BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780685|ref|YP_003065098.1| flagellar basal body rod protein FlgF [Candidatus Liberibacter asiaticus str. psy62] (243 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done >gi|222100099|ref|YP_002534667.1| Flagellar basal-body rod protein FlgG [Thermotoga neapolitana DSM 4359] gi|221572489|gb|ACM23301.1| Flagellar basal-body rod protein FlgG [Thermotoga neapolitana DSM 4359] Length = 268 Score = 198 bits (504), Expect = 4e-49, Method: Composition-based stats. Identities = 53/258 (20%), Positives = 102/258 (39%), Gaps = 19/258 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S A + +L T+A+N++N DT G++ ++ +F +++ + Sbjct: 8 MMISLYSAATGMSAQQFKLDTIANNLANVDTTGYKKVRAEFQDLLYQYVKNAGTPTAATS 67 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRF 106 V + +G+F TG LD A+ GD +F ++ I TRDG F Sbjct: 68 TLPTGLYVGHGVRTAATTRIFTLGNFEQTGNALDLAIAGDGFFQIQLQDGRIAYTRDGSF 127 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 KV +G +V+++G V ++ + + + + T+ L Sbjct: 128 KVDSEGRIVTSNGLLLVPEITIPENAVSINVSPDGIVSAELQDGTIQQLGTITLVRFVNP 187 Query: 167 QGFVRRENSGI-SPNIPPTPLE----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221 G ++ + P+E +K+GFLE SN + + EM MI + + Sbjct: 188 SGLKSIGDNLYIATPASGDPIEGVPGQDGFGAIKQGFLEKSNVDVVREMVDMITAQRAYE 247 Query: 222 SITTLIDENEKSMLEAIR 239 + +I ++ + A Sbjct: 248 FNSRVIQTADEMLRTATN 265 >gi|170288994|ref|YP_001739232.1| flagellar basal-body rod protein FlgG [Thermotoga sp. RQ2] gi|170176497|gb|ACB09549.1| flagellar basal-body rod protein FlgG [Thermotoga sp. RQ2] Length = 261 Score = 198 bits (502), Expect = 7e-49, Method: Composition-based stats. Identities = 52/258 (20%), Positives = 102/258 (39%), Gaps = 19/258 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S A + +L T+A+N++N DT G++ ++ +F +++ + Sbjct: 1 MMISLYSAATGMSAQQFKLDTIANNLANVDTTGYKKVRAEFQDLLYQYVKNAGTPTAATS 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRF 106 V + +G+F TG LD A+ GD +F ++ I TRDG F Sbjct: 61 SLPTGLYVGHGVRTAATTRIFTLGNFEQTGNALDLAIAGDGFFQIQLQDGRIAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 K+ +G +V+++G V ++ + + + + T+ L Sbjct: 121 KIDSEGRIVTSNGLLLVPEITIPENAVSINVSPDGIVSAELQDGTIQELGTITLVRFVNP 180 Query: 167 QGFVRRENSGI-SPNIPPTPLE----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221 G ++ + P+E +K+GFLE SN + + EM MI + + Sbjct: 181 SGLKSIGDNLYIATPASGDPIEGVPGQDGFGAIKQGFLEKSNVDVVREMVDMITAQRAYE 240 Query: 222 SITTLIDENEKSMLEAIR 239 + +I ++ + A Sbjct: 241 FNSRVIQTADEMLRTATN 258 >gi|15644290|ref|NP_229342.1| flagellar basal-body rod protein FlgG [Thermotoga maritima MSB8] gi|148270380|ref|YP_001244840.1| flagellar basal-body rod protein FlgG [Thermotoga petrophila RKU-1] gi|281412686|ref|YP_003346765.1| flagellar basal-body rod protein FlgG [Thermotoga naphthophila RKU-10] gi|4982109|gb|AAD36609.1|AE001800_19 flagellar basal-body rod protein FlgG [Thermotoga maritima MSB8] gi|147735924|gb|ABQ47264.1| flagellar basal-body rod protein FlgG [Thermotoga petrophila RKU-1] gi|281373789|gb|ADA67351.1| flagellar basal-body rod protein FlgG [Thermotoga naphthophila RKU-10] Length = 261 Score = 197 bits (499), Expect = 1e-48, Method: Composition-based stats. Identities = 52/258 (20%), Positives = 102/258 (39%), Gaps = 19/258 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S A + +L T+A+N++N DT G++ ++ +F +++ + Sbjct: 1 MMISLYSAATGMSAQQFKLDTIANNLANVDTTGYKKVRAEFQDLLYQYVKNAGTPTAATS 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRF 106 V + +G+F TG LD A+ GD +F ++ I TRDG F Sbjct: 61 SLPTGLYVGHGVRTAATTRIFTLGNFEQTGNALDLAIAGDGFFQIQLQDGRIAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 K+ +G +V+++G V ++ + + + + T+ L Sbjct: 121 KMDSEGRIVTSNGLLLVPEITIPENAVSINVSPDGIVSAELQDGTIQELGTITLVRFVNP 180 Query: 167 QGFVRRENSGI-SPNIPPTPLE----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221 G ++ + P+E +K+GFLE SN + + EM MI + + Sbjct: 181 SGLKSIGDNLYIATPASGDPIEGVPGQDGFGAIKQGFLEKSNVDVVREMVDMITAQRAYE 240 Query: 222 SITTLIDENEKSMLEAIR 239 + +I ++ + A Sbjct: 241 FNSRVIQTADEMLRTATN 258 >gi|39998143|ref|NP_954094.1| flagellar basal-body rod protein FlgG [Geobacter sulfurreducens PCA] gi|39985089|gb|AAR36444.1| flagellar basal-body rod protein FlgG [Geobacter sulfurreducens PCA] Length = 242 Score = 195 bits (495), Expect = 5e-48, Method: Composition-based stats. Identities = 55/245 (22%), Positives = 102/245 (41%), Gaps = 8/245 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA---IKNDIDQKIS 57 M + L+ +A +RL +++N++N +T GF+ ++ F ++ A + Sbjct: 1 MNSGIYSALSGNIAAMKRLDVLSNNLANVNTPGFKKDRMTFESLLQAAGKVPQAGTTDAP 60 Query: 58 FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSA 117 + + GS TG D A++GD +F + +P G TR G FK+ G LV+A Sbjct: 61 VYSETAFFTDHSRGSVSQTGNTFDLAIDGDGFFVVNTPEGKAYTRQGNFKLDATGKLVTA 120 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177 G I + +GEI G + T+ + + N+ Sbjct: 121 DGYEVSGGGP-----IVINGSRVEINARGEILVDGSPVGTLEVVDFPKPYALQKNGNALF 175 Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 P P + + G V++G+LE SN +++ EM Q+I + F + + + +A Sbjct: 176 VPTDPQAVPQPVQGEPVRQGYLELSNVSAIQEMVQLIETQRFFEMCSKAVKAYDDMAGKA 235 Query: 238 IRNIA 242 + Sbjct: 236 ANEVG 240 >gi|298507080|gb|ADI85803.1| flagellar basal body rod protein FlgF [Geobacter sulfurreducens KN400] Length = 242 Score = 194 bits (493), Expect = 8e-48, Method: Composition-based stats. Identities = 56/245 (22%), Positives = 101/245 (41%), Gaps = 8/245 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA---IKNDIDQKIS 57 M + L+ +A +RL +++N++N +T GF+ ++ F ++ A + Sbjct: 1 MNSGIYSALSGNIAAMKRLDVLSNNLANVNTPGFKKDRMTFESLLQAAGKVPQAGTTDAP 60 Query: 58 FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSA 117 + + GS TG D A++GD +F + +P G TR G FK+ G LV+A Sbjct: 61 VYSETAFFTDHSRGSVSQTGNTFDLAIDGDGFFVVNTPEGKAYTRQGNFKLDATGKLVTA 120 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177 G I + +GEI G + T+ + + N+ Sbjct: 121 DGYEVSGGGP-----IVINGSRVEINARGEILVDGSPVGTLEVVDFPKPYALQKNGNALF 175 Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 P P + + G V++G LE SN +++ EM Q+I + F + I + +A Sbjct: 176 VPTDPQAVPQPVQGEPVRQGHLEYSNVSAIQEMVQLIETQRFFEMCSKAIKAYDDMAGKA 235 Query: 238 IRNIA 242 + Sbjct: 236 ANEVG 240 >gi|289523332|ref|ZP_06440186.1| flagellar basal-body rod protein FlgG [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503024|gb|EFD24188.1| flagellar basal-body rod protein FlgG [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 262 Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats. Identities = 50/262 (19%), Positives = 96/262 (36%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + G +A + L +++N++N +T G++ I+ +F +++ I + Sbjct: 1 MIRALWSGATGMIAQQSNLDVISNNLANVNTTGYKKIRAEFEDLIYQIGREPGAPVEPDS 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q G+ T D A+EGD +F + P G TRDG + Sbjct: 61 MIPTGVQVGLGTRLIGTSRIMSPGNLQVTDNPFDIAIEGDGFFQVTLPDGTMAYTRDGTW 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 V DG +V+++G +A + V + + I + L Sbjct: 121 HVDGDGQIVTSNGYLLEPQIAIPEDTVEITVSPTGEVYARQAGDVEPDEIGQIELARFVN 180 Query: 166 SQGFVRRENSGI-SPNIPPTP----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 QG + P + T+++G LE SN + EM MI + + Sbjct: 181 PQGLRAMGKNLFLETPASGFPILGQPGEEGFGTLRQGALEMSNVQVVEEMVSMIVSQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNIA 242 + + I ++ + + N+ Sbjct: 241 EANSKTIQTADELL-QIANNLR 261 >gi|319790434|ref|YP_004152067.1| flagellar basal-body rod protein FlgG [Thermovibrio ammonificans HB-1] gi|317114936|gb|ADU97426.1| flagellar basal-body rod protein FlgG [Thermovibrio ammonificans HB-1] Length = 266 Score = 192 bits (487), Expect = 4e-47, Method: Composition-based stats. Identities = 55/264 (20%), Positives = 96/264 (36%), Gaps = 26/264 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + L +++N++N +TVGF+ + F +++ D Sbjct: 1 MLRALWTSASGMEAQQTNLDVISNNIANVNTVGFKRSRANFEDLMYQDIRDPGVMSSEEN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP-RGIILTRDGRF 106 Q V GS I T LD A++G +F +E P G TR G F Sbjct: 61 RVPTGIQIGLGVKLSDVSKIFTQGSLIKTDKPLDVAIQGPGFFKIELPGGGEAYTRAGDF 120 Query: 107 KVTDDGSLVSASGK------YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 ++ ++G +V+ G V I I +++ V G Q + T+ L Sbjct: 121 QLDNEGYIVTPEGYRLSPNIQISAPETVVNISISPNGKVYVVRNTGG-QQVTEEAGTIKL 179 Query: 161 YSVDMSQGFVRRENSGISPN-IPPTPLE----DLSGVTVKRGFLEDSNANSMYEMGQMIH 215 Y G + P+E + +GFLE SN N + EM +I Sbjct: 180 YRFINPAGLKAIGGNLFVQTEASGEPIEGDPNTDGFGKLTQGFLEASNVNIVEEMVNLIV 239 Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239 + + + I ++ + Sbjct: 240 AQRAYEINSKGIIAADEMLRTVAS 263 >gi|225850285|ref|YP_002730519.1| flagellar basal-body rod protein FlgG [Persephonella marina EX-H1] gi|225645911|gb|ACO04097.1| flagellar basal-body rod protein FlgG [Persephonella marina EX-H1] Length = 266 Score = 192 bits (486), Expect = 5e-47, Method: Composition-based stats. Identities = 54/261 (20%), Positives = 97/261 (37%), Gaps = 26/261 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + L +++N++N +TVGF+ + F +++ D Sbjct: 1 MIRALWTSASGMGAQQTNLDVISNNIANVNTVGFKRSRANFEDLIYQDIKDPGVMSSNET 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP-RGIILTRDGRF 106 Q V GS I T LD A++GD +F +E P G TR G F Sbjct: 61 RVPSGIQIGLGVKLSDVSKIFTQGSLIKTDKPLDIAIQGDGFFKIELPGGGEAYTRAGNF 120 Query: 107 KVTDDGSLVSASGK------YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 ++ ++G +V+ +G V I I +++ V +G ++ L Sbjct: 121 QIDNEGYIVTPNGYRLSPNIQISAPETLVSISISPNGKVYVVRNEGGQQTTEELTDIK-L 179 Query: 161 YSVDMSQGFVRRENSGI-SPNIPPTPLE----DLSGVTVKRGFLEDSNANSMYEMGQMIH 215 Y G + P+E + +GFLE SN N + EM +I Sbjct: 180 YKFINPAGLKAIGENLFKYTEASGEPIEGDPNTDGFGKLAQGFLEASNVNIVEEMVNLIV 239 Query: 216 LTQKFNSITTLIDENEKSMLE 236 + + + I ++ + Sbjct: 240 AQRAYEINSKGIITADEMLRT 260 >gi|325295399|ref|YP_004281913.1| flagellar basal-body rod protein FlgG [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065847|gb|ADY73854.1| flagellar basal-body rod protein FlgG [Desulfurobacterium thermolithotrophum DSM 11699] Length = 266 Score = 192 bits (486), Expect = 5e-47, Method: Composition-based stats. Identities = 53/260 (20%), Positives = 97/260 (37%), Gaps = 26/260 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + A + L ++ N++N +TVGF+ + F +++ D Sbjct: 1 MLRALWTSATGMEAQQTNLDVISHNIANVNTVGFKKSRANFEDLIYQDIRDPGVMSSEEN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP-RGIILTRDGRF 106 Q V GS + T LD A++G +F +E P G TR G F Sbjct: 61 RVPSGIQIGLGVKVSDVSKIFTQGSLMKTDKPLDLAIQGAGFFKIELPGGGEAYTRAGNF 120 Query: 107 KVTDDGSLVSASGK------YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 ++ ++G +V+ G V I I +++ V G + + + T+ L Sbjct: 121 QLNEEGYIVTPEGYKLSPNIQISSPETVVNISISPNGKVYVVRNTGGVQ-TTEEVGTIKL 179 Query: 161 YSVDMSQGFVRRENSGIS-PNIPPTPLE----DLSGVTVKRGFLEDSNANSMYEMGQMIH 215 Y G + + + P+E + +GFLE SN N + EM +I Sbjct: 180 YRFINPAGLKALGGNLLVKTDASGEPVEGDPNTDGFGKLAQGFLEASNVNIVEEMVNLIV 239 Query: 216 LTQKFNSITTLIDENEKSML 235 + + + I ++ + Sbjct: 240 AQRAYEVNSKGITTADEMLR 259 >gi|148266117|ref|YP_001232823.1| flagellar basal body rod protein [Geobacter uraniireducens Rf4] gi|146399617|gb|ABQ28250.1| flagellar basal body rod protein [Geobacter uraniireducens Rf4] Length = 244 Score = 190 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 63/247 (25%), Positives = 107/247 (43%), Gaps = 10/247 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56 M + L+ LA QRL +++N++N +T GF+ +++F V+ KN Sbjct: 1 MNSGLYAALSGSLAAMQRLEVISNNLANANTPGFKGDRLQFESVLANTKNPTLTAGNLTD 60 Query: 57 -SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115 + K + + G TG LD AL+GD +F + +P+G TR G F+ G LV Sbjct: 61 LPVFSGEKFFTNYSAGPLKQTGNTLDVALDGDGFFVVNTPQGKAYTRQGSFQRDASGKLV 120 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 + G I ++ KG + G + T+ + + N Sbjct: 121 TGDGYEVQGRGP-----ITITGGRVDINGKGGVLVDGVSVGTLEVVDFPKPYALEKIGNG 175 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 P P + ++ +VK+GFLEDSN N + EM +MI ++ F+S +I + Sbjct: 176 LFIPADPQVAPQAVTTASVKQGFLEDSNVNVVTEMARMIETSRYFDSCQKVIRSYDDVAA 235 Query: 236 EAIRNIA 242 +A + Sbjct: 236 KAANELG 242 >gi|46578928|ref|YP_009736.1| flagellar basal body rod protein FlgG [Desulfovibrio vulgaris str. Hildenborough] gi|120603471|ref|YP_967871.1| flagellar basal body rod protein FlgG [Desulfovibrio vulgaris DP4] gi|46448340|gb|AAS94995.1| flagellar basal-body rod protein FlgG [Desulfovibrio vulgaris str. Hildenborough] gi|120563700|gb|ABM29444.1| flagellar basal-body rod protein FlgG [Desulfovibrio vulgaris DP4] gi|311232786|gb|ADP85640.1| flagellar basal-body rod protein FlgG [Desulfovibrio vulgaris RCH1] Length = 260 Score = 188 bits (477), Expect = 6e-46, Method: Composition-based stats. Identities = 49/257 (19%), Positives = 95/257 (36%), Gaps = 18/257 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S +A + + ++ N++N +T GF+ + +F +++ Sbjct: 1 MMRSLWTAATGMVAQQLNIDVISHNLANVNTSGFKKSRAEFEDLMYQNMRIAGSATEGDS 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107 Q V + G F ++G LD A+EGD +F + TR G FK Sbjct: 61 RIPVGIQVGMGVRPTAVHKFFSQGDFQNSGNPLDIAIEGDGFFQVLVNGEPRYTRAGAFK 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 + DG++V+A+G + + + + A + LY+ Sbjct: 121 LNQDGTVVTANGYVLQPEFTVPAETKNVVVTEAGHIAALDANGQELAAADIPLYTFINPA 180 Query: 168 GFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222 G + P+ + + T+ +GFLE SN + EM MI + + Sbjct: 181 GLDAIGRNLYVPSEASGEAVEGVPGEDNVGTLAQGFLEMSNVEVVDEMVNMIVGQRAYEM 240 Query: 223 ITTLIDENEKSMLEAIR 239 + I +++ + A+ Sbjct: 241 NSKAISTSDQMLQTAVN 257 >gi|152990359|ref|YP_001356081.1| flagellar basal-body rod protein FlgG [Nitratiruptor sp. SB155-2] gi|151422220|dbj|BAF69724.1| flagellar basal-body rod protein FlgG [Nitratiruptor sp. SB155-2] Length = 266 Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 51/264 (19%), Positives = 94/264 (35%), Gaps = 26/264 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + L V++N++N +T GF+ + F +++ D Sbjct: 1 MIRALWTSASGMQAQQTNLDVVSNNIANVNTTGFKQSRANFEDLIYQNIKDPGVENGNGN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP-RGIILTRDGRF 106 Q V GS T +LD A++G +F +E P G TR G F Sbjct: 61 RLPTGIQIGLGVRVADVAKIFSQGSLKHTERDLDVAIQGKGFFKIELPGGGEAYTRAGNF 120 Query: 107 KVTDDGSLVSASGKYP------VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 ++ ++G+LV+ G V I I ++ V +G + + + L Sbjct: 121 QIDNEGNLVTDQGYKVLPNIQINAPETLVGISISPNGKVVAVRSEGVGQ-TTEELGQLKL 179 Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIH 215 Y G + + + + +GFLE SN N + EM +I Sbjct: 180 YRFINPAGLKAIGGNLFVQSEASAEPIEGDPDTNGFGKLSQGFLEMSNVNIVEEMVNLIV 239 Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239 + + + I ++ + Sbjct: 240 AQRAYEMNSKGITTADEMLRTVAT 263 >gi|289548898|ref|YP_003473886.1| flagellar basal-body rod protein FlgG [Thermocrinis albus DSM 14484] gi|289182515|gb|ADC89759.1| flagellar basal-body rod protein FlgG [Thermocrinis albus DSM 14484] Length = 262 Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 52/259 (20%), Positives = 94/259 (36%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + L ++ NM+N +TVGF+ ++ F +++ D Sbjct: 1 MFRALWTSASGMSAQQTNLDVISHNMANVNTVGFKKMRPTFQDLLYQTVRDPGAPTSPTT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q V Y G+ TG +LD A++GD +F + P I TR+G+F Sbjct: 61 RAPSGFQIGLGVYISDTYGIFTQGNLFQTGNQLDLAIQGDGFFKVVLPDGTIAYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQKGKVIATMGLYSVDM 165 ++ DG +V+ G ++ I + + I + L Sbjct: 121 RLDADGRIVNPDGYPLDPEITVPADAISVSIGPDGTVSVLRQGATTVEEIGRIELAKFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G R N+ + T+ +G+LE SN N + EM +I + F Sbjct: 181 PAGLRRIGNNLFIQTDASGEPIVDNPGNQGLGTLLQGYLESSNVNIVEEMVNLIIAQRAF 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + I + + + Sbjct: 241 EFNSKGIMAADDMLGQVAN 259 >gi|254478136|ref|ZP_05091519.1| conserved domain protein [Carboxydibrachium pacificum DSM 12653] gi|214035998|gb|EEB76689.1| conserved domain protein [Carboxydibrachium pacificum DSM 12653] Length = 251 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 55/253 (21%), Positives = 107/253 (42%), Gaps = 15/253 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG-----------AIK 49 M + LA + + +A+N++N +TVG++ V S Sbjct: 1 MIRGLYTAASGMLAQTKVMDVLANNLANVNTVGYKKDVVVLSSFPNFETIREGGDNVPPD 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109 + + V + E G + T +LDFA++G+ +F + +P+G TRDG F + Sbjct: 61 RKVGRIEYGVLIDTFHTVFEEGPLMETTGKLDFAIDGNGFFVVNTPQGERYTRDGAFTMN 120 Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169 DG LV+ G + I +V E G I G+++ + + D Sbjct: 121 ADGYLVTKDGYLVL----GENGPIRLSQGDVSVDENGNIINNGQLVDRLRIVDFDNYDAL 176 Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 ++ ++ + + +K+GFLE SN NS+ EM MI + + + S ++ Sbjct: 177 KKQGDNLFYLDNAVNTQIIPATGRIKQGFLEGSNVNSVKEMVNMISVMRNYESNQKVVTA 236 Query: 230 NEKSMLEAIRNIA 242 ++++ +A+ + Sbjct: 237 FDETLGKAVNEVG 249 >gi|218778846|ref|YP_002430164.1| flagellar basal body rod protein FlgG [Desulfatibacillum alkenivorans AK-01] gi|218760230|gb|ACL02696.1| Flagellar basal-body rod protein FlgG [Desulfatibacillum alkenivorans AK-01] Length = 260 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 45/257 (17%), Positives = 88/257 (34%), Gaps = 18/257 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M A + + V++N++N +T F+ + F +++ Sbjct: 1 MLRGLWTAATGMEAQQLNIDVVSNNLANINTTAFKRSRPDFQDLMYQTIRVAGATTTGGT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107 Q G + TG +LD+A+EG+ +F + S + TR G FK Sbjct: 61 QLPTGLQVGMGSKPTGVQKIFVQGDYSQTGNDLDWAIEGNGFFKVLSNNEEVYTRAGSFK 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 + +G + +A+G+ + A + + + + + LY Sbjct: 121 IDSEGYITTAAGERLQPEFAVPADAVLISVDSGGKLTAFGPANEEVATYDITLYDFANPA 180 Query: 168 GFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222 G + + T+ +GFLE SN N + EM MI + + + Sbjct: 181 GLYSMGRNLYKTTEASGEEVEGTPGDEGFGTISQGFLEMSNVNVVEEMVTMIIAQRAYEA 240 Query: 223 ITTLIDENEKSMLEAIR 239 + I + + A Sbjct: 241 NSKAIQTADSMLQIANN 257 >gi|302343757|ref|YP_003808286.1| flagellar basal-body rod protein FlgG [Desulfarculus baarsii DSM 2075] gi|301640370|gb|ADK85692.1| flagellar basal-body rod protein FlgG [Desulfarculus baarsii DSM 2075] Length = 260 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 47/255 (18%), Positives = 93/255 (36%), Gaps = 18/255 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S A + L +++N++N +T GF+ + F +++ Sbjct: 1 MMRSLYTAATGMTAQQLNLDVISNNLANVNTTGFKKSRADFEDLMYQTLRQPGAQQAGGQ 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107 Q V G + T +LD A+EG +F ++ + TRDG FK Sbjct: 61 MIPTGKQVGMGVRPVAIQKIWSQGDYQQTDNQLDVAIEGQGFFRIQKDNEDVYTRDGSFK 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 + ++ +V ++G V M + + + + + LY+ Sbjct: 121 LNNNRDIVDSNGNLLVPQMTVPENATSVVIDPNGLVTALTADDEAVELGRIQLYTFPNPS 180 Query: 168 GFVRRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222 G + + + P T+ +GFLE SN + + EM MI + + + Sbjct: 181 GLMAIGRNYFRESPASGVAVPGDPGADQFGTLAQGFLEMSNVSVVDEMVNMIVAQRAYEA 240 Query: 223 ITTLIDENEKSMLEA 237 + I +++ + A Sbjct: 241 NSKSITTSDQMLQTA 255 >gi|302390533|ref|YP_003826354.1| flagellar basal-body rod protein FlgG [Thermosediminibacter oceani DSM 16646] gi|302201161|gb|ADL08731.1| flagellar basal-body rod protein FlgG [Thermosediminibacter oceani DSM 16646] Length = 268 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 63/269 (23%), Positives = 110/269 (40%), Gaps = 29/269 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + LA + + +++N++N +T G++ +V+F +++ D Sbjct: 1 MMRALWSASSGMLAQQLNVDVISNNLANVNTTGYKKSRVEFKDLLYETLRRPDVFQPGQG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFK 107 Q V G+ TG D A+EG+ +F +E P G TRDG FK Sbjct: 61 NPVGLQVGHGVRPASTTRFFTEGNLQQTGNTFDLAIEGEGFFVVERPDGSRAFTRDGSFK 120 Query: 108 VTDDG---SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG-----KVIATMG 159 V+ DG LV++ G Y LD I IP+ N+ G I+ + + I T+ Sbjct: 121 VSIDGDDRYLVTSEGYYV-LDTDEDYISIPEDLTDINISANGTITGRDADGNIEEIGTIA 179 Query: 160 LYSVDMSQGFVRRENSGISPNIPPTPLE------DLSGVTVKRGFLEDSNANSMYEMGQM 213 L +G + N+ + + T+ +GFLE SN + EM + Sbjct: 180 LARFLNPEGLLAVGNNLFEQTAASGEYQLKEDPNEPGFGTILQGFLEMSNVQVVDEMVNL 239 Query: 214 IHLTQKFNSITTLIDENEKSMLEAIRNIA 242 I + + T I ++ + +A N+ Sbjct: 240 IVAQRAYEINTKAIQTADEMLGQA-NNLR 267 >gi|188997557|ref|YP_001931808.1| flagellar basal-body rod protein FlgG [Sulfurihydrogenibium sp. YO3AOP1] gi|188932624|gb|ACD67254.1| flagellar basal-body rod protein FlgG [Sulfurihydrogenibium sp. YO3AOP1] Length = 266 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 52/268 (19%), Positives = 99/268 (36%), Gaps = 27/268 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + L ++ N++N +TVGF+ + F +++ D Sbjct: 1 MLRALWTSASGMEAQQTNLDVISHNIANVNTVGFKRSRANFEDLIYQDVRDPGVLSSTQN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q V GS + T LD A++G+ +F +E P TR G F Sbjct: 61 RVPAGIQIGLGVKVSDVAKMFSQGSLMKTDNPLDVAIQGEGFFKIEMPDGSEAFTRAGNF 120 Query: 107 KVTDDGSLVSASGK------YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 ++ ++G +V+ G + I I ++ V G Q + + + L Sbjct: 121 QIDNEGYIVNPEGYRLSPNIQISAPETVLNISISPNGKVIVVRNSGG-QQTTEEVGNIKL 179 Query: 161 YSVDMSQGFVRRENSGI-SPNIPPTPLE----DLSGVTVKRGFLEDSNANSMYEMGQMIH 215 Y G + P+E + + +GFLE SN N + EM +I Sbjct: 180 YKFINPAGLKAIGGNLFKYTEASGQPIEGDPNTDAFGKLTQGFLEMSNVNIVEEMVNLIV 239 Query: 216 LTQKFNSITTLIDENEKSMLEAIRNIAS 243 + + + I ++ + + + + S Sbjct: 240 AQRAYEVNSKGIITADEML-KTVSTLKS 266 >gi|94987183|ref|YP_595116.1| flagellar basal body rod protein FlgG [Lawsonia intracellularis PHE/MN1-00] gi|94731432|emb|CAJ54795.1| Flagellar basal body L-ring protein [Lawsonia intracellularis PHE/MN1-00] Length = 261 Score = 186 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 53/257 (20%), Positives = 100/257 (38%), Gaps = 18/257 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S +A + + +++N++NT+T GF+ + +F +++ Sbjct: 1 MMRSLWTAATGMVAQQLNIDVISNNLANTNTSGFKKSRAEFEDLMYQTMKIAGSATDGDN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107 Q V + G F +TG LD A+EG+ +F + ++ TR G FK Sbjct: 61 RIPVGIQVGMGVRPTAVHKFFTQGDFQNTGNPLDMAIEGEGFFQVLVGDQLMYTRAGAFK 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 + DG+LV+A+G + P + + + + LYS Sbjct: 121 LNQDGTLVTANGYPLQPEFTVPPDAKSVAISERGRITALDANGQEIAAGEIPLYSFVNPA 180 Query: 168 GFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222 G + + P + + T+ +GFLE SN + EM QMI + + Sbjct: 181 GLDAKGRNLYIPTEASGEAVEGVPGEENLGTIAQGFLEMSNVEVVDEMVQMIVGQRAYEM 240 Query: 223 ITTLIDENEKSMLEAIR 239 + I ++ + A++ Sbjct: 241 NSKAIQTSDNMLQTAVQ 257 >gi|15606190|ref|NP_213567.1| flagellar hook basal-body protein FlgG [Aquifex aeolicus VF5] gi|2983377|gb|AAC06963.1| flagellar hook basal-body protein FlgG [Aquifex aeolicus VF5] Length = 262 Score = 186 bits (471), Expect = 3e-45, Method: Composition-based stats. Identities = 47/259 (18%), Positives = 96/259 (37%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + L ++ NM+N +TVG++ ++ F +++ + Sbjct: 1 MFRALWTSASGMTAQQTNLDVISHNMANVNTVGYKKMRATFQDLLYQTVEEPGAPTSPTT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q Y G+ T +LD A++GD +F + P I TR+G+F Sbjct: 61 RSPSGFQIGLGTYVSDTYGIFTQGNLTKTDNQLDIAIQGDGFFKIVLPDGTIAYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQKGKVIATMGLYSVDM 165 ++ +G +V++ G ++ I + + + + + L Sbjct: 121 RLDSEGRIVNSDGYPLDPEITIPADAISVSIAADGTVSVLRQGATEVEEVGRIELAKFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G R N+ + T+ +G+LE SN N + EM +I + + Sbjct: 181 PAGLRRIGNNLYIQTTASGEPIIDNPGNQGLGTLLQGYLESSNVNIVEEMVNLIIAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 T I ++ + +A Sbjct: 241 EFNTKGIQAADEMLSQAAN 259 >gi|20806698|ref|NP_621869.1| flagellar basal body and hook proteins [Thermoanaerobacter tengcongensis MB4] gi|20515152|gb|AAM23473.1| Flagellar basal body and hook proteins [Thermoanaerobacter tengcongensis MB4] Length = 251 Score = 186 bits (471), Expect = 3e-45, Method: Composition-based stats. Identities = 55/253 (21%), Positives = 107/253 (42%), Gaps = 15/253 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG-----------AIK 49 M + LA + + +A+N++N +TVG++ V S Sbjct: 1 MIRGLYTAASGMLAQTKVMDVLANNLANANTVGYKKDIVVLSSFPNLETIREGGDNVPPD 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109 + + V + E G + T +LDFA++G+ +F + +P+G TRDG F + Sbjct: 61 RKVGRIEYGVLIDTFHTVFEEGPLMETTGKLDFAIDGNGFFVVNTPQGERYTRDGAFTMN 120 Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169 DG LV+ G + I +V E G I G+++ + + D Sbjct: 121 ADGYLVTKDGYIVL----GENGPIRLSQGDVSVDENGNIINNGQLVDRLRIVDFDNYDAL 176 Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 ++ ++ + + +K+GFLE SN NS+ EM MI + + + S ++ Sbjct: 177 RKQGDNLFYLDNAVNTQIIPATGRIKQGFLEGSNVNSVKEMVNMISVMRNYESNQKVVTA 236 Query: 230 NEKSMLEAIRNIA 242 ++++ +A+ + Sbjct: 237 FDETLGKAVNEVG 249 >gi|242278484|ref|YP_002990613.1| flagellar basal body rod protein FlgG [Desulfovibrio salexigens DSM 2638] gi|242121378|gb|ACS79074.1| flagellar basal-body rod protein FlgG [Desulfovibrio salexigens DSM 2638] Length = 260 Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats. Identities = 49/257 (19%), Positives = 94/257 (36%), Gaps = 18/257 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S +A + + +++N++N +T GF+ +V+F +++ Sbjct: 1 MMRSLWTAATGMVAQQTHIDVLSNNLANVNTQGFKKSRVEFEDLMYQTMRIAGSETEGGN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107 Q V + GSF STG LD A+EG+ +F ++ TR G FK Sbjct: 61 RLPTGMQIGMGVKEVSIHKFFSQGSFESTGNPLDIAIEGNGFFLVDRNGEDAYTRSGAFK 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 + DG LV+++G + + + + A + +Y Sbjct: 121 LDSDGRLVTSNGYPLQPEFTVPAEAVNVVVSEDGHIAALDKNGTELSSADITIYDFINEA 180 Query: 168 GFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222 G + + T+ +G+LE SN + EM +I + + + Sbjct: 181 GLNAVGKNLYVETEASGAAIQGTPGEDNFGTLAQGYLEGSNVELVDEMVGLIVGQRAYET 240 Query: 223 ITTLIDENEKSMLEAIR 239 + I ++ + AI Sbjct: 241 NSKAITTSDSMLQTAIN 257 >gi|237755437|ref|ZP_04584062.1| flagellar basal-body rod protein FlgG [Sulfurihydrogenibium yellowstonense SS-5] gi|237692401|gb|EEP61384.1| flagellar basal-body rod protein FlgG [Sulfurihydrogenibium yellowstonense SS-5] Length = 266 Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats. Identities = 52/268 (19%), Positives = 98/268 (36%), Gaps = 27/268 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + L ++ N++N +TVGF+ + F +++ D Sbjct: 1 MLRALWTSASGMEAQQTNLDVISHNIANVNTVGFKRSRANFEDLIYQDVRDPGVLSSTQN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q V GS + T LD A++G+ +F +E P TR G F Sbjct: 61 RVPAGIQIGLGVKVSDVAKMFSQGSLMKTDNPLDVAIQGEGFFKIEMPDGSEAFTRAGNF 120 Query: 107 KVTDDGSLVSASGK------YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 ++ ++G +V+ G + I I ++ V G Q + + + L Sbjct: 121 QLDNEGYIVNPEGYRLSPNIQISAPETVLNISISPNGKVIVVRNSGG-QQTTEEVGNIKL 179 Query: 161 YSVDMSQGFVRRENSGI-SPNIPPTPLE----DLSGVTVKRGFLEDSNANSMYEMGQMIH 215 Y G + P+E + + +GFLE SN N + EM +I Sbjct: 180 YKFINPAGLKAIGGNLFKYTEASGQPIEGDPNTDAFGKLTQGFLEMSNVNIVEEMVNLIV 239 Query: 216 LTQKFNSITTLIDENEKSMLEAIRNIAS 243 + + + I ++ + + + S Sbjct: 240 AQRAYEVNSKGIITADEML-RTVSTLKS 266 >gi|222053731|ref|YP_002536093.1| flagellar basal-body rod protein FlgF [Geobacter sp. FRC-32] gi|221563020|gb|ACM18992.1| flagellar basal-body rod protein FlgF [Geobacter sp. FRC-32] Length = 244 Score = 184 bits (467), Expect = 7e-45, Method: Composition-based stats. Identities = 59/247 (23%), Positives = 105/247 (42%), Gaps = 10/247 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-----DQK 55 M + L+ LA +RL +++N++N +T GF+ +++F V+ + K+ Sbjct: 1 MNSGLYAALSGNLAAMRRLDVISNNLANANTAGFKGDRLQFESVLASSKSQSQAAASPND 60 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115 +S + G TG LD AL+GD +F + +P+G TR G F++ G LV Sbjct: 61 SPVFSSEIFFTDYSPGPLKQTGNTLDVALDGDGFFVVNTPQGRAYTRQGNFRMDSAGRLV 120 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 ++ G I ++ KG I G T+ + + Sbjct: 121 TSEGYEVQGGGP-----ITVNGGRVDIDAKGAILVDGTPAGTLDIVDFQKPYALQKLGEG 175 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 P P +++ TV++G LE SN N + EM +MI T+ F S ++ + Sbjct: 176 LFIPANPQETPVNVTTTTVQQGALEGSNVNVVAEMVRMIETTRYFESCQKVVRSYDDITG 235 Query: 236 EAIRNIA 242 +A ++ Sbjct: 236 KAANDLG 242 >gi|121534936|ref|ZP_01666755.1| flagellar basal-body rod protein FlgG [Thermosinus carboxydivorans Nor1] gi|121306535|gb|EAX47458.1| flagellar basal-body rod protein FlgG [Thermosinus carboxydivorans Nor1] Length = 262 Score = 184 bits (467), Expect = 8e-45, Method: Composition-based stats. Identities = 45/259 (17%), Positives = 84/259 (32%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + +A + + +++N++N +T GF+ + F +++ Sbjct: 1 MMRALWTAGSGMVAQQANVDVISNNLANVNTTGFKKSRTDFQDLMYQTIRQAGAATGADT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q V G+F TG LD A+EGD +F + P G TRDG F Sbjct: 61 QLPTGIQIGHGVRQVATQKIYTQGNFQQTGNPLDLAIEGDGFFQITLPDGTLAYTRDGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 K G +V++ G + V K + + + + Sbjct: 121 KKDAQGRIVTSEGYPLEPQIIIPENATELLISADGRVTAKIPGQTDPQDLGQIQIVRFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + T+ + +LE SN + EM MI + + Sbjct: 181 PAGLDSIGRNLLKETAASGAPVVLNPGTDGAGTLVQQYLEMSNVQVVEEMVNMIVAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 I + + + Sbjct: 241 EINAKAITTADDMLGQVAN 259 >gi|302392939|ref|YP_003828759.1| flagellar basal-body rod protein FlgG [Acetohalobium arabaticum DSM 5501] gi|302205016|gb|ADL13694.1| flagellar basal-body rod protein FlgG [Acetohalobium arabaticum DSM 5501] Length = 262 Score = 184 bits (467), Expect = 8e-45, Method: Composition-based stats. Identities = 51/259 (19%), Positives = 93/259 (35%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S A + + T+++N++N +T GF+ +V F +++ + Sbjct: 1 MIRSLWTAATGMKAQQLNIDTISNNLANVNTNGFKKSRVNFQDLMYQSLREAGTPNNQGS 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 V GSF TG LD A+EGD +F + P G + TRDG F Sbjct: 61 QVPAGIEVGHGVRPAATQKLFAQGSFQQTGNPLDMAIEGDGFFQVVRPNGQVGYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 K +G +V++ G D+ V K +++ + + L Sbjct: 121 KRDSNGRIVTSDGYPLASDITIPEDTTDVSITAEGRVMVKQPGNEEVTEVGQIELSRFSN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + T+ +G+LE N + EM MI + + Sbjct: 181 PAGLKSIGRNLFAETPASGGPTVGVPAEDGFGTISQGYLEKGNVKVVEEMTNMIAAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + I +++ + +A Sbjct: 241 EVNSKAIKASDQMLQQANN 259 >gi|332981440|ref|YP_004462881.1| flagellar hook-basal body protein [Mahella australiensis 50-1 BON] gi|332699118|gb|AEE96059.1| flagellar hook-basal body protein [Mahella australiensis 50-1 BON] Length = 265 Score = 184 bits (467), Expect = 9e-45, Method: Composition-based stats. Identities = 56/262 (21%), Positives = 96/262 (36%), Gaps = 23/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49 M S G++ A + R+ + +N++N +TVGF++ +V F +V Sbjct: 1 MMRSMFSGVSGLRAHQTRMDVIGNNIANVNTVGFKSSRVTFQDVFNQTIKTGSAPNVLGG 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109 + Q A G + G T LD A+ GD +F + TR G F + Sbjct: 61 TNPQQIGLGAAVGAIDVLHTPGGIERTDNPLDLAINGDGFFVVNDGTADYYTRAGNFHLD 120 Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG-----KVIATMGLYSVD 164 DG+LV+ G Y I P + + G+IS + +GL Sbjct: 121 ADGNLVTPDGMYVQTAGGGNIIIDPTLYVSIVIDKTGQISGIQADGTVDTLDIVGLAKFV 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-------SGVTVKRGFLEDSNANSMYEMGQMIHLT 217 G + + I P + G LE SN + E+ MI Sbjct: 181 NPGGLEKIGQNMYRETISSGPPATGIVQPGQDGTGYLTPGALEMSNVDLSRELTDMIITQ 240 Query: 218 QKFNSITTLIDENEKSMLEAIR 239 + F + + +I +++ + E + Sbjct: 241 RGFQANSRVITTSDEMLQELVN 262 >gi|311068150|ref|YP_003973073.1| flagellar basal body rod protein FlgG [Bacillus atrophaeus 1942] gi|310868667|gb|ADP32142.1| flagellar basal body rod protein FlgG [Bacillus atrophaeus 1942] Length = 264 Score = 184 bits (467), Expect = 9e-45, Method: Composition-based stats. Identities = 62/262 (23%), Positives = 109/262 (41%), Gaps = 24/262 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G++ + +L + +N++N +TVGF+ +V F ++V Sbjct: 1 MLRSLYSGISGMKNFQTKLDVIGNNIANVNTVGFKKSRVTFKDMVSQTIAGGSAAGAQVG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 + Q ++G + STG LD A++GD +F +++ G + TR G F + Sbjct: 61 GTNSKQIGLGSSTGTIDTIHSTSATQSTGRTLDLAIDGDGYFQIDNGEGTVYTRAGNFYL 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-----IATMGLYSV 163 ++G LV+ G Y I IP+ + F +G G +S G +G+ + Sbjct: 121 DNEGKLVTGDGYYVQKLG-GGEITIPKDAQNFTIGPDGSVSIVGAGGEKIDGGQIGIVTF 179 Query: 164 DMSQGFVRRENSGI------SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217 S G + NS D +K GFLE SN + E +MI Sbjct: 180 ANSDGLDKIGNSLYRESSNSGTPSAANIPGDGGTGELKSGFLEMSNVDLTDEFTEMIVAQ 239 Query: 218 QKFNSITTLIDENEKSMLEAIR 239 + F S + +I +++ + E + Sbjct: 240 RGFQSNSKIITTSDEILQELVN 261 >gi|303328380|ref|ZP_07358818.1| flagellar basal-body rod protein FlgG [Desulfovibrio sp. 3_1_syn3] gi|302861710|gb|EFL84646.1| flagellar basal-body rod protein FlgG [Desulfovibrio sp. 3_1_syn3] Length = 261 Score = 184 bits (467), Expect = 9e-45, Method: Composition-based stats. Identities = 53/257 (20%), Positives = 101/257 (39%), Gaps = 18/257 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G +A + + +++N++N +T GF+ + +F +++ Sbjct: 1 MMRSLYTGATGMVAQQLNIDVISNNLANVNTTGFKKSRAEFEDLMYQTMKIAGSITEGDN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107 Q V + G F +TG LD A+EGD +F ++ ++ TR G FK Sbjct: 61 RLPVGIQVGMGVRPTAVHKFFTQGDFQNTGNALDVAVEGDGFFQVDVNGELMYTRAGSFK 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 + DG++V+A+G + A + + A + LY+ Sbjct: 121 LNQDGTVVTANGYILQPEFAVPAETKNISISSTGHIAALDSEGQEIAGAEIPLYTFINPA 180 Query: 168 GFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222 G R + +P + + T+ +GFLE SN + EM MI + + Sbjct: 181 GLDARGRNLYTPTEASGAETEGVPGTDNVGTLAQGFLEMSNVEVVDEMVNMIVGQRAYEV 240 Query: 223 ITTLIDENEKSMLEAIR 239 + I ++ + A++ Sbjct: 241 NSKAIQTSDSMLGMAVQ 257 >gi|220932494|ref|YP_002509402.1| flagellar basal-body rod protein FlgG [Halothermothrix orenii H 168] gi|219993804|gb|ACL70407.1| flagellar basal-body rod protein FlgG [Halothermothrix orenii H 168] Length = 262 Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 87/259 (33%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + A + + T+++N++N +T GF+ +V F +++ Sbjct: 1 MIGALWTAATGMDAQQTNIDTISNNLANVNTTGFKKTRVNFQDLMYQHIRQPGTPNSQGG 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 V G+ +T LD +EGD + + P G TRDG Sbjct: 61 QIPVGIEVGHGVKVSATQKIFSPGNIQNTDNPLDILIEGDGFLQVLLPDGTLAYTRDGSL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 K G +V++ G ++ + + S + + I + L Sbjct: 121 KRDSMGRIVTSDGYPIQPEIYIPEDASSISITSDGTIAVEINGSNQPQQIGQIELARFSN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + P + T+ +GFLE SN + EM MI + + Sbjct: 181 PAGLNSIGRNLFKPTVASGDPIVGTPGSPGFGTIAQGFLEMSNVKVVEEMVNMIAAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + I ++ + A + Sbjct: 241 EINSKAIQAADEMLRTASQ 259 >gi|297616912|ref|YP_003702071.1| flagellar basal-body rod protein FlgG [Syntrophothermus lipocalidus DSM 12680] gi|297144749|gb|ADI01506.1| flagellar basal-body rod protein FlgG [Syntrophothermus lipocalidus DSM 12680] Length = 261 Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 49/258 (18%), Positives = 93/258 (36%), Gaps = 19/258 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + A + + +A N++N +T G++ +V+F +++ + Sbjct: 1 MLRALYTSSTGMFAQQLNIDNIAHNIANVNTTGYKKSRVEFQDLIYQMLRRPVANDTTVQ 60 Query: 56 ------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI--ILTRDGRFK 107 V G+ T LD A++G A+F ++SP + TRDG FK Sbjct: 61 PSGLWVGLGVKPSATQTIFSQGNLTPTDNPLDVAIQGQAFFRVQSPTNEEYLYTRDGSFK 120 Query: 108 VTDDGSLVSASGKYPVL-DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 + +G+LV+ G Y V D V K + + L Sbjct: 121 LDSEGNLVTTDGYYVVGVDTIDPEGYDVTIAPDGTVTYKMPGQDEPVEAGQVELAKFTNP 180 Query: 167 QGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221 G + + P E + V++ G+LE +N + EM +I + + Sbjct: 181 AGLEKIGGNLYRPTASSGEAIDWDPEADTTVSLHAGYLEAANIQIVEEMVNLITAQRAYE 240 Query: 222 SITTLIDENEKSMLEAIR 239 + +I ++ + A Sbjct: 241 INSKVIQSADEMLGMAAN 258 >gi|119953549|ref|YP_945759.1| flagellar basal body rod protein FlgG [Borrelia turicatae 91E135] gi|119862320|gb|AAX18088.1| flagellar basal-body rod protein FlgG [Borrelia turicatae 91E135] Length = 264 Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 51/263 (19%), Positives = 97/263 (36%), Gaps = 23/263 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + + A + + T+A+N+SN +T GF+ I+ +F +++ + Sbjct: 1 MMRALWTAASGMKAQQYNVDTIANNLSNVNTTGFKKIRAEFEDLIYQTQKRAGTPATEDT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 + E G+ +T + D A+EGD ++ + P G TRDG F Sbjct: 61 VSPLGNQVGHGTKVSATHRIFEQGNLQATNLKTDVAIEGDGFYKILLPDGTYGYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNV---GEKGEISQKGKVIATMGLYSV 163 K+ +G LV++ G + +++ I I K + S + M + Sbjct: 121 KIDANGDLVTSQGYKLLPEISFPEEYIKDSIIISQEGIISVKVDGSPDPIELGQMEIARF 180 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 G N+ I +++G LE SN + EM MI + Sbjct: 181 VNPAGLNAIGNNIFKETIGSGEEISGTPGSSGMGRLRQGILEMSNVSIAEEMVTMIVAQR 240 Query: 219 KFNSITTLIDENEKSMLEAIRNI 241 + + I ++ + N+ Sbjct: 241 AYEINSKAIQTSDNMLG-IANNL 262 >gi|297570291|ref|YP_003691635.1| flagellar basal-body rod protein FlgG [Desulfurivibrio alkaliphilus AHT2] gi|296926206|gb|ADH87016.1| flagellar basal-body rod protein FlgG [Desulfurivibrio alkaliphilus AHT2] Length = 260 Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 93/259 (35%), Gaps = 19/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + G + +L T+++N++N +T GF+ +V+F ++ + Sbjct: 1 MIRALYSGTTGMRGQQLQLDTISNNLANVNTAGFKKSRVQFEDLYYQEMRAVGVETVDGG 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107 Q V + GS TG +LD A+EG +F + TR G F Sbjct: 61 QVPSGIQVGLGVIATSTQKLFTQGSIHETGNDLDLAVEGRGFFQVIRDGEEFYTRSGNFT 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 DG +V+ +G + A + + + +Q+ + L++ Sbjct: 121 RDADGFIVTQNGDRLQPEFAIPADTVTLSVGTDGLIQAKNAAQEIIAEGQLTLHNFINPG 180 Query: 168 GFVRRENSGISPN-IPPTPLEDLS----GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222 G + P P+E + + F+E SN + E+ +I + F Sbjct: 181 GLRAEGGNLFRPTEASGDPIESDPGTDGAGVILQNFIEVSNVDVTEELVNLIITQRAFEM 240 Query: 223 ITTLIDENEKSMLEAIRNI 241 + + ++ + E + Sbjct: 241 NSKSVQTADQLL-EVANTL 258 >gi|163782718|ref|ZP_02177714.1| flagellar hook basal-body protein FlgG [Hydrogenivirga sp. 128-5-R1-1] gi|159881839|gb|EDP75347.1| flagellar hook basal-body protein FlgG [Hydrogenivirga sp. 128-5-R1-1] Length = 262 Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats. Identities = 49/259 (18%), Positives = 97/259 (37%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + L ++ NM+N +T+GF+ ++ F +++ + Sbjct: 1 MFRALWTSASGMTAQQTNLDVISHNMANVNTIGFKKMRPTFQDLIYQTVREPGAPTSPTT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q Y G+ TG LD A++GD +F + P I TR+G+F Sbjct: 61 RSPSGFQIGLGTYIADTYGIFTQGNINQTGNTLDLAIQGDGFFKVVLPDGTIAYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQKGKVIATMGLYSVDM 165 ++ DG +V++ G +++ P + + + + + L Sbjct: 121 RLDRDGRIVNSDGYPLDPEISIPPDALSIGIAADGTVTVLRQGATSVEEVGRIELAKFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G R N+ + T+ +G+LE SN N + EM +I + + Sbjct: 181 PAGLRRVGNNLYIQTDASGEPLIDNPGNQGIGTLLQGYLESSNVNIVEEMVNLIIAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 T I ++ + +A Sbjct: 241 EFNTKGITAADEMLSQAAN 259 >gi|297618421|ref|YP_003703580.1| flagellar basal-body rod protein FlgF [Syntrophothermus lipocalidus DSM 12680] gi|297146258|gb|ADI03015.1| flagellar basal-body rod protein FlgF [Syntrophothermus lipocalidus DSM 12680] Length = 256 Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats. Identities = 54/261 (20%), Positives = 111/261 (42%), Gaps = 24/261 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKND------ 51 M + L + +A+N++N T GF+ F +++ + Sbjct: 1 MIRGLYTACSGMLLQLAKQDVIANNLANASTPGFKKDLAVCTAFPDMMINRLGEVKVVAG 60 Query: 52 ---------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTR 102 I + + A G+ T LD A+ GD +F +++P+G TR Sbjct: 61 KEEPIPPVAIGRLGTGAAIQTISTDFSAGAVQKTDNPLDLAIAGDGFFVIQTPQGEKYTR 120 Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162 +G F++ DDG L +A G + I D+ F + EKG + +V+ T+ + Sbjct: 121 NGSFRIGDDGILTTAQGYPVL----GRSGPINIGDQTFTIDEKGNLLVGDEVLDTLRVVR 176 Query: 163 VDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222 + + V+ + N TP++ V +G+LE SN ++ EM ++I + + + + Sbjct: 177 FENNSELVKTGDDL-FTNPSGTPVDV-EDGQVIQGYLELSNVVAVKEMVELISVLRAYEA 234 Query: 223 ITTLIDENEKSMLEAIRNIAS 243 ++ +++++ AI + + Sbjct: 235 NQKVVQAHDQTLDAAINRVGA 255 >gi|225849135|ref|YP_002729299.1| flagellar basal-body rod protein FlgG [Sulfurihydrogenibium azorense Az-Fu1] gi|225644492|gb|ACN99542.1| flagellar basal-body rod protein FlgG [Sulfurihydrogenibium azorense Az-Fu1] Length = 266 Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats. Identities = 53/268 (19%), Positives = 97/268 (36%), Gaps = 27/268 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + L ++ N++N +TVGF+ + F +++ D Sbjct: 1 MLRALWTSASGMEAQQTNLDVISHNIANVNTVGFKRSRANFEDLIYQDIRDPGVLSSTQN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q V GS I T LD A++GD +F +E P TR G F Sbjct: 61 RVPAGIQIGLGVKVSDVAKIFSQGSLIKTDNPLDLAIQGDGFFKIEMPDGSEAFTRAGNF 120 Query: 107 KVTDDGSLVSASGK------YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 ++ ++G +V+ G + I + ++ V G Q + + + L Sbjct: 121 QLDNEGYIVNPEGYRLSPNIQISAPETVINISVSPNGKVVVVRNSGG-QQTTEEVGDIKL 179 Query: 161 YSVDMSQGFVRRENSGI-SPNIPPTPLE----DLSGVTVKRGFLEDSNANSMYEMGQMIH 215 Y G + P+E + +GFLE SN N + EM +I Sbjct: 180 YRFMNQAGLKAIGQNLFKYTEASGEPIEGDPNTDGFGKITQGFLEASNVNIVEEMVNLIV 239 Query: 216 LTQKFNSITTLIDENEKSMLEAIRNIAS 243 + + + I ++ + + + S Sbjct: 240 AQRAYEVNSKGIITADEML-RTVSTLKS 266 >gi|289577407|ref|YP_003476034.1| flagellar basal-body rod protein FlgG [Thermoanaerobacter italicus Ab9] gi|289527120|gb|ADD01472.1| flagellar basal-body rod protein FlgG [Thermoanaerobacter italicus Ab9] Length = 266 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 63/266 (23%), Positives = 109/266 (40%), Gaps = 25/266 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + + +A+N++N +T F+ + +F +++ + Sbjct: 1 MMRALWSAASGMTAQQLNVDVIANNLANVNTTAFKRDRAEFKDLIYQTLQRENIYGGQGR 60 Query: 54 ----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKV 108 Q V GS T LD AL+G+ +FA+ P G TRDG FK+ Sbjct: 61 PVNMQVGVGVRPSAIVKDFTEGSLQQTDNPLDLALDGEGFFAVLGPDGTVYYTRDGSFKL 120 Query: 109 TDDGSLVS--ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG-----KVIATMGLY 161 + DG+ + + YPVLD PI + ++ +V G IS K + +AT+G+Y Sbjct: 121 SADGNTLMLVTADGYPVLDDRGNPIVFDRTEKDISVSPLGVISVKNANGTTREVATLGIY 180 Query: 162 SVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + QG + N+ P + V +GFLE SN + EM MI Sbjct: 181 NFVNPQGLLSVGNNLYEPTEASGQPGTRDDFEGRMGKVMQGFLETSNVQVVKEMVDMIAA 240 Query: 217 TQKFNSITTLIDENEKSMLEAIRNIA 242 + + + I ++ + N+ Sbjct: 241 QRAYEINSKAIQAADEMLG-IANNLR 265 >gi|160901817|ref|YP_001567398.1| flagellar basal-body rod protein FlgG [Petrotoga mobilis SJ95] gi|160359461|gb|ABX31075.1| flagellar basal-body rod protein FlgG [Petrotoga mobilis SJ95] Length = 261 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 41/258 (15%), Positives = 88/258 (34%), Gaps = 19/258 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S A +++L +++N++N DT G++ + +F +++ + + Sbjct: 1 MLVSLYNAATGMNAEQRKLDIISNNLANVDTTGYKKQRAEFQDLLYSSVKEAGTPTAQGS 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRF 106 +G+ T D A+ GD +F I TRDG F Sbjct: 61 TLPTGLYVGHGTRLAATTRIFTLGNIEPTDNSTDIAIMGDGFFQVQMQDGSIAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 K+ +G L ++ G + ++ + + + + + Sbjct: 121 KLDANGRLTTSDGLMVIPNIVIPQNSVGINVSPDGIVSVSLGDGTIQNVGNLTTVRFLNP 180 Query: 167 QGFVRRENSGI-SPNIPPTPLE----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221 G N+ P E +++G+LE SN + + EM MI + ++ Sbjct: 181 GGLKPIGNNLYSETPASGNPTEGIPGQDGFGALQQGYLEKSNVDVVKEMVDMIVAQRAYD 240 Query: 222 SITTLIDENEKSMLEAIR 239 + I ++ + Sbjct: 241 INSKTITTADEMLRTVSN 258 >gi|197122909|ref|YP_002134860.1| flagellar basal-body rod protein FlgG [Anaeromyxobacter sp. K] gi|220917701|ref|YP_002493005.1| flagellar basal-body rod protein FlgG [Anaeromyxobacter dehalogenans 2CP-1] gi|196172758|gb|ACG73731.1| flagellar basal-body rod protein FlgG [Anaeromyxobacter sp. K] gi|219955555|gb|ACL65939.1| flagellar basal-body rod protein FlgG [Anaeromyxobacter dehalogenans 2CP-1] Length = 266 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 51/259 (19%), Positives = 102/259 (39%), Gaps = 22/259 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 S A + R+ +A+N++NT T GF+ + +F +++ + + Sbjct: 7 LRSLYTAATGMEAQQLRMDVIANNLANTGTTGFKRQRAEFEDLLSETIHGAEAPDPRGGT 66 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFK 107 Q V +G + G ++TG LD A+EGD +F ++ P + TR G F+ Sbjct: 67 APAALQVGLGVRTGSTVRNFGQGELLTTGNALDLAIEGDGFFRVQRPDGSLAYTRAGNFR 126 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDMS 166 V G LV+A G+ ++ P + V + + + + + L + Sbjct: 127 VDAAGRLVTARGEVVDPEITFPPETTRVTVDADGTVRAQVAGREAPQELGRLELCTFPNP 186 Query: 167 QGFVRRENSGISPNI------PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + P E + T+ +GFLE +N ++ EM MI + + Sbjct: 187 GGLEAAGGNLLLQTAASGEAVDARPGEQGA-GTLAQGFLEGANVKAVEEMIDMIATQRAY 245 Query: 221 NSITTLIDENEKSMLEAIR 239 + ++ ++ + Sbjct: 246 ELNSRVVQTADQMLQRLTS 264 >gi|220934396|ref|YP_002513295.1| flagellar basal-body rod protein FlgG [Thioalkalivibrio sp. HL-EbGR7] gi|219995706|gb|ACL72308.1| flagellar basal-body rod protein FlgG [Thioalkalivibrio sp. HL-EbGR7] Length = 263 Score = 183 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 49/262 (18%), Positives = 94/262 (35%), Gaps = 20/262 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + I A + R+S +++N++N +T GF+ + F +++ + Sbjct: 1 MNKALWIAKTGLDAQQTRMSVISNNLANVNTTGFKKGRAVFQDLIYQTVRQAGAQAAQDT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + V + G+ T LD A+EG +F + P I TRDG F Sbjct: 61 ELPSGLMLGTGVRTVATEKMFTQGNVTQTENALDMAIEGRGFFQILMPDGNIAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 ++ DG LV++ G + + E V + V+ + L Sbjct: 121 QLNSDGQLVTSGGYEVDPGIVIPEGALSVTVAEDGTVSATVAGNVAPIVVGNLQLADFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + +GFLE SN N++ E+ MI + + Sbjct: 181 PAGLQPIGQNLFIETAASGAPQAGNPGLDGRGRLLQGFLESSNVNTVEELVNMIETQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNIA 242 + I ++ + N+ Sbjct: 241 EMNSKAISTADQMLQYVNNNLG 262 >gi|218887604|ref|YP_002436925.1| flagellar basal body rod protein FlgG [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758558|gb|ACL09457.1| flagellar basal-body rod protein FlgG [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 260 Score = 183 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 49/257 (19%), Positives = 94/257 (36%), Gaps = 18/257 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S +A + + +++N++N +T F+ + +F +++ Sbjct: 1 MMRSLWTAATGMVAQQLNIDVISNNLANVNTTSFKKSRAEFEDLMYQNMRIAGAATEGDN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107 Q V + G + +TG LD A+EGD +F ++ TR G FK Sbjct: 61 RIPTGIQVGMGVRPTTVHKFFTQGDYSNTGNSLDLAIEGDGFFLVQVNGEDAYTRAGAFK 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 + DG +V+A+G + + + A + LY+ Sbjct: 121 LNQDGVVVTANGYTLQPEFTVPAETKNITVTENGHISALDSNGAALAEADIPLYTFINPA 180 Query: 168 GFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222 G R + P+ + T+ +GFLE SN + EM MI + + Sbjct: 181 GLEARGRNLYVPSEASGEAVEGVPGENQVGTIAQGFLEMSNVEVVDEMVNMIVGQRAYEM 240 Query: 223 ITTLIDENEKSMLEAIR 239 + I ++ + A++ Sbjct: 241 NSKAIQTSDTMLQTAVQ 257 >gi|297543694|ref|YP_003675996.1| flagellar basal-body rod protein FlgG [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296841469|gb|ADH59985.1| flagellar basal-body rod protein FlgG [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 266 Score = 183 bits (463), Expect = 3e-44, Method: Composition-based stats. Identities = 63/266 (23%), Positives = 107/266 (40%), Gaps = 25/266 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + + +A+N++N +T F+ + +F +++ + Sbjct: 1 MMRALWSAASGMTAQQLNVDVIANNLANVNTTAFKRDRAEFKDLIYQTLQRENIYGGQGR 60 Query: 54 ----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKV 108 Q V GS T LD AL+G+ +FA+ P G TRDG FK+ Sbjct: 61 PVNMQVGVGVRPSAIVKDFTEGSLQQTDNPLDLALDGEGFFAVLGPDGTVYYTRDGSFKL 120 Query: 109 TDDGSLVS--ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK-----VIATMGLY 161 + DG+ + + YPVLD + PI + +V G IS K +AT+G+Y Sbjct: 121 SADGNTLMLVTADGYPVLDDSGNPIVFDSTGKDISVSPMGVISVKNPDGTTQEVATLGIY 180 Query: 162 SVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + QG + N+ P + V +GFLE SN + EM MI Sbjct: 181 NFVNPQGLLSVGNNLYEPTEASGQPGTRDDFEGRMGKVMQGFLETSNVQVVKEMVDMIAA 240 Query: 217 TQKFNSITTLIDENEKSMLEAIRNIA 242 + + + I ++ + N+ Sbjct: 241 QRAYEINSKAIQAADEMLG-IANNLR 265 >gi|187918627|ref|YP_001884192.1| flagellar basal body rod protein FlgG [Borrelia hermsii DAH] gi|119861475|gb|AAX17270.1| flagellar basal-body rod protein FlgG [Borrelia hermsii DAH] Length = 265 Score = 183 bits (463), Expect = 3e-44, Method: Composition-based stats. Identities = 51/263 (19%), Positives = 98/263 (37%), Gaps = 23/263 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + + A + + T+A+N+SN +T GF+ I+ +F +++ + Sbjct: 1 MMRALWTAASGMKAQQYNVDTIANNLSNVNTTGFKKIRAEFEDLIYQTQRRAGTPATEDT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 + E G+ +T D A+EG+ ++ + P G TRDG F Sbjct: 61 VSPLGNQVGHGTKVSATHRIFEQGNLQATNLNTDVAIEGNGFYKILLPDGTYGYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNV---GEKGEISQKGKVIATMGLYSV 163 K+ +G+LV++ G + D++ I I K + S + + M + Sbjct: 121 KIDANGALVTSQGYKLLPDISFPEGYIKDSITISQEGIISVKVDESPEPIELGQMEIVRF 180 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 G N+ I +++G LE SN + EM MI + Sbjct: 181 VNPAGLNAIGNNIFKETIGSGEEISGTPGSDGMGRLRQGILEMSNVSIAEEMVTMIVAQR 240 Query: 219 KFNSITTLIDENEKSMLEAIRNI 241 + + I ++ + N+ Sbjct: 241 AYEINSKAIQTSDNMLG-IANNL 262 >gi|206890777|ref|YP_002249848.1| flagellar basal-body rod protein FlgG [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742715|gb|ACI21772.1| flagellar basal-body rod protein FlgG [Thermodesulfovibrio yellowstonii DSM 11347] Length = 262 Score = 183 bits (463), Expect = 3e-44, Method: Composition-based stats. Identities = 48/258 (18%), Positives = 87/258 (33%), Gaps = 20/258 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S A + L ++ N++N +T GF+ + +F +++ + Sbjct: 1 MLRSLFTASTGMYAQQLNLDVISHNLANVNTTGFKKGRAEFQDLLYQNVINPGAPSDDGT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q V G I+TG +LD A++GD +F + P I TR G F Sbjct: 61 QYPSGIQVGLGVRPVAVAKFFTPGDLINTGNDLDLAIDGDGFFQVTLPDGTIAYTRAGNF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 ++ DG +V+ G + V + I T+ L Sbjct: 121 RIDKDGRIVTNDGYPIEPGITVPADATKITFGADGTVTVLQPGTVAPVQIGTVELARFIN 180 Query: 166 SQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + +GFLE SN N + E+ MI + F Sbjct: 181 PGGLQAIGRNLFLETDASGTPTTGTPGTEGRGKIVQGFLEMSNVNIVEELANMIIAQRAF 240 Query: 221 NSITTLIDENEKSMLEAI 238 + + + +++ + Sbjct: 241 DINSKAVQTSDEMLQTVA 258 >gi|146295641|ref|YP_001179412.1| hypothetical protein Csac_0595 [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145409217|gb|ABP66221.1| protein of unknown function DUF1078 domain protein [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 267 Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats. Identities = 47/266 (17%), Positives = 95/266 (35%), Gaps = 26/266 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + A + + +++N++N +T F+ K +F +++ + D Sbjct: 1 MMRALYSAALGMKAQQTNVDIISNNLANVNTTAFKKDKAEFKDLLYETLSRADVIAGDGK 60 Query: 54 ----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109 Q V S G+ T LD A++G+ +F + +P G TRDG FKV+ Sbjct: 61 PVSLQIGHGVTISAITKSFSEGNLERTENPLDLAIQGEGFFVVSTPNGPRYTRDGSFKVS 120 Query: 110 DDGSL---VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL------ 160 + V++ G + + + + + E G I+ K Sbjct: 121 NVEGQIKLVTSDGYPVLAEGDTEIVLPETAISSITIDETGRITYKDAEGQIQDSGFKIKI 180 Query: 161 YSVDMSQGFVRRENSGISPNIP-----PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIH 215 QG + + + + + + +GFLE SN + EM ++I Sbjct: 181 VRFINPQGLLAEGKNLYNVSAASGDPVSEEEIEGPKSRILQGFLEMSNVQVVDEMVKLII 240 Query: 216 LTQKFNSITTLIDENEKSMLEAIRNI 241 + + + I + + N+ Sbjct: 241 AQRAYEINSKAIQTADDML-SMANNL 265 >gi|86157777|ref|YP_464562.1| flagellar basal-body rod FlgG [Anaeromyxobacter dehalogenans 2CP-C] gi|85774288|gb|ABC81125.1| flagellar basal-body rod FlgG [Anaeromyxobacter dehalogenans 2CP-C] Length = 266 Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats. Identities = 51/259 (19%), Positives = 101/259 (38%), Gaps = 22/259 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 S A + R+ +A+N++NT T GF+ + +F +++ + Sbjct: 7 LRSLYTAATGMEAQQLRMDVIANNLANTGTTGFKRQRAEFEDLLSETVRGAEAPDPRGGT 66 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFK 107 Q V +G + G ++TG LD A+EGD +F ++ P + TR G F+ Sbjct: 67 APAPLQVGLGVRTGSTVRNFGQGELLTTGNALDLAVEGDGFFRVQRPDGSLAYTRAGNFR 126 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDMS 166 V G LV+A G+ ++ P + V + + + + + L + Sbjct: 127 VDAAGRLVTARGEVVDPEITFPPETTRVTVDADGTVRAQVAGREAPQELGRLELCTFPNP 186 Query: 167 QGFVRRENSGISPNI------PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + P E + T+ +GFLE +N ++ EM MI + + Sbjct: 187 GGLEAAGGNLLLQTAASGEAVDARPGEQGA-GTLAQGFLEGANVKAVEEMIDMIATQRAY 245 Query: 221 NSITTLIDENEKSMLEAIR 239 + ++ ++ + Sbjct: 246 ELNSRVVQTADQMLQRLTS 264 >gi|78221651|ref|YP_383398.1| hypothetical protein Gmet_0430 [Geobacter metallireducens GS-15] gi|78192906|gb|ABB30673.1| conserved hypothetical protein [Geobacter metallireducens GS-15] Length = 242 Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats. Identities = 52/247 (21%), Positives = 99/247 (40%), Gaps = 12/247 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV----GAIKNDIDQKI 56 M + L +A +RL +++N++N +T GF+ ++ F ++ + Sbjct: 1 MNSGIYSALTGNVAAMKRLDVLSNNLANVNTPGFKKDRMTFESMLQTVGAQPRPGGGTDA 60 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLV 115 A + GS TG D A++GD +FA+ + G TR G F++ G LV Sbjct: 61 PVFAETTFFTDYSPGSVKQTGNPFDLAIDGDGFFAVTTADGQRAYTRQGNFRLDSTGRLV 120 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 +A G + ++ + KGE+ G + + + + Sbjct: 121 TADGAQVAGGVVIAGGKVD-------INGKGEVLVDGSQVGRLEVVDFPKPYALQKLGGG 173 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 P P ++G V +G +E+SN N++ EM Q+I + F + ++ + Sbjct: 174 LFVPADPQATPNPVTGEKVMQGAIEESNVNTVQEMVQLIETNRYFEMCSKVVKAYDDLTG 233 Query: 236 EAIRNIA 242 +A I Sbjct: 234 KAANEIG 240 >gi|154686045|ref|YP_001421206.1| flagellar basal body rod protein FlgG [Bacillus amyloliquefaciens FZB42] gi|154351896|gb|ABS73975.1| FlgE [Bacillus amyloliquefaciens FZB42] Length = 258 Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats. Identities = 48/255 (18%), Positives = 97/255 (38%), Gaps = 16/255 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------Q 54 M S G++ + +L + +N++N +TVGF+ +V F +++ Q Sbjct: 1 MLRSLYSGISGMKNFQTKLDVIGNNIANVNTVGFKKSRVTFKDMISQTVAGGSNVTNSKQ 60 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSL 114 A+ + G+ +T + D A++GD +F + + GI+ TR G F + G+L Sbjct: 61 IGLGAATSSIDVVHSTGAPQATQNKTDLAIDGDGYFQINTGAGIVYTRAGNFGKDNQGNL 120 Query: 115 VSASGKYPVLDMAS----VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170 V+ G Y + + +GL + S G Sbjct: 121 VTTDGYYLEKIGGGKINIPTDAKDYSIGADGTVTYTDAGDEVHDAGQIGLVTFPNSAGLE 180 Query: 171 RRENSGISPNIPPTP------LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224 + + ++ + + G+LE SN + E +MI + F S + Sbjct: 181 KIGGNLYRESLSSGAASAVTTPGENGTGKLLAGYLEMSNVDLTDEFTEMIVAQRGFQSNS 240 Query: 225 TLIDENEKSMLEAIR 239 +I +++ + E + Sbjct: 241 KIITTSDEILQELVN 255 >gi|167038783|ref|YP_001661768.1| flagellar basal body rod protein [Thermoanaerobacter sp. X514] gi|256751340|ref|ZP_05492219.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter ethanolicus CCSD1] gi|300913632|ref|ZP_07130949.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter sp. X561] gi|307723353|ref|YP_003903104.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter sp. X513] gi|166853023|gb|ABY91432.1| flagellar basal body rod protein [Thermoanaerobacter sp. X514] gi|256749722|gb|EEU62747.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter ethanolicus CCSD1] gi|300890317|gb|EFK85462.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter sp. X561] gi|307580414|gb|ADN53813.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter sp. X513] Length = 251 Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats. Identities = 57/253 (22%), Positives = 107/253 (42%), Gaps = 15/253 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG-----------AIK 49 M + + + + +A+N++N +TVG++ V S Sbjct: 1 MLRGLYTASSGMITQTKIMDVLANNLANVNTVGYKRDVVVTSSFPNFEVTRHGGDNIPPN 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109 I + V + + E G+F T +LDFA++G+ +F +++P G TRDG F ++ Sbjct: 61 GKIGRMDYGVLVDTFHTNFEEGAFSQTNGKLDFAIDGNGFFVVDTPNGQRYTRDGSFTLS 120 Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169 DG LV+ G I +V E G I G+++ + + D G Sbjct: 121 KDGHLVTKEGYIVE----GENGPIQLSQGDISVDEMGNIINNGQLVDRLRIVDFDNYDGL 176 Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 + N+ + +K+GFLE SN NS+ EM MI + + + S ++ Sbjct: 177 RKEGNNLFFIDNSTNVQVIPVTGKIKQGFLEQSNVNSVKEMVNMISVMRNYESNQKVVIA 236 Query: 230 NEKSMLEAIRNIA 242 ++++ +A+ + Sbjct: 237 FDETLGKAVNEVG 249 >gi|78358198|ref|YP_389647.1| flagellar basal body rod protein FlgG [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78220603|gb|ABB39952.1| Flagellar basal body rod protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 261 Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 97/257 (37%), Gaps = 18/257 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S +A + + T+++N++N +T+GF+ + +F +++ Sbjct: 1 MMRSLWTAATGMIAQQLNIDTISNNLANVNTLGFKKSRAEFEDLMYQNMKIAGSVTGNDQ 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107 Q V + G + +TG LD A+EGD +F + TR G FK Sbjct: 61 RIPTGIQVGLGVRPTTVHKFFTQGDYSNTGNPLDLAIEGDGFFQVTVNGEPAYTRAGAFK 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 + DG++V+A+G + P + + + A + LY+ Sbjct: 121 LNQDGTVVTANGYPLEPEFTVPPETKNVVVTENGHIAALDKNGEELAAADIPLYTFINPA 180 Query: 168 GFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222 G + + + + T+ +GFLE SN + EM MI + + Sbjct: 181 GLQAAGRNLYLASEASGVAVEGVPGEDNVGTIAQGFLEMSNVEVVDEMVNMIVGQRAYEM 240 Query: 223 ITTLIDENEKSMLEAIR 239 + I ++ + A + Sbjct: 241 NSKAIQASDNMLQTATQ 257 >gi|256830176|ref|YP_003158904.1| flagellar basal-body rod protein FlgG [Desulfomicrobium baculatum DSM 4028] gi|256579352|gb|ACU90488.1| flagellar basal-body rod protein FlgG [Desulfomicrobium baculatum DSM 4028] Length = 260 Score = 182 bits (461), Expect = 4e-44, Method: Composition-based stats. Identities = 48/259 (18%), Positives = 92/259 (35%), Gaps = 19/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + +A + L A+N++N +T GF+ + +F +++ Sbjct: 1 MIRALWTSASGMIAQQLNLDVTANNLANVNTTGFKKNRAEFEDLMYQNMKIAGSSNQEGD 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107 Q V + G F +TG +LD +EGD +F ++ TR G FK Sbjct: 61 RLPVGMQVGMGVRPVSVHKIFTQGDFQNTGNQLDLVIEGDGFFRVDRGGEESYTRSGAFK 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 + DG +V+ +G + P + + + +Y+ Sbjct: 121 LDSDGRIVTDNGHPLQPEFIVPPETQNIVVTEDGRLTCVDKAGAEIAGTDIPVYTFVNPA 180 Query: 168 GFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222 G + + + T+ +GFLE SN + EM MI + + + Sbjct: 181 GLKAMGRNLYVQTDGSGEAVESVPGENNAGTLAQGFLEMSNVEIVEEMVNMIVGQRAYEA 240 Query: 223 ITTLIDENEKSMLEAIRNI 241 + I + ML+ + Sbjct: 241 NSKSITTAD-MMLQTANQL 258 >gi|326389274|ref|ZP_08210842.1| flagellar basal-body rod protein FlgG [Thermoanaerobacter ethanolicus JW 200] gi|325994637|gb|EGD53061.1| flagellar basal-body rod protein FlgG [Thermoanaerobacter ethanolicus JW 200] Length = 266 Score = 181 bits (460), Expect = 5e-44, Method: Composition-based stats. Identities = 61/266 (22%), Positives = 106/266 (39%), Gaps = 25/266 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + A + + +A+N++N +T F+ + +F +++ + Sbjct: 1 MMRALWSAATGMTAQQLNVDVIANNLANVNTTAFKRDRAEFKDLIYQTLQRENVYGGQGK 60 Query: 54 ----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKV 108 Q V GS T LD AL+G+ +FA+ P + TRDG FK+ Sbjct: 61 PVNMQVGVGVRPSAIVKDFTEGSLQQTENPLDLALDGEGFFAVLGPDDKVYYTRDGSFKL 120 Query: 109 TDDGSLVS--ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK-----VIATMGLY 161 + DG+ + + YPVLD + PI ++ +V G IS K +AT+G+Y Sbjct: 121 SADGNTLMLVTADGYPVLDDSGNPIVFDSTEKDISVSPMGVISVKNPDGTTQEVATLGIY 180 Query: 162 SVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + QG + ++ P V +GFLE SN + EM MI Sbjct: 181 NFVNPQGLLSVGSNLYEPTEASGQPGTRDDFQGRMGKVMQGFLETSNVQVVKEMVDMIAA 240 Query: 217 TQKFNSITTLIDENEKSMLEAIRNIA 242 + + + I ++ + N+ Sbjct: 241 QRAYEINSKAIQAADEMLG-IANNLR 265 >gi|167038473|ref|YP_001666051.1| hypothetical protein Teth39_2092 [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320116868|ref|YP_004187027.1| flagellar basal-body rod protein FlgG [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166857307|gb|ABY95715.1| protein of unknown function DUF1078 domain protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319929959|gb|ADV80644.1| flagellar basal-body rod protein FlgG [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 266 Score = 181 bits (460), Expect = 5e-44, Method: Composition-based stats. Identities = 61/266 (22%), Positives = 106/266 (39%), Gaps = 25/266 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + A + + +A+N++N +T F+ + +F +++ + Sbjct: 1 MMRALWSAATGMTAQQLNVDVIANNLANVNTTAFKRDRAEFKDLIYQTLQRENVYGGQGK 60 Query: 54 ----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKV 108 Q V GS T LD AL+G+ +FA+ P + TRDG FK+ Sbjct: 61 PVNMQVGVGVRPSAIVKDFTEGSLQQTENPLDLALDGEGFFAVLGPDDKVYYTRDGSFKL 120 Query: 109 TDDGSLVS--ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK-----VIATMGLY 161 + DG+ + + YPVLD + PI ++ +V G IS K +AT+G+Y Sbjct: 121 SADGNTLMLVTADGYPVLDDSGNPIVFDSTEKDISVSPMGVISVKNPDGTTQEVATLGIY 180 Query: 162 SVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + QG + ++ P V +GFLE SN + EM MI Sbjct: 181 NFVNPQGLLSVGSNLYEPTEASGQPSTRDDFQGRMGKVMQGFLETSNVQVVKEMVDMIAA 240 Query: 217 TQKFNSITTLIDENEKSMLEAIRNIA 242 + + + I ++ + N+ Sbjct: 241 QRAYEINSKAIQAADEMLG-IANNLR 265 >gi|308173591|ref|YP_003920296.1| flagellar hook protein [Bacillus amyloliquefaciens DSM 7] gi|307606455|emb|CBI42826.1| flagellar hook protein [Bacillus amyloliquefaciens DSM 7] gi|328553477|gb|AEB23969.1| flagellar basal body rod protein FlgG [Bacillus amyloliquefaciens TA208] gi|328911732|gb|AEB63328.1| flagellar hook protein [Bacillus amyloliquefaciens LL3] Length = 258 Score = 181 bits (460), Expect = 6e-44, Method: Composition-based stats. Identities = 53/256 (20%), Positives = 106/256 (41%), Gaps = 18/256 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------Q 54 M S G++ + +L + +N++N +TVGF+ +V F +++ Q Sbjct: 1 MLRSLYSGISGMKNFQTKLDVIGNNIANVNTVGFKKSRVTFKDMISQTVAGGSNVTNSKQ 60 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSL 114 A+ + G+ +T + D A++GD +F + + GI+ TR G F + G+L Sbjct: 61 IGLGAATSSIDVVHSTGAPQATQNKSDLAIDGDGYFQINTGSGIVYTRAGNFGKDNKGNL 120 Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG-----KVIATMGLYSVDMSQGF 169 V+ G Y I IP + +++G G ++ +GL + S G Sbjct: 121 VTTDGYYLEKIG-GGKINIPTDAKDYSIGADGTVTYTDAGDAVHNAGQIGLVTFPNSSGL 179 Query: 170 VRRENSGISPNIPPTP------LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223 + + ++ + + G+LE SN + E +MI + F S Sbjct: 180 EKIGGNLYRESLSSGAASAVTTPGENGTGKLLAGYLEMSNVDLTDEFTEMIVAQRGFQSN 239 Query: 224 TTLIDENEKSMLEAIR 239 + +I +++ + E + Sbjct: 240 SKIITTSDEILQELVN 255 >gi|225619854|ref|YP_002721111.1| flagellar basal body rod protein FlgG [Brachyspira hyodysenteriae WA1] gi|225214673|gb|ACN83407.1| flagellar basal body rod protein FlgG [Brachyspira hyodysenteriae WA1] Length = 264 Score = 181 bits (460), Expect = 6e-44, Method: Composition-based stats. Identities = 50/261 (19%), Positives = 102/261 (39%), Gaps = 22/261 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S + ++ + T+A+N++N +T+G++ ++ F +++ Sbjct: 1 MVRSLWTAASGMNGMQFKTDTIANNLANVNTIGYKKVRADFEDLIYQNLKIQGTPATEDT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 V S + GS +TG +LD ALEG+ +F + P + TRDG F Sbjct: 61 VTPVGLQTGLGVKSAATQKMFDQGSLQATGNKLDLALEGEGFFQVLMPDGSVSYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNV---GEKGEISQKGKVIATMGLYSV 163 K+ +G LV+++G V ++ + ++ I K I + L+ Sbjct: 121 KIDANGQLVTSNGYRLVPEIVFPENFLVEQISISREGIVSVKIGDENDPVEIGQITLHRF 180 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQ 218 G + ++ I P + + +GF+E SN + EM MI + Sbjct: 181 INQPGLLSIGDNLYKETIASGPAFEGEPGANGFPRIHQGFVEMSNVKVVDEMVDMIVAQR 240 Query: 219 KFNSITTLIDENEKSMLEAIR 239 + + + ++ + + Sbjct: 241 AYEMNSKAVQTSDNLLATVVN 261 >gi|291280520|ref|YP_003497355.1| flagellar basal-body rod protein FlgG [Deferribacter desulfuricans SSM1] gi|290755222|dbj|BAI81599.1| flagellar basal-body rod protein FlgG [Deferribacter desulfuricans SSM1] Length = 262 Score = 181 bits (459), Expect = 6e-44, Method: Composition-based stats. Identities = 51/261 (19%), Positives = 94/261 (36%), Gaps = 21/261 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + + + +++N++N +T GF+ +V F +++ Sbjct: 1 MLRTLWTAASGMTTQQINIDNISNNLANVNTAGFKKSRVNFEDLLYQELKPAGGVTAAGI 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 Q G+F TG LD A+EGD +F + P G I TR+G F Sbjct: 61 NHPTGIQIGLGSKVVSTEKIFSQGNFQQTGNPLDIAIEGDGFFQVTLPDGTIGYTRNGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 KV DG+LV+A G ++A + E + + + + L Sbjct: 121 KVDADGNLVTAEGYLLEPNIAIPDNALEIIVGEDGTLSVTLPGEAEPTELGQIELAKFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + T+ +G LE SN N + EM +I + + Sbjct: 181 PSGLRSIGKNIYLQTAASGEPTTGIPGEDGFGTLAQGILEMSNVNVVEEMVNLITGQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + I ++ + + + N+ Sbjct: 241 EINSKAIQTGDEML-QIVNNL 260 >gi|45657204|ref|YP_001290.1| flagellar basal body rod protein FlgG [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45600442|gb|AAS69927.1| FlgG [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 265 Score = 181 bits (459), Expect = 6e-44, Method: Composition-based stats. Identities = 56/262 (21%), Positives = 95/262 (36%), Gaps = 23/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S +A + + T+++N++N +T GF+ + F ++V + Sbjct: 1 MMRSLWTAATGMIAQQFHIDTISNNLANVNTTGFKKNRADFEDLVYQHQVLAGTPATSVS 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGR 105 V + E+GSF +TG +LD A+ G+ F TRDG Sbjct: 61 EIPTGVNVGHGVRAAASQKLFEIGSFQATGNKLDMAITGEMGFFKIQMPDGSFAFTRDGS 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI---SQKGKVIATMGLYS 162 FK+ + +V+++G + I I GE + VI + LY Sbjct: 121 FKIDSNQQVVTSNGYLLEPPLILPEGAILNTLMISEQGEVTVKVGADIRPIVIGQVELYR 180 Query: 163 VDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLT 217 G + + P V +GFLE SN + EM MI Sbjct: 181 FVNPAGLQAIGKNLFQETVASGPEIPGTPGMEGFGNVLQGFLEMSNVKIVEEMVAMIVAQ 240 Query: 218 QKFNSITTLIDENEKSMLEAIR 239 + + S + I ++ + AI Sbjct: 241 RAYESNSKAIQTSDNMLSTAIS 262 >gi|300871597|ref|YP_003786470.1| flagellar basal-body rod protein FlgG [Brachyspira pilosicoli 95/1000] gi|300689298|gb|ADK31969.1| flagellar basal-body rod protein, FlgG [Brachyspira pilosicoli 95/1000] Length = 264 Score = 181 bits (459), Expect = 6e-44, Method: Composition-based stats. Identities = 50/261 (19%), Positives = 103/261 (39%), Gaps = 22/261 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S + ++ + T+A+N++N +T+G++ ++ F +++ Sbjct: 1 MLRSLWTAASGMNGMQFKTDTIANNLANVNTIGYKKVRADFEDLIYQNLKIQGTPATEDT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 V S + GS +TG +LD ALEG+ +F + P + TRDG F Sbjct: 61 VTPVGLQTGLGVKSAATQKMFDQGSLQATGNKLDLALEGEGFFQVLMPDGSVSYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNV---GEKGEISQKGKVIATMGLYSV 163 KV +G LV+++G V ++ + +K I + + + L+ Sbjct: 121 KVDANGQLVTSNGYKLVPEIIFPENFLVEKINISREGVVSVTIGDENEPVELGNITLHRF 180 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQ 218 G + ++ I P + + + +GF+E SN + EM MI + Sbjct: 181 INQAGLLSIGDNLYKETIASGPAFEGEAGSKGFPRIHQGFVEMSNVKVVDEMVDMIVAQR 240 Query: 219 KFNSITTLIDENEKSMLEAIR 239 + + + ++ + + Sbjct: 241 AYEMNSKAVQTSDNLLATVVN 261 >gi|58426792|gb|AAW75829.1| flagellar biosynthesis cell-distal portion of basal-body rod [Xanthomonas oryzae pv. oryzae KACC10331] Length = 341 Score = 181 bits (459), Expect = 6e-44, Method: Composition-based stats. Identities = 48/261 (18%), Positives = 90/261 (34%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + R+S +++N++NT+T GF+ + F +++ Sbjct: 81 MNQALWVAKTGLDAQQTRMSVISNNLANTNTTGFKRDRAAFEDLLYQQVRAPGGSTSAQT 140 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V + + GS TG LD + G +F ++ P G TRDG F Sbjct: 141 QLPTGLQLGTGVRVVSTFKGFDQGSQQQTGRALDVMVNGRGFFEVQMPDGTSAYTRDGTF 200 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165 ++ G LV+ SG + + I + L Sbjct: 201 QINAQGQLVTNSGYPLQPGIQVPEGAQSLTIGNDGTISVTLAGQAAAQEIGALTLTDFIN 260 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + P ++ + +G LE SN N++ E+ MI + + Sbjct: 261 PSGLQSKGENLFVETTASGPAQNGTPGLNGLGNTVQGALEGSNVNTVEELVSMIETQRAY 320 Query: 221 NSITTLIDENEKSMLEAIRNI 241 I + + N+ Sbjct: 321 EMNAKAISTTDAMLGYLNNNV 341 >gi|220903671|ref|YP_002478983.1| flagellar basal body rod protein FlgG [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219867970|gb|ACL48305.1| flagellar basal-body rod protein FlgG [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 261 Score = 181 bits (459), Expect = 6e-44, Method: Composition-based stats. Identities = 53/257 (20%), Positives = 100/257 (38%), Gaps = 18/257 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G +A + + +++N++N +T GF+ + +F +++ Sbjct: 1 MMRSLWTGATGMVAQQLNIDVISNNLANVNTTGFKKSRAEFEDLMYQTMRMAGSITEGDN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107 Q + G F +TG LD A+EGD +F ++ ++ TR G FK Sbjct: 61 RLPVGIQVGMGTRPTAVHKFFTQGDFQNTGNTLDVAIEGDGFFQVDVNGELMYTRAGSFK 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 + DG +V+A+G + A P + + A + LY+ Sbjct: 121 LNQDGVVVTANGYILQPEFAVPPETKNISISSSGHIAALDAQGQEIAGAEIPLYTFINYA 180 Query: 168 GFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222 G R + +P + + T+ +GFLE SN + EM MI + + Sbjct: 181 GLDARGRNLFTPTEASGEAVEGIPGTDNVGTLAQGFLEMSNVEVVDEMVNMIVGQRAYEV 240 Query: 223 ITTLIDENEKSMLEAIR 239 + I ++ + A++ Sbjct: 241 NSKSIQTSDSMLGIAVQ 257 >gi|315185552|gb|EFU19321.1| flagellar basal-body rod protein FlgG [Spirochaeta thermophila DSM 6578] Length = 264 Score = 181 bits (459), Expect = 7e-44, Method: Composition-based stats. Identities = 48/261 (18%), Positives = 93/261 (35%), Gaps = 22/261 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S + + + + TVA+N+SN +T GF+ +V F +++ Sbjct: 1 MMRSLWTAASGMVGQQYHIDTVANNLSNVNTTGFKKNRVDFQDLIYQTVRMAGTPATEVT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 V G+ T D A++G+ +F + G TRDG F Sbjct: 61 VVPTPTQVGHGVRVAASSKIFTQGALQHTDNVSDLAIQGEGFFRVLLYDGTYAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE---KGEISQKGKVIATMGLYSV 163 K+ +G LV+++G + ++ I + G K + + +Y Sbjct: 121 KIDSNGQLVTSNGYRLIPEIVLPEGFIADTLSVSEDGRVTVKVPGQDDPVEVGQIQIYRF 180 Query: 164 DMSQGFVRRENSGI-SPNIPPTP----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 G + ++ N P + FLE SN + + EM +MI + Sbjct: 181 VNPSGLLAVGDNLYKVTNASGDPIGGRPGFDGMGKLLHKFLEMSNVSVVNEMVEMIVAQR 240 Query: 219 KFNSITTLIDENEKSMLEAIR 239 + + + ++ + A+ Sbjct: 241 AYELNSKAVQTSDSMLGTAVN 261 >gi|307718428|ref|YP_003873960.1| flagellar basal-body rod protein [Spirochaeta thermophila DSM 6192] gi|306532153|gb|ADN01687.1| flagellar basal-body rod protein [Spirochaeta thermophila DSM 6192] Length = 264 Score = 181 bits (459), Expect = 7e-44, Method: Composition-based stats. Identities = 50/261 (19%), Positives = 93/261 (35%), Gaps = 22/261 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S + + + + TVA+N+SN +T GF+ +V F +++ Sbjct: 1 MMRSLWTAASGMVGQQYHIDTVANNLSNVNTTGFKKNRVDFQDLIYQTVRMAGTPATEVT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 V G+ T D A++G+ +F + G TRDG F Sbjct: 61 VVPTPTQVGHGVRVAASSKIFTQGALQHTDNVSDLAIQGEGFFRVLLYDGTYAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQK---DEIFNVGEKGEISQKGKVIATMGLYSV 163 K+ +G LV+++G + ++ I E V K + + LY Sbjct: 121 KIDSNGQLVTSNGYRLIPEIVLPEGFIADTLAVSEDGRVTVKVPGQDDPVEVGQIQLYRF 180 Query: 164 DMSQGFVRRENSGI-SPNIPPTP----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 G + ++ N P + FLE SN + + EM +MI + Sbjct: 181 VNPAGLLAVGDNLYKVTNASGDPIGGRPGFDGMGKLLHKFLEMSNVSVVNEMVEMIVAQR 240 Query: 219 KFNSITTLIDENEKSMLEAIR 239 + + + ++ + A+ Sbjct: 241 AYELNSKAVQTSDSMLGTAVN 261 >gi|241766922|ref|ZP_04764728.1| flagellar basal-body rod protein FlgG [Acidovorax delafieldii 2AN] gi|241362626|gb|EER58474.1| flagellar basal-body rod protein FlgG [Acidovorax delafieldii 2AN] Length = 259 Score = 181 bits (459), Expect = 7e-44, Method: Composition-based stats. Identities = 47/258 (18%), Positives = 91/258 (35%), Gaps = 19/258 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S I A + +L ++ N++N T G++ F +++ + Sbjct: 1 MINSLWIAKTGMSAQQTQLDVISHNLANVSTTGYKRNNAVFEDLIYQNLRQVGANSSEQS 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 V G+ +G + D A+ G +F + P TRDG F Sbjct: 61 QLPTGLHLGLGVNVVATNRDFRQGALQQSGKDFDLAINGAGFFQVSMPDGTTAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 + DG +V++SG + V + + + K + L S Sbjct: 121 TIDKDGQMVNSSGYPLTDGITKVAGAVKASIAANGEVTFTDSAGKAVGTGRLTLASFINP 180 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFN 221 G + +I + S + +K+GFLE SN N + E+ MI + + Sbjct: 181 AGLEPVGQNLYKESIASGNPQTGSPTSAGFGELKQGFLETSNVNVVEELVTMIQTQRAYE 240 Query: 222 SITTLIDENEKSMLEAIR 239 + I +++ + + + Sbjct: 241 MNSKAIQTSDQMLAKLAQ 258 >gi|296127366|ref|YP_003634618.1| flagellar basal-body rod protein FlgG [Brachyspira murdochii DSM 12563] gi|296019182|gb|ADG72419.1| flagellar basal-body rod protein FlgG [Brachyspira murdochii DSM 12563] Length = 264 Score = 181 bits (459), Expect = 8e-44, Method: Composition-based stats. Identities = 49/261 (18%), Positives = 102/261 (39%), Gaps = 22/261 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S + ++ + T+A+N++N +T+G++ ++ F +++ Sbjct: 1 MVRSLWTAASGMNGMQFKTDTIANNLANVNTIGYKKVRADFEDLIYQNLKIQGTPATEDT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 V S + GS +TG +LD ALEG+ +F + P + TRDG F Sbjct: 61 VRPVGLQTGLGVKSASTQKMFDQGSLQATGNKLDLALEGEGFFQVLMPDGSVSYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNV---GEKGEISQKGKVIATMGLYSV 163 K+ +G +V+++G V ++ + ++ I K I + L+ Sbjct: 121 KIDANGQMVTSNGYRLVPEIVFPENFLVEQISISREGVVSVKIGDENDPVEIGQITLHRF 180 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQ 218 G + ++ I P + + +GF+E SN + EM MI + Sbjct: 181 INQPGLLSIGDNLYKETIASGPAFEGEPGANGFPRIHQGFVEMSNVKVVDEMVDMIVAQR 240 Query: 219 KFNSITTLIDENEKSMLEAIR 239 + + + ++ + + Sbjct: 241 AYEMNSKAVQTSDNLLATVVN 261 >gi|307266108|ref|ZP_07547653.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter wiegelii Rt8.B1] gi|306918890|gb|EFN49119.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter wiegelii Rt8.B1] Length = 251 Score = 181 bits (458), Expect = 9e-44, Method: Composition-based stats. Identities = 57/253 (22%), Positives = 107/253 (42%), Gaps = 15/253 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV-----------GAIK 49 M + + + + +A+N++N +TVG++ V S Sbjct: 1 MLRGLYTASSGMITQTKIMDVLANNLANVNTVGYKRDVVVTSSFPNFEVTRHGGDNTPPN 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109 I + V + + E G+F T +LDFA++G+ +F + +P G TRDG F ++ Sbjct: 61 GKIGRMDYGVLVDTFHTNFEEGAFSQTNGKLDFAIDGNGFFVVNTPNGQRYTRDGSFTLS 120 Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169 DG LV+ G I +V E G I G+++ + + D G Sbjct: 121 KDGYLVTQEGYIVE----GENGPIQLSQGDISVDEMGNIINNGQLVDRLRIVDFDNYDGL 176 Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 + N+ + + +K+GFLE SN NS+ EM MI + + + S ++ Sbjct: 177 RKEGNNLFFIDNSANVQVIPATGKIKQGFLEQSNVNSVKEMVNMISVMRNYESNQKVVIA 236 Query: 230 NEKSMLEAIRNIA 242 ++++ +A+ + Sbjct: 237 FDETLGKAVNEVG 249 >gi|312794499|ref|YP_004027422.1| flagellar basal-body rod protein flgg [Caldicellulosiruptor kristjanssonii 177R1B] gi|312876700|ref|ZP_07736680.1| flagellar basal-body rod protein FlgG [Caldicellulosiruptor lactoaceticus 6A] gi|311796540|gb|EFR12889.1| flagellar basal-body rod protein FlgG [Caldicellulosiruptor lactoaceticus 6A] gi|312181639|gb|ADQ41809.1| flagellar basal-body rod protein FlgG [Caldicellulosiruptor kristjanssonii 177R1B] Length = 267 Score = 181 bits (458), Expect = 9e-44, Method: Composition-based stats. Identities = 47/266 (17%), Positives = 96/266 (36%), Gaps = 26/266 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + A + + +++N++N +T F+ K +F +++ + D Sbjct: 1 MMRALYSAALGMKAQQTNVDIISNNLANVNTTAFKKDKAEFKDLLYETLSRADVVAGDGK 60 Query: 54 ----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109 Q V S G+ T LD A++G+ +F + +P G TRDG FKV+ Sbjct: 61 PVSLQIGHGVTISAITKSFAEGNLERTENPLDLAIQGEGFFVVSTPNGPRYTRDGSFKVS 120 Query: 110 DDGSL---VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL------ 160 + V++ G + + + + + E G I+ K + Sbjct: 121 NVEGQIKLVTSDGYPVLAEGDTEIVLPETAISSITIDETGRITYKDQDGQIQDSGLKIKI 180 Query: 161 YSVDMSQGFVRRENSGISPNIP-----PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIH 215 QG + + + + + + +GFLE SN + EM ++I Sbjct: 181 VRFINPQGLLAEGKNLYNVSAASGDPVSEEEIEGQKSRILQGFLEMSNVQVVDEMVKLII 240 Query: 216 LTQKFNSITTLIDENEKSMLEAIRNI 241 + + + I + + N+ Sbjct: 241 AQRAYEINSKAIQTADDML-SMANNL 265 >gi|312136039|ref|YP_004003377.1| flagellar basal-body rod protein flgg [Caldicellulosiruptor owensensis OL] gi|311776090|gb|ADQ05577.1| flagellar basal-body rod protein FlgG [Caldicellulosiruptor owensensis OL] Length = 267 Score = 181 bits (458), Expect = 9e-44, Method: Composition-based stats. Identities = 47/266 (17%), Positives = 96/266 (36%), Gaps = 26/266 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + A + + +++N++N +T F+ K +F +++ + D Sbjct: 1 MMRALYSAALGMKAQQTNVDIISNNLANVNTTAFKKDKAEFKDLLYETLSRADVVAGDGK 60 Query: 54 ----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109 Q V S G+ T LD A++G+ +F + +P G TRDG FKV+ Sbjct: 61 PVSLQIGHGVTISAITKSFAEGNLERTENPLDLAIQGEGFFVVSTPNGPRYTRDGSFKVS 120 Query: 110 DDGSL---VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL------ 160 + V++ G + + + + + E G I+ K + Sbjct: 121 NVEGQIKLVTSDGYPVLAEGDTEIVLPETAISSITIDEMGRITYKDQEGQVQDSGLKIKI 180 Query: 161 YSVDMSQGFVRRENSGISPNIP-----PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIH 215 QG + + + + + + +GFLE SN + EM ++I Sbjct: 181 VRFINPQGLLAEGKNLYNVSAASGEPVSEEEMEGQKSRILQGFLEMSNVQVVDEMVKLII 240 Query: 216 LTQKFNSITTLIDENEKSMLEAIRNI 241 + + + I + + N+ Sbjct: 241 AQRAYEINSKAIQTADDML-SIANNL 265 >gi|317153844|ref|YP_004121892.1| flagellar basal-body rod protein FlgG [Desulfovibrio aespoeensis Aspo-2] gi|316944095|gb|ADU63146.1| flagellar basal-body rod protein FlgG [Desulfovibrio aespoeensis Aspo-2] Length = 260 Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats. Identities = 47/257 (18%), Positives = 94/257 (36%), Gaps = 18/257 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S +A++ + T+++N++N +T GF+ + +F +++ Sbjct: 1 MMRSLWTAATGMVAMQTHIDTLSNNLANVNTTGFKKSRAEFEDLMYQTLQIAGTETQSGG 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107 Q V + G F +TG LD A+EG+ +F ++ + TRDG FK Sbjct: 61 RLPVGMQVGMGVRPVSVHKFFTQGDFKNTGNPLDIAIEGEGFFLVDMNGEDVYTRDGSFK 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 + ++G +V+A G + P + + + +Y Sbjct: 121 LDNEGRVVTAGGHVLQPEFTIPPETVSVVITETGHISALDKDGAALAETDIDIYRFQNPA 180 Query: 168 GFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222 G + + + T+ + FLE SN + EM +I + + Sbjct: 181 GLTAIGRNFYRGSEASGDAVAGTPGDENFGTLAQAFLEGSNVEMVDEMVGLIVGQRAYEI 240 Query: 223 ITTLIDENEKSMLEAIR 239 + I ++ + AI Sbjct: 241 NSKAITTSDGMLQTAIN 257 >gi|332800001|ref|YP_004461500.1| flagellar basal-body rod protein FlgF [Tepidanaerobacter sp. Re1] gi|332697736|gb|AEE92193.1| flagellar basal-body rod protein FlgF [Tepidanaerobacter sp. Re1] Length = 255 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 54/261 (20%), Positives = 113/261 (43%), Gaps = 25/261 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M G + L+ R +++N++N +T GF+ + F + + D Sbjct: 1 MIRGLYTGASGMLSEMSRTDVISNNLANVNTSGFKKDRAIFRALPEMNIHRFDDPITVGL 60 Query: 56 -------------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTR 102 + V + G+ T LD AL G+ +F +++P GI TR Sbjct: 61 DRVIDPRPFIGMLGTGVMLDEINTDFSQGAIKVTSNPLDIALRGEGFFEVQTPEGIRYTR 120 Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162 DG F + DG +V+ G Y + + + ++ + ++GE++ G+ + + + + Sbjct: 121 DGSFTIDRDGYIVTKDGYYVLGENG---PMLLPQEGDVVISQQGEVTVSGQFVDRLEIVN 177 Query: 163 VDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222 V++ ++ + P P + V +G LE SN N++ EM +I + + + Sbjct: 178 FADQGQVVKQGSNLYNSQAPTVPTD----AEVIQGALEGSNTNTISEMVDLITAFRAYEA 233 Query: 223 ITTLIDENEKSMLEAIRNIAS 243 +I +++++ A+ +IAS Sbjct: 234 SQKVIQTHDETLDRAVNDIAS 254 >gi|332704823|ref|ZP_08424911.1| flagellar basal-body rod protein FlgG [Desulfovibrio africanus str. Walvis Bay] gi|332554972|gb|EGJ52016.1| flagellar basal-body rod protein FlgG [Desulfovibrio africanus str. Walvis Bay] Length = 260 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 51/257 (19%), Positives = 95/257 (36%), Gaps = 18/257 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S +A + + T+++N++N +T+GF+ + +F +++ Sbjct: 1 MMRSLWTAATGMVAQQMNIDTISNNLANVNTIGFKKSRAEFEDLMYQTMKIAGTRTEGGN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107 Q V + G F +T LD A+EGD +F ++ TR G FK Sbjct: 61 VTPVGIQMGMGVRPMTVHKFFTQGDFQNTSNPLDIAIEGDGFFLVDFNGTEAFTRAGAFK 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 + ++G +V+A+G + P + + + LY+ + Sbjct: 121 LDNEGRMVTANGYLLQPEFTVPPETVNVVISEQGHLAALDRQGNELSSTDLQLYTFQNNA 180 Query: 168 GFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222 G + P + T+ +GFLE SN + EM MI + F Sbjct: 181 GLNAIGRNLFIETEASGPATAGTPGEENVGTLAQGFLEGSNVELVDEMVGMIIGQRAFEV 240 Query: 223 ITTLIDENEKSMLEAIR 239 + I ++ + AI Sbjct: 241 NSKAISTSDTMLQTAIN 257 >gi|323697472|ref|ZP_08109384.1| flagellar basal-body rod protein FlgG [Desulfovibrio sp. ND132] gi|323457404|gb|EGB13269.1| flagellar basal-body rod protein FlgG [Desulfovibrio desulfuricans ND132] Length = 260 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 51/257 (19%), Positives = 94/257 (36%), Gaps = 18/257 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S +A++ ++ T+++N++N T F+ + +F +++ Sbjct: 1 MMRSLWTSATGMIAMQTQIDTLSNNLANVSTTAFKKSRAEFEDLMYQTLKIAGGENADGT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107 Q V + G F +TG LD A+EG+ +F + + TRDG F+ Sbjct: 61 QTPVGMQIGMGVRPVSVHKFFTQGDFQNTGNPLDMAIEGEGFFQVMVNGDEVYTRDGSFE 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 + DG +V+A G + P + A + LY Sbjct: 121 LDSDGRVVTAGGYPLQPEFTVPPETSSISISETGTISALDKDGTVLATADIDLYRFQNPA 180 Query: 168 GFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222 G + + + D + T+ +GFLE SN + EM +I + F Sbjct: 181 GLIATGRNFYRESDASGVAVAGTPGDDNYGTIAQGFLEGSNVEMVDEMVGLIVGQRAFEI 240 Query: 223 ITTLIDENEKSMLEAIR 239 + I ++ + AI Sbjct: 241 NSKAITTSDGMLQTAIN 257 >gi|312621332|ref|YP_004022945.1| flagellar basal-body rod protein flgg [Caldicellulosiruptor kronotskyensis 2002] gi|312201799|gb|ADQ45126.1| flagellar basal-body rod protein FlgG [Caldicellulosiruptor kronotskyensis 2002] Length = 267 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 48/266 (18%), Positives = 95/266 (35%), Gaps = 26/266 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + A + + +++N++N +T F+ K +F +++ + D Sbjct: 1 MMRALYSAALGMKAQQTNVDIISNNLANVNTTAFKKDKAEFKDLLYETLSRADVVAGDGK 60 Query: 54 ----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109 Q V S G+ T LD A++G+ +F + +P G TRDG FKV+ Sbjct: 61 PVSLQIGHGVTISAITKSFAEGNLERTENPLDLAIQGEGFFVVSTPNGPRYTRDGSFKVS 120 Query: 110 DDGSL---VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL------ 160 + V++ G + + + I + E G I+ K Sbjct: 121 NVEGQIKLVTSDGYPVLAEGDTEIILPETAISSITIDETGRITYKDAEGQVQDSGLKIKI 180 Query: 161 YSVDMSQGFVRRENSGISPNIP-----PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIH 215 QG + + + + + + +GFLE SN + EM ++I Sbjct: 181 VRFINPQGLLAEGKNLYNVSAASGDPVSEEEMEGQKSRILQGFLEMSNVQVVDEMVKLII 240 Query: 216 LTQKFNSITTLIDENEKSMLEAIRNI 241 + + + I + + N+ Sbjct: 241 AQRAYEINSKAIQTADDML-SMANNL 265 >gi|167038474|ref|YP_001666052.1| flagellar basal body rod protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320116869|ref|YP_004187028.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166857308|gb|ABY95716.1| flagellar basal body rod protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319929960|gb|ADV80645.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 251 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 57/253 (22%), Positives = 106/253 (41%), Gaps = 15/253 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV-----------GAIK 49 M + + + + +A+N++N +TVG++ V S Sbjct: 1 MLRGLYTASSGMITQTKIMDVLANNLANVNTVGYKRDVVVTSPFPNFEVTRHGGDNTPPN 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109 I V + + E G+F T +LDFA++G+ +F + +P G TRDG F ++ Sbjct: 61 GKIGTMDYGVLVDTFHTNFEEGAFSQTNGKLDFAIDGNGFFVVNTPNGQRYTRDGSFTLS 120 Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169 DG LV+ G I +V E G I G+++ + + D G Sbjct: 121 KDGYLVTQEGYIVE----GENGPIQLSQGDISVDEMGNIINNGQLVDRLRIVDFDNYDGL 176 Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 + N+ + + +K+GFLE SN NS+ EM MI + + + S ++ Sbjct: 177 RKEGNNLFFIDNSANVQVIPATGKIKQGFLEQSNVNSVKEMVNMISVMRNYESNQKVVIA 236 Query: 230 NEKSMLEAIRNIA 242 ++++ +A+ + Sbjct: 237 FDETLGKAVNEVG 249 >gi|254478074|ref|ZP_05091457.1| conserved domain protein [Carboxydibrachium pacificum DSM 12653] gi|214035936|gb|EEB76627.1| conserved domain protein [Carboxydibrachium pacificum DSM 12653] Length = 266 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 60/266 (22%), Positives = 103/266 (38%), Gaps = 25/266 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + A + + +A+N++N +T F+ + +F +++ + Sbjct: 1 MMRALWSAATGMTAQQLNVDVIANNLANVNTTAFKRDRAEFKDLIYQTLQRENVYGGQGR 60 Query: 54 ----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKV 108 Q V G+ TG LD AL+G +FA+ P + TRDG FK+ Sbjct: 61 PVNMQVGVGVRPSAIVKDFSEGNLYQTGNPLDLALDGPGFFAVLGPDDKVYYTRDGSFKL 120 Query: 109 TDDGSLVS--ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK-----VIATMGLY 161 + DG+ + + YPVLD ++ PI V G I K +AT+G+Y Sbjct: 121 SPDGNTLMLVTADGYPVLDDSNNPIVFDGNVNDITVSPLGVIQVKNPDGTTQEVATLGIY 180 Query: 162 SVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + QG + N+ + V +GFLE SN + EM MI Sbjct: 181 NFTNPQGLLSVGNNLYEATEASGQPGTRDDFEGRMGKVMQGFLETSNVQVVKEMVDMIAA 240 Query: 217 TQKFNSITTLIDENEKSMLEAIRNIA 242 + + + I ++ + N+ Sbjct: 241 QRAYEINSKAIQAADEMLG-IANNLR 265 >gi|114566479|ref|YP_753633.1| flagellar basal-body rod protein FlgG [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337414|gb|ABI68262.1| flagellar basal-body rod protein FlgG [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 261 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 46/258 (17%), Positives = 94/258 (36%), Gaps = 19/258 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S + A + + T++ NM+N +TVGF+ +++F +++ Sbjct: 1 MMRSLYTASSGMYAQQLNIDTLSHNMANVNTVGFKKQRLEFQDLLYQTIRRPAADEDRNE 60 Query: 56 ------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRFK 107 V G+ +T LD A+ G A+F ++ ++ TRDG FK Sbjct: 61 PVGLLVGLGVKPAAINTIFNTGNLQATENPLDVAINGTAFFGVKVAGNDELLYTRDGAFK 120 Query: 108 VTDDGSLVSASGKYPVL-DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 + +G LV+A G Q + + + + L+ Sbjct: 121 IDANGQLVTADGNLLEGAGTFDEGAYDIQIASDGKISYMIPGQETPEEAGQLKLFKFINP 180 Query: 167 QGFVRRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221 G + + + + V+++ G+LE SN + EM +I + + Sbjct: 181 AGLQKIGKNLYRATPNSGEAEEWQPDSDNSVSLEAGYLEMSNVQIVEEMVNLITAQRAYE 240 Query: 222 SITTLIDENEKSMLEAIR 239 + +I +++ + A Sbjct: 241 INSKVIISSDEMLQTAAN 258 >gi|221309506|ref|ZP_03591353.1| flagellar basal body rod protein FlgG [Bacillus subtilis subsp. subtilis str. 168] gi|221313830|ref|ZP_03595635.1| flagellar basal body rod protein FlgG [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221318753|ref|ZP_03600047.1| flagellar basal body rod protein FlgG [Bacillus subtilis subsp. subtilis str. JH642] gi|221323025|ref|ZP_03604319.1| flagellar basal body rod protein FlgG [Bacillus subtilis subsp. subtilis str. SMY] gi|255767369|ref|NP_389511.2| flagellar basal body rod protein FlgG [Bacillus subtilis subsp. subtilis str. 168] gi|321315395|ref|YP_004207682.1| flagellar basal body rod protein FlgG [Bacillus subtilis BSn5] gi|239938626|sp|P23446|FLGG_BACSU RecName: Full=Flagellar basal-body rod protein flgG; AltName: Full=Distal rod protein gi|142919|gb|AAA22444.1| flgG [Bacillus subtilis] gi|225184996|emb|CAB13502.2| flagellar hook protein [Bacillus subtilis subsp. subtilis str. 168] gi|320021669|gb|ADV96655.1| flagellar basal body rod protein FlgG [Bacillus subtilis BSn5] Length = 264 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 62/262 (23%), Positives = 114/262 (43%), Gaps = 24/262 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G++ + +L + +N++N +TVGF+ +V F ++V Sbjct: 1 MLRSLYSGISGMKNFQTKLDVIGNNIANVNTVGFKKSRVTFKDMVSQTIAGGSAAGATIG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 + Q +SG + STG LD A++GD +F +++ G TR G F + Sbjct: 61 GTNSKQIGLGSSSGTIDTIHSTSATQSTGRTLDLAIDGDGYFRIDTGDGTAYTRAGNFYL 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ-----KGKVIATMGLYSV 163 + G+LV+ G + L+M I+IP + F++G G++S K + +G+ + Sbjct: 121 DNTGTLVTGDGYHV-LNMNGGTIKIPTDAQSFSIGSDGKVSIVDAEGKTQDGGQIGIVTF 179 Query: 164 DMSQGFVRRENSGI------SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217 S G + ++ D +K GFLE SN + E +MI Sbjct: 180 ANSDGLDKIGSNLYRESLNSGTASAANQPGDGGTGALKSGFLEMSNVDLTDEFTEMIVAQ 239 Query: 218 QKFNSITTLIDENEKSMLEAIR 239 + F S + +I +++ + E + Sbjct: 240 RGFQSNSKIITTSDEILQELVN 261 >gi|302872712|ref|YP_003841348.1| flagellar basal-body rod protein FlgG [Caldicellulosiruptor obsidiansis OB47] gi|302575571|gb|ADL43362.1| flagellar basal-body rod protein FlgG [Caldicellulosiruptor obsidiansis OB47] Length = 267 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 47/266 (17%), Positives = 96/266 (36%), Gaps = 26/266 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + A + + +++N++N +T F+ K +F +++ + D Sbjct: 1 MMRALYSAALGMKAQQTNVDIISNNLANVNTTAFKKDKAEFKDLLYETLSRADVVAGDGK 60 Query: 54 ----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109 Q V S G+ T LD A++G+ +F + +P G TRDG FKV+ Sbjct: 61 PVSLQIGHGVTISAITKSFAEGNLERTENPLDLAIQGEGFFVVSTPNGPRYTRDGSFKVS 120 Query: 110 DDGSL---VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL------ 160 + V++ G + + + + + E G I+ K + Sbjct: 121 NVEGQIKLVTSDGYPVLAEGDTEIVLPETAISSITIDETGRITYKDQEGQIQDSGLKIKI 180 Query: 161 YSVDMSQGFVRRENSGISPNIP-----PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIH 215 QG + + + + + + +GFLE SN + EM ++I Sbjct: 181 VRFINPQGLLAEGKNLYNVSAASGEPVSEEEMEGQKSRILQGFLEMSNVQVVDEMVKLII 240 Query: 216 LTQKFNSITTLIDENEKSMLEAIRNI 241 + + + I + + N+ Sbjct: 241 AQRAYEINSKAIQTADDML-SMANNL 265 >gi|20806699|ref|NP_621870.1| flagellar basal body and hook proteins [Thermoanaerobacter tengcongensis MB4] gi|20515153|gb|AAM23474.1| Flagellar basal body and hook proteins [Thermoanaerobacter tengcongensis MB4] Length = 266 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 55/266 (20%), Positives = 101/266 (37%), Gaps = 25/266 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + A + + +A+N++N +T F+ + +F +++ + Sbjct: 1 MMRALWSAATGMTAQQLNVDVIANNLANVNTTAFKRDRAEFKDLIYQTLQRENVYGGQGR 60 Query: 54 ----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKV 108 Q V G+ TG LD AL+G +FA+ P + TRDG FK+ Sbjct: 61 PVNMQVGVGVRPSAIVKDFSEGNLYQTGNPLDLALDGPGFFAVLGPDDKVYYTRDGSFKL 120 Query: 109 TDDG---SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG----KVIATMGLY 161 + DG LV+A G + D + + ++I + + +AT+G+Y Sbjct: 121 SPDGNTFMLVTADGYPVLDDSNNPIVFDGNVNDITVSPLGVIQVKNPDGTTQEVATLGIY 180 Query: 162 SVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + QG + N+ + V +GFLE SN + EM MI Sbjct: 181 NFTNPQGLLSVGNNLYEATEASGQPGTRDDFEGRMGKVMQGFLETSNVQVVKEMVDMIAA 240 Query: 217 TQKFNSITTLIDENEKSMLEAIRNIA 242 + + + I ++ + N+ Sbjct: 241 QRAYEINSKAIQAADEMLG-IANNLR 265 >gi|39912|emb|CAA39528.1| unnamed protein product [Bacillus subtilis subsp. subtilis str. 168] Length = 264 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 62/262 (23%), Positives = 114/262 (43%), Gaps = 24/262 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G++ + +L + +N++N +TVGF+ +V F ++V Sbjct: 1 MLRSLYSGISGMKNFQTKLDVIGNNIANVNTVGFKKSRVTFKDMVSQTIAGGSAAGATIG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 + Q +SG + STG LD A++GD +F +++ G TR G F + Sbjct: 61 GTNSKQIGLGSSSGTIDTIHSTSATQSTGRTLDLAIDGDGYFRIDTGDGTAYTRAGNFYL 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ-----KGKVIATMGLYSV 163 + G+LV+ G + L+M I+IP + F++G G++S K + +G+ + Sbjct: 121 DNTGTLVTGDGYHV-LNMNGGTIKIPTDAQTFSIGSDGKVSIVDAEGKTQDGGQIGIVTF 179 Query: 164 DMSQGFVRRENSGI------SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217 S G + ++ D +K GFLE SN + E +MI Sbjct: 180 ANSDGLDKIGSNLYRESLNSGTASAANQPGDGGTGALKSGFLEMSNVDLTDEFTEMIVAQ 239 Query: 218 QKFNSITTLIDENEKSMLEAIR 239 + F S + +I +++ + E + Sbjct: 240 RGFQSNSKIITTSDEILQELVN 261 >gi|300114797|ref|YP_003761372.1| flagellar basal-body rod protein FlgG [Nitrosococcus watsonii C-113] gi|299540734|gb|ADJ29051.1| flagellar basal-body rod protein FlgG [Nitrosococcus watsonii C-113] Length = 261 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 46/261 (17%), Positives = 92/261 (35%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + I A + R++T+++N++N +T GF+ + F +++ + Sbjct: 1 MNQALWIAKTGLDAQQTRMATISNNLANVNTTGFKRDRAVFEDLLYQTVRQPGAQSSQNT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + V + G TG LD A++G +F + P + TRDG F Sbjct: 61 LLPSGLMLGTGVRTVATEKLFTQGGLTQTGNSLDMAIQGRGFFQVLMPDGSLAYTRDGTF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 ++ +G LV++SG + + V + L Sbjct: 121 QIDANGQLVTSSGYPVQPGITIPQSALSVTVGSDGIVSVLMPGDGTPVQAGNLQLADFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G N+ + T+ +G LE +N N + E+ MI + + Sbjct: 181 PAGLQPTGNNLFKETAASGVAQTGIPGLNGIGTLVQGALEGANVNVVEELVNMIETQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + I ++ + A + + Sbjct: 241 EMNSKAISSTDEMLRFATQTL 261 >gi|291484181|dbj|BAI85256.1| flagellar basal body rod protein FlgG [Bacillus subtilis subsp. natto BEST195] Length = 264 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 62/262 (23%), Positives = 113/262 (43%), Gaps = 24/262 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G++ + +L + +N++N +TVGF+ +V F ++V Sbjct: 1 MLRSLYSGISGMKNFQTKLDVIGNNIANVNTVGFKKSRVTFKDMVSQTIAGGSAAGATIG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 + Q +SG + STG LD A++GD +F +++ G TR G F + Sbjct: 61 GTNSKQIGLGSSSGTIDTIHSTSATQSTGRTLDLAIDGDGYFRIDTGDGTAYTRAGNFYL 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ-----KGKVIATMGLYSV 163 + G+LV+ G + L+M I+IP + F++G G++S K + +G+ + Sbjct: 121 DNTGTLVTGDGYHV-LNMNGGTIKIPTDAQSFSIGSDGKVSIVDAEGKTQDGGQIGIVTF 179 Query: 164 DMSQGFVRRENSGI------SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217 S G + + D +K GFLE SN + E +MI Sbjct: 180 ANSDGLDKIGRNLYRESLNSGTASAANQPGDGGTGALKSGFLEMSNVDLTDEFTEMIVAQ 239 Query: 218 QKFNSITTLIDENEKSMLEAIR 239 + F S + +I +++ + E + Sbjct: 240 RGFQSNSKIITTSDEILQELVN 261 >gi|77165836|ref|YP_344361.1| hypothetical protein Noc_2373 [Nitrosococcus oceani ATCC 19707] gi|254434083|ref|ZP_05047591.1| flagellar basal-body rod protein FlgG [Nitrosococcus oceani AFC27] gi|76884150|gb|ABA58831.1| conserved hypothetical protein [Nitrosococcus oceani ATCC 19707] gi|207090416|gb|EDZ67687.1| flagellar basal-body rod protein FlgG [Nitrosococcus oceani AFC27] Length = 261 Score = 180 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 46/261 (17%), Positives = 92/261 (35%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + I A + R++T+++N++N +T GF+ + F +++ + Sbjct: 1 MNQALWIAKTGLDAQQTRMATISNNLANVNTTGFKRDRAVFEDLLYQTVRQPGAQSSQNT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + V + G TG LD A++G +F + P + TRDG F Sbjct: 61 LLPSGLMLGTGVRTVATEKLFTQGGLTQTGNSLDMAIQGRGFFQILMPDGSLAYTRDGTF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 ++ +G LV++SG + + V + L Sbjct: 121 QIDANGQLVTSSGYPVQPGITIPESALSVTVGSDGIVSVLMAGDGTPIQAGNLQLADFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G N+ + T+ +G LE +N N + E+ MI + + Sbjct: 181 PAGLQPTGNNLFKETASSGVAQTGIPGLNGIGTLVQGALEGANVNVVEELVNMIETQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + I ++ + A + + Sbjct: 241 EMNSKAISSTDEMLRFATQTL 261 >gi|116327820|ref|YP_797540.1| flagellar basal body rod protein FlgG [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116120564|gb|ABJ78607.1| Endoflagellar distal basal body rod protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] Length = 265 Score = 180 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 55/262 (20%), Positives = 95/262 (36%), Gaps = 23/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S +A + + T+++N++N +T GF+ + F ++V + Sbjct: 1 MMRSLWTAATGMIAQQFHIDTISNNLANVNTTGFKKNRADFEDLVYQHQVLAGTPATSVS 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGR 105 V + E+GSF +TG +LD A+ G+ F +RDG Sbjct: 61 EIPTGVNVGHGVRAAASQKLFEIGSFQATGNKLDMAITGEMGFFKIQMPDGSFAFSRDGS 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI---SQKGKVIATMGLYS 162 FK+ + +V+++G + I I GE + VI + LY Sbjct: 121 FKIDSNQQVVTSNGYLLEPPLILPEGAILNTLMISEQGEVTVKVGADIRPIVIGQVELYR 180 Query: 163 VDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLT 217 G + + P V +GFLE SN + EM MI Sbjct: 181 FVNPAGLQAIGKNLFQETVASGPEIPGTPGMEGFGNVLQGFLEMSNVKIVEEMVAMIVAQ 240 Query: 218 QKFNSITTLIDENEKSMLEAIR 239 + + S + I ++ + AI Sbjct: 241 RAYESNSKAIQTSDNMLSTAIS 262 >gi|323704841|ref|ZP_08116418.1| flagellar basal-body rod protein FlgG [Thermoanaerobacterium xylanolyticum LX-11] gi|323535767|gb|EGB25541.1| flagellar basal-body rod protein FlgG [Thermoanaerobacterium xylanolyticum LX-11] Length = 266 Score = 180 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 57/266 (21%), Positives = 103/266 (38%), Gaps = 25/266 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + + +++N++N +T F+ + +F +++ D Sbjct: 1 MIRALWSAASGMNAQQLNVDVISNNLANVNTTAFKRDRAEFQDLIYQTLQTEDVNGGQGK 60 Query: 54 ----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFK- 107 Q V GS T LD AL+G+ +FA+ P TRDG FK Sbjct: 61 PVNMQVGVGVRPSAIVKDFSEGSLQETDNPLDVALDGEGFFAVLGPDGNTYYTRDGSFKL 120 Query: 108 -VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG-----KVIATMGLY 161 V + + ++ + YPVLD PI + ++ G IS K + +AT+G+Y Sbjct: 121 SVDQNTATLTTADGYPVLDDGGNPITFDSTQKDISISPLGVISVKNSDGTQQDVATLGIY 180 Query: 162 SVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + G + + ++ V++GFLE SN + EM MI Sbjct: 181 NFQNPDGLLDKGDNLYEATAASGDPGTRDDFQGRMGNVRQGFLETSNVQVVNEMVNMIAA 240 Query: 217 TQKFNSITTLIDENEKSMLEAIRNIA 242 + + + I + + N+ Sbjct: 241 QRAYELNSKAIQAADDML-SIANNLR 265 >gi|296330843|ref|ZP_06873318.1| flagellar basal body rod protein FlgG [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305674361|ref|YP_003866033.1| flagellar hook protein [Bacillus subtilis subsp. spizizenii str. W23] gi|296151848|gb|EFG92722.1| flagellar basal body rod protein FlgG [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305412605|gb|ADM37724.1| flagellar hook protein [Bacillus subtilis subsp. spizizenii str. W23] Length = 264 Score = 180 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 63/262 (24%), Positives = 116/262 (44%), Gaps = 24/262 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G++ + +L + +N++N +TVGF+ +V F ++V Sbjct: 1 MLRSLYSGISGMKNFQTKLDVIGNNIANVNTVGFKKSRVTFKDMVSQTIAGGSAAGATIG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 + Q +SG + STG LD A++GD +F +++ GI TR G F + Sbjct: 61 GTNSKQIGLGSSSGTIDTIHSTSATQSTGRTLDLAIDGDGYFRIDTGDGIAYTRAGNFYL 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ-----KGKVIATMGLYSV 163 + G+LV+ G + L+M IQIP + F++G G++S + + +G+ + Sbjct: 121 DNTGTLVTGDGYHV-LNMNGGTIQIPTDAQSFSIGSDGKVSIVDAGGQTQDGGQIGIVTF 179 Query: 164 DMSQGFVRRENSGI------SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217 S G + ++ D ++K GFLE SN + E +MI Sbjct: 180 ANSDGLDKVGSNLYRESLNSGTASAANQPGDGGTGSLKSGFLEMSNVDLTDEFTEMIVAQ 239 Query: 218 QKFNSITTLIDENEKSMLEAIR 239 + F S + +I +++ + E + Sbjct: 240 RGFQSNSKIITTSDEILQELVN 261 >gi|312126442|ref|YP_003991316.1| flagellar basal-body rod protein flgg [Caldicellulosiruptor hydrothermalis 108] gi|311776461|gb|ADQ05947.1| flagellar basal-body rod protein FlgG [Caldicellulosiruptor hydrothermalis 108] Length = 267 Score = 180 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 47/266 (17%), Positives = 96/266 (36%), Gaps = 26/266 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + A + + +++N++N +T F+ K +F +++ + D Sbjct: 1 MMRALYSAALGMKAQQTNVDIISNNLANVNTTAFKKDKAEFKDLLYETLSRADVVAGDGK 60 Query: 54 ----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109 Q V S G+ T LD A++G+ +F + +P G TRDG FKV+ Sbjct: 61 PVSLQIGHGVTISAITKSFAEGNLERTENPLDLAIQGEGFFVVSTPNGPRYTRDGSFKVS 120 Query: 110 DDGSL---VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL------ 160 + V++ G + + + + + E G I+ K + Sbjct: 121 NVEGQIKLVTSDGYPVLAEGDTEIVLPETAISSITIDETGRITYKDQDGQIQDSGFKIKI 180 Query: 161 YSVDMSQGFVRRENSGISPNIP-----PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIH 215 QG + + + + + + +GFLE SN + EM ++I Sbjct: 181 VRFINPQGLLAEGKNLYNVSATSGDPVSEEEMEGQKSRILQGFLEMSNVQVVDEMVKLII 240 Query: 216 LTQKFNSITTLIDENEKSMLEAIRNI 241 + + + I + + N+ Sbjct: 241 AQRAYEINSKAIQTADDML-SMANNL 265 >gi|292492365|ref|YP_003527804.1| flagellar basal-body rod protein FlgG [Nitrosococcus halophilus Nc4] gi|291580960|gb|ADE15417.1| flagellar basal-body rod protein FlgG [Nitrosococcus halophilus Nc4] Length = 261 Score = 180 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 46/261 (17%), Positives = 91/261 (34%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + I A + R++ +++N++N +T GF+ + F +++ + Sbjct: 1 MNQALWIAKTGLDAQQTRMAVISNNLANVNTTGFKRGRAVFEDLLYQTVRQPGAQSSQNT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + V + G T LD A++G +F + P + TRDG F Sbjct: 61 QLPSGLMLGTGVRTVATEKLFSQGGIAQTENPLDLAIQGRGFFQILMPDGSLAYTRDGTF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 +V DG LV++SG + + V + + L Sbjct: 121 QVDADGQLVTSSGYPVEPRITIPEGALSVTVGSDGIVSVLVAGDTAPTQLGNVQLADFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G N+ + T+ +G LE +N N + E+ MI + + Sbjct: 181 PAGLQPIGNNLFKETASSGVAQTGIPGLTGFGTLVQGALEGANVNVVEELVNMIETQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + I ++ + A + + Sbjct: 241 EMNSKAIAGTDEMLQFATQTL 261 >gi|94263287|ref|ZP_01287103.1| conserved hypothetical protein [delta proteobacterium MLMS-1] gi|94267694|ref|ZP_01290963.1| conserved hypothetical protein [delta proteobacterium MLMS-1] gi|93451896|gb|EAT02627.1| conserved hypothetical protein [delta proteobacterium MLMS-1] gi|93456370|gb|EAT06494.1| conserved hypothetical protein [delta proteobacterium MLMS-1] Length = 260 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 45/259 (17%), Positives = 90/259 (34%), Gaps = 19/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + G + +L T+++N++N +T GF+ + +F ++ + Sbjct: 1 MIRALYSGTTGMRGQQLQLDTISNNLANVNTAGFKKSRTQFEDLYYQELRAVGVENIDGG 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107 Q V + GS TG++LD A+EG +F + TR G F Sbjct: 61 QVPSGMQVGLGVKATANQKIFTQGSIHETGSDLDIAIEGKGFFQVLKDGEEFYTRAGNFT 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 DG +V+ +G + P + + + + +Q+ + L+ Sbjct: 121 RDADGFIVTQNGDRLQPEFQIPPETVSLHIGADGLIQAKDAAQEIIAEDQLTLFDFINPG 180 Query: 168 GFVRRENSGISPN-IPPTPLEDLSGVT----VKRGFLEDSNANSMYEMGQMIHLTQKFNS 222 G + P E G + + F E SN E+ +I + F Sbjct: 181 GLRAEGGNLFRATEASGDPREADPGTEGVGVLLQRFNEVSNVEVTEELVNLIITQRAFEM 240 Query: 223 ITTLIDENEKSMLEAIRNI 241 + + ++ + E + Sbjct: 241 NSKSVQTADQLL-EVANTL 258 >gi|216263448|ref|ZP_03435443.1| flagellar basal-body rod protein FlgG [Borrelia afzelii ACA-1] gi|215980292|gb|EEC21113.1| flagellar basal-body rod protein FlgG [Borrelia afzelii ACA-1] Length = 265 Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats. Identities = 49/263 (18%), Positives = 93/263 (35%), Gaps = 23/263 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + + A + + T+A+N+SN +T GF+ I+ +F +++ +N Sbjct: 1 MMRALWTAASGMTAQQYNVDTIANNLSNVNTTGFKKIRAEFEDLIYQTQNRAGTPATENT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 E G ST D A+EGD ++ + P G TRDG F Sbjct: 61 LRPLGNQVGHGTKIAATQRIFEQGKMQSTNLLTDVAIEGDGFYKILLPDGTYAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNV---GEKGEISQKGKVIATMGLYSV 163 K+ + LV++ G + ++ I I K + S + + + + Sbjct: 121 KIDSNRELVTSQGYKVLPNIFFPEEYIRDSITISEQGIVSVKIDNSNEPIELGQIEISRF 180 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 G ++ +++G LE SN + EM MI + Sbjct: 181 VNPAGLSAIGSNLFKETAGSGQEIAGIPGSKGMGKLRQGILEMSNVSIAEEMVTMIVAQR 240 Query: 219 KFNSITTLIDENEKSMLEAIRNI 241 + + I ++ + N+ Sbjct: 241 AYEINSKAIQTSDNMLG-IANNL 262 >gi|327398888|ref|YP_004339757.1| flagellar basal-body rod protein FlgG [Hippea maritima DSM 10411] gi|327181517|gb|AEA33698.1| flagellar basal-body rod protein FlgG [Hippea maritima DSM 10411] Length = 262 Score = 179 bits (453), Expect = 3e-43, Method: Composition-based stats. Identities = 49/259 (18%), Positives = 94/259 (36%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S A + + T+A+N++N +TVGF+ + F +++ + Sbjct: 1 MIRSLWTAATGMEAQQLNVDTIANNLANVNTVGFKRSRADFEDLLYQMVRQPGVASTANT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q V + G+F TG LD A+ G +F ++ P TR G F Sbjct: 61 VEPTGIQIGLGVKPAAVVKNFSQGNFKETGNPLDIAIAGHGFFQIQMPDGTTAYTRSGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQI-PQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 K+ ++G +V++ G + + + V Q I + L Sbjct: 121 KIDNNGRIVNSEGYPLIPQITIPNDTVAINIGNDGTVSVLEAGQQTPSQIGQIQLAYFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ + T+++G LE SN + + EM +MI + + Sbjct: 181 PAGLKAIGHNLYQETTASGTATVDNPGSNGLGTLEQGVLEMSNVSVVQEMVEMIAAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + I +++ + A Sbjct: 241 ETNAKAIQTSDEMLQTANN 259 >gi|298529926|ref|ZP_07017328.1| flagellar basal-body rod protein FlgG [Desulfonatronospira thiodismutans ASO3-1] gi|298509300|gb|EFI33204.1| flagellar basal-body rod protein FlgG [Desulfonatronospira thiodismutans ASO3-1] Length = 260 Score = 179 bits (453), Expect = 3e-43, Method: Composition-based stats. Identities = 42/259 (16%), Positives = 87/259 (33%), Gaps = 19/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S A + + ++N++N +T GF+ + +F +++ + Sbjct: 1 MMRSLWTAATGMAAQQMNIDVTSNNLANVNTDGFKKSQAQFEDLMYQTLKVAGTENLTGD 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107 + G + TG LD +EGD +F + + + TR G FK Sbjct: 61 RVPTGLQVGMGTNPLSVHKIFTQGDYKQTGNPLDLTIEGDGFFQVMANDEVRYTRAGSFK 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 DG +V+A+G + + + + +Y Sbjct: 121 PDQDGRIVTANGYPLQPEFHIPEDTARVHVDEQGNIVCVDGDDNVIAEGEIPIYRFMNPA 180 Query: 168 GFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222 G + S P + + +++ G LE SN + EM MI + + Sbjct: 181 GLNSAGRNLYSETEASGPATEGVPGEENFGSIRSGALESSNVEIVDEMVNMIIGQRAYEI 240 Query: 223 ITTLIDENEKSMLEAIRNI 241 + I +++ + + + Sbjct: 241 NSKAIQTSDQML-QMANQM 258 >gi|239817163|ref|YP_002946073.1| flagellar basal-body rod protein FlgG [Variovorax paradoxus S110] gi|239803740|gb|ACS20807.1| flagellar basal-body rod protein FlgG [Variovorax paradoxus S110] Length = 260 Score = 179 bits (453), Expect = 3e-43, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 85/259 (32%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + +L V++N++N T GF+ + F +++ + Sbjct: 1 MMRSLYIAKTGLDAQQTQLDVVSNNLANVGTTGFKRSRAVFEDLMYQNLRQVGGQTSDQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+ T D A+ G +F + P TRDG F Sbjct: 61 RLPSGLQVGTGVHVVATERIHSQGNLTKTDKPTDVAINGGGFFQVLMPDGTTAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 + DG LV+ASG + V + + L + Sbjct: 121 QTDRDGQLVTASGFPVQPAITLPANATSLTIGRDGIVSITQAGQTNTVQVGQLQLATFLN 180 Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + +G++E SN N + E+ MI + + Sbjct: 181 PAGLQSKGENLYAETDASGAPNQVNPGIDGAGILSQGYVEASNVNVVEELVNMIATQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + Sbjct: 241 EINSKAVQTSDQMLQRLAQ 259 >gi|307266107|ref|ZP_07547652.1| flagellar basal-body rod protein FlgG [Thermoanaerobacter wiegelii Rt8.B1] gi|306918889|gb|EFN49118.1| flagellar basal-body rod protein FlgG [Thermoanaerobacter wiegelii Rt8.B1] Length = 266 Score = 179 bits (453), Expect = 4e-43, Method: Composition-based stats. Identities = 61/266 (22%), Positives = 106/266 (39%), Gaps = 25/266 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + A + + +A+N++N +T F+ + +F +++ + Sbjct: 1 MMRALWSVATGMTAQQLNVDVIANNLANVNTTAFKRDRAEFKDLIYQTLQRENVYGGQGK 60 Query: 54 ----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKV 108 Q V GS T LD AL+G+ +FA+ P + TRDG FK+ Sbjct: 61 PVNMQVGVGVRPSAIVKDFTEGSLQQTENPLDLALDGEGFFAVLGPDDKVYYTRDGSFKL 120 Query: 109 TDDGSLVS--ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK-----VIATMGLY 161 + DG+ + + YPVLD + PI ++ +V G IS K +AT+G+Y Sbjct: 121 SADGNTLMLVTADGYPVLDDSGNPIVFDSTEKDISVSPMGVISVKNPDGTTQEVATLGIY 180 Query: 162 SVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + QG + ++ P V +GFLE SN + EM MI Sbjct: 181 NFVNPQGLLSVGSNLYEPTEASGQPGTRDDFQGRMGKVMQGFLETSNVQVVKEMVDMIAA 240 Query: 217 TQKFNSITTLIDENEKSMLEAIRNIA 242 + + + I ++ + N+ Sbjct: 241 QRAYEINSKAIQAADEMLG-IANNLR 265 >gi|218249434|ref|YP_002375273.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi ZS7] gi|218164622|gb|ACK74683.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi ZS7] Length = 265 Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats. Identities = 49/263 (18%), Positives = 92/263 (34%), Gaps = 23/263 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + + A + + T+A+N+SN +T GF+ I+ +F +++ N Sbjct: 1 MMRALWTAASGMTAQQYNVDTIANNLSNVNTTGFKKIRAEFEDLIYQTHNRAGTPATENT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 E G ST D A+EGD ++ + P G TRDG F Sbjct: 61 LRPLGNQVGHGTKIAATQRIFEQGKMQSTNLLTDVAIEGDGFYKILLPDGTYAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNV---GEKGEISQKGKVIATMGLYSV 163 K+ + LV++ G + ++ I I K + S + + + + Sbjct: 121 KIDSNRELVTSQGYKVLPNILFPEEYIQNSITISKEGIVSVKIDTSNEPIELGQIEISRF 180 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 G ++ +++G LE SN + EM MI + Sbjct: 181 INPAGLSAIGSNLFKETAGSGQEIAGIPGSEGMGRLRQGILEMSNVSIAEEMVTMIVAQR 240 Query: 219 KFNSITTLIDENEKSMLEAIRNI 241 + + I ++ + N+ Sbjct: 241 AYEINSKAIQTSDNMLG-IANNL 262 >gi|118581849|ref|YP_903099.1| flagellar basal body rod protein FlgG [Pelobacter propionicus DSM 2379] gi|118504559|gb|ABL01042.1| flagellar basal-body rod protein FlgG [Pelobacter propionicus DSM 2379] Length = 262 Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats. Identities = 48/259 (18%), Positives = 87/259 (33%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A ++ + VA N++N +T GF+ + F +++ + Sbjct: 1 MMRALWTAASGMQAQQKNIDVVAHNLANVNTTGFKRSRADFEDLIYQNQRSTGSPATNTT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q G F TG ELD A+EGD +F ++ P +R G F Sbjct: 61 QVPTGIQIGLGTRLASVSKLFTTGDFSQTGNELDIAIEGDGFFQIQMPDGTTAYSRAGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 K D G +V+ +G + ++ V + T+ L Sbjct: 121 KKDDQGRIVTPNGDPLLPEIVIPNNTTKIDIGSDGTVSATQSGQTTPTTVGTIQLALFAN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + TV +G LE SN + EM MI + + Sbjct: 181 PAGLFSMGKNLYKETDSSGTPTTGTPGQDGLGTVAQGMLEMSNVSVAEEMVNMIIGQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + + ++ + A Sbjct: 241 EANSKAVQAADEMLQTANN 259 >gi|82702455|ref|YP_412021.1| hypothetical protein Nmul_A1326 [Nitrosospira multiformis ATCC 25196] gi|82410520|gb|ABB74629.1| conserved hypothetical protein [Nitrosospira multiformis ATCC 25196] Length = 260 Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats. Identities = 45/259 (17%), Positives = 90/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + ++ +A+N++N T GF+ + F +++ Sbjct: 1 MIRSLWISKTGLDAQQTQMDVIANNLANVSTNGFKRSRAVFEDLLYQTLRQPGAQSSQQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+ TG D A++G +F + P TRDG F Sbjct: 61 QLPSGLQLGTGVRPVATEHIFTQGNLQQTGNSKDVAIQGQGFFQVLRPDGSTAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 + +G LV++SG + + P V + S + + L + Sbjct: 121 QTDFEGQLVTSSGYHVQPAITIPPNAQSITVGRDGIVSVTTQDSTTPVQVGNLQLATFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + T + +G++E SN N + E+ MI + + Sbjct: 181 PAGLQSVGENLYVETASSGTPNVTNPGTDGAGLLNQGYVETSNVNVVEELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + Sbjct: 241 EINSKSVQTSDQMLQRLTQ 259 >gi|220932495|ref|YP_002509403.1| flagellar basal body rod protein [Halothermothrix orenii H 168] gi|219993805|gb|ACL70408.1| flagellar basal body rod protein [Halothermothrix orenii H 168] Length = 248 Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats. Identities = 56/250 (22%), Positives = 111/250 (44%), Gaps = 13/250 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTI---KVKFSEVVGA-----IKNDI 52 M ++ + ++++ VA+N++N +T G++ +V F EV + + Sbjct: 1 MIKGIYTAASSMVTNQRKMKLVANNLANVNTAGYKRDEGIQVSFPEVFISRLEKGQATPL 60 Query: 53 DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDG 112 + + V ++Y G TG LD A++G+ +F +E+PRG TR+G F V + G Sbjct: 61 GELGTGVKIEEDYTDFREGQMNHTGNPLDVAIDGNGFFVVETPRGRRYTRNGNFTVNEQG 120 Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172 +V+ G PVL I ++ + G++ + + + QG + Sbjct: 121 QIVTQQGY-PVLGERGPLQTIRGRNIS--INTDGQLYLDNLEGDRLLIVDFENRQGLRKI 177 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 + S +K+G+LE SN N + EM +MI + + F +I ++ Sbjct: 178 GENLYV--NEGIREIQASDYQIKQGYLETSNVNIVKEMVRMIEVNRAFEVNQKVIKNADQ 235 Query: 233 SMLEAIRNIA 242 ++ +A+ N+ Sbjct: 236 TLSKAVNNVG 245 >gi|111115606|ref|YP_710224.1| flagellar basal body rod protein FlgG [Borrelia afzelii PKo] gi|110890880|gb|ABH02048.1| flagellar basal-body rod protein [Borrelia afzelii PKo] Length = 265 Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats. Identities = 49/263 (18%), Positives = 93/263 (35%), Gaps = 23/263 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + + A + + T+A+N+SN +T GF+ I+ +F +++ +N Sbjct: 1 MMRALWTAASGMTAQQYNVDTIANNLSNVNTTGFKKIRAEFEDLIYQTQNRAGTPATENT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 E G ST D A+EGD ++ + P G TRDG F Sbjct: 61 LRPLGNQVGHGTKIAATQRIFEQGKMQSTNLLTDVAIEGDGFYKILLPDGTYAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNV---GEKGEISQKGKVIATMGLYSV 163 K+ + LV++ G + ++ I I K + S + + + + Sbjct: 121 KIDSNRELVTSQGYKVLPNIFFPEEYIRNSITISEQGIVSVKIDNSNEPIELGQIEISRF 180 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 G ++ +++G LE SN + EM MI + Sbjct: 181 VNPAGLSAIGSNLFKETAGSGQEIAGIPGSKGMGKLRQGILEMSNVSIAEEMVTMIVAQR 240 Query: 219 KFNSITTLIDENEKSMLEAIRNI 241 + + I ++ + N+ Sbjct: 241 AYEINSKAIQTSDNMLG-IANNL 262 >gi|85859196|ref|YP_461398.1| flagellar basal-body rod protein [Syntrophus aciditrophicus SB] gi|85722287|gb|ABC77230.1| flagellar basal-body rod protein [Syntrophus aciditrophicus SB] Length = 260 Score = 178 bits (452), Expect = 5e-43, Method: Composition-based stats. Identities = 53/260 (20%), Positives = 93/260 (35%), Gaps = 21/260 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S A + VA+N++N +TVGF+ + F +++ + + Sbjct: 1 MIRSLWTAATGMQAQQVEQDVVANNLANVNTVGFKKSRADFQDLMYQLSTKAGSETSSGN 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107 V G + TG D+A+EGD +F L+ + TR G FK Sbjct: 61 QLTVGIEIGMGVKPVATQKIFSQGDYQQTGNSFDWAIEGDGFFQLDDNGTTVYTRAGNFK 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 V DG L + G + +++ + + + + + L Sbjct: 121 VNRDGVLCNTDGLQLIPEVSIPQDAVTFTLDSGGTWTAADENGNTLATGRIELAKFINPA 180 Query: 168 GF------VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221 G + + G + P ED T + FLE SN N + EM +MI + + Sbjct: 181 GLSSIGRNLFEKTEGSGEPLTGNPGEDG-LGTTSQRFLEMSNVNVIDEMVKMIVGQRAYE 239 Query: 222 SITTLIDENEKSMLEAIRNI 241 + I + + I N+ Sbjct: 240 INSKSIVTADNML-SMINNL 258 >gi|294828153|ref|NP_712848.2| flagellar basal body rod protein FlgG [Leptospira interrogans serovar Lai str. 56601] gi|293386000|gb|AAN49866.2| endoflagellar distal basal body rod protein [Leptospira interrogans serovar Lai str. 56601] Length = 264 Score = 178 bits (452), Expect = 5e-43, Method: Composition-based stats. Identities = 55/261 (21%), Positives = 94/261 (36%), Gaps = 23/261 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55 S +A + + T+++N++N +T GF+ + F ++V + Sbjct: 1 MRSLWTAATGMIAQQFHIDTISNNLANVNTTGFKKNRADFEDLVYQHQVLAGTPATSVSE 60 Query: 56 -------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRF 106 V + E+GSF +TG +LD A+ G+ F TRDG F Sbjct: 61 IPTGVNVGHGVRAAASQKLFEIGSFQATGNKLDMAITGEMGFFKIQMPDGSFAFTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI---SQKGKVIATMGLYSV 163 K+ + +V+++G + I I GE + VI + LY Sbjct: 121 KIDSNQQVVTSNGYLLEPPLILPEGAILNTLMISEQGEVTVKVGADIRPIVIGQVELYRF 180 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 G + + P V +GFLE SN + EM MI + Sbjct: 181 VNPAGLQAIGKNLFQETVASGPEIPGTPGMEGFGNVLQGFLEMSNVKIVEEMVAMIVAQR 240 Query: 219 KFNSITTLIDENEKSMLEAIR 239 + S + I ++ + AI Sbjct: 241 AYESNSKAIQTSDNMLSTAIS 261 >gi|15595119|ref|NP_212908.1| flagellar basal body rod protein FlgG [Borrelia burgdorferi B31] gi|195941595|ref|ZP_03086977.1| flagellar basal body rod protein FlgG [Borrelia burgdorferi 80a] gi|216264940|ref|ZP_03436932.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi 156a] gi|221217835|ref|ZP_03589302.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi 72a] gi|223889350|ref|ZP_03623936.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi 64b] gi|224532949|ref|ZP_03673558.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi WI91-23] gi|224533277|ref|ZP_03673871.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi CA-11.2a] gi|225548956|ref|ZP_03769933.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi 94a] gi|225549893|ref|ZP_03770854.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi 118a] gi|226320636|ref|ZP_03796195.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi 29805] gi|226321474|ref|ZP_03797001.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi Bol26] gi|3913655|sp|O51715|FLGG_BORBU RecName: Full=Flagellar basal-body rod protein flgG; AltName: Full=Distal rod protein gi|2688724|gb|AAC67132.1| flagellar basal-body rod protein (flgG) [Borrelia burgdorferi B31] gi|215981413|gb|EEC22220.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi 156a] gi|221192141|gb|EEE18361.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi 72a] gi|223885036|gb|EEF56140.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi 64b] gi|224512113|gb|EEF82505.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi WI91-23] gi|224513442|gb|EEF83799.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi CA-11.2a] gi|225369352|gb|EEG98804.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi 118a] gi|225370559|gb|EEG99995.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi 94a] gi|226233270|gb|EEH32022.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi Bol26] gi|226233959|gb|EEH32681.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi 29805] gi|312149206|gb|ADQ29277.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi N40] Length = 265 Score = 178 bits (452), Expect = 5e-43, Method: Composition-based stats. Identities = 50/263 (19%), Positives = 93/263 (35%), Gaps = 23/263 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + + A + + T+A+N+SN +T GF+ I+ +F +++ N Sbjct: 1 MMRALWTAASGMTAQQYNVDTIANNLSNVNTTGFKKIRAEFEDLIYQTHNRAGTPATENT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 E G ST D A+EGD ++ + P G TRDG F Sbjct: 61 LRPLGNQVGHGTKIAATQRIFEQGKMQSTNLLTDVAIEGDGFYKILLPDGTYAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF---NVGEKGEISQKGKVIATMGLYSV 163 K+ + LV++ G + ++ I I V K + S + + + + Sbjct: 121 KIDSNRELVTSQGYKVLPNILFPEEYIQNSITISEEGIVSVKIDTSNEPIELGQIEISRF 180 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 G ++ +++G LE SN + EM MI + Sbjct: 181 INPAGLSAIGSNLFKETAGSGQEIAGIPGSEGMGRLRQGILEMSNVSIAEEMVTMIVAQR 240 Query: 219 KFNSITTLIDENEKSMLEAIRNI 241 + + I ++ + N+ Sbjct: 241 AYEINSKAIQTSDNMLG-IANNL 262 >gi|222530298|ref|YP_002574180.1| flagellar basal-body rod protein FlgG [Caldicellulosiruptor bescii DSM 6725] gi|222457145|gb|ACM61407.1| flagellar basal-body rod protein FlgG [Caldicellulosiruptor bescii DSM 6725] Length = 267 Score = 178 bits (451), Expect = 5e-43, Method: Composition-based stats. Identities = 47/266 (17%), Positives = 96/266 (36%), Gaps = 26/266 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + A + + +++N++N +T F+ K +F +++ + D Sbjct: 1 MMRALYSAALGMKAQQTNVDIISNNLANVNTTAFKKDKAEFKDLLYETLSRADVVAGDGK 60 Query: 54 ----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109 Q V S G+ T LD A++G+ +F + +P G TRDG FKV+ Sbjct: 61 PVSLQIGHGVTISAITKSFAEGNLERTENPLDLAIQGEGFFVVSTPNGPRYTRDGSFKVS 120 Query: 110 DDGSL---VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL------ 160 + V++ G + + + + + E G I+ K + Sbjct: 121 NVEGQIKLVTSDGYPVLAEGDTEIVLPETAISSITIDETGRITYKDQDGQIQDSGFKIKI 180 Query: 161 YSVDMSQGFVRRENSGISPNIP-----PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIH 215 QG + + + + + + +GFLE SN + EM ++I Sbjct: 181 VRFINPQGLLAEGKNLYNVSAASGDPMSEEEMEGQKSRILQGFLEMSNVQVVDEMVKLII 240 Query: 216 LTQKFNSITTLIDENEKSMLEAIRNI 241 + + + I + + N+ Sbjct: 241 AQRAYEINSKAIQTADDML-SMANNL 265 >gi|114330363|ref|YP_746585.1| flagellar basal body rod protein FlgG [Nitrosomonas eutropha C91] gi|114307377|gb|ABI58620.1| flagellar basal-body rod protein FlgG [Nitrosomonas eutropha C91] Length = 260 Score = 178 bits (451), Expect = 6e-43, Method: Composition-based stats. Identities = 52/259 (20%), Positives = 94/259 (36%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + ++ +A+N++N T GF+ ++ F +++ Sbjct: 1 MVRSLWISKTGLDAQQTKMDVIANNLANISTNGFKRMRPVFEDLLYQTIRQPGAQSSERT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V G+ TG D A++G+ +F + P G TRDG F Sbjct: 61 RLPSGLQLGTGVRPVATENIFLQGNLQQTGNTRDVAIQGEGFFQILLPDGTLAYTRDGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 + DG LV+ASG + P + V S + + L S Sbjct: 121 QSDQDGQLVTASGFPLQPSITIPPNTLSITIGRDGTVSVLTPGSATPLPVGNIQLTSFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 G R + + T + +GF+E SN N + E+ +MI + + Sbjct: 181 PAGLQRFGENLYLETMSSGVPNPGIPGTNGIGLLNQGFVETSNVNVVEELVEMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + I +++ + + Sbjct: 241 EINSRSIQTSDQMLSRLTQ 259 >gi|147678402|ref|YP_001212617.1| flagellar hook protein FlgE [Pelotomaculum thermopropionicum SI] gi|146274499|dbj|BAF60248.1| flagellar hook protein FlgE [Pelotomaculum thermopropionicum SI] Length = 264 Score = 178 bits (451), Expect = 6e-43, Method: Composition-based stats. Identities = 51/264 (19%), Positives = 99/264 (37%), Gaps = 23/264 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDI----- 52 M A L+ R+ +V++N++N T G++ + F E++ + I Sbjct: 1 MIRGLYSAAAGMDVLQARVESVSNNLANASTPGYKREDITIRSFPEMLLIRQGGIQRKPA 60 Query: 53 ------DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-----LT 101 + V + ++ G TG D A++G A+FA+ +P T Sbjct: 61 GTPEAIGTASNGVLLSELFIDHTQGDLRETGDPADVAIKGPAFFAVSAPGPESPDRVCYT 120 Query: 102 RDGRFKVTDDGSLVSASGKYPVL--DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG 159 R+G FK+ +G LV+A G + + ++ G + G + Sbjct: 121 RNGAFKIDQEGYLVTAGGYRVLGEDGEIRIEDFQLNDPARLSISPDGSVRIDGMEAGRLM 180 Query: 160 LYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 L D + P +V +G+LE N N + EM +I T+ Sbjct: 181 LVEFDDVNSLQKVGEGLFE--DPQGTGRPAVSSSVCQGYLEAPNVNVVDEMVSLITATRA 238 Query: 220 FNSITTLIDENEKSMLEAIRNIAS 243 + + +I ++ + +A+ + S Sbjct: 239 YEANQRIIQSQDELLAKAVNQVGS 262 >gi|307546966|ref|YP_003899445.1| flagellar basal body rod protein FlgG [Halomonas elongata DSM 2581] gi|307218990|emb|CBV44260.1| flagellar basal body rod protein FlgG [Halomonas elongata DSM 2581] Length = 260 Score = 178 bits (451), Expect = 6e-43, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 91/259 (35%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S + + +L +++N++N +T GF+ + F +++ Sbjct: 1 MINSLWTAKTGLESQQVKLDVISNNLANVNTNGFKRSRAVFEDLLYQNLRQPGAQNNVQN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G +TG D A+ G +F + P TRDG F Sbjct: 61 RLPSGMQVGTGVRPVATERLHTQGGLENTGNSRDLAINGKGFFQVRMPDGTTAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 ++ ++G +V+A+G + + E V S + + + + S Sbjct: 121 QLDENGQMVTANGYPLEPAIIIPQNALSVSIGEDGIVSITEPGSSESNEVGQISVSSFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + P + + +G++E SN N + EM MI + + Sbjct: 181 PTGLESIGGNLYRETTASGPRNEGIPGMNGAGRLSQGYVETSNVNVVEEMVGMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + Sbjct: 241 EINSKAVQTSDEMLARLTQ 259 >gi|157363239|ref|YP_001470006.1| flagellar basal-body rod protein FlgG [Thermotoga lettingae TMO] gi|157313843|gb|ABV32942.1| flagellar basal-body rod protein FlgG [Thermotoga lettingae TMO] Length = 261 Score = 178 bits (451), Expect = 6e-43, Method: Composition-based stats. Identities = 45/255 (17%), Positives = 93/255 (36%), Gaps = 19/255 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S A + +L T+++N++N DT G++ ++ +F ++V + Sbjct: 1 MMVSLYSAATGMWAQQYKLDTISNNLANVDTTGYKKVRAEFQDLVYQYYKNAGTPTAVNS 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRF 106 +G+ TG LD A+ GD +F ++ TRDG F Sbjct: 61 TIPTGIYFGHGTRLSATTKIFSLGNMEYTGNALDVAITGDGFFQVQLQDGRTAYTRDGTF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 KV +G +V+++G + ++ + + + + T+ L Sbjct: 121 KVDSEGRVVTSNGLALIPNIVVPADAVAINISPDGIFSAEMQDGTVQNLGTITLVRFVNP 180 Query: 167 QGFVRRENSGI-SPNIPPTPLE----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221 G ++ P+E +++G+LE +N + + EM MI + + Sbjct: 181 SGLKAVGDNLYLETTASGEPIEGTPNQDGFGALQQGYLEKANVDVVKEMVDMITAQRAYE 240 Query: 222 SITTLIDENEKSMLE 236 I + + Sbjct: 241 LNARAIQTADNMLQT 255 >gi|183220919|ref|YP_001838915.1| flagellar basal body rod protein FlgG [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911015|ref|YP_001962570.1| flagellar basal body rod protein FlgG [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167775691|gb|ABZ93992.1| Endoflagellar distal basal body rod protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779341|gb|ABZ97639.1| Flagellar basal-body rod protein FlgG (Distal rod protein) [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 265 Score = 178 bits (451), Expect = 6e-43, Method: Composition-based stats. Identities = 60/261 (22%), Positives = 101/261 (38%), Gaps = 23/261 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S G +A + + TVA+N++N +T GF+ +V F ++V + Sbjct: 1 MMRSLWTGATGMIAQQFHIDTVANNLANVNTTGFKKNRVDFEDLVYQHQVLAGTPATSVS 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDA-WFALESPRGII-LTRDGR 105 V E+GSF +TG +LD AL G+ +F ++ P G +RDG Sbjct: 61 EIPTGVNVGHGVKVAATQKLFEIGSFQATGNKLDLALTGEMAFFKIQMPDGTFSYSRDGS 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE---KGEISQKGKVIATMGLYS 162 FK+ + +V+++G + I + GE K + I + LY Sbjct: 121 FKIDSNQQVVTSNGYLLEPPIILPENAILNTLMVSEEGEVTVKIGNDIRPTTIGQLELYR 180 Query: 163 VDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLT 217 G + + +V +GFLE SN + EM MI Sbjct: 181 FVNPAGLQAVGKNLFRETVASGQEIPGMPSQEGYGSVLQGFLEMSNVKIVEEMVNMIVAQ 240 Query: 218 QKFNSITTLIDENEKSMLEAI 238 + + S + I ++ + AI Sbjct: 241 RAYESNSKTIQTSDNMLSTAI 261 >gi|326389273|ref|ZP_08210841.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter ethanolicus JW 200] gi|325994636|gb|EGD53060.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter ethanolicus JW 200] Length = 251 Score = 178 bits (451), Expect = 6e-43, Method: Composition-based stats. Identities = 56/253 (22%), Positives = 106/253 (41%), Gaps = 15/253 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV-----------GAIK 49 M + + + + + +N++N +TVG++ V S Sbjct: 1 MLRGLYTASSGMITQTKIMDVLVNNLANVNTVGYKRDVVVTSSFPNFEVTRHGGDNTPPN 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109 I + V + + E G+F T +LDFA++G+ +F + +P G TRDG F ++ Sbjct: 61 GKIGRMDYGVLVDTFHTNFEEGAFSQTNGKLDFAIDGNGFFVVNTPNGQRYTRDGSFTLS 120 Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169 DG LV+ G I +V E G I G+++ + + D G Sbjct: 121 KDGYLVTQEGYIVE----GENGPIQLSQGDISVDEMGNIINNGQLVDRLRIVDFDNYDGL 176 Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 + N+ + + +K+GFLE SN NS+ EM MI + + + S ++ Sbjct: 177 RKEGNNLFFIDNSANVQVIPATGKIKQGFLEQSNVNSVKEMVNMISVMRNYESNQKVVIA 236 Query: 230 NEKSMLEAIRNIA 242 ++++ +A+ + Sbjct: 237 FDETLGKAVNEVG 249 >gi|296134368|ref|YP_003641615.1| flagellar basal-body rod protein FlgF [Thermincola sp. JR] gi|296032946|gb|ADG83714.1| flagellar basal-body rod protein FlgF [Thermincola potens JR] Length = 251 Score = 178 bits (451), Expect = 7e-43, Method: Composition-based stats. Identities = 57/256 (22%), Positives = 107/256 (41%), Gaps = 22/256 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS---EVVGAIKNDIDQK-- 55 M A LA R A+N++N +T G++ F E++ D Sbjct: 1 MIRGLYTSAAGMLAESARNDVAANNLANVNTTGYKKDAAVFKSFPEMLIQRMEKPDNPAQ 60 Query: 56 ---------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106 + V + G T LD A+ GD +F +++P G TR+G F Sbjct: 61 LKPEKVGWLGTGVIVDEVITIHTQGQLKETTNPLDMAISGDGYFVIQTPAGERYTRNGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 + +G LV++ G Y + +I + V ++G IS G+VI T+ + S + Sbjct: 121 TLDSEGYLVTSEGNYVL----GQRGRIRIGNNDIVVDKQGNISANGQVIDTLRIVSFNDP 176 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 V++ +S + + + LE SN N + EM +I + + + + + Sbjct: 177 NRLVKQGDSLFA----GGQPVAGFNGQIMQKALETSNVNPVQEMVDLITIMRAYEANQKM 232 Query: 227 IDENEKSMLEAIRNIA 242 I +++++ +AI ++A Sbjct: 233 IQAHDQTLGQAINDVA 248 >gi|254445900|ref|ZP_05059376.1| flagellar basal-body rod protein FlgG [Verrucomicrobiae bacterium DG1235] gi|198260208|gb|EDY84516.1| flagellar basal-body rod protein FlgG [Verrucomicrobiae bacterium DG1235] Length = 260 Score = 178 bits (451), Expect = 7e-43, Method: Composition-based stats. Identities = 48/257 (18%), Positives = 88/257 (34%), Gaps = 18/257 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S + A + L+ +++N++N T GF+ KV+F ++ + + Sbjct: 1 MSISLYSAASGMEAQQTNLNVISNNIANVSTTGFKKSKVEFQDMFYQVPKSVGADSGGNI 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFK 107 Q + G TG +LD A+ GD +F + P + TRDG FK Sbjct: 61 LPTGIQVGTGTQVVSTSKVFTQGQVSQTGEQLDVAIVGDGFFRVTGPDNETLYTRDGAFK 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 V G + ++ G + A + S Sbjct: 121 VGPTGEVTNSQGMTAIDFAAPPAGTTKVVINDTGGVTYLADDSDVLGRGQLQTARFRNSS 180 Query: 168 GFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222 G + + + T+++G+LE SN N + EM MI + + Sbjct: 181 GLLALGGNLFRETDASGAPTVGNPGADGSGTLQQGYLETSNVNIVEEMVNMILAQRAYEI 240 Query: 223 ITTLIDENEKSMLEAIR 239 + I ++ M + + Sbjct: 241 NSKSIQTSDSMMQQVAQ 257 >gi|288574697|ref|ZP_06393054.1| flagellar basal-body rod protein FlgG [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570438|gb|EFC91995.1| flagellar basal-body rod protein FlgG [Dethiosulfovibrio peptidovorans DSM 11002] Length = 262 Score = 178 bits (450), Expect = 8e-43, Method: Composition-based stats. Identities = 43/257 (16%), Positives = 94/257 (36%), Gaps = 20/257 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M S G +A + L ++N++N +TVG++ ++ F++++ I + + Sbjct: 1 MIRSLWTGATGMVAQQTNLDVTSNNLANVNTVGYKKVRTNFADLLYQINREPGSPVEGGT 60 Query: 61 SGKEYLS-------------KEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + + GS+ T L+ A+EG+A+F + P I + +G + Sbjct: 61 TVPTGIQVGLGARVNGTSRITTPGSYEVTDAPLNVAIEGNAYFQVVLPNGDIAYSANGEW 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 + DG +V++ G + V + + I + L Sbjct: 121 QRDGDGQIVTSDGYLLEPAIVIPEDGTDITISSTGQVYVSQPGDDEAQEIGQIELVRFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + T+++G LE SN + EM +I + + Sbjct: 181 PAGLRAIGRNLFRETAASGDPQIGNPGDDGFPTLQQGILERSNVQVVEEMVNLIVAQRAY 240 Query: 221 NSITTLIDENEKSMLEA 237 + + I ++ + A Sbjct: 241 EANSKTIQTADRLLEVA 257 >gi|94500243|ref|ZP_01306776.1| flagellar basal-body rod protein FlgG [Oceanobacter sp. RED65] gi|94427542|gb|EAT12519.1| flagellar basal-body rod protein FlgG [Oceanobacter sp. RED65] Length = 261 Score = 178 bits (450), Expect = 8e-43, Method: Composition-based stats. Identities = 46/260 (17%), Positives = 95/260 (36%), Gaps = 20/260 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M ++ + A + L+T+++N++N T GF+ + F +++ I+ Sbjct: 1 MHSALWVSKTGLNAQDHGLTTISNNLANVSTTGFKKDRAVFEDLIYQIQRQPGALSSQDS 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V GS T LD A+ G +F + P I TRDG F Sbjct: 61 RLPSGLQLGTGVKVAGTQKIHTTGSLEETSQPLDLAINGRGFFQIALPDGQIAYTRDGTF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 + +G++V++ G ++ V + I + + Sbjct: 121 HMDAEGNIVNSQGYLLEPNITIPDQTNTMTISRDGIVSVTQFGDTTPQEIGQIDVVDFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + E ++++GFLE+SN + EM +MI + + + Sbjct: 181 PTGLQAVGGNLFLETAASGAPEIGVASEDGFGSIEQGFLENSNVKVVEEMVKMITVQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRN 240 + ++ ++ + +N Sbjct: 241 EMNSKVVSSADQMLQYLAQN 260 >gi|224531677|ref|ZP_03672309.1| flagellar basal-body rod protein FlgG [Borrelia valaisiana VS116] gi|224511142|gb|EEF81548.1| flagellar basal-body rod protein FlgG [Borrelia valaisiana VS116] Length = 265 Score = 178 bits (450), Expect = 8e-43, Method: Composition-based stats. Identities = 48/263 (18%), Positives = 95/263 (36%), Gaps = 23/263 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + + A + + T+A+N+SN +T GF+ I+ +F +++ ++ Sbjct: 1 MMRALWTAASGMTAQQYNVDTIANNLSNVNTTGFKKIRAEFEDLIYQTQDRAGTPATENT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 + E G ST D A+EGD ++ + P G TRDG F Sbjct: 61 LRPLGNQVGHGTKIAATHRIFEQGKMQSTNLLTDVAIEGDGFYKILLPDGTYAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNV---GEKGEISQKGKVIATMGLYSV 163 K+ + LV++ G + ++ I I + K + + + + + + Sbjct: 121 KIDSNRELVTSQGYKVLPNIFFPEEYIQNSITISDQGIVSVKIDNNNEPIELGQIEISRF 180 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 G ++ +K+G LE SN + EM MI + Sbjct: 181 VNPAGLSAIGSNLFKETAGSGQEIAGIPGTEGMGRLKQGILEMSNVSIAEEMVTMIVAQR 240 Query: 219 KFNSITTLIDENEKSMLEAIRNI 241 + + I ++ + N+ Sbjct: 241 AYEINSKAIQTSDNMLG-IANNL 262 >gi|92114096|ref|YP_574024.1| flagellar basal-body rod FlgG [Chromohalobacter salexigens DSM 3043] gi|91797186|gb|ABE59325.1| Flagellar basal-body rod FlgG [Chromohalobacter salexigens DSM 3043] Length = 260 Score = 178 bits (450), Expect = 8e-43, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 89/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S + + +L +++N+SN T GF+ + F +++ Sbjct: 1 MIRSLWTAKTGLESQQVKLDVISNNLSNVSTNGFKRSRPVFEDLLYQNVRQPGAQASAVD 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V G +T D A+ G +FA++ P G TRDG F Sbjct: 61 TLPSGLQVGTGVRPVATERLHTQGGLQNTDNSKDLAINGQGFFAVQMPDGTSAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 ++ ++G +V+A G + + + V + + + L Sbjct: 121 QIDENGQMVTAGGYPLDPPIVIPENALSVSISQDGVVSVTQPGDTAAQEVGQLTLSKFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + P + +G++E SN N + EM MI + + Sbjct: 181 PAGLQSMGENLYQETDASGPRNDLIPGMEGAGRLYQGYVETSNVNVVEEMVSMIETQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + ++ +++ + + Sbjct: 241 EINSKAVETSDQMLSRLTQ 259 >gi|114320059|ref|YP_741742.1| flagellar basal-body rod protein FlgG [Alkalilimnicola ehrlichii MLHE-1] gi|114226453|gb|ABI56252.1| flagellar basal-body rod protein FlgG [Alkalilimnicola ehrlichii MLHE-1] Length = 261 Score = 178 bits (450), Expect = 8e-43, Method: Composition-based stats. Identities = 51/261 (19%), Positives = 91/261 (34%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + + A + R+ V++N++N +T GF+ + F +++ + Sbjct: 1 MNPALWVAKTGLDAQQTRMQVVSNNLANVNTTGFKKDRANFEDLIYQTVRQAGGQSTQDT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + V G+ T LD A+EGD +F + P I +RDG F Sbjct: 61 LLPTGLNLGTGVRVTSTEKIHMQGNIQQTENSLDIAIEGDGFFQILMPDGEIAYSRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 V D G +V++SG + + V + + + + L Sbjct: 121 NVDDQGQMVTSSGYQLQPPINIPDDAVSVTIGRDGTVSARLPGQADPQQLGNIQLADFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + P + T+ +G LE SN N E+ MI + F Sbjct: 181 PAGLDAMGGNLFRETAASGPPQISDPGLDGVGTLLQGALESSNVNIAEELVNMIETQRAF 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + T I ++ + NI Sbjct: 241 ETNTKAISSTDQMLQFINNNI 261 >gi|315636319|ref|ZP_07891569.1| flagellar basal-body rod protein FlgG [Arcobacter butzleri JV22] gi|315479408|gb|EFU70091.1| flagellar basal-body rod protein FlgG [Arcobacter butzleri JV22] Length = 262 Score = 178 bits (450), Expect = 8e-43, Method: Composition-based stats. Identities = 43/263 (16%), Positives = 92/263 (34%), Gaps = 21/263 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M A++ ++ ++N++N +T GF+ + +F +++ N Sbjct: 1 MIRGLYTAATGMNAMQHQIDVTSNNIANVNTTGFKKDRAEFQDLMYESLNYTAGRTTQTT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 V G STG LD A+ G +F + P +R+G F Sbjct: 61 LNPTGIDVGLGVRISNIQKEFTEGDLKSTGNPLDIAIAGKGFFQITLPSGETAYSRNGNF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFN-VGEKGEISQKGKVIATMGLYSVDM 165 K+ ++G++V+ +G ++ V K + + + L Sbjct: 121 KLNEEGTIVNGNGYPLQPEIVVPNNVKDISVGTDGLVTAKDPQTGDTIELGQITLADFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G +S + P+ + ++K+ LE SN + EM +I + + Sbjct: 181 PAGLTPLGDSLFMQSEASGPVVEGDPTTEQFGSLKQSMLESSNVKLVNEMVDLITAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNIAS 243 + + I + + + + S Sbjct: 241 EANSKAITTADNMLD-IVNRLKS 262 >gi|78043762|ref|YP_359848.1| flagellar basal-body rod protein FlgG [Carboxydothermus hydrogenoformans Z-2901] gi|77995877|gb|ABB14776.1| flagellar basal-body rod protein FlgG [Carboxydothermus hydrogenoformans Z-2901] Length = 261 Score = 178 bits (450), Expect = 8e-43, Method: Composition-based stats. Identities = 51/258 (19%), Positives = 102/258 (39%), Gaps = 19/258 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M S G++ + + ++ VA+N+SN +T+G+++ +V F +++ N S+V Sbjct: 1 MIRSLYSGISGLKSHQYKMDVVANNISNVNTIGYKSSRVNFEDLIYQKTNQSGVYPSYVG 60 Query: 61 SGKEY----LSKEVGSFISTGTELDFALEGDAWFALESP--RGIILTRDGRFKVTDDGSL 114 G G STG LD A++G+ +F L+ P +R+G F + DG L Sbjct: 61 LGVNVSGVDTIFTQGGLKSTGRPLDVAIQGNGFFVLKDPVTTRTYYSREGVFYLDKDGYL 120 Query: 115 VSASGKYPV------LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 ++ G + + + + + + + +GL S + Sbjct: 121 INGHGYRVQDVNGADIQINNPEAVVTLTIQNDGQIKLVRSDGTTEFAGPIGLMSFKNPET 180 Query: 169 FVRRENSGISPNIP-------PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221 R + S I P + G+LE SN + E +MI + + Sbjct: 181 LERIGQNVYSATIDTQTSFSSPVTPGQQGQGILVSGYLEMSNVDLASEFTEMIVTQRGYQ 240 Query: 222 SITTLIDENEKSMLEAIR 239 + +I +++ + E + Sbjct: 241 ANARVITTSDQMLEELLN 258 >gi|83647171|ref|YP_435606.1| flagellar basal body rod protein FlgG [Hahella chejuensis KCTC 2396] gi|83635214|gb|ABC31181.1| Flagellar basal body rod protein [Hahella chejuensis KCTC 2396] Length = 261 Score = 178 bits (450), Expect = 8e-43, Method: Composition-based stats. Identities = 47/261 (18%), Positives = 93/261 (35%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + L T+++N++N +T GF+ + F +++ IK Sbjct: 1 MHGALWVSKTGLAAQDTALKTISNNLANVNTTGFKRDRAVFQDLLYQIKRQPGGQSSQDT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+ T LD A+ G +F + P I TRDG+F Sbjct: 61 QLPSGLQLGTGVRVVGTQKVFSEGNLEVTEQPLDIAINGRGFFQILMPDGTISYTRDGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 + DG +V+A+G + + V + + + Sbjct: 121 HLNSDGDVVTANGFPLEPGITVPDGALHLTISTDGVVSVTVAGTATPTQVGNINTVDFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G N+ ++ + TV++G +E SN + EM MI + + Sbjct: 181 PAGLEAIGNNLFRETAASGDPQEGTPGLAGLGTVEQGMVETSNVEIVEEMVNMITTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 ++ ++ + +N+ Sbjct: 241 EMNAKVVTTADQMLQYITQNL 261 >gi|188587423|ref|YP_001918968.1| flagellar basal-body rod protein FlgG [Natranaerobius thermophilus JW/NM-WN-LF] gi|179352110|gb|ACB86380.1| flagellar basal-body rod protein FlgG [Natranaerobius thermophilus JW/NM-WN-LF] Length = 265 Score = 177 bits (449), Expect = 9e-43, Method: Composition-based stats. Identities = 52/264 (19%), Positives = 96/264 (36%), Gaps = 24/264 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G + A ++ + V++N++N +T G++ + +F +++ A D Sbjct: 1 MFRSLWTGASGMNAQQKNMDVVSNNLANANTTGYKNSRAEFQDLIYATLERPDGPDDLGD 60 Query: 54 ---------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRD 103 Q + GS T + D A+EGD +F +E + TRD Sbjct: 61 DGRSTPAGIQIGHGAKNSATLRDFSTGSMQETEQDFDLAIEGDGFFIIEGTEGEEYYTRD 120 Query: 104 GRFKVTDDGSLVSASGKYPV-LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162 G FK+ +G+LV++ G + D + I + + S Sbjct: 121 GSFKIDGEGNLVTSDGLHVQSFDGEIPQEATNVSITEEGRVIATLEDGETDEIGEIEIAS 180 Query: 163 VDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLT 217 G + ++ S +++GFLE SN N EM MI Sbjct: 181 FINPAGLEAQGSNLYSATAASGDASVGLPGENGRGQLQQGFLEGSNVNIAEEMVNMITAQ 240 Query: 218 QKFNSITTLIDENEKSMLEAIRNI 241 + + + + I ++ M N+ Sbjct: 241 RAYETNSKSIQSTDEMM-SIANNL 263 >gi|197285508|ref|YP_002151380.1| flagellar basal-body rod protein [Proteus mirabilis HI4320] gi|227355999|ref|ZP_03840391.1| flagellar basal-body rod protein (distal rod protein) [Proteus mirabilis ATCC 29906] gi|194682995|emb|CAR43442.1| flagellar basal-body rod protein (distal rod protein) [Proteus mirabilis HI4320] gi|227163987|gb|EEI48889.1| flagellar basal-body rod protein (distal rod protein) [Proteus mirabilis ATCC 29906] Length = 260 Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats. Identities = 45/259 (17%), Positives = 92/259 (35%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + + +++N++N T GF+ + F +++ Sbjct: 1 MIRSLWIAKTGLDAQQTNMDVISNNLANVSTNGFKRQRAVFEDLLYQTIRQPGAMTSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V G+ T D A++G +F ++ P G TRDG F Sbjct: 61 NAPSGLQIGTGVRPVATERLHSQGNLAQTNGTRDVAIKGQGFFHVQLPDGTDAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 ++ +G LV++SG V + V + E S + + + L + Sbjct: 121 QMDQNGQLVTSSGFQIVPAIILPETAKKVMVGRDGIVSVEIEGSPAPQQVGQLTLTTFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + +G++E SN N E+ MI + + Sbjct: 181 DSGLESVGENLYLETASSGAPTENAPGINGAGLLYQGYVETSNVNVAEELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + I +++ + + + Sbjct: 241 EINSKAISTSDQMLQKLTQ 259 >gi|256751339|ref|ZP_05492218.1| flagellar basal-body rod protein FlgG [Thermoanaerobacter ethanolicus CCSD1] gi|256749721|gb|EEU62746.1| flagellar basal-body rod protein FlgG [Thermoanaerobacter ethanolicus CCSD1] Length = 266 Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats. Identities = 60/266 (22%), Positives = 110/266 (41%), Gaps = 25/266 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + + +A+N++N +T F+ + +F +++ + Sbjct: 1 MMRALWSAASGMTAQQLNVDVIANNLANVNTTAFKRDRAEFKDLIYQTLQRENVYGGQGK 60 Query: 54 ----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKV 108 Q V GS T LD AL+G+ +FA+ P + TRDG FK+ Sbjct: 61 PVNMQVGVGVRLSAIVKDFTGGSLQQTDNPLDLALDGEGFFAVLGPDGKVYYTRDGSFKL 120 Query: 109 TDDGS--LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK-----VIATMGLY 161 + +G+ ++ + YPVLD + PI ++ +V G IS K +AT+G+Y Sbjct: 121 SPNGNNLMLVTADGYPVLDDSGNPIVFDSTEKDISVSPMGVISVKNPDGTTQEVATLGIY 180 Query: 162 SVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + +QG + ++ P + V +GFLE SN + EM MI Sbjct: 181 NFVNTQGLLSVGSNLYEPTEASGQPGTRDDFEGRMGKVMQGFLETSNIQIVKEMVDMIAA 240 Query: 217 TQKFNSITTLIDENEKSMLEAIRNIA 242 + + + I ++ + N+ Sbjct: 241 QRAYEINSKAIQAADEMLG-IANNLR 265 >gi|312148533|gb|ADQ31192.1| flagellar basal-body rod protein FlgG [Borrelia burgdorferi JD1] Length = 265 Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats. Identities = 50/263 (19%), Positives = 92/263 (34%), Gaps = 23/263 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + + A + + T+A+N+SN +T GF+ I+ +F +++ N Sbjct: 1 MMRALWTAASGMTAQQYNVDTIANNLSNVNTTGFKKIRAEFEDLIYQTHNRAGTPATENT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 E G ST D A+EGD ++ + P G TRDG F Sbjct: 61 LRPLGNQVGHGTKIAATQRIFEQGKMQSTNLLTDVAIEGDGFYKILLPDGTYAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF---NVGEKGEISQKGKVIATMGLYSV 163 K+ + LV+ G + ++ I I V K + S + + + + Sbjct: 121 KIDSNRELVTNQGYKVLPNILFPEEYIQNSITISEEGIVSVKIDTSNEPIELGQIEISRF 180 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 G ++ +++G LE SN + EM MI + Sbjct: 181 INPAGLSAIGSNLFKETAGSGQEIAGIPGSEGMGRLRQGILEMSNVSIAEEMVTMIVAQR 240 Query: 219 KFNSITTLIDENEKSMLEAIRNI 241 + + I ++ + N+ Sbjct: 241 AYEINSKAIQTSDNMLG-IANNL 262 >gi|15639944|ref|NP_219397.1| flagellar basal body rod protein FlgG [Treponema pallidum subsp. pallidum str. Nichols] gi|189026183|ref|YP_001933955.1| flagellar basal body rod protein FlgG [Treponema pallidum subsp. pallidum SS14] gi|3323281|gb|AAC65915.1| flagellar basal-body rod protein (flgG-1) [Treponema pallidum subsp. pallidum str. Nichols] gi|189018758|gb|ACD71376.1| flagellar basal-body rod protein [Treponema pallidum subsp. pallidum SS14] gi|291060315|gb|ADD73050.1| flagellar basal-body rod protein FlgG [Treponema pallidum subsp. pallidum str. Chicago] Length = 264 Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 51/260 (19%), Positives = 90/260 (34%), Gaps = 22/260 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ------ 54 M S + + TVA+N++N +T GF+ + +F +++ Sbjct: 1 MVRSLWTAATGMNGQQANIDTVANNLANVNTSGFKRQRAEFEDLLYQTIRTAGTPATEDT 60 Query: 55 -------KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 V E GS TG D A+ G+ +F + G TRDG F Sbjct: 61 LTPVGVRMGHGVKLAATQRLFEQGSLQHTGVSGDVAIAGEGFFRVLQYDGTYAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI---SQKGKVIATMGLYSV 163 KV + LV+++G V ++ + I G + + LY Sbjct: 121 KVDAERQLVTSNGLRLVPEIIFPENYVEHSIAISKDGRVTVRVGEQGDPVEVGQLELYRF 180 Query: 164 DMSQGFVRRENS-GISPNIPPTPLE----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 + G + P+ V+ FLE SN +++ EM MI + Sbjct: 181 ANNAGLAAEGGNVFTQTPASGQPIPGRPGFEGFGKVEHKFLEMSNVSTVSEMVNMIVAQR 240 Query: 219 KFNSITTLIDENEKSMLEAI 238 + + I ++ + A+ Sbjct: 241 AYEFNSKAIQTSDNMLGTAV 260 >gi|268317781|ref|YP_003291500.1| flagellar basal-body rod protein FlgG [Rhodothermus marinus DSM 4252] gi|262335315|gb|ACY49112.1| flagellar basal-body rod protein FlgG [Rhodothermus marinus DSM 4252] Length = 262 Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 54/259 (20%), Positives = 99/259 (38%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + A + + +A N++N +T GF+ +V F +++ Q+ Sbjct: 1 MLRALRTAALGMNAQQTNVDNIAHNLANANTTGFKNARVVFQDLLYQTVQTPGQEEAEGL 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 S VA GS + TG LD A+ GD +F + P I+ TRDG F Sbjct: 61 TPPASLQLGSGVAVVATVRQFTQGSLVETGNALDLAINGDGFFQIRRPDGTIVYTRDGTF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 + DG+ V+ +G +++ P I + V + + + I + L Sbjct: 121 TLNADGTFVTQTGLPLEPELSVPPDTIEIHISQDGVVSVRLQGETESVEIGRLELARFPN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + TVK+GFLE +N + + EM +I + + Sbjct: 181 PAGLRAIGGNLYEQTEASGFPILGAPGEEGFGTVKQGFLEAANVDVVQEMVNLITAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + ++ E+ + A + Sbjct: 241 EINSKMVTTTEEMLQTASQ 259 >gi|167038784|ref|YP_001661769.1| hypothetical protein Teth514_0111 [Thermoanaerobacter sp. X514] gi|300913631|ref|ZP_07130948.1| fagellar hook-basal body protein [Thermoanaerobacter sp. X561] gi|307723354|ref|YP_003903105.1| fagellar hook-basal body protein [Thermoanaerobacter sp. X513] gi|166853024|gb|ABY91433.1| protein of unknown function DUF1078 domain protein [Thermoanaerobacter sp. X514] gi|300890316|gb|EFK85461.1| fagellar hook-basal body protein [Thermoanaerobacter sp. X561] gi|307580415|gb|ADN53814.1| fagellar hook-basal body protein [Thermoanaerobacter sp. X513] Length = 266 Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 60/266 (22%), Positives = 110/266 (41%), Gaps = 25/266 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + + +A+N++N +T F+ + +F +++ + Sbjct: 1 MMRALWSAASGMTAQQLNVDVIANNLANVNTTAFKRDRAEFKDLIYQTLQRENVYGGQGK 60 Query: 54 ----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKV 108 Q V GS T LD AL+G+ +FA+ P + TRDG FK+ Sbjct: 61 PVNMQVGVGVRPSAIVKDFTEGSLQQTENPLDLALDGEGFFAVLGPDGKVYYTRDGSFKL 120 Query: 109 TDDGS--LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK-----VIATMGLY 161 + +G+ ++ + YPVLD + PI ++ +V G IS K +AT+G+Y Sbjct: 121 SPNGNNLMLVTADGYPVLDDSGNPIVFDSTEKDISVSPMGVISVKNPDGTTQEVATLGIY 180 Query: 162 SVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + +QG + ++ P + V +GFLE SN + EM MI Sbjct: 181 NFVNTQGLLSVGSNLYEPTEASGQPGTRDDFEGRMGKVMQGFLETSNIQIVKEMVDMIAA 240 Query: 217 TQKFNSITTLIDENEKSMLEAIRNIA 242 + + + I ++ + N+ Sbjct: 241 QRAYEINSKAIQAADEMLG-IANNLR 265 >gi|90021853|ref|YP_527680.1| flagellar basal body rod protein FlgG [Saccharophagus degradans 2-40] gi|89951453|gb|ABD81468.1| Flagellar basal-body rod FlgG [Saccharophagus degradans 2-40] Length = 261 Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 51/261 (19%), Positives = 98/261 (37%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + RL+T+A+N++N TVGF+ + F +++ I+ Sbjct: 1 MHAALYVSKTGLAAQDTRLTTIANNLANASTVGFKRDRAVFEDLLYQIQRQPGAQTTEET 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 Q + V GS TG LD A++G + + P G + TRDG+F Sbjct: 61 QLPSGLQLGTGVRVVGTQKQFTPGSLQVTGQSLDVAIDGRGFIPVLQPDGTVSYTRDGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI-ATMGLYSVDM 165 + G +V+ASG + V + V+ + + Sbjct: 121 HLDGQGQVVNASGLLIQPAITIPDNAETVTIGTDGVVSASVRGEPAPVVLGNLQIVDFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + ++K+G LE+SN + + EM MI + + Sbjct: 181 PAGLQAIGGNLFLETASSGNPIQGTPGENGLGSIKQGMLENSNVDIVEEMVNMITTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + ++ +++ + +NI Sbjct: 241 EMNSKVVSTSDQMLQFITQNI 261 >gi|225551864|ref|ZP_03772807.1| flagellar basal-body rod protein FlgG [Borrelia sp. SV1] gi|225371659|gb|EEH01086.1| flagellar basal-body rod protein FlgG [Borrelia sp. SV1] Length = 265 Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 49/263 (18%), Positives = 93/263 (35%), Gaps = 23/263 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + + A + + T+A+N+SN +T GF+ I+ +F +++ N Sbjct: 1 MMRALWTAASGMTAQQYNVDTIANNLSNVNTTGFKKIRAEFEDLIYQTHNRAGTPATENT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 E G ST D A+EGD ++ + P G TRDG F Sbjct: 61 LRPLGNQVGHGTKIAATQRIFEQGKMQSTNLLTDVAIEGDGFYKILLPDGTYAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF---NVGEKGEISQKGKVIATMGLYSV 163 K+ + LV++ G + ++ I I V K + + + + + + Sbjct: 121 KIDSNRELVTSQGYKVLPNIFFPEEYIQNSIAISEEGIVSVKIDNNNEPIELGQIEISRF 180 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 G ++ +++G LE SN + EM MI + Sbjct: 181 VNPAGLSAIGSNLFKETAGSGQEIAGIPGSEGMGRLRQGILEMSNVSIAEEMVTMIVAQR 240 Query: 219 KFNSITTLIDENEKSMLEAIRNI 241 + + I ++ + N+ Sbjct: 241 AYEINSKAIQTSDNMLG-IANNL 262 >gi|116331368|ref|YP_801086.1| flagellar basal body rod protein FlgG [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116125057|gb|ABJ76328.1| Endoflagellar distal basal body rod protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 264 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 54/261 (20%), Positives = 94/261 (36%), Gaps = 23/261 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55 S +A + + T+++N++N +T GF+ + F ++V + Sbjct: 1 MRSLWTAATGMIAQQFHIDTISNNLANVNTTGFKKNRADFEDLVYQHQVLAGTPATSVSE 60 Query: 56 -------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRF 106 V + E+GSF +TG +LD A+ G+ F +RDG F Sbjct: 61 IPTGVNVGHGVRAAASQKLFEIGSFQATGNKLDMAITGEMGFFKIQMPDGSFAFSRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI---SQKGKVIATMGLYSV 163 K+ + +V+++G + I I GE + VI + LY Sbjct: 121 KIDSNQQVVTSNGYLLEPPLILPEGAILNTLMISEQGEVTVKVGADIRPIVIGQVELYRF 180 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 G + + P V +GFLE SN + EM MI + Sbjct: 181 VNPAGLQAIGKNLFQETVASGPEIPGTPGMEGFGNVLQGFLEMSNVKIVEEMVAMIVAQR 240 Query: 219 KFNSITTLIDENEKSMLEAIR 239 + S + I ++ + AI Sbjct: 241 AYESNSKAIQTSDNMLSTAIS 261 >gi|217076897|ref|YP_002334613.1| flagellar basal-body rod protein FlgG [Thermosipho africanus TCF52B] gi|217036750|gb|ACJ75272.1| flagellar basal-body rod protein FlgG [Thermosipho africanus TCF52B] Length = 261 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 45/256 (17%), Positives = 96/256 (37%), Gaps = 19/256 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M A + +L T+++N++N DT G++ +K +F +++ + Sbjct: 1 MINGLYTAATGMWAQQFKLDTLSNNIANVDTAGYKKVKSEFQDLLYDYSKNAGAATAQNS 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRF 106 G+ TG LD A+ GD +F ++ I TRDG+F Sbjct: 61 LHPTGLYVGHGTKLSATTRIFTQGNLERTGNSLDLAISGDGFFQIQLQDGRIAYTRDGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 K+ +G +++++G ++ + + + + T+ L Sbjct: 121 KIDGNGRIITSNGNLLSPNIVVPQNAVSLSISPDGIVTAELQDGTLQNLGTITLVRFINP 180 Query: 167 QGFVRRENSGI-SPNIPPTPLE----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221 G ++ TP+E ++ +G++E SN + + EM MI + + Sbjct: 181 SGLKAIGDNLFLETPASGTPVEGTAGQDGFGSILQGYVEKSNVDIVKEMVDMISAMRAYE 240 Query: 222 SITTLIDENEKSMLEA 237 + I ++ + A Sbjct: 241 LNSRTIQTADEMLRTA 256 >gi|224534580|ref|ZP_03675156.1| flagellar basal-body rod protein FlgG [Borrelia spielmanii A14S] gi|224514257|gb|EEF84575.1| flagellar basal-body rod protein FlgG [Borrelia spielmanii A14S] Length = 265 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 49/263 (18%), Positives = 93/263 (35%), Gaps = 23/263 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + + A + + T+A+N+SN +T GF+ I+ +F +++ +N Sbjct: 1 MMRALWTAASGMTAQQYNVDTIANNLSNVNTTGFKKIRAEFEDLIYQTQNRAGTPATENT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 E G ST D A+EGD ++ + P G TRDG F Sbjct: 61 LRPLGNQVGHGTKIAATQRIFEQGKMQSTNLLTDIAIEGDGFYKILLPDGTYAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNV---GEKGEISQKGKVIATMGLYSV 163 K+ + LV++ G + ++ I I K + S + + + + Sbjct: 121 KIDSNRELVTSQGYKVLPNIFFPEEYIQNSITISEQGIVSVKIDNSNEPIELGQIEISRF 180 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 G ++ +++G LE SN + EM MI + Sbjct: 181 VNPAGLNAIGSNLFKETAGSGQEIAGIPGSEGMGRLRQGILEMSNVSIAEEMVTMIVAQR 240 Query: 219 KFNSITTLIDENEKSMLEAIRNI 241 + + I ++ + N+ Sbjct: 241 AYEINSKAIQTSDNMLG-IANNL 262 >gi|297543693|ref|YP_003675995.