + DA++        +L++DG        +   + G+ 
Sbjct: 60  SSIYRNVDQFANAQVRSTLSYRTQYDAFYNQAIQIDKLLSQDGSSISAPLQTFFDSIGQL 119

Query: 122 PVLDMASVPIQI 133
                      +
Sbjct: 120 NSTPDNIATRGV 131


>gi|163750572|ref|ZP_02157810.1| flagellar basal-body rod protein FlgC [Shewanella benthica KT99]
 gi|161329727|gb|EDQ00716.1| flagellar basal-body rod protein FlgC [Shewanella benthica KT99]
          Length = 139

 Score = 52.9 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 20/43 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           GF+   N N M EM  MI  ++ +     + +  +  + + +R
Sbjct: 93  GFIYKPNVNVMEEMANMISASRSYQMNVQVAEAAKSMLQQTLR 135



 Score = 39.1 bits (89), Expect = 0.61,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 31/86 (36%), Gaps = 7/86 (8%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKF-SEVVGAIKNDIDQK 55
            FN+  +   A   RL+T A N++N D+V       +R     F +E++ A        
Sbjct: 5  NIFNVAGSGMSAQSIRLNTTASNIANADSVSSSVDKTYRARHPIFAAEMLKASYQQQSSP 64

Query: 56 ISFVASGKEYLSKEVGSFISTGTELD 81
             V    E  +  +  +       D
Sbjct: 65 SVVVKGIVESDAPLLKEYSPNHPMAD 90


>gi|91776307|ref|YP_546063.1| flagellar basal-body rod protein FlgC [Methylobacillus flagellatus
           KT]
 gi|91710294|gb|ABE50222.1| flagellar basal-body rod protein FlgC [Methylobacillus flagellatus
           KT]
          Length = 135

 Score = 52.9 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 20/43 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N   EM  MI  ++ + +    ++  +  +L+ + 
Sbjct: 90  GYVAMPNVNVTEEMVNMISASRSYQNNVETMNAAKSMLLKTLT 132



 Score = 36.4 bits (82), Expect = 4.0,   Method: Composition-based stats.
 Identities = 23/92 (25%), Positives = 32/92 (34%), Gaps = 8/92 (8%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNT----DTVG--FRTIKVKFSEVVGAIKNDID--Q 54
            FNI  +A  A  QRL+ VA N++N      + G  +RT  + FS V    K D    +
Sbjct: 5  NVFNISGSAMSAQGQRLNVVASNLANADSVTSSNGQPYRTKHIVFSAVPVNAKGDAQGVK 64

Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEG 86
              V        K              A+  
Sbjct: 65 VQQIVEDQAPPQLKYDPKHPLADANGYVAMPN 96


>gi|150390489|ref|YP_001320538.1| flagellar basal-body rod protein FlgC [Alkaliphilus metalliredigens
           QYMF]
 gi|149950351|gb|ABR48879.1| flagellar basal-body rod protein FlgC [Alkaliphilus metalliredigens
           QYMF]
          Length = 147

 Score = 52.9 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 23/42 (54%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N + + EM  MI  T+ + + TT ++  +   ++A+
Sbjct: 102 GYVLMPNVDIVVEMANMISATRAYEANTTALNATKSMAMKAL 143



 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/127 (14%), Positives = 38/127 (29%), Gaps = 19/127 (14%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE------------- 43
            + N   +   A   R+ T++ N++N +T     G  ++   V F               
Sbjct: 5   NAINTSASGLTAERFRMDTISKNIANANTTRTPNGSPYKRQVVLFQSKEDAKGFSSQLER 64

Query: 44  VVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103
           ++   +     ++  V +      +          E  + L  +    +E    I  TR 
Sbjct: 65  IMNNNEKPGGVEVVGVKNDSSPYRQVYDPGHPDANEEGYVLMPNVDIVVEMANMISATRA 124

Query: 104 GRFKVTD 110
                T 
Sbjct: 125 YEANTTA 131


>gi|88799029|ref|ZP_01114610.1| Flagellar hook-associated protein [Reinekea sp. MED297]
 gi|88778256|gb|EAR09450.1| Flagellar hook-associated protein [Reinekea sp. MED297]
          Length = 1025

 Score = 52.9 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 17/42 (40%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
           +  +  +    A +  L T   N+SN +T G+   +   + 
Sbjct: 1  MSLLSTAITGIKAHQTALETTGHNISNANTPGYSRQEAVMAT 42



 Score = 37.5 bits (85), Expect = 1.5,   Method: Composition-based stats.
 Identities = 24/220 (10%), Positives = 60/220 (27%), Gaps = 23/220 (10%)

Query: 36   TIKVKFSEVVGAIKNDIDQK----------ISFVASGKEYLSKEVGSFISTGTELDFALE 85
             +K  F E + A  +   +              V    E    +  S ++ G ++D  + 
Sbjct: 809  AVKAAFEEQIQAQLDSPGRAEVDIDEQGNVSYKVFMRVEGTGTQAVSRVNVGGQVDVVMA 868

Query: 86   GDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEK 145
                   +   G I       + +  G      G+    D  ++        +  N  + 
Sbjct: 869  DGIRLETDPEVGGIFNGVPDARSSYMGFQFQVGGRPEAGDEFTIEWNDAGVSDNRNALDL 928

Query: 146  GEISQKGKVIATMGLYSVDMS-----QGFVRRENSGISPNIPPTPLEDLSGVTV--KRGF 198
              +     +    G  +   S     +      +     +     + + +   V   +G 
Sbjct: 929  VGLETTDTINDIDGGMTFTESYSQTVEQIGTLTSQAQIRSDASRAVLEGTQSEVDSVQG- 987

Query: 199  LEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
                  N   E  ++I     +N+   +I   ++     +
Sbjct: 988  -----VNLDEEAARLIEFQVAYNANAKVIAVAQELFDSIL 1022


>gi|261339374|ref|ZP_05967232.1| flagellar basal-body rod protein FlgC [Enterobacter cancerogenus
           ATCC 35316]
 gi|288318175|gb|EFC57113.1| flagellar basal-body rod protein FlgC [Enterobacter cancerogenus
           ATCC 35316]
          Length = 134

 Score = 52.9 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 6/43 (13%), Positives = 22/43 (51%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G+++  N + + EM   +  ++ + +   +++  +  ML+ + 
Sbjct: 89  GYVKMPNVDVVGEMVNSMSASRSYQANVEVLNTVKSMMLKTLT 131



 Score = 39.5 bits (90), Expect = 0.42,   Method: Composition-based stats.
 Identities = 16/105 (15%), Positives = 28/105 (26%), Gaps = 7/105 (6%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFS-EVVGAIKNDIDQ 54
              F+I  +A  A  +RL+  A N++N D+V       +R  +V F  +          +
Sbjct: 4   LNIFDIAGSALTAQSKRLNVAASNLANADSVAGPDGQPYRAKQVVFQVDAAPGAATGGVK 63

Query: 55  KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
               V S                      +               
Sbjct: 64  VSDVVESQAPDKLVYEPGNPLADANGYVKMPNVDVVGEMVNSMSA 108


>gi|161503737|ref|YP_001570849.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160865084|gb|ABX21707.1| hypothetical protein SARI_01822 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 134

 Score = 52.9 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 6/43 (13%), Positives = 22/43 (51%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G+++  N + + EM   +  ++ + +   +++  +  ML+ + 
Sbjct: 89  GYVKMPNVDVVGEMVNTMSASRSYQANVEVLNTVKSMMLKTLT 131



 Score = 38.7 bits (88), Expect = 0.71,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 6/47 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42
             F+I  +A  A  +RL+  A N++N     G     +R  +V F 
Sbjct: 4  LNIFDIAGSALTAQSKRLNVAASNLANADSVTGPDGQPYRAKQVVFQ 50


>gi|78043872|ref|YP_359837.1| flagellar basal-body rod protein FlgB [Carboxydothermus
          hydrogenoformans Z-2901]
 gi|77995987|gb|ABB14886.1| flagellar basal-body rod protein FlgB [Carboxydothermus
          hydrogenoformans Z-2901]
          Length = 136

 Score = 52.9 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 21/55 (38%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65
             A   R   +A N++N +T G+R   V F E V    N      S   +   +
Sbjct: 15 GIDAATIRQQAIAHNIANVNTPGYRKEVVVFEEKVQEFLNQKKGNFSLKTTHPRH 69


>gi|254485520|ref|ZP_05098725.1| flagellar basal-body rod protein FlgC [Roseobacter sp. GAI101]
 gi|214042389|gb|EEB83027.1| flagellar basal-body rod protein FlgC [Roseobacter sp. GAI101]
          Length = 130

 Score = 52.9 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 21/44 (47%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46
           + ++  +   A   RL  +++N+SN DT G+R   V F     
Sbjct: 6  NALDVSSSGLRAQANRLRHLSENISNADTPGYRRKLVSFQTAFS 49



 Score = 39.5 bits (90), Expect = 0.44,   Method: Composition-based stats.
 Identities = 5/33 (15%), Positives = 13/33 (39%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
            SN N + E+       + + +   + ++  K 
Sbjct: 88  GSNVNLLIELADAKEAQRSYEANLKMFEQTRKM 120


>gi|82777311|ref|YP_403660.1| flagellar basal body rod protein FlgC [Shigella dysenteriae Sd197]
 gi|309788141|ref|ZP_07682747.1| flagellar basal-body rod protein FlgC [Shigella dysenteriae 1617]
 gi|81241459|gb|ABB62169.1| cell-proximal portion of basal-body rod [Shigella dysenteriae
           Sd197]
 gi|308923993|gb|EFP69494.1| flagellar basal-body rod protein FlgC [Shigella dysenteriae 1617]
          Length = 134

 Score = 52.9 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 6/43 (13%), Positives = 22/43 (51%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G+++  N + + EM   +  ++ + +   +++  +  ML+ + 
Sbjct: 89  GYVKMPNVDVVGEMVNTMSASRSYQANVEVLNTVKSMMLKTLT 131



 Score = 39.1 bits (89), Expect = 0.55,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 6/47 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42
             F+I  +A  A  QRL+  A N++N     G     +R  +V F 
Sbjct: 4  LNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRAKQVVFQ 50


>gi|312882661|ref|ZP_07742398.1| flagellar basal body rod protein FlgC [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309369622|gb|EFP97137.1| flagellar basal body rod protein FlgC [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 138

 Score = 52.9 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 23/43 (53%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N M EM  MI  ++ + +   + D +++ +L  ++
Sbjct: 93  GYIYKPNVNVMEEMANMISASRSYQTNVQVADASKQMLLRTLQ 135


>gi|296102910|ref|YP_003613056.1| flagellar basal body rod protein FlgC [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295057369|gb|ADF62107.1| flagellar basal body rod protein FlgC [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 134

 Score = 52.9 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 6/43 (13%), Positives = 22/43 (51%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G+++  N + + EM   +  ++ + +   +++  +  ML+ + 
Sbjct: 89  GYVKMPNVDVVGEMVNSMSASRSYQANVEVLNTVKSMMLKTLT 131



 Score = 39.1 bits (89), Expect = 0.55,   Method: Composition-based stats.
 Identities = 15/105 (14%), Positives = 26/105 (24%), Gaps = 7/105 (6%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS-EVVGAIKNDIDQ 54
              F+I  +A  A  +RL+  A N++N     G     +R  +V F  +          +
Sbjct: 4   LNIFDIAGSALTAQSKRLNVAASNLANADSVTGPDGQPYRAKQVVFQVDAAPGAATGGVK 63

Query: 55  KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
               V S                      +               
Sbjct: 64  VSDVVESQAPDKLVYEPGNPLADANGYVKMPNVDVVGEMVNSMSA 108


>gi|256833255|ref|YP_003161982.1| flagellar hook-associated protein FlgK [Jonesia denitrificans DSM
          20603]
 gi|256686786|gb|ACV09679.1| flagellar hook-associated protein FlgK [Jonesia denitrificans DSM
          20603]
          Length = 463

 Score = 52.9 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 6/40 (15%), Positives = 17/40 (42%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS 42
          +  +  L++  A    +     N++N +T G+   +   +
Sbjct: 5  SGLSTALSSLNAQRAAMEITGQNIANVNTPGYTRQRADMT 44



 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 2/39 (5%), Positives = 15/39 (38%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            ++  E   ++   + + +   ++   ++ + + I    
Sbjct: 421 VDTDEETVNLLSYQRAYQAAARVMTTVDEMLDQLINRTG 459


>gi|218288291|ref|ZP_03492590.1| flagellar basal-body rod protein FlgB [Alicyclobacillus
          acidocaldarius LAA1]
 gi|218241650|gb|EED08823.1| flagellar basal-body rod protein FlgB [Alicyclobacillus
          acidocaldarius LAA1]
          Length = 134

 Score = 52.9 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 21/49 (42%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
          +A  A   R +  A+N++N  T G++   V F  ++ +     D     
Sbjct: 9  SALDASTLRQAVYANNIANAGTPGYKRQDVAFETLLQSALGSGDSNALG 57


>gi|27363707|ref|NP_759235.1| flagellar basal body rod protein FlgC [Vibrio vulnificus CMCP6]
 gi|37679145|ref|NP_933754.1| flagellar basal body rod protein FlgC [Vibrio vulnificus YJ016]
 gi|320157111|ref|YP_004189490.1| flagellar basal-body rod protein FlgC [Vibrio vulnificus MO6-24/O]
 gi|27359823|gb|AAO08762.1| flagellar basal-body rod protein FlgC [Vibrio vulnificus CMCP6]
 gi|37197887|dbj|BAC93725.1| flagellar basal body rod protein FlgC [Vibrio vulnificus YJ016]
 gi|319932423|gb|ADV87287.1| flagellar basal-body rod protein FlgC [Vibrio vulnificus MO6-24/O]
          Length = 138

 Score = 52.9 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 23/43 (53%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N M EM  MI  ++ + +   + D +++ +L  ++
Sbjct: 93  GYIYKPNVNVMEEMANMISASRAYQTNVQVADASKQMLLRTLQ 135


>gi|307310148|ref|ZP_07589798.1| flagellar basal-body rod protein FlgC [Escherichia coli W]
 gi|306909866|gb|EFN40360.1| flagellar basal-body rod protein FlgC [Escherichia coli W]
 gi|315060352|gb|ADT74679.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli W]
 gi|320200970|gb|EFW75554.1| Flagellar basal-body rod protein FlgC [Escherichia coli EC4100B]
 gi|323379087|gb|ADX51355.1| flagellar basal-body rod protein FlgC [Escherichia coli KO11]
          Length = 134

 Score = 52.9 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 6/43 (13%), Positives = 22/43 (51%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G+++  N + + EM   +  ++ + +   +++  +  ML+ + 
Sbjct: 89  GYVKMPNVDVVGEMVNTMSASRSYQANVEVLNTVKSMMLKTLT 131



 Score = 39.1 bits (89), Expect = 0.55,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 6/47 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42
             F+I  +A  A  QRL+  A N++N     G     +R  +V F 
Sbjct: 4  LNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRAKQVVFQ 50


>gi|169831934|ref|YP_001717916.1| flagellar hook-associated protein FlgK [Candidatus Desulforudis
          audaxviator MP104C]
 gi|169638778|gb|ACA60284.1| flagellar hook-associated protein FlgK [Candidatus Desulforudis
          audaxviator MP104C]
          Length = 532

 Score = 52.9 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 8/55 (14%), Positives = 19/55 (34%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
             I   +    +Q ++T A N++N +T G++  +             +      
Sbjct: 5  GIEIARRSLHGHQQAMNTTAHNIANINTPGYKRQEAVLQSTPAIAYPSVFSPRPG 59



 Score = 51.0 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/80 (15%), Positives = 30/80 (37%), Gaps = 6/80 (7%)

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLED-----SNANSMYEMGQMIHLTQKFN 221
            G+ ++  +GI  ++        +   +  G +E      S  N   E+ +MI     + 
Sbjct: 453 DGYYQQLVTGIGADLNAAQRGRDNVSAIL-GQIEALRESVSGVNLDEELTRMIQYQYGYQ 511

Query: 222 SITTLIDENEKSMLEAIRNI 241
           +   +I   ++ +   I  +
Sbjct: 512 AAARVITVLDELLDTLINRM 531


>gi|170722894|ref|YP_001750582.1| flagellar basal body rod protein FlgC [Pseudomonas putida W619]
 gi|169760897|gb|ACA74213.1| flagellar basal-body rod protein FlgC [Pseudomonas putida W619]
          Length = 147

 Score = 52.9 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 32/73 (43%), Gaps = 6/73 (8%)

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
           +G +  +++  +   P  P  +      K G++   N N + EM  MI  ++ F +   L
Sbjct: 78  KGIIEDQSNLEARYEPNHPAAN------KDGYVYYPNVNVVEEMADMISASRAFQTNAEL 131

Query: 227 IDENEKSMLEAIR 239
           ++  +  M + + 
Sbjct: 132 MNTAKNMMQKVLT 144



 Score = 41.4 bits (95), Expect = 0.12,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 6/56 (10%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQ 54
          FNI  +   A   RL+TVA N++N +TV       +R     F+      +    Q
Sbjct: 7  FNIAGSGMSAQNTRLNTVASNIANAETVSSSIDQTYRARHPVFATTFQNAQAGGSQ 62


>gi|253996321|ref|YP_003048385.1| flagellar basal-body rod protein FlgC [Methylotenera mobilis JLW8]
 gi|253983000|gb|ACT47858.1| flagellar basal-body rod protein FlgC [Methylotenera mobilis JLW8]
          Length = 135

 Score = 52.9 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 20/43 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N   EM  MI  ++ + +    ++  +  +++ + 
Sbjct: 89  GYVSMPNVNVTEEMVNMISASRAYQNNVETMNATKTMLMKTLT 131



 Score = 41.4 bits (95), Expect = 0.13,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 40/107 (37%), Gaps = 8/107 (7%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTD-------TVGFRTIKVKFSEVVGAIKNDIDQK 55
             FNI  +A  A  QRL+TVA N++N D       T  +++ +V FS +     +    K
Sbjct: 5   NVFNISGSAMSAQAQRLNTVASNLANADSATSANGTP-YKSKQVVFSAMPSKSPDVSGVK 63

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTR 102
           ++ V   K               +  +    +     E    I  +R
Sbjct: 64  VTKVVEDKSAPRMIYDPKHPLANDKGYVSMPNVNVTEEMVNMISASR 110


>gi|117621411|ref|YP_857345.1| flagellar basal body rod protein FlgC [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117562818|gb|ABK39766.1| flagellar basal-body rod protein FlgC [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 139

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 22/43 (51%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           GF+   N N + EM  MI+ ++ + +   + D  +K + + + 
Sbjct: 93  GFIFKPNVNMVEEMADMINASRSYQTNVQVADSAKKMLQQTLN 135



 Score = 36.0 bits (81), Expect = 4.6,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 6/55 (10%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKND 51
            F+I  +A  A   RL+TVA NM+N D+V       +   +  F+  +    +D
Sbjct: 5  KVFDIAGSAMSAQSVRLNTVASNMANADSVSSSVEKTYHARRPIFAAQLDQAMSD 59


>gi|307609983|emb|CBW99512.1| flagellar hook-associated protein 1 [Legionella pneumophila 130b]
          Length = 649

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 18/132 (13%), Positives = 49/132 (37%), Gaps = 1/132 (0%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
            +  NI  +   A ++ L    +N++N  T G+    ++F+ +  + +       + V+ 
Sbjct: 1   MSILNIAYSGLNAFQRALDVTGNNIANFKTRGYSRQSIQFTPI-ASNRYAGSYIGAGVSV 59

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
              Y + +  +     + L +  + DA++        +L++DG        +   + G+ 
Sbjct: 60  SSIYRNVDQFANAQVRSTLSYRTQYDAFYNQAIQIDKLLSQDGSSISVPLQTFFDSIGQL 119

Query: 122 PVLDMASVPIQI 133
                      +
Sbjct: 120 NSTPDNIATRGV 131


>gi|26991079|ref|NP_746504.1| flagellar basal body rod protein FlgC [Pseudomonas putida KT2440]
 gi|24986114|gb|AAN69968.1|AE016635_4 flagellar basal-body rod protein FlgC [Pseudomonas putida KT2440]
 gi|313497759|gb|ADR59125.1| FlgC [Pseudomonas putida BIRD-1]
          Length = 147

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N + EM  MI  ++ F +   L++  +  M + + 
Sbjct: 102 GYVYYPNVNVVEEMADMISASRAFQTNAELMNTAKNMMQKVLT 144



 Score = 41.4 bits (95), Expect = 0.12,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 6/56 (10%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQ 54
          FNI  +   A   RL+TVA N++N +TV       +R     F+      +    Q
Sbjct: 7  FNIAGSGMSAQNTRLNTVASNIANAETVSSSIDQTYRARHPVFATTFQNAQAGSSQ 62


>gi|15801191|ref|NP_287208.1| flagellar basal body rod protein FlgC [Escherichia coli O157:H7
           EDL933]
 gi|15830706|ref|NP_309479.1| flagellar basal body rod protein FlgC [Escherichia coli O157:H7
           str. Sakai]
 gi|16129037|ref|NP_415592.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli str. K-12 substr. MG1655]
 gi|26247214|ref|NP_753254.1| flagellar basal body rod protein FlgC [Escherichia coli CFT073]
 gi|74311636|ref|YP_310055.1| flagellar basal body rod protein FlgC [Shigella sonnei Ss046]
 gi|82544460|ref|YP_408407.1| flagellar basal body rod protein FlgC [Shigella boydii Sb227]
 gi|89107920|ref|AP_001700.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli str. K-12 substr. W3110]
 gi|91210226|ref|YP_540212.1| flagellar basal body rod protein FlgC [Escherichia coli UTI89]
 gi|110641250|ref|YP_668980.1| flagellar basal body rod protein FlgC [Escherichia coli 536]
 gi|117623260|ref|YP_852173.1| flagellar basal body rod protein FlgC [Escherichia coli APEC O1]
 gi|157158527|ref|YP_001462308.1| flagellar basal body rod protein FlgC [Escherichia coli E24377A]
 gi|157160601|ref|YP_001457919.1| flagellar basal body rod protein FlgC [Escherichia coli HS]
 gi|168747150|ref|ZP_02772172.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4113]
 gi|168758634|ref|ZP_02783641.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4401]
 gi|168764486|ref|ZP_02789493.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4501]
 gi|168767733|ref|ZP_02792740.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4486]
 gi|168773919|ref|ZP_02798926.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4196]
 gi|168783604|ref|ZP_02808611.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4076]
 gi|168790009|ref|ZP_02815016.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC869]
 gi|168802019|ref|ZP_02827026.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC508]
 gi|170020530|ref|YP_001725484.1| flagellar basal body rod protein FlgC [Escherichia coli ATCC 8739]
 gi|170080725|ref|YP_001730045.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli str. K-12 substr. DH10B]
 gi|187733039|ref|YP_001880754.1| flagellar basal body rod protein FlgC [Shigella boydii CDC 3083-94]
 gi|188493209|ref|ZP_03000479.1| flagellar basal-body rod protein FlgC [Escherichia coli 53638]
 gi|191168455|ref|ZP_03030243.1| flagellar basal-body rod protein FlgC [Escherichia coli B7A]
 gi|191172415|ref|ZP_03033956.1| flagellar basal-body rod protein FlgC [Escherichia coli F11]
 gi|193064524|ref|ZP_03045604.1| flagellar basal-body rod protein FlgC [Escherichia coli E22]
 gi|194428485|ref|ZP_03061025.1| flagellar basal-body rod protein FlgC [Escherichia coli B171]
 gi|194437997|ref|ZP_03070090.1| flagellar basal-body rod protein FlgC [Escherichia coli 101-1]
 gi|195935464|ref|ZP_03080846.1| flagellar basal body rod protein FlgC [Escherichia coli O157:H7
           str. EC4024]
 gi|208806183|ref|ZP_03248520.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4206]
 gi|208816163|ref|ZP_03257342.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4045]
 gi|208822529|ref|ZP_03262848.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4042]
 gi|209400948|ref|YP_002269920.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4115]
 gi|209918328|ref|YP_002292412.1| flagellar basal body rod protein FlgC [Escherichia coli SE11]
 gi|215486283|ref|YP_002328714.1| flagellar basal body rod protein FlgC [Escherichia coli O127:H6
           str. E2348/69]
 gi|217328457|ref|ZP_03444539.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. TW14588]
 gi|218553653|ref|YP_002386566.1| flagellar basal body rod protein FlgC [Escherichia coli IAI1]
 gi|218557956|ref|YP_002390869.1| flagellar basal body rod protein FlgC [Escherichia coli S88]
 gi|218689027|ref|YP_002397239.1| flagellar basal body rod protein FlgC [Escherichia coli ED1a]
 gi|218694608|ref|YP_002402275.1| flagellar basal body rod protein FlgC [Escherichia coli 55989]
 gi|218700423|ref|YP_002408052.1| flagellar basal body rod protein FlgC [Escherichia coli IAI39]
 gi|218704482|ref|YP_002412001.1| flagellar basal body rod protein FlgC [Escherichia coli UMN026]
 gi|227886568|ref|ZP_04004373.1| flagellar basal body rod protein FlgC [Escherichia coli 83972]
 gi|237706940|ref|ZP_04537421.1| flagellar rod protein FlgC [Escherichia sp. 3_2_53FAA]
 gi|238900328|ref|YP_002926124.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli BW2952]
 gi|253773902|ref|YP_003036733.1| flagellar basal body rod protein FlgC [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254161180|ref|YP_003044288.1| flagellar basal body rod protein FlgC [Escherichia coli B str.
           REL606]
 gi|254792456|ref|YP_003077293.1| flagellar basal body rod protein FlgC [Escherichia coli O157:H7
           str. TW14359]
 gi|256018669|ref|ZP_05432534.1| flagellar basal body rod protein FlgC [Shigella sp. D9]
 gi|256023228|ref|ZP_05437093.1| flagellar basal body rod protein FlgC [Escherichia sp. 4_1_40B]
 gi|260843314|ref|YP_003221092.1| flagellar component FlgC of cell-proximal portion of basal-body rod
           [Escherichia coli O103:H2 str. 12009]
 gi|260854557|ref|YP_003228448.1| flagellar component FlgC of cell-proximal portion of basal-body rod
           [Escherichia coli O26:H11 str. 11368]
 gi|260867437|ref|YP_003233839.1| flagellar component FlgC of cell-proximal portion of basal-body rod
           [Escherichia coli O111:H- str. 11128]
 gi|261227021|ref|ZP_05941302.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli O157:H7 str. FRIK2000]
 gi|261256255|ref|ZP_05948788.1| flagellar component FlgC of cell-proximal portion of basal-body rod
           [Escherichia coli O157:H7 str. FRIK966]
 gi|291282094|ref|YP_003498912.1| Cell-proximal portion of basal-body rod [Escherichia coli O55:H7
           str. CB9615]
 gi|293404358|ref|ZP_06648352.1| flgC [Escherichia coli FVEC1412]
 gi|293414369|ref|ZP_06657018.1| flagellar basal-body rod protein FlgC [Escherichia coli B185]
 gi|293433364|ref|ZP_06661792.1| flagellar basal-body rod protein FlgC [Escherichia coli B088]
 gi|298380138|ref|ZP_06989743.1| flagellar basal-body rod protein FlgC [Escherichia coli FVEC1302]
 gi|300816776|ref|ZP_07096996.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 107-1]
 gi|300821145|ref|ZP_07101294.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 119-7]
 gi|300899593|ref|ZP_07117832.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 198-1]
 gi|300902465|ref|ZP_07120447.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 84-1]
 gi|300918676|ref|ZP_07135257.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 115-1]
 gi|300922600|ref|ZP_07138700.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 182-1]
 gi|300928374|ref|ZP_07143908.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 187-1]
 gi|300938639|ref|ZP_07153368.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 21-1]
 gi|300950169|ref|ZP_07164114.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 116-1]
 gi|300954386|ref|ZP_07166840.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 175-1]
 gi|300974378|ref|ZP_07172590.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 45-1]
 gi|300982623|ref|ZP_07176207.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 200-1]
 gi|301023261|ref|ZP_07187058.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 69-1]
 gi|301029711|ref|ZP_07192765.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 196-1]
 gi|301051142|ref|ZP_07197972.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 185-1]
 gi|301304987|ref|ZP_07211089.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 124-1]
 gi|301328556|ref|ZP_07221617.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 78-1]
 gi|301644986|ref|ZP_07244952.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 146-1]
 gi|306814077|ref|ZP_07448250.1| flagellar basal body rod protein FlgC [Escherichia coli NC101]
 gi|307137709|ref|ZP_07497065.1| flagellar basal body rod protein FlgC [Escherichia coli H736]
 gi|309798068|ref|ZP_07692443.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 145-7]
 gi|312968852|ref|ZP_07783059.1| flagellar basal-body rod protein FlgC [Escherichia coli 2362-75]
 gi|312971211|ref|ZP_07785389.1| flagellar basal-body rod protein FlgC [Escherichia coli 1827-70]
 gi|331641618|ref|ZP_08342753.1| flagellar basal-body rod protein FlgC [Escherichia coli H736]
 gi|331646332|ref|ZP_08347435.1| flagellar basal-body rod protein FlgC [Escherichia coli M605]
 gi|331652127|ref|ZP_08353146.1| flagellar basal-body rod protein FlgC [Escherichia coli M718]
 gi|331657136|ref|ZP_08358098.1| flagellar basal-body rod protein FlgC [Escherichia coli TA206]
 gi|331662480|ref|ZP_08363403.1| flagellar basal-body rod protein FlgC [Escherichia coli TA143]
 gi|331667474|ref|ZP_08368338.1| flagellar basal-body rod protein FlgC [Escherichia coli TA271]
 gi|331672594|ref|ZP_08373383.1| flagellar basal-body rod protein FlgC [Escherichia coli TA280]
 gi|331676865|ref|ZP_08377561.1| flagellar basal-body rod protein FlgC [Escherichia coli H591]
 gi|331682576|ref|ZP_08383195.1| flagellar basal-body rod protein FlgC [Escherichia coli H299]
 gi|332279738|ref|ZP_08392151.1| flagellar rod protein FlgC [Shigella sp. D9]
 gi|78100011|sp|P0ABX4|FLGC_ECO57 RecName: Full=Flagellar basal-body rod protein flgC; AltName:
           Full=Putative proximal rod protein
 gi|78100012|sp|P0ABX3|FLGC_ECOL6 RecName: Full=Flagellar basal-body rod protein flgC; AltName:
           Full=Putative proximal rod protein
 gi|78100013|sp|P0ABX2|FLGC_ECOLI RecName: Full=Flagellar basal-body rod protein flgC; AltName:
           Full=Putative proximal rod protein
 gi|12514612|gb|AAG55820.1|AE005317_9 flagellar biosynthesis, cell-proximal portion of basal-body rod
           [Escherichia coli O157:H7 str. EDL933]
 gi|26107615|gb|AAN79814.1|AE016759_88 Flagellar basal-body rod protein flgC [Escherichia coli CFT073]
 gi|1787314|gb|AAC74158.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli str. K-12 substr. MG1655]
 gi|4062651|dbj|BAA35882.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli str. K12 substr. W3110]
 gi|13360916|dbj|BAB34875.1| flagellar rod protein FlgC [Escherichia coli O157:H7 str. Sakai]
 gi|73855113|gb|AAZ87820.1| flagellar protein for cell-proximal portion of basal-body rod
           [Shigella sonnei Ss046]
 gi|81245871|gb|ABB66579.1| cell-proximal portion of basal-body rod [Shigella boydii Sb227]
 gi|91071800|gb|ABE06681.1| flagellar biosynthesis, cell-proximal portion of basal-body rod
           [Escherichia coli UTI89]
 gi|110342842|gb|ABG69079.1| flagellar basal-body rod protein FlgC [Escherichia coli 536]
 gi|115512384|gb|ABJ00459.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli APEC O1]
 gi|157066281|gb|ABV05536.1| flagellar basal-body rod protein FlgC [Escherichia coli HS]
 gi|157080557|gb|ABV20265.1| flagellar basal-body rod protein FlgC [Escherichia coli E24377A]
 gi|169755458|gb|ACA78157.1| flagellar basal-body rod protein FlgC [Escherichia coli ATCC 8739]
 gi|169888560|gb|ACB02267.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli str. K-12 substr. DH10B]
 gi|187430031|gb|ACD09305.1| flagellar basal-body rod protein FlgC [Shigella boydii CDC 3083-94]
 gi|187770492|gb|EDU34336.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4196]
 gi|188017999|gb|EDU56121.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4113]
 gi|188488408|gb|EDU63511.1| flagellar basal-body rod protein FlgC [Escherichia coli 53638]
 gi|188999102|gb|EDU68088.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4076]
 gi|189354569|gb|EDU72988.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4401]
 gi|189363308|gb|EDU81727.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4486]
 gi|189365512|gb|EDU83928.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4501]
 gi|189370511|gb|EDU88927.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC869]
 gi|189375937|gb|EDU94353.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC508]
 gi|190901474|gb|EDV61235.1| flagellar basal-body rod protein FlgC [Escherichia coli B7A]
 gi|190907299|gb|EDV66897.1| flagellar basal-body rod protein FlgC [Escherichia coli F11]
 gi|192927776|gb|EDV82390.1| flagellar basal-body rod protein FlgC [Escherichia coli E22]
 gi|194413537|gb|EDX29819.1| flagellar basal-body rod protein FlgC [Escherichia coli B171]
 gi|194422933|gb|EDX38927.1| flagellar basal-body rod protein FlgC [Escherichia coli 101-1]
 gi|208725984|gb|EDZ75585.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4206]
 gi|208732811|gb|EDZ81499.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4045]
 gi|208738014|gb|EDZ85697.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4042]
 gi|209162348|gb|ACI39781.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC4115]
 gi|209773398|gb|ACI85011.1| flagellar rod protein FlgC [Escherichia coli]
 gi|209773400|gb|ACI85012.1| flagellar rod protein FlgC [Escherichia coli]
 gi|209773402|gb|ACI85013.1| flagellar rod protein FlgC [Escherichia coli]
 gi|209773404|gb|ACI85014.1| flagellar rod protein FlgC [Escherichia coli]
 gi|209773406|gb|ACI85015.1| flagellar rod protein FlgC [Escherichia coli]
 gi|209911587|dbj|BAG76661.1| flagellar basal-body rod protein FlgC [Escherichia coli SE11]
 gi|215264355|emb|CAS08712.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli O127:H6 str. E2348/69]
 gi|217318884|gb|EEC27310.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. TW14588]
 gi|218351340|emb|CAU97046.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli 55989]
 gi|218360421|emb|CAQ97973.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli IAI1]
 gi|218364725|emb|CAR02415.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli S88]
 gi|218370409|emb|CAR18216.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli IAI39]
 gi|218426591|emb|CAR07419.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli ED1a]
 gi|218431579|emb|CAR12458.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli UMN026]
 gi|222032827|emb|CAP75566.1| flagellar basal-body rod protein flgC [Escherichia coli LF82]
 gi|226898150|gb|EEH84409.1| flagellar rod protein FlgC [Escherichia sp. 3_2_53FAA]
 gi|227836772|gb|EEJ47238.1| flagellar basal body rod protein FlgC [Escherichia coli 83972]
 gi|238861102|gb|ACR63100.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli BW2952]
 gi|242376878|emb|CAQ31595.1| flagellar basal-body rod protein FlgC, subunit of Flagellar Motor
           Complex and Flagellum [Escherichia coli BL21(DE3)]
 gi|253324946|gb|ACT29548.1| flagellar basal-body rod protein FlgC [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253973081|gb|ACT38752.1| flagellar basal-body rod protein C [Escherichia coli B str. REL606]
 gi|253977295|gb|ACT42965.1| flagellar basal-body rod protein C [Escherichia coli BL21(DE3)]
 gi|254591856|gb|ACT71217.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia coli O157:H7 str. TW14359]
 gi|257753206|dbj|BAI24708.1| flagellar component FlgC of cell-proximal portion of basal-body rod
           [Escherichia coli O26:H11 str. 11368]
 gi|257758461|dbj|BAI29958.1| flagellar component FlgC of cell-proximal portion of basal-body rod
           [Escherichia coli O103:H2 str. 12009]
 gi|257763793|dbj|BAI35288.1| flagellar component FlgC of cell-proximal portion of basal-body rod
           [Escherichia coli O111:H- str. 11128]
 gi|260449786|gb|ACX40208.1| flagellar basal-body rod protein FlgC [Escherichia coli DH1]
 gi|281178183|dbj|BAI54513.1| flagellar basal-body rod protein FlgC [Escherichia coli SE15]
 gi|284920897|emb|CBG33960.1| flagellar basal-body rod protein FlgC [Escherichia coli 042]
 gi|290761967|gb|ADD55928.1| Cell-proximal portion of basal-body rod [Escherichia coli O55:H7
           str. CB9615]
 gi|291324183|gb|EFE63605.1| flagellar basal-body rod protein FlgC [Escherichia coli B088]
 gi|291428944|gb|EFF01969.1| flgC [Escherichia coli FVEC1412]
 gi|291434427|gb|EFF07400.1| flagellar basal-body rod protein FlgC [Escherichia coli B185]
 gi|294493232|gb|ADE91988.1| flagellar basal-body rod protein FlgC [Escherichia coli IHE3034]
 gi|298279836|gb|EFI21344.1| flagellar basal-body rod protein FlgC [Escherichia coli FVEC1302]
 gi|299877399|gb|EFI85610.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 196-1]
 gi|300297163|gb|EFJ53548.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 185-1]
 gi|300307088|gb|EFJ61608.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 200-1]
 gi|300318622|gb|EFJ68406.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 175-1]
 gi|300356864|gb|EFJ72734.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 198-1]
 gi|300397106|gb|EFJ80644.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 69-1]
 gi|300405497|gb|EFJ89035.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 84-1]
 gi|300410621|gb|EFJ94159.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 45-1]
 gi|300414170|gb|EFJ97480.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 115-1]
 gi|300421077|gb|EFK04388.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 182-1]
 gi|300450516|gb|EFK14136.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 116-1]
 gi|300456424|gb|EFK19917.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 21-1]
 gi|300463632|gb|EFK27125.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 187-1]
 gi|300526444|gb|EFK47513.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 119-7]
 gi|300530550|gb|EFK51612.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 107-1]
 gi|300839705|gb|EFK67465.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 124-1]
 gi|300844948|gb|EFK72708.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 78-1]
 gi|301076715|gb|EFK91521.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 146-1]
 gi|305852714|gb|EFM53162.1| flagellar basal body rod protein FlgC [Escherichia coli NC101]
 gi|307553076|gb|ADN45851.1| flagellar basal-body rod protein FlgC [Escherichia coli ABU 83972]
 gi|307627456|gb|ADN71760.1| flagellar basal body rod protein FlgC [Escherichia coli UM146]
 gi|308118351|gb|EFO55613.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 145-7]
 gi|309701346|emb|CBJ00647.1| flagellar basal-body rod protein FlgC [Escherichia coli ETEC
           H10407]
 gi|310336413|gb|EFQ01599.1| flagellar basal-body rod protein FlgC [Escherichia coli 1827-70]
 gi|312286254|gb|EFR14167.1| flagellar basal-body rod protein FlgC [Escherichia coli 2362-75]
 gi|312945636|gb|ADR26463.1| flagellar basal body rod protein FlgC [Escherichia coli O83:H1 str.
           NRG 857C]
 gi|315135706|dbj|BAJ42865.1| cell-proximal portion of basal-body rod [Escherichia coli DH1]
 gi|315253875|gb|EFU33843.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 85-1]
 gi|315287371|gb|EFU46782.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 110-3]
 gi|315291068|gb|EFU50431.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 153-1]
 gi|315296705|gb|EFU56000.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 16-3]
 gi|315618244|gb|EFU98834.1| flagellar basal-body rod protein FlgC [Escherichia coli 3431]
 gi|320179226|gb|EFW54184.1| Flagellar basal-body rod protein FlgC [Shigella boydii ATCC 9905]
 gi|320186979|gb|EFW61692.1| Flagellar basal-body rod protein FlgC [Shigella flexneri CDC
           796-83]
 gi|320189757|gb|EFW64413.1| Flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. EC1212]
 gi|320196444|gb|EFW71067.1| Flagellar basal-body rod protein FlgC [Escherichia coli WV_060327]
 gi|320637525|gb|EFX07325.1| flagellar basal body rod protein FlgC [Escherichia coli O157:H7
           str. G5101]
 gi|320643086|gb|EFX12287.1| flagellar basal body rod protein FlgC [Escherichia coli O157:H-
           str. 493-89]
 gi|320648544|gb|EFX17199.1| flagellar basal body rod protein FlgC [Escherichia coli O157:H-
           str. H 2687]
 gi|320653858|gb|EFX21932.1| flagellar basal body rod protein FlgC [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320659338|gb|EFX26907.1| flagellar basal body rod protein FlgC [Escherichia coli O55:H7 str.
           USDA 5905]
 gi|320664473|gb|EFX31624.1| flagellar basal body rod protein FlgC [Escherichia coli O157:H7
           str. LSU-61]
 gi|323156881|gb|EFZ43015.1| flagellar basal-body rod protein FlgC [Escherichia coli EPECa14]
 gi|323163756|gb|EFZ49575.1| flagellar basal-body rod protein FlgC [Escherichia coli E128010]
 gi|323174797|gb|EFZ60412.1| flagellar basal-body rod protein FlgC [Escherichia coli LT-68]
 gi|323175695|gb|EFZ61289.1| flagellar basal-body rod protein FlgC [Escherichia coli 1180]
 gi|323185803|gb|EFZ71164.1| flagellar basal-body rod protein FlgC [Escherichia coli 1357]
 gi|323190586|gb|EFZ75858.1| flagellar basal-body rod protein FlgC [Escherichia coli RN587/1]
 gi|323937814|gb|EGB34078.1| flagellar basal-body rod protein FlgC [Escherichia coli E1520]
 gi|323942543|gb|EGB38710.1| flagellar basal-body rod protein FlgC [Escherichia coli E482]
 gi|323947624|gb|EGB43628.1| flagellar basal-body rod protein FlgC [Escherichia coli H120]
 gi|323953240|gb|EGB49106.1| flagellar basal-body rod protein FlgC [Escherichia coli H252]
 gi|323957898|gb|EGB53610.1| flagellar basal-body rod protein FlgC [Escherichia coli H263]
 gi|323962673|gb|EGB58251.1| flagellar basal-body rod protein FlgC [Escherichia coli H489]
 gi|323967015|gb|EGB62441.1| flagellar basal-body rod protein FlgC [Escherichia coli M863]
 gi|323973337|gb|EGB68526.1| flagellar basal-body rod protein FlgC [Escherichia coli TA007]
 gi|323976553|gb|EGB71641.1| flagellar basal-body rod protein FlgC [Escherichia coli TW10509]
 gi|324007914|gb|EGB77133.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 57-2]
 gi|324013348|gb|EGB82567.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 60-1]
 gi|324017422|gb|EGB86641.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 117-3]
 gi|324117355|gb|EGC11262.1| flagellar basal-body rod protein FlgC [Escherichia coli E1167]
 gi|326339296|gb|EGD63110.1| Flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. 1125]
 gi|326344743|gb|EGD68491.1| Flagellar basal-body rod protein FlgC [Escherichia coli O157:H7
           str. 1044]
 gi|327253473|gb|EGE65111.1| flagellar basal-body rod protein FlgC [Escherichia coli STEC_7v]
 gi|330910888|gb|EGH39398.1| flagellar basal-body rod protein FlgC [Escherichia coli AA86]
 gi|331038416|gb|EGI10636.1| flagellar basal-body rod protein FlgC [Escherichia coli H736]
 gi|331045084|gb|EGI17211.1| flagellar basal-body rod protein FlgC [Escherichia coli M605]
 gi|331050405|gb|EGI22463.1| flagellar basal-body rod protein FlgC [Escherichia coli M718]
 gi|331055384|gb|EGI27393.1| flagellar basal-body rod protein FlgC [Escherichia coli TA206]
 gi|331060902|gb|EGI32866.1| flagellar basal-body rod protein FlgC [Escherichia coli TA143]
 gi|331065059|gb|EGI36954.1| flagellar basal-body rod protein FlgC [Escherichia coli TA271]
 gi|331070237|gb|EGI41603.1| flagellar basal-body rod protein FlgC [Escherichia coli TA280]
 gi|331075554|gb|EGI46852.1| flagellar basal-body rod protein FlgC [Escherichia coli H591]
 gi|331080207|gb|EGI51386.1| flagellar basal-body rod protein FlgC [Escherichia coli H299]
 gi|332094031|gb|EGI99083.1| flagellar basal-body rod protein FlgC [Shigella boydii 3594-74]
 gi|332102090|gb|EGJ05436.1| flagellar rod protein FlgC [Shigella sp. D9]
 gi|332342620|gb|AEE55954.1| flagellar basal-body rod protein FlgC [Escherichia coli UMNK88]
          Length = 134

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 6/43 (13%), Positives = 22/43 (51%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G+++  N + + EM   +  ++ + +   +++  +  ML+ + 
Sbjct: 89  GYVKMPNVDVVGEMVNTMSASRSYQANVEVLNTVKSMMLKTLT 131



 Score = 39.1 bits (89), Expect = 0.56,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 6/47 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42
             F+I  +A  A  QRL+  A N++N     G     +R  +V F 
Sbjct: 4  LNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRAKQVVFQ 50


>gi|330811237|ref|YP_004355699.1| flagellar basal-body rod protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327379345|gb|AEA70695.1| Putative flagellar basal-body rod protein [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 147

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 30/72 (41%), Gaps = 6/72 (8%)

Query: 168 GFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
           G V  +++  +   P  P  D        G++   N N + EM  MI  ++ F +   ++
Sbjct: 79  GVVEDQSNLEARYEPNHPAADAK------GYVYYPNVNVVEEMADMISASRSFQTNAEMM 132

Query: 228 DENEKSMLEAIR 239
           +  +  M + + 
Sbjct: 133 NTAKTMMQKVLT 144



 Score = 40.6 bits (93), Expect = 0.18,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 6/56 (10%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQ 54
          FNI  +A  A   RL+TVA N++N +TV       +R     F+ +    ++    
Sbjct: 7  FNIAGSAMSAQTTRLNTVASNIANAETVSSSIDQTYRARHPVFATMFQGGQSGGSD 62


>gi|266621920|ref|ZP_06114855.1| flagellar basal-body rod protein FlgC [Clostridium hathewayi DSM
           13479]
 gi|288866393|gb|EFC98691.1| flagellar basal-body rod protein FlgC [Clostridium hathewayi DSM
           13479]
          Length = 144

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 23/46 (50%), Gaps = 1/46 (2%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G++   N NS  EM  ++  T+ + +  T ++  +   L+A+  I 
Sbjct: 99  GYVMMPNVNSAEEMVDLMAATRAYEANVTALNIAKSMALKAL-EIG 143


>gi|256371026|ref|YP_003108850.1| flagellar hook-associated protein FlgK [Acidimicrobium
          ferrooxidans DSM 10331]
 gi|256007610|gb|ACU53177.1| flagellar hook-associated protein FlgK [Acidimicrobium
          ferrooxidans DSM 10331]
          Length = 462

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 20/37 (54%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
          +  I L+   A +  L  VA N++N +T G+++  V 
Sbjct: 5  ALYIALSGLEAQQVGLDVVAQNVANANTPGYQSESVD 41


>gi|304558598|gb|ADM41262.1| Flagellar hook-associated protein FlgK [Edwardsiella tarda FL6-60]
          Length = 546

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 18/167 (10%), Positives = 45/167 (26%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M    N  ++   A +  L+  ++N++N  T G+    V F+E  G            V 
Sbjct: 1   MANLINNAMSGLSAAQTALAVTSNNINNVYTAGYNRQSVSFAENNGTSTPAGFIGNGVVV 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           SG      +         + +FA        +     ++                +    
Sbjct: 61  SGINREYNQFIVNQLRQGQSEFATTSTYHKQISQIDDLLADSTNSLSANMQNFFKNLQNL 120

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
                 ++    +           K   +    + ++      + ++
Sbjct: 121 VSYPSDSAARQTVISNANGLTAQFKTTDAYLRNLESSTNATVSNNAE 167


>gi|260437431|ref|ZP_05791247.1| flagellar hook-associated protein FlgK [Butyrivibrio crossotus
          DSM 2876]
 gi|292810063|gb|EFF69268.1| flagellar hook-associated protein FlgK [Butyrivibrio crossotus
          DSM 2876]
          Length = 579

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 20/40 (50%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
             +GL+        L+T A+N++N +T G+   +V   +
Sbjct: 5  GLYVGLSGLQTSSNSLNTTANNLANVNTSGYVRQQVVNGD 44



 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 8/35 (22%), Positives = 16/35 (45%)

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            E+  MI   Q +N+ +  I+  +  +   I N+ 
Sbjct: 543 EELSNMIKFQQAYNASSRFINVIDDMIQTLINNLG 577


>gi|157376218|ref|YP_001474818.1| flagellar basal body rod protein FlgC [Shewanella sediminis
           HAW-EB3]
 gi|157318592|gb|ABV37690.1| flagellar basal-body rod protein FlgC [Shewanella sediminis
           HAW-EB3]
          Length = 138

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 20/43 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           GF+   N N M EM  MI  ++ +     + +  +  + + +R
Sbjct: 93  GFIYKPNVNVMEEMANMISASRSYQMNVQVAEAAKSMLQQTLR 135



 Score = 37.2 bits (84), Expect = 2.0,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 26/82 (31%), Gaps = 6/82 (7%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKISF 58
          FN+  +   A   RL+T A N++N D V       +R     F   +    +      + 
Sbjct: 7  FNVAGSGMSAQSVRLNTTASNIANADAVSSSVDETYRARHPIFEAEMAKASHQQQSSQAV 66

Query: 59 VASGKEYLSKEVGSFISTGTEL 80
             G       +    S    +
Sbjct: 67 AVKGIVESDAPLQKEYSPDHPM 88


>gi|90021858|ref|YP_527685.1| GTP-binding protein LepA [Saccharophagus degradans 2-40]
 gi|89951458|gb|ABD81473.1| flagellar basal-body rod protein FlgB [Saccharophagus degradans
          2-40]
          Length = 134

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 9/51 (17%), Positives = 22/51 (43%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
            +  I  +A     +R   +A+N++N +T G++   + F + +       
Sbjct: 6  DKALGIYESALSLRSERAGVLANNLANVNTPGYKARDIDFQQALKDSMGQG 56


>gi|301168512|emb|CBW28102.1| putative flagellar hook-associated protein 1 [Bacteriovorax
          marinus SJ]
          Length = 487

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 21/98 (21%), Positives = 35/98 (35%), Gaps = 5/98 (5%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M    NIG     A ++ L T   N+SN +T G+   +V            I +  +   
Sbjct: 1  MSDLLNIGRTGLNASKKSLETTGHNISNVNTEGYSRQRVN-----QTTNTPITKGGTVHG 55

Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98
          +G    S    +       L+ A+  D +F   + R  
Sbjct: 56 TGVRVKSVTRINDDFINKRLEKAISNDRFFEQRAERMT 93



 Score = 40.2 bits (92), Expect = 0.28,   Method: Composition-based stats.
 Identities = 3/35 (8%), Positives = 11/35 (31%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            +   E   M+     + +   ++   ++     I
Sbjct: 449 VSIDEEAANMVKFQHAYEASAKIMQTADEMFKTVI 483


>gi|323498422|ref|ZP_08103418.1| flagellar basal body rod protein FlgC [Vibrio sinaloensis DSM
           21326]
 gi|323316495|gb|EGA69510.1| flagellar basal body rod protein FlgC [Vibrio sinaloensis DSM
           21326]
          Length = 138

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 23/43 (53%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N M EM  MI  ++ + +   + D +++ +L  ++
Sbjct: 93  GYIYKPNVNVMEEMANMISASRSYQTNVQVADASKQMLLRTLQ 135


>gi|119469948|ref|ZP_01612753.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Alteromonadales bacterium TW-7]
 gi|119446658|gb|EAW27931.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Alteromonadales bacterium TW-7]
          Length = 143

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 21/42 (50%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N N + EM  MI  ++ + +   + D  ++ + + +
Sbjct: 97  GYIYKPNVNVVEEMANMISASRSYETNVQVADAAKQMLSKTL 138



 Score = 39.1 bits (89), Expect = 0.59,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 24/59 (40%), Gaps = 6/59 (10%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQK 55
            F+I  +   A   RL+T A N+SN +T+       +R  +  F+  +      +   
Sbjct: 5  NVFDIAGSGMSAQNVRLNTTASNISNANTISSSQDKTYRARQPVFAAELTKASESVSNN 63


>gi|89100618|ref|ZP_01173476.1| flagellar hook-associated protein K [Bacillus sp. NRRL B-14911]
 gi|89084642|gb|EAR63785.1| flagellar hook-associated protein K [Bacillus sp. NRRL B-14911]
          Length = 527

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 14/107 (13%), Positives = 30/107 (28%), Gaps = 1/107 (0%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
                       +  L     N++N +T GF   ++ F +        +++       G 
Sbjct: 2   GLETARRGMFTQQSALYVTGHNIANANTPGFSRQRINFEQTSPYPAASMNRPQVPGQMGT 61

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTD 110
              +  V        +L + +E +      S     LT+        
Sbjct: 62  GVEAGSVQRIREGFLDLQYRVEANK-VGYYSSMSESLTKMEEIMNEP 107



 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 16/41 (39%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  +   EM  MI     +N+    I   ++ + + I  + 
Sbjct: 483 SAVSLDEEMTNMIKFQHAYNAAARNITVVDEMLDKIINGMG 523


>gi|46202499|ref|ZP_00053126.2| COG1749: Flagellar hook protein FlgE [Magnetospirillum
           magnetotacticum MS-1]
          Length = 354

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 22/137 (16%), Positives = 37/137 (27%)

Query: 100 LTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG 159
           LT+      T           Y    M  V I    K        K     +  V   + 
Sbjct: 212 LTQFSGDTSTKMSVKNIDQDGYASGTMDQVEIDTAGKVVAHFDNGKSRTIFQIPVATFVS 271

Query: 160 LYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              +D   G V R                 SG ++    LE SN     +  +MI   + 
Sbjct: 272 ADQLDPISGTVFRATEQAGDITIAAISAQGSGASIVASSLEASNVALEDQFSKMIVTQKA 331

Query: 220 FNSITTLIDENEKSMLE 236
           +++   +    ++    
Sbjct: 332 YSTNANVFKTADEMTQT 348


>gi|254508426|ref|ZP_05120546.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus 16]
 gi|219548636|gb|EED25641.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus 16]
          Length = 138

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 23/43 (53%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N M EM  MI  ++ + +   + D +++ +L  ++
Sbjct: 93  GYIYKPNVNVMEEMANMISASRSYQTNVQVADASKQMLLRTLQ 135



 Score = 35.2 bits (79), Expect = 8.9,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 31/84 (36%), Gaps = 6/84 (7%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56
            FN+  +A  A   RL+T + N++N D+V       ++     F   +   K   D  +
Sbjct: 5  NVFNVTGSAMSAESVRLNTTSSNLANADSVSSSAKDTYKARHAVFGAELSKAKYGNDHTV 64

Query: 57 SFVASGKEYLSKEVGSFISTGTEL 80
               G     K + +  +    L
Sbjct: 65 PVKVMGIVESDKPLSAEYNPDHPL 88


>gi|149188064|ref|ZP_01866359.1| flagellar basal-body rod protein C [Vibrio shilonii AK1]
 gi|148838052|gb|EDL54994.1| flagellar basal-body rod protein C [Vibrio shilonii AK1]
          Length = 138

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 23/43 (53%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N M EM  MI  ++ + +   + D +++ +L  +R
Sbjct: 93  GYIYKPNVNVMEEMANMISASRSYQTNVQVADASKQMLLSTLR 135


>gi|20807892|ref|NP_623063.1| flagellar basal body protein [Thermoanaerobacter tengcongensis
          MB4]
 gi|20516457|gb|AAM24667.1| Flagellar basal body protein [Thermoanaerobacter tengcongensis
          MB4]
          Length = 131

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 22/41 (53%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51
             A   R + +A+N++N DT  F+  +VKF E++    N 
Sbjct: 11 GLYAATVRSNVIANNIANVDTPNFKRSEVKFEEILQEALNG 51


>gi|54297188|ref|YP_123557.1| flagellar hook-associated protein FlgK [Legionella pneumophila str.
           Paris]
 gi|53750973|emb|CAH12384.1| flagellar hook-associated protein 1 [Legionella pneumophila str.
           Paris]
          Length = 649

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 18/132 (13%), Positives = 49/132 (37%), Gaps = 1/132 (0%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
            +  NI  +   A ++ L    +N++N  T G+    ++F+ +  + +       + V+ 
Sbjct: 1   MSILNIAYSGLNAFQRALDVTGNNIANFKTRGYSRQSIQFTPI-ASNRYAGSYIGAGVSV 59

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
              Y + +  +     + L +  + DA++        +L++DG        +   + G+ 
Sbjct: 60  SSIYRNVDQFANAQVRSTLSYRTQYDAFYNQAIQIDKLLSQDGSSISVPLQTFFDSIGQL 119

Query: 122 PVLDMASVPIQI 133
                      +
Sbjct: 120 NSTPDNIATRGV 131


>gi|229592132|ref|YP_002874251.1| flagellar basal body rod protein FlgC [Pseudomonas fluorescens
           SBW25]
 gi|229363998|emb|CAY51548.1| putative flagellar basal-body rod protein [Pseudomonas fluorescens
           SBW25]
          Length = 147

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 30/72 (41%), Gaps = 6/72 (8%)

Query: 168 GFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
           G V  +++  +   P  P  +        G++   N N + EM  MI  ++ F +   ++
Sbjct: 79  GVVEDQSNLEARYEPNHPAANEK------GYVYYPNVNVVEEMADMISASRSFQTNAEMM 132

Query: 228 DENEKSMLEAIR 239
           +  +  M + + 
Sbjct: 133 NTAKTMMQKVLT 144



 Score = 41.8 bits (96), Expect = 0.075,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 6/56 (10%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQ 54
          FNI  +   A   RL+TVA N++N +TV       +R     F+ +    ++    
Sbjct: 7  FNIAGSGMSAQTTRLNTVASNIANAETVSSSIDQTYRARHPVFATMFQGGQSGGSD 62


>gi|311694367|gb|ADP97240.1| flagellar hook-associated protein FlgK [marine bacterium HP15]
          Length = 676

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 30/88 (34%), Gaps = 3/88 (3%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M     IGL   L+ +  L+T  +N++N +T G+   +V F                   
Sbjct: 1  MAGLIGIGLTGILSHQAALNTTGNNITNANTPGYSRQEVLFET---QEGQRTGAGTIGSG 57

Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDA 88
               + +    ++      D  L G+ 
Sbjct: 58 VNVADIRRLANEYLVQQVREDSTLYGEQ 85


>gi|240145509|ref|ZP_04744110.1| flagellar basal-body rod protein FlgC [Roseburia intestinalis
           L1-82]
 gi|257202324|gb|EEV00609.1| flagellar basal-body rod protein FlgC [Roseburia intestinalis
           L1-82]
 gi|291536000|emb|CBL09112.1| flagellar basal-body rod protein FlgC [Roseburia intestinalis
           M50/1]
 gi|291538494|emb|CBL11605.1| flagellar basal-body rod protein FlgC [Roseburia intestinalis
           XB6B4]
          Length = 146

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 22/43 (51%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N++ EM  +I  T+ + + TT  D  +  +  A+ 
Sbjct: 101 GYVTYPNVNTVTEMTNLIDATRAYEANTTAFDATKSMVQAALN 143



 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 6/47 (12%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43
           +F+I  +   A   R+ T+A N++N +T     G  +R   V F+E
Sbjct: 5  QAFDISASGMTAERFRMDTIAQNIANINTTRTEDGTPYRRKIVTFAE 51


>gi|117928040|ref|YP_872591.1| flagellar hook-associated protein FlgK [Acidothermus
          cellulolyticus 11B]
 gi|117648503|gb|ABK52605.1| flagellar hook-associated protein FlgK [Acidothermus
          cellulolyticus 11B]
          Length = 463

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 24/58 (41%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
          S +  L A  A  + L     N++N  T G+   +  F  + G++   +  +   V +
Sbjct: 7  SLSTALTALQAERKALEVTGQNIANASTSGYTRQRAVFQGIGGSVVPAMYSRSDGVGA 64



 Score = 38.7 bits (88), Expect = 0.66,   Method: Composition-based stats.
 Identities = 4/39 (10%), Positives = 12/39 (30%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            S  +   E   +I     +++    +   +  +   I 
Sbjct: 421 ASGVDLDEEQTNLITFQHAYDAAAKYLSVIDSILDTLIN 459


>gi|258514000|ref|YP_003190222.1| flagellar basal-body rod protein FlgB [Desulfotomaculum
          acetoxidans DSM 771]
 gi|257777705|gb|ACV61599.1| flagellar basal-body rod protein FlgB [Desulfotomaculum
          acetoxidans DSM 771]
          Length = 134

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 20/42 (47%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          A  A   R   +A+N++N +T GF+   V F  ++    N  
Sbjct: 15 AIDAGSLRQRVIANNIANINTPGFKKSSVAFESILKKNLNTG 56


>gi|148358812|ref|YP_001250019.1| hypothetical protein LPC_0694 [Legionella pneumophila str. Corby]
 gi|296106857|ref|YP_003618557.1| flagellar hook-associated protein 1 FlgK [Legionella pneumophila
           2300/99 Alcoy]
 gi|148280585|gb|ABQ54673.1| hypothetical protein LPC_0694 [Legionella pneumophila str. Corby]
 gi|295648758|gb|ADG24605.1| flagellar hook-associated protein 1 FlgK [Legionella pneumophila
           2300/99 Alcoy]
          Length = 649

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 18/132 (13%), Positives = 49/132 (37%), Gaps = 1/132 (0%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
            +  NI  +   A ++ L    +N++N  T G+    ++F+ +  + +       + V+ 
Sbjct: 1   MSILNIAYSGLNAFQRALDVTGNNIANFKTRGYSRQSIQFTPI-ASNRYAGSYIGAGVSV 59

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
              Y + +  +     + L +  + DA++        +L++DG        +   + G+ 
Sbjct: 60  SSIYRNVDQFANAQVRSTLSYRTQYDAFYNQAIQIDKLLSQDGSSISVPLQTFFDSIGQL 119

Query: 122 PVLDMASVPIQI 133
                      +
Sbjct: 120 NSTPDNIATRGV 131


>gi|15642858|ref|NP_227899.1| flagellar hook-associated protein 1 [Thermotoga maritima MSB8]
 gi|4980572|gb|AAD35177.1|AE001695_3 flagellar hook-associated protein 1 [Thermotoga maritima MSB8]
          Length = 858

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 16/43 (37%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
          M    N  L    A +  ++ V  N++N  T G+   +     
Sbjct: 6  MFGILNTALTGIHAHKLAMNIVGHNIANASTPGYSRQRPVIEA 48



 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 7/39 (17%), Positives = 15/39 (38%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            +   EM  MI     F++   +I   ++ +   I  + 
Sbjct: 820 VSLDEEMANMIEYQHAFSAAAKVITAVDQMIQTVINMVG 858


>gi|218549198|ref|YP_002382989.1| flagellar basal body rod protein FlgC [Escherichia fergusonii ATCC
           35469]
 gi|218356739|emb|CAQ89367.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia fergusonii ATCC 35469]
 gi|324113869|gb|EGC07843.1| flagellar basal-body rod protein FlgC [Escherichia fergusonii B253]
 gi|325497618|gb|EGC95477.1| flagellar basal body rod protein FlgC [Escherichia fergusonii
           ECD227]
          Length = 134

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 6/43 (13%), Positives = 22/43 (51%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G+++  N + + EM   +  ++ + +   +++  +  ML+ + 
Sbjct: 89  GYVKMPNVDVVGEMVNTMSASRSYQANVEVLNTVKSMMLKTLT 131



 Score = 38.3 bits (87), Expect = 1.0,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 6/47 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42
             F+I  +A  A  QRL+  A N++N     G     +R   V F 
Sbjct: 4  LNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRAKHVVFQ 50


>gi|1857438|gb|AAC45656.1| FlgC [Proteus mirabilis]
          Length = 134

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 6/42 (14%), Positives = 20/42 (47%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N + + EM   I  ++ + +   +++  +  M + +
Sbjct: 89  GYVRKPNVDVVGEMINTISASRSYQANVEVMNTAKSLMQKTL 130



 Score = 35.6 bits (80), Expect = 5.7,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 29/79 (36%), Gaps = 6/79 (7%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSEVVGAIKNDIDQKI 56
          + F+I  +A  A  QRL+  A NM+N    VG     +R  +V F     A +      +
Sbjct: 5  SIFDISGSALSAQSQRLNVSASNMANVDSVVGPDGEPYRAKQVVFQVNAPAGQEIGGVHV 64

Query: 57 SFVASGKEYLSKEVGSFIS 75
          + V         E      
Sbjct: 65 TQVVDDPTPFRMEYQPGNP 83


>gi|304404242|ref|ZP_07385904.1| flagellar basal-body rod protein FlgC [Paenibacillus
           curdlanolyticus YK9]
 gi|304347220|gb|EFM13052.1| flagellar basal-body rod protein FlgC [Paenibacillus
           curdlanolyticus YK9]
          Length = 149

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 20/42 (47%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N +   EM  MI  ++ + +  T ++  +    +A+
Sbjct: 104 GYVSMPNVDIAKEMIDMISASRSYEANITALNATKGMFAKAL 145



 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 7/30 (23%), Positives = 15/30 (50%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV 32
            F+   +A  A   R+  ++ N++N +T 
Sbjct: 5  NGFDANASALTAQRLRMDVISSNIANAETT 34


>gi|149182501|ref|ZP_01860974.1| flagellar basal-body rod protein C [Bacillus sp. SG-1]
 gi|148849761|gb|EDL63938.1| flagellar basal-body rod protein C [Bacillus sp. SG-1]
          Length = 153

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 26/44 (59%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           + G+++  N + + EM  +I  T+ + +  T+ + N+  M++++
Sbjct: 106 QDGYVQMPNVDPLREMIDLISATRSYEANVTVFNANKSMMMKSL 149



 Score = 45.2 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTV 32
          S N   +A  A   R+  ++ NM+N DT 
Sbjct: 6  SMNTSASALSAQRLRMDVISSNMANADTT 34


>gi|88858137|ref|ZP_01132779.1| flagellar hook-associated protein [Pseudoalteromonas tunicata D2]
 gi|88819754|gb|EAR29567.1| flagellar hook-associated protein [Pseudoalteromonas tunicata D2]
          Length = 681

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 14/105 (13%), Positives = 34/105 (32%), Gaps = 8/105 (7%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
              G++   A ++ L T   N++N +T G+    V+         + +      V  G  
Sbjct: 6   LGTGVSGLAAAQKGLDTTGHNIANVNTTGYNRQTVE-------QISTVGIPFGGVFLGNG 58

Query: 65  YLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109
                +    +  +  +  +   + F   + +    +R   F   
Sbjct: 59  TQVSSISRAFNEFSYTEV-IYNKSQFNYNNTQTTNASRLDNFLAN 102



 Score = 36.8 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 6/41 (14%), Positives = 16/41 (39%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E   +I   Q +++   +I    ++    ++ + 
Sbjct: 641 SGVNLDEEAANLIRYQQAYSAAARIISIANETFDSLLQAVR 681


>gi|269961597|ref|ZP_06175959.1| Flagellar basal-body rod protein flgC [Vibrio harveyi 1DA3]
 gi|269833638|gb|EEZ87735.1| Flagellar basal-body rod protein flgC [Vibrio harveyi 1DA3]
          Length = 124

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 23/43 (53%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N M EM  MI  ++ + +   + D +++ +L  ++
Sbjct: 79  GYIYKPNVNVMEEMANMISASRAYQTNVQVADSSKQMLLRTLQ 121


>gi|197285512|ref|YP_002151384.1| flagellar basal-body rod protein [Proteus mirabilis HI4320]
 gi|227356003|ref|ZP_03840395.1| flagellar basal-body rod protein [Proteus mirabilis ATCC 29906]
 gi|194682999|emb|CAR43448.1| flagellar basal-body rod protein [Proteus mirabilis HI4320]
 gi|227163991|gb|EEI48893.1| flagellar basal-body rod protein [Proteus mirabilis ATCC 29906]
          Length = 134

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 6/42 (14%), Positives = 20/42 (47%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N + + EM   I  ++ + +   +++  +  M + +
Sbjct: 89  GYVRKPNVDVVGEMINTISASRSYQANVEVMNTAKSLMQKTL 130



 Score = 36.0 bits (81), Expect = 4.7,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 30/79 (37%), Gaps = 6/79 (7%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSEVVGAIKNDIDQKI 56
          + F+I  +A  A  QRL+  A NM+N    VG     +R  +V F     A ++     +
Sbjct: 5  SIFDISGSALSAQSQRLNVSASNMANVDSVVGPDGEPYRAKQVVFQVNAPAGQDIGGVHV 64

Query: 57 SFVASGKEYLSKEVGSFIS 75
          + V         E      
Sbjct: 65 TQVVDDPTPFRMEYQPGNP 83


>gi|88811799|ref|ZP_01127053.1| flagellar basal body rod protein [Nitrococcus mobilis Nb-231]
 gi|88791190|gb|EAR22303.1| flagellar basal body rod protein [Nitrococcus mobilis Nb-231]
          Length = 139

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 23/43 (53%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++  SN N++  M  MI  ++ + +   ++  +   +L+ +R
Sbjct: 94  GYVYRSNVNTVEAMVNMISASRSYQNNVEVVSTSRDLLLQTLR 136



 Score = 42.2 bits (97), Expect = 0.063,   Method: Composition-based stats.
 Identities = 14/92 (15%), Positives = 29/92 (31%), Gaps = 10/92 (10%)

Query: 1  MQTSFN----IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKN 50
          M  +      +  +A  A   RL+  A NM+N DTV       ++  +  F+  +    +
Sbjct: 1  MIMALFDIFDVAGSAMSAQALRLNITASNMANADTVASTPERAYKARQPVFAAALNTAHD 60

Query: 51 DIDQKISFVASGKEYLSKEVGSFISTGTELDF 82
           +      +       +     +       D 
Sbjct: 61 TVSAVPVQLRGVVTSSAAAEPLYQPNNPLADA 92


>gi|260597443|ref|YP_003210014.1| flagellar basal body rod protein FlgC [Cronobacter turicensis
           z3032]
 gi|260216620|emb|CBA29913.1| Flagellar basal-body rod protein flgC [Cronobacter turicensis
           z3032]
          Length = 134

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 6/43 (13%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N + + EM   +  ++ + +   +++  +  ML+ + 
Sbjct: 89  GYVRMPNVDVVGEMVNSMSASRSYQANVEVLNTVKSMMLKTLT 131



 Score = 39.1 bits (89), Expect = 0.52,   Method: Composition-based stats.
 Identities = 15/105 (14%), Positives = 29/105 (27%), Gaps = 7/105 (6%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDT-VG-----FRTIKVKFS-EVVGAIKNDIDQ 54
              F+I  +A  A  +R++  A N++N D+  G     +R  +V F  +          +
Sbjct: 4   LNIFDIAGSAMTAQSKRMNVAASNLANADSATGPDGQPYRAKQVIFQVDAAPGAATGGVK 63

Query: 55  KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
               V S                 +    +               
Sbjct: 64  VTDVVESQAPDKLVYEPGNPLADAKGYVRMPNVDVVGEMVNSMSA 108


>gi|212639569|ref|YP_002316089.1| flagellar basal body rod protein FlgC [Anoxybacillus flavithermus
           WK1]
 gi|212561049|gb|ACJ34104.1| Flagellar basal body rod protein FlgC [Anoxybacillus flavithermus
           WK1]
          Length = 145

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 7/42 (16%), Positives = 25/42 (59%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G+++  N + + EM  ++  T+ + +  T+++  +  +++A+
Sbjct: 100 GYVQLPNVDPLKEMVDLMSATRSYEANVTVLNATKGMLMKAL 141



 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/32 (37%), Positives = 18/32 (56%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32
          M  SFN+  +A  A   R+  ++ NM+N DT 
Sbjct: 1  MFQSFNVSASALTAQRLRMDVISANMANVDTT 32


>gi|156934442|ref|YP_001438358.1| flagellar basal body rod protein FlgC [Cronobacter sakazakii ATCC
           BAA-894]
 gi|156532696|gb|ABU77522.1| hypothetical protein ESA_02273 [Cronobacter sakazakii ATCC BAA-894]
          Length = 134

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 6/43 (13%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N + + EM   +  ++ + +   +++  +  ML+ + 
Sbjct: 89  GYVRMPNVDVVGEMVNSMSASRSYQANVEVLNTVKSMMLKTLT 131



 Score = 39.5 bits (90), Expect = 0.39,   Method: Composition-based stats.
 Identities = 15/105 (14%), Positives = 29/105 (27%), Gaps = 7/105 (6%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDT-VG-----FRTIKVKFS-EVVGAIKNDIDQ 54
              F+I  +A  A  +R++  A N++N D+  G     +R  +V F  +          +
Sbjct: 4   LNIFDIAGSAMTAQSKRMNVAASNLANADSATGPDGQPYRAKQVVFQVDAAPGAATGGVK 63

Query: 55  KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
               V S                 +    +               
Sbjct: 64  VTDVVESQAPDKLVYEPGNPLADAKGYVRMPNVDVVGEMVNSMSA 108


>gi|312962590|ref|ZP_07777080.1| flagellar basal-body rod protein FlgC [Pseudomonas fluorescens WH6]
 gi|311283170|gb|EFQ61761.1| flagellar basal-body rod protein FlgC [Pseudomonas fluorescens WH6]
          Length = 147

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 30/72 (41%), Gaps = 6/72 (8%)

Query: 168 GFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
           G V  +++  +   P  P  +        G++   N N + EM  MI  ++ F +   ++
Sbjct: 79  GVVEDQSNLEARYEPNHPAANEK------GYVYYPNVNVVEEMADMISASRSFQTNAEMM 132

Query: 228 DENEKSMLEAIR 239
           +  +  M + + 
Sbjct: 133 NTAKTMMQKVLT 144



 Score = 42.9 bits (99), Expect = 0.036,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 6/56 (10%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQ 54
          FNI  +   A   RL+TVA N++N +TV       +R     F+ +  A +N    
Sbjct: 7  FNIAGSGMSAQTTRLNTVASNIANAETVSSSIDQTYRARHPVFATMFQAGQNGGSD 62


>gi|157692298|ref|YP_001486760.1| flagellar basal body rod protein FlgC [Bacillus pumilus SAFR-032]
 gi|157681056|gb|ABV62200.1| flagellar basal body rod protein [Bacillus pumilus SAFR-032]
          Length = 150

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 25/42 (59%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G+++  N + + EM  +I  ++ + +  T ++ N+  +++A+
Sbjct: 105 GYVQTPNVDPLKEMVDLISSSRSYEANVTALNANKSMLMKAL 146



 Score = 42.9 bits (99), Expect = 0.043,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 37/114 (32%), Gaps = 17/114 (14%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTV------G----FRTIKV-------KFSEVV 45
           +  N   +A  A   R+  V+ N++N DT       G    +R   V        FS ++
Sbjct: 5   SGVNASASALTAQRLRMDVVSSNLANMDTTRAKQVDGNWEPYRRKLVTLQPSGESFSSIL 64

Query: 46  GAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
            +  N   +  + V + K    +   +     T  D    G        P   +
Sbjct: 65  NSSMNSSGKLGNGVKATKITEDETPFNLQYDPTNPDANENGYVQTPNVDPLKEM 118


>gi|120598230|ref|YP_962804.1| flagellar basal body rod protein FlgC [Shewanella sp. W3-18-1]
 gi|146293692|ref|YP_001184116.1| flagellar basal body rod protein FlgC [Shewanella putrefaciens
           CN-32]
 gi|120558323|gb|ABM24250.1| flagellar basal-body rod protein FlgC [Shewanella sp. W3-18-1]
 gi|145565382|gb|ABP76317.1| flagellar basal-body rod protein FlgC [Shewanella putrefaciens
           CN-32]
 gi|319427091|gb|ADV55165.1| flagellar basal-body rod protein FlgC [Shewanella putrefaciens 200]
          Length = 138

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 19/42 (45%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           GF+   N N M EM  MI  ++ +     + +  +  + + +
Sbjct: 93  GFIYKPNVNVMEEMADMISASRSYQMNVQVAEAAKSMLQQTL 134



 Score = 37.5 bits (85), Expect = 1.6,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 25/58 (43%), Gaps = 6/58 (10%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQ 54
          + F++  +   A   RL+T A N++N D+V       +R+    F   +   ++    
Sbjct: 5  SIFDVAGSGMSAQSVRLNTTASNIANADSVSSSIDKTYRSRHPIFEAEMAKAQSQQQT 62


>gi|318605240|emb|CBY26738.1| flagellar basal-body rod protein FlgC [Yersinia enterocolitica
           subsp. palearctica Y11]
          Length = 134

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 20/43 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N +   EM   I  ++ + +   +++  +  ML+ + 
Sbjct: 89  GYVRMPNVDVTGEMVNTISASRSYQANVEVLNTTKSLMLKTLT 131



 Score = 37.9 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 22/58 (37%), Gaps = 6/58 (10%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSEVVGAIKNDID 53
             F+I  +A  A  QRL+  A NM+N     G     +R  +V F       +    
Sbjct: 4  LNIFDIAGSALSAQSQRLNVSASNMANADSVTGPDGQPYRAKQVVFQVAAQPGQETGG 61


>gi|42524765|ref|NP_970145.1| flagellar basal-body rod protein [Bdellovibrio bacteriovorus HD100]
 gi|39576975|emb|CAE78204.1| flagellar basal-body rod protein [Bdellovibrio bacteriovorus HD100]
          Length = 147

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 21/42 (50%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N N M EM  MI  ++ + +  T +  ++   L A+
Sbjct: 102 GYVAYPNINLMEEMTNMIQASRSYEANVTAVQASKDMALSAL 143



 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 6/52 (11%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGA 47
           T   I  +   A   R++T+A N++N +T     G  +R   V F  +  A
Sbjct: 5  LTGMRISSSGMAAQRMRMNTIASNIANINTTQTPEGGPYRRKDVVFEAMPDA 56


>gi|46578934|ref|YP_009742.1| flagellar hook-associated protein FlgK [Desulfovibrio vulgaris
          str. Hildenborough]
 gi|46448346|gb|AAS95001.1| flagellar hook-associated protein FlgK, putative [Desulfovibrio
          vulgaris str. Hildenborough]
 gi|311232792|gb|ADP85646.1| flagellar hook-associated protein FlgK [Desulfovibrio vulgaris
          RCH1]
          Length = 698

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 31/73 (42%), Gaps = 2/73 (2%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV--VGAIKNDIDQKISFVA 60
          + FN+G  A    +  + T  +N++N +T G+   +V+F E   +      + Q +    
Sbjct: 5  SLFNLGWNALNGAQSAIQTTGNNIANVNTPGYSRQEVRFEEAPTLDKFGGQMGQGVYAAE 64

Query: 61 SGKEYLSKEVGSF 73
            + +      S+
Sbjct: 65 VIRHFNKFLFSSY 77



 Score = 39.1 bits (89), Expect = 0.61,   Method: Composition-based stats.
 Identities = 6/38 (15%), Positives = 14/38 (36%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           S  N   EM  ++     + +   L+   ++     +R
Sbjct: 658 SGVNLDEEMASLVKFQHSYKAAAKLVTTADEMFQVLLR 695


>gi|327399355|ref|YP_004340224.1| flagellar basal-body rod protein FlgC [Hippea maritima DSM 10411]
 gi|327181984|gb|AEA34165.1| flagellar basal-body rod protein FlgC [Hippea maritima DSM 10411]
          Length = 137

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 18/127 (14%), Positives = 46/127 (36%)

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           +SG        ++        +     E G   ++  V   +G          V+  +  
Sbjct: 11  SSGMSAQRLRMNIISSNIANADTVRTPEGGPYKRRDVVFEAIGYSKFSDVLKKVQVADII 70

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                P    +  + +  K G++   N N + EM  +I   + + +  ++ID  ++++  
Sbjct: 71  RDDTPPKLVYDPSNPLANKDGYVAYPNINPVIEMTNLIDAMRTYQANASVIDSAKQTIQA 130

Query: 237 AIRNIAS 243
           A+  + +
Sbjct: 131 ALGILRA 137



 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 40/128 (31%), Gaps = 12/128 (9%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDIDQKIS 57
           S NI  +   A   R++ ++ N++N DTV    G  ++   V F  +  +  +D+ +K+ 
Sbjct: 6   SMNIASSGMSAQRLRMNIISSNIANADTVRTPEGGPYKRRDVVFEAIGYSKFSDVLKKVQ 65

Query: 58  FV------ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDD 111
                      K             G      +                  +     +  
Sbjct: 66  VADIIRDDTPPKLVYDPSNPLANKDGYVAYPNINPVIEMTNLIDAMRTYQANASVIDSAK 125

Query: 112 GSLVSASG 119
            ++ +A G
Sbjct: 126 QTIQAALG 133


>gi|213026534|ref|ZP_03340981.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhi str. 404ty]
          Length = 108

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 6/43 (13%), Positives = 22/43 (51%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G+++  N + + EM   +  ++ + +   +++  +  ML+ + 
Sbjct: 63  GYVKMPNVDVVGEMVNTMSASRSYQANIEVLNTVKSMMLKTLT 105


>gi|153940778|ref|YP_001392018.1| flagellar hook-associated protein FlgK [Clostridium botulinum F
          str. Langeland]
 gi|152936674|gb|ABS42172.1| flagellar hook-associated protein FlgK [Clostridium botulinum F
          str. Langeland]
 gi|295320033|gb|ADG00411.1| flagellar hook-associated protein FlgK [Clostridium botulinum F
          str. 230613]
          Length = 621

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 20/39 (51%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
           NIG +   A +  L+T + N++N  T G+   +V+   
Sbjct: 8  LNIGKSGMFAQQGALNTTSHNIANASTEGYSRQRVELQT 46



 Score = 39.9 bits (91), Expect = 0.36,   Method: Composition-based stats.
 Identities = 4/40 (10%), Positives = 14/40 (35%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           S  +   E   ++     + +   +I   ++ +   I  +
Sbjct: 580 SGVSMDEEFANLVQFNHCYQANAKIISTVDQLLDVVINGL 619


>gi|120603465|ref|YP_967865.1| flagellar hook-associated protein FlgK [Desulfovibrio vulgaris
          DP4]
 gi|120563694|gb|ABM29438.1| flagellar hook-associated protein FlgK [Desulfovibrio vulgaris
          DP4]
          Length = 698

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 31/73 (42%), Gaps = 2/73 (2%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV--VGAIKNDIDQKISFVA 60
          + FN+G  A    +  + T  +N++N +T G+   +V+F E   +      + Q +    
Sbjct: 5  SLFNLGWNALNGAQSAIQTTGNNIANVNTPGYSRQEVRFEEAPTLDKFGGQMGQGVYAAE 64

Query: 61 SGKEYLSKEVGSF 73
            + +      S+
Sbjct: 65 VIRHFNKFLFSSY 77



 Score = 38.3 bits (87), Expect = 1.0,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 13/37 (35%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N   EM  ++     + +   L+   ++     +
Sbjct: 658 SGVNLDEEMASLVKFQHSYKAAAKLVTTADEMFQVLL 694


>gi|225159033|ref|ZP_03725343.1| flagellar basal-body rod protein FlgC [Opitutaceae bacterium TAV2]
 gi|224802412|gb|EEG20674.1| flagellar basal-body rod protein FlgC [Opitutaceae bacterium TAV2]
          Length = 140

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 21/44 (47%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
             G +   N N  YEM  +I  ++ + +   ++  + +  L+A+
Sbjct: 93  ASGMVTMPNVNLAYEMVDLITASRTYEANLQVVKNSRQMALKAL 136



 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 21/53 (39%), Gaps = 6/53 (11%)

Query: 10 AAQLALEQRLSTVADNMSNTDTV-G-----FRTIKVKFSEVVGAIKNDIDQKI 56
          +A  A + RL  +A N++N  T  G     ++   V F   +      ID   
Sbjct: 12 SALNAQKTRLDIIAQNIANAHTTRGPNGLPYQRQMVSFESELTNKLGQIDGVP 64


>gi|153837083|ref|ZP_01989750.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
          AQ3810]
 gi|149749671|gb|EDM60416.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
          AQ3810]
          Length = 457

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 20/53 (37%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54
              NI L+   A    L   A N++N +T G+   +   + V     N +  
Sbjct: 1  MNLVNIALSGLNANRVALDVTAQNVANVNTPGYSRQQALMATVGDGKSNRLSS 53


>gi|168180854|ref|ZP_02615518.1| flagellar hook-associated protein FlgK [Clostridium botulinum
          NCTC 2916]
 gi|182668369|gb|EDT80348.1| flagellar hook-associated protein FlgK [Clostridium botulinum
          NCTC 2916]
          Length = 621

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 20/39 (51%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
           NIG +   A +  L+T + N++N  T G+   +V+   
Sbjct: 8  LNIGKSGMFAQQGALNTTSHNIANASTEGYSRQRVELQT 46



 Score = 39.5 bits (90), Expect = 0.37,   Method: Composition-based stats.
 Identities = 4/40 (10%), Positives = 14/40 (35%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           S  +   E   ++     + +   +I   ++ +   I  +
Sbjct: 580 SGVSMDEEFANLVQFNHCYQANAKIISTVDQLLDVVINGL 619


>gi|158320509|ref|YP_001513016.1| flagellar basal-body rod protein FlgB [Alkaliphilus oremlandii
          OhILAs]
 gi|158140708|gb|ABW19020.1| flagellar basal-body rod protein FlgB [Alkaliphilus oremlandii
          OhILAs]
          Length = 131

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 32/81 (39%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M  + NI   A  A  +R   + +N++N +T  F+   V F +V+    N    K +   
Sbjct: 1  MYNNINILTKALDASWRRNEVITNNIANAETPNFKRSDVIFEDVLREHLNASKLKGTITN 60

Query: 61 SGKEYLSKEVGSFISTGTELD 81
          +    ++      I    + D
Sbjct: 61 ANHIPINGGHLKDIQPQIKTD 81


>gi|168187558|ref|ZP_02622193.1| flagellar basal-body rod protein FlgC [Clostridium botulinum C str.
           Eklund]
 gi|169294598|gb|EDS76731.1| flagellar basal-body rod protein FlgC [Clostridium botulinum C str.
           Eklund]
          Length = 145

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 23/42 (54%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N N + EM  MI  T+ + +  T I+ ++   ++A+
Sbjct: 100 GYVLMPNVNILNEMADMIAATRAYEANVTAINSSKNMFMKAL 141


>gi|327480018|gb|AEA83328.1| flagellar basal body rod protein FlgC [Pseudomonas stutzeri DSM
           4166]
          Length = 147

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N + EM  MI  ++ F +   L++  +  + + + 
Sbjct: 102 GYVYYPNVNVVEEMADMISASRAFQTNAELMNTAKTMLQKVLT 144



 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 29/80 (36%), Gaps = 6/80 (7%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKISF 58
          FNI  +   A   RL+T++ N++N +TV       +R     F+ V        DQ +  
Sbjct: 7  FNIAGSGMSAQSTRLNTISSNIANAETVSSSVDQTYRARHPVFATVFQQANGQPDQSLFA 66

Query: 59 VASGKEYLSKEVGSFISTGT 78
                   + +G       
Sbjct: 67 GQDQAGVGVQVLGVVEDQSE 86


>gi|262394941|ref|YP_003286795.1| flagellar basal-body rod protein FlgC [Vibrio sp. Ex25]
 gi|262338535|gb|ACY52330.1| flagellar basal-body rod protein FlgC [Vibrio sp. Ex25]
          Length = 137

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 23/43 (53%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N M EM  MI  ++ + +   + D +++ +L  ++
Sbjct: 92  GYIYKPNVNVMEEMANMISASRAYQTNVQVADSSKQMLLRTLQ 134



 Score = 38.3 bits (87), Expect = 0.96,   Method: Composition-based stats.
 Identities = 15/81 (18%), Positives = 26/81 (32%), Gaps = 6/81 (7%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56
            FN+  +A  A   RL+T + N++N D+V       ++     F   +       D   
Sbjct: 5  NVFNVTGSAMSAESVRLNTTSSNLANADSVSSSAKDTYKARHAVFGAELSNAMRGGDTVP 64

Query: 57 SFVASGKEYLSKEVGSFISTG 77
            V    E        +    
Sbjct: 65 VKVMGIVESDKPLSAEYNPDH 85


>gi|70731825|ref|YP_261567.1| flagellar basal body rod protein FlgC [Pseudomonas fluorescens
           Pf-5]
 gi|68346124|gb|AAY93730.1| flagellar basal-body rod protein FlgC [Pseudomonas fluorescens
           Pf-5]
          Length = 147

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 30/72 (41%), Gaps = 6/72 (8%)

Query: 168 GFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
           G V  +++  +   P  P  D        G++   N N + EM  MI  ++ F +   ++
Sbjct: 79  GVVEDQSNLEARYEPNHPAADAK------GYVYYPNVNVVEEMADMISASRSFQTNAEMM 132

Query: 228 DENEKSMLEAIR 239
           +  +  M + + 
Sbjct: 133 NTAKTMMQKVLT 144



 Score = 39.1 bits (89), Expect = 0.59,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 26/63 (41%), Gaps = 6/63 (9%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKISF 58
          FNI  +   A   RL+TVA N++N ++V       +R     F+ +    ++     +  
Sbjct: 7  FNIAGSGMSAQTTRLNTVASNIANAESVSSSIDQTYRARHPVFATMFQGAQSGGSDSLFQ 66

Query: 59 VAS 61
             
Sbjct: 67 NQD 69


>gi|239826611|ref|YP_002949235.1| flagellar basal body rod protein FlgC [Geobacillus sp. WCH70]
 gi|239806904|gb|ACS23969.1| flagellar basal-body rod protein FlgC [Geobacillus sp. WCH70]
          Length = 150

 Score = 52.2 bits (123), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 7/42 (16%), Positives = 23/42 (54%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N + + EM  ++  T+ + +  T+ +  +  +++A+
Sbjct: 105 GYVRLPNVDPLKEMVDLMSATRSYEANVTVFNATKGMLMKAL 146



 Score = 45.2 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 35/114 (30%), Gaps = 17/114 (14%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTV------G----FRTIKVK-------FSEVV 45
            S +I  +A  A   R+  ++ NM+N DT       G    +R   V        FS  +
Sbjct: 5   QSLDITASALTAQRLRMDVISSNMANVDTTHARLVNGQWEPYRRKFVVMEPRQEGFSTYL 64

Query: 46  GAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
            A  N      + V   K    +     +   +  D    G        P   +
Sbjct: 65  QAAMNSRSSVGNGVRVTKIMEDQTPFKLVYDPSHPDADPNGYVRLPNVDPLKEM 118


>gi|220913735|ref|YP_002489044.1| flagellar basal-body rod protein FlgB [Arthrobacter
          chlorophenolicus A6]
 gi|219860613|gb|ACL40955.1| flagellar basal-body rod protein FlgB [Arthrobacter
          chlorophenolicus A6]
          Length = 113

 Score = 52.2 bits (123), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 34/82 (41%), Gaps = 2/82 (2%)

Query: 1  MQTSFNIGL--AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
          M  S       +A   L  R  T+A+N++N +T  ++  +V F + + A     +   S 
Sbjct: 1  MLESVTSAALASALDGLALRQRTIANNIANINTPNYKAKRVSFEDELAASVRRGNGHTSA 60

Query: 59 VASGKEYLSKEVGSFISTGTEL 80
                  ++  G+ ++  TE 
Sbjct: 61 SVEASLEPTQLNGNNVNLDTET 82


>gi|171059414|ref|YP_001791763.1| flagellar basal-body rod protein FlgC [Leptothrix cholodnii SP-6]
 gi|170776859|gb|ACB34998.1| flagellar basal-body rod protein FlgC [Leptothrix cholodnii SP-6]
          Length = 136

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 25/43 (58%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++  SN N++ EM  MI  ++ + +   +++  +  +L+ ++
Sbjct: 89  GYVTYSNVNAVEEMVNMISASRSYQNNVEVMNTAKTLLLKTLQ 131



 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 38/109 (34%), Gaps = 6/109 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQ 54
           M   FN+  +A  A  QRL+ VA N++N DTV       F+  +V F  V          
Sbjct: 3   MLNIFNVAGSAVSAQSQRLNAVATNLANADTVAGPDGQSFKARQVMFQSVQMGEMGAAGV 62

Query: 55  KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103
           K+S +   +    +             +    +     E    I  +R 
Sbjct: 63  KVSQITEDQSPGRRVHDPKHPQADAEGYVTYSNVNAVEEMVNMISASRS 111


>gi|296531743|ref|ZP_06894568.1| flagellar hook-associated protein FlgK [Roseomonas cervicalis
          ATCC 49957]
 gi|296267926|gb|EFH13728.1| flagellar hook-associated protein FlgK [Roseomonas cervicalis
          ATCC 49957]
          Length = 485

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 10/52 (19%), Positives = 29/52 (55%), Gaps = 1/52 (1%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGF-RTIKVKFSEVVGAIKNDIDQ 54
          + +  L++  A +++ + +++N++N +T G+ R    +   +V  I + +D 
Sbjct: 6  ALSNALSSLAAEQRQAAILSNNIANANTPGYVRRDMPRSERLVAGIGSGVDT 57



 Score = 36.0 bits (81), Expect = 4.6,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 19/43 (44%), Gaps = 3/43 (6%)

Query: 200 EDSN---ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           E SN    N   E+ +++ + Q +++   +I    + + E   
Sbjct: 440 ELSNKTAVNVDEELQRLLLVQQTYSASVQIIQAATRMLDELAT 482


>gi|312109475|ref|YP_003987791.1| flagellar hook-associated protein FlgK [Geobacillus sp. Y4.1MC1]
 gi|311214576|gb|ADP73180.1| flagellar hook-associated protein FlgK [Geobacillus sp. Y4.1MC1]
          Length = 534

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 19/41 (46%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S+ +   EM  MI     +N+   +I   ++ + + I ++ 
Sbjct: 490 SSVSLDEEMTNMIKFQHAYNAAARMITAIDEMLDKIINDMG 530



 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 21/46 (45%), Gaps = 3/46 (6%)

Query: 1  MQTSFN---IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
          M ++F+   +        +  L   A N++N +T G+   +V F E
Sbjct: 1  MLSTFHGLEVAKRGMFTQQAALYVTAHNIANANTPGYSRQRVNFVE 46


>gi|28900128|ref|NP_799783.1| putative flagellar hook-associated protein [Vibrio
          parahaemolyticus RIMD 2210633]
 gi|260365778|ref|ZP_05778274.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
          K5030]
 gi|260880700|ref|ZP_05893055.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
          AN-5034]
 gi|260897694|ref|ZP_05906190.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
          Peru-466]
 gi|28808411|dbj|BAC61616.1| putative flagellar hook-associated protein [Vibrio
          parahaemolyticus RIMD 2210633]
 gi|308086274|gb|EFO35969.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
          Peru-466]
 gi|308092694|gb|EFO42389.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
          AN-5034]
 gi|308114946|gb|EFO52486.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
          K5030]
          Length = 457

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 20/53 (37%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54
              NI L+   A    L   A N++N +T G+   +   + V     N +  
Sbjct: 1  MNLVNIALSGLNANRVALDVTAQNVANVNTPGYSRQQALMATVGDGKSNRLSS 53


>gi|294140191|ref|YP_003556169.1| flagellar hook-associated protein FlgK [Shewanella violacea
          DSS12]
 gi|293326660|dbj|BAJ01391.1| flagellar hook-associated protein FlgK, putative [Shewanella
          violacea DSS12]
          Length = 638

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 23/52 (44%), Gaps = 1/52 (1%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M    NI     LA + +L+  ++N++N +T G+     + S +      D 
Sbjct: 3  MD-LLNIARTGVLASQSQLAVTSNNIANANTQGYHRQVAEQSSLESQRFGDS 53



 Score = 39.5 bits (90), Expect = 0.44,   Method: Composition-based stats.
 Identities = 4/41 (9%), Positives = 12/41 (29%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E   ++   Q + +   ++    +        + 
Sbjct: 598 SGVNLDEEAANLMRFQQAYQASARIMTTANEIFETLFNAVR 638


>gi|77359720|ref|YP_339295.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Pseudoalteromonas haloplanktis TAC125]
 gi|76874631|emb|CAI85852.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Pseudoalteromonas haloplanktis TAC125]
          Length = 143

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 21/42 (50%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N N + EM  MI  ++ + +   + D  ++ + + +
Sbjct: 97  GYIYKPNVNVVEEMANMISASRSYQTNVQVADAAKQMLSKTL 138



 Score = 39.5 bits (90), Expect = 0.44,   Method: Composition-based stats.
 Identities = 17/96 (17%), Positives = 36/96 (37%), Gaps = 7/96 (7%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKF-SEVVGAIKNDIDQK 55
             F+I  +   A   RL+T A N+SN +T+       +R  +  F +E+  A  +  + +
Sbjct: 5   NVFDIAGSGMSAQNVRLNTTASNISNANTISSSQDKTYRARQPVFAAELTKASASASNPQ 64

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA 91
            S V      + +              + + + +  
Sbjct: 65  GSAVGVKVLGIVESNKPLQIEYNPNHPSADENGYIY 100


>gi|320354701|ref|YP_004196040.1| hypothetical protein Despr_2613 [Desulfobulbus propionicus DSM
          2032]
 gi|320123203|gb|ADW18749.1| protein of unknown function DUF1078 domain protein [Desulfobulbus
          propionicus DSM 2032]
          Length = 117

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 22/48 (45%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI 48
          M +     L+   A   ++ + A N++N +T G+R  +V  S  V   
Sbjct: 1  MISGIQSALSGAQAFSAKIESNAHNIANLNTEGYRKSRVVLSAGVAQS 48



 Score = 41.0 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 6/46 (13%), Positives = 19/46 (41%), Gaps = 2/46 (4%)

Query: 195 KRGF--LEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            +G+   E SN +   E+  ++  T  + +    +  ++  +   +
Sbjct: 68  AQGYAVRELSNVDLGEEIPDLMRNTHGYAANLRTVQVSDNMLQTLL 113


>gi|269103183|ref|ZP_06155880.1| flagellar hook-associated protein FlgK [Photobacterium damselae
           subsp. damselae CIP 102761]
 gi|268163081|gb|EEZ41577.1| flagellar hook-associated protein FlgK [Photobacterium damselae
           subsp. damselae CIP 102761]
          Length = 661

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 17/121 (14%), Positives = 37/121 (30%), Gaps = 2/121 (1%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS--EVVGAIKNDIDQKISFVASG 62
             IG++     +++L   + N+SN +T G+    V+    +      N            
Sbjct: 6   MQIGMSGLRTSQKQLDVASHNISNVNTPGYSRQVVEQKADDAFYNGSNYYGTGAYIDNVS 65

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
           + Y          + T L+ A        +          +    + D  + V +   +P
Sbjct: 66  RAYDQFAARELTLSTTHLEEANVRQQNMMMLDDFTSKSAVNTVNSMNDFYNSVRSLSDHP 125

Query: 123 V 123
            
Sbjct: 126 N 126


>gi|261885051|ref|ZP_06009090.1| hypothetical protein CfetvA_07580 [Campylobacter fetus subsp.
          venerealis str. Azul-94]
          Length = 58

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 8/54 (14%), Positives = 25/54 (46%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54
          M   +  G++   +    +  +++++SN +TVG+++   +   V+    +    
Sbjct: 1  MMIGYYNGISGIKSGNIGIDVISNDISNINTVGYKSSTAECKSVLYPGLDHTSS 54


>gi|260899395|ref|ZP_05907790.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
          AQ4037]
 gi|308109296|gb|EFO46836.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
          AQ4037]
          Length = 457

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 20/53 (37%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54
              NI L+   A    L   A N++N +T G+   +   + V     N +  
Sbjct: 1  MNLVNIALSGLNANRVALDVTAQNVANVNTPGYSRQQALMATVGDGKSNRLSS 53


>gi|261856362|ref|YP_003263645.1| flagellar basal-body rod protein FlgC [Halothiobacillus
           neapolitanus c2]
 gi|261836831|gb|ACX96598.1| flagellar basal-body rod protein FlgC [Halothiobacillus
           neapolitanus c2]
          Length = 133

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 22/43 (51%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++  SN N + EM  M+  ++ + +   ++D  +   L  ++
Sbjct: 88  GYVYSSNVNPVEEMVNMLSASRSYQTNVQMMDTAKNLALRTLQ 130



 Score = 37.2 bits (84), Expect = 2.3,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 6/54 (11%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKN 50
          + FN+  +A  A   RL+  A NM+N D V       ++  +  F +V+     
Sbjct: 5  SIFNVSSSAMSAQSLRLNATASNMANADAVATKPEDAYKAREPVFQQVMEQNGG 58


>gi|170725953|ref|YP_001759979.1| flagellar basal body rod protein FlgC [Shewanella woodyi ATCC
           51908]
 gi|169811300|gb|ACA85884.1| flagellar basal-body rod protein FlgC [Shewanella woodyi ATCC
           51908]
          Length = 139

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 20/43 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           GF+   N N M EM  MI  ++ +     + +  +  + + +R
Sbjct: 94  GFIYKPNVNVMEEMADMISASRSYQMNVQVAEAAKSMLQQTLR 136



 Score = 36.4 bits (82), Expect = 3.4,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 21/50 (42%), Gaps = 6/50 (12%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVG 46
            FN+  +   A   RL+T A N++N D+V       +R     F   + 
Sbjct: 6  NIFNVSGSGMSAQSVRLNTTASNIANADSVSSSIDETYRARHPIFEAEMA 55


>gi|296283218|ref|ZP_06861216.1| flagellar hook-associated protein FlgK [Citromicrobium
          bathyomarinum JL354]
          Length = 698

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 20/45 (44%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA 47
                ++   A +  + +V++N++N  T G+   +V  S  V  
Sbjct: 5  NILGTAVSGLSASQAGIRSVSNNIANISTPGYARERVSLSTGVTQ 49



 Score = 39.1 bits (89), Expect = 0.54,   Method: Composition-based stats.
 Identities = 6/37 (16%), Positives = 15/37 (40%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N   E+ QM+ L   +++   ++    +     +
Sbjct: 658 SGVNLDEELSQMVVLQNSYSAAARVMTTATQMYDTLL 694


>gi|260772272|ref|ZP_05881188.1| flagellar basal-body rod protein FlgC [Vibrio metschnikovii CIP
           69.14]
 gi|260611411|gb|EEX36614.1| flagellar basal-body rod protein FlgC [Vibrio metschnikovii CIP
           69.14]
          Length = 138

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 23/43 (53%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           GF+   N N M EM  MI  ++ + +   + D +++ +L  ++
Sbjct: 93  GFIYKPNVNVMEEMANMISASRSYQTNVQVADASKQMLLRTLQ 135


>gi|86153269|ref|ZP_01071473.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni HB93-13]
 gi|121612733|ref|YP_001000227.1| flagellar basal body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|167005182|ref|ZP_02270940.1| flagellar basal body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|85842995|gb|EAQ60206.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni HB93-13]
 gi|87250029|gb|EAQ72987.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni 81-176]
          Length = 164

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 19/46 (41%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G++   N N + EM  +I  T+ + +  +     +     AI  + 
Sbjct: 118 GYVAYPNVNPVIEMADLIEATRAYQANVSAFTSAKTIAQSAIDLLR 163



 Score = 43.3 bits (100), Expect = 0.026,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 18/39 (46%), Gaps = 6/39 (15%)

Query: 11 AQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43
             A   R++ ++ N++N +T     G  +R  +V F  
Sbjct: 13 GLSAQRFRMNVISSNIANANTTRTAEGGPYRRREVIFKA 51


>gi|120554030|ref|YP_958381.1| flagellar basal body rod protein FlgB [Marinobacter aquaeolei VT8]
 gi|120323879|gb|ABM18194.1| flagellar basal-body rod protein FlgB [Marinobacter aquaeolei VT8]
          Length = 132

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 15/103 (14%), Positives = 31/103 (30%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
             +  I   A  A  +R   +A+N++N DT G++   V F  ++   ++ +         
Sbjct: 6   DKALGIHEHALQARVKRAEVLANNLANADTPGYKARDVDFQAMMQKAQDSMTGFGMTTTH 65

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDG 104
                +   G+              D              R+ 
Sbjct: 66  SGHMDTSSPGADGELLYRTPHQPSIDGNTVDAQAEQTRFMRNA 108


>gi|330445346|ref|ZP_08308998.1| flagellar basal-body rod protein FlgC [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
 gi|328489537|dbj|GAA03495.1| flagellar basal-body rod protein FlgC [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
          Length = 138

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 25/45 (55%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +GF+   N N M EM  MI  ++ + +   + D +++ +++ ++
Sbjct: 91  AQGFIYKPNVNVMEEMANMISASRSYQNNVQVADASKQMLMKTLQ 135


>gi|315648139|ref|ZP_07901240.1| flagellar basal-body rod protein FlgC [Paenibacillus vortex V453]
 gi|315276785|gb|EFU40128.1| flagellar basal-body rod protein FlgC [Paenibacillus vortex V453]
          Length = 149

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 23/42 (54%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N +   EM  M+  T+ + +  T I+ ++  +++A+
Sbjct: 104 GYVFMPNVDITKEMVDMLAATRSYEANVTAINASKAMIMKAL 145



 Score = 41.8 bits (96), Expect = 0.091,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 33/113 (29%), Gaps = 16/113 (14%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTV------G----FRTIKVKFS------EVVG 46
            SF I  +A  A   R+  ++ N++N +T       G    +R   V F       E + 
Sbjct: 5   NSFGINASALTAQRLRMDVISSNIANAETTRARIENGQAVPYRRKTVVFQPQQESFEGLL 64

Query: 47  AIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
             +         V        +     +   T  D   EG  +         +
Sbjct: 65  RAQMSGQDAGQGVKVAAVQEDQAPLKRVYNPTHPDANTEGYVFMPNVDITKEM 117


>gi|190574257|ref|YP_001972102.1| flagellar hook-associated protein FlgK [Stenotrophomonas
          maltophilia K279a]
 gi|190012179|emb|CAQ45802.1| putative flagellar hook-associated protein [Stenotrophomonas
          maltophilia K279a]
          Length = 626

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 32/83 (38%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M +  + G  A LA ++ L+T + N++N +T G+   KV F+                  
Sbjct: 1  MSSVLSTGTGALLAFQRALATTSHNVANLNTPGYSRQKVNFATADPQNYGYGTVGNGTRI 60

Query: 61 SGKEYLSKEVGSFISTGTELDFA 83
          +     + ++       +  + A
Sbjct: 61 TDIRRTADQLAISRLLDSSGELA 83



 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 15/39 (38%)

Query: 200 EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           E S  N   E   M+ L Q + + + LI   +      +
Sbjct: 583 EVSGVNLDEEAADMLRLQQAYQAASQLISTADSMFQTIL 621


>gi|170760196|ref|YP_001788056.1| flagellar hook-associated protein FlgK [Clostridium botulinum A3
          str. Loch Maree]
 gi|169407185|gb|ACA55596.1| flagellar hook-associated protein FlgK [Clostridium botulinum A3
          str. Loch Maree]
          Length = 621

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 20/39 (51%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
           NIG +   A +  L+T + N++N  T G+   +V+   
Sbjct: 8  LNIGKSGMFAQQGALNTTSHNIANASTEGYSRQRVELQT 46



 Score = 39.5 bits (90), Expect = 0.40,   Method: Composition-based stats.
 Identities = 4/40 (10%), Positives = 14/40 (35%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           S  +   E   ++     + +   +I   ++ +   I  +
Sbjct: 580 SGVSMDEEFANLVQFNHCYQANAKIISTVDQLLDVVINGL 619


>gi|109899396|ref|YP_662651.1| flagellar hook-associated protein FlgK [Pseudoalteromonas atlantica
           T6c]
 gi|109701677|gb|ABG41597.1| flagellar hook-associated protein FlgK [Pseudoalteromonas atlantica
           T6c]
          Length = 709

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 47/130 (36%), Gaps = 4/130 (3%)

Query: 1   MQTS---FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKF-SEVVGAIKNDIDQKI 56
           M  +    +I  +   A  Q LST  +N++N +T G+   +  F +E+ G +     +++
Sbjct: 1   MIRTADLLSIARSGVEASNQLLSTTGNNIANVNTEGYVRERTNFVAELTGGVGQFTTERV 60

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVS 116
               +  +                  A+  + + +  +     ++R      T +    +
Sbjct: 61  MNTFAQNQLRRDTTNLAEHEAYWSKTAVLDNVFASEANSISSSMSRFFASLQTANDDPTN 120

Query: 117 ASGKYPVLDM 126
            S +  VL  
Sbjct: 121 MSARQLVLGD 130


>gi|57238273|ref|YP_178646.1| flagellar basal body rod protein FlgC [Campylobacter jejuni RM1221]
 gi|57167077|gb|AAW35856.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni RM1221]
 gi|315057945|gb|ADT72274.1| Flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni S3]
          Length = 164

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 19/46 (41%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G++   N N + EM  +I  T+ + +  +     +     AI  + 
Sbjct: 118 GYVAYPNVNPVIEMADLIEATRAYQANVSAFTSAKTIAQSAIDLLR 163



 Score = 43.3 bits (100), Expect = 0.026,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 18/39 (46%), Gaps = 6/39 (15%)

Query: 11 AQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43
             A   R++ ++ N++N +T     G  +R  +V F  
Sbjct: 13 GLSAQRFRMNVISSNIANANTTRTAEGGPYRRREVIFKA 51


>gi|254499106|ref|ZP_05111796.1| hypothetical protein LDG_3179 [Legionella drancourtii LLAP12]
 gi|254351645|gb|EET10490.1| hypothetical protein LDG_3179 [Legionella drancourtii LLAP12]
          Length = 408

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 24/195 (12%), Positives = 53/195 (27%), Gaps = 7/195 (3%)

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109
           +D D  I+     K   +            + F L G              T   +    
Sbjct: 210 DDKDVDITPYYDQKIEFAYSSSGAEPGKDSIQFGLNGKQVNIYFGSAHNGSTNSVQLDTV 269

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA--TMGLYSVDMSQ 167
           +            +       +           G+       G+ I    +GL   D  +
Sbjct: 270 EGAFSNEKRTNIEIDYNDGYGVGKQSYWSFDEEGQIAYYYDNGQTIKGIHVGLARFDDME 329

Query: 168 GFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNS 222
             + +             +            ++   LE SN +S  E   ++ L + F +
Sbjct: 330 NNLIQTQDNFFRAKTNRGIHYGRPNNNGFECIRANELEASNVDSTAEFANIVVLQRMFQA 389

Query: 223 ITTLIDENEKSMLEA 237
            + ++D +++ + E 
Sbjct: 390 CSQIMDIDKQLLEEL 404



 Score = 41.0 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 23/157 (14%), Positives = 50/157 (31%), Gaps = 5/157 (3%)

Query: 33  GFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL 92
           GF+   V +S +        +     V       +   G+++    + D A+ G  +F +
Sbjct: 5   GFKRSDVFYSSL--GNGQGEEGMGHGVRVSGMRTNYGPGNYLKGMGDSDLAIVGHGFFVV 62

Query: 93  ESPRGII-LTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQK 151
           +        TRDG F   D   +   +G       ++    +    E       G+ S+ 
Sbjct: 63  KLKNNEFVYTRDGHFNFEDGILIDRKTGGQVQGYDSAGN--LAPIHEKGPQTTPGKASRD 120

Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED 188
             +  +   + +D  +           P+  P    +
Sbjct: 121 IFLKGSFVAHLIDEKKNTDPNIPDPNIPDPTPKAPTE 157


>gi|238751760|ref|ZP_04613248.1| Flagellar basal-body rod protein flgC [Yersinia rohdei ATCC 43380]
 gi|238710031|gb|EEQ02261.1| Flagellar basal-body rod protein flgC [Yersinia rohdei ATCC 43380]
          Length = 134

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 20/43 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N +   EM   I  ++ + +   +++  +  ML+ + 
Sbjct: 89  GYVRMPNVDVTGEMVNTISASRSYQANVEVLNTTKSLMLKTLT 131



 Score = 37.9 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 22/58 (37%), Gaps = 6/58 (10%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSEVVGAIKNDID 53
             F+I  +A  A  QR++  A NM+N     G     +R  +V F       +    
Sbjct: 4  LNIFDIAGSALSAQSQRMNVSASNMANADSVTGPDGQPYRAKQVVFQVAAQPGQETGG 61


>gi|32266907|ref|NP_860939.1| flagellar basal body rod protein FlgC [Helicobacter hepaticus ATCC
           51449]
 gi|32262959|gb|AAP78005.1| flagellar basal body rod protein FlgC [Helicobacter hepaticus ATCC
           51449]
          Length = 163

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 17/43 (39%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N + EM  +I  T+ + +        +     AI 
Sbjct: 117 GYVAYPNVNPVVEMADLIEATRAYQANVAAFQSAKNMASNAIT 159



 Score = 42.5 bits (98), Expect = 0.044,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 6/49 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44
           +SF+I      A   R++T++ N++N +T     G  +R  +V F   
Sbjct: 3  LSSFDISGYGLSAQRVRINTISSNIANANTTRTDEGGPYRRREVIFRAF 51


>gi|86146157|ref|ZP_01064483.1| flagellar basal body rod protein [Vibrio sp. MED222]
 gi|218708802|ref|YP_002416423.1| flagellar basal body rod protein FlgC [Vibrio splendidus LGP32]
 gi|85836104|gb|EAQ54236.1| flagellar basal body rod protein [Vibrio sp. MED222]
 gi|218321821|emb|CAV17789.1| Polar flagellar FlgC [Vibrio splendidus LGP32]
          Length = 137

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 23/43 (53%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N M EM  MI  ++ + +   + D +++ +L  ++
Sbjct: 92  GYIYKPNVNVMEEMANMISASRAYQTNVQVADSSKQMLLRTLQ 134



 Score = 37.5 bits (85), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/81 (18%), Positives = 27/81 (33%), Gaps = 6/81 (7%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56
            FN+  +A  A   RL+T + N++N D+V       ++     F   +   +N      
Sbjct: 5  NVFNVTGSAMSAESVRLNTTSSNLANADSVSSSAKDTYKARHAVFGAELNQARNSGHTVP 64

Query: 57 SFVASGKEYLSKEVGSFISTG 77
            V    E        +    
Sbjct: 65 VKVLGIVESDKPLNAEYNPDH 85


>gi|238788313|ref|ZP_04632107.1| Flagellar basal-body rod protein flgC [Yersinia frederiksenii ATCC
           33641]
 gi|238723559|gb|EEQ15205.1| Flagellar basal-body rod protein flgC [Yersinia frederiksenii ATCC
           33641]
          Length = 134

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 20/43 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N +   EM   I  ++ + +   +++  +  ML+ + 
Sbjct: 89  GYVRMPNVDVTGEMVNTISASRSYQANVEVLNTTKSLMLKTLT 131



 Score = 38.7 bits (88), Expect = 0.72,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 26/68 (38%), Gaps = 6/68 (8%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSEVVGAIKNDIDQK 55
             F+I  +A  A  QR++  A NM+N     G     +R  +V F       +     +
Sbjct: 4  LNIFDIAGSALSAQSQRMNVSASNMANADSVTGPDGQPYRAKQVVFQVAAQPGQETGGVR 63

Query: 56 ISFVASGK 63
          ++ V    
Sbjct: 64 VAQVVDDP 71


>gi|260767929|ref|ZP_05876863.1| flagellar hook-associated protein FlgK [Vibrio furnissii CIP
          102972]
 gi|260615959|gb|EEX41144.1| flagellar hook-associated protein FlgK [Vibrio furnissii CIP
          102972]
 gi|315179632|gb|ADT86546.1| flagellar hook-associated protein [Vibrio furnissii NCTC 11218]
          Length = 457

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 23/53 (43%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54
              NI L+   A    L   A N++N +T G+   +   + V GA  +++  
Sbjct: 1  MNLVNIALSGLNANRVALDVTAQNVANINTPGYSRQQALMASVGGAKYDNLSA 53


>gi|194015045|ref|ZP_03053662.1| flagellar basal-body rod protein FlgC [Bacillus pumilus ATCC 7061]
 gi|194014071|gb|EDW23636.1| flagellar basal-body rod protein FlgC [Bacillus pumilus ATCC 7061]
          Length = 150

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 25/42 (59%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G+++  N + + EM  +I  ++ + +  T ++ N+  +++A+
Sbjct: 105 GYVQTPNVDPLKEMVDLISSSRSYEANVTALNANKSMLMKAL 146



 Score = 42.5 bits (98), Expect = 0.055,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 37/114 (32%), Gaps = 17/114 (14%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTV------G----FRTIKV-------KFSEVV 45
           +  N   +A  A   R+  V+ N++N DT       G    +R   V        FS ++
Sbjct: 5   SGVNASASALTAQRLRMDVVSSNLANMDTTRAKQVDGNWEPYRRKLVTLQPSGESFSSIL 64

Query: 46  GAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
            +  N   +  + V + K    +   +     T  D    G        P   +
Sbjct: 65  NSNMNSSGKLGNGVKATKITEDETPFNLQYDPTNPDANENGYVQTPNVDPLKEM 118


>gi|332533177|ref|ZP_08409046.1| flagellar basal-body rod protein FlgC [Pseudoalteromonas
           haloplanktis ANT/505]
 gi|332037459|gb|EGI73913.1| flagellar basal-body rod protein FlgC [Pseudoalteromonas
           haloplanktis ANT/505]
          Length = 143

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 21/42 (50%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N N + EM  MI  ++ + +   + D  ++ + + +
Sbjct: 97  GYIYKPNVNVVEEMANMISASRSYQTNVQVADAAKQMLSKTL 138



 Score = 39.1 bits (89), Expect = 0.51,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 37/96 (38%), Gaps = 7/96 (7%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKF-SEVVGAIKNDIDQK 55
             F+I  +   A   RL+T A N+SN +T+       +R  +  F +E+  A  +  +Q+
Sbjct: 5   NVFDIAGSGMSAQNVRLNTTASNISNANTISSSQDKTYRARQPVFAAELTKASASVSNQQ 64

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA 91
            S V      + +              + + + +  
Sbjct: 65  GSAVGVKVLGIVESDAPLQIEYNPNHPSADENGYIY 100


>gi|317492430|ref|ZP_07950859.1| flagellar basal-body rod protein FlgC [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316919769|gb|EFV41099.1| flagellar basal-body rod protein FlgC [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 134

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 6/43 (13%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N + + EM   I  ++ + +   +++  +  M++ + 
Sbjct: 89  GYVRMPNVDVVGEMVNSIAASRSYQANVEVLNTTKSLMMKTLT 131



 Score = 40.6 bits (93), Expect = 0.18,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 6/48 (12%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42
          M   F+I  +A  A  QR++  A NM+N     G     +R  +V F 
Sbjct: 3  MLNIFDISGSALAAQSQRMNVAASNMANADSVTGPDGEPYRAKQVVFE 50


>gi|253573515|ref|ZP_04850858.1| flagellar basal-body rod protein FlgB [Paenibacillus sp. oral
          taxon 786 str. D14]
 gi|251847043|gb|EES75048.1| flagellar basal-body rod protein FlgB [Paenibacillus sp. oral
          taxon 786 str. D14]
          Length = 135

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 25/67 (37%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69
           A  A   R   +A+N++N DT  F+   V F  ++ A  N     +    +   +    
Sbjct: 14 TAIQAANLRQGVIANNIANVDTPYFKRSSVSFESMLQAEMNGNMPALQGRRTDVRHFVIG 73

Query: 70 VGSFIST 76
            + +  
Sbjct: 74 PTTEVPE 80


>gi|16760051|ref|NP_455668.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|16764531|ref|NP_460146.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|29142178|ref|NP_805520.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|56413838|ref|YP_150913.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|62179692|ref|YP_216109.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|161614602|ref|YP_001588567.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167553037|ref|ZP_02346787.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|167994039|ref|ZP_02575131.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168234101|ref|ZP_02659159.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|168237257|ref|ZP_02662315.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|168244774|ref|ZP_02669706.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|168264032|ref|ZP_02686005.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|168467127|ref|ZP_02700969.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|168822618|ref|ZP_02834618.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|194446237|ref|YP_002040429.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194448226|ref|YP_002045174.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194469652|ref|ZP_03075636.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194737972|ref|YP_002114174.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197250491|ref|YP_002146868.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197264065|ref|ZP_03164139.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197362761|ref|YP_002142398.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|198244048|ref|YP_002215962.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|200389763|ref|ZP_03216374.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|204930701|ref|ZP_03221574.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|205353087|ref|YP_002226888.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|207857317|ref|YP_002243968.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|213161846|ref|ZP_03347556.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhi str. E00-7866]
 gi|213419883|ref|ZP_03352949.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhi str. E01-6750]
 gi|213424678|ref|ZP_03357443.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213582035|ref|ZP_03363861.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
 gi|213615928|ref|ZP_03371754.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
 gi|213648924|ref|ZP_03378977.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|213865507|ref|ZP_03387626.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|224584321|ref|YP_002638119.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|238911005|ref|ZP_04654842.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|289828582|ref|ZP_06546407.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-3139]
 gi|60392283|sp|P0A1I7|FLGC_SALTY RecName: Full=Flagellar basal-body rod protein flgC; AltName:
           Full=Putative proximal rod protein
 gi|60392284|sp|P0A1I8|FLGC_SALTI RecName: Full=Flagellar basal-body rod protein flgC; AltName:
           Full=Putative proximal rod protein
 gi|25298909|pir||AH0639 probable flagellar basal-body rod protein FlgC (proximal rod
           protein) STY1214 [imported] - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16419692|gb|AAL20105.1| flagellar biosynthesis protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|16502345|emb|CAD08299.1| putative flagellar basal-body rod protein FlgC (proximal rod
           protein) [Salmonella enterica subsp. enterica serovar
           Typhi]
 gi|29137808|gb|AAO69369.1| putative flagellar basal-body rod protein FlgC [Salmonella enterica
           subsp. enterica serovar Typhi str. Ty2]
 gi|56128095|gb|AAV77601.1| putative flagellar basal-body rod protein FlgC (proximal rod
           protein) [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|62127325|gb|AAX65028.1| flagellar biosynthesis, cell-proximal portion of basal-body rod
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|161363966|gb|ABX67734.1| hypothetical protein SPAB_02352 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194404900|gb|ACF65122.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194406530|gb|ACF66749.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194456016|gb|EDX44855.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194713474|gb|ACF92695.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|195630453|gb|EDX49079.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|197094238|emb|CAR59743.1| putative flagellar basal-body rod protein FlgC (proximal rod
           protein) [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
 gi|197214194|gb|ACH51591.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197242320|gb|EDY24940.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197289825|gb|EDY29186.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|197938564|gb|ACH75897.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|199602208|gb|EDZ00754.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|204320160|gb|EDZ05364.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|205272868|emb|CAR37797.1| putative flagellar basal-body rod protein FlgC (proximal rod
           protein) [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|205322443|gb|EDZ10282.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|205328049|gb|EDZ14813.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205331940|gb|EDZ18704.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|205336413|gb|EDZ23177.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|205341032|gb|EDZ27796.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|205347372|gb|EDZ34003.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|206709120|emb|CAR33453.1| putative flagellar basal-body rod protein FlgC (proximal rod
           protein) [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|224468848|gb|ACN46678.1| flagellar basal body rod protein [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|261246386|emb|CBG24195.1| putative flagellar basal-body rod protein FlgC (proximal rod
           protein) [Salmonella enterica subsp. enterica serovar
           Typhimurium str. D23580]
 gi|267992949|gb|ACY87834.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301157716|emb|CBW17208.1| putative flagellar basal-body rod protein FlgC (proximal rod
           protein) [Salmonella enterica subsp. enterica serovar
           Typhimurium str. SL1344]
 gi|312912162|dbj|BAJ36136.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|320086385|emb|CBY96158.1| Flagellar basal-body rod protein flgC [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|321223793|gb|EFX48856.1| Flagellar basal-body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
 gi|322616545|gb|EFY13454.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322620514|gb|EFY17378.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322622508|gb|EFY19353.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322629659|gb|EFY26434.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322632621|gb|EFY29367.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322636884|gb|EFY33587.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322641578|gb|EFY38216.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322644068|gb|EFY40614.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322653957|gb|EFY50280.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322658489|gb|EFY54751.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322663347|gb|EFY59549.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322670081|gb|EFY66221.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322674855|gb|EFY70946.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322676675|gb|EFY72742.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322682597|gb|EFY78616.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322686650|gb|EFY82629.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|322714162|gb|EFZ05733.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
 gi|323129445|gb|ADX16875.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
 gi|323195764|gb|EFZ80940.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323198344|gb|EFZ83448.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323203172|gb|EFZ88202.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323209175|gb|EFZ94112.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323209679|gb|EFZ94608.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323217865|gb|EGA02580.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323222153|gb|EGA06537.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323224925|gb|EGA09183.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323229667|gb|EGA13790.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323232892|gb|EGA16988.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323240627|gb|EGA24669.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323242941|gb|EGA26962.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323250258|gb|EGA34147.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323252633|gb|EGA36471.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323258839|gb|EGA42492.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323261028|gb|EGA44621.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323266937|gb|EGA50422.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323269978|gb|EGA53427.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
 gi|326623710|gb|EGE30055.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
 gi|326628167|gb|EGE34510.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
 gi|332988066|gb|AEF07049.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 134

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 6/43 (13%), Positives = 22/43 (51%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G+++  N + + EM   +  ++ + +   +++  +  ML+ + 
Sbjct: 89  GYVKMPNVDVVGEMVNTMSASRSYQANIEVLNTVKSMMLKTLT 131



 Score = 38.3 bits (87), Expect = 0.92,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 6/47 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42
             F+I  +A  A  +RL+  A N++N     G     +R  +V F 
Sbjct: 4  LNIFDIAGSALAAQSKRLNVAASNLANADSVTGPDGQPYRAKQVVFQ 50


>gi|312622116|ref|YP_004023729.1| flagellar hook-associated protein flgk [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312202583|gb|ADQ45910.1| flagellar hook-associated protein FlgK [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 525

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 19/192 (9%), Positives = 54/192 (28%), Gaps = 11/192 (5%)

Query: 51  DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTD 110
            I   ++ +    + L ++     + G  L+       +F     +     R  +     
Sbjct: 341 GIPYYLNRLNEFAQKLIEKFNELHTQGWSLNGQNTNINFFEPPVGQTFFYARYIKVSDAV 400

Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170
              L + +  Y    +      +    ++ N     +  +    + ++       SQG  
Sbjct: 401 MNDLNNIATTYDASSLPGGNDLVVDMLKLRNDNSVFKEGKFEDFLKSLISNLGVDSQG-- 458

Query: 171 RRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
                  + N      +  +      G       +   EM  +I     F +   +I+  
Sbjct: 459 ---AKNFAENQKVMVTQLDNRRQAVSG------VSIDEEMTNLIRYQHGFQASARMINAF 509

Query: 231 EKSMLEAIRNIA 242
           ++ +   +  + 
Sbjct: 510 DEMLDVIVNRLG 521



 Score = 42.5 bits (98), Expect = 0.047,   Method: Composition-based stats.
 Identities = 11/77 (14%), Positives = 21/77 (27%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
             I         + L   + N++N  T G+    +       + K         V  G 
Sbjct: 5  GLEIARTGIFVNRKGLEVTSHNVANASTPGYTRQVLNVKSNPPSAKVGFYSPKFQVGMGA 64

Query: 64 EYLSKEVGSFISTGTEL 80
          +  S E    +    + 
Sbjct: 65 DVQSLEQIRDMFLDIQY 81


>gi|254785369|ref|YP_003072798.1| flagellar basal body rod protein FlgC [Teredinibacter turnerae
           T7901]
 gi|237685992|gb|ACR13256.1| flagellar basal-body rod protein FlgC [Teredinibacter turnerae
           T7901]
          Length = 145

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 20/43 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N + EM  MI  ++ F     +++  ++ +   + 
Sbjct: 100 GYVYYPNVNVVEEMTNMISASRSFQVNVEVMNSAKQMVQRVLT 142


>gi|160939631|ref|ZP_02086979.1| hypothetical protein CLOBOL_04523 [Clostridium bolteae ATCC
           BAA-613]
 gi|158437422|gb|EDP15186.1| hypothetical protein CLOBOL_04523 [Clostridium bolteae ATCC
           BAA-613]
          Length = 144

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 22/42 (52%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N NS  EM  ++  ++ + +  T ++  +   L+A+
Sbjct: 99  GYVMMPNVNSAEEMVDLMAASRAYEANVTALNVAKSMALKAL 140



 Score = 39.5 bits (90), Expect = 0.38,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 6/46 (13%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43
          S NI  +A  A   R   +  N++N +T     G  ++  +V F E
Sbjct: 6  SLNITGSALTAERFRTDIIMQNLANQNTTRTAEGGPYKRKQVVFRE 51


>gi|291562058|emb|CBL40874.1| flagellar hook-associated protein FlgK [butyrate-producing
          bacterium SS3/4]
          Length = 557

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 31/85 (36%), Gaps = 2/85 (2%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
          + FN  L+A  A ++RL     N+SN +T G+   +++ S +     N +    +   + 
Sbjct: 7  SGFNTALSALQANQKRLDITGQNLSNMNTAGYTRQQLEASSLNYT--NPVSHYSNGNETA 64

Query: 63 KEYLSKEVGSFISTGTELDFALEGD 87
            +              LD      
Sbjct: 65 VGFGVSMDRVSQIRDPYLDIQYRSQ 89



 Score = 36.4 bits (82), Expect = 3.5,   Method: Composition-based stats.
 Identities = 18/137 (13%), Positives = 36/137 (26%)

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
              D  + ++A          S  I I              I+         G    D  
Sbjct: 421 STDDSTTGITAGNIGISKGWTSGTIHISTDGTNRTDTILDMIAAMKDTKKLNGKTFADYM 480

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
                +  S  S N            +++      S  +   E   M+     +N+ + L
Sbjct: 481 NNLSTQLASDSSSNQTALKTGTTVLNSIQDSRDSLSGVSLDEEATNMMAYVSAYNAASRL 540

Query: 227 IDENEKSMLEAIRNIAS 243
           +   ++ +   I N  +
Sbjct: 541 MTALDEVLNTLISNTGA 557


>gi|152980444|ref|YP_001353109.1| FlgC flagellar basal body rod protein [Janthinobacterium sp.
           Marseille]
 gi|151280521|gb|ABR88931.1| FlgC flagellar basal body rod protein [Janthinobacterium sp.
           Marseille]
          Length = 135

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 20/43 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G +   N N + EM  MI  ++ + +    ++  +  +L+ + 
Sbjct: 90  GHVAMPNVNVVEEMVNMISASRSYQTNVETMNTAKTMLLKTLT 132



 Score = 41.0 bits (94), Expect = 0.15,   Method: Composition-based stats.
 Identities = 17/102 (16%), Positives = 31/102 (30%), Gaps = 8/102 (7%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSE--VVGAIKNDIDQ 54
             FN+  +A  A  QRL+ V+ N++N   T       +R  +V+F    + G   +   +
Sbjct: 5   NIFNVSGSAMSAQSQRLNVVSSNIANAESTTSADGKTYRAKQVEFQAQQMKGGATSTGVR 64

Query: 55  KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR 96
               V               +       A+            
Sbjct: 65  VNRVVEDTSPLKMVFDPKHPNADETGHVAMPNVNVVEEMVNM 106


>gi|28211376|ref|NP_782320.1| flagellar hook-associated protein 1 [Clostridium tetani E88]
 gi|28203817|gb|AAO36257.1| flagellar hook-associated protein 1 [Clostridium tetani E88]
          Length = 579

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 7/39 (17%), Positives = 19/39 (48%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
           ++G +   A ++ +   + NM+N +T G+   + +   
Sbjct: 8  LHVGKSGIFANQKAIDVTSHNMANANTEGYSRQRAELQT 46



 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 5/41 (12%), Positives = 14/41 (34%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
            S  +   E   +I     + +   +I   ++ +   I  +
Sbjct: 537 ASGVSIDEETTNLIQFQHAYQANAKIISTVDELLDVVINGL 577


>gi|258625228|ref|ZP_05720140.1| putative flagellar hook-associated protein 1 [Vibrio mimicus
          VM603]
 gi|258582475|gb|EEW07312.1| putative flagellar hook-associated protein 1 [Vibrio mimicus
          VM603]
          Length = 457

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 18/43 (41%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44
              NI L+   A    L   A N++N +T GF   +   + V
Sbjct: 1  MNIVNIALSGLNANRVALDVTAQNVANINTPGFSRQQAIMTSV 43



 Score = 36.0 bits (81), Expect = 4.6,   Method: Composition-based stats.
 Identities = 11/92 (11%), Positives = 30/92 (32%), Gaps = 5/92 (5%)

Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLED----SNANSM 207
            K +A  G  ++ ++  F                 +  +  ++ +  +E     S  NS 
Sbjct: 365 NKPVAITGFGNISINDAFTSMVGETAIKARQAD-SDYQTRASMNQQAIESRNNVSAVNSD 423

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            E   ++     +N+   +I    +     ++
Sbjct: 424 EEAANLMTFANAYNANMKVISTANQLFDSVLQ 455


>gi|331269279|ref|YP_004395771.1| flagellar hook-associated protein 1 [Clostridium botulinum
          BKT015925]
 gi|329125829|gb|AEB75774.1| flagellar hook-associated protein 1 [Clostridium botulinum
          BKT015925]
          Length = 647

 Score = 52.2 bits (123), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 12/90 (13%), Positives = 32/90 (35%), Gaps = 4/90 (4%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV----VGAIKNDIDQKISF 58
          ++ N+G     A +  L   + N++N++T G+   +          + A+ N +      
Sbjct: 6  STLNVGKRGLYAQQGALDVTSHNIANSNTEGYTRQRALMETTRPFGMPAMDNQVGPGQIG 65

Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDA 88
                 + +   +F+      + +  G  
Sbjct: 66 TGVEISKIQRVRDTFMDYQVRRETSTLGQY 95



 Score = 46.0 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 5/40 (12%), Positives = 15/40 (37%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           S  +   EM  ++     + +   +I   ++ +   I  +
Sbjct: 606 SGVSLNEEMANIVQYQHAYQANAKIIATTDQLLDVVINGL 645


>gi|268589984|ref|ZP_06124205.1| flagellar basal-body rod protein FlgC [Providencia rettgeri DSM
           1131]
 gi|291314702|gb|EFE55155.1| flagellar basal-body rod protein FlgC [Providencia rettgeri DSM
           1131]
          Length = 134

 Score = 52.2 bits (123), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 7/61 (11%), Positives = 26/61 (42%)

Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           P  P    +       ++G+++  N + + EM   I  ++ + +   +++  +  + + +
Sbjct: 71  PTPPRMEYKPGHPSADEKGYVQMPNVDMVGEMINTISASRSYQANLEVMNTAKTLLQKTL 130

Query: 239 R 239
            
Sbjct: 131 T 131



 Score = 37.5 bits (85), Expect = 1.5,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 41/121 (33%), Gaps = 6/121 (4%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQK 55
            + F+I  +A  A  QRL+  A NM+N +++       +R  +V F             +
Sbjct: 4   LSIFDISASALTAQSQRLNVSASNMANAESIAGPDGQPYRAKQVVFQMAPQGRHEVGGVR 63

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115
           +S +         E      +  E  +    +     E    I  +R  +  +    +  
Sbjct: 64  VSELIEDPTPPRMEYKPGHPSADEKGYVQMPNVDMVGEMINTISASRSYQANLEVMNTAK 123

Query: 116 S 116
           +
Sbjct: 124 T 124


>gi|258622494|ref|ZP_05717516.1| putative flagellar hook-associated protein 1 [Vibrio mimicus
          VM573]
 gi|258585194|gb|EEW09921.1| putative flagellar hook-associated protein 1 [Vibrio mimicus
          VM573]
          Length = 457

 Score = 52.2 bits (123), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 18/43 (41%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44
              NI L+   A    L   A N++N +T GF   +   + V
Sbjct: 1  MNIVNIALSGLNANRVALDVTAQNVANINTPGFSRQQAIMTSV 43



 Score = 36.4 bits (82), Expect = 3.3,   Method: Composition-based stats.
 Identities = 7/57 (12%), Positives = 22/57 (38%), Gaps = 4/57 (7%)

Query: 187 EDLSGVTVKRGFLED----SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +  +  ++ +  +E     S  NS  E   ++  +  +N+   +I    +     ++
Sbjct: 399 DYQTRASMNQQAIESRDNVSAVNSDEEAANLMTFSNAYNANMKVISTANQLFDSVLQ 455


>gi|238764390|ref|ZP_04625340.1| Flagellar basal-body rod protein flgC [Yersinia kristensenii ATCC
           33638]
 gi|238697416|gb|EEP90183.1| Flagellar basal-body rod protein flgC [Yersinia kristensenii ATCC
           33638]
          Length = 134

 Score = 52.2 bits (123), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 20/43 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N +   EM   I  ++ + +   +++  +  ML+ + 
Sbjct: 89  GYVRMPNVDITGEMVNTISASRSYQANVEVLNTTKSLMLKTLT 131



 Score = 38.7 bits (88), Expect = 0.72,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 26/68 (38%), Gaps = 6/68 (8%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSEVVGAIKNDIDQK 55
             F+I  +A  A  QR++  A NM+N     G     +R  +V F       +     +
Sbjct: 4  LNIFDIAGSALSAQSQRMNVSASNMANADSVTGPDGQPYRAKQVVFQVAAQPGQETGGVR 63

Query: 56 ISFVASGK 63
          ++ V    
Sbjct: 64 VAQVIDDP 71


>gi|284989567|ref|YP_003408121.1| flagellar hook-associated protein FlgK [Geodermatophilus obscurus
          DSM 43160]
 gi|284062812|gb|ADB73750.1| flagellar hook-associated protein FlgK [Geodermatophilus obscurus
          DSM 43160]
          Length = 482

 Score = 52.2 bits (123), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 22/57 (38%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
            N    A  A ++ L     N++N +T G+   +V+   + G     I    S V 
Sbjct: 7  GLNTARTALWASQRGLDVTGQNIANVNTDGYSRQRVELRAMGGTAVPAIHSVSSPVG 63



 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 6/41 (14%), Positives = 16/41 (39%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   EM  M+     +++   ++   ++++   I    
Sbjct: 438 SGVNLDEEMTNMLSFQHAYSAAARMVTAIDEALDTLINRTG 478


>gi|317492422|ref|ZP_07950851.1| flagellar hook-associated protein FlgK [Enterobacteriaceae
          bacterium 9_2_54FAA]
 gi|316919761|gb|EFV41091.1| flagellar hook-associated protein FlgK [Enterobacteriaceae
          bacterium 9_2_54FAA]
          Length = 561

 Score = 52.2 bits (123), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 29/83 (34%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M    N  ++   A +  LS  ++N+SN  T G+    V F++  G   +          
Sbjct: 1  MANLINSAMSGLSAAQTALSVTSNNLSNVYTQGYNRQTVSFAQSGGISTSTGFIGNGVNV 60

Query: 61 SGKEYLSKEVGSFISTGTELDFA 83
          SG                + D+A
Sbjct: 61 SGINREYNSFIVGQLRQGQSDYA 83



 Score = 35.2 bits (79), Expect = 8.7,   Method: Composition-based stats.
 Identities = 8/73 (10%), Positives = 20/73 (27%)

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
            G V    +  +     +  +      + +     S  N   E G ++   Q + +   +
Sbjct: 487 AGLVGTVGNQTNSAKVDSTAQGNVVKQLTQQQQSVSGVNLDEEYGNLMRFQQYYQANAQV 546

Query: 227 IDENEKSMLEAIR 239
           I          + 
Sbjct: 547 IQTATTLFSALLN 559


>gi|313901523|ref|ZP_07834970.1| flagellar basal-body rod protein FlgC [Thermaerobacter
          subterraneus DSM 13965]
 gi|313468218|gb|EFR63685.1| flagellar basal-body rod protein FlgC [Thermaerobacter
          subterraneus DSM 13965]
          Length = 188

 Score = 52.2 bits (123), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 6/49 (12%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43
          M ++F+I  +   A   RL  +A N++N D+     G  +R +   F E
Sbjct: 5  MFSTFDIAASGMTAQRLRLDLIASNLANVDSTRTPQGGPYRRLVPVFEE 53



 Score = 45.2 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 5/30 (16%), Positives = 15/30 (50%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
           G++   N + + EM  ++  T+ + +   +
Sbjct: 142 GYVAYPNVDPLAEMVNLLAATRAYEANVAV 171


>gi|319790422|ref|YP_004152055.1| flagellar basal-body rod protein FlgC [Thermovibrio ammonificans
           HB-1]
 gi|317114924|gb|ADU97414.1| flagellar basal-body rod protein FlgC [Thermovibrio ammonificans
           HB-1]
          Length = 135

 Score = 52.2 bits (123), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 8/47 (17%), Positives = 21/47 (44%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           G++   N + + EM  MI   + + +  T  +  +  ++  I  + +
Sbjct: 89  GYVTLPNVDPLREMVDMISAMRSYEANLTAFNTRKNMIVNTIDILKA 135



 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 27/82 (32%), Gaps = 6/82 (7%)

Query: 1  MQ-TSFNIGLAAQLALEQRLSTVADNMSNTDTV---G--FRTIKVKFSEVVGAIKNDIDQ 54
          M      + +   LA   R+   A N++N ++V   G  +R     F  V+  +      
Sbjct: 1  MIFKGLEVSVTGMLAQRVRMDVAASNLANANSVDDNGQPYRRRVPIFEAVLDEVNGVKTY 60

Query: 55 KISFVASGKEYLSKEVGSFIST 76
          ++      ++          S 
Sbjct: 61 RVKVKKIVEDPSPFRKIYDPSN 82


>gi|163803175|ref|ZP_02197058.1| putative flagellar hook-associated protein [Vibrio sp. AND4]
 gi|159173075|gb|EDP57908.1| putative flagellar hook-associated protein [Vibrio sp. AND4]
          Length = 457

 Score = 52.2 bits (123), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 28/99 (28%), Gaps = 1/99 (1%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
               NI L+   A    L   A N++N +T G+   +   +  VG  K +       V  
Sbjct: 1   MNLVNIALSGLNANRVALDVTAQNVANINTPGYSRQQALMAS-VGDGKYNKLSPGMGVEV 59

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL 100
                  +      T +    A     +          L
Sbjct: 60  TSIRRVTDQFLVKQTWSTNSLAAYSAGYVTAMDQLENTL 98


>gi|52841457|ref|YP_095256.1| flagellar hook-associated protein FlgK [Legionella pneumophila
           subsp. pneumophila str. Philadelphia 1]
 gi|52628568|gb|AAU27309.1| flagellar hook associated protein 1 FlgK [Legionella pneumophila
           subsp. pneumophila str. Philadelphia 1]
          Length = 649

 Score = 52.2 bits (123), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 18/132 (13%), Positives = 49/132 (37%), Gaps = 1/132 (0%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
            +  NI  +   A ++ L    +N++N  T G+    ++F+ +  + +       + V+ 
Sbjct: 1   MSILNIAYSGLNAFQRALDVTGNNIANFKTRGYSRQSIQFTPI-TSNRYAGSYIGAGVSV 59

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
              Y + +  +     + L +  + DA++        +L++DG        +   + G+ 
Sbjct: 60  ASIYRNVDQFANAQVRSTLSYRTQYDAFYNQAIQIDKLLSQDGSSISVPLQTFFDSIGQL 119

Query: 122 PVLDMASVPIQI 133
                      +
Sbjct: 120 NSTPDNIATRGV 131


>gi|289548424|ref|YP_003473412.1| flagellar basal-body rod protein FlgC [Thermocrinis albus DSM
           14484]
 gi|289182041|gb|ADC89285.1| flagellar basal-body rod protein FlgC [Thermocrinis albus DSM
           14484]
          Length = 137

 Score = 52.2 bits (123), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 7/42 (16%), Positives = 18/42 (42%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           GF+   N +   EM  M+   + + +  T  +  ++ +   +
Sbjct: 92  GFVRLPNVDVTAEMVDMLSALRSYEANLTAFNATKEIVQRTL 133



 Score = 38.3 bits (87), Expect = 0.99,   Method: Composition-based stats.
 Identities = 5/22 (22%), Positives = 12/22 (54%)

Query: 7  IGLAAQLALEQRLSTVADNMSN 28
          +  +   A   R++ +A N++N
Sbjct: 10 VSASGMYAQRVRINVIASNLAN 31


>gi|167628881|ref|YP_001679380.1| flagellar hook-associated protein flgk, putative [Heliobacterium
           modesticaldum Ice1]
 gi|167591621|gb|ABZ83369.1| flagellar hook-associated protein flgk, putative [Heliobacterium
           modesticaldum Ice1]
          Length = 736

 Score = 52.2 bits (123), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 19/41 (46%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S+ +   EM  MI   Q +N+   +++  ++ +   I  + 
Sbjct: 692 SSVSLDEEMTNMIRYQQAYNASARMVNVMDEMLDTIIHRLG 732



 Score = 39.5 bits (90), Expect = 0.38,   Method: Composition-based stats.
 Identities = 7/37 (18%), Positives = 12/37 (32%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
             I      A    L     N++N +T G+    + 
Sbjct: 7  GLEIAKRGINANRIGLDVTGHNITNVNTEGYSRQTIV 43


>gi|167623359|ref|YP_001673653.1| flagellar basal body rod protein FlgC [Shewanella halifaxensis
           HAW-EB4]
 gi|167353381|gb|ABZ75994.1| flagellar basal-body rod protein FlgC [Shewanella halifaxensis
           HAW-EB4]
          Length = 138

 Score = 52.2 bits (123), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 20/43 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           GF+   N N M EM  MI  ++ +     + +  +  + + +R
Sbjct: 93  GFIYKPNVNVMEEMANMISASRSYQMNVQVTEAAKSMLQQTLR 135



 Score = 37.9 bits (86), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 27/84 (32%), Gaps = 6/84 (7%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56
            FN+  +   A   RL+T A N++N D+V       +R     F   +   +       
Sbjct: 5  NIFNVAGSGMSAQSVRLNTTASNIANADSVSSSVGETYRARHPIFEAEMSKAQQHQSASA 64

Query: 57 SFVASGKEYLSKEVGSFISTGTEL 80
          S    G       +    S    +
Sbjct: 65 SVAVKGIVESDLPLNKEFSPDHPM 88


>gi|194365674|ref|YP_002028284.1| flagellar hook-associated protein FlgK [Stenotrophomonas
          maltophilia R551-3]
 gi|194348478|gb|ACF51601.1| flagellar hook-associated protein FlgK [Stenotrophomonas
          maltophilia R551-3]
          Length = 626

 Score = 52.2 bits (123), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 32/83 (38%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M +  + G  A LA ++ L+T + N++N +T G+   KV F+                  
Sbjct: 1  MSSVLSTGTGALLAFQRALATTSHNVANLNTPGYSRQKVNFATADPQNYGYGTVGNGTRI 60

Query: 61 SGKEYLSKEVGSFISTGTELDFA 83
          +     + ++       +  + A
Sbjct: 61 TDIRRTADQLAISRLLDSSGELA 83



 Score = 42.2 bits (97), Expect = 0.070,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 15/39 (38%)

Query: 200 EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           E S  N   E   M+ L Q + + + LI   +      +
Sbjct: 583 EVSGVNLDEEAADMLRLQQAYQAASQLISTADSMFQTIL 621


>gi|312127297|ref|YP_003992171.1| flagellar hook-associated protein flgk [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311777316|gb|ADQ06802.1| flagellar hook-associated protein FlgK [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 525

 Score = 52.2 bits (123), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 6/41 (14%), Positives = 16/41 (39%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  +   EM  +I     F +   +I+  ++ +   +  + 
Sbjct: 481 SGVSIDEEMTNLIKYQHGFQASARMINAFDEMLDVLVNRLG 521



 Score = 42.5 bits (98), Expect = 0.046,   Method: Composition-based stats.
 Identities = 11/77 (14%), Positives = 21/77 (27%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
             I         + L   + N++N  T G+    +       + K         V  G 
Sbjct: 5  GLEIARTGIFVNRKGLEVTSHNVANASTPGYTRQVLNVKSNPPSAKVGFYSPKFQVGMGA 64

Query: 64 EYLSKEVGSFISTGTEL 80
          +  S E    +    + 
Sbjct: 65 DVQSLEQIRDMFLDIQY 81


>gi|207108270|ref|ZP_03242432.1| flagellar basal-body rod protein FlgG [Helicobacter pylori
           HPKX_438_CA4C1]
          Length = 49

 Score = 52.2 bits (123), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 24/47 (51%), Gaps = 1/47 (2%)

Query: 198 FLEDSNANSMYEMGQMIHLTQKFNSITTLIDE-NEKSMLEAIRNIAS 243
            LE SN N++ EM  +I + +  +  + ++    +    EAI  +A+
Sbjct: 1   MLEKSNVNAVREMSALIEINRFLDMYSKVLKTHQDDMNAEAINKLAT 47


>gi|91225871|ref|ZP_01260840.1| flagellar basal-body rod protein C [Vibrio alginolyticus 12G01]
 gi|91189521|gb|EAS75797.1| flagellar basal-body rod protein C [Vibrio alginolyticus 12G01]
          Length = 137

 Score = 52.2 bits (123), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 23/43 (53%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N M EM  MI  ++ + +   + D +++ +L  ++
Sbjct: 92  GYIYKPNVNVMEEMANMISASRAYQTNVQVADSSKQMLLRTLQ 134



 Score = 37.9 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/81 (18%), Positives = 26/81 (32%), Gaps = 6/81 (7%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56
            FN+  +A  A   RL+T + N++N D+V       ++     F   +       D   
Sbjct: 5  NVFNVTGSAMSAESVRLNTTSSNLANADSVSSSAKDTYKARHAVFGAELSNAMRGGDTVP 64

Query: 57 SFVASGKEYLSKEVGSFISTG 77
            V    E        +    
Sbjct: 65 VKVMGIVESDKPLNAEYNPDH 85


>gi|317121813|ref|YP_004101816.1| flagellar basal-body rod protein FlgC [Thermaerobacter
          marianensis DSM 12885]
 gi|315591793|gb|ADU51089.1| flagellar basal-body rod protein FlgC [Thermaerobacter
          marianensis DSM 12885]
          Length = 179

 Score = 52.2 bits (123), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 27/67 (40%), Gaps = 6/67 (8%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDIDQKI 56
           +F+I  +   A   RL  +A N++N DT     G  +R +   F E V      + ++ 
Sbjct: 7  NTFDIAASGMTAQRLRLDLIASNLANVDTTRTAQGGPYRRLVPVFQERVRPFAEVLRERA 66

Query: 57 SFVASGK 63
          +      
Sbjct: 67 AGFGGMS 73



 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 8/46 (17%), Positives = 19/46 (41%), Gaps = 1/46 (2%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G++   N + + EM  ++  T+ + +   +        L A+  I 
Sbjct: 133 GYVAYPNVDPLMEMVNLLAATRAYEANVAVFSAARTLALRAL-EIG 177


>gi|302343763|ref|YP_003808292.1| flagellar hook-associated protein FlgK [Desulfarculus baarsii DSM
           2075]
 gi|301640376|gb|ADK85698.1| flagellar hook-associated protein FlgK [Desulfarculus baarsii DSM
           2075]
          Length = 574

 Score = 52.2 bits (123), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 7/38 (18%), Positives = 16/38 (42%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            S  +   EM +MI   + +     +I  +++ +   I
Sbjct: 533 MSGVSLDEEMVRMIQFQRSYQMAAQMIQVSDELLQTLI 570



 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 11/83 (13%), Positives = 25/83 (30%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
          +  +I   A  A   +L  V+ N++N +T G+       +       +          + 
Sbjct: 6  SMMDISRWALNASVDQLDVVSHNVANVNTPGYSRQVAVLATRNPQYSSKGYFGNGVQTTT 65

Query: 63 KEYLSKEVGSFISTGTELDFALE 85
                ++     T    D +  
Sbjct: 66 VMQYVDKLLLGRLTANTSDTSYY 88


>gi|224437870|ref|ZP_03658817.1| flagellar basal body rod protein FlgC [Helicobacter cinaedi CCUG
           18818]
 gi|313144319|ref|ZP_07806512.1| flagellar basal body rod protein FlgC [Helicobacter cinaedi CCUG
           18818]
 gi|313129350|gb|EFR46967.1| flagellar basal body rod protein FlgC [Helicobacter cinaedi CCUG
           18818]
          Length = 163

 Score = 52.2 bits (123), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 17/43 (39%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N + EM  +I  T+ + +        +     AI 
Sbjct: 117 GYVAYPNVNPVVEMADLIEATRAYQANVAAFQSAKNMASNAIT 159



 Score = 42.5 bits (98), Expect = 0.047,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 6/49 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44
           +SF+I      A   R++T++ N++N +T     G  +R  +V F   
Sbjct: 3  LSSFDISGYGLSAQRVRVNTISSNIANANTTRTDEGGPYRRREVVFRAF 51


>gi|212634346|ref|YP_002310871.1| flagellar basal body rod protein FlgC [Shewanella piezotolerans
           WP3]
 gi|212555830|gb|ACJ28284.1| Flagellar basal-body rod protein FlgC [Shewanella piezotolerans
           WP3]
          Length = 138

 Score = 52.2 bits (123), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 20/43 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           GF+   N N M EM  MI  ++ +     + D  +  + + +R
Sbjct: 93  GFIYKPNVNVMEEMANMISASRSYQMNVQVTDAAKSMLQQTLR 135



 Score = 36.4 bits (82), Expect = 3.2,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 27/84 (32%), Gaps = 6/84 (7%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56
            FN+  +   A   RL+T A N++N D V       +R     F   +   +       
Sbjct: 5  NIFNVAGSGMSAQSVRLNTTASNIANADAVSSSAGETYRARHPIFEAEMSKAQQHQSASQ 64

Query: 57 SFVASGKEYLSKEVGSFISTGTEL 80
          S    G       +    S G  +
Sbjct: 65 SVAVKGIVESDLPLNKEFSPGHPM 88


>gi|153951079|ref|YP_001398445.1| flagellar basal body rod protein FlgC [Campylobacter jejuni subsp.
           doylei 269.97]
 gi|152938525|gb|ABS43266.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           doylei 269.97]
          Length = 164

 Score = 52.2 bits (123), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 19/46 (41%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G++   N N + EM  +I  T+ + +  +     +     AI  + 
Sbjct: 118 GYVAYPNVNPVIEMADLIEATRAYQANVSAFTSAKTIAQSAIDLLR 163



 Score = 42.9 bits (99), Expect = 0.036,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 18/39 (46%), Gaps = 6/39 (15%)

Query: 11 AQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43
             A   R+S ++ N++N +T     G  +R  +V F  
Sbjct: 13 GLSAQRFRMSVISSNIANVNTTRTAEGGPYRRREVIFKA 51


>gi|153834459|ref|ZP_01987126.1| flagellar basal-body rod protein FlgC [Vibrio harveyi HY01]
 gi|163802605|ref|ZP_02196497.1| flagellar basal-body rod protein C [Vibrio sp. AND4]
 gi|148869155|gb|EDL68187.1| flagellar basal-body rod protein FlgC [Vibrio harveyi HY01]
 gi|159173688|gb|EDP58507.1| flagellar basal-body rod protein C [Vibrio sp. AND4]
          Length = 137

 Score = 52.2 bits (123), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 23/43 (53%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N M EM  MI  ++ + +   + D +++ +L  ++
Sbjct: 92  GYIYKPNVNVMEEMANMISASRAYQTNVQVADSSKQMLLRTLQ 134



 Score = 37.9 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/81 (18%), Positives = 26/81 (32%), Gaps = 6/81 (7%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56
            FN+  +A  A   RL+T + N++N D+V       ++     F   +       D   
Sbjct: 5  NVFNVTGSAMSAESVRLNTTSSNLANADSVSSSAKDTYKARHAVFGAELSNAMRGGDTVP 64

Query: 57 SFVASGKEYLSKEVGSFISTG 77
            V    E        +    
Sbjct: 65 VKVMGIVESDKPLNAEYNPDH 85


>gi|144245|gb|AAA23042.1| hook protein [Caulobacter vibrioides]
          Length = 52

 Score = 52.2 bits (123), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 27/46 (58%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA 47
           ++   G++  +A    L+ ++DN++N +TVGF+     FS +V +
Sbjct: 4  NSAMLAGVSGLIANSSALAAISDNIANVNTVGFKRSTSNFSTLVTS 49


>gi|86151838|ref|ZP_01070052.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni 260.94]
 gi|148925898|ref|ZP_01809585.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni CG8486]
 gi|157414808|ref|YP_001482064.1| flagellar basal body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|205355383|ref|ZP_03222154.1| flagellar basaL body rod protein [Campylobacter jejuni subsp.
           jejuni CG8421]
 gi|283954185|ref|ZP_06371710.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni 414]
 gi|283955949|ref|ZP_06373439.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni 1336]
 gi|315124050|ref|YP_004066054.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni ICDCCJ07001]
 gi|85841467|gb|EAQ58715.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni 260.94]
 gi|145844884|gb|EDK21988.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni CG8486]
 gi|157385772|gb|ABV52087.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|205346617|gb|EDZ33249.1| flagellar basaL body rod protein [Campylobacter jejuni subsp.
           jejuni CG8421]
 gi|283792609|gb|EFC31388.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni 1336]
 gi|283794464|gb|EFC33208.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni 414]
 gi|284925790|gb|ADC28142.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni IA3902]
 gi|315017772|gb|ADT65865.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni ICDCCJ07001]
 gi|315931721|gb|EFV10676.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni 327]
          Length = 164

 Score = 51.8 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 19/46 (41%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G++   N N + EM  +I  T+ + +  +     +     AI  + 
Sbjct: 118 GYVAYPNVNPVIEMADLIEATRAYQANVSAFTSAKTIAQSAIDLLR 163



 Score = 43.3 bits (100), Expect = 0.031,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 18/39 (46%), Gaps = 6/39 (15%)

Query: 11 AQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43
             A   R++ ++ N++N +T     G  +R  +V F  
Sbjct: 13 GLSAQRFRMNVISSNIANANTTRTAEGGPYRRREVIFKA 51


>gi|323703167|ref|ZP_08114820.1| flagellar basal-body rod protein FlgC [Desulfotomaculum nigrificans
           DSM 574]
 gi|323531826|gb|EGB21712.1| flagellar basal-body rod protein FlgC [Desulfotomaculum nigrificans
           DSM 574]
          Length = 145

 Score = 51.8 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 27/60 (45%)

Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           P  P    E  + +  + G +   N N + EM  MI  ++ + +  T ++  +   L+A+
Sbjct: 81  PAPPRIVHEPDNPLADQDGNVAYPNINIVNEMVDMITASRAYEANVTALNAAKSMALKAL 140



 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/88 (14%), Positives = 29/88 (32%), Gaps = 9/88 (10%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVG---------FRTIKVKFSEVVGAIKNDIDQ 54
          SF I  +   +   RL  +A+N++N +T G         +R     F+E +         
Sbjct: 6  SFAISASGMTSERLRLDLIANNVANMNTAGRPNDPNNPVYRRRVPVFAEQLRQTMAANST 65

Query: 55 KISFVASGKEYLSKEVGSFISTGTELDF 82
          +        + + ++           + 
Sbjct: 66 EPRGAGVRVKAIVEDPAPPRIVHEPDNP 93


>gi|212640402|ref|YP_002316922.1| flagellar hook-associated protein FlgK [Anoxybacillus
          flavithermus WK1]
 gi|212561882|gb|ACJ34937.1| Flagellar hook-associated protein [Anoxybacillus flavithermus
          WK1]
          Length = 513

 Score = 51.8 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 24/72 (33%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
             A +Q L     N++N +T G+   +V F +         ++ +     G       V
Sbjct: 14 GMTAQQQALYVTGHNIANANTPGYSRQRVNFEQTPPYPFASKNRPVMPGQMGTGVEGGTV 73

Query: 71 GSFISTGTELDF 82
                  ++ +
Sbjct: 74 QRMREQFLDVQY 85



 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 12/80 (15%), Positives = 29/80 (36%), Gaps = 4/80 (5%)

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLED----SNANSMYEMGQMIHLTQKFNS 222
           Q F       ++ N         +   +++   E     S+ +   EM  M+     +N+
Sbjct: 430 QNFYESLIGQMAVNAQEAKRLSENSEVLRQSVDERRMAVSSVSLDEEMMNMMKFQHAYNA 489

Query: 223 ITTLIDENEKSMLEAIRNIA 242
              +I   ++ + + I N+ 
Sbjct: 490 SARMITMIDQMLDKIINNMG 509


>gi|313497768|gb|ADR59134.1| FlgK [Pseudomonas putida BIRD-1]
          Length = 680

 Score = 51.8 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  +IGL+   A +  LS  ++N++N  T G+   +   +          
Sbjct: 1  MSSLISIGLSGLSASQAALSVTSNNIANAATSGYSRQQTVQAAGPSHNIGAG 52


>gi|146311244|ref|YP_001176318.1| flagellar basal body rod protein FlgC [Enterobacter sp. 638]
 gi|145318120|gb|ABP60267.1| flagellar basal-body rod protein FlgC [Enterobacter sp. 638]
          Length = 134

 Score = 51.8 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 6/43 (13%), Positives = 22/43 (51%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G+++  N + + EM   +  ++ + +   +++  +  ML+ + 
Sbjct: 89  GYVKMPNVDVVGEMVNTMSASRSYQANVEVLNTVKSMMLKTLT 131



 Score = 37.5 bits (85), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 6/47 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42
             F+I  +A  A  QRL+  A NM+N     G     +R  +V F 
Sbjct: 4  LNIFDIAGSALTAQSQRLNVAASNMANADSVTGPDGQPYRAKQVVFQ 50


>gi|262166284|ref|ZP_06034021.1| flagellar basal-body rod protein FlgC [Vibrio mimicus VM223]
 gi|262026000|gb|EEY44668.1| flagellar basal-body rod protein FlgC [Vibrio mimicus VM223]
          Length = 71

 Score = 51.8 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 23/43 (53%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N M EM  MI  ++ + +   + D +++ +L  ++
Sbjct: 26  GYIYKPNVNVMEEMANMISASRSYQTNVQVADASKQMLLRTLQ 68


>gi|239628951|ref|ZP_04671982.1| flagellar basal-body rod protein FlgC [Clostridiales bacterium
           1_7_47_FAA]
 gi|239519097|gb|EEQ58963.1| flagellar basal-body rod protein FlgC [Clostridiales bacterium
           1_7_47FAA]
          Length = 144

 Score = 51.8 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 22/42 (52%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N NS  EM  ++  ++ + +  T ++  +   L+A+
Sbjct: 99  GYVMMPNVNSAEEMVDLMAASRAYEANVTALNIAKSMALKAL 140



 Score = 38.3 bits (87), Expect = 0.85,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 6/46 (13%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43
          S NI  +A  A   R   +  N++N +T     G  +R  +V F E
Sbjct: 6  SLNITGSALTAERFRTDIIMQNLANQNTTRTADGGPYRRKQVVFRE 51


>gi|134095099|ref|YP_001100174.1| basal-body rod protein [Herminiimonas arsenicoxydans]
 gi|133739002|emb|CAL62050.1| Flagellar basal-body rod protein FlgC (Putative proximal rod
           protein) [Herminiimonas arsenicoxydans]
          Length = 134

 Score = 51.8 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 20/43 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G +   N N + EM  MI  ++ + +    ++  +  +L+ + 
Sbjct: 89  GHVAMPNVNVVEEMVNMISASRSYQTNVETMNAAKTMLLKTLT 131



 Score = 45.2 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 39/120 (32%), Gaps = 6/120 (5%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSEVVGAIKNDIDQKI 56
             FN+  +A  A  QRL+ V+ N++N   T       +R  +V+F  V  A       K+
Sbjct: 5   NIFNVAGSAMSAQSQRLNVVSSNIANAESTTSADGKTYRAKQVEFQSVPMAGATSTGVKV 64

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVS 116
             V      L            E       +     E    I  +R  +  V    +  +
Sbjct: 65  RQVVEDASPLKMVFDPKHPNADETGHVAMPNVNVVEEMVNMISASRSYQTNVETMNAAKT 124


>gi|261840251|gb|ACY00017.1| flagellar basal body rod protein FlgC [Helicobacter pylori 52]
 gi|332674370|gb|AEE71187.1| flagellar basal-body rod protein FlgC [Helicobacter pylori 83]
          Length = 161

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 19/44 (43%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            +G++   N N++ EM  ++  T+ + +        +     AI
Sbjct: 113 AQGYVAYPNVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAI 156



 Score = 39.5 bits (90), Expect = 0.40,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 6/49 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44
           +SF+I      A   R + ++ N++N +T     G  +R  +  F   
Sbjct: 3  LSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFKAF 51


>gi|163750564|ref|ZP_02157802.1| hypothetical flagellar hook-associated protein [Shewanella
          benthica KT99]
 gi|161329719|gb|EDQ00708.1| hypothetical flagellar hook-associated protein [Shewanella
          benthica KT99]
          Length = 637

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 23/51 (45%), Gaps = 1/51 (1%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51
          M    NI     LA + +L+  ++N++N +T G+     + S +      D
Sbjct: 3  MD-LLNIARTGVLASQAQLAVTSNNIANVNTQGYHRQVAEQSSLESQRLGD 52



 Score = 40.6 bits (93), Expect = 0.19,   Method: Composition-based stats.
 Identities = 4/41 (9%), Positives = 13/41 (31%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E   ++   Q + +   ++    +     +  + 
Sbjct: 597 SGVNLDEEAANLMRFQQAYQASARIMTTANEIFETLLNAVR 637


>gi|108563932|ref|YP_628248.1| flagellar basal body rod protein FlgC [Helicobacter pylori HPAG1]
 gi|188528350|ref|YP_001911037.1| flagellar basal body rod protein FlgC [Helicobacter pylori Shi470]
 gi|217033829|ref|ZP_03439254.1| hypothetical protein HP9810_877g33 [Helicobacter pylori 98-10]
 gi|107837705|gb|ABF85574.1| flagellar basal-body rod protein [Helicobacter pylori HPAG1]
 gi|188144590|gb|ACD49007.1| flagellar basal body rod protein FlgC [Helicobacter pylori Shi470]
 gi|216943727|gb|EEC23170.1| hypothetical protein HP9810_877g33 [Helicobacter pylori 98-10]
 gi|308062841|gb|ADO04729.1| flagellar basal body rod protein FlgC [Helicobacter pylori Cuz20]
 gi|315585965|gb|ADU40346.1| flagellar basal-body rod protein FlgC [Helicobacter pylori 35A]
 gi|317013372|gb|ADU83980.1| flagellar basal body rod protein FlgC [Helicobacter pylori
           Lithuania75]
 gi|317179760|dbj|BAJ57548.1| flagellar basal body rod protein FlgC [Helicobacter pylori F30]
 gi|317181261|dbj|BAJ59047.1| flagellar basal body rod protein FlgC [Helicobacter pylori F32]
          Length = 161

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 19/44 (43%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            +G++   N N++ EM  ++  T+ + +        +     AI
Sbjct: 113 AQGYVAYPNVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAI 156



 Score = 39.5 bits (90), Expect = 0.40,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 6/49 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44
           +SF+I      A   R + ++ N++N +T     G  +R  +  F   
Sbjct: 3  LSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFKAF 51


>gi|322379367|ref|ZP_08053738.1| flagellar basal body rod protein FlgC [Helicobacter suis HS1]
 gi|322380862|ref|ZP_08054952.1| flagellar basal body rod protein FlgC [Helicobacter suis HS5]
 gi|321146713|gb|EFX41523.1| flagellar basal body rod protein FlgC [Helicobacter suis HS5]
 gi|321148185|gb|EFX42714.1| flagellar basal body rod protein FlgC [Helicobacter suis HS1]
          Length = 165

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 17/42 (40%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N N + EM  +I  T+ + +        +     AI
Sbjct: 119 GYVSYPNVNPVVEMADLIEATRAYQANVAAFQSTKNMAANAI 160



 Score = 40.6 bits (93), Expect = 0.17,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 6/49 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44
           +SF+I      A   R + ++ N++N +T     G  +R  +  F   
Sbjct: 5  LSSFDISGYGLSAQRVRANLISSNIANANTTRTDEGGPYRRQEAVFKSF 53


>gi|26991070|ref|NP_746495.1| flagellar hook-associated protein FlgK [Pseudomonas putida
          KT2440]
 gi|24986104|gb|AAN69959.1|AE016634_8 flagellar hook-associated protein FlgK [Pseudomonas putida
          KT2440]
          Length = 680

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  +IGL+   A +  LS  ++N++N  T G+   +   +          
Sbjct: 1  MSSLISIGLSGLSASQAALSVTSNNIANAATSGYSRQQTVQAAGPSHNIGAG 52


>gi|254466614|ref|ZP_05080025.1| flagellar basal-body rod protein FlgC [Rhodobacterales bacterium
          Y4I]
 gi|206687522|gb|EDZ48004.1| flagellar basal-body rod protein FlgC [Rhodobacterales bacterium
          Y4I]
          Length = 130

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 22/42 (52%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44
           + ++  +   A   RL  V++N+SN DT G+R   V F  V
Sbjct: 6  KALSVTASGLKAQAARLRHVSENISNADTPGYRRKAVPFESV 47



 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 19/48 (39%), Gaps = 3/48 (6%)

Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS---MLEAIRN 240
            G  E SN + M E+       + + +   + ++       ++E +R 
Sbjct: 83  SGHFEGSNVDLMIEIADAREAQRSYEANLKMFEQTRSMSASLMELLRR 130


>gi|157961169|ref|YP_001501203.1| flagellar basal body rod protein FlgC [Shewanella pealeana ATCC
           700345]
 gi|157846169|gb|ABV86668.1| flagellar basal-body rod protein FlgC [Shewanella pealeana ATCC
           700345]
          Length = 138

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 20/43 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           GF+   N N M EM  MI  ++ +     + +  +  + + +R
Sbjct: 93  GFIYKPNVNVMEEMANMISASRSYQMNVQVTEAAKSMLQQTLR 135



 Score = 37.5 bits (85), Expect = 1.6,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 27/84 (32%), Gaps = 6/84 (7%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56
            FN+  +   A   RL+T A N++N D+V       +R     F   +   +       
Sbjct: 5  NIFNVAGSGMSAQSVRLNTTASNIANADSVSSSVGETYRARHPIFEAEMSKAQQHQSAAQ 64

Query: 57 SFVASGKEYLSKEVGSFISTGTEL 80
          S    G       +    S    +
Sbjct: 65 SVAVKGIVESDLPLNKEFSPDHPM 88


>gi|307265481|ref|ZP_07547036.1| flagellar hook-associated protein FlgK [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|306919435|gb|EFN49654.1| flagellar hook-associated protein FlgK [Thermoanaerobacter wiegelii
           Rt8.B1]
          Length = 480

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 16/41 (39%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  +   EM  MI   + + +   +I   ++ +   I  + 
Sbjct: 436 SGVSLDEEMTNMIKYQKSYAASARVITAMDELLDTLINRMG 476



 Score = 51.0 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 7/54 (12%), Positives = 17/54 (31%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56
              I        ++ L     N++N +T G+    V  + +       +  + 
Sbjct: 5  QGLEIAKTGLFVSQKALDVTGHNIANANTTGYTRQVVDMASIAPPTTFGMYDQW 58


>gi|218516400|ref|ZP_03513240.1| flagellar hook protein FlgE [Rhizobium etli 8C-3]
          Length = 126

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 12/32 (37%), Positives = 21/32 (65%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFR 35
          S    ++   A   RLSTV+DN+++ +TVG++
Sbjct: 31 SMKTAVSGMSAQANRLSTVSDNIADANTVGYK 62


>gi|23016761|ref|ZP_00056514.1| COG1558: Flagellar basal body rod protein [Magnetospirillum
           magnetotacticum MS-1]
          Length = 138

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 16/41 (39%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
           G++   N N + EM  M    + + +   +I  +   M   
Sbjct: 93  GYVLAPNVNPLIEMMDMREAQRSYEANLQVIQTSRTMMDRT 133



 Score = 38.3 bits (87), Expect = 0.95,   Method: Composition-based stats.
 Identities = 9/33 (27%), Positives = 15/33 (45%), Gaps = 3/33 (9%)

Query: 1  MQTSFN---IGLAAQLALEQRLSTVADNMSNTD 30
          M    N   I  +      QRL  +++N++N D
Sbjct: 3  MDPLMNSSKIAKSGLKVQSQRLRVISENLANAD 35


>gi|311068140|ref|YP_003973063.1| flagellar basal body rod protein FlgC [Bacillus atrophaeus 1942]
 gi|310868657|gb|ADP32132.1| flagellar basal body rod protein FlgC [Bacillus atrophaeus 1942]
          Length = 149

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 26/46 (56%), Gaps = 1/46 (2%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G+++  N + + EM  ++  T+ + +  T ++ ++  +L+A+  I 
Sbjct: 104 GYVQKPNVDPLKEMVDLVSSTRSYEANVTAMNASKGMLLKAL-EIG 148



 Score = 43.3 bits (100), Expect = 0.033,   Method: Composition-based stats.
 Identities = 10/30 (33%), Positives = 16/30 (53%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV 32
           S N+  +A  A   R+  V+ N++N DT 
Sbjct: 5  QSLNVSGSALTAQRVRMDVVSSNLANMDTT 34


>gi|325274792|ref|ZP_08140821.1| flagellar hook-associated protein FlgK [Pseudomonas sp. TJI-51]
 gi|324100073|gb|EGB97890.1| flagellar hook-associated protein FlgK [Pseudomonas sp. TJI-51]
          Length = 680

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 21/39 (53%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39
          M +  +IGL+   A +  LS  ++N++N  T G+   + 
Sbjct: 1  MSSLISIGLSGLNASQAALSVTSNNIANAATSGYSRQQT 39


>gi|315452789|ref|YP_004073059.1| flagellar basal-body rod protein [Helicobacter felis ATCC 49179]
 gi|315131841|emb|CBY82469.1| flagellar basal-body rod protein [Helicobacter felis ATCC 49179]
          Length = 163

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 17/42 (40%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N N + EM  +I  T+ + +        +     AI
Sbjct: 117 GYVSYPNVNPVVEMADLIEATRAYQANVAAFQSTKNMATNAI 158



 Score = 40.2 bits (92), Expect = 0.26,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 6/49 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44
           +SF+I      A   R + ++ N++N +T     G  +R  +  F   
Sbjct: 3  LSSFDISGYGLSAQRVRANLISSNIANANTTRTDEGGPYRRQEAIFKSF 51


>gi|319944137|ref|ZP_08018415.1| flagellar basal-body rod protein FlgC [Lautropia mirabilis ATCC
           51599]
 gi|319742631|gb|EFV95040.1| flagellar basal-body rod protein FlgC [Lautropia mirabilis ATCC
           51599]
          Length = 149

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 23/43 (53%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++  SN N + EM  MI  ++ + +   +++  ++  L+ + 
Sbjct: 104 GYVMHSNVNVIEEMVNMISASRSYQNNVEMMNTAQQLALKTLS 146



 Score = 41.0 bits (94), Expect = 0.14,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 9/64 (14%)

Query: 1  MQTSFNI---GLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKND 51
          M +  NI     +A  A  QRL+TVA N++N DTV       ++  +V F   +   +  
Sbjct: 1  MSSLMNILPLAGSALSAQSQRLNTVASNLANADTVAGPDGSVYKARQVVFKPAMVEARQA 60

Query: 52 IDQK 55
             +
Sbjct: 61 AGAR 64


>gi|317182784|dbj|BAJ60568.1| flagellar basal body rod protein FlgC [Helicobacter pylori F57]
          Length = 161

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 19/44 (43%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            +G++   N N++ EM  ++  T+ + +        +     AI
Sbjct: 113 AQGYVAYPNVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAI 156



 Score = 39.5 bits (90), Expect = 0.43,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 6/49 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44
           +SF+I      A   R + ++ N++N +T     G  +R  +  F   
Sbjct: 3  LSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFKAF 51


>gi|207093272|ref|ZP_03241059.1| flagellar hook protein FlgE [Helicobacter pylori HPKX_438_AG0C1]
          Length = 40

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 3/37 (8%), Positives = 16/37 (43%)

Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           N +    +  +I + + F + +  +  +++ +   + 
Sbjct: 1   NVDLSRSLTNLIVVQRGFQANSKAVTTSDQILNTLLN 37


>gi|83589598|ref|YP_429607.1| flagellar hook-associated protein FlgK [Moorella thermoacetica ATCC
           39073]
 gi|83572512|gb|ABC19064.1| Flagellar hook-associated protein [Moorella thermoacetica ATCC
           39073]
          Length = 486

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 12/97 (12%), Positives = 30/97 (30%), Gaps = 9/97 (9%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFL--------ED-SNAN 205
           IA +    ++        +              + + +T  +G L        E  S  +
Sbjct: 387 IAQLQHKLIENLDNTTFDDYYKNFTAKLGVDAHEATRMTTNQGVLVDQLTNRKESISGVS 446

Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
              EM  M+   + + +   +I   +  + + I  + 
Sbjct: 447 LDEEMANMLQYLRAYEASARMITTLDSMLDKIINGMG 483



 Score = 49.1 bits (115), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 27/85 (31%), Gaps = 1/85 (1%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           FN  L    A ++ + T + N++N +T G+   +V  +    A       +        
Sbjct: 7  GFNTALRGMQAQQRGIYTTSHNIANANTEGYTRQQVVLTAT-PAYPVPAMNRPGGQGWQI 65

Query: 64 EYLSKEVGSFISTGTELDFALEGDA 88
                  +       LD  +  + 
Sbjct: 66 GTGVDSQETRRLRDEFLDTQIRRET 90


>gi|269965426|ref|ZP_06179545.1| Flagellar basal-body rod protein flgC [Vibrio alginolyticus 40B]
 gi|269829905|gb|EEZ84135.1| Flagellar basal-body rod protein flgC [Vibrio alginolyticus 40B]
          Length = 70

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 23/43 (53%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N M EM  MI  ++ + +   + D +++ +L  ++
Sbjct: 25  GYIYKPNVNVMEEMANMISASRAYQTNVQVADSSKQMLLRTLQ 67


>gi|154686035|ref|YP_001421196.1| flagellar basal body rod protein FlgC [Bacillus amyloliquefaciens
           FZB42]
 gi|154351886|gb|ABS73965.1| FlgC [Bacillus amyloliquefaciens FZB42]
          Length = 150

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 26/46 (56%), Gaps = 1/46 (2%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G+++  N + + EM  ++  T+ + +  T ++ ++  +L+A+  I 
Sbjct: 105 GYVQKPNVDPLKEMVDLVSSTRSYEANVTALNASKGMLLKAL-EIG 149



 Score = 46.0 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 35/114 (30%), Gaps = 17/114 (14%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTV------G----FRTIKV-------KFSEVV 45
            S NI  +A  A   R+  V+ N++N DT       G    +R   V        FS ++
Sbjct: 5   QSLNISGSALTAQRVRMDVVSSNLANMDTTRAKQVNGEWVPYRRKLVSLQSGGESFSSLL 64

Query: 46  GAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
            +  N      + V            + +      D   +G        P   +
Sbjct: 65  HSKMNGTGSAGNGVKVSGVTEDPSAFNLVYDPENPDANKDGYVQKPNVDPLKEM 118


>gi|15646165|ref|NP_208349.1| flagellar basal body rod protein FlgC [Helicobacter pylori 26695]
 gi|217031711|ref|ZP_03437215.1| hypothetical protein HPB128_155g24 [Helicobacter pylori B128]
 gi|298737153|ref|YP_003729683.1| flagellar basal-body rod protein FlgC [Helicobacter pylori B8]
 gi|2314741|gb|AAD08598.1| flagellar basal-body rod protein (flgC) [Helicobacter pylori 26695]
 gi|216946558|gb|EEC25158.1| hypothetical protein HPB128_155g24 [Helicobacter pylori B128]
 gi|298356347|emb|CBI67219.1| flagellar basal-body rod protein FlgC [Helicobacter pylori B8]
          Length = 161

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 19/44 (43%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            +G++   N N++ EM  ++  T+ + +        +     AI
Sbjct: 113 AQGYVAYPNVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAI 156



 Score = 39.5 bits (90), Expect = 0.42,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 6/49 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44
           +SF+I      A   R + ++ N++N +T     G  +R  +  F   
Sbjct: 3  LSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFKAF 51


>gi|327441344|dbj|BAK17709.1| flagellar hook-associated protein [Solibacillus silvestris StLB046]
          Length = 562

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 18/39 (46%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            +   EM  MI   Q +N+   +I   ++++ + I  + 
Sbjct: 520 VSLDEEMTNMITFQQAYNANARMITVIDETLDKIINGMG 558



 Score = 39.5 bits (90), Expect = 0.37,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 17/44 (38%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54
               +  L T   N+SN +T+G+   +V      G     ++ 
Sbjct: 14 GLYTQQSALYTTGHNISNANTLGYSRQRVNMETTPGFPGAGLNS 57


>gi|315127355|ref|YP_004069358.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Pseudoalteromonas sp. SM9913]
 gi|315015869|gb|ADT69207.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Pseudoalteromonas sp. SM9913]
          Length = 143

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 21/42 (50%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N N + EM  MI  ++ + +   + D  ++ + + +
Sbjct: 97  GYIYKPNVNVVEEMANMISASRSYQTNVQVADAAKQMLSKTL 138



 Score = 38.7 bits (88), Expect = 0.70,   Method: Composition-based stats.
 Identities = 17/96 (17%), Positives = 36/96 (37%), Gaps = 7/96 (7%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKF-SEVVGAIKNDIDQK 55
             F+I  +   A   RL+T A N+SN +T+       +R  +  F +E+  A  +  + +
Sbjct: 5   NVFDIAGSGMSAQNVRLNTTASNISNANTISSSQNETYRARQPVFAAELTKASASASNPQ 64

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA 91
            S V      + +              + + + +  
Sbjct: 65  GSAVGVKVLGVVESNKPLQIEYNPNHPSADENGYIY 100


>gi|205373369|ref|ZP_03226173.1| flagellar basal body rod protein FlgC [Bacillus coahuilensis m4-4]
          Length = 149

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 26/42 (61%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G+++  N + + EM  +I  T+ + +  T+++ N+  +++++
Sbjct: 104 GYVKMPNVDPLREMTDLISATRSYEANVTVMNANKALLMKSL 145



 Score = 43.7 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 10/30 (33%), Positives = 16/30 (53%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV 32
           S NI  +A  A   R+  ++ N++N DT 
Sbjct: 5  QSINISTSALTAQRLRMDVISSNVANADTT 34


>gi|262173360|ref|ZP_06041037.1| flagellar hook-associated protein FlgK [Vibrio mimicus MB-451]
 gi|261890718|gb|EEY36705.1| flagellar hook-associated protein FlgK [Vibrio mimicus MB-451]
          Length = 457

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 18/43 (41%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44
              NI L+   A    L   A N++N +T GF   +   + V
Sbjct: 1  MNIVNIALSGLNANRVALDVTAQNVANINTPGFSRQQAIMTSV 43



 Score = 35.6 bits (80), Expect = 6.0,   Method: Composition-based stats.
 Identities = 11/92 (11%), Positives = 30/92 (32%), Gaps = 5/92 (5%)

Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLED----SNANSM 207
            K +A  G  ++ ++  F                 +  +  ++ +  +E     S  NS 
Sbjct: 365 NKPVAITGFGNISINDAFTSMVGETAIKARQAD-SDYQTRTSMNQQAIESRNNVSAVNSD 423

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            E   ++     +N+   +I    +     ++
Sbjct: 424 EEAANLMTFANAYNANMKVISTANQLFDSVLQ 455


>gi|83647176|ref|YP_435611.1| flagellar basal body rod protein FlgB [Hahella chejuensis KCTC
          2396]
 gi|83635219|gb|ABC31186.1| Flagellar basal body protein [Hahella chejuensis KCTC 2396]
          Length = 131

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 23/49 (46%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50
            +  I   A     +R   +A+N++N DT GFR   + F  V+   K+
Sbjct: 6  DKALGIHEQALNVRTRRAEVLANNIANADTPGFRARDIDFKAVLRQAKS 54


>gi|192361114|ref|YP_001982394.1| flagellar hook-associated protein 1 FlgK [Cellvibrio japonicus
          Ueda107]
 gi|190687279|gb|ACE84957.1| flagellar hook-associated protein 1 FlgK [Cellvibrio japonicus
          Ueda107]
          Length = 923

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 23/63 (36%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M    +  ++   A +  L T   N+SN +T G+   +V +S              S V 
Sbjct: 1  MSGILSNAISGLQASQNALRTAGHNISNANTTGYTRQQVVYSTRPEQSAGAAGFVGSGVT 60

Query: 61 SGK 63
          +  
Sbjct: 61 TTS 63



 Score = 39.9 bits (91), Expect = 0.32,   Method: Composition-based stats.
 Identities = 6/40 (15%), Positives = 13/40 (32%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           S  N   E   +I   Q + +   +I    +     +  +
Sbjct: 884 SGVNLDEEAADLIRFQQLYQANARVITVARELFDTLLNAL 923


>gi|323705449|ref|ZP_08117024.1| flagellar basal-body rod protein FlgB [Thermoanaerobacterium
          xylanolyticum LX-11]
 gi|323535351|gb|EGB25127.1| flagellar basal-body rod protein FlgB [Thermoanaerobacterium
          xylanolyticum LX-11]
          Length = 136

 Score = 51.8 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 21/41 (51%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51
          A  A E R   +++N++N DT GF+   V F  ++    N 
Sbjct: 15 ALDASELRNEVISNNIANVDTPGFKRSDVNFESILNDAINS 55


>gi|317011794|gb|ADU85541.1| flagellar basal body rod protein FlgC [Helicobacter pylori
           SouthAfrica7]
          Length = 161

 Score = 51.8 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 19/44 (43%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            +G++   N N++ EM  ++  T+ + +        +     AI
Sbjct: 113 AQGYVAYPNVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAI 156



 Score = 39.5 bits (90), Expect = 0.44,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 6/49 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44
           +SF+I      A   R + ++ N++N +T     G  +R  +  F   
Sbjct: 3  LSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFKAF 51


>gi|189426355|ref|YP_001953532.1| flagellar basal-body rod protein FlgC [Geobacter lovleyi SZ]
 gi|189422614|gb|ACD97012.1| flagellar basal-body rod protein FlgC [Geobacter lovleyi SZ]
          Length = 145

 Score = 51.8 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 19/43 (44%)

Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           +G++   N N + EM  MI  T+ + +        +   L+ +
Sbjct: 99  QGYVALPNVNVVEEMADMITATRVYEANVMSAQAAKNMALKTL 141



 Score = 46.0 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 23/51 (45%), Gaps = 8/51 (15%)

Query: 1  MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43
          M   T+ N   +A  A   R++ ++ N++N +T     G  ++     F+ 
Sbjct: 1  MDLFTAMNTSSSALTAERTRMNLISSNLANVNTTRTPEGGPYKRKDAVFAA 51


>gi|86139479|ref|ZP_01058048.1| flagellar basal-body rod protein FlgC [Roseobacter sp. MED193]
 gi|85823982|gb|EAQ44188.1| flagellar basal-body rod protein FlgC [Roseobacter sp. MED193]
          Length = 130

 Score = 51.8 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
           S ++  +   A   RL  V++N+SN DT G+R   V F  
Sbjct: 6  NSLSVTASGLKAQATRLRHVSENISNADTPGYRRKSVPFEA 46



 Score = 41.8 bits (96), Expect = 0.084,   Method: Composition-based stats.
 Identities = 6/38 (15%), Positives = 15/38 (39%)

Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
            G  E SN + M E+       + +++   + ++    
Sbjct: 83  SGHYEGSNVDLMIEIADAREAQRSYDANLKMFEQTRGM 120


>gi|294339836|emb|CAZ88199.1| putative flagellar hook-associated protein FlgK [Thiomonas sp.
          3As]
          Length = 667

 Score = 51.8 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 18/47 (38%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51
           N  L    A +  L    +N++N +T G+       S +  ++   
Sbjct: 8  LNNALTGLQAAQSALQVTGNNIANVNTPGYSRETAVQSTLTPSLYGG 54


>gi|299531280|ref|ZP_07044690.1| flagellar hook-associated protein FlgK [Comamonas testosteroni
          S44]
 gi|298720687|gb|EFI61634.1| flagellar hook-associated protein FlgK [Comamonas testosteroni
          S44]
          Length = 648

 Score = 51.8 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 22/51 (43%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
           +  N+G  A +A +  L T   N++N +T G+    V F    G    + 
Sbjct: 1  MSLLNVGARALMANQIALQTTGHNIANVNTAGYSRQSVAFQTSAGQNIGNG 51



 Score = 35.2 bits (79), Expect = 8.0,   Method: Composition-based stats.
 Identities = 5/41 (12%), Positives = 15/41 (36%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E  +++   Q + +   ++   +      I+ + 
Sbjct: 607 SGVNLDEEAAKLLQYQQSYQASAKMLQVAQGIFDSVIQAVG 647


>gi|160901877|ref|YP_001567458.1| flagellar hook-associated protein FlgK [Petrotoga mobilis SJ95]
 gi|160359521|gb|ABX31135.1| flagellar hook-associated protein FlgK [Petrotoga mobilis SJ95]
          Length = 818

 Score = 51.8 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 33/225 (14%), Positives = 54/225 (24%), Gaps = 12/225 (5%)

Query: 28  NTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGD 87
           N    G           V    N ID  +  V             FI   +     L   
Sbjct: 594 NATNTGVTASVTPHGSFVLRAGNLIDFDLKNVTIKGPEKLFNALGFIEDDSNNIVTLISP 653

Query: 88  AWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGE 147
                        +     K+ ++  +V+       L      +         N    G 
Sbjct: 654 D--ISPEQIDEKFSEADLLKIDNELGIVNQISVSSNLKENPSLLATDLGYYDINYSPTGA 711

Query: 148 ISQKG-KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFL--EDS-- 202
            +      I+ M   SV  +         G          E    + +    L  E S  
Sbjct: 712 GNVSVWDEISKMYDNSVLDNGRVGFSNFLGNIVTDIGVKGETADKMRLNSEMLNSEISLE 771

Query: 203 -----NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
                  +   EM  ++   Q FN+   +I    + M   I N+ 
Sbjct: 772 KERVMGVSIDEEMTNLVKYQQAFNASARVITAVNQMMETVINNLG 816


>gi|168187526|ref|ZP_02622161.1| flagellar hook-associated protein FlgK [Clostridium botulinum C
          str. Eklund]
 gi|169294577|gb|EDS76710.1| flagellar hook-associated protein FlgK [Clostridium botulinum C
          str. Eklund]
          Length = 678

 Score = 51.8 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 11/90 (12%), Positives = 32/90 (35%), Gaps = 4/90 (4%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV----VGAIKNDIDQKISF 58
          ++ N+G     A +  L   + N++N++T G+   +          + ++ N +      
Sbjct: 6  STLNVGKRGLYAQQGALDVTSHNIANSNTKGYTRQRALMETTRPFGMPSMDNQVGPGQIG 65

Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDA 88
                 + +   +F+      + +  G  
Sbjct: 66 TGVEISKIQRVRDTFMDYQVRRETSTLGQY 95



 Score = 46.0 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 5/40 (12%), Positives = 15/40 (37%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           S  +   EM  ++     + +   +I   ++ +   I  +
Sbjct: 637 SGVSLNEEMANIVQYQHAYQANAKIIATTDQLLDVVINGL 676


>gi|254780090|ref|YP_003058197.1| flagellar basal body rod protein FlgC [Helicobacter pylori B38]
 gi|254002003|emb|CAX30262.1| Flagellar basal-body rod protein FlgC [Helicobacter pylori B38]
          Length = 161

 Score = 51.8 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 19/44 (43%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            +G++   N N++ EM  ++  T+ + +        +     AI
Sbjct: 113 AQGYVAYPNVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAI 156



 Score = 39.9 bits (91), Expect = 0.33,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 6/49 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44
           +SF+I      A   R + ++ N++N +T     G  +R  +  F   
Sbjct: 3  LSSFDISGYGLSAQRLRANLISSNIANVNTTRTSEGGPYRRQEAVFKAF 51


>gi|220927554|ref|YP_002504463.1| flagellar hook-associated protein FlgK [Clostridium
          cellulolyticum H10]
 gi|219997882|gb|ACL74483.1| flagellar hook-associated protein FlgK [Clostridium
          cellulolyticum H10]
          Length = 537

 Score = 51.8 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 23/80 (28%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
            NI L+     ++ L TV  N+SN  T G+   +   S        D    +   +   
Sbjct: 7  GLNIALSGLYTAQRNLDTVGHNLSNASTPGYSRQQSIQSASNPLAVMDGTGMVGTGSQVT 66

Query: 64 EYLSKEVGSFISTGTELDFA 83
                           + A
Sbjct: 67 GVERIRDTYLDFKYWSENVA 86



 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/222 (12%), Positives = 66/222 (29%), Gaps = 11/222 (4%)

Query: 32  VGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA 91
             ++    +F        N+   +   +  G E+            ++L  A  G  +F 
Sbjct: 314 PYYQRKLNEFVRTFAINFNEGYTRNDALPDGYEHNGVGHIEGYGYDSDLTDAPTGIRFFT 373

Query: 92  LESPRGIIL-------TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE 144
           +       +       T      + +  + ++A       D+     +I   D     G 
Sbjct: 374 MLCVGDTPISGSAFIGTATSVGDIANQYNQITAKNFSVSSDIIDDANRIATSDADGQNGN 433

Query: 145 KGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP-PTPLEDLSGVTVKR---GFLE 200
              + +   + +   L+     + F++   +G+  +              V++     + 
Sbjct: 434 TNILKKLMGIRSNQSLFKEGAPEDFMKSLVAGMGIDAQQAETFAKTQKALVRQVDNRRMS 493

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            S  N   EM  M+   Q +N+   +I    +     I  + 
Sbjct: 494 VSGVNLNEEMTNMVKFQQSYNAAARMIVTMGEIYDTLINRLG 535


>gi|221069316|ref|ZP_03545421.1| flagellar hook-associated protein FlgK [Comamonas testosteroni
          KF-1]
 gi|220714339|gb|EED69707.1| flagellar hook-associated protein FlgK [Comamonas testosteroni
          KF-1]
          Length = 648

 Score = 51.8 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 22/51 (43%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
           +  N+G  A +A +  L T   N++N +T G+    V F    G    + 
Sbjct: 1  MSLLNVGARALMANQIALQTTGHNIANVNTAGYSRQSVAFQTSAGQNIGNG 51



 Score = 36.8 bits (83), Expect = 3.0,   Method: Composition-based stats.
 Identities = 5/42 (11%), Positives = 15/42 (35%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            S  N   E  +++   Q + +   ++   +      I+ + 
Sbjct: 606 MSGVNLDEEAAKLLQYQQSYQASAKMLQVAQGIFDSVIQAVG 647


>gi|332305621|ref|YP_004433472.1| flagellar hook-associated protein FlgK [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332172950|gb|AEE22204.1| flagellar hook-associated protein FlgK [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 709

 Score = 51.8 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 47/130 (36%), Gaps = 4/130 (3%)

Query: 1   MQTS---FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKF-SEVVGAIKNDIDQKI 56
           M  +    +I  +   A  Q LST  +N++N +T G+   +  F +++ G +     +++
Sbjct: 1   MIRTADLVSIARSGVEASNQLLSTTGNNIANVNTDGYVRERTSFVAQLTGGVGQYTTERV 60

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVS 116
               +  +                  A+  + + +  +     ++R      T +    +
Sbjct: 61  MNTFAQNQLRRDTTNLAEHEAYWTKTAVLDNVFASEANSISASMSRFFASLQTANDDPTN 120

Query: 117 ASGKYPVLDM 126
            S +  VL  
Sbjct: 121 MSARQLVLGD 130


>gi|238927421|ref|ZP_04659181.1| flagellar basal body rod protein [Selenomonas flueggei ATCC
          43531]
 gi|238884703|gb|EEQ48341.1| flagellar basal body rod protein [Selenomonas flueggei ATCC
          43531]
          Length = 139

 Score = 51.8 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 22/46 (47%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50
           ++   A  A   R   +++N++N +T  FR   V+F +++     
Sbjct: 11 IDVSSRALSAANLRHEVLSNNIANVNTPYFRRSHVRFEDLLRKELG 56


>gi|256830790|ref|YP_003159518.1| flagellar basal-body rod protein FlgC [Desulfomicrobium baculatum
           DSM 4028]
 gi|256579966|gb|ACU91102.1| flagellar basal-body rod protein FlgC [Desulfomicrobium baculatum
           DSM 4028]
          Length = 145

 Score = 51.8 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 8/46 (17%), Positives = 21/46 (45%), Gaps = 1/46 (2%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G++   + N + EM  M+   + + +  + I  ++    +A+  I 
Sbjct: 100 GYVSYPDINVVEEMTNMLSAMRAYEANVSTITTSKSMFSKAL-EIG 144



 Score = 43.3 bits (100), Expect = 0.032,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 24/54 (44%), Gaps = 6/54 (11%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIK 49
           T+ ++G +A  A    L+ ++ N++N  T     G  +R  +V F E      
Sbjct: 4  MTAIDVGASALKAERTHLNVISMNLANAKTTRTVDGGPYRRKEVVFKETEVQSP 57


>gi|261344144|ref|ZP_05971788.1| flagellar basal-body rod protein FlgC [Providencia rustigianii DSM
           4541]
 gi|282567736|gb|EFB73271.1| flagellar basal-body rod protein FlgC [Providencia rustigianii DSM
           4541]
          Length = 134

 Score = 51.8 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 5/43 (11%), Positives = 22/43 (51%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G+++  N +++ EM   I  ++ + +   +++  +  + + + 
Sbjct: 89  GYVQMPNVDTVGEMINTISASRSYQANLEVMNTAKTLLQKTLT 131



 Score = 37.9 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 6/47 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFS 42
           + F+I  +A  A  QRL+  A NM+N ++V       +R  +V F 
Sbjct: 4  LSIFDISASALTAQSQRLNVSASNMANAESVAGPDGQPYRAKQVVFQ 50


>gi|253681928|ref|ZP_04862725.1| flagellar hook-associated protein FlgK [Clostridium botulinum D
          str. 1873]
 gi|253561640|gb|EES91092.1| flagellar hook-associated protein FlgK [Clostridium botulinum D
          str. 1873]
          Length = 686

 Score = 51.8 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 17/39 (43%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
           N+G     A +  L   + N++N++T G+   +     
Sbjct: 8  LNVGKRGLYAQQGALDVTSHNIANSNTEGYTRQRAIMET 46



 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 5/41 (12%), Positives = 15/41 (36%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
            S  +   EM  ++     + +   +I   ++ +   I  +
Sbjct: 644 TSGVSLNEEMANIVQYQHAYQANAKIIATTDQLLDVVINGL 684


>gi|160896081|ref|YP_001561663.1| flagellar basal-body rod protein FlgC [Delftia acidovorans SPH-1]
 gi|160361665|gb|ABX33278.1| flagellar basal-body rod protein FlgC [Delftia acidovorans SPH-1]
          Length = 134

 Score = 51.8 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 25/43 (58%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++  SN +++ EM  MI  ++ + +   +++  +  +L+ ++
Sbjct: 89  GYVTHSNVSAVDEMVNMISASRSYQNNVEVMNTTKSLLLKTLQ 131



 Score = 40.2 bits (92), Expect = 0.22,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 39/109 (35%), Gaps = 6/109 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQ 54
           M + F+I  +A  A  QRL+ VA N++N D V       ++  +V F  V    +     
Sbjct: 3   MFSIFSISGSAVSAQSQRLNVVASNLANVDAVAGPDGKAYQARQVVFQTVAMGEEGSSGV 62

Query: 55  KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103
           ++S ++       +             +    +     E    I  +R 
Sbjct: 63  RVSAISQDNTPGRRIHDPQHPLADAEGYVTHSNVSAVDEMVNMISASRS 111


>gi|317010250|gb|ADU80830.1| flagellar basal body rod protein FlgC [Helicobacter pylori India7]
          Length = 161

 Score = 51.8 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 19/44 (43%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            +G++   N N++ EM  ++  T+ + +        +     AI
Sbjct: 113 AQGYVAYPNVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAI 156



 Score = 39.1 bits (89), Expect = 0.49,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 6/49 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44
           +SF+I      A   R + ++ N++N +T     G  +R  +  F   
Sbjct: 3  LSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFKAF 51


>gi|167626153|ref|YP_001676447.1| flagellar basal-body rod protein FlgC [Shewanella halifaxensis
           HAW-EB4]
 gi|167356175|gb|ABZ78788.1| flagellar basal-body rod protein FlgC [Shewanella halifaxensis
           HAW-EB4]
          Length = 139

 Score = 51.8 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 27/48 (56%), Gaps = 1/48 (2%)

Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           +G++  SN N++ EM  M+  ++ F +   +++   +SM + +  + +
Sbjct: 92  QGYVAYSNVNTVEEMADMMAASRSFETNVEIMNRA-RSMQQGLLQLGA 138



 Score = 36.0 bits (81), Expect = 4.2,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 6/51 (11%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKND 51
          I  A   A   RL+TVA N++N           FR +K  FS +    +  
Sbjct: 9  IAGAGMNAQTIRLNTVASNLANAGAAAESPDEAFRALKPVFSTIYKQTQEG 59


>gi|221069324|ref|ZP_03545429.1| flagellar basal-body rod protein FlgC [Comamonas testosteroni KF-1]
 gi|264676568|ref|YP_003276474.1| flagellar basal-body rod protein FlgC [Comamonas testosteroni
           CNB-2]
 gi|299531288|ref|ZP_07044698.1| flagellar basal-body rod protein FlgC [Comamonas testosteroni S44]
 gi|220714347|gb|EED69715.1| flagellar basal-body rod protein FlgC [Comamonas testosteroni KF-1]
 gi|262207080|gb|ACY31178.1| flagellar basal-body rod protein FlgC [Comamonas testosteroni
           CNB-2]
 gi|298720695|gb|EFI61642.1| flagellar basal-body rod protein FlgC [Comamonas testosteroni S44]
          Length = 134

 Score = 51.8 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 25/43 (58%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++  SN +++ EM  MI  ++ + +   +++  +  +L+ ++
Sbjct: 89  GYVTHSNVSAVDEMVNMISASRSYQNNVEVMNTAKTLLLKTLQ 131



 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 38/109 (34%), Gaps = 6/109 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQ 54
           M + FNI  +A  A  QRL+ VA N++N D V       ++  +V F  V          
Sbjct: 3   MFSIFNISGSAVSAQSQRLNVVASNLANVDAVAGPDGSVYKARQVVFQTVPMGNDGSAGV 62

Query: 55  KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103
           K++ ++       +             +    +     E    I  +R 
Sbjct: 63  KVNAISEDNTPGRRIHDPSNPLADGEGYVTHSNVSAVDEMVNMISASRS 111


>gi|255321464|ref|ZP_05362622.1| flagellar basal-body rod protein FlgC [Campylobacter showae RM3277]
 gi|255301320|gb|EET80579.1| flagellar basal-body rod protein FlgC [Campylobacter showae RM3277]
          Length = 165

 Score = 51.8 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 8/45 (17%), Positives = 19/45 (42%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           G++   N N + EM  +I  T+ + +  +     +     A+  +
Sbjct: 119 GYVAYPNINPVIEMADLIEATRAYQANVSAFQSAKTIAQSALELL 163



 Score = 45.6 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 6/40 (15%)

Query: 11 AQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44
             A   R++ ++ N++N +TV    G  +R  +V F  V
Sbjct: 14 GLSAQRFRMNVISSNIANANTVRTAEGGPYRRREVIFKAV 53


>gi|302389655|ref|YP_003825476.1| flagellar basal-body rod protein FlgB [Thermosediminibacter
          oceani DSM 16646]
 gi|302200283|gb|ADL07853.1| flagellar basal-body rod protein FlgB [Thermosediminibacter
          oceani DSM 16646]
          Length = 136

 Score = 51.8 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 30/63 (47%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
            A   R   +A+N++N DT  F+   V F E++     + + ++    + ++++S    
Sbjct: 15 MDAKWMRHEVLANNIANVDTPNFKRSDVVFEELLQKYLKESNSRLPLKTTSEKHISNLKP 74

Query: 72 SFI 74
          +F 
Sbjct: 75 TFD 77


>gi|269792948|ref|YP_003317852.1| flagellar basal-body rod protein FlgC [Thermanaerovibrio
           acidaminovorans DSM 6589]
 gi|269100583|gb|ACZ19570.1| flagellar basal-body rod protein FlgC [Thermanaerovibrio
           acidaminovorans DSM 6589]
          Length = 139

 Score = 51.8 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 22/44 (50%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           + G++   N N + EM  M+  ++ + +  T+++  +     AI
Sbjct: 91  QEGYVAYPNVNVVREMADMMVASRAYEANLTVVETGKAMWNSAI 134



 Score = 42.9 bits (99), Expect = 0.041,   Method: Composition-based stats.
 Identities = 12/83 (14%), Positives = 23/83 (27%), Gaps = 6/83 (7%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDIDQKI 56
           S ++  +A  A    +  ++ N++N +T     G  +      F E + A   D     
Sbjct: 5  RSVDVAGSALTAHRVWMDAISSNLANVNTTRTPEGGPYVRRVPIFQERLMAAMKDGSTSS 64

Query: 57 SFVASGKEYLSKEVGSFISTGTE 79
                 E               
Sbjct: 65 GVKVVAIERDPLPPRMVYQPDHP 87


>gi|255523706|ref|ZP_05390672.1| flagellar basal-body rod protein FlgC [Clostridium carboxidivorans
           P7]
 gi|296186710|ref|ZP_06855112.1| flagellar basal-body rod protein FlgC [Clostridium carboxidivorans
           P7]
 gi|255512575|gb|EET88849.1| flagellar basal-body rod protein FlgC [Clostridium carboxidivorans
           P7]
 gi|296048747|gb|EFG88179.1| flagellar basal-body rod protein FlgC [Clostridium carboxidivorans
           P7]
          Length = 144

 Score = 51.4 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 20/44 (45%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            +G++   N N + EM  M+  T+ + +    I   +    +A+
Sbjct: 97  AQGYVSKPNVNVLNEMADMMVATRAYEANIDAISSEKTMFSKAL 140



 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 9/59 (15%)

Query: 1  MQTSFN---IGLAAQLALEQRLSTVADNMSNTDTV-G-----FRTIKVKFSEVVGAIKN 50
          M  +FN   I  +   A   R+ T+A N++N DT  G     +R     F E +    N
Sbjct: 1  MIKAFNNLRISASGLSAERLRMDTIASNIANVDTTRGANGQPYRRKIAVFQENLNTQLN 59


>gi|229544391|ref|ZP_04433449.1| flagellar basal-body rod protein FlgC [Bacillus coagulans 36D1]
 gi|229324876|gb|EEN90553.1| flagellar basal-body rod protein FlgC [Bacillus coagulans 36D1]
          Length = 149

 Score = 51.4 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 8/46 (17%), Positives = 24/46 (52%), Gaps = 1/46 (2%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G++   N + + EM  MI  T+ + +  T ++ ++  +++ +  + 
Sbjct: 104 GYVTKPNVDLLTEMTGMISATRSYEANVTALNASKAMLMKTL-ELG 148



 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 11/32 (34%), Positives = 16/32 (50%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32
          M T  NI   A  A   R+  ++ N++N DT 
Sbjct: 3  MFTGMNISSEALSAQRLRMDVISSNIANADTT 34


>gi|103488393|ref|YP_617954.1| flagellar hook-associated protein [Sphingopyxis alaskensis
          RB2256]
 gi|98978470|gb|ABF54621.1| Flagellar hook-associated protein [Sphingopyxis alaskensis
          RB2256]
          Length = 441

 Score = 51.4 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 25/50 (50%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50
          M     IG +   A  + LST+ DN++N  T G+   +++  E VG   +
Sbjct: 1  MSDLLGIGYSGLKAYSRALSTIGDNIANAQTPGYARRRLEMMEAVGGGNS 50


>gi|302670715|ref|YP_003830675.1| flagellar basal-body rod protein FlgB [Butyrivibrio
          proteoclasticus B316]
 gi|302395188|gb|ADL34093.1| flagellar basal-body rod protein FlgB [Butyrivibrio
          proteoclasticus B316]
          Length = 131

 Score = 51.4 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 12/78 (15%), Positives = 28/78 (35%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A  A   R   +A+N++N DT G++   + F + +     +                +  
Sbjct: 16 AADASWLRNEVIANNIANVDTPGYKRQDLNFEDELERALGNSRYVTMDAKVAGLKERELR 75

Query: 71 GSFISTGTELDFALEGDA 88
             I+  +   + L+ + 
Sbjct: 76 PRVINDYSNFSYRLDKNN 93


>gi|237751239|ref|ZP_04581719.1| flagellar basal body rod protein FlgC [Helicobacter bilis ATCC
           43879]
 gi|229372605|gb|EEO22996.1| flagellar basal body rod protein FlgC [Helicobacter bilis ATCC
           43879]
          Length = 163

 Score = 51.4 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 8/45 (17%), Positives = 18/45 (40%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +G++   N N + EM  ++  T+ + +        +     AI 
Sbjct: 115 AQGYVAYPNVNPVVEMADLVEATRAYQANVAAFQSAKNMASNAIT 159



 Score = 41.8 bits (96), Expect = 0.082,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 23/49 (46%), Gaps = 6/49 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44
           ++F+I      A   R++ ++ N++N +T     G  +R  +V F   
Sbjct: 3  MSTFDISGYGLSAQRVRVNVISANIANANTTRTDEGGPYRRQEVVFRAF 51


>gi|109948140|ref|YP_665368.1| flagellar basal body rod protein FlgC [Helicobacter acinonychis
           str. Sheeba]
 gi|109715361|emb|CAK00369.1| flagellar basal-body rod protein [Helicobacter acinonychis str.
           Sheeba]
          Length = 161

 Score = 51.4 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 19/44 (43%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            +G++   N N++ EM  ++  T+ + +        +     AI
Sbjct: 113 AQGYVAYPNVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAI 156



 Score = 39.1 bits (89), Expect = 0.51,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 6/49 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44
           +SF+I      A   R + ++ N++N +T     G  +R  +  F   
Sbjct: 3  LSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFKAF 51


>gi|307945654|ref|ZP_07660990.1| flagellar basal-body rod protein FlgC [Roseibium sp. TrichSKD4]
 gi|307771527|gb|EFO30752.1| flagellar basal-body rod protein FlgC [Roseibium sp. TrichSKD4]
          Length = 136

 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/130 (12%), Positives = 36/130 (27%), Gaps = 13/130 (10%)

Query: 1   MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKN- 50
           M    S  +  +   A   R+  +A+N++N ++         +R     F        N 
Sbjct: 1   MDLIKSLFVAASGLKAQNGRMRVIAENIANANSTAKTPDGEPYRRRVPTFQSHFSKELNA 60

Query: 51  ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107
              ++ +     ++ KE       +    G  L+  +      A           +    
Sbjct: 61  EVVELGKVAEDKSAFKERYQPGHPAANEQGYVLEPNVNTLIETADMREAQRSYEANLNVI 120

Query: 108 VTDDGSLVSA 117
            +    L   
Sbjct: 121 QSSRRMLQRT 130



 Score = 48.7 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 20/43 (46%)

Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           +G++ + N N++ E   M    + + +   +I  + + +   I
Sbjct: 89  QGYVLEPNVNTLIETADMREAQRSYEANLNVIQSSRRMLQRTI 131


>gi|226225705|ref|YP_002759811.1| flagellar hook-associated protein 1 [Gemmatimonas aurantiaca T-27]
 gi|226088896|dbj|BAH37341.1| flagellar hook-associated protein 1 [Gemmatimonas aurantiaca T-27]
          Length = 482

 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 7/38 (18%), Positives = 17/38 (44%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           S  N+  E+  M+ + Q + +   +I   ++ +   I 
Sbjct: 443 SGVNTDEELVNMLRVQQSYQAAAKMITAADEMLKTLIN 480



 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/94 (13%), Positives = 32/94 (34%), Gaps = 4/94 (4%)

Query: 1  MQTSFN-IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFV 59
          M +    I  +A L+ +  L T++ N++N +T GF   +     +       +       
Sbjct: 1  MGSGLFSIARSALLSHQTALQTISHNVANAETPGFSRQEAV---LAANTPVRLYNGNVGT 57

Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALE 93
                + ++    +         L G++    +
Sbjct: 58 GVHVATIQRKRDLLLDDNYRSANVLAGNSTMRRD 91


>gi|223040442|ref|ZP_03610716.1| flagellar basal-body rod protein FlgC [Campylobacter rectus RM3267]
 gi|222878292|gb|EEF13399.1| flagellar basal-body rod protein FlgC [Campylobacter rectus RM3267]
          Length = 165

 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 8/45 (17%), Positives = 19/45 (42%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           G++   N N + EM  +I  T+ + +  +     +     A+  +
Sbjct: 119 GYVAYPNINPVIEMADLIEATRAYQANVSAFQSAKTIAQSALELL 163



 Score = 45.6 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 6/40 (15%)

Query: 11 AQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44
             A   R++ ++ N++N +TV    G  +R  +V F  V
Sbjct: 14 GLSAQRFRMNVISSNIANANTVRTAEGGPYRRREVIFKAV 53


>gi|83594157|ref|YP_427909.1| flagellar basal body rod protein FlgC [Rhodospirillum rubrum ATCC
           11170]
 gi|83577071|gb|ABC23622.1| Flagellar basal-body rod protein FlgC [Rhodospirillum rubrum ATCC
           11170]
          Length = 137

 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/127 (12%), Positives = 36/127 (28%)

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           A+            I     +       +GE   + +V+    +   ++    VR     
Sbjct: 11  ATSGLKAQTERLRTIAQNMANADSMAERQGEDPYRRRVVTFKSVMDREVGAEMVRTGRVR 70

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
              +      +         G++   N N M EM  M    + + +   +I    +    
Sbjct: 71  EDMSAFTRKYDPSHPGADAEGYVLAPNVNPMVEMMDMREAQRSYEANLNVITATREMTRN 130

Query: 237 AIRNIAS 243
            +  + S
Sbjct: 131 TLELLRS 137



 Score = 39.1 bits (89), Expect = 0.50,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 33/111 (29%), Gaps = 11/111 (9%)

Query: 7   IGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVV----GAIKNDIDQK 55
           I  +   A  +RL T+A NM+N D++        +R   V F  V+    GA      + 
Sbjct: 10  IATSGLKAQTERLRTIAQNMANADSMAERQGEDPYRRRVVTFKSVMDREVGAEMVRTGRV 69

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106
              +++             + G  L   +                  +   
Sbjct: 70  REDMSAFTRKYDPSHPGADAEGYVLAPNVNPMVEMMDMREAQRSYEANLNV 120


>gi|183598615|ref|ZP_02960108.1| hypothetical protein PROSTU_02015 [Providencia stuartii ATCC 25827]
 gi|188020794|gb|EDU58834.1| hypothetical protein PROSTU_02015 [Providencia stuartii ATCC 25827]
          Length = 134

 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 5/43 (11%), Positives = 20/43 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N + + EM   I  ++ + +   +++  +  + + + 
Sbjct: 89  GYVRMPNVDMVGEMINTISASRSYQANLEVMNTAKTLLQKTLT 131



 Score = 39.5 bits (90), Expect = 0.40,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 39/121 (32%), Gaps = 6/121 (4%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSEVVGAIKNDIDQK 55
            + F+I  +A  A  QRL+  A NM+N    VG     FR  +V F             +
Sbjct: 4   LSIFDISASALTAQSQRLNVSASNMANAESVVGPDGEPFRAKQVVFQMTPQGRNGVGGVR 63

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115
           +S +         E         E  +    +     E    I  +R  +  +    +  
Sbjct: 64  VSQLIEDPTPPRMEYKPGHPLADEKGYVRMPNVDMVGEMINTISASRSYQANLEVMNTAK 123

Query: 116 S 116
           +
Sbjct: 124 T 124


>gi|157738153|ref|YP_001490837.1| flagellar basal body rod protein FlgC [Arcobacter butzleri
          RM4018]
 gi|157700007|gb|ABV68167.1| flagellar basal body rod protein FlgC [Arcobacter butzleri
          RM4018]
          Length = 154

 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 6/53 (11%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKN 50
           +N+  +   A   R++ V+ N++N  T     G  ++  +V F +V+ A  N
Sbjct: 6  GYNVATSGMSAQRTRINVVSANIANAKTTHTAEGGPYKKQEVVFEDVLVANTN 58



 Score = 42.5 bits (98), Expect = 0.056,   Method: Composition-based stats.
 Identities = 7/47 (14%), Positives = 20/47 (42%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           G++   + N + EM  +I   + + +  T  + +     + +  + S
Sbjct: 108 GYVAYPDINPVIEMVNLIEAMRSYEANVTSFNTHRGIDSKTLEILNS 154


>gi|229826300|ref|ZP_04452369.1| hypothetical protein GCWU000182_01672 [Abiotrophia defectiva ATCC
           49176]
 gi|229789170|gb|EEP25284.1| hypothetical protein GCWU000182_01672 [Abiotrophia defectiva ATCC
           49176]
          Length = 147

 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 23/42 (54%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N N++ EM  MI  T+ + +  T  +  +  +L+A+
Sbjct: 100 GYVTYPNVNTVQEMTDMIDATRSYEANVTAFNATKNMILKAL 141



 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 6/46 (13%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43
          + +I      A + R   +A N++N +T     G  +R   V F+E
Sbjct: 6  AMDISATGMTAQQLRTDVIAQNIANINTTRDQNGNVYRRKNVVFTE 51


>gi|302390139|ref|YP_003825960.1| flagellar hook-associated protein FlgK [Thermosediminibacter
          oceani DSM 16646]
 gi|302200767|gb|ADL08337.1| flagellar hook-associated protein FlgK [Thermosediminibacter
          oceani DSM 16646]
          Length = 465

 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 24/68 (35%), Gaps = 3/68 (4%)

Query: 1  MQTSFN---IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS 57
          M +SF    I   A  A ++    V+ N++N +T G+   +             +     
Sbjct: 1  MYSSFFGIEIAKRALFAQQRAQENVSHNVANANTPGYSRQRPVMEATYTKPWAGMYTAAG 60

Query: 58 FVASGKEY 65
           V +G   
Sbjct: 61 AVQAGTGV 68



 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 18/41 (43%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S+ +   EM +MI     +N+   +I   ++ +   +  + 
Sbjct: 421 SSVSLDEEMSRMIMYQHAYNAAARMITAIDEMLDTIVSRMG 461


>gi|237731005|ref|ZP_04561486.1| flagellar basal body rod protein FlgC [Citrobacter sp. 30_2]
 gi|226906544|gb|EEH92462.1| flagellar basal body rod protein FlgC [Citrobacter sp. 30_2]
          Length = 134

 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 6/43 (13%), Positives = 22/43 (51%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G+++  N + + EM   +  ++ + +   +++  +  ML+ + 
Sbjct: 89  GYVKMPNVDVVGEMVNTMSASRSYQANVEVLNTVKSLMLKTLT 131



 Score = 37.5 bits (85), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 6/47 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFS 42
             F+I  +A  A  +RL+  A NM+N D+V       +R  +V F 
Sbjct: 4  LNIFDIAGSALTAQSKRLNVAASNMANADSVSGPDGQPYRAKQVVFQ 50


>gi|254524155|ref|ZP_05136210.1| flagellar hook-associated protein FlgK [Stenotrophomonas sp.
          SKA14]
 gi|219721746|gb|EED40271.1| flagellar hook-associated protein FlgK [Stenotrophomonas sp.
          SKA14]
          Length = 626

 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 25/50 (50%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50
          M +  + G  A LA ++ L+T + N++N +T G+   KV F+        
Sbjct: 1  MSSVLSTGTGALLAFQRALATTSHNVANLNTPGYSRQKVNFATADPQNYG 50



 Score = 41.8 bits (96), Expect = 0.077,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 15/39 (38%)

Query: 200 EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           E S  N   E   M+ L Q + + + LI   +      +
Sbjct: 583 EVSGVNLDEEAADMLRLQQAYQAASQLISTADSMFQTIL 621


>gi|329890330|ref|ZP_08268673.1| flagellar hook-associated protein FlgK [Brevundimonas diminuta
          ATCC 11568]
 gi|328845631|gb|EGF95195.1| flagellar hook-associated protein FlgK [Brevundimonas diminuta
          ATCC 11568]
          Length = 735

 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 19/42 (45%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
           +  NI  +   A + +L  V+DN+SN +T G+         
Sbjct: 4  NSIMNIATSGMNAAQTQLRVVSDNVSNVNTPGYVRKIADQQS 45



 Score = 36.4 bits (82), Expect = 4.0,   Method: Composition-based stats.
 Identities = 6/30 (20%), Positives = 11/30 (36%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
            N   E+  M    Q FN+   ++   +  
Sbjct: 697 VNLDEELVLMTTYQQAFNASARMVQAAKDM 726


>gi|315636296|ref|ZP_07891546.1| flagellar basal-body rod protein FlgC [Arcobacter butzleri JV22]
 gi|315479385|gb|EFU70068.1| flagellar basal-body rod protein FlgC [Arcobacter butzleri JV22]
          Length = 154

 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 6/53 (11%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKN 50
           +N+  +   A   R++ V+ N++N  T     G  ++  +V F +V+ A  N
Sbjct: 6  GYNVATSGMSAQRTRINVVSANIANAKTTHTAEGGPYKKQEVVFEDVLVANTN 58



 Score = 42.2 bits (97), Expect = 0.058,   Method: Composition-based stats.
 Identities = 7/47 (14%), Positives = 20/47 (42%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           G++   + N + EM  +I   + + +  T  + +     + +  + S
Sbjct: 108 GYVAYPDINPVIEMVNLIEAMRSYEANVTSFNTHRGIDSKTLEILNS 154


>gi|99082804|ref|YP_614958.1| flagellar basal body rod protein FlgC [Ruegeria sp. TM1040]
 gi|99039084|gb|ABF65696.1| Flagellar basal-body rod protein flgC [Ruegeria sp. TM1040]
          Length = 130

 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 23/42 (54%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44
           S ++  +   A   RL+ V++N+SN DT G+R   V F  V
Sbjct: 6  KSLSVTASGLRAQAARLTHVSENISNADTPGYRRKTVSFQSV 47



 Score = 44.1 bits (102), Expect = 0.019,   Method: Composition-based stats.
 Identities = 7/37 (18%), Positives = 15/37 (40%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           G  E SN + M E+       + + +   + D+  + 
Sbjct: 84  GHYEGSNVDLMIEIADAREAQRTYEANLKMFDQTRQM 120


>gi|308185345|ref|YP_003929478.1| flagellar basal body rod protein FlgC [Helicobacter pylori SJM180]
 gi|308061265|gb|ADO03161.1| flagellar basal body rod protein FlgC [Helicobacter pylori SJM180]
          Length = 161

 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 19/44 (43%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            +G++   N N++ EM  ++  T+ + +        +     AI
Sbjct: 113 AQGYVAYPNVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAI 156



 Score = 39.5 bits (90), Expect = 0.40,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 6/49 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44
           +SF+I      A   R + ++ N++N +T     G  +R  +  F   
Sbjct: 3  LSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFRAF 51


>gi|308173581|ref|YP_003920286.1| flagellar component of cell-proximal portion of basal-body rod
           [Bacillus amyloliquefaciens DSM 7]
 gi|307606445|emb|CBI42816.1| flagellar component of cell-proximal portion of basal-body rod
           [Bacillus amyloliquefaciens DSM 7]
 gi|328553487|gb|AEB23979.1| flagellar basal body rod protein FlgC [Bacillus amyloliquefaciens
           TA208]
 gi|328911722|gb|AEB63318.1| flagellar component of cell-proximal portion of basal-body rod
           [Bacillus amyloliquefaciens LL3]
          Length = 150

 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 44/112 (39%), Gaps = 4/112 (3%)

Query: 131 IQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS 190
             +P + ++ ++   GE           G+ S               + N+   P    +
Sbjct: 42  EWVPYRRKLVSLQSGGESFSSLLNSKMNGIGSAGNGVKVSAVTEDPSAFNLVYDPENPDA 101

Query: 191 GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
               K G+++  N + + EM  ++  T+ + +  T ++ ++  +L+A+  I 
Sbjct: 102 N---KDGYVQKPNVDPLKEMVDLVSSTRSYEANVTALNASKGMLLKAL-EIG 149



 Score = 46.0 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 36/114 (31%), Gaps = 17/114 (14%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTV------G----FRTIKV-------KFSEVV 45
            S NI  +A  A   R+  V+ N++N DT       G    +R   V        FS ++
Sbjct: 5   QSLNISGSALTAQRVRMDVVSSNLANMDTTRAKQVNGEWVPYRRKLVSLQSGGESFSSLL 64

Query: 46  GAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
            +  N I    + V            + +      D   +G        P   +
Sbjct: 65  NSKMNGIGSAGNGVKVSAVTEDPSAFNLVYDPENPDANKDGYVQKPNVDPLKEM 118


>gi|297380732|gb|ADI35619.1| flagellar basal-body rod protein FlgC [Helicobacter pylori v225d]
          Length = 161

 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 19/44 (43%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            +G++   N N++ EM  ++  T+ + +        +     AI
Sbjct: 113 AQGYVAYPNVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAI 156



 Score = 39.1 bits (89), Expect = 0.53,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 6/49 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44
           +SF+I      A   R + ++ N++N +T     G  +R  +  F   
Sbjct: 3  LSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFKAF 51


>gi|261838846|gb|ACX98612.1| flagellar basal-body rod protein [Helicobacter pylori 51]
          Length = 161

 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 19/44 (43%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            +G++   N N++ EM  ++  T+ + +        +     AI
Sbjct: 113 AQGYVAYPNVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAI 156



 Score = 39.1 bits (89), Expect = 0.53,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 6/49 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44
           +SF+I      A   R + ++ N++N +T     G  +R  +  F   
Sbjct: 3  LSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFKAF 51


>gi|261407986|ref|YP_003244227.1| flagellar basal-body rod protein FlgC [Paenibacillus sp. Y412MC10]
 gi|329929277|ref|ZP_08283030.1| flagellar basal-body rod protein FlgC [Paenibacillus sp. HGF5]
 gi|261284449|gb|ACX66420.1| flagellar basal-body rod protein FlgC [Paenibacillus sp. Y412MC10]
 gi|328936646|gb|EGG33089.1| flagellar basal-body rod protein FlgC [Paenibacillus sp. HGF5]
          Length = 149

 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 23/42 (54%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N +   EM  M+  T+ + +  T I+ ++  +++A+
Sbjct: 104 GYVFMPNVDITKEMVDMLAATRSYEANVTAINASKAMIMKAL 145



 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 35/113 (30%), Gaps = 16/113 (14%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTV------G----FRTIKVKFS------EVVG 46
            SF I  +A  A   R+  ++ N++N +T       G    +R   V F       E + 
Sbjct: 5   NSFGINASALTAQRLRMDVISSNIANAETTRARIENGQAVPYRRKTVVFQPQQESFEGLL 64

Query: 47  AIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
             + +       V   +    +     +   T  D   EG  +         +
Sbjct: 65  RAQMNGQNAGQGVKVAQVREDQSPLKQVYNPTHPDANAEGYVFMPNVDITKEM 117


>gi|146296277|ref|YP_001180048.1| flagellar basal-body rod protein FlgB [Caldicellulosiruptor
          saccharolyticus DSM 8903]
 gi|145409853|gb|ABP66857.1| flagellar basal-body rod protein FlgB [Caldicellulosiruptor
          saccharolyticus DSM 8903]
          Length = 137

 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 26/61 (42%)

Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76
          +R   +++N++N DT G++   + F   + A  ND +         +   +++     + 
Sbjct: 20 KRNEVISNNIANADTPGYKAKDLNFKAFLQAYLNDQNNLELITTDKRHIKAEQSSGTSTK 79

Query: 77 G 77
           
Sbjct: 80 D 80


>gi|308064340|gb|ADO06227.1| flagellar basal body rod protein FlgC [Helicobacter pylori Sat464]
          Length = 161

 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 19/44 (43%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            +G++   N N++ EM  ++  T+ + +        +     AI
Sbjct: 113 AQGYVAYPNVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAI 156



 Score = 39.1 bits (89), Expect = 0.55,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 6/49 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44
           +SF+I      A   R + ++ N++N +T     G  +R  +  F   
Sbjct: 3  LSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFKAF 51


>gi|144900468|emb|CAM77332.1| Flagellar basal-body rod protein FlgC [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 137

 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 7/46 (15%), Positives = 20/46 (43%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G++   N N + EM  M    + + +   +I+ + + +   +  + 
Sbjct: 91  GYVLAPNVNPLIEMMDMREAQRSYEANMNVINSSRQLLSRTVEMLR 136



 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 27/83 (32%), Gaps = 9/83 (10%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTD--------TVGFRTIKVKFSEVVGAIKNDID 53
          Q +  I ++   A  +RL  +++N++N D        T  ++   V F   +        
Sbjct: 5  QKASKIAISGMKAQSERLRVISENLANADSLARTPDGTP-YKRKVVTFKSELDRANGYTG 63

Query: 54 QKISFVASGKEYLSKEVGSFIST 76
           K+  V        +        
Sbjct: 64 VKVDKVRPDASEFQRRYDPKHPA 86


>gi|118444348|ref|YP_877945.1| flagellar hook-associated protein 1 [Clostridium novyi NT]
 gi|118134804|gb|ABK61848.1| flagellar hook-associated protein 1 [Clostridium novyi NT]
          Length = 676

 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 11/90 (12%), Positives = 32/90 (35%), Gaps = 4/90 (4%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV----VGAIKNDIDQKISF 58
          ++ N+G     A +  L   + N++N++T G+   +          + ++ N +      
Sbjct: 6  STLNVGKRGLYAQQGALDVTSHNIANSNTKGYTRQRALMETTRPFGMPSMDNQVGPGQIG 65

Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDA 88
                 + +   +F+      + +  G  
Sbjct: 66 TGVEISKIQRVRDTFMDYQVRRETSTLGQY 95



 Score = 46.0 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 5/40 (12%), Positives = 15/40 (37%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           S  +   EM  ++     + +   +I   ++ +   I  +
Sbjct: 635 SGVSLNEEMANIVQYQHAYQANAKIIATTDQLLDVVINGL 674


>gi|310816827|ref|YP_003964791.1| flagellar basal-body rod protein FlgC [Ketogulonicigenium vulgare
          Y25]
 gi|308755562|gb|ADO43491.1| flagellar basal-body rod protein FlgC [Ketogulonicigenium vulgare
          Y25]
          Length = 127

 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 18/39 (46%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
           +I  +   A   R+   ++N++N DT G+    V F  
Sbjct: 8  LSIAASGMQAQASRMRFTSENIANADTPGYHRKLVSFRA 46



 Score = 37.5 bits (85), Expect = 1.6,   Method: Composition-based stats.
 Identities = 5/47 (10%), Positives = 18/47 (38%)

Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           +G    SN + + E+      ++ + +   + D+  +     +  + 
Sbjct: 80  QGNYSGSNVDLLIEIADAREASRSYEANLKVFDQVRQMSTSLLDLLR 126


>gi|283833632|ref|ZP_06353373.1| flagellar basal-body rod protein FlgC [Citrobacter youngae ATCC
           29220]
 gi|291071315|gb|EFE09424.1| flagellar basal-body rod protein FlgC [Citrobacter youngae ATCC
           29220]
          Length = 134

 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 6/43 (13%), Positives = 22/43 (51%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G+++  N + + EM   +  ++ + +   +++  +  ML+ + 
Sbjct: 89  GYVKMPNVDVVGEMVNTMSASRSYQANVEVLNTVKSLMLKTLT 131



 Score = 38.3 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 6/47 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42
             F+I  +A  A  +RL+  A NM+N     G     +R  +V F 
Sbjct: 4  LNIFDIAGSALTAQSKRLNVAASNMANADSVTGPDGQPYRAKQVVFQ 50


>gi|259417635|ref|ZP_05741554.1| flagellar basal-body rod protein FlgC [Silicibacter sp.
          TrichCH4B]
 gi|259346541|gb|EEW58355.1| flagellar basal-body rod protein FlgC [Silicibacter sp.
          TrichCH4B]
          Length = 130

 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 23/42 (54%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44
           S ++  +   A   RL+ V++N+SN DT G+R   V F  V
Sbjct: 6  KSLSVTASGLRAQAARLTHVSENISNADTPGYRRKTVSFQAV 47



 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 7/37 (18%), Positives = 15/37 (40%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           G  E SN + M E+       + + +   + D+  + 
Sbjct: 84  GHYEGSNVDLMIEIADAREAQRTYEANLKMFDQTRQM 120


>gi|255654320|ref|ZP_05399729.1| putative flagellar hook-associated protein [Clostridium difficile
           QCD-23m63]
          Length = 315

 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 6/40 (15%), Positives = 17/40 (42%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           S  +   EM ++I + + + +   ++    + +   I  I
Sbjct: 275 SGVSLDEEMTELIKIQRSYQASAKVMSTAVQLLDVVINGI 314


>gi|312884828|ref|ZP_07744520.1| flagellar hook-associated protein FlgK [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309367480|gb|EFP95040.1| flagellar hook-associated protein FlgK [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 457

 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 39/128 (30%), Gaps = 1/128 (0%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
               NIGL    A    L   A N++N +T G+   +   +  VG  K+D     + V  
Sbjct: 1   MNLVNIGLTGLNASRVALDVTAQNVANINTPGYSRQQALMAS-VGGPKHDKLSAGAGVEV 59

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
                  +      T      A   + +    S     L  DG    T      +A    
Sbjct: 60  PSIRRISDEFLVKQTWQTNSIASYAERYTTNFSQLENTLKADGFSISTGLDKFFNALNDA 119

Query: 122 PVLDMASV 129
            V   ++ 
Sbjct: 120 SVTPDSTP 127


>gi|210135737|ref|YP_002302176.1| flagellar basal body rod protein FlgC [Helicobacter pylori P12]
 gi|210133705|gb|ACJ08696.1| flagellar basal-body rod protein FlgC [Helicobacter pylori P12]
          Length = 161

 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 19/44 (43%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            +G++   N N++ EM  ++  T+ + +        +     AI
Sbjct: 113 AQGYVAYPNVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAI 156



 Score = 39.1 bits (89), Expect = 0.56,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 6/49 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44
           +SF+I      A   R + ++ N++N +T     G  +R  +  F   
Sbjct: 3  LSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFKAF 51


>gi|217059|dbj|BAA02862.1| FlgC [Salmonella enterica subsp. enterica serovar Typhimurium]
 gi|581758|emb|CAA36310.1| unnamed protein product [Salmonella enterica subsp. enterica
           serovar Typhimurium]
          Length = 134

 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 6/43 (13%), Positives = 22/43 (51%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G+++  N + + EM   +  ++ + +   +++  +  ML+ + 
Sbjct: 89  GYVKMPNVDVVGEMVNTMSASRTYQANIEVLNTVKSMMLKTLT 131



 Score = 38.3 bits (87), Expect = 0.91,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 6/47 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42
             F+I  +A  A  +RL+  A N++N     G     +R  +V F 
Sbjct: 4  LNIFDIAGSALAAQSKRLNVAASNLANADSVTGPDGQPYRAKQVVFQ 50


>gi|307747446|gb|ADN90716.1| Flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni M1]
          Length = 164

 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 8/46 (17%), Positives = 19/46 (41%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G++   N N + EM  +I  T+ + +  +     +     A+  + 
Sbjct: 118 GYVAYPNVNPVIEMADLIEATRAYQANVSAFTSAKTIAQSAVDLLR 163



 Score = 43.3 bits (100), Expect = 0.031,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 18/39 (46%), Gaps = 6/39 (15%)

Query: 11 AQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43
             A   R++ ++ N++N +T     G  +R  +V F  
Sbjct: 13 GLSAQRFRMNVISSNIANANTTRTAEGGPYRRREVIFKA 51


>gi|260222474|emb|CBA32074.1| hypothetical protein Csp_D30300 [Curvibacter putative symbiont of
          Hydra magnipapillata]
          Length = 656

 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 21/51 (41%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
           +  NIG  A  A +  L T  +N++N +T G+    V    V G      
Sbjct: 1  MSILNIGTRALQANQIALQTAGNNIANVNTPGYSRQNVVLKAVEGQFSGGG 51



 Score = 42.9 bits (99), Expect = 0.041,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 15/41 (36%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E  ++I   Q + +   +I   +      I+ + 
Sbjct: 615 SGVNLDEEAAKLIQFQQAYQASAKMIQIAQNIFDTLIQGLG 655


>gi|296135666|ref|YP_003642908.1| flagellar hook-associated protein FlgK [Thiomonas intermedia K12]
 gi|295795788|gb|ADG30578.1| flagellar hook-associated protein FlgK [Thiomonas intermedia K12]
          Length = 667

 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 18/47 (38%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51
           N  L    A +  L    +N++N +T G+       S +  ++   
Sbjct: 8  LNNALTGLQAAQSALQVTGNNIANVNTPGYSRETAVQSTLTPSLYGG 54


>gi|150390490|ref|YP_001320539.1| flagellar basal-body rod protein FlgB [Alkaliphilus
          metalliredigens QYMF]
 gi|149950352|gb|ABR48880.1| flagellar basal-body rod protein FlgB [Alkaliphilus
          metalliredigens QYMF]
          Length = 136

 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 10/55 (18%), Positives = 21/55 (38%), Gaps = 4/55 (7%)

Query: 1  MQTSFNIGL----AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51
          M       +    +A  A   R   +++N++N +T  F+   V+F   +      
Sbjct: 1  MTNGLYSNINLLNSAMSASWVRNEAISNNIANANTPNFKKSTVEFETHLKNALQG 55


>gi|88813660|ref|ZP_01128889.1| hypothetical protein NB231_05371 [Nitrococcus mobilis Nb-231]
 gi|88789078|gb|EAR20216.1| hypothetical protein NB231_05371 [Nitrococcus mobilis Nb-231]
          Length = 652

 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/83 (14%), Positives = 29/83 (34%), Gaps = 3/83 (3%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M   F+  ++  LA ++ ++T A N++N +T G+   +    E+      +         
Sbjct: 1  MGDLFDNSISGLLAFQRAINTTAHNIANVNTAGYSRQRT---ELTARAPTEFGNGFVGNG 57

Query: 61 SGKEYLSKEVGSFISTGTELDFA 83
                ++          +   A
Sbjct: 58 VQAASTNRLFNQTRQVAVQTSSA 80


>gi|291280513|ref|YP_003497348.1| flagellar hook-associated protein 1 FlgK [Deferribacter
           desulfuricans SSM1]
 gi|290755215|dbj|BAI81592.1| flagellar hook-associated protein 1 FlgK [Deferribacter
           desulfuricans SSM1]
          Length = 584

 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 4/40 (10%), Positives = 13/40 (32%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
            +   E   +I   + + +    I   ++ +   I    +
Sbjct: 542 VSLDEEFTNLIKFQKAYEANARFITAVDEMLDRLINGTGT 581



 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 6/39 (15%), Positives = 17/39 (43%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
          F  G++  +  +  +     N++N +T G+   ++    
Sbjct: 8  FQTGVSGLMVSQAGIDVTGHNIANVNTEGYSRQRLSIET 46


>gi|238793996|ref|ZP_04637614.1| Flagellar basal-body rod protein flgC [Yersinia intermedia ATCC
           29909]
 gi|238726628|gb|EEQ18164.1| Flagellar basal-body rod protein flgC [Yersinia intermedia ATCC
           29909]
          Length = 134

 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 20/43 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N +   EM   I  ++ + +   +++  +  ML+ + 
Sbjct: 89  GYVRMPNVDVTGEMINTISASRSYQANVEVLNTTKSLMLKTLT 131



 Score = 38.3 bits (87), Expect = 1.0,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 26/80 (32%), Gaps = 6/80 (7%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSEVVGAIKNDIDQK 55
             F+I  +A  A  QRL+  A NM+N     G     +R  +V F       +     +
Sbjct: 4  LNIFDIAGSALSAQSQRLNVSASNMANADSVTGPDGQPYRAKQVVFQVAAQPGQETGGVR 63

Query: 56 ISFVASGKEYLSKEVGSFIS 75
          +S +                
Sbjct: 64 VSQIVDDPAPDRLVYQPGNP 83


>gi|15612531|ref|NP_224184.1| flagellar basal body rod protein FlgC [Helicobacter pylori J99]
 gi|4156087|gb|AAD07040.1| FLAGELLAR BASAL-BODY ROD PROTEIN [Helicobacter pylori J99]
          Length = 161

 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 19/44 (43%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            +G++   N N++ EM  ++  T+ + +        +     AI
Sbjct: 113 AQGYVAYPNVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAI 156



 Score = 39.5 bits (90), Expect = 0.43,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 6/49 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44
           +SF+I      A   R + ++ N++N +T     G  +R  +  F   
Sbjct: 3  LSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFRAF 51


>gi|300854206|ref|YP_003779190.1| flagellar basal-body rod protein FlgC [Clostridium ljungdahlii DSM
           13528]
 gi|300434321|gb|ADK14088.1| flagellar basal-body rod protein FlgC [Clostridium ljungdahlii DSM
           13528]
          Length = 143

 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 21/44 (47%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
             G++   N N + EM  M+  T+ + +  + I+  +    +A+
Sbjct: 96  ASGYVSMPNVNILNEMADMMVATRAYEANLSAINSEKSMFSKAL 139



 Score = 42.2 bits (97), Expect = 0.069,   Method: Composition-based stats.
 Identities = 17/88 (19%), Positives = 28/88 (31%), Gaps = 9/88 (10%)

Query: 1  MQTSFNI---GLAAQLALEQRLSTVADNMSNTDTV-G-----FRTIKVKFSEVVGAIKND 51
          M  +FN      +   A    + T+A NM+N +T  G     +R     F E +    + 
Sbjct: 1  MIQAFNTMRISASGLSAERLSMDTIASNMANAETTRGADGQPYRRKVAVFGENLSKALDS 60

Query: 52 IDQKISFVASGKEYLSKEVGSFISTGTE 79
                     K    K+  S      +
Sbjct: 61 NGNYGDVPEGVKVVAIKDDTSPFKREYD 88


>gi|262396029|ref|YP_003287882.1| flagellar hook-associated protein FlgK [Vibrio sp. Ex25]
 gi|262339623|gb|ACY53417.1| flagellar hook-associated protein FlgK [Vibrio sp. Ex25]
          Length = 457

 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 27/88 (30%), Gaps = 1/88 (1%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
              NI L+   A    L   A N++N +TVG+   +   + V     N +      V  
Sbjct: 1  MNLVNIALSGLGANRVALDVTAQNVANVNTVGYSRQQALMASVDDGKANRLSP-GLGVEV 59

Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAW 89
                 +      T +    A     +
Sbjct: 60 TSIRRVTDQFLIKQTWSTNSMAAYASGY 87


>gi|170725961|ref|YP_001759987.1| flagellar hook-associated protein FlgK [Shewanella woodyi ATCC
          51908]
 gi|169811308|gb|ACA85892.1| flagellar hook-associated protein FlgK [Shewanella woodyi ATCC
          51908]
          Length = 637

 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 22/51 (43%), Gaps = 1/51 (1%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51
          M    NI     LA + +L+  ++N++N +T G+     + S +       
Sbjct: 3  MD-LLNIARTGVLASQSQLAVTSNNIANANTQGYHRQVAEQSSLDNQRLGG 52



 Score = 37.2 bits (84), Expect = 2.2,   Method: Composition-based stats.
 Identities = 6/41 (14%), Positives = 14/41 (34%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E G +I   Q + +   ++    +       ++ 
Sbjct: 597 SGVNLDEEAGNLIRFQQAYQASARIMTTASEIFDTLFSSVR 637


>gi|188589591|ref|YP_001920169.1| flagellar hook-associated protein FlgK [Clostridium botulinum E3
           str. Alaska E43]
 gi|251779172|ref|ZP_04822092.1| flagellar hook-associated protein FlgK [Clostridium botulinum E1
           str. 'BoNT E Beluga']
 gi|188499872|gb|ACD53008.1| flagellar hook-associated protein FlgK [Clostridium botulinum E3
           str. Alaska E43]
 gi|243083487|gb|EES49377.1| flagellar hook-associated protein FlgK [Clostridium botulinum E1
           str. 'BoNT E Beluga']
          Length = 604

 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 18/48 (37%), Gaps = 5/48 (10%)

Query: 199 LED-----SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           LE      S  +   EM  +I     +++   +I   ++ +   I  +
Sbjct: 555 LEMQRLSVSGVSLDEEMTNLIQFQHAYSANAKVISTVDELLDVVINGL 602



 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 7/34 (20%), Positives = 16/34 (47%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
          +        +  ++T + N++N +TVGF   +  
Sbjct: 10 VAKRGLNVQQGAINTTSHNIANANTVGFSRQRAV 43


>gi|146281777|ref|YP_001171930.1| flagellar hook-associated protein FlgK [Pseudomonas stutzeri
          A1501]
 gi|145569982|gb|ABP79088.1| flagellar hook-associated protein FlgK [Pseudomonas stutzeri
          A1501]
          Length = 669

 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 22/40 (55%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
          M +  +IGL+   A +  L+T  +N++N DT G+    V 
Sbjct: 1  MASLISIGLSGLSASQTALATTGNNIANVDTAGYSRQSVV 40



 Score = 38.3 bits (87), Expect = 0.84,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 14/40 (35%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           S  N   E   +I   Q + +   +I   ++     I  +
Sbjct: 630 SGVNLDEEAANLIKFQQYYTAAAQVIKAAQQMFDTIINTL 669


>gi|158320510|ref|YP_001513017.1| flagellar basal-body rod protein FlgC [Alkaliphilus oremlandii
           OhILAs]
 gi|158140709|gb|ABW19021.1| flagellar basal-body rod protein FlgC [Alkaliphilus oremlandii
           OhILAs]
          Length = 147

 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 22/42 (52%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G+++  N + M EM  MI  ++ + +  T ++  +   L+ +
Sbjct: 102 GYVKMPNVDIMTEMANMISASRAYEANITAMNGTKSMFLKTL 143



 Score = 43.3 bits (100), Expect = 0.030,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 18/47 (38%), Gaps = 6/47 (12%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43
           S NI  +   A   R+     N++N +T     G  +R   V F  
Sbjct: 5  NSLNISASGLTAERLRMDIATKNIANANTTRTSNGTPYRRQVVVFKT 51


>gi|28869138|ref|NP_791757.1| flagellar basal-body rod protein FlgC [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|66046709|ref|YP_236550.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           syringae B728a]
 gi|71737330|ref|YP_275565.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|213967584|ref|ZP_03395732.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           tomato T1]
 gi|237799204|ref|ZP_04587665.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|237806223|ref|ZP_04592927.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|257484951|ref|ZP_05638992.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           tabaci ATCC 11528]
 gi|289627761|ref|ZP_06460715.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|289651649|ref|ZP_06482992.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           aesculi str. 2250]
 gi|298487859|ref|ZP_07005899.1| Flagellar basal-body rod protein flgC [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|301385711|ref|ZP_07234129.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           tomato Max13]
 gi|302060077|ref|ZP_07251618.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           tomato K40]
 gi|302134836|ref|ZP_07260826.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           tomato NCPPB 1108]
 gi|302185585|ref|ZP_07262258.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           syringae 642]
 gi|28852378|gb|AAO55452.1| flagellar basal-body rod protein FlgC [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|63257416|gb|AAY38512.1| Flagellar basal-body rod protein FlgC [Pseudomonas syringae pv.
           syringae B728a]
 gi|71557883|gb|AAZ37094.1| flagellar basal-body rod protein FlgC [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|213927885|gb|EEB61432.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           tomato T1]
 gi|298157584|gb|EFH98664.1| Flagellar basal-body rod protein flgC [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|320325091|gb|EFW81160.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           glycinea str. B076]
 gi|320329350|gb|EFW85343.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330866420|gb|EGH01129.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           aesculi str. 0893_23]
 gi|330875981|gb|EGH10130.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
 gi|330880520|gb|EGH14669.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330889087|gb|EGH21748.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           mori str. 301020]
 gi|330899399|gb|EGH30818.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           japonica str. M301072PT]
 gi|330943205|gb|EGH45612.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           pisi str. 1704B]
 gi|330953719|gb|EGH53979.1| flagellar basal body rod protein FlgC [Pseudomonas syringae Cit 7]
 gi|330961194|gb|EGH61454.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           maculicola str. ES4326]
 gi|330967088|gb|EGH67348.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           actinidiae str. M302091]
 gi|330972411|gb|EGH72477.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           aceris str. M302273PT]
 gi|330975974|gb|EGH76040.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           aptata str. DSM 50252]
 gi|330986466|gb|EGH84569.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           lachrymans str. M301315]
 gi|331011040|gb|EGH91096.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           tabaci ATCC 11528]
 gi|331017028|gb|EGH97084.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
 gi|331022059|gb|EGI02116.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331027336|gb|EGI07391.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 146

 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 30/73 (41%), Gaps = 6/73 (8%)

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
            G +   ++  +   P  P  D      K G++   N N + EM  MI  ++ F +   +
Sbjct: 77  NGIIEDSSNLEARYEPNHPSAD------KDGYVYYPNVNVVEEMADMISASRSFQTNAEI 130

Query: 227 IDENEKSMLEAIR 239
           ++  +  M + + 
Sbjct: 131 MNTAKSMMQKVLT 143



 Score = 40.2 bits (92), Expect = 0.26,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 6/58 (10%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQ 54
            FNI  +A  A   RL+T A N++N +TV       +R     F+ V+   ++    
Sbjct: 5  NVFNIAGSAMSAQTTRLNTTASNIANAETVSSSMDQTYRARHPVFATVMQGQQSTGGS 62


>gi|330830305|ref|YP_004393257.1| flagellar basal-body rod protein FlgC [Aeromonas veronii B565]
 gi|328805441|gb|AEB50640.1| Flagellar basal-body rod protein FlgC [Aeromonas veronii B565]
          Length = 139

 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 23/43 (53%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           GF+   N N + EM  MI+ ++ + +   + D  +K + + ++
Sbjct: 93  GFIFKPNVNMVEEMADMINASRSYQTNVQVADSAKKMLQQTLQ 135



 Score = 36.4 bits (82), Expect = 3.6,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 6/55 (10%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKND 51
            F+I  +A  A   RL+TVA NM+N D+V       +   +  F+  +    +D
Sbjct: 5  KVFDIAGSAMSAQSVRLNTVASNMANADSVSSSVENTYHARRPVFAAQLDQAMSD 59


>gi|208435438|ref|YP_002267104.1| flagellar basal-body rod protein [Helicobacter pylori G27]
 gi|308183713|ref|YP_003927840.1| flagellar basal body rod protein FlgC [Helicobacter pylori PeCan4]
 gi|208433367|gb|ACI28238.1| flagellar basal-body rod protein [Helicobacter pylori G27]
 gi|308065898|gb|ADO07790.1| flagellar basal body rod protein FlgC [Helicobacter pylori PeCan4]
          Length = 161

 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 19/44 (43%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            +G++   N N++ EM  ++  T+ + +        +     AI
Sbjct: 113 AQGYVAYPNVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAI 156



 Score = 39.5 bits (90), Expect = 0.44,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 6/49 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44
           +SF+I      A   R + ++ N++N +T     G  +R  +  F   
Sbjct: 3  LSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFRAF 51


>gi|332088752|gb|EGI93864.1| flagellar basal-body rod protein FlgC [Shigella boydii 5216-82]
          Length = 134

 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 6/40 (15%), Positives = 21/40 (52%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           G+++  N + + EM   +  ++ + +   +++  +  ML+
Sbjct: 89  GYVKMPNVDVVGEMVNTMSASRSYQANVEVLNTVKSMMLK 128



 Score = 39.1 bits (89), Expect = 0.60,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 6/47 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42
             F+I  +A  A  QRL+  A N++N     G     +R  +V F 
Sbjct: 4  LNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRAKQVVFQ 50


>gi|170768138|ref|ZP_02902591.1| flagellar basal-body rod protein FlgC [Escherichia albertii
           TW07627]
 gi|170122904|gb|EDS91835.1| flagellar basal-body rod protein FlgC [Escherichia albertii
           TW07627]
          Length = 134

 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 11/89 (12%), Positives = 35/89 (39%)

Query: 148 ISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSM 207
              + K +      +   + G V+  +   S        E  + +   +G+++  N + +
Sbjct: 40  QPYRAKQVVFQVNAAPGAATGGVKVADVIESQAPDKWVYEPGNPLADAKGYVKMPNVDVV 99

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLE 236
            EM   +  ++ + +   +++  +  ML+
Sbjct: 100 GEMVNTMSASRSYQANVEVLNTVKSMMLK 128



 Score = 38.7 bits (88), Expect = 0.63,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 6/47 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42
             F+I  +A  A  QRL+  A N++N     G     +R  +V F 
Sbjct: 4  LNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRAKQVVFQ 50


>gi|229918625|ref|YP_002887271.1| flagellar basal-body rod protein FlgC [Exiguobacterium sp. AT1b]
 gi|229470054|gb|ACQ71826.1| flagellar basal-body rod protein FlgC [Exiguobacterium sp. AT1b]
          Length = 142

 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 6/41 (14%), Positives = 23/41 (56%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
           G+++  N + + EM  ++  T+ + +    ++ ++  +++A
Sbjct: 96  GYVQMPNVDLLKEMVDLMGATRSYEANIAAMNASKAMLVKA 136



 Score = 45.2 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 11/32 (34%), Positives = 18/32 (56%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32
          M  SF+I  +A  +   R+ TV+ N++N  T 
Sbjct: 3  MFDSFHISASALTSQRLRMDTVSANIANAQTT 34


>gi|158321541|ref|YP_001514048.1| flagellar hook-associated protein FlgK [Alkaliphilus oremlandii
           OhILAs]
 gi|158141740|gb|ABW20052.1| flagellar hook-associated protein FlgK [Alkaliphilus oremlandii
           OhILAs]
          Length = 522

 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/195 (11%), Positives = 51/195 (26%), Gaps = 17/195 (8%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKF-SEVVGAIKNDIDQKISFVASG 62
            F    +   A ++ L     N++N +T G+   +++        +        + V + 
Sbjct: 7   GFTTAKSGLFASQRALDITGHNLANVNTKGYSRQRLEQVQSTPLKLAGGQGMLGTGVDTT 66

Query: 63  KEYL------SKEVGSFISTGTELDFALEGDAWFALESPRG----------IILTRDGRF 106
             +         +     +     D   +G A+                   +       
Sbjct: 67  AIHQLRNEFLDYKYRDEATAFGYWDAKADGLAFIESIMNEPSDTGITKVIDQMFESFHEL 126

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
               +     A  +       +       + E   V    E+    K I T G     ++
Sbjct: 127 SKNPNNITTRALVRQRATTFTNSVNHTYNQLEKMVVDYNFEVQSMVKSINTYGEQIARLN 186

Query: 167 QGFVRRENSGISPNI 181
              +R E  G + N 
Sbjct: 187 DQILRFEVDGSNAND 201



 Score = 45.6 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 6/41 (14%), Positives = 16/41 (39%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  +   E+  M+     +N+   ++   ++ +   I  I 
Sbjct: 478 SGVSEDEELANMVKFQHAYNASARMMTTIDEMLDVLINRIG 518


>gi|254227989|ref|ZP_04921419.1| flagellar hook-associated protein FlgK [Vibrio sp. Ex25]
 gi|151939485|gb|EDN58313.1| flagellar hook-associated protein FlgK [Vibrio sp. Ex25]
          Length = 457

 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 27/88 (30%), Gaps = 1/88 (1%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
              NI L+   A    L   A N++N +TVG+   +   + V     N +      V  
Sbjct: 1  MNLVNIALSGLGANRVALDVTAQNVANVNTVGYSRQQALMASVDDGKANRLSP-GLGVEV 59

Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAW 89
                 +      T +    A     +
Sbjct: 60 TSIRRVTDQFLIKQTWSTNSMAAYASGY 87


>gi|95929847|ref|ZP_01312588.1| flagellar basal-body rod protein FlgC [Desulfuromonas acetoxidans
           DSM 684]
 gi|95134143|gb|EAT15801.1| flagellar basal-body rod protein FlgC [Desulfuromonas acetoxidans
           DSM 684]
          Length = 143

 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 23/47 (48%), Gaps = 1/47 (2%)

Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           +G++   N + + E   M+  T+ + +  T I   ++  L+A+  I 
Sbjct: 97  QGYVALPNIDLLKETTDMMLATRAYEANITTIKSAKRMALKAL-EIG 142



 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 8/50 (16%)

Query: 1  MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFS 42
          M   TS NI  +A  A   RL T++ NM+N +T     G  +R   V F 
Sbjct: 1  MDIFTSLNISSSALKAQRIRLDTISSNMANAETTRTPEGGPYRRKMVVFE 50


>gi|84514827|ref|ZP_01002190.1| FlgK flagellar hook-associated protein 1 [Loktanella
          vestfoldensis SKA53]
 gi|84510986|gb|EAQ07440.1| FlgK flagellar hook-associated protein 1 [Loktanella
          vestfoldensis SKA53]
          Length = 1421

 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 23/46 (50%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46
          M +  +IG +A  A  + L+    N+ N +T G+R      +EV G
Sbjct: 1  MASLLDIGRSAVQAQREALNVTGQNIVNANTEGYRRRDATLTEVYG 46


>gi|315497622|ref|YP_004086426.1| flagellar hook-associated protein flgk [Asticcacaulis excentricus
          CB 48]
 gi|315415634|gb|ADU12275.1| flagellar hook-associated protein FlgK [Asticcacaulis excentricus
          CB 48]
          Length = 718

 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 36/78 (46%), Gaps = 1/78 (1%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGF-RTIKVKFSEVVGAIKNDIDQKISFVA 60
           +  NIG +  +  + +L  V+DN+SN +T G+ R +  + + V+G+    +      +A
Sbjct: 4  NSILNIGASGLMTAQSQLRVVSDNISNVNTPGYIRKVGTQQASVIGSQGAGVMSGQVMLA 63

Query: 61 SGKEYLSKEVGSFISTGT 78
          + K      + +  S   
Sbjct: 64 ADKYLQQAAMRANSSASQ 81



 Score = 37.2 bits (84), Expect = 2.0,   Method: Composition-based stats.
 Identities = 5/36 (13%), Positives = 13/36 (36%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            N   E+  +    Q +++ + LI   ++       
Sbjct: 681 VNLDEELINLTTYQQAYSASSRLIQAAKEMYDVLFN 716


>gi|254470324|ref|ZP_05083728.1| flagellar basal-body rod protein FlgC [Pseudovibrio sp. JE062]
 gi|211960635|gb|EEA95831.1| flagellar basal-body rod protein FlgC [Pseudovibrio sp. JE062]
          Length = 136

 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 37/119 (31%), Gaps = 11/119 (9%)

Query: 1   MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGA-IKN 50
           M    S  I  +   A   R+  +A+N++N D+ G       +R     FS    A ++ 
Sbjct: 1   MDFIKSMFIAASGLKAQTGRMRVIAENIANADSTGQTPGEDPYRRKVPTFSSSFDAKVEA 60

Query: 51  DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109
           ++ +         E+  +      +   +    +         +      TR     + 
Sbjct: 61  ELVKLGRVREDKSEFKLRYEPDHPAANDKGYVKMPNVNTLVEMADMQEA-TRSYEANLN 118



 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 8/46 (17%), Positives = 22/46 (47%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G+++  N N++ EM  M   T+ + +   ++  +   M + +  + 
Sbjct: 90  GYVKMPNVNTLVEMADMQEATRSYEANLNVVKSSRSMMQKTLDILR 135


>gi|169831913|ref|YP_001717895.1| flagellar basal-body rod protein FlgC [Candidatus Desulforudis
          audaxviator MP104C]
 gi|169638757|gb|ACA60263.1| flagellar basal-body rod protein FlgC [Candidatus Desulforudis
          audaxviator MP104C]
          Length = 139

 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 30/88 (34%), Gaps = 7/88 (7%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKN-DIDQK 55
           SF I  +   A   RL  +++N++N  T     G  +R     F++ +   +       
Sbjct: 5  KSFGISGSGMTAERLRLDLISNNIANAHTTRTREGGPYRREVPVFAQYLERFRGRGFAGA 64

Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFA 83
             V +  +  S           + D A
Sbjct: 65 GVRVTAVVKDPSPLRAVHEPEHPDADAA 92



 Score = 44.1 bits (102), Expect = 0.019,   Method: Composition-based stats.
 Identities = 6/48 (12%), Positives = 20/48 (41%), Gaps = 1/48 (2%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
             GF++  N +   E   ++  ++ + +     D  ++ +  A+  + 
Sbjct: 91  AAGFVQYPNVDLNREFVDLMGASRAYEANAAAFDAAKQMVQRAL-ELG 137


>gi|307638243|gb|ADN80693.1| Flagellar basal-body rod protein [Helicobacter pylori 908]
 gi|325996836|gb|ADZ52241.1| Flagellar basal-body rod protein [Helicobacter pylori 2018]
 gi|325998428|gb|ADZ50636.1| Flagellar basal-body rod protein [Helicobacter pylori 2017]
          Length = 161

 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 19/44 (43%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            +G++   N N++ EM  ++  T+ + +        +     AI
Sbjct: 113 AQGYVAYPNVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAI 156



 Score = 39.5 bits (90), Expect = 0.45,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 6/49 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44
           +SF+I      A   R + ++ N++N +T     G  +R  +  F   
Sbjct: 3  LSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFRAF 51


>gi|126463750|ref|YP_001044864.1| flagellar basal body rod protein FlgC [Rhodobacter sphaeroides
          ATCC 17029]
 gi|332559806|ref|ZP_08414128.1| flagellar basal body rod protein FlgC2 [Rhodobacter sphaeroides
          WS8N]
 gi|126105414|gb|ABN78092.1| protein of unknown function DUF1078 domain protein [Rhodobacter
          sphaeroides ATCC 17029]
 gi|332277518|gb|EGJ22833.1| flagellar basal body rod protein FlgC2 [Rhodobacter sphaeroides
          WS8N]
          Length = 126

 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 20/42 (47%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
            S  +  +   +   RL  V++N++N DT G+    V F E
Sbjct: 5  LQSLGLSASGMRSQALRLRHVSENIANADTPGYHRKTVSFQE 46



 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 8/79 (10%), Positives = 25/79 (31%)

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223
           D   G V      +  +           +  + G+ + SN + + E+       + + + 
Sbjct: 47  DPDSGLVSTGPVRLDRSELQKIYAPGHPLAGEDGYYDGSNVDLVVEVADAREAQRSYEAN 106

Query: 224 TTLIDENEKSMLEAIRNIA 242
             + D+  +     +  + 
Sbjct: 107 LRMFDQARQMTQSLLDLLR 125


>gi|114706769|ref|ZP_01439669.1| flagellar basal-body rod protein C [Fulvimarina pelagi HTCC2506]
 gi|114537717|gb|EAU40841.1| flagellar basal-body rod protein C [Fulvimarina pelagi HTCC2506]
          Length = 138

 Score = 51.4 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/101 (13%), Positives = 32/101 (31%)

Query: 143 GEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDS 202
              G      K +              VR  + G       +  +  +    + G+++  
Sbjct: 38  DTPGADPYVRKTVTFGATLDEVTGANLVRVTDIGTDKADFESTYDPGNPAADENGYVKRP 97

Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           N N + EM  M    + + +   +I +  + +   I  + S
Sbjct: 98  NVNMLTEMMDMREANRSYEANIQVIKQAREIINMTIDLLRS 138



 Score = 45.6 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 22/55 (40%), Gaps = 7/55 (12%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKN 50
          +S  I  +   A   RL  V++N++N +T G       +    V F   +  +  
Sbjct: 7  SSLKIAASGMEAQSTRLRVVSENVANAETTGDTPGADPYVRKTVTFGATLDEVTG 61


>gi|326792655|ref|YP_004310476.1| flagellar hook-associated protein FlgK [Clostridium lentocellum DSM
           5427]
 gi|326543419|gb|ADZ85278.1| flagellar hook-associated protein FlgK [Clostridium lentocellum DSM
           5427]
          Length = 645

 Score = 51.0 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/155 (8%), Positives = 38/155 (24%), Gaps = 12/155 (7%)

Query: 100 LTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG 159
            +      +   G  +  +    +        +   ++        G   + G  +    
Sbjct: 489 YSTGSSTGMPATGEDLVGNNYSKMTATNITISKEIYENASNMRSTYGADEESGSDLFRAL 548

Query: 160 LYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLED------------SNANSM 207
               D S+ F   +      +I      +     + +   E             S  +  
Sbjct: 549 SNQKDNSKMFKEGDPKDYMASIFSELGINAQEALMYQSTQESVTGIIKNQRLSVSQVDLT 608

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            E   +I   Q + +   +++  +      I  + 
Sbjct: 609 EEFTSLIKYQQAYQASAKIMNTIDGIYETTIFKLG 643



 Score = 45.6 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 9/33 (27%), Positives = 18/33 (54%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTI 37
          FN+ L+   A ++ L   ++N++N  T G+   
Sbjct: 6  FNVALSGLFAAQRGLHVTSNNITNASTDGYSRQ 38


>gi|220934392|ref|YP_002513291.1| flagellar basal-body rod protein FlgC [Thioalkalivibrio sp.
           HL-EbGR7]
 gi|219995702|gb|ACL72304.1| flagellar basal-body rod protein FlgC [Thioalkalivibrio sp.
           HL-EbGR7]
          Length = 139

 Score = 51.0 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 7/44 (15%), Positives = 24/44 (54%)

Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +G++   N + + EM  MI  ++ + +   +++  ++ +L  ++
Sbjct: 92  QGYIFKPNVSVVEEMANMISASRSYQNNVEVMNTTKQLLLRTLQ 135



 Score = 37.2 bits (84), Expect = 2.1,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 30/81 (37%), Gaps = 6/81 (7%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNT----DTV--GFRTIKVKFSEVVGAIKNDIDQKI 56
            F++  +A  A   RL+ +A NM+N      T    +R     F+ V+ A         
Sbjct: 6  KIFDVSGSALSAQSVRLNAIASNMANAQVASQTPEGAYRAKHPVFASVLQAAGQSGSATP 65

Query: 57 SFVASGKEYLSKEVGSFISTG 77
            V +  E  ++ V  +    
Sbjct: 66 VRVVNVLESQAEPVAEYAPNH 86


>gi|77460471|ref|YP_349978.1| flagellar basal body rod protein FlgC [Pseudomonas fluorescens
           Pf0-1]
 gi|77384474|gb|ABA75987.1| putative flagellar basal-body rod protein [Pseudomonas fluorescens
           Pf0-1]
          Length = 147

 Score = 51.0 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 30/72 (41%), Gaps = 6/72 (8%)

Query: 168 GFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
           G V  +++  +   P  P  D        G++   N N + EM  MI  ++ F +   ++
Sbjct: 79  GVVEDQSNLEARYEPNHPAADAK------GYVYYPNVNVVEEMADMISASRSFQTNAEMM 132

Query: 228 DENEKSMLEAIR 239
           +  +  M + + 
Sbjct: 133 NTAKTMMQKVLT 144



 Score = 40.6 bits (93), Expect = 0.17,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 29/80 (36%), Gaps = 6/80 (7%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKISF 58
          FNI  +   A   RL+TVA N++N +TV       +R     F+ +    ++     +  
Sbjct: 7  FNIAGSGMSAQTTRLNTVASNIANAETVSSSIDQTYRARHPVFATMFQGGQSGGSNSLFQ 66

Query: 59 VASGKEYLSKEVGSFISTGT 78
                   + +G       
Sbjct: 67 NQDAAGQGVQVMGVVEDQSN 86


>gi|82702451|ref|YP_412017.1| flagellar basal-body rod protein FlgC [Nitrosospira multiformis
           ATCC 25196]
 gi|82410516|gb|ABB74625.1| flagellar basal-body rod protein FlgC [Nitrosospira multiformis
           ATCC 25196]
          Length = 139

 Score = 51.0 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 22/43 (51%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           GF+   N N + EM  MI  ++ + +   +++  +  +L+ + 
Sbjct: 94  GFVTMPNVNVVEEMVDMISASRSYQNNVDMMNTAKTLLLKTLT 136



 Score = 37.9 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 25/64 (39%), Gaps = 6/64 (9%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56
            F +  +A  A  QRL+ VA N++N D+        ++  +V F        N I    
Sbjct: 5  NIFTVAGSAMTAQNQRLNVVASNLANADSAASSNGQPYKAKQVVFMSTSPLGDNGISNGT 64

Query: 57 SFVA 60
            V 
Sbjct: 65 HGVR 68


>gi|88799018|ref|ZP_01114599.1| Flagellar basal body protein [Reinekea sp. MED297]
 gi|88778245|gb|EAR09439.1| Flagellar basal body protein [Reinekea sp. MED297]
          Length = 132

 Score = 51.0 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 35/88 (39%), Gaps = 1/88 (1%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
          + S  I   A L   +R S +A+N++N DT GF+   + F  ++               +
Sbjct: 7  ENSLGIHDNALLVRSERSSVLANNLANADTPGFKARDMDFKAILRGEVEKQQSLEMAETN 66

Query: 62 GKEYLSKEVGSFISTG-TELDFALEGDA 88
           +    ++   +       L  +++G+ 
Sbjct: 67 SRHIPGRQHEGWEKLYRHPLQPSIDGNT 94


>gi|86149025|ref|ZP_01067257.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni CF93-6]
 gi|88596860|ref|ZP_01100096.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni 84-25]
 gi|218562179|ref|YP_002343958.1| flagellar basal body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|85840383|gb|EAQ57640.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni CF93-6]
 gi|88190549|gb|EAQ94522.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni 84-25]
 gi|112359885|emb|CAL34673.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|315928561|gb|EFV07858.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni 305]
          Length = 164

 Score = 51.0 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 19/46 (41%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G++   N N + EM  +I  T+ + +  +     +     AI  + 
Sbjct: 118 GYVAYPNVNPVIEMADLIEATRAYQANVSAFTSAKTISQSAIDLLR 163



 Score = 43.3 bits (100), Expect = 0.031,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 18/39 (46%), Gaps = 6/39 (15%)

Query: 11 AQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43
             A   R++ ++ N++N +T     G  +R  +V F  
Sbjct: 13 GLSAQRFRMNVISSNIANANTTRTAEGGPYRRREVIFKA 51


>gi|91224193|ref|ZP_01259456.1| putative flagellar hook-associated protein [Vibrio alginolyticus
          12G01]
 gi|91191104|gb|EAS77370.1| putative flagellar hook-associated protein [Vibrio alginolyticus
          12G01]
          Length = 457

 Score = 51.0 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 27/88 (30%), Gaps = 1/88 (1%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
              NI L+   A    L   A N++N +TVG+   +   + V     N +      V  
Sbjct: 1  MNLVNIALSGLGANRVALDVTAQNVANVNTVGYSRQQALMASVDDGKANRLSP-GLGVEV 59

Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAW 89
                 +      T +    A     +
Sbjct: 60 TSIRRVTDQFLIKQTWSTNSMAAYASGY 87


>gi|16078682|ref|NP_389501.1| flagellar basal body rod protein FlgC [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221309494|ref|ZP_03591341.1| flagellar basal body rod protein FlgC [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221313819|ref|ZP_03595624.1| flagellar basal body rod protein FlgC [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221318743|ref|ZP_03600037.1| flagellar basal body rod protein FlgC [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221323014|ref|ZP_03604308.1| flagellar basal body rod protein FlgC [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|321315385|ref|YP_004207672.1| flagellar basal body rod protein FlgC [Bacillus subtilis BSn5]
 gi|120294|sp|P24501|FLGC_BACSU RecName: Full=Flagellar basal-body rod protein flgC
 gi|142916|gb|AAA22442.1| flgC [Bacillus subtilis]
 gi|2633991|emb|CAB13492.1| flagellar component of cell-proximal portion of basal-body rod
           [Bacillus subtilis subsp. subtilis str. 168]
 gi|320021659|gb|ADV96645.1| flagellar basal body rod protein FlgC [Bacillus subtilis BSn5]
          Length = 150

 Score = 51.0 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 42/108 (38%), Gaps = 3/108 (2%)

Query: 131 IQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS 190
             +P + ++ ++  KGE           G  +        +        N+   P +  +
Sbjct: 42  EWVPYRRKMVSLQSKGESFSSILNSQMSGSGNAGNGVKVSKITEDDSDFNLVYDPTDPDA 101

Query: 191 GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
                 G+++  N + + EM  ++  T+ + +  T ++  +  +++A+
Sbjct: 102 NAE---GYVQKPNVDPLKEMVDLVSSTRSYEANVTAMNATKGMLMKAL 146



 Score = 45.6 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 38/113 (33%), Gaps = 17/113 (15%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTV------G----FRTIKV-------KFSEVVG 46
           S N+  +A  A   R+  V+ N++N DT       G    +R   V        FS ++ 
Sbjct: 6   SLNVSASALTAQRVRMDVVSSNLANMDTTRAKQVNGEWVPYRRKMVSLQSKGESFSSILN 65

Query: 47  AIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
           +  +      + V   K        + +   T+ D   EG        P   +
Sbjct: 66  SQMSGSGNAGNGVKVSKITEDDSDFNLVYDPTDPDANAEGYVQKPNVDPLKEM 118


>gi|317014993|gb|ADU82429.1| flagellar basal body rod protein FlgC [Helicobacter pylori
           Gambia94/24]
          Length = 161

 Score = 51.0 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 19/44 (43%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            +G++   N N++ EM  ++  T+ + +        +     AI
Sbjct: 113 AQGYVAYPNVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAI 156



 Score = 39.5 bits (90), Expect = 0.48,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 6/49 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44
           +SF+I      A   R + ++ N++N +T     G  +R  +  F   
Sbjct: 3  LSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFRAF 51


>gi|269960122|ref|ZP_06174498.1| putative flagellar hook-associated protein 1 [Vibrio harveyi
          1DA3]
 gi|269835093|gb|EEZ89176.1| putative flagellar hook-associated protein 1 [Vibrio harveyi
          1DA3]
          Length = 457

 Score = 51.0 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 18/43 (41%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44
              NI L+   A    L   A N++N +T G+   +   + V
Sbjct: 1  MNLVNIALSGLNANRVALDVTAQNVANINTPGYSRQQALTASV 43


>gi|302382561|ref|YP_003818384.1| flagellar hook-associated protein FlgK [Brevundimonas
          subvibrioides ATCC 15264]
 gi|302193189|gb|ADL00761.1| flagellar hook-associated protein FlgK [Brevundimonas
          subvibrioides ATCC 15264]
          Length = 707

 Score = 51.0 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 23/51 (45%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
           +  NI  +   A +Q+L  V+DN+SN +T G+     + + +        
Sbjct: 4  NSILNIANSGLQAAQQQLRVVSDNVSNVNTPGYVRKIAEQTSLTTQGVGSG 54



 Score = 39.5 bits (90), Expect = 0.40,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 14/41 (34%), Gaps = 3/41 (7%)

Query: 201 DSN---ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            SN    N   E+  M    Q FN+   LI   +      +
Sbjct: 663 QSNYEGVNLDEELVLMTTYQQAFNASARLIQAAQDMYDTLL 703


>gi|238758112|ref|ZP_04619292.1| Flagellar basal-body rod protein flgC [Yersinia aldovae ATCC 35236]
 gi|238703650|gb|EEP96187.1| Flagellar basal-body rod protein flgC [Yersinia aldovae ATCC 35236]
          Length = 134

 Score = 51.0 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 20/43 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N +   EM   I  ++ + +   +++  +  ML+ + 
Sbjct: 89  GYVRMPNVDVTGEMINTISASRSYQANVEVLNTTKSLMLKTLT 131



 Score = 37.9 bits (86), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 23/58 (39%), Gaps = 6/58 (10%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSEVVGAIKNDID 53
             F+I  +A  A  QRL+  A NM+N     G     +R  +V F     A +    
Sbjct: 4  LNIFDIAGSALSAQSQRLNVSASNMANAESVTGPDGQPYRAKQVVFQVAAQAGQETGG 61


>gi|167034937|ref|YP_001670168.1| flagellar hook-associated protein FlgK [Pseudomonas putida GB-1]
 gi|166861425|gb|ABY99832.1| flagellar hook-associated protein FlgK [Pseudomonas putida GB-1]
          Length = 680

 Score = 51.0 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 21/39 (53%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39
          M +  +IGL+   A +  LS  ++N++N  T G+   + 
Sbjct: 1  MSSLISIGLSGLSASQAALSVTSNNIANAATSGYSRQQT 39


>gi|85712252|ref|ZP_01043303.1| Flagellar basal body rod protein [Idiomarina baltica OS145]
 gi|85693879|gb|EAQ31826.1| Flagellar basal body rod protein [Idiomarina baltica OS145]
          Length = 150

 Score = 51.0 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++  SN N+M EM  MI  ++ + +   + D  +      +R
Sbjct: 104 GYIYRSNVNTMEEMANMISASRSYQTNVQVADTAKTMTQRLLR 146



 Score = 37.5 bits (85), Expect = 1.6,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 23/54 (42%), Gaps = 6/54 (11%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKN 50
            FNI  +A  A   RL+T A N++N ++V       +R     F+  +     
Sbjct: 5  NIFNISGSAMSAQSVRLNTTASNLANANSVSSSIDETYRARSPIFAAALSDASG 58


>gi|311070047|ref|YP_003974970.1| flagellar hook-associated protein FlgK [Bacillus atrophaeus 1942]
 gi|310870564|gb|ADP34039.1| flagellar hook-associated protein FlgK [Bacillus atrophaeus 1942]
          Length = 507

 Score = 51.0 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 18/43 (41%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
            S  +   EM  MI     +N+   ++   ++ + + I  + +
Sbjct: 462 MSAVSLDEEMTNMIQFQHAYNAAARMVTLQDEMLDKVINGMGA 504



 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 18/40 (45%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
                 A  A +  LST A+N++N +T G+   +V    
Sbjct: 7  GLETARRALSAQQAALSTTANNVANANTDGYTRQRVSLEA 46


>gi|260779341|ref|ZP_05888233.1| flagellar hook-associated protein FlgK [Vibrio coralliilyticus
          ATCC BAA-450]
 gi|260605505|gb|EEX31800.1| flagellar hook-associated protein FlgK [Vibrio coralliilyticus
          ATCC BAA-450]
          Length = 457

 Score = 51.0 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 18/43 (41%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44
              NI L+   A    L   A N+SN +T G+   +   + V
Sbjct: 1  MNLVNIALSGLNANRVALDVTAQNVSNINTPGYSRQQALMASV 43


>gi|299534789|ref|ZP_07048119.1| flagellar basal body rod protein FlgC [Lysinibacillus fusiformis
           ZC1]
 gi|298729877|gb|EFI70422.1| flagellar basal body rod protein FlgC [Lysinibacillus fusiformis
           ZC1]
          Length = 153

 Score = 51.0 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 23/42 (54%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N + + EM  ++  T+ + +  T+ + N+  + +A+
Sbjct: 108 GYVNMPNVDPLKEMVDLMSATRSYEANITVFNANKSMLTKAL 149



 Score = 42.9 bits (99), Expect = 0.038,   Method: Composition-based stats.
 Identities = 9/29 (31%), Positives = 14/29 (48%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTV 32
            N   +A  A   R+  ++ NM+N DT 
Sbjct: 6  GMNTTASALTAQRLRMDVISSNMANMDTT 34


>gi|218135315|ref|ZP_03464119.1| hypothetical protein BACPEC_03220 [Bacteroides pectinophilus ATCC
          43243]
 gi|217990700|gb|EEC56711.1| hypothetical protein BACPEC_03220 [Bacteroides pectinophilus ATCC
          43243]
          Length = 606

 Score = 51.0 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 10/51 (19%), Positives = 20/51 (39%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
           T   +G +   + +  L+T A N++N +  G+   +V  S          
Sbjct: 5  MTGLYVGSSGLRSAQTALNTTAHNLANVNVKGYTRQQVALSSAEYFKIGQT 55



 Score = 41.8 bits (96), Expect = 0.084,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 19/40 (47%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
            +S  E+  MI   Q +N+ +  I+  ++ +   +  + S
Sbjct: 567 VSSEEELQNMIKYQQAYNAASRYINVIDQMLEHIVTRLGS 606


>gi|157363535|ref|YP_001470302.1| flagellar hook-associated protein FlgK [Thermotoga lettingae TMO]
 gi|157314139|gb|ABV33238.1| flagellar hook-associated protein FlgK [Thermotoga lettingae TMO]
          Length = 841

 Score = 51.0 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 15/39 (38%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            +   EM  MI     FN+   +I   ++ +   I  + 
Sbjct: 799 VSLDEEMTNMIQYQHAFNASARVITTIDEMIGRVIDKLG 837



 Score = 37.2 bits (84), Expect = 2.2,   Method: Composition-based stats.
 Identities = 6/22 (27%), Positives = 13/22 (59%)

Query: 19 LSTVADNMSNTDTVGFRTIKVK 40
          ++ VA N++N+ T G+   +  
Sbjct: 1  MNVVAHNIANSSTDGYSRQRPV 22


>gi|288958048|ref|YP_003448389.1| flagellar basal-body rod protein [Azospirillum sp. B510]
 gi|288910356|dbj|BAI71845.1| flagellar basal-body rod protein [Azospirillum sp. B510]
          Length = 136

 Score = 51.0 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 20/47 (42%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           G++   N NS+ E   M    + + +  + ID   + +   I  + +
Sbjct: 90  GYVLMPNVNSVVEAMDMREAQRSYEANLSAIDTARQMLTRTIDILRT 136



 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 16/109 (14%), Positives = 32/109 (29%), Gaps = 10/109 (9%)

Query: 1   MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFS-EVVGAIKN 50
           M    S  +  +   A   RL  +++N++N  T         +R   V F  E+  A+  
Sbjct: 1   MDLYKSMAVSASGMKAQGTRLKVISENLANASTTAETPGDLPYRRKTVVFKNELDRAMDV 60

Query: 51  DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
           D  +         ++  +   S  S   +    +               
Sbjct: 61  DKVRVAKVDVDKSDFQRRYDPSHPSADADGYVLMPNVNSVVEAMDMREA 109


>gi|241765797|ref|ZP_04763738.1| flagellar hook-associated protein FlgK [Acidovorax delafieldii
          2AN]
 gi|241364308|gb|EER59458.1| flagellar hook-associated protein FlgK [Acidovorax delafieldii
          2AN]
          Length = 664

 Score = 51.0 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 21/51 (41%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
           +  N+G  A LA +  L T   N++N +T G+    V    V G      
Sbjct: 1  MSLLNVGARALLANQVALQTAGHNIANVNTPGYSRQTVVLQTVQGQFTGGG 51



 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/150 (12%), Positives = 40/150 (26%), Gaps = 9/150 (6%)

Query: 98  IILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157
              T      +   G  ++  G     D  +V   +  +   +     G  S    +   
Sbjct: 518 QPYTPGAPISID--GWQITLQGTPKSGDTVNVGNALDPQYGDYYTRNAGNASALMGLRDV 575

Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLED-----SNANSMYEMGQ 212
               +  +S G+        +           +  T     LE      S  N   E  +
Sbjct: 576 KMFDNATLSDGYAGAIAQVGTRTQS--ASFAANLSTTIAANLERDRTAVSGVNLDEEAAK 633

Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           +I   Q + +   ++   +      I+ + 
Sbjct: 634 LIQFQQAYQASAKMLQIAQNIFDNLIQTVG 663


>gi|90411003|ref|ZP_01219017.1| flagellar basal body rod protein [Photobacterium profundum 3TCK]
 gi|90328216|gb|EAS44527.1| flagellar basal body rod protein [Photobacterium profundum 3TCK]
          Length = 138

 Score = 51.0 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 23/43 (53%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N M EM  MI  ++ + S   + D +++ ++  ++
Sbjct: 93  GYIYKPNVNVMEEMANMISASRSYQSNVQVADASKQMLMSTLQ 135



 Score = 35.6 bits (80), Expect = 6.1,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 39/111 (35%), Gaps = 10/111 (9%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVV----GAIKNDI 52
             FN+  +A  A   RL+T + N++N ++V       ++     F+  +          +
Sbjct: 5   NVFNVTGSAMSAESVRLNTTSSNLANANSVSSSAEETYKARHPIFAAALNSASYQRAESV 64

Query: 53  DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103
             ++  +   ++ L  E         +  +  + +     E    I  +R 
Sbjct: 65  PVQVKGIVESQKPLRAEYNPQHPLANDEGYIYKPNVNVMEEMANMISASRS 115


>gi|304316911|ref|YP_003852056.1| flagellar basal-body rod protein FlgB [Thermoanaerobacterium
          thermosaccharolyticum DSM 571]
 gi|302778413|gb|ADL68972.1| flagellar basal-body rod protein FlgB [Thermoanaerobacterium
          thermosaccharolyticum DSM 571]
          Length = 136

 Score = 51.0 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 21/41 (51%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51
          A  A E R   +++N++N DT GF+   V F  ++    N 
Sbjct: 15 ALDASELRDEVISNNIANVDTPGFKRSDVNFESILNDAINS 55


>gi|238924172|ref|YP_002937688.1| flagellar basal body rod protein [Eubacterium rectale ATCC 33656]
 gi|238875847|gb|ACR75554.1| flagellar basal body rod protein [Eubacterium rectale ATCC 33656]
 gi|291524901|emb|CBK90488.1| flagellar basal-body rod protein FlgC [Eubacterium rectale DSM
           17629]
          Length = 146

 Score = 51.0 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N++ EM  +I  T+ + +  T  + ++      ++
Sbjct: 101 GYVSYPNVNTVTEMTNLIDATRAYEANATAFEASKSMAQNGLQ 143



 Score = 48.3 bits (113), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 21/86 (24%), Positives = 31/86 (36%), Gaps = 6/86 (6%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56
           +FNI  +   A   R   +A N++N +T        +R   V FSE      + I    
Sbjct: 5  QAFNISASGMTAERFRTDIIAQNIANVNTTSTKEGTPYRRKIVTFSEKNVTPFSQIYSSS 64

Query: 57 SFVASGKEYLSKEVGSFISTGTELDF 82
             A G       V S  ST    ++
Sbjct: 65 KKAAVGNGVKVSSVTSDYSTDFIKEY 90


>gi|332284017|ref|YP_004415928.1| flagellar basal body rod protein FlgC [Pusillimonas sp. T7-7]
 gi|330427970|gb|AEC19304.1| flagellar basal body rod protein FlgC [Pusillimonas sp. T7-7]
          Length = 138

 Score = 51.0 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 20/43 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N + + E   MI  ++ + +   +I+  +  M+  + 
Sbjct: 93  GYVTMPNVDVVAETVNMISASRSYQANVEVINTAKSLMMRTLS 135



 Score = 37.5 bits (85), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 6/55 (10%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKND 51
          + F I  +A  A  QR++  A N++N D+V       +R  +V F     A ++ 
Sbjct: 5  SIFQIAGSALTAQSQRMNVTASNLANADSVAGPDGQPYRARQVVFQMAPVAGQSQ 59


>gi|330880524|gb|EGH14673.1| flagellar hook protein FlgE [Pseudomonas syringae pv. glycinea str.
           race 4]
          Length = 52

 Score = 51.0 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 17/48 (35%)

Query: 192 VTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             +    LE+SN +   E+  +I     + +    I      M   I+
Sbjct: 3   GYITGQALEESNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQTTIQ 50


>gi|315281334|ref|ZP_07869981.1| flagellar basal body rod protein FlgG [Listeria marthii FSL
          S4-120]
 gi|313615022|gb|EFR88519.1| flagellar basal body rod protein FlgG [Listeria marthii FSL
          S4-120]
          Length = 111

 Score = 51.0 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/97 (14%), Positives = 34/97 (35%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
               IG A  +   Q +   ++N++N  T GF+  ++    +     N  +  ++    
Sbjct: 1  MKGLYIGAAGMMNYMQHIQVHSNNVANAQTPGFKFDQLTSEVISRNKVNYQNGPVARQVG 60

Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98
            +Y  +   + I+      +    D  F ++     
Sbjct: 61 TIDYGVRPAATHINLTAGSSYITNRDRDFFMQDTNPT 97


>gi|291529042|emb|CBK94628.1| flagellar basal-body rod protein FlgC [Eubacterium rectale M104/1]
          Length = 146

 Score = 51.0 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N++ EM  +I  T+ + +  T  + ++      ++
Sbjct: 101 GYVSYPNVNTVTEMTNLIDATRAYEANATAFEASKSMAQNGLQ 143



 Score = 48.3 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/86 (24%), Positives = 31/86 (36%), Gaps = 6/86 (6%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56
           +FNI  +   A   R   +A N++N +T        +R   V FSE      + I    
Sbjct: 5  QAFNISASGMTAERFRTDIIAQNIANVNTTSTKGGTPYRRKIVTFSEKNVTPFSQIYSSS 64

Query: 57 SFVASGKEYLSKEVGSFISTGTELDF 82
             A G       V S  ST    ++
Sbjct: 65 KKAAVGNGVKVSSVTSDYSTDFIKEY 90


>gi|153831692|ref|ZP_01984359.1| flagellar hook-associated protein FlgK [Vibrio harveyi HY01]
 gi|148872202|gb|EDL71019.1| flagellar hook-associated protein FlgK [Vibrio harveyi HY01]
          Length = 457

 Score = 51.0 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 18/43 (41%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44
              NI L+   A    L   A N++N +T G+   +   + V
Sbjct: 1  MNLVNIALSGLNANRVALDVTAQNVANINTPGYSRQQALTASV 43


>gi|32490788|ref|NP_871042.1| hypothetical protein WGLp039 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|25165994|dbj|BAC24185.1| flgC [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 133

 Score = 51.0 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 22/43 (51%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G+++ SN N + EM   I  ++ + +   +I+     +L+ + 
Sbjct: 88  GYVKSSNVNMISEMINTISSSRSYQANVEVINTARSMILKTLT 130


>gi|315927025|gb|EFV06380.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp.
           jejuni DFVF1099]
          Length = 144

 Score = 51.0 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 19/46 (41%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G++   N N + EM  +I  T+ + +  +     +     AI  + 
Sbjct: 98  GYVAYPNVNPVIEMADLIEATRAYQANVSAFTSAKTISQSAIDLLR 143


>gi|169827118|ref|YP_001697276.1| flagellar basal body rod protein FlgC [Lysinibacillus sphaericus
           C3-41]
 gi|168991606|gb|ACA39146.1| Flagellar basal-body rod protein [Lysinibacillus sphaericus C3-41]
          Length = 153

 Score = 51.0 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 23/42 (54%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N + + EM  ++  T+ + +  T+ + N+  + +A+
Sbjct: 108 GYVNLPNVDPLKEMVDLMSATRSYEANVTVFNANKSMLTKAL 149



 Score = 43.7 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 9/29 (31%), Positives = 14/29 (48%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTV 32
            N   +A  A   R+  ++ NM+N DT 
Sbjct: 6  GMNTTASALTAQRLRMDVISSNMANMDTT 34


>gi|126653751|ref|ZP_01725669.1| flagellar basal-body rod protein C [Bacillus sp. B14905]
 gi|126589715|gb|EAZ83851.1| flagellar basal-body rod protein C [Bacillus sp. B14905]
          Length = 153

 Score = 51.0 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 23/42 (54%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N + + EM  ++  T+ + +  T+ + N+  + +A+
Sbjct: 108 GYVNLPNVDPLKEMVDLMSATRSYEANVTVFNANKSMLTKAL 149



 Score = 43.7 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 9/29 (31%), Positives = 14/29 (48%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTV 32
            N   +A  A   R+  ++ NM+N DT 
Sbjct: 6  GMNTTASALTAQRLRMDVISSNMANMDTT 34


>gi|94312666|ref|YP_585875.1| flagellar basal body rod protein FlgB [Cupriavidus metallidurans
          CH34]
 gi|93356518|gb|ABF10606.1| flagellar basal body rod protein FlgB [Cupriavidus metallidurans
          CH34]
 gi|222834412|gb|EEE72889.1| predicted protein [Populus trichocarpa]
          Length = 134

 Score = 51.0 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 29/75 (38%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR S +A N+++ DT G++     F+  +        +      S         
Sbjct: 14 ALSLRTQRQSVIASNIAHADTPGYKARDFDFASTLAQSVERGQRSEGTSLSTTSVRHLPG 73

Query: 71 GSFISTGTELDFALE 85
           +  STG ELD+ + 
Sbjct: 74 QAPTSTGHELDYRIP 88


>gi|319787115|ref|YP_004146590.1| flagellar hook-associated protein FlgK [Pseudoxanthomonas
          suwonensis 11-1]
 gi|317465627|gb|ADV27359.1| flagellar hook-associated protein FlgK [Pseudoxanthomonas
          suwonensis 11-1]
          Length = 625

 Score = 51.0 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 25/42 (59%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
           +  + G  A LA ++ LSTV+ N++N +T G+   +V F+ 
Sbjct: 1  MSVLSTGTGALLAFQRALSTVSHNVANVNTEGYTRQRVDFAA 42


>gi|260428875|ref|ZP_05782852.1| flagellar basal-body rod protein FlgC [Citreicella sp. SE45]
 gi|260419498|gb|EEX12751.1| flagellar basal-body rod protein FlgC [Citreicella sp. SE45]
          Length = 130

 Score = 51.0 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 20/41 (48%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
           + ++  +   A   RL  V++N++N DT G+    + F  
Sbjct: 6  NALSVSSSGLRAQASRLRIVSENIANVDTPGYHRKTIPFET 46



 Score = 39.5 bits (90), Expect = 0.43,   Method: Composition-based stats.
 Identities = 4/46 (8%), Positives = 18/46 (39%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           GF + +N + + E+       + + +   + ++  +     +  + 
Sbjct: 84  GFYDGTNVDLIVELADAREAQRSYEANLKMFEQTRQMSSNLLDLLR 129


>gi|313903612|ref|ZP_07837002.1| flagellar hook-associated protein FlgK [Thermaerobacter
          subterraneus DSM 13965]
 gi|313466165|gb|EFR61689.1| flagellar hook-associated protein FlgK [Thermaerobacter
          subterraneus DSM 13965]
          Length = 533

 Score = 51.0 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 6/29 (20%), Positives = 12/29 (41%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKV 39
             A ++ L     N++N +T G+     
Sbjct: 14 GLWAQQRALDVTGHNIANANTPGYSRQVA 42



 Score = 37.9 bits (86), Expect = 1.2,   Method: Composition-based stats.
 Identities = 5/39 (12%), Positives = 13/39 (33%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            +   EM Q++     + +   L+   +  +   I    
Sbjct: 491 VSLDEEMTQLVRYQHAYAAAARLVTAVDSMLAVLIERTG 529


>gi|229541552|ref|ZP_04430612.1| flagellar hook-associated protein FlgK [Bacillus coagulans 36D1]
 gi|229325972|gb|EEN91647.1| flagellar hook-associated protein FlgK [Bacillus coagulans 36D1]
          Length = 538

 Score = 51.0 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 19/41 (46%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S+ +   E+  MI   Q +N+   +I   ++ + + I  + 
Sbjct: 494 SSVSVDEELTNMIKYQQAYNAAARMITMTDEMLDKIINGMG 534



 Score = 41.8 bits (96), Expect = 0.081,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 16/40 (40%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
                 A  A +  L TV  N++N +T G+   +V    
Sbjct: 6  GLETAKRALTAQQNALYTVGQNVANANTDGYTRQRVNLQA 45


>gi|269965650|ref|ZP_06179763.1| putative flagellar hook-associated protein [Vibrio alginolyticus
          40B]
 gi|269829718|gb|EEZ83954.1| putative flagellar hook-associated protein [Vibrio alginolyticus
          40B]
          Length = 107

 Score = 51.0 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 27/88 (30%), Gaps = 1/88 (1%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
              NI L+   A    L   A N++N +TVG+   +   + V     N +      V  
Sbjct: 1  MNLVNIALSGLGANRVALDVTAQNVANVNTVGYSRQQALMASVDDGKANRLSP-GLGVEV 59

Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAW 89
                 +      T +    A     +
Sbjct: 60 TSIRRVTDQFLIKQTWSTNSMAAYASGY 87


>gi|257095361|ref|YP_003169002.1| flagellar basal-body rod protein FlgC [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257047885|gb|ACV37073.1| flagellar basal-body rod protein FlgC [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 134

 Score = 51.0 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 7/34 (20%), Positives = 17/34 (50%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
           G++   N N + EM  MI  ++ + +   +++  
Sbjct: 89  GYVTMPNVNVVDEMTNMISASRSYQTNVEVMNTA 122



 Score = 37.9 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 18/108 (16%), Positives = 33/108 (30%), Gaps = 6/108 (5%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSEVVGAIKNDIDQK 55
             +F +  +A  A   RL+ VA N++N    VG     +R  +V F             +
Sbjct: 4   LNAFQVAGSALTAQSLRLNAVASNLANADSVVGSDGKPYRAKQVVFVATPMGSPAAEGVR 63

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103
           +  V        +          +  +    +     E    I  +R 
Sbjct: 64  VKQVVEDSSPGRRVYDPRNPAADDRGYVTMPNVNVVDEMTNMISASRS 111


>gi|227820856|ref|YP_002824826.1| flagellar basal body rod protein FlgC [Sinorhizobium fredii NGR234]
 gi|227339855|gb|ACP24073.1| flagellar basal-body rod protein FlgC [Sinorhizobium fredii NGR234]
          Length = 139

 Score = 51.0 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/99 (12%), Positives = 33/99 (33%)

Query: 145 KGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNA 204
            G    + K I+             V  +  G   +      +  +    ++G ++  N 
Sbjct: 39  PGADPYRRKTISFAAEVDRASGASLVEVQRLGTDDSDFSIEFDPGNPAADEKGMVKMPNV 98

Query: 205 NSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           N + EM  M    + + +    + ++   + + I  + +
Sbjct: 99  NVLIEMADMREANRAYEANLQTVKQSRDLISQTIDLLRA 137



 Score = 42.5 bits (98), Expect = 0.045,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 23/60 (38%), Gaps = 10/60 (16%)

Query: 1  MQ---TSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKN 50
          M    ++  +  +   A   RL  V++N++N  + G       +R   + F+  V     
Sbjct: 1  MDPLTSALKVSASGLQAESTRLRIVSENIANARSTGDVPGADPYRRKTISFAAEVDRASG 60


>gi|156973584|ref|YP_001444491.1| flagellar basal body rod protein FlgC [Vibrio harveyi ATCC
           BAA-1116]
 gi|156525178|gb|ABU70264.1| hypothetical protein VIBHAR_01287 [Vibrio harveyi ATCC BAA-1116]
          Length = 137

 Score = 51.0 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 23/43 (53%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N M EM  MI  ++ + +   + D +++ +L  ++
Sbjct: 92  GYIYKPNVNVMEEMANMISASRAYQTNLQVADSSKQMLLRTLQ 134



 Score = 38.3 bits (87), Expect = 1.0,   Method: Composition-based stats.
 Identities = 15/81 (18%), Positives = 26/81 (32%), Gaps = 6/81 (7%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56
            FN+  +A  A   RL+T + N++N D+V       ++     F   +       D   
Sbjct: 5  NVFNVTGSAMSAESVRLNTTSSNLANADSVSSSAKDTYKARHAVFGAELSNAMRGGDTVP 64

Query: 57 SFVASGKEYLSKEVGSFISTG 77
            V    E        +    
Sbjct: 65 VKVMGIVESDKPLNAEYNPDH 85


>gi|291484170|dbj|BAI85245.1| flagellar basal body rod protein FlgC [Bacillus subtilis subsp.
           natto BEST195]
          Length = 150

 Score = 51.0 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 42/108 (38%), Gaps = 3/108 (2%)

Query: 131 IQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS 190
             +P + ++ ++  KGE           G  +        +        N+   P +  +
Sbjct: 42  EWVPYRRKMVSLQSKGESFSSILNSQMSGSGNAGNGVKVSKITEDDSDFNLVYDPTDPDA 101

Query: 191 GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
                 G+++  N + + EM  ++  T+ + +  T ++  +  +++A+
Sbjct: 102 NAD---GYVQKPNVDPLKEMVDLVSSTRSYEANVTAMNATKGMLMKAL 146



 Score = 45.6 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 38/113 (33%), Gaps = 17/113 (15%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTV------G----FRTIKV-------KFSEVVG 46
           S N+  +A  A   R+  V+ N++N DT       G    +R   V        FS ++ 
Sbjct: 6   SLNVSASALTAQRVRMDVVSSNLANMDTTRAKQVNGEWVPYRRKMVSLQSKGESFSSILN 65

Query: 47  AIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
           +  +      + V   K        + +   T+ D   +G        P   +
Sbjct: 66  SQMSGSGNAGNGVKVSKITEDDSDFNLVYDPTDPDANADGYVQKPNVDPLKEM 118


>gi|255521621|ref|ZP_05388858.1| flagellar basal body rod protein FlgG [Listeria monocytogenes FSL
          J1-175]
          Length = 106

 Score = 51.0 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/98 (13%), Positives = 28/98 (28%), Gaps = 1/98 (1%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN-DIDQKISFVA 60
               IG A  +   Q +   ++N++N  T GF+  ++    +     N         V 
Sbjct: 1  MKGLYIGAAGMMNYMQHIQVHSNNVANAQTPGFKFDQLTSEVISRNKVNYQNGPVARQVG 60

Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98
          +    +         T            +F  ++    
Sbjct: 61 TIDYGVRPAATHINLTAGSSYITNRDRDFFMQDTDPTQ 98


>gi|183222558|ref|YP_001840554.1| flagellar hook-associated protein FlgK [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
 gi|189912593|ref|YP_001964148.1| flagellar hook-associated protein FlgK [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Ames)']
 gi|167777269|gb|ABZ95570.1| Endoflagellar hook junction protein [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Ames)']
 gi|167780980|gb|ABZ99278.1| Flagellar hook-associated protein 1 (HAP1) [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Paris)']
          Length = 637

 Score = 51.0 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 15/39 (38%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            N   EM  M+   Q +N+   +I    + +   I  + 
Sbjct: 598 VNLDEEMANMVQFQQSYNASARMISTLNEMLDTIINRLG 636


>gi|54308095|ref|YP_129115.1| flagellar basal body rod protein FlgC [Photobacterium profundum
           SS9]
 gi|46912521|emb|CAG19313.1| Putative flagellar basal body rod protein FlgC [Photobacterium
           profundum SS9]
          Length = 138

 Score = 51.0 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 23/43 (53%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N M EM  MI  ++ + S   + D +++ ++  ++
Sbjct: 93  GYIYKPNVNVMEEMANMISASRSYQSNVQVADASKQMLMSTLQ 135


>gi|251797448|ref|YP_003012179.1| flagellar basal-body rod protein FlgB [Paenibacillus sp. JDR-2]
 gi|247545074|gb|ACT02093.1| flagellar basal-body rod protein FlgB [Paenibacillus sp. JDR-2]
          Length = 132

 Score = 51.0 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 21/44 (47%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54
          A  A E R   VA+N++N DT  F+  +V F E++         
Sbjct: 12 ALKASELRQGVVANNIANVDTPNFKRSEVLFEELLSQEMGGQTA 55


>gi|46581297|ref|YP_012105.1| flagellar basal-body rod protein [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46450718|gb|AAS97365.1| flagellar basal-body rod protein, putative [Desulfovibrio vulgaris
           str. Hildenborough]
 gi|311234961|gb|ADP87815.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           vulgaris RCH1]
          Length = 125