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296841468|gb|ADH59984.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 251 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 55/253 (21%), Positives = 107/253 (42%), Gaps = 15/253 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG-----------AIK 49 M + + + + + +N++N +T G++ V S Sbjct: 1 MLRGLYAASSGMVTQTKIMDVLTNNLANVNTTGYKRDIVITSSFPNFEVTRYGGDNVPPD 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109 I + + + + E GSF T +LDFA++G+ +F +++P G TRDG F ++ Sbjct: 61 GKIGKMDYGILIDTFHTNFEEGSFTQTNGKLDFAIDGNGFFVIDTPNGQRYTRDGSFVLS 120 Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169 +DG LV+ G I +V E G I G+++ + + D G Sbjct: 121 NDGYLVTQEGYIVQ----GENGPIELSQGDISVDEMGNIKNNGQLVDRLRIVDFDNYDGL 176 Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 + N+ + + +K+GFLE SN NS+ EM MI + + + S ++ Sbjct: 177 RKEGNNLFFIDNSANVQVIPATGRIKQGFLEQSNVNSVKEMVNMISVMRNYESNQKVVIA 236 Query: 230 NEKSMLEAIRNIA 242 ++++ +A+ + Sbjct: 237 FDETLGKAVNEVG 249 >gi|296274032|ref|YP_003656663.1| flagellar basal-body rod protein FlgG [Arcobacter nitrofigilis DSM 7299] gi|296098206|gb|ADG94156.1| flagellar basal-body rod protein FlgG [Arcobacter nitrofigilis DSM 7299] Length = 263 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 50/263 (19%), Positives = 98/263 (37%), Gaps = 21/263 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + A + ++ ++N+SN +T GF+ + +F +++ N Sbjct: 1 MIKGMYTAASGMYAQQHQIDVTSNNISNVNTAGFKKDRAEFEDLMYQRLNYTGGSTSQDT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 S V S E G TG +LD A+EG +F + P TR+G+F Sbjct: 61 RNPTGIDVGSGVRISGIQKSFEEGDLEPTGNDLDIAIEGKGFFRVTLPNGETAYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFN-VGEKGEISQKGKVIATMGLYSVDM 165 KV DGS+V+ +G ++ + +Q+ + + + L Sbjct: 121 KVNSDGSIVNGNGYLLDPEIVIPDNLTKINISNDGLITATDPTTQEEQEVGQITLSDFVN 180 Query: 166 SQGFVRRENSGI-SPNIPPTPLEDLS----GVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G S + P++ +++GF+E SN + EM +I + + Sbjct: 181 PAGLAPMGESLFRATTASGDPIDANPTEEQFGNLRQGFVEMSNVKLVSEMVDLITAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNIAS 243 + + I +K + + + Sbjct: 241 EANSKAIQTADKLL-TIANQLKT 262 >gi|121596119|ref|YP_988015.1| flagellar basal-body rod protein FlgG [Acidovorax sp. JS42] gi|222112274|ref|YP_002554538.1| flagellar basal-body rod protein flgg [Acidovorax ebreus TPSY] gi|120608199|gb|ABM43939.1| flagellar basal-body rod protein FlgG [Acidovorax sp. JS42] gi|221731718|gb|ACM34538.1| flagellar basal-body rod protein FlgG [Acidovorax ebreus TPSY] Length = 260 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 52/259 (20%), Positives = 98/259 (37%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S I A + +L ++ N++N T GF+ F +++ + + Sbjct: 1 MMNSLWIAKTGMTAQQTQLDVISHNLANVSTTGFKRNNAVFEDLIYQNLRQVGSQTTEEN 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 V + GS +G LD A++G+ +F ++ P G TRDG F Sbjct: 61 QLPTGLHLGLGVNVVATSRNFTQGSLQQSGNSLDVAIDGNGFFEVQLPDGTTGYTRDGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 K+ G +V++SG + E V + + I +G+ S Sbjct: 121 KLDSQGRVVTSSGLPVAPGITVPADAKSISISERGMVSVTVAGNPNPQQIGQLGMSSFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 S G + + + T +K+GFLE+SN N + E+ MI + + Sbjct: 181 SAGLEPVGQNLYRESAASGAPQQAEPGTNGLGIIKQGFLENSNVNVVEELVTMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + I +++ + + + Sbjct: 241 EMNSKAIQTSDQMLAKLSQ 259 >gi|307718427|ref|YP_003873959.1| flagellar hook-basal body complex protein [Spirochaeta thermophila DSM 6192] gi|306532152|gb|ADN01686.1| flagellar hook-basal body complex protein [Spirochaeta thermophila DSM 6192] Length = 280 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 54/277 (19%), Positives = 105/277 (37%), Gaps = 36/277 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51 M + IG + + R+ +A+N++N D G++ F E++ ND Sbjct: 1 MIRGYYIGASGMASQLNRMDAIANNLANVDLTGYKRDTAIFKAFPELLIRRMNDRYFKIP 60 Query: 52 ---------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTR 102 + + + V + + Y E G T FALEG +F + +P+G TR Sbjct: 61 WGSIDNTPVVGKLGTGVETNEVYTVFEQGPLKETKDPFHFALEGQGFFTVLTPQGERYTR 120 Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGE--------------- 147 +G F + +G LV+ G V + + I+ + Sbjct: 121 NGSFILGPEGLLVTKEGYPVVGENGLIRIKANNFVVDEDGRIFQNARFAEDPDRLVALEE 180 Query: 148 -ISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE--DLSGVTVKRGFLEDSNA 204 + +++ + + +V + ++ +S E V++GFLE SN Sbjct: 181 NEWDETELVDRLKIVNVRRPRYLQKQGDSLWRTTRESGEAEILQEGRPKVRQGFLEGSNV 240 Query: 205 NSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 N + EM QMI + + + + I+ + + I + Sbjct: 241 NPVTEMVQMIEVNRAYEANQKTIETQDTLLGRLINEV 277 >gi|304317903|ref|YP_003853048.1| flagellar basal-body rod protein FlgG [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302779405|gb|ADL69964.1| flagellar basal-body rod protein FlgG [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 266 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 59/266 (22%), Positives = 102/266 (38%), Gaps = 25/266 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + + +++N++N +T F+ + +F +++ D Sbjct: 1 MIRALWSAASGMNAQQLNVDVISNNLANVNTTSFKRDRAEFQDLMYQTLQTEDVNAGQGK 60 Query: 54 ----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFK- 107 Q V GS T LD AL+G+ +FA+ P TRDG FK Sbjct: 61 PVNMQVGVGVRPSAIVKDFSEGSLQETDNPLDVALDGEGFFAVLGPDGNTYYTRDGSFKL 120 Query: 108 -VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG-----KVIATMGLY 161 V + + ++ + YPVLD PI + ++ G IS K + IAT+G+Y Sbjct: 121 SVDQNTATLTTADGYPVLDDGGNPITFDSTQKDISISPLGVISVKNPDGTQQDIATLGIY 180 Query: 162 SVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + G + + N+ V +GFLE SN + EM MI Sbjct: 181 NFQNPNGLLNKGNNLYEATAASGAPGTRDDFQGKMGNVVQGFLETSNVQVVNEMVNMIAA 240 Query: 217 TQKFNSITTLIDENEKSMLEAIRNIA 242 + + + I + + N+ Sbjct: 241 QRAYELNSKAIQAADDML-SIANNLR 265 >gi|229544402|ref|ZP_04433460.1| protein of unknown function DUF1078 domain protein [Bacillus coagulans 36D1] gi|229324887|gb|EEN90564.1| protein of unknown function DUF1078 domain protein [Bacillus coagulans 36D1] Length = 254 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 52/251 (20%), Positives = 92/251 (36%), Gaps = 12/251 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------KNDIDQ 54 M S G++ + L T+ +N++N +T G++ +V F + + Q Sbjct: 1 MLRSLYSGVSGMKNFQTELDTIGNNIANVNTYGYKKGRVTFKDAISQTLASATPGTSAQQ 60 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSL 114 G GS STG LDFA+ GD +F + TR G F D+ L Sbjct: 61 VGLGSQIGSIDTVDTSGSPESTGRPLDFAITGDGYFRVADGNNTYYTRAGNFYFDDNRRL 120 Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174 V++ G + + Q G I T+ + + G + Sbjct: 121 VNSEGFTVLGTNGQAITLGANVKSFSVATDGTITDQDGNTIGTISIATFQNPAGLTKVGG 180 Query: 175 SGISPNIPP------TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228 + + + T+K G+LE SN + E+ MI + F + T +I Sbjct: 181 NLYTTTNSNAGTVTVSQPGQNGAGTIKSGYLEMSNVDLSEELTNMIVAERGFQANTRIIT 240 Query: 229 ENEKSMLEAIR 239 +++ + E + Sbjct: 241 TSDEILQELVN 251 >gi|300311354|ref|YP_003775446.1| flagellar basal-body rod protein FlgG [Herbaspirillum seropedicae SmR1] gi|300074139|gb|ADJ63538.1| flagellar basal-body rod FlgG protein [Herbaspirillum seropedicae SmR1] Length = 260 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 91/259 (35%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + +L +++N++N T GF+ + F +++ Sbjct: 1 MIRSLWISKTGLDAQQTQLDVISNNLANVSTNGFKRSRAVFEDLLYQTVRQPGAQSSQQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+ T + D A++G+ +F + P TRDG F Sbjct: 61 QLPSGLQIGTGVRPVATERIFTQGNVNQTNNDKDLAIQGNGFFQILLPDGTTAYTRDGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQKGKVIATMGLYSVDM 165 + G LV++SG + V + S I T+ + + Sbjct: 121 QTDSQGQLVTSSGYTLQPPITVPLNTTKLTVGRDGVVSIMQAGSTATTQIGTIQVATFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 G R + + T + +G++E SN N + E+ MI + + Sbjct: 181 PAGLESRGENLYMETAASGAPNPNNPGTNGAGALWQGYVETSNVNVVEELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + I +++ + + + Sbjct: 241 EINSKAITTSDQMLAKLSQ 259 >gi|325982369|ref|YP_004294771.1| flagellar basal-body rod protein FlgG [Nitrosomonas sp. AL212] gi|325531888|gb|ADZ26609.1| flagellar basal-body rod protein FlgG [Nitrosomonas sp. AL212] Length = 260 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 47/259 (18%), Positives = 90/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + +L +A+N++N +T GF+ + F +++ Sbjct: 1 MIRSLWISKTGLEAQQTKLDVIANNLANVNTNGFKRSRAVFEDLMYQTLRQPGAQSSQQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G T D A+ G +F + P TRDG F Sbjct: 61 QLPSGLQLGTGVKPVATESIFTQGIIQPTDNPRDVAIRGLGFFQVLMPDGTTAYTRDGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 ++ +G LV++SG + P V S + + L S Sbjct: 121 QLDLNGQLVTSSGYMVQPAIVVPPNTQTVTVGRDGTVSATVPGSNVPIQLGNIQLASFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + T + +GF+E SN + + E+ MI + + Sbjct: 181 PSGLQKMGENLYMETASSGTPNQNAPGTNGLGILDQGFVETSNVSVVEELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + I+ +++ + + + Sbjct: 241 EMNSKSIETSDQMLQKLAQ 259 >gi|30248324|ref|NP_840394.1| flagellar basal body rod protein FlgG [Nitrosomonas europaea ATCC 19718] gi|30138210|emb|CAD84218.1| Flagella basal body rod protein [Nitrosomonas europaea ATCC 19718] Length = 260 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 50/259 (19%), Positives = 94/259 (36%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + ++ +A+N++N T GF+ ++ F +++ Sbjct: 1 MVRSLWISKTGLDAQQTKMDVIANNLANISTNGFKRMRPVFEDLLYQTIRQPGAQSSERT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V G+ TG D A++G+ +F + P G TRDG F Sbjct: 61 RLPSGLQLGTGVRPVATENIFLQGNLQQTGNTRDVAIQGEGFFQILLPDGTLAYTRDGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 + DG +V+ASG + P + V S + + L + Sbjct: 121 QSDQDGQMVTASGFPLQPSITIPPNTLNITIGRDGTVSVLTPGSALPVPVGNIQLTTFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 G R + + T + +GF+E SN N + E+ +MI + + Sbjct: 181 PAGLQRFGENLYLETMSSGVPNPGIPGTNGIGLLNQGFVETSNVNVVEELVEMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + I +++ + + Sbjct: 241 EINSRSISTSDQMLARLTQ 259 >gi|32266580|ref|NP_860612.1| flagellar basal body rod protein FlgG [Helicobacter hepaticus ATCC 51449] gi|32262631|gb|AAP77678.1| flagellar distal rod protein FlgG [Helicobacter hepaticus ATCC 51449] Length = 262 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 47/257 (18%), Positives = 96/257 (37%), Gaps = 22/257 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S L + ++ ++N++N +T G++ + +F+++ + Sbjct: 1 MMRSLYTASTGMLGQQLQIDNTSNNIANVNTTGYKKQRAEFADLFYQVLQYAGTSTSETT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 V G T LD A+ G+ +F +E P I TR G F Sbjct: 61 ISPTGIEVGIGVRPVAIQKMFSQGHPKETENNLDIAITGNGFFQIELPDGNIAYTRAGSF 120 Query: 107 KVTDDGSLVSASGKY--PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 K+ +DG++V+A G P L + QI + +G ++ ++ + + + Sbjct: 121 KLDNDGNVVNAEGYRLIPELTIPEGATQINIGTDGTVSVIEGNQTEVN-ILGQIEIVNFI 179 Query: 165 MSQGFVRRENSGIS-PNIPPTPLED----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G ++ N P+ +++GFLE SN + EM +I + Sbjct: 180 NPAGLHSLGDNLFINTNASGDPVAGVPGLDGFGQLRQGFLELSNVKLVEEMTDLITGQRA 239 Query: 220 FNSITTLIDENEKSMLE 236 + + + I + + Sbjct: 240 YEANSKTIQTADSMLQT 256 >gi|289577406|ref|YP_003476033.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter italicus Ab9] gi|289527119|gb|ADD01471.1| flagellar basal-body rod protein FlgF [Thermoanaerobacter italicus Ab9] Length = 251 Score = 176 bits (445), Expect = 3e-42, Method: Composition-based stats. Identities = 54/253 (21%), Positives = 106/253 (41%), Gaps = 15/253 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG-----------AIK 49 M + + + + + +N++N +T G++ V S Sbjct: 1 MLRGLYAASSGMVTQIKIMDVLTNNLANVNTTGYKRDIVITSSFPNFEVTRYGGDNIPPD 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109 I + + + + E GS T +LDFA++G+ +F +++P G TRDG F ++ Sbjct: 61 GKIGKMDYGILIDTFHTNFEEGSLTQTNGKLDFAIDGNGFFVIDTPNGQRYTRDGSFVLS 120 Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169 +DG LV+ G I +V E G I G+++ + + D G Sbjct: 121 NDGYLVTQEGYIVQ----GENGPIELLQGDISVDEMGNIINNGQLVDRLRIVDFDNYDGL 176 Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 + N+ + + +K+GFLE SN NS+ EM MI + + + S ++ Sbjct: 177 RKEGNNLFFIDNSANVQVIPATGRIKQGFLEQSNVNSVKEMVNMISVMRNYESNQKVVIA 236 Query: 230 NEKSMLEAIRNIA 242 ++++ +A+ + Sbjct: 237 FDETLGKAVNEVG 249 >gi|74317650|ref|YP_315390.1| flagellar basal body rod protein FlgG [Thiobacillus denitrificans ATCC 25259] gi|74057145|gb|AAZ97585.1| flagellar basal body rod protein FlgG [Thiobacillus denitrificans ATCC 25259] Length = 260 Score = 176 bits (445), Expect = 3e-42, Method: Composition-based stats. Identities = 47/259 (18%), Positives = 89/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + ++ +++N++N T GF+ + F +++ Sbjct: 1 MIRSLWIAKTGLDAQQTQMDVISNNLANVSTSGFKRARAVFEDLLYQTIRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 Q + V G+ TG D A++G+ +F + P G TRDG F Sbjct: 61 QLPSGLQIGTGVKPVATERIFTQGNLQQTGNAKDVAIQGNGFFQVLMPDGTTSYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 +G LV+ASG + V S I T+ L Sbjct: 121 MADANGQLVTASGYAVQPAITIPADTQTLTIGRDGTVSVTQPGSATPVTIGTLQLAMFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + + +G++E SN N + E+ MI + + Sbjct: 181 PAGLQSLGENLYAETAASGTPSSSAPGSNGAGLLNQGYVETSNVNVVEELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + I +++ + + Sbjct: 241 EINSKAIQTSDQMLQRLTQ 259 >gi|17989431|ref|NP_542064.1| flagellar basal body rod protein FlgG [Brucella melitensis bv. 1 str. 16M] gi|23499916|ref|NP_699356.1| flagellar basal body rod protein FlgG [Brucella suis 1330] gi|62317103|ref|YP_222956.1| flagellar basal body rod protein FlgG [Brucella abortus bv. 1 str. 9-941] gi|83269095|ref|YP_418386.1| flagellar basal body rod protein FlgG [Brucella melitensis biovar Abortus 2308] gi|148557926|ref|YP_001257213.1| flagellar basal body rod protein FlgG [Brucella ovis ATCC 25840] gi|161620236|ref|YP_001594122.1| flagellar basal body rod protein FlgG [Brucella canis ATCC 23365] gi|163844346|ref|YP_001622001.1| flagellar basal body rod protein FlgG [Brucella suis ATCC 23445] gi|189022368|ref|YP_001932109.1| flagellar basal body rod protein FlgG [Brucella abortus S19] gi|225628625|ref|ZP_03786659.1| flagellar basal-body rod protein FlgG [Brucella ceti str. Cudo] gi|237816665|ref|ZP_04595657.1| flagellar basal-body rod protein FlgG [Brucella abortus str. 2308 A] gi|254691412|ref|ZP_05154666.1| flagellar basal body rod protein FlgG [Brucella abortus bv. 6 str. 870] gi|254695290|ref|ZP_05157118.1| flagellar basal body rod protein FlgG [Brucella abortus bv. 3 str. Tulya] gi|254702576|ref|ZP_05164404.1| flagellar basal body rod protein FlgG [Brucella suis bv. 3 str. 686] gi|254706292|ref|ZP_05168120.1| flagellar basal body rod protein FlgG [Brucella pinnipedialis M163/99/10] gi|254711414|ref|ZP_05173225.1| flagellar basal body rod protein FlgG [Brucella pinnipedialis B2/94] gi|254720610|ref|ZP_05182421.1| flagellar basal body rod protein FlgG [Brucella sp. 83/13] gi|254731833|ref|ZP_05190411.1| flagellar basal body rod protein FlgG [Brucella abortus bv. 4 str. 292] gi|256029956|ref|ZP_05443570.1| flagellar basal body rod protein FlgG [Brucella pinnipedialis M292/94/1] gi|256043073|ref|ZP_05446017.1| flagellar basal body rod protein FlgG [Brucella melitensis bv. 1 str. Rev.1] gi|256059608|ref|ZP_05449806.1| flagellar basal body rod protein FlgG [Brucella neotomae 5K33] gi|256111943|ref|ZP_05452894.1| flagellar basal body rod protein FlgG [Brucella melitensis bv. 3 str. Ether] gi|256158118|ref|ZP_05456036.1| flagellar basal body rod protein FlgG [Brucella ceti M490/95/1] gi|256252928|ref|ZP_05458464.1| flagellar basal body rod protein FlgG [Brucella ceti B1/94] gi|256256598|ref|ZP_05462134.1| flagellar basal body rod protein FlgG [Brucella abortus bv. 9 str. C68] gi|260544341|ref|ZP_05820162.1| flagellar basal body rod protein [Brucella abortus NCTC 8038] gi|260564303|ref|ZP_05834788.1| flagellar basal body rod protein [Brucella melitensis bv. 1 str. 16M] gi|260568516|ref|ZP_05838985.1| flagellar basal body rod protein [Brucella suis bv. 4 str. 40] gi|260757026|ref|ZP_05869374.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 6 str. 870] gi|260759602|ref|ZP_05871950.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 4 str. 292] gi|260882836|ref|ZP_05894450.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 9 str. C68] gi|261215659|ref|ZP_05929940.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 3 str. Tulya] gi|261220019|ref|ZP_05934300.1| flagellar basal-body rod protein FlgG [Brucella ceti B1/94] gi|261313736|ref|ZP_05952933.1| flagellar basal-body rod protein FlgG [Brucella pinnipedialis M163/99/10] gi|261319022|ref|ZP_05958219.1| flagellar basal-body rod protein FlgG [Brucella pinnipedialis B2/94] gi|261323577|ref|ZP_05962774.1| flagellar basal-body rod protein FlgG [Brucella neotomae 5K33] gi|261753156|ref|ZP_05996865.1| flagellar basal-body rod protein FlgG [Brucella suis bv. 3 str. 686] gi|265985650|ref|ZP_06098385.1| flagellar basal-body rod protein FlgG [Brucella sp. 83/13] gi|265986975|ref|ZP_06099532.1| flagellar basal-body rod protein FlgG [Brucella pinnipedialis M292/94/1] gi|265989511|ref|ZP_06102068.1| flagellar basal-body rod protein FlgG [Brucella melitensis bv. 1 str. Rev.1] gi|265993390|ref|ZP_06105947.1| flagellar basal-body rod protein FlgG [Brucella melitensis bv. 3 str. Ether] gi|265996635|ref|ZP_06109192.1| flagellar basal-body rod protein FlgG [Brucella ceti M490/95/1] gi|297249954|ref|ZP_06933655.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 5 str. B3196] gi|306838572|ref|ZP_07471409.1| flagellar basal-body rod protein FlgG [Brucella sp. NF 2653] gi|306841049|ref|ZP_07473773.1| flagellar basal-body rod protein FlgG [Brucella sp. BO2] gi|17985308|gb|AAL54328.1| flagellar basal-body rod protein flgg [Brucella melitensis bv. 1 str. 16M] gi|23463493|gb|AAN33361.1| flagellar basal-body rod protein FlgG [Brucella suis 1330] gi|62197296|gb|AAX75595.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 1 str. 9-941] gi|82939369|emb|CAJ12317.1| Flagellar basal body rod protein [Brucella melitensis biovar Abortus 2308] gi|148369211|gb|ABQ62083.1| flagellar basal-body rod protein FlgG [Brucella ovis ATCC 25840] gi|161337047|gb|ABX63351.1| flagellar basal-body rod protein FlgG [Brucella canis ATCC 23365] gi|163675069|gb|ABY39179.1| flagellar basal-body rod protein FlgG [Brucella suis ATCC 23445] gi|189020942|gb|ACD73663.1| Flagellar basal body rod protein [Brucella abortus S19] gi|225616471|gb|EEH13519.1| flagellar basal-body rod protein FlgG [Brucella ceti str. Cudo] gi|237787478|gb|EEP61694.1| flagellar basal-body rod protein FlgG [Brucella abortus str. 2308 A] gi|260097612|gb|EEW81486.1| flagellar basal body rod protein [Brucella abortus NCTC 8038] gi|260151946|gb|EEW87039.1| flagellar basal body rod protein [Brucella melitensis bv. 1 str. 16M] gi|260155181|gb|EEW90262.1| flagellar basal body rod protein [Brucella suis bv. 4 str. 40] gi|260669920|gb|EEX56860.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 4 str. 292] gi|260677134|gb|EEX63955.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 6 str. 870] gi|260872364|gb|EEX79433.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 9 str. C68] gi|260917266|gb|EEX84127.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 3 str. Tulya] gi|260918603|gb|EEX85256.1| flagellar basal-body rod protein FlgG [Brucella ceti B1/94] gi|261298245|gb|EEY01742.1| flagellar basal-body rod protein FlgG [Brucella pinnipedialis B2/94] gi|261299557|gb|EEY03054.1| flagellar basal-body rod protein FlgG [Brucella neotomae 5K33] gi|261302762|gb|EEY06259.1| flagellar basal-body rod protein FlgG [Brucella pinnipedialis M163/99/10] gi|261742909|gb|EEY30835.1| flagellar basal-body rod protein FlgG [Brucella suis bv. 3 str. 686] gi|262550932|gb|EEZ07093.1| flagellar basal-body rod protein FlgG [Brucella ceti M490/95/1] gi|262764260|gb|EEZ10292.1| flagellar basal-body rod protein FlgG [Brucella melitensis bv. 3 str. Ether] gi|263000180|gb|EEZ12870.1| flagellar basal-body rod protein FlgG [Brucella melitensis bv. 1 str. Rev.1] gi|264659172|gb|EEZ29433.1| flagellar basal-body rod protein FlgG [Brucella pinnipedialis M292/94/1] gi|264664242|gb|EEZ34503.1| flagellar basal-body rod protein FlgG [Brucella sp. 83/13] gi|297173823|gb|EFH33187.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 5 str. B3196] gi|306288938|gb|EFM60238.1| flagellar basal-body rod protein FlgG [Brucella sp. BO2] gi|306406358|gb|EFM62600.1| flagellar basal-body rod protein FlgG [Brucella sp. NF 2653] Length = 262 Score = 176 bits (445), Expect = 3e-42, Method: Composition-based stats. Identities = 48/262 (18%), Positives = 90/262 (34%), Gaps = 21/262 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55 + I A + L +A+N++N +T GF+ + +F++++ + Sbjct: 1 MKALTIAATGMNAQQLNLEVIANNIANINTTGFKRARAEFTDLLYQSERTAGVPNQANQA 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 V + GSF TG D AL G WF ++SP + TR G F Sbjct: 61 IVPEGALVGLGVQTAAVRNLHIQGSFNQTGNPYDVALTGRGWFQIQSPTGETLYTRAGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE-KGEISQKGKVIATMGLYSVDM 165 DG LV+ G + P I K + + + L + Sbjct: 121 NKNADGQLVTLDGNPVEPAITIPPDAIEVTITDTGQVFAKLQDQINQVDLGQLTLANFTN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + ++K+G+LE SN + + E+ +I + + Sbjct: 181 EAGLEPLGGNLYRETEASGGPLVGVPGDPGYGSIKQGYLEASNVDPVKEITDLITAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNIA 242 + +I ++ +N+ Sbjct: 241 EMNSKVIQAADEMAATVSKNLR 262 >gi|284007173|emb|CBA72457.1| flagellar basal-body rod protein FlgG [Arsenophonus nasoniae] Length = 260 Score = 176 bits (445), Expect = 3e-42, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 93/259 (35%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + + +++N++N T GF+ + F +++ Sbjct: 1 MIRSLWIAKTGLDAQQTNMDVISNNLANVSTNGFKRGRAVFQDLMYQTLRQPGSLTSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V G+ T D A++G +F ++ P G TRDG F Sbjct: 61 LSPSGLQLGTGVRPIATQRLHSQGNLSQTNGSTDVAIKGQGFFHIQLPDGTDAYTRDGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V + V+A G V + + V + + + + + L + Sbjct: 121 QVDQNNQRVTAGGFAVVPPIVLPETALKVTISHDGIVSVVIPGNSEPQQVGQLALTTFVN 180 Query: 166 SQGFVRRENSGI-SPNIPPTPLEDLSGVT----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + N P+E GV + +G++E SN N E+ MI + + Sbjct: 181 ETGLESIGENLYLETNSSGVPVETAPGVNGAGLLYQGYVETSNVNVAEELVSMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + ++ Sbjct: 241 EINSKAVSTSDQMLQRLMQ 259 >gi|182412221|ref|YP_001817287.1| flagellar basal-body rod protein FlgG [Opitutus terrae PB90-1] gi|177839435|gb|ACB73687.1| flagellar basal-body rod protein FlgG [Opitutus terrae PB90-1] Length = 261 Score = 176 bits (445), Expect = 3e-42, Method: Composition-based stats. Identities = 51/259 (19%), Positives = 95/259 (36%), Gaps = 21/259 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S A + L+T+A+N++N +T GF+ K++F +++ Sbjct: 1 MNLSLYSAATGMEAQQLNLNTIANNLANVNTPGFKRSKIEFQDLLYQKPTRASGTDSGGG 60 Query: 54 -------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGR 105 + + G STG +LD A++GD +F ++ P G TRDG Sbjct: 61 NIVPTGLEVGNGSRVAATSKVFTQGQLTSTGEKLDLAIQGDGFFEIQRPDGTFAYTRDGS 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 FK+ G +V+ G PVL + I + G+ G + + Sbjct: 121 FKLNAQGQVVTIDG-LPVLSGFQAIPAGTEGVAISDNGQVTLTGANGTTTFRLSVTRFAN 179 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + E + +G++E SN N + EM +I + + Sbjct: 180 PSGLRSVGGNLYEETAASGTPEIGQPGEQGYGQIMQGYIESSNVNIVEEMVNLIVAQRAY 239 Query: 221 NSITTLIDENEKSMLEAIR 239 + I +++ + + Sbjct: 240 EINSKSIQTSDEMLQNVAQ 258 >gi|295097201|emb|CBK86291.1| flagellar basal-body rod protein FlgG, Gram-negative bacteria [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 260 Score = 176 bits (445), Expect = 3e-42, Method: Composition-based stats. Identities = 45/259 (17%), Positives = 93/259 (35%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + + +++N++N +T GF+ + F +++ Sbjct: 1 MIRSLWIAKTGLEAQQTNMDVISNNLANVNTNGFKRQRAVFQDLLYQTMRQPGAQASEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G TG + D A+EG +F ++ P TRDG F Sbjct: 61 TLPSGLQLGTGVRPVSTQRVHTQGGLNMTGNDTDVAIEGKGFFQVQLPDGSTAYTRDGHF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 ++G LV+A G + + + Q V + + + + L + Sbjct: 121 DKNENGQLVNAEGHPILPGVVVPQDAKEMQISPDGIVSVTLPGQAQPQQVGQLTLATFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + +L+ T+K+ ++E SN N E+ MI + + + Sbjct: 181 DAGLESIGGNLYRETQSSGAPNELNPGLEDAGTLKQKYIETSNVNVAEELVNMIQVQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + Sbjct: 241 EINSKAVSASDQMLQRLTQ 259 >gi|150020364|ref|YP_001305718.1| flagellar basal-body rod protein FlgG [Thermosipho melanesiensis BI429] gi|149792885|gb|ABR30333.1| flagellar basal-body rod protein FlgG [Thermosipho melanesiensis BI429] Length = 261 Score = 176 bits (445), Expect = 3e-42, Method: Composition-based stats. Identities = 43/258 (16%), Positives = 95/258 (36%), Gaps = 19/258 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M A + +L T+++N++N DT G++ +K +F +++ + Sbjct: 1 MINGLYTAATGMWAQQFKLDTLSNNIANVDTAGYKKVKTEFQDLLYDYSKNAGAATAQNS 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRF 106 G+ TG LD A+ GD +F ++ I TRDG+F Sbjct: 61 IHPTGLYVGHGTKLSATTRIFTQGNLERTGNSLDIAISGDGFFQIQLQDGRIAYTRDGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 K+ +G +++++G ++ + + + + T+ L Sbjct: 121 KIDGNGRIITSNGNLLSPNIVVPQNAVAINISPDGIVTAELQDGTLQNLGTITLVRFINP 180 Query: 167 QGFVRRENSGI-SPNIPPTPLE----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221 G ++ P+E ++ +G++E SN + + EM MI + + Sbjct: 181 SGLKAIGDNLYLETPASGAPVEGTAGQDGFGSILQGYVEKSNVDIVKEMVDMISAMRAYE 240 Query: 222 SITTLIDENEKSMLEAIR 239 + + ++ + A Sbjct: 241 LNSRTVQTADEMLRTASN 258 >gi|219685570|ref|ZP_03540386.1| flagellar basal-body rod protein FlgG [Borrelia garinii Far04] gi|219672848|gb|EED29871.1| flagellar basal-body rod protein FlgG [Borrelia garinii Far04] Length = 265 Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats. Identities = 49/263 (18%), Positives = 93/263 (35%), Gaps = 23/263 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + + A + + T+A+N+SN +T GF+ I+ +F +++ +N Sbjct: 1 MMRALWTAASGMTAQQYNVDTIANNLSNVNTTGFKKIRAEFEDLIYQTQNRAGTPATENT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 E G ST D A+EGD ++ + P G TRDG F Sbjct: 61 LRPLGNQVGHGTKIAATQRIFEQGKMQSTNLLTDVAIEGDGFYKILLPNGTYAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNV---GEKGEISQKGKVIATMGLYSV 163 K+ + LV++ G + ++ I I K + S + + + + Sbjct: 121 KIDSNRELVTSQGYKVLPNIFFPEEYIQNSITISEQGIVSVKIDNSNEPIELGQIEISRF 180 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 G ++ +++G LE SN + EM MI + Sbjct: 181 VNPAGLSAIGSNLFKETAGSGQEITGIPGSEGMGILRQGILEMSNVSIAEEMVTMIVAQR 240 Query: 219 KFNSITTLIDENEKSMLEAIRNI 241 + + I ++ + N+ Sbjct: 241 AYEINSKAIQTSDNMLG-IANNL 262 >gi|260466625|ref|ZP_05812813.1| flagellar basal-body rod protein FlgF [Mesorhizobium opportunistum WSM2075] gi|259029631|gb|EEW30919.1| flagellar basal-body rod protein FlgF [Mesorhizobium opportunistum WSM2075] Length = 240 Score = 175 bits (444), Expect = 4e-42, Method: Composition-based stats. Identities = 100/243 (41%), Positives = 151/243 (62%), Gaps = 4/243 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M+ S + L+AQ+ALE+RL T+ADN++N +TVGFR VKF +VV + +SF + Sbjct: 1 MRDSLYVALSAQMALERRLDTIADNVANANTVGFRATGVKFEDVVS---GTGQKSVSFAS 57 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 SGK YLS G TG DFA++GDAWFA+++P G ++TRDGRF + ++G L+S G Sbjct: 58 SGKTYLSGAHGPLNETGNPFDFAIQGDAWFAIDTPAGPVMTRDGRFSMNENGELMSIEG- 116 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 +PVLD PIQ+ ++ G G + Q +++ ++GLY+ D FVR NSGI P Sbjct: 117 HPVLDAGGAPIQLDPRNGPPKAGADGSLRQNDQLVGSIGLYNFDPGVNFVRYGNSGIVPA 176 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 P P+ D S V + +GF+E+SN N + EM ++I + + F + L+ + + S EAI+ Sbjct: 177 RTPEPVTDRSDVGIAQGFVEESNVNPVLEMTRLIMVQRAFENTAALMRQTDSSTDEAIKT 236 Query: 241 IAS 243 + S Sbjct: 237 LGS 239 >gi|332800000|ref|YP_004461499.1| flagellar basal-body rod protein FlgG [Tepidanaerobacter sp. Re1] gi|332697735|gb|AEE92192.1| flagellar basal-body rod protein FlgG [Tepidanaerobacter sp. Re1] Length = 270 Score = 175 bits (444), Expect = 4e-42, Method: Composition-based stats. Identities = 54/270 (20%), Positives = 102/270 (37%), Gaps = 29/270 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + + ++N++N +T GF+ + +F +++ D Sbjct: 1 MMRALWSASSGMQAQQLNMDITSNNLANVNTAGFKKSRAEFKDLLYETLQRPDSPELLSG 60 Query: 54 -------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGR 105 Q V G+ TG D A+EG +F +E P + TRDG Sbjct: 61 AAVPVGIQVGHGVRPSATGRDFNEGNLQPTGNTFDVAIEGTGFFMVERPDGNLAFTRDGS 120 Query: 106 FKVTDDG---SLVSASGKYPVLDMAS----VPIQIPQKDEIFNVGEKGEISQKGKVIATM 158 FKV+ DG +LV++ G Y + S + + + + + Sbjct: 121 FKVSLDGTDRNLVTSEGYYVLSGDESYITIPEEYTDISISSDGLITGQDEDGTIEELGQI 180 Query: 159 GLYSVDMSQGFVRRENSGISPN------IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQ 212 G+ QG + N+ +P + D T+ +GFLE SN + EM Sbjct: 181 GIVKFLNPQGLLAIGNNLFEATEASGEYVPMEDVSDPGYGTLLQGFLEMSNVQVVEEMVN 240 Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 +I + + T + +++ + +A N+ Sbjct: 241 LIIAQRAYEVNTKAVQASDEMLAQA-NNLR 269 >gi|260893868|ref|YP_003239965.1| fagellar hook-basal body protein [Ammonifex degensii KC4] gi|260866009|gb|ACX53115.1| fagellar hook-basal body protein [Ammonifex degensii KC4] Length = 266 Score = 175 bits (444), Expect = 4e-42, Method: Composition-based stats. Identities = 50/263 (19%), Positives = 96/263 (36%), Gaps = 26/263 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----DIDQKI 56 M S G++ + R+ +A+N++N +T GF+ + F +++ + Q Sbjct: 1 MLRSLFSGVSGLRVHQIRMDVIANNIANINTTGFKAARANFQDILSQTLGRSAVNTTQVG 60 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-------PRGIILTRDGRFKVT 109 V+ G+ +TG LD A+EG+ +F ++ + TRDG F + Sbjct: 61 LGVSLAAIDNIMTQGALQTTGRALDLAIEGNGFFVVKPVDSSGNSVNHPLYTRDGTFYID 120 Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-----EISQKGKVIATMGLYSVD 164 G +V+A G + S K+ +GL + Sbjct: 121 KSGYIVNAQGYRLQSTSNDNIQIADPDKIVSISIGSDGVISVVKSDGTKITYNIGLVTFK 180 Query: 165 MSQGFVRRENSGI---------SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIH 215 + R + + P P D ++ GFLE SN + E MI Sbjct: 181 NPESLQRVGANLWDVTPNVTDPATPTPGAPGTDG-RGYIRSGFLEMSNVDLAQEFTNMII 239 Query: 216 LTQKFNSITTLIDENEKSMLEAI 238 + + + +I +++ + E + Sbjct: 240 TQRGYQANARVITTSDELLRELV 262 >gi|306846278|ref|ZP_07478839.1| flagellar basal-body rod protein FlgG [Brucella sp. BO1] gi|306273273|gb|EFM55142.1| flagellar basal-body rod protein FlgG [Brucella sp. BO1] Length = 262 Score = 175 bits (444), Expect = 4e-42, Method: Composition-based stats. Identities = 48/262 (18%), Positives = 90/262 (34%), Gaps = 21/262 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55 + I A + L +A+N++N +T GF+ + +F++++ + Sbjct: 1 MKALTIAATGMNAQQLNLEVIANNIANINTTGFKRARAEFTDLLYQSERTAGVPNQANQA 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 V + GSF TG D AL G WF ++SP + TR G F Sbjct: 61 IVPEGALVGLGVQTAAVRNLHIQGSFNQTGNPYDVALTGRGWFQIQSPTGETLYTRAGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE-KGEISQKGKVIATMGLYSVDM 165 DG LV+ G + P I K + + + L + Sbjct: 121 NKNADGQLVTLDGNPVEPAITIPPDAIEVTITDTGQVFAKLQDQINQVDLGQLTLANFTN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + ++K+G+LE SN + + E+ +I + + Sbjct: 181 EAGLEPLGGNLYRETEASGSPLVGVPGDPGYGSIKQGYLEASNVDPVKEITDLITAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNIA 242 + +I ++ +N+ Sbjct: 241 EMNSKVIQAADEMAATVSKNLR 262 >gi|328948268|ref|YP_004365605.1| flagellar basal-body rod protein FlgF [Treponema succinifaciens DSM 2489] gi|328448592|gb|AEB14308.1| flagellar basal-body rod protein FlgF [Treponema succinifaciens DSM 2489] Length = 266 Score = 175 bits (444), Expect = 4e-42, Method: Composition-based stats. Identities = 56/263 (21%), Positives = 109/263 (41%), Gaps = 24/263 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIK-------- 49 M + IG + A + RL T+++N++N DT GF+ +FSE++ Sbjct: 1 MIRGWYIGASGMNAQQNRLDTISNNLANVDTTGFKKEIPVNKEFSELLLRRTVADGVYKT 60 Query: 50 --------NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101 + I V + + Y GSF ST T+ D AL G+ +F +++P G T Sbjct: 61 PFGSADAVSIIGSIGLGVETNELYTDFSQGSFKSTDTKTDMALGGEGFFTVQTPAGERYT 120 Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLY 161 R+G F + +G L++ G + + I +P N ++ +++ + + Sbjct: 121 RNGNFHLGKEGILLTKEGYPVLG--ENGAIHVPNDKFFVNQDGMIYTNEDNELVDRIKVV 178 Query: 162 SVDMSQGFVRRENSGISPNI---PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 + + ++ +S + N E + +G+ E SN N + EM QMI + + Sbjct: 179 RFENERFLKKQGSSLWNSNEISGDAYIAEGDERPRLLQGYTEASNVNVVNEMVQMIEVNR 238 Query: 219 KFNSITTLIDENEKSMLEAIRNI 241 + + + + M + Sbjct: 239 AYEANQKSVQTEDSMMDTLWSKV 261 >gi|171059410|ref|YP_001791759.1| flagellar basal-body rod protein FlgG [Leptothrix cholodnii SP-6] gi|170776855|gb|ACB34994.1| flagellar basal-body rod protein FlgG [Leptothrix cholodnii SP-6] Length = 260 Score = 175 bits (444), Expect = 4e-42, Method: Composition-based stats. Identities = 45/257 (17%), Positives = 94/257 (36%), Gaps = 20/257 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + I A + +L V++N++N T G++ F +++ Sbjct: 1 MMRALWISKTGMEAQQTQLDVVSNNLANVATNGYKKSHAVFEDLMYQTLRQSGAASSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 Q V + G+ +G LD A++G+ +F ++ P G TRDG F Sbjct: 61 QLPTGLQVGLGVRTVATSRQFTQGNLQQSGNTLDVAIKGNGFFPIQMPDGTTGYTRDGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165 +V+ G LV+++G + V +V+ + + + Sbjct: 121 QVSATGQLVTSAGYAVQPGITIPADAQTVTIAPDGVVSVALPGQTAPQVLGQLQVANFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + ++ +GFLE SN N + E+ MI + + Sbjct: 181 PAGLEAKGGNLYTETASSGTPNGGAPGSNGLGSLSQGFLETSNVNVVEELVTMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEA 237 + I +++ + + Sbjct: 241 ELNSKAISTSDQMLQKL 257 >gi|254516991|ref|ZP_05129049.1| flagellar basal-body rod protein FlgG [gamma proteobacterium NOR5-3] gi|219674496|gb|EED30864.1| flagellar basal-body rod protein FlgG [gamma proteobacterium NOR5-3] Length = 261 Score = 175 bits (444), Expect = 4e-42, Method: Composition-based stats. Identities = 47/261 (18%), Positives = 95/261 (36%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + ++ST+A+N++N T GF+ + F +++ + Sbjct: 1 MNQSLWISKTGLDAQQTKMSTIANNLANVGTTGFKRGRAIFEDLIYQNVRQVGSQSSQDT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + G+ T + LD A++G +F + P TRDG F Sbjct: 61 LLPSGLQIGTGTRVVATEKLFTQGNLTKTDSALDIAIQGRGFFEILLPDGNQAFTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 ++ D G +V+++G + + V + + I + L Sbjct: 121 QINDQGIVVTSAGYQVQPPITVPQDALSVTIANDGTVSVQQPGTAASTQIGLVQLTDFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G R + + + + T+ +G++E SN N + E+ MI + + Sbjct: 181 PSGLQARGENLFLESGASGAPQPGNPGLNGLGTLSQGYVESSNVNVVEELVNMIETQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + I ++ + N+ Sbjct: 241 EMNSRAISTADQMLQYISNNL 261 >gi|224372657|ref|YP_002607029.1| flagellar basal body rod protein FlgG [Nautilia profundicola AmH] gi|223588586|gb|ACM92322.1| flagellar basal-body rod protein FlgG [Nautilia profundicola AmH] Length = 262 Score = 175 bits (443), Expect = 4e-42, Method: Composition-based stats. Identities = 47/261 (18%), Positives = 103/261 (39%), Gaps = 21/261 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S +A + ++ V++N+SN +T+G++ + +F+++ Sbjct: 1 MVRSLYTAATGMMAQQMQIDVVSNNISNVNTIGYKKQRAEFADLFYQTMEYAGTSTSTTT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 V G+F TG LD A++GD +F ++ P I TRDG F Sbjct: 61 QSPTGINVGLGVRPTAVTKIFSQGNFKETGNNLDVAIQGDGFFQVQLPDGRIAYTRDGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 K+ DG++V++ G + ++ + V + + I + + Sbjct: 121 KLDADGNIVTSDGYKLIPNITLPADTVQVSIGTDGTVSVLEAGQTQMQQIGQIEIAKFIN 180 Query: 166 SQGFVRRENSGIS-PNIPPTPLED----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ P+ +++GF+E SN + EM +I + + Sbjct: 181 PAGLHSLGSNLYIDTTASGDPIVSTPGLDGTGELRQGFVEMSNVQLVEEMTDLITGQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 ++ + I +++ + + + N+ Sbjct: 241 DAASKAIVTSDEML-QTVNNL 260 >gi|219684180|ref|ZP_03539124.1| flagellar basal-body rod protein FlgG [Borrelia garinii PBr] gi|219672169|gb|EED29222.1| flagellar basal-body rod protein FlgG [Borrelia garinii PBr] Length = 265 Score = 175 bits (443), Expect = 5e-42, Method: Composition-based stats. Identities = 49/263 (18%), Positives = 93/263 (35%), Gaps = 23/263 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + + A + + T+A+N+SN +T GF+ I+ +F +++ +N Sbjct: 1 MMRALWTAASGMTAQQYNVDTIANNLSNVNTTGFKKIRAEFEDLIYQTQNRAGTPATENT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 E G ST D A+EGD ++ + P G TRDG F Sbjct: 61 LRPLGNQVGHGTKIAATQRIFEQGKMQSTNLLTDVAIEGDGFYKILMPDGTYAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNV---GEKGEISQKGKVIATMGLYSV 163 K+ + LV++ G + ++ I I K + S + + + + Sbjct: 121 KIDSNRELVTSQGYKVLPNIFFPEEYIQNSITISEQGIVSVKTDNSNEPIELGQIEISRF 180 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 G ++ +++G LE SN + EM MI + Sbjct: 181 VNPAGLSAIGSNLFKETAGSGQEITGIPGSEGMGILRQGILEMSNVSIAEEMVTMIVAQR 240 Query: 219 KFNSITTLIDENEKSMLEAIRNI 241 + + I ++ + N+ Sbjct: 241 AYEINSKAIQTSDNMLG-IANNL 262 >gi|218461633|ref|ZP_03501724.1| flagellar basal body rod protein FlgF [Rhizobium etli Kim 5] Length = 244 Score = 175 bits (443), Expect = 5e-42, Method: Composition-based stats. Identities = 109/242 (45%), Positives = 164/242 (67%), Gaps = 1/242 (0%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 MQ+ + L++Q+ALE+RL+T+ADNM+N +T GFR +VKF E+V A KN ++ K++FV+ Sbjct: 1 MQSGLYVSLSSQMALEKRLNTIADNMANVNTTGFRATEVKFDEMVAATKNKLNTKVAFVS 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 G +YL+++ G TG LDFA++GDAWFAL++P G +LTRDGRF + D G LVS G Sbjct: 61 QGNDYLNEQNGELQHTGNMLDFAIKGDAWFALDTPAGRVLTRDGRFTIKDTGELVSIRGY 120 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 PVLD PIQ+ K VG G I Q G+ + ++GL+ D+S+G++R ENSGI Sbjct: 121 -PVLDAGGAPIQLDTKAGEPAVGTDGVIYQTGRQVGSLGLFEADISKGYLRYENSGIMTT 179 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 P + D V V++G+LE+SN N+M E+ Q+I + + F SI++L+ ++E S EA++ Sbjct: 180 DQPRAVVDRFNVGVEQGYLENSNVNAMREITQLIEVNRAFESISSLMRDSEDSFKEAVQT 239 Query: 241 IA 242 + Sbjct: 240 LG 241 >gi|322421663|ref|YP_004200886.1| flagellar basal-body rod protein FlgF [Geobacter sp. M18] gi|320128050|gb|ADW15610.1| flagellar basal-body rod protein FlgF [Geobacter sp. M18] Length = 238 Score = 175 bits (443), Expect = 5e-42, Method: Composition-based stats. Identities = 56/242 (23%), Positives = 102/242 (42%), Gaps = 6/242 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M L L+ ++RL +++N++N T GF+ +++F ++ ++KN + + Sbjct: 1 MNAGMYAALTGNLSAQRRLDVISNNLANASTTGFKADQIQFESILASVKNS--TEGPVFS 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + + G T LD ALEGD +F + +P+G TR G F G LV+A G Sbjct: 59 NDRYSTDFSSGGLQRTDNALDVALEGDGFFVVNTPQGTAYTRQGNFHRGPGGKLVTADGY 118 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 +V + +G G++S G V+ + + + +G+ Sbjct: 119 EVQGGGGTVTL---NGGSKIEIGSNGQVSVDGNVVGNIAVVDFPKPYAL-EKAGNGLYLP 174 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 P S VK+G+LE SN + EM +MI ++ F + + A + Sbjct: 175 ANPQTATTASTAGVKQGYLESSNVKVVVEMARMIEASRYFEICAKAVKTYDDLNARAAND 234 Query: 241 IA 242 + Sbjct: 235 LG 236 >gi|154249604|ref|YP_001410429.1| flagellar basal-body rod protein FlgG [Fervidobacterium nodosum Rt17-B1] gi|154153540|gb|ABS60772.1| flagellar basal-body rod protein FlgG [Fervidobacterium nodosum Rt17-B1] Length = 261 Score = 175 bits (443), Expect = 5e-42, Method: Composition-based stats. Identities = 50/258 (19%), Positives = 97/258 (37%), Gaps = 19/258 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S + ++ TV++N++N DT G++ IK +F +++ + + Sbjct: 1 MINSLYTAATGMWTQQFKMDTVSNNIANVDTAGYKKIKAEFQDLIYSYSKNAGAATAQNS 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRF 106 V G+ +TG LD A+ GD +F ++ I TRDG+F Sbjct: 61 TTPTGIYVGHGVKLAATTKIFTQGNLENTGNALDLAITGDGFFQIQLQDGRIAYTRDGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 K+ G +V+A+G + + + + + T+ L Sbjct: 121 KLDSQGRVVTANGLLLSPAIVVPQNAVSLTVSPDGIVSVELADGTIQQLGTITLVRFVNP 180 Query: 167 QGFVRRENSGI-SPNIPPTPLE----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221 G ++ N P+E T+ +G++E SN + + EM MI + + Sbjct: 181 AGLKSIGDNLYLQTNASGEPIEGVGGQDGFGTIMQGYVEKSNVDVVKEMVDMITAMRAYE 240 Query: 222 SITTLIDENEKSMLEAIR 239 + I ++ + A Sbjct: 241 FNSRSIITADQMLQTASN 258 >gi|312880335|ref|ZP_07740135.1| flagellar basal-body rod protein FlgG [Aminomonas paucivorans DSM 12260] gi|310783626|gb|EFQ24024.1| flagellar basal-body rod protein FlgG [Aminomonas paucivorans DSM 12260] Length = 262 Score = 175 bits (443), Expect = 6e-42, Method: Composition-based stats. Identities = 48/263 (18%), Positives = 93/263 (35%), Gaps = 23/263 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G +A + L V++N++N +T G++ ++ F +++ I + Sbjct: 1 MIRSLWSGATGMIAQQTNLDVVSNNLANVNTSGYKKVRADFQDLMYQIDREPGAPVEPAS 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q G+ +TG D A+EGD ++ + P G TRDG + Sbjct: 61 MIPTGIQVGLGTRVVGTSRIMGEGNIQTTGNPTDVAIEGDGFYQVTLPDGTLAYTRDGAW 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 ++ +G +V++ G + V + I + L Sbjct: 121 RIDGNGQIVTSDGFLLEPAITIPDNMKELIISTTGQVSVLLPGDPNPQEIGQIQLARFVN 180 Query: 166 SQGFVRRENSGI------SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + I P +D G T+ + LE +N + EM MI + Sbjct: 181 PGGLRASGKNLFLETPASGAPIVGNPGDDGLGATL-QRVLEMANVQVVEEMVNMIVAQRA 239 Query: 220 FNSITTLIDENEKSMLEAIRNIA 242 + + + I ++ + N+ Sbjct: 240 YEANSKTISTADELL-RIANNLR 261 >gi|88811803|ref|ZP_01127057.1| hypothetical protein NB231_05340 [Nitrococcus mobilis Nb-231] gi|88791194|gb|EAR22307.1| hypothetical protein NB231_05340 [Nitrococcus mobilis Nb-231] Length = 261 Score = 175 bits (443), Expect = 6e-42, Method: Composition-based stats. Identities = 54/261 (20%), Positives = 91/261 (34%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + + A + R+STVA+N++N +T GF+ + KF ++V + Sbjct: 1 MNPALWVAKTGLDAQQTRMSTVANNLANVNTTGFKKDRAKFEDLVYQTVRQAGGQSSQNN 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 + V G+ + TG LD A+ G +F + P G TRDG F Sbjct: 61 RLPSGLMLGTGVRVAATQKMFTQGNIVQTGNALDLAINGRGFFEILQPDGTLAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165 ++ D G +V+A G + P S + + L Sbjct: 121 QIDDQGQVVTADGLPLQPAINIPPNAQSVTIGTDGTVSVQLPGSPAPTQVGNLRLTDFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + V+ G LE SN N E+ MI + F Sbjct: 181 PAGLKPIGRNLFVQTGASGAPQPGTPGLNGLGLVQAGALESSNVNIAEELVNMIETQRGF 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + T I ++ + N+ Sbjct: 241 ETNTRAIQTADQMLQFITNNL 261 >gi|303248239|ref|ZP_07334502.1| flagellar basal-body rod protein FlgG [Desulfovibrio fructosovorans JJ] gi|302490377|gb|EFL50288.1| flagellar basal-body rod protein FlgG [Desulfovibrio fructosovorans JJ] Length = 260 Score = 175 bits (442), Expect = 6e-42, Method: Composition-based stats. Identities = 47/257 (18%), Positives = 97/257 (37%), Gaps = 18/257 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S +A++ ++ T+++N++N +TVGF+ + +F +++ Sbjct: 1 MMRSLWTATTGMVAMQMQIDTMSNNLANVNTVGFKKSRAEFEDLMYQTLQVAGTETTGGN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107 Q V + G +TG +LD A++G +F ++ + TR G FK Sbjct: 61 RIPTGLQVGLGVKPTTVHKFFTQGDLQNTGNQLDIAIQGQGFFKVDVNGRELYTRAGSFK 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 + DG++VS+ G + +++ + LY+ Sbjct: 121 LNQDGTIVSSGGYPLQPTFSVPTDTKTITITENGHLSCLDLNGDTLAETDIPLYTFINPS 180 Query: 168 GFVRRENSGISP-----NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222 G + S D + T+ +G+LE SN + EM +I + + + Sbjct: 181 GMTAEGRNLYSTTQASGTANEVTPGDQNAGTLAQGYLEMSNVELVDEMVGLIVGQRAYEA 240 Query: 223 ITTLIDENEKSMLEAIR 239 + I + + A+ Sbjct: 241 NSKAITTADGMLQTAVN 257 >gi|225686012|ref|YP_002733984.1| flagellar basal body rod protein FlgG [Brucella melitensis ATCC 23457] gi|256262865|ref|ZP_05465397.1| flagellar basal body rod protein [Brucella melitensis bv. 2 str. 63/9] gi|225642117|gb|ACO02030.1| flagellar basal-body rod protein FlgG [Brucella melitensis ATCC 23457] gi|263092700|gb|EEZ16909.1| flagellar basal body rod protein [Brucella melitensis bv. 2 str. 63/9] gi|326410335|gb|ADZ67399.1| flagellar basal body rod protein FlgG [Brucella melitensis M28] gi|326553627|gb|ADZ88266.1| flagellar basal body rod protein FlgG [Brucella melitensis M5-90] Length = 262 Score = 175 bits (442), Expect = 6e-42, Method: Composition-based stats. Identities = 48/262 (18%), Positives = 90/262 (34%), Gaps = 21/262 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55 + I A + L +A+N++N +T GF+ + +F++++ + Sbjct: 1 MKALTIAATGMNAQQLNLEVIANNIANINTTGFKRARAEFTDLLYQSERTAGVPNQANQA 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 V + GSF TG D AL G WF ++SP + TR G F Sbjct: 61 IVPEGALVGLGVQTAAVRNLHIQGSFNQTGNPYDVALTGRGWFQIQSPTGETLYTRAGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE-KGEISQKGKVIATMGLYSVDM 165 DG LV+ G + P I K + + + L + Sbjct: 121 NKNADGQLVTLDGNPVEPAITIPPDAIEVTITDTGQVFAKLQDQINQVDLGQLTLANFTN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + ++K+G+LE SN + + E+ +I + + Sbjct: 181 EAGLEPLGGNLYRETEASGGALVGVPGDPGYGSIKQGYLEASNVDPVKEITDLITAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNIA 242 + +I ++ +N+ Sbjct: 241 EMNSKVIQAADEMAATVSKNLR 262 >gi|319764541|ref|YP_004128478.1| flagellar basal-body rod protein flgg [Alicycliphilus denitrificans BC] gi|317119102|gb|ADV01591.1| flagellar basal-body rod protein FlgG [Alicycliphilus denitrificans BC] Length = 260 Score = 175 bits (442), Expect = 6e-42, Method: Composition-based stats. Identities = 48/259 (18%), Positives = 96/259 (37%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S I A + +L ++ N++N T GF+ F +++ + + Sbjct: 1 MINSLWIAKTGMSAQQTQLDVISHNLANVSTTGFKRNSAVFEDLIYQNLRQVGAQTTEEN 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 V + GS + LD A+ G+ +F ++ P G I TRDG F Sbjct: 61 QLPTGLHLGLGVRTVATSRHFTQGSLQQSSNSLDVAINGNGFFEVQLPDGTIGYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 ++ G +V++ G + E V + + + + + + S Sbjct: 121 QLDAQGRMVTSGGLPVANGITVPQGATSISISETGVVSATIAGNAQPQQLGQLAMSSFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 + G + + P + T +K+GFLE SN N + E+ MI + + Sbjct: 181 AAGLQPVGQNMYKESAASGPPQQGQPGTNGLGVIKQGFLETSNVNVVEELVTMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + I +++ + + + Sbjct: 241 EMNSKAIQTSDQMLAKLSQ 259 >gi|256014942|ref|YP_003104951.1| flagellar basal-body rod protein FlgG [Brucella microti CCM 4915] gi|255997602|gb|ACU49289.1| flagellar basal-body rod protein FlgG [Brucella microti CCM 4915] Length = 262 Score = 175 bits (442), Expect = 6e-42, Method: Composition-based stats. Identities = 48/262 (18%), Positives = 90/262 (34%), Gaps = 21/262 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55 + I A + L +A+N++N +T GF+ + +F++++ + Sbjct: 1 MKALMIAATGMNAQQLNLEVIANNIANINTTGFKRARAEFTDLLYQSERTAGVPNQANQA 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 V + GSF TG D AL G WF ++SP + TR G F Sbjct: 61 IVPEGALVGLGVQTAAVRNLHIQGSFNQTGNPYDVALTGRGWFQIQSPTGETLYTRAGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE-KGEISQKGKVIATMGLYSVDM 165 DG LV+ G + P I K + + + L + Sbjct: 121 NKNADGQLVTLDGNPVEPAITIPPDAIEVTITDTGQVFAKLQDQINQVDLGQLTLANFTN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + ++K+G+LE SN + + E+ +I + + Sbjct: 181 EAGLEPLGGNLYRETEASGGPLVGVPGDPGYGSIKQGYLEASNVDPVKEITDLITAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNIA 242 + +I ++ +N+ Sbjct: 241 EMNSKVIQAADEMAATVSKNLR 262 >gi|258592560|emb|CBE68869.1| Flagellar basal-body rod protein flgG (Distal rod protein) [NC10 bacterium 'Dutch sediment'] Length = 262 Score = 175 bits (442), Expect = 6e-42, Method: Composition-based stats. Identities = 48/262 (18%), Positives = 89/262 (33%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + +A A + L +A+N++N +T GF+ ++ F ++ Sbjct: 1 MIRALFSAVAGMQAQQLNLDNIANNLANVNTTGFKRSRLDFQDLFYQTYRPAGASTASGA 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q G T LD +EGD +F + P I TR G F Sbjct: 61 EIPVGIQVGHGSKPIASQRIYIQGDPQQTENPLDLMIEGDGFFQVLRPDGTIAYTRAGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 K +G +V++ G +++ + V + I T+ L Sbjct: 121 KRDANGRVVTSDGFALQPEVSIPAQAMTIHVGSDGVVSATIPGQTASQQIGTIELSRFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + P + T+ +GFLE SN + EM +I + + Sbjct: 181 PAGLQSVGRNLSLPTSASGDPTSGAPGTQGLGTIGQGFLELSNVKVVEEMVNLIMSQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNIA 242 + + + ++ + + NI Sbjct: 241 EAGSKAVQAADEML-QVSNNIR 261 >gi|283850807|ref|ZP_06368093.1| flagellar basal-body rod protein FlgG [Desulfovibrio sp. FW1012B] gi|283573730|gb|EFC21704.1| flagellar basal-body rod protein FlgG [Desulfovibrio sp. FW1012B] Length = 260 Score = 175 bits (442), Expect = 7e-42, Method: Composition-based stats. Identities = 47/257 (18%), Positives = 103/257 (40%), Gaps = 18/257 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S +A++ ++ T+++N++N +TVGF+ + +F +++ + + Sbjct: 1 MMRSLWTATTGMVAMQMQIDTMSNNLANVNTVGFKKSRAEFEDLMYQTQQVAGTETVGGN 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107 V + G +TG +LD A++G+ +F ++ + TR G FK Sbjct: 61 RLPTGLQVGLGVKPTTVHKFFTQGDLQNTGNQLDIAIQGEGFFKVDVNGRDLYTRAGSFK 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 + DG++V+A+G + + + + + LY+ S Sbjct: 121 LNQDGTIVTANGYPLQPAFSVPAGTKSITITENGHLSCLDQNGAAQGETDIPLYTFINSP 180 Query: 168 GFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222 G + S ++++ T+ +GFLE SN + EM +I + + + Sbjct: 181 GLTAEGRNLYSTTQASGDAQEVTPGDQNAGTLAQGFLEMSNVELVDEMVGLIVGQRAYEA 240 Query: 223 ITTLIDENEKSMLEAIR 239 + I + + A+ Sbjct: 241 NSKAITTADGMLQTAVN 257 >gi|255021356|ref|ZP_05293404.1| Flagellar basal-body rod protein flgG [Acidithiobacillus caldus ATCC 51756] gi|254969219|gb|EET26733.1| Flagellar basal-body rod protein flgG [Acidithiobacillus caldus ATCC 51756] Length = 261 Score = 175 bits (442), Expect = 7e-42, Method: Composition-based stats. Identities = 46/261 (17%), Positives = 96/261 (36%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S + + ++ +A+N++N +T GF+ + F +++ Sbjct: 1 MMRSLYVAATGLEGEQTKMDVIANNLANVNTTGFKQSRAVFQDLLYQNLRQPGAQSSQTT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+ STG LD + G +F + P I TRDG F Sbjct: 61 QYPSGLQLGTGVRVVATERLMTQGNLTSTGNALDLGINGQGFFQIMQPDGTIAYTRDGTF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165 ++ + G LV+++G + P + + + ++ L + Sbjct: 121 QLNNQGQLVTSNGYLLQPPVTIPPNAQSITIGTDGTVSVVLPGQSQPQQVGSIQLANFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ + +V++G+LE SN N + E+ MI + + Sbjct: 181 PTGLQSIGDNLYLQTGSSGAPQTGQPTLNGLGSVQQGYLESSNVNVVSELVDMIATQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + + ++ + AI+N+ Sbjct: 241 EINSKAVSTSDSMLGYAIQNL 261 >gi|218673219|ref|ZP_03522888.1| flagellar basal body rod protein FlgF [Rhizobium etli GR56] Length = 244 Score = 174 bits (441), Expect = 7e-42, Method: Composition-based stats. Identities = 107/242 (44%), Positives = 164/242 (67%), Gaps = 1/242 (0%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 MQ+ + L++Q+ALE+RL+T+ADNM+N +T GFR +VKF E+V A KN ++ K++FV+ Sbjct: 1 MQSGLYVSLSSQMALEKRLNTIADNMANVNTTGFRATEVKFDEMVAATKNKLNTKVAFVS 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 G +YL+++ G TG LDFA++GDAWF+L++P G +LTRDGRF + + G LVS G Sbjct: 61 QGNDYLNEQSGELQHTGNMLDFAVKGDAWFSLDTPAGRVLTRDGRFTIKETGELVSIRGY 120 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 PVLD PIQ+ K VG G I Q G+ + ++GL+ D+S+G++R ENSGI Sbjct: 121 -PVLDAGGAPIQLDTKAGEPAVGTDGVIYQAGRQVGSLGLFEADISKGYLRYENSGIMTT 179 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 P + D V V++G+LE+SN N+M E+ Q+I + + F SI++L+ ++E S EA++ Sbjct: 180 DQPRAVVDRFNVGVEQGYLENSNVNAMREITQLIEVNRAFESISSLMRDSEDSFKEAVQT 239 Query: 241 IA 242 + Sbjct: 240 LG 241 >gi|308185371|ref|YP_003929504.1| flagellar basal body rod protein FlgG [Helicobacter pylori SJM180] gi|308061291|gb|ADO03187.1| flagellar basal body rod protein FlgG [Helicobacter pylori SJM180] Length = 262 Score = 174 bits (441), Expect = 8e-42, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 91/261 (34%), Gaps = 21/261 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S + LA + + T ++N++N +T GF+ + F+++ Sbjct: 1 MLRSLYSATSGMLAQQTHIDTTSNNIANVNTTGFKKSRADFNDLFYQAMQYAGTNTSNTT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 V GS T LD A+ G +F ++ P TR G F Sbjct: 61 LSPDGMEVGLGVRPSAITKMFSQGSPKETENNLDIAITGKGFFQVQLPDGTTAYTRSGNF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQKGKVIATMGLYSVDM 165 K+ + G+LV++ G + + + + VI + L + Sbjct: 121 KLDEQGNLVTSEGYLLIPQITLPEDTTQVNIGVDGTVSVTQGLQTTSNVIGQITLANFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ S + +++GFLE SN + EM +I + + Sbjct: 181 PAGLHSMGDNLFSITNASGDAIVGNPDSQGLGKLRQGFLELSNVKLVEEMTDLITAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + + I + + + + ++ Sbjct: 241 EANSKSIQTADAML-QTVNSL 260 >gi|254780685|ref|YP_003065098.1| flagellar basal body rod protein FlgF [Candidatus Liberibacter asiaticus str. psy62] gi|254040362|gb|ACT57158.1| flagellar basal body rod protein FlgF [Candidatus Liberibacter asiaticus str. psy62] Length = 243 Score = 174 bits (441), Expect = 8e-42, Method: Composition-based stats. Identities = 243/243 (100%), Positives = 243/243 (100%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA Sbjct: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK Sbjct: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN Sbjct: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN Sbjct: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 Query: 241 IAS 243 IAS Sbjct: 241 IAS 243 >gi|209547922|ref|YP_002279839.1| flagellar basal body rod protein FlgF [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209533678|gb|ACI53613.1| flagellar basal body rod protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 244 Score = 174 bits (441), Expect = 8e-42, Method: Composition-based stats. Identities = 106/242 (43%), Positives = 162/242 (66%), Gaps = 1/242 (0%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 MQ+ + L++Q+ALE+RL+T+ADNM+N +T GFR +VKF E+V A KN ++ K++FV+ Sbjct: 1 MQSGLYVSLSSQMALEKRLNTIADNMANVNTTGFRATEVKFDEMVAATKNKLNTKVAFVS 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 G +YL++ G TG LDFA++GDAWF+L++P G +LTRDGRF + D G LVS G Sbjct: 61 QGNDYLNESNGELQHTGNMLDFAIKGDAWFSLDTPAGRVLTRDGRFTLKDTGELVSIRGY 120 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 PVLD PIQ+ K VG G I Q + + ++GL+ D+S+G++R ENSGI Sbjct: 121 -PVLDAGGAPIQLNSKGGEPAVGTDGIIYQGDRQVGSLGLFEADISKGYLRYENSGIMTT 179 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 P + D V V++G+LE+SN N+M E+ Q+I + + F S+++L+ ++E S EA++ Sbjct: 180 DQPRAVVDRFNVGVEQGYLENSNVNAMREITQLIEVNRAFESVSSLMRDSEDSFKEAVQT 239 Query: 241 IA 242 + Sbjct: 240 LG 241 >gi|319787119|ref|YP_004146594.1| flagellar basal-body rod protein FlgG [Pseudoxanthomonas suwonensis 11-1] gi|317465631|gb|ADV27363.1| flagellar basal-body rod protein FlgG [Pseudoxanthomonas suwonensis 11-1] Length = 261 Score = 174 bits (441), Expect = 9e-42, Method: Composition-based stats. Identities = 52/261 (19%), Positives = 92/261 (35%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + R+S VA+N++NT+T GF+ + F +++ Sbjct: 1 MNQALWVAKTGLDAQQTRMSVVANNLANTNTTGFKRDRANFEDLLYQQVRQPGGSTSAQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V + G+ TG LD + G +F + P G TRDG F Sbjct: 61 QLPSGLQLGTGVRVVSTAKDFQQGNPQQTGRALDVMINGRGFFEVLMPDGTSAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 +V G LV++SG + + + + I + L Sbjct: 121 QVNAQGELVTSSGYPVQPGIQVPEGAQSMTIGTDGTITVQMAGDGQALEIGALTLTDFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G R + P ++ + V++G LE SN N + E+ MI + + Sbjct: 181 PAGLQARGENLYMETTASGPAQNGTPGLNGLGLVEQGALEGSNVNVVEELVSMIETQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 I + + N+ Sbjct: 241 EMNAKAISTTDSMLGYLNNNV 261 >gi|120613061|ref|YP_972739.1| flagellar basal-body rod protein FlgG [Acidovorax citrulli AAC00-1] gi|326319099|ref|YP_004236771.1| flagellar basal-body rod protein FlgG [Acidovorax avenae subsp. avenae ATCC 19860] gi|120591525|gb|ABM34965.1| flagellar basal-body rod protein FlgG [Acidovorax citrulli AAC00-1] gi|323375935|gb|ADX48204.1| flagellar basal-body rod protein FlgG [Acidovorax avenae subsp. avenae ATCC 19860] Length = 260 Score = 174 bits (441), Expect = 9e-42, Method: Composition-based stats. Identities = 49/259 (18%), Positives = 96/259 (37%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S I A + +L ++ N++N T G++ F +++ + + Sbjct: 1 MINSLWIAKTGMSAQQTQLDVISHNLANVSTTGYKRNNAVFEDLIYQNLRQVGAQTTEQN 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 V + + GS + LD A+ G+ +F + P G TRDG F Sbjct: 61 QLPTGLHLGLGVRTVATSRNFTQGSLAQSNNNLDVAINGNGFFQVTMPDGTTGYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 ++ G LV++SG + V + + I T+G+ S Sbjct: 121 QLDSQGRLVTSSGLPVANGITVPANATGISISTDGIVSATVPGTTAPQQIGTLGMASFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 S G + + + + T +++GFLE SN N + E+ MI + + Sbjct: 181 SAGLEPIGQNLFKESAASGQPQQGTPGTNGLGIIRQGFLETSNVNVVEELVSMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + I +++ + + + Sbjct: 241 EMNSKAIQTSDQMLAKLAQ 259 >gi|83589649|ref|YP_429658.1| hypothetical protein Moth_0797 [Moorella thermoacetica ATCC 39073] gi|83572563|gb|ABC19115.1| conserved hypothetical protein [Moorella thermoacetica ATCC 39073] Length = 253 Score = 174 bits (441), Expect = 9e-42, Method: Composition-based stats. Identities = 55/257 (21%), Positives = 102/257 (39%), Gaps = 20/257 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKN-----DI 52 M + L E R +++N++N T GF++ F E++ I Sbjct: 1 MLRGLYLASTGMLVQEMRQDVISNNLANATTGGFKSAVATVRSFPEMLLQRLEKNQAIPI 60 Query: 53 DQKISFVASGKEYLSKEVGSFISTGTELDFALEGD------AWFALESPRGIILTRDGRF 106 V Y + E G TG D AL A+F + +P G TR+G+F Sbjct: 61 GPFSPGVMVDNIYTNTEPGPLTETGHATDLALVQPGVGVSPAFFVVRTPGGEAYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 +V G LV+A G + I F V G I G+V+ + + + Sbjct: 121 QVDPGGWLVTAEGY----PVQGQNGDIYVGTTDFKVDAGGRILVNGQVVDQLRVVTFANP 176 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 R+ ++ P + VK+G+LE+SN + E+ M+ + + + + + Sbjct: 177 ALLQRQGDTLF--TAPGAQALPAANFQVKQGWLEESNVDLARELVDMLAVLRSYEANQKV 234 Query: 227 IDENEKSMLEAIRNIAS 243 I ++++ +++ + S Sbjct: 235 IQTEDQTLAKSVNEVGS 251 >gi|119503646|ref|ZP_01625729.1| hypothetical protein MGP2080_03865 [marine gamma proteobacterium HTCC2080] gi|119460708|gb|EAW41800.1| hypothetical protein MGP2080_03865 [marine gamma proteobacterium HTCC2080] Length = 261 Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 46/261 (17%), Positives = 95/261 (36%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + +++T+++N++N T GF+ +V F +++ + Sbjct: 1 MSQSLWIAKTGLDAQQTKMATISNNLANAGTNGFKRGRVIFEDLLYQNVRQVGAQSSQDT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + G+ T LD A++G + + P TRDG F Sbjct: 61 VLPSGLQVGTGARVVATERLFTQGNLSQTDNPLDLAIQGRGFVEVLMPDGSQGFTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 ++ D G +V+A+G + + V + + + + + L Sbjct: 121 QINDQGVMVTAAGYQVQPPITIPQDALSISIAPDGTVSVQQPGTPQATQVGVIQLTDFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G R + + T+++GF+E SN N + E+ MI + + Sbjct: 181 PSGLQARGENLFLETGASGAPLPGNPGLNGLGTLQQGFVEGSNVNVVEELVNMIETQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + I ++ + +N+ Sbjct: 241 EMNSKAISTADQMLQYVSQNL 261 >gi|323704840|ref|ZP_08116417.1| flagellar basal-body rod protein FlgF [Thermoanaerobacterium xylanolyticum LX-11] gi|323535766|gb|EGB25540.1| flagellar basal-body rod protein FlgF [Thermoanaerobacterium xylanolyticum LX-11] Length = 248 Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 51/253 (20%), Positives = 104/253 (41%), Gaps = 18/253 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVG--------AIK 49 M + +A ++ + +++N++N +T G++ V F + + Sbjct: 1 MLRGLYTASSGMIAQQKIVDVLSNNIANVNTAGYKKDTVTTMAFPDYMVTRNGGDNVPYN 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109 +I V + G T +LDFA++G +F + +P G+ TRDG F + Sbjct: 61 GNIGTMDYGVLVETFNTNFSEGDIEKTDGKLDFAIDGSGFFTVSTPSGVRYTRDGSFTLN 120 Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169 ++G LV+ G Y + I + +V E G IS G+V+ + + Sbjct: 121 NNGYLVTKDGYYVL----GQNGPIQLNNGDISVDESGNISVNGQVVDKLNIVDFANYNTL 176 Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 + N+ + VK+G+LE SN N + EM MI + + + + Sbjct: 177 RKEGNNLFFTTGG---QAIPATSKVKQGYLEGSNVNPVDEMVTMISAMRTYEANQKSVSA 233 Query: 230 NEKSMLEAIRNIA 242 ++++ +++ + Sbjct: 234 FDETLDKSVNEVG 246 >gi|238755322|ref|ZP_04616665.1| Flagellar basal-body rod protein flgG [Yersinia ruckeri ATCC 29473] gi|238706458|gb|EEP98832.1| Flagellar basal-body rod protein flgG [Yersinia ruckeri ATCC 29473] Length = 260 Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 90/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + + +A+N++N T GF+ + F +++ Sbjct: 1 MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTMRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V G+ T D A++G +F ++ P G TRDG F Sbjct: 61 TLPSGLQIGTGVRPVATERLHSQGNLSKTDNSKDIAIKGQGFFQVQLPDGTNAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 ++ +G LV+ASG + + V + + + + L + Sbjct: 121 QMDQNGQLVTASGFQVQPAITIPANALSITVGRDGIVSVTQQGQTAAQQVGQLTLTTFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + +G++E SN N E+ MI + + Sbjct: 181 DSGLESVGENLYQETASSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + + Sbjct: 241 EINSKAVTTSDQMLQKLTQ 259 >gi|258514011|ref|YP_003190233.1| hypothetical protein Dtox_0696 [Desulfotomaculum acetoxidans DSM 771] gi|257777716|gb|ACV61610.1| protein of unknown function DUF1078 domain protein [Desulfotomaculum acetoxidans DSM 771] Length = 263 Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 54/260 (20%), Positives = 99/260 (38%), Gaps = 23/260 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M S G++ + R+ + +N++N +T G+++ +V+F +V+G Q S V Sbjct: 1 MIRSLYSGVSGMKNHQTRMDVIGNNIANVNTTGYKSSRVQFKDVLGQTIAG-GQVASGVT 59 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI---ILTRDGRFKVTDDGSLVSA 117 GS +T D + G+ +F ++ P TRDG F V D G LV++ Sbjct: 60 IAGINKDFTQGSQTATENSTDLYIHGNGFFIVQDPGDPSILYYTRDGSFHVDDTGQLVNS 119 Query: 118 SGKYPV-------LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170 G +D +VP+ D + S + +GL + + Sbjct: 120 LGYKVCSSDGSTEIDPFTVPLDSINIDMNGKISYCTGGSTTPEDGGQIGLAMFNDLNRLI 179 Query: 171 RRENSGISPNIPPTPLEDLSG------------VTVKRGFLEDSNANSMYEMGQMIHLTQ 218 + N+ + P TV LE SN + E MI + Sbjct: 180 NKGNNLYQYDNKPNTDGSDPAEPIFGAPGSIGLGTVISNNLEMSNVDLTNEFSNMIITQR 239 Query: 219 KFNSITTLIDENEKSMLEAI 238 + + + +I +++ + E I Sbjct: 240 GYQANSKVITTSDEMLQELI 259 >gi|229825258|ref|ZP_04451327.1| hypothetical protein GCWU000182_00611 [Abiotrophia defectiva ATCC 49176] gi|229790630|gb|EEP26744.1| hypothetical protein GCWU000182_00611 [Abiotrophia defectiva ATCC 49176] Length = 274 Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 56/274 (20%), Positives = 104/274 (37%), Gaps = 33/274 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S + +A + L T+++N++N +T GF+T ++F ++ Sbjct: 1 MLRSLWSAASGMMAQQVNLDTISNNIANINTTGFKTQSMEFKSLLYQQLKTKSTDSEGNP 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 Q V + G+ + TG LD ++G+ +FA++ TR+G Sbjct: 61 KPIGVQVGLGVRNASITAKFTQGAALDTGEMLDLFIQGNGFFAVKVGEKTAYTRNGHMVF 120 Query: 109 T--DDGSLVSASGKYPVLDMASVPIQIPQKDEI------------FNVGEKGEISQKGKV 154 + DG ++ S P+L PI+I K + V +K + K Sbjct: 121 SSVADGWELTTSDGNPILSTKGTPIKIDSKWDPKDISIDLSGNVLHRVDDKEAGTTKYDN 180 Query: 155 IATMGLYSVDMSQGFVRRENSGISPN------IPPTPLEDLSGVTVKRGFLEDSNANSMY 208 + LY + G R S L+ +K G+LE SN ++ Sbjct: 181 FGKIALYQFNNPAGLNRSGGSLYYETPASGEARSEDTDAGLNKSLIKSGYLEGSNVSAAD 240 Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 EM MI + + + I +++ + +A N+ Sbjct: 241 EMVNMIVTQRAYQLNSKAITASDEMLEQA-NNLR 273 >gi|222053732|ref|YP_002536094.1| flagellar basal-body rod protein FlgG [Geobacter sp. FRC-32] gi|221563021|gb|ACM18993.1| flagellar basal-body rod protein FlgG [Geobacter sp. FRC-32] Length = 262 Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 87/259 (33%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + + VA+N++N +T GF+ + F +++ Sbjct: 1 MIRALWTAASGMQAQQLNIDVVANNLANVNTTGFKKSRADFHDLMYQSMKTSGAPSTNAT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q G+ TG ELD A+EGD +F ++ P TR G F Sbjct: 61 QIPTGIQVGLGSKPAAVTKIFTTGNVTQTGNELDVAIEGDGFFQIQMPDGSTEYTRAGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 K G +V++ G + ++ V + T+ L + Sbjct: 121 KKDSQGRVVTSEGYPLLPEVVIPNNTTSITIGNDGTVSVIQSGQTSPTSVGTIQLATFSN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + ++ T+ +G+LE SN + EM MI + + Sbjct: 181 PAGLSSQGHNLFKETESSGAATTGTSGQNGIGTLSQGYLEMSNVSVAEEMVNMIVGQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + ++ + A Sbjct: 241 EINSKAVQAADEMLQTANN 259 >gi|332525064|ref|ZP_08401244.1| flagellar basal-body rod protein FlgG [Rubrivivax benzoatilyticus JA2] gi|332108353|gb|EGJ09577.1| flagellar basal-body rod protein FlgG [Rubrivivax benzoatilyticus JA2] Length = 260 Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 46/257 (17%), Positives = 92/257 (35%), Gaps = 20/257 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I + +L +++N++N T GF+ V+F +++ Sbjct: 1 MLRSLWIAKTGMEGQQTKLDVISNNLANVGTNGFKRGGVQFEDLIYQNLRQAGAASSEQS 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 Q V + + G+ TG D A++G+ +F ++ P G TRDG F Sbjct: 61 TLPTGLQVGLGVRAAGTTRNFSQGNLQQTGNSYDIAIKGNGFFQIQMPDGTTGYTRDGGF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 +V + G LV+ G + V + + + L + Sbjct: 121 QVDNAGQLVTNQGYPVQPGITIPADAKTVTVADDGTVQVTTAGNATPTTVGQLQLANFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + T +++GF+E SN N + E+ MI + + Sbjct: 181 PAGLESLGGNLYAETAASGTPNTGTPGTNELGALQQGFVETSNVNVVEELVNMIATQRAY 240 Query: 221 NSITTLIDENEKSMLEA 237 + I +++ + + Sbjct: 241 ELNSKAIQTSDQMLQKL 257 >gi|125975104|ref|YP_001039014.1| protein of unknown function DUF1078-like protein [Clostridium thermocellum ATCC 27405] gi|256003242|ref|ZP_05428234.1| flagellar basal-body rod protein FlgG [Clostridium thermocellum DSM 2360] gi|281418478|ref|ZP_06249497.1| fagellar hook-basal body protein [Clostridium thermocellum JW20] gi|125715329|gb|ABN53821.1| protein of unknown function DUF1078-like protein [Clostridium thermocellum ATCC 27405] gi|255992933|gb|EEU03023.1| flagellar basal-body rod protein FlgG [Clostridium thermocellum DSM 2360] gi|281407562|gb|EFB37821.1| fagellar hook-basal body protein [Clostridium thermocellum JW20] gi|316939269|gb|ADU73303.1| flagellar hook-basal body protein [Clostridium thermocellum DSM 1313] Length = 266 Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 55/265 (20%), Positives = 109/265 (41%), Gaps = 25/265 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + + +A+N+SN +T ++ +++F +++ N Sbjct: 1 MMRALWTAGSGMTAQQLNVDVIANNLSNVNTTAYKKERLEFKDMLYDTLNRAYILDGEGR 60 Query: 54 ----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKV 108 Q + + G+F T LD A++GD +F + PR I+ TRDG FK+ Sbjct: 61 PVNLQVGYGTVPMATLKNFQSGNFEKTDNPLDLAIDGDGFFMVLGPRGDIVYTRDGSFKI 120 Query: 109 T--DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG------KVIATMGL 160 + ++G++++ S YPVLD + V I + NV GE+S + +GL Sbjct: 121 SVTENGNMLTTSDGYPVLDESGVEIILDIDISKLNVSSDGELSYTDENGVVVPLGQRIGL 180 Query: 161 YSVDMSQGFVRRENSGISPNIPP----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 G ++ + E +++ +LE SN + EM ++I Sbjct: 181 VKFPNRNGLESIGSNFYASTSASGEAVPDEELGKKSNIRQYYLESSNVQVVEEMVKLIVA 240 Query: 217 TQKFNSITTLIDENEKSMLEAIRNI 241 + + + I ++ + N+ Sbjct: 241 QRAYEINSKAIQSADEMLG-IANNL 264 >gi|109946869|ref|YP_664097.1| flagellar basal body rod protein FlgG [Helicobacter acinonychis str. Sheeba] gi|109714090|emb|CAJ99098.1| flagellar basal-body rod protein FlgG [Helicobacter acinonychis str. Sheeba] Length = 262 Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 91/261 (34%), Gaps = 21/261 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S + LA + + T ++N++N +T GF+ + F+++ Sbjct: 1 MLRSLYSATSGMLAQQTHIDTTSNNIANVNTTGFKKSRADFNDLFYQAMQYAGTNTSNTT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 V GS T LD A+ G +F ++ P TR G F Sbjct: 61 LSPDGMEVGLGVRPSAITKMFSQGSPKETENNLDVAIVGKGFFQVQLPDGTTAYTRSGNF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQKGKVIATMGLYSVDM 165 K+ + G+LV++ G + + + + VI + L + Sbjct: 121 KLDEQGNLVTSEGYLLIPQITLPEDTTQVNIGVDGTVSVTQGLQTTSNVIGQITLANFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ S + +++GFLE SN + EM +I + + Sbjct: 181 PAGLHSMGDNLFSITNASGDAIVGNPDSQGLGKLRQGFLELSNVRLVEEMTDLITAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + + I + + + + ++ Sbjct: 241 EANSKSIQTADAML-QTVNSL 260 >gi|15646192|ref|NP_208376.1| flagellar basal body rod protein FlgG [Helicobacter pylori 26695] gi|188528376|ref|YP_001911063.1| flagellar basal body rod protein FlgG [Helicobacter pylori Shi470] gi|217033804|ref|ZP_03439229.1| hypothetical protein HP9810_877g8 [Helicobacter pylori 98-10] gi|308183740|ref|YP_003927867.1| flagellar basal body rod protein FlgG [Helicobacter pylori PeCan4] gi|2314768|gb|AAD08623.1| flagellar basal-body rod protein (flgG) [Helicobacter pylori 26695] gi|188144616|gb|ACD49033.1| flagellar basal body rod protein FlgG [Helicobacter pylori Shi470] gi|216943702|gb|EEC23145.1| hypothetical protein HP9810_877g8 [Helicobacter pylori 98-10] gi|261838871|gb|ACX98637.1| flagellar basal-body rod protein [Helicobacter pylori 51] gi|297380761|gb|ADI35648.1| flagellar basal-body rod protein FlgG [Helicobacter pylori v225d] gi|308062867|gb|ADO04755.1| flagellar basal body rod protein FlgG [Helicobacter pylori Cuz20] gi|308064367|gb|ADO06254.1| flagellar basal body rod protein FlgG [Helicobacter pylori Sat464] gi|308065925|gb|ADO07817.1| flagellar basal body rod protein FlgG [Helicobacter pylori PeCan4] gi|315585990|gb|ADU40371.1| flagellar basal-body rod protein FlgG [Helicobacter pylori 35A] gi|317178306|dbj|BAJ56095.1| flagellar basal body rod protein FlgG [Helicobacter pylori F16] gi|317179787|dbj|BAJ57575.1| flagellar basal body rod protein FlgG [Helicobacter pylori F30] gi|317181286|dbj|BAJ59072.1| flagellar basal body rod protein FlgG [Helicobacter pylori F32] gi|317182809|dbj|BAJ60593.1| flagellar basal body rod protein FlgG [Helicobacter pylori F57] gi|332674396|gb|AEE71213.1| flagellar basal-body rod protein FlgG [Helicobacter pylori 83] Length = 262 Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 91/261 (34%), Gaps = 21/261 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S + LA + + T ++N++N +T GF+ + F+++ Sbjct: 1 MLRSLYSATSGMLAQQTHIDTTSNNIANVNTTGFKKSRADFNDLFYQAMQYAGTNTSNTT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 V GS T LD A+ G +F ++ P TR G F Sbjct: 61 LSPDGMEVGLGVRPSAITKMFSQGSPKETENNLDVAITGKGFFQVQLPDGTTAYTRSGNF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQKGKVIATMGLYSVDM 165 K+ + G+LV++ G + + + + VI + L + Sbjct: 121 KLDEQGNLVTSEGYLLIPQITLPEDTTQVNIGVDGTVSVTQGLQTTSNVIGQITLANFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ S + +++GFLE SN + EM +I + + Sbjct: 181 PAGLHSMGDNLFSITNASGEAIVGNPDSQGLGKLRQGFLELSNVRLVEEMTDLITAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + + I + + + + ++ Sbjct: 241 EANSKSIQTADAML-QTVNSL 260 >gi|86356306|ref|YP_468198.1| flagellar basal body rod protein FlgF [Rhizobium etli CFN 42] gi|86280408|gb|ABC89471.1| flagellar basal-body rod protein [Rhizobium etli CFN 42] Length = 244 Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 106/242 (43%), Positives = 163/242 (67%), Gaps = 1/242 (0%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 MQ+ + L++Q+ALE+RL+T+ADNM+N +T GFR +VKF E+V A KN ++ K++FV+ Sbjct: 1 MQSGLYVSLSSQMALEKRLNTIADNMANVNTTGFRATEVKFDEMVAATKNKLNTKVAFVS 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 G +YL+++ G TG LDFA++GDAWFAL++P G +LTRDGRF + + G LVS G Sbjct: 61 QGNDYLNEQNGELQHTGNMLDFAIKGDAWFALDTPAGRVLTRDGRFTIRETGELVSIRGY 120 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 PVLD PIQ+ K VG G I Q + + ++GL+ D+S+G++R ENSGI Sbjct: 121 -PVLDAGGAPIQLDTKAGEPAVGSDGIIYQGDRQVGSLGLFEADISKGYLRYENSGIMTT 179 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 P + D V V++G+LE+SN N+M E+ Q+I + + F SI++L+ ++E S +A++ Sbjct: 180 DQPRAVVDRFNVGVEQGYLENSNVNAMREITQLIEVNRAFESISSLMRDSEDSFKQAVQT 239 Query: 241 IA 242 + Sbjct: 240 LG 241 >gi|203288201|ref|YP_002223216.1| flagellar basal-body rod protein [Borrelia recurrentis A1] gi|201085421|gb|ACH94995.1| flagellar basal-body rod protein [Borrelia recurrentis A1] Length = 265 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 50/263 (19%), Positives = 93/263 (35%), Gaps = 23/263 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + + A + + T+A+N+SN +T+GF+ I+ +F +++ + Sbjct: 1 MMRALWTSASGMKAQQYNVDTIANNLSNVNTIGFKKIRAEFEDLIYQTQRRAGTPATEDT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 + E G+ T D A+EGD ++ + G TRDG F Sbjct: 61 VTPLGNQVGHGTKVSATHRLFEQGNLQVTNLNTDVAIEGDGFYKVLLSDGTYGYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG---KVIATMGLYSV 163 K+ +G LV+ G + +++ I I G +G + + + Sbjct: 121 KIDANGHLVTNQGYILLPEISFPEEYIKNSIAISQEGIISVKVNEGLEPIELGQIEIARF 180 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 G N+ I +K+G LE SN EM MI + Sbjct: 181 VNPAGLNAIGNNIFKETIGSGEEISGIPGSNGMGKLKQGMLEMSNVAIAEEMVTMIVAQR 240 Query: 219 KFNSITTLIDENEKSMLEAIRNI 241 + + I ++ + N+ Sbjct: 241 AYEINSKAIHTSDNMLG-IANNL 262 >gi|304317904|ref|YP_003853049.1| flagellar basal-body rod protein FlgF [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302779406|gb|ADL69965.1| flagellar basal-body rod protein FlgF [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 248 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 51/253 (20%), Positives = 102/253 (40%), Gaps = 18/253 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKND------ 51 M + +A ++ + +++N++N +T G++ V F + + Sbjct: 1 MLRGLYTASSGMIAQQKIVDVLSNNIANVNTSGYKKDTVTTMAFPDFMVTRSGGDNVPYN 60 Query: 52 --IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109 I V + G+ T +LDFA++G +F + +P GI TRDG F + Sbjct: 61 GYIGNMDYGVLVETFNTNFSEGNIEKTDGKLDFAIDGSGFFTVSTPNGIRYTRDGSFTLN 120 Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169 +G LV+ G Y + I + +V + G IS G+ + + + Sbjct: 121 SNGYLVTKDGYYVM----GQNGPIQLNNGDISVDDFGNISLNGQTVNKLNIVDFSNYSTL 176 Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 + N+ + VK+G+LE SN N + EM MI + + + + Sbjct: 177 RKEGNNLFFTTGG---QAIPASGAVKQGYLEGSNVNPVDEMVTMISAMRTYEANQKTVSA 233 Query: 230 NEKSMLEAIRNIA 242 ++++ +A+ + Sbjct: 234 FDETLDKAVNEVG 246 >gi|15612557|ref|NP_224210.1| flagellar basal body rod protein FlgG [Helicobacter pylori J99] gi|4156115|gb|AAD07066.1| FLAGELLAR BASAL-BODY ROD PROTEIN (DISTAL ROD PROTEIN) [Helicobacter pylori J99] gi|317015022|gb|ADU82458.1| flagellar basal body rod protein FlgG [Helicobacter pylori Gambia94/24] Length = 262 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 91/261 (34%), Gaps = 21/261 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S + LA + + T ++N++N +T GF+ + F+++ Sbjct: 1 MLRSLYSATSGMLAQQTHIDTTSNNIANVNTTGFKKSRADFNDLFYQAMQYAGTNTSNTT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 V GS T LD A+ G +F ++ P TR G F Sbjct: 61 LSPDGMEVGLGVRPSAITKMFSQGSPKETENNLDIAITGKGFFQVQLPDGTTAYTRSGNF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQKGKVIATMGLYSVDM 165 K+ + G+LV++ G + + + + VI + L + Sbjct: 121 KLDEQGNLVTSEGYLLIPQITLPEDTTQVNIGVDGTVSVTQGLQTTSNVIGQITLANFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ S + +++GFLE SN + EM +I + + Sbjct: 181 PAGLHSMGDNLFSITNASGDAIVGNPDSQGLGKLRQGFLELSNVRLVEEMTDLITAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + + I + + + + ++ Sbjct: 241 EANSKSIQTADAML-QTVNSL 260 >gi|114706771|ref|ZP_01439671.1| flagellar basal-body rod protein [Fulvimarina pelagi HTCC2506] gi|114537719|gb|EAU40843.1| flagellar basal-body rod protein [Fulvimarina pelagi HTCC2506] Length = 260 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 47/252 (18%), Positives = 96/252 (38%), Gaps = 21/252 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----------- 50 + I A E + +A+N++N +T GF+ + +F++++ ++ Sbjct: 1 MRALAIAATGMNAQETNVEVIANNIANVNTTGFKRARAEFTDLLYQVERAKGVAAAGAEG 60 Query: 51 ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP-RGIILTRDGRF 106 + Q V G+ TG +LD AL G+ WF ++ P I TRDG F Sbjct: 61 VVPEGAQLGLGVRLAAIRNVHLQGALKETGNKLDLALNGEGWFQIQGPGGAIRYTRDGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 +G +V+ G +VP + + + + + + L + + Sbjct: 121 NTNAEGQIVTLDGYLVD-PELTVPANTSEIVVNEAGQVYARVEGELQDVGQLTLATFANN 179 Query: 167 QGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221 G + S + V +G+LEDSN + + E+ ++I + + Sbjct: 180 AGLHAEGGNLFSETVASGAPVVGVPGDPGYGVVHQGYLEDSNVDPVKEISELISAQRAYE 239 Query: 222 SITTLIDENEKS 233 + +I ++ Sbjct: 240 MNSKIISAADEM 251 >gi|224437199|ref|ZP_03658180.1| flagellar basal body rod protein FlgG [Helicobacter cinaedi CCUG 18818] gi|313143665|ref|ZP_07805858.1| flagellar basal body rod protein FlgG [Helicobacter cinaedi CCUG 18818] gi|313128696|gb|EFR46313.1| flagellar basal body rod protein FlgG [Helicobacter cinaedi CCUG 18818] Length = 262 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 47/257 (18%), Positives = 96/257 (37%), Gaps = 22/257 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S L + ++ ++N++N +T G++ + +F+++ + Sbjct: 1 MMRSLYTATTGMLGQQMQIDNTSNNIANVNTTGYKKQRAEFADLFYQVLQYAGTSTSETT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 V G T LD A+ G+ +F +E P I TR G F Sbjct: 61 ISPTGIEVGIGVRPVAVQKMFSQGHPKETENNLDVAITGNGFFQIELPDGNIAYTRAGSF 120 Query: 107 KVTDDGSLVSASGKY--PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 K+ ++G++V+A G P L + QI + +G ++ V+ + + + Sbjct: 121 KLDNNGNVVNAEGYRLIPELTIPEGATQINIGTDGTVSVIEGNQTEVN-VLGQIEIVNFI 179 Query: 165 MSQGFVRRENSGIS-PNIPPTPLED----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G ++ N P+ +++GFLE SN + EM +I + Sbjct: 180 NPAGLHSLGDNLFINTNASGDPVAGVPGLDGFGQLRQGFLELSNVKLVEEMTDLITGQRA 239 Query: 220 FNSITTLIDENEKSMLE 236 + + + I + + Sbjct: 240 YEANSKSIQTADSMLQT 256 >gi|108563958|ref|YP_628274.1| flagellar basal body rod protein FlgG [Helicobacter pylori HPAG1] gi|207092034|ref|ZP_03239821.1| flagellar basal body rod protein FlgG [Helicobacter pylori HPKX_438_AG0C1] gi|208435465|ref|YP_002267131.1| flagellar basal-body rod protein [Helicobacter pylori G27] gi|210135763|ref|YP_002302202.1| flagellar basal body rod protein FlgG [Helicobacter pylori P12] gi|217031740|ref|ZP_03437244.1| hypothetical protein HPB128_155g53 [Helicobacter pylori B128] gi|254780116|ref|YP_003058223.1| flagellar basal body rod protein FlgG [Helicobacter pylori B38] gi|298737122|ref|YP_003729652.1| flagellar basal-body rod protein FlgG [Helicobacter pylori B8] gi|107837731|gb|ABF85600.1| flagellar basal-body rod protein [Helicobacter pylori HPAG1] gi|208433394|gb|ACI28265.1| flagellar basal-body rod protein [Helicobacter pylori G27] gi|210133731|gb|ACJ08722.1| flagellar basal-body rod protein [Helicobacter pylori P12] gi|216946587|gb|EEC25187.1| hypothetical protein HPB128_155g53 [Helicobacter pylori B128] gi|254002029|emb|CAX30288.1| Flagellar basal-body rod protein flgG (Distal rod protein) [Helicobacter pylori B38] gi|298356316|emb|CBI67188.1| flagellar basal-body rod protein FlgG [Helicobacter pylori B8] gi|307638271|gb|ADN80721.1| Flagellar basal-body rod protein [Helicobacter pylori 908] gi|317010275|gb|ADU80855.1| flagellar basal body rod protein FlgG [Helicobacter pylori India7] gi|317011821|gb|ADU85568.1| flagellar basal body rod protein FlgG [Helicobacter pylori SouthAfrica7] gi|325996863|gb|ADZ52268.1| Flagellar basal-body rod protein [Helicobacter pylori 2018] gi|325998456|gb|ADZ50664.1| Flagellar basal-body rod protein [Helicobacter pylori 2017] Length = 262 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 91/261 (34%), Gaps = 21/261 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S + LA + + T ++N++N +T GF+ + F+++ Sbjct: 1 MLRSLYSATSGMLAQQTHIDTTSNNIANVNTTGFKKSRADFNDLFYQAMQYAGTNTSNTT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 V GS T LD A+ G +F ++ P TR G F Sbjct: 61 LSPDGMEVGLGVRPSAITKMFSQGSPKETENNLDVAITGKGFFQVQLPDGTTAYTRSGNF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQKGKVIATMGLYSVDM 165 K+ + G+LV++ G + + + + VI + L + Sbjct: 121 KLDEQGNLVTSEGYLLIPQITLPEDTTQVNIGVDGTVSVTQGLQTTSNVIGQITLANFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ S + +++GFLE SN + EM +I + + Sbjct: 181 PAGLHSMGDNLFSITNASGDAIVGNPDSQGLGKLRQGFLELSNVRLVEEMTDLITAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + + I + + + + ++ Sbjct: 241 EANSKSIQTADAML-QTVNSL 260 >gi|238782794|ref|ZP_04626823.1| Flagellar basal-body rod protein flgG [Yersinia bercovieri ATCC 43970] gi|238716217|gb|EEQ08200.1| Flagellar basal-body rod protein flgG [Yersinia bercovieri ATCC 43970] Length = 260 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 41/259 (15%), Positives = 89/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + + +++N++N T GF+ + F +++ Sbjct: 1 MIRSLWIAKTGLEAQQTNMDVISNNLANVSTNGFKRQRAVFEDLLYQTLRQPGAQSTEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRF 106 Q + V GS T D A++G+ +F ++ + TRDG F Sbjct: 61 TIPSGLQLGTGVRPVSTERLHSQGSLNQTSNSKDLAIQGNGFFQIQLADGTTAFTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLD-MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 ++ +G LV++SG + V + + + + L + Sbjct: 121 QIDQNGQLVTSSGYPVQPAITLPPDAETLTVGNDGIVSVTVQGQTAPQQVGQITLSTFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + T+++G++E SN N E+ MI + + Sbjct: 181 DSGLESIGENLYRETQSSGAPNETTPGLNGSGTLRQGYVETSNVNVAEELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + Sbjct: 241 EINSKAVSTSDQMLQRLTQ 259 >gi|303239789|ref|ZP_07326313.1| fagellar hook-basal body protein [Acetivibrio cellulolyticus CD2] gi|302592726|gb|EFL62450.1| fagellar hook-basal body protein [Acetivibrio cellulolyticus CD2] Length = 265 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 55/258 (21%), Positives = 106/258 (41%), Gaps = 23/258 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + + +++N+SN +T ++ +V+F +++ N Sbjct: 1 MMRALWTAGSGMTAQQLSVDVISNNLSNVNTTAYKKERVEFKDMLYETLNRASVMDGDGK 60 Query: 54 ----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV- 108 Q + S +G+ T LDFA++GD +F + P+G TRDG FK+ Sbjct: 61 PVNLQVGHGSSIVATSKSFGIGNLEKTDNPLDFAIDGDGFFTVSGPKGTAYTRDGNFKIS 120 Query: 109 -TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG------KVIATMGLY 161 ++DG+ ++ S YPVLD I I V + GE+S + +G+ Sbjct: 121 VSEDGNKLTTSDGYPVLDDTGAEINIDVDVSKLIVSDFGELSYTDDTGVVVPLGQKIGIV 180 Query: 162 SVDMSQGFVRRENSGISPNIPP----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217 QG ++ + N E + VK+ ++E SN + EM ++I Sbjct: 181 KFSNRQGLESMGSNLYASNSASGEAVQDAEMGTVSNVKQYYIESSNVQVVEEMVKLIVAQ 240 Query: 218 QKFNSITTLIDENEKSML 235 + + + + + + Sbjct: 241 RAYEINSKAVQTADDMLG 258 >gi|187918628|ref|YP_001884193.1| flagellar basal-body rod protein FlgF [Borrelia hermsii DAH] gi|119861476|gb|AAX17271.1| flagellar basal-body rod protein FlgF [Borrelia hermsii DAH] Length = 282 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 50/280 (17%), Positives = 104/280 (37%), Gaps = 38/280 (13%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKND------ 51 M + +A RL +++N++N D G++ F E++ ND Sbjct: 1 MVRGIYTAASGMMAQRHRLDVISNNLANIDLAGYKKDLSVHKAFPEMLIRRLNDDGLYKL 60 Query: 52 ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101 + + + V + Y S E G TG LD AL + +F +++P G T Sbjct: 61 PKGYLETAPVVGKLGTGVEENEIYTSFEQGPLKITGNPLDLALTDEGFFVVQTPEGERYT 120 Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV------- 154 R+G F + +G LV+ G + + + ++ + + Sbjct: 121 RNGSFTLGPEGMLVTKDGYPVIGEKGHIYLKDNNFKITDQGQIFHNTTFEENPKRLVSEY 180 Query: 155 ---------IATMGLYSVDMSQGFVRRENSGISPNI---PPTPLEDLSGVTVKRGFLEDS 202 + + + + + ++ ++ +S + +E S ++ G LE S Sbjct: 181 ENSWENYELLDNLKIVNFEKTRFLKKQGSSLWNRTEISGQAKNIEINSRPKIETGALEGS 240 Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 N N++ EM MI + + + + I + + + I I Sbjct: 241 NVNAINEMVSMITVNRAYEANQKTIQTEDSLLGKLINEIG 280 >gi|13472570|ref|NP_104137.1| flagellar basal body rod protein FlgF [Mesorhizobium loti MAFF303099] gi|17366619|sp|Q98HE3|FLGF_RHILO RecName: Full=Flagellar basal-body rod protein flgF gi|14023316|dbj|BAB49923.1| flagellar basal-body rod protein; FlgF [Mesorhizobium loti MAFF303099] Length = 241 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 101/243 (41%), Positives = 152/243 (62%), Gaps = 4/243 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 MQ S + L+AQ+ALE+RL T+ADN++N +TVGFR VKF ++V + +SF + Sbjct: 1 MQDSLYVALSAQMALERRLDTIADNVANANTVGFRATGVKFEDMVS---GTGQKSVSFAS 57 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 SGK YLS GS TG DFA++GDAWFA+++P G ++TRDGRF + ++G L+S G Sbjct: 58 SGKTYLSGAHGSLSETGNPFDFAIQGDAWFAIDTPAGTVMTRDGRFSMNENGELMSIEG- 116 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 +PVLD PIQ+ ++ G G + Q +++ ++GLY+ D + FVR NSGI P Sbjct: 117 HPVLDAGGAPIQLDPRNGPPKAGADGSLRQNDQLVGSIGLYNFDPGENFVRYGNSGIVPA 176 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 P P+ D S V + +GF+E+SN N + EM ++I + + F + L+ + S EAI+ Sbjct: 177 RTPEPVTDRSDVGIAQGFVEESNVNPVLEMTRLIMVQRAFENTAALMRQTASSSDEAIKT 236 Query: 241 IAS 243 + S Sbjct: 237 LGS 239 >gi|149927800|ref|ZP_01916051.1| flagellar basal body rod protein FlgG [Limnobacter sp. MED105] gi|149823422|gb|EDM82653.1| flagellar basal body rod protein FlgG [Limnobacter sp. MED105] Length = 260 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 48/259 (18%), Positives = 96/259 (37%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + +L +++N++NT T GF+ + F +++ Sbjct: 1 MMRSLWIAKTGLDAQQTQLDVISNNLANTATNGFKRSRAVFEDLLYQTLRQPGAQTTEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 Q + V + G+ TG LD A+ G +F ++ P G TRDG Sbjct: 61 QVPSGLQIGTGVKPVSTVRNFAQGNLQQTGNTLDVAINGQGFFQVQMPDGTTSYTRDGSI 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 ++ +G+LV+++G + + + V + + + + + L S Sbjct: 121 QIDANGTLVTSNGYPVLGPVTIPQGVQEISISQDGVVSAVVQGQVQPQELGQIQLASFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + S T V +GF+E SN N + E+ +I + + Sbjct: 181 PAGLFSMGQNLYSETAASGAPTQAVAGTNGVGFVSQGFVETSNVNVVEELVGLIQAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + I +++ + + Sbjct: 241 EINSKAISTSDQMLQRLSQ 259 >gi|190890357|ref|YP_001976899.1| flagellar basal-body rod protein [Rhizobium etli CIAT 652] gi|190695636|gb|ACE89721.1| flagellar basal-body rod protein [Rhizobium etli CIAT 652] Length = 244 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 106/242 (43%), Positives = 164/242 (67%), Gaps = 1/242 (0%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 MQ+ + L++Q+ALE+RL+T+ADNM+N +T GFR +VKF E+V A KN ++ K++FV+ Sbjct: 1 MQSGLYVSLSSQMALEKRLNTIADNMANVNTTGFRATEVKFDEMVAATKNKLNTKVAFVS 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 G +YL+++ G TG LDFA++GDAWF+L++P G +LTRDGRF + + G LVS G Sbjct: 61 QGNDYLNEQNGELQHTGNMLDFAVKGDAWFSLDTPAGRVLTRDGRFTLKETGELVSIRGY 120 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 P+LD PIQ+ K VG G I Q G+ + ++GL+ D+S+G++R ENSGI Sbjct: 121 -PILDAGGAPIQLDTKAGEPAVGTDGIIYQAGRQVGSLGLFEADISKGYLRYENSGIMTT 179 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 P + D V V++G+LE+SN N+M E+ Q+I + + F SI++L+ ++E S EA++ Sbjct: 180 DQPRAVVDRFNVGVEQGYLENSNVNAMREITQLIEVNRSFESISSLMRDSEDSFKEAVQT 239 Query: 241 IA 242 + Sbjct: 240 LG 241 >gi|116250476|ref|YP_766314.1| flagellar basal body rod protein FlgF [Rhizobium leguminosarum bv. viciae 3841] gi|115255124|emb|CAK06198.1| putative flagella associated protein [Rhizobium leguminosarum bv. viciae 3841] Length = 244 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 107/242 (44%), Positives = 162/242 (66%), Gaps = 1/242 (0%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 MQ+ + L++Q+ALE+RL+T+ADNM+N +T GFR +VKF E+V A +N ++ K++FV+ Sbjct: 1 MQSGLYVSLSSQMALEKRLTTIADNMANVNTTGFRATEVKFDEMVAATRNKLNTKVAFVS 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 G +YL++ G TG LDFA++GDAWFAL++P G +LTRDGRF + D G LVS G Sbjct: 61 QGNDYLNEGNGELQHTGNMLDFAIKGDAWFALDTPAGQVLTRDGRFTIKDTGELVSIRGY 120 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 PVLD PIQ+ VG G I Q G+ I ++GL+ D+S+G++R ENSGI Sbjct: 121 -PVLDAGGAPIQLNTTGGEPAVGTDGIIYQGGRQIGSLGLFEADVSKGYLRYENSGIMTT 179 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 P + D V V++G+LE+SN N+M E+ Q+I + + F S+++L+ ++E S EA++ Sbjct: 180 EQPRAVVDRFNVGVEQGYLENSNVNAMREITQLIEVNRAFESVSSLMRDSEDSFKEAVQT 239 Query: 241 IA 242 + Sbjct: 240 LG 241 >gi|241203100|ref|YP_002974196.1| flagellar basal body rod protein FlgF [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240856990|gb|ACS54657.1| flagellar basal-body rod protein FlgF [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 244 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 108/242 (44%), Positives = 163/242 (67%), Gaps = 1/242 (0%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 MQ+ + L++Q+ALE+RL+T+ADNM+N +T GFR +VKF E+V A KN ++ K++FV+ Sbjct: 1 MQSGLYVSLSSQMALEKRLNTIADNMANVNTTGFRATEVKFDEMVAATKNKLNTKVAFVS 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 G +YL++ G TG LDFA++GDAWFAL++P G +LTRDGRF + D G LVS G Sbjct: 61 QGNDYLNEGNGELQHTGNMLDFAIKGDAWFALDTPAGRVLTRDGRFTIKDTGELVSIRGY 120 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 PVLD PIQ+ K VG G I Q + +A++GL+ D+S+G++R ENSGI Sbjct: 121 -PVLDAGGAPIQLNTKGGEPAVGTDGIIYQADRQVASLGLFEADISKGYLRYENSGIMTT 179 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 P + D V V++G+LE+SN N+M E+ Q+I + + F S+++L+ ++E S EA++ Sbjct: 180 DQPRAVVDRFNVGVEQGYLENSNVNAMREITQLIEVNRAFESVSSLMRDSEDSFKEAVQT 239 Query: 241 IA 242 + Sbjct: 240 LG 241 >gi|327193031|gb|EGE59943.1| flagellar basal-body rod protein [Rhizobium etli CNPAF512] Length = 244 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 107/242 (44%), Positives = 164/242 (67%), Gaps = 1/242 (0%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 MQ+ + L++Q+ALE+RL+T+ADNM+N +T GFR +VKF E+V A KN ++ K++FV+ Sbjct: 1 MQSGLYVSLSSQMALEKRLNTIADNMANVNTTGFRATEVKFDEMVAATKNKLNTKVAFVS 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 G +YL+++ G TG LDFA++GDAWF+L++P G +LTRDGRF + + G LVS G Sbjct: 61 QGNDYLNEQNGELQHTGNMLDFAVKGDAWFSLDTPAGRVLTRDGRFTLKETGELVSIRGY 120 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 PVLD PIQ+ K VG G I Q G+ + ++GL+ D+S+G++R ENSGI Sbjct: 121 -PVLDAGGAPIQLDTKAGEPAVGTDGIIYQAGRQVGSLGLFEADISKGYLRYENSGIMTT 179 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 P + D V V++G+LE+SN N+M E+ Q+I + + F SI++L+ ++E S EA++ Sbjct: 180 DQPRAVVDRFNVGVEQGYLENSNVNAMREITQLIEVNRSFESISSLMRDSEDSFKEAVQT 239 Query: 241 IA 242 + Sbjct: 240 LG 241 >gi|319781687|ref|YP_004141163.1| flagellar basal-body rod protein FlgF [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167575|gb|ADV11113.1| flagellar basal-body rod protein FlgF [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 240 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 98/243 (40%), Positives = 150/243 (61%), Gaps = 4/243 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M+ S + L++Q+ALE+RL T+ADN++N T+GFR VKF +VV + +SF + Sbjct: 1 MRDSLYVALSSQIALERRLDTIADNVANASTIGFRATGVKFEDVVS---GTGQKSVSFAS 57 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 GK YLS G+ TG DFA++GDAWFA+E+P G ++TRDGRF + ++G L+S G Sbjct: 58 PGKTYLSGAHGALSETGNPFDFAIQGDAWFAIETPVGTVMTRDGRFSMNENGELMSIEG- 116 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 +PVLD PIQ+ ++ G G + Q +++ ++GLY+ D FVR NSGI P Sbjct: 117 HPVLDAGGSPIQLDPRNGPPKAGADGSLRQNDQLVGSIGLYNFDPGANFVRYGNSGIVPA 176 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 P P+ D S + V +GFLE+SN N + E+ ++I + + F + L+ + + S EAI+ Sbjct: 177 RTPEPVTDRSDIGVAQGFLEESNVNPVLEITRLIMVQRAFENTAALMRQTDSSTDEAIKT 236 Query: 241 IAS 243 + S Sbjct: 237 LGS 239 >gi|153011524|ref|YP_001372738.1| flagellar basal body rod protein FlgG [Ochrobactrum anthropi ATCC 49188] gi|151563412|gb|ABS16909.1| flagellar basal-body rod protein FlgG [Ochrobactrum anthropi ATCC 49188] Length = 262 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 47/262 (17%), Positives = 89/262 (33%), Gaps = 21/262 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55 + I A + L +A+N++N +T GF+ + +FS+++ + Sbjct: 1 MKALTIAATGMNAQQLNLEVIANNIANINTTGFKRARAEFSDLLYQSERTAGVPNQANQS 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 V + GSF TG D AL G WF ++SP + R G F Sbjct: 61 IVPEGALVGLGVQTAAVRNLHMQGSFNQTGNPFDLALTGKGWFQIQSPTGETLYARAGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE-KGEISQKGKVIATMGLYSVDM 165 DG LV+ G + P + K + + + L + Sbjct: 121 NKNADGQLVTLDGNPVEPAITIPPDAVEVTVTDTGQVFAKLQDQVNQVDLGQLTLANFTN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + ++K+G+LE SN + + E+ +I + + Sbjct: 181 EAGLEPLGGNLYRETEASGGPLVGVPGDPGYGSIKQGYLEASNVDPVKEITDLITAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNIA 242 + +I ++ +N+ Sbjct: 241 EMNSKVIQAADEMAATVSKNLR 262 >gi|330826757|ref|YP_004390060.1| flagellar basal-body rod protein FlgG [Alicycliphilus denitrificans K601] gi|329312129|gb|AEB86544.1| flagellar basal-body rod protein FlgG [Alicycliphilus denitrificans K601] Length = 260 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 48/259 (18%), Positives = 97/259 (37%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S I A + +L ++ N++N T GF+ F +++ + + Sbjct: 1 MINSLWIAKTGMSAQQTQLDVISHNLANVSTTGFKRNSAVFEDLIYQNLRQVGAQTTEEN 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 V + + GS + LD A+ G+ +F ++ P G I TRDG F Sbjct: 61 QLPTGLHLGLGVRTVATSRNFTQGSLQQSSNSLDVAINGNGFFEVQLPDGTIGYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 ++ G +V++ G + E V + + + + + + S Sbjct: 121 QLDAQGRMVTSGGLPVANGITVPQGATSISISETGVVSATIAGNAQPQQLGQLAMSSFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 + G + + P + T +K+GFLE SN N + E+ MI + + Sbjct: 181 AAGLQPVGQNMYKESAASGPPQQGQPGTNGLGVIKQGFLETSNVNVVEELVTMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + I +++ + + + Sbjct: 241 EMNSKAIQTSDQMLAKLSQ 259 >gi|311694363|gb|ADP97236.1| flagellar basal-body rod protein FlgG [marine bacterium HP15] Length = 262 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 47/262 (17%), Positives = 96/262 (36%), Gaps = 20/262 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + +ST+++N++N +T GF+ + F +++ I Sbjct: 1 MHPALWVSKTGLSAQDTNMSTISNNLANVNTTGFKRDRAVFQDLLYQINRQPGGLTTQNS 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+ T LD A+ G + ++ P I TRDG+F Sbjct: 61 ELPSGLQLGTGVRVVGTAKQFSQGNLQITEQPLDMAINGRGFLQVQLPDGQIAYTRDGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 ++ DG +V+ G + + V + + + L Sbjct: 121 QLNADGDVVNPDGYPLEPAINVPENATNITIGKDGTVTAVTDDQAAPVNLGQITLVDFIN 180 Query: 166 SQGFVRRENSGI-SPNIPPTPLED----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 QG N+ + N P E ++++G +E SN + E+ MI + + Sbjct: 181 PQGLQAIGNNLFKATNASGDPAEGEPGLAGLGSIEQGSVESSNVEVVEELVNMITTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNIA 242 + ++ ++ + +NI Sbjct: 241 EMNSKVVSTTDQMLQFITQNIG 262 >gi|71906393|ref|YP_283980.1| flagellar basal body rod protein FlgG [Dechloromonas aromatica RCB] gi|71846014|gb|AAZ45510.1| Protein of unknown function DUF1078 [Dechloromonas aromatica RCB] Length = 260 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 90/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + +L +++N++N T GF+ + F +++ Sbjct: 1 MIRSLWIARTGLDAQQTQLDVISNNLANVSTNGFKRSRAVFEDLLYQTLRQPGAQSSQQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 Q + V G+ T LD A++G+ +F + P G TRDG F Sbjct: 61 QIPTGLQLGTGVRPVSTAHIFTQGNLQKTDNTLDIAVQGNGFFQILLPDGTTGYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 + + G +V++ G ++ + V S I ++ L + Sbjct: 121 QKDNQGQIVTSDGYPLQPNITIPSNALSVSVGTDGTVSVTQSGSAATTQIGSIQLATFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + V +G++E SN N E+ MI + + Sbjct: 181 PAGLQSAGQNLFLETAASGTPTPNTPGSNGAGIVNQGYVETSNVNVAEELVTMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + ++ ++ + + Sbjct: 241 ELNSKVVSTSDAMLGRLTQ 259 >gi|261840277|gb|ACY00043.1| flagellar basal body rod protein FlgG [Helicobacter pylori 52] Length = 262 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 91/261 (34%), Gaps = 21/261 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S + LA + + T ++N++N +T GF+ + F+++ Sbjct: 1 MLRSLYSATSGMLAQQTHIDTTSNNIANVNTTGFKKSRTDFNDLFYQAMQYAGTNTSNTT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 V GS T LD A+ G +F ++ P TR G F Sbjct: 61 LSPDGMEVGLGVRPSAITKMFSQGSPKETENNLDVAITGKGFFQVQLPDGTTAYTRSGNF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQKGKVIATMGLYSVDM 165 K+ + G+LV++ G + + + + VI + L + Sbjct: 121 KLDEQGNLVTSEGYLLIPQITLPEDTTQVNIGVDGTVSVTQGLQTTSNVIGQITLANFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ S + +++GFLE SN + EM +I + + Sbjct: 181 PAGLHSMGDNLFSITNASGEAIVGNPDSQGLGKLRQGFLELSNVRLVEEMTDLITAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + + I + + + + ++ Sbjct: 241 EANSKSIQTADAML-QTVNSL 260 >gi|315453484|ref|YP_004073754.1| flagellar basal-body rod protein [Helicobacter felis ATCC 49179] gi|315132536|emb|CBY83164.1| flagellar basal-body rod protein [Helicobacter felis ATCC 49179] Length = 262 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 92/261 (35%), Gaps = 21/261 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S L + + T ++N++N +TVGF+ + F+++ Sbjct: 1 MLRSLYSATTGMLGQQTHIDTTSNNIANVNTVGFKKQRADFNDLFYQALQYAGTSTSDTT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 V + GS T LD A+ G +F ++ P TR G F Sbjct: 61 KSPNGIEVGLGVRTSSVTKMFSQGSPKETENNLDIAITGKGFFQIQMPDGSTAYTRAGNF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGE-ISQKGKVIATMGLYSVDM 165 K+ D G++V+ G + + + + + VI + L + Sbjct: 121 KIDDQGNMVTTEGYLLIPQITFPQDTTQISIGVDGTVSVTQGNASTSNVIGQITLANFIN 180 Query: 166 SQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ ++ P +++GFLE SN + EM +I + + Sbjct: 181 PAGLHALGDNLLAVTSASGPAIVGNPNGDGYGQLRQGFLELSNVRLVEEMTDLITAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + + I + + + + ++ Sbjct: 241 EANSKTIQTADNML-QTVNSL 260 >gi|157738176|ref|YP_001490860.1| flagellar distal rod protein FlgG [Arcobacter butzleri RM4018] gi|157700030|gb|ABV68190.1| flagellar distal rod protein FlgG [Arcobacter butzleri RM4018] Length = 262 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 41/261 (15%), Positives = 90/261 (34%), Gaps = 21/261 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M A++ ++ ++N++N +T GF+ + +F +++ N Sbjct: 1 MIRGLYTAATGMNAMQHQIDVTSNNIANVNTTGFKKDRAEFQDLMYESLNYTAGRTTQTT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 V G STG LD A+ G +F + P +R+G F Sbjct: 61 LNPTGIDVGLGVRISNIQKEFTEGDLKSTGNPLDIAIAGKGFFQITLPSGETAYSRNGNF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFN-VGEKGEISQKGKVIATMGLYSVDM 165 K+ ++G++V+ +G ++ V K + + + L Sbjct: 121 KLNEEGTIVNGNGYPLQPEIVVPNNVKDISVGTDGLVTAKDPQTGDTIELGQITLADFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G +S + + + ++K+ LE SN + EM +I + + Sbjct: 181 PAGLTPLGDSLFMQSEASGDVIEGDPTTEQFGSLKQSMLESSNVKLVNEMVDLITAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + + I + + + + Sbjct: 241 EANSKAITTADNMLD-IVNRL 260 >gi|332284021|ref|YP_004415932.1| flagellar basal body rod protein FlgG [Pusillimonas sp. T7-7] gi|330427974|gb|AEC19308.1| flagellar basal body rod protein FlgG [Pusillimonas sp. T7-7] Length = 261 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 43/260 (16%), Positives = 88/260 (33%), Gaps = 21/260 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I + + + +++N++N +T GF+ + F +++ Sbjct: 1 MIRSLWIAKTGLESQQTNMDVISNNLANVNTTGFKRSRANFEDLMYQTIRQPGAQVGAAN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V + G+ TG +D A++G + +E P G TRDG Sbjct: 61 QLPSGLQIGTGVRTVATERIHTQGNLKDTGNSMDIAIQGKGFLQVEMPDGTFAYTRDGSL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPI--QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 +V +G LV+A G + I + + + + + L + Sbjct: 121 QVDQNGQLVTAGGYPIQPPINIPDNALTITIARDGMVSVTQPGATGANVEVGQLQLNTFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + P V + + E SN N E+ MI + Sbjct: 181 NPTGLQSAGENLYVETDASGPANFAQPGLDGAGLVLQQYTETSNVNVAEELVNMITTQRA 240 Query: 220 FNSITTLIDENEKSMLEAIR 239 + + I+ +++ + + Sbjct: 241 YEMNSKAIETSDQMLARLTQ 260 >gi|219685599|ref|ZP_03540415.1| flagellar hook-basal body complex protein [Borrelia garinii Far04] gi|219672877|gb|EED29900.1| flagellar hook-basal body complex protein [Borrelia garinii Far04] Length = 282 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 50/280 (17%), Positives = 102/280 (36%), Gaps = 38/280 (13%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51 M + +A +L V++N++N D VG++ F E++ ND Sbjct: 1 MVRGIYTAASGMMAERHKLDVVSNNLANIDLVGYKKDLSIQKAFPEMLIRRLNDDGLYKF 60 Query: 52 ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101 + + + V + Y E G +T LD AL +F +++ G T Sbjct: 61 PKGHLETAPIVGKLGTGVEENEIYTLFEQGPLKTTSNPLDLALTDQGFFVIQTSYGERYT 120 Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV------- 154 R+G F + +G LV+ SG + + + ++ S + Sbjct: 121 RNGSFTIGKEGILVTKSGFPVLGEKGYIYLKKNNFKITPQGQIFHNSSFESNPKRLVSEH 180 Query: 155 ---------IATMGLYSVDMSQGFVRRENSGIS---PNIPPTPLEDLSGVTVKRGFLEDS 202 + T+ + + + + ++ NS + ++ ++ G LE S Sbjct: 181 ENSWKNYELLDTIRIVNFENPRFLKKQGNSLWVDTKTSGKAQEIDISLRPKIETGALEAS 240 Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 N N++ EM MI + + + + I + + + I I Sbjct: 241 NVNAVKEMVLMIEINRAYEANQKTIQTEDSLLGKLINEIG 280 >gi|34558104|ref|NP_907919.1| flagellar basal body rod protein FlgG [Wolinella succinogenes DSM 1740] gi|34483822|emb|CAE10819.1| FLAGELLAR BASAL-BODY ROD PROTEIN DISTAL ROD PROTEIN [Wolinella succinogenes] Length = 263 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 41/261 (15%), Positives = 100/261 (38%), Gaps = 21/261 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + + + ++ ++N++N +T+G++ + +F+++ + Sbjct: 1 MMRALYTATTGMMGQQLQIDVTSNNIANVNTIGYKKQRAEFADLFYQVMEYAGSSTSETT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 V G+F TG LD A+ G+ +F ++ P TR+G F Sbjct: 61 LSPTGIEVGLGVRPTAITKIFSQGNFKETGNNLDIAITGNGFFQIQLPDGTTAYTRNGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 K D+G++V++ G + ++ + V + I + + + Sbjct: 121 KPDDEGNIVNSDGYRLIPEITIPEDATQINIGVDGTVSVLQGNQTEVNTIGQIEIATFIN 180 Query: 166 SQGFVRRENSGI-SPNIPPTPLED----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ + N P+ D +++GF+E SN + EM +I + + Sbjct: 181 PAGLHSLGDNLYLNTNASGDPIVDTPGLNGFGQLRQGFVELSNVKLVEEMTDLITGQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + + I + + + + ++ Sbjct: 241 EANSKSIQTADSML-QTVNSL 260 >gi|51599025|ref|YP_073213.1| flagellar basal body rod protein FlgG [Borrelia garinii PBi] gi|51573596|gb|AAU07621.1| flagellar basal-body rod protein [Borrelia garinii PBi] Length = 265 Score = 173 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 48/263 (18%), Positives = 92/263 (34%), Gaps = 23/263 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + + A + + T+A+N+SN +T GF+ I+ +F +++ +N Sbjct: 1 MMRALWTAASGMTAQQYNVDTIANNLSNVNTTGFKKIRAEFEDLIYQTQNRAGTPATENT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 E G ST D A+EGD ++ + P G TRDG F Sbjct: 61 LRPLGNQVGHGTKIAATQRIFEQGKMQSTNLLTDVAIEGDGFYKILLPDGSYAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNV---GEKGEISQKGKVIATMGLYSV 163 K+ + LV++ G + ++ I I K + S + + + + Sbjct: 121 KIDSNRELVTSQGYKVLPNIFFPEEYIQNSITISEQGIVSVKIDNSNEPIELGQIEISRF 180 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 G ++ +++ LE SN + EM MI + Sbjct: 181 VNPAGLSAIGSNLFKETAGSGQEIAGIPGSEGMGILRQSILEMSNVSIAEEMVTMIVAQR 240 Query: 219 KFNSITTLIDENEKSMLEAIRNI 241 + + I ++ + N+ Sbjct: 241 AYEINSKAIQTSDNMLG-IANNL 262 >gi|257457573|ref|ZP_05622740.1| flagellar basal-body rod protein FlgG [Treponema vincentii ATCC 35580] gi|257444959|gb|EEV20035.1| flagellar basal-body rod protein FlgG [Treponema vincentii ATCC 35580] Length = 271 Score = 173 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 53/268 (19%), Positives = 98/268 (36%), Gaps = 26/268 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51 M + + A +++L +A N++N DT ++ F E++ ND Sbjct: 1 MIRGWYTAASGMNAQQKQLDVIAQNLANADTTSYKRDVATHKNFPELLIRRLNDDGVVKN 60 Query: 52 ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101 I + V + + E GS T T D ALEG +F +E+P G T Sbjct: 61 PFGSSDVAPIIGKLGLGVELNEIFTEFEQGSLKQTNTASDLALEGKGFFCVETPYGERYT 120 Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMA----SVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157 R+G F V +G L++ G + + ++ E + Sbjct: 121 RNGNFTVGVEGYLMTKEGYPVLGENGRIFLQDQEYKVNQNGEVYARPMTEPDSDSTLADR 180 Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPL---EDLSGVTVKRGFLEDSNANSMYEMGQMI 214 + + + + + + +S P E V +GF+E SN + EM +MI Sbjct: 181 LKIVTFENDRYLKKHGSSFYLDTPVSGPAIAAEGGDRPVVVQGFVEASNIKVVNEMVRMI 240 Query: 215 HLTQKFNSITTLIDENEKSMLEAIRNIA 242 + + + + I + M + +A Sbjct: 241 EVNRAYEANQKTIQSEDTMMSKLWNEVA 268 >gi|258404727|ref|YP_003197469.1| flagellar basal-body rod protein FlgG [Desulfohalobium retbaense DSM 5692] gi|257796954|gb|ACV67891.1| flagellar basal-body rod protein FlgG [Desulfohalobium retbaense DSM 5692] Length = 262 Score = 173 bits (437), Expect = 3e-41, Method: Composition-based stats. Identities = 51/263 (19%), Positives = 97/263 (36%), Gaps = 22/263 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M T+ + A + + +A+N++N +T GF+ +V F +++ ++ Sbjct: 1 MTTALSTAATGMEAQQTIVDVIANNLANVNTTGFKKSRVDFQDLLYQDARNVGSAVTQEN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q V + Y +G TG ELD A+EGD +F + P TR G Sbjct: 61 DVPTGTQIGHGVRTAAVYKINTIGDINRTGNELDLAIEGDGFFQVTLPDGETAYTRAGAL 120 Query: 107 KVTDDGSLVSASGKY--PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 K DG +V++ G P + + + + + + T+ L Sbjct: 121 KKDGDGRVVTSDGYPLEPEIVIPENATDVVIGKDGTVQAYLEGEAATPSDLGTIELARFS 180 Query: 165 MSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G N+ + + + FLEDSN ++M EM MI + Sbjct: 181 NPAGLKNIGNNLHLETQSSGAPIVDLPGEDGLGALAQNFLEDSNVSTMQEMVNMISAQRA 240 Query: 220 FNSITTLIDENEKSMLEAIRNIA 242 + + + ++ + + +A Sbjct: 241 YEINSKAVKTADEML-QMTNQLA 262 >gi|118581848|ref|YP_903098.1| flagellar basal body rod protein [Pelobacter propionicus DSM 2379] gi|118504558|gb|ABL01041.1| flagellar basal body rod protein [Pelobacter propionicus DSM 2379] Length = 245 Score = 173 bits (437), Expect = 3e-41, Method: Composition-based stats. Identities = 61/248 (24%), Positives = 116/248 (46%), Gaps = 11/248 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN-----DIDQK 55 M + L+ +A +R+ T+++N++N +T GF+ K+ F ++ N Sbjct: 1 MNSGMYAALSGSIAAMKRMDTISNNLANVNTPGFKKDKMLFESMLAGTSNPPAVPQSSTA 60 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115 + Y+ VGS TG LDFA++GD +F +++P+G TR G F+++ DG+LV Sbjct: 61 DPIMQKESVYIDYGVGSASQTGNPLDFAIDGDGFFVIQTPQGRAYTRQGNFRLSVDGTLV 120 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM-GLYSVDMSQGFVRREN 174 +A G + I + +V +GE++ G TM + + + Sbjct: 121 TADG----FPVLGQDDVIRIQGGQVDVNSRGEVTVDGTPTGTMISIVDFPKPYNLTK-VS 175 Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 S P + ++++G LE SN +++ EM QMI T+ F++ +I + + Sbjct: 176 SAQFVPANPQATPQAATGSIRQGQLEGSNVDTITEMVQMIETTRYFDACQRVIKGFDDMV 235 Query: 235 LEAIRNIA 242 +A ++ Sbjct: 236 GKAANDLG 243 >gi|308273544|emb|CBX30146.1| Flagellar basal-body rod protein flgG [uncultured Desulfobacterium sp.] Length = 260 Score = 173 bits (437), Expect = 3e-41, Method: Composition-based stats. Identities = 47/257 (18%), Positives = 91/257 (35%), Gaps = 18/257 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + A + + +++N++N +TVGF+ + F +++ + Sbjct: 1 MLRGMWSAASGMDAQKMMIDVISNNLANVNTVGFKKSRPDFQDLMYQTMSQGGSTTTSGD 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107 Q G F T ELD ++EG +F + S + TR G FK Sbjct: 61 QIPGGIQVGMGTMPVSVQKMFMQGDFKETKNELDLSIEGKGFFKVISNDEEVYTRAGNFK 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 + DG++ + +G+ M + + S +G V+ + L+S Sbjct: 121 MDKDGNICTPNGEKLQPAMTIPSDTMTISIDKSGTVTAFGPSGQGTVVGVIELHSFTNPA 180 Query: 168 GFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222 G ++ T+ +GF+E SN + + EM MI + + Sbjct: 181 GLFSMGHNLYRKTDASGDAIAAAPGSDGMGTIAQGFIEMSNVDVVEEMVAMIMAQRAYEV 240 Query: 223 ITTLIDENEKSMLEAIR 239 + I + + A Sbjct: 241 SSKSIQTADNMLQMANN 257 >gi|192361762|ref|YP_001982398.1| flagellar basal body rod protein FlgG [Cellvibrio japonicus Ueda107] gi|190687927|gb|ACE85605.1| flagellar basal-body rod protein FlgG [Cellvibrio japonicus Ueda107] Length = 261 Score = 173 bits (437), Expect = 3e-41, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 97/261 (37%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M ++ + A +++L+T+++N++N TVGF+ + F +++ + Sbjct: 1 MHSALYVSKTGLAAQDRQLATISNNLANVATVGFKRDRAIFEDLLYQNQRQPGAQETQET 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+ T LD A++G + + P I TR+G+ Sbjct: 61 QLPSGLQLGTGVRVVATQKEFTEGNIQVTEQALDVAIDGRGFLQVLLPDGTIAYTRNGQL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 ++ +G +V+A G + V + + + L Sbjct: 121 QLNGEGQVVNADGYLLEPAIIVPEGVNKITIGSNGTVNAFAPGVADPQQLGDITLTDFIN 180 Query: 166 SQGFVRRENSGI-SPNIPPTPLE----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + P++ + ++K+G LE SN + + EM MI + + Sbjct: 181 PSGLQAIGGNLFLETPASGNPVQGIPGENGMGSLKQGMLESSNVDIVEEMVNMITTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + ++ ++ + +N+ Sbjct: 241 EMNSKVVSTADQMLQYITQNL 261 >gi|317013400|gb|ADU84008.1| flagellar basal body rod protein FlgG [Helicobacter pylori Lithuania75] Length = 262 Score = 173 bits (437), Expect = 3e-41, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 91/261 (34%), Gaps = 21/261 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S + LA + + T ++N++N +T GF+ + F+++ Sbjct: 1 MLRSLYSATSGMLAQQTHIDTTSNNIANVNTTGFKKSRADFNDLFYQAMQYAGTNTSNTT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 V GS T LD A+ G +F ++ P TR G F Sbjct: 61 LSPDGMEVGLGVRPSAITKMFSQGSPKETENNLDVAITGKGFFQVQLPDGTTAYTRSGNF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQKGKVIATMGLYSVDM 165 K+ + G+LV++ G + + + + VI + L + Sbjct: 121 KLDEQGNLVTSEGYLLIPQITLPEDTTQVNIGVDGTVSVTQGLQTTSNVIGQITLANFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ S + +++GFLE SN + EM +I + + Sbjct: 181 PAGLHSMGDNLFSITNASGNAIVGNPDSQGLGKLRQGFLELSNVRLVEEMTDLITAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + + I + + + + ++ Sbjct: 241 EANSKSIQTADAML-QTVNSL 260 >gi|264676572|ref|YP_003276478.1| flagellar basal-body rod protein FlgG [Comamonas testosteroni CNB-2] gi|299531284|ref|ZP_07044694.1| flagellar basal-body rod protein FlgG [Comamonas testosteroni S44] gi|262207084|gb|ACY31182.1| flagellar basal-body rod protein FlgG [Comamonas testosteroni CNB-2] gi|298720691|gb|EFI61638.1| flagellar basal-body rod protein FlgG [Comamonas testosteroni S44] Length = 260 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 45/259 (17%), Positives = 91/259 (35%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S I A + +L ++ N++N T G++ F +++ + Sbjct: 1 MINSLFIAKTGMEAQQTQLDVISHNLANVSTTGYKRANAVFEDLIYQNLRQSGSQTTEQN 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 V + + GS + LD A+ G+ +F + P I TRDG F Sbjct: 61 QLPTGLHLGLGVRTVATSRNFLQGSLQQSSNALDVAINGNGFFEVNMPDGTIAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V G LV++SG + V + + + + Sbjct: 121 EVDAQGQLVTSSGLPVANGITIPQGATKVSISHDGVVSVTMPGQAAPQQVGNIAMSQFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 + G R + + + T +++G+LE SN N + E+ MI + + Sbjct: 181 AAGLEPRGQNLYVETASSGQPQQGTPGTNGLGTIQQGYLEASNVNVVQELVTMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + I +++ + + + Sbjct: 241 EMNSKAIQTSDQMLAKLAQ 259 >gi|238764394|ref|ZP_04625344.1| Flagellar basal-body rod protein flgG [Yersinia kristensenii ATCC 33638] gi|238697420|gb|EEP90187.1| Flagellar basal-body rod protein flgG [Yersinia kristensenii ATCC 33638] Length = 260 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 45/259 (17%), Positives = 92/259 (35%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + + +A+N++N T GF+ + F +++ Sbjct: 1 MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V G+ T D A++G+ +F ++ P G TRDG F Sbjct: 61 TLPSGLQIGTGVRPVATERLHSQGNLSKTDNTKDVAIKGEGFFQVQMPDGTNAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V +G LV+ASG + + V + + + + L + Sbjct: 121 QVDQNGQLVTASGFQVQPAITIPANALKMTIGRDGIVSVTLQGQTATQQVGQLTLTTFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 + G + + G + +G++E SN N E+ MI + + Sbjct: 181 NSGLESVGENLYQETASSGAPNETTPGLNGGGLLYQGYVETSNVNVAEELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + + Sbjct: 241 EINSKAVSTSDQMLQKLTQ 259 >gi|219684370|ref|ZP_03539314.1| flagellar hook-basal body complex protein [Borrelia garinii PBr] gi|219672359|gb|EED29412.1| flagellar hook-basal body complex protein [Borrelia garinii PBr] Length = 282 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 50/280 (17%), Positives = 102/280 (36%), Gaps = 38/280 (13%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51 M + +A +L V++N++N D VG++ F E++ ND Sbjct: 1 MVRGIYTAASGMMAERHKLDVVSNNLANIDLVGYKKDLSIQKAFPEMLIRRLNDDGLYKF 60 Query: 52 ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101 + + + V + Y E G +T LD AL +F +++ G T Sbjct: 61 PKGHLETAPIVGKLGTGVEENEIYTLFEQGPLKTTSNPLDLALTDQGFFVIQTSDGERYT 120 Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV------- 154 R+G F + +G LV+ SG + + + ++ S + Sbjct: 121 RNGSFTIGKEGILVTKSGFPVLGEKGYIYLKKNNFKITPQGQIFHNSSFESNPKRLVSEH 180 Query: 155 ---------IATMGLYSVDMSQGFVRRENSGIS---PNIPPTPLEDLSGVTVKRGFLEDS 202 + T+ + + + + ++ NS + ++ ++ G LE S Sbjct: 181 ENSWENYELLDTIRIVNFENPRFLKKQGNSLWVDTKTSGKAQEIDISLRPKIETGALEAS 240 Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 N N++ EM MI + + + + I + + + I I Sbjct: 241 NVNAVKEMVLMIEINRAYEANQKTIQTEDSLLGKLINEIG 280 >gi|269792757|ref|YP_003317661.1| flagellar basal-body rod protein FlgG [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100392|gb|ACZ19379.1| flagellar basal-body rod protein FlgG [Thermanaerovibrio acidaminovorans DSM 6589] Length = 262 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 52/263 (19%), Positives = 92/263 (34%), Gaps = 23/263 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G +A + L V+ N++N +T GF+ ++ F +++ I + Sbjct: 1 MIRSLWSGATGMIAQQTNLDVVSHNLANVNTAGFKKLRADFQDLMYQIDREPGAPVEPAS 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q G+ TG D A+EGD +F + P G TRDG + Sbjct: 61 MVPNGIQVGLGSRVSGTSRIMGQGNMQVTGNPTDVAIEGDGFFQVTMPDGTVAYTRDGAW 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 ++ +G +V+A G + V Q + I + L Sbjct: 121 RIDGNGQIVTADGYLLEPAVTVPNNAKEIIISPTGQVSVLLPGDQNPQEIGQIQLARFVN 180 Query: 166 SQGFVRRENSGISPN------IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + I P E+ G T+ + LE +N + EM MI + Sbjct: 181 PGGLKALGKNLFIETPASGAPIVGNPGEEGLGTTI-QRTLEMANVQVVEEMVNMIVAQRA 239 Query: 220 FNSITTLIDENEKSMLEAIRNIA 242 + + + I ++ + N+ Sbjct: 240 YEANSKTIATADELL-RIANNLR 261 >gi|239907792|ref|YP_002954533.1| flagellar basal-body rod protein FlgG [Desulfovibrio magneticus RS-1] gi|239797658|dbj|BAH76647.1| flagellar basal-body rod protein FlgG [Desulfovibrio magneticus RS-1] Length = 260 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 46/257 (17%), Positives = 100/257 (38%), Gaps = 18/257 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S +A++ ++ T+++N++N +TVGF+ + +F +++ + Sbjct: 1 MMRSLWTASTGMVAMQMQIDTMSNNLANVNTVGFKKSRAEFEDLMYQTLQVAGTETVGGN 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107 V + G +TG +LD A++G+ +F ++ + TR G FK Sbjct: 61 RLPTGLQVGLGVKPTTVHKFFTQGDMQNTGNQLDIAIQGEGFFKVDVNGRELYTRAGSFK 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 + DG++V+A+G + + + + LY+ + Sbjct: 121 LNQDGTIVTANGYPLQPAFSVPTETKTITITENGHLSCLDANSAELAATDIPLYTFINNA 180 Query: 168 GFVRRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222 G + S + + + T+ +GFLE SN + EM +I + + + Sbjct: 181 GLTAEGRNLYSTSQASGAANEVTPGNQNAGTLAQGFLEMSNVELVDEMVGLIVGQRAYEA 240 Query: 223 ITTLIDENEKSMLEAIR 239 + I + + A+ Sbjct: 241 NSKSITTADGMLQTAVN 257 >gi|257457574|ref|ZP_05622741.1| flagellar basal-body rod protein FlgG [Treponema vincentii ATCC 35580] gi|257444960|gb|EEV20036.1| flagellar basal-body rod protein FlgG [Treponema vincentii ATCC 35580] Length = 264 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 48/260 (18%), Positives = 90/260 (34%), Gaps = 22/260 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ------ 54 M S + + + TVA+N++N +T GF+ + +F +++ Sbjct: 1 MVRSLWTAATGMNSQQANIDTVANNLANVNTSGFKKQRAEFEDLLYQTIRAAGTPATEDT 60 Query: 55 -------KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 + E GS TG D A+ G+ +F + G TRDG F Sbjct: 61 ITPVGVEMGHGAKLAATQRNFEQGSLQQTGVSTDVAIAGEGFFRVLQYDGTYAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI---SQKGKVIATMGLYSV 163 K+ D LV+++G + ++ +P I G + + LY Sbjct: 121 KIDADRQLVTSNGLRCLPEIIFPENYLPHTIAISQDGRVSVRVGEQDDPVEVGQIELYRF 180 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 G + ++ + FLE SN +++ EM MI + Sbjct: 181 QNPVGLSAQGSNLFRQTPASGQAIAGRPGFNGFGKTEHKFLEMSNVSTVSEMVNMIVAQR 240 Query: 219 KFNSITTLIDENEKSMLEAI 238 + + I ++ + A+ Sbjct: 241 AYEFNSKAIQTSDNMLGTAV 260 >gi|296126376|ref|YP_003633628.1| fagellar hook-basal body protein [Brachyspira murdochii DSM 12563] gi|296018192|gb|ADG71429.1| fagellar hook-basal body protein [Brachyspira murdochii DSM 12563] Length = 282 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 59/280 (21%), Positives = 103/280 (36%), Gaps = 38/280 (13%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS---EVVGAIKND------ 51 M G + +A + RL VA+N++N D GF+ V F E++ A D Sbjct: 1 MVRGVYTGASGMMAEQARLDVVANNLANVDKPGFKRDTVSFKSFPEMMAARTEDDGVVIF 60 Query: 52 ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101 + + + V + + E GS TG +LD AL +FA+E+P G T Sbjct: 61 PLGSTDVRPYVGRMGTGVEVNEVFTEWEQGSLRETGNQLDIALGDKGFFAVETPHGERYT 120 Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF---------------NVGEKG 146 R+G F + D LV+ G + + + I+ + V Sbjct: 121 RNGSFLIDKDHYLVTKHGYKVMGENGYIQIKTNNFNIDEEGRVSINRRYQDGNTFVQFND 180 Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV----TVKRGFLEDS 202 + +++ T+ + D + + S P V FLE S Sbjct: 181 NEWEDEEILDTLKIVRFDNERYLKKEGESFWVDTDISGPAYIAQKGVDRPKVLSRFLEMS 240 Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 N N + EM +MI + + + + I ++ + I + Sbjct: 241 NVNPVNEMVRMIEVQRAYELNSKTISTHDTLVGRVINEVG 280 >gi|197120124|ref|YP_002140551.1| flagellar basal body rod protein FlgF [Geobacter bemidjiensis Bem] gi|197089484|gb|ACH40755.1| flagellar basal body rod protein FlgF [Geobacter bemidjiensis Bem] Length = 238 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 54/242 (22%), Positives = 101/242 (41%), Gaps = 6/242 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + L+ L+ ++RL +++N++N++T GF+ +++F V+ +KN Q F Sbjct: 1 MNSGIYAALSGNLSAQRRLDVISNNLANSNTSGFKADQIQFESVLANVKNPTQQAPVFSN 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + LD AL+GD +F + +P+G TR G F + G LV+A G Sbjct: 61 DRYSTDYSPGAMQRTEN-ALDVALDGDGFFVVNTPQGPAYTRQGNFFRSQAGRLVNADGF 119 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 S+ + GE+ G + T+ + G+ Sbjct: 120 EVQGSGGSIA----IGGGKVEIAGNGEVVVNGATVGTLSKVDFPKPYQLTK-IGGGLFVP 174 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 P + +VK+G+LE SN + EM +MI ++ F + + + +A+ Sbjct: 175 ANPQAAPAPTQASVKQGYLESSNVKVVVEMARMIEASRYFETCAKAVKSYDDMTAKAVNE 234 Query: 241 IA 242 + Sbjct: 235 LG 236 >gi|221069320|ref|ZP_03545425.1| flagellar basal-body rod protein FlgG [Comamonas testosteroni KF-1] gi|220714343|gb|EED69711.1| flagellar basal-body rod protein FlgG [Comamonas testosteroni KF-1] Length = 260 Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats. Identities = 45/259 (17%), Positives = 91/259 (35%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S I A + +L ++ N++N T G++ F +++ + Sbjct: 1 MINSLFIAKTGMEAQQTQLDVISHNLANVSTTGYKRANAVFEDLIYQNLRQSGSQTTEQN 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 V + + GS + LD A+ G+ +F + P I TRDG F Sbjct: 61 QLPTGLHLGLGVRTVATSRNFLQGSLQQSSNALDVAINGNGFFEVNMPDGTIAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V G LV++SG + V + + + + Sbjct: 121 EVDSQGQLVTSSGLPVANGITIPQGATKVSISHDGVVSVTMPGQAAPQQVGNIAMSQFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 + G R + + + T +++G+LE SN N + E+ MI + + Sbjct: 181 AAGLEPRGQNLYVETASSGQPQQGTPGTNGLGTIQQGYLEASNVNVVQELVTMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + I +++ + + + Sbjct: 241 EMNSKAIQTSDQMLAKLAQ 259 >gi|323703177|ref|ZP_08114830.1| fagellar hook-basal body protein [Desulfotomaculum nigrificans DSM 574] gi|323531836|gb|EGB21722.1| fagellar hook-basal body protein [Desulfotomaculum nigrificans DSM 574] Length = 256 Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats. Identities = 54/253 (21%), Positives = 104/253 (41%), Gaps = 14/253 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN--------DI 52 M S G++ + R+ V +N++N +T GF+ +V F + + + Sbjct: 1 MIRSLYSGVSGLKNHQIRMDVVGNNIANVNTNGFKASRVNFQDAISQTMRSASGTPAINP 60 Query: 53 DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDG 112 Q + V G ++ G +TG LD A++G+ +F L TR+G F + + Sbjct: 61 SQIGTGVKVGGISINAGQGPLQNTGRTLDLAIQGNGYFILTDGTNKYYTREGTFFIDINN 120 Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI--ATMGLYSVDMSQGFV 170 +L+++ G ++ ++GEI GK +G+ + + G Sbjct: 121 NLINSDGLQVCDTSGKAITLQTTPVNTISINDQGEIFVNGKTTSEGQVGIATCNNPAGLE 180 Query: 171 RRENSGI----SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 R N+ + P +G T+ G+LE SN + EM MI + + + + Sbjct: 181 RVGNNLYKESLASGTPTPGTARAAGSTINSGYLEMSNVDLTEEMTNMITTQRGYQANARV 240 Query: 227 IDENEKSMLEAIR 239 I ++ + E I+ Sbjct: 241 ITVSDTLLEELIQ 253 >gi|302392940|ref|YP_003828760.1| flagellar basal-body rod protein FlgF [Acetohalobium arabaticum DSM 5501] gi|302205017|gb|ADL13695.1| flagellar basal-body rod protein FlgF [Acetohalobium arabaticum DSM 5501] Length = 245 Score = 172 bits (435), Expect = 4e-41, Method: Composition-based stats. Identities = 52/248 (20%), Positives = 108/248 (43%), Gaps = 11/248 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKND---IDQ 54 M + A +R + + +N++N+ T G++ + FSE++ D I Sbjct: 1 MLRGLYTAASGMNASLKRTNIITNNLANSTTPGYKKDQTVNKSFSEMLLRRMPDKEVIGT 60 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSL 114 + GS T D+A+EG+ +FA+++P GI TR G F + DG + Sbjct: 61 AGLGAKVDETVTDFSAGSVHKTDNPFDWAIEGEGFFAVQTPEGIRYTRSGDFTLNQDGQV 120 Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174 V+ +G + + + E NV + + G+V+ + + + + G V+ + Sbjct: 121 VTQNGNFVL----GQAGPLEVVGEQVNVDNQNNLVVDGQVVDQVRVVTFAENDGLVKEGD 176 Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 P + ++ + +G+LE SN N + M MI T+ + S ++ ++S+ Sbjct: 177 DLYRAT-PDVGNQFMATGKINQGYLESSNVNVVESMTNMIEATRHYESNQRVVKAYDQSL 235 Query: 235 LEAIRNIA 242 + + ++ Sbjct: 236 DKTVNSVG 243 >gi|326792666|ref|YP_004310487.1| flagellar basal-body rod protein FlgF [Clostridium lentocellum DSM 5427] gi|326543430|gb|ADZ85289.1| flagellar basal-body rod protein FlgF [Clostridium lentocellum DSM 5427] Length = 255 Score = 172 bits (435), Expect = 4e-41, Method: Composition-based stats. Identities = 55/257 (21%), Positives = 106/257 (41%), Gaps = 19/257 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVG----------A 47 M +RL ++++++NT T G++ F EV+ Sbjct: 1 MVRGLYTAATGMNVQAKRLEIISNDLANTTTTGYKKDVAVVSSFQEVLMTRLNDTQNQVP 60 Query: 48 IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107 I + Y GS ISTG +D A++GD +F +++P G TRDG F Sbjct: 61 NNGPIGNITYGAKIDEVYTDFTQGSVISTGEMVDVAIQGDGFFVVQTPNGEAYTRDGNFS 120 Query: 108 VTDDGSLVSASGKYPVL--DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 + G LV+ G + ++ + + +GE++ G+ I T+ L + Sbjct: 121 INQYGDLVTKEGYPVMGLDGPITLGEEFLTTGGDVVISSQGEVTLDGQYIDTLELARFED 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225 S+ + +N+ S P E + +G+LE +N N + M MI +++ + + Sbjct: 181 SRALTKMDNNLYSSTAARLPFE----GKLIQGYLESANVNPVTAMVDMITVSRAYETNQK 236 Query: 226 LIDENEKSMLEAIRNIA 242 +I + + +A+ + Sbjct: 237 MIQVQDSLLGKAVNELG 253 >gi|313672412|ref|YP_004050523.1| flagellar basal-body rod protein flgg [Calditerrivibrio nitroreducens DSM 19672] gi|312939168|gb|ADR18360.1| flagellar basal-body rod protein FlgG [Calditerrivibrio nitroreducens DSM 19672] Length = 262 Score = 172 bits (435), Expect = 4e-41, Method: Composition-based stats. Identities = 51/261 (19%), Positives = 95/261 (36%), Gaps = 21/261 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + + +A+N++N + +GF+ ++ F +++ Sbjct: 1 MFRAMWTAASGMTAQQMNIDNIANNLANVNNIGFKKSRIHFEDLLYQEMRPAGGPTAAGI 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 Q G+F TG +LD A+EGD +F + P G I TR+G F Sbjct: 61 NHPTGIQIGLGTKVVATEKIFGQGNFQQTGNQLDIAIEGDGFFQVTMPDGTIGYTRNGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 K+ +G++V+A G +A + V + + L Sbjct: 121 KLDSNGNIVTAEGYLLEPAIAVPENATSIIIGQDGTVSVTIPGDTNPTELGAIELARFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + P + T V +G LE SN N EM MI + + Sbjct: 181 PSGLKNIGRNLYQPTAASGEPVTGAPGTDAFGTVAQGILEMSNVNVAEEMVNMITGQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + I +++ + + + N+ Sbjct: 241 ELNSKAIQTSDEML-QVVNNL 260 >gi|253996317|ref|YP_003048381.1| flagellar basal-body rod protein FlgG [Methylotenera mobilis JLW8] gi|253982996|gb|ACT47854.1| flagellar basal-body rod protein FlgG [Methylotenera mobilis JLW8] Length = 260 Score = 172 bits (435), Expect = 4e-41, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 89/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + ++ +++N++N T GF+ + F +++ Sbjct: 1 MIRSLWISKTGLDAQQTQMDVISNNLANVSTNGFKRSRAVFEDLLYQTIRQPGAQTSQQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+ TG + D A++G +F + P TRDG F Sbjct: 61 QLPSGLQLGTGVRPVATERIFTQGNIQQTGNDKDVAIQGAGFFQVLLPDGTTAYTRDGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V G LV++SG + V S I + L + Sbjct: 121 QVDFQGQLVTSSGFSVQPPITVPSNAQTLTVGRDGTVSVTLAGSTAVTQIGQLQLATFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + T + +G++E SN N + E+ MI + + Sbjct: 181 PAGLQGNGENLYVETAASGTANANTPGTNGAGLLTQGYVETSNVNVVEELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + I +++ + + + Sbjct: 241 EINSKAITTSDQMLQKLTQ 259 >gi|157363238|ref|YP_001470005.1| hypothetical protein Tlet_0374 [Thermotoga lettingae TMO] gi|157313842|gb|ABV32941.1| protein of unknown function DUF1078 domain protein [Thermotoga lettingae TMO] Length = 249 Score = 172 bits (435), Expect = 4e-41, Method: Composition-based stats. Identities = 48/250 (19%), Positives = 98/250 (39%), Gaps = 10/250 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV-------VGAIKNDID 53 M L +L A+N++N +TV ++ K+ F + + I Sbjct: 1 MLRGIYTAAMGMLLDMSKLDVTANNLANVETVAYKRDKLAFRAYQDRAIYALPDRRQPIG 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113 +L +G+F+ T +DFA++G+ +F+L G+ +R G FK+ ++G Sbjct: 61 NLTYSAVLDDVFLDSSMGTFMKTDNPMDFAIDGEGFFSLLGEDGVYYSRAGNFKLNEEGY 120 Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRE 173 LV+ G + + + + G VI +G+Y+ D + Sbjct: 121 LVNTDGLMVLDENNQPIRFESSYVVDADGYIR---DPVGNVITRLGIYNFDDPGELRKIG 177 Query: 174 NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 + P + G++E SN N++ EM +I + F + ++++ Sbjct: 178 YTLFQPTEESGQPVVADEFRILSGYVELSNVNAIDEMVNLIEAQRHFEISQKALTVSDET 237 Query: 234 MLEAIRNIAS 243 + + I + S Sbjct: 238 LAKLISQVGS 247 >gi|304310887|ref|YP_003810485.1| Flagellar basal-body rod protein [gamma proteobacterium HdN1] gi|301796620|emb|CBL44832.1| Flagellar basal-body rod protein [gamma proteobacterium HdN1] Length = 261 Score = 172 bits (435), Expect = 4e-41, Method: Composition-based stats. Identities = 49/261 (18%), Positives = 98/261 (37%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + I + A + RLST+++N++N T GF+ F +++ ++ Sbjct: 1 MNAALWISKSGLSAQDLRLSTISNNLANVSTTGFKRDIAVFQDLLYQVQRQPGGQSSQDT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V + G+ +TG LD A+ G +F + P I TRDG F Sbjct: 61 QLPSGLQVGTGVKTVATKKQHTEGTIQTTGQALDVAIMGRGFFQVLMPDGAIAYTRDGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-IATMGLYSVDM 165 +++ +G LV+A G + + K ++ I + L Sbjct: 121 QLSAEGDLVTAEGLSLEPAINVPEGSQSVTIGNDGTVTAVDGQTKQQIEIGNIQLADFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ + + T+++ LE SN N + E+ MI + + Sbjct: 181 PAGLESVGSNLYRETVASGAPTEAQPGTDGTGTLQQNALEASNVNVVEELVNMIETQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + +I ++ + + + Sbjct: 241 EMNSKVISTVDQMLSYVGQQL 261 >gi|253702433|ref|YP_003023622.1| flagellar basal-body rod protein FlgF [Geobacter sp. M21] gi|251777283|gb|ACT19864.1| flagellar basal-body rod protein FlgF [Geobacter sp. M21] Length = 237 Score = 172 bits (435), Expect = 4e-41, Method: Composition-based stats. Identities = 57/242 (23%), Positives = 107/242 (44%), Gaps = 7/242 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + L+ L+ ++RL +++N++N++T GF+ +++F V+ +KN + + Sbjct: 1 MNSGIYAALSGNLSAQRRLDVISNNLANSNTAGFKADQIQFESVLANVKNPTQTPVF--S 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + + G+ T LD AL+GD +F + +P+G TR G F + G LV+A G Sbjct: 59 NDRYSTDYSPGALQRTENALDLALDGDGFFVVNTPQGPAYTRQGNFFRSQAGRLVNADGF 118 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 ++ V GE+ G +AT+ + G+ Sbjct: 119 EVQGSGGAIA----IGGGKVEVSGNGEVVVNGATVATLSKVDFPKPYQLTK-IGGGLFVP 173 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 P + TVK+G+LE SN + EM +MI ++ F + T + + +A+ Sbjct: 174 ANPQAAPAPTAATVKQGYLESSNVKVVVEMARMIEASRYFETCTKAVKSYDDMTAKAVNE 233 Query: 241 IA 242 + Sbjct: 234 LG 235 >gi|49082998|gb|AAT50899.1| PA1082 [synthetic construct] Length = 262 Score = 172 bits (435), Expect = 4e-41, Method: Composition-based stats. Identities = 50/262 (19%), Positives = 99/262 (37%), Gaps = 20/262 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M ++ + A L+T+++N++N T GF+ + +F +++ I+ Sbjct: 1 MLSALWVSKTGLSAQGMNLTTISNNLANVSTTGFKRDRAEFQDLLYQIRRQPGGQSTQDS 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 Q + V GS +T LD A+ G +F + P G + TRDG F Sbjct: 61 ELPSGLQLGTGVRVVGTQKIFTPGSLQTTEQPLDMAVNGRGFFQVLLPDGTVSYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 + DG +V+++G + Q + V + + +VI + Sbjct: 121 HLNSDGQIVTSNGFALEPVIVVPNETQTFTVGQDGTVSVTTTGNAQPQVIGNIQTADFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G N+ + + TV + LE+SN N + E+ MI + + Sbjct: 181 PAGLQAIGNNLFLETGSSGAPQVGTPGLNGLGTVAQNTLENSNVNVVEELVNMITTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNIA 242 + +I ++ + +N+ Sbjct: 241 EMNSKVISTADQMLSFVTQNLG 262 >gi|315121852|ref|YP_004062341.1| flagellar basal body rod protein FlgF [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495254|gb|ADR51853.1| flagellar basal body rod protein FlgF [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 243 Score = 172 bits (435), Expect = 4e-41, Method: Composition-based stats. Identities = 181/241 (75%), Positives = 213/241 (88%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 MQ+SFNIGL+AQ+ALE+RLSTVADN+SN++T GFR IKVKFSEV+ +IKNDIDQKISFVA Sbjct: 1 MQSSFNIGLSAQIALEKRLSTVADNISNSNTSGFRAIKVKFSEVINSIKNDIDQKISFVA 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 G EYLSK+ GS +TG ELDFALEGDAWF+L++PRGIILTRDGRFK+ +DG+L+S+SG+ Sbjct: 61 QGNEYLSKQNGSLTNTGGELDFALEGDAWFSLQTPRGIILTRDGRFKIREDGTLISSSGR 120 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 YPVLDM PI IP KDE F VGE+GEISQKGK IA MG YS D+S+GFVRRENSGI PN Sbjct: 121 YPVLDMEGAPIHIPHKDEAFEVGEEGEISQKGKKIAAMGFYSADLSKGFVRRENSGIFPN 180 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 IPP P+ D S +TVKRG++EDSNANSMYEMGQMIHLTQKFNSIT LID+++KS LEAI+N Sbjct: 181 IPPVPVLDPSDITVKRGYIEDSNANSMYEMGQMIHLTQKFNSITELIDDSDKSFLEAIKN 240 Query: 241 I 241 + Sbjct: 241 L 241 >gi|291280521|ref|YP_003497356.1| flagellar basal-body rod protein FlgG [Deferribacter desulfuricans SSM1] gi|290755223|dbj|BAI81600.1| flagellar basal-body rod protein FlgG [Deferribacter desulfuricans SSM1] Length = 254 Score = 171 bits (434), Expect = 5e-41, Method: Composition-based stats. Identities = 56/253 (22%), Positives = 102/253 (40%), Gaps = 13/253 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + LA ++L +++N++N +T ++ F + + K Sbjct: 1 MLNGLYTATSGMLAQNRKLEIISNNLANINTTSYKREDAIFRDYLYHDKRTPQDIIKASE 60 Query: 54 ---QKISFVASGKEYLSKEVGSFISTGTELDFALEG-DAWFALESPRGIILTRDGRFKVT 109 + V+ Y G+ TG D ALE + +FA+E+P GI TRDG F + Sbjct: 61 YNKTINNTVSLDSIYTDFSPGNLRQTGNRFDLALENKNTFFAVETPFGIRFTRDGHFTLD 120 Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169 D LV+ G + I D + E GEI G ++ + + VD Sbjct: 121 KDRRLVNQDGFPVLSRNFENNEGIILPDGEVTITENGEIMVDGVILDQLFIAEVDDPSKM 180 Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 + + + ++ + V++G+LE SN N + EM MI + F + +I Sbjct: 181 QKMGRNLYA--AIGFMPDESTNPGVRQGYLEGSNVNPVKEMVSMIESMRGFETYQKVIQT 238 Query: 230 NEKSMLEAIRNIA 242 ++ ++ +I Sbjct: 239 IDEINSKSSNDIG 251 >gi|120554035|ref|YP_958386.1| flagellar basal body rod protein FlgG [Marinobacter aquaeolei VT8] gi|120323884|gb|ABM18199.1| flagellar basal-body rod protein FlgG [Marinobacter aquaeolei VT8] Length = 262 Score = 171 bits (434), Expect = 5e-41, Method: Composition-based stats. Identities = 47/262 (17%), Positives = 91/262 (34%), Gaps = 20/262 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + +ST+++N++N +T GF+ K F +++ I Sbjct: 1 MNPALWVSKTGLSAQDINMSTISNNLANVNTTGFKRDKAVFQDLLYQINRQPGGLSTQNS 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+ T LD A+ G + + P I TRDG+F Sbjct: 61 ELPSGLQLGTGVRVVGTVKQFSQGNLQITEQPLDMAINGRGFLQILLPDGQIAYTRDGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 ++ +G +V+ G + V + + + L Sbjct: 121 QLNVNGDVVNPDGYLLEPAINVPNNATNITIGTDGTVTAITDDQAAPVNVGQITLVDFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 QG N+ I + T+++G LE SN + E+ MI + + Sbjct: 181 PQGLQAIGNNLFKETISSGNPIEGQAGLLGLGTIEQGSLEASNVEVVEELVNMITTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNIA 242 + ++ ++ + NI Sbjct: 241 EMNSKVVSTADQMLQFITNNIG 262 >gi|320537132|ref|ZP_08037104.1| flagellar basal-body rod protein FlgG [Treponema phagedenis F0421] gi|320146005|gb|EFW37649.1| flagellar basal-body rod protein FlgG [Treponema phagedenis F0421] Length = 264 Score = 171 bits (434), Expect = 5e-41, Method: Composition-based stats. Identities = 47/260 (18%), Positives = 92/260 (35%), Gaps = 22/260 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S + + + + TVA+N++N +T GF+ + +F +++ Sbjct: 1 MIRSLWTAASGMNSQQANIDTVANNLANVNTSGFKKQRAEFEDLLYQTVKSAGTPATEDT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q E G+ TG D A+ G+ +F + G TRDG F Sbjct: 61 ITPVGIQMGHGSKLAATQRIFEQGALQHTGLTSDVAVAGEGFFRVLQYDGTYAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI---SQKGKVIATMGLYSV 163 K+ D LV+++G + ++ + + I G + + + LY Sbjct: 121 KIDADRQLVTSNGLRVLPEIIFPENYVERSIAISQDGRVTVRVGEEDEPIDVGQIELYRF 180 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 + G ++ + FLE SN +++ EM MI + Sbjct: 181 QNNAGLAAEGSNLFKQTPASGQAIPGRPGFNGFGKTEHKFLEMSNVSTVSEMVNMIVAQR 240 Query: 219 KFNSITTLIDENEKSMLEAI 238 + + I ++ + A+ Sbjct: 241 AYEFNSKAIQTSDNMLGTAV 260 >gi|51599026|ref|YP_073214.1| flagellar hook-basal body complex protein [Borrelia garinii PBi] gi|51573597|gb|AAU07622.1| flagellar hook-basal body complex protein [Borrelia garinii PBi] Length = 282 Score = 171 bits (434), Expect = 6e-41, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 102/280 (36%), Gaps = 38/280 (13%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51 M + +A +L V++N++N D +G++ F E++ ND Sbjct: 1 MVRGIYTAASGMMAERHKLDVVSNNLANIDLIGYKKDLSIQKAFPEMLIRRLNDDGLYKF 60 Query: 52 ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101 + + + V + Y E G +T LD AL +F +++ G T Sbjct: 61 PKGHLETAPIVGKLGTGVEENEIYTLFEQGPLKTTSNPLDLALTDQGFFVIQTSDGERYT 120 Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV------- 154 R+G F + +G LV+ SG + + + ++ S + Sbjct: 121 RNGSFTIGKEGILVTKSGFPVLGEKGYIYLKKNNFKITPQGQIFHNSSFESNPKRLVSEH 180 Query: 155 ---------IATMGLYSVDMSQGFVRRENSGIS---PNIPPTPLEDLSGVTVKRGFLEDS 202 + T+ + + + + ++ NS + ++ ++ G LE S Sbjct: 181 ENSWENYELLDTIRIVNFENPRFLKKQGNSLWVDTKTSGKAQEIDISLRPKIETGALEAS 240 Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 N N++ EM MI + + + + I + + + I I Sbjct: 241 NVNAVKEMVLMIEINRAYEANQKTIQTEDSLLGKLINEIG 280 >gi|294635612|ref|ZP_06714089.1| flagellar basal-body rod protein FlgG [Edwardsiella tarda ATCC 23685] gi|291091064|gb|EFE23625.1| flagellar basal-body rod protein FlgG [Edwardsiella tarda ATCC 23685] Length = 260 Score = 171 bits (434), Expect = 6e-41, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 86/259 (33%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + + +A+N++N T GF+ + F +++ Sbjct: 1 MIRSLYIAKTGLEAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTLRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+ T D A++G +F + P TRDG F Sbjct: 61 TLPSGLQLGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVTLPDGSQAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V +G LV+ASG + V + + + + L + Sbjct: 121 QVDQNGQLVTASGFQVSPAITIPANATSMTIGRDGIVSVTVQGQAAAQQVGQLTLSTFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + +G++E SN N E+ MI + + Sbjct: 181 DAGLESVGENLYQETDSSGAPTESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + I +++ + + Sbjct: 241 EINSKAISTSDQMLQRLTQ 259 >gi|149194278|ref|ZP_01871375.1| flagellar basal-body rod protein distal rod protein [Caminibacter mediatlanticus TB-2] gi|149135453|gb|EDM23932.1| flagellar basal-body rod protein distal rod protein [Caminibacter mediatlanticus TB-2] Length = 262 Score = 171 bits (434), Expect = 6e-41, Method: Composition-based stats. Identities = 46/261 (17%), Positives = 100/261 (38%), Gaps = 21/261 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S +A + ++ V++N+SN +T+G++ + +F+++ Sbjct: 1 MVRSLYTAATGMMAQQTQIDVVSNNISNVNTIGYKKQRAEFADLFYQTMEYAGTATSTTT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 V G+ T LD A++GD +F ++ P I TRDG F Sbjct: 61 KSPTGINVGLGVRPTAITKIFTQGNLKQTNNNLDLAIQGDGFFQVQLPDGRIGYTRDGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 K+ DG++V++ G + ++ P + V + + I + L Sbjct: 121 KLDADGNIVTSDGYKLIPNITLPPDTVQVSIGTDGTVSILQAGQTQMQQIGQIQLAKFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ +++GF+E SN + EM +I + + Sbjct: 181 PAGLHSLGSNLYINTSASGDPIVDVPGQTGLGEIRQGFIEMSNVQLVEEMTDLITGQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 ++ + I +++ + + + N+ Sbjct: 241 DAASKAIMTSDEML-QTVNNL 260 >gi|322380502|ref|ZP_08054691.1| flagellar basal body rod protein FlgG [Helicobacter suis HS5] gi|321147069|gb|EFX41780.1| flagellar basal body rod protein FlgG [Helicobacter suis HS5] Length = 262 Score = 171 bits (434), Expect = 6e-41, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 92/261 (35%), Gaps = 21/261 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S L + + T ++N++N +TVGF+ + F+++ Sbjct: 1 MLRSLYSATTGMLGQQTHIDTTSNNIANVNTVGFKRQRADFNDLFYQALQYAGTSTSDTT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 V + GS T LD A+ G +F ++ P TR G F Sbjct: 61 RSPNGIEVGLGVRTASVTKMFSQGSPKETENNLDIAITGKGFFQIQMPDGSTAYTRAGNF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGE-ISQKGKVIATMGLYSVDM 165 K+ D G++V+ G + + + + + VI + L + Sbjct: 121 KIDDQGNMVTTEGYLLIPQITFPQDTTQISIGVDGTVSVTQGNASTSNVIGQITLANFIN 180 Query: 166 SQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ ++ P +++GFLE SN + EM +I + + Sbjct: 181 PAGLHALGDNLLAVTSASGPAIVGNANSDGYGQLRQGFLELSNVRLVEEMTDLITAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + + I + + + + ++ Sbjct: 241 EANSKTIQTADNML-QTVNSL 260 >gi|254505064|ref|ZP_05117215.1| flagellar basal-body rod protein FlgG [Labrenzia alexandrii DFL-11] gi|222441135|gb|EEE47814.1| flagellar basal-body rod protein FlgG [Labrenzia alexandrii DFL-11] Length = 262 Score = 171 bits (434), Expect = 6e-41, Method: Composition-based stats. Identities = 47/262 (17%), Positives = 91/262 (34%), Gaps = 21/262 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----------- 50 + I A + + VA+N++N +T F+ + +FS+++ + Sbjct: 1 MKALAIAATGMSAQQLNVEVVANNIANMNTTSFKRAQAEFSDLLYQAERLQGVPNRGGED 60 Query: 51 ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 + Q V + G +TG + D AL+G WF + P + TR G F Sbjct: 61 PVPEGAQLGLGVKTAGIRKLHMQGPLTNTGNQFDIALDGRGWFEITGPDDESLYTRAGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQ-KDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 DG LV+ G + I +E V K + + + I + L + Sbjct: 121 NKNADGRLVTIDGYTVEPAIIVPEETIEVVINETGQVYSKIDGEIQPREIGQLSLANFAN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + V++G+LE SN + + E+ +I + + Sbjct: 181 DVGLEPVGGNLFRETPASGAPVAGVPGDPGFGVVRQGYLESSNVDPVKEITALISAQRGY 240 Query: 221 NSITTLIDENEKSMLEAIRNIA 242 + ++ ++ I Sbjct: 241 EMNSKVMKAADEMANTVTNGIR 262 >gi|146277706|ref|YP_001167865.1| flagellar basal-body rod protein FlgG [Rhodobacter sphaeroides ATCC 17025] gi|145555947|gb|ABP70560.1| flagellar basal-body rod protein FlgG [Rhodobacter sphaeroides ATCC 17025] Length = 262 Score = 171 bits (434), Expect = 6e-41, Method: Composition-based stats. Identities = 39/259 (15%), Positives = 90/259 (34%), Gaps = 20/259 (7%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------- 55 + ++ A + R+ +++N++N +T GF+ + F ++ + Sbjct: 4 NAMHVAKTGLNAQQTRMQVISNNLANVNTTGFKRDRANFESLLYQTWKPGGAQTSEATAM 63 Query: 56 ------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKV 108 + V GS +T LD A++G +F + P G + TR+G F Sbjct: 64 TSPSAVGTGVRVVSTEKLYTQGSLANTDNALDLAIDGPGFFQVLLPDGRMGYTRNGTFSQ 123 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDMSQ 167 +G++ + SG ++ + V + + + + + + + Sbjct: 124 NAEGTITTPSGYVVQPEIQIPEGAVSVTISADGIVSVLMPDETEAQEVGQITIATFANPR 183 Query: 168 GFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222 G + + + +G LE SN N + E+ MI + + Sbjct: 184 GLQPVGETFAVETAASGEAAIGNPVEPGFGKLVQGALESSNVNVVQELVDMIETQRAYEV 243 Query: 223 ITTLIDENEKSMLEAIRNI 241 + I +++ M + Sbjct: 244 NSKSISASDEMMQYLANKL 262 >gi|269138584|ref|YP_003295284.1| flagellar basal body rod protein [Edwardsiella tarda EIB202] gi|267984244|gb|ACY84073.1| flagellar basal body rod protein [Edwardsiella tarda EIB202] gi|304558594|gb|ADM41258.1| Flagellar basal-body rod protein FlgG [Edwardsiella tarda FL6-60] Length = 260 Score = 171 bits (434), Expect = 6e-41, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 86/259 (33%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + + +A+N++N T GF+ + F +++ Sbjct: 1 MIRSLYIAKTGLEAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTLRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+ T D A++G +F + P TRDG F Sbjct: 61 TLPSGLQLGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVTLPDGSQAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V +G LV+ASG + V + + + + L + Sbjct: 121 QVDQNGQLVTASGFQVTPAITIPANATSMTIGRDGIVSVTLQGQAAAQQVGQLTLSTFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + +G++E SN N E+ MI + + Sbjct: 181 DAGLESVGENLYQETESSGAPTESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + I +++ + + Sbjct: 241 EINSKAISTSDQMLQRLTQ 259 >gi|203284668|ref|YP_002222408.1| flagellar basal-body rod protein [Borrelia duttonii Ly] gi|201084111|gb|ACH93702.1| flagellar basal-body rod protein [Borrelia duttonii Ly] Length = 265 Score = 171 bits (433), Expect = 6e-41, Method: Composition-based stats. Identities = 50/263 (19%), Positives = 94/263 (35%), Gaps = 23/263 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + + A + + T+A+N+SN +T+GF+ I+ +F +++ + Sbjct: 1 MMRALWTSASGMKAQQYNVDTIANNLSNVNTIGFKKIRAEFEDLIYQTQRRAGTPATENT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 + E G+ T D A+EGD ++ + G TRDG F Sbjct: 61 VTPLGNQVGHGTKVSATHRLFEQGNLQVTNLNTDVAIEGDGFYKVLLSDGTYGYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG---KVIATMGLYSV 163 K+ +G+LV+ G + +++ I I G +G + + + Sbjct: 121 KIDANGNLVTNQGYILLPEISFPEEYIKNSIAISQEGIISVKVNEGLEPIELGQIEIARF 180 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 G N+ I +K+G LE SN EM MI + Sbjct: 181 VNPAGLNAIGNNIFKETIGSGEEISGIPGSNGMGKLKQGMLEMSNVAIAEEMVTMIVAQR 240 Query: 219 KFNSITTLIDENEKSMLEAIRNI 241 + + I ++ + N+ Sbjct: 241 AYEINSKAIHTSDNMLG-IANNL 262 >gi|21242725|ref|NP_642307.1| flagellar basal body rod protein FlgG [Xanthomonas axonopodis pv. citri str. 306] gi|78047584|ref|YP_363759.1| flagellar basal body rod protein FlgG [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|294624042|ref|ZP_06702805.1| flagellar biosynthesis cell-distal portion of basal-body rod [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294665577|ref|ZP_06730858.1| flagellar biosynthesis cell-distal portion of basal-body rod [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|325927973|ref|ZP_08189194.1| flagellar basal-body rod protein FlgG [Xanthomonas perforans 91-118] gi|21108201|gb|AAM36843.1| flagellar biosynthesis cell-distal portion of basal-body rod [Xanthomonas axonopodis pv. citri str. 306] gi|78036014|emb|CAJ23705.1| flagella basal body rod protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|292601661|gb|EFF45635.1| flagellar biosynthesis cell-distal portion of basal-body rod [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292604675|gb|EFF48045.1| flagellar biosynthesis cell-distal portion of basal-body rod [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|325541658|gb|EGD13179.1| flagellar basal-body rod protein FlgG [Xanthomonas perforans 91-118] Length = 261 Score = 171 bits (433), Expect = 6e-41, Method: Composition-based stats. Identities = 49/261 (18%), Positives = 91/261 (34%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + R+S +++N++NT+T GF+ + F +++ Sbjct: 1 MNQALWVAKTGLDAQQTRMSVISNNLANTNTTGFKRDRAAFEDLLYQQVRAPGGSTSAQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V + + GS TG LD + G +F ++ P G TRDG F Sbjct: 61 QLPTGLQLGTGVRVVSTFKGFDQGSQQQTGRALDVMVNGRGFFEVQMPDGTSAYTRDGTF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165 ++ G LV+ SG + + I + L Sbjct: 121 QINAQGELVTNSGYPLQPGIQVPEGAQSLTIGNDGTISVTLAGQAAAQEIGALTLTDFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + P ++ + T +G LE SN N++ E+ MI + + Sbjct: 181 PSGLQAKGENLFVETTASGPAQNGTPGLNGLGTTVQGALEGSNVNTVEELVSMIETQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 I + + N+ Sbjct: 241 EMNAKAISTTDSMLGYLNNNV 261 >gi|325923276|ref|ZP_08184949.1| flagellar basal-body rod protein FlgG [Xanthomonas gardneri ATCC 19865] gi|325546203|gb|EGD17384.1| flagellar basal-body rod protein FlgG [Xanthomonas gardneri ATCC 19865] Length = 261 Score = 171 bits (433), Expect = 7e-41, Method: Composition-based stats. Identities = 48/261 (18%), Positives = 91/261 (34%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + R+S +++N++NT+T GF+ + F +++ Sbjct: 1 MNQALWVAKTGLDAQQTRMSVISNNLANTNTTGFKRDRAAFEDLLYQQVRAPGGSTSAQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V + + GS TG LD + G +F ++ P G TRDG F Sbjct: 61 QLPTGLQLGTGVRVVSTFKGFDQGSQQQTGRALDVMVNGRGFFEVQMPDGTSAYTRDGTF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165 ++ G +V+ SG + + I + L Sbjct: 121 QINAQGEVVTNSGYPLQPGIQVPEGAQSLTIGNDGTISVTLAGQAAAQEIGALTLTDFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + P ++ + T +G LE SN N++ E+ MI + + Sbjct: 181 PSGLQSKGENLFVETTASGPAQNGTPGLNGLGTTVQGALEGSNVNTVEELVSMIETQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 I + + N+ Sbjct: 241 EMNAKAISTTDSMLGYLNNNV 261 >gi|300870897|ref|YP_003785768.1| flagellar hook-basal body complex protein FlhO [Brachyspira pilosicoli 95/1000] gi|300688596|gb|ADK31267.1| flagellar hook-basal body complex protein, FlhO [Brachyspira pilosicoli 95/1000] Length = 282 Score = 171 bits (433), Expect = 7e-41, Method: Composition-based stats. Identities = 56/280 (20%), Positives = 102/280 (36%), Gaps = 38/280 (13%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS---EVVGAIKND------ 51 M G + +A + RL VA+N++N D GF+ F E++ A D Sbjct: 1 MVRGVYTGASGMIAEQYRLDVVANNLANVDKPGFKRDTATFKAFPEMMAARTEDDGVVIF 60 Query: 52 ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101 + + + V + + E GS TG +LD AL +FA+E+P G T Sbjct: 61 PLGSTDIRPYVGRLGTGVEVNEVFTEWEQGSLRETGNQLDIALGDKGFFAVETPHGERYT 120 Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKD---------------EIFNVGEKG 146 R+G F + D LV+ G + + + I+ + V Sbjct: 121 RNGSFLIDKDNYLVTKHGYKVMGENGYIQIKSNNFNIDEEGRISINRRYQDNEDFVQFND 180 Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV----TVKRGFLEDS 202 + +++ T+ + + + + S P V FLE S Sbjct: 181 NEWEDEEILDTLKIVRFENERYLKKEGESFWVDTDISGPAYIAQKGVDRPKVLSRFLEMS 240 Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 N N + EM +MI + + + + I ++ + + + Sbjct: 241 NVNPINEMVRMIEVQRAYELNSKTISTHDTLIGRVVNEVG 280 >gi|238794000|ref|ZP_04637618.1| Flagellar basal-body rod protein flgG [Yersinia intermedia ATCC 29909] gi|238726632|gb|EEQ18168.1| Flagellar basal-body rod protein flgG [Yersinia intermedia ATCC 29909] Length = 260 Score = 171 bits (433), Expect = 7e-41, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 91/259 (35%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + + +A+N++N T GF+ + F +++ Sbjct: 1 MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTMRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V G+ T D A++G+ +F ++ P G TRDG F Sbjct: 61 TLPSGLQIGTGVRPVATERLHSQGNLSKTDNTKDIAIKGEGFFQVQMPDGTNAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQI-PQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V +G LV++ G + + V + + + + L + Sbjct: 121 QVDQNGQLVTSGGFQVQPAITIPANALSMTVGRDGIVSVTLQGQTATQQVGQLTLTTFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 + G + + G + +G++E SN N E+ MI + + Sbjct: 181 NSGLESIGENLYQETASSGAPNETTPGLNGGGLLYQGYVETSNVNVAEELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + + Sbjct: 241 EINSKAVSTSDQMLQKLTQ 259 >gi|238799109|ref|ZP_04642565.1| Flagellar basal-body rod protein flgG [Yersinia mollaretii ATCC 43969] gi|238717056|gb|EEQ08916.1| Flagellar basal-body rod protein flgG [Yersinia mollaretii ATCC 43969] Length = 260 Score = 171 bits (433), Expect = 7e-41, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 91/259 (35%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + + +A+N++N T GF+ + F +++ Sbjct: 1 MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTMRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V G+ T D A++G+ +F ++ P G TRDG F Sbjct: 61 TLPSGLQIGTGVRPVATERLHSQGNLSKTDNTKDIAIKGEGFFQVQMPDGTNAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQI-PQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V +G LV++ G + + V + + + + L + Sbjct: 121 QVDQNGQLVTSGGFQVQPAITVPANALSMTVGRDGIVSVTLQGQTATQQVGQLTLTTFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 + G + + G + +G++E SN N E+ MI + + Sbjct: 181 NSGLESIGENLYQETASSGAPNETTPGLNGGGLLYQGYVETSNVNVAEELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + + Sbjct: 241 EINSKAVSTSDQMLQKLTQ 259 >gi|317050615|ref|YP_004111731.1| flagellar basal-body rod protein FlgG [Desulfurispirillum indicum S5] gi|316945699|gb|ADU65175.1| flagellar basal-body rod protein FlgG [Desulfurispirillum indicum S5] Length = 262 Score = 171 bits (433), Expect = 7e-41, Method: Composition-based stats. Identities = 45/259 (17%), Positives = 90/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + +A + + +++N++N +T GF+ +V+F +++ Sbjct: 1 MIRALWTASTGMMAQQTHIDNISNNLANVNTGGFKKSRVEFQDLMYQTIKPAGASTAAGI 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 Q V GS I TG +LD +E D +F ++ P G TR+G F Sbjct: 61 TRPVGEQLGLGVKVAGITKMHTQGSIIQTGNQLDMTIEKDGYFQIQMPDGTTGYTRNGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 ++G +V+ G + + V + + + + + Sbjct: 121 TKNNNGEIVTVEGFLLEPGIQIPDDAVEIYVGRDGTVSVQIGNQNQMQELGQITTAKFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + S + +GFLE SN + EM MI + + Sbjct: 181 PAGLESVGGNIFKETSASGAPQVGIPGEDSFGAIAQGFLEQSNVQLVEEMVNMISAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + I ++ + A + Sbjct: 241 EINSKAITTGDEMLQTATQ 259 >gi|91776311|ref|YP_546067.1| flagellar basal-body rod FlgG [Methylobacillus flagellatus KT] gi|91710298|gb|ABE50226.1| Flagellar basal-body rod FlgG [Methylobacillus flagellatus KT] Length = 261 Score = 171 bits (433), Expect = 7e-41, Method: Composition-based stats. Identities = 48/260 (18%), Positives = 87/260 (33%), Gaps = 21/260 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + ++ +A+N++N T GF+ + F +++ Sbjct: 1 MIRSLWIAKTGLDAQQMQMDVIANNLANVSTNGFKKTRAVFEDLLYQNIRQPGAQSSQQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+ TG D A+ G+ +F + P TRDG F Sbjct: 61 QLPSGLQLGTGVRPVATERIHIQGNLQQTGNNKDVAISGEGFFQVLLPDGSTAYTRDGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPI--QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 ++ + G LV+ASG + P + + + I T L + Sbjct: 121 QLDNQGQLVTASGFTVQPAIIVPPNALSLTVGRDGTVSVVLPDNPNNAVQIGTFQLATFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G R + P + +LE SN N E+ MI + Sbjct: 181 NPAGLQSRGENLYIETAASGPANINQPGLNGTGLLVHQYLETSNVNVAEELVSMIQTQRA 240 Query: 220 FNSITTLIDENEKSMLEAIR 239 + + I +++ + + Sbjct: 241 YEINSKAISTSDQMLQRLSQ 260 >gi|320536024|ref|ZP_08036083.1| putative flagellar basal-body rod protein FlgF [Treponema phagedenis F0421] gi|320147123|gb|EFW38680.1| putative flagellar basal-body rod protein FlgF [Treponema phagedenis F0421] Length = 271 Score = 171 bits (433), Expect = 7e-41, Method: Composition-based stats. Identities = 50/267 (18%), Positives = 100/267 (37%), Gaps = 26/267 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51 M + + A +Q+L +++N++N DT ++ F E++ ND Sbjct: 1 MIRGWYTAASGMNAQQQQLDVISNNLANVDTTSYKRDVTINKNFPELLLRRTNDDGVIKN 60 Query: 52 ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101 I + V + + E GS T + D ALEG +FA+++P+ T Sbjct: 61 PFGSSDAAPIIGKLGLGVEVNEVFTEFEQGSLKQTHSPSDIALEGKGFFAVQTPQREEYT 120 Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMA----SVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157 R+G F V +G L++ G + + ++ E + Sbjct: 121 RNGNFLVGVEGYLMTKEGYPVLGENGRIFLQDMEYKINQNGEIYARPITEPDTDAVFLDR 180 Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPL---EDLSGVTVKRGFLEDSNANSMYEMGQMI 214 + + + + + ++ +S P E +GF+E SN N + EM +MI Sbjct: 181 LKIVTFENDRYLQKKGSSFYLDTPVSGPAIAAEGPDRPVTVQGFIEASNVNVVNEMVRMI 240 Query: 215 HLTQKFNSITTLIDENEKSMLEAIRNI 241 + + + + I + M + + Sbjct: 241 EVNRAYEANQKTIQSEDTMMAKLWNEV 267 >gi|121997317|ref|YP_001002104.1| flagellar basal-body rod protein FlgG [Halorhodospira halophila SL1] gi|121588722|gb|ABM61302.1| flagellar basal-body rod protein FlgG [Halorhodospira halophila SL1] Length = 261 Score = 171 bits (433), Expect = 7e-41, Method: Composition-based stats. Identities = 44/261 (16%), Positives = 88/261 (33%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + + A ++ + ++N++N +T GF+ + F ++ + Sbjct: 1 MDPALWVAKTGLDAQQKSMQVTSNNLANVNTNGFKKDRANFEDLFYQTVRQPGSRASQDN 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 + G+ T LD A+EG + + P G + TRDG Sbjct: 61 LLPSGLMLGTGSRVMGTEKIHSQGNVQQTERSLDVAIEGKGFLQVLRPDGQVGYTRDGAL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 ++ ++G +V++ G + V K ++ + I + L Sbjct: 121 QLNENGEIVTSGGYLLEPGIQVPEEAETISIGSDGTVSAKIPGDEEPEEIGQIELADFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + E + V +G LE SN N E+ MI + F Sbjct: 181 PSGLEPVGENMFLETAASGAPEVGAPGEGALGNVMQGALETSNVNIAEELVNMIENQRGF 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + T I ++ + +N+ Sbjct: 241 ETNTRAISTTDEMLQFLNQNV 261 >gi|21231395|ref|NP_637312.1| flagellar basal body rod protein FlgG [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66768552|ref|YP_243314.1| flagellar basal body rod protein FlgG [Xanthomonas campestris pv. campestris str. 8004] gi|188991639|ref|YP_001903649.1| flagellar basal body rod protein FlgG [Xanthomonas campestris pv. campestris str. B100] gi|325916945|ref|ZP_08179189.1| flagellar basal-body rod protein FlgG [Xanthomonas vesicatoria ATCC 35937] gi|21113060|gb|AAM41236.1| flagellar biosynthesis, cell-distal portion of basal-body rod [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66573884|gb|AAY49294.1| flagellar biosynthesis, cell-distal portion of basal-body rod [Xanthomonas campestris pv. campestris str. 8004] gi|167733399|emb|CAP51600.1| unnamed protein product [Xanthomonas campestris pv. campestris] gi|325536848|gb|EGD08600.1| flagellar basal-body rod protein FlgG [Xanthomonas vesicatoria ATCC 35937] Length = 261 Score = 171 bits (433), Expect = 8e-41, Method: Composition-based stats. Identities = 48/261 (18%), Positives = 91/261 (34%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + R+S +++N++NT+T GF+ + F +++ Sbjct: 1 MNQALWVAKTGLDAQQTRMSVISNNLANTNTTGFKRDRAAFEDLLYQQVRAPGGSTSAQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V + + GS TG LD + G +F ++ P G TRDG F Sbjct: 61 QLPTGLQLGTGVRVVSTFKGFDQGSQQQTGRALDVMVNGRGFFEVQMPDGTSAYTRDGTF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165 ++ G +V+ SG + + I + L Sbjct: 121 QINAQGEVVTNSGYPLQPGIQVPEGAQSLTIGNDGTISVTLAGQAAAQEIGALTLTDFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + P ++ + T +G LE SN N++ E+ MI + + Sbjct: 181 PSGLQAKGENLFVETTASGPAQNGTPGLNGLGTTVQGALEGSNVNTVEELVSMIETQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 I + + N+ Sbjct: 241 EMNAKAISTTDSMLGYLNNNV 261 >gi|226225711|ref|YP_002759817.1| flagellar basal-body rod protein FlgG [Gemmatimonas aurantiaca T-27] gi|226088902|dbj|BAH37347.1| flagellar basal-body rod protein FlgG [Gemmatimonas aurantiaca T-27] Length = 262 Score = 171 bits (433), Expect = 8e-41, Method: Composition-based stats. Identities = 48/262 (18%), Positives = 91/262 (34%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + +A + R +A N++N +T GF+ + F +++ Sbjct: 1 MDPALRAAATGMMAQQTRTEVIAHNLANVNTPGFKRSRAHFEDLLYQTVQGQQVLGENDT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q E G TG LD A+EG+ +F ++ P +RDG Sbjct: 61 QITPAIQVGRGTRLAGVQRLHEQGPIEETGRNLDIAIEGEGFFQIQLPSGETAYSRDGSL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 +++D G LV+++G + V + + I + L Sbjct: 121 QISDQGVLVTSAGYALQPPVRIPDDASEFTVSATGVVSVRRGNDIQPTEIGRIELARFAN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + ++P +++ LE SN + EM +MI + + Sbjct: 181 PSGLLSLGQNLLAPTAASGQPVVGYPNDAGMGRLQQNSLEGSNVEIVQEMVEMIAAMRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNIA 242 + I ++ M + NIA Sbjct: 241 EINSKAIKTADE-MGQIANNIA 261 >gi|297182936|gb|ADI19085.1| flagellar basal body rod protein [uncultured delta proteobacterium HF0070_15B21] Length = 262 Score = 171 bits (433), Expect = 8e-41, Method: Composition-based stats. Identities = 48/259 (18%), Positives = 92/259 (35%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + A ++ + T A+N++N +T G++ KV F +++ + Sbjct: 1 MMRALYTAATGMAAQQRNIDTTANNLANVNTTGYKKSKVHFQDLLYHNERTAGVPSSVST 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 V G+ +TG +LD +++G +F + P GI+ +RDG F Sbjct: 61 QVPVGLHVGHGVKFIGTEKIHTQGNLENTGNDLDLSIDGHGFFQILQPNGIVGYSRDGHF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 + G LV+ G ++ + + V + I ++ L Sbjct: 121 NIDGMGRLVTNDGMLLDPEINIPQDTRKIEVGFDGTVTVFLRDETMPEAIGSIQLARFQN 180 Query: 166 SQGFVRRENSGISP-----NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + N S T+ +GFLE SN + + EM MI + + Sbjct: 181 PAGLTPLGKNLYVSTPASGNAIVDAPGASSMGTLTQGFLERSNVSLVEEMVNMITSQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + I ++ + Sbjct: 241 EVNSKAIQSADEMLKNTNN 259 >gi|224370760|ref|YP_002604924.1| flagellar basal body rod protein FlgG [Desulfobacterium autotrophicum HRM2] gi|223693477|gb|ACN16760.1| FlgG2 [Desulfobacterium autotrophicum HRM2] Length = 260 Score = 171 bits (433), Expect = 8e-41, Method: Composition-based stats. Identities = 45/253 (17%), Positives = 82/253 (32%), Gaps = 18/253 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + A + + VA+N++N+ T GF+ + F +++ Sbjct: 1 MIRALWTSATGMNAQQIQTDVVANNLANSSTAGFKKSRANFQDLMYQTMLVAGATTPGGG 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107 Q V G + TG ELDF ++GD +F + + TR G F Sbjct: 61 QIPTGIQVGMGVRPSGVQKIFTQGDYSQTGNELDFVIQGDGFFRVLHGDEELYTRAGNFT 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 + +G + + SG +++ + + L S Sbjct: 121 LDSEGFITTNSGDRLQPEISIPVEATLISLQDNGTLTVTGADDTILATEQVNLSSFVNPA 180 Query: 168 GFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222 G + P + TV FLE SN + + EM MI + + + Sbjct: 181 GLFAVGENLFRQTEGSGPATEGIPGDAPLGTVANNFLEMSNVSVVEEMVNMIVGQRAYEA 240 Query: 223 ITTLIDENEKSML 235 + I + + Sbjct: 241 NSKSIQTADTMLG 253 >gi|238796906|ref|ZP_04640410.1| Flagellar basal-body rod protein flgG [Yersinia mollaretii ATCC 43969] gi|238719166|gb|EEQ10978.1| Flagellar basal-body rod protein flgG [Yersinia mollaretii ATCC 43969] Length = 260 Score = 171 bits (432), Expect = 8e-41, Method: Composition-based stats. Identities = 40/259 (15%), Positives = 86/259 (33%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + + +++N++N T GF+ + F +++ Sbjct: 1 MIRSLWIAKTGLEAQQTNMDVISNNLANVSTNGFKRQRAVFEDLLYQTLRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+ T D A++G +F ++ +RDG F Sbjct: 61 TIPTGLQLGTGVRPVATERIHSQGNLTQTNNSKDLAIQGHGFFQVQMADGTTAYSRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 + +G LV++SG + V + + + + + Sbjct: 121 QFDQNGQLVTSSGYPVQPAITIPQDADTLTVGNDGIVSVTVPGQTAPQQVGQLTVSTFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + G T+K+G++E SN N E+ MI + + Sbjct: 181 DSGLESIGENLYRETQSSGAPNETTPGLNGGGTLKQGYIETSNVNVAEELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + Sbjct: 241 EINSKAVSTSDQMLQRLTQ 259 >gi|152980126|ref|YP_001353113.1| FlgG flagellar basal body rod protein [Janthinobacterium sp. Marseille] gi|151280203|gb|ABR88613.1| FlgG flagellar basal body rod protein [Janthinobacterium sp. Marseille] Length = 260 Score = 171 bits (432), Expect = 8e-41, Method: Composition-based stats. Identities = 42/259 (16%), Positives = 87/259 (33%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + ++ +++N++N T GF+ + F +++ Sbjct: 1 MIRSLWIAKTGLDAQQTQMDVISNNLANVSTSGFKRSRAVFEDLLYQNIRQPGAASSQQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+ T D A+ GD +F + P TRDG F Sbjct: 61 QLPSGLQIGTGVRPVATERIHTQGNLQLTSNSKDMAILGDGFFQVLMPDGTTAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 + + G +V++SG + V + + + + + Sbjct: 121 QTDNQGQMVTSSGFPIQPAIVIPANATAISISRDGIVSVTVPGTTAQTEVGALQVATFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + T V++ ++E SN N + EM MI + + Sbjct: 181 PAGLESKGENLYVETTASGNPTTNNPGTNGAGYVQQNYVETSNVNVVEEMVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + I +++ + + Sbjct: 241 EINSKAISTSDQMLQRLTQ 259 >gi|322832566|ref|YP_004212593.1| flagellar basal-body rod protein FlgG [Rahnella sp. Y9602] gi|321167767|gb|ADW73466.1| flagellar basal-body rod protein FlgG [Rahnella sp. Y9602] Length = 260 Score = 171 bits (432), Expect = 9e-41, Method: Composition-based stats. Identities = 42/259 (16%), Positives = 92/259 (35%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + + +A+N++N T GF+ + F +++ Sbjct: 1 MIPSLYIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTVRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+ T D A++G+ +F ++ P TRDG F Sbjct: 61 NLPSGLQIGTGVRPVSTERLFSQGNLSQTSNSKDIAVKGEGFFQVQLPDGTTAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQI-PQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V +G LV++SG + + + V + + + + L + Sbjct: 121 QVDQNGQLVTSSGYQVIPAITVPANALSMTVGRDGIVSVTTQGQTAAQQVGQLTLSTFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 + G + + + + +G++E SN N E+ MI + + Sbjct: 181 NSGLESLGENLYQETQSSGAPTESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + + Sbjct: 241 EINSKAVSTSDEMLQKLSQ 259 >gi|163758015|ref|ZP_02165103.1| flagellar basal-body rod protein [Hoeflea phototrophica DFL-43] gi|162284304|gb|EDQ34587.1| flagellar basal-body rod protein [Hoeflea phototrophica DFL-43] Length = 262 Score = 171 bits (432), Expect = 9e-41, Method: Composition-based stats. Identities = 45/262 (17%), Positives = 93/262 (35%), Gaps = 21/262 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + I A + L +A+N++N +T GF+ + +F++++ ++ + Sbjct: 1 MKALAIAATGMNAQQLNLEVIANNVANINTTGFKRARAEFADLLYQVERNQGVPNASNQA 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 V + GS + T + D AL G WF +E+P G TR G F Sbjct: 61 IVPEGAHIGLGVQTSAVRNLHIQGSLVGTSNKFDLALVGRGWFQIETPDGETNYTRAGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE-KGEISQKGKVIATMGLYSVDM 165 DG LV+ G V + + + + + + L + Sbjct: 121 NTNADGELVTIDGYTVVPGIVFPDEASEVVISRTGQVFARIGNEAEMQELGQLTLANFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ P +++G+LE SN + + E+ +I + + Sbjct: 181 EAGLEPLGDNLFRETTASGPANVGVPDDPGFAHIQQGYLEGSNVDPIKEITDLISAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNIA 242 + +I ++ +N+ Sbjct: 241 EMNSKIIQAADEMASTVSKNLR 262 >gi|15887904|ref|NP_353585.1| flagellar basal body rod protein FlgF [Agrobacterium tumefaciens str. C58] gi|2459708|gb|AAB71784.1| FlgF [Agrobacterium tumefaciens] gi|15155496|gb|AAK86370.1| flagellar basal body rod protein [Agrobacterium tumefaciens str. C58] Length = 244 Score = 171 bits (432), Expect = 9e-41, Method: Composition-based stats. Identities = 104/242 (42%), Positives = 159/242 (65%), Gaps = 1/242 (0%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 MQ+ + L++Q+ALE+RL+T++DNM+N +TVGFR +VKF E+V ND++ K++FV+ Sbjct: 1 MQSGLYVALSSQIALERRLTTISDNMANVNTVGFRGSEVKFDEMVAKNHNDMNAKVAFVS 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 G +YLS G+F TG DFA++GDAWFAL++P G ILTRDGRF + DG+L+S+SG Sbjct: 61 QGNDYLSTRQGAFEQTGNSFDFAIKGDAWFALDTPDGQILTRDGRFTMRPDGALISSSGY 120 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 PVLD PI++ VG G I Q + A++G++ D S+GF+R NSG+ P Sbjct: 121 -PVLDAGGGPIRLNPNGGPITVGLDGAIRQNDTIAASLGIFQADFSKGFLRHPNSGVKPV 179 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 P P+ + V V +G+LE SN N + +M Q+I + + F SI++++ + E + E I+ Sbjct: 180 AQPVPVVNNHEVGVVQGYLEQSNVNGISQMTQLIQVNRAFESISSMMRDTESTFGEGIKT 239 Query: 241 IA 242 + Sbjct: 240 LG 241 >gi|190574261|ref|YP_001972106.1| flagellar basal body rod protein FlgG [Stenotrophomonas maltophilia K279a] gi|194365678|ref|YP_002028288.1| flagellar basal body rod protein FlgG [Stenotrophomonas maltophilia R551-3] gi|190012183|emb|CAQ45806.1| putative flagellar basal-body rod protein [Stenotrophomonas maltophilia K279a] gi|194348482|gb|ACF51605.1| flagellar basal-body rod protein FlgG [Stenotrophomonas maltophilia R551-3] Length = 261 Score = 171 bits (432), Expect = 9e-41, Method: Composition-based stats. Identities = 52/261 (19%), Positives = 89/261 (34%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + I A + R+S V++N++NT+T GF+ + F +++ Sbjct: 1 MNQALWIAKTGLDAQQMRMSVVSNNLANTNTTGFKQDRASFEDLLYQQVRQPGGSSSAQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V + E G TG LD + G +F ++ P TRDG F Sbjct: 61 QLPTGLQLGTGVRVVATAKNFEQGGQQQTGRALDVMVNGRGFFEVQMPDGSSAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 K+ D LV+ SG + + K + + L Sbjct: 121 KINQDSELVTNSGYPVQPGIQIPEGAQSVTIGTDGTISVKMADGAASVEVGALTLTDFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G R + P ++ + TV +G LE SN N + E+ MI + + Sbjct: 181 PAGLQARGENLFLETTASGPAQNGNPGLNGLGTVVQGALEGSNVNVVEELVSMIETQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 I + + + Sbjct: 241 EMNAKAISTTDSMLGYLNNKL 261 >gi|121607559|ref|YP_995366.1| flagellar basal-body rod protein FlgG [Verminephrobacter eiseniae EF01-2] gi|121552199|gb|ABM56348.1| flagellar basal-body rod protein FlgG [Verminephrobacter eiseniae EF01-2] Length = 260 Score = 171 bits (432), Expect = 9e-41, Method: Composition-based stats. Identities = 49/259 (18%), Positives = 94/259 (36%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + I A + +L +A N++N T G++ F +++ + Sbjct: 1 MIDALWIAKTGMSAQQTQLDVIAHNLANVSTTGYKRSNAMFEDLIYQNLRQVGANSTEQN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 Q V + GS + LD A+ G+ +F + P G + TRDG F Sbjct: 61 QLPTGLQLGLGVRTVATSRCFVQGSLQESRNNLDVAINGNGFFQVMLPDGSLGYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFN-VGEKGEISQKGKVIATMGLYSVDM 165 +V G LV+A+G + I V S + + + + + S Sbjct: 121 QVDAQGRLVTANGLPVANGITIAANAISVSISAEGAVSAIMPGSVQPQPLGNLAMASFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + +K+GFLE SN N + E+ MI + + Sbjct: 181 PAGLEPIGQNLFKESAASGQPQQGIPGSNGLGVIKQGFLEASNINIVEELVTMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + I +++ + + + Sbjct: 241 EMNSKAIQTSDQMLAKLSQ 259 >gi|238788317|ref|ZP_04632111.1| Flagellar basal-body rod protein flgG [Yersinia frederiksenii ATCC 33641] gi|238723563|gb|EEQ15209.1| Flagellar basal-body rod protein flgG [Yersinia frederiksenii ATCC 33641] Length = 260 Score = 171 bits (432), Expect = 9e-41, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 91/259 (35%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + + +A+N++N T GF+ + F +++ Sbjct: 1 MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTMRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V G+ T D A++G+ +F ++ P G TRDG F Sbjct: 61 TLPSGLQIGTGVRPVATERLHSQGNLSKTDNSKDIAIKGEGFFQVQMPDGTNAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQI-PQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V +G LV++ G + + V + + + + L + Sbjct: 121 QVDQNGQLVTSGGFQIQPAITIPANALSMTVGRDGIVSVTLQGQTATQQVGQLTLTTFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 + G + D + + +G++E SN N E+ MI + + Sbjct: 181 NSGLESVGENLYQETASSGAPNDSTPGLNGAGLLYQGYVETSNVNVAEELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + + Sbjct: 241 EINSKAVSTSDQMLQKLTQ 259 >gi|327480022|gb|AEA83332.1| flagellar basal body rod protein FlgG [Pseudomonas stutzeri DSM 4166] Length = 261 Score = 171 bits (432), Expect = 9e-41, Method: Composition-based stats. Identities = 48/261 (18%), Positives = 99/261 (37%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + L+T+++N++N T GF+ + +F +++ I+ Sbjct: 1 MLPALWVSKTGLSAQDMNLTTISNNLANVSTTGFKRDRAEFQDLLYQIRRQPGGQSSQDS 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 Q + V GS +T LD A+ G +F + P G + TRDG F Sbjct: 61 ELPSGLQLGTGVRITGTQKIFTTGSLQTTEQPLDMAINGRGFFQVLLPDGTVSYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLD-MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 ++ DG LV+++G + Q E V + + ++I + Sbjct: 121 HLSSDGQLVTSNGYALEPAIVVPPETQTFTVGEDGTVSVTTVGNPQPQIIGNIQTADFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ + + TV + LE+SN + + E+ MI + + Sbjct: 181 PAGLQAMGSNLFLETAASGAPQVSTPGLNGLGTVLQNTLENSNVSVVEELVNMITTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + +I ++ + + + Sbjct: 241 EMNSKVISTADQMLSFVTQQL 261 >gi|329898287|ref|ZP_08272370.1| Flagellar basal-body rod protein flgG [gamma proteobacterium IMCC3088] gi|328920852|gb|EGG28295.1| Flagellar basal-body rod protein flgG [gamma proteobacterium IMCC3088] Length = 261 Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats. Identities = 53/261 (20%), Positives = 94/261 (36%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S + A + R++ +A+N++N +TVGF+ + F +++ Sbjct: 1 MDASLWVAKTGLTAQQMRMTVIANNLANVNTVGFKKDRAVFEDLLYQNVRQPGASADAQT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 + G+ IST LD A+ G +F ++ G TRDG F Sbjct: 61 IAPTGLMLGTGTRIIATEKIHRQGNMISTENALDLAIAGRGFFQIQQADGTFAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-IATMGLYSVDM 165 K+ D G +++ASG+ V + + + GKV + + L Sbjct: 121 KLNDQGQVITASGQLMVPAITVPVNSASLTVGRDGTVDAELEAGAGKVTLGQIQLARFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + P+E + +G LE SN N + EM MI + + Sbjct: 181 EAGLQSIGRNLYRETTASGPVEVGVPGISGIGELTQGSLEASNVNVVEEMVNMIETQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + I + + N+ Sbjct: 241 EVNSKAISAADGMLRFLNNNL 261 >gi|238785495|ref|ZP_04629478.1| Flagellar basal-body rod protein flgG [Yersinia bercovieri ATCC 43970] gi|238713597|gb|EEQ05626.1| Flagellar basal-body rod protein flgG [Yersinia bercovieri ATCC 43970] Length = 260 Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 92/259 (35%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + + +A+N++N T GF+ + F +++ Sbjct: 1 MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTMRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V G+ T D A++G+ +F ++ P G TRDG F Sbjct: 61 TLPSGLQIGTGVRPVATERLHSQGNLAKTDNTKDIAIKGEGFFQVQMPDGTNAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQI-PQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V +G LV+ASG + + V + + + + L + Sbjct: 121 QVDQNGQLVTASGFPVQPAITIPANALSMTVGRDGIVSVTLQGQTATQQVGQLTLTTFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 + G + D G + +G++E SN N E+ MI + + Sbjct: 181 NSGLESMGENLYQETASSGAPNDTTPGLNGGGLLYQGYVETSNVNVAEELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + + Sbjct: 241 EINSKAVSTSDQMLQKLTQ 259 >gi|238758108|ref|ZP_04619288.1| Flagellar basal-body rod protein flgG [Yersinia aldovae ATCC 35236] gi|238703646|gb|EEP96183.1| Flagellar basal-body rod protein flgG [Yersinia aldovae ATCC 35236] Length = 260 Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 90/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + + +A+N++N T GF+ + F +++ Sbjct: 1 MIPSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTMRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V G+ T D A++G+ +F ++ P G TRDG F Sbjct: 61 TLPSGLQIGTGVRPVATERLHSQGNLSKTDNSKDIAIKGEGFFQVQMPDGTNAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V +G LV++ G + + V + + + L + Sbjct: 121 QVDQNGQLVTSGGFQIQPAITIPANALKMTVGRDGIVSVTLPGQTATQQVGQLTLTTFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 + G + + G + +G++E SN N E+ MI + + Sbjct: 181 NSGLESVGENLYQETASSGAPNETTPGLNGGGLLYQGYVETSNVNVAEELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + + Sbjct: 241 EINSKAVSTSDQMLQKLTQ 259 >gi|329901232|ref|ZP_08272757.1| Flagellar basal-body rod protein flgG [Oxalobacteraceae bacterium IMCC9480] gi|327549164|gb|EGF33756.1| Flagellar basal-body rod protein flgG [Oxalobacteraceae bacterium IMCC9480] Length = 260 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 40/259 (15%), Positives = 90/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + ++ +++N++N T GF+ + F +++ Sbjct: 1 MIRSLWISKTGLEAQQTQMDVISNNLANVSTSGFKRSRAVFEDLLYQTLRQPGAQSSQQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+ T + D A++G +F + P TRDG F Sbjct: 61 QLPSGLQLGTGVRPVATERIFTQGNLQQTSNDKDVAIQGQGFFQVLLPDGTTAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 ++ G +V++SG + + + + I + L + Sbjct: 121 QIDSQGQMVTSSGFVIQPAITIPAAAQSLTVGRDGTISITLQGTAAATQIGALQLATFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + T + +G++E SN + + E+ MI + + Sbjct: 181 PAGLESKGENLYVETGASGTANTNTPGTNGAGILSQGYVETSNVSVVEELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + I +++ + + + Sbjct: 241 EINSKAISTSDQMLAKLSQ 259 >gi|204930805|ref|ZP_03221678.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204320264|gb|EDZ05468.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 260 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 88/259 (33%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M +S I A + + +A+N++N T GF+ + F +++ Sbjct: 1 MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V G+ T D A++G +F + P G TRDG F Sbjct: 61 TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVILPDGTSAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V +G LV+A G + + V + + + L + Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + +G++E SN N E+ MI + + + Sbjct: 181 DTGLESIGENLYIETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + ++ + + + Sbjct: 241 EINSKAVSTTDQMLQKLTQ 259 >gi|91794993|ref|YP_564644.1| flagellar basal-body rod FlgG [Shewanella denitrificans OS217] gi|91716995|gb|ABE56921.1| Flagellar basal-body rod FlgG [Shewanella denitrificans OS217] Length = 261 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 47/261 (18%), Positives = 105/261 (40%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 MQ++ + A + +++T+A+N++N +T GF+ +V F+++ ++ Sbjct: 1 MQSALWVSKTGLAAQDTKMTTIANNLANVNTTGFKRDRVAFNDLFYQVQRQPGGQVDELN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + G +T +LD A+EG+ +F +E P + TRDG+F Sbjct: 61 QLPSGLQLGTGTRVAGTQKVFTTGDVHNTSQQLDLAIEGNGFFQVEEPNGDLAYTRDGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 + +G +V++ G V ++ V + + + + L + Sbjct: 121 YRSSEGMMVTSQGLPLVPNIVIPEDSTNITIATDGIVMATIAGDAEPQELGQITLINFTN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G R N+ + + +++G LE SN N + EM +MI + + Sbjct: 181 PAGLEARGNNLYRETAASGVAVEGVAGDQALGGLRQGSLEGSNVNVVEEMVEMISTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 ++ ++ + +++ Sbjct: 241 EMNAKVVSASDDMLKFLNQSV 261 >gi|51596013|ref|YP_070204.1| flagellar basal body rod protein FlgG [Yersinia pseudotuberculosis IP 32953] gi|153947499|ref|YP_001401288.1| flagellar basal body rod protein FlgG [Yersinia pseudotuberculosis IP 31758] gi|170024645|ref|YP_001721150.1| flagellar basal body rod protein FlgG [Yersinia pseudotuberculosis YPIII] gi|51589295|emb|CAH20916.1| flagellar basal-body rod protein FlgG (distal rod protein) [Yersinia pseudotuberculosis IP 32953] gi|152958994|gb|ABS46455.1| flagellar basal-body rod protein FlgG [Yersinia pseudotuberculosis IP 31758] gi|169751179|gb|ACA68697.1| flagellar basal-body rod protein FlgG [Yersinia pseudotuberculosis YPIII] Length = 260 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 91/259 (35%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + + +A+N++N T GF+ + F +++ Sbjct: 1 MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTLRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V G+ T D A++G+ +F ++ P G TRDG F Sbjct: 61 TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDIAIKGEGFFQVQMPDGTNAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQI-PQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V +G LV+A G + + V + + + + L + Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANALSMTVGRDGIVSVTLQGQTATQQVGQLTLTTFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 + G + + G + +G++E SN N E+ MI + + Sbjct: 181 NSGLESVGENLYQETASSGAPNETTPGLNGGGLLYQGYVETSNVNVAEELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + + Sbjct: 241 EINSKAVSTSDQMLQKLAQ 259 >gi|126668560|ref|ZP_01739514.1| Flagellar basal body rod protein [Marinobacter sp. ELB17] gi|126626965|gb|EAZ97608.1| Flagellar basal body rod protein [Marinobacter sp. ELB17] Length = 262 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 44/262 (16%), Positives = 93/262 (35%), Gaps = 20/262 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + +ST+++N++N +T GF+ + F +++ +K Sbjct: 1 MNPALWVSKTGLSAQDTNMSTISNNLANVNTTGFKRDRAVFQDLLYQVKRQPGGLNTQNT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+ T LD A+ G + ++ P TRDG+F Sbjct: 61 ELPSGLQLGTGVRVVGTVKQFTQGNLQITEQPLDMAVNGRGFLQVQLPDGQTAYTRDGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 ++ DG +V+ SG ++ V + + + L Sbjct: 121 QLNSDGDVVNPSGYALEPNINIPENATNVTIGRDGTVTAVTDDQAAPINLGQITLVDFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 QG N+ + ++++G +E SN + E+ MI + + Sbjct: 181 PQGLQAIGNNLFKQTNASGDPTEGEPGLAGLGSLEQGSIESSNVEVVEELVNMITTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNIA 242 + ++ ++ + NI Sbjct: 241 EMNSKVVSTVDQMLQFITNNIG 262 >gi|322421662|ref|YP_004200885.1| flagellar basal-body rod protein FlgG [Geobacter sp. M18] gi|320128049|gb|ADW15609.1| flagellar basal-body rod protein FlgG [Geobacter sp. M18] Length = 262 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 46/258 (17%), Positives = 92/258 (35%), Gaps = 20/258 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + + VA+N++N+ T GF+ + F +++ + Sbjct: 1 MIRALWTAASGMQAQQLNIDVVANNLANSSTTGFKKSRADFQDLMYQTEKTTGAPATNAT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106 Q V G G+ + TG ELD A++GD + ++ TR G Sbjct: 61 TVPTGIQVGLGVRPGAVAKVFTTGTIVHTGNELDLAIQGDGFLQVQQSDGSTAYTRAGSL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 K G +V++ G+ + ++ V + + T+ L S Sbjct: 121 KKDGQGRVVTSDGQPVIPEVLIPSNATSVSIGTDGTVSVQQAGQTAATTVGTIQLASFTN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + P ++++G++E SN + M EM MI + + Sbjct: 181 PSGLNAIGKNLFLPTDSSGAATTGTAGQNGLGSLEQGYIEQSNVSVMEEMVSMIVSQRAY 240 Query: 221 NSITTLIDENEKSMLEAI 238 + I ++ + +A Sbjct: 241 EINSKAIQASDDMLQQAA 258 >gi|295696121|ref|YP_003589359.1| fagellar hook-basal body protein [Bacillus tusciae DSM 2912] gi|295411723|gb|ADG06215.1| fagellar hook-basal body protein [Bacillus tusciae DSM 2912] Length = 265 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 50/263 (19%), Positives = 103/263 (39%), Gaps = 25/263 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S ++ + ++ + +N++N +TVGF+ +V F +++ Sbjct: 1 MMRSLYSAVSGMRGFQTKMDVIGNNIANVNTVGFKASRVMFHDLISQTLSGATAPGDTTG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF--ALESPRGIILTRDGRF 106 ++ Q V G+ + TG D A++G+ +F L TR G F Sbjct: 61 GSNPQQVGLGVGLASIDTPMTPGAPMMTGVPTDLAIDGNGFFVVQLSDGATQAYTRAGNF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ-----KGKVIATMGLY 161 + + +LV++ G + LD PIQ+P + ++ + G ++ + A +GL Sbjct: 121 HIDSNRNLVTSEGLFV-LDTGGAPIQLPDNTKSVSIDKNGNVNCLLDDGTTQTAAQIGLA 179 Query: 162 SVDMSQGFVRRENSGISP-----NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + +G + N+ ++ G LE SN + E +MI Sbjct: 180 NFANPEGLQKIGNNLFVETTNSGTADVQAPNQGVFGSITSGALEMSNVDLTNEFTEMIIA 239 Query: 217 TQKFNSITTLIDENEKSMLEAIR 239 + F + I +++ + E + Sbjct: 240 QRAFQANARTITSDDQMLQEVVN 262 >gi|146281773|ref|YP_001171926.1| flagellar basal body rod protein FlgG [Pseudomonas stutzeri A1501] gi|145569978|gb|ABP79084.1| flagellar basal-body rod protein FlgG [Pseudomonas stutzeri A1501] Length = 261 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 47/261 (18%), Positives = 98/261 (37%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + L+T+++N++N T GF+ + +F +++ I+ Sbjct: 1 MLPALWVSKTGLSAQDMNLTTISNNLANVSTTGFKRDRAEFQDLLYQIRRQPGGQSSQDS 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 Q + V GS +T LD A+ G +F + P G + TRDG F Sbjct: 61 ELPSGLQLGTGVRVTGTQKIFTTGSLQTTEQPLDMAINGRGFFQVLLPDGTVSYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASV-PIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 + DG +V+++G + Q E V + + ++I + Sbjct: 121 HLDSDGQVVTSNGYALEPAIVVPAETQTFTVGEDGTVSVTTLGNAQPQIIGNIQTADFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ + + TV + LE+SN + + E+ MI + + Sbjct: 181 PAGLQAMGSNLFLETAASGAPQVSTPGLNGLGTVLQNTLENSNVSVVEELVNMITTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + +I ++ + + + Sbjct: 241 EMNSKVISTADQMLSFVTQQL 261 >gi|317492426|ref|ZP_07950855.1| flagellar basal-body rod protein FlgG [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919765|gb|EFV41095.1| flagellar basal-body rod protein FlgG [Enterobacteriaceae bacterium 9_2_54FAA] Length = 260 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 88/259 (33%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + + +A+N++N T GF+ + F +++ Sbjct: 1 MIRSLYIAKTGLEAQQTNMDVIANNLANVSTNGFKRQRAVFEDLMYQTLRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V G+ T D A++G +F ++ P G TRDG F Sbjct: 61 TLPSGLQIGTGVRPVATERLHSQGNLSQTDNSRDVAIKGQGFFQVQQPDGTLAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V +G LV++SG V + V + + + L + Sbjct: 121 QVDQNGQLVTSSGFQVVPAITIPANATKLTIGRDGIVSVNQQGQTATTQVGQLTLTTFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + +G++E SN N E+ MI + + Sbjct: 181 DAGLESVGENLYQETESSGAPTESTPGLNGAGMLYQGYVETSNVNVAEELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + Sbjct: 241 EINSKAVTTSDQMLQRLTQ 259 >gi|270262399|ref|ZP_06190670.1| flagellar basal-body rod protein FlgG [Serratia odorifera 4Rx13] gi|270043083|gb|EFA16176.1| flagellar basal-body rod protein FlgG [Serratia odorifera 4Rx13] Length = 260 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 42/259 (16%), Positives = 88/259 (33%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + + +A+N++N T GF+ + F +++ Sbjct: 1 MIPSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTMRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+ T D A++G +F + P TRDG F Sbjct: 61 TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGSQAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 ++ +G LV+ASG + + V + + + + L + Sbjct: 121 QIDQNGQLVTASGFQVQPAITIPANALSITVGRDGIVSVTQQGQTAAQQVGQLTLTTFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + +G++E SN N E+ MI + + Sbjct: 181 DSGLESVGENLYQETESSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + + Sbjct: 241 EINSKAVSTSDQMLQKLTQ 259 >gi|238751764|ref|ZP_04613252.1| Flagellar basal-body rod protein flgG [Yersinia rohdei ATCC 43380] gi|238710035|gb|EEQ02265.1| Flagellar basal-body rod protein flgG [Yersinia rohdei ATCC 43380] Length = 260 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 91/259 (35%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + + +A+N++N T GF+ + F +++ Sbjct: 1 MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTMRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V G+ T D A++G+ +F ++ P G TRDG F Sbjct: 61 TLPSGLQIGTGVRPVATERLHSQGNLSKTDNSKDIAIKGEGFFQVQMPDGTNAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQI-PQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V +G LV++ G + + V + + + + L + Sbjct: 121 QVDQNGQLVTSGGFQVQPAITIPANALSMTVGRDGIVSVTLQGQTATQQVGQLTLTTFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 + G + + G + +G++E SN N E+ MI + + Sbjct: 181 NSGLESMGENLYQETASSGAPNETTPGLNGGGLLYQGYVETSNVNVAEELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + + Sbjct: 241 EINSKAVSTSDQMLQKLTQ 259 >gi|307823533|ref|ZP_07653762.1| flagellar basal-body rod protein FlgG [Methylobacter tundripaludum SV96] gi|307735518|gb|EFO06366.1| flagellar basal-body rod protein FlgG [Methylobacter tundripaludum SV96] Length = 262 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 40/260 (15%), Positives = 87/260 (33%), Gaps = 20/260 (7%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + + + + A + R++ +++N++N +T GF+ + F +++ + Sbjct: 3 ERALWVAKSGLDAQQTRMAVISNNLANVNTTGFKRGRAVFEDLMYQNIRQVGAQSTQNTQ 62 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFK 107 Q + V + G+ T LD A+ G + + P TRDG K Sbjct: 63 LPTGLQLGTGVRTVATEKLHTQGNVQPTENALDVAINGRGFLQILMPNGDTNYTRDGSLK 122 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDMS 166 + G LV++ G + + V V+ + + Sbjct: 123 LDATGQLVTSGGLTLNPAITVPQDALSVTIGTDGTVSALQPGVAAPTVLGQIQTANFINP 182 Query: 167 QGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221 G + + T+ +G LE SN N + E+ MI + + Sbjct: 183 TGLEAVGENLYRESAASGAPIVGTPGQAEYGTLTQGSLETSNVNVVEELVNMIETQRAYE 242 Query: 222 SITTLIDENEKSMLEAIRNI 241 + I ++ + + + Sbjct: 243 MNSKAISTTDQMLSFVTQQL 262 >gi|197120123|ref|YP_002140550.1| flagellar basal body rod protein FlgG [Geobacter bemidjiensis Bem] gi|197089483|gb|ACH40754.1| flagellar basal body rod protein FlgG [Geobacter bemidjiensis Bem] Length = 262 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 51/258 (19%), Positives = 95/258 (36%), Gaps = 20/258 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + + VA+N++N T GF+ + F +++ + Sbjct: 1 MIRALWTAASGMQAQQLNIDVVANNLANAATTGFKKSRADFQDLMYQTEKTTGAPATNAT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106 Q V G G+ I+TG ELD A++GD + ++ TR G F Sbjct: 61 TIPTGIQVGLGVRPGAVTKVFTTGNIIATGNELDLAIQGDGFLQVQQSDGSTAYTRAGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 K G +V++ G+ + ++ V + + T+ L S Sbjct: 121 KRDGQGRVVTSDGQPVIPEVLIPSNATRVTVGTDGTVSVQQAGQTAATTVGTLQLASFSN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + P T+++GFLE+SN + M EM MI + + Sbjct: 181 PAGLNAIGKNLFLPTDSSGAATTGTAGQNGLGTIEQGFLENSNVSIMEEMVSMIVGQRAY 240 Query: 221 NSITTLIDENEKSMLEAI 238 + I +++ + +A Sbjct: 241 EINSKAIQASDEMLQQAA 258 >gi|186895116|ref|YP_001872228.1| flagellar basal body rod protein FlgG [Yersinia pseudotuberculosis PB1/+] gi|186698142|gb|ACC88771.1| flagellar basal-body rod protein FlgG [Yersinia pseudotuberculosis PB1/+] Length = 260 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 90/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + + +A+N++N T GF+ + F +++ Sbjct: 1 MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTLRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V G+ T D A++G+ +F ++ P G TRDG F Sbjct: 61 TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDIAIKGEGFFQVQMPDGTNAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQI-PQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V +G LV+A G + + V + + + + L Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANALSMTVGRDGIVSVTLQGQTATQQVGQLTLTIFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 + G + + G + +G++E SN N E+ MI + + Sbjct: 181 NSGLESVGENLYQETASSGAPNETTPGLNGGGLLYQGYVETSNVNVAEELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + + Sbjct: 241 EINSKAVSTSDQMLQKLAQ 259 >gi|254458078|ref|ZP_05071505.1| flagellar basal-body rod protein FlgG [Campylobacterales bacterium GD 1] gi|207085471|gb|EDZ62756.1| flagellar basal-body rod protein FlgG [Campylobacterales bacterium GD 1] Length = 262 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 48/259 (18%), Positives = 99/259 (38%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ------ 54 M S L ++ ++ T A+N++N +T+GF+ + +FS+++ + + Sbjct: 1 MMQSLYTASTGMLGMQTQIDTTANNIANVNTIGFKKSRAEFSDLMYKVMSYAGTATSDVT 60 Query: 55 -------KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 V GS T +LD A+ G +F LE P + +R+G F Sbjct: 61 KSPTGIEVGLGVRPTAINKIFSEGSLKQTDNQLDVAITGRGFFKLELPDGTEVYSRNGAF 120 Query: 107 KVTDDGSLVSASGKY-PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 KV D+GS+V++ G + V + I + L + Sbjct: 121 KVDDNGSMVNSDGYKLVPEIVIPPDATDISIGTDGTVTVVQPGQTQATQIGQITLTNFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G R ++ + + +++GF+E SN + E+ +I + + Sbjct: 181 PAGLHSRGDNLYLETDSSGQPVEGTPGVDGLGVLRQGFVELSNVELVVELTDLITGQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 +S + +I +++ + Sbjct: 241 DSNSKVITTSDEMLQTTNN 259 >gi|256830177|ref|YP_003158905.1| flagellar basal-body rod protein FlgF [Desulfomicrobium baculatum DSM 4028] gi|256579353|gb|ACU90489.1| flagellar basal-body rod protein FlgF [Desulfomicrobium baculatum DSM 4028] Length = 258 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 60/259 (23%), Positives = 108/259 (41%), Gaps = 19/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 MQ S + L + RL ++A+N++N +T GF++ K+ F + +D+ + + Sbjct: 1 MQDSSYSAVFGALTQQHRLDSIANNLANVNTTGFKSEKLAFRDTFRRYAHDMVDPNTTLT 60 Query: 61 SGKEYLS---------------KEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGR 105 + G STG LD A+ GD +F +++P G +TR G Sbjct: 61 DKVPWPQANLLAQPRISEAVIDMSQGPMKSTGNPLDLAIAGDGFFRVQTPEGEFMTRQGV 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 + ++ +G +V A G + + V G S G++I T+ L V+ Sbjct: 121 YHLSAEGFVVDAHGNQLLGAGG---PLQVPEGGAVLVDADGGFSVNGELIDTIELVRVED 177 Query: 166 SQGFVRRENSG-ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224 + + NS TV++GFLE +N N + EM MI + F + Sbjct: 178 PRALEKVGNSLLRIRPGADAQAIPAEDSTVEQGFLEAANVNVVSEMVNMIEAMRAFEAYQ 237 Query: 225 TLIDENEKSMLEAIRNIAS 243 +I + + +AI + + Sbjct: 238 KMISGSFEQDKKAIAEVGA 256 >gi|83589631|ref|YP_429640.1| hypothetical protein Moth_0779 [Moorella thermoacetica ATCC 39073] gi|83572545|gb|ABC19097.1| conserved hypothetical protein [Moorella thermoacetica ATCC 39073] Length = 275 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 48/272 (17%), Positives = 85/272 (31%), Gaps = 33/272 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-------- 52 M S G++ + R+ + DN++N +TVGF+ V F +V Sbjct: 1 MMRSLYSGVSGLRTHQTRMDVIGDNIANVNTVGFKRSAVTFKDVFYQTLRGGSAGDSGGT 60 Query: 53 -------DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGR 105 Q V G + G+ STG D ++GD +F + TR G Sbjct: 61 GMGGTNPQQIGLGVTLGSIDVVHTQGAAASTGNGTDLMIQGDGFFRVSDGTNTYYTRAGA 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVG----------EKGEISQKGKVI 155 F ++G LV+ G + + D + + Sbjct: 121 FHFDNEGFLVTTDGLKVLGTDDNPIQIADMNDPTTMPQSYSIDKMGVVHYVDSTGAALQA 180 Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPP--------TPLEDLSGVTVKRGFLEDSNANSM 207 T+ + G + + L+ T+ LE SN + Sbjct: 181 GTISIAKFSNPSGLEKIGQNLYRATTSSGDPGSELTPGQGSLANTTIIPSALEMSNVDLA 240 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E MI + F + I +++ + E + Sbjct: 241 QEFTDMIITERGFQANARTITTSDQMLQELVN 272 >gi|226939372|ref|YP_002794445.1| flgG [Laribacter hongkongensis HLHK9] gi|226714298|gb|ACO73436.1| flgG [Laribacter hongkongensis HLHK9] Length = 260 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 48/259 (18%), Positives = 88/259 (33%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S I + + RL + +N++N +T GF+ + F +++ + Sbjct: 1 MLRSLYISKTGMDSSQFRLDVITNNLANVNTTGFKKGRAVFEDLMYQTIRQPGAQSSQNT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 + A G+ T LD A+ G +F ++ P G I TRDG F Sbjct: 61 MLPTGLLVGTGAAPVAVDRQFSPGNLQQTNNALDMAINGRGFFTIQMPDGTIGYTRDGTF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165 K+ D G LV++ G + + + + I M L Sbjct: 121 KLDDQGQLVTSQGFLVDPQITVPQGAKSISVSKDGIVSVVLPGQTQPQQIGQMQLADFIN 180 Query: 166 SQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 QG + + +++ FLE SN N E+ +MI + + Sbjct: 181 PQGLEPIGGNLYLETAASGAPTVANPTNDGTGAIQQTFLEASNVNVTEELVEMIQAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + I ++ + + Sbjct: 241 ELNSRGIKTSDDMLARLSQ 259 >gi|294339841|emb|CAZ88204.1| Flagellar basal-body rod protein flgG (Distal rod protein) [Thiomonas sp. 3As] Length = 261 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 47/261 (18%), Positives = 91/261 (34%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S + A + R+ +A+N++N +T GF+ + F +++ Sbjct: 1 MIRSLYVAKTGLEAEQTRMDVIANNLANVNTSGFKGSRAVFQDLLYQNLTQPGAQSSQST 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+ TG LD A+ G +F + P I TRDG F Sbjct: 61 QYPSGLQLGTGVRPVSTERLMTQGNLTQTGNSLDVAINGQGFFQVLEPNGTIAYTRDGTF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165 ++ + G LV+A+G + + + + L S Sbjct: 121 QLNNQGQLVTANGYLVQPTVTIPASAQSVTIGNDGTVSVTLPGQAAPQQVGALQLASFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ +V++G+LE SN N + E+ MI + + Sbjct: 181 PTGLQSIGDNLYLQTGSSGAPNTGQPTLNGLGSVRQGYLESSNVNVVAELVDMISTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + + +++ + N+ Sbjct: 241 EVNSKAVTASDQMLQYVNNNL 261 >gi|15596279|ref|NP_249773.1| flagellar basal body rod protein FlgG [Pseudomonas aeruginosa PAO1] gi|107100527|ref|ZP_01364445.1| hypothetical protein PaerPA_01001552 [Pseudomonas aeruginosa PACS2] gi|116049011|ref|YP_792187.1| flagellar basal body rod protein FlgG [Pseudomonas aeruginosa UCBPP-PA14] gi|152984786|ref|YP_001349648.1| flagellar basal body rod protein FlgG [Pseudomonas aeruginosa PA7] gi|218892954|ref|YP_002441823.1| flagellar basal body rod protein FlgG [Pseudomonas aeruginosa LESB58] gi|254234218|ref|ZP_04927541.1| flagellar basal-body rod protein FlgG [Pseudomonas aeruginosa C3719] gi|254239440|ref|ZP_04932762.1| flagellar basal-body rod protein FlgG [Pseudomonas aeruginosa 2192] gi|296390554|ref|ZP_06880029.1| flagellar basal body rod protein FlgG [Pseudomonas aeruginosa PAb1] gi|313106037|ref|ZP_07792296.1| flagellar basal-body rod protein FlgG [Pseudomonas aeruginosa 39016] gi|9946998|gb|AAG04471.1|AE004539_13 flagellar basal-body rod protein FlgG [Pseudomonas aeruginosa PAO1] gi|115584232|gb|ABJ10247.1| flagellar basal-body rod protein FlgG [Pseudomonas aeruginosa UCBPP-PA14] gi|126166149|gb|EAZ51660.1| flagellar basal-body rod protein FlgG [Pseudomonas aeruginosa C3719] gi|126192818|gb|EAZ56881.1| flagellar basal-body rod protein FlgG [Pseudomonas aeruginosa 2192] gi|150959944|gb|ABR81969.1| flagellar basal-body rod protein FlgG [Pseudomonas aeruginosa PA7] gi|218773182|emb|CAW28994.1| flagellar basal-body rod protein FlgG [Pseudomonas aeruginosa LESB58] gi|310878798|gb|EFQ37392.1| flagellar basal-body rod protein FlgG [Pseudomonas aeruginosa 39016] Length = 261 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 50/261 (19%), Positives = 100/261 (38%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M ++ + A + L+T+++N++N T GF+ + +F +++ I+ Sbjct: 1 MLSALWVSKTGLSAQDMNLTTISNNLANVSTTGFKRDRAEFQDLLYQIRRQPGGQSTQDS 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 Q + V GS +T LD A+ G +F + P G + TRDG F Sbjct: 61 ELPSGLQLGTGVRVVGTQKIFTPGSLQTTEQPLDMAVNGRGFFQVLLPDGTVSYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 + DG +V+++G + Q + V + + +VI + Sbjct: 121 HLNSDGQIVTSNGFALEPAIVVPNETQTFTVGQDGTVSVTTTGNAQPQVIGNIQTADFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G N+ + + TV + LE+SN N + E+ MI + + Sbjct: 181 PAGLQAIGNNLFLETGSSGAPQVGTPGLNGLGTVAQNTLENSNVNVVEELVNMITTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + +I ++ + +N+ Sbjct: 241 EMNSKVISTADQMLSFVTQNL 261 >gi|163856437|ref|YP_001630735.1| flagellar basal body rod protein FlgG [Bordetella petrii DSM 12804] gi|163260165|emb|CAP42467.1| flagellar basal-body rod protein FlgG [Bordetella petrii] Length = 261 Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 42/260 (16%), Positives = 92/260 (35%), Gaps = 21/260 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I + + +++N++N T GF+ + F +++ Sbjct: 1 MMRSLWIAKTGLEGQQTSMDVISNNLANVQTNGFKRGRAIFQDLMYQTLRQPGAQVGDAN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V G+ +TG+ELD A++G + ++ P G TRDG Sbjct: 61 QLPTGLQLGTGVRVASTERVFTQGNLNNTGSELDIAIDGKGFLQVDLPDGTQAYTRDGTL 120 Query: 107 KVTDDGSLVSASGK--YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 +V +G L +A G P +++ + + + + + I + L + Sbjct: 121 QVDQNGQLTTAGGYVIQPPINVPDNALSLTIGKDGTVSVTQPGAAGLNVQIGQLQLATFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + P ++ + ++E SN N E+ MI + Sbjct: 181 NPPGLQSVGENLYLETDSSGPANILQPGIDGAGSILQQYVETSNVNVAEELVNMITTQRA 240 Query: 220 FNSITTLIDENEKSMLEAIR 239 + + + +++ + + Sbjct: 241 YEMNSKAVKTSDEMLARLTQ 260 >gi|157371205|ref|YP_001479194.1| flagellar basal body rod protein FlgG [Serratia proteamaculans 568] gi|157322969|gb|ABV42066.1| flagellar basal-body rod protein FlgG [Serratia proteamaculans 568] Length = 260 Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 88/259 (33%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + + +A+N++N T GF+ + F +++ Sbjct: 1 MIPSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTMRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V G+ T D A++G +F + P G TRDG F Sbjct: 61 TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDIAIKGQGFFQVMMPDGTLAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 + +G LV+ASG + + V + + + + L + Sbjct: 121 QRDQNGQLVTASGFQVQPAIIIPANALSITVGRDGIVSVTQQGQTAAQQVGQLTLTTFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + +G++E SN N E+ MI + + Sbjct: 181 DSGLESMGENLYQETESSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + + Sbjct: 241 EINSKAVSTSDQMLQKLTQ 259 >gi|227112523|ref|ZP_03826179.1| flagellar basal body rod protein FlgG [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 260 Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 89/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + + +++N++N T GF+ + F +++ Sbjct: 1 MIRSLWIAKTGLNAQQTNMDVISNNLANVSTNGFKRQRAVFEDLMYQTVRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+F TG D A++G +F ++ P TRDG F Sbjct: 61 MLPSGLQLGTGVRPVSTERIHTQGTFSETGNSKDVAIKGQGFFQVQLPDGTTAYTRDGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIP-QKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 ++ +G LV++SG + V K + I + L + Sbjct: 121 QLDGNGQLVTSSGYQVQPAITVPANATELNIGRDGIVSVKVQGQAATNQIGQLTLTTFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + + ++E SN N E+ MI + + Sbjct: 181 DSGLESIGENLYLETASSGAPNETNPGLNGAGLLYQKYVETSNVNVAEELVSMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + I +++ + + + Sbjct: 241 EINSKAISSSDQMLQKLTQ 259 >gi|225158946|ref|ZP_03725258.1| flagellar basal-body rod protein FlgG [Opitutaceae bacterium TAV2] gi|224802441|gb|EEG20701.1| flagellar basal-body rod protein FlgG [Opitutaceae bacterium TAV2] Length = 260 Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 48/258 (18%), Positives = 95/258 (36%), Gaps = 20/258 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S A + L+T+A+N++N +T GF+ K++F +++ + Sbjct: 1 MNLSLYSAATGMEAQQLNLNTIANNLANVNTAGFKRSKIEFHDMLYQSPRNAGAETGNGN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + + G ++ +LD A++G+ +F ++ P TRDG F Sbjct: 61 LLPTGVEIGNGSRISSTAKIFTQGQLTASSEKLDIAIQGEGFFEIQRPDGTTAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 K +G +V+A G PVL I + G+ + G + L Sbjct: 121 KQDPNGQIVTADG-LPVLSGFQAVPNGTTDITISDTGDVTYTNAAGNETFRLTLTRFANP 179 Query: 167 QGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221 G + E T ++ ++E SN N + EM +I + + Sbjct: 180 AGLRSLGGNLYEETPASGTPETGQPGEQGFGTTQQYYIESSNVNIVEEMVNLIVAQRAYE 239 Query: 222 SITTLIDENEKSMLEAIR 239 + I +++ + + Sbjct: 240 VSSKAIQTSDEMLQNVTQ 257 >gi|149375032|ref|ZP_01892805.1| Flagellar basal body rod protein [Marinobacter algicola DG893] gi|149360921|gb|EDM49372.1| Flagellar basal body rod protein [Marinobacter algicola DG893] Length = 262 Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 47/262 (17%), Positives = 95/262 (36%), Gaps = 20/262 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + +ST+++N++N +T GF+ + F +++ I Sbjct: 1 MHPALWVSKTGLSAQDTNMSTISNNLANVNTTGFKRDRAVFQDLLYQIDRQPGGLNTQNS 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+ T LD A+ G + + P I TRDG+F Sbjct: 61 ELPSGLQLGTGVRIVGTAKQFSQGNLEVTEQPLDMAVNGRGFMQILLPDGQIAYTRDGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 ++ +G +V+ G ++ + V + + + L Sbjct: 121 QLNSNGDIVNPDGYTLEPNINVPENATNITIGKDGTVSAVTDDQAAPVNLGEITLVDFIN 180 Query: 166 SQGFVRRENSGI-SPNIPPTPLE----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 QG N+ + N P E T+++G +E SN + E+ MI + + Sbjct: 181 PQGLQAIGNNLFKATNASGDPAEGEPGIGGLGTLEQGMVEASNVEVVEELVNMITTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNIA 242 + ++ ++ + NI Sbjct: 241 EMNSKVVSATDQMLQFITNNIG 262 >gi|138894748|ref|YP_001125201.1| flagellar basal body rod protein FlgG [Geobacillus thermodenitrificans NG80-2] gi|134266261|gb|ABO66456.1| Flagellar hook protein [Geobacillus thermodenitrificans NG80-2] Length = 264 Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 53/263 (20%), Positives = 103/263 (39%), Gaps = 26/263 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G+ A + +L + +N++N +T GF+ + F +++ + Sbjct: 1 MLRSMYSGIGAMRNFQTKLDVIGNNIANVNTYGFKKGRTIFQDLMSQTISGASGPSAASG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRF 106 Q GS +TG LD A+ GD +F + + TR G F Sbjct: 61 GTNPRQVGLGSQLAAIDTIHTQGSLQTTGRVLDLAISGDGFFIVGDANGNNQMYTRAGNF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG-----KVIATMGLY 161 + +G +V+A+G Y + D P+QI + ++G G ++ +++ T+ L Sbjct: 121 YLDSEGYIVNANGLYLLGD--GGPLQIDPNAKSLSIGADGNVTIVDDTGNLQLVGTIQLA 178 Query: 162 SVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHL 216 G + N+ + + + G LE SN + E +MI Sbjct: 179 KFANPDGLEKEGNNLFRETVNSGDPQIGVPGANGTGKLVSGALEMSNVDLAEEFTEMIVA 238 Query: 217 TQKFNSITTLIDENEKSMLEAIR 239 + F + T +I +++ + E + Sbjct: 239 QRGFQANTRIITTSDEILQELVN 261 >gi|119477951|ref|ZP_01618051.1| Flagellar basal body rod protein [marine gamma proteobacterium HTCC2143] gi|119448864|gb|EAW30106.1| Flagellar basal body rod protein [marine gamma proteobacterium HTCC2143] Length = 261 Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 46/261 (17%), Positives = 97/261 (37%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + I A + RL+T+++N++N TVG++ V F +++ I+ Sbjct: 1 MNQALWISKTGLSAQDTRLATISNNLANAATVGYKRDSVVFEDLLYQIRRQPGAQSSQNT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V GS T LD A+ G +F + P G +R+G+F Sbjct: 61 QLPSGLQVGTGVRVIGTQKEFSDGSVQITEKPLDLAIVGRGFFEILMPDGTSAYSRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 ++ DG +V+A G + V + + + + + + Sbjct: 121 QINADGEIVNARGLLLQPSITVPDDAQTVSISSDGIVEAQIAGQAAAQTLGNITVTNFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ + +++G LE+SN + + E+ MI + + Sbjct: 181 PTGLQSIGSNLFIETAASGTPQQGEPGIDGLGRLEQGALENSNVDVVEELVSMITTQRTY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + +I ++ + +N+ Sbjct: 241 EMNSKVISTADQMLQYISQNL 261 >gi|311280015|ref|YP_003942246.1| flagellar basal-body rod protein FlgG [Enterobacter cloacae SCF1] gi|308749210|gb|ADO48962.1| flagellar basal-body rod protein FlgG [Enterobacter cloacae SCF1] Length = 260 Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 88/259 (33%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M +S I A + + +A+N++N T GF+ + F +++ Sbjct: 1 MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTVRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V G+ T D A++G +F + P G TRDG F Sbjct: 61 TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQILLPDGTSAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V +G LV+A G + + V + + + L + Sbjct: 121 QVDQNGQLVTAGGYQVQPAITIPANTLSITIGRDGVVSVTQQGQTNPVQVGQLNLTTFMN 180 Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + D + +G++E SN N E+ MI + + + Sbjct: 181 DAGLESIGENLYTETQASGAPNDTTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + ++ + + + Sbjct: 241 EINSKAVTTTDQMLQKLTQ 259 >gi|196247630|ref|ZP_03146332.1| protein of unknown function DUF1078 domain protein [Geobacillus sp. G11MC16] gi|196212414|gb|EDY07171.1| protein of unknown function DUF1078 domain protein [Geobacillus sp. G11MC16] Length = 264 Score = 170 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 48/261 (18%), Positives = 94/261 (36%), Gaps = 22/261 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G+ A + +L + +N++N +T GF+ + F +++ + Sbjct: 1 MLRSMYSGIGAMRNFQTKLDVIGNNIANVNTYGFKKGRTIFQDLMSQTISGASGPSAASG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRF 106 Q GS +TG LD A+ GD +F + + TR G F Sbjct: 61 GTNPRQVGLGSQLAAIDTIHTQGSLQTTGRVLDLAISGDGFFIVGDANGNNQMYTRAGNF 120 Query: 107 KVTDDGSLVSASGKYPVLDM---ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 + +G +V+A+G Y + D + + +++ T+ L Sbjct: 121 YLDSEGYIVNANGLYLLGDGGPLKIDSNAKSLSIGADGNVTIVDDTGNLQLVGTIQLAKF 180 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 G + N+ + + + G LE SN + E +MI + Sbjct: 181 ANPDGLEKEGNNLFRETVNSGDPQIGVPGANGTGKLVSGALEMSNVDLAEEFTEMIVAQR 240 Query: 219 KFNSITTLIDENEKSMLEAIR 239 F + T +I +++ + E + Sbjct: 241 GFQANTRIITTSDEILQELVN 261 >gi|225620642|ref|YP_002721900.1| flagellar basal body rod protein [Brachyspira hyodysenteriae WA1] gi|225215462|gb|ACN84196.1| flagellar basal body rod protein [Brachyspira hyodysenteriae WA1] Length = 282 Score = 170 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 59/280 (21%), Positives = 103/280 (36%), Gaps = 38/280 (13%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS---EVVGAIKND------ 51 M G + +A + RL VA+N++N D GF+ V F E++ A D Sbjct: 1 MVRGVYTGASGMMAEQARLDVVANNLANVDKPGFKRDTVSFKAFPEMMAARTEDDGVVIF 60 Query: 52 ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101 + + + V + + E GS TG +LD AL +FA+E+P G T Sbjct: 61 PLGSTDVRPYVGRMGTGVEVNEVFTEWEQGSLRETGNQLDIALGDKGFFAIETPNGERYT 120 Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF---------------NVGEKG 146 R+G F + D LV+ G + + + I+ + V Sbjct: 121 RNGSFLIDKDHYLVTKHGYKVMGENGYIQIKTNNFNIDEEGRVSINRRYQDGNTFVQFND 180 Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV----TVKRGFLEDS 202 + +++ T+ + D + + S P V FLE S Sbjct: 181 NEWEDEEILDTLKIVRFDNERYLKKEGESFWVDTDISGPAFIAEKGVNRPKVLSRFLEMS 240 Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 N N + EM +MI + + + + I ++ + I + Sbjct: 241 NVNPINEMVRMIEVQRAYELNSKTISTHDTLVGRVINEVG 280 >gi|253702432|ref|YP_003023621.1| flagellar basal body rod protein FlgG [Geobacter sp. M21] gi|251777282|gb|ACT19863.1| flagellar basal-body rod protein FlgG [Geobacter sp. M21] Length = 262 Score = 170 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 50/258 (19%), Positives = 93/258 (36%), Gaps = 20/258 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + + VA N++N T GF+ + F +++ + Sbjct: 1 MIRALWTAASGMQAQQLNIDVVAHNLANAATTGFKKSRADFQDLMYQTEKTTGAPATNAT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106 Q V G G+ I+TG ELD A++GD + ++ TR G Sbjct: 61 TIPTGIQVGLGVRPGAVTKVFTTGNIIATGNELDLAIQGDGFLQVQQSDGSTAYTRAGAL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 K G +V++ G+ + ++ V + + T+ L S Sbjct: 121 KRDGQGRVVTSDGQPVIPEVLIPSNATRVTVGTDGTVSVQQAGQTAATTVGTLQLASFSN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + P T+++GFLE+SN + M EM MI + + Sbjct: 181 PAGLNAIGKNLFLPTDSSGAATTGTAGQNGLGTIEQGFLENSNVSIMEEMVSMIVGQRAY 240 Query: 221 NSITTLIDENEKSMLEAI 238 + I +++ + +A Sbjct: 241 EINSKAIQASDEMLQQAA 258 >gi|167628969|ref|YP_001679468.1| flagellar basal-body rod protein flgg, putative [Heliobacterium modesticaldum Ice1] gi|167591709|gb|ABZ83457.1| flagellar basal-body rod protein flgg, putative [Heliobacterium modesticaldum Ice1] Length = 258 Score = 170 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 51/258 (19%), Positives = 98/258 (37%), Gaps = 22/258 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + +A + + T+++N++N +T G++ + +F +++ + Sbjct: 1 MMRALYSSATGMIAQQLNMDTISNNLANVNTNGYKKSRAEFQDLLYSTIRTATAQVPTGM 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG---IILTRDGRFKVTD 110 Q + V G+ + T D A+ G+ +F L +P TRDG FK+ Sbjct: 61 QVGAGVRPSSITTIISSGNMVQTDNPYDLAITGEGYFRLINPNNDAVPFYTRDGSFKLDK 120 Query: 111 DGSLVSASG----KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 +G LV+A G + L + + I I GE G+ I LY+ Sbjct: 121 EGYLVNADGLRLDGFDPLPEGATDLDINADGMISYKNAVGERVDTGQRI---QLYTFPNP 177 Query: 167 QGFVRRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221 G R + ++ + + + +LE SN + EM MI + + Sbjct: 178 AGLNREGRNLLTQSEASGEAIGGDAGADGRGRIAQRYLESSNVQVVDEMVAMITAQRAYE 237 Query: 222 SITTLIDENEKSMLEAIR 239 T I ++ + +A Sbjct: 238 VNTKAIQTADEMLGQANN 255 >gi|17548568|ref|NP_521908.1| flagellar basal-body rod protein FlgG [Ralstonia solanacearum GMI1000] gi|17430816|emb|CAD17498.1| probable flagellar basal-body rod protein flgg (distal rod protein) [Ralstonia solanacearum GMI1000] Length = 260 Score = 170 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 92/259 (35%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + +L +++N++N +T GF+ + F +++ + Sbjct: 1 MIRSLWISKTGMDAQQSQLDVISNNLANVNTTGFKRSRAVFEDLLYQNVREPGAQSSQQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + G+ TG D A+ G+ +F ++ P G TRDG F Sbjct: 61 TLPSGMQIGTGTRIVATERLHTQGNLQQTGNSTDVAINGNGFFQVQMPDGTLAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 ++ G LV++SG + + V + + T L + Sbjct: 121 QINAQGQLVTSSGYPVQPAITVPQNATSLTVAKDGTVTVTTPGAVNSTQVGTFQLANFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + + + ++E SN N + EM MI + + Sbjct: 181 PAGLRSMGENLYAETEASGTANLAAPGSNGIGVLNQNYVETSNVNVVEEMVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + + Sbjct: 241 EINSKAVQTSDQMLEKLAQ 259 >gi|193222346|emb|CAL62046.2| Flagellar basal-body rod protein FlgG (Distal rod protein) [Herminiimonas arsenicoxydans] Length = 260 Score = 170 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 89/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + ++ +++N++N T GF+ + F +++ Sbjct: 1 MIRSLWISKTGLDAQQTQMDVISNNLANVSTTGFKRSRAVFEDLLYQTIRQPGAASSQQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+ T + A+EGD +F + P TRDG F Sbjct: 61 ELPSGLQLGTGVRPVATERIHTQGNLQLTSNAKNLAIEGDGFFQVLMPDGTTAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 + + G +V++SG + V + I + L + Sbjct: 121 QTDNQGQMVTSSGFPIQPAITIPENATSITISRDGIVSVTVSGTTAATEIGALQLATFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + R + + + +K+ ++E SN N + E+ MI + + Sbjct: 181 PAGLMSRGENLYVETTASGTANTNTPGSNGAGLLKQNYVETSNVNVVEELVSMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + I +++ + + Sbjct: 241 EINSKAITTSDQMLQRLTQ 259 >gi|319944133|ref|ZP_08018411.1| flagellar basal-body rod protein FlgG [Lautropia mirabilis ATCC 51599] gi|319742627|gb|EFV95036.1| flagellar basal-body rod protein FlgG [Lautropia mirabilis ATCC 51599] Length = 260 Score = 170 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 48/259 (18%), Positives = 91/259 (35%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + ++ ++ N++N T G++ + F +++ + Sbjct: 1 MIRSLWIAKTGLDAQQTQMDVISHNLANVSTNGYKRSQAVFEDLIYQNMRQVGAQSSADT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 Q + V G+ T D A+ G +F L+ P G TRDG F Sbjct: 61 QLPTGLQLGTGVRPVATSRLFTQGNLQQTSNSFDLAISGHGFFQLQMPDGTTGYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQ------IPQKDEIFNVGEKGEISQKGKVIATMGL 160 G LV+++G + P + G++G +AT Sbjct: 121 HPDAQGQLVNSNGMPLSPPITIPPGTRDVTVGNDGTVSVTIAGQEGVTQIGQIQLATFQN 180 Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 + QG + S S +++G+LE SN N + E+ MI + + Sbjct: 181 AAGLDPQGQNVFKESDASGTPTAATPGVNGAGLLQQGYLETSNVNVVEELVSMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + I +++ + + Sbjct: 241 EINSKAIQTSDQMLARISQ 259 >gi|293395585|ref|ZP_06639868.1| flagellar basal-body rod protein FlgG [Serratia odorifera DSM 4582] gi|291421904|gb|EFE95150.1| flagellar basal-body rod protein FlgG [Serratia odorifera DSM 4582] Length = 260 Score = 170 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 42/259 (16%), Positives = 89/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + + +A+N++N T GF+ + F +++ Sbjct: 1 MIPSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTMRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+ T D A++G +F + P TRDG F Sbjct: 61 TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGYFQVMLPDGSQAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 ++ +G LV+ASG + + V + + + + L + Sbjct: 121 QIDQNGQLVTASGFQVQPAITIPANALSITVGRDGIVSVTQQGQTAAQQVGQLTLTTFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + +G++E SN N E+ MI + + + Sbjct: 181 DSGLESVGENLYQETESSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + + Sbjct: 241 EINSKAVSTSDQMLQKLTQ 259 >gi|255322391|ref|ZP_05363537.1| flagellar basal-body rod protein FlgG [Campylobacter showae RM3277] gi|255300764|gb|EET80035.1| flagellar basal-body rod protein FlgG [Campylobacter showae RM3277] Length = 262 Score = 170 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 38/261 (14%), Positives = 92/261 (35%), Gaps = 21/261 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S +A + ++ + N++N +T+G++ + +F++++ + Sbjct: 1 MMRSIYSAATGMIAQQTQIDVTSHNIANVNTIGYKKNRAEFADLMYQVMEYAGTATSATT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 G F T LD + G+ +F ++ P TR+G F Sbjct: 61 KSPTGIEVGLGARPTAITKIFSQGYFKETSNNLDMVIAGNGFFQVQLPDGTTAYTRNGAF 120 Query: 107 KVTDDGSLVSASGKY-PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 K+ +G++V++ G V + + + + L + Sbjct: 121 KLDSEGTIVNSDGYVLQPQMTIPADATQVSVGTDGTVSVLQPGNTEMTQVGRIELANFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ P + T+++GF+E SN + EM +I + + Sbjct: 181 PAGLHSMGDNLYLPTGSSGEVVVGTAGLDGLGTIRQGFVEMSNVQLVEEMTDLITGQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + + I ++ + + ++ Sbjct: 241 EANSKAITTSDDML-SIVNSL 260 >gi|238919261|ref|YP_002932776.1| flagellar basal body rod protein FlgG [Edwardsiella ictaluri 93-146] gi|238868830|gb|ACR68541.1| flagellar basal-body rod protein FlgG, putative [Edwardsiella ictaluri 93-146] Length = 260 Score = 170 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 86/259 (33%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + + +A+N++N T GF+ + F +++ Sbjct: 1 MIRSLYIAKTGLEAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTLRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+ T D A++G +F + P TRDG F Sbjct: 61 NLPSGLQLGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVTLPDGSQAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V +G LV+ASG + V + + + + L + Sbjct: 121 QVDQNGQLVTASGFQITPAITIPANATSMTIGRDGIVSVTLQGQAAPQQVGQLTLNTFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + +G++E SN N E+ MI + + Sbjct: 181 DAGLESMGENLYQETASSGSPTESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + I +++ + + Sbjct: 241 EINSKAISTSDQMLQRLTQ 259 >gi|296135671|ref|YP_003642913.1| flagellar basal-body rod protein FlgG [Thiomonas intermedia K12] gi|295795793|gb|ADG30583.1| flagellar basal-body rod protein FlgG [Thiomonas intermedia K12] Length = 261 Score = 170 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 47/261 (18%), Positives = 91/261 (34%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S + A + R+ +A+N++N +T GF+ + F +++ Sbjct: 1 MIRSLYVAKTGLEAEQTRMDVIANNLANVNTSGFKGSRAVFQDLLYQNLTQPGAQSSQST 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+ TG LD A+ G +F + P I TRDG F Sbjct: 61 QYPSGLQLGTGVRPVSTERLMTQGNLTQTGNSLDVAINGQGFFQVLEPNGTIAYTRDGTF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165 ++ + G LV+A+G + + + + L S Sbjct: 121 QLNNQGQLVTANGYLVQPTVTIPASAQSVTIGNDGTVSVTLPGQAAPQQVGALQLASFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ +V++G+LE SN N + E+ MI + + Sbjct: 181 PTGLQSIGDNLYLQTGSSGAPNTGQPTLNGLGSVQQGYLESSNVNVVAELVDMISTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + + +++ + N+ Sbjct: 241 EVNSKAVTASDQMLQYVNNNL 261 >gi|227820858|ref|YP_002824828.1| flagellar basal body rod protein FlgG [Sinorhizobium fredii NGR234] gi|227339857|gb|ACP24075.1| flagellar basal-body rod protein FlgG [Sinorhizobium fredii NGR234] Length = 262 Score = 170 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 45/262 (17%), Positives = 94/262 (35%), Gaps = 21/262 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55 + +I A + L +A+N++N +T G++ + +FS+++ + Sbjct: 1 MKALSIAATGMNAQQLNLEVIANNIANINTTGYKRARAEFSDLLYQTERAQGVPNRSNQA 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 V + GS ++T +LD AL G WF +E+P + TR G F Sbjct: 61 IVPEGAIVGLGVQTAAVRNLHVQGSLVNTSNDLDLALVGRGWFQVETPNGETVYTRSGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 G LV+ G V + V + + + + I + + + Sbjct: 121 NTNATGQLVTIDGYTVVPGITVPQDATEITVSASGQVLVRIGDATETQEIGQLTIANFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + +K+G+LE SN + + E+ +I + + Sbjct: 181 EAGLEPQGENLFKQTAASGEPIVGTPADPGFAQIKQGYLESSNVDPVKEITDLISAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNIA 242 + +I ++ +N+ Sbjct: 241 EMNSKVIQAADEMAATVSKNLR 262 >gi|332161324|ref|YP_004297901.1| flagellar basal-body rod protein FlgG [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318605244|emb|CBY26742.1| flagellar basal-body rod protein FlgG [Yersinia enterocolitica subsp. palearctica Y11] gi|325665554|gb|ADZ42198.1| flagellar basal-body rod protein FlgG [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330860604|emb|CBX70901.1| flagellar basal-body rod protein flgG [Yersinia enterocolitica W22703] Length = 260 Score = 170 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 42/259 (16%), Positives = 89/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + + +A+N++N T GF+ + F +++ Sbjct: 1 MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTMRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V G+ T D A++G+ +F ++ P G TRDG F Sbjct: 61 TLPSGLQIGTGVRPVATERLHSQGNLSKTDNTKDVAIKGEGFFQVQMPDGTNAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQI-PQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 + +G LV++ G + + V + + + L + Sbjct: 121 QTDQNGQLVTSGGFQIQPAITIPANAMSMTVGRDGIVSVTLPGQTATQQVGQLTLATFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 + G + + G + +G++E SN N E+ MI + + Sbjct: 181 NSGLESVGENLYQETASSGAPNETTPGLNGGGLLYQGYVETSNVNVAEELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + + Sbjct: 241 EINSKAVSTSDQMLQKLTQ 259 >gi|16760055|ref|NP_455672.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16764535|ref|NP_460150.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29142174|ref|NP_805516.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56413834|ref|YP_150909.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62179696|ref|YP_216113.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161614598|ref|YP_001588563.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167553033|ref|ZP_02346783.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167994043|ref|ZP_02575135.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168234105|ref|ZP_02659163.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168237261|ref|ZP_02662319.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168244778|ref|ZP_02669710.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168264028|ref|ZP_02686001.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168467131|ref|ZP_02700973.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168822622|ref|ZP_02834622.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194446556|ref|YP_002040433.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194450313|ref|YP_002045178.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194472223|ref|ZP_03078207.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194734396|ref|YP_002114178.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197251031|ref|YP_002146864.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197262058|ref|ZP_03162132.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197362757|ref|YP_002142394.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|200390304|ref|ZP_03216915.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|207857313|ref|YP_002243964.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213424682|ref|ZP_03357447.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213582039|ref|ZP_03363865.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213613179|ref|ZP_03371005.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213648928|ref|ZP_03378981.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213865503|ref|ZP_03387622.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|224584317|ref|YP_002638115.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238911001|ref|ZP_04654838.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289828578|ref|ZP_06546403.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|60392289|sp|P0A1J3|FLGG_SALTY RecName: Full=Flagellar basal-body rod protein flgG; AltName: Full=Distal rod protein gi|60392290|sp|P0A1J4|FLGG_SALTI RecName: Full=Flagellar basal-body rod protein flgG; AltName: Full=Distal rod protein gi|25298926|pir||AD0640 flagellar basal-body rod protein FlgG (distal rod protein) [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|47677|emb|CAA36314.1| flgG protein product (AA 1-260) [Salmonella enterica subsp. enterica serovar Typhimurium] gi|16419696|gb|AAL20109.1| flagellar biosynthesis protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16502349|emb|CAD08303.1| flagellar basal-body rod protein FlgG (distal rod protein) [Salmonella enterica subsp. enterica serovar Typhi] gi|29137804|gb|AAO69365.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56128091|gb|AAV77597.1| flagellar basal-body rod protein FlgG (distal rod protein) [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62127329|gb|AAX65032.1| flagellar biosynthesis, cell-distal portion of basal-body rod [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161363962|gb|ABX67730.1| hypothetical protein SPAB_02348 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194405219|gb|ACF65441.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194408617|gb|ACF68836.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194458587|gb|EDX47426.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194709898|gb|ACF89119.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195630467|gb|EDX49093.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197094234|emb|CAR59739.1| flagellar basal-body rod protein FlgG (distal rod protein) [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197214734|gb|ACH52131.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197240313|gb|EDY22933.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197289797|gb|EDY29158.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|199602749|gb|EDZ01295.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205322431|gb|EDZ10270.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205328014|gb|EDZ14778.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205331903|gb|EDZ18667.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205336447|gb|EDZ23211.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205341038|gb|EDZ27802.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205347402|gb|EDZ34033.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206709116|emb|CAR33449.1| flagellar basal-body rod protein FlgG (distal rod protein) [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224468844|gb|ACN46674.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261246390|emb|CBG24199.1| flagellar basal-body rod protein FlgG (distal rod protein) [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267992953|gb|ACY87838.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157720|emb|CBW17212.1| flagellar basal-body rod protein FlgG (distal rod protein) [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312912166|dbj|BAJ36140.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320086381|emb|CBY96154.1| Flagellar basal-body rod protein flgG Distal rod protein [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321223797|gb|EFX48860.1| Flagellar basal-body rod protein FlgG [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322616549|gb|EFY13458.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322620510|gb|EFY17374.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622504|gb|EFY19349.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629655|gb|EFY26430.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322632625|gb|EFY29371.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636880|gb|EFY33583.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641582|gb|EFY38220.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644072|gb|EFY40618.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650028|gb|EFY46446.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653953|gb|EFY50276.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658485|gb|EFY54747.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322663343|gb|EFY59545.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322670077|gb|EFY66217.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674859|gb|EFY70950.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676671|gb|EFY72738.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682593|gb|EFY78612.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686654|gb|EFY82633.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322714166|gb|EFZ05737.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323129449|gb|ADX16879.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323195768|gb|EFZ80944.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198340|gb|EFZ83444.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323209179|gb|EFZ94116.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323209683|gb|EFZ94612.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217861|gb|EGA02576.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323222149|gb|EGA06533.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323224921|gb|EGA09179.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229663|gb|EGA13786.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323232888|gb|EGA16984.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240623|gb|EGA24665.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323242937|gb|EGA26958.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323250254|gb|EGA34143.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323252629|gb|EGA36467.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323258843|gb|EGA42496.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323261032|gb|EGA44625.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266941|gb|EGA50426.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323269982|gb|EGA53431.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|332988070|gb|AEF07053.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 260 Score = 170 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 88/259 (33%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M +S I A + + +A+N++N T GF+ + F +++ Sbjct: 1 MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V G+ T D A++G +F + P G TRDG F Sbjct: 61 TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGTSAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V +G LV+A G + + V + + + L + Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + +G++E SN N E+ MI + + + Sbjct: 181 DTGLESIGENLYIETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + ++ + + + Sbjct: 241 EINSKAVSTTDQMLQKLTQ 259 >gi|296103609|ref|YP_003613755.1| Flagellar basal-body rod protein, FlgG [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058068|gb|ADF62806.1| Flagellar basal-body rod protein, FlgG [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 260 Score = 170 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 48/259 (18%), Positives = 93/259 (35%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + + +++N++N +T GF+ + F +++ Sbjct: 1 MIRSLWIAKTGLEAQQLNMDVISNNLANVNTNGFKRQRAVFQDLLYQNMRQPGAQSTEQN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G TG E D A+EG+ +F ++ P TRDG F Sbjct: 61 TLPSGLQLGTGVRPVSTQRVHTQGGMNQTGDEYDVAIEGEGFFQVQMPDGSTAYTRDGHF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIP-QKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 + DG LV+A G + V K + + I + L + Sbjct: 121 SKSPDGQLVNAEGYPIQPGIVIPQDATKLNIGSDGIVSVKVPGQAEEQQIGQLTLTTFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 + G + +L+ T+K+ ++E SN N E+ MI + + + Sbjct: 181 NAGLESIGGNLYKETQSSGAPNELNPGMESAGTLKQSYVEISNVNVAEELVTMIQVQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + Sbjct: 241 EINSKAVSASDQMLQRLSQ 259 >gi|260597447|ref|YP_003210018.1| flagellar basal body rod protein FlgG [Cronobacter turicensis z3032] gi|260216624|emb|CBA29921.1| Flagellar basal-body rod protein flgG [Cronobacter turicensis z3032] Length = 260 Score = 170 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 90/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M +S I A + + +A+N++N T GF+ + F +++ Sbjct: 1 MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V G+ T D A++G +F + P G TRDG F Sbjct: 61 TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVLLPDGTSAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V +G LV+A G + + V + + + + L + Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANALSITVGRDGVVSVTQQGTAAPVQVGQINLTTFMN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + + +G++E SN N E+ MI + + + Sbjct: 181 DSGLESIGENLYTETQSSGTPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + ++ + + + Sbjct: 241 EINSKAVSTTDQMLQKLTQ 259 >gi|153831580|ref|ZP_01984247.1| flagellar basal-body rod protein FlgG [Vibrio harveyi HY01] gi|156976143|ref|YP_001447049.1| flagellar basal body rod protein [Vibrio harveyi ATCC BAA-1116] gi|269960118|ref|ZP_06174494.1| Putative flagellar basal-body rod protein flgG [Vibrio harveyi 1DA3] gi|148872090|gb|EDL70907.1| flagellar basal-body rod protein FlgG [Vibrio harveyi HY01] gi|156527737|gb|ABU72822.1| hypothetical protein VIBHAR_04914 [Vibrio harveyi ATCC BAA-1116] gi|269835089|gb|EEZ89172.1| Putative flagellar basal-body rod protein flgG [Vibrio harveyi 1DA3] Length = 261 Score = 170 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 46/261 (17%), Positives = 100/261 (38%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M ++ + A + +++ +++N++N +TVGF+ +V F ++ +I+ Sbjct: 1 MHSALWVSKTGMAAQDTKMTAISNNLANVNTVGFKRDRVVFEDLFYSIQRQPGAQVDQVN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106 Q S V G+ +T ELD A+ G +F +E+ I+ TR+G+F Sbjct: 61 ELPSGVQLGSGVRVVGTQKVFTQGNTQNTTQELDLAVMGQGFFQIENSDGQIMYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 + +G +V++ G + I + V + + + L Sbjct: 121 HINSEGLMVNSQGLPLEPQIQIPDNAISFSVGVDGTVTTTSADDPTPQQLGQITLAKFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + P ++ ++K+G LE SN + EM MI + + Sbjct: 181 PAGLEAVGGNLFRETEASGPADELIAGEDGAGSIKQGALEGSNVQVVEEMVDMITTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 ++ + + +++ Sbjct: 241 EMNAKVVSAADDMLKFVAQSM 261 >gi|70729006|ref|YP_258740.1| flagellar basal body rod protein FlgG [Pseudomonas fluorescens Pf-5] gi|68343305|gb|AAY90911.1| flagellar basal-body rod protein FlgG [Pseudomonas fluorescens Pf-5] Length = 261 Score = 170 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 49/261 (18%), Positives = 94/261 (36%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + L+ +++N++N T GF+ + +F +++ IK Sbjct: 1 MLPALWVAKTGLSAQDTNLTVISNNLANVSTTGFKRDRAEFQDLLYQIKRQPGAQSTQDS 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V + GS +T LD A+ G +F + P TRDG F Sbjct: 61 ELPTGLQVGTGVRIVGTQKNFTAGSLQTTEQPLDLAINGRGFFQILQPDGTTAYTRDGTF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 + DG +V+ASG + Q + V + +VI + Sbjct: 121 HLNSDGQIVTASGFALEPAVVVPNDAQTFTVGQDGTVSITIAGNPASQVIGNLQTADFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + N+ + T + LE SN +++ EM MI + + Sbjct: 181 PAGLQAQGNNLFLETAASGAPQIGTPGLNGFGTTLQNTLEASNVSTVEEMVNMITTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + +I ++ + + + Sbjct: 241 EMNSKVISTADQMLSFITQKL 261 >gi|198244335|ref|YP_002215958.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|197938851|gb|ACH76184.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|326623706|gb|EGE30051.1| flagellar basal-body rod protein FlgG [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 260 Score = 170 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 88/259 (33%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M +S I A + + +A+N++N T GF+ + F +++ Sbjct: 1 MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSGQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V G+ T D A++G +F + P G TRDG F Sbjct: 61 TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGTSAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V +G LV+A G + + V + + + L + Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + +G++E SN N E+ MI + + + Sbjct: 181 DTGLESIGENLYIETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + ++ + + + Sbjct: 241 EINSKAVSTTDQMLQKLTQ 259 >gi|156934438|ref|YP_001438354.1| flagellar basal body rod protein FlgG [Cronobacter sakazakii ATCC BAA-894] gi|156532692|gb|ABU77518.1| hypothetical protein ESA_02269 [Cronobacter sakazakii ATCC BAA-894] Length = 260 Score = 170 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 90/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M +S I A + + +A+N++N T GF+ + F +++ Sbjct: 1 MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V G+ T D A++G +F + P G TRDG F Sbjct: 61 TLPSGLQIGTGVRPVATERLHTQGNLSQTNNSKDVAIKGQGFFQVLLPDGTSAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V +G LV+A G + + V + + + + L + Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANALSITVGRDGVVSVTQQGTAAPVQVGQINLTTFMN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + + +G++E SN N E+ MI + + + Sbjct: 181 DSGLESIGENLYTETQSSGTPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + ++ + + + Sbjct: 241 EINSKAVSTTDQMLQKLTQ 259 >gi|83747652|ref|ZP_00944688.1| FlgG [Ralstonia solanacearum UW551] gi|207728348|ref|YP_002256742.1| flagellar basal-body rod protein flgg (distal rod protein) [Ralstonia solanacearum MolK2] gi|207739735|ref|YP_002258128.1| flagellar basal-body rod protein flgg (distal rod protein) [Ralstonia solanacearum IPO1609] gi|300696915|ref|YP_003747576.1| FlgG: flagellar basal-body rod protein [Ralstonia solanacearum CFBP2957] gi|83725704|gb|EAP72846.1| FlgG [Ralstonia solanacearum UW551] gi|206591594|emb|CAQ57206.1| flagellar basal-body rod protein flgg (distal rod protein) [Ralstonia solanacearum MolK2] gi|206593117|emb|CAQ60023.1| flagellar basal-body rod protein flgg (distal rod protein) [Ralstonia solanacearum IPO1609] gi|299073639|emb|CBJ53159.1| FlgG: Flagellar basal-body rod protein [Ralstonia solanacearum CFBP2957] Length = 260 Score = 170 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 91/259 (35%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + +L +++N++N +T GF+ + F +++ + Sbjct: 1 MIRSLWISKTGMDAQQSQLDVISNNLANVNTTGFKRSRAVFEDLLYQNVREPGAQSSQQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + G+ TG D A+ G+ +F ++ P G TRDG F Sbjct: 61 TLPSGMQIGTGTRIVATERLHTQGNLQQTGNSTDVAINGNGFFQVQMPDGTLAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 ++ G LV++SG + + V + + T L + Sbjct: 121 QINAQGQLVTSSGYPVQPAVTVPQNATSLTIAKDGTVTVTTPGAVNSTQVGTFQLANFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + + ++E SN N + EM MI + + Sbjct: 181 PAGLRSMGENLYAETEASGTANLAAPGANGVGVLNQNYVETSNVNVVEEMVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + + Sbjct: 241 EINSKAVQTSDQMLEKLAQ 259 >gi|289666050|ref|ZP_06487631.1| flagellar basal body rod protein FlgG [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289670510|ref|ZP_06491585.1| flagellar basal body rod protein FlgG [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 261 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 48/261 (18%), Positives = 90/261 (34%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + R+S +++N++NT+T GF+ + F +++ Sbjct: 1 MNQALWVAKTGLDAQQTRMSVISNNLANTNTTGFKRDRAAFEDLLYQQVRAPGGSTSAQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V + + GS TG LD + G +F ++ P G TRDG F Sbjct: 61 QLPTGLQLGTGVRVVSTFKGFDQGSQQQTGRALDVMVNGRGFFEVQMPDGTSAYTRDGTF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165 ++ G LV+ SG + + I + L Sbjct: 121 QINAQGQLVTNSGYPLQPGIQVPEGAQSLTIGNDGTISVTLAGQAAAQEIGALTLTDFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + P ++ + +G LE SN N++ E+ MI + + Sbjct: 181 PSGLQAKGENLFVETTASGPAQNGTPGLNGLGNTVQGALEGSNVNTVEELVSMIETQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 I + + N+ Sbjct: 241 EMNAKAISTTDSMLGYLNNNV 261 >gi|289208116|ref|YP_003460182.1| flagellar basal-body rod protein FlgG [Thioalkalivibrio sp. K90mix] gi|288943747|gb|ADC71446.1| flagellar basal-body rod protein FlgG [Thioalkalivibrio sp. K90mix] Length = 262 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 51/262 (19%), Positives = 92/262 (35%), Gaps = 20/262 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + I A R+STV++N++N +T GF+ + F +++ Sbjct: 1 MNQALWIAKTGLDAQHTRMSTVSNNLANVNTTGFKKDRAVFEDLIYQTVRQPGAQATQDQ 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V + G+ T LD A+EG +F + P I TRDG F Sbjct: 61 QLPSGLQIGTGVRAVSTEKMFTQGNLQQTDNSLDVAIEGRGFFQVLMPNGDIGYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 ++ DG +V ++G + P + V + + + + L Sbjct: 121 QLNADGEVVMSNGYPLQPGLFVPPDTQSLAIGKDGTVTAQIPGQAEPVELGNIQLADFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + T+ +G LE SN N E+ MI + + Sbjct: 181 PAGLQAIGENLFQETAASGVAQQAQPGLNGTGTLVQGSLETSNVNIAEELVNMIETQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNIA 242 + I ++S+ + I Sbjct: 241 EVNSKAISAADQSLQFVNQTIG 262 >gi|146311248|ref|YP_001176322.1| flagellar basal body rod protein FlgG [Enterobacter sp. 638] gi|145318124|gb|ABP60271.1| flagellar basal-body rod protein FlgG [Enterobacter sp. 638] Length = 260 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 89/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M +S I A + + +A+N++N T GF+ + F +++ Sbjct: 1 MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V G+ T D A++G +F ++ P G TRDG F Sbjct: 61 TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVQLPDGTSAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V +G LV+A G + + V + + + L + Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANSLSITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + +G++E SN N E+ MI + + + Sbjct: 181 DTGLESIGENLYTETQSSGAPNESTPGLNGSGLLYQGYVETSNVNVAEELVNMIQVQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + ++ + + + Sbjct: 241 EINSKAVSTTDQMLQKLTQ 259 >gi|237750021|ref|ZP_04580501.1| flagellar distal rod protein FlgG [Helicobacter bilis ATCC 43879] gi|229374432|gb|EEO24823.1| flagellar distal rod protein FlgG [Helicobacter bilis ATCC 43879] Length = 262 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 49/256 (19%), Positives = 96/256 (37%), Gaps = 20/256 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S L + ++ T ++N++N +TVGF+ + +F+++ + Sbjct: 1 MMRSLYTATTGMLGQQLQIDTTSNNIANVNTVGFKRQRAEFNDLFYQTLQFAGTQTSETT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 V +G GS T LD A+ G +F ++ P I TR G F Sbjct: 61 LTPTGIEVGVGVRTGAINRIYSQGSPKETENPLDVAIMGKGFFPIQLPDGNIAYTRSGNF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165 K+ D G++V++ G + P + + +V+ + L + Sbjct: 121 KLDDQGNIVTSEGYLVQPQITVPPEAQSINIGADGTVSVTLGNNGQAEVLGQIQLVNFVN 180 Query: 166 SQGFVRRENS-GISPNIPPTPLE----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ ++ N P+E ++ GFLE SN + EM +I + + Sbjct: 181 PAGLHGLGDNLYMNTNASGEPIEGIAGQDGLGQIRAGFLELSNVRLVSEMTDLITGQRAY 240 Query: 221 NSITTLIDENEKSMLE 236 + + I + + Sbjct: 241 EANSKSIQTADSMLQT 256 >gi|320354342|ref|YP_004195681.1| flagellar basal-body rod protein FlgG [Desulfobulbus propionicus DSM 2032] gi|320122844|gb|ADW18390.1| flagellar basal-body rod protein FlgG [Desulfobulbus propionicus DSM 2032] Length = 260 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 45/258 (17%), Positives = 84/258 (32%), Gaps = 20/258 (7%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 S A + +A+N++N T GF+ + F +++ I Sbjct: 1 MRSLWTSTTGMSAQNLNMDVIANNLANVSTTGFKKSRADFQDLLYQIMKVPGSPTSADTR 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFK 107 Q V G + T LD A+EG +F + P I TR G K Sbjct: 61 SPTGIQVGLGVKPAAVTKVFTEGDIVQTENTLDVAIEGPGFFQVTLPDGNIAYTRAGNLK 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 + +G L ++ G ++ + + V + + L Sbjct: 121 LDGEGRLTTSDGFPIEPEIVIPEDAREVTISQTGVVSAIVGDDTTSTELGNVDLVDFVND 180 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFN 221 G + + + T + +G++E+SN N + EM MI + F Sbjct: 181 AGLIAIGRNLFRETEASGAPLIGAPGTNGIGTLLQGYVENSNVNLVEEMTHMITTQRAFE 240 Query: 222 SITTLIDENEKSMLEAIR 239 + +I +++ M Sbjct: 241 INSNVITTSDEMMQTVTN 258 >gi|258514025|ref|YP_003190247.1| flagellar basal-body rod protein FlgF [Desulfotomaculum acetoxidans DSM 771] gi|257777730|gb|ACV61624.1| flagellar basal-body rod protein FlgF [Desulfotomaculum acetoxidans DSM 771] Length = 255 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 54/256 (21%), Positives = 107/256 (41%), Gaps = 16/256 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50 M G A L+++++ +A+N++N +T GF+ + + N Sbjct: 1 MIRGIYSGAAGMNVLQEKMNVMANNLANVNTNGFKMDQAVVKSFNEQLINLIDTGKDIRK 60 Query: 51 --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 I V + G F TG + D AL+G+ +F + G TRDG F + Sbjct: 61 LRPIGNFCHGVTVDEINTYFTQGVFQQTGHDTDLALDGEGFFRVSGAEGDYYTRDGAFSL 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 ++G LV++ G + + + + +G G+I G T+ + + D Q Sbjct: 121 DNEGYLVTSRGYTLMG---QNGPVMTEPGKNLKIGSDGKIYLDGVEQDTLDIKNFDDLQK 177 Query: 169 FVRRENSGISPNIPPTPLEDLSGV-TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 + ++ + T+K+GFLE SN + EM +I +++ + + L+ Sbjct: 178 LKKEGDNFFRVENEADAGVYDATNFTLKQGFLEKSNVELVNEMTDIIAVSRAYETSQKLM 237 Query: 228 DENEKSMLEAIRNIAS 243 ++ + +A+ NI + Sbjct: 238 QVQDELLGKAVNNIGT 253 >gi|325291945|ref|YP_004277809.1| flagellar basal body rod protein FlgF [Agrobacterium sp. H13-3] gi|325059798|gb|ADY63489.1| flagellar basal body rod protein FlgF [Agrobacterium sp. H13-3] Length = 244 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 106/242 (43%), Positives = 162/242 (66%), Gaps = 1/242 (0%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 MQ+ + L++Q+ALE+RL+T++DNM+N +TVGFR +VKF E+V ND++ K++FV+ Sbjct: 1 MQSGLYVALSSQIALERRLTTISDNMANANTVGFRGSEVKFDEMVAKNHNDMNAKVAFVS 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 G +YLS G+F TG DFA++GDAWFA+++P G IL+RDGRF + DG+L+S+SG Sbjct: 61 QGNDYLSTRQGAFEQTGNSFDFAIKGDAWFAMDTPDGQILSRDGRFTMRPDGALISSSGY 120 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 PVLD PIQ+ V G I Q ++AT+G++ D S+GF+R NSG+ P Sbjct: 121 -PVLDAGGGPIQLNANGGPITVSLDGAIRQNDNIVATLGVFQADFSKGFLRHPNSGVKPV 179 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 PPTP+ + V V +G+LE SN N + +M Q+I + + F SI++L+ + E + +AI+ Sbjct: 180 APPTPVVNNHEVGVVQGYLEQSNVNGISQMTQLIQVNRAFESISSLMRDTESTFGDAIKT 239 Query: 241 IA 242 + Sbjct: 240 LG 241 >gi|297538898|ref|YP_003674667.1| flagellar basal-body rod protein FlgG [Methylotenera sp. 301] gi|297258245|gb|ADI30090.1| flagellar basal-body rod protein FlgG [Methylotenera sp. 301] Length = 260 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 90/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + ++ +A+N++N T GF+ + F +++ Sbjct: 1 MIRSLWISKTGLDAQQTQMDVIANNLANVSTNGFKRSRAVFEDLLYQNIRQPGAQTSQQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+ T D A++G +F + P TRDG F Sbjct: 61 QLPSGLQLGTGVRPVATERIFSQGNLQQTSNNKDVAIQGAGFFQVLMPDGTTAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 + G LV++SG + + V S I T+ L + Sbjct: 121 QTDSQGQLVTSSGFPVQPAITVPANAESFTVGRDGTVSITTTGSTATTQIGTLQLATFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 + G + + + T + +G++E SN N + E+ MI + + Sbjct: 181 TAGLQGKGENLFVETTASGNPTVNNPGTNGAGLLTQGYVETSNVNVVEELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + I +++ + + + Sbjct: 241 EINSKAITTSDQMLQKLTQ 259 >gi|39998142|ref|NP_954093.1| flagellar basal body rod protein FlgG [Geobacter sulfurreducens PCA] gi|39985088|gb|AAR36443.1| flagellar basal-body rod protein FlgG [Geobacter sulfurreducens PCA] gi|298507079|gb|ADI85802.1| flagellar basal body rod protein FlgG [Geobacter sulfurreducens KN400] Length = 262 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 48/259 (18%), Positives = 89/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + + VA+N++N +T GF+ + F +++ Sbjct: 1 MIRALWTAASGMQAQQTNIDVVANNLANVNTAGFKKSRADFQDLMYQNLKTSGAPSTSST 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q G+ TG ELD A+EGD +F ++ P +R G F Sbjct: 61 QVPSGIQIGLGAKLAAVTKLFSEGNINQTGNELDIAIEGDGFFQIQMPDGTTTYSRAGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 K D G +V++ G + ++ V I + L + Sbjct: 121 KRDDQGRVVTSDGYPMLPELVVPSNATSISVGNDGTVSVTQAGQTSPTNIGNIQLATFSN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + T+ +GFLE SN + M EM MI + + Sbjct: 181 PSGLTALGRNLFQESDSSGTPTTGTPGQNGIGTLAQGFLEMSNVSVMEEMVNMIVGQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + ++ + +A Sbjct: 241 EVNSKAVQAADEMLQQANN 259 >gi|299068734|emb|CBJ39973.1| FlgG: Flagellar basal-body rod protein [Ralstonia solanacearum CMR15] Length = 260 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 91/259 (35%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + +L +++N++N +T GF+ + F +++ + Sbjct: 1 MIRSLWISKTGMDAQQSQLDVISNNLANVNTTGFKRSRAVFEDLLYQNVREPGAQSSQQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + G+ TG D A+ G+ +F ++ P G TRDG F Sbjct: 61 TLPSGMQIGTGTRIVATERLHTQGNLQQTGNSTDVAINGNGFFQVQMPDGTLAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 ++ G LV++SG + + V + + T L + Sbjct: 121 QINAQGQLVTSSGYPVQPAVTVPQNATSLTVAKDGTVTVTTPGAVNSTQVGTFQLANFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + + ++E SN N + EM MI + + Sbjct: 181 PAGLRSMGENLYAETEASGTANLAAPGANGVGVLNQNYVETSNVNVVEEMVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + + Sbjct: 241 EINSKAVQTSDQMLEKLAQ 259 >gi|309388846|gb|ADO76726.1| flagellar basal-body rod protein FlgG [Halanaerobium praevalens DSM 2228] Length = 260 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 46/260 (17%), Positives = 96/260 (36%), Gaps = 21/260 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M ++ + + + +++N++N +T GF+ K+ F++++ Sbjct: 1 MISALWTSATGMNSQQTNIDVISNNLANVNTSGFKKSKINFADLIYTQMRQPGTPNAQGA 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 G+ +T + LD +EGD F ++ P G TRDG F Sbjct: 61 EVPTGIEIGHGSKVNSTQKIFTQGNIQNTDSPLDMVIEGDGLFRVQLPDGNFAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 K +G++V++ G +P + + + + + + + + LY Sbjct: 121 KQDSNGNVVTSDGYQLD-PGFQIPQEATEISITSDGTINALVDGENQQLGQIQLYRFANP 179 Query: 167 QGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221 G + S + TV +GFLE SN + EM MI + + Sbjct: 180 AGLSSEGRNLYSDTVASGQAMQGVPGEQGFGTVTQGFLEMSNVKVVEEMVNMIAAQRAYE 239 Query: 222 SITTLIDENEKSMLEAIRNI 241 + + I +++ + A + Sbjct: 240 TNSKSIQASDEMLQTA-NQL 258 >gi|300693340|ref|YP_003749313.1| flgg: flagellar basal-body rod protein [Ralstonia solanacearum PSI07] gi|299075377|emb|CBJ34672.1| FlgG: Flagellar basal-body rod protein [Ralstonia solanacearum PSI07] Length = 260 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 91/259 (35%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + +L +++N++N +T GF+ + F +++ + Sbjct: 1 MIRSLWISKTGMDAQQSQLDVISNNLANVNTTGFKRSRAVFEDLLYQNVREPGAQSSQQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + G+ TG D A+ G+ +F ++ P G TRDG F Sbjct: 61 TLPSGMQIGTGTRIVATERLHTQGNLQQTGNSTDAAINGNGFFQVQMPDGTLAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 ++ G LV++SG + + V S + T L + Sbjct: 121 QINAQGQLVTSSGYPVQPAITVPQNATSLTIAKDGVVTVTTPGSVNSTQVGTFQLANFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + + ++E SN N + EM MI + + Sbjct: 181 PAGLRSMGENLYAETEASGTANLAAPGANGIGVLNQNYVETSNVNVVEEMVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + + Sbjct: 241 EINSKAVQTSDQMLEKLAQ 259 >gi|254473318|ref|ZP_05086715.1| flagellar basal-body rod protein FlgG [Pseudovibrio sp. JE062] gi|211957434|gb|EEA92637.1| flagellar basal-body rod protein FlgG [Pseudovibrio sp. JE062] Length = 262 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 40/256 (15%), Positives = 83/256 (32%), Gaps = 21/256 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + I A ++ L +++N++N +T F+ + +FS+++ + Sbjct: 1 MKALAIAATGMSAQQKNLEVISNNIANMNTTAFKASRAEFSDLLYQMDRAAGVSNRGGAA 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 Q+ V + G T D A++G WF + P G TR G F Sbjct: 61 PVPEGIQQGLGVKTAAIRELHSKGPLNHTTNTFDLAIDGQGWFEVVGPDGEALYTRAGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-IATMGLYSVDM 165 V +G+LV+ G + + I + L S Sbjct: 121 NVNGEGALVTLDGYEVQPGITVPIDAVKITVNESGEVFATYADGNPATSIGQLSLTSFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + +++G+LE +N + + E+ +I + + Sbjct: 181 DAGLRAIGGNLFRETEASGAPNTGIAGEGPLGVIRQGYLEGANVDPVKEITSLISAQRGY 240 Query: 221 NSITTLIDENEKSMLE 236 + +I + Sbjct: 241 EMNSKVIQAADDMAGT 256 >gi|88799023|ref|ZP_01114604.1| Flagellar basal body rod protein [Reinekea sp. MED297] gi|88778250|gb|EAR09444.1| Flagellar basal body rod protein [Reinekea sp. MED297] Length = 261 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 92/261 (35%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + +G A + LST+++N++N T G++ + F +++ ++ Sbjct: 1 MHKALWVGKTGLEAQDIALSTISNNLANAATTGYKKERAVFEDLIYQVQRQPGAQSSQNT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V + G T LD A+ G +F + P I TRDG F Sbjct: 61 QLPSGLQLGTGVRTVGTQKQFVQGDLNMTEQPLDMAINGRGFFQVLMPDGNIAYTRDGTF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 + +G++V+A+G + ++ V I + + Sbjct: 121 HLDAEGNVVTANGYFLEPNIQVPEQTKTITVGTDGIVTAVSAGDNDPVEIGNIDIVDFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G N+ + ++ +G LE+SN + EM MI + + Sbjct: 181 PAGLQAIGNNLFLETAASGAPAEGVPSLDGFGSIIQGALENSNVTIVEEMVDMISTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + + ++ + N+ Sbjct: 241 EMNSKAVSTADQMLGFITSNL 261 >gi|84624090|ref|YP_451462.1| flagellar basal body rod protein FlgG [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|161898985|ref|YP_201214.2| flagellar basal body rod protein FlgG [Xanthomonas oryzae pv. oryzae KACC10331] gi|166712060|ref|ZP_02243267.1| flagellar basal body rod protein FlgG [Xanthomonas oryzae pv. oryzicola BLS256] gi|188576758|ref|YP_001913687.1| flagellar basal body rod protein FlgG [Xanthomonas oryzae pv. oryzae PXO99A] gi|188576950|ref|YP_001913879.1| flagellar basal body rod protein FlgG [Xanthomonas oryzae pv. oryzae PXO99A] gi|84368030|dbj|BAE69188.1| flagellar biosynthesis cell-distal portion of basal-body rod [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188521210|gb|ACD59155.1| flagellar basal-body rod protein FlgG [Xanthomonas oryzae pv. oryzae PXO99A] gi|188521402|gb|ACD59347.1| flagellar basal-body rod protein FlgG [Xanthomonas oryzae pv. oryzae PXO99A] Length = 261 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 48/261 (18%), Positives = 90/261 (34%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + R+S +++N++NT+T GF+ + F +++ Sbjct: 1 MNQALWVAKTGLDAQQTRMSVISNNLANTNTTGFKRDRAAFEDLLYQQVRAPGGSTSAQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V + + GS TG LD + G +F ++ P G TRDG F Sbjct: 61 QLPTGLQLGTGVRVVSTFKGFDQGSQQQTGRALDVMVNGRGFFEVQMPDGTSAYTRDGTF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165 ++ G LV+ SG + + I + L Sbjct: 121 QINAQGQLVTNSGYPLQPGIQVPEGAQSLTIGNDGTISVTLAGQAAAQEIGALTLTDFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + P ++ + +G LE SN N++ E+ MI + + Sbjct: 181 PSGLQSKGENLFVETTASGPAQNGTPGLNGLGNTVQGALEGSNVNTVEELVSMIETQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 I + + N+ Sbjct: 241 EMNAKAISTTDAMLGYLNNNV 261 >gi|50120641|ref|YP_049808.1| flagellar basal body rod protein FlgG [Pectobacterium atrosepticum SCRI1043] gi|49611167|emb|CAG74613.1| flagellar basal-body rod protein [Pectobacterium atrosepticum SCRI1043] Length = 260 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 89/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + + +++N++N T GF+ + F +++ Sbjct: 1 MIRSLWIAKTGLNAQQTNMDVISNNLANVSTNGFKRQRAVFEDLMYQTIRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+F TG D A++G +F ++ P TRDG F Sbjct: 61 MLPSGLQLGTGVRPVSTERIHTQGTFSETGNSKDVAIKGQGFFQVQLPDGTTAYTRDGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIP-QKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 ++ +G LV++SG + V K + I + L + Sbjct: 121 QLDGNGQLVTSSGYQVQPAITVPANATELNIGRDGIVSVKVQGQAATNQIGQLTLTTFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + + ++E SN N E+ MI + + Sbjct: 181 DSGLESMGENLYLETASSGAPNETNPGLNGAGLLYQKYVETSNVNVAEELVSMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + I +++ + + + Sbjct: 241 EINSKAISSSDQMLQKLTQ 259 >gi|308050022|ref|YP_003913588.1| flagellar basal-body rod protein FlgG [Ferrimonas balearica DSM 9799] gi|307632212|gb|ADN76514.1| flagellar basal-body rod protein FlgG [Ferrimonas balearica DSM 9799] Length = 261 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 49/261 (18%), Positives = 100/261 (38%), Gaps = 21/261 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 MQ++ + A + +++T+A+N++N +T GF+ +V F+++ + Sbjct: 1 MQSALWVSKTGLTAQDTKMTTIANNLANVNTTGFKRDRVSFNDLFYQTQRQPGAMADQQN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V G I+T LD A+ G +F +E P G TRDG+F Sbjct: 61 ELPSGLQLGTGVRITGTQKVFTTGDIITTNQPLDLAIMGQGFFQVEQPNGDFAYTRDGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 DG +V++ G V + + V + + + + L + Sbjct: 121 YRNADGLVVTSEGMPLVPAVEIPEDALTVTVGSDGIVTAQIAGDAVPQELGQITLANFTN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G N+ + + +K+G LE +N N + EM +MI + + Sbjct: 181 PAGLEAFGNNLYRETAASGVAIEGIPGDAAIGQLKQGTLEGANVNVVEEMVEMISTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 ++ + + + + + Sbjct: 241 EMNAKVVSSTDDML-KYLNQV 260 >gi|261821155|ref|YP_003259261.1| flagellar basal body rod protein FlgG [Pectobacterium wasabiae WPP163] gi|261605168|gb|ACX87654.1| flagellar basal-body rod protein FlgG [Pectobacterium wasabiae WPP163] Length = 260 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 89/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + + +++N++N T GF+ + F +++ Sbjct: 1 MIRSLWIAKTGLNAQQTNMDVISNNLANVSTNGFKRQRAVFEDLMYQTVRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+F TG D A++G +F ++ P TRDG F Sbjct: 61 MLPSGLQLGTGVRPVSTERIHTQGTFSETGNSKDVAIKGQGFFQVQLPDGTTAYTRDGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIP-QKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 ++ +G LV++SG + V K + I + L + Sbjct: 121 QLDGNGQLVTSSGYQVQPAITVPANATELNIGRDGIVSVKLQGQAATNQIGQLTLTTFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + + ++E SN N E+ MI + + Sbjct: 181 DSGLESMGENLYLETASSGAPNESNPGLNGAGLLFQKYVETSNVNVAEELVSMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + I +++ + + + Sbjct: 241 EINSKAISSSDQMLQKLTQ 259 >gi|227328340|ref|ZP_03832364.1| flagellar basal body rod protein FlgG [Pectobacterium carotovorum subsp. carotovorum WPP14] gi|253688970|ref|YP_003018160.1| flagellar basal-body rod protein FlgG [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251755548|gb|ACT13624.1| flagellar basal-body rod protein FlgG [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 260 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 89/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + + +++N++N T GF+ + F +++ Sbjct: 1 MIRSLWIAKTGLNAQQTNMDVISNNLANVSTNGFKRQRAVFEDLMYQTVRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+F TG D A++G +F ++ P TRDG F Sbjct: 61 MLPSGLQLGTGVRPVSTERIHTQGTFSETGNSKDVAIKGQGFFQVQLPDGTTAYTRDGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIP-QKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 ++ +G LV++SG + V K + I + L + Sbjct: 121 QLDGNGQLVTSSGYQVQPAITVPANATELNIGRDGIVSVKVQGQAATNQIGQLTLTTFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + + ++E SN N E+ MI + + Sbjct: 181 DSGLESMGENLYLETASSGAPNETNPGLNGAGLLYQKYVETSNVNVAEELVSMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + I +++ + + + Sbjct: 241 EINSKAISSSDQMLQKLTQ 259 >gi|161503733|ref|YP_001570845.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160865080|gb|ABX21703.1| hypothetical protein SARI_01818 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 260 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 88/259 (33%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M +S I A + + +A+N++N T GF+ + F +++ Sbjct: 1 MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V G+ T D A++G +F + P G TRDG F Sbjct: 61 TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGTSAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V +G LV+A G + + V + + + L + Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANALNITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + +G++E SN N E+ MI + + + Sbjct: 181 DTGLESIGENLYIETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + ++ + + + Sbjct: 241 EINSKAVSTTDQMLQKLTQ 259 >gi|95929874|ref|ZP_01312615.1| Flagellar basal-body rod FlgG [Desulfuromonas acetoxidans DSM 684] gi|95134170|gb|EAT15828.1| Flagellar basal-body rod FlgG [Desulfuromonas acetoxidans DSM 684] Length = 261 Score = 169 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 86/261 (32%), Gaps = 21/261 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + + + +A+N++N +T GF+ + F E++ + Sbjct: 1 MIRALWTAATGMDSQQTNIDVIANNLANVNTSGFKKSRADFQELLYQVSKTPGSSTSADT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + G + T ELD A+EG +F +E P TR G Sbjct: 61 VSPTGIQVGLGSRTAAVQKVFSTGDMMQTENELDLAIEGRGFFQVEMPDGTTAYTRSGAL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 K DG L ++ G + + V + I + + Sbjct: 121 KKDGDGRLTTSEGYLLTPQIVIPENTTSISIGQDGTVDVFLDGESTSTEIGVIEMAIFSN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + T+ +G+LE SN + M EM MI + + Sbjct: 181 ESGLRSLGRNLFAETLSSGVANTGIPGENGLGTLSQGYLEGSNVSVMEEMVNMIAGQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + I ++ + + N+ Sbjct: 241 EVNSKAIQTADEML-QMTNNL 260 >gi|189426331|ref|YP_001953508.1| flagellar basal body rod protein [Geobacter lovleyi SZ] gi|189422590|gb|ACD96988.1| flagellar basal body rod protein [Geobacter lovleyi SZ] Length = 258 Score = 169 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 58/256 (22%), Positives = 108/256 (42%), Gaps = 14/256 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND-----IDQK 55 M + L+ LA +RL ++ N++N T GF+ ++ F V+ +N Sbjct: 1 MNSGMYSALSGNLAAMKRLDVISSNLANASTNGFKQDRLAFESVLAGNRNPPAVPPSQTA 60 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115 + + G+ + TG LD AL+GD +F + +P G+ TR G F++ DG+L+ Sbjct: 61 DPVLLQERMLTDYSAGTLVQTGNTLDVALQGDGFFVVRTPEGVAYTRQGNFRLASDGTLI 120 Query: 116 SASGKYPVLDMASVPIQIPQKDEI---------FNVGEKGEISQKGKVIATMGLYSVDMS 166 +A G + P V +G I+ G+ +A + L+ Sbjct: 121 TADGYQVLSKAGERPEDGQPIRIDVAGQDGGGRPVVDSQGGITINGEPVANLALFDFPKP 180 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 + ++ P TV +G LE SN N++ EM QM+ ++ F + + Sbjct: 181 YQLTKTASTLFVPAAGTAVQAAGPLTTVAQGALEQSNVNTIAEMVQMVDASRYFETCQRV 240 Query: 227 IDENEKSMLEAIRNIA 242 + + +A+ ++A Sbjct: 241 VRSFDDMAAKAVNDLA 256 >gi|117926379|ref|YP_866996.1| flagellar basal-body rod protein FlgG [Magnetococcus sp. MC-1] gi|117610135|gb|ABK45590.1| flagellar basal-body rod protein FlgG [Magnetococcus sp. MC-1] Length = 263 Score = 169 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 48/260 (18%), Positives = 89/260 (34%), Gaps = 21/260 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + A + + +A+N++NT+T GF+ + F +++ Sbjct: 1 MIRALWTSATGMQAQQTNIDVIANNLANTNTAGFKRSRADFQDLLYQNMRAAGAATSQAG 60 Query: 54 -------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGR 105 Q V + G ++ TG ELD A+EG +F ++ P TRDG Sbjct: 61 NQVPVGIQLGHGVRTVSVSKMFTQGDYVQTGNELDMAIEGKGFFQIQMPDGSTAYTRDGT 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVD 164 FK+ + G +V+A G + V K + + L Sbjct: 121 FKLDNSGQIVTADGYVLDPGLTLPQNATNVAVGPDGTVAVKTPDQADLTQVGQIQLAQFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + + + TV++ +LE SN N + EM MI + Sbjct: 181 NPAGLNAIGRNLYTESGASGAPVVGTAGEDGLGTVQQQYLELSNVNMVEEMVNMIASQRA 240 Query: 220 FNSITTLIDENEKSMLEAIR 239 + + + + + + Sbjct: 241 YEINSKTVQTADDMLGKVAS 260 >gi|328545505|ref|YP_004305614.1| flagellar basal-body rod protein FlgG [polymorphum gilvum SL003B-26A1] gi|326415246|gb|ADZ72309.1| Flagellar basal-body rod protein FlgG [Polymorphum gilvum SL003B-26A1] Length = 262 Score = 169 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 39/262 (14%), Positives = 89/262 (33%), Gaps = 21/262 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----------- 50 + I A + + +A+N++N +T ++ + +FS+++ + Sbjct: 1 MKALAIAATGMSAQQLNVEVIANNIANMNTTAYKRARAEFSDLLYQAERLQGVPNRGGED 60 Query: 51 ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + Q V + G+ +T +LD A++G WF + P + TR G F Sbjct: 61 PVPEGAQLGLGVKTAAIRKLHMQGTLTNTDNKLDLAIDGRGWFQVTGPEGETLYTRAGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE-KGEISQKGKVIATMGLYSVDM 165 +G LV+ G + P + + + + + L + Sbjct: 121 NKNAEGRLVTLDGYGIEPAILFPPDTVDIIINESGQVFAQVAGELNPRELGQLALTNFAN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + D +++G+ E SN + + E+ ++I + + Sbjct: 181 DVGLEPVGGNLFRETPASGIGLDGVAGDPGFGVIRQGYQEASNVDPVKEITELISAQRGY 240 Query: 221 NSITTLIDENEKSMLEAIRNIA 242 + +I + + I Sbjct: 241 EMNSKVIQAADDMAGTVTKGIR 262 >gi|195940720|ref|ZP_03086102.1| flagellar basal body rod protein FlgG [Escherichia coli O157:H7 str. EC4024] gi|295096223|emb|CBK85313.1| flagellar basal-body rod protein FlgG, Gram-negative bacteria [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 260 Score = 169 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 90/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M +S I A + + +A+N++N T GF+ + F +++ Sbjct: 1 MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V G+ T D A++G +F ++ P G TRDG F Sbjct: 61 TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVQLPDGTSAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V +G LV+A G + + V + + + L + Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGIVSVTQQGQAAPVQVGQLNLTTFMN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + + +G++E SN N E+ MI + + + Sbjct: 181 DTGLESIGENLYTETQSSGTPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + ++ + + + Sbjct: 241 EINSKAVSTTDQMLQKLTQ 259 >gi|237731009|ref|ZP_04561490.1| flagellar basal body rod protein FlgG [Citrobacter sp. 30_2] gi|226906548|gb|EEH92466.1| flagellar basal body rod protein FlgG [Citrobacter sp. 30_2] Length = 260 Score = 169 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 89/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M +S I A + + +A+N++N T GF+ + F +++ Sbjct: 1 MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V G+ T D A++G +F + P G TRDG F Sbjct: 61 TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGTSAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V +G LV+A G + + V + + + L + Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANSLSITIGRDGIVSVTQQGQAAPVQVGQLNLTTFMN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + + +G++E SN N E+ MI + + + Sbjct: 181 DTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + ++ + + + Sbjct: 241 EINSKAVSTTDQMLQKLTQ 259 >gi|254785374|ref|YP_003072803.1| flagellar basal body rod protein FlgG [Teredinibacter turnerae T7901] gi|237683455|gb|ACR10719.1| flagellar basal-body rod protein FlgG [Teredinibacter turnerae T7901] Length = 261 Score = 169 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 47/261 (18%), Positives = 94/261 (36%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + +L+TVA+N++N TVGF+ + F +++ I+ Sbjct: 1 MHAALYVSKTGLAAQDTKLTTVANNLANASTVGFKRDRAVFEDLLYQIQRQPGAQNTEDT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 Q + V + GS T LD A++G +F + P G I TR G+F Sbjct: 61 QLPSGLQLGTGVRVVGTQKQFDYGSLQVTNQPLDVAIDGRGFFQILQPDGTIGYTRAGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 +++ G +V +G + V + ++ + Sbjct: 121 HLSNQGEIVDPTGLLLQPAITIPDNAESVTIGTDGTVSARIAGVAAPAILGNIQTVDFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + V++G LE+SN + + EM MI + + Sbjct: 181 PAGLQAIGGNLFLETAASGNPIQGIPGQNGLGQVEQGMLENSNVDIVEEMVNMITTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + ++ ++ + +N+ Sbjct: 241 EMNSKIVSTADQMLQFVTQNL 261 >gi|187926952|ref|YP_001893297.1| flagellar basal-body rod protein FlgG [Ralstonia pickettii 12J] gi|241665281|ref|YP_002983640.1| flagellar basal-body rod protein FlgG [Ralstonia pickettii 12D] gi|187728706|gb|ACD29870.1| flagellar basal-body rod protein FlgG [Ralstonia pickettii 12J] gi|240867308|gb|ACS64968.1| flagellar basal-body rod protein FlgG [Ralstonia pickettii 12D] Length = 260 Score = 169 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 93/259 (35%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + +L +++N++N +T GF+ + F +++ + Sbjct: 1 MIRSLWISKTGMDAQQSQLDVISNNLANVNTTGFKRSRAVFEDLLYQNVREPGAQSSQQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V G+ TG D A+ G+ +F ++ P G TRDG F Sbjct: 61 TLPSGMQIGTGVRIVATERLHTQGNLQQTGNATDVAINGNGFFQVQMPDGTLAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQI-PQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V G LV++SG + + V S + T L + Sbjct: 121 QVNAQGQLVTSSGYPIQPAITVPQNATSFSVGKDGVVTVTTPGSVNNTQVGTFQLANFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + + + ++E SN N + EM MI + + Sbjct: 181 PAGLRSMGENLYAETEASGTANLANPGSNGVGVLNQNYVETSNVNVVEEMVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + + Sbjct: 241 EINSKSVQTSDQMLEKLSQ 259 >gi|170768358|ref|ZP_02902811.1| flagellar basal-body rod protein FlgG [Escherichia albertii TW07627] gi|170123124|gb|EDS92055.1| flagellar basal-body rod protein FlgG [Escherichia albertii TW07627] Length = 260 Score = 169 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 88/259 (33%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M +S I A + + +A+N++N T GF+ + F +++ Sbjct: 1 MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+ T D A++G +F + P TRDG F Sbjct: 61 TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGSSAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V +G LV+A G + + V + + + L + Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQAVPVQVGQLNLTTFMN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + S + + + +G++E SN N E+ MI + + + Sbjct: 181 DTGLESIGENLYSETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + ++ + + + Sbjct: 241 EINSKAVSTTDQMLQKLTQ 259 >gi|114706758|ref|ZP_01439658.1| flagellar basal body rod protein [Fulvimarina pelagi HTCC2506] gi|114537706|gb|EAU40830.1| flagellar basal body rod protein [Fulvimarina pelagi HTCC2506] Length = 240 Score = 169 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 82/243 (33%), Positives = 144/243 (59%), Gaps = 4/243 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M+TS + L+ Q+A+E+RL T+A N++N TVGFR +V+F E++ ++FV+ Sbjct: 1 METSLPVALSGQIAMEKRLETLAHNIANARTVGFRAEEVRFEELLSHT---APDPVAFVS 57 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 G+ YLS + G+ TG LD A+ G+A+FA++ GI+ TRDGR +V+ +G + + +G Sbjct: 58 KGETYLSNKSGALTQTGNPLDLAVRGEAFFAIQGDNGIVYTRDGRMQVSPEGMVQTLTG- 116 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 P+LD +Q+ +G G I Q G+ +A +GL+ + R + SG+ + Sbjct: 117 RPLLDAGGQALQVDPAGGPLTIGGNGMIHQNGQEVAAVGLFRIPQGANVTRADTSGVVSD 176 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 +P TP+ + V +G++E++N N + EM ++I L + F S ++ N++S+ EAI+ Sbjct: 177 VPATPVVEFLTDNVVQGYVEEANVNPVQEMTRLIALQRAFESAANVVQTNDRSLSEAIKA 236 Query: 241 IAS 243 + S Sbjct: 237 LGS 239 >gi|261339378|ref|ZP_05967236.1| flagellar basal-body rod protein FlgG [Enterobacter cancerogenus ATCC 35316] gi|288318179|gb|EFC57117.1| flagellar basal-body rod protein FlgG [Enterobacter cancerogenus ATCC 35316] Length = 260 Score = 169 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 90/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M +S I A + + +A+N++N T GF+ + F +++ Sbjct: 1 MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V G+ T D A++G +F ++ P G TRDG F Sbjct: 61 TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQIQLPDGTSAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V +G LV+A G + + V + + + L + Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + + +G++E SN N E+ MI + + + Sbjct: 181 DTGLESIGENLYTETQSSGTPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + ++ + + + Sbjct: 241 EINSKAVSTTDQMLQKLTQ 259 >gi|56964026|ref|YP_175757.1| flagellar basal body rod protein FlgG [Bacillus clausii KSM-K16] gi|56910269|dbj|BAD64796.1| flagellar hook protein FlgE [Bacillus clausii KSM-K16] Length = 267 Score = 169 bits (427), Expect = 4e-40, Method: Composition-based stats. Identities = 58/264 (21%), Positives = 107/264 (40%), Gaps = 25/264 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--------- 51 M S G++ + +L V +N++N +T GF+ +V F ++V Sbjct: 1 MIRSMYSGISGMKGFQTKLDVVGNNIANVNTHGFKKGRVMFQDMVSQQVQGPMAATPNRG 60 Query: 52 ---IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 Q S G G TG ELD A+ GD +FA++ TR G Sbjct: 61 GVNSKQIGSGSMVGAIDTVHTGGGNQYTGRELDLAINGDGYFAVQIGDDTFYTRAGNIYF 120 Query: 109 TDDGSLVSASGKYPVLDMAS---VPIQIPQKDEIFNVGEKGEIS-----QKGKVIATMGL 160 ++G++V++SG Y + + + + E V ++GEI Q+ V +G+ Sbjct: 121 DNEGNVVNSSGAYLLGPDGNRLQIDPALLDDMESTTVNKQGEIIVSIQGQENPVTLQLGI 180 Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIH 215 + +G S + P + T ++ G+LE SN + E +MI Sbjct: 181 ANFANPEGLNSAGGSLFTATPASGPANLVIPGTQGTGDIQSGYLEMSNVDLADEFSEMIV 240 Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239 + F + + +I +++ + E + Sbjct: 241 AQRGFQANSRIITTSDEILQELVN 264 >gi|295111397|emb|CBL28147.1| flagellar basal-body rod protein FlgG, Gram-negative bacteria [Synergistetes bacterium SGP1] Length = 268 Score = 169 bits (427), Expect = 4e-40, Method: Composition-based stats. Identities = 46/262 (17%), Positives = 89/262 (33%), Gaps = 28/262 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS--- 57 M + + +A + L V+ N++N +T G++ + F +++ + + + Sbjct: 1 MLRALWSSASGMIAQQTNLDVVSHNLANVNTQGYKKRRADFEDLLYQVWREPGTPVEPNS 60 Query: 58 ----------FVASGKEYLSKEVGSFISTGTELDFALEGDA-------WFALESPRGIIL 100 G F T ++D+A+ G + + I Sbjct: 61 TVPTGVQVGLGTRVTATPSFMTQGHFQITDNKMDWAIAGQTMAGENAFFQVTQQDGTIAY 120 Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIP-QKDEIFNVGEKGEISQKGKVIATMG 159 TR G +++ DG +VS G M Q V + + I + Sbjct: 121 TRAGAWEIDGDGQIVSEDGLLLEPAMVVPENATSVQLTRTGRVMVTIPGQTEPQEIGQLE 180 Query: 160 LYSVDMSQGF------VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQM 213 L G + E S I P ++ TV++G LE SN + EM M Sbjct: 181 LARFINPAGLRALGDRLFLETSASGAPIVGQPGQNG-MPTVRQGVLEMSNVQVVEEMVGM 239 Query: 214 IHLTQKFNSITTLIDENEKSML 235 I + + + + I ++ + Sbjct: 240 IIAQRAYEANSKGIQTADELLR 261 >gi|253990125|ref|YP_003041481.1| flagellar basal-body rod protein flgg [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253781575|emb|CAQ84738.1| flagellar basal-body rod protein flgg (distal rod protein) [Photorhabdus asymbiotica] Length = 260 Score = 169 bits (427), Expect = 4e-40, Method: Composition-based stats. Identities = 41/259 (15%), Positives = 82/259 (31%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + + +A+N++N T GF+ + F +++ Sbjct: 1 MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAMSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+ T A+ G +F ++ P TRDG F Sbjct: 61 RLPSGLQIGTGVRPVATERIHSQGNLSGTNNNHHVAIRGKGFFQVQLPDGSSAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 + +G LV+A+G + V K + + + L + Sbjct: 121 QEDQNGQLVTANGFLVFPTITIPDNATDIAISSDGVVSVKVQGQSAPQQVGQFTLTTFIN 180 Query: 166 SQGFVRRENSGISPNIP-----PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + ++ +LE SN N E+ MI + + Sbjct: 181 ENGLESIGENLYVETSSSGVPIENTPGINGAGLLQHKYLETSNVNIAEELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + + Sbjct: 241 EVNSKAVSTSDQMLQKLTQ 259 >gi|283833628|ref|ZP_06353369.1| flagellar basal-body rod protein FlgG [Citrobacter youngae ATCC 29220] gi|291071311|gb|EFE09420.1| flagellar basal-body rod protein FlgG [Citrobacter youngae ATCC 29220] Length = 260 Score = 169 bits (427), Expect = 4e-40, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 89/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M +S I A + + +A+N++N T GF+ + F +++ Sbjct: 1 MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V G+ T D A++G +F + P G TRDG F Sbjct: 61 TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGTSAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V +G LV+A G + + V + + + L + Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGIVSVTQQGQAAPVQVGQLNLTTFMN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + + +G++E SN N E+ MI + + + Sbjct: 181 DTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + ++ + + + Sbjct: 241 EINSKAVSTTDQMLQKLTQ 259 >gi|296102906|ref|YP_003613052.1| flagellar basal body rod protein FlgG [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057365|gb|ADF62103.1| flagellar basal body rod protein FlgG [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 260 Score = 169 bits (427), Expect = 4e-40, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 90/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M +S I A + + +A+N++N T GF+ + F +++ Sbjct: 1 MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V G+ T D A++G +F ++ P G TRDG F Sbjct: 61 TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVQLPDGTSAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V +G LV+A G + + V + + + L + Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + + +G++E SN N E+ MI + + + Sbjct: 181 DTGLESIGENLYTETQSSGTPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + ++ + + + Sbjct: 241 EINSKAVSTTDQMLQKLTQ 259 >gi|110632656|ref|YP_672864.1| flagellar basal body rod protein FlgG [Mesorhizobium sp. BNC1] gi|110283640|gb|ABG61699.1| flagellar basal-body rod protein FlgG [Chelativorans sp. BNC1] Length = 262 Score = 169 bits (427), Expect = 4e-40, Method: Composition-based stats. Identities = 46/262 (17%), Positives = 95/262 (36%), Gaps = 21/262 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----------- 50 + +I A + L +A+N++N +T GF+ + +FS+++ ++ Sbjct: 1 MKALSIAATGMSAQQTNLEVIANNIANINTTGFKRARAEFSDLLYQVERLQGVPERANQN 60 Query: 51 ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 + V + GS +TG +LD AL G WF +E G + +R G F Sbjct: 61 IVPEGANIGLGVKTAAVRNVHVQGSLTNTGNKLDMALVGKGWFQIEGADGEPLYSRAGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE-KGEISQKGKVIATMGLYSVDM 165 G LV+ G + + + + + + + L + Sbjct: 121 NTNATGQLVTVDGFPVTPAITIPADAVEVIVNKSGQVFARIDGQADLQELGQLTLANFSN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G N+ P TV++G+LE SN + + E+ ++I + + Sbjct: 181 EAGLAPIGNNLFRETPASGPATIGVPGDPGFATVEQGYLEASNVDPVKEITELISAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNIA 242 + +I ++ + + Sbjct: 241 EMNSKVITAADEMAATVTQAMR 262 >gi|226944494|ref|YP_002799567.1| flagellar basal-body rod protein [Azotobacter vinelandii DJ] gi|226719421|gb|ACO78592.1| flagellar basal-body rod protein [Azotobacter vinelandii DJ] Length = 260 Score = 169 bits (427), Expect = 4e-40, Method: Composition-based stats. Identities = 40/259 (15%), Positives = 90/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S + + ++ +A+N++N T GF+ + F +++ Sbjct: 1 MIRSLWTAKTGLESQQVQMDVIANNLANVATNGFKRTRAVFEDLLYQNLRQPGADNTTQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+ T D A+ G +F +E P TRDG F Sbjct: 61 KLPSGLQIGTGVRPVATERLHSQGNLQGTENSNDLAINGKGFFQVELPDGTTAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 ++ ++G +V++SG + + + + V + + + + L Sbjct: 121 QLDENGQMVTSSGYLLMGGITIPENALSVTVSQDGIVSVTQPGNAQANQVGQLNLALFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + +G++E SN N + EM MI + + Sbjct: 181 PAGLQSVGENLYLETASSGAPNENIPGTNGAGRLYQGYVETSNVNVVEEMVSMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + ++ +++ + + Sbjct: 241 EINSKAVETSDEMLARLTQ 259 >gi|291288379|ref|YP_003505195.1| flagellar basal-body rod protein FlgG [Denitrovibrio acetiphilus DSM 12809] gi|290885539|gb|ADD69239.1| flagellar basal-body rod protein FlgG [Denitrovibrio acetiphilus DSM 12809] Length = 262 Score = 169 bits (427), Expect = 4e-40, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 90/261 (34%), Gaps = 21/261 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + A + + T+++N++N + +G++ + F +++ Sbjct: 1 MFRTLWTAATGMTAQQTNIDTISNNLANVNNIGYKKSRAHFEDLIYQELKPAGAISAAGM 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q GSF TG LD A+EGD +F P I TR+G Sbjct: 61 THPTGIQVGLGSKVAAIEKVHTQGSFQYTGVSLDIAVEGDGYFQFTLPSGEIAYTRNGSL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165 K DG+LV+++G Y + ++ + I + L Sbjct: 121 KTDADGNLVNSNGYYLEPAVTVPDDVTDIAFGEDGTISVTLAGEEEAQEIGQIELSRFIN 180 Query: 166 SQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + P + ++ + LE SN + + EM MI + + Sbjct: 181 PAGLKAIGKNLFMPTGASGNAVAGVPSEDGYGSITQNTLEMSNVSVVDEMVNMITGQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + + ++ + + + N+ Sbjct: 241 EINSKAVQTGDEML-QIVNNL 260 >gi|160896077|ref|YP_001561659.1| flagellar basal-body rod protein FlgG [Delftia acidovorans SPH-1] gi|160361661|gb|ABX33274.1| flagellar basal-body rod protein FlgG [Delftia acidovorans SPH-1] Length = 260 Score = 169 bits (427), Expect = 4e-40, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 89/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S I A + +L ++ N++N T G++ F +++ + Sbjct: 1 MINSLFISKTGMEAQQTQLDVISHNLANVSTTGYKRASAVFEDLIYQNLRQSGAQTTEQN 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 V + + G+ + LD A++G+ +F + P TRDG F Sbjct: 61 QLPTGLHLGLGVRTVATSRNFLQGALQQSNNALDVAIDGNGFFQVNMPDGTTAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 +V G LV+ASG + V + + + + Sbjct: 121 QVDAQGQLVTASGMPIANGVTIPQGATKVSISPEGVVSVTMAGQAAPQQVGNIAMSQFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G R + + + +K+G+LE SN N + E+ MI + + Sbjct: 181 PAGLEPRGQNLFTETASSGQPQQGQPGVNGMGMIKQGYLEGSNVNVVQELVTMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + I +++ + + + Sbjct: 241 EMNSKAIQTSDQMLAKLAQ 259 >gi|205353083|ref|YP_002226884.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205272864|emb|CAR37793.1| flagellar basal-body rod protein FlgG (distal rod protein) [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326628163|gb|EGE34506.