 Score = 51.0 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 7/35 (20%), Positives = 15/35 (42%)

Query: 199 LEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           +E SN ++  EM  M+   +   +    I  ++  
Sbjct: 82  VEGSNTDTAREMVSMMETQRAHEANVASIRAHDDM 116



 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 30/84 (35%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
           + G AA  A    L   A+N++N +T GFR  + ++    G     + +       G  
Sbjct: 3  IDTGWAALDAFGIGLGVTANNIANVNTDGFRASQTRYETGPGGEGVRLGEIRESTTPGPL 62

Query: 65 YLSKEVGSFISTGTELDFALEGDA 88
          +    +        +    +EG  
Sbjct: 63 HEGMGIVEREGRMEQQRVLVEGSN 86


>gi|192362305|ref|YP_001982402.1| flagellar basal body rod protein FlgC [Cellvibrio japonicus
           Ueda107]
 gi|190688470|gb|ACE86148.1| flagellar basal-body rod protein FlgC [Cellvibrio japonicus
           Ueda107]
          Length = 148

 Score = 51.0 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/106 (14%), Positives = 32/106 (30%), Gaps = 6/106 (5%)

Query: 134 PQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT 193
                       G ++  G     +   +     G V  +        P  P  D     
Sbjct: 46  QPVFAAIAQQAMGNLNGAGYSQNELDANAGVQVLGIVESDAPLQRRYEPGHPKADAD--- 102

Query: 194 VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              G++   N N + EM  MI  ++ F     +++  ++ +   + 
Sbjct: 103 ---GYVFYPNVNPVEEMANMISASRSFQMNVEVMNSAKQMVQRVLT 145



 Score = 37.2 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 24/59 (40%), Gaps = 6/59 (10%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKIS 57
          F+I      A   RL+T A N++N  +        +R+ +  F+ +      +++    
Sbjct: 7  FDIAGTGMNAQSLRLNTTASNLANAQSASSSVDEVYRSRQPVFAAIAQQAMGNLNGAGY 65


>gi|323165582|gb|EFZ51369.1| flagellar basal-body rod protein FlgC [Shigella sonnei 53G]
          Length = 134

 Score = 51.0 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 6/43 (13%), Positives = 22/43 (51%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G+++  N + + EM   +  ++ + +   +++  +  ML+ + 
Sbjct: 89  GYVKMPNVDVVGEMVNTMSASRSYQANVEVLNMVKSMMLKTLT 131



 Score = 38.7 bits (88), Expect = 0.74,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 6/47 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42
             F+I  +A  A  QRL+  A N++N     G     +R  +V F 
Sbjct: 4  LNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRAKQVVFQ 50


>gi|283850813|ref|ZP_06368099.1| flagellar hook-associated protein FlgK [Desulfovibrio sp. FW1012B]
 gi|283573736|gb|EFC21710.1| flagellar hook-associated protein FlgK [Desulfovibrio sp. FW1012B]
          Length = 709

 Score = 51.0 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 22/72 (30%)

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
            G V +  S  +        +      +    L  S  N   E+  MI     + +   L
Sbjct: 634 SGLVGKIGSDTANASYQASYQSTLAAQLDAAQLSASGVNLDEELTNMIKFQHSYQAAAKL 693

Query: 227 IDENEKSMLEAI 238
           I   ++ M   +
Sbjct: 694 ISTADQLMETVL 705



 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 27/77 (35%), Gaps = 2/77 (2%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE--VVGAIKNDIDQKISFVASGKE 64
          IG +A    +  L    +N++N DT G+    +   +   V      +   +      + 
Sbjct: 10 IGRSALSTSQAALQVTGNNIANVDTEGYSKQTLITKDGSYVSGSAGQLGSGVVAQEVVRS 69

Query: 65 YLSKEVGSFISTGTELD 81
          +       ++  GT  D
Sbjct: 70 HDQFIEAQYLQRGTARD 86


>gi|150395483|ref|YP_001325950.1| flagellar basal body rod protein FlgC [Sinorhizobium medicae
           WSM419]
 gi|150026998|gb|ABR59115.1| flagellar basal-body rod protein FlgC [Sinorhizobium medicae
           WSM419]
          Length = 139

 Score = 51.0 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/99 (14%), Positives = 32/99 (32%)

Query: 145 KGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNA 204
            G    + K I+             V  E  G   +      +  +    ++G ++  N 
Sbjct: 39  PGTDPYRRKTISFAAEVDRASGASLVEVERLGTDDSDFNVEFDPGNPAADEKGMVKLPNV 98

Query: 205 NSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           N + EM  M    + + +    I +    + + I  + +
Sbjct: 99  NILIEMADMREANRAYEANLQTIKQARDLISQTIDLLRA 137



 Score = 42.9 bits (99), Expect = 0.033,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 23/60 (38%), Gaps = 10/60 (16%)

Query: 1  MQ---TSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKN 50
          M    ++  +  +   A   RL  V++N++N  + G       +R   + F+  V     
Sbjct: 1  MDPLTSALKVSASGLQAESTRLRIVSENIANARSTGDAPGTDPYRRKTISFAAEVDRASG 60


>gi|28275264|ref|NP_783519.1| flagellar hook-associated protein [Shewanella oneidensis MR-1]
          Length = 386

 Score = 51.0 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 30/80 (37%), Gaps = 1/80 (1%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA-IKNDIDQKISFVA 60
              NI     LA + +L   ++N++N +TVG+       + +    + +      ++V+
Sbjct: 3  IDLLNIARTGVLASQSQLGVTSNNIANANTVGYHRQVATQTTLDSQRLGSSFYGTGTYVS 62

Query: 61 SGKEYLSKEVGSFISTGTEL 80
            K   +      +  G   
Sbjct: 63 DVKRIYNDYAARELRIGQTT 82


>gi|329849687|ref|ZP_08264533.1| flagellar basal-body rod protein FlgC [Asticcacaulis biprosthecum
           C19]
 gi|328841598|gb|EGF91168.1| flagellar basal-body rod protein FlgC [Asticcacaulis biprosthecum
           C19]
          Length = 138

 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 5/47 (10%), Positives = 20/47 (42%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
            +G+++  N +++ E   M    + + +   +I+       + +  +
Sbjct: 90  AQGYVKRPNVDTLTESMDMREAQRAYEANLNVIETARDMNQKILNIL 136


>gi|302874587|ref|YP_003843220.1| flagellar basal-body rod protein FlgC [Clostridium cellulovorans
           743B]
 gi|307690802|ref|ZP_07633248.1| flagellar basal body rod protein FlgC [Clostridium cellulovorans
           743B]
 gi|302577444|gb|ADL51456.1| flagellar basal-body rod protein FlgC [Clostridium cellulovorans
           743B]
          Length = 143

 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 22/47 (46%), Gaps = 1/47 (2%)

Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           +G++   N N + EM  +I  ++ + +  T I   +    +A+  I 
Sbjct: 97  QGYVTMPNINILNEMADLIASSRAYEANVTAITAQKGIFTKAL-EIG 142



 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 19/46 (41%), Gaps = 6/46 (13%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43
          S  I  +   A   R+  V+ N++N +T     G  ++     F E
Sbjct: 6  SMRISSSGLSAERLRMDIVSSNIANVNTTRTEDGGPYKRKIGMFQE 51


>gi|254437430|ref|ZP_05050924.1| conserved domain protein [Octadecabacter antarcticus 307]
 gi|198252876|gb|EDY77190.1| conserved domain protein [Octadecabacter antarcticus 307]
          Length = 1436

 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 23/50 (46%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50
          M + F IG +A  A  Q L+    N+ N +T G+R      +EV G    
Sbjct: 1  MASLFEIGRSAINAQRQALNVTGQNIVNANTEGYRRRDANLTEVFGVQSE 50


>gi|195952550|ref|YP_002120840.1| flagellar basal-body rod protein FlgC [Hydrogenobaculum sp.
           Y04AAS1]
 gi|195932162|gb|ACG56862.1| flagellar basal-body rod protein FlgC [Hydrogenobaculum sp.
           Y04AAS1]
          Length = 136

 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 20/44 (45%)

Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +G++E+ N N   EM  MI  TQ + +  +  +  +      I 
Sbjct: 90  QGYVEEPNINVTTEMVDMITATQSYQANLSAFNMTKNIAQFTIN 133



 Score = 37.9 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/119 (11%), Positives = 42/119 (35%), Gaps = 5/119 (4%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTD---TVG--FRTIKVKFSEVVGAIKNDIDQKIS 57
            +F++  +   A   R++T+A N++N +   T G  ++ ++  F  V             
Sbjct: 6   NAFDVSASGMYAERIRMNTIASNLANYESYKTDGTPYQKLEPVFQAVYDRNMLSDGLVPV 65

Query: 58  FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVS 116
            V+  ++    ++    S           +    + +    ++T    ++       ++
Sbjct: 66  NVSEIRQSNGFKLIYDPSNPHANTQGYVEEPNINVTTEMVDMITATQSYQANLSAFNMT 124


>gi|27381986|ref|NP_773515.1| flagellar basal body rod protein FlgC [Bradyrhizobium japonicum
           USDA 110]
 gi|27355156|dbj|BAC52140.1| flagellar basal-body rod protein [Bradyrhizobium japonicum USDA
           110]
          Length = 138

 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 31/98 (31%)

Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNAN 205
           G    + K I               + +  G+         +       K G+++  N N
Sbjct: 41  GADPYQRKTITFDAAMDRASGAQLAKVKEVGVDTTPYRVEYDPGHPAADKSGYVKLPNVN 100

Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
            M EM  M  + + + +   ++ +    +   I  + S
Sbjct: 101 MMIEMADMREVNRSYEANLQVVKQVRSMLGMTIDLLRS 138



 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 10/104 (9%), Positives = 28/104 (26%), Gaps = 8/104 (7%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKN-DIDQK 55
           S  +  +   A   R+  V++N++N  + G       ++   + F   +       + + 
Sbjct: 8   SLTVASSGLEAQSTRMRIVSENLANATSTGRTAGADPYQRKTITFDAAMDRASGAQLAKV 67

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
                    Y  +      +        L         +    +
Sbjct: 68  KEVGVDTTPYRVEYDPGHPAADKSGYVKLPNVNMMIEMADMREV 111


>gi|160878463|ref|YP_001557431.1| flagellar hook-associated protein FlgK [Clostridium
          phytofermentans ISDg]
 gi|160427129|gb|ABX40692.1| flagellar hook-associated protein FlgK [Clostridium
          phytofermentans ISDg]
          Length = 620

 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 8/51 (15%), Positives = 19/51 (37%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
           +S  +G++     +  L+T   N++N +T G+   +              
Sbjct: 4  MSSLYVGVSGLQVSQNGLNTTGHNLANVETEGYVRQQTVLQTSQYRTIGQS 54


>gi|120601522|ref|YP_965922.1| hypothetical protein Dvul_0472 [Desulfovibrio vulgaris DP4]
 gi|120561751|gb|ABM27495.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           vulgaris DP4]
          Length = 125

 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 7/35 (20%), Positives = 15/35 (42%)

Query: 199 LEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           +E SN ++  EM  M+   +   +    I  ++  
Sbjct: 82  VEGSNTDTAREMVSMMETQRAHEANVASIRAHDDM 116



 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 30/84 (35%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
           + G AA  A    L   A+N++N +T GFR  + ++    G     + +       G  
Sbjct: 3  IDTGWAALDAFGIGLGVTANNIANVNTDGFRASQTRYETGPGGEGVRVGEIRESTTPGPL 62

Query: 65 YLSKEVGSFISTGTELDFALEGDA 88
          +    +        +    +EG  
Sbjct: 63 HEGMGIVEREGRMEQQRVLVEGSN 86


>gi|94500248|ref|ZP_01306781.1| Flagellar hook-associated protein [Oceanobacter sp. RED65]
 gi|94427547|gb|EAT12524.1| Flagellar hook-associated protein [Oceanobacter sp. RED65]
          Length = 991

 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 9/52 (17%), Positives = 19/52 (36%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M     IG++     +  L+   +N++N DT G+              +  +
Sbjct: 1  MAGILEIGISGLRVHQTALTVTGNNIANVDTEGYSRQDASIVSQNPQFQGGV 52


>gi|288554150|ref|YP_003426085.1| flagellar hook-associated protein FlgK [Bacillus pseudofirmus
          OF4]
 gi|288545310|gb|ADC49193.1| flagellar hook-associated protein FlgK [Bacillus pseudofirmus
          OF4]
          Length = 523

 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 18/40 (45%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
                 A +  +  L T   N++N +T G+   +V F++
Sbjct: 7  GLETARRAMMTQQYALHTTGHNIANANTPGYSRQRVNFTQ 46



 Score = 48.3 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 16/41 (39%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S+ +   EM  MI     +N+    I   ++ +   I  + 
Sbjct: 479 SSVSLDEEMTDMIKFQHAYNAAARNITMVDEMLDRIINGLG 519


>gi|152965588|ref|YP_001361372.1| flagellar hook-associated protein FlgK [Kineococcus radiotolerans
          SRS30216]
 gi|151360105|gb|ABS03108.1| flagellar hook-associated protein FlgK [Kineococcus radiotolerans
          SRS30216]
          Length = 482

 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 23/53 (43%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK 55
          +  N    A  A ++ + T   N++N +T G+   +V+ S  V        QK
Sbjct: 5  SGINTASRALGAAQRGMETTGQNIANVNTPGYSRQRVEQSSSVLNQTGQFTQK 57



 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 4/41 (9%), Positives = 17/41 (41%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   EM  ++     +++   ++   ++++   +  + 
Sbjct: 442 SGVNLDEEMTNLVAYQHAYSAAAKVLTTMDEALQSLLNMVR 482


>gi|149375037|ref|ZP_01892810.1| Flagellar basal body protein [Marinobacter algicola DG893]
 gi|149360926|gb|EDM49377.1| Flagellar basal body protein [Marinobacter algicola DG893]
          Length = 132

 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 32/103 (31%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
             +  I   A     +R   +A+N++N DT G++   V F  ++   ++ +         
Sbjct: 6   DKALGIHQHALEGRIKRAEVLANNLANADTPGYKARDVDFQAMMQKAQDSMSGFGMTRTH 65

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDG 104
                +  +G+       +      D              R+ 
Sbjct: 66  ESHMDTSSMGADSELLYRVPHQPSVDGNTVDAQQEQTRFMRNA 108


>gi|77464908|ref|YP_354412.1| flagellar basal body rod protein FlgC [Rhodobacter sphaeroides
          2.4.1]
 gi|221640829|ref|YP_002527091.1| flagellar basal body rod protein FlgC [Rhodobacter sphaeroides
          KD131]
 gi|77389326|gb|ABA80511.1| putative flagellar basal-body rod protein FlgC [Rhodobacter
          sphaeroides 2.4.1]
 gi|221161610|gb|ACM02590.1| flagellar basal-body rod protein FlgC [Rhodobacter sphaeroides
          KD131]
          Length = 128

 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 20/42 (47%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
            S  +  +   +   RL  V++N++N DT G+    V F E
Sbjct: 7  LQSLGLSASGMRSQALRLRHVSENIANADTPGYHRKTVSFQE 48



 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 8/79 (10%), Positives = 25/79 (31%)

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223
           D   G V      +  +           +  + G+ + SN + + E+       + + + 
Sbjct: 49  DPDSGLVSTGPVRLDRSELQKIYAPGHPLAGEDGYYDGSNVDLVVEIADAREAQRSYEAN 108

Query: 224 TTLIDENEKSMLEAIRNIA 242
             + D+  +     +  + 
Sbjct: 109 LRMFDQARQMTQSLLDLLR 127


>gi|225181620|ref|ZP_03735061.1| flagellar hook-associated protein FlgK [Dethiobacter alkaliphilus
          AHT 1]
 gi|225167728|gb|EEG76538.1| flagellar hook-associated protein FlgK [Dethiobacter alkaliphilus
          AHT 1]
          Length = 494

 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 20/61 (32%), Gaps = 1/61 (1%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS-EVVGAIKNDIDQKISFVASG 62
            NI      A ++ L   A N++N +T G+       S        N      S V   
Sbjct: 6  GLNISRLGMQAQQKALEVTAHNVANANTPGYSRQVAGMSTTTPLPYPNGQGMLGSGVKVS 65

Query: 63 K 63
          +
Sbjct: 66 Q 66



 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 6/40 (15%), Positives = 14/40 (35%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           S  +   EM  M+     + +   +I   ++     I  +
Sbjct: 453 SGVSIDEEMANMVQFQLSYQASARVITTLDEIYDTLINRM 492


>gi|154250318|ref|YP_001411143.1| flagellar hook-associated protein FlgK [Fervidobacterium nodosum
          Rt17-B1]
 gi|154154254|gb|ABS61486.1| flagellar hook-associated protein FlgK [Fervidobacterium nodosum
          Rt17-B1]
          Length = 847

 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 32/85 (37%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
           N GL    A +  ++ VA N++N +T GF   + +   +       + Q    +  G  
Sbjct: 10 LNTGLLGVYASKLAMNVVAHNIANANTPGFSRQRPELLTMPPIPITSLTQPAVPLQIGTG 69

Query: 65 YLSKEVGSFISTGTELDFALEGDAW 89
             +++        ++ +    + +
Sbjct: 70 VYVRDIKRVRDAFLDIQYRQTNNKY 94



 Score = 48.7 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 15/39 (38%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            +   EM  MI   Q FN+   ++   +  +   I  + 
Sbjct: 805 VSLDEEMANMIKYQQAFNAAARVMTAVDDMISRVIDKLG 843


>gi|296330833|ref|ZP_06873308.1| flagellar basal body rod protein FlgC [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305674351|ref|YP_003866023.1| flagellar component of cell-proximal portion of basal-body rod
           [Bacillus subtilis subsp. spizizenii str. W23]
 gi|296151838|gb|EFG92712.1| flagellar basal body rod protein FlgC [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305412595|gb|ADM37714.1| flagellar component of cell-proximal portion of basal-body rod
           [Bacillus subtilis subsp. spizizenii str. W23]
          Length = 150

 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 42/108 (38%), Gaps = 3/108 (2%)

Query: 131 IQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS 190
             +P + ++ ++  KGE           G  +        +        N+   P +  +
Sbjct: 42  EWMPYRRKMVSLQSKGESFSSILNSQMSGSGNAGNGVKVSKITEDDSEFNLVYDPTDPDA 101

Query: 191 GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
                 G+++  N + + EM  ++  T+ + +  T ++  +  +++A+
Sbjct: 102 NAE---GYVQKPNVDPLKEMVDLVSSTRSYEANVTAMNATKGMLMKAL 146



 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 38/113 (33%), Gaps = 17/113 (15%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTV------G----FRTIKV-------KFSEVVG 46
           S N+  +A  A   R+  V+ N++N DT       G    +R   V        FS ++ 
Sbjct: 6   SLNVSASALTAQRVRMDVVSSNLANMDTTRAKQVNGEWMPYRRKMVSLQSKGESFSSILN 65

Query: 47  AIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
           +  +      + V   K        + +   T+ D   EG        P   +
Sbjct: 66  SQMSGSGNAGNGVKVSKITEDDSEFNLVYDPTDPDANAEGYVQKPNVDPLKEM 118


>gi|285018203|ref|YP_003375914.1| flagellar hook-associated protein 1 (hap1) [Xanthomonas
          albilineans GPE PC73]
 gi|283473421|emb|CBA15926.1| probable flagellar hook-associated protein 1 (hap1) [Xanthomonas
          albilineans]
          Length = 624

 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 25/50 (50%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51
           +  + G  A LA ++ L TV+ N++N +T G+   +  F+  V     +
Sbjct: 1  MSVMSTGTGALLAFQRALQTVSHNVANANTNGYSRQRASFATNVPNQFGN 50



 Score = 41.8 bits (96), Expect = 0.074,   Method: Composition-based stats.
 Identities = 20/164 (12%), Positives = 46/164 (28%), Gaps = 3/164 (1%)

Query: 79  ELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDE 138
             + A      + ++       T      ++ +G  ++  GK    D  +V    P   +
Sbjct: 464 PSNIAFVDATHYTIDGTGPFAYT--AGQTISANGWSLTLDGKPSSGDSFAVSPTGPGSSD 521

Query: 139 IFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGF 198
             N      +    K +    +       G      S        +  +++     +   
Sbjct: 522 NGNAQLLSHL-DDAKALNGGTITLNGAVSGLSTTIGSAARQAQYSSDAQNVIQSNAQDAR 580

Query: 199 LEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
              S  N   E   M+ L Q + + + +I   +      +  I 
Sbjct: 581 DSLSGVNLDEEAANMLQLQQAYEAASHIISTADTMFQSILSAIR 624


>gi|326796599|ref|YP_004314419.1| flagellar basal-body rod protein FlgC [Marinomonas mediterranea
           MMB-1]
 gi|326547363|gb|ADZ92583.1| flagellar basal-body rod protein FlgC [Marinomonas mediterranea
           MMB-1]
          Length = 149

 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N + EM  M+  ++ F +   +++  +  M + + 
Sbjct: 103 GYVFYPNVNPVEEMADMMSASRSFQTNVEVMNSAKSMMQKMLS 145



 Score = 39.5 bits (90), Expect = 0.44,   Method: Composition-based stats.
 Identities = 21/93 (22%), Positives = 37/93 (39%), Gaps = 6/93 (6%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQK 55
             F I  +A  A   RL+TVA N++N D+V       +R  K  F+E++     +   +
Sbjct: 4  NNIFAISGSAMSAQTIRLNTVASNIANVDSVASSVDETYRARKPVFAEMMEESMRERGWR 63

Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDA 88
                 +  +  +V   + +   L    E D 
Sbjct: 64 DVSDDDLQSGVGVQVAGIVESDAPLQPRYEPDH 96


>gi|78485814|ref|YP_391739.1| flagellar basal-body rod protein FlgC [Thiomicrospira crunogena
           XCL-2]
 gi|78364100|gb|ABB42065.1| Flagellar basal-body rod protein FlgC [Thiomicrospira crunogena
           XCL-2]
          Length = 136

 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 24/43 (55%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N + EM  M+  ++ + +   +++ +++ +L  I+
Sbjct: 91  GYIYRPNVNVVEEMANMMSASRSYETNIEVLNTSKQLLLRTIQ 133



 Score = 38.7 bits (88), Expect = 0.81,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 26/64 (40%), Gaps = 6/64 (9%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQ 54
          M  + +I      A   RL+T+A NM+N D++       +R+ +  F  ++         
Sbjct: 3  MFPTLDISATGMHAQTVRLNTIASNMANVDSISSNSDETYRSKQPVFKTIMDNETGRPAG 62

Query: 55 KISF 58
           +  
Sbjct: 63 GVMV 66


>gi|66768556|ref|YP_243318.1| flagellar hook-associated protein FlgK [Xanthomonas campestris
          pv. campestris str. 8004]
 gi|66573888|gb|AAY49298.1| flagellar protein [Xanthomonas campestris pv. campestris str.
          8004]
          Length = 624

 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 27/42 (64%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
           +  + G +A +A ++ LSTV+ N++N +T G+   +V+F+ 
Sbjct: 1  MSIMSTGTSALIAFQRALSTVSHNVANINTEGYSRQRVEFAT 42


>gi|56695104|ref|YP_165451.1| flagellar basal body rod protein FlgC [Ruegeria pomeroyi DSS-3]
 gi|56676841|gb|AAV93507.1| flagellar basal-body rod protein FlgC [Ruegeria pomeroyi DSS-3]
          Length = 135

 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/40 (37%), Positives = 22/40 (55%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS 42
           S ++  +A  A   RL  V++N+SN DT G+R   V F 
Sbjct: 11 KSLSVTASALRAQATRLRHVSENISNADTPGYRRKTVPFE 50



 Score = 42.9 bits (99), Expect = 0.038,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 20/47 (42%), Gaps = 3/47 (6%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS---MLEAIRN 240
           G  + SN + M E+       + + +   L D+  +    ++E +R 
Sbjct: 89  GHYQGSNVDLMIEIADAREAQRSYEANLKLFDQARQMSASLMELLRK 135


>gi|212709490|ref|ZP_03317618.1| hypothetical protein PROVALCAL_00532 [Providencia alcalifaciens DSM
           30120]
 gi|212687828|gb|EEB47356.1| hypothetical protein PROVALCAL_00532 [Providencia alcalifaciens DSM
           30120]
          Length = 134

 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 5/43 (11%), Positives = 22/43 (51%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G+++  N +++ EM   I  ++ + +   +++  +  + + + 
Sbjct: 89  GYVKMPNVDTVGEMINTISASRSYQANLEVMNTAKTLLQKTLT 131



 Score = 37.2 bits (84), Expect = 2.2,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 7/58 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSEVVGAIKNDID 53
           + F+I  +A  A  QRL+  A NM+N    VG     +R  +V F  +    +N + 
Sbjct: 4  LSIFDISSSALTAQSQRLNVSASNMANAESVVGPDGEPYRAKQVVFQ-MAPQGRNQVG 60


>gi|197120201|ref|YP_002140628.1| flagellar basal body rod protein FlgC [Geobacter bemidjiensis Bem]
 gi|197089561|gb|ACH40832.1| flagellar basal body rod protein FlgC [Geobacter bemidjiensis Bem]
          Length = 145

 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 20/42 (47%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N N + EM  MI  ++ + +  T    ++   L+ +
Sbjct: 100 GYVAYPNINVVEEMADMITASRSYEANITATQASKSMALKTL 141



 Score = 41.0 bits (94), Expect = 0.15,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 28/77 (36%), Gaps = 8/77 (10%)

Query: 1  MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDI 52
          M   TS +I   A  A   R++ ++ N++N ++     G  +R     F+          
Sbjct: 1  MDFFTSMDISATALAAERTRMNLISSNLANVNSTRTAEGGPYRRKDAVFTATPLKEGASF 60

Query: 53 DQKISFVASGKEYLSKE 69
             +S   S +     +
Sbjct: 61 GAALSQATSARSVQVTQ 77


>gi|304310784|ref|YP_003810382.1| Flagellar basal-body rod protein FlgB [gamma proteobacterium
          HdN1]
 gi|301796517|emb|CBL44725.1| Flagellar basal-body rod protein FlgB [gamma proteobacterium
          HdN1]
          Length = 135

 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 27/55 (49%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65
          A     +R   +++N++N DT GFR   V F +V+G +  D     S V +   +
Sbjct: 15 AMELRGRRAEILSNNLANGDTPGFRARDVDFKDVLGGMLGDPSATPSPVTTQSGH 69


>gi|153001466|ref|YP_001367147.1| flagellar hook-associated protein FlgK [Shewanella baltica OS185]
 gi|151366084|gb|ABS09084.1| flagellar hook-associated protein FlgK [Shewanella baltica OS185]
          Length = 641

 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 28/77 (36%), Gaps = 1/77 (1%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA-IKNDIDQKISFVASGK 63
           NI     LA + +L   ++N++N +T G+       S +    + N      ++V   K
Sbjct: 6  LNIARTGVLASQSQLGVTSNNIANANTAGYHRQVATQSTLESQRLGNSFYGTGTYVNDVK 65

Query: 64 EYLSKEVGSFISTGTEL 80
             +      +  G   
Sbjct: 66 RIYNDYAARELRIGQTT 82



 Score = 38.7 bits (88), Expect = 0.75,   Method: Composition-based stats.
 Identities = 4/41 (9%), Positives = 15/41 (36%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E   ++   Q + +   ++   ++     + ++ 
Sbjct: 601 SGVNLDEEAANLMRFQQAYQASARIMTTAQQIFDTLLSSVR 641


>gi|21231391|ref|NP_637308.1| flagellar hook-associated protein FlgK [Xanthomonas campestris
          pv. campestris str. ATCC 33913]
 gi|188991635|ref|YP_001903645.1| flagellar hook-associated protein FlgK [Xanthomonas campestris
          pv. campestris str. B100]
 gi|21113056|gb|AAM41232.1| flagellar protein [Xanthomonas campestris pv. campestris str.
          ATCC 33913]
 gi|167733395|emb|CAP51596.1| Flagellar hook-associated protein 1 (HAP1) [Xanthomonas
          campestris pv. campestris]
          Length = 624

 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 27/42 (64%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
           +  + G +A +A ++ LSTV+ N++N +T G+   +V+F+ 
Sbjct: 1  MSIMSTGTSALIAFQRALSTVSHNVANINTEGYSRQRVEFAT 42


>gi|54297179|ref|YP_123548.1| flagellar basal body rod protein FlgB [Legionella pneumophila
          str. Paris]
 gi|148358803|ref|YP_001250010.1| flagellar basal body rod protein FlgB [Legionella pneumophila
          str. Corby]
 gi|296106848|ref|YP_003618548.1| flagellar basal-body rod protein FlgB [Legionella pneumophila
          2300/99 Alcoy]
 gi|53750964|emb|CAH12375.1| Flagellar basal-body rod protein FlgB [Legionella pneumophila
          str. Paris]
 gi|148280576|gb|ABQ54664.1| flagellar basal body rod protein FlgB [Legionella pneumophila
          str. Corby]
 gi|295648749|gb|ADG24596.1| flagellar basal-body rod protein FlgB [Legionella pneumophila
          2300/99 Alcoy]
          Length = 130

 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 41/87 (47%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           + F I   A +A +QR S +A+N++N +T  F+   V F+EV+ A      Q++   + 
Sbjct: 6  DSYFGIHAKALIARDQRASVLANNIANVNTPNFKARDVDFNEVLTATMAGNSQQLRVTSD 65

Query: 62 GKEYLSKEVGSFISTGTELDFALEGDA 88
               + +  + +        +L+G+ 
Sbjct: 66 QHISTNADFMTHLKYRMTHHASLDGNT 92


>gi|258511108|ref|YP_003184542.1| flagellar basal-body rod protein FlgB [Alicyclobacillus
          acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257477834|gb|ACV58153.1| flagellar basal-body rod protein FlgB [Alicyclobacillus
          acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 134

 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 20/49 (40%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
           A  A   R +  A+N++N +T G++   V F  ++    +        
Sbjct: 9  NALDASTLRQAVYANNIANAETPGYKRQDVAFETLLQNALSGQASGALG 57


>gi|289606849|emb|CBI60984.1| unnamed protein product [Sordaria macrospora]
          Length = 336

 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 46/128 (35%), Gaps = 3/128 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV-VGAIKNDIDQKISFV 59
           M    +IG +   A +  L+T +DN++N  T G+       +EV VG+ +      ++  
Sbjct: 40  MSDLLSIGASGVRAYQSALTTTSDNIANAGTTGYVRRTTSLAEVGVGSSRQITGSGVTVT 99

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119
              +            + +++  +  G  W A         +R    ++T   +  +   
Sbjct: 100 GVARSADIYRSQEVRQSNSDVSRSDGGIVWMARIEDALT--SRALTDRMTAFFNSATTLS 157

Query: 120 KYPVLDMA 127
             P  D  
Sbjct: 158 ADPSADAP 165


>gi|255021361|ref|ZP_05293409.1| Flagellar hook-associated protein flgK [Acidithiobacillus caldus
          ATCC 51756]
 gi|254969224|gb|EET26738.1| Flagellar hook-associated protein flgK [Acidithiobacillus caldus
          ATCC 51756]
          Length = 684

 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 8/47 (17%), Positives = 17/47 (36%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51
           +  L+     +  L    +N++N +T G+    V  S +       
Sbjct: 8  LSSALSGLQVAQDALQVTGNNIANVNTPGYSQESVVQSSLPTTFLGG 54


>gi|212637783|ref|YP_002314308.1| flagellar basal-body rod protein FlgC [Shewanella piezotolerans
           WP3]
 gi|212559267|gb|ACJ31721.1| Flagellar basal-body rod protein FlgC [Shewanella piezotolerans
           WP3]
          Length = 139

 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 27/48 (56%), Gaps = 1/48 (2%)

Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           +G++  SN N++ EM  M+  ++ F +   +++   +SM + +  + +
Sbjct: 92  QGYVAYSNVNTVEEMADMMAASRSFETSVEVMNRA-RSMQQGLLQLGA 138



 Score = 36.4 bits (82), Expect = 3.4,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 6/51 (11%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKND 51
          I  A   A   RL+TVA N++N           FR +K  FS +    +  
Sbjct: 9  IAGAGMNAQTIRLNTVASNLANAGAAAESPDQAFRALKPVFSTIYKQTQEG 59


>gi|317178281|dbj|BAJ56070.1| flagellar basal body rod protein FlgC [Helicobacter pylori F16]
          Length = 161

 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 19/44 (43%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            +G++   N N++ EM  ++  T+ + +        +     AI
Sbjct: 113 AQGYVAYPNVNAVVEMADLVEATRAYQANVVAFQSAKNMAQNAI 156



 Score = 39.1 bits (89), Expect = 0.52,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 6/49 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44
           +SF+I      A   R + ++ N++N +T     G  +R  +  F   
Sbjct: 3  LSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFKAF 51


>gi|332701538|ref|ZP_08421626.1| flagellar hook-associated protein FlgK [Desulfovibrio africanus
           str. Walvis Bay]
 gi|332551687|gb|EGJ48731.1| flagellar hook-associated protein FlgK [Desulfovibrio africanus
           str. Walvis Bay]
          Length = 696

 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/192 (11%), Positives = 52/192 (27%), Gaps = 16/192 (8%)

Query: 1   MQTSFN-IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE------VVGAIKNDID 53
           M ++   IG  A L  +  ++   +NM+N +T G+    V F+         G + N   
Sbjct: 1   MISNLYYIGANALLNYQTAINVTGNNMANAETAGYSRRTVDFATRTTTDKYYGQVGNGSI 60

Query: 54  QKISFVASGKEYLSKEVGSFISTGTE----LDFALEGDAWFALESPRGII-----LTRDG 104
            +            + +G    +        +       +  +E            T   
Sbjct: 61  IQAIRRNYDSYLEDQYLGQSADSTYWSTVTSNCTAIESLFVQVEDDGLSAVLDSLWTGFE 120

Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
                  G+            +  +   +             EI  +   +  +     +
Sbjct: 121 ALPSDPGGTANRTELLGTAESLTGMLNDLYADMRSEEERMNAEIRDQVNEVNDILGQLAE 180

Query: 165 MSQGFVRRENSG 176
           +++G V    + 
Sbjct: 181 VNKGLVAHPENA 192



 Score = 37.9 bits (86), Expect = 1.3,   Method: Composition-based stats.
 Identities = 5/36 (13%), Positives = 12/36 (33%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            N   E+  +  L   +++   LI    +     + 
Sbjct: 658 VNVNEEVVNLTRLQDAYDAAAKLITTANEMFETVLS 693


>gi|291519599|emb|CBK74820.1| flagellar basal-body rod protein FlgC [Butyrivibrio fibrisolvens
           16/4]
          Length = 151

 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 20/43 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N++ EM  +I  ++ + +  T  D  +      I+
Sbjct: 105 GYVRYPNVNTVTEMTNLIDASRSYEANVTAFDAIKSMAGYGIQ 147



 Score = 45.6 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 34/86 (39%), Gaps = 6/86 (6%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDIDQKISF 58
          F+I      A   R+  +A+N++N  T     G  +R   V F+E          + +  
Sbjct: 7  FDIVATGLTAQRFRMDIIAENIANVSTTRTQNGGPYRRKIVTFTEKNYHAGIPNFKNVLK 66

Query: 59 VASGKEYLSKEVGSFISTGTELDFAL 84
              + Y +    S +S  TE DF +
Sbjct: 67 DKQLRFYGNGVKVSKVSEDTETDFIM 92


>gi|329898292|ref|ZP_08272375.1| Flagellar basal-body rod protein FlgB [gamma proteobacterium
          IMCC3088]
 gi|328920857|gb|EGG28300.1| Flagellar basal-body rod protein FlgB [gamma proteobacterium
          IMCC3088]
          Length = 124

 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/50 (34%), Positives = 26/50 (52%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50
          M + F +   A +   QRL  +A N++N DT GF+   V F +V+ A   
Sbjct: 1  MNSIFGVHEQALVLKSQRLQVLAKNIANADTPGFKARDVDFKQVLAAQAG 50


>gi|34557980|ref|NP_907795.1| flagellar basal body rod protein FlgC [Wolinella succinogenes DSM
           1740]
 gi|34483698|emb|CAE10695.1| FLAGELLAR BASAL-BODY ROD PROTEIN FLGC PROXIMAL ROD PROTEIN
           [Wolinella succinogenes]
          Length = 164

 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 18/43 (41%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N + EM  +I  T+ + +  +     +     A+ 
Sbjct: 118 GYVAYPNINPVVEMADLIEATRAYQANVSAFQSAKNMASTALT 160



 Score = 41.0 bits (94), Expect = 0.14,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 23/49 (46%), Gaps = 6/49 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44
           +SF+I      A   R++ ++ N++N +T     G  +R  +V F   
Sbjct: 4  LSSFDISGYGLSAQRFRVNMISSNIANANTTRTDEGGPYRRKEVIFKAF 52


>gi|120598238|ref|YP_962812.1| flagellar hook-associated protein FlgK [Shewanella sp. W3-18-1]
 gi|120558331|gb|ABM24258.1| flagellar hook-associated protein FlgK [Shewanella sp. W3-18-1]
          Length = 641

 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 27/80 (33%), Gaps = 1/80 (1%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA-IKNDIDQKISFVA 60
              NI     LA + +L   ++N++N +T G+       S +      N      ++V 
Sbjct: 3  IDLLNIARTGVLASQSQLGVTSNNIANANTAGYHRQVATQSTLESQRFGNSFYGTGTYVD 62

Query: 61 SGKEYLSKEVGSFISTGTEL 80
            K   +      +  G   
Sbjct: 63 DVKRIYNDYAARELRIGQTT 82



 Score = 38.7 bits (88), Expect = 0.69,   Method: Composition-based stats.
 Identities = 4/41 (9%), Positives = 15/41 (36%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E   ++   Q + +   ++   ++     + ++ 
Sbjct: 601 SGVNLDEEAANLMRFQQAYQASARIMTTAQQIFDTLLTSVR 641


>gi|304409972|ref|ZP_07391591.1| flagellar hook-associated protein FlgK [Shewanella baltica OS183]
 gi|307302315|ref|ZP_07582073.1| flagellar hook-associated protein FlgK [Shewanella baltica BA175]
 gi|304351381|gb|EFM15780.1| flagellar hook-associated protein FlgK [Shewanella baltica OS183]
 gi|306914353|gb|EFN44774.1| flagellar hook-associated protein FlgK [Shewanella baltica BA175]
          Length = 641

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 28/77 (36%), Gaps = 1/77 (1%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA-IKNDIDQKISFVASGK 63
           NI     LA + +L   ++N++N +T G+       S +    + N      ++V   K
Sbjct: 6  LNIARTGVLASQSQLGVTSNNIANANTAGYHRQVATQSTLESQRLGNSFYGTGTYVNDVK 65

Query: 64 EYLSKEVGSFISTGTEL 80
             +      +  G   
Sbjct: 66 RIYNDYAARELRIGQTT 82



 Score = 38.3 bits (87), Expect = 0.82,   Method: Composition-based stats.
 Identities = 4/41 (9%), Positives = 15/41 (36%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E   ++   Q + +   ++   ++     + ++ 
Sbjct: 601 SGVNLDEEAANLMRFQQAYQASARIMTTAQQIFDTLLSSVR 641


>gi|160876197|ref|YP_001555513.1| flagellar hook-associated protein FlgK [Shewanella baltica OS195]
 gi|160861719|gb|ABX50253.1| flagellar hook-associated protein FlgK [Shewanella baltica OS195]
 gi|315268387|gb|ADT95240.1| flagellar hook-associated protein FlgK [Shewanella baltica OS678]
          Length = 641

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 28/77 (36%), Gaps = 1/77 (1%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA-IKNDIDQKISFVASGK 63
           NI     LA + +L   ++N++N +T G+       S +    + N      ++V   K
Sbjct: 6  LNIARTGVLASQSQLGVTSNNIANANTAGYHRQVATQSTLESQRLGNSFYGTGTYVNDVK 65

Query: 64 EYLSKEVGSFISTGTEL 80
             +      +  G   
Sbjct: 66 RIYNDYAARELRIGQTT 82



 Score = 38.3 bits (87), Expect = 0.82,   Method: Composition-based stats.
 Identities = 4/41 (9%), Positives = 15/41 (36%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E   ++   Q + +   ++   ++     + ++ 
Sbjct: 601 SGVNLDEEAANLMRFQQAYQASARIMTTAQQIFDTLLSSVR 641


>gi|126175140|ref|YP_001051289.1| flagellar hook-associated protein FlgK [Shewanella baltica OS155]
 gi|125998345|gb|ABN62420.1| flagellar hook-associated protein FlgK [Shewanella baltica OS155]
          Length = 641

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 28/77 (36%), Gaps = 1/77 (1%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA-IKNDIDQKISFVASGK 63
           NI     LA + +L   ++N++N +T G+       S +    + N      ++V   K
Sbjct: 6  LNIARTGVLASQSQLGVTSNNIANANTAGYHRQVATQSTLESQRLGNSFYGTGTYVNDVK 65

Query: 64 EYLSKEVGSFISTGTEL 80
             +      +  G   
Sbjct: 66 RIYNDYAARELRIGQTT 82



 Score = 38.3 bits (87), Expect = 0.83,   Method: Composition-based stats.
 Identities = 4/41 (9%), Positives = 15/41 (36%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E   ++   Q + +   ++   ++     + ++ 
Sbjct: 601 SGVNLDEEAANLMRFQQAYQASARIMTTAQQIFDTLLSSVR 641


>gi|325982373|ref|YP_004294775.1| flagellar basal-body rod protein FlgC [Nitrosomonas sp. AL212]
 gi|325531892|gb|ADZ26613.1| flagellar basal-body rod protein FlgC [Nitrosomonas sp. AL212]
          Length = 133

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 6/44 (13%), Positives = 21/44 (47%)

Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            G++   N N + EM  M+  ++ + +   +++  +  + + + 
Sbjct: 87  SGYVTMPNVNVVDEMVNMMSASRSYQNSVDMMNTTKSLLQKTLT 130



 Score = 40.6 bits (93), Expect = 0.20,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 39/118 (33%), Gaps = 6/118 (5%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNT----DTVG--FRTIKVKFSEVVGAIKNDIDQKI 56
             F I  +A  A  QRL+ VA N+SN      + G  +R  +V FS +          K+
Sbjct: 4   NVFGIASSAMSAQSQRLNVVASNLSNADSVTSSTGEPYRGRQVVFSTLRADANGAAGVKV 63

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSL 114
           + V      + +             +    +     E    +  +R  +  V    + 
Sbjct: 64  AGVIHDPSPMRQVFEPNHPFANTSGYVTMPNVNVVDEMVNMMSASRSYQNSVDMMNTT 121


>gi|78358192|ref|YP_389641.1| flagellar hook-associated protein [Desulfovibrio desulfuricans
          subsp. desulfuricans str. G20]
 gi|78220597|gb|ABB39946.1| Flagellar hook-associated protein [Desulfovibrio desulfuricans
          subsp. desulfuricans str. G20]
          Length = 696

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 10/77 (12%), Positives = 28/77 (36%), Gaps = 2/77 (2%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE--VVGAIKNDIDQKISFV 59
           +  ++G  A  A +  + T  +N++N +T G+    V+F     +      +   +   
Sbjct: 4  NSLLSVGKDALFASQSAIQTTGNNIANVNTPGYSRQAVRFEAKTPIDWKPGQMGTGVKAA 63

Query: 60 ASGKEYLSKEVGSFIST 76
             + + +     +   
Sbjct: 64 EVFRYFNTFIEQEYHDH 80



 Score = 39.5 bits (90), Expect = 0.38,   Method: Composition-based stats.
 Identities = 4/35 (11%), Positives = 13/35 (37%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            N   EM  ++     + +   L+   ++ +   +
Sbjct: 658 VNLDEEMSSLVKFQHSYKAAAKLVTTADEMLQVLL 692


>gi|15964413|ref|NP_384766.1| flagellar basal body rod protein FlgC [Sinorhizobium meliloti 1021]
 gi|307311555|ref|ZP_07591196.1| flagellar basal-body rod protein FlgC [Sinorhizobium meliloti
           BL225C]
 gi|307318910|ref|ZP_07598341.1| flagellar basal-body rod protein FlgC [Sinorhizobium meliloti AK83]
 gi|17380478|sp|Q52944|FLGC_RHIME RecName: Full=Flagellar basal-body rod protein flgC
 gi|15073590|emb|CAC45232.1| Flagellar basal-body rod protein [Sinorhizobium meliloti 1021]
 gi|306895324|gb|EFN26079.1| flagellar basal-body rod protein FlgC [Sinorhizobium meliloti AK83]
 gi|306899572|gb|EFN30201.1| flagellar basal-body rod protein FlgC [Sinorhizobium meliloti
           BL225C]
          Length = 139

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/99 (14%), Positives = 33/99 (33%)

Query: 145 KGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNA 204
            G    + K I+             V  E  G   +      +  +    ++G ++  N 
Sbjct: 39  PGADPFRRKTISFAAEVDRASGASLVEVERLGTDDSDFNIEFDPGNPAADEKGMVKLPNV 98

Query: 205 NSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           N + EM  M    + + +    I ++   + + I  + +
Sbjct: 99  NILIEMADMREANRAYEANLQTIKQSRDLISQTIDLLRA 137



 Score = 43.7 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 23/60 (38%), Gaps = 10/60 (16%)

Query: 1  MQ---TSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKN 50
          M    ++  +  +   A   RL  V++N++N  + G       FR   + F+  V     
Sbjct: 1  MDPLTSALKVSASGLQAESTRLRIVSENIANARSTGDAPGADPFRRKTISFAAEVDRASG 60


>gi|114046844|ref|YP_737394.1| flagellar hook-associated protein FlgK [Shewanella sp. MR-7]
 gi|113888286|gb|ABI42337.1| flagellar hook-associated protein FlgK [Shewanella sp. MR-7]
          Length = 641

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 29/80 (36%), Gaps = 1/80 (1%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA-IKNDIDQKISFVA 60
              NI     LA + +L   ++N++N +T G+       + +    + N      ++V+
Sbjct: 3  IDLLNIARTGVLASQSQLGVTSNNIANANTAGYHRQVATQTTLDSQRLGNSFYGTGTYVS 62

Query: 61 SGKEYLSKEVGSFISTGTEL 80
            K   +      +  G   
Sbjct: 63 DVKRIYNDYAARELRIGQTT 82



 Score = 38.7 bits (88), Expect = 0.74,   Method: Composition-based stats.
 Identities = 4/41 (9%), Positives = 15/41 (36%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E   ++   Q + +   ++   ++     + ++ 
Sbjct: 601 SGVNLDEEAANLMRFQQAYQASARIMSTAQQIFDTLLTSVR 641


>gi|322421737|ref|YP_004200960.1| flagellar basal-body rod protein FlgC [Geobacter sp. M18]
 gi|320128124|gb|ADW15684.1| flagellar basal-body rod protein FlgC [Geobacter sp. M18]
          Length = 145

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 20/46 (43%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G++   N N + EM  MI  ++ + +  T     +   L+ +  + 
Sbjct: 100 GYVAYPNINVVEEMADMITASRSYEANITATQAAKSMALKTLDLLR 145



 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 29/82 (35%), Gaps = 8/82 (9%)

Query: 1  MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDI 52
          M   TS +I  +A  A   R++ ++ N++N ++     G  +R     F+          
Sbjct: 1  MDFFTSMDISASALAAERTRMNLISSNLANVNSTRTAEGGPYRRKDAVFTATPVTEGKSF 60

Query: 53 DQKISFVASGKEYLSKEVGSFI 74
             +S     +     ++    
Sbjct: 61 GAALSRANEARSVQVTQINEDQ 82


>gi|284007175|emb|CBA72461.1| flagellar basal body rod protein FlgC [Arsenophonus nasoniae]
          Length = 135

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 7/45 (15%), Positives = 21/45 (46%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +RG++   N +   EM   I  ++ + +   +++  +  M + + 
Sbjct: 88  QRGYIRKPNVDVTAEMINPISASRSYQANIEVMNTTKSLMQKTLT 132


>gi|256833244|ref|YP_003161971.1| flagellar basal-body rod protein FlgB [Jonesia denitrificans DSM
          20603]
 gi|256686775|gb|ACV09668.1| flagellar basal-body rod protein FlgB [Jonesia denitrificans DSM
          20603]
          Length = 113

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 35/80 (43%), Gaps = 1/80 (1%)

Query: 2  QTSFNIGL-AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           +   + L +A   L QR   +A+N++N +T  F   +V+F + +       +  ++   
Sbjct: 3  DSVTYVALNSALDGLAQRQRVIANNVANINTPNFHAQRVQFEDELSRQVQRGNGAVTPTV 62

Query: 61 SGKEYLSKEVGSFISTGTEL 80
                ++  G+ ++  TE 
Sbjct: 63 QRSLEPTRLDGNNVNLDTET 82


>gi|296534150|ref|ZP_06896646.1| flagellar basal-body rod protein FlgC [Roseomonas cervicalis ATCC
           49957]
 gi|296265526|gb|EFH11655.1| flagellar basal-body rod protein FlgC [Roseomonas cervicalis ATCC
           49957]
          Length = 136

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/136 (12%), Positives = 43/136 (31%)

Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
           +  + +L  ++            +     +        G    + K +         +  
Sbjct: 1   MDLERALSVSASGMSAQSARLRVVAENVANRDSTGETPGAEPYRRKTVTFANRLDRALGA 60

Query: 168 GFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
             VR    G +    P   +        RG++   N +SM EM  M    + +++  +++
Sbjct: 61  ETVRVARIGTAAGNFPEQYDPQHPAADARGYVRKPNVDSMVEMMDMREAQRSYSANLSVL 120

Query: 228 DENEKSMLEAIRNIAS 243
           +     +  AI  + +
Sbjct: 121 ETTRAMIQRAIDLLRA 136



 Score = 45.2 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 39/119 (32%), Gaps = 13/119 (10%)

Query: 1   MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFS----EVVGA 47
           M    + ++  +   A   RL  VA+N++N D+ G       +R   V F+      +GA
Sbjct: 1   MDLERALSVSASGMSAQSARLRVVAENVANRDSTGETPGAEPYRRKTVTFANRLDRALGA 60

Query: 48  IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106
               + +  +   +  E    +  +  + G      ++               + +   
Sbjct: 61  ETVRVARIGTAAGNFPEQYDPQHPAADARGYVRKPNVDSMVEMMDMREAQRSYSANLSV 119


>gi|283780143|ref|YP_003370898.1| flagellar hook-associated protein FlgK [Pirellula staleyi DSM
          6068]
 gi|283438596|gb|ADB17038.1| flagellar hook-associated protein FlgK [Pirellula staleyi DSM
          6068]
          Length = 565

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 11/82 (13%), Positives = 26/82 (31%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           ++  I   + +A +  L  V +N++N +T G+   +V  +         +   +     
Sbjct: 4  LSTLQIANNSLIASQLGLQVVGNNIANANTPGYIRQQVVLTPAPTQRYGGLLLGLGVEVQ 63

Query: 62 GKEYLSKEVGSFISTGTELDFA 83
               +             D A
Sbjct: 64 AVIQQTDRFLEERLRSALSDLA 85



 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/55 (18%), Positives = 18/55 (32%), Gaps = 5/55 (9%)

Query: 190 SGVTVKRGFLED-----SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            G  V +  LE      +  N   E  +MI   + F +   +I      +   + 
Sbjct: 510 EGYRVFQNTLEGQLLAITGVNLDEEAVRMIQYQRTFQASARVISTINDLLEVLVN 564


>gi|15616944|ref|NP_240157.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219682252|ref|YP_002468636.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str.
           Tuc7 (Acyrthosiphon pisum)]
 gi|11386805|sp|P57420|FLGC_BUCAI RecName: Full=Flagellar basal-body rod protein flgC
 gi|25298910|pir||C84969 flagellar basal-body rod protein flgC [imported] - Buchnera sp.
           (strain APS)
 gi|10039009|dbj|BAB13043.1| flagellar basal-body rod protein flgC [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219621985|gb|ACL30141.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str.
           Tuc7 (Acyrthosiphon pisum)]
 gi|311086076|gb|ADP66158.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str.
           LL01 (Acyrthosiphon pisum)]
 gi|311086647|gb|ADP66728.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str.
           TLW03 (Acyrthosiphon pisum)]
 gi|311087233|gb|ADP67313.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str.
           JF99 (Acyrthosiphon pisum)]
 gi|311087752|gb|ADP67831.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str.
           JF98 (Acyrthosiphon pisum)]
          Length = 136

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 20/43 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++  SN N + EM   I   + + +   ++   +  +++ + 
Sbjct: 91  GYILASNVNPITEMVNNIAAARSYQANIEVLKTAKSMIMKTLT 133



 Score = 41.8 bits (96), Expect = 0.078,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 21/34 (61%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFR 35
             FNI  +A +A  Q+L+ +A N++N D+  ++
Sbjct: 4  LNIFNIAGSAMIAQSQKLNVIASNLANMDSTIYK 37


>gi|302669847|ref|YP_003829807.1| flagellar hook-associated protein FlgK2 [Butyrivibrio
          proteoclasticus B316]
 gi|302394320|gb|ADL33225.1| flagellar hook-associated protein FlgK2 [Butyrivibrio
          proteoclasticus B316]
          Length = 615

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 19/37 (51%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
            NI  +   A    L+T A+N++N +T G+   KV 
Sbjct: 7  GLNIAASGLRASNASLNTTANNIANANTDGYSRQKVT 43


>gi|219681697|ref|YP_002468083.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|257471393|ref|ZP_05635392.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str.
           LSR1 (Acyrthosiphon pisum)]
 gi|219624540|gb|ACL30695.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
          Length = 136

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 20/43 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++  SN N + EM   I   + + +   ++   +  +++ + 
Sbjct: 91  GYILASNVNPITEMVNNIAAARSYQANIEVLKTAKSMIMKTLT 133



 Score = 41.8 bits (96), Expect = 0.078,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 21/34 (61%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFR 35
             FNI  +A +A  Q+L+ +A N++N D+  ++
Sbjct: 4  LNIFNIAGSAMIAQSQKLNVIASNLANMDSTIYK 37


>gi|217972604|ref|YP_002357355.1| flagellar hook-associated protein FlgK [Shewanella baltica OS223]
 gi|217497739|gb|ACK45932.1| flagellar hook-associated protein FlgK [Shewanella baltica OS223]
          Length = 641

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 28/77 (36%), Gaps = 1/77 (1%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA-IKNDIDQKISFVASGK 63
           NI     LA + +L   ++N++N +T G+       S +    + N      ++V   K
Sbjct: 6  LNIARTGVLASQSQLGVTSNNIANANTAGYHRQVATQSTLESQRLGNSFYGTGTYVNDVK 65

Query: 64 EYLSKEVGSFISTGTEL 80
             +      +  G   
Sbjct: 66 RIYNDYAARELRIGQTT 82



 Score = 38.3 bits (87), Expect = 0.84,   Method: Composition-based stats.
 Identities = 4/41 (9%), Positives = 15/41 (36%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E   ++   Q + +   ++   ++     + ++ 
Sbjct: 601 SGVNLDEEAANLMRFQQAYQASARIMTTAQQIFDTLLSSVR 641


>gi|326389602|ref|ZP_08211168.1| flagellar hook-associated protein FlgK [Thermoanaerobacter
          ethanolicus JW 200]
 gi|325994317|gb|EGD52743.1| flagellar hook-associated protein FlgK [Thermoanaerobacter
          ethanolicus JW 200]
          Length = 482

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 7/54 (12%), Positives = 17/54 (31%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56
              I        ++ L     N++N +T G+    V  + +       +  + 
Sbjct: 5  QGLEIAKTGLFVSQKALDVTGHNIANANTPGYTRQVVDMASIAPPTTFGMYDQW 58



 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 6/41 (14%), Positives = 16/41 (39%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  +   EM  M+   + + +   +I   ++ +   I  + 
Sbjct: 438 SGVSLDEEMTNMLKYQKSYVASARVITVMDELLDTLINRMG 478


>gi|113969612|ref|YP_733405.1| flagellar hook-associated protein FlgK [Shewanella sp. MR-4]
 gi|113884296|gb|ABI38348.1| flagellar hook-associated protein FlgK [Shewanella sp. MR-4]
          Length = 641

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 29/80 (36%), Gaps = 1/80 (1%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA-IKNDIDQKISFVA 60
              NI     LA + +L   ++N++N +T G+       + +    + N      ++V+
Sbjct: 3  IDLLNIARTGVLASQSQLGVTSNNIANANTAGYHRQVATQTTLDSQRLGNSFYGTGTYVS 62

Query: 61 SGKEYLSKEVGSFISTGTEL 80
            K   +      +  G   
Sbjct: 63 DVKRIYNDYAARELRIGQTT 82



 Score = 38.7 bits (88), Expect = 0.77,   Method: Composition-based stats.
 Identities = 4/41 (9%), Positives = 15/41 (36%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E   ++   Q + +   ++   ++     + ++ 
Sbjct: 601 SGVNLDEEAANLMRFQQAYQASARIMSTAQQIFDTLLTSVR 641


>gi|255023253|ref|ZP_05295239.1| flagellar hook protein FlgE [Listeria monocytogenes FSL J1-208]
          Length = 243

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/78 (15%), Positives = 22/78 (28%), Gaps = 5/78 (6%)

Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMY 208
            +A + + +     G V+  N    P +                 +    LE SN +   
Sbjct: 160 PVAQLAVATFSNEDGLVKMGNGEYVPGLSSGDAVYGVAGQNGAGGISGSSLEGSNVDLSR 219

Query: 209 EMGQMIHLTQKFNSITTL 226
           E   ++     F     L
Sbjct: 220 EFVNLMTYQSGFQGTQKL 237


>gi|298507071|gb|ADI85794.1| flagellar hook-associated protein FlgK [Geobacter sulfurreducens
          KN400]
          Length = 477

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 20/52 (38%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
           +  +I  +   A    L   ++N++N +T G+      F+    + +    
Sbjct: 4  LSLLDIAKSGITAQRLALEVTSENITNVNTPGYSKQTTVFTTATVSQERGFP 55



 Score = 39.1 bits (89), Expect = 0.55,   Method: Composition-based stats.
 Identities = 7/38 (18%), Positives = 14/38 (36%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            S  +   E+  +I   + F     LI+   + M   +
Sbjct: 436 QSGVSLDEELANLIKYQKAFEGAAKLINTGTEMMDVIL 473


>gi|260431752|ref|ZP_05785723.1| flagellar basal-body rod protein FlgC [Silicibacter
          lacuscaerulensis ITI-1157]
 gi|260415580|gb|EEX08839.1| flagellar basal-body rod protein FlgC [Silicibacter
          lacuscaerulensis ITI-1157]
          Length = 128

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 30/88 (34%), Gaps = 6/88 (6%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV------VGAIKNDIDQKI 56
           S  +  +A  A   RL  V++N+SN DT G+R   V F  V      +         + 
Sbjct: 6  KSLEVTASALRAQAARLRHVSENISNADTPGYRRKTVPFEAVHKDGADLVQAGRVRLDQS 65

Query: 57 SFVASGKEYLSKEVGSFISTGTELDFAL 84
                         S    G+ +D  +
Sbjct: 66 KLSRIYDPGHPLADESGHYQGSNVDLMI 93



 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 20/48 (41%), Gaps = 3/48 (6%)

Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS---MLEAIRN 240
            G  + SN + M E+       + + +   + D+  +    ++E +R 
Sbjct: 81  SGHYQGSNVDLMIEIADAREAQRSYEANLKMFDQARQMSSSLMELLRK 128


>gi|254511648|ref|ZP_05123715.1| flagellar basal-body rod protein FlgC [Rhodobacteraceae bacterium
          KLH11]
 gi|221535359|gb|EEE38347.1| flagellar basal-body rod protein FlgC [Rhodobacteraceae bacterium
          KLH11]
          Length = 128

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 31/87 (35%), Gaps = 6/87 (6%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV------VGAIKNDIDQKIS 57
          S     +A  A   RL  V++N+SN DT G+R   V F  V      +  + +    +  
Sbjct: 7  SLTASASALRAQAARLRHVSENISNADTPGYRRKTVPFETVKRGGAELVQVGHVKLDRRD 66

Query: 58 FVASGKEYLSKEVGSFISTGTELDFAL 84
                        +    G+ +D  +
Sbjct: 67 PGQIYDPGHPMADEAGYYRGSNVDLMI 93



 Score = 43.7 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 7/55 (12%), Positives = 19/55 (34%)

Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
              P    +    +  + G+   SN + M E+       + + +   + D+  + 
Sbjct: 64  RRDPGQIYDPGHPMADEAGYYRGSNVDLMIEIADAREAQRSYEANLKMFDQTRQM 118


>gi|315127347|ref|YP_004069350.1| flagellar hook-associated [Pseudoalteromonas sp. SM9913]
 gi|315015861|gb|ADT69199.1| flagellar hook-associated [Pseudoalteromonas sp. SM9913]
          Length = 668

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/93 (16%), Positives = 36/93 (38%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
             NI  +   A  + L T + N++N +T G+   + +F+ ++                 
Sbjct: 4  NLLNIANSGIRANSELLQTTSKNIANVNTEGYVRERTEFTTMIDNQVGRGQTYRLLNEFA 63

Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESP 95
          ++ L+++  +       +  A   D  F+ +S 
Sbjct: 64 QKQLNRDTSNKSFFDQFVSEASRVDQIFSEKSN 96


>gi|52841448|ref|YP_095247.1| flagellar basal body rod protein FlgB [Legionella pneumophila
          subsp. pneumophila str. Philadelphia 1]
 gi|54294160|ref|YP_126575.1| flagellar basal body rod protein FlgB [Legionella pneumophila
          str. Lens]
 gi|52628559|gb|AAU27300.1| flagellar basal body rod protein FlgB [Legionella pneumophila
          subsp. pneumophila str. Philadelphia 1]
 gi|53753992|emb|CAH15463.1| Flagellar basal-body rod protein FlgB [Legionella pneumophila
          str. Lens]
 gi|307609974|emb|CBW99503.1| flagellar basal-body rod protein FlgB [Legionella pneumophila
          130b]
          Length = 130

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 41/87 (47%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           + F I   A +A +QR S +A+N++N +T  F+   V F+EV+ A      Q++   + 
Sbjct: 6  DSYFGIHAKALIARDQRASVLANNIANVNTPNFKARDVDFNEVLTATMAGNSQQLRVTSD 65

Query: 62 GKEYLSKEVGSFISTGTELDFALEGDA 88
               + +  + +        +L+G+ 
Sbjct: 66 QHINTNADFMTHLKYRMTHHASLDGNT 92


>gi|187934928|ref|YP_001885009.1| flagellar hook-associated protein FlgK [Clostridium botulinum B
           str. Eklund 17B]
 gi|187723081|gb|ACD24302.1| flagellar hook-associated protein FlgK [Clostridium botulinum B
           str. Eklund 17B]
          Length = 604

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 7/48 (14%), Positives = 18/48 (37%), Gaps = 5/48 (10%)

Query: 199 LED-----SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           LE      S  +   EM  +I     +++   ++   ++ +   I  +
Sbjct: 555 LEMQKLSVSGVSLDEEMTNLIQFQHAYSANAKVVSTVDELLDVVINGL 602



 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 7/34 (20%), Positives = 16/34 (47%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
          +        +  ++T + N++N +TVGF   +  
Sbjct: 10 VAKRGLNVQQGAINTTSHNIANANTVGFSRQRAV 43


>gi|303240291|ref|ZP_07326810.1| flagellar basal-body rod protein FlgB [Acetivibrio cellulolyticus
          CD2]
 gi|302592201|gb|EFL61930.1| flagellar basal-body rod protein FlgB [Acetivibrio cellulolyticus
          CD2]
          Length = 137

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 31/84 (36%), Gaps = 6/84 (7%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN------DIDQKISFVASGKE 64
          +  A   R   +A N++N DT G++   V F E +    +              +A G  
Sbjct: 15 SLDATATRNEVIAQNIANVDTPGYKRKTVSFEEQLSDAISKNSSFKGRRTDPRHIAIGGS 74

Query: 65 YLSKEVGSFISTGTELDFALEGDA 88
             +   +     + LD  L+G+ 
Sbjct: 75 SADEVKINVSEDKSSLDMRLDGNN 98


>gi|117919778|ref|YP_868970.1| flagellar hook-associated protein FlgK [Shewanella sp. ANA-3]
 gi|117612110|gb|ABK47564.1| flagellar hook-associated protein FlgK [Shewanella sp. ANA-3]
          Length = 641

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 10/79 (12%), Positives = 25/79 (31%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
              NI     LA + +L   ++N++N +T G+       S +      +          
Sbjct: 3  IDLLNIARTGVLASQSQLGVTSNNIANANTAGYHRQVATQSTLESQRLGNSFYGTGTYVD 62

Query: 62 GKEYLSKEVGSFISTGTEL 80
            + +  +  +      + 
Sbjct: 63 DVKRIYNDYAARELRIGQT 81



 Score = 38.7 bits (88), Expect = 0.81,   Method: Composition-based stats.
 Identities = 4/41 (9%), Positives = 15/41 (36%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E   ++   Q + +   ++   ++     + ++ 
Sbjct: 601 SGVNLDEEAANLMRFQQAYQASARIMTTAQQIFDTLLTSVR 641


>gi|325923280|ref|ZP_08184953.1| flagellar hook-associated protein FlgK [Xanthomonas gardneri ATCC
          19865]
 gi|325546207|gb|EGD17388.1| flagellar hook-associated protein FlgK [Xanthomonas gardneri ATCC
          19865]
          Length = 624

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 27/42 (64%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
           +  + G +A +A ++ LSTV+ N++N +T G+   +V+F+ 
Sbjct: 1  MSIMSTGTSALIAFQRALSTVSHNVANINTEGYSRQRVEFAT 42


>gi|90579907|ref|ZP_01235715.1| flagellar basal body rod protein [Vibrio angustum S14]
 gi|90438792|gb|EAS63975.1| flagellar basal body rod protein [Vibrio angustum S14]
          Length = 138

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 24/43 (55%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           GF+   N N M EM  MI  ++ + +   + D +++ +++ ++
Sbjct: 93  GFIYKPNVNVMEEMANMISASRSYQNNVQVADASKQMLMKTLQ 135


>gi|218133658|ref|ZP_03462462.1| hypothetical protein BACPEC_01527 [Bacteroides pectinophilus ATCC
           43243]
 gi|217991033|gb|EEC57039.1| hypothetical protein BACPEC_01527 [Bacteroides pectinophilus ATCC
           43243]
          Length = 149

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 19/42 (45%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N N + EM  +I  T+ + +  T  +  +    + +
Sbjct: 103 GYVTYPNVNVVQEMTDLIDATRSYEANVTAFNAGKSMATKGL 144



 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 8/28 (28%), Positives = 15/28 (53%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTV 32
          FNI  +   A   R   +++N++N +T 
Sbjct: 7  FNIASSGMTAQRLRTDVISENIANVNTT 34


>gi|119775444|ref|YP_928184.1| flagellar hook-associated protein [Shewanella amazonensis SB2B]
 gi|119767944|gb|ABM00515.1| flagellar hook-associated protein [Shewanella amazonensis SB2B]
          Length = 638

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 9/51 (17%), Positives = 20/51 (39%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
              NI     LA + +L   ++N++N +T G+       +  +     + 
Sbjct: 3  IDLLNIARTGVLASQAQLGVTSNNIANVNTEGYNRQVATQATHLSQRSGNS 53



 Score = 35.6 bits (80), Expect = 5.7,   Method: Composition-based stats.
 Identities = 5/38 (13%), Positives = 13/38 (34%)

Query: 200 EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
           E S  N   E   ++   Q + +   ++   ++     
Sbjct: 596 EVSGVNLDEEAANLLRFQQSYQASARIMTTAQQIFDTL 633


>gi|39998134|ref|NP_954085.1| flagellar hook-associated protein FlgK [Geobacter sulfurreducens
          PCA]
 gi|39985080|gb|AAR36435.1| flagellar hook-associated protein FlgK [Geobacter sulfurreducens
          PCA]
          Length = 477

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 20/52 (38%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
           +  +I  +   A    L   ++N++N +T G+      F+    + +    
Sbjct: 4  LSLLDIAKSGITAQRLALEVTSENITNVNTPGYSKQTTVFTTATVSQERGFP 55



 Score = 39.1 bits (89), Expect = 0.57,   Method: Composition-based stats.
 Identities = 7/38 (18%), Positives = 14/38 (36%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            S  +   E+  +I   + F     LI+   + M   +
Sbjct: 436 QSGVSLDEELANLIKYQKAFEGAAKLINTGTEMMDVIL 473


>gi|57242334|ref|ZP_00370273.1| flagellar basal-body rod protein FlgC [Campylobacter upsaliensis
           RM3195]
 gi|315638445|ref|ZP_07893622.1| flagellar basal-body rod protein FlgC [Campylobacter upsaliensis
           JV21]
 gi|57017014|gb|EAL53796.1| flagellar basal-body rod protein FlgC [Campylobacter upsaliensis
           RM3195]
 gi|315481436|gb|EFU72063.1| flagellar basal-body rod protein FlgC [Campylobacter upsaliensis
           JV21]
          Length = 164

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 18/42 (42%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N N + EM  +I  T+ + +  +     +     AI
Sbjct: 118 GYVAFPNVNPVIEMADLIEATRAYQANVSAFTSAKTIAQSAI 159



 Score = 39.9 bits (91), Expect = 0.29,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 17/39 (43%), Gaps = 6/39 (15%)

Query: 11 AQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43
             A   R++ ++ N++N  T     G  +R  +V F  
Sbjct: 13 GLSAQRFRMNVISSNIANAQTTRTAEGGPYRRREVIFKA 51


>gi|182418344|ref|ZP_02949639.1| flagellar hook-associated protein FlgK [Clostridium butyricum 5521]
 gi|237666652|ref|ZP_04526637.1| flagellar hook-associated protein FlgK [Clostridium butyricum E4
           str. BoNT E BL5262]
 gi|182377726|gb|EDT75270.1| flagellar hook-associated protein FlgK [Clostridium butyricum 5521]
 gi|237657851|gb|EEP55406.1| flagellar hook-associated protein FlgK [Clostridium butyricum E4
           str. BoNT E BL5262]
          Length = 610

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 18/43 (41%)

Query: 199 LEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           L +S  +   EM  +I     + +   +I+  ++ +   I  +
Sbjct: 566 LSESGVSLDEEMADLIQFQHSYQANAKMINTVDELLDVVINGL 608



 Score = 42.5 bits (98), Expect = 0.049,   Method: Composition-based stats.
 Identities = 5/34 (14%), Positives = 15/34 (44%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
          +        +  ++T + N++N+ T G+   +  
Sbjct: 10 VAKRGLSVQQGNINTTSHNLANSQTAGYSRQRAV 43


>gi|120554031|ref|YP_958382.1| flagellar basal body rod protein FlgC [Marinobacter aquaeolei VT8]
 gi|120323880|gb|ABM18195.1| flagellar basal-body rod protein FlgC [Marinobacter aquaeolei VT8]
          Length = 149

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 19/43 (44%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N + EM  M+  ++ F     +++  +  M   + 
Sbjct: 103 GYVYYPNVNVVEEMADMMSSSRSFQMNVDVMNTAKSMMQRILT 145



 Score = 39.5 bits (90), Expect = 0.44,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 34/92 (36%), Gaps = 6/92 (6%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDT------VGFRTIKVKFSEVVGAIKNDIDQKI 56
            F+I  +   A   RL+T A N++N +T        +R  K  F+ +  A+ N   Q  
Sbjct: 5  NIFDIAGSGMTAQSLRLNTTASNIANAETASSSTDTTYRARKPVFAAIQQAMLNPDQQGF 64

Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDA 88
             +         V   + +  EL    E + 
Sbjct: 65 GMGSEEGPGAGVRVEGIVESDAELQMRYEPNH 96


>gi|323697455|ref|ZP_08109367.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           sp. ND132]
 gi|323457387|gb|EGB13252.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           desulfuricans ND132]
          Length = 108

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 22/44 (50%)

Query: 199 LEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           +E SN +   EM  MI  ++ F + TT I  +E+     +  IA
Sbjct: 65  VETSNTDVGREMVDMIVTSRAFEANTTFIRASEEMTGHLLDMIA 108



 Score = 45.6 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 29/81 (35%)

Query: 9  LAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSK 68
          ++A  AL       A+N++N +T GFR   V      G    ++       A G      
Sbjct: 6  VSALSALSTVQEVSANNIANMNTDGFRAGAVSLESGPGGQGVEVASITESTAPGAFINGV 65

Query: 69 EVGSFISTGTELDFALEGDAW 89
          E  +       +D  +   A+
Sbjct: 66 ETSNTDVGREMVDMIVTSRAF 86


>gi|83647175|ref|YP_435610.1| flagellar basal body rod protein FlgC [Hahella chejuensis KCTC
           2396]
 gi|83635218|gb|ABC31185.1| flagellar basal-body rod protein FlgC [Hahella chejuensis KCTC
           2396]
          Length = 145

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 20/43 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N + EM  M+  ++ F +   +++  +  M   + 
Sbjct: 100 GYVFYPNVNVVEEMADMMSASRSFQTNVEVLNSAKTMMQRLLT 142



 Score = 39.1 bits (89), Expect = 0.59,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 6/49 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEV 44
           + F+I  +   A   RL+T A N++N DT        +R  K  F+ V
Sbjct: 4  NSIFDIAGSGMTAQSVRLNTTASNLANADTASSSIDQTYRARKPIFAAV 52


>gi|325567534|ref|ZP_08144201.1| flagellar basal-body rod protein FlgB [Enterococcus casseliflavus
           ATCC 12755]
 gi|325158967|gb|EGC71113.1| flagellar basal-body rod protein FlgB [Enterococcus casseliflavus
           ATCC 12755]
          Length = 158

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 10/58 (17%), Positives = 21/58 (36%)

Query: 10  AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLS 67
            A     QR   ++ N++N +T G++  ++ F   +              AS  +   
Sbjct: 48  TAMNVSAQRAELISSNIANVNTDGYKAKRIVFESELKQALASSGTDAVTEASVSQVKP 105


>gi|163781740|ref|ZP_02176740.1| flagellar biosynthesis FlgC [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882960|gb|EDP76464.1| flagellar biosynthesis FlgC [Hydrogenivirga sp. 128-5-R1-1]
          Length = 137

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 7/42 (16%), Positives = 16/42 (38%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N + + EM  MI   + + +     +  +      I
Sbjct: 92  GYVRLPNVDLVKEMADMISAVRSYEANLNAFNLTKDMANRTI 133



 Score = 42.2 bits (97), Expect = 0.057,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 32/85 (37%), Gaps = 5/85 (5%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDT---VG--FRTIKVKFSEVVGAIKNDIDQKIS 57
           +F I  +   A   R++TVA N++N +     G  FR ++V F  +    +    +   
Sbjct: 6  RTFEISASGMYAQRLRMNTVASNLANYEAYKQTGEPFRKLEVVFQAIYNPERVKKGEIPV 65

Query: 58 FVASGKEYLSKEVGSFISTGTELDF 82
           V   +E  +     +       D 
Sbjct: 66 AVTQIRESDAPFKVIYDPDNPRADA 90


>gi|258592553|emb|CBE68862.1| putative Flagellar hook-associated protein 1 (HAP1) [NC10
          bacterium 'Dutch sediment']
          Length = 466

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 24/62 (38%), Gaps = 3/62 (4%)

Query: 1  MQT---SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS 57
          M +   S  +   A  A +  + T   N++N +T GF   +V  +  V      +    +
Sbjct: 1  MISLQASLTMARKALQAQQVAIQTTGHNIANANTPGFTRQRVDLTPAVPFSLGSVGSLGT 60

Query: 58 FV 59
           V
Sbjct: 61 GV 62



 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 4/42 (9%), Positives = 13/42 (30%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            S  +   EM  +I   + + +     +     +   +  + 
Sbjct: 424 ASGVSLDEEMTDLIRFQKAYEAAAHFANVVNDLLGTLMSQLG 465


>gi|52082076|ref|YP_080867.1| flagellar hook-associated protein FlgK [Bacillus licheniformis
          ATCC 14580]
 gi|52787465|ref|YP_093294.1| flagellar hook-associated protein FlgK [Bacillus licheniformis
          ATCC 14580]
 gi|319647943|ref|ZP_08002161.1| FlgK protein [Bacillus sp. BT1B_CT2]
 gi|52005287|gb|AAU25229.1| flagellar hook-associated protein 1 [Bacillus licheniformis ATCC
          14580]
 gi|52349967|gb|AAU42601.1| FlgK [Bacillus licheniformis ATCC 14580]
 gi|317390284|gb|EFV71093.1| FlgK protein [Bacillus sp. BT1B_CT2]
          Length = 507

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 18/40 (45%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
             I      A +  LS  A+N+SN +T G+   +V F  
Sbjct: 8  GLEIAKRGLSAQQSALSVTANNISNANTEGYSRQRVTFKA 47



 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 17/41 (41%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  +   EM  MI     +N+   +I   ++ + + I  + 
Sbjct: 463 SAVSLDEEMSNMIQFQHAYNAAARMITLQDEVLDKIINGMG 503


>gi|170289254|ref|YP_001739492.1| flagellar basal-body rod protein FlgB [Thermotoga sp. RQ2]
 gi|281412856|ref|YP_003346935.1| flagellar basal-body rod protein FlgB [Thermotoga naphthophila
          RKU-10]
 gi|170176757|gb|ACB09809.1| flagellar basal-body rod protein FlgB [Thermotoga sp. RQ2]
 gi|281373959|gb|ADA67521.1| flagellar basal-body rod protein FlgB [Thermotoga naphthophila
          RKU-10]
          Length = 127

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 21/50 (42%), Gaps = 1/50 (2%)

Query: 1  MQTS-FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK 49
          M  S F     A      R +  + N++N  T G++   V F E++   +
Sbjct: 1  MFNSNFYTLKQAMDVALLRQNVHSLNIANVSTPGYKRKYVAFEELLKESE 50


>gi|146307863|ref|YP_001188328.1| flagellar hook-associated protein FlgK [Pseudomonas mendocina
          ymp]
 gi|145576064|gb|ABP85596.1| flagellar hook-associated protein FlgK [Pseudomonas mendocina
          ymp]
          Length = 681

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 19/52 (36%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M    NIGL+   A +  L+    N+ N +T GF   +   +          
Sbjct: 1  MADLLNIGLSGLSASKTSLAVTGHNIVNVNTPGFSRQEAVQTTRTPQFSGAG 52


>gi|160880851|ref|YP_001559819.1| flagellar basal-body rod protein FlgC [Clostridium phytofermentans
           ISDg]
 gi|160429517|gb|ABX43080.1| flagellar basal-body rod protein FlgC [Clostridium phytofermentans
           ISDg]
          Length = 150

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 23/44 (52%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           + G++   N N++ EM  +I  T+ + +  T  +  +  +L+ +
Sbjct: 103 QDGYVTMPNVNTVTEMTNLISATRSYEANVTAFNATKNMLLKGL 146



 Score = 49.1 bits (115), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 6/47 (12%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43
             NI  +   A   R+  ++ N++N +T     G  +R   V FSE
Sbjct: 5  NGMNISASGMSAQRLRMDIISQNIANVETTRDENGNPYRRKTVVFSE 51


>gi|303240172|ref|ZP_07326692.1| flagellar hook-associated protein FlgK [Acetivibrio
          cellulolyticus CD2]
 gi|302592263|gb|EFL61991.1| flagellar hook-associated protein FlgK [Acetivibrio
          cellulolyticus CD2]
          Length = 689

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 20/47 (42%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50
          SF I  +     E+ LS    N++N +T G+   +   S      +N
Sbjct: 7  SFEIARSGMTVNERALSVTGHNIANVNTAGYVRQQAIISSGPMQNEN 53



 Score = 39.9 bits (91), Expect = 0.30,   Method: Composition-based stats.
 Identities = 5/39 (12%), Positives = 15/39 (38%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            +   EM  M+     +++ +  I   ++ +   I  + 
Sbjct: 647 VSMDEEMSNMMKYKFAYSASSRAISIVDEMLDTIISRMG 685


>gi|319427083|gb|ADV55157.1| flagellar hook-associated protein FlgK [Shewanella putrefaciens
          200]
          Length = 641

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 27/80 (33%), Gaps = 1/80 (1%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA-IKNDIDQKISFVA 60
              NI     LA + +L   ++N++N +T G+       S +      N      ++V 
Sbjct: 3  IDLLNIARTGVLASQSQLGVTSNNIANANTAGYHRQVATQSTLESQRFGNSFYGTGTYVD 62

Query: 61 SGKEYLSKEVGSFISTGTEL 80
            K   +      +  G   
Sbjct: 63 DVKRIYNDYAARELRIGQTT 82



 Score = 38.3 bits (87), Expect = 0.82,   Method: Composition-based stats.
 Identities = 4/41 (9%), Positives = 15/41 (36%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E   ++   Q + +   ++   ++     + ++ 
Sbjct: 601 SGVNLDEEAANLMRFQQAYQASARIMTTAQQIFDTLLTSVR 641


>gi|89075493|ref|ZP_01161904.1| Putative flagellar basal body rod protein FlgC [Photobacterium sp.
           SKA34]
 gi|89048765|gb|EAR54336.1| Putative flagellar basal body rod protein FlgC [Photobacterium sp.
           SKA34]
          Length = 138

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 24/43 (55%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           GF+   N N M EM  MI  ++ + +   + D +++ +++ ++
Sbjct: 93  GFIYKPNVNVMEEMANMISASRSYQNNVQVADASKQMLMKTLQ 135


>gi|224373713|ref|YP_002608085.1| flagellar basal body rod protein FlgC [Nautilia profundicola AmH]
 gi|223589296|gb|ACM93032.1| flagellar basal-body rod protein FlgC [Nautilia profundicola AmH]
          Length = 165

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 19/47 (40%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           G++   N N + EM  ++  T+ + +        +     AI  + S
Sbjct: 119 GYVAYPNINPVIEMADLLEATRAYQANVAAFQSAKTMANSAINILQS 165



 Score = 41.8 bits (96), Expect = 0.088,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 6/48 (12%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44
           SF+I      A   R++ +++N++N +T     G  +R  +V F  V
Sbjct: 5  NSFDISGYGLSAQRFRINIISENIANANTTRTDEGGPYRRKEVIFKAV 52


>gi|78047580|ref|YP_363755.1| flagellar hook-associated protein FlgK [Xanthomonas campestris
          pv. vesicatoria str. 85-10]
 gi|325927969|ref|ZP_08189190.1| flagellar hook-associated protein FlgK [Xanthomonas perforans
          91-118]
 gi|78036010|emb|CAJ23701.1| flagellar hook-associated protein 1 (HAP1) [Xanthomonas
          campestris pv. vesicatoria str. 85-10]
 gi|325541654|gb|EGD13175.1| flagellar hook-associated protein FlgK [Xanthomonas perforans
          91-118]
          Length = 624

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 27/42 (64%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
           +  + G +A +A ++ LSTV+ N++N +T G+   +V+F+ 
Sbjct: 1  MSIMSTGTSALIAFQRALSTVSHNVANINTEGYSRQRVEFAT 42


>gi|146293684|ref|YP_001184108.1| flagellar hook-associated protein FlgK [Shewanella putrefaciens
          CN-32]
 gi|145565374|gb|ABP76309.1| flagellar hook-associated protein FlgK [Shewanella putrefaciens
          CN-32]
          Length = 641

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 27/80 (33%), Gaps = 1/80 (1%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA-IKNDIDQKISFVA 60
              NI     LA + +L   ++N++N +T G+       S +      N      ++V 
Sbjct: 3  IDLLNIARTGVLASQSQLGVTSNNIANANTAGYHRQVATQSTLESQRFGNSFYGTGTYVD 62

Query: 61 SGKEYLSKEVGSFISTGTEL 80
            K   +      +  G   
Sbjct: 63 DVKRIYNDYAARELRIGQTT 82



 Score = 38.3 bits (87), Expect = 0.84,   Method: Composition-based stats.
 Identities = 4/41 (9%), Positives = 15/41 (36%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E   ++   Q + +   ++   ++     + ++ 
Sbjct: 601 SGVNLDEEAANLMRFQQAYQASARIMTTAQQIFDTLLTSVR 641


>gi|254502506|ref|ZP_05114657.1| flagellar basal-body rod protein FlgC [Labrenzia alexandrii DFL-11]
 gi|222438577|gb|EEE45256.1| flagellar basal-body rod protein FlgC [Labrenzia alexandrii DFL-11]
          Length = 136

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/116 (13%), Positives = 35/116 (30%), Gaps = 11/116 (9%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSE----VVGAIKN 50
             S  I  +   A   R+  +A+N++N ++         +R     F       +GA K 
Sbjct: 4   MKSLFISASGLKAQNGRMRVIAENIANANSTARTPDEEPYRRKIPTFQSEFDKQLGADKV 63

Query: 51  DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106
           ++ + +   ++ K        +    G  L   +      A           +   
Sbjct: 64  ELGRIVEDKSAFKSTHMPGHPAADENGYVLQPNVSTLVESADMREAQRSYEANLNV 119



 Score = 46.0 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 7/47 (14%), Positives = 20/47 (42%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           G++   N +++ E   M    + + +   +I+   K +   I  + +
Sbjct: 90  GYVLQPNVSTLVESADMREAQRSYEANLNVIETTRKMLQRTIDILRA 136


>gi|253702510|ref|YP_003023699.1| flagellar basal-body rod protein FlgC [Geobacter sp. M21]
 gi|251777360|gb|ACT19941.1| flagellar basal-body rod protein FlgC [Geobacter sp. M21]
          Length = 145

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 20/42 (47%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N N + EM  MI  ++ + +  T    ++   L+ +
Sbjct: 100 GYVAYPNINVVEEMADMITASRSYEANITATQASKSMALKTL 141



 Score = 40.6 bits (93), Expect = 0.20,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 29/82 (35%), Gaps = 8/82 (9%)

Query: 1  MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDI 52
          M   TS +I   A  A   R++ ++ N++N ++     G  +R     F+          
Sbjct: 1  MDFFTSMDISATALAAERTRMNLISSNLANVNSTRTAEGGPYRRKDAVFTATPLKEGASF 60

Query: 53 DQKISFVASGKEYLSKEVGSFI 74
             +S  A  +     ++    
Sbjct: 61 GAALSKAAGARSVQVTQINEDQ 82


>gi|59712483|ref|YP_205259.1| flagellar basal body rod protein FlgC [Vibrio fischeri ES114]
 gi|197336337|ref|YP_002156702.1| flagellar basal-body rod protein FlgC [Vibrio fischeri MJ11]
 gi|24459275|gb|AAL86628.1| FlgC [Vibrio fischeri ES114]
 gi|59480584|gb|AAW86371.1| flagellar proximal rod protein FlgC [Vibrio fischeri ES114]
 gi|197317827|gb|ACH67274.1| flagellar basal-body rod protein FlgC [Vibrio fischeri MJ11]
          Length = 138

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 22/43 (51%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N M EM  MI  ++ + +   + D +++ +   +R
Sbjct: 93  GYIFKPNVNVMEEMANMISASRSYQTNVQVADASKQMLQSTLR 135


>gi|311694359|gb|ADP97232.1| flagellar basal-body rod protein FlgC-like protein [marine
           bacterium HP15]
          Length = 149

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 19/43 (44%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N + EM  M+  ++ F     +++  +  M   + 
Sbjct: 103 GYVFYPNVNVVEEMADMMSSSRSFQMNVDVMNTAKSMMQRILT 145



 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 35/92 (38%), Gaps = 6/92 (6%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDT----VG--FRTIKVKFSEVVGAIKNDIDQKI 56
          + F+I  +   A   RL+T A N++N +T     G  +R  K  FS +  ++ N     +
Sbjct: 5  SIFDIAGSGMTAQSLRLNTTASNIANAETASSSTGETYRARKPVFSAIQQSLMNPGQGGL 64

Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDA 88
             A         V   + +  EL    E   
Sbjct: 65 PMAADEGPGAGVRVDGIVESDAELQMRYEPHH 96


>gi|225851146|ref|YP_002731380.1| flagellar hook-associated protein FlgK [Persephonella marina EX-H1]
 gi|225645441|gb|ACO03627.1| flagellar hook-associated protein FlgK [Persephonella marina EX-H1]
          Length = 485

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 8/46 (17%), Positives = 20/46 (43%)

Query: 193 TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           TV     E S+ N   E+  +  L + + +   +I+  ++ +   +
Sbjct: 436 TVDSKMKEISSVNLDEELINLTKLQRAYEASAKIINVTDELLQTLL 481


>gi|126738582|ref|ZP_01754287.1| flagellar basal-body rod protein FlgC [Roseobacter sp. SK209-2-6]
 gi|126720381|gb|EBA17087.1| flagellar basal-body rod protein FlgC [Roseobacter sp. SK209-2-6]
          Length = 130

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 37/91 (40%), Gaps = 10/91 (10%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS- 61
           S N+  +   A  +RL  V++N+SN DT G+R   V F   V  ++ND ++  +   + 
Sbjct: 6  NSLNVTASGLKAQAKRLRHVSENISNADTPGYRRKTVPFLA-VRELQNDAEKVETGRVTL 64

Query: 62 --------GKEYLSKEVGSFISTGTELDFAL 84
                            +    G+ +D  +
Sbjct: 65 DRTELTNIYDPTHPMADDTGHYEGSNVDLMI 95



 Score = 40.2 bits (92), Expect = 0.24,   Method: Composition-based stats.
 Identities = 6/37 (16%), Positives = 15/37 (40%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           G  E SN + M E+       + +++   + ++    
Sbjct: 84  GHYEGSNVDLMIEIADAREAQRSYDANLKMFEQTRSM 120


>gi|312126816|ref|YP_003991690.1| flagellar basal-body rod protein flgb [Caldicellulosiruptor
          hydrothermalis 108]
 gi|311776835|gb|ADQ06321.1| flagellar basal-body rod protein FlgB [Caldicellulosiruptor
          hydrothermalis 108]
          Length = 132

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 9/57 (15%), Positives = 22/57 (38%)

Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSF 73
          +R   +++N++N DT G++   + F   +    N  +    F  + +          
Sbjct: 20 KRNEIISNNIANADTPGYKAKDLNFEAYLQRSLNQEEGLQLFTTNERHIKESSSPDN 76


>gi|319790356|ref|YP_004151989.1| flagellar hook-associated protein FlgK [Thermovibrio ammonificans
           HB-1]
 gi|317114858|gb|ADU97348.1| flagellar hook-associated protein FlgK [Thermovibrio ammonificans
           HB-1]
          Length = 449

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 5/46 (10%), Positives = 19/46 (41%)

Query: 194 VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +K+   E S  N+  E+  +    + + +   ++   ++ +   + 
Sbjct: 401 IKQKVEELSGVNTDEELVNLTRYQRAYQAAARVVTVTDELLQTILN 446



 Score = 39.9 bits (91), Expect = 0.34,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 24/47 (51%), Gaps = 4/47 (8%)

Query: 4  SFNIGLA----AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46
          +    L+    A L+ +  ++T   N+SN +T G+   +  F+++ G
Sbjct: 2  ALFGALSLASQALLSQQIAVNTTNRNLSNVNTDGYSREEPVFADIPG 48


>gi|24217008|ref|NP_714489.1| flagellar hook-associated protein FlgK [Leptospira interrogans
           serovar Lai str. 56601]
 gi|24198413|gb|AAN51507.1| flagellar hook-associated protein FlgK [Leptospira interrogans
           serovar Lai str. 56601]
          Length = 636

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 7/39 (17%), Positives = 15/39 (38%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            N   EM  M+     +N+   +I+   + +   I  + 
Sbjct: 597 VNLDEEMANMVQFQHAYNASAKMINTMNEILDTIINRLG 635



 Score = 36.0 bits (81), Expect = 4.5,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 31/99 (31%), Gaps = 9/99 (9%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV---------VGAIKNDID 53
           +   IG     A +Q L T   N+SN D   +   +V  + +            +   I 
Sbjct: 6   SGLEIGKRGLTAHQQALQTTGHNISNADNKHYARQRVTMTAMDPLYDPSLNRANLPGQIG 65

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL 92
           Q +   +  +   +      I T    D+    + +   
Sbjct: 66  QGVEIASIERIRDNFIDDRIIETSGNKDYWAARNEYLYQ 104


>gi|327398477|ref|YP_004339346.1| flagellar hook-associated protein FlgK [Hippea maritima DSM 10411]
 gi|327181106|gb|AEA33287.1| flagellar hook-associated protein FlgK [Hippea maritima DSM 10411]
          Length = 580

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/210 (10%), Positives = 52/210 (24%), Gaps = 13/210 (6%)

Query: 44  VVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103
           V     N+ D   +   S +  L +   + +    ++  +  G              T D
Sbjct: 373 VFTIPVNEDDHLQAQDPSDEHSLIERFNNIMQGYAQMSISPAGKVQIKAIGNYKFAFTYD 432

Query: 104 GRFKVTDDG-SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162
               +   G +          +D+  +    P K         G+ S    +        
Sbjct: 433 SSNLLAATGINTFFTGHNSSDIDVNRIVQNDPSKIAAGKTLNPGDSSNAQTIAQVQLNKV 492

Query: 163 VDMSQGFVRRENSGISPNIPPTPLEDLSGVTVK----------RGFLEDSNANSMYEMGQ 212
           +  +   +    +    +I  T          K          +  LE    +   E   
Sbjct: 493 MVNNTQTIDEYYNAFLGSIGSTKQRFDEIYKAKEAVYQQLKTTQQSLEG--VSLDEEAAN 550

Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           +I   + + +    I   +      I  + 
Sbjct: 551 LIKFQRAYQANAKFISVVDDMTQTLINMVR 580



 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 9/37 (24%), Positives = 21/37 (56%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
          + NIG++     +  ++T  +N++N +T G+   +V 
Sbjct: 7  ALNIGVSGIFVNKAAINTTGNNVANVNTPGYSRERVD 43


>gi|221635454|ref|YP_002523330.1| flagellar hook-associated protein FlgK [Thermomicrobium roseum
          DSM 5159]
 gi|221158038|gb|ACM07156.1| flagellar hook-associated protein FlgK [Thermomicrobium roseum
          DSM 5159]
          Length = 468

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 17/38 (44%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
           +        +A ++ + T   N++N +T GF   +V 
Sbjct: 4  RALETAFRGLMAQQRVVDTANHNIANANTPGFARQRVS 41



 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 6/39 (15%), Positives = 14/39 (35%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            +   EM  +I   Q + +    I   ++ +   I  + 
Sbjct: 426 VSLDEEMANLIKYQQAYGAAARAITAVDEMLDRIINGMG 464


>gi|167038179|ref|YP_001665757.1| flagellar hook-associated protein FlgK [Thermoanaerobacter
          pseudethanolicus ATCC 33223]
 gi|167039112|ref|YP_001662097.1| flagellar hook-associated protein FlgK [Thermoanaerobacter sp.
          X514]
 gi|300913298|ref|ZP_07130615.1| flagellar hook-associated protein FlgK [Thermoanaerobacter sp.
          X561]
 gi|307723688|ref|YP_003903439.1| flagellar hook-associated protein FlgK [Thermoanaerobacter sp.
          X513]
 gi|320116588|ref|YP_004186747.1| flagellar hook-associated protein FlgK [Thermoanaerobacter
          brockii subsp. finnii Ako-1]
 gi|166853352|gb|ABY91761.1| flagellar hook-associated protein FlgK [Thermoanaerobacter sp.
          X514]
 gi|166857013|gb|ABY95421.1| flagellar hook-associated protein FlgK [Thermoanaerobacter
          pseudethanolicus ATCC 33223]
 gi|300889983|gb|EFK85128.1| flagellar hook-associated protein FlgK [Thermoanaerobacter sp.
          X561]
 gi|307580749|gb|ADN54148.1| flagellar hook-associated protein FlgK [Thermoanaerobacter sp.
          X513]
 gi|319929679|gb|ADV80364.1| flagellar hook-associated protein FlgK [Thermoanaerobacter
          brockii subsp. finnii Ako-1]
          Length = 480

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 7/54 (12%), Positives = 17/54 (31%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56
              I        ++ L     N++N +T G+    V  + +       +  + 
Sbjct: 5  QGLEIAKTGLFVSQKALDVTGHNIANANTPGYTRQVVDMASIAPPTTFGMYDQW 58



 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 6/41 (14%), Positives = 16/41 (39%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  +   EM  M+   + + +   +I   ++ +   I  + 
Sbjct: 436 SGVSLDEEMTNMLKYQKSYAASARVITAIDELLDTLINRMG 476


>gi|307823529|ref|ZP_07653758.1| flagellar basal-body rod protein FlgC [Methylobacter tundripaludum
           SV96]
 gi|307735514|gb|EFO06362.1| flagellar basal-body rod protein FlgC [Methylobacter tundripaludum
           SV96]
          Length = 138

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 49/119 (41%), Gaps = 6/119 (5%)

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                ++++         +++   +    ++  KVI      S     G V  +++ +  
Sbjct: 22  NLVASNISNANSVSSSAADVYKSRQPVFAAELDKVINKQNATSKVNVLGVVEGQDAPVME 81

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
             P  P+ +        G++  SN N++ EM  M+  ++ + +   +++  ++ ML+ +
Sbjct: 82  YAPNHPMANSD------GYIFKSNVNTVEEMANMMSASRSYQNNVDVLNTAKQMMLQTL 134


>gi|301168115|emb|CBW27701.1| flagellar basal-body rod protein [Bacteriovorax marinus SJ]
          Length = 146

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 22/43 (51%)

Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           +G++   + N M EM  MI  ++ + +    ++  +   ++A+
Sbjct: 99  QGYVAYPDINVMEEMANMISASRAYEANINAMNTTKNMAMKAL 141



 Score = 39.5 bits (90), Expect = 0.48,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 8/51 (15%)

Query: 1  MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43
          M   TS  I  +   A ++R+++++ N++N  T     G  +R  +V F  
Sbjct: 1  MDLLTSLKISSSGLAANKKRMASISSNIANAQTTRTAEGGPYRRKEVVFGS 51


>gi|288573035|ref|ZP_06391392.1| flagellar basal-body rod protein FlgC [Dethiosulfovibrio
           peptidovorans DSM 11002]
 gi|288568776|gb|EFC90333.1| flagellar basal-body rod protein FlgC [Dethiosulfovibrio
           peptidovorans DSM 11002]
          Length = 140

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 6/55 (10%), Positives = 19/55 (34%)

Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
              P    +       + G++   N + + EM  M+  ++ + +   +    +  
Sbjct: 76  TTAPRLVYQPDHPDADQEGYVAMPNVSVVREMADMMVASRAYEANLAVTTSAKSM 130



 Score = 43.3 bits (100), Expect = 0.033,   Method: Composition-based stats.
 Identities = 13/109 (11%), Positives = 32/109 (29%), Gaps = 12/109 (11%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTD---TV-G--FRTIKVKFSEVVGAIKNDIDQKI 56
            S ++  ++  A    + T++ N++N +   T  G  +      F +++  I  D   K 
Sbjct: 5   KSIDVAASSLTAHRLWMDTISQNLANVNSSRTPEGGPYVRRVPVFQQILDEIGEDGKVKG 64

Query: 57  SFVA------SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
                     +                 E   A+   +     +   + 
Sbjct: 65  GVKVVEIAKDTTTAPRLVYQPDHPDADQEGYVAMPNVSVVREMADMMVA 113


>gi|148980296|ref|ZP_01815983.1| putative flagellar hook-associated protein [Vibrionales bacterium
           SWAT-3]
 gi|145961315|gb|EDK26625.1| putative flagellar hook-associated protein [Vibrionales bacterium
           SWAT-3]
          Length = 459

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 33/95 (34%)

Query: 6   NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65
           NIGL+  LA    L+T A N +N +T G+    V     +     +     + V      
Sbjct: 5   NIGLSGALANRVALNTTAQNTANVNTPGYSRQIVTMEASLSGNAVNGINLGAGVEVSDIL 64

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALESPRGIIL 100
              +  S        + A    ++F   S    +L
Sbjct: 65  RIADQSSINRLREATESAQYSQSYFNGLSNLENLL 99



 Score = 37.2 bits (84), Expect = 2.2,   Method: Composition-based stats.
 Identities = 7/38 (18%), Positives = 13/38 (34%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           S  NS  E   M+     + +   +I    +     +R
Sbjct: 420 SAVNSDEEAANMLLYLNAYEANMKIISTANQMFQTLLR 457


>gi|294665573|ref|ZP_06730854.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str.
          ICPB 10535]
 gi|292604671|gb|EFF48041.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str.
          ICPB 10535]
          Length = 624

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 27/42 (64%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
           +  + G +A +A ++ LSTV+ N++N +T G+   +V+F+ 
Sbjct: 1  MSIMSTGTSALIAFQRALSTVSHNVANINTEGYSRQRVEFAT 42


>gi|268589172|gb|ACZ06862.1| flagella hook-associated protein [Xanthomonas axonopodis pv.
          glycines]
          Length = 624

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 27/42 (64%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
           +  + G +A +A ++ LSTV+ N++N +T G+   +V+F+ 
Sbjct: 1  MSIMSTGTSALIAFQRALSTVSHNVANINTEGYSRQRVEFAT 42


>gi|294624307|ref|ZP_06703010.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str.
          ICPB 11122]
 gi|292601389|gb|EFF45423.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str.
          ICPB 11122]
          Length = 624

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 27/42 (64%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
           +  + G +A +A ++ LSTV+ N++N +T G+   +V+F+ 
Sbjct: 1  MSIMSTGTSALIAFQRALSTVSHNVANINTEGYSRQRVEFAT 42


>gi|21242721|ref|NP_642303.1| flagellar hook-associated protein FlgK [Xanthomonas axonopodis
          pv. citri str. 306]
 gi|21108196|gb|AAM36839.1| flagellar protein [Xanthomonas axonopodis pv. citri str. 306]
          Length = 624

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 27/42 (64%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
           +  + G +A +A ++ LSTV+ N++N +T G+   +V+F+ 
Sbjct: 1  MSIMSTGTSALIAFQRALSTVSHNVANINTEGYSRQRVEFAT 42


>gi|154250381|ref|YP_001411206.1| flagellar basal-body rod protein FlgB [Fervidobacterium nodosum
          Rt17-B1]
 gi|154154317|gb|ABS61549.1| flagellar basal-body rod protein FlgB [Fervidobacterium nodosum
          Rt17-B1]
          Length = 131

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 20/54 (37%), Gaps = 5/54 (9%)

Query: 1  MQTSFNIG-----LAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK 49
          M  S           A     +R    A N++N +T G++   + F E +   K
Sbjct: 1  MDNSIFNSNFDTLKTALDVQMKRQEIHAQNIANAETPGYKRKYIAFEEYLQESK 54


>gi|304317611|ref|YP_003852756.1| flagellar hook-associated protein FlgK [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302779113|gb|ADL69672.1| flagellar hook-associated protein FlgK [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 478

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 6/41 (14%), Positives = 16/41 (39%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  +   EM  M+   + + +   +I   ++ +   I  + 
Sbjct: 436 SGVSLDEEMTNMLKYQKSYEASARMITVMDELLDTLINKMG 476



 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 19/54 (35%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56
              I      A +Q L+    N+SN +T G+    +  S +       +  + 
Sbjct: 5  QGLEIAKTGLFASQQALNLTGHNISNANTPGYTRQVIDLSAIAPPTTYGMADQW 58


>gi|255597140|ref|XP_002536705.1| Flagellar hook-associated protein, putative [Ricinus communis]
 gi|223518821|gb|EEF25678.1| Flagellar hook-associated protein, putative [Ricinus communis]
          Length = 439

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/74 (18%), Positives = 28/74 (37%), Gaps = 4/74 (5%)

Query: 6  NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65
             L+  LA +  L+TV+ N++N  T G+    V    ++ A  +D     +        
Sbjct: 5  YNALSGALAAQAALNTVSQNLANVQTPGYTRQGV----LLQATASDPGTLSAGNGVKIGS 60

Query: 66 LSKEVGSFISTGTE 79
          L +   ++      
Sbjct: 61 LLRFSNTYQLQQMW 74


>gi|157959904|ref|YP_001499938.1| flagellar basal-body rod protein FlgC [Shewanella pealeana ATCC
           700345]
 gi|157844904|gb|ABV85403.1| flagellar basal-body rod protein FlgC [Shewanella pealeana ATCC
           700345]
          Length = 139

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 27/48 (56%), Gaps = 1/48 (2%)

Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           +G++  SN N++ EM  M+  ++ F +   +++   +SM + +  + +
Sbjct: 92  QGYVAYSNVNTVEEMADMMAASRSFETSVEVMNRA-RSMQQGLLQLGT 138



 Score = 36.0 bits (81), Expect = 4.1,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 6/51 (11%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKND 51
          I  A   A   RL+TVA N++N           FR +K  FS +    +  
Sbjct: 9  IAGAGMNAQTIRLNTVASNLANAGAAAESPDQAFRALKPVFSTIYKQTQEG 59


>gi|327480026|gb|AEA83336.1| flagellar hook-associated protein FlgK [Pseudomonas stutzeri DSM
          4166]
          Length = 685

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 20/52 (38%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M    +IGL+   A + +LS    N++N +T G+       +          
Sbjct: 1  MADLLSIGLSGLAASKTQLSITGHNITNVNTPGYSRQDATQATRSPQFSGAG 52


>gi|256750927|ref|ZP_05491811.1| flagellar hook-associated protein FlgK [Thermoanaerobacter
          ethanolicus CCSD1]
 gi|256750262|gb|EEU63282.1| flagellar hook-associated protein FlgK [Thermoanaerobacter
          ethanolicus CCSD1]
          Length = 480

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 7/54 (12%), Positives = 17/54 (31%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56
              I        ++ L     N++N +T G+    V  + +       +  + 
Sbjct: 5  QGLEIAKTGLFVSQKALDVTGHNIANANTPGYTRQVVDMASIAPPTTFGMYDQW 58



 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 6/41 (14%), Positives = 16/41 (39%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  +   EM  M+   + + +   +I   ++ +   I  + 
Sbjct: 436 SGVSLDEEMTNMLKYQKSYAASARVITAIDELLDTLINRMG 476


>gi|313905141|ref|ZP_07838510.1| flagellar basal-body rod protein FlgC [Eubacterium cellulosolvens
           6]
 gi|313470044|gb|EFR65377.1| flagellar basal-body rod protein FlgC [Eubacterium cellulosolvens
           6]
          Length = 151

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 18/41 (43%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
           G++E  N +   E    +  T+ + +  T ++  +    +A
Sbjct: 106 GYVEMPNVDVTKETVDAMSATRSYEANVTALNAIKMMTQKA 146



 Score = 42.9 bits (99), Expect = 0.034,   Method: Composition-based stats.
 Identities = 11/29 (37%), Positives = 16/29 (55%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTV 32
          SF+I  +   A   RL   A+N++N DT 
Sbjct: 6  SFDISASGMSAQRIRLDIAAENIANVDTT 34


>gi|117923582|ref|YP_864199.1| flagellar basal-body rod protein FlgB [Magnetococcus sp. MC-1]
 gi|117607338|gb|ABK42793.1| flagellar basal-body rod protein FlgB [Magnetococcus sp. MC-1]
          Length = 137

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 9/49 (18%), Positives = 21/49 (42%)

Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
          ++R   +A N++N DT G++  ++ F E +              +  + 
Sbjct: 22 QRRQDIIAANIANADTPGYKARRLSFEEELAKSTPRDGDLPMARSDPRH 70


>gi|119477955|ref|ZP_01618055.1| flagellar basal-body rod protein FlgC [marine gamma proteobacterium
           HTCC2143]
 gi|119448868|gb|EAW30110.1| flagellar basal-body rod protein FlgC [marine gamma proteobacterium
           HTCC2143]
          Length = 147

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N + EM  MI  ++ F     L++  ++ M   +R
Sbjct: 102 GYVYYPNVNVVEEMADMISASRSFQVNVELMNSAKQMMQGLLR 144


>gi|296274007|ref|YP_003656638.1| flagellar basal-body rod protein FlgC [Arcobacter nitrofigilis
          DSM 7299]
 gi|296098181|gb|ADG94131.1| flagellar basal-body rod protein FlgC [Arcobacter nitrofigilis
          DSM 7299]
          Length = 153

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 23/48 (47%), Gaps = 6/48 (12%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVV 45
           +NI  +   A   R++ V+ N++N  T     G  ++   V F E++
Sbjct: 6  GYNIASSGMSAQRTRINVVSANIANAKTTHSTDGGPYKKQNVVFQEML 53



 Score = 44.5 bits (103), Expect = 0.015,   Method: Composition-based stats.
 Identities = 7/47 (14%), Positives = 19/47 (40%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           G++   N N + EM  +I   + + +  +     +    + +  + S
Sbjct: 107 GYVAYPNINPVIEMVDLIEAMRSYEANVSAFTTTKTIDTKTLELLRS 153


>gi|209695764|ref|YP_002263694.1| flagellar basal body rod protein FlgC [Aliivibrio salmonicida
           LFI1238]
 gi|208009717|emb|CAQ80021.1| flagellar basal-body rod protein FlgC [Aliivibrio salmonicida
           LFI1238]
          Length = 138

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N M EM  MI  ++ + +   + D  ++ +   +R
Sbjct: 93  GYIFKPNVNVMEEMANMISASRSYQTNVQVADAGKQMLQSTLR 135


>gi|163744319|ref|ZP_02151679.1| flagellar basal body rod protein [Oceanibulbus indolifex HEL-45]
 gi|161381137|gb|EDQ05546.1| flagellar basal body rod protein [Oceanibulbus indolifex HEL-45]
          Length = 136

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/110 (14%), Positives = 38/110 (34%), Gaps = 7/110 (6%)

Query: 7   IGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQKISFV 59
           I  +   A   RL  +++N++N D+ G       FR   + FSE++         ++  +
Sbjct: 10  IAASGMTAQTARLRVISENVANADSTGTTPGADPFRRKTISFSELIDRNGGGSLVEVDRI 69

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109
              +    ++         E  +    +    +E       +R+    + 
Sbjct: 70  GRDQSPFRRDYDPAHPAADETGYVNRPNVDPIIEMANMREASRNYEANMN 119



 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 12/119 (10%), Positives = 33/119 (27%)

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                      I     +        G    + K I+   L   +     V  +  G   
Sbjct: 14  GMTAQTARLRVISENVANADSTGTTPGADPFRRKTISFSELIDRNGGGSLVEVDRIGRDQ 73

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           +      +       + G++   N + + EM  M   ++ + +   + +   +   + +
Sbjct: 74  SPFRRDYDPAHPAADETGYVNRPNVDPIIEMANMREASRNYEANMNMFESGRRMRSQML 132


>gi|323163759|gb|EFZ49578.1| flagellar basal-body rod protein flgF domain protein [Escherichia
          coli E128010]
          Length = 77

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 16/44 (36%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44
          M  +    + A      + +  A N++N  T GFR        V
Sbjct: 1  MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV 44


>gi|237752647|ref|ZP_04583127.1| biosynthetic arginine decarboxylase [Helicobacter winghamensis ATCC
           BAA-430]
 gi|229376136|gb|EEO26227.1| biosynthetic arginine decarboxylase [Helicobacter winghamensis ATCC
           BAA-430]
          Length = 71

 Score = 49.9 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 18/52 (34%)

Query: 187 EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           +      V++  LE SN +   ++ Q I       +    I   +  +   +
Sbjct: 16  QSGISTNVQQATLETSNVDLTTQIPQQIVAQNGVEANVKSIQTADSMLQTLL 67


>gi|168698713|ref|ZP_02730990.1| flagellar basal-body rod protein FlgB [Gemmata obscuriglobus UQM
           2246]
          Length = 116

 Score = 49.9 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/116 (15%), Positives = 34/116 (29%), Gaps = 7/116 (6%)

Query: 5   FNIGLAAQLALEQRLS-------TVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS 57
            N  L     L Q L         +A N++N +T G++ ++V F   +            
Sbjct: 1   MNTNLPGLSVLTQLLDASGLRHRVIAQNVANVNTPGYKRLEVAFEADLAKALASPTGGTP 60

Query: 58  FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113
                      E     +   + +           ++   II +R G  +    G 
Sbjct: 61  VKPRVVTGDGPERVDGNNVDIDAEMNALAKNALLYQAATQIIASRVGTLRSAISGR 116


>gi|166712056|ref|ZP_02243263.1| flagellar hook-associated protein FlgK [Xanthomonas oryzae pv.
          oryzicola BLS256]
          Length = 624

 Score = 49.9 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 27/42 (64%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
           +  + G +A +A ++ LSTV+ N++N +T G+   +V+F+ 
Sbjct: 1  MSIMSTGTSALIAFQRALSTVSHNVANINTEGYSRQRVEFAT 42


>gi|121535557|ref|ZP_01667365.1| flagellar hook-associated protein FlgK [Thermosinus carboxydivorans
           Nor1]
 gi|121305885|gb|EAX46819.1| flagellar hook-associated protein FlgK [Thermosinus carboxydivorans
           Nor1]
          Length = 494

 Score = 49.9 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 8/36 (22%), Positives = 16/36 (44%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            N   EM  MI   Q +N+   ++   ++ + + I 
Sbjct: 452 VNMDEEMTNMIRYQQGYNAAARVVTAIDEMLDKLIN 487



 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 4/43 (9%)

Query: 2  QTSFNIGLAAQL----ALEQRLSTVADNMSNTDTVGFRTIKVK 40
            S   GL A      A +  L TV  N+SN +T G+      
Sbjct: 1  MRSTFSGLNALTRGIYANQIALDTVGHNISNANTEGYSRQLAS 43


>gi|45659268|ref|YP_003354.1| flagellar hook-associated protein FlgK [Leptospira interrogans
           serovar Copenhageni str. Fiocruz L1-130]
 gi|45602514|gb|AAS71991.1| flagellar hook-associated protein 1 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 636

 Score = 49.9 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 7/39 (17%), Positives = 15/39 (38%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            N   EM  M+     +N+   +I+   + +   I  + 
Sbjct: 597 VNLDEEMANMVQFQHAYNASAKMINTMNEILDTIINRLG 635



 Score = 36.0 bits (81), Expect = 5.2,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 31/99 (31%), Gaps = 9/99 (9%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV---------VGAIKNDID 53
           +   IG     A +Q L T   N+SN D   +   +V  + +            +   I 
Sbjct: 6   SGLEIGKRGLTAHQQALQTTGHNISNADNKHYARQRVTMTAMDPLYDPSLNRANLPGQIG 65

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL 92
           Q +   +  +   +      I T    D+    + +   
Sbjct: 66  QGVEIASIERIRDNFIDDRIIETSGNKDYWAARNEYLYQ 104


>gi|294635619|ref|ZP_06714095.1| flagellar hook-associated protein FlgK [Edwardsiella tarda ATCC
          23685]
 gi|291091002|gb|EFE23563.1| flagellar hook-associated protein FlgK [Edwardsiella tarda ATCC
          23685]
          Length = 552

 Score = 49.9 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 21/43 (48%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
          M    N  ++   A +  L+  ++N+++  T G+    V F+E
Sbjct: 1  MANLINNAMSGLNAAQTALAVTSNNINHVYTAGYNRQSVSFAE 43


>gi|221639489|ref|YP_002525751.1| Flagellar hook-associated protein 1 [Rhodobacter sphaeroides
          KD131]
 gi|221160270|gb|ACM01250.1| Flagellar hook-associated protein 1 [Rhodobacter sphaeroides
          KD131]
          Length = 1363

 Score = 49.9 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 30/79 (37%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           +  +I  +  L+    LS  A+N++N +T G+   +   ++V G   +      S    
Sbjct: 1  MSILDIARSGLLSYRSALSVTAENIANVNTEGYVRREAVLAQVPGGQISPTSAATSGQGV 60

Query: 62 GKEYLSKEVGSFISTGTEL 80
            E + +     ++     
Sbjct: 61 RVEDVRRAFDGLVAQRLRT 79


>gi|77463646|ref|YP_353150.1| FlgK flagellar hook-associated protein 1 [Rhodobacter sphaeroides
          2.4.1]
 gi|77388064|gb|ABA79249.1| FlgK flagellar hook-associated protein 1 [Rhodobacter sphaeroides
          2.4.1]
          Length = 1363

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 30/79 (37%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           +  +I  +  L+    LS  A+N++N +T G+   +   ++V G   +      S    
Sbjct: 1  MSILDIARSGLLSYRSALSVTAENIANVNTEGYVRREAVLAQVPGGQISPTSAATSGQGV 60

Query: 62 GKEYLSKEVGSFISTGTEL 80
            E + +     ++     
Sbjct: 61 RVEDVRRAFDGLVAQRLRT 79


>gi|167750732|ref|ZP_02422859.1| hypothetical protein EUBSIR_01710 [Eubacterium siraeum DSM 15702]
 gi|167656411|gb|EDS00541.1| hypothetical protein EUBSIR_01710 [Eubacterium siraeum DSM 15702]
 gi|291532066|emb|CBK97651.1| flagellar basal-body rod protein FlgC [Eubacterium siraeum 70/3]
          Length = 160

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 6/48 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43
           +S NI  +   A   RL  ++ N++N  T     G  +R   V FSE
Sbjct: 4  LSSLNIAASGMAAERLRLDVISQNVANAKTTRTEDGTPYRRQVVLFSE 51



 Score = 40.2 bits (92), Expect = 0.25,   Method: Composition-based stats.
 Identities = 5/43 (11%), Positives = 16/43 (37%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G+    N +   E    +  T+ + +   +++  +     A+ 
Sbjct: 114 GYYYLPNVDVAEEEMDAMAATRSYEANLAVLNAVKSMAQTALS 156


>gi|118474843|ref|YP_891880.1| flagellar basal body rod protein FlgC [Campylobacter fetus subsp.
           fetus 82-40]
 gi|118414069|gb|ABK82489.1| flagellar basal-body rod protein FlgC [Campylobacter fetus subsp.
           fetus 82-40]
          Length = 164

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 19/45 (42%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           G++   N N + EM  +I  T+ + +  +     +     AI  +
Sbjct: 118 GYIMLPNINPVIEMADLIEATRAYQANVSAFQSAKSIATSAIELL 162



 Score = 46.0 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 19/40 (47%), Gaps = 6/40 (15%)

Query: 11 AQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44
             A   R++ ++ N++N +T     G  +R  +V F  +
Sbjct: 13 GLSAQRFRMNVISSNIANANTTRTAEGGPYRRREVIFKAI 52


>gi|303248256|ref|ZP_07334519.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           fructosovorans JJ]
 gi|302490394|gb|EFL50305.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
           fructosovorans JJ]
          Length = 128

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 18/41 (43%)

Query: 198 FLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            +E SN + + +   MI  ++ F +   +I   ++     +
Sbjct: 84  MVEMSNVDLVRQNVNMIQDSRAFEANVAVIRTADEMAGTLL 124



 Score = 45.6 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 9/57 (15%), Positives = 25/57 (43%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS 57
          M  + +   +A  A+   ++  A+N++N +T G+++   + S         +   + 
Sbjct: 1  MTDAISAAQSALGAMSTSMAVTANNVANVNTDGYKSQDARLSTGPDGQGTQVSSIVE 57


>gi|319405399|emb|CBI79018.1| Flagellar basal-body rod protein flgC [Bartonella sp. AR 15-3]
          Length = 138

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 11/75 (14%), Positives = 27/75 (36%), Gaps = 7/75 (9%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQKISFV 59
          I      A   RL  +A+N++N ++ G       ++   V F  ++    +     ++ +
Sbjct: 11 IATTGLSAQSTRLRVIAENLANVNSTGKSAGARPYQRKTVSFEAILNPYLDAQGVHVTRI 70

Query: 60 ASGKEYLSKEVGSFI 74
          ++ K           
Sbjct: 71 STDKAPFIMRYEPGH 85



 Score = 45.6 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 20/42 (47%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G+++  N NS+ EM  M    + + +   +I +    + + I
Sbjct: 92  GYVKYPNVNSIIEMADMREANRSYEANLQVIRQARDLVSQTI 133


>gi|319650643|ref|ZP_08004783.1| flagellar hook-associated protein K [Bacillus sp. 2_A_57_CT2]
 gi|317397824|gb|EFV78522.1| flagellar hook-associated protein K [Bacillus sp. 2_A_57_CT2]
          Length = 518

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/107 (13%), Positives = 29/107 (27%), Gaps = 1/107 (0%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
                       +  L T   N+SN +T G+   ++ FS+        +++       G 
Sbjct: 7   GLETARRGMFTQQSALYTTGHNISNANTPGYTRQRINFSQTEPYPGAGLNRPQIPGQMGT 66

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTD 110
              +  V        ++ +  E              LT+        
Sbjct: 67  GVEAGSVQRIREGFLDMQYRTESTK-MGYYGAMSESLTKMEEIMNEP 112



 Score = 48.7 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 16/41 (39%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  +   EM  MI     +N+    I   ++ + + I  + 
Sbjct: 474 SAVSLDEEMTNMIKFQHAYNASARNITVVDEMLDKIINGMG 514


>gi|23016627|ref|ZP_00056381.1| COG1558: Flagellar basal body rod protein [Magnetospirillum
           magnetotacticum MS-1]
          Length = 136

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 8/46 (17%), Positives = 19/46 (41%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G++   N N + EM  M    + + +   +I+ +   +   I  + 
Sbjct: 91  GYVLAPNVNPLIEMMDMREAQRSYEANMNVINASRSLLSRTIDMLR 136



 Score = 37.5 bits (85), Expect = 1.6,   Method: Composition-based stats.
 Identities = 16/110 (14%), Positives = 32/110 (29%), Gaps = 11/110 (10%)

Query: 1   MQ---TSFNIGLAAQLALEQRLSTVADNMSN----TDTV-G--FRTIKVKFS-EVVGAIK 49
           M     S  I ++      QRL  +++N++N      T  G  +R   + F  E+  A  
Sbjct: 1   MDELSKSTTIAISGMKVQSQRLRLISENLANSDSLAQTPEGLPYRRKVMTFKNELDRATG 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
             + +     A   E+  +      +   +                    
Sbjct: 61  TSLVKVDKVRADSSEFQRRYDPKHPAADRDGYVLAPNVNPLIEMMDMREA 110


>gi|126730138|ref|ZP_01745950.1| flagellar basal-body rod protein FlgC [Sagittula stellata E-37]
 gi|126709518|gb|EBA08572.1| flagellar basal-body rod protein FlgC [Sagittula stellata E-37]
          Length = 129

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 25/45 (55%), Gaps = 4/45 (8%)

Query: 2  QTSFNIGLA----AQLALEQRLSTVADNMSNTDTVGFRTIKVKFS 42
           ++F+  L+       +   RL  V++N++N DT G+R  ++ F+
Sbjct: 1  MSAFSDALSVTSGGLTSQAARLRVVSENIANVDTPGYRRKQLNFA 45



 Score = 42.2 bits (97), Expect = 0.066,   Method: Composition-based stats.
 Identities = 5/33 (15%), Positives = 13/33 (39%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
            SN + M E+       + + +   + D+  + 
Sbjct: 87  GSNVDLMIELADAREAQRSYEANLKMFDQTRQM 119


>gi|89068701|ref|ZP_01156087.1| flagellar basal body rod protein [Oceanicola granulosus HTCC2516]
 gi|89045664|gb|EAR51726.1| flagellar basal body rod protein [Oceanicola granulosus HTCC2516]
          Length = 131

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 31/94 (32%), Gaps = 1/94 (1%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIKNDIDQKISFVA 60
           + F I       L  R   V++N++N DT G+R   V  F  +V          +S  A
Sbjct: 6  MSFFRIASQRMQWLGTRQQVVSENIANADTPGYRARDVSPFESMVTRSDAGSGPAVSNPA 65

Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALES 94
                              + +L+G+     E 
Sbjct: 66 HITGSGRGAAVDVREDEGTWNVSLDGNTVVLEEQ 99


>gi|222824065|ref|YP_002575639.1| flagellar proximal rod protein FlgC [Campylobacter lari RM2100]
 gi|222539287|gb|ACM64388.1| flagellar proximal rod protein FlgC [Campylobacter lari RM2100]
          Length = 164

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 20/47 (42%)

Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           +G++   N N + EM  +I  T+ + +  +     +     AI  + 
Sbjct: 117 QGYVAFPNINPVIEMADLIEATRAYQANVSAFTSTKTIAQSAIDLLR 163



 Score = 42.2 bits (97), Expect = 0.061,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 18/39 (46%), Gaps = 6/39 (15%)

Query: 11 AQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43
             A   R++ ++ N++N +T     G  +R  +V F  
Sbjct: 13 GLSAQRFRMNVISSNIANANTTRTAEGGPYRRREVIFKA 51


>gi|226939368|ref|YP_002794441.1| FlgK [Laribacter hongkongensis HLHK9]
 gi|226714294|gb|ACO73432.1| FlgK [Laribacter hongkongensis HLHK9]
          Length = 610

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 25/68 (36%), Gaps = 1/68 (1%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           +  NIG+    A    L+T + N+SN +T G+    V  S +            + V  
Sbjct: 1  MSLLNIGVTGLNAARAALTTTSQNVSNVNTAGYHRKAVNQSALYYG-PGQFGNTGNGVRV 59

Query: 62 GKEYLSKE 69
             Y   +
Sbjct: 60 DDIYRVYD 67



 Score = 37.5 bits (85), Expect = 1.5,   Method: Composition-based stats.
 Identities = 5/41 (12%), Positives = 14/41 (34%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E   ++   Q + + + ++          ++ I 
Sbjct: 570 SGVNLDEEAANLLKYQQAYQASSKVVQIAGSLFDSILQAIG 610


>gi|220934400|ref|YP_002513299.1| flagellar hook-associated protein FlgK [Thioalkalivibrio sp.
          HL-EbGR7]
 gi|219995710|gb|ACL72312.1| flagellar hook-associated protein FlgK [Thioalkalivibrio sp.
          HL-EbGR7]
          Length = 637

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 1  MQTS-FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +    IG++  LA ++ L    +N++N+ T G+   ++  S  +     + 
Sbjct: 7  MSSGVLGIGVSGLLAFQRALGVTGNNIANSATEGYSRQRIDLSTQIPQFAGNG 59


>gi|197122865|ref|YP_002134816.1| flagellar basal-body rod protein FlgC [Anaeromyxobacter sp. K]
 gi|196172714|gb|ACG73687.1| flagellar basal-body rod protein FlgC [Anaeromyxobacter sp. K]
          Length = 140

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 7/42 (16%), Positives = 20/42 (47%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           GF+   + N ++E+  ++   + + +  T +D  +     A+
Sbjct: 95  GFVTLPDVNPVHEIVNLMSAQKAYEANATAVDTLKTMAQRAL 136



 Score = 39.9 bits (91), Expect = 0.34,   Method: Composition-based stats.
 Identities = 8/34 (23%), Positives = 17/34 (50%), Gaps = 2/34 (5%)

Query: 1  MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTV 32
          M   ++ N+  +   A   R++  A N++N +T 
Sbjct: 1  MDFLSALNVSASGLAAERVRVNLAASNLANAETT 34


>gi|114562348|ref|YP_749861.1| flagellar hook-associated protein FlgK [Shewanella frigidimarina
           NCIMB 400]
 gi|114333641|gb|ABI71023.1| flagellar hook-associated protein FlgK [Shewanella frigidimarina
           NCIMB 400]
          Length = 642

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 15/126 (11%), Positives = 40/126 (31%), Gaps = 1/126 (0%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
               NI      A + +L   ++N++N +T G+       S +      +         S
Sbjct: 3   IDLLNIARTGVQASQAQLGVTSNNIANANTEGYNRQVATQSSLESQRLGNSFYGTGTYVS 62

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
             + +  E  +      +   +   +  ++  S    I ++ G+    +  +  ++    
Sbjct: 63  DVKRVYNEFAARELRIGQTSMS-AAETSYSKLSELDEIYSQIGKMVPENLNNFFASINSV 121

Query: 122 PVLDMA 127
             L   
Sbjct: 122 ADLPTD 127


>gi|332558502|ref|ZP_08412824.1| FlgK (HAP1) [Rhodobacter sphaeroides WS8N]
 gi|332276214|gb|EGJ21529.1| FlgK (HAP1) [Rhodobacter sphaeroides WS8N]
          Length = 1363

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 30/79 (37%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           +  +I  +  L+    LS  A+N++N +T G+   +   ++V G   +      S    
Sbjct: 1  MSILDIARSGLLSYRSALSVTAENIANVNTEGYVRREAVLAQVPGGQISPTSAATSGQGV 60

Query: 62 GKEYLSKEVGSFISTGTEL 80
            E + +     ++     
Sbjct: 61 RVEDVRRAFDGLVAQRLRT 79


>gi|300716216|ref|YP_003741019.1| cell-proximal portion of basal-body rod [Erwinia billingiae Eb661]
 gi|299062052|emb|CAX59168.1| Cell-proximal portion of basal-body rod [Erwinia billingiae Eb661]
          Length = 134

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 10/92 (10%), Positives = 32/92 (34%)

Query: 148 ISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSM 207
                K +            G VR       P       E  + +   +G+++  N + +
Sbjct: 40  QPYVAKQVVFQTDAVPGSPTGGVRVAQVVDDPTPAKLVYEPGNPMADAKGYVKMPNVDVV 99

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            E    +  ++ + +   +++  ++ M++ + 
Sbjct: 100 GETVNTMSASRSYQANVEVLNTVKQMMMKTLT 131



 Score = 37.5 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 15/105 (14%), Positives = 26/105 (24%), Gaps = 7/105 (6%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS-EVVGAIKNDIDQ 54
              F+I  +A  A  QRL+  A N++N     G     +   +V F  + V        +
Sbjct: 4   LNIFDIAGSAMNAQSQRLNVSASNLANADSVTGPDGQPYVAKQVVFQTDAVPGSPTGGVR 63

Query: 55  KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
               V                   +    +               
Sbjct: 64  VAQVVDDPTPAKLVYEPGNPMADAKGYVKMPNVDVVGETVNTMSA 108


>gi|218887610|ref|YP_002436931.1| flagellar hook-associated protein FlgK [Desulfovibrio vulgaris
          str. 'Miyazaki F']
 gi|218758564|gb|ACL09463.1| flagellar hook-associated protein FlgK [Desulfovibrio vulgaris
          str. 'Miyazaki F']
          Length = 702

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 28/68 (41%), Gaps = 2/68 (2%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV--VGAIKNDIDQKISFVA 60
          +  N+G  + LA +  + T  +N++N +TVG+    V+F E   +      I        
Sbjct: 6  SLLNMGQLSLLANQTAIQTTGNNIANVNTVGYSRQAVRFEEYPALDGFPGQIGTGAYAAE 65

Query: 61 SGKEYLSK 68
            + +   
Sbjct: 66 VYRYFNGF 73



 Score = 42.9 bits (99), Expect = 0.041,   Method: Composition-based stats.
 Identities = 6/38 (15%), Positives = 14/38 (36%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            S  N   EM  ++     + +   L+   ++ M   +
Sbjct: 661 SSGVNLDEEMASLVKFQHAYKAAAKLVTTADQMMQTLL 698


>gi|11136619|gb|AAG31286.1|AF317649_1 flagellar hook-associated protein 1 [Rhodobacter sphaeroides]
          Length = 1363

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 30/79 (37%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           +  +I  +  L+    LS  A+N++N +T G+   +   ++V G   +      S    
Sbjct: 1  MSILDIARSGLLSYRSALSVTAENIANVNTEGYVRREAVLAQVPGGQISPTSAATSGQGV 60

Query: 62 GKEYLSKEVGSFISTGTEL 80
            E + +     ++     
Sbjct: 61 RVEDVRRAFDGLVAQRLRT 79


>gi|332533169|ref|ZP_08409038.1| flagellar hook-associated protein FlgK [Pseudoalteromonas
          haloplanktis ANT/505]
 gi|332037451|gb|EGI73905.1| flagellar hook-associated protein FlgK [Pseudoalteromonas
          haloplanktis ANT/505]
          Length = 667

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 36/94 (38%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
             NI  +   A  + L T + N++N +T G+   + +F+ +V       +         
Sbjct: 4  NLLNIASSGVRASSELLQTTSKNIANVNTEGYVRERTEFTTMVDNQVGRGETYRLLNEFA 63

Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESPR 96
          +  L+++  +       +  A   D  F+ ES  
Sbjct: 64 QSQLNRDTSNKSFFDQFITEANRVDTIFSEESNN 97


>gi|167644972|ref|YP_001682635.1| flagellar hook-associated protein FlgK [Caulobacter sp. K31]
 gi|167347402|gb|ABZ70137.1| flagellar hook-associated protein FlgK [Caulobacter sp. K31]
          Length = 704

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 22/46 (47%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50
           N+  +  +A +  L  V+DN++N +T G+    +  S +V     
Sbjct: 7  LNVATSGMMAAQTGLRVVSDNIANINTAGYVRKTIAQSNLVSNGMG 52



 Score = 38.3 bits (87), Expect = 0.85,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 11/36 (30%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            N   E+  +    Q FN+   LI   +        
Sbjct: 667 VNLDEELVNLTTYQQAFNASARLIQATKDMFDVLTN 702


>gi|126462478|ref|YP_001043592.1| flagellar hook-associated protein FlgK [Rhodobacter sphaeroides
          ATCC 17029]
 gi|126104142|gb|ABN76820.1| flagellar hook-associated protein FlgK [Rhodobacter sphaeroides
          ATCC 17029]
          Length = 1363

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 30/79 (37%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           +  +I  +  L+    LS  A+N++N +T G+   +   ++V G   +      S    
Sbjct: 1  MSILDIARSGLLSYRSALSVTAENIANVNTEGYVRREAVLAQVPGGQISPTSAATSGQGV 60

Query: 62 GKEYLSKEVGSFISTGTEL 80
            E + +     ++     
Sbjct: 61 RVEDVRRAFDGLVAQRLRT 79


>gi|209963543|ref|YP_002296458.1| flagellar basal-body rod protein FlgC, putative [Rhodospirillum
           centenum SW]
 gi|209957009|gb|ACI97645.1| flagellar basal-body rod protein FlgC, putative [Rhodospirillum
           centenum SW]
          Length = 137

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 35/110 (31%), Gaps = 11/110 (10%)

Query: 1   MQ---TSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVV-GAIK 49
           M    +SF I  +   A   RL  VA+NM+N  + G       +R   + F  V+  A++
Sbjct: 1   MDPLASSFGIAASGMKAQATRLRVVAENMANASSTGETPGADPYRRKTIVFDSVLDRALR 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
            D  +  +      ++         +   +    L               
Sbjct: 61  ADTVRVKTIGRDSSDFRLSYEPGHPAADAKGYVKLPNVNTLVEMMDMREA 110



 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 7/46 (15%), Positives = 20/46 (43%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G+++  N N++ EM  M    + + +   ++ +    +   I  + 
Sbjct: 91  GYVKLPNVNTLVEMMDMREAGRSYEANLNVLQQARGMLGRTIDMLR 136


>gi|116252321|ref|YP_768159.1| hypothetical protein RL2575 [Rhizobium leguminosarum bv. viciae
          3841]
 gi|115256969|emb|CAK08063.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
          viciae 3841]
          Length = 101

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 20/38 (52%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44
            L+   A   R+S +A+N++N+ T G+  +    + V
Sbjct: 9  TALSGMRAQTTRVSAIANNIANSSTPGYARLNTSLTSV 46


>gi|86157822|ref|YP_464607.1| flagellar basal-body rod protein FlgC [Anaeromyxobacter
           dehalogenans 2CP-C]
 gi|220917656|ref|YP_002492960.1| flagellar basal-body rod protein FlgC [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|85774333|gb|ABC81170.1| flagellar basal-body rod protein FlgC [Anaeromyxobacter
           dehalogenans 2CP-C]
 gi|219955510|gb|ACL65894.1| flagellar basal-body rod protein FlgC [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 140

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 7/42 (16%), Positives = 20/42 (47%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           GF+   + N ++E+  ++   + + +  T +D  +     A+
Sbjct: 95  GFVTLPDVNPVHEIVNLMSAQKAYEANATAVDTLKTMAQRAL 136



 Score = 39.9 bits (91), Expect = 0.34,   Method: Composition-based stats.
 Identities = 8/34 (23%), Positives = 17/34 (50%), Gaps = 2/34 (5%)

Query: 1  MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTV 32
          M   ++ N+  +   A   R++  A N++N +T 
Sbjct: 1  MDFLSALNVSASGLAAERVRVNLAASNLANAETT 34


>gi|125972983|ref|YP_001036893.1| flagellar basal-body rod protein FlgB [Clostridium thermocellum
          ATCC 27405]
 gi|125713208|gb|ABN51700.1| flagellar basal-body rod protein FlgB [Clostridium thermocellum
          ATCC 27405]
          Length = 134

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 4/70 (5%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          +  A   R   ++ N++N DT G++   V F E +    ND   KI  + +  E++    
Sbjct: 15 SLDAALLRNEAISQNIANVDTTGYKRKTVAFEEYL----NDARAKIKGIRTRPEHIPVGA 70

Query: 71 GSFISTGTEL 80
             +    ++
Sbjct: 71 RDVMDIDIKV 80


>gi|325916941|ref|ZP_08179185.1| flagellar hook-associated protein FlgK [Xanthomonas vesicatoria
          ATCC 35937]
 gi|325536844|gb|EGD08596.1| flagellar hook-associated protein FlgK [Xanthomonas vesicatoria
          ATCC 35937]
          Length = 624

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 27/42 (64%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
           +  + G +A +A ++ LSTV+ N++N +T G+   +V+F+ 
Sbjct: 1  MSIMSTGTSALIAFQRALSTVSHNVANINTEGYSRQRVEFAT 42


>gi|262276419|ref|ZP_06054228.1| flagellar basal-body rod protein FlgC [Grimontia hollisae CIP
           101886]
 gi|262220227|gb|EEY71543.1| flagellar basal-body rod protein FlgC [Grimontia hollisae CIP
           101886]
          Length = 136

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 23/43 (53%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N M EM  MI  ++ + +   + + +++ ++  ++
Sbjct: 91  GYIYKPNVNVMEEMANMISASRSYQTNVEVAEASKQMLMRTLQ 133



 Score = 35.6 bits (80), Expect = 5.6,   Method: Composition-based stats.
 Identities = 11/82 (13%), Positives = 26/82 (31%), Gaps = 6/82 (7%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56
            FN+  +A  A   RL+T + N++N ++V       ++     F+  +   +      +
Sbjct: 5  NVFNVTGSAMSAESVRLNTTSSNLANANSVSSSAAETYKARHPVFAAELNRFQQGASVPV 64

Query: 57 SFVASGKEYLSKEVGSFISTGT 78
                +               
Sbjct: 65 QVKGIVESQKPLRAEYNPEHPM 86


>gi|239834444|ref|ZP_04682772.1| flagellar basal-body rod protein FlgC [Ochrobactrum intermedium LMG
           3301]
 gi|239822507|gb|EEQ94076.1| flagellar basal-body rod protein FlgC [Ochrobactrum intermedium LMG
           3301]
          Length = 140

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 8/47 (17%), Positives = 20/47 (42%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           G++   N N + EM  M    + + +   ++ +  + +   I  + S
Sbjct: 93  GYVRYPNVNMVVEMADMREANRSYEANLQVVKQARELISMTIDLLRS 139



 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/106 (13%), Positives = 32/106 (30%), Gaps = 8/106 (7%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQ 54
           Q++  I  +   A   RL  V++N++N  +         +R   V F   +       + 
Sbjct: 7   QSTLKIAASGLSAQSTRLRIVSENIANAQSTAKTADADPYRRKTVSFRTELEQGTGAAEV 66

Query: 55  KISFVA-SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
           +I+ V      ++ +   S  +                  +     
Sbjct: 67  RIAEVGKDTSPFIEQYEPSHPAADERGYVRYPNVNMVVEMADMREA 112


>gi|312876493|ref|ZP_07736476.1| flagellar basal-body rod protein FlgB [Caldicellulosiruptor
          lactoaceticus 6A]
 gi|311796704|gb|EFR13050.1| flagellar basal-body rod protein FlgB [Caldicellulosiruptor
          lactoaceticus 6A]
          Length = 133

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 9/60 (15%), Positives = 21/60 (35%)

Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76
          +R   +++N++N DT G++   + F   +    N  +         +           S 
Sbjct: 20 KRNEIISNNIANADTPGYKAKDLDFEAFLQKSLNQEENLELVTTDERHIKESSSSQDNSI 79


>gi|256004780|ref|ZP_05429755.1| flagellar basal-body rod protein FlgB [Clostridium thermocellum
          DSM 2360]
 gi|255991230|gb|EEU01337.1| flagellar basal-body rod protein FlgB [Clostridium thermocellum
          DSM 2360]
 gi|316940781|gb|ADU74815.1| flagellar basal-body rod protein FlgB [Clostridium thermocellum
          DSM 1313]
          Length = 134

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 4/70 (5%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          +  A   R   ++ N++N DT G++   V F E +    ND   KI  + +  E++    
Sbjct: 15 SLDAALLRNEAISQNIANVDTPGYKRKTVAFEEYL----NDARAKIKGIRTRPEHIPVGA 70

Query: 71 GSFISTGTEL 80
             +    ++
Sbjct: 71 RDVMDIDIKV 80


>gi|281417194|ref|ZP_06248214.1| flagellar basal-body rod protein FlgB [Clostridium thermocellum
          JW20]
 gi|281408596|gb|EFB38854.1| flagellar basal-body rod protein FlgB [Clostridium thermocellum
          JW20]
          Length = 134

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 4/70 (5%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          +  A   R   ++ N++N DT G++   V F E +    ND   KI  + +  E++    
Sbjct: 15 SLDAALLRNEAISQNIANVDTPGYKRKTVAFEEYL----NDARAKIKGIRTRPEHIPVGA 70

Query: 71 GSFISTGTEL 80
             +    ++
Sbjct: 71 RDVMDIDIKV 80


>gi|20806999|ref|NP_622170.1| flagellar hook-associated protein FlgK [Thermoanaerobacter
          tengcongensis MB4]
 gi|20515482|gb|AAM23774.1| Flagellar hook-associated protein [Thermoanaerobacter
          tengcongensis MB4]
          Length = 482

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 7/54 (12%), Positives = 17/54 (31%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56
              I        ++ L     N++N +T G+    V  + +       +  + 
Sbjct: 5  QGLEIAKTGLFVSQKALEVTGHNIANANTPGYTRQVVDMASIAPPTTFGMYDQW 58



 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 6/41 (14%), Positives = 16/41 (39%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  +   EM  M+   + + +   +I   ++ +   I  + 
Sbjct: 438 SGVSLDEEMTNMLKYQKSYAACARVITAMDELIDTVINRMG 478


>gi|254255085|ref|ZP_04948402.1| Flagellar basal body rod protein [Burkholderia dolosa AUO158]
 gi|124899730|gb|EAY71573.1| Flagellar basal body rod protein [Burkholderia dolosa AUO158]
          Length = 133

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 22/43 (51%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G +  SN +++ EM  M+  ++ F++   ++   +    + +R
Sbjct: 87  GMVYYSNVSAVEEMTDMMAASRAFSTNAEVLSRVKAMQQDLLR 129



 Score = 45.2 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 5/44 (11%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTVG-----FRTIKVKFSEVV 45
          I  +A  A   RL T+A N++N DT G     +R  K  F+ V 
Sbjct: 10 IAGSAMAAQTVRLDTIASNLANADTAGTEGTAYRARKPVFAAVY 53


>gi|222112279|ref|YP_002554543.1| flagellar hook-associated protein flgk [Acidovorax ebreus TPSY]
 gi|221731723|gb|ACM34543.1| flagellar hook-associated protein FlgK [Acidovorax ebreus TPSY]
          Length = 672

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 20/51 (39%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
           +  N+G  A LA +  L T   N++N  T G+    V    V G      
Sbjct: 1  MSLLNVGARALLANQVALQTTGHNIANVSTAGYSRQNVAMETVQGQFTGSG 51



 Score = 42.2 bits (97), Expect = 0.071,   Method: Composition-based stats.
 Identities = 6/41 (14%), Positives = 15/41 (36%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E  ++I   Q + +   ++   +      I+ + 
Sbjct: 631 SGVNLDEEAARLIQYQQAYQASAKMLQIAQNIFDNLIQTMG 671


>gi|302872574|ref|YP_003841210.1| flagellar basal-body rod protein FlgB [Caldicellulosiruptor
          obsidiansis OB47]
 gi|302575433|gb|ADL43224.1| flagellar basal-body rod protein FlgB [Caldicellulosiruptor
          obsidiansis OB47]
          Length = 133

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 9/60 (15%), Positives = 22/60 (36%)

Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76
          +R   +++N++N DT G++   + F   +    N  +       + +           S 
Sbjct: 20 KRNEIISNNIANADTPGYKAKDLNFEAFLQRSFNQEESLELVTTNERHIKESSSSPDNSI 79


>gi|126668556|ref|ZP_01739510.1| flagellar basal-body rod protein C [Marinobacter sp. ELB17]
 gi|126626961|gb|EAZ97604.1| flagellar basal-body rod protein C [Marinobacter sp. ELB17]
          Length = 147

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 18/43 (41%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N   EM  M+  ++ F     +++  +  M   + 
Sbjct: 101 GYVYYPNVNVAEEMADMMSSSRSFQMNVDIMNTAKSMMQRILT 143



 Score = 39.5 bits (90), Expect = 0.42,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 6/58 (10%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDT----VG--FRTIKVKFSEVVGAIKNDIDQ 54
            F+I  +   A   RL+T A N++N +T     G  +R  K  F+ V  ++ N    
Sbjct: 5  NIFDIAGSGMTAQSLRLNTTASNIANAETASSSTGETYRARKPVFAAVQQSLLNGNQP 62


>gi|292487937|ref|YP_003530812.1| flagellar basal-body rod protein FlgC [Erwinia amylovora CFBP1430]
 gi|292899156|ref|YP_003538525.1| flagellar basal-body rod protein [Erwinia amylovora ATCC 49946]
 gi|291199004|emb|CBJ46115.1| flagellar basal-body rod protein [Erwinia amylovora ATCC 49946]
 gi|291553359|emb|CBA20404.1| Flagellar basal-body rod protein flgC [Erwinia amylovora CFBP1430]
 gi|312172058|emb|CBX80315.1| Flagellar basal-body rod protein flgC [Erwinia amylovora ATCC
           BAA-2158]
          Length = 134

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 11/92 (11%), Positives = 33/92 (35%)

Query: 148 ISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSM 207
                K +      +     G VR       P       E  + +   RG+++  N + +
Sbjct: 40  QPYVAKQVVFQTNAAPGSPTGGVRVAEVIDDPTPAKLVYEPGNPMADARGYIKMPNVDVV 99

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            E    +  ++ + +   +++  ++ M++ + 
Sbjct: 100 AETVNSMSASRSYQANVEVLNTVKQMMMKTLT 131


>gi|189426324|ref|YP_001953501.1| flagellar hook-associated protein FlgK [Geobacter lovleyi SZ]
 gi|189422583|gb|ACD96981.1| flagellar hook-associated protein FlgK [Geobacter lovleyi SZ]
          Length = 465

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 8/49 (16%), Positives = 18/49 (36%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
            IG       +     V++N++N +T G+   ++       +  N   
Sbjct: 7  LQIGTTGMRVYQVATEVVSENIANVNTPGYSRQRIVLETAEASTHNGFP 55



 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 5/39 (12%), Positives = 15/39 (38%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +S  +   E+  ++   + + +   LI      +  A+ 
Sbjct: 424 NSGVSLDEELTDLMKYQRSYQACAKLITTAGDMLDIAVN 462


>gi|297538902|ref|YP_003674671.1| flagellar hook-associated protein FlgK [Methylotenera sp. 301]
 gi|297258249|gb|ADI30094.1| flagellar hook-associated protein FlgK [Methylotenera sp. 301]
          Length = 650

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 20/173 (11%), Positives = 41/173 (23%), Gaps = 1/173 (0%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M    +IG +A  A +  LST   N++N  T G+ + +V       A  +          
Sbjct: 1   MADILSIGKSALAAAQVGLSTTGHNIANASTPGY-SRQVVIQAAAQAQSSGSGYIGQGTE 59

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
                 +               +     + +  S    +L+              ++   
Sbjct: 60  VASITRAFNEILSKQVVNSQAASSSSQVYASQLSNINNMLSDASAGLNPAISDFFNSVSD 119

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRE 173
                      Q         V      +     + +     +  S   V   
Sbjct: 120 LAANPSDIPTRQSMLSYAQSLVNRLQSTNSSLNEVRSDVNTQLTGSVNLVNTY 172



 Score = 36.8 bits (83), Expect = 2.4,   Method: Composition-based stats.
 Identities = 14/189 (7%), Positives = 51/189 (26%), Gaps = 5/189 (2%)

Query: 52  IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDD 111
                +   +     +  +   +S            +  +   P G  +T      ++  
Sbjct: 463 PPTGSNLTGTLGVTYASGMPGTLSMAPSTQPVTVTVSGVSTVYPAGSPITYTSGATISVG 522

Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV-DMSQGFV 170
           G   + +G     D  ++    P  +    +    +         T    +  ++  G  
Sbjct: 523 GLSFAITGTPANGDKFTLSASGPGDNRNGLLLADLQKQGTINNSTTTYSSAFAELVNGVG 582

Query: 171 RRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
            +       +     + + +   ++     +S  N   E   ++   Q + +   ++   
Sbjct: 583 NKTRELNITSTSEAKVLEQATAAMQS----ESGVNLDEEATNLLRYQQAYQAAGKMMQIA 638

Query: 231 EKSMLEAIR 239
            +     ++
Sbjct: 639 SQLFDTLLQ 647


>gi|157373209|ref|YP_001471809.1| flagellar basal-body rod protein FlgC [Shewanella sediminis
           HAW-EB3]
 gi|157315583|gb|ABV34681.1| flagellar basal-body rod protein FlgC [Shewanella sediminis
           HAW-EB3]
          Length = 139

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 28/48 (58%), Gaps = 1/48 (2%)

Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           +G++  SN N++ EM  M+  ++ F +   ++++  +SM + +  + +
Sbjct: 92  QGYVAYSNVNTVEEMADMMAASRSFETSVEVMNQA-RSMQQGLLQLGT 138


>gi|268680292|ref|YP_003304723.1| flagellar basal-body rod protein FlgC [Sulfurospirillum deleyianum
           DSM 6946]
 gi|268618323|gb|ACZ12688.1| flagellar basal-body rod protein FlgC [Sulfurospirillum deleyianum
           DSM 6946]
          Length = 163

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 18/42 (42%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N N + EM  +I  T+ + +  +     +     AI
Sbjct: 118 GYVAYPNINPVIEMANLIEATRAYQANVSAFQSAKAIAQSAI 159



 Score = 41.8 bits (96), Expect = 0.092,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 22/49 (44%), Gaps = 6/49 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44
           +SF+I      A   R+  ++ N++N +T     G  ++   V F  V
Sbjct: 4  LSSFDISSYGLSAQRFRMDLISSNIANANTTRTSEGGPYQRKDVVFKAV 52


>gi|54297180|ref|YP_123549.1| flagellar basal body rod protein FlgC [Legionella pneumophila str.
           Paris]
 gi|53750965|emb|CAH12376.1| Flagellar basal-body rod protein FlgC [Legionella pneumophila str.
           Paris]
          Length = 140

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 22/43 (51%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           GF+  SN N + EM  +I  ++ +     L++  ++ M   ++
Sbjct: 95  GFVYTSNINYVEEMANIISASRSYQMNIELLNTTKQLMQRTLQ 137


>gi|209964219|ref|YP_002297134.1| flagellar basal-body rod protein FlgC [Rhodospirillum centenum SW]
 gi|209957685|gb|ACI98321.1| flagellar basal-body rod protein FlgC [Rhodospirillum centenum SW]
          Length = 136

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 24/71 (33%), Gaps = 6/71 (8%)

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
            +       P  P  D        G++   N NS+ E   M    + + +   +ID   +
Sbjct: 72  RSDFQRRYDPGHPSADAE------GYVLTPNVNSLVESMDMREAQRSYEANLNVIDTTRQ 125

Query: 233 SMLEAIRNIAS 243
            +   I  + S
Sbjct: 126 MLTRTIELLRS 136



 Score = 43.7 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 28/82 (34%), Gaps = 7/82 (8%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTD----TVG---FRTIKVKFSEVVGAIKNDIDQ 54
            + ++  A       RL  +A+N++N +    T G   +R   V F  V+         
Sbjct: 4  MNTLSLSAAGLKVQGTRLRVIAENLANANSTAPTPGDLPYRRKVVLFQNVLNRELGMPTV 63

Query: 55 KISFVASGKEYLSKEVGSFIST 76
          K+  +   +    +       +
Sbjct: 64 KVKKIDVDRSDFQRRYDPGHPS 85


>gi|58582202|ref|YP_201218.1| flagellar hook-associated protein FlgK [Xanthomonas oryzae pv.
          oryzae KACC10331]
 gi|188576762|ref|YP_001913691.1| flagellar hook-associated protein FlgK [Xanthomonas oryzae pv.
          oryzae PXO99A]
 gi|188576954|ref|YP_001913883.1| flagellar hook-associated protein FlgK [Xanthomonas oryzae pv.
          oryzae PXO99A]
 gi|58426796|gb|AAW75833.1| flagellar protein [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|188521214|gb|ACD59159.1| flagellar hook-associated protein FlgK [Xanthomonas oryzae pv.
          oryzae PXO99A]
 gi|188521406|gb|ACD59351.1| flagellar hook-associated protein FlgK [Xanthomonas oryzae pv.
          oryzae PXO99A]
          Length = 624

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 27/42 (64%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
           +  + G +A +A ++ LSTV+ N++N +T G+   +V+F+ 
Sbjct: 1  MSIMSTGTSALIAFQRALSTVSHNVANINTEGYSRQRVEFAT 42


>gi|291558197|emb|CBL35314.1| flagellar basal-body rod protein FlgC [Eubacterium siraeum
          V10Sc8a]
          Length = 160

 Score = 49.5 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 6/48 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43
           +S NI  +   A   RL  ++ N++N  T     G  +R   V FSE
Sbjct: 4  LSSLNIAASGMAAERLRLDVISQNVANAKTTRTEDGTPYRRQVVLFSE 51



 Score = 41.0 bits (94), Expect = 0.14,   Method: Composition-based stats.
 Identities = 5/43 (11%), Positives = 16/43 (37%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G+    N +   E    +  T+ + +   +++  +     A+ 
Sbjct: 114 GYYYLPNVDVAEEQMDAMAATRSYEANLAVLNAVKSMAQTALS 156


>gi|163794133|ref|ZP_02188106.1| flagellar basal body rod protein [alpha proteobacterium BAL199]
 gi|159180747|gb|EDP65266.1| flagellar basal body rod protein [alpha proteobacterium BAL199]
          Length = 136

 Score = 49.5 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 30/73 (41%), Gaps = 6/73 (8%)

Query: 171 RRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
           R +        P  PL D        G+++  N N++ EM  M    + + +  ++I+ +
Sbjct: 70  RDQGDFNIVYEPHHPLADDK------GYIKMPNVNTLIEMTDMREAERSYEANVSVIESS 123

Query: 231 EKSMLEAIRNIAS 243
           +  +   +  + +
Sbjct: 124 KSLIERTLELLRA 136



 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 15/109 (13%), Positives = 31/109 (28%), Gaps = 10/109 (9%)

Query: 1   MQ--TSFNIGLAAQLALEQRLSTVADNMSNT----DTVG---FRTIKVKFS-EVVGAIKN 50
           M    +  I  +   A   RL  VA+N++N     +T     +R   + F  E+   I  
Sbjct: 1   MDLTNAIKISASGMRAQGTRLRVVAENVANAESLGNTAADDPYRRKTITFENELDRKINA 60

Query: 51  DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
           D+ +         ++             +    +         +     
Sbjct: 61  DMVRISKIGRDQGDFNIVYEPHHPLADDKGYIKMPNVNTLIEMTDMREA 109


>gi|153011526|ref|YP_001372740.1| flagellar basal body rod protein FlgC [Ochrobactrum anthropi ATCC
           49188]
 gi|151563414|gb|ABS16911.1| flagellar basal-body rod protein FlgC [Ochrobactrum anthropi ATCC
           49188]
          Length = 140

 Score = 49.5 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 8/47 (17%), Positives = 20/47 (42%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           G++   N N + EM  M    + + +   ++ +  + +   I  + S
Sbjct: 93  GYVRYPNVNMVVEMADMREANRSYEANLQVVKQARELISMTIDLLRS 139



 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/106 (13%), Positives = 32/106 (30%), Gaps = 8/106 (7%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQ 54
           Q++  I  +   A   RL  V++N++N  +         +R   V F   +       + 
Sbjct: 7   QSTLKIAASGLSAQSTRLRIVSENIANAQSTAETADADPYRRKTVSFRTELEQGTGAAEV 66

Query: 55  KISFVA-SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
           +I+ V      ++ +   S  +                  +     
Sbjct: 67  RIAEVGKDTSPFIEQYEPSHPAADERGYVRYPNVNMVVEMADMREA 112


>gi|312135857|ref|YP_004003195.1| flagellar basal-body rod protein flgb [Caldicellulosiruptor
          owensensis OL]
 gi|311775908|gb|ADQ05395.1| flagellar basal-body rod protein FlgB [Caldicellulosiruptor
          owensensis OL]
          Length = 133

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 9/60 (15%), Positives = 22/60 (36%)

Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76
          +R   +++N++N DT G++   + F   +    N  +       + +           S 
Sbjct: 20 KRNEIISNNIANADTPGYKAKDLNFEAFLQRSFNQEESLELVTTNERHIKESSSNPDNSI 79


>gi|118589983|ref|ZP_01547387.1| flagellar basal-body rod protein C [Stappia aggregata IAM 12614]
 gi|118437480|gb|EAV44117.1| flagellar basal-body rod protein C [Stappia aggregata IAM 12614]
          Length = 138

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 12/97 (12%), Positives = 35/97 (36%)

Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNAN 205
           G+   + K I     +S  +    V  +  G          +       + G+++  N N
Sbjct: 41  GDDPYRRKTITFESEFSRAVQANLVSVKGIGEDKAEFAVEYDPGHPAADENGYVKMPNVN 100

Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           ++ E+  M    + + +   ++ +  + ++  I  + 
Sbjct: 101 TLLELADMRETNRSYEANLKVMTQAREMVMRNIDLLR 137



 Score = 39.9 bits (91), Expect = 0.36,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 19/51 (37%), Gaps = 7/51 (13%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAI 48
            I  A   A  +RL  V++N++N  + G       +R   + F       
Sbjct: 9  LQISGAGLRAQSERLRVVSENLANARSTGEAAGDDPYRRKTITFESEFSRA 59


>gi|330502740|ref|YP_004379609.1| flagellar hook-associated protein FlgK [Pseudomonas mendocina
          NK-01]
 gi|328917026|gb|AEB57857.1| flagellar hook-associated protein FlgK [Pseudomonas mendocina
          NK-01]
          Length = 681

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 19/52 (36%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M    NIGL+   A +  L+    N+ N +T GF   +   +          
Sbjct: 1  MADLLNIGLSGLAANKTSLAVTGHNIVNVNTPGFSRQETIQATRTPQFSGAG 52


>gi|221636051|ref|YP_002523927.1| flagellar basal-body rod protein FlgB [Thermomicrobium roseum DSM
          5159]
 gi|221157824|gb|ACM06942.1| flagellar basal-body rod protein FlgB [Thermomicrobium roseum DSM
          5159]
          Length = 138

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 27/54 (50%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65
            AL  R    A N++N +T GFR   V+F +++ A+ N    ++  V +   +
Sbjct: 15 LDALALRQQVTASNVANAETPGFRGQAVRFEDLLQAMLNGTFARLPLVRTDSRH 68


>gi|120613066|ref|YP_972744.1| flagellar hook-associated protein FlgK [Acidovorax citrulli
          AAC00-1]
 gi|120591530|gb|ABM34970.1| flagellar hook-associated protein FlgK [Acidovorax citrulli
          AAC00-1]
          Length = 642

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 21/51 (41%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
           +  N+G  A LA +  L T   N++N +T G+    +    V G      
Sbjct: 1  MSLLNVGARALLANQVALQTTGHNIANVNTAGYSRQTLSLQTVQGQFTGGG 51



 Score = 42.9 bits (99), Expect = 0.036,   Method: Composition-based stats.
 Identities = 19/149 (12%), Positives = 37/149 (24%), Gaps = 9/149 (6%)

Query: 99  ILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158
             T      +   G  ++  G     D   V   +  +         G  S    +    
Sbjct: 498 AYTPGQPITID--GWQITLKGTPGTGDTVKVGNVLDAQYGDAYKRNAGNASAIDALGDVK 555

Query: 159 GLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLED-----SNANSMYEMGQM 213
                 MS G+        +              T+    LE      S  N   E  ++
Sbjct: 556 MFDDATMSDGYAGLMAQVGTRMQNAK-YASDVSATISTN-LERDRTAVSGVNLDEEAAKL 613

Query: 214 IHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           I   Q + +   ++   +      I+ + 
Sbjct: 614 IQYQQAYQASAKVLQIAQSIFDNLIQTMR 642


>gi|91201245|emb|CAJ74305.1| similar to flagellar hook-associated protein FlgK [Candidatus
           Kuenenia stuttgartiensis]
          Length = 653

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 7/42 (16%), Positives = 17/42 (40%)

Query: 200 EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           E S  N   E+  +I   Q + +    I   ++ +   + ++
Sbjct: 612 EVSGVNIDEELVTLIRFQQAYQASAKYISTVDRLINTLLNSL 653



 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 30/75 (40%), Gaps = 3/75 (4%)

Query: 1  MQTS-FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE--VVGAIKNDIDQKIS 57
          M +S   IG++  LA ++ +   A N+SN +T G+    V  +    +      I Q + 
Sbjct: 1  MASSDIQIGMSGVLAAQRAMMVSAHNISNANTKGYTKQTVSLATRLPLQTTIGSIGQGVD 60

Query: 58 FVASGKEYLSKEVGS 72
           V   ++        
Sbjct: 61 LVKIMRQKDDYLNSR 75


>gi|114777912|ref|ZP_01452826.1| probable flagellar hook-associated protein [Mariprofundus
          ferrooxydans PV-1]
 gi|114551699|gb|EAU54251.1| probable flagellar hook-associated protein [Mariprofundus
          ferrooxydans PV-1]
          Length = 575

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 9/81 (11%), Positives = 34/81 (41%), Gaps = 2/81 (2%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--IDQKISFVAS 61
          S NI  ++    ++ ++ V+ N++N +T G+       + +         + + ++    
Sbjct: 5  SLNIAASSLQTQQKSINVVSHNIANANTAGYSRQVADIATLTPESVGGLSLGRGVNVTGI 64

Query: 62 GKEYLSKEVGSFISTGTELDF 82
           +        +  + G+++++
Sbjct: 65 SRIVDPMINSALSNNGSQMNY 85



 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 7/37 (18%), Positives = 15/37 (40%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N+  E+  MI   + + +   +I    + M   +
Sbjct: 535 SGVNTDEELVSMIKFQRAYEASAKIITTTNQMMDSLL 571


>gi|84624094|ref|YP_451466.1| flagellar hook-associated protein FlgK [Xanthomonas oryzae pv.
          oryzae MAFF 311018]
 gi|84368034|dbj|BAE69192.1| flagellar protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
          Length = 624

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 27/42 (64%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
           +  + G +A +A ++ LSTV+ N++N +T G+   +V+F+ 
Sbjct: 1  MSIMSTGTSALIAFQRALSTVSHNVANINTEGYSRQRVEFAT 42


>gi|308050018|ref|YP_003913584.1| flagellar hook-associated protein FlgK [Ferrimonas balearica DSM
          9799]
 gi|307632208|gb|ADN76510.1| flagellar hook-associated protein FlgK [Ferrimonas balearica DSM
          9799]
          Length = 457

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 24/59 (40%), Gaps = 4/59 (6%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
                GL+   A +  L+T ++N++N  T G+   ++    +V A         S V 
Sbjct: 1  MNMLGNGLSGLHAAQMHLATTSNNIANATTPGYSRQQL----LVSARPGGFMGAGSGVQ 55



 Score = 42.2 bits (97), Expect = 0.061,   Method: Composition-based stats.
 Identities = 6/38 (15%), Positives = 13/38 (34%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           S  N   E   +I   Q + +   +I   ++     + 
Sbjct: 418 SAVNLDEEGINIIVYQQAYQANAKVISTADQLFQTMMT 455


>gi|291520177|emb|CBK75398.1| flagellar hook-associated protein FlgK [Butyrivibrio fibrisolvens
          16/4]
          Length = 494

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 9/37 (24%), Positives = 18/37 (48%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
             I  +     + +++T A+N+SN +T G+    V 
Sbjct: 7  GLTIAASGLNTAQAQINTTANNISNVNTTGYSKQVVN 43


>gi|323492332|ref|ZP_08097485.1| flagellar hook-associated protein FlgK [Vibrio brasiliensis LMG
          20546]
 gi|323313379|gb|EGA66490.1| flagellar hook-associated protein FlgK [Vibrio brasiliensis LMG
          20546]
          Length = 457

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 18/43 (41%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44
              NI L+   A    L   A N+SN +T G+   +   + V
Sbjct: 1  MNLVNIALSGLNANRVALDVTAQNVSNINTPGYSRQQAMMTSV 43


>gi|149911704|ref|ZP_01900312.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Moritella sp. PE36]
 gi|149805234|gb|EDM65251.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Moritella sp. PE36]
          Length = 140

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 21/42 (50%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N N M EM  MI  ++ + +   + D  +K + + +
Sbjct: 93  GYVYRPNVNIMEEMANMISASRSYQTNVQIADAAKKMLNKTL 134



 Score = 37.9 bits (86), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 22/53 (41%), Gaps = 6/53 (11%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIK 49
            F+I  +A  A   RL+T A N++N ++V       ++     F   +    
Sbjct: 5  RVFDIAGSAMSAQSVRLNTTASNLANANSVSSSAGETYKARYPIFQAQLDQAN 57


>gi|88799019|ref|ZP_01114600.1| flagellar basal-body rod protein FlgC [Reinekea sp. MED297]
 gi|88778246|gb|EAR09440.1| flagellar basal-body rod protein FlgC [Reinekea sp. MED297]
          Length = 146

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 19/43 (44%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N + EM  M+  ++ F     + +  +  M + + 
Sbjct: 101 GYVYYPNVNVVEEMADMMSASRSFTVNVEVFNTAKTLMQKTLT 143



 Score = 37.9 bits (86), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 22/56 (39%), Gaps = 6/56 (10%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDI 52
            F+I  +   A   RL+T A N++N  +V       +R  K  F  +     +  
Sbjct: 5  NVFDISGSGMNAQSIRLNTTASNLANAQSVSSSIDETYRARKPVFQHIQSQYIDRS 60


>gi|289208112|ref|YP_003460178.1| flagellar basal-body rod protein FlgC [Thioalkalivibrio sp.
          K90mix]
 gi|288943743|gb|ADC71442.1| flagellar basal-body rod protein FlgC [Thioalkalivibrio sp.
          K90mix]
          Length = 139

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 31/81 (38%), Gaps = 6/81 (7%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKI 56
            FN   +A  A   RL+TVA N++N +TV       +R  +V F  V+     +     
Sbjct: 6  NLFNTSASALTAQSVRLNTVASNLANANTVATNPDEAYRAKQVLFQTVMNQADPNGASNG 65

Query: 57 SFVASGKEYLSKEVGSFISTG 77
            VA   E  +     +    
Sbjct: 66 VRVAGIDESQAPPQPHYEPNH 86



 Score = 42.5 bits (98), Expect = 0.055,   Method: Composition-based stats.
 Identities = 4/43 (9%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++     + + EM  M+  ++ + +   +++ + + +   ++
Sbjct: 93  GYIFRPAISVVEEMANMMSASRNYEANVEVMETSRQLLQRTLQ 135


>gi|52841449|ref|YP_095248.1| flagellar basal body rod protein FlgC [Legionella pneumophila
           subsp. pneumophila str. Philadelphia 1]
 gi|54294161|ref|YP_126576.1| flagellar basal body rod protein FlgC [Legionella pneumophila str.
           Lens]
 gi|148358804|ref|YP_001250011.1| flagellar basal body rod protein FlgC [Legionella pneumophila str.
           Corby]
 gi|296106849|ref|YP_003618549.1| flagellar basal-body rod protein FlgC [Legionella pneumophila
           2300/99 Alcoy]
 gi|52628560|gb|AAU27301.1| flagellar basal body rod protein FlgC [Legionella pneumophila
           subsp. pneumophila str. Philadelphia 1]
 gi|53753993|emb|CAH15464.1| Flagellar basal-body rod protein FlgC [Legionella pneumophila str.
           Lens]
 gi|148280577|gb|ABQ54665.1| flagellar basal body rod protein FlgC [Legionella pneumophila str.
           Corby]
 gi|295648750|gb|ADG24597.1| flagellar basal-body rod protein FlgC [Legionella pneumophila
           2300/99 Alcoy]
 gi|307609975|emb|CBW99504.1| flagellar basal-body rod protein FlgC [Legionella pneumophila 130b]
          Length = 140

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 22/43 (51%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           GF+  SN N + EM  +I  ++ +     L++  ++ M   ++
Sbjct: 95  GFVYTSNINYVEEMANIISASRSYQMNIELLNTTKQLMQRTLQ 137


>gi|323341352|ref|ZP_08081596.1| hypothetical protein HMPREF0542_12027 [Lactobacillus ruminis ATCC
          25644]
 gi|323091229|gb|EFZ33857.1| hypothetical protein HMPREF0542_12027 [Lactobacillus ruminis ATCC
          25644]
          Length = 514

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 21/55 (38%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFV 59
               +   A +  L T A N++NT+T G+   +V  +     +        + V
Sbjct: 8  LGTATSGITANQVALQTTAHNIANTNTDGYSRQRVHMTTKPPYVIAGTGTIGTGV 62



 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 15/42 (35%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            S  N   EM  +I   Q F + T ++    + +   +    
Sbjct: 472 MSGVNINEEMSDVIKFQQGFQANTRVLSVIAEMLDTLVNKTG 513


>gi|145298488|ref|YP_001141329.1| flagellar basal body protein FlgB [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142851260|gb|ABO89581.1| flagellar basal body protein FlgB [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 132

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/94 (14%), Positives = 34/94 (36%)

Query: 16  EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIS 75
            +R   ++ N++N DT GF+   + FSE +   ++     ++  +     L  +    + 
Sbjct: 20  SKRAEVLSSNIANADTPGFKARDINFSEALAQAQHQQGFGMATTSEKHFALQSDAPGLMQ 79

Query: 76  TGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109
               L           ++  R   L     ++ +
Sbjct: 80  YRNPLQPDTGDGNTVDVQQERSEFLRNSLEYQTS 113


>gi|328545507|ref|YP_004305616.1| flagellar basal-body rod protein FlgC [polymorphum gilvum
           SL003B-26A1]
 gi|326415248|gb|ADZ72311.1| Flagellar basal-body rod protein FlgC [Polymorphum gilvum
           SL003B-26A1]
          Length = 138

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 7/42 (16%), Positives = 19/42 (45%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G+++  N N + EM  M    + + +   ++ +    ++  I
Sbjct: 92  GYVKLPNVNLLVEMADMRETNRSYEANLKMMTQARTMVMRTI 133



 Score = 41.4 bits (95), Expect = 0.099,   Method: Composition-based stats.
 Identities = 8/29 (27%), Positives = 15/29 (51%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVG 33
            I  +   A  +RL  V++N++N  + G
Sbjct: 9  LKISASGLQAQSERLRVVSENLANAQSTG 37


>gi|254478858|ref|ZP_05092223.1| flagellar hook-associated protein FlgK [Carboxydibrachium
          pacificum DSM 12653]
 gi|214035220|gb|EEB75929.1| flagellar hook-associated protein FlgK [Carboxydibrachium
          pacificum DSM 12653]
          Length = 484

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 7/54 (12%), Positives = 17/54 (31%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56
              I        ++ L     N++N +T G+    V  + +       +  + 
Sbjct: 5  QGLEIAKTGLFVSQKALEVTGHNIANANTPGYTRQVVDMASIAPPTTFGMYDQW 58



 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 6/42 (14%), Positives = 16/42 (38%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            S  +   EM  M+   + + +   +I   ++ +   I  + 
Sbjct: 439 TSGVSLDEEMTNMLKYQKSYAACARVITAMDELIDTIINRMG 480


>gi|187926948|ref|YP_001893293.1| flagellar hook-associated protein FlgK [Ralstonia pickettii 12J]
 gi|241665277|ref|YP_002983636.1| flagellar hook-associated protein FlgK [Ralstonia pickettii 12D]
 gi|187728702|gb|ACD29866.1| flagellar hook-associated protein FlgK [Ralstonia pickettii 12J]
 gi|240867304|gb|ACS64964.1| flagellar hook-associated protein FlgK [Ralstonia pickettii 12D]
          Length = 645

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 27/83 (32%), Gaps = 2/83 (2%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE--VVGAIKNDIDQKISFVA 60
          +  NIG       +  L    +N++N +T G+   +   +E   + A    + Q  +   
Sbjct: 4  SLLNIGATGLRVADINLQVTGNNIANANTPGYSRQEAVQTENIPLYAGVGYLGQGANVTT 63

Query: 61 SGKEYLSKEVGSFISTGTELDFA 83
            + Y         +       A
Sbjct: 64 VKRIYDQFLTAQVQNGQAATSAA 86


>gi|256376483|ref|YP_003100143.1| flagellar hook-associated protein FlgK [Actinosynnema mirum DSM
           43827]
 gi|255920786|gb|ACU36297.1| flagellar hook-associated protein FlgK [Actinosynnema mirum DSM
           43827]
          Length = 459

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 4/39 (10%), Positives = 13/39 (33%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            N   E+  M+   + + +   ++   +  +   I    
Sbjct: 420 VNLDEELTSMLTYQRSYEAAARVMSAVDSMLDTLINRTG 458



 Score = 43.3 bits (100), Expect = 0.027,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 17/42 (40%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44
          +     L    A  + L     N++N  T G+   +V+ + V
Sbjct: 6  SGITSALGGMQAARRGLEVAGQNIANARTEGYSRQRVETAAV 47


>gi|256830170|ref|YP_003158898.1| flagellar hook-associated protein FlgK [Desulfomicrobium
          baculatum DSM 4028]
 gi|256579346|gb|ACU90482.1| flagellar hook-associated protein FlgK [Desulfomicrobium
          baculatum DSM 4028]
          Length = 697

 Score = 49.1 bits (115), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 28/74 (37%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
          + FNIG  +  A +  +  V +N+SN +T G+    V+F +      +         A+ 
Sbjct: 6  SLFNIGKQSLFANQAAIEVVGNNISNANTEGYSRQAVRFEDGYYISYSPGQLGTGVNAAE 65

Query: 63 KEYLSKEVGSFIST 76
                E    +  
Sbjct: 66 VIRYFDEFTEVMYN 79



 Score = 43.7 bits (101), Expect = 0.023,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 13/37 (35%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N   EM  +I     + +   LI   E  +   +
Sbjct: 657 SGVNLDEEMTNLIKFQHAYTAAAKLITTAESMLEVLL 693


>gi|225375315|ref|ZP_03752536.1| hypothetical protein ROSEINA2194_00940 [Roseburia inulinivorans DSM
           16841]
 gi|225212804|gb|EEG95158.1| hypothetical protein ROSEINA2194_00940 [Roseburia inulinivorans DSM
           16841]
          Length = 146

 Score = 49.1 bits (115), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 20/43 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N++ EM  +I  ++ + + TT  +  +      + 
Sbjct: 101 GYVSYPNVNTVTEMTNLIDASRAYEANTTAFEAAKSIAQSGLS 143



 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 6/47 (12%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43
           +F+I  +   A   R+ T+A+N++N +T     G  +R   V F+E
Sbjct: 5  QAFDISASGMTAERFRMDTIAENIANVNTTRTEDGTPYRRKIVTFAE 51


>gi|83309714|ref|YP_419978.1| flagellar basal body rod protein FlgC [Magnetospirillum magneticum
           AMB-1]
 gi|82944555|dbj|BAE49419.1| Flagellar basal body rod protein [Magnetospirillum magneticum
           AMB-1]
          Length = 136

 Score = 49.1 bits (115), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 8/46 (17%), Positives = 19/46 (41%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G++   N N + EM  M    + + +   +I+ +   +   I  + 
Sbjct: 91  GYVLAPNVNPLIEMMDMREAQRSYEANMNVINASRSLLSRTIEMLR 136



 Score = 40.6 bits (93), Expect = 0.17,   Method: Composition-based stats.
 Identities = 16/110 (14%), Positives = 33/110 (30%), Gaps = 11/110 (10%)

Query: 1   MQ---TSFNIGLAAQLALEQRLSTVADNMSNTD----TV-G--FRTIKVKFS-EVVGAIK 49
           M     S    ++      QRL  +++N++N D    T  G  +R   + F  E+  A  
Sbjct: 1   MDELSKSTQTAISGMKVQSQRLRVISENLANADSLAQTPEGLPYRRKVMTFKNELDRATG 60

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
            ++ +     A   E+  +      +   +                    
Sbjct: 61  TNVVKVDKVRADSAEFQRRYDPKHPAADRDGYVLAPNVNPLIEMMDMREA 110


>gi|317153716|ref|YP_004121764.1| flagellar basal-body rod protein FlgC [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316943967|gb|ADU63018.1| flagellar basal-body rod protein FlgC [Desulfovibrio aespoeensis
           Aspo-2]
          Length = 145

 Score = 49.1 bits (115), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 23/43 (53%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   + N + EM  M++ T+ + +    I+  ++   +A++
Sbjct: 100 GYVYYPDINVVEEMTNMMNATRGYEANVQTIESVKQMFNKALQ 142



 Score = 39.5 bits (90), Expect = 0.45,   Method: Composition-based stats.
 Identities = 9/31 (29%), Positives = 16/31 (51%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32
           T+ +IG +   A    L+ ++ NM+N  T 
Sbjct: 4  MTALDIGASGLKAQRATLNVISMNMANMRTT 34


>gi|332798814|ref|YP_004460313.1| flagellar hook-associated protein FlgK [Tepidanaerobacter sp.
          Re1]
 gi|332696549|gb|AEE91006.1| flagellar hook-associated protein FlgK [Tepidanaerobacter sp.
          Re1]
          Length = 459

 Score = 49.1 bits (115), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 3/56 (5%)

Query: 1  MQTSFN---IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
          MQ+SF    I   A  A ++   TVA N+SN +T G+   +V       A     +
Sbjct: 1  MQSSFLGIEIAKTALFANQRAQQTVAHNVSNANTPGYSRQRVILEATHTAYGMGAN 56



 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 7/42 (16%), Positives = 19/42 (45%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            S+ +   EM +MI     +N+ + ++   ++ +   I  + 
Sbjct: 417 TSSVSLDEEMTKMIQYLHGYNAASRIVTTVDEMLDTIINRMG 458


>gi|322432998|ref|YP_004210247.1| flagellar basal-body rod protein FlgC [Acidobacterium sp. MP5ACTX9]
 gi|321165225|gb|ADW70929.1| flagellar basal-body rod protein FlgC [Acidobacterium sp. MP5ACTX9]
          Length = 148

 Score = 49.1 bits (115), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 11/65 (16%), Positives = 25/65 (38%)

Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
              P    E       K GF+     N + EM  ++  T+ +    + +   ++ + ++I
Sbjct: 84  TAAPVMRYEPGHPDADKDGFVAYPAINPVQEMVDLMGSTRAYQLNASAVSAAKQMIQQSI 143

Query: 239 RNIAS 243
             + S
Sbjct: 144 DILKS 148



 Score = 39.9 bits (91), Expect = 0.33,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 31/110 (28%), Gaps = 14/110 (12%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDT----VG--FRTIKVKFSEV--------VGAIK 49
              I  +A  A  QR   +A NM+N +T     G  F+  +V FS               
Sbjct: 6   MLQISGSALSAERQRSEVIAANMANAETTHTDTGGPFKRKEVVFSSASDSSFHLTFAKTG 65

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
               +    V   +                 D   +G   +   +P   +
Sbjct: 66  GLSGKTPGTVRISQIVDDTAAPVMRYEPGHPDADKDGFVAYPAINPVQEM 115


>gi|121596384|ref|YP_988280.1| flagellar basal body rod protein [Acidovorax sp. JS42]
 gi|120608464|gb|ABM44204.1| flagellar basal body rod protein [Acidovorax sp. JS42]
          Length = 101

 Score = 49.1 bits (115), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 20/49 (40%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK 49
          M T   I  +   A + RL + A N++N +T GFR   V          
Sbjct: 1  MTTLAAIAQSGLQAAQLRLDSSAHNVANLNTPGFRRQTVDQQAAPAPGG 49


>gi|312879581|ref|ZP_07739381.1| flagellar basal-body rod protein FlgC [Aminomonas paucivorans DSM
           12260]
 gi|310782872|gb|EFQ23270.1| flagellar basal-body rod protein FlgC [Aminomonas paucivorans DSM
           12260]
          Length = 139

 Score = 49.1 bits (115), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 8/47 (17%), Positives = 22/47 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           G++   N N + EM  M+  ++ + +   +++  +     A+  + S
Sbjct: 93  GYVAYPNVNVVREMADMLVASRAYEASVNVVETGKALWTSALEIMRS 139



 Score = 43.3 bits (100), Expect = 0.033,   Method: Composition-based stats.
 Identities = 10/83 (12%), Positives = 22/83 (26%), Gaps = 6/83 (7%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDIDQKI 56
           + ++  +A  A    + TV+ N++N +T     G  +      F E +           
Sbjct: 5  RNIDVAGSALTAHRLWMDTVSSNLANVNTTRTPSGGPYVRKVPIFQEKLMEAMKGAPSSS 64

Query: 57 SFVASGKEYLSKEVGSFISTGTE 79
              +                  
Sbjct: 65 GVRVAEIAKDPLPPRMVYQPDHP 87


>gi|119503650|ref|ZP_01625733.1| flagellar hook-associated protein [marine gamma proteobacterium
          HTCC2080]
 gi|119460712|gb|EAW41804.1| flagellar hook-associated protein [marine gamma proteobacterium
          HTCC2080]
          Length = 556

 Score = 49.1 bits (115), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 34/98 (34%), Gaps = 3/98 (3%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M  +  IG  A  AL++ +ST   N++N +T G+    V  S        DI        
Sbjct: 1  MANTLGIGTTALSALQRAISTTGQNIANVNTEGYSRQSVSLSARPAQ---DIGAGYLGSG 57

Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98
               + +    F++   +   A  G       +   +
Sbjct: 58 VQVTSIDRAYNQFLANDVQQRTASSGYYSLYANAAERV 95


>gi|46578731|ref|YP_009539.1| flagellar basal-body rod protein FlgC [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120603705|ref|YP_968105.1| flagellar basal-body rod protein FlgC [Desulfovibrio vulgaris DP4]
 gi|46448143|gb|AAS94798.1| flagellar basal-body rod protein FlgC [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120563934|gb|ABM29678.1| flagellar basal-body rod protein FlgC [Desulfovibrio vulgaris DP4]
 gi|311232603|gb|ADP85457.1| flagellar basal-body rod protein FlgC [Desulfovibrio vulgaris RCH1]
          Length = 145

 Score = 49.1 bits (115), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 22/44 (50%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           ++GF+   + N + EM  ++   + + +  T +D  +    +A+
Sbjct: 98  QQGFVSYPDINVVEEMANLMTAQRGYEANVTTVDTVKAMYSKAL 141



 Score = 39.1 bits (89), Expect = 0.49,   Method: Composition-based stats.
 Identities = 8/31 (25%), Positives = 17/31 (54%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32
           T+ +IG +A  A    ++ ++ N++N  T 
Sbjct: 4  MTALDIGASALTAERTNMNIISMNLANAKTT 34


>gi|325927872|ref|ZP_08189096.1| flagellar basal-body rod protein FlgB [Xanthomonas perforans
           91-118]
 gi|325541712|gb|EGD13230.1| flagellar basal-body rod protein FlgB [Xanthomonas perforans
           91-118]
          Length = 179

 Score = 49.1 bits (115), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 26/55 (47%)

Query: 11  AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65
           A    EQR+  +A N+SN DT G++   + F   + + + + D  +      K Y
Sbjct: 61  ALTLREQRMKLIASNLSNVDTPGYKAKDLNFEAALKSAQGEQDGGLLQTTDAKHY 115


>gi|167465319|ref|ZP_02330408.1| Flagellar basal body protein [Paenibacillus larvae subsp. larvae
          BRL-230010]
          Length = 136

 Score = 49.1 bits (115), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 26/80 (32%), Gaps = 7/80 (8%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M+ S         A   R   +A+N++N DT  F+   V F E++        + +    
Sbjct: 12 MERSL-------DASALRQRVIANNVANVDTPQFKRSDVLFEELLQNEITGSVKPLEGYR 64

Query: 61 SGKEYLSKEVGSFISTGTEL 80
          +   +      S        
Sbjct: 65 TDPRHFKIGQPSLPEGAQIS 84


>gi|238916744|ref|YP_002930261.1| flagellar basal-body rod protein FlgC [Eubacterium eligens ATCC
          27750]
 gi|238872104|gb|ACR71814.1| flagellar basal-body rod protein FlgC [Eubacterium eligens ATCC
          27750]
          Length = 164

 Score = 49.1 bits (115), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 10/32 (31%), Positives = 19/32 (59%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32
          M T+FN+  +   A + R   +++N++N DT 
Sbjct: 1  MFTAFNVSASGMTAQQLRTDVISENIANADTT 32



 Score = 48.3 bits (113), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 8/47 (17%), Positives = 23/47 (48%), Gaps = 1/47 (2%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           G++   N N++ EM  +I  ++ + +  +  + ++    + +  I S
Sbjct: 117 GYVTYPNVNTVQEMTDLIDASRSYEANISAFNASKSMATKGLS-IGS 162


>gi|56964843|ref|YP_176574.1| flagellar hook-associated protein 1 FlgK [Bacillus clausii KSM-K16]
 gi|56911086|dbj|BAD65613.1| flagellar hook-associated protein 1 FlgK [Bacillus clausii KSM-K16]
          Length = 528

 Score = 49.1 bits (115), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 6/41 (14%), Positives = 16/41 (39%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  +   EM  +I     +N+    +   ++ + + I  + 
Sbjct: 484 SGVSLDEEMTLLIQFQHAYNAAARTMTAMDEMLDQIINRLG 524



 Score = 39.9 bits (91), Expect = 0.31,   Method: Composition-based stats.
 Identities = 9/50 (18%), Positives = 19/50 (38%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          A    +  + TV +N++N  T G+   +V      G     +  + +   
Sbjct: 13 AVNTNQTAIQTVGNNVANAKTPGYTRQRVNLQATGGYPATGVWTQPAMNG 62


>gi|302339108|ref|YP_003804314.1| flagellar hook-associated protein FlgK [Spirochaeta smaragdinae DSM
           11293]
 gi|301636293|gb|ADK81720.1| flagellar hook-associated protein FlgK [Spirochaeta smaragdinae DSM
           11293]
          Length = 627

 Score = 48.7 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 6/40 (15%), Positives = 15/40 (37%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
            N   E+  MI     + + +  I   ++ +   I  + +
Sbjct: 588 VNLDEELANMIKFQHGYAAASRFITAVDEMLDVIINRMGA 627


>gi|154175384|ref|YP_001408368.1| flagellar hook-associated protein FlgK [Campylobacter curvus
          525.92]
 gi|112802604|gb|EAT99948.1| flagellar hook-associated protein FlgK [Campylobacter curvus
          525.92]
          Length = 623

 Score = 48.7 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 12/80 (15%), Positives = 31/80 (38%), Gaps = 2/80 (2%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE--VVGAIKNDIDQKISFVAS 61
          S N G++   A + ++ST  +N++N D+  +   +V  S    +  +   +         
Sbjct: 7  SLNTGVSGLNAAQTQISTTGNNIANADSAYYTRQRVVQSASPAMNTVPGGVGTGTQVDTV 66

Query: 62 GKEYLSKEVGSFISTGTELD 81
           + +         +  + L+
Sbjct: 67 KRIHDEFTYSRLKTASSNLE 86



 Score = 43.3 bits (100), Expect = 0.028,   Method: Composition-based stats.
 Identities = 13/130 (10%), Positives = 35/130 (26%), Gaps = 7/130 (5%)

Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169
            D + + A  K  V +       +  +         G    + + I     Y        
Sbjct: 498 QDHTKIRAYSKPVVGNNEVANKMVQLQYTKQTFYSNGTALDRDETIEGYYRYFTTDIASD 557

Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
               N+    N       +    ++       S  ++  E+  +I     + +   +I  
Sbjct: 558 TEANNTTHDTNTALQKTAEEEFQSI-------SGVDTNEELTNLIRFQASYGAAAKIITT 610

Query: 230 NEKSMLEAIR 239
            ++ +   + 
Sbjct: 611 VDQMLDTLLT 620


>gi|296133052|ref|YP_003640299.1| flagellar basal-body rod protein FlgB [Thermincola sp. JR]
 gi|296031630|gb|ADG82398.1| flagellar basal-body rod protein FlgB [Thermincola potens JR]
          Length = 138

 Score = 48.7 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 23/54 (42%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
          A  A   R   +A+NM+N DT G++ + V F E +        +     +  + 
Sbjct: 17 ALDAASMRNEAIANNMANVDTPGYKRVDVAFEEELKKAMAANGRLQGLTSDPRH 70


>gi|15644116|ref|NP_229165.1| flagellar basal-body rod protein FlgB [Thermotoga maritima MSB8]
 gi|148270548|ref|YP_001245008.1| flagellar basal-body rod protein FlgB [Thermotoga petrophila
          RKU-1]
 gi|4981924|gb|AAD36434.1|AE001790_6 flagellar basal-body rod protein FlgB [Thermotoga maritima MSB8]
 gi|147736092|gb|ABQ47432.1| flagellar basal-body rod protein FlgB [Thermotoga petrophila
          RKU-1]
          Length = 127

 Score = 48.7 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 21/50 (42%), Gaps = 1/50 (2%)

Query: 1  MQTS-FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK 49
          M  + F     A      R +  + N++N  T G++   V F E++   +
Sbjct: 1  MFNTNFYTLKQAMDVALLRQNVHSLNIANVSTPGYKRKYVAFEELLKESE 50


>gi|255263716|ref|ZP_05343058.1| flagellar hook-associated protein FlgK [Thalassiobium sp. R2A62]
 gi|255106051|gb|EET48725.1| flagellar hook-associated protein FlgK [Thalassiobium sp. R2A62]
          Length = 479

 Score = 48.7 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
            ++  EM  ++ + Q +++   +I   ++ M   +R + S
Sbjct: 441 VDTDQEMQNLLLIEQAYSANAKVIQTVDEMMQTLLR-LGS 479



 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 13/89 (14%), Positives = 33/89 (37%), Gaps = 3/89 (3%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
          +S +  L+   A  +    V+ N++N+ T G+   ++   ++   +   +   +      
Sbjct: 5  SSLSNALSGLTAASRAAEIVSSNLANSLTDGYARRRL---DLSSQLTGGVGGGVQIDGVA 61

Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFA 91
          +      +     +   L FA    A+F 
Sbjct: 62 RLVDRGVLADRRISDANLGFADTSVAFFR 90


>gi|255654319|ref|ZP_05399728.1| putative flagellar hook-associated protein [Clostridium difficile
          QCD-23m63]
          Length = 125

 Score = 48.7 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 33/77 (42%), Gaps = 4/77 (5%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE----VVGAIKNDIDQKISF 58
          +  N   +   + ++ + T++ N+SN DT G+   + +F+      + ++ N I +    
Sbjct: 6  SILNTANSGMNSHQKAIQTISHNISNLDTEGYSRQRTEFATNSPMYMPSLSNSIGRGQLG 65

Query: 59 VASGKEYLSKEVGSFIS 75
                 +++   SF  
Sbjct: 66 TGVHVTDVTRARNSFYD 82


>gi|297544025|ref|YP_003676327.1| flagellar hook-associated protein FlgK [Thermoanaerobacter
          mathranii subsp. mathranii str. A3]
 gi|296841800|gb|ADH60316.1| flagellar hook-associated protein FlgK [Thermoanaerobacter
          mathranii subsp. mathranii str. A3]
          Length = 480

 Score = 48.7 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 7/54 (12%), Positives = 16/54 (29%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56
              I        ++ L     N++N +T G+    V    +       +  + 
Sbjct: 5  QGLEIAKTGLFVSQKALDVTGHNIANANTPGYTRQVVDMVSIAPPTTFGMYDQW 58



 Score = 48.3 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 6/41 (14%), Positives = 16/41 (39%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  +   EM  M+   + + +   +I   ++ +   I  + 
Sbjct: 436 SGVSLDEEMTNMLKYQKAYAASARIITAIDELLDTLINKMG 476


>gi|325288776|ref|YP_004264957.1| flagellar basal-body rod protein FlgC [Syntrophobotulus glycolicus
           DSM 8271]
 gi|324964177|gb|ADY54956.1| flagellar basal-body rod protein FlgC [Syntrophobotulus glycolicus
           DSM 8271]
          Length = 160

 Score = 48.7 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 21/42 (50%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N N + EM  M+  ++ + +  T  + ++    +A+
Sbjct: 114 GYVRHPNVNIVQEMIDMLSASRSYEANVTAFNASKAIAAKAL 155



 Score = 45.2 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 20/53 (37%), Gaps = 12/53 (22%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV--------G----FRTIKVKFSE 43
          +  +I  +   A   R+  ++ N++N +T         G    +R     FS 
Sbjct: 5  SGMDISASGLTAQRLRMDLISSNIANMNTNHTEATTAAGNPIPYRRQMAVFST 57


>gi|269976263|ref|ZP_06183259.1| flagellar basal-body rod protein FlgB [Mobiluncus mulieris 28-1]
 gi|307699942|ref|ZP_07636993.1| putative flagellar basal-body rod protein FlgB [Mobiluncus
          mulieris FB024-16]
 gi|269935592|gb|EEZ92130.1| flagellar basal-body rod protein FlgB [Mobiluncus mulieris 28-1]
 gi|307614980|gb|EFN94198.1| putative flagellar basal-body rod protein FlgB [Mobiluncus
          mulieris FB024-16]
          Length = 115

 Score = 48.7 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 31/76 (40%), Gaps = 2/76 (2%)

Query: 1  MQTSF-NIGL-AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
          M  S   I +  A   L  R   +ADN++N  T GF   KV+F + +       + + + 
Sbjct: 1  MFDSINYIAMRTALDGLSMRQRVIADNIANIQTPGFLAGKVRFEDELARATRFGNPQSAH 60

Query: 59 VASGKEYLSKEVGSFI 74
          +A+ +      +    
Sbjct: 61 IATARSLEPTRIDGNN 76


>gi|260438810|ref|ZP_05792626.1| flagellar basal-body rod protein FlgC [Butyrivibrio crossotus DSM
           2876]
 gi|292808799|gb|EFF68004.1| flagellar basal-body rod protein FlgC [Butyrivibrio crossotus DSM
           2876]
          Length = 145

 Score = 48.7 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 21/42 (50%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G+++  N N + EM  +I  T+ + +  T  D ++    + +
Sbjct: 100 GYVKYPNVNIVNEMTDLIDATRSYEANATAFDASKSMASKGL 141



 Score = 46.0 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 7/30 (23%), Positives = 14/30 (46%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV 32
          +  NI  +   A   R   ++ N++N +T 
Sbjct: 5  SGMNIAASGMTAQRLRTDIISGNIANANTT 34


>gi|91792670|ref|YP_562321.1| flagellar hook-associated protein [Shewanella denitrificans
          OS217]
 gi|91714672|gb|ABE54598.1| Flagellar hook-associated protein [Shewanella denitrificans
          OS217]
          Length = 639

 Score = 48.7 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 10/79 (12%), Positives = 25/79 (31%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
              NI     LA + +L   ++N++N +T G+     +       +            S
Sbjct: 3  INLLNIARTGVLASQAQLGVTSNNIANANTEGYHRQVAQQGTTDPQMLGGNYYGTGTYVS 62

Query: 62 GKEYLSKEVGSFISTGTEL 80
            + +  +  +      + 
Sbjct: 63 DVKRIYNDYAARELRIGQT 81



 Score = 37.2 bits (84), Expect = 1.9,   Method: Composition-based stats.
 Identities = 4/41 (9%), Positives = 14/41 (34%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E   ++   Q + +   ++   ++       ++ 
Sbjct: 599 SGVNLDEEAANLLKFQQAYQASARIMTTAQQIFDTLFNSVR 639


>gi|310659650|ref|YP_003937371.1| flagellar hook-associated protein 1 [Clostridium sticklandii DSM
           519]
 gi|308826428|emb|CBH22466.1| flagellar hook-associated protein 1 [Clostridium sticklandii]
          Length = 518

 Score = 48.7 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 24/209 (11%), Positives = 52/209 (24%), Gaps = 4/209 (1%)

Query: 38  KVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG 97
           +++  +            + F++      ++ +      G  L+ A              
Sbjct: 306 QLQQRDGYKDETKGAPYYVRFLSEFANTFAQALNDIHDDGYSLNGAAASGLPLFTTKNGS 365

Query: 98  IILTRDGRFKVT----DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK 153
                    KV     DD + +S        D     I +       +   +      G 
Sbjct: 366 TNFISASELKVNQALLDDPTKLSLGLGDGAPDNNKNAIAMLNLRSKKDFEIRLTYDTSGA 425

Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQM 213
            I        D+ +  +                +      V    L  S  +   EM  M
Sbjct: 426 QIVLGEGTPEDVLKTMIASLGVDAQEAKRMFNNQQYLTEEVDSFRLSVSGVSQDEEMSNM 485

Query: 214 IHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           I     +N+   +I   ++ +   I  + 
Sbjct: 486 IKFQHAYNAAARMITTVDEMIDVIINRMG 514



 Score = 45.2 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 19/40 (47%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
            +I  +   A ++ L     N+SNT+T G+   ++  S 
Sbjct: 7  GLSIASSGLFAAQRALDITGHNISNTNTRGYTRQRLNQSA 46


>gi|254292929|ref|YP_003058952.1| flagellar basal-body rod protein FlgC [Hirschia baltica ATCC 49814]
 gi|254041460|gb|ACT58255.1| flagellar basal-body rod protein FlgC [Hirschia baltica ATCC 49814]
          Length = 138

 Score = 48.7 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 8/47 (17%), Positives = 24/47 (51%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           G ++ SN +++ EM  M    + + +   +++ +   +L A+  + +
Sbjct: 92  GMVKYSNVSALVEMTDMREAQRAYEANLNVVEASRSMLLAAVDILKA 138



 Score = 43.7 bits (101), Expect = 0.024,   Method: Composition-based stats.
 Identities = 10/82 (12%), Positives = 27/82 (32%), Gaps = 7/82 (8%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQ 54
           ++ +   +   A   R+   A+N++N ++ G       ++     F   +         
Sbjct: 6  MSAMSSAASGLRAQTVRIRVSAENLANANSTGDTPGADPYQRKVPVFKNYLDRESGAERV 65

Query: 55 KISFVASGKEYLSKEVGSFIST 76
          K+S V +     + +       
Sbjct: 66 KVSGVHNDTAPFTVKFDPTHPA 87


>gi|328475671|gb|EGF46420.1| flagellar basal body rod protein FlgB [Listeria monocytogenes
          220]
          Length = 139

 Score = 48.7 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 19/45 (42%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56
             L+     V++N++N +T  F+  +  F E  G+      Q  
Sbjct: 12 LNYLQTANQVVSNNIANANTPNFKASEASFEESFGSSLRASGQNS 56


>gi|330808201|ref|YP_004352663.1| flagellar hook-associated protein [Pseudomonas brassicacearum
          subsp. brassicacearum NFM421]
 gi|327376309|gb|AEA67659.1| flagellar hook-associated protein [Pseudomonas brassicacearum
          subsp. brassicacearum NFM421]
          Length = 688

 Score = 48.7 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 20/39 (51%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
           +  NIG++   A +  L T  +N++N DT G+   +  
Sbjct: 1  MSLLNIGMSGLSASQTALVTTGNNIANVDTAGYSRQQTV 39


>gi|85712251|ref|ZP_01043302.1| Flagellar basal body protein [Idiomarina baltica OS145]
 gi|85693878|gb|EAQ31825.1| Flagellar basal body protein [Idiomarina baltica OS145]
          Length = 134

 Score = 48.7 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 23/79 (29%), Gaps = 8/79 (10%)

Query: 1  MQTSF----NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56
          M                     L  +A+N++N DT G++   + F + +   +  I    
Sbjct: 5  MDKLLGIQQYTL--GIRTQRAEL--IANNIANADTPGYKAKGLDFQQALAQAQRGIQSHS 60

Query: 57 SFVASGKEYLSKEVGSFIS 75
                K +  +       
Sbjct: 61 LARTHEKHFSVEISPQGQE 79


>gi|197104391|ref|YP_002129768.1| flagellar basal-body rod protein FlgC [Phenylobacterium zucineum
           HLK1]
 gi|196477811|gb|ACG77339.1| flagellar basal-body rod protein FlgC [Phenylobacterium zucineum
           HLK1]
          Length = 138

 Score = 48.7 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 14/111 (12%), Positives = 28/111 (25%), Gaps = 12/111 (10%)

Query: 1   MQTSFN-----IGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAI 48
           M  S +     I  +A  A + R+  +A+N++N ++         +R     F     A 
Sbjct: 1   MPRSLSGVAQAIAASALRAQQARMRIIAENLANANSTAKVPGGDPYRRQAPVFEPTRVAG 60

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
                +          +  +      S        L               
Sbjct: 61  AAQGVRMSRVEPDQSAFRMEYDPGHPSADDRGYVKLPNVNSLVEAMDMREA 111



 Score = 41.0 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 7/42 (16%), Positives = 17/42 (40%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G+++  N NS+ E   M    + + +   +I+         +
Sbjct: 92  GYVKLPNVNSLVEAMDMREAQRAYEANLNVIETARAMETRTL 133


>gi|319403959|emb|CBI77547.1| Flagellar basal-body rod protein flgC [Bartonella rochalimae ATCC
          BAA-1498]
          Length = 138

 Score = 48.7 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 11/75 (14%), Positives = 26/75 (34%), Gaps = 7/75 (9%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQKISFV 59
          I      A   RL  +A+N++N ++ G       ++   V F   +    +     ++ +
Sbjct: 11 IATTGLSAQSTRLRVIAENLANANSTGKSPGARPYQRKTVSFEATLNPYLDAQGVHVTRI 70

Query: 60 ASGKEYLSKEVGSFI 74
          ++ K           
Sbjct: 71 STDKAPFIMRYEPGH 85



 Score = 46.0 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 20/42 (47%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G+++  N NS+ EM  M    + + +   +I +    + + I
Sbjct: 92  GYVKYPNVNSIIEMADMREANRSYEANLQVIRQARDLISQTI 133


>gi|328543166|ref|YP_004303275.1| flagellar basal-body rod protein C [polymorphum gilvum SL003B-26A1]
 gi|326412912|gb|ADZ69975.1| Flagellar basal-body rod protein C [Polymorphum gilvum SL003B-26A1]
          Length = 136

 Score = 48.7 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 13/109 (11%), Positives = 32/109 (29%), Gaps = 10/109 (9%)

Query: 1   MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGA-IKN 50
           M    S  I  +   A   R+  +A+N++N D+ G       +R     F       ++ 
Sbjct: 1   MDLVKSLFISASGLKAQNGRIRVIAENLANADSTGRTPDEDPYRRKIPTFKNRFDRDLQA 60

Query: 51  DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
           ++ +         E+ ++      +     +  +               
Sbjct: 61  ELVELGKLAEDRSEFPTRYEPGHPAADANGNVRVPNVNSLVETVDMREA 109



 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/74 (14%), Positives = 24/74 (32%), Gaps = 6/74 (8%)

Query: 169 FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228
                +   +   P  P  D +      G +   N NS+ E   M    + + +   +I+
Sbjct: 68  LAEDRSEFPTRYEPGHPAADAN------GNVRVPNVNSLVETVDMREAQRSYEANLNVIE 121

Query: 229 ENEKSMLEAIRNIA 242
              + +   I  + 
Sbjct: 122 STRRMLQRTIDILR 135


>gi|157961177|ref|YP_001501211.1| flagellar hook-associated protein FlgK [Shewanella pealeana ATCC
          700345]
 gi|157846177|gb|ABV86676.1| flagellar hook-associated protein FlgK [Shewanella pealeana ATCC
          700345]
          Length = 640

 Score = 48.7 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 22/47 (46%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51
           NI     LA + +L+  ++N++N +T G+    V  S +      +
Sbjct: 6  MNIARTGVLASQSQLAITSNNIANANTAGYNRQVVSQSALDSQRMGN 52



 Score = 36.0 bits (81), Expect = 4.2,   Method: Composition-based stats.
 Identities = 4/41 (9%), Positives = 13/41 (31%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E   ++   Q + +   ++    +       ++ 
Sbjct: 600 SGVNLDEEAANLMRFQQSYQASARIMTTANEIFNTLFSSLR 640


>gi|254461659|ref|ZP_05075075.1| FlgK flagellar hook-associated protein 1, putative
          [Rhodobacterales bacterium HTCC2083]
 gi|206678248|gb|EDZ42735.1| FlgK flagellar hook-associated protein 1, putative
          [Rhodobacteraceae bacterium HTCC2083]
          Length = 1431

 Score = 48.7 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 23/44 (52%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44
          M +  +IG +A  A  + L+    N+ N +T G+R  +   +EV
Sbjct: 1  MASLLDIGRSAVSAQREALNVTGQNIVNANTEGYRRREASLTEV 44


>gi|319406974|emb|CBI80611.1| Flagellar basal-body rod protein flgC [Bartonella sp. 1-1C]
          Length = 138

 Score = 48.7 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 11/75 (14%), Positives = 26/75 (34%), Gaps = 7/75 (9%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQKISFV 59
          I      A   RL  +A+N++N ++ G       ++   V F   +    +     ++ +
Sbjct: 11 IATTGLSAQSTRLRVIAENLANANSTGKSPGARPYQRKTVSFEATLNPYIDAQGVHVTRI 70

Query: 60 ASGKEYLSKEVGSFI 74
          ++ K           
Sbjct: 71 STDKAPFIMRYEPGH 85



 Score = 46.0 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 20/42 (47%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G+++  N NS+ EM  M    + + +   +I +    + + I
Sbjct: 92  GYVKYPNVNSIIEMADMREANRSYEANLQVIRQARDLISQTI 133


>gi|146277702|ref|YP_001167861.1| flagellar hook-associated protein FlgK [Rhodobacter sphaeroides
          ATCC 17025]
 gi|145555943|gb|ABP70556.1| flagellar hook-associated protein FlgK [Rhodobacter sphaeroides
          ATCC 17025]
          Length = 1365

 Score = 48.7 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 31/79 (39%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           +  +I  +  L+    LS  A+N++N +T G+   +V  ++V G   +      S    
Sbjct: 1  MSILDIARSGILSYRSALSVTAENIANVNTEGYVRREVVLAQVPGGQVSPTSAAGSGQGV 60

Query: 62 GKEYLSKEVGSFISTGTEL 80
            E + +     ++     
Sbjct: 61 RVEDVRRAFDGLVAQRLRT 79


>gi|311694358|gb|ADP97231.1| fFlagellar basal-body rod protein FlgB [marine bacterium HP15]
          Length = 139

 Score = 48.7 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 15/103 (14%), Positives = 31/103 (30%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
            ++  I   A  A  +R   +A+N++N DT GF+   + F  ++   +  +         
Sbjct: 13  DSALGIHQHAVEARVKRAEVLANNLANADTPGFKARDLDFQAMMQKAQEQVSGFQMAKTH 72

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDG 104
                +    S       +      D              R+ 
Sbjct: 73  DAHMDTSPSASESDLMYRVPHQPSVDGNTVDAQQEQTRFMRNA 115


>gi|309779453|ref|ZP_07674214.1| flagellar hook-associated protein FlgK [Ralstonia sp. 5_7_47FAA]
 gi|308921694|gb|EFP67330.1| flagellar hook-associated protein FlgK [Ralstonia sp. 5_7_47FAA]
          Length = 645

 Score = 48.7 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 14/83 (16%), Positives = 27/83 (32%), Gaps = 2/83 (2%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE--VVGAIKNDIDQKISFVA 60
          +  NIG +     +  L    +N++N  T G+   +   +E   + A    + Q  +   
Sbjct: 4  SLLNIGASGLRVADINLQVTGNNIANASTPGYSRQEAVQTENIPLYAGVGYLGQGANVTT 63

Query: 61 SGKEYLSKEVGSFISTGTELDFA 83
            + Y         S       A
Sbjct: 64 VKRIYDQFLTAQVQSGQASTSAA 86


>gi|118588700|ref|ZP_01546108.1| flagellar basal-body rod protein C [Stappia aggregata IAM 12614]
 gi|118438686|gb|EAV45319.1| flagellar basal-body rod protein C [Stappia aggregata IAM 12614]
          Length = 136

 Score = 48.7 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 20/47 (42%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           G++   N N++ E   M    + + +   +ID   K +   I  + +
Sbjct: 90  GYVLQPNVNTLIETTDMREAQRSYEANLNVIDSTRKMLQRTIDILRA 136



 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/59 (16%), Positives = 19/59 (32%), Gaps = 9/59 (15%)

Query: 1  MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKN 50
          M    S  I  +   A   R+  +A+N++N ++         +R     F         
Sbjct: 1  MDLIKSLFISASGLRAQNGRMRIIAENIANANSTAKTPEELPYRRKIPTFKSHFDREMG 59


>gi|192360466|ref|YP_001982403.1| flagellar basal-body rod protein FlgB [Cellvibrio japonicus
          Ueda107]
 gi|190686631|gb|ACE84309.1| flagellar basal-body rod protein FlgB [Cellvibrio japonicus
          Ueda107]
          Length = 133

 Score = 48.7 bits (114), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 23/48 (47%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK 49
            +  I  +A     +R S +A+N++N DT  ++   V F + +G   
Sbjct: 6  DKALGIHESALKFRSERASVLANNLANIDTPNYKARDVDFKQALGQQM 53


>gi|226327737|ref|ZP_03803255.1| hypothetical protein PROPEN_01610 [Proteus penneri ATCC 35198]
 gi|225203441|gb|EEG85795.1| hypothetical protein PROPEN_01610 [Proteus penneri ATCC 35198]
          Length = 463

 Score = 48.7 bits (114), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 1  MQTSF-NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M  S  N  ++   A +  +STV++N++N +   +      F+E  G +  + 
Sbjct: 1  MSNSLINTAMSGLNAAQAAMSTVSNNIANQNVKWYNRQMTVFNENSGTMTGNG 53


>gi|313672183|ref|YP_004050294.1| flagellar hook-associated protein flgk [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312938939|gb|ADR18131.1| flagellar hook-associated protein FlgK [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 582

 Score = 48.7 bits (114), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 5/36 (13%), Positives = 13/36 (36%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +   E   MI   + + +    I   ++ + + I 
Sbjct: 540 VSMDEEYTNMIKFQKAYEANARFITAVDQMIDKLIN 575



 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 6/35 (17%), Positives = 16/35 (45%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39
           + G++     +  +     N++N +T G+   +V
Sbjct: 8  LHTGVSGLYVAQSGIDVTGHNIANLNTEGYSRQRV 42


>gi|296330251|ref|ZP_06872732.1| flagellar hook-associated protein FlgK [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305676144|ref|YP_003867816.1| flagellar hook-filament junction [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296152519|gb|EFG93387.1| flagellar hook-associated protein FlgK [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305414388|gb|ADM39507.1| flagellar hook-filament junction [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 507

 Score = 48.7 bits (114), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 7/42 (16%), Positives = 17/42 (40%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            S  +   EM  MI     +N+   ++   ++ + + I  + 
Sbjct: 462 MSAVSLDEEMTNMIQFQHAYNAAARMVTLQDEILDKVINGMG 503



 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 35/92 (38%), Gaps = 2/92 (2%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS--EVVGAIKNDIDQKISFVAS 61
                 A  A +  LST A+N++N +T G+   +V     +   A+  + ++    + +
Sbjct: 7  GLETARRALSAQQAALSTTANNVANANTDGYTRQRVSLEATDYFPAVSKNAEKTAGQMGT 66

Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALE 93
          G +  S E    I    +         ++  +
Sbjct: 67 GVQGKSVERIRDIFLDYQYRLQNNSAGYYDTK 98


>gi|94969957|ref|YP_592005.1| flagellar hook-associated protein [Candidatus Koribacter
          versatilis Ellin345]
 gi|94552007|gb|ABF41931.1| Flagellar hook-associated protein [Candidatus Koribacter
          versatilis Ellin345]
          Length = 458

 Score = 48.7 bits (114), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 23/55 (41%), Gaps = 1/55 (1%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFV 59
           +I   A LA +  +    +N++N +T G+      FS  V  + +      + V
Sbjct: 8  LSIATRAMLAEQGAMQATTNNIANVNTPGYSRQIPIFSA-VDPVVSGSTTYGNGV 61



 Score = 36.8 bits (83), Expect = 2.4,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 18/44 (40%), Gaps = 2/44 (4%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           +RG L  S  +   E   ++   + F +   L+   ++ M   I
Sbjct: 411 QRGAL--SGVSLDEETANLLQFQRGFEAAAHLVSVVDEMMQTVI 452


>gi|310641540|ref|YP_003946298.1| flagellar basal-body rod protein flgb [Paenibacillus polymyxa
          SC2]
 gi|309246490|gb|ADO56057.1| Flagellar basal-body rod protein FlgB [Paenibacillus polymyxa
          SC2]
          Length = 135

 Score = 48.7 bits (114), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 24/58 (41%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLS 67
          A   A   R   +ADN+SN DT  F+  +V F E++    +     +    +   +  
Sbjct: 14 AGVQAANTRQRVMADNISNADTPYFKRSEVSFEELLQQQMDGDVTPLRGKVTNSRHFQ 71


>gi|259908814|ref|YP_002649170.1| flagellar basal body rod protein FlgC [Erwinia pyrifoliae Ep1/96]
 gi|224964436|emb|CAX55945.1| Cell-proximal portion of basal-body rod [Erwinia pyrifoliae Ep1/96]
 gi|283478796|emb|CAY74712.1| Flagellar basal-body rod protein flgC [Erwinia pyrifoliae DSM
           12163]
 gi|310767288|gb|ADP12238.1| flagellar basal body rod protein FlgC [Erwinia sp. Ejp617]
          Length = 134

 Score = 48.7 bits (114), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 11/92 (11%), Positives = 33/92 (35%)

Query: 148 ISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSM 207
                K +      +     G VR       P       E  + +   RG+++  N + +
Sbjct: 40  QPYVAKQVVFQTNAAPGSPTGGVRVAEVINDPTPAKLVYEPGNPMADARGYIKMPNVDVV 99

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            E    +  ++ + +   +++  ++ M++ + 
Sbjct: 100 AETVNTLSASRSYQANVEVLNTVKQMMMKTLT 131



 Score = 34.8 bits (78), Expect = 9.3,   Method: Composition-based stats.
 Identities = 12/30 (40%), Positives = 18/30 (60%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV 32
            F+I  +A  A  QRL+  A N++N D+V
Sbjct: 5  RIFDIAGSAMAAQSQRLNVSASNLANADSV 34


>gi|167623367|ref|YP_001673661.1| flagellar hook-associated protein FlgK [Shewanella halifaxensis
          HAW-EB4]
 gi|167353389|gb|ABZ76002.1| flagellar hook-associated protein FlgK [Shewanella halifaxensis
          HAW-EB4]
          Length = 639

 Score = 48.7 bits (114), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 22/47 (46%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51
           NI     LA + +L+  ++N++N +T G+    V  S +      +
Sbjct: 6  MNIARTGVLASQSQLAITSNNIANANTAGYNRQVVSQSALDSQRMGN 52



 Score = 36.0 bits (81), Expect = 4.4,   Method: Composition-based stats.
 Identities = 4/41 (9%), Positives = 13/41 (31%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E   ++   Q + +   ++    +       ++ 
Sbjct: 599 SGVNLDEEAANLMRFQQSYQASARIMTTANEIFNTLFSSLR 639


>gi|23092312|gb|AAN08637.1| FlgB [Aeromonas hydrophila]
          Length = 132

 Score = 48.7 bits (114), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 14/99 (14%), Positives = 34/99 (34%)

Query: 11  AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
           A     +R   ++ N++N DT GF+   + FS+ +   ++     ++  +     L  + 
Sbjct: 15  ALSVRSKRAEVLSSNIANADTPGFKARDINFSQALEEAQHQQGFGLATTSEKHFALQSDA 74

Query: 71  GSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109
                    L           ++  R   L     ++ +
Sbjct: 75  PGLTQYRNPLQPDTGDGNTVDVQQERSEFLRNSLEYQTS 113


>gi|304397202|ref|ZP_07379081.1| flagellar basal-body rod protein FlgC [Pantoea sp. aB]
 gi|304355351|gb|EFM19719.1| flagellar basal-body rod protein FlgC [Pantoea sp. aB]
          Length = 134

 Score = 48.3 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 4/43 (9%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G+++  N + + E    +  ++ + +   +++  +  M++ + 
Sbjct: 89  GYVKMPNVDVVSESVNTMSASRSYQANVEVLNTVKSMMMKTLT 131



 Score = 36.4 bits (82), Expect = 3.4,   Method: Composition-based stats.
 Identities = 14/105 (13%), Positives = 26/105 (24%), Gaps = 7/105 (6%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS-EVVGAIKNDIDQ 54
              F+I  +A  A  QRL+  A N++N     G     +   +V F  +          +
Sbjct: 4   LNIFDIAGSAMTAQSQRLNVSASNLANADSVTGPDGKPYVAKQVVFQTDAAPGSATGGVK 63

Query: 55  KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
               V                   +    +      +        
Sbjct: 64  VAKIVDDPTPAKLVYDPGNPMADAKGYVKMPNVDVVSESVNTMSA 108


>gi|148380622|ref|YP_001255163.1| flagellar basal-body rod protein FlgC [Clostridium botulinum A str.
           ATCC 3502]
 gi|153931376|ref|YP_001384908.1| flagellar basal body rod protein FlgC [Clostridium botulinum A str.
           ATCC 19397]
 gi|153937867|ref|YP_001388377.1| flagellar basal body rod protein FlgC [Clostridium botulinum A str.
           Hall]
 gi|148290106|emb|CAL84225.1| flagellar basal-body rod protein [Clostridium botulinum A str. ATCC
           3502]
 gi|152927420|gb|ABS32920.1| flagellar basal-body rod protein FlgC [Clostridium botulinum A str.
           ATCC 19397]
 gi|152933781|gb|ABS39280.1| flagellar basal-body rod protein FlgC [Clostridium botulinum A str.
           Hall]
          Length = 144

 Score = 48.3 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 21/42 (50%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N N + EM  M+   + + +  T+++  +    +A+
Sbjct: 99  GYVSMPNVNVLNEMADMMASVRTYEANVTVMNAEKSMFGKAL 140



 Score = 42.5 bits (98), Expect = 0.050,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 20/50 (40%), Gaps = 9/50 (18%)

Query: 1  MQTSFNI---GLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKF 41
          M  +F+      +   A   R+ T+A N+SN  T     G  ++     F
Sbjct: 1  MIKAFDTMRISASGLSAERLRMDTIASNISNATTTRTENGGPYKRKIAVF 50


>gi|321313088|ref|YP_004205375.1| flagellar hook-associated protein FlgK [Bacillus subtilis BSn5]
 gi|320019362|gb|ADV94348.1| flagellar hook-associated protein FlgK [Bacillus subtilis BSn5]
          Length = 507

 Score = 48.3 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 7/42 (16%), Positives = 17/42 (40%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            S  +   EM  MI     +N+   ++   ++ + + I  + 
Sbjct: 462 MSAVSLDEEMTNMIQFQHAYNAAARMVTLQDELLDKVINGMG 503



 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 35/92 (38%), Gaps = 2/92 (2%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS--EVVGAIKNDIDQKISFVAS 61
                 A  A +  LST A+N++N +T G+   +V     +   A+  + ++    + +
Sbjct: 7  GLETARRALSAQQAALSTTANNVANANTDGYTRQRVSLEATDYFPAVSKNAEKTAGQMGT 66

Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALE 93
          G +  S E    I    +         ++  +
Sbjct: 67 GVQGKSVERIRDIFLDYQYRLQNNSAGYYDTK 98


>gi|289577712|ref|YP_003476339.1| flagellar hook-associated protein FlgK [Thermoanaerobacter
          italicus Ab9]
 gi|289527425|gb|ADD01777.1| flagellar hook-associated protein FlgK [Thermoanaerobacter
          italicus Ab9]
          Length = 480

 Score = 48.3 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 7/54 (12%), Positives = 16/54 (29%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56
              I        ++ L     N++N +T G+    V    +       +  + 
Sbjct: 5  QGLEIAKTGLFVSQKALDVTGHNIANANTPGYTRQVVDMVSIAPPTTFGMYDQW 58



 Score = 48.3 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 6/41 (14%), Positives = 16/41 (39%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  +   EM  M+   + + +   +I   ++ +   I  + 
Sbjct: 436 SGVSLDEEMTNMLKYQKSYAASARMITAIDELLDTLINKMG 476


>gi|85058009|ref|YP_453711.1| flagellar basal body rod protein FlgC [Sodalis glossinidius str.
           'morsitans']
 gi|84778529|dbj|BAE73306.1| flagellar basal-body rod protein FlgC [Sodalis glossinidius str.
           'morsitans']
          Length = 134

 Score = 48.3 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 7/42 (16%), Positives = 20/42 (47%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N N + EM   +  ++ + +   +I+     M++ +
Sbjct: 89  GYIRMPNVNRVAEMVNTLSASRSYQANVEVINSARSMMMKTL 130



 Score = 36.8 bits (83), Expect = 2.9,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 32/94 (34%), Gaps = 8/94 (8%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS--EVVGAIKNDIDQ 54
          + F+I  +A +A  QRL+  A NM+N     G     +R  +V F     +G     +  
Sbjct: 5  SIFDISGSALMAQSQRLNVSASNMANADSVTGPDGEPYRAKQVVFQLDAALGQPVGGVRV 64

Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEGDA 88
                     L  + G  ++           + 
Sbjct: 65 SQVVEDPAPWRLVYDPGHPLANDRGYIRMPNVNR 98


>gi|168180911|ref|ZP_02615575.1| flagellar basal-body rod protein FlgC [Clostridium botulinum NCTC
           2916]
 gi|182668190|gb|EDT80169.1| flagellar basal-body rod protein FlgC [Clostridium botulinum NCTC
           2916]
          Length = 144

 Score = 48.3 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 21/42 (50%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N N + EM  M+   + + +  T+++  +    +A+
Sbjct: 99  GYVSMPNVNVLNEMADMMASVRTYEANVTVMNAEKSMFGKAL 140



 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 20/50 (40%), Gaps = 9/50 (18%)

Query: 1  MQTSFNI---GLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKF 41
          M  +F+      +   A   R+ T+A N++N  T     G  ++     F
Sbjct: 1  MIKAFDTMRISASGLSAERLRMDTIASNIANATTTRTENGGPYKRKIAVF 50


>gi|291486094|dbj|BAI87169.1| flagellar hook-associated protein FlgK [Bacillus subtilis subsp.
           natto BEST195]
          Length = 507

 Score = 48.3 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 7/42 (16%), Positives = 17/42 (40%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            S  +   EM  MI     +N+   ++   ++ + + I  + 
Sbjct: 462 MSAVSLDEEMTNMIQFQHAYNAAARMVTLQDELLDKVINGMG 503



 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 35/92 (38%), Gaps = 2/92 (2%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS--EVVGAIKNDIDQKISFVAS 61
                 A  A +  LST A+N++N +T G+   +V     +   A+  + ++    + +
Sbjct: 7  GLETARRALSAQQAALSTTANNVANANTDGYTRQRVSLEATDYFPAVSKNAEKTAGQMGT 66

Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALE 93
          G +  S E    I    +         ++  +
Sbjct: 67 GVQGKSVERIRDIFLDYQYRLQNNSAGYYDTK 98


>gi|227871683|ref|ZP_03990096.1| flagellar hook-associated protein FlgK [Oribacterium sinus F0268]
 gi|227842482|gb|EEJ52699.1| flagellar hook-associated protein FlgK [Oribacterium sinus F0268]
          Length = 594

 Score = 48.3 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 31/80 (38%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
          + F+  L+A    +++L  V  N++N +T G+   ++K S +            + V  G
Sbjct: 7  SGFDTALSALRMNQKKLDVVGHNLANMNTEGYTRQELKTSSINYENPTSFYMNSNDVNVG 66

Query: 63 KEYLSKEVGSFISTGTELDF 82
                EV        +  +
Sbjct: 67 FGVAMDEVRQLRDQFLDGQY 86


>gi|224370789|ref|YP_002604953.1| FlgC [Desulfobacterium autotrophicum HRM2]
 gi|223693506|gb|ACN16789.1| FlgC [Desulfobacterium autotrophicum HRM2]
          Length = 165

 Score = 48.3 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 22/51 (43%), Gaps = 8/51 (15%)

Query: 1  MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43
          M    S  I      A   +++ +A+N++N DT     G  +R   V F +
Sbjct: 1  MDLLDSMKISATGLAAHRTKMNVIAENLANVDTTRTADGGPYRRKMVVFKD 51



 Score = 46.0 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 22/46 (47%), Gaps = 1/46 (2%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G++   N + + E+  MI   + + +  T I   +  +L+A+  + 
Sbjct: 120 GYVAMPNVDHLTEVADMIVAKRSYEASITAISNTKSMILKAL-ELG 164


>gi|150019110|ref|YP_001311364.1| flagellar hook-associated protein FlgK [Clostridium beijerinckii
           NCIMB 8052]
 gi|149905575|gb|ABR36408.1| flagellar hook-associated protein FlgK [Clostridium beijerinckii
           NCIMB 8052]
          Length = 583

 Score = 48.3 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 6/43 (13%), Positives = 16/43 (37%)

Query: 199 LEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           L +S  +   E   +I     + +   +I   ++ +   I  +
Sbjct: 539 LSESGVSIDEETTNLIQFQHAYQANAKVISTVDELLDVVINGL 581



 Score = 45.2 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 7/34 (20%), Positives = 14/34 (41%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
          I        +  ++T + N+SN  T G+   +  
Sbjct: 10 IAKRGLNVQQGNINTTSHNISNASTTGYSRQRAV 43


>gi|16080594|ref|NP_391421.1| flagellar hook-associated protein FlgK [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221311492|ref|ZP_03593339.1| flagellar hook-associated protein FlgK [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221315819|ref|ZP_03597624.1| flagellar hook-associated protein FlgK [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221320734|ref|ZP_03602028.1| flagellar hook-associated protein FlgK [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221325019|ref|ZP_03606313.1| flagellar hook-associated protein FlgK [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|2828498|sp|P39810|FLGK_BACSU RecName: Full=Flagellar hook-associated protein 1; Short=HAP1
 gi|1762338|gb|AAC44946.1| flagellar-hook associated protein 1 (HAP1) [Bacillus subtilis
           subsp. subtilis str. 168]
 gi|2636067|emb|CAB15558.1| flagellar hook-filament junction [Bacillus subtilis subsp. subtilis
           str. 168]
          Length = 507

 Score = 48.3 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 7/42 (16%), Positives = 17/42 (40%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            S  +   EM  MI     +N+   ++   ++ + + I  + 
Sbjct: 462 MSAVSLDEEMTNMIQFQHAYNAAARMVTLQDELLDKVINGMG 503



 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 35/92 (38%), Gaps = 2/92 (2%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS--EVVGAIKNDIDQKISFVAS 61
                 A  A +  LST A+N++N +T G+   +V     +   A+  + ++    + +
Sbjct: 7  GLETARRALSAQQAALSTTANNVANANTDGYTRQRVSLEATDYFPAVSKNAEKTAGQMGT 66

Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALE 93
          G +  S E    I    +         ++  +
Sbjct: 67 GVQGKSVERIRDIFLDYQYRLQNNSAGYYDTK 98


>gi|90418393|ref|ZP_01226305.1| flagellar basal-body rod protein flgC [Aurantimonas manganoxydans
          SI85-9A1]
 gi|90338065|gb|EAS51716.1| flagellar basal-body rod protein flgC [Aurantimonas manganoxydans
          SI85-9A1]
          Length = 138

 Score = 48.3 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 22/56 (39%), Gaps = 7/56 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKN 50
           +S  I  +   A   R+  V++N++N  T G       ++   V F   +  +  
Sbjct: 6  LSSLKIAASGLQAQSTRMRIVSENIANAQTTGTTPGSDPYQRKMVSFQSELDRVSG 61



 Score = 43.7 bits (101), Expect = 0.025,   Method: Composition-based stats.
 Identities = 11/124 (8%), Positives = 33/124 (26%)

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                      +     +        G    + K+++             V  +  G   
Sbjct: 15  GLQAQSTRMRIVSENIANAQTTGTTPGSDPYQRKMVSFQSELDRVSGAQMVSVDKVGRDD 74

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
                  +  +      G+++  N   + EM  M    + + +   ++ +  + +   I 
Sbjct: 75  TPFILESDPGNPAANADGYVKMPNVRMLVEMADMREANRSYEANIQVVKQAREIINMTID 134

Query: 240 NIAS 243
            + S
Sbjct: 135 LLRS 138


>gi|260892170|ref|YP_003238267.1| flagellar hook-associated protein FlgK [Ammonifex degensii KC4]
 gi|260864311|gb|ACX51417.1| flagellar hook-associated protein FlgK [Ammonifex degensii KC4]
          Length = 570

 Score = 48.3 bits (113), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 12/86 (13%), Positives = 29/86 (33%), Gaps = 9/86 (10%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE---------VVGAIKNDIDQ 54
               L A +A+++ + T A N++N  T G+   +V+ +          +  A    +  
Sbjct: 7  GLETTLRALMAMQRSMETAAHNIANASTPGYSRQRVELAASSAYTIPSVLRPAAPGQLGT 66

Query: 55 KISFVASGKEYLSKEVGSFISTGTEL 80
           +      +         +    + L
Sbjct: 67 GVDITGIKRVREEFLDRQWREENSRL 92


>gi|92116887|ref|YP_576616.1| flagellar hook-associated protein [Nitrobacter hamburgensis X14]
 gi|91799781|gb|ABE62156.1| Flagellar hook-associated protein [Nitrobacter hamburgensis X14]
          Length = 619

 Score = 48.3 bits (113), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 35/79 (44%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
          ++ +I ++   A +  LS V+ N++N +T G+    +   ++V        + I    + 
Sbjct: 5  SALSIAMSGLRANQAALSIVSGNVANANTPGYVAQTLVQDQIVTGSTGSGVRVIGVNRTL 64

Query: 63 KEYLSKEVGSFISTGTELD 81
            Y+  ++ +  + G   D
Sbjct: 65 DTYVQSQLRTENAGGAYAD 83



 Score = 39.1 bits (89), Expect = 0.50,   Method: Composition-based stats.
 Identities = 15/119 (12%), Positives = 33/119 (27%)

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
                  +                    +  G   A          Q FV  ++S  +  
Sbjct: 498 PVTPAGDTTRSDFIFDQLTSATYTYSPNTGLGAAAAPFKGTLPSFLQQFVSVQSSAATTA 557

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
                 +D+   T++  F   +  N   EM  +I L   + +   ++   +  M   ++
Sbjct: 558 KQVAQGQDVVVNTLQEKFNAKAGVNIDTEMTNLIALQNSYAANAHVMSVVQSMMQTLLQ 616


>gi|322382306|ref|ZP_08056213.1| flagellar basal body rod protein FlgB-like protein [Paenibacillus
          larvae subsp. larvae B-3650]
 gi|321153659|gb|EFX46034.1| flagellar basal body rod protein FlgB-like protein [Paenibacillus
          larvae subsp. larvae B-3650]
          Length = 137

 Score = 48.3 bits (113), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 26/80 (32%), Gaps = 7/80 (8%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M+ S         A   R   +A+N++N DT  F+   V F E++        + +    
Sbjct: 13 MERSL-------DASALRQRVIANNVANVDTPQFKRSDVLFEELLQNEITGSVKPLEGYR 65

Query: 61 SGKEYLSKEVGSFISTGTEL 80
          +   +      S        
Sbjct: 66 TDPRHFKIGQPSLPEGAQIS 85


>gi|304390261|ref|ZP_07372215.1| flagellar hook-associated protein FlgK [Mobiluncus curtisii
          subsp. curtisii ATCC 35241]
 gi|304326743|gb|EFL93987.1| flagellar hook-associated protein FlgK [Mobiluncus curtisii
          subsp. curtisii ATCC 35241]
          Length = 687

 Score = 48.3 bits (113), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 21/42 (50%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44
          +S N GL    A ++ +     N++N +T G+   +V+   +
Sbjct: 6  SSLNAGLTGLYAAQRLIEVSGQNINNMNTPGYTRQRVEQRAL 47



 Score = 41.0 bits (94), Expect = 0.16,   Method: Composition-based stats.
 Identities = 4/39 (10%), Positives = 12/39 (30%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            S+ +   E+  +I     +     ++      +   I 
Sbjct: 646 QSSVDMNEEVINLIQGQHAYAGAARIMSTVNSMLEALIN 684


>gi|298345981|ref|YP_003718668.1| flagellar hook-associated protein FlgK [Mobiluncus curtisii ATCC
          43063]
 gi|298236042|gb|ADI67174.1| flagellar hook-associated protein FlgK [Mobiluncus curtisii ATCC
          43063]
          Length = 687

 Score = 48.3 bits (113), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 21/42 (50%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44
          +S N GL    A ++ +     N++N +T G+   +V+   +
Sbjct: 6  SSLNAGLTGLYAAQRLIEVSGQNINNMNTPGYTRQRVEQRAL 47



 Score = 41.0 bits (94), Expect = 0.16,   Method: Composition-based stats.
 Identities = 4/39 (10%), Positives = 12/39 (30%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            S+ +   E+  +I     +     ++      +   I 
Sbjct: 646 QSSVDMNEEVINLIQGQHAYAGAARIMSTVNSMLEALIN 684


>gi|153938711|ref|YP_001391964.1| flagellar basal body rod protein FlgC [Clostridium botulinum F str.
           Langeland]
 gi|152934607|gb|ABS40105.1| flagellar basal-body rod protein FlgC [Clostridium botulinum F str.
           Langeland]
 gi|295319981|gb|ADG00359.1| flagellar basal-body rod protein FlgC [Clostridium botulinum F str.
           230613]
          Length = 144

 Score = 48.3 bits (113), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 21/42 (50%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N N + EM  M+   + + +  T+++  +    +A+
Sbjct: 99  GYVSMPNVNVLNEMADMMASVRTYEANVTVMNAEKSMFGKAL 140



 Score = 42.2 bits (97), Expect = 0.059,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 20/50 (40%), Gaps = 9/50 (18%)

Query: 1  MQTSFNI---GLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKF 41
          M  +F+      +   A   R+ T+A N+SN  T     G  ++     F
Sbjct: 1  MIKAFDTMRISASGLSAERLRMDTIASNISNATTTRTENGGPYKRKIAVF 50


>gi|149201615|ref|ZP_01878589.1| FlgK flagellar hook-associated protein 1 [Roseovarius sp. TM1035]
 gi|149144663|gb|EDM32692.1| FlgK flagellar hook-associated protein 1 [Roseovarius sp. TM1035]
          Length = 1335

 Score = 48.3 bits (113), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 18/43 (41%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
          M    +IG    LA    L    +N++N DT G+R       E
Sbjct: 1  MVDLMDIGRGGVLAYRTALGVTGENIANVDTAGYRRRDAVMQE 43


>gi|331005437|ref|ZP_08328816.1| flagellar basal body protein [gamma proteobacterium IMCC1989]
 gi|330420713|gb|EGG95000.1| flagellar basal body protein [gamma proteobacterium IMCC1989]
          Length = 130

 Score = 48.3 bits (113), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 19/49 (38%)

Query: 9  LAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS 57
          + A   L  R   ++ N++N  T G+    V F + +  +  D      
Sbjct: 14 MTALDGLLLRHQVISHNIANVSTPGYSAKTVSFEQFLTNMSMDATSPSQ 62


>gi|153954739|ref|YP_001395504.1| hypothetical protein CKL_2121 [Clostridium kluyveri DSM 555]
 gi|219855203|ref|YP_002472325.1| hypothetical protein CKR_1860 [Clostridium kluyveri NBRC 12016]
 gi|146347597|gb|EDK34133.1| FlgK [Clostridium kluyveri DSM 555]
 gi|219568927|dbj|BAH06911.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 632

 Score = 48.3 bits (113), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 8/75 (10%), Positives = 20/75 (26%)

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
              V +              E     +  +     S  +   EM  +I     + +   +
Sbjct: 556 NNLVNKVGMHEEEAKKQVDYEATQLESFTQSRESTSGVSLDEEMTNLIQFQHCYQANAKM 615

Query: 227 IDENEKSMLEAIRNI 241
           I   ++ +   I  +
Sbjct: 616 ISTVDELLDVVINGL 630



 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 7/38 (18%), Positives = 18/38 (47%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
          + FN   +   A +  ++  + N++N +T G+   +  
Sbjct: 6  SIFNTAKSGLFAQQTSINVTSHNIANAETEGYSRQRAT 43


>gi|302669846|ref|YP_003829806.1| flagellar hook-associated protein FlgK1 [Butyrivibrio
          proteoclasticus B316]
 gi|302394319|gb|ADL33224.1| flagellar hook-associated protein FlgK1 [Butyrivibrio
          proteoclasticus B316]
          Length = 557

 Score = 48.3 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 21/65 (32%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
            +G +     +  L+T A NM+N DT G+   +V                I+    G  
Sbjct: 7  LYVGQSGLQTSQNALNTTAHNMANVDTEGYTRQQVSQGTRAYQTLERRYDTIAPKQIGTG 66

Query: 65 YLSKE 69
               
Sbjct: 67 VNYNH 71


>gi|289670516|ref|ZP_06491591.1| flagellar hook-associated protein FlgK [Xanthomonas campestris
          pv. musacearum NCPPB4381]
          Length = 229

 Score = 48.3 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 27/42 (64%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
           +  + G +A +A ++ LSTV+ N++N +T G+   +V+F+ 
Sbjct: 1  MSIMSTGTSALIAFQRALSTVSHNVANINTEGYSRQRVEFAT 42


>gi|238919265|ref|YP_002932780.1| flagellar hook-associated protein FlgK, [Edwardsiella ictaluri
          93-146]
 gi|238868834|gb|ACR68545.1| flagellar hook-associated protein FlgK, putative [Edwardsiella
          ictaluri 93-146]
          Length = 550

 Score = 48.3 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 19/43 (44%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
          M    N  ++   A +  L   ++N++N  T G+    V  +E
Sbjct: 1  MANLINNAMSGLSAAQTALGVTSNNINNVYTAGYNRQTVTLAE 43


>gi|116326933|ref|YP_796653.1| flagellar hook-associated protein FlgK [Leptospira borgpetersenii
           serovar Hardjo-bovis L550]
 gi|116332402|ref|YP_802120.1| flagellar hook-associated protein FlgK [Leptospira borgpetersenii
           serovar Hardjo-bovis JB197]
 gi|116119677|gb|ABJ77720.1| Endoflagellar hook junction protein [Leptospira borgpetersenii
           serovar Hardjo-bovis L550]
 gi|116126091|gb|ABJ77362.1| Endoflagellar hook junction protein [Leptospira borgpetersenii
           serovar Hardjo-bovis JB197]
          Length = 636

 Score = 48.3 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 7/39 (17%), Positives = 15/39 (38%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            N   EM  M+     +N+   +I+   + +   I  + 
Sbjct: 597 VNLDEEMANMVQFQHSYNASAKMINTINEILDTIINRLG 635



 Score = 36.0 bits (81), Expect = 5.0,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 31/99 (31%), Gaps = 9/99 (9%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV---------VGAIKNDID 53
           +   IG     A +Q L T   N+SN D   +   +V  + +            +   I 
Sbjct: 6   SGLEIGKRGLTAHQQALQTTGHNISNADNKHYARQRVTMTAMDPLYDPSLNRANLPGQIG 65

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL 92
           Q +   +  +   +      I T    D+    + +   
Sbjct: 66  QGVEIASIERIRDNFIDDRIIETSGNKDYWAARNEYLYQ 104


>gi|212634354|ref|YP_002310879.1| flagellar basal body rod protein [Shewanella piezotolerans WP3]
 gi|212555838|gb|ACJ28292.1| Flagellar basal body rod protein [Shewanella piezotolerans WP3]
          Length = 640

 Score = 48.3 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/51 (19%), Positives = 22/51 (43%), Gaps = 1/51 (1%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51
          M    +I     LA + +L+  ++N++N +T G+       S +      +
Sbjct: 3  MD-LLSIARTGVLASQSQLAITSNNIANANTDGYNRQVASQSALDSQRMGN 52



 Score = 35.2 bits (79), Expect = 7.9,   Method: Composition-based stats.
 Identities = 4/41 (9%), Positives = 13/41 (31%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E   ++   Q + +   ++    +       ++ 
Sbjct: 600 SGVNLDEEAANLMRFQQSYQASARIMTTATEIFNTLFSSLR 640


>gi|89902483|ref|YP_524954.1| flagellar hook-associated protein [Rhodoferax ferrireducens T118]
 gi|89347220|gb|ABD71423.1| Flagellar hook-associated protein [Rhodoferax ferrireducens T118]
          Length = 644

 Score = 48.3 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 19/52 (36%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M    ++G  A  A +  L T  +N++N +T G+           G      
Sbjct: 1  MSGLLSVGTRALQANQVMLQTAGNNIANVNTPGYSRQSAVLQTSTGQFTGGG 52



 Score = 37.9 bits (86), Expect = 1.2,   Method: Composition-based stats.
 Identities = 5/41 (12%), Positives = 15/41 (36%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E  +++   Q + +   ++   +      I+ + 
Sbjct: 604 SGVNLDEEAAKLLQYQQAYQASAKMMQIAQGIFDTLIQTLR 644


>gi|315657526|ref|ZP_07910408.1| flagellar hook-associated protein FlgK [Mobiluncus curtisii
          subsp. holmesii ATCC 35242]
 gi|315491998|gb|EFU81607.1| flagellar hook-associated protein FlgK [Mobiluncus curtisii
          subsp. holmesii ATCC 35242]
          Length = 688

 Score = 48.3 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 21/42 (50%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44
          +S N GL    A ++ +     N++N +T G+   +V+   +
Sbjct: 6  SSLNAGLTGLYAAQRLIEVSGQNINNMNTPGYTRQRVEQRAL 47



 Score = 41.0 bits (94), Expect = 0.16,   Method: Composition-based stats.
 Identities = 4/39 (10%), Positives = 12/39 (30%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            S+ +   E+  +I     +     ++      +   I 
Sbjct: 647 QSSVDMNEEVINLIQGQHAYAGAARIMSTVNSMLEALIN 685


>gi|302037635|ref|YP_003797957.1| first flagellar hook-filament junction protein FlgK [Candidatus
           Nitrospira defluvii]
 gi|300605699|emb|CBK42032.1| First flagellar hook-filament junction protein FlgK [Candidatus
           Nitrospira defluvii]
          Length = 464

 Score = 48.3 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 6/40 (15%), Positives = 18/40 (45%)

Query: 200 EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           E S  +   E+  ++   + F + + LI  +++ +   + 
Sbjct: 422 EVSGVSMDEELINLLKYQRAFEAASKLITTSDEMLQTILT 461



 Score = 45.2 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 24/65 (36%), Gaps = 2/65 (3%)

Query: 2  QTSFN-IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
                IG  A    ++ LS    N++N  T G+   ++  SE +        Q  + V 
Sbjct: 4  LNGLFGIGSNALATFQRALSVTGQNIANVSTPGYSRQEITLSESL-PENGQPGQIGTGVT 62

Query: 61 SGKEY 65
          + +  
Sbjct: 63 ATEIR 67


>gi|222053739|ref|YP_002536101.1| flagellar hook-associated protein FlgK [Geobacter sp. FRC-32]
 gi|221563028|gb|ACM19000.1| flagellar hook-associated protein FlgK [Geobacter sp. FRC-32]
          Length = 479

 Score = 48.3 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 32/93 (34%), Gaps = 2/93 (2%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--IDQKISFVASG 62
          F+I      A  Q +   ++N++N +T G+   +V        I +   I   +  VA  
Sbjct: 7  FSIATRGIAAQRQAIEVTSENIANVNTPGYSRQRVIMESGPANIASGFPIGGGVEVVAVQ 66

Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESP 95
          + Y +      ++  +     L          P
Sbjct: 67 RSYDNLLQTQLVNGNSTYQQNLAKQTALQQVEP 99



 Score = 40.6 bits (93), Expect = 0.19,   Method: Composition-based stats.
 Identities = 7/44 (15%), Positives = 16/44 (36%), Gaps = 2/44 (4%)

Query: 197 GFLEDSN--ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
             L +SN   +   E+  ++   + F     L+    + M   +
Sbjct: 432 NTLRESNAGVSLDEELTNLLKYQRAFEGAARLVTTGSEMMDTIL 475


>gi|56460254|ref|YP_155535.1| flagellar basal body rod protein [Idiomarina loihiensis L2TR]
 gi|56179264|gb|AAV81986.1| Flagellar basal body rod protein [Idiomarina loihiensis L2TR]
          Length = 150

 Score = 48.3 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 20/44 (45%)

Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            G++   N N+M EM  MI  ++ + +   + D  +      +R
Sbjct: 103 SGYIYRPNVNTMEEMANMISASRSYQTNVQVADTAKTMTQRLLR 146


>gi|121596124|ref|YP_988020.1| flagellar hook-associated protein FlgK [Acidovorax sp. JS42]
 gi|120608204|gb|ABM43944.1| flagellar hook-associated protein FlgK [Acidovorax sp. JS42]
          Length = 691

 Score = 48.3 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 20/51 (39%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
           +  N+G  A LA +  L T   N++N  T G+    V    V G      
Sbjct: 1  MSLLNVGARALLANQVALQTTGHNIANVSTAGYSRQNVGMETVQGQFTGSG 51



 Score = 42.2 bits (97), Expect = 0.068,   Method: Composition-based stats.
 Identities = 6/41 (14%), Positives = 15/41 (36%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E  ++I   Q + +   ++   +      I+ + 
Sbjct: 650 SGVNLDEEAARLIQYQQAYQASAKMLQIAQNIFDNLIQTMG 690


>gi|74101656|gb|AAZ99746.1| FlgCL [Aeromonas hydrophila]
          Length = 141

 Score = 48.3 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 22/45 (48%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           + GF+  SN N++ EM  M+  ++ F +   +I+         +R
Sbjct: 92  QDGFVYYSNVNAVEEMADMMSASRGFETSVEVINRINSMQQGLLR 136



 Score = 41.0 bits (94), Expect = 0.15,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 6/55 (10%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDT------VGFRTIKVKFSEVVGAIKN 50
             ++I  +A  A   RL TVA N++N D+        FR IK  FS +   +++
Sbjct: 4  NRIYDIAGSAMRAQTVRLDTVASNLANVDSAAGSEEAAFRAIKPVFSTLYQRVQD 58


>gi|308186391|ref|YP_003930522.1| Flagellar basal-body rod protein flgC [Pantoea vagans C9-1]
 gi|308056901|gb|ADO09073.1| Flagellar basal-body rod protein flgC [Pantoea vagans C9-1]
          Length = 134

 Score = 48.3 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 4/43 (9%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G+++  N + + E    +  ++ + +   +++  +  M++ + 
Sbjct: 89  GYVKMPNVDVVSESVNTMSASRSYQANVEVLNTVKSMMMKTLT 131



 Score = 36.4 bits (82), Expect = 3.3,   Method: Composition-based stats.
 Identities = 14/105 (13%), Positives = 26/105 (24%), Gaps = 7/105 (6%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS-EVVGAIKNDIDQ 54
              F+I  +A  A  QRL+  A N++N     G     +   +V F  +          +
Sbjct: 4   LNIFDIAGSAMTAQSQRLNVSASNLANADSVTGPDGKPYVAKQVVFQTDAAPGSATGGVK 63

Query: 55  KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
               V                   +    +      +        
Sbjct: 64  VARVVDDPTPAKLVYDPGNPMADAKGYVKMPNVDVVSESVNTMSA 108


>gi|207093458|ref|ZP_03241245.1| flagellar basal body rod protein FlgC [Helicobacter pylori
           HPKX_438_AG0C1]
          Length = 72

 Score = 48.3 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 19/44 (43%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            +G++   N N++ EM  ++  T+ + +        +     AI
Sbjct: 24  AQGYVAYPNVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAI 67


>gi|168183267|ref|ZP_02617931.1| flagellar basal-body rod protein FlgC [Clostridium botulinum Bf]
 gi|170756841|ref|YP_001782281.1| flagellar basal body rod protein FlgC [Clostridium botulinum B1
           str. Okra]
 gi|226950077|ref|YP_002805168.1| flagellar basal body rod protein FlgC [Clostridium botulinum A2
           str. Kyoto]
 gi|237796104|ref|YP_002863656.1| flagellar basal body rod protein FlgC [Clostridium botulinum Ba4
           str. 657]
 gi|169122053|gb|ACA45889.1| flagellar basal-body rod protein FlgC [Clostridium botulinum B1
           str. Okra]
 gi|182673715|gb|EDT85676.1| flagellar basal-body rod protein FlgC [Clostridium botulinum Bf]
 gi|226841648|gb|ACO84314.1| flagellar basal-body rod protein FlgC [Clostridium botulinum A2
           str. Kyoto]
 gi|229263476|gb|ACQ54509.1| flagellar basal-body rod protein FlgC [Clostridium botulinum Ba4
           str. 657]
          Length = 144

 Score = 48.3 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 21/42 (50%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N N + EM  M+   + + +  T+++  +    +A+
Sbjct: 99  GYVSMPNVNVLNEMADMMASVRTYEANVTVMNAEKSMFGKAL 140



 Score = 42.2 bits (97), Expect = 0.063,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 20/50 (40%), Gaps = 9/50 (18%)

Query: 1  MQTSFNI---GLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKF 41
          M  +F+      +   A   R+ T+A N+SN  T     G  ++     F
Sbjct: 1  MIKAFDTMRISASGLSAERLRMDTIASNISNATTTRTENGGPYKRKIAVF 50


>gi|73539447|ref|YP_299814.1| flagellar basal body rod protein FlgB [Ralstonia eutropha JMP134]
 gi|72122784|gb|AAZ64970.1| Flagellar basal-body rod protein FlgB [Ralstonia eutropha JMP134]
          Length = 135

 Score = 48.3 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 28/89 (31%), Gaps = 4/89 (4%)

Query: 1  MQTSFNIGL----AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56
          M    +  L     A     QR S +A N+++ DT G++     FS  +        +  
Sbjct: 1  MIDRLDSALRFQQEALSLRTQRQSVIASNIAHADTPGYKARDFDFSSTLAQTMERGRRPD 60

Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALE 85
              S          +      +L + + 
Sbjct: 61 GVSLSTTSVRHLPAQAPTRDDADLAYRIP 89


>gi|319764545|ref|YP_004128482.1| flagellar hook-associated protein flgk [Alicycliphilus
          denitrificans BC]
 gi|317119106|gb|ADV01595.1| flagellar hook-associated protein FlgK [Alicycliphilus
          denitrificans BC]
          Length = 660

 Score = 48.3 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 20/51 (39%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
           +  N+G  A LA +  L T   N++N  T G+    V    V G      
Sbjct: 1  MSLLNVGARALLANQVALQTTGHNIANVSTAGYSRQSVAMQTVQGQFTGSG 51



 Score = 45.6 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/150 (12%), Positives = 41/150 (27%), Gaps = 9/150 (6%)

Query: 98  IILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157
              T     ++   G  ++  G     D  +V   +  +         G  S   ++   
Sbjct: 514 QSYTPGQPIQID--GWSITLQGTPQDGDTVTVGNALDPQYGDGYTRNAGNASALMRLRDV 571

Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDS-----NANSMYEMGQ 212
                  +S G+        +          LS        LE S       N   E  +
Sbjct: 572 KMFDESTLSDGYAGLMAQVGTRTQSAQYAAKLSDS--IASNLEASRTAVSGVNLDEEAAR 629

Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           +I   Q + +   ++   +      I+++ 
Sbjct: 630 LIQYQQAYQASAKMLQIAQNIFDNLIQSMG 659


>gi|258512522|ref|YP_003185956.1| flagellar hook-associated protein FlgK [Alicyclobacillus
          acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257479248|gb|ACV59567.1| flagellar hook-associated protein FlgK [Alicyclobacillus
          acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 481

 Score = 48.3 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 22/39 (56%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
            IGL+   A+++  S V +N+ N +T G+    V F+E
Sbjct: 9  LYIGLSGLQAMQEAESVVGNNIDNANTPGYAQETVNFAE 47


>gi|145297453|ref|YP_001140294.1| flagellar basal body rod protein FlgC [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142850225|gb|ABO88546.1| lateral flagellar basal body rod protein, LfgC [Aeromonas
           salmonicida subsp. salmonicida A449]
          Length = 141

 Score = 48.3 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 22/45 (48%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           + GF+  SN N++ EM  M+  ++ F +   +I+         +R
Sbjct: 92  QDGFVYYSNVNAVEEMADMMSASRGFETSVEVINRINSMQQGLLR 136



 Score = 41.0 bits (94), Expect = 0.16,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 6/55 (10%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDT------VGFRTIKVKFSEVVGAIKN 50
             ++I  +A  A   RL TVA N++N D+        FR IK  FS +   +++
Sbjct: 4  NRIYDIAGSAMRAQTVRLDTVASNLANVDSAAGSEDAAFRAIKPVFSTLYQRVQD 58


>gi|320354350|ref|YP_004195689.1| flagellar hook-associated protein FlgK [Desulfobulbus propionicus
          DSM 2032]
 gi|320122852|gb|ADW18398.1| flagellar hook-associated protein FlgK [Desulfobulbus propionicus
          DSM 2032]
          Length = 465

 Score = 48.3 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 9/51 (17%), Positives = 23/51 (45%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
            + N G  + L  ++ +  V +N++N +T G+   + +  ++      D 
Sbjct: 5  LNALNAGKTSLLTNQKSIEIVGNNIANVNTEGYSRQRAELMQIPAVNFGDF 55



 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 8/60 (13%), Positives = 21/60 (35%), Gaps = 3/60 (5%)

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +       +    ++ G+   S  +   EM  +I   + F S    +   ++ M   ++
Sbjct: 406 ALQGAQDAAVQLQNLRDGY---SGVSLEEEMIDLIQYQRGFESSAKFLATVDEMMNALLQ 462


>gi|152980141|ref|YP_001353117.1| flagellar hook-associated protein FlgK [Janthinobacterium sp.
          Marseille]
 gi|151280218|gb|ABR88628.1| FlgK flagellar hook-associated protein [Janthinobacterium sp.
          Marseille]
          Length = 647

 Score = 48.3 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 21/70 (30%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M    +I  +   A +  ++T   N++N  T G+    V  S + G          +   
Sbjct: 1  MSNLLSIAKSGLAAAQAGVATTGHNIANEKTPGYSRQLVIQSSLGGQNLTGGGYIGNGTN 60

Query: 61 SGKEYLSKEV 70
                    
Sbjct: 61 VDSVKRIFND 70



 Score = 40.6 bits (93), Expect = 0.18,   Method: Composition-based stats.
 Identities = 21/150 (14%), Positives = 44/150 (29%), Gaps = 1/150 (0%)

Query: 90  FALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEIS 149
                P G  +T      ++  G+ +  SG     D  ++        +  N+   GE+ 
Sbjct: 496 VPTTFPAGTPVTYTAGSVISFGGAEIKISGAPANGDKFTISANTNGDGDNRNMLALGELQ 555

Query: 150 QKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYE 209
            K  +      Y+   SQ  V    +        +  E      ++     +S  N   E
Sbjct: 556 TKNVLQGGTASYNSAYSQ-LVSLVGNKTRELQTNSASEGALLKQMQTAQQSESGVNLDEE 614

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              ++   Q + +   ++          I 
Sbjct: 615 ATNLLRYQQAYQASGKVMQAVSDMFDVLIS 644


>gi|330826761|ref|YP_004390064.1| flagellar hook-associated protein FlgK [Alicycliphilus
          denitrificans K601]
 gi|329312133|gb|AEB86548.1| flagellar hook-associated protein FlgK [Alicycliphilus
          denitrificans K601]
          Length = 660

 Score = 48.3 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 20/51 (39%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
           +  N+G  A LA +  L T   N++N  T G+    V    V G      
Sbjct: 1  MSLLNVGARALLANQVALQTTGHNIANVSTAGYSRQSVAMQTVQGQFTGSG 51



 Score = 45.6 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/150 (12%), Positives = 41/150 (27%), Gaps = 9/150 (6%)

Query: 98  IILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157
              T     ++   G  ++  G     D  +V   +  +         G  S   ++   
Sbjct: 514 QSYTPGQPIQID--GWSITLQGTPQDGDTVTVGNALDPQYGDGYTRNAGNASALMRLRDV 571

Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDS-----NANSMYEMGQ 212
                  +S G+        +          LS        LE S       N   E  +
Sbjct: 572 KMFDESTLSDGYAGLMAQVGTRTQSAQYAAKLSDS--IASNLEASRTAVSGVNLDEEAAR 629

Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           +I   Q + +   ++   +      I+++ 
Sbjct: 630 LIQYQQAYQASAKMLQIAQNIFDNLIQSMG 659


>gi|308050366|ref|YP_003913932.1| flagellar hook-associated protein FlgK [Ferrimonas balearica DSM
          9799]
 gi|307632556|gb|ADN76858.1| flagellar hook-associated protein FlgK [Ferrimonas balearica DSM
          9799]
          Length = 636

 Score = 48.3 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 20/40 (50%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
          M    +I  +  LA ++++   ++N++N  T G+     +
Sbjct: 1  MADLMSIARSGVLAAQKQMGVTSNNIANVGTEGYNRQVAE 40


>gi|255022062|ref|ZP_05294068.1| Flagellar hook-associated protein flgK [Acidithiobacillus caldus
          ATCC 51756]
 gi|254968548|gb|EET26104.1| Flagellar hook-associated protein flgK [Acidithiobacillus caldus
          ATCC 51756]
          Length = 661

 Score = 48.3 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 27/79 (34%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
            +GL+  LA E  L TV++N++N +T G+ +     +                V +   
Sbjct: 7  LQVGLSGVLASENALQTVSNNIANENTPGYVSEVANLATNPSQPTTFPGGLGEGVQTASI 66

Query: 65 YLSKEVGSFISTGTELDFA 83
            +    +          A
Sbjct: 67 SRNFSKFAQTQFMNATSMA 85


>gi|268316361|ref|YP_003290080.1| flagellar basal-body rod protein FlgC [Rhodothermus marinus DSM
           4252]
 gi|262333895|gb|ACY47692.1| flagellar basal-body rod protein FlgC [Rhodothermus marinus DSM
           4252]
          Length = 166

 Score = 48.3 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 6/42 (14%), Positives = 19/42 (45%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   + N + EM  +I   + + +  + I   ++ +   +
Sbjct: 123 GYVAYPDVNVVEEMAHLISANRIYEANLSTIQAAKEIVKRTL 164



 Score = 35.6 bits (80), Expect = 6.7,   Method: Composition-based stats.
 Identities = 18/128 (14%), Positives = 34/128 (26%), Gaps = 2/128 (1%)

Query: 7   IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66
                  A    +S   +N++N  T   RT +     +  A+  + + +          L
Sbjct: 13  TAARGLEAQRMAMSAATENIANAATT--RTDEGTPYAIKRAVHTNPEVRNRRFYELLSRL 70

Query: 67  SKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDM 126
                +     +     L       L     I  T   R++         A+G     D+
Sbjct: 71  RTAPRTQDPRHSSSPSLLTRLPEAELGPETTIAETLRLRYEYDPTHPHADANGYVAYPDV 130

Query: 127 ASVPIQIP 134
             V     
Sbjct: 131 NVVEEMAH 138


>gi|289666054|ref|ZP_06487635.1| flagellar hook-associated protein FlgK [Xanthomonas campestris
          pv. vasculorum NCPPB702]
          Length = 223

 Score = 48.3 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 27/42 (64%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
           +  + G +A +A ++ LSTV+ N++N +T G+   +V+F+ 
Sbjct: 1  MSIMSTGTSALIAFQRALSTVSHNVANINTEGYSRQRVEFAT 42


>gi|317130315|ref|YP_004096597.1| flagellar hook-associated protein FlgK [Bacillus cellulosilyticus
          DSM 2522]
 gi|315475263|gb|ADU31866.1| flagellar hook-associated protein FlgK [Bacillus cellulosilyticus
          DSM 2522]
          Length = 550

 Score = 48.3 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 16/40 (40%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
                 A    +  L T   N++N +T G+   +V FS 
Sbjct: 8  GLETARRAMTTHQSALHTTGHNIANANTPGYSRQRVNFST 47



 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 7/39 (17%), Positives = 14/39 (35%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            +   EM  MI     +N+    I   ++ +   I  + 
Sbjct: 508 VSLDEEMTNMIQFQHAYNAAARNITMIDEMLDIIINRMG 546


>gi|220934391|ref|YP_002513290.1| flagellar basal-body rod protein FlgB [Thioalkalivibrio sp.
          HL-EbGR7]
 gi|219995701|gb|ACL72303.1| flagellar basal-body rod protein FlgB [Thioalkalivibrio sp.
          HL-EbGR7]
          Length = 130

 Score = 48.3 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/51 (19%), Positives = 20/51 (39%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
            +  I   A     +RL  +A N++N DT  ++   + F   +   +   
Sbjct: 6  DKALGIHADALQLRSRRLELLASNLANADTPNYKARDIDFRAALSQAQGGG 56


>gi|15606427|ref|NP_213807.1| flagellar biosynthesis FlgC [Aquifex aeolicus VF5]
 gi|6225342|sp|O67243|FLGC_AQUAE RecName: Full=Flagellar basal-body rod protein flgC
 gi|2983627|gb|AAC07195.1| flagellar biosynthesis FlgC [Aquifex aeolicus VF5]
          Length = 134

 Score = 48.3 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 6/41 (14%), Positives = 14/41 (34%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
           G++   N   + EM  MI   + + +        ++     
Sbjct: 89  GYVRLPNIEPVKEMVDMITAVRSYEANLKAFSLTKEIFERT 129



 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 25/48 (52%), Gaps = 4/48 (8%)

Query: 1  MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46
          M    + +I  +   A   R++TVA N++N ++  F++    F+ +V 
Sbjct: 2  MDIFNALDISASGMYAQRIRMNTVASNLANYES--FKSDGTPFNRLVP 47


>gi|328470107|gb|EGF41018.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
           10329]
          Length = 457

 Score = 48.3 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 31/99 (31%), Gaps = 1/99 (1%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
               NI L+   A    L   A N+++ +T G+   +   +  VG  K++       V  
Sbjct: 1   MNLVNIALSGLNANRVALDVTAQNVASVNTPGYSRQQALMAT-VGDGKSNRLSSGMGVEV 59

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL 100
                  +      T +    A     + +  S     L
Sbjct: 60  TSIRRVTDQFLVKQTWSTNSLAAYAAGYTSSMSQLENTL 98


>gi|238755319|ref|ZP_04616662.1| hypothetical protein yruck0001_10770 [Yersinia ruckeri ATCC
          29473]
 gi|238706455|gb|EEP98829.1| hypothetical protein yruck0001_10770 [Yersinia ruckeri ATCC
          29473]
          Length = 547

 Score = 48.3 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 19/42 (45%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
              N  ++   A +  LSTV +N+SN    G+      F++
Sbjct: 3  NNLINTAMSGLSAAQYALSTVGNNISNFQVTGYNRQNAIFAQ 44


>gi|332140552|ref|YP_004426290.1| flagellar hook-associated protein FlgK [Alteromonas macleodii
          str. 'Deep ecotype']
 gi|327550574|gb|AEA97292.1| flagellar hook-associated protein FlgK [Alteromonas macleodii
          str. 'Deep ecotype']
          Length = 680

 Score = 48.3 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 7/35 (20%), Positives = 17/35 (48%)

Query: 8  GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS 42
            +   A  + L T ++N++N +T G+   + +  
Sbjct: 10 ATSGVNASSKLLQTTSNNIANVNTPGYVRERTELQ 44


>gi|312621565|ref|YP_004023178.1| flagellar basal-body rod protein flgb [Caldicellulosiruptor
          kronotskyensis 2002]
 gi|312202032|gb|ADQ45359.1| flagellar basal-body rod protein FlgB [Caldicellulosiruptor
          kronotskyensis 2002]
          Length = 133

 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 7/56 (12%), Positives = 20/56 (35%)

Query: 21 TVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76
           +++N++N DT G++   + F   +    +  +       + +           S 
Sbjct: 24 IISNNIANADTPGYKAKDLNFEAFLQRSLDQEESLELVTTNERHIKESSSNPDNSI 79


>gi|308068649|ref|YP_003870254.1| flagellar basal-body rod protein FlgB [Paenibacillus polymyxa
          E681]
 gi|305857928|gb|ADM69716.1| flagellar basal-body rod protein FlgB [Paenibacillus polymyxa
          E681]
          Length = 135

 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 27/71 (38%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69
          A   A   R   +ADN+SN DT  F+  +V F E++    +     +    +   +    
Sbjct: 14 AGVQAANTRQRVMADNISNADTPYFKRSEVSFEELLQQQMDGDVTPLRGKVTNSRHFQIG 73

Query: 70 VGSFISTGTEL 80
            + I   T  
Sbjct: 74 PVNSIPDATVT 84


>gi|292492360|ref|YP_003527799.1| flagellar basal-body rod protein FlgB [Nitrosococcus halophilus
          Nc4]
 gi|291580955|gb|ADE15412.1| flagellar basal-body rod protein FlgB [Nitrosococcus halophilus
          Nc4]
          Length = 133

 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 26/68 (38%), Gaps = 4/68 (5%)

Query: 1  MQTSFNIGLA----AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56
          M  SF+  L     A     +R   +A N++N DT G++   + F   +   +       
Sbjct: 1  MSISFDSALGIHPYALSLWSRRAELLAANLANADTPGYKARDIDFKTALQQAQGQGAALP 60

Query: 57 SFVASGKE 64
            V  G+ 
Sbjct: 61 LQVTHGRH 68


>gi|332187895|ref|ZP_08389628.1| flagellar basal-body rod protein FlgB [Sphingomonas sp. S17]
 gi|332012056|gb|EGI54128.1| flagellar basal-body rod protein FlgB [Sphingomonas sp. S17]
          Length = 115

 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 23/57 (40%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66
          AA     QR+  +A N++N  T GF+   + F   + A++     +    A      
Sbjct: 12 AALEVRGQRMGVLASNIANASTPGFKARDIDFKAALAAVEGGQQDQGIAKAMKYRVP 68


>gi|315654567|ref|ZP_07907473.1| flagellar hook-associated protein FlgK [Mobiluncus curtisii ATCC
          51333]
 gi|315491031|gb|EFU80650.1| flagellar hook-associated protein FlgK [Mobiluncus curtisii ATCC
          51333]
          Length = 681

 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 21/42 (50%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44
          +S N GL    A ++ +     N++N +T G+   +V+   +
Sbjct: 6  SSLNAGLTGLYAAQRLIEVSGQNINNMNTPGYTRQRVEQRAL 47



 Score = 40.6 bits (93), Expect = 0.18,   Method: Composition-based stats.
 Identities = 4/39 (10%), Positives = 12/39 (30%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            S+ +   E+  +I     +     ++      +   I 
Sbjct: 640 QSSVDMNEEVINLIQGQHAYAGAARIMSTVNSMLEALIN 678


>gi|258514001|ref|YP_003190223.1| flagellar basal-body rod protein FlgC [Desulfotomaculum acetoxidans
           DSM 771]
 gi|257777706|gb|ACV61600.1| flagellar basal-body rod protein FlgC [Desulfotomaculum acetoxidans
           DSM 771]
          Length = 140

 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 22/44 (50%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           + G +   N N + EM  M+   + + +  T ++ ++   ++A+
Sbjct: 92  QEGNVAYPNINIVNEMVNMMAARRAYEANATALEASKSMAMKAL 135



 Score = 43.3 bits (100), Expect = 0.028,   Method: Composition-based stats.
 Identities = 12/92 (13%), Positives = 33/92 (35%), Gaps = 6/92 (6%)

Query: 14  ALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLS 67
           A    L  +++N++N +T     G  ++     FS+ + ++ +    +   V   +    
Sbjct: 16  AERLWLDIISNNIANLNTTRTAKGGPYKRQMPVFSQRLQSVVDSAKTRAGGVEVNRVVQD 75

Query: 68  KEVGSFISTGTELDFALEGDAWFALESPRGII 99
                 +   +  D   EG+  +   +    +
Sbjct: 76  NAPPRMVYDPSHPDADQEGNVAYPNINIVNEM 107


>gi|114330359|ref|YP_746581.1| flagellar basal-body rod protein FlgC [Nitrosomonas eutropha C91]
 gi|114307373|gb|ABI58616.1| flagellar basal-body rod protein FlgC [Nitrosomonas eutropha C91]
          Length = 134

 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 6/43 (13%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N + EM  M+  ++ + +   +++  +  + + + 
Sbjct: 89  GYVTLPNVNVVDEMVNMMSASRSYQNSVDMMNVTKTLLQKTLS 131



 Score = 42.5 bits (98), Expect = 0.047,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 41/118 (34%), Gaps = 6/118 (5%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNT----DTVG--FRTIKVKFSEVVGAIKNDIDQKISF 58
           FN+  +A  A  QRL+ VA N++N      + G  +R+ +V F  V  +       K++ 
Sbjct: 7   FNVAGSAMAAQSQRLNVVASNLANADSATSSTGEAYRSRQVVFRTVDISADKAKGVKVAG 66

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVS 116
           +      +            E  +    +     E    +  +R  +  V       +
Sbjct: 67  IVHDPSPMRVVYDPKHPMADEKGYVTLPNVNVVDEMVNMMSASRSYQNSVDMMNVTKT 124


>gi|222530142|ref|YP_002574024.1| flagellar basal-body rod protein FlgB [Caldicellulosiruptor
          bescii DSM 6725]
 gi|222456989|gb|ACM61251.1| flagellar basal-body rod protein FlgB [Caldicellulosiruptor
          bescii DSM 6725]
          Length = 133

 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 8/55 (14%), Positives = 20/55 (36%)

Query: 21 TVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIS 75
           +++N++N DT G++   + F   +    N  +       + +           S
Sbjct: 24 IISNNIANADTPGYKAKDLNFRAFLQRSLNQEESLELVTTNERHIKESSSNPDNS 78


>gi|207111880|ref|ZP_03246042.1| flagellar basal body rod protein FlgG [Helicobacter pylori
           HPKX_438_CA4C1]
          Length = 36

 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 4/34 (11%), Positives = 15/34 (44%), Gaps = 1/34 (2%)

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
            EM  +I   + + + +  I   +  + + + ++
Sbjct: 1   EEMTDLITAQRAYEANSKSIQTADAML-QTVNSL 33


>gi|307546962|ref|YP_003899441.1| flagellar hook-associated protein FlgK [Halomonas elongata DSM
          2581]
 gi|307218986|emb|CBV44256.1| flagellar hook-associated protein FlgK [Halomonas elongata DSM
          2581]
          Length = 555

 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 21/42 (50%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
           + F+ GL+   A +  LST ++N+SN  T G+        E
Sbjct: 1  MSIFSTGLSGLNAAQNALSTTSNNISNVFTPGYNREVAILGE 42



 Score = 39.1 bits (89), Expect = 0.62,   Method: Composition-based stats.
 Identities = 6/38 (15%), Positives = 14/38 (36%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            S  N   E   +I   Q + +   +I+  +  +   +
Sbjct: 514 ASGVNLDEEAANLIRYQQYYQANAKVIEAGKTMIDTIL 551


>gi|34498334|ref|NP_902549.1| flagellar hook-associated protein 1 [Chromobacterium violaceum ATCC
           12472]
 gi|34104188|gb|AAQ60547.1| flagellar hook-associated protein 1 [Chromobacterium violaceum ATCC
           12472]
          Length = 595

 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/176 (12%), Positives = 53/176 (30%), Gaps = 3/176 (1%)

Query: 7   IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKF--SEVVGAIKNDIDQKISFVASGKE 64
           IGL+     +  LS  ++N+SN +T G+    +       V A    + Q +   +  + 
Sbjct: 11  IGLSGLNVAQNALSVTSNNISNVNTPGYNAQYMTQAGRTPVNAGFGYLGQGVDATSVMRT 70

Query: 65  YLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGR-FKVTDDGSLVSASGKYPV 123
           Y    V    +  T   +           +      T+       +  G++ + + +   
Sbjct: 71  YNQYLVTQMQTAQTNSSYYTTQSQQLQQVANMIQNSTQSVSPAIQSFFGAMQTLTQQPNS 130

Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                  + + Q           ++ Q  + +      SV       ++  +    
Sbjct: 131 TASRQAVLGMAQALATSMTSMNSQLQQIQQGVNNQISSSVQSINALAQQIANLNQQ 186


>gi|303325592|ref|ZP_07356035.1| flagellar hook-associated protein FlgK [Desulfovibrio sp.
          3_1_syn3]
 gi|302863508|gb|EFL86439.1| flagellar hook-associated protein FlgK [Desulfovibrio sp.
          3_1_syn3]
          Length = 710

 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 26/79 (32%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
           NIG +A  A +  +S   +N++N DT G+    V   +  G       Q +   A    
Sbjct: 6  LNIGQSALNASQAWISVTGNNLANADTEGYSRQYVDQRDAGGLTAKPGAQGLGVNAQQIM 65

Query: 65 YLSKEVGSFISTGTELDFA 83
                          + A
Sbjct: 66 RFFDSFLERSYVRQATNSA 84



 Score = 46.0 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 7/37 (18%), Positives = 14/37 (37%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N   EM  +I     + +   LI   ++ +   +
Sbjct: 670 SGVNMDEEMSNLIKFQHSYTAAAKLITTADQMLQTLL 706


>gi|77918753|ref|YP_356568.1| flagellar hook-associated protein [Pelobacter carbinolicus DSM
           2380]
 gi|77544836|gb|ABA88398.1| flagellar hook-associated protein [Pelobacter carbinolicus DSM
           2380]
          Length = 464

 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 6/36 (16%), Positives = 14/36 (38%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +   EM  +I   + F +   L+   ++ M   + 
Sbjct: 426 VSLEEEMINLIQYQRGFEASAKLLTTVDEMMDTVLS 461



 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 9/50 (18%), Positives = 18/50 (36%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
          + N+G  +    +  L    +N++N +T G+    V    V         
Sbjct: 7  ALNLGKTSLATHQTLLDVTGNNIANVNTDGYSRQSVDLGTVPALNFRGFQ 56


>gi|127512285|ref|YP_001093482.1| flagellar hook-associated protein FlgK [Shewanella loihica PV-4]
 gi|126637580|gb|ABO23223.1| flagellar hook-associated protein FlgK [Shewanella loihica PV-4]
          Length = 638

 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/80 (15%), Positives = 29/80 (36%), Gaps = 1/80 (1%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M    NI     LA + +L+  ++N++N +T G+     + S +      +         
Sbjct: 3  MD-LLNIARTGVLASQSQLAVTSNNITNANTQGYHRQVAEQSSLESQRLGNSFYGAGTYI 61

Query: 61 SGKEYLSKEVGSFISTGTEL 80
          +  + +  E  +      + 
Sbjct: 62 TDVKRIYNEYAARELRIGQT 81



 Score = 35.2 bits (79), Expect = 8.5,   Method: Composition-based stats.
 Identities = 4/41 (9%), Positives = 13/41 (31%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E   ++   Q + +   ++    +       ++ 
Sbjct: 598 SGVNLDEEAANLMRFQQSYQASARIMTTATEIFDTLFSSVR 638


>gi|114777413|ref|ZP_01452410.1| Flagellar basal-body rod protein FlgC [Mariprofundus ferrooxydans
           PV-1]
 gi|114552195|gb|EAU54697.1| Flagellar basal-body rod protein FlgC [Mariprofundus ferrooxydans
           PV-1]
          Length = 148

 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 23/46 (50%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G ++  N N + EM  M    + F +  T ++ +++  L+++  + 
Sbjct: 103 GIVKMPNVNPVEEMVDMNSAARSFEANVTTMEASKRMFLKSLELLR 148



 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 6/54 (11%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIK 49
           +S +I  +   A   R+  VA+N++N  +     G  +R  +V F  V  A  
Sbjct: 6  LSSMHISASGMSAQRTRMDIVAENIANAGSTRTSEGGPYRRRQVIFQAVSPAQP 59


>gi|332981428|ref|YP_004462869.1| flagellar basal-body rod protein FlgB [Mahella australiensis 50-1
          BON]
 gi|332699106|gb|AEE96047.1| flagellar basal-body rod protein FlgB [Mahella australiensis 50-1
          BON]
          Length = 137

 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 23/41 (56%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51
          A   L  R   ++DN++N DT GF+  KV F +V+    +D
Sbjct: 17 ALDGLWMRNQVISDNVANVDTPGFKASKVAFEDVLKGALDD 57


>gi|317047689|ref|YP_004115337.1| flagellar basal-body rod protein FlgC [Pantoea sp. At-9b]
 gi|316949306|gb|ADU68781.1| flagellar basal-body rod protein FlgC [Pantoea sp. At-9b]
          Length = 134

 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 9/92 (9%), Positives = 36/92 (39%)

Query: 148 ISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSM 207
                K +      +  M+ G V+       P+      +  + +  ++G+++  N + +
Sbjct: 40  QPYVAKQVVFQTDAAPGMATGGVKVAGVVDDPSPAKLVYDPGNPMADQKGYVKMPNVDVV 99

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            E    +  ++ + +   +++  +  M++ + 
Sbjct: 100 AETVNTMSASRSYQANVEVLNTVKSMMMKTLT 131



 Score = 35.6 bits (80), Expect = 5.8,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 24/68 (35%), Gaps = 6/68 (8%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSEVVGAIKNDIDQK 55
             F+I  +A  A  QRL+  A N++N     G     +   +V F             K
Sbjct: 4  LNIFDIAGSAMTAQSQRLNVSASNLANADSVTGPDGQPYVAKQVVFQTDAAPGMATGGVK 63

Query: 56 ISFVASGK 63
          ++ V    
Sbjct: 64 VAGVVDDP 71


>gi|153953776|ref|YP_001394541.1| flagellar basal body rod protein FlgC [Clostridium kluyveri DSM
           555]
 gi|219854392|ref|YP_002471514.1| hypothetical protein CKR_1049 [Clostridium kluyveri NBRC 12016]
 gi|146346657|gb|EDK33193.1| FlgC [Clostridium kluyveri DSM 555]
 gi|219568116|dbj|BAH06100.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 143

 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 19/42 (45%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N N + EM  M+   + + +  + I   +    +A+
Sbjct: 98  GYVSMPNVNILNEMADMMVAVRSYEANLSAISAEKSMFSKAL 139



 Score = 45.6 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 26/74 (35%), Gaps = 9/74 (12%)

Query: 1  MQTSFNI---GLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKND 51
          M  +FN      +   A   R+ T+A NM+N +T        +R     F E +    N 
Sbjct: 1  MIQAFNTLRISASGLSAERLRMDTIASNMANVETTKGADGNPYRRKIAVFQENLQKQLNK 60

Query: 52 IDQKISFVASGKEY 65
            +  +     K  
Sbjct: 61 AGRYENVSQGVKAV 74


>gi|257871286|ref|ZP_05650939.1| flagellar basal-body rod protein FlgB [Enterococcus gallinarum
          EG2]
 gi|257805450|gb|EEV34272.1| flagellar basal-body rod protein FlgB [Enterococcus gallinarum
          EG2]
          Length = 136

 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/58 (17%), Positives = 22/58 (37%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLS 67
           A     QR   ++ N++N +T G++  ++ F   +           +  AS  +   
Sbjct: 26 TAMNVSAQRAELISSNIANVNTDGYKAKRIVFESELKQALASSGTDAATEASVSQVKP 83


>gi|23499914|ref|NP_699354.1| flagellar basal body rod protein FlgC [Brucella suis 1330]
 gi|23463491|gb|AAN33359.1| flagellar basal-body rod protein FlgC [Brucella suis 1330]
          Length = 140

 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 8/47 (17%), Positives = 21/47 (44%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           G+++  N N + EM  M    + + +   ++ +  + +   I  + S
Sbjct: 93  GYVKYPNVNMVVEMADMREANRSYEANLQVVRQARELISMTIDLLRS 139



 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 13/106 (12%), Positives = 32/106 (30%), Gaps = 8/106 (7%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQ 54
           Q++  I  +   A   RL  V++N++N  +         +R   V F   +       + 
Sbjct: 7   QSTLKIAASGLSAQSTRLCIVSENIANAQSTAKTADTDPYRRKTVSFRTELEQGTGAAEV 66

Query: 55  KISFVA-SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
           +++ V      ++ +   S  +                  +     
Sbjct: 67  RVAEVGKDTSPFIEQYDPSHPAADARGYVKYPNVNMVVEMADMREA 112


>gi|296135675|ref|YP_003642917.1| flagellar basal-body rod protein FlgC [Thiomonas intermedia K12]
 gi|294339845|emb|CAZ88208.1| Flagellar basal-body rod protein flgC (Putative proximal rod
           protein) [Thiomonas sp. 3As]
 gi|295795797|gb|ADG30587.1| flagellar basal-body rod protein FlgC [Thiomonas intermedia K12]
          Length = 138

 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 7/31 (22%), Positives = 16/31 (51%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
           G++   N N + EM  MI  ++ + +   ++
Sbjct: 93  GYVSYPNVNPVDEMVNMISASRAYQADVNVM 123



 Score = 39.5 bits (90), Expect = 0.48,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 24/47 (51%), Gaps = 6/47 (12%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTD----TVG--FRTIKVKFSE 43
          ++ ++  +   A   RL+ VA N++N +    + G  +R  +V F+ 
Sbjct: 5  SALDVANSGLTAESYRLNVVASNLANANSAVSSNGQPYRAREVVFAA 51


>gi|240145510|ref|ZP_04744111.1| flagellar basal-body rod protein FlgB [Roseburia intestinalis
          L1-82]
 gi|257202325|gb|EEV00610.1| flagellar basal-body rod protein FlgB [Roseburia intestinalis
          L1-82]
 gi|291535999|emb|CBL09111.1| flagellar basal-body rod protein FlgB [Roseburia intestinalis
          M50/1]
 gi|291538493|emb|CBL11604.1| flagellar basal-body rod protein FlgB [Roseburia intestinalis
          XB6B4]
          Length = 131

 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 19/40 (47%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50
          A  A   R + + +N++N DT G++   V F  V+     
Sbjct: 16 AADASWMRENVITNNIANIDTPGYKRQDVDFESVLQKALG 55


>gi|90408066|ref|ZP_01216237.1| flagellar hook-associated protein 1 FlgK [Psychromonas sp. CNPT3]
 gi|90310823|gb|EAS38937.1| flagellar hook-associated protein 1 FlgK [Psychromonas sp. CNPT3]
          Length = 693

 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/201 (12%), Positives = 57/201 (28%), Gaps = 5/201 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M   F IGL+   + +  L+T   N++N +T G+    V   EVV    +          
Sbjct: 1   MADLFQIGLSGIHSSQASLATTGHNIANINTKGYSRQSV---EVVTGGADRYGSNFIGRG 57

Query: 61  SGKEYLSKEVGSFISTGTELDFA--LEGDAWFALESPRGIILTRDGRFKVTDDGSLVSAS 118
           +    + +    F  T   ++ +        F   +    +L+            +  A 
Sbjct: 58  ALVNSIERAYDRFAFTENVMNTSQLAYSKEVFTQTNQIDALLSDSSTSATKPVLEVFKAI 117

Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178
                        Q+  +     + +   +    ++      + +  S   +      ++
Sbjct: 118 NGVADHPNMLESRQVFLESSSNMINQYHRLYDNLEIQYNSINHDITNSAKTLTTLAENVA 177

Query: 179 PNIPPTPLEDLSGVTVKRGFL 199
                      SG   +   L
Sbjct: 178 QLNVQIAAVLGSGGDSRSNDL 198



 Score = 36.0 bits (81), Expect = 5.1,   Method: Composition-based stats.
 Identities = 18/139 (12%), Positives = 43/139 (30%), Gaps = 8/139 (5%)

Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171
           G +        V      P+        +N    G+ S   ++ A  G   ++ ++   +
Sbjct: 555 GKVTFNIAGIDVEMYQGSPLVGDIFSLNYNETGDGDNSNILEMAALQGKKIMNNNKATFQ 614

Query: 172 RENSGISPNIPPTPLEDL----SGVTVKRGFLED----SNANSMYEMGQMIHLTQKFNSI 223
              SG+   I            S   +++   E     S  N   E   ++   Q +++ 
Sbjct: 615 DIYSGMISEIGSRTANADISMKSATILQQQSFERVENVSGVNMDEEAANLLMFQQHYSAA 674

Query: 224 TTLIDENEKSMLEAIRNIA 242
             +I    +     ++ + 
Sbjct: 675 ARVISVAGELFDTILQAVR 693


>gi|23092313|gb|AAN08638.1| FlgC [Aeromonas hydrophila]
          Length = 139

 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 22/43 (51%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           GF+   N N + EM  M + ++ + +   + D  +K + + ++
Sbjct: 93  GFIFKPNVNMVEEMADMTNASRSYQTNVQVADSAKKMLQQTLQ 135



 Score = 36.0 bits (81), Expect = 4.4,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56
            F+I  +A  A   RL+TVA NM+N D+V       +   +  F+  +    +D    +
Sbjct: 5  KVFDIAGSAMSAQSVRLNTVASNMANADSVSSSVENTYHARRPIFAAQLDQAMSDKQASV 64


>gi|117923397|ref|YP_864014.1| flagellar hook-associated protein FlgK [Magnetococcus sp. MC-1]
 gi|117607153|gb|ABK42608.1| flagellar hook-associated protein FlgK [Magnetococcus sp. MC-1]
          Length = 588

 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 28/58 (48%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          +  NI     L+ +  LS+V+ N++N +T G+       +   GA++ + D     VA
Sbjct: 11 SLLNISKTGLLSNQYALSSVSQNIANVNTAGYSRQTAALTSNQGALRGNTDGIGGGVA 68



 Score = 45.6 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 4/37 (10%), Positives = 16/37 (43%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  +   E+  ++   + F + + ++   ++ +   I
Sbjct: 548 SGVSLEEELTDLMRFQRAFQASSKMVVTADELLQSVI 584


>gi|149191159|ref|ZP_01869417.1| putative flagellar hook-associated protein [Vibrio shilonii AK1]
 gi|148834997|gb|EDL51976.1| putative flagellar hook-associated protein [Vibrio shilonii AK1]
          Length = 459

 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/97 (22%), Positives = 33/97 (34%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
             NIGL+  LA    L+T A N +N +T G+    V           +     + V  G 
Sbjct: 3   MVNIGLSGVLANRVALNTTAQNTANVNTPGYSRQVVSLEATSSGNFVNGINLGAGVEVGD 62

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL 100
                E  S        + A    ++F   S    +L
Sbjct: 63  IIRIAEQSSINRLREATESAQYSQSYFDGLSNIENLL 99



 Score = 37.5 bits (85), Expect = 1.5,   Method: Composition-based stats.
 Identities = 6/37 (16%), Positives = 12/37 (32%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  NS  E   M+     + +   +I    +     +
Sbjct: 420 SAVNSDEEAANMLLYLNAYEANMKVISTANQMFQTLL 456


>gi|15895480|ref|NP_348829.1| flagellar hook-associated protein FlgK [Clostridium
          acetobutylicum ATCC 824]
 gi|15025209|gb|AAK80169.1|AE007721_9 Flagellar hook-associated protein FlgK [Clostridium
          acetobutylicum ATCC 824]
 gi|325509627|gb|ADZ21263.1| Flagellar hook-associated protein FlgK [Clostridium
          acetobutylicum EA 2018]
          Length = 634

 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 17/36 (47%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
           NIG++     +Q +     N+SN  T G+   +V 
Sbjct: 8  LNIGVSGLTVNQQAIDVTGHNISNASTDGYSRQRVD 43



 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 6/41 (14%), Positives = 17/41 (41%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
            S  +   EM  +I  +  + +   +I   ++ +   + N+
Sbjct: 592 TSGVSLDEEMTNLIQYSHGYQASAKIISTVDQLLDVVVNNL 632


>gi|329297212|ref|ZP_08254548.1| flagellar basal body rod protein FlgC [Plautia stali symbiont]
          Length = 134

 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/127 (8%), Positives = 43/127 (33%)

Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172
           ++   +G         + +     D   +V          K +      +   + G V+ 
Sbjct: 5   NIFDIAGSAMTAQSQRLNVSASNLDNADSVTGPDGQPYVAKQVIFQTDAAQGAATGGVKV 64

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
                 P       +  + +  ++G+++  N + + E    +  ++ + +   +++  + 
Sbjct: 65  AGVVNDPTPAKLVYDPGNPLADQKGYVKMPNVDVVAETVNTMSASRSYQANVEVLNTVKS 124

Query: 233 SMLEAIR 239
            M++ + 
Sbjct: 125 MMMKTLT 131


>gi|110632658|ref|YP_672866.1| flagellar basal body rod protein FlgC [Mesorhizobium sp. BNC1]
 gi|110283642|gb|ABG61701.1| flagellar basal-body rod protein FlgC [Chelativorans sp. BNC1]
          Length = 139

 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/99 (14%), Positives = 30/99 (30%)

Query: 145 KGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNA 204
            G    + K I+             V        P   P           + G+++  N 
Sbjct: 39  PGGDPYRRKTISFAAELGRGNGGAMVEVSAIARDPAEFPVEYMPGHEAADEFGYVKMPNV 98

Query: 205 NSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           N + EM  M    + + +   ++ +  + +   I  + S
Sbjct: 99  NMLVEMADMREANRGYEANLQVVKQARELISMTIDLLRS 137



 Score = 40.2 bits (92), Expect = 0.26,   Method: Composition-based stats.
 Identities = 12/101 (11%), Positives = 33/101 (32%), Gaps = 8/101 (7%)

Query: 7   IGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQKISFV 59
           I  +   A  +R+  V++N++N  +         +R   + F+  +G        ++S +
Sbjct: 10  IAGSGLAAQSERMRVVSENLANAQSTSEVPGGDPYRRKTISFAAELGRGNGGAMVEVSAI 69

Query: 60  A-SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
           A    E+  + +    +        +         +     
Sbjct: 70  ARDPAEFPVEYMPGHEAADEFGYVKMPNVNMLVEMADMREA 110


>gi|196249402|ref|ZP_03148100.1| flagellar hook-associated protein FlgK [Geobacillus sp. G11MC16]
 gi|196211159|gb|EDY05920.1| flagellar hook-associated protein FlgK [Geobacillus sp. G11MC16]
          Length = 528

 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 16/41 (39%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  +   EM  MI     +N+    I   ++ + + I  + 
Sbjct: 484 SAVSLDEEMMNMIKFQHAYNAAARQITAIDEMLDKIINGMG 524



 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 26/68 (38%), Gaps = 3/68 (4%)

Query: 1  MQTSFN---IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS 57
          M ++F+       A +A +  L T   N++N +T G+   +V+           +++   
Sbjct: 1  MLSTFHGLEAARRAMMAQQAALYTTGHNIANANTEGYTRQRVQLEATTPFPTPGLNRPNI 60

Query: 58 FVASGKEY 65
              G   
Sbjct: 61 PGQMGTGV 68


>gi|30248320|ref|NP_840390.1| flagella basal body rod protein [Nitrosomonas europaea ATCC 19718]
 gi|30138206|emb|CAD84214.1| Flagella basal body rod protein [Nitrosomonas europaea ATCC 19718]
          Length = 134

 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 22/43 (51%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N + EM  M+  ++ + +   +++  +  + +A+ 
Sbjct: 89  GYVTLPNVNVVDEMVNMMSASRSYQNSVDMMNVTKTLLQKALT 131



 Score = 41.4 bits (95), Expect = 0.12,   Method: Composition-based stats.
 Identities = 20/118 (16%), Positives = 41/118 (34%), Gaps = 6/118 (5%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNT----DTVG--FRTIKVKFSEVVGAIKNDIDQKISF 58
           FN+  ++  A  QRL+ VA N++N      + G  +R+ +V F  +          K++ 
Sbjct: 7   FNVAGSSMAAQSQRLNVVASNLANADSATSSTGEAYRSRQVVFRTIDVTADKAKGVKVAG 66

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVS 116
           V +    +            E  +    +     E    +  +R  +  V       +
Sbjct: 67  VVNDPSPMRVVYDPKHPMANEKGYVTLPNVNVVDEMVNMMSASRSYQNSVDMMNVTKT 124


>gi|157373201|ref|YP_001471801.1| flagellar hook-associated protein FlgK [Shewanella sediminis
           HAW-EB3]
 gi|157315575|gb|ABV34673.1| flagellar hook-associated protein FlgK [Shewanella sediminis
           HAW-EB3]
          Length = 457

 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 15/41 (36%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
            S  N   E   +I   Q + +   +I   ++     + +I
Sbjct: 417 TSGVNMDEEAVNLIIYQQSYQANAKVISTADQLFQTILNSI 457



 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 22/43 (51%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44
           +  NIG++   A    L+T ++N++N    G+   +V  S V
Sbjct: 1  MSMLNIGMSGLNASMAALNTTSNNVANAMVPGYSRQQVMMSSV 43


>gi|326319103|ref|YP_004236775.1| flagellar hook-associated protein FlgK [Acidovorax avenae subsp.
          avenae ATCC 19860]
 gi|323375939|gb|ADX48208.1| flagellar hook-associated protein FlgK [Acidovorax avenae subsp.
          avenae ATCC 19860]
          Length = 643

 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 21/51 (41%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
           +  N+G  A LA +  L T   N++N +T G+    +    V G      
Sbjct: 1  MSLLNVGARALLANQVALQTAGHNIANVNTAGYSRQTLSLQTVQGQFTGGG 51



 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 17/149 (11%), Positives = 35/149 (23%), Gaps = 9/149 (6%)

Query: 99  ILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158
             T      +   G  ++  G     D   V   +  +         G  S    +    
Sbjct: 498 AYTPGQPITID--GWEITLKGTPGTGDTVKVGNALDAQYGDAYKRNAGNASAIDALGDVK 555

Query: 159 GLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLED-----SNANSMYEMGQM 213
                 MS G+                       +     LE      +  N   E  ++
Sbjct: 556 MFDDATMSDGYAGLM--AQVGTRMQNAKYASDVSSTISTNLERDRSAVAGVNLDEEAAKL 613

Query: 214 IHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           I   Q + +   ++   +      I+ + 
Sbjct: 614 IQYQQAYQASAKVLQIAQSIFDNLIQTMG 642


>gi|15895433|ref|NP_348782.1| flagellar basal body rod protein FlgC [Clostridium acetobutylicum
           ATCC 824]
 gi|15025157|gb|AAK80122.1|AE007716_11 Flagellar basal body rod protein FlgC [Clostridium acetobutylicum
           ATCC 824]
 gi|325509579|gb|ADZ21215.1| flagellar basal body rod protein FlgC [Clostridium acetobutylicum
           EA 2018]
          Length = 143

 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 22/42 (52%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N N + EM  M+  T+ + +  T +++ +    +A+
Sbjct: 98  GYVAMPNVNILNEMADMMASTRAYEANVTAMNDEKGMYTKAL 139



 Score = 39.1 bits (89), Expect = 0.55,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 16/39 (41%), Gaps = 6/39 (15%)

Query: 11 AQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43
             A   R+ T++ N++N  T     G  +R     F +
Sbjct: 13 GLSAERLRMDTISSNIANISTTRTADGGPYRRKVAVFQD 51


>gi|325567496|ref|ZP_08144163.1| hypothetical protein HMPREF9087_0452 [Enterococcus casseliflavus
          ATCC 12755]
 gi|325158929|gb|EGC71075.1| hypothetical protein HMPREF9087_0452 [Enterococcus casseliflavus
          ATCC 12755]
          Length = 507

 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 19/57 (33%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          S         A +  L T + N++NT+T G+   +V            +      V 
Sbjct: 7  SLGTATRGMTANQAALQTSSHNIANTNTDGYSRQRVNLQAEASYHLAGVGSIGMGVK 63



 Score = 43.3 bits (100), Expect = 0.028,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 14/41 (34%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  +   EM  +I   Q F +   ++    + +   I    
Sbjct: 466 SGVSLNEEMSDVIRFQQGFQANARILSVVSEMLDTLINRTG 506


>gi|257871323|ref|ZP_05650976.1| flagellar hook-associated protein FlgK [Enterococcus gallinarum
          EG2]
 gi|257805487|gb|EEV34309.1| flagellar hook-associated protein FlgK [Enterococcus gallinarum
          EG2]
          Length = 507

 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 19/57 (33%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          S         A +  L T + N++NT+T G+   +V            +      V 
Sbjct: 7  SLGTATRGMTANQAALQTSSHNIANTNTDGYSRQRVNLQAEASYHLAGVGSIGMGVK 63



 Score = 43.3 bits (100), Expect = 0.028,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 14/41 (34%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  +   EM  +I   Q F +   ++    + +   I    
Sbjct: 466 SGVSLNEEMSDVIRFQQGFQANARILSVVSEMLDTLINRTG 506


>gi|257866412|ref|ZP_05646065.1| flagellar hook-associated protein FlgK [Enterococcus
          casseliflavus EC30]
 gi|257873072|ref|ZP_05652725.1| flagellar hook-associated protein FlgK [Enterococcus
          casseliflavus EC10]
 gi|257800370|gb|EEV29398.1| flagellar hook-associated protein FlgK [Enterococcus
          casseliflavus EC30]
 gi|257807236|gb|EEV36058.1| flagellar hook-associated protein FlgK [Enterococcus
          casseliflavus EC10]
          Length = 507

 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 19/57 (33%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          S         A +  L T + N++NT+T G+   +V            +      V 
Sbjct: 7  SLGTATRGMTANQAALQTSSHNIANTNTDGYSRQRVNLQAEASYHLAGVGSIGMGVK 63



 Score = 43.3 bits (100), Expect = 0.028,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 14/41 (34%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  +   EM  +I   Q F +   ++    + +   I    
Sbjct: 466 SGVSLNEEMSDVIRFQQGFQANARILSVVSEMLDTLINRTG 506


>gi|182412250|ref|YP_001817316.1| flagellar basal-body rod protein FlgC [Opitutus terrae PB90-1]
 gi|177839464|gb|ACB73716.1| flagellar basal-body rod protein FlgC [Opitutus terrae PB90-1]
          Length = 139

 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 20/43 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G +   N N  YEM  +I  ++ + +   ++    +  ++ ++
Sbjct: 94  GLVTMPNVNLSYEMVDLITASRAYEANLAVVRNARQMAVKTLQ 136



 Score = 42.9 bits (99), Expect = 0.042,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 30/91 (32%), Gaps = 6/91 (6%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDIDQK 55
           +  +I   A  A + RL  VA N++N  T     G  ++   V F   +   +      
Sbjct: 4  ISGIDITAGALNAQKTRLDMVAQNIANAQTTRTPNGGPYQRQVVSFETELVRREGLSGPA 63

Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEG 86
          +  V        +  G  +      D   +G
Sbjct: 64 LQSVKVANVTADRSPGQQVFNPQHPDAGPDG 94


>gi|161620234|ref|YP_001594120.1| flagellar basal body rod protein FlgC [Brucella canis ATCC 23365]
 gi|254702574|ref|ZP_05164402.1| flagellar basal body rod protein FlgC [Brucella suis bv. 3 str.
           686]
 gi|260568518|ref|ZP_05838987.1| flagellar basal body rod protein [Brucella suis bv. 4 str. 40]
 gi|261753154|ref|ZP_05996863.1| flagellar basal-body rod protein FlgC [Brucella suis bv. 3 str.
           686]
 gi|161337045|gb|ABX63349.1| flagellar basal-body rod protein FlgC [Brucella canis ATCC 23365]
 gi|260155183|gb|EEW90264.1| flagellar basal body rod protein [Brucella suis bv. 4 str. 40]
 gi|261742907|gb|EEY30833.1| flagellar basal-body rod protein FlgC [Brucella suis bv. 3 str.
           686]
          Length = 140

 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 8/47 (17%), Positives = 21/47 (44%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           G+++  N N + EM  M    + + +   ++ +  + +   I  + S
Sbjct: 93  GYVKYPNVNMVVEMADMREANRSYEANLQVVRQARELISMTIDLLRS 139



 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 13/106 (12%), Positives = 32/106 (30%), Gaps = 8/106 (7%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQ 54
           Q++  I  +   A   RL  V++N++N  +         +R   V F   +       + 
Sbjct: 7   QSTLKIAASGLSAQSTRLCIVSENIANAQSTARTADTDPYRRKTVSFRTELEQGTGAAEV 66

Query: 55  KISFVA-SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
           +++ V      ++ +   S  +                  +     
Sbjct: 67  RVAEVGKDTSPFIEQYDPSHPAADARGYVKYPNVNMVVEMADMREA 112


>gi|75675293|ref|YP_317714.1| hypothetical protein Nwi_1100 [Nitrobacter winogradskyi Nb-255]
 gi|74420163|gb|ABA04362.1| Protein of unknown function DUF1078 [Nitrobacter winogradskyi
          Nb-255]
          Length = 622

 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 34/77 (44%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
          ++ +I ++   A +  LS V+ N++N +T G+    +   +VV        + I    + 
Sbjct: 5  SALSIAMSGLRANQAALSIVSGNVANANTPGYVAQTLVQDQVVTGGMGSGVRVIGVNRTL 64

Query: 63 KEYLSKEVGSFISTGTE 79
            Y+  ++ +  + G  
Sbjct: 65 DAYVQSQLRTENAGGAY 81



 Score = 39.1 bits (89), Expect = 0.56,   Method: Composition-based stats.
 Identities = 14/93 (15%), Positives = 31/93 (33%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANS 206
             +  G   A          Q FV  ++   +        + +   T++  F + S  N 
Sbjct: 527 PNTGLGAAAAPFQGTLSSFLQQFVSLQSGAATTARQVAQGQSIVVNTLQEKFDDKSGVNM 586

Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             EM  +I L   + +   ++   +  M   ++
Sbjct: 587 DTEMANLIALQNSYAANAHVMTVVQSMMQTLMQ 619


>gi|257876025|ref|ZP_05655678.1| flagellar hook-associated protein FlgK [Enterococcus
          casseliflavus EC20]
 gi|257810191|gb|EEV39011.1| flagellar hook-associated protein FlgK [Enterococcus
          casseliflavus EC20]
          Length = 507

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 19/57 (33%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          S         A +  L T + N++NT+T G+   +V            +      V 
Sbjct: 7  SLGTATRGMTANQAALQTSSHNIANTNTDGYSRQRVNLQAEASYHLAGVGSIGMGVK 63



 Score = 43.3 bits (100), Expect = 0.028,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 14/41 (34%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  +   EM  +I   Q F +   ++    + +   I    
Sbjct: 466 SGVSLNEEMSDVIRFQQGFQANARILSVVSEMLDTLINRTG 506


>gi|227112527|ref|ZP_03826183.1| flagellar hook-associated protein FlgK [Pectobacterium
          carotovorum subsp. brasiliensis PBR1692]
          Length = 564