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 260 Score = 169 bits (427), Expect = 4e-40, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 87/259 (33%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M +S I A + + +A+N++N T GF+ + F +++ Sbjct: 1 MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V G+ T D A++G +F + P G TRDG F Sbjct: 61 TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGTSAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V +G LV+A G + + V + + + L + Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + +G++E SN N E+ MI + + + Sbjct: 181 DTGLESIGENLYIETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + ++ + + + Sbjct: 241 EINCKAVSTTDQMLQKLTQ 259 >gi|307627452|gb|ADN71756.1| flagellar basal body rod protein FlgG [Escherichia coli UM146] Length = 260 Score = 169 bits (427), Expect = 4e-40, Method: Composition-based stats. Identities = 42/259 (16%), Positives = 88/259 (33%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M +S I A + + +A+N++N T GF+ + F +++ Sbjct: 1 MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+ T D A++G +F + P TRDG F Sbjct: 61 TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGSSAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V +G LV+A G + + V + + + L + Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + + +G++E SN N E+ MI + + + Sbjct: 181 DTGLESIGENLYTETQSSCAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + ++ + + + Sbjct: 241 EINSKAVSTTDQMLQKLTQ 259 >gi|300716220|ref|YP_003741023.1| flagellar basal-body rod protein [Erwinia billingiae Eb661] gi|299062056|emb|CAX59172.1| Flagellar basal-body rod protein [Erwinia billingiae Eb661] Length = 260 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 42/259 (16%), Positives = 88/259 (33%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + + +++N++N T GF+ + F +++ Sbjct: 1 MIRSLWIAKTGLDAQQTNMDVISNNLANVSTNGFKRQRAVFEDLMYQTIRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V G+ T + D A+ G +F ++ P G TRDG F Sbjct: 61 TLPSGMQLGTGVRPVATERLHTQGNLNKTDSSKDVAISGQGYFQVQMPDGTLAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 + +G LV+ G + + V + + + + L + Sbjct: 121 QTDQNGQLVTNGGFPVQPAITVPANALSMTIGRDGVVSVTQQGQTQPVQVGQLTLSTFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + D + + +G++E SN N E+ MI + + Sbjct: 181 DAGLESKGENLYQETQASGAPTDSTPGNNGAGLLYQGYVETSNVNVAEELVSMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + I +++ + + + Sbjct: 241 EINSKAISTSDQMLAKLTQ 259 >gi|261886055|ref|ZP_06010094.1| flagellar basal body rod protein FlgG [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 262 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 47/261 (18%), Positives = 100/261 (38%), Gaps = 21/261 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S +A + ++ T + N++N +T+G++ + +F++++ Sbjct: 1 MIRSLYTAATGMVAQQTQIDTTSHNIANVNTIGYKKNRAEFADLMYQTMQYAGTPTSTTT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + V G F TG LD + G+ +F ++ P TR+G F Sbjct: 61 MSPTGMEVGLGVRPTAITKVFGQGYFKETGNNLDMVIAGNGFFQIQLPDGTTAYTRNGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 K+ DGS+V++ G + +M + V +Q+ I + L + Sbjct: 121 KLDGDGSIVNSDGYRLLPEMNIPADATQISVGVDGTVSVLQPGNQEMTQIGQIELANFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ +G T +K+GF+E SN + EM +I + + Sbjct: 181 PSGLHAMGDNNFLETAASGAPNIGNGGTDGFGQIKQGFVEMSNVQLVEEMTDLITGQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + + I ++ + + + + Sbjct: 241 EANSKAITTADEML-QTVNQL 260 >gi|290474974|ref|YP_003467858.1| flagellar basal body rod cell-distal protein [Xenorhabdus bovienii SS-2004] gi|289174291|emb|CBJ81081.1| flagellar biosynthesis; cell-distal portion of basal-body rod [Xenorhabdus bovienii SS-2004] Length = 260 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 93/259 (35%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + + +A+N++N T GF+ + F +++ + Sbjct: 1 MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTERQPGAMSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 Q + V G+ T D A++G +F ++ P G TRDG F Sbjct: 61 NLPSGLQIGTGVRPVATERLHSQGNLAQTNNSNDVAIKGQGFFQIQMPDGTTGYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQI-PQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 + +G LV+A G V + V + + + + L + Sbjct: 121 QKDQNGQLVTAGGFQVVPAIIIPDNATKMSIARDGIVSINVQGQNAPQQVGQLTLTTFIN 180 Query: 166 SQGFVRRENSGI-SPNIPPTPLEDLS----GVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + N P+E+ + +G++E SN N E+ MI + + + Sbjct: 181 ESGLESIGENLYLETNSSGVPVENAPGINGAGLLYQGYVETSNVNVAEELVNMIQVQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + + Sbjct: 241 EINSKAVSTSDQMLQKLTQ 259 >gi|218549194|ref|YP_002382985.1| flagellar basal body rod protein FlgG [Escherichia fergusonii ATCC 35469] gi|218356735|emb|CAQ89363.1| flagellar component of cell-distal portion of basal-body rod [Escherichia fergusonii ATCC 35469] gi|324113873|gb|EGC07847.1| flagellar basal-body rod protein FlgG [Escherichia fergusonii B253] gi|325497614|gb|EGC95473.1| flagellar basal body rod protein FlgG [Escherichia fergusonii ECD227] Length = 260 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 42/259 (16%), Positives = 87/259 (33%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M +S I A + + +A+N++N T GF+ + F +++ Sbjct: 1 MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+ T D A++G +F + P TRDG F Sbjct: 61 TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGSSAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V +G LV+A G + + V + + + L + Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + +G++E SN N E+ MI + + + Sbjct: 181 DTGLESIGENLYVETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + ++ + + + Sbjct: 241 EINSKAVSTTDQMLQKLTQ 259 >gi|157146224|ref|YP_001453543.1| flagellar basal body rod protein FlgG [Citrobacter koseri ATCC BAA-895] gi|157083429|gb|ABV13107.1| hypothetical protein CKO_01981 [Citrobacter koseri ATCC BAA-895] Length = 260 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 89/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M +S I A + + +A+N++N T GF+ + F +++ Sbjct: 1 MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V G+ T D A++G +F + P G TRDG F Sbjct: 61 TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGTSAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V +G LV+A G + + V + + + L + Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANSLSITVGRDGVVSVTQQGQAAPVQVGQLNLTTFMN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + + +G++E SN N E+ MI + + + Sbjct: 181 DTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + ++ + + + Sbjct: 241 EINSKAVSTTDQMLQKLTQ 259 >gi|242238971|ref|YP_002987152.1| flagellar basal-body rod protein FlgG [Dickeya dadantii Ech703] gi|242131028|gb|ACS85330.1| flagellar basal-body rod protein FlgG [Dickeya dadantii Ech703] Length = 260 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 42/259 (16%), Positives = 84/259 (32%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + + +++N++N T GF+ + F +++ Sbjct: 1 MIRSLWIAKTGLDAQQTNMDVISNNLANVSTNGFKRQRAVFEDLLYQTVRQPGAQSSDQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+ T D A+ G +F + P TRDG F Sbjct: 61 NLPSGLQLGTGVRPVSTERLHSQGNLEQTENTKDIAINGQGFFEVLMPDGTTAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 ++ +G LV+ASG + Q V + + + L + Sbjct: 121 QLDANGQLVTASGYTVQPAITIPTTAQTMTVARDGTVSVTLQGQTASTQVGQLTLSTFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + +G++E SN N E+ MI + + + Sbjct: 181 PAGLQSLGENLYQETQSSGAPTQSTPGQNGAGVLYQGYVETSNVNVAEELVSMIQVQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + ++ + + Sbjct: 241 EINSKAVSTSDSMLQRLTQ 259 >gi|224532206|ref|ZP_03672838.1| flagellar hook-basal body complex protein [Borrelia valaisiana VS116] gi|224511671|gb|EEF82077.1| flagellar hook-basal body complex protein [Borrelia valaisiana VS116] Length = 282 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 50/280 (17%), Positives = 102/280 (36%), Gaps = 38/280 (13%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51 M + +A ++L V++N++N D VG++ F E++ ND Sbjct: 1 MVRGIYTAASGMMAERRKLDVVSNNLANIDLVGYKKDLSIQKAFPEMLIRRLNDDGLYKF 60 Query: 52 ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101 + + + V + Y E G +TG LD AL +F +++ G T Sbjct: 61 PKGHLETAPIVGKLGTGVEENEIYTLFEQGPLKTTGNPLDLALTDQGFFVIQTSDGERYT 120 Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV------- 154 R+G F + +G LV+ SG + + + ++ S + Sbjct: 121 RNGSFTIGKEGILVTKSGFPVLGEKGYIYLKKNNFKITPQGQIFHNSSFESNPKRLVSEY 180 Query: 155 ---------IATMGLYSVDMSQGFVRRENSGIS---PNIPPTPLEDLSGVTVKRGFLEDS 202 + T+ + + + + ++ NS + ++ ++ LE S Sbjct: 181 ENSWENYELLDTIRIVNFENPRFLKKQGNSLWIDTKTSGKAQEMDISLRPKIETETLEAS 240 Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 N N + EM MI + + + + I + + + I I Sbjct: 241 NVNPVKEMVLMIEINRAYEANQKTIQTEDNLLGKLINEIG 280 >gi|146307867|ref|YP_001188332.1| flagellar basal body rod protein FlgG [Pseudomonas mendocina ymp] gi|145576068|gb|ABP85600.1| flagellar basal-body rod protein FlgG [Pseudomonas mendocina ymp] Length = 261 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 48/261 (18%), Positives = 98/261 (37%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + L+T+++N++N T GF+ + +F +++ I+ Sbjct: 1 MLPALWVSKTGLSAQDMNLTTISNNLANVATTGFKRDRAEFEDLLYQIRRQPGGQSSQDS 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 Q + V GS +T LD A+ G +F + P G + TRDG F Sbjct: 61 ELPSGLQLGTGVRVVGTQKIFTAGSLQTTEQPLDMAINGRGFFQILQPDGTVSYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 + DG +V++ G + + E V + + ++I + L Sbjct: 121 HLNSDGQIVTSQGFALEPAIVLPNEVRTFTVGEDGTVSVTTAGNPQPQIIGNIQLADFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G N+ + + T + LE+SN + + E+ MI + + Sbjct: 181 PAGLEAIGNNLFLETGSSGAPQVGNPGLNGLGTTLQNTLENSNVSVVEELVNMITTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + +I ++ + +N+ Sbjct: 241 EMNSKVISTADQMLSFVTQNL 261 >gi|218689031|ref|YP_002397243.1| flagellar basal body rod protein FlgG [Escherichia coli ED1a] gi|218426595|emb|CAR07423.1| flagellar component of cell-distal portion of basal-body rod [Escherichia coli ED1a] Length = 260 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 42/259 (16%), Positives = 88/259 (33%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M +S I A + + +A+N++N T GF+ + F +++ Sbjct: 1 MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+ T D A++G +F + P TRDG F Sbjct: 61 TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGSSAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V +G LV+A G + + V + + + L + Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + + +G++E SN N E+ MI + + + Sbjct: 181 DTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVEMSNVNVAEELVNMIQVQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + ++ + + + Sbjct: 241 EINSKAVSTTDQMLQKLTQ 259 >gi|51246533|ref|YP_066417.1| flagellar hook basal body protein (FlgG) [Desulfotalea psychrophila LSv54] gi|50877570|emb|CAG37410.1| probable flagellar hook basal body protein (FlgG) [Desulfotalea psychrophila LSv54] Length = 261 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 51/262 (19%), Positives = 95/262 (36%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S G A + + +A+N++N +T GF+ F +++ + Sbjct: 1 MFRSLWTGTTGMQAQQLNIDIIANNLANVNTTGFKKSSADFQDLLYQTMKVPGSQTSPDT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 V G I T ELD A++G +F +E+P I TR G F Sbjct: 61 ESPTGILVGLGVKPAAVTKVFTQGDLIQTENELDVAIQGRGFFQIEAPDGNIKYTRAGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVP-IQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 K +G + S+ G + ++ + E V K + I T+ L Sbjct: 121 KRDSNGRMTSSDGYPLIPEITIPSGAKQVSIGETGIVSVKLDSDSTETEIGTIELAGFTN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + T+ + +LE SN N + EM MI + + Sbjct: 181 PAGLAAIGKNLFEETGASGTATIGIPGEEGYGTLIQQYLEGSNVNLVAEMAAMISTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNIA 242 ++++ +++ M + + ++A Sbjct: 241 EINSSMVKTSDQMM-QTVNDLA 261 >gi|203284669|ref|YP_002222409.1| flagellar hook-basal body complex protein [Borrelia duttonii Ly] gi|201084112|gb|ACH93703.1| flagellar hook-basal body complex protein [Borrelia duttonii Ly] Length = 282 Score = 168 bits (426), Expect = 5e-40, Method: Composition-based stats. Identities = 50/280 (17%), Positives = 102/280 (36%), Gaps = 38/280 (13%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKND------ 51 M + +A RL +A+N++N D G++ F E++ ND Sbjct: 1 MVRGIYTAASGMIAQRHRLEVIANNLANIDLTGYKKDLSVQKAFPEMLIRRTNDDGLYKF 60 Query: 52 ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101 + + + V + Y S E G TG LD AL + +F +++P G T Sbjct: 61 PKGYLETAPVVGKLGTGVEENEIYTSFEQGPLKITGNPLDLALTEEGFFVVQTPEGERYT 120 Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV------- 154 R+G F + +G L++ G + + + I+ + + Sbjct: 121 RNGSFTLGREGILITKDGYPVIGEKGYIHIKDNNFKITEQGQIFHNSTFESNPKRLVSES 180 Query: 155 ---------IATMGLYSVDMSQGFVRRENSGISPNI---PPTPLEDLSGVTVKRGFLEDS 202 + + + + + ++ ++ +S + S ++ G LE S Sbjct: 181 ENSWENYELLDNLKIVNFEKARFLKKQGSSLWYSTEISGQAKNIPINSRPKIESGVLECS 240 Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 N N++ EM MI + + + + I + + + I I Sbjct: 241 NVNAINEMVSMITVNRVYEANQKTIQTEDTLLGKLINEIG 280 >gi|86356312|ref|YP_468204.1| flagellar basal body rod protein FlgG [Rhizobium etli CFN 42] gi|86280414|gb|ABC89477.1| flagellar basal-body rod protein [Rhizobium etli CFN 42] Length = 262 Score = 168 bits (426), Expect = 5e-40, Method: Composition-based stats. Identities = 44/261 (16%), Positives = 91/261 (34%), Gaps = 21/261 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----------- 50 + I A + L +A+N++N +T GF+ + +F++++ + Sbjct: 1 MRALAIAATGMDAQQTNLEVIANNIANINTTGFKRARAEFTDLLYQTERAKGVANRANQA 60 Query: 51 ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRF 106 + V + G TG +LD AL G +F ++ + + TR G F Sbjct: 61 VVPEGANIGLGVQTSAVRNLHLQGELTQTGNDLDVALIGKGFFQIQSTDGTTLYTRAGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 D G LV+ G + + V K V+ + L Sbjct: 121 NKNDQGQLVTIDGYEVLPGITIPQGSTELTISRSGEVSAKLPGQTDPTVLGQLTLADFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ + +K+G+LE SN + + E+ ++I + + Sbjct: 181 EAGLQPIGDNLFQETPASGEAVVGNPDEEGFAYMKQGYLESSNVDPVKEITELISAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + +I ++ +N+ Sbjct: 241 EMNSKVITTADEMASIVSKNL 261 >gi|13472576|ref|NP_104143.1| flagellar basal body rod protein FlgG [Mesorhizobium loti MAFF303099] gi|14023322|dbj|BAB49929.1| flagellar basal body distal rod protein; FlgG [Mesorhizobium loti MAFF303099] Length = 262 Score = 168 bits (426), Expect = 5e-40, Method: Composition-based stats. Identities = 44/262 (16%), Positives = 91/262 (34%), Gaps = 21/262 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + I A + L +A+N++N +T G++ + +FS+++ + Sbjct: 1 MKALAIAATGMNAQQTNLEVIANNIANINTTGYKRARAEFSDLLYQVDRTQGVPNRSNAS 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRF 106 V + G STG D AL G WF +E + G + TR G F Sbjct: 61 LVPEGVSIGLGVKTTAVRNVHTQGELTSTGNSFDMALTGRGWFQIEGADGGTLYTRAGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE-KGEISQKGKVIATMGLYSVDM 165 G LV+ G + + + + + + + + + + Sbjct: 121 NTNATGQLVTVDGANVIPAITVPTDAVEVIVNKTGQVFARIDGQTNLQTLGQLQIVNFAN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ P T+++G+LE SN + + E+ ++I + + Sbjct: 181 EAGLAPLGDNLFQETTASGPANAGVPGDPGFATIQQGYLEASNVDPVKEITELISAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNIA 242 + +I + +NI Sbjct: 241 EMNSKVIQAADDMASVVSKNIR 262 >gi|323703191|ref|ZP_08114844.1| fagellar hook-basal body protein [Desulfotomaculum nigrificans DSM 574] gi|323531850|gb|EGB21736.1| fagellar hook-basal body protein [Desulfotomaculum nigrificans DSM 574] Length = 260 Score = 168 bits (426), Expect = 5e-40, Method: Composition-based stats. Identities = 52/258 (20%), Positives = 104/258 (40%), Gaps = 18/258 (6%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + G + A + +L T+ +N++N +T ++ +++F+E++ D Sbjct: 3 IKTLATGASGMRAFQMKLDTIGNNIANINTTAYKRSRIEFAEMMRQAMGDQGIPAASDPR 62 Query: 54 -QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR--GIILTRDGRFKVTD 110 S V E G + TG +LD A+EG+ +F + SP TRDG F + + Sbjct: 63 PAGGSGVKMVSVARLVEQGDLLQTGRDLDLAIEGEGYFKVISPEDDREYYTRDGCFYLNN 122 Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-IATMGLYSVDMSQGF 169 +G +V+A+G ++ +G+ ++ I + LY+ Sbjct: 123 EGVVVNANGYKLEPEINLKDGNYVAIRIDEKGKVQGKTAEGDFQDIDEITLYTFPAPANL 182 Query: 170 VRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224 + N+ SP + + +++G+LE SN + EM MI + + + Sbjct: 183 LDEGNNLYSPTTASGEATEGTPGEDGVGLIRQGYLERSNVDLAQEMLGMIEAQRAYAANA 242 Query: 225 TLIDENEKSMLEAIRNIA 242 I ++ A N+ Sbjct: 243 RTIQTADEMWDRA-NNLR 259 >gi|332342624|gb|AEE55958.1| flagellar basal-body rod protein FlgG [Escherichia coli UMNK88] Length = 260 Score = 168 bits (425), Expect = 5e-40, Method: Composition-based stats. Identities = 42/259 (16%), Positives = 88/259 (33%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M +S I A + + +A+N++N T GF+ + F +++ Sbjct: 1 MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+ T D A++G +F + P TRDG F Sbjct: 61 TLPSGLQIGTGVRPVTTERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGSSAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V +G LV+A G + + V + + + L + Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + + +G++E SN N E+ MI + + + Sbjct: 181 DTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + ++ + + + Sbjct: 241 EINSKAVSTTDQMLQKLTQ 259 >gi|111115607|ref|YP_710225.1| flagellar hook-basal body complex protein [Borrelia afzelii PKo] gi|216263707|ref|ZP_03435702.1| flagellar hook-basal body complex protein [Borrelia afzelii ACA-1] gi|110890881|gb|ABH02049.1| flagellar hook-basal body complex protein [Borrelia afzelii PKo] gi|215980551|gb|EEC21372.1| flagellar hook-basal body complex protein [Borrelia afzelii ACA-1] Length = 282 Score = 168 bits (425), Expect = 5e-40, Method: Composition-based stats. Identities = 48/280 (17%), Positives = 104/280 (37%), Gaps = 38/280 (13%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51 M + +A ++L V++N++N D +G++ F E++ ND Sbjct: 1 MVRGIYTAASGMMAERRKLDVVSNNLANIDLIGYKKDLSIQKAFPEMLIRRLNDDGLYKF 60 Query: 52 ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101 + + + V + Y E G +TG LD AL +F +++ G T Sbjct: 61 PKGHLETAPIVGKLGTGVEENEIYTLFEQGPLKTTGNPLDLALTDQGFFVIQTSDGERYT 120 Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI------------- 148 R+G F + +G LV+ SG + + + ++ Sbjct: 121 RNGSFTIGKEGILVTKSGFPVLGEKGYIYLKKNNFKITPQGQIFHNSNFESNPRRLVSEH 180 Query: 149 ---SQKGKVIATMGLYSVDMSQGFVRRENSGIS---PNIPPTPLEDLSGVTVKRGFLEDS 202 + +++ T+ + + + + ++ NS + ++ ++ LE S Sbjct: 181 ENSWENYELLDTIRIVNFENPRFLKKQGNSLWIDTKTSGKAQEIDVSLRPKIETEALEAS 240 Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 N N++ EM MI + + + + I + + + I I Sbjct: 241 NVNAVKEMVLMIEINRAYEANQKTIQTEDSLLGKLINEIG 280 >gi|330721006|gb|EGG99167.1| Flagellar basal-body rod protein FlgG [gamma proteobacterium IMCC2047] Length = 261 Score = 168 bits (425), Expect = 5e-40, Method: Composition-based stats. Identities = 48/261 (18%), Positives = 94/261 (36%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A +Q L+++++N++N T G++ + F +++ + Sbjct: 1 MLASLWISKTGLSAQDQALASISNNLANVSTTGYKRERAVFQDLLYPVHTQPGAQSSQST 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 Q + V + GS T LD A+ G +F + P G RDG+F Sbjct: 61 QLPSGLQTGTGVKTVATQKLHTNGSLEVTDQPLDIAINGRGYFQVLLPDGETGYARDGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQKGKVIATMGLYSVDM 165 ++ DG +V++ G + + V S I + L Sbjct: 121 QLNSDGVIVNSQGFELQPSITVPANTLNITIGSDGVISATVAGSSTPTQIGDIQLAEFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + T+++G LE+SN N + E+ MI + + Sbjct: 181 PTGLQAIGGNLYKETAASGTPTTGTPGLSGRGTIEQGVLENSNVNIVEELVDMITTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 T +I +++ + +++ Sbjct: 241 EMNTKVISTSDQMLQFVTQSL 261 >gi|34498338|ref|NP_902553.1| flagellar basal-body rod protein FlgG [Chromobacterium violaceum ATCC 12472] gi|34104192|gb|AAQ60551.1| flagellar basal-body rod protein FlgG [Chromobacterium violaceum ATCC 12472] Length = 260 Score = 168 bits (425), Expect = 6e-40, Method: Composition-based stats. Identities = 49/259 (18%), Positives = 92/259 (35%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + I + +L V++N++N +TVGF+ + F ++ Sbjct: 1 MMRALYIAKTGMDTSQFQLDVVSNNLANVNTVGFKKSRGIFEDLYYQTLRQPGGQLANGN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + A+ G TG LD ++GD +F L P +R+G+F Sbjct: 61 ANPTGLQVGTGAAAVASSRIFTQGPPQQTGQPLDLQIQGDGFFRLLQPDGTTAYSRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165 + +G++V+ G ++ V + S + T+ L + Sbjct: 121 QRDANGNVVNPDGLPLNPNINIPATAQQITVSSAGVVQYTLAGSAAPQTAGTILLTTFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 QG N+ +D + +K GFLE SN N E+ MI + F Sbjct: 181 PQGLQSIGNNLYLQTAASGDPQDGNPQTDDRGAIKSGFLESSNVNVTEELVNMITAQRSF 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + ++ + + Sbjct: 241 EMNSRAVTTADQMLQKLSN 259 >gi|253998486|ref|YP_003050549.1| flagellar basal-body rod protein FlgG [Methylovorus sp. SIP3-4] gi|313200561|ref|YP_004039219.1| flagellar basal-body rod protein flgg [Methylovorus sp. MP688] gi|253985165|gb|ACT50022.1| flagellar basal-body rod protein FlgG [Methylovorus sp. SIP3-4] gi|312439877|gb|ADQ83983.1| flagellar basal-body rod protein FlgG [Methylovorus sp. MP688] Length = 260 Score = 168 bits (425), Expect = 6e-40, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 87/259 (33%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + ++ +A+N++N T GF+ + F +++ Sbjct: 1 MIRSLWISKTGLDAQQTQMDVIANNLANVSTNGFKRSRAVFEDLLYQNIRQPGAQSSQQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+ T D A+ G+ +F + P TRDG F Sbjct: 61 QLPSGMQLGTGVKPVATERIFSQGNLQQTENAKDLAINGEGFFQVLLPDGSTAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V + G +V+ASG + V S I T+ L + Sbjct: 121 QVDNQGQMVTASGYTIQPAITIPANAQSITVGRDGTVSVTLPNSVATTQIGTIQLATFIN 180 Query: 166 SQGFVRRENSGISP-----NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + +G++E SN N + E+ MI + + Sbjct: 181 PAGLQSKGENLYVETSASGTASTNTPGANGAGVLNQGYVETSNVNVVEELVSMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + I +++ + + Sbjct: 241 EINSKAITTSDQMLQRLSQ 259 >gi|302037628|ref|YP_003797950.1| flagellar basal-body rod protein FlgG [Candidatus Nitrospira defluvii] gi|300605692|emb|CBK42025.1| Flagellar basal-body rod protein FlgG [Candidatus Nitrospira defluvii] Length = 263 Score = 168 bits (425), Expect = 6e-40, Method: Composition-based stats. Identities = 52/263 (19%), Positives = 100/263 (38%), Gaps = 22/263 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + A + + T+A+N++N +T F+ + +F +++ I+ S V Sbjct: 1 MIRAMWTAATGMTAQQLNVDTIANNLANVNTNAFKRSRAEFGDLLYQIQRLPGTNASNVG 60 Query: 61 SGKEYL-------------SKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + G+ TG +LD A++G +F + P I+ TR+G F Sbjct: 61 VFPVGVQVGGGVRPITVAKEWVQGNMRQTGNDLDLAIDGAGFFQVTRPDGTIMYTRNGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 K + G+LV+ G + + + V + + + L D Sbjct: 121 KRDNVGNLVTGDGDQLNPVITIPSGALKIDVGQDGTVSVLLPGVTQASQVGQIQLVRFDN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT------VKRGFLEDSNANSMYEMGQMIHLTQK 219 G V + + P + +G +++GFLE SN N EM MI + Sbjct: 181 PSGLVAMGGNLFLDSFASGPAQQGTGGFSTGFGTLQQGFLESSNVNLAEEMVNMIIAQRS 240 Query: 220 FNSITTLIDENEKSMLEAIRNIA 242 + + I +++ M + N+ Sbjct: 241 YEINSKTIQASDEMM-QIANNLR 262 >gi|190890363|ref|YP_001976905.1| flagellar basal-body rod protein [Rhizobium etli CIAT 652] gi|218516082|ref|ZP_03512922.1| flagellar basal body rod protein FlgG [Rhizobium etli 8C-3] gi|190695642|gb|ACE89727.1| flagellar basal-body rod protein [Rhizobium etli CIAT 652] Length = 262 Score = 168 bits (425), Expect = 6e-40, Method: Composition-based stats. Identities = 44/261 (16%), Positives = 92/261 (35%), Gaps = 21/261 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----------- 50 + I A + L +A+N++N +T GF+ + +F++++ + Sbjct: 1 MRALAIAATGMDAQQTNLEVIANNIANINTTGFKRARAEFTDLLYQTERAKGVANRANQA 60 Query: 51 ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRF 106 + V + G TG +LD AL G +F ++ + + TR G F Sbjct: 61 VVPEGANIGLGVQTSAVRNLHLQGELTQTGNDLDVALIGKGFFQIQSTDGTTLYTRAGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 D G LV+ G + + V K + V+ + L Sbjct: 121 NKNDQGQLVTVDGYEVLPGITIPTGSTELTISRSGEVSVKLPGATDTTVLGQLTLADFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ + +K+G+LE SN + + E+ ++I + + Sbjct: 181 EAGLQPIGDNLFQETAASGEAVVGNPDEEGFAYMKQGYLESSNVDPVKEITELISAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + +I ++ +N+ Sbjct: 241 EMNSKVITTADEMASIVSKNL 261 >gi|261344140|ref|ZP_05971784.1| flagellar basal-body rod protein FlgG [Providencia rustigianii DSM 4541] gi|282567732|gb|EFB73267.1| flagellar basal-body rod protein FlgG [Providencia rustigianii DSM 4541] Length = 260 Score = 168 bits (425), Expect = 6e-40, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 88/259 (33%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + L +++N++N T GF+ + F +++ Sbjct: 1 MIRSLWIAKTGLDAQQTNLDVISNNLANVSTNGFKRQRAVFEDLLYQNIRQPGAMSSDQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + G+ TGT D A++G + ++ P G TRDG Sbjct: 61 SLPSGLQMGTGARPVATMRIHSQGNLNKTGTTTDIAIKGQGFLHVQMPDGTDAYTRDGAL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 + DG LV++SG V + V + + I + L + Sbjct: 121 QPNQDGQLVTSSGYQVVPAIMIPENANSLSIARDGTVSVTVYGDNQPQQIGQITLTTFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + ++ + T + +G LE SN N E+ MI + + Sbjct: 181 DAGLESMGENLYMETASSGAPKESAPGTNGAGLLYQGMLETSNVNVAEELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + Sbjct: 241 EINSKAVSASDQMLQRLTQ 259 >gi|209547928|ref|YP_002279845.1| flagellar basal body rod protein FlgG [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209533684|gb|ACI53619.1| flagellar basal-body rod protein FlgG [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 262 Score = 168 bits (425), Expect = 6e-40, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 92/261 (35%), Gaps = 21/261 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----------- 50 + I A + L +A+N++N +T GF+ + +FS+++ + Sbjct: 1 MRALAIAATGMDAQQTNLEVIANNIANINTTGFKRARAEFSDLLYQTERAKGVANRANQA 60 Query: 51 ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRF 106 + V + G TG +LD AL G +F ++ + + TR G F Sbjct: 61 VVPEGANIGLGVQTSAVRNLHLQGELTQTGNDLDVALIGKGFFQIQSTDGTTLYTRAGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 D G LV+ G + + V K + V+ + L Sbjct: 121 NKNDQGQLVTIDGYEVLPGITIPTGSTELTISRSGQVSAKLPGAADATVLGQLTLADFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ + +K+G+LE SN + + E+ ++I + + Sbjct: 181 EAGLQPLGDNLFQETAASGEAVVGNPDEEGFAYMKQGYLESSNVDPVKEITELISAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + +I ++ +N+ Sbjct: 241 EMNSKVITTADEMASIVSKNL 261 >gi|15801195|ref|NP_287212.1| flagellar basal body rod protein FlgG [Escherichia coli O157:H7 EDL933] gi|15830710|ref|NP_309483.1| flagellar basal body rod protein FlgG [Escherichia coli O157:H7 str. Sakai] gi|16129041|ref|NP_415596.1| flagellar component of cell-distal portion of basal-body rod [Escherichia coli str. K-12 substr. MG1655] gi|26247218|ref|NP_753258.1| flagellar basal body rod protein FlgG [Escherichia coli CFT073] gi|89107924|ref|AP_001704.1| flagellar component of cell-distal portion of basal-body rod [Escherichia coli str. K-12 substr. W3110] gi|91210230|ref|YP_540216.1| flagellar basal body rod protein FlgG [Escherichia coli UTI89] gi|110641254|ref|YP_668984.1| flagellar basal body rod protein FlgG [Escherichia coli 536] gi|110805095|ref|YP_688615.1| flagellar basal body rod protein FlgG [Shigella flexneri 5 str. 8401] gi|117623264|ref|YP_852177.1| flagellar basal body rod protein FlgG [Escherichia coli APEC O1] gi|157156521|ref|YP_001462312.1| flagellar basal body rod protein FlgG [Escherichia coli E24377A] gi|168747146|ref|ZP_02772168.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7 str. EC4113] gi|168758629|ref|ZP_02783636.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7 str. EC4401] gi|168764490|ref|ZP_02789497.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7 str. EC4501] gi|168767737|ref|ZP_02792744.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7 str. EC4486] gi|168773923|ref|ZP_02798930.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7 str. EC4196] gi|168783608|ref|ZP_02808615.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7 str. EC4076] gi|168790013|ref|ZP_02815020.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7 str. EC869] gi|168802023|ref|ZP_02827030.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7 str. EC508] gi|170080729|ref|YP_001730049.1| flagellar component of cell-distal portion of basal-body rod [Escherichia coli str. K-12 substr. DH10B] gi|170679890|ref|YP_001744102.1| flagellar basal body rod protein FlgG [Escherichia coli SMS-3-5] gi|188492805|ref|ZP_03000075.1| flagellar basal-body rod protein FlgG [Escherichia coli 53638] gi|191168453|ref|ZP_03030241.1| flagellar basal-body rod protein FlgG [Escherichia coli B7A] gi|191172450|ref|ZP_03033991.1| flagellar basal-body rod protein FlgG [Escherichia coli F11] gi|193064556|ref|ZP_03045636.1| flagellar basal-body rod protein FlgG [Escherichia coli E22] gi|193069501|ref|ZP_03050455.1| flagellar basal-body rod protein FlgG [Escherichia coli E110019] gi|194438123|ref|ZP_03070216.1| flagellar basal-body rod protein FlgG [Escherichia coli 101-1] gi|195935468|ref|ZP_03080850.1| flagellar basal body rod protein FlgG [Escherichia coli O157:H7 str. EC4024] gi|208806632|ref|ZP_03248969.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7 str. EC4206] gi|208815071|ref|ZP_03256250.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7 str. EC4045] gi|208822750|ref|ZP_03263069.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7 str. EC4042] gi|209399139|ref|YP_002269924.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7 str. EC4115] gi|209918332|ref|YP_002292416.1| flagellar basal body rod protein FlgG [Escherichia coli SE11] gi|215486287|ref|YP_002328718.1| flagellar basal body rod protein FlgG [Escherichia coli O127:H6 str. E2348/69] gi|217328263|ref|ZP_03444345.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7 str. TW14588] gi|218553656|ref|YP_002386569.1| flagellar basal body rod protein FlgG [Escherichia coli IAI1] gi|218557960|ref|YP_002390873.1| flagellar basal body rod protein FlgG [Escherichia coli S88] gi|218694612|ref|YP_002402279.1| flagellar basal body rod protein FlgG [Escherichia coli 55989] gi|218700419|ref|YP_002408048.1| flagellar basal body rod protein FlgG [Escherichia coli IAI39] gi|218704486|ref|YP_002412005.1| flagellar basal body rod protein FlgG [Escherichia coli UMN026] gi|227886564|ref|ZP_04004369.1| flagellar basal body rod protein FlgG [Escherichia coli 83972] gi|237706936|ref|ZP_04537417.1| flagellar basal-body rod protein flgG [Escherichia sp. 3_2_53FAA] gi|238900332|ref|YP_002926128.1| flagellar component of cell-distal portion of basal-body rod [Escherichia coli BW2952] gi|253773898|ref|YP_003036729.1| flagellar basal body rod protein FlgG [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254161184|ref|YP_003044292.1| flagellar basal body rod protein FlgG [Escherichia coli B str. REL606] gi|254792460|ref|YP_003077297.1| flagellar basal body rod protein FlgG [Escherichia coli O157:H7 str. TW14359] gi|256018665|ref|ZP_05432530.1| flagellar basal body rod protein FlgG [Shigella sp. D9] gi|256023224|ref|ZP_05437089.1| flagellar basal body rod protein FlgG [Escherichia sp. 4_1_40B] gi|260843318|ref|YP_003221096.1| flagellar component FlgG of cell-distal portion of basal-body rod [Escherichia coli O103:H2 str. 12009] gi|260854561|ref|YP_003228452.1| flagellar component FlgG of cell-distal portion of basal-body rod [Escherichia coli O26:H11 str. 11368] gi|260867441|ref|YP_003233843.1| flagellar component FlgG of cell-distal portion of basal-body rod [Escherichia coli O111:H- str. 11128] gi|261227017|ref|ZP_05941298.1| flagellar component of cell-distal portion of basal-body rod [Escherichia coli O157:H7 str. FRIK2000] gi|261256251|ref|ZP_05948784.1| flagellar component FlgG of cell-distal portion of basal-body rod [Escherichia coli O157:H7 str. FRIK966] gi|291282098|ref|YP_003498916.1| Flagellar basal-body rod protein flgG [Escherichia coli O55:H7 str. CB9615] gi|293404362|ref|ZP_06648356.1| flagellar basal-body rod protein flgG [Escherichia coli FVEC1412] gi|293409444|ref|ZP_06653020.1| flagellar basal-body rod protein FlgG [Escherichia coli B354] gi|293433368|ref|ZP_06661796.1| flagellar basal-body rod protein FlgG [Escherichia coli B088] gi|297516691|ref|ZP_06935077.1| flagellar basal body rod protein FlgG [Escherichia coli OP50] gi|298380142|ref|ZP_06989747.1| flagellar basal-body rod protein flgG [Escherichia coli FVEC1302] gi|300816780|ref|ZP_07097000.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 107-1] gi|300821141|ref|ZP_07101290.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 119-7] gi|300899597|ref|ZP_07117836.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 198-1] gi|300902469|ref|ZP_07120451.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 84-1] gi|300918680|ref|ZP_07135261.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 115-1] gi|300922604|ref|ZP_07138704.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 182-1] gi|300928370|ref|ZP_07143904.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 187-1] gi|300938643|ref|ZP_07153372.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 21-1] gi|300950173|ref|ZP_07164118.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 116-1] gi|300954382|ref|ZP_07166836.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 175-1] gi|300974382|ref|ZP_07172594.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 45-1] gi|300982619|ref|ZP_07176203.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 200-1] gi|301023265|ref|ZP_07187062.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 69-1] gi|301029707|ref|ZP_07192761.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 196-1] gi|301051138|ref|ZP_07197968.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 185-1] gi|301304983|ref|ZP_07211085.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 124-1] gi|301328552|ref|ZP_07221613.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 78-1] gi|301644990|ref|ZP_07244956.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 146-1] gi|306814073|ref|ZP_07448246.1| flagellar basal body rod protein FlgG [Escherichia coli NC101] gi|307137713|ref|ZP_07497069.1| flagellar basal body rod protein FlgG [Escherichia coli H736] gi|307310144|ref|ZP_07589794.1| flagellar basal-body rod protein FlgG [Escherichia coli W] gi|309798072|ref|ZP_07692447.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 145-7] gi|312968848|ref|ZP_07783055.1| flagellar basal-body rod protein FlgG [Escherichia coli 2362-75] gi|331641622|ref|ZP_08342757.1| flagellar basal-body rod protein FlgG [Escherichia coli H736] gi|331646336|ref|ZP_08347439.1| flagellar basal-body rod protein FlgG [Escherichia coli M605] gi|331657140|ref|ZP_08358102.1| flagellar basal-body rod protein FlgG [Escherichia coli TA206] gi|331662484|ref|ZP_08363407.1| flagellar basal-body rod protein FlgG [Escherichia coli TA143] gi|331667478|ref|ZP_08368342.1| flagellar basal-body rod protein FlgG [Escherichia coli TA271] gi|331672598|ref|ZP_08373387.1| flagellar basal-body rod protein FlgG [Escherichia coli TA280] gi|331676869|ref|ZP_08377565.1| flagellar basal-body rod protein FlgG [Escherichia coli H591] gi|331682580|ref|ZP_08383199.1| flagellar basal-body rod protein FlgG [Escherichia coli H299] gi|332279734|ref|ZP_08392147.1| flagellar basal-body rod protein FlgG [Shigella sp. D9] gi|78100014|sp|P0ABX7|FLGG_ECO57 RecName: Full=Flagellar basal-body rod protein flgG; AltName: Full=Distal rod protein gi|78100015|sp|P0ABX6|FLGG_ECOL6 RecName: Full=Flagellar basal-body rod protein flgG; AltName: Full=Distal rod protein gi|78100016|sp|P0ABX5|FLGG_ECOLI RecName: Full=Flagellar basal-body rod protein flgG; AltName: Full=Distal rod protein gi|12514619|gb|AAG55824.1|AE005318_1 flagellar biosynthesis, cell-distal portion of basal-body rod [Escherichia coli O157:H7 str. EDL933] gi|26107619|gb|AAN79818.1|AE016759_92 Flagellar basal-body rod protein flgG [Escherichia coli CFT073] gi|1787318|gb|AAC74162.1| flagellar component of cell-distal portion of basal-body rod [Escherichia coli str. K-12 substr. MG1655] gi|4062656|dbj|BAA35887.1| flagellar component of cell-distal portion of basal-body rod [Escherichia coli str. K12 substr. W3110] gi|13360920|dbj|BAB34879.1| flagellar basal body rod protein flgG [Escherichia coli O157:H7 str. Sakai] gi|91071804|gb|ABE06685.1| flagellar basal body rod protein FlgG [Escherichia coli UTI89] gi|110342846|gb|ABG69083.1| flagellar basal-body rod protein FlgG [Escherichia coli 536] gi|110614643|gb|ABF03310.1| flagellar basal-body rod protein FlgG [Shigella flexneri 5 str. 8401] gi|115512388|gb|ABJ00463.1| flagellar basal-body rod protein FlgG [Escherichia coli APEC O1] gi|157078551|gb|ABV18259.1| flagellar basal-body rod protein FlgG [Escherichia coli E24377A] gi|169888564|gb|ACB02271.1| flagellar component of cell-distal portion of basal-body rod [Escherichia coli str. K-12 substr. DH10B] gi|170517608|gb|ACB15786.1| flagellar basal-body rod protein FlgG [Escherichia coli SMS-3-5] gi|187770380|gb|EDU34224.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7 str. EC4196] gi|188018193|gb|EDU56315.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7 str. EC4113] gi|188488004|gb|EDU63107.1| flagellar basal-body rod protein FlgG [Escherichia coli 53638] gi|188999095|gb|EDU68081.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7 str. EC4076] gi|189354587|gb|EDU73006.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7 str. EC4401] gi|189363057|gb|EDU81476.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7 str. EC4486] gi|189365523|gb|EDU83939.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7 str. EC4501] gi|189370495|gb|EDU88911.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7 str. EC869] gi|189375944|gb|EDU94360.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7 str. EC508] gi|190901472|gb|EDV61233.1| flagellar basal-body rod protein FlgG [Escherichia coli B7A] gi|190907334|gb|EDV66932.1| flagellar basal-body rod protein FlgG [Escherichia coli F11] gi|192927808|gb|EDV82422.1| flagellar basal-body rod protein FlgG [Escherichia coli E22] gi|192957249|gb|EDV87698.1| flagellar basal-body rod protein FlgG [Escherichia coli E110019] gi|194423059|gb|EDX39053.1| flagellar basal-body rod protein FlgG [Escherichia coli 101-1] gi|208726433|gb|EDZ76034.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7 str. EC4206] gi|208731719|gb|EDZ80407.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7 str. EC4045] gi|208738235|gb|EDZ85918.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7 str. EC4042] gi|209160539|gb|ACI37972.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7 str. EC4115] gi|209773358|gb|ACI84991.1| flagellar basal body rod protein flgG [Escherichia coli] gi|209773360|gb|ACI84992.1| flagellar basal body rod protein flgG [Escherichia coli] gi|209773362|gb|ACI84993.1| flagellar basal body rod protein flgG [Escherichia coli] gi|209773364|gb|ACI84994.1| flagellar basal body rod protein flgG [Escherichia coli] gi|209773366|gb|ACI84995.1| flagellar basal body rod protein flgG [Escherichia coli] gi|209911591|dbj|BAG76665.1| flagellar basal-body rod protein FlgG [Escherichia coli SE11] gi|215264359|emb|CAS08716.1| flagellar component of cell-distal portion of basal-body rod [Escherichia coli O127:H6 str. E2348/69] gi|217318690|gb|EEC27116.1| flagellar basal-body rod protein FlgG [Escherichia coli O157:H7 str. TW14588] gi|218351344|emb|CAU97050.1| flagellar component of cell-distal portion of basal-body rod [Escherichia coli 55989] gi|218360424|emb|CAQ97978.1| flagellar component of cell-distal portion of basal-body rod [Escherichia coli IAI1] gi|218364729|emb|CAR02419.1| flagellar component of cell-distal portion of basal-body rod [Escherichia coli S88] gi|218370405|emb|CAR18212.1| flagellar component of cell-distal portion of basal-body rod [Escherichia coli IAI39] gi|218431583|emb|CAR12462.1| flagellar component of cell-distal portion of basal-body rod [Escherichia coli UMN026] gi|222032831|emb|CAP75570.1| flagellar basal-body rod protein flgG [Escherichia coli LF82] gi|226898146|gb|EEH84405.1| flagellar basal-body rod protein flgG [Escherichia sp. 3_2_53FAA] gi|227836768|gb|EEJ47234.1| flagellar basal body rod protein FlgG [Escherichia coli 83972] gi|238861100|gb|ACR63098.1| flagellar component of cell-distal portion of basal-body rod [Escherichia coli BW2952] gi|242376882|emb|CAQ31599.1| flagellar basal-body rod protein FlgG, subunit of Flagellar Motor Complex and Flagellum [Escherichia coli BL21(DE3)] gi|253324942|gb|ACT29544.1| flagellar basal-body rod protein FlgG [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253973085|gb|ACT38756.1| flagellar component of cell-distal portion of basal-body rod [Escherichia coli B str. REL606] gi|253977299|gb|ACT42969.1| flagellar component of cell-distal portion of basal-body rod [Escherichia coli BL21(DE3)] gi|254591860|gb|ACT71221.1| flagellar component of cell-distal portion of basal-body rod [Escherichia coli O157:H7 str. TW14359] gi|257753210|dbj|BAI24712.1| flagellar component FlgG of cell-distal portion of basal-body rod [Escherichia coli O26:H11 str. 11368] gi|257758465|dbj|BAI29962.1| flagellar component FlgG of cell-distal portion of basal-body rod [Escherichia coli O103:H2 str. 12009] gi|257763797|dbj|BAI35292.1| flagellar component FlgG of cell-distal portion of basal-body rod [Escherichia coli O111:H- str. 11128] gi|260449782|gb|ACX40204.1| flagellar basal-body rod protein FlgG [Escherichia coli DH1] gi|281178187|dbj|BAI54517.1| flagellar basal-body rod protein FlgG [Escherichia coli SE15] gi|284920901|emb|CBG33964.1| flagellar basal-body rod protein FlgG [Escherichia coli 042] gi|290761971|gb|ADD55932.1| Flagellar basal-body rod protein flgG [Escherichia coli O55:H7 str. CB9615] gi|291324187|gb|EFE63609.1| flagellar basal-body rod protein FlgG [Escherichia coli B088] gi|291428948|gb|EFF01973.1| flagellar basal-body rod protein flgG [Escherichia coli FVEC1412] gi|291469912|gb|EFF12396.1| flagellar basal-body rod protein FlgG [Escherichia coli B354] gi|294490415|gb|ADE89171.1| flagellar basal-body rod protein FlgG [Escherichia coli IHE3034] gi|298279840|gb|EFI21348.1| flagellar basal-body rod protein flgG [Escherichia coli FVEC1302] gi|299877395|gb|EFI85606.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 196-1] gi|300297159|gb|EFJ53544.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 185-1] gi|300307084|gb|EFJ61604.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 200-1] gi|300318618|gb|EFJ68402.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 175-1] gi|300356868|gb|EFJ72738.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 198-1] gi|300397110|gb|EFJ80648.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 69-1] gi|300405501|gb|EFJ89039.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 84-1] gi|300410625|gb|EFJ94163.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 45-1] gi|300414174|gb|EFJ97484.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 115-1] gi|300421081|gb|EFK04392.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 182-1] gi|300450520|gb|EFK14140.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 116-1] gi|300456428|gb|EFK19921.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 21-1] gi|300463628|gb|EFK27121.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 187-1] gi|300526440|gb|EFK47509.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 119-7] gi|300530554|gb|EFK51616.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 107-1] gi|300839701|gb|EFK67461.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 124-1] gi|300844944|gb|EFK72704.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 78-1] gi|301076719|gb|EFK91525.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 146-1] gi|305852710|gb|EFM53158.1| flagellar basal body rod protein FlgG [Escherichia coli NC101] gi|306909862|gb|EFN40356.1| flagellar basal-body rod protein FlgG [Escherichia coli W] gi|307553080|gb|ADN45855.1| flagellar basal-body rod protein FlgG [Escherichia coli ABU 83972] gi|308118355|gb|EFO55617.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 145-7] gi|309701350|emb|CBJ00651.1| flagellar basal-body rod protein FlgG [Escherichia coli ETEC H10407] gi|312286250|gb|EFR14163.1| flagellar basal-body rod protein FlgG [Escherichia coli 2362-75] gi|312945640|gb|ADR26467.1| flagellar basal body rod protein FlgG [Escherichia coli O83:H1 str. NRG 857C] gi|315060356|gb|ADT74683.1| flagellar component of cell-distal portion of basal-body rod [Escherichia coli W] gi|315135710|dbj|BAJ42869.1| flagellar basal-body rod protein flgG [Escherichia coli DH1] gi|315253879|gb|EFU33847.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 85-1] gi|315287367|gb|EFU46778.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 110-3] gi|315291072|gb|EFU50435.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 153-1] gi|315296709|gb|EFU56004.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 16-3] gi|315618248|gb|EFU98838.1| flagellar basal-body rod protein FlgG [Escherichia coli 3431] gi|320189761|gb|EFW64417.1| Flagellar basal-body rod protein FlgG [Escherichia coli O157:H7 str. EC1212] gi|320196440|gb|EFW71063.1| Flagellar basal-body rod protein FlgG [Escherichia coli WV_060327] gi|320200974|gb|EFW75558.1| Flagellar basal-body rod protein FlgG [Escherichia coli EC4100B] gi|320637529|gb|EFX07329.1| flagellar basal body rod protein FlgG [Escherichia coli O157:H7 str. G5101] gi|320643090|gb|EFX12291.1| flagellar basal body rod protein FlgG [Escherichia coli O157:H- str. 493-89] gi|320648548|gb|EFX17203.1| flagellar basal body rod protein FlgG [Escherichia coli O157:H- str. H 2687] gi|320653862|gb|EFX21936.1| flagellar basal body rod protein FlgG [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320659342|gb|EFX26911.1| flagellar basal body rod protein FlgG [Escherichia coli O55:H7 str. USDA 5905] gi|320664477|gb|EFX31628.1| flagellar basal body rod protein FlgG [Escherichia coli O157:H7 str. LSU-61] gi|323156885|gb|EFZ43019.1| flagellar basal-body rod protein FlgG [Escherichia coli EPECa14] gi|323163703|gb|EFZ49523.1| flagellar basal-body rod protein FlgG [Escherichia coli E128010] gi|323175691|gb|EFZ61285.1| flagellar basal-body rod protein FlgG [Escherichia coli 1180] gi|323185799|gb|EFZ71160.1| flagellar basal-body rod protein FlgG [Escherichia coli 1357] gi|323190590|gb|EFZ75862.1| flagellar basal-body rod protein FlgG [Escherichia coli RN587/1] gi|323379083|gb|ADX51351.1| flagellar basal-body rod protein FlgG [Escherichia coli KO11] gi|323937818|gb|EGB34082.1| flagellar basal-body rod protein FlgG [Escherichia coli E1520] gi|323942547|gb|EGB38714.1| flagellar basal-body rod protein FlgG [Escherichia coli E482] gi|323947620|gb|EGB43624.1| flagellar basal-body rod protein FlgG [Escherichia coli H120] gi|323953236|gb|EGB49102.1| flagellar basal-body rod protein FlgG [Escherichia coli H252] gi|323957902|gb|EGB53614.1| flagellar basal-body rod protein FlgG [Escherichia coli H263] gi|323962677|gb|EGB58255.1| flagellar basal-body rod protein FlgG [Escherichia coli H489] gi|323967019|gb|EGB62445.1| flagellar basal-body rod protein FlgG [Escherichia coli M863] gi|323973333|gb|EGB68522.1| flagellar basal-body rod protein FlgG [Escherichia coli TA007] gi|323976549|gb|EGB71637.1| flagellar basal-body rod protein FlgG [Escherichia coli TW10509] gi|324007918|gb|EGB77137.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 57-2] gi|324013352|gb|EGB82571.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 60-1] gi|324017418|gb|EGB86637.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 117-3] gi|324117351|gb|EGC11258.1| flagellar basal-body rod protein FlgG [Escherichia coli E1167] gi|326339300|gb|EGD63114.1| Flagellar basal-body rod protein FlgG [Escherichia coli O157:H7 str. 1125] gi|326344739|gb|EGD68487.1| Flagellar basal-body rod protein FlgG [Escherichia coli O157:H7 str. 1044] gi|327253477|gb|EGE65115.1| flagellar basal-body rod protein FlgG [Escherichia coli STEC_7v] gi|330910892|gb|EGH39402.1| flagellar basal-body rod protein FlgG [Escherichia coli AA86] gi|331038420|gb|EGI10640.1| flagellar basal-body rod protein FlgG [Escherichia coli H736] gi|331045088|gb|EGI17215.1| flagellar basal-body rod protein FlgG [Escherichia coli M605] gi|331055388|gb|EGI27397.1| flagellar basal-body rod protein FlgG [Escherichia coli TA206] gi|331060906|gb|EGI32870.1| flagellar basal-body rod protein FlgG [Escherichia coli TA143] gi|331065063|gb|EGI36958.1| flagellar basal-body rod protein FlgG [Escherichia coli TA271] gi|331070241|gb|EGI41607.1| flagellar basal-body rod protein FlgG [Escherichia coli TA280] gi|331075558|gb|EGI46856.1| flagellar basal-body rod protein FlgG [Escherichia coli H591] gi|331080211|gb|EGI51390.1| flagellar basal-body rod protein FlgG [Escherichia coli H299] gi|332102086|gb|EGJ05432.1| flagellar basal-body rod protein FlgG [Shigella sp. D9] gi|333004888|gb|EGK24408.1| flagellar basal-body rod protein FlgG [Shigella flexneri VA-6] Length = 260 Score = 168 bits (425), Expect = 6e-40, Method: Composition-based stats. Identities = 42/259 (16%), Positives = 88/259 (33%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M +S I A + + +A+N++N T GF+ + F +++ Sbjct: 1 MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+ T D A++G +F + P TRDG F Sbjct: 61 TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGSSAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V +G LV+A G + + V + + + L + Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + + +G++E SN N E+ MI + + + Sbjct: 181 DTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + ++ + + + Sbjct: 241 EINSKAVSTTDQMLQKLTQ 259 >gi|118475132|ref|YP_891713.1| flagellar basal body rod protein FlgG [Campylobacter fetus subsp. fetus 82-40] gi|118414358|gb|ABK82778.1| flagellar basal-body rod protein FlgG [Campylobacter fetus subsp. fetus 82-40] Length = 262 Score = 168 bits (425), Expect = 6e-40, Method: Composition-based stats. Identities = 46/261 (17%), Positives = 100/261 (38%), Gaps = 21/261 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S +A + ++ T + N++N +T+G++ + +F++++ Sbjct: 1 MIRSLYTAATGMVAQQTQIDTTSHNIANVNTIGYKKNRAEFADLMYQTMQYAGTPTSTTT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + V G F TG LD + G+ +F ++ P TR+G F Sbjct: 61 MSPTGMEVGLGVRPTAITKVFGQGYFKETGNNLDMVIAGNGFFQIQLPDGTTAYTRNGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 K+ DG++V++ G + +M + V +Q+ I + L + Sbjct: 121 KLDGDGNIVNSDGYRLLPEMNIPADATQISVGVDGTVSVLQPGNQEMTQIGQIELANFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ +G T +K+GF+E SN + EM +I + + Sbjct: 181 PSGLHAMGDNNFLETAASGAPNIGNGGTDGFGQIKQGFVEMSNVQLVEEMTDLITGQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + + I ++ + + + + Sbjct: 241 EANSKAITTADEML-QTVNQL 260 >gi|260779345|ref|ZP_05888237.1| flagellar basal-body rod protein FlgG [Vibrio coralliilyticus ATCC BAA-450] gi|260605509|gb|EEX31804.1| flagellar basal-body rod protein FlgG [Vibrio coralliilyticus ATCC BAA-450] Length = 261 Score = 168 bits (425), Expect = 6e-40, Method: Composition-based stats. Identities = 46/261 (17%), Positives = 100/261 (38%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M ++ + A + +++ +++N++N +TVGF+ +V F ++ +I+ Sbjct: 1 MHSALWVSKTGMAAQDTKMTAISNNLANVNTVGFKRDRVVFEDLFYSIQRQPGALVDQVN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106 Q S V G+ +T ELD A+ G +F +E+ I+ TR+G+F Sbjct: 61 ELPAGVQLGSGVRVVGTQKVFTQGNTQNTSQELDLAVMGQGFFQIENSDGQIMYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 V +G +V++ G + + + V S + + + L Sbjct: 121 HVNSEGLMVNSQGLPLEPQIQIPENALSVSVGVDGTVSATTADSTAPQELGQITLAKFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + ++ ++K+G LE SN + EM MI + + Sbjct: 181 PAGLEAVGGNLFRETEASGQADELIAGEDGVGSIKQGSLEGSNVQVVEEMVDMITTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 ++ + + +++ Sbjct: 241 EMNAKVVSAADDMLKFVAQSV 261 >gi|288940411|ref|YP_003442651.1| flagellar basal-body rod protein FlgG [Allochromatium vinosum DSM 180] gi|288895783|gb|ADC61619.1| flagellar basal-body rod protein FlgG [Allochromatium vinosum DSM 180] Length = 263 Score = 168 bits (425), Expect = 6e-40, Method: Composition-based stats. Identities = 52/262 (19%), Positives = 96/262 (36%), Gaps = 20/262 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + I A + R+S V++N++N +T GF+ + F +++ Sbjct: 1 MNQALWIAKTGLDAQQTRMSVVSNNLANVNTTGFKKGRAVFEDLIYHSCRQHGAQATQET 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 + V + G++I TG LD A+EG +F + P G I TRDG F Sbjct: 61 QLPSGLTIGTGVRTVATQKLFAQGNYIQTGNSLDMAIEGQGFFQILMPGGEIGYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-IATMGLYSVDM 165 ++ DG +V ++G + + +Q G+V I + L + Sbjct: 121 QLNADGEVVMSNGYALQPALVIPADAESITIGKDGTVSIKQPNQVGEVQIGQIQLANFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + ++ + LE SN N E+ MI + + Sbjct: 181 PAGLQPIGENLFRETTASGAPQQSNPGENGFGSLVQCSLETSNVNMAEELVNMIETQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNIA 242 + I + + N+A Sbjct: 241 EVNSKAISAADSMLQFVNNNLA 262 >gi|251797436|ref|YP_003012167.1| hypothetical protein Pjdr2_3448 [Paenibacillus sp. JDR-2] gi|247545062|gb|ACT02081.1| protein of unknown function DUF1078 domain protein [Paenibacillus sp. JDR-2] Length = 270 Score = 168 bits (425), Expect = 6e-40, Method: Composition-based stats. Identities = 50/267 (18%), Positives = 100/267 (37%), Gaps = 28/267 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ + +L + +N++N +TVGF+ +V FS+++ + + Sbjct: 1 MLRSMYSGVSGMRGFQTKLDVIGNNIANVNTVGFKGGRVMFSDILSQTTSGVTASLEGEQ 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP--RGIILTRDGR 105 Q V GS ++T D ++GD +FA+ + LTR G Sbjct: 61 GGVNAKQIGLGVTISAIDTIHTPGSAMTTNVPTDLRIDGDGFFAVSAGGDSPTYLTRAGN 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVP---IQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162 F + + LV+A G + + + + + + +A +G+ Sbjct: 121 FTLDGNRQLVNADGMFVLSSDGEPIVLGEDVTSFSIGQDGSILAVTADGTEAVAQLGVVK 180 Query: 163 VDMSQGFVRRENSGISPNIPPTPLEDLSGVT----------VKRGFLEDSNANSMYEMGQ 212 V G + + P + VT + G LE SN + E + Sbjct: 181 VVNPSGLEKVGGNLYRVTANANPDGEFEIVTADDPELGTGAIIAGQLEMSNVDLTNEFTE 240 Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIR 239 MI + F + + +I +++ + E + Sbjct: 241 MIVAQRGFQANSRIITTSDEILQEVVN 267 >gi|224417699|ref|ZP_03655705.1| flagellar basal body rod protein FlgG [Helicobacter canadensis MIT 98-5491] gi|253827048|ref|ZP_04869933.1| flagellar distal rod protein FlgG [Helicobacter canadensis MIT 98-5491] gi|253510454|gb|EES89113.1| flagellar distal rod protein FlgG [Helicobacter canadensis MIT 98-5491] Length = 263 Score = 168 bits (425), Expect = 6e-40, Method: Composition-based stats. Identities = 47/262 (17%), Positives = 101/262 (38%), Gaps = 23/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + L + ++ ++N+SN +T G+R + +F+++ + Sbjct: 1 MMRALYTATTGMLGQQLQIDVTSNNISNVNTFGYRKERAEFADLFHQVLQYAGSSTSETT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 V G+F T LD A+ G+ +F +E P I TRDG F Sbjct: 61 LSPTGIEVGLGVRPTSVQKIFSQGNFKETENNLDIAITGNGFFQIELPDGTIAYTRDGSF 120 Query: 107 KVTDDGSLVSASGK--YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 K+ D+G++V++ G P + + QI + +G ++ + + + + Sbjct: 121 KLDDEGNVVNSQGYLLVPNITIPDDATQINIGTDGTVSVVQGNETEVNE-LGQIETVNFI 179 Query: 165 MSQGFVRRENSGI-SPNIPPTP----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G ++ + N P +++GF+E SN + EM +I + Sbjct: 180 NPAGLHALGDNLYLNTNASGDPIVGTPGLNGFGQLRQGFVETSNVKLVEEMTDLIVGQRA 239 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + + I + + + + + Sbjct: 240 YEANSKSIQTADSML-QIVNQL 260 >gi|223040682|ref|ZP_03610951.1| flagellar basal-body rod protein FlgG [Campylobacter rectus RM3267] gi|222878046|gb|EEF13158.1| flagellar basal-body rod protein FlgG [Campylobacter rectus RM3267] Length = 262 Score = 168 bits (425), Expect = 6e-40, Method: Composition-based stats. Identities = 38/261 (14%), Positives = 92/261 (35%), Gaps = 21/261 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S +A + ++ + N++N +T+G++ + +F++++ + Sbjct: 1 MMRSIYSAATGMIAQQTQIDVTSHNIANVNTIGYKKNRAEFADLMYQVMEYAGTATSATT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 G F T LD + G+ +F ++ P TR+G F Sbjct: 61 KSPTGIEVGLGARPTAITKIFSQGYFKETSNNLDMVIAGNGFFQVQLPDGTTAYTRNGAF 120 Query: 107 KVTDDGSLVSASGKY-PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 K+ +G++V++ G V + + + + L + Sbjct: 121 KLNSEGTVVNSDGYVLQPQMTIPADATQISVGTDGTVSVLQPGNTEMAQVGRIELANFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ P + T+++GF+E SN + EM +I + + Sbjct: 181 PAGLHSMGDNLYLPTGSSGEVVVGTAGLDGLGTIRQGFVEMSNVQLVEEMTDLITGQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + + I ++ + + ++ Sbjct: 241 EANSKAITTSDDML-SIVNSL 260 >gi|15639945|ref|NP_219398.1| flagellar basal-body rod protein (flgG-2) [Treponema pallidum subsp. pallidum str. Nichols] gi|189026184|ref|YP_001933956.1| flagellar basal-body rod protein [Treponema pallidum subsp. pallidum SS14] gi|3323282|gb|AAC65916.1| flagellar basal-body rod protein (flgG-2) [Treponema pallidum subsp. pallidum str. Nichols] gi|189018759|gb|ACD71377.1| flagellar basal-body rod protein [Treponema pallidum subsp. pallidum SS14] gi|291060316|gb|ADD73051.1| flagellar basal-body rod protein [Treponema pallidum subsp. pallidum str. Chicago] Length = 271 Score = 168 bits (425), Expect = 6e-40, Method: Composition-based stats. Identities = 50/267 (18%), Positives = 100/267 (37%), Gaps = 26/267 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKND------ 51 M + + A ++RL +A N++N DT ++ F E++ ND Sbjct: 1 MIRGWYTAASGMSAQQRRLDAIAQNLANVDTTSYKRDVAVHKSFPELLLRRVNDDGVVKN 60 Query: 52 ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101 + + V + + E GS T + D ALEG +F + +P+G T Sbjct: 61 PFGSSDVSPIVGKLGLGVEVNELFTEFEQGSLKQTQSPSDIALEGMGFFVIRTPQGEEYT 120 Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMA----SVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157 R+G F V +G L++ +G + + ++ V G + Sbjct: 121 RNGNFLVGVEGYLMTKNGYPVLGENGPLFLQERYYTINQNGEIYVRPIDRPDVDGFFLDR 180 Query: 158 MGLYSVDMSQGFVRRENS-GISPNIPPTPL--EDLSGVTVKRGFLEDSNANSMYEMGQMI 214 + + + + + ++ + + P+ E +GF+E SN N + EM +MI Sbjct: 181 LKIVTFENVRYLQKKGADTYMQTPVSGAPIAAEGPERPAAVQGFVEASNVNVVNEMVRMI 240 Query: 215 HLTQKFNSITTLIDENEKSMLEAIRNI 241 + + + + I + M + Sbjct: 241 EVNRAYEANQKTIQAEDGMMGRLWNEV 267 >gi|237653581|ref|YP_002889895.1| flagellar basal body rod protein FlgG [Thauera sp. MZ1T] gi|237624828|gb|ACR01518.1| flagellar basal-body rod protein FlgG [Thauera sp. MZ1T] Length = 260 Score = 168 bits (425), Expect = 6e-40, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 89/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S A + L +++N++N T GF+ + F +++ Sbjct: 1 MIRSLWTARTGLDAQQTSLDVISNNLANVSTNGFKRQRAIFEDLLYQTIRQPGAQSTQQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+ TG LD A++G+ +F + P TRDG F Sbjct: 61 QISSGLQIGTGVKPVATERIFTQGTLQQTGGSLDVAVQGNGFFQVAMPDGTTAYTRDGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 ++ G++V+ASG ++ + + V I + L + Sbjct: 121 QLDSQGNVVTASGYTLADNINIPADALSITIGKDGTVSVLQAGQTAPVEIGAIQLATFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 S G + T + +G++E SN N E+ MI + + Sbjct: 181 SGGLQAAGENLFYETASSGVATPTQPGTNGAGVLNQGYVEVSNVNVAEELVSMIVTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + I +++ + + Sbjct: 241 ELNSRAISTSDQMLGRLTQ 259 >gi|320173530|gb|EFW48726.1| Flagellar basal-body rod protein FlgG [Shigella dysenteriae CDC 74-1112] Length = 260 Score = 168 bits (425), Expect = 6e-40, Method: Composition-based stats. Identities = 42/259 (16%), Positives = 89/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M +S I A + + +A+N++N T GF+ + F +++ Sbjct: 1 MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+ T D A++G +F + P + TRDG F Sbjct: 61 TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGSSVYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V +G LV+A G + + V + + + L + Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + + +G++E SN N E+ MI + + + Sbjct: 181 DTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + ++ + + + Sbjct: 241 EINSKAVSTTDQMLQKLTQ 259 >gi|251789170|ref|YP_003003891.1| flagellar basal-body rod protein FlgG [Dickeya zeae Ech1591] gi|247537791|gb|ACT06412.1| flagellar basal-body rod protein FlgG [Dickeya zeae Ech1591] Length = 260 Score = 168 bits (425), Expect = 6e-40, Method: Composition-based stats. Identities = 45/259 (17%), Positives = 84/259 (32%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + + +++N++N T GF+ + F +++ Sbjct: 1 MIRSLWIAKTGLNAQQTNMDVISNNLANVSTNGFKRQRAVFEDLMYQTVRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V GSF TG D A++G +F + P TRDG F Sbjct: 61 TLPSGLQLGTGVRPVATERIHTQGSFSETGNVKDLAIKGAGFFQVLMPDGTTAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 + +G LV++SG + V + I + L Sbjct: 121 QQDSNGQLVTSSGFQVQPVITIPANSSNLTVGRDGVVTVTQQGQAAPVQIGQLNLAMFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + + F+E SN N E+ MI + + Sbjct: 181 EAGLENLGENLYAETASSGAPTQSTPGLNGAGLIYQKFVETSNVNVAEELVSMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + I ++ + + + Sbjct: 241 EINSKAISSTDQMLQKLTQ 259 >gi|119899025|ref|YP_934238.1| flagellar basal body rod protein FlgG [Azoarcus sp. BH72] gi|119671438|emb|CAL95351.1| flagellar basal-body rod protein FlgG [Azoarcus sp. BH72] Length = 260 Score = 168 bits (425), Expect = 7e-40, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 90/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S A + L +++N++N T GF+ + F +++ Sbjct: 1 MIRSLWTARTGLDAQQTSLDVISNNLANVSTNGFKRQRAVFEDLLYQTMRQPGAQSTQQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+ TG LD A++G+ +F + P TRDG F Sbjct: 61 QVGSGLQIGTGVRPVATERIFTQGNLQQTGGSLDIAIQGNGFFQIALPDGTTAYTRDGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 ++ + G++V+ASG ++ + + V I + L + Sbjct: 121 QLDNQGNVVTASGYPLADNINIPADTLTVTVAKDGTVSVLQAGQTTPTQIGAIQLATFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 S G + + T + +G++E SN N E+ MI + + Sbjct: 181 SGGLQSAGENLFLESASSGVATPNQPGTNGTGVLNQGYVETSNVNVAEELVNMIVTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + I ++ + + Sbjct: 241 EMNSRAIQTSDSMLGRLTQ 259 >gi|285018207|ref|YP_003375918.1| flagellar basal-body rod protein flgg [Xanthomonas albilineans GPE PC73] gi|283473425|emb|CBA15930.1| probable flagellar basal-body rod protein flgg [Xanthomonas albilineans] Length = 261 Score = 168 bits (425), Expect = 7e-40, Method: Composition-based stats. Identities = 51/260 (19%), Positives = 87/260 (33%), Gaps = 20/260 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + R+S V++N++NT T GF+ + F +++ + Sbjct: 1 MNQALWVAKTGMDAQQTRMSVVSNNLANTSTTGFKRDRASFEDLLYQQRRQPGGASSSQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V E GS TG LD + G + ++ P G TRDG Sbjct: 61 QLPSGLQLGTGVRVVATSKDFEQGSQQQTGRALDVMVNGRGFLEVQMPDGTSAYTRDGSL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V G LV+ SG + V + S + ++ L Sbjct: 121 QVNAQGQLVTNSGYAIQPGIQIPEGAQSLTIGNDGTVSVQVPGSAAALQVGSLTLTDFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + P + + T +G LE SN N + E+ MI + + Sbjct: 181 PSGLQATGQNLYVETAASGPAQSGTPGLNGLGTTVQGALEGSNVNVVEELVSMIETQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRN 240 I + + N Sbjct: 241 EMNAKAISTTDAMLGYLNNN 260 >gi|331652131|ref|ZP_08353150.1| flagellar basal-body rod protein FlgG [Escherichia coli M718] gi|331050409|gb|EGI22467.1| flagellar basal-body rod protein FlgG [Escherichia coli M718] Length = 260 Score = 168 bits (424), Expect = 7e-40, Method: Composition-based stats. Identities = 42/259 (16%), Positives = 88/259 (33%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M +S I A + + +A+N++N T GF+ + F +++ Sbjct: 1 MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+ T D A++G +F + P TRDG F Sbjct: 61 TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGSSAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V +G LV+A G + + V + + + L + Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + + +G++E SN N E+ MI + + + Sbjct: 181 ETGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + ++ + + + Sbjct: 241 EINSKAVSTTDQMLQKLTQ 259 >gi|218528725|ref|YP_002419541.1| flagellar basal body rod protein [Methylobacterium chloromethanicum CM4] gi|218521028|gb|ACK81613.1| flagellar basal body rod protein [Methylobacterium chloromethanicum CM4] Length = 242 Score = 168 bits (424), Expect = 7e-40, Method: Composition-based stats. Identities = 73/243 (30%), Positives = 137/243 (56%), Gaps = 5/243 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 MQ+S + L++Q+ALE+RL+T A+N++N TVGFR +V FSE++ +++FV Sbjct: 1 MQSSLYVALSSQIALEKRLTTTANNVANMATVGFRAEEVSFSELLARSNRG---EVAFVG 57 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 GK +S+ G T + LD A++GDAW ++ P+ + TRDGR + +G L + G Sbjct: 58 PGKTTISRAAGPTTKTDSTLDVAVQGDAWLGVKGPKGDTLYTRDGRLTMDANGQLRTV-G 116 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 PV+D P+ + + +G G I Q + +G++S+D R + ++ Sbjct: 117 GMPVVDPGGGPLLLDPQAGPPVIGRDGSIHQGVNQVGALGVFSIDPKATLTRSGENAVAA 176 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 ++P P++D + + + +G++E +N N + EM ++I + + F S T+ E + ++ A++ Sbjct: 177 SLPGRPVQDFTRIGLVQGYVEGANVNPIMEMTRLIAIQRAFESAATMTSEADTTLTGAVK 236 Query: 240 NIA 242 + Sbjct: 237 TLG 239 >gi|147678415|ref|YP_001212630.1| flagellar hook protein FlgE [Pelotomaculum thermopropionicum SI] gi|146274512|dbj|BAF60261.1| flagellar hook protein FlgE [Pelotomaculum thermopropionicum SI] Length = 269 Score = 168 bits (424), Expect = 7e-40, Method: Composition-based stats. Identities = 51/265 (19%), Positives = 100/265 (37%), Gaps = 27/265 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50 M S G + + + R+ + +N++N +T+GF+ + F +V+ Sbjct: 1 MLRSLYAGASGLRSHQTRMDVIGNNIANVNTIGFKGSRANFQDVLYQTIRFGSAGSDNTG 60 Query: 51 --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---RGIILTRDGR 105 + Q V + G STG +LD A+ G+ WF ++ + TR+G Sbjct: 61 GVNKSQVGLGVTVASITNNTGPGGMQSTGRDLDLAINGNGWFMVKPDASQDEVYYTREGT 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG------KVIATMG 159 F + ++G LV+++G Y + + + N+ + G IS + +G Sbjct: 121 FYIDNNGYLVNSNGYYLLDVSGNTIQFPSEGVASINISKDGIISYTPLGGEMVENAFQIG 180 Query: 160 LYSVDMSQGFVRRENSGI------SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQM 213 L G R ++ + T+ G+LE SN + E M Sbjct: 181 LAMFPNQDGLERVGSNTFKESLTSGAALDEKTPNSGGLGTINSGYLEMSNVDLTDEFTNM 240 Query: 214 IHLTQKFNSITTLIDENEKSMLEAI 238 I + + + I ++ + E + Sbjct: 241 ISTQRGYQANARTITVTDQMIEELL 265 >gi|163850121|ref|YP_001638164.1| flagellar basal body rod protein [Methylobacterium extorquens PA1] gi|240137255|ref|YP_002961724.1| Flagellar basal-body rod protein flgF [Methylobacterium extorquens AM1] gi|254559266|ref|YP_003066361.1| flagellar basal-body rod protein flgF [Methylobacterium extorquens DM4] gi|163661726|gb|ABY29093.1| flagellar basal body rod protein [Methylobacterium extorquens PA1] gi|240007221|gb|ACS38447.1| Flagellar basal-body rod protein flgF [Methylobacterium extorquens AM1] gi|254266544|emb|CAX22308.1| Flagellar basal-body rod protein flgF [Methylobacterium extorquens DM4] Length = 242 Score = 168 bits (424), Expect = 7e-40, Method: Composition-based stats. Identities = 73/243 (30%), Positives = 137/243 (56%), Gaps = 5/243 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 MQ+S + L++Q+ALE+RL+T A+N++N TVGFR +V FSE++ +++FV Sbjct: 1 MQSSLYVALSSQIALEKRLTTTANNVANMATVGFRAEEVSFSELLARSNRG---EVAFVG 57 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 GK +S+ G T + LD A++GDAW ++ P+ + TRDGR + +G L + G Sbjct: 58 PGKTTISRAAGPTTKTDSALDVAVQGDAWLGVKGPKGDTLYTRDGRLTMDANGQLRTV-G 116 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 PV+D P+ + + +G G I Q + +G++S+D R + ++ Sbjct: 117 GMPVVDPGGGPLLLDPQAGPPVIGRDGSIHQGVNQVGALGVFSIDPKATLTRSGENAVAA 176 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 ++P P++D + + + +G++E +N N + EM ++I + + F S T+ E + ++ A++ Sbjct: 177 SLPGRPVQDFTRIGLVQGYVEGANVNPIMEMTRLIAIQRAFESAATMTSEADTTLTGAVK 236 Query: 240 NIA 242 + Sbjct: 237 TLG 239 >gi|118589981|ref|ZP_01547385.1| Flagellar basal-body rod FlgG [Stappia aggregata IAM 12614] gi|118437478|gb|EAV44115.1| Flagellar basal-body rod FlgG [Stappia aggregata IAM 12614] Length = 262 Score = 168 bits (424), Expect = 7e-40, Method: Composition-based stats. Identities = 44/262 (16%), Positives = 88/262 (33%), Gaps = 21/262 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----------- 50 + I A + + VA+N++N +T F+ + +FS+++ + Sbjct: 1 MKALAIAATGMSAQQMNVEVVANNIANMNTTSFKRSQAEFSDLLYQAERLQGVPNRGGED 60 Query: 51 ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRF 106 + Q V + GS +TG + D AL+G WF + P + TR G F Sbjct: 61 PVPEGAQLGLGVRTAGIRKLHAQGSLTNTGNQFDVALDGRGWFEITGPDDETLFTRAGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE-KGEISQKGKVIATMGLYSVDM 165 DG LV+ G + I K + + + + L + Sbjct: 121 NKNADGRLVTIDGYPVEPAIIVPQETIEVVVNESGQVFAKVDGEMAPRELGQLTLSNFAN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + +++G+LE SN + + E+ +I + + Sbjct: 181 DVGLEPVGGNLFRETEASGSPVSGVAGDPGFGVIRQGYLESSNVDPVKEITALISAQRGY 240 Query: 221 NSITTLIDENEKSMLEAIRNIA 242 + ++ ++ I Sbjct: 241 EMNSKVMKAADEMAGTVTNGIR 262 >gi|212709494|ref|ZP_03317622.1| hypothetical protein PROVALCAL_00536 [Providencia alcalifaciens DSM 30120] gi|212687832|gb|EEB47360.1| hypothetical protein PROVALCAL_00536 [Providencia alcalifaciens DSM 30120] Length = 260 Score = 168 bits (424), Expect = 7e-40, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 87/259 (33%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + L +++N++N T GF+ + F +++ Sbjct: 1 MIRSLWIAKTGLDAQQTNLDVISNNLANVSTNGFKRQRAVFEDLLYQNIRQPGAMSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + G+ TGT D A++G + ++ P G TRDG Sbjct: 61 SLPSGLQMGTGARPVATVRIHSQGNLNKTGTTTDIAIKGQGFLHVQMPDGTDAYTRDGAL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 + DG LV++SG V + V + + I + L + Sbjct: 121 QRNQDGQLVTSSGYQVVPAIMIPENANSLSIARDGTVSVTVYGDNQPQQIGQITLTTFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + T + +G LE SN N E+ MI + + Sbjct: 181 DAGLESMGENLYMETASSGAPNESAPGTNGAGLLYQGMLETSNVNVAEELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + Sbjct: 241 EINSKAVSASDQMLQRLTQ 259 >gi|224534494|ref|ZP_03675070.1| flagellar hook-basal body complex protein [Borrelia spielmanii A14S] gi|224514171|gb|EEF84489.1| flagellar hook-basal body complex protein [Borrelia spielmanii A14S] Length = 282 Score = 168 bits (424), Expect = 7e-40, Method: Composition-based stats. Identities = 47/280 (16%), Positives = 104/280 (37%), Gaps = 38/280 (13%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51 M + +A ++L V++N++N D +G++ F E++ ND Sbjct: 1 MVRGIYTAASGMMAERRKLDVVSNNLANIDLIGYKKDLSIQKAFPEMLIRRLNDDGLYKF 60 Query: 52 ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101 + + + V + Y E G +TG LD AL +F +++ G T Sbjct: 61 PKGHLETAPIVGKLGTGVEENEIYTIFEQGPLKTTGNPLDLALTDQGFFVIQTSDGERYT 120 Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI------------- 148 R+G F + +G LV+ +G + + + ++ Sbjct: 121 RNGSFTIGKEGILVTKNGFPVLGEKGYIYLKKNNFKITPQGQIFHNSNFASNPKRLVSEH 180 Query: 149 ---SQKGKVIATMGLYSVDMSQGFVRRENSGIS---PNIPPTPLEDLSGVTVKRGFLEDS 202 + +++ T+ + + + + ++ NS + ++ ++ LE S Sbjct: 181 ENSWENYELLDTIRIVNFENPRFLKKQGNSLWIDTKTSGKAQEIDVSLRPKIETEALEAS 240 Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 N N++ EM MI + + + + I + + + I I Sbjct: 241 NVNAVKEMVLMIEINRAYEANQKTIQTEDSLLGKLINEIG 280 >gi|42526518|ref|NP_971616.1| flagellar basal body rod protein FlgG [Treponema denticola ATCC 35405] gi|41816711|gb|AAS11497.1| flagellar basal-body rod protein FlgG [Treponema denticola ATCC 35405] gi|325473456|gb|EGC76651.1| flagellar basal-body rod protein FlgG [Treponema denticola F0402] Length = 264 Score = 168 bits (424), Expect = 7e-40, Method: Composition-based stats. Identities = 48/261 (18%), Positives = 88/261 (33%), Gaps = 22/261 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S + + TVA+N++N +T GF+ + +F +++ Sbjct: 1 MVRSLWTAATGMNTQQANIDTVANNLANVNTSGFKKQRAEFEDLIYQTVKTAGTPATEDT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q E GS +TG D A++G+ +F + G TRDG F Sbjct: 61 ITPVGVQMGHGARLAATQRIFEQGSLQNTGVTSDIAIQGEGFFRVLQYDGTYAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLD---MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 K+ D LV+++G + + V K + + LY Sbjct: 121 KIDADRQLVTSNGLRVLPEIIFPEGYRENTIAVSRDGRVTVKVGDIDDPIEVGQIELYRF 180 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 + G ++ + FLE SN +++ EM MI + Sbjct: 181 QNNAGLSAEGSNLFRQTPASGTAIPGRPGFTGFGRTEHKFLEMSNVSTVSEMVNMIVAQR 240 Query: 219 KFNSITTLIDENEKSMLEAIR 239 + + I ++ + A+ Sbjct: 241 AYEFNSKAIQTSDNMLGTAVS 261 >gi|299066528|emb|CBJ37718.1| Flagellar basal-body rod protein (Distal rod protein) [Ralstonia solanacearum CMR15] Length = 263 Score = 168 bits (424), Expect = 7e-40, Method: Composition-based stats. Identities = 46/263 (17%), Positives = 95/263 (36%), Gaps = 22/263 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + +G A + L T+A+N++N +T GF+ +V F+++V I Sbjct: 1 MFDALYVGATGMQAQQLNLDTIANNLANVNTTGFKKSRVSFTDLVAQEAGRIQPTSDASL 60 Query: 56 ---------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGR 105 + V + G+ TG+ D A++G+ + + P G TR G Sbjct: 61 GPLSALPGLGAGVGISSVAKLFDTGNMQQTGSSFDVAIQGEGFLEVALPDGSRAFTRGGT 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVD 164 KV DG LV+ +G ++ +V + L Sbjct: 121 LKVNSDGMLVTQAGYVVKPGISVPSNAKDLTIAADGHVRISVPNQSSPIDAGQLELAHFA 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 + + ++ + + T +GFLE SN + EM ++ + Sbjct: 181 SPGMLLAQGDNLYRASDTSGEPVVGKAGQDNLGTFAQGFLEGSNVKMIDEMVGLMVAQRA 240 Query: 220 FNSITTLIDENEKSMLEAIRNIA 242 + + ++ +++ + + N+ Sbjct: 241 YEANVKVVQASDEILG-MVNNLR 262 >gi|118589943|ref|ZP_01547347.1| flagellar basal body rod protein [Stappia aggregata IAM 12614] gi|118437440|gb|EAV44077.1| flagellar basal body rod protein [Stappia aggregata IAM 12614] Length = 243 Score = 168 bits (424), Expect = 8e-40, Method: Composition-based stats. Identities = 80/244 (32%), Positives = 134/244 (54%), Gaps = 4/244 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M+++ + L+AQ+AL RL TVA N++N +T G+R +VKF+E+V D K+SF Sbjct: 1 MESALYVALSAQVALSNRLETVARNVANMNTAGYRADEVKFAELVSKAGQD---KVSFST 57 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLVSASG 119 G++Y+S++ GS T LD A+EG+AWFA+ G + TRDGR ++ +DG+L + +G Sbjct: 58 GGEKYISRQYGSLNKTDNPLDLAVEGEAWFAIRDANGNLSYTRDGRLQIGNDGTLRTLTG 117 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 + + P +I +GL+ + R ENS + P Sbjct: 118 QQILGAGGQPISLDPDAGTPLITQSGEISQNDVGIIGQVGLFLIPDDAQLTRAENSAVIP 177 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + P P++ V++G++E SN N + EM +MI +++ F S T +ID + +S +AIR Sbjct: 178 DKPVIPVQTYDTNGVRQGYVEGSNINPVREMTKMIMISRAFESATKMIDTSNESQEKAIR 237 Query: 240 NIAS 243 + + Sbjct: 238 ELGA 241 >gi|154710440|gb|ABS84283.1| FlgG-2 [Treponema paraluiscuniculi] Length = 271 Score = 168 bits (424), Expect = 8e-40, Method: Composition-based stats. Identities = 50/267 (18%), Positives = 99/267 (37%), Gaps = 26/267 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKND------ 51 M + + A + RL +A N++N DT ++ F E++ ND Sbjct: 1 MIRGWYTAASGMSAQQHRLDAIAQNLANVDTTSYKRDVAVHKSFPELLLRRVNDDGVVKN 60 Query: 52 ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101 + + V + + E GS T + D ALEG +F + +P+G T Sbjct: 61 PFGSSDVSPIVGKLGLGVEVNELFTEFEQGSLKQTQSPSDIALEGMGFFVIRTPQGEEYT 120 Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMA----SVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157 R+G F V +G L++ +G + + ++ V G + Sbjct: 121 RNGNFLVGVEGYLMTKNGYPVLGENGPLFLQERYYTINQNGEIYVRPIDRPDVDGFFLDR 180 Query: 158 MGLYSVDMSQGFVRRENS-GISPNIPPTPL--EDLSGVTVKRGFLEDSNANSMYEMGQMI 214 + + + + + ++ + + P+ E +GF+E SN N + EM +MI Sbjct: 181 LKIVTFENVRYLQKKGADTYMQTPVSGAPIAAEGPERPAAVQGFVEASNVNVVNEMVRMI 240 Query: 215 HLTQKFNSITTLIDENEKSMLEAIRNI 241 + + + + I + M + Sbjct: 241 EVNRAYEANQKTIQAEDGMMGRLWNEV 267 >gi|77463650|ref|YP_353154.1| flagellar distal rod protein [Rhodobacter sphaeroides 2.4.1] gi|126462482|ref|YP_001043596.1| flagellar basal-body rod protein FlgG [Rhodobacter sphaeroides ATCC 17029] gi|221639493|ref|YP_002525755.1| Flagellar basal-body rod protein FlgG [Rhodobacter sphaeroides KD131] gi|332558506|ref|ZP_08412828.1| FlgG [Rhodobacter sphaeroides WS8N] gi|11095160|gb|AAG29749.1|AF205139_1 flagellar distal rod protein [Rhodobacter sphaeroides] gi|77388068|gb|ABA79253.1| Flagellar distal rod protein [Rhodobacter sphaeroides 2.4.1] gi|126104146|gb|ABN76824.1| flagellar basal-body rod protein FlgG [Rhodobacter sphaeroides ATCC 17029] gi|221160274|gb|ACM01254.1| Flagellar basal-body rod protein FlgG [Rhodobacter sphaeroides KD131] gi|332276218|gb|EGJ21533.1| FlgG [Rhodobacter sphaeroides WS8N] Length = 262 Score = 168 bits (424), Expect = 8e-40, Method: Composition-based stats. Identities = 44/260 (16%), Positives = 93/260 (35%), Gaps = 22/260 (8%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------- 55 + ++ A + R+ +++N++N +T GF+ + F ++ + Sbjct: 4 NAMHVASTGLNAQQTRMQVISNNLANVNTTGFKRDRANFESLLYQTWKPGGAQTSEATAM 63 Query: 56 ------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKV 108 + V GS +T LD A++G +F + P G + TR+G F Sbjct: 64 TSPSAVGTGVRVVSTEKLYTQGSLANTDNALDLAIDGPGFFQVLMPDGRMGYTRNGTFSQ 123 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDMSQ 167 +G++ + SG ++ + V + + + M L + + Sbjct: 124 NAEGTITTPSGYVVQPEIQIPEGAVSVTISSDGIVSVLMPDETEAQEVGQMTLATFANPR 183 Query: 168 GFVRR------ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221 G E + P+E + +G LE SN N + E+ MI + + Sbjct: 184 GLQPVGETFAVETGASGEAVIGNPVEPG-FGKLVQGSLEASNVNVVQELVDMIETQRAYE 242 Query: 222 SITTLIDENEKSMLEAIRNI 241 + I +++ M + Sbjct: 243 VNSKSISASDEMMQYLSNKL 262 >gi|332296516|ref|YP_004438439.1| flagellar basal-body rod protein FlgG [Thermodesulfobium narugense DSM 14796] gi|332179619|gb|AEE15308.1| flagellar basal-body rod protein FlgG [Thermodesulfobium narugense DSM 14796] Length = 262 Score = 168 bits (424), Expect = 8e-40, Method: Composition-based stats. Identities = 39/257 (15%), Positives = 83/257 (32%), Gaps = 19/257 (7%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + + ++ + + +N++N +T GF+T + +F +++ Sbjct: 1 MRALWTAASGMISQTTNVDVITNNLANVNTTGFKTARAEFEDLMYQEVRPAGATSASGNM 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFK 107 + G TG +LD A++GD +F + P TR G F Sbjct: 61 LPTGLEIGLGSRPVATVRIFTEGPLQQTGNQLDLAIQGDGFFQVTLPDGSTAYTRAGNFS 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 + G +V+ G + + + + T+ L Sbjct: 121 LDSAGEIVTPEGYLLQPSIVVPTNAVSISVGKDGSVSAKMQDGTVQDLGTIQLARFINPS 180 Query: 168 GFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNS 222 G ++ + T V++G LE SN + EM +I + + S Sbjct: 181 GLTSLGSNLYQSTPASGDAILGTPGTQGIGWVEQGMLEMSNVQVVEEMVNLITAERAYES 240 Query: 223 ITTLIDENEKSMLEAIR 239 + ++ + +A Sbjct: 241 CAKGMTVCDQMLSDANN 257 >gi|224825166|ref|ZP_03698272.1| flagellar basal-body rod protein FlgG [Lutiella nitroferrum 2002] gi|224602837|gb|EEG09014.1| flagellar basal-body rod protein FlgG [Lutiella nitroferrum 2002] Length = 260 Score = 168 bits (424), Expect = 8e-40, Method: Composition-based stats. Identities = 52/259 (20%), Positives = 92/259 (35%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + I + + +L V++N++N++T GF+ F ++ Sbjct: 1 MMRALYIAKTGMDSSQFQLDVVSNNLANSNTKGFKKGHAVFEDLYYQTLRQPGSQLTNGN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + G+ ST LD A+ GD +F ++ P I TR+G F Sbjct: 61 SLPTGLQVGTGSTVVATARIHSQGNLESTEQPLDLAINGDGFFRVQQPDGTIAYTRNGEF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 + ++G +V++SG + E V S T+ L + Sbjct: 121 RRNENGDIVNSSGYLLDPAINIPANATGITISEAGVVQYTQPNSTAPTTAGTIQLTTFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 QG + +D +V+ GFLEDSN N E+ MI + F Sbjct: 181 PQGLQSIGQNLYLQTQASGDPQDGDPNTDGRGSVRSGFLEDSNVNVTEELVNMITAQRSF 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + I ++ + + Sbjct: 241 EMNSRAIKTADEMLQRIAQ 259 >gi|167909129|ref|ZP_02496220.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei 112] Length = 262 Score = 168 bits (424), Expect = 8e-40, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 90/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + ++ +++N++N T GF+ + F +++ Sbjct: 1 MNRSLYIAATGMNAQQAQMDVISNNLANVSTNGFKGSRAVFEDLLYQTVRQPGANSTQQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V GS TG D A+ G +F + P G TRDG F Sbjct: 61 ELPSGLQLGTGVQQVATERLYTQGSLQQTGNSKDVAINGPGFFQVLMPDGTNAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQKGKVIATMGLYSVDM 165 + G LV++SG + + V + S I + + + Sbjct: 121 QTNAQGQLVTSSGYQVIPAITIPQNANSLTIGSDGVVSVTQPGSNNAVQIGALQIATFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + T+K+G++E SN N + E+ MI + + Sbjct: 181 PAGLDAKGENLFAETTSSGAPNVSQPGLNGAGTLKQGYVESSNVNVVQELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + Sbjct: 241 EINSKAVTTSDQMLQTVTQ 259 >gi|302878278|ref|YP_003846842.1| flagellar basal-body rod protein FlgG [Gallionella capsiferriformans ES-2] gi|302581067|gb|ADL55078.1| flagellar basal-body rod protein FlgG [Gallionella capsiferriformans ES-2] Length = 260 Score = 168 bits (424), Expect = 8e-40, Method: Composition-based stats. Identities = 47/259 (18%), Positives = 91/259 (35%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + ++ T+A+N++N T GF+ + F +++ Sbjct: 1 MIRSLWISKTGLDAQQTQMDTIANNLANVSTNGFKRSRAVFEDLLYQTIRQPGAQSSQQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+ TG +LD A+ G +F + P TRDG F Sbjct: 61 QIPSGLQIGTGVRPVAAERIHTQGNLQQTGNQLDVAINGSGFFQVLMPDGSTGYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 + G +V+ASG ++ I V + +M + + Sbjct: 121 QRDAQGQMVTASGFPVQPAISLPANAITVTIGRDGVVSVTQPGVAAPVQVGSMQVTTFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + T + + ++E SN N + EM MI + + Sbjct: 181 PAGLMAQGENLYQETASSGTPSTNVPGTNGSGLLSQNYVETSNVNVVEEMVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + I +++ + + + Sbjct: 241 EINSKSITTSDQMLQKLSQ 259 >gi|297183134|gb|ADI19277.1| flagellar basal body rod protein [uncultured delta proteobacterium HF0200_39L23] Length = 262 Score = 168 bits (424), Expect = 9e-40, Method: Composition-based stats. Identities = 47/259 (18%), Positives = 92/259 (35%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + A ++ + T A+N++N +T G++ KV F +++ + Sbjct: 1 MMRALYTAATGMAAQQRNIDTTANNLANVNTSGYKKSKVHFQDLLYHNERTAGVPSSVST 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 V G+ +TG +LD +++G +F + P GI+ +RDG F Sbjct: 61 QVPVGLHVGHGVKFIGTEKIHTQGNLENTGNDLDISIDGHGFFQILQPNGIVGYSRDGHF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 + G LV+ G ++ + + V + I ++ L Sbjct: 121 NIDGMGRLVTNDGMLLDPEINIPQDTRKIEVGFDGTVTVFLRDETMPEAIGSVQLARFQN 180 Query: 166 SQGFVRRENSGISP-----NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + N S ++ +GFLE SN + + EM MI + + Sbjct: 181 PAGLTPIGKNLYVSTPASGNAIVDAPGANSMGSLTQGFLERSNVSLVEEMVNMITSQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + I ++ + Sbjct: 241 EVNSKAIQSADEMLKNTNN 259 >gi|237799211|ref|ZP_04587672.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv. oryzae str. 1_6] gi|330961201|gb|EGH61461.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv. maculicola str. ES4326] gi|331022066|gb|EGI02123.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv. oryzae str. 1_6] Length = 262 Score = 168 bits (424), Expect = 9e-40, Method: Composition-based stats. Identities = 44/262 (16%), Positives = 97/262 (37%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + L+T+++N++N T GF++ + +F +++ IK Sbjct: 1 MLPALYVAKTGLAAQDTNLTTISNNLANVSTTGFKSDRAEFQDLLYQIKRQPGAQSTQDS 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V + GS +T LD A+ G +F + P G +RDG F Sbjct: 61 ELPSGLQLGTGVRIVGTQKNFTAGSLQTTNNPLDLAVNGRGFFQVTQPDGTVAYSRDGTF 120 Query: 107 KVTDDGSLVSASGK--YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 + +G +V+A+G P + + + + ++I + Sbjct: 121 HLDANGQIVTANGYALEPAIVVPQAAQTFTVGQDGTVSVTLAGATATPQIIGNIQTADFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQK 219 G + + + + LE+SN +++ E+ MI + Sbjct: 181 NPAGLQAIGGNLYLETGSSGAPQIGTPGLNGLGPTLQNTLENSNVSTVEELVNMITTQRA 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I ++ + +N+ Sbjct: 241 YEMNSKVISTADQMLQNLTQNL 262 >gi|153837069|ref|ZP_01989736.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus AQ3810] gi|149749657|gb|EDM60402.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus AQ3810] Length = 261 Score = 167 bits (423), Expect = 9e-40, Method: Composition-based stats. Identities = 44/255 (17%), Positives = 95/255 (37%), Gaps = 20/255 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M ++ + A + +++ +++N++N +TVGF+ +V F ++ +I+ Sbjct: 1 MHSALWVSKTGMAAQDTKMTVISNNLANVNTVGFKRDRVVFEDLFYSIQRQPGAQVDQVN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106 Q S V G+ +T +LD A+ G +F +E+ I+ TR+G+F Sbjct: 61 ELPSGVQLGSGVRVVGTQKVFTQGNTQNTTQDLDLAVMGQGFFQIENSDGQIMYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQI-PQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 + +G +V++ G + V + + + L Sbjct: 121 HINSEGLMVNSQGLPLEPQIQIPDNATSFSVGVDGTVTTTTADDPTPQQLGQITLAKFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + P ++ ++K+G LE SN + EM MI + + Sbjct: 181 PAGLEAVGGNLFRETEASGPADELIAGADGAGSIKQGALEGSNVQVVEEMVDMITTQRAY 240 Query: 221 NSITTLIDENEKSML 235 ++ + + Sbjct: 241 EMNAKVVSAADDMLK 255 >gi|319781681|ref|YP_004141157.1| flagellar basal-body rod protein FlgG [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167569|gb|ADV11107.1| flagellar basal-body rod protein FlgG [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 262 Score = 167 bits (423), Expect = 9e-40, Method: Composition-based stats. Identities = 42/262 (16%), Positives = 90/262 (34%), Gaps = 21/262 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + I A + L +A+N++N +T G++ + +FS+++ + Sbjct: 1 MKALAIAATGMNAQQTNLEVIANNIANINTTGYKRARAEFSDLLYQVDRTQGVPNRSNAS 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRF 106 V + G STG D AL G WF +E + G + +R G Sbjct: 61 LVPEGVSIGLGVKTTAVRNVHTQGELTSTGNSFDLALTGRGWFQIEGADGGTLYSRAGAL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE-KGEISQKGKVIATMGLYSVDM 165 G LV+ G + + + + + + + + + + Sbjct: 121 NTNATGQLVTVDGAAVIPAINVPVDAVEVIVNKTGQVFARIDGQTDLQNLGQLQIANFAN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ P T+++G+LE SN + + E+ ++I + + Sbjct: 181 EAGLAPLGDNLFQETTASGPANVGVPGDPGFATIQQGYLEASNVDPVKEITELISAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNIA 242 + +I + +NI Sbjct: 241 EMNSKVIQAADDMASVVSKNIR 262 >gi|242309754|ref|ZP_04808909.1| flagellar basal body rod protein FlgG [Helicobacter pullorum MIT 98-5489] gi|239523755|gb|EEQ63621.1| flagellar basal body rod protein FlgG [Helicobacter pullorum MIT 98-5489] Length = 263 Score = 167 bits (423), Expect = 9e-40, Method: Composition-based stats. Identities = 46/262 (17%), Positives = 101/262 (38%), Gaps = 23/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + L + ++ ++N+SN +T G+R + +F+++ + Sbjct: 1 MMRALYTATTGMLGQQLQIDVTSNNISNVNTFGYRKERAEFADLFHQVLQYAGSSTSETT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 V G+F T LD A+ G+ +F +E P I TRDG F Sbjct: 61 LSPTGIEVGLGVRPTSVQKIFSQGNFKETENNLDIAITGNGFFQIELPDGTIAYTRDGSF 120 Query: 107 KVTDDGSLVSASGK--YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 K+ D+G++V++ G P + + Q+ + +G ++ + + + + Sbjct: 121 KLDDEGNVVNSQGYLLVPNITIPDDATQVNIGTDGTVTVVQGNETEVNE-LGQIETVNFI 179 Query: 165 MSQGFVRRENSGI-SPNIPPTP----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G ++ + N P +++GF+E SN + EM +I + Sbjct: 180 NPAGLHALGDNLYLNTNASGDPIVGTPGLNGFGQLRQGFVETSNVKLVEEMTDLIVGQRA 239 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + + I + + + + + Sbjct: 240 YEANSKSIQTADSML-QIVNQL 260 >gi|77918760|ref|YP_356575.1| flagellar basal body rod protein FlgG [Pelobacter carbinolicus DSM 2380] gi|77544843|gb|ABA88405.1| flagellar biosynthesis protein [Pelobacter carbinolicus DSM 2380] Length = 261 Score = 167 bits (423), Expect = 9e-40, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 87/261 (33%), Gaps = 21/261 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + A + + +A N++N ++ GF+ + F +++ Sbjct: 1 MIRALWTSATGMEAQQVNMDVIAHNLANVNSAGFKKSRADFQDILYQTVKVAGSDGSSGV 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRF 106 Q G F TG +LD A+EG +F + + TR G F Sbjct: 61 EQPTSIQVGLGSRVAAIQKVFTTGDFQQTGNDLDIAIEGSGFFEITLANGDTAYTRAGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEK-GEISQKGKVIATMGLYSVDM 165 K G +V++ G ++ + E + I T+ L Sbjct: 121 KKDGTGRIVTSDGYPLSPEIIIPENATQVSIGNYGAVEVLLDGQNTPTQIGTITLTRFSN 180 Query: 166 SQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ + + ++ +GFLE SN + M EM MI + + Sbjct: 181 PAGLNSIGHNLFTETPTTGTPVTGNPGEDGFGSLSQGFLEGSNVSIMEEMVNMIAGQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + I ++ + + N+ Sbjct: 241 EINSKAIKTADEML-QMTNNL 260 >gi|158321569|ref|YP_001514076.1| hypothetical protein Clos_2549 [Alkaliphilus oremlandii OhILAs] gi|158141768|gb|ABW20080.1| protein of unknown function DUF1078 domain protein [Alkaliphilus oremlandii OhILAs] Length = 264 Score = 167 bits (423), Expect = 9e-40, Method: Composition-based stats. Identities = 50/264 (18%), Positives = 103/264 (39%), Gaps = 24/264 (9%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + + A + + T+++N++N +T G++ KV+F +++ A + Sbjct: 1 MRALWTAASGMKAQQLNMDTISNNLANVNTTGYKKQKVEFKDLLYANMRTTNLVDGEGSP 60 Query: 54 ---QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVT 109 Q V G+ T D A+ G+ +F +E+P G TRDG FK++ Sbjct: 61 VNLQVGHGVMPVATTRLFTTGNLERTDNPFDMAINGEGFFVIEAPSGDRFYTRDGNFKLS 120 Query: 110 DDG--SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG-----KVIATMGLYS 162 +G + S Y V+ I + V G I+ + + IAT+ L + Sbjct: 121 VEGDEMRLVTSDGYTVVSEFEDAIYFDGTMKEITVNANGLITAETEDGEIEEIATIALAN 180 Query: 163 VDMSQGFVRRENSGISPNIPP----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 +G + + + E+ + + +LE SN + EM ++I + Sbjct: 181 FINPEGLLAVGKNLYKETVASGEAVFMEEEARTSDIVQNYLETSNVQIVDEMVRLITAQR 240 Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242 + + I +++ + N+ Sbjct: 241 AYEINSKAIQTSDEMLG-IANNLR 263 >gi|157160605|ref|YP_001457923.1| flagellar basal body rod protein FlgG [Escherichia coli HS] gi|170020526|ref|YP_001725480.1| flagellar basal body rod protein FlgG [Escherichia coli ATCC 8739] gi|312971215|ref|ZP_07785393.1| flagellar basal-body rod protein FlgG [Escherichia coli 1827-70] gi|157066285|gb|ABV05540.1| flagellar basal-body rod protein FlgG [Escherichia coli HS] gi|169755454|gb|ACA78153.1| flagellar basal-body rod protein FlgG [Escherichia coli ATCC 8739] gi|310336417|gb|EFQ01603.1| flagellar basal-body rod protein FlgG [Escherichia coli 1827-70] Length = 260 Score = 167 bits (423), Expect = 9e-40, Method: Composition-based stats. Identities = 41/259 (15%), Positives = 88/259 (33%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M +S I A + + +A+N++N T G++ + F +++ Sbjct: 1 MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGYKRQRAVFEDLLYQTIRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+ T D A++G +F + P TRDG F Sbjct: 61 TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGSSAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V +G LV+A G + + V + + + L + Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + + +G++E SN N E+ MI + + + Sbjct: 181 DTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + ++ + + + Sbjct: 241 EINSKAVSTTDQMLQKLTQ 259 >gi|260767925|ref|ZP_05876859.1| flagellar basal-body rod protein FlgG [Vibrio furnissii CIP 102972] gi|260615955|gb|EEX41140.1| flagellar basal-body rod protein FlgG [Vibrio furnissii CIP 102972] gi|315179628|gb|ADT86542.1| flagellar basal-body rod protein FlgG [Vibrio furnissii NCTC 11218] Length = 261 Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats. Identities = 44/261 (16%), Positives = 100/261 (38%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M ++ + A + +++ +++N++N +TVGF+ +V F ++ +I+ Sbjct: 1 MHSALWVSKTGMAAQDTKMTAISNNLANVNTVGFKRDRVVFEDLFYSIQRQPGAQVDQVN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106 Q S V G+ +TG +LD A+ G +F +E+ I+ +R+G+F Sbjct: 61 ELPTGVQLGSGVRVVGTQKVFTQGNTQNTGQDLDLAVMGQGFFQIENSDGQIMYSRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ-KGKVIATMGLYSVDM 165 V +G +V++ G + I + + + + + L Sbjct: 121 HVNSEGLMVNSQGLPLQPQIQVPDDAISLSVGVDGTVTITTAADSTPQELGQITLAKFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + ++ ++K+G LE SN + EM MI + + Sbjct: 181 PAGLEALGGNLFRETEASGAADELIAGEDGVGSIKQGVLEGSNVQVVEEMVDMITTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 ++ + + +++ Sbjct: 241 EMNAKVVSAADDMLKFVAQSV 261 >gi|330899406|gb|EGH30825.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv. japonica str. M301072PT] Length = 262 Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats. Identities = 44/262 (16%), Positives = 96/262 (36%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + L+T+++N++N T GF++ + +F +++ IK Sbjct: 1 MLPALYVAKTGLAAQDTNLTTISNNLANVSTTGFKSDRAEFQDLLYQIKRQPGAQSTQDS 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V GS +T LD A+ G +F + P I +RDG F Sbjct: 61 ELPSGLQLGTGVRIVGTQKKFTAGSLQTTNNPLDLAVNGRGFFQVTQPDGTIAYSRDGTF 120 Query: 107 KVTDDGSLVSASGK--YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 + +G +V+A+G P + + + + ++I + Sbjct: 121 HLDANGQIVTANGYALEPAIVVPQNAQTFTVGQDGTVSVTLAGATATPQIIGNIQTADFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQK 219 G + + + + LE+SN +++ E+ MI + Sbjct: 181 NPAGLQAMGGNLYLETGSSGAPQIGTPGLNGLGPTLQNTLENSNVSTVEELVNMITTQRA 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I ++ + +N+ Sbjct: 241 YEMNSKVISTADQMLQNLTQNL 262 >gi|110632662|ref|YP_672870.1| flagellar basal body rod protein FlgF [Mesorhizobium sp. BNC1] gi|110283646|gb|ABG61705.1| flagellar basal body rod protein [Chelativorans sp. BNC1] Length = 239 Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats. Identities = 91/243 (37%), Positives = 144/243 (59%), Gaps = 4/243 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 MQT + L++Q+ALE+RL+T+ADN++N TVGFR + FS+V+ + + +SFV+ Sbjct: 1 MQTGLYVALSSQMALERRLATLADNVANAGTVGFRAGGITFSDVMSGLSEEA---VSFVS 57 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 +G + G TG+ DFA++GDAWFA+E+P G ++TRDGRF + + G LV+ G Sbjct: 58 TGSNFYDTRAGGLRETGSPFDFAVQGDAWFAVETPAGPVMTRDGRFTMRETGELVTLEGH 117 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 LD P+ + + G G + Q G++I +GL+S R NSG P+ Sbjct: 118 AV-LDAGGAPLVLDPQAGPPEAGADGILRQNGQLIGAIGLFSFTPGPNATRFGNSGFLPD 176 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 P P+ D V + +GFLEDSN N + EM ++I + + F +T L+ +++ SM +AI+ Sbjct: 177 TRPQPVVDQPDVGIAQGFLEDSNVNPVNEMMRLIQVQRTFEQVTALMRDSDTSMKDAIQA 236 Query: 241 IAS 243 + S Sbjct: 237 MGS 239 >gi|293414371|ref|ZP_06657020.1| flagellar basal-body rod protein FlgG [Escherichia coli B185] gi|291434429|gb|EFF07402.1| flagellar basal-body rod protein FlgG [Escherichia coli B185] Length = 260 Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats. Identities = 41/259 (15%), Positives = 87/259 (33%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + I A + + +A+N++N T GF+ + F +++ Sbjct: 1 MISLLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+ T D A++G +F + P TRDG F Sbjct: 61 TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGSSAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V +G LV+A G + + V + + + L + Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + + +G++E SN N E+ MI + + + Sbjct: 181 DTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + ++ + + + Sbjct: 241 EINSKAVSTTDQMLQKLTQ 259 >gi|154253004|ref|YP_001413828.1| flagellar basal body rod protein [Parvibaculum lavamentivorans DS-1] gi|154156954|gb|ABS64171.1| flagellar basal body rod protein [Parvibaculum lavamentivorans DS-1] Length = 256 Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats. Identities = 67/245 (27%), Positives = 133/245 (54%), Gaps = 6/245 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG--AIKNDIDQKISF 58 M+ + IGL+ Q+A+ + ++T+A+N++N +T +++ + F E + A ++ D I F Sbjct: 14 MENALLIGLSRQMAMSREMATIANNIANMNTTAYKSEAMLFEEFLAKDASEDSPDSTIRF 73 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSAS 118 V ++ + G+ +TG D A+ G+ +F +E+ +G++ TR+G F++ DG LV+++ Sbjct: 74 VQDVGQHRNLRDGALQTTGNPFDVAITGEGFFRVETGQGVLYTRNGNFQLDADGQLVTSN 133 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178 G P+L A PI + + + G IS + + + + + Q + NS +S Sbjct: 134 GD-PILTDAGTPITFARDEIGITIARDGTISSDRGLRGKLAIVTFENQQEMRKAGNSLLS 192 Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 P E+ + + +G LE SN N + EM MI +T+ + S LID+ ++ +AI Sbjct: 193 TAQEEVPAEN---IRLVQGALEGSNVNPILEMTNMIEVTRSYASAQKLIDQADQMRRKAI 249 Query: 239 RNIAS 243 +++ + Sbjct: 250 QDLGA 254 >gi|332531620|ref|ZP_08407517.1| flagellar basal-body rod FlgG [Hylemonella gracilis ATCC 19624] gi|332038983|gb|EGI75412.1| flagellar basal-body rod FlgG [Hylemonella gracilis ATCC 19624] Length = 259 Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats. Identities = 45/256 (17%), Positives = 93/256 (36%), Gaps = 19/256 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M S I A +++L T+++N++N+ T GF+ V F +++ S Sbjct: 1 MFNSLWIAKTGMEAQQRQLDTISNNLANSSTNGFKRSSVVFEDLMYQNLRTAGSPSSEQT 60 Query: 61 SGKE------------YLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFK 107 + + G LD A+ G+ +F + P G TRDG + Sbjct: 61 NLPTGLQVGLGARAVATSRNYTQGNLVQGRPLDVAINGNGFFQVSMPDGTTQYTRDGALE 120 Query: 108 VTDDGSLVSASGKYPVLD-MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 ++ G+LV+++G + + V K + I + L + Sbjct: 121 ISATGALVTSNGLPLADGIVIPPNASDLSIADDGTVTAKLPGQTVAQTIGNITLATFINP 180 Query: 167 QGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221 G + + + + + +G+LE SN N + E+ MI + + Sbjct: 181 AGLEAKGQNLFAETAASGTPNTGAPSANGIGKLMQGYLESSNVNVVQELVTMIQTQRAYE 240 Query: 222 SITTLIDENEKSMLEA 237 + I +++ + + Sbjct: 241 MNSKAIQTSDQMLQKL 256 >gi|148266116|ref|YP_001232822.1| flagellar basal body rod protein FlgG [Geobacter uraniireducens Rf4] gi|146399616|gb|ABQ28249.1| flagellar basal-body rod protein FlgG [Geobacter uraniireducens Rf4] Length = 262 Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats. Identities = 45/259 (17%), Positives = 89/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + + VA+N++N +T GF+ + F +++ Sbjct: 1 MIRALWTAASGMQAQQLNIDVVANNLANVNTTGFKKSRADFQDLMYQNLKTSGAPSTNAT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + G+ TG E+D A+EG+ +F ++ P +R G F Sbjct: 61 QIPTGIQVGLGSKAAAVSKIFTAGNITQTGNEMDLAIEGEGFFQIQMPDGSTNYSRAGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQKGKVIATMGLYSVDM 165 K G +V++ G + ++ + + T+ L + Sbjct: 121 KKDSQGRMVNSDGYPLLPEVIIPNNATKITVGNDGTVSVMQSGQNTPTSVGTIQLATFSN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ P T+ +GFLE SN + M EM MI + + Sbjct: 181 PAGLSSLGHNLYQPTDSSGAATTGTSGQNGIGTLSQGFLEMSNVSVMEEMVNMIVGQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + ++ + A Sbjct: 241 EINSKAVQAADEMLQTANN 259 >gi|330808197|ref|YP_004352659.1| flagellar basal-body rod protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327376305|gb|AEA67655.1| flagellar basal-body rod protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 261 Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats. Identities = 50/261 (19%), Positives = 96/261 (36%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + L+T+++N++N T GF+ + +F +++ +K Sbjct: 1 MLPALWVAKTGLSAQDTNLTTISNNLANVSTTGFKRDRAEFQDLLYQVKRQPGAQSTQDS 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 Q + V + GS +T LD A++G +F + P G TRDG F Sbjct: 61 ELPSGLQVGTGVRIVGTQKNFTAGSLQTTEQPLDMAIDGRGFFQILQPDGTTSYTRDGTF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 + +G +V+ASG + Q V + +VI + Sbjct: 121 HLDSNGQIVNASGFALEPAIIIPNDAQTFTVGRDGTVSITVAGNPASQVIGNLQTADFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G N+ + T + LE SN +++ EM MI + + Sbjct: 181 PAGLQAVGNNLFLETAASGAPQVGTPGLNGFGTTLQNTLETSNVSTVEEMVNMITTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + +I ++ + +N+ Sbjct: 241 EMNSKVISTADQMLSFVTQNL 261 >gi|307131607|ref|YP_003883623.1| flagellar basal-body rod protein flgG [Dickeya dadantii 3937] gi|306529136|gb|ADM99066.1| Flagellar basal-body rod protein flgG [Dickeya dadantii 3937] Length = 260 Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 85/259 (32%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + + +++N++N T GF+ + F +++ Sbjct: 1 MIRSLWIAKTGLNAQQTNMDVISNNLANVSTNGFKRQRAVFEDLMYQTVRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 Q + V GSF TG D A++G +F + P G TRDG F Sbjct: 61 TLPSGLQLGTGVRPVATERIHTQGSFSETGNVKDLAIKGAGFFQVLMPDGTTSYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 + +G LV++SG + V + I + L Sbjct: 121 QQDSNGQLVTSSGFQVQPAITIPANSSNLTVGRDGVVTVTQQGQTAPVQIGQLNLAMFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + + F+E SN N E+ MI + + Sbjct: 181 EAGLENLGENLYAETASSGAPTQSTPGLNGAGLIYQKFVETSNVNVAEELVSMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + I ++ + + + Sbjct: 241 EINSKAISSTDQMLQKLTQ 259 >gi|317121025|ref|YP_004101028.1| flagellar basal-body rod protein FlgF [Thermaerobacter marianensis DSM 12885] gi|315591005|gb|ADU50301.1| flagellar basal-body rod protein FlgF [Thermaerobacter marianensis DSM 12885] Length = 249 Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats. Identities = 47/250 (18%), Positives = 96/250 (38%), Gaps = 12/250 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIK---VKFSEVVGAIKN-----DI 52 M + LA + +A++++N +T G++ + F E+ A + Sbjct: 1 MLRGLYTAASGMLARVLQQERLANDLANVNTPGYKASRNVTEAFPELFVARLERAGAAPV 60 Query: 53 DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDG 112 + + L G ++ TG D AL GD +F + P G TR G F V +G Sbjct: 61 GPVGTGAVVAEPGLDLTAGPWLETGRPQDLALAGDGFFVVMGPAGPAYTRAGNFTVGPEG 120 Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172 L + G + + F V G++ G V+ T+ + + Sbjct: 121 YLQTPDGWPVLGTDGQP---LLVGTADFTVTPDGQVQAGGVVVGTVARVTFANPAALRKA 177 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 ++ + P + V++G LE SN + + + +M+ + F + + ++ Sbjct: 178 GDNLLVDPGGAGPAVPVDTP-VRQGVLEQSNVDPVRTVVEMLANFRAFEASQRAVQAQDQ 236 Query: 233 SMLEAIRNIA 242 ++ AI+ + Sbjct: 237 TLGLAIQEVG 246 >gi|221199741|ref|ZP_03572784.1| flagellar basal-body rod protein FlgG [Burkholderia multivorans CGD2M] gi|221208654|ref|ZP_03581654.1| flagellar basal-body rod protein FlgG [Burkholderia multivorans CGD2] gi|221171465|gb|EEE03912.1| flagellar basal-body rod protein FlgG [Burkholderia multivorans CGD2] gi|221179980|gb|EEE12384.1| flagellar basal-body rod protein FlgG [Burkholderia multivorans CGD2M] Length = 262 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 45/259 (17%), Positives = 90/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + ++ +++N++N T GF+ + F +++ Sbjct: 1 MNRSLYIAATGMNAQQAQMDVISNNLANVSTNGFKGSRAVFEDLLYQTIRQPGANSTQQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V GS TG D A+ G +F + P G TRDG F Sbjct: 61 ELPSGLQLGTGVQQVATERLYTQGSLTQTGNSKDVAINGSGFFQVLMPDGTNAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 + G LV++SG + + + V S I ++ + + Sbjct: 121 QTNAQGQLVTSSGYQILPAITVPQNATSLTIGKDGVVSVTQPGSSNAVQIGSLQIATFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + T+ +G++E SN N + E+ MI + + Sbjct: 181 PAGLEAKGENLFAETTSSGAPNVSQPGLNGAGTLNQGYVEASNVNVVQELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + Sbjct: 241 EINSKAVTTSDQMLQTVTQ 259 >gi|42526517|ref|NP_971615.1| flagellar basal-body rod protein FlgG [Treponema denticola ATCC 35405] gi|41816710|gb|AAS11496.1| flagellar basal-body rod protein FlgG [Treponema denticola ATCC 35405] Length = 270 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 55/266 (20%), Positives = 102/266 (38%), Gaps = 26/266 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTI---KVKFSEVVGAIKND------ 51 M + + LA +++L +++N++N DT F+ + F E++ ND Sbjct: 1 MVRGWYTAASGMLAQQRQLDVISNNLANLDTTSFKRDVSVQKSFPELLLRRLNDDGVIKN 60 Query: 52 ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101 I + V + + + E GS T + D ALEG +FA+E+P G T Sbjct: 61 PFGSSDIAPIIGKLGLGVETNEIFTEFEQGSLKQTSSPADLALEGQGFFAVETPYGEKYT 120 Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMA----SVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157 R+G F + +G L++ G + + +D V E + Sbjct: 121 RNGNFMIGVEGYLMTKEGYPVMGENGRIFLQDMEYKINQDGQIYVRPITEPESDSVYLDR 180 Query: 158 MGLYSVDMSQGFVRRENSGISPN---IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMI 214 + + + + + +S E S V +GF+E SN N + EM +MI Sbjct: 181 LKIVEFENDRYLSKNGSSFYLDTPLSGKAIAAEGPSRPVVVQGFIEASNVNVVNEMVRMI 240 Query: 215 HLTQKFNSITTLIDENEKSMLEAIRN 240 + + + + I + M + Sbjct: 241 EVNRAYEANQKSIQAEDTMMAKLWNE 266 >gi|302338304|ref|YP_003803510.1| flagellar basal-body rod protein FlgG [Spirochaeta smaragdinae DSM 11293] gi|301635489|gb|ADK80916.1| flagellar basal-body rod protein FlgG [Spirochaeta smaragdinae DSM 11293] Length = 264 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 51/258 (19%), Positives = 93/258 (36%), Gaps = 24/258 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S + + + T+++N+SN +T GF+ + F +++ Sbjct: 1 MMRSLWTAASGMTGQQFNIDTISNNLSNVNTTGFKKNRADFEDLLYQTSRVAGTPATELT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 V G+ +TG D A++GD +F + G +RDG F Sbjct: 61 TVPTGVQVGHGVKVAATQKMFTQGALQNTGNVTDLAIQGDGFFRVLLIDGSYGYSRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI---SQKGKVIATMGLYSV 163 K+ +G LV+++G + ++ I G + + + LY Sbjct: 121 KIDSNGQLVNSNGHRLIPEVVLPENFERDSLTISQDGRITVKVAGNDDPVQVGQLELYRF 180 Query: 164 DMSQGFVR------RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217 G + + IP P D G TV + FLE SN + + EM MI Sbjct: 181 VNPAGLSAIGQNNFKITNASGDAIPGRPGFDGMGQTV-QRFLEMSNVSVVQEMVNMIVAQ 239 Query: 218 QKFNSITTLIDENEKSML 235 + + + I ++ + Sbjct: 240 RAYELNSKAIQTSDTMLG 257 >gi|203288202|ref|YP_002223217.1| flagellar hook-basal body complex protein [Borrelia recurrentis A1] gi|201085422|gb|ACH94996.1| flagellar hook-basal body complex protein [Borrelia recurrentis A1] Length = 291 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 51/280 (18%), Positives = 103/280 (36%), Gaps = 38/280 (13%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKND------ 51 M + +A RL +A+N++N D G++ F E++ ND Sbjct: 10 MVRGIYTAASGMIAQRHRLEVIANNLANIDLTGYKKDLSVQKAFPEMLIRRTNDDGLYKF 69 Query: 52 ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101 + + + V + Y S E GS TG LD AL + +F +++P G T Sbjct: 70 PKGYLETAPVVGKLGTGVEENEIYTSFEQGSLKITGNPLDLALTEEGFFVVQTPEGERYT 129 Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV------- 154 R+G F + +G L++ G + + + I+ + + Sbjct: 130 RNGSFTLGREGILITKDGYPVIGEKGYIHIKDNNFKITEQGQIFHNSTFESNPKRLVSES 189 Query: 155 ---------IATMGLYSVDMSQGFVRRENSGISPNI---PPTPLEDLSGVTVKRGFLEDS 202 + + + + + ++ ++ +S + S ++ G LE S Sbjct: 190 ENSWENYELLDNLKIVNFEKARFLKKQGSSLWYSTEISGQAKNIPINSRPKIESGVLECS 249 Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 N N++ EM MI + + + + I + + + I I Sbjct: 250 NVNAINEMVSMITVNRVYEANQKTIQTEDTLLGKLINEIG 289 >gi|163803171|ref|ZP_02197054.1| putative flagellar basal-body rod protein [Vibrio sp. AND4] gi|159173071|gb|EDP57904.1| putative flagellar basal-body rod protein [Vibrio sp. AND4] Length = 261 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 99/261 (37%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M ++ + A + +++ +++N++N +TVGF+ +V F ++ +I+ Sbjct: 1 MHSALWVSKTGMAAQDTKMTAISNNLANVNTVGFKRDRVVFEDLFYSIQRQPGAQVDQVN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106 Q S V G+ +T ELD A+ G +F +E+ I+ TR+G+F Sbjct: 61 ELPSGVQLGSGVRVVGTQKVFTQGNTQNTTQELDLAVMGQGFFQIENSDGQIMYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 + +G +V++ G + I + V + + + L Sbjct: 121 HINSEGLMVNSQGLPLEPQIQIPDDAISFSVGVDGTVTTTSADDPNPQQLGQISLAKFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + ++ ++K+G LE SN + EM MI + + Sbjct: 181 PAGLEAVGGNLFRETAASGSADELIAGEDGAGSIKQGALEGSNVQVVEEMVDMITTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 ++ + + +++ Sbjct: 241 EMNAKVVSAADDMLKFVAQSM 261 >gi|260466619|ref|ZP_05812807.1| flagellar basal-body rod protein FlgG [Mesorhizobium opportunistum WSM2075] gi|259029625|gb|EEW30913.1| flagellar basal-body rod protein FlgG [Mesorhizobium opportunistum WSM2075] Length = 262 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 43/262 (16%), Positives = 91/262 (34%), Gaps = 21/262 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + I A + L +A+N++N +T G++ + +FS+++ + Sbjct: 1 MKALAIAATGMNAQQTNLEVIANNIANINTTGYKRARAEFSDLLYQVDRTQGVPNRSNAS 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRF 106 V + G STG D AL G WF +E + G + +R G F Sbjct: 61 LVPEGVSIGLGVKTTAVRNVHTQGELTSTGNSFDMALTGRGWFQIEGADGGTLYSRAGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE-KGEISQKGKVIATMGLYSVDM 165 G LV+ G + + + + + + + + + + Sbjct: 121 NTNATGQLVTVDGASVIPAINVPVDAVEVIVNKTGQVFARIDGQTDLQNLGQLQIANFAN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ P T+++G+LE SN + + E+ ++I + + Sbjct: 181 EAGLAPLGDNLFQETTASGPANVGVPGDPGFATIQQGYLEASNVDPVKEITELISAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNIA 242 + +I + +NI Sbjct: 241 EMNSKVIQAADDMASVVSKNIR 262 >gi|66046704|ref|YP_236545.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv. syringae B728a] gi|63257411|gb|AAY38507.1| Flagellar basal body rod protein:Protein of unknown function DUF1078 [Pseudomonas syringae pv. syringae B728a] Length = 262 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 44/262 (16%), Positives = 97/262 (37%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + L+T+++N++N T GF++ + +F +++ IK Sbjct: 1 MLPALYVAKTGLAAQDTNLTTISNNLANVSTTGFKSDRAEFQDLLYQIKRQPGAQSTQDS 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V + GS +T LD A+ G +F + P I +RDG F Sbjct: 61 ELPSGLQLGTGVRIVGTQKNFTAGSLQTTNNPLDLAVNGRGFFQVTQPDGTIAYSRDGTF 120 Query: 107 KVTDDGSLVSASGK--YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 + +G +V+A+G P + + + + ++I + Sbjct: 121 HLDANGQIVTANGYALEPAIVVPQNAQTFTVGQDGTVSVTLAGATATPQIIGNIQTADFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQK 219 G + + + + LE+SN +++ E+ MI + Sbjct: 181 NPAGLQAIGGNLYLETGSSGAPQIGTPGLNGLGPTLQNTLENSNVSTVEELVNMITTQRA 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I ++ + +N+ Sbjct: 241 YEMNSKVISTADQMLQNLTQNL 262 >gi|229591869|ref|YP_002873988.1| flagellar basal body rod protein FlgG [Pseudomonas fluorescens SBW25] gi|229363735|emb|CAY51140.1| flagellar basal-body rod protein [Pseudomonas fluorescens SBW25] Length = 261 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 49/261 (18%), Positives = 95/261 (36%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + L+T+++N++N T GF+ + +F +++ IK Sbjct: 1 MLPALWVAKTGLSAQDTNLTTISNNLANVSTTGFKRDRAEFQDLLYQIKKQPGAQSTQDS 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 Q + V + G+ TG LD A+ G +F + P G TRDG F Sbjct: 61 ELPSGLQLGTGVQIVGTQKNFSAGNLQQTGQPLDMAINGRGFFQILQPDGTTSYTRDGTF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 + +G +V+A+G + + V + +VI + Sbjct: 121 HLDSNGQIVTANGFALEPAVVVPADAKTFTVGNDGTVSITVAGNPASQVIGNLQTADFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G N+ + T + LE SN +++ EM MI + + Sbjct: 181 PAGLQAMGNNLFLETASSGAPQIGTPGLNGFGTTLQSTLETSNVSTVEEMVNMITTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + +I ++ + +N+ Sbjct: 241 EMNSKVISTADQMLSFVTQNL 261 >gi|315124200|ref|YP_004066204.1| flagellar basal-body rod protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315017922|gb|ADT66015.1| flagellar basal-body rod protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 263 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 40/262 (15%), Positives = 96/262 (36%), Gaps = 22/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S + +A + ++ ++N++N +T GF+ + +F++++ + Sbjct: 1 MMRSLHTAATGMVAQQTQIDVTSNNIANVNTAGFKKSRAEFADLMYQVMKYAGTSTSATT 60 Query: 56 ---------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGR 105 + + + E ++ LD A+ G+ +F ++ P G I TR+G+ Sbjct: 61 LSPSGIEVGVGVRPTAVTKVFTEGNLKSTSTDGLDMAIAGNGFFQIQLPDGTIGYTRNGQ 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVD 164 F ++G++V++ G + +M Q+ I + L Sbjct: 121 FTKDNEGNIVNSDGYRLLPEMTIPEGATAINVATDGTVSVMLPGEQQETQIGQVELVRFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G ++ T++ GF+E SN + EM +I + Sbjct: 181 NPAGLHSMGDNLYLETGASGAPVAGIAGQDGLGTIRHGFIELSNVQLVEEMTDLITGQRA 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + + I ++ + + + Sbjct: 241 YEAGSKAITTSDDMLG-IVNQL 261 >gi|157959900|ref|YP_001499934.1| flagellar basal-body rod protein FlgG [Shewanella pealeana ATCC 700345] gi|157844900|gb|ABV85399.1| flagellar basal-body rod protein FlgG [Shewanella pealeana ATCC 700345] Length = 261 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 46/261 (17%), Positives = 103/261 (39%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 MQ++ + A + +++T+A+N++N +T GF+ +V F+++ ++ Sbjct: 1 MQSALWVSKTGLTAQDTKMTTIANNLANVNTTGFKRDRVAFNDLFYQVQRQPGGQVDEQN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106 Q + G ++T +LD A+EG +F +E + TRDG+F Sbjct: 61 QLPAGLQLGTGTRVAGTQKVFTPGDMLTTNQQLDLAIEGQGFFQIEEANGDVSFTRDGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 DG +V++ G V ++ + V + + + + L + Sbjct: 121 YRDSDGLMVTSQGLPLVPNIQIPDEALTVTIASDGIVSAQMAGQADSQELGQITLVNFTN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G R ++ + + V++G LE +N N + EM +MI + + Sbjct: 181 PAGLEARGSNLYRETGASGAAIEGIAGDEALGQVRQGALEGANVNVVEEMVEMISTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 ++ ++ + + + Sbjct: 241 EMNAKVVSASDDMLKFLNQAL 261 >gi|167568109|ref|ZP_02361025.1| flagellar basal body rod protein FlgG [Burkholderia oklahomensis EO147] gi|167574227|ref|ZP_02367101.1| flagellar basal body rod protein FlgG [Burkholderia oklahomensis C6786] Length = 262 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 45/259 (17%), Positives = 90/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + ++ +++N++N T GF+ + F +++ Sbjct: 1 MNRSLYIAATGMNAQQSQMDVISNNLANVSTNGFKGSRAVFEDLLYQTVRQPGANSTQQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V G+ TG D A+ G +F + P G TRDG F Sbjct: 61 ELPSGLQLGTGVQQVATERLYTQGALQQTGNSKDVAINGQGFFQVLMPDGTNAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQKGKVIATMGLYSVDM 165 + G LV++SG + + V + S I + + + Sbjct: 121 QTNAQGQLVTSSGYQVIPAITIPQNATSLTIGSDGVVSVTQPGSNNAVQIGALQVATFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + T+K+G++E SN N + E+ MI + + Sbjct: 181 PAGLDAKGENLFAETTSSGQPNVSQPGLNGAGTLKQGYVEASNVNVVQELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + Sbjct: 241 EINSKAVTTSDQMLQTVTQ 259 >gi|83721615|ref|YP_440803.1| flagellar basal body rod protein FlgG [Burkholderia thailandensis E264] gi|167579490|ref|ZP_02372364.1| flagellar basal body rod protein FlgG [Burkholderia thailandensis TXDOH] gi|167617587|ref|ZP_02386218.1| flagellar basal body rod protein FlgG [Burkholderia thailandensis Bt4] gi|257140546|ref|ZP_05588808.1| flagellar basal body rod protein FlgG [Burkholderia thailandensis E264] gi|83655440|gb|ABC39503.1| flagellar basal-body rod protein FlgG [Burkholderia thailandensis E264] Length = 262 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 47/259 (18%), Positives = 90/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + ++ +++N++N T GF+ + F +++ Sbjct: 1 MNRSLYIAATGMNAQQAQMDVISNNLANVSTNGFKGSRAVFEDLLYQTVRQPGANSTQQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V GS TG D A+ G +F + P G TRDG F Sbjct: 61 ELPSGLQLGTGVQQVATERLYTQGSLTQTGNSKDVAINGQGFFQVLMPDGTNAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQKGKVIATMGLYSVDM 165 + G LV++SG + + V + S I + + + Sbjct: 121 QTNAQGQLVTSSGYQVIPAITIPQNATSLTIGSDGVVSVTQPGSNNAVQIGALQIATFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G R + + T+K+G++E SN N + E+ MI + + Sbjct: 181 PAGLDARGENLFAETTSSGAPNVSQPGLNGAGTLKQGYVEASNVNVVQELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + Sbjct: 241 EINSKAVTTSDQMLQTVTQ 259 >gi|28869144|ref|NP_791763.1| flagellar basal-body rod protein FlgG [Pseudomonas syringae pv. tomato str. DC3000] gi|71735047|ref|YP_275559.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv. phaseolicola 1448A] gi|213967579|ref|ZP_03395727.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv. tomato T1] gi|257484944|ref|ZP_05638985.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289627766|ref|ZP_06460720.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289651643|ref|ZP_06482986.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv. aesculi str. 2250] gi|298487853|ref|ZP_07005893.1| Flagellar basal-body rod protein flgG [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|301385716|ref|ZP_07234134.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv. tomato Max13] gi|302060071|ref|ZP_07251612.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv. tomato K40] gi|302134830|ref|ZP_07260820.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv. tomato NCPPB 1108] gi|302185580|ref|ZP_07262253.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv. syringae 642] gi|28852384|gb|AAO55458.1| flagellar basal-body rod protein FlgG [Pseudomonas syringae pv. tomato str. DC3000] gi|71555600|gb|AAZ34811.1| flagellar basal-body rod protein FlgG [Pseudomonas syringae pv. phaseolicola 1448A] gi|213927880|gb|EEB61427.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv. tomato T1] gi|298157578|gb|EFH98658.1| Flagellar basal-body rod protein flgG [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320325096|gb|EFW81165.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv. glycinea str. B076] gi|320329355|gb|EFW85348.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv. glycinea str. race 4] gi|330866425|gb|EGH01134.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330880529|gb|EGH14678.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv. glycinea str. race 4] gi|330986471|gb|EGH84574.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv. lachrymans str. M301315] gi|331011045|gb|EGH91101.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331017022|gb|EGH97078.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 262 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 44/262 (16%), Positives = 97/262 (37%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + L+T+++N++N T GF++ + +F +++ IK Sbjct: 1 MLPALYVAKTGLAAQDTNLTTISNNLANVSTTGFKSDRAEFQDLLYQIKRQPGAQSTQDS 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V + GS +T LD A+ G +F + P G +RDG F Sbjct: 61 ELPSGLQLGTGVRIVGTQKNFTAGSLQTTNNPLDLAVNGRGFFQVTQPDGTVAYSRDGTF 120 Query: 107 KVTDDGSLVSASGK--YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 + +G +V+A+G P + + + + ++I + Sbjct: 121 HLDANGQIVTANGYALEPAIVVPQNAQTFTVGQDGTVSVTLAGATATPQIIGNIQTADFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQK 219 G + + + + LE+SN +++ E+ MI + Sbjct: 181 NPAGLQAIGGNLYLETGSSGAPQIGTPGLNGLGPTLQNTLENSNVSTVEELVNMITTQRA 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I ++ + +N+ Sbjct: 241 YEMNSKVISTADQMLQNLTQNL 262 >gi|309779449|ref|ZP_07674210.1| flagellar basal-body rod protein FlgG [Ralstonia sp. 5_7_47FAA] gi|308921690|gb|EFP67326.1| flagellar basal-body rod protein FlgG [Ralstonia sp. 5_7_47FAA] Length = 260 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 92/259 (35%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + +L +++N++N +T GF+ + F +++ + Sbjct: 1 MIRSLWISKTGMDAQQSQLDVISNNLANVNTTGFKRSRAVFEDLLYQNVREPGAQSSQQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + G+ TG D A+ G+ +F ++ P G TRDG F Sbjct: 61 TLPSGMQIGTGTRIVATERLHTQGNLQQTGNSTDVAINGNGFFQVQMPDGTLAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 ++ G LV++SG + + V + + T L + Sbjct: 121 QINAQGQLVTSSGYPVQPAVTVPQNATSLTIGKDGVVTVTTPGTVNNTQVGTFQLANFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + + + ++E SN N + EM MI + + Sbjct: 181 PAGLRSMGENLYAETEASGTANLANPGSNGVGALNQNYVETSNVNVVEEMVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + + Sbjct: 241 EINSKSVQTSDQMLEKLSQ 259 >gi|218249387|ref|YP_002375274.1| flagellar hook-basal body complex protein [Borrelia burgdorferi ZS7] gi|221217927|ref|ZP_03589394.1| flagellar hook-basal body complex protein [Borrelia burgdorferi 72a] gi|224533400|ref|ZP_03673994.1| flagellar hook-basal body complex protein [Borrelia burgdorferi CA-11.2a] gi|225549985|ref|ZP_03770946.1| flagellar hook-basal body complex protein [Borrelia burgdorferi 118a] gi|218164575|gb|ACK74636.1| flagellar hook-basal body complex protein [Borrelia burgdorferi ZS7] gi|221192233|gb|EEE18453.1| flagellar hook-basal body complex protein [Borrelia burgdorferi 72a] gi|224513565|gb|EEF83922.1| flagellar hook-basal body complex protein [Borrelia burgdorferi CA-11.2a] gi|225369444|gb|EEG98896.1| flagellar hook-basal body complex protein [Borrelia burgdorferi 118a] Length = 282 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 105/280 (37%), Gaps = 38/280 (13%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51 M + +A ++L TV++N++N D +G++ F E++ ND Sbjct: 1 MVRGIYTAASGMMAERRKLDTVSNNLANIDLIGYKKDLSIQKAFPEMLIRRLNDDGLYKF 60 Query: 52 ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101 + + + V + Y E G +TG LD AL +F +++ G T Sbjct: 61 PKGHLETAPVVGKIGTGVEENEIYTVFEQGPLKTTGNPLDLALTDQGFFVIQTSDGERYT 120 Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI------------- 148 R+G F + +G LV+ SG + + + ++ Sbjct: 121 RNGSFTIGKEGILVTKSGFPVLGEKGYIYLKKNNFKITHQGQVFHNSNFESDPKRLVSEY 180 Query: 149 ---SQKGKVIATMGLYSVDMSQGFVRRENSGIS---PNIPPTPLEDLSGVTVKRGFLEDS 202 + +++ T+ + + + + ++ NS + ++ ++ LE S Sbjct: 181 ENSWENYELLDTIRIVNFENPRFLKKQGNSLWIDTKTSGKAQEIDISLRPKIETETLEAS 240 Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 N N++ EM MI + + + + I + + + I I Sbjct: 241 NVNAVKEMVLMIEINRAYEANQKTIQTEDSLLGKLINEIG 280 >gi|161526184|ref|YP_001581196.1| flagellar basal body rod protein FlgG [Burkholderia multivorans ATCC 17616] gi|189349100|ref|YP_001944728.1| flagellar basal body rod protein FlgG [Burkholderia multivorans ATCC 17616] gi|221215573|ref|ZP_03588536.1| flagellar basal-body rod protein FlgG [Burkholderia multivorans CGD1] gi|160343613|gb|ABX16699.1| flagellar basal-body rod protein FlgG [Burkholderia multivorans ATCC 17616] gi|189333122|dbj|BAG42192.1| flagellar basal-body rod protein [Burkholderia multivorans ATCC 17616] gi|221164561|gb|EED97044.1| flagellar basal-body rod protein FlgG [Burkholderia multivorans CGD1] Length = 262 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 45/259 (17%), Positives = 90/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + ++ +++N++N T GF+ + F +++ Sbjct: 1 MNRSLYIAATGMNAQQAQMDVISNNLANVSTNGFKGSRAVFEDLLYQTIRQPGANSTQQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V GS TG D A+ G +F + P G TRDG F Sbjct: 61 ELPSGLQLGTGVQQVATERLYTQGSLTQTGNSKDVAINGAGFFQVLMPDGTNAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 + G LV++SG + + + V S I ++ + + Sbjct: 121 QTNAQGQLVTSSGYQILPAITVPQNATSLTIGKDGVVSVTQPGSSNAVQIGSLQIATFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + T+ +G++E SN N + E+ MI + + Sbjct: 181 PAGLEAKGENLFAETTSSGAPNVSQPGLNGAGTLNQGYVEASNVNVVQELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + Sbjct: 241 EINSKAVTTSDQMLQTVTQ 259 >gi|227820852|ref|YP_002824822.1| flagellar basal body rod protein FlgF [Sinorhizobium fredii NGR234] gi|227339851|gb|ACP24069.1| Flagellar basal-body rod protein FlgF [Sinorhizobium fredii NGR234] Length = 241 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 109/242 (45%), Positives = 161/242 (66%), Gaps = 4/242 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 MQT + L++Q+ALE+RL+T+ADN++N +TVGFR+ +VKF +V+G K K+S+V+ Sbjct: 1 MQTGLYVALSSQMALEKRLNTLADNIANANTVGFRSTEVKFDQVLGDTK---PSKVSYVS 57 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 G+EYL+ G+ TG+ LDFA++G+AWF +++P G LTRDGRF +T+ G LV+ G Sbjct: 58 EGEEYLNTGNGALARTGSALDFAIKGNAWFNIDTPGGPALTRDGRFTLTETGELVTLKGY 117 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 PVLD PIQ+ VG G I Q G +A +GLY D S GFVR +NS + P Sbjct: 118 -PVLDAGGAPIQLNGGAGEITVGADGAIHQNGVQVALLGLYEADFSSGFVRYDNSAVMPA 176 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 P P+ D V V +GFLE+SN N++ EM Q+I +T+ F+++T L+ ++E S+ EAI+ Sbjct: 177 AQPEPVVDRFDVGVMQGFLEESNVNAVQEMTQLIMVTRAFDNVTALMRDSEGSLEEAIKT 236 Query: 241 IA 242 + Sbjct: 237 LG 238 >gi|188592119|ref|YP_001796717.1| flagellar basal body rod protein flgg [Cupriavidus taiwanensis LMG 19424] gi|170938493|emb|CAP63480.1| FlgG: Flagellar basal-body rod protein [Cupriavidus taiwanensis LMG 19424] Length = 261 Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 86/259 (33%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + ++ +++N++N T GF+ + F E++ Sbjct: 1 MIRSLWIAKTGLDAQQTQMDVISNNLANVSTNGFKRGRAVFEELMYQTIRQPGALSSDQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+ TG D A+ G +F + P TRDG F Sbjct: 61 TLPSGMQLGTGVRPVATERIHTQGNPQQTGNAKDVAILGQGFFQVALPDGTTAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V +G LV++SG + + V S + + L + Sbjct: 121 QVDQNGQLVTSSGFVIQPAITIPANTLSMTIGRDGTVSVTQPGSSANVQVGQLQLATFMN 180 Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + V++ ++E SN N + E+ MI + + Sbjct: 181 PAGLESMGENLYVQTDASGAPNTTVPGLNGAGVVQQNYVEASNVNVVEELVSMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + Sbjct: 241 EINSKAVQASDQMLQRLAQ 259 >gi|308050370|ref|YP_003913936.1| flagellar basal-body rod protein FlgG [Ferrimonas balearica DSM 9799] gi|307632560|gb|ADN76862.1| flagellar basal-body rod protein FlgG [Ferrimonas balearica DSM 9799] Length = 262 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 44/262 (16%), Positives = 96/262 (36%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 MQ + I A + ++T+++N++N TVG++ + F +++ N Sbjct: 1 MQPALWISKTGLDAQQTDIATISNNLANASTVGYKKSRAIFEDLLYQTINQAGGISSQNT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + G+ ++T LD +EG +F ++ P I +R+G+F Sbjct: 61 ELPAGLTLGAGTKVAATQRIFSQGNMLTTDNSLDLMIEGPGFFEIQLPDGTIAYSRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE--KGEISQKGKVIATMGLYSVD 164 + D+G LV+ + + VP + + + +VI + + + Sbjct: 121 ALDDEGQLVTPGAGFLLNPGIQVPEDAQSITVSGEGEVSVRVPGAAENQVIGQIEIANFV 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + T+++G LE SN N E+ MI + Sbjct: 181 NPTGLEPIGQNMFLETGASGAPIQGVPGLDGLGTLRQGALETSNVNVTEELVNMIESQRI 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I ++ + + + Sbjct: 241 YEMNSKVISTVDQMLANLNQQL 262 >gi|53717916|ref|YP_106902.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei K96243] gi|53724567|ref|YP_104800.1| flagellar basal body rod protein FlgG [Burkholderia mallei ATCC 23344] gi|67641540|ref|ZP_00440317.1| flagellar basal-body rod protein FlgG [Burkholderia mallei GB8 horse 4] gi|76808723|ref|YP_331881.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei 1710b] gi|121598854|ref|YP_994293.1| flagellar basal body rod protein FlgG [Burkholderia mallei SAVP1] gi|124386502|ref|YP_001028058.1| flagellar basal body rod protein FlgG [Burkholderia mallei NCTC 10229] gi|126439033|ref|YP_001057324.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei 668] gi|126450732|ref|YP_001082865.1| flagellar basal body rod protein FlgG [Burkholderia mallei NCTC 10247] gi|126454438|ref|YP_001064566.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei 1106a] gi|134283616|ref|ZP_01770315.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei 305] gi|167001539|ref|ZP_02267334.1| flagellar basal-body rod protein FlgG [Burkholderia mallei PRL-20] gi|167717662|ref|ZP_02400898.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei DM98] gi|167736705|ref|ZP_02409479.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei 14] gi|167813804|ref|ZP_02445484.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei 91] gi|167822320|ref|ZP_02453791.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei 9] gi|167843910|ref|ZP_02469418.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei B7210] gi|167892412|ref|ZP_02479814.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei 7894] gi|167900910|ref|ZP_02488115.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei NCTC 13177] gi|167917166|ref|ZP_02504257.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei BCC215] gi|217425015|ref|ZP_03456511.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei 576] gi|226199816|ref|ZP_03795367.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei Pakistan 9] gi|237810463|ref|YP_002894914.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei MSHR346] gi|242317698|ref|ZP_04816714.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei 1106b] gi|254175110|ref|ZP_04881771.1| flagellar basal-body rod protein FlgG [Burkholderia mallei ATCC 10399] gi|254182138|ref|ZP_04888735.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei 1655] gi|254196575|ref|ZP_04902999.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei S13] gi|254201898|ref|ZP_04908262.1| flagellar basal-body rod protein FlgG [Burkholderia mallei FMH] gi|254207232|ref|ZP_04913583.1| flagellar basal-body rod protein FlgG [Burkholderia mallei JHU] gi|254261052|ref|ZP_04952106.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei 1710a] gi|254295816|ref|ZP_04963273.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei 406e] gi|254359734|ref|ZP_04976005.1| flagellar basal-body rod protein FlgG [Burkholderia mallei 2002721280] gi|52208330|emb|CAH34263.1| flagellar basal-body rod protein [Burkholderia pseudomallei K96243] gi|52427990|gb|AAU48583.1| flagellar basal-body rod protein FlgG [Burkholderia mallei ATCC 23344] gi|76578176|gb|ABA47651.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei 1710b] gi|121227664|gb|ABM50182.1| flagellar basal-body rod protein FlgG [Burkholderia mallei SAVP1] gi|124294522|gb|ABN03791.1| flagellar basal-body rod protein FlgG [Burkholderia mallei NCTC 10229] gi|126218526|gb|ABN82032.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei 668] gi|126228080|gb|ABN91620.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei 1106a] gi|126243602|gb|ABO06695.1| flagellar basal-body rod protein FlgG [Burkholderia mallei NCTC 10247] gi|134245025|gb|EBA45120.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei 305] gi|147747792|gb|EDK54868.1| flagellar basal-body rod protein FlgG [Burkholderia mallei FMH] gi|147752774|gb|EDK59840.1| flagellar basal-body rod protein FlgG [Burkholderia mallei JHU] gi|148028948|gb|EDK86880.1| flagellar basal-body rod protein FlgG [Burkholderia mallei 2002721280] gi|157806194|gb|EDO83364.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei 406e] gi|160696155|gb|EDP86125.1| flagellar basal-body rod protein FlgG [Burkholderia mallei ATCC 10399] gi|169653318|gb|EDS86011.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei S13] gi|184212676|gb|EDU09719.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei 1655] gi|217392035|gb|EEC32061.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei 576] gi|225928167|gb|EEH24203.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei Pakistan 9] gi|237504504|gb|ACQ96822.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei MSHR346] gi|238522491|gb|EEP85935.1| flagellar basal-body rod protein FlgG [Burkholderia mallei GB8 horse 4] gi|242140937|gb|EES27339.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei 1106b] gi|243062740|gb|EES44926.1| flagellar basal-body rod protein FlgG [Burkholderia mallei PRL-20] gi|254219741|gb|EET09125.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei 1710a] Length = 262 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 90/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + ++ +++N++N T GF+ + F +++ Sbjct: 1 MNRSLYIAATGMNAQQAQMDVISNNLANVSTNGFKGSRAVFEDLLYQTVRQPGANSTQQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V GS TG D A+ G +F + P G TRDG F Sbjct: 61 ELPSGLQLGTGVQQVATERLYTQGSLQQTGNSKDVAINGQGFFQVLMPDGTNAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQKGKVIATMGLYSVDM 165 + G LV++SG + + V + S I + + + Sbjct: 121 QTNAQGQLVTSSGYQVIPAITIPQNANSLTIGSDGVVSVTQPGSNNAVQIGALQIATFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + T+K+G++E SN N + E+ MI + + Sbjct: 181 PAGLDAKGENLFAETTSSGAPNVSQPGLNGAGTLKQGYVESSNVNVVQELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + Sbjct: 241 EINSKAVTTSDQMLQTVTQ 259 >gi|237752808|ref|ZP_04583288.1| flagellar basal-body rod protein distal rod protein [Helicobacter winghamensis ATCC BAA-430] gi|229376297|gb|EEO26388.1| flagellar basal-body rod protein distal rod protein [Helicobacter winghamensis ATCC BAA-430] Length = 263 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 48/262 (18%), Positives = 99/262 (37%), Gaps = 23/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + L + ++ ++N+SN +T G+R + +F+++ + Sbjct: 1 MMRALYTATTGMLGQQLQIDVTSNNISNVNTFGYRKERAEFADLFHQVLQYAGSSTSETT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 V G+F T LD A+ G+ +F +E P I TRDG F Sbjct: 61 LSPTGIEVGLGVRPTAVQKIFSQGNFKETEQNLDVAITGNGFFQIELPDGTIAYTRDGSF 120 Query: 107 KVTDDGSLVSASGK--YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 K D+G++V+A G P + + QI + +G ++ + + + + Sbjct: 121 KRDDEGNVVNAQGYLLVPNITIPDDATQINIGKDGTVTVVQGNETEVNQ-LGQIETVNFI 179 Query: 165 MSQGFVRRENSGI-SPNIPPTP----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G ++ + N P + +GF+E SN + EM +I + Sbjct: 180 NPAGLHALGDNLYLNTNASGDPIVGTPGLNGFGQLAQGFVETSNVKLVEEMTDLIVGQRA 239 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + + I + + + + + Sbjct: 240 YEANSKSIQTADSML-QIVNQL 260 >gi|294500931|ref|YP_003564631.1| flagellar hook protein FlgE [Bacillus megaterium QM B1551] gi|294350868|gb|ADE71197.1| flagellar hook protein FlgE [Bacillus megaterium QM B1551] Length = 264 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 48/261 (18%), Positives = 89/261 (34%), Gaps = 22/261 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ + +L + +N++N +T G++ + F ++V Sbjct: 1 MLRSMYSGISGMKNFQTKLDVLGNNIANVNTYGYKKGRTTFQDLVSQQVAGATAPGANRG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 Q G + GS STG LD A+ GD +F + + TR G F + Sbjct: 61 GVNAKQVGLGSKIGTIDTVQTAGSIQSTGRPLDLAISGDGYFVVNDGKSDYYTRAGNFYL 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQI-----PQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 G+LV+ G Y V T+ L Sbjct: 121 DSSGNLVTGDGLYVQKTGGGNINIPSTSKSYSIGADGKVNIIDANGNITPNTPTIELAKF 180 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQ 218 ++G + + + ++ + T+ LE SN + E MI + Sbjct: 181 ANNEGLEKAGGNLFAKSVNSGNPLVGNPGASGTGTLVSSALEMSNVDLSEEFTDMIVAQR 240 Query: 219 KFNSITTLIDENEKSMLEAIR 239 F + T +I +++ + E + Sbjct: 241 GFQANTRIITTSDEILQELVN 261 >gi|2275161|gb|AAB81413.1| FlgG [Sinorhizobium meliloti] Length = 262 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 44/262 (16%), Positives = 91/262 (34%), Gaps = 21/262 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55 + +I A + L +A+N++N +T G++ + +FS+++ + Sbjct: 1 MKALSIAATGMNAQQLNLEVIANNIANINTTGYKRARAEFSDLLYQTERAQGVPNRSNQA 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 V + GS ++TG + D AL G WF +E+P + TR G F Sbjct: 61 IVPEGAIIGLGVQTSAVRNLHIQGSLVNTGNDYDLALVGRGWFQIETPDGETVYTRSGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 G LV+ G V + V + + + I + + + Sbjct: 121 NTNATGQLVTIDGYTVVPGVTVPQDATEIVFTSSGQVMVRIGNDTELQEIGQLTIANFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + +K+ +LE SN + + E+ +I + + Sbjct: 181 EAGLEPMGENLFRQTPASGDPIVGTPADPGFAQIKQNYLESSNVDPVKEITDLISAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNIA 242 + +I ++ +N+ Sbjct: 241 EMNSKIIQAADEMAATVSKNLR 262 >gi|15964415|ref|NP_384768.1| flagellar basal body rod protein FlgG [Sinorhizobium meliloti 1021] gi|307311557|ref|ZP_07591198.1| flagellar basal-body rod protein FlgG [Sinorhizobium meliloti BL225C] gi|307318912|ref|ZP_07598343.1| flagellar basal-body rod protein FlgG [Sinorhizobium meliloti AK83] gi|17380480|sp|Q52946|FLGG_RHIME RecName: Full=Flagellar basal-body rod protein flgG; AltName: Full=Distal rod protein gi|15073592|emb|CAC45234.1| Flagellar basal-body rod protein [Sinorhizobium meliloti 1021] gi|306895326|gb|EFN26081.1| flagellar basal-body rod protein FlgG [Sinorhizobium meliloti AK83] gi|306899574|gb|EFN30203.1| flagellar basal-body rod protein FlgG [Sinorhizobium meliloti BL225C] Length = 262 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 45/262 (17%), Positives = 91/262 (34%), Gaps = 21/262 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55 + +I A + L +A+N++N +T G++ + +FS+++ + Sbjct: 1 MKALSIAATGMNAQQLNLEVIANNIANINTTGYKRARAEFSDLLYQTERAQGVPNRSNQA 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 V + GS ++TG + D AL G WF +E+P + TR G F Sbjct: 61 IVPEGAIIGLGVQTSAVRNLHIQGSLVNTGNDYDLALVGRGWFQIETPDGETVYTRSGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 G LV+ G V + V + + + I + + + Sbjct: 121 NTNATGQLVTIDGYTVVPGVTVPQDATEIVFTSSGQVMVRIGNDTELQEIGQLTIANFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + VK+ +LE SN + + E+ +I + + Sbjct: 181 EAGLEPMGENLFRQTPASGDPIVGTPADPGFAQVKQNYLESSNVDPVKEITDLISAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNIA 242 + +I ++ +N+ Sbjct: 241 EMNSKIIQAADEMAATVSKNLR 262 >gi|325473455|gb|EGC76650.1| flagellar basal-body rod protein FlgG [Treponema denticola F0402] Length = 270 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 55/266 (20%), Positives = 102/266 (38%), Gaps = 26/266 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTI---KVKFSEVVGAIKND------ 51 M + + LA +++L +++N++N DT F+ + F E++ ND Sbjct: 1 MVRGWYTAASGMLAQQRQLDVISNNLANLDTTSFKRDVSVQKSFPELLLRRLNDDGVIKN 60 Query: 52 ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101 I + V + + + E GS T + D ALEG +FA+E+P G T Sbjct: 61 PFGSSDIAPIIGKLGLGVETNEIFTEFEQGSLKQTSSPADLALEGQGFFAVETPYGEKYT 120 Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMA----SVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157 R+G F V +G L++ G + + +D V + + Sbjct: 121 RNGNFMVGVEGYLMTKEGYPVMGENGRIFLQDMEYKINQDGQIYVRPITDPESDSVYLDR 180 Query: 158 MGLYSVDMSQGFVRRENSGISPN---IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMI 214 + + + + + +S E S V +GF+E SN N + EM +MI Sbjct: 181 LKIVEFENDRYLSKNGSSFYLDTPLSGRAIAAEGPSRPVVVQGFIEASNVNVVNEMVRMI 240 Query: 215 HLTQKFNSITTLIDENEKSMLEAIRN 240 + + + + I + M + Sbjct: 241 EVNRAYEANQKSIQAEDTMMAKLWNE 266 >gi|225551767|ref|ZP_03772710.1| flagellar hook-basal body complex protein [Borrelia sp. SV1] gi|225371562|gb|EEH00989.1| flagellar hook-basal body complex protein [Borrelia sp. SV1] Length = 282 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 105/280 (37%), Gaps = 38/280 (13%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51 M + +A ++L TV++N++N D +G++ F E++ ND Sbjct: 1 MVRGIYTAASGMMAERRKLDTVSNNLANIDLIGYKKDLSIQKAFPEILIRRLNDDGLYKF 60 Query: 52 ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101 + + + V + Y E G +TG LD AL +F +++ G T Sbjct: 61 PKGHLETAPVVGKLGTGVEENEIYTVFEQGPLKTTGNPLDLALTDQGFFVIQTSDGERYT 120 Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI------------- 148 R+G F + +G LV+ SG + + + ++ Sbjct: 121 RNGSFTIGKEGILVTKSGFPVLGEKGYIYLKKNNFKITPQGQIFHNSNFESDPKRLVSEY 180 Query: 149 ---SQKGKVIATMGLYSVDMSQGFVRRENSGIS---PNIPPTPLEDLSGVTVKRGFLEDS 202 + +++ T+ + + + + ++ NS + ++ ++ LE S Sbjct: 181 ENSWENYELLDTIRIVNFENPRFLKKQGNSLWIDTKTSGKAQEIDVSLRPKIETETLEAS 240 Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 N N++ EM MI + + + + I + + + I I Sbjct: 241 NVNAVKEMVLMIEINRAYEANQKTIQTEDSLLGKLINEIG 280 >gi|224532954|ref|ZP_03673563.1| flagellar hook-basal body complex protein [Borrelia burgdorferi WI91-23] gi|224512118|gb|EEF82510.1| flagellar hook-basal body complex protein [Borrelia burgdorferi WI91-23] Length = 282 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 105/280 (37%), Gaps = 38/280 (13%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51 M + +A ++L TV++N++N D +G++ F E++ ND Sbjct: 1 MVRGIYTAASGMMAERRKLDTVSNNLANIDLIGYKKDLSIQKAFPEMLIRRLNDDGLYKF 60 Query: 52 ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101 + + + V + Y E G +TG LD AL +F +++ G T Sbjct: 61 PKGHLETAPIVGKIGTGVEENEIYTVFEQGPLKTTGNPLDLALTDQGFFVIQTSDGERYT 120 Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI------------- 148 R+G F + +G LV+ SG + + + ++ Sbjct: 121 RNGSFTIGKEGILVTKSGFPVLGEKGYIYLKKNNFKITPQGQVFHNSNFESDPKRLVSEY 180 Query: 149 ---SQKGKVIATMGLYSVDMSQGFVRRENSGIS---PNIPPTPLEDLSGVTVKRGFLEDS 202 + +++ T+ + + + + ++ NS + ++ ++ LE S Sbjct: 181 ENSWENYELLDTIRIVNFENPRFLKKQGNSLWIDTKTSGKAQEIDISLRPKIETETLEAS 240 Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 N N++ EM MI + + + + I + + + I I Sbjct: 241 NVNAVKEMVLMIEINRAYEANQKTIQTEDSLLGKLINEIG 280 >gi|195941596|ref|ZP_03086978.1| flagellar hook-basal body complex protein (flhO) [Borrelia burgdorferi 80a] gi|216264480|ref|ZP_03436472.1| flagellar hook-basal body complex protein [Borrelia burgdorferi 156a] gi|226320635|ref|ZP_03796194.1| flagellar hook-basal body complex protein [Borrelia burgdorferi 29805] gi|215980953|gb|EEC21760.1| flagellar hook-basal body complex protein [Borrelia burgdorferi 156a] gi|226233958|gb|EEH32680.1| flagellar hook-basal body complex protein [Borrelia burgdorferi 29805] gi|312148084|gb|ADQ30743.1| flagellar hook-basal body complex protein [Borrelia burgdorferi JD1] gi|312149492|gb|ADQ29563.1| flagellar hook-basal body complex protein [Borrelia burgdorferi N40] Length = 282 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 105/280 (37%), Gaps = 38/280 (13%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51 M + +A ++L TV++N++N D +G++ F E++ ND Sbjct: 1 MVRGIYTAASGMMAERRKLDTVSNNLANIDLIGYKKDLSIQKAFPEMLIRRLNDDGLYKF 60 Query: 52 ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101 + + + V + Y E G +TG LD AL +F +++ G T Sbjct: 61 PKGHLETAPVVGKIGTGVEENEIYTVFEQGPLKTTGNPLDLALTDQGFFVIQTSDGERYT 120 Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI------------- 148 R+G F + +G LV+ SG + + + ++ Sbjct: 121 RNGSFTIGKEGILVTKSGFPVLGEKGYIYLKKNNFKITPQGQVFHNSNFESDPKRLVSEY 180 Query: 149 ---SQKGKVIATMGLYSVDMSQGFVRRENSGIS---PNIPPTPLEDLSGVTVKRGFLEDS 202 + +++ T+ + + + + ++ NS + ++ ++ LE S Sbjct: 181 ENSWENYELLDTIRIVNFENPRFLKKQGNSLWIDTKTSGKAQEIDISLRPKIETETLEAS 240 Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 N N++ EM MI + + + + I + + + I I Sbjct: 241 NVNAVKEMVLMIEINRAYEANQKTIQTEDSLLGKLINEIG 280 >gi|149189838|ref|ZP_01868118.1| putative flagellar basal-body rod protein [Vibrio shilonii AK1] gi|148836324|gb|EDL53281.1| putative flagellar basal-body rod protein [Vibrio shilonii AK1] Length = 261 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 46/261 (17%), Positives = 97/261 (37%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M ++ + A + +++ +++N++N +TVGF+ +V F ++ +I+ Sbjct: 1 MHSALWVSKTGMAAQDTKMTAISNNLANVNTVGFKRDRVVFEDLFYSIQRQPGAQVDQVN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106 Q S V GS +TG +LD A+ G +F +E+ I+ TR+G+F Sbjct: 61 QLPTGVQLGSGVRVVGTQKVFTQGSAQNTGQDLDLAVMGQGFFQIENSDGQIMYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-IATMGLYSVDM 165 V +G +V++ G + + + + + L Sbjct: 121 HVNSEGLMVNSQGLPLEPQIQIPDNALTLSVGVDGTVTATTADGPAPQDLGQITLAKFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + E + ++K+G LE SN + EM MI + + Sbjct: 181 PAGLEAIGGNLFKETEASGQAEELIAGEEGAGSIKQGALEGSNVQVVEEMVDMITTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 ++ + + + + Sbjct: 241 EMNAKVVSAADDMLKFVAQAV 261 >gi|126176154|ref|YP_001052303.1| flagellar basal-body rod protein FlgG [Shewanella baltica OS155] gi|304412506|ref|ZP_07394112.1| flagellar basal-body rod protein FlgG [Shewanella baltica OS183] gi|307307165|ref|ZP_07586903.1| flagellar basal-body rod protein FlgG [Shewanella baltica BA175] gi|125999359|gb|ABN63434.1| flagellar basal-body rod protein FlgG [Shewanella baltica OS155] gi|304349148|gb|EFM13560.1| flagellar basal-body rod protein FlgG [Shewanella baltica OS183] gi|306910404|gb|EFN40835.1| flagellar basal-body rod protein FlgG [Shewanella baltica BA175] Length = 261 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 105/261 (40%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 MQ++ + A + +++ +A+N++N +T GF+ +V F+++ ++ Sbjct: 1 MQSALWVSKTGLTAQDTKMTAIANNLANVNTTGFKRDRVAFNDLFYQVQRQPGGQVDALN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + G +T +LD A+EG +F +E P + TRDG+F Sbjct: 61 NLPSGLQLGAGTRVVGTQKIFTTGDMQNTSQQLDLAIEGHGFFQVEEPNGDLAYTRDGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 + +G +V++ G V ++ + V K + + + + L + Sbjct: 121 YRSSEGMMVTSQGLPLVPNIVIPEDALTVTIANDGVVTAKMAGEAEPQDLGQITLVNFTN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G R ++ + + +++G LE +N N + EM +MI + + Sbjct: 181 PAGLEARGDNLYRETAASGVAVEGVAGDQALGALRQGALEGANVNVVEEMVEMISTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 ++ ++ + +++ Sbjct: 241 EMNAKVVSASDDMLKFLNQSV 261 >gi|293605005|ref|ZP_06687401.1| flagellar basal-body rod protein FlgG [Achromobacter piechaudii ATCC 43553] gi|292816610|gb|EFF75695.1| flagellar basal-body rod protein FlgG [Achromobacter piechaudii ATCC 43553] Length = 261 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 40/260 (15%), Positives = 88/260 (33%), Gaps = 21/260 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I + + +++N++N T GF+ + F +++ Sbjct: 1 MMRSLWIAKTGLEGQQTSMDVISNNLANVSTNGFKRGRAVFQDLMYQTLRQPGAQVGDAT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 Q + G+ +TG E+D A+ G + +E P G TRDG Sbjct: 61 QLPSGLQLGTGARVAATERIHTAGNLNNTGGEMDIAINGRGFLQVELPDGTQGYTRDGAL 120 Query: 107 KVTDDGSLVSASGK--YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 + +G L + SG P +++ + I + + + I + + + Sbjct: 121 QRDQNGQLTTVSGYVIQPPMNVPDNALSISIGKDGIVSVTQPGAAGVNVQIGQLQIATFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + P ++ + ++E SN N E+ MI + Sbjct: 181 NPTGLQSIGENLYLETDASGPANLLQPGVDGAGSIMQNYVETSNVNVAEELVNMITTQRA 240 Query: 220 FNSITTLIDENEKSMLEAIR 239 + + + +++ + + Sbjct: 241 YEMNSKAVKTSDEMLARLTQ 260 >gi|149201611|ref|ZP_01878585.1| Flagellar distal rod protein [Roseovarius sp. TM1035] gi|149144659|gb|EDM32688.1| Flagellar distal rod protein [Roseovarius sp. TM1035] Length = 262 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 91/259 (35%), Gaps = 20/259 (7%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID--------- 53 ++ A + R+ +++N++N +T GF+ + F ++ Sbjct: 4 NVMHVAKTGLNAQQARIQVISNNLANVNTTGFKRDRANFETLLYQTLRPAGAQTSEATEQ 63 Query: 54 ----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKV 108 + V GS +T LD A++G +F + P I TR+G F Sbjct: 64 TAPTTLGTGVRLVSTEKMYTQGSLTTTDNALDLAIDGKGFFQVLMPDGRIGYTRNGTFSQ 123 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 DG L ++SG ++ P + + + + + + L + Sbjct: 124 NADGVLTTSSGYVVQPEIQIPPEATSISISRDGIISVTLPDAVEAEEVGQLTLAQFANPR 183 Query: 168 GFVRRENSGISPNIPPTPLEDLS-----GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222 G + + + + + +G LE SN N + E+ +MI + + Sbjct: 184 GLEPVGETFVVESTASGAPVVGNPLEDGMGDLVQGALETSNVNVVQELVEMIEAQRAYEI 243 Query: 223 ITTLIDENEKSMLEAIRNI 241 + I +++ M N+ Sbjct: 244 NSRSISASDEMMSYLANNL 262 >gi|167835113|ref|ZP_02461996.1| flagellar basal body rod protein FlgG [Burkholderia thailandensis MSMB43] Length = 262 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 90/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + ++ +++N++N T GF+ + F +++ Sbjct: 1 MNRSLYIAATGMNAQQAQMDVISNNLANVSTNGFKGSRAVFEDLLYQTVRQPGANSTQQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V GS TG D A+ G +F + P G TRDG F Sbjct: 61 ELPSGLQLGTGVQQVATERLYTQGSLQQTGNSKDVAINGQGFFQVLMPDGTNAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQKGKVIATMGLYSVDM 165 + G LV++SG + + V + S I + + + Sbjct: 121 QTNAQGQLVTSSGYQVIPAITMPQNATSLTIGSDGVVSVTQPGSNNAVQIGALQIATFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + T+K+G++E SN N + E+ MI + + Sbjct: 181 PAGLDAKGENLFAETTSSGAPNVSQPGLNGAGTLKQGYVESSNVNVVQELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + Sbjct: 241 EINSKAVTTSDQMLQTVTQ 259 >gi|296283228|ref|ZP_06861226.1| flagellar basal body rod protein FlgG [Citromicrobium bathyomarinum JL354] Length = 261 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 47/259 (18%), Positives = 103/259 (39%), Gaps = 21/259 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 S +I LA + + +++N++N +T GF+ + +F +++ + Sbjct: 1 MRSLSIAGTGMLAQQTNVDVISNNIANMNTTGFKRQRAQFQDLLYQQVSRPGASSAGPEA 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 Q + V +G Y E G+ + T D A++G +F ++ P G I TRDG F Sbjct: 61 RAPTGIQIGAGVRTGGVYRIAEQGALVQTDNRFDLAIQGLGYFQVQMPTGEIGYTRDGTF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 +++D G LV++ G + + V K + + + + L + Sbjct: 121 QLSDQGELVTSQGLVVEPGITIPQGAVDVAVSRTGEVQIKIAGETEMQTVGQIELATFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + ++ + +V +GF+E SN N + E+ +I + + Sbjct: 181 EAGLEAKGDNLFLATAASGEPTIAAPGEPGFGSVAQGFVEASNVNPVAEITALITAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + ++ ++ + + Sbjct: 241 EMNSRVVKTADEMLGTTSQ 259 >gi|194432508|ref|ZP_03064795.1| flagellar basal-body rod protein FlgG [Shigella dysenteriae 1012] gi|194419395|gb|EDX35477.1| flagellar basal-body rod protein FlgG [Shigella dysenteriae 1012] gi|332092914|gb|EGI97982.1| flagellar basal-body rod protein FlgG [Shigella dysenteriae 155-74] Length = 260 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 42/259 (16%), Positives = 88/259 (33%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M +S I A + + +A+N++N T GF+ + F +++ Sbjct: 1 MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + S G+ T D A++G +F + P TRDG F Sbjct: 61 TLPSGLQIGTGGRSVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGSSAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V +G LV+A G + + V + + + L + Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANALSISIGRDGVVSVTQQGQAAPVQVGQLNLTTFMN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + + +G++E SN N E+ MI + + + Sbjct: 181 DTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + ++ + + + Sbjct: 241 EINSKAVSTTDQMLQKLTQ 259 >gi|330502736|ref|YP_004379605.1| flagellar basal body rod protein FlgG [Pseudomonas mendocina NK-01] gi|328917022|gb|AEB57853.1| flagellar basal body rod protein FlgG [Pseudomonas mendocina NK-01] Length = 261 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 49/261 (18%), Positives = 99/261 (37%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + L+T+++N++N T GF+ + +F +++ I+ Sbjct: 1 MLPALWVSKTGLSAQDMNLTTISNNLANVATTGFKRDRAEFEDLLYQIRRQPGGQTSQDS 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 Q + V GS +T LD A+ G +F + P G + TRDG F Sbjct: 61 ELPSGLQLGTGVRVVGTQKIFTAGSLQTTEQPLDLAVNGRGFFQILQPDGTVSYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASV-PIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 + DG +V++ G + ++ E V + + +VI + L Sbjct: 121 HLNSDGQIVTSQGFALEPAIVLPAEVRTFTVGEDGTVSVTTAGNAQAQVIGNIQLADFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G N+ + + T + LE+SN + + E+ MI + + Sbjct: 181 PAGLEAIGNNLFLETGSSGAPQVGNPGLNGLGTTLQNTLENSNVSVVEELVNMITTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + +I ++ + +N+ Sbjct: 241 EMNSKVISTADQMLSFVTQNL 261 >gi|311105937|ref|YP_003978790.1| flagellar basal-body rod protein FlgG [Achromobacter xylosoxidans A8] gi|310760626|gb|ADP16075.1| flagellar basal-body rod protein FlgG [Achromobacter xylosoxidans A8] Length = 261 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 40/260 (15%), Positives = 90/260 (34%), Gaps = 21/260 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I + + +++N++N T GF+ + F +++ Sbjct: 1 MMRSLWIAKTGLEGQQTSMDVISNNLANVSTNGFKRGRAVFQDLMYQTLRQPGAQVGDAT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + G+ +TG+E+D A+ G + +E P G TRDG Sbjct: 61 QLPSGLQLGTGARVAATERIHTAGNLNNTGSEMDIAINGRGFLQIELPDGTQAYTRDGAL 120 Query: 107 KVTDDGSLVSASGK--YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 + +G L + SG P +++ + I ++ + + I + + + Sbjct: 121 QRDQNGQLTTVSGYVIQPPMNIPDNALSISIGNDGIVSVTQPGAAGINVQIGQLQIATFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + P ++ + ++E SN N E+ MI + Sbjct: 181 NPTGLQSIGENLYLETDASGPANLLQPGVDGAGSIMQKYVETSNVNVAEELVNMITTQRA 240 Query: 220 FNSITTLIDENEKSMLEAIR 239 + + + +++ + + Sbjct: 241 YEMNSKAVKTSDEMLARLTQ 260 >gi|310659662|ref|YP_003937383.1| flagellar component of cell-distal portion of basal-body rod [Clostridium sticklandii DSM 519] gi|308826440|emb|CBH22478.1| flagellar component of cell-distal portion of basal-body rod [Clostridium sticklandii] Length = 266 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 53/265 (20%), Positives = 105/265 (39%), Gaps = 26/265 (9%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + + A + + T+++N++N +T GF+ K +F +++ + Sbjct: 1 MRALWTAASGMRAQQLNMDTISNNLANVNTTGFKKQKTEFKDLLYTSMKSVSNDPELGEP 60 Query: 54 ---QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---RGIILTRDGRFK 107 Q V G+ T D ALEG +F +E+P + TRDG FK Sbjct: 61 VNLQIGHGVRPVATSRLFTNGNLEKTENPTDVALEGPGFFVVENPTGNPEQLFTRDGNFK 120 Query: 108 VTDDGSLVS--ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK-----VIATMGL 160 + DG +++ S Y VL I++ F++ E G ++ + + + + + Sbjct: 121 FSVDGDVMTLVTSQGYTVLSTDDDVIEVESTMRNFSISEGGMVTAQDEAGEIVELGEIQI 180 Query: 161 YSVDMSQGFVRRENSGISPNI----PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 +G N+ S P ++ + +GFLE SN + EM +MI Sbjct: 181 VQFINPEGLQAMGNNFFSLTANSGEPVIEEDESKDTKLYQGFLETSNVQLVDEMVRMIMA 240 Query: 217 TQKFNSITTLIDENEKSMLEAIRNI 241 + + + I + M + + ++ Sbjct: 241 QRAYEINSKSIQTADDMM-QTVNSL 264 >gi|57237001|ref|YP_178802.1| flagellar basal body rod protein FlgG [Campylobacter jejuni RM1221] gi|86149818|ref|ZP_01068047.1| flagellar basal-body rod protein FlgG [Campylobacter jejuni subsp. jejuni CF93-6] gi|86153387|ref|ZP_01071591.1| flagellar basal-body rod protein FlgG [Campylobacter jejuni subsp. jejuni HB93-13] gi|88597119|ref|ZP_01100355.1| flagellar basal-body rod protein FlgG [Campylobacter jejuni subsp. jejuni 84-25] gi|121613571|ref|YP_001000394.1| flagellar basal body rod protein FlgG [Campylobacter jejuni subsp. jejuni 81-176] gi|148926663|ref|ZP_01810344.1| flagellar basal-body rod protein [Campylobacter jejuni subsp. jejuni CG8486] gi|157414985|ref|YP_001482241.1| flagellar basal body rod protein FlgG [Campylobacter jejuni subsp. jejuni 81116] gi|167005337|ref|ZP_02271095.1| flagellar basal-body rod protein [Campylobacter jejuni subsp. jejuni 81-176] gi|205355540|ref|ZP_03222311.1| flagellar basaL body rod protein [Campylobacter jejuni subsp. jejuni CG8421] gi|218562337|ref|YP_002344116.1| flagellar basal body rod protein FlgG [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|283956107|ref|ZP_06373594.1| flagellar basal-body rod protein [Campylobacter jejuni subsp. jejuni 1336] gi|57165805|gb|AAW34584.1| flagellar basal-body rod protein FlgG [Campylobacter jejuni RM1221] gi|85839636|gb|EAQ56896.1| flagellar basal-body rod protein FlgG [Campylobacter jejuni subsp. jejuni CF93-6] gi|85843113|gb|EAQ60324.1| flagellar basal-body rod protein FlgG [Campylobacter jejuni subsp. jejuni HB93-13] gi|87249438|gb|EAQ72398.1| flagellar basal-body rod protein FlgG [Campylobacter jejuni subsp. jejuni 81-176] gi|88190808|gb|EAQ94781.1| flagellar basal-body rod protein FlgG [Campylobacter jejuni subsp. jejuni 84-25] gi|112360043|emb|CAL34835.1| flagellar basal-body rod protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|145845182|gb|EDK22277.1| flagellar basal-body rod protein [Campylobacter jejuni subsp. jejuni CG8486] gi|157385949|gb|ABV52264.1| flagellar basal-body rod protein [Campylobacter jejuni subsp. jejuni 81116] gi|205346774|gb|EDZ33406.1| flagellar basaL body rod protein [Campylobacter jejuni subsp. jejuni CG8421] gi|283792427|gb|EFC31209.1| flagellar basal-body rod protein [Campylobacter jejuni subsp. jejuni 1336] gi|284925954|gb|ADC28306.1| flagellar basal-body rod protein FlgG [Campylobacter jejuni subsp. jejuni IA3902] gi|307747622|gb|ADN90892.1| Flagellar basal-body rod protein FlgG [Campylobacter jejuni subsp. jejuni M1] gi|315058161|gb|ADT72490.1| Flagellar basal-body rod protein flgG [Campylobacter jejuni subsp. jejuni S3] gi|315926812|gb|EFV06186.1| flagellar basal-body rod protein FlgG [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315931897|gb|EFV10852.1| flagellar basal-body rod protein FlgG [Campylobacter jejuni subsp. jejuni 327] Length = 263 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 40/262 (15%), Positives = 96/262 (36%), Gaps = 22/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S + +A + ++ ++N++N +T GF+ + +F++++ + Sbjct: 1 MMRSLHTAATGMVAQQTQIDVTSNNIANVNTAGFKKSRAEFADLMYQVMKYAGTSTSATT 60 Query: 56 ---------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGR 105 + + + E ++ LD A+ G+ +F ++ P G I TR+G+ Sbjct: 61 LSPSGIEVGVGVRPTAVTKVFTEGNLKSTSTDGLDMAIAGNGFFQIQLPDGTIGYTRNGQ 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVD 164 F ++G++V++ G + +M Q+ I + L Sbjct: 121 FTKDNEGNIVNSDGYRLLPEMTIPEGATAINVATDGTVSVMLPGEQQETQIGQVELVQFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G ++ T++ GF+E SN + EM +I + Sbjct: 181 NPAGLHSMGDNLYLETGASGAPVAGIAGQDGLGTIRHGFIELSNVQLVEEMTDLITGQRA 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + + I ++ + + + Sbjct: 241 YEAGSKAITTSDDMLG-IVNQL 261 >gi|260222470|emb|CBA32066.1| Flagellar basal-body rod protein flgG [Curvibacter putative symbiont of Hydra magnipapillata] Length = 260 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 47/257 (18%), Positives = 95/257 (36%), Gaps = 20/257 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + +L +++N++N T GF+ F +++ + Sbjct: 1 MINSLWISKTGMEAQQMQLDVISNNLANVSTNGFKKSHAVFEDLMYQNLRQVGSNTSEQS 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 Q V + S G+ + LD A++G+ +F + P G TRDG F Sbjct: 61 TLPTGLQLGLGVRTVATSRSFSQGNLQQSSNNLDVAIQGNGFFQVTMPDGTTGYTRDGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQKGKVIATMGLYSVDM 165 ++ + G LV+++G + + + + I T+ L S Sbjct: 121 QIDNAGRLVTSNGLPILNGINIPANATSVAIAQDGAVTAMVPGNVAPQPIGTITLASFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + T+ +GF+E SN N + E+ MI + + Sbjct: 181 PAGLEPKGQNIYAESTASGQPNAGTAGANGLGTLAQGFVETSNVNVVQELVTMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEA 237 + I +++ + + Sbjct: 241 EMNSKAIQTSDQMLQKL 257 >gi|85712256|ref|ZP_01043307.1| Flagella basal body rod protein [Idiomarina baltica OS145] gi|85693883|gb|EAQ31830.1| Flagella basal body rod protein [Idiomarina baltica OS145] Length = 262 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 47/262 (17%), Positives = 96/262 (36%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + I A ++ +S +++N++N TVGF+ + F +++ N + Sbjct: 1 MNPALWISKTGLDAQQRDISVISNNLANASTVGFKKSRAIFEDLLYQNINQPGGQSAQDV 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 + S G+ +T LD + G +F + P G + TR+G+F Sbjct: 61 ELPNGLMLGAGTKVVATQKSHTQGNVQTTDNSLDVMINGKGFFQVLMPDGTLSYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEIS--QKGKVIATMGLYSVD 164 V ++G+LV++ YP+ +P + VI + L S Sbjct: 121 SVNEEGTLVTSGNGYPIEPQIQIPEDAISLSISQEGEVTVRQPGNAQNAVIGQLNLASFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + ++ V++G LE SN N E+ +I + Sbjct: 181 NPAGLEPIGQNLYKETAVSGAPQESVPGVDGVGNVRQGMLETSNVNVTEELVNLIEAQRG 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I ++ + + + Sbjct: 241 YEMNSKVISSVDQMLSYINQQL 262 >gi|57505521|ref|ZP_00371448.1| flagellar basal-body rod protein (flgG) [Campylobacter upsaliensis RM3195] gi|57016068|gb|EAL52855.1| flagellar basal-body rod protein (flgG) [Campylobacter upsaliensis RM3195] Length = 263 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 40/262 (15%), Positives = 93/262 (35%), Gaps = 22/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS--- 57 M S + +A + ++ ++N+SN +TVGF+ + +F++++ S Sbjct: 1 MMRSLHTAATGMVAQQTQIDVTSNNISNVNTVGFKKSRAEFADLMYQTMKYAGTSTSATT 60 Query: 58 -----------FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGR 105 + + ++ D A+EG+ +F ++ P TR+G+ Sbjct: 61 LSPSGIEVGLGVRPTAVTKIFTPGSYKSTSTDSFDMAIEGNGFFQIQLPDGTTAYTRNGQ 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVD 164 F ++G++V+A G + +M Q+ I + L Sbjct: 121 FTRDNEGNVVNADGYRLIPEMTVPEGATNISIAKDGTVSVMLAGEQEETQIGQIELVQFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G ++ ++ GF+E SN + EM +I + Sbjct: 181 NPAGLHSMGDNLYLETGASGAPVAGIAGQDGLGNIRHGFVELSNVQLVEEMTDLITGQRA 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + + I +++ + + + Sbjct: 241 YEAGSKAITTSDEMLG-IVNQL 261 >gi|157373205|ref|YP_001471805.1| flagellar basal-body rod protein FlgG [Shewanella sediminis HAW-EB3] gi|157315579|gb|ABV34677.1| flagellar basal-body rod protein FlgG [Shewanella sediminis HAW-EB3] Length = 261 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 44/261 (16%), Positives = 104/261 (39%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 MQ++ + A + +++T+A+N++N +T GF+ +V F+++ + Sbjct: 1 MQSALWVSKTGLTAQDVKMTTIANNLANVNTTGFKRDRVAFNDLFYQTQRQPGGQVDELN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106 Q + G ++T +LD A+EG +F +E + +RDG+F Sbjct: 61 ELPSGLQLGTGTRVVGTQKIFTSGDMLTTNQQLDLAIEGQGFFQIEEANGDLAYSRDGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 DG +V++ G V ++ + V + + + + + L + Sbjct: 121 YRNSDGLMVTSQGLPLVPNIEIPEDALTITIATDGIVTAQISGQAEAQELGQITLVNFTN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G R ++ + + +++G LE +N N + EM +MI + + Sbjct: 181 PTGLEARGDNLYRETGASGAAIEGVAGDQAIGQLRQGALEGANVNVVEEMVEMISTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 ++ ++ + +++ Sbjct: 241 EMNAKVVSASDDMLKFLNQSL 261 >gi|323492336|ref|ZP_08097489.1| flagellar basal body rod protein FlgG [Vibrio brasiliensis LMG 20546] gi|323313383|gb|EGA66494.1| flagellar basal body rod protein FlgG [Vibrio brasiliensis LMG 20546] Length = 261 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 44/261 (16%), Positives = 98/261 (37%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M ++ + A + +++ +++N++N +TVGF+ +V F ++ +I+ Sbjct: 1 MHSALWVSKTGMAAQDTKMTAISNNLANVNTVGFKRDRVVFEDLFYSIQRQPGAQVDQVN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106 Q S V G+ +T + D A+ G +F +E+ I+ TR+G+F Sbjct: 61 ELPSGVQLGSGVRVVGTQKVFTQGNTQNTSQQYDLAVMGQGFFQIENSDGQIMYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 V +G +V++ G + + + V S + + + L Sbjct: 121 HVNSEGLMVNSQGLPLEPQIQIPDNALSLSVGVDGTVTATTVDSSTPEQLGQITLAKFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + ++ +K+G LE SN + EM MI + + Sbjct: 181 PAGLEAVGGNLFRETEASGQADELTAGEDGVGIIKQGALEGSNVQVVEEMVDMITTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 ++ + + +++ Sbjct: 241 EMNAKVVSAADDMLKFVAQSV 261 >gi|89902479|ref|YP_524950.1| flagellar basal-body rod FlgG [Rhodoferax ferrireducens T118] gi|89347216|gb|ABD71419.1| Flagellar basal-body rod FlgG [Rhodoferax ferrireducens T118] Length = 260 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 48/257 (18%), Positives = 96/257 (37%), Gaps = 20/257 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + +L +++N++N T GF+ F +++ Sbjct: 1 MINSLWISKTGMEAQQMQLDVISNNLANVSTNGFKRASAVFEDLMYQNLRQAGSNSSEQS 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 Q V + S G+ +G +LD A++G+ +F + P G TRDG F Sbjct: 61 QLPTGLQVGLGVRTVATSRSFAQGNLQQSGNKLDVAIQGNGFFQVTMPDGTTNYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDE-IFNVGEKGEISQKGKVIATMGLYSVDM 165 +V+ G LV+A+G + V + + + I ++ L S Sbjct: 121 QVSSTGQLVTATGLPIANGVTVPANATSIAIAGDGTVTAQVPGTPTPQGIGSISLASFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + + +G++E SN N + E+ MI + + Sbjct: 181 PAGLDPKGQNLYAESTASGQPNSGTPGADGMGALMQGYVETSNVNVVQELVTMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEA 237 + I +++ + + Sbjct: 241 EMNSKAIQTSDQMLQKL 257 >gi|289679021|ref|ZP_06499911.