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/74 (17%), Positives = 28/74 (37%), Gaps = 2/74 (2%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA--IKNDIDQKISF 58
          M    N  ++     +  LSTV++N+SN    G+        + + +      I   ++ 
Sbjct: 1  MSNLINTAMSGLKGAQVALSTVSNNISNQAVTGYSRQNAILEQAISSSTSAGYIGNGVNV 60

Query: 59 VASGKEYLSKEVGS 72
          V+  ++Y       
Sbjct: 61 VSINRQYNEFITNQ 74


>gi|331005439|ref|ZP_08328818.1| Flagellar basal-body rod protein FlgC [gamma proteobacterium
           IMCC1989]
 gi|330420715|gb|EGG95002.1| Flagellar basal-body rod protein FlgC [gamma proteobacterium
           IMCC1989]
          Length = 144

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 20/46 (43%), Gaps = 1/46 (2%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G +   N N   EM  ++  T+ + +    ++ +  S+ +A   I 
Sbjct: 99  GMVAYPNINPASEMVNLLEATRAYEANVKALNASI-SLAQATLEIG 143



 Score = 35.6 bits (80), Expect = 6.2,   Method: Composition-based stats.
 Identities = 9/30 (30%), Positives = 17/30 (56%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV 32
          + F+I  A     + R+  VA N++N++T 
Sbjct: 5  SIFDISAAGMSVQKARVDVVALNLANSETT 34


>gi|163789653|ref|ZP_02184091.1| flagellar basal-body rod protein FlgB [Carnobacterium sp. AT7]
 gi|159875185|gb|EDP69251.1| flagellar basal-body rod protein FlgB [Carnobacterium sp. AT7]
          Length = 125

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 26/53 (49%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
          M  ++N+   A  A   R   ++ N++N +T G++  KV+F  ++  +     
Sbjct: 1  MDPTYNLMKNALDAASMRQEMISSNIANVNTDGYKVNKVEFESILDNVSKGTT 53


>gi|149375036|ref|ZP_01892809.1| flagellar basal-body rod protein C [Marinobacter algicola DG893]
 gi|149360925|gb|EDM49376.1| flagellar basal-body rod protein C [Marinobacter algicola DG893]
          Length = 149

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 19/43 (44%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N + EM  M+  ++ F     +++  +  M   + 
Sbjct: 103 GYVFYPNVNVVEEMADMMSSSRSFQMNVDIMNSAKSMMQRILT 145



 Score = 40.2 bits (92), Expect = 0.22,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 37/92 (40%), Gaps = 6/92 (6%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56
            F+I  +   A   RL+T A N++N +T        +R  K  F+ +  ++ N   Q +
Sbjct: 5  NIFDIAGSGMTAQSLRLNTTASNIANAETASSSTDQTYRARKPVFAAIQQSMLNPSQQSL 64

Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDA 88
          +F +         V   + +  EL    E D 
Sbjct: 65 AFGSDTGPGAGVRVEGIVESDAELQMRYEPDH 96


>gi|83312926|ref|YP_423190.1| flagellar hook-associated protein [Magnetospirillum magneticum
           AMB-1]
 gi|82947767|dbj|BAE52631.1| Flagellar hook-associated protein [Magnetospirillum magneticum
           AMB-1]
          Length = 858

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/139 (12%), Positives = 37/139 (26%), Gaps = 12/139 (8%)

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           +R      TD G    + G           +              G  +      A++  
Sbjct: 729 SRGSMQYNTDLGKYFLSEGDNTTALALGAAMSSKTDMATAGSLYAGSYTFAEHAAASIAQ 788

Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
            S D             +        +   G  +   F   S  N   E+  MI+  Q +
Sbjct: 789 VSTDA------------AHAKDRQDYQTTLGQALNSQFASTSGVNLDEEVANMINFQQAY 836

Query: 221 NSITTLIDENEKSMLEAIR 239
           ++   +I   ++ +   + 
Sbjct: 837 SASAKVISTLQEMLDTLVN 855



 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 33/79 (41%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
            N  L+  L  ++ L  ++ N+ N +T G+   ++     V A      Q+ +   +  
Sbjct: 6  GLNSALSGLLTNQKGLDVISQNVVNVNTKGYVRKQMTPESRVVAGVGAGVQQGALTRNVD 65

Query: 64 EYLSKEVGSFISTGTELDF 82
          E L +++    ST   LD 
Sbjct: 66 EGLMRDIRRQTSTQGALDV 84


>gi|172058468|ref|YP_001814928.1| flagellar hook-associated protein FlgK [Exiguobacterium sibiricum
           255-15]
 gi|171990989|gb|ACB61911.1| flagellar hook-associated protein FlgK [Exiguobacterium sibiricum
           255-15]
          Length = 509

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 16/41 (39%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  +   EM  MI     +N+    I   ++ + + I  + 
Sbjct: 465 SAVSIDEEMTMMIQYQHAYNAAARNITTVDEMLDKIINGMG 505



 Score = 39.1 bits (89), Expect = 0.49,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 16/40 (40%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
              G  A    +  L +  +N++N  T GF   ++  + 
Sbjct: 7  GIETGRRALTTNQWALQSTGNNIANAGTAGFSRQRLVMAT 46


>gi|224825775|ref|ZP_03698879.1| flagellar basal-body rod protein FlgC [Lutiella nitroferrum 2002]
 gi|224601999|gb|EEG08178.1| flagellar basal-body rod protein FlgC [Lutiella nitroferrum 2002]
          Length = 140

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 6/37 (16%), Positives = 16/37 (43%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            N N + EM  M+  ++ F +   ++   +    + +
Sbjct: 99  PNVNPVEEMTDMMSASRAFQTNVEVLARVKTMQQDLL 135



 Score = 42.2 bits (97), Expect = 0.069,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 38/99 (38%), Gaps = 6/99 (6%)

Query: 7   IGLAAQLALEQRLSTVADNMSNTDT------VGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           I  +A  A   RL+TVA N++N ++        FR  K  F+ V     +D   + + V 
Sbjct: 9   IAGSAMTAQTVRLNTVASNLANAESASGSEGAAFRARKPVFATVYRGADSDGAWQGASVQ 68

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
                 S      +   +      +G+ ++   +P   +
Sbjct: 69  VLDVVKSDSPLRKVHEPSNPLADADGNVFYPNVNPVEEM 107


>gi|307131603|ref|YP_003883619.1| flagellar hook-associated protein flgK [Dickeya dadantii 3937]
 gi|306529132|gb|ADM99062.1| Flagellar hook-associated protein flgK [Dickeya dadantii 3937]
          Length = 640

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 19/39 (48%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39
          M    N G++   A +  LSTV++N+SN    G+     
Sbjct: 1  MSNLINTGMSGLSAAQAALSTVSNNISNQAVTGYSRQNA 39


>gi|241589577|ref|YP_002979602.1| flagellar hook-associated protein FlgK [Ralstonia pickettii 12D]
 gi|240868289|gb|ACS65948.1| flagellar hook-associated protein FlgK [Ralstonia pickettii 12D]
          Length = 641

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 27/71 (38%), Gaps = 3/71 (4%)

Query: 1  MQTSF-NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK--NDIDQKIS 57
          M +S  NIG +        L  +  N++N +T G+   +V  +E         D+ Q  +
Sbjct: 1  MSSSLLNIGASGLRTAGIHLQVIGSNIANVNTPGYSRQEVVQTENPPHYGGVGDLGQGAN 60

Query: 58 FVASGKEYLSK 68
               + Y   
Sbjct: 61 VATVKRIYDQF 71



 Score = 37.5 bits (85), Expect = 1.5,   Method: Composition-based stats.
 Identities = 3/38 (7%), Positives = 12/38 (31%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           S  N   E  +++   + + +   ++          + 
Sbjct: 600 SGVNLDEEAMKLMQYQKAYQASAKVMQTANSLFDTLLS 637


>gi|39936948|ref|NP_949224.1| flagellar basal body rod protein FlgC [Rhodopseudomonas palustris
           CGA009]
 gi|192292776|ref|YP_001993381.1| flagellar basal body rod protein FlgC [Rhodopseudomonas palustris
           TIE-1]
 gi|39650805|emb|CAE29328.1| flagellar basal-body rod protein flgC [Rhodopseudomonas palustris
           CGA009]
 gi|192286525|gb|ACF02906.1| flagellar basal-body rod protein FlgC [Rhodopseudomonas palustris
           TIE-1]
          Length = 141

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 7/47 (14%), Positives = 19/47 (40%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           G ++  N N + EM  M    + + +   +I    + +   +  + +
Sbjct: 95  GNVKYPNVNPVIEMTDMRDAQRSYEANLNVISATRRMIQRTLDILKA 141



 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 9/55 (16%), Positives = 21/55 (38%), Gaps = 7/55 (12%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKN 50
           S  I  +   A   R+  +++N++N D+         +R     F+  +    +
Sbjct: 10 RSMGIATSGLRAQAGRMRVISENVANADSTAQNPGGDPYRRKVPTFTSALDRTLD 64


>gi|89068702|ref|ZP_01156088.1| flagellar basal body rod protein [Oceanicola granulosus HTCC2516]
 gi|89045665|gb|EAR51727.1| flagellar basal body rod protein [Oceanicola granulosus HTCC2516]
          Length = 136

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/119 (9%), Positives = 32/119 (26%)

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                      +     +        G    + K ++   +   +     V+    G   
Sbjct: 14  GMHAQGQRLRIVAENVANADSRGTTPGADPYRRKTVSFEEMIDRESGAALVKVGEIGRDT 73

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
                  +       + GF++  N N++ EM  M    + + +   + +       + +
Sbjct: 74  TDFTLVHDPAHPAADENGFVKVPNVNAIIEMTNMREAARSYEANMNMYEAGRAMRQQIL 132



 Score = 43.7 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 7/51 (13%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTD----TVG---FRTIKVKFSEVVGAIKN 50
          I  +   A  QRL  VA+N++N D    T G   +R   V F E++     
Sbjct: 10 IAASGMHAQGQRLRIVAENVANADSRGTTPGADPYRRKTVSFEEMIDRESG 60


>gi|206603156|gb|EDZ39636.1| Flagellar basal-body rod protein FlgC [Leptospirillum sp. Group II
           '5-way CG']
          Length = 145

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 29/69 (42%), Gaps = 6/69 (8%)

Query: 168 GFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
           G VR          P +P  D      + G++   N + + EM  ++  ++ + S  T +
Sbjct: 77  GMVRDPRPLNRVYDPGSPDAD------RSGYVLRPNVSKLEEMVNLLDASRAYESNLTAL 130

Query: 228 DENEKSMLE 236
           D+ ++   +
Sbjct: 131 DDTKQMARK 139



 Score = 36.4 bits (82), Expect = 4.0,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 21/47 (44%), Gaps = 6/47 (12%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTV-G-----FRTIKVKFSEV 44
          +  I      A   R++ ++ N++N+ +V G     F    V F+ V
Sbjct: 6  AMRIAAGGMEAERVRMNVLSGNLANSQSVHGNPRGVFERRDVIFAAV 52


>gi|317121043|ref|YP_004101046.1| flagellar hook-associated protein FlgK [Thermaerobacter
          marianensis DSM 12885]
 gi|315591023|gb|ADU50319.1| flagellar hook-associated protein FlgK [Thermaerobacter
          marianensis DSM 12885]
          Length = 520

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 6/29 (20%), Positives = 12/29 (41%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKV 39
             A ++ L     N++N +T G+     
Sbjct: 14 GLWAQQRALDVTGHNIANANTEGYSRQVA 42



 Score = 40.2 bits (92), Expect = 0.23,   Method: Composition-based stats.
 Identities = 6/39 (15%), Positives = 13/39 (33%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            +   EM Q+I     + +   L+   +  +   I    
Sbjct: 478 VSLDEEMTQLIRYQHAYAAAARLVTAVDTMLGILIERTG 516


>gi|237753202|ref|ZP_04583682.1| flagellar basal-body rod protein flgc proximal rod protein
           [Helicobacter winghamensis ATCC BAA-430]
 gi|229375469|gb|EEO25560.1| flagellar basal-body rod protein flgc proximal rod protein
           [Helicobacter winghamensis ATCC BAA-430]
          Length = 166

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 18/43 (41%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N + EM  +I  ++ + +   +    +     AI 
Sbjct: 120 GYVAYPNINPVVEMADLIEASKAYQANVAVFQSAKNMASTAIS 162



 Score = 39.9 bits (91), Expect = 0.33,   Method: Composition-based stats.
 Identities = 9/31 (29%), Positives = 18/31 (58%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32
           +SF+I      A  QR++ ++ N++N +T 
Sbjct: 3  LSSFDISGYGLSAQRQRVNLISSNIANANTT 33


>gi|218781795|ref|YP_002433113.1| hypothetical protein Dalk_3959 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218763179|gb|ACL05645.1| Putative flagellar basal body rod protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 117

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 5/40 (12%), Positives = 16/40 (40%)

Query: 199 LEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           +E SN +   E+   I   + + +    +   ++ +   +
Sbjct: 74  VEKSNVDLAQEVTNQILAARGYEANLASVKAFDEMLGSTL 113



 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 23/43 (53%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
          M    N  ++A  A  ++  + A+N +N DT G++  +V  SE
Sbjct: 1  MIAGINASVSALNAYGRKFQSTANNTANIDTDGYKKTRVTMSE 43


>gi|306841051|ref|ZP_07473775.1| flagellar basal-body rod protein FlgC [Brucella sp. BO2]
 gi|306288940|gb|EFM60240.1| flagellar basal-body rod protein FlgC [Brucella sp. BO2]
          Length = 107

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 8/47 (17%), Positives = 21/47 (44%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           G+++  N N + EM  M    + + +   ++ +  + +   I  + S
Sbjct: 60  GYVKYPNVNMVVEMADMREANRSYEANLQVVRQARELISMTIDLLRS 106


>gi|242308880|ref|ZP_04808035.1| flagellar hook-protein FlgK [Helicobacter pullorum MIT 98-5489]
 gi|239524544|gb|EEQ64410.1| flagellar hook-protein FlgK [Helicobacter pullorum MIT 98-5489]
          Length = 609

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/231 (11%), Positives = 67/231 (29%), Gaps = 20/231 (8%)

Query: 8   GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLS 67
           GL    ++  +L+      +N D  G       F +   A  N+     +F  + K    
Sbjct: 395 GLTNMQSILDQLN------ANVDGNGDANASNDFDDRFVATFNN--DTKTFAITSKNPAE 446

Query: 68  KEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMA 127
           +   S    GT    A   + +F       I L     +K             +   +  
Sbjct: 447 EIYISIQDNGTNFAGAFGVNRFFDGNDASNIQL--AQSYKNDPTLI-------HAYREAV 497

Query: 128 SVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE 187
               ++    +     +      +G +            +    +  S           +
Sbjct: 498 DGNFEVANMMQQLQYDKITFTDSEGNIQNETISGYF---RFIASKVASQTESTQITQETK 554

Query: 188 DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           +   V++K+ +   S  +   E+  +I     +++   ++   ++ +   +
Sbjct: 555 EAVYVSIKQEYKAISEVSVDDELVNLIKYQSGYSANAKMVSTIDEMLNTLL 605



 Score = 37.5 bits (85), Expect = 1.4,   Method: Composition-based stats.
 Identities = 6/29 (20%), Positives = 14/29 (48%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTD 30
           +S N         +  + TV++N++N +
Sbjct: 5  LSSLNTPYTGLTGHQVMVDTVSNNIANAN 33


>gi|56460255|ref|YP_155536.1| flagellar basal body protein [Idiomarina loihiensis L2TR]
 gi|56179265|gb|AAV81987.1| Flagellar basal body protein [Idiomarina loihiensis L2TR]
          Length = 134

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/75 (14%), Positives = 26/75 (34%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M     I         QR   +A+N++N DT G++   + F + +   +  ++       
Sbjct: 5  MDKLMGIQQHTLGVRTQRAELIANNIANADTPGYKAKGLDFQQALQQAQRGMENHKMART 64

Query: 61 SGKEYLSKEVGSFIS 75
            + +  +       
Sbjct: 65 HEQHFSVEVKPQGTE 79


>gi|161594054|ref|NP_901379.2| flagellar hook-associated protein FlgK [Chromobacterium violaceum
          ATCC 12472]
          Length = 455

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/85 (14%), Positives = 26/85 (30%), Gaps = 3/85 (3%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
              N  L+   A +  L+T + N++N  T G+    V    +        D   +    
Sbjct: 1  MRMINNALSGAQAAQVALNTASQNIANQQTPGYSRQGVV---LATQAPGAGDPLSAGYGV 57

Query: 62 GKEYLSKEVGSFISTGTELDFALEG 86
              + +    + +       +  G
Sbjct: 58 NVSNVRRFSDDYKNLLQWQAASNVG 82


>gi|124516313|gb|EAY57821.1| Flagellar basal-body rod protein FlgC [Leptospirillum rubarum]
          Length = 145

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 29/69 (42%), Gaps = 6/69 (8%)

Query: 168 GFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
           G VR          P +P  D      + G++   N + + EM  ++  ++ + S  T +
Sbjct: 77  GMVRDPRPLNRVYDPGSPDAD------RSGYVLRPNVSKLEEMVNLLDASRAYESNLTAL 130

Query: 228 DENEKSMLE 236
           D+ ++   +
Sbjct: 131 DDTKQMARK 139



 Score = 36.0 bits (81), Expect = 4.1,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 21/47 (44%), Gaps = 6/47 (12%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTV-G-----FRTIKVKFSEV 44
          +  I      A   R++ +A N++N+ +V G     F    V F+ V
Sbjct: 6  AMRIAAGGMEAERVRMNVLAGNLANSQSVHGNPRGVFERRDVIFAAV 52


>gi|50120645|ref|YP_049812.1| flagellar hook-associated protein FlgK [Pectobacterium
          atrosepticum SCRI1043]
 gi|49611171|emb|CAG74617.1| flagellar hook-associated protein 1 [Pectobacterium atrosepticum
          SCRI1043]
          Length = 568

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/74 (17%), Positives = 28/74 (37%), Gaps = 2/74 (2%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA--IKNDIDQKISF 58
          M    N  ++     +  LSTV++N+SN    G+        + + +      I   ++ 
Sbjct: 1  MSNLINTAMSGLKGAQIALSTVSNNISNQAVTGYSRQNAILEQAISSSTSAGYIGNGVNV 60

Query: 59 VASGKEYLSKEVGS 72
          V+  ++Y       
Sbjct: 61 VSINRQYNEFITNQ 74


>gi|323697478|ref|ZP_08109390.1| flagellar hook-associated protein FlgK [Desulfovibrio sp. ND132]
 gi|323457410|gb|EGB13275.1| flagellar hook-associated protein FlgK [Desulfovibrio desulfuricans
           ND132]
          Length = 711

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/239 (10%), Positives = 51/239 (21%), Gaps = 17/239 (7%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
                   LA    L              F      F+  +  +++  D      A    
Sbjct: 483 IYNASTGLLASSAALD-------------FDGSGGTFNPEIHTLEDVRDAFNRTYAGAIN 529

Query: 65  YLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVL 124
                    +       FA   D              +            +++   Y   
Sbjct: 530 ATIVNNKLRLEAEDGYTFAFGTDTAGLYAGLGLNTFFKGDDANSMAINEKITSDLDYLAT 589

Query: 125 DMASVPIQIPQKDE----IFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
              +   ++   D           +  ++       T     +D   G V    +  +  
Sbjct: 590 GHVNGAGEMNTGDNTTALSMYALREVSVTTSTAFEGTTSQTILDYYNGIVGNVGTDTNRA 649

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
                        +     E S  N   EM  +I     + +   LI   ++ +   + 
Sbjct: 650 QFNQNFYQTLANDLNDRQQEVSGVNLDEEMSDLIRYQASYTAAAKLITTADEMLQTILS 708



 Score = 39.9 bits (91), Expect = 0.30,   Method: Composition-based stats.
 Identities = 9/74 (12%), Positives = 25/74 (33%), Gaps = 2/74 (2%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE--VVGAIKNDIDQKISFVASGKEYLSK 68
          A  A + +L    +N++N +T G+    V   E   +      +   +      + +   
Sbjct: 15 ALFASQAQLQVTGENIANVNTEGYSRRSVNLEEGTYIDYSPGQLGTGVKATEVVRSFDEM 74

Query: 69 EVGSFISTGTELDF 82
              ++   +  + 
Sbjct: 75 VEAMYLQQSSLSNM 88


>gi|307720251|ref|YP_003891391.1| flagellar basal-body rod protein FlgC [Sulfurimonas autotrophica
           DSM 16294]
 gi|306978344|gb|ADN08379.1| flagellar basal-body rod protein FlgC [Sulfurimonas autotrophica
           DSM 16294]
          Length = 164

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 8/45 (17%), Positives = 18/45 (40%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           G++   N N + EM  ++  T+ + +        +     AI  +
Sbjct: 119 GYVAYPNINPVVEMSDLVEATRSYQANVAAFQSAKDMANSAISLL 163



 Score = 39.5 bits (90), Expect = 0.37,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 6/49 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44
            SF+I      A   R++T++ N++N  T     G  +R  +V F  +
Sbjct: 5  LNSFDISGYGLSAQRVRVNTISSNIANAQTTRTDEGGPYRRREVVFKAI 53


>gi|239995128|ref|ZP_04715652.1| flagellar basal-body rod protein FlgB [Alteromonas macleodii ATCC
          27126]
          Length = 144

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/89 (12%), Positives = 32/89 (35%), Gaps = 3/89 (3%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69
          +A     +R+  ++ N++N +T G++   + F++ + +   +        A+        
Sbjct: 14 SALTIRTERMEVISGNLANANTPGYKARDIDFNKAMQSAMREAS---GGTANHASSGMVR 70

Query: 70 VGSFISTGTELDFALEGDAWFALESPRGI 98
                +G     A   D  + + +    
Sbjct: 71 TNDRHLSGNSTSVAANFDMQYRIPTQPDT 99


>gi|150020229|ref|YP_001305583.1| flagellar hook-associated protein FlgK [Thermosipho melanesiensis
          BI429]
 gi|149792750|gb|ABR30198.1| flagellar hook-associated protein FlgK [Thermosipho melanesiensis
          BI429]
          Length = 846

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 21/57 (36%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          + N GL      +  ++ V+ N++N +T GF         +       + Q    + 
Sbjct: 9  ALNTGLLGIYTSKLAMNVVSHNIANANTPGFSRQVPIIRTMPPIPATTLTQPSVPLQ 65



 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 7/39 (17%), Positives = 15/39 (38%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            +   EM  MI     FN+   ++   ++ +   I  + 
Sbjct: 804 VSLDEEMANMIKFQHAFNASARVMTAVDEMIGRVIDKLG 842


>gi|75675326|ref|YP_317747.1| flagellar basal body rod protein FlgC [Nitrobacter winogradskyi
           Nb-255]
 gi|74420196|gb|ABA04395.1| Flagellar basal-body rod protein FlgC [Nitrobacter winogradskyi
           Nb-255]
          Length = 141

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 9/58 (15%), Positives = 21/58 (36%)

Query: 186 LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
            E  +      G ++  N N + EM  M    + + +   +I    + +   +  + S
Sbjct: 84  HEPGNPAADTSGNVKYPNVNPLVEMTDMRDAQRSYEANLNIISATRRMIQRTLDILKS 141



 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/116 (8%), Positives = 33/116 (28%), Gaps = 11/116 (9%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKN---- 50
             S +I  +   A   R+  +++N++N ++         +R     FS  +    +    
Sbjct: 9   MRSMSIATSGLRAQAGRMRVISENIANANSTAQAPGGDPYRRKVPTFSSALDRALDAKVV 68

Query: 51  DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106
            + +     ++ +        +  ++G      +                  +   
Sbjct: 69  TLGRVRPDTSTFRIKHEPGNPAADTSGNVKYPNVNPLVEMTDMRDAQRSYEANLNI 124


>gi|78042758|ref|YP_359838.1| flagellar basal-body rod protein FlgC [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|77994873|gb|ABB13772.1| flagellar basal-body rod protein FlgC [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 138

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/67 (14%), Positives = 23/67 (34%), Gaps = 5/67 (7%)

Query: 172 RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
            +        P  P  D +   VK       N N   E+  ++   + + +  T+ +  +
Sbjct: 73  TKTPYRYVFNPNHPDADPNTGLVK-----YPNVNINDEIVNLLAAQRAYEANVTVFNTAK 127

Query: 232 KSMLEAI 238
               +A+
Sbjct: 128 AMYAKAL 134



 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 32/86 (37%), Gaps = 6/86 (6%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDIDQKI 56
          +SF I  +A  A    L T+ DN++N +T     G  +    V F E++ A        +
Sbjct: 5  SSFQITASALTAHRLWLDTIVDNIANANTTRTPAGGTYNRKDVIFEEILEAKAGFKGGGV 64

Query: 57 SFVASGKEYLSKEVGSFISTGTELDF 82
                ++  +     F     + D 
Sbjct: 65 RVSQIVEDTKTPYRYVFNPNHPDADP 90


>gi|95929883|ref|ZP_01312624.1| Flagellar hook-associated protein [Desulfuromonas acetoxidans DSM
          684]
 gi|95134179|gb|EAT15837.1| Flagellar hook-associated protein [Desulfuromonas acetoxidans DSM
          684]
          Length = 552

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 8/49 (16%), Positives = 20/49 (40%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          + N G  +  A ++ +    +N++N +T G+    V   ++        
Sbjct: 6  ALNTGKTSLFASQKSIEVAGNNIANVNTEGYSRQNVVLGDIPSLEFGGF 54



 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 15/36 (41%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +   EM  +I   + F +   L+   ++ M+  I 
Sbjct: 514 VSIEEEMISLIKFQRGFEASAKLLSTVDELMVTVIN 549


>gi|239815254|ref|YP_002944164.1| flagellar basal-body rod protein FlgC [Variovorax paradoxus S110]
 gi|239801831|gb|ACS18898.1| flagellar basal-body rod protein FlgC [Variovorax paradoxus S110]
          Length = 153

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 23/48 (47%), Gaps = 1/48 (2%)

Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
            G++  +  ++  EM  M+  T+ + +  + ++      L A+ +I S
Sbjct: 105 SGYVAYAAVDTATEMVSMMSATRAYEANVSAMNTARTLALRAL-DIGS 151



 Score = 35.2 bits (79), Expect = 7.2,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 14/34 (41%), Gaps = 2/34 (5%)

Query: 1  MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTV 32
          M    SF I          R+   A N++N +TV
Sbjct: 1  MDYTQSFAISAIGMNIERTRVDVAALNLANANTV 34


>gi|332994156|gb|AEF04211.1| flagellar hook-associated protein FlgK [Alteromonas sp. SN2]
          Length = 709

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 28/58 (48%), Gaps = 2/58 (3%)

Query: 8  GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKF--SEVVGAIKNDIDQKISFVASGK 63
            +   A  + L T ++N++N +T G+   + +   S+V G    + ++ I+  A  +
Sbjct: 10 ATSGVNASSKLLQTTSNNIANVNTPGYVRERTELVNSDVFGVEIGNTERIINVFAQNQ 67


>gi|296124187|ref|YP_003631965.1| flagellar basal-body rod protein FlgC [Planctomyces limnophilus
          DSM 3776]
 gi|296016527|gb|ADG69766.1| flagellar basal-body rod protein FlgC [Planctomyces limnophilus
          DSM 3776]
          Length = 137

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 9/32 (28%), Positives = 18/32 (56%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32
          M  + +I  +  +A   R+ T+A N++N +T 
Sbjct: 1  MFHTLDISTSGLIAQRTRMDTIAGNIANVNTT 32



 Score = 45.2 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 6/46 (13%), Positives = 18/46 (39%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G +   N N + E    +  ++ + +  T ++  +  +    R + 
Sbjct: 92  GKVLYPNINVVTEFVNAMEASRAYEANVTTMEVTKDMIQNTFRLLG 137


>gi|188586845|ref|YP_001918390.1| flagellar hook-associated protein FlgK [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|179351532|gb|ACB85802.1| flagellar hook-associated protein FlgK [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 568

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 19/41 (46%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  +   EM +M+     +N+ + ++   ++S+   I  + 
Sbjct: 524 SGVSMDEEMTKMVQQQHAYNAASRVVTTIDESLDTIINQMG 564



 Score = 35.2 bits (79), Expect = 7.0,   Method: Composition-based stats.
 Identities = 13/90 (14%), Positives = 23/90 (25%), Gaps = 2/90 (2%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
                 A  A    L T   N++N +  G+   K   S           Q +   A   
Sbjct: 7  GMETAKRALFAQRNALDTTGHNIANAERDGYTRQKAHMSATSPYTM--PAQNMPGTAGQI 64

Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALE 93
              +           +D  +  ++ F   
Sbjct: 65 GTGVEVESVERMRDDFIDSQIREESRFKGN 94


>gi|152989404|ref|YP_001349644.1| flagellar hook-associated protein FlgK [Pseudomonas aeruginosa
          PA7]
 gi|150964562|gb|ABR86587.1| flagellar hook-associated protein FlgK [Pseudomonas aeruginosa
          PA7]
          Length = 682

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/52 (19%), Positives = 17/52 (32%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M    +IGL+     +  L+    N++N  T G+          V       
Sbjct: 1  MSDLLSIGLSGLGTSQTWLTVTGHNITNVKTPGYSRQSAIQQTQVPQFSGAG 52


>gi|90415321|ref|ZP_01223255.1| flagellar basal-body rod protein FlgB [marine gamma
          proteobacterium HTCC2207]
 gi|90332644|gb|EAS47814.1| flagellar basal-body rod protein FlgB [marine gamma
          proteobacterium HTCC2207]
          Length = 128

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 30/86 (34%), Gaps = 4/86 (4%)

Query: 1  MQTSFNIGLA----AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56
          M   F+        A     +R+  ++ N++N DT GF+   + F  V+  ++     + 
Sbjct: 1  MMKMFDAAFGIHEKALDLRAKRMEVLSQNIANADTPGFKARDIDFKNVLNNVQQAGSIRT 60

Query: 57 SFVASGKEYLSKEVGSFISTGTELDF 82
          +  A   +  S       +       
Sbjct: 61 THAAHVSQASSAGADMVYTVPFGTSV 86


>gi|71278001|ref|YP_268219.1| flagellar basal-body rod protein FlgB [Colwellia psychrerythraea
           34H]
 gi|71143741|gb|AAZ24214.1| flagellar basal-body rod protein FlgB [Colwellia psychrerythraea
           34H]
          Length = 132

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/108 (14%), Positives = 35/108 (32%), Gaps = 6/108 (5%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
              F +     L   QR   +A N++N DT G++   + F++ +    N           
Sbjct: 6   DKGFQLHTQGMLIRSQRAEVIASNIANADTPGYKAKGLDFNQALAQAAN------KQKMG 59

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109
                 K           +D+ +  +      +   + + R+   K +
Sbjct: 60  MSRTNDKHFDIRTELNNSVDYRVPNNPDTGDGNTVDVQVERNLYLKNS 107


>gi|312792644|ref|YP_004025567.1| flagellar basal-body rod protein flgb [Caldicellulosiruptor
          kristjanssonii 177R1B]
 gi|312179784|gb|ADQ39954.1| flagellar basal-body rod protein FlgB [Caldicellulosiruptor
          kristjanssonii 177R1B]
          Length = 133

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 9/60 (15%), Positives = 21/60 (35%)

Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76
          +R   +++N++N DT G++   + F   +    N  +         +           S 
Sbjct: 20 KRNEIISNNIANADTPGYKVKDLNFEAFLQKSLNQEENLELVTTDERHIKESSSSQDNSI 79


>gi|88858146|ref|ZP_01132788.1| flagellar basal-body rod protein FlgB [Pseudoalteromonas tunicata
          D2]
 gi|88819763|gb|EAR29576.1| flagellar basal-body rod protein FlgB [Pseudoalteromonas tunicata
          D2]
          Length = 134

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 34/75 (45%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
            +F I   A LA  QR   +A N++N DT G++   + F++ + + K+    ++S    
Sbjct: 6  DKAFGIHPNAMLARVQRAEVLASNIANADTPGYKAKDIDFAQALKSAKSAQSSQLSRTHE 65

Query: 62 GKEYLSKEVGSFIST 76
              ++      IS 
Sbjct: 66 KHFSINTSSIDSISQ 80


>gi|121602485|ref|YP_989402.1| flagellar basal body rod protein FlgC [Bartonella bacilliformis
          KC583]
 gi|120614662|gb|ABM45263.1| flagellar basal-body rod protein FlgC [Bartonella bacilliformis
          KC583]
          Length = 137

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/75 (14%), Positives = 23/75 (30%), Gaps = 7/75 (9%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQKISFV 59
          +      A   RL  +A+N++N ++ G       +R   V F   +    +     +  +
Sbjct: 11 VSTTGLGAQSTRLRIIAENLANANSTGRAPGAAPYRRKTVSFETALNPYVDAQGVHVKRI 70

Query: 60 ASGKEYLSKEVGSFI 74
             K           
Sbjct: 71 GVDKAPFIMRYEPGH 85



 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 20/42 (47%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G+++  N N++ EM  M    + + +   +I +    + + I
Sbjct: 92  GYVKYPNVNAVIEMADMREANRSYEANLQVIRQVRDLVSQTI 133


>gi|315125981|ref|YP_004067984.1| LfgB [Pseudoalteromonas sp. SM9913]
 gi|315014495|gb|ADT67833.1| LfgB [Pseudoalteromonas sp. SM9913]
          Length = 124

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/94 (15%), Positives = 36/94 (38%), Gaps = 3/94 (3%)

Query: 11  AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
           +      R   +A N++N DT GF++  V + +++ ++ +   Q      +G +    + 
Sbjct: 14  SMKLRLDRAEIIASNLANVDTPGFKSRDVDYRQIMQSVSSSFSQNRDVDFAGVQTDELKY 73

Query: 71  GSFIS---TGTELDFALEGDAWFALESPRGIILT 101
                    G  ++  +E   + +        LT
Sbjct: 74  RVPYQPSSDGNTVELNIEQAKFASNSMDFQTSLT 107


>gi|157959896|ref|YP_001499930.1| flagellar hook-associated protein FlgK [Shewanella pealeana ATCC
           700345]
 gi|157844896|gb|ABV85395.1| flagellar hook-associated protein FlgK [Shewanella pealeana ATCC
           700345]
          Length = 457

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 15/41 (36%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
            S  N   E   +I   Q + +   +I   ++     + +I
Sbjct: 417 TSGVNMDEEGVNLIIYQQSYQANAKVISTADQLFQTILNSI 457



 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 26/77 (33%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           +  NIG++   A    L+  ++N+SN    G+   +V  S V           +     
Sbjct: 1  MSMLNIGMSGLNASMAALTATSNNVSNAMVPGYSRQQVVMSSVGNGTYGSGSGVMVDGVR 60

Query: 62 GKEYLSKEVGSFISTGT 78
                +    + +T  
Sbjct: 61 RISDQYQVTQQWNATSN 77


>gi|315649834|ref|ZP_07902917.1| flagellar hook-associated protein FlgK [Paenibacillus vortex V453]
 gi|315274808|gb|EFU38189.1| flagellar hook-associated protein FlgK [Paenibacillus vortex V453]
          Length = 552

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/199 (11%), Positives = 64/199 (32%), Gaps = 10/199 (5%)

Query: 51  DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-----ILTRDGR 105
           D +         K  +    G      T  + A  G  +F   +   I      L+++ +
Sbjct: 318 DANNPRKLAVDTKHTVDGLNGLHKLGYTLNEPATTGSDFFVSANGGPITAGNMRLSQNIQ 377

Query: 106 FKVTDDGSLV-SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
             + + G+ + +     P    + V ++      +   G            +   +  + 
Sbjct: 378 SDLKNIGASLRTEMKTNPDGTTSEVVLKGNGGMALLIAGLSERTFSFNPNNSNGAVTDIT 437

Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGF----LEDSNANSMYEMGQMIHLTQKF 220
             +G+++   S +  +         +G  +        L  S+ +   EM  +I     +
Sbjct: 438 NFEGYLQSVISKLGTDSSNAIKMVENGTLLVEHADTLRLSISSVSLDEEMSDLIRFQHAY 497

Query: 221 NSITTLIDENEKSMLEAIR 239
           ++ + ++   ++ + + I 
Sbjct: 498 SASSRVVTTIDEMLDKLIN 516



 Score = 38.7 bits (88), Expect = 0.77,   Method: Composition-based stats.
 Identities = 8/35 (22%), Positives = 16/35 (45%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39
            IG    +A +  ++T   N++N +T G+     
Sbjct: 8  LEIGKRGLIAQQAAINTAGHNVTNANTPGYSRQTT 42


>gi|264676576|ref|YP_003276482.1| flagellar hook-associated protein FlgK [Comamonas testosteroni
          CNB-2]
 gi|262207088|gb|ACY31186.1| flagellar hook-associated protein FlgK [Comamonas testosteroni
          CNB-2]
          Length = 643

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 19/45 (42%)

Query: 8  GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          G  A +A +  L T   N++N +T G+    V F    G    + 
Sbjct: 2  GARALMANQIALQTTGHNIANVNTAGYSRQSVAFQTSAGQNIGNG 46



 Score = 35.2 bits (79), Expect = 8.0,   Method: Composition-based stats.
 Identities = 5/41 (12%), Positives = 15/41 (36%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E  +++   Q + +   ++   +      I+ + 
Sbjct: 602 SGVNLDEEAAKLLQYQQSYQASAKMLQVAQGIFDSVIQAVG 642


>gi|148558590|ref|YP_001257211.1| flagellar basal body rod protein FlgC [Brucella ovis ATCC 25840]
 gi|148369875|gb|ABQ62747.1| flagellar basal-body rod protein FlgC [Brucella ovis ATCC 25840]
          Length = 140

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 8/47 (17%), Positives = 21/47 (44%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           G+++  N N + EM  M    + + +   ++ +  + +   I  + S
Sbjct: 93  GYVKYPNVNMVVEMADMREANRSYEANLQVVRQARELISMTIDLLRS 139



 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 12/106 (11%), Positives = 31/106 (29%), Gaps = 8/106 (7%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQ 54
           Q++  I  +       RL  V++N++N  +         +R   V F   +       + 
Sbjct: 7   QSTLKIAASGLSVQSTRLRIVSENIANAQSTARTADTDPYRRKTVSFRAELEQGTGAAEV 66

Query: 55  KISFVA-SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
           +++ V      ++ +   S  +                  +     
Sbjct: 67  RVAEVGKDTSPFIEQYDPSHPAADARGYVKYPNVNMVVEMADMREA 112


>gi|70729010|ref|YP_258744.1| flagellar hook-associated protein FlgK [Pseudomonas fluorescens
          Pf-5]
 gi|68343309|gb|AAY90915.1| flagellar hook-associated protein FlgK [Pseudomonas fluorescens
          Pf-5]
          Length = 683

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 20/39 (51%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
           +  NIG++   A +  L T  +N++N DT G+   +  
Sbjct: 1  MSLLNIGMSGLAASQTSLMTTGNNIANADTAGYSRQQTV 39


>gi|85715030|ref|ZP_01046015.1| hypothetical protein NB311A_11677 [Nitrobacter sp. Nb-311A]
 gi|85698227|gb|EAQ36099.1| hypothetical protein NB311A_11677 [Nitrobacter sp. Nb-311A]
          Length = 620

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 33/77 (42%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
          ++ +I ++   A +  LS V+ N++N +T G+    +   ++V        + I    + 
Sbjct: 5  SALSIAMSGLRANQAALSIVSGNVANANTPGYVAQTLVQDQIVTGSTGSGVRIIGVSRTL 64

Query: 63 KEYLSKEVGSFISTGTE 79
            Y+  ++ +  +    
Sbjct: 65 DAYVQSQLRTENAGSAY 81



 Score = 37.9 bits (86), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/93 (13%), Positives = 33/93 (35%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANS 206
             +  G   A          Q FV  ++   +        +++   T+++ F  ++  N 
Sbjct: 527 PNTGLGAAAAPFQGTLPSFLQQFVSLQSGAATTAKQVAQGQEIVVNTLQKKFDAEAGVNM 586

Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             EM  +I L   + +   ++   +  M   ++
Sbjct: 587 DTEMANLIALQNSYAANAHVMTVVQSMMQTLLQ 619


>gi|317052131|ref|YP_004113247.1| flagellar hook-associated protein FlgK [Desulfurispirillum indicum
           S5]
 gi|316947215|gb|ADU66691.1| flagellar hook-associated protein FlgK [Desulfurispirillum indicum
           S5]
          Length = 569

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 6/41 (14%), Positives = 16/41 (39%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E+  M+   + F + +  I   ++ +   +  + 
Sbjct: 528 SGVNENEELTNMLKFQRSFEASSRFITTIDRLLDNIVNRMG 568



 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 16/41 (39%), Positives = 22/41 (53%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
           S N+GL+  LA +  L TV  N+SN +T GF   +V    
Sbjct: 5  QSLNVGLSGVLASQSALMTVGHNLSNMNTEGFSRQRVVLQA 45


>gi|154253013|ref|YP_001413837.1| flagellar basal body rod protein FlgC [Parvibaculum lavamentivorans
           DS-1]
 gi|154156963|gb|ABS64180.1| flagellar basal-body rod protein FlgC [Parvibaculum lavamentivorans
           DS-1]
          Length = 139

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/106 (13%), Positives = 30/106 (28%), Gaps = 8/106 (7%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSE-VVGAIKNDID 53
             S  +  +   A   R+  +A+N++N D+         +R   V F + +   I  +  
Sbjct: 7   IKSMMVAASGLKAQSGRMRVIAENIANADSTSRVAGGDPYRRKIVTFEDKLNREIGANTV 66

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
                V    E+  K +    +        +               
Sbjct: 67  SLGRPVLDKTEFQLKYMPGHPAADEAGYVKMPNVNGMVEAMDMREA 112



 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 20/46 (43%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G+++  N N M E   M    + + +   LI  + + + + I  + 
Sbjct: 93  GYVKMPNVNGMVEAMDMREAQRSYEANLNLIQASRRMISQTIDILR 138


>gi|28211332|ref|NP_782276.1| flagellar basal body rod protein FlgC [Clostridium tetani E88]
 gi|28203772|gb|AAO36213.1| flagellar basal-body rod protein flgC [Clostridium tetani E88]
          Length = 143

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 24/46 (52%), Gaps = 1/46 (2%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G++   N N++ E+  +I  T+ + +    I+ ++   ++A+  I 
Sbjct: 98  GYVLMPNVNALNEVADLIAATRSYEANVDAINSSKSMFMKAL-EIG 142



 Score = 40.2 bits (92), Expect = 0.23,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 24/65 (36%), Gaps = 6/65 (9%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSEVVGAIKNDIDQ 54
          M  +  I  +   A   R+ T+A N+ N+  T G     +R     F E +    N    
Sbjct: 3  MFNNMRISASGLSAERLRIDTIASNIVNSRSTRGKNGEPYRRKVAIFQENLTKEINKQTG 62

Query: 55 KISFV 59
          K   V
Sbjct: 63 KREEV 67


>gi|319898635|ref|YP_004158728.1| flagellar basal-body rod protein flgC [Bartonella clarridgeiae
          73]
 gi|319402599|emb|CBI76144.1| Flagellar basal-body rod protein flgC [Bartonella clarridgeiae
          73]
          Length = 138

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/75 (14%), Positives = 25/75 (33%), Gaps = 7/75 (9%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQKISFV 59
          I      A   RL  +A+N++N ++ G       ++   V F   +    +     +  +
Sbjct: 11 IATTGLSAQSTRLRIIAENLANANSTGKSAGARPYQRKTVSFEATLNPYIDAQGVHVKRI 70

Query: 60 ASGKEYLSKEVGSFI 74
          ++ K           
Sbjct: 71 STDKAPFIMRYEPGH 85



 Score = 45.6 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 20/42 (47%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G+++  N NS+ EM  M    + + +   +I +    + + I
Sbjct: 92  GYVKYPNVNSIIEMADMREANRSYEANLQVIRQARDLVSQTI 133


>gi|77165840|ref|YP_344365.1| flagellar basal-body rod protein FlgC [Nitrosococcus oceani ATCC
           19707]
 gi|254433209|ref|ZP_05046717.1| flagellar basal-body rod protein FlgC [Nitrosococcus oceani AFC27]
 gi|76884154|gb|ABA58835.1| Flagellar basal-body rod protein FlgC [Nitrosococcus oceani ATCC
           19707]
 gi|207089542|gb|EDZ66813.1| flagellar basal-body rod protein FlgC [Nitrosococcus oceani AFC27]
          Length = 137

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 24/43 (55%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N NS+ EM  MI  ++ + +   + + +++ +L  ++
Sbjct: 92  GYIFHPNVNSIEEMANMISASRNYENNVEMANTSKQLLLRTLQ 134



 Score = 39.1 bits (89), Expect = 0.59,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 31/87 (35%), Gaps = 6/87 (6%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56
            F+I   A  A   RL+T A N++N D+V       +R  +  F+ ++     +     
Sbjct: 5  KVFDIAGTAMSAQTLRLNTTASNLANADSVSSSIDQTYRARQPVFATLLDKFNPEAPAGG 64

Query: 57 SFVASGKEYLSKEVGSFISTGTELDFA 83
            V    E  +     +       + A
Sbjct: 65 VQVLGVVESGAPLQQEYAPDHPMANEA 91


>gi|218289685|ref|ZP_03493893.1| flagellar hook-associated protein FlgK [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218240142|gb|EED07326.1| flagellar hook-associated protein FlgK [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 487

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 55/202 (27%), Gaps = 9/202 (4%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
             IGL+   A+++  S V +N+ N +T G+        E V  ++      +        
Sbjct: 9   LYIGLSGLQAMQEAESVVGNNIDNANTPGY------AQESVNLVEGHPYPPVPGDGPMIG 62

Query: 65  YLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVL 124
               +  S  S   +  +  +   W   +S   +  T               +S      
Sbjct: 63  GQYGQGVSVQSVTRQDSWFYDRQDW-QNQSTYQMYSTYSSILTQVQGILSEPSSNGIQSA 121

Query: 125 DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT 184
                        +  N   +  +  +G+V+A          Q       S I+      
Sbjct: 122 LDQFFSAWQTLSTDPSNTAARQAVITQGQVLAQTANTVTSQLQTLQSNVLSQINDQFQEL 181

Query: 185 PLEDLSGVTVKRG--FLEDSNA 204
                    V+     +  SN 
Sbjct: 182 EQYAQELSAVQAQIAAISQSNV 203


>gi|242278628|ref|YP_002990757.1| flagellar basal-body rod protein FlgC [Desulfovibrio salexigens DSM
           2638]
 gi|242121522|gb|ACS79218.1| flagellar basal-body rod protein FlgC [Desulfovibrio salexigens DSM
           2638]
          Length = 147

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G +   + N + EM  MI +++ + +    +D  ++    A+R
Sbjct: 100 GIVRYPDINVVEEMVNMITISRSYEANAQAVDSAKRMFNRALR 142



 Score = 39.9 bits (91), Expect = 0.32,   Method: Composition-based stats.
 Identities = 15/123 (12%), Positives = 36/123 (29%), Gaps = 15/123 (12%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVK---------FSEVVGAI 48
           + +IG +   A  + L+ V+ NM+N  T     G  +R   V          F   +   
Sbjct: 6   ALDIGASGLKAQREYLNVVSMNMANAKTTRTAEGGPYRRKSVSMESSPVLSPFETAMNQQ 65

Query: 49  KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
            N   + ++      +    +     +        +       +      ++T    ++ 
Sbjct: 66  LNQQLRGVTVRGIVSDTRPFKEVYEPNHPDADKKGIVRYPDINVVEEMVNMITISRSYEA 125

Query: 109 TDD 111
              
Sbjct: 126 NAQ 128


>gi|182680550|ref|YP_001834696.1| flagellar basal body rod protein FlgC [Beijerinckia indica subsp.
           indica ATCC 9039]
 gi|182636433|gb|ACB97207.1| flagellar basal-body rod protein FlgC [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 138

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/98 (13%), Positives = 31/98 (31%)

Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNAN 205
           G    + K +              V+ ++ G          +  +     +GF++  N N
Sbjct: 41  GANPYQRKTVTFSSEMDRLSGLDLVQIKSIGKDTTPFQREHDPGNPAADDKGFVKRPNVN 100

Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
            + EM  M    + + +   ++ +        I  + S
Sbjct: 101 ILIEMADMREANRSYEANLQVLKQARDLSTMTIDLLRS 138



 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 24/54 (44%), Gaps = 7/54 (12%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKN 50
          S  I  +   A   RL  +++NM+N+++ G       ++   V FS  +  +  
Sbjct: 8  SMKIAGSGLEAQSTRLRVISENMANSESTGTTAGANPYQRKTVTFSSEMDRLSG 61


>gi|329928727|ref|ZP_08282576.1| flagellar hook-associated protein FlgK [Paenibacillus sp. HGF5]
 gi|328937508|gb|EGG33926.1| flagellar hook-associated protein FlgK [Paenibacillus sp. HGF5]
          Length = 523

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/199 (11%), Positives = 63/199 (31%), Gaps = 10/199 (5%)

Query: 51  DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-----ILTRDGR 105
           D +         K  +    G      T  + A  G  +F   +   I      L++  +
Sbjct: 318 DANNPRKLAEDTKHTVDGLNGLHKLGYTLNEPATTGGDFFVSANGGPITAGNMRLSQTIQ 377

Query: 106 FKVTDDGSLV-SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164
             + + G+ + +     P    + V ++      +   G            +   +  + 
Sbjct: 378 SDLKNIGASLRTEMKTNPDGTTSEVVLKGNGGMALLIAGLSERTFSFNPNNSNGAVTDIT 437

Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGF----LEDSNANSMYEMGQMIHLTQKF 220
             +G+++   S +  +         +G  +        L  S+ +   EM  +I     +
Sbjct: 438 NFEGYLQSVISKLGTDSSNAIKMVENGTLLVEHADTLRLSISSVSLDEEMSDLIRFQHAY 497

Query: 221 NSITTLIDENEKSMLEAIR 239
           ++ + ++   ++ + + I 
Sbjct: 498 SASSRVVTTIDEMLDKLIN 516



 Score = 39.5 bits (90), Expect = 0.38,   Method: Composition-based stats.
 Identities = 9/35 (25%), Positives = 16/35 (45%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39
            IG    +A +  L+T   N++N +T G+     
Sbjct: 8  LEIGKRGLIAQQAALNTAGHNVTNANTPGYSRQTT 42


>gi|306846280|ref|ZP_07478841.1| flagellar basal-body rod protein FlgC [Brucella sp. BO1]
 gi|306273275|gb|EFM55144.1| flagellar basal-body rod protein FlgC [Brucella sp. BO1]
          Length = 140

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 8/47 (17%), Positives = 21/47 (44%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           G+++  N N + EM  M    + + +   ++ +  + +   I  + S
Sbjct: 93  GYVKYPNVNMVVEMADMREANRSYEANLQVVRQARELISMTIDLLRS 139



 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/106 (11%), Positives = 32/106 (30%), Gaps = 8/106 (7%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQ 54
           Q++  I  +   A   RL  +++N++N  +         +R   V F   +       + 
Sbjct: 7   QSTLKIAASGLSAQSTRLRIISENIANAQSTARTADADPYRRKTVSFRTELEQGTGAAEV 66

Query: 55  KISFVA-SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
           +++ V      ++ +   S  +                  +     
Sbjct: 67  RVAEVGKDTSPFIEQYDPSHPAADARGYVKYPNVNMVVEMADMREA 112


>gi|297531376|ref|YP_003672651.1| flagellar hook-associated protein FlgK [Geobacillus sp. C56-T3]
 gi|297254628|gb|ADI28074.1| flagellar hook-associated protein FlgK [Geobacillus sp. C56-T3]
          Length = 531

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 17/41 (41%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S+ +   EM  MI     +N+    I   ++ + + I  + 
Sbjct: 487 SSVSLDEEMMNMIKYQHAYNAAARQITVIDEMLDKLINGMG 527



 Score = 46.0 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 22/45 (48%), Gaps = 3/45 (6%)

Query: 1  MQTSFN---IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS 42
          M ++F+         +A +  L T + N++N +T G+   +V+  
Sbjct: 1  MLSTFHGLEAARRGMMAQQAALYTTSHNIANANTEGYTRQRVQLR 45


>gi|239996708|ref|ZP_04717232.1| Flagellar hook-associated protein [Alteromonas macleodii ATCC
           27126]
          Length = 680

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/179 (11%), Positives = 54/179 (30%), Gaps = 1/179 (0%)

Query: 8   GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS-EVVGAIKNDIDQKISFVASGKEYL 66
             +   A  + L T ++N++N +T G+   + +     V  ++    ++I  V +  +  
Sbjct: 10  ATSGVNASSKLLQTTSNNIANVNTPGYVRERTELQNSQVFGVEIGNTERIINVFAQNQLR 69

Query: 67  SKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDM 126
                           A   +   +  +     L+       T      + + +  VL  
Sbjct: 70  RDITSVGELEAFSSKTAAIDNLLASEANSISQGLSEYFAALQTAADDPTNLASRDQVLGK 129

Query: 127 ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185
           +    Q  +    + + ++ E++ +   +       +       R        N    P
Sbjct: 130 SESLYQRMKTLSDYMLEKEEELNLEFTSMVNRANTLIGNIGDLNRNIVIANGNNTSDQP 188


>gi|23016696|ref|ZP_00056449.1| COG1256: Flagellar hook-associated protein [Magnetospirillum
          magnetotacticum MS-1]
          Length = 858

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 33/79 (41%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
            N  ++  L  ++ L  ++ N+ N +T G+   ++     V A      Q+ +   +  
Sbjct: 6  GLNTAVSGLLTNQKGLDVISQNVVNVNTKGYVRKQMTPESRVVAGVGAGVQQGALTRNVD 65

Query: 64 EYLSKEVGSFISTGTELDF 82
          E L +++    ST   LD 
Sbjct: 66 EGLMRDIRRQTSTQGALDV 84



 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 16/139 (11%), Positives = 36/139 (25%), Gaps = 12/139 (8%)

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           +R      +D G    + G           +              G  +      A++  
Sbjct: 729 SRGAMQYNSDLGKYYLSEGDNTTALALGAAMSTKTNMATAGSLYAGSYNFAEHAAASIAQ 788

Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
            S D +    R++                            S  N   E+  MI+  Q +
Sbjct: 789 VSTDAAHSKDRQDYQTTLGQALDKQYAS------------TSGVNLDEEVANMINFQQAY 836

Query: 221 NSITTLIDENEKSMLEAIR 239
           ++   +I   ++ +   + 
Sbjct: 837 SASAKVISTLQEMLDVLVN 855


>gi|254720612|ref|ZP_05182423.1| flagellar basal body rod protein FlgC [Brucella sp. 83/13]
 gi|265985652|ref|ZP_06098387.1| flagellar basal-body rod protein FlgC [Brucella sp. 83/13]
 gi|306838574|ref|ZP_07471411.1| flagellar basal-body rod protein FlgC [Brucella sp. NF 2653]
 gi|264664244|gb|EEZ34505.1| flagellar basal-body rod protein FlgC [Brucella sp. 83/13]
 gi|306406360|gb|EFM62602.1| flagellar basal-body rod protein FlgC [Brucella sp. NF 2653]
          Length = 140

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 8/47 (17%), Positives = 21/47 (44%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           G+++  N N + EM  M    + + +   ++ +  + +   I  + S
Sbjct: 93  GYVKYPNVNMVVEMADMREANRSYEANLQVVRQARELISMTIDLLRS 139



 Score = 46.0 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/106 (12%), Positives = 32/106 (30%), Gaps = 8/106 (7%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQ 54
           Q++  I  +   A   RL  V++N++N  +         +R   V F   +       + 
Sbjct: 7   QSTLKIAASGLSAQSTRLRIVSENIANAQSTARTADADPYRRKTVSFRTELEQGTGAAEV 66

Query: 55  KISFVA-SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
           +++ V      ++ +   S  +                  +     
Sbjct: 67  RVAEVGKDTSPFIEQYDPSHPAADARGYVKYPNVNMVVEMADMREA 112


>gi|319409189|emb|CBI82833.1| Flagellar basal-body rod protein flgC [Bartonella schoenbuchensis
          R1]
          Length = 137

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/75 (14%), Positives = 26/75 (34%), Gaps = 7/75 (9%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQKISFV 59
          +      A   RL  +A+N++N ++ G       +R   V F   +    +    +++ +
Sbjct: 11 VATTGLSAQSMRLRIIAENLANANSTGKSPGASPYRRKTVSFEAALNPHSDAQGVQVTRI 70

Query: 60 ASGKEYLSKEVGSFI 74
           + K           
Sbjct: 71 GNDKAPFIMRYEPGH 85



 Score = 43.3 bits (100), Expect = 0.033,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 20/42 (47%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G+++  N NS+ EM  M    + + +   ++ +    + + I
Sbjct: 92  GYVKYPNVNSIVEMADMREANRSYEANLQVVRQVRDLVSQTI 133


>gi|316932834|ref|YP_004107816.1| flagellar basal-body rod protein FlgC [Rhodopseudomonas palustris
           DX-1]
 gi|315600548|gb|ADU43083.1| flagellar basal-body rod protein FlgC [Rhodopseudomonas palustris
           DX-1]
          Length = 141

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 7/47 (14%), Positives = 19/47 (40%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           G ++  N N + EM  M    + + +   +I    + +   +  + +
Sbjct: 95  GNVKYPNVNPVIEMTDMRDAQRSYEANLNVISATRRMIQRTLDILKA 141



 Score = 43.7 bits (101), Expect = 0.023,   Method: Composition-based stats.
 Identities = 10/59 (16%), Positives = 22/59 (37%), Gaps = 9/59 (15%)

Query: 1  MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKN 50
          M    S  I  +   A   R+  +++N++N D+         +R     F+  +    +
Sbjct: 6  MDFSRSMAIATSGLRAQAGRMRVISENIANADSTAQTAGGDPYRRKVPTFTSALDRSLD 64


>gi|254418692|ref|ZP_05032416.1| flagellar hook-associated protein FlgK [Brevundimonas sp. BAL3]
 gi|196184869|gb|EDX79845.1| flagellar hook-associated protein FlgK [Brevundimonas sp. BAL3]
          Length = 705

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 19/50 (38%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          +  NI  +     + +L   +DN++N  T G+    V  +  V       
Sbjct: 5  SIMNIATSGLQTAQAQLRVTSDNIANVHTPGYVRKTVDQTAAVTQGYGAG 54



 Score = 41.0 bits (94), Expect = 0.14,   Method: Composition-based stats.
 Identities = 8/35 (22%), Positives = 13/35 (37%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            N   E+  M    Q +N+   LI  ++      I
Sbjct: 667 VNMDEELVNMTTFQQAYNASARLIQASKDMYDTLI 701


>gi|17989433|ref|NP_542066.1| flagellar basal body rod protein FlgC [Brucella melitensis bv. 1
           str. 16M]
 gi|62317101|ref|YP_222954.1| flagellar basal body rod protein FlgC [Brucella abortus bv. 1 str.
           9-941]
 gi|83269093|ref|YP_418384.1| flagellar basal body rod protein FlgC [Brucella melitensis biovar
           Abortus 2308]
 gi|163844344|ref|YP_001621999.1| flagellar basal body rod protein FlgC [Brucella suis ATCC 23445]
 gi|189022366|ref|YP_001932107.1| flagellar basal body rod protein FlgC [Brucella abortus S19]
 gi|225628623|ref|ZP_03786657.1| flagellar basal-body rod protein FlgC [Brucella ceti str. Cudo]
 gi|225686010|ref|YP_002733982.1| flagellar basal body rod protein FlgC [Brucella melitensis ATCC
           23457]
 gi|237816663|ref|ZP_04595655.1| flagellar basal-body rod protein FlgC [Brucella abortus str. 2308
           A]
 gi|254691414|ref|ZP_05154668.1| flagellar basal body rod protein FlgC [Brucella abortus bv. 6 str.
           870]
 gi|254695288|ref|ZP_05157116.1| flagellar basal body rod protein FlgC [Brucella abortus bv. 3 str.
           Tulya]
 gi|254698386|ref|ZP_05160214.1| flagellar basal body rod protein FlgC [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254699459|ref|ZP_05161287.1| flagellar basal body rod protein FlgC [Brucella suis bv. 5 str.
           513]
 gi|254706294|ref|ZP_05168122.1| flagellar basal body rod protein FlgC [Brucella pinnipedialis
           M163/99/10]
 gi|254711412|ref|ZP_05173223.1| flagellar basal body rod protein FlgC [Brucella pinnipedialis
           B2/94]
 gi|254712011|ref|ZP_05173822.1| flagellar basal body rod protein FlgC [Brucella ceti M644/93/1]
 gi|254715080|ref|ZP_05176891.1| flagellar basal body rod protein FlgC [Brucella ceti M13/05/1]
 gi|256014940|ref|YP_003104949.1| flagellar basal body rod protein [Brucella microti CCM 4915]
 gi|256029958|ref|ZP_05443572.1| flagellar basal body rod protein FlgC [Brucella pinnipedialis
           M292/94/1]
 gi|256043071|ref|ZP_05446015.1| flagellar basal body rod protein FlgC [Brucella melitensis bv. 1
           str. Rev.1]
 gi|256059610|ref|ZP_05449808.1| flagellar basal body rod protein FlgC [Brucella neotomae 5K33]
 gi|256111945|ref|ZP_05452896.1| flagellar basal body rod protein FlgC [Brucella melitensis bv. 3
           str. Ether]
 gi|256252926|ref|ZP_05458462.1| flagellar basal body rod protein FlgC [Brucella ceti B1/94]
 gi|256256600|ref|ZP_05462136.1| flagellar basal body rod protein FlgC [Brucella abortus bv. 9 str.
           C68]
 gi|256262867|ref|ZP_05465399.1| flagellar basal body rod protein [Brucella melitensis bv. 2 str.
           63/9]
 gi|260544339|ref|ZP_05820160.1| flagellar basal body rod protein [Brucella abortus NCTC 8038]
 gi|260564301|ref|ZP_05834786.1| flagellar basal body rod protein [Brucella melitensis bv. 1 str.
           16M]
 gi|260757028|ref|ZP_05869376.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 6 str.
           870]
 gi|260762844|ref|ZP_05875176.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260882838|ref|ZP_05894452.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 9 str.
           C68]
 gi|261215657|ref|ZP_05929938.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 3 str.
           Tulya]
 gi|261216790|ref|ZP_05931071.1| flagellar basal-body rod protein FlgC [Brucella ceti M13/05/1]
 gi|261220017|ref|ZP_05934298.1| flagellar basal-body rod protein FlgC [Brucella ceti B1/94]
 gi|261313738|ref|ZP_05952935.1| flagellar basal-body rod protein FlgC [Brucella pinnipedialis
           M163/99/10]
 gi|261319020|ref|ZP_05958217.1| flagellar basal-body rod protein FlgC [Brucella pinnipedialis
           B2/94]
 gi|261319657|ref|ZP_05958854.1| flagellar basal-body rod protein FlgC [Brucella ceti M644/93/1]
 gi|261323579|ref|ZP_05962776.1| flagellar basal-body rod protein FlgC [Brucella neotomae 5K33]
 gi|261749910|ref|ZP_05993619.1| flagellar basal-body rod protein FlgC [Brucella suis bv. 5 str.
           513]
 gi|265986977|ref|ZP_06099534.1| flagellar basal-body rod protein FlgC [Brucella pinnipedialis
           M292/94/1]
 gi|265989509|ref|ZP_06102066.1| flagellar basal-body rod protein FlgC [Brucella melitensis bv. 1
           str. Rev.1]
 gi|265993392|ref|ZP_06105949.1| flagellar basal-body rod protein FlgC [Brucella melitensis bv. 3
           str. Ether]
 gi|294853173|ref|ZP_06793845.1| flagellar basal-body rod protein FlgC [Brucella sp. NVSL 07-0026]
 gi|297249956|ref|ZP_06933657.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 5 str.
           B3196]
 gi|17985310|gb|AAL54330.1| flagellar basal-body rod protein flgc [Brucella melitensis bv. 1
           str. 16M]
 gi|62197294|gb|AAX75593.1| FlgC, flagellar basal-body rod rotein FlgC [Brucella abortus bv. 1
           str. 9-941]
 gi|82939367|emb|CAJ12315.1| Flagellar basal body rod protein:Flagellar basal-body rod protein
           FlgC [Brucella melitensis biovar Abortus 2308]
 gi|163675067|gb|ABY39177.1| flagellar basal-body rod protein FlgC [Brucella suis ATCC 23445]
 gi|189020940|gb|ACD73661.1| Flagellar basal body rod protein [Brucella abortus S19]
 gi|225616469|gb|EEH13517.1| flagellar basal-body rod protein FlgC [Brucella ceti str. Cudo]
 gi|225642115|gb|ACO02028.1| flagellar basal-body rod protein FlgC [Brucella melitensis ATCC
           23457]
 gi|237787476|gb|EEP61692.1| flagellar basal-body rod protein FlgC [Brucella abortus str. 2308
           A]
 gi|255997600|gb|ACU49287.1| flagellar basal body rod protein [Brucella microti CCM 4915]
 gi|260097610|gb|EEW81484.1| flagellar basal body rod protein [Brucella abortus NCTC 8038]
 gi|260151944|gb|EEW87037.1| flagellar basal body rod protein [Brucella melitensis bv. 1 str.
           16M]
 gi|260673265|gb|EEX60086.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260677136|gb|EEX63957.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 6 str.
           870]
 gi|260872366|gb|EEX79435.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 9 str.
           C68]
 gi|260917264|gb|EEX84125.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 3 str.
           Tulya]
 gi|260918601|gb|EEX85254.1| flagellar basal-body rod protein FlgC [Brucella ceti B1/94]
 gi|260921879|gb|EEX88447.1| flagellar basal-body rod protein FlgC [Brucella ceti M13/05/1]
 gi|261292347|gb|EEX95843.1| flagellar basal-body rod protein FlgC [Brucella ceti M644/93/1]
 gi|261298243|gb|EEY01740.1| flagellar basal-body rod protein FlgC [Brucella pinnipedialis
           B2/94]
 gi|261299559|gb|EEY03056.1| flagellar basal-body rod protein FlgC [Brucella neotomae 5K33]
 gi|261302764|gb|EEY06261.1| flagellar basal-body rod protein FlgC [Brucella pinnipedialis
           M163/99/10]
 gi|261739663|gb|EEY27589.1| flagellar basal-body rod protein FlgC [Brucella suis bv. 5 str.
           513]
 gi|262764262|gb|EEZ10294.1| flagellar basal-body rod protein FlgC [Brucella melitensis bv. 3
           str. Ether]
 gi|263000178|gb|EEZ12868.1| flagellar basal-body rod protein FlgC [Brucella melitensis bv. 1
           str. Rev.1]
 gi|263092702|gb|EEZ16911.1| flagellar basal body rod protein [Brucella melitensis bv. 2 str.
           63/9]
 gi|264659174|gb|EEZ29435.1| flagellar basal-body rod protein FlgC [Brucella pinnipedialis
           M292/94/1]
 gi|294818828|gb|EFG35828.1| flagellar basal-body rod protein FlgC [Brucella sp. NVSL 07-0026]
 gi|297173825|gb|EFH33189.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 5 str.
           B3196]
 gi|326410333|gb|ADZ67397.1| flagellar basal body rod protein FlgC [Brucella melitensis M28]
 gi|326553625|gb|ADZ88264.1| flagellar basal body rod protein FlgC [Brucella melitensis M5-90]
          Length = 140

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 8/47 (17%), Positives = 21/47 (44%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           G+++  N N + EM  M    + + +   ++ +  + +   I  + S
Sbjct: 93  GYVKYPNVNMVVEMADMREANRSYEANLQVVRQARELISMTIDLLRS 139



 Score = 46.0 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/106 (12%), Positives = 32/106 (30%), Gaps = 8/106 (7%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQ 54
           Q++  I  +   A   RL  V++N++N  +         +R   V F   +       + 
Sbjct: 7   QSTLKIAASGLSAQSTRLRIVSENIANAQSTARTADTDPYRRKTVSFRTELEQGTGAAEV 66

Query: 55  KISFVA-SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
           +++ V      ++ +   S  +                  +     
Sbjct: 67  RVAEVGKDTSPFIEQYDPSHPAADARGYVKYPNVNMVVEMADMREA 112


>gi|220932550|ref|YP_002509458.1| flagellar hook-associated protein FlgK [Halothermothrix orenii H
           168]
 gi|219993860|gb|ACL70463.1| flagellar hook-associated protein FlgK [Halothermothrix orenii H
           168]
          Length = 471

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 17/38 (44%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           S  +   EM  MI   Q +N+   ++ + ++ +   I 
Sbjct: 431 SGVSLDEEMANMIKFQQAYNAAAKMVSKVDEMLNTLIN 468



 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 6/30 (20%), Positives = 13/30 (43%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
          A    ++ L     N++N +T G+   +  
Sbjct: 13 ALQVQKKSLDVTGHNIANANTEGYSRQRAV 42


>gi|222148673|ref|YP_002549630.1| flagellar hook protein [Agrobacterium vitis S4]
 gi|221735659|gb|ACM36622.1| flagellar hook protein [Agrobacterium vitis S4]
          Length = 108

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/96 (15%), Positives = 31/96 (32%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
            N   +  LA + RL+ +A N++N DT G++ +    S     +     +     A+   
Sbjct: 7   LNSATSGMLAQQTRLTNIASNIANADTPGYQRLNTTLSASGSGVAATTTRSTDAPATQDT 66

Query: 65  YLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL 100
                +          +        F   +    +L
Sbjct: 67  SNVDPLREITDMIGAENGLAANAKVFETGADMWDML 102


>gi|294013083|ref|YP_003546543.1| flagellar basal-body rod protein FlgB [Sphingobium japonicum
          UT26S]
 gi|292676413|dbj|BAI97931.1| flagellar basal-body rod protein FlgB [Sphingobium japonicum
          UT26S]
          Length = 122

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 22/51 (43%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
          A     QRLS +A N++N  T G++   + F   +        +  + V+ 
Sbjct: 14 ALALRSQRLSLLASNIANASTPGYKARDIDFESALKEATTRQGKSPADVSQ 64


>gi|308175273|ref|YP_003921978.1| flagellar hook-filament junction [Bacillus amyloliquefaciens DSM
          7]
 gi|307608137|emb|CBI44508.1| flagellar hook-filament junction [Bacillus amyloliquefaciens DSM
          7]
          Length = 505

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 19/40 (47%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
                 A  A +  LSTV++N++N +T G+   +V    
Sbjct: 7  GLETARRALSAQQTALSTVSNNVANANTAGYTRQRVTLQS 46



 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 17/42 (40%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           S  +   EM  MI     +N+   +I   ++   + I  + +
Sbjct: 461 SAVSLDEEMTNMIQFQHAYNAAARIITMQDEIFDKIINGMGT 502


>gi|254731831|ref|ZP_05190409.1| flagellar basal body rod protein FlgC [Brucella abortus bv. 4 str.
           292]
 gi|260759600|ref|ZP_05871948.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 4 str.
           292]
 gi|260669918|gb|EEX56858.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 4 str.
           292]
          Length = 140

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 8/47 (17%), Positives = 21/47 (44%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           G+++  N N + EM  M    + + +   ++ +  + +   I  + S
Sbjct: 93  GYVKYPNVNMVVEMADMREANRSYEANLQVVRQARELISMTIDLLRS 139



 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 12/106 (11%), Positives = 31/106 (29%), Gaps = 8/106 (7%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQ 54
           Q++  I  +       RL  V++N++N  +         +R   V F   +       + 
Sbjct: 7   QSTLKIAASGLSTQSTRLRIVSENIANAQSTARTADTDPYRRKTVSFRTELEQGTGAAEV 66

Query: 55  KISFVA-SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
           +++ V      ++ +   S  +                  +     
Sbjct: 67  RVAEVGKDTSPFIEQYDPSHPAADARGYVKYPNVNMVVEMADMREA 112


>gi|253998491|ref|YP_003050554.1| flagellar basal-body rod protein FlgB [Methylovorus sp. SIP3-4]
 gi|313200566|ref|YP_004039224.1| flagellar basal-body rod protein flgb [Methylovorus sp. MP688]
 gi|253985170|gb|ACT50027.1| flagellar basal-body rod protein FlgB [Methylovorus sp. SIP3-4]
 gi|312439882|gb|ADQ83988.1| flagellar basal-body rod protein FlgB [Methylovorus sp. MP688]
          Length = 142

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 27/69 (39%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69
          +A     QR   +A N++N DT  ++   + F++ +    +  D   S +   K   +  
Sbjct: 13 SALRVRAQRQELIAANIANADTPNYKARDINFNDALNNALSGNDTPGSGLDVSKTSSAHL 72

Query: 70 VGSFISTGT 78
           G   S   
Sbjct: 73 SGDPTSVDY 81


>gi|56421672|ref|YP_148990.1| flagellar hook-associated protein FlgK [Geobacillus kaustophilus
           HTA426]
 gi|56381514|dbj|BAD77422.1| flagellar hook-associated protein 1 (HAP1) [Geobacillus
           kaustophilus HTA426]
          Length = 531

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 17/41 (41%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S+ +   EM  MI     +N+    I   ++ + + I  + 
Sbjct: 487 SSVSLDEEMMNMIKFQHAYNAAARQITVIDEMLDKLINGMG 527



 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 26/68 (38%), Gaps = 3/68 (4%)

Query: 1  MQTSFN---IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS 57
          M ++F+       A +A +  L T   N++N +T G+   +V+           +++   
Sbjct: 1  MLSTFHGLEAARRAMMAQQAALYTTGHNIANANTEGYTRQRVQLKATPPFPTPGLNRPNI 60

Query: 58 FVASGKEY 65
              G   
Sbjct: 61 PGQMGTGV 68


>gi|222084863|ref|YP_002543392.1| flagellar basal-body rod protein [Agrobacterium radiobacter K84]
 gi|221722311|gb|ACM25467.1| flagellar basal-body rod protein [Agrobacterium radiobacter K84]
          Length = 138

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/96 (11%), Positives = 28/96 (29%)

Query: 143 GEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDS 202
              G    + K +              V  +  G          +  +    ++G+++  
Sbjct: 37  DTPGADPYRRKTVTFGAELDRANGVTTVGVKKMGEDTGKFVEQYDPDNPAADQKGYVKMP 96

Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           N N + EM  M    + + +    + +    +   I
Sbjct: 97  NVNILVEMADMREANRSYEANLQTVRQARDLISSTI 132



 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 15/104 (14%), Positives = 32/104 (30%), Gaps = 8/104 (7%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNT----DTVG---FRTIKVKF-SEVVGAIKNDIDQK 55
           +  I  +   A   RL  V++N++N     DT G   +R   V F +E+  A        
Sbjct: 7   ALKIAGSGLEAQSTRLRVVSENIANARSTGDTPGADPYRRKTVTFGAELDRANGVTTVGV 66

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
                   +++ +      +   +    +         +     
Sbjct: 67  KKMGEDTGKFVEQYDPDNPAADQKGYVKMPNVNILVEMADMREA 110


>gi|238924173|ref|YP_002937689.1| hypothetical protein EUBREC_1811 [Eubacterium rectale ATCC 33656]
 gi|238875848|gb|ACR75555.1| hypothetical protein EUBREC_1811 [Eubacterium rectale ATCC 33656]
 gi|291524902|emb|CBK90489.1| flagellar basal-body rod protein FlgB [Eubacterium rectale DSM
          17629]
 gi|291529043|emb|CBK94629.1| flagellar basal-body rod protein FlgB [Eubacterium rectale
          M104/1]
          Length = 128

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 33/78 (42%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A  A  QR + +A+N+SN DT G++   + F  V+         +       +   SK  
Sbjct: 16 AADASYQREAILANNISNVDTPGYKRKDLNFEGVLSQELGRCKHQSLDKKISELDTSKLT 75

Query: 71 GSFISTGTELDFALEGDA 88
           +  +  +   + ++G+ 
Sbjct: 76 ANVYTDHSNYSYRMDGNN 93


>gi|94968682|ref|YP_590730.1| flagellar basal-body rod protein FlgC [Candidatus Koribacter
           versatilis Ellin345]
 gi|94550732|gb|ABF40656.1| flagellar basal-body rod protein FlgC [Candidatus Koribacter
           versatilis Ellin345]
          Length = 145

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 3/45 (6%), Positives = 19/45 (42%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           G +   N + + E   ++   + +    + +   ++ + +++  +
Sbjct: 100 GMVAYPNIDPIEETVDLMSALRSYQLNASAVQAAKQMIQQSLEIL 144



 Score = 35.2 bits (79), Expect = 7.0,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 27/106 (25%), Gaps = 12/106 (11%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE------VVGAIKNDI 52
                 A  A   R   VA NM+N +T     G  +R  +V FS       +V A     
Sbjct: 7   IRTSGGAMAAERLRAEIVAGNMANAETTRTAEGGPYRRKQVIFSSAQPTFGMVLAKAGGE 66

Query: 53  DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98
                 V                     D   EG   +    P   
Sbjct: 67  PAIGGGVRVLDIVQDSRDPVLRYEPGHPDANAEGMVAYPNIDPIEE 112


>gi|323698499|ref|ZP_08110411.1| flagellar basal-body rod protein FlgB [Desulfovibrio sp. ND132]
 gi|323458431|gb|EGB14296.1| flagellar basal-body rod protein FlgB [Desulfovibrio
          desulfuricans ND132]
          Length = 136

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/71 (14%), Positives = 23/71 (32%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
               +R + V  N++N +T G++  +++F E + +  N                     
Sbjct: 16 MDLRLERQNIVTGNIANVNTPGYKARRLEFEERLQSALNQNALGKLTRTQQDHLPIAFDP 75

Query: 72 SFISTGTELDF 82
          +        D 
Sbjct: 76 NGFKGDGIQDL 86


>gi|256158120|ref|ZP_05456038.1| flagellar basal body rod protein FlgC [Brucella ceti M490/95/1]
 gi|265996637|ref|ZP_06109194.1| flagellar basal-body rod protein FlgC [Brucella ceti M490/95/1]
 gi|262550934|gb|EEZ07095.1| flagellar basal-body rod protein FlgC [Brucella ceti M490/95/1]
          Length = 140

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 8/47 (17%), Positives = 21/47 (44%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           G+++  N N + EM  M    + + +   ++ +  + +   I  + S
Sbjct: 93  GYVKYPNVNMVVEMADMREANRSYEANLQVVRQARELISMTIDLLRS 139



 Score = 45.6 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 13/106 (12%), Positives = 32/106 (30%), Gaps = 8/106 (7%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQ 54
           Q++  I  +   A   RL  V++N++N  +         +R   V F   +       + 
Sbjct: 7   QSTLKIAASGLSAQSTRLRIVSENIANAQSTARTADTDPYRRKTVSFRTELEQGTGAAEV 66

Query: 55  KISFVA-SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
           +++ V      ++ +   S  +                  +     
Sbjct: 67  RVAEVGKDTSPFIGQYDPSHPAADARGYVKYPNVNMVVEMADMREA 112


>gi|332704817|ref|ZP_08424905.1| flagellar hook-associated protein FlgK [Desulfovibrio africanus
           str. Walvis Bay]
 gi|332554966|gb|EGJ52010.1| flagellar hook-associated protein FlgK [Desulfovibrio africanus
           str. Walvis Bay]
          Length = 725

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/201 (8%), Positives = 50/201 (24%), Gaps = 3/201 (1%)

Query: 38  KVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG 97
           +  F+++  ++   +   +                      +    L             
Sbjct: 524 RDAFNDMFASMGLAVPADMQASIVNGSLRIASGNGHTFGFGQDSTGLLAGLGINTYFSGT 583

Query: 98  IILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157
              + +    V  + SL++A       ++      I          +    +  G   A 
Sbjct: 584 SARSIEINSAVASNTSLINAGHYNGAGEINEGDNLIASDIAALKDKKLDIHTDFGG-TAH 642

Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217
             L     +       ++  +             +  ++  L  S  N   EM  +I   
Sbjct: 643 QTLSEFYNALVSSVGGDTSSAQFNFSYQNSLAQDLDAQQQSL--SGVNLDEEMSNLIKFQ 700

Query: 218 QKFNSITTLIDENEKSMLEAI 238
             + +   LI   ++ +   +
Sbjct: 701 HSYTAAAKLISTADQMLQTLL 721



 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 24/69 (34%), Gaps = 1/69 (1%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
              +I      A +  +     N+SN +TVG+    V+  E +  +     Q    V +
Sbjct: 5  NNIMDIARKGLFASQAAIEVTGQNISNVNTVGYSRRYVRLEESL-QLDYRPGQIGMGVEA 63

Query: 62 GKEYLSKEV 70
           +     + 
Sbjct: 64 AEVLRHFDR 72


>gi|295696110|ref|YP_003589348.1| flagellar basal-body rod protein FlgB [Bacillus tusciae DSM 2912]
 gi|295411712|gb|ADG06204.1| flagellar basal-body rod protein FlgB [Bacillus tusciae DSM 2912]
          Length = 135

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 23/70 (32%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A  A   R   +ADN++N DT G+    V+F ++             F    + ++    
Sbjct: 15 ALDATALRQKLIADNVANVDTPGYHRQDVRFEDIFAQALAQPAPLAGFRTDPRHFIIGPP 74

Query: 71 GSFISTGTEL 80
                    
Sbjct: 75 PLSQVRPETT 84


>gi|289523318|ref|ZP_06440172.1| flagellar hook-associated protein FlgK [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
 gi|289503010|gb|EFD24174.1| flagellar hook-associated protein FlgK [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
          Length = 825

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 16/39 (41%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            N   EM  ++   Q FN++   I   ++ +   I  + 
Sbjct: 783 VNIDEEMMDIVKFQQAFNAMARYITTIDEMLDTIINRMG 821


>gi|212637791|ref|YP_002314316.1| flagellar hook-associated protein [Shewanella piezotolerans WP3]
 gi|212559275|gb|ACJ31729.1| Flagellar hook-associated protein, putative [Shewanella
          piezotolerans WP3]
          Length = 457

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/88 (13%), Positives = 30/88 (34%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           +  NIG++   A    L+  ++N++N    G+   +V  S V   +       +     
Sbjct: 1  MSMLNIGMSGLNASMAALNATSNNVANAMVPGYSRQQVMMSSVGNGVYGSGAGVMVDGVR 60

Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAW 89
                +    + +T       ++   +
Sbjct: 61 RISDQYEVAQLWNTTSNLGFAKVQSSYF 88



 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 15/41 (36%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
            S  N   E   +I   Q + +   +I   ++     + +I
Sbjct: 417 TSGVNMDEEGTNLIIYQQSYQANAKVISTADQLFQTILNSI 457


>gi|167948872|ref|ZP_02535946.1| Flagellar basal-body rod protein FlgC [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 124

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 20/43 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N + EM  MI  ++ +     +    ++ ++  +R
Sbjct: 79  GYIFRPNVNPVEEMANMISASRSYQGNVEVASAAKQLLMATLR 121



 Score = 36.0 bits (81), Expect = 4.6,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 26/78 (33%), Gaps = 6/78 (7%)

Query: 12 QLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65
            A   RL+ VA NM+N D V       +R  +  F  +V     D       +    E 
Sbjct: 1  MSAQSLRLNLVASNMANVDAVSSSIDETYRARQPVFRAMVDQFNPDAPAVGVSMVGVIES 60

Query: 66 LSKEVGSFISTGTELDFA 83
           +  +  +       D A
Sbjct: 61 QAPLIREYAPDHQMADEA 78


>gi|332994165|gb|AEF04220.1| flagellar basal-body rod protein FlgB [Alteromonas sp. SN2]
          Length = 143

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 9/73 (12%), Positives = 28/73 (38%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69
          +A      R+  ++ N++N +T G++   + F++ + +  +  D +             +
Sbjct: 14 SALAIRTDRMEVISGNLANANTPGYKAKDIDFNKAMESAMSAQDGQHKLGGGSLVRTHDK 73

Query: 70 VGSFISTGTELDF 82
                +    +F
Sbjct: 74 HIGGDVSSVASNF 86


>gi|2275159|gb|AAB81411.1| FlgC [Sinorhizobium meliloti]
          Length = 138

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/99 (14%), Positives = 33/99 (33%)

Query: 145 KGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNA 204
            G    + K I+             V  E  G   +      +  +    ++G ++  N 
Sbjct: 38  PGADPFRRKTISFAAEVDRASGASLVEVERLGTDDSEFNIEFDPGNPAADEKGMVKLPNL 97

Query: 205 NSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           N + EM  M    + + +    I ++   + + I  + +
Sbjct: 98  NILIEMADMREANRAYEANLQTIKQSRDLISQTIDLLRA 136



 Score = 43.7 bits (101), Expect = 0.025,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 21/54 (38%), Gaps = 7/54 (12%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKN 50
          +  +  +   A   RL  V++N++N  + G       FR   + F+  V     
Sbjct: 6  ALKVSASGLQAESTRLRIVSENIANARSTGDAPGADPFRRKTISFAAEVDRASG 59


>gi|170694400|ref|ZP_02885554.1| flagellar hook-associated protein FlgK [Burkholderia graminis
           C4D1M]
 gi|170140823|gb|EDT08997.1| flagellar hook-associated protein FlgK [Burkholderia graminis
           C4D1M]
          Length = 657

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/220 (12%), Positives = 57/220 (25%), Gaps = 9/220 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI---DQKIS 57
           M    N+GL+   A +  L+T   N+SN  T G+      F+E  G             +
Sbjct: 1   MSNLINLGLSGLNAAQWGLTTTGQNISNASTPGYTIETPVFAETGGQYTGSGFLPQGVST 60

Query: 58  FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSA 117
              + +           +  +    A        L +  G                + + 
Sbjct: 61  VTVTRQYSQYLTTQLNNAQSSSSSLATYNSLISQLNNLVGSPTAGLASAITGYFTGMQNV 120

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177
           S     L      +   Q           +     + + T    +V     + ++     
Sbjct: 121 SNNASSLATRQTAMSGAQTLANQINAAGQQYDALRESVNTQLSNTVSQINSYTQQIAQLN 180

Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217
                 +         + +  L  SN      + Q+I + 
Sbjct: 181 GQISAASTQGQPPNQLLDQRDLAVSN------LSQLIGVQ 214



 Score = 36.4 bits (82), Expect = 3.3,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 13/37 (35%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N   E   ++   Q + + + +I   +      +
Sbjct: 617 SGVNINEEAANLLQYQQLYQANSKVIQTAQTLFQTLL 653


>gi|109899405|ref|YP_662660.1| flagellar basal-body rod protein FlgB [Pseudoalteromonas
          atlantica T6c]
 gi|109701686|gb|ABG41606.1| flagellar basal-body rod protein FlgB [Pseudoalteromonas
          atlantica T6c]
          Length = 133

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 9/58 (15%), Positives = 26/58 (44%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIS 75
          R+  +A N++N +T G++   + F + + + +N  +Q ++           +    + 
Sbjct: 22 RMEVLAGNLANANTPGYKARDINFQDAMRSAQNSRNQNLTRTHENHIKGHMQGSGEVQ 79


>gi|254559638|ref|YP_003066733.1| flagellar hook-associated protein 1 FlgK [Methylobacterium
           extorquens DM4]
 gi|254266916|emb|CAX22715.1| putative flagellar hook-associated protein 1 FlgK [Methylobacterium
           extorquens DM4]
          Length = 632

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 27/73 (36%)

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
           QG +  + +  +        + ++  T +  F   S  N   EM  +I L Q + +   +
Sbjct: 559 QGVISVQGAAAAAAQDLDEGQSIALSTAQGRFASASGVNIDEEMSNLIALQQAYAANARV 618

Query: 227 IDENEKSMLEAIR 239
           +      +   +R
Sbjct: 619 LTAARDMIDTLLR 631



 Score = 42.2 bits (97), Expect = 0.068,   Method: Composition-based stats.
 Identities = 7/31 (22%), Positives = 16/31 (51%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGF 34
          +F+   A     + ++  V+ N++N  T G+
Sbjct: 5  AFSTATAGLRVTQAQIGVVSQNIANVGTAGY 35


>gi|218528944|ref|YP_002419760.1| flagellar hook-associated protein FlgK [Methylobacterium
           chloromethanicum CM4]
 gi|218521247|gb|ACK81832.1| flagellar hook-associated protein FlgK [Methylobacterium
           chloromethanicum CM4]
          Length = 632

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 27/73 (36%)

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
           QG +  + +  +        + ++  T +  F   S  N   EM  +I L Q + +   +
Sbjct: 559 QGVISVQGAAAAAAQDLDEGQSIALSTAQGRFASASGVNIDEEMSNLIALQQAYAANARV 618

Query: 227 IDENEKSMLEAIR 239
           +      +   +R
Sbjct: 619 LTAARDMIDTLLR 631



 Score = 42.2 bits (97), Expect = 0.068,   Method: Composition-based stats.
 Identities = 7/31 (22%), Positives = 16/31 (51%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGF 34
          +F+   A     + ++  V+ N++N  T G+
Sbjct: 5  AFSTATAGLRVTQAQIGVVSQNIANVGTAGY 35


>gi|91202526|emb|CAJ72165.1| similar to flagellar basal-body rod protein FlgB [Candidatus
          Kuenenia stuttgartiensis]
          Length = 125

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 8/22 (36%), Positives = 15/22 (68%)

Query: 21 TVADNMSNTDTVGFRTIKVKFS 42
           VA+N++N +T G++ + V F 
Sbjct: 25 VVANNIANVNTPGYKKMVVNFE 46


>gi|307293790|ref|ZP_07573634.1| flagellar basal-body rod protein FlgB [Sphingobium
          chlorophenolicum L-1]
 gi|306879941|gb|EFN11158.1| flagellar basal-body rod protein FlgB [Sphingobium
          chlorophenolicum L-1]
          Length = 122

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 23/51 (45%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
          A     QRLS +A N++N  T G++   + F   +    +   +  + V+ 
Sbjct: 14 ALALRSQRLSLLASNIANASTPGYKARDIDFESALKEATSRQGKSAADVSQ 64


>gi|239828340|ref|YP_002950964.1| flagellar hook-associated protein FlgK [Geobacillus sp. WCH70]
 gi|239808633|gb|ACS25698.1| flagellar hook-associated protein FlgK [Geobacillus sp. WCH70]
          Length = 541

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 20/44 (45%), Gaps = 3/44 (6%)

Query: 1  MQTSFN---IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKF 41
          M ++F+       A +  +  L     N++N +T G+   +V F
Sbjct: 1  MLSTFHGLEAAKRAMMTQQAALYVTGHNVANANTPGYTRQRVNF 44



 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 17/41 (41%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S+ +   EM  MI     +N+    I   ++ + + I  + 
Sbjct: 497 SSVSLDEEMMNMIKFQHAYNAAARQITVVDEMLDKIINGMG 537


>gi|188580158|ref|YP_001923603.1| flagellar hook-associated protein FlgK [Methylobacterium populi
           BJ001]
 gi|179343656|gb|ACB79068.1| flagellar hook-associated protein FlgK [Methylobacterium populi
           BJ001]
          Length = 632

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/120 (13%), Positives = 32/120 (26%)

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                       Q                S    + A       D  QG +  + +  + 
Sbjct: 512 GTASGIGDGARPQALFTALTGTQRLFSSSSGISGINAPTRSSVADFVQGVISVQGAAAAA 571

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
                  + ++  T +  F   S  N   EM  +I L Q + +   ++      +   +R
Sbjct: 572 AQDLDEGQGIALSTAQGRFASASGVNIDQEMSNLIALQQAYAANARVLTAARDMIDTLLR 631



 Score = 42.2 bits (97), Expect = 0.061,   Method: Composition-based stats.
 Identities = 7/31 (22%), Positives = 16/31 (51%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGF 34
          +F+   A     + ++  V+ N++N  T G+
Sbjct: 5  AFSTATAGLRVTQAQIGVVSQNIANVGTAGY 35


>gi|78221659|ref|YP_383406.1| flagellar hook-associated protein [Geobacter metallireducens
          GS-15]
 gi|78192914|gb|ABB30681.1| Flagellar hook-associated protein [Geobacter metallireducens
          GS-15]
          Length = 477

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/80 (12%), Positives = 28/80 (35%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
          Q+  +IG ++ +A    L   ++N++N +T G+       +  +  ++           +
Sbjct: 4  QSILDIGKSSLIAQRLALEVTSENITNVNTPGYSRQTTVLATGITTMERGFPMGTGVKVA 63

Query: 62 GKEYLSKEVGSFISTGTELD 81
            +           +    D
Sbjct: 64 DIQRAYDAFLQSQLSKENTD 83



 Score = 36.8 bits (83), Expect = 2.7,   Method: Composition-based stats.
 Identities = 7/42 (16%), Positives = 16/42 (38%), Gaps = 2/42 (4%)

Query: 199 LEDSN--ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           L +SN   +   E+  ++   + +     LI+     M   +
Sbjct: 432 LRESNSGVSLDEELANLVKYQKAYEGAAKLINVGSDMMDTIL 473


>gi|332140543|ref|YP_004426281.1| flagellar basal-body rod protein FlgB [Alteromonas macleodii str.
          'Deep ecotype']
 gi|327550565|gb|AEA97283.1| flagellar basal-body rod protein FlgB [Alteromonas macleodii str.
          'Deep ecotype']
          Length = 144

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 7/42 (16%), Positives = 24/42 (57%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51
          +A     +R+  ++ N++N +T G++   + F++ + +  ++
Sbjct: 14 SALKIRTERMEVISGNLANANTPGYKARDIDFNKAMQSAMHE 55


>gi|302670716|ref|YP_003830676.1| flagellar basal-body rod protein FlgC [Butyrivibrio proteoclasticus
           B316]
 gi|302395189|gb|ADL34094.1| flagellar basal-body rod protein FlgC [Butyrivibrio proteoclasticus
           B316]
          Length = 149

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 8/46 (17%), Positives = 21/46 (45%), Gaps = 1/46 (2%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G++   N N++ EM  +I  ++ + +  T  D ++      +  + 
Sbjct: 103 GYVTYPNVNTVTEMTNLIDASRSYEANATAFDASKNIAARGL-ELG 147



 Score = 45.2 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 9/29 (31%), Positives = 17/29 (58%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTV 32
          SFNI  +   A   R+  +++N++N +T 
Sbjct: 6  SFNINSSGMTAQRFRMDIISENIANANTT 34


>gi|77918798|ref|YP_356613.1| flagellar basal-body rod protein FlgC [Pelobacter carbinolicus DSM
           2380]
 gi|77544881|gb|ABA88443.1| flagellar basal-body rod protein FlgC [Pelobacter carbinolicus DSM
           2380]
          Length = 143

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 19/42 (45%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G L   N N M E+  M+   + + +  + I   ++   +A+
Sbjct: 98  GMLTLPNINVMEEVVDMMTAMRSYEANISAIKSAQRMATKAL 139



 Score = 43.7 bits (101), Expect = 0.024,   Method: Composition-based stats.
 Identities = 14/124 (11%), Positives = 36/124 (29%), Gaps = 15/124 (12%)

Query: 1   MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G---------FRTIKVKFSEVV 45
           M   T+  +  +A  A   RL+ ++ N++N  T     G         F++ +  F + +
Sbjct: 1   MDIFTAMQVSASALSAQRTRLNVISGNLANVGTTRTPEGGPYRKRDVVFQSSQNMFEDHL 60

Query: 46  GAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGR 105
               +   Q +                        +  +       +      ++T    
Sbjct: 61  QQAMDTNVQGVEVSRIQPNSRDFRTVYQPGHPDADENGMLTLPNINVMEEVVDMMTAMRS 120

Query: 106 FKVT 109
           ++  
Sbjct: 121 YEAN 124


>gi|332799170|ref|YP_004460669.1| flagellar basal-body rod protein FlgB [Tepidanaerobacter sp. Re1]
 gi|332696905|gb|AEE91362.1| flagellar basal-body rod protein FlgB [Tepidanaerobacter sp. Re1]
          Length = 134

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 9/35 (25%), Positives = 21/35 (60%)

Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51
          +R   +++N++N DT G++ + + F E++    N 
Sbjct: 20 KRYELISNNLANVDTPGYKRMGMSFEEILMNSLNQ 54


>gi|217076647|ref|YP_002334363.1| flagellar hook-associated protein 1 [Thermosipho africanus
          TCF52B]
 gi|217036500|gb|ACJ75022.1| flagellar hook-associated protein 1 [Thermosipho africanus
          TCF52B]
          Length = 847

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/86 (13%), Positives = 30/86 (34%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
          + N GL      +  ++ V+ N++N +T GF         +       + Q    +  G 
Sbjct: 9  ALNTGLLGVYTSKLAMNVVSHNIANANTPGFSRQVPIIRTMPPIPATTLTQPSIPLQIGT 68

Query: 64 EYLSKEVGSFISTGTELDFALEGDAW 89
              K++        ++ +    + +
Sbjct: 69 GSKVKDIQRIRDEFLDIQYRQVNNKY 94



 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 7/39 (17%), Positives = 15/39 (38%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            +   EM  MI     FN+   ++   ++ +   I  + 
Sbjct: 805 VSLDEEMANMIKFQHAFNASARVMTAVDEMIGRVIDRLG 843


>gi|302387756|ref|YP_003823578.1| flagellar hook-associated protein FlgK [Clostridium
          saccharolyticum WM1]
 gi|302198384|gb|ADL05955.1| flagellar hook-associated protein FlgK [Clostridium
          saccharolyticum WM1]
          Length = 680

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 30/91 (32%), Gaps = 7/91 (7%)

Query: 1  MQTSFNIGLA----AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56
          M  S   G      A  A ++ L     N++N +T G+   ++   ++V       +   
Sbjct: 1  MTRSTFSGFTIAQLAMSASQRALDVTGQNIANINTKGYTKQQL---DLVSLNLRGGEVVS 57

Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGD 87
          +  AS   Y  +  G        LD      
Sbjct: 58 TGPASKIGYGVEITGISQIRDPFLDVQYRNQ 88



 Score = 41.8 bits (96), Expect = 0.088,   Method: Composition-based stats.
 Identities = 5/41 (12%), Positives = 15/41 (36%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  +   E   ++   + + +   L+   ++ +   I N  
Sbjct: 636 SGVSLDEEGINLMQFQRSYTAAARLMTTLDEVLNVLINNTG 676


>gi|218886714|ref|YP_002436035.1| flagellar hook-associated protein FlgK [Desulfovibrio vulgaris
          str. 'Miyazaki F']
 gi|218757668|gb|ACL08567.1| flagellar hook-associated protein FlgK [Desulfovibrio vulgaris
          str. 'Miyazaki F']
          Length = 690

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/83 (14%), Positives = 27/83 (32%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           + FNIG +A    +  +S  ++N++N D  G+    V+++                  +
Sbjct: 5  NSIFNIGSSALSNAQIGISVTSNNLANADVTGYSRQTVQYTTGPTVSSGGYTYGSGAEVA 64

Query: 62 GKEYLSKEVGSFISTGTELDFAL 84
                             D ++
Sbjct: 65 EITRHFSYTVESQYLSYSSDASM 87


>gi|212639570|ref|YP_002316090.1| flagellar basal body rod protein FlgB [Anoxybacillus flavithermus
          WK1]
 gi|212561050|gb|ACJ34105.1| Flagellar basal body rod protein FlgB [Anoxybacillus flavithermus
          WK1]
          Length = 126

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 9/65 (13%), Positives = 17/65 (26%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
                 +   +A+N++N DT  F+   V+F                            V
Sbjct: 14 GLNYSSLKQKVIANNIANVDTPNFKAKDVQFRTEFHQALQAYRTDPRHFEFKGGTSKFFV 73

Query: 71 GSFIS 75
           +   
Sbjct: 74 TTKND 78


>gi|224532015|ref|ZP_03672647.1| flagellar basal-body rod protein FlgB [Borrelia valaisiana VS116]
 gi|224511480|gb|EEF81886.1| flagellar basal-body rod protein FlgB [Borrelia valaisiana VS116]
          Length = 135

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/32 (31%), Positives = 17/32 (53%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
             L  R S ++DN++N +T  F+  K+ F  
Sbjct: 15 LDVLSLRQSVISDNIANVNTPNFKRSKISFES 46


>gi|147678447|ref|YP_001212662.1| flagellar hook-associated protein FlgK [Pelotomaculum
           thermopropionicum SI]
 gi|146274544|dbj|BAF60293.1| flagellar hook-associated protein [Pelotomaculum thermopropionicum
           SI]
          Length = 471

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 15/41 (36%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  +   EM  +I     +     +I   ++ +   I  +A
Sbjct: 430 SGVSMDEEMTSLIQYQYAYQGAARVITVLDEMLDTLINRMA 470



 Score = 42.9 bits (99), Expect = 0.039,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 15/40 (37%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
          S  I      A +  +     N++N +T GF   +   + 
Sbjct: 8  SLEISRRGLAAGQTGMEVSGHNVANANTPGFTRQRPVLAA 47


>gi|291617018|ref|YP_003519760.1| FlgC [Pantoea ananatis LMG 20103]
 gi|291152048|gb|ADD76632.1| FlgC [Pantoea ananatis LMG 20103]
 gi|327393469|dbj|BAK10891.1| flagellar basal-body rod protein FlgC [Pantoea ananatis AJ13355]
          Length = 134

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 4/43 (9%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G+++  N + + E    +  ++ + +   +++  +  M++ + 
Sbjct: 89  GYVKMPNVDVVAETVNTMSASRSYQANVEVLNTVKSMMMKTLT 131


>gi|291613044|ref|YP_003523201.1| flagellar hook-associated protein FlgK [Sideroxydans
          lithotrophicus ES-1]
 gi|291583156|gb|ADE10814.1| flagellar hook-associated protein FlgK [Sideroxydans
          lithotrophicus ES-1]
          Length = 640

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 24/50 (48%), Gaps = 1/50 (2%)

Query: 4  SFN-IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          S   I ++A  A +  L+T ++N++N +T G+    +  + ++       
Sbjct: 2  SIYGIAVSALNAAQAGLTTTSNNIANANTPGYSRQAIIQAGMLPQNTGSG 51


>gi|229916660|ref|YP_002885306.1| flagellar hook-associated protein FlgK [Exiguobacterium sp. AT1b]
 gi|229468089|gb|ACQ69861.1| flagellar hook-associated protein FlgK [Exiguobacterium sp. AT1b]
          Length = 504

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 16/41 (39%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  +   EM  MI     +N+    I   ++ + + I  + 
Sbjct: 460 SAVSLDEEMTMMIQYQHAYNAAARNITAVDEMLDKIINGMG 500



 Score = 35.6 bits (80), Expect = 5.4,   Method: Composition-based stats.
 Identities = 4/37 (10%), Positives = 12/37 (32%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
                 +    +  L    +N++N    G+   ++ 
Sbjct: 7  GLETARRSLSTHQWALQATGNNVANASNPGYSRQRLT 43


>gi|188991644|ref|YP_001903654.1| flagellar basal body rod protein FlgB [Xanthomonas campestris pv.
           campestris str. B100]
 gi|167733404|emb|CAP51605.1| unnamed protein product [Xanthomonas campestris pv. campestris]
          Length = 224

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 25/55 (45%)

Query: 11  AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65
           A    EQR+  +A N+SN DT G++   + F   + A +   D  +      K Y
Sbjct: 106 ALTLREQRMKLIASNLSNVDTPGYKAKDLNFEAALKAAEGVRDGGLMQATDAKHY 160


>gi|163850384|ref|YP_001638427.1| flagellar hook-associated protein FlgK [Methylobacterium extorquens
           PA1]
 gi|163661989|gb|ABY29356.1| flagellar hook-associated protein FlgK [Methylobacterium extorquens
           PA1]
          Length = 632

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 27/73 (36%)

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
           QG +  + +  +        + ++  T +  F   S  N   EM  +I L Q + +   +
Sbjct: 559 QGVISVQGAAAAAAQDLDEGQSIALSTAQGRFASASGVNIDEEMSNLIALQQAYAANARV 618

Query: 227 IDENEKSMLEAIR 239
           +      +   +R
Sbjct: 619 LTAARDMIDTLLR 631



 Score = 42.2 bits (97), Expect = 0.072,   Method: Composition-based stats.
 Identities = 7/31 (22%), Positives = 16/31 (51%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGF 34
          +F+   A     + ++  V+ N++N  T G+
Sbjct: 5  AFSTATAGLRVTQAQIGVVSQNIANVGTAGY 35


>gi|91794989|ref|YP_564640.1| flagellar hook-associated protein [Shewanella denitrificans OS217]
 gi|91716991|gb|ABE56917.1| Flagellar hook-associated protein [Shewanella denitrificans OS217]
          Length = 457

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 56/216 (25%), Gaps = 7/216 (3%)

Query: 25  NMSNTD-TVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFA 83
           N +N++ ++ F   +  F   VG     +        +  +    E+   ++       A
Sbjct: 246 NPANSNISIQFGKSQFVFENSVGGSMGSLMTYRDTQLANSQTYIDELAQHLANEFNNTLA 305

Query: 84  LEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVG 143
           L  D   A      + +            S  +       LD         +        
Sbjct: 306 LGTDLSGAAPVKNFLSVNSVNPAGSLAISSGFTPEDLALGLDGTQGDNSNLKALAALASK 365

Query: 144 EKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSN 203
             G  S  G V       S+  + G   R+    +        E  S      G      
Sbjct: 366 SLGFTSLGGAVSLGESFSSIVGALGSASRQAKADAKTNTDLHTEAKSQWASTSG------ 419

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            N   E   +I   Q + +   +I   E+     + 
Sbjct: 420 VNPDEEGVNLIVYQQAYQANAKVITTAERLFQTVLN 455



 Score = 40.6 bits (93), Expect = 0.17,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 19/42 (45%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
              NIG +  LA    L+  ++N++N    G+   +V  S 
Sbjct: 1  MNMLNIGKSGLLASAASLNATSNNVANAMVAGYSRQQVMTSS 42


>gi|254504860|ref|ZP_05117011.1| flagellar basal-body rod protein FlgC [Labrenzia alexandrii DFL-11]
 gi|222440931|gb|EEE47610.1| flagellar basal-body rod protein FlgC [Labrenzia alexandrii DFL-11]
          Length = 138

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/97 (11%), Positives = 33/97 (34%)

Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNAN 205
           G+   + K I     ++       V  +  G          +         G+++  N N
Sbjct: 41  GDDPYRRKTITFESEFNRVTQANLVAVKGIGTDKAPFTVEYDPGHPAADVDGYVKMPNVN 100

Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           ++ E+  M    + + +   ++ +  + ++  I  + 
Sbjct: 101 TLMELADMRETNRTYEANLKVMTQAREMVMRHIDLLR 137



 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 25/79 (31%), Gaps = 7/79 (8%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQKIS 57
            I  +   A   R+  V++N++N  + G       +R   + F      +       + 
Sbjct: 9  LQIAASGLKAQSDRMRIVSENLANARSTGEASGDDPYRRKTITFESEFNRVTQANLVAVK 68

Query: 58 FVASGKEYLSKEVGSFIST 76
           + + K   + E       
Sbjct: 69 GIGTDKAPFTVEYDPGHPA 87


>gi|188534172|ref|YP_001907969.1| flagellar basal body rod protein FlgC [Erwinia tasmaniensis Et1/99]
 gi|188029214|emb|CAO97086.1| Cell-proximal portion of basal-body rod [Erwinia tasmaniensis
           Et1/99]
          Length = 134

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 4/43 (9%), Positives = 22/43 (51%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G+++  N + + E    +  ++ + +   +++  ++ M++ + 
Sbjct: 89  GYVKMPNVDVVAETVNTLSASRSYQANVEVLNTVKQMMMKTLT 131



 Score = 34.8 bits (78), Expect = 9.7,   Method: Composition-based stats.
 Identities = 12/31 (38%), Positives = 18/31 (58%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32
             F+I  +A  A  QRL+  A N++N D+V
Sbjct: 4  LNIFDIAGSAMAAQSQRLNVSASNLANADSV 34


>gi|149911696|ref|ZP_01900304.1| Flagellar hook-associated protein [Moritella sp. PE36]
 gi|149805226|gb|EDM65243.1| Flagellar hook-associated protein [Moritella sp. PE36]
          Length = 659

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 21/40 (52%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
          M     IG +  L  ++ L+T  +N+SN +T G+   + +
Sbjct: 1  MANLLQIGTSGVLGHQKMLNTTGNNISNVNTEGYSRQRTQ 40


>gi|269792279|ref|YP_003317183.1| flagellar hook-associated protein FlgK [Thermanaerovibrio
           acidaminovorans DSM 6589]
 gi|269099914|gb|ACZ18901.1| flagellar hook-associated protein FlgK [Thermanaerovibrio
           acidaminovorans DSM 6589]
          Length = 858

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 16/39 (41%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            N   EM  +I   Q FN I   I   ++ + + I  + 
Sbjct: 816 VNMDEEMMDIIKFQQAFNGIARYITTIDEMLDKIINGMG 854



 Score = 36.0 bits (81), Expect = 4.9,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 25/85 (29%), Gaps = 3/85 (3%)

Query: 1  MQTSFN---IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS 57
          M  SF    +G  A     + + T   N+SN +  G+   +V  S         + +   
Sbjct: 1  MLNSFFGFEMGRRAMDYFRRGMETAGHNISNANVEGYSRQRVDASSSPPFTDPGLARPAL 60

Query: 58 FVASGKEYLSKEVGSFISTGTELDF 82
              G       +        +  +
Sbjct: 61 PGQIGTGVQIDAIRRLRDLFLDSQY 85


>gi|329895981|ref|ZP_08271239.1| Flagellar hook-associated protein flgK [gamma proteobacterium
          IMCC3088]
 gi|328922062|gb|EGG29425.1| Flagellar hook-associated protein flgK [gamma proteobacterium
          IMCC3088]
          Length = 1003

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 36/84 (42%), Gaps = 2/84 (2%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--IDQKISF 58
          M    +IG +A     Q ++T ++N+SN +T G+   +VK +E       +  +      
Sbjct: 1  MSDFLSIGASAINVYRQAIATTSNNISNVNTEGYSKQEVKITESYPTQIANYYLGTGAFT 60

Query: 59 VASGKEYLSKEVGSFISTGTELDF 82
           +  + Y      S   + ++LD 
Sbjct: 61 GSVQRSYDEFVERSLRDSASDLDA 84


>gi|138896699|ref|YP_001127152.1| flagellar hook-associated protein FlgK [Geobacillus
           thermodenitrificans NG80-2]
 gi|134268212|gb|ABO68407.1| Flagellar hook-associated protein 1 [Geobacillus
           thermodenitrificans NG80-2]
          Length = 540

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 17/41 (41%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S+ +   EM  MI     +N+    I   ++ + + I  + 
Sbjct: 496 SSVSLDEEMMNMIKFQHAYNAAARQITVVDEMLDKIINGMG 536



 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 26/68 (38%), Gaps = 3/68 (4%)

Query: 1  MQTSFN---IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS 57
          M ++F+       A +A +  L T   N++N +T G+   +V+           +++   
Sbjct: 1  MLSTFHGLEAARRAMMAQQAALYTTGHNIANANTEGYTRQRVQLKATPPFPTPGLNRPNI 60

Query: 58 FVASGKEY 65
              G   
Sbjct: 61 PGQMGTGV 68


>gi|332305612|ref|YP_004433463.1| flagellar basal-body rod protein FlgB [Glaciecola agarilytica
          4H-3-7+YE-5]
 gi|332172941|gb|AEE22195.1| flagellar basal-body rod protein FlgB [Glaciecola agarilytica
          4H-3-7+YE-5]
          Length = 133

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 8/58 (13%), Positives = 26/58 (44%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIS 75
          R+  +A N++N +T G++   + F + + + ++   Q ++         + +    + 
Sbjct: 22 RMEVLAGNLANANTPGYKARDINFQDAMRSAQSGRSQNLTRTHENHIKGNMQGSGEMQ 79


>gi|328958295|ref|YP_004375681.1| flagellar hook-associated protein FlgK [Carnobacterium sp. 17-4]
 gi|328674619|gb|AEB30665.1| flagellar hook-associated protein FlgK [Carnobacterium sp. 17-4]
          Length = 472

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 20/56 (35%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           N         +  L T + N+SN +TVG+   KV            I Q  + V 
Sbjct: 8  LNNATKGLNVQQAALQTTSHNISNANTVGYSRQKVTMVADNPYTLGGIGQLGTGVR 63



 Score = 43.7 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 6/41 (14%), Positives = 13/41 (31%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  +   E+   I     F + + +I    + +   I    
Sbjct: 431 SGVSINEEVTNTIAYQSAFEANSRIISVVSEMLDTLINRTG 471


>gi|297583333|ref|YP_003699113.1| flagellar hook-associated protein FlgK [Bacillus selenitireducens
           MLS10]
 gi|297141790|gb|ADH98547.1| flagellar hook-associated protein FlgK [Bacillus selenitireducens
           MLS10]
          Length = 660

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 16/41 (39%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S+ +   EM  MI     +N+    +   ++ +   I  + 
Sbjct: 616 SSVSLDEEMTMMIQFQHAYNAAARSLTAVDEILDRIINQMG 656



 Score = 43.3 bits (100), Expect = 0.031,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 20/43 (46%), Gaps = 3/43 (6%)

Query: 1  MQTSFN---IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
          M ++F+       A    +  L TV  N++N +T G+   +V 
Sbjct: 1  MLSTFHGLETARKALNTAQTSLHTVGHNIANANTEGYSRQRVN 43


>gi|328555246|gb|AEB25738.1| flagellar hook-associated protein FlgK [Bacillus amyloliquefaciens
           TA208]
 gi|328913607|gb|AEB65203.1| flagellar hook-filament junction [Bacillus amyloliquefaciens LL3]
          Length = 505

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 17/42 (40%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           S  +   EM  MI     +N+   +I   ++   + I  + +
Sbjct: 461 SAVSLDEEMTNMIQFQHAYNAAARIITMQDEIFDKIINGMGT 502



 Score = 46.0 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 19/40 (47%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
                 A  A +  LSTV++N++N +T G+   +V    
Sbjct: 7  GLETARRALSAQQTALSTVSNNVANANTEGYTRQRVTLQS 46


>gi|312879808|ref|ZP_07739608.1| flagellar hook-associated protein FlgK [Aminomonas paucivorans DSM
           12260]
 gi|310783099|gb|EFQ23497.1| flagellar hook-associated protein FlgK [Aminomonas paucivorans DSM
           12260]
          Length = 872

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 15/39 (38%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            N   EM  +I   Q FN     I   ++ + + I  + 
Sbjct: 830 VNMDEEMMDIIKFQQAFNGAARYITTIDEMLDKIINGMG 868



 Score = 37.2 bits (84), Expect = 2.2,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 20/46 (43%), Gaps = 3/46 (6%)

Query: 1  MQTSFN---IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
          M  SF    +G  A     + + T   N++N D  G+   +V+ S 
Sbjct: 1  MINSFFGFEMGRRAMDYFRRGMETAGHNIANADVEGYSRQRVEASS 46


>gi|326792656|ref|YP_004310477.1| flagellar hook-associated protein FlgK [Clostridium lentocellum
          DSM 5427]
 gi|326543420|gb|ADZ85279.1| flagellar hook-associated protein FlgK [Clostridium lentocellum
          DSM 5427]
          Length = 559

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 26/79 (32%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           +S    ++   A ++ L     N+SN +T G+   ++  SE    +  +   +   V  
Sbjct: 4  ISSITKAVSGLAAAQKGLQVTGHNLSNVNTEGYTRQQLLQSESDYLVIGNRGSRYLQVGL 63

Query: 62 GKEYLSKEVGSFISTGTEL 80
          G                 L
Sbjct: 64 GVTQDEIRQIRNELADKRL 82



 Score = 37.2 bits (84), Expect = 2.2,   Method: Composition-based stats.
 Identities = 5/34 (14%), Positives = 12/34 (35%)

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
            E   M+     +N+   +I   +  +   I  +
Sbjct: 526 EEFANMLKYQYAYNASARMITMLDGMLDTIINKM 559


>gi|83944175|ref|ZP_00956631.1| flagellar basal body rod protein [Sulfitobacter sp. EE-36]
 gi|83955124|ref|ZP_00963780.1| flagellar basal body rod protein [Sulfitobacter sp. NAS-14.1]
 gi|83840453|gb|EAP79626.1| flagellar basal body rod protein [Sulfitobacter sp. NAS-14.1]
 gi|83845042|gb|EAP82923.1| flagellar basal body rod protein [Sulfitobacter sp. EE-36]
          Length = 122

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/127 (11%), Positives = 40/127 (31%), Gaps = 6/127 (4%)

Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174
           + A G    +   ++               + +              ++  S G +R + 
Sbjct: 1   MRAQGDRLRIVSENLANASSTAQTAGGDPYQRKTISFESATDPSTGAAIVQSAGVLRDDA 60

Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234
                  P  P  D      + G+++  N N + EM  M    + + +  +++D+     
Sbjct: 61  DFTLRYEPSHPAAD------QNGYIKMPNVNPLIEMSNMREAARSYEANLSMLDKARDMR 114

Query: 235 LEAIRNI 241
            + +  +
Sbjct: 115 RQLVELL 121


>gi|323706357|ref|ZP_08117922.1| flagellar hook-associated protein FlgK [Thermoanaerobacterium
           xylanolyticum LX-11]
 gi|323534319|gb|EGB24105.1| flagellar hook-associated protein FlgK [Thermoanaerobacterium
           xylanolyticum LX-11]
          Length = 478

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 6/41 (14%), Positives = 16/41 (39%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  +   EM  M+   + + +   +I   ++ +   I  + 
Sbjct: 436 SGVSLDEEMANMLKYQKSYEASARMITVMDELLDTLINKMG 476



 Score = 43.3 bits (100), Expect = 0.033,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 19/54 (35%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56
              I      A +Q L+    N+SN +T G+    +  S +       +  + 
Sbjct: 5  QGLEIAKTGLFASQQALNLTGHNISNANTPGYTRQVIDLSAIAPPTTYGMADQW 58


>gi|77359728|ref|YP_339303.1| flagellar hook-associated [Pseudoalteromonas haloplanktis TAC125]
 gi|76874639|emb|CAI85860.1| putative flagellar hook-associated [Pseudoalteromonas
          haloplanktis TAC125]
          Length = 670

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/93 (15%), Positives = 34/93 (36%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
             NI  +   A    L T + N++N +T G+   + +   ++       +         
Sbjct: 4  NLLNIANSGIRANTDLLQTTSKNIANVNTDGYVRERTEHGTMIDNQVGKGNTYRLLNEFA 63

Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESP 95
          ++ L+++  +       +  A   D  F+ E+ 
Sbjct: 64 QKQLNRDTSNKTFFDQFVSEANRVDTLFSQEAN 96


>gi|302874576|ref|YP_003843209.1| flagellar hook-associated protein FlgK [Clostridium cellulovorans
          743B]
 gi|307690813|ref|ZP_07633259.1| flagellar hook-associated protein FlgK [Clostridium cellulovorans
          743B]
 gi|302577433|gb|ADL51445.1| flagellar hook-associated protein FlgK [Clostridium cellulovorans
          743B]
          Length = 579

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 19/39 (48%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
           ++ N       A +  +ST + N++N +T G+   +V 
Sbjct: 5  LSTLNTANKGINAQQTAISTTSHNIANANTEGYSRQRVN 43



 Score = 46.0 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 5/40 (12%), Positives = 15/40 (37%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           S  +   EM  +I     + +   +I   ++ +   +  +
Sbjct: 538 SGVSIDEEMTNLIQFQHAYVANAKVISTVDQLLDVLVNGL 577


>gi|240137460|ref|YP_002961931.1| putative flagellar hook-associated protein 1 FlgK [Methylobacterium
           extorquens AM1]
 gi|240007428|gb|ACS38654.1| putative flagellar hook-associated protein 1 FlgK [Methylobacterium
           extorquens AM1]
          Length = 632

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 29/84 (34%)

Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIH 215
           A       D  QG +  + +  +        + ++  T +  F   S  N   EM  +I 
Sbjct: 548 APTRSSVADFVQGVISVQGAAAAAAQDLDEGQSIALSTAQGRFASASGVNIDEEMSNLIA 607

Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239
           L Q + +   ++      +   +R
Sbjct: 608 LQQAYAANARVLTAARDMIDTLLR 631



 Score = 41.8 bits (96), Expect = 0.081,   Method: Composition-based stats.
 Identities = 7/31 (22%), Positives = 16/31 (51%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGF 34
          +F+   A     + ++  V+ N++N  T G+
Sbjct: 5  AFSTATAGLRVTQAQIGVVSQNIANVGTAGY 35


>gi|21672602|ref|NP_660669.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
 gi|25008458|sp|Q8K9K8|FLGC_BUCAP RecName: Full=Flagellar basal-body rod protein flgC
 gi|21623233|gb|AAM67880.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
          Length = 136

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 5/43 (11%), Positives = 20/43 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++  +N N + E    I  ++ + +   ++   +  +++ + 
Sbjct: 91  GYVLQTNVNPVSETINHISASRSYQANVEVLKTAKSMIMKTLS 133



 Score = 39.9 bits (91), Expect = 0.29,   Method: Composition-based stats.
 Identities = 7/28 (25%), Positives = 15/28 (53%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNT 29
              NI  +A  A  ++++ +A N++N 
Sbjct: 4  LNILNIAGSAMSAQSEKINVIASNLANA 31


>gi|288962707|ref|YP_003453001.1| flagellar basal-body rod protein [Azospirillum sp. B510]
 gi|288914973|dbj|BAI76457.1| flagellar basal-body rod protein [Azospirillum sp. B510]
          Length = 139

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/99 (15%), Positives = 36/99 (36%)

Query: 145 KGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNA 204
           KG    + K ++   +    +    VR +  G   +      +        +G+++  N 
Sbjct: 41  KGGDPYRRKTVSFDSVMDRGVGAELVRVKQIGRDRSDFQLAYDPSHPAADDKGYVKKPNV 100

Query: 205 NSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
             + EM  M    + F +   +I+++   M   +  + S
Sbjct: 101 QPLVEMMDMREAGRAFEASMNVIEQSRAMMTRVVDLLRS 139



 Score = 41.0 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 20/48 (41%), Gaps = 7/48 (14%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVV 45
            I  A   A   RL  VA+N++N D+         +R   V F  V+
Sbjct: 10 LKIAGAGLQAQSTRLRVVAENLANADSTATAKGGDPYRRKTVSFDSVM 57


>gi|325295212|ref|YP_004281726.1| flagellar hook-associated protein FlgK [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325065660|gb|ADY73667.1| flagellar hook-associated protein FlgK [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 451

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 4/39 (10%), Positives = 17/39 (43%)

Query: 200 EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           E S+ N   E+  +    + + +   +++  ++ +   +
Sbjct: 409 ELSSVNMDEELLNLTRYQRAYEAAAKVVNVTDELLQTIL 447



 Score = 37.2 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 28/79 (35%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
          S +I   A L+ +  ++    N+SN  T G+      F+++ G        +  F  +  
Sbjct: 6  SLSIASQALLSNKAAINVTNRNISNVYTDGYSRETPVFADIPGTGVTVETVRRIFNKAYF 65

Query: 64 EYLSKEVGSFISTGTELDF 82
               E  +     +  D 
Sbjct: 66 TRYISENQNNKGLSSYKDI 84


>gi|300311349|ref|YP_003775441.1| Flagellar basal-body rod protein FlgB [Herbaspirillum seropedicae
          SmR1]
 gi|300074134|gb|ADJ63533.1| Flagellar basal-body rod FlgB protein [Herbaspirillum seropedicae
          SmR1]
          Length = 142

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 27/67 (40%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   +A N++N DT  ++   V F++ +    ++    +  +   +   +   
Sbjct: 15 AMNLRAQRQQVLASNIANADTPNYKARDVNFADALKNALDNKATAMPPLELARTAATHVP 74

Query: 71 GSFISTG 77
          G+    G
Sbjct: 75 GTAPENG 81


>gi|167626161|ref|YP_001676455.1| flagellar hook-associated protein FlgK [Shewanella halifaxensis
           HAW-EB4]
 gi|167356183|gb|ABZ78796.1| flagellar hook-associated protein FlgK [Shewanella halifaxensis
           HAW-EB4]
          Length = 457

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 15/41 (36%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
            S  N   E   +I   Q + +   +I   ++     + +I
Sbjct: 417 TSGVNMDEEGVNLIIYQQSYQANAKVISTADQLFQTILNSI 457



 Score = 43.7 bits (101), Expect = 0.024,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 28/79 (35%), Gaps = 4/79 (5%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           +  NIG++   A    L+  ++N++N    G+   +V    ++ ++ N +    S V  
Sbjct: 1  MSMLNIGMSGLNASMAALTATSNNINNAMVPGYSRQQV----MLSSVGNGVYGSGSGVMV 56

Query: 62 GKEYLSKEVGSFISTGTEL 80
                 +           
Sbjct: 57 DGVRRISDQYEVAQLWNTT 75


>gi|15596283|ref|NP_249777.1| flagellar hook-associated protein FlgK [Pseudomonas aeruginosa
          PAO1]
 gi|218892950|ref|YP_002441819.1| flagellar hook-associated protein FlgK [Pseudomonas aeruginosa
          LESB58]
 gi|9947002|gb|AAG04475.1|AE004539_17 flagellar hook-associated protein 1 FlgK [Pseudomonas aeruginosa
          PAO1]
 gi|218773178|emb|CAW28990.1| flagellar hook-associated protein 1 FlgK [Pseudomonas aeruginosa
          LESB58]
          Length = 683

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 9/52 (17%), Positives = 17/52 (32%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M    +IGL+     +  L+    N++N  T G+          +       
Sbjct: 1  MSDLLSIGLSGLGTSQTWLTVTGHNITNVKTPGYSRQDAIQQTRIPQFSGAG 52


>gi|218508323|ref|ZP_03506201.1| probable flagellar basal body rod protein [Rhizobium etli Brasil
          5]
 gi|327191050|gb|EGE58103.1| putative flagellar basal body rod protein [Rhizobium etli
          CNPAF512]
          Length = 100

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/29 (34%), Positives = 18/29 (62%)

Query: 6  NIGLAAQLALEQRLSTVADNMSNTDTVGF 34
          NI L+   A   R+  +A+N++N+ T G+
Sbjct: 8  NIALSGMRAQMTRIGAIANNVANSSTPGY 36



 Score = 37.2 bits (84), Expect = 2.1,   Method: Composition-based stats.
 Identities = 5/33 (15%), Positives = 13/33 (39%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
            S+ +   E+ +MI   Q + +   + +     
Sbjct: 58  TSDVDPATELTEMIEAEQAYKANAAVFETGADM 90


>gi|254234222|ref|ZP_04927545.1| flagellar hook-associated protein 1 FlgK [Pseudomonas aeruginosa
          C3719]
 gi|126166153|gb|EAZ51664.1| flagellar hook-associated protein 1 FlgK [Pseudomonas aeruginosa
          C3719]
          Length = 683

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 9/52 (17%), Positives = 17/52 (32%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M    +IGL+     +  L+    N++N  T G+          +       
Sbjct: 1  MSDLLSIGLSGLGTSQTWLTVTGHNITNVKTPGYSRQDAIQQTRIPQFSGAG 52


>gi|325288761|ref|YP_004264942.1| flagellar hook-associated protein FlgK [Syntrophobotulus glycolicus
           DSM 8271]
 gi|324964162|gb|ADY54941.1| flagellar hook-associated protein FlgK [Syntrophobotulus glycolicus
           DSM 8271]
          Length = 493

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 4/41 (9%), Positives = 16/41 (39%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  +   EM  +I     +++   ++   +  + + +  + 
Sbjct: 450 SGVSIDEEMTNLIKFQTAYSAAARMVTIMDDMLDKVVNGMG 490



 Score = 36.4 bits (82), Expect = 3.6,   Method: Composition-based stats.
 Identities = 12/81 (14%), Positives = 25/81 (30%), Gaps = 1/81 (1%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG-AIKNDIDQKISFVASG 62
             +G  A  A +  L+    N+SN  T G+       +  +   +      +       
Sbjct: 7  GLELGKRALSAQQLALNAAGHNISNASTQGYTRQVANLATTIPDQLYLFGHTQSVGTGVA 66

Query: 63 KEYLSKEVGSFISTGTELDFA 83
             + +   +FI      + A
Sbjct: 67 VATIIRVRDNFIDRQYRWETA 87


>gi|300114801|ref|YP_003761376.1| flagellar basal-body rod protein FlgC [Nitrosococcus watsonii
           C-113]
 gi|299540738|gb|ADJ29055.1| flagellar basal-body rod protein FlgC [Nitrosococcus watsonii
           C-113]
          Length = 137

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 24/43 (55%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N NS+ EM  MI  ++ + +   + + +++ +L  ++
Sbjct: 92  GYIFHPNVNSIEEMANMISASRSYQNNVEMANTSKQLLLRTLQ 134



 Score = 38.3 bits (87), Expect = 0.98,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 31/87 (35%), Gaps = 6/87 (6%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56
            F+I   A  A   RL+T A N++N D+V       +R  +  F+ ++  +        
Sbjct: 5  KVFDIAGTAMSAQTLRLNTTASNLANADSVSSSIHQTYRARQPVFATLLDELNPAAPAGG 64

Query: 57 SFVASGKEYLSKEVGSFISTGTELDFA 83
            V    E  +     +       + A
Sbjct: 65 VQVLGVVESGAPLQQEYAPDHPMANEA 91


>gi|197285504|ref|YP_002151376.1| flagellar hook-associated protein 1 [Proteus mirabilis HI4320]
 gi|194682991|emb|CAR43432.1| flagellar hook-associated protein 1 [Proteus mirabilis HI4320]
          Length = 547

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 19/42 (45%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
              N  ++   A +  +ST+++N++N     +      F+E
Sbjct: 3  NNLINTAMSGLNAAQAAMSTISNNIANQKVNWYNRQMTVFNE 44


>gi|288940415|ref|YP_003442655.1| flagellar hook-associated protein FlgK [Allochromatium vinosum
          DSM 180]
 gi|288895787|gb|ADC61623.1| flagellar hook-associated protein FlgK [Allochromatium vinosum
          DSM 180]
          Length = 723

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 29/79 (36%), Gaps = 3/79 (3%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           +    G+   LA ++ L+T + N+SN  T G+   +V   ++   I   +         
Sbjct: 1  MSVLGTGITGLLAFQRALATTSHNISNAATEGYSRQRV---DLATNIPQRLGSGYIGQGV 57

Query: 62 GKEYLSKEVGSFISTGTEL 80
            + + +    +I      
Sbjct: 58 NVDGIRRLQNDWIDAQLRT 76



 Score = 42.9 bits (99), Expect = 0.037,   Method: Composition-based stats.
 Identities = 14/127 (11%), Positives = 32/127 (25%), Gaps = 6/127 (4%)

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
           + +                 ++ +   G +GE   +G+     G  ++    G   R   
Sbjct: 602 TPAAGDLFTVELGKDRPGDNRNMLEMTGIQGERLIQGRTTLQGGYNTLIADVGTQTRRAQ 661

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
               +                G       N   E   MI   Q + +   +I  + +   
Sbjct: 662 ISRDSSAVQLESAQQQRESLSG------VNLDEEAANMIRFQQAYRAAAQVITTSGEMFD 715

Query: 236 EAIRNIA 242
             +  + 
Sbjct: 716 TLLNAVR 722


>gi|284989559|ref|YP_003408113.1| flagellar basal-body rod protein FlgB [Geodermatophilus obscurus
          DSM 43160]
 gi|284062804|gb|ADB73742.1| flagellar basal-body rod protein FlgB [Geodermatophilus obscurus
          DSM 43160]
          Length = 115

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 27/84 (32%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69
          +A   L QR    ADN++N  T GF   +V F   +           +   +    L   
Sbjct: 12 SALNGLAQRQRVTADNIANLQTPGFLAGRVDFETGLRGALTSGQTPTATTGTVHRSLEPT 71

Query: 70 VGSFISTGTELDFALEGDAWFALE 93
               +   + +  +  +     +
Sbjct: 72 RMDGNNVNLDAETVIATETGLRYQ 95


>gi|254519424|ref|ZP_05131480.1| flagellar basal-body rod protein FlgC [Clostridium sp. 7_2_43FAA]
 gi|226913173|gb|EEH98374.1| flagellar basal-body rod protein FlgC [Clostridium sp. 7_2_43FAA]
          Length = 134

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 6/46 (13%), Positives = 22/46 (47%), Gaps = 1/46 (2%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G++   N N + EM  +I  ++ + +    ++ ++    +++  + 
Sbjct: 89  GYVTMPNVNLLNEMADIIAASRAYEANVDTLNASKSMFTKSL-ELG 133



 Score = 37.9 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 7/30 (23%), Positives = 13/30 (43%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV 32
           +  I  +   A   R+ T+  N++N  T 
Sbjct: 5  NTMRISASGLSAERLRMDTITSNITNATTT 34


>gi|253681456|ref|ZP_04862253.1| flagellar basal-body rod protein FlgB [Clostridium botulinum D
          str. 1873]
 gi|253561168|gb|EES90620.1| flagellar basal-body rod protein FlgB [Clostridium botulinum D
          str. 1873]
          Length = 134

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/70 (17%), Positives = 30/70 (42%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          +  A  +R + + +N++N +T G++   V F + +   K+ +D KI+             
Sbjct: 19 SLKATAKRKNVINNNIANFNTKGYKRSYVTFEDSLKESKDKLDLKITNDKHIAYKKKFGE 78

Query: 71 GSFISTGTEL 80
           +     ++ 
Sbjct: 79 INVKKDESDS 88


>gi|225871925|ref|YP_002753379.1| flagellar basal-body rod protein FlgC [Acidobacterium capsulatum
           ATCC 51196]
 gi|225793067|gb|ACO33157.1| flagellar basal-body rod protein FlgC [Acidobacterium capsulatum
           ATCC 51196]
          Length = 165

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 7/49 (14%), Positives = 23/49 (46%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           K+G++     N + EM  ++  T+ +   ++ +   +  +  A+  + +
Sbjct: 117 KQGYVSYPEINPVTEMVDLMSATRSYGLNSSAVQATKNMINSALEILKA 165


>gi|217976223|ref|YP_002360370.1| flagellar basal body rod protein FlgC [Methylocella silvestris BL2]
 gi|217501599|gb|ACK49008.1| flagellar basal-body rod protein FlgC [Methylocella silvestris BL2]
          Length = 140

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/99 (14%), Positives = 30/99 (30%)

Query: 145 KGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNA 204
            G      K I              VR +  G          +  +     +GF++  N 
Sbjct: 40  PGADPYARKTITFASELDRASGVDLVRVKGIGADKAPFRVEQDPGNPAADSKGFVKLPNV 99

Query: 205 NSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           N + EM  M    + + +   ++ +  +     +  + S
Sbjct: 100 NVIMEMADMREANRSYEANLQIVKQTRELSSMTVDLLRS 138



 Score = 39.5 bits (90), Expect = 0.46,   Method: Composition-based stats.
 Identities = 15/104 (14%), Positives = 34/104 (32%), Gaps = 8/104 (7%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKF-SEVVGAIKNDIDQK 55
           S  +  +   A   RL  V++N++N  + G       +    + F SE+  A   D+ + 
Sbjct: 8   SLRVAGSGLEAQSARLRIVSENLANAQSTGSTPGADPYARKTITFASELDRASGVDLVRV 67

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
               A    +  ++     +  ++    L         +     
Sbjct: 68  KGIGADKAPFRVEQDPGNPAADSKGFVKLPNVNVIMEMADMREA 111


>gi|120597303|ref|YP_961877.1| flagellar basal-body rod protein FlgC [Shewanella sp. W3-18-1]
 gi|146294552|ref|YP_001184976.1| flagellar basal-body rod protein FlgC [Shewanella putrefaciens
           CN-32]
 gi|120557396|gb|ABM23323.1| flagellar basal-body rod protein FlgC [Shewanella sp. W3-18-1]
 gi|145566242|gb|ABP77177.1| flagellar basal-body rod protein FlgC [Shewanella putrefaciens
           CN-32]
          Length = 138

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 22/44 (50%)

Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +G++  SN N++ EM  M+  ++ F +   +++         ++
Sbjct: 91  QGYVAYSNVNTIEEMADMMAASRSFETSVEVMNRARSMQQGLLQ 134


>gi|323703356|ref|ZP_08115006.1| flagellar hook-associated protein FlgK [Desulfotomaculum
          nigrificans DSM 574]
 gi|323531719|gb|EGB21608.1| flagellar hook-associated protein FlgK [Desulfotomaculum
          nigrificans DSM 574]
          Length = 496

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 6/37 (16%), Positives = 13/37 (35%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
             I     +A  + +     N++N  T G+   +  
Sbjct: 7  GLEIAKRGTMAHRKAMDVTGHNIANASTPGYSRQEAV 43



 Score = 43.3 bits (100), Expect = 0.026,   Method: Composition-based stats.
 Identities = 6/41 (14%), Positives = 16/41 (39%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  +   E+ ++I     + +   +I   ++ +   I  I 
Sbjct: 456 SGVSVDEELTRVIQFQYGYQASARMIAIQDEMLDYLINRIR 496


>gi|253688966|ref|YP_003018156.1| flagellar hook-associated protein FlgK [Pectobacterium
          carotovorum subsp. carotovorum PC1]
 gi|251755544|gb|ACT13620.1| flagellar hook-associated protein FlgK [Pectobacterium
          carotovorum subsp. carotovorum PC1]
          Length = 568

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/74 (17%), Positives = 27/74 (36%), Gaps = 2/74 (2%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA--IKNDIDQKISF 58
          M    N  ++     +  LSTV++N+SN    G+        +   +      I   ++ 
Sbjct: 1  MSNLINTAMSGLKGAQVALSTVSNNISNQAVTGYSRQNAILEQATSSSTSAGYIGNGVNV 60

Query: 59 VASGKEYLSKEVGS 72
          V+  ++Y       
Sbjct: 61 VSINRQYNEFITNQ 74


>gi|227355995|ref|ZP_03840387.1| flagellar hook-associated protein 1 [Proteus mirabilis ATCC
          29906]
 gi|227163983|gb|EEI48885.1| flagellar hook-associated protein 1 [Proteus mirabilis ATCC
          29906]
          Length = 547

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 19/42 (45%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
              N  ++   A +  +ST+++N++N     +      F+E
Sbjct: 3  NNLINTAMSGLNAAQAAMSTISNNIANQKVNWYNRQMTVFNE 44


>gi|21242730|ref|NP_642312.1| flagellar basal body rod protein FlgB [Xanthomonas axonopodis pv.
          citri str. 306]
 gi|78047589|ref|YP_363764.1| flagellar basal body rod protein FlgB [Xanthomonas campestris pv.
          vesicatoria str. 85-10]
 gi|294625271|ref|ZP_06703910.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str.
          ICPB 11122]
 gi|294664588|ref|ZP_06729929.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str.
          ICPB 10535]
 gi|21108206|gb|AAM36848.1| flagellar protein [Xanthomonas axonopodis pv. citri str. 306]
 gi|78036019|emb|CAJ23710.1| flagellar basal body protein [Xanthomonas campestris pv.
          vesicatoria str. 85-10]
 gi|292600445|gb|EFF44543.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str.
          ICPB 11122]
 gi|292605645|gb|EFF48955.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str.
          ICPB 10535]
          Length = 133

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 26/55 (47%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65
          A    EQR+  +A N+SN DT G++   + F   + + + + D  +      K Y
Sbjct: 15 ALTLREQRMKLIASNLSNVDTPGYKAKDLNFEAALKSAQGEQDGGLLQTTDAKHY 69


>gi|306817677|ref|ZP_07451419.1| possible flagellar hook-associated protein FlgK [Mobiluncus
          mulieris ATCC 35239]
 gi|304649491|gb|EFM46774.1| possible flagellar hook-associated protein FlgK [Mobiluncus
          mulieris ATCC 35239]
          Length = 916

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 20/42 (47%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44
          +S N GL    A ++ +     N+ N +T G+   +V+   +
Sbjct: 6  SSLNAGLTGLYAAQRLIEVSGQNIINQNTPGYTRQRVEQKAL 47



 Score = 40.2 bits (92), Expect = 0.23,   Method: Composition-based stats.
 Identities = 4/39 (10%), Positives = 11/39 (28%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            S+ +   E+  +I     +     +       +   I 
Sbjct: 875 QSSVDMNEEVMNLIRGQHAYAGAARITSTVNSMLETLIN 913


>gi|239907786|ref|YP_002954527.1| flagellar hook-associated protein 1 [Desulfovibrio magneticus RS-1]
 gi|239797652|dbj|BAH76641.1| flagellar hook-associated protein 1 [Desulfovibrio magneticus RS-1]
          Length = 710

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/211 (13%), Positives = 48/211 (22%), Gaps = 7/211 (3%)

Query: 31  TVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF 90
           T G         ++V AI N               +S    S            +  +  
Sbjct: 500 TPG----VTTLDDLVTAIDNAFSPPAFSDTYLDASISNNRLSISGVNGRTFQFGDDSSGV 555

Query: 91  ALESPRGIILT--RDGRF-KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGE 147
                    LT  R          G+ ++      V     V +      +     E   
Sbjct: 556 LAALGVNTFLTGSRASDVAVNDVVGTDLNRINAGHVGADGLVAVGDNLTAKAMTELENTA 615

Query: 148 ISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSM 207
           IS       T+     D     V +  S  +        +      +    L  S  N  
Sbjct: 616 ISFYVAGKTTVNQTLTDNYASLVSKIGSDTAAASYQATYQAALAAELNEQQLSTSGVNLD 675

Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            E+  MI     + +   L+          +
Sbjct: 676 EELTNMIKFQHSYQAAAKLVSTANSMFETVL 706



 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 29/81 (35%), Gaps = 2/81 (2%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE--VVGAIKNDIDQKISFVA 60
          +  ++G  A  A +  L    +N+SN DT G+    V   +   V      +   +    
Sbjct: 6  SLLSMGAGALRANQAALQVTGNNISNVDTEGYSRQSVVLKDGQYVNTFTGQVGTGVVAQE 65

Query: 61 SGKEYLSKEVGSFISTGTELD 81
            + +       +++  +  D
Sbjct: 66 VVRAHDKFVEAQYLTKVSARD 86


>gi|256376476|ref|YP_003100136.1| flagellar basal-body rod protein FlgB [Actinosynnema mirum DSM
          43827]
 gi|255920779|gb|ACU36290.1| flagellar basal-body rod protein FlgB [Actinosynnema mirum DSM
          43827]
          Length = 118

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 23/69 (33%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69
          AA   L  R    A+N++N  T GF   KV F E +G      +   +   +        
Sbjct: 12 AALTGLAMRQRVSANNIANVQTPGFIASKVNFEESLGEAVRSGEGSTAVRGTRPVISDSV 71

Query: 70 VGSFISTGT 78
            +      
Sbjct: 72 NAARQDGNN 80


>gi|207728352|ref|YP_002256746.1| flagellar hook-associated protein 1 [Ralstonia solanacearum
          MolK2]
 gi|206591598|emb|CAQ57210.1| flagellar hook-associated protein 1 [Ralstonia solanacearum
          MolK2]
          Length = 642

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 26/83 (31%), Gaps = 2/83 (2%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE--VVGAIKNDIDQKISFVA 60
          +  NI      A +  L    +N++N  T G+   +   +E   +      + Q ++   
Sbjct: 4  SLLNIAATGLRAADVNLQVTGNNIANASTAGYSRQEAVQTENIPMATGAGYLGQGVNVTT 63

Query: 61 SGKEYLSKEVGSFISTGTELDFA 83
            + Y         S       A
Sbjct: 64 VKRIYDQFLTAQVQSGQAATSAA 86


>gi|154687656|ref|YP_001422817.1| flagellar hook-associated protein FlgK [Bacillus amyloliquefaciens
           FZB42]
 gi|154353507|gb|ABS75586.1| FlgK [Bacillus amyloliquefaciens FZB42]
          Length = 505

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 17/42 (40%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           S  +   EM  MI     +N+   +I   ++   + I  + +
Sbjct: 461 SAVSLDEEMTNMIQFQHAYNAAARIITMQDEIFDKIINGMGT 502



 Score = 46.0 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 19/40 (47%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
                 A  A +  LSTV++N++N +T G+   +V    
Sbjct: 7  GLETARRALSAQQTALSTVSNNVANANTEGYTRQRVTLQS 46


>gi|254463002|ref|ZP_05076418.1| flagellar basal-body rod protein FlgC [Rhodobacterales bacterium
           HTCC2083]
 gi|206679591|gb|EDZ44078.1| flagellar basal-body rod protein FlgC [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 139

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 6/43 (13%), Positives = 19/43 (44%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++  +  +   EM  MI  ++++ +   ++      M+  + 
Sbjct: 93  GYVYIAPVDVNEEMVDMIEASRQYQNNLEVVTTMRTLMMRTVN 135


>gi|126668555|ref|ZP_01739509.1| flagellar basal-body rod protein B [Marinobacter sp. ELB17]
 gi|126626960|gb|EAZ97603.1| flagellar basal-body rod protein B [Marinobacter sp. ELB17]
          Length = 136

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 24/54 (44%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
          A  A  QR   +A+N++N DT GF+   + F  ++   +++         +   
Sbjct: 15 ALQARVQRAEILANNLANADTPGFKARDIDFQAIMKRAQSNASGFGMNTTNSGH 68


>gi|2916794|emb|CAA11960.1| flagellar basal-body rod protein [Sinorhizobium meliloti]
          Length = 139

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/99 (14%), Positives = 33/99 (33%)

Query: 145 KGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNA 204
            G    + K I+             V  E  G   +      +  +    ++G ++  N 
Sbjct: 39  PGADPFRRKTISFAAEVDRASGASLVEVERLGTDDSEFNIEFDPGNPAADEKGMVKLPNL 98

Query: 205 NSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           N + EM  M    + + +    I ++   + + I  + +
Sbjct: 99  NILIEMADMREANRAYEANLQTIKQSRDLISQTIDLLRA 137



 Score = 42.9 bits (99), Expect = 0.035,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 21/54 (38%), Gaps = 7/54 (12%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKN 50
          +  +  +   A   RL  V++N++N  + G       FR   + F+  V     
Sbjct: 7  ALKVSASGLQAESTRLRIVSENIANARSTGDAPGADPFRRKTISFAAEVDRASG 60


>gi|332187897|ref|ZP_08389630.1| flagellar hook-associated protein FlgK [Sphingomonas sp. S17]
 gi|332012058|gb|EGI54130.1| flagellar hook-associated protein FlgK [Sphingomonas sp. S17]
          Length = 447

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 26/60 (43%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M    +IG +   A +  L+ V +N++N  T G+    V   EVV A     ++  +   
Sbjct: 1  MSDLLSIGASGVRAYQTALTAVGENIANVGTDGYSRRTVTMREVVPAAGLAANKVSAGSG 60


>gi|238752861|ref|ZP_04614326.1| Flagellar hook-associated protein [Yersinia rohdei ATCC 43380]
 gi|238708900|gb|EEQ01153.1| Flagellar hook-associated protein [Yersinia rohdei ATCC 43380]
          Length = 452

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/89 (13%), Positives = 23/89 (25%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
                 L+   A +  L   A N++N  T G+   + + S +  +           V  
Sbjct: 1  MNFIKTALSGTKAAQAHLDATAMNVANMKTPGYSRQRAEQSALGASGVGAYAGNGVNVDG 60

Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWF 90
           K      +               G   +
Sbjct: 61 IKRISDHYLVKQEWQANSQSAYFNGKQRY 89



 Score = 39.5 bits (90), Expect = 0.44,   Method: Composition-based stats.
 Identities = 3/37 (8%), Positives = 15/37 (40%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S+ +   E   ++   + + S   ++   ++   + +
Sbjct: 413 SSVDKDEEAINLMEYQRVYQSNIKVVSTGDQLFRDLL 449


>gi|258513988|ref|YP_003190210.1| flagellar hook-associated protein FlgK [Desulfotomaculum
          acetoxidans DSM 771]
 gi|257777693|gb|ACV61587.1| flagellar hook-associated protein FlgK [Desulfotomaculum
          acetoxidans DSM 771]
          Length = 430

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 9/37 (24%), Positives = 17/37 (45%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
             IG  A  A +  +    +N++N +T G+   +V 
Sbjct: 7  GLEIGKRALQANKTGMDVTGNNVANANTTGYSRQRVN 43



 Score = 42.9 bits (99), Expect = 0.038,   Method: Composition-based stats.
 Identities = 4/37 (10%), Positives = 15/37 (40%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  +   EM  ++     + + + +I   ++ +   +
Sbjct: 390 SGVSIEEEMTNLLQYQYGYQAASKIITTIDQMLETLL 426


>gi|261419416|ref|YP_003253098.1| flagellar basal body rod protein FlgB [Geobacillus sp. Y412MC61]
 gi|319766231|ref|YP_004131732.1| flagellar basal-body rod protein FlgB [Geobacillus sp. Y412MC52]
 gi|261375873|gb|ACX78616.1| flagellar basal-body rod protein FlgB [Geobacillus sp. Y412MC61]
 gi|317111097|gb|ADU93589.1| flagellar basal-body rod protein FlgB [Geobacillus sp. Y412MC52]
          Length = 129

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 16/33 (48%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
                 R   +ADN++N DT G++   V+F  
Sbjct: 14 GLRYAALRQQAIADNIANADTPGYKAKDVRFQS 46


>gi|297584033|ref|YP_003699813.1| flagellar basal-body rod protein FlgC [Bacillus selenitireducens
          MLS10]
 gi|297142490|gb|ADH99247.1| flagellar basal-body rod protein FlgC [Bacillus selenitireducens
          MLS10]
          Length = 142

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 19/52 (36%), Gaps = 10/52 (19%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG---------FRTIKVKFS 42
          M    N+  +   +   R+  V+ NM+N   T G         +R   V F 
Sbjct: 1  MFHGMNVSASGLTSQRLRMDVVSSNMANAESTRGRFVDGEWEPYRRKMVTFE 52



 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 8/35 (22%), Positives = 19/35 (54%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
           G++E  N + + EM  ++  T+ + +  T  D ++
Sbjct: 106 GYVELPNVDPLKEMIDLMSATRSYEAGVTSFDAHK 140


>gi|1086559|gb|AAB68966.1| FlgC [Agrobacterium tumefaciens]
 gi|2459712|gb|AAB71788.1| FlgC [Agrobacterium tumefaciens]
          Length = 139

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 9/68 (13%), Positives = 24/68 (35%)

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
           G+         +  +      G ++  N N + EM  M    + +++   +I +    + 
Sbjct: 70  GVDRGDFVHEYDPGNPAADTNGMVKMPNVNVVIEMADMREANRSYDANLQVIRQTRDLVA 129

Query: 236 EAIRNIAS 243
             I  + +
Sbjct: 130 STIDLLKA 137



 Score = 38.3 bits (87), Expect = 1.0,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 19/48 (39%), Gaps = 7/48 (14%)

Query: 10 AAQLALEQRLSTVADNMSNT----DTVG---FRTIKVKFSEVVGAIKN 50
          +       RL  V++N++N     DT G   +R   V F   +  +  
Sbjct: 13 SGLEVQSTRLRIVSENIANARSTGDTPGADPYRRKTVTFGSELDHVSG 60


>gi|251772446|gb|EES53013.1| flagellar basal-body rod protein FlgC [Leptospirillum
           ferrodiazotrophum]
          Length = 145

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 20/40 (50%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           G++   N + + EM  +I  ++ + +  T +D  ++   +
Sbjct: 100 GYVMHPNVSKLEEMTNLIDASRAYEANLTAMDTTKRMASK 139



 Score = 36.4 bits (82), Expect = 3.7,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 6/47 (12%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTD-TVG-----FRTIKVKFSEV 44
          +  I  +   A   RL+ +A N++N D T G     +    V F+ V
Sbjct: 6  AMRISASGLEAERVRLNVLAGNLANADATRGNPNGTYERRDVIFAAV 52


>gi|209963558|ref|YP_002296473.1| flagellar hook-associated protein 1 FlgK, putative
          [Rhodospirillum centenum SW]
 gi|209957024|gb|ACI97660.1| flagellar hook-associated protein 1 FlgK, putative
          [Rhodospirillum centenum SW]
          Length = 495

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 20/41 (48%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44
          +    L    A +Q+ + ++ N++N  T G+   +V  + +
Sbjct: 6  ALQTALTGLQAQQQKSAILSRNVANATTPGYTRKEVTLASL 46


>gi|74317654|ref|YP_315394.1| flagellar basal-body rod protein FlgC [Thiobacillus denitrificans
           ATCC 25259]
 gi|74057149|gb|AAZ97589.1| flagellar basal-body rod protein FlgC [Thiobacillus denitrificans
           ATCC 25259]
          Length = 134

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 8/31 (25%), Positives = 16/31 (51%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
           G++   N N + EM  MI  ++ + S   ++
Sbjct: 89  GYVTMPNVNVVEEMVNMISASRSYQSNVEMM 119



 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 6/107 (5%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDT----VG--FRTIKVKFSEVVGAIKNDIDQKI 56
             FN+  +A  A  QRL+TVA N++N D+     G  ++  +V F+             +
Sbjct: 5   NIFNVAGSAMNAQSQRLNTVASNLANADSATSANGQPYKAKQVVFAAAPVGDNGATGVNV 64

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103
           + V      +            +  +    +     E    I  +R 
Sbjct: 65  AAVIDDPSPMKTVYDPKNPLADDKGYVTMPNVNVVEEMVNMISASRS 111


>gi|254239444|ref|ZP_04932766.1| flagellar hook-associated protein 1 FlgK [Pseudomonas aeruginosa
          2192]
 gi|126192822|gb|EAZ56885.1| flagellar hook-associated protein 1 FlgK [Pseudomonas aeruginosa
          2192]
          Length = 682

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/52 (19%), Positives = 17/52 (32%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M    +IGL+     +  L+    N++N  T G+          V       
Sbjct: 1  MSDLLSIGLSGLGTSQTWLTITGHNITNVKTPGYSRQDAIQQTQVPQFSGAG 52


>gi|83747648|ref|ZP_00944684.1| FlgK [Ralstonia solanacearum UW551]
 gi|207739731|ref|YP_002258124.1| flagellar hook-associated protein 1 [Ralstonia solanacearum
          IPO1609]
 gi|83725700|gb|EAP72842.1| FlgK [Ralstonia solanacearum UW551]
 gi|206593113|emb|CAQ60019.1| flagellar hook-associated protein 1 [Ralstonia solanacearum
          IPO1609]
          Length = 642

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 26/83 (31%), Gaps = 2/83 (2%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE--VVGAIKNDIDQKISFVA 60
          +  NI      A +  L    +N++N  T G+   +   +E   +      + Q ++   
Sbjct: 4  SLLNIAATGLRAADVNLQVTGNNIANASTAGYSRQEAVQTENIPMATGAGYLGQGVNVTT 63

Query: 61 SGKEYLSKEVGSFISTGTELDFA 83
            + Y         S       A
Sbjct: 64 VKRIYDQFLTAQVQSGQAATSAA 86


>gi|260888523|ref|ZP_05899786.1| flagellar hook-associated protein FlgK [Selenomonas sputigena ATCC
           35185]
 gi|330838173|ref|YP_004412753.1| flagellar hook-associated protein FlgK [Selenomonas sputigena ATCC
           35185]
 gi|260861720|gb|EEX76220.1| flagellar hook-associated protein FlgK [Selenomonas sputigena ATCC
           35185]
 gi|329745937|gb|AEB99293.1| flagellar hook-associated protein FlgK [Selenomonas sputigena ATCC
           35185]
          Length = 571

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 16/41 (39%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E+  MI   Q +++    +   ++ +   + N  
Sbjct: 527 SGVNWNEELSNMIKFQQGYSACARCMTTMDEMLDRLVNNTG 567



 Score = 38.3 bits (87), Expect = 0.84,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 15/40 (37%), Gaps = 7/40 (17%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
          M              +  L TV  N++N +T G+   +V 
Sbjct: 1  MVRGIY-------NNQLSLDTVGHNITNANTEGYSRQRVN 33


>gi|187935497|ref|YP_001885039.1| flagellar basal body rod protein FlgC [Clostridium botulinum B str.
           Eklund 17B]
 gi|187723650|gb|ACD24871.1| flagellar basal-body rod protein FlgC [Clostridium botulinum B str.
           Eklund 17B]
          Length = 135

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 20/42 (47%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N N + EM  M+  T+ + +    ++  +    +A+
Sbjct: 90  GYVTMPNVNVLNEMADMMVSTRSYEANVETLNALKGMFSKAL 131



 Score = 37.5 bits (85), Expect = 1.5,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 32/107 (29%), Gaps = 7/107 (6%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTV----G---FRTIKVKFSEVVGAIKNDIDQKI 56
           S  I      A   R+ T+  NM+N+ T     G   +      F E +   +     K 
Sbjct: 6   SMQISATGISAERLRMDTITSNMTNSSTTRSADGSGPYVRKIAVFQEALDENRKMAGIKP 65

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103
             +   K  L K          E  +    +     E    ++ TR 
Sbjct: 66  VKIVEDKSPLRKVYKPTHPDADETGYVTMPNVNVLNEMADMMVSTRS 112


>gi|119469947|ref|ZP_01612752.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
          [Alteromonadales bacterium TW-7]
 gi|119446657|gb|EAW27930.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
          [Alteromonadales bacterium TW-7]
          Length = 135

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 27/54 (50%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65
           L   QR   +A N++N DT G++   + F+  + A K+      + V + +++
Sbjct: 16 MLIRSQRAEVLASNIANADTPGYKAKDINFASALKAAKSHQQSGNTMVTTNEKH 69


>gi|313106041|ref|ZP_07792300.1| flagellar hook-associated protein FlgK [Pseudomonas aeruginosa
          39016]
 gi|310878802|gb|EFQ37396.1| flagellar hook-associated protein FlgK [Pseudomonas aeruginosa
          39016]
          Length = 682

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/52 (19%), Positives = 17/52 (32%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M    +IGL+     +  L+    N++N  T G+          V       
Sbjct: 1  MSDLLSIGLSGLGTSQTWLTITGHNITNVKTPGYSRQDAIQQTQVPQFSGAG 52


>gi|295697521|ref|YP_003590759.1| flagellar hook-associated protein FlgK [Bacillus tusciae DSM 2912]
 gi|295413123|gb|ADG07615.1| flagellar hook-associated protein FlgK [Bacillus tusciae DSM 2912]
          Length = 540

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 6/36 (16%), Positives = 15/36 (41%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +   EM  MI   Q + +   ++   ++ + + I 
Sbjct: 498 VSIDEEMANMIRFQQAYGASARMVTAIDQMLDKLIN 533



 Score = 45.6 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 16/40 (40%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
               +      +  ++T + N+ N +T G+   +V  S 
Sbjct: 7  GLETAVRGLRGQQAAINTASHNIDNANTPGYTRQRVDLSA 46


>gi|242309757|ref|ZP_04808912.1| flagellar basal body rod protein FlgC [Helicobacter pullorum MIT
           98-5489]
 gi|239523758|gb|EEQ63624.1| flagellar basal body rod protein FlgC [Helicobacter pullorum MIT
           98-5489]
          Length = 166

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 17/43 (39%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N + EM  +I  T+ + +        +     AI 
Sbjct: 120 GYVAYPNINPVVEMADLIEATKAYQANVAAFQSAKNMATTAIS 162



 Score = 39.5 bits (90), Expect = 0.45,   Method: Composition-based stats.
 Identities = 9/31 (29%), Positives = 18/31 (58%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32
           +SF+I      A  QR++ ++ N++N +T 
Sbjct: 3  LSSFDISGYGLSAQRQRVNLISSNIANANTT 33


>gi|332524834|ref|ZP_08401025.1| flagellar basal body rod protein [Rubrivivax benzoatilyticus JA2]
 gi|332108134|gb|EGJ09358.1| flagellar basal body rod protein [Rubrivivax benzoatilyticus JA2]
          Length = 164

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 16/33 (48%)

Query: 8   GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
            L+   A + RL     N++N+ T GFR    +
Sbjct: 73  SLSGLNAAQTRLDVAGHNVANSLTEGFRRQVAQ 105


>gi|326386936|ref|ZP_08208550.1| Flagellar hook-associated protein [Novosphingobium
          nitrogenifigens DSM 19370]
 gi|326208616|gb|EGD59419.1| Flagellar hook-associated protein [Novosphingobium
          nitrogenifigens DSM 19370]
          Length = 454

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/74 (16%), Positives = 23/74 (31%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
             +IG +   A +  L     N++N  T G+        E+V          IS     
Sbjct: 4  NLLSIGASGARAAQIALDVTGQNIANASTDGYVRRAANNVELVSPSGWSAPNDISLAGVT 63

Query: 63 KEYLSKEVGSFIST 76
             +++    +   
Sbjct: 64 VSGITRNADIYTQA 77



 Score = 36.4 bits (82), Expect = 4.0,   Method: Composition-based stats.
 Identities = 3/36 (8%), Positives = 10/36 (27%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +   E   ++   Q F +   ++          + 
Sbjct: 417 VDLNTEAVNLVRFQQAFQASGKVMQTASDIFTTMLN 452


>gi|94264091|ref|ZP_01287890.1| Flagellar basal-body rod protein FlgC [delta proteobacterium
           MLMS-1]
 gi|93455507|gb|EAT05697.1| Flagellar basal-body rod protein FlgC [delta proteobacterium
           MLMS-1]
          Length = 144

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 20/42 (47%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G +   N N+  +M  M++  + + +    +D  ++  L A+
Sbjct: 99  GIVRYPNVNTAEQMVDMMNARRSYEANVAALDAVKEMALRAL 140



 Score = 39.1 bits (89), Expect = 0.48,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 8/51 (15%)

Query: 1  MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43
          M   T+ NI  +A  A   RL+  + NM+N +T     G  +R   V F  
Sbjct: 1  MDILTAMNISGSALKAERSRLNIASMNMANANTTRTVEGGPYRAKSVVFEA 51


>gi|269836576|ref|YP_003318804.1| flagellar basal-body rod protein FlgB [Sphaerobacter thermophilus
          DSM 20745]
 gi|269785839|gb|ACZ37982.1| flagellar basal-body rod protein FlgB [Sphaerobacter thermophilus
          DSM 20745]
          Length = 138

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 20/43 (46%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
          A   L  R    A+N++N DT  F+  +V F E +    +D  
Sbjct: 15 ALDGLALRQRVTANNVANADTPRFKASRVTFEETLRQRLHDEP 57


>gi|23099962|ref|NP_693428.1| flagellar hook-associated protein FlgK [Oceanobacillus iheyensis
           HTE831]
 gi|22778193|dbj|BAC14463.1| flagellar hook-associated protein 1 [Oceanobacillus iheyensis
           HTE831]
          Length = 490

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 15/41 (36%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  +   EM  MI     +N+    +   ++ +   I  + 
Sbjct: 446 SAVSLDEEMSNMIKFQHAYNAAARGMTTMDEMIDTIINRMG 486



 Score = 41.4 bits (95), Expect = 0.12,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 16/34 (47%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44
          A  A +  L T   N+SN +T G+   +V    +
Sbjct: 13 ALAAQQSALYTTGHNISNANTPGYTRQRVNLEAM 46


>gi|290474980|ref|YP_003467864.1| flagellar hook-filament junction protein 1 [Xenorhabdus bovienii
          SS-2004]
 gi|289174297|emb|CBJ81087.1| flagellar biosynthesis; hook-filament junction protein 1
          [Xenorhabdus bovienii SS-2004]
          Length = 546

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 18/41 (43%), Gaps = 1/41 (2%)

Query: 1  MQTSF-NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
          M  S  N  ++   A +  +  V +N++N+  VG+      
Sbjct: 1  MSNSLMNTAMSGINAAQVAMGVVGNNIANSKNVGYNRQTTV 41


>gi|121607555|ref|YP_995362.1| flagellar hook-associated protein FlgK [Verminephrobacter
          eiseniae EF01-2]
 gi|121552195|gb|ABM56344.1| flagellar hook-associated protein FlgK [Verminephrobacter
          eiseniae EF01-2]
          Length = 658

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 20/48 (41%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
           N+   A LA +  L T   N++N +T G+    V    V G    + 
Sbjct: 4  LNVSTRALLADQVVLQTTGHNIANVNTPGYSRQSVALQTVPGQFTGNG 51



 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 18/137 (13%), Positives = 39/137 (28%), Gaps = 7/137 (5%)

Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170
           DG  +   G     D   +   +  +       + G  S    +          +S G+ 
Sbjct: 523 DGWEIRLQGAPNTGDTVLIGNALDPQYGDRFSRDTGNASALMDLRDLKMFDESTLSDGYA 582

Query: 171 RRENSGISPNIPPTPLEDLSGVTVKRGFLED-----SNANSMYEMGQMIHLTQKFNSITT 225
           +      +              T+    LE      S  N   E  ++I   Q F + + 
Sbjct: 583 QAIAQVGTRTQSAK-FAADLSRTIAAN-LERDRTAISGVNLDEEAARLIQYQQAFQASSK 640

Query: 226 LIDENEKSMLEAIRNIA 242
           ++   +      ++ +A
Sbjct: 641 VMQVAQNIFDALLQGLA 657


>gi|91776306|ref|YP_546062.1| flagellar basal-body rod protein FlgB [Methylobacillus
          flagellatus KT]
 gi|91710293|gb|ABE50221.1| flagellar basal-body rod protein FlgB [Methylobacillus
          flagellatus KT]
          Length = 131

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 22/66 (33%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69
           A     QR   +A N++N DT G++   + F++            +    +   ++   
Sbjct: 13 TALRVRGQRQELLAANIANADTPGYKARDINFADTFKQALTGASGGLKADTTHPGHIPAT 72

Query: 70 VGSFIS 75
                
Sbjct: 73 ASHQNG 78


>gi|51598554|ref|YP_072742.1| flagellar basal body rod protein FlgB [Borrelia garinii PBi]
 gi|51573125|gb|AAU07150.1| flagellar basal-body rod protein [Borrelia garinii PBi]
          Length = 135

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 9/32 (28%), Positives = 16/32 (50%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
             L  R   ++DN++N DT  F+  ++ F  
Sbjct: 15 LDVLSLRQGVISDNIANVDTPNFKRSRISFES 46


>gi|51598442|ref|YP_072630.1| flagellar hook-associated protein FlgK [Borrelia garinii PBi]
 gi|51573013|gb|AAU07038.1| flagellar hook-associated protein [Borrelia garinii PBi]
          Length = 627

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 16/41 (39%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E+  MI   Q F + +  I  + + +   I  + 
Sbjct: 586 SGVNKDEELANMIEFQQAFIAASKFITVSAELIDTIINKMG 626



 Score = 35.6 bits (80), Expect = 6.0,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 19/46 (41%), Gaps = 3/46 (6%)

Query: 1  MQT---SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
          M +      IG  +  A +  ++TV  N+SN    G+   +V    
Sbjct: 1  MDSTFSGIEIGKRSLFAHKDAMNTVGHNLSNATKPGYSRQRVTMKT 46


>gi|197122916|ref|YP_002134867.1| flagellar hook-associated protein FlgK [Anaeromyxobacter sp. K]
 gi|196172765|gb|ACG73738.1| flagellar hook-associated protein FlgK [Anaeromyxobacter sp. K]
          Length = 469

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 5/38 (13%), Positives = 16/38 (42%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            S  +   E+ +M    + + +I+ +I  + +     +
Sbjct: 429 ASGVSVDEELLEMEKAQRAYEAISKVIQASSEMFDTLL 466



 Score = 36.0 bits (81), Expect = 5.0,   Method: Composition-based stats.
 Identities = 5/43 (11%), Positives = 13/43 (30%)

Query: 24 DNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66
           N+ N +T G+   +   +  + A +             +   
Sbjct: 27 HNLQNANTPGYARQRAVLATALPAQQAGGAWIGRGATLAQVTQ 69


>gi|156976147|ref|YP_001447053.1| flagellar hook-associated protein [Vibrio harveyi ATCC BAA-1116]
 gi|156527741|gb|ABU72826.1| hypothetical protein VIBHAR_04918 [Vibrio harveyi ATCC BAA-1116]
          Length = 457

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 17/43 (39%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44
              NI L+   A    L   A N++N  T G+   +   + V
Sbjct: 1  MNLVNIALSGLNANRVALDVTAQNVANIITPGYSRQQALMTSV 43


>gi|107100531|ref|ZP_01364449.1| hypothetical protein PaerPA_01001556 [Pseudomonas aeruginosa
          PACS2]
 gi|13183733|gb|AAK15324.1|AF332547_1 flagellar hook-associated protein 1 FlgK [Pseudomonas aeruginosa]
          Length = 682

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/52 (19%), Positives = 17/52 (32%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M    +IGL+     +  L+    N++N  T G+          V       
Sbjct: 1  MSDLLSIGLSGLGTSQTWLTITGHNITNVKTPGYSRQDAIQQTQVPQFSGAG 52


>gi|330830306|ref|YP_004393258.1| flagellar basal-body rod protein FlgB [Aeromonas veronii B565]
 gi|328805442|gb|AEB50641.1| Flagellar basal-body rod protein FlgB [Aeromonas veronii B565]
          Length = 132

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/93 (12%), Positives = 35/93 (37%)

Query: 17  QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76
           +R   ++ N++N DT GF+   + F++ +   ++     ++  +     L+ +    +  
Sbjct: 21  KRAEVLSSNIANADTPGFKARDINFAQALQEAQSHQGFGLATTSEKHFALNMDAPGTVQY 80

Query: 77  GTELDFALEGDAWFALESPRGIILTRDGRFKVT 109
              L           ++  R   L     ++ +
Sbjct: 81  RNPLQPDTGDGNTVDVQQERSEFLRNSLEYQTS 113


>gi|300696919|ref|YP_003747580.1| flagellar hook-filament junction protein 1 [Ralstonia
          solanacearum CFBP2957]
 gi|299073643|emb|CBJ53163.1| flagellar hook-filament junction protein 1 [Ralstonia
          solanacearum CFBP2957]
          Length = 642

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 26/83 (31%), Gaps = 2/83 (2%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE--VVGAIKNDIDQKISFVA 60
          +  NI      A +  L    +N++N  T G+   +   +E   +      + Q ++   
Sbjct: 4  SLLNIAATGLRAADVNLQVTGNNIANASTAGYSRQEAVQTENIPMATGAGYLGQGVNVTT 63

Query: 61 SGKEYLSKEVGSFISTGTELDFA 83
            + Y         S       A
Sbjct: 64 VKRIYDQFLTAQVQSGQAATSAA 86


>gi|254780380|ref|YP_003064793.1| flagellar basal body rod protein FlgC [Candidatus Liberibacter
          asiaticus str. psy62]
 gi|254040057|gb|ACT56853.1| flagellar basal body rod protein FlgC [Candidatus Liberibacter
          asiaticus str. psy62]
          Length = 134

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 22/60 (36%), Gaps = 10/60 (16%)

Query: 1  MQTSF---NIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKN 50
          M       +I  +       R+  +++N++N  T G       +R   + F EV+     
Sbjct: 1  MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60



 Score = 37.5 bits (85), Expect = 1.6,   Method: Composition-based stats.
 Identities = 18/119 (15%), Positives = 37/119 (31%)

Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183
           L + S  +QI  ++                   T+    V    G VR +  G+  +   
Sbjct: 15  LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74

Query: 184 TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
              +    V    G ++  N N + E   M    + + +    I ++   M   +  + 
Sbjct: 75  EEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133


>gi|167034947|ref|YP_001670178.1| flagellar basal body rod protein FlgB [Pseudomonas putida GB-1]
 gi|166861435|gb|ABY99842.1| flagellar basal-body rod protein FlgB [Pseudomonas putida GB-1]
          Length = 136

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 23/64 (35%)

Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76
          QR   +A+N++N DT  ++   + F+ V+ A  +       F          E       
Sbjct: 21 QRAEVLANNIANADTPNYKARDMDFASVLAAESDKQQSGGRFSLDRTNSRHIEADGLAMA 80

Query: 77 GTEL 80
             L
Sbjct: 81 DETL 84


>gi|329901236|ref|ZP_08272761.1| Flagellar hook-associated protein flgK [Oxalobacteraceae
          bacterium IMCC9480]
 gi|327549168|gb|EGF33760.1| Flagellar hook-associated protein flgK [Oxalobacteraceae
          bacterium IMCC9480]
          Length = 644

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 28/83 (33%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M    ++G +  LA +  ++T   N++N  T G+    V  +   G    D         
Sbjct: 1  MGNILSVGQSGLLAAQLGVTTTGHNIANAATPGYSRQVVIQTSAGGQSSGDGFVGQGTTV 60

Query: 61 SGKEYLSKEVGSFISTGTELDFA 83
          +  + +     +      +   A
Sbjct: 61 ASIQRIYDAYTATRVNAAQTSKA 83


>gi|307546971|ref|YP_003899450.1| flagellar basal body rod protein FlgB [Halomonas elongata DSM
          2581]
 gi|307218995|emb|CBV44265.1| flagellar basal body rod protein FlgB [Halomonas elongata DSM
          2581]
          Length = 137

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 21/58 (36%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIS 75
          R   +A N++N DT G++   + FS  +             +A  +       G   +
Sbjct: 22 RQQVLASNIANADTPGYKARDMDFSSALEQAMQRGGGNAEGLALERTSARHLAGQAST 79


>gi|225166310|ref|ZP_03727999.1| flagellar hook-associated protein FlgK [Opitutaceae bacterium TAV2]
 gi|224799447|gb|EEG17987.1| flagellar hook-associated protein FlgK [Opitutaceae bacterium TAV2]
          Length = 469

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 3/42 (7%), Positives = 15/42 (35%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            S  +   E   +++  + + +   +I   +  +   +  + 
Sbjct: 426 TSGVSLDEETINLVNYQRAYQASARVITILDDLLNTVVNRLG 467


>gi|90415320|ref|ZP_01223254.1| flagellar basal-body rod protein FlgC [marine gamma proteobacterium
           HTCC2207]
 gi|90332643|gb|EAS47813.1| flagellar basal-body rod protein FlgC [marine gamma proteobacterium
           HTCC2207]
          Length = 141

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 22/42 (52%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           GF+  SN N + EM +M+   + + +   +++   + M+  +
Sbjct: 95  GFVFSSNVNEVTEMVEMMGAARSYQNNVEVVNTARELMMRTL 136



 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 33/104 (31%), Gaps = 6/104 (5%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKI 56
             F I  +A  A   R+++ A NM+N  TV       F+  +  F  ++   + D   + 
Sbjct: 5   NIFGIAASAMNAQMVRMNSTASNMANAGTVSSSAEDAFKAKRPVFQALLQEHQLDQGSQF 64

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL 100
                  + +     +          A +    F+        +
Sbjct: 65  LGGVKVLDMVDDTAPNKKMHDPGNPLADKDGFVFSSNVNEVTEM 108


>gi|257866375|ref|ZP_05646028.1| flagellar basal-body rod protein FlgB [Enterococcus casseliflavus
          EC30]
 gi|257873109|ref|ZP_05652762.1| flagellar basal-body rod protein FlgB [Enterococcus casseliflavus
          EC10]
 gi|257875988|ref|ZP_05655641.1| flagellar basal-body rod protein FlgB [Enterococcus casseliflavus
          EC20]
 gi|257800333|gb|EEV29361.1| flagellar basal-body rod protein FlgB [Enterococcus casseliflavus
          EC30]
 gi|257807273|gb|EEV36095.1| flagellar basal-body rod protein FlgB [Enterococcus casseliflavus
          EC10]
 gi|257810154|gb|EEV38974.1| flagellar basal-body rod protein FlgB [Enterococcus casseliflavus
          EC20]
          Length = 120

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 27/67 (40%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M  ++++   A     QR   ++ N++N +T G++  ++ F   +           +  A
Sbjct: 1  MLDTYDLLKTAMNVSAQRAELISSNIANVNTDGYKAKRIVFESELKQALASSGTDAATEA 60

Query: 61 SGKEYLS 67
          S  +   
Sbjct: 61 SVSQVKP 67


>gi|288940407|ref|YP_003442647.1| flagellar basal-body rod protein FlgC [Allochromatium vinosum DSM
           180]
 gi|288895779|gb|ADC61615.1| flagellar basal-body rod protein FlgC [Allochromatium vinosum DSM
           180]
          Length = 139

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 5/43 (11%), Positives = 18/43 (41%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++     N + EM  M+  ++ + +   ++      +   ++
Sbjct: 93  GYVFRPAINVVEEMANMMSASRSYEANVEVLTTARSLLQRTLQ 135



 Score = 39.9 bits (91), Expect = 0.34,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 28/111 (25%), Gaps = 13/111 (11%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56
             FN   +A  A   RL+TVA NM+N           +R   V F  V+     +     
Sbjct: 6   RIFNTSASALTAQSVRLNTVASNMANAAMTASTAEDTYRAKHVLFQTVIDQEDPNGVAMP 65

Query: 57  SFVA-------SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL 100
             VA                       G     A+      A         
Sbjct: 66  VRVAGIVDDECEPIPTYEPNHPHANEEGYVFRPAINVVEEMANMMSASRSY 116


>gi|119715016|ref|YP_921981.1| flagellar hook-associated protein FlgK [Nocardioides sp. JS614]
 gi|119535677|gb|ABL80294.1| flagellar hook-associated protein FlgK [Nocardioides sp. JS614]
          Length = 466

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 18/42 (42%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44
          +S N  L A    +  L   + N++N  T G+   +V    +
Sbjct: 6  SSINTALTALRYQQVALDVASTNVANVGTDGYVRRRVVGETL 47


>gi|88704300|ref|ZP_01102014.1| flagellar hook-associated protein 1 FlgK [Congregibacter
          litoralis KT71]
 gi|88701351|gb|EAQ98456.1| flagellar hook-associated protein 1 FlgK [Congregibacter
          litoralis KT71]
          Length = 627

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/71 (15%), Positives = 27/71 (38%)

Query: 13 LALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGS 72
          ++L++ +ST   N++N +T GF   +V+F+ +   +            +       +  +
Sbjct: 1  MSLQRAISTTGQNIANVNTEGFSRQRVEFAALEPQLSGSGFVGSGVGIAAITRSYDQYLA 60

Query: 73 FISTGTELDFA 83
                    A
Sbjct: 61 GDVLDRTSSAA 71


>gi|300693344|ref|YP_003749317.1| flagellar hook-filament junction protein 1 [Ralstonia
          solanacearum PSI07]
 gi|299075381|emb|CBJ34676.1| flagellar hook-filament junction protein 1 [Ralstonia
          solanacearum PSI07]
          Length = 642

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 26/83 (31%), Gaps = 2/83 (2%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE--VVGAIKNDIDQKISFVA 60
          +  NIG       +  L    +N++N  T G+   +   +E   +      + Q ++   
Sbjct: 4  SLLNIGATGLRVADINLQVTGNNIANASTPGYSRQEAVQTENTPMATGAGYLGQGVNVTT 63

Query: 61 SGKEYLSKEVGSFISTGTELDFA 83
            + Y         S       A
Sbjct: 64 VKRIYDQFLTAQVQSGQASTSAA 86


>gi|332088749|gb|EGI93861.1| flagellar basal-body rod protein flgF domain protein [Shigella
          boydii 5216-82]
          Length = 50

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 14/37 (37%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTI 37
          M  +    + A      + +  A N++N    GFR  
Sbjct: 1  MDHAIYTAMGAASQTLNQQAVTASNLANASMPGFRAQ 37


>gi|326791546|ref|YP_004309367.1| flagellar basal-body rod protein FlgB [Clostridium lentocellum
          DSM 5427]
 gi|326542310|gb|ADZ84169.1| flagellar basal-body rod protein FlgB [Clostridium lentocellum
          DSM 5427]
          Length = 122

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/87 (12%), Positives = 31/87 (35%), Gaps = 3/87 (3%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
              N  ++   A   R   +++N+SN DT G++   V+F  ++             +  
Sbjct: 7  IDLMNTAIS---ATMLRKGIISENISNVDTPGYKRKDVRFETILEKEIKKGGTAGLNLKD 63

Query: 62 GKEYLSKEVGSFISTGTELDFALEGDA 88
           +  +  +  +        +  ++ + 
Sbjct: 64 IEPEIYTDYANSSYRLDGNNVDIDVEM 90


>gi|291526374|emb|CBK91961.1| flagellar hook-associated protein FlgK [Eubacterium rectale DSM
          17629]
 gi|291526819|emb|CBK92405.1| flagellar hook-associated protein FlgK [Eubacterium rectale
          M104/1]
          Length = 617

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 19/40 (47%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
            +IG +A  + +   +T A+N++N  T G+   +     
Sbjct: 7  GLHIGSSALSSFQVATNTTANNIANVKTTGYTRQEATLQA 46


>gi|83594184|ref|YP_427936.1| hypothetical protein Rru_A2852 [Rhodospirillum rubrum ATCC 11170]
 gi|83577098|gb|ABC23649.1| conserved hypothetical protein [Rhodospirillum rubrum ATCC 11170]
          Length = 727

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 20/47 (42%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50
          + + G++     ++ L  V+ N++N +T G+         VV     
Sbjct: 6  ALSAGISGLQTAQKGLDLVSHNLANINTPGYTRKIFNPESVVLNGSG 52



 Score = 35.2 bits (79), Expect = 8.1,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 26/80 (32%), Gaps = 1/80 (1%)

Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-TVKRGFLEDSNANSMYEMGQMIH 215
           T G  S          +N+  +  +  T         T++    E S  N   E+ Q++ 
Sbjct: 641 TTGARSFSDYAALTLSQNASEASAVATTVSYQSQLADTLQLKSAEISAVNMDEELSQLLV 700

Query: 216 LTQKFNSITTLIDENEKSML 235
             Q + +   +I      + 
Sbjct: 701 WEQMYRASAKVISAAADMLD 720


>gi|315121849|ref|YP_004062338.1| flagellar basal body rod protein FlgC [Candidatus Liberibacter
          solanacearum CLso-ZC1]
 gi|313495251|gb|ADR51850.1| flagellar basal body rod protein FlgC [Candidatus Liberibacter
          solanacearum CLso-ZC1]
          Length = 134

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/51 (19%), Positives = 20/51 (39%), Gaps = 7/51 (13%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKN 50
          I  +       R+  +++N++N  T G       +R   + F EV+     
Sbjct: 10 IANSGLTVQSSRMHVISENIANARTTGNTAGSDPYRRKTISFEEVMHEGGG 60



 Score = 35.6 bits (80), Expect = 6.1,   Method: Composition-based stats.
 Identities = 6/48 (12%), Positives = 18/48 (37%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
             G ++  N N + E   M    + + +   +I ++   +   +  + 
Sbjct: 86  ASGIVKYPNVNVLVETADMRETNRLYMANLQIIKQSRDMIATTLDLLR 133


>gi|91794997|ref|YP_564648.1| flagellar basal-body rod protein FlgC [Shewanella denitrificans
           OS217]
 gi|91716999|gb|ABE56925.1| flagellar basal-body rod protein FlgC [Shewanella denitrificans
           OS217]
          Length = 139

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 22/44 (50%)

Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +G++  SN N++ EM  M+  ++ F +   +++         ++
Sbjct: 92  QGYVAYSNVNTVDEMADMMAASRSFETSVEIMNRARSMQQGLLQ 135



 Score = 38.3 bits (87), Expect = 0.95,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 26/80 (32%), Gaps = 6/80 (7%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          I  A   A   RL+TVA N++N  T        +R +K  F+ V    + +     S   
Sbjct: 9  IAGAGMNAQTIRLNTVASNIANAGTAAETPEEAYRALKPVFATVYEQFQQNATSGASVEV 68

Query: 61 SGKEYLSKEVGSFISTGTEL 80
                S  +          
Sbjct: 69 MDIVQTSAPLDLRYEPNHPY 88


>gi|13472574|ref|NP_104141.1| flagellar basal body rod protein FlgC [Mesorhizobium loti
           MAFF303099]
 gi|14023320|dbj|BAB49927.1| flagellar basal-body rod protein; FlgC [Mesorhizobium loti
           MAFF303099]
          Length = 138

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 9/60 (15%), Positives = 26/60 (43%)

Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           P++ P   +  +    ++G+++  N N + EM  M    + + +   ++ +    +   I
Sbjct: 73  PSVFPVEFQPGNEAADEKGYVKMPNVNVLIEMADMTEANRSYEANLQVVKQARDLISMTI 132



 Score = 43.3 bits (100), Expect = 0.026,   Method: Composition-based stats.
 Identities = 13/104 (12%), Positives = 32/104 (30%), Gaps = 8/104 (7%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKF-SEVVGAIKNDIDQK 55
           +  +  +   A  +RL  V++N++N  + G       +R   + F SE+  A      + 
Sbjct: 7   ALKVAASGLGAQSERLRVVSENLANAQSTGTTPGADPYRRKTISFVSELDRASGASTVEV 66

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
            S       +  +      +   +    +         +     
Sbjct: 67  NSIDRDPSVFPVEFQPGNEAADEKGYVKMPNVNVLIEMADMTEA 110


>gi|322806995|emb|CBZ04565.1| flagellar basal-body rod protein FlgC [Clostridium botulinum H04402
           065]
          Length = 67

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 21/42 (50%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N N + EM  M+   + + +  T+++  +    +A+
Sbjct: 22  GYVSMPNVNVLNEMADMMASVRTYEANVTVMNAEKSMFGKAL 63


>gi|56419751|ref|YP_147069.1| flagellar basal body rod protein FlgB [Geobacillus kaustophilus
          HTA426]
 gi|297530609|ref|YP_003671884.1| flagellar basal-body rod protein FlgB [Geobacillus sp. C56-T3]
 gi|56379593|dbj|BAD75501.1| flagellar basal-body rod protein [Geobacillus kaustophilus
          HTA426]
 gi|297253861|gb|ADI27307.1| flagellar basal-body rod protein FlgB [Geobacillus sp. C56-T3]
          Length = 129

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 16/33 (48%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
                 R   +ADN++N DT G++   V+F  
Sbjct: 14 GLRYAALRQQAIADNIANADTPGYKAKDVRFQA 46


>gi|307699881|ref|ZP_07636932.1| putative flagellar hook-associated protein FlgK [Mobiluncus
          mulieris FB024-16]
 gi|307614919|gb|EFN94137.1| putative flagellar hook-associated protein FlgK [Mobiluncus
          mulieris FB024-16]
          Length = 976

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 20/42 (47%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44
          +S N GL    A ++ +     N+ N +T G+   +V+   +
Sbjct: 6  SSLNAGLTGLYAAQRLIEVSGQNIINQNTPGYTRQRVEQKAL 47



 Score = 39.9 bits (91), Expect = 0.29,   Method: Composition-based stats.
 Identities = 4/39 (10%), Positives = 11/39 (28%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            S+ +   E+  +I     +     +       +   I 
Sbjct: 935 QSSVDMNEEVMNLIRGQHAYAGAARITSTVNSMLETLIN 973


>gi|289208120|ref|YP_003460186.1| flagellar hook-associated protein FlgK [Thioalkalivibrio sp.
          K90mix]
 gi|288943751|gb|ADC71450.1| flagellar hook-associated protein FlgK [Thioalkalivibrio sp.
          K90mix]
          Length = 640

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 24/48 (50%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54
          IG +A LA ++ + T ++N++N+ T G+   + +   +         Q
Sbjct: 6  IGTSALLAFQRAIGTTSNNIANSATEGYSRQRTELGNLSPQFLGGSYQ 53


>gi|308050026|ref|YP_003913592.1| flagellar basal-body rod protein FlgC [Ferrimonas balearica DSM
           9799]
 gi|307632216|gb|ADN76518.1| flagellar basal-body rod protein FlgC [Ferrimonas balearica DSM
           9799]
          Length = 138

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 20/43 (46%)

Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           +G++  SN N++ EM  M+  T+ F +   ++          +
Sbjct: 91  QGYVTYSNVNTVQEMADMMAATRAFETSVDIMSRARSMQQGLL 133



 Score = 35.2 bits (79), Expect = 9.0,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 35/130 (26%), Gaps = 9/130 (6%)

Query: 7   IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           I  +A      RL+TVA N++N +         +R IK  F  +              +A
Sbjct: 9   IAGSAMNVQSIRLNTVASNLANAEAAAPDEASAYRAIKPVFQTLYEQGNGGGVSANVQIA 68

Query: 61  SGKEYLSKEVGSFISTGTELD---FALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSA 117
              +  +     +       +   +    +     E    +  TR     V       S 
Sbjct: 69  GVVQSDAPLESRYEPDHPMANEQGYVTYSNVNTVQEMADMMAATRAFETSVDIMSRARSM 128

Query: 118 SGKYPVLDMA 127
                 L   
Sbjct: 129 QQGLLKLGGM 138


>gi|251780808|ref|ZP_04823728.1| flagellar basal-body rod protein FlgC [Clostridium botulinum E1
           str. 'BoNT E Beluga']
 gi|243085123|gb|EES51013.1| flagellar basal-body rod protein FlgC [Clostridium botulinum E1
           str. 'BoNT E Beluga']
          Length = 135

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 20/42 (47%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N N + EM  M+  T+ + +    ++  +    +A+
Sbjct: 90  GYVTMPNVNVLNEMADMMVSTRSYEANVETLNALKGMFSKAL 131



 Score = 37.9 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/107 (16%), Positives = 31/107 (28%), Gaps = 7/107 (6%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTV----G---FRTIKVKFSEVVGAIKNDIDQKI 56
           S  I      A   R+ T+  NM+N+ T     G   +      F E +   +     K 
Sbjct: 6   SMQISATGISAERLRMDTITSNMTNSSTTRSADGSGPYVRKIAVFQEALDENRKMAGIKP 65

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103
             +   K    +          E  +    +     E    ++ TR 
Sbjct: 66  VKIVEDKSPFRRVYKPTDPDADETGYVTMPNVNVLNEMADMMVSTRS 112


>gi|289666044|ref|ZP_06487625.1| flagellar basal body rod protein FlgB [Xanthomonas campestris pv.
          vasculorum NCPPB702]
 gi|289670503|ref|ZP_06491578.1| flagellar basal body rod protein FlgB [Xanthomonas campestris pv.
          musacearum NCPPB4381]
          Length = 133

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 26/55 (47%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65
          A    EQR+  +A N+SN DT G++   + F   + + + + D  +      K Y
Sbjct: 15 ALALREQRMKLIASNLSNVDTPGYKAKDLNFEAALKSAQGEQDGGLMQTTDAKHY 69


>gi|317133463|ref|YP_004092777.1| flagellar hook-associated protein FlgK [Ethanoligenens harbinense
          YUAN-3]
 gi|315471442|gb|ADU28046.1| flagellar hook-associated protein FlgK [Ethanoligenens harbinense
          YUAN-3]
          Length = 548

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 24/81 (29%), Gaps = 3/81 (3%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           T  N  L+   A +  L   A N+SN  T G+    V   ++     N    +   V  
Sbjct: 5  NTGLNTALSGLSASQTALGVTAHNISNAATDGYSRQMV---DLQAVNVNTGAYQWKPVVP 61

Query: 62 GKEYLSKEVGSFISTGTELDF 82
                       +    LD 
Sbjct: 62 FVGNGVNSNQITQARDGFLDV 82



 Score = 35.2 bits (79), Expect = 7.2,   Method: Composition-based stats.
 Identities = 5/38 (13%), Positives = 13/38 (34%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           S+ +   E   ++   Q + +   +I      M   + 
Sbjct: 508 SSVSIDEETVNLMKFQQMYGASARVITTINDMMGTLLS 545


>gi|194015655|ref|ZP_03054271.1| flagellar hook-associated protein FlgK [Bacillus pumilus ATCC 7061]
 gi|194013059|gb|EDW22625.1| flagellar hook-associated protein FlgK [Bacillus pumilus ATCC 7061]
          Length = 506

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 7/42 (16%), Positives = 17/42 (40%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            S  +   EM  MI     +N+   ++   ++ + + I  + 
Sbjct: 461 TSAVSIDEEMTNMIQFQHAYNAAARVVTLQDEILDKVINGMG 502



 Score = 42.9 bits (99), Expect = 0.033,   Method: Composition-based stats.
 Identities = 15/107 (14%), Positives = 26/107 (24%), Gaps = 9/107 (8%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE---------VVGAIKNDIDQ 54
                     A    L   ++N+SN +T G+   +V F             G     +  
Sbjct: 7   GLETAKRGITAQRAGLYVTSNNVSNANTDGYSRQRVTFKADNPYPVISVYDGKTYGQMGT 66

Query: 55  KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101
            +      +   S     F      L +        +        LT
Sbjct: 67  GVQVGTVERIRDSFLDLQFRDHNNNLSYYSTKSDALSQMEGVMNDLT 113


>gi|170722885|ref|YP_001750573.1| flagellar hook-associated protein FlgK [Pseudomonas putida W619]
 gi|169760888|gb|ACA74204.1| flagellar hook-associated protein FlgK [Pseudomonas putida W619]
          Length = 682

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 20/38 (52%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIK 38
          M +  NIG++   A +  L T  +N++N D  G+   +
Sbjct: 1  MASLINIGMSGLSASQSGLHTTGNNIANADVAGYSRQQ 38


>gi|260466621|ref|ZP_05812809.1| flagellar basal-body rod protein FlgC [Mesorhizobium opportunistum
           WSM2075]
 gi|259029627|gb|EEW30915.1| flagellar basal-body rod protein FlgC [Mesorhizobium opportunistum
           WSM2075]
          Length = 138

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 7/42 (16%), Positives = 18/42 (42%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G+++  N N + EM  M    + + +   ++ +    +   I
Sbjct: 91  GYVKMPNVNVLIEMADMTEANRSYEANLQVVKQARDLISMTI 132



 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 13/104 (12%), Positives = 34/104 (32%), Gaps = 8/104 (7%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKF-SEVVGAIKNDIDQK 55
           +  +  +   A  +RL  V++N++N  + G       +R   + F SE+  A  +   + 
Sbjct: 7   ALKVAASGLGAQSERLRVVSENLANAQSTGTTPGSDPYRRKTISFVSELDRASGSSTVEV 66

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
            S      ++  +      +   +    +         +     
Sbjct: 67  NSIDRDPSDFPVEFQPGNEAADEKGYVKMPNVNVLIEMADMTEA 110


>gi|206889963|ref|YP_002249841.1| flagellar hook-associated protein FlgK [Thermodesulfovibrio
          yellowstonii DSM 11347]
 gi|206741901|gb|ACI20958.1| flagellar hook-associated protein FlgK [Thermodesulfovibrio
          yellowstonii DSM 11347]
          Length = 554

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 24/65 (36%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
          F+IG    L  ++ L  V+ N+SN  T G+    V F  +   I +        V     
Sbjct: 7  FDIGKTGVLTYQKALEVVSHNISNAATEGYTRQDVIFQNMSSGILSLSGVTGRGVKLEDI 66

Query: 65 YLSKE 69
              +
Sbjct: 67 RRMYD 71



 Score = 38.7 bits (88), Expect = 0.72,   Method: Composition-based stats.
 Identities = 4/36 (11%), Positives = 13/36 (36%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
           S  +   E   +I   + + +   +I   ++ +   
Sbjct: 514 SGVSLDEEAVNLIKYQKMYEASARVIKVADEILATL 549


>gi|258404735|ref|YP_003197477.1| flagellar hook-associated protein FlgK [Desulfohalobium retbaense
          DSM 5692]
 gi|257796962|gb|ACV67899.1| flagellar hook-associated protein FlgK [Desulfohalobium retbaense
          DSM 5692]
          Length = 560

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 25/58 (43%), Gaps = 1/58 (1%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFV 59
           ++ ++G     A ++ L  V +N+SN  T G+    ++ S  +  ++         V
Sbjct: 5  LSALHLGQTGMAASQKALEVVGNNVSNVSTEGYSRQTIE-SSALPTLQRGGLSFGQGV 61



 Score = 43.3 bits (100), Expect = 0.026,   Method: Composition-based stats.
 Identities = 27/261 (10%), Positives = 58/261 (22%), Gaps = 27/261 (10%)

Query: 3   TSFNIGLAAQLALEQRLST-VADNM----------------SNTDTVGFRTI-KVKFSEV 44
           +S    +  Q      L     +N                 +  +T G  +  KV+FS+ 
Sbjct: 300 SSLIQAVNGQHTQGTDLDGDTGNNFFEPVTHFKSASFGTKTAPANTTGSDSDVKVEFSDG 359

Query: 45  VGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALE------GDAWFALESPRGI 98
                   D       +     +         GT  D+ L             + +P   
Sbjct: 360 TDKSITIPDGTTFEGVAEAINDANVGVKATVAGTSGDYELRIASTDPDTTITTITNPSSN 419

Query: 99  ILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158
           + +    +     G               +        D        G  ++K       
Sbjct: 420 LQSPLLSWTQDGGGGDSGLQLAIENTGDIAAGESDAPGDNRNAQKMAGLKNEKMVNGRYT 479

Query: 159 GLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
            +         V         N              ++   E S  +    M ++    +
Sbjct: 480 AIDFYGKVAADVGVAGQQNDFNRSSFQNTVDQLEARRQ---EISGVSINESMIKLQRYQK 536

Query: 219 KFNSITTLIDENEKSMLEAIR 239
            F +    +   ++ M   + 
Sbjct: 537 AFQASAQYLTTADEMMQTLLN 557


>gi|170722895|ref|YP_001750583.1| flagellar basal body rod protein FlgB [Pseudomonas putida W619]
 gi|169760898|gb|ACA74214.1| flagellar basal-body rod protein FlgB [Pseudomonas putida W619]
          Length = 136

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 27/98 (27%), Gaps = 2/98 (2%)

Query: 17  QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76
           QR   +A+N++N DT  ++   + FS V+ A          F          E       
Sbjct: 21  QRAEVLANNIANADTPNYKARDMDFSSVLAAESQKQQSGGRFAMDRTNSRHIEAEGLAMA 80

Query: 77  GTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSL 114
              L +           +    I      +     G  
Sbjct: 81  DDTLQYRTPTQPSIDQNTVDAQI--EQSNYTENAIGFQ 116


>gi|238758104|ref|ZP_04619284.1| hypothetical protein yaldo0001_12400 [Yersinia aldovae ATCC
          35236]
 gi|238703642|gb|EEP96179.1| hypothetical protein yaldo0001_12400 [Yersinia aldovae ATCC
          35236]
          Length = 555

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 1  MQTSF-NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
          M  S  N  ++   A +  LSTV++N++N    G+      F++
Sbjct: 1  MSNSLMNTAMSGLSAAQYALSTVSNNITNFQVAGYNRQNAIFAQ 44


>gi|227876730|ref|ZP_03994839.1| possible flagellar hook-associated protein FlgK [Mobiluncus
          mulieris ATCC 35243]
 gi|269976257|ref|ZP_06183253.1| putative flagellar hook-associated protein FlgK [Mobiluncus
          mulieris 28-1]
 gi|227842627|gb|EEJ52827.1| possible flagellar hook-associated protein FlgK [Mobiluncus
          mulieris ATCC 35243]
 gi|269935586|gb|EEZ92124.1| putative flagellar hook-associated protein FlgK [Mobiluncus
          mulieris 28-1]
          Length = 1034

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 20/42 (47%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44
          +S N GL    A ++ +     N+ N +T G+   +V+   +
Sbjct: 6  SSLNAGLTGLYAAQRLIEVSGQNIINQNTPGYTRQRVEQKAL 47



 Score = 39.9 bits (91), Expect = 0.30,   Method: Composition-based stats.
 Identities = 4/39 (10%), Positives = 11/39 (28%)

Query: 201  DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             S+ +   E+  +I     +     +       +   I 
Sbjct: 993  QSSVDMNEEVMNLIRGQHAYAGAARITSTVNSMLETLIN 1031


>gi|188592114|ref|YP_001796712.1| flagellar basal body rod protein flgb [Cupriavidus taiwanensis
          LMG 19424]
 gi|170938488|emb|CAP63475.1| FlgB: Flagellar basal-body rod protein [Cupriavidus taiwanensis
          LMG 19424]
          Length = 135

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/75 (17%), Positives = 25/75 (33%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR S +A N+++ DT G++     FS  +        +      S         
Sbjct: 15 ALSLRNQRQSVIASNIAHADTPGYKARDFDFSSTLAQTVERGHRNEGMSLSTTSVRHLPA 74

Query: 71 GSFISTGTELDFALE 85
           +      +L + + 
Sbjct: 75 QAPGREEFDLAYRIP 89


>gi|146341929|ref|YP_001206977.1| putative flagellar hook-associated protein FlgK [Bradyrhizobium
          sp. ORS278]
 gi|146194735|emb|CAL78760.1| putative flagellar hook-associated protein 1 (HAP1, FlgK protein)
          [Bradyrhizobium sp. ORS278]
          Length = 621

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/81 (13%), Positives = 28/81 (34%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
          ++    ++   + +  LS ++ N++N +T G+        EV                  
Sbjct: 5  SALATAMSGLRSTQAALSIISSNVANANTPGYVAQNPNQIEVASGGFGSTVMTTGVNRQL 64

Query: 63 KEYLSKEVGSFISTGTELDFA 83
            ++  ++ +  S G   D  
Sbjct: 65 DLFVQNQLRTETSGGAYADQM 85



 Score = 36.8 bits (83), Expect = 2.8,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 29/73 (39%)

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
           Q FV ++ S  +     +  + +   T+K  F   +  N   EM  +I +   + +   +
Sbjct: 546 QQFVSQQGSASTLATQLSQGQSVVVATLKEKFQSTAGVNMDSEMSNLIQVQNTYAANAHI 605

Query: 227 IDENEKSMLEAIR 239
           +   +  M   ++
Sbjct: 606 MSVVQSMMQSLLQ 618


>gi|86157770|ref|YP_464555.1| flagellar hook-associated protein [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85774281|gb|ABC81118.1| flagellar hook-associated protein [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 469

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 5/38 (13%), Positives = 15/38 (39%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            S  +   E+ +M    + + +I+ +I    +     +
Sbjct: 429 ASGVSVDEELLEMERAQRAYEAISKVIQATSEMFDTLL 466



 Score = 37.2 bits (84), Expect = 2.3,   Method: Composition-based stats.
 Identities = 5/44 (11%), Positives = 15/44 (34%)

Query: 23 ADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66
          + N+ N +T G+   +   +  + A +          +  +   
Sbjct: 26 SHNLQNANTPGYARQRAVLATTLPAEQAGGAWIGRGASLAQVTQ 69


>gi|332994164|gb|AEF04219.1| flagellar basal-body rod protein FlgC [Alteromonas sp. SN2]
          Length = 140

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 20/43 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N + EM  M+  ++ + +   + D  ++     ++
Sbjct: 93  GYIYKPNVNIVEEMANMMSASKAYETNVQVADTTKRIFRRVLQ 135



 Score = 37.2 bits (84), Expect = 2.3,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 23/60 (38%), Gaps = 6/60 (10%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56
             +I      A   RL+T A N++N ++V       +R     F+  +     D  + +
Sbjct: 5  NVMSISSTGMEAENVRLNTTASNIANANSVSSSYDETYRARHPVFAAELQRAMGDQSKGV 64


>gi|168333623|ref|ZP_02691883.1| flagellar hook-associated protein FlgK [Epulopiscium sp. 'N.t.
          morphotype B']
          Length = 578

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 9/76 (11%), Positives = 19/76 (25%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
              ++   A ++ L     N++N +T G+   ++   E               V  G  
Sbjct: 3  LTTTVSGLTAAQKGLMVTGHNLANINTPGYTRQQLLQHETGYRDVRKYGGYTQQVGMGVS 62

Query: 65 YLSKEVGSFISTGTEL 80
                          
Sbjct: 63 ETEIRQIRDNFADERY 78


>gi|327399356|ref|YP_004340225.1| flagellar basal-body rod protein FlgB [Hippea maritima DSM 10411]
 gi|327181985|gb|AEA34166.1| flagellar basal-body rod protein FlgB [Hippea maritima DSM 10411]
          Length = 132

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 21/42 (50%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
                 R   +A N++N DT  ++   + F++++   +ND+
Sbjct: 15 GLDVANLRQDLIASNIANADTPNYKAKHIPFNDILKLRQNDL 56


>gi|254499115|ref|ZP_05111805.1| flagellar basal-body rod protein FlgC [Legionella drancourtii
           LLAP12]
 gi|254351654|gb|EET10499.1| flagellar basal-body rod protein FlgC [Legionella drancourtii
           LLAP12]
          Length = 140

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 8/58 (13%), Positives = 25/58 (43%)

Query: 182 PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           P    +       K+G++     +++ EM  ++  ++ + +   +I+      L+A+ 
Sbjct: 78  PSKVYQPGHPAADKQGYVNYPGVSTIDEMTTLLRASRAYEANIKIINSAHSLYLQALS 135



 Score = 35.2 bits (79), Expect = 8.4,   Method: Composition-based stats.
 Identities = 7/22 (31%), Positives = 12/22 (54%)

Query: 7  IGLAAQLALEQRLSTVADNMSN 28
          I      A + R+  VA+N++N
Sbjct: 9  IASQGMNAEKLRVDVVANNIAN 30


>gi|166712065|ref|ZP_02243272.1| flagellar basal body rod protein FlgB [Xanthomonas oryzae pv.
          oryzicola BLS256]
          Length = 133

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 26/55 (47%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65
          A    EQR+  +A N+SN DT G++   + F   + + + + D  +      K Y
Sbjct: 15 ALALREQRMKLIASNLSNVDTPGYKAKDLNFEAALKSAQGEQDGGLMQTTDAKHY 69


>gi|325291941|ref|YP_004277805.1| flagellar basal body rod protein FlgC [Agrobacterium sp. H13-3]
 gi|325059794|gb|ADY63485.1| flagellar basal body rod protein FlgC [Agrobacterium sp. H13-3]
          Length = 139

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 9/68 (13%), Positives = 24/68 (35%)

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
           G+         +  +      G ++  N N + EM  M    + +++   +I +    + 
Sbjct: 70  GVDRGDFVHEYDPGNPAADTSGMVKMPNVNVLIEMADMREANRSYDANLQVIRQTRDLVA 129

Query: 236 EAIRNIAS 243
             I  + +
Sbjct: 130 STIDLLKA 137



 Score = 40.6 bits (93), Expect = 0.20,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 20/51 (39%), Gaps = 7/51 (13%)

Query: 7  IGLAAQLALEQRLSTVADNMSNT----DTVG---FRTIKVKFSEVVGAIKN 50
          I  +       RL  V++N++N     DT G   +R   V F   +  +  
Sbjct: 10 IAGSGLEVQSTRLRIVSENIANARSTGDTPGADPYRRKTVTFGSELDRVSG 60


>gi|319787123|ref|YP_004146598.1| flagellar basal-body rod protein FlgC [Pseudoxanthomonas suwonensis
           11-1]
 gi|317465635|gb|ADV27367.1| flagellar basal-body rod protein FlgC [Pseudoxanthomonas suwonensis
           11-1]
          Length = 135

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 19/37 (51%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           G++   + + + +M  MI  ++ + +   +I+  ++ 
Sbjct: 90  GYVFAPDVDPVSQMVNMISASRSYQAGVEIINTAKEL 126



 Score = 36.4 bits (82), Expect = 3.1,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 36/101 (35%), Gaps = 10/101 (9%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKISF 58
           F++  +A  A   RLST+A N++N D V       ++ ++  F     A  +  D  ++ 
Sbjct: 7   FDVAGSALQAQSVRLSTIASNLANADAVAGSPEAVYKPLEPVFQ----AQASGSDPALTG 62

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
           V   +   S                 +G  +     P   +
Sbjct: 63  VRVREIAQSDAPPVRRYEPGHPLADADGYVFAPDVDPVSQM 103


>gi|284041506|ref|YP_003391846.1| flagellar basal-body rod protein FlgB [Conexibacter woesei DSM
          14684]
 gi|283945727|gb|ADB48471.1| flagellar basal-body rod protein FlgB [Conexibacter woesei DSM
          14684]
          Length = 117

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 8/50 (16%), Positives = 20/50 (40%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFV 59
          +A      R   + +N++N +T G++   + F   + A +   +      
Sbjct: 13 SALRGSSMRQELLTNNLANINTPGYQRQDLDFHSALQAAQASGNDPTEVT 62


>gi|302392399|ref|YP_003828219.1| flagellar basal-body rod protein FlgB [Acetohalobium arabaticum
          DSM 5501]
 gi|302204476|gb|ADL13154.1| flagellar basal-body rod protein FlgB [Acetohalobium arabaticum
          DSM 5501]
          Length = 135

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 28/71 (39%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
            S ++   A   L+QR   +++N++N DT  ++   V F   +    N+    ++    
Sbjct: 7  NQSISVLTKALDGLQQRQEAISNNIANVDTPDYKRKDVNFKSELKTALNNDSTGLTATHK 66

Query: 62 GKEYLSKEVGS 72
               +  +  
Sbjct: 67 NHFSTNSNLDQ 77


>gi|238922534|ref|YP_002936047.1| flagellar hook-associated protein FlgK [Eubacterium rectale ATCC
          33656]
 gi|238874206|gb|ACR73913.1| flagellar hook-associated protein FlgK [Eubacterium rectale ATCC
          33656]
          Length = 617

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 19/40 (47%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
            +IG +A  + +   +T A+N++N  T G+   +     
Sbjct: 7  GLHIGSSALSSFQVATNTTANNIANVKTTGYTRQEATLQA 46


>gi|219684499|ref|ZP_03539442.1| flagellar hook-associated protein FlgK [Borrelia garinii PBr]
 gi|219671861|gb|EED28915.1| flagellar hook-associated protein FlgK [Borrelia garinii PBr]
          Length = 627

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 16/41 (39%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E+  MI   Q F + +  I  + + +   I  + 
Sbjct: 586 SGVNKDEELANMIEFQQAFIAASKFITVSAELIDTVINKMG 626



 Score = 35.2 bits (79), Expect = 7.4,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 19/46 (41%), Gaps = 3/46 (6%)

Query: 1  MQT---SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
          M +      IG  +  A +  ++TV  N+SN    G+   +V    
Sbjct: 1  MDSTFSGIEIGKRSLFAHKDAMNTVGHNLSNATKPGYSRQRVIMKT 46


>gi|58582192|ref|YP_201208.1| flagellar basal body rod protein FlgB [Xanthomonas oryzae pv.
          oryzae KACC10331]
 gi|84624085|ref|YP_451457.1| flagellar basal body rod protein FlgB [Xanthomonas oryzae pv.
          oryzae MAFF 311018]
 gi|58426786|gb|AAW75823.1| flagellar protein [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84368025|dbj|BAE69183.1| flagellar protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
          Length = 132

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 26/55 (47%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65
          A    EQR+  +A N+SN DT G++   + F   + + + + D  +      K Y
Sbjct: 15 ALALREQRMKLIASNLSNVDTPGYKAKDLNFEAALKSAQGEQDGGLMQTTDAKHY 69


>gi|219685806|ref|ZP_03540615.1| flagellar hook-associated protein FlgK [Borrelia garinii Far04]
 gi|219672639|gb|EED29669.1| flagellar hook-associated protein FlgK [Borrelia garinii Far04]
          Length = 627

 Score = 46.0 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 16/41 (39%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E+  MI   Q F + +  I  + + +   I  + 
Sbjct: 586 SGVNKDEELANMIEFQQAFIAASKFITVSAELIDTVINKMG 626



 Score = 35.6 bits (80), Expect = 6.0,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 19/46 (41%), Gaps = 3/46 (6%)

Query: 1  MQT---SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
          M +      IG  +  A +  ++TV  N+SN    G+   +V    
Sbjct: 1  MDSTFSGIEIGKRSLFAHKDAMNTVGHNLSNATKPGYSRQRVTMKT 46


>gi|111115003|ref|YP_709621.1| flagellar hook-associated protein FlgK [Borrelia afzelii PKo]
 gi|110890277|gb|ABH01445.1| flagellar hook-associated protein [Borrelia afzelii PKo]
          Length = 627

 Score = 46.0 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 16/41 (39%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E+  MI   Q F + +  I  + + +   I  + 
Sbjct: 586 SGVNKDEELANMIEFQQAFIAASKFITVSAELIDTVINKMG 626



 Score = 36.8 bits (83), Expect = 2.9,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 23/57 (40%), Gaps = 3/57 (5%)

Query: 1  MQT---SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54
          M +      IG  +  A +  ++TV  N+SN    G+   +V     +      +++
Sbjct: 1  MDSTFSGIEIGKRSLFAHKDAMNTVGHNLSNATKPGYSRQRVTMKTAIPLYAPQLNR 57


>gi|49077262|gb|AAT49657.1| PA1077 [synthetic construct]
          Length = 136

 Score = 46.0 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 29/76 (38%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
            +  I   A     QR   +A+N++N DT  ++   + F+ V+   K+   +      +
Sbjct: 6  DRALGIHQQALSFRAQRAEVLANNLANADTPNYKARDLDFAAVLAEQKDKAAKGTFATRT 65

Query: 62 GKEYLSKEVGSFISTG 77
            E      G  +  G
Sbjct: 66 TNERHIAAEGFGMGEG 81


>gi|322832570|ref|YP_004212597.1| flagellar hook-associated protein FlgK [Rahnella sp. Y9602]
 gi|321167771|gb|ADW73470.1| flagellar hook-associated protein FlgK [Rahnella sp. Y9602]
          Length = 550

 Score = 46.0 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 18/40 (45%), Gaps = 1/40 (2%)

Query: 1  MQTSF-NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39
          M +S  N  ++   A +  LST  +N++N    G+     
Sbjct: 1  MSSSLINTAMSGLNAAQAALSTTGNNIANVSVAGYNRQTA 40


>gi|288573036|ref|ZP_06391393.1| flagellar basal-body rod protein FlgB [Dethiosulfovibrio
          peptidovorans DSM 11002]
 gi|288568777|gb|EFC90334.1| flagellar basal-body rod protein FlgB [Dethiosulfovibrio
          peptidovorans DSM 11002]
          Length = 131

 Score = 46.0 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 22/60 (36%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
             L  R  +V  N++N +T G+   +V F + +  I N   +        K   +    
Sbjct: 13 LQGLAHRFRSVGQNLANANTPGYARREVSFEDQLDDIVNGPKRLPMATTDPKHMTTHARS 72


>gi|319781683|ref|YP_004141159.1| flagellar basal-body rod protein FlgC [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317167571|gb|ADV11109.1| flagellar basal-body rod protein FlgC [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 138

 Score = 46.0 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 7/42 (16%), Positives = 18/42 (42%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G+++  N N + EM  M    + + +   ++ +    +   I
Sbjct: 91  GYVKMPNVNVLIEMADMTEANRSYEANLQVVKQARDLISMTI 132



 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 13/104 (12%), Positives = 33/104 (31%), Gaps = 8/104 (7%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKF-SEVVGAIKNDIDQK 55
           +  +  +   A  +RL  V++N++N  + G       +R   + F SE+  A  +     
Sbjct: 7   ALKVAASGLGAQSERLRVVSENLANAQSTGTAPGSDPYRRKTISFVSELDRASGSSTVAV 66

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
            S      ++  +      +   +    +         +     
Sbjct: 67  NSIDRDPSDFPVEFQPGNEAADEKGYVKMPNVNVLIEMADMTEA 110


>gi|216263829|ref|ZP_03435823.1| flagellar hook-associated protein FlgK [Borrelia afzelii ACA-1]
 gi|215979873|gb|EEC20695.1| flagellar hook-associated protein FlgK [Borrelia afzelii ACA-1]
          Length = 627

 Score = 46.0 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 16/41 (39%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E+  MI   Q F + +  I  + + +   I  + 
Sbjct: 586 SGVNKDEELANMIEFQQAFIAASKFITVSAELIDTVINKMG 626



 Score = 36.8 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 23/57 (40%), Gaps = 3/57 (5%)

Query: 1  MQT---SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54
          M +      IG  +  A +  ++TV  N+SN    G+   +V     +      +++
Sbjct: 1  MDSTFSGIEIGKRSLFAHKDAMNTVGHNLSNATKPGYSRQRVTMKTAIPLYAPQLNR 57


>gi|116049015|ref|YP_792183.1| flagellar hook-associated protein FlgK [Pseudomonas aeruginosa
          UCBPP-PA14]
 gi|115584236|gb|ABJ10251.1| flagellar hook-associated protein 1 FlgK [Pseudomonas aeruginosa
          UCBPP-PA14]
          Length = 683

 Score = 46.0 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 10/52 (19%), Positives = 17/52 (32%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M    +IGL+     +  L+    N++N  T G+          V       
Sbjct: 1  MSDLLSIGLSGLGTSQTWLTITGHNITNVKTPGYSRQDAIQQTQVPQFSGAG 52


>gi|255017933|ref|ZP_05290059.1| flagellar basal body rod protein FlgB [Listeria monocytogenes FSL
          F2-515]
          Length = 96

 Score = 46.0 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 20/45 (44%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56
             L+     V++N++N +T  F+  +  F E +G+      Q  
Sbjct: 1  MNYLQTANQVVSNNIANANTPNFKASEASFEESLGSSLRASGQNS 45


>gi|224532252|ref|ZP_03672884.1| flagellar hook-associated protein FlgK [Borrelia valaisiana VS116]
 gi|224511717|gb|EEF82123.1| flagellar hook-associated protein FlgK [Borrelia valaisiana VS116]
          Length = 627

 Score = 46.0 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 16/41 (39%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E+  MI   Q F + +  I  + + +   I  + 
Sbjct: 586 SGVNKDEELANMIEFQQAFIAASKFITVSAELIDTVINKMG 626



 Score = 35.6 bits (80), Expect = 6.0,   Method: Composition-based stats.
 Identities = 12/83 (14%), Positives = 27/83 (32%), Gaps = 3/83 (3%)

Query: 1  MQT---SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS 57
          M +      IG  +  A +  ++TV  N+SN    G+   +V            +++   
Sbjct: 1  MDSTFSGIEIGKRSLFAHKDAMNTVGHNLSNATKPGYSRQRVTMKTTTPLYAPQLNRAKK 60

Query: 58 FVASGKEYLSKEVGSFISTGTEL 80
              G+  + + +          
Sbjct: 61 QGQLGQGIMVQSIDRVKDELLNT 83


>gi|15596274|ref|NP_249768.1| flagellar basal body rod protein FlgB [Pseudomonas aeruginosa
          PAO1]
 gi|107100522|ref|ZP_01364440.1| hypothetical protein PaerPA_01001547 [Pseudomonas aeruginosa
          PACS2]
 gi|116049006|ref|YP_792192.1| flagellar basal body rod protein FlgB [Pseudomonas aeruginosa
          UCBPP-PA14]
 gi|218892959|ref|YP_002441828.1| flagellar basal body rod protein FlgB [Pseudomonas aeruginosa
          LESB58]
 gi|254234213|ref|ZP_04927536.1| flagellar basal-body rod protein FlgB [Pseudomonas aeruginosa
          C3719]
 gi|254239435|ref|ZP_04932757.1| flagellar basal-body rod protein FlgB [Pseudomonas aeruginosa
          2192]
 gi|296390559|ref|ZP_06880034.1| flagellar basal body rod protein FlgB [Pseudomonas aeruginosa
          PAb1]
 gi|313106032|ref|ZP_07792291.1| flagellar basal-body rod protein FlgB [Pseudomonas aeruginosa
          39016]
 gi|9946993|gb|AAG04466.1|AE004539_8 flagellar basal-body rod protein FlgB [Pseudomonas aeruginosa
          PAO1]
 gi|115584227|gb|ABJ10242.1| flagellar basal-body rod protein FlgB [Pseudomonas aeruginosa
          UCBPP-PA14]
 gi|126166144|gb|EAZ51655.1| flagellar basal-body rod protein FlgB [Pseudomonas aeruginosa
          C3719]
 gi|126192813|gb|EAZ56876.1| flagellar basal-body rod protein FlgB [Pseudomonas aeruginosa
          2192]
 gi|218773187|emb|CAW28999.1| flagellar basal-body rod protein FlgB [Pseudomonas aeruginosa
          LESB58]
 gi|310878793|gb|EFQ37387.1| flagellar basal-body rod protein FlgB [Pseudomonas aeruginosa
          39016]
          Length = 135

 Score = 46.0 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 29/76 (38%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
            +  I   A     QR   +A+N++N DT  ++   + F+ V+   K+   +      +
Sbjct: 6  DRALGIHQQALSFRAQRAEVLANNLANADTPNYKARDLDFAAVLAEQKDKAAKGTFATRT 65

Query: 62 GKEYLSKEVGSFISTG 77
            E      G  +  G
Sbjct: 66 TNERHIAAEGFGMGEG 81


>gi|56964036|ref|YP_175767.1| flagellar basal body rod protein FlgC [Bacillus clausii KSM-K16]
 gi|56910279|dbj|BAD64806.1| flagellar basal-body rod protein FlgC [Bacillus clausii KSM-K16]
          Length = 148

 Score = 46.0 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 7/42 (16%), Positives = 20/42 (47%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N     EM  +   T+ + +  T +  ++  +++A+
Sbjct: 103 GYVSKPNVEIAREMVDITSATRSYEANVTALQASKGMVMKAL 144



 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 31/100 (31%), Gaps = 10/100 (10%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M +S N+  +       R+   A N++N DT   R  +V               +   V 
Sbjct: 3   MFSSMNVSGSGLTLQRLRMDVAASNIANADTT--RAERVN--------GEWQPYQRRMVV 52

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL 100
            G   + +          ELD  +         +P  ++ 
Sbjct: 53  QGPTSMGRFSSDLQKATAELDQGVVAKQIVRDPTPATLVY 92


>gi|303327773|ref|ZP_07358213.1| putative flagellar basal-body rod protein [Desulfovibrio sp.
           3_1_syn3]
 gi|302862134|gb|EFL85068.1| putative flagellar basal-body rod protein [Desulfovibrio sp.
           3_1_syn3]
          Length = 133

 Score = 46.0 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/103 (14%), Positives = 33/103 (32%), Gaps = 1/103 (0%)

Query: 137 DEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN-IPPTPLEDLSGVTVK 195
             + NV   G   Q        G   V +         +G  P  +   P    +  +++
Sbjct: 27  HNVANVNTAGFAPQHAVYATGPGGRGVRLDAVLQDSGVAGRLPAEVRNNPAVSTAPASME 86

Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
             F+     +   EM QMI   + + +   ++   +  +   +
Sbjct: 87  SDFVNPGGTDLGREMTQMISTQRTYEANAQVVRTGDAMLGTLL 129



 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 34/104 (32%), Gaps = 4/104 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID----QKISFV 59
           S N+G +A  A    ++  A N++N +T GF      ++   G     +D          
Sbjct: 7   SMNLGASAMNAHSWGMAVTAHNVANVNTAGFAPQHAVYATGPGGRGVRLDAVLQDSGVAG 66

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103
               E  +    S      E DF   G      E  + I   R 
Sbjct: 67  RLPAEVRNNPAVSTAPASMESDFVNPGGTDLGREMTQMISTQRT 110


>gi|94263245|ref|ZP_01287062.1| Flagellar basal-body rod protein FlgC [delta proteobacterium
           MLMS-1]
 gi|93456463|gb|EAT06583.1| Flagellar basal-body rod protein FlgC [delta proteobacterium
           MLMS-1]
          Length = 144

 Score = 46.0 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 20/42 (47%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G +   N N+  +M  M++  + + +    +D  ++  L A+
Sbjct: 99  GIVRYPNVNTAEQMVDMMNARRSYEANVAALDAVKEMALRAL 140



 Score = 38.7 bits (88), Expect = 0.73,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 8/51 (15%)

Query: 1  MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43
          M   T+ NI  +A  A   RL+  + NM+N +T     G  +R   V F  
Sbjct: 1  MDILTAMNISGSALKAERSRLNIASMNMANANTTRTVEGGPYRAKSVVFEA 51


>gi|90423029|ref|YP_531399.1| flagellar basal body rod protein FlgC [Rhodopseudomonas palustris
           BisB18]
 gi|90105043|gb|ABD87080.1| flagellar basal-body rod protein FlgC [Rhodopseudomonas palustris
           BisB18]
          Length = 141

 Score = 46.0 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 8/58 (13%), Positives = 21/58 (36%)

Query: 186 LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
            E  +      G ++  N N + EM  M    + + +   +I    + +   +  + +
Sbjct: 84  YEPGNPAADAAGNVKYPNVNPLVEMTDMRDAQRSYEANLNIISATRRMIQRTLDILKA 141



 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 22/59 (37%), Gaps = 9/59 (15%)

Query: 1  MQ--TSFNIGLAAQLALEQRLSTVADNMSN----TDTVG---FRTIKVKFSEVVGAIKN 50
          M    S  I  +   A   R+  +++N++N      T G   +R     F+  +    +
Sbjct: 6  MDFSRSMGIATSGLRAQAARMRVISENIANAESTAQTPGGDPYRRKVPTFTSALDRALD 64


>gi|114330367|ref|YP_746589.1| flagellar hook-associated protein FlgK [Nitrosomonas eutropha
          C91]
 gi|114307381|gb|ABI58624.1| flagellar hook-associated protein FlgK [Nitrosomonas eutropha
          C91]
          Length = 467

 Score = 46.0 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 1  MQTS-FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39
          M  S  N+G++   A +  L T + N+SN  T G+   + 
Sbjct: 1  MANSIMNVGVSGLQAAQTALLTTSHNISNATTPGYNRQQA 40


>gi|251772404|gb|EES52971.1| flagellar hook-associated protein FlgK [Leptospirillum
          ferrodiazotrophum]
          Length = 559

 Score = 46.0 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 27/76 (35%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
           NIG     A E  L T   N+SN +T G+   +V   + V  + +         A+   
Sbjct: 8  MNIGQTGIEANEAALKTAGHNLSNVNTPGYSRERVMLEQHVPDMGHPGMMGAGVDAARIR 67

Query: 65 YLSKEVGSFISTGTEL 80
           +        ST  + 
Sbjct: 68 RVVNHFLENQSTRQKT 83


>gi|227328344|ref|ZP_03832368.1| flagellar hook-associated protein FlgK [Pectobacterium
          carotovorum subsp. carotovorum WPP14]
          Length = 564

 Score = 46.0 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/74 (17%), Positives = 29/74 (39%), Gaps = 2/74 (2%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA--IKNDIDQKISF 58
          M    N  ++     +  LSTV++N+SN   +G+        + + +      I   ++ 
Sbjct: 1  MSNLINTAMSGLKGAQVALSTVSNNISNQAVIGYSRQNAILEQAISSSTSAGYIGNGVNV 60

Query: 59 VASGKEYLSKEVGS 72
          V+  ++Y       
Sbjct: 61 VSINRQYNEFITNQ 74


>gi|116694216|ref|YP_728427.1| flagellar basal body rod protein FlgB [Ralstonia eutropha H16]
 gi|113528715|emb|CAJ95062.1| flagellar basal body protein [Ralstonia eutropha H16]
          Length = 135

 Score = 46.0 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/75 (17%), Positives = 25/75 (33%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR S +A N+++ DT G++     FS  +        +      S         
Sbjct: 15 ALSLRNQRQSVIASNIAHADTPGYKARDFDFSSTLAQSVERGHRNEGMSLSTTSVRHLPA 74

Query: 71 GSFISTGTELDFALE 85
           +      +L + + 
Sbjct: 75 QAPGREEFDLAYRIP 89


>gi|103488385|ref|YP_617946.1| flagellar basal-body rod protein FlgC [Sphingopyxis alaskensis
           RB2256]
 gi|98978462|gb|ABF54613.1| flagellar basal-body rod protein FlgC [Sphingopyxis alaskensis
           RB2256]
          Length = 267

 Score = 46.0 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 42/117 (35%), Gaps = 9/117 (7%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVV---GAIKNDIDQK 55
           F+I   A  A   RL+T A N++N  TV       FR++K  F  V+   G     IDQ 
Sbjct: 141 FDISGRAMSAQLVRLNTTASNLANAGTVAGSEAGAFRSLKPVFRTVMDDHGRATVQIDQI 200

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDG 112
            +   +  +          + G   + A++  A              + +   T  G
Sbjct: 201 TTSKMAPSKRHDPSNPLADADGNVWEAAVDSAAELVEMVETARQYQNNVQVLETAKG 257



 Score = 42.5 bits (98), Expect = 0.055,   Method: Composition-based stats.
 Identities = 5/36 (13%), Positives = 19/36 (52%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +S  E+ +M+   +++ +   +++  +  + E +R
Sbjct: 229 VDSAAELVEMVETARQYQNNVQVLETAKGLINETLR 264


>gi|261420582|ref|YP_003254264.1| flagellar hook-associated protein FlgK [Geobacillus sp. Y412MC61]
 gi|319768252|ref|YP_004133753.1| flagellar hook-associated protein FlgK [Geobacillus sp. Y412MC52]
 gi|261377039|gb|ACX79782.1| flagellar hook-associated protein FlgK [Geobacillus sp. Y412MC61]
 gi|317113118|gb|ADU95610.1| flagellar hook-associated protein FlgK [Geobacillus sp. Y412MC52]
          Length = 531

 Score = 46.0 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/68 (16%), Positives = 26/68 (38%), Gaps = 3/68 (4%)

Query: 1  MQTSFN---IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS 57
          M ++F+         +A +  L T + N++N +T G+   +V+           +++   
Sbjct: 1  MLSTFHGLEAARRGMMAQQAALYTTSHNIANANTEGYTRQRVQLQPTPPFPTPGLNRPNI 60

Query: 58 FVASGKEY 65
              G   
Sbjct: 61 PGQMGTGV 68



 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 17/41 (41%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S+ +   EM  M+     +N+    I   ++ + + I  + 
Sbjct: 487 SSVSLDEEMMNMVKFQHAYNAAARQITVIDEMLDKLINGMG 527


>gi|144899352|emb|CAM76216.1| Flagellar hook-associated protein [Magnetospirillum
          gryphiswaldense MSR-1]
          Length = 939

 Score = 46.0 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 19/40 (47%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
            N  L+  L  ++ L TVA N++N +T G+    +    
Sbjct: 6  GLNTALSGLLTNQRALDTVAQNVTNVNTKGYVRKVMNQES 45



 Score = 39.5 bits (90), Expect = 0.42,   Method: Composition-based stats.
 Identities = 7/37 (18%), Positives = 15/37 (40%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N   E+  MI   Q +++   +I   ++ +    
Sbjct: 899 SGVNLDEEVSAMIDFQQAYSATAKVITVLQEMLETLT 935


>gi|85716543|ref|ZP_01047513.1| flagellar basal body rod protein [Nitrobacter sp. Nb-311A]
 gi|85696544|gb|EAQ34432.1| flagellar basal body rod protein [Nitrobacter sp. Nb-311A]
          Length = 141

 Score = 46.0 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 23/56 (41%), Gaps = 7/56 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTD----TVG---FRTIKVKFSEVVGAIKN 50
            S +I  +   A   R+  +++N++N D    T G   +R     FS  +    +
Sbjct: 9  MRSMSIATSGLRAQAGRMRVISENIANVDSTAQTPGGDPYRRKVPTFSSALDRTLD 64



 Score = 44.5 bits (103), Expect = 0.015,   Method: Composition-based stats.
 Identities = 9/49 (18%), Positives = 21/49 (42%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
             G ++  N NS+ EM  M +  + + +   +I    + +   +  + S
Sbjct: 93  ASGNVKYPNVNSLVEMTDMRNAQRSYEANLNIISATRRMIQRTLDILKS 141


>gi|326204629|ref|ZP_08194485.1| flagellar basal-body rod protein FlgB [Clostridium papyrosolvens
          DSM 2782]
 gi|325985196|gb|EGD46036.1| flagellar basal-body rod protein FlgB [Clostridium papyrosolvens
          DSM 2782]
          Length = 137

 Score = 46.0 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/83 (13%), Positives = 27/83 (32%), Gaps = 5/83 (6%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN-----DIDQKISFVASGKEY 65
          +  A   R   ++ N++N DT  ++   V F E +    +             +    + 
Sbjct: 15 SLNASWARNEVISQNLANVDTPNYKRKDVTFEEYLNDSLDSKRLEGNTTDERHIPIKSKN 74

Query: 66 LSKEVGSFISTGTELDFALEGDA 88
            K         ++    ++G+ 
Sbjct: 75 TDKIKPEITQDNSDTSMRIDGNN 97


>gi|152997584|ref|YP_001342419.1| flagellar basal-body rod protein FlgC [Marinomonas sp. MWYL1]
 gi|150838508|gb|ABR72484.1| flagellar basal-body rod protein FlgC [Marinomonas sp. MWYL1]
          Length = 151

 Score = 46.0 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N M EM  M+  ++ F +   +++  +  M + + 
Sbjct: 105 GYVFYPNVNPMEEMADMMSASRSFQTNVEIMNSAKSMMQKMLT 147


>gi|54307268|ref|YP_128288.1| FlgC flagellar basal-body rod protein [Photobacterium profundum
           SS9]
 gi|46911688|emb|CAG18486.1| Hypothetical FlgC flagellar basal-body rod protein [Photobacterium
           profundum SS9]
          Length = 138

 Score = 46.0 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 23/46 (50%), Gaps = 1/46 (2%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G++  S  N + EM  M+  ++ F +   ++    +SM ++I  + 
Sbjct: 92  GYVFHSTVNVVEEMADMMAASRNFETNVNVMSRA-RSMQQSILRLG 136



 Score = 39.5 bits (90), Expect = 0.45,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 28/77 (36%), Gaps = 6/77 (7%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDT------VGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          I  +A  A   RL+TVA N++N D        G+   +  FS V+  + + +      + 
Sbjct: 9  IAGSAMSAQTIRLNTVASNLANADVVSGSDKTGYHAKRPVFSTVMIDMDSPVPGAKVQID 68

Query: 61 SGKEYLSKEVGSFISTG 77
             E        +    
Sbjct: 69 DVIESTEPLRRRYEPNH 85


>gi|37360906|dbj|BAC98360.1| flagellar hook protein [Burkholderia glumae]
          Length = 40

 Score = 46.0 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 4/39 (10%), Positives = 13/39 (33%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +S  +   E+  +I   + + +    I   +      + 
Sbjct: 1   NSTVDLTGELVNLITAQRNYQANAQTIKTQQTVDQTLLN 39


>gi|188576753|ref|YP_001913682.1| flagellar basal body rod protein FlgB [Xanthomonas oryzae pv.
          oryzae PXO99A]
 gi|188576944|ref|YP_001913873.1| flagellar basal body rod protein FlgB [Xanthomonas oryzae pv.
          oryzae PXO99A]
 gi|188521205|gb|ACD59150.1| flagellar basal-body rod protein FlgB [Xanthomonas oryzae pv.
          oryzae PXO99A]
 gi|188521396|gb|ACD59341.1| flagellar basal-body rod protein FlgB [Xanthomonas oryzae pv.
          oryzae PXO99A]
          Length = 117

 Score = 46.0 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 25/54 (46%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65
              EQR+  +A N+SN DT G++   + F   + + + + D  +      K Y
Sbjct: 1  MALREQRMKLIASNLSNVDTPGYKAKDLNFEAALKSAQGEQDGGLMQTTDAKHY 54


>gi|330809235|ref|YP_004353697.1| flagellar basal-body rod protein flgC [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
 gi|327377343|gb|AEA68693.1| Putative Flagellar basal-body rod protein flgC [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 131

 Score = 46.0 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 10/87 (11%), Positives = 29/87 (33%)

Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEM 210
           +  +++     S     G  +      + +      E    +  + G +   N  +  EM
Sbjct: 40  RSPLLSVSPPTSFAGQLGLQQPRVHAQARSDSRLVHEPSHPMADQNGMVHYPNIEAAREM 99

Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEA 237
             ++  T+ + +     +   +  L+A
Sbjct: 100 ATLVSATRAYEANIRSYNSLREMTLKA 126


>gi|188590422|ref|YP_001920200.1| flagellar basal body rod protein FlgC [Clostridium botulinum E3
           str. Alaska E43]
 gi|188500703|gb|ACD53839.1| flagellar basal-body rod protein FlgC [Clostridium botulinum E3
           str. Alaska E43]
          Length = 135

 Score = 46.0 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 20/42 (47%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N N + EM  M+  T+ + +    ++  +    +A+
Sbjct: 90  GYVTMPNVNVLNEMADMMVSTRSYEANVETLNALKGMFSKAL 131



 Score = 38.3 bits (87), Expect = 0.94,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 32/107 (29%), Gaps = 7/107 (6%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTV----G---FRTIKVKFSEVVGAIKNDIDQKI 56
           S  I      A   R+ T+  NM+N  T     G   +      F E +   +     K 
Sbjct: 6   SMQISATGISAERLRMDTITSNMTNASTTRSADGSGPYVRKIAVFQEALDENRKMAGIKP 65

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103
           + +   K  L K          E  +    +     E    ++ TR 
Sbjct: 66  AKIVEDKSPLRKVYNPTHPDADETGYVTMPNVNVLNEMADMMVSTRS 112


>gi|71907892|ref|YP_285479.1| flagellar basal-body rod protein FlgB [Dechloromonas aromatica RCB]
 gi|71847513|gb|AAZ47009.1| Flagellar basal-body rod protein FlgB [Dechloromonas aromatica RCB]
          Length = 153

 Score = 46.0 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 29/78 (37%), Gaps = 2/78 (2%)

Query: 11  AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
              A  Q+L  +A N++N DT G++ + + F E +   ++      + +A+         
Sbjct: 33  GVRAYRQQL--IASNIANADTPGYKAVDIDFEEAMRIAQSASPIPPTMLATTSIGHISGE 90

Query: 71  GSFISTGTELDFALEGDA 88
                    L + +    
Sbjct: 91  AVSAQPPYPLKYQVPSQD 108


>gi|325289234|ref|YP_004265415.1| flagellar hook-associated protein FlgK [Syntrophobotulus
          glycolicus DSM 8271]
 gi|324964635|gb|ADY55414.1| flagellar hook-associated protein FlgK [Syntrophobotulus
          glycolicus DSM 8271]
          Length = 507

 Score = 46.0 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 9/50 (18%), Positives = 18/50 (36%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
                +     + +L+T   N+SN DT G+   +V  ++          
Sbjct: 7  GIATATSGLSVSQSQLNTTGHNISNADTAGYVRQQVVQTDASYLKSGQYQ 56



 Score = 36.8 bits (83), Expect = 2.9,   Method: Composition-based stats.
 Identities = 4/41 (9%), Positives = 14/41 (34%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  +   E+  ++     +N+   ++   +  +   I    
Sbjct: 463 SAVSMDEELANLLKYQHAYNASARVMSMIDGMLGRLIEETG 503


>gi|187918168|ref|YP_001883731.1| flagellar basal body rod protein FlgB [Borrelia hermsii DAH]
 gi|119861016|gb|AAX16811.1| flagellar basal-body rod protein FlgB [Borrelia hermsii DAH]
          Length = 135

 Score = 46.0 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/32 (40%), Positives = 17/32 (53%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
             L  R S +ADN++N DT  F+  KV F  
Sbjct: 15 LDVLSLRQSVIADNIANVDTPNFKRSKVTFEA 46


>gi|167770223|ref|ZP_02442276.1| hypothetical protein ANACOL_01566 [Anaerotruncus colihominis DSM
          17241]
 gi|167667545|gb|EDS11675.1| hypothetical protein ANACOL_01566 [Anaerotruncus colihominis DSM
          17241]
          Length = 120

 Score = 46.0 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 10/82 (12%), Positives = 25/82 (30%), Gaps = 1/82 (1%)

Query: 2  QTSFNIGL-AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           +     + ++   L    + +  N++N +T G++   VKF +V+               
Sbjct: 4  DSLAFQAMRSSLNGLAIEQNIILHNLANYETPGYKAKSVKFEDVLKESSRKDGSGRYDFK 63

Query: 61 SGKEYLSKEVGSFISTGTELDF 82
          +                 + D 
Sbjct: 64 ATVFEQEDTTMRPDGNNVDSDV 85


>gi|291288219|ref|YP_003505035.1| flagellar basal-body rod protein FlgB [Denitrovibrio acetiphilus
          DSM 12809]
 gi|290885379|gb|ADD69079.1| flagellar basal-body rod protein FlgB [Denitrovibrio acetiphilus
          DSM 12809]
          Length = 136

 Score = 46.0 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 27/72 (37%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
           +           +   +A+N++N DT G++   ++F +V+  +     +      + K 
Sbjct: 10 IDTLATGLRTASVKNGVIAENIANKDTPGYKAQDLEFYDVMDEVLGTGKKLPLTRTNEKH 69

Query: 65 YLSKEVGSFIST 76
                G   S+
Sbjct: 70 LPPAGRGVDPSS 81


>gi|254475034|ref|ZP_05088420.1| flagellar hook-associated protein FlgK [Ruegeria sp. R11]
 gi|214029277|gb|EEB70112.1| flagellar hook-associated protein FlgK [Ruegeria sp. R11]
          Length = 482

 Score = 46.0 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 20/38 (52%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
          ++ N  ++   A  ++ S V++N++N  T G+    V 
Sbjct: 5  SALNSAMSGLTAAGRQTSVVSENLANVLTPGYSRRSVA 42



 Score = 42.5 bits (98), Expect = 0.047,   Method: Composition-based stats.
 Identities = 11/85 (12%), Positives = 30/85 (35%), Gaps = 1/85 (1%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMI 214
           + T  L +  +S   + R                 +   +++  L     +S  E+  +I
Sbjct: 398 LGTANLDASTLSANLLSRFAQSEYSAQQNVAFAQATHTEMQQRQLAQG-VDSDAELQNLI 456

Query: 215 HLTQKFNSITTLIDENEKSMLEAIR 239
            + + + +   +I   ++ M   +R
Sbjct: 457 VIEKVYQANARMISVVDELMETLLR 481


>gi|126176158|ref|YP_001052307.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS155]
 gi|304412510|ref|ZP_07394116.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS183]
 gi|307307169|ref|ZP_07586907.1| flagellar basal-body rod protein FlgC [Shewanella baltica BA175]
 gi|125999363|gb|ABN63438.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS155]
 gi|304349152|gb|EFM13564.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS183]
 gi|306910408|gb|EFN40839.1| flagellar basal-body rod protein FlgC [Shewanella baltica BA175]
          Length = 138

 Score = 46.0 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 22/44 (50%)

Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +G++  SN N++ EM  M+  ++ F +   +++         ++
Sbjct: 91  QGYVAYSNVNTIEEMADMMAASRSFETSVEIMNRARSMQQGLLQ 134



 Score = 36.8 bits (83), Expect = 2.5,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 6/52 (11%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDI 52
          I  A   A   RL+TVA N++N  T        +R +K  F+ +  + +   
Sbjct: 9  IAGAGMNAQTIRLNTVASNLANAGTAAENPESAYRALKPVFATIYDSTQQGA 60


>gi|157693942|ref|YP_001488404.1| flagellar hook-associated protein FlgK [Bacillus pumilus SAFR-032]
 gi|157682700|gb|ABV63844.1| flagellar hook-associated protein 1 [Bacillus pumilus SAFR-032]
          Length = 506

 Score = 46.0 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 7/42 (16%), Positives = 17/42 (40%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            S  +   EM  MI     +N+   ++   ++ + + I  + 
Sbjct: 461 TSAVSIDEEMTNMIQFQHAYNAAARVVTLQDEILDKVINGMG 502



 Score = 42.5 bits (98), Expect = 0.044,   Method: Composition-based stats.
 Identities = 15/107 (14%), Positives = 26/107 (24%), Gaps = 9/107 (8%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE---------VVGAIKNDIDQ 54
                     A    L   ++N+SN +T G+   +V F             G     +  
Sbjct: 7   GLETAKRGITAQRAGLYVTSNNVSNANTDGYSRQRVTFKAENPYPVISVYDGKTYGQMGT 66

Query: 55  KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101
            +      +   S     F      L +        +        LT
Sbjct: 67  GVQVGTVERIRDSFLDLQFRDHNNNLSYYSAKSDALSQMEGVMNDLT 113


>gi|114765223|ref|ZP_01444355.1| flagellar basal-body rod protein C [Pelagibaca bermudensis
          HTCC2601]
 gi|114542358|gb|EAU45386.1| flagellar basal-body rod protein C [Roseovarius sp. HTCC2601]
          Length = 136

 Score = 46.0 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 26/79 (32%), Gaps = 7/79 (8%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQKIS 57
           ++  +   A  +RL  V++N++N  + G       +R   + F E+V         ++ 
Sbjct: 8  LSVAASGMRAQGERLKVVSENVANASSTGNSNGEDPYRRKIISFQEMVDRDSGASMVEVD 67

Query: 58 FVASGKEYLSKEVGSFIST 76
           V                 
Sbjct: 68 GVRRDDADFQLNYDPSHPA 86



 Score = 43.3 bits (100), Expect = 0.028,   Method: Composition-based stats.
 Identities = 14/119 (11%), Positives = 35/119 (29%)

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                      +     +        GE   + K+I+   +   D     V  +      
Sbjct: 14  GMRAQGERLKVVSENVANASSTGNSNGEDPYRRKIISFQEMVDRDSGASMVEVDGVRRDD 73

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
                  +       + GF++ SN N++ EM  M   ++ + +   + +       + +
Sbjct: 74  ADFQLNYDPSHPAADEDGFVKVSNVNTILEMSNMREASRSYQANLNMFETGRSMRSQLL 132


>gi|85058017|ref|YP_453719.1| flagellar hook-associated protein 1 FlgK [Sodalis glossinidius
          str. 'morsitans']
 gi|84778537|dbj|BAE73314.1| flagellar hook-associated protein 1 FlgK [Sodalis glossinidius
          str. 'morsitans']
          Length = 556

 Score = 46.0 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 7/37 (18%), Positives = 15/37 (40%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTI 37
          M   + I  +     +Q LS + +N++N     +   
Sbjct: 1  MLNLYYIASSGLQTGQQALSVIGNNLANATNPYYSRQ 37


>gi|160903120|ref|YP_001568701.1| flagellar basal-body rod protein FlgB [Petrotoga mobilis SJ95]
 gi|160360764|gb|ABX32378.1| flagellar basal-body rod protein FlgB [Petrotoga mobilis SJ95]
          Length = 133

 Score = 46.0 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/70 (17%), Positives = 27/70 (38%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
            AL  R + ++ N++N +T G++   V F   +    ++       V   +   +    
Sbjct: 14 MDALSLRQNVISQNIANYETPGYKRKYVDFENELQKALSEDSALTLKVNRDQHINNTLSL 73

Query: 72 SFISTGTELD 81
            I    ++D
Sbjct: 74 GKIQPNIQID 83


>gi|84502401|ref|ZP_01000537.1| flagellar basal body rod protein [Oceanicola batsensis HTCC2597]
 gi|84389213|gb|EAQ02010.1| flagellar basal body rod protein [Oceanicola batsensis HTCC2597]
          Length = 136

 Score = 46.0 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 21/43 (48%)

Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           +GF++ SN + + EM  M   ++ + +   L +   +   + I
Sbjct: 90  QGFIKVSNVSPIMEMANMREASRSYEANMNLFEAARRMRSQVI 132



 Score = 43.3 bits (100), Expect = 0.026,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 25/60 (41%), Gaps = 10/60 (16%)

Query: 1  MQ---TSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKN 50
          M    +   I  +  LA  +RL  V++N++N  +         +R   + F E++ +   
Sbjct: 1  MDPLKSILTISASGMLAQGERLKVVSENVANASSTAMSPGEDPYRRKTITFEELLDSESG 60


>gi|312962293|ref|ZP_07776784.1| flagellar basal-body rod protein FlgG [Pseudomonas fluorescens WH6]
 gi|311283220|gb|EFQ61810.1| flagellar basal-body rod protein FlgG [Pseudomonas fluorescens WH6]
          Length = 38

 Score = 46.0 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 6/35 (17%), Positives = 16/35 (45%)

Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           + EM  MI   + +   + +I   ++ +    +N+
Sbjct: 4   VEEMVNMITTQRAYEMNSKVISTADQMLSFVTQNL 38


>gi|170748110|ref|YP_001754370.1| flagellar basal body rod protein FlgB [Methylobacterium
          radiotolerans JCM 2831]
 gi|170654632|gb|ACB23687.1| flagellar basal body rod protein [Methylobacterium radiotolerans
          JCM 2831]
          Length = 128

 Score = 46.0 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 5  FNIGLAAQLALEQ-RLSTVADNMSNTDTVGFR-TIKVKFSEVV 45
               + QL     R + ++ N++N +T G+R      F +V+
Sbjct: 6  LFNLASRQLQHLTARQAVISGNIANANTPGYRARDLTPFRDVL 48


>gi|220925380|ref|YP_002500682.1| flagellar basal body rod protein FlgC [Methylobacterium nodulans
           ORS 2060]
 gi|219949987|gb|ACL60379.1| flagellar basal-body rod protein FlgC [Methylobacterium nodulans
           ORS 2060]
          Length = 136

 Score = 46.0 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 8/53 (15%), Positives = 17/53 (32%)

Query: 186 LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            E  +      G +   N N + E   M    + + +   +I    + +   I
Sbjct: 79  HEPGNPAADANGEVRLPNVNLLVETVDMREAQRSYEANLNMITAARRMISRTI 131



 Score = 42.5 bits (98), Expect = 0.051,   Method: Composition-based stats.
 Identities = 6/29 (20%), Positives = 14/29 (48%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTD 30
            +  I  +   A   R+  +++N++N D
Sbjct: 4  MKAIGIAASGLRAQSGRMRVISENIANAD 32


>gi|332558510|ref|ZP_08412832.1| FlgC [Rhodobacter sphaeroides WS8N]
 gi|332276222|gb|EGJ21537.1| FlgC [Rhodobacter sphaeroides WS8N]
          Length = 138

 Score = 46.0 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 30/87 (34%), Gaps = 6/87 (6%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDT------VGFRTIKVKFSEVVGAIKNDIDQK 55
           + FN+G  A  A   R++TVA N++N  T        FR ++  F              
Sbjct: 5  DSVFNVGARALSAQMVRMNTVASNLANAGTVSDRAETAFRPLRPVFETSYADAVGRTGLS 64

Query: 56 ISFVASGKEYLSKEVGSFISTGTELDF 82
           + VA       +    +     + D 
Sbjct: 65 TTDVAGVVSLDREPARVYRPDHPQADP 91



 Score = 35.2 bits (79), Expect = 7.9,   Method: Composition-based stats.
 Identities = 4/36 (11%), Positives = 13/36 (36%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +   EM +M+  ++++ +    +      M     
Sbjct: 100 VSVDEEMVEMMEASRQYQNTLEAVSTLRSLMARTAS 135


>gi|325567533|ref|ZP_08144200.1| flagellar basal-body rod protein FlgC [Enterococcus casseliflavus
           ATCC 12755]
 gi|325158966|gb|EGC71112.1| flagellar basal-body rod protein FlgC [Enterococcus casseliflavus
           ATCC 12755]
          Length = 138

 Score = 46.0 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 21/42 (50%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++  SN +   EM  M+   + + +  +  + N+  + +A+
Sbjct: 92  GYVGQSNVDIADEMVAMLQAVRTYEANVSASEMNKTILKKAL 133



 Score = 40.6 bits (93), Expect = 0.21,   Method: Composition-based stats.
 Identities = 9/58 (15%), Positives = 21/58 (36%), Gaps = 6/58 (10%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQ 54
              I  +       +L T++ N++N +T        ++   + FSE +   +     
Sbjct: 5  NGLTINASGLALERLKLDTISSNIANVNTNQTQTTAAYQKKSILFSENLKNSREGTPA 62


>gi|224534287|ref|ZP_03674865.1| flagellar hook-associated protein FlgK [Borrelia spielmanii A14S]
 gi|224514389|gb|EEF84705.1| flagellar hook-associated protein FlgK [Borrelia spielmanii A14S]
          Length = 627

 Score = 46.0 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 16/41 (39%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E+  MI   Q F + +  I  + + +   I  + 
Sbjct: 586 SGVNKDEELANMIEFQQAFIAASKFITVSAELIDTVINKMG 626



 Score = 35.2 bits (79), Expect = 7.2,   Method: Composition-based stats.
 Identities = 12/83 (14%), Positives = 28/83 (33%), Gaps = 3/83 (3%)

Query: 1  MQT---SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS 57
          M +      IG  +  A +  ++TV  N+SN    G+   +V  +         +++   
Sbjct: 1  MDSTFSGIEIGKRSLFAHKDAMNTVGHNLSNATKPGYSRQRVTMTTTTPLYAPQLNRAKK 60

Query: 58 FVASGKEYLSKEVGSFISTGTEL 80
              G+  + + +          
Sbjct: 61 QGQLGQGIMVQSIDRVKDELLNT 83


>gi|83859394|ref|ZP_00952915.1| flagellar hook-associated protein FlaN, putative [Oceanicaulis
          alexandrii HTCC2633]
 gi|83852841|gb|EAP90694.1| flagellar hook-associated protein FlaN, putative [Oceanicaulis
          alexandrii HTCC2633]
          Length = 708

 Score = 46.0 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 8/33 (24%), Positives = 17/33 (51%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGF 34
           +     L+   A +  L T ++N++N +T G+
Sbjct: 4  NSVIGNALSGLRASQLGLRTASNNVANVNTPGY 36


>gi|323698500|ref|ZP_08110412.1| flagellar basal-body rod protein FlgC [Desulfovibrio sp. ND132]
 gi|323458432|gb|EGB14297.1| flagellar basal-body rod protein FlgC [Desulfovibrio desulfuricans
           ND132]
          Length = 145

 Score = 46.0 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 21/48 (43%), Gaps = 1/48 (2%)

Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           +G++   + N + EM  M+   + + +    +   +    +A+  I S
Sbjct: 99  QGYVFYPDINVVEEMANMMQAMRGYEANVQTVQAVKNMFQKAL-TIGS 145



 Score = 38.3 bits (87), Expect = 0.96,   Method: Composition-based stats.
 Identities = 8/31 (25%), Positives = 16/31 (51%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32
           T+ +I  +   A   +L+ ++ NM+N  T 
Sbjct: 4  MTALDISASGLTAQRAQLNVISMNMANMRTT 34


>gi|297618069|ref|YP_003703228.1| flagellar hook-associated protein FlgK [Syntrophothermus
          lipocalidus DSM 12680]
 gi|297145906|gb|ADI02663.1| flagellar hook-associated protein FlgK [Syntrophothermus
          lipocalidus DSM 12680]
          Length = 618

 Score = 46.0 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 15/41 (36%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKF 41
          M     IG  A +  +  L     N++N +T G+       
Sbjct: 4  MFLGLEIGRRAIMTQQTALDVTGHNVANANTEGYSRQVAVM 44



 Score = 43.7 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 7/42 (16%), Positives = 16/42 (38%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            S  +   EM  MI     +N+    I   ++++   +  + 
Sbjct: 573 TSGVSLDEEMVNMIKFQHAYNAAARYITVIDEAVDVIVNRMG 614


>gi|196247642|ref|ZP_03146344.1| flagellar basal-body rod protein FlgB [Geobacillus sp. G11MC16]
 gi|196212426|gb|EDY07183.1| flagellar basal-body rod protein FlgB [Geobacillus sp. G11MC16]
          Length = 129

 Score = 46.0 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 17/38 (44%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI 48
                 R   +ADN++N DT G++   V+F   +   
Sbjct: 14 GLRYASLRQQAIADNIANVDTPGYKAKDVRFQAELNRA 51


>gi|92114092|ref|YP_574020.1| flagellar hook-associated protein [Chromohalobacter salexigens
          DSM 3043]
 gi|91797182|gb|ABE59321.1| Flagellar hook-associated protein [Chromohalobacter salexigens
          DSM 3043]
          Length = 539

 Score = 46.0 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 25/69 (36%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           + F+IGL+   A +  LST ++N+SN  T G+        E            +  V  
Sbjct: 1  MSIFSIGLSGLSAAQSALSTTSNNLSNVYTEGYNRQLTILGESYSNGSTGTGVSVDEVQR 60

Query: 62 GKEYLSKEV 70
                 E 
Sbjct: 61 QFNSYVTEQ 69



 Score = 36.0 bits (81), Expect = 4.7,   Method: Composition-based stats.
 Identities = 7/71 (9%), Positives = 22/71 (30%)

Query: 169 FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228
            V    +  +        +      ++     +S  N   E   ++   Q + +   +ID
Sbjct: 467 LVNEVGNTTNITQVNLDAQSGLTEQLREYQQSESGVNLDEEYANLVRYQQYYQANARVID 526

Query: 229 ENEKSMLEAIR 239
              + +   ++
Sbjct: 527 VGSQVLDSVLQ 537


>gi|85710161|ref|ZP_01041226.1| flagellar proximal rod protein [Erythrobacter sp. NAP1]
 gi|85688871|gb|EAQ28875.1| flagellar proximal rod protein [Erythrobacter sp. NAP1]
          Length = 117

 Score = 46.0 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 20/38 (52%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA 47
          AA     QR+  +A N++N  T GF+   + F+  + A
Sbjct: 11 AALELRSQRMGVIASNIANAATPGFKARDMDFNAALNA 48


>gi|47566127|ref|ZP_00237165.1| flagellar basal-body rod protein flgC [Bacillus cereus G9241]
 gi|206974761|ref|ZP_03235676.1| flagellar basal-body rod protein FlgC [Bacillus cereus H3081.97]
 gi|217959228|ref|YP_002337776.1| flagellar basal body rod protein FlgC [Bacillus cereus AH187]
 gi|229138444|ref|ZP_04267033.1| Flagellar basal-body rod protein FlgC [Bacillus cereus BDRD-ST26]
 gi|47557044|gb|EAL15374.1| flagellar basal-body rod protein flgC [Bacillus cereus G9241]
 gi|206746780|gb|EDZ58172.1| flagellar basal-body rod protein FlgC [Bacillus cereus H3081.97]
 gi|217065314|gb|ACJ79564.1| flagellar basal-body rod protein FlgC [Bacillus cereus AH187]
 gi|228644981|gb|EEL01224.1| Flagellar basal-body rod protein FlgC [Bacillus cereus BDRD-ST26]
          Length = 137

 Score = 46.0 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 22/40 (55%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           G++   N +   EM  ++   + + + T++++ N+K + +
Sbjct: 91  GYVRYPNVDVTAEMTNVMVAQKMYEANTSVLNANKKMLDK 130



 Score = 42.2 bits (97), Expect = 0.071,   Method: Composition-based stats.
 Identities = 5/33 (15%), Positives = 13/33 (39%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG 33
          M  + N   +      + +   ++N+ N +T  
Sbjct: 1  MFQAINASGSGLTTARKWMEVTSNNIVNANTTA 33


>gi|313683371|ref|YP_004061109.1| flagellar basal-body rod protein flgc [Sulfuricurvum kujiense DSM
           16994]
 gi|313156231|gb|ADR34909.1| flagellar basal-body rod protein FlgC [Sulfuricurvum kujiense DSM
           16994]
          Length = 164

 Score = 46.0 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 8/45 (17%), Positives = 19/45 (42%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           G++   N N + EM  ++  T+ + +     +  +     AI  +
Sbjct: 118 GYVAYPNINPVVEMADLVEATRSYQANVAAFESAKNMAGSAISIL 162



 Score = 39.9 bits (91), Expect = 0.31,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 6/49 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44
            SF+I      A   R++T++ N++N  T     G  +R  +V F  +
Sbjct: 4  LNSFDISGYGLSAQRVRVNTISANIANAQTTRTNEGGPYRRQEVIFKAI 52


>gi|294339846|emb|CAZ88209.1| putative Flagellar basal-body rod protein flgB (Putative proximal
          rod protein) [Thiomonas sp. 3As]
          Length = 135

 Score = 46.0 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/74 (16%), Positives = 25/74 (33%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69
           A     QR   ++ N++N +T G++ + V FS    A  +        + +        
Sbjct: 14 TALNLRAQRQQLLSANIANANTPGYKAVDVDFSAAFKAALSGQQTGGLPLKTENARQLAG 73

Query: 70 VGSFISTGTELDFA 83
            +   +      A
Sbjct: 74 NVAPAGSNFIAYQA 87


>gi|167614835|ref|ZP_02383470.1| flagellar basal-body rod protein FlgC [Burkholderia thailandensis
           Bt4]
          Length = 125

 Score = 46.0 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 19/42 (45%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G +   N N + EM  M+  ++ +++   ++       LE +
Sbjct: 80  GNVLYPNVNPVEEMTDMLSASRAYSTNVEVLGRVNSMQLELL 121



 Score = 36.4 bits (82), Expect = 4.0,   Method: Composition-based stats.
 Identities = 17/96 (17%), Positives = 33/96 (34%), Gaps = 11/96 (11%)

Query: 12 QLALEQRLSTVADNMSNT--------DTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
            A   RL+T+A N++N          T  +R  K  F+ +         +  +      
Sbjct: 1  MSAQTVRLNTIASNLANADAASGAEDST--YRARKPVFASIFQLDAQGEPRGAAVQVLDV 58

Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
             ++ +      G  L  A EG+  +   +P   +
Sbjct: 59 VKSTEPLRKVHQPGHPLADA-EGNVLYPNVNPVEEM 93


>gi|242278629|ref|YP_002990758.1| flagellar basal body rod protein FlgB [Desulfovibrio salexigens
          DSM 2638]
 gi|242121523|gb|ACS79219.1| flagellar basal-body rod protein FlgB [Desulfovibrio salexigens
          DSM 2638]
          Length = 136

 Score = 46.0 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 30/63 (47%), Gaps = 1/63 (1%)

Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76
          QR + V+ N++N +T G++  +++F E +    N +D K     + K ++     +    
Sbjct: 21 QRQNLVSSNLANVNTPGYKEKRLEFEEDLQKAMN-LDAKGKMTRTSKMHIPTAFDANKFE 79

Query: 77 GTE 79
          G  
Sbjct: 80 GDT 82


>gi|157371201|ref|YP_001479190.1| flagellar hook-associated protein FlgK [Serratia proteamaculans
           568]
 gi|157322965|gb|ABV42062.1| flagellar hook-associated protein FlgK [Serratia proteamaculans
           568]
          Length = 548

 Score = 46.0 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/134 (10%), Positives = 39/134 (29%), Gaps = 1/134 (0%)

Query: 1   MQTSF-NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFV 59
           M  S  N  ++   A +  LSTV++N+SN +  G+       ++  G    +        
Sbjct: 1   MSNSLINTAMSGLNAAQVALSTVSNNISNYNVAGYNRQTAILAQNGGMSTMNGFIGNGVT 60

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119
            +       +  +    G +     +   +  +     ++ ++             +   
Sbjct: 61  VTSVNREYNQFITNQLRGAQSQAGAQNAYFEKISQIDNLLASKTNTLSTNMQDFFSNLEN 120

Query: 120 KYPVLDMASVPIQI 133
                   +    +
Sbjct: 121 LVSNAGDDAARQTV 134


>gi|332296509|ref|YP_004438432.1| flagellar hook-associated protein FlgK [Thermodesulfobium narugense
           DSM 14796]
 gi|332179612|gb|AEE15301.1| flagellar hook-associated protein FlgK [Thermodesulfobium narugense
           DSM 14796]
          Length = 936

 Score = 46.0 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 16/139 (11%), Positives = 38/139 (27%), Gaps = 8/139 (5%)

Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
           G   +   G  V   G+      ++    I            G  +  G         S+
Sbjct: 806 GSSGMPLYGITVGTDGESLTFVTSNPNQSIRVL--GEYSSALGFKNYDGSFTVANAYISM 863

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223
             + G   ++ +    N         +     +G       +   EM  +I     +++ 
Sbjct: 864 TSNIGTQGQQATTNYTNQSNVVTLLQNQQQSVQG------VSMDEEMTNLIQYQTAYSAS 917

Query: 224 TTLIDENEKSMLEAIRNIA 242
             +I+     + + I +  
Sbjct: 918 ARVINAINSMLDKLINSTG 936



 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 7/82 (8%), Positives = 25/82 (30%), Gaps = 3/82 (3%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKF---SEVVGAIKNDIDQKISFVA 60
             I  +A  + +  +     N++N +T  +      F   + +      ++   ++   
Sbjct: 9  GLQIAQSALASNQLAMDVTGHNVANANTASYSRQSPVFVQNTPLSYPTSGEVGTGVNIST 68

Query: 61 SGKEYLSKEVGSFISTGTELDF 82
            +   S       +  +   +
Sbjct: 69 IKRYRDSFIDAQLRNASSLQSY 90


>gi|323341389|ref|ZP_08081633.1| flagellar basal-body rod protein FlgB [Lactobacillus ruminis ATCC
          25644]
 gi|323091266|gb|EFZ33894.1| flagellar basal-body rod protein FlgB [Lactobacillus ruminis ATCC
          25644]
          Length = 121

 Score = 46.0 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 7/44 (15%), Positives = 21/44 (47%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
           A    + R   +++N++N +T  ++  +V F   +    + ++
Sbjct: 9  TAMDVSQTRSELISNNIANVNTPNYKAKRVVFESQLSQAMDSLN 52


>gi|225569981|ref|ZP_03779006.1| hypothetical protein CLOHYLEM_06076 [Clostridium hylemonae DSM
          15053]
 gi|225161451|gb|EEG74070.1| hypothetical protein CLOHYLEM_06076 [Clostridium hylemonae DSM
          15053]
          Length = 136

 Score = 46.0 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 9/67 (13%), Positives = 20/67 (29%), Gaps = 5/67 (7%)

Query: 2  QTSFNIGLAAQLALE-----QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56
            S        +         +    ++N++N DT G+++  V F E          +  
Sbjct: 9  INSMYGNTIGMMEKSLDFLWTKQGVTSNNIANVDTPGYKSKYVTFEETFQRRLAAATKAG 68

Query: 57 SFVASGK 63
                +
Sbjct: 69 DGRQVRQ 75


>gi|37525847|ref|NP_929191.1| flagellar hook-associated protein FlgK [Photorhabdus luminescens
          subsp. laumondii TTO1]
 gi|36785276|emb|CAE14217.1| Flagellar hook-associated protein 1 (HAP1) [Photorhabdus
          luminescens subsp. laumondii TTO1]
 gi|37681983|gb|AAQ97871.1| FlgK [Photorhabdus luminescens]
          Length = 549

 Score = 46.0 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 21/41 (51%), Gaps = 1/41 (2%)

Query: 1  MQTSF-NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
          M +S  NI ++   A +  L TV++N++N+   G+      
Sbjct: 1  MSSSLINIAMSGLQAAQIALGTVSNNLANSKVPGYNRQSTV 41


>gi|317121812|ref|YP_004101815.1| flagellar basal-body rod protein FlgB [Thermaerobacter
          marianensis DSM 12885]
 gi|315591792|gb|ADU51088.1| flagellar basal-body rod protein FlgB [Thermaerobacter
          marianensis DSM 12885]
          Length = 156

 Score = 45.6 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 18/37 (48%)

Query: 9  LAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV 45
           A    L  R   +A N++N DT G++   V F+  +
Sbjct: 10 AAGLEVLALRQRLLAQNVANADTPGYKRYDVDFARAL 46


>gi|309388814|gb|ADO76694.1| flagellar basal-body rod protein FlgB [Halanaerobium praevalens
          DSM 2228]
          Length = 128

 Score = 45.6 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 8/35 (22%), Positives = 17/35 (48%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV 45
          A     +R   +A+N++N  T G++   + F   +
Sbjct: 10 ALAGSARRGELIANNLANVSTPGYKRQDIDFKSAL 44


>gi|219684621|ref|ZP_03539564.1| flagellar basal-body rod protein FlgB [Borrelia garinii PBr]
 gi|219671983|gb|EED29037.1| flagellar basal-body rod protein FlgB [Borrelia garinii PBr]
          Length = 135

 Score = 45.6 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 21/44 (47%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK 55
             L  R S ++DN++N DT  F+  K+ F   +    ++  + 
Sbjct: 15 LDVLSLRQSVISDNIANVDTPNFKRSKISFESELEKAFSNKGKN 58


>gi|94987301|ref|YP_595234.1| flagellar basal body rod protein [Lawsonia intracellularis
           PHE/MN1-00]
 gi|94731550|emb|CAJ54913.1| Flagellar basal body rod protein [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 146

 Score = 45.6 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 21/42 (50%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G +   + N + EM  ++  ++ + + +T ID  +   + A+
Sbjct: 100 GMVSYPDINVVEEMANLMTASRNYEANSTTIDTVKNMYMRAL 141


>gi|218887374|ref|YP_002436695.1| flagellar basal-body rod protein FlgC [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218758328|gb|ACL09227.1| flagellar basal-body rod protein FlgC [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 145

 Score = 45.6 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 21/44 (47%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           + GF+   + N + EM  ++   + + +  T ID  +    +A+
Sbjct: 98  QDGFVAYPDINVVEEMASLMTAQRGYEANVTTIDTVKAMYTKAL 141



 Score = 40.6 bits (93), Expect = 0.19,   Method: Composition-based stats.
 Identities = 8/31 (25%), Positives = 17/31 (54%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32
           T+ +IG +A  A    ++ ++ N++N  T 
Sbjct: 4  MTAIDIGASALNAERTNMNIISMNLANVKTT 34


>gi|42780837|ref|NP_978084.1| flagellar basal body rod protein FlgC [Bacillus cereus ATCC 10987]
 gi|222095368|ref|YP_002529428.1| flagellar basal body rod protein flgc [Bacillus cereus Q1]
 gi|229195957|ref|ZP_04322710.1| Flagellar basal-body rod protein FlgC [Bacillus cereus m1293]
 gi|42736757|gb|AAS40692.1| flagellar basal-body rod protein FlgC [Bacillus cereus ATCC 10987]
 gi|221239426|gb|ACM12136.1| flagellar basal-body rod protein FlgC [Bacillus cereus Q1]
 gi|228587516|gb|EEK45581.1| Flagellar basal-body rod protein FlgC [Bacillus cereus m1293]
          Length = 137

 Score = 45.6 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 22/40 (55%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           G++   N +   EM  ++   + + + T++++ N+K + +
Sbjct: 91  GYVRYPNVDVTAEMTNVMVAQKMYEANTSVLNANKKMLDK 130



 Score = 42.2 bits (97), Expect = 0.073,   Method: Composition-based stats.
 Identities = 5/33 (15%), Positives = 13/33 (39%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG 33
          M  + N   +      + +   ++N+ N +T  
Sbjct: 1  MFQAINASGSGLTTARKWMEVTSNNIVNANTTA 33


>gi|229029424|ref|ZP_04185507.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH1271]
 gi|228731883|gb|EEL82782.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH1271]
          Length = 137

 Score = 45.6 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 22/40 (55%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           G++   N +   EM  ++   + + + T++++ N+K + +
Sbjct: 91  GYVRYPNVDVTAEMTNVMVAQKMYEANTSVLNANKKMLDK 130



 Score = 41.8 bits (96), Expect = 0.074,   Method: Composition-based stats.
 Identities = 5/33 (15%), Positives = 13/33 (39%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG 33
          M  + N   +      + +   ++N+ N +T  
Sbjct: 1  MFQAINASGSGLTTARKWMEVTSNNIVNANTTA 33


>gi|187778746|ref|ZP_02995219.1| hypothetical protein CLOSPO_02341 [Clostridium sporogenes ATCC
           15579]
 gi|187772371|gb|EDU36173.1| hypothetical protein CLOSPO_02341 [Clostridium sporogenes ATCC
           15579]
          Length = 153

 Score = 45.6 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 21/42 (50%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N N + EM  M+   + + +  T+++  +    +A+
Sbjct: 108 GYVSMPNVNVLNEMADMMASVRTYEASVTVMNAEKSMFGKAL 149



 Score = 43.7 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 20/50 (40%), Gaps = 9/50 (18%)

Query: 1  MQTSFNI---GLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKF 41
          M  +F+      +   A   R+ T+A N++N  T     G  ++     F
Sbjct: 10 MIKAFDTMRISASGLSAERLRMDTIASNIANATTTRTENGGPYKRKIAVF 59


>gi|78355403|ref|YP_386852.1| flagellar basal body rod protein FlgB [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78217808|gb|ABB37157.1| flagellar basal-body rod protein FlgB [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
          Length = 155

 Score = 45.6 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 8/69 (11%), Positives = 26/69 (37%), Gaps = 1/69 (1%)

Query: 12  QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
                +R + +  NM+N  T G++  ++ F + + A  + +  +     + ++++     
Sbjct: 35  MDMQLKRQNVIMSNMANVRTPGYKARELDFEKDLQAALS-LGTEGKIARTHEKHVPATFD 93

Query: 72  SFISTGTEL 80
                    
Sbjct: 94  PETFGPEWT 102


>gi|270262395|ref|ZP_06190666.1| flagellar hook-associated protein FlgK [Serratia odorifera 4Rx13]
 gi|270043079|gb|EFA16172.1| flagellar hook-associated protein FlgK [Serratia odorifera 4Rx13]
          Length = 548

 Score = 45.6 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/134 (10%), Positives = 38/134 (28%), Gaps = 1/134 (0%)

Query: 1   MQTSF-NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFV 59
           M  S  N  ++   A +  LSTV++N+SN +  G+       ++  G             
Sbjct: 1   MSNSLINTAMSGLNAAQVALSTVSNNISNYNVAGYNRQTAILAQNGGMSTMSGFIGNGVT 60

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119
            +       +  +    G +     +   +  +     ++ ++             +   
Sbjct: 61  VTSVNREYNQFITSQLRGAQSQAGAQNAYFEKISQIDNLLASKTNTLSTNMQDFFSNLQN 120

Query: 120 KYPVLDMASVPIQI 133
                   +    +
Sbjct: 121 LVSNAGDDAARQTV 134


>gi|320015457|gb|ADV99028.1| flagellar hook-associated protein 1 [Yersinia pestis biovar
          Medievalis str. Harbin 35]
          Length = 554

 Score = 45.6 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 1  MQTSF-NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
          M  S  N  ++   A +  LSTV++N++N    G+      F++
Sbjct: 1  MSNSLMNTAMSGLNAAQYALSTVSNNITNFQVAGYNRQNTVFAQ 44


>gi|170748652|ref|YP_001754912.1| flagellar basal body rod protein FlgC [Methylobacterium
           radiotolerans JCM 2831]
 gi|170655174|gb|ACB24229.1| flagellar basal-body rod protein FlgC [Methylobacterium
           radiotolerans JCM 2831]
          Length = 135

 Score = 45.6 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/93 (12%), Positives = 30/93 (32%)

Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNAN 205
           G    + K+         +     V        P+   T  E  +     +G ++  N N
Sbjct: 39  GAQPYRRKIPTFTSHLDDETGARLVEAGRVKRDPSAFRTKYEPGNPAADAQGVVQMPNVN 98

Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           ++ E   +    + + +   +I    K + + +
Sbjct: 99  ALIENMDLREAQRSYEANLNMISATRKMLAQTL 131



 Score = 37.9 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 8/28 (28%), Positives = 14/28 (50%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTD 30
           S  +  A   A   R+  +A+N++N D
Sbjct: 5  KSLAVAAAGLKAQSGRMRIIAENIANAD 32


>gi|167645332|ref|YP_001682995.1| flagellar basal body rod protein FlgC [Caulobacter sp. K31]
 gi|167347762|gb|ABZ70497.1| flagellar basal-body rod protein FlgC [Caulobacter sp. K31]
          Length = 140

 Score = 45.6 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 11/102 (10%), Positives = 27/102 (26%), Gaps = 7/102 (6%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQKIS 57
             I  +A  A + R+  +A+N++N ++         +R     F         +      
Sbjct: 12  MAIAASALKAQQGRMRVIAENIANANSTARVAGGDPYRRQVPVFKPTTLKGGGEGVVMAK 71

Query: 58  FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
                K++ +       +   +    L               
Sbjct: 72  VDPDMKDFGTAYDPGNPAADAKGYVKLPNVDTLVEALDMKEA 113



 Score = 42.2 bits (97), Expect = 0.065,   Method: Composition-based stats.
 Identities = 6/60 (10%), Positives = 23/60 (38%)

Query: 183 PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            T  +  +     +G+++  N +++ E   M    + + +   +I+ +       +  + 
Sbjct: 80  GTAYDPGNPAADAKGYVKLPNVDTLVEALDMKEAQRAYEANMNVIETSRAMESRTLDILR 139


>gi|26991080|ref|NP_746505.1| flagellar basal body rod protein FlgB [Pseudomonas putida KT2440]
 gi|24986115|gb|AAN69969.1|AE016635_5 flagellar basal-body rod protein FlgB [Pseudomonas putida KT2440]
          Length = 136

 Score = 45.6 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 21/51 (41%)

Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLS 67
          QR   +A+N++N DT  ++   + F+ V+ A  +       F         
Sbjct: 21 QRAEVLANNIANADTPNYKARDMDFASVLAAESDKQQSGGRFNLDRTNSRH 71


>gi|311992323|gb|ADQ26735.1| proximal rod protein [Aeromonas hydrophila]
          Length = 131

 Score = 45.6 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/98 (13%), Positives = 32/98 (32%)

Query: 12  QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
                +R   ++ N++N DT GF+   + FS+ +   +      ++  +     L  +  
Sbjct: 15  LSVRSKRAEVLSSNIANADTPGFKARDINFSQALEEAQQQQGFGLATTSEKHFALQMDAP 74

Query: 72  SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109
                   L           ++  R   L     ++ +
Sbjct: 75  GVTQYRNPLQPDTGDGNTVDVQQERSEFLRNSLEYQTS 112


>gi|251789174|ref|YP_003003895.1| flagellar hook-associated protein FlgK [Dickeya zeae Ech1591]
 gi|247537795|gb|ACT06416.1| flagellar hook-associated protein FlgK [Dickeya zeae Ech1591]
          Length = 640

 Score = 45.6 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 19/39 (48%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39
          M    N G++   A +  LSTV++N+SN    G+     
Sbjct: 1  MSNLINTGMSGLSAAQAALSTVSNNISNQAVAGYSRQNA 39


>gi|238758113|ref|ZP_04619293.1| Flagellar basal-body rod protein flgB [Yersinia aldovae ATCC
          35236]
 gi|238703651|gb|EEP96188.1| Flagellar basal-body rod protein flgB [Yersinia aldovae ATCC
          35236]
          Length = 137

 Score = 45.6 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 24/65 (36%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   ++ N++N DT GF+   + FS  +  +        + V+          
Sbjct: 15 ALNLRSQRQEVLSSNIANADTPGFQARDIDFSSQLKKVMEQGRVNGTGVSLSLTSARHIP 74

Query: 71 GSFIS 75
           S + 
Sbjct: 75 ASTVQ 79


>gi|22126384|ref|NP_669807.1| flagellar hook-associated protein FlgK [Yersinia pestis KIM 10]
 gi|45441403|ref|NP_992942.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
          Microtus str. 91001]
 gi|51596017|ref|YP_070208.1| flagellar hook-associated protein FlgK [Yersinia
          pseudotuberculosis IP 32953]
 gi|108807179|ref|YP_651095.1| flagellar hook-associated protein FlgK [Yersinia pestis Antiqua]
 gi|108812477|ref|YP_648244.1| flagellar hook-associated protein FlgK [Yersinia pestis Nepal516]
 gi|145598604|ref|YP_001162680.1| flagellar hook-associated protein FlgK [Yersinia pestis Pestoides
          F]
 gi|149366245|ref|ZP_01888280.1| flagellar hook-associated protein 1 [Yersinia pestis CA88-4125]
 gi|153948415|ref|YP_001401283.1| flagellar hook-associated protein FlgK [Yersinia
          pseudotuberculosis IP 31758]
 gi|162421752|ref|YP_001606478.1| flagellar hook-associated protein FlgK [Yersinia pestis Angola]
 gi|165925892|ref|ZP_02221724.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
          Orientalis str. F1991016]
 gi|165938764|ref|ZP_02227319.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
          Orientalis str. IP275]
 gi|166010871|ref|ZP_02231769.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
          Antiqua str. E1979001]
 gi|166210949|ref|ZP_02236984.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
          Antiqua str. B42003004]
 gi|167401050|ref|ZP_02306553.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
          Antiqua str. UG05-0454]
 gi|167420208|ref|ZP_02311961.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
          Orientalis str. MG05-1020]
 gi|167425863|ref|ZP_02317616.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
          Mediaevalis str. K1973002]
 gi|167467496|ref|ZP_02332200.1| flagellar hook-associated protein FlgK [Yersinia pestis FV-1]
 gi|186895120|ref|YP_001872232.1| flagellar hook-associated protein FlgK [Yersinia
          pseudotuberculosis PB1/+]
 gi|218928928|ref|YP_002346803.1| flagellar hook-associated protein FlgK [Yersinia pestis CO92]
 gi|229896251|ref|ZP_04511421.1| flagellar hook-associated protein 1 [Yersinia pestis Pestoides A]
 gi|229897188|ref|ZP_04512344.1| flagellar hook-associated protein 1 [Yersinia pestis biovar
          Orientalis str. PEXU2]
 gi|229897915|ref|ZP_04513066.1| flagellar hook-associated protein 1 [Yersinia pestis biovar
          Orientalis str. India 195]
 gi|229902854|ref|ZP_04517971.1| flagellar hook-associated protein 1 [Yersinia pestis Nepal516]
 gi|270486639|ref|ZP_06203713.1| flagellar hook-associated protein FlgK [Yersinia pestis KIM D27]
 gi|294504024|ref|YP_003568086.1| flagellar hook-associated protein [Yersinia pestis Z176003]
 gi|21959370|gb|AAM86058.1|AE013853_6 flagellar biosynthesis protein, hook-filament junction protein 1
          [Yersinia pestis KIM 10]
 gi|45436263|gb|AAS61819.1| flagellar hook-associated protein 1 [Yersinia pestis biovar
          Microtus str. 91001]
 gi|51589299|emb|CAH20920.1| flagellar hook-associated protein 1 [Yersinia pseudotuberculosis
          IP 32953]
 gi|108776125|gb|ABG18644.1| flagellar hook-associated protein 1 [Yersinia pestis Nepal516]
 gi|108779092|gb|ABG13150.1| flagellar hook-associated protein 1 [Yersinia pestis Antiqua]
 gi|115347539|emb|CAL20448.1| flagellar hook-associated protein 1 [Yersinia pestis CO92]
 gi|145210300|gb|ABP39707.1| flagellar hook-associated protein 1 [Yersinia pestis Pestoides F]
 gi|149292658|gb|EDM42732.1| flagellar hook-associated protein 1 [Yersinia pestis CA88-4125]
 gi|152959910|gb|ABS47371.1| flagellar hook-associated protein FlgK [Yersinia
          pseudotuberculosis IP 31758]
 gi|162354567|gb|ABX88515.1| flagellar hook-associated protein FlgK [Yersinia pestis Angola]
 gi|165913378|gb|EDR32000.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
          Orientalis str. IP275]
 gi|165922096|gb|EDR39273.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
          Orientalis str. F1991016]
 gi|165990215|gb|EDR42516.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
          Antiqua str. E1979001]
 gi|166208129|gb|EDR52609.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
          Antiqua str. B42003004]
 gi|166961903|gb|EDR57924.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
          Orientalis str. MG05-1020]
 gi|167049439|gb|EDR60847.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
          Antiqua str. UG05-0454]
 gi|167055262|gb|EDR65059.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
          Mediaevalis str. K1973002]
 gi|186698146|gb|ACC88775.1| flagellar hook-associated protein FlgK [Yersinia
          pseudotuberculosis PB1/+]
 gi|229680301|gb|EEO76400.1| flagellar hook-associated protein 1 [Yersinia pestis Nepal516]
 gi|229688956|gb|EEO81021.1| flagellar hook-associated protein 1 [Yersinia pestis biovar
          Orientalis str. India 195]
 gi|229693525|gb|EEO83574.1| flagellar hook-associated protein 1 [Yersinia pestis biovar
          Orientalis str. PEXU2]
 gi|229701174|gb|EEO89203.1| flagellar hook-associated protein 1 [Yersinia pestis Pestoides A]
 gi|262361790|gb|ACY58511.1| flagellar hook-associated protein [Yersinia pestis D106004]
 gi|262366074|gb|ACY62631.1| flagellar hook-associated protein [Yersinia pestis D182038]
 gi|270335143|gb|EFA45920.1| flagellar hook-associated protein FlgK [Yersinia pestis KIM D27]
 gi|294354483|gb|ADE64824.1| flagellar hook-associated protein [Yersinia pestis Z176003]
          Length = 554

 Score = 45.6 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 1  MQTSF-NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
          M  S  N  ++   A +  LSTV++N++N    G+      F++
Sbjct: 1  MSNSLMNTAMSGLNAAQYALSTVSNNITNFQVAGYNRQNTVFAQ 44


>gi|119715009|ref|YP_921974.1| flagellar basal-body rod protein FlgB [Nocardioides sp. JS614]
 gi|119535670|gb|ABL80287.1| flagellar basal-body rod protein FlgB [Nocardioides sp. JS614]
          Length = 118

 Score = 45.6 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 28/84 (33%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69
          AA   +  R    ADN++N DT G+R   V F   + A     D   +         +  
Sbjct: 15 AALDGIALRQRVTADNIANVDTPGYRASSVDFETSLRAAIAAGDPAGAAPGELLATDTPV 74

Query: 70 VGSFISTGTELDFALEGDAWFALE 93
            +  +     +      + F  +
Sbjct: 75 GANGNNVDLRKETLAAVQSQFQYQ 98


>gi|170024641|ref|YP_001721146.1| flagellar hook-associated protein FlgK [Yersinia
          pseudotuberculosis YPIII]
 gi|169751175|gb|ACA68693.1| flagellar hook-associated protein FlgK [Yersinia
          pseudotuberculosis YPIII]
          Length = 554

 Score = 45.6 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 1  MQTSF-NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
          M  S  N  ++   A +  LSTV++N++N    G+      F++
Sbjct: 1  MSNSLMNTAMSGLNAAQYALSTVSNNITNFQVAGYNRQNTVFAQ 44


>gi|167576660|ref|ZP_02369534.1| flagellar basal-body rod protein FlgC [Burkholderia thailandensis
           TXDOH]
          Length = 138

 Score = 45.6 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 19/42 (45%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G +   N N + EM  M+  ++ +++   ++       LE +
Sbjct: 93  GNVLYPNVNPVEEMTDMLSASRAYSTNVEVLGRVNSMQLELL 134



 Score = 39.1 bits (89), Expect = 0.55,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 28/82 (34%), Gaps = 10/82 (12%)

Query: 7  IGLAAQLALEQRLSTVADNMSNT--------DTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
          I  +A  A   RL+T+A N++N          T  +R  K  F+ +         +  + 
Sbjct: 9  IAGSAMSAQTVRLNTIASNLANADAASGAEDST--YRARKPVFASIFQLDAQGEPRGAAV 66

Query: 59 VASGKEYLSKEVGSFISTGTEL 80
                  ++ +      G  L
Sbjct: 67 QVLDVVKSTEPLRKVHQPGHPL 88


>gi|27380924|ref|NP_772453.1| flagellar basal body rod protein FlgC [Bradyrhizobium japonicum
           USDA 110]
 gi|27354090|dbj|BAC51078.1| flagellar basal-body rod protein [Bradyrhizobium japonicum USDA
           110]
          Length = 141

 Score = 45.6 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 20/47 (42%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           G ++  N NS+ EM  M    + + +   +I    + +   +  + S
Sbjct: 95  GNVKYPNVNSVVEMTDMRDAQRSYEANLNIISATRRMIQRTLDILKS 141



 Score = 42.2 bits (97), Expect = 0.060,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 22/55 (40%), Gaps = 7/55 (12%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTD----TVG---FRTIKVKFSEVVGAIKN 50
           S  I  +   A   R+  +++N++N D    T G   +R     FS  +    +
Sbjct: 10 RSMAIATSGLRAQAGRMRVISENIANADSTSQTAGGDPYRRKVPTFSSALDRTLD 64


>gi|152965613|ref|YP_001361397.1| flagellar basal-body rod protein FlgB [Kineococcus radiotolerans
          SRS30216]
 gi|151360130|gb|ABS03133.1| flagellar basal-body rod protein FlgB [Kineococcus radiotolerans
          SRS30216]
          Length = 116

 Score = 45.6 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 30/78 (38%), Gaps = 3/78 (3%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
          + +  L    A ++    +ADN+SN +T G+   KV F   + +     D   + V+   
Sbjct: 8  ALHTALNGLQARQRA---IADNISNINTPGYLANKVAFENELKSAVATGDAGAAAVSGIA 64

Query: 64 EYLSKEVGSFISTGTELD 81
             S E          LD
Sbjct: 65 TQKSLEPTREDGNNVNLD 82


>gi|325288805|ref|YP_004264986.1| flagellar basal-body rod protein FlgB [Syntrophobotulus
          glycolicus DSM 8271]
 gi|324964206|gb|ADY54985.1| flagellar basal-body rod protein FlgB [Syntrophobotulus
          glycolicus DSM 8271]
          Length = 132

 Score = 45.6 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 22/62 (35%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
             NI       L  R   +ADN++N DT  F+   V F  V+     +       ++  
Sbjct: 8  RVLNILEGGLDGLSLRNKVLADNIANVDTPNFKKSDVNFEAVLQEAIGEDQALPMKMSLP 67

Query: 63 KE 64
            
Sbjct: 68 GH 69


>gi|297569162|ref|YP_003690506.1| flagellar basal-body rod protein FlgC [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296925077|gb|ADH85887.1| flagellar basal-body rod protein FlgC [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 144

 Score = 45.6 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 6/41 (14%), Positives = 17/41 (41%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
           G +   N N   +M  M++  + + +    ++  ++    A
Sbjct: 99  GIVRYPNVNVAEQMVDMMNARRSYEANVAALEAVKEMAARA 139



 Score = 39.5 bits (90), Expect = 0.45,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 30/91 (32%), Gaps = 8/91 (8%)

Query: 1  MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDI 52
          M   T+  I  +A  A   RL+  + N++N +T     G  +R   V F           
Sbjct: 1  MDILTAMKISGSALKAERSRLNVASMNLANANTTRTMEGGPYRAKSVVFEAKPLDRDFGA 60

Query: 53 DQKISFVASGKEYLSKEVGSFISTGTELDFA 83
            + +     K  + + V          D A
Sbjct: 61 ALQGAASRLRKVEVVEVVEDQAPFREVYDPA 91


>gi|327480017|gb|AEA83327.1| flagellar basal body rod protein FlgB [Pseudomonas stutzeri DSM
          4166]
          Length = 134

 Score = 45.6 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 21/50 (42%)

Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65
           QR   +A+N++N DT  ++   + FS V+               + + +
Sbjct: 20 SQRAEVLANNIANADTPNYKARDLDFSSVLAEQSARSQGGFGVARTSERH 69


>gi|292492361|ref|YP_003527800.1| flagellar basal-body rod protein FlgC [Nitrosococcus halophilus
           Nc4]
 gi|291580956|gb|ADE15413.1| flagellar basal-body rod protein FlgC [Nitrosococcus halophilus
           Nc4]
          Length = 137

 Score = 45.6 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 23/43 (53%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N + EM  MI  ++ + +   + + +++ +L  ++
Sbjct: 92  GYIFHPNVNPIEEMANMISASRSYQNSVEVANTSKQLLLRTLQ 134



 Score = 36.8 bits (83), Expect = 2.4,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 29/87 (33%), Gaps = 6/87 (6%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56
             +I   A  A   RL+T A N++N D+V       +R     F+ V+     +     
Sbjct: 5  NIIDISGTAMSAQTLRLNTTASNLANADSVSSSVNQTYRARHPVFATVLNDFNQEEATGG 64

Query: 57 SFVASGKEYLSKEVGSFISTGTELDFA 83
            V    E  +     +       + A
Sbjct: 65 VQVLGVVESKAPLQQEYAPDHPMANEA 91


>gi|257095353|ref|YP_003168994.1| flagellar hook-associated protein FlgK [Candidatus Accumulibacter
          phosphatis clade IIA str. UW-1]
 gi|257047877|gb|ACV37065.1| flagellar hook-associated protein FlgK [Candidatus Accumulibacter
          phosphatis clade IIA str. UW-1]
          Length = 681

 Score = 45.6 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 15/49 (30%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
               L    A +  L T   N++N  T GF   +   +   G      
Sbjct: 5  MIGSSLTGINAAQLGLQTTEHNIANASTPGFSRQRTVQASNPGVQSGAG 53



 Score = 39.9 bits (91), Expect = 0.32,   Method: Composition-based stats.
 Identities = 23/162 (14%), Positives = 40/162 (24%), Gaps = 2/162 (1%)

Query: 82  FALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFN 141
            A    A     S   I L           G   + SG     D   +        +  N
Sbjct: 522 PAAVPVAGLDYRSGDSITLVDPAVVSTPPAGFSFTISGLPNNGDTFVISRNTGGTADSRN 581

Query: 142 VGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLED 201
               G++  +  +      Y  D     V +  S           +       +      
Sbjct: 582 ALALGQLQVQNTMSGKTATYQ-DAYAQLVSQTGSKTRQIQVSGEAQQALLEQAQASRDSL 640

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           S  N   E   +I   Q + +    +     ++ E I  + S
Sbjct: 641 SAVNLDEEAANLIRYQQAYQASAKALQIG-ANLFETILQLGS 681


>gi|218778840|ref|YP_002430158.1| flagellar hook-associated protein FlgK [Desulfatibacillum
          alkenivorans AK-01]
 gi|218760224|gb|ACL02690.1| Flagellar hook-associated protein FlgK [Desulfatibacillum
          alkenivorans AK-01]
          Length = 583

 Score = 45.6 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 9/50 (18%), Positives = 20/50 (40%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          ++ +I + A    +  +  V+ N++N +T G+    V     V       
Sbjct: 6  SALDIAVGAMATHQYGMDVVSHNVANVNTEGYTLQTVINKSKVPQASGGF 55



 Score = 43.3 bits (100), Expect = 0.032,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 28/78 (35%), Gaps = 6/78 (7%)

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLED-----SNANSMYEMGQMIHLTQKFN 221
           +GF     S +  ++           ++ +  LE      S  +   EM ++I L Q + 
Sbjct: 504 EGFYASMISALGSSLNSAERNREFAESMVQN-LETVRGSISGVSLDEEMTKLIELQQSYA 562

Query: 222 SITTLIDENEKSMLEAIR 239
           +   LI   ++     + 
Sbjct: 563 AAAKLITTMDEIFQTLMT 580


>gi|146278635|ref|YP_001168794.1| flagellar basal body rod protein FlgC [Rhodobacter sphaeroides
          ATCC 17025]
 gi|145556876|gb|ABP71489.1| protein of unknown function DUF1078 domain protein [Rhodobacter
          sphaeroides ATCC 17025]
          Length = 126

 Score = 45.6 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 23/69 (33%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
             +   RL  V++N++N DT GF    V F     +            +S ++      
Sbjct: 14 GMRSQALRLRHVSENIANVDTPGFHRKTVSFQSEPDSGLVSTGPVRLDRSSLQKMYDPGH 73

Query: 71 GSFISTGTE 79
               TG  
Sbjct: 74 PMADDTGYY 82



 Score = 45.2 bits (105), Expect = 0.009,   Method: Composition-based stats.
 Identities = 8/74 (10%), Positives = 23/74 (31%)

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223
           +   G V      +  +      +    +    G+ + SN N + E+       + + + 
Sbjct: 47  EPDSGLVSTGPVRLDRSSLQKMYDPGHPMADDTGYYDGSNVNLVVEIADAREAQRSYEAN 106

Query: 224 TTLIDENEKSMLEA 237
             + D+  +     
Sbjct: 107 LRMFDQARQMTQSL 120


>gi|2494517|sp|P70910|FLGB_BORHE RecName: Full=Flagellar basal-body rod protein flgB
 gi|1621620|gb|AAB51473.1| flagellar rod protein FlgB [Borrelia hermsii]
          Length = 135

 Score = 45.6 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 13/32 (40%), Positives = 17/32 (53%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
             L  R S +ADN++N DT  F+  KV F  
Sbjct: 15 LDVLSLRQSVIADNIANVDTPNFKRSKVTFEA 46


>gi|271500072|ref|YP_003333097.1| flagellar hook-associated protein FlgK [Dickeya dadantii Ech586]
 gi|270343627|gb|ACZ76392.1| flagellar hook-associated protein FlgK [Dickeya dadantii Ech586]
          Length = 638

 Score = 45.6 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 19/39 (48%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39
          M    N G++   A +  LSTV++N+SN    G+     
Sbjct: 1  MSNLINTGMSGLSAAQAALSTVSNNISNQAVAGYSRQNA 39


>gi|92116946|ref|YP_576675.1| flagellar basal body rod protein FlgC [Nitrobacter hamburgensis
           X14]
 gi|91799840|gb|ABE62215.1| flagellar basal-body rod protein FlgC [Nitrobacter hamburgensis
           X14]
          Length = 141

 Score = 45.6 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 9/49 (18%), Positives = 20/49 (40%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
             G ++  N NS+ EM  M    + + +   +I    + +   +  + S
Sbjct: 93  ASGNVKYPNVNSLVEMTDMRDAQRSYEANLNIISATRRMIQRTLDILKS 141



 Score = 45.6 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 11/116 (9%), Positives = 34/116 (29%), Gaps = 11/116 (9%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKN---- 50
             S +I  +   A   R+  +++N++N D+         +R     FS  +    +    
Sbjct: 9   MRSMSIATSGLRAQAGRMRVISENIANADSTAQVPGGDPYRRKVPTFSSALDRALDAKVV 68

Query: 51  DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106
            + +    +++ +        +  ++G      +                  +   
Sbjct: 69  SLGRVKPDMSTFRIKHEPSNPAADASGNVKYPNVNSLVEMTDMRDAQRSYEANLNI 124


>gi|182418356|ref|ZP_02949651.1| flagellar basal-body rod protein FlgC [Clostridium butyricum 5521]
 gi|237666561|ref|ZP_04526546.1| flagellar basal-body rod protein FlgC [Clostridium butyricum E4
           str. BoNT E BL5262]
 gi|182377738|gb|EDT75282.1| flagellar basal-body rod protein FlgC [Clostridium butyricum 5521]
 gi|237657760|gb|EEP55315.1| flagellar basal-body rod protein FlgC [Clostridium butyricum E4
           str. BoNT E BL5262]
          Length = 135

 Score = 45.6 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 19/42 (45%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N N + EM  M+  T+ + +     +  +    +A+
Sbjct: 90  GYVTMPNVNVLNEMADMMVATRSYEANVDTFNALKSMFSKAL 131



 Score = 40.2 bits (92), Expect = 0.28,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 33/114 (28%), Gaps = 7/114 (6%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G---FRTIKVKFSEVVGAIKNDIDQK 55
            S  I      A   R+ T+  NMSN  T     G   +      F E + A K     K
Sbjct: 5   KSMQISATGLSAERLRMDTITSNMSNARTTRSADGSGPYVRRIAVFQEALDANKEMAGVK 64

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109
              +      L KE         E  +    +     E    ++ TR     V 
Sbjct: 65  AVKIEKDNSPLRKEYNPNHPDADENGYVTMPNVNVLNEMADMMVATRSYEANVD 118


>gi|222112615|ref|YP_002554879.1| flagellar basal body rod protein [Acidovorax ebreus TPSY]
 gi|221732059|gb|ACM34879.1| flagellar basal body rod protein [Acidovorax ebreus TPSY]
          Length = 107

 Score = 45.6 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 20/58 (34%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
          M    +I  +   A + RL T A N++N +T GF    V                 S 
Sbjct: 8  MTALASIARSGLQAAQLRLGTSAHNVANLNTPGFTRQVVDQQAAPAQGGVQARTGRSG 65


>gi|87306349|ref|ZP_01088496.1| probable flagellar hook-associated protein [Blastopirellula
          marina DSM 3645]
 gi|87290528|gb|EAQ82415.1| probable flagellar hook-associated protein [Blastopirellula
          marina DSM 3645]
          Length = 567

 Score = 45.6 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 9/80 (11%), Positives = 25/80 (31%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
          S      A +A +  +    +N++N +T  +   +V ++        ++   +       
Sbjct: 6  SLQQSKNALVAAQIGIQVTGNNIANVNTPDYLRERVIYTPAPTQSYGNLRLGMGVQVEAV 65

Query: 64 EYLSKEVGSFISTGTELDFA 83
               +        +  D A
Sbjct: 66 VQQVDQFLEERLRNSISDLA 85



 Score = 43.7 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 6/38 (15%), Positives = 16/38 (42%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           S  +   E   +I   ++F + + LI   ++ +   + 
Sbjct: 529 SGVSLDEEAVNLITFQRQFQAASRLISVIDELLEVLVN 566


>gi|256830789|ref|YP_003159517.1| flagellar basal-body rod protein FlgB [Desulfomicrobium baculatum
          DSM 4028]
 gi|256579965|gb|ACU91101.1| flagellar basal-body rod protein FlgB [Desulfomicrobium baculatum
          DSM 4028]
          Length = 136

 Score = 45.6 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 20/39 (51%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50
               QR + V+ N++N +T G++   ++F + + A   
Sbjct: 16 MDFQLQRQNIVSANLANINTPGYKARTLEFEKDLQAALG 54


>gi|150019082|ref|YP_001311336.1| flagellar basal body rod protein FlgC [Clostridium beijerinckii
           NCIMB 8052]
 gi|149905547|gb|ABR36380.1| flagellar basal-body rod protein FlgC [Clostridium beijerinckii
           NCIMB 8052]
          Length = 135

 Score = 45.6 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 19/42 (45%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N N + EM  M+  T+ + +     +  +    +A+
Sbjct: 90  GYVTMPNVNVLNEMADMMVATRSYEANVDTFNALKSMFSKAL 131



 Score = 42.9 bits (99), Expect = 0.036,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 33/113 (29%), Gaps = 7/113 (6%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTV----G---FRTIKVKFSEVVGAIKNDIDQKI 56
           S  I      A   R+ T+  NM+N  T     G   +      F E + A K+    K 
Sbjct: 6   SMQISATGLSAERLRMDTITSNMANASTTRSANGKGPYVRKVAVFQEALDANKDMAGVKA 65

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109
             + +    L K             +    +     E    ++ TR     V 
Sbjct: 66  VKIENDPSPLRKVYDPTHPDADSNGYVTMPNVNVLNEMADMMVATRSYEANVD 118


>gi|289627760|ref|ZP_06460714.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
          aesculi str. NCPPB3681]
 gi|289651650|ref|ZP_06482993.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
          aesculi str. 2250]
 gi|330866419|gb|EGH01128.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
          aesculi str. 0893_23]
          Length = 137

 Score = 45.6 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 26/79 (32%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
            +  I   A     QR   +A+N+SN DT  F+   + FS V+ A  + +      +  
Sbjct: 6  DKALGIHEKALNFRAQRAEVLANNISNADTPNFKARDLDFSSVLAAENDKVQNGHFALNK 65

Query: 62 GKEYLSKEVGSFISTGTEL 80
                      +      
Sbjct: 66 TNSRHIHIEAEGMGNDDGT 84


>gi|257866376|ref|ZP_05646029.1| flagellar basal body rod protein FlgC [Enterococcus casseliflavus
           EC30]
 gi|257871287|ref|ZP_05650940.1| flagellar basal body rod protein FlgC [Enterococcus gallinarum EG2]
 gi|257873108|ref|ZP_05652761.1| flagellar basal body rod protein FlgC [Enterococcus casseliflavus
           EC10]
 gi|257875989|ref|ZP_05655642.1| flagellar basal body rod protein FlgC [Enterococcus casseliflavus
           EC20]
 gi|257800334|gb|EEV29362.1| flagellar basal body rod protein FlgC [Enterococcus casseliflavus
           EC30]
 gi|257805451|gb|EEV34273.1| flagellar basal body rod protein FlgC [Enterococcus gallinarum EG2]
 gi|257807272|gb|EEV36094.1| flagellar basal body rod protein FlgC [Enterococcus casseliflavus
           EC10]
 gi|257810155|gb|EEV38975.1| flagellar basal body rod protein FlgC [Enterococcus casseliflavus
           EC20]
          Length = 138