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv. syringae FF5] gi|330972416|gb|EGH72482.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv. aceris str. M302273PT] Length = 262 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 44/262 (16%), Positives = 97/262 (37%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + L+T+++N++N T GF++ + +F +++ IK Sbjct: 1 MLPALYVAKTGLAAQDTNLTTISNNLANVSTTGFKSDRAEFQDLLYQIKRQPGAQSTQDS 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V + GS +T LD A+ G +F + P I +RDG F Sbjct: 61 ELPSGLQLGTGVRIVGTQKNFTAGSLQTTNNPLDLAVNGRGFFQVTQPDGTIAYSRDGTF 120 Query: 107 KVTDDGSLVSASGK--YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 + +G +V+A+G P + + + + ++I + Sbjct: 121 HLDANGQIVTANGYALEPAIVVPQNAQTFTVGQDGTVSVTLAGATATPQIIGNIQTADFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQK 219 G + + + + LE+SN +++ E+ MI + Sbjct: 181 NPAGLQAMGGNLYLETGSSGAPQIGTPGLNGLGPTLQNTLENSNVSTVEELVNMITTQRA 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I ++ + +N+ Sbjct: 241 YEMNSKVISTADQMLQNLTQNL 262 >gi|312111671|ref|YP_003989987.1| fagellar hook-basal body protein [Geobacillus sp. Y4.1MC1] gi|311216772|gb|ADP75376.1| fagellar hook-basal body protein [Geobacillus sp. Y4.1MC1] Length = 268 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 53/265 (20%), Positives = 96/265 (36%), Gaps = 26/265 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++A + +L + +N++N +T GF+ + F ++V Sbjct: 1 MLRSMYSGISAMKNFQVKLDVIGNNIANVNTYGFKKGRTIFKDLVSQQIAGASGPTANRG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI--ILTRDGRF 106 Q + GS TG LD A+ GD +F LE G + TR G F Sbjct: 61 GVNPKQVGLGMQLAAIDTVHTQGSTQPTGRPLDLAISGDGFFVLEDANGTNRLYTRAGNF 120 Query: 107 KVTD----DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162 + + +VSA G+Y + + I + + + T G Sbjct: 121 YLDAGDGTNRYIVSADGRYLLGTSGRIRIPVTAQSVSIGTDGTVSYVDANGQLQTAGKIR 180 Query: 163 ---VDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMI 214 ++G + ++ P + T+ G LE SN + E +MI Sbjct: 181 LAKFSNNEGLEKVGDNLFRPTANSGDPQIGDVGDNGTGTIVSGALEMSNVDLAEEFTEMI 240 Query: 215 HLTQKFNSITTLIDENEKSMLEAIR 239 + F + T +I +++ + E + Sbjct: 241 VAQRGFQANTRIITTSDEILQELVN 265 >gi|307721135|ref|YP_003892275.1| flagellar basal-body rod protein FlgG [Sulfurimonas autotrophica DSM 16294] gi|306979228|gb|ADN09263.1| flagellar basal-body rod protein FlgG [Sulfurimonas autotrophica DSM 16294] Length = 262 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 41/259 (15%), Positives = 94/259 (36%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S L ++ ++ T A+N++N +T+GF+ + +F++++ + Sbjct: 1 MMQSLYTASTGMLGMQTQIDTTANNIANVNTIGFKKSRAEFADLMYHVMEYAGTSTSDTT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 V GS T LD A+ G +F +E P + +++G F Sbjct: 61 KSPTGIEVGLGVRPTAINKIFSEGSLKQTDNNLDLAITGKGFFKMELPDGTEVYSKNGAF 120 Query: 107 KVTDDGSLVSASGKY-PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 K+ DG++V++ G + V + I + + Sbjct: 121 KIDQDGTVVNSDGYTLIPQIVIPPDATNINIGTDGTVTVIQPGQTQATQIGQIQTTNFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ + T+++GF+E SN + E+ +I + + Sbjct: 181 PAGLHAMGDNLYIETDSSGQPVEGIPGVDGLGTIRQGFVELSNVELVVELTDLITGQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 ++ + +I +++ + Sbjct: 241 DANSKIITTSDEMLQTTNN 259 >gi|315637964|ref|ZP_07893150.1| flagellar basal-body rod protein FlgG [Campylobacter upsaliensis JV21] gi|315481999|gb|EFU72617.1| flagellar basal-body rod protein FlgG [Campylobacter upsaliensis JV21] Length = 263 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 40/262 (15%), Positives = 93/262 (35%), Gaps = 22/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS--- 57 M S + +A + ++ ++N+SN +TVGF+ + +F++++ S Sbjct: 1 MMRSLHTAATGMVAQQTQIDVTSNNISNVNTVGFKKSRAEFADLMYQTMKYAGTSTSATT 60 Query: 58 -----------FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGR 105 + + ++ D A+EG+ +F ++ P TR+G+ Sbjct: 61 LSPSGIEVGLGVRPTAVTKVFTPGSYKSTSTDSFDMAIEGNGFFQIQLPDGTTAYTRNGQ 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVD 164 F ++G++V+A G + +M Q+ I + L Sbjct: 121 FTRDNEGNVVNADGYRLIPEMTVPEGATNISIAKDGTVSVMLAGEQEETQIGQIELVQFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G ++ ++ GF+E SN + EM +I + Sbjct: 181 NPAGLHSMGDNLYLETGASGAPVAGIAGQDGLGNIRHGFVELSNVQLVEEMTDLITGQRA 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + + I +++ + + + Sbjct: 241 YEAGSKAITTSDEMLG-IVNQL 261 >gi|241589578|ref|YP_002979603.1| flagellar basal-body rod protein FlgG [Ralstonia pickettii 12D] gi|240868290|gb|ACS65949.1| flagellar basal-body rod protein FlgG [Ralstonia pickettii 12D] Length = 261 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 89/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + +L V++N++N +T GF+ + F +++ + Sbjct: 1 MIRSLWISKTGMEAQQTQLDVVSNNLANVNTTGFKRSRAVFEDLLYQNAREPGAQSSQQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + G+ TG D A+ G+ +F ++ P G TRDG F Sbjct: 61 ALPSGMQIGTGTRIVATSRLHSQGNLSKTGNATDVAINGNGFFQVQRPDGTLAYTRDGNF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-IATMGLYSVDM 165 +++ G LV++SG M V + + L + Sbjct: 121 QISAQGQLVTSSGYLVQPAMMVPRNATSLMIGKDGVVTVTTPGMVNRTQVGAFQLANFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + ++E SN N + EM Q+I + + Sbjct: 181 PAGLRSLGENLYAETEASGGANLAVPGGNGLGMLHQNYVETSNVNVVEEMIQLIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + ++ + + + Sbjct: 241 EINSKAVQTADRMLEKIAQ 259 >gi|146294548|ref|YP_001184972.1| flagellar basal-body rod protein FlgG [Shewanella putrefaciens CN-32] gi|145566238|gb|ABP77173.1| flagellar basal-body rod protein FlgG [Shewanella putrefaciens CN-32] Length = 261 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 105/261 (40%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 MQ++ + A + +++ +A+N++N +T GF+ +V F+++ ++ Sbjct: 1 MQSALWVSKTGLTAQDTKMTAIANNLANVNTTGFKRDRVAFNDLFYQVQRQPGGQVDALN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + G +T +LD A++G +F +E P + TRDG+F Sbjct: 61 NLPSGLQLGAGTRVVGTQKIFTTGDMQNTSQQLDLAIQGHGFFQVEEPNGDLAYTRDGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 + +G +V++ G V ++ + V + + + + + L + Sbjct: 121 YRSSEGMMVTSQGLPLVPNIVIPEDALTVTIASDGVVTAQMAGEAEPQDLGQITLVNFTN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G R ++ + + +++G LE +N N + EM +MI + + Sbjct: 181 PSGLEARGDNLYRETAASGVAVEGVAGDQALGALRQGALEGANVNVVEEMVEMISTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 ++ ++ + +++ Sbjct: 241 EMNAKVVSASDDMLKFLNQSV 261 >gi|188579923|ref|YP_001923368.1| flagellar basal body rod protein [Methylobacterium populi BJ001] gi|179343421|gb|ACB78833.1| flagellar basal body rod protein [Methylobacterium populi BJ001] Length = 242 Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats. Identities = 74/243 (30%), Positives = 136/243 (55%), Gaps = 5/243 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 MQ+S + L++Q+ALE+RL+T A+N++N T GFR +V FSE++ +++FV Sbjct: 1 MQSSLYVALSSQIALEKRLTTTANNVANMATAGFRAEEVSFSELLARSNRG---EVAFVG 57 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 GK LS+ G T + LD A++GDAW ++ P+ + TRDGR + +G L + G Sbjct: 58 PGKNTLSRAAGPTTKTDSALDVAVQGDAWLGVKGPKGDTLYTRDGRLTMDANGQLRTV-G 116 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 PV+D P+ + + +G G I Q + +G++S+D R + ++ Sbjct: 117 GMPVVDPGGGPLLLDPQAGPPTIGRDGSIHQGVNQVGALGVFSLDPKATLSRSGENAVAA 176 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 ++P P++D + + V +G++E +N N + EM ++I + + F S T+ E + ++ A++ Sbjct: 177 SLPGRPVQDFTRIGVVQGYVEGANVNPILEMTRLIAIQRAFESAATMTSEADNTLTGAVK 236 Query: 240 NIA 242 + Sbjct: 237 TLG 239 >gi|120597307|ref|YP_961881.1| flagellar basal-body rod protein FlgG [Shewanella sp. W3-18-1] gi|120557400|gb|ABM23327.1| flagellar basal-body rod protein FlgG [Shewanella sp. W3-18-1] Length = 261 Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 105/261 (40%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 MQ++ + A + +++ +A+N++N +T GF+ +V F+++ ++ Sbjct: 1 MQSALWVSKTGLTAQDTKMTAIANNLANVNTTGFKRDRVAFNDLFYQVQRQPGGQVDALN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + G +T +LD A++G +F +E P + TRDG+F Sbjct: 61 NLPSGLQLGAGTRVVGTQKIFTTGDMQNTSQQLDLAIQGHGFFQVEEPNGDLAYTRDGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 + +G +V++ G V ++ + V + + + + + L + Sbjct: 121 YRSSEGMMVTSQGLPLVPNIVIPEDALTVTIASDGVVTAQMAGEAEPQDLGQITLVNFTN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G R ++ + + +++G LE +N N + EM +MI + + Sbjct: 181 PAGLEARGDNLYRETAASGVAVEGVAGDQALGALRQGALEGANVNVVEEMVEMISTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 ++ ++ + +++ Sbjct: 241 EMNAKVVSASDDMLKFLNQSV 261 >gi|77457729|ref|YP_347234.1| flagellar basal body rod protein FlgG [Pseudomonas fluorescens Pf0-1] gi|77381732|gb|ABA73245.1| flagellar basal-body rod protein [Pseudomonas fluorescens Pf0-1] Length = 261 Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats. Identities = 51/261 (19%), Positives = 96/261 (36%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + L+T+++N++N T GF+ + +F +++ IK Sbjct: 1 MLPALWVAKTGLSAQDTNLTTISNNLANVSTTGFKRDRAEFQDLLYQIKRQPGAQSTQDS 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 Q + V + GS +T LD A++G +F + P G TRDG F Sbjct: 61 ELPSGLQVGTGVRIVGTQKNFTAGSLQTTEQPLDMAIDGRGFFQILQPDGTTSYTRDGTF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 + +G +V+ASG + Q V + +VI + Sbjct: 121 HLDSNGQIVNASGFALEPAIVIPNNAQTFTVGRDGTVSITVAGNPAAQVIGNLQTADFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G N+ + T + LE SN +++ EM MI + + Sbjct: 181 PAGLQAVGNNLFLETAASGAPQVGTPGLNGFGTTLQNTLETSNVSTVEEMVNMITTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + +I ++ + +N+ Sbjct: 241 EMNSKVISTADQMLSFVTQNL 261 >gi|315127351|ref|YP_004069354.1| flagellar basal body rod protein FlgG [Pseudoalteromonas sp. SM9913] gi|315015865|gb|ADT69203.1| flagellar basal body rod protein FlgG [Pseudoalteromonas sp. SM9913] Length = 262 Score = 166 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 43/262 (16%), Positives = 96/262 (36%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + I A + +S +++N++N TVG++ + F +++ N + Sbjct: 1 MNPALWISKTGLDAQQTDISVISNNLANASTVGYKKSRAIFEDLLYQNINQPGGRSSQDT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + + G+ ++T LD+ + G +F + P I +R+G+F Sbjct: 61 EMPSGLMLGAGTKVVANQKNFSQGNMLTTENSLDWMISGPGFFEVLQPDGNIAYSRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFN--VGEKGEISQKGKVIATMGLYSVD 164 +G +V++ Y V +VP + V + + + VI + + Sbjct: 121 TTDGEGRVVTSGAGYVVQPEMNVPDDAQSITVSQDGEVSVRIKGQAENVVIGQITISDFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + + + T+ +G LE SN N E+ +I + Sbjct: 181 NPSGLEPIGQNLYTETAVSGAPVQGNPGVEGLGTIIQGSLETSNVNVTEELVNLIETQRV 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I ++ M + + Sbjct: 241 YEMNSKVISAVDEMMSYINQQL 262 >gi|24112486|ref|NP_706996.1| flagellar basal body rod protein FlgG [Shigella flexneri 2a str. 301] gi|30062614|ref|NP_836785.1| flagellar basal body rod protein FlgG [Shigella flexneri 2a str. 2457T] gi|24051372|gb|AAN42703.1| flagellar basal body rod protein flgG [Shigella flexneri 2a str. 301] gi|30040860|gb|AAP16591.1| flagellar basal body rod protein flgG [Shigella flexneri 2a str. 2457T] gi|281600496|gb|ADA73480.1| Flagellar basal body rod protein flgG [Shigella flexneri 2002017] gi|313650470|gb|EFS14877.1| flagellar basal-body rod protein FlgG [Shigella flexneri 2a str. 2457T] gi|332758238|gb|EGJ88561.1| flagellar basal-body rod protein FlgG [Shigella flexneri 4343-70] gi|332759659|gb|EGJ89964.1| flagellar basal-body rod protein FlgG [Shigella flexneri 2747-71] gi|332761424|gb|EGJ91708.1| flagellar basal-body rod protein FlgG [Shigella flexneri K-671] gi|332767686|gb|EGJ97879.1| flagellar basal-body rod protein FlgG [Shigella flexneri 2930-71] gi|333005399|gb|EGK24917.1| flagellar basal-body rod protein FlgG [Shigella flexneri K-218] gi|333019426|gb|EGK38709.1| flagellar basal-body rod protein FlgG [Shigella flexneri K-304] Length = 260 Score = 166 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 41/259 (15%), Positives = 87/259 (33%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M +S I A + + +A+N++N T GF+ + F +++ Sbjct: 1 MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+ T D A++G +F + P RDG F Sbjct: 61 TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGSSAYIRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V +G LV+A G + + V + + + L + Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + + +G++E SN N E+ MI + + + Sbjct: 181 DTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + ++ + + + Sbjct: 241 EINSKAVSTTDQMLQKLTQ 259 >gi|225548842|ref|ZP_03769819.1| flagellar hook-basal body complex protein [Borrelia burgdorferi 94a] gi|225370445|gb|EEG99881.1| flagellar hook-basal body complex protein [Borrelia burgdorferi 94a] Length = 282 Score = 166 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 105/280 (37%), Gaps = 38/280 (13%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51 M + +A ++L TV++N++N D +G++ F E++ ND Sbjct: 1 MVRGIYTAASGMMAERRKLDTVSNNLANIDLIGYKKDLSIQKAFPEMLIRRLNDDGLYKF 60 Query: 52 ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101 + + + V + Y E G +TG LD AL +F +++ G T Sbjct: 61 PKGHLETAPVVGKIGTGVEENEIYTVFEQGPLKTTGNPLDLALTDQGFFVIQTSDGERYT 120 Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI------------- 148 R+G F + +G LV+ SG + + + ++ Sbjct: 121 RNGSFTIGKEGILVTKSGFPVLGEKGYIYLKKNNFKITPQGQIFHNSNFESDPKRLVSEY 180 Query: 149 ---SQKGKVIATMGLYSVDMSQGFVRRENSGIS---PNIPPTPLEDLSGVTVKRGFLEDS 202 + +++ T+ + + + + ++ NS + ++ ++ LE S Sbjct: 181 ENSWENYELLDTIRIVNFENPRFLKKQGNSLWIDTKTSGKAQEIDISLRPKIETETLEAS 240 Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 N N++ EM MI + + + + I + + + I I Sbjct: 241 NVNTVKEMVLMIEINRAYEANQKTIQTEDSLLGKLINEIG 280 >gi|90415316|ref|ZP_01223250.1| flagellar basal-body rod protein FlgG (distal rod protein) [marine gamma proteobacterium HTCC2207] gi|90332639|gb|EAS47809.1| flagellar basal-body rod protein FlgG (distal rod protein) [marine gamma proteobacterium HTCC2207] Length = 261 Score = 166 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 51/261 (19%), Positives = 96/261 (36%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S I A + R+S +++N++N +T GF+ + F +++ + Sbjct: 1 MDASLWIAKTGLTAQQTRMSVISNNLANVNTTGFKKDRAVFEDLLYQNIVPAGGQVDAES 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + G+ I+T LD A+ GD +F+++ I +RDG F Sbjct: 61 ETPTGLMLGTGTRVVATEKLHAQGNIITTENALDLAISGDGYFSVQQADGTIAYSRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG-KVIATMGLYSVDM 165 K++ +G+LV+A G+ + + V + G I + L Sbjct: 121 KLSAEGNLVTAGGQTLLPAITVPQNAASLTIGRDGVVTVELSNGGGSSQIGQLQLSRFVN 180 Query: 166 SQGFVRRENSGI-SPNIPPTP----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 + G + + N P + +G LE SN N + EM MI + + Sbjct: 181 NSGLQPIGRNLMQQTNASGDPLVVLPGADGAGMLMQGALEASNVNVVEEMVNMIETQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + I + + N+ Sbjct: 241 EVNSKAISAADGMLRFLNNNL 261 >gi|223889387|ref|ZP_03623973.1| flagellar hook-basal body complex protein [Borrelia burgdorferi 64b] gi|223885073|gb|EEF56177.1| flagellar hook-basal body complex protein [Borrelia burgdorferi 64b] Length = 282 Score = 166 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 105/280 (37%), Gaps = 38/280 (13%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51 M + +A ++L TV++N++N D +G++ F E++ ND Sbjct: 1 MVRGIYTAASGMMAERRKLDTVSNNLANIDLIGYKKDLSIQKAFPEMLIRRLNDDGLYKF 60 Query: 52 ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101 + + + V + Y E G +TG LD AL +F +++ G T Sbjct: 61 PKGHLETAPVVGKIGTGVEENEIYTVFEQGPLKTTGNPLDLALTDQGFFVIQTSDGERYT 120 Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI------------- 148 R+G F + +G LV+ SG + + + ++ Sbjct: 121 RNGSFTIGKEGILVTKSGFPVLGEKGYIYLKKNNFKITHQGQVFHNSNFESDPKRLVSEY 180 Query: 149 ---SQKGKVIATMGLYSVDMSQGFVRRENSGIS---PNIPPTPLEDLSGVTVKRGFLEDS 202 + +++ T+ + + + + ++ NS + ++ ++ LE S Sbjct: 181 ENSWENYELLDTIRIVNFENPRFLKKQGNSLWIDTKTSGKAQEIDISLRPKIEIETLEAS 240 Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 N N++ EM MI + + + + I + + + I I Sbjct: 241 NVNAVKEMVLMIEINRAYEANQKTIQTEDSLLGKLINEIG 280 >gi|116250482|ref|YP_766320.1| flagellar basal body rod protein FlgG [Rhizobium leguminosarum bv. viciae 3841] gi|115255130|emb|CAK06204.1| flgG [Rhizobium leguminosarum bv. viciae 3841] Length = 262 Score = 166 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 92/261 (35%), Gaps = 21/261 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----------- 50 + I A + L +A+N++N +T GF+ + +FS+++ + Sbjct: 1 MRALAIAATGMDAQQTNLEVIANNIANINTTGFKRARAEFSDLLYQTERAKGVANRANQA 60 Query: 51 ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRF 106 + V + G TG +LD AL G +F ++ + + +R G F Sbjct: 61 VVPEGANIGLGVQTSAVRNLHLQGELTQTGNDLDVALIGKGFFQIQSTDGTTLYSRAGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 D G LV+ G + + V K + + + + L Sbjct: 121 NKNDQGQLVTIDGYEVLPGITIPTGSTELTISRSGQVSAKLPGATEATELGQLTLADFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ + +K+G+LE SN + + E+ ++I + + Sbjct: 181 EAGLQPLGDNLFQETPASGEAVIGNPDEEGFAYMKQGYLESSNVDPVKEITELISAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + +I ++ +N+ Sbjct: 241 EMNSKVITTADEMASIVSKNL 261 >gi|189426330|ref|YP_001953507.1| flagellar basal body rod protein FlgG [Geobacter lovleyi SZ] gi|189422589|gb|ACD96987.1| flagellar basal-body rod protein FlgG [Geobacter lovleyi SZ] Length = 262 Score = 166 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 92/261 (35%), Gaps = 21/261 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S + Q ++ +A+N++N +T GF+ + F +++ + Sbjct: 1 MMRSLWTAASGMNTQTQNINVIANNLANVNTTGFKKSRADFQDLMYQTVQNPGSPSTNAA 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q G F +TG +LD A+EGD +F ++ P +R G F Sbjct: 61 QIPVGIQFGMGSKLAAVSKQFTPGDFSNTGGQLDMAIEGDGFFQIQMPDGSTAYSRAGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 K+ +G +V+ G + ++ V + + + + Sbjct: 121 KMDSNGRVVTPEGYPMLPEIVIPNNSTKITIGTDGTVSAVQSGQSTASTVGNIQIANFTN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + T+ +GFLE SN + EM MI + + Sbjct: 181 PAGLSSMGKNFYQQTDASGNATTGTPGQTGLGTITQGFLEMSNVDVATEMVNMIIGQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + + I +++ + + N+ Sbjct: 241 EANSKAITTSDEML-QLANNL 260 >gi|86151551|ref|ZP_01069765.1| flagellar basal-body rod protein FlgG [Campylobacter jejuni subsp. jejuni 260.94] gi|85841180|gb|EAQ58428.1| flagellar basal-body rod protein FlgG [Campylobacter jejuni subsp. jejuni 260.94] Length = 263 Score = 166 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 40/262 (15%), Positives = 95/262 (36%), Gaps = 22/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S + +A + ++ ++N++N +T GF+ + +F++++ + Sbjct: 1 MMRSLHTAATGMVAQQTQIDVTSNNIANVNTAGFKKSRAEFADLMYQVMKYAGTSTSATT 60 Query: 56 ---------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGR 105 + + + E + LD A+ G+ +F ++ P G I TR+G+ Sbjct: 61 LSPSGIEVGVGVRPTAVTKVFTEGNLKSTNTDGLDMAIAGNGFFQIQLPDGTIGYTRNGQ 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVD 164 F ++G++V++ G + +M Q+ I + L Sbjct: 121 FTKDNEGNIVNSDGYRLLPEMTIPEGATAINVATDGTVSVMLPGEQQETQIGQVELVQFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G ++ T++ GF+E SN + EM +I + Sbjct: 181 NPAGLHSMGDNLYLETGASGAPVAGIAGQDGLGTIRHGFIELSNVQLVEEMTDLITGQRA 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + + I ++ + + + Sbjct: 241 YEAGSKAITTSDDMLG-IVNQL 261 >gi|330818583|ref|YP_004362288.1| flagellar basal-body rod protein FlgG [Burkholderia gladioli BSR3] gi|327370976|gb|AEA62332.1| flagellar basal-body rod protein FlgG [Burkholderia gladioli BSR3] Length = 262 Score = 166 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 88/259 (33%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + ++ +++N++N T GF+ + F +++ Sbjct: 1 MNRSLYIAATGMNAQQAQMDVISNNLANVSTNGFKGSRAVFEDLLYQTVRQPGANSTQQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+ TG D A++G +F + P TRDG F Sbjct: 61 ELPSGLQLGTGVQQVATERLYTQGALTQTGNSRDIAIDGSGFFQVLMPDGTTAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 + G LV++SG + + V S I M + + Sbjct: 121 HPNNQGQLVTSSGYQVLPAITVPQNAQSLTIGTDGVVTVTQPGSTNAVQIGAMQIATFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 +G + + ++ +G++E SN N + E+ MI + + Sbjct: 181 PEGLQALGQNLFAETTSSGVPNVTTPGLNGAGSLNQGYVESSNVNVVQELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + Sbjct: 241 EINSKAVTTSDQMLQTVTQ 259 >gi|326202442|ref|ZP_08192311.1| fagellar hook-basal body protein [Clostridium papyrosolvens DSM 2782] gi|325987560|gb|EGD48387.1| fagellar hook-basal body protein [Clostridium papyrosolvens DSM 2782] Length = 270 Score = 166 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 51/270 (18%), Positives = 107/270 (39%), Gaps = 29/270 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + + +++N++N +T G++ + +F +++ + Sbjct: 1 MMRALYTAGSGMKAQQFNVDVISNNLANVNTTGYKKERAEFKDLLYQTMDRAYVLNGGGK 60 Query: 54 ----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKV 108 Q + E G+ TG+ LDFA++G+ +F + P+G + TRDG FK+ Sbjct: 61 PVNLQVGHGTVVSSTIRNFENGTPEQTGSTLDFAIDGEGFFTIMGPQGTVKYTRDGSFKL 120 Query: 109 T---DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI--------AT 157 + D ++ S Y VLD + I + + + K T Sbjct: 121 SITEDGMKKLTTSDGYAVLDNSGGEILFDPEVKTSELSVSPRGEMSYKNAEGVSVPMDQT 180 Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQ 212 +G+ + N+ S N ++ + +K+GFLE SN + EM + Sbjct: 181 IGMVTFPNKYALEAVGNNLYSSNSATGEPLQVSEDENAKSIMKQGFLESSNVQVVDEMVK 240 Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 +I + + + I ++ + + N+ Sbjct: 241 LIVAQRAYEVSSKAIQSSDDML-QIANNLR 269 >gi|254521223|ref|ZP_05133278.1| flagellar basal-body rod protein FlgG [Stenotrophomonas sp. SKA14] gi|219718814|gb|EED37339.1| flagellar basal-body rod protein FlgG [Stenotrophomonas sp. SKA14] Length = 257 Score = 166 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 51/257 (19%), Positives = 87/257 (33%), Gaps = 20/257 (7%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID----------- 53 I A + R+S V++N++NT+T GF+ + F +++ Sbjct: 1 MWIAKTGLDAQQMRMSVVSNNLANTNTTGFKQDRASFEDLLYQQVRQPGGSSSAQTQLPT 60 Query: 54 --QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTD 110 Q + V + E G TG LD + G +F ++ P TRDG FK+ Sbjct: 61 GLQLGTGVRVVATAKNFEQGGQQQTGRALDVMVNGRGFFEVQMPDGSSAYTRDGSFKINQ 120 Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDMSQGF 169 D LV+ SG + + K + + L G Sbjct: 121 DSELVTNSGYPVQPGIQIPEGAQSVTIGTDGTISVKMADGAASVEVGALTLTDFVNPAGL 180 Query: 170 VRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224 R + P ++ + TV +G LE SN N + E+ MI + + Sbjct: 181 QARGENLFLETTASGPAQNGNPGLNGLGTVVQGALEGSNVNVVEELVSMIETQRAYEMNA 240 Query: 225 TLIDENEKSMLEAIRNI 241 I + + + Sbjct: 241 KAISTTDSMLGYLNNKL 257 >gi|241203106|ref|YP_002974202.1| flagellar basal body rod protein FlgG [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240856996|gb|ACS54663.1| flagellar basal-body rod protein FlgG [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 262 Score = 166 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 92/261 (35%), Gaps = 21/261 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----------- 50 + I A + L +A+N++N +T GF+ + +FS+++ + Sbjct: 1 MRALAIAATGMDAQQTNLEVIANNIANINTTGFKRARAEFSDLLYQTERAKGVANRANQA 60 Query: 51 ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRF 106 + V + G TG +LD AL G +F ++ + + +R G F Sbjct: 61 VVPEGANIGLGVQTSAVRNLHLQGELTQTGNDLDVALIGKGFFQIQSTDGTTLYSRAGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 D G LV+ G + + V K + + + + L Sbjct: 121 NKNDQGQLVTIDGYEVLPGITIPTGSTELTISRSGQVTAKLPGATEATELGQLTLADFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ + +K+G+LE SN + + E+ ++I + + Sbjct: 181 EAGLQPLGDNLFQETPASGEAVIGNPDEEGFAYMKQGYLESSNVDPVKEITELISAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + +I ++ +N+ Sbjct: 241 EMNSKVITTADEMASIVSKNL 261 >gi|22127325|ref|NP_670748.1| flagellar basal body rod protein FlgG [Yersinia pestis KIM 10] gi|45442798|ref|NP_994337.1| flagellar basal body rod protein FlgG [Yersinia pestis biovar Microtus str. 91001] gi|51597635|ref|YP_071826.1| flagellar basal body rod protein FlgG [Yersinia pseudotuberculosis IP 32953] gi|108809053|ref|YP_652969.1| flagellar basal body rod protein FlgG [Yersinia pestis Antiqua] gi|108810750|ref|YP_646517.1| flagellar basal body rod protein FlgG [Yersinia pestis Nepal516] gi|145597819|ref|YP_001161895.1| flagellar basal body rod protein FlgG [Yersinia pestis Pestoides F] gi|150260247|ref|ZP_01916975.1| lateral flagellar basal body rod protein [Yersinia pestis CA88-4125] gi|153947407|ref|YP_001399636.1| flagellar basal body rod protein FlgG [Yersinia pseudotuberculosis IP 31758] gi|162421910|ref|YP_001604845.1| flagellar basal body rod protein FlgG [Yersinia pestis Angola] gi|165925150|ref|ZP_02220982.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar Orientalis str. F1991016] gi|165939077|ref|ZP_02227629.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar Orientalis str. IP275] gi|166008679|ref|ZP_02229577.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar Antiqua str. E1979001] gi|166212222|ref|ZP_02238257.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar Antiqua str. B42003004] gi|167399088|ref|ZP_02304612.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167419078|ref|ZP_02310831.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425222|ref|ZP_02316975.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167466335|ref|ZP_02331039.1| flagellar basal-body rod protein FlgG [Yersinia pestis FV-1] gi|186896769|ref|YP_001873881.1| flagellar basal body rod protein FlgG [Yersinia pseudotuberculosis PB1/+] gi|218927914|ref|YP_002345789.1| flagellar basal body rod protein FlgG [Yersinia pestis CO92] gi|229837410|ref|ZP_04457573.1| Flagellar basal-body rod protein flgG [Yersinia pestis Pestoides A] gi|229840625|ref|ZP_04460784.1| Flagellar basal-body rod protein flgG [Yersinia pestis biovar Orientalis str. PEXU2] gi|229842824|ref|ZP_04462976.1| Flagellar basal-body rod protein flgG [Yersinia pestis biovar Orientalis str. India 195] gi|229900947|ref|ZP_04516071.1| Flagellar basal-body rod protein flgG [Yersinia pestis Nepal516] gi|270487670|ref|ZP_06204744.1| flagellar basal-body rod protein FlgG [Yersinia pestis KIM D27] gi|294502791|ref|YP_003566853.1| putative flagellar basal-body rod protein [Yersinia pestis Z176003] gi|21960406|gb|AAM86999.1|AE013948_7 flagellar biosynthesis protein, cell-distal portion of basal-body rod [Yersinia pestis KIM 10] gi|45437664|gb|AAS63214.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar Microtus str. 91001] gi|51590917|emb|CAH22573.1| putative flagellar basal-body rod protein [Yersinia pseudotuberculosis IP 32953] gi|108774398|gb|ABG16917.1| flagellar basal-body rod protein [Yersinia pestis Nepal516] gi|108780966|gb|ABG15024.1| putative flagellar basal-body rod protein [Yersinia pestis Antiqua] gi|115346525|emb|CAL19402.1| putative flagellar basal-body rod protein [Yersinia pestis CO92] gi|145209515|gb|ABP38922.1| flagellar basal-body rod protein [Yersinia pestis Pestoides F] gi|149289655|gb|EDM39732.1| lateral flagellar basal body rod protein [Yersinia pestis CA88-4125] gi|152958902|gb|ABS46363.1| flagellar basal-body rod protein FlgG [Yersinia pseudotuberculosis IP 31758] gi|162354725|gb|ABX88673.1| flagellar basal-body rod protein FlgG [Yersinia pestis Angola] gi|165913033|gb|EDR31658.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar Orientalis str. IP275] gi|165923350|gb|EDR40501.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar Orientalis str. F1991016] gi|165992018|gb|EDR44319.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar Antiqua str. E1979001] gi|166206968|gb|EDR51448.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar Antiqua str. B42003004] gi|166963072|gb|EDR59093.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051592|gb|EDR63000.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167055985|gb|EDR65766.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar Mediaevalis str. K1973002] gi|186699795|gb|ACC90424.1| flagellar basal-body rod protein FlgG [Yersinia pseudotuberculosis PB1/+] gi|229682286|gb|EEO78378.1| Flagellar basal-body rod protein flgG [Yersinia pestis Nepal516] gi|229690091|gb|EEO82148.1| Flagellar basal-body rod protein flgG [Yersinia pestis biovar Orientalis str. India 195] gi|229696991|gb|EEO87038.1| Flagellar basal-body rod protein flgG [Yersinia pestis biovar Orientalis str. PEXU2] gi|229705533|gb|EEO91543.1| Flagellar basal-body rod protein flgG [Yersinia pestis Pestoides A] gi|262360823|gb|ACY57544.1| putative flagellar basal-body rod protein [Yersinia pestis D106004] gi|262364768|gb|ACY61325.1| putative flagellar basal-body rod protein [Yersinia pestis D182038] gi|270336174|gb|EFA46951.1| flagellar basal-body rod protein FlgG [Yersinia pestis KIM D27] gi|294353250|gb|ADE63591.1| putative flagellar basal-body rod protein [Yersinia pestis Z176003] gi|320016709|gb|ADW00281.1| Flagellar basal-body rod protein flgG [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 261 Score = 166 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 92/261 (35%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M ++ + A + ++ +++N++N +T GF+ +V F+++ + Sbjct: 1 MNSALWVSKTGLAAQDAKMGAISNNLANVNTDGFKRDRVVFADLFYQNQRTPGAPLDQNN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRF 106 Q S V VG+ T ++D A+ G +F +E+ G I TR G Sbjct: 61 TTPSGIQFGSGVQIVGTQKQFTVGNIKVTKGDMDVAITGQGFFQIETADGGIAYTRAGNL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 DG LV+A G + + + V + + + L + Sbjct: 121 TTNADGVLVNAQGMPLIPQIELPTGSKQLHIGKDGTVTATVGGETEPVEVGQITLVNFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + +++G LE SN + EM MI + + + Sbjct: 181 PAGLEAIGGNLYRETAASGEAVEGVPGEEAFGQLEQGALEGSNVQVVEEMVDMITVQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 ++ + + + + Sbjct: 241 EMNAKMVSAADDMLKFVSQKL 261 >gi|326796595|ref|YP_004314415.1| flagellar basal-body rod protein FlgG [Marinomonas mediterranea MMB-1] gi|326547359|gb|ADZ92579.1| flagellar basal-body rod protein FlgG [Marinomonas mediterranea MMB-1] Length = 261 Score = 166 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 44/261 (16%), Positives = 91/261 (34%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 MQT+ A++++LS +++N++N T GF+ + F ++ Sbjct: 1 MQTALWTAKTGLTAMDRQLSVISNNLANVSTTGFKKERAVFENLMYQTLKSPGGLSAQNT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106 Q + V + E G + T LD A++G +F + TRDG F Sbjct: 61 ELPSGLQIGAGVRVTGMQKNFEEGDYNVTDRNLDVAIQGAGFFQITRSDGTTAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQKGKVIATMGLYSVDM 165 ++ +G +V +SG ++ + + I ++ + + Sbjct: 121 QLNSEGQMVDSSGNLLDPQISFDSDVVDITIGDDGTVSVLRAGETDQEEIGSITIANFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + +G LE SN NS+ E+ MI + + Sbjct: 181 PAGLYFLGGNLYEETSASGAPIVGVPGEEGLGELGQGMLEASNVNSVEELVNMITTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + +I + + + + Sbjct: 241 EMNSKVISTADGMLGFVTQQL 261 >gi|238927617|ref|ZP_04659377.1| flagellar basal body rod protein [Selenomonas flueggei ATCC 43531] gi|238884542|gb|EEQ48180.1| flagellar basal body rod protein [Selenomonas flueggei ATCC 43531] Length = 264 Score = 166 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 42/263 (15%), Positives = 89/263 (33%), Gaps = 23/263 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + ++ VA N++N +T G + ++ +F ++V + Sbjct: 1 MMRALWSAASGMKAQQSQMDVVAHNIANVNTYGGKKVRAEFQDLVYQTLREAGARNGADS 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q G+ +T D ++G+ +F + P TRDG + Sbjct: 61 QYPTALQIGLGTRLAATQRVFTQGALQTTDNPTDIGIQGEGFFRVTMPDGTTAYTRDGTW 120 Query: 107 KVTDDGSLVSASGKYPVLD---MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 K+ D +V++ G + P+ V + + + + L Sbjct: 121 KLDSDRRMVTSDGYLLADGITIGQNAPLDSITISGDGRVSYREAGQNQQQEAGQITLARF 180 Query: 164 DMSQGFVRRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 G + + + + T+ +G LE SN + EM MI + Sbjct: 181 VNPAGLTAVGKNLFVVSDASGEAIESNPGEDGAGTLTQGTLEMSNVQIVEEMVNMIVSQR 240 Query: 219 KFNSITTLIDENEKSMLEAIRNI 241 + S + I ++ + E + Sbjct: 241 AYESNSKAITTSDSML-EIANQL 262 >gi|167626157|ref|YP_001676451.1| flagellar basal-body rod protein FlgG [Shewanella halifaxensis HAW-EB4] gi|167356179|gb|ABZ78792.1| flagellar basal-body rod protein FlgG [Shewanella halifaxensis HAW-EB4] Length = 261 Score = 166 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 104/261 (39%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 MQ++ + A + +++T+A+N++N +T GF+ +V F+++ ++ Sbjct: 1 MQSALWVSKTGLTAQDTKMTTIANNLANVNTTGFKRDRVAFNDLFYQVQRQPGGQVDEQN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 Q + G ++T +LD A+EG +F +E G + +RDG+F Sbjct: 61 ELPSGLQLGTGTRVVGTQKVFTPGDMLTTNQQLDMAIEGQGFFQIEEANGELSYSRDGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 +G +V++ G V ++ + V + + + + L + Sbjct: 121 YRNSEGLMVTSQGLPLVPNIEIPEEALTVTIASDGIVSAQMAGQTDAQELGQITLVNFTN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G R N+ + + +++G LE +N N + EM +MI + + Sbjct: 181 PAGLEARGNNLYRETGASGAAVEGIAGDQALGQIRQGALEGANVNVVEEMVEMISTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 ++ ++ + + + Sbjct: 241 EMNAKVVSASDDMLKFLNQAL 261 >gi|167585196|ref|ZP_02377584.1| flagellar basal-body rod protein FlgG [Burkholderia ubonensis Bu] Length = 262 Score = 166 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 92/259 (35%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + ++ +++N++N T G++ + F +++ Sbjct: 1 MNRSLYIAATGMNAQQAQMDVISNNLANVSTNGYKGSRAVFEDLLYQTIRQPGANSTQQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V GS TG D A++G +F + P G TRDG F Sbjct: 61 ELPSGLQLGTGVQQVATERLYTQGSLQQTGNSKDLAIDGAGFFQVLMPDGTNAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 + G LV++SG + + + V K S I ++ + + Sbjct: 121 QTNAQGQLVTSSGYQVLPAITVPQNATALTIGKDGVVSVKQAGSNNAVQIGSIQIATFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + ++ +G++E SN N + E+ MI + + Sbjct: 181 PAGLEAKGENLFAETTSSGAPNVSQPGLNGAGSLNQGYVEASNVNVVQELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + Sbjct: 241 EINSKAVTTSDQMLQNVTQ 259 >gi|157147100|ref|YP_001454419.1| flagellar basal body rod protein FlgG [Citrobacter koseri ATCC BAA-895] gi|157084305|gb|ABV13983.1| hypothetical protein CKO_02877 [Citrobacter koseri ATCC BAA-895] Length = 261 Score = 166 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 44/261 (16%), Positives = 93/261 (35%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + I A + +++ +++N++N +T GF+ + F+++ + Sbjct: 1 MNPALWISKTGLAAQDAKMTAISNNLANVNTTGFKRDRAMFADLFYQNQRTPGGQLDQNN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V VGS +TG D A+ G +F +E+ I TR G F Sbjct: 61 IAPTGIQYGTGVKIVGTQKEFTVGSIQNTGQTFDVAITGQGFFQVETADGDIAYTRAGNF 120 Query: 107 KVTDDGSLVSASGKY-PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 + T DG L +A G ++ Q + + + + L + Sbjct: 121 QKTPDGVLTNAQGLPLVPQIELPENVKDLQIGKDGTITATVAGETDPVELGQLTLVNFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + +++G LE SN + EM MI + + + Sbjct: 181 PAGLEAIGGNLYRETAASGEAVEGVPGEDALGQLEQGSLEGSNVQVVEEMVDMITVQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 ++ + + +++ Sbjct: 241 EMNAKMVSAADDMLKFVTQSM 261 >gi|82544456|ref|YP_408403.1| flagellar basal body rod protein FlgG [Shigella boydii Sb227] gi|81245867|gb|ABB66575.1| cell-distal portion of basal-body rod [Shigella boydii Sb227] gi|320186975|gb|EFW61688.1| Flagellar basal-body rod protein FlgG [Shigella flexneri CDC 796-83] gi|332094081|gb|EGI99133.1| flagellar basal-body rod protein FlgG [Shigella boydii 3594-74] Length = 260 Score = 166 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 42/259 (16%), Positives = 87/259 (33%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M +S I A + + +A+N++N T GF+ + F +++ Sbjct: 1 MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+ T D A++G +F + P TRDG F Sbjct: 61 TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGSSAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V +G LV+A G + + V + + + L + Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + + +G++E SN N E+ MI + + + Sbjct: 181 DTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + ++ + + Sbjct: 241 EINSKAVSTTDQMQQKLTQ 259 >gi|332533173|ref|ZP_08409042.1| flagellar basal-body rod protein FlgG [Pseudoalteromonas haloplanktis ANT/505] gi|332037455|gb|EGI73909.1| flagellar basal-body rod protein FlgG [Pseudoalteromonas haloplanktis ANT/505] Length = 262 Score = 166 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 41/262 (15%), Positives = 93/262 (35%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + I A + +S +++N++N TVG++ + F +++ N + Sbjct: 1 MNPALWISKTGLDAQQTDISVISNNLANASTVGYKKSRAIFEDLLYQNINQPGGRSSQDT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + G+ ++T LD+ + G+ +F + P I +R+G+F Sbjct: 61 EMPSGLMLGAGAKVVANQKEFTQGNMLTTENSLDWMISGEGFFEVLQPDGNIAYSRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI--SQKGKVIATMGLYSVD 164 DG +V++ Y + +VP + + VI + + Sbjct: 121 TTDGDGRIVTSGAGYVIQPEMNVPDDAQSITVSQDGEVSVRVAGQADNVVIGQLTISDFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + + + ++ +G LE SN N E+ +I + Sbjct: 181 NPSGLEPIGQNLYTETAVSGAPVQGNPGVEGLGSIIQGSLETSNVNVTEELVNLIETQRI 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I ++ M + + Sbjct: 241 YEMNSKVISAVDEMMSYINQQL 262 >gi|226321475|ref|ZP_03797002.1| flagellar hook-basal body complex protein [Borrelia burgdorferi Bol26] gi|226233271|gb|EEH32023.1| flagellar hook-basal body complex protein [Borrelia burgdorferi Bol26] Length = 282 Score = 166 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 48/280 (17%), Positives = 105/280 (37%), Gaps = 38/280 (13%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51 M + +A ++L TV++N++N D +G++ F E++ ND Sbjct: 1 MVRGIYTAASGMMAERRKLDTVSNNLANIDLIGYKKDLSIQKAFPEMLIRRLNDDGLYKF 60 Query: 52 ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101 + + + V + Y E G +TG LD AL +F +++ G T Sbjct: 61 PKGHLETAPVVGKIGTGVEENEIYTVFEQGPLKTTGNPLDLALTDQGFFVIQTSDGERYT 120 Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI------------- 148 R+G F + +G LV+ SG + + + ++ Sbjct: 121 RNGSFTIGKEGILVTKSGFPVLGEKGYIYLKKNNFKITHQGQVFHNSNFESDPKRLVSEY 180 Query: 149 ---SQKGKVIATMGLYSVDMSQGFVRRENSGIS---PNIPPTPLEDLSGVTVKRGFLEDS 202 + +++ T+ + + + + ++ NS + ++ ++ LE S Sbjct: 181 ENSWENYELLDTIRIVNFENPRFLKKQGNSLWIDTKTSGKAQEIDISLRPKIETETLEAS 240 Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 N N++ EM MI + + + + + + + + I I Sbjct: 241 NVNAVKEMVLMIEINRAYEANQKTLQTEDSLLGKLINEIG 280 >gi|116694221|ref|YP_728432.1| flagellar basal body rod protein FlgG [Ralstonia eutropha H16] gi|113528720|emb|CAJ95067.1| flagellar basal body rod protein [Ralstonia eutropha H16] Length = 261 Score = 166 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 86/259 (33%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + ++ +++N++N T GF+ + F E++ Sbjct: 1 MIRSLWIAKTGLDAQQTQMDVISNNLANVSTNGFKRGRAVFEELMYQTIRQPGALSSDQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+ TG D A+ G +F + P TRDG F Sbjct: 61 TLPSGMQLGTGVRPVATERIHTQGNPQQTGNAKDVAILGQGFFQVALPDGTTAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V +G LV++SG + + V S + + L + Sbjct: 121 QVDQNGQLVTSSGFVIQPAITIPANTLSMTIARDGTVSVTQPGSSANVQVGQLQLATFMN 180 Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + V++ ++E SN N + E+ MI + + Sbjct: 181 PAGLESMGENLYVQTDASGAPNTTVPGLNGAGVVQQNYVEASNVNVVEELVSMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + Sbjct: 241 EINSKAVQASDQMLQRLSQ 259 >gi|310641552|ref|YP_003946310.1| fagellar hook-basal body protein [Paenibacillus polymyxa SC2] gi|309246502|gb|ADO56069.1| Fagellar hook-basal body protein [Paenibacillus polymyxa SC2] Length = 272 Score = 166 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 51/269 (18%), Positives = 99/269 (36%), Gaps = 30/269 (11%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ + +L + +N++N +T GF++ +V F +++ + Sbjct: 1 MLRSMYSGVSGMKGFQTKLDVIGNNIANVNTTGFKSSRVMFKDILSQTSSGASASGEETA 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI---ILTRDGR 105 Q GS ++T D L GD +F ++ LTR G Sbjct: 61 GSNAKQIGLGSTVSSIDTLHLPGSAMTTNNPTDLRLNGDGFFLVKMNADQEAPYLTRAGD 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-----SQKGKVIATMGL 160 F + + LV++ G + VPI + F++ + G I S + +G+ Sbjct: 121 FHIDGNRHLVTSDGFFVADSGGGVPITLADDVTAFSISQDGTIVQTLASGETDNATKIGV 180 Query: 161 YSVDMSQGFVRRENSGISPNIP----------PTPLEDLSGVTVKRGFLEDSNANSMYEM 210 V +G + S + D + G LE SN + E Sbjct: 181 TKVINPEGLEKIGGSLYRATVNSGNEGEITAMEANSADDGTGAIISGQLEMSNVDLTGEF 240 Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +MI + F + + +I +++ + E + Sbjct: 241 TEMIVAQRGFQANSRIITTSDEVLQEVVN 269 >gi|260886211|ref|ZP_05897474.1| flagellar basal-body rod protein FlgG [Selenomonas sputigena ATCC 35185] gi|330839793|ref|YP_004414373.1| flagellar basal-body rod protein FlgG [Selenomonas sputigena ATCC 35185] gi|260863930|gb|EEX78430.1| flagellar basal-body rod protein FlgG [Selenomonas sputigena ATCC 35185] gi|329747557|gb|AEC00914.1| flagellar basal-body rod protein FlgG [Selenomonas sputigena ATCC 35185] Length = 263 Score = 166 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 51/263 (19%), Positives = 96/263 (36%), Gaps = 24/263 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + + A + + VA N++N +T G + ++ +F ++V + Sbjct: 1 MMRALWSAASGMKAQQDNMDVVAHNIANVNTFGSKKVRAEFQDLVYQNLRAAGAQSGADS 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + G+ S+G D A++G+ +F +E P I TRDG F Sbjct: 61 QYPTGLAIGLGTRTAATQRIFTQGNLQSSGNPTDVAIQGEGFFRIEMPDGTIAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV--IATMGLYSVD 164 K+ + LV+ G + I G+ G V + + L Sbjct: 121 KLDQNRRLVTTDGYPLADGITLDANAPSDSIVIAGDGQVSCTPAGGNVTAVGQITLSRFV 180 Query: 165 MSQGF------VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 G + +E I P E+ + T+ +G +E SN + EM MI + Sbjct: 181 NPAGLFAIGKNLFKETDASGNAIDSNPGEEGA-GTLTQGVVEMSNIQIVEEMVNMIVAQR 239 Query: 219 KFNSITTLIDENEKSMLEAIRNI 241 + S + I ++ + E ++ Sbjct: 240 AYESNSKAITTSDSML-EIANSL 261 >gi|167034941|ref|YP_001670172.1| flagellar basal body rod protein FlgG [Pseudomonas putida GB-1] gi|166861429|gb|ABY99836.1| flagellar basal-body rod protein FlgG [Pseudomonas putida GB-1] Length = 261 Score = 166 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 48/261 (18%), Positives = 98/261 (37%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + L+ +++N++N T GF+ + +F++++ IK Sbjct: 1 MLPALWVAKTGLSAQDTNLTVISNNLANVSTTGFKRDRAEFADLLYQIKRQPGAQSTQDS 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 Q + V S GS +T LD A+ G +F + P G + TRDG F Sbjct: 61 ELPSGLQVGTGVRIVGTQKSFVAGSLQTTENPLDMAVNGRGFFQILQPDGTVSYTRDGTF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 + DG +V+A+G + Q + V + +VI + Sbjct: 121 HLNSDGQIVTANGYALEPAVVVPNDAQTFTVGQDGTVSITTAGNPAAQVIGNIQTADFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ + T ++ LE+SN +++ E+ MI + + Sbjct: 181 PAGLQAIGDNLFLETAASGAPQVGTPGLNGFGTTQQQTLENSNVSTVEELVNMITTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + +I ++ + + + Sbjct: 241 EMNSKVISTADQMLSFVTQQL 261 >gi|150395485|ref|YP_001325952.1| flagellar basal body rod protein FlgG [Sinorhizobium medicae WSM419] gi|150027000|gb|ABR59117.1| flagellar basal-body rod protein FlgG [Sinorhizobium medicae WSM419] Length = 262 Score = 166 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 44/262 (16%), Positives = 91/262 (34%), Gaps = 21/262 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55 + +I A + L +A+N++N +T G++ + +FS+++ + Sbjct: 1 MKALSIAATGMNAQQLNLEVIANNIANINTTGYKRARAEFSDLLYQTERAQGVPNRSNQA 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 V + GS ++TG + D AL G WF +E+P + TR G F Sbjct: 61 IVPEGAIIGLGVQTSAVRNLHIQGSLVNTGNDYDLALVGRGWFQIETPDGETVYTRSGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 G LV+ G V + V + + + I + + + Sbjct: 121 NTNATGQLVTIDGYTVVPGVTVPQDATEIVFTSSGQVMVRIGNDTELQEIGQLTVANFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + +K+ +LE SN + + E+ +I + + Sbjct: 181 EAGLEPMGENLFRQTPASGDAIVGTPADPGFAQIKQNYLESSNVDPVKEITDLISAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNIA 242 + +I ++ +N+ Sbjct: 241 EMNSKIIQAADEMAATVSKNLR 262 >gi|33601543|ref|NP_889103.1| flagellar basal body rod protein FlgG [Bordetella bronchiseptica RB50] gi|33575979|emb|CAE33058.1| flagellar basal-body rod protein [Bordetella bronchiseptica RB50] Length = 261 Score = 166 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 40/260 (15%), Positives = 90/260 (34%), Gaps = 21/260 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S + + + +++N++N T GF+ + F +++ Sbjct: 1 MMRSLWVAKTGLEGQQTSMDVISNNLANVQTNGFKRGRAVFQDLMYQTLRQPGAQVGDAN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V G+ +TG E+D A++G + +E P G TRDG Sbjct: 61 QLPSGLQLGTGVQVAATQRVFSQGNMNNTGGEMDIAIQGRGFLQVELPDGTQAYTRDGSL 120 Query: 107 KVTDDGSLVSASGK--YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 +V +G L +A G P +++ + + + + + I + + + Sbjct: 121 QVDQNGQLTTAGGYVIQPPINVPDNALSLTIGKDGTVSVTQPGAAGTNVQIGQLQVATFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + P + + ++E SN N E+ MI + Sbjct: 181 NPTGLQSVGENLYLETDSSGPANLLQPGIDGAGQILQQYVETSNVNVAEELVNMITTQRA 240 Query: 220 FNSITTLIDENEKSMLEAIR 239 + + + +++ + + Sbjct: 241 YEMNSKAVKTSDEMLARLTQ 260 >gi|144897832|emb|CAM74696.1| flagellar basal body distal rod protein; FlgG [Magnetospirillum gryphiswaldense MSR-1] Length = 261 Score = 166 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 51/261 (19%), Positives = 101/261 (38%), Gaps = 22/261 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 S NI LA + + +++N++N +T + + +FS+++ + Sbjct: 1 MRSLNIAATGMLAQQTNVEVISNNIANMNTTAYTKRRPEFSDLLYQNLRRVGAASSDAGT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q V + Y E GS ST LD A++G + + P TRDG F Sbjct: 61 IVPTGVQLGLGVKTTAVYRITEQGSVQSTDNTLDVAIQGKGYLQIRLPSGDTAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 ++++ G +V+ G + + + V K + S V+ + L + Sbjct: 121 QLSEAGQIVTHEGYTVLPGITVPNNAVGISINASGQVMVKVDGSIDQTVVGQLQLANFAN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLS-----GVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G R ++ + + T+ +GFLE SN N + E+ +I + + Sbjct: 181 EAGLEARGDNLFLETPASGGVLAGNPGSPGYGTLLQGFLETSNVNVVAEVTNLISAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + +I +++ M I + Sbjct: 241 EMNSKVIQTSDEMM-STINQL 260 >gi|26991074|ref|NP_746499.1| flagellar basal body rod protein FlgG [Pseudomonas putida KT2440] gi|24986108|gb|AAN69963.1|AE016634_12 flagellar basal-body rod protein FlgG [Pseudomonas putida KT2440] Length = 261 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 47/261 (18%), Positives = 96/261 (36%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + L+ +++N++N T GF+ + +F++++ IK Sbjct: 1 MLPALWVAKTGLSAQDTNLTVISNNLANVSTTGFKRDRAEFADLLYQIKRQPGAQSTQDS 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 Q + V S GS +T LD A+ G +F + P G + TRDG F Sbjct: 61 ELPSGLQVGTGVRIVGTQKSFVAGSLQTTDNPLDMAVNGRGFFQILQPDGTVSYTRDGTF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 + DG +V+ +G + Q + V + +VI + Sbjct: 121 HLNSDGQIVTDNGYALEPAIVVPNDAQTFTVGQDGTVSITTAGNPAAQVIGNIQTADFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ + T + LE+SN +++ E+ MI + + Sbjct: 181 PAGLQAIGDNLFLETAASGAPQVGTPGLNGFGTTLQQTLENSNVSTVEELVNMITTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + +I ++ + + + Sbjct: 241 EMNSKVISTADQMLSFVTQQL 261 >gi|317406199|gb|EFV86448.1| flagellar basal-body rod protein FlgG [Achromobacter xylosoxidans C54] Length = 261 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 42/260 (16%), Positives = 86/260 (33%), Gaps = 21/260 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I + + +++N++N T GF+ + F +++ Sbjct: 1 MMRSLWIAKTGLEGQQTSMDVISNNLANVATNGFKRGRAVFQDLMYQTLRQPGAQVGDAT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + G +TG ELD A+ G + +E P G TRDG Sbjct: 61 QLPSGLQLGTGARVAATERIHTTGGLNNTGGELDVAINGRGFLQVELPDGTQAYTRDGAL 120 Query: 107 KVTDDGSLVSASGK--YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 + +G L + SG P +++ + I + + + I + + + Sbjct: 121 QRDQNGQLTTVSGYVIQPPMNVPDNALSISIGKDGIVSVTQPGAAGVNVQIGQLQIATFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + P T + ++E SN N E+ MI + Sbjct: 181 NPTGLQSVGENLYLETDASGPANLLQPGVDGAGTFMQNYVETSNVNVAEELVNMITTQRA 240 Query: 220 FNSITTLIDENEKSMLEAIR 239 + + + +++ + + Sbjct: 241 YEMNSKAVKTSDEMLARLTQ 260 >gi|291276427|ref|YP_003516199.1| flagellar basal-body rod protein [Helicobacter mustelae 12198] gi|290963621|emb|CBG39453.1| flagellar basal-body rod protein [Helicobacter mustelae 12198] Length = 262 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 45/256 (17%), Positives = 86/256 (33%), Gaps = 20/256 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S L + ++ T ++N++N +TVG++ + +F+++ Sbjct: 1 MMRSLYSATTGMLGQQLQIDTTSNNIANVNTVGYKRQRAEFNDLFYQNLQYAGTATSETT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 V G GS T LD A+ G +F + P TR G F Sbjct: 61 LSPTGIEVGLGVRPGAIAKMFSQGSPKETENNLDMAITGKGFFQVRLPDGTTAYTRSGNF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG-KVIATMGLYSVDM 165 K+ D+G++V++ G + + + + G I + L Sbjct: 121 KLDDNGNVVTSEGYALIPQITVPQDATQINIGNDGTVSVVQGNNGGSNTIGQIELADFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ +K+GFLE SN + EM +I + + Sbjct: 181 PAGLHSLGDNLYLNTSASGAPITGVAGTNGMGQIKQGFLELSNVRLVEEMTDLITGQRAY 240 Query: 221 NSITTLIDENEKSMLE 236 + + I + + Sbjct: 241 EANSKSIQTADAMLQT 256 >gi|304438315|ref|ZP_07398256.1| flagellar basal-body rod protein FlgG [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304368681|gb|EFM22365.1| flagellar basal-body rod protein FlgG [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 264 Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats. Identities = 42/263 (15%), Positives = 88/263 (33%), Gaps = 23/263 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + ++ VA N++N +T G + ++ +F ++V + Sbjct: 1 MMRALWSAASGMKAQQSQMDVVAHNIANVNTYGGKKVRAEFQDLVYQTLREAGARNGADS 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q G+ +T D ++G+ +F + P TRDG + Sbjct: 61 QYPTALQIGLGTRLAATQRVFTQGALQTTDNPTDIGIQGEGFFRVTMPDGTTAYTRDGTW 120 Query: 107 KVTDDGSLVSASGKYPVLD---MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 K+ D +V+ G + P+ V + + + + L Sbjct: 121 KLDSDRRMVTTDGYLLADGITIGQNAPLDSITISGDGRVSYREAGQNQQQEAGQITLARF 180 Query: 164 DMSQGFVRRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 G + + + + T+ +G LE SN + EM MI + Sbjct: 181 VNPAGLTSVGKNLFVVSDASGEAIESNPGEDGAGTLTQGTLEMSNVQIVEEMVNMIVSQR 240 Query: 219 KFNSITTLIDENEKSMLEAIRNI 241 + S + I ++ + E + Sbjct: 241 AYESNSKAITTSDSML-EIANQL 262 >gi|268680164|ref|YP_003304595.1| flagellar basal-body rod protein FlgG [Sulfurospirillum deleyianum DSM 6946] gi|268618195|gb|ACZ12560.1| flagellar basal-body rod protein FlgG [Sulfurospirillum deleyianum DSM 6946] Length = 262 Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats. Identities = 46/256 (17%), Positives = 101/256 (39%), Gaps = 20/256 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S +A + ++ T ++N+SN +T+G++ + +F++++ Sbjct: 1 MIRSLYTAATGMIAQQTQIDTTSNNISNVNTIGYKKQRAEFADLMYQTMTYAGTSTSATS 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 + V G+F TG LD A+ G+ +F ++ P G TR+G F Sbjct: 61 TSPTGIEVGLGVRPTAIAKQFTQGNFKETGNSLDVAITGNGFFQIQLPDGTTGYTRNGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 K+ +GS+V++ G + ++ + V + I + L + Sbjct: 121 KLDSEGSVVNSDGYRLLPELTIPEDATQITIGVNGVVSVLQAGQTETNEIGQIELANFIN 180 Query: 166 SQGFVR-RENSGISPNIPPTPLED----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G +N+ I+ + P+ ++ F+E SN + EM +I + + Sbjct: 181 PAGLHSLGDNNYINTSASGDPIVSEPGLNGLGQTRQQFVEMSNVQLVEEMTDLITGQRAY 240 Query: 221 NSITTLIDENEKSMLE 236 + + I +++ + Sbjct: 241 EANSKAITTSDEMLQT 256 >gi|312884832|ref|ZP_07744524.1| flagellar basal body rod protein FlgG [Vibrio caribbenthicus ATCC BAA-2122] gi|309367484|gb|EFP95044.1| flagellar basal body rod protein FlgG [Vibrio caribbenthicus ATCC BAA-2122] Length = 261 Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats. Identities = 44/261 (16%), Positives = 98/261 (37%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M ++ + A + +++ +++N++N +TVGF+ +V F ++ I+ Sbjct: 1 MHSALWVSKTGMAAQDTKMTAISNNLANVNTVGFKRDRVVFEDLFYTIQRQPGAQVDEVN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106 Q S V G+ +T +LD A+ G +F +E+ I+ TR+G+F Sbjct: 61 ELPSGVQLGSGVRVVGTQKVFTQGNTQNTNQDLDLAVMGKGFFQIENSDGQIMYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 +V +G +V++ G + + + V I + + + L Sbjct: 121 QVNSEGLMVNSQGLPLEPQIQIPDDALSISVGVDGTVTTTSAIDPTPQQVGQITLARFIN 180 Query: 166 SQGFVRRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + ++K+ LE SN + EM MI + + Sbjct: 181 PAGLEAVGGNLFRQTEASGLAEELIASEDGVGSIKQRALEGSNVQVVEEMVDMITTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 ++ + + +++ Sbjct: 241 EMNAKVVSAADDMLKFVAQSV 261 >gi|325274797|ref|ZP_08140825.1| flagellar basal body rod protein FlgG [Pseudomonas sp. TJI-51] gi|324100065|gb|EGB97883.1| flagellar basal body rod protein FlgG [Pseudomonas sp. TJI-51] Length = 261 Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats. Identities = 47/261 (18%), Positives = 97/261 (37%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + L+ +++N++N T GF+ + +F++++ +K Sbjct: 1 MLPALWVAKTGLSAQDTNLTVISNNLANVSTTGFKRDRAEFADLLYQVKRQPGAQSTQDS 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 Q + V S GS +T LD A+ G +F + P G + TRDG F Sbjct: 61 ELPSGLQVGTGVRIVGTQKSFVAGSLQTTENPLDMAVNGRGFFQILQPDGTVSYTRDGTF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 + DG +V+A+G + Q V + +VI + Sbjct: 121 HLNSDGQIVTANGYALEPAIVVPNDAQTFTVGTDGTVSITTAGNPAAQVIGNIQTADFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ + T ++ LE+SN +++ E+ MI + + Sbjct: 181 PAGLQAIGDNLFLETAASGAPQVGTPGLNGFGTTQQQTLENSNVSTVEELVNMITTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + +I ++ + + + Sbjct: 241 EMNSKVISTADQMLSFVTQQL 261 >gi|291613040|ref|YP_003523197.1| flagellar basal-body rod protein FlgG [Sideroxydans lithotrophicus ES-1] gi|291583152|gb|ADE10810.1| flagellar basal-body rod protein FlgG [Sideroxydans lithotrophicus ES-1] Length = 260 Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats. Identities = 41/259 (15%), Positives = 89/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + ++ +++N++N T GF+ + F +++ Sbjct: 1 MIRSLWISKTGLEAQQTQMDVISNNLANVSTNGFKRSRAVFEDLLYQNLRQPGAQSSQQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+ T +LD A++G +F + P TRDG F Sbjct: 61 QIPSGLQIGTGVRPVATERIHTQGNLQQTSNQLDVAIQGAGFFQVLMPDGTTAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 + G +V+++G + + V + + +M L + Sbjct: 121 QTDSQGQIVTSNGFVVQPAITIPANATTVTIGQDGVVTVTQPGATAPVQVGSMQLATFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + ++ +G++E SN N + E+ MI + + Sbjct: 181 PTGLESMGQNMYLETASSGTPSTNVPGTNGTGSISQGYVETSNVNVVEELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + I +++ + + + Sbjct: 241 EINSKAITVSDQMLQKLAQ 259 >gi|119469952|ref|ZP_01612757.1| flagellar biosynthesis; cell-distal portion of basal-body rod [Alteromonadales bacterium TW-7] gi|119446662|gb|EAW27935.1| flagellar biosynthesis; cell-distal portion of basal-body rod [Alteromonadales bacterium TW-7] Length = 262 Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats. Identities = 44/262 (16%), Positives = 94/262 (35%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + I A + +S +++N++N TVG++ + F +++ N + Sbjct: 1 MNPALWISKTGLDAQQTDISVISNNLANASTVGYKKSRAIFEDLLYQNINQPGGRSSQDT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + + G+ ++T LD+ + G +F + P I +R+G+F Sbjct: 61 EMPSGLMLGAGAKVVANQKNFSQGNMLTTENSLDWMISGPGFFEVLQPDGNIAYSRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFN--VGEKGEISQKGKVIATMGLYSVD 164 DG +V++ Y V +VP + V + VI + + Sbjct: 121 TTDGDGRIVTSGSGYVVQPEMNVPDDAQSITISQDGEVSVRISGQADNVVIGQLTISDFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + + + T+ +G LE SN N E+ +I + Sbjct: 181 NPSGLEPVGQNLYTETAVSGAPVQGNPGVEGLGTIIQGSLETSNVNVTEELVNLIETQRI 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I ++ M + + Sbjct: 241 YEMNSKVISAVDEMMSYINQQL 262 >gi|89098635|ref|ZP_01171517.1| flagellar hook protein [Bacillus sp. NRRL B-14911] gi|89086597|gb|EAR65716.1| flagellar hook protein [Bacillus sp. NRRL B-14911] Length = 270 Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats. Identities = 50/261 (19%), Positives = 98/261 (37%), Gaps = 22/261 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50 M S G++ + +L + +N++N +T G++ +V F ++V + Sbjct: 7 MLRSMYSGISGMKNFQTKLDVIGNNIANVNTFGYKKGRVTFKDMVSQTVSGATAGGAGVG 66 Query: 51 --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 + Q GS +TG LD ++GD +F ++ TR G F Sbjct: 67 GINPKQVGLGSQMSSIDTVDTQGSLQTTGRILDIGIQGDGYFRVQKGTNSYYTRAGNFYF 126 Query: 109 TDDGSLVSASGKYPVLDMASVPI-----QIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 + G++V+ASG+ + + QI + T+GL Sbjct: 127 DNSGNMVTASGEQVLNSNGTAINIPNISQIENLSIGADGSISFIQGGTSTTGPTIGLARF 186 Query: 164 DMSQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 + G + N+ P ++ ++ G LE SN + E +MI + Sbjct: 187 SNNGGLEKVGNNLYKSTANSGPAQNVLPGTSGAGSLVSGSLEMSNVDLSEEFTEMIVAQR 246 Query: 219 KFNSITTLIDENEKSMLEAIR 239 F + T +I +++ + E + Sbjct: 247 GFQANTRIITTSDEILQELVN 267 >gi|37525843|ref|NP_929187.1| flagellar basal-body rod protein FlgG (Distal rod protein) [Photorhabdus luminescens subsp. laumondii TTO1] gi|36785272|emb|CAE14213.1| Flagellar basal-body rod protein FlgG (Distal rod protein) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 260 Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats. Identities = 40/259 (15%), Positives = 83/259 (32%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + + +A+N++N T GF+ + F +++ Sbjct: 1 MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAIFEDLLYQNIRQPGAMSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V G+ T + A+ G +F ++ P G TRDG F Sbjct: 61 RLPSGLQIGTGVRPVATERIHSQGNLSETNNSHNVAIRGKGFFQVQLPDGTSAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 + +G L +A+G + V K + + + L + Sbjct: 121 QEDQNGQLTTANGFLIFPTITIPDNATDLTISSDGIVSVKVQGQSVPQQVGQFTLTTFIN 180 Query: 166 SQGFVRRENSGISPNIP-----PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + ++ ++E SN N E+ MI + + Sbjct: 181 DSGLESIGENLYVETSSSGVPIENTPGINGAGLLQHKYVETSNVNIAEELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + + Sbjct: 241 EVNSKAVSTSDQMLQKLTQ 259 >gi|312794500|ref|YP_004027423.1| fagellar hook-basal body protein [Caldicellulosiruptor kristjanssonii 177R1B] gi|312876698|ref|ZP_07736678.1| fagellar hook-basal body protein [Caldicellulosiruptor lactoaceticus 6A] gi|311796538|gb|EFR12887.1| fagellar hook-basal body protein [Caldicellulosiruptor lactoaceticus 6A] gi|312181640|gb|ADQ41810.1| fagellar hook-basal body protein [Caldicellulosiruptor kristjanssonii 177R1B] Length = 255 Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats. Identities = 52/258 (20%), Positives = 102/258 (39%), Gaps = 21/258 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS-----------EVVGAIK 49 M + + ++ + A+N++N T GF+ + + V + Sbjct: 1 MIRGIYTSASGMILNQKLMDITANNVANVSTTGFKRDVAQVESFRNMLVYRIYDKVSSPD 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP-----RGIILTRDG 104 N I + G +I T L+ A+ G+ +FA+E P + I+ TR+G Sbjct: 61 NAIGYMSLGSDVSRIVSDFSQGLYIKTDEPLNLAIRGNGFFAIEVPGSQGAQQILYTRNG 120 Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 F + G LV+ G Y + + Q + E+G I Q G+ + + + Sbjct: 121 AFTLNSRGELVTLDGFYVLG---QNGRIVLQNGGQVRIDEQGNIYQDGRFVDRLRIVDFQ 177 Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224 Q + N+ + + + +G+LE SN NS+ EM MI + + + + Sbjct: 178 DKQLLRKLGNNLFEADAG--AQQIPFSGRILQGYLEGSNVNSVQEMVDMISVLRAYEANQ 235 Query: 225 TLIDENEKSMLEAIRNIA 242 ++++ +A+ IA Sbjct: 236 KAFTIQDETLQKAVNEIA 253 >gi|104782840|ref|YP_609338.1| flagellar basal body rod protein FlgG [Pseudomonas entomophila L48] gi|95111827|emb|CAK16551.1| Flagellar basal-body rod protein flgG [Pseudomonas entomophila L48] Length = 261 Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats. Identities = 48/261 (18%), Positives = 95/261 (36%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + L+ +++N++N T GF+ + +F +++ IK Sbjct: 1 MLPALWVAKTGLSAQDTNLTVISNNLANVSTTGFKRDRAEFQDLLYQIKRQPGAQSTQDS 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 Q + V + + G +T LD A+ G +F + P G + TRDG F Sbjct: 61 ELPSGLQVGTGVRVVGTQKNFQTGGLQNTENPLDMAINGRGFFQILQPDGTVSYTRDGTF 120 Query: 107 KVTDDGSLVSASGKYPVLD-MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 + DG +V+A G + Q + V + +VI + Sbjct: 121 HLNSDGQIVNADGFALEPAIVVPPEAQTFTVGQDGTVSITTAGNPAAQVIGNLQTADFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G N+ + T + LE+SN +++ E+ MI + + Sbjct: 181 PAGLQAIGNNLFLETAASGAPQIGTPGLNGFGTSLQKTLENSNVSTVEELVNMITTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + +I +K + + + Sbjct: 241 EMNSKVISAADKMLSFVTQQL 261 >gi|331007439|ref|ZP_08330616.1| Flagellar basal-body rod protein flgG [gamma proteobacterium IMCC1989] gi|330418746|gb|EGG93235.1| Flagellar basal-body rod protein flgG [gamma proteobacterium IMCC1989] Length = 261 Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats. Identities = 42/261 (16%), Positives = 98/261 (37%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A +++L+++++N++N T+GF+ +V F +++ I+ Sbjct: 1 MNPALYVSKTGLSAQDRQLTSISNNLANASTIGFKRDRVNFEDLLYQIQRQPGGQSSQNT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V GS T LD A+ +F ++ P TR+G+F Sbjct: 61 QLPSGLQLGTGVRVVATQKQFTGGSLQVTEQPLDLAINNRGFFQIQMPSGETAYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 + +G +V+ASG ++ + V + + + + Sbjct: 121 HLNSNGDIVNASGFLLEPSISIPENTNNITISQDGIVSASILGEATPQELGQITITDFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + ++ +G LE+SN + + EM MI + + Sbjct: 181 PAGLQALGGNVFAQTAASGDPQTGTAGESGLGSIIQGSLENSNVDIVEEMVNMITTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + ++ ++ + +N+ Sbjct: 241 EMNSKVVSTADQMLQFISQNL 261 >gi|183598619|ref|ZP_02960112.1| hypothetical protein PROSTU_02019 [Providencia stuartii ATCC 25827] gi|188020798|gb|EDU58838.1| hypothetical protein PROSTU_02019 [Providencia stuartii ATCC 25827] Length = 260 Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 84/259 (32%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I + L +++N++N T GF+ + F +++ Sbjct: 1 MIRSLWIAKTGLDTQQTNLDVISNNLANVSTNGFKRQRAVFEDLLYQNIRQPGAMSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + G+ TG D A++G + ++ P G TRDG Sbjct: 61 SLPSGLQLGTGSRPVATMRIHSQGALNKTGNTTDIAIKGQGFLHVQLPDGTDAYTRDGAL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 + DG LV++SG V + V + + I + L + Sbjct: 121 QPNQDGQLVTSSGYQIVPAITIPDNANSLTIARDGTVSITVYGDNQPQQIGQITLTTFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + T + + LE SN N E+ MI + + Sbjct: 181 DAGLESMGENLYMETASSGAPNESAPGTNGAGLLYQHMLETSNVNVAEELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + Sbjct: 241 EINSKAVSASDQMLQRLTQ 259 >gi|261341492|ref|ZP_05969350.1| flagellar basal-body rod protein FlgG [Enterobacter cancerogenus ATCC 35316] gi|288316288|gb|EFC55226.1| flagellar basal-body rod protein FlgG [Enterobacter cancerogenus ATCC 35316] Length = 261 Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 92/261 (35%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + I A + ++S +++N++N +T GF+ +V F+++ + Sbjct: 1 MNPALWISKTGLAAQDAKMSAISNNLANVNTTGFKRDRVMFADLFYQNQRTPGGQLDQNN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRF 106 Q + V G+ +TG +LD A+ G +F S I TR G F Sbjct: 61 TSPTGIQFGTGVKILGTQKEFSTGNIQNTGQKLDVAITGQGFFQVETSDGDIAYTRAGNF 120 Query: 107 KVTDDGSLVSASGKY-PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 + DG L +A G ++ Q + V + + L + Sbjct: 121 QKNPDGMLTNAQGLPLVPQIELPDNVKDIQIGKDGTVTATVAGETDPVELGQITLVNFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + +++G LE SN + EM MI + + + Sbjct: 181 PAGLEAIGGNLYRETAASGEAVEGVAGEEAFGQLEQGSLEGSNVQVVEEMVDMITVQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 ++ + + +++ Sbjct: 241 EMNAKMVSAADDMLKFVTQSM 261 >gi|153952075|ref|YP_001398357.1| flagellar basal body rod protein FlgG [Campylobacter jejuni subsp. doylei 269.97] gi|152939521|gb|ABS44262.1| flagellar basal-body rod protein FlgG [Campylobacter jejuni subsp. doylei 269.97] Length = 263 Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats. Identities = 39/262 (14%), Positives = 96/262 (36%), Gaps = 22/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S + +A + ++ ++N++N +T GF+ + +F++++ + Sbjct: 1 MMRSLHTAATGMVAQQMQIDVTSNNIANVNTAGFKKSRAEFADLMYQVMKYAGTSTSATT 60 Query: 56 ---------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGR 105 + + + + ++ LD A+ G+ +F ++ P G I TR+G+ Sbjct: 61 LSPSGIEVGVGVRPTAVTKVFTKGNLKSTSTDGLDMAIAGNGFFQIQLPDGTIGYTRNGQ 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVD 164 F ++G++V++ G + +M Q+ I + L Sbjct: 121 FTKDNEGNIVNSDGYRLLPEMTIPEGATAINVATDGTVSVMLPGEQQETQIGQVELVQFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G ++ T++ GF+E SN + EM +I + Sbjct: 181 NPAGLHSMGDNLYLETGASGAPVAGIAGQDGLGTIRHGFIELSNVQLVEEMTDLITGQRA 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + + I ++ + + + Sbjct: 241 YEAGSKAITTSDDMLG-IVNQL 261 >gi|124268252|ref|YP_001022256.1| flagellar basal body and hook protein [Methylibium petroleiphilum PM1] gi|124261027|gb|ABM96021.1| flagellar basal body and hook protein [Methylibium petroleiphilum PM1] Length = 260 Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 88/259 (33%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + +L ++ N++N+ T G++ F +++ Sbjct: 1 MMRSLWISKTGMEAQQTQLDHISHNLANSATNGYKRSHAVFEDLMYQTIRQPGANSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 Q + GS + LD A++G +F ++ P G TRDG F Sbjct: 61 QLPTGLQLGLGTRAVATSRQFSQGSLQQSTNPLDLAVKGQGFFQIQLPDGTTGYTRDGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165 +V+ G LV+ +G + + + + L S Sbjct: 121 QVSAQGQLVTNNGYVVQPGITIPANAQNVTIGADGNVSVTLPGQAAAQTVGQIQLASFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G R + + + + +GF+E SN N + E+ MI + + Sbjct: 181 PAGLEPRGENLYTETAASGTPNAGAPDSNGLGAIAQGFVEGSNVNVVEELVAMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + I +++ + + + Sbjct: 241 ELNSKAIQTSDQMLQKLAQ 259 >gi|83312594|ref|YP_422858.1| flagellar basal body rod protein FlgG [Magnetospirillum magneticum AMB-1] gi|82947435|dbj|BAE52299.1| Flagellar basal body rod protein [Magnetospirillum magneticum AMB-1] Length = 261 Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats. Identities = 50/261 (19%), Positives = 104/261 (39%), Gaps = 22/261 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 S NI LA + + +++N++N +T F + +F++++ + Sbjct: 1 MRSLNIAATGMLAQQTNVEVISNNIANMNTTAFTRRRPEFADLLYQNLRRVGSQSSDTGT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q V + Y E GS ST LD A++G +F ++ P TRDG F Sbjct: 61 IVPTGVQLGLGVKTTAVYRITEQGSVQSTDNTLDMAIQGKGYFQIKLPSGETAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 +++ +G++V+ G + + + + V K + + ++ + L + Sbjct: 121 QLSPEGTIVTHEGYQVIPQVTIPSDAVGVTVDSTGQVIVKQDGQVQSQIKGQLTLATFAN 180 Query: 166 SQGFVRRENSG-ISPNIPPTP----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G R + + P T+ +GFLE SN N + E+ +I + + Sbjct: 181 DAGLEARGGNLFMETPASGQPVVQTPGKPGFGTILQGFLETSNVNVVAEVTNLIGAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + +I +++ + I + Sbjct: 241 EMNSKVIQASDEML-STINQM 260 >gi|28900124|ref|NP_799779.1| putative flagellar basal-body rod protein [Vibrio parahaemolyticus RIMD 2210633] gi|260365774|ref|ZP_05778270.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus K5030] gi|260880696|ref|ZP_05893051.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus AN-5034] gi|260897698|ref|ZP_05906194.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus Peru-466] gi|260899391|ref|ZP_05907786.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus AQ4037] gi|28808407|dbj|BAC61612.1| putative flagellar basal-body rod protein [Vibrio parahaemolyticus RIMD 2210633] gi|308086222|gb|EFO35917.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus Peru-466] gi|308092230|gb|EFO41925.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus AN-5034] gi|308109302|gb|EFO46842.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus AQ4037] gi|308115005|gb|EFO52545.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus K5030] gi|328470103|gb|EGF41014.1| flagellar basal body rod protein FlgG [Vibrio parahaemolyticus 10329] Length = 261 Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats. Identities = 44/255 (17%), Positives = 95/255 (37%), Gaps = 20/255 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M ++ + A + +++ +++N++N +TVGF+ +V F ++ +I+ Sbjct: 1 MHSALWVSKTGMAAQDTKMTAISNNLANVNTVGFKRDRVVFEDLFYSIQRQPGAQVDQVN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106 Q S V G+ +T +LD A+ G +F +E+ I+ TR+G+F Sbjct: 61 ELPSGVQLGSGVRVVGTQKVFTQGNTQNTTQDLDLAVMGQGFFQIENSDGQIMYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQI-PQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 + +G +V++ G + V + + + L Sbjct: 121 HINSEGLMVNSQGLPLEPQIQIPDNATSFSVGVDGTVTTTTADDPTPQQLGQITLAKFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + P ++ ++K+G LE SN + EM MI + + Sbjct: 181 PAGLEAVGGNLFRETEASGPADELIAGADGAGSIKQGALEGSNVQVVEEMVDMITTQRAY 240 Query: 221 NSITTLIDENEKSML 235 ++ + + Sbjct: 241 EMNAKVVSAADDMLK 255 >gi|103488389|ref|YP_617950.1| flagellar basal body rod protein FlgG [Sphingopyxis alaskensis RB2256] gi|98978466|gb|ABF54617.1| Flagellar basal-body rod FlgG [Sphingopyxis alaskensis RB2256] Length = 261 Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats. Identities = 46/257 (17%), Positives = 88/257 (34%), Gaps = 19/257 (7%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK-------- 55 + ++ A R+ +A+N++N +T GF+ + F + + Sbjct: 5 ALHVARTGLDAQSFRMQVIANNLANVNTTGFKRDRASFETLSYQLMTQAGAPSTAENRYA 64 Query: 56 -----ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVT 109 + VA G+F +TG LD A++G +F +E P I TR G F Sbjct: 65 TGLNLGTGVALNGTARIDTQGTFQTTGNGLDVAIDGAGYFQVELPDGRIGYTRAGNFGRA 124 Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169 DG++V+ GK + + + + + G Sbjct: 125 PDGTIVTPDGKPLTPAIQIPEDAGNVSIGLDGTVSATAADGTALELGRIEIARFSNPAGL 184 Query: 170 VRRENSGISPNIPPTPLEDLS-----GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224 + + T++ G LE SN N + E+ MI + + + Sbjct: 185 QAIGGNMLVETQASGAPLVGGAGEEGRGTLRGGMLEGSNVNVVEELVDMIETQRAYEVNS 244 Query: 225 TLIDENEKSMLEAIRNI 241 +I ++ M A + + Sbjct: 245 KMISATDEMMKNASQTL 261 >gi|283953936|ref|ZP_06371465.1| flagellar basal-body rod protein [Campylobacter jejuni subsp. jejuni 414] gi|283794541|gb|EFC33281.1| flagellar basal-body rod protein [Campylobacter jejuni subsp. jejuni 414] Length = 262 Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats. Identities = 40/261 (15%), Positives = 96/261 (36%), Gaps = 22/261 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55 S + +A + ++ ++N++N +T GF+ + +F++++ + Sbjct: 1 MRSLHTAATGMVAQQTQIDVTSNNIANVNTAGFKKSRAEFADLMYQVMKYAGTSTSATTL 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 + + + E ++ LD A+ G+ +F ++ P G I TR+G+F Sbjct: 61 SPSGIEVGVGVRPTAVTKVFTEGNLKSTSTDGLDMAIAGNGFFQIQLPDGTIGYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165 ++G++V++ G + +M I Q+ I + L Sbjct: 121 TKDNEGNIVNSDGYRLLPEMTIPEGAIAINVATDGTVSVMLPGEQQETQIGQVELVQFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ T++ GF+E SN + EM +I + + Sbjct: 181 PAGLHSMGDNLYLETGASGAPVAGIAGQDGLGTIRHGFIELSNVQLVEEMTDLITGQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + + I ++ + + + Sbjct: 241 EAGSKAITTSDDMLG-IVNQL 260 >gi|52785608|ref|YP_091437.1| flagellar basal body rod protein FlgG [Bacillus licheniformis ATCC 14580] gi|163119437|ref|YP_079022.2| flagellar basal body rod protein FlgG [Bacillus licheniformis ATCC 14580] gi|319645990|ref|ZP_08000220.1| FlgE protein [Bacillus sp. BT1B_CT2] gi|52348110|gb|AAU40744.1| FlgE [Bacillus licheniformis ATCC 14580] gi|145902944|gb|AAU23384.2| flagellar hook protein [Bacillus licheniformis ATCC 14580] gi|317391740|gb|EFV72537.1| FlgE protein [Bacillus sp. BT1B_CT2] Length = 263 Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 46/260 (17%), Positives = 96/260 (36%), Gaps = 21/260 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--------- 51 M S G++ + +L VA+N+SN +T G++ +V F ++V + Sbjct: 1 MLRSLYSGISGMKNFQTKLDVVANNISNINTAGYKKSRVTFKDIVSQQLSGASSSTANRG 60 Query: 52 ---IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 Q G + + +TG +LD + GD +F + S + TR G F Sbjct: 61 SVNGQQVGLGATIGSIDIIHTNAAPSTTGRQLDMTITGDGYFRVGSGDEVYYTRSGNFYR 120 Query: 109 TDDGSLVSASGKYPVLDMAS----VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 +D+G LV+ G + + + + + + + L + Sbjct: 121 SDEGDLVTVDGLFVLTANNGRINIPQDAQSFSIAPDGTVSYVDQNNENQTAGQISLATFS 180 Query: 165 MSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 + G + ++ + + + ++ LE SN + E +MI + Sbjct: 181 NTSGLSKAGDNLYRETLSSGDPQVVVPGEGGSGKIQTSALEMSNVDLSEEFSEMIIAQRG 240 Query: 220 FNSITTLIDENEKSMLEAIR 239 F S +I +++ + E + Sbjct: 241 FQSNAKIITTSDEILQELVN 260 >gi|319649558|ref|ZP_08003714.1| flagellar hook protein [Bacillus sp. 2_A_57_CT2] gi|317398720|gb|EFV79402.1| flagellar hook protein [Bacillus sp. 2_A_57_CT2] Length = 268 Score = 165 bits (417), Expect = 5e-39, Method: Composition-based stats. Identities = 46/265 (17%), Positives = 93/265 (35%), Gaps = 26/265 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ + +L + +N++N +T G++ +V F ++V + Sbjct: 1 MLRSMYSGISGMKNFQTKLDVIGNNIANVNTFGYKKGRVNFKDMVSQTISGATGSGENSG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 Q GS +TG LD ++GD + ++ TR G + Sbjct: 61 GINPKQVGLGSQLSSIDTIDTQGSLQTTGRVLDIGIQGDGYLMVQRGNNTYYTRAGNLYL 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI---------ATMG 159 DD +LV+ASG + + +I +G Sbjct: 121 DDDANLVTASGDKIKGADGAAIQLNGGDATVIKSLSISNDGTINFLIDGNDTLQAAGPIG 180 Query: 160 LYSVDMSQGFVRRENSGISPNIP-----PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMI 214 + + + G + ++ + P + + G LE SN + E +MI Sbjct: 181 IARFNNNGGLEKIGDNLYKDTVNSGDAVPLTPGEDGAGILVSGTLEMSNVDLSEEFTEMI 240 Query: 215 HLTQKFNSITTLIDENEKSMLEAIR 239 + F + T +I +++ + E + Sbjct: 241 TAQRGFQANTRIITTSDEILQELVN 265 >gi|91224197|ref|ZP_01259460.1| putative flagellar basal-body rod protein [Vibrio alginolyticus 12G01] gi|269965646|ref|ZP_06179759.1| Putative flagellar basal-body rod protein flgG [Vibrio alginolyticus 40B] gi|91191108|gb|EAS77374.1| putative flagellar basal-body rod protein [Vibrio alginolyticus 12G01] gi|269829714|gb|EEZ83950.1| Putative flagellar basal-body rod protein flgG [Vibrio alginolyticus 40B] Length = 261 Score = 165 bits (417), Expect = 5e-39, Method: Composition-based stats. Identities = 45/255 (17%), Positives = 94/255 (36%), Gaps = 20/255 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M ++ + A + +++ +++N++N +TVGF+ +V F ++ +I+ Sbjct: 1 MHSALWVSKTGMAAQDTKMTAISNNLANVNTVGFKRDRVVFEDLFYSIQRQPGAQVDQVN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106 Q S V G+ +T ELD A+ G +F +E+ I+ TR+G+F Sbjct: 61 ELPSGIQLGSGVRVVGTQKVFTQGNTQNTTQELDLAVMGQGFFQIENSDGQIMYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQI-PQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 +G +V++ G + + V + + + L Sbjct: 121 HRNSEGLMVNSQGLPLEPQIQIPDNAVSFSVGVDGTVTTTTADDPTPQQLGQITLAKFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + P ++ +K+G LE SN + EM MI + + Sbjct: 181 PAGLEAMGGNLFRETEASGPADELIAGADGAGIIKQGALEGSNVQVVEEMVDMITTQRAY 240 Query: 221 NSITTLIDENEKSML 235 ++ + + Sbjct: 241 EMNAKVVSAADDMLK 255 >gi|149191155|ref|ZP_01869413.1| putative flagellar basal-body rod protein [Vibrio shilonii AK1] gi|148834993|gb|EDL51972.1| putative flagellar basal-body rod protein [Vibrio shilonii AK1] Length = 261 Score = 165 bits (417), Expect = 5e-39, Method: Composition-based stats. Identities = 41/260 (15%), Positives = 96/260 (36%), Gaps = 20/260 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M ++ I A + +++ +++N++N +TVGF+ +V F ++ ++ + Sbjct: 1 MHSALWISKTGMAAQDAKMTAISNNLANINTVGFKRDRVVFEDLFYSVDKQAGTETTELN 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 + V G+ +T + D A+ GD +F +E+ G + TR+G+F Sbjct: 61 EHPTGIQLGNGVRVVGTEKVFTQGNVQNTNQQFDLAILGDGFFQIENSDGELLYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLD-MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 + DG LV+ G + + + + + + + + Sbjct: 121 QTNSDGQLVNTQGYPLIPEIVIPPEATLVSITADGVATATIPGQVNPEALGQITIVKFMN 180 Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + +K+G LE SN + EM MI + + Sbjct: 181 PAGLAAQGGNLFAETEGSGEAVELVAGTEGSGQLKQGALEGSNVQVVEEMVDMIATQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRN 240 ++ ++ + + Sbjct: 241 EMSAKMVSAADEMLQYIAQQ 260 >gi|330875986|gb|EGH10135.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330967093|gb|EGH67353.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv. actinidiae str. M302091] Length = 262 Score = 165 bits (417), Expect = 5e-39, Method: Composition-based stats. Identities = 45/262 (17%), Positives = 96/262 (36%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + L+T+++N++N T GF++ + +F +++ IK Sbjct: 1 MLPALYVAKTGLAAQDTNLTTISNNLANVSTTGFKSDRAEFQDLLYQIKRQPGAQSTQDS 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V + GS +T LD A+ G +F + P I +RDG F Sbjct: 61 ELPSGLQLGTGVRIVGTQKNFTAGSLQTTNNPLDLAVNGRGFFQVTQPDGTIAYSRDGTF 120 Query: 107 KVTDDGSLVSASGK--YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 + G +V+A+G P + + + + +VI + Sbjct: 121 HLNSTGQIVTATGYALEPAIVVPQNAQTFTVGQDGTVSVTLAGATATSQVIGNIQTADFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQK 219 G + + + + LE+SN +++ E+ MI + Sbjct: 181 NPAGLQAIGGNLYLETASSGAPQIGTPGLNGLGPTLQNTLENSNVSTVEELVNMITTQRA 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I ++ + +N+ Sbjct: 241 YEMNSKVISTADQMLQNLTQNL 262 >gi|206558970|ref|YP_002229730.1| flagellar basal body rod protein FlgG [Burkholderia cenocepacia J2315] gi|198035007|emb|CAR50879.1| flagellar basal-body rod protein FlgG (distal rod protein) [Burkholderia cenocepacia J2315] Length = 262 Score = 165 bits (417), Expect = 5e-39, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 89/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + ++ +++N++NT T GF+ + F +++ Sbjct: 1 MNRSLYIAATGMNAQQAQMDVISNNLANTSTNGFKASRAVFEDLLYQTIRQPGANSTQQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V G TG D A+ G +F + P G TRDG F Sbjct: 61 ELPSGLQLGTGVQQVATERLYTQGGLTQTGNSKDVAINGAGFFQVLMPDGTNAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 + G LV++SG + + + V S I ++ + + Sbjct: 121 QTNAQGQLVTSSGYQVLPAITVPQNAQSLTIGKDGVVSVTQPGSSNAVQIGSLQIATFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + +G++E SN N + E+ MI + + Sbjct: 181 PAGLEAKGENLFAETTSSGAPNVSQPGLNGAGVLNQGYVEASNVNVVQELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + Sbjct: 241 EINSKAVTTSDQMLQTVTQ 259 >gi|57167709|ref|ZP_00366849.1| flagellar basal-body rod protein (flgG) [Campylobacter coli RM2228] gi|305433215|ref|ZP_07402371.1| flagellar basal-body rod protein FlgG [Campylobacter coli JV20] gi|57020831|gb|EAL57495.1| flagellar basal-body rod protein (flgG) [Campylobacter coli RM2228] gi|304443916|gb|EFM36573.1| flagellar basal-body rod protein FlgG [Campylobacter coli JV20] Length = 263 Score = 165 bits (417), Expect = 5e-39, Method: Composition-based stats. Identities = 41/262 (15%), Positives = 95/262 (36%), Gaps = 22/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS--- 57 M S + +A + ++ ++N++N +T GF+ + +F++++ + S Sbjct: 1 MMRSLHTAATGMVAQQTQIDVTSNNIANVNTAGFKKGRAEFADLMYQVMKYAGTSTSATT 60 Query: 58 -----------FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGR 105 + + E ++ LD A+ G+ +F ++ P I TR+G+ Sbjct: 61 LSPSGIEVGIGVRPTAVTKVFTEGNLKATSTDSLDMAIAGNGFFQIQLPDGTIAYTRNGQ 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVD 164 F ++G++V+A G + +M Q+ I + L Sbjct: 121 FTKDNEGNIVNADGYRLLPEMTIPEGATAINVATDGTVSVMLPGEQQETQIGQVELVQFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G ++ T++ GF+E SN + EM +I + Sbjct: 181 NPAGLHSMGDNLYLETGASGAPVAGIATQDGLGTIRHGFIELSNVQLVEEMTDLITGQRA 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + + I ++ + + + Sbjct: 241 YEAGSKAITTSDDMLG-IVNQL 261 >gi|109899400|ref|YP_662655.1| flagellar basal body rod protein FlgG [Pseudoalteromonas atlantica T6c] gi|109701681|gb|ABG41601.1| flagellar basal-body rod protein FlgG [Pseudoalteromonas atlantica T6c] Length = 262 Score = 165 bits (417), Expect = 5e-39, Method: Composition-based stats. Identities = 45/262 (17%), Positives = 97/262 (37%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + I A + ++ +++N++N TVGF+ + F +++ N + Sbjct: 1 MHPALWISKTGLDAAQTDVAVISNNLANASTVGFKKDRAIFEDLLYQNINQPGGRSSADT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + + G+ ++T LD +++G +F ++ P I TR+G+F Sbjct: 61 ELPSGLMLGAGSKVVATQKAHTQGNMLTTENALDMSIQGRGFFEIQQPDGSIAYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI--SQKGKVIATMGLYSVD 164 + D+G +V+ + + +VP Q + I +V+ + L Sbjct: 121 TLNDEGQIVTPGAGFLLQPNITVPEDAQQITISQDGEVSASIRGQADPQVLGQISLSDFV 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + TV +G LE SN N E+ +I + Sbjct: 181 NMTGLQPIGQNLYVETATSGAPIQGVPGLEGLGTVVQGALETSNVNVTEELVNLIESQRL 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I + + + I+ + Sbjct: 241 YEMNSKVISAVDSMLGQVIQQL 262 >gi|15964409|ref|NP_384762.1| flagellar basal body rod protein FlgF [Sinorhizobium meliloti 1021] gi|307311551|ref|ZP_07591192.1| flagellar basal-body rod protein FlgF [Sinorhizobium meliloti BL225C] gi|17380373|sp|O54248|FLGF_RHIME RecName: Full=Flagellar basal-body rod protein flgF gi|15073586|emb|CAC45228.1| Flagellar basal-body rod protein [Sinorhizobium meliloti 1021] gi|306899568|gb|EFN30197.1| flagellar basal-body rod protein FlgF [Sinorhizobium meliloti BL225C] Length = 241 Score = 165 bits (417), Expect = 5e-39, Method: Composition-based stats. Identities = 109/242 (45%), Positives = 164/242 (67%), Gaps = 4/242 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 MQT + L++Q+ALE+RL+T+ADN++N++TVGFR +VKF++V+G K K+S+V+ Sbjct: 1 MQTGLYVALSSQMALEKRLNTLADNIANSNTVGFRATEVKFNQVLGDTK---PTKVSYVS 57 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 G+E+LS + G+ TG+ LDFA++GDAWF++++P G LTRDGRF +T+ G LV+ G Sbjct: 58 EGEEFLSTKTGALARTGSALDFAIKGDAWFSIDTPGGPALTRDGRFTLTETGELVTIKGY 117 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 PVLD PIQ+ VG G I Q G IA +GLY D S+GF+R +NS + P Sbjct: 118 -PVLDAGGAPIQLNGGAGEIAVGADGAIHQNGVQIALLGLYEADFSKGFMRYDNSSVMPA 176 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 P P+ D V V +GFLE+SN N++ EM Q+I +T+ F+++T L+ ++E S+ +AI Sbjct: 177 AQPEPVVDRFDVGVMQGFLEESNVNAIQEMSQLIMITRAFDNVTALMRDSEGSLDKAIET 236 Query: 241 IA 242 + Sbjct: 237 LG 238 >gi|288962677|ref|YP_003452971.1| flagellar basal-body rod protein [Azospirillum sp. B510] gi|288914943|dbj|BAI76427.1| flagellar basal-body rod protein [Azospirillum sp. B510] Length = 243 Score = 165 bits (417), Expect = 5e-39, Method: Composition-based stats. Identities = 72/242 (29%), Positives = 121/242 (50%), Gaps = 2/242 (0%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M+ IGL+ Q+AL ++L VA+N++N +T GFR + F + A +I+F Sbjct: 1 MENQLYIGLSRQMALRRQLDVVANNVANMNTAGFRGERTLFEAAMEAGGRKPTDRIAFTI 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 Y G+ TG D AL+GD + A+++P G+ TRDGR + DG+LV +G Sbjct: 61 DRATYTDLRPGALTETGNPYDVALDGDGFLAVQTPDGVRYTRDGRLRRDADGTLVGPNGY 120 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 PVLD PI IP + ++G G +S G V++ + ++ D Q + + P Sbjct: 121 -PVLDDGRRPIVIPSESSKISIGSDGLLSADGTVVSRIAVFRFDTPQALKQTGDLLFDPP 179 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 P + G E SN + E+G+M+ LT+ + ++T ++D+ + + AI Sbjct: 180 AGLEPRP-APDTRLVEGKTERSNVQGIVEIGRMMDLTRDYQAVTRMVDDGQDLLRSAINR 238 Query: 241 IA 242 + Sbjct: 239 LG 240 >gi|154174905|ref|YP_001408076.1| flagellar basal body rod protein FlgG [Campylobacter curvus 525.92] gi|112802860|gb|EAU00204.1| flagellar basal-body rod protein FlgG [Campylobacter curvus 525.92] Length = 262 Score = 165 bits (417), Expect = 5e-39, Method: Composition-based stats. Identities = 40/261 (15%), Positives = 91/261 (34%), Gaps = 21/261 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ------ 54 M S +A + ++ ++N++N +T G++ + +F++++ + Sbjct: 1 MMRSLYTAATGMIAQQTQIDVTSNNIANVNTYGYKKNRAEFADLMYQVMEYAGTATSQTT 60 Query: 55 -------KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 V G F T LD + G+ +F L+ P TR+G F Sbjct: 61 TSPTGIEVGLGVRPTAINKIFSQGYFKETSNNLDMVIAGNGFFQLQLPDGTTAYTRNGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 K+ +G++V++ G + + V I + + + Sbjct: 121 KLDSNGTIVNSDGYQLIPQIVVPANATQISIGTDGTVSVLQAGETNMAQIGQIQIANFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ T+++GF+E SN + EM +I + + Sbjct: 181 PAGLHSMGDNNYLETAASGDAVVGVAGLDGLGTIRQGFVEMSNVQLVEEMTDLITGQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + + I ++ + E + + Sbjct: 241 EANSKAITTSDSML-EIVNGL 260 >gi|332305617|ref|YP_004433468.1| flagellar basal-body rod protein FlgG [Glaciecola agarilytica 4H-3-7+YE-5] gi|332172946|gb|AEE22200.1| flagellar basal-body rod protein FlgG [Glaciecola agarilytica 4H-3-7+YE-5] Length = 262 Score = 165 bits (417), Expect = 5e-39, Method: Composition-based stats. Identities = 45/262 (17%), Positives = 97/262 (37%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + I A + ++ +++N++N TVGF+ + F +++ N + Sbjct: 1 MHPALWISKTGLDAAQTDVAVISNNLANASTVGFKKDRAIFEDLLYQNINQPGGRSSADT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + + G+ ++T LD +++G +F ++ P I TR+G+F Sbjct: 61 ELPSGLMLGAGSKVVATQKAHTQGNMLTTENALDMSIQGRGFFEIQQPDGTIAYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI--SQKGKVIATMGLYSVD 164 + D+G +V+ + + +VP Q + I +V+ + L Sbjct: 121 TLNDEGQIVTPGAGFLLQPNITVPEDAQQITISQDGEVSASIRGQADPQVLGQISLSDFV 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + TV +G LE SN N E+ +I + Sbjct: 181 NMTGLQPIGQNLYVETATSGAPIQGVPGLEGLGTVVQGALETSNVNVTEELVNLIESQRL 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I + + + I+ + Sbjct: 241 YEMNSKVISAVDSMLGQVIQQL 262 >gi|313141242|ref|ZP_07803435.1| flagellar basal-body rod protein distal rod protein [Helicobacter canadensis MIT 98-5491] gi|313130273|gb|EFR47890.1| flagellar basal-body rod protein distal rod protein [Helicobacter canadensis MIT 98-5491] Length = 262 Score = 165 bits (417), Expect = 5e-39, Method: Composition-based stats. Identities = 46/261 (17%), Positives = 100/261 (38%), Gaps = 23/261 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55 + L + ++ ++N+SN +T G+R + +F+++ + Sbjct: 1 MRALYTATTGMLGQQLQIDVTSNNISNVNTFGYRKERAEFADLFHQVLQYAGSSTSETTL 60 Query: 56 -------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFK 107 V G+F T LD A+ G+ +F +E P I TRDG FK Sbjct: 61 SPTGIEVGLGVRPTSVQKIFSQGNFKETENNLDIAITGNGFFQIELPDGTIAYTRDGSFK 120 Query: 108 VTDDGSLVSASGK--YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 + D+G++V++ G P + + QI + +G ++ + + + + Sbjct: 121 LDDEGNVVNSQGYLLVPNITIPDDATQINIGTDGTVSVVQGNETEVNE-LGQIETVNFIN 179 Query: 166 SQGFVRRENSGI-SPNIPPTP----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ + N P +++GF+E SN + EM +I + + Sbjct: 180 PAGLHALGDNLYLNTNASGDPIVGTPGLNGFGQLRQGFVETSNVKLVEEMTDLIVGQRAY 239 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + + I + + + + + Sbjct: 240 EANSKSIQTADSML-QIVNQL 259 >gi|313497764|gb|ADR59130.1| FlgG [Pseudomonas putida BIRD-1] Length = 261 Score = 165 bits (417), Expect = 5e-39, Method: Composition-based stats. Identities = 48/261 (18%), Positives = 97/261 (37%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + L+ +++N++N T GF+ + +F++++ IK Sbjct: 1 MLPALWVAKTGLSAQDTNLTVISNNLANVSTTGFKRDRAEFADLLYQIKRQPGAQSTQDS 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 Q + V S GS +T LD A+ G +F + P G + TRDG F Sbjct: 61 ELPSGLQVGTGVRIVGTQKSFVAGSLQTTENPLDMAVNGRGFFQVLQPDGTVSYTRDGTF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 + DG +V+A+G + Q + V + +VI + Sbjct: 121 HLNSDGQIVTANGYALEPAIVVPNDAQTFTVGQDGTVSITTAGNPAAQVIGNIQTADFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ + T + LE+SN +++ E+ MI + + Sbjct: 181 PAGLQAIGDNLFLETAASGAPQVGTPGLNGFGTTLQQTLENSNVSTVEELVNMITTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + +I ++ + + + Sbjct: 241 EMNSKVISTADQMLSFVTQQL 261 >gi|261419427|ref|YP_003253109.1| flagellar basal body rod protein FlgG [Geobacillus sp. Y412MC61] gi|319766242|ref|YP_004131743.1| flagellar hook-basal body protein [Geobacillus sp. Y412MC52] gi|261375884|gb|ACX78627.1| fagellar hook-basal body protein [Geobacillus sp. Y412MC61] gi|317111108|gb|ADU93600.1| flagellar hook-basal body protein [Geobacillus sp. Y412MC52] Length = 265 Score = 165 bits (417), Expect = 5e-39, Method: Composition-based stats. Identities = 54/263 (20%), Positives = 102/263 (38%), Gaps = 25/263 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G+ A + +L + +N++N +T GF+ + F +++ + Sbjct: 1 MLRSMYSGIGAMRNFQTKLDVIGNNIANVNTYGFKKGRTIFKDLMSQTISGASGPNAGRG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRF 106 Q GS +TG LD A+ GD +F S + TR G F Sbjct: 61 GTNPKQVGLGSQLAAIDTVHTQGSLQTTGRVLDLAISGDGFFVVGDASGNNRMYTRAGNF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG-----KVIATMGLY 161 + G +V+ G+Y L + + +Q+P + ++G G+++ I T+ L Sbjct: 121 YLDSQGYIVNVDGQYL-LGVGNSRLQVPTDAKSLSIGADGKVTIVDASGTLSTIGTIQLA 179 Query: 162 SVDMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHL 216 + G + N+ + T+ G LE SN + E +MI Sbjct: 180 KFANNDGLEKAGNNLFRETTNSGTPTTGAPGANGTGTIVSGALEMSNVDLAEEFTEMIVA 239 Query: 217 TQKFNSITTLIDENEKSMLEAIR 239 + F + T +I +++ + E + Sbjct: 240 QRGFQANTRIITTSDEILQELVN 262 >gi|74101660|gb|AAZ99750.1| FlgGL [Aeromonas hydrophila] Length = 275 Score = 165 bits (417), Expect = 5e-39, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 94/261 (36%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + +++++++N++N +TVGF+ +V F ++ ++ Sbjct: 15 MHAALWVSKTGLSAQDAKMASISNNLANVNTVGFKRDRVAFEDLFYQVQRQPGAQQDQQN 74 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G F +T ELD A+ G +F +E P TR+G++ Sbjct: 75 LSPIGIQMGNGVRVVGTQKVFTPGQFQNTNQELDMAVVGAGFFGVERPDGETAYTRNGQW 134 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165 +G LV++ G + + Q+ + + L + Sbjct: 135 HRNAEGLLVNSDGLPMLPQIQIPDNATKVSIGTDGTVSATLPGQQENVELGRITLTNFTN 194 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + +K+ LE SN N + EM MI + + Sbjct: 195 PAGLEALGGNLYRATGASGEAIEGVPGEEAMGAIKQFTLESSNVNVVEEMVDMITTQRAY 254 Query: 221 NSITTLIDENEKSMLEAIRNI 241 ++ ++ + + + Sbjct: 255 EMNAKVVSAADQMLKFVTQAL 275 >gi|116691038|ref|YP_836661.1| flagellar basal body rod protein FlgG [Burkholderia cenocepacia HI2424] gi|170734372|ref|YP_001766319.1| flagellar basal body rod protein FlgG [Burkholderia cenocepacia MC0-3] gi|254246967|ref|ZP_04940288.1| Flagellar basal body rod protein [Burkholderia cenocepacia PC184] gi|116649127|gb|ABK09768.1| flagellar basal-body rod protein FlgG [Burkholderia cenocepacia HI2424] gi|124871743|gb|EAY63459.1| Flagellar basal body rod protein [Burkholderia cenocepacia PC184] gi|169817614|gb|ACA92197.1| flagellar basal-body rod protein FlgG [Burkholderia cenocepacia MC0-3] Length = 262 Score = 165 bits (417), Expect = 5e-39, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 89/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + ++ +++N++NT T GF+ + F +++ Sbjct: 1 MNRSLYIAATGMNAQQAQMDVISNNLANTSTNGFKASRAVFEDLLYQTIRQPGANSTQQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V G TG D A+ G +F + P G TRDG F Sbjct: 61 ELPSGLQLGTGVQQVATERLYTQGGLTQTGNSKDVAINGAGFFQVLMPDGTNAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 + G LV++SG + + + V S I ++ + + Sbjct: 121 QTNAQGQLVTSSGYQVLPAITVPQNAQSLTIGKDGVVSVTQPGSSNAVQIGSLQIATFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + +G++E SN N + E+ MI + + Sbjct: 181 PTGLEAKGENLFAETTSSGAPNVSQPGLNGAGVLNQGYVEASNVNVVQELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + Sbjct: 241 EINSKAVTTSDQMLQTVTQ 259 >gi|78777301|ref|YP_393616.1| flagellar basal body rod protein FlgG [Sulfurimonas denitrificans DSM 1251] gi|78497841|gb|ABB44381.1| Flagellar basal-body rod FlgG [Sulfurimonas denitrificans DSM 1251] Length = 262 Score = 165 bits (417), Expect = 6e-39, Method: Composition-based stats. Identities = 48/259 (18%), Positives = 102/259 (39%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S + ++ +++T A+N++N +T+GF+ + +F++++ + + Sbjct: 1 MMQSLYTASTGMIGMQTQINTTANNIANVNTIGFKKSRAEFADLMYKVMDYAGTSTSDVT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 V GS T ELD A+ G +F LE P + +R+G F Sbjct: 61 KSPTGIEVGLGVRPTAINKVFSEGSLKQTDNELDVAVTGKGFFKLELPDGSEVYSRNGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 KV ++GS+V++ G V ++ P V + I M L + Sbjct: 121 KVDENGSIVNSDGYRLVPEVVIPPDATNINIGTDGTVSVVQAGQAQATQIGQMTLTNFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ + + +++GF+E SN + E+ +I + + Sbjct: 181 PAGLHSMGDNLYIETDSSGQPVEGTPGLDGLGVLRQGFVELSNVELVVELTDLITGQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 +S + +I +++ + Sbjct: 241 DSNSKVITTSDEMLQTTNN 259 >gi|332994160|gb|AEF04215.1| flagellar basal body rod protein FlgG [Alteromonas sp. SN2] Length = 262 Score = 165 bits (417), Expect = 6e-39, Method: Composition-based stats. Identities = 44/262 (16%), Positives = 97/262 (37%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + I A + ++ V++N++N TVGF+ + F +++ N + Sbjct: 1 MHPALWISKTGLDAAQTDVAVVSNNLANASTVGFKKDRAIFEDLLYQNINQPGGRSSADT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 S + G+ ++T LD +++G +F + P I +R+G+F Sbjct: 61 ELPSGLMLGSGSKVVSTQKAHTQGNLLTTDNALDMSIQGRGYFEILQPDGTIAYSRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEK--GEISQKGKVIATMGLYSVD 164 + D G +V++ + + ++P Q + + +V+ M L Sbjct: 121 SMNDQGQIVTSGAGFLLQPEVAIPEDAQQITISQDGEISVSIRGQAEPQVLGQMNLSDFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + T+ +G LE SN N E+ +I + Sbjct: 181 NPTGLQPIGQNLYVETASSGAPIQGVPGLQGIGTIAQGTLETSNVNVTEELVNLIESQRL 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I ++ + + I+ + Sbjct: 241 YEMNSKVISSVDQMLGQVIQQL 262 >gi|302390534|ref|YP_003826355.1| flagellar basal-body rod protein FlgF [Thermosediminibacter oceani DSM 16646] gi|302201162|gb|ADL08732.1| flagellar basal-body rod protein FlgF [Thermosediminibacter oceani DSM 16646] Length = 260 Score = 165 bits (416), Expect = 6e-39, Method: Composition-based stats. Identities = 51/265 (19%), Positives = 105/265 (39%), Gaps = 30/265 (11%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + LA R +++N++N +T GF+ + F + D Sbjct: 1 MIRGLYTSASGMLAEMARTDVISNNLANINTTGFKKDRAVFRAFPEMNIHRYDDPQPVGA 60 Query: 56 -------------ISFVASGKEYLSKEVGSFISTGTELDFALEG-----DAWFALESPRG 97 + + + G T LD A+E ++F +++P G Sbjct: 61 GFVIDPVPYIGVLGTGAGLDEIRVDFTQGRIEMTSNPLDLAIEDTAAGETSFFEIQTPAG 120 Query: 98 IILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157 I TRDG F + DG LV+ G Y + + + ++ K EI +GE+ G ++ Sbjct: 121 IRYTRDGSFTINADGFLVTREGYYVMGENGPINLRNGSKVEI---NTEGEVYLDGLMVDR 177 Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217 + + + ++ ++ P P + + +G LE +N N++ EM +I Sbjct: 178 LRIAAFPAGLSLEKQGDNLYRAQGVPLP----ANARIIQGALERANVNAVSEMVNLISAF 233 Query: 218 QKFNSITTLIDENEKSMLEAIRNIA 242 + + + ++ ++ ++ A+ IA Sbjct: 234 RAYEANQRMVRAHDDTLAGAVNEIA 258 >gi|239995123|ref|ZP_04715647.1| flagellar basal body rod protein FlgG [Alteromonas macleodii ATCC 27126] Length = 262 Score = 165 bits (416), Expect = 6e-39, Method: Composition-based stats. Identities = 41/262 (15%), Positives = 96/262 (36%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + I A + ++ V++N++N TVGF+ + F +++ N + Sbjct: 1 MHPALWISKTGLDAAQTDVAVVSNNLANASTVGFKKDRAVFEDLLYQNINQPGGRSSADT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 S + G+ ++T LD +++G +F + P I +R+G+F Sbjct: 61 ELPSGLMLGSGSKVVATQKAHTQGNLLTTENALDMSIQGRGYFEILQPDGTIAYSRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEK--GEISQKGKVIATMGLYSVD 164 + D G +V++ + + ++P Q + + +V+ + + Sbjct: 121 SLNDQGQIVTSGAGFLLQPEVAIPEDAQQITISQDGEISVSIRGQAEPQVLGQLNISDFV 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + + +G LE SN N E+ +I + Sbjct: 181 NPTGLQPTGQNLYVETASSGAPIQGIPGLQGLGYISQGTLETSNVNVTEELVNLIESQRL 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I ++ + + I+ + Sbjct: 241 YEMNSKVISSVDQMLGQVIQQL 262 >gi|254227985|ref|ZP_04921415.1| flagellar basal-body rod protein FlgG [Vibrio sp. Ex25] gi|151939481|gb|EDN58309.1| flagellar basal-body rod protein FlgG [Vibrio sp. Ex25] Length = 261 Score = 165 bits (416), Expect = 6e-39, Method: Composition-based stats. Identities = 46/255 (18%), Positives = 94/255 (36%), Gaps = 20/255 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M ++ + A + +++ +++N++N +TVGF+ +V F ++ +I+ Sbjct: 1 MHSALWVSKTGMAAQDTKMTAISNNLANVNTVGFKRDRVVFEDLFYSIQRQPGAQVDQVN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106 Q S V G+ +T ELD A+ G +F +E+ I+ TR+G+F Sbjct: 61 EVPSGIQLGSGVRVVGTQKVFTQGNTQNTTQELDLAVMGQGFFQIENSDGQIMYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 V +G +V++ G + V + + + L Sbjct: 121 HVNSEGLMVNSQGLPLEPQIQIPDNASSFSVGVDGTVTTTTADDPTPQQLGQITLAKFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + P + + +K+G LE SN + EM MI + + Sbjct: 181 PAGLEAVGGNLFRETEASGPADELIAGEDGAGLIKQGALEGSNVQVVEEMVDMITTQRAY 240 Query: 221 NSITTLIDENEKSML 235 ++ + + Sbjct: 241 EMNAKVVSAADDMLK 255 >gi|150395479|ref|YP_001325946.1| flagellar basal body rod protein FlgF [Sinorhizobium medicae WSM419] gi|150026994|gb|ABR59111.1| flagellar basal body rod protein [Sinorhizobium medicae WSM419] Length = 241 Score = 165 bits (416), Expect = 6e-39, Method: Composition-based stats. Identities = 107/242 (44%), Positives = 164/242 (67%), Gaps = 4/242 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 MQT + L++Q+ALE+RL+T+ADN++N++TVGFR +VKF++V+G K K+S+V+ Sbjct: 1 MQTGLYVALSSQMALEKRLNTLADNIANSNTVGFRATEVKFNQVLGDTK---PTKVSYVS 57 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 G+E+LS + G+ TG+ LDFA++GDAWF++++P G LTRDGRF +T+ G LV+ G Sbjct: 58 EGEEFLSTKTGALARTGSALDFAVKGDAWFSIDTPGGPALTRDGRFTLTEAGELVTIKGY 117 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 PVLD PIQ+ VG G I Q G +A +GL+ D S+GF+R +NS + P Sbjct: 118 -PVLDAGGAPIQLNGGAGEITVGADGAIHQNGVQVALLGLHEADFSKGFMRYDNSAVMPA 176 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 P P+ D V V +GFLE+SN N++ EM Q+I +T+ F+++T L+ ++E S+ +AI Sbjct: 177 AQPEPVVDRFDVGVMQGFLEESNVNAVQEMSQLIMITRAFDNVTALMRDSEGSIDKAIET 236 Query: 241 IA 242 + Sbjct: 237 LG 238 >gi|307318906|ref|ZP_07598337.1| flagellar basal-body rod protein FlgF [Sinorhizobium meliloti AK83] gi|306895320|gb|EFN26075.1| flagellar basal-body rod protein FlgF [Sinorhizobium meliloti AK83] Length = 241 Score = 165 bits (416), Expect = 6e-39, Method: Composition-based stats. Identities = 108/242 (44%), Positives = 163/242 (67%), Gaps = 4/242 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 MQT + L++Q+ALE+RL+T+ADN++N++TVGFR +VKF++V+G + K+S+V+ Sbjct: 1 MQTGLYVALSSQMALEKRLNTLADNIANSNTVGFRATEVKFNQVLGDTR---PTKVSYVS 57 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 G+E+LS + G+ TG+ LDFA++GDAWF++ +P G LTRDGRF +T+ G LV+ G Sbjct: 58 EGEEFLSTKTGALARTGSALDFAIKGDAWFSIGTPGGPALTRDGRFTLTETGELVTIKGY 117 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 PVLD PIQ+ VG G I Q G IA +GLY D S+GF+R +NS + P Sbjct: 118 -PVLDAGGAPIQLNGGAGEITVGADGAIHQNGVQIALLGLYEADFSKGFMRYDNSSVMPA 176 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 P P+ D V V +GFLE+SN N++ EM Q+I +T+ F+++T L+ ++E S+ +AI Sbjct: 177 AQPEPVVDRFDVGVMQGFLEESNVNAIQEMSQLIMITRAFDNVTALMRDSEGSLDKAIET 236 Query: 241 IA 242 + Sbjct: 237 LG 238 >gi|332140548|ref|YP_004426286.1| flagellar basal body rod protein FlgG [Alteromonas macleodii str. 'Deep ecotype'] gi|327550570|gb|AEA97288.1| flagellar basal body rod protein FlgG [Alteromonas macleodii str. 'Deep ecotype'] Length = 262 Score = 165 bits (416), Expect = 6e-39, Method: Composition-based stats. Identities = 41/262 (15%), Positives = 96/262 (36%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + I A + ++ V++N++N TVGF+ + F +++ N + Sbjct: 1 MHPALWISKTGLDAAQTDVAVVSNNLANASTVGFKKDRAVFEDLLYQNINQPGGRSSADT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 S + G+ ++T LD +++G +F + P I +R+G+F Sbjct: 61 ELPSGLMLGSGSKVVATQKAHTQGNLLTTENALDMSIQGRGYFEILQPDGTIAYSRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEK--GEISQKGKVIATMGLYSVD 164 + D G +V++ + + ++P Q + + +V+ + + Sbjct: 121 SLNDQGQIVTSGAGFLLQPEVAIPEDAQQITISQDGEISVSIRGQAEPQVLGQLNISDFV 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + + +G LE SN N E+ +I + Sbjct: 181 NPTGLQPTGQNLFVETASSGAPIQGIPGLQGLGYISQGTLETSNVNVTEELVNLIESQRL 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I ++ + + I+ + Sbjct: 241 YEMNSKVISSVDQMLGQVIQQL 262 >gi|38570330|gb|AAR24613.1| flagellar basal-body rod protein [Campylobacter jejuni subsp. jejuni] Length = 263 Score = 165 bits (416), Expect = 6e-39, Method: Composition-based stats. Identities = 40/262 (15%), Positives = 96/262 (36%), Gaps = 22/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S + +A + ++ ++N++N +T GF+ + +F++++ + Sbjct: 1 MMRSLHTAATGMVAQQTQIDVTSNNIANVNTAGFKESRAEFADLMYQVMKYAGTSTSATT 60 Query: 56 ---------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGR 105 + + + E ++ LD A+ G+ +F ++ P G I TR+G+ Sbjct: 61 LSPSGIEVGVGVRPTAVTKVFTEGNLKSTSTDGLDMAIAGNGFFQIQLPDGTIGYTRNGQ 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVD 164 F ++G++V++ G + +M Q+ I + L Sbjct: 121 FTKDNEGNIVNSDGYRLLPEMTIPEGATAINVATDGTVSVMLPGEQQETQIGQVELVQFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G ++ T++ GF+E SN + EM +I + Sbjct: 181 NPAGLHSMGDNLYLETGASGAPVAGIAGQDGLGTIRHGFIELSNVQLVEEMTDLITGQRA 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + + I ++ + + + Sbjct: 241 YEAGSKAITTSDDMLG-IVNQL 261 >gi|291334316|gb|ADD93977.1| flagellar basal body rod protein FlgG [uncultured marine bacterium MedDCM-OCT-S09-C247] Length = 257 Score = 165 bits (416), Expect = 6e-39, Method: Composition-based stats. Identities = 41/257 (15%), Positives = 88/257 (34%), Gaps = 20/257 (7%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--------- 55 ++ A + ++ +A+N++N +T GF+ + F + I + Sbjct: 1 MHVAKTGLNAQQYKMQVIANNLANVNTTGFKRDRANFESLFYQIVKTAGAQTADDTALTS 60 Query: 56 ----ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTD 110 + V G +ST LD A++G +F P + TR G Sbjct: 61 PLAVGTGVKVVSTQKLFTQGGLVSTDNSLDLAIDGQGFFQALLPDGRVGYTRSGILSRNA 120 Query: 111 DGSLVSASGKYPVLDMASVPIQIP-QKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169 +G L + SG + V + + + + + + +G Sbjct: 121 EGVLTTTSGYVLQPQIQLPADATSINVSTTGIVSVTEPGNDIAQEVGQISIANFSNPRGL 180 Query: 170 VRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224 + P+ ++ + V +G++E SN N + ++ MI + + + Sbjct: 181 TPIGENFFVPSAESGVAQEGAPLDGGFGKVLQGYVESSNVNVVQQLVDMIETQRAYEVSS 240 Query: 225 TLIDENEKSMLEAIRNI 241 I ++ M RN+ Sbjct: 241 KSITAVDEMMQFISRNL 257 >gi|222147571|ref|YP_002548528.1| flagellar basal-body rod protein [Agrobacterium vitis S4] gi|221734559|gb|ACM35522.1| flagellar basal-body rod protein [Agrobacterium vitis S4] Length = 263 Score = 165 bits (416), Expect = 6e-39, Method: Composition-based stats. Identities = 45/262 (17%), Positives = 92/262 (35%), Gaps = 22/262 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + I A + L +++N++N +T GF+ + +FS+++ + + Sbjct: 1 MRALAIASTGMNAQQTNLEVISNNIANINTTGFKKSRAEFSDLLYQTEKAVGVANRANQS 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR--GIILTRDGR 105 V + E G T ELD A+ G + ++SP TR G Sbjct: 61 TVPEGANIGLGVQTAAVRTMNEQGELSETSNELDVAIVGRGYLQVQSPDGATTFYTRAGA 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVD 164 DG+LV+ G + ++ K E V S + + + Sbjct: 121 LNKDSDGNLVTTEGYKIIPNITIPTDATEVKISESGEVSVLQGDSSTYTTLGQLETSAFV 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G ++ + +K+G+LE SN +S+ E+ +I + Sbjct: 181 NPAGLKAIGDNLFQETASSGNPINGVPGDAGYGYLKQGYLESSNVDSVTEITSLISAQRA 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I ++ +N+ Sbjct: 241 YEMNSKVITTADEMAQIVSKNL 262 >gi|115353116|ref|YP_774955.1| flagellar basal body rod protein FlgG [Burkholderia ambifaria AMMD] gi|170703098|ref|ZP_02893918.1| flagellar basal-body rod protein FlgG [Burkholderia ambifaria IOP40-10] gi|171321840|ref|ZP_02910741.1| flagellar basal-body rod protein FlgG [Burkholderia ambifaria MEX-5] gi|172061970|ref|YP_001809622.1| flagellar basal body rod protein FlgG [Burkholderia ambifaria MC40-6] gi|115283104|gb|ABI88621.1| flagellar basal-body rod protein FlgG [Burkholderia ambifaria AMMD] gi|170131995|gb|EDT00503.1| flagellar basal-body rod protein FlgG [Burkholderia ambifaria IOP40-10] gi|171092878|gb|EDT38130.1| flagellar basal-body rod protein FlgG [Burkholderia ambifaria MEX-5] gi|171994487|gb|ACB65406.1| flagellar basal-body rod protein FlgG [Burkholderia ambifaria MC40-6] Length = 262 Score = 165 bits (416), Expect = 6e-39, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 89/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + ++ +++N++NT T GF+ + F +++ Sbjct: 1 MNRSLYIAATGMNAQQAQMDVISNNLANTSTNGFKASRAVFEDLLYQTIRQPGANSTQQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V G TG D A+ G +F + P G TRDG F Sbjct: 61 ELPSGLQLGTGVQQVATERLYTQGGLTQTGNSKDVAINGAGFFQVLMPDGTNAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 + G LV++SG + + + V S I ++ + + Sbjct: 121 QTNAQGQLVTSSGYQILPAITVPQNAQSLTIGKDGVVSVTQPGSSNAVQIGSLQIATFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + +G++E SN N + E+ MI + + Sbjct: 181 PAGLEAKGENLFAETTSSGAPNVAQPGLNGAGVLNQGYVEASNVNVVQELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + Sbjct: 241 EINSKAVTTSDQMLQTVTQ 259 >gi|15616948|ref|NP_240161.1| flagellar basal body rod protein FlgG [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219681701|ref|YP_002468087.1| flagellar basal-body rod protein FlgG [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|219682256|ref|YP_002468640.1| flagellar basal-body rod protein FlgG [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|257471397|ref|ZP_05635396.1| flagellar basal body rod protein FlgG [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|11386809|sp|P57424|FLGG_BUCAI RecName: Full=Flagellar basal-body rod protein flgG; AltName: Full=Distal rod protein gi|25298916|pir||G84969 flagellar basal-body rod protein flgG [imported] - Buchnera sp. (strain APS) gi|10039013|dbj|BAB13047.1| flagellar basal-body rod protein flgG [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219621989|gb|ACL30145.1| flagellar basal-body rod protein FlgG [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219624544|gb|ACL30699.1| flagellar basal-body rod protein FlgG [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|311086079|gb|ADP66161.1| flagellar basal body rod protein FlgG [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311086651|gb|ADP66732.1| flagellar basal body rod protein FlgG [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] gi|311087237|gb|ADP67317.1| flagellar basal body rod protein FlgG [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] gi|311087756|gb|ADP67835.1| flagellar basal body rod protein FlgG [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 260 Score = 165 bits (416), Expect = 7e-39, Method: Composition-based stats. Identities = 42/259 (16%), Positives = 94/259 (36%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S I A + ++ +++N++N T GF+ + F +++ + Sbjct: 1 MIPSLWISKTGLDAQQINMNIISNNLANVSTNGFKRSRAVFEDLMYQTIREAGTNSSLET 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + V G+ T D A+ G +F ++ P I TRDG F Sbjct: 61 TLPSGLQLGTGVRPVSTERIHTQGNLSKTDASKDVAINGSGFFQVQLPDGNIAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 ++ +G LV+ SG + ++ + + + ++ + L + Sbjct: 121 QLDQNGQLVTNSGFPIIPEINIPSNSTNINIARDGVISVVVQGQTQPVLLGQLNLINFVN 180 Query: 166 SQGFVRRENSGISPN-IPPTPLED----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 + G + +P+E + +G++E SN N E+ MI + + Sbjct: 181 NSGLESLGENLYQETQASGSPIETTPGLNGTGVLYQGYVETSNVNVAEELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + I +++ + + + Sbjct: 241 EINSKSISTSDQMLQKLSQ 259 >gi|77359724|ref|YP_339299.1| flagellar basal body rod protein FlgG [Pseudoalteromonas haloplanktis TAC125] gi|76874635|emb|CAI85856.1| flagellar biosynthesis; cell-distal portion of basal-body rod [Pseudoalteromonas haloplanktis TAC125] Length = 262 Score = 165 bits (416), Expect = 7e-39, Method: Composition-based stats. Identities = 43/262 (16%), Positives = 93/262 (35%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + I A + +S +++N++N TVG++ + F +++ N + Sbjct: 1 MNPALWISKTGLDAQQTDISVISNNLANASTVGYKKSRAVFEDLLYQNINQPGGRSSQDT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + + G+ ++T LD+ + G +F + P I +R+G+F Sbjct: 61 EMPSGLMLGAGAKVVANQKNFSQGNMLTTENSLDWMISGSGFFEVLQPDGNIAYSRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI--SQKGKVIATMGLYSVD 164 DG +V++ Y V +VP + + VI + + Sbjct: 121 TTDGDGRVVTSGAGYVVQPEMNVPDDAQSITVSQDGEVSVRVAGQADNVVIGQITISDFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + + + T+ +G LE SN N E+ +I + Sbjct: 181 NPSGLEPIGQNLYTETAVSGAPVQGNPGVDGLGTIIQGSLETSNVNVTEELVNLIETQRV 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I ++ M + + Sbjct: 241 YEMNSKVISAVDEMMSYINQQL 262 >gi|325529016|gb|EGD06029.1| flagellar basal body rod protein FlgG [Burkholderia sp. TJI49] Length = 262 Score = 165 bits (416), Expect = 7e-39, Method: Composition-based stats. Identities = 47/259 (18%), Positives = 90/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + ++ +++N++N T GF+ + F +++ Sbjct: 1 MNRSLYIAATGMNAQQAQMDVISNNLANVSTNGFKGSRAGFEDLLYQTIRQPGANSTQQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V GS TG D A+ G +F + P G TRDG F Sbjct: 61 ELPSGLQLGTGVQQVATERLYTQGSLTQTGNSKDVAINGAGFFQVLMPDGTNAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 + G LV++SG + + + V S I ++ + + Sbjct: 121 QTNAQGQLVTSSGYQILPAITVPQNATSLTIGKDGVVSVTQPGSSNAVQIGSLQIATFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G R + S T+ +G++E SN N + E+ MI + + Sbjct: 181 PAGLEARGENLFSETTSSGAPNVSQPGLNGAGTLNQGYVEASNVNVVQELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + Sbjct: 241 EINSKAVTTSDQMLQTVTQ 259 >gi|145297456|ref|YP_001140297.1| lateral flagellar basal-body rod protein LfgG [Aeromonas salmonicida subsp. salmonicida A449] gi|142850228|gb|ABO88549.1| lateral flagellar basal-body rod protein LfgG [Aeromonas salmonicida subsp. salmonicida A449] Length = 261 Score = 165 bits (416), Expect = 7e-39, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 94/261 (36%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + +++++++N++N +TVGF+ +V F ++ ++ Sbjct: 1 MHAALWVSKTGLSAQDAKMASISNNLANVNTVGFKRDRVAFEDLFYQVQRQPGAQQDQQN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G F +T ELD A+ G +F +E P TR+G++ Sbjct: 61 LSPIGIQMGNGVRVVGTQKVFTPGQFQNTNQELDMAVVGAGFFGVERPDGETAYTRNGQW 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165 +G LV++ G + + Q+ + + L + Sbjct: 121 HRNAEGLLVNSDGLPMLPQIQIPDNATKVSIGTDGTVSATLPGQQENVELGRITLTNFTN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + +K+ LE SN N + EM MI + + Sbjct: 181 PAGLEALGGNLYRATGASGEAIEGVPGEEAMGAIKQFTLESSNVNVVEEMVDMITTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 ++ ++ + + + Sbjct: 241 EMNAKVVSAADQMLKFVTQAL 261 >gi|254251193|ref|ZP_04944511.1| flagellar basal-body rod protein [Burkholderia dolosa AUO158] gi|124893802|gb|EAY67682.1| flagellar basal-body rod protein [Burkholderia dolosa AUO158] Length = 262 Score = 165 bits (416), Expect = 7e-39, Method: Composition-based stats. Identities = 45/259 (17%), Positives = 90/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + ++ +++N++NT T GF+ + F +++ Sbjct: 1 MNRSLYIAATGMNAQQAQMDVISNNLANTSTNGFKASRAVFEDLLYQTIRQPGANSTQQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V G TG D A+ G +F + P G TRDG F Sbjct: 61 ELPSGLQLGTGVQQVATERLYTQGGLTQTGNSKDVAINGAGFFQVLMPDGTNAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 + G LV++SG + + + V S I ++ + + Sbjct: 121 QTNAQGQLVTSSGYQILPAITVPQNATSLTIGKDGVVSVTQPGSNNAVQIGSLQIATFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + T+ +G++E SN N + E+ MI + + Sbjct: 181 PAGLEAKGENLFAETTSSGAPNVSQPGLNGAGTLNQGYVEASNVNVVQELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + Sbjct: 241 EINSKAVTTSDQMLQTVTQ 259 >gi|169831888|ref|YP_001717870.1| flagellar basal body rod protein [Candidatus Desulforudis audaxviator MP104C] gi|169638732|gb|ACA60238.1| flagellar basal body rod protein [Candidatus Desulforudis audaxviator MP104C] Length = 246 Score = 165 bits (416), Expect = 7e-39, Method: Composition-based stats. Identities = 54/250 (21%), Positives = 96/250 (38%), Gaps = 13/250 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN-------DID 53 M + LA + RL VA N++N +T GFR F+ + I Sbjct: 1 MIRGVYTAASGMLAGQTRLDAVAHNIANVNTTGFRRQVPVFAPYLQTAVGRHEKRVTPIG 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113 G + TG +D ALEG+ +F +E + TR G FKV G Sbjct: 61 TTSLGTVPTALVTDLTGGPVVQTGRTMDLALEGEGFFTVEREGQQLYTRAGSFKVDASGI 120 Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRE 173 LV+ +G PVL + G S G+ + + L ++ + +VR Sbjct: 121 LVTRAGD-PVLGERGPLKVGHDGFTVSADGR--VFSSTGEELDRLRLTALPGRETWVRTP 177 Query: 174 NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 + + P + V +G+LE SN + E+ ++ ++ + + + + Sbjct: 178 DGYLMTGEATAPAIN---TRVHQGYLEGSNVHLAVELVDLLLASRLYAANQRVARTQDTL 234 Query: 234 MLEAIRNIAS 243 + +AI + + Sbjct: 235 VEKAINQVGA 244 >gi|258622490|ref|ZP_05717512.1| Putative flagellar basal-body rod protein flgG [Vibrio mimicus VM573] gi|258625232|ref|ZP_05720144.1| Putative flagellar basal-body rod protein flgG [Vibrio mimicus VM603] gi|258582479|gb|EEW07316.1| Putative flagellar basal-body rod protein flgG [Vibrio mimicus VM603] gi|258585190|gb|EEW09917.1| Putative flagellar basal-body rod protein flgG [Vibrio mimicus VM573] Length = 261 Score = 164 bits (415), Expect = 8e-39, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 96/261 (36%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M ++ + A + +++ +++N++N +T GF+ +V F ++ I+ Sbjct: 1 MHSALWVSKTGMAAQDTKMTAISNNLANVNTAGFKRDRVVFEDLFYNIQRQPGAQVDQVN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106 Q S V G+ +T ELD A+ G +F +E+ I+ TR+G+F Sbjct: 61 ELPTGVQLGSGVRVVGTQKVFTQGNAQNTAQELDLAVMGQGFFQIENSDGQIMYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 V +G +V++ G + + + V + + + L Sbjct: 121 HVNSEGLMVNSQGLPLEPQIQIPDNVVSLSIGVDGTVSATTAGDPAPQQLGQITLAKFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + E ++K+G LE SN + EM MI + + Sbjct: 181 PAGLEAVGGNLFRETDASGLAEELVAGQDGTGSIKQGALEGSNVQVVEEMVDMITTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 ++ + + +++ Sbjct: 241 EMNAKVVSATDDMLKFVAQSV 261 >gi|188534168|ref|YP_001907965.1| Flagellar basal-body rod protein [Erwinia tasmaniensis Et1/99] gi|188029210|emb|CAO97082.1| Flagellar basal-body rod protein [Erwinia tasmaniensis Et1/99] Length = 260 Score = 164 bits (415), Expect = 8e-39, Method: Composition-based stats. Identities = 42/259 (16%), Positives = 88/259 (33%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + + +A+N++N T GF+ + F +++ Sbjct: 1 MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLMYQTMRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + G+ T + D A+ G +F+++ P TRDG F Sbjct: 61 TLPSGLQIGTGTRPVATERLHNQGNLSQTDSSKDVAINGQGFFSVQMPDGTTAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQI-PQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 + +G LV+ +G + P + V + + + L + Sbjct: 121 QTDQNGQLVTNAGFPVQPAIVIPPNSLSMTISRDGVVSVTQQGQANPVQVGQLTLSTFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + T+ +G++E SN N E+ MI + + Sbjct: 181 DAGLSSMGENLYQETQASGAPNESNPGNNGAGTLYQGYVETSNVNVAEELVSMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + I +++ + + + Sbjct: 241 EINSKAISTSDQMLAKLTQ 259 >gi|90418392|ref|ZP_01226304.1| basal body rod protein flgG [Aurantimonas manganoxydans SI85-9A1] gi|90338064|gb|EAS51715.1| basal body rod protein flgG [Aurantimonas manganoxydans SI85-9A1] Length = 262 Score = 164 bits (415), Expect = 8e-39, Method: Composition-based stats. Identities = 45/253 (17%), Positives = 95/253 (37%), Gaps = 21/253 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----------- 50 + I A + + +A+N++N +T GF+ + +F++++ ++ Sbjct: 1 MRALAIAATGMNAQQTNVEVIANNIANINTTGFKRARAEFTDLLYQVERAQGVAARGGQG 60 Query: 51 ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP-RGIILTRDGRF 106 + Q G+ TG +LD AL G+ WF ++ P I+ TRDG F Sbjct: 61 VVPEGAQLGLGTRLAAIRNLHIQGTLNQTGNKLDLALNGEGWFQVQGPGGEILYTRDGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE-KGEISQKGKVIATMGLYSVDM 165 DG LV+ G + + + + + + L + Sbjct: 121 NTNGDGQLVTLDGLLVDPAITMPANTSEVIVNESGQVFARVGGAADLEELGQLTLATFAN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 + G + + I T+++G+LEDSN + + E+ ++I + + Sbjct: 181 NAGLAAQGGNLFRETIASGAPTAGVPGDEGYATLQQGYLEDSNVDPVKEISELISAQRAY 240 Query: 221 NSITTLIDENEKS 233 + +I ++ Sbjct: 241 EMNSKVISAADEM 253 >gi|170741836|ref|YP_001770491.1| flagellar basal body rod protein FlgG [Methylobacterium sp. 4-46] gi|168196110|gb|ACA18057.1| flagellar basal-body rod protein FlgG [Methylobacterium sp. 4-46] Length = 262 Score = 164 bits (415), Expect = 8e-39, Method: Composition-based stats. Identities = 42/256 (16%), Positives = 88/256 (34%), Gaps = 21/256 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55 + I A + L +A+N++N +T GF+ + +F++++ + Sbjct: 1 MRALAIAATGMNAQQLNLEVIANNVANLNTTGFKGARAEFTDLLYQAERQQGVPNQTGQE 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 V + G T LD A+ G +F + +P G + TR G F Sbjct: 61 AVPEGALLGLGVRAAAIRNLHRQGPLAQTSNNLDLAINGRGYFQVTNPNGEVNYTRAGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIP-QKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 + G LV+ G + + ++ V K + +++ + + + Sbjct: 121 NKSSTGQLVTLEGYVVEPAILFPANTVDVVINQSGQVYAKVDGQATPQLLGQLSIANFAN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G N V++G+LE SN + + E+ +I + F Sbjct: 181 ESGLEPLGNGLYRETAASGAPVTGVAGDTGFGKVQQGYLESSNVDPVKEITSLITAQRAF 240 Query: 221 NSITTLIDENEKSMLE 236 + +I ++ Sbjct: 241 EMNSKVIQAADEMAGT 256 >gi|119953550|ref|YP_945760.1| flagellar basal-body rod protein FlgF [Borrelia turicatae 91E135] gi|119862321|gb|AAX18089.1| flagellar basal-body rod protein FlgF [Borrelia turicatae 91E135] Length = 286 Score = 164 bits (415), Expect = 8e-39, Method: Composition-based stats. Identities = 50/278 (17%), Positives = 103/278 (37%), Gaps = 38/278 (13%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKND-------- 51 + +A RL +A+N++N D G++ F E++ ND Sbjct: 7 RGIYTAASGMMAQRHRLDVIANNLANIDLTGYKKDLSVQKAFPEMLIRRINDDGLYKFPK 66 Query: 52 --------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103 I + + V + Y S E G TG LD AL + +F +++P G TR+ Sbjct: 67 GYLETAPVIGKLGTGVEENEIYTSFEQGPLKITGNPLDLALTDEGFFVVQTPEGERYTRN 126 Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV--------- 154 G F + +G L++ G + + + ++ + + Sbjct: 127 GSFILGAEGILMTKDGYPVIGEKGYIYLKDNNFKITAQGQIFHNSTFERNPKKLVSEYEN 186 Query: 155 -------IATMGLYSVDMSQGFVRRENSGISPNI---PPTPLEDLSGVTVKRGFLEDSNA 204 + + + + + ++ ++ +S + +E S ++ G LE SN Sbjct: 187 SWENYELLDNLKIVNFEKTRFLQKQGSSLWNSTEISGQARNIEINSRPKIETGTLEGSNV 246 Query: 205 NSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 N++ EM MI + + + + I + + + I I Sbjct: 247 NAINEMVSMITVNRAYEANQKTIQTEDSLLGKLINEIG 284 >gi|295678056|ref|YP_003606580.1| flagellar basal-body rod protein FlgG [Burkholderia sp. CCGE1002] gi|295437899|gb|ADG17069.1| flagellar basal-body rod protein FlgG [Burkholderia sp. CCGE1002] Length = 262 Score = 164 bits (415), Expect = 8e-39, Method: Composition-based stats. Identities = 45/259 (17%), Positives = 91/259 (35%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + ++ +++N++N T GF+ + F +++ Sbjct: 1 MNRSLYIAATGMNAQQAQMDVISNNLANVSTNGFKGSRAVFEDLLYQTIRQPGANSTQQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+ TG D A+ G +F ++ P TRDG F Sbjct: 61 ELPSGIQLGTGVQQVATERLYTQGNLQQTGNSKDVAINGAGFFQVQMPDGQTAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 + G LV++SG + + +V S + + TM L + Sbjct: 121 QTNAQGQLVTSSGYQVIPAITIPANATSLTIGSDGSVSITVAGSSNTQQLGTMQLATFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + T+ +G++E SN N + E+ MI + + Sbjct: 181 PAGLDSKGENLFAETASSGAPNVAQPGLNGAGTLNQGYVEASNVNVVQELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + Sbjct: 241 EINSKAVTTSDQMLQTLSQ 259 >gi|170748107|ref|YP_001754367.1| flagellar basal body rod protein FlgG [Methylobacterium radiotolerans JCM 2831] gi|170654629|gb|ACB23684.1| flagellar basal-body rod protein FlgG [Methylobacterium radiotolerans JCM 2831] Length = 262 Score = 164 bits (415), Expect = 8e-39, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 88/257 (34%), Gaps = 21/257 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS---- 57 + I A + + +A+N+SN +T F+ + +F +++ + I Sbjct: 1 MRALAIAATGMNAQQLNVEVIANNISNLNTTAFKAARAEFKDLIYQAERPAGVPIQAGES 60 Query: 58 ----------FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 V + G +T LD A+ G WF + P G I TR G F Sbjct: 61 AIPEGAMLGLGVRNTAIRNLHRQGPLNNTTNPLDLAINGRGWFQVTMPNGEINYTRAGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQ-KDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 DG LV+A G + I +E V K + Q + I + L + Sbjct: 121 NKNADGRLVTAEGYSVDPAIIIPQNAIDVVINETGQVMVKVDGQQLPQTIGQLQLANFTN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G N +++G+LE SN + + E+ +I + F Sbjct: 181 DAGLEPLGNGLYRETAASGLPVTGFAADPGFGKIQQGYLETSNVDPVREITNLISAQRAF 240 Query: 221 NSITTLIDENEKSMLEA 237 + +I ++ Sbjct: 241 EMNSKVIQAADEMAGTI 257 >gi|42522134|ref|NP_967514.1| flagellar basal-body rod protein FlgG [Bdellovibrio bacteriovorus HD100] gi|39574665|emb|CAE78507.1| flagellar basal-body rod protein FlgG [Bdellovibrio bacteriovorus HD100] Length = 261 Score = 164 bits (415), Expect = 9e-39, Method: Composition-based stats. Identities = 45/262 (17%), Positives = 90/262 (34%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S N A + + +A+N++N T GF+ + +F +++ + + Sbjct: 1 MLKSLNTAATGMAAQQTNMDVIANNIANVSTAGFKRSRAEFEDLMYQTQKEPGTASGLNA 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRF 106 Q V + G T LD +EG +F + + TRDG F Sbjct: 61 YSPNGVQVGLGVRTAGVQKDFAGGQAQITKNPLDLQIEGSGFFQVLTADGETAYTRDGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQKGKVIATMGLYSVDM 165 K +G LV +G ++ + + + I + + + Sbjct: 121 KKDPNGRLVDKNGNTLQPEITVPANVSGIEVAPTGEVRVITGLNDVPQTIGQIDVVNFVN 180 Query: 166 SQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + +G LE SN N + EM MI + Sbjct: 181 PAGLKAMGKNLFTQTPSSGQAIASRPGLNGTGYLAQGQLESSNVNIVDEMVNMITAQRAM 240 Query: 221 NSITTLIDENEKSMLEAIRNIA 242 + + ++ +++ + +AI N+ Sbjct: 241 ETNSKVMQASDQML-QAINNLR 261 >gi|73539452|ref|YP_299819.1| flagellar basal body rod protein FlgG [Ralstonia eutropha JMP134] gi|72122789|gb|AAZ64975.1| Protein of unknown function DUF1078 [Ralstonia eutropha JMP134] Length = 261 Score = 164 bits (415), Expect = 9e-39, Method: Composition-based stats. Identities = 42/259 (16%), Positives = 85/259 (32%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + ++ +++N++N T GF+ + F +++ Sbjct: 1 MIRSLWIAKTGLDAQQTQMDVISNNLANVSTNGFKRGRAVFEDLMYQNIRQPGALSSDQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+ TG D A+ G +F + P TRDG F Sbjct: 61 TLPSGLQLGTGVRPVATERIHTQGNPQQTGNSKDVAIIGQGFFQVAMPDGTTAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQI-PQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V +G LV++SG + V S + + L + Sbjct: 121 QVDQNGQLVTSSGFVIQPAITIPANTTSMTVARDGTVSVTQPGSSNNVQVGQLQLATFMN 180 Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + +++ ++E SN N + E+ MI + + Sbjct: 181 PAGLESMGENLYVQTDASGAPNTTVPGLNGAGVLQQNYVEASNVNVVEELVSMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + Sbjct: 241 EINSKAVQTSDQMLQRLTQ 259 >gi|23015788|ref|ZP_00055555.1| COG4786: Flagellar basal body rod protein [Magnetospirillum magnetotacticum MS-1] Length = 261 Score = 164 bits (415), Expect = 9e-39, Method: Composition-based stats. Identities = 50/261 (19%), Positives = 105/261 (40%), Gaps = 22/261 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 S NI LA + + +++N++N +T F + +F++++ + Sbjct: 1 MRSLNIAATGMLAQQTNVEVISNNIANMNTTAFTRRRPEFADLLYQNLRRVGSQSSDTGT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q V + Y E GS ST LD A++G +F ++ P TRDG F Sbjct: 61 IVPTGVQLGLGVKTTAVYRITEQGSVQSTDNTLDMAVQGKGYFQIKLPSGETAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 +++ +G++V+ G + + + + V K + + ++ + L + Sbjct: 121 QLSPEGTIVTHEGYQVIPQVTIPSDAVGVTVDSTGQVIVKQDGQVQSQIKGQLTLATFAN 180 Query: 166 SQGFVRRENSG-ISPNIPPTPLEDLS----GVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G R + + P+ T+ +GFLE SN N + E+ +I + + Sbjct: 181 DAGLEARGGNLFMETPASGQPVVQTPGKPGFGTILQGFLETSNVNVVAEVTNLIGAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + +I +++ + I + Sbjct: 241 EMNSKVIQASDEML-STINQM 260 >gi|27904804|ref|NP_777930.1| flagellar basal-body rod protein FlgG [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|38372207|sp|Q89AH7|FLGG_BUCBP RecName: Full=Flagellar basal-body rod protein flgG; AltName: Full=Distal rod protein gi|27904202|gb|AAO27035.1| flagellar basal-body rod protein FlgG [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 260 Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats. Identities = 41/257 (15%), Positives = 89/257 (34%), Gaps = 20/257 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + I A + ++ +A+N++N +T GF+ K F +++ Sbjct: 1 MIPALWIAKTGLDAQQINMNVIANNLANVNTNGFKRSKAIFEDLIYHTVQQPGSKSSEET 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V G+ T + D A+ G+ +F ++ P G TRDG F Sbjct: 61 ISPSGFQLGTGVRPITTEREHSQGNLSKTNSLKDVAINGNGFFQVQLPDGNAAYTRDGSF 120 Query: 107 KVTDDGSLVSASGK-YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 ++ +G LV+ +G + + + + + + L + Sbjct: 121 QINPNGQLVTNNGFLIQPVINFPANGNNMSVSRDGIITVRIPEQTQPIRVGKLYLANFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + S + + + ++E SN N E+ MI + + Sbjct: 181 DSGLSNIGENLYQETEASGNPSISSPGSHGTGLLYQSYVETSNVNIAEELVNMIQAQRAY 240 Query: 221 NSITTLIDENEKSMLEA 237 + +I ++ + + Sbjct: 241 EINSKVITTADQMLQKL 257 >gi|46205476|ref|ZP_00048498.2| COG4786: Flagellar basal body rod protein [Magnetospirillum magnetotacticum MS-1] Length = 241 Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats. Identities = 75/242 (30%), Positives = 135/242 (55%), Gaps = 4/242 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 MQ S + L++Q+ALE+RL+T A+N++N T GFR +V FSE++ ++FV Sbjct: 1 MQNSLYVALSSQIALEKRLTTTANNVANMATAGFRAEEVSFSELLAKSSRG---DVAFVD 57 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 +GK LS+ G T + LD A++GDAW ++ P+G + TRDGR + +G L + G Sbjct: 58 AGKTALSRVAGPTTKTDSALDVAVQGDAWLGVKGPKGTLYTRDGRLTMDANGQLRTV-GG 116 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 PV+D P+ + + +G G I Q + +GL+++D R + ++ + Sbjct: 117 LPVVDPGGGPLLLDPQAGPPVIGRDGSIHQGVNQVGALGLFTLDPKAKLTRSGENAVAAS 176 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 +P P++D + + + +G++E +N N + EM ++I + + F S T+ E E ++ A++ Sbjct: 177 MPGQPVQDFTRLGIVQGYIEGANVNPILEMTKLIAIQRAFESAATMTSEAENTLTGAVKT 236 Query: 241 IA 242 Sbjct: 237 XG 238 >gi|253573527|ref|ZP_04850870.1| flagellar basal body rod protein FlgG [Paenibacillus sp. oral taxon 786 str. D14] gi|251847055|gb|EES75060.1| flagellar basal body rod protein FlgG [Paenibacillus sp. oral taxon 786 str. D14] Length = 274 Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats. Identities = 48/271 (17%), Positives = 95/271 (35%), Gaps = 32/271 (11%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ + +L + +N++N +TVGF++ +V F +++ + + Sbjct: 1 MLRSMYSGVSGMRGFQTKLDVIGNNIANVNTVGFKSGRVMFKDIMSQTVSGVTAPVDGES 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI---ILTRDG 104 Q V+ G GS ++T LD ++GD +F ++ LTR G Sbjct: 61 GGVNAKQIGLGVSIGSIDTLHTGGSAMTTNNPLDMRIDGDGFFLVKLTPDQEVPFLTRAG 120 Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM------ 158 F + G LV++ G V I + Sbjct: 121 DFHLDAAGQLVTSDGLLVCNSDGDVMEPIDFEAVTAFTIASDGTMMLKNPEGGTDPGEII 180 Query: 159 GLYSVDMSQGFVRRENSGISPNIP----------PTPLEDLSGVTVKRGFLEDSNANSMY 208 G+ V +G + + + + + G LE SN + Sbjct: 181 GVARVTNPEGLEKIGGNLYRVTLNAIADGELTYTNPNNAEEGTGALIVGQLEMSNVDLTG 240 Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E +MI + F + + +I +++ + E + Sbjct: 241 EFTEMIVAQRGFQANSRIITTSDEVLQEVVN 271 >gi|222084859|ref|YP_002543388.1| flagellar basal-body rod protein [Agrobacterium radiobacter K84] gi|221722307|gb|ACM25463.1| flagellar basal-body rod protein [Agrobacterium radiobacter K84] Length = 244 Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats. Identities = 107/242 (44%), Positives = 165/242 (68%), Gaps = 1/242 (0%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 MQ+ + L++Q+ALE+RL+TVADNM+N +T GFR +VKF++V+ +N ++ K++FV+ Sbjct: 1 MQSGIYVSLSSQMALERRLTTVADNMANVNTTGFRGTEVKFNQVLSNTENKLNAKVAFVS 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 G +YLS G +TG LDFA++G+AWF L +P G++LTRDGRF +TD G+LVSA G Sbjct: 61 QGNDYLSTSNGELQNTGNLLDFAVKGEAWFGLNTPAGLVLTRDGRFTMTDSGALVSARGY 120 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 PVLD PIQ+ V G I+Q K + +GLY+ D+S+GF+R NSG+ P Sbjct: 121 -PVLDPGGAPIQLDPTGGAPTVSSNGTITQNDKQVGQIGLYTSDVSKGFLRYNNSGVLPT 179 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 P P+ D S + V +G+LE+SN N + EM ++I +++ F++IT+L + +E ++ EAI+ Sbjct: 180 DTPQPVIDRSNIGVAQGYLENSNVNGLREMTELIEVSRAFDNITSLTNSSESTLSEAIKT 239 Query: 241 IA 242 + Sbjct: 240 LG 241 >gi|78221652|ref|YP_383399.1| flagellar basal body rod protein FlgG [Geobacter metallireducens GS-15] gi|78192907|gb|ABB30674.1| Flagellar basal-body rod FlgG [Geobacter metallireducens GS-15] Length = 262 Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats. Identities = 46/257 (17%), Positives = 88/257 (34%), Gaps = 20/257 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + + VA+N++N +T GF+ + F +++ Sbjct: 1 MIRALWTAASGMQAQQTNIDVVANNLANVNTAGFKKSRADFQDLMYQNMKTTGSPSTNTT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q +G+ TG ELD A+EGD ++ ++ P TR G F Sbjct: 61 QVPSGIQIGLGAKLAAVTKIFTIGNINQTGNELDMAIEGDGFYQIQMPDGTTTYTRSGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 K G +V++ G + ++ V + + + L Sbjct: 121 KRDSQGRVVTSDGYPLIPEIVIPNNATAINIGNDGTVSVSQAGQKSPTNVGNIQLAMFSN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + T +GFLE SN + M EM MI + + Sbjct: 181 PSGLLAIGKNLFQESDSSGNATTGTPGQNGLGTTAQGFLEMSNVSVMEEMVNMITGQRAY 240 Query: 221 NSITTLIDENEKSMLEA 237 + + ++ + A Sbjct: 241 EVNSKAVQTADEMLQTA 257 >gi|306820920|ref|ZP_07454540.1| flagellar basal-body rod protein FlgG [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551034|gb|EFM39005.1| flagellar basal-body rod protein FlgG [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 270 Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 51/269 (18%), Positives = 102/269 (37%), Gaps = 30/269 (11%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + + A + + +++N+SN +T GF+ K +F +++ N + Sbjct: 1 MRALWTAASGMKAQQLNVDVISNNISNVNTTGFKAQKTEFKDLLYTYSNPVSNEAKMGQP 60 Query: 54 ---QKISFVASGKEYLSKEVGSFISTGTELDFAL-EGDAWFALESPRGI------ILTRD 103 Q V GS T D A+ +G+A+F +E P + TRD Sbjct: 61 VNLQVGHGVMPVATSRIYTTGSADKTDNPTDLAMVQGNAFFVVEDPNAPGEEAKRLYTRD 120 Query: 104 GRFKVTDDGSLVS--ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK-----VIA 156 G FK + + + ++ S VL +QIP+ + F V + G ++ K + Sbjct: 121 GSFKFSVEDNQLTLVTSQGEKVLTTDDGYVQIPENSKDFAVSQNGTVTAKSAEGELLELG 180 Query: 157 TMGLYSVDMSQGFVRRENSGISPNI----PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQ 212 + + +G ++ P P + + +G+LE SN + EM + Sbjct: 181 QLKTVTFVNPEGLKAVGSNFYVPTDNSGEPVQEENETRESKIYQGYLEMSNVQLVDEMVR 240 Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIRNI 241 MI + + + + + + I + Sbjct: 241 MITAQRAYEINSKTVQTADDML-NTINQL 268 >gi|107023951|ref|YP_622278.1| flagellar basal body rod protein FlgG [Burkholderia cenocepacia AU 1054] gi|105894140|gb|ABF77305.1| Flagellar basal-body rod FlgG [Burkholderia cenocepacia AU 1054] Length = 262 Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 45/259 (17%), Positives = 90/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A A + ++ +++N++NT T GF+ + F +++ Sbjct: 1 MNRSLYIAAAGMNAQQAQMDVISNNLANTSTNGFKASRAVFEDLLYQTIRQPGANSTQQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V G TG D A+ G +F + P G TRDG F Sbjct: 61 ELPSGLQLGTGVQQVATERLYTQGGLTQTGNSKDVAINGAGFFQVLMPDGTNAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 + G LV++SG + + + V S I ++ + + Sbjct: 121 QTNAQGQLVTSSGYQVLPAITVPQNAQSLTIGKDGVVSVTQPGSSNAVQIGSLQIATFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + +G++E SN N + E+ MI + + Sbjct: 181 PTGLEAKGENLFAETTSSGAPNVSQPGLNGAGVLNQGYVEASNVNVVQELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + Sbjct: 241 EINSKAVTTSDQMLQTVTQ 259 >gi|157165544|ref|YP_001467096.1| flagellar basal body rod protein FlgG [Campylobacter concisus 13826] gi|112799947|gb|EAT97291.1| flagellar basal-body rod protein FlgG [Campylobacter concisus 13826] Length = 262 Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 40/261 (15%), Positives = 91/261 (34%), Gaps = 21/261 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S +A + ++ + N++N +T G++ + +F++++ + Sbjct: 1 MMRSLYTAATGMIAEQTQIDVTSHNIANVNTYGYKKNRAEFADLMYQVMEYAGTATSQTT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 V G F T LD + G+ +F ++ P TR+G F Sbjct: 61 TSPTGIEVGLGVRPTAINKIFSQGYFKETSNNLDMVIAGNGFFQIQLPDGTTAYTRNGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 K+ +G++V++ G + + V I + L + Sbjct: 121 KLDANGTIVNSDGYQLIPQITVPANATQISIGTDGTVSVLQAGETDMAQIGQIELANFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ + T+++GF+E SN + EM +I + + Sbjct: 181 PAGLHSMGDNNYLQTSASGDVVVGVAGLDGLGTIRQGFVEMSNVQLVEEMTDLITGQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + + I ++ + E + + Sbjct: 241 EANSKAITTSDSML-EIVNGL 260 >gi|15595120|ref|NP_212909.1| flagellar hook-basal body complex protein (flhO) [Borrelia burgdorferi B31] gi|2688723|gb|AAC67131.1| flagellar hook-basal body complex protein (flhO) [Borrelia burgdorferi B31] Length = 300 Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 48/278 (17%), Positives = 104/278 (37%), Gaps = 38/278 (13%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND-------- 51 + +A ++L TV++N++N D +G++ F E++ ND Sbjct: 21 RGIYTAASGMMAERRKLDTVSNNLANIDLIGYKKDLSIQKAFPEMLIRRLNDDGLYKFPK 80 Query: 52 --------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103 + + + V + Y E G +TG LD AL +F +++ G TR+ Sbjct: 81 GHLETAPVVGKIGTGVEENEIYTVFEQGPLKTTGNPLDLALTDQGFFVIQTSDGERYTRN 140 Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI--------------- 148 G F + +G LV+ SG + + + ++ Sbjct: 141 GSFTIGKEGILVTKSGFPVLGEKGYIYLKKNNFKITPQGQVFHNSNFESDPKRLVSEYEN 200 Query: 149 -SQKGKVIATMGLYSVDMSQGFVRRENSGIS---PNIPPTPLEDLSGVTVKRGFLEDSNA 204 + +++ T+ + + + + ++ NS + ++ ++ LE SN Sbjct: 201 SWENYELLDTIRIVNFENPRFLKKQGNSLWIDTKTSGKAQEIDISLRPKIETETLEASNV 260 Query: 205 NSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 N++ EM MI + + + + I + + + I I Sbjct: 261 NAVKEMVLMIEINRAYEANQKTIQTEDSLLGKLINEIG 298 >gi|89092138|ref|ZP_01165093.1| flagellar basal-body rod protein FlgG [Oceanospirillum sp. MED92] gi|89083873|gb|EAR63090.1| flagellar basal-body rod protein FlgG [Oceanospirillum sp. MED92] Length = 261 Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 84/261 (32%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + N+ A + L +++N++N TVGF+ V F +++ I+ Sbjct: 1 MHGALNVAKTGMTAQDTNLKVISNNLANVSTVGFKKDAVVFEDLMYQIRRQPGAQTAEEA 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q V + G T D A+ G + + P TR+G+ Sbjct: 61 QLPSGLQVGLGVRTVGTQKLFGTGEIEITEEAFDVAINGRGFLQVTLPNGDTAYTRNGQL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 + D LV+ G + + V + I + + Sbjct: 121 HLNADNELVTPEGYQINPAITLPGEVVNFSISTDGVVEVVTAGNNTPTQIGQLQMADFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 QG + + + +G LE SN NS+ E+ MI + + Sbjct: 181 PQGLQSLGQNLYQETGASGAPIISNPGENGTGILVQGALEGSNVNSVQELVDMITTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + +I ++ + + + Sbjct: 241 EMNSKVISTADEMLSYVSQQL 261 >gi|134297196|ref|YP_001120931.1| flagellar basal body rod protein FlgG [Burkholderia vietnamiensis G4] gi|134140353|gb|ABO56096.1| flagellar basal-body rod protein FlgG [Burkholderia vietnamiensis G4] Length = 262 Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 89/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + ++ +++N++NT T GF+ + F +++ Sbjct: 1 MNRSLYIAATGMNAQQAQMDVISNNLANTSTNGFKASRAVFEDLLYQTIRQPGANSTQQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V G TG D A+ G +F + P G TRDG F Sbjct: 61 ELPSGLQLGTGVQQVATERLYTQGGLTQTGNSKDVAINGAGFFQVLMPDGTNAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 + G LV++SG + + + V S I ++ + + Sbjct: 121 QTNAQGQLVTSSGYQILPAITVPQNAQSLTIGKDGVVSVTQPGSNNAVQIGSLQIATFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + +G++E SN N + E+ MI + + Sbjct: 181 PAGLEAKGENLFAETTSSGAPNVSQPGLNGAGVLNQGYVEASNVNVVQELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + Sbjct: 241 EINSKAVTTSDQMLQTVTQ 259 >gi|319409192|emb|CBI82836.1| Flagellar basal-body rod protein flgF [Bartonella schoenbuchensis R1] Length = 244 Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 73/242 (30%), Positives = 133/242 (54%), Gaps = 1/242 (0%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 MQ +G++ Q++L +R+ T+A NM+N +T GFR +KF +V + + ++ F + Sbjct: 1 MQNPIYVGVSGQISLARRMETIAQNMANVNTPGFRAGGMKFDTLVSPVAREQRDQVVFAS 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 +GK Y+S + G+ + TG LD A+ GD++F++++ G + TRDGR +T +G LVS +G Sbjct: 61 AGKGYISTDRGALVKTGNALDVAVGGDSYFSMQASFGPVYTRDGRMIMTPEGGLVSVTG- 119 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 P LD PIQ+ + G I QK ++ +GL+ N+ + P+ Sbjct: 120 LPFLDDGGAPIQLNPAGGTPRISADGSIYQKDVLVGKIGLFQFQKGTQLRYGPNASVIPD 179 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 P E G V +G++E SN N + EM ++I +++ F + ++ + E+ ++I+ Sbjct: 180 RPAMQSEGGIGDKVVQGYIESSNVNGVSEMTRLIEVSRAFERVEAMLRQQEEMRSKSIQI 239 Query: 241 IA 242 + Sbjct: 240 LG 241 >gi|159045791|ref|YP_001534585.1| flagellar basal body rod protein FlgF [Dinoroseobacter shibae DFL 12] gi|157913551|gb|ABV94984.1| flagellar basal-body rod protein FlgF [Dinoroseobacter shibae DFL 12] Length = 238 Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 70/242 (28%), Positives = 117/242 (48%), Gaps = 5/242 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + L+ Q AL++ ++ +A+N++N T G+R + FSE V A + IS Sbjct: 1 MDATQYTALSRQNALKREMTVIANNIANISTTGYRAEGLVFSEYVQATGHG-QASISMTD 59 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 SG + + G TG D A+EGD +F + +P G+ LTR G F+ +G LV+ G Sbjct: 60 SGAKITNYSQGMLRQTGGSFDMAIEGDGFFQVAAPEGVRLTRAGAFEPDANGLLVTPDGY 119 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 LD P+ IP V G +S G+ + +GL + R + PN Sbjct: 120 QL-LDAGGAPVFIPPDARSIAVAADGTLSADGRPLTNIGLVVPEDPLLMERAPGASFIPN 178 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 P E+ +V +GF+E SN N + E+ +MI + +++ S + ID+ + + I+ Sbjct: 179 GGVLPAEN---ASVHQGFIEGSNVNPIVEVARMIEVQRRYESAKSFIDKEDDRIKTVIQT 235 Query: 241 IA 242 + Sbjct: 236 LG 237 >gi|170722889|ref|YP_001750577.1| flagellar basal body rod protein FlgG [Pseudomonas putida W619] gi|169760892|gb|ACA74208.1| flagellar basal-body rod protein FlgG [Pseudomonas putida W619] Length = 261 Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 47/261 (18%), Positives = 97/261 (37%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + L+ +++N++N T GF+ + +F +++ IK Sbjct: 1 MLPALWVAKTGLSAQDTNLTVISNNLANVSTTGFKRDRAEFQDLLYQIKRQPGAQSTQDS 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 Q + V + + GS +T LD A+ G +F + P G + TRDG F Sbjct: 61 ELPSGLQVGTGVRIVGTQKNFQTGSLQTTENPLDMAVNGRGFFQVLQPDGTVSYTRDGTF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 + DG +V+A+G + Q + V + +VI + Sbjct: 121 HLNSDGQIVTANGFALEPAVVVPNDAQTFTVGQDGTVSITTAGNPAAQVIGNIQTADFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ + T + LE+SN +++ E+ MI + + Sbjct: 181 