 Score = 45.6 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 21/42 (50%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++  SN +   EM  M+   + + +  +  + N+  + +A+
Sbjct: 92  GYVGQSNVDIADEMVAMLQAVRTYEANVSASEMNKTILKKAL 133



 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 15/123 (12%), Positives = 39/123 (31%), Gaps = 7/123 (5%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDID- 53
           M     I  +       +L T++ N++N +T        ++   + FSE +   +     
Sbjct: 3   MFNGLTINASGLALERLKLDTISSNIANVNTNQTQTTAAYQKKSILFSENLKNSREGTPA 62

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113
                V       ++++    +     D    G +   +      +L     ++     S
Sbjct: 63  TYGVKVTGIAADETEKLTYDPTNPAANDEGYVGQSNVDIADEMVAMLQAVRTYEANVSAS 122

Query: 114 LVS 116
            ++
Sbjct: 123 EMN 125


>gi|51246541|ref|YP_066425.1| flagellar hook-associated protein 1 (FlgK) [Desulfotalea
           psychrophila LSv54]
 gi|50877578|emb|CAG37418.1| related to Flagellar hook-associated protein 1 (FlgK) [Desulfotalea
           psychrophila LSv54]
          Length = 480

 Score = 45.6 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 24/232 (10%), Positives = 62/232 (26%), Gaps = 16/232 (6%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
            + N G  +    ++++    +N++N +T G+     K S                  + 
Sbjct: 6   NALNAGRTSLEVSQKQIEISGNNIANVNTKGYSKQSAKLSPYPAMNFGGFFVGQGVKVTD 65

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII------LTRDGRFKVTDDGSLVS 116
            +       S       +D+  E     +      I       L  D          L +
Sbjct: 66  VDRQHNTFISNQLVNKSVDYGYENSKTASFAEIERIFSVSKDNLAGDIDHFFDSWQELST 125

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
                 + D+      +       +  E  ++ +        G+  V+     +   N  
Sbjct: 126 KPTDVVLRDITLQKGSVLAAKFNNSANELDQVQKNIGAQLKSGVSEVNNKLKQLGELNDR 185

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228
           I          + +  + +           + E+ Q I     +   + +++
Sbjct: 186 IYQIENNGQTANGARDSRES---------LLQELAQTIGAQ-SYELSSGMVN 227



 Score = 42.9 bits (99), Expect = 0.040,   Method: Composition-based stats.
 Identities = 6/36 (16%), Positives = 12/36 (33%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +   EM  +I     F S    +   ++ M   + 
Sbjct: 443 VSLEEEMISLIQFQNSFQSSAKFLSTVDELMDTLLN 478


>gi|293395589|ref|ZP_06639872.1| flagellar hook-associated protein FlgK [Serratia odorifera DSM
          4582]
 gi|291421908|gb|EFE95154.1| flagellar hook-associated protein FlgK [Serratia odorifera DSM
          4582]
          Length = 549

 Score = 45.6 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 32/75 (42%), Gaps = 3/75 (4%)

Query: 1  MQTSF-NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE--VVGAIKNDIDQKIS 57
          M  S  N  ++   A +  LSTV++N+SN +  G+       ++   +G +   I   ++
Sbjct: 1  MSNSLINTAMSGLNAAQVALSTVSNNISNYNVAGYNRQTAILAQNGGMGTMSGFIGNGVT 60

Query: 58 FVASGKEYLSKEVGS 72
            +  +EY       
Sbjct: 61 VTSVNREYNQFITNQ 75


>gi|255030210|ref|ZP_05302161.1| flagellar basal body rod protein FlgB [Listeria monocytogenes
          LO28]
          Length = 107

 Score = 45.6 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 20/45 (44%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56
             L+     V++N++N +T  F+  +  F E +G+      Q  
Sbjct: 12 LNYLQTANQVVSNNIANANTPNFKASEASFEESLGSSLRASGQNS 56


>gi|253990121|ref|YP_003041477.1| flagellar hook-associated protein FlgK [Photorhabdus asymbiotica
          subsp. asymbiotica ATCC 43949]
 gi|253781571|emb|CAQ84734.1| flagellar hook-associated protein 1 flgK [Photorhabdus
          asymbiotica]
          Length = 547

 Score = 45.6 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 28/84 (33%), Gaps = 6/84 (7%)

Query: 1  MQTSF-NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFV 59
          M  S  N  ++   A +  L T+++N++N    G+          V          + F+
Sbjct: 1  MSNSLINTAMSGLQAAQIALGTLSNNVANMRVPGYNR-----QSTVINQNGGTMTSVGFI 55

Query: 60 ASGKEYLSKEVGSFISTGTELDFA 83
           +G    S           +L  A
Sbjct: 56 GNGVTVASINRQYNEFINQQLSSA 79


>gi|229544390|ref|ZP_04433448.1| flagellar basal-body rod protein FlgB [Bacillus coagulans 36D1]
 gi|229324875|gb|EEN90552.1| flagellar basal-body rod protein FlgB [Bacillus coagulans 36D1]
          Length = 129

 Score = 45.6 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 11/71 (15%), Positives = 23/71 (32%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A      R   +++N++N DT  ++   V F  V+    N I    +     +       
Sbjct: 14 ALQYASLRQKVISNNIANADTPNYKAQDVSFKNVLEDSVNAISATRTDPRHFRFSAGDSS 73

Query: 71 GSFISTGTELD 81
             ++      
Sbjct: 74 SEIVTESGTTY 84


>gi|86750885|ref|YP_487381.1| flagellar basal body rod protein FlgC [Rhodopseudomonas palustris
           HaA2]
 gi|86573913|gb|ABD08470.1| flagellar basal-body rod protein FlgC [Rhodopseudomonas palustris
           HaA2]
          Length = 141

 Score = 45.6 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 9/49 (18%), Positives = 20/49 (40%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
             G ++  N NSM EM  M    + + +   +I    + +   +  + +
Sbjct: 93  AAGNVKYPNVNSMIEMTDMRSAQRSYEANLNVISATRRMIQRTLDILKA 141



 Score = 42.9 bits (99), Expect = 0.034,   Method: Composition-based stats.
 Identities = 9/55 (16%), Positives = 21/55 (38%), Gaps = 7/55 (12%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKN 50
           S  I  +   A   R+  +++N++N D+         +R     F+  +    +
Sbjct: 10 RSMGIATSGLRAQAGRMRVISENIANADSTAQKPGGDPYRRKVPTFTSALDRSLD 64


>gi|304407695|ref|ZP_07389346.1| flagellar hook-associated protein FlgK [Paenibacillus
           curdlanolyticus YK9]
 gi|304343178|gb|EFM09021.1| flagellar hook-associated protein FlgK [Paenibacillus
           curdlanolyticus YK9]
          Length = 508

 Score = 45.6 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 9/75 (12%), Positives = 26/75 (34%), Gaps = 6/75 (8%)

Query: 168 GFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
           G   +E +  + N      +  S      G       +   EM ++I     +++    +
Sbjct: 436 GLQSQEANRQATNQQDIVTQVDSRRQSVSG------VSLDEEMSELIKYQHAYSAAARFM 489

Query: 228 DENEKSMLEAIRNIA 242
              ++++ + I  + 
Sbjct: 490 TTIDETLDKVINGMG 504



 Score = 42.9 bits (99), Expect = 0.035,   Method: Composition-based stats.
 Identities = 9/37 (24%), Positives = 16/37 (43%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
          S      +    +  +ST   N++N +T GF   +V 
Sbjct: 7  SIETAKRSLFTEQANISTTGHNIANANTPGFSRQRVN 43


>gi|296390550|ref|ZP_06880025.1| flagellar hook-associated protein FlgK [Pseudomonas aeruginosa
          PAb1]
          Length = 683

 Score = 45.6 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 9/52 (17%), Positives = 17/52 (32%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M    +IGL+     +  L+    N++N  T G+          +       
Sbjct: 1  MSDLLSIGLSGLGTSQTWLTITGHNITNVKTPGYSRQDAIQQTRIPQFSGAG 52


>gi|254496885|ref|ZP_05109733.1| flagellar basal body rod protein FlgC [Legionella drancourtii
           LLAP12]
 gi|254353904|gb|EET12591.1| flagellar basal body rod protein FlgC [Legionella drancourtii
           LLAP12]
          Length = 140

 Score = 45.6 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 13/93 (13%), Positives = 35/93 (37%)

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANS 206
           +      V      +  D     V+ + + +S   P    +  +     +GF+   N N 
Sbjct: 45  KYPIFKTVQENATQWMGDQINAGVQLKGTYVSTADPIKHYQPNNPQADAKGFIYTPNVNY 104

Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           + EM  +I  ++ +     L++  ++ +   ++
Sbjct: 105 VDEMANVISASRSYQMNIELVNNAKQLIQRTLQ 137


>gi|83716764|ref|YP_438387.1| flagellar basal-body rod protein FlgC [Burkholderia thailandensis
           E264]
 gi|257141420|ref|ZP_05589682.1| flagellar basal-body rod protein FlgC [Burkholderia thailandensis
           E264]
 gi|83650589|gb|ABC34653.1| flagellar basal-body rod protein FlgC [Burkholderia thailandensis
           E264]
          Length = 138

 Score = 45.6 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 19/42 (45%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G +   N N + EM  M+  ++ +++   ++       LE +
Sbjct: 93  GNVLYPNVNPVEEMTDMLSASRAYSTNVEVLGRVNSMQLELL 134



 Score = 40.6 bits (93), Expect = 0.20,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 36/101 (35%), Gaps = 11/101 (10%)

Query: 7   IGLAAQLALEQRLSTVADNMSNT--------DTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
           I  +A  A   RL+T+A N++N          T  +R  K  F+ +         +  + 
Sbjct: 9   IAGSAMSAQTVRLNTIASNLANADAASGAEDST--YRARKPVFASIFQLDAQGEPRGAAV 66

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
                   ++ +      G  L  A EG+  +   +P   +
Sbjct: 67  QVLDVVKSTEPLRKVHQPGHPLADA-EGNVLYPNVNPVEEM 106


>gi|325921021|ref|ZP_08182903.1| flagellar basal-body rod protein FlgB [Xanthomonas gardneri ATCC
           19865]
 gi|325548503|gb|EGD19475.1| flagellar basal-body rod protein FlgB [Xanthomonas gardneri ATCC
           19865]
          Length = 182

 Score = 45.6 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 24/50 (48%)

Query: 16  EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65
           EQR+  +A N+SN DT G++   + F   + + +   D  +      K Y
Sbjct: 69  EQRMKLIASNLSNVDTPGYKAKDMDFEAALKSAEGVRDGSLMQTTDAKHY 118


>gi|255522321|ref|ZP_05389558.1| flagellar basal body rod protein FlgG [Listeria monocytogenes FSL
           J1-175]
          Length = 107

 Score = 45.6 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/75 (16%), Positives = 29/75 (38%)

Query: 162 SVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221
           S + +   V+     +  N   T         ++ G +E SN +   EM Q++   +   
Sbjct: 25  SANQADSLVKDGEGRLHVNGINTMNLPAGQGIIQNGVIETSNVDLGVEMVQLMDNQRMVQ 84

Query: 222 SITTLIDENEKSMLE 236
           +   +++  +K   +
Sbjct: 85  ASKNVVNMFDKVYDK 99


>gi|254294559|ref|YP_003060582.1| flagellar hook-associated protein FlgK [Hirschia baltica ATCC
          49814]
 gi|254043090|gb|ACT59885.1| flagellar hook-associated protein FlgK [Hirschia baltica ATCC
          49814]
          Length = 714

 Score = 45.6 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 23/42 (54%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44
          +     L+A  A +  LSTV+ N++N +T G+  +   F+ +
Sbjct: 5  SIMATSLSALRANQSALSTVSTNVANVNTEGYTRLDTHFNSL 46



 Score = 38.7 bits (88), Expect = 0.81,   Method: Composition-based stats.
 Identities = 9/50 (18%), Positives = 21/50 (42%), Gaps = 2/50 (4%)

Query: 190 SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           + V ++R  +E    +   E+ +M    Q +NS + ++          +R
Sbjct: 665 TEVAMRRESVEG--VSIDEELVKMTQYQQAYNSASRMMQAASDMFDTLLR 712


>gi|111115119|ref|YP_709737.1| flagellar basal body rod protein FlgB [Borrelia afzelii PKo]
 gi|216263868|ref|ZP_03435862.1| flagellar basal-body rod protein FlgB [Borrelia afzelii ACA-1]
 gi|110890393|gb|ABH01561.1| flagellar basal-body rod protein [Borrelia afzelii PKo]
 gi|215979912|gb|EEC20734.1| flagellar basal-body rod protein FlgB [Borrelia afzelii ACA-1]
          Length = 135

 Score = 45.6 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 11/32 (34%), Positives = 17/32 (53%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
             L  R S ++DN++N DT  F+  K+ F  
Sbjct: 15 LDVLSLRQSVISDNIANVDTPNFKRSKISFES 46


>gi|289651639|ref|ZP_06482982.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
          aesculi str. 2250]
          Length = 686

 Score = 45.6 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 35/97 (36%), Gaps = 1/97 (1%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           +  +IGL+   A    ++T+ +N +N DT G+   +V  +     I   +        +
Sbjct: 1  MSLISIGLSGINASSAAINTIGNNTANVDTAGYSRQQVM-TTASAQINIGLGVGYIGTGT 59

Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98
              + +   S++    +   AL  DA          
Sbjct: 60 TLSDVRRIYNSYLDAQLQTSTALSADAVAYSGQASKT 96


>gi|119953093|ref|YP_945302.1| flagellar basal body rod protein FlgB [Borrelia turicatae 91E135]
 gi|119861864|gb|AAX17632.1| flagellar basal-body rod protein FlgB [Borrelia turicatae 91E135]
          Length = 137

 Score = 45.6 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 20/42 (47%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
            S ++       L  R S +ADN++N DT  F+  KV F  
Sbjct: 7  DRSIDLAHRYLDVLSLRQSVIADNVANVDTPNFKRSKVTFES 48


>gi|289627770|ref|ZP_06460724.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
          aesculi str. NCPPB3681]
 gi|330866430|gb|EGH01139.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
          aesculi str. 0893_23]
          Length = 686

 Score = 45.6 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 35/97 (36%), Gaps = 1/97 (1%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           +  +IGL+   A    ++T+ +N +N DT G+   +V  +     I   +        +
Sbjct: 1  MSLISIGLSGINASSAAINTIGNNTANVDTAGYSRQQVM-TTASAQINIGLGVGYIGTGT 59

Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98
              + +   S++    +   AL  DA          
Sbjct: 60 TLSDVRRIYNSYLDAQLQTSTALSADAVAYSGQASKT 96


>gi|323527706|ref|YP_004229859.1| flagellar hook-associated protein FlgK [Burkholderia sp. CCGE1001]
 gi|323384708|gb|ADX56799.1| flagellar hook-associated protein FlgK [Burkholderia sp. CCGE1001]
          Length = 657

 Score = 45.6 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 29/220 (13%), Positives = 63/220 (28%), Gaps = 9/220 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISF 58
           M    N+GL+   A +  L+T   N+SN  T G+      F+E  G         Q +S 
Sbjct: 1   MSNLINLGLSGLNAAQWGLTTTGQNISNASTPGYTIETPVFAETGGQYTGSGYLPQGVST 60

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD-GRFKVTDDGSLVSA 117
           V   ++Y         +  +        ++  +  +      T        +    + + 
Sbjct: 61  VTVTRQYSQYLTTQLNNAQSSSSSLSTYNSLISQLNNLVGSPTAGIASAITSYFTGMQNV 120

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177
           +     L      +   Q           +     + + T    +V     + ++     
Sbjct: 121 ANNASSLATRQTAMSGAQTLANQINAAGQQYDALRESVNTQLSNTVSQINSYTQQIAQLN 180

Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217
                 +         + +  L  SN      + Q+I + 
Sbjct: 181 GQINAASTQGQPPNQLLDQRDLAVSN------LSQLIGVQ 214



 Score = 36.0 bits (81), Expect = 4.1,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 13/37 (35%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N   E   ++   Q + + + +I   +      +
Sbjct: 617 SGVNINEEAANLLQYQQLYQANSKVIQTAQTLFQTLL 653


>gi|195941352|ref|ZP_03086734.1| flagellar basal body rod protein FlgB [Borrelia burgdorferi 80a]
 gi|216264410|ref|ZP_03436402.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi 156a]
 gi|218249205|ref|YP_002374817.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi ZS7]
 gi|221217697|ref|ZP_03589165.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi 72a]
 gi|224533198|ref|ZP_03673798.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi
          WI91-23]
 gi|224533758|ref|ZP_03674346.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi
          CA-11.2a]
 gi|225549095|ref|ZP_03770070.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi 94a]
 gi|225550185|ref|ZP_03771145.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi 118a]
 gi|226320595|ref|ZP_03796155.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi
          29805]
 gi|226321612|ref|ZP_03797138.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi
          Bol26]
 gi|1196315|gb|AAB51407.1| flagellar basal body rod protein [Borrelia burgdorferi]
 gi|215980883|gb|EEC21690.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi 156a]
 gi|218164393|gb|ACK74454.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi ZS7]
 gi|221192374|gb|EEE18593.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi 72a]
 gi|224511925|gb|EEF82326.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi
          WI91-23]
 gi|224513051|gb|EEF83414.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi
          CA-11.2a]
 gi|225369297|gb|EEG98750.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi 118a]
 gi|225370321|gb|EEG99759.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi 94a]
 gi|226232801|gb|EEH31554.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi
          Bol26]
 gi|226234014|gb|EEH32735.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi
          29805]
 gi|312148512|gb|ADQ31171.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi JD1]
 gi|312149176|gb|ADQ29247.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi N40]
          Length = 135

 Score = 45.6 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/32 (34%), Positives = 17/32 (53%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
             L  R S ++DN++N DT  F+  K+ F  
Sbjct: 15 LDVLSLRQSVISDNIANVDTPNFKRSKISFES 46


>gi|227873538|ref|ZP_03991783.1| flagellar basal body rod protein [Oribacterium sinus F0268]
 gi|227840628|gb|EEJ51013.1| flagellar basal body rod protein [Oribacterium sinus F0268]
          Length = 136

 Score = 45.6 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 6/44 (13%), Positives = 19/44 (43%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            +G++   N + + E    +  T+ + +  T ++  +     A+
Sbjct: 89  AQGYVNYPNVDILKETVDSMSATRSYEANVTALNAMKTMAQRAL 132



 Score = 38.3 bits (87), Expect = 0.90,   Method: Composition-based stats.
 Identities = 10/97 (10%), Positives = 26/97 (26%), Gaps = 14/97 (14%)

Query: 12 QLALEQRLSTVADNMSNTDTV------GFRTIKVK--------FSEVVGAIKNDIDQKIS 57
            A   R+   A+N++N DT        ++   V         F + +   +N    +  
Sbjct: 1  MSAQRVRMDIAAENIANVDTTRTEAGSAYKRKDVVLESFGERSFQQALRNAQNGKGFRGQ 60

Query: 58 FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES 94
                + +  +               +   +    +
Sbjct: 61 HAGVRVQGVITDDREMKRVYNPNHPDADAQGYVNYPN 97


>gi|242278491|ref|YP_002990620.1| flagellar hook-associated protein FlgK [Desulfovibrio salexigens
           DSM 2638]
 gi|242121385|gb|ACS79081.1| flagellar hook-associated protein FlgK [Desulfovibrio salexigens
           DSM 2638]
          Length = 704

 Score = 45.6 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 7/37 (18%), Positives = 14/37 (37%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N   EM  +I     + +   LI   ++ +   +
Sbjct: 664 SGVNIDEEMSNLIKYQHSYTAAAKLITTADQMLQTLL 700



 Score = 40.6 bits (93), Expect = 0.18,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 27/79 (34%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           +  N+G  A  A +  +S   DN+SN +T G+   KV+  E V    N         A+
Sbjct: 5  NSLLNLGTGALFASQSAISVTGDNISNVNTEGYSRRKVRLEERVSINYNPGQLGTGVRAA 64

Query: 62 GKEYLSKEVGSFISTGTEL 80
                 +           
Sbjct: 65 EVYRNFDQFVENSYNDKAT 83


>gi|332702980|ref|ZP_08423068.1| flagellar basal-body rod protein FlgC [Desulfovibrio africanus
          str. Walvis Bay]
 gi|332553129|gb|EGJ50173.1| flagellar basal-body rod protein FlgC [Desulfovibrio africanus
          str. Walvis Bay]
          Length = 147

 Score = 45.6 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 22/48 (45%), Gaps = 6/48 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43
           T+ ++  +   A   +L+ ++ N++N +T     G  +R   V F  
Sbjct: 4  MTALDVAASGLTAKRTQLNIISSNLANINTTRTAEGGPYRRKTVVFQT 51



 Score = 41.8 bits (96), Expect = 0.093,   Method: Composition-based stats.
 Identities = 8/45 (17%), Positives = 18/45 (40%), Gaps = 5/45 (11%)

Query: 200 EDSNA-----NSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           E  N      N + EM  MI   + + +    ++  +    +A++
Sbjct: 98  EFGNVRFPDINVVEEMAHMITAMRSYEANAASVESIKSMFSKALQ 142


>gi|319765009|ref|YP_004128946.1| flagellar basal body rod protein [Alicycliphilus denitrificans
          BC]
 gi|330827204|ref|YP_004390507.1| flagellar basal body rod protein [Alicycliphilus denitrificans
          K601]
 gi|317119570|gb|ADV02059.1| flagellar basal body rod protein [Alicycliphilus denitrificans
          BC]
 gi|329312576|gb|AEB86991.1| flagellar basal body rod protein [Alicycliphilus denitrificans
          K601]
          Length = 107

 Score = 45.6 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 18/58 (31%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
          M    +I  +   A + RL + A N++N  T GF    V                   
Sbjct: 8  MTPLASIARSGLQAAQLRLDSSAHNVANLGTPGFARQAVDQQAAPAQGGVQARTGRFG 65


>gi|218463663|ref|ZP_03503754.1| hypothetical protein RetlK5_31494 [Rhizobium etli Kim 5]
          Length = 106

 Score = 45.6 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 8/29 (27%), Positives = 16/29 (55%)

Query: 6  NIGLAAQLALEQRLSTVADNMSNTDTVGF 34
          N  L+   A   R+  +A+N++N+ T  +
Sbjct: 8  NTALSGMRAQTTRIGAIANNIANSSTPDY 36


>gi|6502601|gb|AAF14368.1|AF133240_2 flagellar proximal rod protein FlgC [Rhodobacter sphaeroides]
          Length = 139

 Score = 45.6 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 30/87 (34%), Gaps = 6/87 (6%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDT------VGFRTIKVKFSEVVGAIKNDIDQK 55
           + FN+G  A  A   R++TVA N++N  T        FR ++  F              
Sbjct: 6  DSVFNVGARALSAQMVRMNTVASNLANAGTVSDRAETAFRPLRPVFETSYADAVGRTGLS 65

Query: 56 ISFVASGKEYLSKEVGSFISTGTELDF 82
           + VA       +    +     + D 
Sbjct: 66 TTDVAGVVSLDREPARVYRPDHPQADP 92



 Score = 34.8 bits (78), Expect = 9.9,   Method: Composition-based stats.
 Identities = 4/36 (11%), Positives = 13/36 (36%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +   EM +M+  ++++ +    +      M     
Sbjct: 101 VSVDEEMVEMMEASRQYQNTLEAVSTLRSLMARTAS 136


>gi|134300275|ref|YP_001113771.1| flagellar hook-associated protein FlgK [Desulfotomaculum reducens
           MI-1]
 gi|134052975|gb|ABO50946.1| flagellar hook-associated protein FlgK [Desulfotomaculum reducens
           MI-1]
          Length = 586

 Score = 45.6 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 6/41 (14%), Positives = 16/41 (39%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  +   E+ ++I     + +   +I   ++ +   I  I 
Sbjct: 546 SGVSIDEELTKVIQYQYGYQACARMISMQDEMLDYLINRIR 586



 Score = 45.2 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 18/209 (8%), Positives = 49/209 (23%), Gaps = 8/209 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
              I         + +     N++N +T G+   +   S          D   +      
Sbjct: 7   GLEIAKRGTQVYRKAMDVTGHNITNANTPGYSRQEAVIS--PSTPWTRPDYLTAMTPGQL 64

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL---TRDGRFKVTDDGSLVSASGK 120
              +            LD  +     F     + + +   T     +    G  ++    
Sbjct: 65  GTGADVKEVRRIRDYYLDVQMRNSGSFEGYWEKKLDMAKRTETVFLEPDGRGLQLTLLNF 124

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
           +      +   Q P   +          +   ++   +      ++     + +      
Sbjct: 125 FNDWQNLNNSPQDPGVKKAVKETGDELATIFRQMHNQLSNIDKTVNSSLQYQVDQVNHLT 184

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYE 209
                L +     +  G     N + + E
Sbjct: 185 TRIAELSNTIINVIGNGA--QPN-DLLDE 210


>gi|124268248|ref|YP_001022252.1| flagellar hook-associated protein [Methylibium petroleiphilum
          PM1]
 gi|124261023|gb|ABM96017.1| flagellar hook-associated protein [Methylibium petroleiphilum
          PM1]
          Length = 653

 Score = 45.6 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M    ++G  A  A    L T+ +N++N +T G+   +V+     G      
Sbjct: 1  MAGLMSLGTRAMFANYATLQTIGNNIANANTPGYSRQQVELGTAGGQSTGAG 52


>gi|225548519|ref|ZP_03769567.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi 94a]
 gi|225370782|gb|EEH00217.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi 94a]
          Length = 627

 Score = 45.2 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 16/41 (39%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E+  MI   Q F + +  I  + + +   I  + 
Sbjct: 586 SGVNKDEELANMIEFQQAFIAASKFITVSVELIDTVINKMG 626



 Score = 35.6 bits (80), Expect = 5.9,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 19/46 (41%), Gaps = 3/46 (6%)

Query: 1  MQT---SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
          M +      IG  +  A +  ++TV  N+SN    G+   +V    
Sbjct: 1  MDSTFSGIEIGKRSLFAHKDAMNTVGHNLSNATKPGYSRQRVTMKT 46


>gi|196044999|ref|ZP_03112232.1| flagellar basal-body rod protein FlgC [Bacillus cereus 03BB108]
 gi|225863603|ref|YP_002748981.1| flagellar basal-body rod protein FlgC [Bacillus cereus 03BB102]
 gi|229183936|ref|ZP_04311152.1| Flagellar basal-body rod protein FlgC [Bacillus cereus BGSC 6E1]
 gi|196024001|gb|EDX62675.1| flagellar basal-body rod protein FlgC [Bacillus cereus 03BB108]
 gi|225788684|gb|ACO28901.1| flagellar basal-body rod protein FlgC [Bacillus cereus 03BB102]
 gi|228599588|gb|EEK57192.1| Flagellar basal-body rod protein FlgC [Bacillus cereus BGSC 6E1]
 gi|324325762|gb|ADY21022.1| flagellar basal body rod protein FlgC [Bacillus thuringiensis
           serovar finitimus YBT-020]
          Length = 137

 Score = 45.2 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 22/40 (55%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           G++   N +   EM  ++   + + + T++++ N+K + +
Sbjct: 91  GYVRYPNVDVTAEMTNVMVAQKMYEANTSVLNANKKMLDK 130



 Score = 41.8 bits (96), Expect = 0.094,   Method: Composition-based stats.
 Identities = 5/33 (15%), Positives = 13/33 (39%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG 33
          M  + N   +      + +   ++N+ N +T  
Sbjct: 1  MFQAINASGSGLTTARKWMEVTSNNIVNANTTA 33


>gi|188581884|ref|YP_001925329.1| flagellar basal body rod protein FlgC [Methylobacterium populi
           BJ001]
 gi|179345382|gb|ACB80794.1| flagellar basal-body rod protein FlgC [Methylobacterium populi
           BJ001]
          Length = 136

 Score = 45.2 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 16/109 (14%), Positives = 30/109 (27%), Gaps = 10/109 (9%)

Query: 1   MQ--TSFNIGLAAQLALEQRLSTVADNMSNTD----TVG---FRTIKVKFSEVVGAIKN- 50
           M    S  I  +   A   R+  +A+N++N D    T G   +R     F+       N 
Sbjct: 1   MDFLKSLGIAASGLKAQSGRMRIIAENIANADSAAQTPGGDPYRRKIPTFTNRFDRELNA 60

Query: 51  DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
            + +          + +K      +     +  L               
Sbjct: 61  SVVEAGRVRRDPTPFRTKYDPGNPAADARGEVRLPNVNGLIENMDMREA 109



 Score = 37.9 bits (86), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/101 (10%), Positives = 31/101 (30%)

Query: 143 GEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDS 202
              G    + K+      +  +++   V        P    T  +  +     RG +   
Sbjct: 36  QTPGGDPYRRKIPTFTNRFDRELNASVVEAGRVRRDPTPFRTKYDPGNPAADARGEVRLP 95

Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           N N + E   M    + + +   ++    + +   +  + +
Sbjct: 96  NVNGLIENMDMREAQRSYEANLNMVTATRRMISRTLEILKA 136


>gi|157362948|ref|YP_001469715.1| flagellar basal-body rod protein FlgB [Thermotoga lettingae TMO]
 gi|157313552|gb|ABV32651.1| flagellar basal-body rod protein FlgB [Thermotoga lettingae TMO]
          Length = 125

 Score = 45.2 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 19/41 (46%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50
           A      R +  A N++N +T G++   V F E++    +
Sbjct: 11 TAMDVAILRQNIFAQNIANAETPGYKRKYVVFEELLNQAMS 51


>gi|229827759|ref|ZP_04453828.1| hypothetical protein GCWU000182_03151 [Abiotrophia defectiva ATCC
          49176]
 gi|229787958|gb|EEP24072.1| hypothetical protein GCWU000182_03151 [Abiotrophia defectiva ATCC
          49176]
          Length = 633

 Score = 45.2 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 22/38 (57%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39
           TSF +G++   A +  L+  A N++N DT G+   +V
Sbjct: 4  MTSFGVGVSGLNAAQNSLNATAHNITNADTKGYVRQQV 41



 Score = 43.3 bits (100), Expect = 0.029,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 18/40 (45%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
            +S  E+  MI   Q FN+ +  I   ++ +   +  + S
Sbjct: 594 VSSDEELTHMIKFQQAFNAASRYITVIDEMLEHVVTRLGS 633


>gi|195941912|ref|ZP_03087294.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi 80a]
 gi|225549791|ref|ZP_03770755.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi 118a]
 gi|225369599|gb|EEG99048.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi 118a]
 gi|312149645|gb|ADQ29716.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi N40]
          Length = 627

 Score = 45.2 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 16/41 (39%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E+  MI   Q F + +  I  + + +   I  + 
Sbjct: 586 SGVNKDEELANMIEFQQAFIAASKFITVSVELIDTVINKMG 626



 Score = 35.6 bits (80), Expect = 5.9,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 19/46 (41%), Gaps = 3/46 (6%)

Query: 1  MQT---SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
          M +      IG  +  A +  ++TV  N+SN    G+   +V    
Sbjct: 1  MDSTFSGIEIGKRSLFAHKDAMNTVGHNLSNATKPGYSRQRVTMKT 46


>gi|146335607|gb|ABQ23406.1| FlgK [Pseudomonas syringae pv. averrhoi]
          Length = 686

 Score = 45.2 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 35/97 (36%), Gaps = 1/97 (1%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           +  +IGL+   A    ++T+ +N +N DT G+   +V  +     I   +        +
Sbjct: 1  MSLISIGLSGINASSAAINTIGNNTANVDTAGYSRQQVM-TTASAQINIGLGVGYIGTGT 59

Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98
              + +   S++    +   AL  DA          
Sbjct: 60 TLSDVRRIYNSYLDAQLQTSTALSADAVAYSGQASKT 96


>gi|71733906|ref|YP_275555.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
          phaseolicola 1448A]
 gi|298487849|ref|ZP_07005889.1| Flagellar hook-associated protein flgK [Pseudomonas savastanoi
          pv. savastanoi NCPPB 3335]
 gi|71554459|gb|AAZ33670.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
          phaseolicola 1448A]
 gi|298157574|gb|EFH98654.1| Flagellar hook-associated protein flgK [Pseudomonas savastanoi
          pv. savastanoi NCPPB 3335]
 gi|320325100|gb|EFW81169.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
          glycinea str. B076]
          Length = 686

 Score = 45.2 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 35/97 (36%), Gaps = 1/97 (1%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           +  +IGL+   A    ++T+ +N +N DT G+   +V  +     I   +        +
Sbjct: 1  MSLISIGLSGINASSAAINTIGNNTANVDTAGYSRQQVM-TTASAQINIGLGVGYIGTGT 59

Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98
              + +   S++    +   AL  DA          
Sbjct: 60 TLSDVRRIYNSYLDAQLQTSTALSADAVAYSGQASKT 96


>gi|257484939|ref|ZP_05638980.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
          tabaci ATCC 11528]
 gi|49205098|dbj|BAC75962.2| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
          tabaci]
 gi|330986475|gb|EGH84578.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
          lachrymans str. M301315]
 gi|331011049|gb|EGH91105.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
          tabaci ATCC 11528]
          Length = 686

 Score = 45.2 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 35/97 (36%), Gaps = 1/97 (1%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           +  +IGL+   A    ++T+ +N +N DT G+   +V  +     I   +        +
Sbjct: 1  MSLISIGLSGINASSAAINTIGNNTANVDTAGYSRQQVM-TTASAQINIGLGVGYIGTGT 59

Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98
              + +   S++    +   AL  DA          
Sbjct: 60 TLSDVRRIYNSYLDAQLQTSTALSADAVAYSGQASKT 96


>gi|224532827|ref|ZP_03673442.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi
           WI91-23]
 gi|224512216|gb|EEF82602.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi
           WI91-23]
          Length = 627

 Score = 45.2 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 16/41 (39%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E+  MI   Q F + +  I  + + +   I  + 
Sbjct: 586 SGVNKDEELANMIEFQQAFIAASKFITVSVELIDTVINKMG 626



 Score = 35.6 bits (80), Expect = 5.9,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 19/46 (41%), Gaps = 3/46 (6%)

Query: 1  MQT---SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
          M +      IG  +  A +  ++TV  N+SN    G+   +V    
Sbjct: 1  MDSTFSGIEIGKRSLFAHKDAMNTVGHNLSNATKPGYSRQRVTMKT 46


>gi|134280730|ref|ZP_01767440.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
           305]
 gi|125657215|gb|ABN48703.1| flagellar basal body protein [Burkholderia pseudomallei]
 gi|134247752|gb|EBA47836.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
           305]
          Length = 124

 Score = 45.2 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 30/94 (31%), Gaps = 2/94 (2%)

Query: 10  AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69
            A     +R   +A N++N DT G+R   + F   +     D        A         
Sbjct: 14  TALKLRAERTKVIASNLANLDTPGYRARDLDFKRSLAEAGGDGAHARPGDALTGGVTLGY 73

Query: 70  VGSFI--STGTELDFALEGDAWFALESPRGIILT 101
              +     G  ++  +E  A+        + LT
Sbjct: 74  RVPYQAAQDGNTVELGIEQAAFAQNAVDFQMSLT 107


>gi|152985328|ref|YP_001349653.1| flagellar basal body rod protein FlgB [Pseudomonas aeruginosa
          PA7]
 gi|150960486|gb|ABR82511.1| flagellar basal-body rod protein FlgB [Pseudomonas aeruginosa
          PA7]
          Length = 135

 Score = 45.2 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 28/76 (36%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
            +  I   A     QR   +A+N++N DT  ++   + F  V+   K+   +      +
Sbjct: 6  DRALGIHPQALSFRAQRAEVLANNLANADTPNYKARDLDFGAVLAEQKDKAAKGTFATRT 65

Query: 62 GKEYLSKEVGSFISTG 77
            E      G  +  G
Sbjct: 66 TNERHIAAEGFGMGEG 81


>gi|22127321|ref|NP_670744.1| flagellar hook-associated protein FlgK [Yersinia pestis KIM 10]
 gi|45442802|ref|NP_994341.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
          Microtus str. 91001]
 gi|108809049|ref|YP_652965.1| flagellar hook-associated protein FlgK [Yersinia pestis Antiqua]
 gi|108810754|ref|YP_646521.1| flagellar hook-associated protein FlgK [Yersinia pestis Nepal516]
 gi|145597823|ref|YP_001161899.1| flagellar hook-associated protein FlgK [Yersinia pestis Pestoides
          F]
 gi|150260243|ref|ZP_01916971.1| lateral flagellar hook-associated protein 1 [Yersinia pestis
          CA88-4125]
 gi|162420194|ref|YP_001604841.1| flagellar hook-associated protein FlgK [Yersinia pestis Angola]
 gi|165925087|ref|ZP_02220919.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
          Orientalis str. F1991016]
 gi|165939060|ref|ZP_02227612.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
          Orientalis str. IP275]
 gi|166008985|ref|ZP_02229883.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
          Antiqua str. E1979001]
 gi|166212172|ref|ZP_02238207.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
          Antiqua str. B42003004]
 gi|167399689|ref|ZP_02305213.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
          Antiqua str. UG05-0454]
 gi|167419324|ref|ZP_02311077.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
          Orientalis str. MG05-1020]
 gi|167425178|ref|ZP_02316931.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
          Mediaevalis str. K1973002]
 gi|167466331|ref|ZP_02331035.1| flagellar hook-associated protein FlgK [Yersinia pestis FV-1]
 gi|218927918|ref|YP_002345793.1| flagellar hook-associated protein FlgK [Yersinia pestis CO92]
 gi|229837414|ref|ZP_04457577.1| Flagellar hook-associated protein flgK [Yersinia pestis Pestoides
          A]
 gi|229840629|ref|ZP_04460788.1| Flagellar hook-associated protein flgK [Yersinia pestis biovar
          Orientalis str. PEXU2]
 gi|229842820|ref|ZP_04462972.1| Flagellar hook-associated protein flgK [Yersinia pestis biovar
          Orientalis str. India 195]
 gi|229900951|ref|ZP_04516075.1| Flagellar hook-associated protein flgK [Yersinia pestis Nepal516]
 gi|270487666|ref|ZP_06204740.1| flagellar hook-associated protein FlgK [Yersinia pestis KIM D27]
 gi|294502794|ref|YP_003566856.1| flagellar hook-associated protein [Yersinia pestis Z176003]
 gi|21960402|gb|AAM86995.1|AE013948_3 putative flagellar hook-associated protein [Yersinia pestis KIM
          10]
 gi|45437668|gb|AAS63218.1| putative flagellar hook-associated protein [Yersinia pestis
          biovar Microtus str. 91001]
 gi|108774402|gb|ABG16921.1| flagellar hook-associated protein [Yersinia pestis Nepal516]
 gi|108780962|gb|ABG15020.1| putative flagellar hook-associated protein [Yersinia pestis
          Antiqua]
 gi|115346529|emb|CAL19406.1| putative flagellar hook-associated protein [Yersinia pestis CO92]
 gi|145209519|gb|ABP38926.1| flagellar hook-associated protein [Yersinia pestis Pestoides F]
 gi|149289651|gb|EDM39728.1| lateral flagellar hook-associated protein 1 [Yersinia pestis
          CA88-4125]
 gi|162353009|gb|ABX86957.1| flagellar hook-associated protein FlgK [Yersinia pestis Angola]
 gi|165913016|gb|EDR31641.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
          Orientalis str. IP275]
 gi|165923287|gb|EDR40438.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
          Orientalis str. F1991016]
 gi|165992324|gb|EDR44625.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
          Antiqua str. E1979001]
 gi|166206918|gb|EDR51398.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
          Antiqua str. B42003004]
 gi|166963318|gb|EDR59339.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
          Orientalis str. MG05-1020]
 gi|167052193|gb|EDR63601.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
          Antiqua str. UG05-0454]
 gi|167055941|gb|EDR65722.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar
          Mediaevalis str. K1973002]
 gi|229682290|gb|EEO78382.1| Flagellar hook-associated protein flgK [Yersinia pestis Nepal516]
 gi|229690087|gb|EEO82144.1| Flagellar hook-associated protein flgK [Yersinia pestis biovar
          Orientalis str. India 195]
 gi|229696995|gb|EEO87042.1| Flagellar hook-associated protein flgK [Yersinia pestis biovar
          Orientalis str. PEXU2]
 gi|229705537|gb|EEO91547.1| Flagellar hook-associated protein flgK [Yersinia pestis Pestoides
          A]
 gi|262360826|gb|ACY57547.1| flagellar hook-associated protein [Yersinia pestis D106004]
 gi|262364771|gb|ACY61328.1| flagellar hook-associated protein [Yersinia pestis D182038]
 gi|270336170|gb|EFA46947.1| flagellar hook-associated protein FlgK [Yersinia pestis KIM D27]
 gi|294353253|gb|ADE63594.1| flagellar hook-associated protein [Yersinia pestis Z176003]
 gi|320016705|gb|ADW00277.1| Flagellar hook-associated protein flgK [Yersinia pestis biovar
          Medievalis str. Harbin 35]
          Length = 453

 Score = 45.2 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 7/53 (13%), Positives = 20/53 (37%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54
                  +   A +  L+  + N++N  T G+   + + S +    +  ++ 
Sbjct: 1  MNFIRTAFSGMQATQAHLNATSMNIANMHTPGYSRQRAEQSAIGADGQGGVNA 53



 Score = 38.7 bits (88), Expect = 0.74,   Method: Composition-based stats.
 Identities = 6/37 (16%), Positives = 15/37 (40%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N+  E   ++   + + S   +I   +K   + +
Sbjct: 414 SGVNNDEEAMNLMEYQRAYQSNMKVIATGDKLFSDLL 450


>gi|330875990|gb|EGH10139.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
          morsprunorum str. M302280PT]
          Length = 686

 Score = 45.2 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 35/97 (36%), Gaps = 1/97 (1%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           +  +IGL+   A    ++T+ +N +N DT G+   +V  +     I   +        +
Sbjct: 1  MSLISIGLSGINASSAAINTIGNNTANVDTAGYSRQQVM-TTASAQINIGLGVGYIGTGT 59

Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98
              + +    ++    +   AL  DA         I
Sbjct: 60 TLSDVRRIYNGYLDAQLQTSTALSADAVAYSGQASKI 96


>gi|269836594|ref|YP_003318822.1| flagellar hook-associated protein FlgK [Sphaerobacter
          thermophilus DSM 20745]
 gi|269785857|gb|ACZ38000.1| flagellar hook-associated protein FlgK [Sphaerobacter
          thermophilus DSM 20745]
          Length = 471

 Score = 45.2 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 13/36 (36%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
              L A    ++ +     N++N +T GF      
Sbjct: 8  LETLLRALQTQQRAVDVTNHNIANANTPGFSRQVAA 43



 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 4/40 (10%), Positives = 14/40 (35%)

Query: 200 EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           E +  +   E   +I     + +    +   ++ + + I 
Sbjct: 425 EVAGVSLDEEAVNLIKYQHAYQAAARAMTVVDEMLDKLIN 464


>gi|15594526|ref|NP_212315.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi B31]
 gi|216264299|ref|ZP_03436291.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi 156a]
 gi|221217529|ref|ZP_03588999.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi 72a]
 gi|223889273|ref|ZP_03623861.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi 64b]
 gi|226321499|ref|ZP_03797025.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi Bol26]
 gi|3915691|sp|P70859|FLGK_BORBU RecName: Full=Flagellar hook-associated protein 1; Short=HAP1
 gi|2688082|gb|AAC66579.1| flagellar hook-associated protein (flgK) [Borrelia burgdorferi B31]
 gi|215980772|gb|EEC21579.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi 156a]
 gi|221192592|gb|EEE18809.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi 72a]
 gi|223885306|gb|EEF56408.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi 64b]
 gi|226232688|gb|EEH31441.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi Bol26]
 gi|312148243|gb|ADQ30902.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi JD1]
          Length = 627

 Score = 45.2 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 16/41 (39%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E+  MI   Q F + +  I  + + +   I  + 
Sbjct: 586 SGVNKDEELANMIEFQQAFIAASKFITVSVELIDTVINKMG 626



 Score = 35.6 bits (80), Expect = 6.0,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 19/46 (41%), Gaps = 3/46 (6%)

Query: 1  MQT---SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
          M +      IG  +  A +  ++TV  N+SN    G+   +V    
Sbjct: 1  MDSTFSGIEIGKRSLFAHKDAMNTVGHNLSNATKPGYSRQRVTMKT 46


>gi|330967097|gb|EGH67357.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
          actinidiae str. M302091]
          Length = 686

 Score = 45.2 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 16/97 (16%), Positives = 34/97 (35%), Gaps = 1/97 (1%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           +  +IGL+   A    ++T+ +N +N DT G+   +V  +     I   +        +
Sbjct: 1  MSLISIGLSGINASSAAINTIGNNTANVDTAGYSRQQVM-TTASAQINIGLGVGYIGTGT 59

Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98
              + +    ++    +   AL  DA          
Sbjct: 60 TLSDVRRIYNGYLDAQLQTSTALSADAVAYSGQASKT 96


>gi|224417697|ref|ZP_03655703.1| flagellar basal body rod protein FlgC [Helicobacter canadensis MIT
           98-5491]
 gi|253827046|ref|ZP_04869931.1| flagellar basal body rod protein [Helicobacter canadensis MIT
           98-5491]
 gi|313141240|ref|ZP_07803433.1| flagellar basal body rod protein FlgC [Helicobacter canadensis MIT
           98-5491]
 gi|253510452|gb|EES89111.1| flagellar basal body rod protein [Helicobacter canadensis MIT
           98-5491]
 gi|313130271|gb|EFR47888.1| flagellar basal body rod protein FlgC [Helicobacter canadensis MIT
           98-5491]
          Length = 166

 Score = 45.2 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 18/43 (41%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N++ EM  +I  T+ + +        +     AI 
Sbjct: 120 GYVAYPNINAVVEMADLIEATKAYQANVAAFQSAKNMANNAIS 162



 Score = 39.1 bits (89), Expect = 0.61,   Method: Composition-based stats.
 Identities = 9/31 (29%), Positives = 18/31 (58%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32
           +SF+I      A  QR++ ++ N++N +T 
Sbjct: 3  LSSFDISGYGLSAQRQRVNLISSNIANANTT 33


>gi|218249283|ref|YP_002374709.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi ZS7]
 gi|218164471|gb|ACK74532.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi ZS7]
          Length = 627

 Score = 45.2 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 16/41 (39%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E+  MI   Q F + +  I  + + +   I  + 
Sbjct: 586 SGVNKDEELANMIEFQQAFIAASKFITVSVELIDTVINKMG 626



 Score = 35.6 bits (80), Expect = 6.0,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 19/46 (41%), Gaps = 3/46 (6%)

Query: 1  MQT---SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
          M +      IG  +  A +  ++TV  N+SN    G+   +V    
Sbjct: 1  MDSTFSGIEIGKRSLFAHKDAMNTVGHNLSNATKPGYSRQRVTMKT 46


>gi|325921022|ref|ZP_08182904.1| flagellar basal-body rod protein FlgC [Xanthomonas gardneri ATCC
           19865]
 gi|325548504|gb|EGD19476.1| flagellar basal-body rod protein FlgC [Xanthomonas gardneri ATCC
           19865]
          Length = 135

 Score = 45.2 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 6/43 (13%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   + + + +M  MI  ++ + +   +++  ++  L  I 
Sbjct: 90  GYVFSPDVDPVAQMVNMISASRNYQAGVEMLNTAKELALATIT 132



 Score = 35.6 bits (80), Expect = 6.7,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 31/84 (36%), Gaps = 8/84 (9%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKISF 58
          F++  +A  A   RLST+A N++N D+V       ++ I+  F       + D       
Sbjct: 7  FDVAGSALHAQSVRLSTIASNLANADSVAGSAEATYKPIEPIFQA--RQNRQDPSLTSVN 64

Query: 59 VASGKEYLSKEVGSFISTGTELDF 82
          V       +  +  +       D 
Sbjct: 65 VKEITTTNAPPIRRYEPGHPLADA 88


>gi|51894141|ref|YP_076832.1| flagella basal body rod protein [Symbiobacterium thermophilum IAM
          14863]
 gi|51857830|dbj|BAD41988.1| flagella basal body rod protein [Symbiobacterium thermophilum IAM
          14863]
          Length = 147

 Score = 45.2 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 25/78 (32%), Gaps = 13/78 (16%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVK-------FSEVVGA 47
          M  +     +A  A   R+  +A+N++N  T     G  +R   V        F+  +  
Sbjct: 3  MFQAMEASASALTAERLRMDVIANNLANYRTTRTAEGGPYRRRTVVVEERPNTFASELAR 62

Query: 48 IKNDIDQKISFVASGKEY 65
                +    V   +  
Sbjct: 63 QAGRPAEPGLGVRVTQIV 80



 Score = 42.5 bits (98), Expect = 0.046,   Method: Composition-based stats.
 Identities = 7/46 (15%), Positives = 20/46 (43%), Gaps = 1/46 (2%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G +   N + + E+  ++   + +++  T  +  +   L A+  I 
Sbjct: 102 GIVRLPNVDLLQEITDLMLAQRMYDANLTAFNAAKNMALRAL-EIG 146


>gi|238794003|ref|ZP_04637621.1| hypothetical protein yinte0001_21180 [Yersinia intermedia ATCC
          29909]
 gi|238726635|gb|EEQ18171.1| hypothetical protein yinte0001_21180 [Yersinia intermedia ATCC
          29909]
          Length = 555

 Score = 45.2 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 1  MQTSF-NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
          M  S  N  ++   A +  LSTV++N++N    G+      F++
Sbjct: 1  MSNSLMNTAMSGLSAAQYALSTVSNNITNFQVAGYNRQNTIFAQ 44


>gi|91791420|ref|YP_561071.1| putative flagellar basal body rod protein FlgC [Shewanella
           denitrificans OS217]
 gi|91713422|gb|ABE53348.1| putative flagellar basal body rod protein FlgC [Shewanella
           denitrificans OS217]
          Length = 127

 Score = 45.2 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 7/48 (14%), Positives = 22/48 (45%), Gaps = 1/48 (2%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           K+GF+   + +  +EM  +    + + +   + +  ++   +A+  I 
Sbjct: 80  KQGFIYMPDIDLAHEMVTLSSAKRAYEANIKVYNSYKEMSAKAL-EIG 126


>gi|329849966|ref|ZP_08264812.1| flagellar hook-associated protein FlgK [Asticcacaulis
          biprosthecum C19]
 gi|328841877|gb|EGF91447.1| flagellar hook-associated protein FlgK [Asticcacaulis
          biprosthecum C19]
          Length = 713

 Score = 45.2 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 10/32 (31%), Positives = 21/32 (65%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGF 34
          +  NIG++  +  +++L   +DN+SN +T G+
Sbjct: 5  SIMNIGVSGLMTAQEQLRITSDNISNVNTPGY 36


>gi|117621022|ref|YP_857346.1| flagellar basal-body rod protein FlgB [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117562429|gb|ABK39377.1| flagellar basal-body rod protein FlgB [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 132

 Score = 45.2 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 13/98 (13%), Positives = 32/98 (32%)

Query: 12  QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
                +R   ++ N++N DT GF+   + FS+ +   +      ++  +     L  +  
Sbjct: 16  LSVRSKRAEVLSSNIANADTPGFKARDINFSQALEEAQQQQGFGLATTSEKHFALQMDAP 75

Query: 72  SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109
                   L           ++  R   L     ++ +
Sbjct: 76  GVTQYRNPLQPDTGDGNTVDVQQERSEFLRNSLEYQTS 113


>gi|28869148|ref|NP_791767.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
          tomato str. DC3000]
 gi|213967575|ref|ZP_03395723.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
          tomato T1]
 gi|301385720|ref|ZP_07234138.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
          tomato Max13]
 gi|302060067|ref|ZP_07251608.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
          tomato K40]
 gi|302134826|ref|ZP_07260816.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
          tomato NCPPB 1108]
 gi|28852388|gb|AAO55462.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
          tomato str. DC3000]
 gi|213927876|gb|EEB61423.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
          tomato T1]
 gi|331017018|gb|EGH97074.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
          lachrymans str. M302278PT]
          Length = 686

 Score = 45.2 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 16/97 (16%), Positives = 34/97 (35%), Gaps = 1/97 (1%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           +  +IGL+   A    ++T+ +N +N DT G+   +V  +     I   +        +
Sbjct: 1  MSLISIGLSGINASSAAINTIGNNTANVDTAGYSRQQVM-TTASAQINIGLGVGYIGTGT 59

Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98
              + +    ++    +   AL  DA          
Sbjct: 60 TLSDVRRIYNGYLDAQLQTSTALSADAVAYSGQASKT 96


>gi|163789663|ref|ZP_02184101.1| Flagellar hook-associated protein [Carnobacterium sp. AT7]
 gi|159875195|gb|EDP69261.1| Flagellar hook-associated protein [Carnobacterium sp. AT7]
          Length = 361

 Score = 45.2 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 16/167 (9%), Positives = 38/167 (22%), Gaps = 10/167 (5%)

Query: 86  GDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEK 145
           G  +F L            +        +   +    +  +        Q        + 
Sbjct: 194 GTDFFDLSETVDGNYAASIQVNKEILNDVSKINAGKNIETVVGGDGTRAQAIAALQNTKL 253

Query: 146 GEISQKGKVIATMGLYSVDM-SQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFL----E 200
              +   ++       ++D    G         S        +    +   +G L    E
Sbjct: 254 DYSTNPLELKYNETTMTIDNQPGGSTVAGAYNDSVTQMGIVKQQSDNMVDSQGSLVSLLE 313

Query: 201 D-----SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
                 S  +   E+   I     F + + +I    + +   I    
Sbjct: 314 ARRDSVSGVSINEEVTNTITYQSAFEANSRIISVVSEMLDTLINRTG 360


>gi|320329359|gb|EFW85352.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
          glycinea str. race 4]
          Length = 686

 Score = 45.2 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 35/97 (36%), Gaps = 1/97 (1%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           +  +IGL+   A    ++T+ +N +N DT G+   +V  +     I   +        +
Sbjct: 1  MSLISIGLSGINASSAAINTIGNNTANVDTAGYSRQQVM-TTASAQINIGLGVGYIGTGT 59

Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98
              + +   S++    +   AL  DA          
Sbjct: 60 TLSDVRRIYNSYLDAQLQTSTALSADAVAYSGQASKT 96


>gi|302878282|ref|YP_003846846.1| flagellar hook-associated protein FlgK [Gallionella
          capsiferriformans ES-2]
 gi|302581071|gb|ADL55082.1| flagellar hook-associated protein FlgK [Gallionella
          capsiferriformans ES-2]
          Length = 646

 Score = 45.2 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 1/40 (2%)

Query: 1  MQTSFNIG-LAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39
          M ++     L+   A +  LST   N++N +T G+    +
Sbjct: 1  MGSNIYSASLSGMNAAQFALSTTQHNIANANTPGYSRQTM 40



 Score = 35.2 bits (79), Expect = 8.3,   Method: Composition-based stats.
 Identities = 12/158 (7%), Positives = 31/158 (19%), Gaps = 6/158 (3%)

Query: 82  FALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFN 141
            A+ G   +    P                G + +              + +        
Sbjct: 492 PAVAGAVAYTEGVPITYNGWTATITGTPAAGDVFNVKSNTTATGDNRNALLMAALQTQNL 551

Query: 142 VGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLED 201
           +   G +                 S G   +E    S        + ++      G    
Sbjct: 552 LASSGGVGANATTNLQGAYSQFVGSIGAKTQELLVTSTAQDAMVTQTVATQQSVSG---- 607

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              N   E   ++   + + +    +          + 
Sbjct: 608 --VNLDEEAANLLRYQRAYQAAAKAMQIANTMFDSLLT 643


>gi|296103614|ref|YP_003613760.1| Flagellar basal-body rod protein FlgB [Enterobacter cloacae
          subsp. cloacae ATCC 13047]
 gi|295058073|gb|ADF62811.1| Flagellar basal-body rod protein FlgB [Enterobacter cloacae
          subsp. cloacae ATCC 13047]
          Length = 136

 Score = 45.2 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 26/68 (38%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A   L +R   +A N++N DT G++   + F++ + A   +     S V+          
Sbjct: 14 ALGLLSRRQDILASNIANADTPGYKARDIDFTQQLKAAMENNAMAKSPVSLSLTSNKHIE 73

Query: 71 GSFISTGT 78
          G       
Sbjct: 74 GKARPFDD 81


>gi|94495414|ref|ZP_01301994.1| flagellar proximal rod protein [Sphingomonas sp. SKA58]
 gi|94424802|gb|EAT09823.1| flagellar proximal rod protein [Sphingomonas sp. SKA58]
          Length = 123

 Score = 45.2 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 26/72 (36%), Gaps = 2/72 (2%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV--GAIKNDIDQKISFVASGKEYLSK 68
          A     QRLS +A N++N  T G++   + F   +     ++          + ++ +  
Sbjct: 14 ALALRSQRLSLLASNIANASTPGYKARDIDFEAALKEATAQSSGATSTDMGKAVEDAMGY 73

Query: 69 EVGSFISTGTEL 80
           V    S     
Sbjct: 74 RVPLQPSLDGNT 85


>gi|227876736|ref|ZP_03994845.1| flagellar basal body rod protein [Mobiluncus mulieris ATCC 35243]
 gi|306817683|ref|ZP_07451425.1| flagella basal body rod protein [Mobiluncus mulieris ATCC 35239]
 gi|227842633|gb|EEJ52833.1| flagellar basal body rod protein [Mobiluncus mulieris ATCC 35243]
 gi|304649497|gb|EFM46780.1| flagella basal body rod protein [Mobiluncus mulieris ATCC 35239]
          Length = 106

 Score = 45.2 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 27/65 (41%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69
           A   L  R   +ADN++N  T GF   KV+F + +       + + + +A+ +      
Sbjct: 3  TALDGLSMRQRVIADNIANIQTPGFLAGKVRFEDELARATRFGNPQSAHIATARSLEPTR 62

Query: 70 VGSFI 74
          +    
Sbjct: 63 IDGNN 67


>gi|163760754|ref|ZP_02167834.1| probable flagellar basal body rod protein [Hoeflea phototrophica
          DFL-43]
 gi|162282076|gb|EDQ32367.1| probable flagellar basal body rod protein [Hoeflea phototrophica
          DFL-43]
          Length = 112

 Score = 45.2 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 24/58 (41%), Gaps = 1/58 (1%)

Query: 1  MQTSF-NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS 57
          M +S  N   +   A  +R+  +A N++N DT  +    V+     G     + ++  
Sbjct: 1  MISSIINTAFSGMAAQSKRMDAIASNVANVDTPDYNRKTVEMVTTAGGGVRAVPREAP 58


>gi|316932833|ref|YP_004107815.1| flagellar basal body rod protein [Rhodopseudomonas palustris
          DX-1]
 gi|315600547|gb|ADU43082.1| flagellar basal body rod protein [Rhodopseudomonas palustris
          DX-1]
          Length = 136

 Score = 45.2 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 26/72 (36%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69
                +QR   +ADN++N+DT GF+ + +       + +      +  +   +      
Sbjct: 14 TRMQWHQQRQRVLADNIANSDTPGFKPLDLVAPTFDPSGRPTAGSPVGSLPMMRTSAVHI 73

Query: 70 VGSFISTGTELD 81
            S  +     D
Sbjct: 74 APSGGTESFSQD 85


>gi|149203101|ref|ZP_01880072.1| flagellar hook-associated protein K [Roseovarius sp. TM1035]
 gi|149143647|gb|EDM31683.1| flagellar hook-associated protein K [Roseovarius sp. TM1035]
          Length = 482

 Score = 45.2 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 7/32 (21%), Positives = 17/32 (53%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGF 34
          ++ +  L+   A  + +  ++ N++N  T GF
Sbjct: 5  SALSSALSGLAANTRAVDVISGNLANALTEGF 36



 Score = 36.8 bits (83), Expect = 2.6,   Method: Composition-based stats.
 Identities = 6/36 (16%), Positives = 17/36 (47%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +S  E+ +++ + Q F +   +I   +  +   +R
Sbjct: 446 VDSDAELQRLLLVEQAFGANARMIQTIDDLLDTLLR 481


>gi|91776315|ref|YP_546071.1| flagellar hook-associated protein FlgK [Methylobacillus
          flagellatus KT]
 gi|91710302|gb|ABE50230.1| Flagellar hook-associated protein [Methylobacillus flagellatus
          KT]
          Length = 645

 Score = 45.2 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 25/83 (30%), Gaps = 1/83 (1%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M   FNIG  A  A +  +ST   N++N +T G+ + +V       A         +   
Sbjct: 1  MSNIFNIGKTALNAAQVGISTTGHNIANANTEGY-SRQVIVQSAGQAQAWGFGYLGNGTQ 59

Query: 61 SGKEYLSKEVGSFISTGTELDFA 83
                                A
Sbjct: 60 VDTVKRVYNELLSRQISNSQSIA 82



 Score = 36.0 bits (81), Expect = 4.6,   Method: Composition-based stats.
 Identities = 6/45 (13%), Positives = 15/45 (33%), Gaps = 3/45 (6%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           ++G   +S  N   E   +I   Q + +   ++          + 
Sbjct: 602 QQG---ESGVNLDEEAVNLIRYQQAYQAAGKVMQIASTLFETVLS 643


>gi|121997322|ref|YP_001002109.1| flagellar basal-body rod protein FlgB [Halorhodospira halophila
          SL1]
 gi|121588727|gb|ABM61307.1| flagellar basal-body rod protein FlgB [Halorhodospira halophila
          SL1]
          Length = 135

 Score = 45.2 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 22/71 (30%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     +R   +A N++N DT G++   + F E +        Q +   +          
Sbjct: 15 AMRLRGERNELLASNIANADTPGYKARDMDFREAMRQASEPQPQPLQATSPQHVQPPPSS 74

Query: 71 GSFISTGTELD 81
                   L 
Sbjct: 75 SMAAGDPKSLY 85


>gi|315635632|ref|ZP_07890895.1| flagellar hook-associated protein FlgK [Arcobacter butzleri JV22]
 gi|315479929|gb|EFU70599.1| flagellar hook-associated protein FlgK [Arcobacter butzleri JV22]
          Length = 636

 Score = 45.2 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 31/78 (39%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
          FN+      A    + TV++N++N DT G++      SE+     +   + ++     + 
Sbjct: 7  FNVAQTGLNASRYGIETVSNNIANKDTDGYKKRVTDLSEIGQMGSSITGRGVNVDGVSRV 66

Query: 65 YLSKEVGSFISTGTELDF 82
                 ++    T+  +
Sbjct: 67 TSQYLYDNYTKEYTKTSY 84



 Score = 40.6 bits (93), Expect = 0.20,   Method: Composition-based stats.
 Identities = 4/35 (11%), Positives = 15/35 (42%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            +   EM  ++ L   +++   +I   ++ +   +
Sbjct: 598 VDEDDEMVNLMKLQAAYSANAQMITAVDEMIKVIL 632


>gi|167905087|ref|ZP_02492292.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
           NCTC 13177]
          Length = 134

 Score = 45.2 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 16/100 (16%), Positives = 30/100 (30%), Gaps = 4/100 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
             +       A   +   +A N++N DT G+R   + F   +     D        A   
Sbjct: 20  GLHPAALKLRAERTK--VIASNLANLDTPGYRARDLDFKRSLAEAGGDGAHARPGDALTG 77

Query: 64  EYLSKEVGSFI--STGTELDFALEGDAWFALESPRGIILT 101
                    +     G  ++  +E  A+        + LT
Sbjct: 78  GVTLGYRVPYQAAQDGNTVELGIEQAAFAQNAVDFQMSLT 117


>gi|313681828|ref|YP_004059566.1| flagellar hook-associated protein flgk [Sulfuricurvum kujiense
          DSM 16994]
 gi|313154688|gb|ADR33366.1| flagellar hook-associated protein FlgK [Sulfuricurvum kujiense
          DSM 16994]
          Length = 615

 Score = 45.2 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 25/67 (37%), Gaps = 1/67 (1%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
           + +IG +   A +  + T   N+SN +T G+   +V  +     +  D  Q+       
Sbjct: 6  NALHIGYSGLNAAQIGIDTTGHNISNAETEGYTRQRVV-TAAAAPLGVDPGQRGGGTQVT 64

Query: 63 KEYLSKE 69
                +
Sbjct: 65 DITRIFD 71



 Score = 42.5 bits (98), Expect = 0.044,   Method: Composition-based stats.
 Identities = 10/72 (13%), Positives = 23/72 (31%)

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
              V R  +  +  I           ++K+     S  +   EM  +I     + +   +
Sbjct: 540 DNLVTRVGTRTNSAIVSNDSITAQFNSIKQEQDSISKVSIDEEMANLIRYQTSYGAAAKV 599

Query: 227 IDENEKSMLEAI 238
           I   ++ M   +
Sbjct: 600 ITTIDQMMTTLL 611


>gi|126462486|ref|YP_001043600.1| flagellar basal-body rod protein FlgC [Rhodobacter sphaeroides
          ATCC 17029]
 gi|126104150|gb|ABN76828.1| flagellar basal-body rod protein FlgC [Rhodobacter sphaeroides
          ATCC 17029]
          Length = 138

 Score = 45.2 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 30/87 (34%), Gaps = 6/87 (6%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDT------VGFRTIKVKFSEVVGAIKNDIDQK 55
           + F++G  A  A   R++TVA N++N  T        FR ++  F              
Sbjct: 5  DSVFDVGARALSAQMVRMNTVASNLANAGTVSDKAETAFRPLRPVFETSYADAVGRTGLS 64

Query: 56 ISFVASGKEYLSKEVGSFISTGTELDF 82
           + VA       +    +     + D 
Sbjct: 65 TTDVAGVVSLDREPARVYRPDHPQADP 91



 Score = 35.6 bits (80), Expect = 6.0,   Method: Composition-based stats.
 Identities = 4/36 (11%), Positives = 13/36 (36%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +   EM +M+  ++++ +    +      M     
Sbjct: 100 VSVDEEMVEMMEASRQYQNTLEAVSTLRSLMARTAS 135


>gi|326392863|ref|ZP_08214093.1| protein of unknown function DUF1078 domain protein
           [Thermoanaerobacter ethanolicus JW 200]
 gi|325991095|gb|EGD49857.1| protein of unknown function DUF1078 domain protein
           [Thermoanaerobacter ethanolicus JW 200]
          Length = 89

 Score = 45.2 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 6/41 (14%), Positives = 16/41 (39%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  +   EM  M+   + + +   +I   ++ +   I  + 
Sbjct: 45  SGVSLDEEMTNMLKYQKSYVASARVITVMDELLDTLINRMG 85


>gi|296282282|ref|ZP_06860280.1| flagellar basal-body rod protein FlgB [Citromicrobium
          bathyomarinum JL354]
          Length = 115

 Score = 45.2 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 28/77 (36%), Gaps = 1/77 (1%)

Query: 1  MQTSFN-IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFV 59
          M      I  AA     QR++ +  N++N  T G++   + F   + A     + + +  
Sbjct: 1  MNEGLFGIHGAALEIRAQRMAVLGSNIANAGTPGYKARDIDFGAALQARLAGSESEGAAQ 60

Query: 60 ASGKEYLSKEVGSFIST 76
           +    +        +T
Sbjct: 61 RATVYRIPTMASLDGNT 77


>gi|262276420|ref|ZP_06054229.1| flagellar basal-body rod protein FlgB [Grimontia hollisae CIP
          101886]
 gi|262220228|gb|EEY71544.1| flagellar basal-body rod protein FlgB [Grimontia hollisae CIP
          101886]
          Length = 131

 Score = 45.2 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 21/37 (56%)

Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
          QR  T+A N++N +T G++   V F + + A  +  +
Sbjct: 21 QRAETLASNLANANTPGYKAQDVDFEQALQAATSGAN 57


>gi|148256779|ref|YP_001241364.1| flagellar basal body rod protein FlgC [Bradyrhizobium sp. BTAi1]
 gi|146408952|gb|ABQ37458.1| flagellar basal-body rod protein FlgC (cell-proximal rod protein)
           [Bradyrhizobium sp. BTAi1]
          Length = 141

 Score = 45.2 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 7/49 (14%), Positives = 19/49 (38%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
             G ++  N N + EM  M    + + +   +I    + +   +  + +
Sbjct: 93  ASGNVKYPNVNPLVEMTDMRDAQRSYEANLNIIGATRRMIQRTLDILKT 141



 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 10/55 (18%), Positives = 22/55 (40%), Gaps = 7/55 (12%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKN 50
           S +I  +   A   R+  +++N++N D+         +R     FS  +    +
Sbjct: 10 RSMSIATSGLRAQAGRMRVISENIANADSTAAKAGGDPYRRKVPTFSSALDRALD 64


>gi|167725928|ref|ZP_02409164.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           DM98]
 gi|167905088|ref|ZP_02492293.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           NCTC 13177]
          Length = 125

 Score = 45.2 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 19/42 (45%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G +   N N + EM  M+  ++ +++   ++       LE +
Sbjct: 80  GNVLYPNVNPVEEMTDMLSASRAYSTNVEVLGRVNGMQLELL 121



 Score = 36.8 bits (83), Expect = 2.5,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 34/94 (36%), Gaps = 7/94 (7%)

Query: 12 QLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65
            A   RL+T+A N++N D+        +R  K  F+ +         +  +        
Sbjct: 1  MSAQTVRLNTIASNLANADSASGTEDATYRARKPVFASIFQLDAQGEPRGAAVQVLDVVK 60

Query: 66 LSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
           ++ +      G  L  A EG+  +   +P   +
Sbjct: 61 STEPLRKVHQPGHPLADA-EGNVLYPNVNPVEEM 93


>gi|313610105|gb|EFR85430.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes FSL
           F2-208]
          Length = 133

 Score = 45.2 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 11/104 (10%), Positives = 29/104 (27%)

Query: 12  QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
              L+     V++N++N +T  F+  +  F E +G+      Q     A      + +  
Sbjct: 12  LNYLQTANQVVSNNIANANTPNFKASEASFEESLGSSLRASGQNSIESAGNLTKTNTKHL 71

Query: 72  SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115
           +                    +     + +        +    +
Sbjct: 72  AGTDIDETNAKVTTKSGSINEDGNNVNVTSEMISLTKNNQMYAL 115


>gi|254853086|ref|ZP_05242434.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes FSL
           R2-503]
 gi|255521220|ref|ZP_05388457.1| flagellar basal body rod protein FlgB [Listeria monocytogenes FSL
           J1-175]
 gi|300764523|ref|ZP_07074516.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes FSL
           N1-017]
 gi|258606435|gb|EEW19043.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes FSL
           R2-503]
 gi|300514877|gb|EFK41931.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes FSL
           N1-017]
          Length = 133

 Score = 45.2 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 11/104 (10%), Positives = 30/104 (28%)

Query: 12  QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
              L+     V++N++N +T  F+  +  F E +G+      Q  +  A      + +  
Sbjct: 12  LNYLQTANQVVSNNIANANTPNFKASEASFEESLGSSLRASGQNSTESAGNLTKTNTKHL 71

Query: 72  SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115
           +                    +     + +        +    +
Sbjct: 72  AGTEIDETNAKVTTKSGSINEDGNNVNVTSEMISLTKNNQMYAL 115


>gi|58039961|ref|YP_191925.1| flagellar basal body rod protein FlgC [Gluconobacter oxydans
          621H]
 gi|58002375|gb|AAW61269.1| Flagellar basal-body rod protein FlgC [Gluconobacter oxydans
          621H]
          Length = 135

 Score = 45.2 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 25/77 (32%), Gaps = 7/77 (9%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQKISFV 59
          I  +   A  QRL  VA+N++N DT G       +R   + F+E V          +  V
Sbjct: 9  ISASGMDAQAQRLRIVAENLANQDTTGSQPGADPYRRKTITFAEHVDDETGASTVDVQNV 68

Query: 60 ASGKEYLSKEVGSFIST 76
                           
Sbjct: 69 GQDMSDFDTRYDPSHPA 85



 Score = 43.3 bits (100), Expect = 0.030,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 18/42 (42%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G+++ SN +SM EM  M    + + +    +      +   +
Sbjct: 90  GYVKVSNVDSMTEMMDMREAERSYEANLNALSSTRTMLSRTL 131


>gi|91976172|ref|YP_568831.1| flagellar basal body rod protein FlgC [Rhodopseudomonas palustris
           BisB5]
 gi|91682628|gb|ABE38930.1| flagellar basal-body rod protein FlgC [Rhodopseudomonas palustris
           BisB5]
          Length = 141

 Score = 45.2 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 8/49 (16%), Positives = 21/49 (42%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
             G ++  N NS+ EM  M +  + + +   +I    + +   +  + +
Sbjct: 93  AAGNVKYPNVNSVIEMTDMRNAQRSYEANLNVISATRRMIQRTLDILKA 141



 Score = 41.4 bits (95), Expect = 0.12,   Method: Composition-based stats.
 Identities = 10/55 (18%), Positives = 21/55 (38%), Gaps = 7/55 (12%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSN----TDTVG---FRTIKVKFSEVVGAIKN 50
           S  I  +   A   R+  +++N++N      T G   +R     F+  +    +
Sbjct: 10 RSMGIATSGLRAQAGRMRVISENIANAESTAQTAGGDPYRRKVPTFTSALDRSLD 64


>gi|325274805|ref|ZP_08140832.1| flagellar basal body rod protein FlgB [Pseudomonas sp. TJI-51]
 gi|324100050|gb|EGB97869.1| flagellar basal body rod protein FlgB [Pseudomonas sp. TJI-51]
          Length = 136

 Score = 45.2 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 26/64 (40%)

Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76
          QR   +A+N++N DT  ++   + FS V+ A  +        +        +  G  ++ 
Sbjct: 21 QRAEVLANNIANADTPNYKARDMDFSSVLAAETSKQQSGRFAMERTNSRHIEAEGLAVAA 80

Query: 77 GTEL 80
             L
Sbjct: 81 DDTL 84


>gi|255022491|ref|ZP_05294477.1| flagellar basal body rod protein FlgB [Listeria monocytogenes FSL
          J1-208]
          Length = 133

 Score = 45.2 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 20/45 (44%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56
             L+     V++N++N +T  F+  +  F E +G+      Q  
Sbjct: 12 LNYLQTANQVVSNNIANANTPNFKASEASFEESLGSSLRASGQNS 56


>gi|51597631|ref|YP_071822.1| flagellar hook-associated protein FlgK [Yersinia
          pseudotuberculosis IP 32953]
 gi|186896765|ref|YP_001873877.1| flagellar hook-associated protein FlgK [Yersinia
          pseudotuberculosis PB1/+]
 gi|51590913|emb|CAH22569.1| putative flagellar hook-associated protein [Yersinia
          pseudotuberculosis IP 32953]
 gi|186699791|gb|ACC90420.1| flagellar hook-associated protein FlgK [Yersinia
          pseudotuberculosis PB1/+]
          Length = 453

 Score = 45.2 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 7/53 (13%), Positives = 20/53 (37%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54
                  +   A +  L+  + N++N  T G+   + + S +    +  ++ 
Sbjct: 1  MNFIRTAFSGMQATQAHLNATSMNIANMHTPGYSRQRAEQSAIGADGQGGVNA 53



 Score = 38.3 bits (87), Expect = 0.85,   Method: Composition-based stats.
 Identities = 6/37 (16%), Positives = 15/37 (40%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N+  E   ++   + + S   +I   +K   + +
Sbjct: 414 SGVNNDEEAMNLMEYQRAYQSNMKVIATGDKLFSDLL 450


>gi|222147569|ref|YP_002548526.1| flagellar basal body rod protein FlgC [Agrobacterium vitis S4]
 gi|221734557|gb|ACM35520.1| flagellar basal-body rod protein [Agrobacterium vitis S4]
          Length = 145

 Score = 45.2 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 12/101 (11%), Positives = 31/101 (30%)

Query: 143 GEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDS 202
              G    + K I              V+ +  G   +      +  +     +G+++  
Sbjct: 43  DTPGANPYRRKTITFGSEMDRATGTEIVKVKKLGFDKSNFTEEYDPSNPAADAKGYVKMP 102

Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           N N + EM  M    + + +    + +    +   +  + S
Sbjct: 103 NVNVLIEMADMREANRTYEANLQSVKQTRDLITSTLDLLKS 143



 Score = 42.9 bits (99), Expect = 0.036,   Method: Composition-based stats.
 Identities = 14/105 (13%), Positives = 33/105 (31%), Gaps = 8/105 (7%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKF-SEVVGAIKNDIDQ 54
           ++  I  +       RL  V++N++N  + G       +R   + F SE+  A   +I +
Sbjct: 12  SALKIAGSGLDVQSTRLRIVSENIANAQSTGDTPGANPYRRKTITFGSEMDRATGTEIVK 71

Query: 55  KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
                     +  +   S  +   +    +         +     
Sbjct: 72  VKKLGFDKSNFTEEYDPSNPAADAKGYVKMPNVNVLIEMADMREA 116


>gi|160896073|ref|YP_001561655.1| flagellar hook-associated protein FlgK [Delftia acidovorans
          SPH-1]
 gi|160361657|gb|ABX33270.1| flagellar hook-associated protein FlgK [Delftia acidovorans
          SPH-1]
          Length = 642

 Score = 45.2 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 16/40 (40%)

Query: 13 LALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          +A +  L T   N++N +T G+    V F    G      
Sbjct: 1  MANQIALQTTGHNIANVNTAGYSRQSVAFQTSPGQNMGSG 40



 Score = 36.4 bits (82), Expect = 3.9,   Method: Composition-based stats.
 Identities = 4/41 (9%), Positives = 15/41 (36%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E  +++   Q + +   ++   +      ++ + 
Sbjct: 601 SGVNLDEEAAKLLQYQQSYQASAKMLQVAQSIFDSVLQTVG 641


>gi|114565761|ref|YP_752915.1| flagellar hook-associated protein-like protein [Syntrophomonas
           wolfei subsp. wolfei str. Goettingen]
 gi|114336696|gb|ABI67544.1| Flagellar hook-associated protein-like protein [Syntrophomonas
           wolfei subsp. wolfei str. Goettingen]
          Length = 838

 Score = 45.2 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 16/41 (39%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  +   EM  MI     FN+ +  I   ++ +   I  + 
Sbjct: 794 SGVSLDEEMTNMIKFQHAFNAASRFITGIDEGLEVIINRMG 834



 Score = 43.3 bits (100), Expect = 0.029,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 22/62 (35%), Gaps = 6/62 (9%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK------FSEVVGAIKNDIDQKIS 57
             IG  + L  +  L+    N++N +T GF            F   +    N + Q  +
Sbjct: 6  GLEIGKRSVLMHQTALNITGHNIANANTPGFARQAPSIVTTSPFHAPMLNNANRVGQLGT 65

Query: 58 FV 59
           V
Sbjct: 66 GV 67


>gi|319787124|ref|YP_004146599.1| flagellar basal-body rod protein FlgB [Pseudoxanthomonas
          suwonensis 11-1]
 gi|317465636|gb|ADV27368.1| flagellar basal-body rod protein FlgB [Pseudoxanthomonas
          suwonensis 11-1]
          Length = 139

 Score = 45.2 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 1/63 (1%)

Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVV-GAIKNDIDQKISFVASGKEYLSKEVGSFI 74
          EQR+  +A N++N DT G++   + F+  +  A ++      +            +   I
Sbjct: 20 EQRMKLIASNLANADTPGYKAQDLDFNAALDAATRSRTGGVANGPGVPAATHESHLQDAI 79

Query: 75 STG 77
          +TG
Sbjct: 80 ATG 82


>gi|225552255|ref|ZP_03773195.1| flagellar basal-body rod protein FlgB [Borrelia sp. SV1]
 gi|225371253|gb|EEH00683.1| flagellar basal-body rod protein FlgB [Borrelia sp. SV1]
          Length = 135

 Score = 45.2 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 11/32 (34%), Positives = 17/32 (53%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
             L  R S ++DN++N DT  F+  K+ F  
Sbjct: 15 LDVLSLRQSVISDNIANVDTPNFKRSKISFES 46


>gi|225552251|ref|ZP_03773191.1| flagellar hook-associated protein FlgK [Borrelia sp. SV1]
 gi|225371249|gb|EEH00679.1| flagellar hook-associated protein FlgK [Borrelia sp. SV1]
          Length = 627

 Score = 45.2 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 16/41 (39%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E+  MI   Q F + +  I  + + +   I  + 
Sbjct: 586 SGVNKDEELANMIEFQQAFIAASKFITVSVELIDTVINKMG 626



 Score = 36.4 bits (82), Expect = 3.5,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 23/57 (40%), Gaps = 3/57 (5%)

Query: 1  MQT---SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54
          M +      IG  +  A +  ++TV  N+SN    G+   +V     +      +++
Sbjct: 1  MDSTFSGIEIGKRSLFAHKDAMNTVGHNLSNATKPGYSRQRVTMKTAIPLYAPQLNR 57


>gi|307720252|ref|YP_003891392.1| flagellar basal-body rod protein FlgB [Sulfurimonas autotrophica
           DSM 16294]
 gi|306978345|gb|ADN08380.1| flagellar basal-body rod protein FlgB [Sulfurimonas autotrophica
           DSM 16294]
          Length = 143

 Score = 45.2 bits (105), Expect = 0.009,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 28/81 (34%)

Query: 18  RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTG 77
           R   ++ N++N DT  ++   + F + + A KN++ Q  +      +  S  +       
Sbjct: 22  RQDMISSNIANADTPYYKPRDISFEDALIAKKNELYQDNAHQLKMAQTNSGHLQPKAQAS 81

Query: 78  TELDFALEGDAWFALESPRGI 98
                    D   A      +
Sbjct: 82  QIKPTLYFRDGHMARNDGNSV 102


>gi|313624694|gb|EFR94651.1| flagellar basal-body rod protein FlgB [Listeria innocua FSL
          J1-023]
          Length = 133

 Score = 45.2 bits (105), Expect = 0.009,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 18/44 (40%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK 55
             L+     V++N++N +T  F+  +  F E  GA        
Sbjct: 12 LNYLQTANQVVSNNIANANTPNFKASEASFEESFGASLRSSGSN 55


>gi|254458686|ref|ZP_05072110.1| flagellar basal-body rod protein FlgC [Campylobacterales bacterium
           GD 1]
 gi|207084452|gb|EDZ61740.1| flagellar basal-body rod protein FlgC [Campylobacterales bacterium
           GD 1]
          Length = 163

 Score = 45.2 bits (105), Expect = 0.009,   Method: Composition-based stats.
 Identities = 8/45 (17%), Positives = 20/45 (44%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           G++   N N + EM  ++  T+ + +     + ++     AI  +
Sbjct: 118 GYVAYPNINPVIEMADLVEATRSYQANVAAFESSKNMANSAISLL 162



 Score = 41.0 bits (94), Expect = 0.14,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 6/49 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44
           +SF+I      A   R++T++ N++N  T     G  +R  +V F  +
Sbjct: 4  LSSFDISGYGLSAQRVRVNTISQNIANAQTTRTEEGGPYRRKEVVFKAI 52


>gi|190574265|ref|YP_001972110.1| flagellar basal body rod protein FlgC [Stenotrophomonas maltophilia
           K279a]
 gi|190012187|emb|CAQ45810.1| putative flagellar basal-body rod protein FlgC [Stenotrophomonas
           maltophilia K279a]
          Length = 135

 Score = 45.2 bits (105), Expect = 0.009,   Method: Composition-based stats.
 Identities = 4/43 (9%), Positives = 20/43 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   + + + +M  +I  ++ + +   ++   ++  L  + 
Sbjct: 90  GYIYQPDVDPVAQMVNLISTSRNYQAGVEMLTTAKELALATLT 132



 Score = 39.5 bits (90), Expect = 0.41,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 6/56 (10%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQ 54
          F+I  +A  A   R+ST+A N+SN DTV       ++ ++  F  V      +I  
Sbjct: 7  FDIAGSALQAQSVRMSTIASNLSNADTVAGSADAVYKPLEPIFQAVTSKNDPNITS 62


>gi|254182895|ref|ZP_04889488.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
           1655]
 gi|184213429|gb|EDU10472.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
           1655]
          Length = 131

 Score = 45.2 bits (105), Expect = 0.009,   Method: Composition-based stats.
 Identities = 16/100 (16%), Positives = 30/100 (30%), Gaps = 4/100 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
             +       A   +   +A N++N DT G+R   + F   +     D        A   
Sbjct: 17  GLHPAALKLRAERTK--VIASNLANLDTPGYRARDLDFKRSLAEAGGDGAHARPGDALTG 74

Query: 64  EYLSKEVGSFI--STGTELDFALEGDAWFALESPRGIILT 101
                    +     G  ++  +E  A+        + LT
Sbjct: 75  GVTLGYRVPYQAAQDGNTVELGIEQAAFAQNAVDFQMSLT 114


>gi|229166585|ref|ZP_04294337.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH621]
 gi|228616839|gb|EEK73912.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH621]
          Length = 137

 Score = 45.2 bits (105), Expect = 0.009,   Method: Composition-based stats.
 Identities = 6/33 (18%), Positives = 14/33 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG 33
          M  + N   +      + +   ++N+ N +T G
Sbjct: 1  MFQAINASGSGLTTARKWMEVTSNNIVNVNTTG 33



 Score = 43.7 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 22/40 (55%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           G++   N +   EM  ++   + + + T++++ N+K + +
Sbjct: 91  GYVRYPNIDVTAEMTNVMVAQKMYEANTSVLNANKKMLDK 130


>gi|303326604|ref|ZP_07357046.1| flagellar basal-body rod protein FlgC [Desulfovibrio sp. 3_1_syn3]
 gi|302862592|gb|EFL85524.1| flagellar basal-body rod protein FlgC [Desulfovibrio sp. 3_1_syn3]
          Length = 146

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 7/46 (15%), Positives = 21/46 (45%), Gaps = 1/46 (2%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G++   + N + EM  ++   + + +  T ++  +    +A+  I 
Sbjct: 100 GYVSYPDINVVEEMANLMSAQRNYEANVTTVEAIKGMYNKAL-EIG 144



 Score = 40.2 bits (92), Expect = 0.26,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 19/34 (55%), Gaps = 2/34 (5%)

Query: 1  MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTV 32
          M   T+ +IG +   A   R++T++ N++N  T 
Sbjct: 1  MDFLTALDIGASGLTADRTRINTISMNLANAKTT 34


>gi|217965192|ref|YP_002350870.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes
          HCC23]
 gi|217334462|gb|ACK40256.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes
          HCC23]
 gi|307570249|emb|CAR83428.1| flagellar basal-body rod protein [Listeria monocytogenes L99]
          Length = 133

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 19/45 (42%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56
             L+     V++N++N +T  F+  +  F E  G+      Q  
Sbjct: 12 LNYLQTANQVVSNNIANANTPNFKASEASFEESFGSSLRASGQNS 56


>gi|254932010|ref|ZP_05265369.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes
           HPB2262]
 gi|290894007|ref|ZP_06556982.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes FSL
           J2-071]
 gi|290556453|gb|EFD89992.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes FSL
           J2-071]
 gi|293583562|gb|EFF95594.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes
           HPB2262]
 gi|332311134|gb|EGJ24229.1| Flagellar basal-body rod protein FlgB [Listeria monocytogenes str.
           Scott A]
          Length = 133

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 11/104 (10%), Positives = 28/104 (26%)

Query: 12  QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
              L+     V++N++N +T  F+  +  F E  G+      Q     A      + +  
Sbjct: 12  LNYLQTANQVVSNNIANANTPNFKASEASFEESFGSSLRASGQNSIESAGNLTKTNTKHL 71

Query: 72  SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115
           +                    +     + +        +    +
Sbjct: 72  AGTDIDETNAKVTTKSGSINEDGNNVNVTSEMISLTKNNQMYAL 115


>gi|118588701|ref|ZP_01546109.1| flagellar basal-body rod protein B [Stappia aggregata IAM 12614]
 gi|118438687|gb|EAV45320.1| flagellar basal-body rod protein B [Stappia aggregata IAM 12614]
          Length = 134

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 15/87 (17%), Positives = 30/87 (34%), Gaps = 4/87 (4%)

Query: 5  FNIGL-AAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDIDQKISFVA 60
              L +     + R S +A N++N DT G+    V    F + +G    ++    +   
Sbjct: 8  LFQALKSKMQWHQTRQSVLAQNIANADTPGYMARDVKEYSFKDHIGRQSLNLSTDTTASG 67

Query: 61 SGKEYLSKEVGSFISTGTELDFALEGD 87
            +  L     + I      +    G+
Sbjct: 68 HIRGSLGATDKAKIEEDDTFEVTPSGN 94


>gi|15887900|ref|NP_353581.1| flagellar basal body rod protein FlgC [Agrobacterium tumefaciens
           str. C58]
 gi|20141427|sp|Q44336|FLGC_AGRT5 RecName: Full=Flagellar basal-body rod protein flgC
 gi|15155492|gb|AAK86366.1| flagellar basal-body rod protein [Agrobacterium tumefaciens str.
           C58]
          Length = 139

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 9/68 (13%), Positives = 24/68 (35%)

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
           G+         +  +      G ++  N N + EM  M    + +++   +I +    + 
Sbjct: 70  GVDRGDFVHEYDPGNPAADTNGMVKMPNVNVLIEMADMREANRSYDANLQVIRQTRDLVA 129

Query: 236 EAIRNIAS 243
             I  + +
Sbjct: 130 STIDLLKA 137



 Score = 40.6 bits (93), Expect = 0.18,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 20/51 (39%), Gaps = 7/51 (13%)

Query: 7  IGLAAQLALEQRLSTVADNMSNT----DTVG---FRTIKVKFSEVVGAIKN 50
          I  +       RL  V++N++N     DT G   +R   V F   +  +  
Sbjct: 10 IAGSGLEVQSTRLRIVSENIANARSTGDTPGADPYRRKTVTFGSELDHVSG 60


>gi|260431757|ref|ZP_05785728.1| flagellar hook-associated protein FlgK [Silicibacter
          lacuscaerulensis ITI-1157]
 gi|260415585|gb|EEX08844.1| flagellar hook-associated protein FlgK [Silicibacter
          lacuscaerulensis ITI-1157]
          Length = 483

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 14/88 (15%), Positives = 31/88 (35%), Gaps = 3/88 (3%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M T+ N  L    A  +  + V+ N++N  T G+    +   E+  +  +    ++  V 
Sbjct: 3  MSTALNNALGGLSAASRGAAVVSGNIANALTPGYAKRTL---ELATSQISGNGVQVVGVT 59

Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDA 88
             + +             L+ A+    
Sbjct: 60 RHHDPVLAANLRAADADLALNSAIADFH 87



 Score = 37.5 bits (85), Expect = 1.5,   Method: Composition-based stats.
 Identities = 11/84 (13%), Positives = 32/84 (38%), Gaps = 1/84 (1%)

Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIH 215
            T  L + ++S+  + +  +                  +++   E    +S  E+ +M+ 
Sbjct: 400 GTGSLRAAELSEALLSKAGANAHTAQSRMTFAASLHQQMEQLVAEQG-VDSDAELQRMMQ 458

Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239
           + Q + +   +I   ++ M   +R
Sbjct: 459 IEQAYAANARIISVVDELMEMLLR 482


>gi|238916199|ref|YP_002929716.1| flagellar hook-associated protein 1 FlgK [Eubacterium eligens ATCC
           27750]
 gi|238871559|gb|ACR71269.1| flagellar hook-associated protein 1 FlgK [Eubacterium eligens ATCC
           27750]
          Length = 523

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 11/102 (10%), Positives = 28/102 (27%), Gaps = 4/102 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV----VGAIKNDIDQKISFV 59
              I      A +  ++  + N++N +T G+                A    +   +   
Sbjct: 7   GLTIAYTGLQAAQTSINVTSHNLANINTKGYTRESASTKAADALRTYARYGTLGSGVVVD 66

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101
           A  +   S     + +  T        +++ +         T
Sbjct: 67  AINQTRDSYYDEKYRNNNTNYGQYNVKNSYMSQIENYLNEFT 108


>gi|291326355|ref|ZP_06124197.2| flagellar hook-associated protein FlgK [Providencia rettgeri DSM
          1131]
 gi|291314693|gb|EFE55146.1| flagellar hook-associated protein FlgK [Providencia rettgeri DSM
          1131]
          Length = 562

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 26/77 (33%), Gaps = 2/77 (2%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFV 59
              N  L+   A +  LS +++N++N     +      F E  G +  +        F 
Sbjct: 18 NNVMNNALSGVNAAQGGLSVISNNLANAGVGYYHRQSAVFGENPGTMTPNGYFGNGTYFS 77

Query: 60 ASGKEYLSKEVGSFIST 76
             +E+       +  +
Sbjct: 78 HVRREFDEFINAQYSQS 94


>gi|21231400|ref|NP_637317.1| flagellar basal body rod protein FlgB [Xanthomonas campestris pv.
          campestris str. ATCC 33913]
 gi|66768547|ref|YP_243309.1| flagellar basal body rod protein FlgB [Xanthomonas campestris pv.
          campestris str. 8004]
 gi|21113066|gb|AAM41241.1| flagellar protein [Xanthomonas campestris pv. campestris str.
          ATCC 33913]
 gi|66573879|gb|AAY49289.1| flagellar protein [Xanthomonas campestris pv. campestris str.
          8004]
          Length = 133

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 25/55 (45%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65
          A    EQR+  +A N+SN DT G++   + F   + A +   D  +      K Y
Sbjct: 15 ALTLREQRMKLIASNLSNVDTPGYKAKDLNFEAALKAAEGVRDGGLMQATDAKHY 69


>gi|46906961|ref|YP_013350.1| flagellar basal body rod protein FlgB [Listeria monocytogenes
           serotype 4b str. F2365]
 gi|47095276|ref|ZP_00232887.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes str.
           1/2a F6854]
 gi|224498792|ref|ZP_03667141.1| flagellar basal body rod protein FlgB [Listeria monocytogenes
           Finland 1988]
 gi|254829367|ref|ZP_05234054.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes FSL
           N3-165]
 gi|254900054|ref|ZP_05259978.1| flagellar basal body rod protein FlgB [Listeria monocytogenes
           J0161]
 gi|254911393|ref|ZP_05261405.1| flagellar basal body rod protein FlgB [Listeria monocytogenes
           J2818]
 gi|254935720|ref|ZP_05267417.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes
           F6900]
 gi|254993618|ref|ZP_05275808.1| flagellar basal body rod protein FlgB [Listeria monocytogenes FSL
           J2-064]
 gi|255025678|ref|ZP_05297664.1| flagellar basal body rod protein FlgB [Listeria monocytogenes FSL
           J2-003]
 gi|46880227|gb|AAT03527.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes
           serotype 4b str. F2365]
 gi|47016347|gb|EAL07269.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes str.
           1/2a F6854]
 gi|258601780|gb|EEW15105.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes FSL
           N3-165]
 gi|258608303|gb|EEW20911.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes
           F6900]
 gi|293589330|gb|EFF97664.1| flagellar basal body rod protein FlgB [Listeria monocytogenes
           J2818]
          Length = 133

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 11/104 (10%), Positives = 30/104 (28%)

Query: 12  QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
              L+     V++N++N +T  F+  +  F E +G+      Q  +  A      + +  
Sbjct: 12  LNYLQTANQVVSNNIANANTPNFKASEASFEESLGSSLRASGQNSTESAGNLTKTNTKHL 71

Query: 72  SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115
           +                    +     + +        +    +
Sbjct: 72  AGTDIDETNAKVTTKSGSINEDGNNVNVTSEMISLTKNNQMYAL 115


>gi|289666045|ref|ZP_06487626.1| flagellar basal body rod protein FlgC [Xanthomonas campestris pv.
           vasculorum NCPPB702]
          Length = 135

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 5/43 (11%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   + + + +M  MI  ++ + +   +++  ++  L  + 
Sbjct: 90  GYVFSPDVDPVSQMVNMISASRNYQAGVEMLNTAKELALATLT 132



 Score = 36.4 bits (82), Expect = 3.1,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 31/84 (36%), Gaps = 8/84 (9%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKISF 58
          F++  +A  A   RLST+A N++N D+V       ++ I+  F       + D       
Sbjct: 7  FDVAGSALHAQSVRLSTIASNLANADSVAGSAEATYKPIEPIFQA--QQSRRDPSLTSVN 64

Query: 59 VASGKEYLSKEVGSFISTGTELDF 82
          V       +  +  +       D 
Sbjct: 65 VKEITTTNAPPIRRYEPGHPLADA 88


>gi|296135676|ref|YP_003642918.1| flagellar basal-body rod protein FlgB [Thiomonas intermedia K12]
 gi|295795798|gb|ADG30588.1| flagellar basal-body rod protein FlgB [Thiomonas intermedia K12]
          Length = 135

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 11/74 (14%), Positives = 25/74 (33%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69
           A     QR   ++ N++N +T G++ + + FS    A  +        + +        
Sbjct: 14 TALNLRAQRQQLLSANIANANTPGYKAVDLDFSAAFKAALSGQQTGGLPLKTENARQLAG 73

Query: 70 VGSFISTGTELDFA 83
            +   +      A
Sbjct: 74 NVAPAGSNFIAYQA 87


>gi|209884536|ref|YP_002288393.1| flagellar basal-body rod protein FlgC [Oligotropha carboxidovorans
           OM5]
 gi|209872732|gb|ACI92528.1| flagellar basal-body rod protein FlgC [Oligotropha carboxidovorans
           OM5]
          Length = 141

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 9/58 (15%), Positives = 22/58 (37%)

Query: 186 LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
            E  +      G ++  N NS+ EM  M    + + +   +I    + +   +  + +
Sbjct: 84  HEPGNPAADANGNVKYPNVNSLVEMTDMREAQRSYEANLNIISATRRMIQRTLDILKA 141



 Score = 42.2 bits (97), Expect = 0.064,   Method: Composition-based stats.
 Identities = 10/59 (16%), Positives = 22/59 (37%), Gaps = 9/59 (15%)

Query: 1  MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKN 50
          M    S +I  +   A   R+  +++N++N D+         +R     F   +    +
Sbjct: 5  MDFLKSMSIATSGLRAQAGRMRVISENIANADSTAGTAGGDPYRRKVPTFVSALDRSLD 63


>gi|149202211|ref|ZP_01879184.1| Flagellar proximal rod protein FlgB [Roseovarius sp. TM1035]
 gi|149144309|gb|EDM32340.1| Flagellar proximal rod protein FlgB [Roseovarius sp. TM1035]
          Length = 128

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 21/44 (47%)

Query: 9  LAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
           +A    EQR + +A N++N  T GF+   + F  V+ A     
Sbjct: 13 ASALNLREQRGAMLASNIANAATPGFKARDMDFETVLNAETGGG 56


>gi|194365682|ref|YP_002028292.1| flagellar basal body rod protein FlgC [Stenotrophomonas maltophilia
           R551-3]
 gi|254521317|ref|ZP_05133372.1| flagellar basal-body rod protein FlgC [Stenotrophomonas sp. SKA14]
 gi|194348486|gb|ACF51609.1| flagellar basal-body rod protein FlgC [Stenotrophomonas maltophilia
           R551-3]
 gi|219718908|gb|EED37433.1| flagellar basal-body rod protein FlgC [Stenotrophomonas sp. SKA14]
          Length = 135

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 4/43 (9%), Positives = 20/43 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   + + + +M  +I  ++ + +   ++   ++  L  + 
Sbjct: 90  GYIYQPDVDPVAQMVNLISTSRNYQAGVEMLTTAKELALATLT 132



 Score = 39.5 bits (90), Expect = 0.43,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 6/56 (10%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQ 54
          F+I  +A  A   R+ST+A N+SN DTV       ++ ++  F  V      +I  
Sbjct: 7  FDIAGSALQAQSVRMSTIASNLSNADTVAGSADAVYKPLEPIFQAVTSKNDPNITS 62


>gi|289808979|ref|ZP_06539608.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp.
          enterica serovar Typhi str. AG3]
          Length = 45

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 16/44 (36%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44
          M  +    + A      + +  A N++N  T GFR        V
Sbjct: 2  MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV 45


>gi|16802752|ref|NP_464237.1| flagellar basal body rod protein FlgB [Listeria monocytogenes
           EGD-e]
 gi|224501985|ref|ZP_03670292.1| flagellar basal body rod protein FlgB [Listeria monocytogenes FSL
           R2-561]
 gi|254830299|ref|ZP_05234954.1| flagellar basal body rod protein FlgB [Listeria monocytogenes
           10403S]
 gi|284801040|ref|YP_003412905.1| flagellar basal body rod protein FlgB [Listeria monocytogenes
           08-5578]
 gi|284994182|ref|YP_003415950.1| flagellar basal body rod protein FlgB [Listeria monocytogenes
           08-5923]
 gi|16410099|emb|CAC98788.1| lmo0710 [Listeria monocytogenes EGD-e]
 gi|284056602|gb|ADB67543.1| flagellar basal body rod protein FlgB [Listeria monocytogenes
           08-5578]
 gi|284059649|gb|ADB70588.1| flagellar basal body rod protein FlgB [Listeria monocytogenes
           08-5923]
          Length = 133

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 11/104 (10%), Positives = 30/104 (28%)

Query: 12  QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
              L+     V++N++N +T  F+  +  F E +G+      Q  +  A      + +  
Sbjct: 12  LNYLQTANQVVSNNIANANTPNFKASEASFEESLGSSLRASGQNSAESAGNLTKTNTKHL 71

Query: 72  SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115
           +                    +     + +        +    +
Sbjct: 72  AGTDIDETNAKVTTKSGSINEDGNNVNVTSEMISLTKNNQMYAL 115


>gi|327478815|gb|AEA82125.1| flagellar hook-associated protein FlgK [Pseudomonas stutzeri DSM
          4166]
          Length = 459

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 13/89 (14%), Positives = 29/89 (32%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66
          IG +   A +  L+    N++N +T GF  +  +   V G     I   +   +  +   
Sbjct: 7  IGYSGVRASQIALTATGQNIANVNTPGFSRLAPEMHSVGGQTATSIGGGVQVSSIRRLSN 66

Query: 67 SKEVGSFISTGTELDFALEGDAWFALESP 95
            +        T+ ++      +      
Sbjct: 67 DFQNQQLWRASTDKNYYGTSQQYLTALEG 95



 Score = 38.3 bits (87), Expect = 0.83,   Method: Composition-based stats.
 Identities = 5/32 (15%), Positives = 11/32 (34%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           S  N   E   ++   Q + +   +I  +   
Sbjct: 420 SAVNLDEEAVNLMAYEQAYQANMKVISTSNDL 451


>gi|291276682|ref|YP_003516454.1| putative flagellar hook-associated protein [Helicobacter mustelae
           12198]
 gi|290963876|emb|CBG39712.1| putative flagellar hook-associated protein [Helicobacter mustelae
           12198]
          Length = 606

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 6/38 (15%), Positives = 15/38 (39%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           S  +   EM  +I     +++   +I   +K +   + 
Sbjct: 566 SQVSVDEEMVNLIKFQSGYSANAKVITAIDKMIDTLLS 603



 Score = 36.0 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 5/27 (18%), Positives = 9/27 (33%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTD 30
          S         A +  +    +N+SN  
Sbjct: 7  SLGTSYTGLQANQLMVDVTGNNISNAS 33


>gi|221636059|ref|YP_002523935.1| flagellar basal-body rod protein FlgC [Thermomicrobium roseum DSM
           5159]
 gi|221158060|gb|ACM07178.1| flagellar basal-body rod protein FlgC [Thermomicrobium roseum DSM
           5159]
          Length = 151

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G +   + + + EM  ++  T+ + +  T++D  +   + A+ 
Sbjct: 105 GIVRYPDIDVVSEMTNLMAATRAYEANVTVLDALKTMAMRALS 147



 Score = 42.5 bits (98), Expect = 0.051,   Method: Composition-based stats.
 Identities = 9/28 (32%), Positives = 14/28 (50%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTV 32
            + L+A  A   R+   A N++N DT 
Sbjct: 7  MRVSLSALTAQRVRMDVTASNLANVDTT 34


>gi|118588734|ref|ZP_01546142.1| hypothetical protein SIAM614_18549 [Stappia aggregata IAM 12614]
 gi|118438720|gb|EAV45353.1| hypothetical protein SIAM614_18549 [Stappia aggregata IAM 12614]
          Length = 617

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 20/48 (41%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50
          ++ N  +      +++L   A N++N DT G+    +  +       N
Sbjct: 5  SALNTAVFGITYNQRQLDVTASNIANADTAGYSKKTISANVYFDGNGN 52


>gi|170741833|ref|YP_001770488.1| flagellar basal body rod protein FlgB [Methylobacterium sp. 4-46]
 gi|168196107|gb|ACA18054.1| flagellar basal body rod protein [Methylobacterium sp. 4-46]
          Length = 127

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 4/61 (6%)

Query: 2  QTSFNI-GLAAQLAL--EQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIKNDIDQKIS 57
           +   + GLA++ A     R +TVA N++N DT G++   V  F+EV+     D+     
Sbjct: 1  MSGIYLFGLASRRAQYLSVRQATVAGNIANADTPGYKARDVVPFAEVLSRAGLDLAATSQ 60

Query: 58 F 58
           
Sbjct: 61 G 61


>gi|212709498|ref|ZP_03317626.1| hypothetical protein PROVALCAL_00540 [Providencia alcalifaciens
          DSM 30120]
 gi|212687836|gb|EEB47364.1| hypothetical protein PROVALCAL_00540 [Providencia alcalifaciens
          DSM 30120]
          Length = 546

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 26/77 (33%), Gaps = 2/77 (2%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFV 59
              N  L+   A +  LS +++N++N     +      F E  G +  +        F 
Sbjct: 3  NNVMNNALSGVNAAQGGLSVISNNLANAGVGYYHRQSAVFGENPGTMTPNGYFGNGTYFS 62

Query: 60 ASGKEYLSKEVGSFIST 76
             +E+       +  +
Sbjct: 63 HVRREFDEFVNAQYSQS 79


>gi|163852027|ref|YP_001640070.1| flagellar basal body rod protein FlgC [Methylobacterium extorquens
           PA1]
 gi|218530781|ref|YP_002421597.1| flagellar basal body rod protein FlgC [Methylobacterium
           chloromethanicum CM4]
 gi|240139294|ref|YP_002963769.1| flagellar basal-body rod protein flgC [Methylobacterium extorquens
           AM1]
 gi|254561750|ref|YP_003068845.1| flagellar basal-body rod protein flgC [Methylobacterium extorquens
           DM4]
 gi|163663632|gb|ABY30999.1| flagellar basal-body rod protein FlgC [Methylobacterium extorquens
           PA1]
 gi|218523084|gb|ACK83669.1| flagellar basal-body rod protein FlgC [Methylobacterium
           chloromethanicum CM4]
 gi|240009266|gb|ACS40492.1| flagellar basal-body rod protein flgC [Methylobacterium extorquens
           AM1]
 gi|254269028|emb|CAX24989.1| flagellar basal-body rod protein flgC [Methylobacterium extorquens
           DM4]
          Length = 136

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 14/109 (12%), Positives = 29/109 (26%), Gaps = 10/109 (9%)

Query: 1   MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKN- 50
           M    S  I  +   A   R+  +A+N++N D+         +R     F+       N 
Sbjct: 1   MDFLKSLGIAASGLKAQSGRMRIIAENIANADSTAQTAGGDPYRRKIPTFTSRFDNELNA 60

Query: 51  DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
            + +          + +K      +     +  L               
Sbjct: 61  SVVEAGRVRRDPTPFRTKHDPGNPAADARGEVRLPNVNGLIENMDMREA 109



 Score = 37.5 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/124 (9%), Positives = 33/124 (26%)

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                      I     +        G    + K+      +  +++   V        P
Sbjct: 13  GLKAQSGRMRIIAENIANADSTAQTAGGDPYRRKIPTFTSRFDNELNASVVEAGRVRRDP 72

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
               T  +  +     RG +   N N + E   M    + + +   ++    + +   + 
Sbjct: 73  TPFRTKHDPGNPAADARGEVRLPNVNGLIENMDMREAQRSYEANLNMVTATRRMISRTLE 132

Query: 240 NIAS 243
            + +
Sbjct: 133 ILKA 136


>gi|225569938|ref|ZP_03778963.1| hypothetical protein CLOHYLEM_06033 [Clostridium hylemonae DSM
          15053]
 gi|225161408|gb|EEG74027.1| hypothetical protein CLOHYLEM_06033 [Clostridium hylemonae DSM
          15053]
          Length = 515

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 25/77 (32%), Gaps = 14/77 (18%)

Query: 1  MQTSFNIGLA----AQLALEQRLSTVADNMSNTDTVGFRTIK----------VKFSEVVG 46
          M  S   G      A  A ++ +     N+SN +T G+   +            FS  V 
Sbjct: 1  MIRSTFAGFTMAQQALSANQRAIDVAGQNLSNINTPGYTRQRLDLASISPVGASFSSSVY 60

Query: 47 AIKNDIDQKISFVASGK 63
            K      +  ++  +
Sbjct: 61 DNKVGQGVMMKGISQIR 77



 Score = 43.3 bits (100), Expect = 0.029,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 19/41 (46%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E+  ++   Q +N+ + L+   ++ + + I +  
Sbjct: 471 SGVNMDEEVMDLMRYHQSYNAASRLMTTMDEMLDKLINDTG 511


>gi|238799422|ref|ZP_04642851.1| hypothetical protein ymoll0001_16400 [Yersinia mollaretii ATCC
          43969]
 gi|238716726|gb|EEQ08613.1| hypothetical protein ymoll0001_16400 [Yersinia mollaretii ATCC
          43969]
          Length = 549

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 20/39 (51%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
           N  ++   A +  LSTV++N++N    G+      F++
Sbjct: 1  MNTAMSGLSAAQYALSTVSNNITNFQVAGYNRQNAIFAQ 39


>gi|222823431|ref|YP_002575005.1| flagellar hook-associated protein FlgK [Campylobacter lari
          RM2100]
 gi|222538653|gb|ACM63754.1| flagellar hook-associated protein FlgK [Campylobacter lari
          RM2100]
          Length = 609

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 12/78 (15%), Positives = 27/78 (34%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
          S   G++   A E +++T  +N+SN + V +   +   S  +   +  +           
Sbjct: 6  SLYTGVSGIKAAEIQINTTGNNISNANAVFYTRQRAVQSSGMSIDRGGLHLGTGTQIDTI 65

Query: 64 EYLSKEVGSFISTGTELD 81
          + L  E   +        
Sbjct: 66 KRLHDEHSYYELKNATTQ 83



 Score = 40.2 bits (92), Expect = 0.24,   Method: Composition-based stats.
 Identities = 23/197 (11%), Positives = 58/197 (29%), Gaps = 12/197 (6%)

Query: 42  SEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101
           ++   A  +   Q  S              SF   GT    AL   ++F  +    I + 
Sbjct: 421 NDYFKAFYHYDGQSDSGNFQINGLKKGYKISFKDKGTNFPGALNVSSFFNGQDASSINV- 479

Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLY 161
            +   +   +    S++G     D+A+  +Q+  +   F   +    S            
Sbjct: 480 -NSSIRNDPNTLKASSNGVDGNNDIANAMLQLQNQKVNFYNKDGTVDSLTLDGYYRKFTG 538

Query: 162 SVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221
            +  +       +   + N+           +        S  N+  E+  +I     + 
Sbjct: 539 KIASNA---ESNSFAHATNMTVFNTAYAEYQS-------KSGVNTNEELAALIQYQASYG 588

Query: 222 SITTLIDENEKSMLEAI 238
           +   ++   ++ +   +
Sbjct: 589 AAAKIVTTVDQMIETLL 605


>gi|90422608|ref|YP_530978.1| flagellar basal body rod protein FlgC [Rhodopseudomonas palustris
           BisB18]
 gi|90104622|gb|ABD86659.1| flagellar basal-body rod protein FlgC [Rhodopseudomonas palustris
           BisB18]
          Length = 139

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 12/100 (12%), Positives = 30/100 (30%)

Query: 143 GEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDS 202
              G    + K                V+ ++ G+         +       + G+++  
Sbjct: 38  RSPGAEPYQRKTTTFTAEMDRAAGVPVVKVKDIGVDRAPFRLDYQPGHPAADQSGYVKLP 97

Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           N N + EM  M    + + +   +I +    +   I  + 
Sbjct: 98  NVNMLIEMADMRETNRTYEANLQVIKQTRSMVSMTIDLLR 137



 Score = 43.3 bits (100), Expect = 0.028,   Method: Composition-based stats.
 Identities = 13/103 (12%), Positives = 29/103 (28%), Gaps = 8/103 (7%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKF-SEVVGAIKNDIDQK 55
           S  I  +   A   RL  V++N++N ++ G       ++     F +E+  A    + + 
Sbjct: 8   SVQIASSGLEAQSTRLRVVSENLANANSTGRSPGAEPYQRKTTTFTAEMDRAAGVPVVKV 67

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98
                    +         +        L         +    
Sbjct: 68  KDIGVDRAPFRLDYQPGHPAADQSGYVKLPNVNMLIEMADMRE 110


>gi|261344136|ref|ZP_05971780.1| flagellar hook-associated protein FlgK [Providencia rustigianii
          DSM 4541]
 gi|282567728|gb|EFB73263.1| flagellar hook-associated protein FlgK [Providencia rustigianii
          DSM 4541]
          Length = 547

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 26/77 (33%), Gaps = 2/77 (2%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFV 59
              N  L+   A +  LS +++N++N     +      F E  G +  +        F 
Sbjct: 3  NNVMNNALSGVNAAQGGLSVISNNLANAGVGYYHRQSAVFGENPGTMTPNGYFGNGTYFS 62

Query: 60 ASGKEYLSKEVGSFIST 76
             +E+       +  +
Sbjct: 63 HVRREFDEFVNAQYSQS 79


>gi|238799104|ref|ZP_04642560.1| Flagellar basal-body rod protein flgB [Yersinia mollaretii ATCC
          43969]
 gi|238717051|gb|EEQ08911.1| Flagellar basal-body rod protein flgB [Yersinia mollaretii ATCC
          43969]
          Length = 137

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 24/65 (36%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   ++ N++N DT GF+   + FS  +  +        + V+          
Sbjct: 15 ALNLRAQRQEILSSNIANADTPGFQARDIDFSSQLQKVMEQGRASGTGVSLSLTSARHIP 74

Query: 71 GSFIS 75
           S + 
Sbjct: 75 ASTVQ 79


>gi|47091673|ref|ZP_00229469.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes str.
           4b H7858]
 gi|226223341|ref|YP_002757448.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes
           Clip81459]
 gi|254824010|ref|ZP_05229011.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes FSL
           J1-194]
 gi|47019992|gb|EAL10729.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes str.
           4b H7858]
 gi|225875803|emb|CAS04506.1| Putative flagellar basal-body rod protein FlgB [Listeria
           monocytogenes serotype 4b str. CLIP 80459]
 gi|293593238|gb|EFG00999.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes FSL
           J1-194]
 gi|328467275|gb|EGF38355.1| flagellar basal body rod protein FlgB [Listeria monocytogenes 1816]
          Length = 133

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 11/104 (10%), Positives = 29/104 (27%)

Query: 12  QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
              L+     V++N++N +T  F+  +  F E  G+      Q  +  A      + +  
Sbjct: 12  LNYLQTANQVVSNNIANANTPNFKASEASFEESFGSSLRASGQNSTESAGNLTKTNTKHL 71

Query: 72  SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115
           +                    +     + +        +    +
Sbjct: 72  AGTDIDETNAKVTTKSGSINEDGNNVNVTSEMISLTKNNQMYAL 115


>gi|307823537|ref|ZP_07653766.1| flagellar hook-associated protein FlgK [Methylobacter
          tundripaludum SV96]
 gi|307735522|gb|EFO06370.1| flagellar hook-associated protein FlgK [Methylobacter
          tundripaludum SV96]
          Length = 612

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 20/52 (38%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M       L+  L  ++ L T  +N+SN  T G+   +V+          D 
Sbjct: 1  MSGLLATSLSGLLVAQRSLETTQNNISNIHTEGYSRQRVEQGTKPAQFTGDG 52


>gi|303248348|ref|ZP_07334609.1| flagellar basal-body rod protein FlgC [Desulfovibrio fructosovorans
           JJ]
 gi|302490256|gb|EFL50170.1| flagellar basal-body rod protein FlgC [Desulfovibrio fructosovorans
           JJ]
          Length = 146

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 25/71 (35%), Gaps = 6/71 (8%)

Query: 168 GFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
           G V           P  P  +        G++   + N + EM  MI   + + + ++ I
Sbjct: 78  GLVNDNRPFRMQYEPGHPDANAE------GYVAYPDINVVEEMANMITAMRSYEASSSSI 131

Query: 228 DENEKSMLEAI 238
              +    +A+
Sbjct: 132 GTVKTMFSKAL 142



 Score = 38.3 bits (87), Expect = 0.91,   Method: Composition-based stats.
 Identities = 9/34 (26%), Positives = 18/34 (52%), Gaps = 2/34 (5%)

Query: 1  MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTV 32
          M   T+ +IG +   A    ++T++ N++N  T 
Sbjct: 1  MDLFTAMDIGSSGMSAQRTLMNTISMNLANIRTT 34


>gi|268680293|ref|YP_003304724.1| flagellar basal-body rod protein FlgB [Sulfurospirillum
          deleyianum DSM 6946]
 gi|268618324|gb|ACZ12689.1| flagellar basal-body rod protein FlgB [Sulfurospirillum
          deleyianum DSM 6946]
          Length = 144

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 23/55 (41%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
          A   A   R   ++ N++N DT  ++   + F   +   K +I  + S   + + 
Sbjct: 14 AGLNARAMRQDLISSNIANIDTPFYKARDIDFESALIEKKREIYGQNSTADTLEM 68


>gi|125974729|ref|YP_001038639.1| flagellar hook-associated protein FlgK [Clostridium thermocellum
          ATCC 27405]
 gi|125714954|gb|ABN53446.1| flagellar hook-associated protein FlgK [Clostridium thermocellum
          ATCC 27405]
          Length = 489

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 16/43 (37%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46
             I  +     E+ LS    N++N +T G+   +   +    
Sbjct: 5  GLEIARSGMYVNERALSVTGHNVANVNTKGYARQQAMITTAPY 47



 Score = 39.5 bits (90), Expect = 0.37,   Method: Composition-based stats.
 Identities = 5/39 (12%), Positives = 15/39 (38%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            +   EM  M+     +++ +  I+  +  +   I  + 
Sbjct: 447 VSMDEEMSNMMRYKFAYSASSRAINVIDDMLETIITRMG 485


>gi|325918874|ref|ZP_08180951.1| flagellar basal-body rod protein FlgB [Xanthomonas vesicatoria
          ATCC 35937]
 gi|325534911|gb|EGD06830.1| flagellar basal-body rod protein FlgB [Xanthomonas vesicatoria
          ATCC 35937]
          Length = 133

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 25/55 (45%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65
          A    EQR+  +A N+SN DT G++   + F   + + +   D  +      K Y
Sbjct: 15 ALSLREQRMKLIASNLSNVDTPGYKAKDLNFEAALKSAQGMQDGGLMQATDAKHY 69


>gi|119952979|ref|YP_945188.1| flagellar hook-associated protein FlgK [Borrelia turicatae 91E135]
 gi|119861750|gb|AAX17518.1| flagellar hook-associated protein 1 [Borrelia turicatae 91E135]
          Length = 627

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 16/41 (39%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E+  MI   Q F + +  I  + + +   I  + 
Sbjct: 586 SGVNKDEELANMIEFQQSFIAASKFITVSAELIDTIINKMG 626


>gi|289670504|ref|ZP_06491579.1| flagellar basal body rod protein FlgC [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 135

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 5/43 (11%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   + + + +M  MI  ++ + +   +++  ++  L  + 
Sbjct: 90  GYVFSPDVDPVSQMVNMISTSRNYQAGVEMLNTAKELALATLT 132



 Score = 35.6 bits (80), Expect = 6.4,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 31/84 (36%), Gaps = 8/84 (9%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKISF 58
          F++  +A  A   RLST+A N++N D+V       ++ I+  F       + D       
Sbjct: 7  FDVAGSALHAHSVRLSTIASNLANADSVAGSAEATYKPIEPIFQA--QQSRRDPSLTSVN 64

Query: 59 VASGKEYLSKEVGSFISTGTELDF 82
          V       +  +  +       D 
Sbjct: 65 VKEITTTNAPPIRRYEPGHPLADA 88


>gi|172057891|ref|YP_001814351.1| flagellar basal-body rod protein FlgB [Exiguobacterium sibiricum
          255-15]
 gi|171990412|gb|ACB61334.1| flagellar basal-body rod protein FlgB [Exiguobacterium sibiricum
          255-15]
          Length = 120

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 9/28 (32%), Positives = 18/28 (64%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVV 45
              ++ N++N DT G++  +V FS+V+
Sbjct: 21 AQKVISTNIANVDTPGYKAKRVVFSDVL 48


>gi|306820110|ref|ZP_07453758.1| flagellar basal-body rod protein FlgB [Eubacterium yurii subsp.
          margaretiae ATCC 43715]
 gi|304551888|gb|EFM39831.1| flagellar basal-body rod protein FlgB [Eubacterium yurii subsp.
          margaretiae ATCC 43715]
          Length = 133

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 21/41 (51%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50
           A  A   R  +++ N++N +T  ++   V+F E + A  +
Sbjct: 13 TALDAYSMRNESISSNLANVNTPNYKRKYVRFEEYLTASYD 53


>gi|238764397|ref|ZP_04625347.1| hypothetical protein ykris0001_37640 [Yersinia kristensenii ATCC
          33638]
 gi|238697423|gb|EEP90190.1| hypothetical protein ykris0001_37640 [Yersinia kristensenii ATCC
          33638]
          Length = 338

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 20/39 (51%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
           N  ++   A +  LSTV++N+SN    G+      F++
Sbjct: 1  MNTAMSGLSAAQYALSTVSNNISNFQVAGYNRQNTVFAQ 39


>gi|325918875|ref|ZP_08180952.1| flagellar basal-body rod protein FlgC [Xanthomonas vesicatoria ATCC
           35937]
 gi|325534912|gb|EGD06831.1| flagellar basal-body rod protein FlgC [Xanthomonas vesicatoria ATCC
           35937]
          Length = 135

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 5/43 (11%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   + + + +M  MI  ++ + +   +++  ++  L  + 
Sbjct: 90  GYVFSPDVDPVSQMVNMISASRNYQAGVEMLNTAKELALATLT 132



 Score = 36.0 bits (81), Expect = 5.1,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 31/84 (36%), Gaps = 8/84 (9%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKISF 58
          F++  +A  A   RLST+A N++N D+V       ++ I+  F       + D       
Sbjct: 7  FDVAGSALHAQSVRLSTIASNLANADSVAGSVEATYKPIEPIFQA--QQSRQDPSLTSVN 64

Query: 59 VASGKEYLSKEVGSFISTGTELDF 82
          V       +  +  +       D 
Sbjct: 65 VKEITTTNAPPIRRYEPGHPLADA 88


>gi|299131775|ref|ZP_07024970.1| flagellar basal-body rod protein FlgC [Afipia sp. 1NLS2]
 gi|298591912|gb|EFI52112.1| flagellar basal-body rod protein FlgC [Afipia sp. 1NLS2]
          Length = 141

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 9/58 (15%), Positives = 22/58 (37%)

Query: 186 LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
            E  +      G ++  N NS+ EM  M    + + +   +I    + +   +  + +
Sbjct: 84  HEPGNPAADANGNVKYPNVNSLVEMTDMREAQRSYEANLNIISATRRMIQRTLDILKA 141



 Score = 43.7 bits (101), Expect = 0.024,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 9/59 (15%)

Query: 1  MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKN 50
          M    S +I  +   A   R+  +++N++N D+         +R     FS  +    +
Sbjct: 5  MDFLKSMSIATSGLRAQAGRMRVISENIANADSTASTAGGDPYRRKVPTFSSTLDRTLD 63


>gi|119469956|ref|ZP_01612761.1| putative flagellar hook-associated protein [Alteromonadales
          bacterium TW-7]
 gi|119446666|gb|EAW27939.1| putative flagellar hook-associated protein [Alteromonadales
          bacterium TW-7]
          Length = 667

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 22/54 (40%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56
             NI  +   A  + L T + N++N +T G+   + + + +V       +   
Sbjct: 4  NLLNIASSGVRANSELLQTTSKNIANVNTEGYVRERTEHTTMVDNQVGKGETYR 57


>gi|77463654|ref|YP_353158.1| flagellar basal-body rod protein FlgC [Rhodobacter sphaeroides
          2.4.1]
 gi|77388072|gb|ABA79257.1| flagellar basal-body rod protein FlgC [Rhodobacter sphaeroides
          2.4.1]
          Length = 138

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 30/87 (34%), Gaps = 6/87 (6%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDT------VGFRTIKVKFSEVVGAIKNDIDQK 55
           + F++G  A  A   R++TVA N++N  T        FR ++  F              
Sbjct: 5  DSVFDVGARALSAQMVRMNTVASNLANAGTVSDKAETAFRPLRPVFETSYADAVGRTGLS 64

Query: 56 ISFVASGKEYLSKEVGSFISTGTELDF 82
           + VA       +    +     + D 
Sbjct: 65 TTDVAGVVSLDREPARVYRPDHPQADP 91



 Score = 35.2 bits (79), Expect = 7.0,   Method: Composition-based stats.
 Identities = 4/36 (11%), Positives = 13/36 (36%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +   EM +M+  ++++ +    +      M     
Sbjct: 100 VSVDEEMVEMMEASRQYQNTLEAVSTLRSLMARTAS 135


>gi|261821159|ref|YP_003259265.1| flagellar hook-associated protein FlgK [Pectobacterium wasabiae
          WPP163]
 gi|261605172|gb|ACX87658.1| flagellar hook-associated protein FlgK [Pectobacterium wasabiae
          WPP163]
          Length = 556

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 31/82 (37%), Gaps = 2/82 (2%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA--IKNDIDQKISF 58
          M    N  ++     +  LSTV++N+SN   +G+        + + +      I   ++ 
Sbjct: 1  MSNLINTAMSGLKGAQVALSTVSNNISNQAVIGYSRQNTIIEQAISSSTSAGYIGNGVNV 60

Query: 59 VASGKEYLSKEVGSFISTGTEL 80
          V+  ++Y         S  T  
Sbjct: 61 VSVDRQYNEFISNQLRSAQTTS 82


>gi|126444366|ref|YP_001061244.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           668]
 gi|134280640|ref|ZP_01767350.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           305]
 gi|254299688|ref|ZP_04967137.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           406e]
 gi|125657216|gb|ABN48704.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei]
 gi|126223857|gb|ABN87362.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           668]
 gi|134247662|gb|EBA47746.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           305]
 gi|157809503|gb|EDO86673.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei
           406e]
          Length = 138

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 19/42 (45%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G +   N N + EM  M+  ++ +++   ++       LE +
Sbjct: 93  GNVLYPNVNPVEEMTDMLSASRAYSTNVEVLGRVNGMQLELL 134



 Score = 41.4 bits (95), Expect = 0.12,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 37/99 (37%), Gaps = 7/99 (7%)

Query: 7   IGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKISFVA 60
           I  +A  A   RL+T+A N++N D+        +R  K  F+ +         +  +   
Sbjct: 9   IAGSAMSAQTVRLNTIASNLANADSASGTEDATYRARKPVFASIFQLDAQGEPRGAAVQV 68

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
                 ++ +      G  L  A EG+  +   +P   +
Sbjct: 69  LDVVKSTEPLRKVHQPGHPLADA-EGNVLYPNVNPVEEM 106


>gi|124516723|gb|EAY58231.1| Flagellar hook-associated protein FlgK [Leptospirillum rubarum]
          Length = 561

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 1/57 (1%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           NIG +   A E  LST   N+SN +T G+    V+F +             + V +
Sbjct: 8  LNIGKSGIEANEAGLSTAGQNISNVNTPGYTVENVQF-DQSQPNHGSPGMVGNGVRA 63


>gi|114569242|ref|YP_755922.1| flagellar hook-associated protein FlgK [Maricaulis maris MCS10]
 gi|114339704|gb|ABI64984.1| flagellar hook-associated protein FlgK [Maricaulis maris MCS10]
          Length = 713

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 15/36 (41%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
              L+   A +  L   ++N++N +T G+      
Sbjct: 7  LGNALSGLQASQAGLRASSNNVANVNTPGYARTIAS 42


>gi|269796401|ref|YP_003315856.1| flagellar basal-body rod protein FlgB [Sanguibacter keddieii DSM
          10542]
 gi|269098586|gb|ACZ23022.1| flagellar basal-body rod protein FlgB [Sanguibacter keddieii DSM
          10542]
          Length = 113

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 12/80 (15%), Positives = 32/80 (40%), Gaps = 1/80 (1%)

Query: 2  QTSFNIGL-AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           +   + L +A   L  R   +A+N++N +T  +   +V F   + +        ++   
Sbjct: 3  DSVTFVALNSALDGLALRQRVIANNVANINTPNYLAGRVSFESELASAVRRGTGAVTATQ 62

Query: 61 SGKEYLSKEVGSFISTGTEL 80
          +     ++  G+ ++   E 
Sbjct: 63 ARSLEPTRLDGNNVNLDAET 82


>gi|254973909|ref|ZP_05270381.1| flagellar basal-body rod protein [Clostridium difficile QCD-66c26]
 gi|255091295|ref|ZP_05320773.1| flagellar basal-body rod protein [Clostridium difficile CIP 107932]
 gi|255312953|ref|ZP_05354536.1| flagellar basal-body rod protein [Clostridium difficile QCD-76w55]
 gi|255515712|ref|ZP_05383388.1| flagellar basal-body rod protein [Clostridium difficile QCD-97b34]
 gi|255648806|ref|ZP_05395708.1| flagellar basal-body rod protein [Clostridium difficile QCD-37x79]
 gi|260682025|ref|YP_003213310.1| flagellar basal-body rod protein [Clostridium difficile CD196]
 gi|260685623|ref|YP_003216756.1| flagellar basal-body rod protein [Clostridium difficile R20291]
 gi|306518921|ref|ZP_07405268.1| flagellar basal-body rod protein [Clostridium difficile QCD-32g58]
 gi|260208188|emb|CBA60522.1| flagellar basal-body rod protein [Clostridium difficile CD196]
 gi|260211639|emb|CBE01890.1| flagellar basal-body rod protein [Clostridium difficile R20291]
          Length = 105

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 31/93 (33%), Gaps = 2/93 (2%)

Query: 11  AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
              A   R  T+A+N++N +T G++   V F E +      I++K       +   +   
Sbjct: 10  GLDATNLRSQTIANNIANINTEGYKRHYVTFEETLNDAMPKIEEKTDNSKGLRVDGNNVD 69

Query: 71  GSFISTGTELDFALEGDAWFALESPRGIILTRD 103
                       A          +   I +T+ 
Sbjct: 70  IEEEKVNQA--MATLQYNALISFANGKIAMTKS 100


>gi|261409644|ref|YP_003245885.1| flagellar hook-associated protein FlgK [Paenibacillus sp. Y412MC10]
 gi|261286107|gb|ACX68078.1| flagellar hook-associated protein FlgK [Paenibacillus sp. Y412MC10]
          Length = 520

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 6/41 (14%), Positives = 19/41 (46%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  +   EM  +I L   + + +  +   ++++ + I ++ 
Sbjct: 476 SGVSLDEEMSNLIKLQHSYGAASRFMTTVDQNLDKIINSMG 516



 Score = 41.0 bits (94), Expect = 0.15,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 13/36 (36%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39
                 +  A    ++T   N++N  T G+    V
Sbjct: 7  GIETAKRSLFAQMAGMNTTGHNIANASTPGYSRQVV 42


>gi|187918055|ref|YP_001883618.1| flagellar hook-associated protein FlgK [Borrelia hermsii DAH]
 gi|119860903|gb|AAX16698.1| flagellar hook-associated protein 1 [Borrelia hermsii DAH]
          Length = 627

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 16/41 (39%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E+  MI   Q F + +  I  + + +   I  + 
Sbjct: 586 SGVNKDEELANMIEFQQSFIAASKFITVSAELIDTIINKMG 626



 Score = 34.8 bits (78), Expect = 9.1,   Method: Composition-based stats.
 Identities = 13/92 (14%), Positives = 30/92 (32%), Gaps = 5/92 (5%)

Query: 1  MQT---SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS 57
          M +      IG  +  A +  ++T+  N++NT   G+   +V     +      +++   
Sbjct: 1  MDSTFSGIEIGKKSLFAHKDAMNTIGHNLTNTSKPGYSRQRVIMKTEMPIYAPQLNRANK 60

Query: 58 FVASGKEYLSKEVGSFISTGTELDFALEGDAW 89
            A                   LD  +  ++ 
Sbjct: 61 --AGQLGQGMMVQSIERIRDDLLDIRIAEESH 90


>gi|320353947|ref|YP_004195286.1| flagellar hook-associated protein FlgK [Desulfobulbus propionicus
          DSM 2032]
 gi|320122449|gb|ADW17995.1| flagellar hook-associated protein FlgK [Desulfobulbus propionicus
          DSM 2032]
          Length = 465

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 13/87 (14%), Positives = 26/87 (29%), Gaps = 3/87 (3%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           TS   G +     +  +    +N++N  T G+         V  +             S
Sbjct: 5  ITSLYTGASGIFTSQTAIQVTGNNITNAATEGYSRQTAH---VTSSTPLTQGGLTYGTGS 61

Query: 62 GKEYLSKEVGSFISTGTELDFALEGDA 88
            + + +   +FI+       A  G  
Sbjct: 62 AVDAIDRANDAFITRQLMAQSATYGQY 88



 Score = 36.0 bits (81), Expect = 4.9,   Method: Composition-based stats.
 Identities = 6/38 (15%), Positives = 16/38 (42%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           S  ++  EM  +I     + + +  I   ++ +   +R
Sbjct: 427 SGVSTDEEMVLLIQYQAGYEAASNYISVVKEMLDTLLR 464


>gi|220905263|ref|YP_002480575.1| flagellar hook-associated protein FlgK [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
 gi|219869562|gb|ACL49897.1| flagellar hook-associated protein FlgK [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
          Length = 715

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 6/35 (17%), Positives = 13/35 (37%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            N   EM  +I     + +   LI   ++ +   +
Sbjct: 677 VNLDEEMSNLIKFQHSYTAAAKLITTADQMLQTLL 711



 Score = 42.9 bits (99), Expect = 0.034,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 23/82 (28%), Gaps = 1/82 (1%)

Query: 1  MQTSF-NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFV 59
          M     NIG  A  A +  +S    N++N DT G+    V   +          + +   
Sbjct: 1  MLNGLLNIGKTALGASQAWISVTGSNIANADTEGYSRRYVDQRDAGTITAKPGGESLGVN 60

Query: 60 ASGKEYLSKEVGSFISTGTELD 81
          A                    +
Sbjct: 61 AQQIMRFFDAFLERSYVRQSTN 82


>gi|188583283|ref|YP_001926728.1| hypothetical protein Mpop_4075 [Methylobacterium populi BJ001]
 gi|179346781|gb|ACB82193.1| protein of unknown function DUF1078 domain protein
           [Methylobacterium populi BJ001]
          Length = 113

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 7/47 (14%), Positives = 17/47 (36%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           G L+  N     EM ++    + + +    I   +    + +  + S
Sbjct: 67  GNLKLPNVRPTVEMSELRSAMRAYEANLRTIATFDDLKGKTLALLKS 113


>gi|34497157|ref|NP_901372.1| flagellar basal-body rod protein flgC [Chromobacterium violaceum
           ATCC 12472]
 gi|34103014|gb|AAQ59377.1| flagellar basal-body rod protein flgC [Chromobacterium violaceum
           ATCC 12472]
          Length = 134

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 19/37 (51%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           SN N++ EM  M+  T+ F +   ++ + +    + +
Sbjct: 92  SNVNAVEEMTDMLSATRAFQTNVEVLAKVKTMQQDLL 128



 Score = 37.9 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 38/126 (30%), Gaps = 8/126 (6%)

Query: 7   IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           I  +A  A   RL+TVA N++N DT        +R  K  FS  +      + Q +  V 
Sbjct: 9   IAGSAMTAQTVRLNTVASNIANADTASGAEQSAYRGRKPVFSSQMQGEGMGV-QVLDVVQ 67

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           + +               + +            +      TR  +  V     + +    
Sbjct: 68  NQEPVRKAHEPGNPLADADGNVFYSNVNAVEEMTDMLSA-TRAFQTNVEVLAKVKTMQQD 126

Query: 121 YPVLDM 126
              L  
Sbjct: 127 LLKLGD 132


>gi|238916743|ref|YP_002930260.1| flagellar basal-body rod protein FlgB [Eubacterium eligens ATCC
          27750]
 gi|238872103|gb|ACR71813.1| flagellar basal-body rod protein FlgB [Eubacterium eligens ATCC
          27750]
          Length = 130

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 24/61 (39%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69
          +A  A   R   + +N++N DT  ++   V+FS  +        +  S +      ++  
Sbjct: 14 SAADASWTREEVLTNNIANVDTPNYKRQDVEFSSFLANALQRSGKSTSSLTQRVNNVNYN 73

Query: 70 V 70
           
Sbjct: 74 D 74


>gi|23009956|ref|ZP_00050814.1| COG1558: Flagellar basal body rod protein [Magnetospirillum
           magnetotacticum MS-1]
          Length = 136

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 12/106 (11%), Positives = 28/106 (26%), Gaps = 8/106 (7%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKND-ID 53
             S  I  +   A   R+  +A+N++N D+         +R     F+       +  + 
Sbjct: 4   MKSLGIAASGLKAQSGRMRIIAENIANADSTAKTAGGEPYRRKVPTFASRFDRELDAKVI 63

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
           +          + +K      +     +  L               
Sbjct: 64  EAGRIARDPSPFRTKYDPGNPAADARGEVRLPNVNGLIENMDMREA 109



 Score = 37.2 bits (84), Expect = 2.2,   Method: Composition-based stats.
 Identities = 5/47 (10%), Positives = 17/47 (36%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           G +   N N + E   M    + + +   ++    + +   +  + +
Sbjct: 90  GEVRLPNVNGLIENMDMREAQRSYEANLNMVTATRRMISRTLDILKA 136


>gi|330889076|gb|EGH21737.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
          mori str. 301020]
          Length = 546

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 35/97 (36%), Gaps = 1/97 (1%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           +  +IGL+   A    ++T+ +N +N DT G+   +V  +     I   +        +
Sbjct: 1  MSLISIGLSGINASSAAINTIGNNTANVDTAGYSRQQVM-TTASAQINIGLGVGYIGTGT 59

Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98
              + +   S++    +   AL  DA          
Sbjct: 60 TLSDVRRIYNSYLDAQLQTSTALSADAVAYSGQASKT 96


>gi|298345987|ref|YP_003718674.1| flagellar basal body rod protein [Mobiluncus curtisii ATCC 43063]
 gi|304390255|ref|ZP_07372209.1| flagellar basal-body rod protein FlgB [Mobiluncus curtisii subsp.
          curtisii ATCC 35241]
 gi|315654574|ref|ZP_07907480.1| flagella basal body rod protein [Mobiluncus curtisii ATCC 51333]
 gi|315657520|ref|ZP_07910402.1| flagella basal body rod protein [Mobiluncus curtisii subsp.
          holmesii ATCC 35242]
 gi|298236048|gb|ADI67180.1| flagellar basal body rod protein [Mobiluncus curtisii ATCC 43063]
 gi|304326737|gb|EFL93981.1| flagellar basal-body rod protein FlgB [Mobiluncus curtisii subsp.
          curtisii ATCC 35241]
 gi|315491038|gb|EFU80657.1| flagella basal body rod protein [Mobiluncus curtisii ATCC 51333]
 gi|315491992|gb|EFU81601.1| flagella basal body rod protein [Mobiluncus curtisii subsp.
          holmesii ATCC 35242]
          Length = 115

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 32/77 (41%), Gaps = 2/77 (2%)

Query: 6  NIGL-AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS-EVVGAIKNDIDQKISFVASGK 63
           + +  A   L  R   +ADN++N  T GF   KV F  E+  A++           +  
Sbjct: 7  YVAMRTALDGLSMRQRVIADNIANIQTPGFLAGKVSFENELARAVQFGHPATTHIATARS 66

Query: 64 EYLSKEVGSFISTGTEL 80
             ++  G+ ++  TE 
Sbjct: 67 LEPTRIDGNNVNLDTET 83


>gi|21242729|ref|NP_642311.1| flagellar basal body rod protein FlgC [Xanthomonas axonopodis pv.
           citri str. 306]
 gi|294625272|ref|ZP_06703911.1| flagellar biosynthesis cell-proximal portion of basal-body rod
           [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           11122]
 gi|294664589|ref|ZP_06729930.1| flagellar biosynthesis cell-proximal portion of basal-body rod
           [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           10535]
 gi|21108205|gb|AAM36847.1| flagellar biosynthesis cell-proximal portion of basal-body rod
           [Xanthomonas axonopodis pv. citri str. 306]
 gi|268589170|gb|ACZ06861.1| flagella basal body rod protein [Xanthomonas axonopodis pv.
           glycines]
 gi|292600446|gb|EFF44544.1| flagellar biosynthesis cell-proximal portion of basal-body rod
           [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           11122]
 gi|292605646|gb|EFF48956.1| flagellar biosynthesis cell-proximal portion of basal-body rod
           [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           10535]
          Length = 135

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 5/43 (11%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   + + + +M  MI  ++ + +   +++  ++  L  + 
Sbjct: 90  GYVFSPDVDPVSQMVNMISASRNYQAGVEMLNTAKELALATLT 132



 Score = 35.6 bits (80), Expect = 5.5,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 31/84 (36%), Gaps = 8/84 (9%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKISF 58
          F++  +A  A   RLST+A N++N D+V       ++ I+  F       + D       
Sbjct: 7  FDVAGSALHAQSVRLSTIASNLANADSVAGSAEATYKPIEPIFQA--QQSRQDPSLTSVN 64

Query: 59 VASGKEYLSKEVGSFISTGTELDF 82
          V       +  +  +       D 
Sbjct: 65 VKEITTTNAPPIRRYEPGHPLADA 88


>gi|308273550|emb|CBX30152.1| hypothetical protein N47_D29610 [uncultured Desulfobacterium sp.]
          Length = 584

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 7/46 (15%), Positives = 19/46 (41%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          I  +A  A    +   + N++N +T G+      +   +    +++
Sbjct: 10 IANSALSAQRYGIEITSHNIANVNTNGYTRQNPIYEAKLPGSYSNL 55



 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 7/38 (18%), Positives = 15/38 (39%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           S  +   EM  +I   Q + +   LI   ++ +   + 
Sbjct: 545 SAVSLDEEMANLIKFQQAYTAAAKLISIADEMLDTLLN 582


>gi|304392508|ref|ZP_07374448.1| flagellar basal-body rod protein FlgC [Ahrensia sp. R2A130]
 gi|303295138|gb|EFL89498.1| flagellar basal-body rod protein FlgC [Ahrensia sp. R2A130]
          Length = 138

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 15/93 (16%), Positives = 31/93 (33%)

Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNAN 205
           G    + K I          +   V  +  G  P+      +  S     +G ++  N N
Sbjct: 40  GGEPYQRKTITFTSALDQANAAQMVDVDKIGRDPSSFSAKFDPSSPGADAKGMVKMPNVN 99

Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            + EM  M    + + S   ++ + +  +   I
Sbjct: 100 VLVEMADMRDANRAYESNLQVMKQVQDMVTATI 132



 Score = 37.9 bits (86), Expect = 1.2,   Method: Composition-based stats.
 Identities = 8/53 (15%), Positives = 20/53 (37%), Gaps = 7/53 (13%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIK 49
          +  +  +   A  QRL  V+ N++N  +         ++   + F+  +    
Sbjct: 7  AMKVASSGLAAQSQRLEVVSQNIANAQSTSRVAGGEPYQRKTITFTSALDQAN 59


>gi|296447440|ref|ZP_06889365.1| flagellar basal-body rod protein FlgC [Methylosinus trichosporium
           OB3b]
 gi|296255060|gb|EFH02162.1| flagellar basal-body rod protein FlgC [Methylosinus trichosporium
           OB3b]
          Length = 139

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 12/93 (12%), Positives = 28/93 (30%)

Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNAN 205
           G      K I+             V+    G+         +  +      G+++  N N
Sbjct: 40  GGAPYSRKTISFQSEVDRASGASLVQVGPIGVDRAPFRVEHDPGNPAADTDGYVKYPNVN 99

Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            M E+  M    + + +   ++ +  +     I
Sbjct: 100 LMTEVADMREANRSYEANVQVMKQTRELFSMTI 132



 Score = 37.5 bits (85), Expect = 1.6,   Method: Composition-based stats.
 Identities = 18/115 (15%), Positives = 39/115 (33%), Gaps = 2/115 (1%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           S  I  +   A   RL  VA+NM+N  +V        +S    + ++++D+         
Sbjct: 7   SMKIAGSGLSAQSARLRVVAENMANAQSVAKTAGGAPYSRKTISFQSEVDRASGASLVQV 66

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSAS 118
             +  +   F       + A + D +     P   ++T     +  +     +  
Sbjct: 67  GPIGVDRAPFRVEHDPGNPAADTDGYVKY--PNVNLMTEVADMREANRSYEANVQ 119


>gi|226320911|ref|ZP_03796462.1| Flagellar hook-associated protein 1 [Borrelia burgdorferi 29805]
 gi|226233683|gb|EEH32413.1| Flagellar hook-associated protein 1 [Borrelia burgdorferi 29805]
          Length = 283

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 16/41 (39%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E+  MI   Q F + +  I  + + +   I  + 
Sbjct: 242 SGVNKDEELANMIEFQQAFIAASKFITVSVELIDTVINKMG 282


>gi|281418802|ref|ZP_06249821.1| flagellar hook-associated protein FlgK [Clostridium thermocellum
          JW20]
 gi|281407886|gb|EFB38145.1| flagellar hook-associated protein FlgK [Clostridium thermocellum
          JW20]
          Length = 489

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 15/37 (40%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
             I  +     E+ LS    N++N +T G+   +  
Sbjct: 5  GLEIARSGMYVNERALSVTGHNVANVNTKGYARQQAM 41



 Score = 39.5 bits (90), Expect = 0.38,   Method: Composition-based stats.
 Identities = 5/39 (12%), Positives = 15/39 (38%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            +   EM  M+     +++ +  I+  +  +   I  + 
Sbjct: 447 VSMDEEMSNMMRYKFAYSASSRAINVIDDMLETIITRMG 485


>gi|71906397|ref|YP_283984.1| flagellar hook-associated protein FlgK [Dechloromonas aromatica
          RCB]
 gi|71846018|gb|AAZ45514.1| Protein of unknown function DUF1078 [Dechloromonas aromatica RCB]
          Length = 683

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 25/67 (37%), Gaps = 2/67 (2%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE--VVGAIKNDIDQKISF 58
          M    +I +    A +  L T  +N+SN +T G+   +V  +    V        Q    
Sbjct: 1  MSGLISIAVTGINAAQAGLLTTTNNISNLNTEGYTRQRVVQASNPTVMTGAGGFGQGAHV 60

Query: 59 VASGKEY 65
          V   + Y
Sbjct: 61 VTVERMY 67


>gi|78047588|ref|YP_363763.1| flagellar basal body rod protein FlgC [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|84624086|ref|YP_451458.1| flagellar basal body rod protein FlgC [Xanthomonas oryzae pv.
           oryzae MAFF 311018]
 gi|166712064|ref|ZP_02243271.1| flagellar basal body rod protein FlgC [Xanthomonas oryzae pv.
           oryzicola BLS256]
 gi|188576754|ref|YP_001913683.1| flagellar basal body rod protein FlgC [Xanthomonas oryzae pv.
           oryzae PXO99A]
 gi|188576945|ref|YP_001913874.1| flagellar basal body rod protein FlgC [Xanthomonas oryzae pv.
           oryzae PXO99A]
 gi|325927873|ref|ZP_08189097.1| flagellar basal-body rod protein FlgC [Xanthomonas perforans
           91-118]
 gi|78036018|emb|CAJ23709.1| flagellar basal body rod protein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|84368026|dbj|BAE69184.1| flagellar biosynthesis protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188521206|gb|ACD59151.1| flagellar basal-body rod protein FlgC [Xanthomonas oryzae pv.
           oryzae PXO99A]
 gi|188521397|gb|ACD59342.1| flagellar basal-body rod protein FlgC [Xanthomonas oryzae pv.
           oryzae PXO99A]
 gi|325541713|gb|EGD13231.1| flagellar basal-body rod protein FlgC [Xanthomonas perforans
           91-118]
          Length = 135

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 5/43 (11%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   + + + +M  MI  ++ + +   +++  ++  L  + 
Sbjct: 90  GYVFSPDVDPVSQMVNMISASRNYQAGVEMLNTAKELALATLT 132



 Score = 35.6 bits (80), Expect = 5.5,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 31/84 (36%), Gaps = 8/84 (9%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKISF 58
          F++  +A  A   RLST+A N++N D+V       ++ I+  F       + D       
Sbjct: 7  FDVAGSALHAQSVRLSTIASNLANADSVAGSAEATYKPIEPIFQA--QQSRQDPSLTSVN 64

Query: 59 VASGKEYLSKEVGSFISTGTELDF 82
          V       +  +  +       D 
Sbjct: 65 VKEITTTNAPPIRRYEPGHPLADA 88


>gi|153949847|ref|YP_001399640.1| flagellar hook-associated protein FlgK [Yersinia
          pseudotuberculosis IP 31758]
 gi|152961342|gb|ABS48803.1| flagellar hook-associated protein FlgK [Yersinia
          pseudotuberculosis IP 31758]
          Length = 453

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 8/53 (15%), Positives = 20/53 (37%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54
                  +   A +  L+  + N++N  T G+   + + S +    +  I+ 
Sbjct: 1  MNFIKTAFSGMQATQAHLNATSMNIANIHTPGYSRQRAEQSAIGADGQGGINA 53



 Score = 38.3 bits (87), Expect = 0.86,   Method: Composition-based stats.
 Identities = 6/37 (16%), Positives = 15/37 (40%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N+  E   ++   + + S   +I   +K   + +
Sbjct: 414 SGVNNDEEAINLMEYQRAYQSNMKVIATGDKLFSDLL 450


>gi|119947171|ref|YP_944851.1| flagellar hook-associated protein FlgK [Psychromonas ingrahamii
          37]
 gi|119865775|gb|ABM05252.1| flagellar hook-associated protein FlgK [Psychromonas ingrahamii
          37]
          Length = 454

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 32/79 (40%), Gaps = 2/79 (2%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           + +NI L+   A    L+  A N++N +T G    +   S +     ND+   +   + 
Sbjct: 1  MSIYNIALSGVSANRTALNITAQNIANANTAGHSRQQAVQSSI--TRSNDVGAGVEVSSI 58

Query: 62 GKEYLSKEVGSFISTGTEL 80
           +      +    S+ TEL
Sbjct: 59 RRMADQFIISQLRSSNTEL 77



 Score = 35.6 bits (80), Expect = 6.1,   Method: Composition-based stats.
 Identities = 6/38 (15%), Positives = 13/38 (34%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           S  NS  E   ++     + +   +I    +     +R
Sbjct: 415 SGVNSDEEAANLMIYANAYEANMKVISTANQMFNSILR 452


>gi|256005260|ref|ZP_05430227.1| flagellar hook-associated protein FlgK [Clostridium thermocellum
          DSM 2360]
 gi|255990811|gb|EEU00926.1| flagellar hook-associated protein FlgK [Clostridium thermocellum
          DSM 2360]
 gi|316941863|gb|ADU75897.1| flagellar hook-associated protein FlgK [Clostridium thermocellum
          DSM 1313]
          Length = 489

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 15/37 (40%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
             I  +     E+ LS    N++N +T G+   +  
Sbjct: 5  GLEIARSGMYVNERALSVTGHNVANVNTKGYARQQAM 41



 Score = 39.5 bits (90), Expect = 0.38,   Method: Composition-based stats.
 Identities = 5/39 (12%), Positives = 15/39 (38%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            +   EM  M+     +++ +  I+  +  +   I  + 
Sbjct: 447 VSMDEEMSNMMRYKFAYSASSRAINVIDDMLETIITRMG 485


>gi|146341894|ref|YP_001206942.1| flagellar basal body rod protein FlgC [Bradyrhizobium sp. ORS278]
 gi|146194700|emb|CAL78725.1| flagellar basal-body rod protein FlgC (cell-proximal rod protein)
           [Bradyrhizobium sp. ORS278]
          Length = 141

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 7/49 (14%), Positives = 19/49 (38%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
             G ++  N N + EM  M    + + +   +I    + +   +  + +
Sbjct: 93  ASGNVKYPNVNPLIEMTDMRDAQRSYEANLNIIGATRRMIQRTLDILKT 141



 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 9/56 (16%), Positives = 21/56 (37%), Gaps = 7/56 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKN 50
            S  I  +   A   R+  +++N++N D+         +R     F+  +    +
Sbjct: 9  LRSMTIATSGLRAQAGRMRVISENIANADSTAAKAGGDPYRRKVPTFTSALDRALD 64


>gi|310644334|ref|YP_003949093.1| flagellar hook-associated protein flgk [Paenibacillus polymyxa SC2]
 gi|309249285|gb|ADO58852.1| Flagellar hook-associated protein FlgK [Paenibacillus polymyxa SC2]
          Length = 522

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 6/41 (14%), Positives = 16/41 (39%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  +   EM  MI     +++    +   ++ + + I +  
Sbjct: 478 SGVSLDEEMSNMIKFQHAYSAAARFMTTFDQLLDKLINSTG 518



 Score = 37.2 bits (84), Expect = 1.9,   Method: Composition-based stats.
 Identities = 10/51 (19%), Positives = 19/51 (37%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54
          S      +       L+T   N++N +T G+    VK    +      I++
Sbjct: 7  SIETAKRSLFTQTAALNTTGHNIANANTEGYTRQTVKMKASIPMEAYGINR 57


>gi|307731356|ref|YP_003908580.1| flagellar hook-associated protein FlgK [Burkholderia sp. CCGE1003]
 gi|307585891|gb|ADN59289.1| flagellar hook-associated protein FlgK [Burkholderia sp. CCGE1003]
          Length = 657

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 27/220 (12%), Positives = 59/220 (26%), Gaps = 9/220 (4%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI---DQKIS 57
           M    N+GL+   A +  L+T   N+SN  T G+      ++E  G             +
Sbjct: 1   MSNLINLGLSGLNAAQWGLTTTGQNISNASTPGYTIETPVYAESGGQYTGSGYLPQGVST 60

Query: 58  FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSA 117
              + +           +  +    A        L +  G           +    + + 
Sbjct: 61  VTVTRQYSQYLTTQLNDAQSSSSSLATYNSLISQLNNLIGSPTAGIASAITSYFTGMQNV 120

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177
           S     L      +   Q           +     + + T    +V     + ++     
Sbjct: 121 SNNASSLATRQTAMSGAQTLANQINAAGQQYDALRQSVNTQLNNTVSQINSYTQQIAQLN 180

Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217
                 +  +      + +  L  SN      + Q+I + 
Sbjct: 181 GQINAASTQDQPPNQLLDQRDLAVSN------LSQLIGVQ 214



 Score = 36.4 bits (82), Expect = 3.7,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 13/37 (35%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N   E   ++   Q + + + +I   +      +
Sbjct: 617 SGVNINEEAANLLQYQQLYQANSKVIQTAQTLFQTLL 653


>gi|254438373|ref|ZP_05051867.1| flagellar basal-body rod protein FlgC [Octadecabacter antarcticus
           307]
 gi|198253819|gb|EDY78133.1| flagellar basal-body rod protein FlgC [Octadecabacter antarcticus
           307]
          Length = 138

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 6/36 (16%), Positives = 15/36 (41%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +   EM  M+  +++F +   ++      ML  + 
Sbjct: 100 VDVNEEMVDMLEASRQFQNNLEVVTTMRTLMLRTVN 135



 Score = 34.8 bits (78), Expect = 9.2,   Method: Composition-based stats.
 Identities = 10/28 (35%), Positives = 16/28 (57%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTD 30
            F+I   +  A   RL+TVA N++N +
Sbjct: 6  NVFDIAGRSMAAQMVRLNTVASNIANAN 33


>gi|183598623|ref|ZP_02960116.1| hypothetical protein PROSTU_02024 [Providencia stuartii ATCC
          25827]
 gi|188020803|gb|EDU58843.1| hypothetical protein PROSTU_02024 [Providencia stuartii ATCC
          25827]
          Length = 559

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 26/77 (33%), Gaps = 2/77 (2%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFV 59
              N  L+   A +  LS +++N++N     +      F E  G +  +        F 
Sbjct: 16 NNVMNNALSGVNAAQGGLSVISNNLANAGVGYYHRQSAVFGENPGTMTPNGYFGNGTYFS 75

Query: 60 ASGKEYLSKEVGSFIST 76
             +E+       +  +
Sbjct: 76 HVRREFDEFINQQYGQS 92


>gi|170743258|ref|YP_001771913.1| flagellar basal body rod protein FlgC [Methylobacterium sp. 4-46]
 gi|168197532|gb|ACA19479.1| flagellar basal-body rod protein FlgC [Methylobacterium sp. 4-46]
          Length = 136

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 6/42 (14%), Positives = 16/42 (38%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G ++  N N + E   M    + + +   ++    + +   I
Sbjct: 90  GDVQLPNVNLLVETVDMREAQRSYEANLNMVTAARRMISRTI 131



 Score = 42.5 bits (98), Expect = 0.046,   Method: Composition-based stats.
 Identities = 12/106 (11%), Positives = 29/106 (27%), Gaps = 8/106 (7%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDT----VG---FRTIKVKFSEVVGAIKN-DID 53
             +  I  +   A   R+  +++N++N D+     G   +R     F+  +    +  + 
Sbjct: 4   MKAIGIAASGLRAQSGRMRVISENIANADSEPTRAGVEPYRRKVPTFANRLDRELDARMV 63

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
                      + +K          + D  L               
Sbjct: 64  DLGRVRRDQAPFRTKHDPGNPVADAKGDVQLPNVNLLVETVDMREA 109


>gi|332140544|ref|YP_004426282.1| flagellar basal-body rod protein FlgC [Alteromonas macleodii str.
           'Deep ecotype']
 gi|327550566|gb|AEA97284.1| flagellar basal-body rod protein FlgC [Alteromonas macleodii str.
           'Deep ecotype']
          Length = 140

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 20/43 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N + EM  M+  ++ + +   + D  ++     ++
Sbjct: 93  GYIYKPNVNIVEEMANMMSASKAYETNVQVADTTKRIFRRVLQ 135



 Score = 35.6 bits (80), Expect = 5.9,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 20/55 (36%), Gaps = 6/55 (10%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKND 51
              I      A   RL+T A N++N ++V       +R     F+  +     D
Sbjct: 5  NVMQISSTGMEAENVRLNTTASNIANANSVSSSYDETYRARHPVFATALQDAMRD 59


>gi|332533178|ref|ZP_08409047.1| flagellar basal-body rod protein FlgB [Pseudoalteromonas
          haloplanktis ANT/505]
 gi|332037460|gb|EGI73914.1| flagellar basal-body rod protein FlgB [Pseudoalteromonas
          haloplanktis ANT/505]
          Length = 135

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 27/55 (49%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65
          A L   QR   +A N++N DT G++   + F+  + A ++      + V +  ++
Sbjct: 15 AMLIRSQRAELIATNIANADTPGYKAKDIDFASALKAARSTQQSGNTMVRTNDKH 69


>gi|307718595|ref|YP_003874127.1| flagellar basal-body rod protein [Spirochaeta thermophila DSM
          6192]
 gi|306532320|gb|ADN01854.1| flagellar basal-body rod protein [Spirochaeta thermophila DSM
          6192]
          Length = 138

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 8/34 (23%), Positives = 16/34 (47%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV 45
                R   +A+N++N DT  F+  ++ F   +
Sbjct: 18 MDVNLIRRQIIANNIANADTPNFKRSELNFESSL 51


>gi|167945455|ref|ZP_02532529.1| flagellar hook protein FlgE [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 188

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 9/65 (13%), Positives = 27/65 (41%), Gaps = 5/65 (7%)

Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYE 209
           +  + +   + +QG  +  ++    +     ++     T     ++ G LE+SN +   +
Sbjct: 124 LGKVAMARFNNNQGLRQVGDTRWVESFASGDVQLGEAGTSSFGLMQSGALENSNVDLAEQ 183

Query: 210 MGQMI 214
           +  +I
Sbjct: 184 LVNLI 188


>gi|330445355|ref|ZP_08309007.1| flagellar hook-associated protein FlgK [Photobacterium leiognathi
          subsp. mandapamensis svers.1.1.]
 gi|328489546|dbj|GAA03504.1| flagellar hook-associated protein FlgK [Photobacterium leiognathi
          subsp. mandapamensis svers.1.1.]
          Length = 777

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 8/47 (17%), Positives = 17/47 (36%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51
            +G++     +++L   + N+SN  T G+    V            
Sbjct: 6  MQLGISGLRTSQKQLDVTSHNISNVHTPGYSRQVVDQKAADAQWSGG 52


>gi|221639497|ref|YP_002525759.1| Flagellar proximal rod protein FlgC [Rhodobacter sphaeroides
          KD131]
 gi|221160278|gb|ACM01258.1| Flagellar proximal rod protein FlgC [Rhodobacter sphaeroides
          KD131]
          Length = 139

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 30/87 (34%), Gaps = 6/87 (6%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDT------VGFRTIKVKFSEVVGAIKNDIDQK 55
           + F++G  A  A   R++TVA N++N  T        FR ++  F              
Sbjct: 6  DSVFDVGARALSAQMVRMNTVASNLANAGTVSDKAETAFRPLRPVFETSYADAVGRTGLS 65

Query: 56 ISFVASGKEYLSKEVGSFISTGTELDF 82
           + VA       +    +     + D 
Sbjct: 66 TTDVAGVVSLDREPARVYRPDHPQADP 92



 Score = 35.2 bits (79), Expect = 7.8,   Method: Composition-based stats.
 Identities = 4/36 (11%), Positives = 13/36 (36%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +   EM +M+  ++++ +    +      M     
Sbjct: 101 VSVDEEMVEMMEASRQYQNTLEAVSTLRSLMARTAS 136


>gi|32476538|ref|NP_869532.1| flagellar hook-associated protein [Rhodopirellula baltica SH 1]
 gi|32447084|emb|CAD76893.1| probable flagellar hook-associated protein [Rhodopirellula baltica
           SH 1]
          Length = 584

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 7/51 (13%), Positives = 20/51 (39%)

Query: 188 DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           +    +++   L  +  N   E  +MI   + F + + +I    + +   +
Sbjct: 532 NDLYASLQSQHLAITGVNIDEESIKMISYQRAFQASSRVISTAAEMLDILL 582



 Score = 42.5 bits (98), Expect = 0.046,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 31/73 (42%)

Query: 11  AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
           A  A +  L  V +N++N +T G+   +++ +  V   + ++ Q     A+G   +  + 
Sbjct: 35  ALDAAQIGLQVVGNNIANANTEGYIRQRLEQTPAVAYRQGNLIQGHGVRATGVVQVIDQQ 94

Query: 71  GSFISTGTELDFA 83
            +      +   A
Sbjct: 95  LAERMFNAKTAAA 107


>gi|307718454|ref|YP_003873986.1| flagellar hook-associated protein [Spirochaeta thermophila DSM
           6192]
 gi|306532179|gb|ADN01713.1| flagellar hook-associated protein [Spirochaeta thermophila DSM
           6192]
          Length = 624

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 14/41 (34%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E+ QMI     + +    I      +   I  +A
Sbjct: 583 SGVNIDEELAQMIKFQHGYAASARFITTFNSMLDLLINRMA 623



 Score = 38.7 bits (88), Expect = 0.66,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 19/41 (46%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44
          S  IG    LA  Q L+TV  NMSN    G+   +V    +
Sbjct: 7  SIEIGKRGLLAHTQGLATVGHNMSNASVEGYSRQRVNLEAM 47


>gi|291534845|emb|CBL07957.1| flagellar hook-associated protein FlgK [Roseburia intestinalis
          M50/1]
          Length = 613

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 17/37 (45%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
             I  +   A +  L+T A+N+SN  T G+   +  
Sbjct: 7  GLTIASSGLSAYQVALNTSANNISNVQTKGYSKQQAN 43


>gi|302874586|ref|YP_003843219.1| flagellar basal-body rod protein FlgB [Clostridium cellulovorans
          743B]
 gi|307690803|ref|ZP_07633249.1| flagellar basal body rod protein FlgB [Clostridium cellulovorans
          743B]
 gi|302577443|gb|ADL51455.1| flagellar basal-body rod protein FlgB [Clostridium cellulovorans
          743B]
          Length = 129

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
            A+  R   VA+N++N +T GF+   V F E +     DI
Sbjct: 16 LDAVAIRNRVVANNIANINTKGFKRQYVSFEEQLKKSVKDI 56


>gi|240145382|ref|ZP_04743983.1| flagellar hook-associated protein FlgK [Roseburia intestinalis
          L1-82]
 gi|257202503|gb|EEV00788.1| flagellar hook-associated protein FlgK [Roseburia intestinalis
          L1-82]
          Length = 613

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 17/37 (45%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
             I  +   A +  L+T A+N+SN  T G+   +  
Sbjct: 7  GLTIASSGLSAYQVALNTSANNISNVQTKGYSKQQAN 43


>gi|225181614|ref|ZP_03735055.1| flagellar basal-body rod protein FlgB [Dethiobacter alkaliphilus
          AHT 1]
 gi|225167722|gb|EEG76532.1| flagellar basal-body rod protein FlgB [Dethiobacter alkaliphilus
          AHT 1]
          Length = 137

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 10/71 (14%), Positives = 23/71 (32%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
             A  +R   +A N++N +T  F+   V F + +        +        +    ++ 
Sbjct: 16 GLDAAGERNRVMAHNVANVNTPMFKRQDVSFEKQLRQALAAPSRLPLATTHERHVGGQKS 75

Query: 71 GSFISTGTELD 81
             +      D
Sbjct: 76 LQDVGHKVSTD 86


>gi|332305613|ref|YP_004433464.1| flagellar basal-body rod protein FlgC [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332172942|gb|AEE22196.1| flagellar basal-body rod protein FlgC [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 140

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 20/43 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N + EM  M+  ++ + +   + D  ++     +R
Sbjct: 93  GYIYKPNVNIVEEMADMMSASKAYETNVQVADTTKRLFRNVLR 135



 Score = 39.9 bits (91), Expect = 0.35,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 27/84 (32%), Gaps = 6/84 (7%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56
             +I      A   RL+T A N++N ++V       ++     F+  +     D +   
Sbjct: 5  NVMDIASTGMSAQSVRLNTTASNVANANSVSSSYDQTYKARHPVFAAELQRASQDQNAGT 64

Query: 57 SFVASGKEYLSKEVGSFISTGTEL 80
               G       +    S G  +
Sbjct: 65 GVQVLGVVESQAPLQIEYSPGHPM 88


>gi|315186392|gb|EFU20152.1| flagellar basal-body rod protein FlgB [Spirochaeta thermophila
          DSM 6578]
          Length = 138

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 8/34 (23%), Positives = 16/34 (47%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV 45
                R   +A+N++N DT  F+  ++ F   +
Sbjct: 18 MDVNLIRRQIIANNIANADTPNFKRSELNFESSL 51


>gi|222100201|ref|YP_002534769.1| Flagellar basal-body rod protein FlgB [Thermotoga neapolitana DSM
           4359]
 gi|221572591|gb|ACM23403.1| Flagellar basal-body rod protein FlgB [Thermotoga neapolitana DSM
           4359]
          Length = 137

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 18/125 (14%), Positives = 35/125 (28%), Gaps = 8/125 (6%)

Query: 1   MQTS-FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK------NDID 53
           M  S F     A      R    + N++N  T G++   V F E +   K         +
Sbjct: 11  MFNSNFYTLKQAMDVSLLRQKIHSLNIANVSTPGYKRKYVAFEEFLKESKMRLELARTSE 70

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFAL-EGDAWFALESPRGIILTRDGRFKVTDDG 112
           + +       E                +  +            R  +LTR     +    
Sbjct: 71  KHLGGSQRVVEPRVLTQNDTTMRNDGNNVDIDYEMVQLVKNGLRYQVLTRLMSMNIDRYN 130

Query: 113 SLVSA 117
           +++ +
Sbjct: 131 AVLRS 135


>gi|254511786|ref|ZP_05123853.1| flagellar hook-associated protein FlgK [Rhodobacteraceae
          bacterium KLH11]
 gi|221535497|gb|EEE38485.1| flagellar hook-associated protein FlgK [Rhodobacteraceae
          bacterium KLH11]
          Length = 483

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 19/40 (47%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
          M T+ N  L    A  +  + V+ N++N  T G+    ++
Sbjct: 3  MSTALNNALGGLNAASRGAAVVSGNIANALTPGYARRTLE 42


>gi|206603517|gb|EDZ39997.1| Flagellar hook-associated protein (FlgK) [Leptospirillum sp.
          Group II '5-way CG']
          Length = 561

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 1/57 (1%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           NIG +   A E  LST   N+SN +T G+    V+F +             + V +
Sbjct: 8  LNIGKSGIEANEAGLSTAGQNISNVNTPGYTVENVQF-DQTQPNHGSPGMVGNGVRA 63


>gi|312879580|ref|ZP_07739380.1| flagellar basal-body rod protein FlgB [Aminomonas paucivorans DSM
           12260]
 gi|310782871|gb|EFQ23269.1| flagellar basal-body rod protein FlgB [Aminomonas paucivorans DSM
           12260]
          Length = 134

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 15/98 (15%), Positives = 31/98 (31%)

Query: 12  QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
              L +R+ +   N++N +T  +   +V F + + A+     +    V  G    +   G
Sbjct: 14  LEGLSRRMGSTTQNLANANTPKYVRREVSFEDQLEALIEAPRRLPLAVTDGHHMTNMPKG 73

Query: 72  SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109
                  E     E   +          L R    ++ 
Sbjct: 74  IEFVHPVESRVGNEVYRYDENNVDPETELARLAETRMM 111


>gi|317153861|ref|YP_004121909.1| flagellar basal body rod protein [Desulfovibrio aespoeensis Aspo-2]
 gi|316944112|gb|ADU63163.1| flagellar basal body rod protein [Desulfovibrio aespoeensis Aspo-2]
          Length = 108

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 19/46 (41%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G +E SN +   EM  MI     F++    +  +E      +  IA
Sbjct: 63  GGVEGSNTDIGTEMVGMIRTGHAFSANVAAVRASEDMTGHLLNMIA 108



 Score = 42.5 bits (98), Expect = 0.053,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 17/48 (35%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54
            L+A  AL       A+N++N +T GF    V            +  
Sbjct: 4  TNLSALSALSTVQQVSANNIANVNTDGFSASSVTLESGPADQGVRVGS 51


>gi|224825783|ref|ZP_03698887.1| flagellar hook-associated protein FlgK [Lutiella nitroferrum
          2002]
 gi|224602007|gb|EEG08186.1| flagellar hook-associated protein FlgK [Lutiella nitroferrum
          2002]
          Length = 457

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 23/53 (43%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54
                 L+  +A +  L+TV+ N+SN  T G+    V  S +V    + +  
Sbjct: 1  MRMIQNALSGAIAAQAALNTVSQNLSNEMTPGYSRQGVLLSTLVPGAGDRLGA 53


>gi|167948873|ref|ZP_02535947.1| Flagellar basal-body rod protein FlgB [Endoriftia persephone
          'Hot96_1+Hot96_2']
          Length = 127

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 21/42 (50%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          A L   +R   +A N++N DT G++     F +V+   + + 
Sbjct: 11 ALLLRARRSELIASNLANADTPGYKARDFDFHKVLQQAQGEP 52


>gi|115523177|ref|YP_780088.1| flagellar basal body rod protein FlgC [Rhodopseudomonas palustris
           BisA53]
 gi|115517124|gb|ABJ05108.1| flagellar basal-body rod protein FlgC [Rhodopseudomonas palustris
           BisA53]
          Length = 138

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 31/103 (30%), Gaps = 8/103 (7%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKF-SEVVGAIKNDIDQK 55
           S  I  +       RL  V++N++N ++ G       +R     F +E+  A    + + 
Sbjct: 8   SIQIASSGLEVQSTRLRVVSENLANANSTGRAPGAEPYRRKTTTFAAEMDRAQGVRVVKV 67

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98
                    +  +   S  +   +    L         +    
Sbjct: 68  KDVGVDRTPFRVEYEPSHPAADQDGYVKLPNVNTLIEMADMRE 110



 Score = 41.0 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 12/98 (12%), Positives = 31/98 (31%)

Query: 145 KGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNA 204
            G    + K                V+ ++ G+         E       + G+++  N 
Sbjct: 40  PGAEPYRRKTTTFAAEMDRAQGVRVVKVKDVGVDRTPFRVEYEPSHPAADQDGYVKLPNV 99

Query: 205 NSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           N++ EM  M    + + +   ++ +    +   I  + 
Sbjct: 100 NTLIEMADMRETNRSYEANLQVVKQARSMVSMTIDMLR 137


>gi|285018211|ref|YP_003375922.1| flagellar basal body rod protein [Xanthomonas albilineans GPE PC73]
 gi|283473429|emb|CBA15934.1| probable flagellar basal body rod protein [Xanthomonas albilineans]
          Length = 135

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 4/43 (9%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   + + + +M  +I  ++ + +   +++  ++  L  + 
Sbjct: 90  GYIYSPDIDPVSQMVNLISASRNYQAGVEVLNTAKELALSTLT 132



 Score = 39.5 bits (90), Expect = 0.43,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 6/46 (13%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEV 44
          F++  +A  A   R+ST+A N++N D+V       ++ I+  F  V
Sbjct: 7  FDVAGSALQAQSVRMSTIASNLANADSVAGSAEAAYKPIEPIFQAV 52


>gi|114566382|ref|YP_753536.1| hypothetical protein Swol_0846 [Syntrophomonas wolfei subsp.
          wolfei str. Goettingen]
 gi|114337317|gb|ABI68165.1| conserved hypothetical protein [Syntrophomonas wolfei subsp.
          wolfei str. Goettingen]
          Length = 138

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 25/64 (39%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A      R   +ADN++N DT  F+  +V F E +         ++    +   ++  E 
Sbjct: 17 AMDVGTLRNDVIADNIANADTPKFKRREVIFEEKMKKALEGTTDQLGLNLTNSRHIQMEG 76

Query: 71 GSFI 74
           +  
Sbjct: 77 NNMD 80


>gi|302338074|ref|YP_003803280.1| flagellar basal-body rod protein FlgB [Spirochaeta smaragdinae
          DSM 11293]
 gi|301635259|gb|ADK80686.1| flagellar basal-body rod protein FlgB [Spirochaeta smaragdinae
          DSM 11293]
          Length = 138

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 10/67 (14%), Positives = 19/67 (28%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          +      R   +A+N++N DT  ++   V F   +    +         A   E      
Sbjct: 17 SMDVEMLRRQVMANNIANADTPNYKRSVVNFESQLARALDSEKVTKPQAALTNERHIPFN 76

Query: 71 GSFISTG 77
                 
Sbjct: 77 RVQNYRD 83


>gi|254504553|ref|ZP_05116704.1| flagellar hook-associated protein FlgK [Labrenzia alexandrii
          DFL-11]
 gi|222440624|gb|EEE47303.1| flagellar hook-associated protein FlgK [Labrenzia alexandrii
          DFL-11]
          Length = 631

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 20/48 (41%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50
          ++ N  +      ++++   A N++N DT G+    V  +       N
Sbjct: 5  SALNTAVFGISFNQRQIDVTASNIANADTAGYSKKTVSANAYFDGDGN 52



 Score = 37.5 bits (85), Expect = 1.7,   Method: Composition-based stats.
 Identities = 6/36 (16%), Positives = 14/36 (38%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            N   EM  ++ L   +++   ++      M E + 
Sbjct: 593 VNLDAEMAFLVQLENAYSANARVMQTINDLMQELLN 628


>gi|218679061|ref|ZP_03526958.1| hypothetical protein RetlC8_09354 [Rhizobium etli CIAT 894]
          Length = 101

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 20/39 (51%)

Query: 6  NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44
          N  L+   A   R+  +A+N++N+ T G+  +    + V
Sbjct: 8  NTALSGMRAQTTRIGAIANNVANSSTSGYARLNTSLTSV 46


>gi|206896029|ref|YP_002246681.1| flagellar basal-body rod protein FlgC [Coprothermobacter
           proteolyticus DSM 5265]
 gi|206738646|gb|ACI17724.1| flagellar basal-body rod protein FlgC [Coprothermobacter
           proteolyticus DSM 5265]
          Length = 134

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 16/114 (14%), Positives = 31/114 (27%), Gaps = 6/114 (5%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDIDQKI 56
           +   I  +A  A   R+  ++ N++N +T     G  +    V F  ++         K+
Sbjct: 5   SLLRIAGSALTAQRFRMDVISSNIANLETTRTPEGGPYHRKIVSFQSMMVGENQGQGVKV 64

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTD 110
           + +            S      E       D     E    +   R        
Sbjct: 65  AQLTEDPSERLVYDPSHPDADPETGMVHYPDMDLITELTDLMSAQRSFEMNSNA 118



 Score = 40.2 bits (92), Expect = 0.27,   Method: Composition-based stats.
 Identities = 11/123 (8%), Positives = 29/123 (23%), Gaps = 1/123 (0%)

Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171
           G  +       +         I             E     + I +     V  +QG   
Sbjct: 3   GFSLLRIAGSALTAQRFRMDVISSNIANLETTRTPEGGPYHRKIVSFQSMMVGENQGQGV 62

Query: 172 RENSGISPNIPPTPLEDL-SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
           +              +        + G +   + + + E+  ++   + F   +  I   
Sbjct: 63  KVAQLTEDPSERLVYDPSHPDADPETGMVHYPDMDLITELTDLMSAQRSFEMNSNAIAIA 122

Query: 231 EKS 233
            + 
Sbjct: 123 RQV 125


>gi|203284102|ref|YP_002221842.1| flagellar hook-associated protein [Borrelia duttonii Ly]
 gi|201083545|gb|ACH93136.1| flagellar hook-associated protein [Borrelia duttonii Ly]
          Length = 627

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 17/41 (41%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E+  MI   Q F + +  I+ + + +   I  + 
Sbjct: 586 SGVNKDEELANMIEFQQSFIAASKFINVSAELIDTIINKMG 626


>gi|16799793|ref|NP_470061.1| flagellar basal body rod protein FlgB [Listeria innocua
          Clip11262]
 gi|16413170|emb|CAC95950.1| lin0718 [Listeria innocua Clip11262]
 gi|313620053|gb|EFR91568.1| flagellar basal-body rod protein FlgB [Listeria innocua FSL
          S4-378]
          Length = 133

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 18/44 (40%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK 55
             L+     V++N++N +T  F+  +  F E  GA        
Sbjct: 12 LNYLQTANQVVSNNIANANTPNFKASEASFEESFGASLRASGSN 55


>gi|157736472|ref|YP_001489155.1| flagellar hook-associated protein FlgK [Arcobacter butzleri
          RM4018]
 gi|157698326|gb|ABV66486.1| flagellar hook-associated protein FlgK [Arcobacter butzleri
          RM4018]
          Length = 636

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 31/78 (39%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
          FN+      A    + TV++N++N DT G++      SE+     +   + ++     + 
Sbjct: 7  FNVAQTGLSASRYGIETVSNNIANKDTDGYKKRVTDLSEIGQMGSSITGRGVNVDGVSRV 66

Query: 65 YLSKEVGSFISTGTELDF 82
                 ++    T+  +
Sbjct: 67 TSQYLYDNYTKEYTKTSY 84



 Score = 40.6 bits (93), Expect = 0.19,   Method: Composition-based stats.
 Identities = 4/35 (11%), Positives = 15/35 (42%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            +   EM  ++ L   +++   +I   ++ +   +
Sbjct: 598 VDEDDEMVNLMKLQAAYSANAQMITAVDEMIKVIL 632


>gi|148261124|ref|YP_001235251.1| flagellar basal body rod protein FlgC [Acidiphilium cryptum JF-5]
 gi|326404525|ref|YP_004284607.1| flagellar basal-body rod protein FlgC [Acidiphilium multivorum
           AIU301]
 gi|146402805|gb|ABQ31332.1| flagellar basal-body rod protein FlgC [Acidiphilium cryptum JF-5]
 gi|325051387|dbj|BAJ81725.1| flagellar basal-body rod protein FlgC [Acidiphilium multivorum
           AIU301]
          Length = 134

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 40/119 (33%)

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                D     I     +        G    + K I+   ++S       V+  N G   
Sbjct: 13  GLSAQDARLQVIAQNLANADSTGSTPGSNPYQRKTISFQDVFSQTTGTDLVQVANIGKDT 72

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
              P   +  +     +G+++  N NS+ E+  M    + +++  ++++     M   +
Sbjct: 73  APFPMKYDPSNPAANAQGYVKLPNVNSLVELMDMQQAERSYDANLSVMNATRGMMTRTL 131



 Score = 43.7 bits (101), Expect = 0.023,   Method: Composition-based stats.
 Identities = 16/126 (12%), Positives = 32/126 (25%), Gaps = 11/126 (8%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKN----DID 53
            +I  A   A + RL  +A N++N D+ G       ++   + F +V           + 
Sbjct: 7   LDITAAGLSAQDARLQVIAQNLANADSTGSTPGSNPYQRKTISFQDVFSQTTGTDLVQVA 66

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113
                 A           +  + G      +                  +        G 
Sbjct: 67  NIGKDTAPFPMKYDPSNPAANAQGYVKLPNVNSLVELMDMQQAERSYDANLSVMNATRGM 126

Query: 114 LVSASG 119
           +    G
Sbjct: 127 MTRTLG 132


>gi|283853239|ref|ZP_06370490.1| flagellar basal-body rod protein FlgC [Desulfovibrio sp. FW1012B]
 gi|283571344|gb|EFC19353.1| flagellar basal-body rod protein FlgC [Desulfovibrio sp. FW1012B]
          Length = 146

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 25/71 (35%), Gaps = 6/71 (8%)

Query: 168 GFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
           G V           P  P  +        G++   + N + EM  MI   + + + ++ I
Sbjct: 78  GLVNDNRPFRMQYEPGHPDANAD------GYVAYPDINVVEEMANMITAMRSYEASSSSI 131

Query: 228 DENEKSMLEAI 238
              +    +A+
Sbjct: 132 GTVKNMFTKAL 142



 Score = 38.3 bits (87), Expect = 0.86,   Method: Composition-based stats.
 Identities = 9/34 (26%), Positives = 18/34 (52%), Gaps = 2/34 (5%)

Query: 1  MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTV 32
          M   T+ +IG +   A    ++T++ N++N  T 
Sbjct: 1  MDLFTALDIGSSGMSAQRTLMNTISMNLANIKTT 34


>gi|254434266|ref|ZP_05047774.1| flagellar basal-body rod protein FlgB [Nitrosococcus oceani AFC27]
 gi|207090599|gb|EDZ67870.1| flagellar basal-body rod protein FlgB [Nitrosococcus oceani AFC27]
          Length = 148

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 10/94 (10%), Positives = 29/94 (30%)

Query: 16  EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIS 75
            +R   +A N++N DT G++   + F   +   +       +  A    +   +     +
Sbjct: 37  SRRAEVLAANLANGDTPGYKARDIDFKAALQQAQGQGLPLQATHAGHVSHSLGQFPGGEA 96

Query: 76  TGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109
                  A         +      +    +++ +
Sbjct: 97  LYRIPQQASLDGNTVDSQVEHSEFMQNALQYQAS 130


>gi|313634367|gb|EFS00963.1| flagellar hook-associated protein FlgK [Listeria seeligeri FSL
           N1-067]
          Length = 479

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 16/126 (12%), Positives = 34/126 (26%), Gaps = 3/126 (2%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
           FN  L+   A +        N+SN +T G+    V    +          K +       
Sbjct: 6   FNTSLSGMSAAQIANMVAQQNISNMNTPGYIRQAVDQQALYSDGGLLGGNKQTGYGVKVT 65

Query: 65  YLSKEVGSFISTGTELDFALEGDAWFAL---ESPRGIILTRDGRFKVTDDGSLVSASGKY 121
            + +     ++T      A +  + +          +  T        +  +  +A G  
Sbjct: 66  DIKRLTNVALTTQYNNQIAKQSASLYESGALNQALNLFGTPGKNTPSDNLDNFFTAWGAL 125

Query: 122 PVLDMA 127
                 
Sbjct: 126 AKNPDQ 131


>gi|295678051|ref|YP_003606575.1| flagellar hook-associated protein FlgK [Burkholderia sp.
          CCGE1002]
 gi|295437894|gb|ADG17064.1| flagellar hook-associated protein FlgK [Burkholderia sp.
          CCGE1002]
          Length = 664

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 29/80 (36%), Gaps = 1/80 (1%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
             NIGL+   A +  L+T  +N+SN  T G+      FSE VG            V++ 
Sbjct: 4  NLLNIGLSGLNAAQWGLTTTGENISNASTPGYTMETPVFSE-VGGNYTGSGYLPMGVSTD 62

Query: 63 KEYLSKEVGSFISTGTELDF 82
              +          T   +
Sbjct: 63 TVTRAYSQYLTTELNTAQSW 82



 Score = 38.3 bits (87), Expect = 0.99,   Method: Composition-based stats.
 Identities = 13/122 (10%), Positives = 34/122 (27%), Gaps = 6/122 (4%)

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           A G    +   +      +  ++ +   K ++   G    T    S   + G    +   
Sbjct: 545 ADGDSFTIGPNTGATNDGRNAQLLSNLTKAQVLAGGTATLTNAYASYVNNIGNQATQIQA 604

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           ++        +  S      G       N   E   ++   Q + + + +I   +     
Sbjct: 605 MATTQTSLVTQITSAQQSVSG------VNINEEAANLLQYQQLYQANSKVIQTAQTLFQT 658

Query: 237 AI 238
            +
Sbjct: 659 LL 660


>gi|220917708|ref|YP_002493012.1| flagellar hook-associated protein FlgK [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219955562|gb|ACL65946.1| flagellar hook-associated protein FlgK [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 469

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 5/38 (13%), Positives = 17/38 (44%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            S  +   E+ +M    + +++I+ +I  + +     +
Sbjct: 429 ASGVSVDEELLEMEKAQRAYDAISKVIQASSEMFDTLL 466



 Score = 36.0 bits (81), Expect = 5.0,   Method: Composition-based stats.
 Identities = 5/43 (11%), Positives = 13/43 (30%)

Query: 24 DNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66
           N+ N +T G+   +   +  + A +             +   
Sbjct: 27 HNLQNANTPGYARQRAVLATTLPAQQAGGAWIGRGATLAQVTQ 69


>gi|451871|gb|AAB59019.1| flagellar hook-filament junction protein [Bacillus subtilis]
          Length = 129

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 35/92 (38%), Gaps = 2/92 (2%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS--EVVGAIKNDIDQKISFVAS 61
                 A  A +  LST A+N++N +T G+   +V     +   A+  + ++    + +
Sbjct: 7  GLETARRALSAQQAALSTTANNVANANTDGYTRQRVSLEATDYFPAVSKNAEKTAGQMGT 66

Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALE 93
          G +  S E    I    +         ++  +
Sbjct: 67 GVQGKSVERIRDIFLDYQYRLQNNSAGYYDTK 98


>gi|188991643|ref|YP_001903653.1| flagellar basal body rod protein FlgC [Xanthomonas campestris pv.
           campestris str. B100]
 gi|167733403|emb|CAP51604.1| unnamed protein product [Xanthomonas campestris pv. campestris]
          Length = 135

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 5/43 (11%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   + + + +M  MI  ++ + +   +++  ++  L  + 
Sbjct: 90  GYVFSPDVDPVSQMVNMISASRNYQAGVEMLNTAKELALATLT 132



 Score = 35.6 bits (80), Expect = 6.5,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 31/84 (36%), Gaps = 8/84 (9%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKISF 58
          F++  +A  A   RLST+A N++N D+V       ++ I+  F       + D       
Sbjct: 7  FDVAGSALHAQSVRLSTIASNLANADSVAGSAEATYKPIEPIFQA--QQNRQDPSLTSVN 64

Query: 59 VASGKEYLSKEVGSFISTGTELDF 82
          V       +  +  +       D 
Sbjct: 65 VKEITTTNAPPIRRYEPGHPLADA 88


>gi|163939550|ref|YP_001644434.1| flagellar basal body rod protein FlgC [Bacillus
          weihenstephanensis KBAB4]
 gi|229132557|ref|ZP_04261406.1| Flagellar basal-body rod protein FlgC [Bacillus cereus
          BDRD-ST196]
 gi|163861747|gb|ABY42806.1| flagellar basal-body rod protein FlgC [Bacillus
          weihenstephanensis KBAB4]
 gi|228650903|gb|EEL06889.1| Flagellar basal-body rod protein FlgC [Bacillus cereus
          BDRD-ST196]
          Length = 137

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 6/33 (18%), Positives = 14/33 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG 33
          M  + N   +      + +   ++N+ N +T G
Sbjct: 1  MFQAINASGSGLTTARKWMEVTSNNIVNANTTG 33



 Score = 43.7 bits (101), Expect = 0.023,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 22/40 (55%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           G++   N +   EM  ++   + + + T++++ N+K + +
Sbjct: 91  GYVRYPNIDVTAEMTNVMVAQKMYEANTSVLNANKKMLDK 130


>gi|332669187|ref|YP_004452195.1| flagellar basal-body rod protein FlgB [Cellulomonas fimi ATCC
          484]
 gi|332338225|gb|AEE44808.1| flagellar basal-body rod protein FlgB [Cellulomonas fimi ATCC
          484]
          Length = 115

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 39/91 (42%), Gaps = 1/91 (1%)

Query: 2  QTSFNIGL-AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           +   + L +A   L  R  ++ADN++N  T GF   +V+F + +       D  +    
Sbjct: 5  DSVSFVALNSALDGLALRQRSIADNVANIQTPGFHARRVRFEDELTRAVAHGDGAVQAST 64

Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFA 91
          S     ++E G+ ++   E    ++ +  + 
Sbjct: 65 SRSLEPTRENGNNVNLDAETLLNIDTNLRYQ 95


>gi|327543408|gb|EGF29832.1| flagellar hook-associated protein FlgK [Rhodopirellula baltica
           WH47]
          Length = 562

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 7/51 (13%), Positives = 20/51 (39%)

Query: 188 DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           +    +++   L  +  N   E  +MI   + F + + +I    + +   +
Sbjct: 510 NDLYASLQSQHLAITGVNIDEESIKMISYQRAFQASSRVISTAAEMLDILL 560



 Score = 42.5 bits (98), Expect = 0.050,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 31/73 (42%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A  A +  L  V +N++N +T G+   +++ +  V   + ++ Q     A+G   +  + 
Sbjct: 13 ALDAAQIGLQVVGNNIANANTEGYIRQRLEQTPAVAYRQGNLIQGHGVRATGVVQVIDQQ 72

Query: 71 GSFISTGTELDFA 83
           +      +   A
Sbjct: 73 LAERMFNAKTAAA 85


>gi|218778520|ref|YP_002429838.1| flagellar basal-body rod protein FlgC [Desulfatibacillum
           alkenivorans AK-01]
 gi|218759904|gb|ACL02370.1| Flagellar basal-body rod protein FlgC [Desulfatibacillum
           alkenivorans AK-01]
          Length = 142

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 19/42 (45%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G L+  N N + EM  M+   + ++S    +       L+A+
Sbjct: 97  GNLQLPNVNVVTEMANMLMAKRVYDSNAAALSTARSMALKAL 138



 Score = 40.6 bits (93), Expect = 0.21,   Method: Composition-based stats.
 Identities = 6/34 (17%), Positives = 17/34 (50%), Gaps = 2/34 (5%)

Query: 1  MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTV 32
          M    + +   +A      +++ V++N++N +T 
Sbjct: 1  MDLLNAMHASASALSVSRAQMNVVSENLANANTT 34


>gi|21231399|ref|NP_637316.1| flagellar basal body rod protein FlgC [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66768548|ref|YP_243310.1| flagellar basal body rod protein FlgC [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|21113065|gb|AAM41240.1| flagellar biosynthesis, cell-proximal portion of basal-body rod
           [Xanthomonas campestris pv. campestris str. ATCC 33913]
 gi|66573880|gb|AAY49290.1| flagellar biosynthesis, cell-proximal portion of basal-body rod
           [Xanthomonas campestris pv. campestris str. 8004]
          Length = 135

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 5/43 (11%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   + + + +M  MI  ++ + +   +++  ++  L  + 
Sbjct: 90  GYVFSPDVDPVSQMVNMISASRNYQAGVEMLNTAKELALATLT 132


>gi|332284016|ref|YP_004415927.1| flagellar basal body rod protein FlgB [Pusillimonas sp. T7-7]
 gi|330427969|gb|AEC19303.1| flagellar basal body rod protein FlgB [Pusillimonas sp. T7-7]
          Length = 137

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 8/46 (17%), Positives = 18/46 (39%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK 55
           A    ++R   +A N++N DT  ++     F+  +    +     
Sbjct: 14 TALALRQKRQEVLAANIANADTPNYKARDFDFTAALNQAMDGGGSM 59


>gi|322806996|emb|CBZ04566.1| flagellar basal-body rod protein FlgC [Clostridium botulinum
          H04402 065]
          Length = 77

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 20/50 (40%), Gaps = 9/50 (18%)

Query: 1  MQTSFNI---GLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKF 41
          M  +F+      +   A   R+ T+A N++N  T     G  ++     F
Sbjct: 1  MIKAFDTMRISASGLSAERLRMDTIASNIANATTTRTENGGPYKRKIAVF 50


>gi|197120116|ref|YP_002140543.1| flagellar hook-associated protein FlgK [Geobacter bemidjiensis Bem]
 gi|197089476|gb|ACH40747.1| flagellar hook-associated protein FlgK [Geobacter bemidjiensis Bem]
          Length = 482

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 17/102 (16%), Positives = 33/102 (32%), Gaps = 2/102 (1%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--IDQKISFVASG 62
           F+I  +   A    +    +N++N +T G+   +V          N   +   +   A  
Sbjct: 7   FDIASSGVTAQRLAIEVTGENIANVNTDGYSRQQVIMENKPVTTANGFPLGTGVQIGAVQ 66

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDG 104
           + Y +      ++  +     L          P    LT DG
Sbjct: 67  RTYDNMLQLQQVNGNSSYQENLAKQTALEQIQPSFNELTSDG 108



 Score = 40.6 bits (93), Expect = 0.17,   Method: Composition-based stats.
 Identities = 20/146 (13%), Positives = 37/146 (25%), Gaps = 11/146 (7%)

Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162
            G       G    +      L    V   +P           G      + +A +G  S
Sbjct: 334 TGNNFFNPAGLTAGSIALDGALTGTKVAAALPVVPTDPIPTSSGNNLNALQFVA-LGNQS 392

Query: 163 VDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGF--------LEDSN--ANSMYEMGQ 212
           V  + G     N+  S         + +     +G         L  SN   +   E+  
Sbjct: 393 VPFTTGNASFVNNYNSLVSQVGVDTEGTQNVASQGASFLKQLSALRSSNSEVSLDEELTN 452

Query: 213 MIHLTQKFNSITTLIDENEKSMLEAI 238
           +    + F     +I      +   +
Sbjct: 453 LTKYQRAFQGSAKVISAATDMLDTVL 478


>gi|116872099|ref|YP_848880.1| flagellar basal body rod protein FlgB [Listeria welshimeri
          serovar 6b str. SLCC5334]
 gi|116740977|emb|CAK20097.1| flagellar basal-body rod protein FlgB [Listeria welshimeri
          serovar 6b str. SLCC5334]
          Length = 133

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 18/42 (42%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
             L+     V++N++N +T  F+  +  F E  G+      
Sbjct: 12 LNYLQTANQVVSNNIANANTPNFKASEASFEESFGSSLRASG 53


>gi|218887373|ref|YP_002436694.1| flagellar basal body rod protein FlgB [Desulfovibrio vulgaris
          str. 'Miyazaki F']
 gi|218758327|gb|ACL09226.1| flagellar basal-body rod protein FlgB [Desulfovibrio vulgaris
          str. 'Miyazaki F']
          Length = 136

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 10/68 (14%), Positives = 24/68 (35%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
               QR + V  N++N  T G++  +++F + + +      +            S+   
Sbjct: 16 MDMQLQRQNVVMSNIANVRTPGYKPRELEFEKQLQSALGLDAKGRMTRTEQNHLPSEFSA 75

Query: 72 SFISTGTE 79
             +   E
Sbjct: 76 DGFNADWE 83


>gi|30248328|ref|NP_840398.1| flagella basal body rod protein [Nitrosomonas europaea ATCC 19718]
 gi|30138214|emb|CAD84222.1| Flagella basal body rod protein [Nitrosomonas europaea ATCC 19718]
          Length = 466

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 16/127 (12%), Positives = 33/127 (25%), Gaps = 2/127 (1%)

Query: 1   MQTS-FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFV 59
           M     N+G++   A +  L T + N+SN  T G+   +         + N        V
Sbjct: 1   MANGIMNVGVSGLRAAQVALLTTSHNISNATTPGYNRQQAI-QSASTPLANSDGFIGRGV 59

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119
                           +      + + D+ +        +L            +  +A  
Sbjct: 60  QITTVQRIYNQHLVSQSLQAQSQSSQLDSHYNEIKQIDNLLADTTSGLTPALHNFFNAVQ 119

Query: 120 KYPVLDM 126
                  
Sbjct: 120 DVASNPA 126


>gi|320538492|ref|ZP_08038355.1| flagellar hook-associated protein FlgK [Treponema phagedenis F0421]
 gi|320144663|gb|EFW36416.1| flagellar hook-associated protein FlgK [Treponema phagedenis F0421]
          Length = 625

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 14/41 (34%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E+  +I     +N+    I    + +   I  + 
Sbjct: 584 SGVNIDEELSDIIKFQHGYNASARFIATVNEMLDTIINRMG 624



 Score = 38.7 bits (88), Expect = 0.81,   Method: Composition-based stats.
 Identities = 14/110 (12%), Positives = 31/110 (28%), Gaps = 8/110 (7%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDIDQKISFVA 60
           S  +G  +  A +Q + T   N++N+ T G+   +V    F  +     +  +       
Sbjct: 6   SIELGKRSLFAHKQSVQTAGHNVANSSTPGYTRQRVNLDAFEPLYRPDLSRAETPGQIGQ 65

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTD 110
                              LD  + G ++            +       +
Sbjct: 66  GVTIG-----SIVRLRDELLDQRIVGQSYDYGYWNTRDPYVQLLEQVYNE 110


>gi|253702425|ref|YP_003023614.1| flagellar hook-associated protein FlgK [Geobacter sp. M21]
 gi|251777275|gb|ACT19856.1| flagellar hook-associated protein FlgK [Geobacter sp. M21]
          Length = 480

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 33/102 (32%), Gaps = 2/102 (1%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--IDQKISFVASG 62
           F+I  +   A    +    +N++N +T G+   +V          N   +   +   A  
Sbjct: 7   FDIASSGVTAQRLAIEVTGENIANVNTEGYSRQQVIMETKPVTTANGFPLGTGVQIAAVQ 66

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDG 104
           + Y +      ++  +     L          P    +T DG
Sbjct: 67  RTYDNMLQLQMVNGNSSYQENLAKQTALEQIQPSFNEVTADG 108



 Score = 39.9 bits (91), Expect = 0.31,   Method: Composition-based stats.
 Identities = 12/122 (9%), Positives = 29/122 (23%), Gaps = 4/122 (3%)

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175
           + +G      ++     +P      N  +   +  +     T     V+     V +   
Sbjct: 354 TLTGVKVAAALSVPTDPVPSSGNNLNALQLAALGNQSVPFTTGNASFVNNYNSLVSQVGV 413

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSN--ANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
                             +    L  SN   +   E+  +    + F     +I      
Sbjct: 414 DTEGTQNVAGQGASFLKQL--NALRSSNSEVSLDEELTNLTKYQRAFQGSAKVISAATDM 471

Query: 234 ML 235
           + 
Sbjct: 472 LD 473


>gi|123442787|ref|YP_001006764.1| flagellar basal body rod protein FlgB [Yersinia enterocolitica
          subsp. enterocolitica 8081]
 gi|332161319|ref|YP_004297896.1| flagellar basal body rod protein FlgB [Yersinia enterocolitica
          subsp. palearctica 105.5R(r)]
 gi|2494519|sp|Q56893|FLGB_YEREN RecName: Full=Flagellar basal-body rod protein flgB
 gi|793898|emb|CAA88192.1| flgB [Yersinia enterocolitica]
 gi|122089748|emb|CAL12601.1| flagellar basal-body rod protein FlgB [Yersinia enterocolitica
          subsp. enterocolitica 8081]
 gi|318605239|emb|CBY26737.1| flagellar basal-body rod protein FlgB [Yersinia enterocolitica
          subsp. palearctica Y11]
 gi|325665549|gb|ADZ42193.1| flagellar basal body rod protein FlgB [Yersinia enterocolitica
          subsp. palearctica 105.5R(r)]
          Length = 137

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 24/65 (36%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   ++ N++N DT GF+   + FS  +  +        + V+          
Sbjct: 15 ALNLRAQRQEILSSNIANADTPGFQARDIDFSSQLKKVMEQGRASGTGVSLSLTSARHIP 74

Query: 71 GSFIS 75
           S + 
Sbjct: 75 ASTVQ 79


>gi|298530645|ref|ZP_07018047.1| flagellar basal-body rod protein FlgC [Desulfonatronospira
          thiodismutans ASO3-1]
 gi|298510019|gb|EFI33923.1| flagellar basal-body rod protein FlgC [Desulfonatronospira
          thiodismutans ASO3-1]
          Length = 146

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 9/31 (29%), Positives = 17/31 (54%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32
            S +IG +A  A    L+ ++ N++N +T 
Sbjct: 4  MKSLDIGASALSAERTHLNVISMNLANANTT 34



 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 6/44 (13%), Positives = 21/44 (47%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           + G+++  + N + EM  M+   + + +  + +   +    +A+
Sbjct: 98  QEGYVKTPDINVVEEMANMLTAMRTYEANVSAVTNTKNMFNKAL 141


>gi|28869137|ref|NP_791756.1| flagellar basal-body rod protein FlgB [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|213967585|ref|ZP_03395733.1| flagellar basal-body rod protein FlgB [Pseudomonas syringae pv.
           tomato T1]
 gi|237799203|ref|ZP_04587664.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|237806222|ref|ZP_04592926.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|301385710|ref|ZP_07234128.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
           tomato Max13]
 gi|302060078|ref|ZP_07251619.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
           tomato K40]
 gi|302134837|ref|ZP_07260827.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
           tomato NCPPB 1108]
 gi|28852377|gb|AAO55451.1| flagellar basal-body rod protein FlgB [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|213927886|gb|EEB61433.1| flagellar basal-body rod protein FlgB [Pseudomonas syringae pv.
           tomato T1]
 gi|331017029|gb|EGH97085.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
 gi|331022058|gb|EGI02115.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331027335|gb|EGI07390.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 135

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 38/113 (33%), Gaps = 3/113 (2%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
             +  I   A     QR   +A+N+SN DT  F+   ++FS V+ A +ND  Q   F  +
Sbjct: 6   DKALGIHEKALNFRAQRAEVLANNISNADTPNFKARDLEFSSVLAA-ENDKAQNGHFALN 64

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSL 114
                  E     +    L +           +    + T    +     G  
Sbjct: 65  KTNSRHIEAEGMGNDDGTLMYRTPSQPSLDQNTVDSQVET--ASYTENAMGFQ 115


>gi|238785491|ref|ZP_04629474.1| hypothetical protein yberc0001_18240 [Yersinia bercovieri ATCC
          43970]
 gi|238713593|gb|EEQ05622.1| hypothetical protein yberc0001_18240 [Yersinia bercovieri ATCC
          43970]
          Length = 549

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 20/39 (51%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
           N  ++   A +  LSTV++N++N    G+      F++
Sbjct: 1  MNTAMSGLSAAQYALSTVSNNITNFQVAGYNRQNAIFAQ 39


>gi|148546703|ref|YP_001266805.1| flagellar basal body rod protein FlgB [Pseudomonas putida F1]
 gi|148510761|gb|ABQ77621.1| flagellar basal-body rod protein FlgB [Pseudomonas putida F1]
 gi|313497758|gb|ADR59124.1| FlgB [Pseudomonas putida BIRD-1]
          Length = 136

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 26/64 (40%)

Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76
          QR   +A+N++N DT  ++   + FS V+ A  +        +        +  G  I+ 
Sbjct: 21 QRAEVLANNIANADTPNYKARDMDFSSVLAAETSKQQGGRFAMDRTNSRHIEAEGLAIAA 80

Query: 77 GTEL 80
             L
Sbjct: 81 DDTL 84


>gi|91976147|ref|YP_568806.1| flagellar hook-associated protein [Rhodopseudomonas palustris
          BisB5]
 gi|91682603|gb|ABE38905.1| Flagellar hook-associated protein [Rhodopseudomonas palustris
          BisB5]
          Length = 623

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 14/92 (15%), Positives = 34/92 (36%), Gaps = 3/92 (3%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
          + +I +A   A +  +S V+ N++N +T G+    V   + +          +S +   +
Sbjct: 6  ALSIAMAGLRANQASMSLVSSNVANAETPGYVRKTV---DQITTTAGPSGSGVSIIGVNR 62

Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESP 95
          E  +       +  +   +AL    +      
Sbjct: 63 ELDAYLQSQLRTETSGASYALLRSDFLKQLQG 94



 Score = 41.0 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 10/73 (13%), Positives = 28/73 (38%)

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
           Q FV ++ S           + +   T+++ +   S  N   EM  ++ L   +++   +
Sbjct: 549 QQFVGQQGSDALAASQLAEGQSVVLNTLQQKYSTSSGVNMDEEMAHLLSLQNAYSANARV 608

Query: 227 IDENEKSMLEAIR 239
           +    +     ++
Sbjct: 609 MSTVNQMYQALMQ 621


>gi|254993619|ref|ZP_05275809.1| flagellar basal body rod protein FlgC [Listeria monocytogenes FSL
           J2-064]
          Length = 136

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 21/40 (52%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           G++  +N +   EM  ++   + + + T+ +  NEK M +
Sbjct: 90  GYVNYANVDMTAEMTNLMVXQKMYAANTSALQANEKMMEK 129



 Score = 38.7 bits (88), Expect = 0.67,   Method: Composition-based stats.
 Identities = 8/30 (26%), Positives = 15/30 (50%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTD 30
          M    N   +A  A +Q +   ++N++N D
Sbjct: 1  MFEGINTSGSALNAAKQWMEVSSNNIANAD 30


>gi|170741834|ref|YP_001770489.1| flagellar basal body rod protein FlgC [Methylobacterium sp. 4-46]
 gi|168196108|gb|ACA18055.1| flagellar basal-body rod protein FlgC [Methylobacterium sp. 4-46]
          Length = 138

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 16/42 (38%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
            N N + EM  M    + + +   +I +    +   I  + S
Sbjct: 97  PNVNVLIEMTDMREANRSYEANLQMIKQARALVASVIDLLKS 138



 Score = 39.5 bits (90), Expect = 0.39,   Method: Composition-based stats.
 Identities = 10/100 (10%), Positives = 24/100 (24%), Gaps = 8/100 (8%)

Query: 8   GLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQKISFVA 60
             A       RL  VA+N++N  + G       ++   + F   +          +  + 
Sbjct: 12  ASAGMEVQSLRLRVVAENIANAQSTGVDPGSDPYQRKTITFRSELDRAAGAATVGVREIG 71

Query: 61  -SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
                +  +      +     D            +     
Sbjct: 72  VDRAPFRVEHEPGNPAADENGDVKYPNVNVLIEMTDMREA 111


>gi|92114101|ref|YP_574029.1| flagellar basal-body rod protein FlgB [Chromohalobacter
          salexigens DSM 3043]
 gi|91797191|gb|ABE59330.1| flagellar basal-body rod protein FlgB [Chromohalobacter
          salexigens DSM 3043]
          Length = 139

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 10/65 (15%), Positives = 20/65 (30%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTG 77
          R   +A+N++N DT  ++     FS  +         +   ++                G
Sbjct: 22 RQKVLANNIANADTPNYKARDFDFSAELDRAMQSGGGREGGLSLATTSARHIPAQAPGGG 81

Query: 78 TELDF 82
             D 
Sbjct: 82 GVHDL 86


>gi|330860609|emb|CBX70906.1| flagellar basal-body rod protein flgB [Yersinia enterocolitica
          W22703]
          Length = 96

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 23/64 (35%), Gaps = 2/64 (3%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
            A   R   ++ N++N DT GF+   + FS  +  +        + V+           
Sbjct: 1  MRAQ--RQEILSSNIANADTPGFQARDIDFSSQLKKVMEQGRASGTGVSLSLTSARHIPA 58

Query: 72 SFIS 75
          S + 
Sbjct: 59 STVQ 62


>gi|317052364|ref|YP_004113480.1| flagellar basal-body rod protein FlgB [Desulfurispirillum indicum
          S5]
 gi|316947448|gb|ADU66924.1| flagellar basal-body rod protein FlgB [Desulfurispirillum indicum
          S5]
          Length = 141

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 6/72 (8%), Positives = 22/72 (30%)

Query: 9  LAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSK 68
            +     +    +A N++N +T  ++  ++ F + +        +    +   + + S 
Sbjct: 16 ATSMTVRSKNQDVIATNVANAETPNYKAKELVFEDQLREAVLGRKEDKEMIPMARTHESH 75

Query: 69 EVGSFISTGTEL 80
                      
Sbjct: 76 LPTGAKPAFMPY 87


>gi|300024587|ref|YP_003757198.1| flagellar hook-associated protein FlgK [Hyphomicrobium
           denitrificans ATCC 51888]
 gi|299526408|gb|ADJ24877.1| flagellar hook-associated protein FlgK [Hyphomicrobium
           denitrificans ATCC 51888]
          Length = 487

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 19/38 (50%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
            N   EM  ++ L + F + + LI+   + +   I+++
Sbjct: 449 VNLDEEMTNLLDLERTFQASSRLINTVNEMLSTLIQSL 486


>gi|187478191|ref|YP_786215.1| flagellar hook-associated protein FlgK [Bordetella avium 197N]
 gi|115422777|emb|CAJ49305.1| flagellar hook-associated protein 1 [Bordetella avium 197N]
          Length = 550

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 24/181 (13%), Positives = 45/181 (24%), Gaps = 3/181 (1%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
              +N+ L    A +  LS  + N++N  T G+   +V  S    +  +           
Sbjct: 1   MNLYNLALTGLNASQAGLSVTSHNINNAATDGYSRQRVVTSTAGASATSQGYFGRGVQVD 60

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
             +            G     A        + +   +   R         G   S +   
Sbjct: 61  TVKRQFDGFLYKQLVGASGSAAQLSTQLDQMTAVNNLFADRTVGVSAALSGMFSSLNSAA 120

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV---IATMGLYSVDMSQGFVRRENSGIS 178
                 +V   +  K         G   Q       + T    +V     ++ R N    
Sbjct: 121 SAPADPAVRQDLTGKTNSLVAQINGAYQQLQNQRDGLNTQISTTVTQVNSYLERINDLNQ 180

Query: 179 P 179
            
Sbjct: 181 Q 181


>gi|238788312|ref|ZP_04632106.1| Flagellar basal-body rod protein flgB [Yersinia frederiksenii
          ATCC 33641]
 gi|238723558|gb|EEQ15204.1| Flagellar basal-body rod protein flgB [Yersinia frederiksenii
          ATCC 33641]
          Length = 137

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 24/65 (36%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   ++ N++N DT GF+   + FS  +  +        + V+          
Sbjct: 15 ALNLRAQRQEILSSNIANADTPGFQARDIDFSSQLKKVMEQGRVNGTGVSLSLTSARHIP 74

Query: 71 GSFIS 75
           S + 
Sbjct: 75 ASTVQ 79


>gi|254496884|ref|ZP_05109732.1| flagellar basal body rod protein FlgB [Legionella drancourtii
          LLAP12]
 gi|254353903|gb|EET12590.1| flagellar basal body rod protein FlgB [Legionella drancourtii
          LLAP12]
          Length = 130

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 16/87 (18%), Positives = 40/87 (45%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           + F I   A +  +QR S +A+N++N +T  ++   V F++++ A      Q++   + 
Sbjct: 6  DSYFGIHAKALIGRDQRSSQLANNIANANTPRYKAQDVDFNDLLAAQMAGSSQQLETTSP 65

Query: 62 GKEYLSKEVGSFISTGTELDFALEGDA 88
               + +  + +        +L+G+ 
Sbjct: 66 NHISSTGDFNANLKYRVTAQMSLDGNT 92


>gi|123442778|ref|YP_001006755.1| flagellar hook-associated protein FlgK [Yersinia enterocolitica
          subsp. enterocolitica 8081]
 gi|122089739|emb|CAL12592.1| flagellar hook-associated protein 1 [Yersinia enterocolitica
          subsp. enterocolitica 8081]
          Length = 554

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 1  MQTSF-NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
          M  S  N  ++   A +  LSTV++N++N    G+      F++
Sbjct: 1  MSNSLMNTAMSGLSAAQYALSTVSNNITNFQVAGYNRQNTIFAQ 44


>gi|58582193|ref|YP_201209.1| flagellar basal body rod protein FlgC [Xanthomonas oryzae pv.
           oryzae KACC10331]
 gi|58426787|gb|AAW75824.1| flagellar biosynthesis cell-proximal portion of basal-body rod
           [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 127

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 5/43 (11%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   + + + +M  MI  ++ + +   +++  ++  L  + 
Sbjct: 82  GYVFSPDVDPVSQMVNMISASRNYQAGVEMLNTAKELALATLT 124


>gi|146281768|ref|YP_001171921.1| flagellar basal body rod protein FlgB [Pseudomonas stutzeri
          A1501]
 gi|145569973|gb|ABP79079.1| flagellar basal-body rod protein FlgB [Pseudomonas stutzeri
          A1501]
          Length = 134

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 17/38 (44%)

Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
           QR   +A+N++N DT  ++   + F  V+        
Sbjct: 20 SQRAEVLANNIANADTPNYKARDLDFGSVLAEQSAQGQ 57


>gi|291539399|emb|CBL12510.1| flagellar hook-associated protein FlgK [Roseburia intestinalis
          XB6B4]
          Length = 613

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 17/37 (45%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
             I  +   A +  L+T A+N+SN  T G+   +  
Sbjct: 7  GLTIASSGLSAYQVALNTSANNISNVQTKGYSKQQAN 43


>gi|289679032|ref|ZP_06499922.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
          syringae FF5]
 gi|302185586|ref|ZP_07262259.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
          syringae 642]
 gi|330899398|gb|EGH30817.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
          japonica str. M301072PT]
 gi|330943204|gb|EGH45611.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
          pisi str. 1704B]
 gi|330975973|gb|EGH76039.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
          aptata str. DSM 50252]
          Length = 135

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 30/80 (37%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
            +  I   A     QR   +A+N+SN DT  F+   ++FS V+ A  +        +  
Sbjct: 6  DKALGIHEKALNFRAQRAEVLANNISNADTPNFKARDLEFSSVLAAETDKAQNGHFALNK 65

Query: 62 GKEYLSKEVGSFISTGTELD 81
                +  G     GT + 
Sbjct: 66 TNSRHIEAEGMGNDDGTLMY 85


>gi|253996313|ref|YP_003048377.1| flagellar hook-associated protein FlgK [Methylotenera mobilis JLW8]
 gi|253982992|gb|ACT47850.1| flagellar hook-associated protein FlgK [Methylotenera mobilis JLW8]
          Length = 657

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 21/191 (10%), Positives = 41/191 (21%), Gaps = 1/191 (0%)

Query: 3   TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
              NIG +A  A +  +ST   N++N  T G+    V  +                    
Sbjct: 4   NILNIGKSALAAAQVGISTTGHNIANASTPGYSRQVVVQAAAQSQNF-GYGFVGQGTEIA 62

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
                               +   + + +  +    +L+               A  K  
Sbjct: 63  SVTRIFNDILAAQAVRSQSNSSSANTYLSQMTSINDMLSNSTAGLNPAMSDFFGAVQKLS 122

Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182
                    Q                + +   I       +  S G V      I+    
Sbjct: 123 ANPSDIPTRQSMLSYAQSLASRFQTTNNRLNEIRDSVNTQLTSSVGLVNTYAKQIASLND 182

Query: 183 PTPLEDLSGVT 193
                  +  +
Sbjct: 183 VIEKSISANGS 193



 Score = 39.1 bits (89), Expect = 0.61,   Method: Composition-based stats.
 Identities = 24/221 (10%), Positives = 56/221 (25%), Gaps = 12/221 (5%)

Query: 23  ADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDF 82
           + N++NT T          + +     +         +      +    + ++     + 
Sbjct: 449 SANVANTGT----------ASISSPAADSTYASSPIASPFNITYNAGAPNTLTGFIATEP 498

Query: 83  ALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNV 142
                   ++    G  +T      ++  G   + SG     D  +V             
Sbjct: 499 VTVTSNGTSVTYAAGAPVTFVNGATISTAGMSFTISGTPNNGDQFTVTPNSVTGPGDNTN 558

Query: 143 GEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDS 202
           G      Q    I     YS    Q  V    +        +  E      +      +S
Sbjct: 559 GLLLAKLQNADTITGNKSYSDAFGQ-MVNGVGNKTRELGILSVSEGQVLEQINASVQAES 617

Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
             N   E   +I   Q + +   ++    +     +  + +
Sbjct: 618 GVNLDEEATNLIRYQQAYQAAGKMMQIASQLFDVLL-QLGT 657


>gi|15594639|ref|NP_212428.1| flagellar basal body rod protein FlgB [Borrelia burgdorferi B31]
 gi|223888689|ref|ZP_03623280.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi 64b]
 gi|1706829|sp|P52608|FLGB_BORBU RecName: Full=Flagellar basal-body rod protein flgB
 gi|1165278|gb|AAA85617.1| FlgB [Borrelia burgdorferi]
 gi|2688172|gb|AAC66654.1| flagellar basal-body rod protein (flgB) [Borrelia burgdorferi
          B31]
 gi|223885505|gb|EEF56604.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi 64b]
          Length = 135

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 11/32 (34%), Positives = 17/32 (53%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
             L  R S ++DN++N DT  F+  K+ F  
Sbjct: 15 LDVLSLRQSVISDNIANIDTPNFKRSKISFES 46


>gi|332294890|ref|YP_004436813.1| flagellar basal-body rod protein FlgB [Thermodesulfobium
          narugense DSM 14796]
 gi|332177993|gb|AEE13682.1| flagellar basal-body rod protein FlgB [Thermodesulfobium
          narugense DSM 14796]
          Length = 134

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 10/65 (15%), Positives = 23/65 (35%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
                +R   +A N++N DT G+++  + F   +     +    I    +   ++S   
Sbjct: 14 GLSGAYKRNEVLAQNIANADTPGYKSYDINFMSELKKALEEDQDNIPLKRTNPLHMSDTP 73

Query: 71 GSFIS 75
               
Sbjct: 74 NLNKD 78


>gi|323492340|ref|ZP_08097493.1| flagellar basal body rod protein FlgC [Vibrio brasiliensis LMG
           20546]
 gi|323313387|gb|EGA66498.1| flagellar basal body rod protein FlgC [Vibrio brasiliensis LMG
           20546]
          Length = 144

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 6/42 (14%), Positives = 18/42 (42%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   + + + EM  M+  T+ F +   ++   +      +
Sbjct: 97  GYVYYPDVDVVSEMADMMSATRSFETNVEVLTNVKSMQQGLL 138



 Score = 38.3 bits (87), Expect = 0.92,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 6/49 (12%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIK 49
          I  +A  A   RL+TVA N++N D V       ++ +K  F+ V    +
Sbjct: 9  IAGSAMNAQTVRLNTVASNLANADAVSANPDDAYKALKPVFATVYNKTQ 57


>gi|209545549|ref|YP_002277778.1| flagellar basal body rod protein FlgC [Gluconacetobacter
          diazotrophicus PAl 5]
 gi|209533226|gb|ACI53163.1| flagellar basal-body rod protein FlgC [Gluconacetobacter
          diazotrophicus PAl 5]
          Length = 135

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 25/77 (32%), Gaps = 7/77 (9%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQKISFV 59
          +  A   A E+RL   A+N++N DT G       +R   + F   +         K+  +
Sbjct: 9  VSAAGMRAQEERLRVAAENLANKDTTGSTRGADPYRRKTITFQATLDQASGVSSVKVKGI 68

Query: 60 ASGKEYLSKEVGSFIST 76
                   +       
Sbjct: 69 GQDNTPFQTKYDPSHPA 85



 Score = 37.9 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 8/45 (17%), Positives = 16/45 (35%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           G+++  N NSM E+         + +    +  +       I  I
Sbjct: 90  GYVKMPNVNSMVEIMDTHEAQHSYEANLNTMQISRSMATRTINLI 134


>gi|238785500|ref|ZP_04629483.1| Flagellar basal-body rod protein flgB [Yersinia bercovieri ATCC
          43970]
 gi|238713602|gb|EEQ05631.1| Flagellar basal-body rod protein flgB [Yersinia bercovieri ATCC
          43970]
          Length = 137

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 24/65 (36%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   ++ N++N DT GF+   + FS  +  +        + V+          
Sbjct: 15 ALNLRAQRQEILSSNIANADTPGFQARDIDFSSQLKKVVEQGRVSGTGVSLSLTSARHIP 74

Query: 71 GSFIS 75
           S + 
Sbjct: 75 ASTVQ 79


>gi|255099412|ref|ZP_05328389.1| flagellar basal-body rod protein [Clostridium difficile
          QCD-63q42]
          Length = 105

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 19/35 (54%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV 45
             A   R  T+A+N++N +T G++   V F E +
Sbjct: 10 GLDATNLRSQTIANNIANINTEGYKRHYVTFEETL 44


>gi|149184204|ref|ZP_01862522.1| flagellar proximal rod protein [Erythrobacter sp. SD-21]
 gi|148831524|gb|EDL49957.1| flagellar proximal rod protein [Erythrobacter sp. SD-21]
          Length = 115

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 28/77 (36%), Gaps = 1/77 (1%)

Query: 1  MQTSFN-IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFV 59
          M      I  AA     QRL  +  N++N  T G++   + F+  + A     +   +  
Sbjct: 1  MSEGLFGIHGAALEIRSQRLGVLGSNIANAATPGYKARDIDFAAALDARLEGAEASGATT 60

Query: 60 ASGKEYLSKEVGSFIST 76
           + K  +        +T
Sbjct: 61 GAIKYRVPTMASLDGNT 77


>gi|303248233|ref|ZP_07334496.1| flagellar hook-associated protein FlgK [Desulfovibrio
          fructosovorans JJ]
 gi|302490371|gb|EFL50282.1| flagellar hook-associated protein FlgK [Desulfovibrio
          fructosovorans JJ]
          Length = 696

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 11/73 (15%), Positives = 20/73 (27%)

Query: 8  GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLS 67
          G +   A +  L    +N++N DT G+    V   +      +        VA       
Sbjct: 11 GRSGLTASQAALQVTGNNIANVDTEGYSKQSVVLVDGNYITSSPGQLGSGVVAQEVVRSY 70

Query: 68 KEVGSFISTGTEL 80
            +          
Sbjct: 71 DALTQSQYLSQIS 83



 Score = 40.6 bits (93), Expect = 0.20,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 12/37 (32%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  +   E+  +I     + +   LI   +      +
Sbjct: 656 SGVSLDEELTNLIKFQHAYQAAAKLISTADSLFQTVL 692


>gi|241204820|ref|YP_002975916.1| hypothetical protein Rleg_2100 [Rhizobium leguminosarum bv.
          trifolii WSM1325]
 gi|240858710|gb|ACS56377.1| protein of unknown function DUF1078 domain protein [Rhizobium
          leguminosarum bv. trifolii WSM1325]
          Length = 101

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 20/40 (50%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46
            L+   A   R+S +A+N++NT T  +  +    + VV 
Sbjct: 9  TALSGMRAQATRVSAIANNIANTSTPDYARLNTSLTSVVS 48


>gi|332161328|ref|YP_004297905.1| flagellar hook-associated protein FlgK [Yersinia enterocolitica
          subsp. palearctica 105.5R(r)]
 gi|318605248|emb|CBY26746.1| flagellar hook-associated protein FlgK [Yersinia enterocolitica
          subsp. palearctica Y11]
 gi|325665558|gb|ADZ42202.1| flagellar hook-associated protein FlgK [Yersinia enterocolitica
          subsp. palearctica 105.5R(r)]
 gi|330861098|emb|CBX71365.1| flagellar hook-associated protein 1 [Yersinia enterocolitica
          W22703]
          Length = 554

 Score = 44.5 bits (103), Expect = 0.015,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 1  MQTSF-NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
          M  S  N  ++   A +  LSTV++N++N    G+      F++
Sbjct: 1  MSNSLMNTAMSGLSAAQYALSTVSNNITNFQVAGYNRQNTIFAQ 44


>gi|315186992|gb|EFU20749.1| flagellar hook-associated protein FlgK [Spirochaeta thermophila DSM
           6578]
          Length = 624

 Score = 44.5 bits (103), Expect = 0.015,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 14/41 (34%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E+ QMI     + +    I      +   I  +A
Sbjct: 583 SGVNIDEELAQMIKFQHGYAASARFISTFNSMLDLLINRMA 623



 Score = 42.5 bits (98), Expect = 0.045,   Method: Composition-based stats.
 Identities = 16/41 (39%), Positives = 20/41 (48%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44
          S  IG    LA  Q L+TV  NMSN    G+   +V F  +
Sbjct: 7  SIEIGKRGLLAHTQGLATVGHNMSNASVEGYSRQRVNFEAM 47


>gi|291562032|emb|CBL40848.1| flagellar basal-body rod protein FlgC [butyrate-producing bacterium
           SS3/4]
          Length = 149

 Score = 44.5 bits (103), Expect = 0.015,   Method: Composition-based stats.
 Identities = 6/42 (14%), Positives = 19/42 (45%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N + + E    +  T+ + +  T ++  +    +A+
Sbjct: 104 GYVTMPNVDVLKETVDSMSATRSYEANVTALNAIKLMAQKAL 145



 Score = 43.7 bits (101), Expect = 0.024,   Method: Composition-based stats.
 Identities = 10/29 (34%), Positives = 16/29 (55%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTV 32
          SF+I  +   A   R+   A+N++N DT 
Sbjct: 6  SFDISASGMSAQRVRMDIAAENIANMDTT 34


>gi|190891944|ref|YP_001978486.1| flagellar basal body rod protein [Rhizobium etli CIAT 652]
 gi|190697223|gb|ACE91308.1| probable flagellar basal body rod protein [Rhizobium etli CIAT
          652]
          Length = 100

 Score = 44.5 bits (103), Expect = 0.015,   Method: Composition-based stats.
 Identities = 10/29 (34%), Positives = 18/29 (62%)

Query: 6  NIGLAAQLALEQRLSTVADNMSNTDTVGF 34
          NI L+   A   R+  +A+N++N+ T G+
Sbjct: 8  NIALSGMRAQATRIGAIANNVANSSTSGY 36



 Score = 37.5 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 5/33 (15%), Positives = 13/33 (39%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
            S+ +   E+ +MI   Q + +   + +     
Sbjct: 58  TSDVDPATELTEMIEAEQAYKANAAVFETGADM 90


>gi|238793995|ref|ZP_04637613.1| Flagellar basal-body rod protein flgB [Yersinia intermedia ATCC
          29909]
 gi|238726627|gb|EEQ18163.1| Flagellar basal-body rod protein flgB [Yersinia intermedia ATCC
          29909]
          Length = 137

 Score = 44.5 bits (103), Expect = 0.015,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 24/65 (36%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   ++ N++N DT GF+   + FS  +  +        + V+          
Sbjct: 15 ALNLRAQRQEILSSNIANADTPGFQARDIDFSSQLKKVMEQGRANGTGVSLSLTSARHIP 74

Query: 71 GSFIS 75
           S + 
Sbjct: 75 ASTVQ 79


>gi|258404782|ref|YP_003197524.1| flagellar basal-body rod protein FlgC [Desulfohalobium retbaense
           DSM 5692]
 gi|257797009|gb|ACV67946.1| flagellar basal-body rod protein FlgC [Desulfohalobium retbaense
           DSM 5692]
          Length = 142

 Score = 44.5 bits (103), Expect = 0.015,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 23/42 (54%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   + N + EM  ++  T+ + +  T I  +++  ++A+
Sbjct: 97  GYVTMPDINVLEEMTDIMAATRAYEANVTSIKASQRMAVKAL 138



 Score = 37.5 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 8/29 (27%), Positives = 17/29 (58%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTV 32
          + +I  +A  A   R++  + N++NT+T 
Sbjct: 6  AMDISASAMTAQSLRMNAASSNLANTETT 34


>gi|22126393|ref|NP_669816.1| flagellar basal body rod protein FlgB [Yersinia pestis KIM 10]
 gi|45441412|ref|NP_992951.1| flagellar basal body rod protein FlgB [Yersinia pestis biovar
          Microtus str. 91001]
 gi|51596008|ref|YP_070199.1| flagellar basal body rod protein FlgB [Yersinia
          pseudotuberculosis IP 32953]
 gi|108807170|ref|YP_651086.1| flagellar basal body rod protein FlgB [Yersinia pestis Antiqua]
 gi|108812486|ref|YP_648253.1| flagellar basal body rod protein FlgB [Yersinia pestis Nepal516]
 gi|145598613|ref|YP_001162689.1| flagellar basal body rod protein FlgB [Yersinia pestis Pestoides
          F]
 gi|149366254|ref|ZP_01888289.1| flagellar basal-body rod protein FlgB [Yersinia pestis CA88-4125]
 gi|153947522|ref|YP_001401293.1| flagellar basal body rod protein FlgB [Yersinia
          pseudotuberculosis IP 31758]
 gi|162419951|ref|YP_001606470.1| flagellar basal body rod protein FlgB [Yersinia pestis Angola]
 gi|165925964|ref|ZP_02221796.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
          Orientalis str. F1991016]
 gi|165938769|ref|ZP_02227324.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
          Orientalis str. IP275]
 gi|166010954|ref|ZP_02231852.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
          Antiqua str. E1979001]
 gi|166211185|ref|ZP_02237220.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
          Antiqua str. B42003004]
 gi|167401128|ref|ZP_02306631.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
          Antiqua str. UG05-0454]
 gi|167420101|ref|ZP_02311854.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
          Orientalis str. MG05-1020]
 gi|167425829|ref|ZP_02317582.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
          Mediaevalis str. K1973002]
 gi|167469717|ref|ZP_02334421.1| flagellar basal-body rod protein FlgB [Yersinia pestis FV-1]
 gi|170024650|ref|YP_001721155.1| flagellar basal body rod protein FlgB [Yersinia
          pseudotuberculosis YPIII]
 gi|186895111|ref|YP_001872223.1| flagellar basal body rod protein FlgB [Yersinia
          pseudotuberculosis PB1/+]
 gi|218928919|ref|YP_002346794.1| flagellar basal body rod protein FlgB [Yersinia pestis CO92]
 gi|229896239|ref|ZP_04511409.1| flagellar basal-body rod protein FlgB [Yersinia pestis Pestoides
          A]
 gi|229897174|ref|ZP_04512330.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
          Orientalis str. PEXU2]
 gi|229897900|ref|ZP_04513051.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
          Orientalis str. India 195]
 gi|229902868|ref|ZP_04517985.1| flagellar basal-body rod protein FlgB [Yersinia pestis Nepal516]
 gi|270486648|ref|ZP_06203722.1| flagellar basal-body rod protein FlgB [Yersinia pestis KIM D27]
 gi|294504033|ref|YP_003568095.1| flagellar basal body rod protein [Yersinia pestis Z176003]
 gi|21959380|gb|AAM86067.1|AE013854_3 cell-proximal portion of basal-body rod protein [Yersinia pestis
          KIM 10]
 gi|45436273|gb|AAS61828.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
          Microtus str. 91001]
 gi|51589290|emb|CAH20911.1| flagellar basal-body rod protein FlgB [Yersinia
          pseudotuberculosis IP 32953]
 gi|108776134|gb|ABG18653.1| flagellar basal-body rod protein FlgB [Yersinia pestis Nepal516]
 gi|108779083|gb|ABG13141.1| flagellar basal-body rod protein FlgB [Yersinia pestis Antiqua]
 gi|115347530|emb|CAL20439.1| flagellar basal-body rod protein FlgB [Yersinia pestis CO92]
 gi|145210309|gb|ABP39716.1| flagellar basal-body rod protein FlgB [Yersinia pestis Pestoides
          F]
 gi|149292667|gb|EDM42741.1| flagellar basal-body rod protein FlgB [Yersinia pestis CA88-4125]
 gi|152959017|gb|ABS46478.1| flagellar basal-body rod protein FlgB [Yersinia
          pseudotuberculosis IP 31758]
 gi|162352766|gb|ABX86714.1| flagellar basal-body rod protein FlgB [Yersinia pestis Angola]
 gi|165913383|gb|EDR32005.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
          Orientalis str. IP275]
 gi|165922168|gb|EDR39345.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
          Orientalis str. F1991016]
 gi|165990298|gb|EDR42599.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
          Antiqua str. E1979001]
 gi|166208365|gb|EDR52845.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
          Antiqua str. B42003004]
 gi|166961796|gb|EDR57817.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
          Orientalis str. MG05-1020]
 gi|167049517|gb|EDR60925.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
          Antiqua str. UG05-0454]
 gi|167055228|gb|EDR65025.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
          Mediaevalis str. K1973002]
 gi|169751184|gb|ACA68702.1| flagellar basal-body rod protein FlgB [Yersinia
          pseudotuberculosis YPIII]
 gi|186698137|gb|ACC88766.1| flagellar basal-body rod protein FlgB [Yersinia
          pseudotuberculosis PB1/+]
 gi|229680315|gb|EEO76414.1| flagellar basal-body rod protein FlgB [Yersinia pestis Nepal516]
 gi|229688941|gb|EEO81006.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
          Orientalis str. India 195]
 gi|229693511|gb|EEO83560.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
          Orientalis str. PEXU2]
 gi|229701162|gb|EEO89191.1| flagellar basal-body rod protein FlgB [Yersinia pestis Pestoides
          A]
 gi|262361781|gb|ACY58502.1| flagellar basal body rod protein [Yersinia pestis D106004]
 gi|262366083|gb|ACY62640.1| flagellar basal body rod protein [Yersinia pestis D182038]
 gi|270335152|gb|EFA45929.1| flagellar basal-body rod protein FlgB [Yersinia pestis KIM D27]
 gi|294354492|gb|ADE64833.1| flagellar basal body rod protein [Yersinia pestis Z176003]
 gi|320015470|gb|ADV99041.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar
          Medievalis str. Harbin 35]
          Length = 137

 Score = 44.5 bits (103), Expect = 0.015,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 24/65 (36%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   ++ N++N DT GF+   + FS  +  +        + V+          
Sbjct: 15 ALNLRAQRQEILSSNIANADTPGFQARDIDFSSQLKKVMEQGRANGTGVSLSLTSARHIP 74

Query: 71 GSFIS 75
           + + 
Sbjct: 75 ATTVQ 79


>gi|203287640|ref|YP_002222655.1| flagellar hook-associated protein [Borrelia recurrentis A1]
 gi|201084860|gb|ACH94434.1| flagellar hook-associated protein [Borrelia recurrentis A1]
          Length = 627

 Score = 44.5 bits (103), Expect = 0.015,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 17/41 (41%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E+  MI   Q F + +  I+ + + +   I  + 
Sbjct: 586 SGVNKDEELANMIEFQQSFIAASKFINISAELIDTIINKMG 626


>gi|109899404|ref|YP_662659.1| flagellar basal-body rod protein FlgC [Pseudoalteromonas atlantica
           T6c]
 gi|109701685|gb|ABG41605.1| flagellar basal-body rod protein FlgC [Pseudoalteromonas atlantica
           T6c]
          Length = 140

 Score = 44.5 bits (103), Expect = 0.015,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 20/43 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N + EM  M+  ++ + +   + D  ++     +R
Sbjct: 93  GYIYKPNVNIVEEMADMMSASKAYETNVQVADTTKRLFRNVLR 135



 Score = 39.5 bits (90), Expect = 0.39,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 27/84 (32%), Gaps = 6/84 (7%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56
             +I      A   RL+T A N++N ++V       ++     F+  +     D +   
Sbjct: 5  NVMDIASTGMSAQSVRLNTTASNVANANSVSSSYDQTYKARHPVFAAELQRASQDQNAGT 64

Query: 57 SFVASGKEYLSKEVGSFISTGTEL 80
               G       +    S G  +
Sbjct: 65 GVQVMGIVESDAPLQIEYSPGHPM 88


>gi|170737036|ref|YP_001778296.1| flagellar basal-body rod protein FlgC [Burkholderia cenocepacia
           MC0-3]
 gi|169819224|gb|ACA93806.1| flagellar basal-body rod protein FlgC [Burkholderia cenocepacia
           MC0-3]
          Length = 132

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 22/43 (51%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G +  SN +++ EM  M+  ++ F++   ++   +    + +R
Sbjct: 86  GMVFYSNVSAVEEMADMMAASRAFSTNVEVLTRIKGMQQDLLR 128



 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 28/79 (35%), Gaps = 5/79 (6%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTVG-----FRTIKVKFSEVVGAIKNDIDQKISFVAS 61
          I  +A  A   RL+T+A N++N  T G     +R  K  F+ V       +         
Sbjct: 9  IAGSALSAQTVRLNTIASNLANAGTSGTEETAYRARKPVFASVFQNGGARVQVLDVIATD 68

Query: 62 GKEYLSKEVGSFISTGTEL 80
                 E G  ++    +
Sbjct: 69 DALAARHEPGHPLADENGM 87


>gi|295110886|emb|CBL27636.1| Flagellar hook-associated protein [Synergistetes bacterium SGP1]
          Length = 442

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 17/41 (41%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E+  MI L + F +++  +   ++ +   I    
Sbjct: 398 SGVNLDEELMDMITLNRCFGAMSRYVTTVDEMLNAIINGFG 438


>gi|291613035|ref|YP_003523192.1| flagellar basal-body rod protein FlgB [Sideroxydans
          lithotrophicus ES-1]
 gi|291583147|gb|ADE10805.1| flagellar basal-body rod protein FlgB [Sideroxydans
          lithotrophicus ES-1]
          Length = 134

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 9/56 (16%), Positives = 22/56 (39%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65
           A      R   +A N++N DT  ++   + F+  +    +   +K+    +   +
Sbjct: 14 TALNLRAARQELIASNIANADTPNYKAKDIDFASALQGALSGSGEKLQVAVTSPLH 69


>gi|261856363|ref|YP_003263646.1| flagellar basal-body rod protein FlgB [Halothiobacillus
          neapolitanus c2]
 gi|261836832|gb|ACX96599.1| flagellar basal-body rod protein FlgB [Halothiobacillus
          neapolitanus c2]
          Length = 132

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 22/54 (40%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
          A +   QR+  +A N++N DT  F+   + F + + A             +  +
Sbjct: 12 ALVFQSQRMGILASNIANADTPNFKARDLSFHDALQAAAGQGSAGQPLALAHNQ 65


>gi|158422260|ref|YP_001523552.1| flagellar basal body rod protein FlgC [Azorhizobium caulinodans ORS
           571]
 gi|158329149|dbj|BAF86634.1| flagellar basal-body rod protein [Azorhizobium caulinodans ORS 571]
          Length = 140

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 13/99 (13%), Positives = 33/99 (33%)

Query: 145 KGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNA 204
            G      K I         +    V+ ++ G+      T  +  +    + G ++  N 
Sbjct: 40  PGADPYTRKTIQFQAELDRTLGASNVKVKSLGVDQAPFLTEYDPGNPAADESGMVKLPNV 99

Query: 205 NSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           N + EM  M    + + +   +I +    +   +  + +
Sbjct: 100 NMLTEMADMREANRSYEANLQMIKQTRSMVAMTVDLLRT 138



 Score = 36.0 bits (81), Expect = 5.2,   Method: Composition-based stats.
 Identities = 11/77 (14%), Positives = 25/77 (32%), Gaps = 7/77 (9%)

Query: 7  IGLAAQLALEQRLSTVADNMSNT----DTVG---FRTIKVKFSEVVGAIKNDIDQKISFV 59
          I  +      QR+  V++N++N      T G   +    ++F   +       + K+  +
Sbjct: 11 IAGSGLQVQAQRMRVVSENLANMRSTGSTPGADPYTRKTIQFQAELDRTLGASNVKVKSL 70

Query: 60 ASGKEYLSKEVGSFIST 76
             +     E       
Sbjct: 71 GVDQAPFLTEYDPGNPA 87


>gi|285018212|ref|YP_003375923.1| flagellar basal body protein [Xanthomonas albilineans GPE PC73]
 gi|283473430|emb|CBA15935.1| probable flagellar basal body protein [Xanthomonas albilineans]
          Length = 132

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 23/49 (46%)

Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
          EQR+  +A N+SN DT G++   + F   + A +   +     V   + 
Sbjct: 20 EQRMKLIASNISNVDTPGYKAQDLDFDAAMRAAQGQREGTQLEVTDSRH 68


>gi|239995127|ref|ZP_04715651.1| flagellar basal-body rod protein FlgC [Alteromonas macleodii ATCC
           27126]
          Length = 140

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 20/43 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   N N + EM  M+  ++ + +   + D  ++     ++
Sbjct: 93  GYIYKPNVNIVEEMANMMSASKAYETNVQVADTTKRIFRRVLQ 135



 Score = 35.2 bits (79), Expect = 7.8,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 20/55 (36%), Gaps = 6/55 (10%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKND 51
              I      A   RL+T A N++N ++V       +R     F+  +     D
Sbjct: 5  NVMQISSTGMEAENVRLNTTASNIANANSVSSSYDETYRARHPVFATALQDAMRD 59


>gi|288574709|ref|ZP_06393066.1| flagellar hook-associated protein FlgK [Dethiosulfovibrio
           peptidovorans DSM 11002]
 gi|288570450|gb|EFC92007.1| flagellar hook-associated protein FlgK [Dethiosulfovibrio
           peptidovorans DSM 11002]
          Length = 856

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 18/39 (46%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            N   EM Q++   Q FN+I+  +   ++ +   I  + 
Sbjct: 814 VNIDEEMMQIMQFQQSFNAISRYVTTLDEMLDRVINGMG 852


>gi|224534383|ref|ZP_03674961.1| flagellar basal-body rod protein FlgB [Borrelia spielmanii A14S]
 gi|224514485|gb|EEF84801.1| flagellar basal-body rod protein FlgB [Borrelia spielmanii A14S]
          Length = 135

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 12/32 (37%), Positives = 17/32 (53%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
             L  R S V+DN++N DT  F+  K+ F  
Sbjct: 15 LDVLSLRQSVVSDNIANVDTPNFKRSKISFEA 46


>gi|126738558|ref|ZP_01754263.1| flagellar hook-associated protein K [Roseobacter sp. SK209-2-6]
 gi|126720357|gb|EBA17063.1| flagellar hook-associated protein K [Roseobacter sp. SK209-2-6]
          Length = 484

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 20/41 (48%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
          ++ N  ++   A  +    V++N++N  T G+   ++  S 
Sbjct: 5  SAINSAMSGLTANARSSQVVSENLANALTPGYSAQRLNLST 45



 Score = 41.8 bits (96), Expect = 0.094,   Method: Composition-based stats.
 Identities = 4/36 (11%), Positives = 18/36 (50%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +S  E+  ++ + + + +   +++  ++ M   +R
Sbjct: 448 VDSDAELQNLMIIERAYAANAKMLEAVDEMMQTLLR 483


>gi|152975155|ref|YP_001374672.1| flagellar basal body rod protein FlgB [Bacillus cereus subsp.
          cytotoxis NVH 391-98]
 gi|152023907|gb|ABS21677.1| flagellar basal-body rod protein FlgB [Bacillus cytotoxicus NVH
          391-98]
          Length = 135

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 29/72 (40%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
             L  + +T+++N+SN +T G++   V FSE +        +  S + +          
Sbjct: 12 MNYLVTKRNTISNNISNANTPGYKAQDVTFSEQMQMSNELYKKNASDLKTNSSLYQTNKL 71

Query: 72 SFISTGTELDFA 83
             +   +  +A
Sbjct: 72 HLPTANVKNTYA 83


>gi|295399806|ref|ZP_06809787.1| flagellar basal-body rod protein FlgB [Geobacillus
          thermoglucosidasius C56-YS93]
 gi|312111682|ref|YP_003989998.1| flagellar basal-body rod protein FlgB [Geobacillus sp. Y4.1MC1]
 gi|294978209|gb|EFG53806.1| flagellar basal-body rod protein FlgB [Geobacillus
          thermoglucosidasius C56-YS93]
 gi|311216783|gb|ADP75387.1| flagellar basal-body rod protein FlgB [Geobacillus sp. Y4.1MC1]
          Length = 130

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 10/65 (15%), Positives = 24/65 (36%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
                 R   +A+N++N DT  ++   V+F   +      ++ K +       +     
Sbjct: 14 GLDYAALREKVIANNIANVDTPNYKAKSVQFRTELDRALQPLEAKRTHPKHLPFHHQISN 73

Query: 71 GSFIS 75
            F++
Sbjct: 74 QFFVT 78


>gi|229058378|ref|ZP_04196762.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH603]
 gi|228719887|gb|EEL71477.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH603]
          Length = 137

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 6/33 (18%), Positives = 14/33 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG 33
          M  + N   +      + +   ++N+ N +T G
Sbjct: 1  MFQAINASGSGLTTARKWMEVTSNNIVNANTTG 33



 Score = 43.3 bits (100), Expect = 0.028,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 22/40 (55%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           G++   N +   EM  ++   + + + T++++ N+K + +
Sbjct: 91  GYVRYPNIDVTAEMTNVMVAQKMYEANTSVLNANKKMLDK 130


>gi|213585978|ref|ZP_03367804.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Typhi str. E98-0664]
          Length = 546

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 9/52 (17%), Positives = 23/52 (44%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+TV++N++N +  G+       ++    +    
Sbjct: 1  MSSLINHAMSGLNAAQAALNTVSNNINNYNVAGYTRQTTILAQANSTLGAGG 52


>gi|56551509|ref|YP_162348.1| flagellar basal-body rod protein FlgC [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|260752884|ref|YP_003225777.1| flagellar basal-body rod protein FlgC [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
 gi|4378860|gb|AAD19728.1| flagellar basal-body rod protein [Zymomonas mobilis subsp. mobilis
           ZM4]
 gi|56543083|gb|AAV89237.1| flagellar basal-body rod protein FlgC [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|258552247|gb|ACV75193.1| flagellar basal-body rod protein FlgC [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
          Length = 134

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 5/35 (14%), Positives = 16/35 (45%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            ++  EM +MI   + + +   ++   +   L+ +
Sbjct: 96  VDTAQEMVEMIETARDYQNNVQVMQTAKSLTLDTL 130


>gi|16125206|ref|NP_419770.1| flagellar basal body rod protein FlgC [Caulobacter crescentus CB15]
 gi|221233942|ref|YP_002516378.1| flagellar basal body rod protein FlgC [Caulobacter crescentus
           NA1000]
 gi|13422230|gb|AAK22938.1| flagellar basal-body rod protein FlgC [Caulobacter crescentus CB15]
 gi|220963114|gb|ACL94470.1| flagellar basal-body rod protein flgC [Caulobacter crescentus
           NA1000]
          Length = 139

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 13/126 (10%), Positives = 34/126 (26%), Gaps = 3/126 (2%)

Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172
             V++S          V  +             G+  ++   +              +R 
Sbjct: 12  MAVASSALRAQQGRMRVIAENIANAHSTARTAGGDPYRRQVPVFKPTTVQGGEGVQMLRV 71

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
           +    +      P    +      G+++  N N+M E   M    + + +   +I+    
Sbjct: 72  DPDQSAFKTEYDPGNPAADAK---GYVKLPNVNTMVESLDMKEAQRAYEANLNVIETARS 128

Query: 233 SMLEAI 238
                +
Sbjct: 129 MQSRTL 134



 Score = 39.9 bits (91), Expect = 0.37,   Method: Composition-based stats.
 Identities = 10/102 (9%), Positives = 27/102 (26%), Gaps = 8/102 (7%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQKIS 57
             +  +A  A + R+  +A+N++N  +         +R     F          + Q + 
Sbjct: 12  MAVASSALRAQQGRMRVIAENIANAHSTARTAGGDPYRRQVPVFKPTTVQGGEGV-QMLR 70

Query: 58  FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
                  + ++      +   +    L               
Sbjct: 71  VDPDQSAFKTEYDPGNPAADAKGYVKLPNVNTMVESLDMKEA 112


>gi|117928047|ref|YP_872598.1| hypothetical protein Acel_0839 [Acidothermus cellulolyticus 11B]
 gi|117648510|gb|ABK52612.1| protein of unknown function DUF1078 domain protein [Acidothermus
           cellulolyticus 11B]
          Length = 130

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 12/116 (10%), Positives = 34/116 (29%)

Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183
               +V  +               +     V A   +       G V         +   
Sbjct: 12  GTALTVNRKWMDAIADNVSNANDVVPGDQPVFAPRYVQVQAAPGGGVEVVAIRYGSSAGI 71

Query: 184 TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
              +  +     RG++  ++ +   +M QMI   + + +   ++     +  +A++
Sbjct: 72  ESYDPTNPQADARGYVRHADVDMTSQMTQMIMAQRSYEANLAIMTRATDAYKQALQ 127


>gi|330961193|gb|EGH61453.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
          maculicola str. ES4326]
          Length = 135

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 31/80 (38%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
            +  I   A     QR   +A+N+SN DT  F+   ++FS V+ A  +        +  
Sbjct: 6  DKALGIHEKALNFRAQRAEVLANNISNADTPNFKARDLEFSSVLAAETDKTQNGHFALNK 65

Query: 62 GKEYLSKEVGSFISTGTELD 81
                +  G   + GT + 
Sbjct: 66 TNSRHIEAEGMGNNDGTLMY 85


>gi|313905162|ref|ZP_07838531.1| flagellar hook-associated protein FlgK [Eubacterium
          cellulosolvens 6]
 gi|313470065|gb|EFR65398.1| flagellar hook-associated protein FlgK [Eubacterium
          cellulosolvens 6]
          Length = 668

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 13/86 (15%), Positives = 28/86 (32%), Gaps = 4/86 (4%)

Query: 1  MQTS----FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56
          M  +    F   L++  A  ++L     N++N  T G+   ++K S +            
Sbjct: 1  MIRATFAGFTTALSSLRANSKKLDVTGQNLANMTTEGYTRQEIKTSSLNYENPTSFYLNE 60

Query: 57 SFVASGKEYLSKEVGSFISTGTELDF 82
          + V  G       +        +  +
Sbjct: 61 NDVNVGFGVSIDRMAQLRDQFLDTQY 86


>gi|296186750|ref|ZP_06855152.1| hypothetical protein CLCAR_2214 [Clostridium carboxidivorans P7]
 gi|296048787|gb|EFG88219.1| hypothetical protein CLCAR_2214 [Clostridium carboxidivorans P7]
          Length = 160

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 6/40 (15%), Positives = 15/40 (37%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           S  +   EM  ++     + +   LI   ++ +   I  +
Sbjct: 119 SGVSLDEEMANLVQFQHCYQANAKLISTVDQLLDVVINGL 158


>gi|238762361|ref|ZP_04623332.1| Flagellar basal-body rod protein FlgC [Yersinia kristensenii ATCC
           33638]
 gi|238699346|gb|EEP92092.1| Flagellar basal-body rod protein FlgC [Yersinia kristensenii ATCC
           33638]
          Length = 141

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 24/47 (51%), Gaps = 1/47 (2%)

Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           +G++     N + EM  M+  ++ F +   +++   KSM +++  + 
Sbjct: 94  QGYVFYPAVNVVSEMADMMSASRSFETNVEVLNSV-KSMQQSVLKLG 139


>gi|58039489|ref|YP_191453.1| flagellar hook-associated protein 1 FlgK [Gluconobacter oxydans
          621H]
 gi|58001903|gb|AAW60797.1| Flagellar hook-associated protein 1 FlgK [Gluconobacter oxydans
          621H]
          Length = 509

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 8/51 (15%), Positives = 20/51 (39%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
           ++ +I  +   A++  ++  ++N+SN  T G+          V       
Sbjct: 4  NSALSIATSGLNAVQNAMAVASNNVSNAGTSGYIKENANVQSTVAGNMGTG 54



 Score = 37.2 bits (84), Expect = 2.2,   Method: Composition-based stats.
 Identities = 13/173 (7%), Positives = 44/173 (25%), Gaps = 1/173 (0%)

Query: 71  GSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVP 130
              +   +  D    G   F+         + D    +    S  + + +  +       
Sbjct: 338 DGDVPGTSRTDLTPTGSVGFSQVMSVSSTYSDDPSKLLDSSTSG-TQTIQKVLSYGFGTT 396

Query: 131 IQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS 190
                  +         ++       T     + ++     ++ +  S       L   +
Sbjct: 397 SDSAGTSQTAAPSTNLGLTGTLSTGYTGNQGIISLATSLTAKQAATASDASSGLALSQTT 456

Query: 191 GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
             ++       S  +   EM  ++ L   + +   ++   +      +  I +
Sbjct: 457 QTSLTSNLSGTSTVSVDTEMANIVTLQNAYAANAKVVSTVQTMFSALLSAIGT 509


>gi|95929195|ref|ZP_01311939.1| protein of unknown function DUF1078-like [Desulfuromonas
          acetoxidans DSM 684]
 gi|95134693|gb|EAT16348.1| protein of unknown function DUF1078-like [Desulfuromonas
          acetoxidans DSM 684]
          Length = 111

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 14/83 (16%), Positives = 30/83 (36%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M  + +  ++   A   RL++ A+N++N+ T G+   +V  +E          QK     
Sbjct: 1  MIDAMSSAMSGLQAQTLRLNSTANNVANSQTEGYAPSQVTLAENEQGGVRAQLQKPVNGT 60

Query: 61 SGKEYLSKEVGSFISTGTELDFA 83
             +    +          +D  
Sbjct: 61 GDAQTAENQTSKVDLAKEMVDMM 83



 Score = 37.2 bits (84), Expect = 1.9,   Method: Composition-based stats.
 Identities = 5/38 (13%), Positives = 14/38 (36%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            S  +   EM  M+   Q +++    +   +    + +
Sbjct: 70  TSKVDLAKEMVDMMQTKQFYSANLKTVSVADSMSGDLL 107


>gi|255028426|ref|ZP_05300377.1| flagellar basal body rod protein FlgC [Listeria monocytogenes LO28]
          Length = 124

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 21/40 (52%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           G++  +N +   EM  ++   + + + T+ +  NEK M +
Sbjct: 78  GYVNYANVDMTAEMTNLMVGQKMYAANTSALQANEKMMEK 117


>gi|149908761|ref|ZP_01897422.1| LfgC [Moritella sp. PE36]
 gi|149808303|gb|EDM68242.1| LfgC [Moritella sp. PE36]
          Length = 140

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 20/43 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++  SN N++ EM  M+  ++ F S   ++          +R
Sbjct: 94  GYVFYSNVNAVAEMADMMSASRSFESSAEVMRRVNSMQQSLLR 136



 Score = 36.8 bits (83), Expect = 2.7,   Method: Composition-based stats.
 Identities = 14/99 (14%), Positives = 36/99 (36%), Gaps = 6/99 (6%)

Query: 7   IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           I  +   +   RL+TVA N++N ++        +  +K  FS +    +  ++   + V 
Sbjct: 9   IAGSGMRSQTLRLNTVASNLANVNSAASSEKEAYHALKPIFSTIYQTSQETLEVTGASVN 68

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
                 S++               +G  +++  +    +
Sbjct: 69  MLGVTRSQQAIERRYEPENTLANNDGYVFYSNVNAVAEM 107


>gi|148266109|ref|YP_001232815.1| flagellar hook-associated protein FlgK [Geobacter uraniireducens
           Rf4]
 gi|146399609|gb|ABQ28242.1| flagellar hook-associated protein FlgK [Geobacter uraniireducens
           Rf4]
          Length = 478

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 20/162 (12%), Positives = 39/162 (24%), Gaps = 8/162 (4%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53
            +    G  A  A +  L    +N++N +T G+             ++            
Sbjct: 4   NSLLETGRTALNAQKLALEVTGENITNVNTTGYSRQTTILETAPTTLERGFPLGSGVKVA 63

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113
                     +       +    G   + AL+       E     +      F  +    
Sbjct: 64  AVQRSYDGFLQTQIMGQNATYGQGKTSNSALQRVQQLFNEFTTDGLGVSLQNFFKSWQDL 123

Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI 155
            V+  G      + S   Q+       N       S   K +
Sbjct: 124 TVNPQGAPERQAVLSQGQQLVDNFHRINSNLNDVKSDMNKSL 165



 Score = 41.0 bits (94), Expect = 0.16,   Method: Composition-based stats.
 Identities = 6/39 (15%), Positives = 14/39 (35%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            S  +   E+  +I   + +     LI+   + +   I 
Sbjct: 437 ASGVSLDEELANLIKYQKAYEGAAKLINVGSEMLDTVIN 475


>gi|308071106|ref|YP_003872711.1| flagellar hook-associated protein [Paenibacillus polymyxa E681]
 gi|305860385|gb|ADM72173.1| Flagellar hook-associated protein [Paenibacillus polymyxa E681]
          Length = 526

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 6/38 (15%), Positives = 16/38 (42%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           S  +   EM  MI     +++ +  +   ++ + + I 
Sbjct: 482 SGVSLDEEMSNMIKFQHAYSAASRFMTTFDQLLDKLIN 519



 Score = 37.5 bits (85), Expect = 1.5,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 13/40 (32%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
                 +       L+T   N+SN +T G+    V    
Sbjct: 7  GIETAKRSLNTQTAALNTTGHNISNANTAGYSRQVVSMKA 46


>gi|268316362|ref|YP_003290081.1| flagellar basal body rod protein [Rhodothermus marinus DSM 4252]
 gi|262333896|gb|ACY47693.1| flagellar basal body rod protein [Rhodothermus marinus DSM 4252]
          Length = 112

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 34/110 (30%), Gaps = 9/110 (8%)

Query: 11  AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
           A  A   RL  +A N++N DT G++ + V F E +   ++ I               +  
Sbjct: 12  AMQAYTWRLKALAANIANLDTPGYQRVGVSFEEALQQARHQIPGLRQPEEVEPRMRMENT 71

Query: 71  GSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
              +                A    R  + TR  R       + ++    
Sbjct: 72  PPVLEDELME---------LADTQMRTQLTTRALREHFDLMRTAITGRTG 112


>gi|118581855|ref|YP_903105.1| flagellar hook-associated protein FlgK [Pelobacter propionicus DSM
           2379]
 gi|118504565|gb|ABL01048.1| flagellar hook-associated protein FlgK [Pelobacter propionicus DSM
           2379]
          Length = 456

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 5/38 (13%), Positives = 14/38 (36%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            S  +   E+  ++   + + +   LI    + M   +
Sbjct: 416 KSGVSLDEELTNLVMYQRSYQASAKLITTVTEMMDTLL 453



 Score = 40.6 bits (93), Expect = 0.17,   Method: Composition-based stats.
 Identities = 8/51 (15%), Positives = 18/51 (35%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
          ++  IG    +  +       +N++N +T G+   +V          N   
Sbjct: 5  SAMEIGKRGLIIYQVATEVTGENIANVNTEGYSRQRVILETSPPTTHNGFP 55


>gi|330875980|gb|EGH10129.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
          morsprunorum str. M302280PT]
 gi|330967087|gb|EGH67347.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
          actinidiae str. M302091]
          Length = 135

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 30/80 (37%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
            +  I   A     QR   +A+N+SN DT  F+   ++FS V+ A  +        +  
Sbjct: 6  DKALGIHEKALNFRAQRAEVLANNISNADTPNFKARDLEFSSVLAAENDKAQNGHFALNK 65

Query: 62 GKEYLSKEVGSFISTGTELD 81
                +  G     GT + 
Sbjct: 66 TNSRHIEAEGMGNDDGTLMY 85


>gi|115523571|ref|YP_780482.1| flagellar basal body rod protein FlgC [Rhodopseudomonas palustris
           BisA53]
 gi|115517518|gb|ABJ05502.1| flagellar basal-body rod protein FlgC [Rhodopseudomonas palustris
           BisA53]
          Length = 141

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 7/49 (14%), Positives = 19/49 (38%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
             G ++  N N + EM  M    + + +   +I    + +   +  + +
Sbjct: 93  AAGNVKYPNVNPLIEMTDMRDAQRSYEANLNIISATRRMVQRTLDILKA 141



 Score = 42.9 bits (99), Expect = 0.040,   Method: Composition-based stats.
 Identities = 10/59 (16%), Positives = 21/59 (35%), Gaps = 9/59 (15%)

Query: 1  MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKN 50
          M    S  I  +   A   R+  +A+N++N  +         +R     F+  +    +
Sbjct: 6  MDFSRSMAIATSGLRAQAGRMRVIAENIANAQSTAQTAGGDPYRRKVPTFTTALDRALD 64


>gi|308273186|emb|CBX29789.1| Flagellar basal-body rod protein flgC [uncultured Desulfobacterium
           sp.]
          Length = 140

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 20/46 (43%), Gaps = 1/46 (2%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G L   N +   EM  M+     F++  + I    + +L+A+  I 
Sbjct: 95  GCLSKPNVDLAVEMANMLMARNAFSANLSAIKSTRQMVLKAL-EIG 139



 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 9/31 (29%), Positives = 16/31 (51%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32
            S  I  +   A  +R+  +A+N+SN +T 
Sbjct: 4  MESLKISSSGLYAQRKRMDIIAENLSNIETT 34


>gi|301631994|ref|XP_002945076.1| PREDICTED: flagellar basal-body rod protein flgB-like [Xenopus
          (Silurana) tropicalis]
          Length = 141

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 26/77 (33%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69
           A +   +R   +A N++N DT G+     +F++ + A  +D    +             
Sbjct: 14 NALMLRAERQRVIASNIANADTPGYVARDFRFADALRAATDDGTALVRQRLGTDGTRHAG 73

Query: 70 VGSFISTGTELDFALEG 86
               +  T       G
Sbjct: 74 HIRLPAARTGEQPGTLG 90


>gi|293115684|ref|ZP_05792627.2| flagellar basal-body rod protein FlgB [Butyrivibrio crossotus DSM
           2876]
 gi|292808800|gb|EFF68005.1| flagellar basal-body rod protein FlgB [Butyrivibrio crossotus DSM
           2876]
          Length = 150

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 13/74 (17%), Positives = 28/74 (37%), Gaps = 2/74 (2%)

Query: 17  QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE--VGSFI 74
           +R   + +NMSN DT G++  ++ F  V+             +      +       +  
Sbjct: 39  RRSEVLNNNMSNVDTPGYKRQELSFESVLSDAVERAGSSSRNLTQTVRNIDFNCVRPTIY 98

Query: 75  STGTELDFALEGDA 88
           +    L + L+G+ 
Sbjct: 99  TDDANLSYRLDGNN 112


>gi|262273531|ref|ZP_06051345.1| flagellar basal-body rod protein FlgC [Grimontia hollisae CIP
           101886]
 gi|262222509|gb|EEY73820.1| flagellar basal-body rod protein FlgC [Grimontia hollisae CIP
           101886]
          Length = 126

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 23/46 (50%), Gaps = 1/46 (2%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G++  S  N + EM  M+  ++ F +   ++    +SM ++I  + 
Sbjct: 79  GYVFYSQVNPVEEMADMMSASRNFETNVDVMTRA-RSMQQSILRLG 123



 Score = 38.3 bits (87), Expect = 0.90,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 24/72 (33%), Gaps = 6/72 (8%)

Query: 12 QLALEQRLSTVADNMSNTDT------VGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65
            A   RL+ VA N++N D        G+R  +  F  V+    N     +  V    E 
Sbjct: 1  MAAQTVRLNAVASNLANADVVSGSEQTGYRAKRPVFETVMVDKGNGTQGAMVRVKEVLES 60

Query: 66 LSKEVGSFISTG 77
           +     +    
Sbjct: 61 DAPLQRRYEPNH 72


>gi|300024609|ref|YP_003757220.1| flagellar basal body rod protein [Hyphomicrobium denitrificans
          ATCC 51888]
 gi|299526430|gb|ADJ24899.1| flagellar basal body rod protein [Hyphomicrobium denitrificans
          ATCC 51888]
          Length = 125

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 20/33 (60%), Gaps = 1/33 (3%)

Query: 15 LEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVG 46
          L QR S ++ N++N +T G++   V+ F + + 
Sbjct: 17 LAQRQSVISQNVANANTPGYKARDVESFEDAMR 49


>gi|226313073|ref|YP_002772967.1| flagellar basal-body rod protein FlgB [Brevibacillus brevis NBRC
          100599]
 gi|226096021|dbj|BAH44463.1| flagellar basal-body rod protein FlgB [Brevibacillus brevis NBRC
          100599]
          Length = 136

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 24/62 (38%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          +  A   R  T+A+N++N DT  F++ +V F   +    N         A          
Sbjct: 13 SLDAATLRHRTIANNLANIDTPQFKSQQVIFESFLQDELNARAGNGKLEAYRTNQRHLPF 72

Query: 71 GS 72
          G+
Sbjct: 73 GN 74


>gi|197103407|ref|YP_002128785.1| putative flagellar basal-body rod protein FlgC [Phenylobacterium
          zucineum HLK1]
 gi|196480683|gb|ACG80210.1| putative flagellar basal-body rod protein FlgC [Phenylobacterium
          zucineum HLK1]
          Length = 141

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 11/80 (13%), Positives = 26/80 (32%), Gaps = 7/80 (8%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQKIS 57
            I   A  A + R+  +A+N++N+ T         +R     F+ +     +   Q + 
Sbjct: 12 MAIAAMALRAQQARMRIIAENIANSQTTAATPGGDPYRRQMPIFAPLKLEDGSVSVQLVR 71

Query: 58 FVASGKEYLSKEVGSFISTG 77
                 +  +      +  
Sbjct: 72 TEPDPTAFKKEYSPGHPAAD 91



 Score = 39.9 bits (91), Expect = 0.33,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 36/115 (31%), Gaps = 3/115 (2%)

Query: 129 VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED 188
           +   I                ++  + A + L    +S   VR E    +     +P   
Sbjct: 29  IAENIANSQTTAATPGGDPYRRQMPIFAPLKLEDGSVSVQLVRTEPDPTAFKKEYSPGHP 88

Query: 189 LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
            +      G++  SN  ++ E        + + +   +ID +       +R + S
Sbjct: 89  AADP---SGYVTLSNVETLVESLDFKAAQRAYEANLNVIDTSHAMEQSTMRLLQS 140


>gi|153953775|ref|YP_001394540.1| flagellar basal body rod protein FlgB [Clostridium kluyveri DSM
          555]
 gi|219854391|ref|YP_002471513.1| hypothetical protein CKR_1048 [Clostridium kluyveri NBRC 12016]
 gi|146346656|gb|EDK33192.1| FlgB [Clostridium kluyveri DSM 555]
 gi|219568115|dbj|BAH06099.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 133

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 10/35 (28%), Positives = 19/35 (54%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV 45
             A  +R   ++DN++N +T G++   V F E +
Sbjct: 19 GLDAASERSKAISDNLANVNTAGYKRKYVTFEESL 53


>gi|332162903|ref|YP_004299480.1| flagellar basal-body rod protein [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|318604250|emb|CBY25748.1| flagellar basal-body rod protein FlgC [Yersinia enterocolitica
           subsp. palearctica Y11]
 gi|325667133|gb|ADZ43777.1| Flagellar basal-body rod protein [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330863353|emb|CBX73476.1| flagellar basal-body rod protein flgC [Yersinia enterocolitica
           W22703]
          Length = 141

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 7/44 (15%), Positives = 20/44 (45%)

Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +G++     N + EM  M+  ++ F +   +++  +      +R
Sbjct: 94  QGYVFYPAVNVVSEMADMMSASRSFETNVEVLNSVKSMQQSVLR 137



 Score = 37.9 bits (86), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/96 (14%), Positives = 29/96 (30%), Gaps = 6/96 (6%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQK 55
             + +  +A  A   RL+ +A N++N ++        ++     FS V           
Sbjct: 4  NNIYRVSGSAMTAQTIRLNAIASNLANAESPAASAATVYKARSPVFSAVYSPRSATNPGG 63

Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA 91
          ++        + +  GS          A      F 
Sbjct: 64 VNGAQVQVLDVVETGGSVQRYEPNHPLANPQGYVFY 99


>gi|161503729|ref|YP_001570841.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160865076|gb|ABX21699.1| hypothetical protein SARI_01814 [Salmonella enterica subsp.
          arizonae serovar 62:z4,z23:--]
          Length = 553

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 9/52 (17%), Positives = 23/52 (44%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+TV++N++N +  G+       ++    +    
Sbjct: 1  MSSLINHAMSGLNAAQSALNTVSNNINNYNVAGYTRQTTILAQANSTLGAGG 52


>gi|120603704|ref|YP_968104.1| flagellar basal body rod protein FlgB [Desulfovibrio vulgaris
          DP4]
 gi|120563933|gb|ABM29677.1| flagellar basal-body rod protein FlgB [Desulfovibrio vulgaris
          DP4]
          Length = 136

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 19/39 (48%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50
               QR + V  N++N  T G++  +++F + + +   
Sbjct: 16 MDMQLQRQNVVMSNIANVRTPGYKPRELEFEKELQSALG 54


>gi|154175290|ref|YP_001408541.1| flagellar basal body rod protein FlgC [Campylobacter curvus 525.92]
 gi|112803036|gb|EAU00380.1| flagellar basal-body rod protein FlgC [Campylobacter curvus 525.92]
          Length = 167

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 8/45 (17%), Positives = 18/45 (40%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           G++   N N + EM  ++  T+ + +        +     AI  +
Sbjct: 118 GYVAFPNINPVIEMADLVEATRAYQANVAAFQSAKMIAQSAITLL 162



 Score = 40.2 bits (92), Expect = 0.23,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 17/40 (42%), Gaps = 6/40 (15%)

Query: 11 AQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44
             A   R++ ++ N++N  T     G  +R  +V F   
Sbjct: 13 GLSAQRFRMNVISSNIANAQTTRTAEGGPYRRQEVIFKAF 52


>gi|260768775|ref|ZP_05877709.1| flagellar hook-associated protein FlgK [Vibrio furnissii CIP
          102972]
 gi|260616805|gb|EEX41990.1| flagellar hook-associated protein FlgK [Vibrio furnissii CIP
          102972]
 gi|315180478|gb|ADT87392.1| hypothetical flagellar hook-associated protein [Vibrio furnissii
          NCTC 11218]
          Length = 456

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 12/81 (14%), Positives = 28/81 (34%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           + +NI L+  +A +  ++  A N +N ++ G+    V  S V+               +
Sbjct: 1  MSMYNIALSGAMANQVAMNVTAQNTANINSAGYSRKVVDQSAVIYGNAGPNSAGSGVSVT 60

Query: 62 GKEYLSKEVGSFISTGTELDF 82
              +S +           + 
Sbjct: 61 SIRRVSDQAAVERLRSANTEL 81


>gi|237752943|ref|ZP_04583423.1| flagellar hook-associated protein FlgK [Helicobacter winghamensis
           ATCC BAA-430]
 gi|229375210|gb|EEO25301.1| flagellar hook-associated protein FlgK [Helicobacter winghamensis
           ATCC BAA-430]
          Length = 608

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 3/35 (8%), Positives = 14/35 (40%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            +   E+  +I     +++   +I   ++ +   +
Sbjct: 570 VSVDDELVNLIRFQSGYSANAKMITTIDEMINTLL 604



 Score = 37.9 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 4/29 (13%), Positives = 11/29 (37%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTD 30
           +S N         +  +    +N++N +
Sbjct: 5  LSSLNTPYTGLTGHQVMVDVTGNNIANAN 33


>gi|289208111|ref|YP_003460177.1| flagellar basal-body rod protein FlgB [Thioalkalivibrio sp.
          K90mix]
 gi|288943742|gb|ADC71441.1| flagellar basal-body rod protein FlgB [Thioalkalivibrio sp.
          K90mix]
          Length = 136

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 28/85 (32%), Gaps = 4/85 (4%)

Query: 1  MQTSFNIGLA----AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56
          M  S +  +     A     +R+  +A N++N DT  ++   + F  V+ A   +     
Sbjct: 1  MSLSLDKAMGILPEAVNVRAKRMELLASNIANADTPNYKARDIDFRSVLQAAAGEGGNMP 60

Query: 57 SFVASGKEYLSKEVGSFISTGTELD 81
                    +   G    +   L 
Sbjct: 61 MASTHQGHIGAGGAGGANGSMETLY 85


>gi|154174839|ref|YP_001408540.1| flagellar basal body rod protein FlgB [Campylobacter curvus
          525.92]
 gi|112803089|gb|EAU00433.1| flagellar basal-body rod protein FlgB [Campylobacter curvus
          525.92]
          Length = 144

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 22/43 (51%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          AA  A E R   ++ N++N DT  ++   + F  V+    ++I
Sbjct: 15 AAMAAREMRQKLISGNIANIDTPFYKARDINFESVLRQKADEI 57


>gi|254419217|ref|ZP_05032941.1| flagellar basal-body rod protein FlgC [Brevundimonas sp. BAL3]
 gi|196185394|gb|EDX80370.1| flagellar basal-body rod protein FlgC [Brevundimonas sp. BAL3]
          Length = 128

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 17/118 (14%), Positives = 34/118 (28%), Gaps = 9/118 (7%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTD----TVG---FRTIKVKFS--EVVGAIKNDIDQK 55
             +  +A  A + R+  +A+N++N      T G   +R     F   EV GA    + + 
Sbjct: 1   MAVAASALKAQQSRMRVIAENIANAQSTARTPGGEPYRRQIPVFQAREVDGATGVTLAEV 60

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113
                  K        +  + G  +   ++                 +     T    
Sbjct: 61  RPDQGEFKMDYDPSHPAANAQGYVMRPNVDTLVEAMDMREAQRAYEANLNVIETARSM 118



 Score = 43.7 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 5/44 (11%), Positives = 17/44 (38%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            +G++   N +++ E   M    + + +   +I+         +
Sbjct: 80  AQGYVMRPNVDTLVEAMDMREAQRAYEANLNVIETARSMDSRTL 123


>gi|146311243|ref|YP_001176317.1| flagellar basal body rod protein FlgB [Enterobacter sp. 638]
 gi|145318119|gb|ABP60266.1| flagellar basal-body rod protein FlgB [Enterobacter sp. 638]
          Length = 138

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 26/66 (39%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   +A N++N DT G++   + FS  +  + +    + + VA          
Sbjct: 15 ALNLRAQRQEVLAGNIANADTPGYQARDMDFSSELKKVMDRGRAEGTGVALALTSSRHIP 74

Query: 71 GSFIST 76
             ++ 
Sbjct: 75 AQAMTA 80


>gi|317133491|ref|YP_004092805.1| flagellar basal-body rod protein FlgC [Ethanoligenens harbinense
          YUAN-3]
 gi|315471470|gb|ADU28074.1| flagellar basal-body rod protein FlgC [Ethanoligenens harbinense
          YUAN-3]
          Length = 143

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 6/56 (10%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKND 51
            + NI  +   A   R+  +++N++N DT     G  ++   V FSE      + 
Sbjct: 3  LNALNIPGSGLTAQRLRMDVISENLANQDTTETADGGPYQRKTVSFSERTQPTFDG 58



 Score = 41.8 bits (96), Expect = 0.084,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 19/37 (51%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           G++   N +++ EM  ++  ++ +++  T  +  +  
Sbjct: 98  GYVRLPNVDTVTEMTDLMESSRSYSADVTAFNALKGM 134


>gi|238788320|ref|ZP_04632114.1| Flagellar hook-associated protein 1 [Yersinia frederiksenii ATCC
          33641]
 gi|238723566|gb|EEQ15212.1| Flagellar hook-associated protein 1 [Yersinia frederiksenii ATCC
          33641]
          Length = 550

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 20/39 (51%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
           N  ++   A +  LSTV++N+SN    G+      F++
Sbjct: 1  MNTAMSGLSAAQYALSTVSNNISNYQVAGYNRQNTIFAQ 39


>gi|330961205|gb|EGH61465.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
          maculicola str. ES4326]
          Length = 686

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 21/38 (55%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39
           +  +IGL+   A    ++T+ +N +N DT G+   +V
Sbjct: 1  MSLISIGLSGINASSAAINTIGNNTANVDTAGYSRQQV 38


>gi|295097206|emb|CBK86296.1| flagellar basal-body rod protein FlgB [Enterobacter cloacae
          subsp. cloacae NCTC 9394]
          Length = 136

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 12/78 (15%), Positives = 27/78 (34%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A   L +R   +A N++N DT G++   + FS+ +     +         +       + 
Sbjct: 15 ALGLLSRRQEVLASNIANADTPGYQARDIDFSQQLKNALGNKPASGPVTMALTSSKHMQG 74

Query: 71 GSFISTGTELDFALEGDA 88
                  +L + +    
Sbjct: 75 KKMPFDDAQLLYRVPDQP 92


>gi|257484952|ref|ZP_05638993.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
          tabaci ATCC 11528]
 gi|298487860|ref|ZP_07005900.1| Flagellar basal-body rod protein flgB [Pseudomonas savastanoi pv.
          savastanoi NCPPB 3335]
 gi|298157585|gb|EFH98665.1| Flagellar basal-body rod protein flgB [Pseudomonas savastanoi pv.
          savastanoi NCPPB 3335]
 gi|331011039|gb|EGH91095.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
          tabaci ATCC 11528]
          Length = 135

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 30/80 (37%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
            +  I   A     QR   +A+N+SN DT  F+   + FS V+ A  + +      +  
Sbjct: 6  DKALGIHEKALNFRAQRAEVLANNISNADTPNFKARDLDFSSVLAAENDKVQNGHFALNK 65

Query: 62 GKEYLSKEVGSFISTGTELD 81
                +  G     GT L 
Sbjct: 66 TNSRHIEAEGMGNDDGTLLY 85


>gi|182412215|ref|YP_001817281.1| flagellar hook-associated protein FlgK [Opitutus terrae PB90-1]
 gi|177839429|gb|ACB73681.1| flagellar hook-associated protein FlgK [Opitutus terrae PB90-1]
          Length = 484

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 17/157 (10%), Positives = 44/157 (28%), Gaps = 18/157 (11%)

Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV------IAT 157
           G     D  + +  +G         +   +       N G  G  +    V      +AT
Sbjct: 327 GGVAADDFFATLDGNGDPITAGTFQLASGLTAFSLHANDGTAGAPAGDNSVALAIAQLAT 386

Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVK---RGFLED---------SNAN 205
               +       +    S    +      +  +G T +   +  +E          S  +
Sbjct: 387 RRFSTTGAPPDLIDGTLSSFYSSAVSGLGQATAGATTRLNSQESIEQLVRSQRDAVSGVS 446

Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
              E+  ++   + F + + +    +K +   +  + 
Sbjct: 447 LDEELSDLLKYQRAFQASSRVFQTIDKLLGVVVEQLG 483



 Score = 35.6 bits (80), Expect = 6.9,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 18/40 (45%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
          S N  + A  A  + + T   N++N +   +   +V + +
Sbjct: 7  SLNSTVGALSAHSRSIETAGKNLANVNNASYARQRVVYGD 46


>gi|57238490|ref|YP_179621.1| flagellar hook-associated protein FlgK [Campylobacter jejuni
          RM1221]
 gi|57167294|gb|AAW36073.1| flagellar hook-associated protein FlgK, putative [Campylobacter
          jejuni RM1221]
 gi|315058921|gb|ADT73250.1| Flagellar hook-associated protein flgK [Campylobacter jejuni
          subsp. jejuni S3]
          Length = 608

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 11/78 (14%), Positives = 23/78 (29%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
             G+    A E +++T  +N+SN +   +   +V  +         +            
Sbjct: 7  LYTGVTGLKASEVQIATTGNNISNANATFYTRQRVVQTTNGYITTGGVQVGTGTAVESIV 66

Query: 65 YLSKEVGSFISTGTELDF 82
           L  E   +   G     
Sbjct: 67 RLHDEYSYYKLKGASTQL 84



 Score = 39.9 bits (91), Expect = 0.33,   Method: Composition-based stats.
 Identities = 5/48 (10%), Positives = 18/48 (37%)

Query: 191 GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
             +V   +   S  N+  E+  +I     + +   ++   ++ +   +
Sbjct: 557 YNSVYSEYQSKSGVNTNEELAALIQYQSSYGAAAKIVSTVDQMLDTLL 604


>gi|332531624|ref|ZP_08407521.1| flagellar hook-associated protein FlgK [Hylemonella gracilis ATCC
          19624]
 gi|332038987|gb|EGI75416.1| flagellar hook-associated protein FlgK [Hylemonella gracilis ATCC
          19624]
          Length = 701

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 9/71 (12%), Positives = 20/71 (28%), Gaps = 1/71 (1%)

Query: 13 LALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGS 72
             +  L+ + +N++N +T G+   +     + G            V         +   
Sbjct: 13 TTNQNVLNVIGNNIANVNTEGYSRQQAILKSIPGQYM-GTGYYGKGVEISTVTRIYDTFL 71

Query: 73 FISTGTELDFA 83
               T    A
Sbjct: 72 TRQAATTKSVA 82



 Score = 35.2 bits (79), Expect = 7.0,   Method: Composition-based stats.
 Identities = 15/164 (9%), Positives = 42/164 (25%), Gaps = 6/164 (3%)

Query: 83  ALEGDAWFALESPRGIILTRDGRFKVTDD---GSLVSASGKYPVLDMASVPIQIPQKDEI 139
           A  G+ +            R            G  ++  G     D  +V      + + 
Sbjct: 541 ATAGELYSYTPGNPIEADGRTTNLPFDPTTEWGWSLTLKGVPQPGDSFTVKTNPYTQLDA 600

Query: 140 FNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFL 199
            N     ++               D     +    +          + +   V++++   
Sbjct: 601 ANAQAMMDLRDMKLF---DKAPLTDGYASLIADIGTKTLGAKQTAAVSEQIAVSIEQDRT 657

Query: 200 EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
             S  N   E  +++   Q + +    +   +      I ++ +
Sbjct: 658 AISGVNLDEEAARLLQFQQAYQAAGKAMQVAQTLFDTLIASVQA 701


>gi|157165285|ref|YP_001467064.1| flagellar basal body rod protein FlgC [Campylobacter concisus
           13826]
 gi|112800440|gb|EAT97784.1| flagellar basal-body rod protein FlgC [Campylobacter concisus
           13826]
          Length = 166

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 18/45 (40%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           G++   N N + EM  ++  T+ + +        +     AI  I
Sbjct: 118 GYVAFPNINPVIEMADLLEATRAYQANVASFQNAKTIAQSAISLI 162



 Score = 43.3 bits (100), Expect = 0.031,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 6/40 (15%)

Query: 11 AQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44
             A   R++ ++ N++N  T     G  +R  +V F E+
Sbjct: 13 GLSAQRFRMNVISSNIANAQTTRTAEGGPYRRQEVIFKEM 52


>gi|82702459|ref|YP_412025.1| flagellar hook-associated protein FlgK [Nitrosospira multiformis
          ATCC 25196]
 gi|82410524|gb|ABB74633.1| conserved hypothetical protein [Nitrosospira multiformis ATCC
          25196]
          Length = 638

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 30/83 (36%), Gaps = 3/83 (3%)

Query: 1  MQTSFN-IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV--KFSEVVGAIKNDIDQKIS 57
          M      IGL+A  A ++ L     N+SNT T G+   +V    S+        I Q + 
Sbjct: 1  MSNGIFGIGLSALQAAQRGLLVTGHNISNTATPGYTRQQVIQSTSDARATGSGFIGQGVQ 60

Query: 58 FVASGKEYLSKEVGSFISTGTEL 80
               + Y           GTE 
Sbjct: 61 VDTVKRAYNQFLSRQVAQAGTES 83



 Score = 39.5 bits (90), Expect = 0.39,   Method: Composition-based stats.
 Identities = 17/147 (11%), Positives = 40/147 (27%), Gaps = 7/147 (4%)

Query: 94  SPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK 153
           +P  +  T  G       G  V  +G     D  S+        +  N    G +     
Sbjct: 493 NPASVPFTAGGPITFN--GWTVQITGTPQPGDTFSIGPNTDGVADNRNALLLGALQSSNT 550

Query: 154 VIATMGLYSVDMSQ--GFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMG 211
           + A    Y     Q    +  +   +                +++    ++  N   E  
Sbjct: 551 LAAGGASYRGAYGQLVSLMGNKTRELEVTAGAQAALLTQTRALQQS---EAGVNLDEEAA 607

Query: 212 QMIHLTQKFNSITTLIDENEKSMLEAI 238
            ++   Q + + + +I    +     +
Sbjct: 608 NLLRYQQAYQAASKVIQTANQMFDALL 634


>gi|87119679|ref|ZP_01075576.1| flagellar basal-body rod protein FlgB [Marinomonas sp. MED121]
 gi|86165155|gb|EAQ66423.1| flagellar basal-body rod protein FlgB [Marinomonas sp. MED121]
          Length = 133

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 4/56 (7%)

Query: 1  MQTSFNIGLAA----QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M  SF    A           R + +A+N++N DT  ++   + FS  +   +ND 
Sbjct: 1  MAISFESAFAGHDKFLKFRSDRSAVLANNIANADTPNYKARDISFSSAMSKAQNDA 56


>gi|291617017|ref|YP_003519759.1| FlgB [Pantoea ananatis LMG 20103]
 gi|291152047|gb|ADD76631.1| FlgB [Pantoea ananatis LMG 20103]
 gi|327393468|dbj|BAK10890.1| flagellar basal-body rod protein FlgB [Pantoea ananatis AJ13355]
          Length = 157

 Score = 44.1 bits (102), Expect = 0.019,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 28/78 (35%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
             + + G  A     QR   +A N++N DT G++   + F+  +     +   + S +A 
Sbjct: 26  DAALHFGTEALNLRAQRQEILASNIANADTPGYQARDIDFASELNRAMANGRAEGSSLAL 85

Query: 62  GKEYLSKEVGSFISTGTE 79
                        S  + 
Sbjct: 86  KVTSARHIEAQTNSAPSM 103


>gi|32266375|ref|NP_860407.1| flagellar hook-associated protein FlgK [Helicobacter hepaticus ATCC
           51449]
 gi|32262425|gb|AAP77473.1| flagellar hook-associated protein FlgK [Helicobacter hepaticus ATCC
           51449]
          Length = 606

 Score = 44.1 bits (102), Expect = 0.019,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 23/72 (31%)

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
           Q    R  +           +D     VK+  L  S  +   EM  +I     + +   +
Sbjct: 531 QFLAGRVANQTEATQRTKETKDAVLSAVKKEHLAISQVSLDEEMVNLIKFQGGYAANAKV 590

Query: 227 IDENEKSMLEAI 238
           I   ++ +   +
Sbjct: 591 ITTIDRMIETLL 602



 Score = 38.7 bits (88), Expect = 0.66,   Method: Composition-based stats.
 Identities = 6/29 (20%), Positives = 11/29 (37%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTD 30
           +S N       A +  +    +N+SN  
Sbjct: 5  LSSLNTSYTGLQAHQLMVDVTGNNISNAS 33


>gi|331269311|ref|YP_004395803.1| flagellar basal-body rod protein FlgB [Clostridium botulinum
          BKT015925]
 gi|329125861|gb|AEB75806.1| flagellar basal-body rod protein FlgB [Clostridium botulinum
          BKT015925]
          Length = 134

 Score = 44.1 bits (102), Expect = 0.019,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 24/43 (55%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
          +  A  +R + + +N+SN +T G++   V F + +   K+ ++
Sbjct: 19 SLNATAKRKNVINNNISNFNTKGYKRSYVTFEDSLKESKDKLN 61


>gi|262276410|ref|ZP_06054219.1| flagellar hook-associated protein FlgK [Grimontia hollisae CIP
           101886]
 gi|262220218|gb|EEY71534.1| flagellar hook-associated protein FlgK [Grimontia hollisae CIP
           101886]
          Length = 625

 Score = 44.1 bits (102), Expect = 0.019,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 38/114 (33%), Gaps = 2/114 (1%)

Query: 11  AQLALEQRLSTVADNMSNTDTVGFRTIKVKFS--EVVGAIKNDIDQKISFVASGKEYLSK 68
             L  +++L+T   N+SN +T G+    V+    +      N   Q +   A  + Y   
Sbjct: 12  GVLTAQRQLNTTGHNISNVNTDGYSRQSVEQRANDSAYWSANQWGQGVHAAAVRRNYDKF 71

Query: 69  EVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYP 122
            V  +  T + L  A   ++   +         +     + +    V      P
Sbjct: 72  AVNEYNITTSALAHAQTRNSQLTMLDDMMSHAAKKIPENMNEFYGAVKGLADSP 125



 Score = 39.9 bits (91), Expect = 0.33,   Method: Composition-based stats.
 Identities = 5/40 (12%), Positives = 14/40 (35%)

Query: 200 EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           E S  N   E   M+     + + + ++    ++    + 
Sbjct: 583 EISGVNLDEEAANMMKFQHAYMASSRIMTAANETFETLLN 622


>gi|238751759|ref|ZP_04613247.1| Flagellar basal-body rod protein flgB [Yersinia rohdei ATCC
          43380]
 gi|238710030|gb|EEQ02260.1| Flagellar basal-body rod protein flgB [Yersinia rohdei ATCC
          43380]
          Length = 137

 Score = 44.1 bits (102), Expect = 0.019,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 24/65 (36%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   ++ N++N DT GF+   + FS  +  +        + V+          
Sbjct: 15 ALNLRAQRQEILSSNIANADTPGFQARDIDFSSQLQKVMEQGRVNGTGVSLSLTSARHIP 74

Query: 71 GSFIS 75
           S + 
Sbjct: 75 ASTVQ 79


>gi|225849064|ref|YP_002729228.1| flagellar hook-associated protein FlgK [Sulfurihydrogenibium
           azorense Az-Fu1]
 gi|225644050|gb|ACN99100.1| flagellar hook-associated protein FlgK [Sulfurihydrogenibium
           azorense Az-Fu1]
          Length = 483

 Score = 44.1 bits (102), Expect = 0.019,   Method: Composition-based stats.
 Identities = 19/202 (9%), Positives = 54/202 (26%), Gaps = 7/202 (3%)

Query: 40  KFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
            F+ V   + N + +K   +          +    S+          + +  +  P+ + 
Sbjct: 284 DFTTVFATVFNKVHKKGYGLDGSTNLDFFTIDPSKSSTKID----ASNIYLNITDPKKVA 339

Query: 100 LTRDGRFKV--TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157
           L ++  +      +G  +        +   +    +    E   +      S     I  
Sbjct: 340 LAQNSTYLNSDNTNGKDLLGLKNNIRVLYTNPSQPVLTPAEEAALQSSLNDSTNYTYIKD 399

Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217
                   ++  V   +S  S               +       +  N   E+  +  L 
Sbjct: 400 HTFAEFYNTK-LVADISSTSSYIKQQQQNNKYLYDAITEKMKNIAGVNMDEELINLSKLQ 458

Query: 218 QKFNSITTLIDENEKSMLEAIR 239
           + + +   +I   ++ M   + 
Sbjct: 459 RSYQASARIITVTDELMQTILN 480


>gi|66046700|ref|YP_236541.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
          syringae B728a]
 gi|63257407|gb|AAY38503.1| Flagellar basal body rod protein:Protein of unknown function
          DUF1078 [Pseudomonas syringae pv. syringae B728a]
          Length = 686

 Score = 44.1 bits (102), Expect = 0.019,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 35/97 (36%), Gaps = 1/97 (1%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           +  +IGL+   A    ++T+ +N +N DT G+   +V  +     I            +
Sbjct: 1  MSLISIGLSGINASSAAINTIGNNTANVDTAGYSRQQVL-TTASAQIALGQGVGYIGTGT 59

Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98
              + +   S++ T  +   AL  DA          
Sbjct: 60 TLSDVRRIYNSYLDTQLQSSTALSADALAYSGQASKT 96


>gi|16799794|ref|NP_470062.1| flagellar basal body rod protein FlgC [Listeria innocua Clip11262]
 gi|16802753|ref|NP_464238.1| flagellar basal body rod protein FlgC [Listeria monocytogenes
           EGD-e]
 gi|46906962|ref|YP_013351.1| flagellar basal body rod protein FlgC [Listeria monocytogenes
           serotype 4b str. F2365]
 gi|47091674|ref|ZP_00229470.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes str.
           4b H7858]
 gi|47095277|ref|ZP_00232888.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes str.
           1/2a F6854]
 gi|217965191|ref|YP_002350869.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes
           HCC23]
 gi|224498793|ref|ZP_03667142.1| flagellar basal body rod protein FlgC [Listeria monocytogenes
           Finland 1988]
 gi|224501984|ref|ZP_03670291.1| flagellar basal body rod protein FlgC [Listeria monocytogenes FSL
           R2-561]
 gi|226223342|ref|YP_002757449.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes
           Clip81459]
 gi|254824009|ref|ZP_05229010.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL
           J1-194]
 gi|254829368|ref|ZP_05234055.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL
           N3-165]
 gi|254830298|ref|ZP_05234953.1| flagellar basal body rod protein FlgC [Listeria monocytogenes
           10403S]
 gi|254900053|ref|ZP_05259977.1| flagellar basal body rod protein FlgC [Listeria monocytogenes
           J0161]
 gi|254911394|ref|ZP_05261406.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes
           J2818]
 gi|254932009|ref|ZP_05265368.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes
           HPB2262]
 gi|254935721|ref|ZP_05267418.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes
           F6900]
 gi|255022492|ref|ZP_05294478.1| flagellar basal body rod protein FlgC [Listeria monocytogenes FSL
           J1-208]
 gi|255025679|ref|ZP_05297665.1| flagellar basal body rod protein FlgC [Listeria monocytogenes FSL
           J2-003]
 gi|284801041|ref|YP_003412906.1| flagellar basal body rod protein FlgC [Listeria monocytogenes
           08-5578]
 gi|284994183|ref|YP_003415951.1| flagellar basal body rod protein FlgC [Listeria monocytogenes
           08-5923]
 gi|290894009|ref|ZP_06556984.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL
           J2-071]
 gi|16410100|emb|CAC98789.1| lmo0711 [Listeria monocytogenes EGD-e]
 gi|16413171|emb|CAC95951.1| lin0719 [Listeria innocua Clip11262]
 gi|46880228|gb|AAT03528.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes
           serotype 4b str. F2365]
 gi|47016348|gb|EAL07270.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes str.
           1/2a F6854]
 gi|47019993|gb|EAL10730.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes str.
           4b H7858]
 gi|217334461|gb|ACK40255.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes
           HCC23]
 gi|225875804|emb|CAS04507.1| Putative flagellar basal-body rod protein FlgC [Listeria
           monocytogenes serotype 4b str. CLIP 80459]
 gi|258601782|gb|EEW15107.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL
           N3-165]
 gi|258608305|gb|EEW20913.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes
           F6900]
 gi|284056603|gb|ADB67544.1| flagellar basal body rod protein FlgC [Listeria monocytogenes
           08-5578]
 gi|284059650|gb|ADB70589.1| flagellar basal body rod protein FlgC [Listeria monocytogenes
           08-5923]
 gi|290556455|gb|EFD89994.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL
           J2-071]
 gi|293583560|gb|EFF95592.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes
           HPB2262]
 gi|293589332|gb|EFF97666.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes
           J2818]
 gi|293593236|gb|EFG00997.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL
           J1-194]
 gi|307570250|emb|CAR83429.1| flagellar basal-body rod protein [Listeria monocytogenes L99]
 gi|313610106|gb|EFR85431.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL
           F2-208]
 gi|328467276|gb|EGF38356.1| flagellar basal body rod protein FlgC [Listeria monocytogenes 1816]
 gi|328475672|gb|EGF46421.1| flagellar basal body rod protein FlgC [Listeria monocytogenes 220]
 gi|332311135|gb|EGJ24230.1| Flagellar basal-body rod protein FlgC [Listeria monocytogenes str.
           Scott A]
          Length = 136

 Score = 44.1 bits (102), Expect = 0.019,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 21/40 (52%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           G++  +N +   EM  ++   + + + T+ +  NEK M +
Sbjct: 90  GYVNYANVDMTAEMTNLMVGQKMYAANTSALQANEKMMEK 129



 Score = 39.1 bits (89), Expect = 0.62,   Method: Composition-based stats.
 Identities = 8/30 (26%), Positives = 15/30 (50%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTD 30
          M    N   +A  A +Q +   ++N++N D
Sbjct: 1  MFEGINTSGSALNAAKQWMEVSSNNIANAD 30


>gi|317133492|ref|YP_004092806.1| flagellar basal-body rod protein FlgB [Ethanoligenens harbinense
           YUAN-3]
 gi|315471471|gb|ADU28075.1| flagellar basal-body rod protein FlgB [Ethanoligenens harbinense
           YUAN-3]
          Length = 125

 Score = 44.1 bits (102), Expect = 0.019,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 40/102 (39%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           S + G  A  AL QR + ++DN++N DT G++   V F + +    +D       + S  
Sbjct: 9   SMDAGTKAIDALWQRSNVISDNVANADTPGYQQKSVSFEDQLSQAISDGSLSAGELDSVS 68

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGR 105
             +  E G+  S+ +                 +   LTR   
Sbjct: 69  PQVQVESGTISSSDSNGVDMETQMVELMRNQLQYSYLTRGVS 110


>gi|254463222|ref|ZP_05076638.1| flagellar basal-body rod protein FlgC [Rhodobacterales bacterium
          HTCC2083]
 gi|206679811|gb|EDZ44298.1| flagellar basal-body rod protein FlgC [Rhodobacteraceae bacterium
          HTCC2083]
          Length = 126

 Score = 44.1 bits (102), Expect = 0.019,   Method: Composition-based stats.
 Identities = 11/31 (35%), Positives = 16/31 (51%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKF 41
             A   RL  V++N++N DT G+    V F
Sbjct: 14 GLKAQSARLRHVSENIANADTPGYHRKIVSF 44



 Score = 44.1 bits (102), Expect = 0.019,   Method: Composition-based stats.
 Identities = 5/42 (11%), Positives = 16/42 (38%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            SN + + E+       + + +   ++D+  +     I  + 
Sbjct: 84  SSNVDLIIEIADAREAQRSYEANLKMLDQTRQMSSSLIELLR 125


>gi|187925764|ref|YP_001897406.1| flagellar basal body rod protein FlgB [Burkholderia phytofirmans
          PsJN]
 gi|187716958|gb|ACD18182.1| flagellar basal-body rod protein FlgB [Burkholderia phytofirmans
          PsJN]
          Length = 164

 Score = 44.1 bits (102), Expect = 0.019,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 27/70 (38%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A      R   ++ N++N DT G++   V F+  +              AS    L+   
Sbjct: 15 ALDVRAYRQELLSSNIANADTPGYKARDVDFASSLAGALKKSGSATGTAASNNATLAMTQ 74

Query: 71 GSFISTGTEL 80
           + +++G  +
Sbjct: 75 PAGVTSGMSM 84


>gi|116872100|ref|YP_848881.1| flagellar basal body rod protein FlgC [Listeria welshimeri serovar
           6b str. SLCC5334]
 gi|116740978|emb|CAK20098.1| flagellar basal-body rod protein FlgC [Listeria welshimeri serovar
           6b str. SLCC5334]
          Length = 136

 Score = 44.1 bits (102), Expect = 0.019,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 21/40 (52%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           G++  +N +   EM  ++   + + + T+ +  NEK M +
Sbjct: 90  GYVNYANVDMTAEMTNLMVGQKMYAANTSALQANEKMMEK 129



 Score = 38.7 bits (88), Expect = 0.63,   Method: Composition-based stats.
 Identities = 8/30 (26%), Positives = 15/30 (50%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTD 30
          M    N   +A  A +Q +   ++N++N D
Sbjct: 1  MFEGINTSGSALNAAKQWMEVSSNNIANAD 30


>gi|157164065|ref|YP_001467063.1| flagellar basal body rod protein FlgB [Campylobacter concisus
          13826]
 gi|112800415|gb|EAT97759.1| flagellar basal-body rod protein FlgB [Campylobacter concisus
          13826]
          Length = 144

 Score = 44.1 bits (102), Expect = 0.019,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 23/43 (53%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          +A    E R   ++ N++N DT  ++   V+F +V+    N+I
Sbjct: 15 SALAGRELRQKLISGNLANVDTPFYKARDVRFEDVLREKANEI 57


>gi|269138579|ref|YP_003295279.1| flagellar basal-body rod protein [Edwardsiella tarda EIB202]
 gi|267984239|gb|ACY84068.1| flagellar basal-body rod protein [Edwardsiella tarda EIB202]
 gi|304558589|gb|ADM41253.1| Flagellar basal-body rod protein FlgB [Edwardsiella tarda FL6-60]
          Length = 137

 Score = 44.1 bits (102), Expect = 0.019,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 23/65 (35%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   +A N++N DT G++   + F+  +  +        S +A          
Sbjct: 15 ALNLRAQRQEILAANIANADTPGYQARDIDFASQLSRVLEQGRPDGSGIALSLTSSRHIP 74

Query: 71 GSFIS 75
             + 
Sbjct: 75 AQTLQ 79


>gi|224417868|ref|ZP_03655874.1| flagellar hook-associated protein FlgK [Helicobacter canadensis MIT
           98-5491]
 gi|253827207|ref|ZP_04870092.1| flagellar hook-associated protein [Helicobacter canadensis MIT
           98-5491]
 gi|313141411|ref|ZP_07803604.1| flagellar hook-protein FlgK [Helicobacter canadensis MIT 98-5491]
 gi|253510613|gb|EES89272.1| flagellar hook-associated protein [Helicobacter canadensis MIT
           98-5491]
 gi|313130442|gb|EFR48059.1| flagellar hook-protein FlgK [Helicobacter canadensis MIT 98-5491]
          Length = 609

 Score = 44.1 bits (102), Expect = 0.019,   Method: Composition-based stats.
 Identities = 5/67 (7%), Positives = 26/67 (38%)

Query: 172 RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231
           + +S           ++   +++K+ +   S  +   E+  +I     +++   ++   +
Sbjct: 539 KVSSQTESTQITLETKEAVYISIKQEYKAISEVSVDDELINLIKYQSGYSANAKMVSTID 598

Query: 232 KSMLEAI 238
           + +   +
Sbjct: 599 EMLNTLL 605



 Score = 37.9 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 6/29 (20%), Positives = 14/29 (48%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTD 30
           +S N         +  + TV++N++N +
Sbjct: 5  LSSLNTPYTGLTGHQVMVDTVSNNIANAN 33


>gi|218230982|ref|YP_002366429.1| flagellar basal body rod protein FlgC [Bacillus cereus B4264]
 gi|218158939|gb|ACK58931.1| flagellar basal-body rod protein FlgC [Bacillus cereus B4264]
          Length = 137

 Score = 44.1 bits (102), Expect = 0.019,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 22/40 (55%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           G++   N +   EM  ++   + + + T++++ N+K + +
Sbjct: 91  GYVRYPNIDVTAEMTNVMVAQKMYEANTSVLNANKKMLDK 130



 Score = 42.5 bits (98), Expect = 0.054,   Method: Composition-based stats.
 Identities = 5/33 (15%), Positives = 13/33 (39%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG 33
          M  + N   +      + +   ++N+ N +T  
Sbjct: 1  MFQAINASGSGLTTARKWMEVTSNNIVNANTTA 33


>gi|116250480|ref|YP_766318.1| flagellar basal body rod protein FlgC [Rhizobium leguminosarum bv.
           viciae 3841]
 gi|115255128|emb|CAK06202.1| putative flagellar basal-body rod protein flgc (putative proximal
           rod protein) [Rhizobium leguminosarum bv. viciae 3841]
          Length = 138

 Score = 44.1 bits (102), Expect = 0.019,   Method: Composition-based stats.
 Identities = 15/101 (14%), Positives = 32/101 (31%)

Query: 143 GEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDS 202
              G    + K I              V  +  G+      T  +  +    ++G ++  
Sbjct: 37  DTPGADPYRRKTITFGQQMDRSNGVETVGVKKVGVDEGDFSTEFDPSNPAADQKGVVKLP 96

Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           N N + EM  M    + +++    I +    +   I  + S
Sbjct: 97  NVNILVEMADMREANRSYDANLQTIKQTRDLISSTIDLLKS 137



 Score = 41.8 bits (96), Expect = 0.080,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 22/54 (40%), Gaps = 7/54 (12%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNT----DTVG---FRTIKVKFSEVVGAIKN 50
          +  I  +   A   RL  V++N++N     DT G   +R   + F + +     
Sbjct: 7  AMKIAGSGLEAQSTRLRIVSENIANARSTGDTPGADPYRRKTITFGQQMDRSNG 60


>gi|74317646|ref|YP_315386.1| flagellar hook-associated protein FlgK [Thiobacillus
          denitrificans ATCC 25259]
 gi|74057141|gb|AAZ97581.1| Flagellar hook-associated protein [Thiobacillus denitrificans
          ATCC 25259]
          Length = 629

 Score = 44.1 bits (102), Expect = 0.019,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 19/48 (39%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50
          +   IG +A  A +  LST   N++N  T G+    V     +     
Sbjct: 4  SILGIGQSALAAAQAGLSTTGHNIANASTPGYSRQVVVQGAALPQNFG 51



 Score = 38.7 bits (88), Expect = 0.70,   Method: Composition-based stats.
 Identities = 4/38 (10%), Positives = 12/38 (31%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           S  N   E   ++   Q + +   ++    +     + 
Sbjct: 589 SGVNLDEEATNLLRYQQAYQAAAKVMQVASEMFDALLT 626


>gi|90422625|ref|YP_530995.1| flagellar hook-associated protein FlgK [Rhodopseudomonas palustris
           BisB18]
 gi|90104639|gb|ABD86676.1| Flagellar hook-associated protein [Rhodopseudomonas palustris
           BisB18]
          Length = 490

 Score = 44.1 bits (102), Expect = 0.019,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 22/44 (50%), Gaps = 3/44 (6%)

Query: 202 SNANSM---YEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           SN N +    EM  M+ + + +++ + LI   ++ + + +  + 
Sbjct: 447 SNVNGVNMDDEMTFMLQVERTYSASSKLISAVDQMLKDLLAAVG 490


>gi|205356101|ref|ZP_03222868.1| putative flagellar hooK associated protein [Campylobacter jejuni
          subsp. jejuni CG8421]
 gi|205345944|gb|EDZ32580.1| putative flagellar hooK associated protein [Campylobacter jejuni
          subsp. jejuni CG8421]
          Length = 608

 Score = 44.1 bits (102), Expect = 0.019,   Method: Composition-based stats.
 Identities = 11/78 (14%), Positives = 23/78 (29%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
             G+    A E +++T  +N+SN +   +   +V  +         +            
Sbjct: 7  LYTGVTGLKASEVQIATTGNNISNANATFYTRQRVVQTTNGYITTGGVQVGTGTAVESIV 66

Query: 65 YLSKEVGSFISTGTELDF 82
           L  E   +   G     
Sbjct: 67 RLHDEYSYYKLKGASTQL 84



 Score = 39.9 bits (91), Expect = 0.36,   Method: Composition-based stats.
 Identities = 5/48 (10%), Positives = 18/48 (37%)

Query: 191 GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
             +V   +   S  N+  E+  +I     + +   ++   ++ +   +
Sbjct: 557 YNSVYSEYQSKSGVNTNEELAALIQYQSSYGAAAKIVSTVDQMLDTLL 604


>gi|157415691|ref|YP_001482947.1| flagellar hook-associated protein FlgK [Campylobacter jejuni
          subsp. jejuni 81116]
 gi|157386655|gb|ABV52970.1| flagellar hook-associated protein FlgK, putative [Campylobacter
          jejuni subsp. jejuni 81116]
 gi|307748332|gb|ADN91602.1| Putative flagellar hook-associated protein FlgK [Campylobacter
          jejuni subsp. jejuni M1]
 gi|315930976|gb|EFV09951.1| flagellar hook-associated protein FlgK [Campylobacter jejuni
          subsp. jejuni 327]
          Length = 608

 Score = 44.1 bits (102), Expect = 0.019,   Method: Composition-based stats.
 Identities = 11/78 (14%), Positives = 23/78 (29%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
             G+    A E +++T  +N+SN +   +   +V  +         +            
Sbjct: 7  LYTGVTGLKASEVQIATTGNNISNANATFYTRQRVVQTTNGYITTGGVQVGTGTAVESIV 66

Query: 65 YLSKEVGSFISTGTELDF 82
           L  E   +   G     
Sbjct: 67 RLHDEYSYYKLKGASTQL 84



 Score = 39.9 bits (91), Expect = 0.36,   Method: Composition-based stats.
 Identities = 5/48 (10%), Positives = 18/48 (37%)

Query: 191 GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
             +V   +   S  N+  E+  +I     + +   ++   ++ +   +
Sbjct: 557 YNSVYSEYQSKSGVNTNEELAALIQYQSSYGAAAKIVSTVDQMLDTLL 604


>gi|71736840|ref|YP_275566.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
          phaseolicola 1448A]
 gi|71557393|gb|AAZ36604.1| flagellar basal-body rod protein FlgB [Pseudomonas syringae pv.
          phaseolicola 1448A]
          Length = 135

 Score = 44.1 bits (102), Expect = 0.019,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 30/80 (37%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
            +  I   A     QR   +A+N+SN DT  F+   + FS V+ A  + +      +  
Sbjct: 6  DKALGIHEKALNFRAQRAEVLANNISNADTPNFKARDLDFSSVLAAQNDKVQNGHFALNK 65

Query: 62 GKEYLSKEVGSFISTGTELD 81
                +  G     GT + 
Sbjct: 66 TNSRHIEAEGMGNDDGTLMY 85


>gi|86151883|ref|ZP_01070096.1| flagellar hook-associated protein FlgK, putative [Campylobacter
          jejuni subsp. jejuni 260.94]
 gi|315124902|ref|YP_004066906.1| flagellar hook-associated protein FlgK, putative [Campylobacter
          jejuni subsp. jejuni ICDCCJ07001]
 gi|85840991|gb|EAQ58240.1| flagellar hook-associated protein FlgK, putative [Campylobacter
          jejuni subsp. jejuni 260.94]
 gi|315018624|gb|ADT66717.1| flagellar hook-associated protein FlgK, putative [Campylobacter
          jejuni subsp. jejuni ICDCCJ07001]
          Length = 608

 Score = 44.1 bits (102), Expect = 0.019,   Method: Composition-based stats.
 Identities = 11/78 (14%), Positives = 23/78 (29%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
             G+    A E +++T  +N+SN +   +   +V  +         +            
Sbjct: 7  LYTGVTGLKASEVQIATTGNNISNANATFYTRQRVVQTTNGYITTGGVQVGTGTAVESIV 66

Query: 65 YLSKEVGSFISTGTELDF 82
           L  E   +   G     
Sbjct: 67 RLHDEYSYYKLKGASTQL 84



 Score = 39.9 bits (91), Expect = 0.36,   Method: Composition-based stats.
 Identities = 5/48 (10%), Positives = 18/48 (37%)

Query: 191 GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
             +V   +   S  N+  E+  +I     + +   ++   ++ +   +
Sbjct: 557 YNSVYSEYQSKSGVNTNEELAALIQYQSSYGAAAKIVSTVDQMLDTLL 604


>gi|86149406|ref|ZP_01067637.1| flagellar hook-associated protein FlgK, putative [Campylobacter
          jejuni subsp. jejuni CF93-6]
 gi|88596766|ref|ZP_01100003.1| flagellar hook-associated protein FlgK, putative [Campylobacter
          jejuni subsp. jejuni 84-25]
 gi|218563069|ref|YP_002344848.1| flagellar hook-associated protein FlgK [Campylobacter jejuni
          subsp. jejuni NCTC 11168]
 gi|85840188|gb|EAQ57446.1| flagellar hook-associated protein FlgK, putative [Campylobacter
          jejuni subsp. jejuni CF93-6]
 gi|88191607|gb|EAQ95579.1| flagellar hook-associated protein FlgK, putative [Campylobacter
          jejuni subsp. jejuni 84-25]
 gi|112360775|emb|CAL35574.1| putative flagellar hook-associated protein [Campylobacter jejuni
          subsp. jejuni NCTC 11168]
 gi|284926674|gb|ADC29026.1| flagellar hook-associated protein FlgK [Campylobacter jejuni
          subsp. jejuni IA3902]
 gi|315927413|gb|EFV06751.1| flagellar hook-associated protein FlgK [Campylobacter jejuni
          subsp. jejuni DFVF1099]
 gi|315929004|gb|EFV08247.1| flagellar hook-associated protein FlgK [Campylobacter jejuni
          subsp. jejuni 305]
          Length = 608

 Score = 44.1 bits (102), Expect = 0.019,   Method: Composition-based stats.
 Identities = 11/78 (14%), Positives = 23/78 (29%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
             G+    A E +++T  +N+SN +   +   +V  +         +            
Sbjct: 7  LYTGVTGLKASEVQIATTGNNISNANATFYTRQRVVQTTNGYITTGGVQVGTGTAVESIV 66

Query: 65 YLSKEVGSFISTGTELDF 82
           L  E   +   G     
Sbjct: 67 RLHDEYSYYKLKGASTQL 84



 Score = 39.9 bits (91), Expect = 0.36,   Method: Composition-based stats.
 Identities = 5/48 (10%), Positives = 18/48 (37%)

Query: 191 GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
             +V   +   S  N+  E+  +I     + +   ++   ++ +   +
Sbjct: 557 YNSVYSEYQSKSGVNTNEELAALIQYQSSYGAAAKIVSTVDQMLDTLL 604


>gi|326319501|ref|YP_004237173.1| flagellar basal body rod protein [Acidovorax avenae subsp. avenae
          ATCC 19860]
 gi|323376337|gb|ADX48606.1| flagellar basal body rod protein [Acidovorax avenae subsp. avenae
          ATCC 19860]
          Length = 100

 Score = 43.7 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 19/39 (48%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK 49
             A + +L T A N++N +T GFR   V+ S V     
Sbjct: 11 GLRAAQLQLDTSAHNVANMNTEGFRRQTVEQSAVPDQGG 49


>gi|218133657|ref|ZP_03462461.1| hypothetical protein BACPEC_01526 [Bacteroides pectinophilus ATCC
          43243]
 gi|217991032|gb|EEC57038.1| hypothetical protein BACPEC_01526 [Bacteroides pectinophilus ATCC
          43243]
          Length = 131

 Score = 43.7 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 22/48 (45%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65
          R   + +N++N DT G++   V F + + +     +   S +    ++
Sbjct: 23 RNEVLTNNIANVDTPGYKRKDVSFEKYLNSALEAPENPYSTLNQRVKH 70


>gi|213024454|ref|ZP_03338901.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Typhi str. 404ty]
          Length = 403

 Score = 43.7 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 9/52 (17%), Positives = 23/52 (44%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+TV++N++N +  G+       ++    +    
Sbjct: 12 MSSLINHAMSGLNAAQAALNTVSNNINNYNVAGYTRQTTILAQANSTLGAGG 63


>gi|78776565|ref|YP_392880.1| flagellar basal body rod protein FlgC [Sulfurimonas denitrificans
           DSM 1251]
 gi|78497105|gb|ABB43645.1| Flagellar basal-body rod protein FlgC [Sulfurimonas denitrificans
           DSM 1251]
          Length = 164

 Score = 43.7 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 8/45 (17%), Positives = 20/45 (44%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           G++   N N + EM  ++  T+ + +     + ++     AI  +
Sbjct: 119 GYVAYPNINPVIEMADLVEATRSYQANVAAFESSKSIANSAISLL 163



 Score = 42.2 bits (97), Expect = 0.072,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 6/49 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44
            SF+I      A   R++T++ N++N  T     G  +R  +V F  +
Sbjct: 5  LNSFDISGYGLSAQRVRVNTISQNIANAQTTRTDEGGPYRRKEVVFKAI 53


>gi|30019789|ref|NP_831420.1| flagellar basal body rod protein FlgC [Bacillus cereus ATCC 14579]
 gi|29895334|gb|AAP08621.1| Flagellar basal-body rod protein flgC [Bacillus cereus ATCC 14579]
          Length = 137

 Score = 43.7 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 22/40 (55%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           G++   N +   EM  ++   + + + T++++ N+K + +
Sbjct: 91  GYVRYPNIDVTAEMTNVMVAQKMYEANTSVLNANKKMLDK 130



 Score = 41.8 bits (96), Expect = 0.083,   Method: Composition-based stats.
 Identities = 5/33 (15%), Positives = 13/33 (39%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG 33
          M  + N   +      + +   ++N+ N +T  
Sbjct: 1  MFQAINASGSGLTTARKWMQVTSNNIVNANTPA 33


>gi|296531769|ref|ZP_06894591.1| flagellar basal-body rod protein FlgC [Roseomonas cervicalis ATCC
          49957]
 gi|296267908|gb|EFH13713.1| flagellar basal-body rod protein FlgC [Roseomonas cervicalis ATCC
          49957]
          Length = 146

 Score = 43.7 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 7/81 (8%), Positives = 21/81 (25%), Gaps = 7/81 (8%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV-------GFRTIKVKFSEVVGAIKNDIDQK 55
           +     +       R+   A+N++N  +         +R   + F   V         +
Sbjct: 15 QAMATAASGMNTQATRMRVSAENIANASSTAAVPGGDAYRRKLITFDRAVDRATGAQLVR 74

Query: 56 ISFVASGKEYLSKEVGSFIST 76
          +  + +       +       
Sbjct: 75 MDSIRNDPRDFRTQYDPAHPA 95



 Score = 35.2 bits (79), Expect = 8.7,   Method: Composition-based stats.
 Identities = 13/130 (10%), Positives = 40/130 (30%)

Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRE 173
           + +A+                  +        G  + + K+I              VR +
Sbjct: 17  MATAASGMNTQATRMRVSAENIANASSTAAVPGGDAYRRKLITFDRAVDRATGAQLVRMD 76

Query: 174 NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           +    P    T  +       +RG+++  N +++ E   +    + + +   ++ +    
Sbjct: 77  SIRNDPRDFRTQYDPAHPAADERGYVKLPNVDTLVEQADLRAAGRSYEASMAVLQQARAL 136

Query: 234 MLEAIRNIAS 243
             + +  + S
Sbjct: 137 YGKTLDILRS 146


>gi|238764389|ref|ZP_04625339.1| Flagellar basal-body rod protein flgB [Yersinia kristensenii ATCC
          33638]
 gi|238697415|gb|EEP90182.1| Flagellar basal-body rod protein flgB [Yersinia kristensenii ATCC
          33638]
          Length = 137

 Score = 43.7 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 24/65 (36%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   ++ N++N DT GF+   + FS  +  +        + V+          
Sbjct: 15 ALNLRAQRQEILSSNIANADTPGFQARDIDFSSQLKKVMEQGRVNGTGVSLSLTSARHIP 74

Query: 71 GSFIS 75
           S + 
Sbjct: 75 ASTVQ 79


>gi|269792949|ref|YP_003317853.1| flagellar basal-body rod protein FlgB [Thermanaerovibrio
          acidaminovorans DSM 6589]
 gi|269100584|gb|ACZ19571.1| flagellar basal-body rod protein FlgB [Thermanaerovibrio
          acidaminovorans DSM 6589]
          Length = 134

 Score = 43.7 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 26/56 (46%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLS 67
             L +R+  VA N++N +T  +   +V F + + A+ +   +    V+  +   +
Sbjct: 14 LEGLSRRMGAVAQNVANANTPRYARREVSFEDQLAAVIDQPRRLPLAVSDQRHMTN 69


>gi|33592485|ref|NP_880129.1| flagellar hook-associated protein FlgK [Bordetella pertussis Tohama
           I]
 gi|33572131|emb|CAE41673.1| flagellar hook-associated protein 1 [Bordetella pertussis Tohama I]
 gi|332381902|gb|AEE66749.1| flagellar hook-associated protein FlgK [Bordetella pertussis CS]
          Length = 548

 Score = 43.7 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 23/179 (12%), Positives = 44/179 (24%), Gaps = 3/179 (1%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
              +N+ L    A +  L T + N++N  TVG+   +V  S                   
Sbjct: 1   MNLYNLALTGLNASQAGLETTSHNINNATTVGYSRQRVITSTAGAGETGQGFFGRGVQVD 60

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
                          G +   A        +     +   R         G   S +   
Sbjct: 61  TVTRQYDSFLYRQLVGAQGSSAQLSTHLAQVSQVNNLFGDRTVGITPALAGLFTSTNAAA 120

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEIS---QKGKVIATMGLYSVDMSQGFVRRENSGI 177
                 +V   +  K                 +   + T    +V+ +  ++ R N   
Sbjct: 121 TKPADPAVRADMIGKANSLVTQINTAYQELENQRNGLNTQISTTVEQANSYLERINDLN 179


>gi|316932791|ref|YP_004107773.1| flagellar hook-associated protein FlgK [Rhodopseudomonas palustris
           DX-1]
 gi|315600505|gb|ADU43040.1| flagellar hook-associated protein FlgK [Rhodopseudomonas palustris
           DX-1]
          Length = 623

 Score = 43.7 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 15/116 (12%), Positives = 38/116 (32%)

Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185
             +       K  + +       +  G   A          Q FV ++ S  +     + 
Sbjct: 508 GDTARPDFMIKQMMNSKYYYSAATGIGSDTAPFKGSLQSYLQQFVSQQGSNAAAAKQLSE 567

Query: 186 LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
            +++   T+++ F   S  N   EM  ++ L   + +   ++    +     ++ I
Sbjct: 568 GQNVVLNTLQQKFSASSGVNMDEEMAHLLSLQNAYAANARVMSTINQMYQSLMQAI 623



 Score = 38.3 bits (87), Expect = 0.86,   Method: Composition-based stats.
 Identities = 9/37 (24%), Positives = 19/37 (51%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
          + +I +A     +  +S V+ N++N +T G+    V 
Sbjct: 6  ALSIAMAGLRVNQASMSLVSSNVANAETPGYVRKTVN 42


>gi|220929471|ref|YP_002506380.1| flagellar basal-body rod protein FlgB [Clostridium cellulolyticum
          H10]
 gi|219999799|gb|ACL76400.1| flagellar basal-body rod protein FlgB [Clostridium cellulolyticum
          H10]
          Length = 137

 Score = 43.7 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 11/83 (13%), Positives = 28/83 (33%), Gaps = 5/83 (6%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV-----GAIKNDIDQKISFVASGKEY 65
          +  A   R   ++ N++N DT  ++   V F + +           I      +    + 
Sbjct: 15 SISASWTRNEVISQNLANIDTPNYKRKDVTFEQYLNDSLDSRKLEGITTDERHIPIKSKN 74

Query: 66 LSKEVGSFISTGTELDFALEGDA 88
          + K         ++    ++G+ 
Sbjct: 75 IEKVKPEITLDNSDTSMRIDGNN 97


>gi|77165841|ref|YP_344366.1| flagellar basal-body rod protein FlgB [Nitrosococcus oceani ATCC
           19707]
 gi|76884155|gb|ABA58836.1| Flagellar basal-body rod protein FlgB [Nitrosococcus oceani ATCC
           19707]
          Length = 131

 Score = 43.7 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 10/94 (10%), Positives = 29/94 (30%)

Query: 16  EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIS 75
            +R   +A N++N DT G++   + F   +   +       +  A    +   +     +
Sbjct: 20  SRRAEVLAANLANGDTPGYKARDIDFKAALQQAQGQGLPLQATHAGHVSHSLGQFPGGEA 79

Query: 76  TGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109
                  A         +      +    +++ +
Sbjct: 80  LYRIPQQASLDGNTVDSQVEHSEFMQNALQYQAS 113


>gi|260220025|emb|CBA27150.1| hypothetical protein Csp_A00840 [Curvibacter putative symbiont of
          Hydra magnipapillata]
          Length = 99

 Score = 43.7 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 20/40 (50%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
          M +  +I L+   A +  L+  A N++N  T GF+  +  
Sbjct: 1  MNSISSIALSGLNAAQTSLNASAHNVANLATEGFKRQETV 40


>gi|317153838|ref|YP_004121886.1| flagellar hook-associated protein FlgK [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316944089|gb|ADU63140.1| flagellar hook-associated protein FlgK [Desulfovibrio aespoeensis
           Aspo-2]
          Length = 711

 Score = 43.7 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 6/36 (16%), Positives = 13/36 (36%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            N   EM  +I     + +   LI   ++ +   + 
Sbjct: 673 VNLDEEMSNLIRYQASYTAAAKLITTADQMLQTILS 708



 Score = 39.5 bits (90), Expect = 0.39,   Method: Composition-based stats.
 Identities = 9/73 (12%), Positives = 23/73 (31%), Gaps = 2/73 (2%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG--AIKNDIDQKISFVASGKEYLSK 68
          A  A + +L    +N++N +T G+        E          +   +      + +   
Sbjct: 15 ALFASQVQLQVTGENIANVNTEGYSRRSAILEEGPYIDYSPGQLGTGVKAKEVVRNFDEM 74

Query: 69 EVGSFISTGTELD 81
              ++   +  D
Sbjct: 75 VESMYVGQASMRD 87


>gi|268317787|ref|YP_003291506.1| flagellar hook-associated protein FlgK [Rhodothermus marinus DSM
           4252]
 gi|262335321|gb|ACY49118.1| flagellar hook-associated protein FlgK [Rhodothermus marinus DSM
           4252]
          Length = 464

 Score = 43.7 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 6/36 (16%), Positives = 13/36 (36%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +   E+  MI   Q + +   ++D     M   + 
Sbjct: 428 VSLDEELTNMIRFQQAYAATARVLDTARSMMDTLLN 463



 Score = 36.8 bits (83), Expect = 2.8,   Method: Composition-based stats.
 Identities = 8/29 (27%), Positives = 16/29 (55%)

Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEV 44
          +  ++TV  N++N +T G+   +V    V
Sbjct: 18 QAAMNTVGQNVANANTEGYARRRVTLQAV 46


>gi|224534079|ref|ZP_03674662.1| flagellar hook-associated protein 1 [Borrelia burgdorferi CA-11.2a]
 gi|224512778|gb|EEF83146.1| flagellar hook-associated protein 1 [Borrelia burgdorferi CA-11.2a]
          Length = 151

 Score = 43.7 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 16/41 (39%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E+  MI   Q F + +  I  + + +   I  + 
Sbjct: 110 SGVNKDEELANMIEFQQAFIAASKFITVSVELIDTVINKMG 150


>gi|307945687|ref|ZP_07661023.1| flagellar hook-associated protein FlgK [Roseibium sp. TrichSKD4]
 gi|307771560|gb|EFO30785.1| flagellar hook-associated protein FlgK [Roseibium sp. TrichSKD4]
          Length = 617

 Score = 43.7 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 22/48 (45%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50
          ++ N  L      +++L   + N++N DTVG+   +V+ +        
Sbjct: 5  SALNNALFGVTFNQRQLDVTSQNIANKDTVGYTKKQVEANVFYDGNGG 52



 Score = 37.5 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 4/35 (11%), Positives = 14/35 (40%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            +   EM Q+++L   + +   ++    +     +
Sbjct: 580 VDLDEEMAQLVNLQNAYAANARVMQAVNELFDRLL 614


>gi|168333624|ref|ZP_02691884.1| flagellar hook-associated protein FlgK [Epulopiscium sp. 'N.t.
           morphotype B']
          Length = 544

 Score = 43.7 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 16/176 (9%), Positives = 42/176 (23%), Gaps = 6/176 (3%)

Query: 73  FISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQ 132
           +    T    A     +   +       T     +   +           + D    P  
Sbjct: 369 YRDEDTSAIIASNDPNFDYNKMTAENFSTSLEIIESDKNIRTNYEHRMDVINDPKLDPPY 428

Query: 133 IPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV 192
             +     N G    +           ++S      ++    S +  N     +   +  
Sbjct: 429 NSEIYYNPNPGNNDLLLDLMDQQNNQDVFSQGTPTDYMISIFSAMGVNASEAQMYAKTQS 488

Query: 193 TVKRGFLED-----SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
            +    +E+     S  ++  E   +I     +     ++   +      I  + S
Sbjct: 489 NIISE-IENQRMAVSGVDNNEEFMNLIKYNMAYQISAKVMSTLDNIYDITINRMGS 543



 Score = 43.7 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 20/39 (51%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
            + ++   A +Q LS  + N++N +T G+   ++K   
Sbjct: 6  ITVAMSGLFAAQQGLSVTSSNINNINTPGYSRQEIKQEA 44


>gi|46578732|ref|YP_009540.1| flagellar basal body rod protein FlgB [Desulfovibrio vulgaris
          str. Hildenborough]
 gi|46448144|gb|AAS94799.1| flagellar basal-body rod protein FlgB [Desulfovibrio vulgaris
          str. Hildenborough]
 gi|311232604|gb|ADP85458.1| flagellar basal-body rod protein FlgB [Desulfovibrio vulgaris
          RCH1]
          Length = 136

 Score = 43.7 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 19/39 (48%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50
               QR + V  N++N  T G++  +++F + + +   
Sbjct: 16 MDMQLQRQNVVMSNIANVRTPGYKPRELEFEKELQSALG 54


>gi|315281376|ref|ZP_07870013.1| flagellar basal-body rod protein FlgC [Listeria marthii FSL S4-120]
 gi|313614973|gb|EFR88480.1| flagellar basal-body rod protein FlgC [Listeria marthii FSL S4-120]
          Length = 136

 Score = 43.7 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 21/40 (52%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           G++  +N +   EM  ++   + + + T+ +  NEK M +
Sbjct: 90  GYVNYANVDMTAEMTNLMVGQKMYAANTSALQANEKMMEK 129



 Score = 38.7 bits (88), Expect = 0.71,   Method: Composition-based stats.
 Identities = 8/30 (26%), Positives = 15/30 (50%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTD 30
          M    N   +A  A +Q +   ++N++N D
Sbjct: 1  MFEGINTSGSALNAAKQWMEVSSNNIANAD 30


>gi|241761153|ref|ZP_04759242.1| flagellar basal-body rod protein FlgC [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|241374772|gb|EER64233.1| flagellar basal-body rod protein FlgC [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
          Length = 134

 Score = 43.7 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 5/35 (14%), Positives = 16/35 (45%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            ++  EM +MI   + + +   ++   +   L+ +
Sbjct: 96  VDTAQEMVEMIETARDYQNNVQVMQTAKSLTLDTL 130


>gi|237757071|ref|ZP_04585515.1| flagellar hook-associated protein FlgK [Sulfurihydrogenibium
           yellowstonense SS-5]
 gi|237690770|gb|EEP59934.1| flagellar hook-associated protein FlgK [Sulfurihydrogenibium
           yellowstonense SS-5]
          Length = 475

 Score = 43.7 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 5/36 (13%), Positives = 14/36 (38%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            N   E+  +  L + + +   +I   ++ M   + 
Sbjct: 437 VNMDEELINLTKLQRSYQAAARIITVTDELMQTILN 472


>gi|23013291|ref|ZP_00053203.1| COG4786: Flagellar basal body rod protein [Magnetospirillum
           magnetotacticum MS-1]
          Length = 58

 Score = 43.7 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 22/54 (40%)

Query: 189 LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            +   ++ G LE SN N   E+ Q+  +   + +    I      M  AI  +A
Sbjct: 1   GARERLEVGSLERSNVNPFTELRQVSEVAGAYQTAAARITALHDLMRTAISRLA 54


>gi|91785637|ref|YP_560843.1| flagellar basal body rod protein FlgB [Burkholderia xenovorans
          LB400]
 gi|91689591|gb|ABE32791.1| Flagellar basal-body rod protein FlgB [Burkholderia xenovorans
          LB400]
          Length = 164

 Score = 43.7 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 26/70 (37%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A      R   ++ N++N DT G++   V F+  +              AS    L+   
Sbjct: 15 ALDVRAYRQELLSSNIANADTPGYKARDVDFASSLAGALKKAGGSAGTAASNSSTLAMTQ 74

Query: 71 GSFISTGTEL 80
           + ++ G  +
Sbjct: 75 PAGVTGGMSM 84


>gi|75761144|ref|ZP_00741136.1| Flagellar basal-body rod protein flgC [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
 gi|206970905|ref|ZP_03231857.1| flagellar basal-body rod protein FlgC [Bacillus cereus AH1134]
 gi|218896677|ref|YP_002445088.1| flagellar basal-body rod protein FlgC [Bacillus cereus G9842]
 gi|228900326|ref|ZP_04064556.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis IBL
           4222]
 gi|228920455|ref|ZP_04083800.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|228952124|ref|ZP_04114219.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|228958024|ref|ZP_04119760.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|229069296|ref|ZP_04202586.1| Flagellar basal-body rod protein FlgC [Bacillus cereus F65185]
 gi|229078926|ref|ZP_04211478.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock4-2]
 gi|229109201|ref|ZP_04238800.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock1-15]
 gi|229127070|ref|ZP_04256069.1| Flagellar basal-body rod protein FlgC [Bacillus cereus BDRD-Cer4]
 gi|229149946|ref|ZP_04278174.1| Flagellar basal-body rod protein FlgC [Bacillus cereus m1550]
 gi|229178153|ref|ZP_04305524.1| Flagellar basal-body rod protein FlgC [Bacillus cereus 172560W]
 gi|229189841|ref|ZP_04316852.1| Flagellar basal-body rod protein FlgC [Bacillus cereus ATCC 10876]
 gi|74491372|gb|EAO54596.1| Flagellar basal-body rod protein flgC [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
 gi|206734541|gb|EDZ51711.1| flagellar basal-body rod protein FlgC [Bacillus cereus AH1134]
 gi|218541427|gb|ACK93821.1| flagellar basal-body rod protein FlgC [Bacillus cereus G9842]
 gi|228593649|gb|EEK51457.1| Flagellar basal-body rod protein FlgC [Bacillus cereus ATCC 10876]
 gi|228605283|gb|EEK62733.1| Flagellar basal-body rod protein FlgC [Bacillus cereus 172560W]
 gi|228633627|gb|EEK90228.1| Flagellar basal-body rod protein FlgC [Bacillus cereus m1550]
 gi|228656423|gb|EEL12262.1| Flagellar basal-body rod protein FlgC [Bacillus cereus BDRD-Cer4]
 gi|228674211|gb|EEL29456.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock1-15]
 gi|228704340|gb|EEL56774.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock4-2]
 gi|228713783|gb|EEL65668.1| Flagellar basal-body rod protein FlgC [Bacillus cereus F65185]
 gi|228801649|gb|EEM48530.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|228807656|gb|EEM54180.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|228839085|gb|EEM84381.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|228859361|gb|EEN03791.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis IBL
           4222]
          Length = 137

 Score = 43.7 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 22/40 (55%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           G++   N +   EM  ++   + + + T++++ N+K + +
Sbjct: 91  GYVRYPNIDVTAEMTNVMVAQKMYEANTSVLNANKKMLDK 130



 Score = 42.2 bits (97), Expect = 0.057,   Method: Composition-based stats.
 Identities = 5/33 (15%), Positives = 13/33 (39%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG 33
          M  + N   +      + +   ++N+ N +T  
Sbjct: 1  MFQAINASGSGLTTARKWMEVTSNNIVNANTTA 33


>gi|22127330|ref|NP_670753.1| flagellar basal body rod protein FlgC [Yersinia pestis KIM 10]
 gi|45442794|ref|NP_994333.1| flagellar basal body rod protein FlgC [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51597639|ref|YP_071830.1| flagellar basal body rod protein FlgC [Yersinia pseudotuberculosis
           IP 32953]
 gi|108809057|ref|YP_652973.1| flagellar basal body rod protein FlgC [Yersinia pestis Antiqua]
 gi|108810746|ref|YP_646513.1| flagellar basal body rod protein FlgC [Yersinia pestis Nepal516]
 gi|145597815|ref|YP_001161891.1| flagellar basal body rod protein FlgC [Yersinia pestis Pestoides F]
 gi|150260251|ref|ZP_01916979.1| lateral flagellar rod protein [Yersinia pestis CA88-4125]
 gi|162418952|ref|YP_001604849.1| flagellar basal body rod protein FlgC [Yersinia pestis Angola]
 gi|165924966|ref|ZP_02220798.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165939065|ref|ZP_02227617.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166008997|ref|ZP_02229895.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166212219|ref|ZP_02238254.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167398642|ref|ZP_02304166.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167418994|ref|ZP_02310747.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167425145|ref|ZP_02316898.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167466343|ref|ZP_02331047.1| flagellar basal-body rod protein FlgC [Yersinia pestis FV-1]
 gi|170022969|ref|YP_001719474.1| flagellar basal body rod protein FlgC [Yersinia pseudotuberculosis
           YPIII]
 gi|186896773|ref|YP_001873885.1| flagellar basal body rod protein FlgC [Yersinia pseudotuberculosis
           PB1/+]
 gi|218927910|ref|YP_002345785.1| flagellar basal body rod protein FlgC [Yersinia pestis CO92]
 gi|229837406|ref|ZP_04457569.1| Flagellar basal-body rod protein flgC [Yersinia pestis Pestoides A]
 gi|229840619|ref|ZP_04460778.1| Flagellar basal-body rod protein flgC [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229842830|ref|ZP_04462982.1| Flagellar basal-body rod protein flgC [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229900943|ref|ZP_04516067.1| Flagellar basal-body rod protein flgC [Yersinia pestis Nepal516]
 gi|270487675|ref|ZP_06204749.1| flagellar basal-body rod protein FlgC [Yersinia pestis KIM D27]
 gi|294502786|ref|YP_003566848.1| flagellar basal body rod protein [Yersinia pestis Z176003]
 gi|21960411|gb|AAM87004.1|AE013948_12 flagellar biosynthesis protein, cell-proximal portion of basal-body
           rod [Yersinia pestis KIM 10]
 gi|45437660|gb|AAS63210.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51590921|emb|CAH22577.1| Putative flagellar basal-body rod protein [Yersinia
           pseudotuberculosis IP 32953]
 gi|108774394|gb|ABG16913.1| flagellar basal-body rod protein [Yersinia pestis Nepal516]
 gi|108780970|gb|ABG15028.1| putative flagellar basal-body rod protein [Yersinia pestis Antiqua]
 gi|115346521|emb|CAL19397.1| putative flagellar basal-body rod protein [Yersinia pestis CO92]
 gi|145209511|gb|ABP38918.1| flagellar basal-body rod protein [Yersinia pestis Pestoides F]
 gi|149289659|gb|EDM39736.1| lateral flagellar rod protein [Yersinia pestis CA88-4125]
 gi|162351767|gb|ABX85715.1| flagellar basal-body rod protein FlgC [Yersinia pestis Angola]
 gi|165913021|gb|EDR31646.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165923166|gb|EDR40317.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165992336|gb|EDR44637.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166206965|gb|EDR51445.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|166962988|gb|EDR59009.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167051146|gb|EDR62554.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167055908|gb|EDR65689.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|169749503|gb|ACA67021.1| flagellar basal-body rod protein FlgC [Yersinia pseudotuberculosis
           YPIII]
 gi|186699799|gb|ACC90428.1| flagellar basal-body rod protein FlgC [Yersinia pseudotuberculosis
           PB1/+]
 gi|229682282|gb|EEO78374.1| Flagellar basal-body rod protein flgC [Yersinia pestis Nepal516]
 gi|229690097|gb|EEO82154.1| Flagellar basal-body rod protein flgC [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229696985|gb|EEO87032.1| Flagellar basal-body rod protein flgC [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229705529|gb|EEO91539.1| Flagellar basal-body rod protein flgC [Yersinia pestis Pestoides A]
 gi|262360818|gb|ACY57539.1| flagellar basal body rod protein [Yersinia pestis D106004]
 gi|270336179|gb|EFA46956.1| flagellar basal-body rod protein FlgC [Yersinia pestis KIM D27]
 gi|294353245|gb|ADE63586.1| flagellar basal body rod protein [Yersinia pestis Z176003]
 gi|320016713|gb|ADW00285.1| Flagellar basal-body rod protein flgC [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 141

 Score = 43.7 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 24/47 (51%), Gaps = 1/47 (2%)

Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           +G++     N + EM  M+  ++ F +   +++   KSM +++  + 
Sbjct: 94  QGYVFYPAVNVVSEMADMMSASRSFETNVEVLNSV-KSMQQSVLKLG 139



 Score = 38.7 bits (88), Expect = 0.67,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 30/91 (32%), Gaps = 6/91 (6%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKISFVA 60
          +  +A  A   RL+T+A N++N ++        ++     FS V  A      + +    
Sbjct: 9  VAGSAMTAQTIRLNTIASNLANAESPAASAATVYKARSPVFSAVYSARTAADPRGVQSAQ 68

Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFA 91
               + +  GS          A      F 
Sbjct: 69 VQVLDVVEVGGSVQRYEPNHPMANPQGYVFY 99


>gi|207108977|ref|ZP_03243139.1| flagellar hook protein FlgE [Helicobacter pylori HPKX_438_CA4C1]
          Length = 40

 Score = 43.7 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 6/40 (15%), Positives = 21/40 (52%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
          M  +     +     +  + ++++N++N +T+G+R+   +
Sbjct: 1  MNDTLLNAYSGIKTHQFGIDSLSNNIANVNTLGYRSNDPE 40


>gi|170694389|ref|ZP_02885543.1| flagellar basal-body rod protein FlgB [Burkholderia graminis
          C4D1M]
 gi|170140812|gb|EDT08986.1| flagellar basal-body rod protein FlgB [Burkholderia graminis
          C4D1M]
          Length = 163

 Score = 43.7 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 11/73 (15%), Positives = 23/73 (31%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A      R   ++ N++N DT G++   V F+  +              ++       + 
Sbjct: 15 ALDVRAYRQELLSSNIANADTPGYKARDVDFASSLAGALKKTGAAGHTASNTATLPLAQP 74

Query: 71 GSFISTGTELDFA 83
              S  +    A
Sbjct: 75 AGVTSGMSMAATA 87


>gi|120613370|ref|YP_973048.1| flagellar basal body rod protein [Acidovorax citrulli AAC00-1]
 gi|120591834|gb|ABM35274.1| flagellar basal body rod protein [Acidovorax citrulli AAC00-1]
          Length = 100

 Score = 43.7 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 19/39 (48%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK 49
             A + +L T A N++N +T GFR   V+ S V     
Sbjct: 11 GLRAAQLQLDTSAHNVANMNTEGFRRQTVEQSAVPDQGG 49


>gi|253575863|ref|ZP_04853197.1| flagellar hook-associated protein FlgK [Paenibacillus sp. oral
           taxon 786 str. D14]
 gi|251844657|gb|EES72671.1| flagellar hook-associated protein FlgK [Paenibacillus sp. oral
           taxon 786 str. D14]
          Length = 523

 Score = 43.7 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 17/41 (41%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  +   E+  MI   Q +N+    +   ++ +   I ++ 
Sbjct: 479 SGVSMDEELADMIRFQQAYNAAARNMTVVDEMLDRVINSMG 519



 Score = 37.2 bits (84), Expect = 2.0,   Method: Composition-based stats.
 Identities = 15/114 (13%), Positives = 31/114 (27%), Gaps = 1/114 (0%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
                  A       + T+  N++N +T G+   +V  +E        + +       G 
Sbjct: 7   GIETSKRALFVNTVSMQTLGHNIANANTEGYTRQRVNLTEANPIWAMGMTKSAQPGQLGT 66

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSA 117
                 +     T  +  F    +            +T          G+ +SA
Sbjct: 67  GVEYTSITRVRDTFLDTQFR-RENQMLGSWEVLNSSMTAIQNIINEPSGNGLSA 119


>gi|237751406|ref|ZP_04581886.1| flagellar hook-associated protein FlgK [Helicobacter bilis ATCC
           43879]
 gi|229372772|gb|EEO23163.1| flagellar hook-associated protein FlgK [Helicobacter bilis ATCC
           43879]
          Length = 606

 Score = 43.7 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 14/37 (37%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  +   EM  +I     + +   +I   ++ +   +
Sbjct: 566 SQVSVDEEMVNLIKFQGGYAANAKVITTIDRMIETLL 602



 Score = 41.8 bits (96), Expect = 0.075,   Method: Composition-based stats.
 Identities = 4/29 (13%), Positives = 11/29 (37%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTD 30
           +S +       A +  +    +N++N  
Sbjct: 5  LSSLHTSTTGLHAHQLMVDVTGNNIANAS 33


>gi|228907377|ref|ZP_04071235.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis IBL
           200]
 gi|228852238|gb|EEM97034.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis IBL
           200]
          Length = 137

 Score = 43.7 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 22/40 (55%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           G++   N +   EM  ++   + + + T++++ N+K + +
Sbjct: 91  GYVRYPNIDVTAEMTNVMVAQKMYEANTSVLNANKKMLDK 130



 Score = 42.2 bits (97), Expect = 0.058,   Method: Composition-based stats.
 Identities = 5/33 (15%), Positives = 13/33 (39%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG 33
          M  + N   +      + +   ++N+ N +T  
Sbjct: 1  MFQAINASGSGLTTARKWMEVTSNNIVNANTTA 33


>gi|161614593|ref|YP_001588558.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Paratyphi B str. SPB7]
 gi|161363957|gb|ABX67725.1| hypothetical protein SPAB_02343 [Salmonella enterica subsp.
          enterica serovar Paratyphi B str. SPB7]
          Length = 553

 Score = 43.7 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 9/52 (17%), Positives = 23/52 (44%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+TV++N++N +  G+       ++    +    
Sbjct: 1  MSSLINHAMSGLNAAQAALNTVSNNINNYNVAGYTRQTTILAQANSTLGAGG 52


>gi|168699687|ref|ZP_02731964.1| probable flagellar hook-associated protein [Gemmata obscuriglobus
          UQM 2246]
          Length = 562

 Score = 43.7 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 20/40 (50%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
          M  S+ IG +A    ++ L  +  N++N  T G+  +  +
Sbjct: 1  MTNSYAIGTSAIATAQKALDLIGQNVANATTPGYHRVDPQ 40


>gi|83814873|ref|YP_446719.1| flagella basal body rod protein [Salinibacter ruber DSM 13855]
 gi|83756267|gb|ABC44380.1| Flagella basal body rod protein [Salinibacter ruber DSM 13855]
          Length = 137

 Score = 43.7 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 24/71 (33%)

Query: 10  AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69
            A  A  QR    + N++N DT G+  + V F E +  ++              +   ++
Sbjct: 36  NAMSAYAQRRRAASSNLANIDTPGYDRMSVSFEEELQDVRRHSGSLREQSEVEPDTEVED 95

Query: 70  VGSFISTGTEL 80
               +      
Sbjct: 96  EAPVLEEELMT 106


>gi|162147439|ref|YP_001601900.1| flagellar basal body rod protein FlgC [Gluconacetobacter
          diazotrophicus PAl 5]
 gi|161786016|emb|CAP55598.1| putative flagellar basal-body rod protein flgC [Gluconacetobacter
          diazotrophicus PAl 5]
          Length = 135

 Score = 43.7 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 25/77 (32%), Gaps = 7/77 (9%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQKISFV 59
          +  A   A E+RL   A+N++N DT G       +R   + F   +         K+  +
Sbjct: 9  VSAAGMRAQEERLRVAAENLANKDTTGSTRGADPYRRKTITFQATLDQASGVSSVKVKGI 68

Query: 60 ASGKEYLSKEVGSFIST 76
                   +       
Sbjct: 69 GQDNTPFQTKYDPSHPA 85



 Score = 37.5 bits (85), Expect = 1.5,   Method: Composition-based stats.
 Identities = 8/45 (17%), Positives = 16/45 (35%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           G+++  N NSM E+         + +    +  +       I  I
Sbjct: 90  GYVKMPNVNSMVEIMDTHEAQHSYEANLNTMQISRSMATRTINLI 134


>gi|226314925|ref|YP_002774821.1| flagellar hook-associated protein 1 [Brevibacillus brevis NBRC
           100599]
 gi|226097875|dbj|BAH46317.1| flagellar hook-associated protein 1 [Brevibacillus brevis NBRC
           100599]
          Length = 495

 Score = 43.7 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 5/41 (12%), Positives = 18/41 (43%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  +   EM +M+     +++   ++   ++ + + I  + 
Sbjct: 451 SGVSIDDEMAEMVKYQHAYSASARVMTSMDEILDKVINGMG 491



 Score = 42.2 bits (97), Expect = 0.067,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 16/40 (40%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
             +      A +  L+T   N+SN +T G+   +V    
Sbjct: 7  GIEVSKRGLFAQQSALNTTGHNISNANTEGYSRQRVNMQA 46


>gi|194468525|ref|ZP_03074509.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Kentucky str. CVM29188]
 gi|194454889|gb|EDX43728.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Kentucky str. CVM29188]
          Length = 553

 Score = 43.7 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 9/52 (17%), Positives = 23/52 (44%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+TV++N++N +  G+       ++    +    
Sbjct: 1  MSSLINHAMSGLNAAQAALNTVSNNINNYNVAGYTRQTTILAQANSTLGAGG 52


>gi|15612112|ref|NP_223764.1| flagellar hook-associated protein FlgK [Helicobacter pylori J99]
 gi|4155652|gb|AAD06640.1| FLAGELLAR HOOK-ASSOCIATED PROTEIN 1 (HAP1) [Helicobacter pylori
           J99]
          Length = 606

 Score = 43.7 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 18/52 (34%), Gaps = 8/52 (15%)

Query: 195 KRGFLED--------SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           K+  LE         S  +   EM  +I     + +   +I   ++ +   +
Sbjct: 551 KQSMLETIKKEQLSISQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLL 602



 Score = 38.7 bits (88), Expect = 0.69,   Method: Composition-based stats.
 Identities = 6/29 (20%), Positives = 11/29 (37%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTD 30
           +S N       A +  +    +N+SN  
Sbjct: 5  LSSLNTSYTGLQAHQSMVDVTGNNISNAS 33


>gi|317014505|gb|ADU81941.1| flagellar hook-associated protein FlgK [Helicobacter pylori
           Gambia94/24]
          Length = 606

 Score = 43.7 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 18/52 (34%), Gaps = 8/52 (15%)

Query: 195 KRGFLED--------SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           K+  LE         S  +   EM  +I     + +   +I   ++ +   +
Sbjct: 551 KQSMLETIKKEQLSISQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLL 602



 Score = 38.7 bits (88), Expect = 0.69,   Method: Composition-based stats.
 Identities = 6/29 (20%), Positives = 11/29 (37%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTD 30
           +S N       A +  +    +N+SN  
Sbjct: 5  LSSLNTSYTGLQAHQSMVDVTGNNISNAS 33


>gi|296534151|ref|ZP_06896647.1| probable flagellar basal-body rod protein FlgB [Roseomonas
          cervicalis ATCC 49957]
 gi|296265527|gb|EFH11656.1| probable flagellar basal-body rod protein FlgB [Roseomonas
          cervicalis ATCC 49957]
          Length = 129

 Score = 43.7 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 25/76 (32%), Gaps = 3/76 (3%)

Query: 8  GLAAQLA--LEQRLSTVADNMSNTDTVGFR-TIKVKFSEVVGAIKNDIDQKISFVASGKE 64
           LA Q    LEQR   +A N++N +T GF+      F +V+     +     +       
Sbjct: 10 ALAGQRLNWLEQRQKVLAQNIANANTPGFQPRDLQAFEQVLERAGANAPLARTDARHIPA 69

Query: 65 YLSKEVGSFISTGTEL 80
              +           
Sbjct: 70 RNEMQGRPDRKVSERS 85


>gi|149911705|ref|ZP_01900313.1| flagellar basal body protein [Moritella sp. PE36]
 gi|149805235|gb|EDM65252.1| flagellar basal body protein [Moritella sp. PE36]
          Length = 131

 Score = 43.7 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 19/38 (50%)

Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
          E+R   +A N++N DT GF+   + F + + +      
Sbjct: 20 ERRAEVLASNIANADTPGFKARDLSFKDALASATQGSS 57


>gi|153949008|ref|YP_001399632.1| flagellar basal body rod protein FlgC [Yersinia pseudotuberculosis
           IP 31758]
 gi|152960503|gb|ABS47964.1| flagellar basal-body rod protein FlgC [Yersinia pseudotuberculosis
           IP 31758]
          Length = 141

 Score = 43.7 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 24/47 (51%), Gaps = 1/47 (2%)

Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           +G++     N + EM  M+  ++ F +   +++   KSM +++  + 
Sbjct: 94  QGYVFYPAVNVVSEMADMMSASRSFETNVEVLNSV-KSMQQSVLKLG 139



 Score = 39.9 bits (91), Expect = 0.33,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 30/91 (32%), Gaps = 6/91 (6%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKISFVA 60
          +  +A  A   RL+T+A N++N ++        ++     FS V  A      Q I    
Sbjct: 9  VAGSAMTAQTIRLNTIASNLANAESPAASAATVYKARSPVFSAVYSARAETEPQGIQSAQ 68

Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFA 91
               + +  GS          A      F 
Sbjct: 69 VQVLDVVEVGGSVQRYEPNHPMANPQGYVFY 99


>gi|330502731|ref|YP_004379600.1| flagellar basal body rod protein FlgB [Pseudomonas mendocina
          NK-01]
 gi|328917017|gb|AEB57848.1| flagellar basal body rod protein FlgB [Pseudomonas mendocina
          NK-01]
          Length = 135

 Score = 43.7 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 9/60 (15%), Positives = 23/60 (38%)

Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76
          QR   +++N++N DT  ++   + F+ V+    + + +    +           G     
Sbjct: 21 QRAEVLSNNIANADTPNYKARDLDFASVLAEQNSRMQRGGVALNRTDSRHIPADGVNSGE 80


>gi|310767296|gb|ADP12246.1| flagellar hook-associated protein FlgK [Erwinia sp. Ejp617]
          Length = 551

 Score = 43.7 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 8/51 (15%), Positives = 19/51 (37%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51
          M    N  ++   A    L+T ++N++N    G+       ++    +   
Sbjct: 1  MSNLINTAMSGLSASSAALNTTSNNITNYAVTGYSRQTTVLNQSASTLSGG 51


>gi|157147104|ref|YP_001454423.1| flagellar basal body rod protein FlgC [Citrobacter koseri ATCC
           BAA-895]
 gi|157084309|gb|ABV13987.1| hypothetical protein CKO_02881 [Citrobacter koseri ATCC BAA-895]
          Length = 141

 Score = 43.7 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 20/43 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   + N + EM  M+  ++ F +   +++  +      +R
Sbjct: 95  GYVYYPDVNVVEEMADMMSASRGFETNVDVLNSVKSMQQSLLR 137



 Score = 38.3 bits (87), Expect = 0.99,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 22/45 (48%), Gaps = 6/45 (13%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVV 45
          +  +A  A   RL+T+A N++N +T        ++  +  F+ V 
Sbjct: 9  VSGSAMTAQTVRLNTIASNLANAETASATEDGVYKARRPVFAAVY 53


>gi|229043498|ref|ZP_04191208.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH676]
 gi|229144356|ref|ZP_04272762.1| Flagellar basal-body rod protein FlgC [Bacillus cereus BDRD-ST24]
 gi|296502344|ref|YP_003664044.1| flagellar basal body rod protein FlgC [Bacillus thuringiensis
           BMB171]
 gi|228639143|gb|EEK95567.1| Flagellar basal-body rod protein FlgC [Bacillus cereus BDRD-ST24]
 gi|228725876|gb|EEL77123.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH676]
 gi|296323396|gb|ADH06324.1| flagellar basal body rod protein FlgC [Bacillus thuringiensis
           BMB171]
          Length = 137

 Score = 43.7 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 22/40 (55%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           G++   N +   EM  ++   + + + T++++ N+K + +
Sbjct: 91  GYVRYPNIDVTAEMTNVMVAQKMYEANTSVLNANKKMLDK 130



 Score = 42.2 bits (97), Expect = 0.058,   Method: Composition-based stats.
 Identities = 5/33 (15%), Positives = 13/33 (39%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG 33
          M  + N   +      + +   ++N+ N +T  
Sbjct: 1  MFQAINASGSGLTTARKWMEVTSNNIVNANTTA 33


>gi|66046710|ref|YP_236551.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
          syringae B728a]
 gi|63257417|gb|AAY38513.1| Flagellar basal-body rod protein FlgB [Pseudomonas syringae pv.
          syringae B728a]
 gi|320329349|gb|EFW85342.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
          glycinea str. race 4]
 gi|330880519|gb|EGH14668.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
          glycinea str. race 4]
 gi|330889088|gb|EGH21749.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
          mori str. 301020]
 gi|330953718|gb|EGH53978.1| flagellar basal body rod protein FlgB [Pseudomonas syringae Cit
          7]
 gi|330972410|gb|EGH72476.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
          aceris str. M302273PT]
 gi|330986465|gb|EGH84568.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
          lachrymans str. M301315]
          Length = 135

 Score = 43.7 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 30/80 (37%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
            +  I   A     QR   +A+N+SN DT  F+   + FS V+ A  + +      +  
Sbjct: 6  DKALGIHEKALNFRAQRAEVLANNISNADTPNFKARDLDFSSVLAAENDKVQNGHFALNK 65

Query: 62 GKEYLSKEVGSFISTGTELD 81
                +  G     GT + 
Sbjct: 66 TNSRHIEAEGMGNDDGTLMY 85


>gi|316936688|gb|ADU60340.1| FlgB [Salmonella enterica subsp. enterica serovar Typhimurium]
          Length = 87

 Score = 43.7 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 26/66 (39%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   +A N++N DT G++   + F+  +  +     ++   VA          
Sbjct: 9  ALNLRAQRQEILAANIANADTPGYQARDIDFASELKKVMVRGREETGGVALTLTSSHHIP 68

Query: 71 GSFIST 76
             +S+
Sbjct: 69 AQAVSS 74


>gi|313624695|gb|EFR94652.1| flagellar basal-body rod protein FlgC [Listeria innocua FSL J1-023]
          Length = 136

 Score = 43.7 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 21/40 (52%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           G++  +N +   EM  ++   + + + T+ +  NEK M +
Sbjct: 90  GYVNYANVDMTAEMTNLMVGQKMYAANTSALQANEKMMEK 129



 Score = 38.7 bits (88), Expect = 0.75,   Method: Composition-based stats.
 Identities = 8/30 (26%), Positives = 15/30 (50%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTD 30
          M    N   +A  A +Q +   ++N++N D
Sbjct: 1  MFEGINTSGSALNAAKQWMEVSSNNIANAD 30


>gi|167553029|ref|ZP_02346779.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Saintpaul str. SARA29]
 gi|205322438|gb|EDZ10277.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Saintpaul str. SARA29]
          Length = 553

 Score = 43.7 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 9/52 (17%), Positives = 23/52 (44%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+TV++N++N +  G+       ++    +    
Sbjct: 1  MSSLINHAMSGLNAAQAALNTVSNNINNYNVAGYTRQTTILAQANSTLGAGG 52


>gi|16760059|ref|NP_455676.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Typhi str. CT18]
 gi|16764539|ref|NP_460154.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Typhimurium str. LT2]
 gi|29142170|ref|NP_805512.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Typhi str. Ty2]
 gi|56413830|ref|YP_150905.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Paratyphi A str. ATCC 9150]
 gi|62179700|ref|YP_216117.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Choleraesuis str. SC-B67]
 gi|167994047|ref|ZP_02575139.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168234109|ref|ZP_02659167.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Kentucky str. CDC 191]
 gi|168237266|ref|ZP_02662324.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Schwarzengrund str. SL480]
 gi|168244782|ref|ZP_02669714.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Heidelberg str. SL486]
 gi|168264024|ref|ZP_02685997.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Hadar str. RI_05P066]
 gi|168467136|ref|ZP_02700978.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Newport str. SL317]
 gi|168822627|ref|ZP_02834627.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Weltevreden str. HI_N05-537]
 gi|194442729|ref|YP_002040437.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Newport str. SL254]
 gi|194448239|ref|YP_002045182.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Heidelberg str. SL476]
 gi|194736355|ref|YP_002114182.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Schwarzengrund str. CVM19633]
 gi|197249622|ref|YP_002146860.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Agona str. SL483]
 gi|197362753|ref|YP_002142390.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Paratyphi A str. AKU_12601]
 gi|198241785|ref|YP_002215954.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Dublin str. CT_02021853]
 gi|200390530|ref|ZP_03217141.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Virchow str. SL491]
 gi|207857309|ref|YP_002243960.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Enteritidis str. P125109]
 gi|213051794|ref|ZP_03344672.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Typhi str. E00-7866]
 gi|213648932|ref|ZP_03378985.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Typhi str. J185]
 gi|213865497|ref|ZP_03387616.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Typhi str. M223]
 gi|224584313|ref|YP_002638111.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Paratyphi C strain RKS4594]
 gi|238910997|ref|ZP_04654834.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Tennessee str. CDC07-0191]
 gi|289828575|ref|ZP_06546400.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Typhi str. E98-3139]
 gi|61224025|sp|P0A1J5|FLGK_SALTY RecName: Full=Flagellar hook-associated protein 1; Short=HAP1
 gi|61224026|sp|P0A1J6|FLGK_SALTI RecName: Full=Flagellar hook-associated protein 1; Short=HAP1
 gi|25300786|pir||AH0640 flagellar hook-associated protein 1 [imported] - Salmonella
          enterica subsp. enterica serovar Typhi (strain CT18)
 gi|47679|emb|CAA36025.1| HAP1 (AA 1-553) [Salmonella enterica subsp. enterica serovar
          Typhimurium]
 gi|16419700|gb|AAL20113.1| hook-filament junction protein 1 [Salmonella enterica subsp.
          enterica serovar Typhimurium str. LT2]
 gi|16502353|emb|CAD08307.1| flagellar hook-associated protein 1 [Salmonella enterica subsp.
          enterica serovar Typhi]
 gi|29137800|gb|AAO69361.1| flagellar hook-associated protein 1 [Salmonella enterica subsp.
          enterica serovar Typhi str. Ty2]
 gi|56128087|gb|AAV77593.1| flagellar hook-associated protein 1 [Salmonella enterica subsp.
          enterica serovar Paratyphi A str. ATCC 9150]
 gi|62127333|gb|AAX65036.1| flagellar biosynthesis, hook-filament junction protein 1
          [Salmonella enterica subsp. enterica serovar
          Choleraesuis str. SC-B67]
 gi|194401392|gb|ACF61614.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Newport str. SL254]
 gi|194406543|gb|ACF66762.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Heidelberg str. SL476]
 gi|194711857|gb|ACF91078.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Schwarzengrund str. CVM19633]
 gi|195630439|gb|EDX49065.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Newport str. SL317]
 gi|197094230|emb|CAR59735.1| flagellar hook-associated protein 1 [Salmonella enterica subsp.
          enterica serovar Paratyphi A str. AKU_12601]
 gi|197213325|gb|ACH50722.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Agona str. SL483]
 gi|197289876|gb|EDY29237.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Schwarzengrund str. SL480]
 gi|197936301|gb|ACH73634.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Dublin str. CT_02021853]
 gi|199602975|gb|EDZ01521.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Virchow str. SL491]
 gi|205328045|gb|EDZ14809.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205331904|gb|EDZ18668.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Kentucky str. CDC 191]
 gi|205336421|gb|EDZ23185.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Heidelberg str. SL486]
 gi|205341046|gb|EDZ27810.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Weltevreden str. HI_N05-537]
 gi|205347332|gb|EDZ33963.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Hadar str. RI_05P066]
 gi|206709112|emb|CAR33445.1| flagellar hook-associated protein 1 [Salmonella enterica subsp.
          enterica serovar Enteritidis str. P125109]
 gi|224468840|gb|ACN46670.1| flagellar hook-associated protein [Salmonella enterica subsp.
          enterica serovar Paratyphi C strain RKS4594]
 gi|261246394|emb|CBG24203.1| flagellar hook-associated protein 1 [Salmonella enterica subsp.
          enterica serovar Typhimurium str. D23580]
 gi|267992957|gb|ACY87842.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Typhimurium str. 14028S]
 gi|301157724|emb|CBW17216.1| flagellar hook-associated protein 1 [Salmonella enterica subsp.
          enterica serovar Typhimurium str. SL1344]
 gi|312912170|dbj|BAJ36144.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Typhimurium str. T000240]
 gi|320086377|emb|CBY96150.1| Flagellar hook-associated protein 1 HAP1 [Salmonella enterica
          subsp. enterica serovar Weltevreden str.
          2007-60-3289-1]
 gi|321223801|gb|EFX48864.1| Flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Typhimurium str. TN061786]
 gi|322616553|gb|EFY13462.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Montevideo str. 315996572]
 gi|322620506|gb|EFY17370.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Montevideo str. 495297-1]
 gi|322622500|gb|EFY19345.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Montevideo str. 495297-3]
 gi|322629651|gb|EFY26426.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Montevideo str. 495297-4]
 gi|322632629|gb|EFY29375.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Montevideo str. 515920-1]
 gi|322636876|gb|EFY33579.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Montevideo str. 515920-2]
 gi|322641586|gb|EFY38224.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Montevideo str. 531954]
 gi|322646487|gb|EFY42997.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Montevideo str.
          NC_MB110209-0054]
 gi|322650024|gb|EFY46442.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Montevideo str. OH_2009072675]
 gi|322653949|gb|EFY50272.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Montevideo str.
          CASC_09SCPH15965]
 gi|322663339|gb|EFY59541.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Montevideo str. 81038-01]
 gi|322670073|gb|EFY66213.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Montevideo str. MD_MDA09249507]
 gi|322674863|gb|EFY70954.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Montevideo str. 414877]
 gi|322676667|gb|EFY72734.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Montevideo str. 366867]
 gi|322682589|gb|EFY78608.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Montevideo str. 413180]
 gi|322686658|gb|EFY82637.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Montevideo str. 446600]
 gi|322714170|gb|EFZ05741.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Choleraesuis str. A50]
 gi|323129453|gb|ADX16883.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Typhimurium str. 4/74]
 gi|323195772|gb|EFZ80948.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Montevideo str. 609458-1]
 gi|323198336|gb|EFZ83440.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Montevideo str. 556150-1]
 gi|323204842|gb|EFZ89836.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Montevideo str. 609460]
 gi|323209183|gb|EFZ94120.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Montevideo str. 507440-20]
 gi|323213433|gb|EFZ98229.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Montevideo str. 556152]
 gi|323217857|gb|EGA02572.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Montevideo str. MB101509-0077]
 gi|323222145|gb|EGA06529.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Montevideo str. MB102109-0047]
 gi|323224917|gb|EGA09175.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Montevideo str. MB110209-0055]
 gi|323229659|gb|EGA13782.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Montevideo str. MB111609-0052]
 gi|323232884|gb|EGA16980.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Montevideo str. 2009083312]
 gi|323240619|gb|EGA24661.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Montevideo str. 2009085258]
 gi|323242933|gb|EGA26954.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Montevideo str. 315731156]
 gi|323250251|gb|EGA34140.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Montevideo str. IA_2009159199]
 gi|323252625|gb|EGA36463.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Montevideo str. IA_2010008282]
 gi|323258847|gb|EGA42500.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Montevideo str. IA_2010008283]
 gi|323261036|gb|EGA44629.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Montevideo str. IA_2010008284]
 gi|323266945|gb|EGA50430.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Montevideo str. IA_2010008285]
 gi|323269986|gb|EGA53435.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Montevideo str. IA_2010008287]
 gi|326623702|gb|EGE30047.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Dublin str. 3246]
 gi|332988074|gb|AEF07057.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Typhimurium str. UK-1]
          Length = 553

 Score = 43.7 bits (101), Expect = 0.023,   Method: Composition-based stats.
 Identities = 9/52 (17%), Positives = 23/52 (44%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+TV++N++N +  G+       ++    +    
Sbjct: 1  MSSLINHAMSGLNAAQAALNTVSNNINNYNVAGYTRQTTILAQANSTLGAGG 52


>gi|330972421|gb|EGH72487.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
          aceris str. M302273PT]
          Length = 686

 Score = 43.7 bits (101), Expect = 0.023,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 35/97 (36%), Gaps = 1/97 (1%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           +  +IGL+   A    ++T+ +N +N DT G+   +V  +     I            +
Sbjct: 1  MSLISIGLSGINASSAAINTIGNNTANVDTAGYSRQQVL-TTASAQIALGQGVGYIGTGT 59

Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98
              + +   S++ T  +   AL  DA          
Sbjct: 60 TLSDVRRIYNSYLDTQLQSSTALSADAVAYSGQASKT 96


>gi|254853085|ref|ZP_05242433.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL
           R2-503]
 gi|255521221|ref|ZP_05388458.1| flagellar basal body rod protein FlgC [Listeria monocytogenes FSL
           J1-175]
 gi|300764524|ref|ZP_07074517.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL
           N1-017]
 gi|258606433|gb|EEW19041.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL
           R2-503]
 gi|300514878|gb|EFK41932.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL
           N1-017]
          Length = 136

 Score = 43.7 bits (101), Expect = 0.023,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 21/40 (52%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           G++  +N +   EM  ++   + + + T+ +  NEK M +
Sbjct: 90  GYVNYANVDMTAEMTNLMVGQKMYAANTSALQANEKMMEK 129



 Score = 38.7 bits (88), Expect = 0.76,   Method: Composition-based stats.
 Identities = 8/30 (26%), Positives = 15/30 (50%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTD 30
          M    N   +A  A +Q +   ++N++N D
Sbjct: 1  MFEGINTSGSALNAAKQWMEVSSNNIANAD 30


>gi|33596145|ref|NP_883788.1| flagellar hook-associated protein FlgK [Bordetella parapertussis
          12822]
 gi|33601547|ref|NP_889107.1| flagellar hook-associated protein FlgK [Bordetella bronchiseptica
          RB50]
 gi|33573148|emb|CAE36796.1| flagellar hook-associated protein 1 [Bordetella parapertussis]
 gi|33575983|emb|CAE33062.1| flagellar hook-associated protein 1 [Bordetella bronchiseptica
          RB50]
          Length = 548

 Score = 43.7 bits (101), Expect = 0.023,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 25/68 (36%), Gaps = 1/68 (1%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
             +N+ L    A +  L T + N++N  TVG+   +V  +   GA +         V  
Sbjct: 1  MNLYNLALTGLNASQAGLETTSHNINNATTVGYSRQRVI-TSTAGAGETGQGFFGRGVQV 59

Query: 62 GKEYLSKE 69
                 +
Sbjct: 60 DTVTRQYD 67


>gi|330943214|gb|EGH45621.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
          pisi str. 1704B]
          Length = 686

 Score = 43.7 bits (101), Expect = 0.023,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 21/38 (55%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39
           +  +IGL+   A    ++T+ +N +N DT G+   +V
Sbjct: 1  MSLISIGLSGINASSAAINTIGNNTANVDTAGYSRQQV 38


>gi|317153715|ref|YP_004121763.1| flagellar basal-body rod protein FlgB [Desulfovibrio aespoeensis
          Aspo-2]
 gi|316943966|gb|ADU63017.1| flagellar basal-body rod protein FlgB [Desulfovibrio aespoeensis
          Aspo-2]
          Length = 136

 Score = 43.7 bits (101), Expect = 0.023,   Method: Composition-based stats.
 Identities = 11/65 (16%), Positives = 22/65 (33%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTG 77
          R + V  N+SN DT  ++  +++F + +    N   +            +          
Sbjct: 22 RQNVVMGNISNVDTPEYKARRLEFEDKLQQALNHDARGKMTRTQQSHLPAVFNADGFQGD 81

Query: 78 TELDF 82
             DF
Sbjct: 82 GIKDF 86


>gi|307637788|gb|ADN80238.1| Flagellar hook-associated protein [Helicobacter pylori 908]
 gi|325996386|gb|ADZ51791.1| Flagellar hook-associated protein [Helicobacter pylori 2018]
 gi|325997974|gb|ADZ50182.1| Flagellar hook-associated protein [Helicobacter pylori 2017]
          Length = 606

 Score = 43.7 bits (101), Expect = 0.023,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 18/52 (34%), Gaps = 8/52 (15%)

Query: 195 KRGFLED--------SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           K+  LE         S  +   EM  +I     + +   +I   ++ +   +
Sbjct: 551 KQSMLETIKKEQLSISQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLL 602



 Score = 38.7 bits (88), Expect = 0.74,   Method: Composition-based stats.
 Identities = 6/29 (20%), Positives = 11/29 (37%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTD 30
           +S N       A +  +    +N+SN  
Sbjct: 5  LSSLNTSYTGLQAHQSMVDVTGNNISNAS 33


>gi|315498435|ref|YP_004087239.1| flagellar basal-body rod protein flgc [Asticcacaulis excentricus
          CB 48]
 gi|315416447|gb|ADU13088.1| flagellar basal-body rod protein FlgC [Asticcacaulis excentricus
          CB 48]
          Length = 140

 Score = 43.7 bits (101), Expect = 0.023,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 21/46 (45%), Gaps = 7/46 (15%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSE 43
           ++  +A  A + R+  +A+N++N D+ G       +R     F  
Sbjct: 13 LSVAASALRAQQARMRIIAENIANADSTGQTPGADPYRGQIPVFEA 58



 Score = 39.1 bits (89), Expect = 0.58,   Method: Composition-based stats.
 Identities = 6/42 (14%), Positives = 18/42 (42%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G+++ SN  S+ +   M    + + +   +I+       + +
Sbjct: 94  GYVKRSNVKSLIQSMDMRDAQRAYEANLNVIETTRSMEQKTL 135


>gi|89075502|ref|ZP_01161913.1| hypothetical flagellar hook-associated protein FlgM
          [Photobacterium sp. SKA34]
 gi|89048774|gb|EAR54345.1| hypothetical flagellar hook-associated protein FlgM
          [Photobacterium sp. SKA34]
          Length = 778

 Score = 43.7 bits (101), Expect = 0.023,   Method: Composition-based stats.
 Identities = 8/47 (17%), Positives = 17/47 (36%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51
            +G++     +++L   + N+SN  T G+    V            
Sbjct: 6  MQLGISGLRTSQKQLDVTSHNISNVHTAGYSRQVVDQKAADAQWSGG 52


>gi|315301954|ref|ZP_07872952.1| flagellar hook-associated protein FlgK [Listeria ivanovii FSL
           F6-596]
 gi|313629677|gb|EFR97812.1| flagellar hook-associated protein FlgK [Listeria ivanovii FSL
           F6-596]
          Length = 444

 Score = 43.7 bits (101), Expect = 0.023,   Method: Composition-based stats.
 Identities = 16/126 (12%), Positives = 34/126 (26%), Gaps = 3/126 (2%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
           FN  L+   A +        N+SN +T G+    V    +          K +       
Sbjct: 6   FNTSLSGMSAAQIANMVAQQNISNMNTPGYIRQAVDQQAIYSDGGLLGGNKQTGYGVKVT 65

Query: 65  YLSKEVGSFISTGTELDFALEGDAWFAL---ESPRGIILTRDGRFKVTDDGSLVSASGKY 121
            + +     ++T      A +  + +          +  T        +  +  +A G  
Sbjct: 66  DIKRLTNVALTTQYNNQIAKQSASLYESGALNQALNLFGTPGKNTPSDNLDNFFTAWGAL 125

Query: 122 PVLDMA 127
                 
Sbjct: 126 AKNPDQ 131


>gi|238751767|ref|ZP_04613255.1| hypothetical protein yrohd0001_35400 [Yersinia rohdei ATCC 43380]
 gi|238710038|gb|EEQ02268.1| hypothetical protein yrohd0001_35400 [Yersinia rohdei ATCC 43380]
          Length = 549

 Score = 43.7 bits (101), Expect = 0.023,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 20/39 (51%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
           N  ++   A +  LSTV++N+SN    G+      F++
Sbjct: 1  MNTAMSGLSAAQYGLSTVSNNISNYQVAGYNRQNAIFTQ 39


>gi|188995967|ref|YP_001930218.1| flagellar hook-associated protein FlgK [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|188931034|gb|ACD65664.1| flagellar hook-associated protein FlgK [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 475

 Score = 43.7 bits (101), Expect = 0.023,   Method: Composition-based stats.
 Identities = 5/36 (13%), Positives = 14/36 (38%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            N   E+  +  L + + +   +I   ++ M   + 
Sbjct: 437 VNMDEELINLTKLQRSYQAAARIITVTDELMQTILN 472


>gi|197262560|ref|ZP_03162634.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Saintpaul str. SARA23]
 gi|204930865|ref|ZP_03221738.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Javiana str. GA_MM04042433]
 gi|197240815|gb|EDY23435.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Saintpaul str. SARA23]
 gi|204320324|gb|EDZ05528.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Javiana str. GA_MM04042433]
          Length = 553

 Score = 43.7 bits (101), Expect = 0.023,   Method: Composition-based stats.
 Identities = 9/52 (17%), Positives = 23/52 (44%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+TV++N++N +  G+       ++    +    
Sbjct: 1  MSSLINHAMSGLNAAQAALNTVSNNINNYNVAGYTRQTTILAQANSTLGAGG 52


>gi|241203104|ref|YP_002974200.1| flagellar basal body rod protein FlgC [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240856994|gb|ACS54661.1| flagellar basal-body rod protein FlgC [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 138

 Score = 43.7 bits (101), Expect = 0.023,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 35/99 (35%), Gaps = 12/99 (12%)

Query: 145 KGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNA 204
            G+   +   + T+G+  V + +G    E    +P   P             G ++  N 
Sbjct: 51  FGQQMDRTNGVETVGVKKVGVDEGDFSTEFDPSNPAADPK------------GVVKLPNV 98

Query: 205 NSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           N + EM  M    + +++    I +    +   I  + S
Sbjct: 99  NILVEMADMREANRSYDANLQTIKQTRDLISSTIDLLKS 137



 Score = 42.5 bits (98), Expect = 0.051,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 22/54 (40%), Gaps = 7/54 (12%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNT----DTVG---FRTIKVKFSEVVGAIKN 50
          +  I  +   A   RL  V++N++N     DT G   +R   + F + +     
Sbjct: 7  AMKIAGSGLEAQSTRLRIVSENIANARSTGDTPGADPYRRKTITFGQQMDRTNG 60


>gi|152975156|ref|YP_001374673.1| flagellar basal body rod protein FlgC [Bacillus cereus subsp.
           cytotoxis NVH 391-98]
 gi|152023908|gb|ABS21678.1| flagellar basal-body rod protein FlgC [Bacillus cytotoxicus NVH
           391-98]
          Length = 137

 Score = 43.7 bits (101), Expect = 0.023,   Method: Composition-based stats.
 Identities = 16/128 (12%), Positives = 45/128 (35%), Gaps = 3/128 (2%)

Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168
              GS ++A+ K+  +   ++               +  +  +        L        
Sbjct: 6   NASGSGLTAARKWMEVSSDNIVNANTTSAPDGEPYRRRSVVLESNRNFASMLKEAPNDGV 65

Query: 169 FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228
            + R  S  + N+   P    +      G++   N +   EM  ++   + + + T++++
Sbjct: 66  KITRIESDPNENLVYNPSHPHANAE---GYVRYPNIDMTAEMTNVMVAQKMYEANTSVLN 122

Query: 229 ENEKSMLE 236
            N+K + +
Sbjct: 123 ANKKMLDK 130



 Score = 41.0 bits (94), Expect = 0.16,   Method: Composition-based stats.
 Identities = 14/88 (15%), Positives = 28/88 (31%), Gaps = 12/88 (13%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKV------KFSEVVGAI 48
          M  + N   +   A  + +   +DN+ N +T        +R   V       F+ ++   
Sbjct: 1  MFQAINASGSGLTAARKWMEVSSDNIVNANTTSAPDGEPYRRRSVVLESNRNFASMLKEA 60

Query: 49 KNDIDQKISFVASGKEYLSKEVGSFIST 76
           ND  +     +   E L        + 
Sbjct: 61 PNDGVKITRIESDPNENLVYNPSHPHAN 88


>gi|219670203|ref|YP_002460638.1| flagellar hook-associated protein FlgK [Desulfitobacterium
          hafniense DCB-2]
 gi|219540463|gb|ACL22202.1| flagellar hook-associated protein FlgK [Desulfitobacterium
          hafniense DCB-2]
          Length = 583

 Score = 43.7 bits (101), Expect = 0.023,   Method: Composition-based stats.
 Identities = 8/53 (15%), Positives = 18/53 (33%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK 55
          +   +   A  + +  L T   N++N +T+G+    V            +   
Sbjct: 6  SGLELARRALESQQIALDTTGHNIANANTIGYTRQVVNLQATSPDSIPGMGHY 58



 Score = 42.5 bits (98), Expect = 0.052,   Method: Composition-based stats.
 Identities = 3/39 (7%), Positives = 14/39 (35%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            N   E+  +I   + + +   ++   +  +   +  + 
Sbjct: 542 VNMDEEITNLIKFQKSYTAAARIVTMLDSMLDTIVNGMG 580


>gi|89067518|ref|ZP_01155031.1| flagellar hook-associated protein [Oceanicola granulosus
          HTCC2516]
 gi|89047087|gb|EAR53141.1| flagellar hook-associated protein [Oceanicola granulosus
          HTCC2516]
          Length = 478

 Score = 43.7 bits (101), Expect = 0.024,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 22/50 (44%), Gaps = 1/50 (2%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGF-RTIKVKFSEVVGAIKNDI 52
          S    L+      +R   V+ N++N  T G+ R      S ++G ++ D 
Sbjct: 6  SIGSALSGLEVASRRAEIVSGNIANALTEGYGRRSLAVSSTMLGGVRADG 55


>gi|322432968|ref|YP_004210217.1| flagellar hook-associated protein FlgK [Acidobacterium sp.
          MP5ACTX9]
 gi|321165195|gb|ADW70899.1| flagellar hook-associated protein FlgK [Acidobacterium sp.
          MP5ACTX9]
          Length = 457

 Score = 43.7 bits (101), Expect = 0.024,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 21/52 (40%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
           ++ N    A +A E  +S   +N++N  T G+    V   E     +  + 
Sbjct: 5  MSTLNTASEALMAQEAEISVTNNNIANASTAGYTRETVSLQEAAPTSQGALS 56



 Score = 36.0 bits (81), Expect = 4.9,   Method: Composition-based stats.
 Identities = 6/40 (15%), Positives = 12/40 (30%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           S  +   E   +I   Q + +   ++          I  I
Sbjct: 415 SGVSIDEESANLIRYQQAYEAAAKVVSTISTLFDTTINMI 454


>gi|162661125|gb|EDQ48677.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 515

 Score = 43.7 bits (101), Expect = 0.024,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 23/65 (35%)

Query: 11  AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
           A     QRL+ +A N++N DT G++   + F E +      +    S           + 
Sbjct: 396 ALKIRTQRLAIIASNIANADTPGYQAKDLDFKEALERSNATMLSVSSTSKGHIPSSEMKS 455

Query: 71  GSFIS 75
                
Sbjct: 456 IYDTQ 460


>gi|325289235|ref|YP_004265416.1| flagellar hook-associated protein FlgK [Syntrophobotulus
          glycolicus DSM 8271]
 gi|324964636|gb|ADY55415.1| flagellar hook-associated protein FlgK [Syntrophobotulus
          glycolicus DSM 8271]
          Length = 512

 Score = 43.7 bits (101), Expect = 0.024,   Method: Composition-based stats.
 Identities = 16/89 (17%), Positives = 33/89 (37%), Gaps = 3/89 (3%)

Query: 1  MQT--SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
          M +     +GL    A +  L+T+  N+SN  T G+ + +V   +   A+       +  
Sbjct: 1  MNSFFGLTVGLKGLTASQAALNTINHNISNAGTTGY-SRQVVAQKASRALAAANGAGMVG 59

Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGD 87
                 + +    F+      + A  G+
Sbjct: 60 TGVDITTIVQIRNVFLDRRYWQENAQYGE 88



 Score = 36.8 bits (83), Expect = 2.8,   Method: Composition-based stats.
 Identities = 4/38 (10%), Positives = 15/38 (39%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
            +   E   +I     +N+   ++   ++ +   I ++
Sbjct: 472 VSLDEETSNLIKYQLAYNAAAKVMSVMDEVLDVTINSL 509


>gi|229172391|ref|ZP_04299950.1| Flagellar basal-body rod protein FlgC [Bacillus cereus MM3]
 gi|228610862|gb|EEK68125.1| Flagellar basal-body rod protein FlgC [Bacillus cereus MM3]
          Length = 137

 Score = 43.7 bits (101), Expect = 0.024,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 22/40 (55%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           G++   N +   EM  ++   + + + T++++ N+K + +
Sbjct: 91  GYVRYPNIDVTAEMTNVMVAQKMYEANTSVLNANKKMLDK 130



 Score = 42.2 bits (97), Expect = 0.069,   Method: Composition-based stats.
 Identities = 5/33 (15%), Positives = 13/33 (39%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG 33
          M  + N   +      + +   ++N+ N +T  
Sbjct: 1  MFQAINASGSGLTTARKWMEVTSNNIVNANTTA 33


>gi|167639076|ref|ZP_02397349.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           A0193]
 gi|177650375|ref|ZP_02933342.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           A0174]
 gi|254734585|ref|ZP_05192297.1| flagellar basal body rod protein FlgC [Bacillus anthracis str.
           Western North America USA6153]
 gi|167512866|gb|EDR88239.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           A0193]
 gi|172083519|gb|EDT68579.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           A0174]
          Length = 137

 Score = 43.7 bits (101), Expect = 0.024,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 22/40 (55%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           G++   N +   EM  ++   + + + T++++ N+K + +
Sbjct: 91  GYVRYPNIDVTAEMTNVMVAQKMYEANTSVLNANKKMLDK 130



 Score = 42.2 bits (97), Expect = 0.068,   Method: Composition-based stats.
 Identities = 5/33 (15%), Positives = 13/33 (39%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG 33
          M  + N   +      + +   ++N+ N +T  
Sbjct: 1  MFQAINASGSGLTTARKWMEVTSNNIVNANTTA 33


>gi|104782846|ref|YP_609344.1| flagellar basal body rod protein FlgB [Pseudomonas entomophila
          L48]
 gi|95111833|emb|CAK16557.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
          [Pseudomonas entomophila L48]
          Length = 135

 Score = 43.7 bits (101), Expect = 0.024,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 26/61 (42%)

Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76
          QR   +A+N++N DT  ++   + FS V+ A  +   +    +        +  G  ++ 
Sbjct: 21 QRAEVLANNIANADTPNYKARDMDFSSVLAAEADKQQKGRIALDRTNSRHIEAEGLAMAD 80

Query: 77 G 77
           
Sbjct: 81 D 81


>gi|209967001|ref|YP_002299916.1| flagellar hook-associated protein FlgK, putative [Rhodospirillum
          centenum SW]
 gi|209960467|gb|ACJ01104.1| flagellar hook-associated protein FlgK, putative [Rhodospirillum
          centenum SW]
          Length = 526

 Score = 43.7 bits (101), Expect = 0.024,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 22/61 (36%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
          + +  ++   A +  ++TV+ N SN  T G+    V     V        +      +  
Sbjct: 6  AISSAISGLRATQNNIATVSQNTSNIQTPGYTRKFVTQEAQVHTPTTGGVRTGQVQRTFD 65

Query: 64 E 64
          +
Sbjct: 66 Q 66



 Score = 36.4 bits (82), Expect = 4.0,   Method: Composition-based stats.
 Identities = 5/34 (14%), Positives = 13/34 (38%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
            N   E+  +  L + + + + +I   E+     
Sbjct: 488 VNLDEEVVMLTVLQRSYAASSRVITTVEQMYDSL 521


>gi|30261743|ref|NP_844120.1| flagellar basal body rod protein FlgC [Bacillus anthracis str.
           Ames]
 gi|47526963|ref|YP_018312.1| flagellar basal body rod protein FlgC [Bacillus anthracis str.
           'Ames Ancestor']
 gi|49184573|ref|YP_027825.1| flagellar basal body rod protein FlgC [Bacillus anthracis str.
           Sterne]
 gi|49480942|ref|YP_035864.1| flagellar basal body rod protein FlgC [Bacillus thuringiensis
           serovar konkukian str. 97-27]
 gi|52143711|ref|YP_083115.1| flagellar basal body rod protein FlgC [Bacillus cereus E33L]
 gi|65319012|ref|ZP_00391971.1| COG1558: Flagellar basal body rod protein [Bacillus anthracis str.
           A2012]
 gi|165869530|ref|ZP_02214189.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           A0488]
 gi|167633252|ref|ZP_02391577.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           A0442]
 gi|170686301|ref|ZP_02877523.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           A0465]
 gi|170706453|ref|ZP_02896913.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           A0389]
 gi|190566322|ref|ZP_03019240.1| flagellar basal-body rod protein FlgC [Bacillus anthracis
           Tsiankovskii-I]
 gi|196038959|ref|ZP_03106266.1| flagellar basal-body rod protein FlgC [Bacillus cereus NVH0597-99]
 gi|218902859|ref|YP_002450693.1| flagellar basal-body rod protein FlgC [Bacillus cereus AH820]
 gi|227815498|ref|YP_002815507.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str. CDC
           684]
 gi|228914323|ref|ZP_04077938.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|228926780|ref|ZP_04089848.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|228933028|ref|ZP_04095891.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|228945347|ref|ZP_04107702.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|229090705|ref|ZP_04221938.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock3-42]
 gi|229121296|ref|ZP_04250527.1| Flagellar basal-body rod protein FlgC [Bacillus cereus 95/8201]
 gi|229155315|ref|ZP_04283426.1| Flagellar basal-body rod protein FlgC [Bacillus cereus ATCC 4342]
 gi|229602307|ref|YP_002866143.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           A0248]
 gi|254683233|ref|ZP_05147094.1| flagellar basal body rod protein FlgC [Bacillus anthracis str.
           CNEVA-9066]
 gi|254723821|ref|ZP_05185607.1| flagellar basal body rod protein FlgC [Bacillus anthracis str.
           A1055]
 gi|254740994|ref|ZP_05198682.1| flagellar basal body rod protein FlgC [Bacillus anthracis str.
           Kruger B]
 gi|254755237|ref|ZP_05207271.1| flagellar basal body rod protein FlgC [Bacillus anthracis str.
           Vollum]
 gi|254759773|ref|ZP_05211797.1| flagellar basal body rod protein FlgC [Bacillus anthracis str.
           Australia 94]
 gi|300117337|ref|ZP_07055127.1| flagellar basal body rod protein FlgC [Bacillus cereus SJ1]
 gi|301053281|ref|YP_003791492.1| flagellar basal body rod protein [Bacillus anthracis CI]
 gi|30255971|gb|AAP25606.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           Ames]
 gi|47502111|gb|AAT30787.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           'Ames Ancestor']
 gi|49178500|gb|AAT53876.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           Sterne]
 gi|49332498|gb|AAT63144.1| flagellar basal-body rod protein [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|51977180|gb|AAU18730.1| flagellar basal-body rod protein [Bacillus cereus E33L]
 gi|164714970|gb|EDR20488.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           A0488]
 gi|167531290|gb|EDR93968.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           A0442]
 gi|170128551|gb|EDS97418.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           A0389]
 gi|170669998|gb|EDT20739.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           A0465]
 gi|190562457|gb|EDV16424.1| flagellar basal-body rod protein FlgC [Bacillus anthracis
           Tsiankovskii-I]
 gi|196030104|gb|EDX68704.1| flagellar basal-body rod protein FlgC [Bacillus cereus NVH0597-99]
 gi|218535692|gb|ACK88090.1| flagellar basal-body rod protein FlgC [Bacillus cereus AH820]
 gi|227007024|gb|ACP16767.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str. CDC
           684]
 gi|228628240|gb|EEK84956.1| Flagellar basal-body rod protein FlgC [Bacillus cereus ATCC 4342]
 gi|228662141|gb|EEL17750.1| Flagellar basal-body rod protein FlgC [Bacillus cereus 95/8201]
 gi|228692647|gb|EEL46373.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock3-42]
 gi|228814319|gb|EEM60585.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|228826629|gb|EEM72400.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|228832893|gb|EEM78462.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|228845317|gb|EEM90353.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|229266715|gb|ACQ48352.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str.
           A0248]
 gi|298725172|gb|EFI65824.1| flagellar basal body rod protein FlgC [Bacillus cereus SJ1]
 gi|300375450|gb|ADK04354.1| flagellar basal body rod protein [Bacillus cereus biovar anthracis
           str. CI]
          Length = 137

 Score = 43.7 bits (101), Expect = 0.024,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 22/40 (55%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           G++   N +   EM  ++   + + + T++++ N+K + +
Sbjct: 91  GYVRYPNIDVTAEMTNVMVAQKMYEANTSVLNANKKMLDK 130



 Score = 42.2 bits (97), Expect = 0.071,   Method: Composition-based stats.
 Identities = 5/33 (15%), Positives = 13/33 (39%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG 33
          M  + N   +      + +   ++N+ N +T  
Sbjct: 1  MFQAINASGSGLTTARKWMEVTSNNIVNANTTA 33


>gi|313639049|gb|EFS04037.1| flagellar hook-associated protein FlgK [Listeria seeligeri FSL
           S4-171]
          Length = 507

 Score = 43.7 bits (101), Expect = 0.024,   Method: Composition-based stats.
 Identities = 16/126 (12%), Positives = 34/126 (26%), Gaps = 3/126 (2%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
           FN  L+   A +        N+SN +T G+    V    +          K +       
Sbjct: 6   FNTSLSGMSAAQIANMVAQQNISNMNTPGYIRQAVDQQALYSDGGLLGGNKQTGYGVKVT 65

Query: 65  YLSKEVGSFISTGTELDFALEGDAWFAL---ESPRGIILTRDGRFKVTDDGSLVSASGKY 121
            + +     ++T      A +  + +          +  T        +  +  +A G  
Sbjct: 66  DIKRLTNVALTTQYNNQIAKQSASLYESGALNQALNLFGTPGKNTPSDNLDNFFTAWGAL 125

Query: 122 PVLDMA 127
                 
Sbjct: 126 AKNPDQ 131



 Score = 37.5 bits (85), Expect = 1.5,   Method: Composition-based stats.
 Identities = 5/35 (14%), Positives = 12/35 (34%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            N   EM  ++     + + T  ++     M   +
Sbjct: 470 VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALL 504


>gi|255305269|ref|ZP_05349441.1| flagellar basal-body rod protein [Clostridium difficile ATCC 43255]
          Length = 105

 Score = 43.7 bits (101), Expect = 0.024,   Method: Composition-based stats.
 Identities = 18/93 (19%), Positives = 33/93 (35%), Gaps = 2/93 (2%)

Query: 11  AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
           A  A   R  T+A+N++N +T G++   V F E +      I++KI      +   +   
Sbjct: 10  ALDATNLRSQTIANNIANINTEGYKRHYVTFEETLNDAMPKIEEKIDNSKGLRVDGNNVD 69

Query: 71  GSFISTGTELDFALEGDAWFALESPRGIILTRD 103
                       A          +   I +T+ 
Sbjct: 70  IEEEKVNQA--MATLQYNALISFANGKIAMTKS 100


>gi|134095091|ref|YP_001100166.1| flagellar hook-associated protein FlgK [Herminiimonas
          arsenicoxydans]
 gi|133738994|emb|CAL62042.1| putative flagellar hook-associated protein 1 FlgK-like
          [Herminiimonas arsenicoxydans]
          Length = 659

 Score = 43.7 bits (101), Expect = 0.024,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 19/47 (40%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA 47
          M    +I  +   A    ++T   N++N  T G+    V  + + G 
Sbjct: 1  MSNLLSIAKSGLAAAHAGIATTGHNIANQATPGYSRQLVIQASLGGQ 47



 Score = 37.9 bits (86), Expect = 1.3,   Method: Composition-based stats.
 Identities = 21/146 (14%), Positives = 43/146 (29%), Gaps = 1/146 (0%)

Query: 94  SPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK 153
            P    +       V+  G+ +  SG     D  S+        +  N+   GE+  K  
Sbjct: 512 PPAETTVPYTAGAIVSFGGAEIKISGTPADGDTFSISANTNGDGDNRNMLLLGELQTKNV 571

Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQM 213
           +      Y+   SQ  V +  +        +  E      ++     +S  N   E   +
Sbjct: 572 LQGGTASYNSAYSQ-LVSQVGNKTRELETNSLAEGALLKQMQTAQQSESGVNLDEEATNL 630

Query: 214 IHLTQKFNSITTLIDENEKSMLEAIR 239
           +   Q + +   ++          I 
Sbjct: 631 LRYQQAYQASGKVMQAVSDMFDVLIS 656


>gi|291617026|ref|YP_003519768.1| FlgK [Pantoea ananatis LMG 20103]
 gi|291152056|gb|ADD76640.1| FlgK [Pantoea ananatis LMG 20103]
          Length = 546

 Score = 43.7 bits (101), Expect = 0.025,   Method: Composition-based stats.
 Identities = 15/167 (8%), Positives = 46/167 (27%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M +  N  ++   A +  LST ++N+SN    G+       +E    ++           
Sbjct: 1   MSSIINSAMSGLSAAQAALSTTSNNISNYTVAGYSRQTTILAEANSTLQGKSYYGNGVNV 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           +G +       +    G+   +      +  + +   ++ T          G   +    
Sbjct: 61  TGVQREYDSFIAAQLRGSSATYNAANTQYSQVSNIDDLMSTSTTNLSTAIQGFFSNMQNV 120

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167
               +  +    +    +      + +      +  ++         
Sbjct: 121 VSNANDPAARQSMLSNSQGLVNQFQTQAQYLTNMQNSVNTNIASNVD 167


>gi|322421655|ref|YP_004200878.1| flagellar hook-associated protein FlgK [Geobacter sp. M18]
 gi|320128042|gb|ADW15602.1| flagellar hook-associated protein FlgK [Geobacter sp. M18]
          Length = 481

 Score = 43.7 bits (101), Expect = 0.025,   Method: Composition-based stats.
 Identities = 24/187 (12%), Positives = 54/187 (28%), Gaps = 8/187 (4%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--IDQKISFVASG 62
           F+I  +   A    +    +N+SN +T G+   +V       +  N   +   +   A  
Sbjct: 7   FDIASSGITANRLAIEVTGENISNVNTEGYSRQRVVMENKPVSTANGFALGTGVEIAAVQ 66

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSL------VS 116
           + Y +      ++  +    +L   +      P    LT DG      +         V+
Sbjct: 67  RSYDNMLQLQLVNANSTYQESLAQQSALEQIEPSFNSLTSDGLGTAVANFFGAFQDLSVN 126

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
            SG      + +    +       +       S     +  +     D ++         
Sbjct: 127 PSGSAERQAVLTRAQIMVDSFHQLDSSLTSVASTADNNLVGITAEVTDNARNLALVNTQI 186

Query: 177 ISPNIPP 183
           ++ N   
Sbjct: 187 LATNSVG 193



 Score = 36.0 bits (81), Expect = 4.3,   Method: Composition-based stats.
 Identities = 5/41 (12%), Positives = 13/41 (31%), Gaps = 2/41 (4%)

Query: 197 GFLEDSN--ANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
             L  SN   +   E+  +    + F     +++     + 
Sbjct: 434 NALRASNSEVSLDEELLNLTRYQRAFQGSAKVVNAATDMLD 474


>gi|259908806|ref|YP_002649162.1| flagellar hook-associated protein FlgK [Erwinia pyrifoliae
          Ep1/96]
 gi|224964428|emb|CAX55937.1| Flagellar hook-filament junction protein 1 [Erwinia pyrifoliae
          Ep1/96]
          Length = 551

 Score = 43.7 bits (101), Expect = 0.025,   Method: Composition-based stats.
 Identities = 8/51 (15%), Positives = 19/51 (37%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51
          M    N  ++   A    L+T ++N++N    G+       ++    +   
Sbjct: 1  MSNLINTAMSGLSASSAALNTTSNNITNYAVTGYSRQTTVLNQSASTLSGG 51


>gi|27381968|ref|NP_773497.1| flagellar hook-associated protein FlgK [Bradyrhizobium japonicum
           USDA 110]
 gi|27355138|dbj|BAC52122.1| flgK [Bradyrhizobium japonicum USDA 110]
          Length = 491

 Score = 43.7 bits (101), Expect = 0.025,   Method: Composition-based stats.
 Identities = 6/41 (14%), Positives = 19/41 (46%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   EM  M+ + + +++ + +I   ++ +   +  + 
Sbjct: 450 SGVNMDDEMSLMLQVERTYSASSKIISTVDQMLQSLLAAVG 490


>gi|330975982|gb|EGH76048.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
          aptata str. DSM 50252]
          Length = 686

 Score = 43.7 bits (101), Expect = 0.025,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 21/38 (55%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39
           +  +IGL+   A    ++T+ +N +N DT G+   +V
Sbjct: 1  MSLISIGLSGINASSAAINTIGNNTANVDTAGYSRQQV 38


>gi|320325090|gb|EFW81159.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv.
          glycinea str. B076]
          Length = 135

 Score = 43.7 bits (101), Expect = 0.025,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 30/80 (37%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
            +  I   A     QR   +A+N+SN DT  F+   + FS V+ A  + +      +  
Sbjct: 6  DKALGIHEKALNFRAQRAEVLANNISNADTPNFKARDLDFSSVLAAENDKVQNGYFALNK 65

Query: 62 GKEYLSKEVGSFISTGTELD 81
                +  G     GT + 
Sbjct: 66 TNSRHIEAEGMGNDDGTLMY 85


>gi|304397210|ref|ZP_07379089.1| flagellar hook-associated protein FlgK [Pantoea sp. aB]
 gi|304355359|gb|EFM19727.1| flagellar hook-associated protein FlgK [Pantoea sp. aB]
          Length = 549

 Score = 43.7 bits (101), Expect = 0.025,   Method: Composition-based stats.
 Identities = 15/159 (9%), Positives = 48/159 (30%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M +  N  ++   A +  LST ++N+SN    G+       ++    ++ +         
Sbjct: 1   MSSIINSAMSGLSAAQAALSTTSNNISNYTVAGYSRQTTVLAQANSTLQGNSYYGNGVNI 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           +G +       +    G+  +++        + +   ++ T       +  G   +    
Sbjct: 61  TGVQREYDAFIATQLRGSSANYSAVSTQHSQISNIDDLLSTSTTSLSTSLQGFFTNLQNV 120

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG 159
               +  S    +    +      +        +  ++ 
Sbjct: 121 VSNANDPSARQSMLSNAQGLVSQFQTSAQYLNNMQNSVN 159


>gi|229826299|ref|ZP_04452368.1| hypothetical protein GCWU000182_01671 [Abiotrophia defectiva ATCC
          49176]
 gi|229789169|gb|EEP25283.1| hypothetical protein GCWU000182_01671 [Abiotrophia defectiva ATCC
          49176]
          Length = 131

 Score = 43.7 bits (101), Expect = 0.025,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 22/50 (44%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          A  A   R + +++N++N DT G++   V+F   +             VA
Sbjct: 16 AADASWLRNNLISNNIANNDTPGYKRKDVQFESYLAMELIRGGSLRHRVA 65


>gi|126697816|ref|YP_001086713.1| flagellar basal-body rod protein [Clostridium difficile 630]
 gi|115249253|emb|CAJ67066.1| Flagellar basal-body rod protein FlgB [Clostridium difficile]
          Length = 105

 Score = 43.7 bits (101), Expect = 0.025,   Method: Composition-based stats.
 Identities = 10/35 (28%), Positives = 19/35 (54%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV 45
             A   R  T+A+N++N +T G++   + F E +
Sbjct: 10 GLDATNLRSQTIANNIANINTEGYKRHYITFEETL 44


>gi|84502400|ref|ZP_01000536.1| flagellar basal-body rod protein flgB [Oceanicola batsensis
          HTCC2597]
 gi|84389212|gb|EAQ02009.1| flagellar basal-body rod protein flgB [Oceanicola batsensis
          HTCC2597]
          Length = 133

 Score = 43.7 bits (101), Expect = 0.025,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKV-KFSEVVGAIKNDI 52
              L  R   +A N++N+DT G++   V  F+EV+       
Sbjct: 15 RMNWLGARQQVIAQNVANSDTPGYKARDVSNFAEVLRGAGGAG 57


>gi|114562339|ref|YP_749852.1| flagellar basal body rod protein FlgB [Shewanella frigidimarina
           NCIMB 400]
 gi|114333632|gb|ABI71014.1| flagellar basal-body rod protein FlgB [Shewanella frigidimarina
           NCIMB 400]
          Length = 132

 Score = 43.7 bits (101), Expect = 0.025,   Method: Composition-based stats.
 Identities = 14/105 (13%), Positives = 30/105 (28%)

Query: 17  QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76
           QR   ++ N++N +T  ++   V F+  + A  +          + K +    +      
Sbjct: 21  QRAEVISSNIANANTPHYKAQDVNFASAMQAASSHQKGLSMSQTTEKHFDLTALSQQHVQ 80

Query: 77  GTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
               + A  GD              ++        G L       
Sbjct: 81  YRMPNQADTGDGNTVDTQKEQAAFMQNALEYQMSLGFLEGKFNGM 125


>gi|289433983|ref|YP_003463855.1| flagellar hook-associated protein 1-related protein [Listeria
           seeligeri serovar 1/2b str. SLCC3954]
 gi|289170227|emb|CBH26767.1| flagellar hook-associated protein 1-related protein [Listeria
           seeligeri serovar 1/2b str. SLCC3954]
          Length = 507

 Score = 43.7 bits (101), Expect = 0.025,   Method: Composition-based stats.
 Identities = 16/126 (12%), Positives = 34/126 (26%), Gaps = 3/126 (2%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
           FN  L+   A +        N+SN +T G+    V    +          K +       
Sbjct: 6   FNTSLSGMSAAQIANMVAQQNISNMNTPGYIRQAVDQQALYSDGGLLGGNKQTGYGVKVT 65

Query: 65  YLSKEVGSFISTGTELDFALEGDAWFAL---ESPRGIILTRDGRFKVTDDGSLVSASGKY 121
            + +     ++T      A +  + +          +  T        +  +  +A G  
Sbjct: 66  DIKRLTNVALTTQYNNQIAKQSASLYESGALNQALNLFGTPGKNTPSDNLDNFFTAWGAL 125

Query: 122 PVLDMA 127
                 
Sbjct: 126 AKNPDQ 131



 Score = 37.5 bits (85), Expect = 1.6,   Method: Composition-based stats.
 Identities = 5/35 (14%), Positives = 12/35 (34%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            N   EM  ++     + + T  ++     M   +
Sbjct: 470 VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALL 504


>gi|224436692|ref|ZP_03657696.1| flagellar hook-associated protein FlgK [Helicobacter cinaedi CCUG
           18818]
 gi|313143190|ref|ZP_07805383.1| flagellar hook-protein FlgK [Helicobacter cinaedi CCUG 18818]
 gi|313128221|gb|EFR45838.1| flagellar hook-protein FlgK [Helicobacter cinaedi CCUG 18818]
          Length = 606

 Score = 43.7 bits (101), Expect = 0.025,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 14/37 (37%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  +   EM  +I     + +   +I   ++ +   +
Sbjct: 566 SQVSLDEEMVNLIKFQGGYAANAKVITTIDRMIETLL 602



 Score = 39.1 bits (89), Expect = 0.51,   Method: Composition-based stats.
 Identities = 6/29 (20%), Positives = 11/29 (37%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTD 30
           +S N       A +  +    +N+SN  
Sbjct: 5  LSSLNTSYTGLQAHQLMVDVTGNNISNAS 33


>gi|118477180|ref|YP_894331.1| flagellar basal body rod protein FlgC [Bacillus thuringiensis str.
           Al Hakam]
 gi|118416405|gb|ABK84824.1| flagellar basal-body rod protein [Bacillus thuringiensis str. Al
           Hakam]
          Length = 137

 Score = 43.7 bits (101), Expect = 0.025,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 22/40 (55%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           G++   N +   EM  ++   + + + T++++ N+K + +
Sbjct: 91  GYVRYPNIDVTAEMTNVMVAQKMYEANTSVLNANKKMLDK 130



 Score = 42.2 bits (97), Expect = 0.072,   Method: Composition-based stats.
 Identities = 5/33 (15%), Positives = 13/33 (39%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG 33
          M  + N   +      + +   ++N+ N +T  
Sbjct: 1  MFQAINASGSGLTTARKWMEVTSNNIVNANTTA 33


>gi|296157459|ref|ZP_06840294.1| flagellar basal-body rod protein FlgB [Burkholderia sp. Ch1-1]
 gi|295892231|gb|EFG72014.1| flagellar basal-body rod protein FlgB [Burkholderia sp. Ch1-1]
          Length = 164

 Score = 43.7 bits (101), Expect = 0.025,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 27/70 (38%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A      R   ++ N++N DT G++   V F+  +              AS    L+   
Sbjct: 15 ALDVRAYRQELLSSNIANADTPGYKARDVDFASSLAGALKKAGGSAGTAASNNSTLAMTQ 74

Query: 71 GSFISTGTEL 80
           + +++G  +
Sbjct: 75 PAGVTSGMSM 84


>gi|238752868|ref|ZP_04614333.1| Flagellar basal-body rod protein FlgC [Yersinia rohdei ATCC 43380]
 gi|238708907|gb|EEQ01160.1| Flagellar basal-body rod protein FlgC [Yersinia rohdei ATCC 43380]
          Length = 141

 Score = 43.7 bits (101), Expect = 0.025,   Method: Composition-based stats.
 Identities = 7/44 (15%), Positives = 20/44 (45%)

Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +G++     N + EM  M+  ++ F +   +++  +      +R
Sbjct: 94  QGYVFYPQVNVVSEMADMMSASRSFETNVEVLNSVKSMQQSVLR 137



 Score = 38.3 bits (87), Expect = 0.99,   Method: Composition-based stats.
 Identities = 16/96 (16%), Positives = 29/96 (30%), Gaps = 6/96 (6%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQK 55
             + I  +A  A   RL+T+A N++N ++        ++     FS V           
Sbjct: 4  NNIYRISGSAMTAQTIRLNTIASNLANAESPAASEATVYKARSPVFSAVYSPRSAAAPGG 63

Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA 91
          +         + +  GS          A      F 
Sbjct: 64 VGGAQVQVLDVVETGGSVQRYEPNHPLANPQGYVFY 99


>gi|163850061|ref|YP_001638104.1| flagellar basal body rod protein FlgC [Methylobacterium extorquens
           PA1]
 gi|218528664|ref|YP_002419480.1| flagellar basal body rod protein FlgC [Methylobacterium
           chloromethanicum CM4]
 gi|240137195|ref|YP_002961664.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Methylobacterium extorquens AM1]
 gi|254559207|ref|YP_003066302.1| cell-proximal portion of basal-body rod biosynthesis protein
           [Methylobacterium extorquens DM4]
 gi|163661666|gb|ABY29033.1| flagellar basal-body rod protein FlgC [Methylobacterium extorquens
           PA1]
 gi|218520967|gb|ACK81552.1| flagellar basal-body rod protein FlgC [Methylobacterium
           chloromethanicum CM4]
 gi|240007161|gb|ACS38387.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Methylobacterium extorquens AM1]
 gi|254266485|emb|CAX22249.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
           [Methylobacterium extorquens DM4]
          Length = 138

 Score = 43.7 bits (101), Expect = 0.025,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 16/42 (38%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
            N N + EM  M    + + +   +I +    +   I  + S
Sbjct: 97  PNVNMLVEMADMREANRSYEANLQVIKQARAMVASVIDLLKS 138



 Score = 37.2 bits (84), Expect = 2.1,   Method: Composition-based stats.
 Identities = 10/72 (13%), Positives = 22/72 (30%), Gaps = 7/72 (9%)

Query: 8  GLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQKISFVA 60
            A   A   R+  V++N++N  + G       +    V F   +         ++  + 
Sbjct: 12 ASAGLEAQSLRMRVVSENLANAQSTGATPGADPYARKTVTFRAELDRAAGVASVRLREIG 71

Query: 61 SGKEYLSKEVGS 72
          +       E   
Sbjct: 72 TDNAPFRTEHDP 83


>gi|146305256|ref|YP_001185721.1| flagellar hook-associated protein FlgK [Pseudomonas mendocina
          ymp]
 gi|145573457|gb|ABP82989.1| flagellar hook-associated protein FlgK [Pseudomonas mendocina
          ymp]
          Length = 455

 Score = 43.3 bits (100), Expect = 0.026,   Method: Composition-based stats.
 Identities = 9/66 (13%), Positives = 24/66 (36%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66
          I  +   A +  L++   N++N +T GF  ++     + G     +   +  ++  +   
Sbjct: 7  IAYSGVRASQVALASTGQNIANVNTPGFSRLQTITGSLAGQGGLSVGGGVEVISIRRMTN 66

Query: 67 SKEVGS 72
                
Sbjct: 67 DFHNQQ 72



 Score = 41.4 bits (95), Expect = 0.12,   Method: Composition-based stats.
 Identities = 4/37 (10%), Positives = 13/37 (35%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  +   E   ++   Q + +   +I    +   + +
Sbjct: 416 SAVSLDEEAVNLMTYQQAYQANMKVISTANQLFDDML 452


>gi|330953732|gb|EGH53992.1| flagellar hook-associated protein FlgK [Pseudomonas syringae Cit
          7]
          Length = 686

 Score = 43.3 bits (100), Expect = 0.026,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 35/97 (36%), Gaps = 1/97 (1%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           +  +IGL+   A    ++T+ +N +N DT G+   +V  +     I            +
Sbjct: 1  MSLISIGLSGINASSAAINTIGNNTANVDTAGYSRQQVL-TTASAQIALGQGVGYIGTGT 59

Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98
              + +   S++ T  +   AL  DA          
Sbjct: 60 TLSDVRRIYNSYLDTQLQSSTALSADAVAYSGQASKT 96


>gi|313650475|gb|EFS14882.1| flagellar basal-body rod protein flgC [Shigella flexneri 2a str.
           2457T]
 gi|332092840|gb|EGI97908.1| flagellar basal-body rod protein flgC [Shigella dysenteriae 155-74]
 gi|332758233|gb|EGJ88556.1| flagellar basal-body rod protein flgC [Shigella flexneri 4343-70]
 gi|332759610|gb|EGJ89915.1| flagellar basal-body rod protein flgC [Shigella flexneri 2747-71]
 gi|332761419|gb|EGJ91703.1| flagellar basal-body rod protein flgC [Shigella flexneri K-671]
 gi|332767681|gb|EGJ97874.1| hypothetical protein SF293071_1335 [Shigella flexneri 2930-71]
 gi|333004883|gb|EGK24403.1| flagellar basal-body rod protein flgC [Shigella flexneri VA-6]
 gi|333005580|gb|EGK25098.1| flagellar basal-body rod protein flgC [Shigella flexneri K-218]
 gi|333008276|gb|EGK27750.1| flagellar basal-body rod protein flgC [Shigella flexneri K-272]
 gi|333019432|gb|EGK38715.1| flagellar basal-body rod protein flgC [Shigella flexneri K-304]
 gi|333019766|gb|EGK39038.1| flagellar basal-body rod protein flgC [Shigella flexneri K-227]
          Length = 42

 Score = 43.3 bits (100), Expect = 0.026,   Method: Composition-based stats.
 Identities = 5/39 (12%), Positives = 18/39 (46%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             N + + EM   +  ++ + +   +++  +  ML+ + 
Sbjct: 1   MPNVDVVGEMVNTMSASRSYQANVEVLNTVKSMMLKTLT 39


>gi|292487945|ref|YP_003530820.1| flagellar hook-filament junction protein 1 [Erwinia amylovora
          CFBP1430]
 gi|292899164|ref|YP_003538533.1| flagellar hook-associated protein 1 [Erwinia amylovora ATCC
          49946]
 gi|291199012|emb|CBJ46123.1| flagellar hook-associated protein 1 [Erwinia amylovora ATCC
          49946]
 gi|291553367|emb|CBA20412.1| Flagellar hook-filament junction protein 1 [Erwinia amylovora
          CFBP1430]
 gi|312172066|emb|CBX80323.1| Flagellar hook-filament junction protein 1 [Erwinia amylovora
          ATCC BAA-2158]
          Length = 551

 Score = 43.3 bits (100), Expect = 0.026,   Method: Composition-based stats.
 Identities = 8/51 (15%), Positives = 19/51 (37%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51
          M    N  ++   A    L+T ++N++N    G+       ++    +   
Sbjct: 1  MSNLINTAMSGLSASSAALNTTSNNITNYAVTGYSRQTTVLNQSASTLSGG 51


>gi|196033444|ref|ZP_03100856.1| flagellar basal-body rod protein FlgC [Bacillus cereus W]
 gi|195993878|gb|EDX57834.1| flagellar basal-body rod protein FlgC [Bacillus cereus W]
          Length = 137

 Score = 43.3 bits (100), Expect = 0.026,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 22/40 (55%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           G++   N +   EM  ++   + + + T++++ N+K + +
Sbjct: 91  GYVRYPNIDVTAEMTNVMVAQKMYEANTSVLNANKKMLDK 130



 Score = 42.2 bits (97), Expect = 0.072,   Method: Composition-based stats.
 Identities = 5/33 (15%), Positives = 13/33 (39%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG 33
          M  + N   +      + +   ++N+ N +T  
Sbjct: 1  MFQAINASGSGLTTARKWMEVTSNNIVNANTTA 33


>gi|326402283|ref|YP_004282364.1| flagellar hook-associated protein [Acidiphilium multivorum
          AIU301]
 gi|325049144|dbj|BAJ79482.1| flagellar hook-associated protein [Acidiphilium multivorum
          AIU301]
          Length = 485

 Score = 43.3 bits (100), Expect = 0.026,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 21/49 (42%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
             I  +   A++Q+L+ V+ N++N +T G+       S      +   
Sbjct: 6  GLAIASSGLSAIDQQLAVVSQNIANANTSGYSVETANLSSATAGGQGSG 54


>gi|307731366|ref|YP_003908590.1| flagellar basal-body rod protein FlgB [Burkholderia sp. CCGE1003]
 gi|307585901|gb|ADN59299.1| flagellar basal-body rod protein FlgB [Burkholderia sp. CCGE1003]
          Length = 163

 Score = 43.3 bits (100), Expect = 0.027,   Method: Composition-based stats.
 Identities = 11/73 (15%), Positives = 23/73 (31%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A      R   ++ N++N DT G++   V F+  +              ++       + 
Sbjct: 15 ALDVRAYRQELLSSNIANADTPGYKARDVDFASSLAGALKKTGAAGHTASNTATLAMAQP 74

Query: 71 GSFISTGTELDFA 83
              S  +    A
Sbjct: 75 AGVTSGMSMAATA 87


>gi|126653752|ref|ZP_01725670.1| flagellar basal-body rod protein B [Bacillus sp. B14905]
 gi|126589716|gb|EAZ83852.1| flagellar basal-body rod protein B [Bacillus sp. B14905]
          Length = 130

 Score = 43.3 bits (100), Expect = 0.027,   Method: Composition-based stats.
 Identities = 11/78 (14%), Positives = 29/78 (37%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69
                     T+A+N++N DT  ++   V F +++   K+             ++  ++
Sbjct: 13 NGLSYATLNHKTIANNIANVDTPNYKAKNVSFKDMLAEQKDISISAYRTDNRHYDFTIRQ 72

Query: 70 VGSFISTGTELDFALEGD 87
              ++    L +   G+
Sbjct: 73 STPGVNNIENLRYRNNGN 90


>gi|89056689|ref|YP_512140.1| flagellar basal body rod protein FlgB [Jannaschia sp. CCS1]
 gi|88866238|gb|ABD57115.1| flagellar basal-body rod protein FlgB [Jannaschia sp. CCS1]
          Length = 117

 Score = 43.3 bits (100), Expect = 0.027,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 30/111 (27%), Gaps = 2/111 (1%)

Query: 5   FNIGLAAQLALE-QRLSTVADNMSNTDTVGFR-TIKVKFSEVVGAIKNDIDQKISFVASG 62
                +        R + VA N++N DT G+R      F +    +  +  +  + V   
Sbjct: 7   IFQLASGLARHSASRQAVVAQNIANADTPGYRARDVADFQQTWRNMTAEAREGRTEVPMR 66

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113
                       ++ +     L G       S    +         T  G 
Sbjct: 67  VIDARTPASPNGNSVSLEFEMLRGIEAQRAHSRALRVYGSAMTILRTSIGR 117


>gi|34556699|ref|NP_906514.1| flagellar hook-associated protein FlgK [Wolinella succinogenes DSM
           1740]
 gi|34482413|emb|CAE09414.1| FLAGELLAR HOOK-ASSOCIATED PROTEIN 1 [Wolinella succinogenes]
          Length = 609

 Score = 43.3 bits (100), Expect = 0.027,   Method: Composition-based stats.
 Identities = 34/228 (14%), Positives = 68/228 (29%), Gaps = 20/228 (8%)

Query: 14  ALEQRLSTVADNMSNTDT--VGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
           AL      V  N  N +T   G       F +   A  N+  +  +F    K        
Sbjct: 395 ALTTMQDIV--NQLNANTDDNGDGNAINDFDDNFYATYNN--ETKTFQILPKNPSDGIYI 450

Query: 72  SFISTGTELDFALEGDAWFALESPRGIILT-RDGRFKVTDDGSLVSASGKYPVLDMASVP 130
           S+   GT    AL  + +F   S + I L  R         G   +  G   V +     
Sbjct: 451 SYQDNGTNFAGALGINRFFDGNSAQNINLAMRYRDDPTLIRGYREAVEGNIVVANKMQQL 510

Query: 131 IQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS 190
                    +N  +  E       + T              +  +  +       ++   
Sbjct: 511 QYNKVNFFDYNGNQYNETLADFFKLVTT-------------KIATDTADAKTSNEIKKAV 557

Query: 191 GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
             +VK+ ++  S  ++  E+  +I     + +   ++   +K +   +
Sbjct: 558 LTSVKQEYVSISEVSTDEELTNLIRFQGGYTANAKVVATLDKMLDTLL 605



 Score = 35.2 bits (79), Expect = 8.4,   Method: Composition-based stats.
 Identities = 5/28 (17%), Positives = 12/28 (42%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTD 30
          +S N+        +  +S   +N++N  
Sbjct: 6  SSLNLAYTGLQTHQVMVSVTGNNIANAS 33


>gi|289679013|ref|ZP_06499903.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
          syringae FF5]
          Length = 560

 Score = 43.3 bits (100), Expect = 0.027,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 21/38 (55%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39
           +  +IGL+   A    ++T+ +N +N DT G+   +V
Sbjct: 1  MSLISIGLSGINASSAAINTIGNNTANVDTAGYSRQQV 38


>gi|289433989|ref|YP_003463861.1| flagellar basal-body rod protein FlgC [Listeria seeligeri serovar
           1/2b str. SLCC3954]
 gi|315301963|ref|ZP_07872959.1| flagellar basal-body rod protein FlgC [Listeria ivanovii FSL
           F6-596]
 gi|289170233|emb|CBH26773.1| flagellar basal-body rod protein FlgC [Listeria seeligeri serovar
           1/2b str. SLCC3954]
 gi|313629670|gb|EFR97807.1| flagellar basal-body rod protein FlgC [Listeria ivanovii FSL
           F6-596]
 gi|313639044|gb|EFS04033.1| flagellar basal-body rod protein FlgC [Listeria seeligeri FSL
           S4-171]
          Length = 136

 Score = 43.3 bits (100), Expect = 0.027,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 21/40 (52%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           G++  +N +   EM  ++   + + + T+ +  NEK M +
Sbjct: 90  GYVNYANVDMTAEMTNLMVGQKMYAANTSALQANEKMMEK 129



 Score = 38.3 bits (87), Expect = 0.91,   Method: Composition-based stats.
 Identities = 8/30 (26%), Positives = 15/30 (50%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTD 30
          M    N   +A  A +Q +   ++N++N D
Sbjct: 1  MFEGINTSGSALNAAKQWMEVSSNNIANAD 30


>gi|89075491|ref|ZP_01161902.1| flagellar basal body protein [Photobacterium sp. SKA34]
 gi|89048763|gb|EAR54334.1| flagellar basal body protein [Photobacterium sp. SKA34]
          Length = 131

 Score = 43.3 bits (100), Expect = 0.027,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 22/38 (57%)

Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
          E+R  T+A N+SN +T G++   + FS  + A  +  D
Sbjct: 20 EKRAETLASNISNANTPGYKAKDLDFSRALKAATSGAD 57


>gi|219670132|ref|YP_002460567.1| flagellar basal-body rod protein FlgB [Desulfitobacterium
          hafniense DCB-2]
 gi|219540392|gb|ACL22131.1| flagellar basal-body rod protein FlgB [Desulfitobacterium
          hafniense DCB-2]
          Length = 133

 Score = 43.3 bits (100), Expect = 0.027,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 24/55 (43%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65
          +  A   R   +A+N++N DT  F+   V F  ++G        ++    + + +
Sbjct: 16 SLDASSLRYKVLANNVANVDTPDFKRSDVDFDLLLGEAMGQTGGELPLKVTSERH 70


>gi|188579865|ref|YP_001923310.1| flagellar basal body rod protein FlgC [Methylobacterium populi
           BJ001]
 gi|179343363|gb|ACB78775.1| flagellar basal-body rod protein FlgC [Methylobacterium populi
           BJ001]
          Length = 138

 Score = 43.3 bits (100), Expect = 0.027,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 19/47 (40%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           G ++  N N + EM  M    + + +   +I +    +   I  + S
Sbjct: 92  GNVKLPNVNMLVEMADMREANRSYEANLQVIKQARAMVASVIDLLKS 138



 Score = 37.5 bits (85), Expect = 1.5,   Method: Composition-based stats.
 Identities = 10/100 (10%), Positives = 29/100 (29%), Gaps = 8/100 (8%)

Query: 8   GLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQKISFVA 60
             A   A   R+  V++N++N  + G       +    V F   +         ++  + 
Sbjct: 12  ASAGLEAQSLRMRVVSENLANAQSTGASPGADPYARKTVTFRAELDRAAGIASVRLREIG 71

Query: 61  S-GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
           +    + ++   +  +     +  L         +     
Sbjct: 72  TDDAPFRTEHDPANPAADENGNVKLPNVNMLVEMADMREA 111


>gi|83815671|ref|YP_446718.1| flagellar basal-body rod protein FlgC [Salinibacter ruber DSM
           13855]
 gi|294508653|ref|YP_003572712.1| flagellar basal-body rod protein flgC [Salinibacter ruber M8]
 gi|83757065|gb|ABC45178.1| flagellar basal-body rod protein FlgC [Salinibacter ruber DSM
           13855]
 gi|294344982|emb|CBH25760.1| Flagellar basal-body rod protein flgC [Salinibacter ruber M8]
          Length = 166

 Score = 43.3 bits (100), Expect = 0.027,   Method: Composition-based stats.
 Identities = 5/41 (12%), Positives = 16/41 (39%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
           G++   + N   EM +M    + + +  + ++  +      
Sbjct: 123 GYVHYPDVNVAQEMARMTSANRVYEANLSAVEATKSMAQRT 163


>gi|218506433|ref|ZP_03504311.1| flagellar basal body rod protein FlgC [Rhizobium etli Brasil 5]
          Length = 102

 Score = 43.3 bits (100), Expect = 0.028,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 28/80 (35%), Gaps = 7/80 (8%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNT----DTVG---FRTIKVKFSEVVGAIKNDIDQKI 56
          +  I  +   A   RL  V++N++N     DT G   +R   + F + +  +       +
Sbjct: 7  AMKIAGSGLEAQSTRLRIVSENIANARSTGDTPGADPYRRKTITFGQQMDHVSGVETVNV 66

Query: 57 SFVASGKEYLSKEVGSFIST 76
            V   +   S E       
Sbjct: 67 KKVGVDEGDFSTEFDPSNPA 86


>gi|57169005|ref|ZP_00368134.1| flagellar hook-associated protein 1 (HAP1) (flgK) [Campylobacter
          coli RM2228]
 gi|305432258|ref|ZP_07401421.1| flagellar hook-associated protein FlgK [Campylobacter coli JV20]
 gi|57019671|gb|EAL56360.1| flagellar hook-associated protein 1 (HAP1) (flgK) [Campylobacter
          coli RM2228]
 gi|304444606|gb|EFM37256.1| flagellar hook-associated protein FlgK [Campylobacter coli JV20]
          Length = 608

 Score = 43.3 bits (100), Expect = 0.028,   Method: Composition-based stats.
 Identities = 11/78 (14%), Positives = 23/78 (29%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
             G+    A E +++T  +N+SN +   +   +V  +         +            
Sbjct: 7  LYTGVTGLKASEVQIATTGNNISNANATFYTRQRVVQTTNGYITTGGVQVGTGTTVESIV 66

Query: 65 YLSKEVGSFISTGTELDF 82
           L  E   +   G     
Sbjct: 67 RLHDEYSYYKLKGASTQL 84



 Score = 39.9 bits (91), Expect = 0.34,   Method: Composition-based stats.
 Identities = 7/70 (10%), Positives = 21/70 (30%)

Query: 169 FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228
              +  S    N            +V   +   S  N+  E+  +I     + +   ++ 
Sbjct: 535 LTGKIGSDGENNNVVNASNQTLYNSVYSEYQSKSGVNTNEELAALIQWQSSYGAAAKIVT 594

Query: 229 ENEKSMLEAI 238
             ++ +   +
Sbjct: 595 TVDQMLDTLL 604


>gi|237751238|ref|ZP_04581718.1| flagellar basal-body rod protein [Helicobacter bilis ATCC 43879]
 gi|229372604|gb|EEO22995.1| flagellar basal-body rod protein [Helicobacter bilis ATCC 43879]
          Length = 132

 Score = 43.3 bits (100), Expect = 0.028,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 20/43 (46%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          +A      R   +A NM+N DT  +R   V F +++    + I
Sbjct: 3  SALDYRSLRQDLIASNMANVDTPFYRPRDVHFEDMLAEKASQI 45


>gi|188534164|ref|YP_001907961.1| flagellar hook-associated protein FlgK [Erwinia tasmaniensis
          Et1/99]
 gi|188029206|emb|CAO97078.1| Flagellar hook-filament junction protein 1 [Erwinia tasmaniensis
          Et1/99]
          Length = 551

 Score = 43.3 bits (100), Expect = 0.028,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 15/40 (37%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
          M    N  +    A    L+T ++N++N    G+      
Sbjct: 1  MANLINTAMTGLNAASAALNTTSNNITNYAVTGYSRQTTV 40


>gi|90579916|ref|ZP_01235724.1| flagellar hook-associated protein [Vibrio angustum S14]
 gi|90438801|gb|EAS63984.1| flagellar hook-associated protein [Vibrio angustum S14]
          Length = 778

 Score = 43.3 bits (100), Expect = 0.028,   Method: Composition-based stats.
 Identities = 8/47 (17%), Positives = 17/47 (36%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51
            +G++     +++L   + N+SN  T G+    V            
Sbjct: 6  MQLGISGLRTSQKQLDVTSHNISNVHTAGYSRQVVDQKAADAQWSGG 52


>gi|302185576|ref|ZP_07262249.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
          syringae 642]
          Length = 686

 Score = 43.3 bits (100), Expect = 0.028,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 21/38 (55%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39
           +  +IGL+   A    ++T+ +N +N DT G+   +V
Sbjct: 1  MSLISIGLSGINASSAAINTIGNNTANVDTAGYSRQQV 38


>gi|228938858|ref|ZP_04101458.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228971739|ref|ZP_04132360.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228978348|ref|ZP_04138725.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           Bt407]
 gi|228781365|gb|EEM29566.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           Bt407]
 gi|228787829|gb|EEM35787.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228820707|gb|EEM66732.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|326939358|gb|AEA15254.1| flagellar basal body rod protein FlgC [Bacillus thuringiensis
           serovar chinensis CT-43]
          Length = 137

 Score = 43.3 bits (100), Expect = 0.028,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 22/40 (55%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           G++   N +   EM  ++   + + + T++++ N+K + +
Sbjct: 91  GYVRYPNIDVTAEMTNVMVTQKMYEANTSVLNANKKMLDK 130



 Score = 42.2 bits (97), Expect = 0.058,   Method: Composition-based stats.
 Identities = 5/33 (15%), Positives = 13/33 (39%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG 33
          M  + N   +      + +   ++N+ N +T  
Sbjct: 1  MFQAINASGSGLTTARKWMEVTSNNIVNANTTA 33


>gi|296127541|ref|YP_003634793.1| flagellar basal-body rod protein FlgB [Brachyspira murdochii DSM
          12563]
 gi|296019357|gb|ADG72594.1| flagellar basal-body rod protein FlgB [Brachyspira murdochii DSM
          12563]
          Length = 142

 Score = 43.3 bits (100), Expect = 0.028,   Method: Composition-based stats.
 Identities = 9/66 (13%), Positives = 15/66 (22%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
                R   +ADN++N  T  F+   V F   +    +                     
Sbjct: 20 LNVYGLRAEVIADNIANVSTPNFKRSDVTFEYQLARALDSEKYDGMEAKRTDSRHFPFHM 79

Query: 72 SFISTG 77
                
Sbjct: 80 PMNYQD 85


>gi|205375049|ref|ZP_03227840.1| flagellar hook-associated protein FlgK [Bacillus coahuilensis m4-4]
          Length = 511

 Score = 43.3 bits (100), Expect = 0.028,   Method: Composition-based stats.
 Identities = 9/51 (17%), Positives = 20/51 (39%), Gaps = 5/51 (9%)

Query: 197 GFLED-----SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G +E+     S  +   EM  M+     +N+   +I   ++ +   I  + 
Sbjct: 457 GAVENRRMSTSQVSLDEEMTNMVQYQHAYNAAARMISLTDELLDTIINGMG 507



 Score = 42.9 bits (99), Expect = 0.037,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 16/40 (40%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
                 A    +  L T + N++N +T G+   +V  S 
Sbjct: 6  GLETAKRAMNTSQSALYTTSHNIANANTPGYSRQQVSMST 45


>gi|209547926|ref|YP_002279843.1| flagellar basal body rod protein FlgC [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209533682|gb|ACI53617.1| flagellar basal-body rod protein FlgC [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 138

 Score = 43.3 bits (100), Expect = 0.028,   Method: Composition-based stats.
 Identities = 9/49 (18%), Positives = 21/49 (42%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           ++G ++  N N + EM  M    + +++    I +    +   I  + S
Sbjct: 89  QKGVVKLPNVNILVEMADMREANRSYDANLQTIKQTRDLISSTIDLLKS 137



 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 22/54 (40%), Gaps = 7/54 (12%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNT----DTVG---FRTIKVKFSEVVGAIKN 50
          +  I  +   A   RL  V++N++N     DT G   +R   + F + +     
Sbjct: 7  AMKIAGSGLEAQSTRLRIVSENIANARSTGDTPGADPYRRKTITFGQQMDRASG 60


>gi|90579905|ref|ZP_01235713.1| flagellar basal body protein [Vibrio angustum S14]
 gi|90438790|gb|EAS63973.1| flagellar basal body protein [Vibrio angustum S14]
          Length = 131

 Score = 43.3 bits (100), Expect = 0.029,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 22/38 (57%)

Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
          E+R  T+A N+SN +T G++   + FS  + A  +  D
Sbjct: 20 EKRAETLASNISNANTPGYKAKDLDFSRALKAATSGAD 57


>gi|89902474|ref|YP_524945.1| flagellar basal-body rod protein FlgB [Rhodoferax ferrireducens
          T118]
 gi|89347211|gb|ABD71414.1| flagellar basal-body rod protein FlgB [Rhodoferax ferrireducens
          T118]
          Length = 150

 Score = 43.3 bits (100), Expect = 0.029,   Method: Composition-based stats.
 Identities = 11/77 (14%), Positives = 23/77 (29%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M +  +    A +   +R   +A N++N DT G+    + F + +               
Sbjct: 5  MTSGLDFQAKALVLRAERQRVIASNIANADTPGYVARDLNFKDAMLQATGADSSSGLRTG 64

Query: 61 SGKEYLSKEVGSFISTG 77
          +         G      
Sbjct: 65 NSNSQGGGANGMTHPHH 81


>gi|229096230|ref|ZP_04227203.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock3-29]
 gi|229102343|ref|ZP_04233051.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock3-28]
 gi|229115185|ref|ZP_04244595.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock1-3]
 gi|228668325|gb|EEL23757.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock1-3]
 gi|228680990|gb|EEL35159.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock3-28]
 gi|228687190|gb|EEL41095.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock3-29]
          Length = 137

 Score = 43.3 bits (100), Expect = 0.029,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 22/40 (55%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           G++   N +   EM  ++   + + + T++++ N+K + +
Sbjct: 91  GYVRYPNIDVTAEMTNVMVAQKMYEANTSVLNANKKMLDK 130



 Score = 41.8 bits (96), Expect = 0.077,   Method: Composition-based stats.
 Identities = 5/33 (15%), Positives = 13/33 (39%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG 33
          M  + N   +      + +   ++N+ N +T  
Sbjct: 1  MFQAMNASGSGLTTARKWMEVTSNNIVNANTTA 33


>gi|162147480|ref|YP_001601941.1| flagellar hook-associated protein [Gluconacetobacter
          diazotrophicus PAl 5]
 gi|161786057|emb|CAP55639.1| putative flagellar hook-associated protein [Gluconacetobacter
          diazotrophicus PAl 5]
          Length = 503

 Score = 43.3 bits (100), Expect = 0.029,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 24/48 (50%), Gaps = 2/48 (4%)

Query: 1  MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46
          M   +S +   +    +E +L  +++N+SN+ T G+ +   + S  V 
Sbjct: 1  MDLLSSLSTATSGLNGIEYQLGVLSNNVSNSSTTGYVSETAEVSSAVA 48


>gi|149202210|ref|ZP_01879183.1| flagellar basal-body rod protein FlgC [Roseovarius sp. TM1035]
 gi|149144308|gb|EDM32339.1| flagellar basal-body rod protein FlgC [Roseovarius sp. TM1035]
          Length = 138

 Score = 43.3 bits (100), Expect = 0.029,   Method: Composition-based stats.
 Identities = 17/88 (19%), Positives = 31/88 (35%), Gaps = 7/88 (7%)

Query: 1  MQTSFN-IGLAAQLALEQRLSTVADNMSN---TDTV---GFRTIKVKFSEVVGAIKNDID 53
          M  +   +  +A  A   RL+TVA NM+N     T     +R ++  F  +         
Sbjct: 2  MIKNIFDVASSAMSAQMVRLNTVASNMANAQAVSTTKEEAYRPLRPVFETIYADQTGQSG 61

Query: 54 QKISFVASGKEYLSKEVGSFISTGTELD 81
             + V    +   + V ++       D
Sbjct: 62 LSTTHVTDVVQLDREPVRAYRPDHPMAD 89



 Score = 37.5 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 20/42 (47%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           GF+ +S  N   EM +M+  ++++ ++   +      M   +
Sbjct: 92  GFVYESVVNPDEEMVEMVEASRQYQNVLETVSTLRTLMARTV 133


>gi|94968683|ref|YP_590731.1| flagellar basal-body rod protein FlgB [Candidatus Koribacter
          versatilis Ellin345]
 gi|94550733|gb|ABF40657.1| flagellar basal-body rod protein FlgB [Candidatus Koribacter
          versatilis Ellin345]
          Length = 118

 Score = 43.3 bits (100), Expect = 0.029,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 25/72 (34%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
           N+   A      R   +A+NM+N DT G+ T  + F+  +  +  +         + + 
Sbjct: 9  LNVAERALDVSAARQRVIANNMANVDTPGYHTRDIDFAGQLRQMLGEASGGSQTTLASRN 68

Query: 65 YLSKEVGSFIST 76
                    + 
Sbjct: 69 VPGLVERPDGNN 80


>gi|86750925|ref|YP_487421.1| flagellar hook-associated protein [Rhodopseudomonas palustris HaA2]
 gi|86573953|gb|ABD08510.1| Flagellar hook-associated protein [Rhodopseudomonas palustris HaA2]
          Length = 623

 Score = 43.3 bits (100), Expect = 0.029,   Method: Composition-based stats.
 Identities = 14/121 (11%), Positives = 37/121 (30%)

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
            P     +       K    +       +  G   A          Q FV ++ S     
Sbjct: 503 PPTAAGDTTRPDFITKQLTSSKYLYSATTGIGSNAAPYNGTLESFLQQFVSQQGSNAQAA 562

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
                 + +   T+++ +  +S  N   EM  ++ L   +++   ++    +     ++ 
Sbjct: 563 TQLASGQSVVLNTLQQKYATNSGVNMDEEMAHLLSLQNAYSANARVMSTVNQMYQTLMQA 622

Query: 241 I 241
           +
Sbjct: 623 M 623



 Score = 40.6 bits (93), Expect = 0.19,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 21/49 (42%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          + +I +A   A +  +S V+ N++N +T G+    V     +       
Sbjct: 6  ALSIAMAGLRANQASMSLVSSNVANAETPGYVRKTVNQVTTLSGPSGSG 54


>gi|148259129|ref|YP_001233256.1| flagellar hook-associated protein FlgK [Acidiphilium cryptum
          JF-5]
 gi|146400810|gb|ABQ29337.1| flagellar hook-associated protein FlgK [Acidiphilium cryptum
          JF-5]
          Length = 485

 Score = 43.3 bits (100), Expect = 0.029,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 21/49 (42%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
             I  +   A++Q+L+ V+ N++N +T G+       S      +   
Sbjct: 6  GLAIASSGLSAIDQQLAVVSQNIANANTSGYSVETANLSAATAGGQGSG 54


>gi|332298485|ref|YP_004440407.1| flagellar hook-associated protein FlgK [Treponema brennaborense DSM
           12168]
 gi|332181588|gb|AEE17276.1| flagellar hook-associated protein FlgK [Treponema brennaborense DSM
           12168]
          Length = 629

 Score = 43.3 bits (100), Expect = 0.029,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 15/41 (36%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E+  +I     +N+    I   ++ +   I  + 
Sbjct: 588 SGVNVDEELADIIKFQHGYNAAAKFITVMDELLDTVINRLG 628



 Score = 36.0 bits (81), Expect = 4.5,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 18/34 (52%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44
          + +A  Q +ST   N+SN  T G+   +V+  + 
Sbjct: 14 SLMAQSQSISTAGHNISNASTEGYSRQRVQLRQF 47


>gi|192292820|ref|YP_001993425.1| flagellar hook-associated protein FlgK [Rhodopseudomonas palustris
           TIE-1]
 gi|192286569|gb|ACF02950.1| flagellar hook-associated protein FlgK [Rhodopseudomonas palustris
           TIE-1]
          Length = 623

 Score = 43.3 bits (100), Expect = 0.029,   Method: Composition-based stats.
 Identities = 14/93 (15%), Positives = 35/93 (37%)

Query: 149 SQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMY 208
           +  G   A      +   Q FV ++ S  +     +  +++   T+++ F   S  N   
Sbjct: 531 TGIGSDAAPYKGTLLSYLQQFVSQQGSNAAAAQQLSEGQNVVLNTLQQKFSTSSGVNMDE 590

Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           EM  ++ L   + +   ++    +     ++ I
Sbjct: 591 EMAHLLSLQNAYAANARVMSTINQMYQSLMQAI 623



 Score = 39.9 bits (91), Expect = 0.29,   Method: Composition-based stats.
 Identities = 13/92 (14%), Positives = 31/92 (33%), Gaps = 3/92 (3%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
          +  I +A     +  +S V+ N++N +T G+    V  S V      +    +  V   +
Sbjct: 6  ALAIAMAGLRVNQATMSLVSSNVANAETPGYVRKTVNQSAV---NAGETGTSVKVVGVDR 62

Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESP 95
          +     +    +  +   +A     +      
Sbjct: 63 QLDDYILAQLRTETSGGAYASLRSDFLKQLQG 94


>gi|296283243|ref|ZP_06861241.1| flagellar basal body rod protein FlgB [Citromicrobium
          bathyomarinum JL354]
          Length = 124

 Score = 43.3 bits (100), Expect = 0.029,   Method: Composition-based stats.
 Identities = 10/35 (28%), Positives = 17/35 (48%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46
             L  R   +A N++N DT G++  +V+     G
Sbjct: 1  MRHLSDRQQVIAQNIANGDTPGYKAREVEAPSFAG 35


>gi|300024608|ref|YP_003757219.1| flagellar basal-body rod protein FlgC [Hyphomicrobium
          denitrificans ATCC 51888]
 gi|299526429|gb|ADJ24898.1| flagellar basal-body rod protein FlgC [Hyphomicrobium
          denitrificans ATCC 51888]
          Length = 139

 Score = 43.3 bits (100), Expect = 0.029,   Method: Composition-based stats.
 Identities = 9/51 (17%), Positives = 19/51 (37%), Gaps = 7/51 (13%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKN 50
             +   A   R+  V++N++N  T G       ++   + F  V+     
Sbjct: 11 SAASGLFAQSSRMRVVSENIANASTTGKTPGADPYQRKTISFQSVMDENAG 61



 Score = 42.5 bits (98), Expect = 0.048,   Method: Composition-based stats.
 Identities = 14/101 (13%), Positives = 34/101 (33%)

Query: 143 GEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDS 202
              G    + K I+   +   +     V+ +          T     +      G ++  
Sbjct: 38  KTPGADPYQRKTISFQSVMDENAGADLVQVDKISHDETPFETQYMPGNAAADSNGMVKMP 97

Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           N N + E+  M   ++ + + T +I +  + +   I  + S
Sbjct: 98  NVNMLVELADMREASRSYTANTQVIKQVRELVSMTIDLMRS 138


>gi|168334477|ref|ZP_02692648.1| Flagellar basal body protein [Epulopiscium sp. 'N.t. morphotype
          B']
          Length = 120

 Score = 43.3 bits (100), Expect = 0.029,   Method: Composition-based stats.
 Identities = 14/88 (15%), Positives = 35/88 (39%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M  + +I   A  A   R   + +N++N DTVG++   V+F  ++        +K   + 
Sbjct: 1  MFENIDITKKALDASMLRYQHLTNNIANIDTVGYKRTDVEFGSILARELQMNGRKNIDLN 60

Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDA 88
            +  +  +     +     +  ++ + 
Sbjct: 61 RIQPRVYYDNAGARTRLDGNNIDIDKEM 88


>gi|23013710|ref|ZP_00053576.1| COG4786: Flagellar basal body rod protein [Magnetospirillum
          magnetotacticum MS-1]
          Length = 100

 Score = 43.3 bits (100), Expect = 0.029,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 18/40 (45%), Gaps = 2/40 (5%)

Query: 1  MQTSFN--IGLAAQLALEQRLSTVADNMSNTDTVGFRTIK 38
          M +S      L+      +   T ADN++N  T G++  +
Sbjct: 1  MISSIASTTLLSGLATQSRVAQTAADNIANVTTPGYQAER 40


>gi|330445345|ref|ZP_08308997.1| flagellar basal-body rod protein FlgB [Photobacterium leiognathi
          subsp. mandapamensis svers.1.1.]
 gi|328489536|dbj|GAA03494.1| flagellar basal-body rod protein FlgB [Photobacterium leiognathi
          subsp. mandapamensis svers.1.1.]
          Length = 131

 Score = 43.3 bits (100), Expect = 0.030,   Method: Composition-based stats.
 Identities = 9/37 (24%), Positives = 20/37 (54%)

Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
          +R  T+A N++N +T G++   + F   + A  +  +
Sbjct: 21 KRAETLASNIANANTPGYKAKDIDFQRALNAATSGAN 57


>gi|317492431|ref|ZP_07950860.1| flagellar basal-body rod protein FlgB [Enterobacteriaceae
          bacterium 9_2_54FAA]
 gi|316919770|gb|EFV41100.1| flagellar basal-body rod protein FlgB [Enterobacteriaceae
          bacterium 9_2_54FAA]
          Length = 149

 Score = 43.3 bits (100), Expect = 0.030,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 20/65 (30%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   +A N++N DT GF+   + FS  +           S V           
Sbjct: 27 ALNLRAQRQEILAANIANADTPGFQARDIDFSSQLTRAIEQGRVNGSGVELKTTSSRHIP 86

Query: 71 GSFIS 75
               
Sbjct: 87 AQSFQ 91


>gi|217034660|ref|ZP_03440065.1| hypothetical protein HP9810_901g7 [Helicobacter pylori 98-10]
 gi|216942868|gb|EEC22359.1| hypothetical protein HP9810_901g7 [Helicobacter pylori 98-10]
          Length = 606

 Score = 43.3 bits (100), Expect = 0.030,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 14/37 (37%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  +   EM  +I     + +   +I   ++ +   +
Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVISTIDRMIDTLL 602



 Score = 36.8 bits (83), Expect = 2.7,   Method: Composition-based stats.
 Identities = 6/29 (20%), Positives = 11/29 (37%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTD 30
           +S N       A +  +    +N+SN  
Sbjct: 5  LSSLNASYTGLQAHQSMVDVTGNNISNAS 33


>gi|89895708|ref|YP_519195.1| hypothetical protein DSY2962 [Desulfitobacterium hafniense Y51]
 gi|89335156|dbj|BAE84751.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 129

 Score = 43.3 bits (100), Expect = 0.030,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 24/55 (43%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65
          +  A   R   +A+N++N DT  F+   V F  ++G        ++    + + +
Sbjct: 12 SLDASSLRYKVLANNVANVDTPDFKRSDVDFDLLLGEAMGQTGGELPLKVTSERH 66


>gi|27378285|ref|NP_769814.1| flagellar basal-body rod protein [Bradyrhizobium japonicum USDA
          110]
 gi|27351432|dbj|BAC48439.1| flagellar basal-body rod protein [Bradyrhizobium japonicum USDA
          110]
          Length = 149

 Score = 43.3 bits (100), Expect = 0.030,   Method: Composition-based stats.
 Identities = 10/32 (31%), Positives = 16/32 (50%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG 33
           + F+I  +   A   R+S  A N++N  T G
Sbjct: 1  MSIFSIATSGLSAASLRVSVAASNIANISTTG 32



 Score = 40.6 bits (93), Expect = 0.18,   Method: Composition-based stats.
 Identities = 5/42 (11%), Positives = 15/42 (35%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G +   N +   E  +++     F +   +I    ++    +
Sbjct: 104 GLVAAPNVDLAGEFVELVTAKYSFIANAKVIQAYAETTESLL 145


>gi|317180851|dbj|BAJ58637.1| flagellar hook-associated protein FlgK [Helicobacter pylori F32]
          Length = 606

 Score = 43.3 bits (100), Expect = 0.030,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 14/37 (37%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  +   EM  +I     + +   +I   ++ +   +
Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVISTIDRMIDTLL 602



 Score = 36.8 bits (83), Expect = 2.7,   Method: Composition-based stats.
 Identities = 6/29 (20%), Positives = 11/29 (37%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTD 30
           +S N       A +  +    +N+SN  
Sbjct: 5  LSSLNASYTGLQAHQSMVDVTGNNISNAS 33


>gi|56695116|ref|YP_165463.1| flagellar hook-associated protein FlgK [Ruegeria pomeroyi DSS-3]
 gi|56676853|gb|AAV93519.1| flagellar hook-associated protein FlgK, putative [Ruegeria
          pomeroyi DSS-3]
          Length = 483

 Score = 43.3 bits (100), Expect = 0.030,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 22/56 (39%), Gaps = 3/56 (5%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFV 59
          + N  L+   A  +     +DN++N  T G+    +   EV G        +I  V
Sbjct: 6  ALNSALSGLTAASRATGVASDNIANALTPGYARRSL---EVAGNTIGGAGVRILGV 58



 Score = 36.8 bits (83), Expect = 3.0,   Method: Composition-based stats.
 Identities = 13/105 (12%), Positives = 35/105 (33%), Gaps = 1/105 (0%)

Query: 135 QKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTV 194
           Q+   F+       +       T  + +  +    + R     S           S   +
Sbjct: 379 QQINAFHQALTATRTPSDPRFGTGDMTANQVGAALLSRVAQNESLATERLTFASASRTEM 438

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           ++  LE    ++  E+  ++ + Q + +   +I+   + M   +R
Sbjct: 439 QKLELEQG-VDTDVELQMLMQIEQAYAANARMIETVGEMMDTLLR 482


>gi|300870978|ref|YP_003785849.1| flagellar basal body rod protein FlgB [Brachyspira pilosicoli
          95/1000]
 gi|300688677|gb|ADK31348.1| flagellar basal body rod protein, FlgB [Brachyspira pilosicoli
          95/1000]
          Length = 142

 Score = 43.3 bits (100), Expect = 0.031,   Method: Composition-based stats.
 Identities = 12/70 (17%), Positives = 25/70 (35%), Gaps = 1/70 (1%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFS-EVVGAIKNDIDQKISFVASGKEYLSKEV 70
                R   +ADN++N  T  F+   V F  ++  A+ ++    I    +   +    +
Sbjct: 20 LNVYGLRAEVIADNIANVSTPNFKRSDVTFEYQLARALDSEKYDGIEAKRTDPRHFPFNM 79

Query: 71 GSFISTGTEL 80
              S  +  
Sbjct: 80 PMDYSEVSPT 89


>gi|323527716|ref|YP_004229869.1| flagellar basal-body rod protein FlgB [Burkholderia sp. CCGE1001]
 gi|323384718|gb|ADX56809.1| flagellar basal-body rod protein FlgB [Burkholderia sp. CCGE1001]
          Length = 163

 Score = 43.3 bits (100), Expect = 0.031,   Method: Composition-based stats.
 Identities = 11/73 (15%), Positives = 23/73 (31%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A      R   ++ N++N DT G++   V F+  +              ++       + 
Sbjct: 15 ALDVRAYRQELLSSNIANADTPGYKARDVDFASSLAGALKKTGATGHAASNTAALPMAQP 74

Query: 71 GSFISTGTELDFA 83
              S  +    A
Sbjct: 75 AGVTSGMSMAATA 87


>gi|255022067|ref|ZP_05294073.1| flagellar basal-body rod protein FlgC [Acidithiobacillus caldus
           ATCC 51756]
 gi|254968553|gb|EET26109.1| flagellar basal-body rod protein FlgC [Acidithiobacillus caldus
           ATCC 51756]
          Length = 141

 Score = 43.3 bits (100), Expect = 0.031,   Method: Composition-based stats.
 Identities = 8/45 (17%), Positives = 20/45 (44%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           K G++  SN N +  M  M+  ++ +    T  +  +   ++ + 
Sbjct: 96  KAGYVRGSNVNPIESMVDMLSASRAYQDDVTAANVLKTIAMKTLS 140



 Score = 36.4 bits (82), Expect = 3.3,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 23/57 (40%), Gaps = 6/57 (10%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTD----TVG--FRTIKVKFSEVVGAIKNDI 52
            + ++  AA  A   RL  V  N++N +    + G  ++  +V F  V     +  
Sbjct: 9  INALSVTGAAMSAQNARLGAVVSNLANANSVTSSTGTPYKAREVVFEAVPDGTASGG 65


>gi|39936992|ref|NP_949268.1| flagellar hook-associated protein [Rhodopseudomonas palustris
           CGA009]
 gi|39650849|emb|CAE29372.1| possible flagellar hook-associated protein 1 FlgK [Rhodopseudomonas
           palustris CGA009]
          Length = 623

 Score = 43.3 bits (100), Expect = 0.031,   Method: Composition-based stats.
 Identities = 14/93 (15%), Positives = 35/93 (37%)

Query: 149 SQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMY 208
           +  G   A      +   Q FV ++ S  +     +  +++   T+++ F   S  N   
Sbjct: 531 TGIGSDAAPYKGTLLSYLQQFVSQQGSNAAAAQQLSEGQNVVLNTLQQKFSTSSGVNMDE 590

Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           EM  ++ L   + +   ++    +     ++ I
Sbjct: 591 EMAHLLSLQNAYAANARVMSTINQMYQSLMQAI 623



 Score = 39.9 bits (91), Expect = 0.31,   Method: Composition-based stats.
 Identities = 13/92 (14%), Positives = 31/92 (33%), Gaps = 3/92 (3%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
          +  I +A     +  +S V+ N++N +T G+    V  S V      +    +  V   +
Sbjct: 6  ALAIAMAGLRVNQATMSLVSSNVANAETPGYVRKTVNQSAV---NAGETGTSVKVVGVDR 62

Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESP 95
          +     +    +  +   +A     +      
Sbjct: 63 QLDDYILAQLRTETSGGAYASLRSDFLKQLQG 94


>gi|253997380|ref|YP_003049444.1| flagellar basal body rod protein [Methylotenera mobilis JLW8]
 gi|253984059|gb|ACT48917.1| flagellar basal body rod protein [Methylotenera mobilis JLW8]
          Length = 99

 Score = 43.3 bits (100), Expect = 0.031,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 27/77 (35%)

Query: 9  LAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSK 68
          L+   A + RL   A+N++N  T  F   +V  +++ G      D K +  A        
Sbjct: 7  LSGMNAAQARLDVAANNIANLSTDNFTRKEVVQADLPGGGTRVADIKSAAQAGSNLEADM 66

Query: 69 EVGSFISTGTELDFALE 85
                      + ++ 
Sbjct: 67 VEQLQARNTYMTNLSVF 83


>gi|239909138|ref|YP_002955880.1| flagellar basal-body rod protein FlgC [Desulfovibrio magneticus
           RS-1]
 gi|239799005|dbj|BAH77994.1| flagellar basal-body rod protein FlgC [Desulfovibrio magneticus
           RS-1]
          Length = 147

 Score = 43.3 bits (100), Expect = 0.031,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 20/42 (47%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   + N + EM  MI   + + + ++ I   +    +A+
Sbjct: 101 GYVAYPDINVVEEMANMITAMRSYEASSSSIGTVKNMFNKAL 142



 Score = 37.5 bits (85), Expect = 1.5,   Method: Composition-based stats.
 Identities = 9/34 (26%), Positives = 18/34 (52%), Gaps = 2/34 (5%)

Query: 1  MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTV 32
          M   T+ +IG +   A    ++T++ N++N  T 
Sbjct: 1  MDLFTAMDIGSSGMSAQRTTMNTISMNLANIKTT 34


>gi|209545589|ref|YP_002277818.1| flagellar hook-associated protein FlgK [Gluconacetobacter
          diazotrophicus PAl 5]
 gi|209533266|gb|ACI53203.1| flagellar hook-associated protein FlgK [Gluconacetobacter
          diazotrophicus PAl 5]
          Length = 503

 Score = 43.3 bits (100), Expect = 0.031,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 24/48 (50%), Gaps = 2/48 (4%)

Query: 1  MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46
          M   +S +   +    +E +L  +++N+SN+ T G+ +   + S  V 
Sbjct: 1  MDLLSSLSTATSGLNGIEYQLGVLSNNVSNSSTTGYVSETAEVSSAVA 48


>gi|313634361|gb|EFS00958.1| flagellar basal-body rod protein FlgC [Listeria seeligeri FSL
           N1-067]
          Length = 138

 Score = 43.3 bits (100), Expect = 0.031,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 21/40 (52%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           G++  +N +   EM  ++   + + + T+ +  NEK M +
Sbjct: 92  GYVNYANVDMTAEMTNLMVGQKMYAANTSALQANEKMMEK 131



 Score = 38.3 bits (87), Expect = 1.0,   Method: Composition-based stats.
 Identities = 8/30 (26%), Positives = 15/30 (50%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTD 30
          M    N   +A  A +Q +   ++N++N D
Sbjct: 1  MFEGINTSGSALNAAKQWMEVSSNNIANAD 30


>gi|256370952|ref|YP_003108776.1| flagellar basal body rod protein [Acidimicrobium ferrooxidans DSM
           10331]
 gi|256007536|gb|ACU53103.1| flagellar basal body rod protein [Acidimicrobium ferrooxidans DSM
           10331]
          Length = 111

 Score = 43.3 bits (100), Expect = 0.031,   Method: Composition-based stats.
 Identities = 14/90 (15%), Positives = 29/90 (32%)

Query: 11  AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
           A  AL+ +   +A+N++N DT G+    V F   + A   +     + V      +    
Sbjct: 11  ALDALQIQSDAIANNVANVDTPGYIQSNVSFQSSLAAALANGGTATTSVTPSSNPVGLNG 70

Query: 71  GSFISTGTELDFALEGDAWFALESPRGIIL 100
            +                + A+ +      
Sbjct: 71  NNVSLGQELTQATTNAMDYQAVSNELTTYF 100


>gi|229592133|ref|YP_002874252.1| flagellar basal body rod protein FlgB [Pseudomonas fluorescens
          SBW25]
 gi|312962591|ref|ZP_07777081.1| flagellar basal-body rod protein FlgB [Pseudomonas fluorescens
          WH6]
 gi|229363999|emb|CAY51549.1| putative flagellar basal-body rod protein [Pseudomonas
          fluorescens SBW25]
 gi|311283171|gb|EFQ61762.1| flagellar basal-body rod protein FlgB [Pseudomonas fluorescens
          WH6]
          Length = 135

 Score = 43.3 bits (100), Expect = 0.032,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 26/65 (40%)

Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76
          QR   +A+N++N DT  ++   + FS V+ A ++        +        +  G     
Sbjct: 21 QRAEVLANNIANADTPNYKARDLDFSAVLAAQQDKTKNGTFALNMTNSRHIEAQGLSSGD 80

Query: 77 GTELD 81
           + L 
Sbjct: 81 ESLLY 85


>gi|15639647|ref|NP_219097.1| flagellar hook-associated protein FlgK [Treponema pallidum subsp.
           pallidum str. Nichols]
 gi|189025885|ref|YP_001933657.1| flagellar hook-associated protein FlgK [Treponema pallidum subsp.
           pallidum SS14]
 gi|3322960|gb|AAC65634.1| flagellar hook-associated protein 1 (flgK) [Treponema pallidum
           subsp. pallidum str. Nichols]
 gi|189018460|gb|ACD71078.1| flagellar hook-associated protein 1 [Treponema pallidum subsp.
           pallidum SS14]
 gi|291060027|gb|ADD72762.1| flagellar hook-associated protein FlgK [Treponema pallidum subsp.
           pallidum str. Chicago]
          Length = 625

 Score = 43.3 bits (100), Expect = 0.032,   Method: Composition-based stats.
 Identities = 7/42 (16%), Positives = 14/42 (33%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            S  N   E+  +I     +N+    I    + +   I  + 
Sbjct: 583 TSGVNIDEELADIIKFQHGYNASARFIAAVNEMLDTVINRMG 624



 Score = 35.6 bits (80), Expect = 6.5,   Method: Composition-based stats.
 Identities = 16/110 (14%), Positives = 27/110 (24%), Gaps = 8/110 (7%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDIDQKISFVA 60
           S  +G  A  A +Q + T   N+SN+ T G+   +V    F  +     +          
Sbjct: 6   SIELGKRALYAHKQSVQTAGHNVSNSSTPGYSRQRVNLDSFEPLYRPDLSRAQLPGQIGQ 65

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTD 110
                              LD  +                 R       +
Sbjct: 66  GVTIG-----SIARLRDQLLDSRIVSQTDEQGYWSTRDAYVRLLEQVYNE 110


>gi|146277710|ref|YP_001167869.1| flagellar basal-body rod protein FlgC [Rhodobacter sphaeroides
          ATCC 17025]
 gi|145555951|gb|ABP70564.1| flagellar basal-body rod protein FlgC [Rhodobacter sphaeroides
          ATCC 17025]
          Length = 138

 Score = 43.3 bits (100), Expect = 0.032,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 31/87 (35%), Gaps = 6/87 (6%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDT------VGFRTIKVKFSEVVGAIKNDIDQK 55
             F++G  A  A   R++TVA N++N  T        FR ++  F              
Sbjct: 5  NNIFDVGARALSAQMVRMNTVASNLANAGTVSDTAETAFRPLRPVFETTYADAVGKSGLS 64

Query: 56 ISFVASGKEYLSKEVGSFISTGTELDF 82
           + VA+      +   ++     + D 
Sbjct: 65 TTDVAAVVSLDREPARTYRPDHPQADA 91


>gi|327193034|gb|EGE59946.1| flagellar basal-body rod protein [Rhizobium etli CNPAF512]
          Length = 138

 Score = 43.3 bits (100), Expect = 0.032,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 19/47 (40%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           G ++  N N + EM  M    + +++    I +    +   I  + S
Sbjct: 91  GVVKLPNVNVLVEMADMREANRSYDANLQTIKQTRDLISSTIDLLKS 137



 Score = 42.2 bits (97), Expect = 0.058,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 28/80 (35%), Gaps = 7/80 (8%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNT----DTVG---FRTIKVKFSEVVGAIKNDIDQKI 56
          +  I  +   A   RL  V++N++N     DT G   +R   + F + +  +       +
Sbjct: 7  AMKIAGSGLEAQSTRLRIVSENIANARSTGDTPGADPYRRKTITFGQQMDHVSGVETVNV 66

Query: 57 SFVASGKEYLSKEVGSFIST 76
            V   +   S E       
Sbjct: 67 KKVGVDEGDFSTEFDPSNPA 86


>gi|227112518|ref|ZP_03826174.1| flagellar basal body rod protein FlgB [Pectobacterium carotovorum
          subsp. brasiliensis PBR1692]
 gi|227328335|ref|ZP_03832359.1| flagellar basal body rod protein FlgB [Pectobacterium carotovorum
          subsp. carotovorum WPP14]
          Length = 138

 Score = 43.3 bits (100), Expect = 0.032,   Method: Composition-based stats.
 Identities = 11/65 (16%), Positives = 22/65 (33%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   +A N++N DT G++   + F+  +           + +A     +    
Sbjct: 15 ALNLRAQRQEILAANIANADTPGYQARDIDFASQLSKTMEQGRVNGTGIALKTTSVRHIP 74

Query: 71 GSFIS 75
               
Sbjct: 75 AQNFQ 79


>gi|157164728|ref|YP_001466716.1| flagellar hook-associated protein FlgK [Campylobacter concisus
           13826]
 gi|157101468|gb|EAT97207.2| flagellar hook-associated protein FlgK [Campylobacter concisus
           13826]
          Length = 623

 Score = 43.3 bits (100), Expect = 0.032,   Method: Composition-based stats.
 Identities = 8/77 (10%), Positives = 29/77 (37%), Gaps = 4/77 (5%)

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLE----DSNANSMYEMGQMIHLTQKFNS 222
           +G+ R   + ++ +         +  +++R   E     S  ++  E+  +I     + +
Sbjct: 544 EGYYRYFTTDMASDTEANNTIHDTNTSLQRTAEEEFQSTSGVDTNEELTNLIRFQASYGA 603

Query: 223 ITTLIDENEKSMLEAIR 239
              +I   ++ +   + 
Sbjct: 604 AAKIITTVDQMLDTLLS 620



 Score = 41.8 bits (96), Expect = 0.093,   Method: Composition-based stats.
 Identities = 11/80 (13%), Positives = 30/80 (37%), Gaps = 2/80 (2%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE--VVGAIKNDIDQKISFVAS 61
          S   G++   A + ++ST  +N++N D+  +   +V  S    +  +   +         
Sbjct: 7  SLGTGVSGLNAAQVQISTTGNNITNADSNYYTRQRVVQSASPAMNTVPGGVGTGTQVDTV 66

Query: 62 GKEYLSKEVGSFISTGTELD 81
           + +          + + L+
Sbjct: 67 TRLHDEFAYSRLKYSSSNLE 86


>gi|304321145|ref|YP_003854788.1| putative flagellar basal-body rod protein FlgC [Parvularcula
          bermudensis HTCC2503]
 gi|303300047|gb|ADM09646.1| putative flagellar basal-body rod protein FlgC [Parvularcula
          bermudensis HTCC2503]
          Length = 127

 Score = 43.3 bits (100), Expect = 0.032,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 21/42 (50%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
           TS  I      A   R+ TV +N+SN DT G++   + FS 
Sbjct: 6  LTSLRIAGDGMNAQSFRMRTVNENLSNIDTPGYQRKMLTFST 47



 Score = 40.6 bits (93), Expect = 0.20,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 17/43 (39%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           GF+E SN + + E+       + F++      +  +     I 
Sbjct: 80  GFVEMSNVDMLTELSDAREAKRSFDANIEAFRQAREMYAGLIS 122


>gi|297584032|ref|YP_003699812.1| flagellar basal-body rod protein FlgB [Bacillus selenitireducens
          MLS10]
 gi|297142489|gb|ADH99246.1| flagellar basal-body rod protein FlgB [Bacillus selenitireducens
          MLS10]
          Length = 134

 Score = 43.3 bits (100), Expect = 0.033,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 22/42 (52%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51
           +  A  +R  T++DN++N DT  ++  K  F+  +    +D
Sbjct: 14 TSLNASARRQDTISDNVANVDTPNYKAKKTVFNHQLQRAMDD 55


>gi|160878464|ref|YP_001557432.1| flagellar hook-associated protein FlgK [Clostridium phytofermentans
           ISDg]
 gi|160427130|gb|ABX40693.1| flagellar hook-associated protein FlgK [Clostridium phytofermentans
           ISDg]
          Length = 613

 Score = 43.3 bits (100), Expect = 0.033,   Method: Composition-based stats.
 Identities = 14/97 (14%), Positives = 27/97 (27%), Gaps = 7/97 (7%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
             +IG +   A +  L+T A N++N +T GF          V   +     +++      
Sbjct: 7   GLSIGNSGLYASQAGLNTTAHNIANIETEGFSRQ-------VAKQQAGTALRVNSSYGMV 59

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL 100
                  G      +  D     +             
Sbjct: 60  GTGVDIKGVTQIRDSYYDLKYMKNNTMYGAYSTKEYY 96



 Score = 37.2 bits (84), Expect = 1.9,   Method: Composition-based stats.
 Identities = 9/77 (11%), Positives = 21/77 (27%)

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
           Q  V                +      V+   L  S  +   E   ++   + +N    +
Sbjct: 537 QTLVAEIGIDAKQASNFAENQMNILSAVQNQRLSISGVDQEEEAMNLVRYQKAYNLSAKV 596

Query: 227 IDENEKSMLEAIRNIAS 243
           I   ++     I  + +
Sbjct: 597 ISIMDQIYDRLINYMGA 613


>gi|228984828|ref|ZP_04145000.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
 gi|228775026|gb|EEM23420.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
          Length = 137

 Score = 43.3 bits (100), Expect = 0.033,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 22/40 (55%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           G++   N +   EM  ++   + + + T++++ N+K + +
Sbjct: 91  GYVRYPNIDVTAEMTNVMVAQKMYEANTSVLNANKKMLDK 130



 Score = 41.8 bits (96), Expect = 0.092,   Method: Composition-based stats.
 Identities = 5/33 (15%), Positives = 13/33 (39%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG 33
          M  + N   +      + +   ++N+ N +T  
Sbjct: 1  MFQAINASGSGLTTARKWMEVTSNNIVNANTTA 33


>gi|237653586|ref|YP_002889900.1| flagellar basal-body rod protein FlgB [Thauera sp. MZ1T]
 gi|237624833|gb|ACR01523.1| flagellar basal-body rod protein FlgB [Thauera sp. MZ1T]
          Length = 134

 Score = 43.3 bits (100), Expect = 0.033,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 20/56 (35%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65
           A      R   +A N++N DT  ++   V F   +    N   + +    +   +
Sbjct: 14 TALNLQAHRQQLIASNIANADTPHYKARDVDFRAALQGALNASREGVQMATTQAGH 69


>gi|300722675|ref|YP_003711965.1| flagellar hook-filament junction protein 1 [Xenorhabdus
          nematophila ATCC 19061]
 gi|297629182|emb|CBJ89778.1| flagellar biosynthesis; hook-filament junction protein 1
          [Xenorhabdus nematophila ATCC 19061]
          Length = 546

 Score = 42.9 bits (99), Expect = 0.033,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 29/84 (34%), Gaps = 1/84 (1%)

Query: 1  MQTSF-NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFV 59
          M  S  N  ++   A +  +  V +N++N+ +  +       ++  G +          V
Sbjct: 1  MSNSLMNTAMSGINAAQVAMGVVGNNIANSKSADYNRQTTVMTQNNGTMSPVGFVGNGVV 60

Query: 60 ASGKEYLSKEVGSFISTGTELDFA 83
           SG      E  +      +  +A
Sbjct: 61 VSGINREYSEFITQQHNAAQTKYA 84


>gi|187932920|ref|YP_001885038.1| flagellar basal body rod protein FlgB [Clostridium botulinum B
          str. Eklund 17B]
 gi|187721073|gb|ACD22294.1| flagellar basal-body rod protein FlgB [Clostridium botulinum B
          str. Eklund 17B]
          Length = 133

 Score = 42.9 bits (99), Expect = 0.033,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 31/78 (39%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
             A   R   +A+NM+N +T G++   V F E +    +  D  +    S     + ++
Sbjct: 18 GLKASNARSKAIANNMANINTKGYKKFNVIFEENLKNNSDKKDLSLKITNSRHLRGNNDL 77

Query: 71 GSFISTGTELDFALEGDA 88
             I    E + ++  D 
Sbjct: 78 NGDIEVVREENTSMRTDD 95


>gi|70731826|ref|YP_261568.1| flagellar basal body rod protein FlgB [Pseudomonas fluorescens
           Pf-5]
 gi|68346125|gb|AAY93731.1| flagellar basal-body rod protein FlgB [Pseudomonas fluorescens
           Pf-5]
          Length = 155

 Score = 42.9 bits (99), Expect = 0.034,   Method: Composition-based stats.
 Identities = 11/65 (16%), Positives = 23/65 (35%)

Query: 17  QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76
           +R   +A+N++N DT  ++   + FS V+             +        +  G     
Sbjct: 41  KRAEVLANNIANADTPNYKARDLDFSAVLAEQNQKAQNGTFALNMTNNRHIEAQGLSSGD 100

Query: 77  GTELD 81
            + L 
Sbjct: 101 ESLLY 105


>gi|255321465|ref|ZP_05362623.1| flagellar basal-body rod protein FlgB [Campylobacter showae
          RM3277]
 gi|255301321|gb|EET80580.1| flagellar basal-body rod protein FlgB [Campylobacter showae
          RM3277]
          Length = 145

 Score = 42.9 bits (99), Expect = 0.034,   Method: Composition-based stats.
 Identities = 9/58 (15%), Positives = 20/58 (34%), Gaps = 6/58 (10%)

Query: 1  MQTSFNIGLA------AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M        +      A  +   R   ++ N++N DT  ++   + F   +     +I
Sbjct: 1  MFAGIQTSKSKPLVESALASRNLRQQMISSNIANIDTPFYKARDIAFEAALSQTAQEI 58


>gi|183220164|ref|YP_001838160.1| flagellar basal body rod protein FlgB [Leptospira biflexa serovar
          Patoc strain 'Patoc 1 (Paris)']
 gi|189910284|ref|YP_001961839.1| flagellar basal body rod protein FlgB [Leptospira biflexa serovar
          Patoc strain 'Patoc 1 (Ames)']
 gi|167774960|gb|ABZ93261.1| Endoflagellar proximal basal body rod protein [Leptospira biflexa
          serovar Patoc strain 'Patoc 1 (Ames)']
 gi|167778586|gb|ABZ96884.1| Flagellar basal-body rod protein FlgB [Leptospira biflexa serovar
          Patoc strain 'Patoc 1 (Paris)']
          Length = 143

 Score = 42.9 bits (99), Expect = 0.034,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 17/41 (41%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51
             A  QR   + DN++N D   F+  +V F  ++      
Sbjct: 17 GLGAATQRRKVITDNIANADVPNFKRSEVVFESMLKRAIES 57


>gi|89098647|ref|ZP_01171529.1| flagellar basal-body rod protein B [Bacillus sp. NRRL B-14911]
 gi|89086609|gb|EAR65728.1| flagellar basal-body rod protein B [Bacillus sp. NRRL B-14911]
          Length = 135

 Score = 42.9 bits (99), Expect = 0.034,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 30/88 (34%), Gaps = 2/88 (2%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK--NDIDQKISFVA 60
           + +    +      +   VA N++N DT  ++   V F  V+ +      I+ K + V 
Sbjct: 9  NTISTLENSLNQASLKQKVVAQNIANADTPNYKAKDVSFKSVLQSEMAIGGIEAKRTDVR 68

Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDA 88
                     S +      DF   G+ 
Sbjct: 69 HYSFAAEGSGQSGVIINKNTDFNHNGNN 96


>gi|325982365|ref|YP_004294767.1| flagellar hook-associated protein FlgK [Nitrosomonas sp. AL212]
 gi|325531884|gb|ADZ26605.1| flagellar hook-associated protein FlgK [Nitrosomonas sp. AL212]
          Length = 638

 Score = 42.9 bits (99), Expect = 0.034,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 29/82 (35%), Gaps = 1/82 (1%)

Query: 1  MQTS-FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFV 59
          M     +IG++  L  + +L T + N+SN  T G+   +V  +                 
Sbjct: 1  MGNGILDIGISGLLTAQNQLLTTSHNISNVATPGYNRQQVILNTNTPQSSGAGFVGRGVH 60

Query: 60 ASGKEYLSKEVGSFISTGTELD 81
          ++  + +  +     S   +  
Sbjct: 61 STTVQRIYNQFLVNQSLQIQTQ 82



 Score = 37.9 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 18/146 (12%), Positives = 39/146 (26%), Gaps = 3/146 (2%)

Query: 94  SPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK 153
                  T          G     SG     D+ ++   +    +  N    G +  K  
Sbjct: 494 PATNQAYTEGADISFN--GYTFQISGNPAAGDIFTITPNLNGSADNRNALLLGALQTKNT 551

Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQM 213
           V      Y     Q  V +  +        +  +      ++      S  N   E   +
Sbjct: 552 VENGTASYQSAYGQ-LVSQIGNKTRELEVTSKSQANFLAQIENTIQSTSGVNLDEEAANL 610

Query: 214 IHLTQKFNSITTLIDENEKSMLEAIR 239
           +   Q + + + +I+ +       +R
Sbjct: 611 MRFQQAYQAASKIIEMSNTLFDSILR 636


>gi|253688975|ref|YP_003018165.1| flagellar basal-body rod protein FlgB [Pectobacterium carotovorum
          subsp. carotovorum PC1]
 gi|251755553|gb|ACT13629.1| flagellar basal-body rod protein FlgB [Pectobacterium carotovorum
          subsp. carotovorum PC1]
          Length = 138

 Score = 42.9 bits (99), Expect = 0.034,   Method: Composition-based stats.
 Identities = 11/65 (16%), Positives = 22/65 (33%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   +A N++N DT G++   + F+  +           + +A     +    
Sbjct: 15 ALNLRAQRQEILAANIANADTPGYQARDIDFASQLSKTMEQGRVNGTGIALKTTSVRHIP 74

Query: 71 GSFIS 75
               
Sbjct: 75 AQNFQ 79


>gi|218516085|ref|ZP_03512925.1| flagellar basal body rod protein FlgC [Rhizobium etli 8C-3]
          Length = 132

 Score = 42.9 bits (99), Expect = 0.034,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 19/47 (40%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           G ++  N N + EM  M    + +++    I +    +   I  + S
Sbjct: 85  GVVKLPNVNVLVEMADMREANRSYDANLQTIKQTRDLISSTIDLLKS 131



 Score = 42.2 bits (97), Expect = 0.066,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 27/80 (33%), Gaps = 7/80 (8%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNT----DTVG---FRTIKVKFSEVVGAIKNDIDQKI 56
          +  I  +   A   RL  V++N++N     DT G   +R   + F + +          +
Sbjct: 1  AMKIAGSGLEAQSTRLRIVSENIANARSTGDTPGADPYRRKTITFGQQMDRASGVETVNV 60

Query: 57 SFVASGKEYLSKEVGSFIST 76
            V   +   S E       
Sbjct: 61 KKVGVDEGDFSTEFDPSNPA 80


>gi|308186399|ref|YP_003930530.1| Flagellar hook-associated protein 1 (HAP1) [Pantoea vagans C9-1]
 gi|308056909|gb|ADO09081.1| Flagellar hook-associated protein 1 (HAP1) [Pantoea vagans C9-1]
          Length = 550

 Score = 42.9 bits (99), Expect = 0.035,   Method: Composition-based stats.
 Identities = 15/159 (9%), Positives = 48/159 (30%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M +  N  ++   A +  LST ++N+SN    G+       ++    ++ +         
Sbjct: 1   MSSIINSAMSGLSAAQAALSTTSNNISNYTVAGYSRQTTVLAQANSTLQGNSYYGNGVNI 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
           +G +       +    G+  +++        + +   ++ T       +  G   +    
Sbjct: 61  TGVQREYDAFIATQLRGSSANYSAVSTQHSQISNIDDLLSTSTTSLSTSLQGFFTNLQNV 120

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG 159
               +  S    +    +      +        +  ++ 
Sbjct: 121 VSNANDPSARQSMLSNAQGLVSQFQTSAQYLNNMQNSVN 159


>gi|283956843|ref|ZP_06374316.1| putative flagellar hook-associated protein FlgK [Campylobacter
          jejuni subsp. jejuni 1336]
 gi|283791569|gb|EFC30365.1| putative flagellar hook-associated protein FlgK [Campylobacter
          jejuni subsp. jejuni 1336]
          Length = 608

 Score = 42.9 bits (99), Expect = 0.035,   Method: Composition-based stats.
 Identities = 8/36 (22%), Positives = 17/36 (47%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
             G+    A E +++T  +N+SN +   +   +V 
Sbjct: 7  LYTGVTGLKASEVQIATTGNNISNANATFYTRQRVV 42



 Score = 39.9 bits (91), Expect = 0.35,   Method: Composition-based stats.
 Identities = 5/48 (10%), Positives = 18/48 (37%)

Query: 191 GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
             +V   +   S  N+  E+  +I     + +   ++   ++ +   +
Sbjct: 557 YNSVYSEYQSKSGVNTNEELAALIQYQSSYGAAAKIVSTVDQMLDTLL 604


>gi|148925638|ref|ZP_01809326.1| putative flagellar hook-associated protein [Campylobacter jejuni
          subsp. jejuni CG8486]
 gi|145845648|gb|EDK22739.1| putative flagellar hook-associated protein [Campylobacter jejuni
          subsp. jejuni CG8486]
          Length = 608

 Score = 42.9 bits (99), Expect = 0.035,   Method: Composition-based stats.
 Identities = 8/36 (22%), Positives = 17/36 (47%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
             G+    A E +++T  +N+SN +   +   +V 
Sbjct: 7  LYTGVTGLKASEVQIATTGNNISNANATFYTRQRVV 42



 Score = 39.9 bits (91), Expect = 0.35,   Method: Composition-based stats.
 Identities = 5/48 (10%), Positives = 18/48 (37%)

Query: 191 GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
             +V   +   S  N+  E+  +I     + +   ++   ++ +   +
Sbjct: 557 YNSVYSEYQSKSGVNTNEELAALIQYQSSYGAAAKIVSTVDQMLDTLL 604


>gi|327393477|dbj|BAK10899.1| flagellar hook-associated protein 1 [Pantoea ananatis AJ13355]
          Length = 546

 Score = 42.9 bits (99), Expect = 0.035,   Method: Composition-based stats.
 Identities = 21/182 (11%), Positives = 52/182 (28%), Gaps = 3/182 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISF 58
           M +  N  ++   A +  LST ++N+SN    G+       +E    ++        ++ 
Sbjct: 1   MSSIINSAMSGLSAAQAALSTTSNNISNYTVAGYSRQTTILAEANSTLQGKSYYGNGVNV 60

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDG-SLVSA 117
               +EY S        +    + A    +  +         T +    +     ++ + 
Sbjct: 61  TGVQREYDSFIAAQLRGSSATYNAANTQYSQVSNIDDLMSTSTTNLSTAIQGFFSNMQNV 120

Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177
                        +   Q        +   ++     + T     VD    F  + ++  
Sbjct: 121 VSNANDPAARQSMLSNSQGLVNQFQTQAQYLTNMQNSVNTNIASDVDQINTFTTQISNLN 180

Query: 178 SP 179
             
Sbjct: 181 QQ 182


>gi|269796400|ref|YP_003315855.1| flagellar basal-body rod protein FlgC [Sanguibacter keddieii DSM
           10542]
 gi|269098585|gb|ACZ23021.1| flagellar basal-body rod protein FlgC [Sanguibacter keddieii DSM
           10542]
          Length = 134

 Score = 42.9 bits (99), Expect = 0.035,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 47/140 (33%), Gaps = 10/140 (7%)

Query: 100 LTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG 159
           +T  G   +   G  V+      V D  +    +   DE          S  G      G
Sbjct: 1   MTTFGAIGIASTGMTVNRKWLDAVSDNLANINTVRPSDEAAFQARYVVASAVGYPENGQG 60

Query: 160 LYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
           +    +  G       G   + P  PL D        G+++    +   +M QMI   + 
Sbjct: 61  VQVAGIELG----SAEGRMVHEPDHPLADAE------GYVKYPEVDMAGQMSQMIMAQRG 110

Query: 220 FNSITTLIDENEKSMLEAIR 239
           + +  +++D  + +   A++
Sbjct: 111 YQANASVVDRAKATYEAALQ 130



 Score = 39.5 bits (90), Expect = 0.38,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 22/85 (25%), Gaps = 6/85 (7%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKIS 57
          +  I         + L  V+DN++N +TV       F+   V  S V         Q   
Sbjct: 6  AIGIASTGMTVNRKWLDAVSDNLANINTVRPSDEAAFQARYVVASAVGYPENGQGVQVAG 65

Query: 58 FVASGKEYLSKEVGSFISTGTELDF 82
                E              E   
Sbjct: 66 IELGSAEGRMVHEPDHPLADAEGYV 90


>gi|205373368|ref|ZP_03226172.1| flagellar basal body rod protein FlgB [Bacillus coahuilensis
          m4-4]
          Length = 133

 Score = 42.9 bits (99), Expect = 0.035,   Method: Composition-based stats.
 Identities = 13/76 (17%), Positives = 26/76 (34%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69
          A       +   ++ N++N DT  ++   VKF         DI   ++         +  
Sbjct: 14 AGLNYSTDKQKAISQNIANVDTPNYKAKDVKFESYFKKSVADIQANVTSDKHMSFKPTSA 73

Query: 70 VGSFISTGTELDFALE 85
           G+  +  +  DF   
Sbjct: 74 TGTSAAPYSSSDFIYH 89


>gi|121612872|ref|YP_001001115.1| flagellar hook-associated protein FlgK [Campylobacter jejuni
          subsp. jejuni 81-176]
 gi|87249591|gb|EAQ72550.1| flagellar hook-associated protein FlgK, putative [Campylobacter
          jejuni subsp. jejuni 81-176]
          Length = 608

 Score = 42.9 bits (99), Expect = 0.035,   Method: Composition-based stats.
 Identities = 8/36 (22%), Positives = 17/36 (47%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
             G+    A E +++T  +N+SN +   +   +V 
Sbjct: 7  LYTGVTGLKASEVQIATTGNNISNANATFYTRQRVV 42



 Score = 39.9 bits (91), Expect = 0.35,   Method: Composition-based stats.
 Identities = 5/48 (10%), Positives = 18/48 (37%)

Query: 191 GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
             +V   +   S  N+  E+  +I     + +   ++   ++ +   +
Sbjct: 557 YNSVYSEYQSKSGVNTNEELAALIQYQSSYGAAAKIVSTVDQMLDTLL 604


>gi|220925381|ref|YP_002500683.1| flagellar basal body rod protein FlgB [Methylobacterium nodulans
          ORS 2060]
 gi|219949988|gb|ACL60380.1| flagellar basal body rod protein [Methylobacterium nodulans ORS
          2060]
          Length = 134

 Score = 42.9 bits (99), Expect = 0.036,   Method: Composition-based stats.
 Identities = 7/29 (24%), Positives = 14/29 (48%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIK 38
                + R   +A+N++N +T GF+   
Sbjct: 14 NRMQWHQTRQKVLAENVANANTPGFKARD 42


>gi|190890361|ref|YP_001976903.1| flagellar basal-body rod protein [Rhizobium etli CIAT 652]
 gi|190695640|gb|ACE89725.1| flagellar basal-body rod protein [Rhizobium etli CIAT 652]
          Length = 138

 Score = 42.9 bits (99), Expect = 0.036,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 19/47 (40%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           G ++  N N + EM  M    + +++    I +    +   I  + S
Sbjct: 91  GVVKLPNVNVLVEMADMREANRSYDANLQTIKQTRDLISSTIDLLKS 137



 Score = 41.8 bits (96), Expect = 0.074,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 27/80 (33%), Gaps = 7/80 (8%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNT----DTVG---FRTIKVKFSEVVGAIKNDIDQKI 56
          +  I  +   A   RL  V++N++N     DT G   +R   + F + +          +
Sbjct: 7  AMKIAGSGLEAQSTRLRIVSENIANARSTGDTPGADPYRRKTITFGQQMDRASGVETVNV 66

Query: 57 SFVASGKEYLSKEVGSFIST 76
            V   +   S E       
Sbjct: 67 KKVGVDEGDFSTEFDPSNPA 86


>gi|86153170|ref|ZP_01071375.1| flagellar hook-associated protein FlgK [Campylobacter jejuni
          subsp. jejuni HB93-13]
 gi|85844055|gb|EAQ61265.1| flagellar hook-associated protein FlgK [Campylobacter jejuni
          subsp. jejuni HB93-13]
          Length = 608

 Score = 42.9 bits (99), Expect = 0.036,   Method: Composition-based stats.
 Identities = 8/36 (22%), Positives = 17/36 (47%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
             G+    A E +++T  +N+SN +   +   +V 
Sbjct: 7  LYTGVTGLKASEVQIATTGNNISNANATFYTRQRVV 42



 Score = 39.9 bits (91), Expect = 0.37,   Method: Composition-based stats.
 Identities = 5/48 (10%), Positives = 18/48 (37%)

Query: 191 GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
             +V   +   S  N+  E+  +I     + +   ++   ++ +   +
Sbjct: 557 YNSVYSEYQSKSGVNTNEELAALIQYQSSYGAAAKIVSTVDQMLDTLL 604


>gi|329890582|ref|ZP_08268925.1| flagellar basal-body rod protein FlgC [Brevundimonas diminuta ATCC
           11568]
 gi|328845883|gb|EGF95447.1| flagellar basal-body rod protein FlgC [Brevundimonas diminuta ATCC
           11568]
          Length = 144

 Score = 42.9 bits (99), Expect = 0.036,   Method: Composition-based stats.
 Identities = 5/42 (11%), Positives = 17/42 (40%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G+++  N +++ E   M    + + +   +I+         +
Sbjct: 98  GYVQRPNVDTLVEAMDMREAQRAYEANLNVIETARNMDSRTL 139



 Score = 40.2 bits (92), Expect = 0.24,   Method: Composition-based stats.
 Identities = 9/49 (18%), Positives = 21/49 (42%), Gaps = 7/49 (14%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSE 43
           T+  +  +A  A + R+  +A+N++N ++         +R     F  
Sbjct: 14 NTAMAVASSALKAQQSRMRIIAENIANAESTANVAGGQPYRRQTPVFQA 62


>gi|283850788|ref|ZP_06368074.1| flagellar basal body rod protein [Desulfovibrio sp. FW1012B]
 gi|283573711|gb|EFC21685.1| flagellar basal body rod protein [Desulfovibrio sp. FW1012B]
          Length = 121

 Score = 42.9 bits (99), Expect = 0.036,   Method: Composition-based stats.
 Identities = 4/37 (10%), Positives = 14/37 (37%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S+ +   ++  M   ++ F +   +I   +      +
Sbjct: 81  SDVDLAGQVVSMTLASRTFEANAAVIRTADDMAGTLL 117


>gi|218672513|ref|ZP_03522182.1| flagellar basal body rod protein FlgC [Rhizobium etli GR56]
          Length = 138

 Score = 42.9 bits (99), Expect = 0.036,   Method: Composition-based stats.
 Identities = 9/49 (18%), Positives = 21/49 (42%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           ++G ++  N N + EM  M    + +++    I +    +   I  + S
Sbjct: 89  QKGVVKLPNVNILVEMADMREANRSYDANLQTIKQTRDLISSTIDLLKS 137



 Score = 41.8 bits (96), Expect = 0.080,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 27/80 (33%), Gaps = 7/80 (8%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNT----DTVG---FRTIKVKFSEVVGAIKNDIDQKI 56
          +  I  +   A   RL  V++N++N     DT G   +R   + F + +          +
Sbjct: 7  AMKIAGSGLEAQSTRLRIVSENIANARSTGDTPGADPYRRKTITFGQQMDRASGVETVNV 66

Query: 57 SFVASGKEYLSKEVGSFIST 76
            V   +   S E       
Sbjct: 67 KKVGVDEGDFSTEFDPSNPA 86


>gi|89895774|ref|YP_519261.1| hypothetical protein DSY3028 [Desulfitobacterium hafniense Y51]
 gi|89335222|dbj|BAE84817.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 533

 Score = 42.9 bits (99), Expect = 0.037,   Method: Composition-based stats.
 Identities = 8/53 (15%), Positives = 18/53 (33%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK 55
          +   +   A  + +  L T   N++N +T+G+    V            +   
Sbjct: 6  SGLELARRALESQQIALDTTGHNIANANTIGYTRQVVNLQATSPDSIPGMGHY 58



 Score = 39.5 bits (90), Expect = 0.47,   Method: Composition-based stats.
 Identities = 2/39 (5%), Positives = 14/39 (35%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            N   E+  ++   + + +   ++   +  +   +  + 
Sbjct: 492 VNMDEEITNLVKFQKSYTAAARIVTMLDSMLDTIVNGMG 530


>gi|315127356|ref|YP_004069359.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
          [Pseudoalteromonas sp. SM9913]
 gi|315015870|gb|ADT69208.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
          [Pseudoalteromonas sp. SM9913]
          Length = 136

 Score = 42.9 bits (99), Expect = 0.037,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 28/55 (50%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65
          A L   QR   +A N++N DT G++   + F+  +   K++     + V + +++
Sbjct: 15 AMLIRSQRAEMLATNIANADTPGYKAKDIDFASALKTAKSNQLSGNTMVRTNEKH 69


>gi|188588215|ref|YP_001920199.1| flagellar basal body rod protein FlgB [Clostridium botulinum E3
          str. Alaska E43]
 gi|188498496|gb|ACD51632.1| flagellar basal-body rod protein FlgB [Clostridium botulinum E3
          str. Alaska E43]
          Length = 133

 Score = 42.9 bits (99), Expect = 0.037,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 20/43 (46%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
             A   R   +A+NM+N +T G++   V F E +    N  D
Sbjct: 18 GLKASNARSKAIANNMANINTKGYKKFNVIFEENLKNNSNTKD 60


>gi|261821150|ref|YP_003259256.1| flagellar basal body rod protein FlgB [Pectobacterium wasabiae
          WPP163]
 gi|261605163|gb|ACX87649.1| flagellar basal-body rod protein FlgB [Pectobacterium wasabiae
          WPP163]
          Length = 138

 Score = 42.9 bits (99), Expect = 0.037,   Method: Composition-based stats.
 Identities = 11/65 (16%), Positives = 22/65 (33%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   +A N++N DT G++   + F+  +           + +A     +    
Sbjct: 15 ALNLRAQRQEILAANIANADTPGYQARDIDFASQLSKTMEQGRVNGTGIALKTTSVRHIP 74

Query: 71 GSFIS 75
               
Sbjct: 75 AQNFQ 79


>gi|217077496|ref|YP_002335214.1| flagellar basal-body rod protein FlgB [Thermosipho africanus
          TCF52B]
 gi|217037351|gb|ACJ75873.1| flagellar basal-body rod protein FlgB [Thermosipho africanus
          TCF52B]
          Length = 127

 Score = 42.9 bits (99), Expect = 0.037,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 23/50 (46%), Gaps = 1/50 (2%)

Query: 1  MQTS-FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK 49
          M  S F+   AA     +R    + N++N +T  ++   + F E++   K
Sbjct: 1  MFNSNFSTLKAAMDVALKRQEIHSQNIANAETPNYKRKYIVFEELLNESK 50


>gi|302391042|ref|YP_003826862.1| flagellar hook-associated protein FlgK [Acetohalobium arabaticum
           DSM 5501]
 gi|302203119|gb|ADL11797.1| flagellar hook-associated protein FlgK [Acetohalobium arabaticum
           DSM 5501]
          Length = 801

 Score = 42.9 bits (99), Expect = 0.037,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 15/40 (37%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           S  +   EM +MI   Q + +        ++ +   +  I
Sbjct: 760 SGVSLDEEMSKMIKYQQSYTAAAKFTSTMDEILNTLVNGI 799



 Score = 38.7 bits (88), Expect = 0.74,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 15/37 (40%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39
          +   +G  A     + L     N+SN +T G+   + 
Sbjct: 6  SGIELGKRALQVQRKSLDVTGHNISNANTEGYSRQEA 42


>gi|156934434|ref|YP_001438350.1| flagellar hook-associated protein FlgK [Cronobacter sakazakii
          ATCC BAA-894]
 gi|156532688|gb|ABU77514.1| hypothetical protein ESA_02265 [Cronobacter sakazakii ATCC
          BAA-894]
          Length = 552

 Score = 42.9 bits (99), Expect = 0.037,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 35/98 (35%), Gaps = 6/98 (6%)

Query: 1  MQTSF-NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFV 59
          M +S  N  ++   A +  LSTV++N+SN +  G+          V    N    +  +V
Sbjct: 1  MSSSLINSAMSGLSAAQTALSTVSNNISNYNVAGYTRQTT-----VLGQSNSTMTQGGWV 55

Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG 97
           +G      +         +L+ A    +       + 
Sbjct: 56 GNGVYVSGIQREYDAFITNQLNAAQNQSSGLTTRYEQM 93


>gi|313901989|ref|ZP_07835405.1| flagellar basal body rod protein FlgB [Thermaerobacter
          subterraneus DSM 13965]
 gi|313467778|gb|EFR63276.1| flagellar basal body rod protein FlgB [Thermaerobacter
          subterraneus DSM 13965]
          Length = 70

 Score = 42.9 bits (99), Expect = 0.038,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 19/40 (47%)

Query: 9  LAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI 48
           A    L  R   +A N++N +T G++   + F+  + A 
Sbjct: 10 AAGLEVLALRQRLLAQNVANAETPGYKRYDLDFARALEAA 49


>gi|300716224|ref|YP_003741027.1| flagellar hook-filament junction protein 1 [Erwinia billingiae
          Eb661]
 gi|299062060|emb|CAX59176.1| Flagellar hook-filament junction protein 1 [Erwinia billingiae
          Eb661]
          Length = 550

 Score = 42.9 bits (99), Expect = 0.038,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 26/69 (37%), Gaps = 1/69 (1%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M    N  L+   A    L+T ++N+SN    G+       ++  G+  +  +   + V+
Sbjct: 1  MSNLINTALSGINAASAALNTTSNNISNYSVAGYSRQTTVLAQA-GSTLSGTNYYGNGVS 59

Query: 61 SGKEYLSKE 69
                  +
Sbjct: 60 VASVNREYD 68


>gi|297570285|ref|YP_003691629.1| flagellar hook-associated protein FlgK [Desulfurivibrio
          alkaliphilus AHT2]
 gi|296926200|gb|ADH87010.1| flagellar hook-associated protein FlgK [Desulfurivibrio
          alkaliphilus AHT2]
          Length = 870

 Score = 42.9 bits (99), Expect = 0.038,   Method: Composition-based stats.
 Identities = 8/33 (24%), Positives = 14/33 (42%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTI 37
           N    A L  ++ +     N++N DT G+   
Sbjct: 8  LNTAKQALLTQQRSIQVTGHNVANVDTPGYSRQ 40



 Score = 42.5 bits (98), Expect = 0.044,   Method: Composition-based stats.
 Identities = 6/41 (14%), Positives = 17/41 (41%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  +   EM  +I     + +   LI  +++ ++  +  + 
Sbjct: 830 SGVSLDEEMANLIKFQHAYTAAARLISTSDEMLVTLLDTVR 870


>gi|223040425|ref|ZP_03610699.1| flagellar basal-body rod protein FlgB [Campylobacter rectus
          RM3267]
 gi|222878275|gb|EEF13382.1| flagellar basal-body rod protein FlgB [Campylobacter rectus
          RM3267]
          Length = 145

 Score = 42.9 bits (99), Expect = 0.038,   Method: Composition-based stats.
 Identities = 9/58 (15%), Positives = 20/58 (34%), Gaps = 6/58 (10%)

Query: 1  MQTSFNIGLA------AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M        +      A  +   R   ++ N++N DT  ++   + F   +     +I
Sbjct: 1  MFAGIQTSKSKPLVESALASRNLRQQMISSNIANIDTPFYKARDIAFEAALSQTAQEI 58


>gi|152983100|ref|YP_001353453.1| flagellar basal-body rod protein FlgB [Janthinobacterium sp.
          Marseille]
 gi|151283177|gb|ABR91587.1| flagellar basal-body rod protein FlgB [Janthinobacterium sp.
          Marseille]
          Length = 141

 Score = 42.9 bits (99), Expect = 0.038,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 19/42 (45%)

Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS 57
           +RL  VA N++N DT  ++   + F   +       D+ + 
Sbjct: 30 SKRLEVVASNIANADTPNYKARDIDFKTALNRALAAPDKIVP 71


>gi|313639043|gb|EFS04032.1| flagellar basal body rod protein FlgB [Listeria seeligeri FSL
           S4-171]
          Length = 133

 Score = 42.9 bits (99), Expect = 0.039,   Method: Composition-based stats.
 Identities = 10/104 (9%), Positives = 28/104 (26%)

Query: 12  QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
              L+     V++N++N +T  F+  +  F E +G+      Q            + +  
Sbjct: 12  LNYLQTANQVVSNNIANANTSNFKASETSFEESLGSSLRPSGQNNETTTGSLTKTNSKHL 71

Query: 72  SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115
           +                    +     + +        +    +
Sbjct: 72  TGTEIDQINAKVTTKGGSINEDGNNVNVTSEMISLTKNNQMYAL 115


>gi|229160708|ref|ZP_04288700.1| Flagellar basal-body rod protein FlgC [Bacillus cereus R309803]
 gi|228622723|gb|EEK79557.1| Flagellar basal-body rod protein FlgC [Bacillus cereus R309803]
          Length = 137

 Score = 42.9 bits (99), Expect = 0.039,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 22/40 (55%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           G++   N +   EM  ++   + + + T++++ N+K + +
Sbjct: 91  GYVRYPNIDVTAEMTNVMIAQKMYEANTSVLNANKKMLDK 130



 Score = 41.8 bits (96), Expect = 0.082,   Method: Composition-based stats.
 Identities = 5/33 (15%), Positives = 13/33 (39%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG 33
          M  + N   +      + +   ++N+ N +T  
Sbjct: 1  MFQAINASGSGLTTARKWMEVTSNNIVNANTTA 33


>gi|224825161|ref|ZP_03698267.1| flagellar basal-body rod protein FlgB [Lutiella nitroferrum 2002]
 gi|224602832|gb|EEG09009.1| flagellar basal-body rod protein FlgB [Lutiella nitroferrum 2002]
          Length = 136

 Score = 42.9 bits (99), Expect = 0.039,   Method: Composition-based stats.
 Identities = 9/54 (16%), Positives = 22/54 (40%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
          A     +R   +A N++N DT  ++ + + F+  + + +    +    V     
Sbjct: 15 ALNLRAKRAEVIASNIANADTPNYKAVDLDFASALQSAQGTQSRLALNVTDPAH 68


>gi|209549487|ref|YP_002281404.1| hypothetical protein Rleg2_1893 [Rhizobium leguminosarum bv.
          trifolii WSM2304]
 gi|209535243|gb|ACI55178.1| protein of unknown function DUF1078 domain protein [Rhizobium
          leguminosarum bv. trifolii WSM2304]
          Length = 101

 Score = 42.9 bits (99), Expect = 0.039,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 20/39 (51%)

Query: 6  NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44
          N  L+   A   R+  +A+N++N+ T G+  +    + V
Sbjct: 8  NTALSGMRAQTPRIGAIANNVANSSTSGYARLNTSLTSV 46


>gi|121596114|ref|YP_988010.1| flagellar basal-body rod protein FlgB [Acidovorax sp. JS42]
 gi|120608194|gb|ABM43934.1| flagellar basal-body rod protein FlgB [Acidovorax sp. JS42]
          Length = 151

 Score = 42.9 bits (99), Expect = 0.039,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 29/71 (40%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69
          +A L   +R   +A N++N DT G+     KF++ + A+            S  +     
Sbjct: 27 SALLLRSERQRAIASNIANADTPGYVARDFKFADAMRAVNEAQAPSPLRSQSVSDPRHIP 86

Query: 70 VGSFISTGTEL 80
          + +  S  ++ 
Sbjct: 87 LPAAASGSSDS 97


>gi|78357998|ref|YP_389447.1| flagellar basal-body rod protein [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78220403|gb|ABB39752.1| flagellar basal-body rod protein, putative [Desulfovibrio
           desulfuricans subsp. desulfuricans str. G20]
          Length = 125

 Score = 42.9 bits (99), Expect = 0.039,   Method: Composition-based stats.
 Identities = 5/40 (12%), Positives = 15/40 (37%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           S+ + + E   M+   + + +    I   ++     I  +
Sbjct: 85  SDTDLVRESVTMMENQRAYEANAAAIRAQDEMTGTFIDEM 124



 Score = 38.7 bits (88), Expect = 0.69,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 17/33 (51%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
          A  A   R +  ADN++N  T GFR+ +V    
Sbjct: 9  ALNAFSMRQAVTADNIANASTDGFRSREVVLET 41


>gi|50120636|ref|YP_049803.1| flagellar basal body rod protein FlgB [Pectobacterium
          atrosepticum SCRI1043]
 gi|49611162|emb|CAG74608.1| flagellar basal-body rod protein [Pectobacterium atrosepticum
          SCRI1043]
          Length = 138

 Score = 42.9 bits (99), Expect = 0.039,   Method: Composition-based stats.
 Identities = 11/65 (16%), Positives = 22/65 (33%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   +A N++N DT G++   + F+  +           + +A     +    
Sbjct: 15 ALNLRAQRQEILAANIANADTPGYQARDIDFASQLSKTMEQGRVNGTGIALKTTSVRHIP 74

Query: 71 GSFIS 75
               
Sbjct: 75 AQSFQ 79


>gi|117928046|ref|YP_872597.1| flagellar basal-body rod protein [Acidothermus cellulolyticus
          11B]
 gi|117648509|gb|ABK52611.1| flagellar basal-body rod protein [Acidothermus cellulolyticus
          11B]
          Length = 125

 Score = 42.9 bits (99), Expect = 0.039,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 27/72 (37%), Gaps = 3/72 (4%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
           +  + +A   A ++ L   ADN++N DT  F   +V F + + A     D   + + + 
Sbjct: 19 QALEVSIAGLSARQRAL---ADNVANIDTPNFLAKRVVFEDSLKAAIASGDPGAAQITTL 75

Query: 63 KEYLSKEVGSFI 74
                      
Sbjct: 76 TSLEPTNTNGNN 87


>gi|302387782|ref|YP_003823604.1| flagellar basal-body rod protein FlgC [Clostridium
          saccharolyticum WM1]
 gi|302198410|gb|ADL05981.1| flagellar basal-body rod protein FlgC [Clostridium
          saccharolyticum WM1]
          Length = 148

 Score = 42.9 bits (99), Expect = 0.040,   Method: Composition-based stats.
 Identities = 11/31 (35%), Positives = 17/31 (54%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32
           +S NI  +A  A   RL   ++N++N DT 
Sbjct: 4  LSSMNISASAMTAQRLRLDIASENIANIDTT 34



 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 6/42 (14%), Positives = 19/42 (45%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G+++  N + + E    +  T+ + +  T  +  +    +A+
Sbjct: 103 GYVQMPNVDLIKETVDSMSATRSYEANITAFNAIKFMASKAL 144


>gi|289548869|ref|YP_003473857.1| flagellar hook-associated protein FlgK [Thermocrinis albus DSM
           14484]
 gi|289182486|gb|ADC89730.1| flagellar hook-associated protein FlgK [Thermocrinis albus DSM
           14484]
          Length = 516

 Score = 42.9 bits (99), Expect = 0.040,   Method: Composition-based stats.
 Identities = 16/194 (8%), Positives = 49/194 (25%), Gaps = 6/194 (3%)

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109
            +         S      +   +       ++    G     ++ P G    R       
Sbjct: 323 GESGSITLVGVSSVTVSYQPSDTLQDIANIINAQNAGFTASVVQEPDGTYTLR--IVSSD 380

Query: 110 DDGSLVSASGKYP----VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
               +  ++G                  PQ   +    +     +   + +       D+
Sbjct: 381 PSYQITDSNGNIGVKVFTGTGLQDGGVNPQLPSLMGNLDYSVADRFFSLSSRWWEDLKDL 440

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225
            Q  V   +S  +       +E     ++     E    +   E  +++ L + + ++  
Sbjct: 441 YQKLVSDISSTQNTLKKQHEIEKALLDSLNARLSELQGVSIDQEFMEIMQLQRSYEALAK 500

Query: 226 LIDENEKSMLEAIR 239
            +   +  +   + 
Sbjct: 501 TVSAMDDLLRTTLN 514


>gi|298345988|ref|YP_003718675.1| flagellar basal body rod protein [Mobiluncus curtisii ATCC 43063]
 gi|304390254|ref|ZP_07372208.1| flagellar basal-body rod protein FlgC [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
 gi|315654575|ref|ZP_07907481.1| flagellar basal-body rod protein FlgC [Mobiluncus curtisii ATCC
           51333]
 gi|315657519|ref|ZP_07910401.1| flagellar basal-body rod protein FlgC [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
 gi|298236049|gb|ADI67181.1| flagellar basal body rod protein [Mobiluncus curtisii ATCC 43063]
 gi|304326736|gb|EFL93980.1| flagellar basal-body rod protein FlgC [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
 gi|315491039|gb|EFU80658.1| flagellar basal-body rod protein FlgC [Mobiluncus curtisii ATCC
           51333]
 gi|315491991|gb|EFU81600.1| flagellar basal-body rod protein FlgC [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
          Length = 132

 Score = 42.9 bits (99), Expect = 0.040,   Method: Composition-based stats.
 Identities = 12/111 (10%), Positives = 25/111 (22%), Gaps = 8/111 (7%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDI--DQK 55
           +  I         + L  ++DN++N +T        FR   V    V             
Sbjct: 6   AIGIAGTGMTVNRKWLDCISDNIANINTTKPMNEEAFRARYVVAQAVDYGRPAGTMVSGI 65

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106
                 G+        +    G      ++  +              +   
Sbjct: 66  ALGGTDGRIVYDPRDPNANEEGYVRHPDIDLGSQMTQLIMAQRAYQANAAV 116



 Score = 41.0 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 14/133 (10%), Positives = 32/133 (24%), Gaps = 6/133 (4%)

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
                G   +                           E              G  +  M 
Sbjct: 3   TFGAIGIAGTGMTVNRKWLDCISDNIANINTTKPMNEEAFRARYVVAQAVDYGRPAGTMV 62

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
            G       G     P  P  +        G++   + +   +M Q+I   + + +   +
Sbjct: 63  SGIALGGTDGRIVYDPRDPNANEE------GYVRHPDIDLGSQMTQLIMAQRAYQANAAV 116

Query: 227 IDENEKSMLEAIR 239
           +D  + +   A++
Sbjct: 117 VDRAKSTYEAALQ 129


>gi|153951647|ref|YP_001398768.1| flagellar hook-associated protein FlgK [Campylobacter jejuni
          subsp. doylei 269.97]
 gi|152939093|gb|ABS43834.1| putative flagellar hook-associated protein FlgK [Campylobacter
          jejuni subsp. doylei 269.97]
          Length = 608

 Score = 42.9 bits (99), Expect = 0.040,   Method: Composition-based stats.
 Identities = 8/36 (22%), Positives = 17/36 (47%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
             G+    A E +++T  +N+SN +   +   +V 
Sbjct: 7  LYTGVTGLKASEVQIATTGNNISNANATFYTRQRVV 42



 Score = 41.8 bits (96), Expect = 0.084,   Method: Composition-based stats.
 Identities = 5/48 (10%), Positives = 18/48 (37%)

Query: 191 GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
             +V   +   S  N+  E+  +I     + +   ++   ++ +   +
Sbjct: 557 YNSVYSEYQSKSGVNTNEELVALIQYQSSYGAAAKIVSTVDQMLDTLL 604


>gi|90021849|ref|YP_527676.1| hypothetical protein Sde_2204 [Saccharophagus degradans 2-40]
 gi|89951449|gb|ABD81464.1| Flagellar hook-associated protein [Saccharophagus degradans 2-40]
          Length = 920

 Score = 42.9 bits (99), Expect = 0.040,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 17/48 (35%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
            I +    A +  LST   N+SN +  G+   +V          +  
Sbjct: 6  LGISVTGLRASQSALSTTGHNISNANVDGYSRQRVIAETNPATRADGG 53



 Score = 36.0 bits (81), Expect = 4.5,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 48/168 (28%), Gaps = 6/168 (3%)

Query: 76  TGTELDFALEGDAWFALESPRGIIL---TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQ 132
           +G + D A+          P+  +L   T +   K    G  V+ SGK    D  ++   
Sbjct: 753 SGGKFDIAMADGVSLTTFPPQSRLLGDTTAEDFAKNRYMGIQVNLSGKPQAGDSFTLDFN 812

Query: 133 IPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP-LEDLSG 191
           I    +  +      I     V       S        R      S  I      + L  
Sbjct: 813 IDGAMDNRSALALVAIQSSNLVQGKSASLSESYGSLIERVGIDTSSSRINMEASKQVLEH 872

Query: 192 VTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            T  R  +  S  N   E   +I   Q +++   +I          I 
Sbjct: 873 TTAMRNSI--SAVNLDEEAANLIRFEQMYSANAQVISVARNLFDTLIN 918


>gi|78355402|ref|YP_386851.1| flagellar basal-body rod protein FlgC [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78217807|gb|ABB37156.1| flagellar basal-body rod protein FlgC [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
          Length = 146

 Score = 42.9 bits (99), Expect = 0.040,   Method: Composition-based stats.
 Identities = 6/42 (14%), Positives = 21/42 (50%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G+++  + N + EM  ++   + + +  + I+  +    +A+
Sbjct: 100 GYVKYPDINVVEEMANLMTSQRGYQASVSTIEAVKSMYTKAL 141



 Score = 37.2 bits (84), Expect = 2.2,   Method: Composition-based stats.
 Identities = 8/31 (25%), Positives = 16/31 (51%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32
           T+ +IG +A  A    ++  + N++N  T 
Sbjct: 4  MTALDIGASALSAERTSMNITSMNLANAKTT 34


>gi|289433988|ref|YP_003463860.1| flagellar basal-body rod protein FlgB [Listeria seeligeri serovar
           1/2b str. SLCC3954]
 gi|289170232|emb|CBH26772.1| flagellar basal-body rod protein FlgB [Listeria seeligeri serovar
           1/2b str. SLCC3954]
          Length = 133

 Score = 42.9 bits (99), Expect = 0.040,   Method: Composition-based stats.
 Identities = 10/104 (9%), Positives = 28/104 (26%)

Query: 12  QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
              L+     V++N++N +T  F+  +  F E +G+      Q            + +  
Sbjct: 12  LNYLQTANQVVSNNIANANTSNFKASETSFEESLGSSLRPSGQNNETTTGSLTKTNSKHL 71

Query: 72  SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115
           +                    +     + +        +    +
Sbjct: 72  TGTEIDQTNAKVTTKGGSINEDGNNVNVTSEMISLTKNNQMYAL 115


>gi|146278770|ref|YP_001168929.1| flagellar hook-associated protein FlgK [Rhodobacter sphaeroides
          ATCC 17025]
 gi|145557011|gb|ABP71624.1| flagellar hook-associated protein FlgK [Rhodobacter sphaeroides
          ATCC 17025]
          Length = 476

 Score = 42.9 bits (99), Expect = 0.040,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 26/77 (33%), Gaps = 3/77 (3%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
          + +  L+      + + T A+N++N  T GF   ++   EV         + +  V   +
Sbjct: 6  ALSSALSGLTVTSRGVETAANNIANALTEGFARREL---EVSARAYGGEGRGVRVVGVNR 62

Query: 64 EYLSKEVGSFISTGTEL 80
                VG         
Sbjct: 63 IIDMTLVGDRRLADAAT 79


>gi|294084420|ref|YP_003551178.1| flagellar basal-body rod protein FlgC [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292663993|gb|ADE39094.1| flagellar basal-body rod protein FlgC [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 138

 Score = 42.9 bits (99), Expect = 0.041,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 19/43 (44%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           GF+  +  N   E  +M+  ++++ +   ++      M+  I 
Sbjct: 93  GFVYSAAVNVEEEFVEMLEASRQYQNNIEVVTTLRALMMRTIN 135



 Score = 35.6 bits (80), Expect = 5.9,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 32/86 (37%), Gaps = 6/86 (6%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKI 56
            F+I   A  A   RL+T+A N++N   +       +R++K  F        ND     
Sbjct: 6  NVFDISGRAMAAQMVRLNTIASNLANAGNLASSEDEAYRSMKPVFETRFADNVNDSGMST 65

Query: 57 SFVASGKEYLSKEVGSFISTGTELDF 82
          + V    +   K    ++    + D 
Sbjct: 66 TQVVGVTKLSRKPERIYMPDHPKSDA 91


>gi|225375314|ref|ZP_03752535.1| hypothetical protein ROSEINA2194_00939 [Roseburia inulinivorans
          DSM 16841]
 gi|225212803|gb|EEG95157.1| hypothetical protein ROSEINA2194_00939 [Roseburia inulinivorans
          DSM 16841]
          Length = 131

 Score = 42.9 bits (99), Expect = 0.041,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 21/40 (52%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50
          A  A   R + + +N++NTDT G++  +V F  V+     
Sbjct: 16 AADASWLRETAIMNNLANTDTPGYKRQEVDFESVLQRELG 55


>gi|331007440|ref|ZP_08330617.1| Flagellar hook-associated protein flgK [gamma proteobacterium
          IMCC1989]
 gi|330418747|gb|EGG93236.1| Flagellar hook-associated protein flgK [gamma proteobacterium
          IMCC1989]
          Length = 1062

 Score = 42.9 bits (99), Expect = 0.041,   Method: Composition-based stats.
 Identities = 8/46 (17%), Positives = 18/46 (39%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50
            + ++     +  L TV  N++N +T G+       + + G    
Sbjct: 6  LGVSISGLRVSQNALRTVGHNIANANTAGYTRQSTDINSMGGTQTG 51


>gi|311280011|ref|YP_003942242.1| flagellar hook-associated protein FlgK [Enterobacter cloacae
          SCF1]
 gi|308749206|gb|ADO48958.1| flagellar hook-associated protein FlgK [Enterobacter cloacae
          SCF1]
          Length = 547

 Score = 42.9 bits (99), Expect = 0.041,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 23/52 (44%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+TV++N+++ +  G+       ++    +    
Sbjct: 1  MSSLINSAMSGLGAAQAALNTVSNNIASYNVSGYTRQTTVLAQSNSTLGPGG 52


>gi|291334310|gb|ADD93971.1| predicted flagellar proximal rod protein [uncultured marine
           bacterium MedDCM-OCT-S09-C247]
          Length = 138

 Score = 42.9 bits (99), Expect = 0.041,   Method: Composition-based stats.
 Identities = 6/43 (13%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++  +  N+  E+ +M+  ++++ +   ++      M+  I 
Sbjct: 93  GYIYMAAVNTEEELVEMLEASRQYENNVEVVSTLRGLMMRTIS 135



 Score = 41.4 bits (95), Expect = 0.12,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 28/85 (32%), Gaps = 6/85 (7%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKI 56
            F++      A   RL+TVA N++N  +V       +R IK  FS +            
Sbjct: 6  NIFDVAARGMSAQMVRLNTVASNLANARSVASSEAEAYRAIKPVFSTLYADDLERSGVSS 65

Query: 57 SFVASGKEYLSKEVGSFISTGTELD 81
            V        +    +     + D
Sbjct: 66 VDVVDIVAVDREPEKVYQPGHPKAD 90


>gi|225619784|ref|YP_002721041.1| flagellar basal body rod protein FlgB [Brachyspira hyodysenteriae
          WA1]
 gi|225214603|gb|ACN83337.1| flagellar basal body rod protein FlgB [Brachyspira hyodysenteriae
          WA1]
          Length = 142

 Score = 42.9 bits (99), Expect = 0.041,   Method: Composition-based stats.
 Identities = 9/64 (14%), Positives = 16/64 (25%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
                R   +ADN++N  T  F+   V F   +    +  +                  
Sbjct: 20 LNVYGLRAEVIADNIANVSTPNFKRSDVTFEYQLARALDSENYNGMEAKRTDSRHFPFHM 79

Query: 72 SFIS 75
              
Sbjct: 80 PMDY 83


>gi|239826610|ref|YP_002949234.1| flagellar basal body rod protein FlgB [Geobacillus sp. WCH70]
 gi|239806903|gb|ACS23968.1| flagellar basal-body rod protein FlgB [Geobacillus sp. WCH70]
          Length = 130

 Score = 42.9 bits (99), Expect = 0.041,   Method: Composition-based stats.
 Identities = 9/60 (15%), Positives = 21/60 (35%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
                 R   +A+N++N DT  ++  +V+F   +      ++ K +             
Sbjct: 14 GLDYASLREKVIANNIANVDTPNYKAKEVRFRAELDRALQPLEAKRTNPKHLPFTRPMTN 73


>gi|242277990|ref|YP_002990119.1| flagellar hook-associated protein FlgK [Desulfovibrio salexigens
          DSM 2638]
 gi|242120884|gb|ACS78580.1| flagellar hook-associated protein FlgK [Desulfovibrio salexigens
          DSM 2638]
          Length = 694

 Score = 42.9 bits (99), Expect = 0.042,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 1/47 (2%)

Query: 1  MQ-TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46
          M    F+IG  A    +  LS   +N++N  T G+R   V   E + 
Sbjct: 1  MLGNIFSIGRGAMQNAQIGLSVHGNNVANLKTPGYRRRTVIQDESMS 47


>gi|299534790|ref|ZP_07048120.1| flagellar basal body rod protein FlgB [Lysinibacillus fusiformis
          ZC1]
 gi|298729878|gb|EFI70423.1| flagellar basal body rod protein FlgB [Lysinibacillus fusiformis
          ZC1]
          Length = 130

 Score = 42.9 bits (99), Expect = 0.042,   Method: Composition-based stats.
 Identities = 11/78 (14%), Positives = 29/78 (37%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69
                     T+A+N++N DT  ++   V F +++   K+             ++  ++
Sbjct: 13 NGLSYATLNHKTIANNIANVDTPNYKAKNVSFKDMLEEQKSIAISAYRTDNRHYDFTFRQ 72

Query: 70 VGSFISTGTELDFALEGD 87
              ++    L +   G+
Sbjct: 73 ATPGVNIVENLRYRNNGN 90


>gi|152990394|ref|YP_001356116.1| flagellar hook-associated protein 1 FliK [Nitratiruptor sp.
          SB155-2]
 gi|151422255|dbj|BAF69759.1| flagellar hook-associated protein 1 FliK [Nitratiruptor sp.
          SB155-2]
          Length = 596

 Score = 42.9 bits (99), Expect = 0.043,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 22/44 (50%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44
          M  + N      L  ++ +  V +N++N +T G+  ++  FS +
Sbjct: 11 MANALNNISQTLLQNQKAIDIVNNNIANLNTEGYSRVEAGFSSL 54



 Score = 40.2 bits (92), Expect = 0.28,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 15/37 (40%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N   E+ ++  L + + +   ++   ++     I
Sbjct: 556 SGVNLDEELVKLTQLQRSYQATARVMMVTDELFKTLI 592


>gi|302384099|ref|YP_003819922.1| flagellar basal-body rod protein FlgC [Brevundimonas
          subvibrioides ATCC 15264]
 gi|302194727|gb|ADL02299.1| flagellar basal-body rod protein FlgC [Brevundimonas
          subvibrioides ATCC 15264]
          Length = 144

 Score = 42.5 bits (98), Expect = 0.044,   Method: Composition-based stats.
 Identities = 8/49 (16%), Positives = 21/49 (42%), Gaps = 7/49 (14%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSE 43
           ++  +  +A  A + R+  +A+N++N ++         +R     F  
Sbjct: 14 NSAMAVAASALTAQQSRMRIIAENIANAESTARTAGGQPYRRQIPVFEA 62



 Score = 40.2 bits (92), Expect = 0.22,   Method: Composition-based stats.
 Identities = 6/42 (14%), Positives = 16/42 (38%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   N +S+ E   M    + + +   +I+         +
Sbjct: 98  GYVLRPNVDSLIESMDMREAQRAYEANLNVIETARTMESRTL 139


>gi|229017032|ref|ZP_04173952.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH1273]
 gi|229023213|ref|ZP_04179724.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH1272]
 gi|228738138|gb|EEL88623.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH1272]
 gi|228744303|gb|EEL94385.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH1273]
          Length = 137

 Score = 42.5 bits (98), Expect = 0.044,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 22/40 (55%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           G++   N N   EM  ++   + + + T++++ N+K + +
Sbjct: 91  GYVRYPNINVTAEMTNVMVAQKMYEANTSVLNANKKMLDK 130



 Score = 42.2 bits (97), Expect = 0.057,   Method: Composition-based stats.
 Identities = 7/33 (21%), Positives = 15/33 (45%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG 33
          M  + N   +A     + +   ++N+ N +T G
Sbjct: 1  MFQAINASGSALTTARKWMEVTSNNIVNANTTG 33


>gi|315301962|ref|ZP_07872958.1| flagellar basal-body rod protein FlgB [Listeria ivanovii FSL
           F6-596]
 gi|313629669|gb|EFR97806.1| flagellar basal-body rod protein FlgB [Listeria ivanovii FSL
           F6-596]
          Length = 133

 Score = 42.5 bits (98), Expect = 0.044,   Method: Composition-based stats.
 Identities = 10/104 (9%), Positives = 28/104 (26%)

Query: 12  QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
              L+     V++N++N +T  F+  +  F E +G+      Q            + +  
Sbjct: 12  LNYLQTANQVVSNNIANANTSNFKASETSFEESLGSSLRPSGQNNEATTGSLTKTNSKHL 71

Query: 72  SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115
           +                    +     + +        +    +
Sbjct: 72  AGTEIDQTNAKVTTKGGSINEDGNNVNVTSEMISLTKNNQMYAL 115


>gi|169827117|ref|YP_001697275.1| flagellar basal body rod protein FlgB [Lysinibacillus sphaericus
          C3-41]
 gi|168991605|gb|ACA39145.1| Flagellar basal-body rod protein [Lysinibacillus sphaericus
          C3-41]
          Length = 130

 Score = 42.5 bits (98), Expect = 0.044,   Method: Composition-based stats.
 Identities = 12/78 (15%), Positives = 28/78 (35%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69
                     T+A+N++N DT  ++   V F E++   K              ++  ++
Sbjct: 13 NGLSYATLNHKTIANNIANVDTPNYKAKNVSFKEMLAEQKGIAISAYRTDNRHYDFTIRQ 72

Query: 70 VGSFISTGTELDFALEGD 87
              ++    L +   G+
Sbjct: 73 STPGVNNIENLRYRNNGN 90


>gi|283782090|ref|YP_003372845.1| flagellar basal-body rod protein FlgC [Pirellula staleyi DSM
          6068]
 gi|283440543|gb|ADB18985.1| flagellar basal-body rod protein FlgC [Pirellula staleyi DSM
          6068]
          Length = 141

 Score = 42.5 bits (98), Expect = 0.044,   Method: Composition-based stats.
 Identities = 10/29 (34%), Positives = 18/29 (62%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNT 29
          M T+ +I  +A +A   RL T++ N++N 
Sbjct: 1  MHTALDISTSALVAQRIRLDTISSNLANM 29



 Score = 40.2 bits (92), Expect = 0.23,   Method: Composition-based stats.
 Identities = 5/48 (10%), Positives = 20/48 (41%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           ++G++     N   E    +  T+ + +   +++  +    + +R + 
Sbjct: 94  RKGYVAYPRINQTAEFVDALVATRAYEANVGVMEITKNMSQQTLRILG 141


>gi|225569965|ref|ZP_03778990.1| hypothetical protein CLOHYLEM_06060 [Clostridium hylemonae DSM
           15053]
 gi|225161435|gb|EEG74054.1| hypothetical protein CLOHYLEM_06060 [Clostridium hylemonae DSM
           15053]
          Length = 134

 Score = 42.5 bits (98), Expect = 0.044,   Method: Composition-based stats.
 Identities = 6/41 (14%), Positives = 17/41 (41%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
           G++   N + + E    +  T+ + +  T  +  +    +A
Sbjct: 89  GYVRMPNVDMIKETTDAMAATRSYEANITAFNAVKLMAQKA 129


>gi|319944129|ref|ZP_08018407.1| flagellar hook-associated protein [Lautropia mirabilis ATCC
          51599]
 gi|319742623|gb|EFV95032.1| flagellar hook-associated protein [Lautropia mirabilis ATCC
          51599]
          Length = 628

 Score = 42.5 bits (98), Expect = 0.045,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 26/83 (31%), Gaps = 1/83 (1%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M     IG +A  A   +L T   N++N  T G+   +V+ +   G          + V 
Sbjct: 1  MAGLIQIGQSALAAAYTQLQTGGHNIANVHTPGYVRQEVQLATAGGQYHGH-GYIGNGVE 59

Query: 61 SGKEYLSKEVGSFISTGTELDFA 83
                + +             A
Sbjct: 60 VQDVRRAYDRFMADEVTRSTSLA 82



 Score = 41.0 bits (94), Expect = 0.14,   Method: Composition-based stats.
 Identities = 17/133 (12%), Positives = 42/133 (31%), Gaps = 3/133 (2%)

Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165
           F V  +G  ++ SG+  + D+  +  +   + +  N  E   ++ +  V       +   
Sbjct: 495 FNVEANGWTLTLSGRPAMGDVLEMKKRSAPRQDNANAREMTLLADRHNVDGATFSQAFAS 554

Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225
               V         +   +        TV       S  N   E  +++   Q + +   
Sbjct: 555 LLSDVGSRALQAKTSEKASAKMLEGAKTVLAN---RSGVNLDEEAARLLQYRQAYQAAAK 611

Query: 226 LIDENEKSMLEAI 238
           +I   ++     +
Sbjct: 612 VIQTADEMFNSIL 624


>gi|90411002|ref|ZP_01219016.1| flagellar basal body protein [Photobacterium profundum 3TCK]
 gi|90328215|gb|EAS44526.1| flagellar basal body protein [Photobacterium profundum 3TCK]
          Length = 131

 Score = 42.5 bits (98), Expect = 0.045,   Method: Composition-based stats.
 Identities = 9/37 (24%), Positives = 20/37 (54%)

Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
          +R  T+A N++N +T G++   + F   + A  +  +
Sbjct: 21 KRAETLASNIANANTPGYKAKDMDFDRALKAATSGAN 57


>gi|222112269|ref|YP_002554533.1| flagellar basal-body rod protein flgb [Acidovorax ebreus TPSY]
 gi|221731713|gb|ACM34533.1| flagellar basal-body rod protein FlgB [Acidovorax ebreus TPSY]
          Length = 138

 Score = 42.5 bits (98), Expect = 0.045,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 30/71 (42%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69
          +A L   +R   +A N++N DT G+     KF++ + A+    +       S  +     
Sbjct: 14 SALLLRSERQRAIASNIANADTPGYVARDFKFADAMRAVNEAHNPSPLRSQSVSDPRHIP 73

Query: 70 VGSFISTGTEL 80
          + +  S  ++ 
Sbjct: 74 LPAAASGSSDS 84


>gi|213417746|ref|ZP_03350864.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Typhi str. E01-6750]
          Length = 88

 Score = 42.5 bits (98), Expect = 0.045,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 26/66 (39%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   +A N++N DT G++   + F+  +  +     ++   VA          
Sbjct: 15 ALNLRAQRQEILAANIANADTPGYQARDIDFASELKKVMVRGREETGGVALSLTSSRHIP 74

Query: 71 GSFIST 76
             +S+
Sbjct: 75 AQAVSS 80


>gi|319649570|ref|ZP_08003726.1| flagellar basal-body rod protein B [Bacillus sp. 2_A_57_CT2]
 gi|317398732|gb|EFV79414.1| flagellar basal-body rod protein B [Bacillus sp. 2_A_57_CT2]
          Length = 131

 Score = 42.5 bits (98), Expect = 0.045,   Method: Composition-based stats.
 Identities = 7/92 (7%), Positives = 24/92 (26%)

Query: 16  EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIS 75
             +   ++ N++N DT  ++     F E   +      +         ++ +    +   
Sbjct: 19  SLKQKVISQNIANADTPNYKAKDASFKEAFQSALEGSMEANKSDIRHYDFKNGLSSAQGV 78

Query: 76  TGTELDFALEGDAWFALESPRGIILTRDGRFK 107
                           ++     + T    + 
Sbjct: 79  ITKRNASYNHNGNSVDVDKEMAELATNQIYYN 110


>gi|302878273|ref|YP_003846837.1| flagellar basal-body rod protein FlgB [Gallionella
          capsiferriformans ES-2]
 gi|302581062|gb|ADL55073.1| flagellar basal-body rod protein FlgB [Gallionella
          capsiferriformans ES-2]
          Length = 134

 Score = 42.5 bits (98), Expect = 0.046,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 23/64 (35%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
            S +    A      R   +A N++N DT G++   + F+  +         K+    S
Sbjct: 6  DESLHFNQTALSLRGARQELLASNIANADTPGYKARDINFASALQNALAGTSVKLPMATS 65

Query: 62 GKEY 65
             +
Sbjct: 66 SAMH 69


>gi|220905030|ref|YP_002480342.1| hypothetical protein Ddes_1767 [Desulfovibrio desulfuricans
          subsp. desulfuricans str. ATCC 27774]
 gi|219869329|gb|ACL49664.1| protein of unknown function DUF1078 domain protein [Desulfovibrio
          desulfuricans subsp. desulfuricans str. ATCC 27774]
          Length = 133

 Score = 42.5 bits (98), Expect = 0.046,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 21/53 (39%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54
           TS  +G +A       ++  A N++N  T GF   +  ++         +D 
Sbjct: 5  NTSMQLGASAMNTHSWGMAVSAHNVANVSTPGFEPQRAVYATGPAGQGVRLDA 57



 Score = 42.5 bits (98), Expect = 0.049,   Method: Composition-based stats.
 Identities = 7/37 (18%), Positives = 13/37 (35%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N   EM  MI     + +  T +   +  +   +
Sbjct: 93  SGTNLAREMVSMISTQHAYKANATTVRTADAMLGTLL 129


>gi|203287754|ref|YP_002222769.1| flagellar basal-body rod protein [Borrelia recurrentis A1]
 gi|201084974|gb|ACH94548.1| flagellar basal-body rod protein [Borrelia recurrentis A1]
          Length = 135

 Score = 42.5 bits (98), Expect = 0.046,   Method: Composition-based stats.
 Identities = 13/26 (50%), Positives = 16/26 (61%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSE 43
          R S VADN++N DT  F+  KV F  
Sbjct: 21 RQSVVADNIANVDTPNFKRSKVTFEA 46


>gi|167770222|ref|ZP_02442275.1| hypothetical protein ANACOL_01565 [Anaerotruncus colihominis DSM
          17241]
 gi|167667544|gb|EDS11674.1| hypothetical protein ANACOL_01565 [Anaerotruncus colihominis DSM
          17241]
          Length = 145

 Score = 42.5 bits (98), Expect = 0.046,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 6/48 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43
            S +I  +A  A   R+ T+  N++N++T     G  +R  +V F E
Sbjct: 4  MKSMDIVGSALTAERFRMDTILQNIANSNTTRTPEGEPYRRKQVVFQE 51



 Score = 37.2 bits (84), Expect = 2.0,   Method: Composition-based stats.
 Identities = 8/46 (17%), Positives = 20/46 (43%), Gaps = 1/46 (2%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G++   N N   E   ++  +  +++  T +   +   L+A+  I 
Sbjct: 99  GYVMYPNVNLTEERVDLMAASNAYDANLTALAVVKSLALKAL-EIG 143


>gi|89092133|ref|ZP_01165088.1| Flagellar basal-body rod protein FlgB [Oceanospirillum sp. MED92]
 gi|89083868|gb|EAR63085.1| Flagellar basal-body rod protein FlgB [Oceanospirillum sp. MED92]
          Length = 131

 Score = 42.5 bits (98), Expect = 0.046,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 4/49 (8%)

Query: 1  MQTSFNIGLA----AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV 45
          M  SF+  L     A L   +R   +A+N++N DT  F+   ++F+  +
Sbjct: 1  MAISFDAALGIHDDALLHRARRAEVLANNIANADTPNFKARDMEFAHAL 49


>gi|313634360|gb|EFS00957.1| flagellar basal-body rod protein FlgB [Listeria seeligeri FSL
           N1-067]
          Length = 133

 Score = 42.5 bits (98), Expect = 0.047,   Method: Composition-based stats.
 Identities = 10/104 (9%), Positives = 28/104 (26%)

Query: 12  QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
              L+     V++N++N +T  F+  +  F E +G+      Q            + +  
Sbjct: 12  LNYLQTANQVVSNNIANANTSNFKASETSFEESLGSSLRPSGQNNETTTGSLTKTNSKHL 71

Query: 72  SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115
           +                    +     + +        +    +
Sbjct: 72  TGTEIDQTNAKVTNKGGSINEDGNNVNVTSEMISLTKNNQMYAL 115


>gi|157961168|ref|YP_001501202.1| flagellar basal body rod protein FlgB [Shewanella pealeana ATCC
          700345]
 gi|157846168|gb|ABV86667.1| flagellar basal-body rod protein FlgB [Shewanella pealeana ATCC
          700345]
          Length = 132

 Score = 42.5 bits (98), Expect = 0.047,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 25/59 (42%)

Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFI 74
           QR   ++ N++N DT G++   V FS+ + A ++         +  K +    +    
Sbjct: 20 SQRAEILSSNIANADTPGYKARDVDFSKAMNAAQSQQTGLAMAKSDSKHFDMAALTQQH 78


>gi|85859203|ref|YP_461405.1| flagellar hook-associated protein 1 [Syntrophus aciditrophicus
          SB]
 gi|85722294|gb|ABC77237.1| flagellar hook-associated protein 1 [Syntrophus aciditrophicus
          SB]
          Length = 463

 Score = 42.5 bits (98), Expect = 0.047,   Method: Composition-based stats.
 Identities = 9/34 (26%), Positives = 16/34 (47%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44
          A  + +  +     N+SN +T G+   +  FS V
Sbjct: 14 ALSSFQAAIDITGSNISNVNTPGYSRQRPVFSSV 47


>gi|109947182|ref|YP_664410.1| flagellar hook-associated protein FlgK [Helicobacter acinonychis
           str. Sheeba]
 gi|109714403|emb|CAJ99411.1| flgK [Helicobacter acinonychis str. Sheeba]
          Length = 606

 Score = 42.5 bits (98), Expect = 0.047,   Method: Composition-based stats.
 Identities = 23/213 (10%), Positives = 58/213 (27%), Gaps = 16/213 (7%)

Query: 28  NTDTVGFRTIKVK--FSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALE 85
           N +T   +    +  F +   A  N+  +K                    T      AL+
Sbjct: 404 NANTDDNKDNNAENDFDDYFTASFNNETKKFIIQPKNASQGLFVSMKDNGTNFMG--ALK 461

Query: 86  GDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEK 145
            + +F  +    I L ++ + + T                  +          +    + 
Sbjct: 462 LNPFFQGDDASTISLNKEYKKEPTTIR------------PWLAPINGNFDVANMMQQLQY 509

Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNAN 205
             +           +   +  Q    + N+    +      +     T+K+  L  S  +
Sbjct: 510 DSVDFYNDKFDIKQMKISEFYQFLTSKINTDAEKSGRILDTKKSMLETIKKEQLSISQVS 569

Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
              EM  +I     + +   +I   ++ +   +
Sbjct: 570 VDEEMVNLIKFQSGYAANAKVITAIDRMIDTLL 602



 Score = 38.7 bits (88), Expect = 0.68,   Method: Composition-based stats.
 Identities = 6/29 (20%), Positives = 11/29 (37%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTD 30
           +S N       A +  +    +N+SN  
Sbjct: 5  LSSLNTSYTGLQAHQSMVDVTGNNISNAS 33


>gi|170743259|ref|YP_001771914.1| flagellar basal body rod protein FlgB [Methylobacterium sp. 4-46]
 gi|168197533|gb|ACA19480.1| flagellar basal body rod protein [Methylobacterium sp. 4-46]
          Length = 133

 Score = 42.5 bits (98), Expect = 0.048,   Method: Composition-based stats.
 Identities = 7/29 (24%), Positives = 14/29 (48%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIK 38
                + R   +A+N++N +T GF+   
Sbjct: 14 NRMQWHQTRQKVLAENVANANTPGFKARD 42


>gi|203284215|ref|YP_002221955.1| flagellar basal-body rod protein [Borrelia duttonii Ly]
 gi|201083658|gb|ACH93249.1| flagellar basal-body rod protein [Borrelia duttonii Ly]
          Length = 135

 Score = 42.5 bits (98), Expect = 0.048,   Method: Composition-based stats.
 Identities = 13/26 (50%), Positives = 16/26 (61%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSE 43
          R S VADN++N DT  F+  KV F  
Sbjct: 21 RQSVVADNIANVDTPNFKRSKVTFEA 46


>gi|54308103|ref|YP_129123.1| flagellar hook-associated protein FlgK [Photobacterium profundum
          SS9]
 gi|46912529|emb|CAG19321.1| hypothetical flagellar hook-associated protein FlgM
          [Photobacterium profundum SS9]
          Length = 626

 Score = 42.5 bits (98), Expect = 0.048,   Method: Composition-based stats.
 Identities = 16/94 (17%), Positives = 33/94 (35%), Gaps = 2/94 (2%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS--EVVGAIKNDIDQKISFVASG 62
           N+G    L  +++L+T + N++N +T G+    V     + +    +     +      
Sbjct: 6  LNMGSQGLLTAQRQLNTTSHNINNVNTEGYSRQSVVQQTNDPIWWGGSQHGTGVHAAEVR 65

Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESPR 96
          + Y          T T L +A E +         
Sbjct: 66 RGYDQFATNELNLTTTNLSYATEREGQLGRLDNM 99



 Score = 36.0 bits (81), Expect = 4.5,   Method: Composition-based stats.
 Identities = 13/131 (9%), Positives = 37/131 (28%), Gaps = 5/131 (3%)

Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS-----VDMSQG 168
            V+  G    L   ++   +   +     G  G + +   + A   +       +D+ +G
Sbjct: 494 EVNVGGTRFTLSSGAMGGDVFAVNLNAADGNNGNLIKMQDLQAQKIMNDGRSSVIDVYEG 553

Query: 169 FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228
                    +       +  +     +    E    N   E   M+   Q + + + ++ 
Sbjct: 554 LNTEMGVQKASASRLKEVGLVEKDAAQSRVAEIGGVNMDEEAANMMKFQQAYMASSRIMS 613

Query: 229 ENEKSMLEAIR 239
               +    + 
Sbjct: 614 VANDTFDTLLN 624


>gi|220932528|ref|YP_002509436.1| flagellar basal-body rod protein FlgB [Halothermothrix orenii H
          168]
 gi|219993838|gb|ACL70441.1| flagellar basal-body rod protein FlgB [Halothermothrix orenii H
          168]
          Length = 131

 Score = 42.5 bits (98), Expect = 0.048,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 19/41 (46%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51
                +R   +ADN++N DT  ++   V F   + +I + 
Sbjct: 11 GLDGASKRHRALADNIANVDTPNYKRKDVDFVSTLKSIASQ 51


>gi|328948264|ref|YP_004365601.1| flagellar hook-associated protein FlgK [Treponema succinifaciens
           DSM 2489]
 gi|328448588|gb|AEB14304.1| flagellar hook-associated protein FlgK [Treponema succinifaciens
           DSM 2489]
          Length = 623

 Score = 42.5 bits (98), Expect = 0.049,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 14/41 (34%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E+  +I     +N     I   ++ +   I  + 
Sbjct: 582 SGVNIDEELADIIKFQHGYNVAAKFISVQDELLDTLINRLG 622



 Score = 37.5 bits (85), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 20/52 (38%), Gaps = 3/52 (5%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDI 52
             IG  + +A   ++ T   N+SN DT G+   +V    F  +        
Sbjct: 7  GIEIGKRSLMAHSTQIQTAGHNISNADTEGYSRQRVIVKSFEPIYRPDLERA 58


>gi|114797235|ref|YP_759001.1| flagellar basal-body rod protein [Hyphomonas neptunium ATCC
          15444]
 gi|114737409|gb|ABI75534.1| flagellar basal-body rod protein [Hyphomonas neptunium ATCC
          15444]
          Length = 128

 Score = 42.5 bits (98), Expect = 0.049,   Method: Composition-based stats.
 Identities = 10/71 (14%), Positives = 24/71 (33%)

Query: 8  GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLS 67
           +A      +R+   A+N+SN DT G++   +   +   +           +   +    
Sbjct: 11 AVAGMELQSRRMGVTAENISNADTPGYKRKLLMVEQSQLSSGEQFMASRVQLDEAEAKRD 70

Query: 68 KEVGSFISTGT 78
                ++ G 
Sbjct: 71 YNPEHPMADGE 81



 Score = 42.2 bits (97), Expect = 0.060,   Method: Composition-based stats.
 Identities = 6/46 (13%), Positives = 16/46 (34%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G++  SN + + EM  M    + + +      +        +  + 
Sbjct: 82  GYVTLSNVSIVTEMADMREANRSYEANLNSFQQARSMYRSLLDILR 127


>gi|90411011|ref|ZP_01219025.1| flagellar hook-associated protein [Photobacterium profundum 3TCK]
 gi|90328224|gb|EAS44535.1| flagellar hook-associated protein [Photobacterium profundum 3TCK]
          Length = 626

 Score = 42.5 bits (98), Expect = 0.050,   Method: Composition-based stats.
 Identities = 16/94 (17%), Positives = 33/94 (35%), Gaps = 2/94 (2%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS--EVVGAIKNDIDQKISFVASG 62
           N+G    L  +++L+T + N++N +T G+    V     + +    +     +      
Sbjct: 6  LNMGSQGLLTAQRQLNTTSHNINNVNTEGYSRQSVVQQTNDPIWWGGSQHGTGVHAAEVR 65

Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESPR 96
          + Y          T T L +A E +         
Sbjct: 66 RGYDQFATNELNLTTTNLSYATEREGQLGRLDNM 99



 Score = 37.2 bits (84), Expect = 2.3,   Method: Composition-based stats.
 Identities = 11/116 (9%), Positives = 33/116 (28%)

Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183
           +      + +   D       K +  Q  K++       +D+ +G         +     
Sbjct: 509 MGGDVFAVNLNASDGDNGNLIKMQDLQSQKIMNDGRSSVIDVYEGLNTEMGVQKASASRL 568

Query: 184 TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
             +  +     +    E +  N   E   M+   Q + + + ++     +    + 
Sbjct: 569 KEVGLVEKDAAQSRVAEIAGVNMDEEAANMMKFQQAYMASSRIMSVANDTFDTLLN 624


>gi|208435016|ref|YP_002266682.1| flagellar hook-associated protein 1 [Helicobacter pylori G27]
 gi|208432945|gb|ACI27816.1| flagellar hook-associated protein 1 [Helicobacter pylori G27]
          Length = 606

 Score = 42.5 bits (98), Expect = 0.050,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 14/37 (37%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  +   EM  +I     + +   +I   ++ +   +
Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLL 602



 Score = 38.7 bits (88), Expect = 0.67,   Method: Composition-based stats.
 Identities = 6/29 (20%), Positives = 11/29 (37%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTD 30
           +S N       A +  +    +N+SN  
Sbjct: 5  LSSLNTSYTGLQAHQSMVDVTGNNISNAS 33


>gi|317182372|dbj|BAJ60156.1| flagellar hook-associated protein FlgK [Helicobacter pylori F57]
          Length = 606

 Score = 42.5 bits (98), Expect = 0.051,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 14/37 (37%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  +   EM  +I     + +   +I   ++ +   +
Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLL 602



 Score = 36.8 bits (83), Expect = 2.6,   Method: Composition-based stats.
 Identities = 6/29 (20%), Positives = 11/29 (37%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTD 30
           +S N       A +  +    +N+SN  
Sbjct: 5  LSSLNASYTGLQAHQSMVDVTGNNISNAS 33


>gi|308183223|ref|YP_003927350.1| flagellar hook-associated protein FlgK [Helicobacter pylori PeCan4]
 gi|308065408|gb|ADO07300.1| flagellar hook-associated protein FlgK [Helicobacter pylori PeCan4]
          Length = 606

 Score = 42.5 bits (98), Expect = 0.051,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 14/37 (37%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  +   EM  +I     + +   +I   ++ +   +
Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLL 602



 Score = 38.7 bits (88), Expect = 0.67,   Method: Composition-based stats.
 Identities = 6/29 (20%), Positives = 11/29 (37%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTD 30
           +S N       A +  +    +N+SN  
Sbjct: 5  LSSLNTSYTGLQAHQSMVDVTGNNISNAS 33


>gi|261839850|gb|ACX99615.1| flagellar hook-associated protein FlgK [Helicobacter pylori 52]
          Length = 606

 Score = 42.5 bits (98), Expect = 0.051,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 14/37 (37%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  +   EM  +I     + +   +I   ++ +   +
Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLL 602



 Score = 36.8 bits (83), Expect = 2.6,   Method: Composition-based stats.
 Identities = 6/29 (20%), Positives = 11/29 (37%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTD 30
           +S N       A +  +    +N+SN  
Sbjct: 5  LSSLNASYTGLQAHQSMVDVTGNNISNAS 33


>gi|149195180|ref|ZP_01872271.1| flagellar basal-body rod protein B [Caminibacter mediatlanticus
           TB-2]
 gi|149134732|gb|EDM23217.1| flagellar basal-body rod protein B [Caminibacter mediatlanticus
           TB-2]
          Length = 142

 Score = 42.5 bits (98), Expect = 0.051,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 25/81 (30%)

Query: 18  RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTG 77
           R   +A N++N DT  +R   ++F + +    N    K S      +     +       
Sbjct: 22  RQDMIASNIANADTPFYRPKDIRFEDALQEEINKKFNKPSKKLELAKTNPMHLEPKDIED 81

Query: 78  TELDFALEGDAWFALESPRGI 98
           +        D   A      +
Sbjct: 82  SYKPIVFFRDGHLARNDGNSV 102


>gi|15645733|ref|NP_207910.1| flagellar hook-associated protein FlgK [Helicobacter pylori 26695]
 gi|2314271|gb|AAD08163.1| flagellar hook-associated protein 1 (HAP1) (flgK) [Helicobacter
           pylori 26695]
          Length = 606

 Score = 42.5 bits (98), Expect = 0.051,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 14/37 (37%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  +   EM  +I     + +   +I   ++ +   +
Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLL 602



 Score = 38.7 bits (88), Expect = 0.68,   Method: Composition-based stats.
 Identities = 6/29 (20%), Positives = 11/29 (37%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTD 30
           +S N       A +  +    +N+SN  
Sbjct: 5  LSSLNTSYTGLQAHQSMVDVTGNNISNAS 33


>gi|27904801|ref|NP_777927.1| flagellar basal-body rod protein Flgb [Buchnera aphidicola str. Bp
           (Baizongia pistaciae)]
 gi|46395819|sp|Q89AI0|FLGB_BUCBP RecName: Full=Flagellar basal-body rod protein flgB
 gi|27904199|gb|AAO27032.1| flagellar basal-body rod protein Flgb [Buchnera aphidicola str. Bp
           (Baizongia pistaciae)]
          Length = 136

 Score = 42.5 bits (98), Expect = 0.051,   Method: Composition-based stats.
 Identities = 12/97 (12%), Positives = 34/97 (35%)

Query: 12  QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
                 R   +A N++N +T G ++  + FS+  G + ++  Q      +          
Sbjct: 16  LNLHAYRQEILASNIANANTPGHKSSDINFSKTFGKLFSNALQGKKNNLTTTSNKHISNN 75

Query: 72  SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108
             +      +  ++ +++ +  +   I + R      
Sbjct: 76  DNVELSNYDEQTVKNNSYVSKNNAINIDVDRINFVHN 112


>gi|27380964|ref|NP_772493.1| hypothetical protein bll5853 [Bradyrhizobium japonicum USDA 110]
 gi|27354130|dbj|BAC51118.1| bll5853 [Bradyrhizobium japonicum USDA 110]
          Length = 627

 Score = 42.5 bits (98), Expect = 0.051,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 28/73 (38%)

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
           Q F+  + +  +        + +   T++  F   S+ N   EM  +I L   + +   +
Sbjct: 552 QQFLSIQGNAATQATQLQQGQSVVVSTLQAKFNSTSSVNLDSEMSNLIQLQNAYAANAHV 611

Query: 227 IDENEKSMLEAIR 239
           +   +  M   I+
Sbjct: 612 MSVVQSMMNTLIQ 624



 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 18/32 (56%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGF 34
          ++    ++   A +  LS V+ N++N+ T G+
Sbjct: 5  SALASAMSGLRANQAALSIVSSNVANSQTPGY 36


>gi|254779670|ref|YP_003057776.1| flagellar hook-associated protein FlgK [Helicobacter pylori B38]
 gi|254001582|emb|CAX29629.1| Flagellar hook-associated protein 1 (HAP 1) (FlgK) [Helicobacter
           pylori B38]
          Length = 606

 Score = 42.5 bits (98), Expect = 0.052,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 14/37 (37%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  +   EM  +I     + +   +I   ++ +   +
Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLL 602



 Score = 38.7 bits (88), Expect = 0.68,   Method: Composition-based stats.
 Identities = 6/29 (20%), Positives = 11/29 (37%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTD 30
           +S N       A +  +    +N+SN  
Sbjct: 5  LSSLNTSYTGLQAHQSMVDVTGNNISNAS 33


>gi|108563482|ref|YP_627798.1| flagellar hook-associated protein FlgK [Helicobacter pylori HPAG1]
 gi|107837255|gb|ABF85124.1| flagellar hook-associated protein 1 [Helicobacter pylori HPAG1]
          Length = 606

 Score = 42.5 bits (98), Expect = 0.052,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 14/37 (37%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  +   EM  +I     + +   +I   ++ +   +
Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLL 602



 Score = 38.7 bits (88), Expect = 0.68,   Method: Composition-based stats.
 Identities = 6/29 (20%), Positives = 11/29 (37%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTD 30
           +S N       A +  +    +N+SN  
Sbjct: 5  LSSLNTSYTGLQAHQSMVDVTGNNISNAS 33


>gi|94265700|ref|ZP_01289439.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|93453786|gb|EAT04158.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
          Length = 875

 Score = 42.5 bits (98), Expect = 0.052,   Method: Composition-based stats.
 Identities = 5/41 (12%), Positives = 17/41 (41%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  +   EM  +I     + +   +I  +++ ++  +  + 
Sbjct: 835 SGVSLDEEMANLIKFQHAYTAAARMISMSDEMLVTLLDTVR 875



 Score = 37.9 bits (86), Expect = 1.2,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 16/39 (41%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
           N+   A L  +  +     N++N DT G+   K+    
Sbjct: 8  LNLAKQALLTHQSSIQVAGHNVANVDTPGYTRQKINIEA 46


>gi|15639387|ref|NP_218836.1| flagellar basal-body rod protein (flgB) [Treponema pallidum
          subsp. pallidum str. Nichols]
 gi|189025629|ref|YP_001933401.1| flagellar basal-body rod protein [Treponema pallidum subsp.
          pallidum SS14]
 gi|3322679|gb|AAC65384.1| flagellar basal-body rod protein (flgB) [Treponema pallidum
          subsp. pallidum str. Nichols]
 gi|189018204|gb|ACD70822.1| flagellar basal-body rod protein [Treponema pallidum subsp.
          pallidum SS14]
 gi|291059786|gb|ADD72521.1| flagellar basal-body rod protein FlgB [Treponema pallidum subsp.
          pallidum str. Chicago]
          Length = 136

 Score = 42.5 bits (98), Expect = 0.052,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 20/62 (32%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A      R    A+N++N +  GF+   V F   +    +    + SF        +   
Sbjct: 14 ALDVNALRYEVTANNLANAEVPGFKRTDVNFEAELKRALDSQRNETSFFKQATAGTNMLS 73

Query: 71 GS 72
            
Sbjct: 74 SD 75


>gi|317178579|dbj|BAJ56367.1| flagellar hook-associated protein FlgK [Helicobacter pylori F30]
          Length = 606

 Score = 42.5 bits (98), Expect = 0.052,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 14/37 (37%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  +   EM  +I     + +   +I   ++ +   +
Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLL 602



 Score = 36.8 bits (83), Expect = 2.7,   Method: Composition-based stats.
 Identities = 6/29 (20%), Positives = 11/29 (37%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTD 30
           +S N       A +  +    +N+SN  
Sbjct: 5  LSSLNASYTGLQAHQSMVDVTGNNISNAS 33


>gi|89092142|ref|ZP_01165097.1| flagellar hook-associated protein [Oceanospirillum sp. MED92]
 gi|89083877|gb|EAR63094.1| flagellar hook-associated protein [Oceanospirillum sp. MED92]
          Length = 750

 Score = 42.5 bits (98), Expect = 0.052,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 18/42 (42%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
           +   +G  +  A +  L+    N+SN +T G+   +  F  
Sbjct: 1  MSLLLLGTQSLQANQSALAVTGQNISNVNTEGYSRQRPVFES 42


>gi|191168469|ref|ZP_03030257.1| flagellar hook-associated protein FlgK [Escherichia coli B7A]
 gi|190901488|gb|EDV61249.1| flagellar hook-associated protein FlgK [Escherichia coli B7A]
          Length = 547

 Score = 42.5 bits (98), Expect = 0.052,   Method: Composition-based stats.
 Identities = 13/119 (10%), Positives = 38/119 (31%), Gaps = 2/119 (1%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISF 58
           M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +         +  
Sbjct: 1   MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV 60

Query: 59  VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSA 117
               +EY +       +  T+    +      +         T     ++ D  + +  
Sbjct: 61  SGVQREYDAFITNQLRAAQTQSSGLIARYEQMSKIDNMLSTSTSSLATQMQDFFTSLQT 119


>gi|227876737|ref|ZP_03994846.1| flagellar basal body rod protein [Mobiluncus mulieris ATCC 35243]
 gi|269976264|ref|ZP_06183260.1| flagellar basal-body rod protein FlgC [Mobiluncus mulieris 28-1]
 gi|306817684|ref|ZP_07451426.1| flagellar basal-body rod protein FlgC [Mobiluncus mulieris ATCC
           35239]
 gi|307699910|ref|ZP_07636961.1| flagellar basal-body rod protein FlgC [Mobiluncus mulieris
           FB024-16]
 gi|227842634|gb|EEJ52834.1| flagellar basal body rod protein [Mobiluncus mulieris ATCC 35243]
 gi|269935593|gb|EEZ92131.1| flagellar basal-body rod protein FlgC [Mobiluncus mulieris 28-1]
 gi|304649498|gb|EFM46781.1| flagellar basal-body rod protein FlgC [Mobiluncus mulieris ATCC
           35239]
 gi|307614948|gb|EFN94166.1| flagellar basal-body rod protein FlgC [Mobiluncus mulieris
           FB024-16]
          Length = 132

 Score = 42.5 bits (98), Expect = 0.053,   Method: Composition-based stats.
 Identities = 12/111 (10%), Positives = 28/111 (25%), Gaps = 8/111 (7%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDI--DQK 55
           +  I         + L  ++DN++N +T        FR   V    V             
Sbjct: 6   AIGIAGTGMTVNRKWLDCISDNIANINTTKPMNEEAFRARYVVAQAVDYGRPAGTMVAGI 65

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106
                 G+     +  +  + G      ++  +  +           +   
Sbjct: 66  ALGGTDGRIVYDPKDPNANAEGYVRHPDIDLGSQMSQLIMAQRAYQANAAV 116



 Score = 40.6 bits (93), Expect = 0.21,   Method: Composition-based stats.
 Identities = 14/133 (10%), Positives = 32/133 (24%), Gaps = 6/133 (4%)

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
                G   +                           E              G  +  M 
Sbjct: 3   TFGAIGIAGTGMTVNRKWLDCISDNIANINTTKPMNEEAFRARYVVAQAVDYGRPAGTMV 62

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
            G       G     P  P  +        G++   + +   +M Q+I   + + +   +
Sbjct: 63  AGIALGGTDGRIVYDPKDPNANAE------GYVRHPDIDLGSQMSQLIMAQRAYQANAAV 116

Query: 227 IDENEKSMLEAIR 239
           +D  + +   A++
Sbjct: 117 VDRAKATYESALQ 129


>gi|94987302|ref|YP_595235.1| flagellar basal body rod protein FlgB [Lawsonia intracellularis
          PHE/MN1-00]
 gi|94731551|emb|CAJ54914.1| Flagellar basal body protein [Lawsonia intracellularis
          PHE/MN1-00]
          Length = 137

 Score = 42.5 bits (98), Expect = 0.053,   Method: Composition-based stats.
 Identities = 7/39 (17%), Positives = 17/39 (43%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50
               QR + +  N++N +T  +R   ++F + +     
Sbjct: 16 MDMQLQRQNVIMSNIANVNTPRYRPRTIEFEDQLQKALG 54


>gi|12620925|gb|AAG61142.1| flagellar hook-associated protein 1 [Helicobacter pylori]
          Length = 606

 Score = 42.5 bits (98), Expect = 0.053,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 14/37 (37%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  +   EM  +I     + +   +I   ++ +   +
Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLL 602



 Score = 36.8 bits (83), Expect = 2.7,   Method: Composition-based stats.
 Identities = 6/29 (20%), Positives = 11/29 (37%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTD 30
           +S N       A +  +    +N+SN  
Sbjct: 5  LSSLNASYTGLQAHQSMVDVTGNNISNAS 33


>gi|74317655|ref|YP_315395.1| flagellar basal-body rod protein FlgB [Thiobacillus denitrificans
          ATCC 25259]
 gi|74057150|gb|AAZ97590.1| flagellar basal-body rod protein FlgB [Thiobacillus denitrificans
          ATCC 25259]
          Length = 133

 Score = 42.5 bits (98), Expect = 0.054,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 22/67 (32%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A    +QR   +A N++N DT  ++   + F   +           + +A+         
Sbjct: 15 ALRVRDQRQQVLASNIANADTPHYKARDLDFKTALQGALQGTQTGGTALATTAPGHLAGK 74

Query: 71 GSFISTG 77
                G
Sbjct: 75 AGGSDAG 81


>gi|317011316|gb|ADU85063.1| flagellar hook-associated protein FlgK [Helicobacter pylori
           SouthAfrica7]
          Length = 606

 Score = 42.5 bits (98), Expect = 0.054,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 14/37 (37%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  +   EM  +I     + +   +I   ++ +   +
Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLL 602



 Score = 40.6 bits (93), Expect = 0.21,   Method: Composition-based stats.
 Identities = 6/29 (20%), Positives = 11/29 (37%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTD 30
           +S N       A +  +    +N+SN  
Sbjct: 5  LSSLNTSYTGLQAHQSMMDVTGNNISNAS 33


>gi|297538893|ref|YP_003674662.1| flagellar basal-body rod protein FlgB [Methylotenera sp. 301]
 gi|297258240|gb|ADI30085.1| flagellar basal-body rod protein FlgB [Methylotenera sp. 301]
          Length = 140

 Score = 42.5 bits (98), Expect = 0.054,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 27/80 (33%), Gaps = 4/80 (5%)

Query: 1  MQTSFNIGLA----AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56
          M    +  L+    A     QR   +A N++N DT  F+   + F   + +    I++  
Sbjct: 1  MLNRLDEALSFHQNALRVRGQRQELIAANIANADTPNFKARDIDFKAAMQSAVAGINKDA 60

Query: 57 SFVASGKEYLSKEVGSFIST 76
             A           +  S 
Sbjct: 61 FQTAKTSPLHLDGSRASNSN 80


>gi|188579864|ref|YP_001923309.1| flagellar basal body rod protein FlgB [Methylobacterium populi
          BJ001]
 gi|179343362|gb|ACB78774.1| flagellar basal body rod protein [Methylobacterium populi BJ001]
          Length = 129

 Score = 42.5 bits (98), Expect = 0.054,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 1/44 (2%)

Query: 15 LEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIKNDIDQKIS 57
          L  R +T+A N++N +T G++   V  F++V+     D+    +
Sbjct: 18 LATRQATIAGNVANANTPGYKARDVVPFAQVLARTGLDMSSTAN 61


>gi|42522141|ref|NP_967521.1| FlgK, flagellar hook-associated protein [Bdellovibrio bacteriovorus
           HD100]
 gi|39574672|emb|CAE78514.1| FlgK, flagellar hook-associated protein [Bdellovibrio bacteriovorus
           HD100]
          Length = 469

 Score = 42.5 bits (98), Expect = 0.054,   Method: Composition-based stats.
 Identities = 6/38 (15%), Positives = 15/38 (39%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           S  +   E  +MI   + +++   LI   ++     + 
Sbjct: 428 SGVSLDEETTKMIEFQKTYDASARLIKTADEMFDTVLN 465



 Score = 39.1 bits (89), Expect = 0.52,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 18/40 (45%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
            + G  + +  +  L TV  N++N  T GF   +V+   
Sbjct: 7  MMDTGKRSLMNSQTALQTVGHNIANKSTEGFSRQRVELQT 46


>gi|307131612|ref|YP_003883628.1| flagellar basal-body rod protein flgB [Dickeya dadantii 3937]
 gi|306529141|gb|ADM99071.1| Flagellar basal-body rod protein flgB [Dickeya dadantii 3937]
          Length = 139

 Score = 42.5 bits (98), Expect = 0.055,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 25/79 (31%), Gaps = 4/79 (5%)

Query: 1  MQTSFNIGL----AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56
          M    +  L     A     QR   +A N++N DT G++   + F+  +  +        
Sbjct: 1  MLDKLDTALRFQQEALNLRAQRQEILAANIANADTPGYQARDIDFASELNKVMEQGRASG 60

Query: 57 SFVASGKEYLSKEVGSFIS 75
            V+             + 
Sbjct: 61 QSVSLSLTSARHIPAQTVQ 79


>gi|315587007|gb|ADU41388.1| flagellar hook-associated protein FlgK [Helicobacter pylori 35A]
          Length = 606

 Score = 42.5 bits (98), Expect = 0.055,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 14/37 (37%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  +   EM  +I     + +   +I   ++ +   +
Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLL 602



 Score = 36.8 bits (83), Expect = 2.8,   Method: Composition-based stats.
 Identities = 6/29 (20%), Positives = 11/29 (37%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTD 30
           +S N       A +  +    +N+SN  
Sbjct: 5  LSSLNASYTGLQAHQSMVDVTGNNISNAS 33


>gi|261838448|gb|ACX98214.1| flagellar hook-associated protein 1 [Helicobacter pylori 51]
          Length = 606

 Score = 42.5 bits (98), Expect = 0.055,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 14/37 (37%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  +   EM  +I     + +   +I   ++ +   +
Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLL 602



 Score = 36.8 bits (83), Expect = 2.8,   Method: Composition-based stats.
 Identities = 6/29 (20%), Positives = 11/29 (37%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTD 30
           +S N       A +  +    +N+SN  
Sbjct: 5  LSSLNASYTGLQAHQSMVDVTGNNISNAS 33


>gi|188534173|ref|YP_001907970.1| flagellar basal body rod protein FlgB [Erwinia tasmaniensis
          Et1/99]
 gi|188029215|emb|CAO97087.1| Flagellar basal-body rod protein [Erwinia tasmaniensis Et1/99]
          Length = 137

 Score = 42.5 bits (98), Expect = 0.055,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 25/66 (37%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   +A N++N DT G++   + F+  +     +   + + ++          
Sbjct: 15 ALNLRAQRQEILASNIANADTPGYQARDIDFASQLSKAVENGRAQGTGLSLAVTSARHIP 74

Query: 71 GSFIST 76
             + +
Sbjct: 75 AETLQS 80


>gi|187778745|ref|ZP_02995218.1| hypothetical protein CLOSPO_02340 [Clostridium sporogenes ATCC
          15579]
 gi|187772370|gb|EDU36172.1| hypothetical protein CLOSPO_02340 [Clostridium sporogenes ATCC
          15579]
          Length = 133

 Score = 42.5 bits (98), Expect = 0.055,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 26/58 (44%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSK 68
          +  A   R   +++N++N +T G++   V F E +    N+I+ K++           
Sbjct: 19 SMDASSYRGRAISNNIANYNTPGYKRHYVTFEETLKDNLNNINMKVTTEKHMNNGAEF 76


>gi|332673917|gb|AEE70734.1| flagellar hook-associated protein FlgK [Helicobacter pylori 83]
          Length = 606

 Score = 42.5 bits (98), Expect = 0.055,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 14/37 (37%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  +   EM  +I     + +   +I   ++ +   +
Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLL 602



 Score = 38.7 bits (88), Expect = 0.74,   Method: Composition-based stats.
 Identities = 6/29 (20%), Positives = 11/29 (37%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTD 30
           +S N       A +  +    +N+SN  
Sbjct: 5  LSSLNTSYTGLQAHQSMVDVTGNNISNAS 33


>gi|294013092|ref|YP_003546552.1| flagellar hook-associated protein 1 FlgK [Sphingobium japonicum
           UT26S]
 gi|292676422|dbj|BAI97940.1| flagellar hook-associated protein 1 FlgK [Sphingobium japonicum
           UT26S]
          Length = 446

 Score = 42.5 bits (98), Expect = 0.055,   Method: Composition-based stats.
 Identities = 26/245 (10%), Positives = 64/245 (26%), Gaps = 33/245 (13%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M   F IG +   A    ++ V++N++N  T G+    V           +     + +A
Sbjct: 1   MSDLFIIGASGTKAYRTAMAAVSENIANASTEGYSRRSV--------TTVESGSSTATMA 52

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
                 +       S     D  L             +  T             ++ S  
Sbjct: 53  VYISRANFGGTDVKSVNRATDPYL----------DATVRYTNTQLGSAVARMRWLTDSET 102

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
                   +   +    +  +        +  +V     +  V   Q F +        +
Sbjct: 103 ALNDTETGIGQLMTGMFQNMDKLAASPNDKSLRVTTLDSIGRVA--QAFNQTAADLAQVS 160

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQ----MIHLTQKFNSITTLIDENEKSMLE 236
                    S  T+ +         ++  +      ++      ++   L+D  + ++  
Sbjct: 161 SGIATEAQASVTTINQ---------ALSALADINNSLLRAQPGTSAYAQLLDSRDAALGT 211

Query: 237 AIRNI 241
              N+
Sbjct: 212 LSSNL 216


>gi|251780661|ref|ZP_04823581.1| flagellar basal-body rod protein FlgB [Clostridium botulinum E1
          str. 'BoNT E Beluga']
 gi|243084976|gb|EES50866.1| flagellar basal-body rod protein FlgB [Clostridium botulinum E1
          str. 'BoNT E Beluga']
          Length = 133

 Score = 42.5 bits (98), Expect = 0.055,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 19/40 (47%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50
             A   R   +A+NM+N +T G++   V F E +    +
Sbjct: 18 GLKASNARSKAIANNMANINTKGYKKFNVIFEENLKNNSD 57


>gi|222095367|ref|YP_002529427.1| flagellar basal body rod protein flgb [Bacillus cereus Q1]
 gi|221239425|gb|ACM12135.1| flagellar basal-body rod protein FlgB [Bacillus cereus Q1]
          Length = 172

 Score = 42.5 bits (98), Expect = 0.055,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 28/72 (38%)

Query: 12  QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
              L  + +TV+ N++N +T G++   V F+E +           + + +  +       
Sbjct: 49  MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKSNTADLKTNADLYQTNEM 108

Query: 72  SFISTGTELDFA 83
              +   +  +A
Sbjct: 109 HLPTVNAKNTYA 120


>gi|293605009|ref|ZP_06687405.1| flagellar hook-associated protein 1 [Achromobacter piechaudii
          ATCC 43553]
 gi|292816614|gb|EFF75699.1| flagellar hook-associated protein 1 [Achromobacter piechaudii
          ATCC 43553]
          Length = 557

 Score = 42.5 bits (98), Expect = 0.055,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 18/38 (47%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39
             +   L    A +  L+T + N++N  TVG+   +V
Sbjct: 1  MNLYKTALGGLNAAQAGLATTSHNINNATTVGYNRQRV 38


>gi|238919256|ref|YP_002932771.1| flagellar basal body rod protein FlgB [Edwardsiella ictaluri
          93-146]
 gi|238868825|gb|ACR68536.1| flagellar basal-body rod protein FlgB, putative [Edwardsiella
          ictaluri 93-146]
          Length = 137

 Score = 42.5 bits (98), Expect = 0.055,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 24/65 (36%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   +A N++N DT G++   + F+  +  +  +     S +A          
Sbjct: 15 ALNLRAQRQEILAANIANADTPGYQARDIDFASQLSRVLENGRPDGSGIALTLTSARHIP 74

Query: 71 GSFIS 75
             + 
Sbjct: 75 AQNVQ 79


>gi|94263281|ref|ZP_01287097.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|93456364|gb|EAT06488.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
          Length = 879

 Score = 42.5 bits (98), Expect = 0.055,   Method: Composition-based stats.
 Identities = 5/41 (12%), Positives = 17/41 (41%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  +   EM  +I     + +   +I  +++ ++  +  + 
Sbjct: 839 SGVSLDEEMANLIKFQHAYTAAARMISMSDEMLVTLLDTVR 879



 Score = 37.9 bits (86), Expect = 1.2,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 16/39 (41%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
           N+   A L  +  +     N++N DT G+   K+    
Sbjct: 8  LNLAKQALLTHQSSIQVAGHNVANVDTPGYTRQKINIEA 46


>gi|207092063|ref|ZP_03239850.1| flagellar hook-associated protein FlgK [Helicobacter pylori
           HPKX_438_AG0C1]
          Length = 606

 Score = 42.5 bits (98), Expect = 0.056,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 14/37 (37%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  +   EM  +I     + +   +I   ++ +   +
Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLL 602



 Score = 38.7 bits (88), Expect = 0.74,   Method: Composition-based stats.
 Identities = 6/29 (20%), Positives = 11/29 (37%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTD 30
           +S N       A +  +    +N+SN  
Sbjct: 5  LSSLNTSYTGLQAHQSMVDVTGNNISNAS 33


>gi|167567748|ref|ZP_02360664.1| flagellar basal-body rod protein FlgC [Burkholderia oklahomensis
           EO147]
 gi|167574699|ref|ZP_02367573.1| flagellar basal-body rod protein FlgC [Burkholderia oklahomensis
           C6786]
          Length = 138

 Score = 42.5 bits (98), Expect = 0.056,   Method: Composition-based stats.
 Identities = 7/42 (16%), Positives = 19/42 (45%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G +   N + + EM  M+  T+ +++   ++       +E +
Sbjct: 93  GNVLYPNVDPVEEMTDMLSSTRAYSTNVEVLGRVNGMQMELL 134



 Score = 37.2 bits (84), Expect = 2.0,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 35/99 (35%), Gaps = 7/99 (7%)

Query: 7   IGLAAQLALEQRLSTVADNMSNT----DTVG--FRTIKVKFSEVVGAIKNDIDQKISFVA 60
           I  +A  A   RL+T+A N++N      T    +R  K  F+ +     +      +   
Sbjct: 9   IAGSAMAAQTVRLNTIASNLANADAASSTEASTYRARKPVFASIFKVGADGEVNGAAVQV 68

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
                 ++ +      G  L  A +G+  +    P   +
Sbjct: 69  LDVVQSTEPLRKVHQPGNPLADA-DGNVLYPNVDPVEEM 106


>gi|261341496|ref|ZP_05969354.1| flagellar basal-body rod protein FlgC [Enterobacter cancerogenus
          ATCC 35316]
 gi|288316292|gb|EFC55230.1| flagellar basal-body rod protein FlgC [Enterobacter cancerogenus
          ATCC 35316]
          Length = 141

 Score = 42.5 bits (98), Expect = 0.056,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 22/47 (46%), Gaps = 6/47 (12%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGA 47
          +  +A  A   RL+T+A N++N +T        ++  +  F+ V   
Sbjct: 9  VSGSAMTAQTVRLNTIASNLANAETPAVDEGNVYKARRPVFAAVYQN 55



 Score = 40.6 bits (93), Expect = 0.20,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 20/43 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   + N + EM  M+  ++ F +   +++  +      +R
Sbjct: 95  GYVWYPDINVVEEMADMMSASRNFETNVDVLNNVKSMQQSLLR 137


>gi|149182500|ref|ZP_01860973.1| flagellar basal-body rod protein B [Bacillus sp. SG-1]
 gi|148849760|gb|EDL63937.1| flagellar basal-body rod protein B [Bacillus sp. SG-1]
          Length = 129

 Score = 42.5 bits (98), Expect = 0.056,   Method: Composition-based stats.
 Identities = 5/41 (12%), Positives = 16/41 (39%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50
                  +   ++ N++N DT  ++   + F + +    +
Sbjct: 13 NGLNYSSAKQKVISQNIANVDTPNYKAKSISFKDQLNESIS 53


>gi|218549199|ref|YP_002382990.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia fergusonii ATCC 35469]
 gi|218356740|emb|CAQ89368.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia fergusonii ATCC 35469]
 gi|324113868|gb|EGC07842.1| flagellar basal-body rod protein FlgB [Escherichia fergusonii B253]
 gi|325497619|gb|EGC95478.1| flagellar component of cell-proximal portion of basal-body rod
           [Escherichia fergusonii ECD227]
          Length = 163

 Score = 42.2 bits (97), Expect = 0.057,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 22/62 (35%)

Query: 11  AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
           A     QR   +A N++N DT G++   + F+  +  I      +   V+          
Sbjct: 40  ALNLRAQRQEVLAANIANADTPGYQARDLDFASELKKIMVRGRNEAQGVSLTLTSTQHIP 99

Query: 71  GS 72
             
Sbjct: 100 AQ 101


>gi|317177869|dbj|BAJ55658.1| flagellar hook-associated protein FlgK [Helicobacter pylori F16]
          Length = 606

 Score = 42.2 bits (97), Expect = 0.057,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 14/37 (37%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  +   EM  +I     + +   +I   ++ +   +
Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLL 602



 Score = 36.8 bits (83), Expect = 2.9,   Method: Composition-based stats.
 Identities = 6/29 (20%), Positives = 11/29 (37%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTD 30
           +S N       A +  +    +N+SN  
Sbjct: 5  LSSLNASYTGLQAHQSMVDVTGNNISNAS 33


>gi|220922288|ref|YP_002497590.1| flagellar hook-associated protein FlgK [Methylobacterium nodulans
           ORS 2060]
 gi|219946895|gb|ACL57287.1| flagellar hook-associated protein FlgK [Methylobacterium nodulans
           ORS 2060]
          Length = 623

 Score = 42.2 bits (97), Expect = 0.057,   Method: Composition-based stats.
 Identities = 6/39 (15%), Positives = 16/39 (41%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            S  N   E+ ++I L   + +   ++   +  +   +R
Sbjct: 584 QSGVNIDEELSRLIQLQSAYAANARVLTAAKDMIDTLMR 622



 Score = 41.4 bits (95), Expect = 0.12,   Method: Composition-based stats.
 Identities = 7/33 (21%), Positives = 14/33 (42%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGF 34
            + N   A     +  +  V+ N++N  T G+
Sbjct: 3  LNALNTATAGLQVTQAAIGIVSQNVANQSTPGY 35


>gi|73539456|ref|YP_299823.1| flagellar hook-associated protein FlgK [Ralstonia eutropha
          JMP134]
 gi|72122793|gb|AAZ64979.1| Protein of unknown function DUF1078 [Ralstonia eutropha JMP134]
          Length = 631

 Score = 42.2 bits (97), Expect = 0.058,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 21/51 (41%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
           + F+IGL+     +  L+T + N +N  T G+       +   G   +  
Sbjct: 1  MSLFSIGLSGLNTAQNALTTTSHNFANAATEGYSRQNTIVASAGGQYTSQG 51



 Score = 37.9 bits (86), Expect = 1.3,   Method: Composition-based stats.
 Identities = 7/37 (18%), Positives = 11/37 (29%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N   E   M+   Q + +   +I          I
Sbjct: 591 SGVNMDEETVSMLRFQQMYQANARVIQAASTLFDTII 627


>gi|126443247|ref|YP_001061243.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
           668]
 gi|167725927|ref|ZP_02409163.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
           DM98]
 gi|126222738|gb|ABN86243.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
           668]
          Length = 124

 Score = 42.2 bits (97), Expect = 0.058,   Method: Composition-based stats.
 Identities = 15/100 (15%), Positives = 30/100 (30%), Gaps = 4/100 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
             +       A   +   +A N++N DT G++   + F   +     D        A   
Sbjct: 10  GLHPAALKLRAERTK--VIASNLANLDTPGYQARDLDFKRSLAEAGGDGAHARPGDALTG 67

Query: 64  EYLSKEVGSFI--STGTELDFALEGDAWFALESPRGIILT 101
                    +     G  ++  +E  A+        + LT
Sbjct: 68  GVTLGYRVPYQAAQDGNTVELGIEQAAFAQNAVDFQMSLT 107


>gi|118474675|ref|YP_891310.1| flagellar hook-associated protein FlgK [Campylobacter fetus
          subsp. fetus 82-40]
 gi|118413901|gb|ABK82321.1| flagellar hook-associated protein FlgK [Campylobacter fetus
          subsp. fetus 82-40]
          Length = 617

 Score = 42.2 bits (97), Expect = 0.059,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 17/40 (42%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
          S   G +   A + ++     N++N ++  +   +V  S 
Sbjct: 6  SLYTGASGLNAAQLQIQVTGQNITNINSDYYTRQRVVQSA 45


>gi|50954402|ref|YP_061690.1| flagellar basal-body rod protein [Leifsonia xyli subsp. xyli str.
           CTCB07]
 gi|50950884|gb|AAT88585.1| flagellar basal-body rod protein [Leifsonia xyli subsp. xyli str.
           CTCB07]
          Length = 132

 Score = 42.2 bits (97), Expect = 0.059,   Method: Composition-based stats.
 Identities = 4/45 (8%), Positives = 17/45 (37%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +G++  +  +   +M  +I   + + +    +         A++
Sbjct: 84  AQGYVRGTGIDLSVQMTNLIMAQRAYQANANTVSSARYMYQSALQ 128


>gi|307293781|ref|ZP_07573625.1| flagellar hook-associated protein FlgK [Sphingobium
           chlorophenolicum L-1]
 gi|306879932|gb|EFN11149.1| flagellar hook-associated protein FlgK [Sphingobium
           chlorophenolicum L-1]
          Length = 446

 Score = 42.2 bits (97), Expect = 0.060,   Method: Composition-based stats.
 Identities = 27/245 (11%), Positives = 64/245 (26%), Gaps = 33/245 (13%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M   F IG +   A    ++ V++N++N  T G+    V           +     + +A
Sbjct: 1   MSDLFIIGASGTKAYRTAMAAVSENIANASTEGYSRRSV--------TTVESGSSTATMA 52

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
                 +       S     D  L             +  T             ++ S  
Sbjct: 53  VYISRANFGGTDVKSVNRSTDPYL----------DATVRYTNTQLGSAVARMRWLTDSET 102

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
                   V   +    +  +        +  +V     +  V   Q F +        +
Sbjct: 103 ALNDTETGVGQLMTGMFQNMDKLAASPNDKSLRVTTLDSISRVA--QAFKQTAADLTQVS 160

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQ----MIHLTQKFNSITTLIDENEKSMLE 236
                    S  T+ +         ++  +      ++      ++   L+D  + ++  
Sbjct: 161 SGIATEAQASVTTINQ---------ALSALADINNSLLRAQPGTSAYAQLLDSRDAALGT 211

Query: 237 AIRNI 241
              N+
Sbjct: 212 LSSNL 216


>gi|220904841|ref|YP_002480153.1| flagellar basal-body rod protein FlgC [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
 gi|219869140|gb|ACL49475.1| flagellar basal-body rod protein FlgC [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
          Length = 145

 Score = 42.2 bits (97), Expect = 0.060,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 21/42 (50%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   + N + EM  ++   + F +  T +D  +   ++A+
Sbjct: 100 GYVMYPDINVVEEMANLMTAQRNFEANVTTVDAIKGMYVKAL 141



 Score = 37.9 bits (86), Expect = 1.3,   Method: Composition-based stats.
 Identities = 9/31 (29%), Positives = 18/31 (58%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32
           T+F+I  +   A   R++T++ N++N  T 
Sbjct: 4  MTAFDISASGLAADRTRINTISMNLANAKTT 34


>gi|163803167|ref|ZP_02197050.1| flagellar basal-body rod protein C [Vibrio sp. AND4]
 gi|159173067|gb|EDP57900.1| flagellar basal-body rod protein C [Vibrio sp. AND4]
          Length = 144

 Score = 42.2 bits (97), Expect = 0.060,   Method: Composition-based stats.
 Identities = 7/44 (15%), Positives = 20/44 (45%)

Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +G++   + + + EM  M+  T+ F +   ++   +      +R
Sbjct: 96  QGYVYYPDIDVVSEMADMMSATRSFETNVEVLTNVKSMQQGLLR 139



 Score = 36.0 bits (81), Expect = 5.2,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 35/96 (36%), Gaps = 6/96 (6%)

Query: 10  AAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +A  A   RL+TVA N++N D V       ++ +K  F+ V    +   D  +   A  +
Sbjct: 12  SAMTAQTVRLNTVASNLANADAVSANPDDAYKALKPVFATVYQKTQMTTDNGVYPNAEVR 71

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
                +         E +  L  +  +       ++
Sbjct: 72  IVDVVQSAGQAEQRFEPNNPLANNQGYVYYPDIDVV 107


>gi|254299689|ref|ZP_04967138.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
           406e]
 gi|157809389|gb|EDO86559.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
           406e]
          Length = 131

 Score = 42.2 bits (97), Expect = 0.060,   Method: Composition-based stats.
 Identities = 15/100 (15%), Positives = 30/100 (30%), Gaps = 4/100 (4%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
             +       A   +   +A N++N DT G++   + F   +     D        A   
Sbjct: 17  GLHPAALKLRAERTK--VIASNLANLDTPGYQARDLDFKRSLAEAGGDGAHARPGDALTG 74

Query: 64  EYLSKEVGSFI--STGTELDFALEGDAWFALESPRGIILT 101
                    +     G  ++  +E  A+        + LT
Sbjct: 75  GVTLGYRVPYQAAQDGNTVELGIEQAAFAQNAVDFQMSLT 114


>gi|149189834|ref|ZP_01868114.1| flagellar basal body rod protein [Vibrio shilonii AK1]
 gi|148836320|gb|EDL53277.1| flagellar basal body rod protein [Vibrio shilonii AK1]
          Length = 144

 Score = 42.2 bits (97), Expect = 0.060,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 18/43 (41%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++     + + EM  M+  T+ F +   ++   +      +R
Sbjct: 97  GYVYYPGVDVVAEMADMMSATRSFETNVEVLANVKSMQQGLLR 139



 Score = 40.6 bits (93), Expect = 0.17,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 37/99 (37%), Gaps = 6/99 (6%)

Query: 7   IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           I  +A  A   RL+TVA N++N D V       ++ +K  F+ V    +    Q +   A
Sbjct: 9   IAGSAMTAQTVRLNTVASNLANADAVSANPDDAYKALKPVFATVYSQTQLAAGQNVYPNA 68

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
             +     +  +      E +  L  +  +       ++
Sbjct: 69  EVRIVDVVQSDAKADQRFEPNNPLANEEGYVYYPGVDVV 107


>gi|307293789|ref|ZP_07573633.1| flagellar basal-body rod protein FlgC [Sphingobium chlorophenolicum
           L-1]
 gi|306879940|gb|EFN11157.1| flagellar basal-body rod protein FlgC [Sphingobium chlorophenolicum
           L-1]
          Length = 136

 Score = 42.2 bits (97), Expect = 0.061,   Method: Composition-based stats.
 Identities = 8/36 (22%), Positives = 18/36 (50%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +S  E+  MI   + + +   +++  +  M+E IR
Sbjct: 98  VDSSAELVDMIETARMYQNNVQVLNTAKSLMMETIR 133



 Score = 35.6 bits (80), Expect = 5.8,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 30/87 (34%), Gaps = 6/87 (6%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSEVVGAIKNDIDQK 55
             F+I   A  A   RL+  A NM+N  +  G     +R IK  F  V  +      + 
Sbjct: 7  MNVFDIAGRAMSAQLVRLNATASNMANAGNVTGSAAEAYRAIKPVFQSVTDSPGVSTVKV 66

Query: 56 ISFVASGKEYLSKEVGSFISTGTELDF 82
           + V +  +   +   +        D 
Sbjct: 67 QNVVTTNAQPTKRHDPNHPLADKNGDV 93


>gi|68164548|gb|AAY87277.1| predicted flagellar proximal rod protein [uncultured bacterium
           BAC17H8]
          Length = 138

 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 7/45 (15%), Positives = 19/45 (42%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           + GF+  +  N   E  +M+   +++ +   ++      M+  I 
Sbjct: 91  QDGFVYAAAVNVEEEFVEMLEAKRQYQNNVEVVTTLRALMMRTIN 135



 Score = 37.5 bits (85), Expect = 1.7,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 30/86 (34%), Gaps = 6/86 (6%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQK 55
             F++   +  A   RL+T+A N++N   +       +R +K  F     A   D    
Sbjct: 5  DNIFDVASRSMSAQLVRLNTIASNLANAGNISGSEDQAYRAMKPIFKTTYAANVKDSGIS 64

Query: 56 ISFVASGKEYLSKEVGSFISTGTELD 81
           + VA       +    ++      D
Sbjct: 65 TTEVAGITTSERRPERIYMPNHPLSD 90


>gi|307721502|ref|YP_003892642.1| flagellar hook-associated protein FlgK [Sulfurimonas autotrophica
           DSM 16294]
 gi|306979595|gb|ADN09630.1| flagellar hook-associated protein FlgK [Sulfurimonas autotrophica
           DSM 16294]
          Length = 626

 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 5/35 (14%), Positives = 13/35 (37%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            +   EM  +I     + +   +I   ++ M   +
Sbjct: 588 VSIDEEMTNLIKYQTSYGAAAKVITTVDQMMQTLL 622



 Score = 37.9 bits (86), Expect = 1.3,   Method: Composition-based stats.
 Identities = 10/82 (12%), Positives = 32/82 (39%), Gaps = 2/82 (2%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV--VGAIKNDIDQKISFVA 60
           + +IG +     +  ++T   N++N +  G+   +V  S    +     D+   +    
Sbjct: 6  NTLSIGYSGLSTAQVGINTTGHNIANAENEGYTRQRVVTSAANPLITSAGDVGNGVEVQD 65

Query: 61 SGKEYLSKEVGSFISTGTELDF 82
            + + +     + S  ++ ++
Sbjct: 66 IKRVFDNFVFDRYNSISSDKEY 87


>gi|237810458|ref|YP_002894909.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
           MSHR346]
 gi|237506387|gb|ACQ98705.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
           MSHR346]
          Length = 163

 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 27/93 (29%), Gaps = 1/93 (1%)

Query: 11  AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
           A      R   ++ N++N DT G+R   V FS  +           +  A+         
Sbjct: 15  ALDVRAYRQELLSSNIANADTPGYRARDVDFSSTLARALKQDGATSAGNAAQLPLAQPAG 74

Query: 71  GSFISTGTELDFA-LEGDAWFALESPRGIILTR 102
            +   +      A L G+              R
Sbjct: 75  VASGMSMATTSGAHLAGNVKLIPTGGPSDDYGR 107


>gi|171059406|ref|YP_001791755.1| flagellar hook-associated protein FlgK [Leptothrix cholodnii
          SP-6]
 gi|170776851|gb|ACB34990.1| flagellar hook-associated protein FlgK [Leptothrix cholodnii
          SP-6]
          Length = 640

 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 22/79 (27%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
           N+G  A  A + +L T   N++N +  G+       + V G                  
Sbjct: 7  LNLGTRAMFASQAQLQTTGHNIANANVAGYSRQDTVLTTVGGQYSGAGYYGRGVAVQTVT 66

Query: 65 YLSKEVGSFISTGTELDFA 83
                 +     T    A
Sbjct: 67 RAVSAFQTDQVAQTRAQAA 85


>gi|54308094|ref|YP_129114.1| flagellar basal body rod protein FlgB [Photobacterium profundum
          SS9]
 gi|46912520|emb|CAG19312.1| putative polar flagellar FlgB [Photobacterium profundum SS9]
          Length = 131

 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 19/37 (51%)

Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
          +R   +A N++N +T G++   + F   + A  +  +
Sbjct: 21 KRAEILASNIANANTPGYKAKDMDFGRALKAATSGAN 57


>gi|160939640|ref|ZP_02086988.1| hypothetical protein CLOBOL_04532 [Clostridium bolteae ATCC
           BAA-613]
 gi|158437431|gb|EDP15195.1| hypothetical protein CLOBOL_04532 [Clostridium bolteae ATCC
           BAA-613]
          Length = 484

 Score = 42.2 bits (97), Expect = 0.063,   Method: Composition-based stats.
 Identities = 23/202 (11%), Positives = 48/202 (23%), Gaps = 8/202 (3%)

Query: 41  FSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL 100
           F++++            +      +       F +     D        F L+      +
Sbjct: 287 FTDMLTGADPINAGIPYYQNKMDNFAQTLADVFNNKIHADDPDFPDKYKFLLQGGVDGKV 346

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           T             VS   +    D       I      F           G    +  +
Sbjct: 347 TAGNISISDQWADDVSYIIRKQNPDGELDNQDILDMKAAFEQDFNFGGEYTGTF--SEFI 404

Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220
            SV  + G   + NS              S      G       +   E   M+   + +
Sbjct: 405 TSVTNTLGSGIKTNSARMSASLAIAESADSERMGVSG------VSLNEEGISMMTYNKAY 458

Query: 221 NSITTLIDENEKSMLEAIRNIA 242
            ++  L+   ++ +   I  + 
Sbjct: 459 QALGRLMTTMDEQLDMIINKMG 480



 Score = 36.4 bits (82), Expect = 3.9,   Method: Composition-based stats.
 Identities = 6/37 (16%), Positives = 15/37 (40%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
                      ++ +  V +N+SN+ T G+   ++ 
Sbjct: 2  GLETAKRGIQVNQKAIDIVGNNISNSKTKGYTRQRLD 38


>gi|126734126|ref|ZP_01749873.1| flagellar hook-associated protein FlgK [Roseobacter sp. CCS2]
 gi|126716992|gb|EBA13856.1| flagellar hook-associated protein FlgK [Roseobacter sp. CCS2]
          Length = 480

 Score = 42.2 bits (97), Expect = 0.063,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 20/44 (45%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44
          M ++ N  +    A  +    V+ N+SN  T G+    V+ S V
Sbjct: 1  MSSALNNAVTGLTATSRMAEVVSSNLSNALTEGYGRRGVELSSV 44


>gi|300114802|ref|YP_003761377.1| flagellar basal-body rod protein FlgB [Nitrosococcus watsonii
          C-113]
 gi|299540739|gb|ADJ29056.1| flagellar basal-body rod protein FlgB [Nitrosococcus watsonii
          C-113]
          Length = 131

 Score = 42.2 bits (97), Expect = 0.064,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 17/37 (45%)

Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
           +R   +A N++N DT G++   + F   +   +   
Sbjct: 20 SRRAEILAANLANGDTPGYKARDIDFKAALQQAQGQG 56


>gi|297380296|gb|ADI35183.1| flagellar hook-associated protein FlgK [Helicobacter pylori v225d]
          Length = 606

 Score = 42.2 bits (97), Expect = 0.064,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 14/37 (37%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  +   EM  +I     + +   +I   ++ +   +
Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVISAIDRMIDTLL 602



 Score = 36.8 bits (83), Expect = 2.6,   Method: Composition-based stats.
 Identities = 6/29 (20%), Positives = 11/29 (37%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTD 30
           +S N       A +  +    +N+SN  
Sbjct: 5  LSSLNASYTGLQAHQSMVDVTGNNISNAS 33


>gi|229029418|ref|ZP_04185501.1| Flagellar hook-associated protein FlgK [Bacillus cereus AH1271]
 gi|228731877|gb|EEL82776.1| Flagellar hook-associated protein FlgK [Bacillus cereus AH1271]
          Length = 432

 Score = 42.2 bits (97), Expect = 0.064,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 25/53 (47%)

Query: 6  NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
          N  L+  LA +  L T   N+SN  T G+    V F  V  +  +  +Q+I +
Sbjct: 7  NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQAVNFGSVGASNGHTPEQRIGY 59



 Score = 37.9 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 5/34 (14%), Positives = 11/34 (32%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
            N   EM  ++   + F + +  I    +     
Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAISTMNEVFDSL 427


>gi|167835108|ref|ZP_02461991.1| flagellar basal body rod protein FlgB [Burkholderia thailandensis
           MSMB43]
          Length = 163

 Score = 42.2 bits (97), Expect = 0.064,   Method: Composition-based stats.
 Identities = 15/93 (16%), Positives = 26/93 (27%), Gaps = 1/93 (1%)

Query: 11  AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
           A      R   ++ N++N DT G+R   V FS  +           +   +         
Sbjct: 15  ALDVRAYRQELLSSNIANADTPGYRARDVDFSSTLARALKQDGAASAGNGATLPLAQPAG 74

Query: 71  GSFISTGTELDFA-LEGDAWFALESPRGIILTR 102
            +   +      A L G+              R
Sbjct: 75  VTSGMSMAATSGAHLAGNVKLIPTGGPSDDYGR 107


>gi|86356310|ref|YP_468202.1| flagellar basal body rod protein FlgC [Rhizobium etli CFN 42]
 gi|86280412|gb|ABC89475.1| flagellar basal-body rod protein [Rhizobium etli CFN 42]
          Length = 138

 Score = 42.2 bits (97), Expect = 0.064,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 27/80 (33%), Gaps = 7/80 (8%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNT----DTVG---FRTIKVKFSEVVGAIKNDIDQKI 56
          +  I  +   A   RL  V++N++N     DT G   +R   + F + +          +
Sbjct: 7  AMKIAGSGLEAQSTRLRIVSENIANARSTGDTPGADPYRRKTITFGQQMDRTSGVETVNV 66

Query: 57 SFVASGKEYLSKEVGSFIST 76
            V   +   S E       
Sbjct: 67 KKVGVDEGDFSTEFDPSNPA 86



 Score = 41.8 bits (96), Expect = 0.077,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 19/47 (40%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           G ++  N N + EM  M    + +++    I +    +   I  + S
Sbjct: 91  GVVKLPNVNILVEMADMREANRSYDANLQTIRQTRDLISSTIDLLKS 137


>gi|85058008|ref|YP_453710.1| flagellar basal-body rod protein FlgB [Sodalis glossinidius str.
          'morsitans']
 gi|84778528|dbj|BAE73305.1| flagellar basal-body rod protein FlgB [Sodalis glossinidius str.
          'morsitans']
          Length = 137

 Score = 42.2 bits (97), Expect = 0.064,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 27/67 (40%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69
          AA   L +R   +A N++N DT G++   + F+  +        Q+ + ++         
Sbjct: 14 AALNILNRRQDVLAANIANADTPGYQARDIPFTRELRRAIEQGQQRSNNLSLSLTSRQHI 73

Query: 70 VGSFIST 76
              ++ 
Sbjct: 74 PAEGVAH 80


>gi|313610113|gb|EFR85437.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
          FSL F2-208]
          Length = 389

 Score = 42.2 bits (97), Expect = 0.064,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 18/42 (42%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46
          FN  L+   A +        N+SN +T G+    V  + V G
Sbjct: 6  FNTSLSGMSAAQIANMVAQQNISNMNTPGYIRQAVDQTAVYG 47


>gi|296102902|ref|YP_003613048.1| flagellar hook-associated protein FlgK [Enterobacter cloacae
          subsp. cloacae ATCC 13047]
 gi|295057361|gb|ADF62099.1| flagellar hook-associated protein FlgK [Enterobacter cloacae
          subsp. cloacae ATCC 13047]
          Length = 545

 Score = 42.2 bits (97), Expect = 0.064,   Method: Composition-based stats.
 Identities = 9/52 (17%), Positives = 21/52 (40%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+TV++N+S+ +  G+             +    
Sbjct: 1  MSSLINSAMSGLSAAQAALNTVSNNISSYNVAGYTRQTTVLGASNSTLTGGG 52


>gi|217032694|ref|ZP_03438180.1| hypothetical protein HPB128_202g28 [Helicobacter pylori B128]
 gi|298735878|ref|YP_003728403.1| flagellar hook-associated protein 1 FlgK [Helicobacter pylori B8]
 gi|216945624|gb|EEC24275.1| hypothetical protein HPB128_202g28 [Helicobacter pylori B128]
 gi|298355067|emb|CBI65939.1| flagellar hook-associated protein 1 FlgK [Helicobacter pylori B8]
          Length = 606

 Score = 42.2 bits (97), Expect = 0.064,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 14/37 (37%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  +   EM  +I     + +   +I   ++ +   +
Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVISAIDRMIDTLL 602



 Score = 38.7 bits (88), Expect = 0.67,   Method: Composition-based stats.
 Identities = 6/29 (20%), Positives = 11/29 (37%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTD 30
           +S N       A +  +    +N+SN  
Sbjct: 5  LSSLNTSYTGLQAHQSMVDVTGNNISNAS 33


>gi|207110317|ref|ZP_03244479.1| flagellar basal body rod protein FlgC [Helicobacter pylori
          HPKX_438_CA4C1]
          Length = 113

 Score = 42.2 bits (97), Expect = 0.064,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 6/49 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44
           +SF+I      A   R + ++ N++N +T     G  +R  +  F   
Sbjct: 3  LSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFKAF 51


>gi|17548572|ref|NP_521912.1| flagellar hook-associated protein FlgK [Ralstonia solanacearum
          GMI1000]
 gi|17430820|emb|CAD17502.1| probable flagellar hook-associated protein 1 [Ralstonia
          solanacearum GMI1000]
          Length = 642

 Score = 42.2 bits (97), Expect = 0.064,   Method: Composition-based stats.
 Identities = 14/83 (16%), Positives = 26/83 (31%), Gaps = 2/83 (2%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE--VVGAIKNDIDQKISFVA 60
          +  NIG       +  L    +N+SN  T G+   +   +E   +      + Q ++   
Sbjct: 4  SLLNIGATGLRVADINLQVTGNNISNASTAGYSRQEAVQTENIPMATGAGYLGQGVNVTT 63

Query: 61 SGKEYLSKEVGSFISTGTELDFA 83
            + Y         S       A
Sbjct: 64 VKRIYDQFLTAQVQSGQAASSAA 86


>gi|291519600|emb|CBK74821.1| flagellar basal-body rod protein FlgB [Butyrivibrio fibrisolvens
          16/4]
          Length = 132

 Score = 42.2 bits (97), Expect = 0.065,   Method: Composition-based stats.
 Identities = 10/35 (28%), Positives = 21/35 (60%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV 45
          A  A  +R + + +N++N DT G++   ++F  V+
Sbjct: 16 AADASWRRQTLILNNLANDDTPGYKRKDIEFGSVL 50


>gi|288962672|ref|YP_003452966.1| flagellar hook-associated protein 1 [Azospirillum sp. B510]
 gi|288914938|dbj|BAI76422.1| flagellar hook-associated protein 1 [Azospirillum sp. B510]
          Length = 465

 Score = 42.2 bits (97), Expect = 0.065,   Method: Composition-based stats.
 Identities = 9/49 (18%), Positives = 22/49 (44%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          +    L+     +Q+ + ++ N++N  T G+   ++  S V  A +   
Sbjct: 6  ALTAALSGLRTTQQQAAMLSHNLANATTAGYVRRELDLSAVTTAGRGAG 54


>gi|260779349|ref|ZP_05888241.1| flagellar basal-body rod protein FlgC [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260605513|gb|EEX31808.1| flagellar basal-body rod protein FlgC [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 144

 Score = 42.2 bits (97), Expect = 0.065,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 19/43 (44%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   + + + EM  M+  T+ F +   ++   +      +R
Sbjct: 97  GYVYYPDIDVVSEMADMMSATRSFETNVEVLSNVKSMQQGLLR 139



 Score = 38.7 bits (88), Expect = 0.72,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 6/65 (9%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          I  +A  A   RL+TVA N++N D V       ++ +K  F+ V    +    ++    A
Sbjct: 9  IAGSAMNAQTVRLNTVASNLANADAVSANPDDAYKALKPVFATVYSKTQLSASKESYPNA 68

Query: 61 SGKEY 65
            +  
Sbjct: 69 EVRIV 73


>gi|118475637|ref|YP_891881.1| flagellar basal body rod protein FlgB [Campylobacter fetus subsp.
          fetus 82-40]
 gi|118414863|gb|ABK83283.1| flagellar basal-body rod protein FlgB [Campylobacter fetus subsp.
          fetus 82-40]
          Length = 146

 Score = 42.2 bits (97), Expect = 0.065,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 6/64 (9%)

Query: 1  MQTSFNIGLA------AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54
          M   F+   +      A      R   +A N++N DT  +++  V F   + A KN+I  
Sbjct: 1  MYAGFSTSKSKQLVEAALEGRVLRQKLIASNIANIDTPFYKSKDVDFESALIAKKNEIYS 60

Query: 55 KISF 58
          K S 
Sbjct: 61 KNSG 64


>gi|326796591|ref|YP_004314411.1| flagellar hook-associated protein FlgK [Marinomonas mediterranea
          MMB-1]
 gi|326547355|gb|ADZ92575.1| flagellar hook-associated protein FlgK [Marinomonas mediterranea
          MMB-1]
          Length = 659

 Score = 42.2 bits (97), Expect = 0.066,   Method: Composition-based stats.
 Identities = 17/44 (38%), Positives = 24/44 (54%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46
          +  NIGL+       R+STV  N+SN DT G+   +   S V+G
Sbjct: 4  SLLNIGLSGLQTSSARISTVGQNVSNVDTEGYNRQETATSSVLG 47


>gi|308063903|gb|ADO05790.1| flagellar hook-associated protein FlgK [Helicobacter pylori Sat464]
          Length = 606

 Score = 42.2 bits (97), Expect = 0.066,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 14/37 (37%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  +   EM  +I     + +   +I   ++ +   +
Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVISAIDRMIDTLL 602



 Score = 36.8 bits (83), Expect = 2.6,   Method: Composition-based stats.
 Identities = 6/29 (20%), Positives = 11/29 (37%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTD 30
           +S N       A +  +    +N+SN  
Sbjct: 5  LSSLNASYTGLQAHQSMVDVTGNNISNAS 33