PAGLQAIGDNLFLETAASGAPQVGTPGLNGFGTTLQQTLENSNVSTVEELVNMITTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + +I ++ + + + Sbjct: 241 EMNSKVISTADQMLSFVTQQL 261 >gi|158422269|ref|YP_001523561.1| flagellar basal body rod protein FlgF [Azorhizobium caulinodans ORS 571] gi|158329158|dbj|BAF86643.1| flagellar basal body rod protein [Azorhizobium caulinodans ORS 571] Length = 240 Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 75/242 (30%), Positives = 132/242 (54%), Gaps = 4/242 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + L+ Q+A E+R++T+A+N++N +T G+R ++KFS ++ + I F + Sbjct: 1 MSNGLYVALSGQMATEKRMATIANNVANMNTPGYRAEEIKFSSIMA---EQGAKDIKFAS 57 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 +G+ Y S+ G T + D A++G WF++++P G+ TRDGRF VT DG LV + Sbjct: 58 TGESYTSRRAGPITYTNSPYDVAVQGKGWFSVKTPDGVAYTRDGRFNVTADGMLV-SVNN 116 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 YPVLD + I + G I Q + T+GL+ + + R +NS + P+ Sbjct: 117 YPVLDQGGTAVMIQPNQGELKITADGTIIQGTNPVGTLGLFEIPLDAKLKRYDNSAVIPD 176 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 TP+ D + +++G++E SN + + EM ++I + + F S I + E S ++IR Sbjct: 177 KAATPVTDYNSNAIRQGYVEGSNVDPVMEMTRLIMVQRAFESAAQAISQQETSGTDSIRA 236 Query: 241 IA 242 + Sbjct: 237 LG 238 >gi|259908810|ref|YP_002649166.1| Flagellar basal-body rod protein [Erwinia pyrifoliae Ep1/96] gi|224964432|emb|CAX55941.1| Flagellar basal-body rod protein [Erwinia pyrifoliae Ep1/96] gi|283478792|emb|CAY74708.1| Flagellar basal-body rod protein flgG [Erwinia pyrifoliae DSM 12163] gi|310767292|gb|ADP12242.1| Flagellar basal-body rod protein [Erwinia sp. Ejp617] Length = 260 Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 41/259 (15%), Positives = 88/259 (33%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I + + +A+N++N T GF+ + F +++ Sbjct: 1 MIRSLWIAKTGLDGQQTNMDVIANNLANVSTNGFKRQRAVFEDLMYQTLRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + G+ T + D A+ G +F+++ P G TRDG F Sbjct: 61 TLPSGLQIGTGTRPVATERLHNQGNLSQTDSSKDVAINGQGFFSVQLPDGTAAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQI-PQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 + +G LV+++G + + V + + + L + Sbjct: 121 QTDQNGQLVTSAGFPVQPAIVIPANSLSMTISRDGVVSVTQQGQANPVQVGQLTLSTFMN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + T+ +G++E SN N E+ MI + + Sbjct: 181 DAGLSSMGENLYQETQASGAPNESNPGNNGAGTLYQGYVETSNVNVAEELVSMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + I +++ + + + Sbjct: 241 EINSKAISTSDQMLAKLTQ 259 >gi|255261552|ref|ZP_05340894.1| flagellar basal-body rod protein FlgG [Thalassiobium sp. R2A62] gi|255103887|gb|EET46561.1| flagellar basal-body rod protein FlgG [Thalassiobium sp. R2A62] Length = 261 Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 98/259 (37%), Gaps = 21/259 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + I A + R+ +++N++N +T G+ + +F+++ Sbjct: 1 MRALQIAATGMAAQQMRVEVISNNLANMNTTGYNARRAEFADLHYQQIARPGTINAADGT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q V + G+ +TG +LD A+EG+ + + P G TRDG Sbjct: 61 VLPTGVQLGLGVRPTAVSMILSQGALSATGGDLDVAIEGEGYLEVTLPNGNAAYTRDGGL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 K T DG +V++ G V D+ + + + + +++ L Sbjct: 121 KRTGDGLIVTSDGFPVVPDITIPRDARSISINAEGEIYGYFTDRVEPELLGQFTLSGFTN 180 Query: 166 SQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 +G N+ P +++G+LEDS+ + + E+ +I + + Sbjct: 181 PRGLEAIGNNLFLETSASGPSIVTEPGQDGLGVLRQGYLEDSSVDPVKEVTDLIEAQRGY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + +I ++ + ++ Sbjct: 241 ELNSKVITAADQMLSSMVQ 259 >gi|296157454|ref|ZP_06840289.1| flagellar basal-body rod protein FlgG [Burkholderia sp. Ch1-1] gi|295892226|gb|EFG72009.1| flagellar basal-body rod protein FlgG [Burkholderia sp. Ch1-1] Length = 262 Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 90/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + ++ +++N++N T GF+ + F +++ Sbjct: 1 MNRSLYIAATGMNAQQAQMDVISNNLANVSTNGFKGSRAVFEDLLYQTIRQPGANSTQNT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+ TG D A+ G +F ++ P TRDG F Sbjct: 61 ELPSGIQLGTGVQQVATERLYTQGNLQQTGNSKDVAINGQGFFQVQMPDGTTAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 + G LV++SG + + V S + + +M + + Sbjct: 121 QTNAQGQLVTSSGYQVIPGITIPNNATSLTIGSDGVVSITVAGSTNSQQLGSMQVATFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + T+ +G++E SN N + E+ MI + + Sbjct: 181 PAGLDAKGENLFAETASSGAPNVAQPGLNGAGTLNQGYVEASNVNVVQELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + Sbjct: 241 EINSKAVTTSDQMLQTLSQ 259 >gi|226313061|ref|YP_002772955.1| flagellar hook protein FlgE [Brevibacillus brevis NBRC 100599] gi|226096009|dbj|BAH44451.1| flagellar hook protein FlgE [Brevibacillus brevis NBRC 100599] Length = 272 Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 47/269 (17%), Positives = 95/269 (35%), Gaps = 30/269 (11%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ + +L + +N++N +TVGF+ +V F +++ Sbjct: 1 MLRSMYSGISGLRGFQTKLDVIGNNIANVNTVGFKKGRVMFQDILSQNVQGAGAPTAGGK 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR--GIILTRDGR 105 Q + GS ++T D ++EGD +F + I TR G Sbjct: 61 GGTNPTQIGLGASIASIDTVFSAGSPMTTNLPTDLSIEGDGFFMVSPDEGATIYYTRAGN 120 Query: 106 FKVTDDGSLVSASGKYPVLDMA------SVPIQIPQKDEIFNVGEKGEISQKGKVIATMG 159 F +G LV++ G + + V + + T+G Sbjct: 121 FTRDAEGYLVNSQGMKLMNTDPAAIQISQNDGVVSYSIGKDGVITTVDETGALDSTNTIG 180 Query: 160 LYSVDMSQGFVRRENSGISPNIPPTPLEDLSG---------VTVKRGFLEDSNANSMYEM 210 + + + G + N+ + + V++ G LE SN + E Sbjct: 181 VMTFNNPGGLKKIGNNLYENTVNAGANDGDPMTPVTPADAKVSIIAGQLEMSNVDLSEEF 240 Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +MI + F + + +I ++ + E + Sbjct: 241 TEMIVAQRGFQANSRIITTSDTVLEELVN 269 >gi|149908757|ref|ZP_01897418.1| putative flagellar basal-body rod protein [Moritella sp. PE36] gi|149808299|gb|EDM68238.1| putative flagellar basal-body rod protein [Moritella sp. PE36] Length = 261 Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 52/261 (19%), Positives = 97/261 (37%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M ++ A + ++S +A+N++N +T GF+ +V FS++ IK Sbjct: 1 MSSALWTSKTGLAAQDVKMSIIANNLANVNTTGFKKDRVAFSDLFYDIKRQPGALADQNN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106 Q + V GSF TG ELD A+ G +F +E I TR+G+F Sbjct: 61 EIPTGVQVGNGVRVTGTQKVFTPGSFADTGQELDMAIIGKGFFQVEQVSGEIAYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165 + D +V++ G V + + + + L S Sbjct: 121 TLNSDSQIVNSDGLPLVPSIQIPADATSITIGSDGTITAQLAGESAPQDVGQITLASFAN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G V + + ++ S +K+ LE SN + + EM MI + + Sbjct: 181 PAGLVALGGNLYTETGSSGAAQEGVAGEASLGQIKQRGLEGSNVSVVEEMVDMISTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 ++ +K + +++ Sbjct: 241 EMNAKVVSAADKMLQFVTQSL 261 >gi|16126302|ref|NP_420866.1| flagellar basal-body rod protein FlgF [Caulobacter crescentus CB15] gi|221235079|ref|YP_002517515.1| flagellar basal-body rod protein FlgF [Caulobacter crescentus NA1000] gi|13637950|sp|Q06171|FLGF_CAUCR RecName: Full=Flagellar basal-body rod protein flgF gi|13423542|gb|AAK24034.1| flagellar basal-body rod protein FlgF [Caulobacter crescentus CB15] gi|220964251|gb|ACL95607.1| flagellar basal-body rod protein flgF [Caulobacter crescentus NA1000] Length = 245 Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 62/244 (25%), Positives = 111/244 (45%), Gaps = 4/244 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTI--KVKFSEVVGAIKNDIDQKISF 58 M + +GL+ Q+ L + L VA+N++N +T GF+ V+ + A D + F Sbjct: 1 MDNALYVGLSRQMTLRRELDIVANNIANANTTGFKVEDLMVRTEQAKPAKTLDGSSPVKF 60 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSAS 118 V + G TG + D A+ G +F +++ G TRDGRF +G LV+ + Sbjct: 61 VMDTGVARNFTQGPMTKTGGDYDLAINGMGFFKVQANGGERYTRDGRFTTNPEGILVTQA 120 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178 G PVLD I I + VG+ G +SQ + +GL D F + ++ Sbjct: 121 G-APVLDDGGGQITIDPRLGPVTVGKDGIVSQGAIRVGRIGLVRPDDLSTFAKDGDNLYR 179 Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 P + ++ + +G LE SN + E+ ++I + + + S+ ++D + A+ Sbjct: 180 NTTNTAP-QPVTDAQIHQGMLEASNVQPVIEITKLIEIQRAYESVAKMMDNTAELSRSAV 238 Query: 239 RNIA 242 + Sbjct: 239 ERLG 242 >gi|212637787|ref|YP_002314312.1| flagellar basal body rod protein [Shewanella piezotolerans WP3] gi|212559271|gb|ACJ31725.1| Flagellar basal body rod protein [Shewanella piezotolerans WP3] Length = 261 Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 44/261 (16%), Positives = 103/261 (39%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 MQ++ + A + +++T+A+N++N +T GF+ +V F+++ ++ Sbjct: 1 MQSALWVSKTGLTAQDTKMTTIANNLANVNTTGFKRDRVAFNDLFYQVQRQPGGQVDEQN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106 Q + G ++T +LD A+EG +F +E + +RDG+F Sbjct: 61 ELPSGLQLGTGTRVVGTQKVFTSGDMLTTNQQLDLAIEGQGFFQIEESNGDLSFSRDGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 +G +V++ G V ++ + V + + + + L + Sbjct: 121 YRNSEGLMVTSQGLPLVPNIEIPEEALTITIATDGIVSAQMAGQADAQELGQITLVNFTN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G R N+ + + +++G LE +N N + EM +MI + + Sbjct: 181 PAGLEARGNNLYRETGASGAAIEGVAGDQALGQIRQGALEGANVNVVEEMVEMISTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 ++ ++ + + + Sbjct: 241 EMNAKVVSASDDMLKFLNQAL 261 >gi|271500068|ref|YP_003333093.1| flagellar basal-body rod protein FlgG [Dickeya dadantii Ech586] gi|270343623|gb|ACZ76388.1| flagellar basal-body rod protein FlgG [Dickeya dadantii Ech586] Length = 260 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 42/259 (16%), Positives = 83/259 (32%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + + +++N++N T GF+ + F +++ Sbjct: 1 MIRSLWIAKTGLNAQQTNMDVISNNLANVSTNGFKRQRAVFEDLMYQTVRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 Q + V G TG D A+ G +F + P G TRDG F Sbjct: 61 TLPSGLQLGTGVRPVSTERIHTQGGLTETGNAKDLAINGAGFFQVLMPDGTTQYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 ++ +G LV++SG + V + + + L Sbjct: 121 QLDSNGQLVTSSGFQVQPAITIPANATNITVGRDGVVTVTQQGQTAPVQVGQLNLAMFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + + ++E SN N E+ MI + + Sbjct: 181 EAGLQNMGENLYAETASSGAPTQSTPGLNGAGLIMQKYVETSNVNVAEELVSMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + I ++ + + + Sbjct: 241 EINSKAISSTDQMLQKLTQ 259 >gi|115523179|ref|YP_780090.1| flagellar basal body rod protein FlgG [Rhodopseudomonas palustris BisA53] gi|115517126|gb|ABJ05110.1| flagellar basal-body rod protein FlgG [Rhodopseudomonas palustris BisA53] Length = 262 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 42/262 (16%), Positives = 89/262 (33%), Gaps = 21/262 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----------- 50 S I A + + +A+N++N +T ++ + +F+++ I Sbjct: 1 MRSLAIAATGMSAQQLNVEVIANNIANINTTSYKRSRAEFTDLFYQIDRMQGVPNRVGEG 60 Query: 51 ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + + V S G+ TG D A+ G WF + P + TR G F Sbjct: 61 AVPEGAKLGLGVRSAAVRKLHLQGALAQTGNAYDLAVNGRGWFQVVGPNGDTLYTRAGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQK-DEIFNVGEKGEISQKGKVIATMGLYSVDM 165 D LV+A G + +E V K + +++ + L + Sbjct: 121 NTNADAQLVTADGYKVDPTILIPEGTAQVTVNESGQVYAKLDTEVTPRLLGQLTLANFAN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ I + + +LE SN + + E+ ++I + + Sbjct: 181 EAGLDPLGSNLYKETIASGTPVVGFPGDIGFGKIHQHYLESSNVDPVKEITELISAQRSY 240 Query: 221 NSITTLIDENEKSMLEAIRNIA 242 + +I ++ + + Sbjct: 241 EMNSKVIQAADEMASTISKGLR 262 >gi|186477699|ref|YP_001859169.1| flagellar basal body rod protein FlgG [Burkholderia phymatum STM815] gi|184194158|gb|ACC72123.1| flagellar basal-body rod protein FlgG [Burkholderia phymatum STM815] Length = 262 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 91/259 (35%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + ++ T+++N++N T GF+ + F +++ Sbjct: 1 MNRSLYIAATGMNAQQAQMDTISNNLANVSTNGFKGSRAVFEDLLYQTIRQPGANSTQQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+ TG D A+ G +F ++ P TRDG F Sbjct: 61 ELPSGIQLGTGVQQVATERLYTQGNLQQTGNSKDVAINGQGFFQVQMPDGTTAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 + G LV++SG + + V S I ++ + + Sbjct: 121 QTNSQGQLVTSSGYQVLPAITIPQNATSLTIGSDGVVSVTTAGSTATTQIGSLQIATFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + T+ +G++E SN N + E+ MI + + Sbjct: 181 PTGLDAKGENLFAETTSSGTPNVATPGLNGAGTLNQGYVEASNVNVVQELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + Sbjct: 241 EINSKAVTTSDQMLQTLSQ 259 >gi|332088746|gb|EGI93858.1| flagellar basal-body rod protein FlgG [Shigella boydii 5216-82] Length = 260 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 42/259 (16%), Positives = 89/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M +S I A + + +A+N++N T GF+ + F +++ Sbjct: 1 MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V S G+ T D A++G +F + P TRDG F Sbjct: 61 TLPSGLQIGTGVRSVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGSSAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V +G LV+A G + + V + + + L + Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + + +G+++ SN N E+ MI + + + Sbjct: 181 DTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVDTSNVNVAEELVNMIQVQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + ++ + + + Sbjct: 241 EINSKAVSTTDQMLQKLTQ 259 >gi|319898631|ref|YP_004158724.1| flagellar basal-body rod protein flgF [Bartonella clarridgeiae 73] gi|319402595|emb|CBI76140.1| Flagellar basal-body rod protein flgF [Bartonella clarridgeiae 73] Length = 244 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 75/241 (31%), Positives = 135/241 (56%), Gaps = 1/241 (0%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 MQ +G++ Q+ LE+R+ T+A NM+N +T GFR +KF ++ + ++ ++ F + Sbjct: 1 MQNPIYVGVSGQIGLERRMETIAQNMANVNTPGFRAGGMKFDTLISPVAHEQGDRVFFTS 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 +GK Y+S + GS + TG LD A+ GD++F++++ G + TRDGR +T +G LVS +G Sbjct: 61 AGKGYISTDRGSLVQTGNALDIAVTGDSYFSMQASFGQVYTRDGRMIMTPEGGLVSVTG- 119 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 P LD PIQ+ I + G I Q ++ +GL+ NS + P+ Sbjct: 120 LPFLDEGGAPIQLDPVGGIPRIVSDGSIYQDNSLVGKIGLFQFQPGTQLRYGPNSSVIPD 179 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 E SG V +G++E SN N + EM ++I +++ F + +++ + E+ ++I+ Sbjct: 180 RAVLQSEAGSGDGVMQGYIESSNVNGVIEMTRLIEVSRAFERVESMLRQQEEMRSKSIQV 239 Query: 241 I 241 + Sbjct: 240 L 240 >gi|254255089|ref|ZP_04948406.1| Flagellar basal body rod protein [Burkholderia dolosa AUO158] gi|124899734|gb|EAY71577.1| Flagellar basal body rod protein [Burkholderia dolosa AUO158] Length = 261 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 51/258 (19%), Positives = 93/258 (36%), Gaps = 19/258 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + I A + +L T+A+N++N +TVGF+ + F ++ + Sbjct: 1 MNHALWISKTGIQAQDAKLQTIANNLANVNTVGFKRDRAVFEDLFYRTEQQPGAQIADNA 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFK 107 Q + + G+ +TG LD A+ GD + +E G TR G+ + Sbjct: 61 TGPGVQMGNGTRLVGTQKTFTAGNLQTTGQPLDVAIVGDGFLQVEMANGETGYTRAGQLR 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDMS 166 D+G L +A G V + E V S + + L + Sbjct: 121 RNDEGRLTNAQGLPLVPTIDIPADATSVTIGENGTVSVTTGSSAVPTEVGRLQLANFVNP 180 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFN 221 G + + P + V++G LE SN ++ EM +MI + + Sbjct: 181 AGLLAVGGNLFVETGASGPPSEGEPGADGLGVVRQGALEGSNVQAVEEMVEMITAQRTYE 240 Query: 222 SITTLIDENEKSMLEAIR 239 T ++ + M + Sbjct: 241 MSTKVLSAADSMMQYLAQ 258 >gi|308068661|ref|YP_003870266.1| flagellar basal-body rod protein flgG (Distal rod protein) [Paenibacillus polymyxa E681] gi|305857940|gb|ADM69728.1| Flagellar basal-body rod protein flgG (Distal rod protein) [Paenibacillus polymyxa E681] Length = 272 Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats. Identities = 52/269 (19%), Positives = 100/269 (37%), Gaps = 30/269 (11%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ + +L + +N++N +T GF++ +V F +++ + Sbjct: 1 MLRSMYSGVSGMKGFQTKLDVIGNNIANVNTTGFKSSRVMFKDILSQTSSGASAPGDAAG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI---ILTRDGR 105 Q G GS ++T D + GD +F ++ LTR G Sbjct: 61 GINAKQVGLGSTVGSIDTLHLPGSAMTTNNPTDLRINGDGFFLVKMTGDQEVPYLTRAGD 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQK-----GKVIATMGL 160 F V + LV++ G + PIQ+ F++ + G I Q+ +G+ Sbjct: 121 FHVDGNRQLVTSDGLFVADSGGGTPIQLNDLTTSFSISQDGTIVQQLSDGTVDNQTKVGV 180 Query: 161 YSVDMSQGFVRRENSGISPNIPPTPL----------EDLSGVTVKRGFLEDSNANSMYEM 210 V +G + S + D + G LE SN + E Sbjct: 181 TKVINPEGLEKIGGSLYRATVNSGEEGAVNPMEANSTDAGTGAIVAGQLEMSNVDLTGEF 240 Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +MI + F + + +I +++ + E + Sbjct: 241 TEMIVAQRGFQANSRIITTSDEVLQEVVN 269 >gi|134300225|ref|YP_001113721.1| hypothetical protein Dred_2386 [Desulfotomaculum reducens MI-1] gi|134052925|gb|ABO50896.1| protein of unknown function DUF1078 domain protein [Desulfotomaculum reducens MI-1] Length = 266 Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats. Identities = 53/264 (20%), Positives = 98/264 (37%), Gaps = 24/264 (9%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKF---------SEVVGAIKNDI 52 + + G + A + +L T+ +N++N +T F+ + F + + A + Sbjct: 3 IKTLSSGASGMRAHQLKLDTIGNNIANINTTAFKKNRTDFGEIVRQAIGEDGIPAANDPR 62 Query: 53 DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG----IILTRDGRF-- 106 + S V + G I TG +LD A+EG +F + G TRDG F Sbjct: 63 PEGGSGVRIVSLARVIDQGDLIQTGRDLDLAIEGQGFFKVTPATGDDDIEYYTRDGSFYI 122 Query: 107 -KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV--IATMGLYSV 163 + D+ LV++SG V D G+ + GK + + L++ Sbjct: 123 TTIDDETVLVNSSGYKLVWDGELDAETYKAYSVDEKGTVWGQRIEDGKTEEVGNIELFTF 182 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 G V + ++ ++ G+LE SN + EM MI + Sbjct: 183 PAPSGLVSKGSNLYMATEASGEETSGVPGEDGIGSIYSGYLERSNVDLATEMIGMIEAQR 242 Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242 + + + I ++ A N+ Sbjct: 243 AYAANSRTIQTADEMWDRA-NNLR 265 >gi|292489131|ref|YP_003532018.1| flagellar basal-body rod protein FlgG [Erwinia amylovora CFBP1430] gi|292900250|ref|YP_003539619.1| flagellar basal-body rod protein [Erwinia amylovora ATCC 49946] gi|291200098|emb|CBJ47224.1| flagellar basal-body rod protein [Erwinia amylovora ATCC 49946] gi|291554565|emb|CBA22177.1| Flagellar basal-body rod protein flgG [Erwinia amylovora CFBP1430] gi|312173289|emb|CBX81544.1| Flagellar basal-body rod protein flgG [Erwinia amylovora ATCC BAA-2158] Length = 260 Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 90/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + + +++N++N + GF+ + F +++ Sbjct: 1 MIRSLWIAKTGLEAQQTNMDVISNNLANVGSTGFKRQRAVFQDLLYQTMRQPGAQASEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + VA+ GS TG + D A++G +F ++ P TRDG F Sbjct: 61 TLPTGMQLGTGVATVATQRMHTQGSLTQTGRDYDMAIQGKGFFQVQLPDGTTAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 + ++G +V+A G D+ E V + I + L + Sbjct: 121 SLNENGQMVTAEGNPVQPDITVPADAQKLTVGEDGIVTATVPGQAAPQQIGQLTLANFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + +K ++E SN N E+ MI + + + Sbjct: 181 DAGLESLGGNLYAETQASGAPNEATPGMDGAGRLKHQYIETSNVNVAEELVTMIQVQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + Sbjct: 241 EINSKAVSASDQMLQRLAQ 259 >gi|262276415|ref|ZP_06054224.1| flagellar basal-body rod protein FlgG [Grimontia hollisae CIP 101886] gi|262220223|gb|EEY71539.1| flagellar basal-body rod protein FlgG [Grimontia hollisae CIP 101886] Length = 262 Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats. Identities = 46/262 (17%), Positives = 95/262 (36%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + + A + +ST+++N++N TVGF+ + F ++ N + Sbjct: 1 MHPALWVSKTGLDAQQTNISTISNNLANASTVGFKKSRAVFEDLFYQNINQPGGQSSQNT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + G+ +T LD +EGD +F + P I R+G+F Sbjct: 61 ELPSGLMLGAGSKVVATQRVHTNGNVQTTNNALDLMIEGDGFFQILLPDGNIGYQRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG--EISQKGKVIATMGLYSVD 164 + D+G +V++ YP+ VP Q + Q+ ++ + Sbjct: 121 TLNDEGVIVTSGAGYPLEPEIVVPPDAIQVTVGTDGEVSARLRGQQENAILGQITTVDFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + P ++ +V++ LE SN N E+ MI + Sbjct: 181 NPGGLEPIGQNLYLPTGASGDPQEGVPGLDGLGSVRQSMLETSNVNVTEELVNMIEAQRV 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I ++ + + + Sbjct: 241 YEMNSKVISSVDQMLSYVNQQL 262 >gi|323527711|ref|YP_004229864.1| flagellar basal-body rod protein FlgG [Burkholderia sp. CCGE1001] gi|323384713|gb|ADX56804.1| flagellar basal-body rod protein FlgG [Burkholderia sp. CCGE1001] Length = 262 Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 89/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + ++ +++N++N T GF+ + F +++ Sbjct: 1 MNRSLYIAATGMNAQQAQMDVISNNLANVSTNGFKGSRAVFEDLLYQTVRQPGANSTQQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+ TG D A+ G +F ++ P TRDG F Sbjct: 61 ELPSGIQLGTGVQQVATERLYTQGNLQQTGNSKDVAINGQGFFQVQMPDGTTAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQKGKVIATMGLYSVDM 165 + G LV++SG + + S + + TM L + Sbjct: 121 QTNAQGQLVTSSGYQVIPAITVPTNATSLTIGSDGAVSITVAGSTNTQQLGTMQLATFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + T+ +G++E SN N + E+ MI + + Sbjct: 181 PAGLDAKGENLFAETASSGAPNVAQPGLNGAGTLNQGYVEASNVNVVQELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + Sbjct: 241 EINSKAVTTSDQMLQTLSQ 259 >gi|94312671|ref|YP_585880.1| flagellar basal body distal rod protein [Cupriavidus metallidurans CH34] gi|93356523|gb|ABF10611.1| flagellar basal body distal rod protein [Cupriavidus metallidurans CH34] Length = 261 Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats. Identities = 45/259 (17%), Positives = 87/259 (33%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + ++ +++N++N T GF+ + F E++ Sbjct: 1 MIRSLWIAKTGLDAQQTQMDVISNNLANVSTTGFKRSRAVFEEMMYQTIRQPGAMSSDQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 Q + V G+ TG D A+ G+ +F + P G TRDG F Sbjct: 61 VLPSGMQIGTGVRPVATERIHTQGNPQQTGNAKDVAIIGNGFFQVTMPDGTTSYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIP-QKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V +G LV++SG + V S + + L + Sbjct: 121 QVDQNGQLVTSSGFVINPAITLPANYTSVNIARDGTVTVMQPGSTNAATVGQLQLATFPN 180 Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + T++ ++E SN N + E+ MI + + Sbjct: 181 PTGLESMGENLYVQTDASGAPNTTVPGLNGAGTLQNNYVEASNVNVVEELVSMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + Sbjct: 241 EINSKAVQTSDQMLQRLTQ 259 >gi|152997580|ref|YP_001342415.1| flagellar basal-body rod protein FlgG [Marinomonas sp. MWYL1] gi|150838504|gb|ABR72480.1| flagellar basal-body rod protein FlgG [Marinomonas sp. MWYL1] Length = 261 Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats. Identities = 49/261 (18%), Positives = 96/261 (36%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M ++ + A++++L+ VA+N++N T F+ + F +++ Sbjct: 1 MNSALWVSKTGLSAMDKQLNVVANNLANVSTTAFKKDRAVFEDLMYKTVRAPGGLSAQNA 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G G + T +LD A++G + + P I TR+G Sbjct: 61 ELPSGLQLGTGVKVGATQKDFSNGDYNMTDRQLDIAIQGKGFLQVLQPDGTIAYTRNGSL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 ++ G L ++ G + P I E V + + + + + Sbjct: 121 QLNSQGQLATSGGLVLEPGIQIDPDVIEIMIAEDGIVSVRKNGDADAQQVGAINIAGFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + P S T+ +G LE SN NS+ E+ MI + + Sbjct: 181 PTGLSSAGQNLFTETNASGPPLVGVPGTDSLGTIAQGMLEASNVNSIEELVNMITTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + +I + M AI+ + Sbjct: 241 EMNSKVIASADGMMSFAIQQL 261 >gi|307731361|ref|YP_003908585.1| flagellar basal-body rod protein FlgG [Burkholderia sp. CCGE1003] gi|307585896|gb|ADN59294.1| flagellar basal-body rod protein FlgG [Burkholderia sp. CCGE1003] Length = 262 Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 89/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + ++ +++N++N T GF+ + F +++ Sbjct: 1 MNRSLYIAATGMNAQQAQMDVISNNLANVSTNGFKGSRAVFEDLLYQTVRQPGANSTQNT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+ TG D A+ G +F ++ P TRDG F Sbjct: 61 ELPSGIQLGTGVQQVATERLYTQGNLQQTGNSKDVAINGQGFFQVQMPDGTTAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQKGKVIATMGLYSVDM 165 + G LV++SG + + S + + TM L + Sbjct: 121 QTNAQGQLVTSSGYQVIPAITVPSNATSLTIGSDGAVSISVAGSTNTQQLGTMQLATFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + T+ +G++E SN N + E+ MI + + Sbjct: 181 PAGLDAKGENLFAETASSGAPNVAQPGLNGAGTLNQGYVEASNVNVVQELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + Sbjct: 241 EINSKAVTTSDQMLQTLSQ 259 >gi|313894975|ref|ZP_07828534.1| flagellar basal-body rod protein FlgG [Selenomonas sp. oral taxon 137 str. F0430] gi|320530443|ref|ZP_08031501.1| flagellar basal-body rod protein FlgG [Selenomonas artemidis F0399] gi|312976428|gb|EFR41884.1| flagellar basal-body rod protein FlgG [Selenomonas sp. oral taxon 137 str. F0430] gi|320137276|gb|EFW29200.1| flagellar basal-body rod protein FlgG [Selenomonas artemidis F0399] Length = 264 Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats. Identities = 41/263 (15%), Positives = 88/263 (33%), Gaps = 23/263 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + + VA N++N +T G + ++ +F ++V + Sbjct: 1 MMRALWSAASGMKAQQAHMDIVAHNIANVNTHGGKKVRAEFQDLVYQTLREAGARNGTDS 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q G+ +T D ++G+ +F + P TRDG + Sbjct: 61 QYPTALQIGLGTRVAATQRIFTQGALQTTDNPTDIGIQGEGFFRVTLPDGSTAYTRDGTW 120 Query: 107 KVTDDGSLVSASGK---YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 K+ + +V+ G + + P + V + + + + L Sbjct: 121 KLDSNRRMVTTDGYLIADGIQIGENAPSESITISGDGRVSYREAGQTQQQEAGQITLARF 180 Query: 164 DMSQGFVRRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 G + + + T+ +G LE SN + EM +MI + Sbjct: 181 VNPAGLTSIGKNLFVVSDASGEAIESTPGLDGTGTLTQGTLEMSNVQIVEEMVEMIISQR 240 Query: 219 KFNSITTLIDENEKSMLEAIRNI 241 + S + I ++ + E + Sbjct: 241 AYESNSKAITTSDSML-EIANTL 262 >gi|170694394|ref|ZP_02885548.1| flagellar basal-body rod protein FlgG [Burkholderia graminis C4D1M] gi|170140817|gb|EDT08991.1| flagellar basal-body rod protein FlgG [Burkholderia graminis C4D1M] Length = 262 Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 90/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + ++ +++N++N T GF+ + F +++ Sbjct: 1 MNRSLYIAATGMNAQQSQMDVISNNLANVSTNGFKGSRAVFEDLLYQTVRQPGANSTQNT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+ TG D A+ G +F ++ P TRDG F Sbjct: 61 ELPSGIQLGTGVQQVATERLYTQGNLQQTGNSKDVAINGQGFFQVQMPDGTTAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 + G LV++SG + + V S + + +M + + Sbjct: 121 QTNAQGQLVTSSGYQVIPAITVPTNATSLTIGSDGVVSITVAGSTNSQQLGSMQIATFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + T+ +G++E SN N + E+ MI + + Sbjct: 181 PAGLDAKGENLFAETASSGAPNVAQPGLNGAGTLNQGYVEASNVNVVQELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + Sbjct: 241 EINSKAVTTSDQMLQTLSQ 259 >gi|220930463|ref|YP_002507372.1| hypothetical protein Ccel_3100 [Clostridium cellulolyticum H10] gi|220000791|gb|ACL77392.1| protein of unknown function DUF1078 domain protein [Clostridium cellulolyticum H10] Length = 270 Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats. Identities = 50/270 (18%), Positives = 101/270 (37%), Gaps = 29/270 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + + +++N++N +T G++ + +F +++ + Sbjct: 1 MMRALYTAGSGMKAQQFNVDVISNNLANVNTTGYKKERAEFKDLLYQTMDRAYVLNDAGK 60 Query: 54 ----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFK- 107 Q + E G+ T + LDFA++G+ +F + P+G + TRDG FK Sbjct: 61 PVNLQVGHGTVVSSTVRNFENGTPEQTSSNLDFAIDGEGFFTIMGPQGTVQYTRDGSFKL 120 Query: 108 ----------VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157 T DG V + +L V I + K + T Sbjct: 121 SITEDGMKKLTTADGYAVLDNSGEEILFDPEVNISELSVSPRGEMSYKDAEGVSVPMDQT 180 Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQ 212 +G+ N+ S N ++ + +K+GFLE SN + EM + Sbjct: 181 IGMVIFPNKYALEAVGNNLYSSNSATGEPVQVSEDENAKSIMKQGFLESSNVQVVDEMVK 240 Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 +I + + + I ++ + + N+ Sbjct: 241 LIVAQRAYEVSSKAIQSSDDML-QIANNLR 269 >gi|209521591|ref|ZP_03270289.1| flagellar basal-body rod protein FlgG [Burkholderia sp. H160] gi|209497974|gb|EDZ98131.1| flagellar basal-body rod protein FlgG [Burkholderia sp. H160] Length = 262 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 45/259 (17%), Positives = 91/259 (35%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + ++ +++N++N T GF+ + F +++ Sbjct: 1 MNRSLYIAATGMNAQQAQMDVISNNLANVSTNGFKGSRAVFEDLLYQTIRQPGANSTQQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+ TG D A+ G +F ++ P TRDG F Sbjct: 61 ELPSGIQLGTGVQQVATERLYTQGNLQQTGNSKDVAINGAGFFQVQMPDGTTAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 + G LV++SG + + +V S + + TM L + Sbjct: 121 QTNAQGQLVTSSGYQVIPAITIPTNATSLTIGSDGSVSITVAGSSNTQQLGTMQLATFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + T+ +G++E SN N + E+ MI + + Sbjct: 181 PAGLDAKGENLFAETASSGAPNVSQPGLNGAGTLNQGYVEASNVNVVQELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + Sbjct: 241 EINSKAVTTSDQMLQTLSQ 259 >gi|254503570|ref|ZP_05115721.1| conserved domain protein [Labrenzia alexandrii DFL-11] gi|222439641|gb|EEE46320.1| conserved domain protein [Labrenzia alexandrii DFL-11] Length = 243 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 76/243 (31%), Positives = 130/243 (53%), Gaps = 4/243 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 MQ++ + L+AQ+AL RL TV+ N++N +T G+R ++ F+E+V K+SF + Sbjct: 1 MQSALYVALSAQVALSNRLETVSRNVANMNTAGYRADEINFAEMVSKAG---PDKVSFSS 57 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119 G+ Y+S++ GS T LD A+EG+AWFA+ G+ TRDGR ++DDG+L + +G Sbjct: 58 GGENYISRQNGSLNKTDNPLDLAIEGEAWFAIRDANGGLSYTRDGRLHISDDGTLKTVTG 117 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 + V P I ++ +GL+ + R+ENS + P Sbjct: 118 QVVVGAGGQPIQLNPDGGTPLITQNGDIIQGDEDIVGQIGLFLIPNDAKLTRKENSAVVP 177 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + P++ +++G++E +N N + EM +MI +++ F S T +ID +S AIR Sbjct: 178 DRAVIPVQVFDQHGIRQGYVEGANINPVREMTKMIMISRAFESATKMIDMGSESQKTAIR 237 Query: 240 NIA 242 + Sbjct: 238 ELG 240 >gi|302383956|ref|YP_003819779.1| flagellar basal-body rod protein FlgG [Brevundimonas subvibrioides ATCC 15264] gi|302194584|gb|ADL02156.1| flagellar basal-body rod protein FlgG [Brevundimonas subvibrioides ATCC 15264] Length = 262 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 44/254 (17%), Positives = 98/254 (38%), Gaps = 21/254 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + + A + + +++N++N +TVG++ + +F +++ + Sbjct: 1 MRALRTAASGMAAQQLNVEVISNNIANMNTVGYKRQRAEFQDLIYQNVERMGAQSSSQGT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 Q V +G Y E G+ TG++ D A++G +F + P G I TR G F Sbjct: 61 VVPTGIQVGLGVKAGSVYRITEQGTPTQTGSDYDVAIDGQGYFQITMPSGEIGYTRAGNF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 ++ +G LV+ G ++ I V S + ++ + L + Sbjct: 121 SLSGEGQLVTEDGYAVEPAISIPQDAIDVTISKTGQVQVITAGSPEPAIVGQLELATFFN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ + P + +G+ E SN +++ E+ +I + + Sbjct: 181 EAGLEAIGDNLLLETAASGPATTGTPGETGFGQLLQGYTEASNVDAVTEISALIIAQRAY 240 Query: 221 NSITTLIDENEKSM 234 + +I ++ M Sbjct: 241 EMNSKVITTADEMM 254 >gi|153001470|ref|YP_001367151.1| flagellar basal body rod protein FlgG [Shewanella baltica OS185] gi|151366088|gb|ABS09088.1| flagellar basal-body rod protein FlgG [Shewanella baltica OS185] Length = 262 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 41/262 (15%), Positives = 93/262 (35%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + I A + ++ +++N++N TVG++ + F +++ N Sbjct: 1 MHPALWISKTGLDAQQTDIAVISNNVANASTVGYKKSRAVFEDLLYQTVNQAGGVSSSNT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 + G+ ++T LD +EG +F ++ P G TR+G+F Sbjct: 61 KLPNGLNIGAGTKVVATQKMFTQGNMLTTDNSLDLMIEGPGFFEIQLPDGTAAYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE--KGEISQKGKVIATMGLYSVD 164 + D G +V+ Y + ++P K + +V+ + + Sbjct: 121 TLDDTGQIVTPGSGYVLQPAITIPDNATSITVSAEGEISVKTPGTADNQVVGQLTMTDFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + + +++G LE SN N E+ +I + Sbjct: 181 NPSGLDPMGQNLYTETGASGTPIQGTASLDGMGAIRQGALETSNVNVTEELVNLIESQRI 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I ++ + +N+ Sbjct: 241 YEMNSKVISAVDQMLSYVTQNL 262 >gi|126175144|ref|YP_001051293.1| flagellar basal body rod protein FlgG [Shewanella baltica OS155] gi|217972600|ref|YP_002357351.1| flagellar basal body rod protein FlgG [Shewanella baltica OS223] gi|304409976|ref|ZP_07391595.1| flagellar basal-body rod protein FlgG [Shewanella baltica OS183] gi|307302311|ref|ZP_07582069.1| flagellar basal-body rod protein FlgG [Shewanella baltica BA175] gi|125998349|gb|ABN62424.1| flagellar basal-body rod protein FlgG [Shewanella baltica OS155] gi|217497735|gb|ACK45928.1| flagellar basal-body rod protein FlgG [Shewanella baltica OS223] gi|304351385|gb|EFM15784.1| flagellar basal-body rod protein FlgG [Shewanella baltica OS183] gi|306914349|gb|EFN44770.1| flagellar basal-body rod protein FlgG [Shewanella baltica BA175] Length = 262 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 41/262 (15%), Positives = 93/262 (35%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + I A + ++ +++N++N TVG++ + F +++ N Sbjct: 1 MHPALWISKTGLDAQQTDIAVISNNVANASTVGYKKSRAVFEDLLYQTVNQAGGVSSSNT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 + G+ ++T LD +EG +F ++ P G TR+G+F Sbjct: 61 KLPNGLNIGAGTKVVATQKMFTQGNMLTTDNSLDLMIEGPGFFEIQLPDGTAAYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE--KGEISQKGKVIATMGLYSVD 164 + D G +V+ Y + ++P K + +V+ + + Sbjct: 121 TLDDTGQIVTPGSGYVLQPAITIPDNATSITVSAEGEVSVKTPGTADNQVVGQLTMTDFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + + +++G LE SN N E+ +I + Sbjct: 181 NPSGLDPMGQNLYTETGASGTPIQGTASLDGMGAIRQGALETSNVNVTEELVNLIESQRI 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I ++ + +N+ Sbjct: 241 YEMNSKVISAVDQMLSYVTQNL 262 >gi|295706277|ref|YP_003599352.1| flagellar hook protein FlgE [Bacillus megaterium DSM 319] gi|294803936|gb|ADF41002.1| flagellar hook protein FlgE [Bacillus megaterium DSM 319] Length = 263 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 49/261 (18%), Positives = 96/261 (36%), Gaps = 23/261 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ + +L + +N++N +T G++ + F ++V Sbjct: 1 MLRSMYSGISGMKNFQTKLDVLGNNIANVNTYGYKKGRTTFQDLVSQQVAGATAPGANRG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 Q G + GS STG LD A+ GD +F + TR G F + Sbjct: 61 GVNAKQVGLGSQIGTIDTVQTAGSIQSTGRPLDLAISGDGYFVVRDGVTNYYTRAGNFYL 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS-----V 163 G+LV+ G Y I IP + +++G G+++ + Sbjct: 121 DSSGNLVTGDGLYVQKTG-GGNINIPSTSKSYSIGADGKVNIIDANGNISSNQTVELAKF 179 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQ 218 ++G + + + ++ + + LE SN + E MI + Sbjct: 180 ANNEGLQKAGGNLFAQSVNSGGPLVGAPGANGTGSFVSSALEMSNVDLSEEFTDMIVAQR 239 Query: 219 KFNSITTLIDENEKSMLEAIR 239 F + T +I +++ + E + Sbjct: 240 GFQANTRIITTSDEILQELVN 260 >gi|297570292|ref|YP_003691636.1| flagellar basal-body rod protein FlgF [Desulfurivibrio alkaliphilus AHT2] gi|296926207|gb|ADH87017.1| flagellar basal-body rod protein FlgF [Desulfurivibrio alkaliphilus AHT2] Length = 244 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 57/236 (24%), Positives = 102/236 (43%), Gaps = 8/236 (3%) Query: 8 GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLS 67 G+ LA E+RL VA+N++N DT G++ V F E++ + + + Sbjct: 12 GVETMLAQERRLDQVANNLANVDTAGYKKDAVSFWEMLYQANAERQRVGKALRVHT---D 68 Query: 68 KEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMA 127 + G TG LD A++G+ +F +++ +GI TR G F++ G L + G + D Sbjct: 69 HQQGHVDPTGNPLDLAIQGEGFFRIQTDQGIRYTRAGSFQLDPMGQLRTPEGGLVLGDG- 127 Query: 128 SVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE 187 I F V G + G + + + V+ ++ + + Sbjct: 128 ---GPIVVDGNNFAVERDGRVMVDGVQVNQLEVVGVNDLTNLIKEGRNLFRLAAEGEEMP 184 Query: 188 DLSGV-TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 + V++GFLE SN NS+ EM MI L + + + +I + +AI + Sbjct: 185 LEAMNFQVRQGFLEKSNVNSVEEMTTMIDLQRSYEAQQKMIQAIDDMDEQAISRVG 240 >gi|91792666|ref|YP_562317.1| flagellar basal body rod protein FlgG [Shewanella denitrificans OS217] gi|91714668|gb|ABE54594.1| Flagellar basal-body rod FlgG [Shewanella denitrificans OS217] Length = 262 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 43/262 (16%), Positives = 95/262 (36%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + I A + +S +++N++N T+G++ + F +++ N Sbjct: 1 MHPALWISKTGLDAQQTDISVISNNVANASTIGYKKSRAVFEDLLYQTVNQAGGISADNT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 + G+ ++T LD +EG +F ++ P G TR+G+F Sbjct: 61 KLPNGLNIGAGTKVVATQKMFSQGNMLTTDNSLDLMIEGPGFFEVQLPDGTPAYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF--NVGEKGEISQKGKVIATMGLYSVD 164 + D G +V+ Y + ++P V K + + +VI + + Sbjct: 121 SLDDTGQIVTPGSGYVLQPAITIPENATGITVSAGGEVSVKIPGTAESQVIGQITMTDFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + + +++G LE SN N E+ +I + Sbjct: 181 NPSGLDPLGQNLYTETGASGTPIQGTASLDGLGAIRQGALETSNVNVTEELVNLIQSQRI 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I ++ + +N+ Sbjct: 241 YEMNSKVISAVDQMLAYINQNL 262 >gi|317050614|ref|YP_004111730.1| flagellar hook-basal body protein [Desulfurispirillum indicum S5] gi|316945698|gb|ADU65174.1| flagellar hook-basal body protein [Desulfurispirillum indicum S5] Length = 259 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 47/254 (18%), Positives = 99/254 (38%), Gaps = 15/254 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDIDQKIS 57 M + + ++L A+N++N +TVGF+ + F + D ++ Sbjct: 1 MVNGLYTSASGMVLQSRKLDASANNLANVNTVGFKKDIISVDNFRAKSTTREEDAWRRTL 60 Query: 58 FVASGKEYLS-------KEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTD 110 F + + G+ TG LD + G+A+ +++P G TR G ++ Sbjct: 61 FNETINNTHNIAKIHVDHSQGALHQTGNSLDVGINGNAFLVVDTPFGERYTRGGNLQIDS 120 Query: 111 DGSLVSASGKYPVL-----DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 +G L + G D + + +GEI + IAT+ L + Sbjct: 121 EGRLTTKEGYPLKAALEEDDAEGPAHIFLPEASDIIINAQGEIFVDEEFIATLSLVRFED 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225 + + + ++ + +G+LE SN N + EM M+ L + F++ Sbjct: 181 ERDLRKVGFNQLARVSADVEAYPAEHFELHQGYLESSNVNIVREMTDMVELNRSFSAYQK 240 Query: 226 LIDENEKSMLEAIR 239 +I ++++ ++ Sbjct: 241 MISSIDETVSTLLQ 254 >gi|153834448|ref|ZP_01987115.1| flagellar basal-body rod protein FlgG [Vibrio harveyi HY01] gi|156973589|ref|YP_001444496.1| flagellar basal body rod protein FlgG [Vibrio harveyi ATCC BAA-1116] gi|269961601|ref|ZP_06175963.1| flagellar basal-body rod protein FlgG [Vibrio harveyi 1DA3] gi|148869144|gb|EDL68176.1| flagellar basal-body rod protein FlgG [Vibrio harveyi HY01] gi|156525183|gb|ABU70269.1| hypothetical protein VIBHAR_01292 [Vibrio harveyi ATCC BAA-1116] gi|269833642|gb|EEZ87739.1| flagellar basal-body rod protein FlgG [Vibrio harveyi 1DA3] Length = 262 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 47/262 (17%), Positives = 95/262 (36%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + + A + ++T+++N++N TVG++ + F ++ N + Sbjct: 1 MHPALWVSKTGLDAQQTNIATISNNLANASTVGYKKSRAVFEDLFYQNINQPGGQSSQNT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + G+ +T LD +EGD +F + P I TR+G+F Sbjct: 61 ELPSGLMLGAGSKVVATQKVHTHGNAQTTTNALDMMVEGDGFFQVTLPDGNIGYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD--EIFNVGEKGEISQKGKVIATMGLYSVD 164 + +G+LV++ YPV +P V + Q V+ + + Sbjct: 121 TLDGEGTLVTSGSGYPVEPEIVIPEDAISITVGTDGEVSVRIRGEQNNVVVGQLTITDFV 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + P ++ +++ LE SN N E+ MI + Sbjct: 181 NPGGLEPIGQNLYLPTGASGDPQEGVPGLDGLGEIRQSMLEASNVNVTEELVNMIEAQRV 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I +K M + + Sbjct: 241 YEMNSKVISSVDKMMSFVNQQL 262 >gi|90422610|ref|YP_530980.1| flagellar basal body rod protein FlgG [Rhodopseudomonas palustris BisB18] gi|90104624|gb|ABD86661.1| Flagellar basal-body rod FlgG [Rhodopseudomonas palustris BisB18] Length = 262 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 39/256 (15%), Positives = 84/256 (32%), Gaps = 21/256 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----------- 50 + I A + + +A+N++N +T ++ + +F+++ I Sbjct: 1 MRALAIAATGMSAQQLNVEVIANNIANINTTSYKRARAEFTDLFYQIDRMQGVPNRVGEG 60 Query: 51 ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + + V S G+ TG D A+ G WF + P + TR G F Sbjct: 61 AVPEGAKLGLGVRSAAVRKLHLQGALTQTGNPYDLAVNGRGWFQVVGPNGETLYTRAGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE-KGEISQKGKVIATMGLYSVDM 165 DG LV+A G + + K + + + + L + Sbjct: 121 NTNADGQLVTADGYNVDPAILIPQGTVEVTVNESGQVFAKLDGEITPRELGRLTLANFAN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ + + +LE SN + + E+ ++I + + Sbjct: 181 EAGLDPLGSNLYKETLSSGVPVVGVPGDPGFGKIYHHYLESSNVDPVKEITELISAQRSY 240 Query: 221 NSITTLIDENEKSMLE 236 + +I ++ Sbjct: 241 EMNSKVITAADEMAQT 256 >gi|225181584|ref|ZP_03735025.1| flagellar basal body rod protein [Dethiobacter alkaliphilus AHT 1] gi|225167692|gb|EEG76502.1| flagellar basal body rod protein [Dethiobacter alkaliphilus AHT 1] Length = 259 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 47/257 (18%), Positives = 85/257 (33%), Gaps = 19/257 (7%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 A +Q++ A N++N +T G++ FS++V Sbjct: 3 IRGLWNAAGGMRAQQQKIDVTAHNIANVNTTGYKKKTTLFSDLVYQSIERRGNAVEPAAA 62 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP-RGIILTRDGRFK 107 G+++ T +LD A+ GD +F + P G+ TRDG F Sbjct: 63 GEHPKTVGVGSKVAAIRSDLRPGTYLQTDRDLDMAIVGDGYFQITLPGGGMAYTRDGSFS 122 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 +G++V++ G V Q + + L D Sbjct: 123 RDSEGNIVNSQGYRVVFPQL-PEGQYEVNVAPEGAVSAVYEDGTVVPLGMLQLAYFDNPH 181 Query: 168 GFVRRENSGISPNIPPTPLE---DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224 G + ++ + G V +G+LE SN + EM Q+I + F + Sbjct: 182 GLEQLGDNLLQATPASGAALLAFPGEGSRVSQGYLESSNVDLAAEMTQLIINQRSFELNS 241 Query: 225 TLIDENEKSMLEAIRNI 241 + E+ M + Sbjct: 242 RALRTAEE-MWSIANQL 257 >gi|312115249|ref|YP_004012845.1| flagellar basal-body rod protein FlgG [Rhodomicrobium vannielii ATCC 17100] gi|311220378|gb|ADP71746.1| flagellar basal-body rod protein FlgG [Rhodomicrobium vannielii ATCC 17100] Length = 261 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 41/259 (15%), Positives = 89/259 (34%), Gaps = 20/259 (7%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + ++ +A + + +A+N++N +TV F+ + +F++++ + Sbjct: 1 MRALSVAATGMVAQQTNVEVIANNIANANTVAFKRSRAEFADLLYQSERAAGVPNRSDAD 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRF 106 Q V GS TG LD AL G WF + + + TR G F Sbjct: 61 AIPEASQIGLGVQPVAIRSLHTQGSLTKTGNSLDLALNGRGWFQITGANNETLYTRAGTF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 G LV+ G + + + + + + + + Sbjct: 121 SKNASGQLVTPDGYTVIPSITIPTNTTSIQVNTDGTVYVDPGTGVMAQVGQLTIATFVND 180 Query: 167 QGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221 G N+ I + TV++ ++E SN + + E+ +I + + Sbjct: 181 AGLEALGNNLFRETISSGSAQVQVPGSEGYATVQQYYVESSNVDPVQEITNLISAQRNYE 240 Query: 222 SITTLIDENEKSMLEAIRN 240 + +I ++ +N Sbjct: 241 MNSKVIQAADEMFQVLTKN 259 >gi|168335334|ref|ZP_02693430.1| Flagellar basal body and hook proteins [Epulopiscium sp. 'N.t. morphotype B'] Length = 256 Score = 163 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 51/257 (19%), Positives = 105/257 (40%), Gaps = 18/257 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDI----- 52 M +R+ ++++++N++T +R F EV+ + I Sbjct: 1 MVRGLYTAATGMQVQTRRMDVISNDLANSNTTAYRKDYAVVEAFDEVLMKRLDGINEPPW 60 Query: 53 -----DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107 ++ Y G+ I TG + A+ G +F +E+P G LTRDG F Sbjct: 61 RYKDLGTVMNGAKVADIYTDFRPGNLILTGISNNLAINGLGFFRVETPNGERLTRDGSFT 120 Query: 108 VTDDGSLVSASGKYPVLDMASVP--IQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 V DG LV+A G + + + + V G++ I T+ + +VD Sbjct: 121 VNGDGVLVTAXGYPVLGENGQIALGRTFLNEGREMQVLPDGQVVLNTVTINTIDIVNVDD 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225 Q V+ ++ + +++G+LE SN N + M MI +++ + + Sbjct: 181 PQLLVKEADNLFDATGLQLNPIN---SLIEQGYLESSNVNPVNAMVDMISVSRAYEANQR 237 Query: 226 LIDENEKSMLEAIRNIA 242 ++ +++ + A+ ++ Sbjct: 238 MVQIHDELVGRAVNDVG 254 >gi|160876201|ref|YP_001555517.1| flagellar basal body rod protein FlgG [Shewanella baltica OS195] gi|160861723|gb|ABX50257.1| flagellar basal-body rod protein FlgG [Shewanella baltica OS195] gi|315268391|gb|ADT95244.1| flagellar basal-body rod protein FlgG [Shewanella baltica OS678] Length = 262 Score = 163 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 41/262 (15%), Positives = 94/262 (35%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + I A + ++ +++N++N TVG++ + F +++ N Sbjct: 1 MHPALWISKTGLDAQQTDIAVISNNVANASTVGYKKSRAVFEDLLYQTVNQAGGVSASNT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 + G+ ++T LD +EG +F ++ P G TR+G+F Sbjct: 61 KLPNGLNIGAGTKVVATQKMFTQGNMLTTDNSLDLMIEGPGFFEIQLPDGTAAYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE--KGEISQKGKVIATMGLYSVD 164 + D G +V+ Y + ++P K + + +V+ + + Sbjct: 121 TLDDTGQIVTPGSGYLLQPAITIPDNATSITVSAEGEVSVKTPGTAENQVVGQLTMTDFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + + +++G LE SN N E+ +I + Sbjct: 181 NPSGLDPMGQNLYTETGASGTPIQGTASLDGMGAIRQGALETSNVNVTEELVNLIESQRI 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I ++ + +N+ Sbjct: 241 YEMNSKVISAVDQMLSYVTQNL 262 >gi|259907636|ref|YP_002647992.1| Flagellar basal-body rod protein, FlgG [Erwinia pyrifoliae Ep1/96] gi|224963258|emb|CAX54742.1| Flagellar basal-body rod protein, FlgG [Erwinia pyrifoliae Ep1/96] gi|283477478|emb|CAY73394.1| Flagellar basal-body rod protein flgG [Erwinia pyrifoliae DSM 12163] Length = 260 Score = 163 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 89/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + + +++N++N + GF+ + F +++ Sbjct: 1 MIRSLWIAKTGLEAQQTNMDVISNNLANVGSTGFKRQRAVFQDLLYQTMRQPGAQASEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + VA+ GS TG + D A++G +F ++ P TRDG F Sbjct: 61 TLPTGMQLGTGVATVATQRMHTQGSLTQTGRDYDMAIQGKGFFQVQLPDGTTAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 + ++G +V+A G D+ E V + I + L + Sbjct: 121 SLNENGQMVTAEGNPVQPDITVPADAQKLTVGEDGIVTATVPGQAAPQQIGQLTLANFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + +K ++E SN N E+ MI + + + Sbjct: 181 DAGLESLGGNLYVETQASGAPNEATPGMDGAGRLKHQYIETSNVNVAEELVTMIQVQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + Sbjct: 241 EINSKAVSASDQMLQRLAQ 259 >gi|254461663|ref|ZP_05075079.1| flagellar basal-body rod protein FlgG [Rhodobacterales bacterium HTCC2083] gi|206678252|gb|EDZ42739.1| flagellar basal-body rod protein FlgG [Rhodobacteraceae bacterium HTCC2083] Length = 262 Score = 163 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 47/259 (18%), Positives = 103/259 (39%), Gaps = 20/259 (7%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------- 55 + ++ A + R+ +A+N+SN +TVGF++ +V F ++ +K + Sbjct: 4 NAMHVAKTGLNAQQTRMQVIANNLSNLNTVGFKSDRVNFESLLYQVKRGGGDQTSEGTEL 63 Query: 56 ------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKV 108 + V + G ++T D A++G +F + P + TR+G F Sbjct: 64 TSALALGTGVRAVNTQKLYSQGGMVNTDNSFDLAIDGQGFFQVLIPDGRVGYTRNGSFSR 123 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIP-QKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 + +G+L +ASG ++ + + V + ++ + + + L S + Sbjct: 124 SAEGALTTASGYVVQPEIRIPDDVVEVNVSQDGIVSVRSAAQKEPQEVGQLTLASFANPR 183 Query: 168 GFVRRENS-GISPNIPPTP----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222 G S + P + + +G LE SN N + ++ +MI + + Sbjct: 184 GLQPVGESFLVQTAASGDPTVASPQAQGIGKLVQGSLESSNVNVVQQLVEMIETQRAYEV 243 Query: 223 ITTLIDENEKSMLEAIRNI 241 + I +++ M N+ Sbjct: 244 SSKSITASDEMMRYISNNL 262 >gi|91785632|ref|YP_560838.1| flagellar basal body rod protein FlgG [Burkholderia xenovorans LB400] gi|91689586|gb|ABE32786.1| flgG; flagellar basal-body rod protein [Burkholderia xenovorans LB400] Length = 262 Score = 163 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 90/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + ++ +++N++N T GF+ + F +++ Sbjct: 1 MNRSLYIAATGMNAQQAQMDVISNNLANVSTNGFKGSRAVFEDLLYQTIRQPGANSTQNT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+ TG D A+ G +F ++ P TRDG F Sbjct: 61 ELPSGIQLGTGVQQVATERLYTQGNLQQTGNSKDVAINGQGFFQVQMPDGTTAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 + G LV++SG + + V S + + +M + + Sbjct: 121 QTNAQGQLVTSSGYQVIPAITIPNNATSLTIGSDGVVSITVAGSTNSQQLGSMQIATFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + T+ +G++E SN N + E+ MI + + Sbjct: 181 PAGLDAKGENLFAETASSGAPNVAQPGLNGAGTLNQGYVEASNVNVVQELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + Sbjct: 241 EINSKAVTTSDQMLQTLSQ 259 >gi|222147565|ref|YP_002548522.1| flagellar basal body rod protein FlgF [Agrobacterium vitis S4] gi|221734553|gb|ACM35516.1| flagellar basal body rod protein [Agrobacterium vitis S4] Length = 244 Score = 163 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 102/242 (42%), Positives = 157/242 (64%), Gaps = 1/242 (0%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 MQ+ + L++Q AL++RL+T+ADNM+N +TVGFR +VKF EVV ND + KI+FV+ Sbjct: 1 MQSGMYVSLSSQRALDKRLTTIADNMANVNTVGFRGTEVKFDEVVSRTGNDQNAKIAFVS 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 G +YL+ + G + TG LDFA++GDAWF++++P G LTRDGRF +T G LVS G Sbjct: 61 QGNDYLNTQSGEMLQTGGTLDFAVKGDAWFSIDTPAGPALTRDGRFTMTSTGQLVSVRGY 120 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 LD PIQ+ +VG G I+Q G+ I+ +GL++ D+S+G++R ENSG+ Sbjct: 121 SV-LDAGGGPIQLDPNGGEPHVGADGTINQNGRQISQIGLFTADISKGYLRTENSGVITT 179 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 P + D + + V +G++E SN N + +M Q+I +++ F SI+ + + E SM E I+ Sbjct: 180 DRPQAVVDDATIGVMQGYVEQSNVNGISQMTQLIQVSRAFESISASMSQTENSMSETIKT 239 Query: 241 IA 242 + Sbjct: 240 LG 241 >gi|254182892|ref|ZP_04889485.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei 1655] gi|254299684|ref|ZP_04967133.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei 406e] gi|157809479|gb|EDO86649.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei 406e] gi|184213426|gb|EDU10469.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei 1655] Length = 262 Score = 163 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 50/259 (19%), Positives = 94/259 (36%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + I A + +L VA+N++N +TVGF+ +V F ++ ++ Sbjct: 1 MNQAMWISKTGLQAQDAKLQAVANNLANVNTVGFKRDRVVFEDLFYRVERQPGAQLDQDN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 Q S GS +TG LD A+ G + + G TR G+ Sbjct: 61 ASPSGIQMGSGTRIVGTQKIFTDGSVQTTGQSLDVAVMGKGFIQVLMANGETGYTRAGQL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 + +G LV+A G +++ E V + + + L + Sbjct: 121 SINAEGLLVNAQGLPLQPEISIPENATDIAIGENGIVAATMPGASSPSEVGQIQLANFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + ++ + P + T +K+G LE SN + EM MI + + Sbjct: 181 PAGLLALGDNLYMETVASGPPNEGEPGTDVFGKIKQGALEGSNVQVVEEMVDMIAAQRTY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 T ++ + + + + Sbjct: 241 EMNTKVLSAADNMLQQLSQ 259 >gi|310764858|gb|ADP09808.1| Flagellar basal-body rod protein, FlgG [Erwinia sp. Ejp617] Length = 260 Score = 163 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 89/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + + +++N++N + GF+ + F +++ Sbjct: 1 MIRSLWIAKTGLEAQQTNMDVISNNLANVGSTGFKRQRAVFQDLLYQTMRQPGAQASEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + VA+ GS TG + D A++G +F ++ P TRDG F Sbjct: 61 TLPTGMQLGTGVATVATQRMHTQGSLTQTGRDYDMAIQGKGFFQVQLPDGTTAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 + ++G +V+A G D+ E V + I + L + Sbjct: 121 SLNENGQMVTAEGNPLQPDITVPADAQKLTVGEDGIVTATVPGQAAPQQIGQLTLANFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + +K ++E SN N E+ MI + + + Sbjct: 181 DAGLESLGGNLYVETQASGAPNEATPGMDGAGRLKHQYIETSNVNVAEELVTMIQVQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + Sbjct: 241 EINSKAVSASDQMLQRLAQ 259 >gi|87306343|ref|ZP_01088490.1| flagellar hook basal body protein flgG [Blastopirellula marina DSM 3645] gi|87290522|gb|EAQ82409.1| flagellar hook basal body protein flgG [Blastopirellula marina DSM 3645] Length = 266 Score = 163 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 40/261 (15%), Positives = 93/261 (35%), Gaps = 24/261 (9%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK-------------ND 51 L+ +L +++N++N +T F+ ++ F ++ + Sbjct: 6 LYTAATGMQTLQTKLDVISNNLANVNTTAFKKDRINFEDLFYDNRVLPGKLDGSSNPTPT 65 Query: 52 IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTD 110 V + G+F T LD+ + G +F + P TR G F + Sbjct: 66 GTHIGMGVRVQSTQTDYQQGAFRETDRSLDWTIRGKGFFQVLDPTGQTYYTRAGNFSINA 125 Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV----IATMGLYSVDMS 166 +G +V+ S S+ I + + + G+ + + L + Sbjct: 126 NGEIVTGSAGVGRPLEPSITIPQDTTGIEVSSDGIVSVQRPGQQTLEEVGQIQLANFINP 185 Query: 167 QGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221 +G ++ ++ S + +V++GFLE SN + E+ +I + F Sbjct: 186 EGLLKLGDNLYSETNASSAAIVGNPNIDGFGSVEKGFLEASNVEPVQELVDLITTQRAFE 245 Query: 222 SITTLIDENEKSMLEAIRNIA 242 + + ++ + + + N+ Sbjct: 246 LNSQTVQAGDQIL-QLVSNLR 265 >gi|187925759|ref|YP_001897401.1| flagellar basal body rod protein FlgG [Burkholderia phytofirmans PsJN] gi|187716953|gb|ACD18177.1| flagellar basal-body rod protein FlgG [Burkholderia phytofirmans PsJN] Length = 262 Score = 163 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 90/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + ++ +++N++N T GF+ + F +++ Sbjct: 1 MNRSLYIAATGMNAQQAQMDVISNNLANVSTNGFKGSRAVFEDLLYQTVRQPGANSTQNT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+ TG D A+ G +F ++ P TRDG F Sbjct: 61 ELPSGIQLGTGVQQVATERLYTQGNLQQTGNSKDVAINGQGFFQVQMPDGTTAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 + G LV++SG + + V S + + +M + + Sbjct: 121 QTNAQGQLVTSSGYQVIPAITIPNNATSLTIGSDGVVSITVAGSTNSQQLGSMQIATFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + T+ +G++E SN N + E+ MI + + Sbjct: 181 PAGLDAKGENLFAETASSGAPNVAQPGLNGAGTLNQGYVEASNVNVVQELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + Sbjct: 241 EINSKAVTTSDQMLQTLSQ 259 >gi|83594175|ref|YP_427927.1| flagellar basal body rod protein FlgG [Rhodospirillum rubrum ATCC 11170] gi|83577089|gb|ABC23640.1| conserved hypothetical protein [Rhodospirillum rubrum ATCC 11170] Length = 261 Score = 163 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 45/257 (17%), Positives = 95/257 (36%), Gaps = 21/257 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + NIG LA + + +++N++N +T + + +F +++ Sbjct: 1 MRALNIGATGMLAQQTNVEVISNNIANMNTTAYTRRRAEFHDLLYQNLRRAGSNSSDTGT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q V + Y E GS ST LD A++G +F ++ P TRDG F Sbjct: 61 IVPTGVQLGLGVKTAAVYRITEQGSVTSTNNALDLAIQGKGYFQIDLPSGETAYTRDGAF 120 Query: 107 KVTDDGSLVSASGKYPV-LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 +++ +G +V+ G L + + V K + + Sbjct: 121 QLSPNGEIVTHDGYRVTGLGAIPTNAESITINPTGEVLYKIDGQTALVNAGQIQTAIFPN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ ++ T+ +G+LE SN N + E+ ++I + + Sbjct: 181 DAGLNAIGDNYLTETAGSGAPTVGVPGSVGFGTILQGYLESSNVNVVSEITELISAQRAY 240 Query: 221 NSITTLIDENEKSMLEA 237 + +I +++ + Sbjct: 241 EMNSKVITTSDEMLSTI 257 >gi|134280724|ref|ZP_01767434.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei 305] gi|167725932|ref|ZP_02409168.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei DM98] gi|125657220|gb|ABN48708.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei] gi|134247746|gb|EBA47830.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei 305] Length = 262 Score = 163 bits (411), Expect = 3e-38, Method: Composition-based stats. Identities = 50/259 (19%), Positives = 94/259 (36%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + I A + +L VA+N++N +TVGF+ +V F ++ ++ Sbjct: 1 MNQAMWISKTGLQAQDAKLQAVANNLANVNTVGFKRDRVVFEDLFYRVERQPGAQLDQDN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 Q S GS +TG LD A+ G + + G TR G+ Sbjct: 61 ASPSGIQMGSGTRIVGTQKIFTDGSVQTTGQSLDVAVMGKGFIQVLMANGETGYTRAGQL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 + +G LV+A G +++ E V + + + L + Sbjct: 121 SINAEGLLVNAQGLPLQPEISIPENAADIAIGENGIVAATMPGASSPSEVGQIQLANFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + ++ + P + T +K+G LE SN + EM MI + + Sbjct: 181 PAGLLALGDNLYMETVASGPPNEGEPGTDVFGKIKQGALEGSNVQVVEEMVDMIAAQRTY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 T ++ + + + + Sbjct: 241 EMNTKVLSAADNMLQQLSQ 259 >gi|187478187|ref|YP_786211.1| flagellar basal body rod protein FlgG [Bordetella avium 197N] gi|115422773|emb|CAJ49301.1| flagellar basal-body rod protein [Bordetella avium 197N] Length = 261 Score = 163 bits (411), Expect = 3e-38, Method: Composition-based stats. Identities = 39/260 (15%), Positives = 84/260 (32%), Gaps = 21/260 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I + + + ++ N++N T GF+ + F +++ Sbjct: 1 MMRSLWIAKTGLESQQTSMDVISHNLANVQTNGFKRERAVFQDLMYQTLRQPGAQVGDAN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + G+ +TG E+D A++G +F ++ P G TRDG Sbjct: 61 QLPTGLQLGTGARVAATQRLHSAGNLNNTGAEMDVAIQGRGFFQVDLPDGTQAYTRDGGL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG--KVIATMGLYSVD 164 + +G L + G + + V G I + + + Sbjct: 121 GMDQNGQLTTMGGYVIQPPINVPDNALSMAINKEGVVSVTLPGNAGVNVQIGQLQVATFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + P ++ + ++E SN N E+ MI + Sbjct: 181 NPAGLQSVGENLYLETDASGPANLLQPGADGAGSIMQNYVETSNVNVAEELVNMITAQRA 240 Query: 220 FNSITTLIDENEKSMLEAIR 239 + + + +++ + + Sbjct: 241 YEMNSKAVKTSDEMLARLTQ 260 >gi|312136040|ref|YP_004003378.1| fagellar hook-basal body protein [Caldicellulosiruptor owensensis OL] gi|311776091|gb|ADQ05578.1| fagellar hook-basal body protein [Caldicellulosiruptor owensensis OL] Length = 255 Score = 163 bits (411), Expect = 3e-38, Method: Composition-based stats. Identities = 50/258 (19%), Positives = 100/258 (38%), Gaps = 21/258 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVV--------GAIK 49 M + + ++ + A+N++N T GF+ F ++ + Sbjct: 1 MIRGIYTSASGMILNQKLMDITANNVANVSTTGFKRDVAQVESFRNMLVYRIYDKTSSPD 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-----ILTRDG 104 N I + G +I T L+ A+ G+ +F +E P + TR+G Sbjct: 61 NAIGYMSLGSDVSRIVSDFSQGLYIKTDEPLNLAIRGNGFFTVEVPESEGGQQVLYTRNG 120 Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 F + G LV+ G Y + + Q + ++G I Q G+ + + + Sbjct: 121 AFTLNSRGELVTIDGFYVLG---QNGRIVLQNHGQIRIDDQGNIYQNGRFVDRLRIVDFQ 177 Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224 Q + N+ + + + +G+LE SN NS+ EM MI++ + + + Sbjct: 178 DKQLLRKVGNNLFEADAG--AQQIPFSGKILQGYLEGSNVNSVQEMVNMINVLRAYEANQ 235 Query: 225 TLIDENEKSMLEAIRNIA 242 ++++ +AI IA Sbjct: 236 KAFTIQDETLQKAISEIA 253 >gi|24374755|ref|NP_718798.1| flagellar basal body rod protein FlgG [Shewanella oneidensis MR-1] gi|24349419|gb|AAN56242.1|AE015761_12 flagellar basal-body rod protein FlgG [Shewanella oneidensis MR-1] Length = 262 Score = 163 bits (411), Expect = 3e-38, Method: Composition-based stats. Identities = 41/262 (15%), Positives = 93/262 (35%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + I A + +S +++N++N TVG++ + F +++ N Sbjct: 1 MHPALWISKTGLDAQQTDISVISNNVANASTVGYKKSRAVFEDLLYQTVNQAGGISASNT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + G+ ++T LD +EG +F ++ P TR+G+F Sbjct: 61 KLPNGLNIGAGTKVVATQKMFTQGNMLTTDNSLDLMIEGPGFFEIQLPDGTTAYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE--KGEISQKGKVIATMGLYSVD 164 + D G +V+ Y + ++P K + + +V+ + + Sbjct: 121 TLDDTGQIVTPGSGYVLQPPITIPEDATSITVSAEGEVSVKTPGAAENQVVGQLSMTDFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + + +++G LE SN N E+ +I + Sbjct: 181 NPSGLDPMGQNLYTETGASGTPIQGTASLDGMGAIRQGALETSNVNVTEELVNLIESQRI 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I ++ + +N+ Sbjct: 241 YEMNSKVISAVDQMLAYVNQNL 262 >gi|317047693|ref|YP_004115341.1| flagellar basal-body rod protein FlgG [Pantoea sp. At-9b] gi|316949310|gb|ADU68785.1| flagellar basal-body rod protein FlgG [Pantoea sp. At-9b] Length = 260 Score = 163 bits (411), Expect = 3e-38, Method: Composition-based stats. Identities = 42/259 (16%), Positives = 85/259 (32%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S I A + + +A+N++N T GF+ + F +++ + Sbjct: 1 MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRSRAVFEDLMYQTVRQPGTQSSEQT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 + V G+ T D A+ G +F ++ P G TRDG F Sbjct: 61 TLPSGMQIGTGVRPVTTERLHTQGNLSQTSNSKDLAINGQGYFEVQMPDGTSAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V +G LV+ SG + V + + + L + Sbjct: 121 QVDQNGQLVTNSGYTVQPGITIPANATSITVSRDGIVSVTQQGQTNPTQVGQLTLSTFMN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + +G++E SN N E+ MI + + Sbjct: 181 DAGLDSLGENLYQETQASGAATQSTPGQNGAGLLYQGYVETSNVNVAEELVSMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + + Sbjct: 241 EINSKAVSTSDQMLAKLTQ 259 >gi|163852465|ref|YP_001640508.1| flagellar basal body rod protein FlgF [Methylobacterium extorquens PA1] gi|163664070|gb|ABY31437.1| flagellar basal body rod protein [Methylobacterium extorquens PA1] Length = 246 Score = 163 bits (411), Expect = 3e-38, Method: Composition-based stats. Identities = 63/247 (25%), Positives = 118/247 (47%), Gaps = 9/247 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN-----DIDQK 55 MQ + +G++AQ AL + L +A+NM+N T GF+ +F E + + + D++ Sbjct: 1 MQNALFVGVSAQTALARELDVIANNMANVSTTGFKARSARFQEYLMPVASADSFQRSDRR 60 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115 +S+V L GS + AL GDA+ +++P+G+ TR+G F++ G+LV Sbjct: 61 LSYVIDQGTPLDLTQGSVEPDSNPMHVALRGDAFLTVQTPQGLRYTRNGAFELDATGNLV 120 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 ++ G D PI I Q++ + G IS + + L + +Q + Sbjct: 121 TSDGHAVQGD--GGPITIGQQETGLAIAPDGTISTNLGIRGRLRLVTFPNAQALKSEGAN 178 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 S P P + ++ G LE SN + EM +++ + + ++ ++++I + Sbjct: 179 LFSSEAPARPAGPGAH--LEPGALERSNVKPVVEMTRLMDVNRTYSMVSSVISRLDDLRG 236 Query: 236 EAIRNIA 242 AIR +A Sbjct: 237 TAIRRLA 243 >gi|126444737|ref|YP_001061248.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei 668] gi|126224228|gb|ABN87733.1| flagellar basal-body rod protein FlgG [Burkholderia pseudomallei 668] Length = 262 Score = 163 bits (411), Expect = 3e-38, Method: Composition-based stats. Identities = 49/259 (18%), Positives = 94/259 (36%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + I A + +L VA+N++N +TVGF+ +V F ++ ++ Sbjct: 1 MNQAMWISKTGLQAQDAKLQAVANNLANVNTVGFKRDRVVFEDLFYRVERQPGAQLDQDN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRF 106 Q S GS +TG LD A+ G + + + TR G+ Sbjct: 61 ASPSGIQMGSGTRIVGTQKIFTDGSVQTTGQSLDVAVMGKGFIQVLMANGDTGYTRAGQL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 + +G LV+A G +++ E V + + + L + Sbjct: 121 SINAEGLLVNAQGLPLQPEISIPENATDIAIGENGIVAATMPGASSPSEVGQIQLANFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + ++ + P + T +K+G LE SN + EM MI + + Sbjct: 181 PAGLLALGDNLYMETVASGPPNEGEPGTDVFGKIKQGALEGSNVQVVEEMVDMIAAQRTY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 T ++ + + + + Sbjct: 241 EMNTKVLSAADNMLQQLSQ 259 >gi|91204383|emb|CAJ70883.1| strongly similar to flagellar distal rod protein [Candidatus Kuenenia stuttgartiensis] Length = 262 Score = 163 bits (411), Expect = 3e-38, Method: Composition-based stats. Identities = 48/262 (18%), Positives = 102/262 (38%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + A + L V++N+SN +T GF+ +V F +++ + + Sbjct: 1 MLRALYTAATGMKAQQLFLDNVSNNLSNINTTGFKRSQVNFQDLLYSKRYIAGSESAQGF 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106 Q V + G+ ++T ELD A++G +F ++ I TRDG F Sbjct: 61 EIPAGIQLGGGVRTISISKVFSQGNHVNTERELDLAIQGKGFFQIQQSDGSIAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLD-MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 ++ G +V+A G + +I + + + S + + + L Sbjct: 121 QLNSKGEVVTADGLPLSPSITITNATEISIGTDGTVYVKGSDPSGTLQNVGQIMLTMFPN 180 Query: 166 SQGFVRRENSGI-SPNIPPTPLE----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + +P+ + + +GFLE+SN ++ E+ +I + + Sbjct: 181 PSGLDSLGKNLYLETMASGSPIVTVAGEQGTGEIYQGFLENSNVETVTELVSLITAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNIA 242 + I +++ + I ++A Sbjct: 241 EINSRAISASDEML-STINSMA 261 >gi|24214555|ref|NP_712036.1| endoflagellar distal basal body rod protein [Leptospira interrogans serovar Lai str. 56601] gi|45657887|ref|YP_001973.1| hook protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|24195518|gb|AAN49054.1| endoflagellar distal basal body rod protein [Leptospira interrogans serovar Lai str. 56601] gi|45601128|gb|AAS70610.1| hook protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 287 Score = 163 bits (411), Expect = 3e-38, Method: Composition-based stats. Identities = 50/285 (17%), Positives = 101/285 (35%), Gaps = 44/285 (15%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKF------------SEVVGAI 48 M G + + R+ +++N++N D F+ F + VG + Sbjct: 1 MLRGIYTGANGMIIQQTRMDVISNNLANVDKTAFKRDTTIFKTFPELLLHRFDEDGVGKV 60 Query: 49 KND-------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA------WFALESP 95 I + + Y E G+ T D L+ +F++ + Sbjct: 61 PMGSFDTAPVIGKLGLGGEVNEVYTRFEQGAVKKTENPFDLMLQDKPGSEHPAFFSVMTN 120 Query: 96 RGIILTRDGRFKVTDDGSLVSASGKYPVLDMASV-----PIQIPQKDEIFNVGEKGEISQ 150 RG L+R G F + +G LV+ G + + + I + E++ GE G Sbjct: 121 RGERLSRSGAFVMDTNGFLVTPQGFPLLGENGPIRVARGNFLIKENGEVWINGEIGNDPV 180 Query: 151 KGKVIATMGL-----------YSVDMSQGFVRRENSGISPN---IPPTPLEDLSGVTVKR 196 G I +V+ + + +S + P P + +V + Sbjct: 181 NGTSIDKNRFETPVLLDKIKIRTVENPRHLDKEGDSFYADTPESGEPVPFDLKDEPSVLQ 240 Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 G+LE SN + + EM +MI + + + + + + + + I + Sbjct: 241 GYLEASNVSVVTEMVEMIEVNRSYEANQKTVQTQDSLLGKLINEV 285 >gi|119775448|ref|YP_928188.1| flagellar basal body rod protein FlgG [Shewanella amazonensis SB2B] gi|119767948|gb|ABM00519.1| flagellar basal-body rod protein FlgG [Shewanella amazonensis SB2B] Length = 262 Score = 163 bits (411), Expect = 3e-38, Method: Composition-based stats. Identities = 40/262 (15%), Positives = 92/262 (35%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + I A + ++ +++N++N TVG++ + F +++ N Sbjct: 1 MHPALWISKTGLDAQQTDIAVISNNVANASTVGYKKSRAVFEDLLYQTVNQAGGISASNT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + G+ ++T LD +EG +F ++ P TR+G+F Sbjct: 61 KLPNGLNIGAGTKVVATQKMFTQGNMLTTDNALDMMIEGPGFFEIQLPDGTTAYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE--KGEISQKGKVIATMGLYSVD 164 + D G +V+ Y + ++P K + + +++ + L Sbjct: 121 SLDDTGQIVTPGSGYVLQPAITIPDNATSITVSAEGEVSVKTPGAAESQIVGQLTLSDFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + +++G LE SN N E+ +I + Sbjct: 181 NPSGLDPIGQNLYLETGASGTPIQGTASLDGMGAIRQGALETSNVNVTEELVNLIESQRI 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I ++ + +N+ Sbjct: 241 YEMNSKVISAVDQMLAYVNQNL 262 >gi|127512281|ref|YP_001093478.1| flagellar basal body rod protein FlgG [Shewanella loihica PV-4] gi|126637576|gb|ABO23219.1| flagellar basal-body rod protein FlgG [Shewanella loihica PV-4] Length = 262 Score = 163 bits (411), Expect = 3e-38, Method: Composition-based stats. Identities = 41/262 (15%), Positives = 92/262 (35%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + I A + +S +++N++N TVG++ + F +++ N Sbjct: 1 MHPALWISKTGLDAQQTDISVISNNVANASTVGYKKSRAVFEDLLYQTVNQAGGISASNT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + G+ ++T LD +EG +F ++ P TR+G+F Sbjct: 61 KLPNGLNIGAGTKVVATQKMFTQGNMLTTDNSLDLMIEGPGFFEVQLPDGTTAYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE--KGEISQKGKVIATMGLYSVD 164 + D G +V+ Y + ++P K + + +V+ + + Sbjct: 121 TLDDTGQIVTPGSGYVLQPAITIPDDATSITVSAEGEVSVKTPGAAENQVVGQLSMSDFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + +++G LE SN N E+ +I + Sbjct: 181 NPSGLDPMGQNLYLETGASGTPIQGTASLDGMGAIRQGALETSNVNVTEELVNLIESQRI 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I ++ + +N+ Sbjct: 241 YEMNSKVISAVDQMLSYVNQNL 262 >gi|170744541|ref|YP_001773196.1| flagellar basal body rod protein [Methylobacterium sp. 4-46] gi|168198815|gb|ACA20762.1| flagellar basal body rod protein [Methylobacterium sp. 4-46] Length = 242 Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats. Identities = 78/243 (32%), Positives = 132/243 (54%), Gaps = 5/243 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 MQ + L+AQ+AL++RL TVA+N++N TVG+R + KF V + ++F + Sbjct: 1 MQNGLYVSLSAQVALQKRLDTVANNIANLATVGYRAEETKFEAVFDKARTG---PVAFAS 57 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 +G Y+S+ G I T LD A++GDAW +++ P + TRDGR + G L S SG Sbjct: 58 TGDTYISRLAGPTIKTDAPLDVAVQGDAWLSVQGPGGAPVYTRDGRMTMDASGQLRSVSG 117 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 P+LD PI + +G G I Q G ++ ++G++++D R ++ Sbjct: 118 -QPILDPGGAPILLDPNAGPPTIGRDGSIQQNGSLVGSLGVFTLDAKSRITRAGPGAVTS 176 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 N+P P++D + + V +G LE +N N + EM ++I + + F++ E + S+ AIR Sbjct: 177 NLPARPVQDFTKIGVVQGHLEGANVNPILEMTKLIAIQRAFDNAVATASEADSSLQSAIR 236 Query: 240 NIA 242 + Sbjct: 237 TLG 239 >gi|222084865|ref|YP_002543394.1| flagellar basal-body rod protein [Agrobacterium radiobacter K84] gi|221722313|gb|ACM25469.1| flagellar basal-body rod protein [Agrobacterium radiobacter K84] Length = 262 Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 92/261 (35%), Gaps = 21/261 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----------- 50 + I A + L +A+N++N +T G++ + +FS+++ + Sbjct: 1 MRALAIAATGMDAQQTNLEVIANNIANINTTGYKRSRAEFSDLLYQTERAKGIANRPNQA 60 Query: 51 ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + V + + G T +LD AL G WF ++ P TR G F Sbjct: 61 VVPEGANIGLGVQTTAVRNIQIQGELSQTSNDLDVALVGRGWFQIQMPDGTTAYTRAGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIP-QKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 +D G +V+ G + ++ V + V+ + + + Sbjct: 121 NKSDTGQMVTPDGNVLQPGITIPSNASNVVINQSGQVSATIGTATTPTVLGQLQIANFVN 180 Query: 166 SQGFVRRENSGI-SPNIPPTP----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ P + +K+G+LE SN + + E+ +I + + Sbjct: 181 EAGLQPMGSNLFTQTPASGDPVVSDPNENGFAYMKQGYLESSNVDPVKEITDLITAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + +I + +N+ Sbjct: 241 EMNSKVITTADDMAQIVSKNL 261 >gi|168335333|ref|ZP_02693429.1| hypothetical protein Epulo_09785 [Epulopiscium sp. 'N.t. morphotype B'] Length = 270 Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats. Identities = 55/266 (20%), Positives = 101/266 (37%), Gaps = 27/266 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ------ 54 M S + + + T+++N++N +TVGF+ V F ++ Q Sbjct: 1 MMRSLWTAATGMTSQQTHVDTISNNIANVNTVGFKQESVNFKTLLYQNMLPTQQEETTNP 60 Query: 55 ----KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT- 109 V G + G+ I T D A++G +FA+++ + TRDG FKVT Sbjct: 61 MLLQMGHGVRVGSISKNFGTGNLIQTNAPTDLAIDGTGFFAVQADNQVSYTRDGSFKVTT 120 Query: 110 ----------DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG 159 DG V ++ P+ +V + VG K + + IA + Sbjct: 121 TSDGVIALVTSDGHYVLSTDSEPITFDENVLSSQITINSYGGVGYKDSETGEDINIADIM 180 Query: 160 LYSVDMSQGFVRRENSGISPNI-PPTPLEDLSGVTV-----KRGFLEDSNANSMYEMGQM 213 + + G ++ PL + T+ + G+LE SN N EM + Sbjct: 181 VVQFANAAGLEATGDNLFVETAGSGVPLMESEXPTLTKSLLRAGYLEGSNVNIATEMVNL 240 Query: 214 IHLTQKFNSITTLIDENEKSMLEAIR 239 I + + + I + + +A++ Sbjct: 241 IVAQRAYELNSKAISTADTMLGQAVQ 266 >gi|240139802|ref|YP_002964279.1| flagellar basal-body rod protein flgF [Methylobacterium extorquens AM1] gi|240009776|gb|ACS41002.1| flagellar basal-body rod protein flgF [Methylobacterium extorquens AM1] Length = 246 Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats. Identities = 63/247 (25%), Positives = 118/247 (47%), Gaps = 9/247 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN-----DIDQK 55 MQ + +G++AQ AL + L +A+NM+N T GF+ +F E + + + D++ Sbjct: 1 MQNALFVGVSAQTALARELDVIANNMANVSTTGFKARSSRFQEYLMPVASADSFQRSDRR 60 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115 +S+V L G + AL GDA+ A+++P+G+ TR+G F++ G+LV Sbjct: 61 LSYVIDQGTPLDLTQGPVEPDSNPMHVALRGDAFLAVQTPQGLRYTRNGAFELDATGNLV 120 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 ++ G D PI I Q++ + G IS + + L + +Q + Sbjct: 121 TSDGHAVQGD--GGPITIGQQETGLAIAPDGTISTNLGIRGRLRLVTFANAQALKSEGAN 178 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 S P P + ++ G LE SN + EM +++ + + ++ ++++I + Sbjct: 179 LFSSEAPGRPAGPGAH--LEPGALERSNVKPVVEMTRLMDVNRTYSMVSSVISRLDDLRG 236 Query: 236 EAIRNIA 242 AIR +A Sbjct: 237 TAIRRLA 243 >gi|295688785|ref|YP_003592478.1| flagellar basal-body rod protein FlgF [Caulobacter segnis ATCC 21756] gi|295430688|gb|ADG09860.1| flagellar basal-body rod protein FlgF [Caulobacter segnis ATCC 21756] Length = 245 Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats. Identities = 64/244 (26%), Positives = 112/244 (45%), Gaps = 4/244 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTI--KVKFSEVVGAIKNDIDQKISF 58 M + +GL+ QL L + L VA+N++N +T GF+ V+ + A D + F Sbjct: 1 MDNALYVGLSRQLTLRRELDVVANNIANANTTGFKVEDLMVRTEQSKPAKTLDGSAPVKF 60 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSAS 118 V G+ TG + D A+EG +F +++ G TRDGRF +G LV+ S Sbjct: 61 VLDSGVARDFTQGAMTKTGGDFDLAIEGKGFFRVQTANGDRYTRDGRFTTNPEGQLVTQS 120 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178 G +PVLD PI I ++G+ G ++Q + + + D + ++ Sbjct: 121 G-HPVLDEGGGPINIDPTLGQVSIGKDGIVTQGAVRVGKIAVVRPDNLASMAKDGDNLY- 178 Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 N L+ V +G LE SN S+ E+ ++I + + + S+ ++D + A+ Sbjct: 179 RNTTNATLQPAPDAVVHQGMLEASNVQSVLEITKLIQVQRAYESVAKMMDNTSELSRTAV 238 Query: 239 RNIA 242 + Sbjct: 239 ERLG 242 >gi|21672606|ref|NP_660673.1| flagellar basal body rod protein FlgG [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|25008454|sp|Q8K9K4|FLGG_BUCAP RecName: Full=Flagellar basal-body rod protein flgG; AltName: Full=Distal rod protein gi|21623237|gb|AAM67884.1| flagellar basal-body rod protein FlgG [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 260 Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats. Identities = 45/259 (17%), Positives = 92/259 (35%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S I A + ++ +++N++N T GF+ + F +++ Sbjct: 1 MIPSLWISKTGLDAQQINMNVISNNLANVSTNGFKRSRAVFEDLMYQTMRQAGTNSSIDT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + V G+ T + D A+ G +F ++ P I TRDG F Sbjct: 61 TLPSGLQLGTGVRPVSTEKIYSQGNLSKTDSSKDVAINGPGFFQVQLPDGNIAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQI-PQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 ++ +G LV+ SG + ++ P I V + + I + L + Sbjct: 121 QLDQNGQLVTNSGYPIIPEINIPPNSINMNIGRDGIVSVTIQGQTQPISIGQLNLINFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + D + +G++E SN N E+ MI + + Sbjct: 181 HSGLESLGENLYQETQASGNPIDTTPGLNGTGLLYQGYVETSNVNVAEELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + I+ +++ + + + Sbjct: 241 EINSKSINTSDQMLQKLSQ 259 >gi|239826621|ref|YP_002949245.1| flagellar basal body rod protein FlgG [Geobacillus sp. WCH70] gi|239806914|gb|ACS23979.1| protein of unknown function DUF1078 domain protein [Geobacillus sp. WCH70] Length = 264 Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats. Identities = 48/261 (18%), Positives = 94/261 (36%), Gaps = 22/261 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G+ A + +L + +N++N +T GF+ + F ++V Sbjct: 1 MLRSMYSGIGAMRNFQTKLDVIGNNIANVNTYGFKKGRTIFKDLVSQQIAGASGPTANRG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRF 106 Q GS +TG LD A+ GD +F ++ + TR G F Sbjct: 61 GVNPKQVGLGSQLAAIDTVHTQGSLQTTGRPLDLAISGDGFFVLGDKNGGNHVYTRAGNF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---V 163 + DG++V+A G Y + + + + + + + G Sbjct: 121 YLDKDGNIVNADGLYLLGIGNKLINIPSSAESFSIGSDGTVNYIENGSLKSAGQIQLAKF 180 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQ 218 + + G + ++ + T+ G LE SN + E +MI + Sbjct: 181 NNNDGLEKAGDNLFRQTANSGTATTGAPGANGTGTIVAGTLEMSNVDLAEEFTEMIVAQR 240 Query: 219 KFNSITTLIDENEKSMLEAIR 239 F + T +I +++ + E + Sbjct: 241 GFQANTRIITTSDEILQELVN 261 >gi|113969608|ref|YP_733401.1| flagellar basal body rod protein FlgG [Shewanella sp. MR-4] gi|113884292|gb|ABI38344.1| flagellar basal-body rod protein FlgG [Shewanella sp. MR-4] Length = 262 Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats. Identities = 40/262 (15%), Positives = 93/262 (35%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + I A + ++ +++N++N TVG++ + F +++ N Sbjct: 1 MHPALWISKTGLDAQQTDIAVISNNVANASTVGYKKSRAVFEDLLYQTVNQAGGISASNT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + G+ ++T LD +EG +F ++ P TR+G+F Sbjct: 61 KLPNGLNIGAGTKVVATQKMFTQGNMLTTDNSLDLMIEGPGFFEVQLPDGTTAYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE--KGEISQKGKVIATMGLYSVD 164 + D G +V+ Y + ++P K + + +V+ + + Sbjct: 121 TLDDTGQIVTPGSGYVLQPAITIPDDATSITVSAEGEVSVKTPGTAENQVVGQLSMSDFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + + +++G LE SN N E+ +I + Sbjct: 181 NPSGLDPMGQNLYTETGASGTPIQGTASLDGMGAIRQGALETSNVNVTEELVNLIESQRI 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I ++ + +N+ Sbjct: 241 YEMNSKVISAVDQMLAYVNQNL 262 >gi|218531221|ref|YP_002422037.1| flagellar basal body rod protein FlgF [Methylobacterium chloromethanicum CM4] gi|218523524|gb|ACK84109.1| flagellar basal body rod protein [Methylobacterium chloromethanicum CM4] Length = 246 Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats. Identities = 63/247 (25%), Positives = 118/247 (47%), Gaps = 9/247 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN-----DIDQK 55 MQ + +G++AQ AL + L +A+NM+N T GF+ +F E + + + D++ Sbjct: 1 MQNALFVGVSAQTALARELDVIANNMANVSTTGFKARSARFQEYLMPVASADSFQRTDRR 60 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115 +S+V L G + AL GDA+ A+++P+G+ TR+G F++ G+LV Sbjct: 61 LSYVIDQGTPLDLTQGPVEPDSNPMHVALRGDAFLAVQTPQGLRYTRNGAFELDATGNLV 120 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 ++ G D PI I Q++ + G IS + + L + +Q + Sbjct: 121 TSDGHAVQGD--GGPITIGQQETGLAIAPDGTISTNLGIRGRLRLVTFANAQALKSEGAN 178 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 S P P + ++ G LE SN + EM +++ + + ++ ++++I + Sbjct: 179 LFSSEAPARPAGPGAH--LEPGALERSNVKPVVEMTRLMDVNRTYSMVSSVISRLDDLRG 236 Query: 236 EAIRNIA 242 AIR +A Sbjct: 237 TAIRRLA 243 >gi|15615012|ref|NP_243315.1| flagellar basal body rod protein FlgG [Bacillus halodurans C-125] gi|10175069|dbj|BAB06168.1| flagellar hook protein [Bacillus halodurans C-125] Length = 263 Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats. Identities = 49/261 (18%), Positives = 100/261 (38%), Gaps = 23/261 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ + +L + +N++N +T G++ + F ++V Sbjct: 1 MLRSMYSGISGMRNFQTKLDVIGNNIANVNTFGYKKGRTTFQDMVSQQLAGATAPGANRG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 Q + GS +T ELD + GD +F ++ TR G F Sbjct: 61 GVNPRQVGLGMQLASIDNVHTQGSLQNTNRELDLGISGDGFFQVQDGDTFYYTRSGNFYF 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG-----KVIATMGLYSV 163 G++V+A G ++D PI +P + F++G+ G ++ + + L + Sbjct: 121 DQQGTIVNAQG-LRLMDTNGNPITVPTTAQSFSIGQDGTVTYIDEDGDLQEAGMVRLVNF 179 Query: 164 DMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 +G + + + + + G LE SN + E +MI + Sbjct: 180 ANPEGLAKAGANLYLVSANSGAPLFTSAGNGGTGDIIAGTLEMSNVDLSEEFTEMIVAQR 239 Query: 219 KFNSITTLIDENEKSMLEAIR 239 F + T +I +++ + E + Sbjct: 240 GFQANTRIITTSDEILQELVN 260 >gi|148546709|ref|YP_001266811.1| flagellar basal body rod protein FlgG [Pseudomonas putida F1] gi|148510767|gb|ABQ77627.1| flagellar basal-body rod protein FlgG [Pseudomonas putida F1] Length = 261 Score = 162 bits (410), Expect = 4e-38, Method: Composition-based stats. Identities = 48/261 (18%), Positives = 96/261 (36%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + L+ +++N++N T GF+ + +F +++ IK Sbjct: 1 MLPALWVAKTGLSAQDTNLTVISNNLANVSTTGFKRDRAEFQDLLYQIKRQPGAQSTQDS 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 Q + V + + GS +T LD A+ G +F + P G + TRDG F Sbjct: 61 ELPSGLQVGTGVRIVGTQKNFQTGSLQTTENPLDMAVNGRGFFQILQPDGTVSYTRDGTF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 + DG +V+A G + Q + V + +VI + Sbjct: 121 HLNSDGQIVNADGLALEPAIVVPNDAQTFTVGQDGTVSITTAGNPAAQVIGNIQTADFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G N+ + T + LE+SN +++ E+ MI + + Sbjct: 181 PAGLQAMGNNLFLETAASGAPQVGTPGLNGFGTTLQQTLENSNVSTVEELVNMITTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + +I ++ + + + Sbjct: 241 EMNSKVISTADQMLSFVTQQL 261 >gi|85058013|ref|YP_453715.1| flagellar basal body rod protein FlgG [Sodalis glossinidius str. 'morsitans'] gi|84778533|dbj|BAE73310.1| flagellar basal-body rod protein FlgG [Sodalis glossinidius str. 'morsitans'] Length = 260 Score = 162 bits (410), Expect = 4e-38, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 84/259 (32%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + + +++N++N T+GF+ + F +++ Sbjct: 1 MMRSLMIAKTGLEAQQTNMDVISNNIANVSTMGFKRQQAVFEDLLYQTVRQPGAKSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V G +TG D A+EG + + P G TRDG Sbjct: 61 TIPSGLQLGTGVRPVATTRIHLQGGLTNTGNPTDVAIEGSGFLQVLMPDGTNAYTRDGSL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165 + G LV++SG + + + + + + L + Sbjct: 121 QRDQYGQLVTSSGYPIQPAVMIPNGASNLTISKDGLVSVALPGQTEPQEVGQLNLATFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + +K+ FLE+SN N E+ MI + + Sbjct: 181 DAGLQSLGENLYYETPSSGAPMENKPGMNGAGALKQQFLENSNVNVAQELITMIQAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + I +++ + + Sbjct: 241 ELNSKAISTSDQMLQRLAQ 259 >gi|42522133|ref|NP_967513.1| flagellar biosynthesisprotein [Bdellovibrio bacteriovorus HD100] gi|39574664|emb|CAE78506.1| Flagellar biosynthesisprotein [Bdellovibrio bacteriovorus HD100] Length = 271 Score = 162 bits (410), Expect = 4e-38, Method: Composition-based stats. Identities = 54/266 (20%), Positives = 106/266 (39%), Gaps = 25/266 (9%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK------------ 49 L+ +A +L T+A+N++N +T F+ + F E + A + Sbjct: 3 IKGVYTALSGAMAQSTKLDTIANNLANVNTPAFKRDQQLFQEYLTANEKMPETTQIPRDV 62 Query: 50 -------NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTR 102 N S+V + + G TG LD A++G +F + +P G+ LTR Sbjct: 63 AAIESFYNMQGGDKSYVDTKGTFTDFSQGGLKPTGNSLDVAIDGKGFFEIATPGGVKLTR 122 Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQI-----PQKDEIFNVGEKGEISQKGKVIAT 157 G F + G LV+ G + + + + + G++ + + + Sbjct: 123 SGNFTLDGSGQLVTKEGYPVLRQGEAGSDPAGRVIRFTGNGAVAIADNGDVYEGTENLGK 182 Query: 158 MGLYSVDMSQGFVRRENSGI-SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + L +V+ + +S +++++ ++K+GFLE SN N + EM MI Sbjct: 183 LSLVNVNNPDSLQKTGSSLYTFKPNIAPDMQNIANPSLKQGFLETSNVNIVQEMTDMIST 242 Query: 217 TQKFNSITTLIDENEKSMLEAIRNIA 242 + F S I ++ + I + Sbjct: 243 NRVFESTQKAISAYDQMADKMINVVG 268 >gi|33592481|ref|NP_880125.1| flagellar basal body rod protein FlgG [Bordetella pertussis Tohama I] gi|33572127|emb|CAE41669.1| flagellar basal-body rod protein FlgG [Bordetella pertussis Tohama I] gi|332381898|gb|AEE66745.1| flagellar basal body rod protein FlgG [Bordetella pertussis CS] Length = 261 Score = 162 bits (410), Expect = 4e-38, Method: Composition-based stats. Identities = 40/260 (15%), Positives = 89/260 (34%), Gaps = 21/260 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S + + + +++N++N T GF+ + F +++ Sbjct: 1 MMRSLWVAKTGLEGQQTSMDVISNNLANVQTNGFKWGRAVFQDLMYQTLRQPGAQVGDAN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q V G+ +TG E+D A++G + +E P G TRDG Sbjct: 61 QLPSGLQLGMGVQVAATQRVFSQGNMNNTGGEMDIAIQGRGFLQVELPDGTQAYTRDGSL 120 Query: 107 KVTDDGSLVSASGK--YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 +V +G L +A G P +++ + + + + + I + + + Sbjct: 121 QVDQNGQLTTAGGYVIQPPINVPDNALSLTIGKDGTVSVTQPGAAGTNVQIGQLQVATFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + P + + ++E SN N E+ MI + Sbjct: 181 NPTGLQSVGENLYLETDSSGPANLLQPGIDGAGQILQQYVETSNVNVAEELVNMITTQRA 240 Query: 220 FNSITTLIDENEKSMLEAIR 239 + + + +++ + + Sbjct: 241 YEMNSKAVKTSDEMLARLTQ 260 >gi|257095357|ref|YP_003168998.1| flagellar basal-body rod protein FlgG [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047881|gb|ACV37069.1| flagellar basal-body rod protein FlgG [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 260 Score = 162 bits (410), Expect = 4e-38, Method: Composition-based stats. Identities = 45/259 (17%), Positives = 89/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S A + ++ +A+N++N T GF+ + F++++ Sbjct: 1 MIRSLWTASTGLTAQQVQIDIIANNLANVSTNGFKQARGIFADLLYQTLRQPGAQSSQTT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q V GS TG LD A++G +F + P TRDG F Sbjct: 61 QIPDGLQIGLGVTPVSTGRIFTQGSLQQTGNALDMAIDGAGFFQVLLPDGTTAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-IATMGLYSVDM 165 + + G +V+A+G + + V + V I T+ + + Sbjct: 121 QKDNQGQIVTANGYPLQPAITIPAQALTVTVATDGVVSITLPTTTAPVQIGTIQVATFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 + G + + T V + ++E SN N E+ MI + + Sbjct: 181 NGGLQSVGENLYLETASSGTATPNTPGTNGSGVVVQNYVEASNVNVAQELVLMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 ++ +++ + + Sbjct: 241 ELNAKVVSTSDQMLARLTQ 259 >gi|313682110|ref|YP_004059848.1| flagellar basal-body rod protein flgg [Sulfuricurvum kujiense DSM 16994] gi|313154970|gb|ADR33648.1| flagellar basal-body rod protein FlgG [Sulfuricurvum kujiense DSM 16994] Length = 262 Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats. Identities = 42/257 (16%), Positives = 99/257 (38%), Gaps = 20/257 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S L+++ ++ T A+N++N +T+G++ + +F++++ + Sbjct: 1 MMQSLYTSSTGMLSMQTQIDTTANNIANVNTMGYKKSRAEFADLMYKVMTYAGTSTSDTT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 V GS T LD A+ G +F LE P + +R+G F Sbjct: 61 KSPTGIEVGLGVRPTSINKIFTEGSLKQTDNSLDLAITGKGFFKLELPNGTEVYSRNGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 K+ ++G++V++ G V ++ V + + + L S Sbjct: 121 KIDENGTIVNSDGYKLVPEVVIPEDATNISIGTDGIVSVTQSGQAQATQVGQISLTSFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ + + +++GF+E SN + E+ +I + + Sbjct: 181 PAGLHAMGDNLFVETDSSGQPIEGTPGENGIGNIRQGFVELSNVQLVVELTDLITGQRAY 240 Query: 221 NSITTLIDENEKSMLEA 237 ++ + +I +++ + Sbjct: 241 DANSKVITTSDEMLATT 257 >gi|238028847|ref|YP_002913078.1| flagellar basal body rod protein FlgG [Burkholderia glumae BGR1] gi|237878041|gb|ACR30374.1| Flagellar basal-body rod protein [Burkholderia glumae BGR1] Length = 262 Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 89/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + ++ +++N++N T GF+ + F +++ Sbjct: 1 MNRSLYIAATGMNAQQAQMDVISNNLANVSTNGFKGSRAVFEDLLYQTVRQPGANSTQQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+ TG D A+ G +F + P TRDG F Sbjct: 61 ELPSGLQLGTGVQQVATERLYTQGNLQQTGNSRDVAINGQGFFQVLMPDGTTAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 + + G LV+++G + + V S I +M L + Sbjct: 121 QANNQGQLVTSAGYQVLPAITVPQNAQSLTIGADGVVTVTQPGSTNAVQIGSMQLATFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 +G + + ++ +G++E SN N + E+ MI + + Sbjct: 181 PEGLNALGQNLFAETTSSGAPNVTTPGLNGAGSLNQGYVESSNVNVVQELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + Sbjct: 241 EINSKAVTTSDQMLQTVTQ 259 >gi|163802601|ref|ZP_02196493.1| polar flagellar FlgG [Vibrio sp. AND4] gi|159173684|gb|EDP58503.1| polar flagellar FlgG [Vibrio sp. AND4] Length = 262 Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats. Identities = 47/262 (17%), Positives = 94/262 (35%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + + A + ++T+++N++N TVGF+ + F ++ N + Sbjct: 1 MHPALWVSKTGLDAQQTNIATISNNLANASTVGFKKSRAVFEDLFYQNINQPGGQSSQNT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + G+ +T LD +EGD +F + P I TR+G+F Sbjct: 61 ELPSGLMLGAGSKVVATQKVHTHGNAQTTTNALDMMVEGDGFFQVTLPDGNIGYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD--EIFNVGEKGEISQKGKVIATMGLYSVD 164 + +G+LV++ Y V +P V + Q V+ + + Sbjct: 121 TLDGEGTLVTSGSGYAVEPEIVIPEDAISITVGTDGEVSVRVRGEQNNVVVGQLTITDFV 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + P ++ +++ LE SN N E+ MI + Sbjct: 181 NPGGLEPIGQNLYLPTGASGDPQEGVPGLDGLGEIRQSMLEASNVNVTEELVNMIEAQRV 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I +K M + + Sbjct: 241 YEMNSKVISSVDKMMSFINQQL 262 >gi|89069818|ref|ZP_01157153.1| flagellar basal-body rod protein FlgG [Oceanicola granulosus HTCC2516] gi|89044619|gb|EAR50735.1| flagellar basal-body rod protein FlgG [Oceanicola granulosus HTCC2516] Length = 261 Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 96/259 (37%), Gaps = 21/259 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + I A + R+ +++N++N +T G+ + +F+++ Sbjct: 1 MRALKIAATGMSAQQMRVEVISNNLANMNTTGYNARRAEFADLHYQQMMRPGTINASDGT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q V + GS STG +LD A+EG + + P TRDG Sbjct: 61 VLPTGVQLGLGVRPTSVSMMLAQGSLSSTGGDLDIAIEGSGYLEVALPDGRPGYTRDGGL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 K + DG +V+A G ++ + V + +++ + Sbjct: 121 KRSGDGLIVTADGFPVAPEITIPRDALSISINPEGEVYAYFSDRVEAQLLGQFDIAGFSN 180 Query: 166 SQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 +G ++ P T+++GFLEDS+ +++ E+ +I + + Sbjct: 181 PRGLEAVGSNLFVETEASGPANVTTPGQDGLGTLRQGFLEDSSVDAVKEVTDLIEAQRGY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + +I ++ + ++ Sbjct: 241 ELNSKVISAADQMLGATVQ 259 >gi|329888226|ref|ZP_08266824.1| flagellar basal-body rod protein FlgG [Brevundimonas diminuta ATCC 11568] gi|328846782|gb|EGF96344.1| flagellar basal-body rod protein FlgG [Brevundimonas diminuta ATCC 11568] Length = 262 Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 95/254 (37%), Gaps = 21/254 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + A + + +++N++N +TVGF+ + +F +++ + Sbjct: 1 MRALRTAATGMAAQQLNVEVISNNIANMNTVGFKRQRAEFQDLLYQNVERMGAQSSSQGT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q S V +G Y E GS TG D A++G +F + P G TR G F Sbjct: 61 VVPTGIQIGSGVKAGSVYRITEQGSPNRTGNTYDIAIQGKGYFQITLPSGELAYTRAGNF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 V +G LV+ G +A + + V + +V+ + L + Sbjct: 121 TVNGEGQLVTDDGYAVEPAIAIPQDALDVSISKSGQVQVTTAGQTEPQVVGQLELATFFN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVTV-----KRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ + P + V + + E SN +++ E+ +I + + Sbjct: 181 EAGLEAIGDNLLLETAASGPATVGAPGEVGYGNLLQHYTEASNVDAVSEITALIVAQRAY 240 Query: 221 NSITTLIDENEKSM 234 + +I ++ + Sbjct: 241 EMNSKVITTADEML 254 >gi|291617022|ref|YP_003519764.1| FlgG [Pantoea ananatis LMG 20103] gi|291152052|gb|ADD76636.1| FlgG [Pantoea ananatis LMG 20103] gi|327393473|dbj|BAK10895.1| flagellar basal-body rod protein FlgG [Pantoea ananatis AJ13355] Length = 260 Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 87/259 (33%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S I A + + +A+N++N T GF+ + F +++ + Sbjct: 1 MIRSLWIAKTGLDAQQMNMDVIANNLANVSTNGFKRSRAVFEDLMYQTMRQPGTQSSEQT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 + V G+ T D A+ G +F ++ P G TRDG F Sbjct: 61 TLPSGLQIGTGVRPVTTERLHTQGNLSQTNNSKDIAINGQGFFQIQMPDGTSAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V +G LV+ SG + V + + + + L + Sbjct: 121 QVDQNGQLVTNSGFPVQPGITIPANATSITVSRDGVVSVTQQGQTQAAQVGQLTLSTFMN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 + G + D + + +G+ E SN N E+ MI + + Sbjct: 181 NAGLDSVGENLYKETQASGAPTDSTPGQNGAGLLYQGYAETSNVNVAEELVTMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + I +++ + + + Sbjct: 241 EINSKAISTSDQMLAKLTQ 259 >gi|158422258|ref|YP_001523550.1| flagellar basal body rod protein FlgG [Azorhizobium caulinodans ORS 571] gi|158329147|dbj|BAF86632.1| flagellar basal-body rod FlgG protein [Azorhizobium caulinodans ORS 571] Length = 262 Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats. Identities = 42/253 (16%), Positives = 90/253 (35%), Gaps = 21/253 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----------- 50 + I A + + +A+N++N +T GF+ + +FS+++ + Sbjct: 1 MRALAIAATGMNAQQTNVEVIANNIANINTTGFKRARAEFSDLLYQSERTQGIPNRDGGQ 60 Query: 51 ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + V + G TG LD A+ G F + +P + TR G F Sbjct: 61 AIPEGAMLGLGVRTVGIRNLHTQGPLTQTGNTLDLAVNGRGMFEITTPDGQTVYTRAGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIP-QKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 + G LV++ G + Q +E V +++ + L + Sbjct: 121 NRSATGQLVTSDGYVINPAIQFPNNATEIQVNESGQVYATIPNQTNPQLLGQLTLVNFAN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G N+ + +++G+LE SN + + E+ ++I + + Sbjct: 181 ESGMEPLGNNLYRETLASGQPIVGVAGDVGFGKIQQGYLEASNVDPVKEITELIAAQRSY 240 Query: 221 NSITTLIDENEKS 233 + +I ++ Sbjct: 241 EMNSKVIQAADEM 253 >gi|315648129|ref|ZP_07901230.1| fagellar hook-basal body protein [Paenibacillus vortex V453] gi|315276775|gb|EFU40118.1| fagellar hook-basal body protein [Paenibacillus vortex V453] Length = 274 Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats. Identities = 58/272 (21%), Positives = 109/272 (40%), Gaps = 34/272 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ + +L + +N++N +TVGF+ +V F +++ + + Sbjct: 1 MLRSMYSGISGMRGFQTKLDVIGNNIANVNTVGFKAGRVMFKDILSQTMSGVTPGTDDPS 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI---ILTRDG 104 Q V+ G GS ++T D ++GD +F ++ LTR G Sbjct: 61 GGVNAKQIGLGVSIGSIDTMHTPGSAMTTHNPTDLRIDGDGFFMVKLSEDQEVPFLTRAG 120 Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQK-----GKVIATMG 159 F V +LV++ G VLD A PIQ+ F + + G I QK + A +G Sbjct: 121 DFHVDVARNLVTSDG-MLVLDSAGDPIQLGDDVTAFTIAQNGAIIQKLSDGTTEAGAIIG 179 Query: 160 LYSVDMSQGFVRRENSGISPNIPPTP------------LEDLSGVTVKRGFLEDSNANSM 207 + + +G + + + P + + G LE SN + Sbjct: 180 VAKIPNPEGLEKIGGNMYRVTLNAVPDGDVAAVMFEGNDAEEGTGAIIAGQLEMSNVDLT 239 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E +MI + F + + +I +++ + E + Sbjct: 240 SEFSEMIVAQRGFQANSRIITTSDEVLQEVVN 271 >gi|28897555|ref|NP_797160.1| flagellar basal body rod protein FlgG [Vibrio parahaemolyticus RIMD 2210633] gi|91225875|ref|ZP_01260844.1| polar flagellar FlgG [Vibrio alginolyticus 12G01] gi|153839683|ref|ZP_01992350.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus AQ3810] gi|254230138|ref|ZP_04923533.1| flagellar basal-body rod protein FlgG [Vibrio sp. Ex25] gi|260364613|ref|ZP_05777215.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus K5030] gi|260878282|ref|ZP_05890637.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus AN-5034] gi|260898112|ref|ZP_05906608.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus Peru-466] gi|260901956|ref|ZP_05910351.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus AQ4037] gi|262394937|ref|YP_003286791.1| flagellar basal-body rod protein FlgG [Vibrio sp. Ex25] gi|269965422|ref|ZP_06179541.1| flagellar basal-body rod protein FlgG [Vibrio alginolyticus 40B] gi|5361010|gb|AAD42917.1|U12817_11 polar flagellar FlgG homolog [Vibrio parahaemolyticus] gi|28805767|dbj|BAC59044.1| polar flagellar FlgG [Vibrio parahaemolyticus RIMD 2210633] gi|91189525|gb|EAS75801.1| polar flagellar FlgG [Vibrio alginolyticus 12G01] gi|149746793|gb|EDM57781.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus AQ3810] gi|151937331|gb|EDN56194.1| flagellar basal-body rod protein FlgG [Vibrio sp. Ex25] gi|262338531|gb|ACY52326.1| flagellar basal-body rod protein FlgG [Vibrio sp. Ex25] gi|269829901|gb|EEZ84131.1| flagellar basal-body rod protein FlgG [Vibrio alginolyticus 40B] gi|308086113|gb|EFO35808.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus Peru-466] gi|308090170|gb|EFO39865.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus AN-5034] gi|308106768|gb|EFO44308.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus AQ4037] gi|308115105|gb|EFO52645.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus K5030] gi|328473451|gb|EGF44299.1| flagellar basal body rod protein FlgG [Vibrio parahaemolyticus 10329] Length = 262 Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats. Identities = 47/262 (17%), Positives = 96/262 (36%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + + A + ++T+++N++N TVG++ + F ++ N + Sbjct: 1 MHPALWVSKTGLDAQQTNIATISNNLANASTVGYKKSRAVFEDLFYQNINQPGGQSSQNT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + G+ +T LD +EGD +F + P I TR+G+F Sbjct: 61 ELPSGLMLGAGSKVVATQKVHTHGNAQTTTNALDMMVEGDGFFQVTLPDGNIGYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD--EIFNVGEKGEISQKGKVIATMGLYSVD 164 + +G+LV++ YPV +P V + Q +V+ + + Sbjct: 121 TLNGEGTLVTSGSGYPVEPEIVIPEDAISITVGTDGEVSVRVRGQQDNQVVGQLTITDFV 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + P ++ +++ LE SN N E+ MI + Sbjct: 181 NPGGLEPIGQNLYLPTGASGDPQEGVPGLDGLGEIRQSMLEASNVNVTEELVNMIEAQRV 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I +K M + + Sbjct: 241 YEMNSKVISSVDKMMSFVNQQL 262 >gi|114046840|ref|YP_737390.1| flagellar basal body rod protein FlgG [Shewanella sp. MR-7] gi|113888282|gb|ABI42333.1| flagellar basal-body rod protein FlgG [Shewanella sp. MR-7] Length = 262 Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats. Identities = 40/262 (15%), Positives = 93/262 (35%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + I A + ++ +++N++N TVG++ + F +++ N Sbjct: 1 MHPALWISKTGLDAQQTDIAVISNNVANASTVGYKKSRAVFEDLLYQTVNQAGGISASNT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + G+ ++T LD +EG +F ++ P TR+G+F Sbjct: 61 KLPNGLNIGAGTKVVATQKMFTQGNMLTTDNSLDLMIEGPGFFEVQLPDGTTAYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE--KGEISQKGKVIATMGLYSVD 164 + D G +V+ Y + ++P K + + +V+ + + Sbjct: 121 TLDDTGQIVTPGSGYVLQPAITIPEDATSITVSAEGEVSVKTPGAAENQVVGQLSMSDFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + + +++G LE SN N E+ +I + Sbjct: 181 NPSGLDPMGQNLYTETGASGTPIQGTASLDGMGAIRQGALETSNVNVTEELVNLIESQRI 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I ++ + +N+ Sbjct: 241 YEMNSKVISAVDQMLAYVNQNL 262 >gi|117919774|ref|YP_868966.1| flagellar basal body rod protein FlgG [Shewanella sp. ANA-3] gi|117612106|gb|ABK47560.1| flagellar basal-body rod protein FlgG [Shewanella sp. ANA-3] Length = 262 Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats. Identities = 40/262 (15%), Positives = 93/262 (35%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + I A + ++ +++N++N TVG++ + F +++ N Sbjct: 1 MHPALWISKTGLDAQQTDIAVISNNVANASTVGYKKSRAVFEDLLYQTVNQAGGISASNT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + G+ ++T LD +EG +F ++ P TR+G+F Sbjct: 61 KLPNGLNIGAGTKVVATQKMFTQGNMLTTDNSLDLMIEGPGFFEVQLPDGTTAYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE--KGEISQKGKVIATMGLYSVD 164 + D G +V+ Y + ++P K + + +V+ + + Sbjct: 121 TLDDTGQIVTPGSGYVLQPAITIPEDATSITVSAEGEVSVKTPGAAENQVVGQLSMTDFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + + +++G LE SN N E+ +I + Sbjct: 181 NPSGLDPMGQNLYTETGASGTPIQGTASLDGMGAIRQGALETSNVNVTEELVNLIESQRI 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I ++ + +N+ Sbjct: 241 YEMNSKVISAVDQMLAYVNQNL 262 >gi|258621051|ref|ZP_05716085.1| flagellar basal-body rod protein FlgG [Vibrio mimicus VM573] gi|258625279|ref|ZP_05720187.1| flagellar basal-body rod protein FlgG [Vibrio mimicus VM603] gi|262166280|ref|ZP_06034017.1| flagellar basal-body rod protein FlgG [Vibrio mimicus VM223] gi|262170827|ref|ZP_06038505.1| flagellar basal-body rod protein FlgG [Vibrio mimicus MB-451] gi|258582452|gb|EEW07293.1| flagellar basal-body rod protein FlgG [Vibrio mimicus VM603] gi|258586439|gb|EEW11154.1| flagellar basal-body rod protein FlgG [Vibrio mimicus VM573] gi|261891903|gb|EEY37889.1| flagellar basal-body rod protein FlgG [Vibrio mimicus MB-451] gi|262025996|gb|EEY44664.1| flagellar basal-body rod protein FlgG [Vibrio mimicus VM223] Length = 262 Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats. Identities = 47/262 (17%), Positives = 96/262 (36%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 MQ + + A + ++T+++N++N TVGF+ + F ++ N + Sbjct: 1 MQPALWVSKTGLDAQQTNIATISNNLANASTVGFKKGRAVFEDLFYQNINQPGAQSSQNT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + G+ +T LD +EGD +F + P I +R+G+F Sbjct: 61 RLPSGLMLGAGSKVVATQKVHTHGNAQTTSNSLDMMIEGDGFFQILMPDGNIAYSRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD--EIFNVGEKGEISQKGKVIATMGLYSVD 164 + D+G++V++ Y + +P V + Q +V+ + Sbjct: 121 TLDDEGAIVTSGSGYRLQPEIVIPEDAISITIGNDGEVSVRVRGQQDNQVLGQITTVDFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + P ++ V++ LE SN N E+ MI + Sbjct: 181 NPGGLEPIGQNLYLPTGASGEPQEGVPGLDGLGDVRQSMLETSNVNVTEELVNMIEAQRV 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I +K M + + Sbjct: 241 YEMNSKVISAVDKMMSFVNQQL 262 >gi|260768780|ref|ZP_05877714.1| flagellar basal-body rod protein FlgG [Vibrio furnissii CIP 102972] gi|260616810|gb|EEX41995.1| flagellar basal-body rod protein FlgG [Vibrio furnissii CIP 102972] gi|315180483|gb|ADT87397.1| hypothetical flagellar basal-body rod protein [Vibrio furnissii NCTC 11218] Length = 261 Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats. Identities = 46/260 (17%), Positives = 100/260 (38%), Gaps = 20/260 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + I A + +++ +++N++N +TVGF+ +V F ++ +++ Sbjct: 1 MHNALMISKTGMAAQDAKMTAISNNLANVNTVGFKRDRVVFEDLFYSVEKQAGTGTNDLN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 Q + V G+ +T + D A+ GD +F +E P G + TR+G+F Sbjct: 61 IHPTGVQLGNGVRVAGTEKVFTQGNINNTSQQFDLAIVGDGFFQIEGPEGEVLYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 + DG++V+ G ++ + E V + + + + L Sbjct: 121 HLNADGAIVNTQGYLLQPEINVPDNATLVTITEDGQVSAVVSGQVEPEQLGEITLVKFMN 180 Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + ++ + +K+G LE SN + EM MI + + Sbjct: 181 PSGLTAKGANLLAETEASGEAMELVAGTDGAGVIKQGALETSNVQVVEEMVDMISTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRN 240 ++ ++ + N Sbjct: 241 EMSAKMVSAADQMLQYIANN 260 >gi|1086561|gb|AAB68968.1| FlgG [Agrobacterium tumefaciens] gi|2459714|gb|AAB71790.1| FlgG [Agrobacterium tumefaciens] Length = 262 Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats. Identities = 44/261 (16%), Positives = 93/261 (35%), Gaps = 21/261 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----------- 50 + I A + L +A+N++N +T G++ + +F++++ + Sbjct: 1 MRALAIAATGMDAQQTNLEVIANNIANINTTGYKRARAEFTDLLYQTERMQGVPNRANQA 60 Query: 51 ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRF 106 + V + G+ I TG +LD A+ G WF R L R G F Sbjct: 61 IVPEGANIGLGVQTSAVRNIHTQGNLIETGNKLDVAIIGQGWFPDRGRRWFDALQRAGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 DG+LV+ G + ++ V + + + + + + Sbjct: 121 NKNADGNLVTVDGYNVIPNINIPTDAQDITITRTGQVTARIGNAADFTQLGQLTIANFAN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ S S VK+ +LE SN +++ E+ +I + + Sbjct: 181 EAGLKPLGDNLFSQTPASGAPVVGVPDDPSYGYVKQSYLEGSNVDAVKEITDLITAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + +I ++ +N+ Sbjct: 241 EMNSKVITTADEMASIVSKNL 261 >gi|218887603|ref|YP_002436924.1| hypothetical protein DvMF_2517 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758557|gb|ACL09456.1| protein of unknown function DUF1078 domain protein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 259 Score = 162 bits (409), Expect = 5e-38, Method: Composition-based stats. Identities = 55/259 (21%), Positives = 103/259 (39%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-------- 52 MQ L L E R++ +++N++N +T G++ + F + + +D Sbjct: 1 MQEGMLSSLFGALTNEHRMNNISNNLANVNTTGYKRDVISFKDTMQLFAHDQIMEPIANV 60 Query: 53 --------DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDG 104 ++ + E GS TG LD A+ G+A+F + +P G TR+G Sbjct: 61 RSKKLFPEPMHVARPRIAVAHTDFEQGSMRYTGNPLDVAISGNAFFKVRTPEGEFYTRNG 120 Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 F T DG LV+A G D + + E + + G+I G ++ + + +V+ Sbjct: 121 NFIQTADGQLVTAMGHAVQGDGGDIAL---PPGEAVQISDDGQIFAGGALVGQLNMVTVN 177 Query: 165 MSQGFVRRENSGIS-PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223 + + V +G+LE SN + EM MI ++F + Sbjct: 178 DLTALEKLGGNMYRLRPGSNAGEVPAERAYVAQGYLEASNVEVVSEMVNMIEAQRQFEAY 237 Query: 224 TTLIDENEKSMLEAIRNIA 242 ++ + EA + + Sbjct: 238 QKVMQTTDSIDREATQKVG 256 >gi|222530299|ref|YP_002574181.1| flagellar basal body rod protein [Caldicellulosiruptor bescii DSM 6725] gi|222457146|gb|ACM61408.1| flagellar basal body rod protein [Caldicellulosiruptor bescii DSM 6725] Length = 255 Score = 162 bits (409), Expect = 5e-38, Method: Composition-based stats. Identities = 51/258 (19%), Positives = 102/258 (39%), Gaps = 21/258 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS-----------EVVGAIK 49 M + + ++ + A+N++N T GF+ + + V + Sbjct: 1 MIRGIYTSASGMILNQKLMDITANNVANVSTTGFKRDVAQVESFRNMLVYRIYDKVSSPD 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP-----RGIILTRDG 104 N I + G +I T L+ A++GD +F +E P + I TR+G Sbjct: 61 NAIGYMSLGADVSRIVSDFSQGLYIKTDEPLNLAIKGDGFFTIEVPENQGAQQIFYTRNG 120 Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 F + G LV+ +G Y + + Q + E+G + Q G+++ + + Sbjct: 121 AFTLNSRGELVTLNGFYVLG---QNGRIVLQNGGQVRIDEQGNVYQNGRIVDRLRVVDFQ 177 Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224 + N+ + + V +G+LE SN NS+ EM MI + + + + Sbjct: 178 DKSLLRKVGNNLFEADAAVQQIPFS--GKVLQGYLEGSNVNSVQEMVNMISVLRAYEANQ 235 Query: 225 TLIDENEKSMLEAIRNIA 242 ++++ +A+ IA Sbjct: 236 KAFVIQDETLQKAVNEIA 253 >gi|292487941|ref|YP_003530816.1| flagellar basal-body rod protein FlgG [Erwinia amylovora CFBP1430] gi|292899160|ref|YP_003538529.1| flagellar basal-body rod protein FlgG [Erwinia amylovora ATCC 49946] gi|291199008|emb|CBJ46119.1| flagellar basal-body rod protein FlgG (distal rod protein) [Erwinia amylovora ATCC 49946] gi|291553363|emb|CBA20408.1| Flagellar basal-body rod protein flgG [Erwinia amylovora CFBP1430] gi|312172062|emb|CBX80319.1| Flagellar basal-body rod protein flgG [Erwinia amylovora ATCC BAA-2158] Length = 260 Score = 162 bits (409), Expect = 5e-38, Method: Composition-based stats. Identities = 41/259 (15%), Positives = 87/259 (33%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + + +A+N++N T GF+ + F +++ Sbjct: 1 MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLMYQTMRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + G+ T + D A+ G +F+++ P TRDG F Sbjct: 61 TLPSGLQIGTGTRPVATERLHNQGNLSQTDSSKDVAINGQGFFSVQMPDGTTAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQI-PQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 + +G LV+ +G + + V + + + L + Sbjct: 121 QTDQNGQLVTNAGFPVQPAIVIPANSLSMTVSRDGVVSVTQQGQANPVQVGQLTLSTFMN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + T+ +G++E SN N E+ MI + + Sbjct: 181 DAGLSSMGENLYQETQASGVPNESNPGNNGAGTLYQGYVETSNVNVAEELVSMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + I +++ + + + Sbjct: 241 EINSKAISTSDQMLAKLTQ 259 >gi|116626490|ref|YP_828646.1| flagellar basal-body rod protein FlgG [Candidatus Solibacter usitatus Ellin6076] gi|116229652|gb|ABJ88361.1| flagellar basal-body rod protein FlgG [Candidatus Solibacter usitatus Ellin6076] Length = 263 Score = 162 bits (409), Expect = 5e-38, Method: Composition-based stats. Identities = 41/262 (15%), Positives = 87/262 (33%), Gaps = 22/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + + +A N++N +T G++ + +F +++ Sbjct: 1 MIRALYSAASGMTAQQLNVDNIAHNLANANTAGYKMRRAQFQDLIYQTVVQPGSASGQQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + + GSF T LD ++G +F + P G TR G F Sbjct: 61 TVPTGLQVGLGTRTSSNEILFTQGSFAQTDNPLDLVIQGKGFFQVRQPSGQLAYTRSGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 DG++V+ G + + V + + L + Sbjct: 121 HCDRDGNIVTQDGNTLEPQITVPAAAQQISIAQDGTVSYTLPNQSAAQQAGQIQLANFQN 180 Query: 166 SQGFVRRENSGISPNIP------PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + P TP +V +G+ E SN + + E +I + Sbjct: 181 PAGLNSVGGNLYLPTDASGDATVGTPGGQEGLGSVLQGYTEQSNVSVVEEFINLIVAQRG 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + + ++ + + + N+ Sbjct: 241 YEANSKVVKAADDMYQQ-VNNL 261 >gi|157961173|ref|YP_001501207.1| flagellar basal body rod protein FlgG [Shewanella pealeana ATCC 700345] gi|157846173|gb|ABV86672.1| flagellar basal-body rod protein FlgG [Shewanella pealeana ATCC 700345] Length = 262 Score = 162 bits (409), Expect = 5e-38, Method: Composition-based stats. Identities = 44/262 (16%), Positives = 91/262 (34%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + I A + +S +++N++N TVGF+ + F +++ N Sbjct: 1 MHPALWISKTGLDAQQTDISVISNNVANASTVGFKKSRAVFEDLLYQNVNQAGGISASNT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 S G+ ++T LD +EG +F ++ P G TR+G+F Sbjct: 61 KLPNGLSIGSGTKVVATQEIFTQGNMLTTDNSLDLLVEGPGFFEVQLPDGTAAYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQK--GKVIATMGLYSVD 164 + D G +V+ Y V ++P + +V+ + + Sbjct: 121 SLDDTGQIVTPGSGYVVQPAITIPEDATSITVSAEGEVSVKTPGNAENQVVGQLAISDFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + +++G LE SN N E+ +I + Sbjct: 181 NPSGLDPMGQNLYMETGASGTPIQGTASLDGMGAIRQGALETSNVNVTEELVNLIESQRI 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I ++ + +N+ Sbjct: 241 YEMNSKVISAVDQMLSYVNQNL 262 >gi|238752865|ref|ZP_04614330.1| Lateral flagellar rod protein (FlgG-like) [Yersinia rohdei ATCC 43380] gi|238708904|gb|EEQ01157.1| Lateral flagellar rod protein (FlgG-like) [Yersinia rohdei ATCC 43380] Length = 261 Score = 162 bits (409), Expect = 5e-38, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 89/261 (34%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + + A + +++ +++N++N +T GF+ +V F ++ + Sbjct: 1 MNPALWVSKTGLAAQDAKMNAISNNLANVNTDGFKRDRVVFEDLFYQNQRTPGTPLDQNN 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106 S V VG+ T ELD A+ G +F +E+ G+ TR G Sbjct: 61 ATPNGIQLGSGVKVVGTQKQFTVGNIKVTKGELDVAIAGKGFFQIETSDGGLAYTRAGNL 120 Query: 107 KVTDDGSLVSASGKY-PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 + DG LV+A G + V + + + + L Sbjct: 121 AINADGVLVNAQGMPLIPQIELPAGSSNLAIGKDGTVTAQVGGESEPAELGQITLVDFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + ++ G LE SN + EM MI + + + Sbjct: 181 PAGLEAVGGNMYKETVASGTAVEGVPGEEAFGQLEHGSLEGSNVQVVEEMVDMITVQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 ++ + + + + Sbjct: 241 EMNAKMVSAADDMLKFVTQKL 261 >gi|167628970|ref|YP_001679469.1| flagellar basal-body rod protein, putative [Heliobacterium modesticaldum Ice1] gi|167591710|gb|ABZ83458.1| flagellar basal-body rod protein, putative [Heliobacterium modesticaldum Ice1] Length = 267 Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats. Identities = 43/265 (16%), Positives = 88/265 (33%), Gaps = 23/265 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS---EVVGAIKND------ 51 M + L + A+N++N +TV F+ + F E++ +D Sbjct: 1 MIRGLYTSASGMLVQQTNQDVTANNLANVNTVSFKKDRAVFRGFPEMLIRRMHDFSPAEP 60 Query: 52 --------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTR 102 I + + + T D A+ G +F + P TR Sbjct: 61 GQAEKNPLIGRIGTGAVVDAIWTDPTSAGLRVTQNPTDLAIIGRGYFVVMGPDGEERYTR 120 Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162 +G+F + DG+LV+ G ++ I I + G + + +G Sbjct: 121 NGQFSLRADGTLVTTEGFAVQGTAGAIRIPQGGNLRIDSDGRIFSGDTEVAQLRIVGYDE 180 Query: 163 VDMSQGFVRRENSGISP-----NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217 + + + + + ++ G LE +N N + EM QMI Sbjct: 181 TPGQAPPLVKAGDSLYRLNEQGDGGGVRDLAIGEREIRSGALELANVNVVQEMVQMISAA 240 Query: 218 QKFNSITTLIDENEKSMLEAIRNIA 242 + + + I + ++ +A + Sbjct: 241 RAYEANQKAIQSQDGTLEKACTELG 265 >gi|302874613|ref|YP_003843246.1| fagellar hook-basal body protein [Clostridium cellulovorans 743B] gi|307690776|ref|ZP_07633222.1| flagellar basal body rod protein FlgG [Clostridium cellulovorans 743B] gi|302577470|gb|ADL51482.1| fagellar hook-basal body protein [Clostridium cellulovorans 743B] Length = 254 Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats. Identities = 51/256 (19%), Positives = 113/256 (44%), Gaps = 17/256 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVV----------GA 47 M + L+ ++ E R++++++N++N +TVG+++ + F +V+ Sbjct: 1 MIRALYTSLSGMISKEARMNSISNNLANANTVGYKSDDLILKSFDQVLLENRGKKNGEAH 60 Query: 48 IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107 ++N++ V + Y G+ ST ++ D A+ GD +F +E TRDG F Sbjct: 61 VRNELGGLSLGVELDETYTDYNQGTLESTDSQTDLAILGDGFFTVERNGNKFYTRDGNFS 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 V G +V++ G Y + + + K ++ + G + KV + + Sbjct: 121 VDPQGYMVNSKGDYLLGNNGNRIYVANGKIDVKDNGVLTVDNGNTKVAYNLDVVDFADKN 180 Query: 168 GFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 VR ++ + VK+ LE SN N + M +M+ + ++F + +I Sbjct: 181 TLVRNGDNLY----SGGNPTAATKFNVKQRALEKSNVNVVNGMIEMMSVYREFETNQKVI 236 Query: 228 DENEKSMLEAIRNIAS 243 ++++ +++ + S Sbjct: 237 QTLDETLGKSVNQLGS 252 >gi|260767767|ref|ZP_05876702.1| flagellar basal-body rod protein FlgG [Vibrio furnissii CIP 102972] gi|260617276|gb|EEX42460.1| flagellar basal-body rod protein FlgG [Vibrio furnissii CIP 102972] gi|315179401|gb|ADT86315.1| flagellar basal body rod protein FlgG [Vibrio furnissii NCTC 11218] Length = 262 Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats. Identities = 48/262 (18%), Positives = 96/262 (36%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 MQ + + A + ++T+++N++N TVGF+ + F ++ N + Sbjct: 1 MQPALWVSKTGLDAQQTNIATISNNLANASTVGFKKSRAVFEDLFYQNINQPGGQSSQNT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + G+ +T LD +EGD +F + P I +R+G+F Sbjct: 61 ELPSGLMLGAGSKVVATQKVHTHGNAQTTTNSLDMMIEGDGFFQILMPDGNIGYSRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD--EIFNVGEKGEISQKGKVIATMGLYSVD 164 + D+G +V++ YP+ +P V + Q +V+ + Sbjct: 121 TLNDEGVIVTSGSGYPLQPEIVIPDDAISITVGNDGEVSVRVRGQQDNQVLGQITTVDFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + P ++ V++ LE SN N E+ MI + Sbjct: 181 NPGGLEPIGQNLYLPTGASGDPQEGVPGLDGLGNVRQSMLESSNVNVTEELVNMIEAQRV 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I +K M + + Sbjct: 241 YEMNSKVISAVDKMMSFVNQQL 262 >gi|78067835|ref|YP_370604.1| flagellar basal body rod protein FlgG [Burkholderia sp. 383] gi|77968580|gb|ABB09960.1| conserved hypothetical protein [Burkholderia sp. 383] Length = 262 Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 89/259 (34%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + ++ +++N++NT T GF+ + F +++ Sbjct: 1 MNRSLYIAATGMNAQQAQMDVISNNLANTSTNGFKASRAVFEDLLYQTIRQPGANSTQQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V G TG D A+ G +F + P G TRDG F Sbjct: 61 ELPSGLQLGTGVQQVATERLYTQGGLTQTGNSKDVAINGAGFFQVLMPDGTNAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 + G LV++SG + + + V S I ++ + + Sbjct: 121 QTNAQGQLVTSSGYQVLPAITIPQNATSLTIGKDGVVTVTQAGSTNSVQIGSLQVATFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G R + S T+ + ++E SN N + E+ MI + + Sbjct: 181 PAGLEARGENLFSETTSSGAPNVSQPGLNGAGTLSQNYVESSNVNVVQELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + Sbjct: 241 EINSKAVTTSDQMLQTVTQ 259 >gi|300024606|ref|YP_003757217.1| flagellar basal-body rod protein FlgG [Hyphomicrobium denitrificans ATCC 51888] gi|299526427|gb|ADJ24896.1| flagellar basal-body rod protein FlgG [Hyphomicrobium denitrificans ATCC 51888] Length = 262 Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats. Identities = 41/261 (15%), Positives = 98/261 (37%), Gaps = 21/261 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----------- 50 + +I A + + +A+N++N +T GF+ + +F++++ Sbjct: 1 MRALSIAATGMSAQQTNVEVIANNVANINTTGFKRARAEFTDLLYQTDRAAGTLARDDDT 60 Query: 51 ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRF 106 + +Q V + G+ T +LD AL+G +F ++ I+ TR G F Sbjct: 61 MIPEGNQIGLGVRTVAIRHLSMQGALAPTSNKLDLALDGRGYFQVQGENNEILYTRAGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIP-QKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 +G LV+ G + ++ Q + V + + +++ + + + Sbjct: 121 NKDANGQLVTLEGNVVIPNITIPSTATDVQINASGQVYAIIGATGQQQLLGQLSIANFAN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + N + + +G+LE SN + + E+ ++I + + Sbjct: 181 ETGLDALGGNLFRENQASGAAVIGNPGDSGFAKIHQGYLESSNVDPVKEITELIAAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + +I + +N+ Sbjct: 241 EMNSKVISAADDMFSTITKNM 261 >gi|329297209|ref|ZP_08254545.1| Flagellar basal-body rod protein flgG [Plautia stali symbiont] Length = 260 Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats. Identities = 41/259 (15%), Positives = 86/259 (33%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + + +A+N++N T GF+ + F +++ Sbjct: 1 MIRSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRSRAVFEDLMYQTLRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V G+ T + A+ G +F ++ P G TRDG F Sbjct: 61 TLPSGLQIGTGVRPVTTERLHNQGNLSQTSNSKNVAINGQGYFQVQMPDGTSAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V +G LV+ +G + V + + + + L + Sbjct: 121 QVDQNGQLVTNAGFPVQPGITIPANATSITIARDGVVTVTQQGQTQPAQVGQLTLSTFMN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + + ++E SN N E+ MI + + Sbjct: 181 DAGLDSVGENLYQETQASGAPTESTPGQNGAGLLYQSYVETSNVNVAEELVTMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + I +++ + + + Sbjct: 241 EINSKAISTSDQMLQKLTQ 259 >gi|254562217|ref|YP_003069312.1| flagellar basal-body rod protein flgF [Methylobacterium extorquens DM4] gi|254269495|emb|CAX25461.1| flagellar basal-body rod protein flgF [Methylobacterium extorquens DM4] Length = 246 Score = 161 bits (408), Expect = 6e-38, Method: Composition-based stats. Identities = 65/247 (26%), Positives = 120/247 (48%), Gaps = 9/247 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN-----DIDQK 55 MQ + +G++AQ AL + L +A+NM+N T GF+ +F E + + + D++ Sbjct: 1 MQNALFVGVSAQTALARELDVIANNMANVSTTGFKARSARFQEYLMPVASADSFQRSDRR 60 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115 +S+V L G + AL GDA+ A+++P+G+ TR+G F++ G+LV Sbjct: 61 LSYVIDQGTPLDLTQGPVEPDSNPMHVALRGDAFLAVQTPQGLRYTRNGAFELDATGNLV 120 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 ++ G D PI I Q++ + G IS + + L + +Q + Sbjct: 121 TSDGHAVQGD--GGPITIGQQETGLAIAPDGTISTNLGIRGRLRLVTFANAQALKSEGAN 178 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 S P P +GV ++ G LE SN + EM +++ + + ++ ++++I + Sbjct: 179 LFSSEAPARP--AGAGVHLEPGALERSNVKPVVEMTRLMDVNRTYSMVSSVISRLDDLRG 236 Query: 236 EAIRNIA 242 AIR +A Sbjct: 237 TAIRRLA 243 >gi|167623363|ref|YP_001673657.1| flagellar basal body rod protein FlgG [Shewanella halifaxensis HAW-EB4] gi|167353385|gb|ABZ75998.1| flagellar basal-body rod protein FlgG [Shewanella halifaxensis HAW-EB4] Length = 262 Score = 161 bits (408), Expect = 6e-38, Method: Composition-based stats. Identities = 40/262 (15%), Positives = 91/262 (34%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + I A + +S +++N++N TVGF+ + F +++ + Sbjct: 1 MHPALWISKTGLDAQQTDISVISNNVANASTVGFKKSRAVFEDLLYQNVSQAGGISASNT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 + G+ ++T LD +EG +F ++ P G TR+G+F Sbjct: 61 KLPNGLSIGAGTKVVATQEMFTQGNMLTTDNSLDLMVEGPGFFEVQLPDGTAAYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQK--GKVIATMGLYSVD 164 + + G +V+ Y + ++P + +V+ + + Sbjct: 121 SLDETGQIVTPGSGYVIQPAITIPEGATSITVSAEGEVSVKTPGNAENQVVGQLAIADFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + +++G LE SN N E+ +I + Sbjct: 181 NPSGLDPMGQNLYLETGASGTPIQGTASLDGMGAIRQGALETSNVNVTEELVNLIESQRI 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I ++ + +N+ Sbjct: 241 YEMNSKVISAVDQMLSYVNQNL 262 >gi|262404538|ref|ZP_06081093.1| flagellar basal-body rod protein FlgG [Vibrio sp. RC586] gi|262349570|gb|EEY98708.1| flagellar basal-body rod protein FlgG [Vibrio sp. RC586] Length = 262 Score = 161 bits (408), Expect = 6e-38, Method: Composition-based stats. Identities = 45/262 (17%), Positives = 96/262 (36%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 MQ + + A + ++T+++N++N T+GF+ + F ++ N + Sbjct: 1 MQPALWVSKTGLDAQQTNIATISNNLANASTIGFKKGRAVFEDLFYQNINQPGAQSSQNT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + G+ +T LD +EGD +F + P I +R+G+F Sbjct: 61 RLPSGLMLGAGSKVVATQKVHTHGNAQTTSNSLDMMIEGDGFFQILMPDGNIAYSRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD--EIFNVGEKGEISQKGKVIATMGLYSVD 164 + D+G++V++ Y + +P V + Q +V+ + Sbjct: 121 TLDDEGAIVTSGSGYRLQPEIVIPEDAISITIGNDGEVSVRVRGQQDNQVLGQITTVDFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + P ++ V++ LE SN N E+ MI + Sbjct: 181 NPGGLEPIGQNLYLPTGASGEPQEGVPGLDGLGDVRQSMLETSNVNVTEELVNMIEAQRV 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I +K + + + Sbjct: 241 YEMNSKVISAVDKMLSFVNQQL 262 >gi|163789641|ref|ZP_02184079.1| flagellar hook protein [Carnobacterium sp. AT7] gi|159875173|gb|EDP69239.1| flagellar hook protein [Carnobacterium sp. AT7] Length = 289 Score = 161 bits (408), Expect = 6e-38, Method: Composition-based stats. Identities = 55/286 (19%), Positives = 103/286 (36%), Gaps = 47/286 (16%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN------DIDQ 54 M S G+ ++ ++ +++N++N +T F+T +V+F +++ + Q Sbjct: 1 MLKSLYSGVTGMKNIQTKMDVISNNIANVNTTAFKTGRVRFEDMLSQTNASAQTGINAQQ 60 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEG--DAWFALESPRGIILTRDGRFKVTDDG 112 V G GS STG LDF +E ++F ++ TRDG F +G Sbjct: 61 VGLGVQVGSIDTVMSGGSLQSTGRALDFGIENGDSSFFTVKEGDNTFYTRDGGFYTDPNG 120 Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ---------------------- 150 +LV++ G +A+ P + +S Sbjct: 121 NLVTSGGLKVQGFVANPPAVNDTNFNPDTFVDGKTMSAITIPQSIGEGADKADLQSYSVD 180 Query: 151 ------------KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVT 193 K V+ +GL S G + + + E + Sbjct: 181 SKGFIVGSYSGGKSMVLGRVGLTSFSNPDGLQKSGGNLYTETANSGAPEAGSPGEPGYGS 240 Query: 194 VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 V+ GFLE SN + E +MI ++ + + + I ++ + E I Sbjct: 241 VRSGFLEMSNVDLANEFTEMIVTSRSYQANSRSITTSDTMLEELIN 286 >gi|88858141|ref|ZP_01132783.1| flagellar biosynthesis; cell-distal portion of basal-body rod [Pseudoalteromonas tunicata D2] gi|88819758|gb|EAR29571.1| flagellar biosynthesis; cell-distal portion of basal-body rod [Pseudoalteromonas tunicata D2] Length = 262 Score = 161 bits (408), Expect = 6e-38, Method: Composition-based stats. Identities = 41/262 (15%), Positives = 95/262 (36%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + I A + +S +++N++N TVG++ + F +++ N + Sbjct: 1 MHPALWISKTGLDAQQTDISVISNNLANASTVGYKKSRAVFEDLLYQNINQPGGRSSQDT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + + G+ I+T +D+ ++G +F + P + +R G+F Sbjct: 61 EMPSGLMLGAGTKVVATQKNFSQGNMITTDNSMDWMIQGQGFFEVLLPDGSLAYSRAGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFN--VGEKGEISQKGKVIATMGLYSVD 164 DG +V++ +PV +VP + V + VI + + Sbjct: 121 TTDGDGRVVTSGAGFPVQPEMNVPNDAQSLTISQDGEVSVRVRGQADNVVIGQLTISDFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQK 219 G + + + + +G LE SN N+ E+ +I + Sbjct: 181 NPSGLEPMGQNLFTETAVSGAPIQGNPGADGLGVIVQGALETSNVNTTEELVNLIETQRI 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I ++ + + + Sbjct: 241 YEMNSKVISSVDQMLNFINQQL 262 >gi|163758009|ref|ZP_02165097.1| flagellar basal-body rod protein [Hoeflea phototrophica DFL-43] gi|162284298|gb|EDQ34581.1| flagellar basal-body rod protein [Hoeflea phototrophica DFL-43] Length = 241 Score = 161 bits (408), Expect = 6e-38, Method: Composition-based stats. Identities = 98/243 (40%), Positives = 154/243 (63%), Gaps = 4/243 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 MQ S + L++Q+ALE+R++T+ADN++N +T GFR ++KF+EV+ + +SFV Sbjct: 1 MQGSLYVALSSQIALERRMNTLADNVANANTTGFRATEIKFNEVLA---DTGVANVSFVN 57 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 G++YLS E G +TG++LDFA+ G+AWF +E+P G +LT+DGRF +T G LV+ G Sbjct: 58 QGEDYLSTENGGLRTTGSQLDFAIRGEAWFMVETPTGNMLTKDGRFTITQAGELVNIDGY 117 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 PVLD PIQ+ + G G ++Q G I +GLY D+SQG+ R+ + G+ PN Sbjct: 118 -PVLDPGGAPIQLNPAGDPPKAGRDGGLTQDGVRIGAIGLYQADLSQGYYRQGSLGVVPN 176 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 +PP + D +G + +G++EDSN N + EM +I +++ F + + + E EAIR Sbjct: 177 VPPEAVVDTAGTGLLQGYIEDSNVNPILEMTNLIMVSRAFENTSAMTRATEDVFKEAIRT 236 Query: 241 IAS 243 + S Sbjct: 237 LGS 239 >gi|34497161|ref|NP_901376.1| flagellar basal body rod protein FlgG [Chromobacterium violaceum ATCC 12472] gi|34103018|gb|AAQ59381.1| flagellar basal-body rod protein flgG [Chromobacterium violaceum ATCC 12472] Length = 262 Score = 161 bits (408), Expect = 6e-38, Method: Composition-based stats. Identities = 44/262 (16%), Positives = 93/262 (35%), Gaps = 20/262 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + I A + RL+ +A+N++N +T GF+ ++ F ++ ++ Sbjct: 1 MNPALWISKTGIQAQDARLTAIANNLANVNTTGFKRDRMIFEDLFYQVEKQPGSKVDDNN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 Q + G+ +T LD A+ G + ++ G TR G+ Sbjct: 61 VSPSGVQMGNGTRLVGSQKVFTEGNITTTNQSLDVAIIGQGFLQVKMANGETGYTRAGQL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEIS-QKGKVIATMGLYSVDM 165 ++ DG L +A G ++ S + + + L S Sbjct: 121 SLSKDGVLQTAQGLPLEPEIRIPADATKISISETGEVAVTRGSGTTPEAVDRIQLASFIN 180 Query: 166 SQGFVRRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + ++ P + + +K+G LE SN + EM MI + + Sbjct: 181 PAGLLALGDNLFQKTDASGDANPGDPGNGALGKLKQGSLEGSNVQVVEEMVDMIAAQRTY 240 Query: 221 NSITTLIDENEKSMLEAIRNIA 242 T ++ + + + +++ Sbjct: 241 EMNTKVLSAADNMLQQLGQSVR 262 >gi|15887898|ref|NP_353579.1| flagellar basal body rod protein FlgG [Agrobacterium tumefaciens str. C58] gi|20141428|sp|Q44338|FLGG_AGRT5 RecName: Full=Flagellar basal-body rod protein flgG; AltName: Full=Distal rod protein gi|15155490|gb|AAK86364.1| flagellar basal-body rod protein [Agrobacterium tumefaciens str. C58] Length = 262 Score = 161 bits (408), Expect = 6e-38, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 96/261 (36%), Gaps = 21/261 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----------- 50 + I A + L +A+N++N +T G++ + +F++++ + Sbjct: 1 MRALAIAATGMDAQQTNLEVIANNIANINTTGYKRARAEFTDLLYQTERMQGVPNRANQA 60 Query: 51 ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + V + G+ I TG +LD A+ G WF +E+ + +R G F Sbjct: 61 IVPEGANIGLGVQTSAVRNIHTQGNLIETGNKLDVAIIGQGWFQIEAADGSTLYSRAGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 DG+LV+ G + ++ V + + + + + + Sbjct: 121 NKNADGNLVTVDGYNVIPNINIPTDAQDITITRTGQVTARIGNAADFTQLGQLTIANFAN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ S S VK+ +LE SN +++ E+ +I + + Sbjct: 181 EAGLKPLGDNLFSQTPASGAPVVGVPDDPSYGYVKQSYLEGSNVDAVKEITDLITAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + +I ++ +N+ Sbjct: 241 EMNSKVITTADEMASIVSKNL 261 >gi|84514831|ref|ZP_01002194.1| Flagellar distal rod protein [Loktanella vestfoldensis SKA53] gi|84510990|gb|EAQ07444.1| Flagellar distal rod protein [Loktanella vestfoldensis SKA53] Length = 261 Score = 161 bits (408), Expect = 6e-38, Method: Composition-based stats. Identities = 46/261 (17%), Positives = 104/261 (39%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + ++ A + R+ +A+N++N +TVGF++ +V F ++ +K + Sbjct: 1 MTNAMHVAKTGLNAQQTRMQVIANNLANLNTVGFKSDRVNFESLLYQVKRSGGDQTSEGT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + V + G ++T D A+EG +F + P + TR+G F Sbjct: 61 ALTSALALGTGVRAVNTQKLYTQGGMVNTDNSFDLAIEGQGFFQVLMPDGRVGYTRNGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIP-QKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 + DG++ +ASG ++ + V + ++ + + + + S Sbjct: 121 SRSADGTMTTASGYVVQPEIRIPADATEVNISQDGLVSVRQAGEEEAQEVGQLTIASFAN 180 Query: 166 SQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 +G S ++ + + + +G LE SN N + ++ +MI + + Sbjct: 181 PRGLQPIGESFVTQTLASGAPTVAAPQAQGLGKLMQGALEGSNVNVVQQLVEMIETQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + I +++ M N+ Sbjct: 241 EVSSKAISSSDEMMRYISNNL 261 >gi|167464160|ref|ZP_02329249.1| flagellar basal body rod protein FlgG [Paenibacillus larvae subsp. larvae BRL-230010] Length = 270 Score = 161 bits (407), Expect = 6e-38, Method: Composition-based stats. Identities = 46/267 (17%), Positives = 93/267 (34%), Gaps = 28/267 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--------- 51 M S G++ + +L + +N++N +T+GF+ +V F +++ Sbjct: 1 MLRSMYSGISGMRGFQTKLDVIGNNIANVNTIGFKGSRVMFQDLMSQTIRGATGPTDTQG 60 Query: 52 ---IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI---ILTRDGR 105 Q ++T + D +EGD +FA+++ LTR G Sbjct: 61 GVNGQQIGLGSTVASIDTLHTNTGAMNTYVKTDMRIEGDGYFAVKTSSESDTYYLTRAGN 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ----KGKVIATMGLY 161 FKV LV+A G + + + + + I +G+ Sbjct: 121 FKVDAQRRLVTADGMLVLNSDGDPIEFSENMTDYSFGADGTITQILKGGEKETIGQIGVV 180 Query: 162 SVDMSQGFVRRENSGISPNIPPTPLEDL---------SGVTVKRGFLEDSNANSMYEMGQ 212 V G ++ + + T+ G LE SN + E + Sbjct: 181 KVTNPSGLMKVGGNLFELTPNAHDGDPGISTPKNAETGTGTLMTGSLEMSNVDLTSEFTE 240 Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIR 239 MI + F + + +I +++ + E + Sbjct: 241 MIVAQRGFQANSRIITTSDEVLQEVVN 267 >gi|222824019|ref|YP_002575593.1| flagellar distal rod protein FlgG [Campylobacter lari RM2100] gi|222539241|gb|ACM64342.1| flagellar distal rod protein FlgG [Campylobacter lari RM2100] Length = 264 Score = 161 bits (407), Expect = 6e-38, Method: Composition-based stats. Identities = 38/263 (14%), Positives = 90/263 (34%), Gaps = 23/263 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M S + ++ + ++ ++N+SN +TVG++ + +F++++ S Sbjct: 1 MLRSLYTAASGMVSQQTQIDVTSNNISNVNTVGYKKSRAEFADLMYQTMKYAGTSTSSTT 60 Query: 61 SGKEY--------------LSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDG 104 + E ++ LD A+ G+ F I TR+G Sbjct: 61 KHPSGIEVGLGSRVTAISKIFSEGSLKQTSTAGLDMAIAGNNGFFQIQMPDGTIAYTRNG 120 Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQKGKVIATMGLYSV 163 +F +G++V++ G + +M + + I + L + Sbjct: 121 QFTKDAEGNIVNSDGYRLLPEMTIPEDATAINVASDGTISVMQPGNTAETQIGQIELVNF 180 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 G ++ + +K GF+E SN + EM +I + Sbjct: 181 INPAGLHALGDNLLVETDASGAPIAGIAGENGFSPIKHGFVELSNVQLVEEMTDLITGQR 240 Query: 219 KFNSITTLIDENEKSMLEAIRNI 241 + + + I ++ + + + Sbjct: 241 AYEAGSKAITTSDDMLG-IVNQL 262 >gi|302872713|ref|YP_003841349.1| fagellar hook-basal body protein [Caldicellulosiruptor obsidiansis OB47] gi|302575572|gb|ADL43363.1| fagellar hook-basal body protein [Caldicellulosiruptor obsidiansis OB47] Length = 255 Score = 161 bits (407), Expect = 7e-38, Method: Composition-based stats. Identities = 52/258 (20%), Positives = 104/258 (40%), Gaps = 21/258 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS-----------EVVGAIK 49 M + + ++ + A+N++N +T GF+ + + V + Sbjct: 1 MIRGIYTSASGMILNQKLMDITANNVANVNTTGFKRDVAQVESFRNMLVYRIYDKVSSPD 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP-----RGIILTRDG 104 N I + G +I T L+ A+ G+ +FA+E P + I+ TR+G Sbjct: 61 NAIGYMSLGADVSRIVSDFSQGLYIKTDEPLNLAIRGNGFFAIEVPGNQGAQQILYTRNG 120 Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 F + G LV+ G Y + I Q + E+G + Q G+ + + + Sbjct: 121 AFTLNSQGELVTLDGFYVLG---QNGRIILQNGGQVRIDEQGNVYQDGRFVDRLRVVDFQ 177 Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224 Q + N+ + + + +G+LE SN NS+ EM MI++ + + + Sbjct: 178 DKQLLRKVGNNLFEADAT--AQQIPFSGRIVQGYLEGSNVNSVQEMVNMINVLRAYEANQ 235 Query: 225 TLIDENEKSMLEAIRNIA 242 ++++ +A+ IA Sbjct: 236 KAFTIQDETLQKAVSEIA 253 >gi|209964690|ref|YP_002297605.1| flagellar basal body rod protein FlgG [Rhodospirillum centenum SW] gi|209958156|gb|ACI98792.1| flagellar basal-body rod protein FlgG [Rhodospirillum centenum SW] Length = 261 Score = 161 bits (407), Expect = 7e-38, Method: Composition-based stats. Identities = 50/259 (19%), Positives = 98/259 (37%), Gaps = 21/259 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 S +IG LA + + +++N++N T GF+ + +F +++ + Sbjct: 1 MRSLSIGATGMLAQQLNVEVISNNIANMTTTGFKRQRAEFQDLLYQNMRRVGSTSSDAGT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V + Y E G+ TG LD A+ G +F +E P TR G F Sbjct: 61 VVPSGVQIGAGVKTAAVYRINEQGNISVTGNALDLAINGQGYFQVELPDGQTAYTRAGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 ++ +G++V+A G + + V K + + I + L + Sbjct: 121 QLNAEGTIVTADGYQLQPGLVVPENAVDITVNPNGEVLVKLDGQTQPANIGQIQLATFPN 180 Query: 166 SQGFVRRENSGISP-----NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ + NI V + LE SN N + E+ +I + + Sbjct: 181 PAGLEAIGDNLLLESPASGNIIAGNPGAPGFGRVIQQALETSNVNIVSEITNLITAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + +I +++ M + Sbjct: 241 EMNSRVISTSDQMMQSISQ 259 >gi|87119674|ref|ZP_01075571.1| Flagella basal body rod protein [Marinomonas sp. MED121] gi|86165150|gb|EAQ66418.1| Flagella basal body rod protein [Marinomonas sp. MED121] Length = 261 Score = 161 bits (407), Expect = 7e-38, Method: Composition-based stats. Identities = 44/261 (16%), Positives = 97/261 (37%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A++++LS +++N++N T GF+ + F +++ Sbjct: 1 MHPALWVSKTGLSAMDKQLSVISNNLANVSTTGFKKDRAVFEDLLYHTVQQPGGLQSQNT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 Q + V G + T +LD A++G +F + P G + TRDG+F Sbjct: 61 QLPSGLQMGAGVRVSATQKDFSEGDYNVTDRDLDVAIQGQGFFQILMPDGNMGYTRDGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQKGKVIATMGLYSVDM 165 ++ +G LV++SG + + + + + + + L Sbjct: 121 QLNSEGDLVTSSGFLVEPQVTIPQDAMSVTIGDDGTVSIVRQGASESEGVGQLSLAGFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 +G + T V++ +E SN NS+ E+ +I + + Sbjct: 181 PEGLSSIGQNLFVETSASGAPIIDVPGTSALGNVRQNMVETSNVNSVEELVSLITAQRGY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + ++ + M I+ + Sbjct: 241 EMNSKVVSAADGMMSFVIQQL 261 >gi|328948267|ref|YP_004365604.1| flagellar basal-body rod protein FlgG [Treponema succinifaciens DSM 2489] gi|328448591|gb|AEB14307.1| flagellar basal-body rod protein FlgG [Treponema succinifaciens DSM 2489] Length = 264 Score = 161 bits (407), Expect = 7e-38, Method: Composition-based stats. Identities = 57/260 (21%), Positives = 97/260 (37%), Gaps = 22/260 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S + + T+++N+SN +T GF+ + +F +++ Sbjct: 1 MVRSLWNAATGMNGQQMNIDTISNNLSNVNTTGFKQHRAEFEDLLYQNVKLAGTPATEDT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q S V G GS +TG + D A+ GD +F ++ G TRDG F Sbjct: 61 VTPVGHQMGSGVKVGATQRIMTQGSLQATGVDTDVAVVGDGFFRVQQYDGSWAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF---NVGEKGEISQKGKVIATMGLYSV 163 KV G LV+A+G + ++ + I V K + + + LY Sbjct: 121 KVDSTGQLVTANGLRVMPEIIMPEGFQLETLSISDGGRVNIKVNGELEPVEVGQLELYRF 180 Query: 164 DMSQGFVRRENSGI-SPNIPPTPLE----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 + G ++ N P+ K FLE SN + + EM QMI + Sbjct: 181 PNAVGLENTGDNLYKVTNASGEPIAGRPGIDGMGITKHKFLEMSNVSVVNEMVQMIVAQR 240 Query: 219 KFNSITTLIDENEKSMLEAI 238 + + I ++ + A Sbjct: 241 AYEFNSKAIQTSDNMLQTAA 260 >gi|288958674|ref|YP_003449015.1| flagellar basal-body rod protein [Azospirillum sp. B510] gi|288910982|dbj|BAI72471.1| flagellar basal-body rod protein [Azospirillum sp. B510] Length = 240 Score = 161 bits (407), Expect = 7e-38, Method: Composition-based stats. Identities = 63/242 (26%), Positives = 112/242 (46%), Gaps = 5/242 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M+ S + ++ Q+AL+++L ++N++N +T G++ ++ F+E + K + +K+SFV Sbjct: 1 MENSIYVAMSRQMALQRQLDVTSNNIANMNTTGYKNQRMLFTEFL--EKPGLHEKVSFVQ 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 G+ TG LD AL G +F +++ G TR G F++ D LV A G Sbjct: 59 DRAVVRDLSNGAMTQTGNPLDLALTGQGYFTVDTASGPRYTRAGNFRMNDQRQLVDA-GG 117 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 PVL PI +P V G ++ + +A + + + Q N Sbjct: 118 LPVLSNNGQPITLPAGTSDVKVSGDGTVATELGPVAKLNIVTFKNEQLMTEVGNGLYVT- 176 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 P + V +G LE SN + EM QMI + +++ S +ID + + I+ Sbjct: 177 -DEQPQPAPAETKVAQGLLEGSNVKPVVEMTQMIDIQRQYMSAQKMIDNEHERIRTMIQR 235 Query: 241 IA 242 + Sbjct: 236 LG 237 >gi|85710166|ref|ZP_01041231.1| flagellar basal-body rod protein [Erythrobacter sp. NAP1] gi|85688876|gb|EAQ28880.1| flagellar basal-body rod protein [Erythrobacter sp. NAP1] Length = 263 Score = 161 bits (407), Expect = 7e-38, Method: Composition-based stats. Identities = 46/260 (17%), Positives = 96/260 (36%), Gaps = 21/260 (8%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------- 55 ++ ++ A + R+ +A+N++N T GF+ + +F+ + Q+ Sbjct: 4 SALHVARTGLEAQDARMRVIANNLANIGTTGFKRDRAEFATLAYQEMRVAGQQSTQQTAF 63 Query: 56 ------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR--GIILTRDGRFK 107 + V + G+ TG LD AL+G +F +E P I TR G F Sbjct: 64 ATGLNLGTGVQVTGTSRIEAQGTLNQTGNSLDLALDGPGFFQVELPGGGDIAYTRAGNFT 123 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDMS 166 ++ +G LV+ G + V I + + S Sbjct: 124 LSPEGQLVTTQGYALTPPIQVPQGAQNITIAPDGTVSAVQPGQTAPIQIGQLQVASFVNP 183 Query: 167 QGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221 G ++ + P++ +++G LE SN N + E+ +MI + + Sbjct: 184 AGLRAIGDNFLVETAASGPVDAGLAGQFGRGNIRQGMLETSNVNVVEELVEMIEAQRAYE 243 Query: 222 SITTLIDENEKSMLEAIRNI 241 + ++ ++ + A + + Sbjct: 244 INSKMVSSVDEMLRNANQTL 263 >gi|300722680|ref|YP_003711970.1| flagellar basal-body rod cell-distal protein [Xenorhabdus nematophila ATCC 19061] gi|297629187|emb|CBJ89783.1| flagellar biosynthesis; cell-distal portion of basal-body rod [Xenorhabdus nematophila ATCC 19061] Length = 260 Score = 161 bits (407), Expect = 7e-38, Method: Composition-based stats. Identities = 45/259 (17%), Positives = 92/259 (35%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I + + +A+N++N T GF+ +V E++ + Sbjct: 1 MIRSLWIAKTGLDVQQTNMDVIANNLANVSTSGFKRQRVVSEELIYQTERQPGAMSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 Q + G+ T D A++G +F ++ P G TRDG F Sbjct: 61 NLPSGLQIGTGARPVATERLHSQGNLAQTNNTKDVAIKGQGFFQIQMPDGTTGYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V +G LV+A G V + + + + + + L + Sbjct: 121 QVDQNGQLVTAGGFQVVPAIIIPDNATKIGIARDGIISVNVQGQNAPQQVGQLTLTTFIN 180 Query: 166 SQGFVRRENSGI-SPNIPPTPLEDLS----GVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + N P+E+ + +G++E SN N E+ MI + + + Sbjct: 181 ESGLESIGENLYLETNSSGVPVENAPGINGTGLLYQGYVETSNVNVAEELVNMIQVQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + + Sbjct: 241 EINSKAVSTSDQMLQKLTQ 259 >gi|330445350|ref|ZP_08309002.1| flagellar basal-body rod protein FlgG [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489541|dbj|GAA03499.1| flagellar basal-body rod protein FlgG [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 262 Score = 161 bits (407), Expect = 7e-38, Method: Composition-based stats. Identities = 48/262 (18%), Positives = 96/262 (36%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + + A + +ST+++N++N TVGF+ + F ++ N + Sbjct: 1 MHPALWVSKTGLDAQQTNISTISNNLANASTVGFKKGRAVFEDLFYQNINQPGGQSTQDT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + G+ +T +D +EGD +F + P I TR+G+F Sbjct: 61 TLPTGLMLGAGSKVVATQKVFTQGNTQTTNNAMDMMIEGDGFFQVLLPDGNIGYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD--EIFNVGEKGEISQKGKVIATMGLYSVD 164 + DG LV++ YPV VP V + Q+ +V+ + Sbjct: 121 TINADGQLVTSGSGYPVQPEIVVPEDAVGITVGTDGEVSARIRGEQENQVLGQITTVDFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + P ++ ++++ LE SN N E+ MI + Sbjct: 181 NPGGMEPIGQNLFLPTGASGDPQEGTPGLEGYGSIRQSMLETSNVNVTEELVNMIEAQRV 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I ++ + + + Sbjct: 241 YEMNSKVISTVDQMLSYVNQQL 262 >gi|319403955|emb|CBI77543.1| Flagellar basal-body rod protein flgF [Bartonella rochalimae ATCC BAA-1498] gi|319406971|emb|CBI80608.1| Flagellar basal-body rod protein flgF [Bartonella sp. 1-1C] Length = 244 Score = 161 bits (407), Expect = 7e-38, Method: Composition-based stats. Identities = 74/241 (30%), Positives = 135/241 (56%), Gaps = 1/241 (0%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 MQ +G++ Q+ LE+R+ T+A NM+N +T GF+ +KF ++ ++ ++ ++ F + Sbjct: 1 MQNPIYVGVSGQIGLERRMETIAQNMANVNTPGFQAGGMKFDTLLSSVAHEQGDRVFFTS 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 +GK Y+S + GS + TG LD A+ GD++F++++ G + TRDGR +T +G LVS +G Sbjct: 61 AGKGYISTDRGSLVETGNALDIAVVGDSYFSMQASFGQVYTRDGRMIMTPEGGLVSVTG- 119 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 P LD PIQ+ + G I Q + +GL+ NS + P+ Sbjct: 120 LPFLDEGGAPIQLNPAGGTPRIVADGSIYQDNAFVGKIGLFQFQPGTQLRYGPNSSVIPD 179 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 E SG TV +G++E SN N + EM ++I +++ F + +++ + E+ ++I+ Sbjct: 180 KAAFQSEGGSGDTVVQGYIESSNVNGVIEMTRLIEVSRAFERVESMLRQQEEMRSKSIQI 239 Query: 241 I 241 + Sbjct: 240 L 240 >gi|328545467|ref|YP_004305576.1| flagellar basal body rod protein [polymorphum gilvum SL003B-26A1] gi|326415208|gb|ADZ72271.1| Flagellar basal body rod protein [Polymorphum gilvum SL003B-26A1] Length = 241 Score = 161 bits (407), Expect = 7e-38, Method: Composition-based stats. Identities = 80/242 (33%), Positives = 147/242 (60%), Gaps = 4/242 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 MQ++ + L+AQ++L RL TVA N++N +T G+R ++KF+EV+ D +SF Sbjct: 1 MQSALYVALSAQVSLSNRLETVARNVANMNTAGYRADEIKFAEVLSKAGAD---PVSFAT 57 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 +G+ Y+S++ G T LD A+EGD W A+ + G++ TRDGR K+ +DG L + +G Sbjct: 58 AGERYISRQHGGLTRTDNPLDVAVEGDGWLAVRTGAGVVYTRDGRMKMDNDGVLRTLNGY 117 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 LD +PI + ++ + +G G ++Q V +GL+ +D R +NSG+ P+ Sbjct: 118 DV-LDAGGLPILLDREGGMPVIGRDGTVTQGEDVAGALGLFRIDERAKLTRFDNSGVIPD 176 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 IP P+++ + + +G++E +N N + E+ ++I +T+ F T++I+ +++S +AIR+ Sbjct: 177 IPAEPIQEFTSSGMVQGYVEGANINPIRELTKLIMITRAFEGATSMIEASDRSQEQAIRD 236 Query: 241 IA 242 + Sbjct: 237 LG 238 >gi|146293688|ref|YP_001184112.1| flagellar basal body rod protein FlgG [Shewanella putrefaciens CN-32] gi|145565378|gb|ABP76313.1| flagellar basal-body rod protein FlgG [Shewanella putrefaciens CN-32] gi|319427087|gb|ADV55161.1| flagellar basal-body rod protein FlgG [Shewanella putrefaciens 200] Length = 262 Score = 161 bits (407), Expect = 7e-38, Method: Composition-based stats. Identities = 39/262 (14%), Positives = 93/262 (35%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + I A + ++ +++N++N TVG++ + F +++ N Sbjct: 1 MHPALWISKTGLDAQQTDIAVISNNVANASTVGYKKSRAVFEDLLYQTVNQAGGISASNT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + G+ ++T LD +EG +F ++ P TR+G+F Sbjct: 61 KLPNGLNIGAGTKVVATQKMFTQGNMLTTDNSLDLMIEGPGFFEIQLPDGTTAYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEIS--QKGKVIATMGLYSVD 164 + D G +V+ Y + ++P + + + +V+ + + Sbjct: 121 TLDDTGQIVTPGSGYVLQPAITIPEDATSITVSAEGEVSVKTAGAAENQVVGQLSMTDFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + + +++G LE SN N E+ +I + Sbjct: 181 NPSGLDPMGQNLYTETGASGTPIQGTASLDGMGAIRQGALETSNVNVTEELVNLIESQRI 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I ++ + +N+ Sbjct: 241 YEMNSKVISAVDQMLAYVNQNL 262 >gi|325291939|ref|YP_004277803.1| flagellar basal body rod protein FlgG [Agrobacterium sp. H13-3] gi|325059792|gb|ADY63483.1| flagellar basal body rod protein FlgG [Agrobacterium sp. H13-3] Length = 262 Score = 161 bits (407), Expect = 8e-38, Method: Composition-based stats. Identities = 42/261 (16%), Positives = 96/261 (36%), Gaps = 21/261 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----------- 50 + I A + L +A+N++N +T G++ + +F++++ + Sbjct: 1 MRALAIAATGMDAQQTNLEVIANNIANINTTGYKRARAEFTDLLYQTERMQGVPNRANQA 60 Query: 51 ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + V + G+ I TG +LD A+ G WF +E+ + +R G F Sbjct: 61 IVPEGANIGLGVQTSAVRNIHTQGNLIETGNKLDVAIIGQGWFQIEAADGSTLYSRAGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 DG+LV+ G + ++ V + + + + + + Sbjct: 121 NKNADGNLVTVDGYNVIPNINIPTDAQDITITRTGQVTARIGNAADFTELGQLTIANFAN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ S S +K+ +LE SN +++ E+ +I + + Sbjct: 181 EAGLKPLGDNLFSQTPASGAAVIGVPDDPSYGYIKQSYLEGSNVDAVKEITDLITAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + +I ++ +N+ Sbjct: 241 EMNSKVITTADEMASIVSKNL 261 >gi|120598234|ref|YP_962808.1| flagellar basal body rod protein FlgG [Shewanella sp. W3-18-1] gi|120558327|gb|ABM24254.1| flagellar basal-body rod protein FlgG [Shewanella sp. W3-18-1] Length = 262 Score = 161 bits (407), Expect = 8e-38, Method: Composition-based stats. Identities = 39/262 (14%), Positives = 93/262 (35%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + I A + ++ +++N++N TVG++ + F +++ N Sbjct: 1 MHPALWISKTGLDAQQTDIAVISNNVANASTVGYKKSRAVFEDLLYQTVNQAGGISASNT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + G+ ++T LD +EG +F ++ P TR+G+F Sbjct: 61 KLPNGLNIGAGTKVVATQKMFTQGNMLTTDNSLDLMIEGPGFFEVQLPDGTTAYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEIS--QKGKVIATMGLYSVD 164 + D G +V+ Y + ++P + + + +V+ + + Sbjct: 121 TLDDTGQIVTPGSGYVLQPAITIPEDATSITVSAEGEVSVKTAGAAENQVVGQLSMTDFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + + +++G LE SN N E+ +I + Sbjct: 181 NPSGLDPMGQNLYTETGASGTPIQGTASLDGMGAIRQGALETSNVNVTEELVNLIESQRI 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I ++ + +N+ Sbjct: 241 YEMNSKVISAVDQMLAYVNQNL 262 >gi|163794152|ref|ZP_02188125.1| Flagellar basal body rod protein [alpha proteobacterium BAL199] gi|159180766|gb|EDP65285.1| Flagellar basal body rod protein [alpha proteobacterium BAL199] Length = 261 Score = 161 bits (407), Expect = 8e-38, Method: Composition-based stats. Identities = 41/262 (15%), Positives = 95/262 (36%), Gaps = 22/262 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55 S NI A + + +++N++N +T G++ + +F +++ + Sbjct: 1 MQSLNIASTGMAAQQFNVEVISNNIANMNTTGYKRQRAEFQDLLYQDLRRVGTNSSDAGT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 V + Y E G+ T + D A+ G +F +E P TR G F Sbjct: 61 IVPSGIQIGVGVKTAATYRINEQGALTLTDNKFDLAILGQGYFQVELPNGETAYTRAGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE-KGEISQKGKVIATMGLYSVDM 165 + DG+LV+ G + + + + + + + + L Sbjct: 121 QTNQDGTLVTPDGYTVQPGITIPSDTLSVTINESGQVFAQIDGQVQEQNVGQLQLAIFQN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + +++GF+E SN + ++E+ +I + + Sbjct: 181 DAGLENIGQNLLLETSASGAATTGVPGATGFGKLQQGFVEASNVDPVHEITNLITAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNIA 242 + +I+ +++ M + N+ Sbjct: 241 ELNSKIIETSDQMM-STVNNVR 261 >gi|296531727|ref|ZP_06894555.1| flagellar basal-body rod protein FlgG [Roseomonas cervicalis ATCC 49957] gi|296267943|gb|EFH13742.1| flagellar basal-body rod protein FlgG [Roseomonas cervicalis ATCC 49957] Length = 260 Score = 161 bits (407), Expect = 8e-38, Method: Composition-based stats. Identities = 46/258 (17%), Positives = 89/258 (34%), Gaps = 20/258 (7%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + NI A + + +A N++N T F K +F +++ + Sbjct: 1 MRAMNIAATGMQAQQTNVEVIAHNIANVSTTAFTRRKAEFQDLLYQSGERVGSASSEAGT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q V + G+ TG D ALEG +F ++ P G TRDG F Sbjct: 61 LLPVGTQVGLGVRNSAINRITVQGTLNETGNRYDLALEGRGYFGIDLPDGTVAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 K++ +G +V+ G + + + + + + L+ Sbjct: 121 KLSQEGQIVTTEGYPIQPAINVPIDARDVTVNQAGEVLVTQANGQQQNAGRLNLFLFPNE 180 Query: 167 QGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221 G + V++G+LE SN N + E+ Q+I + + Sbjct: 181 AGLEAIGGNKFLETEASGQPNQGLPSDPGYARVRQGYLEASNVNVVQEITQLIAAQRAYE 240 Query: 222 SITTLIDENEKSMLEAIR 239 + +I+ ++ + A Sbjct: 241 MNSKVIEATDQMLQTANN 258 >gi|256376465|ref|YP_003100125.1| hypothetical protein Amir_2339 [Actinosynnema mirum DSM 43827] gi|255920768|gb|ACU36279.1| protein of unknown function DUF1078 domain protein [Actinosynnema mirum DSM 43827] Length = 276 Score = 161 bits (407), Expect = 8e-38, Method: Composition-based stats. Identities = 44/273 (16%), Positives = 93/273 (34%), Gaps = 34/273 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50 M S G++ A +Q + +N+SN +T GF++ + F + + Sbjct: 1 MLRSLFSGISGLRAHQQMMDVTGNNISNVNTTGFKSSQTVFEDTLSQTLRAAQAAGANTA 60 Query: 51 --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 + Q V + + G+ STG D ++GD +F + S + TR G Sbjct: 61 ATNPAQVGLGVRTAGINTNFNQGTTQSTGRNTDMLIQGDGFFVVNSSGQQLYTRAGALSF 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEI-----------------FNVGEKGEISQK 151 G L + +G MA+ + + + + Sbjct: 121 DAAGQLTTPAGGILQGWMANGAGVVDKNQPVAGLTVDKGTYTSFSVSGDGTIVGVLANGT 180 Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANS 206 + + + + + G + S + P++ V G LE SN + Sbjct: 181 PRTVGQIAMANFANPGGLDKAGGSFYRATVNSGPVQIGGAGDNGTGAVVSGALEMSNVDL 240 Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E +I + F + + +I +++ + + + Sbjct: 241 SQEFTNLIIAQRGFQANSKVITSSDEILQDLMN 273 >gi|319405396|emb|CBI79015.1| Flagellar basal-body rod protein flgF [Bartonella sp. AR 15-3] Length = 244 Score = 161 bits (407), Expect = 8e-38, Method: Composition-based stats. Identities = 75/241 (31%), Positives = 134/241 (55%), Gaps = 1/241 (0%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 MQ +G++ Q+ LE+R+ T+A NM+N +T GFR +KF +V ++ ++ + F + Sbjct: 1 MQNPIYVGVSGQIGLERRMETIAQNMANVNTPGFRAGGMKFDTLVSSVAHEQGDHVFFTS 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 +GK Y+S + GS I TG LD A+ GD++F++++ G + TRDGR +T +G LVS +G Sbjct: 61 AGKGYISTDRGSLIQTGNALDIAVTGDSYFSMQASFGQVYTRDGRMIMTPEGGLVSVTG- 119 