>gi|188527901|ref|YP_001910588.1| flagellar hook-associated protein FlgK [Helicobacter pylori Shi470]
 gi|188144141|gb|ACD48558.1| flagellar hook-associated protein FlgK [Helicobacter pylori Shi470]
 gi|308062395|gb|ADO04283.1| flagellar hook-associated protein FlgK [Helicobacter pylori Cuz20]
          Length = 606

 Score = 42.2 bits (97), Expect = 0.066,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 14/37 (37%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  +   EM  +I     + +   +I   ++ +   +
Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVISAIDRMIDTLL 602



 Score = 36.8 bits (83), Expect = 2.6,   Method: Composition-based stats.
 Identities = 6/29 (20%), Positives = 11/29 (37%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTD 30
           +S N       A +  +    +N+SN  
Sbjct: 5  LSSLNASYTGLQAHQSMVDVTGNNISNAS 33


>gi|119503642|ref|ZP_01625725.1| flagellar basal-body rod protein FlgC [marine gamma proteobacterium
           HTCC2080]
 gi|119460704|gb|EAW41796.1| flagellar basal-body rod protein FlgC [marine gamma proteobacterium
           HTCC2080]
          Length = 134

 Score = 42.2 bits (97), Expect = 0.066,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 39/106 (36%), Gaps = 6/106 (5%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKIS 57
           S +I   A  A   R++T+A NM+N ++V       F+     F  V+    + +  +++
Sbjct: 6   SMSIAGTALSAQTTRINTIASNMANANSVSSTAEDTFKARAPIFQAVLEGESDQLGVRVT 65

Query: 58  FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103
            +        +E         E  F  + D     +    +  +R 
Sbjct: 66  SIEEVGGEARQEFEPAHPLANEEGFIYKPDIDVTQQMANMMSASRS 111



 Score = 39.1 bits (89), Expect = 0.56,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           GF+   + +   +M  M+  ++ F S   +I+ +++  L  + 
Sbjct: 89  GFIYKPDIDVTQQMANMMSASRSFQSAIEVINTSKQLALRTLT 131


>gi|23008564|ref|ZP_00049957.1| COG1558: Flagellar basal body rod protein [Magnetospirillum
           magnetotacticum MS-1]
          Length = 118

 Score = 42.2 bits (97), Expect = 0.066,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 19/47 (40%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           G ++  N N + EM  M    + + +   +I +    +   I  + S
Sbjct: 72  GNVKLPNVNMLVEMADMREANRSYEANLQVIKQARAMVASVIDLLKS 118


>gi|53717911|ref|YP_106897.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei
           K96243]
 gi|76809258|ref|YP_331876.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei
           1710b]
 gi|134283584|ref|ZP_01770283.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
           305]
 gi|167717657|ref|ZP_02400893.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei
           DM98]
 gi|167736700|ref|ZP_02409474.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei
           14]
 gi|167843905|ref|ZP_02469413.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei
           B7210]
 gi|167909124|ref|ZP_02496215.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei
           112]
 gi|254262000|ref|ZP_04953054.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
           1710a]
 gi|254295811|ref|ZP_04963268.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
           406e]
 gi|52208325|emb|CAH34258.1| putative flagellar basal-body rod protein [Burkholderia
           pseudomallei K96243]
 gi|76578711|gb|ABA48186.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
           1710b]
 gi|134244993|gb|EBA45088.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
           305]
 gi|157805665|gb|EDO82835.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
           406e]
 gi|254220689|gb|EET10073.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
           1710a]
          Length = 163

 Score = 42.2 bits (97), Expect = 0.067,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 27/93 (29%), Gaps = 1/93 (1%)

Query: 11  AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
           A      R   ++ N++N DT G+R   V FS  +           +  A+         
Sbjct: 15  ALDVRAYRQELLSSNIANADTPGYRARDVDFSSTLARALKQDGAASAGNAAQLPLAQPAG 74

Query: 71  GSFISTGTELDFA-LEGDAWFALESPRGIILTR 102
            +   +      A L G+              R
Sbjct: 75  VASGMSMATTSGAHLAGNVKLIPTGGPSDDYGR 107


>gi|294675565|ref|YP_003576180.1| flagellar hook-associated protein FlgK [Rhodobacter capsulatus SB
          1003]
 gi|294474385|gb|ADE83773.1| flagellar hook-associated protein FlgK [Rhodobacter capsulatus SB
          1003]
          Length = 484

 Score = 42.2 bits (97), Expect = 0.067,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 24/51 (47%), Gaps = 1/51 (1%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGF-RTIKVKFSEVVGAIKNDI 52
          ++FN  ++   A  ++   V+ N++N  T G+ R      S+ +G     +
Sbjct: 5  SAFNFAISGLTASSRKAEVVSSNIANAMTEGYARRELSIASQTLGGTGGGV 55



 Score = 37.2 bits (84), Expect = 1.9,   Method: Composition-based stats.
 Identities = 17/138 (12%), Positives = 42/138 (30%), Gaps = 11/138 (7%)

Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171
           G +   +   P    +S  ++             G I        T        + G   
Sbjct: 345 GRIRMNAIVDPEQGGSSWHLRDGLMAAAPGAVSDGTILNALSAALTRESAPASGNYGSAL 404

Query: 172 RENSGISPNIPPTPLEDLSGVTVKRGF--------LEDS---NANSMYEMGQMIHLTQKF 220
           R  SG++  +            + +G+         E S     ++ YEM  ++ + + +
Sbjct: 405 RSASGLAAELLSFASSGRQSAELTQGYATARHEALTEMSLADGVDTDYEMQSLLVIEKAY 464

Query: 221 NSITTLIDENEKSMLEAI 238
            +   ++   +  + E +
Sbjct: 465 AANAKVVQTIDAMLQELL 482


>gi|326796600|ref|YP_004314420.1| flagellar basal-body rod protein FlgB [Marinomonas mediterranea
          MMB-1]
 gi|326547364|gb|ADZ92584.1| flagellar basal-body rod protein FlgB [Marinomonas mediterranea
          MMB-1]
          Length = 131

 Score = 42.2 bits (97), Expect = 0.068,   Method: Composition-based stats.
 Identities = 11/73 (15%), Positives = 28/73 (38%)

Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIS 75
            R S +A+N++N DT  ++   + F  ++ +    +D   +         +      + 
Sbjct: 20 SARASVLANNIANADTPHYKARDITFDSMLQSEVKCLDLAGNDDQHIDGSSTFGSDDALL 79

Query: 76 TGTELDFALEGDA 88
                 +L+G+ 
Sbjct: 80 YRNPSQPSLDGNT 92


>gi|317009731|gb|ADU80311.1| flagellar hook-associated protein FlgK [Helicobacter pylori India7]
          Length = 606

 Score = 42.2 bits (97), Expect = 0.068,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 14/37 (37%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  +   EM  +I     + +   +I   ++ +   +
Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVISAIDRMIDTLL 602



 Score = 39.5 bits (90), Expect = 0.44,   Method: Composition-based stats.
 Identities = 6/29 (20%), Positives = 11/29 (37%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTD 30
           +S N       A +  +    +N+SN  
Sbjct: 5  LSSLNTSYTGLQAHQNMVDVTGNNISNAS 33


>gi|254516987|ref|ZP_05129045.1| flagellar basal-body rod protein FlgC [gamma proteobacterium
          NOR5-3]
 gi|219674492|gb|EED30860.1| flagellar basal-body rod protein FlgC [gamma proteobacterium
          NOR5-3]
          Length = 140

 Score = 42.2 bits (97), Expect = 0.068,   Method: Composition-based stats.
 Identities = 10/59 (16%), Positives = 23/59 (38%), Gaps = 6/59 (10%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56
          +  +   +  A  QRL+T++ N++N + V       +R     F  ++  +        
Sbjct: 6  AIGVAATSLDAQSQRLNTISSNLANANAVSSSAEETYRAQYPVFETMLNDLTTGNGADG 64



 Score = 40.2 bits (92), Expect = 0.23,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 20/43 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           GF+     NS+ EM  M+  ++ +      ++  ++ +L  + 
Sbjct: 95  GFIYRPAINSVEEMANMMEASRSYQDSIEAMNTAKQLILRTLT 137


>gi|119385424|ref|YP_916480.1| flagellar hook-associated protein FlgK [Paracoccus denitrificans
          PD1222]
 gi|119375191|gb|ABL70784.1| flagellar hook-associated protein FlgK [Paracoccus denitrificans
          PD1222]
          Length = 486

 Score = 42.2 bits (97), Expect = 0.068,   Method: Composition-based stats.
 Identities = 7/51 (13%), Positives = 21/51 (41%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
          ++ +  ++   A  + +  V+ N++N  T G    ++  S         ++
Sbjct: 5  SAISNAVSGLTAASRGIEIVSSNIANALTPGHARRELDLSSRPSEHGGGVN 55



 Score = 37.9 bits (86), Expect = 1.2,   Method: Composition-based stats.
 Identities = 5/36 (13%), Positives = 14/36 (38%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +S  EM  ++ L + + +   +       +   +R
Sbjct: 449 VDSDKEMESLLALERAYAANAKVFQTANDMLDAILR 484


>gi|46204472|ref|ZP_00049951.2| COG1256: Flagellar hook-associated protein [Magnetospirillum
          magnetotacticum MS-1]
          Length = 181

 Score = 42.2 bits (97), Expect = 0.068,   Method: Composition-based stats.
 Identities = 7/31 (22%), Positives = 16/31 (51%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGF 34
          +F+   A     + ++  V+ N++N  T G+
Sbjct: 5  AFSTATAGLRVTQAQIGVVSQNIANVGTAGY 35


>gi|261341488|ref|ZP_05969346.1| flagellar hook-associated protein FlgK [Enterobacter cancerogenus
          ATCC 35316]
 gi|288316284|gb|EFC55222.1| flagellar hook-associated protein FlgK [Enterobacter cancerogenus
          ATCC 35316]
          Length = 456

 Score = 42.2 bits (97), Expect = 0.069,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 21/53 (39%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54
              NI  +   A +  +S  + N+SN  T G+    +  S VV   +  +  
Sbjct: 1  MNMINIAWSGLQAAQFGMSVTSMNISNALTPGYSRQGIIQSSVVTMGQGGMSA 53


>gi|293395580|ref|ZP_06639863.1| flagellar basal-body rod protein FlgB [Serratia odorifera DSM
          4582]
 gi|291421899|gb|EFE95145.1| flagellar basal-body rod protein FlgB [Serratia odorifera DSM
          4582]
          Length = 137

 Score = 42.2 bits (97), Expect = 0.069,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 23/65 (35%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   +A N++N DT G++   + F+  +  +        S VA          
Sbjct: 15 ALNLRAQRQEILAGNIANADTPGYQARDIDFASQLNKVMAQGRASGSGVALSLTSARHIP 74

Query: 71 GSFIS 75
             + 
Sbjct: 75 AQNLQ 79


>gi|94312675|ref|YP_585884.1| flagellar hook-filament junction protein [Cupriavidus
          metallidurans CH34]
 gi|93356527|gb|ABF10615.1| flagellar hook-filament junction protein [Cupriavidus
          metallidurans CH34]
          Length = 631

 Score = 42.2 bits (97), Expect = 0.069,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 19/51 (37%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
           + FNIGL+     +  L+T   N SN  T G+       +   G      
Sbjct: 1  MSLFNIGLSGLNVAQNALTTTGHNFSNAATPGYTRQSTIIASAGGQFTGSG 51



 Score = 39.5 bits (90), Expect = 0.40,   Method: Composition-based stats.
 Identities = 5/38 (13%), Positives = 12/38 (31%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           S  N   E   ++   Q + +   +I      +   + 
Sbjct: 592 SGVNMDEETVNLLKFQQLYQANAKVIQTASTIIDTLLS 629


>gi|299068738|emb|CBJ39977.1| flagellar hook-filament junction protein 1 [Ralstonia
          solanacearum CMR15]
          Length = 642

 Score = 42.2 bits (97), Expect = 0.070,   Method: Composition-based stats.
 Identities = 14/83 (16%), Positives = 26/83 (31%), Gaps = 2/83 (2%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE--VVGAIKNDIDQKISFVA 60
          +  NIG       +  L    +N+SN  T G+   +   +E   +      + Q ++   
Sbjct: 4  SLLNIGATGLRVADINLQVTGNNISNASTAGYSRQEAVQTENIPMATGAGYLGQGVNVTT 63

Query: 61 SGKEYLSKEVGSFISTGTELDFA 83
            + Y         S       A
Sbjct: 64 VKRIYDQFLTAQVQSGQAASSAA 86


>gi|146307872|ref|YP_001188337.1| flagellar basal body rod protein FlgB [Pseudomonas mendocina ymp]
 gi|145576073|gb|ABP85605.1| flagellar basal-body rod protein FlgB [Pseudomonas mendocina ymp]
          Length = 135

 Score = 42.2 bits (97), Expect = 0.070,   Method: Composition-based stats.
 Identities = 9/33 (27%), Positives = 18/33 (54%)

Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK 49
          QR   +A+N++N DT  ++   + F+ V+    
Sbjct: 21 QRAEVLANNIANADTPNYKARDLDFASVLAEQN 53


>gi|297580846|ref|ZP_06942771.1| flagellar basal-body rod protein FlgB [Vibrio cholerae RC385]
 gi|297534672|gb|EFH73508.1| flagellar basal-body rod protein FlgB [Vibrio cholerae RC385]
          Length = 131

 Score = 42.2 bits (97), Expect = 0.070,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 18/38 (47%)

Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
          E+    +A N++  +T GF+   + F + + A  +   
Sbjct: 20 ERNSEVIATNIAQANTPGFKAKGMDFQKALQAASSGAS 57


>gi|94495405|ref|ZP_01301985.1| flagellar hook-associated protein 1 [Sphingomonas sp. SKA58]
 gi|94424793|gb|EAT09814.1| flagellar hook-associated protein 1 [Sphingomonas sp. SKA58]
          Length = 445

 Score = 42.2 bits (97), Expect = 0.071,   Method: Composition-based stats.
 Identities = 29/241 (12%), Positives = 71/241 (29%), Gaps = 25/241 (10%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M   F IG +   A    ++ +++N++N  T G+    V  +E             S ++
Sbjct: 1   MSDLFIIGSSGTKAYRTAMAAISENIANAGTDGYARRTVTTAE--------SGASTSTMS 52

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
                 +      +      D  L  DA            T   R+    + ++  +S  
Sbjct: 53  LYIAKANFGGTQVMGVDRASDPYL--DATVRTTGMNLGSATARLRWLTDAETAMNDSSTG 110

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
              L  +             +   +         +A     S + +   +   + GI+  
Sbjct: 111 VGQLMTSMFQNMEKLAASPGDTSLRVTTLDSISRVAQ----SFNQTAADLTNVSDGIATE 166

Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
              +       ++         N N+      ++      ++   L+D  + ++ +   N
Sbjct: 167 ATASVQTINRSLSALA------NINNS-----LLRAQPGTSAYAQLLDSRDAALQDLSEN 215

Query: 241 I 241
           +
Sbjct: 216 L 216


>gi|298530646|ref|ZP_07018048.1| flagellar basal-body rod protein FlgB [Desulfonatronospira
          thiodismutans ASO3-1]
 gi|298510020|gb|EFI33924.1| flagellar basal-body rod protein FlgB [Desulfonatronospira
          thiodismutans ASO3-1]
          Length = 136

 Score = 42.2 bits (97), Expect = 0.071,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 20/33 (60%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50
          R + V+ N++N  T G++  +V+F E + +  N
Sbjct: 22 RQNVVSSNLANVKTPGYQARRVEFEEQLQSALN 54


>gi|150021010|ref|YP_001306364.1| flagellar basal-body rod protein FlgB [Thermosipho melanesiensis
          BI429]
 gi|149793531|gb|ABR30979.1| flagellar basal-body rod protein FlgB [Thermosipho melanesiensis
          BI429]
          Length = 127

 Score = 42.2 bits (97), Expect = 0.071,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 21/50 (42%), Gaps = 1/50 (2%)

Query: 1  MQTS-FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK 49
          M  S FN    A     +R    + N++N +T  ++   + F E+    K
Sbjct: 1  MFNSNFNTLKVAMDVALKRQEIHSQNIANAETPNYKRKYIVFEELFNESK 50


>gi|268679766|ref|YP_003304197.1| flagellar hook-associated protein FlgK [Sulfurospirillum deleyianum
           DSM 6946]
 gi|268617797|gb|ACZ12162.1| flagellar hook-associated protein FlgK [Sulfurospirillum deleyianum
           DSM 6946]
          Length = 614

 Score = 42.2 bits (97), Expect = 0.072,   Method: Composition-based stats.
 Identities = 9/70 (12%), Positives = 22/70 (31%)

Query: 169 FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228
              +  S  S         D    +V   +   S  N   E+  +I     +++   +I 
Sbjct: 541 LTTKIGSDASTANSNYDTNDALYSSVYTQYQSVSGVNKDEELANLIQYQSSYSAAAKIIT 600

Query: 229 ENEKSMLEAI 238
             ++ +   +
Sbjct: 601 TIDQMLETLL 610



 Score = 41.8 bits (96), Expect = 0.088,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 34/82 (41%), Gaps = 2/82 (2%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV--KFSEVVGAIKNDIDQKISFVA 60
          ++ N G +A  A +  ++T + N++N D   +   +V    S+ +      I   +S  +
Sbjct: 5  STLNTGTSALNAAQVAVATTSQNIANVDNPYYTRQRVTLSASDALNTKGVSIGTGVSITS 64

Query: 61 SGKEYLSKEVGSFISTGTELDF 82
            + +         ++ T L +
Sbjct: 65 IVRIHDEFVFSKLRTSSTSLAY 86


>gi|167579485|ref|ZP_02372359.1| flagellar basal body rod protein FlgB [Burkholderia thailandensis
           TXDOH]
          Length = 163

 Score = 42.2 bits (97), Expect = 0.072,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 27/93 (29%), Gaps = 1/93 (1%)

Query: 11  AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
           A      R   ++ N++N DT G+R   V FS  +           +  A+         
Sbjct: 15  ALDVRAYRQELLSSNIANADTPGYRARDVDFSSTLARALKQDGAASAGNAAALPLAQPAG 74

Query: 71  GSFISTGTELDFA-LEGDAWFALESPRGIILTR 102
            +   +      A L G+              R
Sbjct: 75  VTSGMSMATTSSAHLAGNVKLIPTGGPSDDYGR 107


>gi|163850060|ref|YP_001638103.1| flagellar basal body rod protein FlgB [Methylobacterium
          extorquens PA1]
 gi|218528663|ref|YP_002419479.1| flagellar basal body rod protein FlgB [Methylobacterium
          chloromethanicum CM4]
 gi|240137194|ref|YP_002961663.1| Flagellar basal-body rod protein flgB [Methylobacterium
          extorquens AM1]
 gi|254559206|ref|YP_003066301.1| flagellar basal-body rod protein flgB [Methylobacterium
          extorquens DM4]
 gi|163661665|gb|ABY29032.1| flagellar basal body rod protein [Methylobacterium extorquens
          PA1]
 gi|218520966|gb|ACK81551.1| flagellar basal body rod protein [Methylobacterium
          chloromethanicum CM4]
 gi|240007160|gb|ACS38386.1| Flagellar basal-body rod protein flgB [Methylobacterium
          extorquens AM1]
 gi|254266484|emb|CAX22248.1| Flagellar basal-body rod protein flgB [Methylobacterium
          extorquens DM4]
          Length = 129

 Score = 42.2 bits (97), Expect = 0.072,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 23/43 (53%), Gaps = 1/43 (2%)

Query: 15 LEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIKNDIDQKI 56
          L  R +T+A N++N +T G++   V  F++V+     D+    
Sbjct: 18 LATRQATIAGNVANANTPGYKARDVMPFAQVLARTGLDMASTA 60


>gi|315281375|ref|ZP_07870012.1| flagellar basal-body rod protein FlgB [Listeria marthii FSL S4-120]
 gi|313614972|gb|EFR88479.1| flagellar basal-body rod protein FlgB [Listeria marthii FSL S4-120]
          Length = 133

 Score = 42.2 bits (97), Expect = 0.073,   Method: Composition-based stats.
 Identities = 12/104 (11%), Positives = 29/104 (27%)

Query: 12  QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
              L+     V+ N++N +T  F+  +  F E  GA      Q  +         + +  
Sbjct: 12  LNYLQTANQVVSSNIANANTPNFKASEASFEESFGASLRASGQSSTESTGNLTKTNTKHL 71

Query: 72  SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115
           +  +T                +     + +        +    +
Sbjct: 72  AGTNTDETNAKITTKSGSINEDGNNVNVTSEMISLTKNNQMYAL 115


>gi|294013084|ref|YP_003546544.1| flagellar basal-body rod protein FlgC [Sphingobium japonicum UT26S]
 gi|292676414|dbj|BAI97932.1| flagellar basal-body rod protein FlgC [Sphingobium japonicum UT26S]
          Length = 138

 Score = 42.2 bits (97), Expect = 0.073,   Method: Composition-based stats.
 Identities = 8/36 (22%), Positives = 18/36 (50%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +S  E+  MI   + + +   +++  +  M+E IR
Sbjct: 100 VDSSAELVDMIETARMYQNNVQVLNTAKSLMMETIR 135



 Score = 35.2 bits (79), Expect = 7.1,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 30/87 (34%), Gaps = 6/87 (6%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSEVVGAIKNDIDQK 55
             F+I   A  A   RL+  A NM+N  +  G     +R IK  F  V  +      + 
Sbjct: 9  MNVFDIAGRAMSAQLVRLNATASNMANAGNVTGSAAEAYRAIKPVFQSVTDSPGVSTVKV 68

Query: 56 ISFVASGKEYLSKEVGSFISTGTELDF 82
           + V +  +   +   +        D 
Sbjct: 69 QNVVTTNAQPTKRHDPNHPLADKNGDV 95


>gi|315125982|ref|YP_004067985.1| LfgC [Pseudoalteromonas sp. SM9913]
 gi|315014496|gb|ADT67834.1| LfgC [Pseudoalteromonas sp. SM9913]
          Length = 138

 Score = 42.2 bits (97), Expect = 0.074,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 24/46 (52%), Gaps = 1/46 (2%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G++  SN N++ EM  M+  ++ + +   ++     SM ++I  + 
Sbjct: 93  GYVFYSNVNALEEMADMMSASRSYQTSVEVMGRVN-SMQQSILKLG 137



 Score = 41.4 bits (95), Expect = 0.12,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 7/56 (12%)

Query: 3  TSFNIGL-AAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKND 51
           S      +A  A   RL T+A N++N DT        ++ +K  FS +    ++ 
Sbjct: 4  NSIYDASGSAMRAQVIRLDTIASNLANADTAAGSEADAYKALKPVFSALYKQTQDS 59


>gi|288960379|ref|YP_003450719.1| flagellar basal-body rod protein [Azospirillum sp. B510]
 gi|288912687|dbj|BAI74175.1| flagellar basal-body rod protein [Azospirillum sp. B510]
          Length = 134

 Score = 42.2 bits (97), Expect = 0.074,   Method: Composition-based stats.
 Identities = 4/43 (9%), Positives = 15/43 (34%)

Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            G +   N +   E    +   + + +   ++   ++ M   +
Sbjct: 88  SGMVAAPNVDLATERITQMAANRAYGANVAVVRTQDEMMKSLL 130


>gi|254785368|ref|YP_003072797.1| flagellar basal-body rod protein FlgB [Teredinibacter turnerae
          T7901]
 gi|237687018|gb|ACR14282.1| flagellar basal-body rod protein FlgB [Teredinibacter turnerae
          T7901]
          Length = 134

 Score = 42.2 bits (97), Expect = 0.074,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 26/64 (40%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
          + +  I  +A     +R   +A N++NTDT G++     F E +       +   S   +
Sbjct: 6  EKALGIHESAMRLRGERAGMLASNLANTDTPGYKARDFNFQEALDRQMTGRNGDFSLQTT 65

Query: 62 GKEY 65
             +
Sbjct: 66 QHAH 69


>gi|220904842|ref|YP_002480154.1| flagellar basal body rod protein FlgB [Desulfovibrio
          desulfuricans subsp. desulfuricans str. ATCC 27774]
 gi|219869141|gb|ACL49476.1| flagellar basal-body rod protein FlgB [Desulfovibrio
          desulfuricans subsp. desulfuricans str. ATCC 27774]
          Length = 137

 Score = 42.2 bits (97), Expect = 0.074,   Method: Composition-based stats.
 Identities = 10/67 (14%), Positives = 22/67 (32%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
                R + +A N++N DT  ++  ++ F + +        +      S +   S    
Sbjct: 16 MNMQLDRQNIIAGNLANIDTPNYKPRELSFEKELQTALGQDMEGQMSRTSAEHIPSTFDP 75

Query: 72 SFISTGT 78
          S      
Sbjct: 76 SSFRPEW 82


>gi|242278417|ref|YP_002990546.1| flagellar hook-associated protein FlgK [Desulfovibrio salexigens
          DSM 2638]
 gi|242121311|gb|ACS79007.1| flagellar hook-associated protein FlgK [Desulfovibrio salexigens
          DSM 2638]
          Length = 583

 Score = 42.2 bits (97), Expect = 0.074,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 31/73 (42%), Gaps = 2/73 (2%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV--VGAIKNDIDQKISFVA 60
           + +IG  A    +  ++T ++N++N++T G++     +  +  + +  N +      VA
Sbjct: 5  NTLSIGQRALANAQVSINTTSNNIANSETEGYQRADAVYDSLGNINSYGNSLGTGADIVA 64

Query: 61 SGKEYLSKEVGSF 73
              +       F
Sbjct: 65 IRANWDRFIEKQF 77



 Score = 36.8 bits (83), Expect = 3.0,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 13/37 (35%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N   E+  +    Q++ +   +I      +   +
Sbjct: 544 SGVNVDEELVNLTRHQQQYEAACQIISVTRDMIDTVL 580


>gi|255521665|ref|ZP_05388902.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
          FSL J1-175]
          Length = 357

 Score = 41.8 bits (96), Expect = 0.074,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 18/42 (42%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46
          FN  L+   A +        N+SN +T G+    V  + V G
Sbjct: 6  FNTSLSGMSAAQIANMVAQQNISNMNTPGYIRQAVDQTAVYG 47


>gi|157147096|ref|YP_001454415.1| flagellar hook-associated protein FlgK [Citrobacter koseri ATCC
          BAA-895]
 gi|157084301|gb|ABV13979.1| hypothetical protein CKO_02873 [Citrobacter koseri ATCC BAA-895]
          Length = 461

 Score = 41.8 bits (96), Expect = 0.074,   Method: Composition-based stats.
 Identities = 10/82 (12%), Positives = 23/82 (28%), Gaps = 1/82 (1%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           +  NI  +   A +  ++  + N++N  T G+    +     +G +        + V  
Sbjct: 1  MSMINIAFSGLQAAQVGMNVTSMNIANLLTPGYSRQGII-QSSIGPMGEAGFTAGNGVQV 59

Query: 62 GKEYLSKEVGSFISTGTELDFA 83
                               A
Sbjct: 60 DSIRRISSQYLVNQVWQTNSKA 81


>gi|114570487|ref|YP_757167.1| flagellar basal body rod protein FlgC [Maricaulis maris MCS10]
 gi|114340949|gb|ABI66229.1| flagellar basal-body rod protein FlgC [Maricaulis maris MCS10]
          Length = 137

 Score = 41.8 bits (96), Expect = 0.076,   Method: Composition-based stats.
 Identities = 8/46 (17%), Positives = 21/46 (45%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G+++ SN  ++ EM  M    + + +   +I+   +    A+  + 
Sbjct: 91  GYVQYSNVQTLVEMMDMREAMRSYEANLNMIENARRMQERALDLLR 136



 Score = 37.9 bits (86), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/104 (11%), Positives = 27/104 (25%), Gaps = 8/104 (7%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFS-EVVGAIKNDIDQKI 56
             I      A   R+  +++N++N D+         +R     F  E+  A   +  +  
Sbjct: 8   MQISAFGMRAQAARMRIISENIANADSTAREAGGDPYRRQVPVFEAELDRATGLNAVRMT 67

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL 100
                  E+  +      +   E                    +
Sbjct: 68  DVAHDQSEFTLEYDPGHPAANAEGYVQYSNVQTLVEMMDMREAM 111


>gi|329297213|ref|ZP_08254549.1| flagellar basal body rod protein FlgB [Plautia stali symbiont]
          Length = 137

 Score = 41.8 bits (96), Expect = 0.076,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 26/75 (34%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
            +   G  A     QR   +A N++N DT G++   + F+  +     +   + S +A 
Sbjct: 6  DAALRFGTEALNLRAQRQEILASNIANADTPGYQARDIDFASQLSKAMQNGRAEGSSLAL 65

Query: 62 GKEYLSKEVGSFIST 76
                       S 
Sbjct: 66 NVTSSRHIEAQTNSQ 80


>gi|209521586|ref|ZP_03270284.1| flagellar basal-body rod protein FlgB [Burkholderia sp. H160]
 gi|209497969|gb|EDZ98126.1| flagellar basal-body rod protein FlgB [Burkholderia sp. H160]
          Length = 165

 Score = 41.8 bits (96), Expect = 0.076,   Method: Composition-based stats.
 Identities = 8/51 (15%), Positives = 19/51 (37%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
          A      R   ++ N++N DT G++   + F+  +           +   +
Sbjct: 15 AMDVRAYRQELLSSNIANADTPGYKARDIDFASSLAGALKKTGGSTAGQGT 65


>gi|117621121|ref|YP_857337.1| flagellar hook-associated protein FlgK [Aeromonas hydrophila
          subsp. hydrophila ATCC 7966]
 gi|117562528|gb|ABK39476.1| flagellar hook-associated protein FlgK [Aeromonas hydrophila
          subsp. hydrophila ATCC 7966]
          Length = 666

 Score = 41.8 bits (96), Expect = 0.076,   Method: Composition-based stats.
 Identities = 9/50 (18%), Positives = 23/50 (46%), Gaps = 4/50 (8%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54
            IG +  +A ++ L T ++N+ N ++ G+   +     ++    N +  
Sbjct: 6  LGIGTSGVMAQQRLLQTTSNNIVNVNSQGYVRERT----LIYTNANGLGT 51


>gi|32474824|ref|NP_867818.1| flagellar basal-body rod potein FlgC [Rhodopirellula baltica SH
          1]
 gi|32445364|emb|CAD75365.1| flagellar basal-body rod potein FlgC [Rhodopirellula baltica SH
          1]
 gi|327539962|gb|EGF26561.1| flagellar basal-body rod protein FlgC [Rhodopirellula baltica
          WH47]
          Length = 143

 Score = 41.8 bits (96), Expect = 0.076,   Method: Composition-based stats.
 Identities = 8/30 (26%), Positives = 18/30 (60%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTD 30
          M ++ +I  +A +A   RL+ ++ N++N  
Sbjct: 5  MISALDISTSALVAQRTRLNAISGNIANIS 34



 Score = 41.4 bits (95), Expect = 0.12,   Method: Composition-based stats.
 Identities = 6/46 (13%), Positives = 21/46 (45%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G++   N +   +M   +  T+ + +   +I+ ++    + +  +A
Sbjct: 98  GYVAYPNIDLTTQMVDALESTRAYEANVGVIEISKGMSRQRLAILA 143


>gi|260574406|ref|ZP_05842410.1| flagellar basal body rod protein [Rhodobacter sp. SW2]
 gi|259023302|gb|EEW26594.1| flagellar basal body rod protein [Rhodobacter sp. SW2]
          Length = 126

 Score = 41.8 bits (96), Expect = 0.077,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 18 RLSTVADNMSNTDTVGFRT-IKVKFSEVVGAIKNDIDQKISF 58
          R   +A N++N DT GF+      F+E   A +  +      
Sbjct: 21 RQEVIARNVANADTPGFKAQDLPDFAETYQAGEGAMRATRPG 62


>gi|149178731|ref|ZP_01857314.1| flagellar basal-body rod potein FlgC [Planctomyces maris DSM 8797]
 gi|148842429|gb|EDL56809.1| flagellar basal-body rod potein FlgC [Planctomyces maris DSM 8797]
          Length = 137

 Score = 41.8 bits (96), Expect = 0.077,   Method: Composition-based stats.
 Identities = 6/48 (12%), Positives = 21/48 (43%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           + G +   N + + E    +   + + +  + +D  ++    ++R +A
Sbjct: 90  QDGNVTYPNIDLVTEFVNALEAGRAYEANISALDITKEMFSTSLRILA 137



 Score = 41.0 bits (94), Expect = 0.14,   Method: Composition-based stats.
 Identities = 9/30 (30%), Positives = 18/30 (60%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTD 30
          M    +I  +A +A  QR++T+A N++  +
Sbjct: 1  MLKGIDISTSALVAQRQRMNTIAGNIAAVN 30


>gi|259907631|ref|YP_002647987.1| Flagellar basal-body rod protein FlgB [Erwinia pyrifoliae Ep1/96]
 gi|224963253|emb|CAX54737.1| Flagellar basal-body rod protein FlgB [Erwinia pyrifoliae Ep1/96]
 gi|283477473|emb|CAY73389.1| Flagellar basal-body rod protein flgB [Erwinia pyrifoliae DSM
          12163]
          Length = 135

 Score = 41.8 bits (96), Expect = 0.078,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 23/50 (46%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          A   L +R   +A N++N DT G+    + FS+ +     +     S V+
Sbjct: 15 ALSLLSRRQEVLASNIANADTPGYMARDIDFSQQLKNTLANQSMAKSPVS 64


>gi|239815253|ref|YP_002944163.1| flagellar basal body protein [Variovorax paradoxus S110]
 gi|239801830|gb|ACS18897.1| flagellar basal body protein [Variovorax paradoxus S110]
          Length = 127

 Score = 41.8 bits (96), Expect = 0.079,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 22/49 (44%)

Query: 9  LAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS 57
            A  A   R   +A N++N + VG+   +V F + +   ++ + Q   
Sbjct: 14 AMALDAASLRQQAIATNIANANAVGYVPQRVSFEDQLADARSTLAQSGR 62


>gi|254457451|ref|ZP_05070879.1| flagellar hook-associated protein FlgK [Campylobacterales bacterium
           GD 1]
 gi|207086243|gb|EDZ63527.1| flagellar hook-associated protein FlgK [Campylobacterales bacterium
           GD 1]
          Length = 626

 Score = 41.8 bits (96), Expect = 0.079,   Method: Composition-based stats.
 Identities = 6/37 (16%), Positives = 14/37 (37%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  +   EM  +I     + +   +I   ++ M   +
Sbjct: 586 SKVSLDEEMTNLIKYQTSYGAAAKIITTIDQMMQTLL 622



 Score = 39.1 bits (89), Expect = 0.59,   Method: Composition-based stats.
 Identities = 8/82 (9%), Positives = 29/82 (35%), Gaps = 2/82 (2%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV--VGAIKNDIDQKISFVA 60
           + +IG +     +  ++T   N+SN +  G+   +V  +    +     ++      + 
Sbjct: 6  NALHIGYSGLNVAQIGINTTGHNISNAEVDGYTRQRVITAAATPLQTYPGNVGNGAQVMD 65

Query: 61 SGKEYLSKEVGSFISTGTELDF 82
            + + +     +       ++
Sbjct: 66 IKRVFDNFVFDRYTDISETKEY 87


>gi|13472593|ref|NP_104160.1| flagellar hook-associated protein FlgK [Mesorhizobium loti
           MAFF303099]
 gi|14023339|dbj|BAB49946.1| flagellar hook-associated protein 1; FlgK [Mesorhizobium loti
           MAFF303099]
          Length = 484

 Score = 41.8 bits (96), Expect = 0.079,   Method: Composition-based stats.
 Identities = 10/144 (6%), Positives = 32/144 (22%), Gaps = 4/144 (2%)

Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162
           +     +  G+                            +     + +        G+ +
Sbjct: 341 NAAMDPSAGGNPTLLRDGGANGAAYVANTTGGPSYSSLLIAYGDRLDKPMTFDPAAGISA 400

Query: 163 VDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLED-SN---ANSMYEMGQMIHLTQ 218
                 +       +            +   + +   E  SN    N   EM  M+ L  
Sbjct: 401 TSSVSDYAANSIGWLQSMRQQASTAADAKEALAQRSSEALSNATGVNVDQEMSLMLDLEH 460

Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242
            + +   ++   +  +   +  + 
Sbjct: 461 TYQASARMMKTVDDMLTALLNAVG 484


>gi|153213631|ref|ZP_01948904.1| flagellar basal-body rod protein FlgB [Vibrio cholerae 1587]
 gi|153825327|ref|ZP_01977994.1| flagellar basal-body rod protein FlgB [Vibrio cholerae MZO-2]
 gi|153829345|ref|ZP_01982012.1| flagellar basal-body rod protein FlgB [Vibrio cholerae 623-39]
 gi|229513844|ref|ZP_04403306.1| flagellar basal-body rod protein FlgB [Vibrio cholerae TMA 21]
 gi|229522149|ref|ZP_04411566.1| flagellar basal-body rod protein FlgB [Vibrio cholerae TM
          11079-80]
 gi|229524195|ref|ZP_04413600.1| flagellar basal-body rod protein FlgB [Vibrio cholerae bv.
          albensis VL426]
 gi|229528795|ref|ZP_04418185.1| flagellar basal-body rod protein FlgB [Vibrio cholerae 12129(1)]
 gi|254286491|ref|ZP_04961448.1| flagellar basal-body rod protein FlgB [Vibrio cholerae AM-19226]
 gi|262191692|ref|ZP_06049868.1| flagellar basal-body rod protein FlgB [Vibrio cholerae CT
          5369-93]
 gi|124115830|gb|EAY34650.1| flagellar basal-body rod protein FlgB [Vibrio cholerae 1587]
 gi|148875186|gb|EDL73321.1| flagellar basal-body rod protein FlgB [Vibrio cholerae 623-39]
 gi|149741011|gb|EDM55080.1| flagellar basal-body rod protein FlgB [Vibrio cholerae MZO-2]
 gi|150423440|gb|EDN15384.1| flagellar basal-body rod protein FlgB [Vibrio cholerae AM-19226]
 gi|229332569|gb|EEN98055.1| flagellar basal-body rod protein FlgB [Vibrio cholerae 12129(1)]
 gi|229337776|gb|EEO02793.1| flagellar basal-body rod protein FlgB [Vibrio cholerae bv.
          albensis VL426]
 gi|229341074|gb|EEO06079.1| flagellar basal-body rod protein FlgB [Vibrio cholerae TM
          11079-80]
 gi|229349025|gb|EEO13982.1| flagellar basal-body rod protein FlgB [Vibrio cholerae TMA 21]
 gi|262032431|gb|EEY50993.1| flagellar basal-body rod protein FlgB [Vibrio cholerae CT
          5369-93]
 gi|327484719|gb|AEA79126.1| Flagellar basal-body rod protein FlgB [Vibrio cholerae LMA3894-4]
          Length = 131

 Score = 41.8 bits (96), Expect = 0.079,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 18/38 (47%)

Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
          E+    +A N++  +T GF+   + F + + A  +   
Sbjct: 20 ERNSEVIATNIAQANTPGFKAKGMDFQKALQAASSGAS 57


>gi|187925754|ref|YP_001897396.1| flagellar hook-associated protein FlgK [Burkholderia phytofirmans
          PsJN]
 gi|187716948|gb|ACD18172.1| flagellar hook-associated protein FlgK [Burkholderia phytofirmans
          PsJN]
          Length = 657

 Score = 41.8 bits (96), Expect = 0.080,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 24/70 (34%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M    N+GL+   A +  L+T   N+SN  T G+      ++E  G              
Sbjct: 1  MSNLINLGLSGLNAAQWGLTTTGQNISNASTPGYTIETPVYAESGGQYTGSGYLPQGVST 60

Query: 61 SGKEYLSKEV 70
          +       + 
Sbjct: 61 TTVTRQYSQY 70



 Score = 35.6 bits (80), Expect = 5.8,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 13/37 (35%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N   E   ++   Q + + + +I   +      +
Sbjct: 617 SGVNINEEAANLLQYQQLYQANSKVIQTAQTLFQTIL 653


>gi|52080220|ref|YP_079011.1| flagellar basal body rod protein FlgB [Bacillus licheniformis
          ATCC 14580]
 gi|52785597|ref|YP_091426.1| flagellar basal body rod protein FlgB [Bacillus licheniformis
          ATCC 14580]
 gi|319646001|ref|ZP_08000231.1| FlgB protein [Bacillus sp. BT1B_CT2]
 gi|52003431|gb|AAU23373.1| flagellar basal-body rod protein [Bacillus licheniformis ATCC
          14580]
 gi|52348099|gb|AAU40733.1| FlgB [Bacillus licheniformis ATCC 14580]
 gi|317391751|gb|EFV72548.1| FlgB protein [Bacillus sp. BT1B_CT2]
          Length = 129

 Score = 41.8 bits (96), Expect = 0.080,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 20/44 (45%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54
          A      +   + +N++N DT  ++  KV F  V+    + I+ 
Sbjct: 14 ALNQANIKQKVITNNLANVDTPNYKAKKVSFKNVLNEESSRINA 57


>gi|304321121|ref|YP_003854764.1| flagellar hook-associated protein [Parvularcula bermudensis
          HTCC2503]
 gi|303300023|gb|ADM09622.1| flagellar hook-associated protein [Parvularcula bermudensis
          HTCC2503]
          Length = 481

 Score = 41.8 bits (96), Expect = 0.080,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 28/82 (34%), Gaps = 1/82 (1%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGF-RTIKVKFSEVVGAIKNDIDQKISFVAS 61
          ++ +I  +   A   R  T A N++N    G+ R   V    VVG+    +    +   +
Sbjct: 5  SALSIANSGLAAASIRAQTTASNIANATVEGYSRRDVVLSERVVGSTGIGVSVVGTERVT 64

Query: 62 GKEYLSKEVGSFISTGTELDFA 83
               S  +    +       A
Sbjct: 65 SPVLTSTRIRLEAADSFATQTA 86



 Score = 35.6 bits (80), Expect = 5.4,   Method: Composition-based stats.
 Identities = 14/132 (10%), Positives = 34/132 (25%), Gaps = 14/132 (10%)

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
              D      +I            G   Q  ++I   G          +    S +    
Sbjct: 348 VDPDEGGELYRIQAGIGATAPAPSGNGDQLNRLIDAFGAERAAPPALGINGNASAVDLVA 407

Query: 182 PPTPLEDLSGVTVKRGFLEDSN--------------ANSMYEMGQMIHLTQKFNSITTLI 227
                   +    +   L  S                ++  E+ Q++ + Q + +   +I
Sbjct: 408 EVNAAVTEADAEAQDDALYASTRAQLAREEEQAIIGVDTDRELQQLLLIEQAYGANARVI 467

Query: 228 DENEKSMLEAIR 239
              ++ +   +R
Sbjct: 468 QTIDEMLDILMR 479


>gi|322379368|ref|ZP_08053739.1| flagellar basal body rod protein FlgB [Helicobacter suis HS1]
 gi|322380861|ref|ZP_08054951.1| flagellar basal body rod protein FlgB [Helicobacter suis HS5]
 gi|321146712|gb|EFX41522.1| flagellar basal body rod protein FlgB [Helicobacter suis HS5]
 gi|321148186|gb|EFX42715.1| flagellar basal body rod protein FlgB [Helicobacter suis HS1]
          Length = 140

 Score = 41.8 bits (96), Expect = 0.081,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 19/45 (42%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK 55
          A      R   +A N++N DT  +R   V F  ++   K ++   
Sbjct: 13 AMDYRSLRQDLIASNIANVDTPFYRPRDVDFETMLAHKKAEVFDH 57


>gi|228958023|ref|ZP_04119759.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228801648|gb|EEM48529.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
           pakistani str. T13001]
          Length = 166

 Score = 41.8 bits (96), Expect = 0.081,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 29/72 (40%)

Query: 12  QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
              L  + +TV+ N++N +T G++   V F+E +           + + S  +       
Sbjct: 43  MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNEM 102

Query: 72  SFISTGTELDFA 83
              +  T+  +A
Sbjct: 103 HLPTVNTKNTYA 114


>gi|78776765|ref|YP_393080.1| flagellar hook-associated protein FlgK [Sulfurimonas denitrificans
           DSM 1251]
 gi|78497305|gb|ABB43845.1| Flagellar hook-associated protein [Sulfurimonas denitrificans DSM
           1251]
          Length = 628

 Score = 41.8 bits (96), Expect = 0.081,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 15/37 (40%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  +   E+  +I     + + + +I   ++ M   +
Sbjct: 588 SKVSIDEELTNLIKYQTSYGAASKIITTIDQMMQTLL 624



 Score = 38.3 bits (87), Expect = 0.98,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 31/85 (36%), Gaps = 5/85 (5%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE-----VVGAIKNDIDQKIS 57
           S +IG +   A +  +ST + N++N ++ G+   +V  +      +      +  Q + 
Sbjct: 7  NSLSIGYSGLSAAQAGVSTTSHNITNAESEGYTRQRVVTAAATPVNMAPGNVGNGTQIMD 66

Query: 58 FVASGKEYLSKEVGSFISTGTELDF 82
                 ++        +     DF
Sbjct: 67 IARIFDNFVYDRYTGISAEKEYSDF 91


>gi|262396037|ref|YP_003287890.1| flagellar basal-body rod protein FlgC [Vibrio sp. Ex25]
 gi|262339631|gb|ACY53425.1| flagellar basal-body rod protein FlgC [Vibrio sp. Ex25]
          Length = 131

 Score = 41.8 bits (96), Expect = 0.081,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 19/43 (44%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   + + + EM  M+  T+ F +   ++   +      +R
Sbjct: 84  GYVYYPDIDVVAEMADMMSATRSFETNVEVLSNVKSMQQGLLR 126


>gi|254516986|ref|ZP_05129044.1| flagellar basal-body rod protein FlgB [gamma proteobacterium
          NOR5-3]
 gi|219674491|gb|EED30859.1| flagellar basal-body rod protein FlgB [gamma proteobacterium
          NOR5-3]
          Length = 135

 Score = 41.8 bits (96), Expect = 0.081,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 28/78 (35%), Gaps = 2/78 (2%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A  A +  L  +A N++N+DT G++   + FS  +       +      A+         
Sbjct: 21 ALRAQKTEL--LAANIANSDTPGYKARDIDFSAAMANASGAQEALTRTHAAHLSTSGTPG 78

Query: 71 GSFISTGTELDFALEGDA 88
                      +L+G+ 
Sbjct: 79 NVEPMYRVPTQPSLDGNT 96


>gi|304392492|ref|ZP_07374432.1| flagellar hook-associated protein FlgK [Ahrensia sp. R2A130]
 gi|303295122|gb|EFL89482.1| flagellar hook-associated protein FlgK [Ahrensia sp. R2A130]
          Length = 481

 Score = 41.8 bits (96), Expect = 0.083,   Method: Composition-based stats.
 Identities = 7/44 (15%), Positives = 19/44 (43%), Gaps = 3/44 (6%)

Query: 202 SN---ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           SN    N   EM +++ L + + +   ++   ++     + +I 
Sbjct: 438 SNEGGVNIDEEMTRLLQLERAYEASARIVSTVDRLFDTLLASIR 481


>gi|317047688|ref|YP_004115336.1| flagellar basal-body rod protein FlgB [Pantoea sp. At-9b]
 gi|316949305|gb|ADU68780.1| flagellar basal-body rod protein FlgB [Pantoea sp. At-9b]
          Length = 137

 Score = 41.8 bits (96), Expect = 0.083,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 28/78 (35%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
            +   G  A     +R   +A N++N DT G++   + F+  +  +  +   + S +A 
Sbjct: 6  DAALRFGTEALNLRAERQEILASNIANADTPGYQARDIDFASQLSKVMENGRSEGSSLAL 65

Query: 62 GKEYLSKEVGSFISTGTE 79
                       S  + 
Sbjct: 66 NVTSARHIEAQTNSQPSM 83


>gi|296157449|ref|ZP_06840284.1| flagellar hook-associated protein FlgK [Burkholderia sp. Ch1-1]
 gi|295892221|gb|EFG72004.1| flagellar hook-associated protein FlgK [Burkholderia sp. Ch1-1]
          Length = 657

 Score = 41.8 bits (96), Expect = 0.083,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 24/70 (34%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M    N+GL+   A +  L+T   N+SN  T G+      ++E  G              
Sbjct: 1  MSNLINLGLSGLNAAQWGLTTTGQNISNASTPGYTIENPVYAESGGQYTGSGYLPQGVST 60

Query: 61 SGKEYLSKEV 70
          +       + 
Sbjct: 61 TTVTRQYSQY 70



 Score = 35.6 bits (80), Expect = 6.1,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 13/37 (35%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N   E   ++   Q + + + +I   +      +
Sbjct: 617 SGVNINEEAANLLQYQQLYQANSKVIQTAQTLFQTIL 653


>gi|295096228|emb|CBK85318.1| flagellar basal-body rod protein FlgB [Enterobacter cloacae
          subsp. cloacae NCTC 9394]
          Length = 138

 Score = 41.8 bits (96), Expect = 0.083,   Method: Composition-based stats.
 Identities = 12/66 (18%), Positives = 25/66 (37%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   +A N++N DT G++   + FS  +  +      + + V+          
Sbjct: 15 ALNLRAQRQEILAANIANADTPGYQARDIDFSSELKKVMERGRAEGTGVSLALTSSRHIP 74

Query: 71 GSFIST 76
             ++ 
Sbjct: 75 AQAMTA 80


>gi|270487671|ref|ZP_06204745.1| conserved domain protein [Yersinia pestis KIM D27]
 gi|270336175|gb|EFA46952.1| conserved domain protein [Yersinia pestis KIM D27]
          Length = 50

 Score = 41.8 bits (96), Expect = 0.083,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 19/37 (51%)

Query: 199 LEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
           LE SN +++ EM   I L+++F +   ++   E    
Sbjct: 5   LESSNVSAISEMIASISLSRQFEAQIKMMKVAEDLAQ 41


>gi|237799215|ref|ZP_04587676.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
          oryzae str. 1_6]
 gi|331022070|gb|EGI02127.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
          oryzae str. 1_6]
          Length = 192

 Score = 41.8 bits (96), Expect = 0.083,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 35/97 (36%), Gaps = 1/97 (1%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           +  +IGL+   A    ++T+ +N +N DT G+   +V  S     I            +
Sbjct: 1  MSLISIGLSGINASSAAINTIGNNTANVDTAGYSRQQVL-STASAQIALGQGVGYLGTGT 59

Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98
              + +   S++ T  +   AL  DA          
Sbjct: 60 TLSDVRRIYNSYLDTQLQSSTALSADAVAYSGQAGKT 96


>gi|84388097|ref|ZP_00990993.1| flagellar hook-associated protein [Vibrio splendidus 12B01]
 gi|84377164|gb|EAP94034.1| flagellar hook-associated protein [Vibrio splendidus 12B01]
          Length = 626

 Score = 41.8 bits (96), Expect = 0.083,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 32/85 (37%), Gaps = 2/85 (2%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
           N+G  + L  +++L+T   N+SN +T G+    V    V    +         V     
Sbjct: 6  LNVGAQSVLTAQRQLNTTGHNISNANTEGYSRQSVI-QGVNDPRQYGGQSYGMGVHVENV 64

Query: 65 YLSKEVGSFISTG-TELDFALEGDA 88
            S +  +      +  + A +GD 
Sbjct: 65 RRSWDQFAVKELNLSTTNAANKGDT 89



 Score = 36.8 bits (83), Expect = 2.5,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 13/37 (35%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N   E   M+   Q + + + ++     +    +
Sbjct: 587 SGVNLDEEAANMMKFQQAYMASSRIMQAANDTFNTIL 623


>gi|220924393|ref|YP_002499695.1| flagellar basal body rod protein [Methylobacterium nodulans ORS
          2060]
 gi|219949000|gb|ACL59392.1| flagellar basal body rod protein [Methylobacterium nodulans ORS
          2060]
          Length = 119

 Score = 41.8 bits (96), Expect = 0.084,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 23/70 (32%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
             L  R +TVA N++N DT G+R   V     +        +     A      +    
Sbjct: 14 AQHLSARQATVAGNIANADTPGYRARDVVPFRPIPVCVGPPSRLRFGRAVSPARRATGRP 73

Query: 72 SFISTGTELD 81
          +      E D
Sbjct: 74 AGAGPPWEGD 83


>gi|146311252|ref|YP_001176326.1| flagellar hook-associated protein FlgK [Enterobacter sp. 638]
 gi|145318128|gb|ABP60275.1| flagellar hook-associated protein FlgK [Enterobacter sp. 638]
          Length = 546

 Score = 41.8 bits (96), Expect = 0.084,   Method: Composition-based stats.
 Identities = 9/52 (17%), Positives = 21/52 (40%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+TV++N+S+ +  G+             +    
Sbjct: 1  MSSLINSAMSGLSAAQASLNTVSNNISSYNVAGYTRQTTVLGAANSTLTGGG 52


>gi|228964726|ref|ZP_04125833.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
           sotto str. T04001]
 gi|228794976|gb|EEM42475.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
           sotto str. T04001]
          Length = 152

 Score = 41.8 bits (96), Expect = 0.085,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 29/72 (40%)

Query: 12  QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
              L  + +TV+ N++N +T G++   V F+E +           + + S  +       
Sbjct: 29  MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNEM 88

Query: 72  SFISTGTELDFA 83
              +  T+  +A
Sbjct: 89  HLPTVNTKNTYA 100


>gi|325109010|ref|YP_004270078.1| flagellar basal-body rod protein FlgC [Planctomyces brasiliensis
           DSM 5305]
 gi|324969278|gb|ADY60056.1| flagellar basal-body rod protein FlgC [Planctomyces brasiliensis
           DSM 5305]
          Length = 133

 Score = 41.8 bits (96), Expect = 0.086,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 31/107 (28%), Gaps = 8/107 (7%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G----FRTIKVKFSEVVGAIKNDI 52
           M  + +I  +  +A  QRL+T+A+N++N  T     G    F+   V F+    + +   
Sbjct: 1   MFRTIDIITSGLVAQRQRLNTIAENVANQQTTRDAEGNVSPFQRRFVTFAADSDSTEAAG 60

Query: 53  DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
            +                        E   A                
Sbjct: 61  VKFEVEKDDQTPPRLVYEPGHPDANAEGYVAYPAINMVTEFVNAMEA 107



 Score = 37.2 bits (84), Expect = 1.9,   Method: Composition-based stats.
 Identities = 6/45 (13%), Positives = 17/45 (37%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           G++     N + E    +  ++ + +        +K    A+R +
Sbjct: 88  GYVAYPAINMVTEFVNAMEASRAYEANVVSFSTTQKIGEMALRIL 132


>gi|294635607|ref|ZP_06714084.1| flagellar basal-body rod protein FlgB [Edwardsiella tarda ATCC
          23685]
 gi|291091059|gb|EFE23620.1| flagellar basal-body rod protein FlgB [Edwardsiella tarda ATCC
          23685]
          Length = 137

 Score = 41.8 bits (96), Expect = 0.086,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 23/65 (35%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   +A N++N DT G++   + F+  +  I        S +A          
Sbjct: 15 ALNLRAQRQEILAANIANADTPGYQARDIDFASQLSRILEQGRPDGSSMALSLTSARHIP 74

Query: 71 GSFIS 75
             + 
Sbjct: 75 AQTVQ 79


>gi|116619479|ref|YP_821635.1| flagellar basal-body rod protein FlgC [Candidatus Solibacter
           usitatus Ellin6076]
 gi|116222641|gb|ABJ81350.1| flagellar basal-body rod protein FlgC [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 144

 Score = 41.8 bits (96), Expect = 0.087,   Method: Composition-based stats.
 Identities = 5/42 (11%), Positives = 18/42 (42%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++     N+  +M  ++  ++ F +    +   +  +  +I
Sbjct: 99  GYVAFPKINTAEDMVDLMGASRSFEANVAAMSAVKDMIQRSI 140



 Score = 37.9 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 20/47 (42%), Gaps = 6/47 (12%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43
          +  ++G +   A   R   + +N++N +T     G  +R   V F  
Sbjct: 5  SLLSVGASGMSAQRARAELLVENLANAETTRTPEGGPYRRKDVVFET 51


>gi|315179405|gb|ADT86319.1| flage3llar hook-associated protein FlgK [Vibrio furnissii NCTC
          11218]
          Length = 644

 Score = 41.8 bits (96), Expect = 0.088,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 28/84 (33%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
           N+G  + L  +++L+T   N+SN +T G+    V     +          +        
Sbjct: 6  LNVGAQSVLTAQRQLNTTGHNISNVNTEGYSRQSVIQGTNMPRRYGGETYGMGVHVENVR 65

Query: 65 YLSKEVGSFISTGTELDFALEGDA 88
              +           D++ + D 
Sbjct: 66 RSWDQFAVKELNLATTDYSFKRDN 89



 Score = 37.2 bits (84), Expect = 2.1,   Method: Composition-based stats.
 Identities = 6/37 (16%), Positives = 13/37 (35%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N   E   M+   Q + + + +I     +    +
Sbjct: 605 SGVNLDEEAANMMKFQQAYMASSRIIQAANDTFNTIL 641


>gi|304397201|ref|ZP_07379080.1| flagellar basal-body rod protein FlgB [Pantoea sp. aB]
 gi|304355350|gb|EFM19718.1| flagellar basal-body rod protein FlgB [Pantoea sp. aB]
          Length = 137

 Score = 41.8 bits (96), Expect = 0.088,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 28/78 (35%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
            +   G  A     QR   +A N++N DT G++   + F+  +  + ++   + S +A 
Sbjct: 6  DAALKFGTEALNLRAQRQEILASNIANADTPGYQARDIDFASELSRVMSNGRAEGSSMAL 65

Query: 62 GKEYLSKEVGSFISTGTE 79
                          + 
Sbjct: 66 KVTSARHIEAQTNGAPSM 83


>gi|91785627|ref|YP_560833.1| flagellar hook-associated protein FlgK [Burkholderia xenovorans
          LB400]
 gi|91689581|gb|ABE32781.1| Flagellar hook-associated protein [Burkholderia xenovorans LB400]
          Length = 657

 Score = 41.8 bits (96), Expect = 0.088,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 24/70 (34%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M    N+GL+   A +  L+T   N+SN  T G+      ++E  G              
Sbjct: 1  MSNLINLGLSGLNAAQWGLTTTGQNISNASTPGYTIETPVYAESGGQYTGSGYLPQGVST 60

Query: 61 SGKEYLSKEV 70
          +       + 
Sbjct: 61 TTVTRQYSQY 70



 Score = 35.6 bits (80), Expect = 6.5,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 13/37 (35%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N   E   ++   Q + + + +I   +      +
Sbjct: 617 SGVNINEEAANLLQYQQLYQANSKVIQTAQTLFQTIL 653


>gi|315121850|ref|YP_004062339.1| flagellar basal body rod protein FlgB [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495252|gb|ADR51851.1| flagellar basal body rod protein FlgB [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 183

 Score = 41.8 bits (96), Expect = 0.089,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 23/72 (31%), Gaps = 1/72 (1%)

Query: 15  LEQRLSTVADNMSNTDTVGFR-TIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSF 73
           L +R   V++N++N  T G+R      F  V+           + + +            
Sbjct: 70  LSERQKVVSENIANASTPGYRSKDISAFETVLNDNIAMARTHEAHLKAMDFDGFYRHVRT 129

Query: 74  ISTGTELDFALE 85
           I         ++
Sbjct: 130 IQAPLYQPIGVQ 141


>gi|251799725|ref|YP_003014456.1| flagellar hook-associated protein FlgK [Paenibacillus sp. JDR-2]
 gi|247547351|gb|ACT04370.1| flagellar hook-associated protein FlgK [Paenibacillus sp. JDR-2]
          Length = 518

 Score = 41.8 bits (96), Expect = 0.089,   Method: Composition-based stats.
 Identities = 11/89 (12%), Positives = 28/89 (31%), Gaps = 4/89 (4%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV----VGAIKNDIDQKISFV 59
                 +    +  L+T   N+SN +T G+   +V F+           +         
Sbjct: 7  GLETAKRSIFTTQTALNTTGHNISNANTSGYSRQRVNFTAARPIEAYGYSHSTAAGQLGT 66

Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDA 88
                +++    F+ +    ++   G+ 
Sbjct: 67 GVEASSITRVRDKFLDSQFYSEYKWLGNY 95



 Score = 40.6 bits (93), Expect = 0.18,   Method: Composition-based stats.
 Identities = 5/41 (12%), Positives = 18/41 (43%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  +   EM  ++     +N+   ++   ++++   I ++ 
Sbjct: 474 SGVSLDEEMSDLVKFQHAYNASARVMTVIDETLDRIINSMG 514


>gi|15615024|ref|NP_243327.1| flagellar basal body rod protein FlgB [Bacillus halodurans C-125]
 gi|10175081|dbj|BAB06180.1| flagellar basal-body rod protein [Bacillus halodurans C-125]
          Length = 132

 Score = 41.8 bits (96), Expect = 0.089,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 18/42 (42%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
                 +   ++ N++N DT  ++  KV F +V     ++ 
Sbjct: 15 GLYGASLQQRAISQNIANVDTPNYKAKKVNFQKVFDEALSNT 56


>gi|27381987|ref|NP_773516.1| flagellar basal body rod protein FlgB [Bradyrhizobium japonicum
          USDA 110]
 gi|27355157|dbj|BAC52141.1| flagellar basal-body rod protein [Bradyrhizobium japonicum USDA
          110]
          Length = 133

 Score = 41.8 bits (96), Expect = 0.089,   Method: Composition-based stats.
 Identities = 14/74 (18%), Positives = 30/74 (40%), Gaps = 1/74 (1%)

Query: 8  GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIKNDIDQKISFVASGKEYL 66
            +    LE R ST+A N++N +T GF+   V+ F++V+  +   +              
Sbjct: 17 ASSQARYLELRQSTIATNVANANTPGFKARDVEPFNKVLDGMPVRLATTSPTHMQLSATE 76

Query: 67 SKEVGSFISTGTEL 80
          +    +      ++
Sbjct: 77 TDTRATSKKDSWDV 90


>gi|310659048|ref|YP_003936769.1| flagellar basal-body rod protein [Clostridium sticklandii DSM
          519]
 gi|308825826|emb|CBH21864.1| flagellar basal-body rod protein [Clostridium sticklandii]
          Length = 130

 Score = 41.8 bits (96), Expect = 0.090,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 27/78 (34%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69
           A  A   R  T+  N++N +T  ++   V F E +   KN+            +  S  
Sbjct: 11 TALNAYNLRNETINKNLANVNTPNYKREVVSFEEYLDKSKNNYITGFKTNNKHIDIPSNN 70

Query: 70 VGSFISTGTELDFALEGD 87
               +   ++  +   D
Sbjct: 71 PSVPYTIKRDMSVSTRED 88


>gi|291562018|emb|CBL40832.1| flagellar basal-body rod protein FlgB [butyrate-producing bacterium
           SS3/4]
          Length = 130

 Score = 41.8 bits (96), Expect = 0.090,   Method: Composition-based stats.
 Identities = 12/90 (13%), Positives = 28/90 (31%)

Query: 12  QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
             +L  R +   +N++N DT GF++  + F   +                      + + 
Sbjct: 16  LDSLWMRQNLTMNNIANVDTPGFKSQYMTFENELAQKIRSALTVKKTSMKNVARGIENMR 75

Query: 72  SFISTGTELDFALEGDAWFALESPRGIILT 101
             + T       L+ +     +    +  T
Sbjct: 76  PSVHTTLNESTRLDENNVDMDQEQVELART 105


>gi|242309690|ref|ZP_04808845.1| predicted protein [Helicobacter pullorum MIT 98-5489]
 gi|239523691|gb|EEQ63557.1| predicted protein [Helicobacter pullorum MIT 98-5489]
          Length = 74

 Score = 41.8 bits (96), Expect = 0.090,   Method: Composition-based stats.
 Identities = 9/74 (12%), Positives = 20/74 (27%)

Query: 169 FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228
                 S        +  +      ++   LE SN +        ++      +    I 
Sbjct: 1   MNPISGSTYYGYDAFSNAQSGIDANMRSATLETSNTDITQSTVNTMNAQNGVEANAQTIQ 60

Query: 229 ENEKSMLEAIRNIA 242
             +  M  A+  +A
Sbjct: 61  TADSMMQSALDILA 74


>gi|154252985|ref|YP_001413809.1| flagellar hook-associated protein FlgK [Parvibaculum
          lavamentivorans DS-1]
 gi|154156935|gb|ABS64152.1| flagellar hook-associated protein FlgK [Parvibaculum
          lavamentivorans DS-1]
          Length = 613

 Score = 41.8 bits (96), Expect = 0.090,   Method: Composition-based stats.
 Identities = 4/32 (12%), Positives = 14/32 (43%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGF 34
          ++    ++     +  +   + N++N  T G+
Sbjct: 5  SALGAAMSGLNVTQAGIDVTSRNIANVGTAGY 36



 Score = 36.0 bits (81), Expect = 4.4,   Method: Composition-based stats.
 Identities = 5/36 (13%), Positives = 14/36 (38%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            N   EM  ++ L   +++   +I   ++     + 
Sbjct: 575 VNIDDEMSNLLLLQNAYSANARVITTIKQLFDVLLS 610


>gi|308186390|ref|YP_003930521.1| Flagellar basal-body rod protein flgB [Pantoea vagans C9-1]
 gi|308056900|gb|ADO09072.1| Flagellar basal-body rod protein flgB [Pantoea vagans C9-1]
          Length = 137

 Score = 41.8 bits (96), Expect = 0.091,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 28/78 (35%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
            +   G  A     QR   +A N++N DT G++   + F+  +  + ++   + S +A 
Sbjct: 6  DAALKFGTEALNLRAQRQEILASNIANADTPGYQARDIDFASELSRVMSNGRAEGSSMAL 65

Query: 62 GKEYLSKEVGSFISTGTE 79
                          + 
Sbjct: 66 KVTSARHIEAQTNGAPSM 83


>gi|260767921|ref|ZP_05876855.1| flagellar basal-body rod protein FlgC [Vibrio furnissii CIP 102972]
 gi|260615951|gb|EEX41136.1| flagellar basal-body rod protein FlgC [Vibrio furnissii CIP 102972]
 gi|315179624|gb|ADT86538.1| flagellar basal-body rod protein FlgC [Vibrio furnissii NCTC 11218]
          Length = 144

 Score = 41.8 bits (96), Expect = 0.091,   Method: Composition-based stats.
 Identities = 6/42 (14%), Positives = 18/42 (42%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   + + + EM  M+  T+ F +   ++   +      +
Sbjct: 97  GYVYYPDIDVVAEMADMMSATRSFETNVEVLSNVKSMQQGLL 138



 Score = 37.5 bits (85), Expect = 1.6,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 6/65 (9%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          I  +A  A   RL+TVA N++N D V       +R +K  F+ V    +      +   A
Sbjct: 9  IAGSAMTAQTVRLNTVASNLANADAVSANPDDAYRALKPVFATVYNKSQLATGDNVYPSA 68

Query: 61 SGKEY 65
            +  
Sbjct: 69 EVRIV 73


>gi|254993553|ref|ZP_05275743.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
          FSL J2-064]
          Length = 506

 Score = 41.8 bits (96), Expect = 0.091,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 18/42 (42%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46
          FN  L+   A +        N+SN +T G+    V  + V G
Sbjct: 6  FNTSLSGMSAAQIANMVAQQNISNMNTPGYIRQAVDQTAVYG 47



 Score = 38.7 bits (88), Expect = 0.63,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 14/41 (34%), Gaps = 2/41 (4%)

Query: 198 FLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            LE    N   EM  ++     + + T  ++     M   +
Sbjct: 465 SLEG--VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALL 503


>gi|238755327|ref|ZP_04616670.1| Flagellar basal-body rod protein flgB [Yersinia ruckeri ATCC
          29473]
 gi|238706463|gb|EEP98837.1| Flagellar basal-body rod protein flgB [Yersinia ruckeri ATCC
          29473]
 gi|253317692|gb|ACT22781.1| flagellar basal body protein FlgB [Yersinia ruckeri]
          Length = 137

 Score = 41.8 bits (96), Expect = 0.091,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 23/65 (35%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   ++ N++N DT GF+   + FS  +  +        S ++          
Sbjct: 15 ALNLRAQRQEILSANIANADTPGFQARDIDFSSQLQKVMEQGRVNGSGMSLSLTAARHIP 74

Query: 71 GSFIS 75
             I 
Sbjct: 75 AQNIQ 79


>gi|148976400|ref|ZP_01813106.1| flagellar hook-associated protein K [Vibrionales bacterium
          SWAT-3]
 gi|145964223|gb|EDK29479.1| flagellar hook-associated protein K [Vibrionales bacterium
          SWAT-3]
          Length = 626

 Score = 41.8 bits (96), Expect = 0.091,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 32/85 (37%), Gaps = 2/85 (2%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
           N+G  + L  +++L+T   N+SN +T G+    V    V    +         V     
Sbjct: 6  LNVGAQSVLTAQRQLNTTGHNISNANTEGYSRQSVI-QGVNDPRQYGGQTYGMGVHVENV 64

Query: 65 YLSKEVGSFISTG-TELDFALEGDA 88
            S +  +      +  + A +GD 
Sbjct: 65 RRSWDQFAVNELNLSTTNAANKGDT 89



 Score = 36.4 bits (82), Expect = 3.4,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 13/37 (35%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N   E   M+   Q + + + ++     +    +
Sbjct: 587 SGVNLDEEAANMMKFQQAYMASSRIMQAANDTFNTIL 623


>gi|84514835|ref|ZP_01002198.1| flagellar basal-body rod protein FlgC [Loktanella vestfoldensis
           SKA53]
 gi|84510994|gb|EAQ07448.1| flagellar basal-body rod protein FlgC [Loktanella vestfoldensis
           SKA53]
          Length = 139

 Score = 41.8 bits (96), Expect = 0.091,   Method: Composition-based stats.
 Identities = 6/42 (14%), Positives = 18/42 (42%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           GF+     +   E+  M+  ++++ +   ++      ML  +
Sbjct: 93  GFVYMPPVDMNEELVDMLEASRQYQNNLEVLTTMRTLMLRTV 134



 Score = 39.1 bits (89), Expect = 0.53,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 29/85 (34%), Gaps = 6/85 (7%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDT-VG-----FRTIKVKFSEVVGAIKNDIDQKI 56
            F+I   +  A   RL+TVA N++N +T  G     FR ++  F         + ++  
Sbjct: 6  NVFDIAGRSMAAQMVRLNTVASNIANANTRSGSAEQTFRPLRPVFQTAFEGGIRNAERAT 65

Query: 57 SFVASGKEYLSKEVGSFISTGTELD 81
            V        +            D
Sbjct: 66 VDVKEIVALDREAQRVHEPGHPLAD 90


>gi|126441479|ref|YP_001057319.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei
           668]
 gi|126220972|gb|ABN84478.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
           668]
          Length = 163

 Score = 41.8 bits (96), Expect = 0.091,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 27/93 (29%), Gaps = 1/93 (1%)

Query: 11  AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
           A      R   ++ N++N DT G+R   V FS  +           +  A+         
Sbjct: 15  ALDVRAYRQELLSSNIANADTPGYRARDVDFSSTLARALKQDGAASAGNAAQLPLAQPAG 74

Query: 71  GSFISTGTELDFA-LEGDAWFALESPRGIILTR 102
            +   +      A L G+              R
Sbjct: 75  VASGMSMATTSGAHLAGNVKLIPTGGPSDDYGR 107


>gi|47095271|ref|ZP_00232882.1| flagellar hook-associated protein 1-related protein [Listeria
          monocytogenes str. 1/2a F6854]
 gi|254900059|ref|ZP_05259983.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
          J0161]
 gi|254911388|ref|ZP_05261400.1| conserved hypothetical protein [Listeria monocytogenes J2818]
 gi|254935715|ref|ZP_05267412.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
          F6900]
 gi|47016342|gb|EAL07264.1| flagellar hook-associated protein 1-related protein [Listeria
          monocytogenes str. 1/2a F6854]
 gi|258608298|gb|EEW20906.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
          F6900]
 gi|293589325|gb|EFF97659.1| conserved hypothetical protein [Listeria monocytogenes J2818]
          Length = 506

 Score = 41.8 bits (96), Expect = 0.091,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 18/42 (42%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46
          FN  L+   A +        N+SN +T G+    V  + V G
Sbjct: 6  FNTSLSGMSAAQIANMVAQQNISNMNTPGYIRQAVDQTAVYG 47



 Score = 38.7 bits (88), Expect = 0.64,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 14/41 (34%), Gaps = 2/41 (4%)

Query: 198 FLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            LE    N   EM  ++     + + T  ++     M   +
Sbjct: 465 SLEG--VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALL 503


>gi|296102911|ref|YP_003613057.1| flagellar basal body rod protein FlgB [Enterobacter cloacae
          subsp. cloacae ATCC 13047]
 gi|295057370|gb|ADF62108.1| flagellar basal body rod protein FlgB [Enterobacter cloacae
          subsp. cloacae ATCC 13047]
          Length = 139

 Score = 41.8 bits (96), Expect = 0.092,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 25/66 (37%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   +A N++N DT G++   + FS  +  +      + S VA          
Sbjct: 15 ALNLRAQRQEILAANIANADTPGYQARDIDFSSELKKVMERGRAEGSGVALALTSSRHIP 74

Query: 71 GSFIST 76
             ++ 
Sbjct: 75 AQAMTA 80


>gi|241766736|ref|ZP_04764570.1| flagellar basal body rod protein [Acidovorax delafieldii 2AN]
 gi|241362905|gb|EER58629.1| flagellar basal body rod protein [Acidovorax delafieldii 2AN]
          Length = 101

 Score = 41.8 bits (96), Expect = 0.093,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 16/33 (48%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
             A + RL   A+N++N +T G+R   V    
Sbjct: 11 GLQAAQLRLDASANNVANMNTSGYRREAVAQQA 43


>gi|53724562|ref|YP_104795.1| flagellar basal body rod protein FlgB [Burkholderia mallei ATCC
          23344]
 gi|67641535|ref|ZP_00440312.1| flagellar basal-body rod protein FlgB [Burkholderia mallei GB8
          horse 4]
 gi|121600142|ref|YP_994288.1| flagellar basal body rod protein FlgB [Burkholderia mallei SAVP1]
 gi|124384637|ref|YP_001028063.1| flagellar basal body rod protein FlgB [Burkholderia mallei NCTC
          10229]
 gi|126450078|ref|YP_001082870.1| flagellar basal body rod protein FlgB [Burkholderia mallei NCTC
          10247]
 gi|126451866|ref|YP_001064561.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei
          1106a]
 gi|167001533|ref|ZP_02267328.1| flagellar basal-body rod protein FlgB [Burkholderia mallei
          PRL-20]
 gi|167813798|ref|ZP_02445478.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei
          91]
 gi|167822315|ref|ZP_02453786.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei
          9]
 gi|167892407|ref|ZP_02479809.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei
          7894]
 gi|167900905|ref|ZP_02488110.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei
          NCTC 13177]
 gi|167917161|ref|ZP_02504252.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei
          BCC215]
 gi|217424904|ref|ZP_03456400.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
          576]
 gi|226199738|ref|ZP_03795289.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
          Pakistan 9]
 gi|242317296|ref|ZP_04816312.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
          1106b]
 gi|254174732|ref|ZP_04881393.1| flagellar basal-body rod protein FlgB [Burkholderia mallei ATCC
          10399]
 gi|254182143|ref|ZP_04888740.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
          1655]
 gi|254188073|ref|ZP_04894585.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
          Pasteur 52237]
 gi|254196553|ref|ZP_04902977.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
          S13]
 gi|254201893|ref|ZP_04908257.1| flagellar basal-body rod protein FlgB [Burkholderia mallei FMH]
 gi|254207227|ref|ZP_04913578.1| flagellar basal-body rod protein FlgB [Burkholderia mallei JHU]
 gi|254359729|ref|ZP_04976000.1| flagellar basal-body rod protein FlgB [Burkholderia mallei
          2002721280]
 gi|52427985|gb|AAU48578.1| flagellar basal-body rod protein FlgB [Burkholderia mallei ATCC
          23344]
 gi|121228952|gb|ABM51470.1| flagellar basal-body rod protein FlgB [Burkholderia mallei SAVP1]
 gi|124292657|gb|ABN01926.1| flagellar basal-body rod protein FlgB [Burkholderia mallei NCTC
          10229]
 gi|126225508|gb|ABN89048.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
          1106a]
 gi|126242948|gb|ABO06041.1| flagellar basal-body rod protein FlgB [Burkholderia mallei NCTC
          10247]
 gi|147747787|gb|EDK54863.1| flagellar basal-body rod protein FlgB [Burkholderia mallei FMH]
 gi|147752769|gb|EDK59835.1| flagellar basal-body rod protein FlgB [Burkholderia mallei JHU]
 gi|148028943|gb|EDK86875.1| flagellar basal-body rod protein FlgB [Burkholderia mallei
          2002721280]
 gi|157935753|gb|EDO91423.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
          Pasteur 52237]
 gi|160695777|gb|EDP85747.1| flagellar basal-body rod protein FlgB [Burkholderia mallei ATCC
          10399]
 gi|169653296|gb|EDS85989.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
          S13]
 gi|184212681|gb|EDU09724.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
          1655]
 gi|217391924|gb|EEC31950.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
          576]
 gi|225928089|gb|EEH24125.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
          Pakistan 9]
 gi|238522486|gb|EEP85930.1| flagellar basal-body rod protein FlgB [Burkholderia mallei GB8
          horse 4]
 gi|242140535|gb|EES26937.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei
          1106b]
 gi|243062735|gb|EES44921.1| flagellar basal-body rod protein FlgB [Burkholderia mallei
          PRL-20]
          Length = 163

 Score = 41.8 bits (96), Expect = 0.093,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 20/52 (38%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
          A      R   ++ N++N DT G+R   V FS  +           +  A+ 
Sbjct: 15 ALDVRAYRQELLSSNIANADTPGYRARDVDFSSTLARALKQDGAASAGNAAQ 66


>gi|330811238|ref|YP_004355700.1| flagellar basal-body rod protein [Pseudomonas brassicacearum
          subsp. brassicacearum NFM421]
 gi|327379346|gb|AEA70696.1| Putative flagellar basal-body rod protein [Pseudomonas
          brassicacearum subsp. brassicacearum NFM421]
          Length = 135

 Score = 41.8 bits (96), Expect = 0.094,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 27/80 (33%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
            +  I   A     QR   +A+N++N DT  ++   + FS+V+             +  
Sbjct: 6  DKALGIHEQALSFRAQRAEVLANNIANADTPNYKARDLDFSKVLAEQNEKTKNGHFALNM 65

Query: 62 GKEYLSKEVGSFISTGTELD 81
                +  G      + + 
Sbjct: 66 TNSRHIEAEGLGNGDESLMY 85


>gi|209966304|ref|YP_002299219.1| flagellar basal-body rod protein FlgC [Rhodospirillum centenum SW]
 gi|209959770|gb|ACJ00407.1| flagellar basal-body rod protein FlgC [Rhodospirillum centenum SW]
          Length = 146

 Score = 41.8 bits (96), Expect = 0.094,   Method: Composition-based stats.
 Identities = 11/93 (11%), Positives = 26/93 (27%), Gaps = 2/93 (2%)

Query: 149 SQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKR--GFLEDSNANS 206
           + +     + G  +V    G      +      P    E           G +   N + 
Sbjct: 51  TPRPYAPVSSGQTAVTGPDGQGMGTRAVFRATQPAFVPEFSPDSPFADADGMVAAPNVDL 110

Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           + E   M      + +   + +  ++   EA+ 
Sbjct: 111 VGETVAMTQGLDAYKANLRVFEAADELTREALN 143



 Score = 39.1 bits (89), Expect = 0.55,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 16/33 (48%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG 33
          M     I  +   A  +RL+  ADN++N  + G
Sbjct: 1  MVDPIAIAGSGMTAQARRLAAGADNIANARSTG 33


>gi|160897165|ref|YP_001562747.1| flagellar basal-body rod protein FlgB [Delftia acidovorans SPH-1]
 gi|160362749|gb|ABX34362.1| flagellar basal-body rod protein FlgB [Delftia acidovorans SPH-1]
          Length = 129

 Score = 41.8 bits (96), Expect = 0.094,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 23/69 (33%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QRL+ +A N++N DT G++   + F E +      +    S           + 
Sbjct: 10 ALKIRTQRLAIIASNIANADTPGYQAKDLDFKEALERSNATMLSVSSTSKGHIPSSEMKS 69

Query: 71 GSFISTGTE 79
                   
Sbjct: 70 IYDTQVAFR 78


>gi|321315384|ref|YP_004207671.1| flagellar basal body rod protein FlgB [Bacillus subtilis BSn5]
 gi|320021658|gb|ADV96644.1| flagellar basal body rod protein FlgB [Bacillus subtilis BSn5]
          Length = 129

 Score = 41.8 bits (96), Expect = 0.095,   Method: Composition-based stats.
 Identities = 8/45 (17%), Positives = 21/45 (46%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54
           A    + +   + +N++N DT  ++  KV F  ++    + ++ 
Sbjct: 13 NALSRADIKQKVITNNIANIDTPNYKAKKVSFQNLLDQESSRLET 57


>gi|209695756|ref|YP_002263686.1| flagellar hook-associated protein FlgK [Aliivibrio salmonicida
           LFI1238]
 gi|208009709|emb|CAQ80013.1| flagellar hook-associated protein type 3 FlgM [Aliivibrio
           salmonicida LFI1238]
          Length = 626

 Score = 41.8 bits (96), Expect = 0.095,   Method: Composition-based stats.
 Identities = 15/95 (15%), Positives = 39/95 (41%), Gaps = 2/95 (2%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA--IKNDIDQKISFVASG 62
            N+G    L  +++L+T + N++N +T GF    V     +       ++   +   A  
Sbjct: 6   LNLGTQGVLTAQRQLNTTSHNINNVNTEGFSRQSVVQETNMPHWVSGANLGAGVHVAAVR 65

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALESPRG 97
           + +          + T L+++++ +A   + +   
Sbjct: 66  RSFDQFATNELNLSTTNLNYSMDTEANLDVLTNMM 100



 Score = 38.3 bits (87), Expect = 0.83,   Method: Composition-based stats.
 Identities = 5/38 (13%), Positives = 16/38 (42%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           S  N   E   M+   Q + + + ++   +++    ++
Sbjct: 587 SGVNLDEEAANMMKFQQAYMASSRIMKAADETFNTILQ 624


>gi|322378745|ref|ZP_08053174.1| flagellar hook-associated protein FlgK [Helicobacter suis HS1]
 gi|321148775|gb|EFX43246.1| flagellar hook-associated protein FlgK [Helicobacter suis HS1]
          Length = 606

 Score = 41.8 bits (96), Expect = 0.095,   Method: Composition-based stats.
 Identities = 8/80 (10%), Positives = 26/80 (32%), Gaps = 2/80 (2%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKF--SEVVGAIKNDIDQKISFV 59
           +S N       A +  +    +N+SN +   +   +V       +     +++  ++  
Sbjct: 5  LSSLNTSYTGLQAHQVMVDVTGNNISNANDPFYSRQRVIATPQSTLMYTNRNMNMGVNVQ 64

Query: 60 ASGKEYLSKEVGSFISTGTE 79
          +  + +       +     E
Sbjct: 65 SIQRVHDDFVFARYTRANQE 84



 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 6/37 (16%), Positives = 15/37 (40%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  +S  EM  +I     + +   +I   ++ +   +
Sbjct: 566 SGVSSDEEMVNLIKFQSGYAANAKVITAIDRMIETLL 602


>gi|322380594|ref|ZP_08054746.1| flagellar hook-associated protein FlgK [Helicobacter suis HS5]
 gi|321146916|gb|EFX41664.1| flagellar hook-associated protein FlgK [Helicobacter suis HS5]
          Length = 606

 Score = 41.8 bits (96), Expect = 0.095,   Method: Composition-based stats.
 Identities = 8/80 (10%), Positives = 26/80 (32%), Gaps = 2/80 (2%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKF--SEVVGAIKNDIDQKISFV 59
           +S N       A +  +    +N+SN +   +   +V       +     +++  ++  
Sbjct: 5  LSSLNTSYTGLQAHQVMVDVTGNNISNANDPFYSRQRVIATPQSTLMYTNRNMNMGVNVQ 64

Query: 60 ASGKEYLSKEVGSFISTGTE 79
          +  + +       +     E
Sbjct: 65 SIQRVHDDFVFARYTRANQE 84



 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 6/37 (16%), Positives = 15/37 (40%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  +S  EM  +I     + +   +I   ++ +   +
Sbjct: 566 SGVSSDEEMVNLIKFQSGYAANAKVITAIDRMIETLL 602


>gi|157146229|ref|YP_001453548.1| flagellar basal body rod protein FlgB [Citrobacter koseri ATCC
          BAA-895]
 gi|157083434|gb|ABV13112.1| hypothetical protein CKO_01986 [Citrobacter koseri ATCC BAA-895]
          Length = 138

 Score = 41.8 bits (96), Expect = 0.095,   Method: Composition-based stats.
 Identities = 11/66 (16%), Positives = 26/66 (39%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   +A N++N DT G++   + F+  +  +     ++   +A          
Sbjct: 15 ALNLRAQRQEVLAANIANADTPGYQARDMDFASELKKVMVRGREETGGIALKLTSAQHIP 74

Query: 71 GSFIST 76
             +++
Sbjct: 75 AQTVAS 80


>gi|54307267|ref|YP_128287.1| flagellar basal body rod protein FlgB [Photobacterium profundum
          SS9]
 gi|46911687|emb|CAG18485.1| Hypothetical FlgB putative flagellar basal-body rod protein
          [Photobacterium profundum SS9]
          Length = 139

 Score = 41.8 bits (96), Expect = 0.095,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 18/36 (50%)

Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          QR   +A N++N DT  ++   + F + +  I  + 
Sbjct: 35 QRAKVLASNLANVDTPNYKARDISFEDAMSQIAGEA 70


>gi|300954378|ref|ZP_07166832.1| flagellar hook-associated protein FlgK [Escherichia coli MS
          175-1]
 gi|301029703|ref|ZP_07192757.1| flagellar hook-associated protein FlgK [Escherichia coli MS
          196-1]
 gi|299877391|gb|EFI85602.1| flagellar hook-associated protein FlgK [Escherichia coli MS
          196-1]
 gi|300318614|gb|EFJ68398.1| flagellar hook-associated protein FlgK [Escherichia coli MS
          175-1]
 gi|323942551|gb|EGB38718.1| flagellar hook protein FlgK [Escherichia coli E482]
          Length = 547

 Score = 41.8 bits (96), Expect = 0.096,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 21/52 (40%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+        +    +    
Sbjct: 1  MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMEQANSTLGAGG 52


>gi|224498787|ref|ZP_03667136.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
          Finland 1988]
 gi|254829362|ref|ZP_05234049.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
          FSL N3-165]
 gi|254830304|ref|ZP_05234959.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
          10403S]
 gi|284801035|ref|YP_003412900.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
          08-5578]
 gi|284994177|ref|YP_003415945.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
          08-5923]
 gi|258601775|gb|EEW15100.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
          FSL N3-165]
 gi|284056597|gb|ADB67538.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
          08-5578]
 gi|284059644|gb|ADB70583.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
          08-5923]
          Length = 506

 Score = 41.8 bits (96), Expect = 0.096,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 18/42 (42%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46
          FN  L+   A +        N+SN +T G+    V  + V G
Sbjct: 6  FNTSLSGMSAAQIANMVAQQNISNMNTPGYIRQAVDQTAVYG 47



 Score = 38.7 bits (88), Expect = 0.66,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 14/41 (34%), Gaps = 2/41 (4%)

Query: 198 FLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            LE    N   EM  ++     + + T  ++     M   +
Sbjct: 465 SLEG--VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALL 503


>gi|16802747|ref|NP_464232.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
          EGD-e]
 gi|224501990|ref|ZP_03670297.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
          FSL R2-561]
 gi|16410094|emb|CAC98783.1| lmo0705 [Listeria monocytogenes EGD-e]
          Length = 506

 Score = 41.8 bits (96), Expect = 0.096,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 18/42 (42%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46
          FN  L+   A +        N+SN +T G+    V  + V G
Sbjct: 6  FNTSLSGMSAAQIANMVAQQNISNMNTPGYIRQAVDQTAVYG 47



 Score = 38.7 bits (88), Expect = 0.66,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 14/41 (34%), Gaps = 2/41 (4%)

Query: 198 FLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            LE    N   EM  ++     + + T  ++     M   +
Sbjct: 465 SLEG--VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALL 503


>gi|254932015|ref|ZP_05265374.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
          HPB2262]
 gi|293583567|gb|EFF95599.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
          HPB2262]
 gi|328475667|gb|EGF46416.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
          220]
          Length = 506

 Score = 41.4 bits (95), Expect = 0.097,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 18/42 (42%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46
          FN  L+   A +        N+SN +T G+    V  + V G
Sbjct: 6  FNTSLSGMSAAQIANMVAQQNISNMNTPGYIRQAVDQTAVYG 47



 Score = 37.9 bits (86), Expect = 1.2,   Method: Composition-based stats.
 Identities = 5/35 (14%), Positives = 12/35 (34%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            N   EM  ++     + + T  ++     M   +
Sbjct: 469 VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALL 503


>gi|83719578|ref|YP_440798.1| flagellar basal body rod protein FlgB [Burkholderia thailandensis
           E264]
 gi|167617582|ref|ZP_02386213.1| flagellar basal body rod protein FlgB [Burkholderia thailandensis
           Bt4]
 gi|257140551|ref|ZP_05588813.1| flagellar basal body rod protein FlgB [Burkholderia thailandensis
           E264]
 gi|83653403|gb|ABC37466.1| flagellar basal-body rod protein FlgB [Burkholderia thailandensis
           E264]
          Length = 163

 Score = 41.4 bits (95), Expect = 0.097,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 27/93 (29%), Gaps = 1/93 (1%)

Query: 11  AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
           A      R   ++ N++N DT G+R   V FS  +           +  A+         
Sbjct: 15  ALDVRAYRQELLSSNIANADTPGYRARDVDFSSTLARALKQDGAASAGNAAALPLAQPAG 74

Query: 71  GSFISTGTELDFA-LEGDAWFALESPRGIILTR 102
            +   +      A L G+              R
Sbjct: 75  VTSGMSMATTSGAHLAGNVKLTPTGGPSDDYGR 107


>gi|183179571|ref|ZP_02957782.1| flagellar hook-associated protein FlgK [Vibrio cholerae MZO-3]
 gi|183012982|gb|EDT88282.1| flagellar hook-associated protein FlgK [Vibrio cholerae MZO-3]
          Length = 624

 Score = 41.4 bits (95), Expect = 0.098,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 27/84 (32%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
           N+G  + L  +++L+T   N+SN +T G+    V                +        
Sbjct: 6  LNVGTQSVLTAQRQLNTTGHNISNVNTEGYSRQSVIQGTNAPRQYGGETYGMGVHVENVR 65

Query: 65 YLSKEVGSFISTGTELDFALEGDA 88
              +           D+A + D 
Sbjct: 66 RSWDQFAVKELNIASTDYAFKRDT 89



 Score = 37.2 bits (84), Expect = 2.1,   Method: Composition-based stats.
 Identities = 6/37 (16%), Positives = 14/37 (37%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N   E   M+   Q + + + +I  +  +    +
Sbjct: 585 SGVNLDEEAANMMKFQQAYMASSRIIQASNDTFNTIL 621


>gi|78485806|ref|YP_391731.1| hypothetical protein Tcr_1465 [Thiomicrospira crunogena XCL-2]
 gi|78364092|gb|ABB42057.1| Flagellar hook-associated protein FlgK [Thiomicrospira crunogena
          XCL-2]
          Length = 630

 Score = 41.4 bits (95), Expect = 0.098,   Method: Composition-based stats.
 Identities = 13/76 (17%), Positives = 28/76 (36%), Gaps = 3/76 (3%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M    NIG AA     + +   + N++N  T G+   +    ++  +  ++         
Sbjct: 1  MADMLNIGTAATNTFRRAIEVTSHNVANVGTEGYSRQRA---DITSSSASNAGYGFLGAG 57

Query: 61 SGKEYLSKEVGSFIST 76
          S    + +    +I T
Sbjct: 58 SRVSSIDRVYADYIQT 73


>gi|254227981|ref|ZP_04921411.1| flagellar basal-body rod protein FlgC [Vibrio sp. Ex25]
 gi|151939477|gb|EDN58305.1| flagellar basal-body rod protein FlgC [Vibrio sp. Ex25]
          Length = 144

 Score = 41.4 bits (95), Expect = 0.098,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 19/43 (44%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   + + + EM  M+  T+ F +   ++   +      +R
Sbjct: 97  GYVYYPDIDVVAEMADMMSATRSFETNVEVLSNVKSMQQGLLR 139



 Score = 35.6 bits (80), Expect = 6.8,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 6/46 (13%)

Query: 10 AAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIK 49
          +A  A   RL+TVA N++N D V       ++ +K  F+ V    +
Sbjct: 12 SAMTAQTVRLNTVASNLANADAVSANPDDAYKALKPVFATVYQKAQ 57


>gi|206895357|ref|YP_002246680.1| flagellar basal-body rod protein FlgB [Coprothermobacter
          proteolyticus DSM 5265]
 gi|206737974|gb|ACI17052.1| flagellar basal-body rod protein FlgB [Coprothermobacter
          proteolyticus DSM 5265]
          Length = 113

 Score = 41.4 bits (95), Expect = 0.099,   Method: Composition-based stats.
 Identities = 12/36 (33%), Positives = 19/36 (52%)

Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          Q L  V  N++N DT G++  +V F  V   ++N  
Sbjct: 15 QNLQAVQSNLANVDTPGYKRQEVDFQTVFMELQNHG 50


>gi|254251198|ref|ZP_04944516.1| Flagellar hook-associated protein [Burkholderia dolosa AUO158]
 gi|124893807|gb|EAY67687.1| Flagellar hook-associated protein [Burkholderia dolosa AUO158]
          Length = 655

 Score = 41.4 bits (95), Expect = 0.099,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 28/80 (35%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           T  N+G++   A    L+T   N+SN  T G+   +  F+E  G   +           
Sbjct: 3  NTLMNLGVSGLNAALWGLTTTGQNISNAATPGYSVERPVFAEASGQYTSSGYLPQGVNTV 62

Query: 62 GKEYLSKEVGSFISTGTELD 81
            +    +  S    G +  
Sbjct: 63 TVQRQYSQYLSDQLNGAQSQ 82



 Score = 36.4 bits (82), Expect = 3.1,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 11/37 (29%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N   E   ++   Q + +   +I          +
Sbjct: 615 SGVNQNEEAANLMQYQQYYQANAKVIQTAATLFQTVL 651


>gi|2443633|gb|AAC33158.1| hook associated protein [Vibrio cholerae]
          Length = 624

 Score = 41.4 bits (95), Expect = 0.099,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 27/84 (32%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
           N+G  + L  +++L+T   N+SN +T G+    V                +        
Sbjct: 6  LNVGTQSVLTAQRQLNTTGHNISNVNTEGYSRQSVIQGTNAPRQYGGETYGMGVHVENVR 65

Query: 65 YLSKEVGSFISTGTELDFALEGDA 88
              +           D+A + D 
Sbjct: 66 RSWDQFAVKELNIASTDYAFKRDT 89



 Score = 37.2 bits (84), Expect = 2.1,   Method: Composition-based stats.
 Identities = 6/37 (16%), Positives = 14/37 (37%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N   E   M+   Q + + + +I  +  +    +
Sbjct: 585 SGVNLDEEAANMMKFQQAYMASSRIIQASNDTFNTIL 621


>gi|89072317|ref|ZP_01158896.1| flagellar basal body rod protein [Photobacterium sp. SKA34]
 gi|89051849|gb|EAR57301.1| flagellar basal body rod protein [Photobacterium sp. SKA34]
          Length = 144

 Score = 41.4 bits (95), Expect = 0.099,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 19/43 (44%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   + + + EM  M+  T+ F +   ++   +      +R
Sbjct: 97  GYVYYPDIDVVAEMADMMSATRSFETNVEVLSNVKSMQQGLLR 139



 Score = 37.9 bits (86), Expect = 1.2,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 29/71 (40%), Gaps = 6/71 (8%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          I  +A  A   RL+TVA N++N D V       ++ +K  F+ V    +   +Q     A
Sbjct: 9  IAGSAMNAQTIRLNTVASNLANADAVAANPDDAYKALKPVFATVYNKTQLTGEQADYPSA 68

Query: 61 SGKEYLSKEVG 71
            +     +  
Sbjct: 69 EVRIMDVVQHA 79


>gi|15642190|ref|NP_231822.1| flagellar hook-associated protein FlgK [Vibrio cholerae O1 biovar
          El Tor str. N16961]
 gi|121726550|ref|ZP_01679799.1| flagellar hook-associated protein FlgK [Vibrio cholerae V52]
 gi|147675062|ref|YP_001217708.1| flagellar hook-associated protein FlgK [Vibrio cholerae O395]
 gi|153817114|ref|ZP_01969781.1| flagellar hook-associated protein FlgK [Vibrio cholerae NCTC
          8457]
 gi|153820887|ref|ZP_01973554.1| flagellar hook-associated protein FlgK [Vibrio cholerae B33]
 gi|227082315|ref|YP_002810866.1| flagellar hook-associated protein FlgM [Vibrio cholerae M66-2]
 gi|229507732|ref|ZP_04397237.1| flagellar hook-associated protein FlgK [Vibrio cholerae BX
          330286]
 gi|229512073|ref|ZP_04401552.1| flagellar hook-associated protein FlgK [Vibrio cholerae B33]
 gi|229519209|ref|ZP_04408652.1| flagellar hook-associated protein FlgK [Vibrio cholerae RC9]
 gi|229607236|ref|YP_002877884.1| flagellar hook-associated protein FlgK [Vibrio cholerae MJ-1236]
 gi|254849320|ref|ZP_05238670.1| flagellar hook-associated protein FlgK [Vibrio cholerae MO10]
 gi|255747110|ref|ZP_05421055.1| flagellar hook-associated protein FlgK [Vibrio cholera CIRS 101]
 gi|262167783|ref|ZP_06035485.1| flagellar hook-associated protein FlgK [Vibrio cholerae RC27]
 gi|298500431|ref|ZP_07010236.1| flagellar hook-associated protein FlgK [Vibrio cholerae MAK 757]
 gi|9656746|gb|AAF95336.1| flagellar hook-associated protein FlgM [Vibrio cholerae O1 biovar
          El Tor str. N16961]
 gi|121631003|gb|EAX63382.1| flagellar hook-associated protein FlgK [Vibrio cholerae V52]
 gi|126512382|gb|EAZ74976.1| flagellar hook-associated protein FlgK [Vibrio cholerae NCTC
          8457]
 gi|126521679|gb|EAZ78902.1| flagellar hook-associated protein FlgK [Vibrio cholerae B33]
 gi|146316945|gb|ABQ21484.1| flagellar hook-associated protein FlgK [Vibrio cholerae O395]
 gi|227010203|gb|ACP06415.1| flagellar hook-associated protein FlgM [Vibrio cholerae M66-2]
 gi|227014087|gb|ACP10297.1| flagellar hook-associated protein FlgM [Vibrio cholerae O395]
 gi|229343898|gb|EEO08873.1| flagellar hook-associated protein FlgK [Vibrio cholerae RC9]
 gi|229352038|gb|EEO16979.1| flagellar hook-associated protein FlgK [Vibrio cholerae B33]
 gi|229355237|gb|EEO20158.1| flagellar hook-associated protein FlgK [Vibrio cholerae BX
          330286]
 gi|229369891|gb|ACQ60314.1| flagellar hook-associated protein FlgK [Vibrio cholerae MJ-1236]
 gi|254845025|gb|EET23439.1| flagellar hook-associated protein FlgK [Vibrio cholerae MO10]
 gi|255735512|gb|EET90912.1| flagellar hook-associated protein FlgK [Vibrio cholera CIRS 101]
 gi|262023848|gb|EEY42547.1| flagellar hook-associated protein FlgK [Vibrio cholerae RC27]
 gi|297541124|gb|EFH77178.1| flagellar hook-associated protein FlgK [Vibrio cholerae MAK 757]
          Length = 624

 Score = 41.4 bits (95), Expect = 0.099,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 27/84 (32%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
           N+G  + L  +++L+T   N+SN +T G+    V                +        
Sbjct: 6  LNVGTQSVLTAQRQLNTTGHNISNVNTEGYSRQSVIQGTNAPRQYGGETYGMGVHVENVR 65

Query: 65 YLSKEVGSFISTGTELDFALEGDA 88
              +           D+A + D 
Sbjct: 66 RSWDQFAVKELNIASTDYAFKRDT 89



 Score = 37.2 bits (84), Expect = 2.1,   Method: Composition-based stats.
 Identities = 6/37 (16%), Positives = 14/37 (37%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N   E   M+   Q + + + +I  +  +    +
Sbjct: 585 SGVNLDEEAANMMKFQQAYMASSRIIQASNDTFNTIL 621


>gi|42524766|ref|NP_970146.1| flagellar basal-body rod protein FlgB [Bdellovibrio bacteriovorus
          HD100]
 gi|39576976|emb|CAE78205.1| flagellar basal-body rod protein FlgB [Bdellovibrio bacteriovorus
          HD100]
          Length = 136

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 9/80 (11%), Positives = 27/80 (33%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
            + N    +    + R +  + N++N +T G+   K+ F   +    +         ++
Sbjct: 6  DKTTNALATSLSMRQLRHNVTSSNIANAETPGYHAKKMDFEGALQRALDLDGANSLSTSN 65

Query: 62 GKEYLSKEVGSFISTGTELD 81
           + +    +    +     D
Sbjct: 66 PEHFAVGGISVSKTRPDIYD 85


>gi|86146149|ref|ZP_01064475.1| flagellar hook-associated protein [Vibrio sp. MED222]
 gi|85836096|gb|EAQ54228.1| flagellar hook-associated protein [Vibrio sp. MED222]
          Length = 626

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 14/76 (18%), Positives = 26/76 (34%), Gaps = 1/76 (1%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
           N+G  + L  +++L+T   N+SN +T G+    V    V    +         V     
Sbjct: 6  LNVGAQSVLTAQRQLNTTGHNISNANTEGYSRQSVV-QGVNDPRQYGGQTYGMGVHVENV 64

Query: 65 YLSKEVGSFISTGTEL 80
            S +  +        
Sbjct: 65 RRSWDQFAVKELNLST 80



 Score = 36.8 bits (83), Expect = 3.0,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 13/37 (35%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N   E   M+   Q + + + ++     +    +
Sbjct: 587 SGVNLDEEAANMMKFQQAYMASSRIMQAANDTFNTIL 623


>gi|229522140|ref|ZP_04411557.1| flagellar hook-associated protein FlgK [Vibrio cholerae TM
          11079-80]
 gi|229341065|gb|EEO06070.1| flagellar hook-associated protein FlgK [Vibrio cholerae TM
          11079-80]
          Length = 624

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 27/84 (32%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
           N+G  + L  +++L+T   N+SN +T G+    V                +        
Sbjct: 6  LNVGTQSVLTAQRQLNTTGHNISNVNTEGYSRQSVIQGTNAPRQYGGETYGMGVHVENVR 65

Query: 65 YLSKEVGSFISTGTELDFALEGDA 88
              +           D+A + D 
Sbjct: 66 RSWDQFAVKELNIASTDYAFKRDT 89



 Score = 37.2 bits (84), Expect = 2.1,   Method: Composition-based stats.
 Identities = 6/37 (16%), Positives = 14/37 (37%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N   E   M+   Q + + + +I  +  +    +
Sbjct: 585 SGVNLDEEAANMMKFQQAYMASSRIIQASNDTFNTIL 621


>gi|153213645|ref|ZP_01948918.1| flagellar hook-associated protein FlgK [Vibrio cholerae 1587]
 gi|153825351|ref|ZP_01978018.1| flagellar hook-associated protein FlgK [Vibrio cholerae MZO-2]
 gi|153829350|ref|ZP_01982017.1| flagellar hook-associated protein FlgK [Vibrio cholerae 623-39]
 gi|229524186|ref|ZP_04413591.1| flagellar hook-associated protein FlgK [Vibrio cholerae bv.
          albensis VL426]
 gi|229528804|ref|ZP_04418194.1| flagellar hook-associated protein FlgK [Vibrio cholerae 12129(1)]
 gi|262191683|ref|ZP_06049859.1| flagellar hook-associated protein FlgK [Vibrio cholerae CT
          5369-93]
 gi|124115844|gb|EAY34664.1| flagellar hook-associated protein FlgK [Vibrio cholerae 1587]
 gi|148875191|gb|EDL73326.1| flagellar hook-associated protein FlgK [Vibrio cholerae 623-39]
 gi|149741035|gb|EDM55104.1| flagellar hook-associated protein FlgK [Vibrio cholerae MZO-2]
 gi|229332578|gb|EEN98064.1| flagellar hook-associated protein FlgK [Vibrio cholerae 12129(1)]
 gi|229337767|gb|EEO02784.1| flagellar hook-associated protein FlgK [Vibrio cholerae bv.
          albensis VL426]
 gi|262032422|gb|EEY50984.1| flagellar hook-associated protein FlgK [Vibrio cholerae CT
          5369-93]
 gi|327484710|gb|AEA79117.1| Flagellar hook-associated protein FlgK [Vibrio cholerae
          LMA3894-4]
          Length = 624

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 27/84 (32%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
           N+G  + L  +++L+T   N+SN +T G+    V                +        
Sbjct: 6  LNVGTQSVLTAQRQLNTTGHNISNVNTEGYSRQSVIQGTNAPRQYGGETYGMGVHVENVR 65

Query: 65 YLSKEVGSFISTGTELDFALEGDA 88
              +           D+A + D 
Sbjct: 66 RSWDQFAVKELNIASTDYAFKRDT 89



 Score = 37.2 bits (84), Expect = 2.1,   Method: Composition-based stats.
 Identities = 6/37 (16%), Positives = 14/37 (37%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N   E   M+   Q + + + +I  +  +    +
Sbjct: 585 SGVNLDEEAANMMKFQQAYMASSRIIQASNDTFNTIL 621


>gi|262161346|ref|ZP_06030456.1| flagellar hook-associated protein FlgK [Vibrio cholerae INDRE
          91/1]
 gi|262028657|gb|EEY47311.1| flagellar hook-associated protein FlgK [Vibrio cholerae INDRE
          91/1]
          Length = 624

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 27/84 (32%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
           N+G  + L  +++L+T   N+SN +T G+    V                +        
Sbjct: 6  LNVGTQSVLTAQRQLNTTGHNISNVNTEGYSRQSVIQGTNAPRQYGGETYGMGVHVENVR 65

Query: 65 YLSKEVGSFISTGTELDFALEGDA 88
              +           D+A + D 
Sbjct: 66 RSWDQFAVKELNIASTDYAFKRDT 89



 Score = 37.2 bits (84), Expect = 2.1,   Method: Composition-based stats.
 Identities = 6/37 (16%), Positives = 14/37 (37%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N   E   M+   Q + + + +I  +  +    +
Sbjct: 585 SGVNLDEEAANMMKFQQAYMASSRIIQASNDTFNTIL 621


>gi|229513835|ref|ZP_04403297.1| flagellar hook-associated protein FlgK [Vibrio cholerae TMA 21]
 gi|229349016|gb|EEO13973.1| flagellar hook-associated protein FlgK [Vibrio cholerae TMA 21]
          Length = 624

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 27/84 (32%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
           N+G  + L  +++L+T   N+SN +T G+    V                +        
Sbjct: 6  LNVGTQSVLTAQRQLNTTGHNISNVNTEGYSRQSVIQGTNAPRQYGGETYGMGVHVENVR 65

Query: 65 YLSKEVGSFISTGTELDFALEGDA 88
              +           D+A + D 
Sbjct: 66 RSWDQFAVKELNIASTDYAFKRDT 89



 Score = 37.2 bits (84), Expect = 2.2,   Method: Composition-based stats.
 Identities = 6/37 (16%), Positives = 14/37 (37%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N   E   M+   Q + + + +I  +  +    +
Sbjct: 585 SGVNLDEEAANMMKFQQAYMASSRIIQASNDTFNTIL 621


>gi|225375213|ref|ZP_03752434.1| hypothetical protein ROSEINA2194_00838 [Roseburia inulinivorans
          DSM 16841]
 gi|225212880|gb|EEG95234.1| hypothetical protein ROSEINA2194_00838 [Roseburia inulinivorans
          DSM 16841]
          Length = 610

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 17/40 (42%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
             I  +   A +  L+T A+N+SN  T G+       S 
Sbjct: 7  GLTIASSGLSAYQAALNTTANNISNEQTKGYSRQAANLSA 46


>gi|190574266|ref|YP_001972111.1| flagellar basal body rod protein FlgB [Stenotrophomonas
          maltophilia K279a]
 gi|254523965|ref|ZP_05136020.1| flagellar basal-body rod protein FlgB [Stenotrophomonas sp.
          SKA14]
 gi|190012188|emb|CAQ45811.1| putative flagellar basal-body rod protein FlgB [Stenotrophomonas
          maltophilia K279a]
 gi|219721556|gb|EED40081.1| flagellar basal-body rod protein FlgB [Stenotrophomonas sp.
          SKA14]
          Length = 131

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 22/55 (40%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65
          A    EQR+  +A N+ N DT G++   + F   +   +      +      + Y
Sbjct: 15 AMPLREQRMKLIASNLGNADTPGYKAQDLDFDAALRHAQGQDANGLMATTHEQHY 69


>gi|121586274|ref|ZP_01676064.1| flagellar hook-associated protein FlgK [Vibrio cholerae 2740-80]
 gi|121549540|gb|EAX59566.1| flagellar hook-associated protein FlgK [Vibrio cholerae 2740-80]
          Length = 624

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 27/84 (32%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
           N+G  + L  +++L+T   N+SN +T G+    V                +        
Sbjct: 6  LNVGTQSVLTAQRQLNTTGHNISNVNTEGYSRQSVIQGTNAPRQYGGETYGMGVHVENVR 65

Query: 65 YLSKEVGSFISTGTELDFALEGDA 88
              +           D+A + D 
Sbjct: 66 RSWDQFAVKELNIASTDYAFKRDT 89



 Score = 37.2 bits (84), Expect = 2.2,   Method: Composition-based stats.
 Identities = 6/37 (16%), Positives = 14/37 (37%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N   E   M+   Q + + + +I  +  +    +
Sbjct: 585 SGVNLDEEAANMMKFQQAYMASSRIIQASNDTFNTIL 621


>gi|186477694|ref|YP_001859164.1| flagellar basal body rod protein FlgB [Burkholderia phymatum
          STM815]
 gi|184194153|gb|ACC72118.1| flagellar basal-body rod protein FlgB [Burkholderia phymatum
          STM815]
          Length = 163

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 8/69 (11%), Positives = 24/69 (34%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A      R   ++ N++N+DT G++   + F+  +           +  ++  +    + 
Sbjct: 15 ALDVRAYRQELLSSNIANSDTPGYKARDIDFASSLAGALKKSGGSTAGASNNSQLAMTQP 74

Query: 71 GSFISTGTE 79
                 + 
Sbjct: 75 AGVSQGMSM 83


>gi|90422997|ref|YP_531367.1| flagellar hook-associated protein [Rhodopseudomonas palustris
          BisB18]
 gi|90105011|gb|ABD87048.1| Flagellar hook-associated protein [Rhodopseudomonas palustris
          BisB18]
          Length = 626

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 13/92 (14%), Positives = 33/92 (35%), Gaps = 3/92 (3%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
          + +I +A   A +  ++ V+ N++N +T G+    V   + V      +   ++     +
Sbjct: 6  ALSIAMAGLRANQAAMTLVSSNVANAETPGYIRKSV---DQVTTNTGSMGSGVNINGVNR 62

Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESP 95
          E  S       +  +   +A     +      
Sbjct: 63 ELDSFVQTQLRTETSGAGYASLKSDFLQQLQG 94



 Score = 37.9 bits (86), Expect = 1.2,   Method: Composition-based stats.
 Identities = 5/38 (13%), Positives = 15/38 (39%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           S  N   EM  ++ L   +++   ++    +     ++
Sbjct: 587 SGVNMDEEMAHLLSLQNAYSANARVMSTVNQMYQTLMQ 624


>gi|292900255|ref|YP_003539624.1| flagellar basal-body rod protein [Erwinia amylovora ATCC 49946]
 gi|291200103|emb|CBJ47229.1| flagellar basal-body rod protein [Erwinia amylovora ATCC 49946]
          Length = 135

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 24/68 (35%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A   L +R   +A N++N DT G+    + FS+ +     +     S V+          
Sbjct: 15 ALSLLSRRQEVLASNIANADTPGYLARDIDFSQQLKNTLANQSMAKSPVSLSLTAEKHIE 74

Query: 71 GSFISTGT 78
          G       
Sbjct: 75 GKGRPFDD 82


>gi|260772280|ref|ZP_05881196.1| flagellar hook-associated protein FlgK [Vibrio metschnikovii CIP
          69.14]
 gi|260611419|gb|EEX36622.1| flagellar hook-associated protein FlgK [Vibrio metschnikovii CIP
          69.14]
          Length = 641

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 12/76 (15%), Positives = 25/76 (32%), Gaps = 1/76 (1%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
           N+G  + L  +++L+T   N++N +T G+    V         +         V     
Sbjct: 6  LNLGAQSVLTAQRQLNTTGHNIANVNTEGYSRQSVI-QGTNAPRQLGGQTYGMGVHVENV 64

Query: 65 YLSKEVGSFISTGTEL 80
            S +  +        
Sbjct: 65 RRSWDQFAVKELNLAT 80



 Score = 36.4 bits (82), Expect = 3.3,   Method: Composition-based stats.
 Identities = 19/200 (9%), Positives = 48/200 (24%), Gaps = 19/200 (9%)

Query: 40  KFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
           +F   +       D ++      K         ++    +    +   A      P    
Sbjct: 459 EFEAYLVPNTGAGDHEMQIRVVDKNGQLLATQPYLFNDDQSKLPIVIPAQQTSGQPTVFT 518

Query: 100 LTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG 159
           LTR        +    +A+      D  ++   I  +        +  I      + T  
Sbjct: 519 LTRGAI-----ENDKFTANLNPAEGDNGNLRKMIHLQTTKKMNDNESTIIGLYHNLNTDF 573

Query: 160 LYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              +  S                     +      + G +  S  N   E   M+     
Sbjct: 574 GLKLSTSTRL------------ADVARLEKEAAESRIGSV--SGVNLDEEAANMMKFQHA 619

Query: 220 FNSITTLIDENEKSMLEAIR 239
           + + + ++     +    ++
Sbjct: 620 YMASSRIMQAANDTFNTILQ 639


>gi|257095362|ref|YP_003169003.1| flagellar basal-body rod protein FlgB [Candidatus Accumulibacter
          phosphatis clade IIA str. UW-1]
 gi|257047886|gb|ACV37074.1| flagellar basal-body rod protein FlgB [Candidatus Accumulibacter
          phosphatis clade IIA str. UW-1]
          Length = 136

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 22/58 (37%), Gaps = 4/58 (6%)

Query: 1  MQTSFNIGLA----AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54
          M +  +  L+    A      R   +A N++N DT  +R     F+  +    +   Q
Sbjct: 1  MVSMLDSALSFQQQALTLRAHRQQVLAANIANADTPNYRARDFDFAAALQNAVSGRSQ 58


>gi|226223336|ref|YP_002757443.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
          Clip81459]
 gi|254824015|ref|ZP_05229016.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
          FSL J1-194]
 gi|225875798|emb|CAS04501.1| Putative flagellar hook-associated protein FlgK [Listeria
          monocytogenes serotype 4b str. CLIP 80459]
 gi|293593243|gb|EFG01004.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
          FSL J1-194]
          Length = 506

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 18/42 (42%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46
          FN  L+   A +        N+SN +T G+    V  + V G
Sbjct: 6  FNTSLSGMSAAQIANMVAQQNISNMNTPGYIRQAVDQTAVYG 47



 Score = 37.9 bits (86), Expect = 1.2,   Method: Composition-based stats.
 Identities = 5/35 (14%), Positives = 12/35 (34%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            N   EM  ++     + + T  ++     M   +
Sbjct: 469 VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALL 503


>gi|218708810|ref|YP_002416431.1| flagellar hook-associated protein FlgK [Vibrio splendidus LGP32]
 gi|218321829|emb|CAV17801.1| flagellar hook-associated protein FlgK [Vibrio splendidus LGP32]
          Length = 626

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 14/76 (18%), Positives = 26/76 (34%), Gaps = 1/76 (1%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
           N+G  + L  +++L+T   N+SN +T G+    V    V    +         V     
Sbjct: 6  LNVGAQSVLTAQRQLNTTGHNISNANTEGYSRQSVV-QGVNDPRQYGGQTYGMGVHVENV 64

Query: 65 YLSKEVGSFISTGTEL 80
            S +  +        
Sbjct: 65 RRSWDQFAVKELNLST 80



 Score = 36.8 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 13/37 (35%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N   E   M+   Q + + + ++     +    +
Sbjct: 587 SGVNLDEEAANMMKFQQAYMASSRIMQAANDTFNTIL 623


>gi|170751912|ref|YP_001758172.1| flagellar hook-associated protein FlgK [Methylobacterium
           radiotolerans JCM 2831]
 gi|170658434|gb|ACB27489.1| flagellar hook-associated protein FlgK [Methylobacterium
           radiotolerans JCM 2831]
          Length = 627

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 31/98 (31%)

Query: 142 VGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLED 201
                  S  G V A      +  +Q  V  + +  S        +  +  T +  F   
Sbjct: 529 PQTFSSSSGIGGVSAPYSTSVIGFAQDIVSTQGANASNASALDATQQTALSTAQSRFSAG 588

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +  N   EM  +I L   + +   ++      + + ++
Sbjct: 589 AGVNIDQEMSNLIALQTAYGANARVLTAARDMLTQLLQ 626


>gi|254853091|ref|ZP_05242439.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
          FSL R2-503]
 gi|300764517|ref|ZP_07074510.1| flagellar hook-associated protein 1-related protein [Listeria
          monocytogenes FSL N1-017]
 gi|258606440|gb|EEW19048.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
          FSL R2-503]
 gi|300514871|gb|EFK41925.1| flagellar hook-associated protein 1-related protein [Listeria
          monocytogenes FSL N1-017]
          Length = 506

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 18/42 (42%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46
          FN  L+   A +        N+SN +T G+    V  + V G
Sbjct: 6  FNTSLSGMSAAQIANMVAQQNISNMNTPGYIRQAVDQTAVYG 47



 Score = 37.9 bits (86), Expect = 1.2,   Method: Composition-based stats.
 Identities = 5/35 (14%), Positives = 12/35 (34%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            N   EM  ++     + + T  ++     M   +
Sbjct: 469 VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALL 503


>gi|46906956|ref|YP_013345.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
          serotype 4b str. F2365]
 gi|46880222|gb|AAT03522.1| flagellar hook-associated protein 1-related protein [Listeria
          monocytogenes serotype 4b str. F2365]
          Length = 506

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 18/42 (42%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46
          FN  L+   A +        N+SN +T G+    V  + V G
Sbjct: 6  FNTSLSGMSAAQIANMVAQQNISNMNTPGYIRQAVDQTAVYG 47



 Score = 37.9 bits (86), Expect = 1.2,   Method: Composition-based stats.
 Identities = 5/35 (14%), Positives = 12/35 (34%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            N   EM  ++     + + T  ++     M   +
Sbjct: 469 VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALL 503


>gi|37679153|ref|NP_933762.1| flagellar hook-associated protein FlgK [Vibrio vulnificus YJ016]
 gi|320157103|ref|YP_004189482.1| flagellar hook-associated protein FlgK [Vibrio vulnificus
          MO6-24/O]
 gi|37197895|dbj|BAC93733.1| flagellar hook-associated protein FlgK [Vibrio vulnificus YJ016]
 gi|319932415|gb|ADV87279.1| flagellar hook-associated protein FlgK [Vibrio vulnificus
          MO6-24/O]
          Length = 638

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 30/83 (36%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
           N+G  + L  +++L+T   N+SN +T G+    V  +             +        
Sbjct: 6  LNVGTQSVLTAQRQLNTTGHNISNVNTEGYSRQSVIQATNDPRQFGGSTYGMGVHVENVR 65

Query: 65 YLSKEVGSFISTGTELDFALEGD 87
              +        +  +FA +GD
Sbjct: 66 RSWDQFAVNELNLSTTNFANKGD 88



 Score = 37.2 bits (84), Expect = 2.0,   Method: Composition-based stats.
 Identities = 5/38 (13%), Positives = 14/38 (36%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           S  N   E   M+   Q + + + ++     +    ++
Sbjct: 599 SGVNLDEEAANMMRFQQAYMASSRIMQAANDTFNTILQ 636


>gi|261339373|ref|ZP_05967231.1| flagellar basal-body rod protein FlgB [Enterobacter cancerogenus
          ATCC 35316]
 gi|288318174|gb|EFC57112.1| flagellar basal-body rod protein FlgB [Enterobacter cancerogenus
          ATCC 35316]
          Length = 138

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 25/66 (37%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   +A N++N DT G++   + FS  +  +      + + VA          
Sbjct: 15 ALNLRAQRQEILAANIANADTPGYQARDIDFSSELKKVMERGRAEGTGVALAMTSSRHIP 74

Query: 71 GSFIST 76
             ++ 
Sbjct: 75 AQAMTA 80


>gi|217965197|ref|YP_002350875.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
          HCC23]
 gi|217334467|gb|ACK40261.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
          HCC23]
 gi|307570244|emb|CAR83423.1| flagellar hook-associated protein 1-related protein [Listeria
          monocytogenes L99]
          Length = 506

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 18/42 (42%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46
          FN  L+   A +        N+SN +T G+    V  + V G
Sbjct: 6  FNTSLSGMSAAQIANMVAQQNISNMNTPGYIRQAVDQTAVYG 47



 Score = 37.9 bits (86), Expect = 1.3,   Method: Composition-based stats.
 Identities = 5/35 (14%), Positives = 12/35 (34%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            N   EM  ++     + + T  ++     M   +
Sbjct: 469 VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALL 503


>gi|163789664|ref|ZP_02184102.1| flagellar hook-associated protein K [Carnobacterium sp. AT7]
 gi|159875196|gb|EDP69262.1| flagellar hook-associated protein K [Carnobacterium sp. AT7]
          Length = 98

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 20/56 (35%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           N      L  +  L T + N+SN +T G+   KV            I Q  + V 
Sbjct: 8  LNNATKGLLVQQSALQTTSHNISNANTEGYSRQKVTMVADNPYTLGGIGQLGTGVR 63


>gi|323139652|ref|ZP_08074694.1| flagellar basal-body rod protein FlgC [Methylocystis sp. ATCC
           49242]
 gi|322395084|gb|EFX97643.1| flagellar basal-body rod protein FlgC [Methylocystis sp. ATCC
           49242]
          Length = 139

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 14/96 (14%), Positives = 30/96 (31%)

Query: 143 GEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDS 202
              G      K I+             VR    G+ P       +  +      G ++  
Sbjct: 38  NTPGADPYVRKTISFANELDRASGVRLVRVNQIGVDPTPFTIEHDPGNPAADANGDVKRP 97

Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           N N + EMG M    + + +   ++ ++   +   +
Sbjct: 98  NVNLLVEMGDMREANRAYEADLQVMKQSRDLIAMTV 133



 Score = 36.8 bits (83), Expect = 2.7,   Method: Composition-based stats.
 Identities = 15/106 (14%), Positives = 29/106 (27%), Gaps = 8/106 (7%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNT----DTVG---FRTIKVKFS-EVVGAIKNDID 53
             S  +  A   A   RL  V++NM+N     +T G   +    + F+ E+  A    + 
Sbjct: 6   DASLKVAGAGLAAQSARLRIVSENMANAQSTGNTPGADPYVRKTISFANELDRASGVRLV 65

Query: 54  QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
           +          +  +      +     D                  
Sbjct: 66  RVNQIGVDPTPFTIEHDPGNPAADANGDVKRPNVNLLVEMGDMREA 111


>gi|295096219|emb|CBK85309.1| flagellar hook-associated protein FlgK [Enterobacter cloacae
          subsp. cloacae NCTC 9394]
          Length = 546

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 9/52 (17%), Positives = 21/52 (40%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+TV++N+S+ +  G+             +    
Sbjct: 1  MSSLINSAMSGLSAAQSALNTVSNNISSYNVAGYTRQTTILGASNSTLTGGG 52


>gi|313624689|gb|EFR94646.1| flagellar hook-associated protein FlgK [Listeria innocua FSL
          J1-023]
          Length = 506

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 18/42 (42%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46
          FN  L+   A +        N+SN +T G+    V  + V G
Sbjct: 6  FNTSLSGMSAAQIANMVAQQNISNMNTPGYIRQAVDQTAVYG 47



 Score = 37.9 bits (86), Expect = 1.3,   Method: Composition-based stats.
 Identities = 5/35 (14%), Positives = 12/35 (34%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            N   EM  ++     + + T  ++     M   +
Sbjct: 469 VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALL 503


>gi|313620048|gb|EFR91563.1| flagellar hook-associated protein FlgK [Listeria innocua FSL
          S4-378]
          Length = 506

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 18/42 (42%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46
          FN  L+   A +        N+SN +T G+    V  + V G
Sbjct: 6  FNTSLSGMSAAQIANMVAQQNISNMNTPGYIRQAVDQTAVYG 47



 Score = 37.9 bits (86), Expect = 1.3,   Method: Composition-based stats.
 Identities = 5/35 (14%), Positives = 12/35 (34%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            N   EM  ++     + + T  ++     M   +
Sbjct: 469 VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALL 503


>gi|163783192|ref|ZP_02178186.1| flagellar hook associated protein FlgK [Hydrogenivirga sp.
           128-5-R1-1]
 gi|159881526|gb|EDP75036.1| flagellar hook associated protein FlgK [Hydrogenivirga sp.
           128-5-R1-1]
          Length = 528

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 2/40 (5%), Positives = 18/40 (45%)

Query: 200 EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           E  + +   E  +++ + + + ++  ++   ++ +   + 
Sbjct: 488 EMQSVSIDREFMEIMKVKRTYEAVAKVVTTIDELLQTTLN 527


>gi|149191151|ref|ZP_01869409.1| flagellar basal-body rod protein C [Vibrio shilonii AK1]
 gi|148834989|gb|EDL51968.1| flagellar basal-body rod protein C [Vibrio shilonii AK1]
          Length = 142

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 17/41 (41%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
           G++  S  N + EM  MI  T+ F +   ++   +      
Sbjct: 96  GYVYYSGINVVNEMADMISATRSFEASVEVLGNVKSMQQSL 136



 Score = 39.1 bits (89), Expect = 0.55,   Method: Composition-based stats.
 Identities = 15/96 (15%), Positives = 30/96 (31%), Gaps = 7/96 (7%)

Query: 4   SFN-IGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56
                  +A  A   RL+T++ N++N D+V       ++ +K  FS V         Q  
Sbjct: 5   GIYETAGSAMSAQTVRLNTISSNLANADSVSGDPSKVYKPLKPIFSAVYNHFNAQETQHQ 64

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL 92
             V      + +            +     + +   
Sbjct: 65  GVVPIRIADVVEVSSMMEGRYEPNNPLSNDEGYVYY 100


>gi|16799788|ref|NP_470056.1| flagellar hook-associated protein FlgK [Listeria innocua
          Clip11262]
 gi|16413165|emb|CAC95945.1| lin0713 [Listeria innocua Clip11262]
          Length = 506

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 18/42 (42%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46
          FN  L+   A +        N+SN +T G+    V  + V G
Sbjct: 6  FNTSLSGMSAAQIANMVAQQNISNMNTPGYIRQAVDQTAVYG 47



 Score = 37.9 bits (86), Expect = 1.3,   Method: Composition-based stats.
 Identities = 5/35 (14%), Positives = 12/35 (34%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            N   EM  ++     + + T  ++     M   +
Sbjct: 469 VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALL 503


>gi|297580837|ref|ZP_06942762.1| flagellar hook-associated protein FlgK [Vibrio cholerae RC385]
 gi|297534663|gb|EFH73499.1| flagellar hook-associated protein FlgK [Vibrio cholerae RC385]
          Length = 624

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 27/84 (32%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
           N+G  + L  +++L+T   N+SN +T G+    V                +        
Sbjct: 6  LNVGTQSVLTAQRQLNTTGHNISNVNTEGYSRQSVIQGTNAPRQYGGETYGMGVHVENVR 65

Query: 65 YLSKEVGSFISTGTELDFALEGDA 88
              +           D+A + D 
Sbjct: 66 RSWDQFAVKELNIASTDYAFKRDT 89



 Score = 37.2 bits (84), Expect = 2.2,   Method: Composition-based stats.
 Identities = 6/37 (16%), Positives = 14/37 (37%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N   E   M+   Q + + + +I  +  +    +
Sbjct: 585 SGVNLDEEAANMMKFQQAYMASSRIIQASNDTFNTIL 621


>gi|254225807|ref|ZP_04919412.1| flagellar hook-associated protein FlgK [Vibrio cholerae V51]
 gi|125621713|gb|EAZ50042.1| flagellar hook-associated protein FlgK [Vibrio cholerae V51]
          Length = 624

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 27/84 (32%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
           N+G  + L  +++L+T   N+SN +T G+    V                +        
Sbjct: 6  LNVGTQSVLTAQRQLNTTGHNISNVNTEGYSRQSVIQGTNAPRQYGGETYGMGVHVENVR 65

Query: 65 YLSKEVGSFISTGTELDFALEGDA 88
              +           DFA + D 
Sbjct: 66 RSWDQFAVKELNIASTDFAFKRDT 89



 Score = 37.2 bits (84), Expect = 2.1,   Method: Composition-based stats.
 Identities = 6/37 (16%), Positives = 14/37 (37%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N   E   M+   Q + + + +I  +  +    +
Sbjct: 585 SGVNLDEEAANMMKFQQAYMASSRIIQASNDTFNTIL 621


>gi|229058377|ref|ZP_04196761.1| Flagellar basal-body rod protein [Bacillus cereus AH603]
 gi|228719886|gb|EEL71476.1| Flagellar basal-body rod protein [Bacillus cereus AH603]
          Length = 161

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 20/34 (58%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV 45
             L  + +TV+ N++N +T G++   V F+E +
Sbjct: 38 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEKM 71


>gi|23092321|gb|AAN08646.1| FlgK [Aeromonas hydrophila]
          Length = 664

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 8/35 (22%), Positives = 19/35 (54%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39
            IG +  +A ++ L T ++N+ N ++ G+   + 
Sbjct: 6  LGIGTSGVMAQQRLLQTTSNNIVNVNSQGYVRERT 40


>gi|319764536|ref|YP_004128473.1| flagellar basal-body rod protein flgb [Alicycliphilus
          denitrificans BC]
 gi|330826752|ref|YP_004390055.1| flagellar basal-body rod protein FlgB [Alicycliphilus
          denitrificans K601]
 gi|317119097|gb|ADV01586.1| flagellar basal-body rod protein FlgB [Alicycliphilus
          denitrificans BC]
 gi|329312124|gb|AEB86539.1| flagellar basal-body rod protein FlgB [Alicycliphilus
          denitrificans K601]
          Length = 138

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 24/62 (38%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69
           A L   +R   +A N++N DT G+     +F++ + A +           S  +     
Sbjct: 14 NALLLRSERQRAIASNIANADTPGYVARDFQFADALRAAEGARAPGGMRQQSVSDPRHIP 73

Query: 70 VG 71
          + 
Sbjct: 74 LP 75


>gi|148554191|ref|YP_001261773.1| flagellar basal-body rod protein FlgC [Sphingomonas wittichii RW1]
 gi|148499381|gb|ABQ67635.1| flagellar basal-body rod protein FlgC [Sphingomonas wittichii RW1]
          Length = 134

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 4/36 (11%), Positives = 18/36 (50%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +   E+ +M+   +++ +  +++   +   L+ +R
Sbjct: 96  VDQAQELVEMMETARQYQNNVSVMQTAKTLTLDTLR 131



 Score = 37.2 bits (84), Expect = 2.0,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 38/125 (30%), Gaps = 9/125 (7%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFS---EVVGAIKNDI 52
            + F+I   A  A   RL+T A N++N  +V       FR IK  FS   +  G     +
Sbjct: 5   LSVFDIAGRAMSAQMVRLNTSASNLANAGSVAGSKAEAFRAIKPVFSSVTDAPGVATVKV 64

Query: 53  DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDG 112
           DQ ++      +            G   +  ++                 +     T   
Sbjct: 65  DQVVASNIEPTKRYDPNHPKADKDGNVWEAGVDQAQELVEMMETARQYQNNVSVMQTAKT 124

Query: 113 SLVSA 117
             +  
Sbjct: 125 LTLDT 129


>gi|121607564|ref|YP_995371.1| flagellar basal-body rod protein FlgB [Verminephrobacter eiseniae
          EF01-2]
 gi|121552204|gb|ABM56353.1| flagellar basal-body rod protein FlgB [Verminephrobacter eiseniae
          EF01-2]
          Length = 141

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 21/41 (51%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50
          AA +   QR  T+A N++N DT G+     KF + +  +  
Sbjct: 14 AALVLRAQRQRTIASNIANADTPGYAARDFKFGDALREVAG 54


>gi|315281368|ref|ZP_07870006.1| flagellar hook-associated protein FlgK [Listeria marthii FSL
          S4-120]
 gi|313614985|gb|EFR88491.1| flagellar hook-associated protein FlgK [Listeria marthii FSL
          S4-120]
          Length = 506

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 18/42 (42%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46
          FN  L+   A +        N+SN +T G+    V  + V G
Sbjct: 6  FNTSLSGMSAAQIANMVAQQNISNMNTPGYIRQAVDQTAVYG 47



 Score = 37.9 bits (86), Expect = 1.3,   Method: Composition-based stats.
 Identities = 5/35 (14%), Positives = 12/35 (34%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            N   EM  ++     + + T  ++     M   +
Sbjct: 469 VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALL 503


>gi|104782836|ref|YP_609334.1| flagellar hook-associated protein FlgK [Pseudomonas entomophila
          L48]
 gi|95111823|emb|CAK16547.1| flagellar hook-associated protein FlgK [Pseudomonas entomophila
          L48]
          Length = 681

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 9/52 (17%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  NIG++   A +  + T+ +N++N D   +   ++            +
Sbjct: 1  MASLINIGMSGLGAAQSGMYTLGNNIANADVESYSRQQIVQKTKGSQQVGQV 52


>gi|330501143|ref|YP_004378012.1| flagellar hook-associated protein FlgK [Pseudomonas mendocina
           NK-01]
 gi|328915429|gb|AEB56260.1| flagellar hook-associated protein FlgK [Pseudomonas mendocina
           NK-01]
          Length = 455

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 4/38 (10%), Positives = 13/38 (34%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           S  +   E   ++   Q + +   +I    +   + + 
Sbjct: 416 SAVSLDEEAVNLMTYQQAYQANMKVISTANQLFDDMLS 453



 Score = 41.4 bits (95), Expect = 0.12,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 28/84 (33%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66
          I  +   A +  L+T   N++N  T GF  ++     + G     +   +  ++  +   
Sbjct: 7  IAYSGVRASQVALATTGQNIANVKTPGFSRLQTITGSLAGQGGLSVGGGVEVISIRRMTN 66

Query: 67 SKEVGSFISTGTELDFALEGDAWF 90
                     TE +F      + 
Sbjct: 67 EFHNQQLWRATTEQNFYSASQQYL 90


>gi|239628960|ref|ZP_04671991.1| flagellar hook-protein FlgK [Clostridiales bacterium 1_7_47_FAA]
 gi|239519106|gb|EEQ58972.1| flagellar hook-protein FlgK [Clostridiales bacterium 1_7_47FAA]
          Length = 489

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 6/37 (16%), Positives = 16/37 (43%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
                   +  ++ +  V +N+SN +T G+   ++ 
Sbjct: 7  GLETAKRGIMVNQKAIDIVGNNISNVNTKGYTRQRLD 43



 Score = 39.9 bits (91), Expect = 0.35,   Method: Composition-based stats.
 Identities = 5/41 (12%), Positives = 16/41 (39%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  +   E   M+   + + ++  L+   ++ +   I  + 
Sbjct: 445 SGVSLNEEGINMMTYNKAYQALGRLMTTMDEQLDMIINKMG 485


>gi|30248319|ref|NP_840389.1| flagella basal body rod protein [Nitrosomonas europaea ATCC
          19718]
 gi|30138205|emb|CAD84213.1| Flagella basal body rod protein [Nitrosomonas europaea ATCC
          19718]
          Length = 137

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 12/78 (15%), Positives = 28/78 (35%), Gaps = 2/78 (2%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
             A   R   ++ N++N DT GF+     F++ +  +++    + S +A+         
Sbjct: 17 GLRA--TRQELLSGNIANADTPGFKARDFDFAKAMQNVQSPQRVQHSSLATTAPGHIGMA 74

Query: 71 GSFISTGTELDFALEGDA 88
               T     + +    
Sbjct: 75 DFRSITSVPKQYRVPQQP 92


>gi|226944498|ref|YP_002799571.1| flagellar hook-associated protein [Azotobacter vinelandii DJ]
 gi|226719425|gb|ACO78596.1| flagellar hook-associated protein [Azotobacter vinelandii DJ]
          Length = 541

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 21/36 (58%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTI 37
           + F+IG++   A +  LST ++N++N  T G+   
Sbjct: 1  MSIFSIGVSGLNAAQVALSTTSNNITNVYTDGYNRQ 36


>gi|308094613|ref|ZP_05890642.2| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus
          AN-5034]
 gi|308090130|gb|EFO39825.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus
          AN-5034]
          Length = 172

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 6/38 (15%), Positives = 19/38 (50%)

Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
          E+    ++ N++  +T G++   + F++ + A  +   
Sbjct: 61 ERNAEVISTNIAQANTPGYKARGLDFAKELQAATSGAS 98


>gi|229166584|ref|ZP_04294336.1| Flagellar basal-body rod protein [Bacillus cereus AH621]
 gi|228616838|gb|EEK73911.1| Flagellar basal-body rod protein [Bacillus cereus AH621]
          Length = 161

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 20/34 (58%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV 45
             L  + +TV+ N++N +T G++   V F+E +
Sbjct: 38 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQM 71


>gi|88704308|ref|ZP_01102022.1| flagellar basal body rod protein FlgC [Congregibacter litoralis
           KT71]
 gi|88701359|gb|EAQ98464.1| flagellar basal body rod protein FlgC [Congregibacter litoralis
           KT71]
          Length = 140

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 9/96 (9%), Positives = 33/96 (34%), Gaps = 7/96 (7%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKIS 57
           + ++   +  A   RL+T++ N++N + V       +R     F  ++  + +  +   +
Sbjct: 6   AISVAATSLDAQSTRLNTISSNLANANAVSSSAEETYRAQYPVFETMLNELSS-ANGMDA 64

Query: 58  FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE 93
                   +++     +          + + +    
Sbjct: 65  VAGVRVSGITQSDLPAVKEYVPTHPMADDEGFIYRP 100



 Score = 39.5 bits (90), Expect = 0.39,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 20/43 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           GF+     NS+ EM  M+  ++ +      ++  ++ +L  + 
Sbjct: 95  GFIYRPAINSVEEMANMMEASRSYQDSIEAMNTAKQLILRTLT 137


>gi|15642199|ref|NP_231831.1| flagellar basal body rod protein FlgB [Vibrio cholerae O1 biovar
          El Tor str. N16961]
 gi|121586275|ref|ZP_01676065.1| flagellar basal-body rod protein FlgB [Vibrio cholerae 2740-80]
 gi|121726570|ref|ZP_01679819.1| flagellar basal-body rod protein FlgB [Vibrio cholerae V52]
 gi|147673875|ref|YP_001217717.1| flagellar basal body rod protein FlgB [Vibrio cholerae O395]
 gi|153817081|ref|ZP_01969748.1| flagellar basal-body rod protein FlgB [Vibrio cholerae NCTC 8457]
 gi|153820794|ref|ZP_01973461.1| flagellar basal-body rod protein FlgB [Vibrio cholerae B33]
 gi|183179562|ref|ZP_02957773.1| flagellar basal-body rod protein FlgB [Vibrio cholerae MZO-3]
 gi|227082324|ref|YP_002810875.1| flagellar basal-body rod protein FlgB [Vibrio cholerae M66-2]
 gi|229507723|ref|ZP_04397228.1| flagellar basal-body rod protein FlgB [Vibrio cholerae BX 330286]
 gi|229512082|ref|ZP_04401561.1| flagellar basal-body rod protein FlgB [Vibrio cholerae B33]
 gi|229519218|ref|ZP_04408661.1| flagellar basal-body rod protein FlgB [Vibrio cholerae RC9]
 gi|229607227|ref|YP_002877875.1| flagellar basal body rod protein FlgB [Vibrio cholerae MJ-1236]
 gi|254849329|ref|ZP_05238679.1| flagellar basal-body rod protein FlgB [Vibrio cholerae MO10]
 gi|255747101|ref|ZP_05421046.1| flagellar basal-body rod protein FlgB [Vibrio cholera CIRS 101]
 gi|262161355|ref|ZP_06030465.1| flagellar basal-body rod protein FlgB [Vibrio cholerae INDRE
          91/1]
 gi|262167774|ref|ZP_06035476.1| flagellar basal-body rod protein FlgB [Vibrio cholerae RC27]
 gi|298500422|ref|ZP_07010227.1| flagellar basal-body rod protein FlgB [Vibrio cholerae MAK 757]
 gi|9656756|gb|AAF95345.1| flagellar basal-body rod protein FlgB [Vibrio cholerae O1 biovar
          El Tor str. N16961]
 gi|121549541|gb|EAX59567.1| flagellar basal-body rod protein FlgB [Vibrio cholerae 2740-80]
 gi|121631023|gb|EAX63402.1| flagellar basal-body rod protein FlgB [Vibrio cholerae V52]
 gi|126512349|gb|EAZ74943.1| flagellar basal-body rod protein FlgB [Vibrio cholerae NCTC 8457]
 gi|126521586|gb|EAZ78809.1| flagellar basal-body rod protein FlgB [Vibrio cholerae B33]
 gi|146315758|gb|ABQ20297.1| flagellar basal-body rod protein FlgB [Vibrio cholerae O395]
 gi|183012973|gb|EDT88273.1| flagellar basal-body rod protein FlgB [Vibrio cholerae MZO-3]
 gi|227010212|gb|ACP06424.1| flagellar basal-body rod protein FlgB [Vibrio cholerae M66-2]
 gi|227014096|gb|ACP10306.1| flagellar basal-body rod protein FlgB [Vibrio cholerae O395]
 gi|229343907|gb|EEO08882.1| flagellar basal-body rod protein FlgB [Vibrio cholerae RC9]
 gi|229352047|gb|EEO16988.1| flagellar basal-body rod protein FlgB [Vibrio cholerae B33]
 gi|229355228|gb|EEO20149.1| flagellar basal-body rod protein FlgB [Vibrio cholerae BX 330286]
 gi|229369882|gb|ACQ60305.1| flagellar basal-body rod protein FlgB [Vibrio cholerae MJ-1236]
 gi|254845034|gb|EET23448.1| flagellar basal-body rod protein FlgB [Vibrio cholerae MO10]
 gi|255735503|gb|EET90903.1| flagellar basal-body rod protein FlgB [Vibrio cholera CIRS 101]
 gi|262023839|gb|EEY42538.1| flagellar basal-body rod protein FlgB [Vibrio cholerae RC27]
 gi|262028666|gb|EEY47320.1| flagellar basal-body rod protein FlgB [Vibrio cholerae INDRE
          91/1]
 gi|297541115|gb|EFH77169.1| flagellar basal-body rod protein FlgB [Vibrio cholerae MAK 757]
          Length = 131

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 18/38 (47%)

Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
          E+    +A N++  +T GF+   + F + + A  +   
Sbjct: 20 ERNSEVIATNIAQANTPGFKAKGMDFQKALQAASSGAS 57


>gi|225871951|ref|YP_002753405.1| flagellar hook-associated protein FlgK [Acidobacterium capsulatum
           ATCC 51196]
 gi|225791881|gb|ACO31971.1| flagellar hook-associated protein FlgK [Acidobacterium capsulatum
           ATCC 51196]
          Length = 472

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 31/236 (13%), Positives = 74/236 (31%), Gaps = 9/236 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +FNI   A  A +  LS V++N++N +T G+        ++  +I+ +       V    
Sbjct: 7   AFNIATGALEADQAALSIVSNNVANANTTGYTREVPV-WQMADSIQINGITYGDGVNMTG 65

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK--- 120
               +      S   +     +  A  +       + +       +   S V  S     
Sbjct: 66  PQSQRSPVLQQSLDQQTQAQSDSAARLSALQQVQGVFSSSISTSSSSTSSTVGISQDLSS 125

Query: 121 ----YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
               +  L+       + Q           + +   + +++        S G V + N+ 
Sbjct: 126 FFSAWSALEANPTQTSLRQGVLSAAANLTSDFNSAAQQLSSQAASVDHQSAGLVTQINNL 185

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ-KFNSITTLIDENE 231
            +                  G LED+ A ++ ++  ++ + Q +    +  +    
Sbjct: 186 TAQIAKLNTQISSQSPNSDAGSLEDARATAISQLSALVGVNQIQNQGNSLTLTTTS 241


>gi|260768785|ref|ZP_05877719.1| flagellar basal-body rod protein FlgC [Vibrio furnissii CIP 102972]
 gi|260616815|gb|EEX42000.1| flagellar basal-body rod protein FlgC [Vibrio furnissii CIP 102972]
 gi|315180488|gb|ADT87402.1| flagellar basal-body rod protein C [Vibrio furnissii NCTC 11218]
          Length = 140

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 20/43 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++  S  N + EM  M+  T+ F +   +++  +      +R
Sbjct: 94  GYVYHSGINVVNEMADMMSSTRSFEANVEVLNNVKSMQQSLMR 136



 Score = 37.9 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 27/65 (41%), Gaps = 7/65 (10%)

Query: 3  TSFN-IGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQK 55
                  +A +A   RL+T++ N++N D+V       ++ +K  F+ V  ++       
Sbjct: 4  NGIYETSGSAMMAQTIRLNTISSNLANADSVASNPNDVYKPLKPVFTSVFNSLSAQSASG 63

Query: 56 ISFVA 60
             V 
Sbjct: 64 SVPVR 68


>gi|257457497|ref|ZP_05622665.1| flagellar hook-associated protein FlgK [Treponema vincentii ATCC
           35580]
 gi|257445120|gb|EEV20195.1| flagellar hook-associated protein FlgK [Treponema vincentii ATCC
           35580]
          Length = 625

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 6/41 (14%), Positives = 14/41 (34%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E+  +I     +N+    +    + +   I  + 
Sbjct: 584 SGVNIDEELADIIKFQHGYNATARFVAAVNEMLDTVINRLG 624


>gi|170742313|ref|YP_001770968.1| flagellar hook-associated protein FlgK [Methylobacterium sp. 4-46]
 gi|168196587|gb|ACA18534.1| flagellar hook-associated protein FlgK [Methylobacterium sp. 4-46]
          Length = 623

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 8/53 (15%), Positives = 22/53 (41%)

Query: 187 EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           + ++  T +  F E S      E+ ++I L   +++   ++      +   +R
Sbjct: 570 QKIALSTAQGRFSETSGVTIDEELSRLIQLQSAYSANARVLTAARDVLDTLMR 622


>gi|326319094|ref|YP_004236766.1| flagellar basal-body rod protein FlgB [Acidovorax avenae subsp.
          avenae ATCC 19860]
 gi|323375930|gb|ADX48199.1| flagellar basal-body rod protein FlgB [Acidovorax avenae subsp.
          avenae ATCC 19860]
          Length = 147

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 18/43 (41%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
           A +   +R   +A N++N DT G+      F++ +       
Sbjct: 14 NALMLRAERQRAIASNIANADTPGYVARDFNFADALRDATGQG 56


>gi|159045918|ref|YP_001534712.1| flagellar hook-associated protein FlgK [Dinoroseobacter shibae
          DFL 12]
 gi|157913678|gb|ABV95111.1| flagellar hook-associated protein FlgK [Dinoroseobacter shibae
          DFL 12]
          Length = 485

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 16/32 (50%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGF 34
          ++    L+   A  +  S V+ N++N  T G+
Sbjct: 5  STLGNALSGLTAASKAASVVSSNIANATTEGY 36



 Score = 37.9 bits (86), Expect = 1.3,   Method: Composition-based stats.
 Identities = 6/73 (8%), Positives = 25/73 (34%), Gaps = 1/73 (1%)

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
              +    +    +            T++   LE    ++  E+ +++ +   + +   +
Sbjct: 413 SDLLSTIGAARQASENEVSYTAAKWETLRSLELEGG-VDTDAELQKLLMIETAYAANARV 471

Query: 227 IDENEKSMLEAIR 239
           I   ++ +   +R
Sbjct: 472 IQTVDEMLDLLLR 484


>gi|313904267|ref|ZP_07837645.1| flagellar basal-body rod protein FlgB [Eubacterium cellulosolvens
          6]
 gi|313470817|gb|EFR66141.1| flagellar basal-body rod protein FlgB [Eubacterium cellulosolvens
          6]
          Length = 131

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 8/34 (23%), Positives = 18/34 (52%)

Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50
          QR +   +N++N DT  F++  + F + + +   
Sbjct: 21 QRQNITVNNIANVDTPKFKSQYLTFEDTLASRIR 54


>gi|290894002|ref|ZP_06556977.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
          FSL J2-071]
 gi|290556448|gb|EFD89987.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
          FSL J2-071]
          Length = 506

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 18/42 (42%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46
          FN  L+   A +        N+SN +T G+    V  + V G
Sbjct: 6  FNTSLSGMSAAQIANMVAQQNISNMNTPGYIRQAVDQTAVYG 47



 Score = 37.9 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 5/35 (14%), Positives = 12/35 (34%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            N   EM  ++     + + T  ++     M   +
Sbjct: 469 VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALL 503


>gi|27363699|ref|NP_759227.1| flagellar hook-associated protein FlgK [Vibrio vulnificus CMCP6]
 gi|27359815|gb|AAO08754.1| flagellar hook-associated protein FlgK [Vibrio vulnificus CMCP6]
          Length = 638

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 30/83 (36%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
           N+G  + L  +++L+T   N+SN +T G+    V  +             +        
Sbjct: 6  LNVGTQSVLTAQRQLNTTGHNISNVNTEGYSRQSVIQATNDPRQFGGSTYGMGVHVENVR 65

Query: 65 YLSKEVGSFISTGTELDFALEGD 87
              +        +  +FA +GD
Sbjct: 66 RSWDQFAVNELNLSTTNFANKGD 88



 Score = 37.2 bits (84), Expect = 2.1,   Method: Composition-based stats.
 Identities = 5/38 (13%), Positives = 14/38 (36%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           S  N   E   M+   Q + + + ++     +    ++
Sbjct: 599 SGVNLDEEAANMMRFQQAYMASSRIMQAANDTFNTILQ 636


>gi|315639201|ref|ZP_07894363.1| flagellar hook-associated protein 1 (HAP1) (flgK) [Campylobacter
          upsaliensis JV21]
 gi|315480527|gb|EFU71169.1| flagellar hook-associated protein 1 (HAP1) (flgK) [Campylobacter
          upsaliensis JV21]
          Length = 608

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 12/82 (14%), Positives = 24/82 (29%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
           + G+    A E +++T  +N+SN +   +   +V  +         +            
Sbjct: 7  LHTGVTGLKASEVQIATTGNNISNANATFYTRQRVVQTTNGYITTGGVQVGTGTAIESIV 66

Query: 65 YLSKEVGSFISTGTELDFALEG 86
           L  E   F            G
Sbjct: 67 RLHDEHAYFKLKNASTQQEYTG 88



 Score = 37.9 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 4/38 (10%), Positives = 15/38 (39%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            S  N+  E+  +I     + +   ++   ++ +   +
Sbjct: 567 KSGVNTNEELAALIQWQSSYGAAAKIVSTVDQMLDTLL 604


>gi|170680262|ref|YP_001742379.1| lateral flagellar hook associated protein 1 [Escherichia coli
          SMS-3-5]
 gi|170517980|gb|ACB16158.1| lateral flagellar hook associated protein 1 [Escherichia coli
          SMS-3-5]
          Length = 458

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 23/78 (29%), Gaps = 2/78 (2%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M    NIG +     +  L+  A N +N  T G+     + S + GA     +   + V 
Sbjct: 1  MD-MINIGYSGASTAQVELNVTAQNTANAMTTGYTRQVAEISTI-GASGGSPNSAGNGVQ 58

Query: 61 SGKEYLSKEVGSFISTGT 78
                            
Sbjct: 59 VDSIRRVSNQYQVNQVWY 76


>gi|167585200|ref|ZP_02377588.1| flagellar hook-associated protein FlgK [Burkholderia ubonensis
          Bu]
          Length = 656

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 27/77 (35%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
           N+G++   A    L+T ++N++N  T G+   +  ++E  G                 +
Sbjct: 1  MNLGISGLNAAIWGLTTTSNNIANAATPGYTIERPVYAEASGQYTGSGYLPQGVNTVTVQ 60

Query: 65 YLSKEVGSFISTGTELD 81
              +  S      +  
Sbjct: 61 RQYSQYLSDQLNSAQTQ 77



 Score = 38.3 bits (87), Expect = 0.94,   Method: Composition-based stats.
 Identities = 8/72 (11%), Positives = 19/72 (26%)

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
             +V    +  S        +      + +   E S  N   E   ++   Q + +   +
Sbjct: 581 ANYVNGIGNTASQLKSSNAAQTALVGQITKAQQEVSGVNQNEEAANLMQYQQLYQANAKV 640

Query: 227 IDENEKSMLEAI 238
           I          +
Sbjct: 641 IQTASTLFQTVL 652


>gi|221640803|ref|YP_002527065.1| flagellar hook-associated protein FlgK [Rhodobacter sphaeroides
          KD131]
 gi|332559781|ref|ZP_08414103.1| FlgK2 [Rhodobacter sphaeroides WS8N]
 gi|221161584|gb|ACM02564.1| Flagellar hook-associated protein FlgK [Rhodobacter sphaeroides
          KD131]
 gi|332277493|gb|EGJ22808.1| FlgK2 [Rhodobacter sphaeroides WS8N]
          Length = 481

 Score = 41.4 bits (95), Expect = 0.12,   Method: Composition-based stats.
 Identities = 11/77 (14%), Positives = 24/77 (31%), Gaps = 3/77 (3%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
          + +  L+      + +   ++N++N  T GF   ++   EV         Q +  V   +
Sbjct: 6  ALSNALSGLNVTSRSIENSSNNVANALTEGFARREL---EVTARSYGGGGQGVRTVGIDR 62

Query: 64 EYLSKEVGSFISTGTEL 80
                V          
Sbjct: 63 MVNMALVADRRLADAAT 79



 Score = 36.4 bits (82), Expect = 3.4,   Method: Composition-based stats.
 Identities = 4/35 (11%), Positives = 16/35 (45%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            ++  EM Q++ L + + +   ++   +  +   +
Sbjct: 445 VDTDREMEQLLLLERAYAANAKVVTACDDLLQYLL 479


>gi|218135314|ref|ZP_03464118.1| hypothetical protein BACPEC_03219 [Bacteroides pectinophilus ATCC
           43243]
 gi|217990699|gb|EEC56710.1| hypothetical protein BACPEC_03219 [Bacteroides pectinophilus ATCC
           43243]
          Length = 512

 Score = 41.4 bits (95), Expect = 0.12,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 28/102 (27%), Gaps = 4/102 (3%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE----VVGAIKNDIDQKISFV 59
             NI      A    ++T A N+SN +T G+   +   S        A        +   
Sbjct: 7   GLNIAYTGLQAASVSINTTAHNVSNVNTKGYSRQQTDVSADNALRTYAKYGTAGSGVIVN 66

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101
           +  +   S     + S  T   +      +           T
Sbjct: 67  SIQQVRDSYYDVKYRSNETNYGYYNTMQTYMTQLEDYLNEYT 108


>gi|170021354|ref|YP_001726308.1| flagellar hook-associated protein FlgK [Escherichia coli ATCC
          8739]
 gi|169756282|gb|ACA78981.1| flagellar hook-associated protein FlgK [Escherichia coli ATCC
          8739]
          Length = 458

 Score = 41.4 bits (95), Expect = 0.12,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 23/78 (29%), Gaps = 2/78 (2%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M    NIG +     +  L+  A N +N  T G+     + S + GA     +   + V 
Sbjct: 1  MD-MINIGYSGASTAQVELNVTAQNTANAMTTGYTRQVAEISTI-GASGGSPNSAGNGVQ 58

Query: 61 SGKEYLSKEVGSFISTGT 78
                            
Sbjct: 59 VDSIRRVSNQYQVNQVWY 76


>gi|310764863|gb|ADP09813.1| Flagellar basal-body rod protein FlgB [Erwinia sp. Ejp617]
          Length = 147

 Score = 41.4 bits (95), Expect = 0.12,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 23/50 (46%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          A   L +R   +A N++N DT G+    + FS+ +     +     S V+
Sbjct: 27 ALSLLSRRQEVLASNIANADTPGYMARDIDFSQQLKNTLANQSMAKSPVS 76


>gi|256830992|ref|YP_003159720.1| hypothetical protein Dbac_3229 [Desulfomicrobium baculatum DSM
          4028]
 gi|256580168|gb|ACU91304.1| protein of unknown function DUF1078 domain protein
          [Desulfomicrobium baculatum DSM 4028]
          Length = 123

 Score = 41.4 bits (95), Expect = 0.12,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 28/78 (35%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A   +       A+N++N +T GF + +V+F   +      +       ASG    S E 
Sbjct: 7  AMQGISFSQQVAANNVANMNTNGFHSSRVEFETGLNGQGVQVQDVYENTASGPLVPSGEY 66

Query: 71 GSFISTGTELDFALEGDA 88
                    +  +EG  
Sbjct: 67 VETDEGLRYEEMLVEGSN 84


>gi|77464882|ref|YP_354386.1| flagellar hook-associated protein FlgK [Rhodobacter sphaeroides
          2.4.1]
 gi|77389300|gb|ABA80485.1| putative flagellar hook protein [Rhodobacter sphaeroides 2.4.1]
          Length = 481

 Score = 41.4 bits (95), Expect = 0.12,   Method: Composition-based stats.
 Identities = 11/77 (14%), Positives = 24/77 (31%), Gaps = 3/77 (3%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
          + +  L+      + +   ++N++N  T GF   ++   EV         Q +  V   +
Sbjct: 6  ALSNALSGLNVTSRSIENSSNNVANALTEGFARREL---EVTARSYGGGGQGVRTVGIDR 62

Query: 64 EYLSKEVGSFISTGTEL 80
                V          
Sbjct: 63 MVNMALVADRRLADAAT 79



 Score = 36.4 bits (82), Expect = 3.4,   Method: Composition-based stats.
 Identities = 4/35 (11%), Positives = 16/35 (45%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            ++  EM Q++ L + + +   ++   +  +   +
Sbjct: 445 VDTDREMEQLLLLERAYAANAKVVTACDDLLQYLL 479


>gi|116872094|ref|YP_848875.1| flagellar hook-associated protein FlgK [Listeria welshimeri
          serovar 6b str. SLCC5334]
 gi|116740972|emb|CAK20092.1| flagellar hook-associated protein 1-related protein [Listeria
          welshimeri serovar 6b str. SLCC5334]
          Length = 506

 Score = 41.4 bits (95), Expect = 0.12,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 18/42 (42%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46
          FN  L+   A +        N+SN +T G+    V  + V G
Sbjct: 6  FNTSLSGMSAAQIANMVAQQNISNMNTPGYIRQAVDQTAVYG 47



 Score = 37.5 bits (85), Expect = 1.4,   Method: Composition-based stats.
 Identities = 5/35 (14%), Positives = 12/35 (34%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            N   EM  ++     + + T  ++     M   +
Sbjct: 469 VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALL 503


>gi|88704309|ref|ZP_01102023.1| flagellar basal-body rod protein FlgB [Congregibacter litoralis
           KT71]
 gi|88701360|gb|EAQ98465.1| flagellar basal-body rod protein FlgB [Congregibacter litoralis
           KT71]
          Length = 146

 Score = 41.4 bits (95), Expect = 0.12,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 29/78 (37%), Gaps = 2/78 (2%)

Query: 11  AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
           A  A +  L  ++ N++N+DT G++   + F   + +     D      A+         
Sbjct: 32  ALRAQKTEL--LSANIANSDTPGYKARDIDFRAAMQSAMGAQDGMTRTHAAHLNASGTPG 89

Query: 71  GSFISTGTELDFALEGDA 88
            +          +L+G+ 
Sbjct: 90  STEPMYRIPTQPSLDGNT 107


>gi|261211325|ref|ZP_05925613.1| flagellar basal-body rod protein FlgB [Vibrio sp. RC341]
 gi|260839280|gb|EEX65906.1| flagellar basal-body rod protein FlgB [Vibrio sp. RC341]
          Length = 131

 Score = 41.4 bits (95), Expect = 0.12,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 18/38 (47%)

Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
          E+    +A N++  +T GF+   + F + + A  +   
Sbjct: 20 ERNSEVIATNIAQANTPGFKAKGMDFQKALQAASSGAS 57


>gi|254182888|ref|ZP_04889481.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           1655]
 gi|184213422|gb|EDU10465.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           1655]
          Length = 452

 Score = 41.4 bits (95), Expect = 0.12,   Method: Composition-based stats.
 Identities = 23/195 (11%), Positives = 50/195 (25%), Gaps = 1/195 (0%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
                IG++   A  Q L   + N +N  T G+    V  S  +    +     +    S
Sbjct: 1   MNIIYIGMSGIRAANQSLLAASQNTANIATAGYSRRGVLLSTGLTGGVDASG-LLRLNES 59

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
            K     +               +        +P       +        G+L +ASG  
Sbjct: 60  YKTQQLWQAAGQYGRYDAAQTYFDQLEALFGGNPVDGKTQANDLGFGKFIGALEAASGDP 119

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
               + +  I             +  ++ + + I    + +V+   G  +          
Sbjct: 120 GDSVLRNGVIDAANSMTKQFNNMRSVLTNQLRSIEQQRVTTVEQVNGLAKTVAELNGKIA 179

Query: 182 PPTPLEDLSGVTVKR 196
                       + +
Sbjct: 180 AGQASGADVSALMDQ 194


>gi|47566126|ref|ZP_00237164.1| flagellar basal-body rod protein flgB [Bacillus cereus G9241]
 gi|47557043|gb|EAL15373.1| flagellar basal-body rod protein flgB [Bacillus cereus G9241]
          Length = 135

 Score = 41.4 bits (95), Expect = 0.12,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 29/72 (40%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
             L  + +TV+ N++N +T G++   V F+E +           + + +  +       
Sbjct: 12 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKSNTADLKTNPDLYQTNEM 71

Query: 72 SFISTGTELDFA 83
             +  T+  +A
Sbjct: 72 HLPTVNTKNTYA 83


>gi|328958287|ref|YP_004375673.1| flagellar basal body rod protein FlgB [Carnobacterium sp. 17-4]
 gi|328674611|gb|AEB30657.1| flagellar basal body rod protein FlgB [Carnobacterium sp. 17-4]
          Length = 142

 Score = 41.4 bits (95), Expect = 0.12,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 21/43 (48%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
           A  A   R   ++ N++N +T  ++  KV+F  ++  + N  
Sbjct: 27 NALDAASMRQEMISSNIANVNTADYKVNKVEFESILENVSNGT 69


>gi|311105941|ref|YP_003978794.1| flagellar hook-associated protein FlgK [Achromobacter
          xylosoxidans A8]
 gi|310760630|gb|ADP16079.1| flagellar hook-associated protein FlgK [Achromobacter
          xylosoxidans A8]
          Length = 555

 Score = 41.4 bits (95), Expect = 0.12,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 22/51 (43%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
             + + L    A +  L+T + N++N  TVG+   +V  S       ++ 
Sbjct: 1  MNMYKLALGGLNAAQAGLATTSHNINNATTVGYNRQRVMVSTAGAQATSNG 51


>gi|331671810|ref|ZP_08372606.1| flagellar hook-associated protein FlgK [Escherichia coli TA280]
 gi|331070799|gb|EGI42158.1| flagellar hook-associated protein FlgK [Escherichia coli TA280]
          Length = 458

 Score = 41.4 bits (95), Expect = 0.12,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 23/78 (29%), Gaps = 2/78 (2%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M    NIG +     +  L+  A N +N  T G+     + S + GA     +   + V 
Sbjct: 1  MD-MINIGYSGASTAQVELNVTAQNTANAMTTGYTRQVAEISTI-GASGGSPNSAGNGVQ 58

Query: 61 SGKEYLSKEVGSFISTGT 78
                            
Sbjct: 59 VDSIRRVSNQYQVNQVWY 76


>gi|254470337|ref|ZP_05083741.1| flagellar hook-associated protein, putative [Pseudovibrio sp.
           JE062]
 gi|211960648|gb|EEA95844.1| flagellar hook-associated protein, putative [Pseudovibrio sp.
           JE062]
          Length = 519

 Score = 41.4 bits (95), Expect = 0.12,   Method: Composition-based stats.
 Identities = 6/64 (9%), Positives = 22/64 (34%), Gaps = 1/64 (1%)

Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDS-NANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           S I+           +  ++ +   E+S   +   E+ ++  L   + +   ++   ++ 
Sbjct: 452 SQIASAATSAESNSKAVTSIAKNAYENSYKVDVDEELVKLTELQNAYAANARVLSAIDEM 511

Query: 234 MLEA 237
               
Sbjct: 512 YDTL 515


>gi|254299680|ref|ZP_04967129.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           406e]
 gi|157809590|gb|EDO86760.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           406e]
          Length = 452

 Score = 41.4 bits (95), Expect = 0.12,   Method: Composition-based stats.
 Identities = 23/195 (11%), Positives = 50/195 (25%), Gaps = 1/195 (0%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
                IG++   A  Q L   + N +N  T G+    V  S  +    +     +    S
Sbjct: 1   MNIIYIGMSGIRAANQSLLAASQNTANIATAGYSRRGVLLSTGLTGGVDASG-LLRLNES 59

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
            K     +               +        +P       +        G+L +ASG  
Sbjct: 60  YKTQQLWQAAGQYGRYDAAQTYFDQLEALFGGNPVDGKTQANDLGFGKFIGALEAASGDP 119

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
               + +  I             +  ++ + + I    + +V+   G  +          
Sbjct: 120 GDSVLRNGVIDAANSMTKQFNNMRSVLTNQLRSIEQQRVTTVEQVNGLAKTVAELNGKIA 179

Query: 182 PPTPLEDLSGVTVKR 196
                       + +
Sbjct: 180 AGQASGADVSALMDQ 194


>gi|16764530|ref|NP_460145.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Typhimurium str. LT2]
 gi|62179691|ref|YP_216108.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Choleraesuis str. SC-B67]
 gi|161614603|ref|YP_001588568.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Paratyphi B str. SPB7]
 gi|167553038|ref|ZP_02346788.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Saintpaul str. SARA29]
 gi|167994038|ref|ZP_02575130.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168237256|ref|ZP_02662314.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Schwarzengrund str. SL480]
 gi|168244773|ref|ZP_02669705.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Heidelberg str. SL486]
 gi|168264033|ref|ZP_02686006.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Hadar str. RI_05P066]
 gi|168467126|ref|ZP_02700968.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Newport str. SL317]
 gi|168822617|ref|ZP_02834617.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Weltevreden str. HI_N05-537]
 gi|194445886|ref|YP_002040428.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Newport str. SL254]
 gi|194449295|ref|YP_002045173.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Heidelberg str. SL476]
 gi|194737837|ref|YP_002114173.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Schwarzengrund str. CVM19633]
 gi|197250045|ref|YP_002146869.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Agona str. SL483]
 gi|197262046|ref|ZP_03162120.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Saintpaul str. SARA23]
 gi|198242083|ref|YP_002215963.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Dublin str. CT_02021853]
 gi|200390920|ref|ZP_03217531.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Virchow str. SL491]
 gi|204930812|ref|ZP_03221685.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Javiana str. GA_MM04042433]
 gi|205353088|ref|YP_002226889.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Gallinarum str. 287/91]
 gi|207857318|ref|YP_002243969.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Enteritidis str. P125109]
 gi|224584322|ref|YP_002638120.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Paratyphi C strain RKS4594]
 gi|238911006|ref|ZP_04654843.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Tennessee str. CDC07-0191]
 gi|120293|sp|P16437|FLGB_SALTY RecName: Full=Flagellar basal-body rod protein flgB; AltName:
          Full=Putative proximal rod protein
 gi|47669|emb|CAA36309.1| unnamed protein product [Salmonella enterica subsp. enterica
          serovar Typhimurium]
 gi|217058|dbj|BAA02861.1| FlgB [Salmonella enterica subsp. enterica serovar Typhimurium]
 gi|16419691|gb|AAL20104.1| flagellar biosynthesis protein [Salmonella enterica subsp.
          enterica serovar Typhimurium str. LT2]
 gi|62127324|gb|AAX65027.1| flagellar biosynthesis, cell-proximal portion of basal-body rod
          [Salmonella enterica subsp. enterica serovar
          Choleraesuis str. SC-B67]
 gi|161363967|gb|ABX67735.1| hypothetical protein SPAB_02353 [Salmonella enterica subsp.
          enterica serovar Paratyphi B str. SPB7]
 gi|194404549|gb|ACF64771.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Newport str. SL254]
 gi|194407599|gb|ACF67818.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Heidelberg str. SL476]
 gi|194713339|gb|ACF92560.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Schwarzengrund str. CVM19633]
 gi|195630354|gb|EDX48980.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Newport str. SL317]
 gi|197213748|gb|ACH51145.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Agona str. SL483]
 gi|197240301|gb|EDY22921.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Saintpaul str. SARA23]
 gi|197289757|gb|EDY29118.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Schwarzengrund str. SL480]
 gi|197936599|gb|ACH73932.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Dublin str. CT_02021853]
 gi|199603365|gb|EDZ01911.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Virchow str. SL491]
 gi|204320271|gb|EDZ05475.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Javiana str. GA_MM04042433]
 gi|205272869|emb|CAR37798.1| putative flagellar basal-body rod protein FlgB (proximal rod
          protein) [Salmonella enterica subsp. enterica serovar
          Gallinarum str. 287/91]
 gi|205322410|gb|EDZ10249.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Saintpaul str. SARA29]
 gi|205328023|gb|EDZ14787.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205336425|gb|EDZ23189.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Heidelberg str. SL486]
 gi|205341041|gb|EDZ27805.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Weltevreden str. HI_N05-537]
 gi|205347333|gb|EDZ33964.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Hadar str. RI_05P066]
 gi|206709121|emb|CAR33454.1| putative flagellar basal-body rod protein FlgB (proximal rod
          protein) [Salmonella enterica subsp. enterica serovar
          Enteritidis str. P125109]
 gi|224468849|gb|ACN46679.1| flagellar basal body rod protein [Salmonella enterica subsp.
          enterica serovar Paratyphi C strain RKS4594]
 gi|261246385|emb|CBG24194.1| putative flagellar basal-body rod protein FlgB (proximal rod
          protein) [Salmonella enterica subsp. enterica serovar
          Typhimurium str. D23580]
 gi|267992948|gb|ACY87833.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Typhimurium str. 14028S]
 gi|301157715|emb|CBW17207.1| putative flagellar basal-body rod protein FlgB (proximal rod
          protein) [Salmonella enterica subsp. enterica serovar
          Typhimurium str. SL1344]
 gi|312912161|dbj|BAJ36135.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Typhimurium str. T000240]
 gi|320086386|emb|CBY96159.1| Flagellar basal-body rod protein flgB putative proximal rod
          protein [Salmonella enterica subsp. enterica serovar
          Weltevreden str. 2007-60-3289-1]
 gi|321223792|gb|EFX48855.1| Flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Typhimurium str. TN061786]
 gi|322616544|gb|EFY13453.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Montevideo str. 315996572]
 gi|322620515|gb|EFY17379.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Montevideo str. 495297-1]
 gi|322622509|gb|EFY19354.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Montevideo str. 495297-3]
 gi|322629660|gb|EFY26435.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Montevideo str. 495297-4]
 gi|322632620|gb|EFY29366.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Montevideo str. 515920-1]
 gi|322636885|gb|EFY33588.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Montevideo str. 515920-2]
 gi|322641577|gb|EFY38215.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Montevideo str. 531954]
 gi|322644067|gb|EFY40613.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322650032|gb|EFY46450.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Montevideo str. OH_2009072675]
 gi|322653958|gb|EFY50281.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322658490|gb|EFY54752.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Montevideo str. 19N]
 gi|322663348|gb|EFY59550.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Montevideo str. 81038-01]
 gi|322670082|gb|EFY66222.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Montevideo str. MD_MDA09249507]
 gi|322674854|gb|EFY70945.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Montevideo str. 414877]
 gi|322676676|gb|EFY72743.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Montevideo str. 366867]
 gi|322682598|gb|EFY78617.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Montevideo str. 413180]
 gi|322686649|gb|EFY82628.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Montevideo str. 446600]
 gi|322714161|gb|EFZ05732.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Choleraesuis str. A50]
 gi|323129444|gb|ADX16874.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Typhimurium str. 4/74]
 gi|323195763|gb|EFZ80939.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Montevideo str. 609458-1]
 gi|323198345|gb|EFZ83449.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Montevideo str. 556150-1]
 gi|323203171|gb|EFZ88201.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Montevideo str. 609460]
 gi|323209174|gb|EFZ94111.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Montevideo str. 507440-20]
 gi|323209678|gb|EFZ94607.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Montevideo str. 556152]
 gi|323217866|gb|EGA02581.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Montevideo str. MB101509-0077]
 gi|323222154|gb|EGA06538.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Montevideo str. MB102109-0047]
 gi|323224926|gb|EGA09184.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Montevideo str. MB110209-0055]
 gi|323229668|gb|EGA13791.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Montevideo str. MB111609-0052]
 gi|323232893|gb|EGA16989.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Montevideo str. 2009083312]
 gi|323240628|gb|EGA24670.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Montevideo str. 2009085258]
 gi|323242942|gb|EGA26963.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Montevideo str. 315731156]
 gi|323250259|gb|EGA34148.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Montevideo str. IA_2009159199]
 gi|323252634|gb|EGA36472.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Montevideo str. IA_2010008282]
 gi|323258838|gb|EGA42491.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Montevideo str. IA_2010008283]
 gi|323261027|gb|EGA44620.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Montevideo str. IA_2010008284]
 gi|323266936|gb|EGA50421.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Montevideo str. IA_2010008285]
 gi|323269977|gb|EGA53426.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Montevideo str. IA_2010008287]
 gi|326623711|gb|EGE30056.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Dublin str. 3246]
 gi|326628168|gb|EGE34511.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Gallinarum str. 9]
 gi|332988065|gb|AEF07048.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Typhimurium str. UK-1]
          Length = 138

 Score = 41.4 bits (95), Expect = 0.12,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 26/66 (39%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   +A N++N DT G++   + F+  +  +     ++   VA          
Sbjct: 15 ALNLRAQRQEILAANIANADTPGYQARDIDFASELKKVMVRGREETGGVALTLTSSHHIP 74

Query: 71 GSFIST 76
             +S+
Sbjct: 75 AQAVSS 80


>gi|284920905|emb|CBG33968.1| flagellar hook-associated protein 1 [Escherichia coli 042]
          Length = 547

 Score = 41.4 bits (95), Expect = 0.12,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGTGG 52


>gi|258511107|ref|YP_003184541.1| hypothetical protein Aaci_1117 [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
 gi|257477833|gb|ACV58152.1| protein of unknown function DUF1078 domain protein
           [Alicyclobacillus acidocaldarius subsp. acidocaldarius
           DSM 446]
          Length = 69

 Score = 41.4 bits (95), Expect = 0.12,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 17/37 (45%)

Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           N N   +M  +I  T+ + +  T  D  ++  + A+ 
Sbjct: 30  NVNLTTQMVDLIQATRAYQANATAFDAAKQMAVTALS 66



 Score = 39.1 bits (89), Expect = 0.48,   Method: Composition-based stats.
 Identities = 8/27 (29%), Positives = 16/27 (59%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTD 30
          S NI  +   A +  L+ +A+N++N +
Sbjct: 6  SMNISASGLAANQLWLNVIANNIANVN 32


>gi|74311643|ref|YP_310062.1| flagellar hook-associated protein FlgK [Shigella sonnei Ss046]
 gi|73855120|gb|AAZ87827.1| flagellar hook-filament junction protein 1 [Shigella sonnei
          Ss046]
 gi|323165592|gb|EFZ51379.1| flagellar hook-associated protein FlgK [Shigella sonnei 53G]
          Length = 547

 Score = 41.4 bits (95), Expect = 0.12,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|228964727|ref|ZP_04125834.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
          serovar sotto str. T04001]
 gi|228794977|gb|EEM42476.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis
          serovar sotto str. T04001]
          Length = 128

 Score = 41.4 bits (95), Expect = 0.12,   Method: Composition-based stats.
 Identities = 5/33 (15%), Positives = 13/33 (39%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG 33
          M  + N   +      + +   ++N+ N +T  
Sbjct: 1  MFQAINASGSGLTTARKWMEVTSNNIVNANTTA 33



 Score = 38.3 bits (87), Expect = 0.89,   Method: Composition-based stats.
 Identities = 7/37 (18%), Positives = 21/37 (56%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           G++   N +   EM  ++   + + + T++++ N+K+
Sbjct: 91  GYVRYPNIDVTAEMTNVMVAQKMYEANTSVLNANKKN 127


>gi|170748109|ref|YP_001754369.1| flagellar basal body rod protein FlgC [Methylobacterium
           radiotolerans JCM 2831]
 gi|170654631|gb|ACB23686.1| flagellar basal-body rod protein FlgC [Methylobacterium
           radiotolerans JCM 2831]
          Length = 138

 Score = 41.4 bits (95), Expect = 0.12,   Method: Composition-based stats.
 Identities = 8/46 (17%), Positives = 18/46 (39%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G ++  N N + EM  M    + + +   +I +    +   I  + 
Sbjct: 92  GNVKLPNVNMLIEMADMREANRSYEANLQMIKQTRAMVASIIELLR 137



 Score = 41.0 bits (94), Expect = 0.15,   Method: Composition-based stats.
 Identities = 11/101 (10%), Positives = 28/101 (27%), Gaps = 8/101 (7%)

Query: 7   IGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQKISFV 59
           I  +   A  +RL  +A+N++N  + G       +    + F   +          I  +
Sbjct: 11  IAGSGMEAQSERLRVIAENIANARSTGQTAGSDPYTRKTITFRTALDRASGTAAVAIRQI 70

Query: 60  A-SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
                 +  +      +   + +  L         +     
Sbjct: 71  GEDKAPFRVEYDPGNPAADADGNVKLPNVNMLIEMADMREA 111


>gi|57505236|ref|ZP_00371165.1| flagellar hook-associated protein 1 (HAP1) (flgK) [Campylobacter
          upsaliensis RM3195]
 gi|57016372|gb|EAL53157.1| flagellar hook-associated protein 1 (HAP1) (flgK) [Campylobacter
          upsaliensis RM3195]
          Length = 608

 Score = 41.4 bits (95), Expect = 0.12,   Method: Composition-based stats.
 Identities = 12/82 (14%), Positives = 24/82 (29%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
           + G+    A E +++T  +N+SN +   +   +V  +         +            
Sbjct: 7  LHTGVTGLKASEVQIATTGNNISNANATFYTRQRVVQTTNGYITTGGVQVGTGTAIESIV 66

Query: 65 YLSKEVGSFISTGTELDFALEG 86
           L  E   F            G
Sbjct: 67 RLHDEHAYFKLKNASTQQEYTG 88



 Score = 37.5 bits (85), Expect = 1.5,   Method: Composition-based stats.
 Identities = 4/38 (10%), Positives = 15/38 (39%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            S  N+  E+  +I     + +   ++   ++ +   +
Sbjct: 567 KSGVNTNEELAALIQWQSSYGAAAKIVSTVDQMLDTLL 604


>gi|262404543|ref|ZP_06081098.1| flagellar basal-body rod protein FlgB [Vibrio sp. RC586]
 gi|262349575|gb|EEY98713.1| flagellar basal-body rod protein FlgB [Vibrio sp. RC586]
          Length = 131

 Score = 41.4 bits (95), Expect = 0.12,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 17/38 (44%)

Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
          E     +A N++  +T GF+   + F + + A  +   
Sbjct: 20 EHNSEVIATNIAQANTPGFKAKGMDFQKALQAASSGAS 57


>gi|168234100|ref|ZP_02659158.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Kentucky str. CDC 191]
 gi|194469067|ref|ZP_03075051.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Kentucky str. CVM29188]
 gi|194455431|gb|EDX44270.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Kentucky str. CVM29188]
 gi|205331910|gb|EDZ18674.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Kentucky str. CDC 191]
          Length = 138

 Score = 41.4 bits (95), Expect = 0.12,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 26/66 (39%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   +A N++N DT G++   + F+  +  +     ++   VA          
Sbjct: 15 ALNLRAQRQEILAANIANADTPGYQARDIDFASELKKVMVRGREETGGVALSLTSSHHIP 74

Query: 71 GSFIST 76
             +S+
Sbjct: 75 AQAVSS 80


>gi|126176150|ref|YP_001052299.1| flagellar hook-associated protein FlgK [Shewanella baltica OS155]
 gi|125999355|gb|ABN63430.1| flagellar hook-associated protein FlgK [Shewanella baltica OS155]
          Length = 457

 Score = 41.4 bits (95), Expect = 0.12,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 19/39 (48%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
           +  NIG +  LA    L+  ++N++N    G+   +V 
Sbjct: 1  MSMLNIGKSGLLASMAALNATSNNVANAMVAGYSRQQVM 39



 Score = 40.2 bits (92), Expect = 0.22,   Method: Composition-based stats.
 Identities = 6/39 (15%), Positives = 13/39 (33%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            S  N   E   +I   Q + +   +I   ++     + 
Sbjct: 417 TSGVNPDEEGINLIIYQQSYMANAKVISTADQLFQTMLS 455


>gi|304412502|ref|ZP_07394108.1| flagellar hook-associated protein FlgK [Shewanella baltica OS183]
 gi|307307161|ref|ZP_07586899.1| flagellar hook-associated protein FlgK [Shewanella baltica BA175]
 gi|304349144|gb|EFM13556.1| flagellar hook-associated protein FlgK [Shewanella baltica OS183]
 gi|306910400|gb|EFN40831.1| flagellar hook-associated protein FlgK [Shewanella baltica BA175]
          Length = 457

 Score = 41.4 bits (95), Expect = 0.13,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 19/39 (48%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
           +  NIG +  LA    L+  ++N++N    G+   +V 
Sbjct: 1  MSMLNIGKSGLLASMAALNATSNNVANAMVAGYSRQQVM 39



 Score = 40.2 bits (92), Expect = 0.23,   Method: Composition-based stats.
 Identities = 6/39 (15%), Positives = 13/39 (33%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            S  N   E   +I   Q + +   +I   ++     + 
Sbjct: 417 TSGVNPDEEGINLIIYQQSYMANAKVISTADQLFQTMLS 455


>gi|301051132|ref|ZP_07197963.1| flagellar hook-associated protein FlgK [Escherichia coli MS
          185-1]
 gi|300297216|gb|EFJ53601.1| flagellar hook-associated protein FlgK [Escherichia coli MS
          185-1]
          Length = 425

 Score = 41.4 bits (95), Expect = 0.13,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|259908815|ref|YP_002649171.1| flagellar basal body rod protein FlgB [Erwinia pyrifoliae Ep1/96]
 gi|224964437|emb|CAX55946.1| Flagellar basal-body rod protein [Erwinia pyrifoliae Ep1/96]
 gi|283478797|emb|CAY74713.1| Flagellar basal-body rod protein flgB [Erwinia pyrifoliae DSM
          12163]
 gi|310767287|gb|ADP12237.1| flagellar basal body rod protein FlgB [Erwinia sp. Ejp617]
          Length = 137

 Score = 41.4 bits (95), Expect = 0.13,   Method: Composition-based stats.
 Identities = 11/65 (16%), Positives = 22/65 (33%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   +A N++N DT G++   + F+  +         + S ++          
Sbjct: 15 ALNLRAQRQEILASNIANADTPGYQARDIDFASQLTKAVEHGRAQGSGMSLTVTSARHIP 74

Query: 71 GSFIS 75
               
Sbjct: 75 AETQQ 79


>gi|207110308|ref|ZP_03244470.1| flagellar basal body rod protein FlgG [Helicobacter pylori
           HPKX_438_CA4C1]
          Length = 114

 Score = 41.4 bits (95), Expect = 0.13,   Method: Composition-based stats.
 Identities = 18/114 (15%), Positives = 35/114 (30%), Gaps = 6/114 (5%)

Query: 93  ESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQK 151
                   TR G FK+ + G+LV++ G   +  +            +       +     
Sbjct: 1   MPDGTTAYTRSGNFKLDEQGNLVTSEGYLLIPQITLPEDTTQVNIGVDGTVSVTQGLQTT 60

Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLE 200
             VI  + L +     G     ++  S           +        +++GFLE
Sbjct: 61  SNVIGQITLANFVNPAGLHSMGDNLFSITNASGDAIVGNPDSQGLGKLRQGFLE 114


>gi|161503738|ref|YP_001570850.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160865085|gb|ABX21708.1| hypothetical protein SARI_01823 [Salmonella enterica subsp.
          arizonae serovar 62:z4,z23:--]
          Length = 138

 Score = 41.4 bits (95), Expect = 0.13,   Method: Composition-based stats.
 Identities = 12/66 (18%), Positives = 26/66 (39%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   +A N++N DT G++   + F+  +  +     ++   V+          
Sbjct: 15 ALNLRAQRQEILAANIANADTPGYQARDIDFASELKKVMVRGREETGGVSLTLTSSHHIP 74

Query: 71 GSFIST 76
             +S+
Sbjct: 75 AQAVSS 80


>gi|325474917|gb|EGC78103.1| flagellar hook-associated protein FlgK [Treponema denticola F0402]
          Length = 623

 Score = 41.0 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 6/41 (14%), Positives = 14/41 (34%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E+  +I     +N+    +    + +   I  + 
Sbjct: 582 SGVNIDEELSDIIKFQHGYNASARFVSVINEMIDTVINRMG 622



 Score = 36.0 bits (81), Expect = 4.5,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 19/50 (38%), Gaps = 3/50 (6%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDIDQKIS 57
          +  A +Q + T   N+SN+ T G+   +V    F  +        +    
Sbjct: 13 SLFAHQQSIQTAGHNISNSSTKGYTRQRVNLEAFEPIYRPDLTRAETPGQ 62


>gi|306813297|ref|ZP_07447490.1| flagellar hook-associated protein FlgK [Escherichia coli NC101]
 gi|305854060|gb|EFM54499.1| flagellar hook-associated protein FlgK [Escherichia coli NC101]
          Length = 458

 Score = 41.0 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 66/222 (29%), Gaps = 14/222 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M    NIG +     +  L+  A N +N  T G+     + S + GA     +   + V 
Sbjct: 1   MD-MINIGYSGASTAQVELNVTAQNTANAMTTGYTRQVAEISTI-GASGGSPNSAGNGVQ 58

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
                        +S   +++      + +   S +   LT+       D+ SL      
Sbjct: 59  VDSIR-------RVSNQYQVNQVWYAASDYGYYSTQQEYLTQLEAVLSDDNSSLSGGFDN 111

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV----IATMGLYSVDMSQGFVRRENSG 176
           +      +             + E G +S +       I +     +   Q  V + N+ 
Sbjct: 112 FFAALNEATTSPDDSALREQVISEAGALSLRIDNTLDYIDSQSTEIISQQQAMVSQINTL 171

Query: 177 ISPNIPPTPLEDLSGVTV-KRGFLEDSNANSMYEMGQMIHLT 217
            S           +         L D+    + E+  M+ + 
Sbjct: 172 TSGIASYNQQIAQAEANGDNASALYDARDQMVEELSGMMDVQ 213


>gi|213418634|ref|ZP_03351700.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Typhi str. E01-6750]
          Length = 142

 Score = 41.0 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 9/52 (17%), Positives = 23/52 (44%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+TV++N++N +  G+       ++    +    
Sbjct: 1  MSSLINHAMSGLNAAQAALNTVSNNINNYNVAGYTRQTTILAQANSTLGAGG 52


>gi|77460472|ref|YP_349979.1| flagellar basal body rod protein FlgB [Pseudomonas fluorescens
           Pf0-1]
 gi|77384475|gb|ABA75988.1| putative flagellar basal-body rod protein FlgB (proximal rod
           protein) [Pseudomonas fluorescens Pf0-1]
          Length = 135

 Score = 41.0 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 13/98 (13%), Positives = 34/98 (34%), Gaps = 3/98 (3%)

Query: 17  QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76
           QR   +A+N++N DT  ++   ++FS+V+ A      +  +   +     S+ + +    
Sbjct: 21  QRAEVLANNIANADTPNYKARDLEFSKVLEA---QSQKNANGTIALNMTNSRHIEAEGLG 77

Query: 77  GTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSL 114
             +           +++            +     G  
Sbjct: 78  NGDESLMYRTPMQPSIDQNTVDAQLEQSNYAENAVGFQ 115


>gi|126463724|ref|YP_001044838.1| flagellar hook-associated protein FlgK [Rhodobacter sphaeroides
          ATCC 17029]
 gi|126105388|gb|ABN78066.1| flagellar hook-associated protein FlgK [Rhodobacter sphaeroides
          ATCC 17029]
          Length = 481

 Score = 41.0 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 11/77 (14%), Positives = 24/77 (31%), Gaps = 3/77 (3%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
          + +  L+      + +   ++N++N  T GF   ++   EV         Q +  V   +
Sbjct: 6  ALSNALSGLNVTSRSIENSSNNVANALTEGFARREL---EVTARSYGGGGQGVRTVGIDR 62

Query: 64 EYLSKEVGSFISTGTEL 80
                V          
Sbjct: 63 MMNMALVADRRLADAAT 79



 Score = 36.4 bits (82), Expect = 3.7,   Method: Composition-based stats.
 Identities = 4/35 (11%), Positives = 16/35 (45%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            ++  EM Q++ L + + +   ++   +  +   +
Sbjct: 445 VDTDREMEQLLLLERAYAANAKVVTACDDLLQYLL 479


>gi|315453582|ref|YP_004073852.1| putative flagellar hook-associated protein [Helicobacter felis ATCC
           49179]
 gi|315132634|emb|CBY83262.1| putative flagellar hook-associated protein [Helicobacter felis ATCC
           49179]
          Length = 606

 Score = 41.0 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 15/37 (40%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  ++  EM  +I     + +   +I   ++ +   +
Sbjct: 566 SGVSTDEEMVNLIKYQGGYAANAKVITAIDRMIETLL 602



 Score = 39.1 bits (89), Expect = 0.49,   Method: Composition-based stats.
 Identities = 6/29 (20%), Positives = 12/29 (41%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTD 30
           +S N       A +  +    +N+SN +
Sbjct: 5  LSSLNTSYTGLQAHQVMVDVTGNNISNAN 33


>gi|90577342|ref|ZP_01233153.1| flagellar basal body rod protein [Vibrio angustum S14]
 gi|90440428|gb|EAS65608.1| flagellar basal body rod protein [Vibrio angustum S14]
          Length = 144

 Score = 41.0 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 19/43 (44%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   + + + EM  M+  T+ F +   ++   +      +R
Sbjct: 97  GYVYYPDIDVVAEMADMMSATRSFETNVEVLSNVKSMQQGLLR 139



 Score = 38.3 bits (87), Expect = 0.91,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 6/71 (8%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          I  +A  A   RL+TVA N++N D V       ++ +K  F+ V    +   DQ     A
Sbjct: 9  IAGSAMNAQTIRLNTVASNLANADAVAANPNDAYKALKPVFATVYNKTQLTGDQADYPSA 68

Query: 61 SGKEYLSKEVG 71
            +     +  
Sbjct: 69 EVRIMDVVQHA 79


>gi|300716215|ref|YP_003741018.1| flagellar basal-body rod protein [Erwinia billingiae Eb661]
 gi|299062051|emb|CAX59167.1| Flagellar basal-body rod protein [Erwinia billingiae Eb661]
          Length = 137

 Score = 41.0 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 11/65 (16%), Positives = 24/65 (36%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   +A N++N DT G++   + F+  +  +      + S ++          
Sbjct: 15 ALNLRAQRQEILASNIANADTPGYQARDIDFASQMNKVMEQGRAEGSGLSLAVTSARHIP 74

Query: 71 GSFIS 75
             + 
Sbjct: 75 AETLQ 79


>gi|228952123|ref|ZP_04114218.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
          kurstaki str. T03a001]
 gi|229043497|ref|ZP_04191207.1| Flagellar basal-body rod protein [Bacillus cereus AH676]
 gi|229109200|ref|ZP_04238799.1| Flagellar basal-body rod protein [Bacillus cereus Rock1-15]
 gi|229127069|ref|ZP_04256068.1| Flagellar basal-body rod protein [Bacillus cereus BDRD-Cer4]
 gi|229144355|ref|ZP_04272761.1| Flagellar basal-body rod protein [Bacillus cereus BDRD-ST24]
 gi|228639142|gb|EEK95566.1| Flagellar basal-body rod protein [Bacillus cereus BDRD-ST24]
 gi|228656422|gb|EEL12261.1| Flagellar basal-body rod protein [Bacillus cereus BDRD-Cer4]
 gi|228674210|gb|EEL29455.1| Flagellar basal-body rod protein [Bacillus cereus Rock1-15]
 gi|228725875|gb|EEL77122.1| Flagellar basal-body rod protein [Bacillus cereus AH676]
 gi|228807655|gb|EEM54179.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
          kurstaki str. T03a001]
          Length = 147

 Score = 41.0 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 29/72 (40%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
             L  + +TV+ N++N +T G++   V F+E +           + + S  +       
Sbjct: 24 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNEM 83

Query: 72 SFISTGTELDFA 83
             +  T+  +A
Sbjct: 84 HLPTVNTKNTYA 95


>gi|229149945|ref|ZP_04278173.1| Flagellar basal-body rod protein [Bacillus cereus m1550]
 gi|228633626|gb|EEK90227.1| Flagellar basal-body rod protein [Bacillus cereus m1550]
          Length = 147

 Score = 41.0 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 29/72 (40%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
             L  + +TV+ N++N +T G++   V F+E +           + + S  +       
Sbjct: 24 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNEM 83

Query: 72 SFISTGTELDFA 83
             +  T+  +A
Sbjct: 84 HLPTVNTKNTYA 95


>gi|218549190|ref|YP_002382981.1| flagellar hook-associated protein FlgK [Escherichia fergusonii
          ATCC 35469]
 gi|218356731|emb|CAQ89359.1| flagellar hook-filament junction protein 1 [Escherichia
          fergusonii ATCC 35469]
          Length = 548

 Score = 41.0 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLSAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|90415312|ref|ZP_01223246.1| flagellar protein [marine gamma proteobacterium HTCC2207]
 gi|90332635|gb|EAS47805.1| flagellar protein [marine gamma proteobacterium HTCC2207]
          Length = 1001

 Score = 41.0 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 26/52 (50%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M    +IG  A     Q LSTV++N++N +T G+     + SE   + +  +
Sbjct: 1  MADILSIGAGATQLYRQALSTVSNNIANLNTEGYSRQVSETSENAPSQQGTV 52


>gi|188492642|ref|ZP_02999912.1| flagellar hook-associated protein FlgK [Escherichia coli 53638]
 gi|188487841|gb|EDU62944.1| flagellar hook-associated protein FlgK [Escherichia coli 53638]
          Length = 458

 Score = 41.0 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 23/78 (29%), Gaps = 2/78 (2%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M    NIG +     +  L+  A N +N  T G+     + S + GA     +   + V 
Sbjct: 1  MD-MINIGYSGASTAQVELNVTAQNTANAMTTGYTRQVAEISTI-GASGGSPNSAGNGVQ 58

Query: 61 SGKEYLSKEVGSFISTGT 78
                            
Sbjct: 59 VDSIRRVSNQYQVNQVWY 76


>gi|324113877|gb|EGC07851.1| flagellar hook protein FlgK [Escherichia fergusonii B253]
          Length = 548

 Score = 41.0 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLSAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|323175237|gb|EFZ60850.1| flagellar hook-associated protein FlgK [Escherichia coli LT-68]
          Length = 547

 Score = 41.0 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|308173580|ref|YP_003920285.1| flagellar component of cell-proximal portion of basal-body rod
          [Bacillus amyloliquefaciens DSM 7]
 gi|307606444|emb|CBI42815.1| flagellar component of cell-proximal portion of basal-body rod
          [Bacillus amyloliquefaciens DSM 7]
 gi|328911721|gb|AEB63317.1| flagellar component of cell-proximal portion of basal-body rod
          [Bacillus amyloliquefaciens LL3]
          Length = 129

 Score = 41.0 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 7/35 (20%), Positives = 19/35 (54%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          +   + +N++N DT  ++  KV F  ++    +++
Sbjct: 21 KQKVITNNIANIDTPNYKAKKVSFRNLLDQETSNL 55


>gi|300918686|ref|ZP_07135266.1| flagellar hook-associated protein FlgK [Escherichia coli MS
          115-1]
 gi|300414160|gb|EFJ97470.1| flagellar hook-associated protein FlgK [Escherichia coli MS
          115-1]
          Length = 547

 Score = 41.0 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|291484169|dbj|BAI85244.1| flagellar basal body rod protein FlgB [Bacillus subtilis subsp.
          natto BEST195]
          Length = 129

 Score = 41.0 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 20/43 (46%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
           A    + +   + +N++N DT  ++  KV F  ++    + +
Sbjct: 13 NALSRADIKQKVITNNIANIDTPNYKAKKVSFQNLLDQESSRL 55


>gi|291282102|ref|YP_003498920.1| Flagellar hook-associated protein FlgK [Escherichia coli O55:H7
          str. CB9615]
 gi|290761975|gb|ADD55936.1| Flagellar hook-associated protein FlgK [Escherichia coli O55:H7
          str. CB9615]
          Length = 547

 Score = 41.0 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|258622485|ref|ZP_05717507.1| Flagellar basal-body rod protein flgB [Vibrio mimicus VM573]
 gi|258625237|ref|ZP_05720149.1| Flagellar basal-body rod protein flgB [Vibrio mimicus VM603]
 gi|262173351|ref|ZP_06041028.1| flagellar basal-body rod protein FlgB [Vibrio mimicus MB-451]
 gi|258582484|gb|EEW07321.1| Flagellar basal-body rod protein flgB [Vibrio mimicus VM603]
 gi|258585185|gb|EEW09912.1| Flagellar basal-body rod protein flgB [Vibrio mimicus VM573]
 gi|261890709|gb|EEY36696.1| flagellar basal-body rod protein FlgB [Vibrio mimicus MB-451]
          Length = 120

 Score = 41.0 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 26/85 (30%), Gaps = 1/85 (1%)

Query: 17  QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76
           QR   +A N++N DT G+    + F+ V+    +             E            
Sbjct: 21  QRTKVLASNLANVDTPGYLAKDLSFTTVMNQTGSGS-VHEPVPKFQVETKYSVPYQNSKD 79

Query: 77  GTELDFALEGDAWFALESPRGIILT 101
           G   +  +E   +          LT
Sbjct: 80  GNTAELGIEQAKFTQNNMDFQTSLT 104


>gi|228938857|ref|ZP_04101457.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
          berliner ATCC 10792]
 gi|228971738|ref|ZP_04132359.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
          thuringiensis str. T01001]
 gi|228978347|ref|ZP_04138724.1| Flagellar basal-body rod protein [Bacillus thuringiensis Bt407]
 gi|228781364|gb|EEM29565.1| Flagellar basal-body rod protein [Bacillus thuringiensis Bt407]
 gi|228787828|gb|EEM35786.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
          thuringiensis str. T01001]
 gi|228820706|gb|EEM66731.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
          berliner ATCC 10792]
          Length = 147

 Score = 41.0 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 29/72 (40%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
             L  + +TV+ N++N +T G++   V F+E +           + + S  +       
Sbjct: 24 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNEM 83

Query: 72 SFISTGTELDFA 83
             +  T+  +A
Sbjct: 84 HLPTVNTKNTYA 95


>gi|261339382|ref|ZP_05967240.1| flagellar hook-associated protein FlgK [Enterobacter cancerogenus
          ATCC 35316]
 gi|288318183|gb|EFC57121.1| flagellar hook-associated protein FlgK [Enterobacter cancerogenus
          ATCC 35316]
          Length = 547

 Score = 41.0 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 9/52 (17%), Positives = 21/52 (40%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+TV++N+S+ +  G+             +    
Sbjct: 1  MSSLINSAMSGLSAAQAALNTVSNNISSYNVAGYTRQTTILGASNSTLTGGG 52


>gi|163738040|ref|ZP_02145456.1| Flagellar hook-associated protein [Phaeobacter gallaeciensis
          BS107]
 gi|161388656|gb|EDQ13009.1| Flagellar hook-associated protein [Phaeobacter gallaeciensis
          BS107]
          Length = 482

 Score = 41.0 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 31/93 (33%), Gaps = 5/93 (5%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
          ++ N  +    A  +  S V++N+SN  T G+         +      D    +      
Sbjct: 5  SALNSAMTGLTAAGRSTSVVSENLSNVLTPGYSR-----RSLALTSAGDGFSGVKVGHVQ 59

Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESP 95
          +        S  S  +E+  A    A+F   + 
Sbjct: 60 RINDPALQSSVRSANSEVGVAEVKSAFFGRMTE 92



 Score = 40.2 bits (92), Expect = 0.23,   Method: Composition-based stats.
 Identities = 20/175 (11%), Positives = 53/175 (30%), Gaps = 3/175 (1%)

Query: 67  SKEVGSFISTGTELDFALEGDA--WFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVL 124
             +  +   T T  D  +  D   +F   +  GI    +   K+   G   +   +  + 
Sbjct: 308 RFQDPALDPTLTATDPGIFTDQGAFFDPANTVGIANRIELNDKIAMQGQAETWRLRDGLN 367

Query: 125 DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT 184
             +            +      + +     + T  L +  +S   + R     +      
Sbjct: 368 AASPGNAGDATLLRGYADALDAKRTVSSVGLGTANLDASTLSANLLSRFAQSENSAEQNV 427

Query: 185 PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
                +   + +  L     +S  E+  +I + + + +   +I   ++ M   +R
Sbjct: 428 AFAAATYTEMYQRELAQG-VDSDAELQNLIVIEKVYQANARMISVVDELMETLLR 481


>gi|331645424|ref|ZP_08346528.1| flagellar hook-associated protein FlgK [Escherichia coli M605]
 gi|59889786|emb|CAH19142.1| Lateral flagellar hook associated protein 1 (FlgK-like)
          [Escherichia coli]
 gi|284920050|emb|CBG33107.1| lateral flagellar hook associated protein 1 (FlgK-like)
          [Escherichia coli 042]
 gi|331045586|gb|EGI17712.1| flagellar hook-associated protein FlgK [Escherichia coli M605]
          Length = 458

 Score = 41.0 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 23/78 (29%), Gaps = 2/78 (2%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M    NIG +     +  L+  A N +N  T G+     + S + GA     +   + V 
Sbjct: 1  MD-MINIGYSGASTAQVELNVTAQNTANAMTTGYTRQVAEISTI-GASGGSPNSAGNGVQ 58

Query: 61 SGKEYLSKEVGSFISTGT 78
                            
Sbjct: 59 VDSIRRVSNQYQVNQVWY 76


>gi|194432475|ref|ZP_03064762.1| flagellar hook-associated protein FlgK [Shigella dysenteriae
          1012]
 gi|194419362|gb|EDX35444.1| flagellar hook-associated protein FlgK [Shigella dysenteriae
          1012]
 gi|332092937|gb|EGI98005.1| flagellar hook-associated protein FlgK [Shigella dysenteriae
          155-74]
          Length = 547

 Score = 41.0 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|330447901|ref|ZP_08311549.1| flagellar basal-body rod protein FlgC [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
 gi|328492092|dbj|GAA06046.1| flagellar basal-body rod protein FlgC [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
          Length = 144

 Score = 41.0 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 19/43 (44%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   + + + EM  M+  T+ F +   ++   +      +R
Sbjct: 97  GYVYYPDIDVVAEMADMMSATRSFETNVEVLSNVKSMQQGLLR 139



 Score = 35.2 bits (79), Expect = 7.8,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 6/71 (8%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          I  +A  A   RL+TVA N++N D V       ++ +K  F+ V G  +   +Q     A
Sbjct: 9  IAGSAMNAQTIRLNTVASNLANADAVAANPDDAYQALKPVFATVYGKTQLTGEQANYPSA 68

Query: 61 SGKEYLSKEVG 71
            +     +  
Sbjct: 69 EVRIMDVVQHA 79


>gi|320179217|gb|EFW54175.1| Flagellar hook-associated protein FlgK [Shigella boydii ATCC
          9905]
 gi|332089154|gb|EGI94263.1| flagellar hook-associated protein FlgK [Shigella boydii 5216-82]
          Length = 547

 Score = 41.0 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|315618252|gb|EFU98842.1| flagellar hook-associated protein FlgK [Escherichia coli 3431]
          Length = 547

 Score = 41.0 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|331682584|ref|ZP_08383203.1| flagellar hook-associated protein FlgK [Escherichia coli H299]
 gi|331080215|gb|EGI51394.1| flagellar hook-associated protein FlgK [Escherichia coli H299]
          Length = 547

 Score = 41.0 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|293433372|ref|ZP_06661800.1| flagellar hook-associated protein FlgK [Escherichia coli B088]
 gi|291324191|gb|EFE63613.1| flagellar hook-associated protein FlgK [Escherichia coli B088]
          Length = 547

 Score = 41.0 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|218694616|ref|YP_002402283.1| flagellar hook-associated protein FlgK [Escherichia coli 55989]
 gi|307310140|ref|ZP_07589790.1| flagellar hook-associated protein FlgK [Escherichia coli W]
 gi|218351348|emb|CAU97054.1| flagellar hook-filament junction protein 1 [Escherichia coli
          55989]
 gi|306909858|gb|EFN40352.1| flagellar hook-associated protein FlgK [Escherichia coli W]
 gi|315060360|gb|ADT74687.1| flagellar hook-filament junction protein 1 [Escherichia coli W]
 gi|320200978|gb|EFW75562.1| Flagellar hook-associated protein FlgK [Escherichia coli EC4100B]
 gi|323379079|gb|ADX51347.1| flagellar hook-associated protein FlgK [Escherichia coli KO11]
          Length = 547

 Score = 41.0 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|118589984|ref|ZP_01547388.1| flagellar basal-body rod protein B [Stappia aggregata IAM 12614]
 gi|118437481|gb|EAV44118.1| flagellar basal-body rod protein B [Stappia aggregata IAM 12614]
          Length = 126

 Score = 41.0 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 30/67 (44%), Gaps = 1/67 (1%)

Query: 15 LEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIKNDIDQKISFVASGKEYLSKEVGSF 73
          L  R +T+A+N++N +T GFR+  ++ F+ V+   +  +              +++    
Sbjct: 17 LSVRQATIAENIANANTPGFRSKDLEPFTTVISRTQLAMTATHDGHLGQTMEAARKSDVE 76

Query: 74 ISTGTEL 80
           +    +
Sbjct: 77 KADSWTV 83


>gi|91792661|ref|YP_562312.1| flagellar basal body rod protein FlgB [Shewanella denitrificans
          OS217]
 gi|91714663|gb|ABE54589.1| flagellar basal-body rod protein FlgB [Shewanella denitrificans
          OS217]
          Length = 132

 Score = 41.0 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 9/59 (15%), Positives = 23/59 (38%)

Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFI 74
           QR   ++ N++N +T  ++   V F+  + + ++          S K +    +    
Sbjct: 20 SQRAEVLSSNIANANTPHYKAQDVDFASAMQSARSHQKGLSMSNTSEKHFDLTSLTQQH 78


>gi|82544453|ref|YP_408400.1| flagellar hook-associated protein FlgK [Shigella boydii Sb227]
 gi|81245864|gb|ABB66572.1| hook-filament junction protein 1 [Shigella boydii Sb227]
 gi|320173535|gb|EFW48731.1| Flagellar hook-associated protein FlgK [Shigella dysenteriae CDC
          74-1112]
 gi|332094064|gb|EGI99116.1| flagellar hook-associated protein FlgK [Shigella boydii 3594-74]
          Length = 547

 Score = 41.0 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|148546713|ref|YP_001266815.1| flagellar hook-associated protein FlgK [Pseudomonas putida F1]
 gi|148510771|gb|ABQ77631.1| flagellar hook-associated protein FlgK [Pseudomonas putida F1]
          Length = 676

 Score = 41.0 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 17/133 (12%), Positives = 37/133 (27%), Gaps = 1/133 (0%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M +  NIG++   A +  + T+ +N++N D   +   +       G     +    S   
Sbjct: 1   MASLINIGMSGLGAAQSGMYTLGNNIANADVESYSRQQNVQKTKGGQQVGQVF-IGSGTT 59

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
                            T    + E  ++    +P    L+           S  ++   
Sbjct: 60  LADVRRVYNAFIENQLRTTTSLSSEASSYLDQITPLDTSLSSSDTGITAALQSFFTSMQD 119

Query: 121 YPVLDMASVPIQI 133
                      Q+
Sbjct: 120 AAAKPTEDASRQL 132


>gi|260222464|emb|CBA32054.1| Flagellar basal-body rod protein flgB [Curvibacter putative
           symbiont of Hydra magnipapillata]
          Length = 166

 Score = 41.0 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 13/104 (12%), Positives = 31/104 (29%), Gaps = 4/104 (3%)

Query: 1   MQTSFNIGLA----AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56
           M ++    L       +   +R   +A N++N DT G+      F + +    +     +
Sbjct: 21  MFSNLTNALDFQSKGLVLRAERQRVIASNIANADTPGYSGRDFDFKKAMAEATSGPTIAL 80

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL 100
           +  +SG           I        ++  +            +
Sbjct: 81  APPSSGTPADGTTNNRHIPLTPIEGSSIGDNNKLGYTIQTQPAM 124


>gi|256018661|ref|ZP_05432526.1| flagellar hook-associated protein FlgK [Shigella sp. D9]
 gi|332279730|ref|ZP_08392143.1| flagellar hook-filament junction protein 1 [Shigella sp. D9]
 gi|323185795|gb|EFZ71156.1| flagellar hook-associated protein FlgK [Escherichia coli 1357]
 gi|324117347|gb|EGC11254.1| flagellar hook protein FlgK [Escherichia coli E1167]
 gi|332102082|gb|EGJ05428.1| flagellar hook-filament junction protein 1 [Shigella sp. D9]
          Length = 547

 Score = 41.0 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|315296713|gb|EFU56008.1| flagellar hook-associated protein FlgK [Escherichia coli MS 16-3]
          Length = 547

 Score = 41.0 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|296534169|ref|ZP_06896661.1| flagellar hook-associated protein FlgK [Roseomonas cervicalis
          ATCC 49957]
 gi|296265505|gb|EFH11638.1| flagellar hook-associated protein FlgK [Roseomonas cervicalis
          ATCC 49957]
          Length = 500

 Score = 41.0 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 17/42 (40%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44
          ++     +      ++L   A N++N DT G+    V    V
Sbjct: 5  SALLTATSGLRLTTRQLEQSAQNIANADTAGYTRKTVSGEAV 46


>gi|256020234|ref|ZP_05434099.1| flagellar hook-associated protein FlgK [Shigella sp. D9]
 gi|300817263|ref|ZP_07097481.1| flagellar hook-associated protein FlgK [Escherichia coli MS
          107-1]
 gi|332281396|ref|ZP_08393809.1| lateral flagellar hook associated protein 1 [Shigella sp. D9]
 gi|300530239|gb|EFK51301.1| flagellar hook-associated protein FlgK [Escherichia coli MS
          107-1]
 gi|332103748|gb|EGJ07094.1| lateral flagellar hook associated protein 1 [Shigella sp. D9]
          Length = 458

 Score = 41.0 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 23/78 (29%), Gaps = 2/78 (2%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M    NIG +     +  L+  A N +N  T G+     + S + GA     +   + V 
Sbjct: 1  MD-MINIGYSGASTAQVELNVTAQNTANAMTTGYTRQVAEISTI-GASGGSPNSAGNGVQ 58

Query: 61 SGKEYLSKEVGSFISTGT 78
                            
Sbjct: 59 VDSIRRVSNQYQVNQVWY 76


>gi|194014328|ref|ZP_03052945.1| flagellar basal-body rod protein FlgB [Bacillus pumilus ATCC
          7061]
 gi|194013354|gb|EDW22919.1| flagellar basal-body rod protein FlgB [Bacillus pumilus ATCC
          7061]
          Length = 131

 Score = 41.0 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 19/36 (52%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV 45
           A      +   +++N++N DT  +++  V F +++
Sbjct: 15 NALGRANVKQKVISNNIANIDTPNYKSKNVAFHDML 50


>gi|170683657|ref|YP_001744098.1| flagellar hook-associated protein FlgK [Escherichia coli SMS-3-5]
 gi|170521375|gb|ACB19553.1| flagellar hook-associated protein FlgK [Escherichia coli SMS-3-5]
          Length = 547

 Score = 41.0 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|91210234|ref|YP_540220.1| flagellar hook-associated protein FlgK [Escherichia coli UTI89]
 gi|117623268|ref|YP_852181.1| flagellar hook-associated protein FlgK [Escherichia coli APEC O1]
 gi|218557964|ref|YP_002390877.1| flagellar hook-associated protein FlgK [Escherichia coli S88]
 gi|237706932|ref|ZP_04537413.1| hook-filament junction protein FlgK [Escherichia sp. 3_2_53FAA]
 gi|306814069|ref|ZP_07448242.1| flagellar hook-associated protein FlgK [Escherichia coli NC101]
 gi|91071808|gb|ABE06689.1| hook-filament junction protein 1 [Escherichia coli UTI89]
 gi|115512392|gb|ABJ00467.1| hook-filament junction protein FlgK [Escherichia coli APEC O1]
 gi|218364733|emb|CAR02423.1| flagellar hook-filament junction protein 1 [Escherichia coli S88]
 gi|226898142|gb|EEH84401.1| hook-filament junction protein FlgK [Escherichia sp. 3_2_53FAA]
 gi|294491481|gb|ADE90237.1| flagellar hook-associated protein FlgK [Escherichia coli IHE3034]
 gi|305852706|gb|EFM53154.1| flagellar hook-associated protein FlgK [Escherichia coli NC101]
 gi|307627448|gb|ADN71752.1| flagellar hook-associated protein FlgK [Escherichia coli UM146]
 gi|315287426|gb|EFU46837.1| flagellar hook-associated protein FlgK [Escherichia coli MS
          110-3]
 gi|323953232|gb|EGB49098.1| flagellar hook protein FlgK [Escherichia coli H252]
 gi|323957906|gb|EGB53618.1| flagellar hook protein FlgK [Escherichia coli H263]
          Length = 547

 Score = 41.0 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|51246505|ref|YP_066389.1| flagellar basal-body rod protein (FlgB) [Desulfotalea
          psychrophila LSv54]
 gi|50877542|emb|CAG37382.1| related to flagellar basal-body rod protein (FlgB) [Desulfotalea
          psychrophila LSv54]
          Length = 137

 Score = 41.0 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 6/26 (23%), Positives = 14/26 (53%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSE 43
          +   ++ N++N +T G+   +  F E
Sbjct: 24 KQEVISSNIANAETPGYAARRFNFEE 49


>gi|27363708|ref|NP_759236.1| flagellar basal body rod protein FlgB [Vibrio vulnificus CMCP6]
 gi|37679144|ref|NP_933753.1| flagellar basal body rod protein FlgB [Vibrio vulnificus YJ016]
 gi|320157112|ref|YP_004189491.1| flagellar basal-body rod protein FlgB [Vibrio vulnificus
          MO6-24/O]
 gi|27359824|gb|AAO08763.1| flagellar basal-body rod protein FlgB [Vibrio vulnificus CMCP6]
 gi|37197886|dbj|BAC93724.1| flagellar basal body protein FlgB [Vibrio vulnificus YJ016]
 gi|319932424|gb|ADV87288.1| flagellar basal-body rod protein FlgB [Vibrio vulnificus
          MO6-24/O]
          Length = 131

 Score = 41.0 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 7/38 (18%), Positives = 19/38 (50%)

Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
          E+    ++ N++  +T G++   + FS+ + A  +   
Sbjct: 20 ERNAEVISTNIAQANTPGYKARGLDFSKELQAASSGAS 57


>gi|16078681|ref|NP_389500.1| flagellar basal body rod protein FlgB [Bacillus subtilis subsp.
          subtilis str. 168]
 gi|221309493|ref|ZP_03591340.1| flagellar basal body rod protein FlgB [Bacillus subtilis subsp.
          subtilis str. 168]
 gi|221313818|ref|ZP_03595623.1| flagellar basal body rod protein FlgB [Bacillus subtilis subsp.
          subtilis str. NCIB 3610]
 gi|221318742|ref|ZP_03600036.1| flagellar basal body rod protein FlgB [Bacillus subtilis subsp.
          subtilis str. JH642]
 gi|221323013|ref|ZP_03604307.1| flagellar basal body rod protein FlgB [Bacillus subtilis subsp.
          subtilis str. SMY]
 gi|120292|sp|P24500|FLGB_BACSU RecName: Full=Flagellar basal-body rod protein flgB
 gi|142915|gb|AAA22441.1| flgB [Bacillus subtilis]
 gi|2633990|emb|CAB13491.1| flagellar component of cell-proximal portion of basal-body rod
          [Bacillus subtilis subsp. subtilis str. 168]
          Length = 129

 Score = 41.0 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 20/43 (46%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
           A    + +   + +N++N DT  ++  KV F  ++    + +
Sbjct: 13 NALSRADIKQKVITNNIANIDTPNYKAKKVSFQNLLDQESSRL 55


>gi|157159090|ref|YP_001462316.1| flagellar hook-associated protein FlgK [Escherichia coli E24377A]
 gi|209918336|ref|YP_002292420.1| flagellar hook-associated protein FlgK [Escherichia coli SE11]
 gi|218553660|ref|YP_002386573.1| flagellar hook-associated protein FlgK [Escherichia coli IAI1]
 gi|300821137|ref|ZP_07101286.1| flagellar hook-associated protein FlgK [Escherichia coli MS
          119-7]
 gi|331676873|ref|ZP_08377569.1| flagellar hook-associated protein FlgK [Escherichia coli H591]
 gi|157081120|gb|ABV20828.1| flagellar hook-associated protein FlgK [Escherichia coli E24377A]
 gi|209911595|dbj|BAG76669.1| flagellar hook-filament junction protein 1 FlgK [Escherichia coli
          SE11]
 gi|218360428|emb|CAQ97982.1| flagellar hook-filament junction protein 1 [Escherichia coli
          IAI1]
 gi|300526436|gb|EFK47505.1| flagellar hook-associated protein FlgK [Escherichia coli MS
          119-7]
 gi|323947616|gb|EGB43620.1| flagellar hook-associated protein FlgK [Escherichia coli H120]
 gi|324017414|gb|EGB86633.1| flagellar hook-associated protein FlgK [Escherichia coli MS
          117-3]
 gi|331075562|gb|EGI46860.1| flagellar hook-associated protein FlgK [Escherichia coli H591]
          Length = 547

 Score = 41.0 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|16129045|ref|NP_415600.1| flagellar hook-filament junction protein 1 [Escherichia coli str.
          K-12 substr. MG1655]
 gi|89107928|ref|AP_001708.1| flagellar hook-filament junction protein 1 [Escherichia coli str.
          K-12 substr. W3110]
 gi|170080733|ref|YP_001730053.1| flagellar hook-filament junction protein 1 [Escherichia coli str.
          K-12 substr. DH10B]
 gi|238900336|ref|YP_002926132.1| flagellar hook-filament junction protein 1 [Escherichia coli
          BW2952]
 gi|256023220|ref|ZP_05437085.1| flagellar hook-associated protein FlgK [Escherichia sp. 4_1_40B]
 gi|307137717|ref|ZP_07497073.1| flagellar hook-associated protein FlgK [Escherichia coli H736]
 gi|331641626|ref|ZP_08342761.1| flagellar hook-associated protein FlgK [Escherichia coli H736]
 gi|2506419|sp|P33235|FLGK_ECOLI RecName: Full=Flagellar hook-associated protein 1; Short=HAP1
 gi|1651528|dbj|BAA35891.1| flagellar hook-filament junction protein 1 [Escherichia coli str.
          K12 substr. W3110]
 gi|1787323|gb|AAC74166.1| flagellar hook-filament junction protein 1 [Escherichia coli str.
          K-12 substr. MG1655]
 gi|169888568|gb|ACB02275.1| flagellar hook-filament junction protein 1 [Escherichia coli str.
          K-12 substr. DH10B]
 gi|238861110|gb|ACR63108.1| flagellar hook-filament junction protein 1 [Escherichia coli
          BW2952]
 gi|260449778|gb|ACX40200.1| flagellar hook-associated protein FlgK [Escherichia coli DH1]
 gi|315135714|dbj|BAJ42873.1| flagellar hook-associated protein FlgK [Escherichia coli DH1]
 gi|323937822|gb|EGB34086.1| flagellar hook-associated protein FlgK [Escherichia coli E1520]
 gi|331038424|gb|EGI10644.1| flagellar hook-associated protein FlgK [Escherichia coli H736]
          Length = 547

 Score = 41.0 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|308050375|ref|YP_003913941.1| flagellar basal-body rod protein FlgB [Ferrimonas balearica DSM
          9799]
 gi|307632565|gb|ADN76867.1| flagellar basal-body rod protein FlgB [Ferrimonas balearica DSM
          9799]
          Length = 131

 Score = 41.0 bits (94), Expect = 0.14,   Method: Composition-based stats.
 Identities = 7/34 (20%), Positives = 17/34 (50%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51
          R   ++ N++N DT  ++   + F + +   K+ 
Sbjct: 22 RAEVLSSNIANADTPNYKAQDLDFEQALAGAKSR 55


>gi|312115251|ref|YP_004012847.1| flagellar basal-body rod protein FlgC [Rhodomicrobium vannielii
           ATCC 17100]
 gi|311220380|gb|ADP71748.1| flagellar basal-body rod protein FlgC [Rhodomicrobium vannielii
           ATCC 17100]
          Length = 139

 Score = 41.0 bits (94), Expect = 0.14,   Method: Composition-based stats.
 Identities = 15/109 (13%), Positives = 34/109 (31%), Gaps = 11/109 (10%)

Query: 1   MQT---SFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKF-SEVVGAIK 49
           M     S  I  +   A  QR+    +N++N+++ G       +    + F  E+  A  
Sbjct: 3   MDNLSASLAIAGSGLSAQSQRIRVATENLANSESTGKTPGALPYTRKILSFDQELDAATG 62

Query: 50  NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98
            ++       A    Y  + +    +   + +  L         +    
Sbjct: 63  AELVIIGDVDADRSPYRIENIPGHPAADAQGNVKLPNVNVLVELADIRE 111



 Score = 36.0 bits (81), Expect = 4.1,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 22/54 (40%), Gaps = 6/54 (11%)

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
               NIP  P  D       +G ++  N N + E+  +   T+ + +   +I +
Sbjct: 78  YRIENIPGHPAADA------QGNVKLPNVNVLVELADIREGTRSYEANLQVIKQ 125


>gi|193064539|ref|ZP_03045619.1| flagellar hook-associated protein FlgK [Escherichia coli E22]
 gi|194428412|ref|ZP_03060952.1| flagellar hook-associated protein FlgK [Escherichia coli B171]
 gi|260843322|ref|YP_003221100.1| flagellar hook-filament junction protein FlgK [Escherichia coli
          O103:H2 str. 12009]
 gi|192927791|gb|EDV82405.1| flagellar hook-associated protein FlgK [Escherichia coli E22]
 gi|194413464|gb|EDX29746.1| flagellar hook-associated protein FlgK [Escherichia coli B171]
 gi|257758469|dbj|BAI29966.1| flagellar hook-filament junction protein FlgK [Escherichia coli
          O103:H2 str. 12009]
          Length = 547

 Score = 41.0 bits (94), Expect = 0.14,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|323171070|gb|EFZ56719.1| flagellar hook-associated protein FlgK [Escherichia coli LT-68]
          Length = 458

 Score = 41.0 bits (94), Expect = 0.14,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 23/78 (29%), Gaps = 2/78 (2%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M    NIG +     +  L+  A N +N  T G+     + S + GA     +   + V 
Sbjct: 1  MD-MINIGYSGASTAQVELNVTAQNTANAMTTGYTRQVAEISTI-GASGGSPNSAGNGVQ 58

Query: 61 SGKEYLSKEVGSFISTGT 78
                            
Sbjct: 59 VDSIRRVSNQYQVNQVWY 76


>gi|309701354|emb|CBJ00655.1| flagellar hook-associated protein 1 [Escherichia coli ETEC
          H10407]
          Length = 547

 Score = 41.0 bits (94), Expect = 0.14,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|229132556|ref|ZP_04261405.1| Flagellar basal-body rod protein [Bacillus cereus BDRD-ST196]
 gi|228650902|gb|EEL06888.1| Flagellar basal-body rod protein [Bacillus cereus BDRD-ST196]
          Length = 161

 Score = 41.0 bits (94), Expect = 0.14,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 20/34 (58%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV 45
             L  + +TV+ N++N +T G++   V F+E +
Sbjct: 38 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQM 71


>gi|42527853|ref|NP_972951.1| flagellar hook-associated protein FlgK [Treponema denticola ATCC
           35405]
 gi|41818681|gb|AAS12870.1| flagellar hook-associated protein FlgK [Treponema denticola ATCC
           35405]
          Length = 623

 Score = 41.0 bits (94), Expect = 0.14,   Method: Composition-based stats.
 Identities = 6/41 (14%), Positives = 14/41 (34%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E+  +I     +N+    +    + +   I  + 
Sbjct: 582 SGVNIDEELSDIIKFQHGYNASARFVSVINEMIDTVINRMG 622



 Score = 36.0 bits (81), Expect = 4.8,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 19/50 (38%), Gaps = 3/50 (6%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDIDQKIS 57
          +  A +Q + T   N+SN+ T G+   +V    F  +        +    
Sbjct: 13 SLFAHQQSIQTAGHNISNSSTKGYTRQRVNLEAFEPIYRPDLTRAETPGQ 62


>gi|26247222|ref|NP_753262.1| flagellar hook-associated protein FlgK [Escherichia coli CFT073]
 gi|227886560|ref|ZP_04004365.1| flagellar hook-associated protein FlgK [Escherichia coli 83972]
 gi|300974386|ref|ZP_07172598.1| flagellar hook-associated protein FlgK [Escherichia coli MS 45-1]
 gi|26107623|gb|AAN79822.1|AE016759_96 Flagellar hook-associated protein 1 [Escherichia coli CFT073]
 gi|227836764|gb|EEJ47230.1| flagellar hook-associated protein FlgK [Escherichia coli 83972]
 gi|300410629|gb|EFJ94167.1| flagellar hook-associated protein FlgK [Escherichia coli MS 45-1]
 gi|307553084|gb|ADN45859.1| flagellar hook-associated protein FlgK [Escherichia coli ABU
          83972]
 gi|315291060|gb|EFU50423.1| flagellar hook-associated protein FlgK [Escherichia coli MS
          153-1]
          Length = 547

 Score = 41.0 bits (94), Expect = 0.14,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|194438121|ref|ZP_03070214.1| flagellar hook-associated protein FlgK [Escherichia coli 101-1]
 gi|253773894|ref|YP_003036725.1| flagellar hook-associated protein FlgK [Escherichia coli
          'BL21-Gold(DE3)pLysS AG']
 gi|254161188|ref|YP_003044296.1| flagellar hook-associated protein FlgK [Escherichia coli B str.
          REL606]
 gi|300928366|ref|ZP_07143900.1| flagellar hook-associated protein FlgK [Escherichia coli MS
          187-1]
 gi|194423057|gb|EDX39051.1| flagellar hook-associated protein FlgK [Escherichia coli 101-1]
 gi|242376886|emb|CAQ31603.1| flagellar biosynthesis, hook-filament junction protein 1, subunit
          of Flagellum [Escherichia coli BL21(DE3)]
 gi|253324938|gb|ACT29540.1| flagellar hook-associated protein FlgK [Escherichia coli
          'BL21-Gold(DE3)pLysS AG']
 gi|253973089|gb|ACT38760.1| flagellar hook-associated protein K [Escherichia coli B str.
          REL606]
 gi|253977303|gb|ACT42973.1| flagellar hook-associated protein K [Escherichia coli BL21(DE3)]
 gi|300463624|gb|EFK27117.1| flagellar hook-associated protein FlgK [Escherichia coli MS
          187-1]
 gi|323962681|gb|EGB58259.1| flagellar hook protein FlgK [Escherichia coli H489]
 gi|323973329|gb|EGB68518.1| flagellar hook protein FlgK [Escherichia coli TA007]
 gi|332342628|gb|AEE55962.1| flagellar hook-associated protein FlgK [Escherichia coli UMNK88]
          Length = 547

 Score = 41.0 bits (94), Expect = 0.14,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|258625283|ref|ZP_05720191.1| flagellar hook-associated protein 1 [Vibrio mimicus VM603]
 gi|258582456|gb|EEW07297.1| flagellar hook-associated protein 1 [Vibrio mimicus VM603]
          Length = 624

 Score = 41.0 bits (94), Expect = 0.14,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 28/84 (33%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
           N+G  + L  +++L+T   N+SN +T G+    V     +          +        
Sbjct: 6  LNVGTQSVLTAQRQLNTTGHNISNVNTEGYSRQSVIQGTNMPRQYGGETYGMGVHVENVR 65

Query: 65 YLSKEVGSFISTGTELDFALEGDA 88
              +           D++ + D 
Sbjct: 66 RSWDQFAVKELNIASTDYSFKRDT 89



 Score = 37.2 bits (84), Expect = 2.3,   Method: Composition-based stats.
 Identities = 6/37 (16%), Positives = 14/37 (37%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N   E   M+   Q + + + +I  +  +    +
Sbjct: 585 SGVNLDEEAANMMKFQQAYMASSRIIQASNDTFNTIL 621


>gi|120613056|ref|YP_972734.1| flagellar basal-body rod protein FlgB [Acidovorax citrulli
          AAC00-1]
 gi|120591520|gb|ABM34960.1| flagellar basal-body rod protein FlgB [Acidovorax citrulli
          AAC00-1]
          Length = 147

 Score = 41.0 bits (94), Expect = 0.14,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 18/43 (41%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
           A +   +R   +A N++N DT G+      F++ +       
Sbjct: 14 NALMLRAERQRAIASNIANADTPGYVARDFNFADALRDATGQG 56


>gi|258621055|ref|ZP_05716089.1| flagellar hook-associated protein 1 [Vibrio mimicus VM573]
 gi|262166276|ref|ZP_06034013.1| flagellar hook-associated protein FlgK [Vibrio mimicus VM223]
 gi|262170831|ref|ZP_06038509.1| flagellar hook-associated protein FlgK [Vibrio mimicus MB-451]
 gi|258586443|gb|EEW11158.1| flagellar hook-associated protein 1 [Vibrio mimicus VM573]
 gi|261891907|gb|EEY37893.1| flagellar hook-associated protein FlgK [Vibrio mimicus MB-451]
 gi|262025992|gb|EEY44660.1| flagellar hook-associated protein FlgK [Vibrio mimicus VM223]
          Length = 624

 Score = 41.0 bits (94), Expect = 0.14,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 28/84 (33%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
           N+G  + L  +++L+T   N+SN +T G+    V     +          +        
Sbjct: 6  LNVGTQSVLTAQRQLNTTGHNISNVNTEGYSRQSVIQGTNMPRQYGGETYGMGVHVENVR 65

Query: 65 YLSKEVGSFISTGTELDFALEGDA 88
              +           D++ + D 
Sbjct: 66 RSWDQFAVKELNIASTDYSFKRDT 89



 Score = 37.2 bits (84), Expect = 2.2,   Method: Composition-based stats.
 Identities = 6/37 (16%), Positives = 14/37 (37%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N   E   M+   Q + + + +I  +  +    +
Sbjct: 585 SGVNLDEEAANMMKFQQAYMASSRIIQASNDTFNTIL 621


>gi|145298497|ref|YP_001141338.1| flagellar hook-associated protein FlgK [Aeromonas salmonicida
          subsp. salmonicida A449]
 gi|142851269|gb|ABO89590.1| flagellar hook-associated protein FlgK [Aeromonas salmonicida
          subsp. salmonicida A449]
          Length = 666

 Score = 41.0 bits (94), Expect = 0.14,   Method: Composition-based stats.
 Identities = 9/35 (25%), Positives = 19/35 (54%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39
            IG +  LA ++ L T ++N+ N ++ G+   + 
Sbjct: 6  LGIGTSGVLAQQRLLQTTSNNIVNVNSQGYVRERT 40


>gi|300938647|ref|ZP_07153376.1| flagellar hook-associated protein FlgK [Escherichia coli MS 21-1]
 gi|300456432|gb|EFK19925.1| flagellar hook-associated protein FlgK [Escherichia coli MS 21-1]
          Length = 547

 Score = 41.0 bits (94), Expect = 0.14,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|300902473|ref|ZP_07120455.1| flagellar hook-associated protein FlgK [Escherichia coli MS 84-1]
 gi|301304979|ref|ZP_07211081.1| flagellar hook-associated protein FlgK [Escherichia coli MS
          124-1]
 gi|300405505|gb|EFJ89043.1| flagellar hook-associated protein FlgK [Escherichia coli MS 84-1]
 gi|300839697|gb|EFK67457.1| flagellar hook-associated protein FlgK [Escherichia coli MS
          124-1]
 gi|315253883|gb|EFU33851.1| flagellar hook-associated protein FlgK [Escherichia coli MS 85-1]
          Length = 547

 Score = 41.0 bits (94), Expect = 0.14,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|254464939|ref|ZP_05078350.1| flagellar hook-associated protein FlgK [Rhodobacterales bacterium
          Y4I]
 gi|206685847|gb|EDZ46329.1| flagellar hook-associated protein FlgK [Rhodobacterales bacterium
          Y4I]
          Length = 482

 Score = 41.0 bits (94), Expect = 0.14,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 16/32 (50%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGF 34
          ++ N  +    A  +    VA+N++N  T G+
Sbjct: 5  SALNSAMTGLSAAGRSSQVVAENLANALTPGY 36



 Score = 35.2 bits (79), Expect = 8.4,   Method: Composition-based stats.
 Identities = 24/201 (11%), Positives = 61/201 (30%), Gaps = 11/201 (5%)

Query: 39  VKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98
           V+  E + A+  D+ ++    +        + G F   G+  D A        +E    +
Sbjct: 292 VEAQEDLDAMAADLIERFQDPSLDATIGVTDAGIFTDDGSFYDPANIVGLSNRIELNDLL 351

Query: 99  ILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158
            L R G      DG   +A G      +              +    G  +     ++  
Sbjct: 352 ALDRAGETWRFRDGLYAAAPGDPGDSSLLQAYSDALNTTRTVSSVGLGTANMTAATLSAN 411

Query: 159 GLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218
            L           R ++  + +       +L+              ++  E+  ++ + +
Sbjct: 412 LLSRFAQDNETAARASTFAATSFNELSQAELALG-----------VDTDAELQNLMLVEK 460

Query: 219 KFNSITTLIDENEKSMLEAIR 239
            + +   ++   ++ M   +R
Sbjct: 461 YYAANARMLSVVDELMETLLR 481


>gi|194365683|ref|YP_002028293.1| flagellar basal body rod protein FlgB [Stenotrophomonas
          maltophilia R551-3]
 gi|194348487|gb|ACF51610.1| flagellar basal-body rod protein FlgB [Stenotrophomonas
          maltophilia R551-3]
          Length = 131

 Score = 41.0 bits (94), Expect = 0.14,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 23/55 (41%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65
          A    EQR+  +A N+ N DT G++   + F   +   +      +    + + Y
Sbjct: 15 AMPLREQRMKLIASNLGNADTPGYKAQDLDFDAALRHAQGQDANGLMTTTNEQHY 69


>gi|85706143|ref|ZP_01037238.1| flagellar hook-associated protein [Roseovarius sp. 217]
 gi|85669307|gb|EAQ24173.1| flagellar hook-associated protein [Roseovarius sp. 217]
          Length = 459

 Score = 41.0 bits (94), Expect = 0.14,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query: 199 LEDSN-ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           LE +N  +S  E+ +++ + Q F +   +I   +  +   +R
Sbjct: 417 LELANGVDSDAELQRLLLVEQAFGANARMIQTIDDMLDTLLR 458


>gi|323163692|gb|EFZ49513.1| flagellar hook-associated protein FlgK [Escherichia coli E128010]
          Length = 547

 Score = 41.0 bits (94), Expect = 0.14,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|209773324|gb|ACI84974.1| flagellar hook-filament junction protein 1 FlgK [Escherichia
          coli]
 gi|320659346|gb|EFX26915.1| flagellar hook-associated protein FlgK [Escherichia coli O55:H7
          str. USDA 5905]
          Length = 547

 Score = 41.0 bits (94), Expect = 0.14,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|325497610|gb|EGC95469.1| flagellar hook-associated protein FlgK [Escherichia fergusonii
          ECD227]
          Length = 548

 Score = 41.0 bits (94), Expect = 0.14,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLSAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|320186970|gb|EFW61683.1| Flagellar hook-associated protein FlgK [Shigella flexneri CDC
          796-83]
          Length = 547

 Score = 41.0 bits (94), Expect = 0.14,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|293409448|ref|ZP_06653024.1| flagellar hook-associated protein FlgK [Escherichia coli B354]
 gi|331662488|ref|ZP_08363411.1| flagellar hook-associated protein FlgK [Escherichia coli TA143]
 gi|331672601|ref|ZP_08373390.1| flagellar hook-associated protein FlgK [Escherichia coli TA280]
 gi|291469916|gb|EFF12400.1| flagellar hook-associated protein FlgK [Escherichia coli B354]
 gi|331060910|gb|EGI32874.1| flagellar hook-associated protein FlgK [Escherichia coli TA143]
 gi|331070244|gb|EGI41610.1| flagellar hook-associated protein FlgK [Escherichia coli TA280]
          Length = 547

 Score = 41.0 bits (94), Expect = 0.14,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|260574381|ref|ZP_05842385.1| flagellar hook-associated protein FlgK [Rhodobacter sp. SW2]
 gi|259023277|gb|EEW26569.1| flagellar hook-associated protein FlgK [Rhodobacter sp. SW2]
          Length = 485

 Score = 41.0 bits (94), Expect = 0.14,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 19/41 (46%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44
          S +  ++   A  +    V+ N++N  T G+   ++  + +
Sbjct: 6  SLSNAMSGLTASSRAAEVVSSNVANAMTEGYARREINLAAL 46



 Score = 38.7 bits (88), Expect = 0.78,   Method: Composition-based stats.
 Identities = 6/44 (13%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 192 VTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
             +++  LE+   ++  EM +++ + Q +++   +I      + 
Sbjct: 438 TALQQQELENG-VDTDQEMQKLLLIEQAYSANARVIQTAGDMID 480


>gi|218700416|ref|YP_002408045.1| flagellar hook-associated protein FlgK [Escherichia coli IAI39]
 gi|218370402|emb|CAR18207.1| flagellar hook-filament junction protein 1 [Escherichia coli
          IAI39]
          Length = 547

 Score = 41.0 bits (94), Expect = 0.14,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|4433373|dbj|BAA21014.1| FlgB protein [Salmonella enterica subsp. enterica serovar
          Typhimurium]
          Length = 66

 Score = 41.0 bits (94), Expect = 0.14,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 23/50 (46%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          A     QR   +A N++N DT G++   + F+  +  +     ++   VA
Sbjct: 15 ALNLRAQRQEILAANIANADTPGYQARDIDFASELKKVMVRGREETGGVA 64


>gi|229102342|ref|ZP_04233050.1| Flagellar basal-body rod protein [Bacillus cereus Rock3-28]
 gi|229115184|ref|ZP_04244594.1| Flagellar basal-body rod protein [Bacillus cereus Rock1-3]
 gi|228668324|gb|EEL23756.1| Flagellar basal-body rod protein [Bacillus cereus Rock1-3]
 gi|228680989|gb|EEL35158.1| Flagellar basal-body rod protein [Bacillus cereus Rock3-28]
          Length = 135

 Score = 41.0 bits (94), Expect = 0.14,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 28/72 (38%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
             L  + +TV+ N++N +T G++   V F+E +           + + S  +       
Sbjct: 12 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMSKSSALYKNNAADLKSNPDLYQTNEM 71

Query: 72 SFISTGTELDFA 83
             +   +  +A
Sbjct: 72 HLPTVNMKNTYA 83


>gi|220913734|ref|YP_002489043.1| flagellar basal-body rod protein FlgC [Arthrobacter
           chlorophenolicus A6]
 gi|219860612|gb|ACL40954.1| flagellar basal-body rod protein FlgC [Arthrobacter
           chlorophenolicus A6]
          Length = 130

 Score = 41.0 bits (94), Expect = 0.14,   Method: Composition-based stats.
 Identities = 8/46 (17%), Positives = 22/46 (47%), Gaps = 1/46 (2%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G++   + +   +MG +I   + + +   ++D   ++ L A+  I 
Sbjct: 84  GYVRYPDIDLAEQMGALIVAQRGYQANAQVVDRARETYLAAL-EIG 128



 Score = 39.5 bits (90), Expect = 0.44,   Method: Composition-based stats.
 Identities = 15/109 (13%), Positives = 32/109 (29%), Gaps = 6/109 (5%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTD----TVG--FRTIKVKFSEVVGAIKNDIDQKIS 57
           +  I   A     + L  V+DN++N +    T G  FR   ++ +E        +     
Sbjct: 5   AIGIAGTALTVHRKWLDAVSDNLANMNNAARTDGEAFRARYIEAAEGTDGTGVYVRSTPE 64

Query: 58  FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106
             A G+     +     + G      ++                 + + 
Sbjct: 65  GDAEGRMVYQPDHPLADAEGYVRYPDIDLAEQMGALIVAQRGYQANAQV 113


>gi|300936133|ref|ZP_07151072.1| flagellar hook-associated protein FlgK [Escherichia coli MS 21-1]
 gi|300458711|gb|EFK22204.1| flagellar hook-associated protein FlgK [Escherichia coli MS 21-1]
          Length = 458

 Score = 41.0 bits (94), Expect = 0.14,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 23/78 (29%), Gaps = 2/78 (2%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M    NIG +     +  L+  A N +N  T G+     + S + GA     +   + V 
Sbjct: 1  MD-MINIGYSGASTAQVELNVTAQNTANAMTTGYTRQVAEISTI-GASGGSPNSAGNGVQ 58

Query: 61 SGKEYLSKEVGSFISTGT 78
                            
Sbjct: 59 VDSIRRVSNQYQVNQVWY 76


>gi|331646340|ref|ZP_08347443.1| flagellar hook-associated protein FlgK [Escherichia coli M605]
 gi|281178191|dbj|BAI54521.1| flagellar hook-filament junction protein 1 FlgK [Escherichia coli
          SE15]
 gi|330910896|gb|EGH39406.1| flagellar hook-associated protein FlgK [Escherichia coli AA86]
 gi|331045092|gb|EGI17219.1| flagellar hook-associated protein FlgK [Escherichia coli M605]
          Length = 547

 Score = 41.0 bits (94), Expect = 0.14,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|215486291|ref|YP_002328722.1| flagellar hook-associated protein FlgK [Escherichia coli O127:H6
          str. E2348/69]
 gi|312968844|ref|ZP_07783051.1| flagellar hook-associated protein FlgK [Escherichia coli 2362-75]
 gi|215264363|emb|CAS08720.1| flagellar hook-filament junction protein 1 [Escherichia coli
          O127:H6 str. E2348/69]
 gi|312286246|gb|EFR14159.1| flagellar hook-associated protein FlgK [Escherichia coli 2362-75]
          Length = 547

 Score = 41.0 bits (94), Expect = 0.14,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|187732740|ref|YP_001880749.1| flagellar hook-associated protein FlgK [Shigella boydii CDC
          3083-94]
 gi|187429732|gb|ACD09006.1| flagellar hook-associated protein FlgK [Shigella boydii CDC
          3083-94]
          Length = 547

 Score = 41.0 bits (94), Expect = 0.14,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|300816784|ref|ZP_07097004.1| flagellar hook-associated protein FlgK [Escherichia coli MS
          107-1]
 gi|309798076|ref|ZP_07692451.1| flagellar hook-associated protein FlgK [Escherichia coli MS
          145-7]
 gi|300530558|gb|EFK51620.1| flagellar hook-associated protein FlgK [Escherichia coli MS
          107-1]
 gi|308118359|gb|EFO55621.1| flagellar hook-associated protein FlgK [Escherichia coli MS
          145-7]
          Length = 547

 Score = 41.0 bits (94), Expect = 0.15,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|261211316|ref|ZP_05925604.1| flagellar hook-associated protein FlgK [Vibrio sp. RC341]
 gi|260839271|gb|EEX65897.1| flagellar hook-associated protein FlgK [Vibrio sp. RC341]
          Length = 624

 Score = 41.0 bits (94), Expect = 0.15,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 28/84 (33%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
           N+G  + L  +++L+T   N+SN +T G+    V     +          +        
Sbjct: 6  LNVGTQSVLTAQRQLNTTGHNISNVNTEGYSRQSVIQGTNMPRQYGGETYGMGVHVENVR 65

Query: 65 YLSKEVGSFISTGTELDFALEGDA 88
              +           D++ + D 
Sbjct: 66 RSWDQFAVKELNIASTDYSFKRDT 89



 Score = 37.2 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 6/37 (16%), Positives = 14/37 (37%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N   E   M+   Q + + + +I  +  +    +
Sbjct: 585 SGVNLDEEAANMMKFQQAYMASSRIIQASNDTFNTIL 621


>gi|260867445|ref|YP_003233847.1| flagellar hook-filament junction protein FlgK [Escherichia coli
          O111:H- str. 11128]
 gi|257763801|dbj|BAI35296.1| flagellar hook-filament junction protein FlgK [Escherichia coli
          O111:H- str. 11128]
          Length = 547

 Score = 41.0 bits (94), Expect = 0.15,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|260854565|ref|YP_003228456.1| flagellar hook-filament junction protein FlgK [Escherichia coli
          O26:H11 str. 11368]
 gi|257753214|dbj|BAI24716.1| flagellar hook-filament junction protein FlgK [Escherichia coli
          O26:H11 str. 11368]
 gi|323156889|gb|EFZ43023.1| flagellar hook-associated protein FlgK [Escherichia coli EPECa14]
          Length = 547

 Score = 41.0 bits (94), Expect = 0.15,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|295678061|ref|YP_003606585.1| flagellar basal-body rod protein FlgB [Burkholderia sp. CCGE1002]
 gi|295437904|gb|ADG17074.1| flagellar basal-body rod protein FlgB [Burkholderia sp. CCGE1002]
          Length = 166

 Score = 41.0 bits (94), Expect = 0.15,   Method: Composition-based stats.
 Identities = 8/54 (14%), Positives = 19/54 (35%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
          A      R   ++ N++N DT G++   + F+  +           +   +   
Sbjct: 15 AMDVRAYRQELLSSNIANADTPGYKARDIDFASSLAGALKKTGGSTAGQGASNN 68


>gi|271500063|ref|YP_003333088.1| flagellar basal-body rod protein FlgB [Dickeya dadantii Ech586]
 gi|270343618|gb|ACZ76383.1| flagellar basal-body rod protein FlgB [Dickeya dadantii Ech586]
          Length = 139

 Score = 41.0 bits (94), Expect = 0.15,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 21/62 (33%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   +A N++N DT G++   + F+  +  +          V+          
Sbjct: 15 ALNLRAQRQEILAANIANADTPGYQARDIDFASELNKVMEQGRTSNQSVSLNLTSTRHIP 74

Query: 71 GS 72
            
Sbjct: 75 AQ 76


>gi|260853472|ref|YP_003227363.1| putative lateral flagellar hook-filament junction protein
          [Escherichia coli O26:H11 str. 11368]
 gi|257752121|dbj|BAI23623.1| predicted lateral flagellar hook-filament junction protein
          [Escherichia coli O26:H11 str. 11368]
 gi|323158097|gb|EFZ44196.1| flagellar hook-associated protein FlgK [Escherichia coli EPECa14]
          Length = 458

 Score = 41.0 bits (94), Expect = 0.15,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 23/78 (29%), Gaps = 2/78 (2%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M    NIG +     +  L+  A N +N  T G+     + S + GA     +   + V 
Sbjct: 1  MD-MINIGYSGASTAQVELNVTAQNTANAMTTGYTRQVAEISTI-GASGGSPNSAGNGVQ 58

Query: 61 SGKEYLSKEVGSFISTGT 78
                            
Sbjct: 59 VDSIRRVSNQYQVNQVWY 76


>gi|152997576|ref|YP_001342411.1| flagellar hook-associated protein FlgK [Marinomonas sp. MWYL1]
 gi|150838500|gb|ABR72476.1| flagellar hook-associated protein FlgK [Marinomonas sp. MWYL1]
          Length = 658

 Score = 41.0 bits (94), Expect = 0.15,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 1/41 (2%)

Query: 1  MQTSFN-IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
          M ++   IGL+  L+   R++T   N +N DT G+   +  
Sbjct: 1  MGSNLYSIGLSGLLSSNARINTTGQNTANVDTEGYSRQRTD 41


>gi|320196436|gb|EFW71059.1| Flagellar hook-associated protein FlgK [Escherichia coli
          WV_060327]
          Length = 547

 Score = 41.0 bits (94), Expect = 0.15,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|331666552|ref|ZP_08367426.1| flagellar hook-associated protein FlgK [Escherichia coli TA271]
 gi|331065776|gb|EGI37660.1| flagellar hook-associated protein FlgK [Escherichia coli TA271]
          Length = 458

 Score = 41.0 bits (94), Expect = 0.15,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 23/78 (29%), Gaps = 2/78 (2%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M    NIG +     +  L+  A N +N  T G+     + S + GA     +   + V 
Sbjct: 1  MD-MINIGYSGASTAQVELNVTAQNTANAMTTGYTRQVAEISTI-GASGGSPNSAGNGVQ 58

Query: 61 SGKEYLSKEVGSFISTGT 78
                            
Sbjct: 59 VDSIRRVSNQYQVNQVWY 76


>gi|307313513|ref|ZP_07593134.1| flagellar hook-associated protein FlgK [Escherichia coli W]
 gi|306906681|gb|EFN37192.1| flagellar hook-associated protein FlgK [Escherichia coli W]
 gi|315059548|gb|ADT73875.1| flagellar hook-filament junction protein 1 [Escherichia coli W]
 gi|323181553|gb|EFZ66973.1| flagellar hook-associated protein FlgK [Escherichia coli 1357]
 gi|323379893|gb|ADX52161.1| flagellar hook-associated protein FlgK [Escherichia coli KO11]
          Length = 458

 Score = 41.0 bits (94), Expect = 0.15,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 23/78 (29%), Gaps = 2/78 (2%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M    NIG +     +  L+  A N +N  T G+     + S + GA     +   + V 
Sbjct: 1  MD-MINIGYSGASTAQVELNVTAQNTANAMTTGYTRQVAEISTI-GASGGSPNSAGNGVQ 58

Query: 61 SGKEYLSKEVGSFISTGT 78
                            
Sbjct: 59 VDSIRRVSNQYQVNQVWY 76


>gi|300922608|ref|ZP_07138708.1| flagellar hook-associated protein FlgK [Escherichia coli MS
          182-1]
 gi|301328548|ref|ZP_07221609.1| flagellar hook-associated protein FlgK [Escherichia coli MS 78-1]
 gi|300421085|gb|EFK04396.1| flagellar hook-associated protein FlgK [Escherichia coli MS
          182-1]
 gi|300844940|gb|EFK72700.1| flagellar hook-associated protein FlgK [Escherichia coli MS 78-1]
          Length = 547

 Score = 41.0 bits (94), Expect = 0.15,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|222032835|emb|CAP75574.1| flagellar hook-associated protein 1 [Escherichia coli LF82]
 gi|312945644|gb|ADR26471.1| flagellar hook-associated protein FlgK [Escherichia coli O83:H1
          str. NRG 857C]
          Length = 547

 Score = 41.0 bits (94), Expect = 0.15,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|94495413|ref|ZP_01301993.1| flagellar cell-proximal portion protein [Sphingomonas sp. SKA58]
 gi|94424801|gb|EAT09822.1| flagellar cell-proximal portion protein [Sphingomonas sp. SKA58]
          Length = 138

 Score = 41.0 bits (94), Expect = 0.15,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 18/36 (50%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +S  E+  MI   + + +   +++  +  MLE IR
Sbjct: 100 VDSNAELVDMIETARMYQNNVQVLNTAKSLMLETIR 135



 Score = 36.8 bits (83), Expect = 2.6,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 43/123 (34%), Gaps = 9/123 (7%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKF---SEVVGAIKNDI 52
              F+I   A  A   RL+T A NM+N  +  G     +R IK  F   ++  G     +
Sbjct: 9   MNIFDIAGRAMSAQLVRLNTTASNMANAGNVTGSAQDAYRAIKPVFTSVTDSPGVSTVKV 68

Query: 53  DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDG 112
              ++  A   +          + G   + A++ +A          +   + +   T   
Sbjct: 69  SDVVTTKAEPTKRHDPNHPLADANGDVWEAAVDSNAELVDMIETARMYQNNVQVLNTAKS 128

Query: 113 SLV 115
            ++
Sbjct: 129 LML 131


>gi|163939549|ref|YP_001644433.1| flagellar basal body rod protein FlgB [Bacillus
          weihenstephanensis KBAB4]
 gi|163861746|gb|ABY42805.1| flagellar basal-body rod protein [Bacillus weihenstephanensis
          KBAB4]
          Length = 135

 Score = 41.0 bits (94), Expect = 0.15,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 31/72 (43%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
             L  + +TV+ N++N +T G++   V F+E +        +  + + S  +     V 
Sbjct: 12 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEKMNMSSGLYKKNAADLKSNPDLYQTNVM 71

Query: 72 SFISTGTELDFA 83
             +  T+  +A
Sbjct: 72 HLPTANTKNTYA 83


>gi|327254560|gb|EGE66176.1| flagellar hook-associated protein FlgK [Escherichia coli STEC_7v]
          Length = 458

 Score = 41.0 bits (94), Expect = 0.15,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 23/78 (29%), Gaps = 2/78 (2%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M    NIG +     +  L+  A N +N  T G+     + S + GA     +   + V 
Sbjct: 1  MD-MINIGYSGASTAQVELNVTAQNTANAMTTGYTRQVAEISTI-GASGGSPNSAGNGVQ 58

Query: 61 SGKEYLSKEVGSFISTGT 78
                            
Sbjct: 59 VDSIRRVSNQYQVNQVWY 76


>gi|323967023|gb|EGB62449.1| flagellar hook protein FlgK [Escherichia coli M863]
 gi|327253481|gb|EGE65119.1| flagellar hook-associated protein FlgK [Escherichia coli STEC_7v]
          Length = 547

 Score = 41.0 bits (94), Expect = 0.15,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|323190594|gb|EFZ75866.1| flagellar hook-associated protein FlgK [Escherichia coli RN587/1]
          Length = 547

 Score = 41.0 bits (94), Expect = 0.15,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|322382414|ref|ZP_08056317.1| FlgK-like protein [Paenibacillus larvae subsp. larvae B-3650]
 gi|321153631|gb|EFX46010.1| FlgK-like protein [Paenibacillus larvae subsp. larvae B-3650]
          Length = 472

 Score = 41.0 bits (94), Expect = 0.15,   Method: Composition-based stats.
 Identities = 14/124 (11%), Positives = 37/124 (29%), Gaps = 6/124 (4%)

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
              ++   +   ++  + +       G               S+    G   +E +    
Sbjct: 352 DEKLISGNNTLAKLMAQLKDTKFTFSGAGRGITNSTINDFYGSLVGQLGVQSKEATRQYE 411

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           N     ++  +  T   G +E        EM +M+     FN+    +   ++ + + I 
Sbjct: 412 NEGKLVVQADTRRTSVSGVVEL------EEMMEMVKYNHSFNAAARFMTTYDEILNKLIN 465

Query: 240 NIAS 243
              +
Sbjct: 466 GTGT 469


>gi|320664481|gb|EFX31632.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
          str. LSU-61]
          Length = 547

 Score = 41.0 bits (94), Expect = 0.15,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|331657144|ref|ZP_08358106.1| flagellar hook-associated protein FlgK [Escherichia coli TA206]
 gi|324007922|gb|EGB77141.1| flagellar hook-associated protein FlgK [Escherichia coli MS 57-2]
 gi|331055392|gb|EGI27401.1| flagellar hook-associated protein FlgK [Escherichia coli TA206]
          Length = 547

 Score = 41.0 bits (94), Expect = 0.15,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|167568104|ref|ZP_02361020.1| flagellar basal body rod protein FlgB [Burkholderia oklahomensis
          EO147]
 gi|167574222|ref|ZP_02367096.1| flagellar basal body rod protein FlgB [Burkholderia oklahomensis
          C6786]
          Length = 163

 Score = 41.0 bits (94), Expect = 0.15,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 21/52 (40%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
          A      R   ++ N++N DT G+R   V FS  +         + +  A+ 
Sbjct: 15 ALDVRTYRQELLSSNIANADTPGYRARDVDFSSTLARALKQDGARSAGNAAQ 66


>gi|146294544|ref|YP_001184968.1| flagellar hook-associated protein FlgK [Shewanella putrefaciens
          CN-32]
 gi|145566234|gb|ABP77169.1| flagellar hook-associated protein FlgK [Shewanella putrefaciens
          CN-32]
          Length = 457

 Score = 41.0 bits (94), Expect = 0.15,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 19/39 (48%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
           +  NIG +  LA    L+  ++N++N    G+   +V 
Sbjct: 1  MSMLNIGKSGLLASMAALNATSNNVANAMVAGYSRQQVM 39



 Score = 40.2 bits (92), Expect = 0.27,   Method: Composition-based stats.
 Identities = 6/39 (15%), Positives = 13/39 (33%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            S  N   E   +I   Q + +   +I   ++     + 
Sbjct: 417 TSGVNPDEEGINLIIYQQSYMANAKVISTADQLFQTMLS 455


>gi|224370754|ref|YP_002604918.1| putative flagellar hook-associated protein [Desulfobacterium
            autotrophicum HRM2]
 gi|223693471|gb|ACN16754.1| putative flagellar hook-associated protein [Desulfobacterium
            autotrophicum HRM2]
          Length = 1268

 Score = 41.0 bits (94), Expect = 0.15,   Method: Composition-based stats.
 Identities = 6/37 (16%), Positives = 16/37 (43%)

Query: 202  SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            S  +   EM  +I     F + + L+  +++ +   +
Sbjct: 1229 SAVSLDEEMINLIKYQHAFGAASKLVTVSDEMLNTLL 1265



 Score = 38.3 bits (87), Expect = 0.92,   Method: Composition-based stats.
 Identities = 7/32 (21%), Positives = 16/32 (50%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGF 34
          ++ NI   A  A +  L+   +N++N +   +
Sbjct: 6  STLNIAQGAIAAQQYGLNVTGNNIANVNNPDY 37


>gi|157160609|ref|YP_001457927.1| flagellar hook-associated protein FlgK [Escherichia coli HS]
 gi|170020522|ref|YP_001725476.1| flagellar hook-associated protein FlgK [Escherichia coli ATCC
          8739]
 gi|312971219|ref|ZP_07785397.1| flagellar hook-associated protein FlgK [Escherichia coli 1827-70]
 gi|157066289|gb|ABV05544.1| flagellar hook-associated protein FlgK [Escherichia coli HS]
 gi|169755450|gb|ACA78149.1| flagellar hook-associated protein FlgK [Escherichia coli ATCC
          8739]
 gi|310336421|gb|EFQ01607.1| flagellar hook-associated protein FlgK [Escherichia coli 1827-70]
          Length = 547

 Score = 41.0 bits (94), Expect = 0.15,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|332669188|ref|YP_004452196.1| flagellar basal-body rod protein FlgC [Cellulomonas fimi ATCC 484]
 gi|332338226|gb|AEE44809.1| flagellar basal-body rod protein FlgC [Cellulomonas fimi ATCC 484]
          Length = 132

 Score = 41.0 bits (94), Expect = 0.15,   Method: Composition-based stats.
 Identities = 5/43 (11%), Positives = 21/43 (48%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   + +   +M Q++   + + +   ++D   ++   A++
Sbjct: 86  GYVRYPDIDMSSQMTQLMMAQRGYQANAAVVDRARETYNAALQ 128



 Score = 37.5 bits (85), Expect = 1.7,   Method: Composition-based stats.
 Identities = 17/110 (15%), Positives = 30/110 (27%), Gaps = 7/110 (6%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKN-DIDQKI 56
           +  I         + L  V+DN+SN  TV       FR   V  +E  G  +   +   +
Sbjct: 6   AIGIASTGLTVHRKWLDAVSDNLSNLSTVRPTSEEAFRAKYVVAAESAGENQGVQVAGIV 65

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106
              A G+             G      ++  +              +   
Sbjct: 66  EGSAEGRLVYEPGHPLADEDGYVRYPDIDMSSQMTQLMMAQRGYQANAAV 115


>gi|292489136|ref|YP_003532023.1| flagellar basal-body rod protein FlgB [Erwinia amylovora
          CFBP1430]
 gi|291554570|emb|CBA22186.1| Flagellar basal-body rod protein flgB [Erwinia amylovora
          CFBP1430]
 gi|312173294|emb|CBX81549.1| Flagellar basal-body rod protein flgB [Erwinia amylovora ATCC
          BAA-2158]
          Length = 147

 Score = 41.0 bits (94), Expect = 0.15,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 24/68 (35%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A   L +R   +A N++N DT G+    + FS+ +     +     S V+          
Sbjct: 27 ALSLLSRRQEVLASNIANADTPGYLARDIDFSQQLKNTLANQSMAKSPVSLSLTAEKHIE 86

Query: 71 GSFISTGT 78
          G       
Sbjct: 87 GKGRPFDD 94


>gi|229172390|ref|ZP_04299949.1| Flagellar basal-body rod protein [Bacillus cereus MM3]
 gi|228610861|gb|EEK68124.1| Flagellar basal-body rod protein [Bacillus cereus MM3]
          Length = 135

 Score = 41.0 bits (94), Expect = 0.15,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 30/72 (41%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
             L  + +TV+ N++N +T G++   V F+E +          ++ + S  +       
Sbjct: 12 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNVADLKSNPDLYQTNEM 71

Query: 72 SFISTGTELDFA 83
             +  T+  +A
Sbjct: 72 HLPTVNTKNTYA 83


>gi|317129212|ref|YP_004095494.1| flagellar basal-body rod protein FlgB [Bacillus cellulosilyticus
          DSM 2522]
 gi|315474160|gb|ADU30763.1| flagellar basal-body rod protein FlgB [Bacillus cellulosilyticus
          DSM 2522]
          Length = 134

 Score = 41.0 bits (94), Expect = 0.15,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 22/42 (52%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51
           A  A   R +T+A N++N DT  ++  K  FS  + +  N+
Sbjct: 14 TALSASMTRHNTIAQNIANVDTPNYKAKKAVFSHELNSAMNN 55


>gi|218689035|ref|YP_002397247.1| flagellar hook-associated protein FlgK [Escherichia coli ED1a]
 gi|218426599|emb|CAR07427.1| flagellar hook-filament junction protein 1 [Escherichia coli
          ED1a]
          Length = 547

 Score = 41.0 bits (94), Expect = 0.15,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|15801199|ref|NP_287216.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
          EDL933]
 gi|15830714|ref|NP_309487.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
          str. Sakai]
 gi|168747142|ref|ZP_02772164.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
          str. EC4113]
 gi|168758625|ref|ZP_02783632.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
          str. EC4401]
 gi|168764494|ref|ZP_02789501.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
          str. EC4501]
 gi|168767741|ref|ZP_02792748.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
          str. EC4486]
 gi|168773927|ref|ZP_02798934.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
          str. EC4196]
 gi|168783612|ref|ZP_02808619.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
          str. EC4076]
 gi|168790017|ref|ZP_02815024.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
          str. EC869]
 gi|168802027|ref|ZP_02827034.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
          str. EC508]
 gi|195935472|ref|ZP_03080854.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
          str. EC4024]
 gi|208808965|ref|ZP_03251302.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
          str. EC4206]
 gi|208815841|ref|ZP_03257020.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
          str. EC4045]
 gi|208822064|ref|ZP_03262383.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
          str. EC4042]
 gi|209396607|ref|YP_002269928.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
          str. EC4115]
 gi|217328179|ref|ZP_03444261.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
          str. TW14588]
 gi|254792464|ref|YP_003077301.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
          str. TW14359]
 gi|261227013|ref|ZP_05941294.1| flagellar hook-filament junction protein 1 [Escherichia coli
          O157:H7 str. FRIK2000]
 gi|261256247|ref|ZP_05948780.1| flagellar hook-filament junction protein 1 [Escherichia coli
          O157:H7 str. FRIK966]
 gi|12514623|gb|AAG55828.1|AE005318_5 flagellar biosynthesis, hook-filament junction protein 1
          [Escherichia coli O157:H7 str. EDL933]
 gi|13360924|dbj|BAB34883.1| flagellar hook-filament junction protein 1 FlgK [Escherichia coli
          O157:H7 str. Sakai]
 gi|187770507|gb|EDU34351.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
          str. EC4196]
 gi|188018095|gb|EDU56217.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
          str. EC4113]
 gi|188999081|gb|EDU68067.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
          str. EC4076]
 gi|189354572|gb|EDU72991.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
          str. EC4401]
 gi|189363324|gb|EDU81743.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
          str. EC4486]
 gi|189365527|gb|EDU83943.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
          str. EC4501]
 gi|189370488|gb|EDU88904.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
          str. EC869]
 gi|189375922|gb|EDU94338.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
          str. EC508]
 gi|208728766|gb|EDZ78367.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
          str. EC4206]
 gi|208732489|gb|EDZ81177.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
          str. EC4045]
 gi|208737549|gb|EDZ85232.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
          str. EC4042]
 gi|209158007|gb|ACI35440.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
          str. EC4115]
 gi|209773318|gb|ACI84971.1| flagellar hook-filament junction protein 1 FlgK [Escherichia
          coli]
 gi|209773320|gb|ACI84972.1| flagellar hook-filament junction protein 1 FlgK [Escherichia
          coli]
 gi|209773322|gb|ACI84973.1| flagellar hook-filament junction protein 1 FlgK [Escherichia
          coli]
 gi|209773326|gb|ACI84975.1| flagellar hook-filament junction protein 1 FlgK [Escherichia
          coli]
 gi|217318606|gb|EEC27032.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
          str. TW14588]
 gi|254591864|gb|ACT71225.1| flagellar hook-filament junction protein 1 [Escherichia coli
          O157:H7 str. TW14359]
 gi|320189765|gb|EFW64421.1| Flagellar hook-associated protein FlgK [Escherichia coli O157:H7
          str. EC1212]
 gi|320637533|gb|EFX07333.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7
          str. G5101]
 gi|320643094|gb|EFX12295.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H-
          str. 493-89]
 gi|320648552|gb|EFX17207.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H-
          str. H 2687]
 gi|320653866|gb|EFX21940.1| flagellar hook-associated protein FlgK [Escherichia coli O55:H7
          str. 3256-97 TW 07815]
 gi|326339304|gb|EGD63118.1| Flagellar hook-associated protein FlgK [Escherichia coli O157:H7
          str. 1125]
 gi|326344735|gb|EGD68483.1| Flagellar hook-associated protein FlgK [Escherichia coli O157:H7
          str. 1044]
          Length = 547

 Score = 41.0 bits (94), Expect = 0.15,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|323976263|gb|EGB71356.1| flagellar hook protein FlgK [Escherichia coli TW10509]
          Length = 458

 Score = 41.0 bits (94), Expect = 0.16,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 23/78 (29%), Gaps = 2/78 (2%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M    NIG +     +  L+  A N +N  T G+     + S + GA     +   + V 
Sbjct: 1  MD-MINIGYSGASTAQVELNVTAQNTANAMTTGYTRQVAEISTI-GASGGSPNSAGNGVQ 58

Query: 61 SGKEYLSKEVGSFISTGT 78
                            
Sbjct: 59 VDSIRRVSNQYQVNQVWY 76


>gi|309788151|ref|ZP_07682757.1| flagellar hook-associated protein FlgK [Shigella dysenteriae
          1617]
 gi|308924003|gb|EFP69504.1| flagellar hook-associated protein FlgK [Shigella dysenteriae
          1617]
          Length = 366

 Score = 41.0 bits (94), Expect = 0.16,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|293414375|ref|ZP_06657024.1| flagellar hook-associated protein FlgK [Escherichia coli B185]
 gi|291434433|gb|EFF07406.1| flagellar hook-associated protein FlgK [Escherichia coli B185]
          Length = 547

 Score = 41.0 bits (94), Expect = 0.16,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|254473329|ref|ZP_05086726.1| flagellar basal-body rod protein FlgC [Pseudovibrio sp. JE062]
 gi|211957445|gb|EEA92648.1| flagellar basal-body rod protein FlgC [Pseudovibrio sp. JE062]
          Length = 139

 Score = 41.0 bits (94), Expect = 0.16,   Method: Composition-based stats.
 Identities = 15/127 (11%), Positives = 39/127 (30%)

Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176
           +S    V       +     +        G    + K I         +    V  +N G
Sbjct: 12  SSSGLRVQSQRMRIVSENLANVQSTGDTPGANPYQRKTITFKSEVDRALGANLVAVKNIG 71

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
                     +       + G ++  N N++ E+  M   ++ + +   ++ ++ + +  
Sbjct: 72  SDKGDYRVEFDPSHPAADENGNVKYPNVNTLIELADMREASRSYEAGLQMMVKSREMITR 131

Query: 237 AIRNIAS 243
            I  + S
Sbjct: 132 TIDLLRS 138



 Score = 40.6 bits (93), Expect = 0.19,   Method: Composition-based stats.
 Identities = 15/104 (14%), Positives = 35/104 (33%), Gaps = 8/104 (7%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKF-SEVVGAIKNDIDQK 55
           S  I  +      QR+  V++N++N  + G       ++   + F SEV  A+  ++   
Sbjct: 8   SLKISSSGLRVQSQRMRIVSENLANVQSTGDTPGANPYQRKTITFKSEVDRALGANLVAV 67

Query: 56  ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
            +  +   +Y  +   S  +     +            +     
Sbjct: 68  KNIGSDKGDYRVEFDPSHPAADENGNVKYPNVNTLIELADMREA 111


>gi|217959227|ref|YP_002337775.1| flagellar basal body rod protein FlgB [Bacillus cereus AH187]
 gi|229138443|ref|ZP_04267032.1| Flagellar basal-body rod protein [Bacillus cereus BDRD-ST26]
 gi|217063551|gb|ACJ77801.1| flagellar basal-body rod protein FlgB [Bacillus cereus AH187]
 gi|228644980|gb|EEL01223.1| Flagellar basal-body rod protein [Bacillus cereus BDRD-ST26]
          Length = 135

 Score = 41.0 bits (94), Expect = 0.16,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 29/72 (40%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
             L  + +TV+ N++N +T G++   V F+E +           + + +  +       
Sbjct: 12 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKSNTADLKTNADLYQTNEM 71

Query: 72 SFISTGTELDFA 83
             +  T+  +A
Sbjct: 72 HLPTVNTKNTYA 83


>gi|163794627|ref|ZP_02188597.1| putative flagellar basal-body rod protein flgC [alpha
           proteobacterium BAL199]
 gi|159179900|gb|EDP64425.1| putative flagellar basal-body rod protein flgC [alpha
           proteobacterium BAL199]
          Length = 138

 Score = 41.0 bits (94), Expect = 0.16,   Method: Composition-based stats.
 Identities = 5/42 (11%), Positives = 15/42 (35%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G +   N + + E    I   ++  +    I   ++ +   +
Sbjct: 93  GLVHRPNVDLVRETADQISGQRQLEANLATIRAADELLQATL 134


>gi|157692297|ref|YP_001486759.1| flagellar basal body rod protein FlgB [Bacillus pumilus SAFR-032]
 gi|157681055|gb|ABV62199.1| flagellar basal body rod protein [Bacillus pumilus SAFR-032]
          Length = 129

 Score = 41.0 bits (94), Expect = 0.16,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 19/36 (52%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV 45
           A      +   +++N++N DT  +++  V F +++
Sbjct: 13 NALGRANVKQKVISNNIANIDTPNYKSKNVAFHDML 48


>gi|110641258|ref|YP_668988.1| flagellar hook-associated protein FlgK [Escherichia coli 536]
 gi|191172473|ref|ZP_03034014.1| flagellar hook-associated protein FlgK [Escherichia coli F11]
 gi|300982573|ref|ZP_07176195.1| flagellar hook-associated protein FlgK [Escherichia coli MS
          200-1]
 gi|110342850|gb|ABG69087.1| flagellar hook-associated protein 1 [Escherichia coli 536]
 gi|190907357|gb|EDV66955.1| flagellar hook-associated protein FlgK [Escherichia coli F11]
 gi|300307154|gb|EFJ61674.1| flagellar hook-associated protein FlgK [Escherichia coli MS
          200-1]
 gi|324013281|gb|EGB82500.1| flagellar hook-associated protein FlgK [Escherichia coli MS 60-1]
          Length = 547

 Score = 41.0 bits (94), Expect = 0.16,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|188492078|ref|ZP_02999348.1| flagellar hook-associated protein FlgK [Escherichia coli 53638]
 gi|188487277|gb|EDU62380.1| flagellar hook-associated protein FlgK [Escherichia coli 53638]
          Length = 547

 Score = 41.0 bits (94), Expect = 0.16,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|317047697|ref|YP_004115345.1| flagellar hook-associated protein FlgK [Pantoea sp. At-9b]
 gi|316949314|gb|ADU68789.1| flagellar hook-associated protein FlgK [Pantoea sp. At-9b]
          Length = 547

 Score = 41.0 bits (94), Expect = 0.16,   Method: Composition-based stats.
 Identities = 22/193 (11%), Positives = 49/193 (25%), Gaps = 1/193 (0%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M +  N  ++   A +  LST ++N+SN    G+        +   +  +      + V 
Sbjct: 1   MSSIINSAMSGLSAAQAALSTTSNNISNYTVAGYTRQTTILGQA-NSTLSGNSYYGNGVT 59

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
                   +        +        +  ++  S    +L+       T      +    
Sbjct: 60  VTGVQREYDEFITAQLRSASATYNAQNTQYSQISNIDDLLSTSTTSLSTSIQDFFTNVQN 119

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
                      Q    +    V +    +Q    + T     +  S   +    S I+  
Sbjct: 120 VVSNADDPSARQSMLSNAQGLVNQFQTTAQYLTNMQTSVNTDITSSVDQINTYTSQIANL 179

Query: 181 IPPTPLEDLSGVT 193
                       T
Sbjct: 180 NTQIAKLTTGDGT 192


>gi|120597311|ref|YP_961885.1| flagellar hook-associated protein FlgK [Shewanella sp. W3-18-1]
 gi|120557404|gb|ABM23331.1| flagellar hook-associated protein FlgK [Shewanella sp. W3-18-1]
          Length = 457

 Score = 41.0 bits (94), Expect = 0.16,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 19/39 (48%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
           +  NIG +  LA    L+  ++N++N    G+   +V 
Sbjct: 1  MSMLNIGKSGLLASMAALNATSNNVANAMVAGYSRQQVM 39



 Score = 40.2 bits (92), Expect = 0.28,   Method: Composition-based stats.
 Identities = 6/39 (15%), Positives = 13/39 (33%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            S  N   E   +I   Q + +   +I   ++     + 
Sbjct: 417 TSGVNPDEEGINLIIYQQSYMANAKVISTADQLFQTMLS 455


>gi|42780836|ref|NP_978083.1| flagellar basal body rod protein FlgB [Bacillus cereus ATCC
          10987]
 gi|42736756|gb|AAS40691.1| flagellar basal-body rod protein FlgB [Bacillus cereus ATCC
          10987]
          Length = 135

 Score = 41.0 bits (94), Expect = 0.16,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 29/72 (40%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
             L  + +TV+ N++N +T G++   V F+E +           + + +  +       
Sbjct: 12 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKSNTTDLKTNADLYQTNEM 71

Query: 72 SFISTGTELDFA 83
             +  T+  +A
Sbjct: 72 HLPTVNTKNTYA 83


>gi|28897549|ref|NP_797154.1| flagellar basal body rod protein FlgB [Vibrio parahaemolyticus
          RIMD 2210633]
 gi|153839689|ref|ZP_01992356.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus
          AQ3810]
 gi|260364608|ref|ZP_05777210.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus
          K5030]
 gi|260898117|ref|ZP_05906613.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus
          Peru-466]
 gi|260901950|ref|ZP_05910345.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus
          AQ4037]
 gi|5361005|gb|AAD42912.1|U12817_6 polar flagellar FlgB homolog [Vibrio parahaemolyticus]
 gi|28805761|dbj|BAC59038.1| polar flagellar FlgB [Vibrio parahaemolyticus RIMD 2210633]
 gi|149746799|gb|EDM57787.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus
          AQ3810]
 gi|308086116|gb|EFO35811.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus
          Peru-466]
 gi|308106785|gb|EFO44325.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus
          AQ4037]
 gi|308115123|gb|EFO52663.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus
          K5030]
 gi|328473456|gb|EGF44304.1| flagellar basal body rod protein FlgB [Vibrio parahaemolyticus
          10329]
          Length = 131

 Score = 41.0 bits (94), Expect = 0.16,   Method: Composition-based stats.
 Identities = 6/38 (15%), Positives = 19/38 (50%)

Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
          E+    ++ N++  +T G++   + F++ + A  +   
Sbjct: 20 ERNAEVISTNIAQANTPGYKARGLDFAKELQAATSGAS 57


>gi|126463751|ref|YP_001044865.1| flagellar basal body rod protein FlgB [Rhodobacter sphaeroides
          ATCC 17029]
 gi|332559807|ref|ZP_08414129.1| FlgB2 [Rhodobacter sphaeroides WS8N]
 gi|126105415|gb|ABN78093.1| flagellar basal-body rod protein FlgB [Rhodobacter sphaeroides
          ATCC 17029]
 gi|332277519|gb|EGJ22834.1| FlgB2 [Rhodobacter sphaeroides WS8N]
          Length = 127

 Score = 41.0 bits (94), Expect = 0.16,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 15/44 (34%), Gaps = 1/44 (2%)

Query: 8  GLAAQLALEQRLSTVADNMSNTDTVGFRT-IKVKFSEVVGAIKN 50
            +       R   VA N++N DT G+R     +F         
Sbjct: 11 AQSMARHAGLRTEVVAHNLANADTPGYRAQDLPEFESYASGTVG 54


>gi|332187874|ref|ZP_08389607.1| flagellar basal-body rod protein FlgC [Sphingomonas sp. S17]
 gi|332012035|gb|EGI54107.1| flagellar basal-body rod protein FlgC [Sphingomonas sp. S17]
          Length = 136

 Score = 41.0 bits (94), Expect = 0.16,   Method: Composition-based stats.
 Identities = 3/35 (8%), Positives = 15/35 (42%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            +   E+  M+   + + +   ++   +  +L+ +
Sbjct: 98  VDETRELVDMMETARTYQNNVEVMQTAKSLILDTL 132



 Score = 35.6 bits (80), Expect = 5.5,   Method: Composition-based stats.
 Identities = 16/126 (12%), Positives = 37/126 (29%), Gaps = 10/126 (7%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTD------TVGFRTIKVKFSEVVGAIKN----D 51
            + F +   A  A   R++T A N++N           ++T+K  F     A       D
Sbjct: 6   LSIFQVSGRAMSAQLVRMNTTASNLANAGGIAGSVETAYKTMKPVFRTSFDAATGLSTVD 65

Query: 52  IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDD 111
           +++ ++      +            G   + A++                 +     T  
Sbjct: 66  VEKIVTAGEDPTKRHDPNNPLADKDGNVFEAAVDETRELVDMMETARTYQNNVEVMQTAK 125

Query: 112 GSLVSA 117
             ++  
Sbjct: 126 SLILDT 131


>gi|253996322|ref|YP_003048386.1| flagellar basal-body rod protein FlgB [Methylotenera mobilis
          JLW8]
 gi|253983001|gb|ACT47859.1| flagellar basal-body rod protein FlgB [Methylotenera mobilis
          JLW8]
          Length = 135

 Score = 41.0 bits (94), Expect = 0.16,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 28/85 (32%), Gaps = 4/85 (4%)

Query: 1  MQTSFNIGLA----AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56
          M    +  L+    A     QR   +A N++N DT  ++   + F   + +       K 
Sbjct: 1  MINKLDAALSFHQNALRVRGQRQELIAANIANADTPNYKARDLDFGAAMKSAMAGAANKE 60

Query: 57 SFVASGKEYLSKEVGSFISTGTELD 81
          +F  +       +       G  + 
Sbjct: 61 AFNTNKTSDKHLDGIPSSIGGGAMF 85


>gi|206974988|ref|ZP_03235903.1| flagellar basal-body rod protein FlgB [Bacillus cereus H3081.97]
 gi|206747007|gb|EDZ58399.1| flagellar basal-body rod protein FlgB [Bacillus cereus H3081.97]
          Length = 135

 Score = 41.0 bits (94), Expect = 0.16,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 29/72 (40%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
             L  + +TV+ N++N +T G++   V F+E +           + + S  +       
Sbjct: 12 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKSNAADLKSNPDLYQTNEM 71

Query: 72 SFISTGTELDFA 83
             +  T+  +A
Sbjct: 72 HLPTVNTKNTYA 83


>gi|115523176|ref|YP_780087.1| flagellar basal body rod protein FlgB [Rhodopseudomonas palustris
          BisA53]
 gi|115517123|gb|ABJ05107.1| flagellar basal body rod protein [Rhodopseudomonas palustris
          BisA53]
          Length = 134

 Score = 41.0 bits (94), Expect = 0.16,   Method: Composition-based stats.
 Identities = 8/36 (22%), Positives = 21/36 (58%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
          F++  +    L  R ++++ N++N +T G+R   ++
Sbjct: 14 FDVASSHAQWLSLRQASISSNVANANTPGYRAQDIE 49


>gi|258621046|ref|ZP_05716080.1| Flagellar basal-body rod protein flgB [Vibrio mimicus VM573]
 gi|258625274|ref|ZP_05720182.1| Flagellar basal-body rod protein flgB [Vibrio mimicus VM603]
 gi|262170822|ref|ZP_06038500.1| flagellar basal-body rod protein FlgB [Vibrio mimicus MB-451]
 gi|258582447|gb|EEW07288.1| Flagellar basal-body rod protein flgB [Vibrio mimicus VM603]
 gi|258586434|gb|EEW11149.1| Flagellar basal-body rod protein flgB [Vibrio mimicus VM573]
 gi|261891898|gb|EEY37884.1| flagellar basal-body rod protein FlgB [Vibrio mimicus MB-451]
          Length = 131

 Score = 41.0 bits (94), Expect = 0.16,   Method: Composition-based stats.
 Identities = 15/95 (15%), Positives = 31/95 (32%), Gaps = 10/95 (10%)

Query: 16  EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID----------QKISFVASGKEY 65
           E+    +A N++  +T GF+   + F + + A  +                S   +G+  
Sbjct: 20  ERNSEVIATNIAQANTPGFKAKGMDFQKALQAASSGASISLSRTDGRHIPASSTVTGEIL 79

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALESPRGIIL 100
                      G  +D  LE + +   +      L
Sbjct: 80  YRTPTQPDTGDGNTVDVDLERNMFMQNQIRHQASL 114


>gi|254463526|ref|ZP_05076942.1| flagellar basal-body rod protein FlgB [Rhodobacterales bacterium
          HTCC2083]
 gi|206680115|gb|EDZ44602.1| flagellar basal-body rod protein FlgB [Rhodobacteraceae bacterium
          HTCC2083]
          Length = 128

 Score = 41.0 bits (94), Expect = 0.16,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 19/45 (42%)

Query: 9  LAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
           +A      R + +A N++N  T G++   + F   + A   D  
Sbjct: 12 ASALSLRSARNNMLASNIANAATPGYKARDMDFDREMSARIGDSP 56


>gi|91225870|ref|ZP_01260839.1| flagellar basal-body rod protein B [Vibrio alginolyticus 12G01]
 gi|262394942|ref|YP_003286796.1| flagellar basal-body rod protein FlgB [Vibrio sp. Ex25]
 gi|269965427|ref|ZP_06179546.1| Flagellar basal-body rod protein flgB [Vibrio alginolyticus 40B]
 gi|91189520|gb|EAS75796.1| flagellar basal-body rod protein B [Vibrio alginolyticus 12G01]
 gi|262338536|gb|ACY52331.1| flagellar basal-body rod protein FlgB [Vibrio sp. Ex25]
 gi|269829906|gb|EEZ84136.1| Flagellar basal-body rod protein flgB [Vibrio alginolyticus 40B]
          Length = 131

 Score = 41.0 bits (94), Expect = 0.16,   Method: Composition-based stats.
 Identities = 6/38 (15%), Positives = 19/38 (50%)

Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
          E+    ++ N++  +T G++   + F++ + A  +   
Sbjct: 20 ERNAEVISTNIAQANTPGYKARGLDFAKELQAATSGAS 57


>gi|324325761|gb|ADY21021.1| flagellar basal body rod protein FlgB [Bacillus thuringiensis
          serovar finitimus YBT-020]
          Length = 135

 Score = 41.0 bits (94), Expect = 0.16,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 29/72 (40%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
             L  + +TV+ N++N +T G++   V F+E +           + + +  +       
Sbjct: 12 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKSNTADLKTNADLYQTNEM 71

Query: 72 SFISTGTELDFA 83
             +  T+  +A
Sbjct: 72 HLPTVNTKNTYA 83


>gi|321445153|gb|EFX60611.1| hypothetical protein DAPPUDRAFT_342411 [Daphnia pulex]
          Length = 136

 Score = 41.0 bits (94), Expect = 0.16,   Method: Composition-based stats.
 Identities = 9/37 (24%), Positives = 19/37 (51%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA 47
          A +   +R   +A N++N DT G++   + F+  +  
Sbjct: 15 ALVLRSERQRLLASNIANADTPGYKARDMDFASALRE 51


>gi|322832561|ref|YP_004212588.1| flagellar basal-body rod protein FlgB [Rahnella sp. Y9602]
 gi|321167762|gb|ADW73461.1| flagellar basal-body rod protein FlgB [Rahnella sp. Y9602]
          Length = 136

 Score = 41.0 bits (94), Expect = 0.16,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 27/79 (34%), Gaps = 4/79 (5%)

Query: 1  MQTSFNIGL----AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56
          M    N  L     A     QR   ++ N++N DT G++   + F+  +  +        
Sbjct: 1  MLDKLNAALQFQQEALNLRAQRQEILSANIANADTPGYQARDIDFASQLQKVMEQGRASG 60

Query: 57 SFVASGKEYLSKEVGSFIS 75
          S ++           S + 
Sbjct: 61 SGISLSLTSDRHIPASNVQ 79


>gi|283833624|ref|ZP_06353365.1| flagellar hook-associated protein FlgK [Citrobacter youngae ATCC
          29220]
 gi|291071307|gb|EFE09416.1| flagellar hook-associated protein FlgK [Citrobacter youngae ATCC
          29220]
          Length = 550

 Score = 41.0 bits (94), Expect = 0.16,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLSAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|228907376|ref|ZP_04071234.1| Flagellar basal-body rod protein [Bacillus thuringiensis IBL 200]
 gi|228852237|gb|EEM97033.1| Flagellar basal-body rod protein [Bacillus thuringiensis IBL 200]
          Length = 135

 Score = 41.0 bits (94), Expect = 0.16,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 29/72 (40%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
             L  + +TV+ N++N +T G++   V F+E +           + + S  +       
Sbjct: 12 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMKKSSALYKNNAADLKSNPDLYQTNEM 71

Query: 72 SFISTGTELDFA 83
             +  T+  +A
Sbjct: 72 HLPTVNTKNTYA 83


>gi|153831731|ref|ZP_01984398.1| flagellar basal-body rod protein FlgC [Vibrio harveyi HY01]
 gi|156976139|ref|YP_001447045.1| flagellar basal body rod protein FlgC [Vibrio harveyi ATCC
           BAA-1116]
 gi|269960114|ref|ZP_06174490.1| Flagellar basal-body rod protein C [Vibrio harveyi 1DA3]
 gi|148872241|gb|EDL71058.1| flagellar basal-body rod protein FlgC [Vibrio harveyi HY01]
 gi|156527733|gb|ABU72818.1| hypothetical protein VIBHAR_04910 [Vibrio harveyi ATCC BAA-1116]
 gi|269835085|gb|EEZ89168.1| Flagellar basal-body rod protein C [Vibrio harveyi 1DA3]
          Length = 144

 Score = 40.6 bits (93), Expect = 0.17,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 19/43 (44%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   + + + EM  M+  T+ F +   ++   +      +R
Sbjct: 97  GYVYYPDIDVVSEMADMMSATRSFETNVEVLTNVKSMQQGLLR 139



 Score = 34.8 bits (78), Expect = 9.5,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 35/96 (36%), Gaps = 6/96 (6%)

Query: 10  AAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +A  A   RL+TVA N++N D V       ++ +K  F+ V    +   +  +   A  +
Sbjct: 12  SAMTAQTVRLNTVASNLANADAVSANPDDAYKALKPVFATVYQKTQMATENGVYPNAEVR 71

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
                +         E +  L  D  +       ++
Sbjct: 72  IVDVVQNAGQAEKRFEPNNPLANDEGYVYYPDIDVV 107


>gi|188493729|ref|ZP_03000999.1| flagellar basal-body rod protein FlgB [Escherichia coli 53638]
 gi|188488928|gb|EDU64031.1| flagellar basal-body rod protein FlgB [Escherichia coli 53638]
          Length = 138

 Score = 40.6 bits (93), Expect = 0.17,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 22/62 (35%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   +A N++N DT G++   + F+  +  +        S VA          
Sbjct: 15 ALNLRAQRQEVLAANIANADTPGYQARDIDFASELKKVMQRGRDATSVVALTMTSTQHIP 74

Query: 71 GS 72
            
Sbjct: 75 AQ 76


>gi|332088753|gb|EGI93865.1| flagellar basal-body rod protein FlgB [Shigella boydii 5216-82]
          Length = 138

 Score = 40.6 bits (93), Expect = 0.17,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 22/62 (35%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   +A N++N DT G++   + F+  +  +        S VA          
Sbjct: 15 ALNLRAQRQEVLAANIANADTPGYQARDIDFASELKKVMQRGRDATSVVALTMTSTQHIP 74

Query: 71 GS 72
            
Sbjct: 75 AQ 76


>gi|323976545|gb|EGB71633.1| flagellar hook protein FlgK [Escherichia coli TW10509]
          Length = 547

 Score = 40.6 bits (93), Expect = 0.17,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|300950179|ref|ZP_07164123.1| flagellar hook-associated protein FlgK [Escherichia coli MS
          116-1]
 gi|300450464|gb|EFK14084.1| flagellar hook-associated protein FlgK [Escherichia coli MS
          116-1]
          Length = 547

 Score = 40.6 bits (93), Expect = 0.17,   Method: Composition-based stats.
 Identities = 10/81 (12%), Positives = 26/81 (32%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M +  N  ++   A +  L+T ++N+S+ +  G+        +    +            
Sbjct: 1  MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMEQANSTLGAGGWGGNGVYV 60

Query: 61 SGKEYLSKEVGSFISTGTELD 81
          SG +       +      +  
Sbjct: 61 SGVQREYDAFITNQLRAAQTQ 81


>gi|293408373|ref|ZP_06652212.1| flagellar hook-associated protein FlgK [Escherichia coli B354]
 gi|291471551|gb|EFF14034.1| flagellar hook-associated protein FlgK [Escherichia coli B354]
          Length = 458

 Score = 40.6 bits (93), Expect = 0.17,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 23/78 (29%), Gaps = 2/78 (2%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M    NIG +     +  L+  A N +N  T G+     + S + GA     +   + V 
Sbjct: 1  MD-MINIGYSGASTAQVELNVTAQNTANAMTTGYTRQVAEISTI-GASGGSPNSAGNGVQ 58

Query: 61 SGKEYLSKEVGSFISTGT 78
                            
Sbjct: 59 VDSIRRVSNQYQVNQVWY 76


>gi|56413839|ref|YP_150914.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Paratyphi A str. ATCC 9150]
 gi|197362762|ref|YP_002142399.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Paratyphi A str. AKU_12601]
 gi|56128096|gb|AAV77602.1| putative flagellar basal-body rod protein FlgB (proximal rod
          protein) [Salmonella enterica subsp. enterica serovar
          Paratyphi A str. ATCC 9150]
 gi|197094239|emb|CAR59744.1| putative flagellar basal-body rod protein FlgB (proximal rod
          protein) [Salmonella enterica subsp. enterica serovar
          Paratyphi A str. AKU_12601]
          Length = 138

 Score = 40.6 bits (93), Expect = 0.17,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 26/66 (39%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   +A N++N DT G++   + F+  +  +     ++   VA          
Sbjct: 15 ALNLRAQRQEILAANIANADTPGYQARDIDFTSELKKVMVRGREETGGVALTLTSSHHIP 74

Query: 71 GSFIST 76
             +S+
Sbjct: 75 AQAVSS 80


>gi|323191378|gb|EFZ76640.1| flagellar hook-associated protein FlgK [Escherichia coli RN587/1]
          Length = 458

 Score = 40.6 bits (93), Expect = 0.17,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 23/78 (29%), Gaps = 2/78 (2%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M    NIG +     +  L+  A N +N  T G+     + S + GA     +   + V 
Sbjct: 1  MD-MINIGYSGASTAQVELNVTAQNTANAMTTGYTRQVAEISTI-GASGGSPNSAGNGVQ 58

Query: 61 SGKEYLSKEVGSFISTGT 78
                            
Sbjct: 59 VDSIRRVSNQYQVNQVWY 76


>gi|77464909|ref|YP_354413.1| flagellar basal body rod protein FlgB [Rhodobacter sphaeroides
          2.4.1]
 gi|77389327|gb|ABA80512.1| hypothetical protein RSP_1331 [Rhodobacter sphaeroides 2.4.1]
          Length = 127

 Score = 40.6 bits (93), Expect = 0.17,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 14/44 (31%), Gaps = 1/44 (2%)

Query: 8  GLAAQLALEQRLSTVADNMSNTDTVGFRT-IKVKFSEVVGAIKN 50
            +       R   VA N++N DT G+R      F         
Sbjct: 11 AQSMARHAGLRTEVVAHNLANADTPGYRAQDLPDFESYASGTVG 54


>gi|320107020|ref|YP_004182610.1| flagellar basal-body rod protein FlgC [Terriglobus saanensis
           SP1PR4]
 gi|319925541|gb|ADV82616.1| flagellar basal-body rod protein FlgC [Terriglobus saanensis
           SP1PR4]
          Length = 152

 Score = 40.6 bits (93), Expect = 0.17,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 17/37 (45%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           GF+E  + N + EM  ++  T+ +    T +   +  
Sbjct: 107 GFVEYPDINPLTEMVDLMGATRSYGLNATALQAEKGM 143



 Score = 36.8 bits (83), Expect = 2.8,   Method: Composition-based stats.
 Identities = 10/29 (34%), Positives = 14/29 (48%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTV 32
            +I  +A  A   R   VA NM+N +T 
Sbjct: 6  MMDISASALHAQRVRAEVVATNMANAETT 34


>gi|212709489|ref|ZP_03317617.1| hypothetical protein PROVALCAL_00531 [Providencia alcalifaciens
          DSM 30120]
 gi|212687827|gb|EEB47355.1| hypothetical protein PROVALCAL_00531 [Providencia alcalifaciens
          DSM 30120]
          Length = 137

 Score = 40.6 bits (93), Expect = 0.17,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 25/64 (39%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A    E R + +A N++N DT G++   + F+  +    +    K   ++          
Sbjct: 15 ALSIREARQTVLASNIANADTPGYQARDIDFNRQLQQAMDKGVVKGKGISLAVTAKGHIE 74

Query: 71 GSFI 74
          G  +
Sbjct: 75 GHDM 78


>gi|163758013|ref|ZP_02165101.1| flagellar basal-body rod protein C [Hoeflea phototrophica DFL-43]
 gi|162284302|gb|EDQ34585.1| flagellar basal-body rod protein C [Hoeflea phototrophica DFL-43]
          Length = 142

 Score = 40.6 bits (93), Expect = 0.17,   Method: Composition-based stats.
 Identities = 5/47 (10%), Positives = 19/47 (40%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
           G ++  N N + E+  M    + + +    + +  + +   +  + +
Sbjct: 94  GMVKLPNVNVLVELADMREANRSYEANLQTVKQTRELVSMTLDLLRA 140



 Score = 39.1 bits (89), Expect = 0.55,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 20/43 (46%), Gaps = 7/43 (16%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFS 42
          I  +     E R+  +++N++N+ + G       +R   + FS
Sbjct: 13 IASSGLDVQETRMRILSENLANSQSTGDTPGADAYRRKTISFS 55


>gi|119947179|ref|YP_944859.1| flagellar basal-body rod protein FlgC [Psychromonas ingrahamii 37]
 gi|119865783|gb|ABM05260.1| flagellar basal-body rod protein FlgC [Psychromonas ingrahamii 37]
          Length = 142

 Score = 40.6 bits (93), Expect = 0.17,   Method: Composition-based stats.
 Identities = 6/40 (15%), Positives = 16/40 (40%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           S  + + EM  M+  ++ F     +++  +      I  +
Sbjct: 101 SGIDVVSEMADMMSASRSFEMNVEVLNNAKSMQQSLISVL 140



 Score = 36.0 bits (81), Expect = 4.7,   Method: Composition-based stats.
 Identities = 15/87 (17%), Positives = 29/87 (33%), Gaps = 6/87 (6%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQK 55
          Q  F    +A  A   RL+T++ N++N D+        F+ +K  F+ +   + N     
Sbjct: 4  QQIFLTAGSAMTAQTVRLNTISSNLANADSFSGNKEDVFKPLKPIFATIYNNMNNGSASN 63

Query: 56 ISFVASGKEYLSKEVGSFISTGTELDF 82
          I         +              + 
Sbjct: 64 IRSAQVMVADVIATDSLTQQRHEPENP 90


>gi|229096229|ref|ZP_04227202.1| Flagellar basal-body rod protein [Bacillus cereus Rock3-29]
 gi|228687189|gb|EEL41094.1| Flagellar basal-body rod protein [Bacillus cereus Rock3-29]
          Length = 138

 Score = 40.6 bits (93), Expect = 0.17,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 28/72 (38%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
             L  + +TV+ N++N +T G++   V F+E +           + + S  +       
Sbjct: 15 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMSKSSALYKNNAADLKSNPDLYQTNEM 74

Query: 72 SFISTGTELDFA 83
             +   +  +A
Sbjct: 75 HLPTVNMKNTYA 86


>gi|224373714|ref|YP_002608086.1| flagellar basal body rod protein FlgB [Nautilia profundicola AmH]
 gi|223588710|gb|ACM92446.1| flagellar basal-body rod protein FlgB [Nautilia profundicola AmH]
          Length = 143

 Score = 40.6 bits (93), Expect = 0.17,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50
          R   +A N++N DT  +R   ++F E + A  +
Sbjct: 22 RQDMIASNIANADTPYYRPKDIRFEEALQAEVD 54


>gi|207091983|ref|ZP_03239770.1| flagellar basal body rod protein FlgC [Helicobacter pylori
          HPKX_438_AG0C1]
          Length = 89

 Score = 40.6 bits (93), Expect = 0.17,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 6/49 (12%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44
           +SF+I      A   R + ++ N++N +T     G  +R  +  F   
Sbjct: 3  LSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFKAF 51


>gi|221199736|ref|ZP_03572779.1| flagellar basal-body rod protein FlgB [Burkholderia multivorans
          CGD2M]
 gi|221208659|ref|ZP_03581659.1| flagellar basal-body rod protein FlgB [Burkholderia multivorans
          CGD2]
 gi|221215568|ref|ZP_03588531.1| flagellar basal-body rod protein FlgB [Burkholderia multivorans
          CGD1]
 gi|221164556|gb|EED97039.1| flagellar basal-body rod protein FlgB [Burkholderia multivorans
          CGD1]
 gi|221171470|gb|EEE03917.1| flagellar basal-body rod protein FlgB [Burkholderia multivorans
          CGD2]
 gi|221179975|gb|EEE12379.1| flagellar basal-body rod protein FlgB [Burkholderia multivorans
          CGD2M]
          Length = 162

 Score = 40.6 bits (93), Expect = 0.17,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 18/43 (41%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
          A      R   ++ N++N DT G+R   V F+  +       +
Sbjct: 15 ALDVRAYRQELLSSNIANADTPGYRARDVDFASTLARSLKQAN 57


>gi|94500238|ref|ZP_01306771.1| flagellar basal body rod protein [Oceanobacter sp. RED65]
 gi|94427537|gb|EAT12514.1| flagellar basal body rod protein [Oceanobacter sp. RED65]
          Length = 131

 Score = 40.6 bits (93), Expect = 0.17,   Method: Composition-based stats.
 Identities = 10/71 (14%), Positives = 28/71 (39%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTG 77
          R   +A+N++N DT  ++   + F+ ++    +     +          ++ V   +   
Sbjct: 23 RAEILANNLANADTPHYKARDIDFNAMLDGAMSSRSIGMEKTHKAHISGNQSVDDSLKYR 82

Query: 78 TELDFALEGDA 88
               A++G+ 
Sbjct: 83 NPYQPAIDGNT 93


>gi|16760050|ref|NP_455667.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Typhi str. CT18]
 gi|29142179|ref|NP_805521.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Typhi str. Ty2]
 gi|213161847|ref|ZP_03347557.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Typhi str. E00-7866]
 gi|213424677|ref|ZP_03357442.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Typhi str. E02-1180]
 gi|213582034|ref|ZP_03363860.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Typhi str. E98-0664]
 gi|213615929|ref|ZP_03371755.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Typhi str. E98-2068]
 gi|213648923|ref|ZP_03378976.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Typhi str. J185]
 gi|213865508|ref|ZP_03387627.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Typhi str. M223]
 gi|289828583|ref|ZP_06546408.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Typhi str. E98-3139]
 gi|291084685|ref|ZP_06540939.2| flagellar basal body rod protein FlgB [Salmonella enterica subsp.
          enterica serovar Typhi str. AG3]
 gi|25298905|pir||AG0639 probable flagellar basal-body rod protein FlgB (proximal rod
          protein) STY1213 [imported] - Salmonella enterica
          subsp. enterica serovar Typhi (strain CT18)
 gi|16502344|emb|CAD08298.1| putative flagellar basal-body rod protein FlgB (proximal rod
          protein) [Salmonella enterica subsp. enterica serovar
          Typhi]
 gi|29137809|gb|AAO69370.1| putative flagellar basal-body rod protein FlgB [Salmonella
          enterica subsp. enterica serovar Typhi str. Ty2]
          Length = 138

 Score = 40.6 bits (93), Expect = 0.17,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 26/66 (39%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   +A N++N DT G++   + F+  +  +     ++   VA          
Sbjct: 15 ALNLRAQRQEILAANIANADTPGYQARDIDFASELKKVMVRGREETGGVALSLTSSRHIP 74

Query: 71 GSFIST 76
             +S+
Sbjct: 75 AQAVSS 80


>gi|312884837|ref|ZP_07744529.1| flagellar basal body rod protein FlgB [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309367489|gb|EFP95049.1| flagellar basal body rod protein FlgB [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 120

 Score = 40.6 bits (93), Expect = 0.17,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 31/85 (36%), Gaps = 1/85 (1%)

Query: 17  QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76
           QR   +A N++N DT G+    + F+ VV  + +    K       +   S    +    
Sbjct: 21  QRTKVLASNLANVDTPGYLAKDLSFATVVSQVSSQGVDKPIPKLDIQSQYSVPYQNSK-N 79

Query: 77  GTELDFALEGDAWFALESPRGIILT 101
           G  ++  +E   +          LT
Sbjct: 80  GNTVELGVEQGKFTQNNMDFQTSLT 104


>gi|229195956|ref|ZP_04322709.1| Flagellar basal-body rod protein [Bacillus cereus m1293]
 gi|228587515|gb|EEK45580.1| Flagellar basal-body rod protein [Bacillus cereus m1293]
          Length = 135

 Score = 40.6 bits (93), Expect = 0.17,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 28/72 (38%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
             L  + +TV+ N++N +T G++   V F+E +           + + +  +       
Sbjct: 12 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKSNTADLKTNADLYQTNEM 71

Query: 72 SFISTGTELDFA 83
             +   +  +A
Sbjct: 72 HLPTVNAKNTYA 83


>gi|170768131|ref|ZP_02902584.1| flagellar hook-associated protein FlgK [Escherichia albertii
          TW07627]
 gi|170122897|gb|EDS91828.1| flagellar hook-associated protein FlgK [Escherichia albertii
          TW07627]
          Length = 547

 Score = 40.6 bits (93), Expect = 0.18,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQAKSTLGAGG 52


>gi|167623358|ref|YP_001673652.1| flagellar basal body rod protein FlgB [Shewanella halifaxensis
          HAW-EB4]
 gi|167353380|gb|ABZ75993.1| flagellar basal-body rod protein FlgB [Shewanella halifaxensis
          HAW-EB4]
          Length = 132

 Score = 40.6 bits (93), Expect = 0.18,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 25/59 (42%)

Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFI 74
           QR   ++ N++N DT  ++   V FS+ +GA ++         +  K +    +    
Sbjct: 20 SQRAEVLSSNIANADTPNYKARDVDFSKAMGAAQSQQSGLAMTKSDTKHFDMAALTQQH 78


>gi|229121295|ref|ZP_04250526.1| Flagellar basal-body rod protein [Bacillus cereus 95/8201]
 gi|228662140|gb|EEL17749.1| Flagellar basal-body rod protein [Bacillus cereus 95/8201]
          Length = 135

 Score = 40.6 bits (93), Expect = 0.18,   Method: Composition-based stats.
 Identities = 10/32 (31%), Positives = 19/32 (59%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
             L  + +TV+ N++N +T G++   V F+E
Sbjct: 12 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAE 43


>gi|206890640|ref|YP_002248112.1| flagellar basal-body rod protein FlgB [Thermodesulfovibrio
           yellowstonii DSM 11347]
 gi|206742578|gb|ACI21635.1| flagellar basal-body rod protein FlgB [Thermodesulfovibrio
           yellowstonii DSM 11347]
          Length = 111

 Score = 40.6 bits (93), Expect = 0.18,   Method: Composition-based stats.
 Identities = 14/102 (13%), Positives = 31/102 (30%), Gaps = 3/102 (2%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M  S  I          R   +A N++N DT  ++   + F E +       + +   + 
Sbjct: 1   MDKSIKILEKVMDICTYRQKILASNIANADTPNYKAKDINFQEELKKAAESHNAEYKVIE 60

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTR 102
           +     +++  +          A   +          +  TR
Sbjct: 61  APTTMPNRDGNTVNIEVEMTKLA---ETMLMYNGATQLFSTR 99


>gi|330830297|ref|YP_004393249.1| flagellar hook-associated protein FlgK [Aeromonas veronii B565]
 gi|328805433|gb|AEB50632.1| Flagellar hook-associated protein FlgK [Aeromonas veronii B565]
          Length = 667

 Score = 40.6 bits (93), Expect = 0.18,   Method: Composition-based stats.
 Identities = 9/35 (25%), Positives = 19/35 (54%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39
            IG +  LA ++ L T ++N+ N ++ G+   + 
Sbjct: 6  LGIGSSGVLAQQRLLQTTSNNIVNVNSQGYVRERT 40


>gi|228984827|ref|ZP_04144999.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
          tochigiensis BGSC 4Y1]
 gi|228775025|gb|EEM23419.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
          tochigiensis BGSC 4Y1]
          Length = 135

 Score = 40.6 bits (93), Expect = 0.18,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 29/72 (40%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
             L  + +TV+ N++N +T G++   V F+E +           + + S  +       
Sbjct: 12 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNEM 71

Query: 72 SFISTGTELDFA 83
             +  T+  +A
Sbjct: 72 HLPTVNTKNTYA 83


>gi|163742564|ref|ZP_02149950.1| flagellar hook-associated protein K [Phaeobacter gallaeciensis
           2.10]
 gi|161384149|gb|EDQ08532.1| flagellar hook-associated protein K [Phaeobacter gallaeciensis
           2.10]
          Length = 472

 Score = 40.6 bits (93), Expect = 0.18,   Method: Composition-based stats.
 Identities = 20/175 (11%), Positives = 53/175 (30%), Gaps = 3/175 (1%)

Query: 67  SKEVGSFISTGTELDFALEGDA--WFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVL 124
             +  +   T T  D  +  D   +F   +  GI    +   K+   G   +   +  + 
Sbjct: 298 RFQDPALDPTLTATDPGIFTDQGAFFDPANTVGIANRIELNDKIAMQGQAETWRLRDGLN 357

Query: 125 DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT 184
             +            +      + +     + T  L +  +S   + R     +      
Sbjct: 358 AASPGNAGDATLLRGYADALDAKRTVSSVGLGTANLDASTLSANLLSRFAQSKNSAEQNV 417

Query: 185 PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
                +   + +  L     +S  E+  +I + + + +   +I   ++ M   +R
Sbjct: 418 AFAAATYTEMYQRELAQG-VDSDAELQNLIVIEKVYQANARMISVVDELMETLLR 471



 Score = 34.8 bits (78), Expect = 9.2,   Method: Composition-based stats.
 Identities = 15/87 (17%), Positives = 28/87 (32%), Gaps = 5/87 (5%)

Query: 9  LAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSK 68
          +    A  +  S V++N+SN  T G+         +      D    +      +     
Sbjct: 1  MTGLTAAGRSTSVVSENLSNVLTPGYSR-----RSLALTSAGDGFSGVKVGHVQRINDPA 55

Query: 69 EVGSFISTGTELDFALEGDAWFALESP 95
             S  S  +E+  A    A+F   + 
Sbjct: 56 LQSSVRSANSEVGVAEVKSAFFGRMTE 82


>gi|294140181|ref|YP_003556159.1| flagellar basal-body rod protein FlgB [Shewanella violacea DSS12]
 gi|293326650|dbj|BAJ01381.1| flagellar basal-body rod protein FlgB [Shewanella violacea DSS12]
          Length = 132

 Score = 40.6 bits (93), Expect = 0.18,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 23/66 (34%), Gaps = 2/66 (3%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
             A   R   +A N++N DT  ++   V F + + A  +         +  + +  + +
Sbjct: 17 GIRAQ--RAEVIASNIANADTPHYKARDVNFDKALQAASSRQGGLAMSSSDSRHFDLEAL 74

Query: 71 GSFIST 76
                
Sbjct: 75 SQQNYG 80


>gi|262273532|ref|ZP_06051346.1| flagellar basal-body rod protein FlgB [Grimontia hollisae CIP
           101886]
 gi|262222510|gb|EEY73821.1| flagellar basal-body rod protein FlgB [Grimontia hollisae CIP
           101886]
          Length = 124

 Score = 40.6 bits (93), Expect = 0.19,   Method: Composition-based stats.
 Identities = 13/104 (12%), Positives = 34/104 (32%)

Query: 17  QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76
           QR   +A N++N DT  ++   + F + + +I +             ++ + +    +  
Sbjct: 21  QRAKVIAGNLANVDTPNYKARDISFEQAMDSIASRARMNHIQRRDVSQHYTLQYREPMQP 80

Query: 77  GTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
             + +    G              T      +  +G   +  G+
Sbjct: 81  SQDGNTVELGVEQAKFAENAMAFETSMTFLNMKLNGLREAIKGQ 124


>gi|119899030|ref|YP_934243.1| flagellar basal-body rod protein FlgB [Azoarcus sp. BH72]
 gi|119671443|emb|CAL95356.1| flagellar basal-body rod protein FlgB [Azoarcus sp. BH72]
          Length = 133

 Score = 40.6 bits (93), Expect = 0.19,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 16/41 (39%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50
           A      R   +A N++N DT  ++   + F E +     
Sbjct: 14 TALNLQAHRQQLLASNIANADTPHYKARDIDFREALQGALG 54


>gi|218704490|ref|YP_002412009.1| flagellar hook-associated protein FlgK [Escherichia coli UMN026]
 gi|293404366|ref|ZP_06648360.1| flgK [Escherichia coli FVEC1412]
 gi|298380146|ref|ZP_06989751.1| flagellar hook-associated protein 1 [Escherichia coli FVEC1302]
 gi|300899601|ref|ZP_07117840.1| flagellar hook-associated protein FlgK [Escherichia coli MS
          198-1]
 gi|218431587|emb|CAR12466.1| flagellar hook-filament junction protein 1 [Escherichia coli
          UMN026]
 gi|291428952|gb|EFF01977.1| flgK [Escherichia coli FVEC1412]
 gi|298279844|gb|EFI21352.1| flagellar hook-associated protein 1 [Escherichia coli FVEC1302]
 gi|300356872|gb|EFJ72742.1| flagellar hook-associated protein FlgK [Escherichia coli MS
          198-1]
          Length = 547

 Score = 40.6 bits (93), Expect = 0.19,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMTQANSTLGAGG 52


>gi|91210225|ref|YP_540211.1| flagellar basal body rod protein FlgB [Escherichia coli UTI89]
 gi|215486282|ref|YP_002328713.1| flagellar basal body rod protein FlgB [Escherichia coli O127:H6
          str. E2348/69]
 gi|218557955|ref|YP_002390868.1| flagellar basal body rod protein FlgB [Escherichia coli S88]
 gi|237706941|ref|ZP_04537422.1| flagellar basal body rod protein FlgB [Escherichia sp. 3_2_53FAA]
 gi|312968853|ref|ZP_07783060.1| flagellar basal-body rod protein FlgB [Escherichia coli 2362-75]
 gi|331646331|ref|ZP_08347434.1| flagellar basal-body rod protein FlgB [Escherichia coli M605]
 gi|331657135|ref|ZP_08358097.1| flagellar basal-body rod protein FlgB [Escherichia coli TA206]
 gi|91071799|gb|ABE06680.1| cell-proximal portion of basal-body rod FlgB [Escherichia coli
          UTI89]
 gi|215264354|emb|CAS08711.1| flagellar component of cell-proximal portion of basal-body rod
          [Escherichia coli O127:H6 str. E2348/69]
 gi|218364724|emb|CAR02414.1| flagellar component of cell-proximal portion of basal-body rod
          [Escherichia coli S88]
 gi|222032826|emb|CAP75565.1| flagellar basal-body rod protein flgB [Escherichia coli LF82]
 gi|226898151|gb|EEH84410.1| flagellar basal body rod protein FlgB [Escherichia sp. 3_2_53FAA]
 gi|294489848|gb|ADE88604.1| flagellar basal-body rod protein FlgB [Escherichia coli IHE3034]
 gi|307627457|gb|ADN71761.1| flagellar basal body rod protein FlgB [Escherichia coli UM146]
 gi|312286255|gb|EFR14168.1| flagellar basal-body rod protein FlgB [Escherichia coli 2362-75]
 gi|312945635|gb|ADR26462.1| flagellar basal body rod protein FlgB [Escherichia coli O83:H1
          str. NRG 857C]
 gi|315287372|gb|EFU46783.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 110-3]
 gi|320196445|gb|EFW71068.1| Flagellar basal-body rod protein FlgB [Escherichia coli
          WV_060327]
 gi|323190585|gb|EFZ75857.1| flagellar basal-body rod protein FlgB [Escherichia coli RN587/1]
 gi|323957897|gb|EGB53609.1| flagellar basal-body rod protein FlgB [Escherichia coli H263]
 gi|330910887|gb|EGH39397.1| flagellar basal-body rod protein FlgB [Escherichia coli AA86]
 gi|331045083|gb|EGI17210.1| flagellar basal-body rod protein FlgB [Escherichia coli M605]
 gi|331055383|gb|EGI27392.1| flagellar basal-body rod protein FlgB [Escherichia coli TA206]
          Length = 138

 Score = 40.6 bits (93), Expect = 0.19,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 22/62 (35%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   +A N++N DT G++   + F+  +  +        S VA          
Sbjct: 15 ALNLRAQRQEVLAANIANADTPGYQARDIDFASELKKVMQRGRDATSVVALTMTSTKHIP 74

Query: 71 GS 72
            
Sbjct: 75 AQ 76


>gi|78067830|ref|YP_370599.1| flagellar hook-associated protein FlgK [Burkholderia sp. 383]
 gi|77968575|gb|ABB09955.1| conserved hypothetical protein [Burkholderia sp. 383]
          Length = 660

 Score = 40.6 bits (93), Expect = 0.19,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 26/80 (32%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           T  N+G++   A    L+T  +N+SN  T G+   +  ++E                  
Sbjct: 3  NTLMNLGVSGLNAALWGLTTTGNNISNAATPGYSVQRPVYAEASSQYSGSGYMPQGVNTV 62

Query: 62 GKEYLSKEVGSFISTGTELD 81
            +    +  S      +  
Sbjct: 63 TVQRQYSQYLSDQLNTAQTQ 82



 Score = 34.8 bits (78), Expect = 10.0,   Method: Composition-based stats.
 Identities = 4/37 (10%), Positives = 12/37 (32%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  ++  E   ++   Q + +   +I          +
Sbjct: 620 SGVSTNEEAANLMQYQQFYQANAKVIQTAATLFQTVL 656


>gi|301023269|ref|ZP_07187066.1| flagellar hook-associated protein FlgK [Escherichia coli MS 69-1]
 gi|300397114|gb|EFJ80652.1| flagellar hook-associated protein FlgK [Escherichia coli MS 69-1]
          Length = 547

 Score = 40.6 bits (93), Expect = 0.19,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMTQANSTLGAGG 52


>gi|260772271|ref|ZP_05881187.1| flagellar basal-body rod protein FlgB [Vibrio metschnikovii CIP
          69.14]
 gi|260611410|gb|EEX36613.1| flagellar basal-body rod protein FlgB [Vibrio metschnikovii CIP
          69.14]
          Length = 131

 Score = 40.6 bits (93), Expect = 0.19,   Method: Composition-based stats.
 Identities = 7/37 (18%), Positives = 17/37 (45%)

Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
          +    +A N++ ++T GF+   + F   + A  +   
Sbjct: 21 RNAEVIATNIAQSNTPGFKAKGMDFDRALKAASSGAS 57


>gi|229017031|ref|ZP_04173951.1| Flagellar basal-body rod protein [Bacillus cereus AH1273]
 gi|229023212|ref|ZP_04179723.1| Flagellar basal-body rod protein [Bacillus cereus AH1272]
 gi|228738137|gb|EEL88622.1| Flagellar basal-body rod protein [Bacillus cereus AH1272]
 gi|228744302|gb|EEL94384.1| Flagellar basal-body rod protein [Bacillus cereus AH1273]
          Length = 177

 Score = 40.6 bits (93), Expect = 0.19,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 29/72 (40%)

Query: 12  QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
              L  + +TV+ N++N +T G++   V F+E +        +  + + S  +       
Sbjct: 54  MNYLVTKRNTVSSNIANANTPGYKAQGVTFAEQMNMNNPLFKKNAADLKSNSDLYQTNEM 113

Query: 72  SFISTGTELDFA 83
              +   +  +A
Sbjct: 114 HLPTANMKNTYA 125


>gi|161526189|ref|YP_001581201.1| flagellar basal body rod protein FlgB [Burkholderia multivorans
          ATCC 17616]
 gi|189349095|ref|YP_001944723.1| flagellar basal body rod protein FlgB [Burkholderia multivorans
          ATCC 17616]
 gi|160343618|gb|ABX16704.1| flagellar basal-body rod protein FlgB [Burkholderia multivorans
          ATCC 17616]
 gi|189333117|dbj|BAG42187.1| flagellar basal-body rod protein [Burkholderia multivorans ATCC
          17616]
          Length = 162

 Score = 40.6 bits (93), Expect = 0.19,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 18/43 (41%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
          A      R   ++ N++N DT G+R   V F+  +       +
Sbjct: 15 ALDVRAYRQELLSSNIANADTPGYRARDVDFASTLAHSLKQAN 57


>gi|323139651|ref|ZP_08074693.1| flagellar basal body rod protein FlgB [Methylocystis sp. ATCC
          49242]
 gi|322395083|gb|EFX97642.1| flagellar basal body rod protein FlgB [Methylocystis sp. ATCC
          49242]
          Length = 126

 Score = 40.6 bits (93), Expect = 0.19,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 1/67 (1%)

Query: 15 LEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIKNDIDQKISFVASGKEYLSKEVGSF 73
          L  R S VA N++N+DT G+R   V  F+ V+ +   ++           +  +    + 
Sbjct: 17 LSTRQSLVAQNIANSDTPGYRARDVMPFARVMESSALEMAGSNPLHMHPSQSEAYAAATK 76

Query: 74 ISTGTEL 80
           + G E 
Sbjct: 77 PTDGWET 83


>gi|332525060|ref|ZP_08401240.1| flagellar hook-associated protein FlgK [Rubrivivax
          benzoatilyticus JA2]
 gi|332108349|gb|EGJ09573.1| flagellar hook-associated protein FlgK [Rubrivivax
          benzoatilyticus JA2]
          Length = 659

 Score = 40.6 bits (93), Expect = 0.20,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 18/48 (37%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
           ++G+ A  A    +     N+SN +  G+   + + +   G      
Sbjct: 1  MSLGMRAMTASYASMQVTGHNISNANVPGYSRQQAELATAKGQYTGAG 48



 Score = 38.7 bits (88), Expect = 0.81,   Method: Composition-based stats.
 Identities = 6/41 (14%), Positives = 15/41 (36%)

Query: 200 EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
           E S  N   E  ++I   Q + +   ++   +      ++ 
Sbjct: 616 EVSGVNLDEEAARLIQYQQSYQAAAKVLQVAQSVFETLLQT 656


>gi|218689026|ref|YP_002397238.1| flagellar basal body rod protein FlgB [Escherichia coli ED1a]
 gi|218426590|emb|CAR07418.1| flagellar component of cell-proximal portion of basal-body rod
          [Escherichia coli ED1a]
 gi|324007913|gb|EGB77132.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 57-2]
          Length = 138

 Score = 40.6 bits (93), Expect = 0.20,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 22/62 (35%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   +A N++N DT G++   + F+  +  +        S VA          
Sbjct: 15 ALNLRAQRQEVLAANIANADTPGYQARDIDFASELKKVMQRGRDATSVVALTMTSTKHIP 74

Query: 71 GS 72
            
Sbjct: 75 AQ 76


>gi|117623259|ref|YP_852172.1| flagellar basal body rod protein FlgB [Escherichia coli APEC O1]
 gi|115512383|gb|ABJ00458.1| cell-proximal portion of basal-body rod FlgB [Escherichia coli
          APEC O1]
 gi|323953241|gb|EGB49107.1| flagellar basal-body rod protein FlgB [Escherichia coli H252]
          Length = 138

 Score = 40.6 bits (93), Expect = 0.20,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 22/62 (35%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   +A N++N DT G++   + F+  +  +        S VA          
Sbjct: 15 ALNLRAQRQEVLAANIANADTPGYQARDIDFASELKKVMQRGRDATSVVALTMTSTKHIP 74

Query: 71 GS 72
            
Sbjct: 75 AQ 76


>gi|323947625|gb|EGB43629.1| flagellar basal-body rod protein FlgB [Escherichia coli H120]
          Length = 138

 Score = 40.6 bits (93), Expect = 0.20,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 22/62 (35%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   +A N++N DT G++   + F+  +  +        S VA          
Sbjct: 15 ALNLRAQRQEVLAANIANADTPGYQARDIDFASELKKVMQRGRDATSVVALTMTSTQHIP 74

Query: 71 GS 72
            
Sbjct: 75 AQ 76


>gi|218896676|ref|YP_002445087.1| flagellar basal-body rod protein FlgB [Bacillus cereus G9842]
 gi|218543629|gb|ACK96023.1| flagellar basal-body rod protein FlgB [Bacillus cereus G9842]
          Length = 135

 Score = 40.6 bits (93), Expect = 0.20,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 28/72 (38%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
             L  + +TV+ N++N +T G++   V F+E +           + + S  +       
Sbjct: 12 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNEM 71

Query: 72 SFISTGTELDFA 83
             +   +  +A
Sbjct: 72 HLPTVNMKNTYA 83


>gi|196045109|ref|ZP_03112342.1| flagellar basal-body rod protein FlgB [Bacillus cereus 03BB108]
 gi|218902858|ref|YP_002450692.1| flagellar basal-body rod protein FlgB [Bacillus cereus AH820]
 gi|228945346|ref|ZP_04107701.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
          monterrey BGSC 4AJ1]
 gi|300117338|ref|ZP_07055128.1| flagellar basal body rod protein FlgB [Bacillus cereus SJ1]
 gi|301053280|ref|YP_003791491.1| flagellar basal body rod protein [Bacillus anthracis CI]
 gi|196024111|gb|EDX62785.1| flagellar basal-body rod protein FlgB [Bacillus cereus 03BB108]
 gi|218535408|gb|ACK87806.1| flagellar basal-body rod protein FlgB [Bacillus cereus AH820]
 gi|228814318|gb|EEM60584.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
          monterrey BGSC 4AJ1]
 gi|298725173|gb|EFI65825.1| flagellar basal body rod protein FlgB [Bacillus cereus SJ1]
 gi|300375449|gb|ADK04353.1| flagellar basal body rod protein [Bacillus cereus biovar
          anthracis str. CI]
          Length = 135

 Score = 40.6 bits (93), Expect = 0.20,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 29/72 (40%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
             L  + +TV+ N++N +T G++   V F+E +           + + S  +       
Sbjct: 12 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNEM 71

Query: 72 SFISTGTELDFA 83
             +  T+  +A
Sbjct: 72 HLPTVNTKNTYA 83


>gi|148980304|ref|ZP_01815991.1| flagellar basal-body rod protein C [Vibrionales bacterium SWAT-3]
 gi|145961323|gb|EDK26633.1| flagellar basal-body rod protein C [Vibrionales bacterium SWAT-3]
          Length = 142

 Score = 40.6 bits (93), Expect = 0.20,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 17/41 (41%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
           G++  S  N + EM  MI  T+ F +   ++   +      
Sbjct: 96  GYVYYSGINVVNEMADMISATRSFEASVEVLGNVKSMQQSL 136



 Score = 37.9 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/96 (15%), Positives = 31/96 (32%), Gaps = 7/96 (7%)

Query: 4   SFN-IGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56
                  +A  A   RL+T++ N++N D+V       ++ +K  FS V         Q+ 
Sbjct: 5   GIYETAGSAMSAQTVRLNTISSNLANADSVSGDPSQVYKPLKPIFSAVYNHFNAQQTQQQ 64

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL 92
             V      + +            +     + +   
Sbjct: 65  GVVPIRIADVVEVSSMMEGRYEPNNPLSNDEGYVYY 100


>gi|119503641|ref|ZP_01625724.1| Flagellar basal-body rod protein FlgB [marine gamma
          proteobacterium HTCC2080]
 gi|119460703|gb|EAW41795.1| Flagellar basal-body rod protein FlgB [marine gamma
          proteobacterium HTCC2080]
          Length = 133

 Score = 40.6 bits (93), Expect = 0.20,   Method: Composition-based stats.
 Identities = 10/79 (12%), Positives = 26/79 (32%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
            +  I         QR++ ++ N++N +T  ++   + F   +    N  +        
Sbjct: 5  DNALGISPQVLALRSQRMNLLSANIANAETPNYKARDIDFRAAMTQASNSQESTQLRATQ 64

Query: 62 GKEYLSKEVGSFISTGTEL 80
           K     E    + +  + 
Sbjct: 65 AKHMTGFESQLGVESDIKY 83


>gi|27378814|ref|NP_770343.1| flagellar hook-associated protein [Bradyrhizobium japonicum USDA
          110]
 gi|27351963|dbj|BAC48968.1| flaN [Bradyrhizobium japonicum USDA 110]
          Length = 582

 Score = 40.6 bits (93), Expect = 0.20,   Method: Composition-based stats.
 Identities = 9/28 (32%), Positives = 16/28 (57%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTVGF 34
          I  +   A + ++S  + N+SN DT G+
Sbjct: 9  IAFSGLSATQVQISVTSSNISNADTTGY 36


>gi|283955071|ref|ZP_06372574.1| flagellar hook-associated protein FlgK, putative [Campylobacter
          jejuni subsp. jejuni 414]
 gi|283793438|gb|EFC32204.1| flagellar hook-associated protein FlgK, putative [Campylobacter
          jejuni subsp. jejuni 414]
          Length = 608

 Score = 40.6 bits (93), Expect = 0.20,   Method: Composition-based stats.
 Identities = 8/36 (22%), Positives = 18/36 (50%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
           + G+    A E +++T  +N+SN +   +   +V 
Sbjct: 7  LHTGVTGLKASEVQIATTGNNISNANATFYTRQRVV 42



 Score = 37.5 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 5/48 (10%), Positives = 17/48 (35%)

Query: 191 GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
             +V   +   S  N+  E+  +I     + +   ++    + +   +
Sbjct: 557 YNSVYSEYQSKSGVNTNEELAALIQYQSSYGAAAKIVSTVNQMLDTLL 604


>gi|229155314|ref|ZP_04283425.1| Flagellar basal-body rod protein [Bacillus cereus ATCC 4342]
 gi|228628239|gb|EEK84955.1| Flagellar basal-body rod protein [Bacillus cereus ATCC 4342]
          Length = 135

 Score = 40.6 bits (93), Expect = 0.20,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 20/34 (58%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV 45
             L  + +TV+ N++N +T G++   V F+E +
Sbjct: 12 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQM 45


>gi|138894737|ref|YP_001125190.1| flagellar basal body rod protein FlgB [Geobacillus
          thermodenitrificans NG80-2]
 gi|134266250|gb|ABO66445.1| Flagellar basal-body rod protein [Geobacillus thermodenitrificans
          NG80-2]
          Length = 129

 Score = 40.6 bits (93), Expect = 0.20,   Method: Composition-based stats.
 Identities = 9/33 (27%), Positives = 15/33 (45%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
                 R   +ADN++N DT G +   ++F  
Sbjct: 14 GLRYASLRQQAIADNIANVDTPGCKAKDIRFQA 46


>gi|115523570|ref|YP_780481.1| flagellar basal body rod protein FlgB [Rhodopseudomonas palustris
          BisA53]
 gi|115517517|gb|ABJ05501.1| flagellar basal body rod protein [Rhodopseudomonas palustris
          BisA53]
          Length = 136

 Score = 40.6 bits (93), Expect = 0.20,   Method: Composition-based stats.
 Identities = 8/26 (30%), Positives = 15/26 (57%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFR 35
                ++R   +ADN++N+DT  F+
Sbjct: 14 TRMQWHQERQRVLADNIANSDTPAFK 39


>gi|30261742|ref|NP_844119.1| flagellar basal body rod protein FlgB [Bacillus anthracis str.
          Ames]
 gi|47526962|ref|YP_018311.1| flagellar basal body rod protein FlgB [Bacillus anthracis str.
          'Ames Ancestor']
 gi|49184572|ref|YP_027824.1| flagellar basal body rod protein FlgB [Bacillus anthracis str.
          Sterne]
 gi|65319011|ref|ZP_00391970.1| COG1815: Flagellar basal body protein [Bacillus anthracis str.
          A2012]
 gi|165869479|ref|ZP_02214138.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
          A0488]
 gi|167633168|ref|ZP_02391493.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
          A0442]
 gi|167639175|ref|ZP_02397448.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
          A0193]
 gi|170686191|ref|ZP_02877413.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
          A0465]
 gi|170706512|ref|ZP_02896972.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
          A0389]
 gi|177650628|ref|ZP_02933595.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
          A0174]
 gi|190566366|ref|ZP_03019284.1| flagellar basal-body rod protein FlgB [Bacillus anthracis
          Tsiankovskii-I]
 gi|227815499|ref|YP_002815508.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
          CDC 684]
 gi|229601762|ref|YP_002866142.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
          A0248]
 gi|254683232|ref|ZP_05147093.1| flagellar basal body rod protein FlgB [Bacillus anthracis str.
          CNEVA-9066]
 gi|254723820|ref|ZP_05185606.1| flagellar basal body rod protein FlgB [Bacillus anthracis str.
          A1055]
 gi|254734584|ref|ZP_05192296.1| flagellar basal body rod protein FlgB [Bacillus anthracis str.
          Western North America USA6153]
 gi|254740993|ref|ZP_05198681.1| flagellar basal body rod protein FlgB [Bacillus anthracis str.
          Kruger B]
 gi|254755236|ref|ZP_05207270.1| flagellar basal body rod protein FlgB [Bacillus anthracis str.
          Vollum]
 gi|254759772|ref|ZP_05211796.1| flagellar basal body rod protein FlgB [Bacillus anthracis str.
          Australia 94]
 gi|30255970|gb|AAP25605.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
          Ames]
 gi|47502110|gb|AAT30786.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
          'Ames Ancestor']
 gi|49178499|gb|AAT53875.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
          Sterne]
 gi|164714919|gb|EDR20437.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
          A0488]
 gi|167512965|gb|EDR88338.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
          A0193]
 gi|167531206|gb|EDR93884.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
          A0442]
 gi|170128610|gb|EDS97477.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
          A0389]
 gi|170669888|gb|EDT20629.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
          A0465]
 gi|172083772|gb|EDT68832.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
          A0174]
 gi|190562501|gb|EDV16468.1| flagellar basal-body rod protein FlgB [Bacillus anthracis
          Tsiankovskii-I]
 gi|227006070|gb|ACP15813.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
          CDC 684]
 gi|229266170|gb|ACQ47807.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str.
          A0248]
          Length = 135

 Score = 40.6 bits (93), Expect = 0.20,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 29/72 (40%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
             L  + +TV+ N++N +T G++   V F+E +           + + S  +       
Sbjct: 12 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNEM 71

Query: 72 SFISTGTELDFA 83
             +  T+  +A
Sbjct: 72 HVPTVNTKNTYA 83


>gi|300696910|ref|YP_003747571.1| flagellar component of cell-proximal portion of basal-body rod,
           protein flgb [Ralstonia solanacearum CFBP2957]
 gi|299073634|emb|CBJ53154.1| flagellar component of cell-proximal portion of basal-body rod,
           protein flgb [Ralstonia solanacearum CFBP2957]
          Length = 153

 Score = 40.6 bits (93), Expect = 0.20,   Method: Composition-based stats.
 Identities = 17/121 (14%), Positives = 35/121 (28%), Gaps = 3/121 (2%)

Query: 11  AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
           A     QR   +A N++N DT  ++     F   +             + +         
Sbjct: 15  ALRLRSQRHQLLASNIANADTPSYKARDFDFQSALQKATGQQSGSSLPMTATAAGHLTAA 74

Query: 71  GSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVP 130
           G+  +    +  +L   +            T     + + DG+ V   G+       +V 
Sbjct: 75  GAPAADVVPMQASLSAQSQADALQGEVEYRT---SQQPSIDGNTVDMDGERMRFADNTVR 131

Query: 131 I 131
            
Sbjct: 132 Y 132


>gi|188592123|ref|YP_001796721.1| flagellar hook-associated protein flgk [Cupriavidus taiwanensis
          LMG 19424]
 gi|170938497|emb|CAP63484.1| FlgK: Flagellar hook-associated protein 1 [Cupriavidus
          taiwanensis LMG 19424]
          Length = 639

 Score = 40.6 bits (93), Expect = 0.20,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 21/51 (41%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
           + F+IGL+     +  L+T   N +N+ T G+       +   G   +  
Sbjct: 1  MSLFSIGLSGLNTAQNALTTTGHNFANSATEGYSRQNTIVASAGGQYTSQG 51



 Score = 37.9 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 7/37 (18%), Positives = 11/37 (29%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N   E   M+   Q + +   +I          I
Sbjct: 599 SGVNMDEETVSMLRFQQLYQANARVIQTAGTLFDTII 635


>gi|228926779|ref|ZP_04089847.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
          pondicheriensis BGSC 4BA1]
 gi|228832892|gb|EEM78461.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
          pondicheriensis BGSC 4BA1]
          Length = 138

 Score = 40.6 bits (93), Expect = 0.20,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 29/72 (40%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
             L  + +TV+ N++N +T G++   V F+E +           + + S  +       
Sbjct: 15 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNEM 74

Query: 72 SFISTGTELDFA 83
             +  T+  +A
Sbjct: 75 HLPTVNTKNKYA 86


>gi|115523523|ref|YP_780434.1| flagellar hook-associated protein [Rhodopseudomonas palustris
          BisA53]
 gi|115517470|gb|ABJ05454.1| flagellar hook-associated protein FlgK [Rhodopseudomonas
          palustris BisA53]
          Length = 629

 Score = 40.6 bits (93), Expect = 0.20,   Method: Composition-based stats.
 Identities = 9/31 (29%), Positives = 19/31 (61%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGF 34
          + +I +A   A +  +S V+ N++N +T G+
Sbjct: 6  ALSIAMAGLRANQASMSLVSSNVANAETPGY 36



 Score = 37.9 bits (86), Expect = 1.3,   Method: Composition-based stats.
 Identities = 5/39 (12%), Positives = 14/39 (35%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            S  N   EM  ++ L   +++   ++          ++
Sbjct: 589 QSGVNMDEEMAHLLALQNAYSANARVMSTVNDMYKTLMQ 627


>gi|323967014|gb|EGB62440.1| flagellar basal-body rod protein FlgB [Escherichia coli M863]
 gi|323976554|gb|EGB71642.1| flagellar basal-body rod protein FlgB [Escherichia coli TW10509]
 gi|327253472|gb|EGE65110.1| flagellar basal-body rod protein FlgB [Escherichia coli STEC_7v]
          Length = 138

 Score = 40.6 bits (93), Expect = 0.20,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 23/62 (37%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   +A N++N DT G++   + F+  +  +      + S VA          
Sbjct: 15 ALNLRAQRQEVLAANIANADTPGYQARDIDFASELKKVMQRGRDETSMVALTMTSTQHIP 74

Query: 71 GS 72
            
Sbjct: 75 AQ 76


>gi|261344145|ref|ZP_05971789.1| flagellar basal-body rod protein FlgB [Providencia rustigianii
          DSM 4541]
 gi|282567738|gb|EFB73273.1| flagellar basal-body rod protein FlgB [Providencia rustigianii
          DSM 4541]
          Length = 137

 Score = 40.6 bits (93), Expect = 0.20,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 25/65 (38%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A    E R + +A N++N DT G++   + F+  +    +    K   ++          
Sbjct: 15 ALSIREARQTVLASNIANADTPGYQARDIDFNRQLQQAMDKGVVKGKGISLAVTAKGHIE 74

Query: 71 GSFIS 75
          G  + 
Sbjct: 75 GHDMQ 79


>gi|77918799|ref|YP_356614.1| flagellar basal-body rod protein FlgB [Pelobacter carbinolicus
          DSM 2380]
 gi|77544882|gb|ABA88444.1| flagellar basal-body rod protein FlgB [Pelobacter carbinolicus
          DSM 2380]
          Length = 141

 Score = 40.6 bits (93), Expect = 0.20,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 21/52 (40%)

Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLS 67
          +Q+   +A N++N+ T G+  +++ F E +     +        +       
Sbjct: 22 QQKQELIASNIANSQTPGYIPVQLSFEEDLARALQNNQSAPGQPSDQPHPRH 73


>gi|1857439|gb|AAC45657.1| FlgB [Proteus mirabilis]
          Length = 139

 Score = 40.6 bits (93), Expect = 0.20,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 20/66 (30%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     +R   +A N++N DT GF+   + F+  +     +       +           
Sbjct: 15 ALSLRNKRQEILAANIANADTPGFQARDIDFAAELKKTMENGRTGSHGLQLTMTSERHIP 74

Query: 71 GSFIST 76
                
Sbjct: 75 IKPGYR 80


>gi|56964037|ref|YP_175768.1| flagellar basal body rod protein FlgB [Bacillus clausii KSM-K16]
 gi|56910280|dbj|BAD64807.1| flagellar basal-body rod protein FlgB [Bacillus clausii KSM-K16]
          Length = 131

 Score = 40.6 bits (93), Expect = 0.20,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 18/43 (41%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
                 +   ++ N++N DT  F+   V F +V+ A+     
Sbjct: 13 GIRYSSTKQKAISTNLANVDTPNFKEKTVSFDQVLQAVGEKTG 55


>gi|78485815|ref|YP_391740.1| flagellar basal-body rod protein FlgB [Thiomicrospira crunogena
          XCL-2]
 gi|78364101|gb|ABB42066.1| Flagellar basal-body rod protein FlgB [Thiomicrospira crunogena
          XCL-2]
          Length = 133

 Score = 40.6 bits (93), Expect = 0.21,   Method: Composition-based stats.
 Identities = 19/95 (20%), Positives = 38/95 (40%), Gaps = 7/95 (7%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M++ F I   A    ++R S +A+N++N DT  F+   V + + + A + D+ +      
Sbjct: 1  MESVFGIHEHALAVRKERQSILANNIANADTPNFKARDVDWRKEMQAAEEDLSKGHYKPD 60

Query: 61 SGKEYLSKEVGSFISTG-------TELDFALEGDA 88
                    G   ++             AL+G+ 
Sbjct: 61 LKMTNSRHIEGFAEASTEDYLKYRMPTQPALDGNT 95


>gi|315296704|gb|EFU55999.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 16-3]
          Length = 138

 Score = 40.6 bits (93), Expect = 0.21,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 22/62 (35%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   +A N++N DT G++   + F+  +  +        S VA          
Sbjct: 15 ALNLRAQRQEVLAANIANADTPGYQARDIDFASELKKVMQRGRDATSVVALTMTSTQHIP 74

Query: 71 GS 72
            
Sbjct: 75 AQ 76


>gi|237731013|ref|ZP_04561494.1| flagellar hook-associated protein FlgK [Citrobacter sp. 30_2]
 gi|226906552|gb|EEH92470.1| flagellar hook-associated protein FlgK [Citrobacter sp. 30_2]
          Length = 552

 Score = 40.6 bits (93), Expect = 0.21,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLSAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|157146220|ref|YP_001453539.1| flagellar hook-associated protein FlgK [Citrobacter koseri ATCC
          BAA-895]
 gi|157083425|gb|ABV13103.1| hypothetical protein CKO_01977 [Citrobacter koseri ATCC BAA-895]
          Length = 544

 Score = 40.6 bits (93), Expect = 0.21,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLSAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|255026116|ref|ZP_05298102.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
          FSL J2-003]
          Length = 198

 Score = 40.6 bits (93), Expect = 0.21,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 18/42 (42%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46
          FN  L+   A +        N+SN +T G+    V  + V G
Sbjct: 6  FNTSLSGMSAAQIANMVAQQNISNMNTPGYIRQAVDQTAVYG 47


>gi|206970568|ref|ZP_03231520.1| flagellar basal-body rod protein FlgB [Bacillus cereus AH1134]
 gi|218232483|ref|YP_002366428.1| flagellar basal body rod protein FlgB [Bacillus cereus B4264]
 gi|229069295|ref|ZP_04202585.1| Flagellar basal-body rod protein [Bacillus cereus F65185]
 gi|229078925|ref|ZP_04211477.1| Flagellar basal-body rod protein [Bacillus cereus Rock4-2]
 gi|206734204|gb|EDZ51374.1| flagellar basal-body rod protein FlgB [Bacillus cereus AH1134]
 gi|218160440|gb|ACK60432.1| flagellar basal-body rod protein FlgB [Bacillus cereus B4264]
 gi|228704339|gb|EEL56773.1| Flagellar basal-body rod protein [Bacillus cereus Rock4-2]
 gi|228713782|gb|EEL65667.1| Flagellar basal-body rod protein [Bacillus cereus F65185]
          Length = 135

 Score = 40.6 bits (93), Expect = 0.21,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 29/72 (40%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
             L  + +TV+ N++N +T G++   V F+E +           + + S  +       
Sbjct: 12 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNEM 71

Query: 72 SFISTGTELDFA 83
             +  T+  +A
Sbjct: 72 HLPTVNTKNTYA 83


>gi|30019788|ref|NP_831419.1| flagellar basal body rod protein FlgB [Bacillus cereus ATCC
          14579]
 gi|49480943|ref|YP_035863.1| flagellar basal body rod protein FlgB [Bacillus thuringiensis
          serovar konkukian str. 97-27]
 gi|52143715|ref|YP_083114.1| flagellar basal body rod protein FlgB [Bacillus cereus E33L]
 gi|196033492|ref|ZP_03100904.1| flagellar basal-body rod protein FlgB [Bacillus cereus W]
 gi|296502343|ref|YP_003664043.1| flagellar basal body rod protein FlgB [Bacillus thuringiensis
          BMB171]
 gi|29895333|gb|AAP08620.1| Flagellar basal-body rod protein flgB [Bacillus cereus ATCC
          14579]
 gi|49332499|gb|AAT63145.1| flagellar basal-body rod protein [Bacillus thuringiensis serovar
          konkukian str. 97-27]
 gi|51977184|gb|AAU18734.1| flagellar basal-body rod protein [Bacillus cereus E33L]
 gi|195993926|gb|EDX57882.1| flagellar basal-body rod protein FlgB [Bacillus cereus W]
 gi|296323395|gb|ADH06323.1| flagellar basal body rod protein FlgB [Bacillus thuringiensis
          BMB171]
          Length = 135

 Score = 40.6 bits (93), Expect = 0.21,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 29/72 (40%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
             L  + +TV+ N++N +T G++   V F+E +           + + S  +       
Sbjct: 12 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNEM 71

Query: 72 SFISTGTELDFA 83
             +  T+  +A
Sbjct: 72 HLPTVNTKNTYA 83


>gi|238028852|ref|YP_002913083.1| flagellar basal body rod protein FlgB [Burkholderia glumae BGR1]
 gi|237878046|gb|ACR30379.1| Flagellar basal-body rod protein FlgB [Burkholderia glumae BGR1]
          Length = 167

 Score = 40.6 bits (93), Expect = 0.21,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 18/38 (47%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI 48
          A      R   ++ N++N DT G++   V F+  +G  
Sbjct: 20 ALDVRAYRQELISSNIANADTPGYQARDVDFASALGRS 57


>gi|167464316|ref|ZP_02329405.1| flagellar hook-associated protein FlgK [Paenibacillus larvae subsp.
           larvae BRL-230010]
          Length = 519

 Score = 40.6 bits (93), Expect = 0.21,   Method: Composition-based stats.
 Identities = 14/124 (11%), Positives = 37/124 (29%), Gaps = 6/124 (4%)

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
              ++   +   ++  + +       G               S+    G   +E +    
Sbjct: 399 DEKLISGNNTLAKLMAQLKDTKFTFSGAGRGITNSTINDFYGSLVGQLGVQSKEATRQYE 458

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           N     ++  +  T   G +E        EM +M+     FN+    +   ++ + + I 
Sbjct: 459 NEGKLVVQADTRRTSVSGVVEL------EEMMEMVKYNHSFNAAARFMTTYDEILNKLIN 512

Query: 240 NIAS 243
              +
Sbjct: 513 GTGT 516



 Score = 38.3 bits (87), Expect = 0.98,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 25/79 (31%), Gaps = 3/79 (3%)

Query: 1  MQTSFN---IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS 57
          M++SF        + LA +  L+ +  N+SN    G+   +V  +  +      I     
Sbjct: 1  MRSSFFGFETAKRSMLASQNVLNIIGHNISNQHIPGYSRQRVNLNASMPIEYPGIGHTTI 60

Query: 58 FVASGKEYLSKEVGSFIST 76
              G       +      
Sbjct: 61 PGQMGTGVDMHSITRIRDR 79


>gi|326939357|gb|AEA15253.1| flagellar basal body rod protein FlgB [Bacillus thuringiensis
          serovar chinensis CT-43]
          Length = 135

 Score = 40.2 bits (92), Expect = 0.22,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 29/72 (40%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
             L  + +TV+ N++N +T G++   V F+E +           + + S  +       
Sbjct: 12 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNEM 71

Query: 72 SFISTGTELDFA 83
             +  T+  +A
Sbjct: 72 HLPTVNTKNTYA 83


>gi|299066533|emb|CBJ37723.1| putative Flagellar basal-body rod protein FlgC [Ralstonia
           solanacearum CMR15]
          Length = 157

 Score = 40.2 bits (92), Expect = 0.22,   Method: Composition-based stats.
 Identities = 8/69 (11%), Positives = 21/69 (30%), Gaps = 6/69 (8%)

Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229
                       P  P  +  G    +G       ++  EM  ++   + + +    ++ 
Sbjct: 89  EPTGAQPRMVYEPGHPFANDKGFVAYQG------VDTATEMVTLMSALRAYEANVVAMNT 142

Query: 230 NEKSMLEAI 238
                L+A+
Sbjct: 143 ARTLSLKAL 151



 Score = 39.1 bits (89), Expect = 0.55,   Method: Composition-based stats.
 Identities = 9/34 (26%), Positives = 15/34 (44%), Gaps = 2/34 (5%)

Query: 1  MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTV 32
          M    +F I  A       R+   + N++N +TV
Sbjct: 1  MDYARAFAISAAGMAVERTRVDVASLNLANANTV 34


>gi|116694225|ref|YP_728436.1| flagellar hook-associated protein FlgK [Ralstonia eutropha H16]
 gi|113528724|emb|CAJ95071.1| flagellar hook-associated protein 1 [Ralstonia eutropha H16]
          Length = 639

 Score = 40.2 bits (92), Expect = 0.22,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 21/51 (41%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
           + F+IGL+     +  L+T   N +N+ T G+       +   G   +  
Sbjct: 1  MSLFSIGLSGLNTAQNALTTTGHNFANSATEGYSRQNTIVASAGGQYTSQG 51



 Score = 37.9 bits (86), Expect = 1.2,   Method: Composition-based stats.
 Identities = 7/37 (18%), Positives = 11/37 (29%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N   E   M+   Q + +   +I          I
Sbjct: 599 SGVNMDEETVSMLRFQQLYQANARVIQTAGTLFDTII 635


>gi|78776566|ref|YP_392881.1| flagellar basal body rod protein FlgB [Sulfurimonas denitrificans
           DSM 1251]
 gi|78497106|gb|ABB43646.1| Flagellar basal-body rod protein FlgB [Sulfurimonas denitrificans
           DSM 1251]
          Length = 143

 Score = 40.2 bits (92), Expect = 0.22,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 27/93 (29%)

Query: 8   GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLS 67
              A      R   ++ N++N DT  +R   V+F + +   K  I        S  +  S
Sbjct: 12  AAKALDYRAIRQDMISSNIANADTPFYRPRDVRFEDTLAEQKAKILNLSIPKLSLAQTDS 71

Query: 68  KEVGSFISTGTELDFALEGDAWFALESPRGIIL 100
             +                D   A      + L
Sbjct: 72  AHIPLKDEPDNSKAKTFFRDGHMARNDGNSVDL 104


>gi|119775453|ref|YP_928193.1| flagellar basal body rod protein FlgB [Shewanella amazonensis
          SB2B]
 gi|119767953|gb|ABM00524.1| flagellar basal-body rod protein FlgB [Shewanella amazonensis
          SB2B]
          Length = 132

 Score = 40.2 bits (92), Expect = 0.22,   Method: Composition-based stats.
 Identities = 9/57 (15%), Positives = 23/57 (40%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFI 74
          R   ++ N++N DT  ++   V F++ + A ++          S   +  + +    
Sbjct: 22 RAEVLSSNIANADTPHYKARDVNFADALQAARSQQRGMQMAQTSEGHFDLQALSRQH 78


>gi|315452788|ref|YP_004073058.1| putative flagellar basal-body rod protein [Helicobacter felis
          ATCC 49179]
 gi|315131840|emb|CBY82468.1| putative flagellar basal-body rod protein [Helicobacter felis
          ATCC 49179]
          Length = 140

 Score = 40.2 bits (92), Expect = 0.22,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 19/45 (42%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK 55
          A      R   +A N++N DT  +R   + F  ++   K ++   
Sbjct: 13 AMDYRALRQDLIASNIANVDTPFYRPKDLDFETMLAHKKAEVFDH 57


>gi|281178182|dbj|BAI54512.1| flagellar basal-body rod protein FlgB [Escherichia coli SE15]
          Length = 138

 Score = 40.2 bits (92), Expect = 0.22,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 22/62 (35%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   +A N++N DT G++   + F+  +  +        S VA          
Sbjct: 15 ALNLRAQRQEVLAANIANADTPGYQARDIDFASELKKVMQRGRDATSVVALTMTSTQHIP 74

Query: 71 GS 72
            
Sbjct: 75 AQ 76


>gi|253773903|ref|YP_003036734.1| flagellar basal body rod protein FlgB [Escherichia coli
          'BL21-Gold(DE3)pLysS AG']
 gi|254161179|ref|YP_003044287.1| flagellar basal body rod protein FlgB [Escherichia coli B str.
          REL606]
 gi|297516832|ref|ZP_06935218.1| flagellar basal body rod protein FlgB [Escherichia coli OP50]
 gi|242376877|emb|CAQ31594.1| flagellar basal-body rod protein FlgB, subunit of Flagellar Motor
          Complex and Flagellum [Escherichia coli BL21(DE3)]
 gi|253324947|gb|ACT29549.1| flagellar basal-body rod protein FlgB [Escherichia coli
          'BL21-Gold(DE3)pLysS AG']
 gi|253973080|gb|ACT38751.1| flagellar basal-body rod protein B [Escherichia coli B str.
          REL606]
 gi|253977294|gb|ACT42964.1| flagellar basal-body rod protein B [Escherichia coli BL21(DE3)]
          Length = 138

 Score = 40.2 bits (92), Expect = 0.22,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 22/62 (35%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   +A N++N DT G++   + F+  +  +        S VA          
Sbjct: 15 ALNLRAQRQEVLAANIANADTPGYQARDIDFASELKKVIQRGRDATSVVALTMTSTQHIP 74

Query: 71 GS 72
            
Sbjct: 75 AQ 76


>gi|254470270|ref|ZP_05083674.1| flagellar basal-body rod protein FlgB [Pseudovibrio sp. JE062]
 gi|211960581|gb|EEA95777.1| flagellar basal-body rod protein FlgB [Pseudovibrio sp. JE062]
          Length = 127

 Score = 40.2 bits (92), Expect = 0.22,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 3/57 (5%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIK---VKFSEVVGAIKNDIDQKISFVASGKEY 65
              +QR   +A+N++N DT G+R+     + FS++V A +     +    ++G   
Sbjct: 9  MQWHQQRQGVLAENVANADTPGYRSKDLKELSFSDMVDAEQGTGALRPVVTSAGHIT 65


>gi|196039148|ref|ZP_03106455.1| flagellar basal-body rod protein FlgB [Bacillus cereus
          NVH0597-99]
 gi|196030293|gb|EDX68893.1| flagellar basal-body rod protein FlgB [Bacillus cereus
          NVH0597-99]
          Length = 135

 Score = 40.2 bits (92), Expect = 0.22,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 20/34 (58%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV 45
             L  + +TV+ N++N +T G++   V F+E +
Sbjct: 12 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQM 45


>gi|333004892|gb|EGK24412.1| flagellar hook-associated protein 1 domain protein [Shigella
          flexneri VA-6]
          Length = 274

 Score = 40.2 bits (92), Expect = 0.22,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|228914322|ref|ZP_04077937.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
          pulsiensis BGSC 4CC1]
 gi|228845316|gb|EEM90352.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
          pulsiensis BGSC 4CC1]
          Length = 138

 Score = 40.2 bits (92), Expect = 0.22,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 29/72 (40%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
             L  + +TV+ N++N +T G++   V F+E +           + + S  +       
Sbjct: 15 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNEM 74

Query: 72 SFISTGTELDFA 83
             +  T+  +A
Sbjct: 75 HLPTVNTKNTYA 86


>gi|187478182|ref|YP_786206.1| flagellar basal body rod protein FlgB [Bordetella avium 197N]
 gi|115422768|emb|CAJ49296.1| flagellar basal-body rod protein [Bordetella avium 197N]
          Length = 135

 Score = 40.2 bits (92), Expect = 0.22,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 22/69 (31%)

Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76
          QR   ++ N++N DT  ++     F   +    +   Q                 +  S 
Sbjct: 21 QRQEVLSSNIANADTPNYKARDFDFKTAMQNALDGRMQLPDTQLHLTSARHIPAKAVSSG 80

Query: 77 GTELDFALE 85
            EL + L 
Sbjct: 81 PAELQYRLP 89


>gi|260437430|ref|ZP_05791246.1| flagellar hook-associated protein FlgK [Butyrivibrio crossotus
          DSM 2876]
 gi|292810062|gb|EFF69267.1| flagellar hook-associated protein FlgK [Butyrivibrio crossotus
          DSM 2876]
          Length = 543

 Score = 40.2 bits (92), Expect = 0.22,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 25/81 (30%), Gaps = 4/81 (4%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV----VGAIKNDIDQKISFV 59
             IG +   A    ++T A N+SN +T G+              V      +    + +
Sbjct: 7  GLTIGSSGLFASNAAINTTAHNISNINTKGYTKQVSNQQAAESIRVYQSYGTVGTGTAVI 66

Query: 60 ASGKEYLSKEVGSFISTGTEL 80
          +  +   S     +    T  
Sbjct: 67 SIDQLRSSYYDTKYRHANTNC 87


>gi|268589985|ref|ZP_06124206.1| flagellar basal-body rod protein FlgB [Providencia rettgeri DSM
          1131]
 gi|291314704|gb|EFE55157.1| flagellar basal-body rod protein FlgB [Providencia rettgeri DSM
          1131]
          Length = 137

 Score = 40.2 bits (92), Expect = 0.22,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 22/62 (35%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A    E R + +A N++N DT G++   + F+  +    +        V           
Sbjct: 15 ALSIREARQTVLASNIANADTPGYQARDIDFNRQLQQAMDKGVVGGKGVTLAVTSKGHIE 74

Query: 71 GS 72
          G 
Sbjct: 75 GR 76


>gi|148380623|ref|YP_001255164.1| flagellar basal-body rod protein FlgB [Clostridium botulinum A
          str. ATCC 3502]
 gi|153932093|ref|YP_001384909.1| flagellar basal body rod protein FlgB [Clostridium botulinum A
          str. ATCC 19397]
 gi|153937135|ref|YP_001388378.1| flagellar basal body rod protein FlgB [Clostridium botulinum A
          str. Hall]
 gi|153941113|ref|YP_001391965.1| flagellar basal body rod protein FlgB [Clostridium botulinum F
          str. Langeland]
 gi|168183266|ref|ZP_02617930.1| flagellar basal-body rod protein FlgB [Clostridium botulinum Bf]
 gi|170757776|ref|YP_001782282.1| flagellar basal body rod protein FlgB [Clostridium botulinum B1
          str. Okra]
 gi|226950078|ref|YP_002805169.1| flagellar basal-body rod protein FlgB [Clostridium botulinum A2
          str. Kyoto]
 gi|237796105|ref|YP_002863657.1| flagellar basal-body rod protein FlgB [Clostridium botulinum Ba4
          str. 657]
 gi|148290107|emb|CAL84226.1| flagellar basal-body rod protein [Clostridium botulinum A str.
          ATCC 3502]
 gi|152928137|gb|ABS33637.1| flagellar basal-body rod protein FlgB [Clostridium botulinum A
          str. ATCC 19397]
 gi|152933049|gb|ABS38548.1| flagellar basal-body rod protein FlgB [Clostridium botulinum A
          str. Hall]
 gi|152937009|gb|ABS42507.1| flagellar basal-body rod protein FlgB [Clostridium botulinum F
          str. Langeland]
 gi|169122988|gb|ACA46824.1| flagellar basal-body rod protein FlgB [Clostridium botulinum B1
          str. Okra]
 gi|182673652|gb|EDT85613.1| flagellar basal-body rod protein FlgB [Clostridium botulinum Bf]
 gi|226842504|gb|ACO85170.1| flagellar basal-body rod protein FlgB [Clostridium botulinum A2
          str. Kyoto]
 gi|229262300|gb|ACQ53333.1| flagellar basal-body rod protein FlgB [Clostridium botulinum Ba4
          str. 657]
 gi|295319982|gb|ADG00360.1| flagellar basal-body rod protein FlgB [Clostridium botulinum F
          str. 230613]
          Length = 133

 Score = 40.2 bits (92), Expect = 0.22,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 27/58 (46%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSK 68
          +  A   R   +++N++N +T  ++   V F E +    N+I+ K++      + +  
Sbjct: 19 SMNASSYRGKVISNNIANYNTPDYKRHYVTFEETLKDNLNNINMKVTAEKHMNDGVEF 76


>gi|261253608|ref|ZP_05946181.1| flagellar hook-associated protein FlgK [Vibrio orientalis CIP
          102891]
 gi|260936999|gb|EEX92988.1| flagellar hook-associated protein FlgK [Vibrio orientalis CIP
          102891]
          Length = 624

 Score = 40.2 bits (92), Expect = 0.22,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE-VVGAIKNDIDQKISFVASGK 63
           N+G  + L  +++L+T   N+SN +T G+    V     +      +       V   +
Sbjct: 6  LNLGAQSVLTAQRQLNTTGHNISNVNTEGYSRQSVIQGTNMPRQYGGETYGMGVHVDKVR 65

Query: 64 EYLSKEVGSFISTGTELDF 82
              +   + ++  T    
Sbjct: 66 RSWDQFAVNELNVSTTSHA 84



 Score = 35.2 bits (79), Expect = 8.4,   Method: Composition-based stats.
 Identities = 4/35 (11%), Positives = 12/35 (34%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            N   E   M+   Q + + + ++     +    +
Sbjct: 587 VNLDEEAANMMKFQQAYMASSRIMQAANDTFNTIL 621


>gi|16129036|ref|NP_415591.1| flagellar component of cell-proximal portion of basal-body rod
          [Escherichia coli str. K-12 substr. MG1655]
 gi|24112484|ref|NP_706994.1| flagellar basal body rod protein FlgB [Shigella flexneri 2a str.
          301]
 gi|26247213|ref|NP_753253.1| flagellar basal body rod protein FlgB [Escherichia coli CFT073]
 gi|30062611|ref|NP_836782.1| flagellar basal body rod protein FlgB [Shigella flexneri 2a str.
          2457T]
 gi|74311635|ref|YP_310054.1| flagellar basal body rod protein FlgB [Shigella sonnei Ss046]
 gi|89107919|ref|AP_001699.1| flagellar component of cell-proximal portion of basal-body rod
          [Escherichia coli str. K-12 substr. W3110]
 gi|110641249|ref|YP_668979.1| flagellar basal body rod protein FlgB [Escherichia coli 536]
 gi|110805091|ref|YP_688611.1| flagellar basal body rod protein FlgB [Shigella flexneri 5 str.
          8401]
 gi|157157889|ref|YP_001462307.1| flagellar basal body rod protein FlgB [Escherichia coli E24377A]
 gi|157160600|ref|YP_001457918.1| flagellar basal body rod protein FlgB [Escherichia coli HS]
 gi|170020531|ref|YP_001725485.1| flagellar basal body rod protein FlgB [Escherichia coli ATCC
          8739]
 gi|170080724|ref|YP_001730044.1| flagellar component of cell-proximal portion of basal-body rod
          [Escherichia coli str. K-12 substr. DH10B]
 gi|170683265|ref|YP_001744107.1| flagellar basal body rod protein FlgB [Escherichia coli SMS-3-5]
 gi|187732438|ref|YP_001880755.1| flagellar basal body rod protein FlgB [Shigella boydii CDC
          3083-94]
 gi|191168464|ref|ZP_03030252.1| flagellar basal-body rod protein FlgB [Escherichia coli B7A]
 gi|191172447|ref|ZP_03033988.1| flagellar basal-body rod protein FlgB [Escherichia coli F11]
 gi|193064567|ref|ZP_03045647.1| flagellar basal-body rod protein FlgB [Escherichia coli E22]
 gi|193069459|ref|ZP_03050413.1| flagellar basal-body rod protein FlgB [Escherichia coli E110019]
 gi|194428410|ref|ZP_03060950.1| flagellar basal-body rod protein FlgB [Escherichia coli B171]
 gi|194438104|ref|ZP_03070197.1| flagellar basal-body rod protein FlgB [Escherichia coli 101-1]
 gi|209918327|ref|YP_002292411.1| flagellar basal body rod protein FlgB [Escherichia coli SE11]
 gi|218553652|ref|YP_002386565.1| flagellar basal body rod protein FlgB [Escherichia coli IAI1]
 gi|218694607|ref|YP_002402274.1| flagellar basal body rod protein FlgB [Escherichia coli 55989]
 gi|218700424|ref|YP_002408053.1| flagellar basal body rod protein FlgB [Escherichia coli IAI39]
 gi|218704481|ref|YP_002412000.1| flagellar basal body rod protein FlgB [Escherichia coli UMN026]
 gi|227886569|ref|ZP_04004374.1| flagellar component of cell-proximal portion of basal-body rod
          [Escherichia coli 83972]
 gi|238900327|ref|YP_002926123.1| flagellar component of cell-proximal portion of basal-body rod
          [Escherichia coli BW2952]
 gi|256018670|ref|ZP_05432535.1| flagellar basal body rod protein FlgB [Shigella sp. D9]
 gi|256023229|ref|ZP_05437094.1| flagellar basal body rod protein FlgB [Escherichia sp. 4_1_40B]
 gi|260843313|ref|YP_003221091.1| flagellar component FlgB of cell-proximal portion of basal-body
          rod [Escherichia coli O103:H2 str. 12009]
 gi|260854556|ref|YP_003228447.1| flagellar component FlgB of cell-proximal portion of basal-body
          rod [Escherichia coli O26:H11 str. 11368]
 gi|260867436|ref|YP_003233838.1| flagellar component FlgB of cell-proximal portion of basal-body
          rod [Escherichia coli O111:H- str. 11128]
 gi|293404357|ref|ZP_06648351.1| flgB [Escherichia coli FVEC1412]
 gi|293409439|ref|ZP_06653015.1| flagellar basal-body rod protein FlgB [Escherichia coli B354]
 gi|293414368|ref|ZP_06657017.1| flagellar basal-body rod protein FlgB [Escherichia coli B185]
 gi|293433363|ref|ZP_06661791.1| flagellar basal-body rod protein FlgB [Escherichia coli B088]
 gi|298380137|ref|ZP_06989742.1| flagellar basal-body rod protein FlgB [Escherichia coli FVEC1302]
 gi|300816775|ref|ZP_07096995.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 107-1]
 gi|300821146|ref|ZP_07101295.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 119-7]
 gi|300899592|ref|ZP_07117831.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 198-1]
 gi|300902464|ref|ZP_07120446.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 84-1]
 gi|300918675|ref|ZP_07135256.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 115-1]
 gi|300922599|ref|ZP_07138699.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 182-1]
 gi|300928375|ref|ZP_07143909.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 187-1]
 gi|300950168|ref|ZP_07164113.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 116-1]
 gi|300954387|ref|ZP_07166841.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 175-1]
 gi|300974377|ref|ZP_07172589.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 45-1]
 gi|300982624|ref|ZP_07176208.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 200-1]
 gi|301023260|ref|ZP_07187057.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 69-1]
 gi|301029712|ref|ZP_07192766.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 196-1]
 gi|301051143|ref|ZP_07197973.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 185-1]
 gi|301304988|ref|ZP_07211090.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 124-1]
 gi|301328557|ref|ZP_07221618.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 78-1]
 gi|301644985|ref|ZP_07244951.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 146-1]
 gi|306814078|ref|ZP_07448251.1| flagellar basal body rod protein FlgB [Escherichia coli NC101]
 gi|307137708|ref|ZP_07497064.1| flagellar basal body rod protein FlgB [Escherichia coli H736]
 gi|307310149|ref|ZP_07589799.1| flagellar basal-body rod protein FlgB [Escherichia coli W]
 gi|309798067|ref|ZP_07692442.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 145-7]
 gi|312971210|ref|ZP_07785388.1| flagellar basal-body rod protein FlgB [Escherichia coli 1827-70]
 gi|331641617|ref|ZP_08342752.1| flagellar basal-body rod protein FlgB [Escherichia coli H736]
 gi|331652126|ref|ZP_08353145.1| flagellar basal-body rod protein FlgB [Escherichia coli M718]
 gi|331662479|ref|ZP_08363402.1| flagellar basal-body rod protein FlgB [Escherichia coli TA143]
 gi|331667473|ref|ZP_08368337.1| flagellar basal-body rod protein FlgB [Escherichia coli TA271]
 gi|331672593|ref|ZP_08373382.1| flagellar basal-body rod protein FlgB [Escherichia coli TA280]
 gi|331676864|ref|ZP_08377560.1| flagellar basal-body rod protein FlgB [Escherichia coli H591]
 gi|331682575|ref|ZP_08383194.1| flagellar basal-body rod protein FlgB [Escherichia coli H299]
 gi|332279739|ref|ZP_08392152.1| flagellar component of cell-proximal portion of basal-body rod
          [Shigella sp. D9]
 gi|78100008|sp|P0ABX0|FLGB_ECOL6 RecName: Full=Flagellar basal-body rod protein flgB; AltName:
          Full=Putative proximal rod protein
 gi|78100009|sp|P0ABW9|FLGB_ECOLI RecName: Full=Flagellar basal-body rod protein flgB; AltName:
          Full=Putative proximal rod protein
 gi|78100010|sp|P0ABX1|FLGB_SHIFL RecName: Full=Flagellar basal-body rod protein flgB; AltName:
          Full=Putative proximal rod protein
 gi|26107614|gb|AAN79813.1|AE016759_87 Flagellar basal-body rod protein flgB [Escherichia coli CFT073]
 gi|1787313|gb|AAC74157.1| flagellar component of cell-proximal portion of basal-body rod
          [Escherichia coli str. K-12 substr. MG1655]
 gi|4062650|dbj|BAA35881.1| flagellar component of cell-proximal portion of basal-body rod
          [Escherichia coli str. K12 substr. W3110]
 gi|24051370|gb|AAN42701.1| flagellar basal-body rod protein FlgB (proximal rod protein)
          [Shigella flexneri 2a str. 301]
 gi|30040857|gb|AAP16588.1| flagellar basal-body rod protein FlgB (proximal rod protein)
          [Shigella flexneri 2a str. 2457T]
 gi|73855112|gb|AAZ87819.1| flagellar protein for cell-proximal portion of basal-body rod
          [Shigella sonnei Ss046]
 gi|110342841|gb|ABG69078.1| flagellar basal-body rod protein FlgB [Escherichia coli 536]
 gi|110614639|gb|ABF03306.1| Flagellar basal body protein [Shigella flexneri 5 str. 8401]
 gi|157066280|gb|ABV05535.1| flagellar basal-body rod protein FlgB [Escherichia coli HS]
 gi|157079919|gb|ABV19627.1| flagellar basal-body rod protein FlgB [Escherichia coli E24377A]
 gi|169755459|gb|ACA78158.1| flagellar basal-body rod protein FlgB [Escherichia coli ATCC
          8739]
 gi|169888559|gb|ACB02266.1| flagellar component of cell-proximal portion of basal-body rod
          [Escherichia coli str. K-12 substr. DH10B]
 gi|170520983|gb|ACB19161.1| flagellar basal-body rod protein FlgB [Escherichia coli SMS-3-5]
 gi|187429430|gb|ACD08704.1| flagellar basal-body rod protein FlgB [Shigella boydii CDC
          3083-94]
 gi|190901483|gb|EDV61244.1| flagellar basal-body rod protein FlgB [Escherichia coli B7A]
 gi|190907331|gb|EDV66929.1| flagellar basal-body rod protein FlgB [Escherichia coli F11]
 gi|192927819|gb|EDV82433.1| flagellar basal-body rod protein FlgB [Escherichia coli E22]
 gi|192957207|gb|EDV87656.1| flagellar basal-body rod protein FlgB [Escherichia coli E110019]
 gi|194413462|gb|EDX29744.1| flagellar basal-body rod protein FlgB [Escherichia coli B171]
 gi|194423040|gb|EDX39034.1| flagellar basal-body rod protein FlgB [Escherichia coli 101-1]
 gi|209911586|dbj|BAG76660.1| flagellar basal-body rod protein FlgB [Escherichia coli SE11]
 gi|218351339|emb|CAU97045.1| flagellar component of cell-proximal portion of basal-body rod
          [Escherichia coli 55989]
 gi|218360420|emb|CAQ97972.1| flagellar component of cell-proximal portion of basal-body rod
          [Escherichia coli IAI1]
 gi|218370410|emb|CAR18217.1| flagellar component of cell-proximal portion of basal-body rod
          [Escherichia coli IAI39]
 gi|218431578|emb|CAR12457.1| flagellar component of cell-proximal portion of basal-body rod
          [Escherichia coli UMN026]
 gi|227836773|gb|EEJ47239.1| flagellar component of cell-proximal portion of basal-body rod
          [Escherichia coli 83972]
 gi|238861101|gb|ACR63099.1| flagellar component of cell-proximal portion of basal-body rod
          [Escherichia coli BW2952]
 gi|257753205|dbj|BAI24707.1| flagellar component FlgB of cell-proximal portion of basal-body
          rod [Escherichia coli O26:H11 str. 11368]
 gi|257758460|dbj|BAI29957.1| flagellar component FlgB of cell-proximal portion of basal-body
          rod [Escherichia coli O103:H2 str. 12009]
 gi|257763792|dbj|BAI35287.1| flagellar component FlgB of cell-proximal portion of basal-body
          rod [Escherichia coli O111:H- str. 11128]
 gi|260449787|gb|ACX40209.1| flagellar basal-body rod protein FlgB [Escherichia coli DH1]
 gi|281600493|gb|ADA73477.1| Flagellar basal-body rod protein flgB [Shigella flexneri 2002017]
 gi|284920896|emb|CBG33959.1| flagellar basal-body rod protein FlgB [Escherichia coli 042]
 gi|291324182|gb|EFE63604.1| flagellar basal-body rod protein FlgB [Escherichia coli B088]
 gi|291428943|gb|EFF01968.1| flgB [Escherichia coli FVEC1412]
 gi|291434426|gb|EFF07399.1| flagellar basal-body rod protein FlgB [Escherichia coli B185]
 gi|291469907|gb|EFF12391.1| flagellar basal-body rod protein FlgB [Escherichia coli B354]
 gi|298279835|gb|EFI21343.1| flagellar basal-body rod protein FlgB [Escherichia coli FVEC1302]
 gi|299877400|gb|EFI85611.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 196-1]
 gi|300297164|gb|EFJ53549.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 185-1]
 gi|300307089|gb|EFJ61609.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 200-1]
 gi|300318623|gb|EFJ68407.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 175-1]
 gi|300356863|gb|EFJ72733.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 198-1]
 gi|300397105|gb|EFJ80643.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 69-1]
 gi|300405496|gb|EFJ89034.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 84-1]
 gi|300410620|gb|EFJ94158.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 45-1]
 gi|300414169|gb|EFJ97479.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 115-1]
 gi|300421076|gb|EFK04387.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 182-1]
 gi|300450515|gb|EFK14135.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 116-1]
 gi|300463633|gb|EFK27126.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 187-1]
 gi|300526445|gb|EFK47514.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 119-7]
 gi|300530549|gb|EFK51611.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 107-1]
 gi|300839706|gb|EFK67466.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 124-1]
 gi|300844949|gb|EFK72709.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 78-1]
 gi|301076714|gb|EFK91520.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 146-1]
 gi|305852715|gb|EFM53163.1| flagellar basal body rod protein FlgB [Escherichia coli NC101]
 gi|306909867|gb|EFN40361.1| flagellar basal-body rod protein FlgB [Escherichia coli W]
 gi|307553075|gb|ADN45850.1| flagellar basal-body rod protein FlgB [Escherichia coli ABU
          83972]
 gi|308118350|gb|EFO55612.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 145-7]
 gi|309701345|emb|CBJ00646.1| flagellar basal-body rod protein FlgB [Escherichia coli ETEC
          H10407]
 gi|310336412|gb|EFQ01598.1| flagellar basal-body rod protein FlgB [Escherichia coli 1827-70]
 gi|313650477|gb|EFS14884.1| flagellar basal-body rod protein FlgB [Shigella flexneri 2a str.
          2457T]
 gi|315060351|gb|ADT74678.1| flagellar component of cell-proximal portion of basal-body rod
          [Escherichia coli W]
 gi|315135705|dbj|BAJ42864.1| flgB [Escherichia coli DH1]
 gi|315253874|gb|EFU33842.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 85-1]
 gi|315291067|gb|EFU50430.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 153-1]
 gi|315618243|gb|EFU98833.1| flagellar basal-body rod protein FlgB [Escherichia coli 3431]
 gi|320173526|gb|EFW48722.1| Flagellar basal-body rod protein FlgB [Shigella dysenteriae CDC
          74-1112]
 gi|320200969|gb|EFW75553.1| Flagellar basal-body rod protein FlgB [Escherichia coli EC4100B]
 gi|323156880|gb|EFZ43014.1| flagellar basal-body rod protein FlgB [Escherichia coli EPECa14]
 gi|323163755|gb|EFZ49574.1| flagellar basal-body rod protein FlgB [Escherichia coli E128010]
 gi|323165581|gb|EFZ51368.1| flagellar basal-body rod protein FlgB [Shigella sonnei 53G]
 gi|323174798|gb|EFZ60413.1| flagellar basal-body rod protein FlgB [Escherichia coli LT-68]
 gi|323175696|gb|EFZ61290.1| flagellar basal-body rod protein FlgB [Escherichia coli 1180]
 gi|323185804|gb|EFZ71165.1| flagellar basal-body rod protein FlgB [Escherichia coli 1357]
 gi|323379088|gb|ADX51356.1| flagellar basal-body rod protein FlgB [Escherichia coli KO11]
 gi|323937813|gb|EGB34077.1| flagellar basal-body rod protein FlgB [Escherichia coli E1520]
 gi|323942542|gb|EGB38709.1| flagellar basal-body rod protein FlgB [Escherichia coli E482]
 gi|323962672|gb|EGB58250.1| flagellar basal-body rod protein FlgB [Escherichia coli H489]
 gi|323973338|gb|EGB68527.1| flagellar basal-body rod protein FlgB [Escherichia coli TA007]
 gi|324013347|gb|EGB82566.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 60-1]
 gi|324017423|gb|EGB86642.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 117-3]
 gi|324117356|gb|EGC11263.1| flagellar basal-body rod protein FlgB [Escherichia coli E1167]
 gi|331038415|gb|EGI10635.1| flagellar basal-body rod protein FlgB [Escherichia coli H736]
 gi|331050404|gb|EGI22462.1| flagellar basal-body rod protein FlgB [Escherichia coli M718]
 gi|331060901|gb|EGI32865.1| flagellar basal-body rod protein FlgB [Escherichia coli TA143]
 gi|331065058|gb|EGI36953.1| flagellar basal-body rod protein FlgB [Escherichia coli TA271]
 gi|331070236|gb|EGI41602.1| flagellar basal-body rod protein FlgB [Escherichia coli TA280]
 gi|331075553|gb|EGI46851.1| flagellar basal-body rod protein FlgB [Escherichia coli H591]
 gi|331080206|gb|EGI51385.1| flagellar basal-body rod protein FlgB [Escherichia coli H299]
 gi|332102091|gb|EGJ05437.1| flagellar component of cell-proximal portion of basal-body rod
          [Shigella sp. D9]
 gi|332342619|gb|AEE55953.1| flagellar basal-body rod protein FlgB [Escherichia coli UMNK88]
 gi|332758231|gb|EGJ88554.1| flagellar basal-body rod protein FlgB [Shigella flexneri 4343-70]
 gi|332759615|gb|EGJ89920.1| flagellar basal-body rod protein FlgB [Shigella flexneri 2747-71]
 gi|332761417|gb|EGJ91701.1| flagellar basal-body rod protein FlgB [Shigella flexneri K-671]
 gi|332767679|gb|EGJ97872.1| flagellar basal-body rod protein FlgB [Shigella flexneri 2930-71]
 gi|333005507|gb|EGK25025.1| flagellar basal-body rod protein FlgB [Shigella flexneri K-218]
 gi|333008274|gb|EGK27748.1| flagellar basal-body rod protein FlgB [Shigella flexneri K-272]
 gi|333019331|gb|EGK38614.1| flagellar basal-body rod protein FlgB [Shigella flexneri K-304]
 gi|333019764|gb|EGK39036.1| flagellar basal-body rod protein FlgB [Shigella flexneri K-227]
          Length = 138

 Score = 40.2 bits (92), Expect = 0.22,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 22/62 (35%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   +A N++N DT G++   + F+  +  +        S VA          
Sbjct: 15 ALNLRAQRQEVLAANIANADTPGYQARDIDFASELKKVMQRGRDATSVVALTMTSTQHIP 74

Query: 71 GS 72
            
Sbjct: 75 AQ 76


>gi|260774935|ref|ZP_05883836.1| flagellar basal-body rod protein FlgB [Vibrio coralliilyticus
          ATCC BAA-450]
 gi|260609190|gb|EEX35348.1| flagellar basal-body rod protein FlgB [Vibrio coralliilyticus
          ATCC BAA-450]
          Length = 132

 Score = 40.2 bits (92), Expect = 0.23,   Method: Composition-based stats.
 Identities = 6/38 (15%), Positives = 19/38 (50%)

Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
          E+    ++ N++  +T G+++  + F + + A  +   
Sbjct: 20 ERNAEVISTNIAQANTPGYKSKGMDFQKALQAATSGAS 57


>gi|160896082|ref|YP_001561664.1| flagellar basal-body rod protein FlgB [Delftia acidovorans SPH-1]
 gi|160361666|gb|ABX33279.1| flagellar basal-body rod protein FlgB [Delftia acidovorans SPH-1]
          Length = 160

 Score = 40.2 bits (92), Expect = 0.23,   Method: Composition-based stats.
 Identities = 12/66 (18%), Positives = 25/66 (37%)

Query: 11  AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
           A +   +R   +A N++N DT G+      F E + A+ +          S   ++    
Sbjct: 38  ALVLRAERQRAIASNIANADTPGYVARDFNFREALTAVTSGPSPMTLASVSQGGHIPLPA 97

Query: 71  GSFIST 76
            +   +
Sbjct: 98  AASGQS 103


>gi|313650466|gb|EFS14873.1| flagellar hook-associated 1 domain protein [Shigella flexneri 2a
          str. 2457T]
 gi|332758242|gb|EGJ88565.1| flagellar hook-associated protein 1 domain protein [Shigella
          flexneri 4343-70]
 gi|332759634|gb|EGJ89939.1| flagellar hook-associated protein 1 domain protein [Shigella
          flexneri 2747-71]
 gi|332761428|gb|EGJ91712.1| flagellar hook-associated protein 1 domain protein [Shigella
          flexneri K-671]
 gi|332767690|gb|EGJ97883.1| flagella basal body rod family protein [Shigella flexneri
          2930-71]
 gi|333005757|gb|EGK25275.1| flagellar hook-associated protein 1 domain protein [Shigella
          flexneri K-218]
 gi|333008286|gb|EGK27760.1| flagellar hook-associated protein 1 domain protein [Shigella
          flexneri K-272]
 gi|333019422|gb|EGK38705.1| flagellar hook-associated protein 1 domain protein [Shigella
          flexneri K-304]
 gi|333019776|gb|EGK39048.1| flagellar hook-associated protein 1 domain protein [Shigella
          flexneri K-227]
          Length = 274

 Score = 40.2 bits (92), Expect = 0.23,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|311105932|ref|YP_003978785.1| flagellar basal-body rod protein FlgB [Achromobacter xylosoxidans
          A8]
 gi|310760621|gb|ADP16070.1| flagellar basal-body rod protein FlgB [Achromobacter xylosoxidans
          A8]
          Length = 135

 Score = 40.2 bits (92), Expect = 0.23,   Method: Composition-based stats.
 Identities = 7/57 (12%), Positives = 16/57 (28%), Gaps = 2/57 (3%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLS 67
             A   R   ++ N++N DT  ++     F   +        +      +      
Sbjct: 17 GLRAQ--RQEVLSSNIANADTPNYKARDFDFKTAMANAMEGTKRLPDTSLTLTSARH 71


>gi|163738065|ref|ZP_02145481.1| flagellar basal-body rod protein; FlgB [Phaeobacter gallaeciensis
          BS107]
 gi|163742539|ref|ZP_02149925.1| flagellar basal-body rod protein; FlgB [Phaeobacter gallaeciensis
          2.10]
 gi|161384124|gb|EDQ08507.1| flagellar basal-body rod protein; FlgB [Phaeobacter gallaeciensis
          2.10]
 gi|161388681|gb|EDQ13034.1| flagellar basal-body rod protein; FlgB [Phaeobacter gallaeciensis
          BS107]
          Length = 138

 Score = 40.2 bits (92), Expect = 0.23,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 22/53 (41%), Gaps = 1/53 (1%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIKNDID 53
             F I  +      +R + V+ N++N DT G+    +K F EV        D
Sbjct: 14 LNVFKIAYSMATHAGKRQALVSQNIANADTPGYNAKDIKPFKEVYAQGPRAGD 66


>gi|59712475|ref|YP_205251.1| flagellar hook-associated protein FlgK [Vibrio fischeri ES114]
 gi|59480576|gb|AAW86363.1| flagellar hook-associated protein 1, FlgK [Vibrio fischeri ES114]
          Length = 626

 Score = 40.2 bits (92), Expect = 0.23,   Method: Composition-based stats.
 Identities = 15/95 (15%), Positives = 39/95 (41%), Gaps = 2/95 (2%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA--IKNDIDQKISFVASG 62
            N+G    L  +++L+T + N++N +T GF    V     +       ++   +   A  
Sbjct: 6   LNLGTQGVLTAQRQLNTTSHNINNVNTEGFSRQSVVQDTNMPHWVSGANLGAGVHVAAVR 65

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALESPRG 97
           + +          + T L+++++ +A   + +   
Sbjct: 66  RSFDQFATNELNLSTTNLNYSMDTEANLDVLTNMM 100



 Score = 37.9 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 5/38 (13%), Positives = 16/38 (42%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           S  N   E   M+   Q + + + ++   +++    ++
Sbjct: 587 SGVNLDEEAANMMKFQQAYMASSRIMKAADETFNSILQ 624


>gi|322435945|ref|YP_004218157.1| flagellar hook-associated protein FlgK [Acidobacterium sp.
          MP5ACTX9]
 gi|321163672|gb|ADW69377.1| flagellar hook-associated protein FlgK [Acidobacterium sp.
          MP5ACTX9]
          Length = 469

 Score = 40.2 bits (92), Expect = 0.23,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 1/43 (2%)

Query: 2  QTSFN-IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
           +S   +   A  A +  L+T A+N++N +TVG+    V F+ 
Sbjct: 4  LSSLYDLSRGALQADQVALTTTANNVANQNTVGYTRQVVTFAS 46


>gi|296330832|ref|ZP_06873307.1| flagellar basal body rod protein FlgB [Bacillus subtilis subsp.
          spizizenii ATCC 6633]
 gi|305674350|ref|YP_003866022.1| flagellar component of cell-proximal portion of basal-body rod
          [Bacillus subtilis subsp. spizizenii str. W23]
 gi|296151837|gb|EFG92711.1| flagellar basal body rod protein FlgB [Bacillus subtilis subsp.
          spizizenii ATCC 6633]
 gi|305412594|gb|ADM37713.1| flagellar component of cell-proximal portion of basal-body rod
          [Bacillus subtilis subsp. spizizenii str. W23]
          Length = 129

 Score = 40.2 bits (92), Expect = 0.23,   Method: Composition-based stats.
 Identities = 7/35 (20%), Positives = 18/35 (51%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          +   + +N++N DT  ++  KV F  ++    + +
Sbjct: 21 KQKVITNNIANIDTPNYKAKKVSFQNLLDQESSRL 55


>gi|283833633|ref|ZP_06353374.1| flagellar basal-body rod protein FlgB [Citrobacter youngae ATCC
          29220]
 gi|291071316|gb|EFE09425.1| flagellar basal-body rod protein FlgB [Citrobacter youngae ATCC
          29220]
          Length = 138

 Score = 40.2 bits (92), Expect = 0.23,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 26/66 (39%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   +A N++N DT G++   + F+  +  +     ++   V+          
Sbjct: 15 ALNLRAQRQEILAANIANADTPGYQARDLDFASELKKVMVRGREQTGGVSLTLTSAQHIP 74

Query: 71 GSFIST 76
             +ST
Sbjct: 75 AQTVST 80


>gi|310816851|ref|YP_003964815.1| flagellar hook-associated protein [Ketogulonicigenium vulgare
          Y25]
 gi|308755586|gb|ADO43515.1| flagellar hook-associated protein [Ketogulonicigenium vulgare
          Y25]
          Length = 468

 Score = 40.2 bits (92), Expect = 0.24,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 24/81 (29%), Gaps = 1/81 (1%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
          S    L+   A+ ++   ++ N+SN  T G+   +V  S             +  V    
Sbjct: 6  SLGNALSGLAAVSRQTEVISSNISNALTEGYARREVALSAS-SIGGRGAGVTVDGVTRAV 64

Query: 64 EYLSKEVGSFISTGTELDFAL 84
                      T      AL
Sbjct: 65 NAAITADRRAAQTHMSGALAL 85


>gi|322432999|ref|YP_004210248.1| flagellar basal-body rod protein FlgB [Acidobacterium sp.
          MP5ACTX9]
 gi|321165226|gb|ADW70930.1| flagellar basal-body rod protein FlgB [Acidobacterium sp.
          MP5ACTX9]
          Length = 117

 Score = 40.2 bits (92), Expect = 0.24,   Method: Composition-based stats.
 Identities = 14/36 (38%), Positives = 20/36 (55%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
          R  T+A NM+N DT G+RT  V F + +    +  D
Sbjct: 21 REQTIASNMANVDTPGYRTKDVNFKQAMMTASSGAD 56


>gi|326202856|ref|ZP_08192723.1| flagellar hook-associated protein FlgK [Clostridium papyrosolvens
           DSM 2782]
 gi|325986933|gb|EGD47762.1| flagellar hook-associated protein FlgK [Clostridium papyrosolvens
           DSM 2782]
          Length = 707

 Score = 40.2 bits (92), Expect = 0.24,   Method: Composition-based stats.
 Identities = 6/41 (14%), Positives = 18/41 (43%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  +   EM  M+     +++ + +++  +  M   I ++ 
Sbjct: 663 SGVSMDEEMSNMMKYKFAYDASSRVLNVMDSMMETIITSLG 703



 Score = 39.9 bits (91), Expect = 0.33,   Method: Composition-based stats.
 Identities = 12/75 (16%), Positives = 22/75 (29%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
          +S+ I  +     E+ L     N+SN  T GF   +          +   + K+     G
Sbjct: 6  SSYEIARSGLKVSERGLFVTGHNLSNIQTPGFTRQQAIIETNPYITEYGKNGKLFQYGLG 65

Query: 63 KEYLSKEVGSFISTG 77
           +             
Sbjct: 66 ADIQETRQIRHTFLD 80


>gi|113969603|ref|YP_733396.1| flagellar basal body rod protein FlgB [Shewanella sp. MR-4]
 gi|114046835|ref|YP_737385.1| flagellar basal body rod protein FlgB [Shewanella sp. MR-7]
 gi|113884287|gb|ABI38339.1| flagellar basal-body rod protein FlgB [Shewanella sp. MR-4]
 gi|113888277|gb|ABI42328.1| flagellar basal-body rod protein FlgB [Shewanella sp. MR-7]
          Length = 135

 Score = 40.2 bits (92), Expect = 0.24,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 23/59 (38%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76
          R   ++ N++N DT  ++   V FS  +   K    Q+ S   +G E     +      
Sbjct: 22 RAEVISSNIANADTPHYKARDVDFSAALNVAKTQQQQRNSLEMTGDEQQHFGLAQLTGQ 80


>gi|209884510|ref|YP_002288367.1| flagellar hook-associated protein FlgK [Oligotropha
          carboxidovorans OM5]
 gi|209872706|gb|ACI92502.1| flagellar hook-associated protein FlgK [Oligotropha
          carboxidovorans OM5]
          Length = 624

 Score = 40.2 bits (92), Expect = 0.24,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 24/79 (30%), Gaps = 1/79 (1%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGF-RTIKVKFSEVVGAIKNDIDQKISFVAS 61
           +    ++   A +  L+ VA N+SN +T G+ R    +     G   + +         
Sbjct: 5  QALATAMSGLRANQAALALVASNVSNIETPGYVRKSLNQAQTTTGTGSSGVIVTGVNREL 64

Query: 62 GKEYLSKEVGSFISTGTEL 80
                + +          
Sbjct: 65 NVYVQKQVLTETSGASYAT 83



 Score = 40.2 bits (92), Expect = 0.28,   Method: Composition-based stats.
 Identities = 17/202 (8%), Positives = 50/202 (24%), Gaps = 3/202 (1%)

Query: 43  EVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTR 102
           +++    +     +   AS    +    G        +D  +           +   L  
Sbjct: 423 DLLNISGDAGGATVVGSASSTITIRDLAGGDPQLPLFVDNGVPYTGAITATGSQQTGLAA 482

Query: 103 DGRFKV---TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG 159
                     D   +V  +         +  +                 +  G       
Sbjct: 483 RISVNNLLLADPSRMVIYNTTPTTQAGDTTRVDFILSQLTQGSYYVSPQTGIGSSATPFK 542

Query: 160 LYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
              +   Q F   +    +        +++   T++      S  N   EM  ++ L   
Sbjct: 543 GTMLGFLQQFTTMQGQAAASAKQLADGQNVVLSTLQNKLNATSGVNIDEEMAHLLALQNA 602

Query: 220 FNSITTLIDENEKSMLEAIRNI 241
           +++   ++   +      +R++
Sbjct: 603 YSANARVMSTVKDMFDSLLRSM 624


>gi|317406204|gb|EFV86453.1| flagellar basal-body rod protein [Achromobacter xylosoxidans C54]
          Length = 135

 Score = 40.2 bits (92), Expect = 0.24,   Method: Composition-based stats.
 Identities = 7/57 (12%), Positives = 16/57 (28%), Gaps = 2/57 (3%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLS 67
             A   R   ++ N++N DT  ++     F   +        +      +      
Sbjct: 17 GLRAQ--RQEVLSSNIANADTPNYKARDFDFKAAMQNAMEGSKRLPDTSLTLTSARH 71


>gi|163750573|ref|ZP_02157811.1| flagellar basal-body rod protein FlgB [Shewanella benthica KT99]
 gi|161329728|gb|EDQ00717.1| flagellar basal-body rod protein FlgB [Shewanella benthica KT99]
          Length = 132

 Score = 40.2 bits (92), Expect = 0.24,   Method: Composition-based stats.
 Identities = 9/60 (15%), Positives = 22/60 (36%)

Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76
          +R   +A N++N DT  ++   V F + + A  +         +  + +    +      
Sbjct: 21 KRAEVIASNIANADTPHYKARDVNFDKALQAATSRQGGLAMSRSDSRHFDLTALSQQNYG 80


>gi|225159034|ref|ZP_03725344.1| flagellar basal-body rod protein FlgB [Opitutaceae bacterium
          TAV2]
 gi|224802413|gb|EEG20675.1| flagellar basal-body rod protein FlgB [Opitutaceae bacterium
          TAV2]
          Length = 144

 Score = 40.2 bits (92), Expect = 0.24,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 27/72 (37%), Gaps = 2/72 (2%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVK--FSEVVGAIKNDIDQKISFVASGKEYLSKE 69
            A   R   +A N++N +T GFR + V   F+  + A  N+     S      +   + 
Sbjct: 28 LDAAVLRQEAIASNIANAETPGFRRLDVSSDFAATLRARFNEAAASGSERVQMSDLTPRL 87

Query: 70 VGSFISTGTELD 81
          +    +     D
Sbjct: 88 MEDASARTVRPD 99


>gi|237731004|ref|ZP_04561485.1| flagellar basal body rod protein FlgB [Citrobacter sp. 30_2]
 gi|226906543|gb|EEH92461.1| flagellar basal body rod protein FlgB [Citrobacter sp. 30_2]
          Length = 138

 Score = 40.2 bits (92), Expect = 0.24,   Method: Composition-based stats.
 Identities = 12/66 (18%), Positives = 25/66 (37%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   +A N++N DT G++   + F+  +  +     ++   V+          
Sbjct: 15 ALNLRAQRQEILAANIANADTPGYQARDLDFASELKKVMVRGREETGGVSLTLTSAQHIP 74

Query: 71 GSFIST 76
             +S 
Sbjct: 75 AQTVSA 80


>gi|324325756|gb|ADY21016.1| flagellar hook-associated protein FlgK [Bacillus thuringiensis
          serovar finitimus YBT-020]
          Length = 432

 Score = 40.2 bits (92), Expect = 0.24,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 25/53 (47%)

Query: 6  NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
          N  L+  LA +  L T   N+SN  T G+    V +  V  +  +  +Q+I +
Sbjct: 7  NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSVGASNGHTPEQRIGY 59



 Score = 38.3 bits (87), Expect = 0.86,   Method: Composition-based stats.
 Identities = 5/34 (14%), Positives = 11/34 (32%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
            N   EM  ++   + F + +  I    +     
Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427


>gi|323498423|ref|ZP_08103419.1| flagellar basal body rod protein FlgB [Vibrio sinaloensis DSM
          21326]
 gi|323316496|gb|EGA69511.1| flagellar basal body rod protein FlgB [Vibrio sinaloensis DSM
          21326]
          Length = 131

 Score = 40.2 bits (92), Expect = 0.24,   Method: Composition-based stats.
 Identities = 6/38 (15%), Positives = 20/38 (52%)

Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
          E+    ++ N++  +T G+++  + F + + A  ++  
Sbjct: 20 ERNAEVISTNIAQANTPGYKSKGMDFQKALQAATSEAS 57


>gi|264676567|ref|YP_003276473.1| flagellar basal-body rod protein FlgB [Comamonas testosteroni
          CNB-2]
 gi|299531289|ref|ZP_07044699.1| flagellar basal-body rod protein FlgB [Comamonas testosteroni
          S44]
 gi|262207079|gb|ACY31177.1| flagellar basal-body rod protein FlgB [Comamonas testosteroni
          CNB-2]
 gi|298720696|gb|EFI61643.1| flagellar basal-body rod protein FlgB [Comamonas testosteroni
          S44]
          Length = 137

 Score = 40.2 bits (92), Expect = 0.24,   Method: Composition-based stats.
 Identities = 12/66 (18%), Positives = 23/66 (34%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A L   +R   +A N++N DT G+      F E + A  +          +   ++  + 
Sbjct: 15 ALLLRAERQRAIASNIANADTPGYVARDFNFREALMAATSGPKPLTQASVTTAGHIPLQA 74

Query: 71 GSFIST 76
                
Sbjct: 75 QMSDEA 80


>gi|148256817|ref|YP_001241402.1| putative flagellar hook-associated protein FlgK [Bradyrhizobium
          sp. BTAi1]
 gi|146408990|gb|ABQ37496.1| putative flagellar hook-associated protein 1 (HAP1, FlgK protein)
          [Bradyrhizobium sp. BTAi1]
          Length = 611

 Score = 40.2 bits (92), Expect = 0.24,   Method: Composition-based stats.
 Identities = 11/73 (15%), Positives = 26/73 (35%)

Query: 9  LAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSK 68
          ++   + +  LS ++ N++N +T G+        EV                    ++  
Sbjct: 1  MSGLRSTQAALSIISSNVANANTPGYVAQNPNQIEVASGGFGSTVMTTGVNRQLDLFVQN 60

Query: 69 EVGSFISTGTELD 81
          ++ +  S G   D
Sbjct: 61 QLRTETSGGAYAD 73



 Score = 36.8 bits (83), Expect = 2.4,   Method: Composition-based stats.
 Identities = 5/36 (13%), Positives = 15/36 (41%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            N   EM  +I +   +++   ++   +  M   ++
Sbjct: 573 VNMDSEMSNLIQVQNTYSANAHIMSVVQSMMQSLLQ 608


>gi|301644994|ref|ZP_07244960.1| flagellar hook-associated protein FlgK [Escherichia coli MS
          146-1]
 gi|301076723|gb|EFK91529.1| flagellar hook-associated protein FlgK [Escherichia coli MS
          146-1]
          Length = 293

 Score = 40.2 bits (92), Expect = 0.25,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|256833243|ref|YP_003161970.1| flagellar basal body rod protein [Jonesia denitrificans DSM
          20603]
 gi|256686774|gb|ACV09667.1| flagellar basal body rod protein [Jonesia denitrificans DSM
          20603]
          Length = 134

 Score = 40.2 bits (92), Expect = 0.25,   Method: Composition-based stats.
 Identities = 8/29 (27%), Positives = 14/29 (48%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTV 32
          +  I         + L  V+DN++N +TV
Sbjct: 6  AIGIASTGLTVNRKWLDAVSDNLANVNTV 34



 Score = 37.5 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 44/140 (31%), Gaps = 10/140 (7%)

Query: 100 LTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG 159
           +T  G   +   G  V+      V D  +    +   DE             G    T G
Sbjct: 1   MTTFGAIGIASTGLTVNRKWLDAVSDNLANVNTVRPTDEEAFQARYVIAQAAGGPRDTAG 60

Query: 160 LYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219
                +  G       G     P  PL D        G++   + +   +M Q+I   + 
Sbjct: 61  TQVAGIELG----SAEGRLVYEPDHPLADEG------GYVRYPDIDLSSQMSQLIMAQRG 110

Query: 220 FNSITTLIDENEKSMLEAIR 239
           + + T +++    +  +A+ 
Sbjct: 111 YQASTAVVERARATYEQALS 130


>gi|83858796|ref|ZP_00952318.1| flagellar basal-body rod protein [Oceanicaulis alexandrii HTCC2633]
 gi|83853619|gb|EAP91471.1| flagellar basal-body rod protein [Oceanicaulis alexandrii HTCC2633]
          Length = 138

 Score = 40.2 bits (92), Expect = 0.25,   Method: Composition-based stats.
 Identities = 10/70 (14%), Positives = 27/70 (38%), Gaps = 6/70 (8%)

Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232
           E+       P  P  D        G+++  N +S+ E+  M    + + +  T+++   +
Sbjct: 74  ESDFRMVYEPGHPAADGE------GYVKYPNVSSLVELMDMRDAQRSYEANLTMVEGTRR 127

Query: 233 SMLEAIRNIA 242
            +   +  + 
Sbjct: 128 MLERTLDLLR 137



 Score = 38.3 bits (87), Expect = 0.89,   Method: Composition-based stats.
 Identities = 9/103 (8%), Positives = 26/103 (25%), Gaps = 8/103 (7%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVV-GAIKNDIDQKI 56
             I  A   A   R+  +A+N++N ++         ++     F       +  ++ +  
Sbjct: 9   LQISAAGLRAQSSRMRVIAENVANAESTARTPEENPYQRQIPVFESEFDRQVGTELVRMN 68

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
                  ++         +   E        +           
Sbjct: 69  DVALDESDFRMVYEPGHPAADGEGYVKYPNVSSLVELMDMRDA 111


>gi|254785378|ref|YP_003072807.1| flagellar hook-associated protein FlgK [Teredinibacter turnerae
          T7901]
 gi|237685158|gb|ACR12422.1| flagellar hook-associated protein FlgK [Teredinibacter turnerae
          T7901]
          Length = 1060

 Score = 40.2 bits (92), Expect = 0.25,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 27/92 (29%), Gaps = 3/92 (3%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
              I +    A +  LST   N+SN    G+   +V                     + 
Sbjct: 4  NLLGISITGLRAAQASLSTTGHNISNAGVEGYSRQRVNIETNPATFN---GSHYIGSGAN 60

Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALES 94
           + + +    F+S     D AL  D     + 
Sbjct: 61 IQEIERFANDFVSEQLRQDSALAADMNIYYDY 92



 Score = 37.9 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 21/169 (12%), Positives = 38/169 (22%), Gaps = 2/169 (1%)

Query: 74   ISTGTELDFALEGDAWFALESPRGIIL--TRDGRFKVTDDGSLVSASGKYPVLDMASVPI 131
            ++ G  LD  L          P  +I   TR   F  +    + +     P         
Sbjct: 891  MTVGGRLDVTLAEGMSLGTFPPESMIFGDTRVADFAKSAYVGIQAELAGIPDTGDTFTLD 950

Query: 132  QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSG 191
                                GK++        +     V       +         +   
Sbjct: 951  FNWDAASDSRNAMDLVNLATGKLVGGGVASLSESYGALVESVGIDAAAAKINAEAAEQVL 1010

Query: 192  VTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
                +     S  N   E   +I   Q +++ T +I          I  
Sbjct: 1011 SQTTQMRDSLSGVNLDEEAANLIRFEQLYSANTQVISVARDLFDRLINT 1059


>gi|229029423|ref|ZP_04185506.1| Flagellar basal-body rod protein [Bacillus cereus AH1271]
 gi|228731882|gb|EEL82781.1| Flagellar basal-body rod protein [Bacillus cereus AH1271]
          Length = 135

 Score = 40.2 bits (92), Expect = 0.25,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 20/34 (58%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV 45
             L  + +TV+ N++N +T G++   V F+E +
Sbjct: 12 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQM 45


>gi|238796909|ref|ZP_04640413.1| Flagellar hook-associated protein [Yersinia mollaretii ATCC
          43969]
 gi|238719169|gb|EEQ10981.1| Flagellar hook-associated protein [Yersinia mollaretii ATCC
          43969]
          Length = 547

 Score = 40.2 bits (92), Expect = 0.25,   Method: Composition-based stats.
 Identities = 9/57 (15%), Positives = 21/57 (36%), Gaps = 4/57 (7%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
              N+  +   + +  L+ V +N++N  T G+    +    ++G           F
Sbjct: 1  MNLINLAQSGLSSAQSALNVVGNNINNAVTPGYSRQNI----MLGQAGGKTTNVGFF 53


>gi|320354314|ref|YP_004195653.1| flagellar basal-body rod protein FlgB [Desulfobulbus propionicus
          DSM 2032]
 gi|320122816|gb|ADW18362.1| flagellar basal-body rod protein FlgB [Desulfobulbus propionicus
          DSM 2032]
          Length = 137

 Score = 40.2 bits (92), Expect = 0.25,   Method: Composition-based stats.
 Identities = 5/40 (12%), Positives = 14/40 (35%)

Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56
          +    +  N++N +T G+      F + + +         
Sbjct: 23 KNQEVIGSNIANAETPGYSAQAFSFEDQLKSAMTGQGLHP 62


>gi|228933027|ref|ZP_04095890.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
          andalousiensis BGSC 4AW1]
 gi|229090704|ref|ZP_04221937.1| Flagellar basal-body rod protein [Bacillus cereus Rock3-42]
 gi|228692646|gb|EEL46372.1| Flagellar basal-body rod protein [Bacillus cereus Rock3-42]
 gi|228826628|gb|EEM72399.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
          andalousiensis BGSC 4AW1]
          Length = 138

 Score = 40.2 bits (92), Expect = 0.25,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 29/72 (40%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
             L  + +TV+ N++N +T G++   V F+E +           + + S  +       
Sbjct: 15 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNEM 74

Query: 72 SFISTGTELDFA 83
             +  T+  +A
Sbjct: 75 HLPTVNTKNTYA 86


>gi|221069325|ref|ZP_03545430.1| flagellar basal-body rod protein FlgB [Comamonas testosteroni
          KF-1]
 gi|220714348|gb|EED69716.1| flagellar basal-body rod protein FlgB [Comamonas testosteroni
          KF-1]
          Length = 137

 Score = 40.2 bits (92), Expect = 0.25,   Method: Composition-based stats.
 Identities = 12/66 (18%), Positives = 23/66 (34%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A L   +R   +A N++N DT G+      F E + A  +          +   ++  + 
Sbjct: 15 ALLLRAERQRAIASNIANADTPGYVARDFNFREALMAATSGPKPLTQASVTTAGHIPLQA 74

Query: 71 GSFIST 76
                
Sbjct: 75 QMSDEA 80


>gi|75761145|ref|ZP_00741137.1| Flagellar basal-body rod protein flgB [Bacillus thuringiensis
          serovar israelensis ATCC 35646]
 gi|228900325|ref|ZP_04064555.1| Flagellar basal-body rod protein [Bacillus thuringiensis IBL
          4222]
 gi|74491373|gb|EAO54597.1| Flagellar basal-body rod protein flgB [Bacillus thuringiensis
          serovar israelensis ATCC 35646]
 gi|228859360|gb|EEN03790.1| Flagellar basal-body rod protein [Bacillus thuringiensis IBL
          4222]
          Length = 138

 Score = 40.2 bits (92), Expect = 0.25,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 28/72 (38%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
             L  + +TV+ N++N +T G++   V F+E +           + + S  +       
Sbjct: 15 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNEM 74

Query: 72 SFISTGTELDFA 83
             +   +  +A
Sbjct: 75 HLPTVNMKNTYA 86


>gi|311280020|ref|YP_003942251.1| flagellar basal-body rod protein FlgB [Enterobacter cloacae SCF1]
 gi|308749215|gb|ADO48967.1| flagellar basal-body rod protein FlgB [Enterobacter cloacae SCF1]
          Length = 138

 Score = 40.2 bits (92), Expect = 0.25,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 27/66 (40%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   +A N++N+DT G++   + F+  +  + +    + S V+          
Sbjct: 15 ALNLRAQRQEILAANIANSDTPGYQARDIDFASELKKVMDRGRAETSGVSLALTSERHIP 74

Query: 71 GSFIST 76
             +S 
Sbjct: 75 AQTMSA 80


>gi|228920454|ref|ZP_04083799.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
          huazhongensis BGSC 4BD1]
 gi|229178152|ref|ZP_04305523.1| Flagellar basal-body rod protein [Bacillus cereus 172560W]
 gi|228605282|gb|EEK62732.1| Flagellar basal-body rod protein [Bacillus cereus 172560W]
 gi|228839084|gb|EEM84380.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar
          huazhongensis BGSC 4BD1]
          Length = 138

 Score = 40.2 bits (92), Expect = 0.25,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 29/72 (40%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
             L  + +TV+ N++N +T G++   V F+E +           + + S  +       
Sbjct: 15 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNEM 74

Query: 72 SFISTGTELDFA 83
             +  T+  +A
Sbjct: 75 HLPTVNTKNTYA 86


>gi|207111252|ref|ZP_03245414.1| flagellar basal body rod protein FlgG [Helicobacter pylori
          HPKX_438_CA4C1]
          Length = 27

 Score = 40.2 bits (92), Expect = 0.26,   Method: Composition-based stats.
 Identities = 6/27 (22%), Positives = 13/27 (48%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMS 27
          M  S     +  LA +  + T ++N++
Sbjct: 1  MLRSLYSATSGMLAQQTHIDTTSNNIA 27


>gi|163802606|ref|ZP_02196498.1| flagellar basal body protein [Vibrio sp. AND4]
 gi|159173689|gb|EDP58508.1| flagellar basal body protein [Vibrio sp. AND4]
          Length = 131

 Score = 40.2 bits (92), Expect = 0.26,   Method: Composition-based stats.
 Identities = 6/38 (15%), Positives = 20/38 (52%)

Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
          E+    ++ N++  +T G+++  + F++ + A  +   
Sbjct: 20 ERNAEVISTNIAQANTPGYKSRGLDFAKELQAATSGAS 57


>gi|170725952|ref|YP_001759978.1| flagellar basal body rod protein FlgB [Shewanella woodyi ATCC
          51908]
 gi|169811299|gb|ACA85883.1| flagellar basal-body rod protein FlgB [Shewanella woodyi ATCC
          51908]
          Length = 132

 Score = 40.2 bits (92), Expect = 0.26,   Method: Composition-based stats.
 Identities = 9/61 (14%), Positives = 22/61 (36%)

Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIS 75
           QR   ++ N++N DT  ++   + F + + A  +         +  K +    +     
Sbjct: 20 SQRAEVISSNIANADTPHYKARDIDFDKALQAATSQQRGLAMTGSDSKHFDLAALSEQHY 79

Query: 76 T 76
           
Sbjct: 80 G 80


>gi|320179227|gb|EFW54185.1| Flagellar basal-body rod protein FlgB [Shigella boydii ATCC 9905]
          Length = 138

 Score = 40.2 bits (92), Expect = 0.26,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 22/62 (35%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   +A N++N DT G++   + F+  +  +        S VA          
Sbjct: 15 ALNLRAQRQEVLAANIANADTPGYQARDIDFASELKKVMQRGRDATSVVALTMTSTQHIP 74

Query: 71 GS 72
            
Sbjct: 75 AQ 76


>gi|226327749|ref|ZP_03803267.1| hypothetical protein PROPEN_01622 [Proteus penneri ATCC 35198]
 gi|225203453|gb|EEG85807.1| hypothetical protein PROPEN_01622 [Proteus penneri ATCC 35198]
          Length = 136

 Score = 40.2 bits (92), Expect = 0.26,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 20/66 (30%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     +R   +A N++N DT GF+   + F+  +     +       +           
Sbjct: 15 ALSIRNKRQEILAANIANADTPGFQARDIDFASELKKTIENGRTGSHGMQLAMTSERHIP 74

Query: 71 GSFIST 76
                
Sbjct: 75 IKPGYR 80


>gi|225863602|ref|YP_002748980.1| flagellar basal-body rod protein FlgB [Bacillus cereus 03BB102]
 gi|229183935|ref|ZP_04311151.1| Flagellar basal-body rod protein [Bacillus cereus BGSC 6E1]
 gi|225786134|gb|ACO26351.1| flagellar basal-body rod protein FlgB [Bacillus cereus 03BB102]
 gi|228599587|gb|EEK57191.1| Flagellar basal-body rod protein [Bacillus cereus BGSC 6E1]
          Length = 135

 Score = 40.2 bits (92), Expect = 0.26,   Method: Composition-based stats.
 Identities = 10/32 (31%), Positives = 19/32 (59%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
             L  + +TV+ N++N +T G++   V F+E
Sbjct: 12 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAE 43


>gi|90423028|ref|YP_531398.1| flagellar basal body rod protein FlgB [Rhodopseudomonas palustris
          BisB18]
 gi|90105042|gb|ABD87079.1| flagellar basal body rod protein [Rhodopseudomonas palustris
          BisB18]
          Length = 136

 Score = 40.2 bits (92), Expect = 0.26,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 16/24 (66%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFR 35
              ++R   +ADN++N+DT GF+
Sbjct: 16 MQWHQERQRVLADNIANSDTPGFK 39


>gi|156973583|ref|YP_001444490.1| flagellar basal body rod protein FlgB [Vibrio harveyi ATCC
          BAA-1116]
 gi|156525177|gb|ABU70263.1| hypothetical protein VIBHAR_01286 [Vibrio harveyi ATCC BAA-1116]
          Length = 131

 Score = 40.2 bits (92), Expect = 0.27,   Method: Composition-based stats.
 Identities = 6/38 (15%), Positives = 20/38 (52%)

Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
          E+    ++ N++  +T G+++  + F++ + A  +   
Sbjct: 20 ERNTEVISTNIAQANTPGYKSRGLDFAKELQAATSGAS 57


>gi|323490135|ref|ZP_08095355.1| flagellar hook-associated protein FlgK [Planococcus donghaensis
           MPA1U2]
 gi|323396183|gb|EGA89009.1| flagellar hook-associated protein FlgK [Planococcus donghaensis
           MPA1U2]
          Length = 422

 Score = 40.2 bits (92), Expect = 0.27,   Method: Composition-based stats.
 Identities = 6/39 (15%), Positives = 16/39 (41%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            +   EM  ++     +N+   L+   ++ +   I  +A
Sbjct: 383 VSLDEEMANLVKYQHSYNAAARLVSMTDQMLDTIINRMA 421



 Score = 36.4 bits (82), Expect = 3.9,   Method: Composition-based stats.
 Identities = 9/37 (24%), Positives = 16/37 (43%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
             +G       +  LST   N++N +T G+   +V 
Sbjct: 7  GLELGKRGLSVGQASLSTTGQNIANVNTKGYSRQQVN 43


>gi|293605000|ref|ZP_06687396.1| flagellar basal-body rod protein FlgB [Achromobacter piechaudii
          ATCC 43553]
 gi|292816605|gb|EFF75690.1| flagellar basal-body rod protein FlgB [Achromobacter piechaudii
          ATCC 43553]
          Length = 135

 Score = 40.2 bits (92), Expect = 0.27,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 16/48 (33%), Gaps = 2/48 (4%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          F        A   R   ++ N++N DT  ++     F   +     D 
Sbjct: 11 FYQQALGLRAQ--RQEVLSSNIANADTPNYKARDFDFKTAMQNAMEDS 56


>gi|197336362|ref|YP_002156694.1| flagellar hook-associated protein FlgK [Vibrio fischeri MJ11]
 gi|197317852|gb|ACH67299.1| flagellar hook-associated protein FlgK [Vibrio fischeri MJ11]
          Length = 626

 Score = 40.2 bits (92), Expect = 0.27,   Method: Composition-based stats.
 Identities = 15/95 (15%), Positives = 38/95 (40%), Gaps = 2/95 (2%)

Query: 5   FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA--IKNDIDQKISFVASG 62
            N+G    L  +++L+T + N++N +T GF    V     +       +    +   A  
Sbjct: 6   LNLGTQGVLTAQRQLNTTSHNINNVNTEGFSRQSVVQDTNMPHWVSGANFGAGVHVAAVR 65

Query: 63  KEYLSKEVGSFISTGTELDFALEGDAWFALESPRG 97
           + +          + T L+++++ +A   + +   
Sbjct: 66  RSFDQFATNELNLSTTNLNYSMDTEANLDVLTNMM 100



 Score = 37.9 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 5/38 (13%), Positives = 16/38 (42%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           S  N   E   M+   Q + + + ++   +++    ++
Sbjct: 587 SGVNLDEEAANMMKFQQAYMASSRIMKAADETFNSILQ 624


>gi|34497156|ref|NP_901371.1| flagellar basal-body rod protein flgB [Chromobacterium violaceum
           ATCC 12472]
 gi|34103013|gb|AAQ59376.1| probable flagellar basal-body rod protein flgB [Chromobacterium
           violaceum ATCC 12472]
          Length = 117

 Score = 40.2 bits (92), Expect = 0.27,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 38/100 (38%), Gaps = 2/100 (2%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
             + +I   A      R   +A N++N +T G++   + F   + +   D    ++F   
Sbjct: 4   DKALSIHPEALRLRADRTRVLASNIANENTPGYQARDIDFKAALASAAADSP--LAFDDG 61

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101
           G + L +        G  ++ ++E   +    S     LT
Sbjct: 62  GGDLLYRLPNHPSRDGNTVELSVEQAEFSQNVSEFQTSLT 101


>gi|15895434|ref|NP_348783.1| flagellar basal body rod protein FlgB [Clostridium acetobutylicum
          ATCC 824]
 gi|15025158|gb|AAK80123.1|AE007716_12 Flagellar basal-body rod protein FlgB [Clostridium acetobutylicum
          ATCC 824]
 gi|325509580|gb|ADZ21216.1| flagellar basal body rod protein FlgB [Clostridium acetobutylicum
          EA 2018]
          Length = 134

 Score = 40.2 bits (92), Expect = 0.27,   Method: Composition-based stats.
 Identities = 8/66 (12%), Positives = 25/66 (37%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
             A  +R   +++N++N +T  ++   V F + +    +++  + +      +  S   
Sbjct: 20 GLDATSERGKAISNNIANVNTKDYKRYYVSFEDNLKNSMDNLGMERTDSRHINDGASFGD 79

Query: 71 GSFIST 76
                
Sbjct: 80 IQLKQD 85


>gi|331652135|ref|ZP_08353154.1| flagellar hook-associated protein FlgK [Escherichia coli M718]
 gi|331050413|gb|EGI22471.1| flagellar hook-associated protein FlgK [Escherichia coli M718]
          Length = 547

 Score = 40.2 bits (92), Expect = 0.27,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIVAQANSTLGAGG 52


>gi|223040539|ref|ZP_03610811.1| flagellar hook-associated protein FlgK [Campylobacter rectus
          RM3267]
 gi|222878174|gb|EEF13283.1| flagellar hook-associated protein FlgK [Campylobacter rectus
          RM3267]
          Length = 617

 Score = 40.2 bits (92), Expect = 0.27,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 30/81 (37%), Gaps = 2/81 (2%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK--FSEVVGAIKNDIDQKISFVA 60
          +S +IG+    A + +++T   N++N D   +   +V     E    I  DI        
Sbjct: 6  SSLHIGMTGLDAAQTQITTTGHNITNADNEHYTRQRVVQSAREAFHDIPGDIGTGTQVDT 65

Query: 61 SGKEYLSKEVGSFISTGTELD 81
            + +         ++   L+
Sbjct: 66 VVRVHDEFTFARLRTSNINLE 86



 Score = 39.9 bits (91), Expect = 0.29,   Method: Composition-based stats.
 Identities = 7/37 (18%), Positives = 14/37 (37%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N   E+  +I     + +   +I   EK +   +
Sbjct: 577 SGVNLNEELTNLIRFQSSYGAAAKIITTVEKMLDTLL 613


>gi|197285513|ref|YP_002151385.1| flagellar basal body rod protein FlgB [Proteus mirabilis HI4320]
 gi|227356004|ref|ZP_03840396.1| flagellar basal-body rod protein [Proteus mirabilis ATCC 29906]
 gi|194683000|emb|CAR43449.1| flagellar basal-body rod protein [Proteus mirabilis HI4320]
 gi|227163992|gb|EEI48894.1| flagellar basal-body rod protein [Proteus mirabilis ATCC 29906]
          Length = 137

 Score = 40.2 bits (92), Expect = 0.27,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 20/66 (30%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     +R   +A N++N DT GF+   + F+  +     +       +           
Sbjct: 15 ALSLRNKRQEILAANIANADTPGFQARDIDFAAELKKTMENGRTGSHGLQLTMTSERHIP 74

Query: 71 GSFIST 76
                
Sbjct: 75 IKPGYR 80


>gi|153834443|ref|ZP_01987110.1| flagellar basal-body rod protein FlgB [Vibrio harveyi HY01]
 gi|269961596|ref|ZP_06175958.1| Flagellar basal-body rod protein flgB [Vibrio harveyi 1DA3]
 gi|148869139|gb|EDL68171.1| flagellar basal-body rod protein FlgB [Vibrio harveyi HY01]
 gi|269833637|gb|EEZ87734.1| Flagellar basal-body rod protein flgB [Vibrio harveyi 1DA3]
          Length = 131

 Score = 40.2 bits (92), Expect = 0.28,   Method: Composition-based stats.
 Identities = 6/38 (15%), Positives = 20/38 (52%)

Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
          E+    ++ N++  +T G+++  + F++ + A  +   
Sbjct: 20 ERNAEVISTNIAQANTPGYKSRGLDFAKELQAATSGAS 57


>gi|119477956|ref|ZP_01618056.1| Flagellar basal body protein [marine gamma proteobacterium
          HTCC2143]
 gi|119448869|gb|EAW30111.1| Flagellar basal body protein [marine gamma proteobacterium
          HTCC2143]
          Length = 134

 Score = 40.2 bits (92), Expect = 0.28,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 28/80 (35%), Gaps = 4/80 (5%)

Query: 1  MQTSFNIGLA----AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56
          M  SF   L     A      R   +A+N+ N DT  F+   + F   + +  +      
Sbjct: 1  MAISFQNALGIHEKALHVRTMRAEVLANNLVNADTPNFKARDIDFKSALNSEMSSQSASR 60

Query: 57 SFVASGKEYLSKEVGSFIST 76
            VA+   ++     S+   
Sbjct: 61 GMVATNSRHIGGASQSYQPE 80


>gi|118477179|ref|YP_894330.1| flagellar basal body rod protein FlgB [Bacillus thuringiensis
          str. Al Hakam]
 gi|118416404|gb|ABK84823.1| flagellar basal-body rod protein [Bacillus thuringiensis str. Al
          Hakam]
          Length = 138

 Score = 40.2 bits (92), Expect = 0.28,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 20/34 (58%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV 45
             L  + +TV+ N++N +T G++   V F+E +
Sbjct: 15 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQM 48


>gi|304310891|ref|YP_003810489.1| Flagellar hook-associated protein 1 [gamma proteobacterium HdN1]
 gi|301796624|emb|CBL44836.1| Flagellar hook-associated protein 1 [gamma proteobacterium HdN1]
          Length = 668

 Score = 40.2 bits (92), Expect = 0.28,   Method: Composition-based stats.
 Identities = 19/157 (12%), Positives = 39/157 (24%), Gaps = 1/157 (0%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           M     IGL+  +  +  LST + N+ N  T G+   +V  S +   IK           
Sbjct: 1   MADITQIGLSGLMVSKSALSTTSHNIVNVGTDGYSRQRVDISAI-DPIKLGGKYIGQGAI 59

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
                             +       D++F        +L               ++   
Sbjct: 60  VNGISRITNTFLTDQLRRDTQNFNSYDSYFDFAGRVDSLLGDQSTAITPTLQGFFNSVQD 119

Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157
                 +    Q+   +          + ++      
Sbjct: 120 LNNDPASIPIRQVMLSEANALTNRFNTVYEQLYQQNQ 156


>gi|328543140|ref|YP_004303249.1| flagellar hook-associated protein FlgK [polymorphum gilvum
           SL003B-26A1]
 gi|326412886|gb|ADZ69949.1| Flagellar hook-associated protein FlgK [Polymorphum gilvum
           SL003B-26A1]
          Length = 617

 Score = 39.9 bits (91), Expect = 0.28,   Method: Composition-based stats.
 Identities = 3/38 (7%), Positives = 15/38 (39%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
            +   E+  +I L   + +   ++   ++     + ++
Sbjct: 580 VDVDAELAFLIELQNAYAANARVMQAAKEMFDVLLNSV 617


>gi|311068139|ref|YP_003973062.1| flagellar basal body rod protein FlgB [Bacillus atrophaeus 1942]
 gi|310868656|gb|ADP32131.1| flagellar basal body rod protein FlgB [Bacillus atrophaeus 1942]
          Length = 129

 Score = 39.9 bits (91), Expect = 0.28,   Method: Composition-based stats.
 Identities = 8/45 (17%), Positives = 20/45 (44%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54
           A      +   + +N++N DT  ++  KV F  ++    + ++ 
Sbjct: 13 NALGRANVKQKVITNNIANIDTPNYKAKKVSFQNLLNQESSRLES 57


>gi|260767920|ref|ZP_05876854.1| flagellar basal-body rod protein FlgB [Vibrio furnissii CIP 102972]
 gi|260615950|gb|EEX41135.1| flagellar basal-body rod protein FlgB [Vibrio furnissii CIP 102972]
 gi|315179623|gb|ADT86537.1| flagellar basal body rod protein [Vibrio furnissii NCTC 11218]
          Length = 120

 Score = 39.9 bits (91), Expect = 0.28,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 33/105 (31%), Gaps = 5/105 (4%)

Query: 1   MQTSFNIGLA----AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56
           M  SF   L     A     QR   +A N++N DT G+    + F  V+    N      
Sbjct: 1   MAISFETALGVHPEALNFRVQRTKVLASNLANVDTPGYLAKDLTFKTVMSTAGNRGVNPG 60

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101
                 +   S    +    G  ++  +E   +          LT
Sbjct: 61  IPEWQVESQYSIPYQNSK-NGNTVELGVEQAKFTQNNMDFQTSLT 104


>gi|255592868|ref|XP_002535736.1| conserved hypothetical protein [Ricinus communis]
 gi|223522123|gb|EEF26647.1| conserved hypothetical protein [Ricinus communis]
          Length = 274

 Score = 39.9 bits (91), Expect = 0.28,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 24/50 (48%), Gaps = 2/50 (4%)

Query: 11  AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
              A  Q L  +A N++N DT G++ + +  +E +   K+  D  + +  
Sbjct: 177 GLRAYRQEL--LASNIANADTPGYKAVDIDINEALRTGKSKDDAPLLYRM 224


>gi|329849688|ref|ZP_08264534.1| flagellar basal-body rod protein FlgB [Asticcacaulis biprosthecum
          C19]
 gi|328841599|gb|EGF91169.1| flagellar basal-body rod protein FlgB [Asticcacaulis biprosthecum
          C19]
          Length = 137

 Score = 39.9 bits (91), Expect = 0.28,   Method: Composition-based stats.
 Identities = 10/67 (14%), Positives = 21/67 (31%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69
          +       R   VA+N++N  T GF+   +   +    ++ +  Q    +          
Sbjct: 14 SRMGWHSDRQKVVAENVANASTPGFKPHDLSPQDFEKMVRGETPQGNLGLTMTNTQHMAP 73

Query: 70 VGSFIST 76
             F   
Sbjct: 74 ATPFSPG 80


>gi|221640830|ref|YP_002527092.1| flagellar basal body rod protein FlgB [Rhodobacter sphaeroides
          KD131]
 gi|221161611|gb|ACM02591.1| Flagellar basal-body rod protein FlgB [Rhodobacter sphaeroides
          KD131]
          Length = 127

 Score = 39.9 bits (91), Expect = 0.28,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 14/44 (31%), Gaps = 1/44 (2%)

Query: 8  GLAAQLALEQRLSTVADNMSNTDTVGFRT-IKVKFSEVVGAIKN 50
            +       R   VA N++N DT G+R      F         
Sbjct: 11 AQSMARHAGLRTEVVAHNLANADTPGYRAQDLPDFESYASGTVG 54


>gi|119384842|ref|YP_915898.1| flagellar basal body rod protein FlgB [Paracoccus denitrificans
          PD1222]
 gi|119374609|gb|ABL70202.1| flagellar basal-body rod protein FlgB [Paracoccus denitrificans
          PD1222]
          Length = 129

 Score = 39.9 bits (91), Expect = 0.28,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 27/76 (35%), Gaps = 8/76 (10%)

Query: 9  LAAQLALE-QRLSTVADNMSNTDTVGFR-TIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66
           ++  A   +R   +A N++N DT GFR      F+E   +         + + + +   
Sbjct: 11 ASSLTAHAVERQKLIARNVANADTPGFRSRDLAGFAETYRSHG------PTGMRASRPGH 64

Query: 67 SKEVGSFISTGTELDF 82
            E       G   D 
Sbjct: 65 LTEGRGGDGAGRITDA 80


>gi|251789165|ref|YP_003003886.1| flagellar basal-body rod protein FlgB [Dickeya zeae Ech1591]
 gi|247537786|gb|ACT06407.1| flagellar basal-body rod protein FlgB [Dickeya zeae Ech1591]
          Length = 139

 Score = 39.9 bits (91), Expect = 0.29,   Method: Composition-based stats.
 Identities = 11/65 (16%), Positives = 21/65 (32%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   +A N++N DT G++   + F+  +  +          V+          
Sbjct: 15 ALNLRAQRQEILAANIANADTPGYQARDIDFASELNKVMEKGRVDGQSVSLSLTSSRHIP 74

Query: 71 GSFIS 75
               
Sbjct: 75 AQTAQ 79


>gi|15801190|ref|NP_287207.1| flagellar basal body rod protein FlgB [Escherichia coli O157:H7
          EDL933]
 gi|15830705|ref|NP_309478.1| flagellar basal body rod protein FlgB [Escherichia coli O157:H7
          str. Sakai]
 gi|168747151|ref|ZP_02772173.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
          str. EC4113]
 gi|168758635|ref|ZP_02783642.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
          str. EC4401]
 gi|168764485|ref|ZP_02789492.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
          str. EC4501]
 gi|168767732|ref|ZP_02792739.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
          str. EC4486]
 gi|168773918|ref|ZP_02798925.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
          str. EC4196]
 gi|168783603|ref|ZP_02808610.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
          str. EC4076]
 gi|168790008|ref|ZP_02815015.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
          str. EC869]
 gi|168802018|ref|ZP_02827025.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
          str. EC508]
 gi|195935463|ref|ZP_03080845.1| flagellar basal body rod protein FlgB [Escherichia coli O157:H7
          str. EC4024]
 gi|208809503|ref|ZP_03251840.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
          str. EC4206]
 gi|208815239|ref|ZP_03256418.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
          str. EC4045]
 gi|208822644|ref|ZP_03262963.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
          str. EC4042]
 gi|209398681|ref|YP_002269919.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
          str. EC4115]
 gi|217328423|ref|ZP_03444505.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
          str. TW14588]
 gi|254792455|ref|YP_003077292.1| flagellar basal body rod protein FlgB [Escherichia coli O157:H7
          str. TW14359]
 gi|261227022|ref|ZP_05941303.1| flagellar component of cell-proximal portion of basal-body rod
          [Escherichia coli O157:H7 str. FRIK2000]
 gi|261256256|ref|ZP_05948789.1| flagellar component of cell-proximal portion of basal-body rod
          [Escherichia coli O157:H7 str. FRIK966]
 gi|291282093|ref|YP_003498911.1| Flagellar basal-body rod protein FlgB [Escherichia coli O55:H7
          str. CB9615]
 gi|12514611|gb|AAG55819.1|AE005317_8 flagellar biosynthesis, cell-proximal portion of basal-body rod
          [Escherichia coli O157:H7 str. EDL933]
 gi|13360915|dbj|BAB34874.1| flagellar rod protein FlgB [Escherichia coli O157:H7 str. Sakai]
 gi|187770374|gb|EDU34218.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
          str. EC4196]
 gi|188018167|gb|EDU56289.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
          str. EC4113]
 gi|188999105|gb|EDU68091.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
          str. EC4076]
 gi|189354564|gb|EDU72983.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
          str. EC4401]
 gi|189363078|gb|EDU81497.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
          str. EC4486]
 gi|189365535|gb|EDU83951.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
          str. EC4501]
 gi|189370453|gb|EDU88869.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
          str. EC869]
 gi|189375929|gb|EDU94345.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
          str. EC508]
 gi|208729304|gb|EDZ78905.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
          str. EC4206]
 gi|208731887|gb|EDZ80575.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
          str. EC4045]
 gi|208738129|gb|EDZ85812.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
          str. EC4042]
 gi|209160081|gb|ACI37514.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
          str. EC4115]
 gi|209773408|gb|ACI85016.1| flagellar rod protein FlgB [Escherichia coli]
 gi|209773410|gb|ACI85017.1| flagellar rod protein FlgB [Escherichia coli]
 gi|209773412|gb|ACI85018.1| flagellar rod protein FlgB [Escherichia coli]
 gi|209773414|gb|ACI85019.1| flagellar rod protein FlgB [Escherichia coli]
 gi|209773416|gb|ACI85020.1| flagellar rod protein FlgB [Escherichia coli]
 gi|217318850|gb|EEC27276.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
          str. TW14588]
 gi|254591855|gb|ACT71216.1| flagellar component of cell-proximal portion of basal-body rod
          [Escherichia coli O157:H7 str. TW14359]
 gi|290761966|gb|ADD55927.1| Flagellar basal-body rod protein FlgB [Escherichia coli O55:H7
          str. CB9615]
 gi|320189756|gb|EFW64412.1| Flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
          str. EC1212]
 gi|320637524|gb|EFX07324.1| flagellar basal body rod protein FlgB [Escherichia coli O157:H7
          str. G5101]
 gi|320643085|gb|EFX12286.1| flagellar basal body rod protein FlgB [Escherichia coli O157:H-
          str. 493-89]
 gi|320648543|gb|EFX17198.1| flagellar basal body rod protein FlgB [Escherichia coli O157:H-
          str. H 2687]
 gi|320653857|gb|EFX21931.1| flagellar basal body rod protein FlgB [Escherichia coli O55:H7
          str. 3256-97 TW 07815]
 gi|320659337|gb|EFX26906.1| flagellar basal body rod protein FlgB [Escherichia coli O55:H7
          str. USDA 5905]
 gi|320664472|gb|EFX31623.1| flagellar basal body rod protein FlgB [Escherichia coli O157:H7
          str. LSU-61]
 gi|326339295|gb|EGD63109.1| Flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
          str. 1125]
 gi|326344744|gb|EGD68492.1| Flagellar basal-body rod protein FlgB [Escherichia coli O157:H7
          str. 1044]
          Length = 138

 Score = 39.9 bits (91), Expect = 0.29,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 22/62 (35%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   +A N++N DT G++   + F+  +  +        S VA          
Sbjct: 15 ALNLRAQRQEVLAANIANADTPGYQARDIDFASELKKVMQRGRNATSVVALTMTSTQHIP 74

Query: 71 GS 72
            
Sbjct: 75 AQ 76


>gi|95928660|ref|ZP_01311407.1| Flagellar hook-associated protein [Desulfuromonas acetoxidans DSM
          684]
 gi|95135450|gb|EAT17102.1| Flagellar hook-associated protein [Desulfuromonas acetoxidans DSM
          684]
          Length = 465

 Score = 39.9 bits (91), Expect = 0.29,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 25/79 (31%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
          + N G    +  ++ +    +N++N  T G+    +K S       N I      V +  
Sbjct: 7  ALNTGKTGLMVSQKGIEVTGNNLTNASTEGYSRQVLKVSSSPALEHNGIIVGHGAVVTAI 66

Query: 64 EYLSKEVGSFISTGTELDF 82
                  +        D+
Sbjct: 67 ARQESVFVTKQLINKSGDY 85


>gi|315125990|ref|YP_004067993.1| lateral flagellar hook-associated protein [Pseudoalteromonas sp.
           SM9913]
 gi|315014504|gb|ADT67842.1| lateral flagellar hook-associated protein [Pseudoalteromonas sp.
           SM9913]
          Length = 435

 Score = 39.9 bits (91), Expect = 0.29,   Method: Composition-based stats.
 Identities = 6/38 (15%), Positives = 16/38 (42%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           S  N   E   ++H  Q +++   +I   ++     ++
Sbjct: 396 SGVNLDEEAANLMHFQQMYSANAKVISTADQMFKSLLQ 433



 Score = 39.5 bits (90), Expect = 0.38,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 16/42 (38%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
           +  N  L+   A    L+    N++N    G+   + +F  
Sbjct: 1  MSMLNNALSGLNAANIALTVSGQNVANAAVEGYSRQQAQFKT 42


>gi|47566121|ref|ZP_00237159.1| flagellar hook-associated protein 1, putative [Bacillus cereus
           G9241]
 gi|47557038|gb|EAL15368.1| flagellar hook-associated protein 1, putative [Bacillus cereus
           G9241]
          Length = 432

 Score = 39.9 bits (91), Expect = 0.29,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 33/101 (32%), Gaps = 6/101 (5%)

Query: 6   NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65
           N  L+  LA +  L T   N+SN  T G+    V +   VGA      ++          
Sbjct: 7   NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGS-VGASNGHTPEQRIGYGVQTLG 65

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106
           + +      +         +  + F+  +     L+R    
Sbjct: 66  VDRITDEVKTRQFN-----DQMSQFSYYAYMNSTLSRVESM 101



 Score = 39.1 bits (89), Expect = 0.55,   Method: Composition-based stats.
 Identities = 18/196 (9%), Positives = 43/196 (21%), Gaps = 4/196 (2%)

Query: 44  VVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103
           V+     D              L          G  +  A++  A               
Sbjct: 234 VLTVNGQDTYPLQLQKNKEPMSLQIYGTDIPLNGGAIQSAIDTKAKITGYKDNLNEFVNS 293

Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163
            + +V    +     G+       +            +      ++   +     GL   
Sbjct: 294 LKKQVNTVMNKDFFVGEDAKKLEINPDFTKDISKMKISAETANRLAGITEEDFKPGLTYK 353

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGVTVKR--GFLEDSNANSMYEMGQMIHLTQKFN 221
                 +    S  S       +       +++    +E    N   EM  ++   + F 
Sbjct: 354 QALDQLLVGVASDKSSVNAYQNIHKDLLEGIQQEKMSVEG--VNMEEEMVNLMAFQKYFV 411

Query: 222 SITTLIDENEKSMLEA 237
           + +  I    +     
Sbjct: 412 ANSKAITTMNEVFDSL 427


>gi|167725936|ref|ZP_02409172.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           DM98]
          Length = 452

 Score = 39.9 bits (91), Expect = 0.29,   Method: Composition-based stats.
 Identities = 23/195 (11%), Positives = 50/195 (25%), Gaps = 1/195 (0%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
                IG++   A  Q L   + N +N  T G+    V  S  +    +     +    S
Sbjct: 1   MNIIYIGMSGIRAANQSLLAASQNTANIATGGYSRRGVLLSTGLTGGVDASG-LLRLNES 59

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
            K     +               +        +P       +        G+L +ASG  
Sbjct: 60  YKTQQLWQAAGQYGRYDAAQTYFDQLEALFGGNPVDGKTQANDLGFGKFIGALEAASGDP 119

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
               + +  I             +  ++ + + I    + +V+   G  +          
Sbjct: 120 GDSVLRNGVIDAANSMTKQFNNMRSVLTNQLRSIEQQRVTTVEQVNGLAKTVAELNGKIA 179

Query: 182 PPTPLEDLSGVTVKR 196
                       + +
Sbjct: 180 AGQASGADVSALMDQ 194


>gi|194365325|ref|YP_002027935.1| hypothetical protein Smal_1547 [Stenotrophomonas maltophilia
          R551-3]
 gi|194348129|gb|ACF51252.1| conserved hypothetical protein [Stenotrophomonas maltophilia
          R551-3]
          Length = 99

 Score = 39.9 bits (91), Expect = 0.29,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 13/32 (40%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32
          M     I L+     +Q +   A N++N  T 
Sbjct: 1  MNNVMGIALSGMRVAQQGVQVAAHNVANLATP 32


>gi|255322686|ref|ZP_05363830.1| flagellar hook-associated protein FlgK [Campylobacter showae
           RM3277]
 gi|255300247|gb|EET79520.1| flagellar hook-associated protein FlgK [Campylobacter showae
           RM3277]
          Length = 617

 Score = 39.9 bits (91), Expect = 0.29,   Method: Composition-based stats.
 Identities = 7/38 (18%), Positives = 14/38 (36%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           S  N   E+  +I     + +   +I   EK +   + 
Sbjct: 577 SGVNLNEELTNLIRFQSSYGAAAKIITTVEKMLDTLLT 614



 Score = 39.1 bits (89), Expect = 0.51,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 32/81 (39%), Gaps = 2/81 (2%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK--FSEVVGAIKNDIDQKISFVA 60
          +S +IG++   A + +++T   N++N D+  +   +V     E    +  DI        
Sbjct: 6  SSLHIGVSGLDAAQTQITTTGHNITNADSEHYTRQRVVQSAREPFHDMPGDIGTGTKVDT 65

Query: 61 SGKEYLSKEVGSFISTGTELD 81
            + +         ++   L+
Sbjct: 66 VVRVHDEFTFARLRTSNINLE 86


>gi|209521596|ref|ZP_03270294.1| flagellar hook-associated protein FlgK [Burkholderia sp. H160]
 gi|209497979|gb|EDZ98136.1| flagellar hook-associated protein FlgK [Burkholderia sp. H160]
          Length = 664

 Score = 39.9 bits (91), Expect = 0.29,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 27/68 (39%), Gaps = 1/68 (1%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
             NIGL+   A +  L+T  +N+SN  T G+      +SE VG            V++ 
Sbjct: 4  NLLNIGLSGLSAAQWGLTTTGENISNASTAGYTMETPVYSE-VGGTYTGSGYLPMGVSTD 62

Query: 63 KEYLSKEV 70
              +   
Sbjct: 63 TVTRAYSQ 70



 Score = 37.2 bits (84), Expect = 2.2,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 13/37 (35%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N   E   ++   Q + + + +I   +      +
Sbjct: 624 SGVNINEEAANLLQYQQLYQANSKVIQTAQTLFQTLL 660


>gi|167905095|ref|ZP_02492300.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           NCTC 13177]
          Length = 452

 Score = 39.9 bits (91), Expect = 0.29,   Method: Composition-based stats.
 Identities = 23/195 (11%), Positives = 50/195 (25%), Gaps = 1/195 (0%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
                IG++   A  Q L   + N +N  T G+    V  S  +    +     +    S
Sbjct: 1   MNIIYIGMSGIRAANQSLLAASQNTANIATGGYSRRGVLLSTGLTGGVDASG-LLRLNES 59

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
            K     +               +        +P       +        G+L +ASG  
Sbjct: 60  YKTQQLWQAAGQYGRYDAAQTYFDQLEALFGGNPVDGKTQANDLGFGKFIGALEAASGDP 119

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
               + +  I             +  ++ + + I    + +V+   G  +          
Sbjct: 120 GDSVLRNGVIDAANSMTKQFNNMRSVLTNQLRSIEQQRVTTVEQVNGLAKTVAELNGKIA 179

Query: 182 PPTPLEDLSGVTVKR 196
                       + +
Sbjct: 180 AGQASGADVSALMDQ 194


>gi|332284025|ref|YP_004415936.1| flagellar hook-associated protein FlgK [Pusillimonas sp. T7-7]
 gi|330427978|gb|AEC19312.1| flagellar hook-associated protein FlgK [Pusillimonas sp. T7-7]
          Length = 553

 Score = 39.9 bits (91), Expect = 0.30,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 17/38 (44%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39
              N+GL    A + RL T   N++N  T G+    V
Sbjct: 1  MNLANLGLTGLNAAQNRLQTAGHNINNAATEGYNRQSV 38


>gi|217959222|ref|YP_002337770.1| flagellar hook-associated protein FlgK [Bacillus cereus AH187]
 gi|217064765|gb|ACJ79015.1| putative flagellar hook-associated protein [Bacillus cereus
          AH187]
          Length = 432

 Score = 39.9 bits (91), Expect = 0.30,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 25/53 (47%)

Query: 6  NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
          N  L+  LA +  L T   N+SN  T G+    V +  V  +  +  +Q+I +
Sbjct: 7  NTPLSGMLAAQMGLQTTRQNLSNIHTPGYVRQMVNYGSVGASNGHTPEQRIGY 59



 Score = 38.3 bits (87), Expect = 0.91,   Method: Composition-based stats.
 Identities = 5/34 (14%), Positives = 11/34 (32%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
            N   EM  ++   + F + +  I    +     
Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427


>gi|134280799|ref|ZP_01767509.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           305]
 gi|125657224|gb|ABN48712.1| flagellar hook-associated protein [Burkholderia pseudomallei]
 gi|134247821|gb|EBA47905.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           305]
          Length = 452

 Score = 39.9 bits (91), Expect = 0.30,   Method: Composition-based stats.
 Identities = 23/195 (11%), Positives = 50/195 (25%), Gaps = 1/195 (0%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
                IG++   A  Q L   + N +N  T G+    V  S  +    +     +    S
Sbjct: 1   MNIIYIGMSGIRAANQSLLAASQNTANIATGGYSRRGVLLSTGLTGGVDASG-LLRLNES 59

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
            K     +               +        +P       +        G+L +ASG  
Sbjct: 60  YKTQQLWQAAGQYGRYDAAQTYFDQLEALFGGNPVDGKTQANDLGFGKFIGALEAASGDP 119

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
               + +  I             +  ++ + + I    + +V+   G  +          
Sbjct: 120 GDSVLRNGVIDAANSMTKQFNNMRSVLTNQLRSIEQQRVTTVEQVNGLAKTVAELNGKIA 179

Query: 182 PPTPLEDLSGVTVKR 196
                       + +
Sbjct: 180 AGQASGADVSALMDQ 194


>gi|42780831|ref|NP_978078.1| flagellar hook-associated protein FlgK [Bacillus cereus ATCC
          10987]
 gi|222095362|ref|YP_002529422.1| flagellar hook-associated protein flgk [Bacillus cereus Q1]
 gi|42736751|gb|AAS40686.1| flagellar hook-associated protein, putative [Bacillus cereus ATCC
          10987]
 gi|221239420|gb|ACM12130.1| flagellar hook-associated protein 1 [Bacillus cereus Q1]
          Length = 432

 Score = 39.9 bits (91), Expect = 0.30,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 25/53 (47%)

Query: 6  NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
          N  L+  LA +  L T   N+SN  T G+    V +  V  +  +  +Q+I +
Sbjct: 7  NTPLSGMLAAQMGLQTTRQNLSNIHTPGYVRQMVNYGSVGASNGHTPEQRIGY 59



 Score = 38.3 bits (87), Expect = 0.89,   Method: Composition-based stats.
 Identities = 5/34 (14%), Positives = 11/34 (32%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
            N   EM  ++   + F + +  I    +     
Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427


>gi|320530514|ref|ZP_08031572.1| flagellar hook-associated protein FlgK [Selenomonas artemidis
           F0399]
 gi|320137347|gb|EFW29271.1| flagellar hook-associated protein FlgK [Selenomonas artemidis
           F0399]
          Length = 582

 Score = 39.9 bits (91), Expect = 0.30,   Method: Composition-based stats.
 Identities = 10/137 (7%), Positives = 41/137 (29%), Gaps = 2/137 (1%)

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
            ++   S  +    +              K    + G     +   + ++T+ +      
Sbjct: 445 TISAGSSTYTYDNSWINGTGDGTMAVELSKLFNTDQGSSMNPAGTERPVSTISINQYYN- 503

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
            G + +  +           +D     + +     +  N   E+  M+     + + + +
Sbjct: 504 -GIMSKLGANAETVDKKLKQQDDLITQITQWRQSTAGVNWNEELTNMLKFQTGYGACSRV 562

Query: 227 IDENEKSMLEAIRNIAS 243
           +   ++ + + I +  +
Sbjct: 563 LTSMDEMLDKLINSTGT 579



 Score = 39.9 bits (91), Expect = 0.34,   Method: Composition-based stats.
 Identities = 8/49 (16%), Positives = 17/49 (34%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
            N  +      +  L T   N++N  T G+    V  +      ++ +
Sbjct: 7  GLNTMVKGIQNNQLSLDTTGHNITNASTPGYSRQSVNSAATNYQERSSL 55


>gi|241766917|ref|ZP_04764723.1| flagellar basal-body rod protein FlgB [Acidovorax delafieldii
          2AN]
 gi|241362621|gb|EER58469.1| flagellar basal-body rod protein FlgB [Acidovorax delafieldii
          2AN]
          Length = 147

 Score = 39.9 bits (91), Expect = 0.31,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 18/47 (38%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56
           A +   +R   +A N++N DT G+      F+E +           
Sbjct: 14 NALMLRAERQRAIASNIANADTPGYVARDFNFAETLREATGAGSATS 60


>gi|228920449|ref|ZP_04083794.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis
          serovar huazhongensis BGSC 4BD1]
 gi|228839079|gb|EEM84375.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis
          serovar huazhongensis BGSC 4BD1]
          Length = 432

 Score = 39.9 bits (91), Expect = 0.31,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 25/53 (47%)

Query: 6  NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
          N  L+  LA +  L T   N+SN  T G+    V +  V  +  +  +Q+I +
Sbjct: 7  NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSVGASNGHTPEQRIGY 59



 Score = 37.9 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 5/34 (14%), Positives = 11/34 (32%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
            N   EM  ++   + F + +  I    +     
Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427


>gi|229058370|ref|ZP_04196754.1| Flagellar hook-associated protein FlgK [Bacillus cereus AH603]
 gi|228719879|gb|EEL71469.1| Flagellar hook-associated protein FlgK [Bacillus cereus AH603]
          Length = 432

 Score = 39.9 bits (91), Expect = 0.31,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 25/53 (47%)

Query: 6  NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
          N  L+  LA +  L T   N+SN  T G+    V +  V  +  +  +Q+I +
Sbjct: 7  NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSVGASNGHTPEQRIGY 59



 Score = 37.9 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 5/34 (14%), Positives = 11/34 (32%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
            N   EM  ++   + F + +  I    +     
Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427


>gi|210135277|ref|YP_002301716.1| flagellar hook-associated protein FlgK [Helicobacter pylori P12]
 gi|210133245|gb|ACJ08236.1| flagellar hook-associated protein 1 [Helicobacter pylori P12]
          Length = 606

 Score = 39.9 bits (91), Expect = 0.31,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 14/37 (37%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  +   EM  +I     + +   +I   ++ +   +
Sbjct: 566 SQVSVDEEMLNLIKFQSGYAANAKVITAIDRMIDTLL 602



 Score = 38.7 bits (88), Expect = 0.67,   Method: Composition-based stats.
 Identities = 6/29 (20%), Positives = 11/29 (37%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTD 30
           +S N       A +  +    +N+SN  
Sbjct: 5  LSSLNTSYTGLQAHQSMVDVTGNNISNAS 33


>gi|126445158|ref|YP_001061252.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           668]
 gi|126224649|gb|ABN88154.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           668]
          Length = 452

 Score = 39.9 bits (91), Expect = 0.31,   Method: Composition-based stats.
 Identities = 23/195 (11%), Positives = 50/195 (25%), Gaps = 1/195 (0%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
                IG++   A  Q L   + N +N  T G+    V  S  +    +     +    S
Sbjct: 1   MNIIYIGMSGIRAANQSLLAASQNTANIATGGYSRRGVLLSTGLTGGVDASG-LLRLNES 59

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
            K     +               +        +P       +        G+L +ASG  
Sbjct: 60  YKTQQLWQAAGQYGRYDAAQTYFDQLEALFGGNPVDGKTQANDLGFGKFIGALEAASGDP 119

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
               + +  I             +  ++ + + I    + +V+   G  +          
Sbjct: 120 GDSVLRNGVIDAANSMTKQFNNMRSVLTNQLRSIEQQRVTTVEQVNGLAKTVAELNGKIA 179

Query: 182 PPTPLEDLSGVTVKR 196
                       + +
Sbjct: 180 AGQASGADVSALMDQ 194


>gi|238782789|ref|ZP_04626818.1| Flagellar basal-body rod protein flgB [Yersinia bercovieri ATCC
          43970]
 gi|238716212|gb|EEQ08195.1| Flagellar basal-body rod protein flgB [Yersinia bercovieri ATCC
          43970]
          Length = 135

 Score = 39.9 bits (91), Expect = 0.31,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 21/45 (46%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK 55
          A   L QR   +A N++N DT G+    + FS+ +    +    +
Sbjct: 15 ALRLLTQRQDILASNIANVDTPGYLARDIDFSQQLKTAVDRSAPE 59


>gi|313896955|ref|ZP_07830502.1| flagellar hook-associated protein FlgK [Selenomonas sp. oral taxon
           137 str. F0430]
 gi|312974402|gb|EFR39870.1| flagellar hook-associated protein FlgK [Selenomonas sp. oral taxon
           137 str. F0430]
          Length = 582

 Score = 39.9 bits (91), Expect = 0.31,   Method: Composition-based stats.
 Identities = 10/137 (7%), Positives = 41/137 (29%), Gaps = 2/137 (1%)

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
            ++   S  +    +              K    + G     +   + ++T+ +      
Sbjct: 445 TISAGSSTYTYDNSWINGTGDGTMAVELSKLFNTDQGSSMNPAGTERPVSTISINQYYN- 503

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
            G + +  +           +D     + +     +  N   E+  M+     + + + +
Sbjct: 504 -GIMSKLGANAETVDKKLKQQDDLITQITQWRQSTAGVNWNEELTNMLKFQTGYGACSRV 562

Query: 227 IDENEKSMLEAIRNIAS 243
           +   ++ + + I +  +
Sbjct: 563 LTSMDEMLDKLINSTGT 579



 Score = 39.9 bits (91), Expect = 0.35,   Method: Composition-based stats.
 Identities = 8/49 (16%), Positives = 17/49 (34%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
            N  +      +  L T   N++N  T G+    V  +      ++ +
Sbjct: 7  GLNTMVKGIQNNQLSLDTTGHNITNASTPGYSRQSVNSAATNYQERSSL 55


>gi|229166579|ref|ZP_04294331.1| Flagellar hook-associated protein FlgK [Bacillus cereus AH621]
 gi|228616833|gb|EEK73906.1| Flagellar hook-associated protein FlgK [Bacillus cereus AH621]
          Length = 432

 Score = 39.9 bits (91), Expect = 0.31,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 25/53 (47%)

Query: 6  NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
          N  L+  LA +  L T   N+SN  T G+    V +  V  +  +  +Q+I +
Sbjct: 7  NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSVGASNGHTPEQRIGY 59



 Score = 37.9 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 5/34 (14%), Positives = 11/34 (32%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
            N   EM  ++   + F + +  I    +     
Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427


>gi|163939544|ref|YP_001644428.1| flagellar hook-associated protein FlgK [Bacillus
          weihenstephanensis KBAB4]
 gi|163861741|gb|ABY42800.1| flagellar hook-associated protein FlgK [Bacillus
          weihenstephanensis KBAB4]
          Length = 432

 Score = 39.9 bits (91), Expect = 0.31,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 25/53 (47%)

Query: 6  NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
          N  L+  LA +  L T   N+SN  T G+    V +  V  +  +  +Q+I +
Sbjct: 7  NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSVGASNGHTPEQRIGY 59



 Score = 37.9 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 5/34 (14%), Positives = 11/34 (32%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
            N   EM  ++   + F + +  I    +     
Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427


>gi|229096224|ref|ZP_04227197.1| Flagellar hook-associated protein FlgK [Bacillus cereus Rock3-29]
 gi|229102337|ref|ZP_04233045.1| Flagellar hook-associated protein FlgK [Bacillus cereus Rock3-28]
 gi|229115179|ref|ZP_04244589.1| Flagellar hook-associated protein FlgK [Bacillus cereus Rock1-3]
 gi|228668319|gb|EEL23751.1| Flagellar hook-associated protein FlgK [Bacillus cereus Rock1-3]
 gi|228680984|gb|EEL35153.1| Flagellar hook-associated protein FlgK [Bacillus cereus Rock3-28]
 gi|228687184|gb|EEL41089.1| Flagellar hook-associated protein FlgK [Bacillus cereus Rock3-29]
          Length = 432

 Score = 39.9 bits (91), Expect = 0.32,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 25/53 (47%)

Query: 6  NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
          N  L+  LA +  L T   N+SN  T G+    V +  V  +  +  +Q+I +
Sbjct: 7  NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSVGASNGHTPEQRIGY 59



 Score = 37.9 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 5/34 (14%), Positives = 11/34 (32%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
            N   EM  ++   + F + +  I    +     
Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427


>gi|323495380|ref|ZP_08100457.1| flagellar basal body rod protein FlgB [Vibrio brasiliensis LMG
          20546]
 gi|323310303|gb|EGA63490.1| flagellar basal body rod protein FlgB [Vibrio brasiliensis LMG
          20546]
          Length = 131

 Score = 39.9 bits (91), Expect = 0.32,   Method: Composition-based stats.
 Identities = 6/38 (15%), Positives = 20/38 (52%)

Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
          E+    ++ N++  +T G+++  + F + + A  ++  
Sbjct: 20 ERNAEVISTNIAQANTPGYKSKGMDFQKALQAATSEAS 57


>gi|258622486|ref|ZP_05717508.1| Flagellar basal-body rod protein C [Vibrio mimicus VM573]
 gi|262173352|ref|ZP_06041029.1| flagellar basal-body rod protein FlgC [Vibrio mimicus MB-451]
 gi|258585186|gb|EEW09913.1| Flagellar basal-body rod protein C [Vibrio mimicus VM573]
 gi|261890710|gb|EEY36697.1| flagellar basal-body rod protein FlgC [Vibrio mimicus MB-451]
          Length = 144

 Score = 39.9 bits (91), Expect = 0.32,   Method: Composition-based stats.
 Identities = 6/42 (14%), Positives = 18/42 (42%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   + + + EM  M+  T+ F +   ++   +      +
Sbjct: 97  GYVYYPDIDVVAEMADMMSATRSFETNVEVLSNVKSMQQGLL 138



 Score = 36.8 bits (83), Expect = 2.8,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 34/99 (34%), Gaps = 6/99 (6%)

Query: 7   IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           I  +A  A   RL+TVA N++N D V       ++ +K  F+ V    +          A
Sbjct: 9   IAGSAMTAQTVRLNTVASNLANADAVSANSDDAYKALKPVFATVYNKTQMAASDSAYPSA 68

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
             +     +         E +  L  D  +       ++
Sbjct: 69  EVRVMDVVQNAGQAEKRFEPNNPLANDEGYVYYPDIDVV 107


>gi|30019783|ref|NP_831414.1| flagellar hook-associated protein FlgK [Bacillus cereus ATCC 14579]
 gi|229127064|ref|ZP_04256063.1| Flagellar hook-associated protein FlgK [Bacillus cereus BDRD-Cer4]
 gi|29895328|gb|AAP08615.1| Flagellar hook-associated protein 1 [Bacillus cereus ATCC 14579]
 gi|228656417|gb|EEL12256.1| Flagellar hook-associated protein FlgK [Bacillus cereus BDRD-Cer4]
          Length = 432

 Score = 39.9 bits (91), Expect = 0.32,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 32/101 (31%), Gaps = 6/101 (5%)

Query: 6   NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65
           N  L+  LA +  L T   N+SN  T G+    V +    G  K    ++          
Sbjct: 7   NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYESA-GGSKGYAPEQRIGYGVQTLG 65

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106
           + +      +         +  + F+  +     L+R    
Sbjct: 66  VDRITDEVKTKQYN-----DQMSQFSYYAYMNSTLSRVESM 101



 Score = 37.9 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 5/34 (14%), Positives = 11/34 (32%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
            N   EM  ++   + F + +  I    +     
Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427


>gi|85710170|ref|ZP_01041235.1| flagellar hook-associated protein 1 [Erythrobacter sp. NAP1]
 gi|85688880|gb|EAQ28884.1| flagellar hook-associated protein 1 [Erythrobacter sp. NAP1]
          Length = 452

 Score = 39.9 bits (91), Expect = 0.32,   Method: Composition-based stats.
 Identities = 6/35 (17%), Positives = 13/35 (37%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            +   E   +I L Q F + + +I    +     +
Sbjct: 415 VDLDAEAASLIRLQQAFEANSRVIQVASELFDTIL 449


>gi|229132551|ref|ZP_04261400.1| Flagellar hook-associated protein FlgK [Bacillus cereus
          BDRD-ST196]
 gi|228650897|gb|EEL06883.1| Flagellar hook-associated protein FlgK [Bacillus cereus
          BDRD-ST196]
          Length = 432

 Score = 39.9 bits (91), Expect = 0.33,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 25/53 (47%)

Query: 6  NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
          N  L+  LA +  L T   N+SN  T G+    V +  V  +  +  +Q+I +
Sbjct: 7  NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSVGASNGHTPEQRIGY 59



 Score = 37.9 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 5/34 (14%), Positives = 11/34 (32%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
            N   EM  ++   + F + +  I    +     
Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427


>gi|254477691|ref|ZP_05091077.1| flagellar basal-body rod protein; FlgB [Ruegeria sp. R11]
 gi|214031934|gb|EEB72769.1| flagellar basal-body rod protein; FlgB [Ruegeria sp. R11]
          Length = 129

 Score = 39.9 bits (91), Expect = 0.33,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 22/53 (41%), Gaps = 1/53 (1%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIKNDID 53
             F I  +      +R + VA N++N DT G+    +K F EV        D
Sbjct: 5  LNVFKIAYSMATHAGKRQALVAQNIANADTPGYNAKDIKPFKEVYEQRARPGD 57


>gi|217976222|ref|YP_002360369.1| flagellar basal body rod protein FlgB [Methylocella silvestris
          BL2]
 gi|217501598|gb|ACK49007.1| flagellar basal body rod protein FlgB [Methylocella silvestris
          BL2]
          Length = 126

 Score = 39.9 bits (91), Expect = 0.33,   Method: Composition-based stats.
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 3/40 (7%)

Query: 9  LAAQLA--LEQRLSTVADNMSNTDTVGFRTIKVK-FSEVV 45
          L++Q A  L  R S +A N++N +T GF    V  F +V 
Sbjct: 9  LSSQQARWLTVRQSVIAANVANANTPGFTASDVTPFEDVF 48


>gi|218896670|ref|YP_002445081.1| flagellar hook-associated protein FlgK [Bacillus cereus G9842]
 gi|228900319|ref|ZP_04064549.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis
          IBL 4222]
 gi|218546008|gb|ACK98402.1| flagellar hook-associated protein FlgK [Bacillus cereus G9842]
 gi|228859354|gb|EEN03784.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis
          IBL 4222]
          Length = 432

 Score = 39.9 bits (91), Expect = 0.33,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 25/53 (47%)

Query: 6  NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
          N  L+  LA +  L T   N+SN  T G+    V +  V  +  +  +Q+I +
Sbjct: 7  NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSVGASNGHTPEQRIGY 59



 Score = 37.9 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 5/34 (14%), Positives = 11/34 (32%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
            N   EM  ++   + F + +  I    +     
Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427


>gi|149191150|ref|ZP_01869408.1| flagellar basal body rod protein [Vibrio shilonii AK1]
 gi|148834988|gb|EDL51967.1| flagellar basal body rod protein [Vibrio shilonii AK1]
          Length = 115

 Score = 39.9 bits (91), Expect = 0.33,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 3/51 (5%)

Query: 16 EQRLS---TVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
          + RL     ++ N++N DT  ++ + +KF  V+  I N  D  I   A  +
Sbjct: 16 QFRLDRAAVLSSNIANVDTPNYKAMDLKFDAVLSGIGNSKDWYIDTSAQYR 66


>gi|228907371|ref|ZP_04071229.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis
          IBL 200]
 gi|228852232|gb|EEM97028.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis
          IBL 200]
          Length = 432

 Score = 39.9 bits (91), Expect = 0.33,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 25/53 (47%)

Query: 6  NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
          N  L+  LA +  L T   N+SN  T G+    V +  V  +  +  +Q+I +
Sbjct: 7  NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSVGASNGHTPEQRIGY 59



 Score = 37.9 bits (86), Expect = 1.2,   Method: Composition-based stats.
 Identities = 5/34 (14%), Positives = 11/34 (32%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
            N   EM  ++   + F + +  I    +     
Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427


>gi|229144350|ref|ZP_04272756.1| Flagellar hook-associated protein FlgK [Bacillus cereus BDRD-ST24]
 gi|296502338|ref|YP_003664038.1| flagellar hook-associated protein FlgK [Bacillus thuringiensis
           BMB171]
 gi|228639137|gb|EEK95561.1| Flagellar hook-associated protein FlgK [Bacillus cereus BDRD-ST24]
 gi|296323390|gb|ADH06318.1| flagellar hook-associated protein FlgK [Bacillus thuringiensis
           BMB171]
          Length = 432

 Score = 39.9 bits (91), Expect = 0.33,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 32/101 (31%), Gaps = 6/101 (5%)

Query: 6   NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65
           N  L+  LA +  L T   N+SN  T G+    V +    G  K    ++          
Sbjct: 7   NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYESA-GGSKGYAPEQRIGYGVQTLG 65

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106
           + +      +         +  + F+  +     L+R    
Sbjct: 66  VDRITDEVKTKQYN-----DQMSQFSYYAYMNSTLSRVESM 101



 Score = 37.9 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 5/34 (14%), Positives = 11/34 (32%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
            N   EM  ++   + F + +  I    +     
Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427


>gi|208435439|ref|YP_002267105.1| flagellar basal-body rod protein [Helicobacter pylori G27]
 gi|208433368|gb|ACI28239.1| flagellar basal-body rod protein [Helicobacter pylori G27]
          Length = 140

 Score = 39.9 bits (91), Expect = 0.33,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 18/37 (48%)

Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
            R   +A N++N DT  +R   + F  V+   K +I
Sbjct: 18 SLRQDMIASNIANVDTPFYRPKDLDFESVLAEKKAEI 54


>gi|254251188|ref|ZP_04944506.1| Flagellar basal body protein [Burkholderia dolosa AUO158]
 gi|124893797|gb|EAY67677.1| Flagellar basal body protein [Burkholderia dolosa AUO158]
          Length = 173

 Score = 39.9 bits (91), Expect = 0.33,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 18/43 (41%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
          A      R   ++ N++N DT G+R   V F+  +       +
Sbjct: 25 ALDVRAYRQELLSSNIANADTPGYRARDVDFASTLARSLKQAN 67


>gi|108563933|ref|YP_628249.1| flagellar basal body rod protein FlgB [Helicobacter pylori HPAG1]
 gi|107837706|gb|ABF85575.1| flagellar basal-body rod protein [Helicobacter pylori HPAG1]
          Length = 140

 Score = 39.9 bits (91), Expect = 0.33,   Method: Composition-based stats.
 Identities = 9/29 (31%), Positives = 15/29 (51%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVG 46
          R   +A N++N DT  +R   + F  V+ 
Sbjct: 20 RQDMIASNIANVDTPFYRPKDLDFESVLA 48


>gi|255601427|ref|XP_002537672.1| Flagellar hook-associated protein, putative [Ricinus communis]
 gi|223515502|gb|EEF24710.1| Flagellar hook-associated protein, putative [Ricinus communis]
          Length = 274

 Score = 39.9 bits (91), Expect = 0.33,   Method: Composition-based stats.
 Identities = 10/73 (13%), Positives = 24/73 (32%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           +  N  L+  +A +  LS  + N++N  T G+       + +  +           V +
Sbjct: 1  MSILNNALSGAIASQLALSASSQNIANLQTKGYTRQGALLTALAPSTGAKEAGNGVSVTA 60

Query: 62 GKEYLSKEVGSFI 74
             +        +
Sbjct: 61 LMRFSDSYKTQQM 73


>gi|163856441|ref|YP_001630739.1| flagellar hook-associated protein FlgK [Bordetella petrii DSM
          12804]
 gi|163260169|emb|CAP42471.1| flagellar hook-associated protein 1 [Bordetella petrii]
          Length = 549

 Score = 39.9 bits (91), Expect = 0.33,   Method: Composition-based stats.
 Identities = 9/68 (13%), Positives = 22/68 (32%), Gaps = 1/68 (1%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
             +N+ L    A +  +   + N++N    G+   ++  +   GA +         V  
Sbjct: 1  MNLYNLALTGLNASQAGMEVTSHNINNAANAGYSRQRLV-TSTAGATETGQGFFGRGVQV 59

Query: 62 GKEYLSKE 69
                 +
Sbjct: 60 DTVKRQYD 67


>gi|149188063|ref|ZP_01866358.1| flagellar basal-body rod protein B [Vibrio shilonii AK1]
 gi|148838051|gb|EDL54993.1| flagellar basal-body rod protein B [Vibrio shilonii AK1]
          Length = 131

 Score = 39.9 bits (91), Expect = 0.33,   Method: Composition-based stats.
 Identities = 6/38 (15%), Positives = 18/38 (47%)

Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
          E+    ++ N++  +T G++   ++F   + A  +   
Sbjct: 20 EKNAEVISTNIAQANTPGYKAKGMEFDRALKAASSGAS 57


>gi|90422393|ref|YP_530763.1| flagellar hook-associated protein [Rhodopseudomonas palustris
          BisB18]
 gi|90104407|gb|ABD86444.1| Flagellar hook-associated protein [Rhodopseudomonas palustris
          BisB18]
          Length = 588

 Score = 39.9 bits (91), Expect = 0.33,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 22/47 (46%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
          I +++ +  + ++S  + N+SN DT G+       + VV A      
Sbjct: 9  IAVSSLMNTQVQISVTSSNISNADTTGYTVKTANQAAVVNAGTGAGT 55


>gi|258625236|ref|ZP_05720148.1| Flagellar basal-body rod protein C [Vibrio mimicus VM603]
 gi|258582483|gb|EEW07320.1| Flagellar basal-body rod protein C [Vibrio mimicus VM603]
          Length = 144

 Score = 39.9 bits (91), Expect = 0.34,   Method: Composition-based stats.
 Identities = 6/42 (14%), Positives = 18/42 (42%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   + + + EM  M+  T+ F +   ++   +      +
Sbjct: 97  GYVYYPDIDVVAEMADMMSATRSFETNVEMLSNVKSMQQGLL 138



 Score = 36.4 bits (82), Expect = 3.9,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 34/99 (34%), Gaps = 6/99 (6%)

Query: 7   IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKISFVA 60
           I  +A  A   RL+TVA N++N D V       ++ +K  F+ V    +          A
Sbjct: 9   IAGSAMTAQTVRLNTVASNLANADAVSANSDDAYKALKPVFATVYNKTQMAASDSAYPSA 68

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
             +     +         E +  L  D  +       ++
Sbjct: 69  EVRVMDVVQNAGQAEKRFEPNNPLANDEGYVYYPDIDVV 107


>gi|206970814|ref|ZP_03231766.1| putative flagellar hook-associated protein [Bacillus cereus
          AH1134]
 gi|206734450|gb|EDZ51620.1| putative flagellar hook-associated protein [Bacillus cereus
          AH1134]
          Length = 432

 Score = 39.9 bits (91), Expect = 0.34,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 25/53 (47%)

Query: 6  NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
          N  L+  LA +  L T   N+SN  T G+    V +  V  +  +  +Q+I +
Sbjct: 7  NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSVGASNGHTPEQRIGY 59



 Score = 37.9 bits (86), Expect = 1.2,   Method: Composition-based stats.
 Identities = 5/34 (14%), Positives = 11/34 (32%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
            N   EM  ++   + F + +  I    +     
Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427


>gi|220927553|ref|YP_002504462.1| flagellar hook-associated protein FlgK [Clostridium
          cellulolyticum H10]
 gi|219997881|gb|ACL74482.1| flagellar hook-associated protein FlgK [Clostridium
          cellulolyticum H10]
          Length = 708

 Score = 39.9 bits (91), Expect = 0.34,   Method: Composition-based stats.
 Identities = 12/75 (16%), Positives = 22/75 (29%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
          +S+ I  +     E+ L     N+SN  T GF   +          +   + K+     G
Sbjct: 6  SSYEIARSGLKVSERGLFVTGHNLSNVHTPGFTRQQAIIETNPYITQYGKNGKLFQYGLG 65

Query: 63 KEYLSKEVGSFISTG 77
           +             
Sbjct: 66 ADIQETRQIRHTFLD 80



 Score = 39.5 bits (90), Expect = 0.39,   Method: Composition-based stats.
 Identities = 6/41 (14%), Positives = 18/41 (43%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  +   EM  M+     +++ + +++  +  M   I ++ 
Sbjct: 664 SGVSMDEEMSNMMKYKFAYDASSRVLNIMDSMMETIITSLG 704


>gi|238796901|ref|ZP_04640405.1| Flagellar basal-body rod protein flgB [Yersinia mollaretii ATCC
          43969]
 gi|238719161|gb|EEQ10973.1| Flagellar basal-body rod protein flgB [Yersinia mollaretii ATCC
          43969]
          Length = 137

 Score = 39.9 bits (91), Expect = 0.34,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 20/45 (44%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK 55
          A   L QR   +A N++N DT G+    + FS+ +    +     
Sbjct: 15 ALSLLTQRQDILASNIANVDTPGYLARDMDFSQQLKNAVDRSAPD 59


>gi|319944138|ref|ZP_08018416.1| flagellar basal-body rod protein FlgB [Lautropia mirabilis ATCC
          51599]
 gi|319742632|gb|EFV95041.1| flagellar basal-body rod protein FlgB [Lautropia mirabilis ATCC
          51599]
          Length = 154

 Score = 39.9 bits (91), Expect = 0.34,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 15/40 (37%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50
          A      R  T+A N++N DT  F+     F   +     
Sbjct: 17 ALQLRASRQETIASNIANADTPNFKAKDFDFGAALREASG 56


>gi|317010251|gb|ADU80831.1| flagellar basal body rod protein FlgB [Helicobacter pylori
          India7]
          Length = 140

 Score = 39.9 bits (91), Expect = 0.34,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 18/35 (51%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          R   +A N++N DT  +R   + F  V+   K +I
Sbjct: 20 RQDMIASNIANVDTPFYRPRDLDFESVLAEKKAEI 54


>gi|228938852|ref|ZP_04101452.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis
          serovar berliner ATCC 10792]
 gi|228971733|ref|ZP_04132354.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis
          serovar thuringiensis str. T01001]
 gi|228978342|ref|ZP_04138719.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis
          Bt407]
 gi|228781359|gb|EEM29560.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis
          Bt407]
 gi|228787823|gb|EEM35781.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis
          serovar thuringiensis str. T01001]
 gi|228820701|gb|EEM66726.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis
          serovar berliner ATCC 10792]
 gi|326939352|gb|AEA15248.1| flagellar hook-associated protein FlgK [Bacillus thuringiensis
          serovar chinensis CT-43]
          Length = 432

 Score = 39.9 bits (91), Expect = 0.34,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 25/53 (47%)

Query: 6  NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
          N  L+  LA +  L T   N+SN  T G+    V +  V  +  +  +Q+I +
Sbjct: 7  NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSVGASNGHTPEQRIGY 59



 Score = 37.9 bits (86), Expect = 1.2,   Method: Composition-based stats.
 Identities = 5/34 (14%), Positives = 11/34 (32%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
            N   EM  ++   + F + +  I    +     
Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427


>gi|152965614|ref|YP_001361398.1| hypothetical protein Krad_1648 [Kineococcus radiotolerans SRS30216]
 gi|151360131|gb|ABS03134.1| protein of unknown function DUF1078 domain protein [Kineococcus
           radiotolerans SRS30216]
          Length = 131

 Score = 39.9 bits (91), Expect = 0.34,   Method: Composition-based stats.
 Identities = 4/43 (9%), Positives = 20/43 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G+++  + +   +M  ++   + + +    I   +++   A++
Sbjct: 85  GYVKYPDIDMSSQMTSLMMAQRAYQANLQTITSAKEAYSAALQ 127



 Score = 37.2 bits (84), Expect = 2.0,   Method: Composition-based stats.
 Identities = 11/103 (10%), Positives = 27/103 (26%), Gaps = 6/103 (5%)

Query: 4   SFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKIS 57
           +  I         + +  V+DN++N +T        F    V  +E        +   ++
Sbjct: 6   AIGIAGTGVTVNRKWMDAVSDNLANINTATRTDEDAFAARYVVAAEAADGKGTQVAGIVT 65

Query: 58  FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL 100
               G+     +       G      ++  +            
Sbjct: 66  GSTEGRMVHEPDNPLADENGYVKYPDIDMSSQMTSLMMAQRAY 108


>gi|327478806|gb|AEA82116.1| flagellar basal-body rod protein FlgB [Pseudomonas stutzeri DSM
           4166]
          Length = 104

 Score = 39.9 bits (91), Expect = 0.35,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 33/86 (38%)

Query: 16  EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIS 75
            QR   +A N++N DT GF+   + F   +  + +    ++S   S    L +       
Sbjct: 3   MQRSEILAANLANEDTPGFQARDIDFGAEMQRLDDGASSRLSIAGSDPRMLYRVPTQASQ 62

Query: 76  TGTELDFALEGDAWFALESPRGIILT 101
            G  ++ ++E   +          LT
Sbjct: 63  DGNTVELSVEQAQFSRNSMDFQTSLT 88


>gi|182680551|ref|YP_001834697.1| flagellar basal body rod protein FlgB [Beijerinckia indica subsp.
          indica ATCC 9039]
 gi|182636434|gb|ACB97208.1| flagellar basal body rod protein FlgB [Beijerinckia indica subsp.
          indica ATCC 9039]
          Length = 126

 Score = 39.9 bits (91), Expect = 0.35,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 23/64 (35%), Gaps = 1/64 (1%)

Query: 18 RLSTVADNMSNTDTVGFRT-IKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76
          R +T+A N++  +T GF++   + F +V       +        +     +         
Sbjct: 20 RQATIAQNIAQANTPGFKSVDLLPFEQVYSESGLRMTATSPKHLAADPNEADLTAGHTEA 79

Query: 77 GTEL 80
          G E 
Sbjct: 80 GWET 83


>gi|207108518|ref|ZP_03242680.1| flagellar hook-associated protein FlgK [Helicobacter pylori
          HPKX_438_CA4C1]
          Length = 267

 Score = 39.9 bits (91), Expect = 0.35,   Method: Composition-based stats.
 Identities = 6/29 (20%), Positives = 11/29 (37%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTD 30
           +S N       A +  +    +N+SN  
Sbjct: 5  LSSLNTSYTGLQAHQSMVDVTGNNISNAS 33


>gi|163735544|ref|ZP_02142976.1| flagellar hook-associated protein K [Roseobacter litoralis Och
          149]
 gi|161391164|gb|EDQ15501.1| flagellar hook-associated protein K [Roseobacter litoralis Och
          149]
          Length = 481

 Score = 39.9 bits (91), Expect = 0.35,   Method: Composition-based stats.
 Identities = 5/31 (16%), Positives = 14/31 (45%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGF 34
          + +  +    A  +    ++ N++N  T G+
Sbjct: 6  ALSNAMTGLRAAGRTSEVISANLANAMTPGY 36



 Score = 39.1 bits (89), Expect = 0.59,   Method: Composition-based stats.
 Identities = 6/36 (16%), Positives = 19/36 (52%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +S  E+ +++ + Q + +   +I+  ++ M   +R
Sbjct: 445 VDSDQELQRLLIVEQAYAANVRMIEAADEMMQTILR 480


>gi|228964720|ref|ZP_04125827.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis
          serovar sotto str. T04001]
 gi|228794970|gb|EEM42469.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis
          serovar sotto str. T04001]
          Length = 287

 Score = 39.9 bits (91), Expect = 0.35,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 25/53 (47%)

Query: 6  NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
          N  L+  LA +  L T   N+SN  T G+    V +  V  +  +  +Q+I +
Sbjct: 7  NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSVGASNGHTPEQRIGY 59


>gi|148980305|ref|ZP_01815992.1| flagellar basal-body rod protein B [Vibrionales bacterium SWAT-3]
 gi|145961324|gb|EDK26634.1| flagellar basal-body rod protein B [Vibrionales bacterium SWAT-3]
          Length = 115

 Score = 39.9 bits (91), Expect = 0.35,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 25/51 (49%), Gaps = 3/51 (5%)

Query: 16 EQRLS---TVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
          + RL     ++ N++N DT  ++ + ++F  V+  I +  D  I   A  +
Sbjct: 16 QFRLDRAAVLSSNIANVDTPNYKAMDLRFEAVLSGIGHSKDWYIGTAAQYR 66


>gi|83716869|ref|YP_438395.1| flagellar hook-associated protein FlgK [Burkholderia thailandensis
           E264]
 gi|167614843|ref|ZP_02383478.1| flagellar hook-associated protein FlgK [Burkholderia thailandensis
           Bt4]
 gi|257141428|ref|ZP_05589690.1| flagellar hook-associated protein FlgK [Burkholderia thailandensis
           E264]
 gi|83650694|gb|ABC34758.1| flagellar hook-associated protein 1, putative [Burkholderia
           thailandensis E264]
          Length = 452

 Score = 39.9 bits (91), Expect = 0.35,   Method: Composition-based stats.
 Identities = 23/195 (11%), Positives = 50/195 (25%), Gaps = 1/195 (0%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
                IG++   A  Q L   + N +N  T G+    V  S  +    +     +    S
Sbjct: 1   MNIIYIGMSGIRAANQSLLAASQNTANIATGGYSRRGVLLSTGLTGGVDASG-LLRLNES 59

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
            K     +               +        +P       +        G+L +ASG  
Sbjct: 60  YKTQQLWQTAGQYGRYDAAQTYFDQLEALFGGNPVDGKTKANDLGFGKFIGALEAASGNP 119

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
               + +  I             +  ++ + + I    + +V+   G  +          
Sbjct: 120 GDSVLRNGVIDAANSMTKQFNNMRSVLTNQLRSIEQQRVTTVEQVNGLAKTVAELNGKIA 179

Query: 182 PPTPLEDLSGVTVKR 196
                       + +
Sbjct: 180 AGQASGADVSALMDQ 194


>gi|15646166|ref|NP_208350.1| flagellar basal body rod protein FlgB [Helicobacter pylori 26695]
 gi|217031712|ref|ZP_03437216.1| hypothetical protein HPB128_155g25 [Helicobacter pylori B128]
 gi|298737152|ref|YP_003729682.1| flagellar basal-body rod protein FlgB [Helicobacter pylori B8]
 gi|2314742|gb|AAD08599.1| flagellar basal-body rod protein (flgB) [Helicobacter pylori
          26695]
 gi|216946559|gb|EEC25159.1| hypothetical protein HPB128_155g25 [Helicobacter pylori B128]
 gi|298356346|emb|CBI67218.1| flagellar basal-body rod protein FlgB [Helicobacter pylori B8]
          Length = 140

 Score = 39.9 bits (91), Expect = 0.35,   Method: Composition-based stats.
 Identities = 9/31 (29%), Positives = 15/31 (48%)

Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46
            R   +A N++N DT  +R   + F  V+ 
Sbjct: 18 SLRQDMIASNIANVDTPFYRPKDLDFESVLA 48


>gi|299131803|ref|ZP_07024998.1| flagellar hook-associated protein FlgK [Afipia sp. 1NLS2]
 gi|298591940|gb|EFI52140.1| flagellar hook-associated protein FlgK [Afipia sp. 1NLS2]
          Length = 610

 Score = 39.9 bits (91), Expect = 0.36,   Method: Composition-based stats.
 Identities = 10/122 (8%), Positives = 32/122 (26%)

Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179
                   +            +       +  G          +   Q F   +    S 
Sbjct: 489 GSGTQSGDTTRSDFILSQLTNSSYYVSPQTGIGSNATPFKGTMLSFLQQFTTMQGQAASS 548

Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
                  +++   T++      S  N   EM  ++ L   +++   ++   +      ++
Sbjct: 549 AQQLADGQNVVLSTLQNKLNSSSGVNIDDEMAHLLALQNAYSANARVMSTVKDMFDSLLQ 608

Query: 240 NI 241
           ++
Sbjct: 609 SV 610



 Score = 36.8 bits (83), Expect = 2.6,   Method: Composition-based stats.
 Identities = 9/32 (28%), Positives = 17/32 (53%)

Query: 9  LAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
          ++   A +  LS V+ N++N +T G+    V 
Sbjct: 1  MSGLRANQAALSLVSSNVANIETPGYVRKTVN 32


>gi|292487936|ref|YP_003530811.1| flagellar basal-body rod protein FlgB [Erwinia amylovora
          CFBP1430]
 gi|292899155|ref|YP_003538524.1| flagellar basal-body rod protein FlgB [Erwinia amylovora ATCC
          49946]
 gi|291199003|emb|CBJ46114.1| flagellar basal-body rod protein FlgB [Erwinia amylovora ATCC
          49946]
 gi|291553358|emb|CBA20403.1| Flagellar basal-body rod protein flgB [Erwinia amylovora
          CFBP1430]
 gi|312172057|emb|CBX80314.1| Flagellar basal-body rod protein flgB [Erwinia amylovora ATCC
          BAA-2158]
          Length = 137

 Score = 39.9 bits (91), Expect = 0.36,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 22/64 (34%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   +A N++N DT G++   + F+  +         + S ++          
Sbjct: 15 ALNLRAQRQEILASNIANADTPGYQARDIDFASQLTKAVEHGRAQGSAMSLAVTSARHIP 74

Query: 71 GSFI 74
              
Sbjct: 75 AETQ 78


>gi|241761145|ref|ZP_04759234.1| flagellar hook-associated protein FlgK [Zymomonas mobilis subsp.
          mobilis ATCC 10988]
 gi|241374764|gb|EER64225.1| flagellar hook-associated protein FlgK [Zymomonas mobilis subsp.
          mobilis ATCC 10988]
          Length = 458

 Score = 39.9 bits (91), Expect = 0.36,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 17/40 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
          M     IG +  L   + +  + +N+SN  T G+    V 
Sbjct: 1  MSDILQIGASGVLNYGKAIDVIGENVSNASTTGYARRDVS 40


>gi|56551501|ref|YP_162340.1| flagellar hook-associated protein FlgK [Zymomonas mobilis subsp.
          mobilis ZM4]
 gi|56543075|gb|AAV89229.1| flagellar hook-associated protein FlgK [Zymomonas mobilis subsp.
          mobilis ZM4]
          Length = 458

 Score = 39.9 bits (91), Expect = 0.36,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 17/40 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
          M     IG +  L   + +  + +N+SN  T G+    V 
Sbjct: 1  MSDILQIGASGVLNYGKAIDVIGENVSNASTTGYARRDVS 40


>gi|260752892|ref|YP_003225785.1| flagellar hook-associated protein FlgK [Zymomonas mobilis subsp.
          mobilis NCIMB 11163]
 gi|258552255|gb|ACV75201.1| flagellar hook-associated protein FlgK [Zymomonas mobilis subsp.
          mobilis NCIMB 11163]
          Length = 458

 Score = 39.9 bits (91), Expect = 0.37,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 17/40 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
          M     IG +  L   + +  + +N+SN  T G+    V 
Sbjct: 1  MSDILQIGASGVLNYGKAIDVIGENVSNASTTGYARRDVS 40


>gi|323178488|gb|EFZ64066.1| flagella basal body rod family protein [Escherichia coli 1180]
          Length = 218

 Score = 39.5 bits (90), Expect = 0.37,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 22/77 (28%), Gaps = 1/77 (1%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
              NIG +     +  L+  A N +N  T G+     + S + GA     +   + V  
Sbjct: 1  MDMINIGYSGASTAQVELNVTAQNTANAMTTGYTRQVAEISTI-GASGGSPNSAGNGVQV 59

Query: 62 GKEYLSKEVGSFISTGT 78
                           
Sbjct: 60 DSIRRVSNQYQVNQVWY 76


>gi|168180910|ref|ZP_02615574.1| flagellar basal-body rod protein FlgB [Clostridium botulinum NCTC
          2916]
 gi|170758458|ref|YP_001787985.1| flagellar basal body rod protein FlgB [Clostridium botulinum A3
          str. Loch Maree]
 gi|169405447|gb|ACA53858.1| flagellar basal-body rod protein FlgB [Clostridium botulinum A3
          str. Loch Maree]
 gi|182668259|gb|EDT80238.1| flagellar basal-body rod protein FlgB [Clostridium botulinum NCTC
          2916]
 gi|322806997|emb|CBZ04567.1| flagellar basal-body rod protein FlgB [Clostridium botulinum
          H04402 065]
          Length = 133

 Score = 39.5 bits (90), Expect = 0.37,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 27/58 (46%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSK 68
          +  A   R   +++N++N +T  ++   V F E +    N+I+ K++      + +  
Sbjct: 19 SMDASSYRGKVISNNIANYNTPDYKRHYVTFEETLKDNLNNINMKVTAEKHMNDGVEF 76


>gi|192289145|ref|YP_001989750.1| flagellar hook-associated protein FlgK [Rhodopseudomonas
          palustris TIE-1]
 gi|192282894|gb|ACE99274.1| flagellar hook-associated protein FlgK [Rhodopseudomonas
          palustris TIE-1]
          Length = 587

 Score = 39.5 bits (90), Expect = 0.37,   Method: Composition-based stats.
 Identities = 9/33 (27%), Positives = 16/33 (48%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39
          I  +   A + ++S  + N+SN DT G+     
Sbjct: 9  IAFSGLAATQVQISVTSANISNADTTGYTKKTA 41


>gi|116327146|ref|YP_796866.1| flagellar basal body rod protein FlgB [Leptospira borgpetersenii
          serovar Hardjo-bovis L550]
 gi|116332197|ref|YP_801915.1| flagellar basal body rod protein FlgB [Leptospira borgpetersenii
          serovar Hardjo-bovis JB197]
 gi|116119890|gb|ABJ77933.1| Endoflagellar proximal basal body rod protein [Leptospira
          borgpetersenii serovar Hardjo-bovis L550]
 gi|116125886|gb|ABJ77157.1| Endoflagellar proximal basal body rod protein [Leptospira
          borgpetersenii serovar Hardjo-bovis JB197]
          Length = 143

 Score = 39.5 bits (90), Expect = 0.37,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 16/41 (39%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51
                 +   ++DN++N D   F+  +V F  ++      
Sbjct: 17 GMNNSILKRKVISDNIANADVPHFKRSEVIFESMIKRAIES 57


>gi|21672601|ref|NP_660668.1| flagellar basal-body rod protein FlgB [Buchnera aphidicola str.
          Sg (Schizaphis graminum)]
 gi|25008459|sp|Q8K9K9|FLGB_BUCAP RecName: Full=Flagellar basal-body rod protein flgB
 gi|21623232|gb|AAM67879.1| flagellar basal-body rod protein FlgB [Buchnera aphidicola str.
          Sg (Schizaphis graminum)]
          Length = 133

 Score = 39.5 bits (90), Expect = 0.37,   Method: Composition-based stats.
 Identities = 8/54 (14%), Positives = 23/54 (42%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65
               +R   ++ N++N DT  ++ + + F + +  I    +  I+   +   +
Sbjct: 16 LNLYAKRQEILSSNIANADTPNYKAMDINFKDEMDKITKKSNLDITLTKTSSHH 69


>gi|300854205|ref|YP_003779189.1| flagellar basal body protein FlgB [Clostridium ljungdahlii DSM
          13528]
 gi|300434320|gb|ADK14087.1| flagellar basal body protein FlgB [Clostridium ljungdahlii DSM
          13528]
          Length = 133

 Score = 39.5 bits (90), Expect = 0.37,   Method: Composition-based stats.
 Identities = 13/75 (17%), Positives = 28/75 (37%)

Query: 6  NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65
           +      A E R   ++ N+SN +T G++   V F E +    ++++ K       K  
Sbjct: 14 YLLARGLDAAEARSQAISSNISNINTAGYKRKYVTFEENLKNSVDNLELKTDDAKHIKMG 73

Query: 66 LSKEVGSFISTGTEL 80
                +  +  +  
Sbjct: 74 NDYGAITTNTDSSTS 88


>gi|292670031|ref|ZP_06603457.1| flagellar hook-associated protein [Selenomonas noxia ATCC 43541]
 gi|292648332|gb|EFF66304.1| flagellar hook-associated protein [Selenomonas noxia ATCC 43541]
          Length = 564

 Score = 39.5 bits (90), Expect = 0.37,   Method: Composition-based stats.
 Identities = 4/42 (9%), Positives = 16/42 (38%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            S  +   E+  M+     + + + ++   ++ +   I +  
Sbjct: 519 TSGVDWNEELTNMLKFQTGYGACSRVLTSMDEMLDRLINSTG 560



 Score = 36.0 bits (81), Expect = 4.6,   Method: Composition-based stats.
 Identities = 8/70 (11%), Positives = 19/70 (27%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
               +  L TV  N++N  T G+   +V  +      +  +   +              
Sbjct: 4  GIQNNQLSLDTVGHNITNASTEGYSRQRVDSAATNYQERPSLYGNVYVGGGVDVVALNRA 63

Query: 71 GSFISTGTEL 80
           +  +     
Sbjct: 64 RNVYADKQYW 73


>gi|289612744|emb|CBI60033.1| unnamed protein product [Sordaria macrospora]
          Length = 90

 Score = 39.5 bits (90), Expect = 0.37,   Method: Composition-based stats.
 Identities = 4/36 (11%), Positives = 15/36 (41%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +   E+  M+   + + +   ++   +  + E +R
Sbjct: 52  VDEPRELVDMLDAARTYQNNVEVMSTAKSLITETLR 87


>gi|110677962|ref|YP_680969.1| flagellar hook-associated protein FlgK [Roseobacter denitrificans
          OCh 114]
 gi|109454078|gb|ABG30283.1| flagellar hook-associated protein FlgK [Roseobacter denitrificans
          OCh 114]
          Length = 481

 Score = 39.5 bits (90), Expect = 0.37,   Method: Composition-based stats.
 Identities = 5/31 (16%), Positives = 14/31 (45%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGF 34
          + +  +    A  +    ++ N++N  T G+
Sbjct: 6  ALSNAMTGLRAAGRTSEVISANLANAMTPGY 36



 Score = 39.5 bits (90), Expect = 0.47,   Method: Composition-based stats.
 Identities = 6/36 (16%), Positives = 19/36 (52%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +S  E+ +++ + Q + +   +I+  ++ M   +R
Sbjct: 445 VDSDQELQRLLIVEQAYAANARMIEAADEMMQTILR 480


>gi|299822287|ref|ZP_07054173.1| flagellar basal-body rod protein FlgC [Listeria grayi DSM 20601]
 gi|299815816|gb|EFI83054.1| flagellar basal-body rod protein FlgC [Listeria grayi DSM 20601]
          Length = 136

 Score = 39.5 bits (90), Expect = 0.37,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 22/42 (52%)

Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236
           + G++  +N +   EM  ++   + + + T+ +  NEK + +
Sbjct: 88  QDGYVRYANIDLTAEMTNIMVGQKMYAANTSALQANEKMLDK 129



 Score = 35.6 bits (80), Expect = 5.4,   Method: Composition-based stats.
 Identities = 8/30 (26%), Positives = 15/30 (50%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTD 30
          M  S N   +A  A +  +   +DN++N +
Sbjct: 1  MFESINTNGSALNAAKTWMEISSDNIANAN 30


>gi|114762176|ref|ZP_01441644.1| flagellar hook-associated protein K [Pelagibaca bermudensis
           HTCC2601]
 gi|114545200|gb|EAU48203.1| flagellar hook-associated protein K [Roseovarius sp. HTCC2601]
          Length = 486

 Score = 39.5 bits (90), Expect = 0.37,   Method: Composition-based stats.
 Identities = 7/42 (16%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 199 LEDS-NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           LE S   ++  E+ +++ + Q + +   +I   ++ M   + 
Sbjct: 444 LELSKGVDTDAELQELLRIEQHYAANARVITTVDELMQTLMN 485



 Score = 35.2 bits (79), Expect = 8.9,   Method: Composition-based stats.
 Identities = 7/31 (22%), Positives = 14/31 (45%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGF 34
          + +  L+   A  +    VA N++N  T  +
Sbjct: 6  ALSNALSGLTANSRSAGLVASNIANATTESY 36


>gi|28900120|ref|NP_799775.1| flagellar basal body rod protein FlgC [Vibrio parahaemolyticus RIMD
           2210633]
 gi|153837089|ref|ZP_01989756.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           AQ3810]
 gi|260365770|ref|ZP_05778266.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           K5030]
 gi|260880692|ref|ZP_05893047.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           AN-5034]
 gi|260897702|ref|ZP_05906198.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           Peru-466]
 gi|260899387|ref|ZP_05907782.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           AQ4037]
 gi|1272366|gb|AAA97474.1| LfgC [Vibrio parahaemolyticus]
 gi|28808403|dbj|BAC61608.1| LfgC [Vibrio parahaemolyticus RIMD 2210633]
 gi|149749677|gb|EDM60422.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           AQ3810]
 gi|308086219|gb|EFO35914.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           Peru-466]
 gi|308092577|gb|EFO42272.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           AN-5034]
 gi|308109204|gb|EFO46744.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           AQ4037]
 gi|308114992|gb|EFO52532.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus
           K5030]
 gi|328470099|gb|EGF41010.1| flagellar basal body rod protein FlgC [Vibrio parahaemolyticus
           10329]
          Length = 144

 Score = 39.5 bits (90), Expect = 0.37,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 19/43 (44%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   + + + EM  M+  T+ F +   ++   +      +R
Sbjct: 97  GYVYYPDIDVVAEMADMMSATRSFETNVEVLANVKSMQQGLLR 139


>gi|150019083|ref|YP_001311337.1| flagellar basal body rod protein FlgB [Clostridium beijerinckii
          NCIMB 8052]
 gi|149905548|gb|ABR36381.1| flagellar basal-body rod protein FlgB [Clostridium beijerinckii
          NCIMB 8052]
          Length = 134

 Score = 39.5 bits (90), Expect = 0.37,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 19/40 (47%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50
             A   R  T+A+NM+N +T  ++   V F E +    +
Sbjct: 18 GIKASNVRAKTIANNMANVNTKDYKRFNVVFEENLKNQGD 57


>gi|304438222|ref|ZP_07398164.1| flagellar hook-associated protein FlgK [Selenomonas sp. oral taxon
           149 str. 67H29BP]
 gi|304368829|gb|EFM22512.1| flagellar hook-associated protein FlgK [Selenomonas sp. oral taxon
           149 str. 67H29BP]
          Length = 574

 Score = 39.5 bits (90), Expect = 0.38,   Method: Composition-based stats.
 Identities = 4/39 (10%), Positives = 15/39 (38%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            +   E+  MI     + + + ++   ++ +   I +  
Sbjct: 532 VDWNEELTNMIKFQTGYGACSRVLTSMDEILDRLINSTG 570



 Score = 37.9 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 8/73 (10%), Positives = 20/73 (27%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
            N  +      +  L T   N++N  T G+   +V  +      +  +   +       
Sbjct: 7  GLNTMVRGIQNNQLSLDTTGHNITNASTEGYSRQRVDSAATNYQERPSLYGNVYVGGGVD 66

Query: 64 EYLSKEVGSFIST 76
                  +  + 
Sbjct: 67 VVALNRARNIYAD 79


>gi|239817151|ref|YP_002946061.1| flagellar hook-associated protein FlgK [Variovorax paradoxus S110]
 gi|239803728|gb|ACS20795.1| flagellar hook-associated protein FlgK [Variovorax paradoxus S110]
          Length = 652

 Score = 39.5 bits (90), Expect = 0.38,   Method: Composition-based stats.
 Identities = 15/148 (10%), Positives = 40/148 (27%), Gaps = 3/148 (2%)

Query: 91  ALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ 150
              +   +  T     +    G  V  SG     D  ++        +  N    G + +
Sbjct: 504 NYAAGTAVPYTAGASIRFD--GIEVKLSGAPADGDTFTIGKNAGGVSDGSNALRLGALQR 561

Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEM 210
           K  +      ++   ++  V    +        +  ++     ++      S  N   E 
Sbjct: 562 KTAMDGGTSTFNGAFAK-LVSEVGNRAMEIRVASATQEGVTGQIRASRDSISGVNQDEET 620

Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAI 238
             ++   Q + +   +I          +
Sbjct: 621 ANLLMYQQMYQANAKVIQTASTMFDAIL 648



 Score = 38.3 bits (87), Expect = 0.90,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 14/38 (36%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39
           + F  GL+        L T A N +N  T G+     
Sbjct: 1  MSMFQTGLSGLSVARSALMTTAHNTANVYTAGYSRQTA 38


>gi|308064341|gb|ADO06228.1| flagellar basal body rod protein FlgB [Helicobacter pylori
          Sat464]
          Length = 140

 Score = 39.5 bits (90), Expect = 0.38,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 21/48 (43%), Gaps = 2/48 (4%)

Query: 1  MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46
          M    +F +G  A      R   +A N++N DT  +R   + F  V+ 
Sbjct: 1  MDFSKAFGLGYKALDYRALRQDMIASNIANVDTPFYRPKDLDFESVLA 48


>gi|308184859|ref|YP_003928992.1| flagellar hook-associated protein FlgK [Helicobacter pylori SJM180]
 gi|308060779|gb|ADO02675.1| flagellar hook-associated protein FlgK [Helicobacter pylori SJM180]
          Length = 606

 Score = 39.5 bits (90), Expect = 0.38,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 14/37 (37%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  +   EM  +I     + +   +I   ++ +   +
Sbjct: 566 SQVSVDEEMLNLIKFQSGYAANAKVISAIDRMIDTLL 602



 Score = 38.7 bits (88), Expect = 0.67,   Method: Composition-based stats.
 Identities = 6/29 (20%), Positives = 11/29 (37%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTD 30
           +S N       A +  +    +N+SN  
Sbjct: 5  LSSLNTSYTGLQAHQSMVDVTGNNISNAS 33


>gi|229109195|ref|ZP_04238794.1| Flagellar hook-associated protein FlgK [Bacillus cereus Rock1-15]
 gi|228674205|gb|EEL29450.1| Flagellar hook-associated protein FlgK [Bacillus cereus Rock1-15]
          Length = 432

 Score = 39.5 bits (90), Expect = 0.38,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 25/53 (47%)

Query: 6  NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
          N  L+  LA +  L T   N+SN  T G+    V +  V  +  +  +Q+I +
Sbjct: 7  NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSVGASNGHTPEQRIGY 59



 Score = 37.9 bits (86), Expect = 1.3,   Method: Composition-based stats.
 Identities = 5/34 (14%), Positives = 11/34 (32%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
            N   EM  ++   + F + +  I    +     
Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427


>gi|218235346|ref|YP_002366423.1| flagellar hook-associated protein FlgK [Bacillus cereus B4264]
 gi|229069290|ref|ZP_04202580.1| Flagellar hook-associated protein FlgK [Bacillus cereus F65185]
 gi|229078920|ref|ZP_04211472.1| Flagellar hook-associated protein FlgK [Bacillus cereus Rock4-2]
 gi|229178147|ref|ZP_04305518.1| Flagellar hook-associated protein FlgK [Bacillus cereus 172560W]
 gi|218163303|gb|ACK63295.1| putative flagellar hook-associated protein [Bacillus cereus
          B4264]
 gi|228605277|gb|EEK62727.1| Flagellar hook-associated protein FlgK [Bacillus cereus 172560W]
 gi|228704334|gb|EEL56768.1| Flagellar hook-associated protein FlgK [Bacillus cereus Rock4-2]
 gi|228713777|gb|EEL65662.1| Flagellar hook-associated protein FlgK [Bacillus cereus F65185]
          Length = 432

 Score = 39.5 bits (90), Expect = 0.38,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 25/53 (47%)

Query: 6  NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
          N  L+  LA +  L T   N+SN  T G+    V +  V  +  +  +Q+I +
Sbjct: 7  NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSVGASNGHTPEQRIGY 59



 Score = 37.9 bits (86), Expect = 1.3,   Method: Composition-based stats.
 Identities = 5/34 (14%), Positives = 11/34 (32%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
            N   EM  ++   + F + +  I    +     
Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427


>gi|87119670|ref|ZP_01075567.1| Flagellar hook-associated protein [Marinomonas sp. MED121]
 gi|86165146|gb|EAQ66414.1| Flagellar hook-associated protein [Marinomonas sp. MED121]
          Length = 659

 Score = 39.5 bits (90), Expect = 0.38,   Method: Composition-based stats.
 Identities = 16/101 (15%), Positives = 30/101 (29%), Gaps = 1/101 (0%)

Query: 1   MQTSFN-IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFV 59
           M      IGL+  LA   ++ T   N +N +T G+       S +          K    
Sbjct: 1   MAGDLYSIGLSGVLASSAQIVTTGQNTANVNTEGYNRQSTNLSTLQNGGVQVGSTKRVVD 60

Query: 60  ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL 100
                 +  +  +F    +        D  F+ ++      
Sbjct: 61  EFVNTQMRADTSNFNYFESYYQQGTIADEIFSDKATSLNTY 101



 Score = 39.1 bits (89), Expect = 0.51,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 17/43 (39%)

Query: 200 EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           E S  +   E   +I     + + + +I   EKS    + ++ 
Sbjct: 617 EVSAVSLDEEAVNLIRYQNSYAASSQVISAAEKSFQTLLNSLR 659


>gi|57242333|ref|ZP_00370272.1| flagellar basal-body rod protein FlgB [Campylobacter upsaliensis
          RM3195]
 gi|57017013|gb|EAL53795.1| flagellar basal-body rod protein FlgB [Campylobacter upsaliensis
          RM3195]
          Length = 143

 Score = 39.5 bits (90), Expect = 0.38,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 21/49 (42%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
          +A      R   +  N++N DT  ++   V+F   +    N+I +K   
Sbjct: 13 SALAGRNLRNQLINSNLANVDTPFYKARDVEFETALVRRANEIFKKEQG 61


>gi|295690698|ref|YP_003594391.1| flagellar basal-body rod protein FlgC [Caulobacter segnis ATCC
           21756]
 gi|295432601|gb|ADG11773.1| flagellar basal-body rod protein FlgC [Caulobacter segnis ATCC
           21756]
          Length = 139

 Score = 39.5 bits (90), Expect = 0.38,   Method: Composition-based stats.
 Identities = 7/34 (20%), Positives = 16/34 (47%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
           G+++  N NS+ E   M    + + +   +I+  
Sbjct: 93  GYVKLPNVNSLVEALDMKEAQRAYEANLNVIETA 126



 Score = 38.7 bits (88), Expect = 0.67,   Method: Composition-based stats.
 Identities = 9/95 (9%), Positives = 25/95 (26%), Gaps = 8/95 (8%)

Query: 12  QLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
             A + R+  +A+N++N ++         +R     F          + Q +       +
Sbjct: 19  LRAQQGRMRVIAENIANANSTATTAGGDPYRRQLPIFRPTKVQGAEGV-QMVRVDPDQSD 77

Query: 65  YLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
           + ++      +        L               
Sbjct: 78  FKTEYDPGNPAADANGYVKLPNVNSLVEALDMKEA 112


>gi|87307389|ref|ZP_01089534.1| flagellar basal-body rod potein FlgC [Blastopirellula marina DSM
           3645]
 gi|87290129|gb|EAQ82018.1| flagellar basal-body rod potein FlgC [Blastopirellula marina DSM
           3645]
          Length = 140

 Score = 39.5 bits (90), Expect = 0.38,   Method: Composition-based stats.
 Identities = 5/46 (10%), Positives = 23/46 (50%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           G++     N + +M   +  ++ + +   +++ ++    +++R +A
Sbjct: 95  GYVAHPRVNMVEQMVDALEASRAYEANIGVVEISKNLAAQSLRILA 140



 Score = 38.3 bits (87), Expect = 0.89,   Method: Composition-based stats.
 Identities = 9/30 (30%), Positives = 16/30 (53%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTD 30
          M  + +I  +A +A   RL+ V  N++N  
Sbjct: 1  MNGALDISSSAMVAQRIRLNAVTSNIANMS 30


>gi|258592508|emb|CBE68817.1| putative Flagellar basal-body rod protein flgB [NC10 bacterium
          'Dutch sediment']
          Length = 120

 Score = 39.5 bits (90), Expect = 0.39,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 23/49 (46%)

Query: 13 LALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           A   R   +A N++N DT G+R ++V FSE +       +     V +
Sbjct: 17 RAASLRHQVLARNIANIDTPGYRPMEVDFSEELRLASEAGEPPAMVVRT 65


>gi|152997585|ref|YP_001342420.1| flagellar basal-body rod protein FlgB [Marinomonas sp. MWYL1]
 gi|150838509|gb|ABR72485.1| flagellar basal-body rod protein FlgB [Marinomonas sp. MWYL1]
          Length = 130

 Score = 39.5 bits (90), Expect = 0.39,   Method: Composition-based stats.
 Identities = 9/73 (12%), Positives = 25/73 (34%)

Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIS 75
            R + +A+N++N DT  ++   + F   +      +    +           +    + 
Sbjct: 20 SARAAVLANNIANADTPNYKARDISFDSFLNNESKKLQLAGTNSRHISGEGFSDEPEGLL 79

Query: 76 TGTELDFALEGDA 88
                 +L+G+ 
Sbjct: 80 YRNANQPSLDGNT 92


>gi|39933725|ref|NP_946001.1| flagellar hook-associated protein 1 FlgK [Rhodopseudomonas
          palustris CGA009]
 gi|39647572|emb|CAE26092.1| possible flagellar hook-associated protein 1 (HAP1, FlgK protein)
          [Rhodopseudomonas palustris CGA009]
          Length = 587

 Score = 39.5 bits (90), Expect = 0.39,   Method: Composition-based stats.
 Identities = 9/33 (27%), Positives = 16/33 (48%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39
          I  +   A + ++S  + N+SN DT G+     
Sbjct: 9  IAFSGLAATQVQISVTSANISNADTTGYTKKTA 41


>gi|83747657|ref|ZP_00944693.1| FlgB [Ralstonia solanacearum UW551]
 gi|207728343|ref|YP_002256737.1| flagellar basal-body rod protein flgb [Ralstonia solanacearum
           MolK2]
 gi|207739740|ref|YP_002258133.1| flagellar basal-body rod protein flgb [Ralstonia solanacearum
           IPO1609]
 gi|83725709|gb|EAP72851.1| FlgB [Ralstonia solanacearum UW551]
 gi|206591589|emb|CAQ57201.1| flagellar basal-body rod protein flgb [Ralstonia solanacearum
           MolK2]
 gi|206593122|emb|CAQ60028.1| flagellar basal-body rod protein flgb [Ralstonia solanacearum
           IPO1609]
          Length = 153

 Score = 39.5 bits (90), Expect = 0.39,   Method: Composition-based stats.
 Identities = 17/121 (14%), Positives = 35/121 (28%), Gaps = 3/121 (2%)

Query: 11  AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
           A     QR   +A N++N DT  ++     F   +             + +         
Sbjct: 15  ALRLRSQRHQLLASNIANADTPSYKARDFDFQSALQKATGQQSGSSLPMTATAAGHLTAA 74

Query: 71  GSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVP 130
           G+  +    +  +L   +            T     + + DG+ V   G+       +V 
Sbjct: 75  GAAAADVVPMQASLSAQSQADALQGEVEYRT---SQQPSIDGNTVDMDGERMRFADNTVR 131

Query: 131 I 131
            
Sbjct: 132 Y 132


>gi|149912829|ref|ZP_01901363.1| flagellar basal-body rod protein; FlgB [Roseobacter sp. AzwK-3b]
 gi|149813235|gb|EDM73061.1| flagellar basal-body rod protein; FlgB [Roseobacter sp. AzwK-3b]
          Length = 129

 Score = 39.5 bits (90), Expect = 0.39,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 1/46 (2%)

Query: 17 QRLSTVADNMSNTDTVGF-RTIKVKFSEVVGAIKNDIDQKISFVAS 61
           R + +A N++N+DT G+       FS ++G        K + V  
Sbjct: 20 TRQAVIAQNLANSDTPGYAARDVAPFSTLIGTDAPQFTSKATRVTH 65


>gi|294084421|ref|YP_003551179.1| flagellar basal-body rod protein FlgB [Candidatus
          Puniceispirillum marinum IMCC1322]
 gi|292663994|gb|ADE39095.1| flagellar basal-body rod protein FlgB [Candidatus
          Puniceispirillum marinum IMCC1322]
          Length = 128

 Score = 39.5 bits (90), Expect = 0.39,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 27/79 (34%), Gaps = 1/79 (1%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69
          AA     +R   +A N++N  T  F+   + F + +  +           A         
Sbjct: 13 AALSLRSKRNDILASNIANAATPNFKARDINFEDEISRVA-GYGTMDGSDARHIRTAVNG 71

Query: 70 VGSFISTGTELDFALEGDA 88
              +     L+ +L+G+ 
Sbjct: 72 RPDQVLYRQPLNPSLDGNT 90


>gi|207091984|ref|ZP_03239771.1| flagellar basal body rod protein FlgB [Helicobacter pylori
          HPKX_438_AG0C1]
          Length = 140

 Score = 39.5 bits (90), Expect = 0.39,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 18/35 (51%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          R   +A N++N DT  +R   + F  V+   K +I
Sbjct: 20 RQDMIASNIANVDTPFYRPKDLDFESVLAEKKAEI 54


>gi|152980267|ref|YP_001353108.1| FlgB flagellar basal body protein [Janthinobacterium sp.
          Marseille]
 gi|151280344|gb|ABR88754.1| FlgB flagellar basal body protein [Janthinobacterium sp.
          Marseille]
          Length = 139

 Score = 39.5 bits (90), Expect = 0.39,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 19/48 (39%), Gaps = 3/48 (6%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI 48
          M       L+       R   +A N++N DT  F+   V F++ +   
Sbjct: 8  MLRFQETALS-LRGQ--RQQILASNIANADTPNFKARDVDFNKALQGA 52


>gi|118589965|ref|ZP_01547369.1| flagellar hook-associated protein K [Stappia aggregata IAM 12614]
 gi|118437462|gb|EAV44099.1| flagellar hook-associated protein K [Stappia aggregata IAM 12614]
          Length = 454

 Score = 39.5 bits (90), Expect = 0.39,   Method: Composition-based stats.
 Identities = 17/137 (12%), Positives = 39/137 (28%), Gaps = 14/137 (10%)

Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS--------- 166
              G    L    +   +         G  G   +  ++++     +V  S         
Sbjct: 314 DQGGDLDRLRDGGISDPLDPNYNYNPSGAAGFSDRLQELVSAFDKDTVFDSGVELDATDS 373

Query: 167 -QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSN----ANSMYEMGQMIHLTQKFN 221
             GF     S +                +     E+ N     N   EM  ++ + + ++
Sbjct: 374 LSGFAASSVSWLEAGRKTMTSNVEVQTVILSRTAENLNNKTGVNIDEEMTLLLEIERSYS 433

Query: 222 SITTLIDENEKSMLEAI 238
           + T LI   +  + + +
Sbjct: 434 AATRLISAVDAMLEDLL 450


>gi|296282273|ref|ZP_06860271.1| flagellar hook-associated protein FlgK [Citromicrobium
           bathyomarinum JL354]
          Length = 446

 Score = 39.5 bits (90), Expect = 0.40,   Method: Composition-based stats.
 Identities = 6/39 (15%), Positives = 11/39 (28%)

Query: 200 EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           E S  +   E   +I   Q F +    +          +
Sbjct: 404 EQSGVDLDNEAANLIRYQQAFQASGKAMQVASDIFDTLL 442


>gi|218703531|ref|YP_002411050.1| lateral flagellar hook associated FlgK-like protein [Escherichia
          coli UMN026]
 gi|293403361|ref|ZP_06647452.1| predicted protein [Escherichia coli FVEC1412]
 gi|298378972|ref|ZP_06988853.1| flagellar hook-associated protein 1 FlgK [Escherichia coli
          FVEC1302]
 gi|300899458|ref|ZP_07117706.1| flagellar hook-associated protein FlgK [Escherichia coli MS
          198-1]
 gi|218430628|emb|CAR11494.1| Lateral flagellar hook associated protein 1 (FlgK-like)
          [Escherichia coli UMN026]
 gi|291429214|gb|EFF02234.1| predicted protein [Escherichia coli FVEC1412]
 gi|298280085|gb|EFI21589.1| flagellar hook-associated protein 1 FlgK [Escherichia coli
          FVEC1302]
 gi|300356937|gb|EFJ72807.1| flagellar hook-associated protein FlgK [Escherichia coli MS
          198-1]
          Length = 458

 Score = 39.5 bits (90), Expect = 0.40,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 24/78 (30%), Gaps = 2/78 (2%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M    NIG +     +  L+  A N +NT T G+     + S + GA     +   + V 
Sbjct: 1  MD-MINIGYSGASTAQVELNVTAQNTANTMTTGYTRQVAEISTI-GASGGSPNSAGNGVQ 58

Query: 61 SGKEYLSKEVGSFISTGT 78
                            
Sbjct: 59 VDSIRRVSNQYQVNQVWY 76


>gi|300693334|ref|YP_003749307.1| flagellar component of cell-proximal portion of basal-body rod,
           protein flgb [Ralstonia solanacearum PSI07]
 gi|299075371|emb|CBJ34666.2| flagellar component of cell-proximal portion of basal-body rod,
           protein flgb [Ralstonia solanacearum PSI07]
          Length = 175

 Score = 39.5 bits (90), Expect = 0.40,   Method: Composition-based stats.
 Identities = 18/121 (14%), Positives = 36/121 (29%), Gaps = 3/121 (2%)

Query: 11  AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
           A     QR   +A N++N DT  ++     F   +             + +         
Sbjct: 37  ALRLRSQRHQLLASNIANADTPSYKARDFDFQSALQKAVGQQSGSSLPMTATAAGHLTAA 96

Query: 71  GSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVP 130
           G+  +  T +  +L   +            T     + + DG+ V   G+       +V 
Sbjct: 97  GAPAADVTPMQASLSAQSQADALQGEVQYRT---SQQPSIDGNTVDMDGERMRFADNTVR 153

Query: 131 I 131
            
Sbjct: 154 Y 154


>gi|332674371|gb|AEE71188.1| flagellar basal-body rod protein FlgB [Helicobacter pylori 83]
          Length = 140

 Score = 39.5 bits (90), Expect = 0.40,   Method: Composition-based stats.
 Identities = 9/29 (31%), Positives = 15/29 (51%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVG 46
          R   +A N++N DT  +R   + F  V+ 
Sbjct: 20 RQDMIASNIANVDTPFYRPKDLDFESVLA 48


>gi|307638244|gb|ADN80694.1| Flagellar basal-body rod protein [Helicobacter pylori 908]
 gi|325996837|gb|ADZ52242.1| Flagellar basal-body rod protein [Helicobacter pylori 2018]
 gi|325998429|gb|ADZ50637.1| Flagellar basal-body rod protein [Helicobacter pylori 2017]
          Length = 140

 Score = 39.5 bits (90), Expect = 0.40,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 18/35 (51%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          R   +A N++N DT  +R   + F  V+   K +I
Sbjct: 20 RQDMIASNIANVDTPFYRPKDLDFESVLAEKKAEI 54


>gi|188528351|ref|YP_001911038.1| flagellar basal body rod protein FlgB [Helicobacter pylori
          Shi470]
 gi|188144591|gb|ACD49008.1| flagellar basal body rod protein FlgB [Helicobacter pylori
          Shi470]
          Length = 140

 Score = 39.5 bits (90), Expect = 0.40,   Method: Composition-based stats.
 Identities = 9/29 (31%), Positives = 15/29 (51%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVG 46
          R   +A N++N DT  +R   + F  V+ 
Sbjct: 20 RQDMIASNIANVDTPFYRPKDLDFESVLA 48


>gi|15612532|ref|NP_224185.1| flagellar basal body rod protein FlgB [Helicobacter pylori J99]
 gi|4156088|gb|AAD07041.1| FLAGELLAR BASAL-BODY ROD PROTEIN [Helicobacter pylori J99]
          Length = 140

 Score = 39.5 bits (90), Expect = 0.41,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
          R   +A N++N DT  +R   + F  V+   K +I +  S 
Sbjct: 20 RQDMIASNIANVDTPFYRPKDLDFESVLAEKKAEIFENQSG 60


>gi|264678617|ref|YP_003278524.1| flagellar basal-body rod protein FlgB [Comamonas testosteroni
          CNB-2]
 gi|299533500|ref|ZP_07046879.1| flagellar basal-body rod protein FlgB [Comamonas testosteroni
          S44]
 gi|262209130|gb|ACY33228.1| flagellar basal-body rod protein FlgB [Comamonas testosteroni
          CNB-2]
 gi|298718507|gb|EFI59485.1| flagellar basal-body rod protein FlgB [Comamonas testosteroni
          S44]
          Length = 127

 Score = 39.5 bits (90), Expect = 0.41,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 21/46 (45%)

Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
          +R+  +A N++N DT G++   + F   +   +  +    S   S 
Sbjct: 16 KRMEVLASNIANADTPGYQAKDIDFKAALEETQRQMLTVQSTNKSH 61


>gi|83646784|ref|YP_435219.1| flagellar basal body protein [Hahella chejuensis KCTC 2396]
 gi|83634827|gb|ABC30794.1| Flagellar basal body protein [Hahella chejuensis KCTC 2396]
          Length = 125

 Score = 39.5 bits (90), Expect = 0.41,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 20/40 (50%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50
          +  A + +   +A N++N  T G+R + + F   +  I +
Sbjct: 15 SLDAAQLQQRLIAQNVANASTEGYRAMSLNFKAALQHIDS 54


>gi|229827760|ref|ZP_04453829.1| hypothetical protein GCWU000182_03152 [Abiotrophia defectiva ATCC
          49176]
 gi|229787959|gb|EEP24073.1| hypothetical protein GCWU000182_03152 [Abiotrophia defectiva ATCC
          49176]
          Length = 618

 Score = 39.5 bits (90), Expect = 0.41,   Method: Composition-based stats.
 Identities = 9/37 (24%), Positives = 16/37 (43%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
            +IG       +  L+  A N++N  T G+   +V 
Sbjct: 7  GLDIGTTGLHTYQAALNNTAHNITNAKTEGYSRQQVN 43


>gi|158422261|ref|YP_001523553.1| flagellar basal body rod protein FlgB [Azorhizobium caulinodans ORS
           571]
 gi|158329150|dbj|BAF86635.1| flagellar basal-body rod protein [Azorhizobium caulinodans ORS 571]
          Length = 169

 Score = 39.5 bits (90), Expect = 0.41,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 28/67 (41%), Gaps = 1/67 (1%)

Query: 15  LEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIKNDIDQKISFVASGKEYLSKEVGSF 73
              R +T+  N++N +T G++  +V+ FS V+   +  +              ++   + 
Sbjct: 59  ASVRQATITGNIANANTPGYQAREVEPFSAVMNKTRLSMATTEPGHMGVPFAGAETSKTK 118

Query: 74  ISTGTEL 80
            S   E+
Sbjct: 119 ESDSWEV 125


>gi|317181262|dbj|BAJ59048.1| flagellar basal body rod protein FlgB [Helicobacter pylori F32]
          Length = 140

 Score = 39.5 bits (90), Expect = 0.42,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 18/35 (51%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          R   +A N++N DT  +R   + F  V+   K +I
Sbjct: 20 RQDMIASNIANVDTPFYRPKDLDFESVLAEKKAEI 54


>gi|297516687|ref|ZP_06935073.1| flagellar hook-associated protein FlgK [Escherichia coli OP50]
          Length = 247

 Score = 39.5 bits (90), Expect = 0.42,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 21/52 (40%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M    N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSNLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|210135738|ref|YP_002302177.1| flagellar basal body rod protein FlgB [Helicobacter pylori P12]
 gi|210133706|gb|ACJ08697.1| flagellar basal-body rod protein FlgB [Helicobacter pylori P12]
 gi|317179761|dbj|BAJ57549.1| flagellar basal body rod protein FlgB [Helicobacter pylori F30]
          Length = 140

 Score = 39.5 bits (90), Expect = 0.42,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 18/35 (51%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          R   +A N++N DT  +R   + F  V+   K +I
Sbjct: 20 RQDMIASNIANVDTPFYRPKDLDFESVLAEKKAEI 54


>gi|148258439|ref|YP_001243024.1| putative flagellar hook-associated protein [Bradyrhizobium sp.
           BTAi1]
 gi|146410612|gb|ABQ39118.1| putative flagellar hook-associated protein [Bradyrhizobium sp.
           BTAi1]
          Length = 599

 Score = 39.5 bits (90), Expect = 0.42,   Method: Composition-based stats.
 Identities = 6/36 (16%), Positives = 15/36 (41%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            N   EM ++I L   + +   ++    + +   +R
Sbjct: 563 VNIDEEMSRLIALQTAYAANARVLTAAREMIDLLLR 598



 Score = 38.3 bits (87), Expect = 0.99,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
           +FN   A    L+  + TV+ N++N+   G+    V    
Sbjct: 4  NAFNTATAGLQTLQVAIGTVSQNVANSGVAGYTRRVVSTES 44


>gi|154686034|ref|YP_001421195.1| flagellar basal body rod protein FlgB [Bacillus amyloliquefaciens
          FZB42]
 gi|154351885|gb|ABS73964.1| FlgB [Bacillus amyloliquefaciens FZB42]
          Length = 129

 Score = 39.5 bits (90), Expect = 0.42,   Method: Composition-based stats.
 Identities = 7/35 (20%), Positives = 19/35 (54%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          +   + +N++N DT  ++  KV F  ++    +++
Sbjct: 21 KQKVLTNNIANIDTPNYKAKKVSFRNLLDQETSNL 55


>gi|33592476|ref|NP_880120.1| flagellar basal body rod protein FlgB [Bordetella pertussis
          Tohama I]
 gi|33572122|emb|CAE41664.1| flagellar basal-body rod protein FlgB [Bordetella pertussis
          Tohama I]
 gi|332381893|gb|AEE66740.1| flagellar basal body rod protein FlgB [Bordetella pertussis CS]
          Length = 135

 Score = 39.5 bits (90), Expect = 0.42,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 15/41 (36%), Gaps = 2/41 (4%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51
          A  A   R   ++ N++N DT  ++     F   +      
Sbjct: 17 ALRAQ--RQEVLSSNIANADTPNYKARDFDFKAAMQGALEQ 55


>gi|269965418|ref|ZP_06179537.1| flagellar hook-associated protein 1 [Vibrio alginolyticus 40B]
 gi|269829897|gb|EEZ84127.1| flagellar hook-associated protein 1 [Vibrio alginolyticus 40B]
          Length = 646

 Score = 39.5 bits (90), Expect = 0.43,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 20/35 (57%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39
           N+G  + L  +++L+T   N+SN +T G+    V
Sbjct: 6  LNVGTQSVLTAQRQLNTTGHNISNVNTDGYSRQSV 40



 Score = 37.9 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 5/38 (13%), Positives = 14/38 (36%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           S  N   E   M+   Q + + + ++     +    ++
Sbjct: 607 SGVNLDEEAANMMKFQQAYMASSRVMQAANDTFNTILQ 644


>gi|288940406|ref|YP_003442646.1| flagellar basal-body rod protein FlgB [Allochromatium vinosum DSM
          180]
 gi|288895778|gb|ADC61614.1| flagellar basal-body rod protein FlgB [Allochromatium vinosum DSM
          180]
          Length = 135

 Score = 39.5 bits (90), Expect = 0.43,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 28/54 (51%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK 55
            +F +  +A L   +R   +A N++N DT  +++    F+EV+  ++   ++ 
Sbjct: 6  DKAFGVLPSAVLIKARRAELLASNLANVDTPNYKSRDFHFTEVLAEVEGMSNRM 59


>gi|300936123|ref|ZP_07151062.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 21-1]
 gi|300458701|gb|EFK22194.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 21-1]
          Length = 143

 Score = 39.5 bits (90), Expect = 0.43,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 6/45 (13%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVV 45
          I  +A  A   RL+TVA N++N +         ++     F+ V 
Sbjct: 9  ISGSAMTAQTLRLNTVASNLANANAPASSEAQAYKARSPVFAAVY 53



 Score = 38.3 bits (87), Expect = 0.92,   Method: Composition-based stats.
 Identities = 4/35 (11%), Positives = 15/35 (42%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            N + +M  M+  ++ F +   +++  +      +
Sbjct: 104 VNVVEQMADMMSASRDFETNVDVLNNVKSMQQSLL 138


>gi|114777414|ref|ZP_01452411.1| Flagellar basal-body rod protein FlgB [Mariprofundus ferrooxydans
          PV-1]
 gi|114552196|gb|EAU54698.1| Flagellar basal-body rod protein FlgB [Mariprofundus ferrooxydans
          PV-1]
          Length = 133

 Score = 39.5 bits (90), Expect = 0.44,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 22/42 (52%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51
          +A +A E+    +A N++N DT  F   K  FS+ +  ++  
Sbjct: 13 SALIAREKVQGVLASNIANADTPNFHADKRSFSDFLSELQTG 54


>gi|323975932|gb|EGB71026.1| flagellar basal-body rod protein FlgC [Escherichia coli TW10509]
          Length = 143

 Score = 39.5 bits (90), Expect = 0.44,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 6/45 (13%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVV 45
          I  +A  A   RL+TVA N++N +         ++     F+ V 
Sbjct: 9  ISGSAMTAQTLRLNTVASNLANANAPASSEAQAYKARSPVFAAVY 53



 Score = 38.3 bits (87), Expect = 0.95,   Method: Composition-based stats.
 Identities = 4/35 (11%), Positives = 15/35 (42%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            N + +M  M+  ++ F +   +++  +      +
Sbjct: 104 VNVVEQMADMMSASRDFETNVDVLNNVKSMQQSLL 138


>gi|308183714|ref|YP_003927841.1| flagellar basal body rod protein FlgB [Helicobacter pylori
          PeCan4]
 gi|308065899|gb|ADO07791.1| flagellar basal body rod protein FlgB [Helicobacter pylori
          PeCan4]
          Length = 140

 Score = 39.5 bits (90), Expect = 0.44,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 18/35 (51%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          R   +A N++N DT  +R   + F  V+   K +I
Sbjct: 20 RQDMIASNIANVDTPFYRPKDLDFESVLAEKKAEI 54


>gi|315585966|gb|ADU40347.1| flagellar basal-body rod protein FlgB [Helicobacter pylori 35A]
 gi|317178282|dbj|BAJ56071.1| flagellar basal body rod protein FlgB [Helicobacter pylori F16]
          Length = 140

 Score = 39.5 bits (90), Expect = 0.44,   Method: Composition-based stats.
 Identities = 9/29 (31%), Positives = 15/29 (51%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVG 46
          R   +A N++N DT  +R   + F  V+ 
Sbjct: 20 RQDMIASNIANVDTPFYRPKDLDFESVLA 48


>gi|283784869|ref|YP_003364734.1| flagellar basal-body rod protein FlgB [Citrobacter rodentium
          ICC168]
 gi|282948323|emb|CBG87906.1| flagellar basal-body rod protein FlgB [Citrobacter rodentium
          ICC168]
          Length = 138

 Score = 39.5 bits (90), Expect = 0.44,   Method: Composition-based stats.
 Identities = 12/66 (18%), Positives = 26/66 (39%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   +A N++N DT G+++  + F+  +  +     Q+   ++          
Sbjct: 15 ALNLRAQRQEILAANIANADTPGYQSRDIDFASELKKVMVRGRQETGGISLALTSAQHIP 74

Query: 71 GSFIST 76
              S+
Sbjct: 75 AQAFSS 80


>gi|327254552|gb|EGE66168.1| flagellar basal-body rod protein FlgC [Escherichia coli STEC_7v]
          Length = 143

 Score = 39.5 bits (90), Expect = 0.44,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 6/45 (13%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVV 45
          I  +A  A   RL+TVA N++N +         ++     F+ V 
Sbjct: 9  ISGSAMTAQTLRLNTVASNLANANAPAGSEAQAYKARSPVFAAVY 53



 Score = 38.3 bits (87), Expect = 0.95,   Method: Composition-based stats.
 Identities = 4/35 (11%), Positives = 15/35 (42%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            N + +M  M+  ++ F +   +++  +      +
Sbjct: 104 VNVVEQMADMMSASRDFETNVDVLNNVKSMQQSLL 138


>gi|315638444|ref|ZP_07893621.1| flagellar basal-body rod protein FlgB [Campylobacter upsaliensis
          JV21]
 gi|315481435|gb|EFU72062.1| flagellar basal-body rod protein FlgB [Campylobacter upsaliensis
          JV21]
          Length = 143

 Score = 39.5 bits (90), Expect = 0.44,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 21/49 (42%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
          +A      R   +  N++N DT  ++   V+F   +    N+I +K   
Sbjct: 13 SALAGRNLRNQLINSNLANVDTPFYKARDVEFETALVRRANEIFKKDKG 61


>gi|255030434|ref|ZP_05302385.1| flagellar hook-associated protein FlgK [Listeria monocytogenes
           LO28]
          Length = 435

 Score = 39.5 bits (90), Expect = 0.44,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 14/41 (34%), Gaps = 2/41 (4%)

Query: 198 FLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            LE    N   EM  ++     + + T  ++     M   +
Sbjct: 394 SLEG--VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALL 432


>gi|217033828|ref|ZP_03439253.1| hypothetical protein HP9810_877g32 [Helicobacter pylori 98-10]
 gi|216943726|gb|EEC23169.1| hypothetical protein HP9810_877g32 [Helicobacter pylori 98-10]
 gi|297380733|gb|ADI35620.1| flagellar basal-body rod protein FlgB [Helicobacter pylori v225d]
 gi|308062842|gb|ADO04730.1| flagellar basal body rod protein FlgB [Helicobacter pylori Cuz20]
          Length = 140

 Score = 39.5 bits (90), Expect = 0.44,   Method: Composition-based stats.
 Identities = 9/29 (31%), Positives = 15/29 (51%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVG 46
          R   +A N++N DT  +R   + F  V+ 
Sbjct: 20 RQDMIASNIANVDTPFYRPKDLDFESVLA 48


>gi|308273187|emb|CBX29790.1| hypothetical protein N47_F14850 [uncultured Desulfobacterium sp.]
          Length = 135

 Score = 39.5 bits (90), Expect = 0.45,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 33/91 (36%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
            FNI   A     QR +T++ N+SN +T G+R   + F   +        Q      + 
Sbjct: 9  NIFNILENAIGVAYQRQNTISSNISNLETPGYRPKDIDFKAAMAKAIGSESQISLSGTNA 68

Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALE 93
                   +  +   E +    G  + +++
Sbjct: 69 GHIDLYNEANQEAEAFEEESDWNGVNYVSID 99


>gi|167626152|ref|YP_001676446.1| flagellar basal body rod protein FlgB [Shewanella halifaxensis
          HAW-EB4]
 gi|167356174|gb|ABZ78787.1| flagellar basal-body rod protein FlgB [Shewanella halifaxensis
          HAW-EB4]
          Length = 116

 Score = 39.5 bits (90), Expect = 0.45,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 26/69 (37%)

Query: 21 TVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTEL 80
           +A N++N +T G++   + F  V+  I + +    S+ AS +               + 
Sbjct: 25 MLAGNLANAETPGYKARDLDFKSVMLQINSGMSPDRSYQASYRVPYQTSADQNTVELGKE 84

Query: 81 DFALEGDAW 89
                +A 
Sbjct: 85 QARYSQNAM 93


>gi|317182785|dbj|BAJ60569.1| flagellar basal body rod protein FlgB [Helicobacter pylori F57]
          Length = 140

 Score = 39.5 bits (90), Expect = 0.45,   Method: Composition-based stats.
 Identities = 9/29 (31%), Positives = 15/29 (51%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVG 46
          R   +A N++N DT  +R   + F  V+ 
Sbjct: 20 RQDMIASNIANVDTPFYRPKDLDFESVLA 48


>gi|306813306|ref|ZP_07447499.1| flagellar basal body rod protein FlgC [Escherichia coli NC101]
 gi|305854069|gb|EFM54508.1| flagellar basal body rod protein FlgC [Escherichia coli NC101]
          Length = 143

 Score = 39.5 bits (90), Expect = 0.45,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 6/45 (13%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVV 45
          I  +A  A   RL+TVA N++N +         ++     F+ V 
Sbjct: 9  ISGSAMTAQTLRLNTVASNLANANAPASSEAQAYKARSPVFAAVY 53



 Score = 38.3 bits (87), Expect = 0.96,   Method: Composition-based stats.
 Identities = 4/35 (11%), Positives = 15/35 (42%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            N + +M  M+  ++ F +   +++  +      +
Sbjct: 104 VNVVEQMADMMSASRDFETNVDVLNNVKSMQQSLL 138


>gi|183598614|ref|ZP_02960107.1| hypothetical protein PROSTU_02014 [Providencia stuartii ATCC
          25827]
 gi|188020793|gb|EDU58833.1| hypothetical protein PROSTU_02014 [Providencia stuartii ATCC
          25827]
          Length = 137

 Score = 39.5 bits (90), Expect = 0.46,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 25/66 (37%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A    E R + +A N++N DT G++   + FS  +     +   K   VA          
Sbjct: 15 ALSIREARQTILAANIANADTPGYQARDIDFSRQLQQAMKNGVVKGKGVALAVTSKGHIE 74

Query: 71 GSFIST 76
          G  +  
Sbjct: 75 GRNMKQ 80


>gi|254519425|ref|ZP_05131481.1| flagellar basal-body rod protein FlgB [Clostridium sp. 7_2_43FAA]
 gi|226913174|gb|EEH98375.1| flagellar basal-body rod protein FlgB [Clostridium sp. 7_2_43FAA]
          Length = 141

 Score = 39.5 bits (90), Expect = 0.46,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
             A   R   +A+NM+N +T  F+   V F E
Sbjct: 25 GLDASALREKVIANNMANINTKDFKKSYVSFEE 57


>gi|170021362|ref|YP_001726316.1| flagellar basal body rod protein FlgC [Escherichia coli ATCC
          8739]
 gi|170683008|ref|YP_001742371.1| flagellar basal body rod protein FlgC [Escherichia coli SMS-3-5]
 gi|188492955|ref|ZP_03000225.1| flagellar basal-body rod protein FlgC [Escherichia coli 53638]
 gi|260853464|ref|YP_003227355.1| putative lateral flagellar component of cell-proximal portion of
          basal-body rod [Escherichia coli O26:H11 str. 11368]
 gi|260866411|ref|YP_003232813.1| putative lateral flagellar component of cell-proximal portion of
          basal-body rod [Escherichia coli O111:H- str. 11128]
 gi|331645416|ref|ZP_08346520.1| flagellar basal-body rod protein FlgC [Escherichia coli M605]
 gi|331666544|ref|ZP_08367418.1| flagellar basal-body rod protein FlgC [Escherichia coli TA271]
 gi|331671802|ref|ZP_08372598.1| flagellar basal-body rod protein FlgC [Escherichia coli TA280]
 gi|169756290|gb|ACA78989.1| flagellar basal-body rod protein FlgC [Escherichia coli ATCC
          8739]
 gi|170520726|gb|ACB18904.1| lateral flagellar basal-body rod protein LfgC [Escherichia coli
          SMS-3-5]
 gi|188488154|gb|EDU63257.1| flagellar basal-body rod protein FlgC [Escherichia coli 53638]
 gi|257752113|dbj|BAI23615.1| predicted lateral flagellar component of cell-proximal portion of
          basal-body rod [Escherichia coli O26:H11 str. 11368]
 gi|257762767|dbj|BAI34262.1| predicted lateral flagellar component of cell-proximal portion of
          basal-body rod [Escherichia coli O111:H- str. 11128]
 gi|323158105|gb|EFZ44204.1| flagellar basal-body rod protein FlgC [Escherichia coli EPECa14]
 gi|323171061|gb|EFZ56710.1| flagellar basal-body rod protein FlgC [Escherichia coli LT-68]
 gi|323181545|gb|EFZ66965.1| flagellar basal-body rod protein FlgC [Escherichia coli 1357]
 gi|331045578|gb|EGI17704.1| flagellar basal-body rod protein FlgC [Escherichia coli M605]
 gi|331065768|gb|EGI37652.1| flagellar basal-body rod protein FlgC [Escherichia coli TA271]
 gi|331070791|gb|EGI42150.1| flagellar basal-body rod protein FlgC [Escherichia coli TA280]
          Length = 143

 Score = 39.5 bits (90), Expect = 0.47,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 6/45 (13%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVV 45
          I  +A  A   RL+TVA N++N +         ++     F+ V 
Sbjct: 9  ISGSAMTAQTLRLNTVASNLANANAPASSEAQAYKARSPVFAAVY 53



 Score = 38.3 bits (87), Expect = 1.0,   Method: Composition-based stats.
 Identities = 4/35 (11%), Positives = 15/35 (42%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            N + +M  M+  ++ F +   +++  +      +
Sbjct: 104 VNVVEQMADMMSASRDFETNVDVLNNVKSMQQSLL 138


>gi|124268257|ref|YP_001022261.1| flagellar basal body protein [Methylibium petroleiphilum PM1]
 gi|124261032|gb|ABM96026.1| flagellar basal body protein [Methylibium petroleiphilum PM1]
          Length = 150

 Score = 39.5 bits (90), Expect = 0.47,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 30/80 (37%), Gaps = 3/80 (3%)

Query: 1  MQT---SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS 57
          M     S N    A L   +R   +A N++N DT G++   + F   +           +
Sbjct: 18 MDRLTNSLNFQTQALLLRSERQRLIASNIANADTPGYQARDMDFGAALREATGAATPGNA 77

Query: 58 FVASGKEYLSKEVGSFISTG 77
            A+   +LS   G+    G
Sbjct: 78 LSATQAGHLSPTAGARSEAG 97


>gi|229017025|ref|ZP_04173945.1| Flagellar hook-associated protein FlgK [Bacillus cereus AH1273]
 gi|229023207|ref|ZP_04179718.1| Flagellar hook-associated protein FlgK [Bacillus cereus AH1272]
 gi|228738132|gb|EEL88617.1| Flagellar hook-associated protein FlgK [Bacillus cereus AH1272]
 gi|228744296|gb|EEL94378.1| Flagellar hook-associated protein FlgK [Bacillus cereus AH1273]
          Length = 432

 Score = 39.5 bits (90), Expect = 0.47,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 23/53 (43%)

Query: 6  NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
          N  L+  LA +  L T   N+SN  T G+    V    V  +  +   Q+I +
Sbjct: 7  NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQAVNLGSVGASNGHTPGQRIGY 59



 Score = 37.9 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 5/34 (14%), Positives = 11/34 (32%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
            N   EM  ++   + F + +  I    +     
Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427


>gi|309390123|gb|ADO78003.1| flagellar hook-associated protein FlgK [Halanaerobium praevalens
          DSM 2228]
          Length = 572

 Score = 39.5 bits (90), Expect = 0.47,   Method: Composition-based stats.
 Identities = 8/63 (12%), Positives = 18/63 (28%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
          +  ++GL A     + L     N++N +   +   +             +    S    G
Sbjct: 6  SGLSVGLRALETQRKSLDVTGHNIANANNEKYNKQRAVHKASYPYTAPGLSNNGSAGQMG 65

Query: 63 KEY 65
             
Sbjct: 66 TGV 68



 Score = 37.2 bits (84), Expect = 2.1,   Method: Composition-based stats.
 Identities = 6/38 (15%), Positives = 16/38 (42%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           S  +   EM  +I   Q + +    I++ ++ +   + 
Sbjct: 533 SGVSLDEEMANLIKYQQSYAAAAKYINKTDQLLETLMT 570


>gi|253990130|ref|YP_003041486.1| flagellar basal body rod protein FlgB [Photorhabdus asymbiotica
          subsp. asymbiotica ATCC 43949]
 gi|211639033|emb|CAR67647.1| flagellar basal-body rod protein flgb (putative proximal rod
          protein) [Photorhabdus asymbiotica subsp. asymbiotica
          ATCC 43949]
 gi|253781580|emb|CAQ84743.1| flagellar basal-body rod protein flgb (putative proximal rod
          protein) [Photorhabdus asymbiotica]
          Length = 137

 Score = 39.5 bits (90), Expect = 0.48,   Method: Composition-based stats.
 Identities = 8/69 (11%), Positives = 20/69 (28%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     +R   ++ N++N DT G++   + F+  +           + +           
Sbjct: 15 ALSLRSRRQEILSANIANADTPGYQARDIDFAAQLKKTIAHGRVTGNGIGLTLTSDRHIP 74

Query: 71 GSFISTGTE 79
                   
Sbjct: 75 IQPQKRMEM 83


>gi|149927795|ref|ZP_01916046.1| flagellar basal-body rod protein FlgB [Limnobacter sp. MED105]
 gi|149823417|gb|EDM82648.1| flagellar basal-body rod protein FlgB [Limnobacter sp. MED105]
          Length = 150

 Score = 39.5 bits (90), Expect = 0.48,   Method: Composition-based stats.
 Identities = 10/55 (18%), Positives = 19/55 (34%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
          +      A     +R   +  N+SN DT  ++ +   F   + A   +     S 
Sbjct: 8  AMQFSAEALKLRARRQEVLTSNISNVDTPNYKAVDFDFQSALKAATGEKGSMGSP 62


>gi|186477704|ref|YP_001859174.1| flagellar hook-associated protein FlgK [Burkholderia phymatum
          STM815]
 gi|184194163|gb|ACC72128.1| flagellar hook-associated protein FlgK [Burkholderia phymatum
          STM815]
          Length = 657

 Score = 39.5 bits (90), Expect = 0.48,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 26/68 (38%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62
            F+IGL+   A +  L+T   N+SN  T G+   +  ++E  G              + 
Sbjct: 4  NLFSIGLSGLNAAQWGLTTTGQNISNQATPGYSVERPVYAESSGQYTGSGYLGSGVSTTT 63

Query: 63 KEYLSKEV 70
           +    + 
Sbjct: 64 VQRQYSQY 71



 Score = 36.4 bits (82), Expect = 3.4,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 13/37 (35%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N   E   ++   Q + + + +I   +      +
Sbjct: 617 SGVNINEEAANLLQYQQLYQANSKVIQTAQTLFQTIL 653


>gi|33596137|ref|NP_883780.1| flagellar basal body rod protein FlgB [Bordetella parapertussis
          12822]
 gi|33601538|ref|NP_889098.1| flagellar basal body rod protein FlgB [Bordetella bronchiseptica
          RB50]
 gi|33573140|emb|CAE36787.1| flagellar basal-body rod protein FlgB [Bordetella parapertussis]
 gi|33575974|emb|CAE33053.1| flagellar basal-body rod protein FlgB [Bordetella bronchiseptica
          RB50]
          Length = 135

 Score = 39.5 bits (90), Expect = 0.48,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 15/41 (36%), Gaps = 2/41 (4%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51
          A  A   R   ++ N++N DT  ++     F   +      
Sbjct: 17 ALRAQ--RQEVLSSNIANADTPNYKARDFDFKAAMQGALEQ 55


>gi|289805731|ref|ZP_06536360.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Typhi str. AG3]
          Length = 71

 Score = 39.1 bits (89), Expect = 0.49,   Method: Composition-based stats.
 Identities = 9/52 (17%), Positives = 23/52 (44%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+TV++N++N +  G+       ++    +    
Sbjct: 1  MSSLINHAMSGLNAAQAALNTVSNNINNYNVAGYTRQTTILAQANSTLGAGG 52


>gi|256020226|ref|ZP_05434091.1| flagellar basal body rod protein FlgC [Shigella sp. D9]
 gi|300817272|ref|ZP_07097490.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 107-1]
 gi|307313521|ref|ZP_07593142.1| flagellar basal-body rod protein FlgC [Escherichia coli W]
 gi|332281388|ref|ZP_08393801.1| flagellar basal body rod protein FlgC [Shigella sp. D9]
 gi|300530248|gb|EFK51310.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 107-1]
 gi|306906689|gb|EFN37200.1| flagellar basal-body rod protein FlgC [Escherichia coli W]
 gi|315059540|gb|ADT73867.1| flagellar component of cell-proximal portion of basal-body rod
          [Escherichia coli W]
 gi|323379901|gb|ADX52169.1| flagellar basal-body rod protein FlgC [Escherichia coli KO11]
 gi|332103740|gb|EGJ07086.1| flagellar basal body rod protein FlgC [Shigella sp. D9]
          Length = 143

 Score = 39.1 bits (89), Expect = 0.49,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 6/45 (13%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVV 45
          I  +A  A   RL+TVA N++N +         ++     F+ V 
Sbjct: 9  ISGSAMTAQTLRLNTVASNLANANAPASSEAQAYKARSPVFAAVY 53



 Score = 38.3 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 4/35 (11%), Positives = 15/35 (42%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            N + +M  M+  ++ F +   +++  +      +
Sbjct: 104 VNVVEQMADMMSASRDFETNVDVLNNVKSMQQSLL 138


>gi|157371210|ref|YP_001479199.1| flagellar basal body rod protein FlgB [Serratia proteamaculans
          568]
 gi|157322974|gb|ABV42071.1| flagellar basal-body rod protein FlgB [Serratia proteamaculans
          568]
          Length = 137

 Score = 39.1 bits (89), Expect = 0.49,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 23/65 (35%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   +A N++N DT G++   + F+  +  +        S +A          
Sbjct: 15 ALNLRAQRQEILAANIANADTPGYQARDIDFAGQLNKVLEQGRVSGSGIALNMTSARHIP 74

Query: 71 GSFIS 75
             + 
Sbjct: 75 AQNMQ 79


>gi|90423518|ref|YP_531888.1| flagellar hook-associated protein [Rhodopseudomonas palustris
          BisB18]
 gi|90105532|gb|ABD87569.1| Flagellar hook-associated protein [Rhodopseudomonas palustris
          BisB18]
          Length = 618

 Score = 39.1 bits (89), Expect = 0.49,   Method: Composition-based stats.
 Identities = 9/37 (24%), Positives = 18/37 (48%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
          +F+  +A   A ++ +  V+ N+ N  T G+    V 
Sbjct: 5  AFSTAVAGLEAAQKAIRVVSQNVGNAGTAGYVRRTVT 41



 Score = 37.9 bits (86), Expect = 1.3,   Method: Composition-based stats.
 Identities = 4/32 (12%), Positives = 13/32 (40%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
            N   EM +++ L   + +   ++    + + 
Sbjct: 582 VNIDEEMSRLMSLQTAYAANARVLSAVREMLD 613


>gi|115523194|ref|YP_780105.1| flagellar hook-associated protein FlgK [Rhodopseudomonas palustris
           BisA53]
 gi|115517141|gb|ABJ05125.1| flagellar hook-associated protein FlgK [Rhodopseudomonas palustris
           BisA53]
          Length = 490

 Score = 39.1 bits (89), Expect = 0.49,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 20/40 (50%), Gaps = 3/40 (7%)

Query: 202 SNANSM---YEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           SN N +    EM  M+ + + F++ + LI   +  + E +
Sbjct: 447 SNVNGVNMEDEMSFMLQVERTFSASSKLIATVDAMLKELL 486


>gi|317406195|gb|EFV86444.1| flagellar hook-associated protein FlgK [Achromobacter
          xylosoxidans C54]
          Length = 558

 Score = 39.1 bits (89), Expect = 0.49,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 20/51 (39%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
             + + L    A +  L+T   N++N  TVG+   +V  S        + 
Sbjct: 1  MNLYKLALGGLNASQAGLATTGHNINNATTVGYNRQRVMISTAGAQATTNG 51


>gi|291277449|ref|YP_003517221.1| putative flagellar basal-body rod protein [Helicobacter mustelae
           12198]
 gi|290964643|emb|CBG40497.1| putative flagellar basal-body rod protein [Helicobacter mustelae
           12198]
          Length = 146

 Score = 39.1 bits (89), Expect = 0.49,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 25/85 (29%)

Query: 16  EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIS 75
             R   +A N++N DT  +R   + F   +   K  I      +       SK       
Sbjct: 24  SMRQDLIASNIANVDTPFYRPKDIDFEHYLAQEKARIFDNKPHLELEMAQTSKNHLKGGD 83

Query: 76  TGTELDFALEGDAWFALESPRGIIL 100
           T +        D   A      + L
Sbjct: 84  TQSYRPTTFFRDGHLARNDGNSVDL 108


>gi|261840252|gb|ACY00018.1| flagellar basal body rod protein FlgB [Helicobacter pylori 52]
          Length = 140

 Score = 39.1 bits (89), Expect = 0.50,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 18/35 (51%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          R   +A N++N DT  +R   + F  V+   K +I
Sbjct: 20 RQDMIASNIANVDTPFYRPKDLDFESVLAEKKAEI 54


>gi|254780091|ref|YP_003058198.1| flagellar basal body rod protein FlgB [Helicobacter pylori B38]
 gi|254002004|emb|CAX30263.1| Flagellar basal-body rod protein DlgB [Helicobacter pylori B38]
          Length = 140

 Score = 39.1 bits (89), Expect = 0.50,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 18/35 (51%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          R   +A N++N DT  +R   + F  V+   K +I
Sbjct: 20 RQDMIASNIANVDTPFYRPKDLDFESVLAEKKAEI 54


>gi|299068729|emb|CBJ39968.1| flagellar component of cell-proximal portion of basal-body rod,
           protein flgb [Ralstonia solanacearum CMR15]
          Length = 153

 Score = 39.1 bits (89), Expect = 0.50,   Method: Composition-based stats.
 Identities = 17/121 (14%), Positives = 34/121 (28%), Gaps = 3/121 (2%)

Query: 11  AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
           A     QR   +A N++N DT  ++     F   +             + +         
Sbjct: 15  ALRLRSQRHQLLASNIANADTPSYKARDFDFQSALQKATGQQSGNSLPMTATAAGHLTAA 74

Query: 71  GSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVP 130
           G+       +  +L   +            T     + + DG+ V   G+       +V 
Sbjct: 75  GAQAGDVVPMQASLSAQSQADPLQGEVQYRT---SQQPSIDGNTVDMDGERMRFADNTVR 131

Query: 131 I 131
            
Sbjct: 132 Y 132


>gi|32266906|ref|NP_860938.1| flagellar basal body rod protein FlgB [Helicobacter hepaticus
          ATCC 51449]
 gi|32262958|gb|AAP78004.1| flagellar basal body rod protein FlgB [Helicobacter hepaticus
          ATCC 51449]
          Length = 144

 Score = 39.1 bits (89), Expect = 0.51,   Method: Composition-based stats.
 Identities = 9/30 (30%), Positives = 15/30 (50%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGA 47
          R   +A N++N DT  +R   V F + +  
Sbjct: 23 RQDMIASNLANVDTPFYRPKDVNFEQYLSR 52


>gi|317011795|gb|ADU85542.1| flagellar basal body rod protein FlgB [Helicobacter pylori
          SouthAfrica7]
          Length = 140

 Score = 39.1 bits (89), Expect = 0.51,   Method: Composition-based stats.
 Identities = 9/29 (31%), Positives = 15/29 (51%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVG 46
          R   +A N++N DT  +R   + F  V+ 
Sbjct: 20 RQDMIASNIANVDTPFYRPKDLDFESVLA 48


>gi|261838847|gb|ACX98613.1| flagellar basal-body rod protein [Helicobacter pylori 51]
          Length = 140

 Score = 39.1 bits (89), Expect = 0.51,   Method: Composition-based stats.
 Identities = 9/29 (31%), Positives = 15/29 (51%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVG 46
          R   +A N++N DT  +R   + F  V+ 
Sbjct: 20 RQDMIASNIANVDTPFYRPKDLDFESVLA 48


>gi|242238975|ref|YP_002987156.1| flagellar hook-associated protein FlgK [Dickeya dadantii Ech703]
 gi|242131032|gb|ACS85334.1| flagellar hook-associated protein FlgK [Dickeya dadantii Ech703]
          Length = 551

 Score = 39.1 bits (89), Expect = 0.51,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK 49
             A +  LST ++N+SN+ T G+    V  ++  G  K
Sbjct: 12 GLKAAQVALSTTSNNISNSSTDGYNRQSVSLAQTSGTTK 50


>gi|171059415|ref|YP_001791764.1| flagellar basal-body rod protein FlgB [Leptothrix cholodnii SP-6]
 gi|170776860|gb|ACB34999.1| flagellar basal-body rod protein FlgB [Leptothrix cholodnii SP-6]
          Length = 134

 Score = 39.1 bits (89), Expect = 0.51,   Method: Composition-based stats.
 Identities = 11/73 (15%), Positives = 29/73 (39%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A +   +R   +A N++N +T G+    + F+  +     +     +   +   ++   V
Sbjct: 15 ALVLRSERQRLIASNIANAETPGYVARDLDFASALKQAVGEQSVGGALATTHGGHIPVAV 74

Query: 71 GSFISTGTELDFA 83
          G+  ++      A
Sbjct: 75 GARSASQLTYATA 87


>gi|5361014|gb|AAD42921.1|U12817_15 polar flagellar hook associated protein type 1 [Vibrio
          parahaemolyticus]
          Length = 658

 Score = 39.1 bits (89), Expect = 0.51,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 20/35 (57%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39
           N+G  + L  +++L+T   N+SN +T G+    V
Sbjct: 18 LNVGTQSVLTAQRQLNTTGHNISNVNTEGYSRQSV 52



 Score = 37.2 bits (84), Expect = 2.2,   Method: Composition-based stats.
 Identities = 4/36 (11%), Positives = 13/36 (36%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            N   E   M+   Q + + + ++     +    ++
Sbjct: 621 VNLDEEAANMMKFQQAYMASSRVMQAANDTFNTILQ 656


>gi|37525838|ref|NP_929182.1| flagellar basal body rod protein FlgB [Photorhabdus luminescens
          subsp. laumondii TTO1]
 gi|36785267|emb|CAE14208.1| Flagellar basal-body rod protein FlgB (Putative proximal rod
          protein) [Photorhabdus luminescens subsp. laumondii
          TTO1]
          Length = 137

 Score = 39.1 bits (89), Expect = 0.51,   Method: Composition-based stats.
 Identities = 8/69 (11%), Positives = 20/69 (28%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     +R   ++ N++N DT G++   + F+  +           + +           
Sbjct: 15 ALSLRSRRQEILSANIANADTPGYQARDIDFATQLKKTIAHGRVTGNGIGLTLTSDRHIP 74

Query: 71 GSFISTGTE 79
                   
Sbjct: 75 IQPQKRMEM 83


>gi|317013373|gb|ADU83981.1| flagellar basal body rod protein FlgB [Helicobacter pylori
          Lithuania75]
          Length = 140

 Score = 39.1 bits (89), Expect = 0.51,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 18/35 (51%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          R   +A N++N DT  +R   + F  V+   K +I
Sbjct: 20 RQDMIASNIANVDTPFYRPKDLDFESVLAEKKAEI 54


>gi|153840135|ref|ZP_01992802.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
          AQ3810]
 gi|149746243|gb|EDM57333.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
          AQ3810]
          Length = 430

 Score = 39.1 bits (89), Expect = 0.52,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 20/35 (57%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39
           N+G  + L  +++L+T   N+SN +T G+    V
Sbjct: 6  LNVGTQSVLTAQRQLNTTGHNISNVNTEGYSRQSV 40


>gi|331667482|ref|ZP_08368346.1| flagellar hook-associated protein 1 (HAP1) [Escherichia coli
          TA271]
 gi|331065067|gb|EGI36962.1| flagellar hook-associated protein 1 (HAP1) [Escherichia coli
          TA271]
          Length = 218

 Score = 39.1 bits (89), Expect = 0.52,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+T ++N+S+ +  G+       ++    +    
Sbjct: 1  MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|89056665|ref|YP_512116.1| flagellar hook-associated protein FlgK [Jannaschia sp. CCS1]
 gi|88866214|gb|ABD57091.1| flagellar hook-associated protein FlgK putative [Jannaschia sp.
          CCS1]
          Length = 487

 Score = 39.1 bits (89), Expect = 0.52,   Method: Composition-based stats.
 Identities = 7/32 (21%), Positives = 16/32 (50%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGF 34
          ++ +  L+   A  +    V+ N++N  T G+
Sbjct: 5  STLSSALSGLTASARAADIVSSNLANAMTEGY 36


>gi|86139478|ref|ZP_01058047.1| flagellar basal-body rod protein; FlgB [Roseobacter sp. MED193]
 gi|85823981|gb|EAQ44187.1| flagellar basal-body rod protein; FlgB [Roseobacter sp. MED193]
          Length = 137

 Score = 39.1 bits (89), Expect = 0.53,   Method: Composition-based stats.
 Identities = 20/123 (16%), Positives = 39/123 (31%), Gaps = 5/123 (4%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIKNDID----QKI 56
              F I  +      +R + V++N++N DT G+    +K F EV  A     D    +  
Sbjct: 14  LNVFKIAYSMASHAGKRQALVSENIANADTPGYHAKDIKPFKEVYAAGPRPGDMVASRGS 73

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVS 116
                    +   V +        D ++  +             +R      +    L +
Sbjct: 74  HLNGINGSNMDWAVTTSAVGTDPNDNSVSIETEILNGVEVKRQHSRALAIYKSSMNILRT 133

Query: 117 ASG 119
           + G
Sbjct: 134 SLG 136


>gi|332525069|ref|ZP_08401249.1| flagellar basal body protein [Rubrivivax benzoatilyticus JA2]
 gi|332108358|gb|EGJ09582.1| flagellar basal body protein [Rubrivivax benzoatilyticus JA2]
          Length = 150

 Score = 39.1 bits (89), Expect = 0.53,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 17/39 (43%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK 49
          A     +R   +A N++N DT G+      FS+ +    
Sbjct: 15 ALALRSERQRVIASNIANADTPGYVARDFDFSQALREAT 53


>gi|229918624|ref|YP_002887270.1| flagellar basal-body rod protein FlgB [Exiguobacterium sp. AT1b]
 gi|229470053|gb|ACQ71825.1| flagellar basal-body rod protein FlgB [Exiguobacterium sp. AT1b]
          Length = 122

 Score = 39.1 bits (89), Expect = 0.53,   Method: Composition-based stats.
 Identities = 11/66 (16%), Positives = 27/66 (40%), Gaps = 1/66 (1%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN-DIDQKISFVASGKEYLSKEVGSFIST 76
              ++ N+SN DT  F+  +  F + + +     +       ++  + + +  G+  S 
Sbjct: 21 NQKVISHNLSNIDTPNFKAKQAVFEQTLQSEMRLKLQGGRPSDSTQSKVIDRAGGAMRSD 80

Query: 77 GTELDF 82
          G  +D 
Sbjct: 81 GNNVDL 86


>gi|197120202|ref|YP_002140629.1| flagellar basal body rod protein FlgB [Geobacter bemidjiensis
          Bem]
 gi|197089562|gb|ACH40833.1| flagellar basal body rod protein FlgB [Geobacter bemidjiensis
          Bem]
          Length = 139

 Score = 39.1 bits (89), Expect = 0.54,   Method: Composition-based stats.
 Identities = 8/26 (30%), Positives = 15/26 (57%)

Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFS 42
          +R S +A N++N +T G+    + F 
Sbjct: 23 KRQSVIASNLANVETPGYTPSDLSFE 48


>gi|119477947|ref|ZP_01618047.1| flagellar hook-associated protein K [marine gamma proteobacterium
          HTCC2143]
 gi|119448860|gb|EAW30102.1| flagellar hook-associated protein K [marine gamma proteobacterium
          HTCC2143]
          Length = 676

 Score = 39.1 bits (89), Expect = 0.54,   Method: Composition-based stats.
 Identities = 9/53 (16%), Positives = 21/53 (39%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54
           +  N+G++A    ++ L    +N+SN     +   + + S     +     Q
Sbjct: 1  MSLLNVGISALTTNQKLLQVTGNNISNAGVESYSRQRAEVSTRPEQLLGGSYQ 53


>gi|34498343|ref|NP_902558.1| flagellar basal-body rod protein flgB [Chromobacterium violaceum
          ATCC 12472]
 gi|34104197|gb|AAQ60556.1| flagellar basal-body rod protein flgB [Chromobacterium violaceum
          ATCC 12472]
          Length = 137

 Score = 39.1 bits (89), Expect = 0.54,   Method: Composition-based stats.
 Identities = 8/54 (14%), Positives = 19/54 (35%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
          A      R   +  N++N +T  ++ +   F   + A  +   Q    +   + 
Sbjct: 15 ALNLQAYRAEVIGSNVANAETPYYKAVDFDFKSALQAQVDKQGQLGLALTDARH 68


>gi|68164549|gb|AAY87278.1| predicted flagellar proximal rod protein [uncultured bacterium
          BAC17H8]
          Length = 128

 Score = 39.1 bits (89), Expect = 0.55,   Method: Composition-based stats.
 Identities = 9/49 (18%), Positives = 20/49 (40%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
           N+   A     +R   +A N++N  T  F+   + F  ++   + +  
Sbjct: 8  LNLHATALTVRAKRNKILASNIANAATPNFKARDINFQALINKSEGEGP 56


>gi|28897559|ref|NP_797164.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
          RIMD 2210633]
 gi|260364617|ref|ZP_05777219.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
          K5030]
 gi|260878278|ref|ZP_05890633.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
          AN-5034]
 gi|260898108|ref|ZP_05906604.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
          Peru-466]
 gi|260901960|ref|ZP_05910355.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
          AQ4037]
 gi|28805771|dbj|BAC59048.1| polar flagellar hook associated protein type 1 FlgK [Vibrio
          parahaemolyticus RIMD 2210633]
 gi|308086131|gb|EFO35826.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
          Peru-466]
 gi|308090129|gb|EFO39824.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
          AN-5034]
 gi|308106763|gb|EFO44303.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
          AQ4037]
 gi|308115094|gb|EFO52634.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
          K5030]
 gi|328473447|gb|EGF44295.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
          10329]
          Length = 646

 Score = 39.1 bits (89), Expect = 0.55,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 20/35 (57%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39
           N+G  + L  +++L+T   N+SN +T G+    V
Sbjct: 6  LNVGTQSVLTAQRQLNTTGHNISNVNTEGYSRQSV 40



 Score = 37.2 bits (84), Expect = 2.3,   Method: Composition-based stats.
 Identities = 4/36 (11%), Positives = 13/36 (36%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            N   E   M+   Q + + + ++     +    ++
Sbjct: 609 VNLDEEAANMMKFQQAYMASSRVMQAANDTFNTILQ 644


>gi|308185346|ref|YP_003929479.1| flagellar basal body rod protein FlgB [Helicobacter pylori
          SJM180]
 gi|308061266|gb|ADO03162.1| flagellar basal body rod protein FlgB [Helicobacter pylori
          SJM180]
          Length = 140

 Score = 39.1 bits (89), Expect = 0.55,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 18/35 (51%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          R   +A N++N DT  +R   + F  V+   K +I
Sbjct: 20 RQDMIASNIANVDTPFYRPKDLDFESVLAEKKAEI 54


>gi|300938638|ref|ZP_07153367.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 21-1]
 gi|300456423|gb|EFK19916.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 21-1]
          Length = 138

 Score = 39.1 bits (89), Expect = 0.55,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 23/62 (37%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   +A N++N DT G++T  + F+  +  +        S VA          
Sbjct: 15 ALNLRAQRQEVLAANIANADTPGYQTRDIDFASELKKVMQRGRDATSVVALTMTSTQHIP 74

Query: 71 GS 72
            
Sbjct: 75 AQ 76


>gi|99082805|ref|YP_614959.1| flagellar basal body rod protein FlgB [Ruegeria sp. TM1040]
 gi|99039085|gb|ABF65697.1| Flagellar basal-body rod protein flgB [Ruegeria sp. TM1040]
          Length = 129

 Score = 39.1 bits (89), Expect = 0.55,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIKNDID 53
             FNI  +      +R + V++N++N DT G+    +K F EV  A +   D
Sbjct: 5  LNVFNIAYSMATHAGKRQALVSENIANADTPGYHAKDIKPFREVFAASEAQGD 57


>gi|253702511|ref|YP_003023700.1| flagellar basal-body rod protein FlgB [Geobacter sp. M21]
 gi|251777361|gb|ACT19942.1| flagellar basal-body rod protein FlgB [Geobacter sp. M21]
          Length = 139

 Score = 39.1 bits (89), Expect = 0.56,   Method: Composition-based stats.
 Identities = 8/26 (30%), Positives = 15/26 (57%)

Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFS 42
          +R S +A N++N +T G+    + F 
Sbjct: 23 KRQSVIASNLANVETPGYAPSDLSFE 48


>gi|312884836|ref|ZP_07744528.1| flagellar basal body rod protein FlgC [Vibrio caribbenthicus ATCC
          BAA-2122]
 gi|309367488|gb|EFP95048.1| flagellar basal body rod protein FlgC [Vibrio caribbenthicus ATCC
          BAA-2122]
          Length = 145

 Score = 39.1 bits (89), Expect = 0.57,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 6/75 (8%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          I  +A  A   RL+TVA N++N D V       ++ +K  F+ V    +  +       A
Sbjct: 9  IAGSAMNAQSVRLNTVASNLANADAVSANADDAYKALKPVFATVYNKTQLSVSDNAYPNA 68

Query: 61 SGKEYLSKEVGSFIS 75
            +     +      
Sbjct: 69 EVRIVDVVQSSKQAE 83



 Score = 39.1 bits (89), Expect = 0.59,   Method: Composition-based stats.
 Identities = 6/42 (14%), Positives = 18/42 (42%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   + + + EM  M+  T+ F +   ++   +      +
Sbjct: 97  GYVYYPDIDVVAEMADMMSATRSFETNVAVLGNVKSMQQGLL 138


>gi|303326603|ref|ZP_07357045.1| flagellar basal-body rod protein FlgB [Desulfovibrio sp.
          3_1_syn3]
 gi|302862591|gb|EFL85523.1| flagellar basal-body rod protein FlgB [Desulfovibrio sp.
          3_1_syn3]
          Length = 137

 Score = 39.1 bits (89), Expect = 0.57,   Method: Composition-based stats.
 Identities = 8/71 (11%), Positives = 22/71 (30%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
               QR + +  N++N +T  ++  ++ F + + +      +      S     +    
Sbjct: 16 MDMQLQRQNVITSNLANVETPNYKPRELAFEKELQSALGLDMKGRMSATSEGHMPAAFNP 75

Query: 72 SFISTGTELDF 82
                    F
Sbjct: 76 DNFGPEWSKQF 86


>gi|213621056|ref|ZP_03373839.1| flagellar hook-associated protein FlgK [Salmonella enterica
          subsp. enterica serovar Typhi str. E98-2068]
          Length = 78

 Score = 39.1 bits (89), Expect = 0.57,   Method: Composition-based stats.
 Identities = 9/52 (17%), Positives = 23/52 (44%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M +  N  ++   A +  L+TV++N++N +  G+       ++    +    
Sbjct: 1  MSSLINHAMSGLNAAQAALNTVSNNINNYNVAGYTRQTTILAQANSTLGAGG 52


>gi|107023946|ref|YP_622273.1| flagellar hook-associated protein FlgK [Burkholderia cenocepacia
          AU 1054]
 gi|116691033|ref|YP_836656.1| flagellar hook-associated protein FlgK [Burkholderia cenocepacia
          HI2424]
 gi|170734367|ref|YP_001766314.1| flagellar hook-associated protein FlgK [Burkholderia cenocepacia
          MC0-3]
 gi|105894135|gb|ABF77300.1| Flagellar hook-associated protein [Burkholderia cenocepacia AU
          1054]
 gi|116649122|gb|ABK09763.1| flagellar hook-associated protein FlgK [Burkholderia cenocepacia
          HI2424]
 gi|169817609|gb|ACA92192.1| flagellar hook-associated protein FlgK [Burkholderia cenocepacia
          MC0-3]
          Length = 643

 Score = 39.1 bits (89), Expect = 0.57,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 29/82 (35%), Gaps = 1/82 (1%)

Query: 1  MQTSF-NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFV 59
          M  S  N+G++   A    L+T   N+SN  T G+   +  ++E  G   +         
Sbjct: 1  MSNSLMNLGVSGLNAALWGLTTTGQNISNAATPGYSVERPVYAEASGQYTSSGYMPQGVN 60

Query: 60 ASGKEYLSKEVGSFISTGTELD 81
              +    +  S    G +  
Sbjct: 61 TVTVQRQYSQYLSDQLNGAQTQ 82



 Score = 36.4 bits (82), Expect = 3.7,   Method: Composition-based stats.
 Identities = 7/72 (9%), Positives = 19/72 (26%)

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
             +V    +  S     +  +      + +     S  N   E   ++   Q + +   +
Sbjct: 568 ANYVNGIGNTASQLKSSSAAQTALVGQITQAQQSVSGVNQNEEAANLMQYQQLYQANAKV 627

Query: 227 IDENEKSMLEAI 238
           I          +
Sbjct: 628 IQTASTLFQTVL 639


>gi|332531615|ref|ZP_08407512.1| flagellar basal-body rod protein FlgB [Hylemonella gracilis ATCC
          19624]
 gi|332038978|gb|EGI75407.1| flagellar basal-body rod protein FlgB [Hylemonella gracilis ATCC
          19624]
          Length = 161

 Score = 39.1 bits (89), Expect = 0.57,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 20/45 (44%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK 55
          A +   +R  T+A N++N DT G++     F   +       D K
Sbjct: 15 ALVLRSERQRTIASNIANGDTPGYQARDFDFKSAMQEALGQTDAK 59


>gi|239817168|ref|YP_002946078.1| flagellar basal-body rod protein FlgB [Variovorax paradoxus S110]
 gi|239803745|gb|ACS20812.1| flagellar basal-body rod protein FlgB [Variovorax paradoxus S110]
          Length = 136

 Score = 39.1 bits (89), Expect = 0.57,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 21/72 (29%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   +A N+++ DT  ++     F+  +             V           
Sbjct: 15 ALNLRTQRQEVLAANIAHADTPNYKARDFDFASRLTQAVEHGRAAQQPVQMAATSARHIQ 74

Query: 71 GSFISTGTELDF 82
              S+  E D 
Sbjct: 75 ADAPSSMPERDL 86


>gi|56695105|ref|YP_165452.1| flagellar basal body rod protein FlgB [Ruegeria pomeroyi DSS-3]
 gi|56676842|gb|AAV93508.1| flagellar basal-body rod protein; FlgB [Ruegeria pomeroyi DSS-3]
          Length = 138

 Score = 39.1 bits (89), Expect = 0.57,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 1/37 (2%)

Query: 17 QRLSTVADNMSNTDTVGFR-TIKVKFSEVVGAIKNDI 52
           R + +A NM+N DT G+R      F+E         
Sbjct: 29 TRQAVIAQNMANADTPGYRERDIAPFAETFARETAGT 65


>gi|75760642|ref|ZP_00740670.1| Flagellar hook-associated protein 1 [Bacillus thuringiensis
          serovar israelensis ATCC 35646]
 gi|74491856|gb|EAO55044.1| Flagellar hook-associated protein 1 [Bacillus thuringiensis
          serovar israelensis ATCC 35646]
          Length = 208

 Score = 39.1 bits (89), Expect = 0.58,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 25/53 (47%)

Query: 6  NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
          N  L+  LA +  L T   N+SN  T G+    V +  V  +  +  +Q+I +
Sbjct: 7  NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSVGASNGHTPEQRIGY 59


>gi|34557981|ref|NP_907796.1| flagellar basal body rod protein FlgB [Wolinella succinogenes DSM
          1740]
 gi|34483699|emb|CAE10696.1| FLAGELLAR BASAL-BODY ROD PROTEIN FLGB PROXIMAL ROD PROTEIN
          [Wolinella succinogenes]
          Length = 145

 Score = 39.1 bits (89), Expect = 0.58,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 20/54 (37%), Gaps = 7/54 (12%)

Query: 1  MQTSFNI-------GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA 47
          M  S             A      R   ++ N++N DT  +R   + F EV+ +
Sbjct: 1  MSESIYSYSQARELAYKALDYRSLRQDLISSNIANVDTPMYRPRDINFEEVLTS 54


>gi|255523707|ref|ZP_05390673.1| flagellar basal-body rod protein FlgB [Clostridium
          carboxidivorans P7]
 gi|296186711|ref|ZP_06855113.1| flagellar basal-body rod protein FlgB [Clostridium
          carboxidivorans P7]
 gi|255512576|gb|EET88850.1| flagellar basal-body rod protein FlgB [Clostridium
          carboxidivorans P7]
 gi|296048748|gb|EFG88180.1| flagellar basal-body rod protein FlgB [Clostridium
          carboxidivorans P7]
          Length = 133

 Score = 39.1 bits (89), Expect = 0.59,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 30/70 (42%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
             A  +R    ADN++N +T G++   V F E + +  +D+D K +     K   +   
Sbjct: 19 GLDASTERSKATADNIANINTKGYKRKYVTFEETLQSNMDDLDLKTTDDKHIKLQENYGQ 78

Query: 71 GSFISTGTEL 80
           +  +  +  
Sbjct: 79 INTKTDNSTS 88


>gi|327478807|gb|AEA82117.1| flagellar basal body rod protein FlgC [Pseudomonas stutzeri DSM
           4166]
          Length = 142

 Score = 39.1 bits (89), Expect = 0.60,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 20/43 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   + N + EM  M+  T+ F +   +++  +      +R
Sbjct: 96  GYVYYPDINEIEEMTDMMSATRSFETGVEVLNRVKSMQQSLLR 138



 Score = 37.2 bits (84), Expect = 2.3,   Method: Composition-based stats.
 Identities = 17/102 (16%), Positives = 32/102 (31%), Gaps = 7/102 (6%)

Query: 4   SFN-IGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56
           S   I  ++  A   RL+TVA N++NTD+        ++  K  F+ V           +
Sbjct: 5   SIYRIAGSSMNAQTVRLNTVASNLANTDSAAANPADVYQARKPMFAAVYENNSLTRGVGL 64

Query: 57  SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98
                    +              +   +G+ +        I
Sbjct: 65  GGAHVQVLDVVTSGAEPKRRYEPGNPLADGEGYVYYPDINEI 106


>gi|317014994|gb|ADU82430.1| flagellar basal body rod protein FlgB [Helicobacter pylori
          Gambia94/24]
          Length = 140

 Score = 39.1 bits (89), Expect = 0.60,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 18/35 (51%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          R   +A N++N DT  +R   + F  V+   K +I
Sbjct: 20 RQDMIASNIANVDTPFYRPKDLDFESVLAEKKAEI 54


>gi|225620569|ref|YP_002721826.1| flagellar hook-associated protein FlgK [Brachyspira hyodysenteriae
           WA1]
 gi|225215388|gb|ACN84122.1| flagellar hook-associated protein FlgK [Brachyspira hyodysenteriae
           WA1]
          Length = 672

 Score = 39.1 bits (89), Expect = 0.60,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 24/72 (33%), Gaps = 5/72 (6%)

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLED-----SNANSMYEMGQMIHLTQKFNSITTLIDEN 230
               +   T   +    TV   +LE      S  N   E+ QM      +N+   ++   
Sbjct: 600 AKIASRTETANAETEKQTVVMEYLEKLRQSVSGVNLDEEVAQMAMYQHGYNASARVVSVM 659

Query: 231 EKSMLEAIRNIA 242
           ++ +   I  + 
Sbjct: 660 DQLLDVVINRMG 671


>gi|220913741|ref|YP_002489050.1| flagellar hook-associated protein FlgK [Arthrobacter
          chlorophenolicus A6]
 gi|219860619|gb|ACL40961.1| flagellar hook-associated protein FlgK [Arthrobacter
          chlorophenolicus A6]
          Length = 472

 Score = 39.1 bits (89), Expect = 0.60,   Method: Composition-based stats.
 Identities = 8/53 (15%), Positives = 19/53 (35%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56
            N       A  Q ++    N++N  T G+   +++ S +     + +    
Sbjct: 6  GLNTAFLGLTAARQGINLAGQNIANAGTEGYTRQRIEQSPIGAPSASGLTAPG 58



 Score = 35.2 bits (79), Expect = 8.3,   Method: Composition-based stats.
 Identities = 2/39 (5%), Positives = 13/39 (33%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            +   E   ++     + +   ++   ++++   I    
Sbjct: 430 VSLDEENISLLTNQHAYQAAARVMTAVDEALDVLINRTG 468


>gi|114570488|ref|YP_757168.1| flagellar basal-body rod protein FlgB [Maricaulis maris MCS10]
 gi|114340950|gb|ABI66230.1| flagellar basal-body rod protein FlgB [Maricaulis maris MCS10]
          Length = 150

 Score = 39.1 bits (89), Expect = 0.60,   Method: Composition-based stats.
 Identities = 6/24 (25%), Positives = 13/24 (54%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGF 34
          +      R   +A+N++N +T G+
Sbjct: 15 SMSFHSDRQQVIAENIANANTPGY 38


>gi|90422607|ref|YP_530977.1| flagellar basal body rod protein FlgB [Rhodopseudomonas palustris
          BisB18]
 gi|90104621|gb|ABD86658.1| flagellar basal body rod protein [Rhodopseudomonas palustris
          BisB18]
          Length = 125

 Score = 39.1 bits (89), Expect = 0.60,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 26/42 (61%), Gaps = 1/42 (2%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-FSEVV 45
          F++  +    L  R +T++ N++N +T G++   ++ FS+++
Sbjct: 7  FDVASSQAQWLSLRQATISSNVANANTPGYQAKDIESFSKLL 48


>gi|260429026|ref|ZP_05783003.1| flagellar hook-associated protein FlgK [Citreicella sp. SE45]
 gi|260419649|gb|EEX12902.1| flagellar hook-associated protein FlgK [Citreicella sp. SE45]
          Length = 485

 Score = 39.1 bits (89), Expect = 0.60,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 199 LEDSN-ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           LE S   ++  E+ +M+ + Q + +   +I   ++ M   + 
Sbjct: 443 LELSAGVDTDAELQEMLRIEQHYAANARVITTVDELMQTLLS 484



 Score = 36.0 bits (81), Expect = 4.5,   Method: Composition-based stats.
 Identities = 8/28 (28%), Positives = 14/28 (50%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDT 31
          + +  L+   A  +  S VA N++N  T
Sbjct: 6  ALSNALSGLTANSRAASLVASNIANATT 33


>gi|90418394|ref|ZP_01226306.1| putative flagellar basal-body rod protein FlgB [Aurantimonas
          manganoxydans SI85-9A1]
 gi|90338066|gb|EAS51717.1| putative flagellar basal-body rod protein FlgB [Aurantimonas
          manganoxydans SI85-9A1]
          Length = 126

 Score = 39.1 bits (89), Expect = 0.60,   Method: Composition-based stats.
 Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 5/53 (9%)

Query: 1  MQTSFNI-GLAAQLA--LEQRLSTVADNMSNTDTVGF-RTIKVKFSEVVGAIK 49
          M  S  I GLA+Q    L QR + VA+N++N DT G+       F+E + A  
Sbjct: 1  MD-SLYIFGLASQRTAYLAQRQTVVAENVANVDTPGYTSKDLSSFTEALDATA 52


>gi|291278934|ref|YP_003495769.1| flagellar basal-body rod protein FlgB [Deferribacter
          desulfuricans SSM1]
 gi|290753636|dbj|BAI80013.1| flagellar basal-body rod protein FlgB [Deferribacter
          desulfuricans SSM1]
          Length = 134

 Score = 39.1 bits (89), Expect = 0.61,   Method: Composition-based stats.
 Identities = 8/61 (13%), Positives = 23/61 (37%)

Query: 21 TVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTEL 80
           +++N++N DT  ++  K+ F + +  +     +    V +            +S   + 
Sbjct: 25 VISENIANVDTPFYKAKKLDFKDAMQDVMGTGKKLPLKVTNKYHISGSSENFSVSNYVKY 84

Query: 81 D 81
           
Sbjct: 85 Q 85


>gi|283834449|ref|ZP_06354190.1| flagellar hook-associated protein FlgK [Citrobacter youngae ATCC
          29220]
 gi|291069996|gb|EFE08105.1| flagellar hook-associated protein FlgK [Citrobacter youngae ATCC
          29220]
          Length = 458

 Score = 39.1 bits (89), Expect = 0.61,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 22/78 (28%), Gaps = 2/78 (2%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M    NIG +     +  L+  A N +N  T G+       +  +GA     +   + V 
Sbjct: 1  MD-MINIGYSGASTAQVELNVTAQNTANAMTDGYTRQVAI-TSTIGASSGSANSAGNGVQ 58

Query: 61 SGKEYLSKEVGSFISTGT 78
                            
Sbjct: 59 VDSIRRVSNQYQVNQVWY 76


>gi|227815505|ref|YP_002815514.1| flagellar hook-associated protein FlgK [Bacillus anthracis str. CDC
           684]
 gi|227007204|gb|ACP16947.1| flagellar hook-associated protein FlgK [Bacillus anthracis str. CDC
           684]
          Length = 202

 Score = 39.1 bits (89), Expect = 0.61,   Method: Composition-based stats.
 Identities = 5/34 (14%), Positives = 11/34 (32%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
            N   EM  ++   + F + +  I    +     
Sbjct: 164 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 197


>gi|2105145|gb|AAB57896.1| FlgB [Treponema denticola]
          Length = 139

 Score = 39.1 bits (89), Expect = 0.61,   Method: Composition-based stats.
 Identities = 8/74 (10%), Positives = 22/74 (29%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A      R +  ++N++N+D   F+  +V F   +    +              +     
Sbjct: 16 ALDVNSLRYTVTSNNLANSDVPNFKRTEVNFESELKRAFDSEKNAKGAFQLATTHPLHIK 75

Query: 71 GSFISTGTELDFAL 84
           +       +   +
Sbjct: 76 SNEPIDYKTVSLCV 89


>gi|323191536|gb|EFZ76797.1| flagellar basal-body rod protein FlgC [Escherichia coli RN587/1]
          Length = 143

 Score = 39.1 bits (89), Expect = 0.62,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 6/45 (13%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVV 45
          I  +A  A   RL+TVA N++N +         ++     F+ V 
Sbjct: 9  ISGSAMTAQTLRLNTVASNLANANAPASSEAQAYKARSPVFAAVY 53



 Score = 37.9 bits (86), Expect = 1.3,   Method: Composition-based stats.
 Identities = 4/35 (11%), Positives = 15/35 (42%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            N + +M  M+  ++ F +   +++  +      +
Sbjct: 104 VNVVEQMADMMSASRDFETNVDVLNNVKSMQQSLL 138


>gi|290474969|ref|YP_003467853.1| flagellar basal body rod cell-proximal protein [Xenorhabdus
          bovienii SS-2004]
 gi|289174286|emb|CBJ81076.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
          [Xenorhabdus bovienii SS-2004]
          Length = 138

 Score = 39.1 bits (89), Expect = 0.62,   Method: Composition-based stats.
 Identities = 8/60 (13%), Positives = 22/60 (36%)

Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76
          QR   ++ N++N DT G++   + F+  +  +  +     + +               + 
Sbjct: 21 QRQEILSANIANADTPGYQARDIDFAAQLKQVMAEGRVTGNGMKLRLASDRHIPAQSQNR 80


>gi|149188072|ref|ZP_01866367.1| flagellar hook-associated protein K [Vibrio shilonii AK1]
 gi|148838060|gb|EDL55002.1| flagellar hook-associated protein K [Vibrio shilonii AK1]
          Length = 622

 Score = 39.1 bits (89), Expect = 0.62,   Method: Composition-based stats.
 Identities = 13/76 (17%), Positives = 25/76 (32%), Gaps = 1/76 (1%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
           N+G  + L  +++L+T   N+SN +T G+    V         +         V     
Sbjct: 6  LNLGAQSVLTAQRQLNTTGHNISNANTEGYSRQSVI-QGTNTPRQFGGQTYGMGVHVENV 64

Query: 65 YLSKEVGSFISTGTEL 80
            S +  +        
Sbjct: 65 RRSWDQFAVKELNMAT 80



 Score = 38.7 bits (88), Expect = 0.76,   Method: Composition-based stats.
 Identities = 5/38 (13%), Positives = 15/38 (39%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           S  N   E   M+   Q + + + ++    ++    ++
Sbjct: 583 SGVNLDEEAANMMKFQQAYMASSRVMQAANETFDTILQ 620


>gi|24213047|ref|NP_710528.1| flagellar basal body rod protein FlgB [Leptospira interrogans
          serovar Lai str. 56601]
 gi|45656203|ref|YP_000289.1| flagellar basal body rod protein FlgB [Leptospira interrogans
          serovar Copenhageni str. Fiocruz L1-130]
 gi|24193738|gb|AAN47546.1| flagellar basal body rod protein FlgB [Leptospira interrogans
          serovar Lai str. 56601]
 gi|45599437|gb|AAS68926.1| flagellar basal-body rod protein [Leptospira interrogans serovar
          Copenhageni str. Fiocruz L1-130]
          Length = 143

 Score = 39.1 bits (89), Expect = 0.62,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 16/41 (39%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51
                 +   ++DN++N D   F+  +V F  ++      
Sbjct: 17 GMNNSIFKRKVISDNIANADVPHFKRSEVIFESMIKRAIES 57


>gi|17548563|ref|NP_521903.1| flagellar basal-body rod protein FlgB [Ralstonia solanacearum
           GMI1000]
 gi|17430811|emb|CAD17493.1| probable flagellar basal-body rod protein flgb [Ralstonia
           solanacearum GMI1000]
          Length = 165

 Score = 39.1 bits (89), Expect = 0.62,   Method: Composition-based stats.
 Identities = 17/121 (14%), Positives = 34/121 (28%), Gaps = 3/121 (2%)

Query: 11  AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
           A     QR   +A N++N DT  ++     F   +             + +         
Sbjct: 27  ALRLRSQRHQLLASNIANADTPSYKARDFDFQSALQKAAGQQSGNSLPMTATAAGHLTAA 86

Query: 71  GSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVP 130
           G+       +  +L   +            T     + + DG+ V   G+       +V 
Sbjct: 87  GAPAGDVVPMQASLSAQSKADPLQGEVQYRT---SQQPSIDGNTVDMDGERMRFADNTVR 143

Query: 131 I 131
            
Sbjct: 144 Y 144


>gi|117919769|ref|YP_868961.1| flagellar basal body rod protein FlgB [Shewanella sp. ANA-3]
 gi|117612101|gb|ABK47555.1| flagellar basal-body rod protein FlgB [Shewanella sp. ANA-3]
          Length = 134

 Score = 39.1 bits (89), Expect = 0.62,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 22/50 (44%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLS 67
          R   ++ N++N DT  ++   V FS  +   K    Q+ S   +G E   
Sbjct: 22 RAEVISSNIANADTPHYKARDVDFSAALNIAKTQQQQRNSLEMTGDEQHF 71


>gi|218703523|ref|YP_002411042.1| flagellar basal body rod protein FlgC [Escherichia coli UMN026]
 gi|293403353|ref|ZP_06647444.1| flgC [Escherichia coli FVEC1412]
 gi|298378965|ref|ZP_06988846.1| flagellar basal-body rod protein FlgC [Escherichia coli FVEC1302]
 gi|300900363|ref|ZP_07118538.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 198-1]
 gi|218430620|emb|CAR11486.1| putative Flagellar basal-body rod protein flgC ( proximal rod
          protein) [Escherichia coli UMN026]
 gi|291429206|gb|EFF02226.1| flgC [Escherichia coli FVEC1412]
 gi|298280078|gb|EFI21582.1| flagellar basal-body rod protein FlgC [Escherichia coli FVEC1302]
 gi|300356119|gb|EFJ71989.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 198-1]
          Length = 143

 Score = 38.7 bits (88), Expect = 0.63,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 6/45 (13%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVV 45
          I  +A  A   RL+TVA N++N +         ++     F+ V 
Sbjct: 9  ISGSAMTAQTIRLNTVASNLANANAPAGSEAQAYKARSPVFAAVY 53



 Score = 38.3 bits (87), Expect = 1.0,   Method: Composition-based stats.
 Identities = 4/35 (11%), Positives = 15/35 (42%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            N + +M  M+  ++ F +   +++  +      +
Sbjct: 104 VNVVEQMADMMSASRDFETNVDVLNNVKSMQQSLL 138


>gi|163758012|ref|ZP_02165100.1| flagellar basal-body rod protein B [Hoeflea phototrophica DFL-43]
 gi|162284301|gb|EDQ34584.1| flagellar basal-body rod protein B [Hoeflea phototrophica DFL-43]
          Length = 125

 Score = 38.7 bits (88), Expect = 0.63,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 1/42 (2%)

Query: 18 RLSTVADNMSNTDTVGFR-TIKVKFSEVVGAIKNDIDQKISF 58
          R S VA N++N +T G+       F  V+      +      
Sbjct: 20 RQSVVAGNIANVNTPGYTAREVAAFEAVMQETGTRMAATHPG 61


>gi|283784090|ref|YP_003363955.1| lateral flagellar hook associated protein 1 [Citrobacter
          rodentium ICC168]
 gi|282947544|emb|CBG87097.1| lateral flagellar hook associated protein 1 [Citrobacter
          rodentium ICC168]
          Length = 455

 Score = 38.7 bits (88), Expect = 0.63,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 24/85 (28%), Gaps = 1/85 (1%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M    NIG +     +  L+  A N +N  T G+       S +  +  +          
Sbjct: 1  MD-MINIGYSGASTAQVELNVTAQNTANAMTDGYTRQVAVVSSIGASAGSPNSAGNGVQV 59

Query: 61 SGKEYLSKEVGSFISTGTELDFALE 85
               +S +           D+   
Sbjct: 60 DSIRRVSNQYQVNQVWYAASDYGYY 84


>gi|82702450|ref|YP_412016.1| flagellar basal-body rod protein FlgB [Nitrosospira multiformis
          ATCC 25196]
 gi|82410515|gb|ABB74624.1| flagellar basal-body rod protein FlgB [Nitrosospira multiformis
          ATCC 25196]
          Length = 134

 Score = 38.7 bits (88), Expect = 0.64,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 17/41 (41%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51
          A      R   +A N++N DT  ++   + F + + +    
Sbjct: 15 AANLRAHRQQLIASNIANADTPQYKARDINFKDAMESALTG 55


>gi|254230134|ref|ZP_04923529.1| flagellar hook-associated protein FlgK [Vibrio sp. Ex25]
 gi|151937327|gb|EDN56190.1| flagellar hook-associated protein FlgK [Vibrio sp. Ex25]
          Length = 660

 Score = 38.7 bits (88), Expect = 0.65,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 20/35 (57%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39
           N+G  + L  +++L+T   N+SN +T G+    V
Sbjct: 20 LNVGTQSVLTAQRQLNTTGHNISNVNTEGYSRQSV 54



 Score = 38.3 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 5/38 (13%), Positives = 14/38 (36%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           S  N   E   M+   Q + + + ++     +    ++
Sbjct: 621 SGVNLDEEAANMMKFQQAYMASSRVMQAANDTFNTILQ 658


>gi|157376219|ref|YP_001474819.1| flagellar basal body rod protein FlgB [Shewanella sediminis
          HAW-EB3]
 gi|157318593|gb|ABV37691.1| flagellar basal-body rod protein FlgB [Shewanella sediminis
          HAW-EB3]
          Length = 132

 Score = 38.7 bits (88), Expect = 0.65,   Method: Composition-based stats.
 Identities = 9/61 (14%), Positives = 24/61 (39%)

Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIS 75
           QR   ++ N++N DT  ++   + F + + A  +  +      +  K +    +    +
Sbjct: 20 SQRAQVISSNIANADTPHYKARDLDFDKAMQAATSRQNGLSMSRSDVKHFDLTALSGQNT 79

Query: 76 T 76
           
Sbjct: 80 A 80


>gi|213419605|ref|ZP_03352671.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp.
           enterica serovar Typhi str. E01-6750]
          Length = 29

 Score = 38.7 bits (88), Expect = 0.66,   Method: Composition-based stats.
 Identities = 2/28 (7%), Positives = 12/28 (42%)

Query: 212 QMIHLTQKFNSITTLIDENEKSMLEAIR 239
            MI + + +   +  +   ++ + +  +
Sbjct: 1   NMIQVQRAYEINSKAVSTTDQMLQKLTQ 28


>gi|91225879|ref|ZP_01260848.1| flagellar hook-associated protein K [Vibrio alginolyticus 12G01]
 gi|91189529|gb|EAS75805.1| flagellar hook-associated protein K [Vibrio alginolyticus 12G01]
          Length = 646

 Score = 38.7 bits (88), Expect = 0.66,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 20/35 (57%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39
           N+G  + L  +++L+T   N+SN +T G+    V
Sbjct: 6  LNVGTQSVLTAQRQLNTTGHNISNVNTEGYSRQSV 40



 Score = 38.3 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 5/38 (13%), Positives = 14/38 (36%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           S  N   E   M+   Q + + + ++     +    ++
Sbjct: 607 SGVNLDEEAANMMKFQQAYMASSRVMQAANDTFNTILQ 644


>gi|257471392|ref|ZP_05635391.1| flagellar basal-body rod protein FlgB [Buchnera aphidicola str.
          LSR1 (Acyrthosiphon pisum)]
 gi|11386804|sp|P57419|FLGB_BUCAI RecName: Full=Flagellar basal-body rod protein flgB
 gi|311086075|gb|ADP66157.1| flagellar basal-body rod protein FlgB [Buchnera aphidicola str.
          LL01 (Acyrthosiphon pisum)]
 gi|311086646|gb|ADP66727.1| flagellar basal-body rod protein FlgB [Buchnera aphidicola str.
          TLW03 (Acyrthosiphon pisum)]
 gi|311087232|gb|ADP67312.1| flagellar basal-body rod protein FlgB [Buchnera aphidicola str.
          JF99 (Acyrthosiphon pisum)]
 gi|311087751|gb|ADP67830.1| flagellar basal-body rod protein FlgB [Buchnera aphidicola str.
          JF98 (Acyrthosiphon pisum)]
          Length = 133

 Score = 38.7 bits (88), Expect = 0.66,   Method: Composition-based stats.
 Identities = 10/32 (31%), Positives = 17/32 (53%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFS 42
          A     QR   ++ N++N DT G+++I   F 
Sbjct: 15 ALNLCSQRQEILSANIANADTPGYKSIDFNFK 46


>gi|328545572|ref|YP_004305681.1| flagellar hook-associated protein [polymorphum gilvum
          SL003B-26A1]
 gi|326415313|gb|ADZ72376.1| Flagellar hook-associated protein [Polymorphum gilvum
          SL003B-26A1]
          Length = 459

 Score = 38.7 bits (88), Expect = 0.66,   Method: Composition-based stats.
 Identities = 9/34 (26%), Positives = 18/34 (52%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
          I  ++  + + +LS  A+N++N DT G+      
Sbjct: 10 IATSSLASTQVQLSIAANNVANADTEGYTRKTAS 43


>gi|329402361|gb|AEB91479.1| hook-associated protein 1 [Helicobacter pylori SS1]
          Length = 606

 Score = 38.7 bits (88), Expect = 0.67,   Method: Composition-based stats.
 Identities = 6/29 (20%), Positives = 11/29 (37%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTD 30
           +S N       A +  +    +N+SN  
Sbjct: 5  LSSLNTSYTGLQAHQSMVDVTGNNISNAS 33



 Score = 38.7 bits (88), Expect = 0.67,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 14/37 (37%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  +   EM  +I     + +   +I   ++ +   +
Sbjct: 566 SQVSVDEEMLNLIKFQSGYAANAKVITAIDRMIDTFL 602


>gi|294500942|ref|YP_003564642.1| flagellar basal-body rod protein FlgB [Bacillus megaterium QM
           B1551]
 gi|294350879|gb|ADE71208.1| flagellar basal-body rod protein FlgB [Bacillus megaterium QM
           B1551]
          Length = 129

 Score = 38.7 bits (88), Expect = 0.67,   Method: Composition-based stats.
 Identities = 12/95 (12%), Positives = 29/95 (30%), Gaps = 4/95 (4%)

Query: 10  AAQLALEQRLSTVADNMSNTDTVGFRTIKV----KFSEVVGAIKNDIDQKISFVASGKEY 65
                  Q+  T+A N++N DT  +++  V    +F +++             +      
Sbjct: 13  NGISYASQKQQTIAQNIANVDTPNYKSKTVSRTSEFRDLLHNELEAYQTDSKHIPFSDSS 72

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALESPRGIIL 100
                    ++       ++ D   A  +   I  
Sbjct: 73  QRAITQQGNTSYQANGNNVDMDKEMADMAENQIYY 107


>gi|149189833|ref|ZP_01868113.1| flagellar basal-body rod protein B [Vibrio shilonii AK1]
 gi|148836319|gb|EDL53276.1| flagellar basal-body rod protein B [Vibrio shilonii AK1]
          Length = 120

 Score = 38.7 bits (88), Expect = 0.67,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 26/85 (30%), Gaps = 1/85 (1%)

Query: 17  QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76
           QR   +A N++N DT G+    + F+ V+    N                          
Sbjct: 21  QRTKVLASNLANVDTPGYLAKDLSFTTVMKQ-ANPNGVHTPTPKLDIATQYSVPYQNSKD 79

Query: 77  GTELDFALEGDAWFALESPRGIILT 101
           G  ++  +E   +          LT
Sbjct: 80  GNTVELGVEQAKFTQNNMDFQTSLT 104


>gi|115522799|ref|YP_779710.1| flagellar hook-associated protein FlgK [Rhodopseudomonas
          palustris BisA53]
 gi|115516746|gb|ABJ04730.1| flagellar hook-associated protein FlgK [Rhodopseudomonas
          palustris BisA53]
          Length = 589

 Score = 38.7 bits (88), Expect = 0.67,   Method: Composition-based stats.
 Identities = 8/28 (28%), Positives = 18/28 (64%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTVGF 34
          I +++ +  + ++S  + N+SN DT G+
Sbjct: 9  IAVSSLMVTQVQISVTSSNISNADTTGY 36


>gi|313650476|gb|EFS14883.1| flagellar basal-body rod protein flgC [Shigella flexneri 2a str.
          2457T]
 gi|332758232|gb|EGJ88555.1| flagellar basal-body rod protein flgC [Shigella flexneri 4343-70]
 gi|332759647|gb|EGJ89952.1| flagellar basal-body rod protein flgC [Shigella flexneri 2747-71]
 gi|332761418|gb|EGJ91702.1| flagellar basal-body rod protein flgC [Shigella flexneri K-671]
 gi|332767680|gb|EGJ97873.1| flagella basal body rod family protein [Shigella flexneri
          2930-71]
 gi|333004882|gb|EGK24402.1| flagellar basal-body rod protein flgC [Shigella flexneri VA-6]
 gi|333005639|gb|EGK25157.1| flagellar basal-body rod protein flgC [Shigella flexneri K-218]
 gi|333019455|gb|EGK38738.1| flagellar basal-body rod protein flgC [Shigella flexneri K-304]
 gi|333019765|gb|EGK39037.1| flagellar basal-body rod protein flgC [Shigella flexneri K-227]
          Length = 90

 Score = 38.7 bits (88), Expect = 0.67,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 28/77 (36%), Gaps = 6/77 (7%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSEVVGAIKNDIDQK 55
             F+I  +A  A  QRL+  A N++N     G     +R  +V F             K
Sbjct: 4  LNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRAKQVVFQVNAAPGAATGGVK 63

Query: 56 ISFVASGKEYLSKEVGS 72
          ++ V   +   +  +  
Sbjct: 64 VADVKKVRPRTNWFMNQ 80


>gi|299822281|ref|ZP_07054167.1| flagellar hook-associated protein FlgK [Listeria grayi DSM 20601]
 gi|299815810|gb|EFI83048.1| flagellar hook-associated protein FlgK [Listeria grayi DSM 20601]
          Length = 509

 Score = 38.7 bits (88), Expect = 0.67,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 17/41 (41%)

Query: 6  NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46
          N+ L+   A +        N+SN +T G+    V    + G
Sbjct: 7  NVSLSGMNAAQIATMVAQQNISNINTAGYVRQNVNQQALYG 47



 Score = 36.0 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 4/36 (11%), Positives = 11/36 (30%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            N   EM  ++     + + T  ++         + 
Sbjct: 472 VNIDEEMTNIMQYQSYYVANTKAMNIVNDMFQSLLN 507


>gi|317012896|gb|ADU83504.1| flagellar hook-associated protein FlgK [Helicobacter pylori
          Lithuania75]
          Length = 606

 Score = 38.7 bits (88), Expect = 0.68,   Method: Composition-based stats.
 Identities = 6/29 (20%), Positives = 11/29 (37%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTD 30
           +S N       A +  +    +N+SN  
Sbjct: 5  LSSLNTSYTGLQAHQSMVDVTGNNISNAS 33



 Score = 38.7 bits (88), Expect = 0.72,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 14/37 (37%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  +   EM  +I     + +   +I   ++ +   +
Sbjct: 566 SQVSVDEEMLNLIKFQSGYAANAKVITAIDRMIDALL 602


>gi|228958018|ref|ZP_04119754.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|228801643|gb|EEM48524.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis
           serovar pakistani str. T13001]
          Length = 432

 Score = 38.7 bits (88), Expect = 0.68,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 32/101 (31%), Gaps = 6/101 (5%)

Query: 6   NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65
           N  L+  LA +  L T   N+SN  T G+    V +    G  K    ++          
Sbjct: 7   NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSA-GGSKGYAPEQRIGYGVQTLG 65

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106
           + +      +         +  + F+  +     L+R    
Sbjct: 66  VDRITDEVKTKQYN-----DQMSQFSYYAYMNSTLSRVESM 101