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 P LD PIQ+ + + G I Q + +GL+ NS + P+ Sbjct: 120 LPFLDEGGAPIQLNPAGGMLRIVTDGSIYQDNVFVGKIGLFQFQPGTQLRYGPNSSVIPD 179 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 E+ +G V +G++E SN N + EM ++I +++ F + ++ + E+ ++I+ Sbjct: 180 RAAFQSEEGNGDGVVQGYIESSNVNGVIEMTRLIEVSRAFERVEAMLRQQEEMRSKSIQI 239 Query: 241 I 241 + Sbjct: 240 L 240 >gi|323139654|ref|ZP_08074696.1| flagellar basal-body rod protein FlgG [Methylocystis sp. ATCC 49242] gi|322395086|gb|EFX97645.1| flagellar basal-body rod protein FlgG [Methylocystis sp. ATCC 49242] Length = 262 Score = 161 bits (407), Expect = 8e-38, Method: Composition-based stats. Identities = 40/257 (15%), Positives = 86/257 (33%), Gaps = 21/257 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----------- 50 + I A +Q + +A N++N +T GF+ + +F++++ Sbjct: 1 MRALAIAATGMSAQQQNIEVIAHNIANINTTGFKRSRAEFTDLLYQTDRLQGVSNRGRDA 60 Query: 51 ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRF 106 Q V + ++ G +TG D ++ G WF + S + TR G F Sbjct: 61 TVPQGAQFGLGVRAAAVRSLQQQGPLTNTGNMYDLSMNGRGWFQILGSDNETLYTRAGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIP-QKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 ++G LV+ G + + + V + + I + + + Sbjct: 121 STNNNGQLVTVDGYLLTPTITIPNNTLNVSVSQSGIVSAIVAGQTQPQQIGQLTVANFAN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + +G+LE SN + + E+ +I + F Sbjct: 181 ESGLEALGGNLFRETYASGQPIVGIPGDPGFGVINQGYLESSNVDPVKELVSLISAQRAF 240 Query: 221 NSITTLIDENEKSMLEA 237 + +I ++ Sbjct: 241 ELNSKVIQAADEMAGTI 257 >gi|323495375|ref|ZP_08100452.1| flagellar basal body rod protein FlgG [Vibrio brasiliensis LMG 20546] gi|323310298|gb|EGA63485.1| flagellar basal body rod protein FlgG [Vibrio brasiliensis LMG 20546] Length = 262 Score = 161 bits (407), Expect = 8e-38, Method: Composition-based stats. Identities = 48/262 (18%), Positives = 95/262 (36%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + + A + +ST+++N++N TVG++ + F ++ N + Sbjct: 1 MHPALWVSKTGLDAQQTNISTISNNLANASTVGYKKSRAVFEDLFYQNINQPGGQSSQNT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + G+ +T LD +EGD +F + P I TR+G+F Sbjct: 61 ELPSGLMLGAGSKVVATQKVHTQGNTQTTNNSLDMMIEGDGFFQILMPDGNIGYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD--EIFNVGEKGEISQKGKVIATMGLYSVD 164 V D+G +V++ Y + ++P V + Q +V+ + Sbjct: 121 TVNDEGVIVTSGAGYALEPEIAIPEDAISVTIGTDGEVSVRVRGQQDNQVVGQIATVDFV 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + P ++ V++ LE SN N E+ MI + Sbjct: 181 NPGGLEPIGQNLYLPTGASGDPQEGVPGFDGFGEVRQSMLETSNVNVTEELVNMIEAQRV 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I +K M + + Sbjct: 241 YEMNSKVISAVDKMMSFVNQQL 262 >gi|307945666|ref|ZP_07661002.1| flagellar basal-body rod protein FlgG [Roseibium sp. TrichSKD4] gi|307771539|gb|EFO30764.1| flagellar basal-body rod protein FlgG [Roseibium sp. TrichSKD4] Length = 260 Score = 161 bits (407), Expect = 8e-38, Method: Composition-based stats. Identities = 43/258 (16%), Positives = 90/258 (34%), Gaps = 20/258 (7%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + +I A E+ + +++N++N T G++ +V F +++ Sbjct: 1 MKALHIAATGMKAQERNVEVISNNVANLRTTGYKRQRVDFQDLMYQNLRRAGSETSTAGT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q S V G+ TG +LD A+ G+ +F +E P TRDG F Sbjct: 61 IVPTGVQIGSGVKVAATSRIMSQGAVEQTGKDLDLAVRGEGFFQIEMPDGTTAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 + +G+LV+ G V + + + + L Sbjct: 121 ERDPNGTLVTVDGYTVVPGITIPEDSRNITISTDGTVSAVDAGGATVNLGQIQLARFVNK 180 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFN 221 G ++ P + + V++ FLE +N +++ E+ +I + + Sbjct: 181 AGLEAIGDNLFYETEASGPAQVDNPGGNGFGNVQQYFLEMANVDAVTEIADLISAQRAYE 240 Query: 222 SITTLIDENEKSMLEAIR 239 + +I ++ Sbjct: 241 MNSRVIKAADEMYSTTSN 258 >gi|119384846|ref|YP_915902.1| flagellar basal body rod protein FlgF [Paracoccus denitrificans PD1222] gi|119374613|gb|ABL70206.1| flagellar basal body rod protein [Paracoccus denitrificans PD1222] Length = 238 Score = 161 bits (407), Expect = 8e-38, Method: Composition-based stats. Identities = 61/241 (25%), Positives = 114/241 (47%), Gaps = 5/241 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + L Q L + + TVA+N++N +T GFR V FSE + + + ++ Sbjct: 1 MDNAIYAALTRQSGLMREMHTVANNIANANTTGFRREGVVFSEYMVPLDRR-GETLAMAN 59 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + G T + D A++G+ + +++P+G LTR G F +G LV+ G Sbjct: 60 GRGRMIDLGPGGMTQTNGQFDLAIDGEGFLMVQTPQGNRLTRAGAFMTNAEGELVNPDG- 118 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 + +LD + PI IP +G G IS G + +G+++ + P Sbjct: 119 HQLLDDGAAPIVIPAGVGSIGIGADGTISADGNPVGRVGVFASPDPARLRHEAGTLFDPG 178 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 PLE +++GFLEDSN + + E+ +MI + + + + +D+ ++ + + I + Sbjct: 179 GAVDPLEG---AVLRQGFLEDSNVDPVQEIARMIEVQRAYQLGQSFLDQEDQRIRQTITS 235 Query: 241 I 241 + Sbjct: 236 L 236 >gi|114765244|ref|ZP_01444376.1| Flagellar basal body rod protein [Pelagibaca bermudensis HTCC2601] gi|114542379|gb|EAU45407.1| Flagellar basal body rod protein [Roseovarius sp. HTCC2601] Length = 261 Score = 161 bits (406), Expect = 8e-38, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 97/261 (37%), Gaps = 22/261 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + I +A + + +++N++N +T GF++ + F++++ ++ Sbjct: 1 MKALGIAATGMMAQQTNVDVISNNIANANTTGFKSARASFTDLIYENQSREGAVTAEEGT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 V S G T ++LD A++G +F + P TRDG F Sbjct: 61 TRPIGLDIGLGVRSVGTLRLNTQGGLTQTESQLDLAIDGRGYFTVNLPDGDQAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQI-PQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 +++ +G +V+ G + + E V E + + L + Sbjct: 121 RLSAEGQIVNHQGFEIDPGVVLPDNTTAVEISETGIVSAYVEGDPIPVEVGQLTLTTFVN 180 Query: 166 SQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G N+ + + D +++G+LE SN + + ++ +I + + Sbjct: 181 DAGMRPLGNNLLEATVASGDAIPALPGDAGVGILRQGYLEASNVDIIRQITDLIQAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + I+ ++ M A I Sbjct: 241 EMNSKAIETADQMM-SAANQI 260 >gi|260774940|ref|ZP_05883841.1| flagellar basal-body rod protein FlgG [Vibrio coralliilyticus ATCC BAA-450] gi|260609195|gb|EEX35353.1| flagellar basal-body rod protein FlgG [Vibrio coralliilyticus ATCC BAA-450] Length = 262 Score = 161 bits (406), Expect = 9e-38, Method: Composition-based stats. Identities = 47/262 (17%), Positives = 96/262 (36%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + + A + +ST+++N++N TVG++ + F ++ N + Sbjct: 1 MHPALWVSKTGLDAQQTNISTISNNLANASTVGYKKSRAVFEDLFYQNINQPGGQSSQNT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + G+ +T LD +EGD +F + P I +R+G+F Sbjct: 61 ELPSGLMLGAGSKVVATQKVHTQGNTQTTNNSLDMMIEGDGFFQILMPDGNIGYSRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD--EIFNVGEKGEISQKGKVIATMGLYSVD 164 V D+G +V++ YP+ ++P V + Q +V+ + Sbjct: 121 TVNDEGVVVTSGAGYPLEPEIAIPEDAISITIGTDGEVSVRVRGQQDNQVVGQIATVDFV 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + P ++ +++ LE SN N E+ MI + Sbjct: 181 NPGGLEPIGQNLYLPTGASGDPQEGVPGFDGFGDIRQSMLETSNVNVTEELVNMIEAQRV 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I +K M + + Sbjct: 241 YEMNSKVISAVDKMMSFVNQQL 262 >gi|163750568|ref|ZP_02157806.1| flagellar basal-body rod protein FlgG [Shewanella benthica KT99] gi|161329723|gb|EDQ00712.1| flagellar basal-body rod protein FlgG [Shewanella benthica KT99] Length = 262 Score = 161 bits (406), Expect = 9e-38, Method: Composition-based stats. Identities = 43/262 (16%), Positives = 95/262 (36%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 MQ + I A + +S +++N++N T+G++ + F +++ N Sbjct: 1 MQAALWISKTGLDAQQTNISVISNNLANASTIGYKKSRAVFEDLLYQTVNQAGGISASNT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 + G+ ++T LD +EG +F ++ P G TR+G+F Sbjct: 61 KLPNGLNIGAGTKVVATQKVFTQGNMLTTDNSLDMMIEGPGFFEIQLPDGTAAYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVG--EKGEISQKGKVIATMGLYSVD 164 + D G +V++ Y V ++P K + + +V+ + + Sbjct: 121 TLDDTGQIVTSGSGYVVQPAITIPDNATSITVSAEGEVSVKMPGTIENQVVGQLSMSDFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + +++G LE SN N E+ +I + Sbjct: 181 NPSGLDPMGQNLYLETGASGTPIQGTASLDGMGAIRQGALETSNVNVTEELVNLIQSQRI 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I ++ + +N+ Sbjct: 241 YEMNSKVISAVDQMLSYVNQNL 262 >gi|90579911|ref|ZP_01235719.1| putative polar flagellar FlgG [Vibrio angustum S14] gi|90438796|gb|EAS63979.1| putative polar flagellar FlgG [Vibrio angustum S14] Length = 262 Score = 161 bits (406), Expect = 9e-38, Method: Composition-based stats. Identities = 47/262 (17%), Positives = 96/262 (36%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + + A + +ST+++N++N TVGF+ + F ++ N + Sbjct: 1 MHPALWVSKTGLDAQQTNISTISNNLANASTVGFKKGRAVFEDLFYQNINQPGGQSTQDT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + G+ +T +D +EGD +F + P I TR+G+F Sbjct: 61 TLPTGLMLGAGSKVVATQKVFTQGNTQTTNNAMDMMIEGDGFFQVLLPDGNIGYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD--EIFNVGEKGEISQKGKVIATMGLYSVD 164 + +G LV++ YPV VP V + Q+ +V+ + Sbjct: 121 TINSEGQLVTSGSGYPVQPEIVVPDDAVGITVGTDGEVSARIRGEQENQVLGQITTVDFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + P ++ ++++ LE SN N E+ MI + Sbjct: 181 NPGGMEPIGQNLFLPTGASGDPQEGTPGLEGYGSIRQSMLETSNVNVTEELVNMIEAQRV 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I ++ + + + Sbjct: 241 YEMNSKVISTVDQMLSYVNQQL 262 >gi|89075497|ref|ZP_01161908.1| putative polar flagellar FlgG [Photobacterium sp. SKA34] gi|89048769|gb|EAR54340.1| putative polar flagellar FlgG [Photobacterium sp. SKA34] Length = 262 Score = 161 bits (406), Expect = 9e-38, Method: Composition-based stats. Identities = 47/262 (17%), Positives = 96/262 (36%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + + A + +ST+++N++N TVGF+ + F ++ N + Sbjct: 1 MHPALWVSKTGLDAQQTNISTISNNLANASTVGFKKGRAVFEDLFYQNINQPGGQSTQDT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + G+ +T +D +EGD +F + P I TR+G+F Sbjct: 61 TLPTGLMLGAGSKVVATQKVFTQGNTQTTNNAMDMMIEGDGFFQVLLPDGNIGYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD--EIFNVGEKGEISQKGKVIATMGLYSVD 164 + +G LV++ YPV VP V + Q+ +V+ + Sbjct: 121 TINSEGQLVTSGSGYPVQPEIVVPEDAVGITVGTDGEVSARIRGEQENQVLGQITTVDFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + P ++ ++++ LE SN N E+ MI + Sbjct: 181 NPGGMEPIGQNLFLPTGASGDPQEGTPGLEGYGSIRQSMLETSNVNVTEELVNMIEAQRV 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I ++ + + + Sbjct: 241 YEMNSKVISTVDQMLSYVNQQL 262 >gi|91204384|emb|CAJ70884.1| strongly similar to flagellar hook protein [Candidatus Kuenenia stuttgartiensis] Length = 250 Score = 161 bits (406), Expect = 9e-38, Method: Composition-based stats. Identities = 65/240 (27%), Positives = 103/240 (42%), Gaps = 4/240 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + G + + + +A N++N +TVG++ F V KN + Sbjct: 9 MISGLYTGATNMMGQGEYQAVIARNLANVNTVGYKKNIAVFESFVAGAKNQAKEASEGTG 68 Query: 61 SG--KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSAS 118 S K G TG ELD A++GD +F +++ GI TR G+F ++ D ++V+ Sbjct: 69 SSLGKVATDFSPGVMQFTGNELDLAIKGDGFFEVQTKAGIAYTRSGQFMLSRDRTVVTPE 128 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178 G L + PIQIP K + F G +S GK I+ + + + G S Sbjct: 129 GW--PLMSSGGPIQIPAKAQSFTFKTDGSVSVDGKTISKLNIVNFLNPDGLTSIGGSAYV 186 Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 + P V + +G+LE SN N + EM MI + F S D S+ + I Sbjct: 187 ASDKANPTTADGTVEIAQGYLEKSNVNVIDEMVNMIANMRSFQSGNKSTDSINDSLKKLI 246 >gi|332162899|ref|YP_004299476.1| Lateral flagellar rod protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318604254|emb|CBY25752.1| flagellar basal-body rod protein FlgG [Yersinia enterocolitica subsp. palearctica Y11] gi|325667129|gb|ADZ43773.1| Lateral flagellar rod protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330863349|emb|CBX73472.1| flagellar basal-body rod protein flgG [Yersinia enterocolitica W22703] Length = 261 Score = 161 bits (406), Expect = 9e-38, Method: Composition-based stats. Identities = 42/261 (16%), Positives = 91/261 (34%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + +++ +++N++N +T GF+ +V F ++ + Sbjct: 1 MNPALWVSKTGLAAQDAKMNAISNNLANVNTDGFKRDRVVFEDLFYQNQRTPGAPLDQNN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106 Q S V VG+ T +LD A+ G +F +E+ G+ TR G Sbjct: 61 ATPNGIQFGSGVKVVGTQKQFTVGNIKVTKGDLDVAIAGQGFFQVETSDGGLAYTRAGNL 120 Query: 107 KVTDDGSLVSASGKY-PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 + DG L +A G + + V + + + + L + Sbjct: 121 SINADGVLTNAQGLPLIPQIELPAGAKDLAIGKDGTVTARLGGDAESAELGQITLVNFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + ++ G LE SN + EM MI + + + Sbjct: 181 PAGLEAVGGNMYKETVASGAAVEGVAGEEAFGQLEHGSLEGSNVQVVEEMVDMITVQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 ++ + + + + Sbjct: 241 EMNAKMVSAADDMLKFVTQKL 261 >gi|126734107|ref|ZP_01749854.1| flagellar basal-body rod protein FlgG [Roseobacter sp. CCS2] gi|126716973|gb|EBA13837.1| flagellar basal-body rod protein FlgG [Roseobacter sp. CCS2] Length = 261 Score = 161 bits (406), Expect = 9e-38, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 98/259 (37%), Gaps = 21/259 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + I A A + R+ +++N++N +T G+ + +F+++ Sbjct: 1 MRALKIAAAGMTAQQMRVEVISNNLANMNTTGYNPRRAEFADLHYQQLVRPGTINASDGT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q V + G+ +TG +LD A+EGD + + P TRDG Sbjct: 61 VLPTGIQLGLGVRPSAISVMLSQGALGATGGDLDLAIEGDGYLEVTLPSGASAYTRDGAL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE-KGEISQKGKVIATMGLYSVDM 165 K+T DG +V++ G V D+ + +++ L Sbjct: 121 KLTGDGLIVTSDGYPVVPDLTVPRDTRSLSINAEGEVFGYFIDEIQPQLLGQFSLAGFTN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 ++G ++ P + +++G+LEDS+ + + E+ +I + + Sbjct: 181 AKGLEAIGSNLFLETPASGPSVVGTPGEDGLGVLRQGYLEDSSVDPVREVTDLIEAQRGY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + +I ++ + ++ Sbjct: 241 ELNSKVITAADQMLSAMVQ 259 >gi|330447905|ref|ZP_08311553.1| flagellar basal-body rod protein FlgG [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328492096|dbj|GAA06050.1| flagellar basal-body rod protein FlgG [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 261 Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats. Identities = 41/261 (15%), Positives = 97/261 (37%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M ++ + A + +++ +++N++N +TVGF+ +V F ++ +I+ Sbjct: 1 MHSALWVSKTGMAAQDTKMTAISNNLANVNTVGFKRDRVVFEDLFYSIQRQPGAQVDQLN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106 Q S V G+ +T +LD A+ G +F +E+ ++ +R+G+F Sbjct: 61 QLPSGVQLGSGVRVVGTQKVFTQGNSQNTQQQLDLAVMGSGFFQIENSDGQVMYSRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165 V +G +V+ G + + + + + + + L Sbjct: 121 HVNSEGLMVNGQGLPLQPQIQIPEEANSISIGVDGIVTATLAGDPEPQELGQITLAKFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + ++ ++K+G LE SN + EM MI + + Sbjct: 181 PAGLEAVGGNLYKETQASGQAQEIIAGTDGAGSLKQGALEGSNVQVVEEMVDMITTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 ++ + + + + Sbjct: 241 EMNAKVVSAADDMLKFVAQAV 261 >gi|269103188|ref|ZP_06155885.1| flagellar basal-body rod protein FlgG [Photobacterium damselae subsp. damselae CIP 102761] gi|268163086|gb|EEZ41582.1| flagellar basal-body rod protein FlgG [Photobacterium damselae subsp. damselae CIP 102761] Length = 262 Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats. Identities = 47/262 (17%), Positives = 96/262 (36%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + + A + +ST+++N++N TVGF+ + F ++ N + Sbjct: 1 MHPALWVSKTGLDAQQTNISTISNNLANASTVGFKKGRAVFEDLFYQNINQPGGQATQDS 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 + G+ +T +D +EGD +F + P G + TR+G+F Sbjct: 61 TLPTGLMLGAGSKVVATQKVFTQGNTQTTNNAMDMMIEGDGFFQILLPDGNMGYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD--EIFNVGEKGEISQKGKVIATMGLYSVD 164 + +G LV+ Y V VP V + Q+ +V+ + Sbjct: 121 TINAEGQLVTTGSGYVVQPEIVVPEDAVGITVGTDGEVSARIRGQQENQVLGQLTTVDFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + P ++ + T+++ LE SN N E+ MI + Sbjct: 181 NPGGLEPIGQNLFLPTGASGDAQEGTPGLDGLGTIRQSMLETSNVNVTEELVNMIEAQRV 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I ++ + + + Sbjct: 241 YEMNSKVISTVDQMLSYVNQQL 262 >gi|89068731|ref|ZP_01156117.1| hypothetical protein OG2516_06821 [Oceanicola granulosus HTCC2516] gi|89045694|gb|EAR51756.1| hypothetical protein OG2516_06821 [Oceanicola granulosus HTCC2516] Length = 261 Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats. Identities = 50/258 (19%), Positives = 97/258 (37%), Gaps = 23/258 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + I LA + + +++N++N +T GF++ + F +++ Sbjct: 1 MKALGIATTGMLAQQTNVDVISNNIANANTTGFKSSRAAFQDLIYQNVAREGALTAEDGT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 V + G I+TG +LD A++G +FA+ P TRDG F Sbjct: 61 VRPTGVDIGLGVQTVGTVRLNTQGGLIATGNDLDLAIDGPGYFAVNLPDGSQGYTRDGGF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIP-QKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V +G LV+ G + + + +E V E + + L + Sbjct: 121 RVNAEGQLVNLQGHEIDPGLVIPELTTKVEINESGVVMAYVENDPAPVELGQLTLTTFMN 180 Query: 166 SQGFVRRENSGI------SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G N+ +P P E +++G LE SN N + ++ +I + Sbjct: 181 DSGLRPVGNNLFLQSEASGEPVPAVPGEPG-IGIIRQGHLEGSNVNIIQQITDLIAAQRA 239 Query: 220 FNSITTLIDENEKSMLEA 237 + + I+ ++ M A Sbjct: 240 YEMNSKAIETADQMMNTA 257 >gi|118588711|ref|ZP_01546119.1| Flagellar basal-body rod FlgG [Stappia aggregata IAM 12614] gi|118438697|gb|EAV45330.1| Flagellar basal-body rod FlgG [Stappia aggregata IAM 12614] Length = 260 Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats. Identities = 45/258 (17%), Positives = 90/258 (34%), Gaps = 20/258 (7%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + +I A E + +++N++N T GF+ + F +++ + Sbjct: 1 MKALHIAATGMKAQELNVEVISNNVANMRTTGFKKQRADFQDLLYQNLRRMGTETSDSGT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q S V GS TG ELD A+ G+ +F ++ P TRDG F Sbjct: 61 IVPTGIQIGSGVKIAATGRIMSQGSLEQTGKELDLAIRGEGFFQIDMPDGTTAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 + +G LV+ G + V + + + + + L Sbjct: 121 ERDANGQLVTIDGYSVNPGITIPQTVKDVTISNTGVVQGVDQAGNTVQLGQIQLARFVNK 180 Query: 167 QGFVRRENSGISPNIPPTPLEDLS-----GVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221 G ++ E + TV++ FLE +N +++ E+ +I + + Sbjct: 181 AGLEAIGDNLYLETDASGAPETSNPGDESYGTVQQYFLEMANVDAVTEIADLISAQRAYE 240 Query: 222 SITTLIDENEKSMLEAIR 239 + +I ++ Sbjct: 241 MNSQIIQAADEMYSTTTN 258 >gi|261211320|ref|ZP_05925608.1| flagellar basal-body rod protein FlgG [Vibrio sp. RC341] gi|260839275|gb|EEX65901.1| flagellar basal-body rod protein FlgG [Vibrio sp. RC341] Length = 262 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 46/262 (17%), Positives = 96/262 (36%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 MQ + + A + ++T+++N++N T+GF+ + F ++ N + Sbjct: 1 MQPALWVSKTGLDAQQTNITTISNNLANASTIGFKKGRAVFEDLFYQNINQPGAQSSQNT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + G+ +T LD +EGD +F + P I +R+G+F Sbjct: 61 RLPSGLMLGAGSKVVATQKVHTHGNAQTTSNSLDMMIEGDGFFQILMPDGNIAYSRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD--EIFNVGEKGEISQKGKVIATMGLYSVD 164 + D+G++V++ Y + +P V + Q +V+ + Sbjct: 121 TLDDEGAIVTSGSGYRLQPEIIIPEDAISITIGNDGEVSVRVRGQQDNQVLGQITTVDFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + P ++ V++ LE SN N E+ MI + Sbjct: 181 NPGGLEPIGQNLYLPTGASGEPQEGVPGLDGLGDVRQSMLETSNVNVTEELVNMIEAQRV 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I +K M + + Sbjct: 241 YEMNSKVISAVDKMMSFVNQQL 262 >gi|238762358|ref|ZP_04623329.1| Lateral flagellar rod protein (FlgG-like) [Yersinia kristensenii ATCC 33638] gi|238699343|gb|EEP92089.1| Lateral flagellar rod protein (FlgG-like) [Yersinia kristensenii ATCC 33638] Length = 261 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 89/261 (34%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + I A + +++ +++N++N +T GF+ +V F ++ + Sbjct: 1 MNPALWISKTGLAAQDAKMNAISNNLANVNTDGFKRDRVVFEDLFYQNQRSPGSPLNQNT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q S V VG+ T E D A+ G +F +E+ G+ TR G Sbjct: 61 ATPNGIQFGSGVKVVGTQKQFTVGNIKVTKGEFDVAIAGQGFFQIETADGGLAYTRAGNL 120 Query: 107 KVTDDGSLVSASGKY-PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 + DG L +A G + V + + + + L + Sbjct: 121 SINADGVLTNAQGMPLIPQIELPAGANDLAIGKDGTVTARLGGEAEPAELGQITLVNFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + ++ G LE SN + EM MI + + + Sbjct: 181 PAGLEAVGGNMYKETVASGTAVEGVPGEEAFGQLEHGSLEGSNVQVVEEMVDMITVQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 ++ + + + + Sbjct: 241 EMNAKMVSAADDMLKFVTQKL 261 >gi|329929265|ref|ZP_08283018.1| flagellar hook-basal body protein [Paenibacillus sp. HGF5] gi|328936634|gb|EGG33077.1| flagellar hook-basal body protein [Paenibacillus sp. HGF5] Length = 274 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 47/271 (17%), Positives = 97/271 (35%), Gaps = 32/271 (11%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ + +L + +N++N +TVGF+ +V F +++ + + Sbjct: 1 MLRSMYSGISGMRGFQTKLDVIGNNIANVNTVGFKAGRVMFKDILSQTMSGVTPGTDDPS 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI---ILTRDG 104 Q V+ G GS ++T D ++GD +F ++ LTR G Sbjct: 61 GGVNAKQIGLGVSIGSIDTLHTPGSAMTTNNPTDLRIDGDGFFMVKLSEDQEVPFLTRAG 120 Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI----ATMGL 160 F V +LV++ G + + I + A +G+ Sbjct: 121 DFHVDVARNLVTSDGMLVLDSAGDPIQLDEEVTAFTIAQNGAIIQKMSDGTTEEGAIIGV 180 Query: 161 YSVDMSQGFVRRENSGISPNIPPTP------------LEDLSGVTVKRGFLEDSNANSMY 208 + +G + + + P + + G LE SN + Sbjct: 181 AKIPNPEGLEKIGGNMYRVTLNAVPDGDLAAVMFDGNNAEEGTGAIIAGQLEMSNVDLTG 240 Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E +MI + F + + +I +++ + E + Sbjct: 241 EFSEMIVAQRGFQANSRIITTSDEVLQEVVN 271 >gi|77464905|ref|YP_354409.1| flagellar basal body rod protein FlgF [Rhodobacter sphaeroides 2.4.1] gi|77389323|gb|ABA80508.1| putative flagellar basal body rod protein [Rhodobacter sphaeroides 2.4.1] Length = 239 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 62/242 (25%), Positives = 109/242 (45%), Gaps = 6/242 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + L Q L + + +VA+N++N T GFR + F+E V ++ + ++ + Sbjct: 1 MDAAGYTTLTRQSGLMREMQSVANNIANLSTTGFRREGIVFTEHVKRLEGEASLSMASAS 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + + + G TG DFA+ G+ +F +E+P+G LTR G F +G LV A G Sbjct: 61 ARQ--IDLTQGGLTHTGAPFDFAIMGEGFFLIETPQGQELTRAGSFTPNAEGELVDADGN 118 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 LD + P+ IP + G +S + I +GL+ G + S Sbjct: 119 RL-LDAGAAPLFIPPDARGVVLSADGTLSAGDQPIGRVGLWQPTDPLGLRHEGGTRFSAE 177 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 P E T+ +G LEDSN + E+ +MI + + + + +D + + +R Sbjct: 178 GGTEPAEG---ATLVQGALEDSNVEPVSEIARMIEVQRAYEMGQSFLDREDDRIRTTVRT 234 Query: 241 IA 242 + Sbjct: 235 LG 236 >gi|157376214|ref|YP_001474814.1| flagellar basal body rod protein FlgG [Shewanella sediminis HAW-EB3] gi|157318588|gb|ABV37686.1| flagellar basal-body rod protein FlgG [Shewanella sediminis HAW-EB3] Length = 262 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 42/262 (16%), Positives = 94/262 (35%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + I A + +S +++N++N TVG++ + F +++ N Sbjct: 1 MHPALWISKTGLDAQQTDISVISNNVANASTVGYKKSRAVFEDLLYQTVNQAGGVSASNT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 + G+ ++T +D +EG +F ++ P G TR+G+F Sbjct: 61 KLPNGLNIGAGTKVVATQKVFTQGNMLTTDNSMDLMVEGPGFFEIQLPDGTAAYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE--KGEISQKGKVIATMGLYSVD 164 + D G +V+ Y V ++P K + + +V+ + + Sbjct: 121 TLDDTGQIVTPGSGYVVQPAITIPENATGITVSAEGEVSVKTPGTAESQVVGQLSMTDFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + + +++G LE SN N E+ +I + Sbjct: 181 NPSGLDPMGQNLYTETGASGTPIQGTASLDGMGAIRQGALETSNVNVTEELVNLIESQRI 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I ++ + +N+ Sbjct: 241 YEMNSKVISAVDQMLSYVNQNL 262 >gi|261856358|ref|YP_003263641.1| flagellar basal-body rod protein FlgG [Halothiobacillus neapolitanus c2] gi|261836827|gb|ACX96594.1| flagellar basal-body rod protein FlgG [Halothiobacillus neapolitanus c2] Length = 262 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 42/257 (16%), Positives = 90/257 (35%), Gaps = 20/257 (7%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID---------- 53 + I A + R+S +++N++N +T GF+ + F +++ + Sbjct: 5 ALWIAKTGLDAQQTRMSVISNNLANVNTTGFKQDRAVFEDLIYQNYRQVGAANTQQNEVP 64 Query: 54 ---QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVT 109 + V + G+ ++T LD A+ G +F + P + TRDG F + Sbjct: 65 TGLNIGTGVKVVATEKNHTQGNLVTTNNALDLAINGRGFFQVLQPDGSVAYTRDGSFSLD 124 Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDMSQG 168 +G +V+A+G + + + T+ L G Sbjct: 125 SNGQVVTANGYPLQPAITVPQGAQSITVGKDGTVSVQLAGQAQPSQVGTIDLADFVNPAG 184 Query: 169 FVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223 ++ + + + +++G LE SN N + E+ MI + + Sbjct: 185 LQPIGDNLFLESGSSGAPQTSTPGLNGVGNMQQGMLESSNVNVVEELVSMIETQRAYEMN 244 Query: 224 TTLIDENEKSMLEAIRN 240 + I + +N Sbjct: 245 SKAISATSSMLQTLNQN 261 >gi|121601652|ref|YP_989405.1| putative flagellar basal-body rod protein FlgF [Bartonella bacilliformis KC583] gi|120613829|gb|ABM44430.1| putative flagellar basal-body rod protein FlgF [Bartonella bacilliformis KC583] Length = 244 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 76/242 (31%), Positives = 132/242 (54%), Gaps = 1/242 (0%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 MQ +G++ Q++L +R+ T+A NM+N +T GFR +KF +V I + ++ F + Sbjct: 1 MQNPIYVGVSGQISLARRMETIAQNMANVNTPGFRAGGMKFDTLVSPIAQEQGDRVFFTS 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 +GK Y+S E GS TG LD A G+++F++E+ G++ TRDGR +T +G LVS +G Sbjct: 61 AGKGYISTERGSLEQTGNALDVAATGNSYFSMEASFGVVYTRDGRMTMTPEGMLVSVTG- 119 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 P LD PIQ+ +G G I Q + +GLY N+ + P+ Sbjct: 120 LPFLDDGGAPIQLNPVGGAPRIGADGSIYQGNVLAGRIGLYQFQPGTQLRYGPNASVIPD 179 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 +E +G V +G++E SN N + EM ++I +++ F + ++ + E+ ++I+ Sbjct: 180 RAAIQIEGGTGDGVMQGYVESSNVNGVAEMTRLIEVSRAFERVEAMLRQQEEMRSKSIQI 239 Query: 241 IA 242 + Sbjct: 240 LG 241 >gi|116328474|ref|YP_798194.1| endoflagellar distal basal body rod protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116331206|ref|YP_800924.1| endoflagellar distal basal body rod protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116121218|gb|ABJ79261.1| Endoflagellar distal basal body rod protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116124895|gb|ABJ76166.1| Endoflagellar distal basal body rod protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 287 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 49/285 (17%), Positives = 103/285 (36%), Gaps = 44/285 (15%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKF------------SEVVGAI 48 M G + + R+ +++N++N D F+ F + VG + Sbjct: 1 MLRGMYTGANGMIIQQTRMDVISNNLANVDKTAFKRDTTVFKTFPELLLHRFDEDGVGKV 60 Query: 49 KND-------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA------WFALESP 95 + + + Y E G+ T D L+ +F++ + Sbjct: 61 PMGSFDTAPVVGKLGLGGEVNEVYTRFEQGAVKKTENPFDIMLQDRPGNEHPAFFSVMTN 120 Query: 96 RGIILTRDGRFKVTDDGSLVSASGKYPVLDMASV-----PIQIPQKDEIFNVGEKGEISQ 150 RG L+R G F + +G LV+ G + + + I + E++ GE G + Sbjct: 121 RGERLSRSGAFVMDTNGYLVTPQGFPLMGENGPIRVARGNFLIKENGEVWINGEIGNDPR 180 Query: 151 KGKVIATMGL-----------YSVDMSQGFVRRENSGISPN---IPPTPLEDLSGVTVKR 196 G + +V+ + + +S + PTP E ++ + Sbjct: 181 NGTSLDKNRFETPVLLDRLKIRTVENPRHLDKEGDSFYADTPESGEPTPFELKDEPSILQ 240 Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 G+LE SN + + EM +MI + + + + + + + + I + Sbjct: 241 GYLEASNVSVVTEMVEMIEVNRSYEANQKTVQTQDSLLGKLINEV 285 >gi|304404253|ref|ZP_07385915.1| fagellar hook-basal body protein [Paenibacillus curdlanolyticus YK9] gi|304347231|gb|EFM13063.1| fagellar hook-basal body protein [Paenibacillus curdlanolyticus YK9] Length = 272 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 49/269 (18%), Positives = 97/269 (36%), Gaps = 30/269 (11%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ + +L + +N++N +TVGF+ +V F +++ + Sbjct: 1 MLRSMYSGVSGMRGFQTKLDVIGNNIANVNTVGFKAGRVMFKDILSQNVAGVTAPEEGAK 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI---ILTRDG 104 Q VA GS ++T D ++GD +FA+++ LTR G Sbjct: 61 GGVNAKQVGLGVAIAAIDTLHTAGSAMTTNVPTDVRIDGDGFFAVKTSPEQEVPYLTRAG 120 Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM-----G 159 F + LV+A G + + + + + IS A G Sbjct: 121 NFYLDASRQLVTADGAFVLAEGGEPIVLDEGVTSFSIAQDGSIISINADGTAEPTDFKIG 180 Query: 160 LYSVDMSQGFVRRENSGISPN---------IPPTPLEDLSGVTVKRGFLEDSNANSMYEM 210 + V G + ++ + + + G LE SN + E Sbjct: 181 VVKVVNPSGLEKVGSNMYRVTPNANLEDIEVGSANNAETGTGAIIAGQLEMSNVDLTSEF 240 Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +MI + F + + +I +++ + E + Sbjct: 241 TEMIIAQRGFQANSRIITTSDEVLQEVVN 269 >gi|170725957|ref|YP_001759983.1| flagellar basal body rod protein FlgG [Shewanella woodyi ATCC 51908] gi|169811304|gb|ACA85888.1| flagellar basal-body rod protein FlgG [Shewanella woodyi ATCC 51908] Length = 262 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 43/262 (16%), Positives = 95/262 (36%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + I A + +S +++N++N TVG++ + F +++ N Sbjct: 1 MHPALWISKTGLDAQQTDISVISNNVANASTVGYKKSRAVFEDLLYQTVNQAGGVSASNT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 + G+ ++T LD +EG +F ++ P G TR+G+F Sbjct: 61 KLPNGLNVGAGTKVVATQKVFTQGNMLTTDNSLDLMVEGPGFFEIQLPDGTAAYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI--SQKGKVIATMGLYSVD 164 + D G +V++ Y V ++P + + + +V+ + + Sbjct: 121 TLDDTGQIVTSGSGYVVQPAITIPENATGITVSAEGEVSVKTAGTAESQVVGQLTMSDFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + + V++G LE SN N E+ +I + Sbjct: 181 NPSGLDPMGQNLYTETGASGTPIQGTASLDGMGAVRQGALETSNVNVTEELVNLIESQRI 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I ++ + +N+ Sbjct: 241 YEMNSKVISAVDQMLSYVNQNL 262 >gi|309388845|gb|ADO76725.1| flagellar basal-body rod protein FlgF [Halanaerobium praevalens DSM 2228] Length = 250 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 56/251 (22%), Positives = 103/251 (41%), Gaps = 12/251 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGA------IKND 51 M ++ LE++ + ++N++N +T GF+ + F E++ + Sbjct: 1 MIRGLYTAASSMGVLEKKTNIRSNNLANVNTNGFKKSEAITASFPEMLLSKIEADKADQQ 60 Query: 52 IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDD 111 I + + + G F T LDFA+EG +F +E+ G +RDG F + D Sbjct: 61 IGSLATGAYLERSFKDMSQGDFKRTDNALDFAIEGSGFFVIETENGEKYSRDGNFTINAD 120 Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171 L++ SG LD IQI + E G A +GL + + Sbjct: 121 SELITQSGNNV-LDSNGNRIQIIPDQDFRVSAEGQITFNNGLQGAQIGLVDFENEAELAQ 179 Query: 172 RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 ++ P+ S + +G++E SN + EM +MI T+ + S +I + Sbjct: 180 TGDNLYELQGETEPI--ASQAGIAQGYVEGSNVQIVEEMAKMIKTTRHYESNQKVISSID 237 Query: 232 KSMLEAIRNIA 242 +S+ + I + Sbjct: 238 ESLNKVINEVG 248 >gi|90408062|ref|ZP_01216233.1| Flagellar basal body rod protein FlgG [Psychromonas sp. CNPT3] gi|90310819|gb|EAS38933.1| Flagellar basal body rod protein FlgG [Psychromonas sp. CNPT3] Length = 262 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 42/262 (16%), Positives = 97/262 (37%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + I A + ++T+++N++N TVGF+ + F +++ N Sbjct: 1 MHPALWISKTGLDAQQTNVATISNNLANASTVGFKKSRAIFEDLLYQNINQPGANATQNT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 + + G+ ++T LD ++G +F +E P G TR+G+F Sbjct: 61 KLPSGLMIGAGAKVVAVQKNFSQGNALTTKNSLDIMIDGRGFFEIEMPDGSSGYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQI--PQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 ++ +DG +V+ Y ++ +P V + + +V+ + + Sbjct: 121 QLNEDGIIVTPGSGYALMPQIQIPNDALSISVGSEGEVSVRIAGQVENQVVGQINVNDFV 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQK 219 G + + +++G LE SN N E+ +I + Sbjct: 181 NPSGLEPMGENLYTETGASGAPIQGVPGGDGLGFLRQGMLETSNVNVTEELVNLIESQRV 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I ++ + + + Sbjct: 241 YEMNSKVISAVDEMLSYVSQQL 262 >gi|294140187|ref|YP_003556165.1| flagellar basal-body rod protein FlgG [Shewanella violacea DSS12] gi|293326656|dbj|BAJ01387.1| flagellar basal-body rod protein FlgG [Shewanella violacea DSS12] Length = 262 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 42/262 (16%), Positives = 94/262 (35%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + I A + +S +++N++N T+G++ + F +++ N Sbjct: 1 MHPALWISKTGLDAQQTDISVISNNVANASTIGYKKSRAVFEDLLYQTVNQAGGISASNT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 + G+ ++T LD +EG +F ++ P G TR+G+F Sbjct: 61 KLPNGLNIGAGTKVVATQKVFTQGNMLTTDNSLDMMIEGPGFFEIQLPDGTAAYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE--KGEISQKGKVIATMGLYSVD 164 + D G +V++ Y V ++P K + + +V+ + + Sbjct: 121 TLDDTGQMVTSGSGYVVQPAITIPDNATSITVSAEGEVSVKTPGTIENQVVGQLSMSDFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + +++G LE SN N E+ +I + Sbjct: 181 NPSGLDPMGQNLYLETGASGTPIQGTASLDGMGAIRQGALETSNVNVTEELVNLIESQRI 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I ++ + +N+ Sbjct: 241 YEMNSKVISAVDQMLSYVNQNL 262 >gi|260574402|ref|ZP_05842406.1| flagellar basal-body rod protein FlgF [Rhodobacter sp. SW2] gi|259023298|gb|EEW26590.1| flagellar basal-body rod protein FlgF [Rhodobacter sp. SW2] Length = 236 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 63/242 (26%), Positives = 113/242 (46%), Gaps = 7/242 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + L Q L + + VA+N++N T GFR V F+E V + D + +S Sbjct: 1 MDAAGYTTLTRQSGLMREMQVVANNIANISTTGFRREGVVFAEYVKRM--DGEPSLSMAH 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + + S TG DFA++GD +F +E+P+G LTR G F + +G LV+ G Sbjct: 59 ATARNIDLGQASISQTGGAFDFAIQGDGFFLIETPQGQRLTRAGSFTPSAEGELVNPDG- 117 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 + +LD PI +P + + E G +S G+ +A +GL+ + + Sbjct: 118 FRLLDQGGAPIFVPPDAGVVGMSEDGTLSAGGQPLARVGLWQPTDPNTLRHQGGTLFEAG 177 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 +E + + +G++EDSN N + E+ +MI + + + +D + + I+ Sbjct: 178 A----MEPVEDGQILQGYIEDSNVNPISEIARMIEVQRAYELGQKFLDNEDARVRGVIQT 233 Query: 241 IA 242 + Sbjct: 234 LG 235 >gi|89072313|ref|ZP_01158892.1| putative flagellar basal-body rod protein [Photobacterium sp. SKA34] gi|89051845|gb|EAR57297.1| putative flagellar basal-body rod protein [Photobacterium sp. SKA34] Length = 261 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 44/261 (16%), Positives = 97/261 (37%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M ++ + A + +++ +++N++N +TVGF+ +V F ++ +I+ Sbjct: 1 MHSALWVSKTGMAAQDTKMTAISNNLANVNTVGFKRDRVVFEDLFYSIQRQPGAQVDQLN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q S V G+ +T +LD A+ G +F +E+ G + +R+G+F Sbjct: 61 QLPSGVQLGSGVRVVGTQKVFTQGNSQNTQQQLDLAVMGSGFFQIENSDGEVMFSRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165 V +G +V+ G + + + + + + + L Sbjct: 121 HVNSEGLMVNGQGLPLQPQIQIPEEANTISIGVDGIVTATLAGDPQPQELGQITLAKFIN 180 Query: 166 SQGFVRRENSGI-SPNIPPTPLED----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + P E ++K+G LE SN + EM MI + + Sbjct: 181 PAGLEAVGGNLYKETQASGQPQEMIAGIDGAGSLKQGALEGSNVQVVEEMVDMITTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 ++ + + + + Sbjct: 241 EMNAKVVSAADDMLKFVAQAV 261 >gi|83716996|ref|YP_438391.1| flagellar basal body rod protein FlgG [Burkholderia thailandensis E264] gi|167614839|ref|ZP_02383474.1| flagellar basal body rod protein FlgG [Burkholderia thailandensis Bt4] gi|257141424|ref|ZP_05589686.1| flagellar basal body rod protein FlgG [Burkholderia thailandensis E264] gi|83650821|gb|ABC34885.1| flagellar basal-body rod protein FlgG [Burkholderia thailandensis E264] Length = 262 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 48/259 (18%), Positives = 94/259 (36%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + I A + +L +A+N++N +T+GF+ +V F ++ I+ Sbjct: 1 MNQAMWISKTGLQAQDAKLQAIANNLANVNTIGFKRDRVVFEDLFYRIERQPGAQLDQDN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 Q S GS +TG LD A+ G + + G TR G+ Sbjct: 61 ASPSGIQMGSGTRIVGTQKIFTDGSVQTTGQSLDVAVMGKGFIQVLMANGETGYTRAGQL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 + +G LV+A G +++ E V + + + L + Sbjct: 121 SINAEGLLVNAQGLPLQPEISIPENATDIAIGENGIVAATMPGASSPSEVGQIQLANFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + ++ + P + T +K+G LE +N + EM MI + + Sbjct: 181 PAGLLALGDNLYMETVASGPPNEGEPGTDVFGKIKQGALEGANVQVVEEMVDMIAAQRTY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 T ++ + + + + Sbjct: 241 EMNTKVLSAADNMLQQLSQ 259 >gi|304397206|ref|ZP_07379085.1| flagellar basal-body rod protein FlgG [Pantoea sp. aB] gi|308186395|ref|YP_003930526.1| Flagellar basal-body rod protein flgG [Pantoea vagans C9-1] gi|304355355|gb|EFM19723.1| flagellar basal-body rod protein FlgG [Pantoea sp. aB] gi|308056905|gb|ADO09077.1| Flagellar basal-body rod protein flgG [Pantoea vagans C9-1] Length = 260 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 86/259 (33%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S I A + + +A+N++N T GF+ + F +++ + Sbjct: 1 MIRSLWIAKTGLDAQQMNMDVIANNLANVSTNGFKRSRAVFEDLMYQTMRQPGTQSSEQT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 + V G+ T D A+ G +F ++ P G TRDG F Sbjct: 61 TLPSGLQIGTGVRPVTTERLHTQGNLSQTSNSKDIAINGQGYFQIQMPDGTSAYTRDGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V +G LV+ SG + V + + + + L + Sbjct: 121 QVDQNGQLVTNSGFPVQPGITIPANATSITVSRDGVVSVTQQGQAQAAQVGQLTLSTFMN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + D + + +G+ E SN N E+ MI + + Sbjct: 181 DAGLDSVGENLYKETQASGAPTDSTPGQNGAGLLYQGYTETSNVNVAEELVTMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + I +++ + + + Sbjct: 241 EINSKAISTSDQMLAKLTQ 259 >gi|188582487|ref|YP_001925932.1| flagellar basal body rod protein FlgF [Methylobacterium populi BJ001] gi|179345985|gb|ACB81397.1| flagellar basal body rod protein [Methylobacterium populi BJ001] Length = 246 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 62/247 (25%), Positives = 117/247 (47%), Gaps = 9/247 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN-----DIDQK 55 MQ + +G++AQ AL + L +A+NM+N T GF+ +F E + + + D++ Sbjct: 1 MQNALFVGVSAQAALARELDVIANNMANVSTTGFKARSARFQEYLMPVASADSFQRSDRR 60 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115 +S+V L G G + AL GDA+ A+++P+G+ TR+G F++ G+LV Sbjct: 61 LSYVIDQGTPLDLTQGPVEPDGNPMHVALRGDAFLAVQTPQGVRYTRNGAFELNAQGNLV 120 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 ++ G D PI I Q++ ++ G +S + + L + Q + Sbjct: 121 TSDGYAVQGD--GGPITIGQQETGLSIAPDGTVSTNLGIRGRLRLVTFANPQALKSEGAN 178 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 S + P ++ G LE SN + EM +++ + + + ++++I + Sbjct: 179 LFSSDAPARAAGPGQH--LEPGALERSNVKPVVEMTRLMDVNRTYTMVSSVISRLDDLRG 236 Query: 236 EAIRNIA 242 AIR +A Sbjct: 237 TAIRRLA 243 >gi|126463747|ref|YP_001044861.1| flagellar basal body rod protein FlgF [Rhodobacter sphaeroides ATCC 17029] gi|126105411|gb|ABN78089.1| protein of unknown function DUF1078 domain protein [Rhodobacter sphaeroides ATCC 17029] Length = 239 Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 62/242 (25%), Positives = 109/242 (45%), Gaps = 6/242 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + L Q L + + +VA+N++N T GFR + F+E V ++ + ++ + Sbjct: 1 MDAAGYTTLTRQSGLMREMQSVANNIANISTTGFRREGIVFTEHVKRLEGEASLSMASAS 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + + + G TG DFA+ G+ +F +E+P+G LTR G F +G LV A G Sbjct: 61 ARQ--IDLTQGGLTRTGAPFDFAIMGEGFFLIETPQGQELTRAGSFTPNAEGELVDADGN 118 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 LD + P+ IP + G +S + I +GL+ G + S Sbjct: 119 RL-LDAGAAPLFIPPDARGVVLSADGTLSAGDQPIGRVGLWQPTDPLGLRHEGGTRFSAE 177 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 P E T+ +G LEDSN + E+ +MI + + + + +D + + +R Sbjct: 178 GGTEPAEG---ATLVQGALEDSNVEPVSEIARMIDVQRAYEMGQSFLDREDDRIRTTVRT 234 Query: 241 IA 242 + Sbjct: 235 LG 236 >gi|297530598|ref|YP_003671873.1| fagellar hook-basal body protein [Geobacillus sp. C56-T3] gi|297253850|gb|ADI27296.1| fagellar hook-basal body protein [Geobacillus sp. C56-T3] Length = 288 Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 50/285 (17%), Positives = 95/285 (33%), Gaps = 46/285 (16%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G+ A + +L + +N++N +T GF+ + F +++ + Sbjct: 1 MLRSMYSGIGAMRNFQTKLDVIGNNIANVNTYGFKKGRTIFKDLMSQTISGASGPNAGAG 60 Query: 54 -------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-----IILT 101 Q GS +TG LD A+ GD +F L + T Sbjct: 61 RGGTNPKQVGLGSQLAAIDTVHTQGSLQTTGRVLDLAISGDGFFILGELNNGNLINPLFT 120 Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVG-------------EKGEI 148 R G F + +G +V+A G Y V + ++ I + Sbjct: 121 RAGNFYLDKEGYIVNADGLYLVGEGYQNGAFTGKRARIQIPTDAKSVSIGADGVVNYVDA 180 Query: 149 SQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP--------------TPLEDLSGVTV 194 +V + L + G + + P ++ ++ Sbjct: 181 VGNLQVAGRIRLAKFPNNDGLEKVGGNLFRETANSGTIINPNNQNEWIAYPPQESGAGSI 240 Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G LE SN + E +MI + F + T +I +++ + E + Sbjct: 241 VSGALEMSNVDLAEEFTEMIVAQRGFQANTRIITTSDEILQELVN 285 >gi|268589980|ref|ZP_06124201.1| flagellar basal-body rod protein FlgG [Providencia rettgeri DSM 1131] gi|291314698|gb|EFE55151.1| flagellar basal-body rod protein FlgG [Providencia rettgeri DSM 1131] Length = 260 Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 84/259 (32%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + L +++N++N T GF+ + F +++ Sbjct: 1 MIRSLWIAKTGLDAQQTNLDVISNNLANVSTNGFKRQRAVFEDLMYQNIRQPGAMSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + G+ TG D A+ G + ++ P G TRDG Sbjct: 61 SLPSGLQMGTGSRPVATMRIHAQGALNKTGNTNDIAIRGQGFLHVQMPDGTDAYTRDGAL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 + DG LV++SG V + V + + I + L + Sbjct: 121 QPNQDGQLVTSSGYQIVPAIMIPDNANSLSIARDGTVTITVYGDNQPQQIGQITLTTFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + T + + LE SN N E+ MI + + Sbjct: 181 DAGLESMGENLYMETASSGAPNESAPGTNGAGLLYQNMLETSNVNVAEELVNMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +++ + + Sbjct: 241 EINSKAVSASDQMLQRLTQ 259 >gi|114562344|ref|YP_749857.1| flagellar basal body rod protein FlgG [Shewanella frigidimarina NCIMB 400] gi|114333637|gb|ABI71019.1| flagellar basal-body rod protein FlgG [Shewanella frigidimarina NCIMB 400] Length = 262 Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 44/262 (16%), Positives = 95/262 (36%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + I A + ++ +++N++N TVGF+ + F +++ N Sbjct: 1 MHPALWISKTGVDAQQTNIAVISNNVANASTVGFKKSRAVFEDLLYQTVNQAGGISSDNS 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 + G+ ++T LD +EG +F ++ P G TR+G+F Sbjct: 61 KLPNGLNIGAGTKVVATQKMFTQGNMLTTDNSLDLMIEGSGFFEVQMPDGTAAYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF--NVGEKGEISQKGKVIATMGLYSVD 164 + D G +V+ Y V ++P V + + +VI + + Sbjct: 121 SLDDTGQIVTPGSGYVVQPPITIPDDSTSITVSASGEVSVQTPGTAASQVIGQLTMTDFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + + ++++G LE SN N E+ +I + Sbjct: 181 NPAGLDPLGQNLYTETGASGTPIQGTASLDGLGSIRQGALETSNVNVTEELVNLIQGQRI 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I ++ + +N+ Sbjct: 241 YEMNSKVISAVDQMLSYINQNL 262 >gi|15642194|ref|NP_231826.1| flagellar basal body rod protein FlgG [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121586257|ref|ZP_01676047.1| flagellar basal-body rod protein FlgG [Vibrio cholerae 2740-80] gi|121726538|ref|ZP_01679787.1| flagellar basal-body rod protein FlgG [Vibrio cholerae V52] gi|147674573|ref|YP_001217712.1| flagellar basal body rod protein FlgG [Vibrio cholerae O395] gi|153213600|ref|ZP_01948873.1| flagellar basal-body rod protein FlgG [Vibrio cholerae 1587] gi|153817095|ref|ZP_01969762.1| flagellar basal-body rod protein FlgG [Vibrio cholerae NCTC 8457] gi|153820850|ref|ZP_01973517.1| flagellar basal-body rod protein FlgG [Vibrio cholerae B33] gi|153825330|ref|ZP_01977997.1| flagellar basal-body rod protein FlgG [Vibrio cholerae MZO-2] gi|153829351|ref|ZP_01982018.1| flagellar basal-body rod protein FlgG [Vibrio cholerae 623-39] gi|183179567|ref|ZP_02957778.1| flagellar basal-body rod protein FlgG [Vibrio cholerae MZO-3] gi|227082319|ref|YP_002810870.1| flagellar basal-body rod protein FlgG [Vibrio cholerae M66-2] gi|229507728|ref|ZP_04397233.1| flagellar basal-body rod protein FlgG [Vibrio cholerae BX 330286] gi|229512077|ref|ZP_04401556.1| flagellar basal-body rod protein FlgG [Vibrio cholerae B33] gi|229513839|ref|ZP_04403301.1| flagellar basal-body rod protein FlgG [Vibrio cholerae TMA 21] gi|229519213|ref|ZP_04408656.1| flagellar basal-body rod protein FlgG [Vibrio cholerae RC9] gi|229522144|ref|ZP_04411561.1| flagellar basal-body rod protein FlgG [Vibrio cholerae TM 11079-80] gi|229524190|ref|ZP_04413595.1| flagellar basal-body rod protein FlgG [Vibrio cholerae bv. albensis VL426] gi|229528800|ref|ZP_04418190.1| flagellar basal-body rod protein FlgG [Vibrio cholerae 12129(1)] gi|229607232|ref|YP_002877880.1| flagellar basal body rod protein FlgG [Vibrio cholerae MJ-1236] gi|254225803|ref|ZP_04919408.1| flagellar basal-body rod protein FlgG [Vibrio cholerae V51] gi|254849324|ref|ZP_05238674.1| flagellar basal-body rod protein FlgG [Vibrio cholerae MO10] gi|255747106|ref|ZP_05421051.1| flagellar basal-body rod protein FlgG [Vibrio cholera CIRS 101] gi|262161350|ref|ZP_06030460.1| flagellar basal-body rod protein FlgG [Vibrio cholerae INDRE 91/1] gi|262167779|ref|ZP_06035481.1| flagellar basal-body rod protein FlgG [Vibrio cholerae RC27] gi|262191687|ref|ZP_06049863.1| flagellar basal-body rod protein FlgG [Vibrio cholerae CT 5369-93] gi|297580841|ref|ZP_06942766.1| flagellar basal-body rod protein FlgG [Vibrio cholerae RC385] gi|298500427|ref|ZP_07010232.1| flagellar basal-body rod protein FlgG [Vibrio cholerae MAK 757] gi|9656751|gb|AAF95340.1| flagellar basal-body rod protein FlgG [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121549523|gb|EAX59549.1| flagellar basal-body rod protein FlgG [Vibrio cholerae 2740-80] gi|121630991|gb|EAX63370.1| flagellar basal-body rod protein FlgG [Vibrio cholerae V52] gi|124115799|gb|EAY34619.1| flagellar basal-body rod protein FlgG [Vibrio cholerae 1587] gi|125621709|gb|EAZ50038.1| flagellar basal-body rod protein FlgG [Vibrio cholerae V51] gi|126512363|gb|EAZ74957.1| flagellar basal-body rod protein FlgG [Vibrio cholerae NCTC 8457] gi|126521642|gb|EAZ78865.1| flagellar basal-body rod protein FlgG [Vibrio cholerae B33] gi|146316456|gb|ABQ20995.1| flagellar basal-body rod protein FlgG [Vibrio cholerae O395] gi|148875192|gb|EDL73327.1| flagellar basal-body rod protein FlgG [Vibrio cholerae 623-39] gi|149741014|gb|EDM55083.1| flagellar basal-body rod protein FlgG [Vibrio cholerae MZO-2] gi|183012978|gb|EDT88278.1| flagellar basal-body rod protein FlgG [Vibrio cholerae MZO-3] gi|227010207|gb|ACP06419.1| flagellar basal-body rod protein FlgG [Vibrio cholerae M66-2] gi|227014091|gb|ACP10301.1| flagellar basal-body rod protein FlgG [Vibrio cholerae O395] gi|229332574|gb|EEN98060.1| flagellar basal-body rod protein FlgG [Vibrio cholerae 12129(1)] gi|229337771|gb|EEO02788.1| flagellar basal-body rod protein FlgG [Vibrio cholerae bv. albensis VL426] gi|229341069|gb|EEO06074.1| flagellar basal-body rod protein FlgG [Vibrio cholerae TM 11079-80] gi|229343902|gb|EEO08877.1| flagellar basal-body rod protein FlgG [Vibrio cholerae RC9] gi|229349020|gb|EEO13977.1| flagellar basal-body rod protein FlgG [Vibrio cholerae TMA 21] gi|229352042|gb|EEO16983.1| flagellar basal-body rod protein FlgG [Vibrio cholerae B33] gi|229355233|gb|EEO20154.1| flagellar basal-body rod protein FlgG [Vibrio cholerae BX 330286] gi|229369887|gb|ACQ60310.1| flagellar basal-body rod protein FlgG [Vibrio cholerae MJ-1236] gi|254845029|gb|EET23443.1| flagellar basal-body rod protein FlgG [Vibrio cholerae MO10] gi|255735508|gb|EET90908.1| flagellar basal-body rod protein FlgG [Vibrio cholera CIRS 101] gi|262023844|gb|EEY42543.1| flagellar basal-body rod protein FlgG [Vibrio cholerae RC27] gi|262028661|gb|EEY47315.1| flagellar basal-body rod protein FlgG [Vibrio cholerae INDRE 91/1] gi|262032426|gb|EEY50988.1| flagellar basal-body rod protein FlgG [Vibrio cholerae CT 5369-93] gi|297534667|gb|EFH73503.1| flagellar basal-body rod protein FlgG [Vibrio cholerae RC385] gi|297541120|gb|EFH77174.1| flagellar basal-body rod protein FlgG [Vibrio cholerae MAK 757] gi|327484714|gb|AEA79121.1| Flagellar basal-body rod protein FlgG [Vibrio cholerae LMA3894-4] Length = 262 Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 45/262 (17%), Positives = 96/262 (36%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 MQ + + A + ++T+++N++N T+GF+ + F ++ N + Sbjct: 1 MQPALWVSKTGLDAQQTNIATISNNLANASTIGFKKGRAVFEDLFYQNINQPGAQSSQNT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + G+ +T LD +EGD +F + P I +R+G+F Sbjct: 61 RLPSGLMLGAGSKVVATQKVHTNGNVQTTSNSLDMMIEGDGFFQILMPDGNIAYSRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD--EIFNVGEKGEISQKGKVIATMGLYSVD 164 + D+G++V++ Y + +P V + Q +V+ + Sbjct: 121 TLDDEGAIVTSGAGYRLQPEIIIPEDAISITIGNDGEVSVRVRGQQDNQVLGQITTVDFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + P ++ +++ LE SN N E+ MI + Sbjct: 181 NPGGLEPVGQNLYLPTGASGEPQEGVPGLDGLGDIRQSMLETSNVNVTEELVNMIEAQRV 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I +K M + + Sbjct: 241 YEMNSKVISAVDKMMSFVNQQL 262 >gi|68164544|gb|AAY87273.1| predicted flagellar basal body rod protein [uncultured bacterium BAC17H8] Length = 262 Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 93/259 (35%), Gaps = 20/259 (7%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------- 55 +S ++ A + R+ +A+N++N +T GF+ + F ++ ++ + Sbjct: 4 SSMHVAKTGLNAQQTRMQIIANNLANVNTTGFKRDRANFETLLYQVRRVAGDQVTAEANL 63 Query: 56 ------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKV 108 + + GS I+T LD ALEG +F + P + TR+G F Sbjct: 64 TSSFSVGTGARIVNTQKAHTQGSLITTDNSLDLALEGGGFFQVLLPDGRVGYTRNGAFST 123 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG-KVIATMGLYSVDMSQ 167 +G L ++SG ++A + G + + + + Sbjct: 124 NSEGVLTTSSGYVLQPEIALPDGVSQINISRDGIVSVLVAGGIGAEAVGQLQIADFTNRG 183 Query: 168 GFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222 G S + V +G LE SN N + E+ +MI + + Sbjct: 184 GLQPIGESFYVETDTSGAPIVGNPQDAGLGRVIQGALESSNVNVVTELVEMIETQRAYEV 243 Query: 223 ITTLIDENEKSMLEAIRNI 241 + I ++ + +N+ Sbjct: 244 SSKSITSVDEMLRYISQNL 262 >gi|323490149|ref|ZP_08095369.1| fagellar hook-basal body protein [Planococcus donghaensis MPA1U2] gi|323396197|gb|EGA89023.1| fagellar hook-basal body protein [Planococcus donghaensis MPA1U2] Length = 255 Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 57/252 (22%), Positives = 106/252 (42%), Gaps = 13/252 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M S G++ + +L + +N++N +T+G++ + F +++ ++ V Sbjct: 1 MLRSMYSGVSGMKNFQTKLDVIGNNIANVNTIGYKKSTINFQDLLSQNMSNSGTNPMQVG 60 Query: 61 SGKEY----LSKEVGSFISTGTELDFALEGDAWFALESP-----RGIILTRDGRFKVTDD 111 G ++ GS +STG E D A+ G+ +F ++ P G LTR G F VT Sbjct: 61 LGTTTSAINVNHNPGSVMSTGIETDLAIMGNGFFVVQDPEAPGADGQFLTRSGSFSVTTA 120 Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG---EISQKGKVIATMGLYSVDMSQG 168 G+LVSA G + + N + + IA +G+ + + +G Sbjct: 121 GNLVSAQGYNVLNSAGAPINVAGYDSFSINRSGEVVGRQADGTETTIAFVGISNPENPEG 180 Query: 169 FVRRENSGIS-PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 + S P PT L+ + G LE SN + E +MI + F + + I Sbjct: 181 LKKVGGSMYEVPPNTPTQTAALANTEIGSGMLEMSNVDLTEEFTEMIIAQRGFQANSRTI 240 Query: 228 DENEKSMLEAIR 239 +++ + E + Sbjct: 241 TTSDEILQEVMN 252 >gi|332187904|ref|ZP_08389637.1| flagellar basal-body rod protein FlgG [Sphingomonas sp. S17] gi|332012065|gb|EGI54137.1| flagellar basal-body rod protein FlgG [Sphingomonas sp. S17] Length = 262 Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 43/258 (16%), Positives = 95/258 (36%), Gaps = 20/258 (7%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK-------- 55 + +I A + R+ +++N++N +T GF+ + F + Sbjct: 5 AMHIARTGLDAQDMRMRVISNNLANVNTTGFKRDRAAFETLAYQTITAPGAASSTESKYA 64 Query: 56 -----ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVT 109 + V G+ +T LD AL+G+ +F ++ P G + TR G F + Sbjct: 65 TGLNLGTGVRIQGTARINTQGAMQTTNNSLDMALDGEGFFQVQMPGGTLGYTRAGNFSRS 124 Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDMSQG 168 +G LV++ G + + V + I + + + G Sbjct: 125 AEGLLVTSEGYQVMPGITVPEGATQITIGTDGTVSATIQGQTAPAEIGQIQIATFPNPAG 184 Query: 169 FVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223 + ++ ++ + +++G LE SN N + E+ MI + + Sbjct: 185 LQSKGDNYLTETAASGAVNMGVAGLEGRGQIRQGMLEGSNVNVVEELVDMIETQRAYEVN 244 Query: 224 TTLIDENEKSMLEAIRNI 241 + +I ++ + A +N+ Sbjct: 245 SKMIKSTDEMLQYANQNL 262 >gi|326386932|ref|ZP_08208546.1| flagellar basal body rod protein FlgG [Novosphingobium nitrogenifigens DSM 19370] gi|326208612|gb|EGD59415.1| flagellar basal body rod protein FlgG [Novosphingobium nitrogenifigens DSM 19370] Length = 262 Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 48/259 (18%), Positives = 95/259 (36%), Gaps = 20/259 (7%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------- 55 ++ + A + R+ +A+N++N T GF+ + F+ + + Sbjct: 4 SALYVARTGLEAQDTRMRVIANNLANVSTTGFKRDRANFASLAYQDARVAGAQSSNETTY 63 Query: 56 ------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKV 108 + V GS STG LD AL+GD +F + P G + TR G F Sbjct: 64 ATGLNLGTGVGIQSTTPDMTEGSLQSTGNALDLALDGDGYFQISMPGGQLSYTRAGNFTR 123 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 + +G LV++ G + + V S + I + + S Sbjct: 124 SPEGLLVTSQGYALQPQITIPEGATGITVAQDGTVSATLPGSSQATSIGQITIASFTNPA 183 Query: 168 GFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222 ++ + P++ V++GFLE SN + + E+ MI + + Sbjct: 184 ALKAIGDNFYTETTGSGPVQLGIAGQNGRGNVRQGFLEASNVSVVSELVDMIECQRAYEI 243 Query: 223 ITTLIDENEKSMLEAIRNI 241 + ++ + + A + + Sbjct: 244 NSKMVSAVDDMLKNANQTL 262 >gi|159045792|ref|YP_001534586.1| flagellar basal body rod protein FlgG [Dinoroseobacter shibae DFL 12] gi|157913552|gb|ABV94985.1| flagellar basal-body rod protein FlgG [Dinoroseobacter shibae DFL 12] Length = 261 Score = 160 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 41/255 (16%), Positives = 98/255 (38%), Gaps = 21/255 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + I A + R+ +++N++N +T G+ + +F+++ Sbjct: 1 MRALTIAATGMSAQQMRVEVISNNLANMNTTGYNARRAEFADLHYQQVKAPGTINASDGT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q V + + GS TG +LD A+EG + + P TRDG Sbjct: 61 ALPTGVQLGLGVRAAAVTVELSQGSLSQTGGDLDLAIEGKGYLEVTLPSGASAYTRDGSL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 K + +G +V++ G V ++ + + V + + +++ L Sbjct: 121 KRSAEGLIVTSDGYPVVPEIVIPEGTMRISVDAEGEVYAYFRDTVEPELLGQFSLAGFTN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 ++G ++ + P T ++G+LE S+ +++ E+ ++I + + Sbjct: 181 AKGLEAIGSNLFMESNASGPPLIGVPGEDGLGTFRQGYLEASSVDAVREVTELIEAQRGY 240 Query: 221 NSITTLIDENEKSML 235 + ++ ++ M Sbjct: 241 ELNSKVMTAADQMMG 255 >gi|148976396|ref|ZP_01813102.1| flagellar basal body rod protein FlgG [Vibrionales bacterium SWAT-3] gi|145964219|gb|EDK29475.1| flagellar basal body rod protein FlgG [Vibrionales bacterium SWAT-3] Length = 262 Score = 160 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 46/262 (17%), Positives = 95/262 (36%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + + A + +ST+++N++N T+GF+ + F ++ N + Sbjct: 1 MHPALWVSKTGLDAQQTNISTISNNLANASTIGFKKSRAVFEDLFYQNINQPGGQSSQNT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 + G+ +T LD +EGD +F +E P G +R+G+F Sbjct: 61 ELPSGLMLGAGSKVVATQKVHTHGNAQTTSNSLDMMIEGDGFFQVEMPDGETGYSRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG--EISQKGKVIATMGLYSVD 164 + DG++V++ YP+ +P + Q V+ + + Sbjct: 121 TLNGDGAIVTSGQGYPLQPEIVIPEDAISVTVGNDGEVSVRLRGEQNNVVVGQITITDFV 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + P ++ +++ LE SN N E+ MI + Sbjct: 181 NPGGLEPVGQNLYLPTGASGDPQEGVPGFDGLGNIRQSMLETSNVNVTEELVNMIEAQRV 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I +K M + + Sbjct: 241 YEMNSKVISSVDKMMSFVNQQL 262 >gi|90577346|ref|ZP_01233157.1| putative flagellar basal-body rod protein [Vibrio angustum S14] gi|90440432|gb|EAS65612.1| putative flagellar basal-body rod protein [Vibrio angustum S14] Length = 261 Score = 160 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 44/261 (16%), Positives = 97/261 (37%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M ++ + A + +++ +++N++N +TVGF+ +V F ++ +I+ Sbjct: 1 MHSALWVSKTGMAAQDTKMTAISNNLANVNTVGFKRDRVVFEDLFYSIQRQPGAQVDQLN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q S V G+ +T +LD A+ G +F +E+ G + +R+G+F Sbjct: 61 QLPSGVQLGSGVRVVGTQKVFTQGNSQNTQQQLDLAVMGSGFFQIENSDGEVMFSRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165 V +G +V+ G + + + + + + + L Sbjct: 121 HVNSEGLMVNGQGLPLQPQIQIPEEANTISIGVDGIVTATLAGDPQPQELGQITLAKFIN 180 Query: 166 SQGFVRRENSGI-SPNIPPTPLED----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + P E ++K+G LE SN + EM MI + + Sbjct: 181 PAGLEAIGGNLYKETQASGQPQEMIAGADGAGSLKQGALEGSNVQVVEEMVDMITTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 ++ + + + + Sbjct: 241 EMNAKVVSAADDMLKFVAQAV 261 >gi|91976162|ref|YP_568821.1| flagellar basal body rod protein FlgF [Rhodopseudomonas palustris BisB5] gi|91682618|gb|ABE38920.1| flagellar basal body rod protein [Rhodopseudomonas palustris BisB5] Length = 253 Score = 160 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 61/251 (24%), Positives = 116/251 (46%), Gaps = 11/251 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND-----IDQK 55 MQ + +GL+ Q+ LE+++ VA+N++N +T GF+ + F E + ++ D++ Sbjct: 1 MQNTLLVGLSRQVVLERQMDVVANNLANINTNGFKAERSVFQEFLNTGAHEDNFQAQDRR 60 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115 +SFV Y G T LD A++G A+ +++P+G TRDG+ + G LV Sbjct: 61 VSFVQDRAAYHDFASGPMEETKNPLDVAIDGSAFLVVQTPQGERYTRDGKLSINPQGQLV 120 Query: 116 SASGKYPVLDM----ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171 +ASG + + + NV ++ + + + S Q + Sbjct: 121 NASGYPVLGNSGPIVFQPTDKSINISSDGNVSVLEGVATIDSLRGKLRMVSFARPQSLEK 180 Query: 172 RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 + + + V++G++E SN NS+ EM +MI +T+ + S++ L+ + Sbjct: 181 QGGNLFAATSDRGA--PDPKAIVRQGYVEKSNVNSVLEMTRMIEVTRSYQSVSALLQQES 238 Query: 232 KSMLEAIRNIA 242 AI +A Sbjct: 239 DLQKAAIERLA 249 >gi|153011530|ref|YP_001372744.1| flagellar basal body rod protein FlgF [Ochrobactrum anthropi ATCC 49188] gi|151563418|gb|ABS16915.1| flagellar basal body rod protein [Ochrobactrum anthropi ATCC 49188] Length = 243 Score = 160 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 83/242 (34%), Positives = 131/242 (54%), Gaps = 4/242 (1%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 S +GL++ + LE+R+ +A N++N TVGFR KF +V N +SF + Sbjct: 3 NNSIYVGLSSLITLERRMDAIAHNVANVSTVGFRGEGTKFDTIVS---NKASDDVSFATA 59 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 GK ++ E G I T LD A++GD W ++ +P+G I TRDGR + G LVS +G + Sbjct: 60 GKSFIRTEAGPMIKTDNPLDVAVKGDVWMSVSTPQGQIYTRDGRMNMLPTGDLVSITG-H 118 Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 PVLD+ PI + + G I Q G I +GLY++ SG+ PN Sbjct: 119 PVLDVGGAPIVLNPGGGAPKISSDGAIYQNGAQIGAIGLYTIPADADLTYAGTSGVIPNK 178 Query: 182 PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 P P+ D + V V +G +E SN ++M EM ++I +++ F + L+ + E ++ EAI+ + Sbjct: 179 PAQPVADDNSVGVVQGMIEGSNVDAMTEMTRLISVSRAFEQVNNLLSQQESTVSEAIKTL 238 Query: 242 AS 243 S Sbjct: 239 GS 240 >gi|154253003|ref|YP_001413827.1| flagellar basal body rod protein FlgG [Parvibaculum lavamentivorans DS-1] gi|154156953|gb|ABS64170.1| flagellar basal-body rod protein FlgG [Parvibaculum lavamentivorans DS-1] Length = 261 Score = 160 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 93/259 (35%), Gaps = 21/259 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 S +I +A + + +++N++N T GF+ + +F +++ + Sbjct: 1 MQSLSIAATGMMAQQLNVEVISNNIANMSTTGFKRGRAEFQDLLYQNLRRVGANSSDAGT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q V + G+ +T +LD A++G +F +E P TR G F Sbjct: 61 IVPSGVQVGLGVKTAAVNRIMTQGNMNNTENKLDVAIQGRGYFRIELPSGDDAYTRAGTF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 + DG L++A G + P V +++ M L + Sbjct: 121 DIGPDGQLITADGYTLAPGITIPPEATDIAISADGQVQVAIPGQTAPQIVGQMELVAFAN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + +V +GFLE SN N++ E+ +I + + Sbjct: 181 EGGLDPLGGNLFAETPASGAPTIGTPGNDGLGSVLQGFLETSNVNAVSEITSLITAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 +I +++ M Sbjct: 241 EMNAKIITASDEMMSVTSN 259 >gi|239834448|ref|ZP_04682776.1| flagellar basal body rod protein FlgF [Ochrobactrum intermedium LMG 3301] gi|239822511|gb|EEQ94080.1| flagellar basal body rod protein FlgF [Ochrobactrum intermedium LMG 3301] Length = 243 Score = 160 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 82/242 (33%), Positives = 133/242 (54%), Gaps = 4/242 (1%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 S +GL++ + LE+R+ +A N++N TVGFR KFS +V +D +SF + Sbjct: 3 NNSIYVGLSSLITLERRMDAIAHNVANVSTVGFRGEGTKFSSIVSDKASD---DVSFATA 59 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 GK ++ E G I T LD A++GD W ++ +P+G I TRDGR + G LV+ +G + Sbjct: 60 GKSFIRTEAGPMIKTDNPLDVAVKGDVWMSVSTPQGQIYTRDGRMNMLPTGDLVTVTG-H 118 Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 PVLD+ PI + + G I Q G I +GL+++ SG+ PN Sbjct: 119 PVLDVGGAPIVLNPAGGAPKISSDGAIYQNGAQIGAIGLFTIPADAELTYAGTSGVIPNK 178 Query: 182 PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 P P+ D + V V +G +E SN ++M EM ++I +++ F + L+ + E ++ EAI+ + Sbjct: 179 PAQPVADDNSVGVVQGMIEGSNVDAMTEMTRLISVSRAFEQVNNLLAQQETTVSEAIKIL 238 Query: 242 AS 243 S Sbjct: 239 GS 240 >gi|294679031|ref|YP_003579646.1| flagellar basal-body rod protein FlgG [Rhodobacter capsulatus SB 1003] gi|294477851|gb|ADE87239.1| flagellar basal-body rod protein FlgG [Rhodobacter capsulatus SB 1003] Length = 261 Score = 160 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 42/259 (16%), Positives = 96/259 (37%), Gaps = 21/259 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + I A + R+ +++N++N T G+ + +F++++ Sbjct: 1 MRALQIAATGMSAQQMRVEVISNNLANMSTTGYNARRAEFADLMYQQATRPGTITANDGT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q V S ++ G STG +LD A++G + + P TRDG Sbjct: 61 IVPAGVQIGLGVRSTAVSITLAQGPLASTGGDLDLAIDGYGFLEVTLPSGASAYTRDGGL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 K + DG +V++ G V + V + +++ + L Sbjct: 121 KRSADGQIVTSDGYPVVPGITLPDDATTISINAAGEVYAYFTNQVQPQLLGQITLAGFTN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 +G ++ + T +K+G+LE+S+ +++ E+ ++I + + Sbjct: 181 EKGLEAIGSNLFLETEASGAPTVAAPGTDGLGVIKQGYLEESSVDAVREITELIKAQRGY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 +I ++ + + Sbjct: 241 EMNAKVITAADEMLQATTQ 259 >gi|332298514|ref|YP_004440436.1| flagellar basal-body rod protein FlgG [Treponema brennaborense DSM 12168] gi|332181617|gb|AEE17305.1| flagellar basal-body rod protein FlgG [Treponema brennaborense DSM 12168] Length = 264 Score = 160 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 49/261 (18%), Positives = 92/261 (35%), Gaps = 22/261 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S + + +++N+SN +T G++ +V+F +++ Sbjct: 1 MVRSLWTAATGMNGQQANIDAISNNLSNVNTTGYKQQRVEFEDLIYQNLKLAGTPATEDT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRF 106 Q + V G GS +TG + D A+ G+ +F + TRDG F Sbjct: 61 VTPVGIQMGTGVKVGATQRIITQGSLQNTGVDTDMAVVGEGFFRVQQYDGSFAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLD---MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 KV +G LV++ G + + + + V K + + + LY Sbjct: 121 KVDMNGQLVTSEGLRVMPEIILPEGYNLSTLTVSDDGRVTVKIAGNDDPLTVGQLELYRF 180 Query: 164 DMSQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 + G ++ K FLE SN + + EM QMI + Sbjct: 181 PNAVGLEATGSNLFKVTNASGAAIAGRPGFDGMGVTKHKFLEMSNVSVVNEMVQMIVAQR 240 Query: 219 KFNSITTLIDENEKSMLEAIR 239 + + I ++ + A+ Sbjct: 241 AYEFSSKAIQTSDTMLSSAVN 261 >gi|16126303|ref|NP_420867.1| flagellar basal body rod protein FlgG [Caulobacter crescentus CB15] gi|221235080|ref|YP_002517516.1| flagellar basal body rod protein FlgG [Caulobacter crescentus NA1000] gi|13637955|sp|Q06172|FLGG_CAUCR RecName: Full=Flagellar basal-body rod protein flgG; AltName: Full=Distal rod protein gi|13423543|gb|AAK24035.1| flagellar basal-body rod protein FlgG [Caulobacter crescentus CB15] gi|220964252|gb|ACL95608.1| flagellar basal-body rod protein flgG [Caulobacter crescentus NA1000] Length = 262 Score = 160 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 40/263 (15%), Positives = 92/263 (34%), Gaps = 22/263 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + + A + + +++N++N +TVGF+ + +F +++ Sbjct: 1 MQALRTAASGMAAQQLNVEVISNNIANMNTVGFKRQRAEFQDLLYQTIERAGSQSSSDGN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q V +G Y E G+ T + LD A++G + + P TR G F Sbjct: 61 IVPTGVQVGGGVKAGSVYRITEQGTPTLTDSPLDLAIQGKGYMPILLPSGETAYTRAGNF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFN-VGEKGEISQKGKVIATMGLYSVDM 165 D G +V+ G + V K + + + + + L + Sbjct: 121 STNDQGQIVTEDGYLVQPGITIPQNATDITISKSGLVQVKLDGQPQPQTVGQIQLANFLN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ + + + + E SN +++ E+ +I + + Sbjct: 181 EGGLEAIGDNLFLETAASGAATLAAPGEPGFGMLLQHYTEASNVDAVSEITALITAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNIAS 243 + +I ++ + +A + S Sbjct: 241 EMNSKVISTADQML-QATSQLRS 262 >gi|221640826|ref|YP_002527088.1| flagellar basal body rod protein FlgF [Rhodobacter sphaeroides KD131] gi|221161607|gb|ACM02587.1| Hypothetical Protein RSKD131_2727 [Rhodobacter sphaeroides KD131] Length = 239 Score = 160 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 61/242 (25%), Positives = 109/242 (45%), Gaps = 6/242 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + L Q L + + +VA+N++N T GFR + F+E V ++ + ++ + Sbjct: 1 MDAAGYTTLTRQSGLMREMQSVANNIANLSTTGFRREGIVFTEHVKRLEGEASLSMASAS 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + + + G TG DFA+ G+ +F +E+P+G LTR G F +G LV + G Sbjct: 61 ARQ--IDLTQGGLTRTGAPFDFAIMGEGFFLIETPQGQELTRAGSFTPNAEGELVDSDGN 118 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 LD + P+ IP + G +S + I +GL+ G + S Sbjct: 119 RL-LDAGAAPLFIPPDARGVVLSADGTLSAGDQPIGRVGLWQPTDPLGLRHEGGTRFSAE 177 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 P E T+ +G LEDSN + E+ +MI + + + + +D + + +R Sbjct: 178 GGTEPAEG---ATLVQGALEDSNVEPVSEIARMIDVQRAYEMGQSFLDREDDRIRTTVRT 234 Query: 241 IA 242 + Sbjct: 235 LG 236 >gi|239815249|ref|YP_002944159.1| flagellar basal-body rod protein FlgG [Variovorax paradoxus S110] gi|239801826|gb|ACS18893.1| flagellar basal-body rod protein FlgG [Variovorax paradoxus S110] Length = 262 Score = 160 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 47/262 (17%), Positives = 95/262 (36%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS--- 57 M + I A + + T+A+N++N +T GF+ KV FS+++ + Q Sbjct: 1 MFDALYISATGMQAQQLNVDTIANNLANVNTTGFKKSKVGFSDLMVREAGRLAQTPQEAG 60 Query: 58 ----------FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 V ++G T + D A++G+ + + P TR G F Sbjct: 61 ILGAESRLGAGVGIASVSKLFDMGDLKKTESAFDIAIQGEGFLEVTMPDGSSSFTRGGTF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 KV DG L ++ G ++A Q Q D V + + + L Sbjct: 121 KVNRDGLLATSGGFPLKSNVAIPDNAQNMQIDGDGRVRVQVGGQSTPIEVGQLDLVRFTS 180 Query: 166 SQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 + + ++ + + + +GFLE SN EM ++ + + Sbjct: 181 PSALLPQGDNLYRSSTGSGEAIAAKASEDGMGSFAQGFLEGSNVKLTEEMVNLMVAQRVY 240 Query: 221 NSITTLIDENEKSMLEAIRNIA 242 + ++ +++ + I + Sbjct: 241 EANVKVMQASDEMLG-MINGLR 261 >gi|206603525|gb|EDZ40005.1| Flagellar basal body rod protein [Leptospirillum sp. Group II '5-way CG'] Length = 261 Score = 160 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 49/260 (18%), Positives = 84/260 (32%), Gaps = 21/260 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S + A + L + +N++N +T GF+ + F +++ Sbjct: 1 MFRSLWNAASGMEAQQTSLDVITNNLANVNTTGFKRQRANFQDLMYQTLVPPGEAQSLLG 60 Query: 54 -------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGR 105 Q V SG GSF T LD A++G+ +F + P TRDG Sbjct: 61 NQSPTGMQVGLGVRSGSVQKIFLQGSFRQTNNPLDLAIQGNGFFQISLPDGRTAYTRDGT 120 Query: 106 FKVTDDGSLVSASGKYPVLD-MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 F + G LV+ G + V + + + L Sbjct: 121 FSIDGQGRLVTQDGLPTNPPITVPPNAKSVNVSPAGEVSVMLPGQVQPVRVGQLVLSQFV 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQK 219 G R ++ + + T ++ GFLE SN N E+ M+ + Sbjct: 181 NPAGLESRGDNLFMETAASGQPQLSNPGTNGAGRLQSGFLEASNVNVAEELVNMVIGQRA 240 Query: 220 FNSITTLIDENEKSMLEAIR 239 + T I + + Sbjct: 241 YQMDATGIRTVNRMLGYTAT 260 >gi|32490792|ref|NP_871046.1| flagellar basal body rod protein FlgG [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25165998|dbj|BAC24189.1| flgG [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 260 Score = 160 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 45/259 (17%), Positives = 91/259 (35%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + + +++N+SN T GF+ K F +++ Sbjct: 1 MIRSLAIAKTGLEAQQINMDVISNNISNVSTNGFKRQKAIFEDLLYQTIRQPGAKSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V S G +TG E D A++G +F + G + TR+G F Sbjct: 61 ILPSGLQLGTGVNSSATIKIHLQGGLTNTGNETDIAIQGPGFFQVLMSDGTNMYTRNGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQKGKVIATMGLYSVDM 165 ++ G LV+++G + + + + + + + + Sbjct: 121 QLDQYGQLVTSNGYPVQPSITIPNGSSNLTISKDGIVSVMVPGQTQPQEVGQLTISTFIN 180 Query: 166 SQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 S G S ++K+ F+E+SN N E+ MI + + Sbjct: 181 SSGLESAGESLYKETQSSGSPADNTPGMNGAGSLKQKFVENSNVNIAEELITMIQTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + +I +++ + + Sbjct: 241 ELNSKVISTSDQMLQRLSQ 259 >gi|254698165|ref|ZP_05159993.1| flagellar basal body rod protein FlgG [Brucella abortus bv. 2 str. 86/8/59] Length = 246 Score = 160 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 46/246 (18%), Positives = 86/246 (34%), Gaps = 21/246 (8%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--------------ISFVASGK 63 L +A+N++N +T GF+ + +F++++ + V + Sbjct: 1 NLEVIANNIANINTTGFKRARAEFTDLLYQSERTAGVPNQANQAIVPEGALVGLGVQTAA 60 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122 GSF TG D AL G WF ++SP + TR G F DG LV+ G Sbjct: 61 VRNLHIQGSFNQTGNPYDVALTGRGWFQIQSPTGETLYTRAGAFNKNADGQLVTLDGNPV 120 Query: 123 VLDMASVPIQIPQKDEIFNVGE-KGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 + P I K + + + L + G + Sbjct: 121 EPAITIPPDAIEVTITDTGQVFAKLQDQINQVDLGQLTLANFTNEAGLEPLGGNLYRETE 180 Query: 182 PPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 ++K+G+LE SN + + E+ +I + + + +I ++ Sbjct: 181 ASGGPLVGVPGDPGYGSIKQGYLEASNVDPVKEITDLITAQRAYEMNSKVIQAADEMAAT 240 Query: 237 AIRNIA 242 +N+ Sbjct: 241 VSKNLR 246 >gi|168186142|ref|ZP_02620777.1| flagellar basal-body rod protein FlgG [Clostridium botulinum C str. Eklund] gi|169295678|gb|EDS77811.1| flagellar basal-body rod protein FlgG [Clostridium botulinum C str. Eklund] Length = 259 Score = 160 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 50/261 (19%), Positives = 103/261 (39%), Gaps = 23/261 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVG----------A 47 M S ++ + E + +++N++N TVG++ + F +V+ Sbjct: 1 MIRSIYTAVSGLINQEAQQDVISNNLANATTVGYKKDDLVGKSFKDVMMHNYDKVVRGKH 60 Query: 48 IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107 +KNDI + Y + G+ ST + DFAL+G +F + TRDG F Sbjct: 61 VKNDIGMLSMGCKLDQTYTNFTQGALQSTDKKTDFALQGKGFFTVSRGGRNFYTRDGHFH 120 Query: 108 VTDDGSLVSASGKYPVLDM------ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLY 161 V G LV+++G + + + K + + GE+ + + + Sbjct: 121 VDRGGYLVNSTGDKVIGKNLRTGATEPINVMQGGKPSKISCNDSGEMFVGNDLAYKVQVV 180 Query: 162 SVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221 + + + ++ + VK+G+LE SN N M + M+ + F Sbjct: 181 DFNNYEALSKEGDNLY----TGGNPNVIENTMVKQGYLEKSNINVMEAVSDMMMSMRNFE 236 Query: 222 SITTLIDENEKSMLEAIRNIA 242 S L+ ++++ + + + Sbjct: 237 SNQKLVQSLDETLGKTVNEVG 257 >gi|242278483|ref|YP_002990612.1| flagellar basal-body rod protein FlgF [Desulfovibrio salexigens DSM 2638] gi|242121377|gb|ACS79073.1| flagellar basal-body rod protein FlgF [Desulfovibrio salexigens DSM 2638] Length = 255 Score = 160 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 54/258 (20%), Positives = 99/258 (38%), Gaps = 23/258 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFV- 59 M++S L ++ E R+ A+N++N +T GF+ F + +D Sbjct: 1 MRSSIFSALFGAMSNEHRIDISANNLANVNTTGFKRDNCAFQDTFIRFAHDYVADAKPYL 60 Query: 60 ---------------ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDG 104 +E + GSF TG LD A+ GD +F ++ LTR+G Sbjct: 61 RDKDQLPEAKIMARPRLSEEVIDMSQGSFQKTGNPLDLAIRGDGFFKVQKNGETFLTRNG 120 Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 F ++ +G+LV+ G + + V + V +G I G+ + + Sbjct: 121 VFTLSSEGTLVTEQGYPVMANGGEVNL---PPRSRVAVDGEGVIFADGQEVGRLDFVQPA 177 Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224 + + + S P E V +G++E SN + EM MI + F Sbjct: 178 DYRALKKEGENLFSNEGGEVPAE----GEVAQGYIEKSNVEVVNEMVAMIECQRSFEMYQ 233 Query: 225 TLIDENEKSMLEAIRNIA 242 +I ++ + I+ + Sbjct: 234 KMITTTDQLDQKVIQQVG 251 >gi|209964689|ref|YP_002297604.1| flagellar basal-body rod protein FlgF [Rhodospirillum centenum SW] gi|209958155|gb|ACI98791.1| flagellar basal-body rod protein FlgF [Rhodospirillum centenum SW] Length = 240 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 68/242 (28%), Positives = 110/242 (45%), Gaps = 5/242 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M+ I L+ Q A+ +++ VA+N++N +T GF++ + F E + + +++SFV Sbjct: 1 MENVLYIALSRQEAMRRQMDVVANNIANMNTSGFKSQRPLFLEYL-ERPDRRQERMSFVQ 59 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + + G T LD AL GD +FA+E+ G TR G F++ D LV +G Sbjct: 60 DYGLMRNLQAGPVTVTDNPLDVALRGDGYFAVETLAGPRYTRAGGFQLNTDRELVDRNG- 118 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 PVL A I IP + G I + +A + + S D Q S Sbjct: 119 LPVLSDAGARIVIPDGANQIRIKGDGSIETEQGPLARLKVVSFDDEQKMQELGGGLYSTE 178 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 P+E V +G LE SN + E QMI + + + + +ID + + AIR Sbjct: 179 QEERPVEKPE---VTQGALEGSNVQPIVETTQMIDVLRAYQNTQRMIDSEHERLRTAIRQ 235 Query: 241 IA 242 + Sbjct: 236 LG 237 >gi|167905092|ref|ZP_02492297.1| flagellar basal body rod protein FlgG [Burkholderia pseudomallei NCTC 13177] Length = 258 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 49/255 (19%), Positives = 92/255 (36%), Gaps = 20/255 (7%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID----------- 53 I A + +L VA+N++N +TVGF+ +V F ++ ++ Sbjct: 1 MWISKTGLQAQDAKLQAVANNLANVNTVGFKRDRVVFEDLFYRVERQPGAQLDQDNASPS 60 Query: 54 --QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTD 110 Q S GS +TG LD A+ G + + G TR G+ + Sbjct: 61 GIQMGSGTRIVGTQKIFTDGSVQTTGQSLDVAVMGKGFIQVLMANGETGYTRAGQLSINA 120 Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169 +G LV+A G +++ E V + + + L + G Sbjct: 121 EGLLVNAQGLPLQPEISIPENATDIAIGENGIVAATMPGASSPSEVGQIQLANFVNPAGL 180 Query: 170 VRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224 + ++ + P + T +K+G LE SN + EM MI + + T Sbjct: 181 LALGDNLYMETVASGPPNEGEPGTDVFGKIKQGALEGSNVQVVEEMVDMIAAQRTYEMNT 240 Query: 225 TLIDENEKSMLEAIR 239 ++ + + + + Sbjct: 241 KVLSAADNMLQQLSQ 255 >gi|254508453|ref|ZP_05120573.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus 16] gi|219548663|gb|EED25668.1| flagellar basal-body rod protein FlgG [Vibrio parahaemolyticus 16] Length = 262 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 47/262 (17%), Positives = 94/262 (35%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + + A + +ST+++N++N TVG++ + F ++ N + Sbjct: 1 MHPALWVSKTGLDAQQTNISTISNNLANASTVGYKKSRAVFEDLFYQNINQPGGQSSQNT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + G+ +T LD +EGD +F + P I TR+G+F Sbjct: 61 ELPSGLMLGAGSKVVATQKVHTQGNTQTTNNSLDMMIEGDGFFQILMPDGNIGYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD--EIFNVGEKGEISQKGKVIATMGLYSVD 164 V D+G++V++ Y + +P V + Q V+ + Sbjct: 121 TVNDEGAIVTSGSGYNLQPEIVIPEDAISITVGTDGEVSVRVRGEQNNVVVGQITTVDFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + P ++ +++ LE SN N E+ MI + Sbjct: 181 NPGGLEPVGQNLYLPTGASGDPQEGVPGFDGFGDIRQSMLETSNVNVTEELVNMIEAQRV 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I +K M + + Sbjct: 241 YEMNSKVISAVDKMMSFVNQQL 262 >gi|332559803|ref|ZP_08414125.1| FlgF2 [Rhodobacter sphaeroides WS8N] gi|332277515|gb|EGJ22830.1| FlgF2 [Rhodobacter sphaeroides WS8N] Length = 239 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 62/242 (25%), Positives = 109/242 (45%), Gaps = 6/242 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + L Q L + + +VA+N++N T GFR + F+E V ++ + ++ + Sbjct: 1 MDAAGYTTLTRQSGLMREMQSVANNIANLSTTGFRREGIVFTEHVKRLEGEASLSMASAS 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + + + G TG DFA+ G+ +F +E+P+G LTR G F +G LV A G Sbjct: 61 ARQ--IDLTQGGLTRTGAPFDFAIMGEGFFLIETPQGQELTRAGSFTPNAEGELVDADGN 118 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 LD + P+ IP + G +S + I +GL+ G + S Sbjct: 119 RL-LDAGAAPLFIPPDARGVVLSADGTLSAGDQPIGRVGLWQPTDPLGLRHEGGTRFSAE 177 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 P E T+ +G LEDSN + E+ +MI + + + + +D + + +R Sbjct: 178 GGTEPAEG---ATLVQGALEDSNVEPVSEIARMIDVQRAYEMGQSFLDREDDRIRTTVRT 234 Query: 241 IA 242 + Sbjct: 235 LG 236 >gi|54308099|ref|YP_129119.1| flagellar basal body rod protein FlgG [Photobacterium profundum SS9] gi|46912525|emb|CAG19317.1| putative polar flagellar FlgG [Photobacterium profundum SS9] Length = 262 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 43/262 (16%), Positives = 94/262 (35%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + + A + +ST+++N++N T+GF+ + F ++ N + Sbjct: 1 MHPALWVSKTGLDAQQTNISTISNNLANASTIGFKKSRAVFEDLFYQNINQPGGQSSQDT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + G+ +T +D +EG+ +F + P I TR+G+F Sbjct: 61 ELPSGLMLGAGSKVVATQKVFTQGNTQTTNNSMDMMIEGEGFFQILLPDGNIGYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD--EIFNVGEKGEISQKGKVIATMGLYSVD 164 + DG +V+ Y V ++P V + Q+ +V+ + Sbjct: 121 TINGDGQMVTTGSGYVVQPEIAIPEDAVGITVGNDGEVSARIRGQQENQVLGQLTTVGFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + P ++ +++ LE SN N E+ MI + Sbjct: 181 NPGGLEPIGQNLFLPTGASGDAQEGVPGLDGLGAIRQSMLETSNVNVTEELVNMIEAQRV 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I ++ + + + Sbjct: 241 YEMNSKVISTVDQMLSYVNQQL 262 >gi|296447438|ref|ZP_06889363.1| flagellar basal-body rod protein FlgG [Methylosinus trichosporium OB3b] gi|296255058|gb|EFH02160.1| flagellar basal-body rod protein FlgG [Methylosinus trichosporium OB3b] Length = 262 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 43/256 (16%), Positives = 87/256 (33%), Gaps = 21/256 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----------- 50 + I A +Q + +++N++N +T F+ + +F++++ Sbjct: 1 MRALAIAATGMNAQQQNIEVISNNIANINTTAFKRSRAEFTDLLYQADRLQGVSNRGRDA 60 Query: 51 ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + Q V + GS TG +LD AL G WF + P I+ TR G F Sbjct: 61 TVPEGAQTGLGVRLTAIRSLQTQGSLAQTGNQLDLALNGRGWFQVTGPDSEILYTRSGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIP-QKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 +G LV+ G + + + V + + + + + Sbjct: 121 STNANGQLVTGDGYLVSPTIIIPNNAVSVSVSQSGLVTAVIGGQTNPQQLGQLTIANFAN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + N + + +LE SN +S+ E+ +I + F Sbjct: 181 ESGLEALGGNLFRQNQASGTPVVGVPGDPGYGVISQYYLESSNVDSVKELVNLIAAQRAF 240 Query: 221 NSITTLIDENEKSMLE 236 + +I ++ Sbjct: 241 ELNSKVISAVDEMAGT 256 >gi|124516715|gb|EAY58223.1| Flagellar basal body rod protein FlgG [Leptospirillum rubarum] Length = 261 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 50/260 (19%), Positives = 84/260 (32%), Gaps = 21/260 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S + A + L + +N++N +T GF+ + F +++ Sbjct: 1 MFRSLWNAASGMEAQQTSLDVITNNLANVNTTGFKRQRANFQDLMYQTLVPPGEAQSLLG 60 Query: 54 -------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGR 105 Q V SG GSF T LD A++G+ +F + P TRDG Sbjct: 61 NQSPTGMQVGLGVRSGSVQKIFLQGSFRQTNNPLDLAIQGNGFFQISLPDGRTAYTRDGT 120 Query: 106 FKVTDDGSLVSASGKYPVLD-MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 F + G LV+ G + V + + + L Sbjct: 121 FSIDGQGRLVTQDGLPTNPPITVPPNAKSVNVSPAGEVSVMLPGQVQPVRVGQLVLSQFV 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQK 219 G R N+ + + T ++ GFLE SN N E+ M+ + Sbjct: 181 NPAGLESRGNNLFMETAASGQPQLSNPGTNGTGRLQSGFLEASNVNVAEELVNMVIGQRA 240 Query: 220 FNSITTLIDENEKSMLEAIR 239 + T I + + Sbjct: 241 YQMDATGIRTVNRMLGYTAT 260 >gi|163850063|ref|YP_001638106.1| flagellar basal body rod protein FlgG [Methylobacterium extorquens PA1] gi|218528666|ref|YP_002419482.1| flagellar basal body rod protein FlgG [Methylobacterium chloromethanicum CM4] gi|240137197|ref|YP_002961666.1| flagellar biosynthesis; cell-distal portion of basal-body rod [Methylobacterium extorquens AM1] gi|254559209|ref|YP_003066304.1| cell-distal portion of basal-body rod biosynthesis protein [Methylobacterium extorquens DM4] gi|163661668|gb|ABY29035.1| flagellar basal-body rod protein FlgG [Methylobacterium extorquens PA1] gi|218520969|gb|ACK81554.1| flagellar basal-body rod protein FlgG [Methylobacterium chloromethanicum CM4] gi|240007163|gb|ACS38389.1| flagellar biosynthesis; cell-distal portion of basal-body rod [Methylobacterium extorquens AM1] gi|254266487|emb|CAX22251.1| flagellar biosynthesis; cell-distal portion of basal-body rod [Methylobacterium extorquens DM4] Length = 262 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 44/256 (17%), Positives = 87/256 (33%), Gaps = 21/256 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55 + I A + L +A+N++N +T GF+ + +F++++ + Sbjct: 1 MRALAIAATGMSAQQLNLEVIANNIANLNTTGFKGARAEFTDLLYQAERQQGVPNQAGQE 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 V + GS +TG +LD A+ G +F + SP I TR G F Sbjct: 61 AVPEGAMLGLGVRAAAIRNLHRQGSLANTGNQLDLAVNGRGYFQITSPAGEIQYTRAGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE-KGEISQKGKVIATMGLYSVDM 165 + G LV+ G + K + + + + L + Sbjct: 121 NKNNAGQLVTMEGYAVDPAILIPQNTTQVTINESGQVFAKIDGQVALQNVGQLTLANFAN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLS-----GVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G N + +++G+LE SN + + E+ +I + F Sbjct: 181 DSGLEPLGNGLYRETPASGAPVVGNPGDVSYGKLQQGYLEGSNVDPVKEITSLITAQRAF 240 Query: 221 NSITTLIDENEKSMLE 236 + +I ++ Sbjct: 241 EMNSKVIQAADEMAGT 256 >gi|288958675|ref|YP_003449016.1| flagellar basal-body rod protein [Azospirillum sp. B510] gi|288910983|dbj|BAI72472.1| flagellar basal-body rod protein [Azospirillum sp. B510] Length = 261 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 96/259 (37%), Gaps = 21/259 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 S IG +A + + T+++N++N+ T G++ + +F +++ I Sbjct: 1 MRSLAIGATGMIAQQLNVETISNNIANSTTTGYKKQRAEFQDLLYQNFRRIGSTSSDAGT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V E G+ T +LD A+ G +F + P TR G F Sbjct: 61 VVPTGVQVGAGVRVAAVARVLEQGNLNITDNKLDVAINGSGYFQITLPSGDTSYTRAGNF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVG-EKGEISQKGKVIATMGLYSVDM 165 K++ G +V+A G ++ + K + + + + L + Sbjct: 121 KLSPQGVIVTADGYTVQPNITIPTNAVDISINSSGEVLVKLDGQTATQNVGQIQLATFAN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKF 220 + G ++ + V +G LE SN N + E+ +I + + Sbjct: 181 AAGLEATGDNLFMETAASGQPVTGNPGAPGFGRVTQGALETSNVNVVQEITTLITAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + +I ++ M +A + Sbjct: 241 EMNSKVIKTTDEMMQQASQ 259 >gi|89069819|ref|ZP_01157154.1| putative flagellar basal body rod protein [Oceanicola granulosus HTCC2516] gi|89044620|gb|EAR50736.1| putative flagellar basal body rod protein [Oceanicola granulosus HTCC2516] Length = 239 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 65/239 (27%), Positives = 111/239 (46%), Gaps = 5/239 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + L Q L + +A+N++N T G+R+ V FSE V A+ D A Sbjct: 1 MGNASYTTLTRQSGLMAEMRLIANNIANAATTGYRSEGVIFSEYVSALGPGHDSLSMARA 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + ++ G +TG D A+EG+ +F +++P G LTR G F +G LV+ G Sbjct: 61 AVRDTDI-SPGGMTATGGAFDLAIEGEGFFLVQTPGGERLTRAGHFMPNANGDLVTPDGY 119 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 PVLD P+ +P V G +S G+ + +G+ G VR + Sbjct: 120 -PVLDAGGAPLFVPPAAASVTVAPDGVLSADGQPLGQVGVVRPRDPAGLVREDGVRFRAE 178 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 P+ V V +GFLE+SN + + ++ +MI + + + +++ ++ + AIR Sbjct: 179 GGFEPV---PRVRVAQGFLEESNVDPILQVARMIEVQRAYELGQRFLEQEDERLRGAIR 234 >gi|212634350|ref|YP_002310875.1| flagellar basal body rod protein FlgG [Shewanella piezotolerans WP3] gi|212555834|gb|ACJ28288.1| Flagellar basal-body rod protein FlgG [Shewanella piezotolerans WP3] Length = 262 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 43/262 (16%), Positives = 90/262 (34%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + I A + +S +++N++N TVGF+ + F +++ N Sbjct: 1 MHPALWISKTGLDAQQTDISVISNNVANASTVGFKKSRAVFEDLLYQNVNQAGGVSASNT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 + G+ ++T LD +EG +F ++ P G TR G+F Sbjct: 61 KLPNGLNIGAGTQVVATQKVFTQGNMLTTDNSLDLMVEGPGFFEVQMPDGTAAYTRTGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQK--GKVIATMGLYSVD 164 + D G +V+ Y V ++P + +V+ + + Sbjct: 121 SLDDTGQIVTPGSGYVVQPAITIPDDATSITVSAEGEVSVKTPGNAENQVVGQLAMSDFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + +++G LE SN N E+ +I + Sbjct: 181 NPAGLDPMGQNLYMETGASGTPIQGTASLDGMGAIRQGALETSNVNVTEELVNLIESQRI 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I ++ + +N+ Sbjct: 241 YEMNSKVISAVDQMLSYVNQNL 262 >gi|83594174|ref|YP_427926.1| hypothetical protein Rru_A2842 [Rhodospirillum rubrum ATCC 11170] gi|83577088|gb|ABC23639.1| conserved hypothetical protein [Rhodospirillum rubrum ATCC 11170] Length = 245 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 59/240 (24%), Positives = 112/240 (46%), Gaps = 6/240 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---DIDQKIS 57 M+ + I L+ Q AL ++L V++N++N +T G++ + FSE + ++ + +K++ Sbjct: 1 MENTSYIALSRQTALWRQLDVVSNNLANMNTNGYQAEQTLFSEYLMNTRDSHFRLPEKLA 60 Query: 58 FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSA 117 + Y G TG LD A+ G+ +F +E G TR GRF + +G +V+A Sbjct: 61 YTQDAGTYRDLTAGPLEHTGNPLDLAINGEGYFEVEDGAGPAYTRGGRFTLDAEGKVVTA 120 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177 G P++ A P+ I + + G +S + + + L S + Q R Sbjct: 121 DG-RPLMTDAGTPLVIAPNEGEVTISATGTVSTENGPVGKLRLVSFEDEQKLRRIGGGLF 179 Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + ++ +++G +E SN N + EM +MI + + + + LI+ L A Sbjct: 180 --DSGDQQANPITEPRIEQGMIEKSNVNPVVEMTRMIQVQRSYEAANKLIESENDRQLNA 237 >gi|304392506|ref|ZP_07374446.1| flagellar basal-body rod protein FlgG [Ahrensia sp. R2A130] gi|303295136|gb|EFL89496.1| flagellar basal-body rod protein FlgG [Ahrensia sp. R2A130] Length = 262 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 45/262 (17%), Positives = 93/262 (35%), Gaps = 21/262 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----------- 50 + +I A ++ L +A N++N +T GF+ +V+F++++ + Sbjct: 1 MRALSIAATGMQAQQKNLDVIAHNIANINTTGFKRGRVEFTDLIYDTERLNGIPNRANSA 60 Query: 51 ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + V + G TG D AL G+ WF +E+ + R G F Sbjct: 61 NVPEGAHFGLGVRTASVRNVHLQGQVAQTGNRFDLALTGNGWFQIENAAGETVYQRSGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE-KGEISQKGKVIATMGLYSVDM 165 G LV+ G + + + + + I + L + Sbjct: 121 NTNGAGELVTQDGLRVQPGITVPDNTTDIFINASGAVFARVGGAAEQQEIGQLSLATFAN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ + + + T+++G+LE SN S+ E+ Q+I + + Sbjct: 181 DVGLTPLGDNLFAQSDASGEPQVGTPGDPGYATIRQGYLESSNVESVKEITQLIAAQRGY 240 Query: 221 NSITTLIDENEKSMLEAIRNIA 242 + +I + RN+ Sbjct: 241 EMNSKVIQAADDMASIVSRNLR 262 >gi|332704824|ref|ZP_08424912.1| flagellar basal-body rod protein FlgF [Desulfovibrio africanus str. Walvis Bay] gi|332554973|gb|EGJ52017.1| flagellar basal-body rod protein FlgF [Desulfovibrio africanus str. Walvis Bay] Length = 277 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 53/277 (19%), Positives = 106/277 (38%), Gaps = 38/277 (13%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-------- 52 MQ + + L+ E R++ +++N++N T G++T V F +V +D Sbjct: 1 MQEAIYSAVFGALSSEHRMNIISNNLANVSTTGYKTDSVTFKDVFVPFAHDYILDSKEHL 60 Query: 53 --------DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDG 104 I+ + GS TG LD A++GD +F + +P G+ TR+G Sbjct: 61 RAKPLWPDADVIAKPRLAEHKTDFAQGSLRKTGDPLDLAIQGDGFFKILTPDGVRYTRNG 120 Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 F +G +V ++G + + + G +S+ G + T+ L D Sbjct: 121 HFNAMPNGQIVDSNGNPLLGTD---GPIFLSGSGVVEIDPAGNVSEGGAQVGTIALVRFD 177 Query: 165 MSQGFVRRENSGI-------------------SPNIPPTPLEDLSGVTVKRGFLEDSNAN 205 +G ++ + + +++GFLE SN Sbjct: 178 NPRGVIKDGQNLYKLSEDFEANEMAVSPGMPEITTGSDGTPQTRISPVIQQGFLESSNVE 237 Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 + EM +MI + + F + ++ + I+++ Sbjct: 238 IVTEMVRMIEVNRVFEAYQKIMRGTQDMDSSLIKSMG 274 >gi|312882657|ref|ZP_07742394.1| flagellar basal body rod protein FlgG [Vibrio caribbenthicus ATCC BAA-2122] gi|309369618|gb|EFP97133.1| flagellar basal body rod protein FlgG [Vibrio caribbenthicus ATCC BAA-2122] Length = 262 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 48/262 (18%), Positives = 95/262 (36%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + + A + +ST+++N++N TVGF+ + F ++ N + Sbjct: 1 MHPALWVSKTGLDAQQTNISTISNNLANASTVGFKKSRAVFEDLFYQNINQPGGQSSQNT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + G+ +T LD +EGD +F + P I +R+G+F Sbjct: 61 ELPSGLMLGAGSKVVATQKVHTQGNTQTTNNSLDMMIEGDGFFQILMPDGNIGYSRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD--EIFNVGEKGEISQKGKVIATMGLYSVD 164 V D+G +V++ Y + ++P V + Q +V+ + Sbjct: 121 TVNDEGIIVTSGAGYTLEPEIAIPEDAISITVGTDGEVSVRVRGQQNNQVVGQITTVDFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + P ++ V++ LE SN N E+ MI + Sbjct: 181 NPGGLEPIGQNLYLPTGASGDPQEGVPGFDGFGDVRQSMLETSNVNVTEELVNMIEAQRV 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I +K M + + Sbjct: 241 YEMNSKVISAVDKMMGFVNQQL 262 >gi|90411007|ref|ZP_01219021.1| putative polar flagellar FlgG [Photobacterium profundum 3TCK] gi|90328220|gb|EAS44531.1| putative polar flagellar FlgG [Photobacterium profundum 3TCK] Length = 262 Score = 159 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 43/262 (16%), Positives = 94/262 (35%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + + A + +ST+++N++N T+GF+ + F ++ N + Sbjct: 1 MHPALWVSKTGLDAQQTNISTISNNLANASTIGFKKSRAVFEDLFYQNINQPGGQSSQDT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + G+ +T +D +EG+ +F + P I TR+G+F Sbjct: 61 ELPSGLMLGAGSKVVATQKVFTQGNTQTTNNAMDMMIEGEGFFQVLLPDGNIGYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD--EIFNVGEKGEISQKGKVIATMGLYSVD 164 + DG +V+ Y V ++P V + Q+ +V+ + Sbjct: 121 TINGDGQMVTTGSGYVVQPEIAIPEDAVGITVGNDGEVSARIRGQQENQVLGQLTTVGFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + P ++ +++ LE SN N E+ MI + Sbjct: 181 NPGGLEPIGQNLFLPTGASGDAQEGVPGLDGLGAIRQSMLETSNVNVTEELVNMIEAQRV 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I ++ + + + Sbjct: 241 YEMNSKVISTVDQMLSYVNQQL 262 >gi|312621331|ref|YP_004022944.1| fagellar hook-basal body protein [Caldicellulosiruptor kronotskyensis 2002] gi|312201798|gb|ADQ45125.1| fagellar hook-basal body protein [Caldicellulosiruptor kronotskyensis 2002] Length = 255 Score = 159 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 51/258 (19%), Positives = 103/258 (39%), Gaps = 21/258 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS-----------EVVGAIK 49 M + + ++ + A+N++N T GF+ + + V + Sbjct: 1 MIRGIYTSASGMILNQKLMDLTANNVANVSTTGFKRDVAQIESFRNMLVYRIYDKVTSPD 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP-----RGIILTRDG 104 N I + G +I T L+ A++GD +F +E P + I TR+G Sbjct: 61 NAIGYMSLGADVSRIVSDFSQGLYIKTDEPLNLAIKGDGFFTIEVPENQGAQQIFYTRNG 120 Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 F + G LV+ +G Y + + Q + E+G + Q G+++ + + Sbjct: 121 AFTLNSRGELVTLNGFYVLG---QNGRIVLQNGGQVRIDEQGNVYQNGRIVDRLRVVDFQ 177 Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224 + N+ + + V +G+LE SN NS+ EM MI++ + + + Sbjct: 178 DKSLLRKVGNNLYEADATVQQIPFS--GKVLQGYLEGSNVNSVQEMVNMINVLRAYEANQ 235 Query: 225 TLIDENEKSMLEAIRNIA 242 ++++ +A+ IA Sbjct: 236 KAFVIQDETLQKAVNEIA 253 >gi|160878401|ref|YP_001557369.1| flagellar basal body rod protein [Clostridium phytofermentans ISDg] gi|160427067|gb|ABX40630.1| flagellar basal body rod protein [Clostridium phytofermentans ISDg] Length = 257 Score = 159 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 53/259 (20%), Positives = 102/259 (39%), Gaps = 21/259 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51 M G ++RL +++N++N+ TVG++ V F +V+ D Sbjct: 1 MVRGLYTGWTGMENEQKRLDIISNNLANSATVGYKKEGVTNQSFDDVLTLKIRDESENFT 60 Query: 52 ---IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-----PRGIILTRD 103 I + V G+ Y GS TG DFA+EG +F +E TR Sbjct: 61 DKRIGKMTLGVKLGEVYTDYTQGSLRETGNTFDFAIEGSGFFKMEVLDKDGNSKERYTRA 120 Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 G+F + +G +V +G + L +Q+P + +G + G + + + Sbjct: 121 GQFLMDKEGYVVDVNGNH--LMSEGGYLQVPTDASQIVIDLQGNVFADGAQVDKLVVTDF 178 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223 + + S + +++G+ E SN N + EM MI +T+ + + Sbjct: 179 ENYDYLKKFGESMYE--AVDGARVKDTAAGIRQGYTEQSNVNVVSEMVNMIAITRAYEAN 236 Query: 224 TTLIDENEKSMLEAIRNIA 242 ++ + ++ A +I Sbjct: 237 QKVLQSIDGTLELAANSIG 255 >gi|150388210|ref|YP_001318259.1| hypothetical protein Amet_0370 [Alkaliphilus metalliredigens QYMF] gi|149948072|gb|ABR46600.1| protein of unknown function DUF1078 domain protein [Alkaliphilus metalliredigens QYMF] Length = 264 Score = 159 bits (401), Expect = 4e-37, Method: Composition-based stats. Identities = 50/264 (18%), Positives = 96/264 (36%), Gaps = 24/264 (9%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + + A + + TVA+NM+N +T ++ + +F +++ A + Sbjct: 1 MRALWTAASGMKAQQLNIDTVANNMANVNTTAYKAQRTEFKDLLYANMKRTNLNNGQGSP 60 Query: 54 ---QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVT 109 Q V G+ T LD A++G+ + A+E P I TRDG K + Sbjct: 61 VNLQVGHGVMPVATSRMFTTGNLEQTANPLDVAIDGEGFLAIEGPNGEIYYTRDGSLKFS 120 Query: 110 ---DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK----VIATMGLYS 162 D+ LV++ G + D I I ++ + T+ L Sbjct: 121 VEMDEMRLVTSEGYTVLSDFDFEIIFDEGMKNIAISEGGVITAENEFGDIEELDTIKLVK 180 Query: 163 VDMSQGFVRRENSGISPNIPP----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 QG + + + ++ +GFLE SN + EM +MI + Sbjct: 181 FLNPQGLESVGRNLYKETVASGEEIPMEGEGRTSSILQGFLETSNVQIVDEMVKMITAQR 240 Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242 + + + I ++ + N+ Sbjct: 241 AYETSSKTIQTADEMLG-MANNLR 263 >gi|301168504|emb|CBW28094.1| putative flagellar basal-body rod protein [Bacteriovorax marinus SJ] Length = 289 Score = 159 bits (401), Expect = 4e-37, Method: Composition-based stats. Identities = 56/272 (20%), Positives = 106/272 (38%), Gaps = 34/272 (12%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF------ 58 + L+ +A ++++ T+A+N++N +T GF+ ++ F E + + +Q + Sbjct: 16 LWVPLSGAIAQQRKVETIANNVANANTPGFKKDQIVFKEYLTQFEKGYEQDLDLPHKEWK 75 Query: 59 --------------VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDG 104 V + + G TG LD AL+G + + +P G+ TR G Sbjct: 76 PEDFYRSYGAEHAKVKVDGSFTDFQQGQTTPTGNPLDVALKGKGFIEVLTPNGVRYTRKG 135 Query: 105 RFKVTDDGSLVSASGKYPV--------------LDMASVPIQIPQKDEIFNVGEKGEISQ 150 + G LV+ G + IQ+PQ + +GE+S Sbjct: 136 NLSINPAGLLVTDGGNPVLSKIDPALLLAGENLPSPQERTIQLPQNSGRLAINFQGELSN 195 Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEM 210 I+ + + + + NS + V +GF+E SN N++ EM Sbjct: 196 SNGKISDLSIVEFNDIHALKKEGNSFYINEKFENISTAENKTAVYQGFIEQSNVNAIQEM 255 Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 ++I + F SI +I + + + IA Sbjct: 256 SELIKANRNFESIQRVIKTYDTISGKGVNEIA 287 >gi|170737040|ref|YP_001778300.1| flagellar basal-body rod protein FlgG [Burkholderia cenocepacia MC0-3] gi|169819228|gb|ACA93810.1| flagellar basal-body rod protein FlgG [Burkholderia cenocepacia MC0-3] Length = 261 Score = 159 bits (401), Expect = 4e-37, Method: Composition-based stats. Identities = 49/258 (18%), Positives = 94/258 (36%), Gaps = 19/258 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + I A + +L +A+N++N +TVGF+ + F ++ + Sbjct: 1 MNHAMWISKTGIQAQDAKLQAIANNLANVNTVGFKRDRAVFEDMFYRAERQPGAQVSDNA 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFK 107 Q + G+ TG LD A+ G+ + +E P G + TR G+ + Sbjct: 61 TGPGVQLGNGTRIAGTQKVFTTGALQETGQPLDVAVVGNGFLQVEMPNGEVGYTRAGQLR 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG-KVIATMGLYSVDMS 166 + D G L +A G V + P + + K + + L Sbjct: 121 LNDQGRLTNAQGLPLVPGIDIPPEAVGITISENGTVSVSTGAGKTLAEVGQLQLAQFVNP 180 Query: 167 QGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221 G + + + + + T+K+G LE SN ++ EM +MI + + Sbjct: 181 AGLLALGGNLYAETVASGAPTESEPGQNGIGTIKQGALEGSNVLAVEEMVEMIAAQRTYE 240 Query: 222 SITTLIDENEKSMLEAIR 239 T ++ + M + Sbjct: 241 MNTKVLSAADNMMQYLSQ 258 >gi|119947175|ref|YP_944855.1| flagellar basal-body rod protein FlgG [Psychromonas ingrahamii 37] gi|119865779|gb|ABM05256.1| flagellar basal-body rod protein FlgG [Psychromonas ingrahamii 37] Length = 261 Score = 159 bits (401), Expect = 4e-37, Method: Composition-based stats. Identities = 47/259 (18%), Positives = 99/259 (38%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M ++ I A + +++ +++N++N +TVGF+ +V F ++ +I+ Sbjct: 1 MNSALWISKTGMAAQDAKMTAISNNLANINTVGFKRDRVVFEDLFYSIQKQPGASVDGQN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106 Q + V GS +T ELD A+ G +F +E+ I+ +R+G+F Sbjct: 61 KLPTGLQLGNGVRVVGTQKVYTQGSIQNTSQELDLAILGAGFFQIENSDGTIMFSRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 + +G V+ G + + I V + + I + L + Sbjct: 121 HLNAEGQFVNTQGLSLIPQVNVPQGATSVSIAIDGKVSAVIPGQTELEQIGEITLVTFMN 180 Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + S + +K+G LE SN + EM MI + + Sbjct: 181 PSGLMAKGGNLFSATESSGAANELTAGLDGAGIIKQGALEGSNVQVVEEMVDMISTQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 ++ ++ + + Sbjct: 241 EMSAKMVSAADEMLKYIAQ 259 >gi|294084416|ref|YP_003551174.1| flagellar basal-body rod protein FlgG [Candidatus Puniceispirillum marinum IMCC1322] gi|292663989|gb|ADE39090.1| flagellar basal-body rod protein FlgG [Candidatus Puniceispirillum marinum IMCC1322] Length = 262 Score = 159 bits (401), Expect = 4e-37, Method: Composition-based stats. Identities = 45/259 (17%), Positives = 92/259 (35%), Gaps = 20/259 (7%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------- 55 +S ++ A + R+ +A+N++N +T GF+ + F ++ ++ ++ Sbjct: 4 SSMHVAKTGLNAQQTRMQVIANNLANVNTTGFKRDRANFETLLYQVRRSAGEETSADTDL 63 Query: 56 ------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKV 108 + GS I T LD A+EG +F + P I TR+G F Sbjct: 64 TSAFAVGTGARIVNTQKMMSQGSMIQTDNSLDLAIEGSGFFQVLLPDGQIGYTRNGSFST 123 Query: 109 TDDGSLVSASGKYPVLDMASV-PIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 +G+L + SG ++ V + + + M + + + Sbjct: 124 NAEGTLTTPSGYVLQPEIQIPGNASQINISGDGIVSVIVAGEIEPQNVGQMTIADFNNRR 183 Query: 168 GFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222 G S ++ + +G LE SN N + E+ MI + + Sbjct: 184 GLQPIGESFSIETAASGAAIIANPQEQGFGKLVQGSLEASNVNVVQELVNMIETQRAYEV 243 Query: 223 ITTLIDENEKSMLEAIRNI 241 + I ++ + N+ Sbjct: 244 SSKSITSVDEMLRFISNNL 262 >gi|315185553|gb|EFU19322.1| fagellar hook-basal body protein [Spirochaeta thermophila DSM 6578] Length = 269 Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats. Identities = 51/265 (19%), Positives = 99/265 (37%), Gaps = 36/265 (13%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND---------------ID 53 + R+ +A+N++N D G++ F E++ ND + Sbjct: 1 MASQLNRMDAIANNLANVDLTGYKRDTAIFKAFPELLIRRMNDKYFKVPWGSIDNTPVVG 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113 + + V + + Y E G T FALEG +F + +P+G TR+G F + +G Sbjct: 61 KLGTGVETNEVYTVFEQGPLKETKDPFHFALEGQGFFTVLTPQGERYTRNGSFILGPEGL 120 Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGE----------------ISQKGKVIAT 157 LV+ G V + + I+ + + +++ Sbjct: 121 LVTKEGYPVVGENGLIHIKANNFVVDEDGRIFQNARFAEDPDRLVALEENEWDETELVDR 180 Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPLE--DLSGVTVKRGFLEDSNANSMYEMGQMIH 215 + + +V + ++ +S E V++GFLE SN N + EM QMI Sbjct: 181 LKIVNVRRPRYLQKQGDSLWRTTRESGEAEILQDGRPKVRQGFLEGSNVNPVTEMVQMIE 240 Query: 216 LTQKFNSITTLIDENEKSMLEAIRN 240 + + + + I+ + + I Sbjct: 241 VNRAYEANQKTIETQDSLLGRLINE 265 >gi|261407975|ref|YP_003244216.1| fagellar hook-basal body protein [Paenibacillus sp. Y412MC10] gi|261284438|gb|ACX66409.1| fagellar hook-basal body protein [Paenibacillus sp. Y412MC10] Length = 274 Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats. Identities = 46/271 (16%), Positives = 96/271 (35%), Gaps = 32/271 (11%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ + +L + +N++N +TVGF+ +V F +++ + + Sbjct: 1 MLRSMYSGISGMRGFQTKLDVIGNNIANVNTVGFKAGRVMFKDILSQTMSGVTPGTDDPS 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI---ILTRDG 104 Q V+ G GS + T D ++GD +F ++ LTR G Sbjct: 61 GGVNAKQIGLGVSIGSIDTLHTPGSAMMTNNPRDLRIDGDGFFMVKLSEDQEVPFLTRAG 120 Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI----ATMGL 160 F + +LV++ G + + I + A +G+ Sbjct: 121 DFHIDVARNLVTSDGMLVLDSAGDPIQLDEEVTSFTIAQNGAIIQKMSDGTTEEGAIIGV 180 Query: 161 YSVDMSQGFVRRENSGISPNIPPTP------------LEDLSGVTVKRGFLEDSNANSMY 208 + +G + + + P + + G LE SN + Sbjct: 181 AKIPNPEGLEKIGGNMYRVTLNAVPDGDLAAVMFEGNNAEEGTGAIIAGQLEMSNVDLTG 240 Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E +MI + F + + +I +++ + E + Sbjct: 241 EFSEMIVAQRGFQANSRIITTSDEVLQEVVN 271 >gi|322432975|ref|YP_004210224.1| flagellar basal-body rod protein FlgG [Acidobacterium sp. MP5ACTX9] gi|321165202|gb|ADW70906.1| flagellar basal-body rod protein FlgG [Acidobacterium sp. MP5ACTX9] Length = 263 Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats. Identities = 50/262 (19%), Positives = 96/262 (36%), Gaps = 22/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + L +A+N++N+ T GF+ ++ FS+++ Sbjct: 1 MIRALYTAASGMTAQQLNLDNIANNLANSSTTGFQQRRLAFSDMLYQNTTSPGSAATQQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q V + G F STG LD A+ G +F + P +R G F Sbjct: 61 TNAAGLQVGLGVRPTSTETIQTQGDFNSTGNPLDLAISGGGFFQVLLPNGQTGYSRSGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 + G++V+A G + P V + + I ++ + Sbjct: 121 HMDSTGNVVTADGNPLQPAITIPPDATNITIGSDGTVSVVQPGTTQSAQIGSIQMALFVN 180 Query: 166 SQGFVRRENS------GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G N+ I TP T+++G LE SN + + E +MI + Sbjct: 181 PGGLNSVGNNIYLATTASGDPIIGTPGGSEGLGTIQQGTLEASNVSVVDEFVEMIVAQRS 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + S + ++ ++ M + + + Sbjct: 241 YESNSRVVKAADEMMQQ-LNQL 261 >gi|138896905|ref|YP_001127358.1| flagellar basal-body rod protein [Geobacillus thermodenitrificans NG80-2] gi|134268418|gb|ABO68613.1| Flagellar basal-body rod protein [Geobacillus thermodenitrificans NG80-2] Length = 345 Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats. Identities = 55/276 (19%), Positives = 106/276 (38%), Gaps = 37/276 (13%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTI---KVKFSEVVG----------- 46 M + LA ++R+ + +N++N +T G++ F E++ Sbjct: 70 MLRGLYTAASGMLAQQRRVDWLTNNLANAETPGYKADAGAMRAFPELLMNRLEDESIPSA 129 Query: 47 -----AIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFAL-------------EGDA 88 + I + V + + + G TG D AL G Sbjct: 130 PPRAVPTQTAIGLLNTGVYTQELIPNFRQGDIKETGLSTDVALVDGQVPVDPTTGERGTL 189 Query: 89 WFALESPR-GIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGE 147 +FA+E+ + TR+G F ++ D L + G Y + +I E F V + G Sbjct: 190 FFAVENDQGETRYTRNGHFTLSPDDYLTTQDGWYVL---DGNGERIAIPSESFTVRDDGT 246 Query: 148 ISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-TVKRGFLEDSNANS 206 I+ + + IA +G+ + V+ N P P + VK+GF+E SN + Sbjct: 247 ITAENRTIARLGVVFAANPKTVVKEGNGLFRSTDGPLPQAPGNVTYMVKQGFIERSNVDI 306 Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 M ++ + F + +I ++S+ +A+ + Sbjct: 307 ERTMTDLLAAYRAFEANQKIIQAYDRSLDKAVNEVG 342 >gi|54294165|ref|YP_126580.1| flagellar basal body rod protein FlgG [Legionella pneumophila str. Lens] gi|54297184|ref|YP_123553.1| flagellar basal body rod protein FlgG [Legionella pneumophila str. Paris] gi|148358808|ref|YP_001250015.1| flagellar basal body rod protein FlgG [Legionella pneumophila str. Corby] gi|296106853|ref|YP_003618553.1| flagellar basal-body rod protein FlgG [Legionella pneumophila 2300/99 Alcoy] gi|53750969|emb|CAH12380.1| flagellar biosynthesis protein FlgG [Legionella pneumophila str. Paris] gi|53753997|emb|CAH15468.1| flagellar biosynthesis protein FlgG [Legionella pneumophila str. Lens] gi|148280581|gb|ABQ54669.1| flagellar basal body rod protein FlgG [Legionella pneumophila str. Corby] gi|295648754|gb|ADG24601.1| flagellar basal-body rod protein FlgG [Legionella pneumophila 2300/99 Alcoy] gi|307609979|emb|CBW99508.1| flagellar biosynthesis protein FlgG [Legionella pneumophila 130b] Length = 261 Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats. Identities = 47/261 (18%), Positives = 92/261 (35%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M+ + + + A ++ ++T+A+N++N +T F+ + F +++ Sbjct: 1 MEPALWVSKSGLEAQDKNIATIANNLANVNTTAFKKGRALFEDLIYQNLRQAGAQSSQNS 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 + V GS +T LD A+EG +F + P G TRDG F Sbjct: 61 QIPTGINMGTGVHLVATEKIFSQGSLQNTQNALDVAIEGRGFFTVLMPDGTQAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 K G +V+++G ++ P V + VI + L Sbjct: 121 KTDSTGQIVNSNGYPLQPNITIPPQTTKITIGTDGTVSALVAGNNAPSVIGNIQLTDFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + T+ +G LE SN N + E+ MI + + Sbjct: 181 PAGLQPIGQNLYTETVASGTPITDNPGNSGLGTLLQGSLEASNVNVVEELVNMIQAQRSY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 I + + + + Sbjct: 241 EITAKSIQTVDSMLQYLTQTL 261 >gi|288553056|ref|YP_003424991.1| flagellar basal body rod protein FlgG [Bacillus pseudofirmus OF4] gi|288544216|gb|ADC48099.1| flagellar basal body rod protein FlgG [Bacillus pseudofirmus OF4] Length = 279 Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats. Identities = 53/266 (19%), Positives = 102/266 (38%), Gaps = 27/266 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G++ + +L + +N+SN +T GF+ + FS++V Sbjct: 11 MLRSMYSGISGMRNFQTKLDVIGNNISNVNTAGFKKGRTTFSDMVSQQIAGASGPVVNGR 70 Query: 49 -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA---LESPRGIILTRDG 104 + Q GS +T LD + G+ +F E+ +R G Sbjct: 71 GGTNPRQVGLGSQLATIDTIHTQGSLQNTNRSLDLGISGNGYFRLSDSETGGTTYYSRAG 130 Query: 105 RFKVTDDGSLVSASGKYPVLD-MASVPIQIPQKDEIFNVGEKGEISQKGKV-----IATM 158 F + +DG +V+A+G Y + D IQI + F++G+ G ++ T+ Sbjct: 131 NFYLDEDGYIVNANGLYLLDDSDPGSRIQIAPDSQSFSIGQAGVVNVIDSAGQLTSPGTI 190 Query: 159 GLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQM 213 L +G + ++ + + + G LE SN + E +M Sbjct: 191 SLAYFSNPEGLQKEGDNLYQVTDNSGAAQRTTPTNDGTGALVAGTLEMSNVDLSEEFTEM 250 Query: 214 IHLTQKFNSITTLIDENEKSMLEAIR 239 I + F + T +I +++ + E + Sbjct: 251 IVAQRGFQANTRIITTSDEILQELVN 276 >gi|225181585|ref|ZP_03735026.1| flagellar basal body rod protein [Dethiobacter alkaliphilus AHT 1] gi|225167693|gb|EEG76503.1| flagellar basal body rod protein [Dethiobacter alkaliphilus AHT 1] Length = 251 Score = 158 bits (400), Expect = 5e-37, Method: Composition-based stats. Identities = 49/255 (19%), Positives = 95/255 (37%), Gaps = 18/255 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA------------I 48 M + + R T+ +N++N++T GF+ + Sbjct: 1 MIRGLYTAASGMMVESTRQETITNNLANSETTGFKRDLALQRSHGEQPVVRLGDRQPFGV 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 + I + S E GS TG +LD A+ GD +F +E+ +G+ TR+G F + Sbjct: 61 RPVIGSLGVGSLIDGIHTSHEQGSLQETGRDLDVAMAGDGYFVVETEQGLRYTRNGAFSI 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 D LV+ G + + + + G + + + S + Sbjct: 121 DADRMLVNDQGHRVM----GTTGPLQLPAGEVQIDQAGNVFVNDAMQGQLARVSFADNSE 176 Query: 169 FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228 + +S + VK+GFLE SN ++ EM QM+ + + + ++ Sbjct: 177 LQKVGDSLF--TAAEGAEQQPVTGMVKQGFLEGSNVQAVQEMVQMLAAMRAYETNQRVVQ 234 Query: 229 ENEKSMLEAIRNIAS 243 + + +A IA+ Sbjct: 235 AQDDMLRKATNEIAA 249 >gi|167576664|ref|ZP_02369538.1| flagellar basal body rod protein FlgG [Burkholderia thailandensis TXDOH] Length = 258 Score = 158 bits (400), Expect = 5e-37, Method: Composition-based stats. Identities = 49/251 (19%), Positives = 90/251 (35%), Gaps = 20/251 (7%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID----------- 53 I A + +L VA+N++N +TVGF+ +V F ++ ++ Sbjct: 1 MWISKTGLQAQDAKLQAVANNLANVNTVGFKRDRVVFEDLFYRVERQPGAQLDQDNASPS 60 Query: 54 --QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTD 110 Q S GS +TG LD A+ G + + G TR G+ + Sbjct: 61 GIQMGSGTRIVGTQKVFTDGSVQTTGRSLDVAVTGKGFLQVLMANGETGYTRAGQLSINA 120 Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169 +G LV+A G +++ E V + + + L + G Sbjct: 121 EGLLVNAQGLPLQPEISIPENATDIAIGENGIVAATMPGASSPSEVGQLQLANFVNPAGL 180 Query: 170 VRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224 + ++ + P + T +K+G LE SN + EM MI + + T Sbjct: 181 LALGDNLYMETVASGPPNEGEAGTDVFGKIKQGALEGSNVQVVEEMVDMIAAQRTYEMNT 240 Query: 225 TLIDENEKSML 235 ++ + + Sbjct: 241 KVLSAADNMLQ 251 >gi|319403961|emb|CBI77549.1| Flagellar basal-body rod protein flgG [Bartonella rochalimae ATCC BAA-1498] gi|319406976|emb|CBI80613.1| Flagellar basal-body rod protein flgG [Bartonella sp. 1-1C] Length = 264 Score = 158 bits (400), Expect = 5e-37, Method: Composition-based stats. Identities = 43/262 (16%), Positives = 91/262 (34%), Gaps = 21/262 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55 S +I A + L +A+NM+N +T GF+ + +F++++ + Sbjct: 3 MKSLSIAATGMAAQQTNLDVIANNMANINTTGFKRGRAEFADLMYVADRAVGVPNMLNQA 62 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 V + G+F+ TG LD A+ G+ WF ++ P + TR G F Sbjct: 63 VIPEGAMIGMGVRTAAVRTINTQGAFVQTGNALDLAINGNGWFEIQDPNGNVFYTRSGAF 122 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-IATMGLYSVDM 165 +++ G +V+ G + + V L + Sbjct: 123 NLSETGQIVTLEGNLVQPVITIPIGSKNVTVSPDGTVYYQTDTDPNAVEAGRFRLVNFVN 182 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ ++ + LE SN + + EM ++I + + Sbjct: 183 EVGLEPIGDNLFRETQASGAPVPGDPKEDGYGSIMQAMLEASNVDPVKEMTELIAAQRSY 242 Query: 221 NSITTLIDENEKSMLEAIRNIA 242 + +I +++ +N+ Sbjct: 243 EMNSKVIQASDEMAAVVSKNLR 264 >gi|188579867|ref|YP_001923312.1| flagellar basal body rod protein FlgG [Methylobacterium populi BJ001] gi|179343365|gb|ACB78777.1| flagellar basal-body rod protein FlgG [Methylobacterium populi BJ001] Length = 262 Score = 158 bits (400), Expect = 5e-37, Method: Composition-based stats. Identities = 46/256 (17%), Positives = 88/256 (34%), Gaps = 21/256 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55 + I A + L +A+N++N +T GF+ + +F++++ + Sbjct: 1 MRALAIAATGMSAQQLNLEVIANNIANLNTTGFKGARAEFTDLLYQAERQQGAPNQAGQE 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 V + GS +TG +LD A+ G +F + SP G I TR G F Sbjct: 61 AVPEGAMLGLGVRAAAIRNLHRQGSLANTGNQLDLAVNGRGYFQITSPAGEINYTRAGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE-KGEISQKGKVIATMGLYSVDM 165 + G LV+ G + K + + I + L + Sbjct: 121 NKNNAGQLVTMEGYAVDPAILIPANTTQVTINESGQVFAKTDGQVALQNIGQLTLANFAN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLS-----GVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G N + +++G+LE SN + + E+ +I + F Sbjct: 181 ESGLEPLGNGLYRETPASGAPVVGNPGDVSYGKLQQGYLEGSNVDPVKEITSLITAQRAF 240 Query: 221 NSITTLIDENEKSMLE 236 + +I ++ Sbjct: 241 EMNSKVIQAADEMAGT 256 >gi|323498418|ref|ZP_08103414.1| flagellar basal body rod protein FlgG [Vibrio sinaloensis DSM 21326] gi|323316491|gb|EGA69506.1| flagellar basal body rod protein FlgG [Vibrio sinaloensis DSM 21326] Length = 262 Score = 158 bits (400), Expect = 5e-37, Method: Composition-based stats. Identities = 46/262 (17%), Positives = 94/262 (35%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + + A + +ST+++N++N TVG++ + F ++ N + Sbjct: 1 MHPALWVSKTGLDAQQTNISTISNNLANASTVGYKKSRAVFEDLFYQNINQPGGQSSQNT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + G+ +T LD +EGD +F + P I +R+G+F Sbjct: 61 ELPTGLMLGAGSKVVATQKVHTQGNTQTTNNSLDMMIEGDGFFQILMPDGNIGYSRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD--EIFNVGEKGEISQKGKVIATMGLYSVD 164 V D+G++V++ Y + +P V + Q V+ + Sbjct: 121 TVNDEGAIVTSGAGYGLEPEIVIPEDAISITVGTDGEVSVRIRGEQNNVVVGQITTVDFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + P ++ +++ LE SN N E+ MI + Sbjct: 181 NPGGLEPIGQNLYLPTGASGDPQEGVPGFDGFGDIRQSMLETSNVNVTEELVNMIEAQRV 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I +K M + + Sbjct: 241 YEMNSKVISAVDKMMSFVNQQL 262 >gi|315125986|ref|YP_004067989.1| flagellar basal-body rod FlgG [Pseudoalteromonas sp. SM9913] gi|315014500|gb|ADT67838.1| flagellar basal-body rod FlgG [Pseudoalteromonas sp. SM9913] Length = 261 Score = 158 bits (400), Expect = 5e-37, Method: Composition-based stats. Identities = 44/261 (16%), Positives = 100/261 (38%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M ++ + A + R++T+++N++N T GF+ + F ++ ++ Sbjct: 1 MNSALWVSKTGLAAQDLRMTTISNNLANVSTAGFKKDRAVFEDLFYQVQKQPGAQVDELN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V GSF +T +LD A+ G +F +ESP G + TR+G+F Sbjct: 61 QLPSGIQVGTGVRINGTQKQFTEGSFETTSNQLDVAIAGQGFFQIESPDGELLFTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 ++ + LV+++G ++A V + + M + Sbjct: 121 QLNSESLLVNSNGLPLAQNIALPEGTTKVSIGTDGTVTAVVGKDAQAVELGQMLTVNFAN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + +++ +E SN + + EM MI + + + Sbjct: 181 PAGLQSLGGNLYRETAASGEPVEGIPGEDAFGGLQQFTIEGSNVSVVDEMVSMIAVQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 ++ ++ + +N+ Sbjct: 241 EMNAKVVSAADEMLRFINQNV 261 >gi|254292905|ref|YP_003058928.1| flagellar basal body rod protein FlgG [Hirschia baltica ATCC 49814] gi|254041436|gb|ACT58231.1| flagellar basal-body rod protein FlgG [Hirschia baltica ATCC 49814] Length = 261 Score = 158 bits (400), Expect = 5e-37, Method: Composition-based stats. Identities = 41/259 (15%), Positives = 91/259 (35%), Gaps = 21/259 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + + A + + +++N++N +T G++ + +F +++ + Sbjct: 1 MRALSTAATGMQAQQLNVEVISNNIANMNTTGYKRQRAEFQDLLYTNMEKMGVSSSDANT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V +G Y E G T D A++GD +F ++ P TR G F Sbjct: 61 IVPTGVQIGTGVKAGSVYRITEQGPVQQTSNSYDVAMQGDGYFIVQLPDGRDAYTRAGNF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-IATMGLYSVDM 165 V DG +V+ G + + + + L Sbjct: 121 SVNGDGQIVTEDGYTVSPGINVPEDTLSVTINAQGTVTATTAGATDPTDLGALELARFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ + + T+ +GFLE SN N++ E+ +I+ + + Sbjct: 181 PAGLDAIGDNLLLETVASGAANVGQAGALGFGTILQGFLETSNVNAVTEISALINAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + +I ++ + + Sbjct: 241 EMNSKVITATDEMLQTTSQ 259 >gi|300024616|ref|YP_003757227.1| flagellar basal-body rod protein FlgF [Hyphomicrobium denitrificans ATCC 51888] gi|299526437|gb|ADJ24906.1| flagellar basal-body rod protein FlgF [Hyphomicrobium denitrificans ATCC 51888] Length = 240 Score = 158 bits (400), Expect = 5e-37, Method: Composition-based stats. Identities = 78/242 (32%), Positives = 130/242 (53%), Gaps = 4/242 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 MQ++ +GL+AQLAL++RL TVA+N++N T G+R ++ F EV+ +SFV+ Sbjct: 1 MQSNIYVGLSAQLALQRRLDTVANNVANAGTAGYRAEQMSFEEVLSKSG---QTAVSFVS 57 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 G+ +LS E G T LD A+ GDAW A+++P G TRDGR ++ DG +++ Sbjct: 58 QGRTHLSTEGGEITQTDNPLDIAVRGDAWLAIQTPTGPAYTRDGRMQMRADG-VLTNLSG 116 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 P LD P+Q+ + + G I Q G + GLY + R + + + Sbjct: 117 DPFLDAGGSPVQLDPDGGRITINKAGTIVQDGNNLGAFGLYRMPQGANLTRGHGASVITD 176 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 P D V +G++E SN N + EM + L + F++++ ++ E E S+ ++++ Sbjct: 177 QAAVPEIDFLRTGVVQGYVEKSNVNPILEMTHLTTLQRSFDAVSNVLRETESSLQDSLKT 236 Query: 241 IA 242 IA Sbjct: 237 IA 238 >gi|332298513|ref|YP_004440435.1| flagellar basal-body rod protein FlgF [Treponema brennaborense DSM 12168] gi|332181616|gb|AEE17304.1| flagellar basal-body rod protein FlgF [Treponema brennaborense DSM 12168] Length = 265 Score = 158 bits (400), Expect = 5e-37, Method: Composition-based stats. Identities = 54/264 (20%), Positives = 101/264 (38%), Gaps = 24/264 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKND------ 51 M + IG + A + RL +++N++N DT ++ F E++ ND Sbjct: 1 MVRGWYIGSSGMNAQQNRLDAISNNLANADTTAYKRDVTVSKSFPELLMRRMNDDGVYRT 60 Query: 52 ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101 + + V + + Y E GSF T ++ D AL G+ +FA+++P G T Sbjct: 61 PFGSADAAPIVGKIGLGVETNELYTDFEQGSFKQTSSKADMALSGEGFFAVQTPAGERYT 120 Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLY 161 R+G F + +G L + G + + I++ N + ++I + Sbjct: 121 RNGNFMIGKEGILETKEGYPVLG--ENGYIRVNDDSFTVNPDGMIYSADDMELIDRFKVV 178 Query: 162 SVDMSQGFVRRENSGISPNI---PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 D + + +S E +G+ E SN N + EM MI + + Sbjct: 179 RFDNERYLQKMGSSLYKNTDISGEAYIAEGKERPAFIQGYTETSNVNVVNEMVSMIEVNR 238 Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242 + + I + M +A Sbjct: 239 AYEANQKTIQTEDTMMSTLWGKVA 262 >gi|260437439|ref|ZP_05791255.1| flagellar basal-body rod protein FlgG [Butyrivibrio crossotus DSM 2876] gi|292810071|gb|EFF69276.1| flagellar basal-body rod protein FlgG [Butyrivibrio crossotus DSM 2876] Length = 284 Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats. Identities = 53/283 (18%), Positives = 102/283 (36%), Gaps = 43/283 (15%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--------- 51 M + + +A + + +++N++N ++ G++ +F ++ Sbjct: 1 MMRALYTAASGMIAQQTNVDVISNNLANVNSTGYKASTAEFKSLLYQTLQSRSTSANGDD 60 Query: 52 ---IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFK 107 Q + + GS I + + F LEGD F L +P I+ TR+G F Sbjct: 61 KPIPAQVGTGARTAAITTHFSQGSLIDSTSTFAFGLEGDGLFGLMNPDGEIVYTRNGDFT 120 Query: 108 ---VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI--------- 155 D G ++ +S YPV+D PIQ + ++ N+ + S +VI Sbjct: 121 VGKTNDGGFMICSSDGYPVVDSDGNPIQFSGEYDVSNLVITSDGSFYYRVIEEKPDENGN 180 Query: 156 -----------ATMGLYSVDMSQGFVRRENSGISPN-IPPTPLEDLSG-----VTVKRGF 198 MG++ G +S +E+ + V +G Sbjct: 181 MHKTERLDDLETRMGVFQFTNPSGLDSIGSSLYKETEASGIAMEEGTYTELKRTKVCQGR 240 Query: 199 LEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 LE SN EM +I + + + I + + +A + Sbjct: 241 LEASNVQVADEMVNLIVAQRAYEMNSKAIQAADDMLGQA-NQL 282 >gi|149188068|ref|ZP_01866363.1| polar flagellar FlgG [Vibrio shilonii AK1] gi|148838056|gb|EDL54998.1| polar flagellar FlgG [Vibrio shilonii AK1] Length = 262 Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats. Identities = 45/262 (17%), Positives = 96/262 (36%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + + A + +ST+++N++N T+G++ + F ++ N + Sbjct: 1 MHPALWVSKTGLDAQQTNISTISNNLANASTIGYKKSRAVFEDLFYQNINQPGGQSSQNT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + G+ +T LD +EGD +F + P I +R+G+F Sbjct: 61 ELPSGLMLGAGSKVVATQKIHTPGNAQTTTNSLDMMIEGDGFFQVLMPDGNIGYSRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD--EIFNVGEKGEISQKGKVIATMGLYSVD 164 + D+G++V++ Y + ++P V + Q +V+ + Sbjct: 121 TLNDEGTIVTSGSGYALEPEIAIPEDAISITVGTDGEVSVRVRGQQDNQVVGNITTVDFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + P + +++ LE SN N E+ MI + Sbjct: 181 NPGGLEPIGQNLYLPTGASGDPNEGVPGLDGFGQIRQSMLETSNVNVTEELVNMIEAQRV 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I +K M A + + Sbjct: 241 YEMNSKVISSVDKMMSFANQQL 262 >gi|86146153|ref|ZP_01064479.1| polar flagellar FlgG [Vibrio sp. MED222] gi|218708806|ref|YP_002416427.1| flagellar basal body rod protein FlgG [Vibrio splendidus LGP32] gi|85836100|gb|EAQ54232.1| polar flagellar FlgG [Vibrio sp. MED222] gi|218321825|emb|CAV17796.1| Flagellar basal-body rod protein flgG [Vibrio splendidus LGP32] Length = 262 Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats. Identities = 46/262 (17%), Positives = 94/262 (35%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + + A + +ST+++N++N T+GF+ + F ++ N + Sbjct: 1 MHPALWVSKTGLDAQQTNISTISNNLANASTIGFKKSRAVFEDLFYQNINQPGGQSSQNT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 + G+ +T LD +EGD +F +E P G +R+G+F Sbjct: 61 ELPSGLMLGAGSKVVATQKVHTHGNAQTTSNSLDMMIEGDGFFQVEMPDGETGYSRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG--EISQKGKVIATMGLYSVD 164 + DG++V++ Y + +P + Q V+ + + Sbjct: 121 TLNGDGAIVTSGQGYALQPEIVIPEDAISVTVGNDGEVSVRLRGQQDNVVVGQITITDFV 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + P ++ V++ LE SN N E+ MI + Sbjct: 181 NPGGLEPIGQNLYLPTGASGDPQEGVPGLNGLGNVRQSMLEASNVNVTEELVNMIEAQRV 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I +K M + + Sbjct: 241 YEMNSKVISAVDKMMSFVNQQL 262 >gi|296122947|ref|YP_003630725.1| flagellar basal-body rod protein FlgG [Planctomyces limnophilus DSM 3776] gi|296015287|gb|ADG68526.1| flagellar basal-body rod protein FlgG [Planctomyces limnophilus DSM 3776] Length = 266 Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats. Identities = 48/262 (18%), Positives = 92/262 (35%), Gaps = 23/262 (8%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------- 55 + + A L T+A+N++N T GF+ + F ++ + Sbjct: 4 RAMYTAASGMQAYMFNLDTIANNLANAGTNGFKRSRTDFEDLYYQYYKLPGTQDTLGNYT 63 Query: 56 ------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109 V + G+ + TG +LD A+ GD +F + + TR G F V Sbjct: 64 PIGTAAGLGVRVAGTQIDFSQGALLETGRQLDMAITGDGFFMVRGNNQLFYTRRGEFTVN 123 Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG----KVIATMGLYSVDM 165 +G +V AS L + I D + + Q G + + L Sbjct: 124 SNGDVVLASADIGRLIDPPINIPPDTVDIGISAEGIVSVIQAGSTVQNQVGQIQLARFIN 183 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 +G + S + + +++GFLE SN E+ +I + Sbjct: 184 PEGLYQAGESLYAVTDASGQPLISNPGDQGLGLIRQGFLEISNVEPANELVDLIKTQRNV 243 Query: 221 NSITTLIDENEKSMLEAIRNIA 242 + +I +++ + + I N+ Sbjct: 244 ELNSQVIQASDQLL-QLITNLR 264 >gi|146278638|ref|YP_001168797.1| flagellar basal body rod protein FlgF [Rhodobacter sphaeroides ATCC 17025] gi|145556879|gb|ABP71492.1| Flagellar hook protein FlgE-like protein [Rhodobacter sphaeroides ATCC 17025] Length = 239 Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats. Identities = 62/242 (25%), Positives = 107/242 (44%), Gaps = 6/242 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + L Q L + + ++A+N++N T GFR V F+E V + D + +S + Sbjct: 1 MDAAGYTTLTRQSGLMREMQSIANNIANLSTTGFRREGVVFTEHVKRL--DGEASLSMAS 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + ++ G TG DFA+ GD +F +E+P+G LTR G F +G LV G Sbjct: 59 ASARHVDLSQGGLTHTGATFDFAIMGDGFFLIETPQGEHLTRAGSFTPDAEGELVDMDGN 118 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 LD P+ IP + G +S G+ I +GL+ + S Sbjct: 119 RL-LDEGGAPVFIPPDARDVVLASDGTLSSGGQPIGRIGLWQPTEPLDLRHEGGTRFSAE 177 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 P +G ++ +G LE+SN + E+ +MI + + + +D + + +R Sbjct: 178 AGVEP---AAGASLIQGSLEESNVAPISEISRMIEVQRAYELGQGFLDREDDRIRNTVRI 234 Query: 241 IA 242 + Sbjct: 235 LG 236 >gi|84388093|ref|ZP_00990989.1| Flagellar basal body rod protein FlgG [Vibrio splendidus 12B01] gi|84377160|gb|EAP94030.1| Flagellar basal body rod protein FlgG [Vibrio splendidus 12B01] Length = 262 Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats. Identities = 45/262 (17%), Positives = 94/262 (35%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + + A + +ST+++N++N T+GF+ + F ++ N + Sbjct: 1 MHPALWVSKTGLDAQQTNISTISNNLANASTIGFKKSRAVFEDLFYQNINQPGGQSSQNT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 + G+ +T LD +EGD +F +E P G +R+G+F Sbjct: 61 ELPSGLMLGAGSKVVATQKVHTHGNAQTTSNSLDMMIEGDGFFQVEMPDGETGYSRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG--EISQKGKVIATMGLYSVD 164 + DG++V++ Y + +P + Q V+ + + Sbjct: 121 TLNGDGAIVTSGQGYALQPEIVIPEDAISVTVGNDGEVSVRLRGEQNNVVVGQITITDFV 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + P ++ +++ LE SN N E+ MI + Sbjct: 181 NPGGLEPVGQNLYLPTGASGDPQEGVPGFDGLGNIRQSMLETSNVNVTEELVNMIEAQRV 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I +K M + + Sbjct: 241 YEMNSKVISSVDKMMSFVNQQL 262 >gi|329849714|ref|ZP_08264560.1| flagellar basal-body rod protein FlgG [Asticcacaulis biprosthecum C19] gi|328841625|gb|EGF91195.1| flagellar basal-body rod protein FlgG [Asticcacaulis biprosthecum C19] Length = 263 Score = 158 bits (399), Expect = 7e-37, Method: Composition-based stats. Identities = 42/259 (16%), Positives = 91/259 (35%), Gaps = 21/259 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + A + + +++N++N +TVGF+ + +F +++ + Sbjct: 1 MRALRTATTGMAAQQLNVEVISNNIANMNTVGFKKQRAEFQDLLYQNIERMGSQSSDAGT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V +G Y + GS T + D A+EG +F + P TR G F Sbjct: 61 VVPTGIQVGAGVKAGSVYRIMQQGSMTLTQNQYDVAIEGKGYFQILMPSGETAYTRAGNF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 V D G LV+ G + I + + + + + Sbjct: 121 SVDDQGRLVTEDGYLVQPSVTIPQDAIDVSISKTGQIQATQQGQTAPTTVGQLQTATFFN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ + T+ +G+ E SN +++ E+ +I + + Sbjct: 181 EAGLDAIGDNLFLESGASGAPNVSTPGDVGFGTLLQGYTEASNVDAVGEITALIVAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + +I ++ + A + Sbjct: 241 EMNSKVITTADQMLQTASQ 259 >gi|83944162|ref|ZP_00956618.1| flagellar basal-body rod protein FlgG [Sulfitobacter sp. EE-36] gi|83845029|gb|EAP82910.1| flagellar basal-body rod protein FlgG [Sulfitobacter sp. EE-36] Length = 261 Score = 158 bits (399), Expect = 7e-37, Method: Composition-based stats. Identities = 46/261 (17%), Positives = 95/261 (36%), Gaps = 22/261 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ------- 54 + I LA + + +A+N++N +T GF++ + F ++V Sbjct: 1 MKALGIAATGMLAQQTNVDVIANNIANANTTGFKSGRAAFQDLVYQSFASAGSLTSEEGT 60 Query: 55 -------KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 V + G I T +LD A+EG +F + P G TRDG F Sbjct: 61 ARPVGTDIGLGVQAAGVIRHNIQGGLIQTENQLDLAIEGRGYFTVNRPDGTQAFTRDGNF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVP-IQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 +++ +G LV+ +G + + + ++ V E + + + + Sbjct: 121 QLSAEGQLVTLNGYEVEPAIIVPELTRQVEINQEGVVMAYVENDPEPVELGQLNFATFLN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ + T ++G+LE SN N + ++ +I + + Sbjct: 181 EAGLKPVGDNLMEQTAASGEPVQNVPGTPGVGITRQGYLEQSNVNIIQQITDLISAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + I+ ++ M I Sbjct: 241 EMNSKAIETADQIM-TTTNQI 260 >gi|52841453|ref|YP_095252.1| flagellar basal body rod protein FlgG [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52628564|gb|AAU27305.1| flagellar basal body rod protein FlgG [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 261 Score = 158 bits (399), Expect = 7e-37, Method: Composition-based stats. Identities = 47/261 (18%), Positives = 92/261 (35%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M+ + + + A ++ ++T+A+N++N +T F+ + F +++ Sbjct: 1 MEPALWVSKSGLEAQDKNIATIANNLANVNTTAFKKGRALFEDLIYQNLRQAGAQSSQNS 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 + V GS +T LD A+EG +F + P G TRDG F Sbjct: 61 QIPTGINMGTGVHLVATEKIFSQGSLQNTQNALDVAIEGRGFFTVLMPDGTQSYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 K G +V+++G ++ P V + VI + L Sbjct: 121 KTDSTGQIVNSNGYPLQPNITIPPQTTKITIGTDGTVSALVAGNNAPSVIGNIQLTDFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + T+ +G LE SN N + E+ MI + + Sbjct: 181 PAGLQPIGQNLYTETVASGTPITDNPGNSGLGTLLQGSLEASNVNVVEELVNMIQAQRSY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 I + + + + Sbjct: 241 EITAKSIQTVDSMLQYLTQTL 261 >gi|217976225|ref|YP_002360372.1| flagellar basal body rod protein FlgG [Methylocella silvestris BL2] gi|217501601|gb|ACK49010.1| flagellar basal-body rod protein FlgG [Methylocella silvestris BL2] Length = 262 Score = 158 bits (399), Expect = 7e-37, Method: Composition-based stats. Identities = 43/262 (16%), Positives = 92/262 (35%), Gaps = 21/262 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----------- 50 + +I A + ++ +A+N++N +T GF+ + +F++++ + Sbjct: 1 MKALSIAATGMAAQDLNVAVIANNIANINTTGFKRARAEFTDLLYQAERLQGVSSRGQSN 60 Query: 51 ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106 + Q V + G+ +TG +LD+AL G WF + + TR G F Sbjct: 61 TIPEGAQLGLGVRTASIRNLHIQGTLTNTGNKLDWALNGRGWFQVTDANGDTVYTRAGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 G +V++ G M + + V + + + L + Sbjct: 121 NTNGTGQIVTSDGYIVSPTMIVPTNAVDVTVSQSGMVSATLSGQPAPQQLGQISLANFAN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G N+ TV + +LE SN + + E+ +I + + Sbjct: 181 EAGLTPLGNNLYRQTEASGSPIVGVPGDPGFATVSQSYLESSNVDPVKEITDLIAAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNIA 242 + +I + +N+ Sbjct: 241 EMNSKVIQAASEMESTVSKNMG 262 >gi|260429403|ref|ZP_05783380.1| flagellar basal-body rod protein FlgG [Citreicella sp. SE45] gi|260420026|gb|EEX13279.1| flagellar basal-body rod protein FlgG [Citreicella sp. SE45] Length = 261 Score = 158 bits (398), Expect = 7e-37, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 97/259 (37%), Gaps = 21/259 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + I A + R+ +++N+SN T G+ + +F+++ Sbjct: 1 MRALKIAATGMSAQQMRVEVISNNLSNMSTTGYNARRAEFADLHYQQIARAGTINASDGT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 Q + E G+ TG +LD A+EG +F + P GI TRDG Sbjct: 61 MLPTGVQMGLGARPAAVTMKLEQGALSDTGGDLDIAIEGRGYFEVTLPSGIAGYTRDGAL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 K DG +V++ G ++ I V + + +++ + Sbjct: 121 KRNADGMIVTSDGLPVSPEIVIPDDAISLSINAEGEVYAYFADAVQAQLLGQFTIVGFTN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 +G + + P T ++G+LEDS+ + +YE+ ++I + + Sbjct: 181 PKGLEAIGGNLFTETEASGPPIQTTAGQEGLGTFRQGYLEDSSVDPVYEITELIEAQRGY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + +I ++ + ++ Sbjct: 241 ELNSKVISAADQMLGATVQ 259 >gi|83955138|ref|ZP_00963794.1| flagellar basal-body rod protein FlgG [Sulfitobacter sp. NAS-14.1] gi|83840467|gb|EAP79640.1| flagellar basal-body rod protein FlgG [Sulfitobacter sp. NAS-14.1] Length = 261 Score = 158 bits (398), Expect = 7e-37, Method: Composition-based stats. Identities = 46/261 (17%), Positives = 96/261 (36%), Gaps = 22/261 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ------- 54 + I LA + + +A+N++N +T GF++ + F ++V Sbjct: 1 MKALGIAATGMLAQQTNVDVIANNIANANTTGFKSGRAAFQDLVYQSFASAGSLTSEEGT 60 Query: 55 -------KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 V + G I T +LD A+EG +F + P G TRDG F Sbjct: 61 ARPVGTDIGLGVQAAGVIRHNIQGGLIQTENQLDLAIEGRGYFTVNRPDGTQAFTRDGNF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVP-IQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 +++ +G LV+ +G + + + ++ V E + + + + + Sbjct: 121 QLSAEGQLVTLNGYEVEPAIIVPELTRQVEINQEGVVMAYVENAPEPVELGQLNFATFLN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ + T ++G+LE SN N + ++ +I + + Sbjct: 181 EAGLKPVGDNLMEQTAASGEPVQNVPGTPGVGITRQGYLEQSNVNIIQQITDLISAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + I+ ++ M I Sbjct: 241 EMNSKAIETADQIM-TTTNQI 260 >gi|209963565|ref|YP_002296480.1| flagellar basal-body rod protein FlgG [Rhodospirillum centenum SW] gi|209957031|gb|ACI97667.1| flagellar basal-body rod protein FlgG [Rhodospirillum centenum SW] Length = 261 Score = 158 bits (398), Expect = 7e-37, Method: Composition-based stats. Identities = 35/259 (13%), Positives = 94/259 (36%), Gaps = 21/259 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + NI +A + + +++N++N +TVGF+ + +F +++ + Sbjct: 1 MRTLNIAATGMMAQQLNVEVISNNIANLNTVGFKRSRAEFQDLMYQAQVRPGSESSDQDT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q V G T + D AL+G +F + P TR G F Sbjct: 61 IVPAGIQLGLGVKPAAVSRMHGQGPLTPTENDYDVALDGRGYFVITLPNGDTAYTRAGNF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 +++ +G++V+ G ++ + + V + + + + + + Sbjct: 121 QLSPEGTIVTVDGYTVSPNITVPDNTRKVAINRNGEVLAFIDGQTEPENVGQFEVATFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ +++G++E +N N + E+ +I + + Sbjct: 181 EAGLEAMGDNLFRETPASGIPILGIPGQLGYGGIRQGYVEAANVNIVQEITSLISAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + +++ ++ + + Sbjct: 241 EMNSRVVEAGDQMLNTVTQ 259 >gi|110677663|ref|YP_680670.1| flagellar basal body rod protein FlgG [Roseobacter denitrificans OCh 114] gi|109453779|gb|ABG29984.1| flagellar basal-body rod protein FlgG [Roseobacter denitrificans OCh 114] Length = 261 Score = 158 bits (398), Expect = 7e-37, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 97/259 (37%), Gaps = 21/259 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + I A + R+ T+++N+SN T G+ + +F+++ + Sbjct: 1 MRALKIAATGMSAQQMRVETISNNLSNMSTTGYNARRAEFADLHYQQMSRPGTVNATDGT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q V + + GS +TG +LD A+EG + + P TRDG Sbjct: 61 VLPTGVQLGLGVRPSAVSVQLQQGSLSATGGDLDLAIEGTGFLEVTLPSGQTAYTRDGGL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 K +G +V++ G ++ + + V + +++ L Sbjct: 121 KRDAEGLIVTSDGYPVEPEIVIPDDARSISINTSGEVFAYFSDATDAELLGQFNLAGFTN 180 Query: 166 SQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 ++G + + + TV++G+LE S+ +++ E+ ++I + + Sbjct: 181 AKGLEALGGNLFAETEASGAAIVSTPGEDGLGTVRQGYLESSSVDAVREITELIEAQRGY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 +I ++ M + Sbjct: 241 EMNAKVISAADQMMGATTQ 259 >gi|149911700|ref|ZP_01900308.1| Flagellar basal body rod protein FlgG [Moritella sp. PE36] gi|149805230|gb|EDM65247.1| Flagellar basal body rod protein FlgG [Moritella sp. PE36] Length = 262 Score = 158 bits (398), Expect = 7e-37, Method: Composition-based stats. Identities = 42/262 (16%), Positives = 90/262 (34%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + I A + +ST+++N++N TVGF+ + F +++ N + Sbjct: 1 MNPALWISKTGLEAQQANISTISNNLANASTVGFKKERAIFEDLLYQAINQPGGQSSQNT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 S G+ ++T LD + G +F +E P G TR+G+F Sbjct: 61 KLPSGLMVGSGARVVATQKDHSQGNMLTTDNSLDLMVSGRGFFEIEMPDGTTSYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG--EISQKGKVIATMGLYSVD 164 + D+G +V+ YP+ +P + + + + + Sbjct: 121 TLNDEGIIVTPGSGYPLQPQIQIPADAQTITVSEDGEVSVSLPGQTNNQTVGQINISDFV 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + + +G +E SN N E+ +I + Sbjct: 181 NPGGLQPIGQNMYIQTGASGDPVQGLPSNEGLGKLVQGAIETSNVNVTEELVNLIESQRV 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I ++ + + + Sbjct: 241 YEMNSKVISAVDEMLSYINQQL 262 >gi|146305252|ref|YP_001185717.1| flagellar basal-body rod protein FlgG [Pseudomonas mendocina ymp] gi|145573453|gb|ABP82985.1| flagellar basal-body rod protein FlgG [Pseudomonas mendocina ymp] Length = 261 Score = 158 bits (398), Expect = 8e-37, Method: Composition-based stats. Identities = 50/260 (19%), Positives = 98/260 (37%), Gaps = 21/260 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M ++ + A ++ +S VA+N++N +T GF++ +V F ++ AI+ Sbjct: 1 MSSALWVSKTGLAAQDKAMSAVANNLANVNTTGFKSDRVVFEDLFYAIELQPGAQADQVN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q S V GS +TG +D A+ G+ +F +E+P I T G+F Sbjct: 61 TVPSGIQLGSGVRVAGTQKVFTEGSIQTTGQPMDLAIIGNGFFQVEAPNGDIYYTESGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 ++ +G +V+A G V + V + + L + Sbjct: 121 QLNAEGVIVNAQGLPLVPGIEVPAGSSRFTVGSDGIVTAVMAGETLPVELGQITLANFAN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + +K+G LE SN + M MI + + + Sbjct: 181 PGGLEALGGNLYRETVASGEPVEGTPGEDGLGNLKQGVLEGSNVQVVEAMVNMIAIQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRN 240 + ++D M + + Sbjct: 241 EANAKVLDAASG-MQQFLNQ 259 >gi|145298493|ref|YP_001141334.1| flagellar basal body rod protein FlgG [Aeromonas salmonicida subsp. salmonicida A449] gi|142851265|gb|ABO89586.1| flagellar basal body rod protein FlgG [Aeromonas salmonicida subsp. salmonicida A449] Length = 262 Score = 158 bits (398), Expect = 8e-37, Method: Composition-based stats. Identities = 44/261 (16%), Positives = 94/261 (36%), Gaps = 21/261 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + I A + +S ++N++N TVG++ + F +++ N + Sbjct: 1 MNPALWISKTGLDAQQTNISVTSNNLANASTVGYKKSRAIFEDLLYQNINQPGGRSSADT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 + + G+ +T LD + G +F ++ P G TR+G+F Sbjct: 61 ELPSGLMLGAGAKVVATQKNHGQGNVQTTDNSLDLMISGRGYFEIQLPDGSAAYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG--KVIATMGLYSVD 164 + D+G++V+ YP+ +P + ++ G +V+ + L Sbjct: 121 TLNDEGTIVTPGNGYPLQPEIQIPENAQSVTVSTDGQVSIQLKGDGASQVVGQINLSDFV 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 + G + +K+G LE SN N E+ +I + Sbjct: 181 NASGLQPMGENMFLETQSSGAPIGGVAGADGLGVIKQGMLETSNVNVTEELVNLIQAQRV 240 Query: 220 FNSITTLIDENEKSMLEAIRN 240 + + ++ + M I+ Sbjct: 241 YEMNSKVLSAVDGMMSFLIQR 261 >gi|170747255|ref|YP_001753515.1| flagellar basal body rod protein FlgF [Methylobacterium radiotolerans JCM 2831] gi|170653777|gb|ACB22832.1| flagellar basal body rod protein [Methylobacterium radiotolerans JCM 2831] Length = 246 Score = 158 bits (398), Expect = 8e-37, Method: Composition-based stats. Identities = 60/247 (24%), Positives = 117/247 (47%), Gaps = 9/247 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN-----DIDQK 55 MQ + +G+++Q+AL++ L +A+NM+N T GF+ +F E + + + D++ Sbjct: 1 MQNALFVGVSSQMALQRELDVIANNMANVSTTGFKARNTRFEEYLMPVASADSFARPDRR 60 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115 +S+V L G TG L+ A++G A+ A++SP+G TR+G F++ G+LV Sbjct: 61 LSYVIDQGTTLDLGQGPIEQTGNPLNVAVKGSAFIAVQSPQGERYTRNGAFELDAQGTLV 120 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 ++ G V PI I ++ +G G +S + + L + Q + Sbjct: 121 TSDGYKVVG--EGGPISINPQETGLAIGPDGTVSTNLGIRGRIKLVTFANPQRLTNEGAN 178 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 + P ++ LE SN + EM +++ + + + ++++I + Sbjct: 179 LYASPEP--ARAAGIDGRLEPESLERSNVRPVIEMTRLMDVNRSYAMVSSMISRLDDLRG 236 Query: 236 EAIRNIA 242 AIR +A Sbjct: 237 TAIRRLA 243 >gi|126463746|ref|YP_001044860.1| flagellar basal body rod protein FlgG [Rhodobacter sphaeroides ATCC 17029] gi|126105410|gb|ABN78088.1| flagellar basal-body rod protein FlgG [Rhodobacter sphaeroides ATCC 17029] Length = 261 Score = 158 bits (398), Expect = 8e-37, Method: Composition-based stats. Identities = 40/254 (15%), Positives = 91/254 (35%), Gaps = 21/254 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + I A + R+ +++N++N T G+ + F+++ Sbjct: 1 MKALQIAATGMSAQQTRVDVISNNLANMSTTGYNARRADFADLHYQQVVRPGTVSAEDGR 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q V + G+ T +LD A++G + + P G TRDG Sbjct: 61 MLPTGVQLGMGVRPSAVSVVLSQGALAQTRGDLDLAIDGRGYLEVTLPSGQSAYTRDGAL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 K + +G +VS+ G + + V + +++ + L Sbjct: 121 KRSAEGLIVSSDGHEVAPGITIPQDAASISIDATGEVWGYFTGQVQPQLLGQISLTGFTN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 +G ++ P T+++G+LE+S+ +S+ E+ ++I + + Sbjct: 181 EKGLEAIGSNLFLETAASGPPIGGVAGEDGFGTLRQGYLEESSVDSVQEITELIKAQRGY 240 Query: 221 NSITTLIDENEKSM 234 +I ++ + Sbjct: 241 ELNAKVITAADQML 254 >gi|27363703|ref|NP_759231.1| flagellar basal body rod protein FlgG [Vibrio vulnificus CMCP6] gi|37679149|ref|NP_933758.1| flagellar basal body rod protein FlgG [Vibrio vulnificus YJ016] gi|320157107|ref|YP_004189486.1| flagellar basal-body rod protein FlgG [Vibrio vulnificus MO6-24/O] gi|27359819|gb|AAO08758.1| flagellar basal-body rod protein FlgG [Vibrio vulnificus CMCP6] gi|37197891|dbj|BAC93729.1| flagellar basal body rod protein FlgG [Vibrio vulnificus YJ016] gi|319932419|gb|ADV87283.1| flagellar basal-body rod protein FlgG [Vibrio vulnificus MO6-24/O] Length = 262 Score = 158 bits (398), Expect = 8e-37, Method: Composition-based stats. Identities = 45/262 (17%), Positives = 95/262 (36%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + + A + ++T+++N++N T+GF+ + F ++ N + Sbjct: 1 MHPALWVSKTGLDAQQTNIATISNNLANASTIGFKKGRAVFEDLFYQNINQPGGQSSQNT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + G+ +T LD +EGD +F + P I +R+G+F Sbjct: 61 QLPSGLMLGAGSKVVATQKVHTHGNAQTTTNALDLMVEGDGFFQITMPDGNIGYSRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD--EIFNVGEKGEISQKGKVIATMGLYSVD 164 + +G +V++ YP+ +P V + Q +V+ + + Sbjct: 121 TLNGEGVVVTSGSGYPLEPEIVIPEDAISITVGTDGEVSVRIRGQQNNQVVGQITITDFV 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + P ++ V++ LE SN N E+ MI + Sbjct: 181 NPGGLEPIGQNLYLPTGASGDPQEGVPGLDGLGEVRQSMLETSNVNVTEELVNMIEAQRV 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I +K M + + Sbjct: 241 YEMNSKVISSVDKMMSFVNQQL 262 >gi|90418400|ref|ZP_01226312.1| flagellar basal-body rod protein FlgF [Aurantimonas manganoxydans SI85-9A1] gi|90338072|gb|EAS51723.1| flagellar basal-body rod protein FlgF [Aurantimonas manganoxydans SI85-9A1] Length = 241 Score = 158 bits (398), Expect = 8e-37, Method: Composition-based stats. Identities = 79/243 (32%), Positives = 137/243 (56%), Gaps = 4/243 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M+T+ + L+AQLA+ +RL T+A N++N+ T GFR ++KF E++ + +SF + Sbjct: 1 METALPVALSAQLAMSKRLDTIAHNVANSRTTGFRAEEIKFEELISL---SAPEPVSFAS 57 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 G Y S G TG LD A++GDA+FA + P G + TRDGR ++ G + + SG Sbjct: 58 EGTTYFSTRSGEMTQTGNPLDMAVDGDAFFAFQGPNGPVYTRDGRMRINAQGMVETISGY 117 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 P++D+ P+Q+ + G I+Q G +GL+ + R ENSG+ P+ Sbjct: 118 -PLVDVGGAPLQVDPNAGPVTITRDGMITQNGAQAGAVGLFQLPAGAKLTRFENSGLIPD 176 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 P+ + + V V +GF E SN N M E+ ++I L + F + + L+ +E+++ +A++ Sbjct: 177 RAAVPIVEFADVGVIQGFQEGSNVNPMLEISRLISLQRAFENASNLVQSSERTLDDAVKT 236 Query: 241 IAS 243 + + Sbjct: 237 LGT 239 >gi|77464904|ref|YP_354408.1| flagellar basal body rod protein FlgG [Rhodobacter sphaeroides 2.4.1] gi|77389322|gb|ABA80507.1| putative flagellar basal body rod protein [Rhodobacter sphaeroides 2.4.1] Length = 261 Score = 158 bits (398), Expect = 9e-37, Method: Composition-based stats. Identities = 40/254 (15%), Positives = 91/254 (35%), Gaps = 21/254 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + I A + R+ +++N++N T G+ + F+++ Sbjct: 1 MKALQIAATGMSAQQTRVDVISNNLANMSTTGYNARRADFADLHYQQAVRPGTVSAEDGR 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q V + G+ T +LD A++G + + P G TRDG Sbjct: 61 MLPTGVQLGMGVRPSAVSVVLSQGALAQTRGDLDLAIDGRGYLEVTLPSGQSAYTRDGAL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 K + +G +VS+ G + + V + +++ + L Sbjct: 121 KRSAEGLIVSSDGHEVAPGITIPQDAASISIDATGEVWGYFTGQVQPQLLGQISLTGFTN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 +G ++ P T+++G+LE+S+ +S+ E+ ++I + + Sbjct: 181 EKGLEAIGSNLFLETAASGPPIAGVAGEDGFGTLRQGYLEESSVDSVQEITELIKAQRGY 240 Query: 221 NSITTLIDENEKSM 234 +I ++ + Sbjct: 241 ELNAKVITAADQML 254 >gi|56419762|ref|YP_147080.1| flagellar basal body rod protein FlgG [Geobacillus kaustophilus HTA426] gi|56379604|dbj|BAD75512.1| flagellar hook protein [Geobacillus kaustophilus HTA426] Length = 263 Score = 158 bits (398), Expect = 9e-37, Method: Composition-based stats. Identities = 54/261 (20%), Positives = 101/261 (38%), Gaps = 27/261 (10%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID----------- 53 G+ A + +L + +N++N +T GF+ + F +++ + Sbjct: 1 MYSGIGAMRNFQTKLDVIGNNIANVNTYGFKKGRTIFKDLMSQTISGASGPNAGAGRGGT 60 Query: 54 ---QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFKV 108 Q GS +TG LD A+ GD +F S + TR G F + Sbjct: 61 NPKQVGLGSQLAAIDTVHTQGSLQTTGRVLDLAISGDGFFVVGDASGNNRMYTRAGNFYL 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG-----KVIATMGLYSV 163 G +V+A G+Y L + + +QIP + ++G G+++ I T+ L Sbjct: 121 DSQGYIVNADGQYL-LGVGNSRLQIPTDAKSLSIGADGKVTIVDASGTLSTIGTIQLAKF 179 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQ 218 + G + N+ + T+ G LE SN + E +MI + Sbjct: 180 ANNDGLEKAGNNLFRETTNSGTPTTGAPGANGTGTIVSGALEMSNVDLAEEFTEMIVAQR 239 Query: 219 KFNSITTLIDENEKSMLEAIR 239 F + T +I +++ + E + Sbjct: 240 GFQANTRIITTSDEILQELVN 260 >gi|224825779|ref|ZP_03698883.1| flagellar basal-body rod protein FlgG [Lutiella nitroferrum 2002] gi|224602003|gb|EEG08182.1| flagellar basal-body rod protein FlgG [Lutiella nitroferrum 2002] Length = 262 Score = 158 bits (398), Expect = 9e-37, Method: Composition-based stats. Identities = 52/262 (19%), Positives = 94/262 (35%), Gaps = 20/262 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + I A + RL +A+N++N +TVGF+ ++ F ++ ++ Sbjct: 1 MNPALWISKTGIQAQDARLGAIANNLANVNTVGFKRDRMVFEDLFYQVERQPGARVDANN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 Q + GS +TG LD A+ G + ++ G TR G+ Sbjct: 61 ASPSGVQLGNGTRLLGTQKVFTSGSITTTGQALDVAIVGQGFLQVQMSNGETGYTRAGQL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V DG LV+A G V + E V S I + L + Sbjct: 121 QVNSDGQLVNAQGLPIVPAITVPATATSVSIGETGTVSITQSGSTAQTEIGQLTLANFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + ++ + + +K+G LE SN + EM MI + + Sbjct: 181 PTGLLALGDNLFQETTASGTPTVGNPGSDALGKLKQGALEGSNVQVVEEMVDMIAAQRTY 240 Query: 221 NSITTLIDENEKSMLEAIRNIA 242 T ++ + M +++ Sbjct: 241 EMNTKVLSAADNMMQYLAQSVR 262 >gi|221640825|ref|YP_002527087.1| flagellar basal body rod protein FlgG [Rhodobacter sphaeroides KD131] gi|332559802|ref|ZP_08414124.1| FlgG2 [Rhodobacter sphaeroides WS8N] gi|221161606|gb|ACM02586.1| Flagellar basal-body rod protein FlgG precursor [Rhodobacter sphaeroides KD131] gi|332277514|gb|EGJ22829.1| FlgG2 [Rhodobacter sphaeroides WS8N] Length = 261 Score = 158 bits (398), Expect = 9e-37, Method: Composition-based stats. Identities = 40/254 (15%), Positives = 91/254 (35%), Gaps = 21/254 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + I A + R+ +++N++N T G+ + F+++ Sbjct: 1 MKALQIAATGMSAQQTRVDVISNNLANMSTTGYNARRADFADLHYQQVVRPGTVSAEDGR 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q V + G+ T +LD A++G + + P G TRDG Sbjct: 61 MLPTGVQLGMGVRPSAVSVVLSQGALAQTRGDLDLAIDGRGYLEVTLPSGQSAYTRDGAL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 K + +G +VS+ G + + V + +++ + L Sbjct: 121 KRSAEGLIVSSDGHEVAPGITIPQDAASISIDATGEVWGYFTGQVQPQLLGQISLTGFTN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 +G ++ P T+++G+LE+S+ +S+ E+ ++I + + Sbjct: 181 EKGLEAIGSNLFLETAASGPPIAGVAGEDGFGTLRQGYLEESSVDSVQEITELIKAQRGY 240 Query: 221 NSITTLIDENEKSM 234 +I ++ + Sbjct: 241 ELNAKVITAADQML 254 >gi|283850806|ref|ZP_06368092.1| flagellar basal-body rod protein FlgF [Desulfovibrio sp. FW1012B] gi|283573729|gb|EFC21703.1| flagellar basal-body rod protein FlgF [Desulfovibrio sp. FW1012B] Length = 260 Score = 158 bits (398), Expect = 9e-37, Method: Composition-based stats. Identities = 53/258 (20%), Positives = 99/258 (38%), Gaps = 22/258 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF-- 58 M+ S L L+ E RL+ A+N++N +T G++ +V F + +D Sbjct: 1 MEMSMYSALFGALSTETRLNLSANNLANINTTGYKRDRVAFEDTFKRYAHDYHVDPRGDL 60 Query: 59 --------------VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDG 104 + + G+ TG LD A++G +F + + G TR+G Sbjct: 61 REKEIFPRADLIAKPRLAMQTIDFSQGALQLTGNPLDLAIQGPGFFKVSNAGGTYYTRNG 120 Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 F + G LV+ + + + I F+V G + G +A + + +V Sbjct: 121 AFHRSSQGMLVTDQDYPVLGNGGPIQI---PDGRSFSVDATGAVYVDGGQVAQIDVVNVQ 177 Query: 165 MSQGFVRRENSGISPNIPPTPLE---DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221 + + + T E + V +G+LE N + EM MI + F Sbjct: 178 NPDALRKYGANLYTAADGATVQEGPAEGGTTQVAQGYLEKPNVEVVEEMVTMIETQRTFE 237 Query: 222 SITTLIDENEKSMLEAIR 239 + ++ + + +AIR Sbjct: 238 AYQKVMTNSNELDTKAIR 255 >gi|254720629|ref|ZP_05182440.1| flagellar basal body rod protein FlgF [Brucella sp. 83/13] gi|265985673|ref|ZP_06098408.1| flagellar basal body rod protein FlgF [Brucella sp. 83/13] gi|306837353|ref|ZP_07470232.1| flagellar basal body rod protein FlgF [Brucella sp. NF 2653] gi|264664265|gb|EEZ34526.1| flagellar basal body rod protein FlgF [Brucella sp. 83/13] gi|306407545|gb|EFM63745.1| flagellar basal body rod protein FlgF [Brucella sp. NF 2653] Length = 243 Score = 158 bits (398), Expect = 9e-37, Method: Composition-based stats. Identities = 80/242 (33%), Positives = 130/242 (53%), Gaps = 4/242 (1%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 S +GL++ + LE+R+ +A N++N TVGFR KF +V +D +SF + Sbjct: 3 NNSIYVGLSSLITLERRMDAIAHNVANVSTVGFRGEGTKFDTIVSDKASD---DVSFATA 59 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 GK Y+ E G I T LD A++GDAW + +P+G + +RDGR K+ G LVS +G Sbjct: 60 GKSYIRTEAGPLIKTDNPLDVAVKGDAWMSFSTPQGQVYSRDGRMKMLSTGDLVSVTGNA 119 Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 LD+ PI + + G I Q G + +GLY++ SG+ P+ Sbjct: 120 I-LDVGGEPIVLNPGGGAPRISSDGAIYQNGVQVGAIGLYTIPADADLAYAGTSGVIPSK 178 Query: 182 PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 P P+ D + V V +G +E SN ++M EM ++I +++ F + L+ + E ++ EAI+ + Sbjct: 179 PAQPVVDDNSVGVVQGMIEGSNVDAMTEMTRLISISRAFEQVNNLLSQQEATVSEAIKTL 238 Query: 242 AS 243 S Sbjct: 239 GS 240 >gi|319898637|ref|YP_004158730.1| flagellar basal-body rod protein flgG (Distal rod protein) [Bartonella clarridgeiae 73] gi|319402601|emb|CBI76146.1| Flagellar basal-body rod protein flgG (Distal rod protein) [Bartonella clarridgeiae 73] Length = 264 Score = 158 bits (398), Expect = 9e-37, Method: Composition-based stats. Identities = 42/262 (16%), Positives = 92/262 (35%), Gaps = 21/262 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 S +I A + L +A+NM+N +T GF+ + +F++++ + Sbjct: 3 MKSLSIAATGMAAQQTNLDVIANNMANINTTGFKRGRAEFADLMYVADRAVGIPNMLNQA 62 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 V + G+F+ TG LD A+ G+ WF ++ P + TR G F Sbjct: 63 IIPEGAMIGMGVRTAAVRTVNTQGAFVQTGNALDLAINGNGWFEIQDPNGNVFYTRSGAF 122 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-IATMGLYSVDM 165 +++ G +++ G + + V + L + Sbjct: 123 NLSETGQIITLDGNLVQPVITIPIGSKNVTVSPDGTVYYQTDADPSAVEAGRLRLVNFVN 182 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ ++ + LE SN + + EM ++I + + Sbjct: 183 EVGLEPIGDNLFRETQASGAPVPGDPKDDGYGSIMQAMLESSNVDPVKEMTELIAAQRSY 242 Query: 221 NSITTLIDENEKSMLEAIRNIA 242 + +I +++ +N+ Sbjct: 243 EMNSKVIQASDEMAAVISKNLR 264 >gi|302338303|ref|YP_003803509.1| flagellar basal-body rod protein FlgF [Spirochaeta smaragdinae DSM 11293] gi|301635488|gb|ADK80915.1| flagellar basal-body rod protein FlgF [Spirochaeta smaragdinae DSM 11293] Length = 282 Score = 158 bits (398), Expect = 9e-37, Method: Composition-based stats. Identities = 52/278 (18%), Positives = 103/278 (37%), Gaps = 38/278 (13%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKND------ 51 M G + + R+ +++N++N D VG++ + F +++ ND Sbjct: 1 MVRGIYTGASGMVDQMHRMDAISNNLANVDLVGYKRDQSVSKAFPQMLIRRMNDDGVYSF 60 Query: 52 ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101 + + V + + G+ TG + D AL+G +FA+++PRG T Sbjct: 61 PFGSADTAPVVGMIGTGVEYNESFTVFSQGALKETGNDFDLALDGKGFFAVDTPRGERYT 120 Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV------- 154 R+G F +T +G L + G+ + + + I+ S G Sbjct: 121 RNGTFVLTKEGILTTKEGEPVLGENGIIRIKKNNFVVDERGQVWQNGSYDGDPQRLVSKE 180 Query: 155 ---------IATMGLYSVDMSQGFVRRENSGISPNIPPTPLED---LSGVTVKRGFLEDS 202 + T+ + + + +S S V +GFLE S Sbjct: 181 ENEWENLELVDTLKVVDFRRDRYLKKEGDSLYIAPEEAGASNQVALGSETKVVQGFLEGS 240 Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 N NS+ EM +MI + + + + + ++ I + Sbjct: 241 NVNSVTEMVRMIEVNRAYEANQKAMQTHDALTGRLIND 278 >gi|298529927|ref|ZP_07017329.1| fagellar hook-basal body protein [Desulfonatronospira thiodismutans ASO3-1] gi|298509301|gb|EFI33205.1| fagellar hook-basal body protein [Desulfonatronospira thiodismutans ASO3-1] Length = 261 Score = 158 bits (398), Expect = 9e-37, Method: Composition-based stats. Identities = 52/261 (19%), Positives = 110/261 (42%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 MQ ++ E +++T+ +N++N +T G++ K+ F +V +D + Sbjct: 1 MQDEMYSAFFGAMSQEAKMNTITNNLANVNTTGYKRDKIAFEDVFTRYASDYGDPNMTLE 60 Query: 61 SGKEYLSK---------------EVGSFISTGTELDFALEGDAWFALESPR-GIILTRDG 104 + + G TG LD A+ G+ +F + +P TR+G Sbjct: 61 DRLPWPESKLRSQTRPSPVHLDLQDGDMRKTGNPLDLAISGEGFFEVTTPEGETAYTRNG 120 Query: 105 RFKVTDD-GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 F + G LV+ G+ L PI+IP+ +GE GE+ G ++ + L + Sbjct: 121 SFLRNPETGHLVT--GQNFELQGEGGPIEIPEDASNIAIGENGEVLADGDLLDVINLTTF 178 Query: 164 DMSQGFVRRENSGISP-NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222 ++ + + + +++G+LE+SN + +YEM MI + F + Sbjct: 179 TDLNALEKKGRQLVQVKDGADSAPIPAEDARIEQGYLENSNVDPVYEMVNMISTMRNFEA 238 Query: 223 ITTLIDENEKSMLEAIRNIAS 243 + ++ + + + I+ + + Sbjct: 239 LQKMMTSSHEKDQQLIQQVGT 259 >gi|260437440|ref|ZP_05791256.1| flagellar basal-body rod protein FlgG [Butyrivibrio crossotus DSM 2876] gi|292810072|gb|EFF69277.1| flagellar basal-body rod protein FlgG [Butyrivibrio crossotus DSM 2876] Length = 256 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 53/256 (20%), Positives = 99/256 (38%), Gaps = 21/256 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKND------ 51 M + G + +RL V++N++N+ T ++ F +++ ND Sbjct: 1 MVRALYTGATGMVNEMKRLDVVSNNLANSATTAYKKEGATSQAFKDMLAIKINDETDSYI 60 Query: 52 ---IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-----IILTRD 103 I V G+ Y G+ TG D AL G+ +FA+ + TRD Sbjct: 61 DRPIGYMSLGVKIGETYTDYSTGNLRETGNTYDLALSGNGFFAISYADKNGTESVRYTRD 120 Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 G F V +G L++ G + + D + ++ E G I G+ +A + + Sbjct: 121 GSFTVNSEGILMTKDGDFVLGDDGGLITI--PVGTEVSINESGIIEADGEEVARLQITDF 178 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223 + + + + V +G+LE SN N + EM MI + + + S Sbjct: 179 EDYDYLKKFGENMY--TAIDGATTKAAQGKVYQGYLESSNVNVVSEMVNMITIARDYESS 236 Query: 224 TTLIDENEKSMLEAIR 239 +I + ++ A+ Sbjct: 237 QKVIQSIDSTLERAVN 252 >gi|218135323|ref|ZP_03464127.1| hypothetical protein BACPEC_03228 [Bacteroides pectinophilus ATCC 43243] gi|217990708|gb|EEC56719.1| hypothetical protein BACPEC_03228 [Bacteroides pectinophilus ATCC 43243] Length = 256 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 59/256 (23%), Positives = 103/256 (40%), Gaps = 21/256 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVV---------GAI 48 M + + RL V++N++N T ++ + F EV+ G + Sbjct: 1 MVKGLYTAYTGLVNQQNRLDVVSNNLANAATTAYKKEGLTSQSFDEVMAYKVKDASVGTV 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-----PRGIILTRD 103 I V G+ Y GSF TG D AL GD +F++ + TRD Sbjct: 61 NQYIGDLNLGVKIGESYRDYSQGSFRETGENFDLALSGDGFFSISFTNKAGETSTMYTRD 120 Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 G F +T DG LV+ G + + PIQ+P + G I+ G I + + Sbjct: 121 GNFSMTKDGYLVTKDGDFVLG--EGGPIQLPTDAAKIAIDRDGTITADGVQIDKLAITDF 178 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223 + + + T + V +G+LE SN N + EM +MI +++ F + Sbjct: 179 EDYNYLEQYGENLYR--ALDTATTKDAAGQVYQGYLEQSNVNVVSEMVEMITISRAFEAN 236 Query: 224 TTLIDENEKSMLEAIR 239 ++ + ++ +A+ Sbjct: 237 QKAMNAADDTLKKAVT 252 >gi|83858805|ref|ZP_00952327.1| flagellar basal-body rod protein FlgF [Oceanicaulis alexandrii HTCC2633] gi|83853628|gb|EAP91480.1| flagellar basal-body rod protein FlgF [Oceanicaulis alexandrii HTCC2633] Length = 244 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 68/244 (27%), Positives = 113/244 (46%), Gaps = 4/244 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS--EVVGAIKNDIDQKISF 58 M + IGL QL L +++ VA+N++N +T GF+ ++ + A D + F Sbjct: 1 MDNTMLIGLTRQLTLRRQMDVVANNIANANTQGFKAERMMLEPDTSMRARHQDGPNRARF 60 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSAS 118 V G+ T LD AL+GD +F LE+ G TRDG F ++ G LV+ Sbjct: 61 VDEWAMGRDFSQGALTHTSRPLDLALQGDGFFMLETDAGERFTRDGAFTLSPQGELVAGD 120 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178 G LD PI + ++GE G ++Q G+ IA +G+ QG + + Sbjct: 121 GARV-LDAGGAPIILDPAAGQISIGETGIVTQNGQQIAQVGVVRFAD-QGVLNKTGDNRY 178 Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 VK+GFLE SN M E+ M+ +++ + S++ +I + ++ +AI Sbjct: 179 VAPEDAERVIEDLPQVKQGFLESSNVRPMLEITSMMEVSRAYASVSRMIKDTDELSRKAI 238 Query: 239 RNIA 242 + Sbjct: 239 DRLG 242 >gi|328543156|ref|YP_004303265.1| flagellar basal-body rod FlgG [polymorphum gilvum SL003B-26A1] gi|326412902|gb|ADZ69965.1| Flagellar basal-body rod FlgG [Polymorphum gilvum SL003B-26A1] Length = 259 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 39/258 (15%), Positives = 90/258 (34%), Gaps = 21/258 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + +I A E + +++N++N T G++ + F +++ + Sbjct: 1 MKALHIAATGMKAQELNVEVISNNVANMRTTGYKRQRADFQDLLYQNLRRMGTDSSNAGT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q S V + G+ TG ++D A+ G+ +F ++ P TRDG F Sbjct: 61 IVPTGVQIGSGVKTAATARIMTQGTIEQTGKDMDVAIRGEGFFQIQLPDGTTAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 + +G+LV+ G +P N + + + + L Sbjct: 121 ERDANGTLVTIDGYTLD-PGIVIPNDARDLTISANGTVQAVVGVATQQFGQIQLARFVNK 179 Query: 167 QGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221 G ++ + +++ +LE SN +++ E+ +I + + Sbjct: 180 SGLEAIGDNLYLETEASGQPQVGIPGEEGYGDLQQSYLEMSNVDAVSEISDLIAAQRAYE 239 Query: 222 SITTLIDENEKSMLEAIR 239 + +I ++ Sbjct: 240 MNSRIIQAADEMYSTTTN 257 >gi|323204838|gb|EFZ89832.