 Score = 38.3 bits (87), Expect = 1.0,   Method: Composition-based stats.
 Identities = 5/34 (14%), Positives = 11/34 (32%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
            N   EM  ++   + F + +  I    +     
Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427


>gi|229189840|ref|ZP_04316851.1| Flagellar basal-body rod protein [Bacillus cereus ATCC 10876]
 gi|228593648|gb|EEK51456.1| Flagellar basal-body rod protein [Bacillus cereus ATCC 10876]
          Length = 147

 Score = 38.7 bits (88), Expect = 0.68,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 29/72 (40%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
             L  + +TV+ N++N +T G++   V F+E +           + + S  +       
Sbjct: 24 MNYLVTKRNTVSSNIANGNTPGYKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNKM 83

Query: 72 SFISTGTELDFA 83
             +  T+  +A
Sbjct: 84 HLPTVNTKNTYA 95


>gi|90418364|ref|ZP_01226276.1| putative flagellar hook-associated protein FlgK [Aurantimonas
           manganoxydans SI85-9A1]
 gi|90338036|gb|EAS51687.1| putative flagellar hook-associated protein FlgK [Aurantimonas
           manganoxydans SI85-9A1]
          Length = 499

 Score = 38.7 bits (88), Expect = 0.68,   Method: Composition-based stats.
 Identities = 6/35 (17%), Positives = 16/35 (45%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            N   EM +++ L + + + + LI    + +   +
Sbjct: 462 INIDDEMTRLLDLERSYQASSKLISTVGQMIDSLL 496


>gi|332704840|ref|ZP_08424928.1| flagellar basal body rod protein [Desulfovibrio africanus str.
          Walvis Bay]
 gi|332554989|gb|EGJ52033.1| flagellar basal body rod protein [Desulfovibrio africanus str.
          Walvis Bay]
          Length = 126

 Score = 38.7 bits (88), Expect = 0.68,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 19/42 (45%)

Query: 8  GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK 49
           L A  A+  +L   A+N++N +T  FR  +V   +      
Sbjct: 6  SLQALDAVAIQLMVTANNVANVNTEEFRAARVDLEDGYQGQG 47



 Score = 38.3 bits (87), Expect = 0.86,   Method: Composition-based stats.
 Identities = 11/68 (16%), Positives = 25/68 (36%)

Query: 171 RRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230
           RR + G      P  L      T   G+++ SN +   E+ +++     + +   ++   
Sbjct: 55  RRSDQGPHIPDNPERLAAAGYATAAEGWVQGSNTDLAVELTRLMREEATYTANLRVMRTA 114

Query: 231 EKSMLEAI 238
            +     I
Sbjct: 115 HEMAGNII 122


>gi|329901227|ref|ZP_08272752.1| Flagellar basal-body rod protein FlgB [Oxalobacteraceae bacterium
          IMCC9480]
 gi|327549159|gb|EGF33751.1| Flagellar basal-body rod protein FlgB [Oxalobacteraceae bacterium
          IMCC9480]
          Length = 150

 Score = 38.7 bits (88), Expect = 0.68,   Method: Composition-based stats.
 Identities = 11/68 (16%), Positives = 23/68 (33%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69
           A     QR   +A N++N DT  ++   + F+  + +             +       E
Sbjct: 14 TALNLRGQRQQLIASNIANADTPNYKARDIDFNSAMKSALARSGTATGATMATAAVQPAE 73

Query: 70 VGSFISTG 77
          +    +T 
Sbjct: 74 LARTSTTH 81


>gi|323700468|ref|ZP_08112380.1| flagellar hook-associated protein FlgK [Desulfovibrio sp. ND132]
 gi|323460400|gb|EGB16265.1| flagellar hook-associated protein FlgK [Desulfovibrio desulfuricans
           ND132]
          Length = 669

 Score = 38.7 bits (88), Expect = 0.68,   Method: Composition-based stats.
 Identities = 6/38 (15%), Positives = 14/38 (36%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            S  N   E+ ++    Q + +   +I    + M   +
Sbjct: 629 TSEVNVDEELIELTKYQQAYEAAAQIISVTREMMETVL 666


>gi|242238966|ref|YP_002987147.1| flagellar basal-body rod protein FlgB [Dickeya dadantii Ech703]
 gi|242131023|gb|ACS85325.1| flagellar basal-body rod protein FlgB [Dickeya dadantii Ech703]
          Length = 137

 Score = 38.7 bits (88), Expect = 0.68,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 18/44 (40%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54
          A     QR   +A N++N DT G++   + F+  +         
Sbjct: 15 ALNLRAQRQEILAGNIANADTPGYQARDIDFANELKKAMKQGRT 58


>gi|109948141|ref|YP_665369.1| flagellar basal body rod protein FlgB [Helicobacter acinonychis
          str. Sheeba]
 gi|109715362|emb|CAK00370.1| flagellar basal-body rod protein FlgB [Helicobacter acinonychis
          str. Sheeba]
          Length = 140

 Score = 38.7 bits (88), Expect = 0.68,   Method: Composition-based stats.
 Identities = 9/29 (31%), Positives = 15/29 (51%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVG 46
          R   +A N++N DT  +R   + F  V+ 
Sbjct: 20 RQDMIASNIANVDTPFYRPKDLDFESVLA 48


>gi|149184213|ref|ZP_01862531.1| Flagellar hook-associated protein [Erythrobacter sp. SD-21]
 gi|148831533|gb|EDL49966.1| Flagellar hook-associated protein [Erythrobacter sp. SD-21]
          Length = 446

 Score = 38.7 bits (88), Expect = 0.69,   Method: Composition-based stats.
 Identities = 23/156 (14%), Positives = 39/156 (25%), Gaps = 18/156 (11%)

Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160
           TR      T  G + +A      LD +S                  E +      A    
Sbjct: 287 TRLDTIAATLAGVVNNAQAAGVSLDGSSGQPIFAGTTAAGLRVVMSEGAGLATAPAGASA 346

Query: 161 YSVDMS------QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLE------------DS 202
            S D +      Q     + +    N+       ++G  V +  LE             S
Sbjct: 347 NSRDDANLGALRQSLAALDPAQQLSNVLFDVSSKVAGRNVTQSALETIASSARISLEQQS 406

Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
             +   E   +I   Q F +    +          +
Sbjct: 407 GVDLDTEAANLIRFQQAFQASGRAMQAASDIFNTLL 442


>gi|319781664|ref|YP_004141140.1| flagellar hook-associated protein FlgK [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317167552|gb|ADV11090.1| flagellar hook-associated protein FlgK [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 484

 Score = 38.7 bits (88), Expect = 0.70,   Method: Composition-based stats.
 Identities = 7/44 (15%), Positives = 16/44 (36%), Gaps = 3/44 (6%)

Query: 202 SN---ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           SN    N   EM  ++ L   + +   ++   +  M   +  + 
Sbjct: 441 SNATGVNVDQEMSLLLDLEHTYQASARMMKTVDDMMTALLNAVG 484


>gi|262394933|ref|YP_003286787.1| flagellar hook-associated protein FlgK [Vibrio sp. Ex25]
 gi|262338527|gb|ACY52322.1| flagellar hook-associated protein FlgK [Vibrio sp. Ex25]
          Length = 646

 Score = 38.7 bits (88), Expect = 0.70,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 20/35 (57%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39
           N+G  + L  +++L+T   N+SN +T G+    V
Sbjct: 6  LNVGTQSVLTAQRQLNTTGHNISNVNTEGYSRQSV 40



 Score = 37.9 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 5/38 (13%), Positives = 14/38 (36%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           S  N   E   M+   Q + + + ++     +    ++
Sbjct: 607 SGVNLDEEAANMMKFQQAYMASSRVMQAANDTFNTILQ 644


>gi|182418468|ref|ZP_02949762.1| flagellar basal-body rod protein FlgB [Clostridium butyricum
          5521]
 gi|237666504|ref|ZP_04526489.1| flagellar basal-body rod protein FlgB [Clostridium butyricum E4
          str. BoNT E BL5262]
 gi|182377850|gb|EDT75394.1| flagellar basal-body rod protein FlgB [Clostridium butyricum
          5521]
 gi|237657703|gb|EEP55258.1| flagellar basal-body rod protein FlgB [Clostridium butyricum E4
          str. BoNT E BL5262]
          Length = 148

 Score = 38.7 bits (88), Expect = 0.71,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 17/33 (51%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
             A   R  T+++NM+N +T  ++   V F E
Sbjct: 18 GLKASNLRAKTISNNMANINTKNYKKFGVVFEE 50


>gi|260774944|ref|ZP_05883845.1| flagellar hook-associated protein FlgK [Vibrio coralliilyticus
          ATCC BAA-450]
 gi|260609199|gb|EEX35357.1| flagellar hook-associated protein FlgK [Vibrio coralliilyticus
          ATCC BAA-450]
          Length = 624

 Score = 38.7 bits (88), Expect = 0.71,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 27/79 (34%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
           N+G  + L  +++L+T   N+SN +T G+    V     +          +        
Sbjct: 6  LNLGSQSVLTAQRQLNTTGHNISNVNTEGYSRQSVIQGANMPRQYGGETYGMGVHVEKVR 65

Query: 65 YLSKEVGSFISTGTELDFA 83
              +        +  ++A
Sbjct: 66 RSWDQFAVNEMNISTTNYA 84



 Score = 36.0 bits (81), Expect = 5.1,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 13/37 (35%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N   E   M+   Q + + + ++     +    +
Sbjct: 585 SGVNLDEEAANMMKFQQAYMASSRIMQAANDTFNTIL 621


>gi|116626183|ref|YP_828339.1| flagellar hook-associated protein FlgK [Candidatus Solibacter
           usitatus Ellin6076]
 gi|116229345|gb|ABJ88054.1| flagellar hook-associated protein FlgK [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 475

 Score = 38.7 bits (88), Expect = 0.71,   Method: Composition-based stats.
 Identities = 3/40 (7%), Positives = 14/40 (35%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243
            +   E   ++   + + +    +   ++    AI  + +
Sbjct: 436 VSLDEEATTLMQFQRAYQANAKYLSVLDELTQTAIDILKT 475


>gi|288958047|ref|YP_003448388.1| flagellar basal-body rod protein [Azospirillum sp. B510]
 gi|288910355|dbj|BAI71844.1| flagellar basal-body rod protein [Azospirillum sp. B510]
          Length = 134

 Score = 38.7 bits (88), Expect = 0.72,   Method: Composition-based stats.
 Identities = 11/86 (12%), Positives = 27/86 (31%), Gaps = 3/86 (3%)

Query: 12  QLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDIDQKISFVASGKEYLSK 68
              L QR   ++ N++N DT  ++   +    F + +   +       S         + 
Sbjct: 16  MDWLTQRQEVLSQNIANADTPEYKGRDLKPFSFRDALSDNRRLTPVATSAGHLAGTRGAG 75

Query: 69  EVGSFISTGTELDFALEGDAWFALES 94
            +          + A +G+     + 
Sbjct: 76  GMAQEQKVRDPYETAPDGNNVVLEDQ 101


>gi|254499116|ref|ZP_05111806.1| putative flagellar basal-body rod protein FlgB [Legionella
          drancourtii LLAP12]
 gi|254351655|gb|EET10500.1| putative flagellar basal-body rod protein FlgB [Legionella
          drancourtii LLAP12]
          Length = 112

 Score = 38.7 bits (88), Expect = 0.72,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 23/38 (60%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI 48
          A  A   R + +A+N++N +T G++T++V F + +   
Sbjct: 13 ALDATLMRQTAIANNVANINTPGYQTLEVNFEQQLNEN 50


>gi|225871924|ref|YP_002753378.1| putative flagellar basal-body rod protein FlgB [Acidobacterium
           capsulatum ATCC 51196]
 gi|225793071|gb|ACO33161.1| putative flagellar basal-body rod protein FlgB [Acidobacterium
           capsulatum ATCC 51196]
          Length = 155

 Score = 38.7 bits (88), Expect = 0.72,   Method: Composition-based stats.
 Identities = 21/117 (17%), Positives = 39/117 (33%), Gaps = 3/117 (2%)

Query: 18  RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFV-ASGKEYLSKEVGSFIST 76
            L   A NM+N DT G+RT+   F+  +      ++++      +               
Sbjct: 21  ELKVTAQNMANVDTPGYRTVGFNFAAAMQQSVESLEERRIDRERTIAATHGLNGDGSQGA 80

Query: 77  GTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQI 133
              +D A   +          + L R G      DG+ VS   +   +  A +   +
Sbjct: 81  FAAMDAASYAEPLLPASDA--VALHRVGGLLERPDGNDVSVDREGMNMAKAQLQFNM 135


>gi|313683370|ref|YP_004061108.1| flagellar basal-body rod protein flgb [Sulfuricurvum kujiense DSM
          16994]
 gi|313156230|gb|ADR34908.1| flagellar basal-body rod protein FlgB [Sulfuricurvum kujiense DSM
          16994]
          Length = 142

 Score = 38.7 bits (88), Expect = 0.72,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 17/43 (39%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
           A      R   ++ N++N DT  +R   + F + +      I
Sbjct: 14 NAMDYRAARQDMISGNIANADTPFYRPRDISFEDTLAQKSAQI 56


>gi|82777312|ref|YP_403661.1| flagellar basal body rod protein FlgB [Shigella dysenteriae
          Sd197]
 gi|81241460|gb|ABB62170.1| cell-proximal portion of basal-body rod [Shigella dysenteriae
          Sd197]
          Length = 138

 Score = 38.7 bits (88), Expect = 0.73,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 22/62 (35%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   +A N++N DT G++   + F+  +  +        S VA          
Sbjct: 15 ALNLRAQRQEVLAANIANADTPGYQVRDIDFASELKKVMQRGRDATSVVALMMTSTQHIP 74

Query: 71 GS 72
            
Sbjct: 75 AQ 76


>gi|229189835|ref|ZP_04316846.1| Flagellar hook-associated protein FlgK [Bacillus cereus ATCC 10876]
 gi|228593643|gb|EEK51451.1| Flagellar hook-associated protein FlgK [Bacillus cereus ATCC 10876]
          Length = 432

 Score = 38.7 bits (88), Expect = 0.74,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 32/101 (31%), Gaps = 6/101 (5%)

Query: 6   NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65
           N  L+  LA +  L T   N+SN  T G+    V +    G  K    ++          
Sbjct: 7   NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSA-GGSKGYAPEQRIGYGVQTLG 65

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106
           + +      +         +  + F+  +     L+R    
Sbjct: 66  VDRITDEVKTKQYN-----DQMSQFSYYAYMNSTLSRVESM 101



 Score = 37.9 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 5/34 (14%), Positives = 11/34 (32%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
            N   EM  ++   + F + +  I    +     
Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427


>gi|224437871|ref|ZP_03658818.1| flagellar basal body rod protein FlgB [Helicobacter cinaedi CCUG
          18818]
 gi|313144320|ref|ZP_07806513.1| flagellar basal body rod protein FlgB [Helicobacter cinaedi CCUG
          18818]
 gi|313129351|gb|EFR46968.1| flagellar basal body rod protein FlgB [Helicobacter cinaedi CCUG
          18818]
          Length = 144

 Score = 38.7 bits (88), Expect = 0.74,   Method: Composition-based stats.
 Identities = 9/30 (30%), Positives = 15/30 (50%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGA 47
          R   +A N++N DT  +R   V F + +  
Sbjct: 23 RQDMIASNIANVDTPFYRPKDVNFEQYLAR 52


>gi|150395482|ref|YP_001325949.1| flagellar basal body rod protein FlgB [Sinorhizobium medicae
          WSM419]
 gi|150026997|gb|ABR59114.1| flagellar basal body rod protein [Sinorhizobium medicae WSM419]
          Length = 126

 Score = 38.7 bits (88), Expect = 0.74,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 18/36 (50%), Gaps = 1/36 (2%)

Query: 15 LEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIK 49
          L  R + VA N++N +T  ++   V+ F  V+    
Sbjct: 17 LSVRQNVVAGNIANANTPHYKARDVQPFESVLQNTG 52


>gi|291334309|gb|ADD93970.1| predicted flagellar proximal rod protein [uncultured marine
          bacterium MedDCM-OCT-S09-C247]
          Length = 146

 Score = 38.7 bits (88), Expect = 0.74,   Method: Composition-based stats.
 Identities = 9/49 (18%), Positives = 20/49 (40%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50
          +    +   A     QR   +A N++N+ T  F+   + F  ++ +   
Sbjct: 23 ENQLRVHAEALNLRSQRNEILASNIANSATPNFKAKDLDFEALLNSRMG 71


>gi|190573788|ref|YP_001971633.1| hypothetical protein Smlt1808 [Stenotrophomonas maltophilia
          K279a]
 gi|190011710|emb|CAQ45329.1| conserved hypothetical protein [Stenotrophomonas maltophilia
          K279a]
          Length = 99

 Score = 38.7 bits (88), Expect = 0.74,   Method: Composition-based stats.
 Identities = 9/32 (28%), Positives = 13/32 (40%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32
          M     I L    A +Q +   A N++N  T 
Sbjct: 1  MNNVMGIALGGMRAAQQGVQVAAHNVANLATP 32


>gi|126441590|ref|YP_001057329.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           668]
 gi|134283597|ref|ZP_01770296.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           305]
 gi|217425071|ref|ZP_03456567.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           576]
 gi|226199842|ref|ZP_03795393.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           Pakistan 9]
 gi|237810468|ref|YP_002894919.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           MSHR346]
 gi|238562529|ref|ZP_00440322.2| flagellar hook-associated protein FlgK [Burkholderia mallei GB8
           horse 4]
 gi|251767452|ref|ZP_02267340.2| flagellar hook-associated protein 1 [Burkholderia mallei PRL-20]
 gi|254188065|ref|ZP_04894577.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           Pasteur 52237]
 gi|254201902|ref|ZP_04908266.1| flagellar hook-associated protein 1 [Burkholderia mallei FMH]
 gi|254207237|ref|ZP_04913588.1| flagellar hook-associated protein 1 [Burkholderia mallei JHU]
 gi|254295821|ref|ZP_04963278.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           406e]
 gi|126221083|gb|ABN84589.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           668]
 gi|134245006|gb|EBA45101.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           305]
 gi|147747796|gb|EDK54872.1| flagellar hook-associated protein 1 [Burkholderia mallei FMH]
 gi|147752779|gb|EDK59845.1| flagellar hook-associated protein 1 [Burkholderia mallei JHU]
 gi|157805698|gb|EDO82868.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           406e]
 gi|157935745|gb|EDO91415.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           Pasteur 52237]
 gi|217392091|gb|EEC32117.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           576]
 gi|225928193|gb|EEH24229.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           Pakistan 9]
 gi|237506435|gb|ACQ98753.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           MSHR346]
 gi|238522496|gb|EEP85940.1| flagellar hook-associated protein FlgK [Burkholderia mallei GB8
           horse 4]
 gi|243062745|gb|EES44931.1| flagellar hook-associated protein 1 [Burkholderia mallei PRL-20]
          Length = 714

 Score = 38.7 bits (88), Expect = 0.74,   Method: Composition-based stats.
 Identities = 8/72 (11%), Positives = 20/72 (27%)

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
            G+V    +  S     +  +      + +     S  N   E   ++   Q + +   +
Sbjct: 639 AGYVNAIGNAASQLKASSAAQTALVGQITQAQQSVSGVNQNEEAANLMQYQQLYQANAKV 698

Query: 227 IDENEKSMLEAI 238
           I          +
Sbjct: 699 IQTANSVFQTVL 710



 Score = 38.3 bits (87), Expect = 0.93,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 27/80 (33%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
            T  N+G++   A    L+T   N+SN  T G+   +  ++E  G   +           
Sbjct: 50  NTLMNLGVSGLNAALWGLTTTGQNISNAATPGYSVERPVYAEASGQYTSSGYLPQGVSTV 109

Query: 62  GKEYLSKEVGSFISTGTELD 81
             E    +  S      +  
Sbjct: 110 TVERQYNQYLSNQLNAAQTQ 129


>gi|330720176|gb|EGG98565.1| Flagellar basal-body rod protein FlgB [gamma proteobacterium
          IMCC2047]
          Length = 108

 Score = 38.7 bits (88), Expect = 0.75,   Method: Composition-based stats.
 Identities = 10/62 (16%), Positives = 25/62 (40%)

Query: 21 TVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTEL 80
           +A+N++N DT G+++  + F  ++   K+D    +    S     +  + +        
Sbjct: 1  MLANNIANADTPGYQSRDMDFKALLMQAKSDQGVNLKRTNSRHFSTANAMETGAGLQYRT 60

Query: 81 DF 82
            
Sbjct: 61 PM 62


>gi|253998482|ref|YP_003050545.1| flagellar hook-associated protein FlgK [Methylovorus sp. SIP3-4]
 gi|253985161|gb|ACT50018.1| flagellar hook-associated protein FlgK [Methylovorus sp. SIP3-4]
          Length = 647

 Score = 38.7 bits (88), Expect = 0.75,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 19/46 (41%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50
           NIG +A  A +  +S   +N+SN  + G+    +  S        
Sbjct: 6  LNIGKSALNAAQIGISVTGNNISNASSAGYNRQVISQSAAASQNVG 51



 Score = 37.9 bits (86), Expect = 1.3,   Method: Composition-based stats.
 Identities = 5/39 (12%), Positives = 13/39 (33%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +S  N   E   ++   Q + +   ++    +     I 
Sbjct: 607 NSGVNLDEEAANLLRYQQSYQAAAKVMQIASQMFDTLIN 645


>gi|228952118|ref|ZP_04114213.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|228807650|gb|EEM54174.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
          Length = 432

 Score = 38.7 bits (88), Expect = 0.75,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 32/101 (31%), Gaps = 6/101 (5%)

Query: 6   NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65
           N  L+  LA +  L T   N+SN  T G+    V +    G  K    ++          
Sbjct: 7   NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSA-GGSKGYAPEQRIGYGVQTLG 65

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106
           + +      +         +  + F+  +     L+R    
Sbjct: 66  VDRITDEVKTKQYN-----DQMSQFSYYAYMNSTLSRVESM 101



 Score = 37.9 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 5/34 (14%), Positives = 11/34 (32%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
            N   EM  ++   + F + +  I    +     
Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427


>gi|116619478|ref|YP_821634.1| flagellar basal-body rod protein FlgB [Candidatus Solibacter
           usitatus Ellin6076]
 gi|116222640|gb|ABJ81349.1| flagellar basal-body rod protein FlgB [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 136

 Score = 38.7 bits (88), Expect = 0.75,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 25/74 (33%)

Query: 12  QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
              L  R   VA N++N DT G+ T  + F   +      + Q         +    +V 
Sbjct: 39  MDLLSARQKLVASNIANADTPGYLTQDLDFQAELRNASGRMPQVSGVAGLKIKNDGNDVS 98

Query: 72  SFISTGTELDFALE 85
               +    + AL 
Sbjct: 99  LDRESRLLAENALR 112


>gi|42526721|ref|NP_971819.1| flagellar basal-body rod protein FlgB [Treponema denticola ATCC
          35405]
 gi|41817036|gb|AAS11730.1| flagellar basal-body rod protein FlgB [Treponema denticola ATCC
          35405]
 gi|325473783|gb|EGC76971.1| FlgB protein [Treponema denticola F0402]
          Length = 139

 Score = 38.7 bits (88), Expect = 0.75,   Method: Composition-based stats.
 Identities = 8/72 (11%), Positives = 22/72 (30%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A      R +  ++N++N+D   F+  +V F   +    +              +     
Sbjct: 16 ALDVNSLRYTVTSNNLANSDVPNFKRTEVNFESELKRAFDSEKNAKGAFQLATTHPLHIK 75

Query: 71 GSFISTGTELDF 82
           +       ++ 
Sbjct: 76 SNEPIDYKTVEP 87


>gi|260779350|ref|ZP_05888242.1| flagellar basal-body rod protein FlgB [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260605514|gb|EEX31809.1| flagellar basal-body rod protein FlgB [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 120

 Score = 38.7 bits (88), Expect = 0.76,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 28/85 (32%), Gaps = 1/85 (1%)

Query: 17  QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76
           QR   +A N++N DT G+    + F+ V+  + +               +          
Sbjct: 21  QRTKVLASNLANVDTPGYLAKDLSFTTVMNQL-SPHGVNKPVPKLQVSSMYSIPYQNSKD 79

Query: 77  GTELDFALEGDAWFALESPRGIILT 101
           G  ++  +E   +          LT
Sbjct: 80  GNTVELGVEQGKFTQNNMDFQTSLT 104


>gi|152975150|ref|YP_001374667.1| flagellar hook-associated protein FlgK [Bacillus cereus subsp.
           cytotoxis NVH 391-98]
 gi|152023902|gb|ABS21672.1| flagellar hook-associated protein FlgK [Bacillus cytotoxicus NVH
           391-98]
          Length = 440

 Score = 38.7 bits (88), Expect = 0.76,   Method: Composition-based stats.
 Identities = 5/34 (14%), Positives = 11/34 (32%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
            N   EM  ++   + F + +  I    +     
Sbjct: 402 VNMEEEMVNLMAFQKYFVANSKAISTMNEVFDSL 435



 Score = 37.5 bits (85), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 24/53 (45%)

Query: 6  NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
          N  L+  LA +  L T   N++N  T G+    V +  V     N  +Q+I +
Sbjct: 7  NTPLSGMLAAQVGLKTTQQNLTNIHTPGYVRQAVNYGSVGANNGNTPEQRIGY 59


>gi|313200557|ref|YP_004039215.1| flagellar hook-associated protein flgk [Methylovorus sp. MP688]
 gi|312439873|gb|ADQ83979.1| flagellar hook-associated protein FlgK [Methylovorus sp. MP688]
          Length = 647

 Score = 38.7 bits (88), Expect = 0.76,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 19/46 (41%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50
           NIG +A  A +  +S   +N+SN  + G+    +  S        
Sbjct: 6  LNIGKSALNAAQIGISVTGNNISNASSAGYNRQVISQSAAASQNVG 51



 Score = 37.9 bits (86), Expect = 1.3,   Method: Composition-based stats.
 Identities = 5/39 (12%), Positives = 13/39 (33%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           +S  N   E   ++   Q + +   ++    +     I 
Sbjct: 607 NSGVNLDEEAANLLRYQQSYQAAAKVMQIASQMFDTLIN 645


>gi|229149940|ref|ZP_04278168.1| Flagellar hook-associated protein FlgK [Bacillus cereus m1550]
 gi|228633621|gb|EEK90222.1| Flagellar hook-associated protein FlgK [Bacillus cereus m1550]
          Length = 432

 Score = 38.7 bits (88), Expect = 0.76,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 32/101 (31%), Gaps = 6/101 (5%)

Query: 6   NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65
           N  L+  LA +  L T   N+SN  T G+    V +    G  K    ++          
Sbjct: 7   NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSA-GGSKGYAPEQRIGYGVQTLG 65

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106
           + +      +         +  + F+  +     L+R    
Sbjct: 66  VDRITDEVKTKQYN-----DQMSQFSYYAYMNSTLSRVESM 101



 Score = 37.9 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 5/34 (14%), Positives = 11/34 (32%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
            N   EM  ++   + F + +  I    +     
Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427


>gi|146305248|ref|YP_001185713.1| flagellar basal body rod protein FlgC [Pseudomonas mendocina ymp]
 gi|145573449|gb|ABP82981.1| flagellar basal-body rod protein FlgC [Pseudomonas mendocina ymp]
          Length = 142

 Score = 38.7 bits (88), Expect = 0.76,   Method: Composition-based stats.
 Identities = 6/43 (13%), Positives = 21/43 (48%)

Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           +G++  ++ + + EM  M+  T+ F +   +++  +      +
Sbjct: 95  QGYVFYADIDQIEEMTDMMSATRSFETSVEVLNRLKSMQQGLL 137


>gi|254182133|ref|ZP_04888730.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           1655]
 gi|184212671|gb|EDU09714.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           1655]
          Length = 714

 Score = 38.7 bits (88), Expect = 0.77,   Method: Composition-based stats.
 Identities = 8/72 (11%), Positives = 20/72 (27%)

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
            G+V    +  S     +  +      + +     S  N   E   ++   Q + +   +
Sbjct: 639 AGYVNAIGNAASQLKASSAAQTALVGQITQAQQSVSGVNQNEEAANLMQYQQLYQANAKV 698

Query: 227 IDENEKSMLEAI 238
           I          +
Sbjct: 699 IQTANSVFQTVL 710



 Score = 38.3 bits (87), Expect = 0.95,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 27/80 (33%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
            T  N+G++   A    L+T   N+SN  T G+   +  ++E  G   +           
Sbjct: 50  NTLMNLGVSGLNAALWGLTTTGQNISNAATPGYSVERPVYAEASGQYTSSGYLPQGVSTV 109

Query: 62  GKEYLSKEVGSFISTGTELD 81
             E    +  S      +  
Sbjct: 110 TVERQYNQYLSNQLNAAQTQ 129


>gi|170768328|ref|ZP_02902781.1| flagellar basal-body rod protein FlgB [Escherichia albertii
          TW07627]
 gi|170123094|gb|EDS92025.1| flagellar basal-body rod protein FlgB [Escherichia albertii
          TW07627]
          Length = 138

 Score = 38.7 bits (88), Expect = 0.77,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 21/62 (33%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   +A N++N DT  ++   + F+  +  +      +   VA          
Sbjct: 15 ALNLRAQRQEVLAANIANADTPAYQARDIDFASELKRVMQRRRDETRVVALTLTSTQHIP 74

Query: 71 GS 72
            
Sbjct: 75 AQ 76


>gi|163794165|ref|ZP_02188138.1| hypothetical protein BAL199_02089 [alpha proteobacterium BAL199]
 gi|159180779|gb|EDP65298.1| hypothetical protein BAL199_02089 [alpha proteobacterium BAL199]
          Length = 476

 Score = 38.7 bits (88), Expect = 0.77,   Method: Composition-based stats.
 Identities = 3/33 (9%), Positives = 13/33 (39%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGF 34
            +     +   A + ++   + N+++    G+
Sbjct: 4  LNAIYSASSGIAAAQAKIDVASRNIASASVEGY 36


>gi|71906388|ref|YP_283975.1| flagellar basal-body rod protein FlgB [Dechloromonas aromatica
          RCB]
 gi|71846009|gb|AAZ45505.1| Flagellar basal-body rod protein FlgB [Dechloromonas aromatica
          RCB]
          Length = 135

 Score = 38.7 bits (88), Expect = 0.77,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 18/56 (32%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66
          A     QR   +A N++N DT  ++     F   +             +A+     
Sbjct: 14 AMNLRTQRHQVLASNIANADTPNYKARDFSFESAMQNAMAGRGNGSVALATTSSGH 69


>gi|114320054|ref|YP_741737.1| flagellar basal-body rod protein FlgB [Alkalilimnicola ehrlichii
          MLHE-1]
 gi|114226448|gb|ABI56247.1| flagellar basal-body rod protein FlgB [Alkalilimnicola ehrlichii
          MLHE-1]
          Length = 134

 Score = 38.7 bits (88), Expect = 0.77,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 21/54 (38%), Gaps = 2/54 (3%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
             A   +L  +A N++N DT  ++   + F   + A +    Q +    +   
Sbjct: 17 RLRAERSQL--LASNIANADTPHYKAQDMDFQAAMRAAEGKQAQPLQATHAKHF 68


>gi|330818588|ref|YP_004362293.1| flagellar basal-body rod protein FlgB [Burkholderia gladioli
          BSR3]
 gi|327370981|gb|AEA62337.1| flagellar basal-body rod protein FlgB [Burkholderia gladioli
          BSR3]
          Length = 162

 Score = 38.7 bits (88), Expect = 0.79,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 17/41 (41%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51
          A      R   ++ N++N DT G++   V F   +G     
Sbjct: 15 ALDVRAYRQELLSSNIANADTPGYQARDVDFGATLGRALKQ 55


>gi|229043492|ref|ZP_04191202.1| Flagellar hook-associated protein FlgK [Bacillus cereus AH676]
 gi|228725870|gb|EEL77117.1| Flagellar hook-associated protein FlgK [Bacillus cereus AH676]
          Length = 432

 Score = 38.7 bits (88), Expect = 0.79,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 32/101 (31%), Gaps = 6/101 (5%)

Query: 6   NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65
           N  L+  LA +  L T   N+SN  T G+    V +    G  K    ++          
Sbjct: 7   NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSA-GGSKGYAPEQRIGYGVQTLG 65

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106
           + +      +         +  + F+  +     L+R    
Sbjct: 66  VDRITDEVKTKQYN-----DQMSQFSYYAYMNSTLSRVESM 101



 Score = 37.9 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 5/34 (14%), Positives = 11/34 (32%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
            N   EM  ++   + F + +  I    +     
Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427


>gi|323178496|gb|EFZ64074.1| flagellar basal-body rod protein FlgC [Escherichia coli 1180]
          Length = 130

 Score = 38.7 bits (88), Expect = 0.80,   Method: Composition-based stats.
 Identities = 4/35 (11%), Positives = 15/35 (42%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            N + +M  M+  ++ F +   +++  +      +
Sbjct: 91  VNVVEQMADMMSASRDFETNVDVLNNVKSMQQSLL 125



 Score = 36.0 bits (81), Expect = 4.5,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 17/40 (42%), Gaps = 6/40 (15%)

Query: 12 QLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVV 45
            A   RL+TVA N++N +         ++     F+ V 
Sbjct: 1  MTAQTLRLNTVASNLANANAPASSEAQAYKARSPVFAAVY 40


>gi|167917171|ref|ZP_02504262.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           BCC215]
          Length = 667

 Score = 38.7 bits (88), Expect = 0.80,   Method: Composition-based stats.
 Identities = 8/72 (11%), Positives = 20/72 (27%)

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
            G+V    +  S     +  +      + +     S  N   E   ++   Q + +   +
Sbjct: 592 AGYVNAIGNAASQLKASSAAQTALVGQITQAQQSVSGVNQNEEAANLMQYQQLYQANAKV 651

Query: 227 IDENEKSMLEAI 238
           I          +
Sbjct: 652 IQTANSVFQTVL 663



 Score = 38.3 bits (87), Expect = 1.0,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 27/80 (33%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           T  N+G++   A    L+T   N+SN  T G+   +  ++E  G   +           
Sbjct: 3  NTLMNLGVSGLNAALWGLTTTGQNISNAATPGYSVERPVYAEASGQYTSSGYLPQGVSTV 62

Query: 62 GKEYLSKEVGSFISTGTELD 81
            E    +  S      +  
Sbjct: 63 TVERQYNQYLSNQLNAAQTQ 82


>gi|313620054|gb|EFR91569.1| flagellar basal-body rod protein FlgC [Listeria innocua FSL
          S4-378]
          Length = 121

 Score = 38.7 bits (88), Expect = 0.81,   Method: Composition-based stats.
 Identities = 8/30 (26%), Positives = 15/30 (50%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTD 30
          M    N   +A  A +Q +   ++N++N D
Sbjct: 1  MFEGINTSGSALNAAKQWMEVSSNNIANAD 30



 Score = 37.2 bits (84), Expect = 2.1,   Method: Composition-based stats.
 Identities = 5/32 (15%), Positives = 16/32 (50%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228
           G++  +N +   EM  ++   + + + T+ + 
Sbjct: 90  GYVNYANVDMTAEMTNLMVGQKMYAANTSALQ 121


>gi|270262404|ref|ZP_06190675.1| flagellar basal-body rod protein FlgB [Serratia odorifera 4Rx13]
 gi|270043088|gb|EFA16181.1| flagellar basal-body rod protein FlgB [Serratia odorifera 4Rx13]
          Length = 137

 Score = 38.7 bits (88), Expect = 0.81,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 23/65 (35%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   +A N++N DT G++   + F+  +  +        S +A          
Sbjct: 15 ALNLRAQRQEILAANIANADTPGYQARDIDFAGQLNKVLAQGRVSGSGIALNMTSARHIP 74

Query: 71 GSFIS 75
             + 
Sbjct: 75 AQNMQ 79


>gi|226939377|ref|YP_002794450.1| FlgB [Laribacter hongkongensis HLHK9]
 gi|226714303|gb|ACO73441.1| FlgB [Laribacter hongkongensis HLHK9]
          Length = 154

 Score = 38.7 bits (88), Expect = 0.81,   Method: Composition-based stats.
 Identities = 9/67 (13%), Positives = 24/67 (35%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     +R   +A N++N DT  ++ +   F++ + +      +    ++          
Sbjct: 32 ALGLHARRNEVIASNIANADTPNYKAVDFDFAKAMKSALAGDSRSSLALSQTDNRHLAGK 91

Query: 71 GSFISTG 77
           +   T 
Sbjct: 92 QTQQGTD 98


>gi|76809667|ref|YP_331888.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           1710b]
 gi|167892419|ref|ZP_02479821.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           7894]
 gi|167909135|ref|ZP_02496226.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           112]
 gi|76579120|gb|ABA48595.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           1710b]
          Length = 667

 Score = 38.7 bits (88), Expect = 0.81,   Method: Composition-based stats.
 Identities = 8/72 (11%), Positives = 20/72 (27%)

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
            G+V    +  S     +  +      + +     S  N   E   ++   Q + +   +
Sbjct: 592 AGYVNAIGNAASQLKASSAAQTALVGQITQAQQSVSGVNQNEEAANLMQYQQLYQANAKV 651

Query: 227 IDENEKSMLEAI 238
           I          +
Sbjct: 652 IQTANSVFQTVL 663



 Score = 38.3 bits (87), Expect = 0.99,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 27/80 (33%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           T  N+G++   A    L+T   N+SN  T G+   +  ++E  G   +           
Sbjct: 3  NTLMNLGVSGLNAALWGLTTTGQNISNAATPGYSVERPVYAEASGQYTSSGYLPQGVSTV 62

Query: 62 GKEYLSKEVGSFISTGTELD 81
            E    +  S      +  
Sbjct: 63 TVERQYNQYLSNQLNAAQTQ 82


>gi|53717921|ref|YP_106907.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           K96243]
 gi|53724572|ref|YP_104805.1| flagellar hook-associated protein FlgK [Burkholderia mallei ATCC
           23344]
 gi|121601252|ref|YP_994298.1| flagellar hook-associated protein FlgK [Burkholderia mallei SAVP1]
 gi|124385698|ref|YP_001028053.1| flagellar hook-associated protein FlgK [Burkholderia mallei NCTC
           10229]
 gi|126448312|ref|YP_001082860.1| flagellar hook-associated protein FlgK [Burkholderia mallei NCTC
           10247]
 gi|126451511|ref|YP_001064571.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           1106a]
 gi|167717670|ref|ZP_02400906.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           DM98]
 gi|167736711|ref|ZP_02409485.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           14]
 gi|167813810|ref|ZP_02445490.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           91]
 gi|167822327|ref|ZP_02453798.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           9]
 gi|167843917|ref|ZP_02469425.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           B7210]
 gi|167900916|ref|ZP_02488121.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           NCTC 13177]
 gi|242314954|ref|ZP_04813970.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           1106b]
 gi|254174885|ref|ZP_04881546.1| flagellar hook-associated protein 1 [Burkholderia mallei ATCC
           10399]
 gi|254197004|ref|ZP_04903428.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           S13]
 gi|254359739|ref|ZP_04976010.1| flagellar hook-associated protein 1 [Burkholderia mallei
           2002721280]
 gi|52208335|emb|CAH34268.1| putative flagellar hook-associated protein [Burkholderia
           pseudomallei K96243]
 gi|52427995|gb|AAU48588.1| flagellar hook-associated protein 1 [Burkholderia mallei ATCC
           23344]
 gi|121230062|gb|ABM52580.1| flagellar hook-associated protein 1 [Burkholderia mallei SAVP1]
 gi|124293718|gb|ABN02987.1| flagellar hook-associated protein FlgK [Burkholderia mallei NCTC
           10229]
 gi|126225153|gb|ABN88693.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           1106a]
 gi|126241182|gb|ABO04275.1| flagellar hook-associated protein FlgK [Burkholderia mallei NCTC
           10247]
 gi|148028953|gb|EDK86885.1| flagellar hook-associated protein 1 [Burkholderia mallei
           2002721280]
 gi|160695930|gb|EDP85900.1| flagellar hook-associated protein 1 [Burkholderia mallei ATCC
           10399]
 gi|169653747|gb|EDS86440.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           S13]
 gi|242138193|gb|EES24595.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
           1106b]
          Length = 667

 Score = 38.7 bits (88), Expect = 0.81,   Method: Composition-based stats.
 Identities = 8/72 (11%), Positives = 20/72 (27%)

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
            G+V    +  S     +  +      + +     S  N   E   ++   Q + +   +
Sbjct: 592 AGYVNAIGNAASQLKASSAAQTALVGQITQAQQSVSGVNQNEEAANLMQYQQLYQANAKV 651

Query: 227 IDENEKSMLEAI 238
           I          +
Sbjct: 652 IQTANSVFQTVL 663



 Score = 38.3 bits (87), Expect = 1.0,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 27/80 (33%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           T  N+G++   A    L+T   N+SN  T G+   +  ++E  G   +           
Sbjct: 3  NTLMNLGVSGLNAALWGLTTTGQNISNAATPGYSVERPVYAEASGQYTSSGYLPQGVSTV 62

Query: 62 GKEYLSKEVGSFISTGTELD 81
            E    +  S      +  
Sbjct: 63 TVERQYNQYLSNQLNAAQTQ 82


>gi|187926957|ref|YP_001893302.1| flagellar basal-body rod protein FlgB [Ralstonia pickettii 12J]
 gi|241665286|ref|YP_002983645.1| flagellar basal-body rod protein FlgB [Ralstonia pickettii 12D]
 gi|187728711|gb|ACD29875.1| flagellar basal-body rod protein FlgB [Ralstonia pickettii 12J]
 gi|240867313|gb|ACS64973.1| flagellar basal-body rod protein FlgB [Ralstonia pickettii 12D]
          Length = 151

 Score = 38.3 bits (87), Expect = 0.83,   Method: Composition-based stats.
 Identities = 11/78 (14%), Positives = 22/78 (28%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   +A N++N DT  ++     F   +             + +         
Sbjct: 15 ALRLRSQRHQILASNIANADTPNYKARDFDFQSALQKAVGQQSGNSLPMTATAAGHLTVD 74

Query: 71 GSFISTGTELDFALEGDA 88
          G+       +  +L    
Sbjct: 75 GAPAGEVALMQASLSQQT 92


>gi|119899021|ref|YP_934234.1| flagellar hook-filament junction protein 1 [Azoarcus sp. BH72]
 gi|119671434|emb|CAL95347.1| flagellar hook-filament junction protein 1 [Azoarcus sp. BH72]
          Length = 663

 Score = 38.3 bits (87), Expect = 0.83,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 17/39 (43%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39
          M    NIGL    A + +L T   N++N    G+    V
Sbjct: 1  MAGLLNIGLTGLNAAQAQLLTTGHNITNAGVEGYHRQTV 39


>gi|301646811|ref|ZP_07246663.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 146-1]
 gi|307136856|ref|ZP_07496212.1| flagellar basal body rod protein FlgC [Escherichia coli H736]
 gi|331640711|ref|ZP_08341858.1| flagellar basal-body rod protein FlgC [Escherichia coli H736]
 gi|301075004|gb|EFK89810.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 146-1]
 gi|315616829|gb|EFU97446.1| flagellar basal-body rod protein FlgC [Escherichia coli 3431]
 gi|331040085|gb|EGI12293.1| flagellar basal-body rod protein FlgC [Escherichia coli H736]
          Length = 143

 Score = 38.3 bits (87), Expect = 0.84,   Method: Composition-based stats.
 Identities = 4/35 (11%), Positives = 15/35 (42%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            N + +M  M+  ++ F +   +++  +      +
Sbjct: 104 VNVVEQMADMMSASRDFETNVDVLNNVKSMQQSLL 138



 Score = 36.0 bits (81), Expect = 4.4,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 6/45 (13%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVV 45
          I  +A  A   RL+TVA N++N +         ++     F+ V 
Sbjct: 9  ISGSAMTAQTIRLNTVASNLANAEAPAGSEAQAYKARSPVFAAVY 53


>gi|254258855|ref|ZP_04949909.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
          1710a]
 gi|254217544|gb|EET06928.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei
          1710a]
          Length = 419

 Score = 38.3 bits (87), Expect = 0.84,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 27/80 (33%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           T  N+G++   A    L+T   N+SN  T G+   +  ++E  G   +           
Sbjct: 3  NTLMNLGVSGLNAALWGLTTTGQNISNAATPGYSVERPVYAEASGQYTSSGYLPQGVSTV 62

Query: 62 GKEYLSKEVGSFISTGTELD 81
            E    +  S      +  
Sbjct: 63 TVERQYNQYLSNQLNAAQTQ 82


>gi|260466602|ref|ZP_05812790.1| flagellar hook-associated protein FlgK [Mesorhizobium opportunistum
           WSM2075]
 gi|259029608|gb|EEW30896.1| flagellar hook-associated protein FlgK [Mesorhizobium opportunistum
           WSM2075]
          Length = 470

 Score = 38.3 bits (87), Expect = 0.84,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 16/44 (36%), Gaps = 3/44 (6%)

Query: 202 SN---ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           SN    N   EM  M+ L   + +   ++   +  M   +  + 
Sbjct: 427 SNATGVNIDQEMSLMLDLEHTYQASARMMKTVDDMMTALLSAVG 470


>gi|254755230|ref|ZP_05207264.1| flagellar hook-associated protein FlgK [Bacillus anthracis str.
           Vollum]
          Length = 239

 Score = 38.3 bits (87), Expect = 0.86,   Method: Composition-based stats.
 Identities = 5/34 (14%), Positives = 11/34 (32%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
            N   EM  ++   + F + +  I    +     
Sbjct: 201 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 234


>gi|229155309|ref|ZP_04283420.1| Flagellar hook-associated protein FlgK [Bacillus cereus ATCC 4342]
 gi|228628234|gb|EEK84950.1| Flagellar hook-associated protein FlgK [Bacillus cereus ATCC 4342]
          Length = 432

 Score = 38.3 bits (87), Expect = 0.86,   Method: Composition-based stats.
 Identities = 5/34 (14%), Positives = 11/34 (32%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
            N   EM  ++   + F + +  I    +     
Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427



 Score = 37.9 bits (86), Expect = 1.2,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 23/53 (43%)

Query: 6  NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
          N  L+  LA +  L T   N+SN  T G+    V +     +     +QKI +
Sbjct: 7  NTPLSGLLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSAGASQGYSPEQKIGY 59


>gi|148976391|ref|ZP_01813097.1| flagellar basal-body rod protein B [Vibrionales bacterium SWAT-3]
 gi|145964214|gb|EDK29470.1| flagellar basal-body rod protein B [Vibrionales bacterium SWAT-3]
          Length = 131

 Score = 38.3 bits (87), Expect = 0.86,   Method: Composition-based stats.
 Identities = 6/38 (15%), Positives = 18/38 (47%)

Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
          E+    ++ N++  +T G++   + F + + A  +   
Sbjct: 20 ERNAEVLSTNIAQANTPGYKAKGLDFKKSLQAASSGAS 57


>gi|330818578|ref|YP_004362283.1| flagellar hook-associated protein FlgK [Burkholderia gladioli
          BSR3]
 gi|327370971|gb|AEA62327.1| flagellar hook-associated protein FlgK [Burkholderia gladioli
          BSR3]
          Length = 661

 Score = 38.3 bits (87), Expect = 0.86,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 32/83 (38%), Gaps = 1/83 (1%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA-IKNDIDQKISFVAS 61
             N+GL+   A    ++T   N+SN  T G+   +  F+E  G    N          +
Sbjct: 4  NLLNLGLSGINAALWGINTTGQNISNQATPGYSVERPVFAESDGQYTPNGFSPSGVTTVT 63

Query: 62 GKEYLSKEVGSFISTGTELDFAL 84
           +   S+ +   +++      AL
Sbjct: 64 VQRQFSQYLSDQLNSANTTASAL 86



 Score = 37.5 bits (85), Expect = 1.7,   Method: Composition-based stats.
 Identities = 10/85 (11%), Positives = 23/85 (27%), Gaps = 8/85 (9%)

Query: 162 SVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLED--------SNANSMYEMGQM 213
           + D     +    S    N+        +  +V+ G +          S  N   E   +
Sbjct: 573 AFDGGSTTLSAAYSSYVNNVGNAAASLSARSSVQAGVVSQITTQQQSVSGVNQNEEAVNL 632

Query: 214 IHLTQKFNSITTLIDENEKSMLEAI 238
           +   Q + +   +I          +
Sbjct: 633 MQYQQMYQANAKVIQTASTLFSTLL 657


>gi|229195951|ref|ZP_04322704.1| Flagellar hook-associated protein FlgK [Bacillus cereus m1293]
 gi|228587510|gb|EEK45575.1| Flagellar hook-associated protein FlgK [Bacillus cereus m1293]
          Length = 420

 Score = 38.3 bits (87), Expect = 0.86,   Method: Composition-based stats.
 Identities = 5/34 (14%), Positives = 11/34 (32%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
            N   EM  ++   + F + +  I    +     
Sbjct: 382 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 415


>gi|221215578|ref|ZP_03588541.1| flagellar hook-associated protein FlgK [Burkholderia multivorans
          CGD1]
 gi|221164566|gb|EED97049.1| flagellar hook-associated protein FlgK [Burkholderia multivorans
          CGD1]
          Length = 698

 Score = 38.3 bits (87), Expect = 0.86,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 23/51 (45%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
           T  N+G++   A    L+T   N+SN  T G+   +  ++E  G   +  
Sbjct: 42 NTLMNLGVSGLNAALWGLTTTGQNISNAATPGYSVERPVYAEASGQYTSSG 92



 Score = 36.0 bits (81), Expect = 4.1,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 11/37 (29%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N   E   ++   Q + +   +I          +
Sbjct: 658 SGVNQNEEAANLMQYQQLYQANAKVIQTAATLFQTVL 694


>gi|228964721|ref|ZP_04125828.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|228794971|gb|EEM42470.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis
           serovar sotto str. T04001]
          Length = 139

 Score = 38.3 bits (87), Expect = 0.87,   Method: Composition-based stats.
 Identities = 5/34 (14%), Positives = 11/34 (32%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
            N   EM  ++   + F + +  I    +     
Sbjct: 101 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 134


>gi|228984822|ref|ZP_04144994.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
 gi|228775020|gb|EEM23414.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
          Length = 432

 Score = 38.3 bits (87), Expect = 0.87,   Method: Composition-based stats.
 Identities = 5/34 (14%), Positives = 11/34 (32%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
            N   EM  ++   + F + +  I    +     
Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427



 Score = 37.5 bits (85), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 23/53 (43%)

Query: 6  NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
          N  L+  LA +  L T   N+SN  T G+    V +     +     +QKI +
Sbjct: 7  NTPLSGLLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSAGASHGYSPEQKIGY 59


>gi|222084862|ref|YP_002543391.1| flagellar basal-body rod protein [Agrobacterium radiobacter K84]
 gi|221722310|gb|ACM25466.1| flagellar basal-body rod protein [Agrobacterium radiobacter K84]
          Length = 130

 Score = 38.3 bits (87), Expect = 0.87,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 1/39 (2%)

Query: 15 LEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIKNDI 52
          L+ R   VA N++N +T  FR   V  F  V+      +
Sbjct: 17 LQTRQEVVAGNIANANTPKFRAKDVTPFQAVLDNQNVGM 55


>gi|206974984|ref|ZP_03235899.1| putative flagellar hook-associated protein [Bacillus cereus
           H3081.97]
 gi|206747003|gb|EDZ58395.1| putative flagellar hook-associated protein [Bacillus cereus
           H3081.97]
          Length = 415

 Score = 38.3 bits (87), Expect = 0.87,   Method: Composition-based stats.
 Identities = 5/34 (14%), Positives = 11/34 (32%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
            N   EM  ++   + F + +  I    +     
Sbjct: 377 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 410


>gi|86136708|ref|ZP_01055286.1| flagellar hook-associated protein [Roseobacter sp. MED193]
 gi|85826032|gb|EAQ46229.1| flagellar hook-associated protein [Roseobacter sp. MED193]
          Length = 471

 Score = 38.3 bits (87), Expect = 0.87,   Method: Composition-based stats.
 Identities = 5/36 (13%), Positives = 16/36 (44%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +S  E+  M+ +   + +   ++   ++ M   +R
Sbjct: 435 VDSDAELQNMMLIENAYAANAKMLSAIDEMMQTLLR 470


>gi|229138438|ref|ZP_04267027.1| Flagellar hook-associated protein FlgK [Bacillus cereus BDRD-ST26]
 gi|228644975|gb|EEL01218.1| Flagellar hook-associated protein FlgK [Bacillus cereus BDRD-ST26]
          Length = 420

 Score = 38.3 bits (87), Expect = 0.89,   Method: Composition-based stats.
 Identities = 5/34 (14%), Positives = 11/34 (32%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
            N   EM  ++   + F + +  I    +     
Sbjct: 382 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 415


>gi|114798876|ref|YP_758980.1| flagellar hook-associated protein FlgK [Hyphomonas neptunium ATCC
          15444]
 gi|114739050|gb|ABI77175.1| flagellar hook-associated protein FlgK [Hyphomonas neptunium ATCC
          15444]
          Length = 483

 Score = 38.3 bits (87), Expect = 0.89,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 18/46 (39%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK 49
          +     +      Q+   VA N++N  T G+    +   E+V   +
Sbjct: 6  AILAARSGLQVTSQKAEIVATNVANASTPGYVRRSLVVGELVNGSQ 51


>gi|115353111|ref|YP_774950.1| flagellar hook-associated protein FlgK [Burkholderia ambifaria
          AMMD]
 gi|115283099|gb|ABI88616.1| flagellar hook-associated protein FlgK [Burkholderia ambifaria
          AMMD]
          Length = 665

 Score = 38.3 bits (87), Expect = 0.89,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 25/69 (36%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           T  N+G++   A    L+T   N+SN  T G+   +  ++E  G   +           
Sbjct: 3  NTLMNLGVSGLNAALWGLTTTGQNISNAATPGYSVERPVYAEASGQYTSSGYMPQGVNTV 62

Query: 62 GKEYLSKEV 70
            +    + 
Sbjct: 63 TVQRQYSQY 71



 Score = 36.0 bits (81), Expect = 4.5,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 11/37 (29%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N   E   ++   Q + +   +I          +
Sbjct: 625 SGVNQNEEAANLMQYQQLYQANAKVIQTAATLFQTVL 661


>gi|283784083|ref|YP_003363948.1| lateral flagellar basal-body rod protein [Citrobacter rodentium
           ICC168]
 gi|282947537|emb|CBG87089.1| lateral flagellar basal-body rod protein [Citrobacter rodentium
           ICC168]
          Length = 143

 Score = 38.3 bits (87), Expect = 0.89,   Method: Composition-based stats.
 Identities = 5/42 (11%), Positives = 19/42 (45%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++   + N + +M  M+  ++ F +   +++  +      +
Sbjct: 97  GYVWYPDVNVVEQMADMMSASRDFETNVDVLNNVKSMQQSLL 138



 Score = 35.2 bits (79), Expect = 7.2,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 20/52 (38%), Gaps = 6/52 (11%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDI 52
          I  +A  A   RL+TVA N++N +         ++     F+ V        
Sbjct: 9  ISGSAMTAQTIRLNTVASNLANAEAPASSEAQAYKARSPVFAAVYNNSLTGA 60


>gi|295706288|ref|YP_003599363.1| flagellar basal-body rod protein FlgB [Bacillus megaterium DSM 319]
 gi|294803947|gb|ADF41013.1| flagellar basal-body rod protein FlgB [Bacillus megaterium DSM 319]
          Length = 129

 Score = 38.3 bits (87), Expect = 0.90,   Method: Composition-based stats.
 Identities = 12/95 (12%), Positives = 29/95 (30%), Gaps = 4/95 (4%)

Query: 10  AAQLALEQRLSTVADNMSNTDTVGFRTIKV----KFSEVVGAIKNDIDQKISFVASGKEY 65
                  Q+  T+A N++N DT  +++  V    +F +++             +      
Sbjct: 13  NGISYASQKQQTIAQNIANVDTPNYKSKTVTRTSEFRDLLHNELEAYQTDSKHIPFSDSS 72

Query: 66  LSKEVGSFISTGTELDFALEGDAWFALESPRGIIL 100
                    ++       ++ D   A  +   I  
Sbjct: 73  QRVITQQGNTSYQANGNNVDMDKEMADMAENQIYY 107


>gi|333008275|gb|EGK27749.1| flagellar basal-body rod protein flgC [Shigella flexneri K-272]
          Length = 90

 Score = 38.3 bits (87), Expect = 0.91,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 6/46 (13%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKF 41
             F+I  +A  A  QRL+  A N++N     G     +R  +V F
Sbjct: 4  LNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRAKQVVF 49


>gi|221199746|ref|ZP_03572789.1| flagellar hook-associated protein FlgK [Burkholderia multivorans
          CGD2M]
 gi|221208649|ref|ZP_03581649.1| flagellar hook-associated protein FlgK [Burkholderia multivorans
          CGD2]
 gi|221171460|gb|EEE03907.1| flagellar hook-associated protein FlgK [Burkholderia multivorans
          CGD2]
 gi|221179985|gb|EEE12389.1| flagellar hook-associated protein FlgK [Burkholderia multivorans
          CGD2M]
          Length = 698

 Score = 38.3 bits (87), Expect = 0.91,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 23/51 (45%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
           T  N+G++   A    L+T   N+SN  T G+   +  ++E  G   +  
Sbjct: 42 NTLMNLGVSGLNAALWGLTTTGQNISNAATPGYSVERPVYAEASGQYTSSG 92



 Score = 36.0 bits (81), Expect = 4.2,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 11/37 (29%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N   E   ++   Q + +   +I          +
Sbjct: 658 SGVNQNEEAANLMQYQQLYQANAKVIQTAATLFQTVL 694


>gi|167585191|ref|ZP_02377579.1| flagellar basal body rod protein FlgB [Burkholderia ubonensis Bu]
          Length = 162

 Score = 38.3 bits (87), Expect = 0.91,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 19/43 (44%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
          A      R   ++ N++N DT G++   V FS  +      ++
Sbjct: 15 ALDVRAYRQELLSSNIANADTPGYQARDVDFSSTLARSLKQVN 57


>gi|15606764|ref|NP_214144.1| flagellar hook associated protein FlgK [Aquifex aeolicus VF5]
 gi|2983977|gb|AAC07523.1| flagellar hook associated protein FlgK [Aquifex aeolicus VF5]
          Length = 426

 Score = 38.3 bits (87), Expect = 0.91,   Method: Composition-based stats.
 Identities = 3/41 (7%), Positives = 17/41 (41%)

Query: 199 LEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           LE    +   E  +++ + + + ++  ++   ++     + 
Sbjct: 384 LERQGVSIDQEFMEIMQIQKNYEAVAKILPRIDEMFRTLLN 424


>gi|300870953|ref|YP_003785824.1| flagellar hook associated protein FlgK [Brachyspira pilosicoli
           95/1000]
 gi|300688652|gb|ADK31323.1| flagellar hook associated protein, FlgK [Brachyspira pilosicoli
           95/1000]
          Length = 637

 Score = 38.3 bits (87), Expect = 0.92,   Method: Composition-based stats.
 Identities = 11/71 (15%), Positives = 24/71 (33%), Gaps = 5/71 (7%)

Query: 177 ISPNIPPTPLEDLSGVTVKRGFLED-----SNANSMYEMGQMIHLTQKFNSITTLIDENE 231
              +   T   +    T+   +LE      S  N   E+ QM      +N+   ++   +
Sbjct: 566 QIASRTETANSESEKQTIVMEYLEKLRQSVSGVNLDEEVAQMAMYQHGYNASARVVSVMD 625

Query: 232 KSMLEAIRNIA 242
           + +   I  + 
Sbjct: 626 QLLDVVINRMG 636


>gi|254723815|ref|ZP_05185601.1| flagellar hook-associated protein FlgK [Bacillus anthracis str.
           A1055]
          Length = 432

 Score = 38.3 bits (87), Expect = 0.92,   Method: Composition-based stats.
 Identities = 5/34 (14%), Positives = 11/34 (32%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
            N   EM  ++   + F + +  I    +     
Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427



 Score = 37.9 bits (86), Expect = 1.3,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 23/53 (43%)

Query: 6  NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
          N  L+  LA +  L T   N+SN  T G+    V +     +     +QKI +
Sbjct: 7  NTPLSGLLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSAGASQGYSPEQKIGY 59


>gi|91224201|ref|ZP_01259464.1| flagellar basal-body rod protein C [Vibrio alginolyticus 12G01]
 gi|91191112|gb|EAS77378.1| flagellar basal-body rod protein C [Vibrio alginolyticus 12G01]
          Length = 144

 Score = 38.3 bits (87), Expect = 0.92,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 19/43 (44%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   + + + EM  M+  T+ F +   ++   +      +R
Sbjct: 97  GYVFYPDIDVVAEMADMMSATRSFETNVEVLANVKSMQQGLLR 139



 Score = 35.2 bits (79), Expect = 8.1,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 34/96 (35%), Gaps = 6/96 (6%)

Query: 10  AAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +A  A   RL+TVA N++N D V       ++ +K  F+ V    +   +      A  +
Sbjct: 12  SAMTAQTVRLNTVASNLANADAVSANPEDAYKALKPVFATVYQKTQMTTENGAYPNAEVR 71

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
                +         E +  L  D  +       ++
Sbjct: 72  IVDVVKNAGDAEKRFEPNNPLANDEGYVFYPDIDVV 107


>gi|83716884|ref|YP_438386.1| flagellar basal-body rod protein FlgB [Burkholderia thailandensis
           E264]
 gi|167614834|ref|ZP_02383469.1| flagellar basal-body rod protein FlgB [Burkholderia thailandensis
           Bt4]
 gi|83650709|gb|ABC34773.1| flagellar basal-body rod protein FlgB [Burkholderia thailandensis
           E264]
          Length = 124

 Score = 38.3 bits (87), Expect = 0.92,   Method: Composition-based stats.
 Identities = 15/94 (15%), Positives = 29/94 (30%), Gaps = 2/94 (2%)

Query: 10  AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69
            A     +R   +A N++N DT G++   + F   +              A         
Sbjct: 14  TALKLRAERTKIIASNLANLDTPGYQAQDLDFKRSLAEAAGGGAGARLGDAPAGGVTLGY 73

Query: 70  VGSFI--STGTELDFALEGDAWFALESPRGIILT 101
              +     G  ++  +E  A+        + LT
Sbjct: 74  RVPYQAAQDGNTVELGIEQAAFAQNAIDFQMSLT 107


>gi|309779444|ref|ZP_07674205.1| flagellar basal-body rod protein FlgB [Ralstonia sp. 5_7_47FAA]
 gi|308921685|gb|EFP67321.1| flagellar basal-body rod protein FlgB [Ralstonia sp. 5_7_47FAA]
          Length = 151

 Score = 38.3 bits (87), Expect = 0.92,   Method: Composition-based stats.
 Identities = 11/78 (14%), Positives = 24/78 (30%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   +A N++N DT  ++     F   +             +++         
Sbjct: 15 ALHLRSQRHQILASNIANADTPNYKARDFDFQSALQKAVGQQGGNSLPMSATAAGHLSVD 74

Query: 71 GSFISTGTELDFALEGDA 88
          G+     + +  +L    
Sbjct: 75 GAPAGDVSLMQASLSQQT 92


>gi|167579496|ref|ZP_02372370.1| flagellar hook-associated protein FlgK [Burkholderia thailandensis
           TXDOH]
          Length = 667

 Score = 38.3 bits (87), Expect = 0.92,   Method: Composition-based stats.
 Identities = 8/72 (11%), Positives = 20/72 (27%)

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
            G+V    +  S     +  +      + +     S  N   E   ++   Q + +   +
Sbjct: 592 AGYVNAIGNAASQLKASSAAQTALVGQITQAQQSVSGVNQNEEAANLMQYQQLYQANAKV 651

Query: 227 IDENEKSMLEAI 238
           I          +
Sbjct: 652 IQTANSVFQTVL 663



 Score = 37.9 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 27/80 (33%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           T  N+G++   A    L+T   N+SN  T G+   +  ++E  G   +           
Sbjct: 3  NTLMNLGVSGLNAALWGLTTTGQNISNAATPGYSVERPVYAEASGQYTSSGYLPQGVSTV 62

Query: 62 GKEYLSKEVGSFISTGTELD 81
            E    +  S      +  
Sbjct: 63 TVERQYNQYLSNQLNAAQTQ 82


>gi|163744345|ref|ZP_02151705.1| Flagellar hook-associated protein [Oceanibulbus indolifex HEL-45]
 gi|161381163|gb|EDQ05572.1| Flagellar hook-associated protein [Oceanibulbus indolifex HEL-45]
          Length = 468

 Score = 38.3 bits (87), Expect = 0.92,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 19/38 (50%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
          ++FNI  +     E R S VA N++N  T G+   +  
Sbjct: 5  SAFNIARSGLSTTEGRASLVAGNIANAQTEGYARREAV 42


>gi|134297201|ref|YP_001120936.1| flagellar basal body rod protein FlgB [Burkholderia vietnamiensis
          G4]
 gi|134140358|gb|ABO56101.1| flagellar basal-body rod protein FlgB [Burkholderia vietnamiensis
          G4]
          Length = 162

 Score = 38.3 bits (87), Expect = 0.92,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 18/43 (41%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
          A      R   ++ N++N DT G++   V F+  +       D
Sbjct: 15 ALDVRAYRQELLSSNIANADTPGYQARDVDFASALARSLKQTD 57


>gi|237753201|ref|ZP_04583681.1| flagellar basal-body rod protein [Helicobacter winghamensis ATCC
          BAA-430]
 gi|229375468|gb|EEO25559.1| flagellar basal-body rod protein [Helicobacter winghamensis ATCC
          BAA-430]
          Length = 144

 Score = 38.3 bits (87), Expect = 0.93,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 19/42 (45%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          A      R   +A N++N  T  +R   V F +++    +DI
Sbjct: 16 ALDHRALRRDMIASNIANVSTPMYRPKDVNFEQMMALKADDI 57


>gi|156934443|ref|YP_001438359.1| flagellar basal body rod protein FlgB [Cronobacter sakazakii ATCC
          BAA-894]
 gi|260597442|ref|YP_003210013.1| flagellar basal body rod protein FlgB [Cronobacter turicensis
          z3032]
 gi|156532697|gb|ABU77523.1| hypothetical protein ESA_02274 [Cronobacter sakazakii ATCC
          BAA-894]
 gi|260216619|emb|CBA29911.1| Flagellar basal-body rod protein flgB [Cronobacter turicensis
          z3032]
          Length = 137

 Score = 38.3 bits (87), Expect = 0.93,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 31/72 (43%), Gaps = 1/72 (1%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   +A N++N DT G++   + F+  +  + +   +      +     S+ +
Sbjct: 15 AINLRAQRQEILAANIANADTPGYQARDIDFASQLKKVMDQ-GRASGSTMTLAMTSSRHI 73

Query: 71 GSFISTGTELDF 82
           +  STG  LD 
Sbjct: 74 PAQASTGASLDL 85


>gi|84514836|ref|ZP_01002199.1| Flagellar proximal rod protein FlgB [Loktanella vestfoldensis
          SKA53]
 gi|84510995|gb|EAQ07449.1| Flagellar proximal rod protein FlgB [Loktanella vestfoldensis
          SKA53]
          Length = 105

 Score = 38.3 bits (87), Expect = 0.93,   Method: Composition-based stats.
 Identities = 7/33 (21%), Positives = 14/33 (42%)

Query: 21 TVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
           +A N++N  T G++   + F   +     D  
Sbjct: 1  MLASNIANAGTPGYKARDIDFDRELARQAGDSP 33


>gi|84388088|ref|ZP_00990984.1| flagellar basal body protein [Vibrio splendidus 12B01]
 gi|84377155|gb|EAP94025.1| flagellar basal body protein [Vibrio splendidus 12B01]
          Length = 131

 Score = 38.3 bits (87), Expect = 0.93,   Method: Composition-based stats.
 Identities = 6/38 (15%), Positives = 18/38 (47%)

Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
          E+    ++ N++  +T G++   + F + + A  +   
Sbjct: 20 ERNAEVLSTNIAQANTPGYKAKGLDFKKSLQAASSGAS 57


>gi|157959905|ref|YP_001499939.1| flagellar basal body rod protein FlgB [Shewanella pealeana ATCC
          700345]
 gi|157844905|gb|ABV85404.1| flagellar basal-body rod protein FlgB [Shewanella pealeana ATCC
          700345]
          Length = 116

 Score = 38.3 bits (87), Expect = 0.94,   Method: Composition-based stats.
 Identities = 7/53 (13%), Positives = 21/53 (39%)

Query: 21 TVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSF 73
           +A N++N +T G++   + F+ V+  + + +     +    +          
Sbjct: 25 MLAGNLANAETPGYKARDLDFNAVMTQLNSGMTPNQDYQVGYRIPHQTSADQN 77


>gi|83720978|ref|YP_440808.1| flagellar hook-associated protein FlgK [Burkholderia thailandensis
           E264]
 gi|167617593|ref|ZP_02386224.1| flagellar hook-associated protein FlgK [Burkholderia thailandensis
           Bt4]
 gi|257140541|ref|ZP_05588803.1| flagellar hook-associated protein FlgK [Burkholderia thailandensis
           E264]
 gi|83654803|gb|ABC38866.1| flagellar hook-associated protein 1 [Burkholderia thailandensis
           E264]
          Length = 667

 Score = 38.3 bits (87), Expect = 0.95,   Method: Composition-based stats.
 Identities = 8/72 (11%), Positives = 20/72 (27%)

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
            G+V    +  S     +  +      + +     S  N   E   ++   Q + +   +
Sbjct: 592 AGYVNAIGNAASQLKASSAAQTALVGQITQAQQSVSGVNQNEEAANLMQYQQLYQANAKV 651

Query: 227 IDENEKSMLEAI 238
           I          +
Sbjct: 652 IQTANSVFQTVL 663



 Score = 37.9 bits (86), Expect = 1.2,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 27/80 (33%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           T  N+G++   A    L+T   N+SN  T G+   +  ++E  G   +           
Sbjct: 3  NTLMNLGVSGLNAALWGLTTTGQNISNAATPGYSVERPVYAEASGQYTSSGYLPQGVSTV 62

Query: 62 GKEYLSKEVGSFISTGTELD 81
            E    +  S      +  
Sbjct: 63 TVERQYNQYLSNQLNAAQTQ 82


>gi|296126646|ref|YP_003633898.1| flagellar hook-associated protein FlgK [Brachyspira murdochii DSM
           12563]
 gi|296018462|gb|ADG71699.1| flagellar hook-associated protein FlgK [Brachyspira murdochii DSM
           12563]
          Length = 637

 Score = 38.3 bits (87), Expect = 0.95,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 24/72 (33%), Gaps = 5/72 (6%)

Query: 176 GISPNIPPTPLEDLSGVTVKRGFLED-----SNANSMYEMGQMIHLTQKFNSITTLIDEN 230
               +   T   +    TV   +LE      S  N   E+ QM      +N+   ++   
Sbjct: 565 ARIASRTETANAETEKQTVVMEYLERLRQSVSGVNLDEEVAQMAMYQHGYNASARVVSIM 624

Query: 231 EKSMLEAIRNIA 242
           ++ +   I  + 
Sbjct: 625 DQLLDVVINRMG 636


>gi|225863597|ref|YP_002748975.1| putative flagellar hook-associated protein [Bacillus cereus
           03BB102]
 gi|225789227|gb|ACO29444.1| putative flagellar hook-associated protein [Bacillus cereus
           03BB102]
          Length = 432

 Score = 38.3 bits (87), Expect = 0.95,   Method: Composition-based stats.
 Identities = 5/34 (14%), Positives = 11/34 (32%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
            N   EM  ++   + F + +  I    +     
Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427



 Score = 37.9 bits (86), Expect = 1.3,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 23/53 (43%)

Query: 6  NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
          N  L+  LA +  L T   N+SN  T G+    V +     +     +QKI +
Sbjct: 7  NTPLSGLLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSAGASQGYSPEQKIGY 59


>gi|157373210|ref|YP_001471810.1| flagellar basal body rod protein FlgB [Shewanella sediminis
          HAW-EB3]
 gi|157315584|gb|ABV34682.1| flagellar basal-body rod protein FlgB [Shewanella sediminis
          HAW-EB3]
          Length = 116

 Score = 38.3 bits (87), Expect = 0.95,   Method: Composition-based stats.
 Identities = 8/69 (11%), Positives = 22/69 (31%)

Query: 21 TVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTEL 80
           +A N++N +T G++   + F  ++  I   +     +    +               + 
Sbjct: 25 ILAGNLANAETPGYKAKDLNFQALMSGINAGMPASNQYEVGYRVPYQTSADQNTVELGKE 84

Query: 81 DFALEGDAW 89
                +A 
Sbjct: 85 QARYSQNAM 93


>gi|327398582|ref|YP_004339451.1| flagellar basal body rod protein [Hippea maritima DSM 10411]
 gi|327181211|gb|AEA33392.1| flagellar basal body rod protein [Hippea maritima DSM 10411]
          Length = 103

 Score = 38.3 bits (87), Expect = 0.96,   Method: Composition-based stats.
 Identities = 11/77 (14%), Positives = 23/77 (29%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
           N  L+       R    A+N++N +T  ++ + V   E  G              +   
Sbjct: 3  INTSLSGIKNAFYRQDITANNVANINTKNYKQVNVINQEAKGGGVEAKTTVSKAAPNRNG 62

Query: 65 YLSKEVGSFISTGTELD 81
                   ++  +  D
Sbjct: 63 NNVSLADQMVNQISNQD 79


>gi|259417088|ref|ZP_05741007.1| flagellar basal body rod protein FlgB [Silicibacter sp.
          TrichCH4B]
 gi|259345994|gb|EEW57808.1| flagellar basal body rod protein FlgB [Silicibacter sp.
          TrichCH4B]
          Length = 138

 Score = 38.3 bits (87), Expect = 0.97,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIKNDID 53
             FNI  +      +R + V++N++N DT G+    +K F EV  A +   D
Sbjct: 14 LNVFNIAYSMATHAGKRQALVSENIANADTPGYLAKDIKPFKEVFAAGEAQGD 66


>gi|327441058|dbj|BAK17423.1| flagellar basal body protein [Solibacillus silvestris StLB046]
          Length = 130

 Score = 38.3 bits (87), Expect = 0.98,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 18/25 (72%)

Query: 21 TVADNMSNTDTVGFRTIKVKFSEVV 45
          T+A N++N DT  ++T +V F +V+
Sbjct: 24 TIAQNIANVDTPNYKTKEVSFKDVL 48


>gi|170703622|ref|ZP_02894363.1| flagellar hook-associated protein FlgK [Burkholderia ambifaria
          IOP40-10]
 gi|170131468|gb|EDT00055.1| flagellar hook-associated protein FlgK [Burkholderia ambifaria
          IOP40-10]
          Length = 665

 Score = 38.3 bits (87), Expect = 0.98,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 25/69 (36%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           T  N+G++   A    L+T   N+SN  T G+   +  ++E  G   +           
Sbjct: 3  NTLMNLGVSGLNAALWGLTTTGQNISNAATPGYSVERPVYAEASGQYTSSGYMPQGVNTV 62

Query: 62 GKEYLSKEV 70
            +    + 
Sbjct: 63 TVQRQYSQY 71



 Score = 36.0 bits (81), Expect = 4.9,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 11/37 (29%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N   E   ++   Q + +   +I          +
Sbjct: 625 SGVNQNEEAANLMQYQQLYQANAKVIQTAATLFQTVL 661


>gi|148554192|ref|YP_001261774.1| flagellar basal-body rod protein FlgB [Sphingomonas wittichii
          RW1]
 gi|148499382|gb|ABQ67636.1| flagellar basal-body rod protein FlgB [Sphingomonas wittichii
          RW1]
          Length = 115

 Score = 38.3 bits (87), Expect = 0.98,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 20/44 (45%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54
          A     QRLS +A N++N  T  ++   + F + +    + +  
Sbjct: 12 ALELRSQRLSMLASNIANAATPNYKARDIDFQKALSDATDGMSA 55


>gi|301053275|ref|YP_003791486.1| flagellar hook-associated protein [Bacillus anthracis CI]
 gi|300375444|gb|ADK04348.1| flagellar hook-associated protein [Bacillus cereus biovar anthracis
           str. CI]
          Length = 432

 Score = 38.3 bits (87), Expect = 0.99,   Method: Composition-based stats.
 Identities = 5/34 (14%), Positives = 11/34 (32%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
            N   EM  ++   + F + +  I    +     
Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427



 Score = 37.5 bits (85), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 23/53 (43%)

Query: 6  NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
          N  L+  LA +  L T   N+SN  T G+    V +     +     +QKI +
Sbjct: 7  NTPLSGLLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSAGASQGYSPEQKIGY 59


>gi|229121290|ref|ZP_04250521.1| Flagellar hook-associated protein FlgK [Bacillus cereus 95/8201]
 gi|228662135|gb|EEL17744.1| Flagellar hook-associated protein FlgK [Bacillus cereus 95/8201]
          Length = 432

 Score = 38.3 bits (87), Expect = 0.99,   Method: Composition-based stats.
 Identities = 5/34 (14%), Positives = 11/34 (32%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
            N   EM  ++   + F + +  I    +     
Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427



 Score = 37.5 bits (85), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 23/53 (43%)

Query: 6  NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
          N  L+  LA +  L T   N+SN  T G+    V +     +     +QKI +
Sbjct: 7  NTPLSGLLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSAGASQGYSPEQKIGY 59


>gi|30261738|ref|NP_844115.1| flagellar hook-associated protein FlgK [Bacillus anthracis str.
           Ames]
 gi|47526956|ref|YP_018305.1| flagellar hook-associated protein FlgK [Bacillus anthracis str.
           'Ames Ancestor']
 gi|49184566|ref|YP_027818.1| flagellar hook-associated protein FlgK [Bacillus anthracis str.
           Sterne]
 gi|65319005|ref|ZP_00391964.1| COG1256: Flagellar hook-associated protein [Bacillus anthracis str.
           A2012]
 gi|167633324|ref|ZP_02391649.1| putative flagellar hook-associated protein [Bacillus anthracis str.
           A0442]
 gi|167639070|ref|ZP_02397343.1| putative flagellar hook-associated protein [Bacillus anthracis str.
           A0193]
 gi|170686189|ref|ZP_02877411.1| putative flagellar hook-associated protein [Bacillus anthracis str.
           A0465]
 gi|170706527|ref|ZP_02896987.1| putative flagellar hook-associated protein [Bacillus anthracis str.
           A0389]
 gi|177650561|ref|ZP_02933528.1| putative flagellar hook-associated protein [Bacillus anthracis str.
           A0174]
 gi|190566328|ref|ZP_03019246.1| putative flagellar hook-associated protein [Bacillus anthracis
           Tsiankovskii-I]
 gi|229601207|ref|YP_002866138.1| putative flagellar hook-associated protein [Bacillus anthracis str.
           A0248]
 gi|254683226|ref|ZP_05147087.1| flagellar hook-associated protein FlgK [Bacillus anthracis str.
           CNEVA-9066]
 gi|254734579|ref|ZP_05192291.1| flagellar hook-associated protein FlgK [Bacillus anthracis str.
           Western North America USA6153]
 gi|254740987|ref|ZP_05198675.1| flagellar hook-associated protein FlgK [Bacillus anthracis str.
           Kruger B]
 gi|254759766|ref|ZP_05211790.1| flagellar hook-associated protein FlgK [Bacillus anthracis str.
           Australia 94]
 gi|30255966|gb|AAP25601.1| putative flagellar hook-associated protein [Bacillus anthracis str.
           Ames]
 gi|47502104|gb|AAT30780.1| putative flagellar hook-associated protein [Bacillus anthracis str.
           'Ames Ancestor']
 gi|49178493|gb|AAT53869.1| flagellar hook-associated protein, putative [Bacillus anthracis
           str. Sterne]
 gi|167512860|gb|EDR88233.1| putative flagellar hook-associated protein [Bacillus anthracis str.
           A0193]
 gi|167531362|gb|EDR94040.1| putative flagellar hook-associated protein [Bacillus anthracis str.
           A0442]
 gi|170128625|gb|EDS97492.1| putative flagellar hook-associated protein [Bacillus anthracis str.
           A0389]
 gi|170669886|gb|EDT20627.1| putative flagellar hook-associated protein [Bacillus anthracis str.
           A0465]
 gi|172083705|gb|EDT68765.1| putative flagellar hook-associated protein [Bacillus anthracis str.
           A0174]
 gi|190562463|gb|EDV16430.1| putative flagellar hook-associated protein [Bacillus anthracis
           Tsiankovskii-I]
 gi|229265615|gb|ACQ47252.1| putative flagellar hook-associated protein [Bacillus anthracis str.
           A0248]
          Length = 432

 Score = 38.3 bits (87), Expect = 0.99,   Method: Composition-based stats.
 Identities = 5/34 (14%), Positives = 11/34 (32%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
            N   EM  ++   + F + +  I    +     
Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427



 Score = 37.5 bits (85), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 23/53 (43%)

Query: 6  NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
          N  L+  LA +  L T   N+SN  T G+    V +     +     +QKI +
Sbjct: 7  NTPLSGLLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSAGASQGYSPEQKIGY 59


>gi|163803166|ref|ZP_02197049.1| flagellar basal-body rod protein B [Vibrio sp. AND4]
 gi|159173066|gb|EDP57899.1| flagellar basal-body rod protein B [Vibrio sp. AND4]
          Length = 120

 Score = 38.3 bits (87), Expect = 1.0,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 30/85 (35%), Gaps = 1/85 (1%)

Query: 17  QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76
           QR   +A N++N DT G+    + F+ V+  +      +       +   S    +    
Sbjct: 21  QRTKVLASNLANVDTPGYLAKDLSFTTVMDQVSASSVNEPVPKFRVEAQYSMPYQNSK-D 79

Query: 77  GTELDFALEGDAWFALESPRGIILT 101
           G  ++  +E   +          LT
Sbjct: 80  GNTVELGVEQAKFTQNNMDFQTSLT 104


>gi|172061965|ref|YP_001809617.1| flagellar hook-associated protein FlgK [Burkholderia ambifaria
          MC40-6]
 gi|171994482|gb|ACB65401.1| flagellar hook-associated protein FlgK [Burkholderia ambifaria
          MC40-6]
          Length = 665

 Score = 38.3 bits (87), Expect = 1.0,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 25/69 (36%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           T  N+G++   A    L+T   N+SN  T G+   +  ++E  G   +           
Sbjct: 3  NTLMNLGVSGLNAALWGLTTTGQNISNAATPGYSVERPVYAEASGQYTSSGYMPQGVNTV 62

Query: 62 GKEYLSKEV 70
            +    + 
Sbjct: 63 TVQRQYSQY 71



 Score = 36.0 bits (81), Expect = 5.0,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 11/37 (29%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N   E   ++   Q + +   +I          +
Sbjct: 625 SGVNQNEEAANLMQYQQLYQANAKVIQTAATLFQTVL 661


>gi|293408365|ref|ZP_06652204.1| flagellar basal-body rod protein FlgC [Escherichia coli B354]
 gi|291471543|gb|EFF14026.1| flagellar basal-body rod protein FlgC [Escherichia coli B354]
          Length = 143

 Score = 38.3 bits (87), Expect = 1.0,   Method: Composition-based stats.
 Identities = 4/35 (11%), Positives = 15/35 (42%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            N + +M  M+  ++ F +   +++  +      +
Sbjct: 104 VNVVEQMADMMSASRDFETNVDVLNNVKSMQQSLL 138



 Score = 36.4 bits (82), Expect = 3.7,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 6/45 (13%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVV 45
          I  +A  A   RL+TVA N++N +         ++     F+ V 
Sbjct: 9  ISGSAMTAQTLRLNTVASNLANAEAPAGSEAQAYKARSPVFAAVY 53


>gi|297569163|ref|YP_003690507.1| flagellar basal-body rod protein FlgB [Desulfurivibrio
          alkaliphilus AHT2]
 gi|296925078|gb|ADH85888.1| flagellar basal-body rod protein FlgB [Desulfurivibrio
          alkaliphilus AHT2]
          Length = 128

 Score = 38.3 bits (87), Expect = 1.0,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 19/44 (43%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54
          +     +R   +  N++N +T G++     F  V+  + +   Q
Sbjct: 17 SLNLRNERQGMIQSNIANLETPGYKVQDFPFERVMAQVVSGQGQ 60


>gi|325982375|ref|YP_004294777.1| flagellar basal-body rod protein FlgB [Nitrosomonas sp. AL212]
 gi|325531894|gb|ADZ26615.1| flagellar basal-body rod protein FlgB [Nitrosomonas sp. AL212]
          Length = 136

 Score = 38.3 bits (87), Expect = 1.0,   Method: Composition-based stats.
 Identities = 8/64 (12%), Positives = 20/64 (31%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69
           A      R   ++ N++N DT  F+   + F+ ++    +          +    +   
Sbjct: 14 TALSLRVARQELLSSNVANADTPNFKAKDIDFASMLHEKLSSTPSLKKVSLNTTSLMHIN 73

Query: 70 VGSF 73
              
Sbjct: 74 SSVP 77


>gi|167835119|ref|ZP_02462002.1| flagellar hook-associated protein FlgK [Burkholderia thailandensis
           MSMB43]
          Length = 667

 Score = 38.3 bits (87), Expect = 1.0,   Method: Composition-based stats.
 Identities = 8/72 (11%), Positives = 20/72 (27%)

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
            G+V    +  S     +  +      + +     S  N   E   ++   Q + +   +
Sbjct: 592 AGYVNAIGNAASQLKASSAAQTALVGQITQAQQSVSGVNQNEEAANLMQYQQLYQANAKV 651

Query: 227 IDENEKSMLEAI 238
           I          +
Sbjct: 652 IQTANSVFQTVL 663



 Score = 37.9 bits (86), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 27/80 (33%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           T  N+G++   A    L+T   N+SN  T G+   +  ++E  G   +           
Sbjct: 3  NTLMNLGVSGLNAALWGLTTTGQNISNAATPGYSVERPVYAEASGQYTSSGYLPQGVSTV 62

Query: 62 GKEYLSKEVGSFISTGTELD 81
            +    +  S      +  
Sbjct: 63 TVQRQYNQYLSDQLNAAQTQ 82


>gi|170734377|ref|YP_001766324.1| flagellar basal body rod protein FlgB [Burkholderia cenocepacia
          MC0-3]
 gi|169817619|gb|ACA92202.1| flagellar basal-body rod protein FlgB [Burkholderia cenocepacia
          MC0-3]
          Length = 162

 Score = 38.3 bits (87), Expect = 1.0,   Method: Composition-based stats.
 Identities = 11/73 (15%), Positives = 26/73 (35%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A      R   ++ N++N DT G++   V F+  +          ++   + +  +++  
Sbjct: 15 ALDVRAYRQELLSSNIANADTPGYQARDVDFASTLARSLKQTSGGLAPSNAAQLPMTQPA 74

Query: 71 GSFISTGTELDFA 83
          G           A
Sbjct: 75 GVTSGMSMVSTAA 87


>gi|49477285|ref|YP_035858.1| flagellar hook-associated protein FlgK [Bacillus thuringiensis
           serovar konkukian str. 97-27]
 gi|118477174|ref|YP_894325.1| flagellar hook-associated protein FlgK [Bacillus thuringiensis str.
           Al Hakam]
 gi|196033487|ref|ZP_03100899.1| putative flagellar hook-associated protein [Bacillus cereus W]
 gi|196038896|ref|ZP_03106203.1| putative flagellar hook-associated protein [Bacillus cereus
           NVH0597-99]
 gi|229090699|ref|ZP_04221932.1| Flagellar hook-associated protein FlgK [Bacillus cereus Rock3-42]
 gi|300117343|ref|ZP_07055133.1| flagellar hook-associated protein FlgK [Bacillus cereus SJ1]
 gi|49328841|gb|AAT59487.1| flagellar hook-associated protein 1 [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|118416399|gb|ABK84818.1| flagellar hook-associated protein 1 [Bacillus thuringiensis str. Al
           Hakam]
 gi|195993921|gb|EDX57877.1| putative flagellar hook-associated protein [Bacillus cereus W]
 gi|196030041|gb|EDX68641.1| putative flagellar hook-associated protein [Bacillus cereus
           NVH0597-99]
 gi|228692641|gb|EEL46367.1| Flagellar hook-associated protein FlgK [Bacillus cereus Rock3-42]
 gi|298725178|gb|EFI65830.1| flagellar hook-associated protein FlgK [Bacillus cereus SJ1]
          Length = 432

 Score = 38.3 bits (87), Expect = 1.0,   Method: Composition-based stats.
 Identities = 5/34 (14%), Positives = 11/34 (32%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
            N   EM  ++   + F + +  I    +     
Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427



 Score = 37.5 bits (85), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 23/53 (43%)

Query: 6  NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
          N  L+  LA +  L T   N+SN  T G+    V +     +     +QKI +
Sbjct: 7  NTPLSGLLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSAGASQGYSPEQKIGY 59


>gi|52143720|ref|YP_083109.1| flagellar hook-associated protein FlgK [Bacillus cereus E33L]
 gi|51977189|gb|AAU18739.1| flagellar hook-associated protein 1 [Bacillus cereus E33L]
          Length = 432

 Score = 38.3 bits (87), Expect = 1.0,   Method: Composition-based stats.
 Identities = 5/34 (14%), Positives = 11/34 (32%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
            N   EM  ++   + F + +  I    +     
Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427



 Score = 37.5 bits (85), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 23/53 (43%)

Query: 6  NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
          N  L+  LA +  L T   N+SN  T G+    V +     +     +QKI +
Sbjct: 7  NTPLSGLLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSAGASQGYSPEQKIGY 59


>gi|328545508|ref|YP_004305617.1| flagellar basal-body rod protein B [polymorphum gilvum
          SL003B-26A1]
 gi|326415249|gb|ADZ72312.1| Flagellar basal-body rod protein B [Polymorphum gilvum
          SL003B-26A1]
          Length = 126

 Score = 38.3 bits (87), Expect = 1.0,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)

Query: 15 LEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIK 49
          L  R +T+A+N++N+DT GF    V  F+ V    +
Sbjct: 17 LSVRQATIAENIANSDTPGFAARDVVPFASVFDQTR 52


>gi|212637782|ref|YP_002314307.1| flagellar basal body rod protein FlgB [Shewanella piezotolerans
          WP3]
 gi|212559266|gb|ACJ31720.1| Flagellar basal-body rod protein FlgB [Shewanella piezotolerans
          WP3]
          Length = 116

 Score = 38.3 bits (87), Expect = 1.0,   Method: Composition-based stats.
 Identities = 10/69 (14%), Positives = 24/69 (34%)

Query: 21 TVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTEL 80
           +A N++N +T G++   + F  V+  +   +     + AS +               + 
Sbjct: 25 MLAGNLANAETPGYKARDLDFKAVMSQLNAGMSPSRDYQASYRIPYQSSADQNTVELGKE 84

Query: 81 DFALEGDAW 89
                +A 
Sbjct: 85 QARYSQNAM 93


>gi|196045090|ref|ZP_03112323.1| putative flagellar hook-associated protein [Bacillus cereus
           03BB108]
 gi|228945341|ref|ZP_04107696.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|196024092|gb|EDX62766.1| putative flagellar hook-associated protein [Bacillus cereus
           03BB108]
 gi|228814313|gb|EEM60579.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
          Length = 432

 Score = 38.3 bits (87), Expect = 1.0,   Method: Composition-based stats.
 Identities = 5/34 (14%), Positives = 11/34 (32%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
            N   EM  ++   + F + +  I    +     
Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427



 Score = 37.5 bits (85), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 23/53 (43%)

Query: 6  NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
          N  L+  LA +  L T   N+SN  T G+    V +     +     +QKI +
Sbjct: 7  NTPLSGLLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSAGASQGYSPEQKIGY 59


>gi|218902853|ref|YP_002450687.1| putative flagellar hook-associated protein [Bacillus cereus AH820]
 gi|218537195|gb|ACK89593.1| putative flagellar hook-associated protein [Bacillus cereus AH820]
          Length = 432

 Score = 38.3 bits (87), Expect = 1.0,   Method: Composition-based stats.
 Identities = 5/34 (14%), Positives = 11/34 (32%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
            N   EM  ++   + F + +  I    +     
Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427



 Score = 37.5 bits (85), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 23/53 (43%)

Query: 6  NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
          N  L+  LA +  L T   N+SN  T G+    V +     +     +QKI +
Sbjct: 7  NTPLSGLLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSAGASQGYSPEQKIGY 59


>gi|255608368|ref|XP_002538891.1| Flagellar basal-body rod protein flgB, putative [Ricinus
          communis]
 gi|223509946|gb|EEF23492.1| Flagellar basal-body rod protein flgB, putative [Ricinus
          communis]
          Length = 156

 Score = 38.3 bits (87), Expect = 1.0,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 19/67 (28%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69
          AA     QR   +A N++N DT  ++   + F   + +                E     
Sbjct: 25 AALRVRNQRQELLASNIANADTPQYKARDIDFQSAMQSALQQSAGVGPATQPASEMQQTN 84

Query: 70 VGSFIST 76
                 
Sbjct: 85 NAHMNGN 91


>gi|167770235|ref|ZP_02442288.1| hypothetical protein ANACOL_01578 [Anaerotruncus colihominis DSM
           17241]
 gi|167667557|gb|EDS11687.1| hypothetical protein ANACOL_01578 [Anaerotruncus colihominis DSM
           17241]
          Length = 520

 Score = 38.3 bits (87), Expect = 1.0,   Method: Composition-based stats.
 Identities = 6/43 (13%), Positives = 16/43 (37%)

Query: 200 EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           E S      E+  M+   +   + + L+   ++++   I    
Sbjct: 474 EVSGVVMDEEVANMMLYQKSLQAASRLMTTLDEALDVLINKTG 516


>gi|153001475|ref|YP_001367156.1| flagellar basal body rod protein FlgB [Shewanella baltica OS185]
 gi|160876206|ref|YP_001555522.1| flagellar basal body rod protein FlgB [Shewanella baltica OS195]
 gi|217972595|ref|YP_002357346.1| flagellar basal body rod protein FlgB [Shewanella baltica OS223]
 gi|304409981|ref|ZP_07391600.1| flagellar basal-body rod protein FlgB [Shewanella baltica OS183]
 gi|307302306|ref|ZP_07582064.1| flagellar basal-body rod protein FlgB [Shewanella baltica BA175]
 gi|151366093|gb|ABS09093.1| flagellar basal-body rod protein FlgB [Shewanella baltica OS185]
 gi|160861728|gb|ABX50262.1| flagellar basal-body rod protein FlgB [Shewanella baltica OS195]
 gi|217497730|gb|ACK45923.1| flagellar basal-body rod protein FlgB [Shewanella baltica OS223]
 gi|304351390|gb|EFM15789.1| flagellar basal-body rod protein FlgB [Shewanella baltica OS183]
 gi|306914344|gb|EFN44765.1| flagellar basal-body rod protein FlgB [Shewanella baltica BA175]
 gi|315268396|gb|ADT95249.1| flagellar basal-body rod protein FlgB [Shewanella baltica OS678]
          Length = 134

 Score = 38.3 bits (87), Expect = 1.0,   Method: Composition-based stats.
 Identities = 9/32 (28%), Positives = 15/32 (46%), Gaps = 2/32 (6%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFS 42
             A   R   ++ N++N DT  ++   V FS
Sbjct: 17 GIRAQ--RAEVISSNIANADTPHYKARDVDFS 46


>gi|206558976|ref|YP_002229736.1| flagellar hook-associated protein FlgK [Burkholderia cenocepacia
          J2315]
 gi|198035013|emb|CAR50885.1| flagellar hook-associated protein 1 (HAP1) [Burkholderia
          cenocepacia J2315]
          Length = 643

 Score = 38.3 bits (87), Expect = 1.0,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 28/80 (35%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           T  N+G++   A    L+T   N+SN  T G+   +  ++E  G   +           
Sbjct: 3  NTLMNLGVSGLNAALWGLTTTGQNISNAATPGYSVERPVYAEASGQYTSSGYMPQGVNTV 62

Query: 62 GKEYLSKEVGSFISTGTELD 81
            +    +  S    G +  
Sbjct: 63 TVQRQYSQYLSDQLNGAQTQ 82



 Score = 36.0 bits (81), Expect = 4.1,   Method: Composition-based stats.
 Identities = 7/72 (9%), Positives = 19/72 (26%)

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
             +V    +  S     +  +      + +     S  N   E   ++   Q + +   +
Sbjct: 568 ANYVNGIGNTASQLKSSSAAQTALVGQITQAQQSVSGVNQNEEAANLMQYQQLYQANAKV 627

Query: 227 IDENEKSMLEAI 238
           I          +
Sbjct: 628 IQTASTLFQTVL 639


>gi|24374761|ref|NP_718804.1| flagellar basal body rod protein FlgB [Shewanella oneidensis
          MR-1]
 gi|24349427|gb|AAN56248.1|AE015762_5 flagellar basal-body rod protein FlgB [Shewanella oneidensis
          MR-1]
          Length = 134

 Score = 38.3 bits (87), Expect = 1.0,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 23/52 (44%)

Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLS 67
           +R   +A N++N DT  ++   V FS  +   K    Q+ S   +G E   
Sbjct: 20 SERAEVLASNIANADTPHYKARDVDFSAALNVAKTQQQQRNSLEMTGDEQHF 71


>gi|254488055|ref|ZP_05101260.1| flagellar hook-associated protein FlgK [Roseobacter sp. GAI101]
 gi|214044924|gb|EEB85562.1| flagellar hook-associated protein FlgK [Roseobacter sp. GAI101]
          Length = 490

 Score = 38.3 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 6/36 (16%), Positives = 18/36 (50%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +S  E+ +++ + Q F +   ++   ++ M   +R
Sbjct: 454 VDSDQELQKLLLVEQAFAANARMVQAVDEMMQTLLR 489



 Score = 36.8 bits (83), Expect = 3.0,   Method: Composition-based stats.
 Identities = 7/31 (22%), Positives = 14/31 (45%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGF 34
          + +  +    A  +    +A N+SN  T G+
Sbjct: 12 ALSSAMQGLRAAGRGSEVIASNLSNALTPGY 42


>gi|212634345|ref|YP_002310870.1| flagellar basal body rod protein FlgB [Shewanella piezotolerans
          WP3]
 gi|212555829|gb|ACJ28283.1| Flagellar basal-body rod protein FlgB [Shewanella piezotolerans
          WP3]
          Length = 132

 Score = 38.3 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 10/52 (19%), Positives = 24/52 (46%)

Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLS 67
           QR   ++ N++N DT  ++   V F++ + + ++         + GK +  
Sbjct: 20 SQRAEVLSSNIANADTPNYKARDVDFAKAMNSAQSRQSGLAMAKSDGKHFDM 71


>gi|320107049|ref|YP_004182639.1| flagellar hook-associated protein FlgK [Terriglobus saanensis
           SP1PR4]
 gi|319925570|gb|ADV82645.1| flagellar hook-associated protein FlgK [Terriglobus saanensis
           SP1PR4]
          Length = 467

 Score = 38.3 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/88 (13%), Positives = 26/88 (29%), Gaps = 2/88 (2%)

Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMG 211
           GK++      S   S           +         +L+  T +R  L  S  +   E  
Sbjct: 374 GKIVGGETPASFFGSFLTQLGTTISGATTDETVTAAELTQATAQRNAL--SGVSLDEEAS 431

Query: 212 QMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +    + + +   +    ++    AI 
Sbjct: 432 NLTEYQRSYQAAAKVFSIVDEMFASAIN 459


>gi|228926774|ref|ZP_04089842.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|228832887|gb|EEM78456.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
          Length = 432

 Score = 38.3 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 5/34 (14%), Positives = 11/34 (32%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
            N   EM  ++   + F + +  I    +     
Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427



 Score = 37.5 bits (85), Expect = 1.5,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 23/53 (43%)

Query: 6  NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
          N  L+  LA +  L T   N+SN  T G+    V +     +     +QKI +
Sbjct: 7  NTPLSGLLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSAGASQGYSPEQKIGY 59


>gi|171322357|ref|ZP_02911181.1| flagellar hook-associated protein FlgK [Burkholderia ambifaria
          MEX-5]
 gi|171092319|gb|EDT37688.1| flagellar hook-associated protein FlgK [Burkholderia ambifaria
          MEX-5]
          Length = 665

 Score = 38.3 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 25/69 (36%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           T  N+G++   A    L+T   N+SN  T G+   +  ++E  G   +           
Sbjct: 3  NTLMNLGVSGLNAALWGLTTTGQNISNAATPGYSVERPVYAEASGQYTSSGYMPQGVNTV 62

Query: 62 GKEYLSKEV 70
            +    + 
Sbjct: 63 TVQRQYSQY 71



 Score = 36.0 bits (81), Expect = 5.1,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 11/37 (29%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N   E   ++   Q + +   +I          +
Sbjct: 625 SGVNQNEEAANLMQYQQLYQANAKVIQTAATLFQTVL 661


>gi|160880852|ref|YP_001559820.1| flagellar basal-body rod protein FlgB [Clostridium
          phytofermentans ISDg]
 gi|160429518|gb|ABX43081.1| flagellar basal-body rod protein FlgB [Clostridium
          phytofermentans ISDg]
          Length = 128

 Score = 37.9 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 6/28 (21%), Positives = 15/28 (53%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVV 45
          R   +++N++N DT  ++   + F   +
Sbjct: 23 RQELLSNNLANNDTPNYKRKDLNFESYL 50


>gi|126175149|ref|YP_001051298.1| flagellar basal body rod protein FlgB [Shewanella baltica OS155]
 gi|125998354|gb|ABN62429.1| flagellar basal-body rod protein FlgB [Shewanella baltica OS155]
          Length = 134

 Score = 37.9 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 9/32 (28%), Positives = 15/32 (46%), Gaps = 2/32 (6%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFS 42
             A   R   ++ N++N DT  ++   V FS
Sbjct: 17 GIRAQ--RAEVISSNIANADTPHYKARDVDFS 46


>gi|254227980|ref|ZP_04921410.1| flagellar basal-body rod protein FlgB [Vibrio sp. Ex25]
 gi|262396038|ref|YP_003287891.1| flagellar basal-body rod protein FlgB [Vibrio sp. Ex25]
 gi|151939476|gb|EDN58304.1| flagellar basal-body rod protein FlgB [Vibrio sp. Ex25]
 gi|262339632|gb|ACY53426.1| flagellar basal-body rod protein FlgB [Vibrio sp. Ex25]
          Length = 120

 Score = 37.9 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 30/85 (35%), Gaps = 1/85 (1%)

Query: 17  QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76
           QR   +A N++N DT G+    + F+ V+  +      K       +   S    +    
Sbjct: 21  QRTKVLASNLANVDTPGYLAKDLSFTTVMNQVAAGGVNKPVPKFQVQAQYSVPYQNSK-D 79

Query: 77  GTELDFALEGDAWFALESPRGIILT 101
           G  ++  +E   +          LT
Sbjct: 80  GNTVELGVEQAKFTQNNMDFQTSLT 104


>gi|323492341|ref|ZP_08097494.1| flagellar basal body rod protein FlgB [Vibrio brasiliensis LMG
           20546]
 gi|323313388|gb|EGA66499.1| flagellar basal body rod protein FlgB [Vibrio brasiliensis LMG
           20546]
          Length = 120

 Score = 37.9 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 30/85 (35%), Gaps = 1/85 (1%)

Query: 17  QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76
           QR   +A N++N DT G+    + F+ V+  +      K           S    +    
Sbjct: 21  QRTKVLASNLANVDTPGYLAKDLSFTTVMNQMAPQSVHKPVPQLQISSQYSIPYQNSK-D 79

Query: 77  GTELDFALEGDAWFALESPRGIILT 101
           G  ++ ++E   +          LT
Sbjct: 80  GNTVELSVEQGKFTQNNMDFQTSLT 104


>gi|161526179|ref|YP_001581191.1| flagellar hook-associated protein FlgK [Burkholderia multivorans
          ATCC 17616]
 gi|189349105|ref|YP_001944733.1| flagellar hook-associated protein FlgK [Burkholderia multivorans
          ATCC 17616]
 gi|160343608|gb|ABX16694.1| flagellar hook-associated protein FlgK [Burkholderia multivorans
          ATCC 17616]
 gi|189333127|dbj|BAG42197.1| flagellar hook-associated protein 1 [Burkholderia multivorans
          ATCC 17616]
          Length = 659

 Score = 37.9 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 23/51 (45%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
           T  N+G++   A    L+T   N+SN  T G+   +  ++E  G   +  
Sbjct: 3  NTLMNLGVSGLNAALWGLTTTGQNISNAATPGYSVERPVYAEASGQYTSSG 53



 Score = 36.0 bits (81), Expect = 4.9,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 11/37 (29%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N   E   ++   Q + +   +I          +
Sbjct: 619 SGVNQNEEAANLMQYQQLYQANAKVIQTAATLFQTVL 655


>gi|228914317|ref|ZP_04077932.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|228845311|gb|EEM90347.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
          Length = 420

 Score = 37.9 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 5/34 (14%), Positives = 11/34 (32%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
            N   EM  ++   + F + +  I    +     
Sbjct: 382 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 415


>gi|229183930|ref|ZP_04311146.1| Flagellar hook-associated protein FlgK [Bacillus cereus BGSC 6E1]
 gi|228599582|gb|EEK57186.1| Flagellar hook-associated protein FlgK [Bacillus cereus BGSC 6E1]
          Length = 420

 Score = 37.9 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 5/34 (14%), Positives = 11/34 (32%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
            N   EM  ++   + F + +  I    +     
Sbjct: 382 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 415


>gi|284989558|ref|YP_003408112.1| hypothetical protein Gobs_0980 [Geodermatophilus obscurus DSM
           43160]
 gi|284062803|gb|ADB73741.1| protein of unknown function DUF1078 domain protein
           [Geodermatophilus obscurus DSM 43160]
          Length = 134

 Score = 37.9 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 5/43 (11%), Positives = 20/43 (46%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           G++   + +   +M Q+I   + + +   +++    +   A++
Sbjct: 88  GYVRYPDIDLGDQMTQLIMAQRGYQANLAVVERATTAYQAALQ 130



 Score = 35.2 bits (79), Expect = 7.0,   Method: Composition-based stats.
 Identities = 8/27 (29%), Positives = 14/27 (51%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTD 30
          S  I  +  L   + L  V+DN++N +
Sbjct: 6  SLGISGSGLLVHRKWLDAVSDNIANIN 32


>gi|260431753|ref|ZP_05785724.1| flagellar basal body rod protein FlgB [Silicibacter
          lacuscaerulensis ITI-1157]
 gi|260415581|gb|EEX08840.1| flagellar basal body rod protein FlgB [Silicibacter
          lacuscaerulensis ITI-1157]
          Length = 129

 Score = 37.9 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 19/39 (48%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
             F +  A      QR + ++ NM+N DT G+R   ++
Sbjct: 5  LNVFKVAYAMATHAGQRQAVISRNMANADTPGYRARDIE 43


>gi|34557691|ref|NP_907506.1| hypothetical protein WS1332 [Wolinella succinogenes DSM 1740]
 gi|34483408|emb|CAE10406.1| hypothetical protein WS1332 [Wolinella succinogenes]
          Length = 94

 Score = 37.9 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 9/57 (15%), Positives = 19/57 (33%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
            I  ++  A    ++  + N++N +T GF  ++    E           K      
Sbjct: 1  MQINASSIQAHSSWMNNSSHNVANVNTQGFGALQTNLEESPTQGITANSSKGEGATD 57


>gi|316936120|ref|YP_004111102.1| flagellar hook-associated protein FlgK [Rhodopseudomonas
          palustris DX-1]
 gi|315603834|gb|ADU46369.1| flagellar hook-associated protein FlgK [Rhodopseudomonas
          palustris DX-1]
          Length = 587

 Score = 37.9 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 8/28 (28%), Positives = 16/28 (57%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTVGF 34
          I L + +  + ++S  + N+SN  T G+
Sbjct: 9  IALGSLMTTQVQISVTSSNISNASTTGY 36


>gi|89072308|ref|ZP_01158887.1| putative flagellar hook-associated protein [Photobacterium sp.
           SKA34]
 gi|89051840|gb|EAR57292.1| putative flagellar hook-associated protein [Photobacterium sp.
           SKA34]
          Length = 286

 Score = 37.9 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 15/40 (37%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           S  NS  E   ++  T  + +   +I    +     +R +
Sbjct: 247 SAVNSDEEAANLMTFTNAYQANMKVISTANELFDSVLRLL 286


>gi|332311130|gb|EGJ24225.1| Flagellar hook-associated protein 1 [Listeria monocytogenes str.
           Scott A]
          Length = 494

 Score = 37.9 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 5/35 (14%), Positives = 12/35 (34%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            N   EM  ++     + + T  ++     M   +
Sbjct: 457 VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALL 491


>gi|239909137|ref|YP_002955879.1| flagellar basal-body rod protein FlgB [Desulfovibrio magneticus
          RS-1]
 gi|239799004|dbj|BAH77993.1| flagellar basal-body rod protein FlgB [Desulfovibrio magneticus
          RS-1]
          Length = 136

 Score = 37.9 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 10/71 (14%), Positives = 26/71 (36%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
              ++R + V  N++N D   F+   ++F + + A  N   +       G    +    
Sbjct: 16 MDLHQERQNVVMSNLANQDVPAFKARTLEFEQELQAALNIDGRGKMTRTQGGHMPTVFNA 75

Query: 72 SFISTGTELDF 82
          +      ++ +
Sbjct: 76 AGFEGNIDMGW 86


>gi|325983735|ref|YP_004296136.1| flagellar basal-body rod protein FlgB [Nitrosomonas sp. AL212]
 gi|325533254|gb|ADZ27974.1| flagellar basal-body rod protein FlgB [Nitrosomonas sp. AL212]
          Length = 139

 Score = 37.9 bits (86), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 17/37 (45%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA 47
          A      R   +A N++N DT  F+   + FS V+  
Sbjct: 17 ALNLRAARQELLASNVANADTPNFKARDIDFSSVLRE 53


>gi|254255092|ref|ZP_04948409.1| Flagellar hook-associated protein [Burkholderia dolosa AUO158]
 gi|124899737|gb|EAY71580.1| Flagellar hook-associated protein [Burkholderia dolosa AUO158]
          Length = 446

 Score = 37.9 bits (86), Expect = 1.2,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 28/80 (35%), Gaps = 1/80 (1%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
              +IGL+  LA +  L+  A N +N  T G+    V  +  VG    D    + F   
Sbjct: 1  MNIMHIGLSGTLAAQAGLNVAARNTANLLTPGYTRQGVHLTSRVGG-GVDATSLVRFADQ 59

Query: 62 GKEYLSKEVGSFISTGTELD 81
           K        +     +  +
Sbjct: 60 YKTQQKWASNAPYGRYSVTE 79


>gi|325524331|gb|EGD02432.1| flagellar hook-associated protein FlgK [Burkholderia sp. TJI49]
          Length = 48

 Score = 37.9 bits (86), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 22/48 (45%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
           N+G++   A    L+T   N+SN  T G+   +  ++E  G   +  
Sbjct: 1  MNLGVSGLNAALWGLTTTGQNISNAATPGYSVERPVYAEASGQYTSSG 48


>gi|228933022|ref|ZP_04095885.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|228826623|gb|EEM72394.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
          Length = 420

 Score = 37.9 bits (86), Expect = 1.2,   Method: Composition-based stats.
 Identities = 5/34 (14%), Positives = 11/34 (32%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
            N   EM  ++   + F + +  I    +     
Sbjct: 382 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 415


>gi|167568430|ref|ZP_02361304.1| flagellar hook-associated protein FlgK [Burkholderia oklahomensis
           C6786]
          Length = 668

 Score = 37.9 bits (86), Expect = 1.2,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 12/37 (32%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N   E   ++   Q + +   +I   +      +
Sbjct: 628 SGVNQNEEAANLMQYQQLYQANAKVIQTADSLFKTVL 664



 Score = 36.8 bits (83), Expect = 2.9,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 28/80 (35%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           T  N+G++   A    ++T   N+SN+ T G+   +  ++E  G   +           
Sbjct: 3  NTLMNLGISGLNAALWGITTTGQNISNSATPGYSVERPVYAEASGQYTSSGYLPQGVTTV 62

Query: 62 GKEYLSKEVGSFISTGTELD 81
            E    +  S      +  
Sbjct: 63 TVERQYNQYLSNQLNAAQTQ 82


>gi|167561212|ref|ZP_02354128.1| flagellar hook-associated protein FlgK [Burkholderia oklahomensis
           EO147]
          Length = 668

 Score = 37.9 bits (86), Expect = 1.2,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 12/37 (32%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N   E   ++   Q + +   +I   +      +
Sbjct: 628 SGVNQNEEAANLMQYQQLYQANAKVIQTADSLFKTVL 664



 Score = 36.8 bits (83), Expect = 2.9,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 28/80 (35%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           T  N+G++   A    ++T   N+SN+ T G+   +  ++E  G   +           
Sbjct: 3  NTLMNLGISGLNAALWGITTTGQNISNSATPGYSVERPVYAEASGQYTSSGYLPQGVTTV 62

Query: 62 GKEYLSKEVGSFISTGTELD 81
            E    +  S      +  
Sbjct: 63 TVERQYNQYLSNQLNAAQTQ 82


>gi|47091667|ref|ZP_00229463.1| flagellar hook-associated protein 1-related protein [Listeria
           monocytogenes str. 4b H7858]
 gi|47019986|gb|EAL10723.1| flagellar hook-associated protein 1-related protein [Listeria
           monocytogenes str. 4b H7858]
          Length = 494

 Score = 37.9 bits (86), Expect = 1.2,   Method: Composition-based stats.
 Identities = 5/35 (14%), Positives = 12/35 (34%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            N   EM  ++     + + T  ++     M   +
Sbjct: 457 VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALL 491


>gi|269961605|ref|ZP_06175967.1| flagellar hook-associated protein 1 [Vibrio harveyi 1DA3]
 gi|269833646|gb|EEZ87743.1| flagellar hook-associated protein 1 [Vibrio harveyi 1DA3]
          Length = 637

 Score = 37.9 bits (86), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 20/35 (57%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39
           N+G  + L  +++L+T   N+SN +T G+    V
Sbjct: 6  LNVGTQSVLTAQRQLNTTGHNISNANTEGYSRQSV 40



 Score = 37.5 bits (85), Expect = 1.4,   Method: Composition-based stats.
 Identities = 5/38 (13%), Positives = 14/38 (36%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           S  N   E   M+   Q + + + ++     +    ++
Sbjct: 598 SGVNLDEEAANMMKFQQAYMASSRVMQAANDTFNTILQ 635


>gi|312882653|ref|ZP_07742390.1| flagellar hook-associated protein FlgK [Vibrio caribbenthicus
          ATCC BAA-2122]
 gi|309369614|gb|EFP97129.1| flagellar hook-associated protein FlgK [Vibrio caribbenthicus
          ATCC BAA-2122]
          Length = 624

 Score = 37.9 bits (86), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 22/68 (32%), Gaps = 1/68 (1%)

Query: 13 LALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGS 72
          L  +++L+T   N+SN +T G+    V          +        V   K   S +  +
Sbjct: 14 LTAQKQLNTTGHNISNVNTDGYSRQSVI-QATETPRYHSGQTYGMGVHVEKVRRSWDQFA 72

Query: 73 FISTGTEL 80
                  
Sbjct: 73 VSELNVST 80



 Score = 35.2 bits (79), Expect = 8.1,   Method: Composition-based stats.
 Identities = 5/32 (15%), Positives = 13/32 (40%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           S  N   E   M+   Q + + + ++  +  +
Sbjct: 585 SGVNLDEEAANMMKFQQAYMASSRIMQASNDT 616


>gi|261253617|ref|ZP_05946190.1| flagellar basal-body rod protein FlgB [Vibrio orientalis CIP
          102891]
 gi|260937008|gb|EEX92997.1| flagellar basal-body rod protein FlgB [Vibrio orientalis CIP
          102891]
          Length = 131

 Score = 37.9 bits (86), Expect = 1.2,   Method: Composition-based stats.
 Identities = 6/38 (15%), Positives = 19/38 (50%)

Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
          E+    ++ N++  +T G++   + F + + A  ++  
Sbjct: 20 ERNAEVMSTNIAQANTPGYKAKGMDFQKALQAATSEAS 57


>gi|254508414|ref|ZP_05120534.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
          16]
 gi|219548624|gb|EED25629.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus
          16]
          Length = 624

 Score = 37.9 bits (86), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 23/68 (33%), Gaps = 1/68 (1%)

Query: 13 LALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGS 72
          L  +++L+T   N+SN +T G+    V     +       +     V   K   S +  +
Sbjct: 14 LTAQRQLNTTGHNISNANTEGYSRQSVVQGTNIPRQYGG-ETYGMGVHVEKVRRSWDQFA 72

Query: 73 FISTGTEL 80
                  
Sbjct: 73 VNELNMST 80



 Score = 36.8 bits (83), Expect = 2.7,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 13/37 (35%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N   E   M+   Q + + + ++     +    +
Sbjct: 585 SGVNLDEEAANMMKFQQAYMASSRIMQAANDTFNTIL 621


>gi|86357860|ref|YP_469752.1| flagellar basal body rod protein [Rhizobium etli CFN 42]
 gi|86281962|gb|ABC91025.1| probable flagellar basal body rod protein [Rhizobium etli CFN 42]
          Length = 101

 Score = 37.9 bits (86), Expect = 1.2,   Method: Composition-based stats.
 Identities = 10/51 (19%), Positives = 20/51 (39%)

Query: 6  NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56
          NI L+   A   R+  +A+N++N+ T  +  +    + V            
Sbjct: 8  NIALSGVRAQTTRVGAIANNVANSSTPDYARLNTSLTTVASGGVQATGNPT 58


>gi|163802597|ref|ZP_02196489.1| flagellar hook-associated protein K [Vibrio sp. AND4]
 gi|159173680|gb|EDP58499.1| flagellar hook-associated protein K [Vibrio sp. AND4]
          Length = 637

 Score = 37.9 bits (86), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 20/35 (57%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39
           N+G  + L  +++L+T   N+SN +T G+    V
Sbjct: 6  LNVGTQSVLTAQRQLNTTGHNISNANTEGYSRQSV 40



 Score = 37.5 bits (85), Expect = 1.5,   Method: Composition-based stats.
 Identities = 5/38 (13%), Positives = 14/38 (36%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           S  N   E   M+   Q + + + ++     +    ++
Sbjct: 598 SGVNLDEEAANMMKFQQAYMASSRVMQAANDTFNTILQ 635


>gi|323498414|ref|ZP_08103410.1| flagellar hook-associated protein FlgK [Vibrio sinaloensis DSM
          21326]
 gi|323316487|gb|EGA69502.1| flagellar hook-associated protein FlgK [Vibrio sinaloensis DSM
          21326]
          Length = 624

 Score = 37.9 bits (86), Expect = 1.2,   Method: Composition-based stats.
 Identities = 10/71 (14%), Positives = 23/71 (32%)

Query: 13 LALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGS 72
          L  +++L+T   N+SN +T G+    V     +          +            +   
Sbjct: 14 LTAQRQLNTTGHNISNANTEGYSRQSVIQGTNMPRQFGGETYGMGVHVEKVRRSWDQFAV 73

Query: 73 FISTGTELDFA 83
               +  ++A
Sbjct: 74 NELNMSTTNYA 84



 Score = 36.4 bits (82), Expect = 3.7,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 13/37 (35%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N   E   M+   Q + + + ++     +    +
Sbjct: 585 SGVNLDEEAANMMKFQQAYMASSRIMQAANDTFNTIL 621


>gi|307823528|ref|ZP_07653757.1| flagellar basal-body rod protein FlgB [Methylobacter
          tundripaludum SV96]
 gi|307735513|gb|EFO06361.1| flagellar basal-body rod protein FlgB [Methylobacter
          tundripaludum SV96]
          Length = 130

 Score = 37.9 bits (86), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 28/73 (38%)

Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIS 75
          E+R   +A N++N DT  F+   V F  V+              A       + VG+ + 
Sbjct: 20 EKRGEILAANLANADTPNFKARDVDFKSVLKQSMTSGVAMERTHAGHIAPQQQVVGANVM 79

Query: 76 TGTELDFALEGDA 88
                 +L+G+ 
Sbjct: 80 YRNPYQVSLDGNT 92


>gi|163856432|ref|YP_001630730.1| flagellar basal body rod protein FlgB [Bordetella petrii DSM
          12804]
 gi|163260160|emb|CAP42462.1| flagellar basal-body rod protein FlgB [Bordetella petrii]
          Length = 135

 Score = 37.9 bits (86), Expect = 1.3,   Method: Composition-based stats.
 Identities = 6/33 (18%), Positives = 14/33 (42%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50
          R   ++ N++N DT  ++     F   +    +
Sbjct: 22 RQEVLSSNIANADTPNYKARDFDFQAAMRNALD 54


>gi|170703093|ref|ZP_02893913.1| flagellar basal-body rod protein FlgB [Burkholderia ambifaria
          IOP40-10]
 gi|171321835|ref|ZP_02910736.1| flagellar basal-body rod protein FlgB [Burkholderia ambifaria
          MEX-5]
 gi|170131990|gb|EDT00498.1| flagellar basal-body rod protein FlgB [Burkholderia ambifaria
          IOP40-10]
 gi|171092873|gb|EDT38125.1| flagellar basal-body rod protein FlgB [Burkholderia ambifaria
          MEX-5]
          Length = 162

 Score = 37.9 bits (86), Expect = 1.3,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 17/42 (40%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          A      R   ++ N++N DT G++   V F+  +       
Sbjct: 15 ALDVRAYRQELLSSNIANADTPGYQARDVDFASTLARSLKQT 56


>gi|172061975|ref|YP_001809627.1| flagellar basal body rod protein FlgB [Burkholderia ambifaria
          MC40-6]
 gi|171994492|gb|ACB65411.1| flagellar basal-body rod protein FlgB [Burkholderia ambifaria
          MC40-6]
          Length = 162

 Score = 37.9 bits (86), Expect = 1.3,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 17/42 (40%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          A      R   ++ N++N DT G++   V F+  +       
Sbjct: 15 ALDVRAYRQELLSSNIANADTPGYQARDVDFASTLARSLKQT 56


>gi|78067840|ref|YP_370609.1| flagellar basal body rod protein FlgB [Burkholderia sp. 383]
 gi|77968585|gb|ABB09965.1| Flagellar basal-body rod protein FlgB [Burkholderia sp. 383]
          Length = 162

 Score = 37.9 bits (86), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/73 (15%), Positives = 27/73 (36%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A      R   ++ N++N+DT G++   V F+  +          ++   + +  +++  
Sbjct: 15 ALDVRAYRQELLSSNIANSDTPGYQARDVDFASTLARSLKQTGGGLAPSNAAQLPMAQPA 74

Query: 71 GSFISTGTELDFA 83
          G           A
Sbjct: 75 GVTSGMSMVSTAA 87


>gi|115353121|ref|YP_774960.1| flagellar basal body rod protein FlgB [Burkholderia ambifaria
          AMMD]
 gi|115283109|gb|ABI88626.1| flagellar basal-body rod protein FlgB [Burkholderia ambifaria
          AMMD]
          Length = 162

 Score = 37.9 bits (86), Expect = 1.3,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 17/42 (40%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          A      R   ++ N++N DT G++   V F+  +       
Sbjct: 15 ALDVRAYRQELLSSNIANADTPGYQARDVDFASTLARSLKQA 56


>gi|262273522|ref|ZP_06051336.1| flagellar hook-associated protein FlgK [Grimontia hollisae CIP
           101886]
 gi|262222500|gb|EEY73811.1| flagellar hook-associated protein FlgK [Grimontia hollisae CIP
           101886]
          Length = 464

 Score = 37.9 bits (86), Expect = 1.3,   Method: Composition-based stats.
 Identities = 6/34 (17%), Positives = 14/34 (41%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235
           S  N   E   ++  TQ + +   +I   ++ + 
Sbjct: 424 SGVNLDEEAVSLMQFTQMYQANAKVISTAQQLLD 457



 Score = 37.5 bits (85), Expect = 1.5,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 6/82 (7%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
             FNIGL+   A    LS    N++ +   G+   ++ F         D   ++S V  
Sbjct: 1  MNLFNIGLSGLNAASAGLSVTGQNINQSLVPGYSRQRISFGS------QDGGVQVSSVER 54

Query: 62 GKEYLSKEVGSFISTGTELDFA 83
            +  +        +G     A
Sbjct: 55 MSDTFTHLQIQRQRSGFGYHQA 76


>gi|254246962|ref|ZP_04940283.1| Flagellar basal-body rod protein FlgB [Burkholderia cenocepacia
          PC184]
 gi|124871738|gb|EAY63454.1| Flagellar basal-body rod protein FlgB [Burkholderia cenocepacia
          PC184]
          Length = 172

 Score = 37.9 bits (86), Expect = 1.3,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 17/43 (39%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
          A      R   ++ N++N DT G++   V F+  +        
Sbjct: 25 ALDVRAYRQELLSSNIANADTPGYQARDVDFASTLARSLKQTS 67


>gi|56130699|ref|YP_145602.1| putative flagellar basal-body rod protein [Ralstonia
          metallidurans CH34]
 gi|94152373|ref|YP_581780.1| flagellar basal-body rod protein FlgB [Cupriavidus metallidurans
          CH34]
 gi|187928838|ref|YP_001899325.1| flagellar basal-body rod protein FlgB [Ralstonia pickettii 12J]
 gi|56068689|emb|CAI11251.1| putative flagellar basal-body rod protein [Cupriavidus
          metallidurans CH34]
 gi|93358743|gb|ABF12830.1| flagellar basal-body rod protein FlgB [Cupriavidus metallidurans
          CH34]
 gi|187725728|gb|ACD26893.1| flagellar basal-body rod protein FlgB [Ralstonia pickettii 12J]
          Length = 140

 Score = 37.9 bits (86), Expect = 1.3,   Method: Composition-based stats.
 Identities = 8/66 (12%), Positives = 22/66 (33%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     +R   ++ N++N DT  ++   + FS  +  +            +   ++    
Sbjct: 20 ALRLRTRRFELLSANIANADTPNYKARDIDFSAELDRVMGSGQNFAGMTMTSPRHIEASK 79

Query: 71 GSFIST 76
           +    
Sbjct: 80 PALEED 85


>gi|156973594|ref|YP_001444501.1| flagellar hook-associated protein FlgK [Vibrio harveyi ATCC
          BAA-1116]
 gi|156525188|gb|ABU70274.1| hypothetical protein VIBHAR_01297 [Vibrio harveyi ATCC BAA-1116]
          Length = 637

 Score = 37.9 bits (86), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 20/35 (57%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39
           N+G  + L  +++L+T   N+SN +T G+    V
Sbjct: 6  LNVGTQSVLTAQRQLNTTGHNISNANTEGYSRQSV 40



 Score = 37.5 bits (85), Expect = 1.5,   Method: Composition-based stats.
 Identities = 5/38 (13%), Positives = 14/38 (36%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           S  N   E   M+   Q + + + ++     +    ++
Sbjct: 598 SGVNLDEEAANMMKFQQAYMASSRVMQAANDTFNTILQ 635


>gi|153834473|ref|ZP_01987140.1| flagellar hook-associated protein FlgK [Vibrio harveyi HY01]
 gi|148869169|gb|EDL68201.1| flagellar hook-associated protein FlgK [Vibrio harveyi HY01]
          Length = 637

 Score = 37.9 bits (86), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 20/35 (57%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39
           N+G  + L  +++L+T   N+SN +T G+    V
Sbjct: 6  LNVGTQSVLTAQRQLNTTGHNISNANTEGYSRQSV 40



 Score = 37.5 bits (85), Expect = 1.5,   Method: Composition-based stats.
 Identities = 5/38 (13%), Positives = 14/38 (36%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           S  N   E   M+   Q + + + ++     +    ++
Sbjct: 598 SGVNLDEEAANMMKFQQAYMASSRVMQAANDTFNTILQ 635


>gi|325529010|gb|EGD06023.1| flagellar basal body rod protein FlgB [Burkholderia sp. TJI49]
          Length = 162

 Score = 37.9 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 11/73 (15%), Positives = 27/73 (36%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A      R   ++ N++N DT G++   V F+  +       +  ++   + +  +++  
Sbjct: 15 ALDVRAYRQELLSSNIANADTPGYQARDVDFASALARSLKQANGGLAPSNAAQLPMTQPA 74

Query: 71 GSFISTGTELDFA 83
          G           A
Sbjct: 75 GVTSGMTMASTAA 87


>gi|313610115|gb|EFR85438.1| conserved hypothetical protein [Listeria monocytogenes FSL F2-208]
          Length = 37

 Score = 37.9 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 6/36 (16%), Positives = 12/36 (33%)

Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
              E   ++     F   T +I   +  M + +  I
Sbjct: 1   MSREFVNLMTYQSGFQGNTKVIRVADDVMKQIVNLI 36


>gi|91224202|ref|ZP_01259465.1| flagellar basal body rod protein [Vibrio alginolyticus 12G01]
 gi|269965641|ref|ZP_06179754.1| Flagellar basal-body rod protein flgB [Vibrio alginolyticus 40B]
 gi|91191113|gb|EAS77379.1| flagellar basal body rod protein [Vibrio alginolyticus 12G01]
 gi|269829709|gb|EEZ83945.1| Flagellar basal-body rod protein flgB [Vibrio alginolyticus 40B]
          Length = 120

 Score = 37.9 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 30/85 (35%), Gaps = 1/85 (1%)

Query: 17  QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76
           QR   +A N++N DT G+    + F+ V+  +      K       +   S    +    
Sbjct: 21  QRTKVLASNLANVDTPGYLAKDLSFTTVMNQVTAGGVNKPVPKFQVQAQYSVPYQNSK-N 79

Query: 77  GTELDFALEGDAWFALESPRGIILT 101
           G  ++  +E   +          LT
Sbjct: 80  GNTVELGVEQAKFTQNNMDFQTSLT 104


>gi|206558965|ref|YP_002229725.1| flagellar basal body rod protein FlgB [Burkholderia cenocepacia
          J2315]
 gi|198035002|emb|CAR50874.1| flagellar basal-body rod protein FlgB (putative proximal rod
          protein) [Burkholderia cenocepacia J2315]
          Length = 162

 Score = 37.9 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 10/70 (14%), Positives = 25/70 (35%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A      R   ++ N++N DT G++   V F+  +          ++   + +  +++  
Sbjct: 15 ALDVRAYRQELLSSNIANADTPGYQARDVDFASTLARSLKQTSGGLAPSNAAQLPMTQPA 74

Query: 71 GSFISTGTEL 80
          G         
Sbjct: 75 GVTSGMSMVS 84


>gi|86146158|ref|ZP_01064484.1| flagellar basal body protein [Vibrio sp. MED222]
 gi|218708801|ref|YP_002416422.1| flagellar basal body rod protein FlgB [Vibrio splendidus LGP32]
 gi|85836105|gb|EAQ54237.1| flagellar basal body protein [Vibrio sp. MED222]
 gi|218321820|emb|CAV17788.1| Flagellar basal body protein FlgB [Vibrio splendidus LGP32]
          Length = 131

 Score = 37.9 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 6/38 (15%), Positives = 19/38 (50%)

Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
          E+    ++ N++  +T G++   + F++ + A  +   
Sbjct: 20 ERNAEVLSTNIAQANTPGYKAKGLDFNKSLQAASSGAS 57


>gi|107023956|ref|YP_622283.1| flagellar basal body rod protein FlgB [Burkholderia cenocepacia
          AU 1054]
 gi|116691043|ref|YP_836666.1| flagellar basal body rod protein FlgB [Burkholderia cenocepacia
          HI2424]
 gi|105894145|gb|ABF77310.1| flagellar basal-body rod protein FlgB [Burkholderia cenocepacia
          AU 1054]
 gi|116649132|gb|ABK09773.1| flagellar basal-body rod protein FlgB [Burkholderia cenocepacia
          HI2424]
          Length = 162

 Score = 37.9 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 17/43 (39%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
          A      R   ++ N++N DT G++   V F+  +        
Sbjct: 15 ALDVRAYRQELLSSNIANADTPGYQARDVDFASTLARSLKQTS 57


>gi|153831645|ref|ZP_01984312.1| flagellar basal-body rod protein FlgB [Vibrio harveyi HY01]
 gi|156976138|ref|YP_001447044.1| flagellar basal body rod protein FlgB [Vibrio harveyi ATCC
           BAA-1116]
 gi|269960113|ref|ZP_06174489.1| Flagellar basal-body rod protein flgB [Vibrio harveyi 1DA3]
 gi|148872155|gb|EDL70972.1| flagellar basal-body rod protein FlgB [Vibrio harveyi HY01]
 gi|156527732|gb|ABU72817.1| hypothetical protein VIBHAR_04909 [Vibrio harveyi ATCC BAA-1116]
 gi|269835084|gb|EEZ89167.1| Flagellar basal-body rod protein flgB [Vibrio harveyi 1DA3]
          Length = 120

 Score = 37.5 bits (85), Expect = 1.4,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 30/85 (35%), Gaps = 1/85 (1%)

Query: 17  QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76
           QR   +A N++N DT G+    + F+ V+  +      K       +   S    +    
Sbjct: 21  QRTKVLASNLANVDTPGYLAKDLSFTTVMNQMSAGSVNKPVPKFQVEAQYSVPYQNSK-D 79

Query: 77  GTELDFALEGDAWFALESPRGIILT 101
           G  ++  +E   +          LT
Sbjct: 80  GNTVELGVEQAKFTQNNMDFQTSLT 104


>gi|95929846|ref|ZP_01312587.1| flagellar basal-body rod protein FlgB [Desulfuromonas acetoxidans
          DSM 684]
 gi|95134142|gb|EAT15800.1| flagellar basal-body rod protein FlgB [Desulfuromonas acetoxidans
          DSM 684]
          Length = 136

 Score = 37.5 bits (85), Expect = 1.4,   Method: Composition-based stats.
 Identities = 6/57 (10%), Positives = 17/57 (29%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLS 67
          +     +    +A N++N  T G++     F + +          ++          
Sbjct: 17 SMDLRLRNQQIIAANVANAQTPGYQAKTFTFEDALRQAATGKGTDMAVTHPQHISTH 73


>gi|332092901|gb|EGI97969.1| flagellar basal-body rod protein flgC [Shigella dysenteriae
          155-74]
          Length = 49

 Score = 37.5 bits (85), Expect = 1.5,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 6/46 (13%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKF 41
             F+I  +A  A  QRL+  A N++N     G     +R  +V F
Sbjct: 4  LNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRAKQVVF 49


>gi|332702981|ref|ZP_08423069.1| flagellar basal-body rod protein FlgB [Desulfovibrio africanus str.
           Walvis Bay]
 gi|332553130|gb|EGJ50174.1| flagellar basal-body rod protein FlgB [Desulfovibrio africanus str.
           Walvis Bay]
          Length = 167

 Score = 37.5 bits (85), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 28/68 (41%), Gaps = 3/68 (4%)

Query: 12  QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
                Q L  +A N+SN +T  ++  ++ F E +     DID +     + + ++     
Sbjct: 49  LRLQRQNL-VIA-NISNINTPNYKPRRLDFEEKL-QKALDIDSRGKMARTDENHVPTAFN 105

Query: 72  SFISTGTE 79
           +   +G  
Sbjct: 106 AKGFSGDW 113


>gi|326386927|ref|ZP_08208541.1| flagellar proximal rod protein [Novosphingobium nitrogenifigens
          DSM 19370]
 gi|326208607|gb|EGD59410.1| flagellar proximal rod protein [Novosphingobium nitrogenifigens
          DSM 19370]
          Length = 118

 Score = 37.5 bits (85), Expect = 1.5,   Method: Composition-based stats.
 Identities = 11/66 (16%), Positives = 25/66 (37%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QRL  +  N++N  T G++   + F+  + ++        +  +S    +    
Sbjct: 15 ALELRAQRLGLLTSNIANAATPGYKARDIDFASALKSMTQGASNSQAISSSTLYRVPVMP 74

Query: 71 GSFIST 76
              +T
Sbjct: 75 SLDGNT 80


>gi|85712260|ref|ZP_01043311.1| Flagellar hook-associated protein [Idiomarina baltica OS145]
 gi|85693887|gb|EAQ31834.1| Flagellar hook-associated protein [Idiomarina baltica OS145]
          Length = 685

 Score = 37.5 bits (85), Expect = 1.5,   Method: Composition-based stats.
 Identities = 26/213 (12%), Positives = 53/213 (24%), Gaps = 12/213 (5%)

Query: 40  KFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
            F +  G    D       V +     + +V      G   D  L G +     + +   
Sbjct: 475 NFFDAAGKTLADGAPTGVAVDAVNSDGTFDVTLSRKNG--SDITLTGLSDLKNLAQQAND 532

Query: 100 LTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG 159
                       GS +           A     I    + F+    GE   + +  A + 
Sbjct: 533 QAAANGNPAPFAGSPLDYDISINGQPAAGDSYSIEYNTDGFDDNRNGEAFTELQQNAQLR 592

Query: 160 LYSVDMSQGFV----------RRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYE 209
             S D     +              S +                 +  +   S  N   E
Sbjct: 593 RSSADSDDANMTFAEGYSRVVSDIGSYVQQTRTRRDAAQAIEAQTQAMYEAKSGVNLEEE 652

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
              +I   + +N+   +I   +++    +  + 
Sbjct: 653 AANLIQFERAYNAAARIITVAQRTFDSLLNAVG 685


>gi|146293693|ref|YP_001184117.1| flagellar basal body rod protein FlgB [Shewanella putrefaciens
          CN-32]
 gi|145565383|gb|ABP76318.1| flagellar basal-body rod protein FlgB [Shewanella putrefaciens
          CN-32]
 gi|319427092|gb|ADV55166.1| flagellar basal-body rod protein FlgB [Shewanella putrefaciens
          200]
          Length = 134

 Score = 37.5 bits (85), Expect = 1.5,   Method: Composition-based stats.
 Identities = 8/25 (32%), Positives = 14/25 (56%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVKFS 42
          R   ++ N++N DT  ++   V FS
Sbjct: 22 RAEVISSNIANADTPHYKARDVDFS 46


>gi|157738172|ref|YP_001490856.1| flagellar basal body rod protein FlgB [Arcobacter butzleri
          RM4018]
 gi|315636315|ref|ZP_07891565.1| flagellar basal body rod protein FlgB [Arcobacter butzleri JV22]
 gi|157700026|gb|ABV68186.1| flagellar basal body rod protein FlgB [Arcobacter butzleri
          RM4018]
 gi|315479404|gb|EFU70087.1| flagellar basal body rod protein FlgB [Arcobacter butzleri JV22]
          Length = 132

 Score = 37.5 bits (85), Expect = 1.5,   Method: Composition-based stats.
 Identities = 7/33 (21%), Positives = 17/33 (51%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50
          +   ++ N++N +T  ++T  + F E +    N
Sbjct: 20 KQKVISSNIANVNTPNYKTKDLVFQEELDKNSN 52


>gi|254464199|ref|ZP_05077610.1| flagellar basal-body rod protein; FlgB [Rhodobacterales bacterium
          Y4I]
 gi|206685107|gb|EDZ45589.1| flagellar basal-body rod protein; FlgB [Rhodobacterales bacterium
          Y4I]
          Length = 129

 Score = 37.5 bits (85), Expect = 1.5,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 1/53 (1%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIKNDID 53
             F I  +      +R + VA N++N DT G+    +K F+EV  A      
Sbjct: 5  LNVFKIAYSMATHAGKRQALVAQNIANADTPGYHAKDIKPFTEVFAAGARQSS 57


>gi|260767763|ref|ZP_05876698.1| flagellar hook-associated protein FlgK [Vibrio furnissii CIP
           102972]
 gi|260617272|gb|EEX42456.1| flagellar hook-associated protein FlgK [Vibrio furnissii CIP
           102972]
          Length = 599

 Score = 37.5 bits (85), Expect = 1.5,   Method: Composition-based stats.
 Identities = 6/37 (16%), Positives = 13/37 (35%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N   E   M+   Q + + + +I     +    +
Sbjct: 560 SGVNLDEEAANMMKFQQAYMASSRIIQAANDTFNTIL 596


>gi|227815506|ref|YP_002815515.1| putative flagellar hook-associated protein [Bacillus anthracis
          str. CDC 684]
 gi|254755229|ref|ZP_05207263.1| flagellar hook-associated protein FlgK [Bacillus anthracis str.
          Vollum]
 gi|227007620|gb|ACP17363.1| putative flagellar hook-associated protein [Bacillus anthracis
          str. CDC 684]
          Length = 214

 Score = 37.5 bits (85), Expect = 1.5,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 23/53 (43%)

Query: 6  NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
          N  L+  LA +  L T   N+SN  T G+    V +     +     +QKI +
Sbjct: 7  NTPLSGLLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSAGASQGYSPEQKIGY 59


>gi|153839997|ref|ZP_01992664.1| flagellar hook-associated protein [Vibrio parahaemolyticus AQ3810]
 gi|149746457|gb|EDM57466.1| flagellar hook-associated protein [Vibrio parahaemolyticus AQ3810]
          Length = 375

 Score = 37.5 bits (85), Expect = 1.6,   Method: Composition-based stats.
 Identities = 4/36 (11%), Positives = 13/36 (36%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            N   E   M+   Q + + + ++     +    ++
Sbjct: 338 VNLDEEAANMMKFQQAYMASSRVMQAANDTFNTILQ 373


>gi|127512276|ref|YP_001093473.1| flagellar basal body rod protein FlgB [Shewanella loihica PV-4]
 gi|126637571|gb|ABO23214.1| flagellar basal-body rod protein FlgB [Shewanella loihica PV-4]
          Length = 132

 Score = 37.5 bits (85), Expect = 1.6,   Method: Composition-based stats.
 Identities = 8/59 (13%), Positives = 22/59 (37%)

Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFI 74
            R   ++ N++N DT  ++   + F + + A +          ++ K +    +    
Sbjct: 20 SARAEVISSNIANADTPHYKAKDLDFDKALQAARTAQSGLAMSRSNEKHFDLAALSQQH 78


>gi|229172385|ref|ZP_04299944.1| Flagellar hook-associated protein FlgK [Bacillus cereus MM3]
 gi|228610856|gb|EEK68119.1| Flagellar hook-associated protein FlgK [Bacillus cereus MM3]
          Length = 432

 Score = 37.5 bits (85), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 23/53 (43%)

Query: 6  NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
          N  L+  LA +  L T   N+SN  T G+    V +     +     +QKI +
Sbjct: 7  NTPLSGLLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSAGASQGYSPEQKIGY 59



 Score = 37.5 bits (85), Expect = 1.6,   Method: Composition-based stats.
 Identities = 4/34 (11%), Positives = 11/34 (32%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
            N   EM  ++   + F + +  +    +     
Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAMTTMNEVFDSL 427


>gi|114765248|ref|ZP_01444380.1| flagellar hook-associated protein K [Pelagibaca bermudensis
           HTCC2601]
 gi|114542383|gb|EAU45411.1| flagellar hook-associated protein K [Roseovarius sp. HTCC2601]
          Length = 470

 Score = 37.5 bits (85), Expect = 1.6,   Method: Composition-based stats.
 Identities = 18/138 (13%), Positives = 38/138 (27%), Gaps = 8/138 (5%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
            T+ N   +      +   TV+ N++N +   +   + +    V        Q      +
Sbjct: 4   ITALNAARSGMSTSSRWAETVSTNIANANNASYARRETQ----VTTNVQGAAQVSEITRA 59

Query: 62  GKEYLSKEVGSFISTGTELDFALEG----DAWFALESPRGIILTRDGRFKVTDDGSLVSA 117
               L       +    + D    G     +          +LTR   F+ +     VS 
Sbjct: 60  VDGALDAMYRGEVGRTAKQDAIAAGLESYTSLLGDTESTDTVLTRLTDFQSSLGLLAVSP 119

Query: 118 SGKYPVLDMASVPIQIPQ 135
           +             ++ Q
Sbjct: 120 ADTALQRATVGDAQELTQ 137


>gi|238028842|ref|YP_002913073.1| flagellar hook-associated protein FlgK [Burkholderia glumae BGR1]
 gi|237878036|gb|ACR30369.1| Flagellar hook-associated protein [Burkholderia glumae BGR1]
          Length = 664

 Score = 37.5 bits (85), Expect = 1.6,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 11/37 (29%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N   E   ++   Q + +   +I          +
Sbjct: 624 SGVNQDEEAVNLMQYQQMYQANAKVIQTASTLFSTLL 660


>gi|195940723|ref|ZP_03086105.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4024]
          Length = 30

 Score = 37.5 bits (85), Expect = 1.6,   Method: Composition-based stats.
 Identities = 4/27 (14%), Positives = 10/27 (37%)

Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIR 239
           MI   + + S    I   ++ +   + 
Sbjct: 1   MIVAQRNYQSNAQTIKTQDQILNTLVN 27


>gi|291520178|emb|CBK75399.1| Flagellar hook-associated protein [Butyrivibrio fibrisolvens 16/4]
          Length = 396

 Score = 37.5 bits (85), Expect = 1.6,   Method: Composition-based stats.
 Identities = 6/39 (15%), Positives = 17/39 (43%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            +S  E+  MI     +N+ +  I+   + +   + ++ 
Sbjct: 356 VSSDEELTTMIKYQSAYNAASRYINVVNEMIEHLVTSLG 394


>gi|15616943|ref|NP_240156.1| flagellar basal-body rod protein FlgB [Buchnera aphidicola str.
          APS (Acyrthosiphon pisum)]
 gi|25403596|pir||B84969 flagellar basal-body rod protein flgB [imported] - Buchnera sp.
          (strain APS)
 gi|10039008|dbj|BAB13042.1| flagellar basal-body rod protein flgB [Buchnera aphidicola str.
          APS (Acyrthosiphon pisum)]
          Length = 115

 Score = 37.5 bits (85), Expect = 1.6,   Method: Composition-based stats.
 Identities = 8/25 (32%), Positives = 15/25 (60%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVKFS 42
          R   ++ N++N DT G+++I   F 
Sbjct: 4  RQEILSANIANADTPGYKSIDFNFK 28


>gi|149908762|ref|ZP_01897423.1| LfgB [Moritella sp. PE36]
 gi|149808304|gb|EDM68243.1| LfgB [Moritella sp. PE36]
          Length = 123

 Score = 37.5 bits (85), Expect = 1.7,   Method: Composition-based stats.
 Identities = 17/109 (15%), Positives = 33/109 (30%), Gaps = 1/109 (0%)

Query: 11  AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
           A  A  QR   +A N++N DT G+      F  V+  ++  ++Q        +  +    
Sbjct: 15  ALQARVQRSEILAGNLANVDTPGYLARDYDFKSVLTNLEMQLNQSTGG-RLPELEMDSLY 73

Query: 71  GSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119
                   + + A  G       +      +      +   G      G
Sbjct: 74  RVPFQASKDGNTAELGVEQAKFNNNAMNFQSSLTFLNMRIQGLQKVIDG 122


>gi|56460246|ref|YP_155527.1| flagellar hook-associated protein [Idiomarina loihiensis L2TR]
 gi|56179256|gb|AAV81978.1| Flagellar hook-associated protein [Idiomarina loihiensis L2TR]
          Length = 671

 Score = 37.5 bits (85), Expect = 1.7,   Method: Composition-based stats.
 Identities = 5/39 (12%), Positives = 14/39 (35%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            N   E   +I   Q + +   +I  ++      + ++ 
Sbjct: 633 VNLEEEAANLIQYQQAYTASARIITTSQAIFETLLTSLR 671



 Score = 36.4 bits (82), Expect = 3.9,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 1/47 (2%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIKN 50
           NIG    LA +Q L T   N++NT+T  +   + + F    G ++ 
Sbjct: 6  LNIGKNGILAHQQSLQTTGKNINNTNTDSYVRERTEYFESSYGGLER 52


>gi|186686674|ref|YP_001869868.1| hypothetical protein Npun_CR013 [Nostoc punctiforme PCC 73102]
 gi|186469559|gb|ACC85357.1| conserved hypothetical protein [Nostoc punctiforme PCC 73102]
          Length = 457

 Score = 37.5 bits (85), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 2/41 (4%)

Query: 201 DSNANSMYEM-GQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
            SN     ++   +I L Q F++    I++ +K + EAI N
Sbjct: 163 QSNVEVTKQLSTDLISLKQAFDAQQKTIEQLQKGL-EAINN 202


>gi|163733138|ref|ZP_02140582.1| flagellar basal-body rod protein FlgB, putative [Roseobacter
          litoralis Och 149]
 gi|161393673|gb|EDQ17998.1| flagellar basal-body rod protein FlgB, putative [Roseobacter
          litoralis Och 149]
          Length = 141

 Score = 37.5 bits (85), Expect = 1.7,   Method: Composition-based stats.
 Identities = 9/51 (17%), Positives = 19/51 (37%), Gaps = 1/51 (1%)

Query: 17 QRLSTVADNMSNTDTVGFR-TIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66
          Q+ +  A N++N+DT  F+    + FS+      ++               
Sbjct: 29 QKQAVTAQNVANSDTPDFKAKDLIAFSDAYRLDPSNGGWGSQKATRQTHIH 79


>gi|163744318|ref|ZP_02151678.1| Flagellar basal body protein [Oceanibulbus indolifex HEL-45]
 gi|161381136|gb|EDQ05545.1| Flagellar basal body protein [Oceanibulbus indolifex HEL-45]
          Length = 119

 Score = 37.5 bits (85), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/76 (15%), Positives = 29/76 (38%), Gaps = 4/76 (5%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKV-KFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
             L  R   V++N++N  T  F+   V  F+ ++     ++ +    V +  ++ +   
Sbjct: 1  MQWLSARQKVVSENVANVATPNFKARDVSSFASMLS---GELSRDNGLVTTHDKHFTGVA 57

Query: 71 GSFISTGTELDFALEG 86
                    D ++ G
Sbjct: 58 QGTPGVREVTDRSVIG 73


>gi|82544461|ref|YP_408408.1| cell-proximal portion of basal-body rod [Shigella boydii Sb227]
 gi|81245872|gb|ABB66580.1| cell-proximal portion of basal-body rod [Shigella boydii Sb227]
 gi|320186980|gb|EFW61693.1| Flagellar basal-body rod protein FlgB [Shigella flexneri CDC
          796-83]
 gi|332094098|gb|EGI99150.1| flagellar basal-body rod protein FlgB [Shigella boydii 3594-74]
          Length = 109

 Score = 37.5 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 23/62 (37%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A     QR   +A N++N DT+G++   + F+  +  +        S VA          
Sbjct: 15 ALNLRAQRQEVLAANIANADTLGYQARDIDFASELKKVMQRGRDATSVVALTMTSTQHIP 74

Query: 71 GS 72
            
Sbjct: 75 AQ 76


>gi|77359719|ref|YP_339294.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
          [Pseudoalteromonas haloplanktis TAC125]
 gi|76874630|emb|CAI85851.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
          [Pseudoalteromonas haloplanktis TAC125]
          Length = 111

 Score = 37.5 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 22/45 (48%)

Query: 21 TVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65
           +A N++N DT G++   + F+  +   K+      S V +  ++
Sbjct: 1  MLATNIANADTPGYKAKDIDFASALKTAKSHQQGGNSMVRTNSKH 45


>gi|99082780|ref|YP_614934.1| flagellar hook-associated protein FlgK [Ruegeria sp. TM1040]
 gi|99039060|gb|ABF65672.1| Flagellar hook-associated protein 1 (HAP1) [Ruegeria sp. TM1040]
          Length = 482

 Score = 37.5 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 7/102 (6%), Positives = 31/102 (30%), Gaps = 1/102 (0%)

Query: 138 EIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRG 197
             +    +   +     + +    +  ++   +       +               ++  
Sbjct: 381 NNYAEAMEATNTITSPGLGSGDYSAYAIAANLMTNFTQENTWAEQELAYSSAIFSDIQSR 440

Query: 198 FLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            LE    ++  E+  ++ +   + +   +I   ++ M E +R
Sbjct: 441 ELEQG-VDTDSELQTLMMVETIYAANARMIQAIDEMMQELMR 481



 Score = 35.2 bits (79), Expect = 9.0,   Method: Composition-based stats.
 Identities = 6/31 (19%), Positives = 16/31 (51%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGF 34
          + +  +    A  +  S ++DN++N  + G+
Sbjct: 6  ALSSAMTGITAASRSTSVISDNLANALSEGY 36


>gi|114762159|ref|ZP_01441627.1| hypothetical protein 1100011001331_R2601_14510 [Pelagibaca
          bermudensis HTCC2601]
 gi|114545183|gb|EAU48186.1| hypothetical protein R2601_14510 [Roseovarius sp. HTCC2601]
          Length = 125

 Score = 37.5 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 10/51 (19%), Positives = 17/51 (33%), Gaps = 1/51 (1%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRT-IKVKFSEVVGAIKND 51
             F   +A       R +  A N++N DT G+       F   +   +  
Sbjct: 5  LNVFQTAMALAKHSGLRQALSAQNIANADTPGYHALDIPDFEATLRGSEGS 55


>gi|262404534|ref|ZP_06081089.1| flagellar hook-associated protein FlgK [Vibrio sp. RC586]
 gi|262349566|gb|EEY98704.1| flagellar hook-associated protein FlgK [Vibrio sp. RC586]
          Length = 579

 Score = 37.5 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 6/37 (16%), Positives = 14/37 (37%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N   E   M+   Q + + + +I  +  +    +
Sbjct: 540 SGVNLDEEAANMMKFQQAYMASSRIIQASNDTFNTIL 576


>gi|209695765|ref|YP_002263695.1| flagellar basal body rod protein FlgB [Aliivibrio salmonicida
          LFI1238]
 gi|208009718|emb|CAQ80022.1| flagellar basal-body rod protein FlgB [Aliivibrio salmonicida
          LFI1238]
          Length = 131

 Score = 37.5 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 7/35 (20%), Positives = 18/35 (51%)

Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50
           QR   +A N++  +T G++   + F + + +  +
Sbjct: 20 SQRAEMIATNIAQANTPGYKAKGMDFQKAMQSATS 54


>gi|167574707|ref|ZP_02367581.1| flagellar hook-associated protein FlgK [Burkholderia oklahomensis
           C6786]
          Length = 452

 Score = 37.5 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 16/100 (16%), Positives = 23/100 (23%), Gaps = 11/100 (11%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
                IG++   A    L   ADN SN  T G+    V            +    +    
Sbjct: 1   MNLIYIGMSGLRAANWSLRATADNTSNLATSGYSRRGVL-----------LSSGANGGVD 49

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101
               L              +  L           +   LT
Sbjct: 50  TSATLRFNESYKTQQLWTTNGKLGRHKASQSYLDQLERLT 89


>gi|13472573|ref|NP_104140.1| flagellar basal body rod protein FlgB [Mesorhizobium loti
          MAFF303099]
 gi|14023319|dbj|BAB49926.1| flagellar basal-body rod protein; FlgB [Mesorhizobium loti
          MAFF303099]
          Length = 126

 Score = 37.5 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 21/45 (46%), Gaps = 1/45 (2%)

Query: 15 LEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIKNDIDQKISF 58
          L  R S +A N++N +T G+    V+ F +V+      +    + 
Sbjct: 17 LSVRQSAIAGNIANANTPGYTANDVEPFEKVLDRTAVSLQTTEAG 61


>gi|299822286|ref|ZP_07054172.1| flagellar basal-body rod protein FlgB [Listeria grayi DSM 20601]
 gi|299815815|gb|EFI83053.1| flagellar basal-body rod protein FlgB [Listeria grayi DSM 20601]
          Length = 121

 Score = 37.2 bits (84), Expect = 1.9,   Method: Composition-based stats.
 Identities = 10/81 (12%), Positives = 28/81 (34%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M        +    L+   + ++DN++N  T G++  +  F + +    +  +     +A
Sbjct: 1  MDNYVASLGSYISYLQSSNTLISDNIANAQTAGYKAKESSFEQNLQQAGSLRETNPKHMA 60

Query: 61 SGKEYLSKEVGSFISTGTELD 81
                +    +  +     D
Sbjct: 61 GESAGSANVRITEKAGSVNED 81


>gi|302387798|ref|YP_003823620.1| flagellar basal-body rod protein FlgB [Clostridium
          saccharolyticum WM1]
 gi|302198426|gb|ADL05997.1| flagellar basal-body rod protein FlgB [Clostridium
          saccharolyticum WM1]
          Length = 126

 Score = 37.2 bits (84), Expect = 1.9,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 20/73 (27%), Gaps = 8/73 (10%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVV--------GAIKNDIDQKISFVASGKEYLSKE 69
          +     +N++N DT G++   V F +               DI   I+           E
Sbjct: 22 KQKITMNNIANGDTPGYKAQYVTFEDEFRKRLMSGRQGTSRDIGNIINSSRHFVRNTQDE 81

Query: 70 VGSFISTGTELDF 82
                     D 
Sbjct: 82 SARMDGNNVNTDV 94


>gi|255021351|ref|ZP_05293399.1| Flagellar basal-body rod protein flgB [Acidithiobacillus caldus
          ATCC 51756]
 gi|254969214|gb|EET26728.1| Flagellar basal-body rod protein flgB [Acidithiobacillus caldus
          ATCC 51756]
          Length = 137

 Score = 37.2 bits (84), Expect = 1.9,   Method: Composition-based stats.
 Identities = 9/58 (15%), Positives = 23/58 (39%)

Query: 9  LAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66
            A      R   +A N++N +T  +R + + F++ + A++   +  +          
Sbjct: 13 ADALKVSGYRQQLLAANIANANTPNYRAVDIPFAKTLAAVQRGAEGSLPMKTDSTRQF 70


>gi|167567756|ref|ZP_02360672.1| flagellar hook-associated protein FlgK [Burkholderia oklahomensis
          EO147]
          Length = 452

 Score = 37.2 bits (84), Expect = 1.9,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 16/42 (38%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
               IG++   A    L   ADN SN  T G+    V  S 
Sbjct: 1  MNLIYIGMSGLRAANWSLRATADNTSNLATSGYSRRGVLLSS 42


>gi|284007169|emb|CBA72453.1| flagellar hook-associated protein FlgK [Arsenophonus nasoniae]
          Length = 545

 Score = 37.2 bits (84), Expect = 1.9,   Method: Composition-based stats.
 Identities = 21/184 (11%), Positives = 49/184 (26%), Gaps = 10/184 (5%)

Query: 1   MQTSF-NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS-EVVGAIKNDIDQKISF 58
           M +S  N  ++     +  LST+  N++N+    +       + +      N +      
Sbjct: 1   MSSSLMNTAMSGLKVAQTALSTIGSNIANSKVESYHRQTTTLATDGSNNNINGVKVSGIQ 60

Query: 59  VASGKEYLSKEVGSFISTGTELDFA--------LEGDAWFALESPRGIILTRDGRFKVTD 110
               +   +    +    G    +A        L   +   L S      T         
Sbjct: 61  REYDEFINAHYNKAVTEQGERKIYAEFALELDKLMSASDTDLASSMTEFFTSLQTLSTDA 120

Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170
             + +          M S    + Q+         G I Q    ++ +      ++    
Sbjct: 121 ASAPLRTEVINKAQAMISRFKSVEQQFNTMEQRLNGNIGQMADKVSQLAQQVAKLNGEMT 180

Query: 171 RREN 174
           + + 
Sbjct: 181 KIKG 184


>gi|266621929|ref|ZP_06114864.1| flagellar hook-associated protein 1 [Clostridium hathewayi DSM
           13479]
 gi|288866402|gb|EFC98700.1| flagellar hook-associated protein 1 [Clostridium hathewayi DSM
           13479]
          Length = 87

 Score = 37.2 bits (84), Expect = 1.9,   Method: Composition-based stats.
 Identities = 5/41 (12%), Positives = 17/41 (41%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  +   E   M+   + ++++  L+   ++ +   I  + 
Sbjct: 43  SGVSLNEEGINMMTYNKAYSALGRLMTTMDEQLDMIINQMG 83


>gi|222833046|gb|EEE71523.1| predicted protein [Populus trichocarpa]
          Length = 264

 Score = 37.2 bits (84), Expect = 1.9,   Method: Composition-based stats.
 Identities = 4/41 (9%), Positives = 15/41 (36%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
           S  N   E  +++   Q + +   ++   +      ++ + 
Sbjct: 223 SGVNLDEEAAKLLQYQQSYQASAKMLQVAQSIFDSVLQTVG 263


>gi|83595981|gb|ABC25341.1| flagellar hook associated protein [uncultured marine bacterium
           Ant24C4]
          Length = 478

 Score = 37.2 bits (84), Expect = 1.9,   Method: Composition-based stats.
 Identities = 5/35 (14%), Positives = 16/35 (45%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            +S  E+ +++ + Q + +   +I   +  M   +
Sbjct: 442 VDSDQELQRLLRIEQSYAANARVIQTLDAMMSRLL 476


>gi|159045787|ref|YP_001534581.1| flagellar basal body rod protein FlgB [Dinoroseobacter shibae DFL
          12]
 gi|157913547|gb|ABV94980.1| flagellar basal-body rod protein FlgB [Dinoroseobacter shibae DFL
          12]
          Length = 126

 Score = 37.2 bits (84), Expect = 2.0,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 31/85 (36%), Gaps = 5/85 (5%)

Query: 5  FNIGLAAQLALEQ-RLSTVADNMSNTDTVGFR-TIKVKFSEVVGAIKNDIDQKISFVASG 62
           N   +A +A    R   +A N+++ DT G+R      F++    + +      +     
Sbjct: 7  LNTA-SAMVAHANERHGVIARNIAHADTPGYRTQDLKDFTDSYREMTSSG--LRATRDDH 63

Query: 63 KEYLSKEVGSFISTGTELDFALEGD 87
               + +   + T  +   A  G+
Sbjct: 64 AFGAHRGLDLSVQTVLDTPVAPNGN 88


>gi|323495371|ref|ZP_08100448.1| flagellar hook-associated protein FlgK [Vibrio brasiliensis LMG
           20546]
 gi|323310294|gb|EGA63481.1| flagellar hook-associated protein FlgK [Vibrio brasiliensis LMG
           20546]
          Length = 568

 Score = 37.2 bits (84), Expect = 2.0,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 13/37 (35%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N   E   M+   Q + + + ++     +    +
Sbjct: 529 SGVNLDEEAANMMKFQQAYMASSRIMQAANDTFNTIL 565


>gi|320535378|ref|ZP_08035492.1| flagellar basal-body rod protein FlgB [Treponema phagedenis
          F0421]
 gi|320147780|gb|EFW39282.1| flagellar basal-body rod protein FlgB [Treponema phagedenis
          F0421]
          Length = 136

 Score = 37.2 bits (84), Expect = 2.0,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 17/41 (41%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51
          A      R +  A+N++N +   F+  +V F   +    + 
Sbjct: 14 ALDVNALRYTVTANNLANAEVPEFKRTEVSFESELKRALDS 54


>gi|83311102|ref|YP_421366.1| hypothetical protein amb2003 [Magnetospirillum magneticum AMB-1]
 gi|82945943|dbj|BAE50807.1| hypothetical protein [Magnetospirillum magneticum AMB-1]
          Length = 100

 Score = 37.2 bits (84), Expect = 2.0,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 17/40 (42%), Gaps = 2/40 (5%)

Query: 1  MQTSFN--IGLAAQLALEQRLSTVADNMSNTDTVGFRTIK 38
          M +S      L+      +   T A+N++N  T  ++  +
Sbjct: 1  MISSIASTTLLSGLATQSRVAQTAANNIANLTTPDYQAER 40


>gi|144900469|emb|CAM77333.1| flagellar basal-body rod protein FlgB [Magnetospirillum
          gryphiswaldense MSR-1]
          Length = 132

 Score = 37.2 bits (84), Expect = 2.1,   Method: Composition-based stats.
 Identities = 7/44 (15%), Positives = 21/44 (47%), Gaps = 3/44 (6%)

Query: 8  GLAAQLALEQRLSTVADNMSNTDTVGF--RTIKV-KFSEVVGAI 48
            +    + +R   +++N++N +T  +  + +K   F +V+   
Sbjct: 11 AQSRMDWIARRQEVLSENIANANTPKYIPKDLKPYNFKDVLDQS 54


>gi|291531969|emb|CBK97554.1| flagellar hook-associated protein FlgK [Eubacterium siraeum 70/3]
          Length = 503

 Score = 37.2 bits (84), Expect = 2.2,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 25/84 (29%), Gaps = 1/84 (1%)

Query: 14 ALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSF 73
            ++ L    +N+SN DTVG+   ++          N I                  G  
Sbjct: 1  MAQKALDVTGNNLSNRDTVGYTRQRLDVYSSYM-NMNGIYTTKLARLGLSSQGVFASGVS 59

Query: 74 ISTGTELDFALEGDAWFALESPRG 97
           +    LD     +  F  E  + 
Sbjct: 60 QTRDDYLDKRYRDNNCFVAEYNQQ 83


>gi|229160707|ref|ZP_04288699.1| Flagellar basal-body rod protein [Bacillus cereus R309803]
 gi|228622722|gb|EEK79556.1| Flagellar basal-body rod protein [Bacillus cereus R309803]
          Length = 154

 Score = 37.2 bits (84), Expect = 2.2,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 28/72 (38%)

Query: 12  QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
              L  + +TV+ N++N +T G++   V F+E +           S + S  +       
Sbjct: 31  MNYLVTKRNTVSSNIANANTPGYQAQDVTFAEQMNKSSALYKSNSSDLNSNPDLYQTNEM 90

Query: 72  SFISTGTELDFA 83
              +   +  +A
Sbjct: 91  HLPTVNMKNTYA 102


>gi|329898291|ref|ZP_08272374.1| Flagellar basal-body rod protein FlgC [gamma proteobacterium
          IMCC3088]
 gi|328920856|gb|EGG28299.1| Flagellar basal-body rod protein FlgC [gamma proteobacterium
          IMCC3088]
          Length = 141

 Score = 37.2 bits (84), Expect = 2.2,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 20/47 (42%), Gaps = 6/47 (12%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVV 45
          F+I  +A      RL   A NM+N   V       ++  +V F  V+
Sbjct: 7  FDIAGSALAGQTTRLHATASNMANASNVSSTAEDAYKAKRVVFRTVL 53


>gi|229160702|ref|ZP_04288694.1| Flagellar hook-associated protein FlgK [Bacillus cereus R309803]
 gi|228622717|gb|EEK79551.1| Flagellar hook-associated protein FlgK [Bacillus cereus R309803]
          Length = 432

 Score = 37.2 bits (84), Expect = 2.3,   Method: Composition-based stats.
 Identities = 5/34 (14%), Positives = 12/34 (35%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237
            N   EM  ++   + F + +  I+   +     
Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAINTMNEVFDSL 427



 Score = 36.8 bits (83), Expect = 2.6,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 16/35 (45%)

Query: 6  NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
          N  L+  LA +  L T   N+SN  T G+    V 
Sbjct: 7  NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQAVN 41


>gi|254473300|ref|ZP_05086697.1| flagellar hook-associated protein FlgK [Pseudovibrio sp. JE062]
 gi|211957416|gb|EEA92619.1| flagellar hook-associated protein FlgK [Pseudovibrio sp. JE062]
          Length = 479

 Score = 37.2 bits (84), Expect = 2.3,   Method: Composition-based stats.
 Identities = 5/48 (10%), Positives = 19/48 (39%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50
          ++     ++  A    ++  + N++N +  G+   +     +V    +
Sbjct: 5  SAMLTAQSSIAARSAEMAIASRNVANVNNPGYSRQEAVVQNIVSDTGS 52


>gi|296447441|ref|ZP_06889366.1| flagellar basal body rod protein FlgB [Methylosinus trichosporium
          OB3b]
 gi|296255061|gb|EFH02163.1| flagellar basal body rod protein FlgB [Methylosinus trichosporium
          OB3b]
          Length = 127

 Score = 36.8 bits (83), Expect = 2.4,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 26/67 (38%), Gaps = 1/67 (1%)

Query: 15 LEQRLSTVADNMSNTDTVGFRT-IKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSF 73
          L  R + VA N++N ++ G+R      F++V+      + +  S       +  +     
Sbjct: 18 LSARQALVAQNVANANSPGYRAVDLAPFTKVLDQSGLQMSETNSLHVQSAAFDPQAASPK 77

Query: 74 ISTGTEL 80
            T  E 
Sbjct: 78 ERTAWET 84


>gi|255022068|ref|ZP_05294074.1| hypothetical protein ACA_0862 [Acidithiobacillus caldus ATCC
          51756]
 gi|254968554|gb|EET26110.1| hypothetical protein ACA_0862 [Acidithiobacillus caldus ATCC
          51756]
          Length = 120

 Score = 36.8 bits (83), Expect = 2.4,   Method: Composition-based stats.
 Identities = 6/48 (12%), Positives = 22/48 (45%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65
          +L  ++ +++N  T G++   + F+  + +       ++  ++    Y
Sbjct: 20 QLDVLSSDLANASTPGYKATNLDFARALRSALAAPGDQLGDLSRYVRY 67


>gi|90577341|ref|ZP_01233152.1| flagellar basal body rod protein [Vibrio angustum S14]
 gi|90440427|gb|EAS65607.1| flagellar basal body rod protein [Vibrio angustum S14]
          Length = 120

 Score = 36.8 bits (83), Expect = 2.4,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 33/85 (38%), Gaps = 1/85 (1%)

Query: 17  QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76
           QR   +A N++N DT G+    ++F  +V  I+    QK        +  +    +    
Sbjct: 21  QRAKVLASNLANVDTPGYLAKDIRFDAIVSQIEVGKVQKSPTQLVVSDGYAVPYQNSK-D 79

Query: 77  GTELDFALEGDAWFALESPRGIILT 101
           G  ++ ++E   +          LT
Sbjct: 80  GNTVELSVEQAKFTKNNMDFQSSLT 104


>gi|15964412|ref|NP_384765.1| flagellar basal body rod protein FlgB [Sinorhizobium meliloti
          1021]
 gi|307311554|ref|ZP_07591195.1| flagellar basal body rod protein FlgB [Sinorhizobium meliloti
          BL225C]
 gi|307318909|ref|ZP_07598340.1| flagellar basal body rod protein FlgB [Sinorhizobium meliloti
          AK83]
 gi|3894106|emb|CAA11959.1| flagellar basal-body rod protein [Sinorhizobium meliloti]
 gi|15073589|emb|CAC45231.1| Flagellar basal-body rod protein [Sinorhizobium meliloti 1021]
 gi|306895323|gb|EFN26078.1| flagellar basal body rod protein FlgB [Sinorhizobium meliloti
          AK83]
 gi|306899571|gb|EFN30200.1| flagellar basal body rod protein FlgB [Sinorhizobium meliloti
          BL225C]
          Length = 126

 Score = 36.8 bits (83), Expect = 2.4,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 17/33 (51%), Gaps = 1/33 (3%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIK 49
          R + VA N++N +T  +R   V+ F  V+    
Sbjct: 20 RQNVVAGNIANANTPHYRAKDVQPFESVLQNTG 52


>gi|153949189|ref|YP_001399631.1| flagellar basal-body rod protein FlgB [Yersinia pseudotuberculosis
           IP 31758]
 gi|152960684|gb|ABS48145.1| flagellar basal-body rod protein FlgB [Yersinia pseudotuberculosis
           IP 31758]
          Length = 121

 Score = 36.8 bits (83), Expect = 2.4,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 29/91 (31%)

Query: 11  AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
           A      R   ++ N++N +T  F+   + F+  +   K       S   +  +   ++ 
Sbjct: 15  AMQLRLTRAELLSANLANVNTPNFQAKDIDFAAEMQRAKRGNGVMASSDLTSPKIKYRQP 74

Query: 71  GSFISTGTELDFALEGDAWFALESPRGIILT 101
                 G  +   +E   +          L+
Sbjct: 75  YQPSLDGNTVALNVEQAEFSKNALDYQTSLS 105


>gi|120598229|ref|YP_962803.1| flagellar basal body rod protein FlgB [Shewanella sp. W3-18-1]
 gi|120558322|gb|ABM24249.1| flagellar basal-body rod protein FlgB [Shewanella sp. W3-18-1]
          Length = 134

 Score = 36.8 bits (83), Expect = 2.4,   Method: Composition-based stats.
 Identities = 8/25 (32%), Positives = 14/25 (56%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVKFS 42
          R   ++ N++N DT  ++   V FS
Sbjct: 22 RAEVISSNIANADTPHYKARDVDFS 46


>gi|146343395|ref|YP_001208443.1| putative flagellar basal-body rod protein (flgC) [Bradyrhizobium
          sp. ORS278]
 gi|146196201|emb|CAL80228.1| putative flagellar basal-body rod protein (flgC) [Bradyrhizobium
          sp. ORS278]
          Length = 136

 Score = 36.8 bits (83), Expect = 2.4,   Method: Composition-based stats.
 Identities = 8/33 (24%), Positives = 15/33 (45%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG 33
          M    +  ++   A  +RL   A N++N  + G
Sbjct: 1  MSPIASNAVSGMNAAARRLEVSASNVANARSTG 33


>gi|126738583|ref|ZP_01754288.1| flagellar basal-body rod protein; FlgB [Roseobacter sp.
          SK209-2-6]
 gi|126720382|gb|EBA17088.1| flagellar basal-body rod protein; FlgB [Roseobacter sp.
          SK209-2-6]
          Length = 129

 Score = 36.8 bits (83), Expect = 2.4,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 23/52 (44%), Gaps = 1/52 (1%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIKNDI 52
             F I  +      +R + V++N++N DT G+    +K F E+  +     
Sbjct: 5  LNVFKIAYSMATHAGKRQALVSENIANADTPGYHAKDIKPFKEIYASGTRPG 56


>gi|85710162|ref|ZP_01041227.1| flagellar cell-proximal portion protein [Erythrobacter sp. NAP1]
 gi|85688872|gb|EAQ28876.1| flagellar cell-proximal portion protein [Erythrobacter sp. NAP1]
          Length = 125

 Score = 36.8 bits (83), Expect = 2.5,   Method: Composition-based stats.
 Identities = 6/36 (16%), Positives = 19/36 (52%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +   EM +++   +++ ++   +   ++ MLE +R
Sbjct: 88  VDESAEMVEIMDSARQYQNMVQALQTAKQLMLETLR 123


>gi|149908753|ref|ZP_01897414.1| putative flagellar hook-associated protein [Moritella sp. PE36]
 gi|149808295|gb|EDM68234.1| putative flagellar hook-associated protein [Moritella sp. PE36]
          Length = 443

 Score = 36.8 bits (83), Expect = 2.5,   Method: Composition-based stats.
 Identities = 7/38 (18%), Positives = 15/38 (39%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           S  N   E   ++   Q +N+   +I   ++     +R
Sbjct: 404 SGVNLDEEGISLMKYQQSYNANAKVISMADQLFSTLLR 441


>gi|148554183|ref|YP_001261765.1| flagellar hook-associated protein FlgK [Sphingomonas wittichii
          RW1]
 gi|148499373|gb|ABQ67627.1| flagellar hook-associated protein FlgK [Sphingomonas wittichii
          RW1]
          Length = 450

 Score = 36.8 bits (83), Expect = 2.5,   Method: Composition-based stats.
 Identities = 15/43 (34%), Positives = 23/43 (53%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
          M     IG +  +A    L+TV +N+SN +T G+   KV  +E
Sbjct: 1  MSDLLQIGRSGVVAYRTALATVGENVSNAETEGYSRRKVVLNE 43


>gi|302037601|ref|YP_003797923.1| flagellar basal-body rod protein FlgB [Candidatus Nitrospira
          defluvii]
 gi|300605665|emb|CBK41998.1| Flagellar basal-body rod protein FlgB [Candidatus Nitrospira
          defluvii]
          Length = 135

 Score = 36.8 bits (83), Expect = 2.5,   Method: Composition-based stats.
 Identities = 10/65 (15%), Positives = 23/65 (35%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTG 77
          R   +A N++N +T  +R   + F + +   +           + + +  +  G     G
Sbjct: 21 RQQVIAANIANEETPKYRAKDLNFGQALANAQQGKLPISLVSTNAQHFGPQGTGYQRVLG 80

Query: 78 TELDF 82
             D 
Sbjct: 81 QLEDV 85


>gi|325474122|gb|EGC77310.1| hypothetical protein HMPREF9353_01660 [Treponema denticola F0402]
          Length = 270

 Score = 36.8 bits (83), Expect = 2.6,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 53/180 (29%), Gaps = 28/180 (15%)

Query: 28  NTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGD 87
           N +T+G++                       + + +       G       +L FAL GD
Sbjct: 35  NINTIGYK----------------------PIKTIQNNYVFTQGHLSEFKADLSFALVGD 72

Query: 88  AWFALESP-RGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG 146
            +F + +        R   F + + G   + +  Y    + +    I +     +     
Sbjct: 73  GFFKVYNEKEEEFYMRCCFFIINEYGKFQTYNNMYLSKYINNNNKIINKAYVESSGKLIV 132

Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANS 206
               +      + LY  D        EN         +  + + G     GF+E S  ++
Sbjct: 133 TYDDQTTESIMIELYVPDNGS-----ENICFGNYYSFSKSKRIEGTKFLNGFIELSAVDA 187


>gi|27904802|ref|NP_777928.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str. Bp
           (Baizongia pistaciae)]
 gi|46395818|sp|Q89AH9|FLGC_BUCBP RecName: Full=Flagellar basal-body rod protein flgC
 gi|27904200|gb|AAO27033.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str. Bp
           (Baizongia pistaciae)]
          Length = 136

 Score = 36.8 bits (83), Expect = 2.6,   Method: Composition-based stats.
 Identities = 9/76 (11%), Positives = 30/76 (39%)

Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223
           + + G V+        +   +     S +    G+ + SN + M E    I  ++ + + 
Sbjct: 58  ENNVGGVKMHTVAGDTSSLKSIYNPNSPIADSNGYSKVSNVDIMSETINAITASKNYQTN 117

Query: 224 TTLIDENEKSMLEAIR 239
             +++  +  +++ + 
Sbjct: 118 LEILNTTKNMIMKTLT 133


>gi|328545490|ref|YP_004305599.1| flagellar hook-associated protein K [polymorphum gilvum
          SL003B-26A1]
 gi|326415231|gb|ADZ72294.1| Flagellar hook-associated protein K [Polymorphum gilvum
          SL003B-26A1]
          Length = 496

 Score = 36.8 bits (83), Expect = 2.6,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 29/81 (35%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
          +  +  +A  A +   +TV+ N++     G+    V  S VV A       ++  +A   
Sbjct: 6  ALQVAQSALAARQTETATVSRNIAGAQDPGYTRKSVVLSTVVSASGQTGGVRVDGIARTT 65

Query: 64 EYLSKEVGSFISTGTELDFAL 84
          +          ++      A+
Sbjct: 66 DSALYNSLVRATSVATSQQAI 86


>gi|258404781|ref|YP_003197523.1| flagellar basal-body rod protein FlgB [Desulfohalobium retbaense
          DSM 5692]
 gi|257797008|gb|ACV67945.1| flagellar basal-body rod protein FlgB [Desulfohalobium retbaense
          DSM 5692]
          Length = 136

 Score = 36.8 bits (83), Expect = 2.6,   Method: Composition-based stats.
 Identities = 11/80 (13%), Positives = 24/80 (30%), Gaps = 5/80 (6%)

Query: 2  QTSFNIGLAAQLALEQRL-----STVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56
                     L     L       +  N++N +T G+ +  ++F E + A  +   QK+
Sbjct: 3  DNVLFGSTIGLLEQSLNLRARNHEMLTSNIANAETPGYASQHLQFEEQLRAAFDPEAQKM 62

Query: 57 SFVASGKEYLSKEVGSFIST 76
                      ++      
Sbjct: 63 EATHEDHFGFVDDINQVDGE 82


>gi|315498436|ref|YP_004087240.1| flagellar basal-body rod protein flgb [Asticcacaulis excentricus
          CB 48]
 gi|315416448|gb|ADU13089.1| flagellar basal-body rod protein FlgB [Asticcacaulis excentricus
          CB 48]
          Length = 137

 Score = 36.8 bits (83), Expect = 2.7,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 23/63 (36%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
             L QR   VA N++N  T GF+   +K  +    +K   +Q    ++          G
Sbjct: 16 MTWLGQRQKLVAQNVANASTPGFKPRDLKALDFASVLKGQQEQTELGLSVTNAGHMNVEG 75

Query: 72 SFI 74
             
Sbjct: 76 GNN 78


>gi|326404526|ref|YP_004284608.1| flagellar basal-body rod protein FlgB [Acidiphilium multivorum
          AIU301]
 gi|325051388|dbj|BAJ81726.1| flagellar basal-body rod protein FlgB [Acidiphilium multivorum
          AIU301]
          Length = 126

 Score = 36.8 bits (83), Expect = 2.8,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 22/50 (44%), Gaps = 1/50 (2%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIK-VKFSEVVGAIKN 50
               +     + L Q  S +A N++N DT G+ +   V FS+ +    N
Sbjct: 3  LNLIGLAADRLVYLAQSQSVLAQNIANIDTPGYVSRMPVAFSDTLNGTGN 52


>gi|218662054|ref|ZP_03517984.1| hypothetical protein RetlI_22525 [Rhizobium etli IE4771]
          Length = 88

 Score = 36.8 bits (83), Expect = 2.8,   Method: Composition-based stats.
 Identities = 6/23 (26%), Positives = 13/23 (56%)

Query: 12 QLALEQRLSTVADNMSNTDTVGF 34
            A   R+  +A+N++N+ T  +
Sbjct: 1  MRAQTTRIGAIANNIANSSTPDY 23


>gi|257141419|ref|ZP_05589681.1| flagellar basal-body rod protein FlgB [Burkholderia thailandensis
           E264]
          Length = 109

 Score = 36.8 bits (83), Expect = 2.8,   Method: Composition-based stats.
 Identities = 14/92 (15%), Positives = 28/92 (30%), Gaps = 2/92 (2%)

Query: 12  QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71
                +R   +A N++N DT G++   + F   +              A           
Sbjct: 1   MKLRAERTKIIASNLANLDTPGYQAQDLDFKRSLAEAAGGGAGARLGDAPAGGVTLGYRV 60

Query: 72  SFI--STGTELDFALEGDAWFALESPRGIILT 101
            +     G  ++  +E  A+        + LT
Sbjct: 61  PYQAAQDGNTVELGIEQAAFAQNAIDFQMSLT 92


>gi|88811798|ref|ZP_01127052.1| flagellar basal body rod protein [Nitrococcus mobilis Nb-231]
 gi|88791189|gb|EAR22302.1| flagellar basal body rod protein [Nitrococcus mobilis Nb-231]
          Length = 131

 Score = 36.8 bits (83), Expect = 2.8,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54
            A   +L  +A N++N DT  ++     FS V+   + D   
Sbjct: 18 LRAKRTQL--LASNIANADTPHYKARDFDFSNVLHQARADNAT 58


>gi|296531770|ref|ZP_06894592.1| flagellar basal-body rod protein [Roseomonas cervicalis ATCC
          49957]
 gi|296267909|gb|EFH13714.1| flagellar basal-body rod protein [Roseomonas cervicalis ATCC
          49957]
          Length = 133

 Score = 36.8 bits (83), Expect = 2.9,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 3/42 (7%)

Query: 1  MQTSFN---IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39
          M    +   I  A    L +R + +A N+++ DT  +R   V
Sbjct: 1  MLDGIDVFRISGARMRHLAERQNVLAQNIAHADTPLYRARDV 42


>gi|241889275|ref|ZP_04776578.1| conserved hypothetical protein [Gemella haemolysans ATCC 10379]
 gi|241864112|gb|EER68491.1| conserved hypothetical protein [Gemella haemolysans ATCC 10379]
          Length = 462

 Score = 36.8 bits (83), Expect = 2.9,   Method: Composition-based stats.
 Identities = 12/103 (11%), Positives = 24/103 (23%)

Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166
           +     +  +  G  P     +       +    N    G+           G       
Sbjct: 287 QAPQGFNPNAQHGGQPQGFNPNAQHGGQPQGFNPNAQHGGQPQGFNPNAQHGGQPQGFNP 346

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYE 209
                 +  G +PN              ++G  E +  N + E
Sbjct: 347 NAQHGGQPQGFNPNTQHGGQPQGFNPNAQQGVQEQAVVNEVQE 389


>gi|218460744|ref|ZP_03500835.1| flagellar basal body rod protein FlgB [Rhizobium etli Kim 5]
          Length = 142

 Score = 36.8 bits (83), Expect = 2.9,   Method: Composition-based stats.
 Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 1/29 (3%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVK-FSEVV 45
          R   VA N++N +T  FR   V  F  V+
Sbjct: 20 RQQVVAGNIANANTPKFRAKDVTPFDAVL 48


>gi|331006031|ref|ZP_08329373.1| Flagellar basal-body rod protein FlgB [gamma proteobacterium
          IMCC1989]
 gi|330420160|gb|EGG94484.1| Flagellar basal-body rod protein FlgB [gamma proteobacterium
          IMCC1989]
          Length = 133

 Score = 36.8 bits (83), Expect = 2.9,   Method: Composition-based stats.
 Identities = 10/64 (15%), Positives = 22/64 (34%)

Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIS 75
            R   +A+N++N DT G++   + F  ++G              +   + +    S   
Sbjct: 20 SDRAGLLAENLANADTPGYKAKDIDFKGILGGQVQMQSSGNQMKTTHSNHFAITNNSSEY 79

Query: 76 TGTE 79
              
Sbjct: 80 DMLY 83


>gi|254522823|ref|ZP_05134878.1| conserved hypothetical protein [Stenotrophomonas sp. SKA14]
 gi|219720414|gb|EED38939.1| conserved hypothetical protein [Stenotrophomonas sp. SKA14]
          Length = 99

 Score = 36.8 bits (83), Expect = 2.9,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 13/32 (40%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32
          M     + L    A +Q +   A N++N  T 
Sbjct: 1  MNNVMGMALGGMRAAQQGVQVAAHNVANLATP 32


>gi|238762362|ref|ZP_04623333.1| Flagellar basal-body rod protein FlgB [Yersinia kristensenii ATCC
           33638]
 gi|238699347|gb|EEP92093.1| Flagellar basal-body rod protein FlgB [Yersinia kristensenii ATCC
           33638]
          Length = 124

 Score = 36.8 bits (83), Expect = 3.0,   Method: Composition-based stats.
 Identities = 13/100 (13%), Positives = 30/100 (30%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           Q +  +  AA      R   ++ N++N +T  F+   + F   +   K       +    
Sbjct: 9   QKALGVHPAAMQLRLTRAELLSANLANVNTPNFQAKDIDFGAEMQRAKQGSVGIATSQRL 68

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101
             +   +        G  +   +E   +          L+
Sbjct: 69  SPQMKYRLPYQPSQDGNTVALNVEQAEFSKNALDYQTSLS 108


>gi|312115252|ref|YP_004012848.1| flagellar basal body rod protein [Rhodomicrobium vannielii ATCC
          17100]
 gi|311220381|gb|ADP71749.1| flagellar basal body rod protein [Rhodomicrobium vannielii ATCC
          17100]
          Length = 124

 Score = 36.8 bits (83), Expect = 3.0,   Method: Composition-based stats.
 Identities = 10/63 (15%), Positives = 23/63 (36%), Gaps = 1/63 (1%)

Query: 21 TVADNMSNTDTVGFRTIKVK-FSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTE 79
           +A N++N +T G++   +  F  V+  I+  +          +           + G E
Sbjct: 21 VLAQNVANANTPGYKAANIVPFEAVMHDIRLQMTSTSPMHLRAEVSQISSTAQEDAAGGE 80

Query: 80 LDF 82
            +
Sbjct: 81 TFY 83


>gi|57167573|ref|ZP_00366713.1| flagellar basal-body rod protein FlgB [Campylobacter coli RM2228]
 gi|305433079|ref|ZP_07402235.1| flagellar basal-body rod protein FlgB [Campylobacter coli JV20]
 gi|57020695|gb|EAL57359.1| flagellar basal-body rod protein FlgB [Campylobacter coli RM2228]
 gi|304443780|gb|EFM36437.1| flagellar basal-body rod protein FlgB [Campylobacter coli JV20]
          Length = 143

 Score = 36.8 bits (83), Expect = 3.0,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 19/43 (44%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          +A      R   +  N++N DT  ++   ++F   +    N+I
Sbjct: 13 SALAGRNLRNQLINANLANVDTPFYKARDIEFETALVNRANEI 55


>gi|308050027|ref|YP_003913593.1| flagellar basal-body rod protein FlgB [Ferrimonas balearica DSM
          9799]
 gi|307632217|gb|ADN76519.1| flagellar basal-body rod protein FlgB [Ferrimonas balearica DSM
          9799]
          Length = 116

 Score = 36.8 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 7/69 (10%), Positives = 24/69 (34%)

Query: 21 TVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTEL 80
           ++ N++N +T G+    + FS ++  ++       ++  + +               + 
Sbjct: 25 VLSGNLANAETPGYLARDLDFSRLMTQLERGQATDRNYDHAYRVPYQTSADGNTVELGQE 84

Query: 81 DFALEGDAW 89
                +A 
Sbjct: 85 QARFSQNAM 93


>gi|304392509|ref|ZP_07374449.1| flagellar basal-body rod protein FlgB [Ahrensia sp. R2A130]
 gi|303295139|gb|EFL89499.1| flagellar basal-body rod protein FlgB [Ahrensia sp. R2A130]
          Length = 133

 Score = 36.8 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 21/49 (42%), Gaps = 1/49 (2%)

Query: 16 EQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIKNDIDQKISFVASGK 63
          E R   VA N+++ DT GFR   V  F+ ++ A    +    +      
Sbjct: 31 EARQKVVAANIAHADTPGFRGSDVAPFASLMSADAKPVGMATTHAGHMV 79


>gi|149184205|ref|ZP_01862523.1| flagellar basal-body rod protein FlgC [Erythrobacter sp. SD-21]
 gi|148831525|gb|EDL49958.1| flagellar basal-body rod protein FlgC [Erythrobacter sp. SD-21]
          Length = 113

 Score = 36.4 bits (82), Expect = 3.2,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 20/36 (55%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +   EM +M+  ++++ ++   +   ++ MLE +R
Sbjct: 76  VDENAEMVEMLEASRQYRNMVEALSTAKQLMLETMR 111


>gi|288553068|ref|YP_003425003.1| flagellar basal body rod protein FlgB [Bacillus pseudofirmus OF4]
 gi|288544228|gb|ADC48111.1| flagellar basal body rod protein FlgB [Bacillus pseudofirmus OF4]
          Length = 131

 Score = 36.4 bits (82), Expect = 3.2,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 16/40 (40%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50
               + R   ++DN++N  T  ++  KV F   +     
Sbjct: 15 GLDGSQLRQRAISDNIANAGTPNYQAKKVSFKHTLNEAMG 54


>gi|298530765|ref|ZP_07018167.1| protein of unknown function DUF1078 domain protein
          [Desulfonatronospira thiodismutans ASO3-1]
 gi|298510139|gb|EFI34043.1| protein of unknown function DUF1078 domain protein
          [Desulfonatronospira thiodismutans ASO3-1]
          Length = 124

 Score = 36.4 bits (82), Expect = 3.2,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 17/45 (37%), Gaps = 3/45 (6%)

Query: 8  GLAAQLALEQ---RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK 49
           ++   A +    R    A N++N +T GF   +V   E      
Sbjct: 4  SISGMGAFQSFGLRQQASAHNVANVNTRGFEPSRVVLEEAPEHQG 48


>gi|309388244|gb|ADO78728.1| RNA-dependent RNA polymerase [Rotavirus A
           human/Belgium/BE00031/2008/G1P[8]]
          Length = 1088

 Score = 36.4 bits (82), Expect = 3.2,   Method: Composition-based stats.
 Identities = 10/79 (12%), Positives = 27/79 (34%), Gaps = 3/79 (3%)

Query: 1   MQTSFNIGLAA-QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFV 59
           M  +    L++   A+   L   +++++N + + ++     F  +V +  N         
Sbjct: 130 MDPAILTSLSSNLNAVMFWLERHSNDVANANKI-YKRRLDLF-TIVASTINKYGVPRHNE 187

Query: 60  ASGKEYLSKEVGSFISTGT 78
               EY   +   +     
Sbjct: 188 KYRYEYEVMKDKPYYLVTW 206


>gi|283784870|ref|YP_003364735.1| flagellar hook-associated protein 1 [Citrobacter rodentium
          ICC168]
 gi|282948324|emb|CBG87909.1| flagellar hook-associated protein 1 [Citrobacter rodentium
          ICC168]
          Length = 546

 Score = 36.4 bits (82), Expect = 3.2,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          M + FN  ++   A +  L T ++N+++ +  G+       ++    +    
Sbjct: 1  MSSLFNNAMSGLNAAQAALVTASNNINSYNVAGYTRQTTIMAQANSTLGAGG 52


>gi|167750617|ref|ZP_02422744.1| hypothetical protein EUBSIR_01594 [Eubacterium siraeum DSM 15702]
 gi|167656296|gb|EDS00426.1| hypothetical protein EUBSIR_01594 [Eubacterium siraeum DSM 15702]
          Length = 519

 Score = 36.4 bits (82), Expect = 3.2,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 26/85 (30%), Gaps = 1/85 (1%)

Query: 13 LALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGS 72
             ++ L    +N+SN DTVG+   ++          N I                  G 
Sbjct: 16 QMAQKALDVTGNNLSNRDTVGYTRQRLDVYSSYM-NMNGIYTTKLARLGLSSQGVFASGV 74

Query: 73 FISTGTELDFALEGDAWFALESPRG 97
            +    LD     ++ +  E  + 
Sbjct: 75 SQTRDDYLDKRYRDNSCYVSEYNQQ 99


>gi|74101655|gb|AAZ99745.1| FlgBL [Aeromonas hydrophila]
          Length = 129

 Score = 36.4 bits (82), Expect = 3.2,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 32/80 (40%), Gaps = 4/80 (5%)

Query: 1  MQTSFNIGLA----AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56
          M  SF+  L     A      R   +A N++N DT G+    V +  ++G +   +    
Sbjct: 1  MSISFDSALGVHPYALDVRADRARILAGNLANVDTPGYLARDVDYKTILGRVAQQVATGD 60

Query: 57 SFVASGKEYLSKEVGSFIST 76
          +  A  +  ++ ++   +  
Sbjct: 61 ASAAISQGVMANDMQHPLYR 80


>gi|89068727|ref|ZP_01156113.1| flagellar hook-associated protein [Oceanicola granulosus
          HTCC2516]
 gi|89045690|gb|EAR51752.1| flagellar hook-associated protein [Oceanicola granulosus
          HTCC2516]
          Length = 470

 Score = 36.4 bits (82), Expect = 3.3,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 18/37 (48%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39
           + + G +  LA+ +   T A N++N  T G+    V
Sbjct: 5  NALSAGRSGLLAVSRWSETTAGNVANAKTQGYVRRDV 41


>gi|148261125|ref|YP_001235252.1| flagellar basal body protein-like protein [Acidiphilium cryptum
          JF-5]
 gi|146402806|gb|ABQ31333.1| Flagellar basal body protein-like protein [Acidiphilium cryptum
          JF-5]
          Length = 126

 Score = 36.4 bits (82), Expect = 3.3,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 22/50 (44%), Gaps = 1/50 (2%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIK-VKFSEVVGAIKN 50
               +     + L Q  S +A N++N DT G+ +   V FS+ +    N
Sbjct: 3  LNLIGLAADRLVYLAQSQSVLAQNIANIDTPGYVSRMPVAFSDTLNGTGN 52


>gi|57238272|ref|YP_178647.1| flagellar basal body rod protein FlgB [Campylobacter jejuni
          RM1221]
 gi|148925899|ref|ZP_01809586.1| putative flagellar basal-body rod protein [Campylobacter jejuni
          subsp. jejuni CG8486]
 gi|205355384|ref|ZP_03222155.1| putative flagellar basaL body rod protein [Campylobacter jejuni
          subsp. jejuni CG8421]
 gi|57167076|gb|AAW35855.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni
          RM1221]
 gi|145844885|gb|EDK21989.1| putative flagellar basal-body rod protein [Campylobacter jejuni
          subsp. jejuni CG8486]
 gi|205346618|gb|EDZ33250.1| putative flagellar basaL body rod protein [Campylobacter jejuni
          subsp. jejuni CG8421]
 gi|284925791|gb|ADC28143.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni
          subsp. jejuni IA3902]
 gi|315057946|gb|ADT72275.1| Flagellar basal-body rod protein FlgB [Campylobacter jejuni
          subsp. jejuni S3]
          Length = 143

 Score = 36.4 bits (82), Expect = 3.3,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 20/45 (44%), Gaps = 1/45 (2%)

Query: 9  LAAQLALEQ-RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          +   LA    R   +  N++N DT  ++   ++F   +    N+I
Sbjct: 11 VTGALAGRNLRNQLINANLANVDTPFYKARDIEFETALVNRANEI 55


>gi|300722685|ref|YP_003711975.1| flagellar basal-body rod cell-proximal protein [Xenorhabdus
          nematophila ATCC 19061]
 gi|297629192|emb|CBJ89788.1| flagellar biosynthesis; cell-proximal portion of basal-body rod
          [Xenorhabdus nematophila ATCC 19061]
          Length = 138

 Score = 36.4 bits (82), Expect = 3.3,   Method: Composition-based stats.
 Identities = 8/60 (13%), Positives = 19/60 (31%)

Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76
          QR   ++ N++N DT G++   + F+  +           + +                 
Sbjct: 21 QRQEILSANIANADTPGYQARDIDFAAQLKKTMAHGRVTGNGIGLTLTSERHIPIQPQKR 80


>gi|296122953|ref|YP_003630731.1| flagellar hook-associated protein FlgK [Planctomyces limnophilus
          DSM 3776]
 gi|296015293|gb|ADG68532.1| flagellar hook-associated protein FlgK [Planctomyces limnophilus
          DSM 3776]
          Length = 566

 Score = 36.4 bits (82), Expect = 3.4,   Method: Composition-based stats.
 Identities = 6/37 (16%), Positives = 15/37 (40%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
          +  +   +       +   ++N++N +T GF    V 
Sbjct: 6  ALAVASRSLEIFSASVQVSSNNIANANTKGFVRDAVS 42


>gi|145297452|ref|YP_001140293.1| lateral flagellar basal body protein, LfgB [Aeromonas salmonicida
          subsp. salmonicida A449]
 gi|142850224|gb|ABO88545.1| lateral flagellar basal body protein, LfgB [Aeromonas salmonicida
          subsp. salmonicida A449]
          Length = 129

 Score = 36.4 bits (82), Expect = 3.4,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 32/80 (40%), Gaps = 4/80 (5%)

Query: 1  MQTSFNIGLA----AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56
          M  SF+  L     A      R   +A N++N DT G+    V +  ++G +   +    
Sbjct: 1  MSISFDSALGVHPYALDVRADRARILAGNLANVDTPGYLARDVDYKTILGRVAQQVATGD 60

Query: 57 SFVASGKEYLSKEVGSFIST 76
          +  +  +  ++ ++   +  
Sbjct: 61 ASASISQGVMANDMQHPLYR 80


>gi|110632659|ref|YP_672867.1| flagellar basal body rod protein FlgB [Mesorhizobium sp. BNC1]
 gi|110283643|gb|ABG61702.1| flagellar basal-body rod protein flgB [Chelativorans sp. BNC1]
          Length = 135

 Score = 36.4 bits (82), Expect = 3.4,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 1/36 (2%)

Query: 15 LEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIK 49
          L  R + VA N++N +T  ++ + V+ F +V+   +
Sbjct: 27 LSVRQAAVAGNIANINTPSYKALDVEPFEKVLDGTR 62


>gi|295097205|emb|CBK86295.1| flagellar basal-body rod protein FlgC [Enterobacter cloacae
          subsp. cloacae NCTC 9394]
          Length = 134

 Score = 36.4 bits (82), Expect = 3.5,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 6/45 (13%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSE 43
          F+I  +A  A  +RL+  A NM+N D+V       +R  +V F  
Sbjct: 7  FDISGSAMAAQSKRLNVSASNMANADSVAGPDGQPYRARQVMFEA 51


>gi|322421738|ref|YP_004200961.1| flagellar basal-body rod protein FlgB [Geobacter sp. M18]
 gi|320128125|gb|ADW15685.1| flagellar basal-body rod protein FlgB [Geobacter sp. M18]
          Length = 139

 Score = 36.4 bits (82), Expect = 3.5,   Method: Composition-based stats.
 Identities = 6/47 (12%), Positives = 19/47 (40%)

Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
          +R + ++ N++N +T G+    + F   + +   +  +         
Sbjct: 23 KRHTMISANLANVETPGYTASDISFEGQLKSALKEGPKSGGVTHPRH 69


>gi|330501135|ref|YP_004378004.1| flagellar basal body rod protein FlgC [Pseudomonas mendocina NK-01]
 gi|328915421|gb|AEB56252.1| flagellar basal body rod protein FlgC [Pseudomonas mendocina NK-01]
          Length = 142

 Score = 36.4 bits (82), Expect = 3.5,   Method: Composition-based stats.
 Identities = 6/42 (14%), Positives = 20/42 (47%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           G++  ++ + + EM  M+  T+ F +   +++  +      +
Sbjct: 96  GYVFYADIDQIEEMTDMMSATRSFETSVEVLNRLKSMQQGLL 137


>gi|73999587|ref|XP_544177.2| PREDICTED: similar to swan [Canis familiaris]
          Length = 814

 Score = 36.4 bits (82), Expect = 3.5,   Method: Composition-based stats.
 Identities = 16/129 (12%), Positives = 31/129 (24%)

Query: 34  FRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE 93
           F+  +  F ++  ++  D            E   +          E DF    +  F   
Sbjct: 540 FKQTQADFRQLDRSLPEDFRHSPEDFRRSPEDFRRPREEHFRRPLEEDFRRPWEEGFRYP 599

Query: 94  SPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK 153
                   R+  ++   +       G  P       P  I           +   +  G+
Sbjct: 600 REEDFRYPREEDWRRPPEEDFRRTLGGRPRSISGGRPRSISGGRPRSTSAGRPRSTSAGR 659

Query: 154 VIATMGLYS 162
              T G   
Sbjct: 660 PRNTSGGRR 668


>gi|56551510|ref|YP_162349.1| flagellar basal-body rod protein FlgB [Zymomonas mobilis subsp.
          mobilis ZM4]
 gi|241761154|ref|ZP_04759243.1| flagellar basal-body rod protein FlgB [Zymomonas mobilis subsp.
          mobilis ATCC 10988]
 gi|260752883|ref|YP_003225776.1| flagellar basal-body rod protein FlgB [Zymomonas mobilis subsp.
          mobilis NCIMB 11163]
 gi|4378861|gb|AAD19729.1| flagellar basal-body rod protein [Zymomonas mobilis subsp.
          mobilis ZM4]
 gi|56543084|gb|AAV89238.1| flagellar basal-body rod protein FlgB [Zymomonas mobilis subsp.
          mobilis ZM4]
 gi|241374773|gb|EER64234.1| flagellar basal-body rod protein FlgB [Zymomonas mobilis subsp.
          mobilis ATCC 10988]
 gi|258552246|gb|ACV75192.1| flagellar basal-body rod protein FlgB [Zymomonas mobilis subsp.
          mobilis NCIMB 11163]
          Length = 117

 Score = 36.4 bits (82), Expect = 3.5,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 30/66 (45%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A +   QR++ +A N++N  T  ++   + F++ +G   +  + + +   +    +  + 
Sbjct: 14 ALVLRNQRMAMLASNIANAATPNYKARDIDFNKALGEATSGNETEEAVNDAMGYRVPIDK 73

Query: 71 GSFIST 76
              +T
Sbjct: 74 SIDGNT 79


>gi|189426356|ref|YP_001953533.1| flagellar basal-body rod protein FlgB [Geobacter lovleyi SZ]
 gi|189422615|gb|ACD97013.1| flagellar basal-body rod protein FlgB [Geobacter lovleyi SZ]
          Length = 146

 Score = 36.4 bits (82), Expect = 3.5,   Method: Composition-based stats.
 Identities = 6/63 (9%), Positives = 20/63 (31%)

Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76
          +  + ++ N++N +T G+    ++F + + +       +                     
Sbjct: 23 RNQNLISSNIANAETPGYTPKSLEFEQQLQSAVKKSTTRRGDSQFSGATTHPAHIPLRGG 82

Query: 77 GTE 79
          G  
Sbjct: 83 GER 85


>gi|224825774|ref|ZP_03698878.1| flagellar basal-body rod protein FlgB [Lutiella nitroferrum 2002]
 gi|224601998|gb|EEG08177.1| flagellar basal-body rod protein FlgB [Lutiella nitroferrum 2002]
          Length = 118

 Score = 36.4 bits (82), Expect = 3.7,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 18/42 (42%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
            + +I   A     +R   +A N++N  T G++   V F  
Sbjct: 6  DKALDIHPEALKLRAERTKVLASNIANETTPGYQARDVDFRS 47


>gi|312882662|ref|ZP_07742399.1| flagellar basal body rod protein FlgB [Vibrio caribbenthicus ATCC
          BAA-2122]
 gi|309369623|gb|EFP97138.1| flagellar basal body rod protein FlgB [Vibrio caribbenthicus ATCC
          BAA-2122]
          Length = 132

 Score = 36.4 bits (82), Expect = 3.7,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 20/37 (54%)

Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
          +    ++ N++ ++T G+++  + F   + A  ++ +
Sbjct: 21 RNAELISTNIAQSNTPGYKSKGMDFQRALQAATSEAN 57


>gi|167750733|ref|ZP_02422860.1| hypothetical protein EUBSIR_01711 [Eubacterium siraeum DSM 15702]
 gi|167656412|gb|EDS00542.1| hypothetical protein EUBSIR_01711 [Eubacterium siraeum DSM 15702]
 gi|291532067|emb|CBK97652.1| flagellar basal-body rod protein FlgB [Eubacterium siraeum 70/3]
 gi|291558196|emb|CBL35313.1| flagellar basal-body rod protein FlgB [Eubacterium siraeum
          V10Sc8a]
          Length = 127

 Score = 36.4 bits (82), Expect = 3.7,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 29/78 (37%), Gaps = 2/78 (2%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
              L Q+   +A N++N DT G+    + F  V+          +    + +     E+
Sbjct: 15 GLSVLWQKQQIIAQNIANQDTPGYNCKYLDFYAVLKDRMES--TSVVGGKAKEGSKQVEL 72

Query: 71 GSFISTGTELDFALEGDA 88
           + +   T  +   +G+ 
Sbjct: 73 ATRVYEDTATNTQPDGNN 90


>gi|51894116|ref|YP_076807.1| flagellar hook-associated protein [Symbiobacterium thermophilum IAM
           14863]
 gi|51857805|dbj|BAD41963.1| flagellar hook-associated protein [Symbiobacterium thermophilum IAM
           14863]
          Length = 558

 Score = 36.4 bits (82), Expect = 3.7,   Method: Composition-based stats.
 Identities = 4/38 (10%), Positives = 15/38 (39%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
            +   E+  M    + F ++  ++   ++ +   I  +
Sbjct: 520 VSIDEEIALMTAEQKAFAAVARVLTVLDEMLQTLINAV 557


>gi|167576668|ref|ZP_02369542.1| flagellar hook-associated protein FlgK [Burkholderia thailandensis
           TXDOH]
          Length = 452

 Score = 36.4 bits (82), Expect = 3.8,   Method: Composition-based stats.
 Identities = 23/195 (11%), Positives = 51/195 (26%), Gaps = 1/195 (0%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
                IG++   A  Q L   + NM+N+    +    V  S  +    +     +    S
Sbjct: 1   MNIIYIGMSGIRAASQSLLATSQNMANSANNEYSRRGVLLSTGLTGGVDASG-LLRLNES 59

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121
            K     + G             +        +P       +        G+L +ASG  
Sbjct: 60  YKTQQLWQAGGQYGRYNAAQSYFDQLEALFGGNPVDGKTKANDLGFGKFIGALEAASGNP 119

Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181
               + +  I             +  ++ + + I    + +V+   G  +          
Sbjct: 120 GDSVLRNGVINAANTMTKQFNNMRSVLTNQLRSIEQQRVTTVERVNGLAKTVAELNGKIA 179

Query: 182 PPTPLEDLSGVTVKR 196
                       + +
Sbjct: 180 AGQGSGADVSALMDQ 194


>gi|148558589|ref|YP_001258003.1| flagellar hook-associated protein FlgK [Brucella ovis ATCC 25840]
 gi|148369874|gb|ABQ62746.1| flagellar hook-associated protein FlgK [Brucella ovis ATCC 25840]
          Length = 464

 Score = 36.4 bits (82), Expect = 3.8,   Method: Composition-based stats.
 Identities = 5/43 (11%), Positives = 17/43 (39%), Gaps = 3/43 (6%)

Query: 202 SN---ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           SN    +   EM  ++ L   + + + ++      + + +  +
Sbjct: 422 SNATGVDIDTEMALLLDLEHSYQASSRVLTTVSAMLDDLLNAV 464


>gi|291558291|emb|CBL35408.1| flagellar hook-associated protein FlgK [Eubacterium siraeum
          V10Sc8a]
          Length = 503

 Score = 36.4 bits (82), Expect = 3.9,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 26/84 (30%), Gaps = 1/84 (1%)

Query: 14 ALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSF 73
            ++ L    +N+SN DTVG+   ++          N I                  G  
Sbjct: 1  MAQKALDVTGNNLSNRDTVGYTRQRLDVYSSYM-NMNGIYTTKLARLGLSSQGVFASGVS 59

Query: 74 ISTGTELDFALEGDAWFALESPRG 97
           +    LD     ++ +  E  + 
Sbjct: 60 QTRDDYLDKRYRDNSCYVSEYNQQ 83


>gi|134297191|ref|YP_001120926.1| flagellar hook-associated protein FlgK [Burkholderia vietnamiensis
           G4]
 gi|134140348|gb|ABO56091.1| flagellar hook-associated protein FlgK [Burkholderia vietnamiensis
           G4]
          Length = 655

 Score = 36.4 bits (82), Expect = 3.9,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 12/37 (32%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N   E   ++   Q + +   +I   +      +
Sbjct: 615 SGVNQNEEAANLMQYQQLYQANAKVIQTAQTLFQTVL 651



 Score = 36.0 bits (81), Expect = 4.7,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 21/48 (43%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
           N+G++   A    L+T   N+SN  T G+   +  ++E  G      
Sbjct: 6  MNLGVSGLNAALWGLTTTGQNISNAATPGYSVERPVYAEESGQYTASG 53


>gi|257091582|ref|YP_003165225.1| hypothetical protein CAP2UW1_4649 [Candidatus Accumulibacter
          phosphatis clade IIA str. UW-1]
 gi|257048591|gb|ACV37778.1| hypothetical protein CAP2UW1_4649 [Candidatus Accumulibacter
          phosphatis clade IIA str. UW-1]
          Length = 119

 Score = 36.4 bits (82), Expect = 3.9,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 22/54 (40%), Gaps = 2/54 (3%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
             A  Q+L  +A N++N DT G++ + +  +E    + +          +   
Sbjct: 3  GVRAYRQQL--LASNIANADTPGYKAVDIDINEAARVVTSTAASLSLATTANGH 54


>gi|301645421|ref|ZP_07245362.1| flagellar hook-associated protein FlgK [Escherichia coli MS
          146-1]
 gi|307136864|ref|ZP_07496220.1| flagellar hook-associated protein FlgK [Escherichia coli H736]
 gi|331640719|ref|ZP_08341866.1| flagellar hook-associated protein FlgK [Escherichia coli H736]
 gi|301076305|gb|EFK91111.1| flagellar hook-associated protein FlgK [Escherichia coli MS
          146-1]
 gi|315616821|gb|EFU97438.1| flagellar hook-associated protein FlgK [Escherichia coli 3431]
 gi|331040093|gb|EGI12301.1| flagellar hook-associated protein FlgK [Escherichia coli H736]
          Length = 458

 Score = 36.4 bits (82), Expect = 4.0,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 22/78 (28%), Gaps = 2/78 (2%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
          M    NIG +     +  L+  A N +N    G+     + S + GA     +   + V 
Sbjct: 1  MD-MINIGYSGASTAQVELNVTAQNTANAMITGYTRQVAEISTI-GASGGSPNSAGNGVQ 58

Query: 61 SGKEYLSKEVGSFISTGT 78
                            
Sbjct: 59 VDSIRRVSNQYQVNQVWY 76


>gi|226320912|ref|ZP_03796463.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi
          29805]
 gi|226233684|gb|EEH32414.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi
          29805]
          Length = 358

 Score = 36.4 bits (82), Expect = 4.0,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 19/46 (41%), Gaps = 3/46 (6%)

Query: 1  MQT---SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
          M +      IG  +  A +  ++TV  N+SN    G+   +V    
Sbjct: 1  MDSTFSGIEIGKRSLFAHKDAMNTVGHNLSNATKPGYSRQRVTMKT 46


>gi|83593864|ref|YP_427616.1| hypothetical protein Rru_A2529 [Rhodospirillum rubrum ATCC 11170]
 gi|83576778|gb|ABC23329.1| Protein of unknown function DUF1078 [Rhodospirillum rubrum ATCC
           11170]
          Length = 452

 Score = 36.0 bits (81), Expect = 4.1,   Method: Composition-based stats.
 Identities = 6/36 (16%), Positives = 12/36 (33%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            N   E  +M+   Q F   + +I    +     + 
Sbjct: 414 VNVEEETAKMLVFQQSFQMTSQVITTAREMFNTLMS 449


>gi|114330358|ref|YP_746580.1| flagellar basal-body rod protein FlgB [Nitrosomonas eutropha C91]
 gi|114307372|gb|ABI58615.1| flagellar basal-body rod protein FlgB [Nitrosomonas eutropha C91]
          Length = 136

 Score = 36.0 bits (81), Expect = 4.1,   Method: Composition-based stats.
 Identities = 10/55 (18%), Positives = 24/55 (43%), Gaps = 2/55 (3%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65
             A  Q L  ++ N++N DT  F+     FS+ +  +++    + +   +   +
Sbjct: 17 GLRAARQEL--LSGNIANADTPSFKAKDFDFSKAMQNVQSPRQVQSALATTSSRH 69


>gi|326386928|ref|ZP_08208542.1| flagellar cell-proximal portion protein [Novosphingobium
          nitrogenifigens DSM 19370]
 gi|326208608|gb|EGD59411.1| flagellar cell-proximal portion protein [Novosphingobium
          nitrogenifigens DSM 19370]
          Length = 140

 Score = 36.0 bits (81), Expect = 4.1,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 25/71 (35%), Gaps = 6/71 (8%)

Query: 11 AQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
          A  A   R++T A N++N  TV       +R +K  F+ V+         K+  V     
Sbjct: 18 AMSAQLVRMNTAASNLANAGTVASNAQGAYRPLKAVFATVLDRSTGLASVKVQGVYQSGA 77

Query: 65 YLSKEVGSFIS 75
             +       
Sbjct: 78 TPVRTHNPDHP 88



 Score = 35.2 bits (79), Expect = 8.1,   Method: Composition-based stats.
 Identities = 7/39 (17%), Positives = 19/39 (48%)

Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            S  +   EM +M    +++ ++   +   ++ ML+ +R
Sbjct: 98  SSPVDENAEMVEMTESARQYQNVVEAMQTGKQLMLDTLR 136


>gi|330880535|gb|EGH14684.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv.
           glycinea str. race 4]
          Length = 61

 Score = 36.0 bits (81), Expect = 4.2,   Method: Composition-based stats.
 Identities = 6/40 (15%), Positives = 15/40 (37%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           S  +   E   +I   Q + + + +I   +      I ++
Sbjct: 22  SGVSLDEEAANLIKYQQYYTASSQIIKAAQTIFSTLINSL 61


>gi|254691612|ref|ZP_05154866.1| flagellar hook-associated protein FlgK [Brucella abortus bv. 6 str.
           870]
 gi|256256799|ref|ZP_05462335.1| flagellar hook-associated protein FlgK [Brucella abortus bv. 9 str.
           C68]
 gi|260757243|ref|ZP_05869591.1| flagellar hook-associated protein FlgK [Brucella abortus bv. 6 str.
           870]
 gi|260883047|ref|ZP_05894661.1| FlgK [Brucella abortus bv. 9 str. C68]
 gi|297250152|ref|ZP_06933853.1| flagellar hook-associated protein FlgK [Brucella abortus bv. 5 str.
           B3196]
 gi|260677351|gb|EEX64172.1| flagellar hook-associated protein FlgK [Brucella abortus bv. 6 str.
           870]
 gi|260872575|gb|EEX79644.1| FlgK [Brucella abortus bv. 9 str. C68]
 gi|297174021|gb|EFH33385.1| flagellar hook-associated protein FlgK [Brucella abortus bv. 5 str.
           B3196]
          Length = 484

 Score = 36.0 bits (81), Expect = 4.2,   Method: Composition-based stats.
 Identities = 5/43 (11%), Positives = 17/43 (39%), Gaps = 3/43 (6%)

Query: 202 SN---ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           SN    +   EM  ++ L   + + + ++      + + +  +
Sbjct: 442 SNATGVDIDTEMALLLDLEHSYQASSRVLTTVSAMLDDLLNAV 484


>gi|296274028|ref|YP_003656659.1| flagellar basal-body rod protein FlgB [Arcobacter nitrofigilis
          DSM 7299]
 gi|296098202|gb|ADG94152.1| flagellar basal-body rod protein FlgB [Arcobacter nitrofigilis
          DSM 7299]
          Length = 135

 Score = 36.0 bits (81), Expect = 4.2,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 16/36 (44%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
          R   ++ N++N +T  ++T  + F   +       D
Sbjct: 20 RQKVISSNIANINTPDYKTKDLSFESQLQEKNRQKD 55


>gi|28900119|ref|NP_799774.1| flagellar basal body rod protein FlgB [Vibrio parahaemolyticus RIMD
           2210633]
 gi|153837054|ref|ZP_01989721.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus
           AQ3810]
 gi|260365769|ref|ZP_05778265.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus
           K5030]
 gi|260880691|ref|ZP_05893046.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus
           AN-5034]
 gi|260897703|ref|ZP_05906199.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus
           Peru-466]
 gi|260899386|ref|ZP_05907781.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus
           AQ4037]
 gi|1272365|gb|AAA97473.1| LfgB [Vibrio parahaemolyticus]
 gi|28808402|dbj|BAC61607.1| LfgB [Vibrio parahaemolyticus RIMD 2210633]
 gi|149749642|gb|EDM60387.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus
           AQ3810]
 gi|308086275|gb|EFO35970.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus
           Peru-466]
 gi|308091690|gb|EFO41385.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus
           AN-5034]
 gi|308109180|gb|EFO46720.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus
           AQ4037]
 gi|308115060|gb|EFO52600.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus
           K5030]
 gi|328470098|gb|EGF41009.1| flagellar basal body rod protein FlgB [Vibrio parahaemolyticus
           10329]
          Length = 120

 Score = 36.0 bits (81), Expect = 4.2,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 30/85 (35%), Gaps = 1/85 (1%)

Query: 17  QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76
           QR   +A N++N DT G+    + F+ V+  +  +           +   S    +    
Sbjct: 21  QRTKVLASNLANVDTPGYLAKDLSFTTVMNQMSTNGVSNSVPKLQVQAQYSVPYQNSK-D 79

Query: 77  GTELDFALEGDAWFALESPRGIILT 101
           G  ++  +E   +          LT
Sbjct: 80  GNTVELGVEQAKFTQNNMDFQTSLT 104


>gi|134095100|ref|YP_001100175.1| basal-body rod protein [Herminiimonas arsenicoxydans]
 gi|133739003|emb|CAL62051.1| Flagellar basal-body rod protein FlgB (Putative proximal rod
          protein) [Herminiimonas arsenicoxydans]
          Length = 139

 Score = 36.0 bits (81), Expect = 4.3,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 30/82 (36%), Gaps = 3/82 (3%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66
            L+   A  Q+L  +A N++N DT  F+   + F++ +           +  A+  +  
Sbjct: 14 TALS-LRAQRQQL--LASNIANADTPNFKARDIDFNKALQGAIAKSAGGAAAPAALVKTT 70

Query: 67 SKEVGSFISTGTELDFALEGDA 88
          +  + S           L  + 
Sbjct: 71 TAHLSSNTHATIGGAPLLYSNT 92


>gi|224534099|ref|ZP_03674682.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi
          CA-11.2a]
 gi|224512798|gb|EEF83166.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi
          CA-11.2a]
          Length = 388

 Score = 36.0 bits (81), Expect = 4.4,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 19/46 (41%), Gaps = 3/46 (6%)

Query: 1  MQT---SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
          M +      IG  +  A +  ++TV  N+SN    G+   +V    
Sbjct: 1  MDSTFSGIEIGKRSLFAHKDAMNTVGHNLSNATKPGYSRQRVTMKT 46


>gi|17988504|ref|NP_541137.1| flagellar hook-associated protein FlgK [Brucella melitensis bv. 1
           str. 16M]
 gi|225686884|ref|YP_002734856.1| flagellar hook-associated protein FlgK [Brucella melitensis ATCC
           23457]
 gi|256042865|ref|ZP_05445811.1| flagellar hook-associated protein FlgK [Brucella melitensis bv. 1
           str. Rev.1]
 gi|256261979|ref|ZP_05464511.1| flagellar hook-associated protein [Brucella melitensis bv. 2 str.
           63/9]
 gi|260564102|ref|ZP_05834587.1| flagellar hook-associated protein [Brucella melitensis bv. 1 str.
           16M]
 gi|265989300|ref|ZP_06101857.1| FlgK [Brucella melitensis bv. 1 str. Rev.1]
 gi|17984296|gb|AAL53401.1| flagellar hook-associated protein 1 [Brucella melitensis bv. 1 str.
           16M]
 gi|225642989|gb|ACO02902.1| flagellar hook-associated protein FlgK [Brucella melitensis ATCC
           23457]
 gi|260151745|gb|EEW86838.1| flagellar hook-associated protein [Brucella melitensis bv. 1 str.
           16M]
 gi|262999969|gb|EEZ12659.1| FlgK [Brucella melitensis bv. 1 str. Rev.1]
 gi|263091463|gb|EEZ15999.1| flagellar hook-associated protein [Brucella melitensis bv. 2 str.
           63/9]
 gi|326411302|gb|ADZ68366.1| flagellar hook-associated protein FlgK [Brucella melitensis M28]
 gi|326554591|gb|ADZ89230.1| flagellar hook-associated protein FlgK [Brucella melitensis M5-90]
          Length = 484

 Score = 36.0 bits (81), Expect = 4.4,   Method: Composition-based stats.
 Identities = 5/43 (11%), Positives = 17/43 (39%), Gaps = 3/43 (6%)

Query: 202 SN---ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           SN    +   EM  ++ L   + + + ++      + + +  +
Sbjct: 442 SNATGVDIDTEMALLLDLEHSYQASSRVLTTVSAMLDDLLNAV 484


>gi|325524325|gb|EGD02427.1| flagellar hook-associated protein FlgK [Burkholderia sp. TJI49]
          Length = 599

 Score = 36.0 bits (81), Expect = 4.4,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 11/37 (29%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           S  N   E   ++   Q + +   +I          +
Sbjct: 559 SGVNQNEEAANLMQYQQLYQANAKVIQTAATLFQTVL 595


>gi|256370953|ref|YP_003108777.1| protein of unknown function DUF1078 domain protein
          [Acidimicrobium ferrooxidans DSM 10331]
 gi|256007537|gb|ACU53104.1| protein of unknown function DUF1078 domain protein
          [Acidimicrobium ferrooxidans DSM 10331]
          Length = 144

 Score = 36.0 bits (81), Expect = 4.4,   Method: Composition-based stats.
 Identities = 5/27 (18%), Positives = 13/27 (48%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTD 30
          + ++        +  L T+A N++N +
Sbjct: 6  AIDVAATGVTTEQTWLDTIASNVANVN 32


>gi|254695092|ref|ZP_05156920.1| flagellar hook-associated protein FlgK [Brucella abortus bv. 3 str.
           Tulya]
 gi|261215443|ref|ZP_05929724.1| flagellar hook-associated protein FlgK [Brucella abortus bv. 3 str.
           Tulya]
 gi|260917050|gb|EEX83911.1| flagellar hook-associated protein FlgK [Brucella abortus bv. 3 str.
           Tulya]
          Length = 484

 Score = 36.0 bits (81), Expect = 4.5,   Method: Composition-based stats.
 Identities = 5/43 (11%), Positives = 17/43 (39%), Gaps = 3/43 (6%)

Query: 202 SN---ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           SN    +   EM  ++ L   + + + ++      + + +  +
Sbjct: 442 SNATGVDIDTEMALLLDLEHSYQASSRVLTTVSAMLDDLLNAV 484


>gi|163845456|ref|YP_001623111.1| flagellar hook-associated protein FlgK [Brucella suis ATCC 23445]
 gi|163676179|gb|ABY40289.1| flagellar hook-associated protein FlgK [Brucella suis ATCC 23445]
          Length = 484

 Score = 36.0 bits (81), Expect = 4.5,   Method: Composition-based stats.
 Identities = 5/43 (11%), Positives = 17/43 (39%), Gaps = 3/43 (6%)

Query: 202 SN---ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           SN    +   EM  ++ L   + + + ++      + + +  +
Sbjct: 442 SNATGVDIDTEMALLLDLEHSYQASSRVLTTVSAMLDDLLNAV 484


>gi|2689167|emb|CAA06002.1| hook associated flagellar protein 1 [Borrelia burgdorferi]
          Length = 253

 Score = 36.0 bits (81), Expect = 4.5,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 19/46 (41%), Gaps = 3/46 (6%)

Query: 1  MQT---SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
          M +      IG  +  A +  ++TV  N+SN    G+   +V    
Sbjct: 1  MDSTFSGIEIGKRSLFAHKDAMNTVGHNLSNATKPGYSRQRVTMKT 46


>gi|325291942|ref|YP_004277806.1| flagellar basal body rod protein FlgB [Agrobacterium sp. H13-3]
 gi|325059795|gb|ADY63486.1| flagellar basal body rod protein FlgB [Agrobacterium sp. H13-3]
          Length = 130

 Score = 36.0 bits (81), Expect = 4.5,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 17/40 (42%), Gaps = 1/40 (2%)

Query: 15 LEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIKNDID 53
          L  R   VA N++N +T  F    V  F  V+ A    + 
Sbjct: 17 LSVRQEVVATNIANANTPKFHAKDVSPFEAVMQATSQQVG 56


>gi|294679036|ref|YP_003579651.1| flagellar basal-body rod protein; FlgB [Rhodobacter capsulatus SB
          1003]
 gi|294477856|gb|ADE87244.1| flagellar basal-body rod protein; FlgB [Rhodobacter capsulatus SB
          1003]
          Length = 128

 Score = 36.0 bits (81), Expect = 4.5,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 21/53 (39%), Gaps = 3/53 (5%)

Query: 9  LAAQLALEQRLS--TVADNMSNTDTVGFR-TIKVKFSEVVGAIKNDIDQKISF 58
          ++  +A    L    VA N++N DT G+R    V F++          +    
Sbjct: 10 MSQAMARHAALREGVVATNVANADTPGYRAKDVVSFADSYRTEHAQPMRATRP 62


>gi|312887246|ref|ZP_07746850.1| TonB-dependent receptor [Mucilaginibacter paludis DSM 18603]
 gi|311300558|gb|EFQ77623.1| TonB-dependent receptor [Mucilaginibacter paludis DSM 18603]
          Length = 1153

 Score = 36.0 bits (81), Expect = 4.6,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 59/191 (30%), Gaps = 6/191 (3%)

Query: 11  AQLALEQRLSTVADNMSNTDTVGFRTI--KVKFSEVVGAIKNDIDQKISFVASGKEYLSK 68
            QL+  ++ +T+A+N+    T+ ++       F+ ++GA +     + +          K
Sbjct: 616 GQLSSSRKTTTIANNLLYQGTINYKKDFGNNSFTALLGATQETNKDETTDQGQTGFPNDK 675

Query: 69  EVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMAS 128
                ++ GT  ++    ++ +A          R             S       +   +
Sbjct: 676 TYIFDVTRGTTTNY----NSIYATNKAIISYFGRVQYSYKNKYLFSASLRTDGSSIFGPN 731

Query: 129 VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED 188
               +        V  + +  +K   + T  L +     G  R   S    N+       
Sbjct: 732 NRWGLFPSVSAGWVLSEEDFLKKIDWMGTTKLRASWGRAGNDRIVASSYVSNMVALNYPT 791

Query: 189 LSGVTVKRGFL 199
                +  GF+
Sbjct: 792 GDAQAITNGFV 802


>gi|148252489|ref|YP_001237074.1| putative flagellar basal-body rod protein (flgC) [Bradyrhizobium
           sp. BTAi1]
 gi|146404662|gb|ABQ33168.1| putative flagellar basal-body rod protein (flgC) [Bradyrhizobium
           sp. BTAi1]
          Length = 125

 Score = 36.0 bits (81), Expect = 4.6,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 14/37 (37%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233
           G +   N +   EM   +     F +   ++  +++ 
Sbjct: 80  GLVAAPNVDLAQEMISQLVAKYSFAANARVLKASDEM 116


>gi|23500853|ref|NP_700293.1| flagellar hook-associated protein FlgK [Brucella suis 1330]
 gi|161621181|ref|YP_001595067.1| flagellar hook-associated protein FlgK [Brucella canis ATCC 23365]
 gi|254699261|ref|ZP_05161089.1| flagellar hook-associated protein FlgK [Brucella suis bv. 5 str.
           513]
 gi|254702382|ref|ZP_05164210.1| flagellar hook-associated protein FlgK [Brucella suis bv. 3 str.
           686]
 gi|254711817|ref|ZP_05173628.1| flagellar hook-associated protein FlgK [Brucella ceti M644/93/1]
 gi|254714886|ref|ZP_05176697.1| flagellar hook-associated protein FlgK [Brucella ceti M13/05/1]
 gi|256015897|ref|YP_003105906.1| flagellar hook-associated protein [Brucella microti CCM 4915]
 gi|256059805|ref|ZP_05450000.1| flagellar hook-associated protein FlgK [Brucella neotomae 5K33]
 gi|260568715|ref|ZP_05839184.1| flagellar hook-associated protein [Brucella suis bv. 4 str. 40]
 gi|261216576|ref|ZP_05930857.1| flagellar hook-associated protein FlgK [Brucella ceti M13/05/1]
 gi|261319446|ref|ZP_05958643.1| flagellar hook-associated protein FlgK [Brucella ceti M644/93/1]
 gi|261323785|ref|ZP_05962982.1| FlgK [Brucella neotomae 5K33]
 gi|261749701|ref|ZP_05993410.1| flagellar hook-associated protein [Brucella suis bv. 5 str. 513]
 gi|261752945|ref|ZP_05996654.1| flagellar hook-associated protein [Brucella suis bv. 3 str. 686]
 gi|294852967|ref|ZP_06793639.1| flagellar hook-associated protein FlgK [Brucella sp. NVSL 07-0026]
 gi|23464517|gb|AAN34298.1| flagellar hook-associated protein FlgK, putative [Brucella suis
           1330]
 gi|161337992|gb|ABX64296.1| flagellar hook-associated protein FlgK [Brucella canis ATCC 23365]
 gi|255998557|gb|ACU50244.1| flagellar hook-associated protein [Brucella microti CCM 4915]
 gi|260155380|gb|EEW90461.1| flagellar hook-associated protein [Brucella suis bv. 4 str. 40]
 gi|260921665|gb|EEX88233.1| flagellar hook-associated protein FlgK [Brucella ceti M13/05/1]
 gi|261292136|gb|EEX95632.1| flagellar hook-associated protein FlgK [Brucella ceti M644/93/1]
 gi|261299765|gb|EEY03262.1| FlgK [Brucella neotomae 5K33]
 gi|261739454|gb|EEY27380.1| flagellar hook-associated protein [Brucella suis bv. 5 str. 513]
 gi|261742698|gb|EEY30624.1| flagellar hook-associated protein [Brucella suis bv. 3 str. 686]
 gi|294818622|gb|EFG35622.1| flagellar hook-associated protein FlgK [Brucella sp. NVSL 07-0026]
          Length = 484

 Score = 36.0 bits (81), Expect = 4.6,   Method: Composition-based stats.
 Identities = 5/43 (11%), Positives = 17/43 (39%), Gaps = 3/43 (6%)

Query: 202 SN---ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           SN    +   EM  ++ L   + + + ++      + + +  +
Sbjct: 442 SNATGVDIDTEMALLLDLEHSYQASSRVLTTVSAMLDDLLNAV 484


>gi|319403958|emb|CBI77546.1| Flagellar basal-body rod protein flgB [Bartonella rochalimae ATCC
          BAA-1498]
          Length = 128

 Score = 36.0 bits (81), Expect = 4.6,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 15 LEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGA 47
          L  R   +A N++N +T G++   V+ F+ V+  
Sbjct: 17 LSVRQKAIASNVANANTPGYKARDVEDFTAVLQN 50


>gi|319405398|emb|CBI79017.1| Flagellar basal-body rod protein flgB [Bartonella sp. AR 15-3]
          Length = 128

 Score = 36.0 bits (81), Expect = 4.7,   Method: Composition-based stats.
 Identities = 8/26 (30%), Positives = 15/26 (57%)

Query: 15 LEQRLSTVADNMSNTDTVGFRTIKVK 40
          L  R   +A N++N +T G++   V+
Sbjct: 17 LSVRQKAIASNVANANTPGYKARDVE 42


>gi|306841277|ref|ZP_07473988.1| flagellar hook-associated protein FlgK [Brucella sp. BO2]
 gi|306288679|gb|EFM60010.1| flagellar hook-associated protein FlgK [Brucella sp. BO2]
          Length = 484

 Score = 36.0 bits (81), Expect = 4.7,   Method: Composition-based stats.
 Identities = 5/43 (11%), Positives = 17/43 (39%), Gaps = 3/43 (6%)

Query: 202 SN---ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           SN    +   EM  ++ L   + + + ++      + + +  +
Sbjct: 442 SNATGVDIDTEMALLLDLEHSYQASSRVLTTVSAMLDDLLNAV 484


>gi|89069823|ref|ZP_01157158.1| flagellar basal-body rod protein; FlgB [Oceanicola granulosus
          HTCC2516]
 gi|89044624|gb|EAR50740.1| flagellar basal-body rod protein; FlgB [Oceanicola granulosus
          HTCC2516]
          Length = 122

 Score = 36.0 bits (81), Expect = 4.7,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 17/44 (38%), Gaps = 1/44 (2%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRT-IKVKFSEVVGA 47
               A       R   VA N++N DT G+R      F EV G 
Sbjct: 8  MQTSAAMARHASARQVLVARNIANADTPGYRAQSLPPFREVAGT 51


>gi|306845418|ref|ZP_07477992.1| flagellar hook-associated protein FlgK [Brucella sp. BO1]
 gi|306274161|gb|EFM55977.1| flagellar hook-associated protein FlgK [Brucella sp. BO1]
          Length = 484

 Score = 36.0 bits (81), Expect = 4.7,   Method: Composition-based stats.
 Identities = 5/43 (11%), Positives = 17/43 (39%), Gaps = 3/43 (6%)

Query: 202 SN---ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           SN    +   EM  ++ L   + + + ++      + + +  +
Sbjct: 442 SNATGVDIDTEMALLLDLEHSYQASSRVLTTVSAMLDDLLNAV 484


>gi|254458790|ref|ZP_05072214.1| flagellar basal-body rod protein FlgB [Campylobacterales bacterium
           GD 1]
 gi|207084556|gb|EDZ61844.1| flagellar basal-body rod protein FlgB [Campylobacterales bacterium
           GD 1]
          Length = 143

 Score = 36.0 bits (81), Expect = 4.8,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 30/84 (35%)

Query: 17  QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76
            R   ++ N++N DT  +R   + F++ + A K DI  + S   +  +     +      
Sbjct: 21  MRQDMISSNIANADTPFYRPRDISFADALAAKKADILNEGSDKLALAQTNGAHIPLHNEK 80

Query: 77  GTELDFALEGDAWFALESPRGIIL 100
           G         D   A      + L
Sbjct: 81  GNYKPTTFYRDGHMARNDGNSVDL 104


>gi|119715008|ref|YP_921973.1| flagellar basal-body rod protein [Nocardioides sp. JS614]
 gi|119535669|gb|ABL80286.1| flagellar basal-body rod protein [Nocardioides sp. JS614]
          Length = 130

 Score = 36.0 bits (81), Expect = 4.8,   Method: Composition-based stats.
 Identities = 8/28 (28%), Positives = 15/28 (53%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTV 32
            I  ++    +  L T+A N++N +TV
Sbjct: 7  LTIAGSSMGVHQTWLDTLASNIANVNTV 34



 Score = 35.2 bits (79), Expect = 8.1,   Method: Composition-based stats.
 Identities = 10/73 (13%), Positives = 30/73 (41%), Gaps = 6/73 (8%)

Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226
            G  + +  G   + P  P+ D        G++   + +   +M Q++   + F +   +
Sbjct: 60  AGLAQSDPQGRLVSDPGNPMADAD------GYVRAPDMDMSTQMTQLVMAQRGFQASVQV 113

Query: 227 IDENEKSMLEAIR 239
             + +++   A++
Sbjct: 114 TKQAQETYTAALQ 126


>gi|77457733|ref|YP_347238.1| flagellar hook-associated protein FlgK [Pseudomonas fluorescens
          Pf0-1]
 gi|77381736|gb|ABA73249.1| putative flagellar hook-associated protein [Pseudomonas
          fluorescens Pf0-1]
          Length = 681

 Score = 36.0 bits (81), Expect = 4.8,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 19/39 (48%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40
           +  NIG++   A    L+   +N++N DT G+   +  
Sbjct: 1  MSLLNIGMSGLAASSSSLAVTGNNIANVDTAGYSRQQTV 39


>gi|315180489|gb|ADT87403.1| flagellar basal body rod protein [Vibrio furnissii NCTC 11218]
          Length = 104

 Score = 36.0 bits (81), Expect = 4.9,   Method: Composition-based stats.
 Identities = 14/96 (14%), Positives = 32/96 (33%)

Query: 18  RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTG 77
           R S +A N++N DT  ++   V F+ V+  +  +         S      +      +  
Sbjct: 9   RTSVLASNIANADTPNYKAKDVSFNVVMTGLMKETSAIGIQTESLYRIPVQRSRDGNTVE 68

Query: 78  TELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113
            + + A         +     + ++    K   +G 
Sbjct: 69  LQSEQARFAQNNMEYQQSLQFLKSKISGLKRAIEGQ 104


>gi|254487293|ref|ZP_05100498.1| flagellar basal-body rod protein; FlgB [Roseobacter sp. GAI101]
 gi|214044162|gb|EEB84800.1| flagellar basal-body rod protein; FlgB [Roseobacter sp. GAI101]
          Length = 115

 Score = 36.0 bits (81), Expect = 4.9,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 18/37 (48%), Gaps = 1/37 (2%)

Query: 17 QRLSTVADNMSNTDTVGF-RTIKVKFSEVVGAIKNDI 52
          QR +  + N++N+DT G+       F  +  + ++  
Sbjct: 7  QRQAIASQNVANSDTPGYVAKDIAAFETLYQSSRDGT 43


>gi|86149083|ref|ZP_01067315.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni
          subsp. jejuni CF93-6]
 gi|88596882|ref|ZP_01100118.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni
          subsp. jejuni 84-25]
 gi|218562180|ref|YP_002343959.1| flagellar basal body rod protein FlgB [Campylobacter jejuni
          subsp. jejuni NCTC 11168]
 gi|85840441|gb|EAQ57698.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni
          subsp. jejuni CF93-6]
 gi|88190571|gb|EAQ94544.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni
          subsp. jejuni 84-25]
 gi|112359886|emb|CAL34674.1| flagellar basal-body rod protein [Campylobacter jejuni subsp.
          jejuni NCTC 11168]
 gi|315927026|gb|EFV06381.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni
          subsp. jejuni DFVF1099]
 gi|315928560|gb|EFV07857.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni
          subsp. jejuni 305]
          Length = 143

 Score = 36.0 bits (81), Expect = 4.9,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 20/45 (44%), Gaps = 1/45 (2%)

Query: 9  LAAQLALEQ-RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          +   LA    R   +  N++N DT  ++   ++F   +    N+I
Sbjct: 11 VTGALAGRNLRNQLINANLANVDTPFYKARDIEFETALVNRANEI 55


>gi|149203130|ref|ZP_01880101.1| flagellar basal-body rod protein; FlgB [Roseovarius sp. TM1035]
 gi|149143676|gb|EDM31712.1| flagellar basal-body rod protein; FlgB [Roseovarius sp. TM1035]
          Length = 129

 Score = 36.0 bits (81), Expect = 4.9,   Method: Composition-based stats.
 Identities = 12/70 (17%), Positives = 24/70 (34%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTG 77
          R + V+ NM+N DT G+    +    VV A  +      +            +   ++  
Sbjct: 21 RQALVSQNMANADTPGYAARDIADFAVVYASDDGGQMPRATRGGHMLGHETRLDFAVAKD 80

Query: 78 TELDFALEGD 87
           +      G+
Sbjct: 81 RDAVADPNGN 90


>gi|89072318|ref|ZP_01158897.1| LfgB [Photobacterium sp. SKA34]
 gi|89051850|gb|EAR57302.1| LfgB [Photobacterium sp. SKA34]
          Length = 120

 Score = 36.0 bits (81), Expect = 4.9,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 31/85 (36%), Gaps = 1/85 (1%)

Query: 17  QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76
           QR   +A N++N DT G+    ++F  +   I     QK        +  +    +    
Sbjct: 21  QRAKVLASNLANVDTPGYLAKDIRFDAIASQIGVGKVQKAPTQLVVSDGYAVPYQNSK-D 79

Query: 77  GTELDFALEGDAWFALESPRGIILT 101
           G  ++ ++E   +          LT
Sbjct: 80  GNTVELSVEQAKFTKNNMDFQSSLT 104


>gi|296282281|ref|ZP_06860279.1| flagellar basal-body rod protein FlgC [Citromicrobium bathyomarinum
           JL354]
          Length = 130

 Score = 36.0 bits (81), Expect = 5.0,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 21/36 (58%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +   EM +M+  +++++++   +   ++ MLE +R
Sbjct: 93  VDENAEMIEMLEASRQYSNMVEAMSTAKQLMLETMR 128


>gi|146278634|ref|YP_001168793.1| flagellar basal body rod protein FlgB [Rhodobacter sphaeroides
          ATCC 17025]
 gi|145556875|gb|ABP71488.1| Flagellar basal body protein-like protein [Rhodobacter
          sphaeroides ATCC 17025]
          Length = 127

 Score = 36.0 bits (81), Expect = 5.0,   Method: Composition-based stats.
 Identities = 9/28 (32%), Positives = 14/28 (50%), Gaps = 1/28 (3%)

Query: 18 RLSTVADNMSNTDTVGFR-TIKVKFSEV 44
          R   +A N++N+DT G+R      F   
Sbjct: 21 RTDVIARNVANSDTPGYRARDLPDFESY 48


>gi|20086976|gb|AAM10736.1| flagella-associated protein K [Leptospira interrogans serovar
          lai]
          Length = 543

 Score = 36.0 bits (81), Expect = 5.0,   Method: Composition-based stats.
 Identities = 16/89 (17%), Positives = 29/89 (32%), Gaps = 9/89 (10%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV---------VGAIKNDID 53
          +   IG     A +Q L T   N+SN D   +   +V  + +            +   I 
Sbjct: 6  SGLEIGKRGLTAHQQALQTTGHNISNADNKHYARQRVTMTAMDPLYDPSLNRANLPGQIG 65

Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDF 82
          Q +   +  +   +      I T    D+
Sbjct: 66 QGVEIASIERIRDNFIDDRIIETSGNKDY 94


>gi|283955950|ref|ZP_06373440.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni
          subsp. jejuni 1336]
 gi|283792610|gb|EFC31389.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni
          subsp. jejuni 1336]
          Length = 143

 Score = 36.0 bits (81), Expect = 5.1,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 20/45 (44%), Gaps = 1/45 (2%)

Query: 9  LAAQLALEQ-RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          +   LA    R   +  N++N DT  ++   ++F   +    N+I
Sbjct: 11 VTGALAGRNLRNQLINANLANVDTPFYKARDIEFETALVNRANEI 55


>gi|86151611|ref|ZP_01069825.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni
          subsp. jejuni 260.94]
 gi|86153541|ref|ZP_01071745.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni
          subsp. jejuni HB93-13]
 gi|121613256|ref|YP_001000228.1| flagellar basal body rod protein FlgB [Campylobacter jejuni
          subsp. jejuni 81-176]
 gi|157414809|ref|YP_001482065.1| flagellar basal body rod protein FlgB [Campylobacter jejuni
          subsp. jejuni 81116]
 gi|167005183|ref|ZP_02270941.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni
          subsp. jejuni 81-176]
 gi|315124051|ref|YP_004066055.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni
          subsp. jejuni ICDCCJ07001]
 gi|85841240|gb|EAQ58488.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni
          subsp. jejuni 260.94]
 gi|85843267|gb|EAQ60478.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni
          subsp. jejuni HB93-13]
 gi|87250467|gb|EAQ73425.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni
          subsp. jejuni 81-176]
 gi|157385773|gb|ABV52088.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni
          subsp. jejuni 81116]
 gi|307747447|gb|ADN90717.1| Flagellar basal-body rod protein FlgB [Campylobacter jejuni
          subsp. jejuni M1]
 gi|315017773|gb|ADT65866.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni
          subsp. jejuni ICDCCJ07001]
 gi|315931722|gb|EFV10677.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni
          subsp. jejuni 327]
          Length = 143

 Score = 36.0 bits (81), Expect = 5.1,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 20/45 (44%), Gaps = 1/45 (2%)

Query: 9  LAAQLALEQ-RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          +   LA    R   +  N++N DT  ++   ++F   +    N+I
Sbjct: 11 VTGALAGRNLRNQLINANLANVDTPFYKARDIEFETALVNRANEI 55


>gi|312115279|ref|YP_004012875.1| flagellar hook-associated protein FlgK [Rhodomicrobium vannielii
           ATCC 17100]
 gi|311220408|gb|ADP71776.1| flagellar hook-associated protein FlgK [Rhodomicrobium vannielii
           ATCC 17100]
          Length = 489

 Score = 36.0 bits (81), Expect = 5.1,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 19/43 (44%), Gaps = 3/43 (6%)

Query: 202 SN---ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           SN    N   E+ +M+ L Q + +   L+   ++   + +  I
Sbjct: 447 SNATGVNLDSELSKMLALEQSYAASAKLVSAVDQMFSDLLNAI 489


>gi|242309756|ref|ZP_04808911.1| flagellar basal-body rod protein flgb proximal rod protein
          [Helicobacter pullorum MIT 98-5489]
 gi|239523757|gb|EEQ63623.1| flagellar basal-body rod protein flgb proximal rod protein
          [Helicobacter pullorum MIT 98-5489]
          Length = 144

 Score = 36.0 bits (81), Expect = 5.1,   Method: Composition-based stats.
 Identities = 6/37 (16%), Positives = 18/37 (48%)

Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
            R   ++ N++N  T  +R   + F +++    +++
Sbjct: 21 SLRRDMISSNIANVSTPMYRPKDINFEQMMAKKADEV 57


>gi|39933177|ref|NP_945453.1| putative flagellar basal-body rod protein flgC [Rhodopseudomonas
          palustris CGA009]
 gi|192288534|ref|YP_001989139.1| hypothetical protein Rpal_0101 [Rhodopseudomonas palustris TIE-1]
 gi|39652802|emb|CAE25541.1| putative flagellar basal-body rod protein flgC [Rhodopseudomonas
          palustris CGA009]
 gi|192282283|gb|ACE98663.1| protein of unknown function DUF1078 domain protein
          [Rhodopseudomonas palustris TIE-1]
          Length = 136

 Score = 36.0 bits (81), Expect = 5.1,   Method: Composition-based stats.
 Identities = 9/33 (27%), Positives = 16/33 (48%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG 33
          M    +I ++   A  +RL   A N++N  + G
Sbjct: 1  MSAIASIAVSGLNAATRRLEVSASNIANQRSTG 33


>gi|319898634|ref|YP_004158727.1| flagellar basal-body rod protein flgB [Bartonella clarridgeiae
          73]
 gi|319402598|emb|CBI76143.1| Flagellar basal-body rod protein flgB [Bartonella clarridgeiae
          73]
          Length = 128

 Score = 36.0 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 15 LEQRLSTVADNMSNTDTVGFRTIKV-KFSEVVGA 47
          L  R   +A N++N +T G++   V  F+ V+  
Sbjct: 17 LSVRQKAIASNVANANTPGYKARDVDDFTAVLQN 50


>gi|114706627|ref|ZP_01439528.1| flagellar hook-associated protein K [Fulvimarina pelagi HTCC2506]
 gi|114538019|gb|EAU41142.1| flagellar hook-associated protein K [Fulvimarina pelagi HTCC2506]
          Length = 469

 Score = 36.0 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 17/40 (42%), Gaps = 3/40 (7%)

Query: 202 SN---ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           SN    N   EM  ++ L + + + T L+    + +   +
Sbjct: 427 SNKTGINLDDEMSHLLELERTYQASTKLVQTVGELLDRLL 466


>gi|283954184|ref|ZP_06371709.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni
          subsp. jejuni 414]
 gi|283794463|gb|EFC33207.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni
          subsp. jejuni 414]
          Length = 143

 Score = 35.6 bits (80), Expect = 5.3,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 20/45 (44%), Gaps = 1/45 (2%)

Query: 9  LAAQLALEQ-RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          +   LA    R   +  N++N DT  ++   ++F   +    N+I
Sbjct: 11 VTGALAGRNLRNQLINANLANVDTPFYKARDIEFETALVNRANEI 55


>gi|91975157|ref|YP_567816.1| putative flagellar basal-body rod protein flgC [Rhodopseudomonas
          palustris BisB5]
 gi|91681613|gb|ABE37915.1| putative flagellar basal-body rod protein flgC [Rhodopseudomonas
          palustris BisB5]
          Length = 136

 Score = 35.6 bits (80), Expect = 5.3,   Method: Composition-based stats.
 Identities = 9/33 (27%), Positives = 17/33 (51%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG 33
          M +  +I ++   A  +RL   A N++N  + G
Sbjct: 1  MTSIASIAVSGMNAATRRLEVSASNVANQQSTG 33


>gi|260466622|ref|ZP_05812810.1| flagellar basal body rod protein [Mesorhizobium opportunistum
          WSM2075]
 gi|259029628|gb|EEW30916.1| flagellar basal body rod protein [Mesorhizobium opportunistum
          WSM2075]
          Length = 126

 Score = 35.6 bits (80), Expect = 5.4,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIKNDIDQKISF 58
          R S +A N++N +T G+    V+ F +V+      +    + 
Sbjct: 20 RQSAIAGNIANANTPGYTANDVEPFEKVLDRAAVSLQATQAG 61


>gi|254720774|ref|ZP_05182585.1| flagellar hook-associated protein FlgK [Brucella sp. 83/13]
 gi|265985832|ref|ZP_06098567.1| flagellar hook-associated protein FlgK [Brucella sp. 83/13]
 gi|306840135|ref|ZP_07472920.1| flagellar hook-associated protein FlgK [Brucella sp. NF 2653]
 gi|264664424|gb|EEZ34685.1| flagellar hook-associated protein FlgK [Brucella sp. 83/13]
 gi|306404780|gb|EFM61074.1| flagellar hook-associated protein FlgK [Brucella sp. NF 2653]
          Length = 484

 Score = 35.6 bits (80), Expect = 5.5,   Method: Composition-based stats.
 Identities = 5/43 (11%), Positives = 17/43 (39%), Gaps = 3/43 (6%)

Query: 202 SN---ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           SN    +   EM  ++ L   + + + ++      + + +  +
Sbjct: 442 SNATGVDIDTEMALLLDLEHSYQASSRVLTTVSAMLDDLLNAV 484


>gi|307945655|ref|ZP_07660991.1| flagellar basal-body rod protein FlgB [Roseibium sp. TrichSKD4]
 gi|307771528|gb|EFO30753.1| flagellar basal-body rod protein FlgB [Roseibium sp. TrichSKD4]
          Length = 138

 Score = 35.6 bits (80), Expect = 5.5,   Method: Composition-based stats.
 Identities = 15/94 (15%), Positives = 34/94 (36%), Gaps = 4/94 (4%)

Query: 5   FNIGL-AAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDIDQKISFVA 60
               L +     + R   +++N++N DT  +   +V    F++ VG  ++ +   ++ V 
Sbjct: 12  LFQALKSKMQWHQVRQGVLSENVANADTPRYSAREVTAFSFADHVGLAQSGLSTSVTKVG 71

Query: 61  SGKEYLSKEVGSFISTGTELDFALEGDAWFALES 94
                 +  V S        +    G+     E 
Sbjct: 72  HISGSAAPGVASKAEERDMFEVTPSGNNVVLEEQ 105


>gi|295688393|ref|YP_003592086.1| hypothetical protein Cseg_0963 [Caulobacter segnis ATCC 21756]
 gi|295430296|gb|ADG09468.1| protein of unknown function DUF1078 domain protein [Caulobacter
           segnis ATCC 21756]
          Length = 79

 Score = 35.6 bits (80), Expect = 5.6,   Method: Composition-based stats.
 Identities = 3/36 (8%), Positives = 11/36 (30%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            +   E  + I     F +   ++   ++     + 
Sbjct: 41  VDYGKERVEQISAQYDFRANAKVVQTADQMTGALLN 76


>gi|332297606|ref|YP_004439528.1| flagellar basal-body rod protein FlgB [Treponema brennaborense
          DSM 12168]
 gi|332180709|gb|AEE16397.1| flagellar basal-body rod protein FlgB [Treponema brennaborense
          DSM 12168]
          Length = 138

 Score = 35.6 bits (80), Expect = 5.7,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 16/41 (39%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51
          A  A   R    A+N++N++   F+   V F   +      
Sbjct: 14 AMDASTLRYQVSANNLANSEVPNFKRTSVNFESQLKRALES 54


>gi|254510289|ref|ZP_05122356.1| flagellar basal-body rod protein; FlgB [Rhodobacteraceae
          bacterium KLH11]
 gi|221534000|gb|EEE36988.1| flagellar basal-body rod protein; FlgB [Rhodobacteraceae
          bacterium KLH11]
          Length = 115

 Score = 35.6 bits (80), Expect = 5.7,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 16/37 (43%), Gaps = 1/37 (2%)

Query: 17 QRLSTVADNMSNTDTVGFR-TIKVKFSEVVGAIKNDI 52
          QR + ++ NM+N DT G++      F  V        
Sbjct: 7  QRQAVISRNMANADTPGYQPKDITPFQNVFENSAAGG 43


>gi|319406973|emb|CBI80610.1| Flagellar basal-body rod protein flgB [Bartonella sp. 1-1C]
          Length = 128

 Score = 35.6 bits (80), Expect = 5.7,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 15 LEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGA 47
          L  R   +A N++N +T G++   V+ F+ V+  
Sbjct: 17 LSVRQKAIASNVANANTPGYKARDVEDFTAVLQN 50


>gi|239834445|ref|ZP_04682773.1| flagellar basal-body rod protein FlgB [Ochrobactrum intermedium
          LMG 3301]
 gi|239822508|gb|EEQ94077.1| flagellar basal-body rod protein FlgB [Ochrobactrum intermedium
          LMG 3301]
          Length = 126

 Score = 35.6 bits (80), Expect = 5.8,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)

Query: 15 LEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIK 49
          L  R +TVA N++N +T  FR   V+ F++V+   +
Sbjct: 17 LSVRQATVAGNVANANTPDFRARDVQPFADVLDKTQ 52


>gi|1086558|gb|AAB68965.1| FlgB [Agrobacterium tumefaciens]
          Length = 134

 Score = 35.6 bits (80), Expect = 5.8,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 17/40 (42%), Gaps = 1/40 (2%)

Query: 15 LEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIKNDID 53
          L  R   VA N++N +T  F    V  F  V+ A    + 
Sbjct: 21 LSVRQEVVATNIANANTPKFHAKDVSPFEAVMQATSQQVG 60


>gi|259417223|ref|ZP_05741142.1| flagellar hook-associated protein FlgK [Silicibacter sp. TrichCH4B]
 gi|259346129|gb|EEW57943.1| flagellar hook-associated protein FlgK [Silicibacter sp. TrichCH4B]
          Length = 482

 Score = 35.6 bits (80), Expect = 5.8,   Method: Composition-based stats.
 Identities = 6/102 (5%), Positives = 31/102 (30%), Gaps = 1/102 (0%)

Query: 138 EIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRG 197
             +    +   +     + +    +  ++   +       +               ++  
Sbjct: 381 NNYAEAMEATNTITSPGLGSGDYSAYAIAANLMTNFTQENTWAEQELAYSSAIYSDIQSR 440

Query: 198 FLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            LE    ++  E+  ++ +   + +   ++   ++ M E +R
Sbjct: 441 ELEQG-VDTDAELQTLMMIETVYGANARMLQAIDEMMQELMR 481



 Score = 35.6 bits (80), Expect = 6.6,   Method: Composition-based stats.
 Identities = 8/31 (25%), Positives = 16/31 (51%)

Query: 4  SFNIGLAAQLALEQRLSTVADNMSNTDTVGF 34
          + +  +    A  +  S V+DN++N  T G+
Sbjct: 6  ALSSAMTGITAAGRSTSVVSDNLANALTEGY 36


>gi|167576659|ref|ZP_02369533.1| flagellar basal-body rod protein FlgB [Burkholderia thailandensis
          TXDOH]
          Length = 109

 Score = 35.6 bits (80), Expect = 5.8,   Method: Composition-based stats.
 Identities = 8/47 (17%), Positives = 16/47 (34%)

Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58
               +R   +A N++N DT G++   + F   +             
Sbjct: 1  MKLRAERTKIIASNLANLDTPGYQAQDLDFKRSLAEAAGGGAGARLG 47


>gi|167567747|ref|ZP_02360663.1| flagellar basal-body rod protein FlgB [Burkholderia oklahomensis
           EO147]
 gi|167574698|ref|ZP_02367572.1| flagellar basal-body rod protein FlgB [Burkholderia oklahomensis
           C6786]
          Length = 117

 Score = 35.6 bits (80), Expect = 5.9,   Method: Composition-based stats.
 Identities = 15/104 (14%), Positives = 32/104 (30%), Gaps = 7/104 (6%)

Query: 1   MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS---EVVGAIKNDIDQKIS 57
           M    +       A   ++  +A N++N DT G++   + F              D   +
Sbjct: 1   MD--LHPAALKLRAERTKM--LASNLANLDTPGYQARDLDFKASMAAAAGSGRRGDAFGA 56

Query: 58  FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101
            +        +        G  ++  +E  A+    +     LT
Sbjct: 57  ALDGEATLGYRVPYQPAQDGNTVELGVEQAAFAQNAADFQTSLT 100


>gi|254255084|ref|ZP_04948401.1| Flagellar basal body protein [Burkholderia dolosa AUO158]
 gi|124899729|gb|EAY71572.1| Flagellar basal body protein [Burkholderia dolosa AUO158]
          Length = 160

 Score = 35.6 bits (80), Expect = 5.9,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 35/100 (35%), Gaps = 1/100 (1%)

Query: 2   QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           +    +  AA     +R   +A N++N  T GF+   + F   +  +  D D   +    
Sbjct: 45  ERDMGVHAAALKVRTERTRILASNLANGATPGFQARDIDFRASLERMLTD-DAFAAAAHG 103

Query: 62  GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101
           G     +        G  ++  +E  A+    +     LT
Sbjct: 104 GDAPKYRVPSRPSVDGNTVELGVEQAAFAQNAADFQASLT 143


>gi|86747251|ref|YP_483747.1| putative flagellar basal-body rod protein flgC [Rhodopseudomonas
          palustris HaA2]
 gi|86570279|gb|ABD04836.1| putative flagellar basal-body rod protein flgC [Rhodopseudomonas
          palustris HaA2]
          Length = 136

 Score = 35.6 bits (80), Expect = 5.9,   Method: Composition-based stats.
 Identities = 9/33 (27%), Positives = 16/33 (48%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG 33
          M +   I ++   A  +RL   A N++N  + G
Sbjct: 1  MSSISAIAVSGLKAATRRLEVSASNVANQQSTG 33


>gi|86747894|ref|YP_484390.1| flagellar hook-associated protein [Rhodopseudomonas palustris
          HaA2]
 gi|86570922|gb|ABD05479.1| Flagellar hook-associated protein [Rhodopseudomonas palustris
          HaA2]
          Length = 588

 Score = 35.6 bits (80), Expect = 5.9,   Method: Composition-based stats.
 Identities = 9/28 (32%), Positives = 18/28 (64%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTVGF 34
          I + + +A + ++S  + N+SN DT G+
Sbjct: 9  IAVGSLMASQVQISVASSNVSNADTTGY 36


>gi|1518046|gb|AAB62740.1| FlgK protein [Borrelia burgdorferi]
          Length = 616

 Score = 35.6 bits (80), Expect = 5.9,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 19/46 (41%), Gaps = 3/46 (6%)

Query: 1  MQT---SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43
          M +      IG  +  A +  ++TV  N+SN    G+   +V    
Sbjct: 1  MDSTFSGIEIGKRSLFAHKDAMNTVGHNLSNATKPGYSRQRVTMKT 46


>gi|2459711|gb|AAB71787.1| FlgB [Agrobacterium tumefaciens]
          Length = 134

 Score = 35.6 bits (80), Expect = 6.0,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 17/40 (42%), Gaps = 1/40 (2%)

Query: 15 LEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIKNDID 53
          L  R   VA N++N +T  F    V  F  V+ A    + 
Sbjct: 21 LSVRQEVVATNIANANTPKFHAKDVSPFEAVMQATSQQVG 60


>gi|159184364|ref|NP_353582.2| flagellar basal body rod protein FlgB [Agrobacterium tumefaciens
          str. C58]
 gi|159139678|gb|AAK86367.2| flagellar basal-body rod protein FlgB [Agrobacterium tumefaciens
          str. C58]
          Length = 130

 Score = 35.6 bits (80), Expect = 6.0,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 17/40 (42%), Gaps = 1/40 (2%)

Query: 15 LEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIKNDID 53
          L  R   VA N++N +T  F    V  F  V+ A    + 
Sbjct: 17 LSVRQEVVATNIANANTPKFHAKDVSPFEAVMQATSQQVG 56


>gi|209547925|ref|YP_002279842.1| flagellar basal body rod protein FlgB [Rhizobium leguminosarum
          bv. trifolii WSM2304]
 gi|209533681|gb|ACI53616.1| flagellar basal-body rod protein [Rhizobium leguminosarum bv.
          trifolii WSM2304]
          Length = 130

 Score = 35.6 bits (80), Expect = 6.1,   Method: Composition-based stats.
 Identities = 10/28 (35%), Positives = 14/28 (50%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVV 45
          R   VA N++N +T  FR   V   + V
Sbjct: 20 RQQVVAGNIANANTPKFRAKDVTPFDAV 47


>gi|190890360|ref|YP_001976902.1| flagellar basal-body rod protein [Rhizobium etli CIAT 652]
 gi|190695639|gb|ACE89724.1| flagellar basal-body rod protein [Rhizobium etli CIAT 652]
          Length = 130

 Score = 35.6 bits (80), Expect = 6.1,   Method: Composition-based stats.
 Identities = 10/28 (35%), Positives = 14/28 (50%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVV 45
          R   VA N++N +T  FR   V   + V
Sbjct: 20 RQQVVAGNIANANTPKFRAKDVTPFDAV 47


>gi|327193033|gb|EGE59945.1| flagellar basal-body rod protein [Rhizobium etli CNPAF512]
          Length = 130

 Score = 35.6 bits (80), Expect = 6.2,   Method: Composition-based stats.
 Identities = 10/28 (35%), Positives = 14/28 (50%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVV 45
          R   VA N++N +T  FR   V   + V
Sbjct: 20 RQQVVAGNIANANTPKFRAKDVTPFDAV 47


>gi|86356309|ref|YP_468201.1| flagellar basal body rod protein FlgB [Rhizobium etli CFN 42]
 gi|86280411|gb|ABC89474.1| flagellar basal-body rod protein [Rhizobium etli CFN 42]
          Length = 130

 Score = 35.6 bits (80), Expect = 6.2,   Method: Composition-based stats.
 Identities = 10/28 (35%), Positives = 14/28 (50%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVV 45
          R   VA N++N +T  FR   V   + V
Sbjct: 20 RQQVVAGNIANANTPKFRAKDVTPFDAV 47


>gi|32490787|ref|NP_871041.1| hypothetical protein WGLp038 [Wigglesworthia glossinidia
          endosymbiont of Glossina brevipalpis]
 gi|25165993|dbj|BAC24184.1| flgB [Wigglesworthia glossinidia endosymbiont of Glossina
          brevipalpis]
          Length = 136

 Score = 35.6 bits (80), Expect = 6.2,   Method: Composition-based stats.
 Identities = 6/34 (17%), Positives = 18/34 (52%)

Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50
           R + ++ N++N DT  +++  + F +++     
Sbjct: 21 NRQAIISSNIANADTPKYQSRDIDFKKLLKNFNE 54


>gi|126730122|ref|ZP_01745934.1| flagellar hook-associated protein K [Sagittula stellata E-37]
 gi|126709502|gb|EBA08556.1| flagellar hook-associated protein K [Sagittula stellata E-37]
          Length = 482

 Score = 35.6 bits (80), Expect = 6.4,   Method: Composition-based stats.
 Identities = 3/36 (8%), Positives = 15/36 (41%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
            ++  E+ +++ + Q + +   +I   +      + 
Sbjct: 446 VDTDQELQKLMQVEQYYTANAKVISTVDDLFERLLS 481


>gi|116250479|ref|YP_766317.1| flagellar basal body rod protein FlgB [Rhizobium leguminosarum
          bv. viciae 3841]
 gi|115255127|emb|CAK06201.1| putative flagellar basal-body rod protein [Rhizobium
          leguminosarum bv. viciae 3841]
          Length = 130

 Score = 35.6 bits (80), Expect = 6.4,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 15/33 (45%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50
          R   VA N++N +T  FR   V   + V    N
Sbjct: 20 RQQVVAGNIANANTPKFRAKDVTPFDAVLDNSN 52


>gi|269965642|ref|ZP_06179755.1| Flagellar basal-body rod protein C [Vibrio alginolyticus 40B]
 gi|269829710|gb|EEZ83946.1| Flagellar basal-body rod protein C [Vibrio alginolyticus 40B]
          Length = 138

 Score = 35.6 bits (80), Expect = 6.5,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 34/96 (35%), Gaps = 6/96 (6%)

Query: 10  AAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63
           +A  A   RL+TVA N++N D V       ++ +K  F+ V    +   +      A  +
Sbjct: 12  SAMTAQTVRLNTVASNLANADAVSANPEDAYKALKPVFATVYQKTQMTTENGAYPNAEVR 71

Query: 64  EYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99
                +         E +  L  D  +       ++
Sbjct: 72  IVDVVKNAGDAEKRFEPNNPLANDEGYVFYPDIDVV 107



 Score = 35.2 bits (79), Expect = 7.8,   Method: Composition-based stats.
 Identities = 6/31 (19%), Positives = 16/31 (51%)

Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227
           G++   + + + EM  M+  T+ F +   ++
Sbjct: 97  GYVFYPDIDVVAEMADMMSATRSFETNVEVL 127


>gi|222147590|ref|YP_002548547.1| flagellar hook-associated protein FlgK [Agrobacterium vitis S4]
 gi|221734578|gb|ACM35541.1| flagellar-associated protein [Agrobacterium vitis S4]
          Length = 484

 Score = 35.6 bits (80), Expect = 6.5,   Method: Composition-based stats.
 Identities = 6/35 (17%), Positives = 18/35 (51%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
            N   E+ +M+ + Q + + T L++  ++ +   +
Sbjct: 447 VNLDEELSKMLDIEQSYKASTKLMNAVDEMLKSLL 481



 Score = 34.8 bits (78), Expect = 9.8,   Method: Composition-based stats.
 Identities = 5/39 (12%), Positives = 16/39 (41%), Gaps = 1/39 (2%)

Query: 3  TSFNIGLAAQLALEQRLSTVADNMSNTDTVGF-RTIKVK 40
          ++ N    +      +   ++ N++N+ T G+ +     
Sbjct: 5  STMNTATTSLGNSSTQSQVLSKNIANSQTEGYVKRDAAT 43


>gi|20141426|sp|Q44335|FLGB_AGRT5 RecName: Full=Flagellar basal-body rod protein flgB
          Length = 134

 Score = 35.6 bits (80), Expect = 6.5,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 17/40 (42%), Gaps = 1/40 (2%)

Query: 15 LEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIKNDID 53
          L  R   VA N++N +T  F    V  F  V+ A    + 
Sbjct: 21 LSVRQEVVATNIANANTPKFHAKDVSPFEAVMQATSQQVG 60


>gi|307721125|ref|YP_003892265.1| hypothetical protein Saut_1205 [Sulfurimonas autotrophica DSM
          16294]
 gi|306979218|gb|ADN09253.1| protein of unknown function DUF1078 domain protein [Sulfurimonas
          autotrophica DSM 16294]
          Length = 101

 Score = 35.6 bits (80), Expect = 6.6,   Method: Composition-based stats.
 Identities = 9/26 (34%), Positives = 18/26 (69%)

Query: 9  LAAQLALEQRLSTVADNMSNTDTVGF 34
          +++  A +  L+T A+N++N +T GF
Sbjct: 7  ISSIGAHQTMLNTTANNVANVNTDGF 32


>gi|323490139|ref|ZP_08095359.1| flagellar basal body rod protein FlgB [Planococcus donghaensis
          MPA1U2]
 gi|323396187|gb|EGA89013.1| flagellar basal body rod protein FlgB [Planococcus donghaensis
          MPA1U2]
          Length = 133

 Score = 35.6 bits (80), Expect = 6.8,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 20/43 (46%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53
          A  A   +    + N++N DT  +++ KV F   +    ++ +
Sbjct: 14 ALSAATLKQRVHSANIANVDTANYKSKKVDFQAALNTAMSNQN 56


>gi|149173751|ref|ZP_01852380.1| probable flagellar hook-associated protein [Planctomyces maris DSM
           8797]
 gi|148847281|gb|EDL61615.1| probable flagellar hook-associated protein [Planctomyces maris DSM
           8797]
          Length = 558

 Score = 35.6 bits (80), Expect = 6.9,   Method: Composition-based stats.
 Identities = 5/38 (13%), Positives = 13/38 (34%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239
           S  +   E   ++   + F S   L+   ++     + 
Sbjct: 520 SGVSIDEETINVLTYQRAFQSAARLVSTIDELFTILLN 557


>gi|218659923|ref|ZP_03515853.1| flagellar basal body rod protein FlgB [Rhizobium etli IE4771]
          Length = 44

 Score = 35.2 bits (79), Expect = 7.2,   Method: Composition-based stats.
 Identities = 9/23 (39%), Positives = 12/23 (52%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVK 40
          R   VA N++N +T  FR   V 
Sbjct: 20 RQQVVAGNIANANTPKFRAKDVT 42


>gi|283834457|ref|ZP_06354198.1| flagellar basal-body rod protein FlgC [Citrobacter youngae ATCC
           29220]
 gi|291070004|gb|EFE08113.1| flagellar basal-body rod protein FlgC [Citrobacter youngae ATCC
           29220]
          Length = 143

 Score = 35.2 bits (79), Expect = 7.2,   Method: Composition-based stats.
 Identities = 10/89 (11%), Positives = 32/89 (35%), Gaps = 3/89 (3%)

Query: 150 QKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYE 209
               +I     +++D +   V+             P   ++    + GF+   + N + +
Sbjct: 53  YNNSLIGGHNRHAIDGASVQVQDVMQSGGAVKRYEPHHPMAD---QNGFVWYPDVNVVEQ 109

Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           M  M+  ++ F +   +++  +      +
Sbjct: 110 MADMMSASRDFETDVDVLNNVKSMQQSLL 138



 Score = 34.8 bits (78), Expect = 9.7,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 34/91 (37%), Gaps = 7/91 (7%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVV-GAIKNDIDQKISFV 59
          I  +A  A   RL+TVA NM+N ++        ++     F+ V   ++    ++     
Sbjct: 9  ISGSAMTAQTIRLNTVASNMANAESPASSEAQAYKARSPVFAAVYNNSLIGGHNRHAIDG 68

Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWF 90
          AS +     + G  +          + + + 
Sbjct: 69 ASVQVQDVMQSGGAVKRYEPHHPMADQNGFV 99


>gi|296124186|ref|YP_003631964.1| flagellar basal-body rod protein FlgB [Planctomyces limnophilus
          DSM 3776]
 gi|296016526|gb|ADG69765.1| flagellar basal-body rod protein FlgB [Planctomyces limnophilus
          DSM 3776]
          Length = 158

 Score = 35.2 bits (79), Expect = 7.2,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 31/78 (39%)

Query: 15 LEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFI 74
           E R   +A N++N DT G+R   +  ++   A+K   + + +  AS    L+       
Sbjct: 21 AELRQDVLAGNVANIDTPGYRMRDLPVADFQNALKKAYESQTAQPASLHPPLANPENPLT 80

Query: 75 STGTELDFALEGDAWFAL 92
             +    ++    +F  
Sbjct: 81 DLISPSATSVHTTNFFPE 98


>gi|153011527|ref|YP_001372741.1| flagellar basal body rod protein FlgB [Ochrobactrum anthropi ATCC
          49188]
 gi|151563415|gb|ABS16912.1| flagellar basal-body rod protein FlgB [Ochrobactrum anthropi ATCC
          49188]
          Length = 126

 Score = 35.2 bits (79), Expect = 7.2,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)

Query: 15 LEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIK 49
          L  R +TVA N++N +T  FR   V+ F++V+   +
Sbjct: 17 LSVRQATVAGNVANANTPDFRARDVQPFADVLDKTQ 52


>gi|153951648|ref|YP_001398444.1| flagellar basal body rod protein FlgB [Campylobacter jejuni
          subsp. doylei 269.97]
 gi|152939094|gb|ABS43835.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni
          subsp. doylei 269.97]
          Length = 143

 Score = 35.2 bits (79), Expect = 7.2,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 21/48 (43%), Gaps = 2/48 (4%)

Query: 5  FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
             G  A   L  +L  +  N++N DT  ++   ++F   +    N+I
Sbjct: 10 LITGALAGRNLRNQL--INANLANVDTPFYKARDIEFETALVNRANEI 55


>gi|92116945|ref|YP_576674.1| flagellar basal body rod protein FlgB [Nitrobacter hamburgensis
          X14]
 gi|91799839|gb|ABE62214.1| flagellar basal body rod protein [Nitrobacter hamburgensis X14]
          Length = 135

 Score = 35.2 bits (79), Expect = 7.3,   Method: Composition-based stats.
 Identities = 12/81 (14%), Positives = 30/81 (37%), Gaps = 5/81 (6%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           ++           ++R   +A+N++N+DT  F+       ++V    +      S  A+
Sbjct: 6  ISALAALRTRMQWHQERQRVLAENIANSDTPNFKP-----RDLVEPKFDAQGGNASGGAT 60

Query: 62 GKEYLSKEVGSFISTGTELDF 82
               +    +   +G   +F
Sbjct: 61 LAMMRTTSGQTIAGSGPASNF 81


>gi|332162895|ref|YP_004299472.1| flagellar hook-associated protein [Yersinia enterocolitica subsp.
          palearctica 105.5R(r)]
 gi|325667125|gb|ADZ43769.1| Flagellar hook-associated protein [Yersinia enterocolitica subsp.
          palearctica 105.5R(r)]
          Length = 456

 Score = 35.2 bits (79), Expect = 7.4,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 23/58 (39%), Gaps = 1/58 (1%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
          I  +   A +  LS  A N+SN +T G+   + +    VG   N+     + V     
Sbjct: 6  IAQSGLQAAQAGLSAAAMNLSNANTPGYSRQRAE-QSAVGTTGNNAYSAGNGVNVDAF 62


>gi|170748653|ref|YP_001754913.1| flagellar basal body rod protein FlgB [Methylobacterium
          radiotolerans JCM 2831]
 gi|170655175|gb|ACB24230.1| flagellar basal body rod protein [Methylobacterium radiotolerans
          JCM 2831]
          Length = 133

 Score = 35.2 bits (79), Expect = 7.5,   Method: Composition-based stats.
 Identities = 15/81 (18%), Positives = 27/81 (33%), Gaps = 3/81 (3%)

Query: 10 AAQLALEQRLSTVADNMSNTDTVGFR-TIKVK--FSEVVGAIKNDIDQKISFVASGKEYL 66
                + R   +A+N++N D  GF+    V+  F    GA+           A      
Sbjct: 14 TRMQWAQARQGVIAENVANADMPGFKPRDLVEPRFDRATGALATTGSSLTLTSAGHMAPP 73

Query: 67 SKEVGSFISTGTELDFALEGD 87
           + VG+        +    G+
Sbjct: 74 GQSVGADSKRAKGFEIRPSGN 94


>gi|90408057|ref|ZP_01216228.1| putative polar flagellar FlgB [Psychromonas sp. CNPT3]
 gi|90310814|gb|EAS38928.1| putative polar flagellar FlgB [Psychromonas sp. CNPT3]
          Length = 133

 Score = 35.2 bits (79), Expect = 7.6,   Method: Composition-based stats.
 Identities = 9/65 (13%), Positives = 22/65 (33%)

Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIS 75
           +R   +A N++N DT  ++   + F E + + ++     +S                 +
Sbjct: 20 SRRAEILASNLTNADTPDYKARDLNFKEALLSARSGSGISLSRTNEIHRTGHSFSMQQSN 79

Query: 76 TGTEL 80
               
Sbjct: 80 QYYRT 84


>gi|85060038|ref|YP_455740.1| flagellar basal-body rod protein FlgB [Sodalis glossinidius str.
          'morsitans']
 gi|84780558|dbj|BAE75335.1| flagellar basal-body rod protein FlgB [Sodalis glossinidius str.
          'morsitans']
          Length = 130

 Score = 35.2 bits (79), Expect = 7.6,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 21/58 (36%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSK 68
          A     QR S +A N+ N DT G++   + FS  +             +A      + 
Sbjct: 8  ALNLRAQRQSIIAANIVNADTPGYQARDIDFSTELSKALTQGRASGETLALTTTSAAH 65


>gi|163844343|ref|YP_001621998.1| flagellar basal body rod protein FlgB [Brucella suis ATCC 23445]
 gi|163675066|gb|ABY39176.1| flagellar basal-body rod protein FlgB [Brucella suis ATCC 23445]
          Length = 126

 Score = 35.2 bits (79), Expect = 7.6,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)

Query: 15 LEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIK 49
          L  R +TVA N++N +T  FR   V+ F++V+   +
Sbjct: 17 LSVRQATVAGNVANANTPDFRARDVQPFADVLDKTQ 52


>gi|330863345|emb|CBX73468.1| hypothetical protein YEW_ES20630 [Yersinia enterocolitica W22703]
          Length = 298

 Score = 35.2 bits (79), Expect = 7.7,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 23/58 (39%), Gaps = 1/58 (1%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
          I  +   A +  LS  A N+SN +T G+   + +    VG   N+     + V     
Sbjct: 6  IAQSGLQAAQAGLSAAAMNLSNANTPGYSRQRAE-QSAVGTTGNNAYSAGNGVNVDAF 62


>gi|254720613|ref|ZP_05182424.1| flagellar basal body rod protein FlgB [Brucella sp. 83/13]
 gi|265985653|ref|ZP_06098388.1| flagellar basal-body rod protein FlgB [Brucella sp. 83/13]
 gi|306838575|ref|ZP_07471412.1| flagellar basal-body rod protein FlgB [Brucella sp. NF 2653]
 gi|306841052|ref|ZP_07473776.1| flagellar basal-body rod protein FlgB [Brucella sp. BO2]
 gi|264664245|gb|EEZ34506.1| flagellar basal-body rod protein FlgB [Brucella sp. 83/13]
 gi|306288941|gb|EFM60241.1| flagellar basal-body rod protein FlgB [Brucella sp. BO2]
 gi|306406361|gb|EFM62603.1| flagellar basal-body rod protein FlgB [Brucella sp. NF 2653]
          Length = 126

 Score = 35.2 bits (79), Expect = 7.7,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)

Query: 15 LEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIK 49
          L  R +TVA N++N +T  FR   V+ F++V+   +
Sbjct: 17 LSVRQATVAGNVANANTPDFRARDVQPFADVLDKTQ 52


>gi|306846281|ref|ZP_07478842.1| flagellar basal-body rod protein FlgB [Brucella sp. BO1]
 gi|306273276|gb|EFM55145.1| flagellar basal-body rod protein FlgB [Brucella sp. BO1]
          Length = 126

 Score = 35.2 bits (79), Expect = 7.7,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)

Query: 15 LEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIK 49
          L  R +TVA N++N +T  FR   V+ F++V+   +
Sbjct: 17 LSVRQATVAGNVANANTPDFRARDVQPFADVLDKTQ 52


>gi|285018722|ref|YP_003376433.1| hypothetical protein XALc_1955 [Xanthomonas albilineans GPE PC73]
 gi|283473940|emb|CBA16441.1| hypothetical protein XALc_1955 [Xanthomonas albilineans]
          Length = 102

 Score = 35.2 bits (79), Expect = 7.7,   Method: Composition-based stats.
 Identities = 8/26 (30%), Positives = 12/26 (46%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRT 36
             A    L   A+N++N  T GF+ 
Sbjct: 14 GMRAAASGLQVRANNIANLATDGFQR 39


>gi|17989434|ref|NP_542067.1| flagellar basal body rod protein FlgB [Brucella melitensis bv. 1
          str. 16M]
 gi|23499913|ref|NP_699353.1| flagellar basal body rod protein FlgB [Brucella suis 1330]
 gi|161620233|ref|YP_001594119.1| flagellar basal body rod protein FlgB [Brucella canis ATCC 23365]
 gi|225628622|ref|ZP_03786656.1| flagellar basal-body rod protein FlgB [Brucella ceti str. Cudo]
 gi|225686009|ref|YP_002733981.1| flagellar basal body rod protein FlgB [Brucella melitensis ATCC
          23457]
 gi|254702573|ref|ZP_05164401.1| flagellar basal body rod protein FlgB [Brucella suis bv. 3 str.
          686]
 gi|254706295|ref|ZP_05168123.1| flagellar basal body rod protein FlgB [Brucella pinnipedialis
          M163/99/10]
 gi|254711411|ref|ZP_05173222.1| flagellar basal body rod protein FlgB [Brucella pinnipedialis
          B2/94]
 gi|254712010|ref|ZP_05173821.1| flagellar basal body rod protein FlgB [Brucella ceti M644/93/1]
 gi|254715079|ref|ZP_05176890.1| flagellar basal body rod protein FlgB [Brucella ceti M13/05/1]
 gi|256014939|ref|YP_003104948.1| flagellar basal body rod protein [Brucella microti CCM 4915]
 gi|256029959|ref|ZP_05443573.1| flagellar basal body rod protein FlgB [Brucella pinnipedialis
          M292/94/1]
 gi|256043070|ref|ZP_05446014.1| flagellar basal body rod protein FlgB [Brucella melitensis bv. 1
          str. Rev.1]
 gi|256059611|ref|ZP_05449809.1| flagellar basal body rod protein FlgB [Brucella neotomae 5K33]
 gi|256111946|ref|ZP_05452897.1| flagellar basal body rod protein FlgB [Brucella melitensis bv. 3
          str. Ether]
 gi|256158121|ref|ZP_05456039.1| flagellar basal body rod protein FlgB [Brucella ceti M490/95/1]
 gi|256252925|ref|ZP_05458461.1| flagellar basal body rod protein FlgB [Brucella ceti B1/94]
 gi|256262868|ref|ZP_05465400.1| flagellar basal-body rod protein FlgB [Brucella melitensis bv. 2
          str. 63/9]
 gi|260564300|ref|ZP_05834785.1| flagellar basal body rod protein FlgB [Brucella melitensis bv. 1
          str. 16M]
 gi|261216789|ref|ZP_05931070.1| flagellar basal-body rod protein FlgB [Brucella ceti M13/05/1]
 gi|261220016|ref|ZP_05934297.1| flagellar basal-body rod protein FlgB [Brucella ceti B1/94]
 gi|261313739|ref|ZP_05952936.1| flagellar basal-body rod protein FlgB [Brucella pinnipedialis
          M163/99/10]
 gi|261319019|ref|ZP_05958216.1| flagellar basal-body rod protein FlgB [Brucella pinnipedialis
          B2/94]
 gi|261319656|ref|ZP_05958853.1| flagellar basal-body rod protein FlgB [Brucella ceti M644/93/1]
 gi|261323580|ref|ZP_05962777.1| flagellar basal-body rod protein FlgB [Brucella neotomae 5K33]
 gi|261753153|ref|ZP_05996862.1| flagellar basal-body rod protein FlgB [Brucella suis bv. 3 str.
          686]
 gi|265986978|ref|ZP_06099535.1| flagellar basal-body rod protein FlgB [Brucella pinnipedialis
          M292/94/1]
 gi|265989508|ref|ZP_06102065.1| flagellar basal-body rod protein FlgB [Brucella melitensis bv. 1
          str. Rev.1]
 gi|265993393|ref|ZP_06105950.1| flagellar basal-body rod protein FlgB [Brucella melitensis bv. 3
          str. Ether]
 gi|265996638|ref|ZP_06109195.1| flagellar basal-body rod protein FlgB [Brucella ceti M490/95/1]
 gi|294853172|ref|ZP_06793844.1| flagellar basal-body rod protein FlgB [Brucella sp. NVSL 07-0026]
 gi|17985311|gb|AAL54331.1| flagellar basal-body rod protein flgb [Brucella melitensis bv. 1
          str. 16M]
 gi|23463490|gb|AAN33358.1| flagellar basal-body rod protein FlgB [Brucella suis 1330]
 gi|161337044|gb|ABX63348.1| flagellar basal-body rod protein FlgB [Brucella canis ATCC 23365]
 gi|225616468|gb|EEH13516.1| flagellar basal-body rod protein FlgB [Brucella ceti str. Cudo]
 gi|225642114|gb|ACO02027.1| flagellar basal-body rod protein FlgB [Brucella melitensis ATCC
          23457]
 gi|255997599|gb|ACU49286.1| flagellar basal body rod protein [Brucella microti CCM 4915]
 gi|260151943|gb|EEW87036.1| flagellar basal body rod protein FlgB [Brucella melitensis bv. 1
          str. 16M]
 gi|260918600|gb|EEX85253.1| flagellar basal-body rod protein FlgB [Brucella ceti B1/94]
 gi|260921878|gb|EEX88446.1| flagellar basal-body rod protein FlgB [Brucella ceti M13/05/1]
 gi|261292346|gb|EEX95842.1| flagellar basal-body rod protein FlgB [Brucella ceti M644/93/1]
 gi|261298242|gb|EEY01739.1| flagellar basal-body rod protein FlgB [Brucella pinnipedialis
          B2/94]
 gi|261299560|gb|EEY03057.1| flagellar basal-body rod protein FlgB [Brucella neotomae 5K33]
 gi|261302765|gb|EEY06262.1| flagellar basal-body rod protein FlgB [Brucella pinnipedialis
          M163/99/10]
 gi|261742906|gb|EEY30832.1| flagellar basal-body rod protein FlgB [Brucella suis bv. 3 str.
          686]
 gi|262550935|gb|EEZ07096.1| flagellar basal-body rod protein FlgB [Brucella ceti M490/95/1]
 gi|262764263|gb|EEZ10295.1| flagellar basal-body rod protein FlgB [Brucella melitensis bv. 3
          str. Ether]
 gi|263000177|gb|EEZ12867.1| flagellar basal-body rod protein FlgB [Brucella melitensis bv. 1
          str. Rev.1]
 gi|263092703|gb|EEZ16912.1| flagellar basal-body rod protein FlgB [Brucella melitensis bv. 2
          str. 63/9]
 gi|264659175|gb|EEZ29436.1| flagellar basal-body rod protein FlgB [Brucella pinnipedialis
          M292/94/1]
 gi|294818827|gb|EFG35827.1| flagellar basal-body rod protein FlgB [Brucella sp. NVSL 07-0026]
 gi|326410332|gb|ADZ67396.1| flagellar basal body rod protein FlgB [Brucella melitensis M28]
 gi|326553624|gb|ADZ88263.1| flagellar basal body rod protein FlgB [Brucella melitensis M5-90]
          Length = 126

 Score = 35.2 bits (79), Expect = 7.8,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)

Query: 15 LEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIK 49
          L  R +TVA N++N +T  FR   V+ F++V+   +
Sbjct: 17 LSVRQATVAGNVANANTPDFRARDVQPFADVLDKTQ 52


>gi|318604259|emb|CBY25757.1| flagellar hook-associated protein FlgK [Yersinia enterocolitica
          subsp. palearctica Y11]
          Length = 456

 Score = 35.2 bits (79), Expect = 7.9,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 23/58 (39%), Gaps = 1/58 (1%)

Query: 7  IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64
          I  +   A +  LS  A N+SN +T G+   + +    VG   N+     + V     
Sbjct: 6  IAQSGLQAAQAGLSAAAMNLSNANTPGYSRQRAE-QSAVGTTGNNAYSAGNGVNVDAF 62


>gi|114706768|ref|ZP_01439668.1| flagellar basal-body rod protein B [Fulvimarina pelagi HTCC2506]
 gi|114537716|gb|EAU40840.1| flagellar basal-body rod protein B [Fulvimarina pelagi HTCC2506]
          Length = 126

 Score = 35.2 bits (79), Expect = 7.9,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 24/52 (46%), Gaps = 3/52 (5%)

Query: 1  MQTSFNIGLAAQLA--LEQRLSTVADNMSNTDTVGFR-TIKVKFSEVVGAIK 49
          M   +   L ++ A  L  R + VA+N++N +T G+       F +V+    
Sbjct: 1  MDQVYLFSLTSKQADWLSHRQALVAENVANVNTPGYTAKDITPFEQVLDNTA 52


>gi|260568519|ref|ZP_05838988.1| flagellar basal-body rod protein FlgB [Brucella suis bv. 4 str.
          40]
 gi|260155184|gb|EEW90265.1| flagellar basal-body rod protein FlgB [Brucella suis bv. 4 str.
          40]
          Length = 126

 Score = 35.2 bits (79), Expect = 8.1,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)

Query: 15 LEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIK 49
          L  R +TVA N++N +T  FR   V+ F++V+   +
Sbjct: 17 LSVRQATVAGNVANANTPDFRARDVQPFADVLDKTQ 52


>gi|238927685|ref|ZP_04659445.1| flagellar hook-associated protein 1 [Selenomonas flueggei ATCC
           43531]
 gi|238884401|gb|EEQ48039.1| flagellar hook-associated protein 1 [Selenomonas flueggei ATCC
           43531]
          Length = 579

 Score = 35.2 bits (79), Expect = 8.1,   Method: Composition-based stats.
 Identities = 3/39 (7%), Positives = 15/39 (38%)

Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242
            +   E+  M+     + + + ++   ++ +   I +  
Sbjct: 537 VDWNEELSNMLKFQTGYGACSRVLTSMDEILDRLINSTG 575



 Score = 34.8 bits (78), Expect = 9.1,   Method: Composition-based stats.
 Identities = 7/66 (10%), Positives = 18/66 (27%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
               +  L T   N++N  T G+   +V  +      +  +   +              
Sbjct: 4  GIQNNQLSLDTTGHNITNASTEGYSRQRVDSAATNYQERPSLYGGVYVGGGVDVVALNRA 63

Query: 71 GSFIST 76
           +  + 
Sbjct: 64 RNIYAD 69


>gi|148557912|ref|YP_001257210.1| flagellar basal body rod protein FlgB [Brucella ovis ATCC 25840]
 gi|148369197|gb|ABQ62069.1| flagellar basal-body rod protein FlgB [Brucella ovis ATCC 25840]
          Length = 126

 Score = 35.2 bits (79), Expect = 8.2,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)

Query: 15 LEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIK 49
          L  R +TVA N++N +T  FR   V+ F++V+   +
Sbjct: 17 LSVRQATVAGNVANANTPDFRARDVQPFADVLDKTQ 52


>gi|224417698|ref|ZP_03655704.1| flagellar basal body rod protein FlgB [Helicobacter canadensis
          MIT 98-5491]
 gi|253827047|ref|ZP_04869932.1| flagellar basal body rod protein [Helicobacter canadensis MIT
          98-5491]
 gi|313141241|ref|ZP_07803434.1| flagellar basal body rod protein FlgB [Helicobacter canadensis
          MIT 98-5491]
 gi|253510453|gb|EES89112.1| flagellar basal body rod protein [Helicobacter canadensis MIT
          98-5491]
 gi|313130272|gb|EFR47889.1| flagellar basal body rod protein FlgB [Helicobacter canadensis
          MIT 98-5491]
          Length = 144

 Score = 35.2 bits (79), Expect = 8.3,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 18/37 (48%)

Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
            R   +A N++N  T  +R   + F +++    ++I
Sbjct: 21 SLRRDMIAGNIANVSTPMYRPKDINFEQMMANKADEI 57


>gi|75675325|ref|YP_317746.1| flagellar basal body rod protein FlgB [Nitrobacter winogradskyi
          Nb-255]
 gi|74420195|gb|ABA04394.1| Flagellar basal body rod protein [Nitrobacter winogradskyi
          Nb-255]
          Length = 135

 Score = 35.2 bits (79), Expect = 8.4,   Method: Composition-based stats.
 Identities = 15/93 (16%), Positives = 31/93 (33%), Gaps = 5/93 (5%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
           ++           ++R   +A+N++N+DT  FR       ++V    +      S   +
Sbjct: 6  ISALAALRTRMQWHQERQRVLAENIANSDTPNFRP-----HDLVEPTFDAQGGNASSGVT 60

Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALES 94
               +    S   +G    F   G+  F    
Sbjct: 61 LAMTRTTAGQSMAGSGASAHFGQNGNGGFQTRP 93


>gi|238752869|ref|ZP_04614334.1| Flagellar basal-body rod protein FlgB [Yersinia rohdei ATCC
          43380]
 gi|238708908|gb|EEQ01161.1| Flagellar basal-body rod protein FlgB [Yersinia rohdei ATCC
          43380]
          Length = 116

 Score = 35.2 bits (79), Expect = 8.4,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 25/79 (31%), Gaps = 6/79 (7%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
          Q +  +  AA      R   ++ N++N +T  F+   + F+  +   K         V  
Sbjct: 6  QKALGVHPAAMQLRLTRAELLSANLANVNTPNFQAKDIDFAAEMQRAKRG------GVGM 59

Query: 62 GKEYLSKEVGSFISTGTEL 80
              +   +    S     
Sbjct: 60 TSPQMKYRLPYQPSQDGNT 78


>gi|119947180|ref|YP_944860.1| flagellar basal-body rod protein FlgB [Psychromonas ingrahamii 37]
 gi|119865784|gb|ABM05261.1| flagellar basal-body rod protein FlgB [Psychromonas ingrahamii 37]
          Length = 117

 Score = 35.2 bits (79), Expect = 8.6,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 32/86 (37%), Gaps = 4/86 (4%)

Query: 15  LEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFI 74
             QR   +A+N++N+DT  ++   +       A  N I+ + + +   KE   +      
Sbjct: 19  HTQRTQILANNLANSDTPNYKAQDLT----YSATMNKINARDTQLNLSKEIFFRIPFQRS 74

Query: 75  STGTELDFALEGDAWFALESPRGIIL 100
             G  ++  +E   +          L
Sbjct: 75  ENGNTVELGIEQAKFAENNLNYQTSL 100


>gi|332162904|ref|YP_004299481.1| flagellar basal-body rod protein FlgB [Yersinia enterocolitica
          subsp. palearctica 105.5R(r)]
 gi|318604249|emb|CBY25747.1| flagellar basal-body rod protein FlgB [Yersinia enterocolitica
          subsp. palearctica Y11]
 gi|325667134|gb|ADZ43778.1| Flagellar basal-body rod protein FlgB [Yersinia enterocolitica
          subsp. palearctica 105.5R(r)]
 gi|330863354|emb|CBX73477.1| hypothetical protein YEW_ES20720 [Yersinia enterocolitica W22703]
          Length = 116

 Score = 35.2 bits (79), Expect = 8.7,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 24/79 (30%), Gaps = 6/79 (7%)

Query: 2  QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61
          Q +  +  AA      R   ++ N++N +T  F+   + F   +   K         V  
Sbjct: 6  QKALGVHPAAMQLRLTRAELLSANLANVNTPNFQAKDIDFGAEMQRAKRG------GVGM 59

Query: 62 GKEYLSKEVGSFISTGTEL 80
              +   +    S     
Sbjct: 60 TSPQMKYRLPYQPSQDGNT 78


>gi|316931494|ref|YP_004106476.1| hypothetical protein Rpdx1_0099 [Rhodopseudomonas palustris DX-1]
 gi|315599208|gb|ADU41743.1| protein of unknown function DUF1078 domain protein
          [Rhodopseudomonas palustris DX-1]
          Length = 136

 Score = 35.2 bits (79), Expect = 8.7,   Method: Composition-based stats.
 Identities = 9/33 (27%), Positives = 16/33 (48%)

Query: 1  MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG 33
          M    +I ++   A  +RL   A N++N  + G
Sbjct: 1  MSAIASIAVSGLNAATRRLEVSASNIANQRSTG 33


>gi|227820855|ref|YP_002824825.1| flagellar basal body rod protein FlgB [Sinorhizobium fredii
          NGR234]
 gi|227339854|gb|ACP24072.1| putative flagellar basal-body rod protein FlgB [Sinorhizobium
          fredii NGR234]
          Length = 126

 Score = 35.2 bits (79), Expect = 8.7,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 17/33 (51%), Gaps = 1/33 (3%)

Query: 18 RLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIK 49
          R + VA N++N +T  +R   V+ F  V+    
Sbjct: 20 RQNVVAGNIANANTPHYRAKDVQPFESVLQNTG 52


>gi|254699458|ref|ZP_05161286.1| flagellar basal body rod protein FlgB [Brucella suis bv. 5 str.
          513]
 gi|261749909|ref|ZP_05993618.1| flagellar basal-body rod protein FlgB [Brucella suis bv. 5 str.
          513]
 gi|261739662|gb|EEY27588.1| flagellar basal-body rod protein FlgB [Brucella suis bv. 5 str.
          513]
          Length = 126

 Score = 35.2 bits (79), Expect = 8.9,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)

Query: 15 LEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIK 49
          L  R +TVA N++N +T  FR   V+ F++V+   +
Sbjct: 17 LSVRQATVAGNVANANTPDFRARDVQPFADVLDKTQ 52


>gi|254503455|ref|ZP_05115606.1| hypothetical protein SADFL11_3494 [Labrenzia alexandrii DFL-11]
 gi|222439526|gb|EEE46205.1| hypothetical protein SADFL11_3494 [Labrenzia alexandrii DFL-11]
          Length = 129

 Score = 34.8 bits (78), Expect = 9.3,   Method: Composition-based stats.
 Identities = 14/87 (16%), Positives = 31/87 (35%), Gaps = 4/87 (4%)

Query: 5  FNIGL-AAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDIDQKISFVA 60
              L +     + R   +A+N++N+D+  F    V    F + +G     +  + + VA
Sbjct: 3  LFQALKSKMQWHQTRQGVLAENIANSDSPEFEARDVKAYSFDDHIGREAFGLTTERTSVA 62

Query: 61 SGKEYLSKEVGSFISTGTELDFALEGD 87
               +   +G         +    G+
Sbjct: 63 HISGMIGSGIGGKAERRDSFEITPSGN 89


>gi|328947991|ref|YP_004365328.1| flagellar basal-body rod protein FlgB [Treponema succinifaciens
          DSM 2489]
 gi|328448315|gb|AEB14031.1| flagellar basal-body rod protein FlgB [Treponema succinifaciens
          DSM 2489]
          Length = 139

 Score = 34.8 bits (78), Expect = 9.6,   Method: Composition-based stats.
 Identities = 10/72 (13%), Positives = 21/72 (29%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70
          A      R    A+N++N++   F+   V F   +       D + S             
Sbjct: 14 ALDVESLRYQVTANNIANSEVANFKRQSVNFESELKKAFVSRDNEHSSFRMATNDARHIQ 73

Query: 71 GSFISTGTELDF 82
                  +++ 
Sbjct: 74 SEVPRDWRDVEP 85


>gi|222824064|ref|YP_002575638.1| flagellar proximal rod protein FlgB [Campylobacter lari RM2100]
 gi|222539286|gb|ACM64387.1| flagellar proximal rod protein FlgB [Campylobacter lari RM2100]
          Length = 143

 Score = 34.8 bits (78), Expect = 9.7,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 18/42 (42%)

Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52
          A      R   +  N++N DT  ++   ++F   +    N+I
Sbjct: 14 ALAGRNLRSQMINSNLANVDTPFYKARDIEFETALVNRANEI 55


>gi|295189279|gb|ADF83466.1| putative head protein [Lactobacillus phage LBR48]
          Length = 367

 Score = 34.8 bits (78), Expect = 9.9,   Method: Composition-based stats.
 Identities = 9/37 (24%), Positives = 15/37 (40%)

Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238
           SN     +M  MI   Q F +   +ID    +  + +
Sbjct: 178 SNIQGGTKMATMIIDNQSFEADQRVIDAANDTKKQLV 214


>gi|197335280|ref|YP_002156703.1| flagellar basal-body rod protein FlgB [Vibrio fischeri MJ11]
 gi|197316770|gb|ACH66217.1| flagellar basal-body rod protein FlgB [Vibrio fischeri MJ11]
          Length = 131

 Score = 34.8 bits (78), Expect = 9.9,   Method: Composition-based stats.
 Identities = 6/35 (17%), Positives = 18/35 (51%)

Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50
           +R   +A N++  +T G++   + F + + +  +
Sbjct: 20 SERAEMLATNIAQANTPGYKAKGMDFQKALQSATS 54


>gi|239834426|ref|ZP_04682754.1| flagellar hook-associated protein FlgK [Ochrobactrum intermedium
           LMG 3301]
 gi|239822489|gb|EEQ94058.1| flagellar hook-associated protein FlgK [Ochrobactrum intermedium
           LMG 3301]
          Length = 484

 Score = 34.8 bits (78), Expect = 10.0,   Method: Composition-based stats.
 Identities = 5/43 (11%), Positives = 17/43 (39%), Gaps = 3/43 (6%)

Query: 202 SN---ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241
           SN    +   EM  ++ L   + + + ++      + + +  +
Sbjct: 442 SNANGVDMDTEMALLLDLEHSYQASSRVLTTISAMLDDLLNAV 484


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.310    0.117    0.347 

Lambda     K      H
   0.267   0.0358    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,661,955,673
Number of Sequences: 14124377
Number of extensions: 70364139
Number of successful extensions: 145519
Number of sequences better than 10.0: 6934
Number of HSP's better than 10.0 without gapping: 6782
Number of HSP's successfully gapped in prelim test: 152
Number of HSP's that attempted gapping in prelim test: 131594
Number of HSP's gapped (non-prelim): 10896
length of query: 243
length of database: 4,842,793,630
effective HSP length: 135
effective length of query: 108
effective length of database: 2,936,002,735
effective search space: 317088295380
effective search space used: 317088295380
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 79 (35.2 bits)