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] Length = 255 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 41/259 (15%), Positives = 85/259 (32%), Gaps = 25/259 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M A + + +A+N++N T GF+ + F +++ Sbjct: 1 MDR-----KTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 55 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V G+ T D A++G +F + P G TRDG F Sbjct: 56 TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGTSAYTRDGSF 115 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V +G LV+A G + + V + + + L + Sbjct: 116 QVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMN 175 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + + +G++E SN N E+ MI + + + Sbjct: 176 DTGLESIGENLYIETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY 235 Query: 221 NSITTLIDENEKSMLEAIR 239 + + ++ + + + Sbjct: 236 EINSKAVSTTDQMLQKLTQ 254 >gi|56460250|ref|YP_155531.1| flagellar basal body rod protein FlgG [Idiomarina loihiensis L2TR] gi|56179260|gb|AAV81982.1| Flagella basal body rod protein [Idiomarina loihiensis L2TR] Length = 262 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 40/262 (15%), Positives = 91/262 (34%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + I A ++ +S +++N++N+ T+GF+ + F +++ N + Sbjct: 1 MNPALWISKTGLDAQQRDISVISNNLANSSTIGFKKSRAVFEDLLYQNINQPGGQSAQDT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + S G+ +T LD ++G +F + P I TR+G+F Sbjct: 61 ELPNGLMLGAGTKVVATQKSHTQGNVQTTDNSLDVMIDGKGFFQVLMPDGNISYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEIS--QKGKVIATMGLYSVD 164 + ++G +V++ Y + +P V+ + L + Sbjct: 121 SLNEEGEIVTSGNGYTIEPAIQIPEDAMSVSISQEGEVTVTQPGNPDNVVVGQINLVNFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + + +G LE SN N E+ +I + Sbjct: 181 NPAGLQPMGQNLYKETAVSGAPLEAVPGVDGMGNTIQGALETSNVNVTEELVNLIESQRG 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I ++ + + + Sbjct: 241 YEMNSKVISSVDQMLSYINQQL 262 >gi|294013088|ref|YP_003546548.1| flagellar basal-body rod protein FlgG [Sphingobium japonicum UT26S] gi|292676418|dbj|BAI97936.1| flagellar basal-body rod protein FlgG [Sphingobium japonicum UT26S] Length = 262 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 45/258 (17%), Positives = 90/258 (34%), Gaps = 20/258 (7%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK-------- 55 + ++ A ++ +A+N++N +T GF+ + F + Sbjct: 5 ALHVARTGLDAQNTKMRVIANNLANVNTTGFKRDRADFETLAYQQIVAAGANSDSENKFA 64 Query: 56 -----ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVT 109 S VA G+ TG LD A+EG +F ++ P I TR G F T Sbjct: 65 TGLNLGSGVALQGTSKINAQGTLNQTGNTLDMAIEGSGYFQVQQPDGSIAYTRAGNFTTT 124 Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDMSQG 168 +G +V++ G + + + + + + L S G Sbjct: 125 AEGVVVTSDGLPLIPQITVPEGATSVTIGNDGTVSATLQGQTEPTQLGQIELASFMNPGG 184 Query: 169 FVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223 + + + + V+ G+LE SN N + E+ MI + + Sbjct: 185 LTSVGGNLLKESAASGTPQVGVAGLDGRGVVRAGYLETSNVNVVEELVDMIETQRAYEVN 244 Query: 224 TTLIDENEKSMLEAIRNI 241 + +I ++ + A + + Sbjct: 245 SKMIKATDEMLQYANQQL 262 >gi|316932824|ref|YP_004107806.1| flagellar basal-body rod protein FlgF [Rhodopseudomonas palustris DX-1] gi|315600538|gb|ADU43073.1| flagellar basal-body rod protein FlgF [Rhodopseudomonas palustris DX-1] Length = 253 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 62/251 (24%), Positives = 123/251 (49%), Gaps = 11/251 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND-----IDQK 55 M+ + +GL+ Q+ LE+++ VA+N++N T GF+ + F E + ++ D++ Sbjct: 1 MENALLVGLSRQVVLERQMDVVANNLANISTNGFKAERSMFQEFLNTGAHEDNFPRPDRR 60 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115 +SFV Y GS T LD A++G + +++P+G TRDG K+ G LV Sbjct: 61 VSFVQDRATYHDLSTGSLQQTKNPLDIAIDGPGFLVVQTPQGERFTRDGSLKINAQGQLV 120 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI----ATMGLYSVDMSQGFVR 171 ++SG + + IQ K+ + + + + +I + + S D Q ++ Sbjct: 121 NSSGFPVLGTGGPIVIQPTDKELSISPDGRVSVLEGTSIIDSLRGKLRVVSFDRPQTLMK 180 Query: 172 RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 + + +P + S +++G++E SN NS+ EM +MI +T+ + I+ ++ + Sbjct: 181 QGGNLFAPTSDQGTPDIKSM--LRQGYVEKSNVNSVLEMTRMIDVTRTYTQISAMLQQQS 238 Query: 232 KSMLEAIRNIA 242 + AI + Sbjct: 239 ELRKAAIEKLG 249 >gi|256014918|ref|YP_003104927.1| flagellar basal-body rod protein FlgF [Brucella microti CCM 4915] gi|255997578|gb|ACU49265.1| flagellar basal-body rod protein FlgF [Brucella microti CCM 4915] Length = 243 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 80/242 (33%), Positives = 130/242 (53%), Gaps = 4/242 (1%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 S +GL++ + LE+R+ +A N++N TVGFR KF +V +D +SF + Sbjct: 3 NNSIYVGLSSLITLERRMDAIAHNVANVSTVGFRGEGTKFDTIVSDKASD---DVSFATA 59 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 GK Y+ E G I T LD A++GDAW + +P+G + +RDGR K+ G LVS +G Sbjct: 60 GKSYIRTEAGPLIKTDNPLDVAVKGDAWMSFSTPQGQVYSRDGRMKMLSTGDLVSVTGNA 119 Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 LD+ PI + + G I Q G + +GLY++ SG+ P+ Sbjct: 120 I-LDVGGAPIVLNPGGGAPRISSDGAIYQNGVQVGAIGLYTIPADADLAYAGTSGVIPSK 178 Query: 182 PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 P P+ D + V V +G +E SN ++M EM ++I +++ F + L+ + E ++ EAI+ + Sbjct: 179 PAQPVVDDNSVGVVQGMIEGSNVDAMTEMTRLISISRAFEQVNNLLSQQEATVSEAIKTL 238 Query: 242 AS 243 S Sbjct: 239 GS 240 >gi|56421867|ref|YP_149185.1| flagellar basal-body rod protein [Geobacillus kaustophilus HTA426] gi|56381709|dbj|BAD77617.1| flagellar basal-body rod protein [Geobacillus kaustophilus HTA426] Length = 276 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 58/276 (21%), Positives = 106/276 (38%), Gaps = 37/276 (13%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51 M + LA E+R+ + +N++N +T G++ F E++ + D Sbjct: 1 MLRGLYTAASGMLAQERRVDWLTNNLANAETPGYKADAAAMRAFPELLMSRLEDQPIPTA 60 Query: 52 ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFAL-------------EGDA 88 I ++ V + + G TG D AL G Sbjct: 61 SRRAIPTQTVIGPLVTGVYMQELIPNFRQGDVKETGLATDIALVDGQVPVDRASGQRGAL 120 Query: 89 WFALESPRGI-ILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGE 147 +FA+ + +G TR+G F ++ DG L + G Y + + +IP E F V + G Sbjct: 121 FFAVANGQGEVRYTRNGHFTLSPDGYLTTQEGWYVL---DANGERIPLSSERFAVRDDGT 177 Query: 148 ISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-TVKRGFLEDSNANS 206 I + +G+ Q V+ N P P + TVK+ FLE SN + Sbjct: 178 IIDENGTATRLGVAFAANPQTLVKEGNGLFRSTTGPLPQAPGNVTYTVKQRFLERSNVDI 237 Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 M ++ + F + ++ ++S+ +A+ + Sbjct: 238 ERTMTDLLAAYRAFEANQKIVQAYDRSLDKAVNEVG 273 >gi|84502379|ref|ZP_01000515.1| flagellar basal body rod protein FlgG [Oceanicola batsensis HTCC2597] gi|84389191|gb|EAQ01988.1| flagellar basal body rod protein FlgG [Oceanicola batsensis HTCC2597] Length = 261 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 42/262 (16%), Positives = 90/262 (34%), Gaps = 22/262 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55 + I +A + + +++N++N T GF++ + F +++ Sbjct: 1 MKALGIAATGMMAQQTNVDVISNNIANASTTGFKSARASFQDLLYENIEREGAPTSDQGT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 V + G T + D A+EG +F + P G TRDG Sbjct: 61 YLPVGIDVGLGVRTAGTVRLNTQGGLTQTENQTDLAIEGRGYFVVNMPDGNAAYTRDGSL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 ++ +G +V+ G + + E V I + L + Sbjct: 121 RLNAEGQIVTQQGYEVNPGIVVPQDTTRVEIGETGIVSAYVGNDAIPVEIGQLTLATFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 G N+ ++ + + +++G+LE SN N + ++ +I + + Sbjct: 181 DAGMRPLGNNLLAATVASGDPTQANPGDPAVGILRQGYLETSNVNIIQQITDLISAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNIA 242 + I+ ++ M A I Sbjct: 241 EMNSKSIETADQMMSTA-NQIR 261 >gi|114762164|ref|ZP_01441632.1| flagellar basal-body rod protein FlgG [Pelagibaca bermudensis HTCC2601] gi|114545188|gb|EAU48191.1| flagellar basal-body rod protein FlgG [Roseovarius sp. HTCC2601] Length = 261 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 41/259 (15%), Positives = 94/259 (36%), Gaps = 21/259 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + I A + R+ +++N+SN T G+ + +F+++ Sbjct: 1 MRALKIAATGMSAQQMRVEVISNNLSNMSTTGYNARRAEFADLHYQQVARAGTVSAADGT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 Q + G+ TG +LD A+EG +F + P + TRDG Sbjct: 61 MLPTGVQLGLGARPAAVTMKLAQGALSQTGGDLDLAIEGRGYFEVTLPSDLAGYTRDGAL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 K +G +V++ G ++ + + + +++ + L Sbjct: 121 KRDGEGLIVTSDGLPVAPEIVIPDDATSLSINAEGEIYAYFNDAVEAQLLGQLTLVGFTN 180 Query: 166 SQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 +G + + P T + G+LEDS+ + +YE+ ++I + + Sbjct: 181 PKGLEAIGGNLFTETEASGPPIQTTAGQDGLGTFRHGYLEDSSVDPVYEITELIEAQRGY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + +I ++ + ++ Sbjct: 241 ELNSKVISAADQMLGATVQ 259 >gi|117619599|ref|YP_857341.1| flagellar basal body rod protein FlgG [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117561006|gb|ABK37954.1| flagellar basal-body rod protein FlgG [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 262 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 93/261 (35%), Gaps = 21/261 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + I A + +S ++N++N TVG++ + F +++ N + Sbjct: 1 MNPALWISKTGLDAQQTNISVTSNNLANASTVGYKKSRAIFEDLLYQNINQPGGRSSADT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 + + G+ +T LD + G +F ++ P G TR+G+F Sbjct: 61 ERPSGLMLGAGAKVVATQKNHSQGNVQTTDNSLDLMISGRGYFEIQLPDGSAAYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG--KVIATMGLYSVD 164 + +G++V+ YP+ +P + ++ G +V+ + Sbjct: 121 TLNSEGTIVTPGNGYPLQPEIQIPENAQSVTIGEDGQVSVQLKGDGASQVVGQINTTDFV 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQK 219 + G + T +K+G LE SN N E+ +I + Sbjct: 181 NASGLQPMGENMFVETQSSGAPVQGVAGTDGLGVIKQGMLETSNVNVTEELVNLIQAQRV 240 Query: 220 FNSITTLIDENEKSMLEAIRN 240 + + ++ + M I+ Sbjct: 241 YEMNSKVLSAVDGMMSFLIQR 261 >gi|146295640|ref|YP_001179411.1| flagellar basal body rod protein [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145409216|gb|ABP66220.1| flagellar basal body rod protein [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 257 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 49/260 (18%), Positives = 96/260 (36%), Gaps = 23/260 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVG---------AI 48 M + + ++ + A+N++N T GF+ F ++ +I Sbjct: 1 MIRGIYTSASGMILNQKLMDLTANNIANVSTTGFKRDIAQVESFRRMMTHKIYDDSSNSI 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF------ALESPRGIILTR 102 N I + G +I T L+ A+ G +F + TR Sbjct: 61 DNAIGYMSLGADVSRIVSDFSQGLYIKTDEPLNLAIRGSGFFAVEKVDPQTGQAQVYYTR 120 Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162 +G F + +G LV+ G + + Q + E+G I Q G+ + + L Sbjct: 121 NGAFTLNSNGELVTLEGFRVLG---QNGRIVLQNQGQIRIDEQGNIYQDGRFVDRLRLVD 177 Query: 163 VDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222 + N+ + + V +G+LE SN NS+ EM MI++ + + + Sbjct: 178 FQDKTLLRKIGNNLFEADAQS--QQIAFSGRVLQGYLEGSNVNSVQEMVNMINVLRAYEA 235 Query: 223 ITTLIDENEKSMLEAIRNIA 242 ++++ +A+ IA Sbjct: 236 NQKAFIAQDETLQKAVNEIA 255 >gi|62317080|ref|YP_222933.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 1 str. 9-941] gi|83269073|ref|YP_418364.1| flagellar basal body rod protein FlgF [Brucella melitensis biovar Abortus 2308] gi|189022347|ref|YP_001932088.1| flagellar basal body rod protein FlgF [Brucella abortus S19] gi|225685989|ref|YP_002733961.1| flagellar basal body rod protein FlgF [Brucella melitensis ATCC 23457] gi|237816642|ref|ZP_04595634.1| flagellar basal body rod protein FlgF [Brucella abortus str. 2308 A] gi|254691431|ref|ZP_05154685.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 6 str. 870] gi|254695270|ref|ZP_05157098.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 3 str. Tulya] gi|254698369|ref|ZP_05160197.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 2 str. 86/8/59] gi|254731814|ref|ZP_05190392.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 4 str. 292] gi|256256617|ref|ZP_05462153.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 9 str. C68] gi|256262885|ref|ZP_05465417.1| flagellar basal body rod protein [Brucella melitensis bv. 2 str. 63/9] gi|260544321|ref|ZP_05820142.1| flagellar basal body rod protein [Brucella abortus NCTC 8038] gi|260757049|ref|ZP_05869397.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 6 str. 870] gi|260759580|ref|ZP_05871928.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 4 str. 292] gi|260762824|ref|ZP_05875156.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 2 str. 86/8/59] gi|260882859|ref|ZP_05894473.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 9 str. C68] gi|261215636|ref|ZP_05929917.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 3 str. Tulya] gi|297249974|ref|ZP_06933675.1| flagellar basal-body rod protein FlgF [Brucella abortus bv. 5 str. B3196] gi|62197273|gb|AAX75572.1| FlgF, flagellar basal-body rod protein FlgF [Brucella abortus bv. 1 str. 9-941] gi|82939347|emb|CAJ12294.1| Flagellar basal body rod protein [Brucella melitensis biovar Abortus 2308] gi|189020921|gb|ACD73642.1| Flagellar basal body rod protein [Brucella abortus S19] gi|225642094|gb|ACO02007.1| flagellar basal body rod protein [Brucella melitensis ATCC 23457] gi|237787455|gb|EEP61671.1| flagellar basal body rod protein FlgF [Brucella abortus str. 2308 A] gi|260097592|gb|EEW81466.1| flagellar basal body rod protein [Brucella abortus NCTC 8038] gi|260669898|gb|EEX56838.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 4 str. 292] gi|260673245|gb|EEX60066.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 2 str. 86/8/59] gi|260677157|gb|EEX63978.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 6 str. 870] gi|260872387|gb|EEX79456.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 9 str. C68] gi|260917243|gb|EEX84104.1| flagellar basal body rod protein FlgF [Brucella abortus bv. 3 str. Tulya] gi|263092722|gb|EEZ16931.1| flagellar basal body rod protein [Brucella melitensis bv. 2 str. 63/9] gi|297173843|gb|EFH33207.1| flagellar basal-body rod protein FlgF [Brucella abortus bv. 5 str. B3196] gi|326410315|gb|ADZ67379.1| flagellar basal body rod protein FlgF [Brucella melitensis M28] gi|326553608|gb|ADZ88247.1| flagellar basal body rod protein FlgF [Brucella melitensis M5-90] Length = 243 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 79/242 (32%), Positives = 129/242 (53%), Gaps = 4/242 (1%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 S +GL++ + LE+R+ +A N++N TVGFR KF +V +D +SF + Sbjct: 3 NNSIYVGLSSLITLERRMDAIAHNVANASTVGFRGEGTKFDTIVSDKASD---DVSFATA 59 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 GK Y+ E G I T LD A++GDAW + +P+G + +RDGR K+ G VS +G Sbjct: 60 GKSYIRTEAGPLIKTDNPLDVAVKGDAWMSFSTPQGQVYSRDGRMKMLSTGDPVSVTGNA 119 Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 LD+ PI + + G I Q G + +GLY++ SG+ P+ Sbjct: 120 I-LDVGGAPIVLNPGGGAPRISSDGAIYQNGVQVGAIGLYTIPADADLAYAGTSGVIPSK 178 Query: 182 PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 P P+ D + V V +G +E SN ++M EM ++I +++ F + L+ + E ++ EAI+ + Sbjct: 179 PAQPVVDDNSVGVVQGMIEGSNVDAMTEMTRLISISRAFEQVNNLLSQQEATVSEAIKTL 238 Query: 242 AS 243 S Sbjct: 239 GS 240 >gi|182680548|ref|YP_001834694.1| flagellar basal body rod protein FlgG [Beijerinckia indica subsp. indica ATCC 9039] gi|182636431|gb|ACB97205.1| flagellar basal-body rod protein FlgG [Beijerinckia indica subsp. indica ATCC 9039] Length = 262 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 44/262 (16%), Positives = 92/262 (35%), Gaps = 21/262 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----------- 50 + +I A + + +A+N++N +T F+ + +F++++ + Sbjct: 1 MKALSIAATGMAAQDLNVQVIANNIANMNTTAFKRARAEFTDLLYQAERLQGVANRGQSN 60 Query: 51 ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + Q V + G+ +TG +LD AL G WF + SP + TR G F Sbjct: 61 MIPEGAQLGLGVRTAAIRNLHVQGTLTNTGNKLDLALNGRGWFQVTSPEGETLYTRAGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQKGKVIATMGLYSVDM 165 G LV+ G ++ V + I + L + Sbjct: 121 STNATGQLVTTDGYLVNPNITIPTDATDVAVNQSGVVSVTRNGQTSAQQIGQLTLTNFAN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ + T+ +G+LE SN + + E+ +I + + Sbjct: 181 EAGLTPLGSNLYRQTEASGTPVSGTPGDIGFATINQGYLETSNVDPVKEITDLISAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNIA 242 + +I ++ +N+ Sbjct: 241 EMNSKVIQAADEMATTISKNMG 262 >gi|160878402|ref|YP_001557370.1| hypothetical protein Cphy_0244 [Clostridium phytofermentans ISDg] gi|160427068|gb|ABX40631.1| protein of unknown function DUF1078 domain protein [Clostridium phytofermentans ISDg] Length = 271 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 48/271 (17%), Positives = 99/271 (36%), Gaps = 30/271 (11%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--------- 51 M + G + ++ + L T+++N+SN +T G++ +FS ++ + Sbjct: 1 MMRALWTGASGMISQQTSLDTISNNLSNINTAGYKKENAQFSSLLYSKIQSKVTDSEGKV 60 Query: 52 ---IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFK 107 I Q S V S G+ + + D A+ G+ F++ TR+G F Sbjct: 61 KPVIGQVGSGVRVTGIVSSFTQGTLQESNNDWDLAISGNGLFSVRDSDGNTAYTRNGSFH 120 Query: 108 --VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA--------T 157 + +G ++++ YPVL+ P+ +I V + Sbjct: 121 IAIGAEGVTLASADGYPVLNTKGQPVVFNNNWDISKVTMDEYGNLMYPDANNIAQRTGIQ 180 Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPL------EDLSGVTVKRGFLEDSNANSMYEMG 211 +GL G + S +L + G+LE SN + E+ Sbjct: 181 IGLTQFVNPAGLEKAGGSLFYETESSGAPLKEVENNNLKQSKIHTGYLEASNVQTADEIV 240 Query: 212 QMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 +I + + + +I ++ + +A N+ Sbjct: 241 NLIVTQRAYEMNSKVITAADEMLQQA-NNLR 270 >gi|197104381|ref|YP_002129758.1| flagellar basal-body rod protein FlgG [Phenylobacterium zucineum HLK1] gi|196477801|gb|ACG77329.1| flagellar basal-body rod protein FlgG [Phenylobacterium zucineum HLK1] Length = 262 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 40/263 (15%), Positives = 91/263 (34%), Gaps = 22/263 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + A + + +++N++N +TV F+ + +F +++ Sbjct: 1 MQALRTAATGMAAQQLNVEVISNNIANMNTVAFKRQRAEFQDLLYQTFEAAGVQSSDQGT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V +G Y G+ T +LD A++G +F + P TR G Sbjct: 61 IVPTGVQVGAGVKAGSVYRIATQGTLTRTENKLDMAIDGRGFFQVLLPSGETAYTRAGNL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 V D G LV+ G + + + V ++ + L + Sbjct: 121 SVNDQGQLVTQDGYPIEPGITIPQDAVDVAISKSGQVQVTQAGQTAPTIVGQLELATFLN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + ++ P + + +G+ E SN +++ E+ +I + + Sbjct: 181 EGGLQAQGSNLFKETAASGPPTNGIPGENGVGELIQGYTEASNVDAVAEITALIVAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNIAS 243 + +I + + A + + Sbjct: 241 EMNSKVISTADNMLATA-NQVKA 262 >gi|83646788|ref|YP_435223.1| flagellar basal body rod protein [Hahella chejuensis KCTC 2396] gi|83634831|gb|ABC30798.1| Flagellar basal body rod protein [Hahella chejuensis KCTC 2396] Length = 254 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 45/255 (17%), Positives = 99/255 (38%), Gaps = 15/255 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-------KNDID 53 M + + A ++++ T+++NM+N +TV ++ +V F ++V I Sbjct: 1 MIDALYVAETGLQAGQKQIETISNNMANLNTVAYKKSRVAFGDLVSRQPAASAAEGKGIG 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDG 112 + + + G +T +LD A+ GD +F + G TR+G K+ +DG Sbjct: 61 SVGMGTKVAEVSMQFDSGDLKATENQLDLAIRGDGFFEVLLENGEYGYTRNGALKIDEDG 120 Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172 L + +G D +P + + K I + + + L Q Sbjct: 121 YLSTLTGLRLS-DQIQIPPDASKMQISTDGVVKVLIGEDVLEVGEIQLAKFVNDQALESA 179 Query: 173 ENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 P +++GFLE SN + + E+ +++ + + + + +I Sbjct: 180 GQGLYIPADDAGAPLYSQAGVNGLGMIQQGFLESSNVDLVKELVELVTAQRGYQANSHVI 239 Query: 228 DENEKSMLEAIRNIA 242 ++ M + ++ Sbjct: 240 RAADEIM-QITNDLR 253 >gi|126738578|ref|ZP_01754283.1| flagellar basal-body rod protein FlgG [Roseobacter sp. SK209-2-6] gi|126720377|gb|EBA17083.1| flagellar basal-body rod protein FlgG [Roseobacter sp. SK209-2-6] Length = 261 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 41/259 (15%), Positives = 97/259 (37%), Gaps = 21/259 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + I A + R+ T+++N++N +T + + +F+++ + Sbjct: 1 MRALKIAATGMSAQQLRVETISNNLANMNTTAYNARRAEFADLHYQQVSRAGTINASDGT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q V + G+ T ++LD A+EG + + P G TRDG Sbjct: 61 VLPTGVQVGLGVRPAAISVHLNQGALKQTNSDLDVAIEGKGYLEVTLPSGQSAYTRDGAL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 K + +G +V++ G ++ + V + S G+++ L Sbjct: 121 KRSAEGLIVTSDGYPVSPEITIPNDALSISINPEGEVYAYFDESTAGQLLGQFNLAGFTN 180 Query: 166 SQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 +G ++ + ++++G+LE S+ +S+ E+ ++I + + Sbjct: 181 PKGLEALGSNLFIATEASGAANTSTAGEDGLGSLRQGYLEGSSVDSVREVTELIEAQRGY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 +I ++ M + Sbjct: 241 EMNAKVISAVDQMMGATTQ 259 >gi|319405401|emb|CBI79020.1| Flagellar basal-body rod protein flgG [Bartonella sp. AR 15-3] Length = 264 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 42/262 (16%), Positives = 92/262 (35%), Gaps = 21/262 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55 S +I A + L +A+NM+N +T GF+ + +F++++ + Sbjct: 3 MKSLSIAATGMAAQQTNLDVIANNMANINTTGFKRGRAEFADLMYVADRAVGVPNMLNQA 62 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 V + G+F+ TG LD A+ G+ WF ++ P + TR G F Sbjct: 63 IIPEGAMIGMGVRTAAVRTVNTQGAFVQTGNALDLAINGNGWFEIQDPNGNVFYTRSGAF 122 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-IATMGLYSVDM 165 +++ G +++ G + + V + L + Sbjct: 123 NLSETGQIITLDGNLVQPVVTIPIGSKNITVSSDGTIYYQTDTDPNAVEAGRLRLVNFVN 182 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ ++ + LE SN + + EM ++I + + Sbjct: 183 EVGLEPIGDNLFRETQASGAPVPGDPKEDGYGSIMQAMLETSNVDPVKEMTELIAAQRSY 242 Query: 221 NSITTLIDENEKSMLEAIRNIA 242 + +I +++ +N+ Sbjct: 243 EMNSKVIQASDEMAAVVSKNLR 264 >gi|256111963|ref|ZP_05452914.1| flagellar basal body rod protein FlgF [Brucella melitensis bv. 3 str. Ether] gi|265993412|ref|ZP_06105969.1| flagellar basal body rod protein FlgF [Brucella melitensis bv. 3 str. Ether] gi|262764282|gb|EEZ10314.1| flagellar basal body rod protein FlgF [Brucella melitensis bv. 3 str. Ether] Length = 243 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 79/242 (32%), Positives = 129/242 (53%), Gaps = 4/242 (1%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 S +GL++ + LE+R+ +A N++N TVGFR KF +V +D +SF + Sbjct: 3 NNSIYVGLSSLITLERRMDAIAHNVANASTVGFRGEGTKFDTIVSDKASD---DLSFATA 59 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 GK Y+ E G I T LD A++GDAW + +P+G + +RDGR K+ G VS +G Sbjct: 60 GKSYIRTEAGPLIKTDNPLDVAVKGDAWMSFSTPQGQVYSRDGRMKMLSTGDPVSVTGNA 119 Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 LD+ PI + + G I Q G + +GLY++ SG+ P+ Sbjct: 120 I-LDVGGAPIVLNPGGGAPRISSDGAIYQNGVQVGAIGLYTIPADADLAYAGTSGVIPSK 178 Query: 182 PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 P P+ D + V V +G +E SN ++M EM ++I +++ F + L+ + E ++ EAI+ + Sbjct: 179 PAQPVVDDNSVGVVQGMIEGSNVDAMTEMTRLISISRAFEQVNNLLSQQEATVSEAIKTL 238 Query: 242 AS 243 S Sbjct: 239 GS 240 >gi|260431748|ref|ZP_05785719.1| flagellar basal-body rod protein FlgG [Silicibacter lacuscaerulensis ITI-1157] gi|260415576|gb|EEX08835.1| flagellar basal-body rod protein FlgG [Silicibacter lacuscaerulensis ITI-1157] Length = 261 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 45/259 (17%), Positives = 105/259 (40%), Gaps = 21/259 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + I A + R+ T+++N++N +T G+ + +F+++ Sbjct: 1 MRALKIAATGMSAQQMRVETISNNLANMNTTGYNARRAEFADLHYQQMARAGTVNASDGT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q V + G+ +TG++LD A+EG + + P G TRDG Sbjct: 61 VLPTGIQLGLGVRPAAVTVQLAQGALSATGSDLDIAIEGRGYLEVTLPNGQSAYTRDGSL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 K + +G +V++ G V ++ + + V + + +G+++ L S Sbjct: 121 KRSAEGLIVTSDGFPVVPEITIPDDARSISINAAGEVYAYFDDTAEGQLLGEFTLASFSN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 ++G ++ + T+++G+LEDS+ +++ E+ ++I + + Sbjct: 181 AKGLEAIGSNLFKETEASGAPIVGTPGEDGLGTLRQGYLEDSSVDAVREVTELIEAQRGY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 +I ++ M + Sbjct: 241 EMNAKVISAVDQMMGATTQ 259 >gi|295688784|ref|YP_003592477.1| flagellar basal-body rod protein FlgG [Caulobacter segnis ATCC 21756] gi|295430687|gb|ADG09859.1| flagellar basal-body rod protein FlgG [Caulobacter segnis ATCC 21756] Length = 262 Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats. Identities = 41/259 (15%), Positives = 89/259 (34%), Gaps = 21/259 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + + A + + +++N++N +TVGF+ + +F +++ Sbjct: 1 MQALRTAASGMSAQQLNVEVISNNIANMNTVGFKRQRAEFQDLLYQTIERAGSQSSSDGN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q V +G Y E G+ T LD A++G + + P TR G F Sbjct: 61 IVPTGVQVGGGVKAGSVYRITEQGTPTLTDNPLDLAIQGKGYLQILLPSGETAYTRAGNF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 D G +V+ G + I V K + + + I + L + Sbjct: 121 STNDQGQIVTEDGYTVQPGITVPQNAIDIIISKTGMVQVKLDGDPQPQTIGQLQLANFMN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ + + + + E SN +S+ E+ +I + + Sbjct: 181 EGGLEAIGDNLFLETAASGAANLAAPGQPGFGVLMQHYTEASNVDSVSEITALITAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + +I ++ + + Sbjct: 241 EMNSKVISTADQMLQTTSQ 259 >gi|262652|gb|AAB24738.1| flagellar basal body proximal rod protein [Caulobacter vibrioides] Length = 248 Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats. Identities = 60/235 (25%), Positives = 108/235 (45%), Gaps = 4/235 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTI--KVKFSEVVGAIKNDIDQKISF 58 M + +GL+ Q+ + + L VA+N++N +T GF+ V+ + A D + F Sbjct: 1 MDNALYVGLSRQMTVRRELDIVANNIANANTTGFKVEDLMVRTEQAKPAKTLDGSSPVKF 60 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSAS 118 V + G TG + D A+ G +F +++ G TRDGRF +G LV+ + Sbjct: 61 VMDTGVRRNFTQGPMTKTGGDYDLAINGMGFFKVQANGGERYTRDGRFTTNPEGILVTQA 120 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178 G PVLD I I + VG+ G +SQ + +GL D F + ++ Sbjct: 121 G-APVLDDGGGQITIDPRLGPVTVGKDGIVSQGAIRVGRIGLVRPDDLSTFAKDGDNLYR 179 Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 P + ++ + +G LE SN + E+ ++I + + + S+ ++D + Sbjct: 180 NTTNTAP-QPVTDAQIHQGMLEASNVQPVIEITKLIEIQRAYESVAKMMDNTAEL 233 >gi|254702556|ref|ZP_05164384.1| flagellar basal body rod protein FlgF [Brucella suis bv. 3 str. 686] gi|261753134|ref|ZP_05996843.1| flagellar basal body rod protein FlgF [Brucella suis bv. 3 str. 686] gi|261742887|gb|EEY30813.1| flagellar basal body rod protein FlgF [Brucella suis bv. 3 str. 686] Length = 243 Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats. Identities = 80/242 (33%), Positives = 130/242 (53%), Gaps = 4/242 (1%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 S +GL++ + LE+R+ +A N++N TVGFR KF +V +D +SF + Sbjct: 3 NNSIYVGLSSLITLERRMDAIAHNVANASTVGFRGEGTKFDTIVSDKASD---DVSFATA 59 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 GK Y+ E G I T LD A++GDAW + +P+G + +RDGR K+ G LVS +G Sbjct: 60 GKSYIRTEAGPLIKTDNPLDVAVKGDAWMSFSTPQGQVYSRDGRMKMLSTGDLVSVTGNA 119 Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 LD+ PI + + G I Q G + +GLY++ SG+ P+ Sbjct: 120 I-LDVGGAPIVLNPGGGAPRISSDGAIYQNGVQVGVIGLYTIPADADLAYAGTSGVIPSK 178 Query: 182 PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 P P+ D + V V +G +E SN ++M EM ++I +++ F + L+ + E ++ EAI+ + Sbjct: 179 PAQPVVDDNSVGVVQGMIEGSNVDAMTEMTRLISISRAFEQVNNLLSQQEATVSEAIKTL 238 Query: 242 AS 243 S Sbjct: 239 GS 240 >gi|313903629|ref|ZP_07837019.1| fagellar hook-basal body protein [Thermaerobacter subterraneus DSM 13965] gi|313466182|gb|EFR61706.1| fagellar hook-basal body protein [Thermaerobacter subterraneus DSM 13965] Length = 272 Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats. Identities = 46/249 (18%), Positives = 93/249 (37%), Gaps = 12/249 (4%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIK---VKFSEVVGAIKNDIDQK--- 55 + LA + +A +++N +T G++ + F E++ + + Sbjct: 25 LRGLYTAASGMLARVLQQERLAGDLANVNTPGYKASRNVTEAFPELLLSRLDGTGAPVVG 84 Query: 56 --ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113 + + G +++TG D ALEGD +F + P G TR G F V G Sbjct: 85 PLGTGTVVAEPGADMRPGPWVTTGRPQDLALEGDGFFVVMGPGGPAYTRAGNFTVGSQGY 144 Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRE 173 L + G + + F V G++ V+ T+ + G R Sbjct: 145 LQAPDGSPVLDTTGQP---LLVGSAQFTVRPDGQVVVGDAVLGTIARVTFANPAGLRRVG 201 Query: 174 NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 ++ P + V++G LE SN + + + M+ + F + + +++ Sbjct: 202 DNLWQATAESGPAVPAATP-VRQGVLEQSNVDPVQVVVAMLANFRAFEAAQRAVQAQDQT 260 Query: 234 MLEAIRNIA 242 + AI+ + Sbjct: 261 LGLAIQEVG 269 >gi|121602345|ref|YP_989400.1| flagellar basal body rod protein FlgG [Bartonella bacilliformis KC583] gi|120614522|gb|ABM45123.1| flagellar basal-body rod protein FlgG [Bartonella bacilliformis KC583] Length = 264 Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats. Identities = 40/262 (15%), Positives = 91/262 (34%), Gaps = 21/262 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55 S +I A + L +A+N++N +T G++ + +F++++ + Sbjct: 3 MRSLSIAATGMAAQQTNLDVIANNLANINTTGYKRARAEFADLMYVTDRAVGVPNMMNQA 62 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 V + G+FI TG LD A+ G+ WF ++ P + TR G F Sbjct: 63 IVPEGVMVGMGVRTAAVRTVNTQGAFIQTGNALDLAINGNGWFEIQDPNGNVFYTRSGAF 122 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEK-GEISQKGKVIATMGLYSVDM 165 +++ G +V+ G + + L + Sbjct: 123 NLSETGQVVTLDGNVVQPAITIPIGSKSITVSPDGTVFYKPAEEADPVEAGRLNLVNFVN 182 Query: 166 SQGFVRRENSGISPNIPPTPLEDLS-----GVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ + ++ + LE SN + + E+ ++I + + Sbjct: 183 EVGLEPVGDNLFRETPASGAPVPGNPKEDGYGSIMQATLEASNVDPVKEITELITAQRSY 242 Query: 221 NSITTLIDENEKSMLEAIRNIA 242 + +I +++ +N+ Sbjct: 243 EMTSKVIQASDEMAAVVSKNLR 264 >gi|254470342|ref|ZP_05083746.1| flagellar basal-body rod protein [Pseudovibrio sp. JE062] gi|211960653|gb|EEA95849.1| flagellar basal-body rod protein [Pseudovibrio sp. JE062] Length = 246 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 66/249 (26%), Positives = 114/249 (45%), Gaps = 12/249 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK-----NDIDQK 55 M+ + IGL+ Q AL + L VA+N++N +T G++ ++ F E + D+ Sbjct: 1 MENAQLIGLSRQSALRRNLDVVANNLANINTTGYKAQRLIFEEYLMPTAQATEFQRPDRP 60 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSL 114 +SF GS TG LD A+EGD + A+ G TR G + +G+L Sbjct: 61 LSFTQDVGTATVLTQGSIQLTGNPLDVAIEGDGYLAVTGAEGEQFYTRAGSLAIDPEGTL 120 Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174 V+ G + D PIQI +D + ++G IS I + +Y+ D Q Sbjct: 121 VTDGGLPVLAD--GAPIQINPEDGEITITKEGVISTGQGEIGRLDVYTFDNRQELKHVGV 178 Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 + + TV +G LE SN + E+ +MI +T+++ S++ ++ + + Sbjct: 179 NLF----SGLNPIPANNPTVIQGALEGSNVEGVREISRMIEITRQYQSVSKMMSQRNELR 234 Query: 235 LEAIRNIAS 243 +IR + S Sbjct: 235 QRSIRELGS 243 >gi|229542504|ref|ZP_04431564.1| flagellar basal-body rod protein FlgF [Bacillus coagulans 36D1] gi|229326924|gb|EEN92599.1| flagellar basal-body rod protein FlgF [Bacillus coagulans 36D1] Length = 262 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 53/263 (20%), Positives = 108/263 (41%), Gaps = 24/263 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKN------- 50 M + +A +++ +A+N+SN DT G++T + F +++ + + Sbjct: 1 MLRGLYTAASGMIAQQRKTDLLANNLSNADTPGYKTDQSSIRSFPKMLLSYMDKNGTTGE 60 Query: 51 ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALE------GDAWFALESPR-GIIL 100 + + V + + G TG D A+ G +F ++ + Sbjct: 61 VVKSVGSLATGVYMQETLPLFKQGDLEETGNRTDLAIFDQASPEGSLFFRIDDGNGHEVY 120 Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 TR+G F V +G L +ASG Y + + +I F+V G +++ G+ T+GL Sbjct: 121 TRNGNFTVNPEGYLTTASGHYVLDENGG---RIRTGGTDFSVDAAGAVTENGRYAGTIGL 177 Query: 161 YSVDMSQGFVRRENSGIS-PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 + + + N P +G +K+GFLE SN + M M+ + Sbjct: 178 AYAQNPAQLEKTGDGLYTLANNGALPAAGQNGFQIKQGFLESSNVDETKTMTDMMSAYRS 237 Query: 220 FNSITTLIDENEKSMLEAIRNIA 242 F + ++ + S+ +A+ ++ Sbjct: 238 FEANQKVLQAYDASLGKAVNDVG 260 >gi|23499891|ref|NP_699331.1| flagellar basal body rod protein FlgF [Brucella suis 1330] gi|148558748|ref|YP_001257194.1| flagellar basal body rod protein FlgF [Brucella ovis ATCC 25840] gi|163844323|ref|YP_001621978.1| flagellar basal body rod protein FlgF [Brucella suis ATCC 23445] gi|225628603|ref|ZP_03786637.1| flagellar basal body rod protein FlgF [Brucella ceti str. Cudo] gi|254699439|ref|ZP_05161267.1| flagellar basal body rod protein FlgF [Brucella suis bv. 5 str. 513] gi|254706314|ref|ZP_05168142.1| flagellar basal body rod protein FlgF [Brucella pinnipedialis M163/99/10] gi|254711394|ref|ZP_05173205.1| flagellar basal body rod protein FlgF [Brucella pinnipedialis B2/94] gi|254711993|ref|ZP_05173804.1| flagellar basal body rod protein FlgF [Brucella ceti M644/93/1] gi|254715063|ref|ZP_05176874.1| flagellar basal body rod protein FlgF [Brucella ceti M13/05/1] gi|256029976|ref|ZP_05443590.1| flagellar basal body rod protein FlgF [Brucella pinnipedialis M292/94/1] gi|256158141|ref|ZP_05456057.1| flagellar basal body rod protein FlgF [Brucella ceti M490/95/1] gi|256252908|ref|ZP_05458444.1| flagellar basal body rod protein FlgF [Brucella ceti B1/94] gi|261216770|ref|ZP_05931051.1| flagellar basal body rod protein FlgF [Brucella ceti M13/05/1] gi|261219997|ref|ZP_05934278.1| flagellar basal body rod protein FlgF [Brucella ceti B1/94] gi|261313761|ref|ZP_05952958.1| flagellar basal body rod protein FlgF [Brucella pinnipedialis M163/99/10] gi|261319000|ref|ZP_05958197.1| flagellar basal body rod protein FlgF [Brucella pinnipedialis B2/94] gi|261319637|ref|ZP_05958834.1| flagellar basal body rod protein FlgF [Brucella ceti M644/93/1] gi|261749890|ref|ZP_05993599.1| flagellar basal body rod protein FlgF [Brucella suis bv. 5 str. 513] gi|265986997|ref|ZP_06099554.1| flagellar basal body rod protein FlgF [Brucella pinnipedialis M292/94/1] gi|265996658|ref|ZP_06109215.1| flagellar basal body rod protein FlgF [Brucella ceti M490/95/1] gi|294853152|ref|ZP_06793824.1| flagellar basal-body rod protein FlgF [Brucella sp. NVSL 07-0026] gi|23463466|gb|AAN33336.1| flagellar basal-body rod protein FlgF [Brucella suis 1330] gi|148370033|gb|ABQ62905.1| flagellar basal-body rod protein FlgF [Brucella ovis ATCC 25840] gi|163675046|gb|ABY39156.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] gi|225616449|gb|EEH13497.1| flagellar basal body rod protein FlgF [Brucella ceti str. Cudo] gi|260918581|gb|EEX85234.1| flagellar basal body rod protein FlgF [Brucella ceti B1/94] gi|260921859|gb|EEX88427.1| flagellar basal body rod protein FlgF [Brucella ceti M13/05/1] gi|261292327|gb|EEX95823.1| flagellar basal body rod protein FlgF [Brucella ceti M644/93/1] gi|261298223|gb|EEY01720.1| flagellar basal body rod protein FlgF [Brucella pinnipedialis B2/94] gi|261302787|gb|EEY06284.1| flagellar basal body rod protein FlgF [Brucella pinnipedialis M163/99/10] gi|261739643|gb|EEY27569.1| flagellar basal body rod protein FlgF [Brucella suis bv. 5 str. 513] gi|262550955|gb|EEZ07116.1| flagellar basal body rod protein FlgF [Brucella ceti M490/95/1] gi|264659194|gb|EEZ29455.1| flagellar basal body rod protein FlgF [Brucella pinnipedialis M292/94/1] gi|294818807|gb|EFG35807.1| flagellar basal-body rod protein FlgF [Brucella sp. NVSL 07-0026] Length = 243 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 80/242 (33%), Positives = 130/242 (53%), Gaps = 4/242 (1%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 S +GL++ + LE+R+ +A N++N TVGFR KF +V +D +SF + Sbjct: 3 NNSIYVGLSSLITLERRMDAIAHNVANASTVGFRGEGTKFDTIVSDKASD---DVSFATA 59 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 GK Y+ E G I T LD A++GDAW + +P+G + +RDGR K+ G LVS +G Sbjct: 60 GKSYIRTEAGPLIKTDNPLDVAVKGDAWMSFSTPQGQVYSRDGRMKMLSTGDLVSVTGNA 119 Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 LD+ PI + + G I Q G + +GLY++ SG+ P+ Sbjct: 120 I-LDVGGAPIVLNPGGGAPRISSDGAIYQNGVQVGAIGLYTIPADADLAYAGTSGVIPSK 178 Query: 182 PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 P P+ D + V V +G +E SN ++M EM ++I +++ F + L+ + E ++ EAI+ + Sbjct: 179 PAQPVVDDNSVGVVQGMIEGSNVDAMTEMTRLISISRAFEQVNNLLSQQEATVSEAIKTL 238 Query: 242 AS 243 S Sbjct: 239 GS 240 >gi|86750895|ref|YP_487391.1| flagellar basal body rod protein FlgF [Rhodopseudomonas palustris HaA2] gi|86573923|gb|ABD08480.1| Flagellar basal body rod protein [Rhodopseudomonas palustris HaA2] Length = 253 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 61/251 (24%), Positives = 119/251 (47%), Gaps = 11/251 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND-----IDQK 55 MQ + +GL+ Q+ LE+++ VA+N++N +T GF+ + F E + ++ D++ Sbjct: 1 MQNTLLVGLSRQVVLERQMDVVANNLANMNTNGFKAQRSVFQEYLNTGAHEDNFQRPDRR 60 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115 +SFV YL G T LD A++G A+ +++P G TRDG+ + G LV Sbjct: 61 VSFVQDRAAYLDFSTGPMTQTKDPLDVAIDGSAFLVVQTPAGERFTRDGKLSINPRGQLV 120 Query: 116 SASGKYPVLDM----ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171 ++SG + + + + NV + + + L S Q + Sbjct: 121 NSSGYPVLGNSGPIVFQPTDKAINIAQDGNVSVVEGTATIDSLRGKLRLVSFARPQSLEK 180 Query: 172 RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 + ++ + P + V++G++E SN NS+ EM +M+ +T+ + +++L+ + Sbjct: 181 QGDNLFAATSD--PGAPDTKAIVRQGYVEKSNVNSVLEMTRMLDVTRSYQKMSSLLQQEG 238 Query: 232 KSMLEAIRNIA 242 AI +A Sbjct: 239 DLQKTAIERLA 249 >gi|197335127|ref|YP_002156698.1| flagellar basal-body rod protein FlgG [Vibrio fischeri MJ11] gi|197316617|gb|ACH66064.1| flagellar basal-body rod protein FlgG [Vibrio fischeri MJ11] Length = 262 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 46/262 (17%), Positives = 91/262 (34%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + + A + ++T+++N++N TVGF+ + F ++ N + Sbjct: 1 MNPALWVSKTGLDAQQTNIATISNNLANASTVGFKKSRAVFEDLFYQNVNQAGAQSTQNT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 S G+ +T +D +EG +F + P I TR+G+F Sbjct: 61 ELPTGLMLGSGSKVVATQKVFTNGNAQTTSNGMDMMIEGKGFFQVTMPDGNIGYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG--EISQKGKVIATMGLYSVD 164 + D+G++V+ Y + VP + Q +VI + Sbjct: 121 TLNDEGAIVTTGAGYRLEPEIVVPEDAINVTVGTDGEVSVRLRGQQDNQVIGQINTVDFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + P ++ V++ LE SN N E+ MI + Sbjct: 181 NPGGLEPVGQNLYLPTGASGDPQEGTPGLEGFGAVRQSMLEASNVNVTEELVNMIEAQRV 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I +K + + Sbjct: 241 YEMNSKVISAVDKMASFVNQQL 262 >gi|254437698|ref|ZP_05051192.1| flagellar basal-body rod protein FlgG [Octadecabacter antarcticus 307] gi|198253144|gb|EDY77458.1| flagellar basal-body rod protein FlgG [Octadecabacter antarcticus 307] Length = 257 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 44/257 (17%), Positives = 99/257 (38%), Gaps = 20/257 (7%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--------- 55 ++ A + R+ +A+N+SN +TVGF++ +V F ++ + + Sbjct: 1 MHVAKTGLNAQQTRMQVIANNLSNLNTVGFKSDRVNFESLLYQVSRAGGDQTSEGTALTS 60 Query: 56 ----ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTD 110 + V + G ++T D A++G +F + P + TR+G F + Sbjct: 61 ALALGTGVRAVNTQKLYTQGGMVNTDNSFDLAIDGQGFFQVLMPDGRVGYTRNGSFSRSA 120 Query: 111 DGSLVSASGKYPVLDMASVPIQIP-QKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169 DG++ +ASG ++ + + V + + + + + L + +G Sbjct: 121 DGTMTTASGYVIQPEIRIPDEAVEVNISQDGIVSVRSSGQEVAQEVGQLSLATFANPRGL 180 Query: 170 VRRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224 S + + + +G LE SN N + ++ +MI + + + Sbjct: 181 QPIGESFVVETTASGAATVAAPQSQGLGKLMQGALEASNVNVVQQLVEMIETQRAYEVSS 240 Query: 225 TLIDENEKSMLEAIRNI 241 I +++ M N+ Sbjct: 241 KAITSSDEMMRYISNNL 257 >gi|319409187|emb|CBI82831.1| Flagellar basal-body rod protein flgG [Bartonella schoenbuchensis R1] Length = 264 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 40/262 (15%), Positives = 93/262 (35%), Gaps = 21/262 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55 S +I A + L +A+N++N +T GF+ + +F++++ + Sbjct: 3 MRSLSIAATGMAAQQTNLDVIANNLANINTTGFKRARAEFADLMYVADRAVGVPNMLNQA 62 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 V + G+F+ TG LD A+ G+ WF ++ P + TR G F Sbjct: 63 IVPEGAMIGMGVRTAAVRKVNMQGAFVQTGNALDLAINGNGWFEVQDPNGNVFYTRSGAF 122 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 +++ G + + G + V + ++ + L + Sbjct: 123 NLSETGQIETLDGNLVQPAITIPIGSKNITVSPDGTVYYQTDMDPTPVEAGRLNLVNFVN 182 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 + G ++ + + LE SN + + E+ ++I + + Sbjct: 183 AVGLEAVGDNLFRETPASGAPVPGFPKDDGYGGIMQAMLESSNVDPVKEITELIAAQRSY 242 Query: 221 NSITTLIDENEKSMLEAIRNIA 242 + +I +++ +N+ Sbjct: 243 EMNSKVIQASDEMAAVVSKNLR 264 >gi|261253612|ref|ZP_05946185.1| flagellar basal-body rod protein FlgG [Vibrio orientalis CIP 102891] gi|260937003|gb|EEX92992.1| flagellar basal-body rod protein FlgG [Vibrio orientalis CIP 102891] Length = 262 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 46/262 (17%), Positives = 94/262 (35%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + + A + +ST+++N++N TVG++ + F ++ N + Sbjct: 1 MHPALWVSKTGLDAQQTNISTISNNLANASTVGYKKSRAVFEDLFYQNINQPGGQSSQNT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + G+ +T LD +EGD +F + P I +R+G+F Sbjct: 61 ELPSGLMLGAGSKVVATQKVHTQGNTQTTNNSLDMMIEGDGFFQILMPDGNIGYSRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD--EIFNVGEKGEISQKGKVIATMGLYSVD 164 V D+G +V++ Y + ++P V + Q +V+ + Sbjct: 121 TVNDEGVIVTSGAGYALEPEIAIPEDAQSITIGTDGEVSVRIRGQQDNQVVGQIATVDFV 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + ++ V++ LE SN N E+ MI + Sbjct: 181 NPGGLEPIGQNLYMATGASGDPQEGVPGFDGFGDVRQSMLETSNVNVTEELVNMIEAQRV 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I +K M + + Sbjct: 241 YEMNSKVISAVDKMMSFVNQQL 262 >gi|90422600|ref|YP_530970.1| flagellar basal body rod protein FlgF [Rhodopseudomonas palustris BisB18] gi|90104614|gb|ABD86651.1| flagellar basal body rod protein [Rhodopseudomonas palustris BisB18] Length = 243 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 79/242 (32%), Positives = 130/242 (53%), Gaps = 4/242 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 MQ++ + L+AQ++LE+RL T+A+NM+N T FR VKF + + Q ++F Sbjct: 1 MQSALYVSLSAQVSLEKRLETIANNMANMKTTAFRADAVKFETALSRAAS---QPVAFAT 57 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 G ++S+ GS TG LD A+ G++W P G + TRDGR +++ G L + +G Sbjct: 58 PGDNFISRAAGSVTQTGNNLDVAVVGNSWMGFTGPSGPVYTRDGRMQISSTGELQTITGY 117 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 PVLD PI + + G ISQ + +GL+ + R NSG+ P+ Sbjct: 118 -PVLDAGGTPIIVDPDAGPLTISRNGTISQGTNEVGMLGLFEIAADAKLARFANSGVVPD 176 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 T + D ++G++E SN + + EM Q++ T+ F S+++LI+ +E +M AIR Sbjct: 177 RGATAVVDFINTGFQQGYVEGSNVDPLSEMTQLMTATRAFQSVSSLIESSEGTMQNAIRT 236 Query: 241 IA 242 + Sbjct: 237 LG 238 >gi|59712479|ref|YP_205255.1| flagellar basal body rod protein FlgG [Vibrio fischeri ES114] gi|59480580|gb|AAW86367.1| flagellar distal rod protein FlgG [Vibrio fischeri ES114] Length = 262 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 46/262 (17%), Positives = 91/262 (34%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + + A + ++T+++N++N TVGF+ + F ++ N + Sbjct: 1 MNPALWVSKTGLDAQQTNIATISNNLANASTVGFKKSRAVFEDLFYQNVNQAGAQSTQNT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 S G+ +T +D +EG +F + P I TR+G+F Sbjct: 61 ELPTGLMLGSGSKVVATQKVFTNGNAQTTSNGMDMMIEGKGFFQVTMPDGNIGYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG--EISQKGKVIATMGLYSVD 164 + D+G++V+ Y + VP + Q +VI + Sbjct: 121 TLNDEGAIVTTGAGYRLEPEIVVPEDAINVTVGTDGEVSVRLRGQQDNQVIGQINTVDFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + P ++ V++ LE SN N E+ MI + Sbjct: 181 NPGGLEPVGQNLYLPTGASGDPQEGTPGLDGFGAVRQSMLEASNVNVTEELVNMIEAQRV 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I +K + + Sbjct: 241 YEMNSKVISAVDKMASFVNQQL 262 >gi|254470407|ref|ZP_05083811.1| flagellar basal-body rod protein FlgG [Pseudovibrio sp. JE062] gi|211960718|gb|EEA95914.1| flagellar basal-body rod protein FlgG [Pseudovibrio sp. JE062] Length = 260 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 41/258 (15%), Positives = 91/258 (35%), Gaps = 20/258 (7%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + +I A E + +++N++N T G++ + F +++ + + Sbjct: 1 MKALHIAATGMKAQELNVEVISNNVANMRTTGYKRQRADFQDLLYENQRRMGTETSDAGT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 Q S V + GS TG E D + G+ +F ++ P G I TRDG F Sbjct: 61 IVPNGVQIGSGVRTAATTRIMSPGSVTQTGNEYDVTIRGEGFFQIQRPDGTIGYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 + G LV+ G + + + + + + + + + Sbjct: 121 ARSQTGQLVTKDGYPVQPGITIPDNARDVTINVQGLVQAMDDNDQVLNLGQLETARFTNQ 180 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFN 221 G ++ P + + T + + LE SN +++ E+ +I + + Sbjct: 181 AGLEAIGDNLFLETPASGPPQLNNPGTAGFGNILQRHLESSNVDAVTELSSLISAQRAYE 240 Query: 222 SITTLIDENEKSMLEAIR 239 + +I ++ Sbjct: 241 MNSKIIKAADEMYSTTTN 258 >gi|172057880|ref|YP_001814340.1| hypothetical protein Exig_1871 [Exiguobacterium sibiricum 255-15] gi|171990401|gb|ACB61323.1| protein of unknown function DUF1078 domain protein [Exiguobacterium sibiricum 255-15] Length = 278 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 48/275 (17%), Positives = 96/275 (34%), Gaps = 36/275 (13%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ + +L V +N++N +T G++ +V F ++V Sbjct: 1 MLRSMYSGISGLKNFQTKLDVVGNNIANVNTFGYKKGRVTFKDLVSQSVGSASGNGGGVG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 Q + G+ +TG LD A+ G+ +F +++ GI R G F Sbjct: 61 GANPKQVGLGASMATVDSVSNQGALQNTGRTLDVAISGEGFFQIQTADGIRYARSGNFYT 120 Query: 109 TDDGSLVSASGKYPVLDMAS-------------------VPIQIPQKDEIFNVGEKGEIS 149 DG+LV+ G Y + + + + + Sbjct: 121 DLDGNLVTGDGNYVIGSDNAGPLGQPTIPLGGGYKTINIPANAQNLSIGKDGLVTYVDPA 180 Query: 150 QKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNA 204 + + L + G + ++ S + + T + G LE SN Sbjct: 181 GTLQQAGYISLANFPNPGGLEKSGSNMYSISQNSGQPTSATPSTNGLGQLTSGTLEMSNV 240 Query: 205 NSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + E +MI + F + T +I +++ + E + Sbjct: 241 DLSEEFTEMIIAQRGFQANTRIITTSDQILEELVN 275 >gi|254292906|ref|YP_003058929.1| flagellar basal-body rod protein FlgF [Hirschia baltica ATCC 49814] gi|254041437|gb|ACT58232.1| flagellar basal-body rod protein FlgF [Hirschia baltica ATCC 49814] Length = 255 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 66/255 (25%), Positives = 116/255 (45%), Gaps = 16/255 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV--VGAIKNDIDQKISF 58 M S IGL+ Q L +++ A+N++N +T GF+ + E+ A D I+F Sbjct: 1 MDNSLAIGLSTQQLLRKKMDVTANNLANMNTTGFKVEHLVNHEISDRPARATDKPHDITF 60 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSA 117 + GS TG LD A++G+ +F +E+ I TRDG F + DG LV+ Sbjct: 61 TQGWQLQRDMNNGSIAQTGNPLDVAIDGNGFFEVEAENGDIFYTRDGEFSMNPDGMLVTR 120 Query: 118 SGKYPVLDM----------ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 +G + VPI + + + + G I Q G + + L + ++ + Sbjct: 121 NGYLLRGEGEVLDGEKLLANGVPIALNPEGGEIVINKDGSIMQDGAQLGQLKLKTFELPE 180 Query: 168 GFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 + N+ I + T+ +GF+E SN +++ EM QMI +++ + S+ LI Sbjct: 181 ALEKVGNNLY---ISGEQEPIDANATLAQGFVESSNVSAIVEMTQMIEISRAYQSVAKLI 237 Query: 228 DENEKSMLEAIRNIA 242 + +AI +A Sbjct: 238 SNSNDMREKAINKLA 252 >gi|163733142|ref|ZP_02140586.1| flagellar basal-body rod protein FlgF, putative [Roseobacter litoralis Och 149] gi|161393677|gb|EDQ18002.1| flagellar basal-body rod protein FlgF, putative [Roseobacter litoralis Och 149] Length = 237 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 71/241 (29%), Positives = 113/241 (46%), Gaps = 6/241 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M+ S + Q L + + VA+N++N T GFR V FSE V ++ D +S Sbjct: 1 MENSGYTTITRQSGLAKEMRVVANNIANAATSGFRQEGVIFSEYVKSV--DGASSLSMGQ 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + S G TG + DFA+EGD +F +E+P G LTR G F DG LV+ G Sbjct: 59 ADARNTSFAQGGLTQTGGQFDFAIEGDGFFLVETPLGERLTRAGAFSPNADGDLVTPDGY 118 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 LD P+ IP E V G IS G + +GL QG +R + + Sbjct: 119 RV-LDAGGAPVFIPPGAEDIAVSADGTISTNGDPVGQLGLVQPLNPQGLLREDGVMFRAD 177 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 P E + + F+E+SN N + ++ +MI + + + + ++ ++ + +A+R Sbjct: 178 EGYEPAEQG---RILQSFVENSNVNPILQLTRMIEVQRAYELGASFLEAEDERVRQAMRT 234 Query: 241 I 241 I Sbjct: 235 I 235 >gi|256059629|ref|ZP_05449826.1| flagellar basal body rod protein FlgF [Brucella neotomae 5K33] gi|261323599|ref|ZP_05962796.1| flagellar basal body rod protein FlgF [Brucella neotomae 5K33] gi|261299579|gb|EEY03076.1| flagellar basal body rod protein FlgF [Brucella neotomae 5K33] Length = 243 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 80/242 (33%), Positives = 130/242 (53%), Gaps = 4/242 (1%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 S +GL++ + LE+R+ +A N++N TVGFR KF +V +D +SF + Sbjct: 3 NNSIYVGLSSLITLERRMDAIAHNVANASTVGFRGEGTKFDTIVSDKASD---DVSFATA 59 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 GK Y+ E G I T LD A++GDAW + +P+G + +RDGR K+ G LVS +G Sbjct: 60 GKSYIRTEAGPLIKTDNPLDVAVKGDAWMSFSTPQGQVYSRDGRMKMLSTGDLVSVTGNA 119 Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 LD+ PI + + G I Q G + +GLY++ SG+ P+ Sbjct: 120 I-LDVGGAPIVLNPGGGAPRISSDGAIYQNGVQVGAIGLYTIPADADLAYAGTSGVIPSK 178 Query: 182 PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 P P+ D + V V +G +E SN ++M EM ++I +++ F + L+ + E ++ EAI+ + Sbjct: 179 PAQPVVDDNSVGVVQGMIESSNVDAMTEMTRLISISRAFEQVNNLLSQQEATVSEAIKTL 238 Query: 242 AS 243 S Sbjct: 239 GS 240 >gi|328958276|ref|YP_004375662.1| flagellar basal body rod protein FlgG [Carnobacterium sp. 17-4] gi|328674600|gb|AEB30646.1| flagellar basal body rod protein FlgG [Carnobacterium sp. 17-4] Length = 289 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 54/286 (18%), Positives = 99/286 (34%), Gaps = 47/286 (16%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN------DIDQ 54 M S G+ ++ ++ +++N++N +T F+T +V+F +++ + Q Sbjct: 1 MLKSLYSGVTGMKNIQTKMDVISNNIANVNTTAFKTGRVRFEDMLSQTNASAQAGINAQQ 60 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEG--DAWFALESPRGIILTRDGRFKVTDDG 112 V G GS STG LDF +E ++F + TRDG G Sbjct: 61 VGLGVQVGSIDTVMTGGSLQSTGRALDFGIENGDSSFFTVTDGTNTFYTRDGGLYADPSG 120 Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI----------------- 155 +LV++SG P ++G E + I Sbjct: 121 NLVTSSGLQVQGYSQGAPATNDAAFVPGSLGTTMEPINIPQTIPNPDGGDALELQSYSVD 180 Query: 156 -----------------ATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS-----GVT 193 +GL S G + + S + + + Sbjct: 181 NDGFIVGSYSGGKSMVLGRVGLTSFSNPDGLQKNGGNLYSASANSGDPVAGNPGDAGYGS 240 Query: 194 VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 V+ GFLE SN + E +MI ++ + + + I ++ + E I Sbjct: 241 VRSGFLEMSNVDLANEFTEMIVTSRSYQANSRSITTSDTMLEELIN 286 >gi|307293785|ref|ZP_07573629.1| flagellar basal-body rod protein FlgG [Sphingobium chlorophenolicum L-1] gi|306879936|gb|EFN11153.1| flagellar basal-body rod protein FlgG [Sphingobium chlorophenolicum L-1] Length = 262 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 44/258 (17%), Positives = 88/258 (34%), Gaps = 20/258 (7%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK-------- 55 + ++ A ++ +A+N++N +T F+ + F + Sbjct: 5 ALHVARTGLDAQNTKMRVIANNLANVNTTAFKRDRADFETLAYQQIVAAGANSDSENKFA 64 Query: 56 -----ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVT 109 S VA G+ TG LD A+EG +F ++ P I TR G F T Sbjct: 65 TGLNLGSGVALQGTSKINAQGTLNQTGNTLDMAIEGSGYFQVQQPDGSIAYTRAGNFTTT 124 Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDMSQG 168 +G +V++ G + + + + + + L S G Sbjct: 125 AEGVVVTSDGLPLIPQITVPEGATSITIGNDGTVSATLQGQTEPTQLGQVELASFMNPGG 184 Query: 169 FVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223 + + + V+ G+LE SN N + E+ MI + + Sbjct: 185 LQSTGGNLLKETAASGTPQVGVAGLDGRGVVRSGYLETSNVNVVEELVDMIETQRAYEVN 244 Query: 224 TTLIDENEKSMLEAIRNI 241 + +I ++ + A + + Sbjct: 245 SKMIKATDEMLQYANQQL 262 >gi|92116936|ref|YP_576665.1| flagellar basal body rod protein FlgG [Nitrobacter hamburgensis X14] gi|91799830|gb|ABE62205.1| Flagellar basal-body rod FlgG [Nitrobacter hamburgensis X14] Length = 262 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 40/257 (15%), Positives = 88/257 (34%), Gaps = 21/257 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55 + A E + +++N++N T G++ + F +++ + + Sbjct: 1 MRALYTAATGMAAQELNVQVISNNIANLRTTGYKKQRAAFQDLIYDHVRRVGAQASDQGT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 V + G+ TG +LD A+ G+ +F ++ P G TRDG F Sbjct: 61 ILPVGIDLGGGVKTVGTPRLMSQGTLSQTGNDLDIAIRGEGFFKIQMPDGTYQYTRDGTF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165 ++ + G +V+A G + V+ +GL Sbjct: 121 QMDNQGRIVNAQGNPVQPTITIPQNSAGITINAQGQVSVTLPGQTTPTVLGQIGLTRFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ + P +D +++ LE +N + E+ +I + + Sbjct: 181 KAGLQPVGDNNFTETPASGPPQDGIANIDGYGDMQQSSLEQANVEVVSEISDLIAAQRAY 240 Query: 221 NSITTLIDENEKSMLEA 237 +I ++ + A Sbjct: 241 EMNAKVISAADQMLQSA 257 >gi|254477684|ref|ZP_05091070.1| flagellar basal-body rod protein FlgG [Ruegeria sp. R11] gi|214031927|gb|EEB72762.1| flagellar basal-body rod protein FlgG [Ruegeria sp. R11] Length = 261 Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 101/259 (38%), Gaps = 21/259 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + I A + R+ T+++N++N +T G+ + +F+++ Sbjct: 1 MRALKIAATGMTAQQLRVETISNNLANMNTTGYNARRAEFADLHYQQVTRAGTVNASDGT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q V + + G+ TG +LD A++G + + P G TRDG Sbjct: 61 VLPTGVQVGLGVRASAISIHLAQGALTQTGNDLDVAIDGKGYLEVTLPSGQSAYTRDGSL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 K + +G +V++ G D+ + + V + + +G+++ + L Sbjct: 121 KRSAEGLIVTSDGFTVSPDITIPADARNVSINADGEVYAYFDETAEGQLMGQLTLAGFSN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 +G ++ S T+++G+LE S+ +++ E+ ++I + + Sbjct: 181 PKGLEALGSNLFVETEASGAATVASPGENGLGTLRQGYLEASSVDAVREVTELIEAQRGY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 +I ++ M + Sbjct: 241 EMNAKVISAVDQMMGATTQ 259 >gi|254473360|ref|ZP_05086757.1| flagellar basal body rod protein [Pseudovibrio sp. JE062] gi|211957476|gb|EEA92679.1| flagellar basal body rod protein [Pseudovibrio sp. JE062] Length = 241 Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats. Identities = 79/239 (33%), Positives = 133/239 (55%), Gaps = 4/239 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 S + L+ Q+ALE+RL TVA N++N +T G+R +VKF +V K ++F ++G+ Sbjct: 5 SLYVSLSGQMALERRLETVARNVANMETAGYRADEVKFDSLV---KRPGKDPVTFASTGE 61 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPV 123 Y+S++ G+ TG LD A+EG W +++ G+ TRDGRF++ DG L S G PV Sbjct: 62 NYISRQAGAIKQTGNSLDVAIEGSGWLGIQTGNGVAYTRDGRFQIGVDGILRSIEGN-PV 120 Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183 LD + PI + + + G I Q+G+ + +GL+S+ R NSG+ P+ Sbjct: 121 LDSGNAPIILDPLGGPPEISKDGTIYQEGRQVGVLGLFSIPEDAKLSRTGNSGVIPDAIA 180 Query: 184 TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 P+ D + +GF+E +N N + E+ ++I +T+ F S +++ E + IR + Sbjct: 181 EPVLDFAENGFAQGFVEGANINPISEITKLITITRAFESTNSMMQSVESIRQQTIRKLG 239 >gi|149912834|ref|ZP_01901368.1| flagellar basal-body rod protein FlgG [Roseobacter sp. AzwK-3b] gi|149813240|gb|EDM73066.1| flagellar basal-body rod protein FlgG [Roseobacter sp. AzwK-3b] Length = 261 Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 97/259 (37%), Gaps = 21/259 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + I A + R+ T+++N++N T G+ T + +FS++ Sbjct: 1 MRALKIAATGMTAQQLRVETISNNLANMSTTGYNTRRAEFSDLHYQQMARPGTVNASDGT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q V + GS +T +LD A++G+ + + P G TRDG Sbjct: 61 VLPTGVQLGLGVRPAAVSIHLAQGSLSATNGDLDLAIDGNGYLEVTLPSGQSAYTRDGAL 120 Query: 107 KVTDDGSLVSASGKY-PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 K + DG +V++ G ++ + V + + + I + L Sbjct: 121 KRSADGLIVTSDGFSLVPEITIPADVRSISINAAGEVFAYFAETTEAQQIGEITLAGFSN 180 Query: 166 SQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 +G N+ P T+++G+LEDS+ + + E+ ++I + + Sbjct: 181 PKGLEAAGNNLFLETEASGPSLVSTPGQDGLGTLRQGYLEDSSVDPVREVTELIEAQRGY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 +I ++ + + Sbjct: 241 ELNAKVISAADQMLGATAQ 259 >gi|238916190|ref|YP_002929707.1| flagellar basal-body rod protein FlgG [Eubacterium eligens ATCC 27750] gi|238871550|gb|ACR71260.1| flagellar basal-body rod protein FlgG [Eubacterium eligens ATCC 27750] Length = 277 Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats. Identities = 47/274 (17%), Positives = 98/274 (35%), Gaps = 35/274 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--------- 51 M S + ++ + + T+A+N++N +T+G++ + +F ++ Sbjct: 1 MMRSLWTAASGMMSQQTSVDTIANNLANVNTIGYKQEQTQFKSLLYQNLQAKTTSANGDD 60 Query: 52 ---IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF--ALESPRGIILTRDGRF 106 Q G+ +T + DFA++G+ +F + + TR+G F Sbjct: 61 KPVGAQVGLGSRVSAVTSIYTQGALNATDSLTDFAIDGNGFFAVRDTNTGDTVYTRNGHF 120 Query: 107 KV--TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVG-------------EKGEISQK 151 +G ++S S YPVL I + Q + E + Sbjct: 121 TWATATEGVMLSTSEGYPVLSADGAEIVLGQDANGEDYKTNLITIDTDGNLLYPDESNNP 180 Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPN------IPPTPLEDLSGVTVKRGFLEDSNAN 205 + +GLY G + +S + + E ++++ +LE SN Sbjct: 181 APIGIKIGLYQFSNPAGLDKLGSSYLGETEASGVPLNEDYDEVGKKSSLRQSYLEASNVQ 240 Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 EM +I + + + I ++ M +A Sbjct: 241 VATEMVNLITAQRAYELCSKAITTSDTMMEQANN 274 >gi|121596118|ref|YP_988014.1| flagellar basal-body rod protein FlgF [Acidovorax sp. JS42] gi|222112273|ref|YP_002554537.1| flagellar basal-body rod protein flgf [Acidovorax ebreus TPSY] gi|120608198|gb|ABM43938.1| flagellar basal-body rod protein FlgF [Acidovorax sp. JS42] gi|221731717|gb|ACM34537.1| flagellar basal-body rod protein FlgF [Acidovorax ebreus TPSY] Length = 246 Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats. Identities = 54/240 (22%), Positives = 86/240 (35%), Gaps = 5/240 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + A R + +A+N++N T GFR F V ++ F Sbjct: 1 MDRIIYTSMTGANAAAHRQAVLANNLANASTTGFRAEMSNFRSV--PLQGGGSTTRVFAL 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119 G +TG LD G+AWFA++ TR G F+VT G LV+++G Sbjct: 59 EATSGHVDTPGPAQTTGRPLDAMAVGNAWFAVQGLDGVETYTRAGSFQVTAAGQLVTSTG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS--QGFVRRENSGI 177 + D + P + G+V + + ++R + G+ Sbjct: 119 MAVLSDGGAPIDVPPNAEVTLGADGTITARLAGEVPQPVARLKLATPAADNPLKRGDDGL 178 Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 PL ++ G LE SN N + M MI ++F L+ E A Sbjct: 179 FRTAGGDPLPADPNARLRSGVLEGSNVNPVECMVGMIAAARQFEQQMRLLQTAESDDKSA 238 >gi|302874614|ref|YP_003843247.1| fagellar hook-basal body protein [Clostridium cellulovorans 743B] gi|307690775|ref|ZP_07633221.1| flagellar basal body rod protein FlgG [Clostridium cellulovorans 743B] gi|302577471|gb|ADL51483.1| fagellar hook-basal body protein [Clostridium cellulovorans 743B] Length = 255 Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 98/254 (38%), Gaps = 13/254 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + F ++ A + +L T+++N++N +T G+R ++ FS++V N + Sbjct: 1 MLSLFWNSKSSMNAQQNKLDTISNNIANVNTTGYRALQSNFSDLVYDSYNRLGTPNSGKD 60 Query: 56 -----ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVT 109 + + GS + T +FAL+G +F + + TR+G FK+ Sbjct: 61 TELLIGTGTRLASTIRNDVQGSLLETKVSTEFALDGPGFFKITTADGTEAYTRNGSFKID 120 Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM-SQG 168 +G L G Y ++ P++ + N + + + + Sbjct: 121 SNGDLCDDKGNYLSIEFNGQPVKFNPNNFAVNPDGTITVKEGEAARTVGRIPIFNAIGND 180 Query: 169 FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228 + + + + +G+LE+SN + EM MI + F + ++ Sbjct: 181 SFSSIADSLYVPKDGVQVYRENNTDILQGYLENSNVDMSKEMTDMIVTQRAFELSSKVLS 240 Query: 229 ENEKSMLEAIRNIA 242 ++ M + NI Sbjct: 241 TGDQ-MWGIVNNIR 253 >gi|78485810|ref|YP_391735.1| hypothetical protein Tcr_1469 [Thiomicrospira crunogena XCL-2] gi|78364096|gb|ABB42061.1| Flagellar basal-body rod protein FlgG [Thiomicrospira crunogena XCL-2] Length = 263 Score = 156 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 48/263 (18%), Positives = 99/263 (37%), Gaps = 22/263 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + RL+T+++N++N +T ++T + +F++++ Sbjct: 1 MNRALYVAKTGLEAQDFRLATISNNLANANTYAYKTGRAEFNDLMYQNVRQPGAQATQNE 60 Query: 54 --------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDG 104 Q + V + G+ + T +LD +EG +F + I+ TRDG Sbjct: 61 ENTFPSGLQLGTGVKAIGVQKIHTQGNAMVTDNQLDVMIEGKGFFQALDQDGNIMYTRDG 120 Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSV 163 F+V +G LV++SG ++ V K + + + + L + Sbjct: 121 SFEVNQNGDLVTSSGYLVEPNINIPLNTTEVFISSDGVVSAKEPGNPQPIAVGQLELATF 180 Query: 164 DMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 G + + E ++ +G LE SN N++ E+ MI + Sbjct: 181 INPAGLEATGKNFYIETLASGAPNVKNPEIEEAGSLLQGALESSNVNTVEELIGMIEAQR 240 Query: 219 KFNSITTLIDENEKSMLEAIRNI 241 + + I + M N+ Sbjct: 241 TYEMNSKAISAADGMMQYLNNNV 263 >gi|254500847|ref|ZP_05112998.1| flagellar basal-body rod protein FlgG [Labrenzia alexandrii DFL-11] gi|222436918|gb|EEE43597.1| flagellar basal-body rod protein FlgG [Labrenzia alexandrii DFL-11] Length = 260 Score = 156 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 37/258 (14%), Positives = 89/258 (34%), Gaps = 20/258 (7%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + A E + +++N++N T G++ + F +++ + Sbjct: 1 MRALYTAATGMKAQEYNVEVISNNVANMRTTGYKKQRADFQDLLYQNLRRMGTETSDDGT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP-RGIILTRDGRF 106 Q + V GS +TG ELD A+ G+ +F ++ P +RDG F Sbjct: 61 IVPTGIQIGTGVKLASTGRVMSQGSMENTGKELDIAIRGEGFFQIQLPGGATGYSRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 + +G LV+ G ++ + + + + + L Sbjct: 121 ERDQNGQLVTIDGYQLDPNITIPENTRDLTIAPSGKVQGVDEAGATVDLGQIQLARFVNK 180 Query: 167 QGFVRRENSGISPNIPPTPLEDLS-----GVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221 G ++ + + + ++ FLE +N +++ E+ +I + + Sbjct: 181 AGLEAIGDNLFLETDASGAPQTGNPNEDGYGSTQQFFLEMANVDAVTEIADLISAQRAYE 240 Query: 222 SITTLIDENEKSMLEAIR 239 + +I ++ + Sbjct: 241 MNSKVIQAADQMYSTTTQ 258 >gi|330830301|ref|YP_004393253.1| flagellar basal body rod protein FlgG [Aeromonas veronii B565] gi|328805437|gb|AEB50636.1| Flagellar basal body rod protein FlgG [Aeromonas veronii B565] Length = 262 Score = 156 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 44/261 (16%), Positives = 95/261 (36%), Gaps = 21/261 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + I A + +S ++N++N TVGF+ + F +++ N + Sbjct: 1 MNPALWISKTGLDAQQTNISVTSNNLANASTVGFKKSRAIFEDLLYQNINQPGGRSSADT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 + + G+ +T LD + G +F ++ P G TR+G+F Sbjct: 61 ELPSGLMLGAGAKVVATQKNHSQGNVQTTDNSLDLMISGRGYFEIQLPDGSAAYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG--KVIATMGLYSVD 164 + D+G++V+ YP+ +P + ++ G +V+ + + Sbjct: 121 TLNDEGTIVTPGNGYPLQPEIQIPENAQSVTVGEDGQVSVQLKGDGASQVVGQINISDFV 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQK 219 + G + + +K+G LE SN N E+ +I + Sbjct: 181 NASGLQPMGENMFVETQSSGAAAQGTAGADGLGVIKQGMLETSNVNVTEELVNLIQAQRV 240 Query: 220 FNSITTLIDENEKSMLEAIRN 240 + + ++ + M I+ Sbjct: 241 YEMNSKVLSAVDGMMSFLIQR 261 >gi|71282391|ref|YP_268224.1| flagellar basal body rod protein FlgG [Colwellia psychrerythraea 34H] gi|71148131|gb|AAZ28604.1| flagellar basal-body rod protein FlgG [Colwellia psychrerythraea 34H] Length = 262 Score = 156 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 37/262 (14%), Positives = 96/262 (36%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + I A + ++ +++N++N T+GF+ + F +++ N + Sbjct: 1 MNAALWISKTGLDAQTKDIAVISNNLANASTIGFKKSRAVFEDLLYQNINQPGGRTAQDT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + G I++ LD ++G+ +F ++ P +R+G+F Sbjct: 61 EAPSGLMLGAGTKVVATQKIHTQGDMITSDNALDLMIQGEGFFEIQMPDGSSAYSRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG--EISQKGKVIATMGLYSVD 164 + D+G++V+ Y + ++P + + V+ + L + Sbjct: 121 TMDDEGNMVTPGAGYMIQPQVTIPEDALSIIVSQDGEVSVTLQGQPDPAVVGQINLINFV 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + + ++ + +G LE SN N+ E+ +I + Sbjct: 181 NPTGLQPIGQNLYTETAVSGAPQEGVPGLEGYGMLVQGALETSNVNTTEELVNLIESQRV 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I ++ + + + Sbjct: 241 YEMNSKVISAVDEMLSYINQQM 262 >gi|83858806|ref|ZP_00952328.1| flagellar basal-body rod protein FlgG [Oceanicaulis alexandrii HTCC2633] gi|83853629|gb|EAP91481.1| flagellar basal-body rod protein FlgG [Oceanicaulis alexandrii HTCC2633] Length = 261 Score = 156 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 37/259 (14%), Positives = 95/259 (36%), Gaps = 21/259 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + + A + ++ N++N +T+ F+ + +F +++ + Sbjct: 1 MRALSTAATGMEAQSLAVEVISHNLANMNTIAFKRQRAEFEDLLYQTISQPGANSSNAGT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q V +G Y E G T D A+ G +F ++ P TR G F Sbjct: 61 IVPTGVQVGLGVNAGSVYRITEQGGMSETNNPYDVAISGQGYFRVQLPDGNDAYTRAGNF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASV-PIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 ++ +G +V+A G + + + + V + + +V+ L + Sbjct: 121 SLSPNGEIVTADGYAVMPGIVIPAEARQVVINNQGQVQVLLDGQPQPQVVGQFELATFPN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + ++ + + + ++++ F+E SN +++ E+ +I + + Sbjct: 181 EAGLEQIGDNLLLESAASGAPNLGAPTDPGFGSLRQRFVEVSNVDAVTEITSLIQAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 +I ++ + + Sbjct: 241 EMNARVITAADEMLATSSN 259 >gi|163738060|ref|ZP_02145476.1| flagellar basal-body rod protein FlgG [Phaeobacter gallaeciensis BS107] gi|163742544|ref|ZP_02149930.1| flagellar basal-body rod protein FlgG [Phaeobacter gallaeciensis 2.10] gi|161384129|gb|EDQ08512.1| flagellar basal-body rod protein FlgG [Phaeobacter gallaeciensis 2.10] gi|161388676|gb|EDQ13029.1| flagellar basal-body rod protein FlgG [Phaeobacter gallaeciensis BS107] Length = 261 Score = 156 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 101/259 (38%), Gaps = 21/259 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + I A + R+ T+++N++N +T G+ + +F+++ Sbjct: 1 MRALKIAATGMTAQQLRVETISNNLANMNTTGYNARRAEFADLHYQQVTRAGTVNASDGT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q V + + G+ TG +LD A++G + + P G TRDG Sbjct: 61 VLPTGVQVGLGVRASAISIHLAQGALSQTGNDLDVAIDGKGYLEVTLPSGQSAYTRDGAL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 K + +G +V++ G D+ + + V + + +G+++ + L Sbjct: 121 KRSAEGLVVTSDGFTVSPDITIPSDARNVSINADGEVYAYFDETAEGQLMGQLTLAGFAN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 +G ++ S T+++G+LE S+ +++ E+ ++I + + Sbjct: 181 PKGLEALGSNLFVETEASGAATVASPGENGLGTLRQGYLEASSVDAVREVTELIEAQRGY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 +I ++ M + Sbjct: 241 EMNAKVISAVDQMMGATTQ 259 >gi|254463756|ref|ZP_05077167.1| flagellar basal-body rod protein FlgG [Rhodobacterales bacterium Y4I] gi|206684664|gb|EDZ45146.1| flagellar basal-body rod protein FlgG [Rhodobacterales bacterium Y4I] Length = 261 Score = 156 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 41/259 (15%), Positives = 99/259 (38%), Gaps = 21/259 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + I A + R+ T+++N++N +T + + +F+++ + Sbjct: 1 MRALKIAATGMSAQQLRVETISNNLANMNTTAYNARRAEFADLHYQQISRAGTVNASDGT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q V + G+ T +LD A++G+ + + P G TRDG Sbjct: 61 VLPTGVQVGLGVRPAAVSVHLSQGALQQTNNDLDVAIDGNGYLEVTLPSGQSAYTRDGAL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 K + +G +V++ G ++ V + S +G+++ L S Sbjct: 121 KRSAEGLIVTSDGFAVSPEITIPDDATSISINAEGEVYGYFQDSPEGQLLGQFTLASFTN 180 Query: 166 SQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 +G ++ + + T+++G+LE S+ +++ E+ ++I + + Sbjct: 181 PKGLEAIGSNLFTETEASGAATVTTAGEDGLGTLRQGYLEGSSVDAVREVTELIEAQRGY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 +I ++ M + Sbjct: 241 EMNAKVISAVDQMMGATTQ 259 >gi|296534160|ref|ZP_06896654.1| flagellar basal-body rod protein FlgG [Roseomonas cervicalis ATCC 49957] gi|296265515|gb|EFH11646.1| flagellar basal-body rod protein FlgG [Roseomonas cervicalis ATCC 49957] Length = 262 Score = 156 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 41/257 (15%), Positives = 91/257 (35%), Gaps = 21/257 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 S NI +A + + +++N++N T ++ + +F +++ Sbjct: 1 MRSLNIAGTGMMAQQTNVEVISNNIANMSTTAYKRRRAEFQDLLYENLRRTGSQSSDQGT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q V + Y G T D A+ G+ +F ++ P TR G F Sbjct: 61 VLPSGAQLGLGVRTAAIYRIGAQGDLSQTQNSFDLAIRGNGYFPVQMPTGETAYTRAGSF 120 Query: 107 KVTDDGSLVSASGKYP-VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 ++D G +V+A G + + + V K + + + + L + Sbjct: 121 GLSDAGMIVTADGFQVGAGIVIPAGARDVTINATGEVLVKIDGQAALQNVGQLQLGTFPN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLS-----GVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ + + V +G+LE SN N + E+ +I + + Sbjct: 181 EGGLEAIGDNMFLETPASGGVTLGNPGAAGYGQVLQGYLETSNVNVVQEITALITAQRAY 240 Query: 221 NSITTLIDENEKSMLEA 237 + +I +++ + Sbjct: 241 EMNSKVITASDEMLSTL 257 >gi|27380939|ref|NP_772468.1| flagellar basal body rod protein FlgG [Bradyrhizobium japonicum USDA 110] gi|27354105|dbj|BAC51093.1| flagellar basal-body rod protein [Bradyrhizobium japonicum USDA 110] Length = 262 Score = 156 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 46/258 (17%), Positives = 88/258 (34%), Gaps = 21/258 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55 + + A E + +++N++N T GF+ F +++ + + Sbjct: 1 MQALHTAATGMAAQELNVQVISNNIANLRTTGFKKQTAAFQDLIYEHVRRVGAQASDQGT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 V + S G+ TG +LD A+ G+ +F + P G TRDG F Sbjct: 61 IVPVGVDIGGGVKTVGTPRSMTQGTLSQTGNDLDLAISGEGFFKILMPDGTFQYTRDGTF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165 ++ + G +V+A G + S V +GL Sbjct: 121 QMDNQGRVVTAQGNPVQPTITIPNNASGLTVNEQGQVSVTLPGSSTSAVQGQLGLTRFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G N+ + P +D + +G LE +N + + EM +I + + Sbjct: 181 KAGLQPVGNNQFTETPSSGPPQDGTANTEGYGKITQGSLEQANVDVVSEMSDLIAAQRAY 240 Query: 221 NSITTLIDENEKSMLEAI 238 +I ++ M Sbjct: 241 EMNAKVISAADQMMQSTT 258 >gi|320107042|ref|YP_004182632.1| flagellar basal-body rod protein FlgG [Terriglobus saanensis SP1PR4] gi|319925563|gb|ADV82638.1| flagellar basal-body rod protein FlgG [Terriglobus saanensis SP1PR4] Length = 262 Score = 156 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 51/257 (19%), Positives = 95/257 (36%), Gaps = 20/257 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG------------AI 48 M + + A + L T+A+N++N+ T GFR +++F ++V Sbjct: 1 MIRALYTAASGMSAQQANLDTIANNLANSATSGFRRRRLQFEDMVYQNLVTPGSAETTQT 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFK 107 + Q S + G F TG + D A++G +F + P G TR G F Sbjct: 61 TSAGLQIGLGTKSVASEVIMTQGDFNQTGNQYDLAIQGQGFFQVIRPDGTLAYTRAGSFP 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQKGKVIATMGLYSVDMS 166 G L + +G ++ + V S G + T+ L + Sbjct: 121 PNGQGQLATVNGDLLTPAISIPANATSVTISAYGVVTAAVPGSTTGTQLGTIQLATFPNP 180 Query: 167 QGFVRRENSGISPN------IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + P I P + T+++ +LE+SN + + E QM+ + + Sbjct: 181 GGLNSLGGNLFQPTLASGNAITDLPGGNSGMGTLQQTYLENSNVDVVEEFVQMVMAQRAY 240 Query: 221 NSITTLIDENEKSMLEA 237 S + +I + + Sbjct: 241 ESNSKVIHVADDMYSQI 257 >gi|297531535|ref|YP_003672810.1| fagellar hook-basal body protein [Geobacillus sp. C56-T3] gi|297254787|gb|ADI28233.1| fagellar hook-basal body protein [Geobacillus sp. C56-T3] Length = 276 Score = 156 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 58/276 (21%), Positives = 107/276 (38%), Gaps = 37/276 (13%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51 M + LA E+R+ + +N++N +T G++ F E++ + D Sbjct: 1 MLRGLYTAASGMLAQERRVDWLTNNLANAETPGYKADAAAMRAFPELLMSRLEDQPIPTA 60 Query: 52 ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFAL-------------EGDA 88 I ++ V + + G TG D AL G Sbjct: 61 SRRAIPTQTVIGPLVTGVYMQELIPNFRQGDVKETGLATDIALVDGQVPVDRASRQRGAL 120 Query: 89 WFALESPRGI-ILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGE 147 +FA+ + +G TR+G F ++ DG L + G Y + + +IP E F+V + G Sbjct: 121 FFAVANGQGEVRYTRNGHFTLSPDGYLTTQEGWYVL---DANGERIPLSSERFSVRDDGT 177 Query: 148 ISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-TVKRGFLEDSNANS 206 I + +G+ Q V+ N P P + TVK+ FLE SN + Sbjct: 178 IIDENGTATRLGVAFAANPQTLVKEGNGLFRSTTGPLPQAPGNVTYTVKQRFLERSNVDI 237 Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 M ++ + F + ++ ++S+ +A+ + Sbjct: 238 ERTMTDLLAAYRTFEANQKIVQAYDRSLDKAVNEVG 273 >gi|115523168|ref|YP_780079.1| flagellar basal body rod protein FlgF [Rhodopseudomonas palustris BisA53] gi|115517115|gb|ABJ05099.1| flagellar basal body rod protein [Rhodopseudomonas palustris BisA53] Length = 243 Score = 156 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 80/242 (33%), Positives = 130/242 (53%), Gaps = 4/242 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 MQ++ + L+AQ++LE+RL T+A+NM+N T FR VKF + N + ++F Sbjct: 1 MQSALYVSLSAQVSLEKRLETIANNMANMKTAAFRADAVKFETAMS---NAASKPVAFST 57 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 G ++S++ GS TG LD A+ G+AW P G + TRDGR ++ +G L + +G Sbjct: 58 PGDNFISRKAGSVTQTGNNLDVAVVGNAWIGFTGPNGAVYTRDGRMQINANGELQTVTGY 117 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 PVLD PI + + G ISQ + +GL+ + R NSG+ P+ Sbjct: 118 -PVLDAGGTPILVDPDAGPLIIARNGIISQGTNQVGVLGLFDIPADAKLERFGNSGVVPD 176 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 T + D G ++GF+E SN + + E+ QM+ + F +++LI+ +E +M AIR Sbjct: 177 RAATAVVDFVGAGFQQGFVEGSNVDPLLELTQMMTAQRAFQGVSSLIEGSEGTMQNAIRT 236 Query: 241 IA 242 + Sbjct: 237 LG 238 >gi|261420741|ref|YP_003254423.1| fagellar hook-basal body protein [Geobacillus sp. Y412MC61] gi|319768411|ref|YP_004133912.1| flagellar hook-basal body protein [Geobacillus sp. Y412MC52] gi|261377198|gb|ACX79941.1| fagellar hook-basal body protein [Geobacillus sp. Y412MC61] gi|317113277|gb|ADU95769.1| flagellar hook-basal body protein [Geobacillus sp. Y412MC52] Length = 276 Score = 155 bits (392), Expect = 4e-36, Method: Composition-based stats. Identities = 58/276 (21%), Positives = 107/276 (38%), Gaps = 37/276 (13%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51 M + LA E+R+ + +N++N +T G++ F E++ + D Sbjct: 1 MLRGLYTAASGMLAQERRVDWLTNNLANAETPGYKADAAAMRAFPELLMSRLEDQPIPTA 60 Query: 52 ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFAL-------------EGDA 88 I ++ V + + G TG D AL G Sbjct: 61 SRRAIPTQTVIGPLVTGVYMQELIPNFRQGDVKETGLATDIALVDGQVPVDRASGQRGAL 120 Query: 89 WFALESPRGI-ILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGE 147 +FA+ + +G TR+G F ++ DG L + G Y + + +IP E F+V + G Sbjct: 121 FFAVANGQGEVRYTRNGHFTLSPDGYLTTQEGWYVL---DANGERIPLSSERFSVRDDGT 177 Query: 148 ISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-TVKRGFLEDSNANS 206 I + +G+ Q V+ N P P + TVK+ FLE SN + Sbjct: 178 IIDENGTATRLGVAFAANPQTLVKEGNGLFRSTTGPLPQAPGNVTYTVKQRFLERSNVDI 237 Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 M ++ + F + ++ ++S+ +A+ + Sbjct: 238 ERTMTDLLAAYRTFEANQKIVQAYDRSLDKAVNEVG 273 >gi|260893854|ref|YP_003239951.1| fagellar hook-basal body protein [Ammonifex degensii KC4] gi|260865995|gb|ACX53101.1| fagellar hook-basal body protein [Ammonifex degensii KC4] Length = 260 Score = 155 bits (392), Expect = 4e-36, Method: Composition-based stats. Identities = 47/259 (18%), Positives = 97/259 (37%), Gaps = 23/259 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIK---VKFSEVV-----GAIKNDI 52 M I + + L A+N++N T GF+ + F+EV+ I Sbjct: 1 MIRGIYIAASGLNLQQALLDVTANNLANLSTPGFKQDRLTATTFAEVLLYRLEREGITAI 60 Query: 53 DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDG 112 + Y G+ + TG D AL G+ + ++P+GI R G V +G Sbjct: 61 GTTNYGTLPERSYTDFTQGALVETGNYRDVALVGEGFLVADTPQGIRYFRSGTLFVDREG 120 Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ----- 167 L +A+G + + I +E F + G + G+ + + + + Q Sbjct: 121 YLTTATGDRVLGEGRRP---IQVGEESFTILPDGTVEVAGRTVGRLLVVRIINPQQREGE 177 Query: 168 ------GFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221 G + +E + + + V++G+LE +N + EM ++ + + Sbjct: 178 LPIWDSGILAKEGRNYYRLVGGSEAPAVG-TLVRQGWLEAANVDLAGEMARLCTCLRAYQ 236 Query: 222 SITTLIDENEKSMLEAIRN 240 + + +++ + I Sbjct: 237 LASRALKTHDELLNRIINQ 255 >gi|167645397|ref|YP_001683060.1| flagellar basal body rod protein [Caulobacter sp. K31] gi|167347827|gb|ABZ70562.1| flagellar basal body rod protein [Caulobacter sp. K31] Length = 245 Score = 155 bits (392), Expect = 4e-36, Method: Composition-based stats. Identities = 53/244 (21%), Positives = 106/244 (43%), Gaps = 4/244 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN--DIDQKISF 58 M + +GL+ Q+ L + L VA+N++N +T GF+ ++ + F Sbjct: 1 MDNALYVGLSRQMTLRRELDIVANNIANANTTGFKVEQLMVRTEPAKPARTVGGSYPVKF 60 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSAS 118 V G+ TG D A+EG +F + + G TRDGRF ++ +G L++ + Sbjct: 61 VLDDGVARDFSQGALTQTGGAFDLAIEGQGFFKVSTAGGERYTRDGRFTMSPEGKLITQN 120 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178 G LD I + + G +SQ + + +G+ F + ++ Sbjct: 121 GASV-LDEGGGEIIVDPLKGPATIARDGTVSQGAERLGKIGVVRPTDLAAFRKDGDNLYR 179 Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 TP + + + +G LE SN S+ ++ ++I + + + S+ ++D+ + A+ Sbjct: 180 NTTNDTP-QPATNAAIHQGMLEASNVESIKQITKLIEVNRAYESVAKMMDQTTELSRSAV 238 Query: 239 RNIA 242 + Sbjct: 239 ERMG 242 >gi|117926380|ref|YP_866997.1| flagellar basal body rod protein [Magnetococcus sp. MC-1] gi|117610136|gb|ABK45591.1| flagellar basal body rod protein [Magnetococcus sp. MC-1] Length = 269 Score = 155 bits (392), Expect = 4e-36, Method: Composition-based stats. Identities = 58/269 (21%), Positives = 107/269 (39%), Gaps = 31/269 (11%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS--- 57 M + + E RLST+A+N++N +T G++ ++ F + + ++ + Sbjct: 1 MDSGVYAAVNGARRTELRLSTLANNLANVNTTGYKEDRLTFESFMTSPGPELHPLPTDDF 60 Query: 58 ------------------------FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE 93 + + + + + G+ T L A+EG+ +F L Sbjct: 61 MGMRGPGDIPFPFSNPSSNAYRMTYPVAFETEVDVQQGALHGTNNPLHVAIEGEGFFVLN 120 Query: 94 SPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK 153 P G TRDG F+V + G LVS G + I D N+ G ++ G+ Sbjct: 121 GPDGRRYTRDGSFEVNNVGELVSKDGYQVLGPGGEP---IVVGDGPVNIAPDGFVTSNGE 177 Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQM 213 + T+ + Q +N +P P++ + V +GFLE SN+N + M QM Sbjct: 178 EVGTIARVKLPSEQLDKVGQNQYKAPQDLEVPVD-AAQAQVHQGFLEGSNSNPIRAMTQM 236 Query: 214 IHLTQKFNSITTLIDENEKSMLEAIRNIA 242 I + + +I + +A+ I Sbjct: 237 IEAQRAYEMHIKMIQNLDNLDDQAVNRIG 265 >gi|315497881|ref|YP_004086685.1| flagellar basal-body rod protein flgg [Asticcacaulis excentricus CB 48] gi|315415893|gb|ADU12534.1| flagellar basal-body rod protein FlgG [Asticcacaulis excentricus CB 48] Length = 262 Score = 155 bits (392), Expect = 4e-36, Method: Composition-based stats. Identities = 43/254 (16%), Positives = 86/254 (33%), Gaps = 21/254 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + A + + T++ N++N +TVGF+ + +F +++ + Sbjct: 1 MRALRTATTGMSAQQLNVDTISHNIANMNTVGFKKQRAEFQDLLYQNVERMGAQSSESGT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q V +G Y GS T D ++G +F + P TR G F Sbjct: 61 VVPTGIQVGGGVKTGSVYRILTQGSATRTDNPYDIMVDGRGYFQVLMPSGETAYTRAGNF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 V D G LV+ G + V + VI + + S Sbjct: 121 AVNDQGQLVTDDGYLVQPQITFPQDTKEVTISKTGQVSVTQDGVTAPTVIGQLQVASFFN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ + T+ +G+ E SN +++ E+ +I + + Sbjct: 181 EAGLEAIGDNLYLQSGASGAPNIGTPGDVGYGTLMQGYTEASNVDAVSEITSLIVAQRAY 240 Query: 221 NSITTLIDENEKSM 234 + +I ++ + Sbjct: 241 EMNSKIIKTADEML 254 >gi|295697724|ref|YP_003590962.1| fagellar hook-basal body protein [Bacillus tusciae DSM 2912] gi|295413326|gb|ADG07818.1| fagellar hook-basal body protein [Bacillus tusciae DSM 2912] Length = 273 Score = 155 bits (392), Expect = 4e-36, Method: Composition-based stats. Identities = 44/269 (16%), Positives = 82/269 (30%), Gaps = 27/269 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKN------- 50 M I + +A ++R VA+N+ N T G++ + F ++ Sbjct: 1 MIRGLYIAASGMIAQQRREEIVANNLVNASTPGYKQDEPSLRTFGDLFLRRLGSPASGTA 60 Query: 51 -----DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA------------WFALE 93 + G + T DFAL + Sbjct: 61 LPLAPGVGPLNLGATMEDAPPRFTPGPLVETKRNQDFALIDPPGRQSRPGGVEAFFAVEG 120 Query: 94 SPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK 153 I+LTRDG+F +G L + G + + + + G G Sbjct: 121 PNGQILLTRDGQFIEGPNGQLYTGDGYRVLAAGPNGQVIPGSSVALDASGAVHTYDGTGA 180 Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQM 213 + ++ S V++GFLE SN + M QM Sbjct: 181 EVFGGLAVLDAPVAALQKQGTGVYVLTPGAAGGLVPSLAQVRQGFLEQSNVDPGQTMVQM 240 Query: 214 IHLTQKFNSITTLIDENEKSMLEAIRNIA 242 I + + + + +I ++SM + + + Sbjct: 241 IDVVRAYEANQKVIRTVDQSMDKLVNQVG 269 >gi|288962678|ref|YP_003452972.1| flagellar basal-body rod protein [Azospirillum sp. B510] gi|288914944|dbj|BAI76428.1| flagellar basal-body rod protein [Azospirillum sp. B510] Length = 261 Score = 155 bits (392), Expect = 4e-36, Method: Composition-based stats. Identities = 39/259 (15%), Positives = 94/259 (36%), Gaps = 21/259 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55 +I +A + + +++N++N +T ++ + +F +++ + + Sbjct: 1 MRVLSIASTGMMAQQLNVEVISNNIANINTTAYKRSRAEFQDLMYQAEKRQGSQSTDSGT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP-RGIILTRDGRF 106 V G+ STG ELD A+EG +F + P + TR G F Sbjct: 61 IVPTGVEVGLGVRPTSVNRINTTGNLTSTGNELDLAIEGRGYFNVTQPGGETVYTRAGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVP-IQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 K++ +G++V+A G + + + V + + + + Sbjct: 121 KLSPEGTIVTADGFTVAPGITVPQGTREVVINRSGEVLAYVDGKTQPVNQGQLAMTVFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ ++ T+++ +LE SN N + E+ ++I + + Sbjct: 181 ESGLEALGDNLFRATPASGEPQEGLAGQAGFGTIRQKYLESSNVNVVQEITELISAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 +I+ ++ Sbjct: 241 EMNAKVIEAGDQMASTMTN 259 >gi|90423017|ref|YP_531387.1| flagellar basal body rod protein FlgG [Rhodopseudomonas palustris BisB18] gi|90105031|gb|ABD87068.1| Flagellar basal-body rod FlgG [Rhodopseudomonas palustris BisB18] Length = 262 Score = 155 bits (392), Expect = 4e-36, Method: Composition-based stats. Identities = 39/259 (15%), Positives = 88/259 (33%), Gaps = 21/259 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55 + A E + +++N++N T GF+ + F +++ + + Sbjct: 1 MRALYTAATGMAAQELNVQVISNNIANMRTTGFKKQRAAFQDLIYDHVRRVGAQASDQGT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 V + G+ +TG +LD A+ G+ +F ++ P G TRDG F Sbjct: 61 ILPVGVDIGGGVKTVGTPRLMTQGTLSTTGNDLDLAVRGEGFFKIQMPDGTYSYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 + G +V+++G + V S V+ + L Sbjct: 121 TTDNTGRVVTSNGNPLQPTITIPTGASGITIASNGQVSVTVTGSTTPTVLGQISLTRFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + ++ P +D +++ LE +N + E+ +I + + Sbjct: 181 KTGLQPQGDNLFIETGASGPPQDGIANADGYGDIQQQTLEQANVEVVTEISDLIAAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 ++ ++ + Sbjct: 241 EMNAKVVSAADQMLQSTSN 259 >gi|238927618|ref|ZP_04659378.1| possible flagellar basal-body rod protein [Selenomonas flueggei ATCC 43531] gi|238884543|gb|EEQ48181.1| possible flagellar basal-body rod protein [Selenomonas flueggei ATCC 43531] Length = 266 Score = 155 bits (392), Expect = 4e-36, Method: Composition-based stats. Identities = 52/266 (19%), Positives = 105/266 (39%), Gaps = 27/266 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51 M I + + + +A+N++N T GF+ + +F ++ ND Sbjct: 1 MWRGLYIAASGMITETKHTDMIANNLANAATTGFKRDDMAIREFEPMLLRRINDHSADTD 60 Query: 52 ---------------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR 96 + A + G+ +TG DF + G +F +++P+ Sbjct: 61 VTSFKGFRLRSGAPIVGTLGLGSAVDEIATDHLQGALQATGNTYDFGISGQGYFVVDTPQ 120 Query: 97 GIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156 G TRDG F + G L + G+ L PI IP V G I G+ IA Sbjct: 121 GPRYTRDGSFYRSSTGQLQTVRGQAV-LSAQGQPITIPATAHHVTVSSDGRIYSDGRQIA 179 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 +G D + +++ ++ P + +++G LE SN + + EM ++I+ Sbjct: 180 QLGFVQFDEPKAVIKQGDNLYRPQQGA--QPQQATGVIEQGMLEMSNTSVVTEMVELINN 237 Query: 217 TQKFNSITTLIDENEKSMLEAIRNIA 242 + + + + + + + +A+ ++ Sbjct: 238 YRVYEAGSKAVQTQDTLLDKAVNDVG 263 >gi|254511992|ref|ZP_05124059.1| flagellar basal-body rod protein FlgG [Rhodobacteraceae bacterium KLH11] gi|221535703|gb|EEE38691.1| flagellar basal-body rod protein FlgG [Rhodobacteraceae bacterium KLH11] Length = 261 Score = 155 bits (392), Expect = 4e-36, Method: Composition-based stats. Identities = 45/259 (17%), Positives = 104/259 (40%), Gaps = 21/259 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + I A + R+ T+++N++N +T G+ T + +F+++ Sbjct: 1 MRALKIAATGMTAQQMRVETISNNLANMNTTGYNTRRAEFADLHYQQVARAGAVSASDGT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q V + E G +TG++LD A+EG + + P G TRDG Sbjct: 61 VLPTGIQLGLGVRPAAVTVQLEQGGLSATGSDLDVAIEGRGYLEVTLPNGQSAYTRDGSL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 K + +G +V++ G ++ + + V + + +G+++ + S Sbjct: 121 KRSAEGLIVTSDGFAVAPEITIPDDARSISINAAGEVYAYFDDTAEGQLLGEFTMASFSN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 ++G ++ T+++G+LEDS+ +++ E+ ++I + + Sbjct: 181 AKGLEAVGSNLFKETEASGAPVVGRPGEDGLGTLRQGYLEDSSVDAVREVTELIEAQRGY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 +I ++ M + Sbjct: 241 EMNAKVISAVDQMMGATTQ 259 >gi|83816512|ref|YP_446741.1| flagellar basal-body rod protein FlgG [Salinibacter ruber DSM 13855] gi|294508677|ref|YP_003572736.1| flagellar basal-body rod protein FlgG [Salinibacter ruber M8] gi|83757906|gb|ABC46019.1| flagellar basal-body rod protein FlgG [Salinibacter ruber DSM 13855] gi|294345006|emb|CBH25784.1| flagellar basal-body rod protein FlgG [Salinibacter ruber M8] Length = 262 Score = 155 bits (392), Expect = 4e-36, Method: Composition-based stats. Identities = 49/256 (19%), Positives = 98/256 (38%), Gaps = 19/256 (7%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID--------- 53 S A + + +A+N+SN +T G++ +V F +++ Sbjct: 4 RSLQTAALGMQAQQTSIDNIANNLSNANTTGYKRSRVVFQDLLYENVQASAEGQTDGAEP 63 Query: 54 ---QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVT 109 Q S + + GSF TG LD A+ GD +F ++ P + TRDG F ++ Sbjct: 64 AELQIGSGTTAVATVRNFSQGSFSKTGNSLDLAINGDGFFQVQQPDGSLAYTRDGTFTLS 123 Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDMSQG 168 +G++V+ +G ++ P + + V + + + + M L S G Sbjct: 124 SEGNIVTQTGLKVQPNINVPPNAVEISIDQEGTVKARLQGESEMVELGQMELARFPNSAG 183 Query: 169 FVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223 + + + V++GFLE N + EM +I + + Sbjct: 184 LRPQGGNLYEQTESSGEPFIGTPGRGGLGNVRQGFLEKGNVKVVQEMTSLIQAQRTYELN 243 Query: 224 TTLIDENEKSMLEAIR 239 + ++ +++ M A Sbjct: 244 SRMVTTSDEMMQTANN 259 >gi|327478811|gb|AEA82121.1| flagellar basal-body rod protein FlgG [Pseudomonas stutzeri DSM 4166] Length = 261 Score = 155 bits (392), Expect = 5e-36, Method: Composition-based stats. Identities = 47/260 (18%), Positives = 95/260 (36%), Gaps = 21/260 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M ++ + A ++ ++TVA+N++N +T GF++ + F ++ I+ Sbjct: 1 MNSALWVSKTGLAAQDKAMATVANNLANVNTNGFKSDRAVFEDLFYVIEKQPGAQADEIN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q S V GS +TG +D A+ G +F +E+P I T +G+F Sbjct: 61 TVPSGIQLGSGVRVAGTQKVFTEGSIQTTGQPMDLAIVGRGFFQVEAPNGDIFYTENGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQI-PQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 ++ +G +V+A G + V + + L + Sbjct: 121 QLNAEGMMVNAQGLPLNPAIEVPEGSTGFTVGSDGIVTAVLAGDTLPSELGQITLVNFTN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + +K+G LE SN + M MI + + + Sbjct: 181 PGGLEALGGNLYRETVASGEPVEGVPGEEGLGQLKQGVLEGSNVQVVEAMVAMIAIQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRN 240 + ++D M + + Sbjct: 241 EANAKVLDAASG-MQQFLNQ 259 >gi|209695760|ref|YP_002263690.1| flagellar basal body rod protein FlgG [Aliivibrio salmonicida LFI1238] gi|208009713|emb|CAQ80017.1| flagellar basal-body rod protein FlgG (distal rod protein) [Aliivibrio salmonicida LFI1238] Length = 262 Score = 155 bits (392), Expect = 5e-36, Method: Composition-based stats. Identities = 44/262 (16%), Positives = 93/262 (35%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + + A + ++T+++N++N TVGF+ + F ++ N + Sbjct: 1 MNPALWVSKTGLDAQQTNIATISNNLANASTVGFKKSRAVFEDLFYQNVNQAGAQSTQNT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 S G+ +T +D +EG +F + P G + +R+G+F Sbjct: 61 ELPTGLMLGSGSKVVATQKVFTNGNAQTTSNGMDMMIEGKGFFQITMPDGNLGYSRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG--EISQKGKVIATMGLYSVD 164 + +G++V+ YP+ VP + Q +VI + Sbjct: 121 TLNSEGAMVTTGSGYPLEPEIVVPEDAINVTVGTDGEVSVRLRGQQDNQVIGQITTVDFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + P ++ + +++ LE SN N E+ MI + Sbjct: 181 NPGGLEPVGQNLYLPTGASGDPQEGTPGLEGLGAIRQSMLEASNVNVTEELVNMIEAQRV 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + + +I +K + + Sbjct: 241 YEMNSKVISAVDKMASFVNQQL 262 >gi|306846298|ref|ZP_07478859.1| flagellar basal body rod protein FlgF [Brucella sp. BO1] gi|306273293|gb|EFM55162.1| flagellar basal body rod protein FlgF [Brucella sp. BO1] Length = 243 Score = 155 bits (391), Expect = 5e-36, Method: Composition-based stats. Identities = 80/242 (33%), Positives = 130/242 (53%), Gaps = 4/242 (1%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 S +GL++ + LE+R+ +A N++N TVGFR KF +V +D +SF + Sbjct: 3 NNSIYVGLSSLITLERRMDAIAHNVANVSTVGFRGEGTKFDTIVSDKASD---DVSFATA 59 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 GK Y+ E G I T LD A++GDAW + +P+G + +RDGR K+ G LVS +G Sbjct: 60 GKSYIRTEAGPLIKTDNPLDVAVKGDAWMSFSTPQGQVYSRDGRMKMLSTGDLVSVTGNA 119 Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 LD+ PI + + G I Q G + +GLY++ SG+ P+ Sbjct: 120 I-LDVGGEPIVLNPGGGAPRISSDGAIYQNGVQVGAIGLYTIPADADVAYAGTSGVIPSK 178 Query: 182 PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 P P+ D + V V +G +E SN ++M EM ++I +++ F + L+ + E ++ EAI+ + Sbjct: 179 PAQPVVDDNSVGVVQGMIEGSNVDAMTEMTRLISISRAFEQVNNLLSQQETTVSEAIKTL 238 Query: 242 AS 243 S Sbjct: 239 GS 240 >gi|85715052|ref|ZP_01046037.1| hypothetical protein NB311A_11787 [Nitrobacter sp. Nb-311A] gi|85698249|gb|EAQ36121.1| hypothetical protein NB311A_11787 [Nitrobacter sp. Nb-311A] Length = 262 Score = 155 bits (391), Expect = 5e-36, Method: Composition-based stats. Identities = 40/257 (15%), Positives = 87/257 (33%), Gaps = 21/257 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55 + A E + +++N++N T G++ + F +++ + + Sbjct: 1 MRALYTAATGMAAQELNVQVISNNIANLRTTGYKKQRAAFQDLIYDHVRRVGAQASAQGT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 V + G+ TG +LD A+ G+ +F + P G TRDG F Sbjct: 61 ILPVGIDLGGGVKTVGTPRQMSQGTLSQTGNDLDIAIRGEGFFKILMPDGTFQYTRDGTF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 ++ + G +V+A G + V V+ +GL Sbjct: 121 QMDNQGRIVNAQGNPVQPTITIPQNSAGITINSQGQVSVTLPGQTTPTVLGQIGLTRFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ P +D +++ LE +N + E+ +I + + Sbjct: 181 KAGLQPVGDNNFKETPASGPFQDGIANIDGFGDMQQSSLEQANVEVVSEISDLIAAQRAY 240 Query: 221 NSITTLIDENEKSMLEA 237 ++ ++ + A Sbjct: 241 EMNAKVVSAADQMLQSA 257 >gi|169831903|ref|YP_001717885.1| hypothetical protein Daud_1757 [Candidatus Desulforudis audaxviator MP104C] gi|169638747|gb|ACA60253.1| protein of unknown function DUF1078 domain protein [Candidatus Desulforudis audaxviator MP104C] Length = 310 Score = 155 bits (391), Expect = 5e-36, Method: Composition-based stats. Identities = 53/307 (17%), Positives = 98/307 (31%), Gaps = 68/307 (22%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ + R+ +A+N++N +T F+ +V F E++ Sbjct: 1 MIRSLTSGVSGLRNHQVRMDVIANNIANVNTTAFKAGRVNFQEILSQNIRGTSASTIGVD 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-----ILTRD 103 Q ++ + G+ +T LD A++G+ +F L TRD Sbjct: 61 SINPAQIGLGMSVQSIDILFGQGALTTTYRVLDMAIDGNGFFRLGKYSDEGIIEYYYTRD 120 Query: 104 GRFKVTDDGSLVSASGKYPVL------------------------------------DMA 127 G F V +DG LVS+ G + + D + Sbjct: 121 GAFYVDNDGYLVSSGGLHVLGVGQNGASWLTEDAIKTVVNRTYSVEAGFSGERIRLFDPS 180 Query: 128 SVPIQIPQKDEIFNVGEKGEISQKGKV--IATMGLYSVDMSQGFVRRENSGISPNI---- 181 V + + G I G+ A + + + + R + + Sbjct: 181 GVDPGLENNLTTLRIDPNGLIFVNGRTDRAALILIDNYGNPENLTRLGGNLYEVPLRGQN 240 Query: 182 ---------PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 P + G LE SN + E MI + F + +I +++ Sbjct: 241 AEPTPYNEGWGVPDSGGGQGRLVSGALEMSNVDLSAEFANMITTQRGFQANARVITVSDE 300 Query: 233 SMLEAIR 239 + E I Sbjct: 301 MLQELIN 307 >gi|94495409|ref|ZP_01301989.1| flagellar basal-body rod protein [Sphingomonas sp. SKA58] gi|94424797|gb|EAT09818.1| flagellar basal-body rod protein [Sphingomonas sp. SKA58] Length = 262 Score = 155 bits (391), Expect = 5e-36, Method: Composition-based stats. Identities = 44/258 (17%), Positives = 89/258 (34%), Gaps = 20/258 (7%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK-------- 55 + ++ A ++ +A+N++N +T GF+ + F + Sbjct: 5 ALHVARTGLDAQNTKMRVIANNLANVNTTGFKKDRADFETLAYQQIVQAGANSDAENKFA 64 Query: 56 -----ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVT 109 S VA G+ T LD A+EG +F ++ P I +R G F VT Sbjct: 65 TGLNLGSGVALQGTSKINSQGTLTQTSNALDMAIEGSGYFQVQQPDGSIAYSRAGNFSVT 124 Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDMSQG 168 +G++V+ G + + + + + + L S G Sbjct: 125 AEGTIVTGDGLPLIPQITVPQGATSVSIGNDGTVSATLQGESEPSQLGQIELASFMNPSG 184 Query: 169 FVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223 + + + ++ G+LE SN N + E+ MI + + Sbjct: 185 LQSIGGNLLVETAASGTPQVGVAGLEGRGVIRSGYLETSNVNIVEELVDMIETQRAYEVN 244 Query: 224 TTLIDENEKSMLEAIRNI 241 + +I ++ + +NI Sbjct: 245 SKMIKATDEMLQYVNQNI 262 >gi|218135322|ref|ZP_03464126.1| hypothetical protein BACPEC_03227 [Bacteroides pectinophilus ATCC 43243] gi|217990707|gb|EEC56718.1| hypothetical protein BACPEC_03227 [Bacteroides pectinophilus ATCC 43243] Length = 276 Score = 155 bits (391), Expect = 5e-36, Method: Composition-based stats. Identities = 43/270 (15%), Positives = 88/270 (32%), Gaps = 30/270 (11%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S + A + + T+A+N++N +T G++T +F ++ Sbjct: 5 MMRSLWTAASGMTAQQTNVDTIANNLANVNTTGYKTESAEFKTLLYQNLQTKTTTANGEN 64 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF-ALESPRGIILTRDGRFK 107 Q + G F+ + FA+ GD +F + TR+G F Sbjct: 65 KPVNAQVGLGTRNSSITSHYTQGQFLDSDNTFSFAINGDGFFGVMGDDGNTYYTRNGNFF 124 Query: 108 ----VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT------ 157 L ++ G + + + V G+ Sbjct: 125 ISPLQDGSMMLCTSDGNAVLNSEGAPITFNNMEANKITVDADGQFMYPDDTGNPAAIGIQ 184 Query: 158 MGLYSVDMSQGFVRRENSGISPNI------PPTPLEDLSGVTVKRGFLEDSNANSMYEMG 211 GLY G + ++ + + +K+G+LE SN N EM Sbjct: 185 FGLYQFTNPSGLDKTSGGLLAATDASGDALNESVDQVTKKSQLKQGYLEGSNVNVATEMV 244 Query: 212 QMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 +I + + + I+ +++ + +A + Sbjct: 245 NLITAQRAYELNSKAINASDEMLQQA-NQL 273 >gi|251772412|gb|EES52979.1| flagellar basal-body rod protein FlgG [Leptospirillum ferrodiazotrophum] Length = 261 Score = 155 bits (391), Expect = 5e-36, Method: Composition-based stats. Identities = 41/260 (15%), Positives = 79/260 (30%), Gaps = 21/260 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S + + + L + +N++N +T G++ + F +++ Sbjct: 1 MFRSLWNAASGMESQQANLDVITNNLANVNTTGYKRQRANFQDLMYQTMVPPGEASSLEG 60 Query: 54 -------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGR 105 Q GS +T LD A++G+ +F ++ P TRDG Sbjct: 61 NQVPTGLQVGMGSRLASVQKVFLQGSLRTTNNPLDVAIQGNGFFTVKLPDGRQAYTRDGT 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVD 164 F + G +V+ G + V + + L Sbjct: 121 FNIDSHGRIVTPEGLTTDPQIVVPKTAKSIHVAPDGEVTATVAGQSAPVKLGQLVLAQFI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G R N+ + ++ GFLE SN N E+ M+ + Sbjct: 181 NPAGLSSRGNNLFMETSASGKPTLSNPGVNGAGRLQSGFLEASNVNVAEELVNMVIGQRA 240 Query: 220 FNSITTLIDENEKSMLEAIR 239 + + I + + Sbjct: 241 YQMDASSIRTVNRMLGYTAT 260 >gi|262653|gb|AAB24739.1| flagellar basal body distal rod protein [Caulobacter vibrioides] Length = 262 Score = 155 bits (391), Expect = 5e-36, Method: Composition-based stats. Identities = 40/263 (15%), Positives = 90/263 (34%), Gaps = 22/263 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + + A + + +++N++N +TVGF+ + +F +++ Sbjct: 1 MQALRTAASGMAAQQLNVEVISNNIANMNTVGFKRQRAEFQDLLYQTIERAGSQSSSDGN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q V +G Y E G+ T + LD A++G + + P TR G F Sbjct: 61 IVPTGVQVGGGVKAGSVYRITEQGTPTLTDSPLDLAIQGKGYMPILLPSGETAYTRAGNF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFN-VGEKGEISQKGKVIATMGLYSVDM 165 D G +V+ G + V K + + + + + L + Sbjct: 121 STNDQGQIVTEDGYLVQPGITIPQNATDITISKSGLVQVKLDGQPQPQTVGQIQLANFLN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVTVK-----RGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ + + E SN +++ E+ +I + + Sbjct: 181 EGGLEAIGDNLFLETAASGAATLVRRASRALACCCSTDTEASNVDAVSEITALITAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNIAS 243 + +I ++ + +A + S Sbjct: 241 EMNSKVISTADQML-QATSQLRS 262 >gi|119384847|ref|YP_915903.1| flagellar basal body rod protein FlgG [Paracoccus denitrificans PD1222] gi|119374614|gb|ABL70207.1| flagellar basal-body rod protein FlgG [Paracoccus denitrificans PD1222] Length = 261 Score = 155 bits (391), Expect = 5e-36, Method: Composition-based stats. Identities = 42/259 (16%), Positives = 102/259 (39%), Gaps = 21/259 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + I + A + R+ +++N++N T G+ + +F+++ Sbjct: 1 MRALQIAASGMSAQQMRVDVISNNLANMSTTGYNARRAEFADLQYQQATRPGTLTATNGA 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q V + G+ + T +LD A+EG+ + + P GI TRDG Sbjct: 61 MVPAGVQLGLGVRPASVTVMLAQGTPVQTNGDLDIAIEGNGYLEVTLPSGISAYTRDGSL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 K + +G +V++ G V D+ + + V + + + + + L + Sbjct: 121 KRSAEGQVVTSEGYPLVPDITIPEDARSIAINADGQVFAYFDDRVEPENLGQITLANFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 +G ++ + + T++ GFLE+S+ + + E+ ++I + + Sbjct: 181 GKGLEAVGSNMFLETPASGAPQVAAPGQEGLGTIRAGFLEESSVDPVREIAELIKAQRGY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + +I ++ + ++ Sbjct: 241 ELNSKVITAADQMLGTTVQ 259 >gi|283834453|ref|ZP_06354194.1| flagellar basal-body rod protein FlgG [Citrobacter youngae ATCC 29220] gi|291070000|gb|EFE08109.1| flagellar basal-body rod protein FlgG [Citrobacter youngae ATCC 29220] Length = 261 Score = 155 bits (391), Expect = 6e-36, Method: Composition-based stats. Identities = 42/261 (16%), Positives = 88/261 (33%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + I A + +S +A+N++N +T GF+ +V F ++ + Sbjct: 1 MNAALWISKTGLSAQDAEMSAIANNIANVNTTGFKRDRVMFQDLFYQTQEAPGAMLDQNN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106 Q S V + G+ +T ++ A+ G ++ ++ I TRDG Sbjct: 61 IMPTGMQFGSGVRIVGTQKTFTEGNVETTDNTMNVAIMGQGFWQVQKANGDIAYTRDGNL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165 +V DG L +A G ++ + + L + Sbjct: 121 QVNADGVLTNAQGLPLQPEIDVPAGSTQVAFAPDGTVSAILPGDSDPTELGQLTLVNFAN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ + T++ G LE SN + + EM MI + + + Sbjct: 181 PAGLSAEGDNLYLETAASGQPTEGIPGEDGLGTLQDGALEGSNVDIVNEMVAMITVQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 ++ + + + + Sbjct: 241 EMNAKMVSAADDMLQFISQTL 261 >gi|218703527|ref|YP_002411046.1| flagellar basal body rod protein FlgG [Escherichia coli UMN026] gi|218430624|emb|CAR11490.1| Flagellar basal-body rod protein (flgG-like) (Distal rod protein) [Escherichia coli UMN026] Length = 303 Score = 155 bits (391), Expect = 6e-36, Method: Composition-based stats. Identities = 40/261 (15%), Positives = 86/261 (32%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + I A + +S +A+N++N +T GF+ +V F ++ + Sbjct: 43 MNAALWISKTGLSAQDAEMSAIANNIANVNTTGFKRDRVMFQDLFYQTQEAPGAMLDQNN 102 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106 Q S V + G+ +T ++ A+ G + ++ I TRDG Sbjct: 103 IMPTGLQFGSGVRIVGTQKTFTEGNVETTDNAMNVAIMGQGFLQVQKANGDIAYTRDGNL 162 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165 +V DG L ++ G ++ + + L + Sbjct: 163 QVNADGVLTNSQGLPLQPEIDVPAGATNVAFGEDGTVTAILPGDSDVTELGQLTLVNFAN 222 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ + T++ LE SN + + EM MI + + + Sbjct: 223 PAGLSAEGDNLYLETAASGQPTEGVPGEDGLGTLQDNALEGSNVDIVNEMVAMITVQRAY 282 Query: 221 NSITTLIDENEKSMLEAIRNI 241 ++ + + + + Sbjct: 283 EMNAKMVSAADDMLQYISQTL 303 >gi|162147478|ref|YP_001601939.1| flagellar basal body rod protein FlgG [Gluconacetobacter diazotrophicus PAl 5] gi|209545587|ref|YP_002277816.1| flagellar basal body rod protein FlgG [Gluconacetobacter diazotrophicus PAl 5] gi|161786055|emb|CAP55637.1| putative flagellar basal-body rod protein flgG [Gluconacetobacter diazotrophicus PAl 5] gi|209533264|gb|ACI53201.1| flagellar basal-body rod protein FlgG [Gluconacetobacter diazotrophicus PAl 5] Length = 262 Score = 155 bits (391), Expect = 6e-36, Method: Composition-based stats. Identities = 45/260 (17%), Positives = 98/260 (37%), Gaps = 21/260 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S +I A + T+++N++N T G++ + +F +++ + Sbjct: 1 MMPSLDIAATGMQAQTTNVDTISNNIANMTTTGYKRRRAEFQDLIYQDVRRVGTMSSDTG 60 Query: 56 ---------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGR 105 V + Y E G+ T LD A++G +F + P G TRDG Sbjct: 61 DLVPAGAQIGLGVRTAGIYRINEQGTLEQTSNALDMAIQGPGYFQVTLPSGEYAYTRDGT 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQK-DEIFNVGEKGEISQKGKVIATMGLYSVD 164 F +++DG++V+A G ++ D+ V + +V + L Sbjct: 121 FSLSEDGTIVTADGYPLSPNITLPNNAENITVDQSGQVQYTISGQTQAQVAGQIQLGIFQ 180 Query: 165 MSQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + + + +++GF+E+S+ N + E+ +I + Sbjct: 181 NENGLAAMGQNLFTQTTSSGDAILGTPQAQGYGLIQQGFIEESSVNVVTEITDLITAQRA 240 Query: 220 FNSITTLIDENEKSMLEAIR 239 + + +I +++ + Sbjct: 241 YEMNSKVITASDEMLQTLTN 260 >gi|326792665|ref|YP_004310486.1| flagellar hook-basal body protein [Clostridium lentocellum DSM 5427] gi|326543429|gb|ADZ85288.1| flagellar hook-basal body protein [Clostridium lentocellum DSM 5427] Length = 271 Score = 155 bits (390), Expect = 6e-36, Method: Composition-based stats. Identities = 45/272 (16%), Positives = 96/272 (35%), Gaps = 30/272 (11%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + + T+++NM+N +T ++ F ++ + + Sbjct: 1 MIRALYTAASGMTAQQLNVDTISNNMANVNTAAYKKETTNFKSLLYTTMGEANDPNAQTA 60 Query: 54 ----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKV 108 Q V + G TG E D AL G+ +FA+ ++ + TRDG F+ Sbjct: 61 PTVKQVGHGVRALANSRDYTNGILQETGNESDLALVGNGFFAIGQTDGSEVYTRDGSFRF 120 Query: 109 ----TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFN-------VGEKGEISQKGKVIAT 157 + + + +PVL I + + + + + +A Sbjct: 121 AMIPDEGSYALVTADGHPVLSTEGESIVVGTEIPMDKLEIGQDGNIYYLDETGLEMDVAQ 180 Query: 158 MGLYSVDMSQGFVRRENSGI------SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMG 211 + + G ++ + + L+ T++ G+LE SN EM Sbjct: 181 IRIVQFANRAGLEAVGDNLYKETPASGEPLAEVDDDGLTKTTIRTGYLEGSNVQIAQEMV 240 Query: 212 QMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 +I + + +T I + + +A + S Sbjct: 241 NLIIAQRAYEINSTAIKAADDMLGQA-NQLKS 271 >gi|56695100|ref|YP_165447.1| flagellar basal body rod protein FlgG [Ruegeria pomeroyi DSS-3] gi|56676837|gb|AAV93503.1| flagellar basal-body rod protein FlgG [Ruegeria pomeroyi DSS-3] Length = 261 Score = 155 bits (390), Expect = 6e-36, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 106/259 (40%), Gaps = 21/259 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + I A + R+ T+++N++N +T G+ + +F+++ Sbjct: 1 MRALKIAATGMSAQQMRVETISNNLANMNTTGYNARRAEFADLHYQQIARAGTVNASDGT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q V + E G+ +TG +LD A+EG +F + P G TRDG Sbjct: 61 VLPTGVQLGLGVRPAAVTVHLEQGALSATGNDLDLAIEGRGYFEVTLPSGQSAFTRDGSL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 K + +G +V++ G V ++ + + V + + +G+++ + L Sbjct: 121 KRSAEGLIVTSDGLSVVPEITIPSDARSISINAAGEVYAYFDDAAEGQLLGQVTLAGFTN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 ++G ++ + T+++G+LEDS+ +++ E+ ++I + + Sbjct: 181 AKGLEAIGSNLFKETEASGSPITGNPGEDGLGTLRQGYLEDSSVDAVREVTELIEAQRGY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 +I ++ M + Sbjct: 241 EMNAKVISAVDQMMSATTQ 259 >gi|312126441|ref|YP_003991315.1| fagellar hook-basal body protein [Caldicellulosiruptor hydrothermalis 108] gi|311776460|gb|ADQ05946.1| fagellar hook-basal body protein [Caldicellulosiruptor hydrothermalis 108] Length = 255 Score = 155 bits (390), Expect = 6e-36, Method: Composition-based stats. Identities = 51/258 (19%), Positives = 102/258 (39%), Gaps = 21/258 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVG--------AIK 49 M + + ++ + A+N+ N T GF+ F ++ + Sbjct: 1 MIRGIYTSASGMILNQKLMDITANNVGNVSTTGFKRDVAQVESFRNMLAYRIYDKPSSPD 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP-----RGIILTRDG 104 N I + G +I T L+ A+ G+ +FA+E P + I+ TR+G Sbjct: 61 NAIGYMSLGSDVSRIVSDFSQGLYIKTDEPLNLAIRGNGFFAVEMPNNQGAQQILYTRNG 120 Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 F + G LV+ G Y + + Q + E+G + Q G+ + + + Sbjct: 121 AFTLNSRGELVTLDGFYVLG---QNGRIVLQNGGQVRIDEQGNVYQDGRFVDRLRVVDFQ 177 Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224 Q + N+ + + + +G+LE SN NS+ EM MI++ + + + Sbjct: 178 DKQLLRKVGNNLFEADALSQSIPFS--GKIIQGYLEGSNVNSVQEMVNMINVLRAYEANQ 235 Query: 225 TLIDENEKSMLEAIRNIA 242 ++++ +A+ IA Sbjct: 236 KAFVIQDETLQKAVNEIA 253 >gi|170755157|ref|YP_001782254.1| flagellar basal body rod protein FlgG [Clostridium botulinum B1 str. Okra] gi|169120369|gb|ACA44205.1| flagellar basal body rod protein [Clostridium botulinum B1 str. Okra] Length = 263 Score = 155 bits (390), Expect = 6e-36, Method: Composition-based stats. Identities = 53/264 (20%), Positives = 107/264 (40%), Gaps = 24/264 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI----------KN 50 M + + +A + +L ++++N++N +TVG++ V F E+V + Sbjct: 1 MLRALWNSKSGLIAQQNKLDSISNNLANVNTVGYKREDVSFQELVQETLKRKGYPTSDRP 60 Query: 51 DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVT 109 +I A+ + + G ++TG + D A++G +F + P G R G F V Sbjct: 61 EIQTGTGVKATNWIRDTHQQGILLNTGNKTDLAIDGQGFFRVIMPDGNYAYERSGNFVVD 120 Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-----------IATM 158 +G LV +G + + I++ G + + + Sbjct: 121 RNGMLVDENGNRLEIQLQQPEGSQILNRIGEFSKNNINIAEDGSISVKDIDGINKMVGKI 180 Query: 159 GLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 +Y+ S FV + P + + V++ +GFLE+SN ++ EM +MI + Sbjct: 181 NIYNAVGSDAFVSIGRNLYIPQ-EGVNVFANNDVSILQGFLENSNVDAGKEMTEMIITQR 239 Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242 F + I ++ M + N+ Sbjct: 240 AFELSSRGIKTADE-MWGIVNNLR 262 >gi|315929129|gb|EFV08356.1| flagellar basal-body rod protein FlgG [Campylobacter jejuni subsp. jejuni 305] Length = 250 Score = 155 bits (390), Expect = 7e-36, Method: Composition-based stats. Identities = 39/250 (15%), Positives = 91/250 (36%), Gaps = 21/250 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55 S + +A + ++ ++N++N +T GF+ + +F++++ + Sbjct: 1 MRSLHTAATGMVAQQTQIDVTSNNIANVNTAGFKKSRAEFADLMYQVMKYAGTSTSATTL 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 + + + E ++ LD A+ G+ +F ++ P G I TR+G+F Sbjct: 61 SPSGIEVGVGVRPTAVTKVFTEGNLKSTSTDGLDMAIAGNGFFQIQLPDGTIGYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165 ++G++V++ G + +M Q+ I + L Sbjct: 121 TKDNEGNIVNSDGYRLLPEMTIPEGATAINVATDGTVSVMLPGEQQETQIGQVELVQFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ T++ GF+E SN + EM +I + + Sbjct: 181 PAGLHSMGDNLYLETGASGAPVAGIAGQDGLGTIRHGFIELSNVQLVEEMTDLITGQRAY 240 Query: 221 NSITTLIDEN 230 + + I + Sbjct: 241 EAGSKAITTS 250 >gi|239907793|ref|YP_002954534.1| flagellar basal-body rod protein FlgG [Desulfovibrio magneticus RS-1] gi|239797659|dbj|BAH76648.1| flagellar basal-body rod protein FlgG [Desulfovibrio magneticus RS-1] Length = 261 Score = 155 bits (390), Expect = 7e-36, Method: Composition-based stats. Identities = 52/259 (20%), Positives = 100/259 (38%), Gaps = 24/259 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF-- 58 M+ S + L+ E RL+ A+N++N +T G++ +V F + +D Sbjct: 1 MEMSMYSAVFGALSTETRLNISANNLANVNTTGYKRDRVSFEDTFYRYAHDYHMDPRGDI 60 Query: 59 --------------VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRD 103 + + G+ +TG LD A++G +F + + + TR+ Sbjct: 61 RQKQLLPRADLIAKPRLAMQQIDFAQGALTATGNPLDLAIQGPGFFKVSAGQGNSYYTRN 120 Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 G F + +G LV+ + + I + +VG G + G + + + +V Sbjct: 121 GAFHRSAEGMLVN----DQDMPVLGGGGPIQLPEGRISVGGDGAVYVDGAQVGQVDVVTV 176 Query: 164 DMSQGFVRRENSGISPNIPPTPLE---DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 ++ + P T E V +GFLE N + EM MI + F Sbjct: 177 QNPDALMKYGANLYMPQTGATVQEGVLRAGTTEVAQGFLEKPNVEVVEEMVSMIETQRTF 236 Query: 221 NSITTLIDENEKSMLEAIR 239 + ++ + + +AIR Sbjct: 237 EAYQKVMSSSNELDTKAIR 255 >gi|295400717|ref|ZP_06810694.1| fagellar hook-basal body protein [Geobacillus thermoglucosidasius C56-YS93] gi|312112591|ref|YP_003990907.1| fagellar hook-basal body protein [Geobacillus sp. Y4.1MC1] gi|294977298|gb|EFG52899.1| fagellar hook-basal body protein [Geobacillus thermoglucosidasius C56-YS93] gi|311217692|gb|ADP76296.1| fagellar hook-basal body protein [Geobacillus sp. Y4.1MC1] Length = 274 Score = 154 bits (389), Expect = 8e-36, Method: Composition-based stats. Identities = 54/274 (19%), Positives = 94/274 (34%), Gaps = 35/274 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDI----- 52 M F + +A ++R+ + +N++N +T G++ + F E+ + + Sbjct: 1 MLRGFYTAASGMMAQQRRVEMLTNNIANANTPGYKADQAALRAFPELFLSRLEETTVPTK 60 Query: 53 ------------DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA---------WFA 91 + V + G TG D AL A + Sbjct: 61 EAPRSFPFNAAVGPINTGVYMQELIPDFRQGDIKETGRPTDIALINGALPAAGGTLFFVV 120 Query: 92 LESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQK 151 I TR+G F V G L + G Y + + +I E F V G I Sbjct: 121 QNENGDIRYTRNGNFTVNPQGFLTTNDGWYVLDENGQ---RIALPSEDFTVNADGTIVAG 177 Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV---TVKRGFLEDSNANSMY 208 IA + + V+ N P + T K+GF+E SN + Sbjct: 178 NARIARINIAFAANPNTLVKEGNGLFRSEAGMLPSALNNPNVTYTFKQGFVERSNVDLNR 237 Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 M +M+ + F + ++ +KSM +A+ I Sbjct: 238 AMTEMLSAYRAFEANQKIVQAYDKSMEKAVNEIG 271 >gi|322382385|ref|ZP_08056292.1| FlgG-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153738|gb|EFX46113.1| FlgG-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 266 Score = 154 bits (389), Expect = 8e-36, Method: Composition-based stats. Identities = 44/263 (16%), Positives = 91/263 (34%), Gaps = 28/263 (10%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND------------I 52 G++ + +L + +N++N +T+GF+ +V F +++ Sbjct: 1 MYSGISGMRGFQTKLDVIGNNIANVNTIGFKGSRVMFQDLMSQTIRGATGPTDTQGGVNG 60 Query: 53 DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI---ILTRDGRFKVT 109 Q ++T + D +EGD +FA+++ LTR G FKV Sbjct: 61 QQIGLGSTVASIDTLHTNTGAMNTYVKTDMRIEGDGYFAVKTSSESDTYYLTRAGNFKVD 120 Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ----KGKVIATMGLYSVDM 165 LV+A G + + + + + I +G+ V Sbjct: 121 AQRRLVTADGMLVLNSDGDPIEFSENMTDYSFGADGTITQILKGGEKETIGQIGVVKVTN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL---------SGVTVKRGFLEDSNANSMYEMGQMIHL 216 G ++ + + T+ G LE SN + E +MI Sbjct: 181 PSGLMKVGGNLFELTPNAHDGDPGISTPKNAETGTGTLMTGSLEMSNVDLTSEFTEMIVA 240 Query: 217 TQKFNSITTLIDENEKSMLEAIR 239 + F + + +I +++ + E + Sbjct: 241 QRGFQANSRIITTSDEVLQEVVN 263 >gi|99082800|ref|YP_614954.1| flagellar basal body rod protein FlgG [Ruegeria sp. TM1040] gi|99039080|gb|ABF65692.1| Flagellar basal-body rod protein flgG [Ruegeria sp. TM1040] Length = 261 Score = 154 bits (389), Expect = 8e-36, Method: Composition-based stats. Identities = 40/259 (15%), Positives = 94/259 (36%), Gaps = 21/259 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + I A + R+ T+++N++N +T + + +F+++ + Sbjct: 1 MRALKIAATGMSAQQLRVETISNNLANMNTTAYNARRAEFADLHYQQISRAGTVNASDGT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q V + G+ TG ELD A++G+ +F + P TRDG F Sbjct: 61 VLPTGVQVGLGVRPAAVSVYLNQGALSQTGNELDLAIDGNGYFEVTLPSGETAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 K + +G +V+ G ++ V + + +++ L Sbjct: 121 KRSAEGLIVTNDGYPVSPEITVPEDAKSISINGEGEVYAYFNDTIEAELLGQFTLSGFTN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 +G + +++ +LEDS+ +++ E+ ++I + + Sbjct: 181 PKGLEAMGGNLFKQTEASGQPNTTEPGADGIGFLRQKYLEDSSVDAVREITELIEAQRGY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + +I ++ M + Sbjct: 241 EMNSKVISAVDQMMSATTQ 259 >gi|311992329|gb|ADQ26738.1| flagellar distal rod protein [Aeromonas hydrophila] Length = 261 Score = 154 bits (389), Expect = 8e-36, Method: Composition-based stats. Identities = 42/258 (16%), Positives = 92/258 (35%), Gaps = 21/258 (8%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK-------- 55 + I A + +S ++N++N TVG++ + F +++ N + Sbjct: 3 ALWISKTGLDAQQTNISVTSNNLANASTVGYKKSRAIFEDLLYQNINQPGGRSSADTERP 62 Query: 56 -----ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVT 109 + + G+ +T LD + G +F ++ P G TR+G+F + Sbjct: 63 SGLMLGAGAKVVATQKNHSQGNVQTTDNSLDLMISGRGYFEIQLPDGSAAYTRNGQFTLN 122 Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG--KVIATMGLYSVDMSQ 167 +G++V+ YP+ +P + ++ G +V+ + + Sbjct: 123 SEGTIVTPGNGYPLQPEIQIPENAQSVTIGEDGQVSVQLKGDGASQVVGQINTTDFVNAS 182 Query: 168 GFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNS 222 G + T +K+G LE SN N E+ +I + + Sbjct: 183 GLQPMGENMFVETQSSGAPVQGVAGTDGLGVIKQGMLETSNVNVTEELVNLIQAQRVYEM 242 Query: 223 ITTLIDENEKSMLEAIRN 240 + ++ + M I+ Sbjct: 243 NSKVLSAVDGMMSFLIQR 260 >gi|168699693|ref|ZP_02731970.1| flagellar basal body rod protein FlgG [Gemmata obscuriglobus UQM 2246] Length = 263 Score = 154 bits (389), Expect = 8e-36, Method: Composition-based stats. Identities = 39/259 (15%), Positives = 87/259 (33%), Gaps = 21/259 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + ++N++N +T GF+ + F +++ + Sbjct: 1 MIKALFTSATGMNVQTTAIDNTSNNIANVNTNGFKKGQADFQDLLYVSQRAPGSDAAAGL 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q S G+ ++T D A+EG+ +F + P G TRDG Sbjct: 61 QVPTGLQIGSGARVAGITKVFTPGALVNTQNPFDVAVEGEGFFQVTLPSGELRYTRDGAL 120 Query: 107 KVTDDGSLVSASGK--YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 ++ G+LV++ G P + + + + + + + V+ + L Sbjct: 121 RLNAQGNLVTSDGFLISPQVTIPTQAVSVSVGSDGTISVQNAGALNASTVLGQLTLVRFQ 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQK 219 G + + + ++GFLE SN + + E+ +I + Sbjct: 181 NPAGLSAEGRNLFAETASSGTPLIATPGQNGVGFTRQGFLERSNVDVVTELINLILAQRA 240 Query: 220 FNSITTLIDENEKSMLEAI 238 + T + + + Sbjct: 241 YEFNTRAVRTADNMLASTT 259 >gi|312115282|ref|YP_004012878.1| flagellar basal-body rod protein FlgF [Rhodomicrobium vannielii ATCC 17100] gi|311220411|gb|ADP71779.1| flagellar basal-body rod protein FlgF [Rhodomicrobium vannielii ATCC 17100] Length = 241 Score = 154 bits (389), Expect = 9e-36, Method: Composition-based stats. Identities = 79/243 (32%), Positives = 133/243 (54%), Gaps = 5/243 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 MQ+S + L+AQ+AL++RL TVA N++N +TVG+R ++KF V+ A Q +FV Sbjct: 1 MQSSLYVALSAQVALQKRLDTVAQNVANANTVGYRGTEMKFDSVLSAAD---AQMTAFVT 57 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 S +S G I TG LD AL+G W ++++P G + TRDGR ++T G LVS G Sbjct: 58 SKDGVVSLGAGGLIKTGNPLDVALKGQGWLSVQAPAGRMYTRDGRIQLTTSGMLVSMRG- 116 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 +PVLD P+Q+ + E G ++Q + + +G++ R E G + Sbjct: 117 HPVLDAGGAPMQVDPNGPTPQIAEDGTVTQNNERVGVLGVFVFGSDAKLSRVEG-GFIAD 175 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 P D + ++ G++E+SN N++ E ++I++ + F+ + I E + AI++ Sbjct: 176 KPAIAATDPAKSSMASGYVEESNVNAIKETARLIYVQRAFDEAASTIQSVESGLKSAIQS 235 Query: 241 IAS 243 + S Sbjct: 236 LGS 238 >gi|294679032|ref|YP_003579647.1| flagellar basal-body rod protein FlgF [Rhodobacter capsulatus SB 1003] gi|294477852|gb|ADE87240.1| flagellar basal-body rod protein FlgF [Rhodobacter capsulatus SB 1003] Length = 237 Score = 154 bits (389), Expect = 9e-36, Method: Composition-based stats. Identities = 72/241 (29%), Positives = 119/241 (49%), Gaps = 5/241 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + LA Q L Q + VA+NM+N +T GFR V FSE V ++ D + +S Sbjct: 1 MDNTIYAALARQSGLMQEMQVVANNMANVNTTGFRREGVVFSEYVDSLDGD-EASLSMAH 59 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + + + G+ STG +LDFA++G+ +F +E+P G LTR G F + +G LV+ G Sbjct: 60 ASGRTIDFDSGAVASTGNQLDFAIQGEGFFMIETPEGNQLTRAGSFLRSPEGELVTPEGF 119 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 LD I +P VGE G +S KG+ +A +GLY S + + + Sbjct: 120 RV-LDNGGSAIFLPADQGPIAVGEDGTLSAKGQPLAQLGLYEPQNSTSISLQAGTRFAVP 178 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 P E+ V +G +E SN + + E+ +M+ + + + T +D ++ + I Sbjct: 179 EGTVPAEN---ARVMQGAVEQSNVDPVREIARMVEVQRAYELGQTFLDREDERIRNVIST 235 Query: 241 I 241 + Sbjct: 236 L 236 >gi|85706168|ref|ZP_01037263.1| flagellar basal-body rod protein FlgF [Roseovarius sp. 217] gi|85669332|gb|EAQ24198.1| flagellar basal-body rod protein FlgF [Roseovarius sp. 217] Length = 237 Score = 154 bits (389), Expect = 9e-36, Method: Composition-based stats. Identities = 66/241 (27%), Positives = 114/241 (47%), Gaps = 6/241 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M+T+ L Q L + L VA+N++N T G+R + FSE V ++ +S Sbjct: 1 METAGYTTLTRQSGLLRELQVVANNIANAATTGYRQEGLIFSEFVKR--SEGGPSLSMAQ 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 S G TG LD A+EG+ +F +E+P G LTR G F ++ G LV+ G Sbjct: 59 GNVRMTSTVQGPLRPTGGTLDLAIEGEGFFLIETPSGERLTRAGAFTLSAQGDLVTPDGF 118 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 LD P+ +P + + G +S G+ +A +GL S +R + N Sbjct: 119 RV-LDAGGAPVFVPPDAKSIGLSPDGTLSDNGRPLAQIGLVRPIDSLDVIREDGVLFRTN 177 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 P+ED V +GFLE +N + + ++ +MI + + + + +D + ++ A+ + Sbjct: 178 GGFEPVEDG---RVLQGFLEGANVDPIGQIARMIEVQRAYEMGQSFLDSENERVMTALDS 234 Query: 241 I 241 + Sbjct: 235 L 235 >gi|292669970|ref|ZP_06603396.1| flagellar basal-body rod protein FlgG [Selenomonas noxia ATCC 43541] gi|292648382|gb|EFF66354.1| flagellar basal-body rod protein FlgG [Selenomonas noxia ATCC 43541] Length = 275 Score = 154 bits (389), Expect = 9e-36, Method: Composition-based stats. Identities = 45/274 (16%), Positives = 91/274 (33%), Gaps = 34/274 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51 M I + + + +A+N++N T G++ + +F ++ ND Sbjct: 1 MWRGLYIAASGMITETKHTDMIANNLANAATTGYKRDDMAIREFEPMLLRRINDYSADAD 60 Query: 52 ----------------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP 95 + + A + G+ +TG DF + G+ +F + +P Sbjct: 61 VTSFKGFRVDGLGAPRVGRLGLGSAVDEIATDHIQGALQTTGNTYDFGISGEGYFVVNTP 120 Query: 96 RGIILTRDGRFKVTDDGSLVSASGKYPVLD---MASVPIQIPQKDEIFNVGEKGEISQKG 152 +G TRDG +K+ D +V+ G + P V + + Sbjct: 121 QGPRYTRDGTWKLDSDRRMVTTDGYLLADGITIGENAPSDSITISGDGRVSYREAGQTQQ 180 Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSNANSM 207 + + L G + + + T+ +G LE SN + Sbjct: 181 QEAGQITLARFVNPAGLTAIGKNLFVVSDASGEAIESNPGVDGAGTLTQGTLEMSNVQIV 240 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 EM MI + + S + I ++ + E + Sbjct: 241 EEMVNMIVSQRAYESNSKAITTSDSML-EIANTL 273 >gi|302383955|ref|YP_003819778.1| flagellar basal-body rod protein FlgF [Brevundimonas subvibrioides ATCC 15264] gi|302194583|gb|ADL02155.1| flagellar basal-body rod protein FlgF [Brevundimonas subvibrioides ATCC 15264] Length = 245 Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats. Identities = 70/245 (28%), Positives = 117/245 (47%), Gaps = 6/245 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--IDQKISF 58 M+ + IGL+ Q+ L + L A+N++N +T GF+ ++ VG + + SF Sbjct: 1 MENAAYIGLSRQMTLRRELDIAANNIANAETTGFKVEQLLLGTEVGQRARNDAVRPGASF 60 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGD-AWFALESPRGIILTRDGRFKVTDDGSLVSA 117 V G+ TG LDFA++G+ A+F ++ G TRDG F + G LV+ Sbjct: 61 VLDNGVGRDFGQGALNETGRTLDFAIDGEGAFFKIQDGAGEAYTRDGAFTIDPTGQLVTK 120 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177 SG + D PI + +V E G ISQ G + T+ L D ++ G+ Sbjct: 121 SGLPVLGD--GGPIVVDPARGALSVAEDGTISQGGAALGTLSLARFDNLAVL-SKDGDGL 177 Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 N P D +GV V++G LE SN N++ E+ +I +T+ + T +I+ + + Sbjct: 178 YRNASNAPALDATGVQVRQGMLEGSNVNTLVEITNLIEITRAYERATKMIENVQDLSRRS 237 Query: 238 IRNIA 242 + + Sbjct: 238 VERLG 242 >gi|54307272|ref|YP_128292.1| putative FlgG flagellar basal-body rod protein [Photobacterium profundum SS9] gi|46911692|emb|CAG18490.1| Putative FlgG flagellar basal-body rod protein [Photobacterium profundum SS9] Length = 261 Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats. Identities = 41/255 (16%), Positives = 90/255 (35%), Gaps = 20/255 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + I A + ++ +++N++N +TVGF+ + F ++ +K Sbjct: 1 MHAALWISKTGLAAQDTQMQVISNNLANVNTVGFKQDRAVFEDLFYQMKKQPGAMTDQQN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRF 106 Q + V + G++ +T D A+ G +F +E + TR+G+F Sbjct: 61 ENPGGLQLGNGVRVVGTQKLMKTGAYQNTEQATDLAVLGSGFFQIELADGNTGYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLD-MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 +G +V+A+G + + V + + I + L + Sbjct: 121 HRNSEGMMVTAAGLPLMPNIEIPENATNFSVGTDGMVTISTADDPEPQEIGQITLANFAN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 + G + + + + LE SN N + EM MI + + Sbjct: 181 AAGLQSLGGNLFKETGASGAPIEGVGGEDGLGQISQFSLEGSNVNVVEEMVNMITTQRAY 240 Query: 221 NSITTLIDENEKSML 235 ++ ++ + Sbjct: 241 EMNAKVVSSADQMLK 255 >gi|88704304|ref|ZP_01102018.1| Flagellar basal-body rod protein flgG [Congregibacter litoralis KT71] gi|88701355|gb|EAQ98460.1| Flagellar basal-body rod protein flgG [Congregibacter litoralis KT71] Length = 243 Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats. Identities = 43/243 (17%), Positives = 88/243 (36%), Gaps = 20/243 (8%) Query: 19 LSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------------QKISFVASGKEY 65 +ST+A+N++N T GF+ + F +++ + Q + Sbjct: 1 MSTIANNLANVGTTGFKRGRAIFEDLIYQNVRQVGSQSSQDTLLPSGLQIGTGTRVVATE 60 Query: 66 LSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYPVL 124 G+ T LD A++G +F + P TRDG F++ D G +V+++G Sbjct: 61 RLFTQGNLTKTDGALDIAIQGRGFFEILLPDGNQAFTRDGSFQINDQGIVVTSAGYQLQP 120 Query: 125 DMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183 + + V + + I + L G R + + Sbjct: 121 PITVPQDALSVTIAADGTVSVQQPGTAAATQIGLVQLTDFINPAGLQARGENLFLESGAS 180 Query: 184 TPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 + + T+ +G++E SN N + E+ MI + + + I ++ + Sbjct: 181 GAPQPGNPGLNGLGTLSQGYVESSNVNVVEELVNMIETQRAYEMNSRAISTADQMLQYIS 240 Query: 239 RNI 241 N+ Sbjct: 241 NNL 243 >gi|126730135|ref|ZP_01745947.1| flagellar basal body rod protein [Sagittula stellata E-37] gi|126709515|gb|EBA08569.1| flagellar basal body rod protein [Sagittula stellata E-37] Length = 237 Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats. Identities = 63/238 (26%), Positives = 115/238 (48%), Gaps = 6/238 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M+T+ I L+ Q +L + + +A+N++N +T GFR + FSE + + D +S A Sbjct: 1 METAGYIALSRQSSLLREMQVIANNIANANTTGFRQEGMIFSEYLS--EGDRLDSVSMAA 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 S G TG+ D A+EG+ +F + +P G LTR G F + +G LV+ G Sbjct: 59 GRIHKTSFAQGELEPTGSAYDLAIEGEGFFLVGTPNGERLTRAGAFSPSAEGLLVTPDGN 118 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 PVLD PI +P + + G +S G+ I +G+ VR + Sbjct: 119 -PVLDGGGAPIFVPPDATDLAIAQDGTLSTGGRPIGQIGVVRPVDELAMVREGSQLFDAT 177 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 P+++ V +GF E SN +++ ++ +M+ + + + + + ++ + +AI Sbjct: 178 AGFEPVDN---PRVMQGFTEASNVDTVLQLARMVEVQRAYELGQSFSEREDERIRDAI 232 >gi|238923133|ref|YP_002936646.1| flagellar basal body and hook protein [Eubacterium rectale ATCC 33656] gi|238874805|gb|ACR74512.1| flagellar basal body and hook protein [Eubacterium rectale ATCC 33656] Length = 272 Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats. Identities = 55/269 (20%), Positives = 97/269 (36%), Gaps = 30/269 (11%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--------- 51 M + A + + T+A+N+SN +T GF+ + +F ++ Sbjct: 1 MMRALYTAATGMRAEQTNVDTIANNLSNVNTTGFKGQRTEFKSLLYQTIQTRSTSGNGDA 60 Query: 52 ---IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFK 107 Q + G ST DFALEGD +FA+ + TR+G F Sbjct: 61 KPVGAQVGLGTRVAATTSTYTQGPLNSTERPTDFALEGDGFFAVRGTDNQTYYTRNGAFT 120 Query: 108 VTDDGS---LVSASGKYPVLDMASVPIQIP-----QKDEIFNVGEKGEISQKGKVIA--- 156 + G+ +++ S PV+D I +P +K G G ++ +G I Sbjct: 121 WSQYGNGQTILTDSQGNPVMDTNGNIIAVPAGVSAEKMSFGEDGAVGYMTAQGNYINLNQ 180 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIP------PTPLEDLSGVTVKRGFLEDSNANSMYEM 210 + +Y + G ++ S ++ L V G+LE SN EM Sbjct: 181 RIAVYQFNNPSGLEKQSGSLLAATANSGNPMLEIANPALKSSKVVTGYLEGSNVQVADEM 240 Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +I + + + I + + A Sbjct: 241 VNLIVAQRAYELNSKAITTADSMLETANN 269 >gi|148554187|ref|YP_001261769.1| flagellar basal body rod protein FlgG [Sphingomonas wittichii RW1] gi|148499377|gb|ABQ67631.1| flagellar basal-body rod protein FlgG [Sphingomonas wittichii RW1] Length = 262 Score = 154 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 46/258 (17%), Positives = 89/258 (34%), Gaps = 20/258 (7%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK-------- 55 + ++ A R+ +A+N++N +T GF+ + F + Sbjct: 5 ALHVARTGLDAQNMRMQVIANNLANVNTTGFKRDRASFETLAYQAMTAPGAASSDSTKFA 64 Query: 56 -----ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVT 109 + V + G+ TG LD A++GD +F + P TRDG F + Sbjct: 65 TGTNLGTGVQINGTAKIQTQGALQETGNPLDMAIQGDGYFQVLLPDGRTGYTRDGNFNRS 124 Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQKGKVIATMGLYSVDMSQG 168 DDG++V+A G + + + + + L G Sbjct: 125 DDGTIVTADGYHLQPQIQIPENTTNLTIAADGTVSATQAGETTSTELGKIELARFSNPAG 184 Query: 169 FVRRENS-GISPNIPPTPLE----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223 N+ P T+++ LE SN N + E+ MI + + Sbjct: 185 LQAEGNNILTETPASGQPQTGPGGIDGRGTIQQSSLESSNVNIVEELVDMIETQRAYEVN 244 Query: 224 TTLIDENEKSMLEAIRNI 241 + +I ++ + +N+ Sbjct: 245 SKMISSTDQMLQYVNQNL 262 >gi|259417939|ref|ZP_05741858.1| flagellar basal-body rod protein FlgG [Silicibacter sp. TrichCH4B] gi|259346845|gb|EEW58659.1| flagellar basal-body rod protein FlgG [Silicibacter sp. TrichCH4B] Length = 261 Score = 154 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 41/259 (15%), Positives = 97/259 (37%), Gaps = 21/259 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + I A + R+ T+++N++N +T + + +F+++ + Sbjct: 1 MRALKIAATGMSAQQLRVETISNNLANMNTTAYNARRAEFADLHYQQISRAGTVNASDGT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q V + G+ TG ELD A++G+ +F + P TRDG F Sbjct: 61 VLPTGVQVGLGVRPAAVSVYLNQGALSQTGNELDVAIDGNGYFEVTLPSGETAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 K + +G +V+ G ++ V + + +++ + L Sbjct: 121 KRSAEGLIVTNDGYPVSPEITIPEDANSISINAEGEVYAYFNDTVEAELLGQLTLSGFTN 180 Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 +G ++ T+++ +LEDS+ +++ E+ ++I + + Sbjct: 181 PKGLEAVGSNLFKQTEASGQPNTTEPGADGVGTLRQKYLEDSSVDAVREITELIEAQRGY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + +I ++ M + Sbjct: 241 EMNSKVISAVDQMMSATTQ 259 >gi|91976161|ref|YP_568820.1| flagellar basal body rod protein FlgG [Rhodopseudomonas palustris BisB5] gi|91682617|gb|ABE38919.1| Flagellar basal-body rod FlgG [Rhodopseudomonas palustris BisB5] Length = 262 Score = 154 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 37/259 (14%), Positives = 88/259 (33%), Gaps = 21/259 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55 + A E + +++N++N T G++ F +++ + + Sbjct: 1 MRALYTAATGMAAQELNVQVISNNIANMRTTGYKKQTAAFQDLIYDHVRRVGAQASDQGT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 V + G+ TG +LD A+ G+ +F ++ P G +RDG F Sbjct: 61 ILPVGVDIGGGVKTVGTPRMMGQGTISPTGNDLDIAIRGEGFFKIQMPDGTFTYSRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 + G +V+++G + V S ++ +GL Sbjct: 121 TTDNTGRIVTSNGNPVQPTITIPSGASGITINAQGQVTVNVPGSTTPVLLGQIGLTRFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + ++ + P +D +++ LE +N + E+ +I + + Sbjct: 181 KTGLLPIGDNLFTETPASGPPQDGTANTDGFGDMQQKALEQANVEVVNEISDLIAAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 ++ ++ + Sbjct: 241 EMNAKVVSAADQMLQSTSN 259 >gi|120613060|ref|YP_972738.1| Fis family transcriptional regulator [Acidovorax citrulli AAC00-1] gi|120591524|gb|ABM34964.1| transcriptional regulator, Fis family [Acidovorax citrulli AAC00-1] Length = 246 Score = 154 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 53/244 (21%), Positives = 94/244 (38%), Gaps = 5/244 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + A QR + +A+N++N T GFR F V ++ D + F Sbjct: 1 MDHIIYTSMTGASAAAQRQAVLANNLANASTNGFRAEMSTFRSV--PVQGDGSKTRVFAL 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119 + G TG LD G+AWFA++ TR+G F+V +G L +++G Sbjct: 59 EATSGHVETPGPVQRTGRNLDAMAVGNAWFAVQGLDGTEAYTRNGSFEVNAEGQLRTSNG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV--DMSQGFVRRENSGI 177 + D P D G+ +G + + ++R + + Sbjct: 119 LTVLSDGGGPIDVPPGADVTLGSDGTLTARVAGQQATPIGRLKLATPTPEDPLKRGDDAL 178 Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 P+ + + G LE SN N++ M MI +++F + L+ E + A Sbjct: 179 FRTASGDPIPNDPNARLLSGALEGSNVNAVESMVGMIAASRQFEAQMRLLQTAETNDKTA 238 Query: 238 IRNI 241 + + Sbjct: 239 AQLL 242 >gi|291518270|emb|CBK73491.1| fagellar hook-basal body proteins [Butyrivibrio fibrisolvens 16/4] Length = 272 Score = 154 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 37/269 (13%), Positives = 92/269 (34%), Gaps = 30/269 (11%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M S G + + ++ T+A+N++N +T+ +++ +F ++ Sbjct: 1 MVRSLWSGASGMKGQQVQVDTIANNLANVNTMAYKSQSAQFKTLLYQTLEAESTNAQGET 60 Query: 61 SGKEYL------------SKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 + G ++ ++ + G+ +FA++ TR+G F Sbjct: 61 KPTSAQVGLGTRVASLNANFTQGPQMANDSKTAMCIIGEGFFAVQDGEETHYTRNGNFTW 120 Query: 109 ------------TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156 +D ++ +G+ L + + + + K + + Sbjct: 121 AIGPTGDKVLTTSDGYQVLDQAGRPITLPRTAGELGFAVNIDDGSCSYKDQAGNIIRTGQ 180 Query: 157 TMGLYSVDMSQGF------VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEM 210 ++ LY G + E+ I ++ + +G+LE SN N EM Sbjct: 181 SIALYQFTNRVGLNKIGENLYDESDASGEPISEWNTAGVTRSQIAQGYLEGSNVNVADEM 240 Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +I + + + I ++ + +A Sbjct: 241 VNLIIAQRAYEMNSKAITTSDTMLEQANN 269 >gi|254462012|ref|ZP_05075428.1| flagellar basal-body rod protein FlgG [Rhodobacterales bacterium HTCC2083] gi|206678601|gb|EDZ43088.1| flagellar basal-body rod protein FlgG [Rhodobacteraceae bacterium HTCC2083] Length = 261 Score = 154 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 41/259 (15%), Positives = 98/259 (37%), Gaps = 21/259 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + I A + R+ +++N++N T G+ T + +F+++ + Sbjct: 1 MRALKIAATGMSAQQMRVEVISNNLANMSTTGYNTRRAEFADLHYQQMSRAGTINASDGT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q V + GS +T ++LD A++G + + P TRDG Sbjct: 61 VLPTGVQLGLGVRPSSVSVYLAQGSLSATNSDLDVAIDGQGYLKVTMPSGASAYTRDGAL 120 Query: 107 KVTDDGSLVSASGKY-PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 K +G +V+ G + + + V + + +++ L Sbjct: 121 KRNAEGLIVTNDGYPIVPEIVIPPEARSVSINGDGEVFAYFNETAQAQLLGQFTLAGFTN 180 Query: 166 SQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 ++G ++ P + T+++G+LEDS+ +++ E+ ++I + + Sbjct: 181 AKGLEAIGSNLFMETEASGPSQVTTPGTDGLGTLRQGYLEDSSVDAVREVTELIEAQRGY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 +I ++ + A + Sbjct: 241 ELNAKVITAADQMLGAATQ 259 >gi|197104382|ref|YP_002129759.1| flagellar basal-body rod protein FlgF [Phenylobacterium zucineum HLK1] gi|196477802|gb|ACG77330.1| flagellar basal-body rod protein FlgF [Phenylobacterium zucineum HLK1] Length = 245 Score = 154 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 58/244 (23%), Positives = 115/244 (47%), Gaps = 4/244 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFR-TIKVKFSEVVGAIKN-DIDQKISF 58 M + +GL+ Q+ L + + +A+N++N DT GF+ ++ ++ + + F Sbjct: 1 MDNALYVGLSQQMVLRREMEIIANNIANLDTTGFKVESLMQKTDARAPAMTLGGPKPVKF 60 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSAS 118 V + G+ T ELDFA+EG +F L+ P G TRDGRF+ + G LV+ + Sbjct: 61 VTADGVARDFGQGALRRTDGELDFAIEGQGFFRLQGPDGERFTRDGRFRTDEIGRLVAQN 120 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178 G PV+D I I + +V G +SQ + I +G+++ + + ++ Sbjct: 121 G-SPVMDEGGGEIVIDPEKGQVSVSADGVVSQGAERIGKIGMFTFETLAALEKTGDNQYR 179 Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 P + + +++G LE SN ++ E+ +M+ +++ + +ID ++ Sbjct: 180 NTANLLP-QPAAEARLRQGMLEGSNVQAILEITRMVEVSRAYERTNRMIDSEADLSRRSV 238 Query: 239 RNIA 242 + Sbjct: 239 ERLG 242 >gi|183220929|ref|YP_001838925.1| flagellar basal-body rod protein FlgG [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911025|ref|YP_001962580.1| endoflagellar distal basal body rod protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167775701|gb|ABZ94002.1| Endoflagellar distal basal body rod protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779351|gb|ABZ97649.1| Flagellar basal-body rod protein FlgG (Distal rod protein) [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 286 Score = 154 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 44/281 (15%), Positives = 98/281 (34%), Gaps = 44/281 (15%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKF------------SEVVGAI 48 M G ++ + R+ VA+N++N D GF+ F + +G Sbjct: 1 MLRGLYTGANGMISQQVRMDVVANNLANVDKTGFKKDTTVFKTFPEMLLHRYSEDGIGKT 60 Query: 49 KND-------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA------WFALESP 95 + + + Y E G+ T D ++ +F + + Sbjct: 61 PMGSFDTSPVVGKLGFGAEVNEVYTRFEQGAVKKTDNIFDLMVQDQPGMEKPAFFTVLTN 120 Query: 96 RGIILTRDGRFKVTDDGSLVSASGKYPVLD-----MASVPIQIPQKDEIFNVGEKGEISQ 150 +G LTR G F + +G +V+ G + + + + + EI+ + G + Sbjct: 121 QGERLTRSGSFVLDKNGFVVTPQGFPLLGEKGPIQVNQGNFLVKENGEIYINAKLGTAPK 180 Query: 151 KGK-----------VIATMGLYSVDMSQGFVRRENSGIS-PNIPPTPLEDLS--GVTVKR 196 G ++ + + +V+ + + +S + P V + Sbjct: 181 DGTNFSENRFEEPVLLDKLKIRTVENPRHLDKVGDSFYADTPESGEPTAFPELLAPQVLQ 240 Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 G+LE SN + + EM MI + + + + + + + + Sbjct: 241 GYLEASNVSVVTEMVDMIEVNRAYEANSKTMQTQDSLLGRL 281 >gi|291523980|emb|CBK89567.1| fagellar hook-basal body proteins [Eubacterium rectale DSM 17629] Length = 272 Score = 154 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 55/269 (20%), Positives = 97/269 (36%), Gaps = 30/269 (11%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--------- 51 M + A + + T+A+N+SN +T GF+ + +F ++ Sbjct: 1 MMRALYTAATGMRAEQTNVDTIANNLSNVNTTGFKGQRTEFKSLLYQTIQTRSTSGNGDA 60 Query: 52 ---IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFK 107 Q + G ST DFALEGD +FA+ + TR+G F Sbjct: 61 KPVGAQVGLGTRVAATTSTYTQGPLNSTERPTDFALEGDGFFAVRGTDNQTYYTRNGAFT 120 Query: 108 VTDDGS---LVSASGKYPVLDMASVPIQIP-----QKDEIFNVGEKGEISQKGKVIA--- 156 + G+ +++ S PV+D I +P +K G G ++ +G I Sbjct: 121 WSQYGNGQTILTDSQGNPVMDTNGNIIAVPAGVSAEKMSFGEDGAVGYMTAQGNYINLNQ 180 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIP------PTPLEDLSGVTVKRGFLEDSNANSMYEM 210 + +Y + G ++ S ++ L V G+LE SN EM Sbjct: 181 RIAVYQFNNPSGLEKQSGSLLAATANSGNPMLEAANPALKSSKVVTGYLEGSNVQVADEM 240 Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +I + + + I + + A Sbjct: 241 VNLIVAQRAYELNSKAITTADSMLETANN 269 >gi|94987182|ref|YP_595115.1| flagellar basal body rod protein [Lawsonia intracellularis PHE/MN1-00] gi|94731431|emb|CAJ54794.1| Flagellar basal body rod protein [Lawsonia intracellularis PHE/MN1-00] Length = 264 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 66/262 (25%), Positives = 118/262 (45%), Gaps = 22/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-------- 52 MQ + GL A L+ E R++ +A+N++N +T G++ K+ F + + +D Sbjct: 1 MQQAKFSGLFAALSAEHRMNFIANNLANVNTAGYKQDKLAFKDTMIQFAHDQIREPIATV 60 Query: 53 --------DQKISFVASGKEYLSKEVGSFISTGTELDFALEG-DAWFALESPRGIILTRD 103 + V GS TG LDFA+ G + +F ++SP+G LTR+ Sbjct: 61 RSKPLFPEPNNAARVRIAVSNTDFAQGSMQFTGNPLDFAITGENGFFRIQSPQGNYLTRN 120 Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 G F + G LV+ G + D PI IP+ + ++ G I + T+ S+ Sbjct: 121 GSFVLDATGQLVTKQGWPVLGD--GGPITIPEGTKKISITPDGRIFADDAEVGTIQFVSL 178 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGVT---VKRGFLEDSNANSMYEMGQMIHLTQKF 220 D + + + P +E + T + +GFLE SN N + EM +MI + ++F Sbjct: 179 DDVKKLEKVGANLYRPKEGLEIIEGNANETGAIINQGFLESSNVNVVEEMVKMIEVNRQF 238 Query: 221 NSITTLIDENEKSMLEAIRNIA 242 ++ ++ ++ EA + Sbjct: 239 DAYQKVMQTSDSLDREAYSKVG 260 >gi|23099019|ref|NP_692485.1| flagellar basal body rod protein FlgG [Oceanobacillus iheyensis HTE831] gi|22777247|dbj|BAC13520.1| flagellar hook-basal body protein [Oceanobacillus iheyensis HTE831] Length = 285 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 58/282 (20%), Positives = 103/282 (36%), Gaps = 43/282 (15%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ + +L + +N++N +TVG++ V F +++ + Sbjct: 1 MLRSMYSGISGMKNSQTKLDVIGNNIANVNTVGYKKSMVNFQDMMSQTTSGAQGSTANRG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF---------------ALE 93 Q G G T LDFA+EGD F Sbjct: 61 GVNASQVGLGSTIGAISNIHTQGFQQVTNNPLDFAIEGDGMFVLVEGVDADGEGGTNIDL 120 Query: 94 SPRGIILTRDGRFKVTDDGSLVSASG----KYPVLDMASVPIQIPQKDEIFNVGEKGEIS 149 +R G F + D+G++V++ G + I IP+ + F+V G ++ Sbjct: 121 DNVNTAYSRAGNFYLDDNGNIVNSQGLYLVGFVGDPAQESTINIPESAQSFSVQSNGTVN 180 Query: 150 Q-----KGKVIATMGLYSVDMSQGFVRRENSGISPNIPP-------TPLEDLSGVTVKRG 197 +V + L S G + N+ + TP D G +V G Sbjct: 181 YIDANGDTQVAGQVALASFSNPSGLQKAGNNLYLDSPNAGLAEQLYTPESDDLGSSVVSG 240 Query: 198 FLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 LE SN + E +MI + F + T +I +++ + E + Sbjct: 241 ALEMSNVDLSEEFTEMITAQRSFQANTRIITTSDEILQELVN 282 >gi|304438314|ref|ZP_07398255.1| flagellar basal-body rod protein FlgG [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304368680|gb|EFM22364.1| flagellar basal-body rod protein FlgG [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 266 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 52/266 (19%), Positives = 106/266 (39%), Gaps = 27/266 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51 M I + + + +A+N++N T G++ + +F ++ ND Sbjct: 1 MWRGLYIAASGMITETKHTDMIANNLANAATTGYKRDDMAVREFEPMLLRRINDHAADTD 60 Query: 52 ---------------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR 96 + A + G+ +TG DF + G +F +++P+ Sbjct: 61 VTSFKGFRIRSGAAIVGTLGLGSAVDEIATDHIQGALQTTGNTYDFGISGQGYFIIDTPQ 120 Query: 97 GIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156 G TRDG F + G L + G+ L PI IP V G I G+ IA Sbjct: 121 GQRYTRDGSFYRSSTGQLQNVRGQAV-LSPQGQPITIPADARNVTVSSDGRIYANGRQIA 179 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 +G D + ++ ++ P P + + +++G LE SN + + EM ++I+ Sbjct: 180 QLGFVQFDEEKAVIKEGDNLYKPQPGAQPQQ--ATGVIEQGMLEMSNTSVVTEMVELINN 237 Query: 217 TQKFNSITTLIDENEKSMLEAIRNIA 242 + + + + + + + +A+ ++ Sbjct: 238 YRVYEAGSKAVQTQDALLDKAVNDVG 263 >gi|39936961|ref|NP_949237.1| flagellar basal body rod protein FlgG [Rhodopseudomonas palustris CGA009] gi|192292789|ref|YP_001993394.1| flagellar basal body rod protein FlgG [Rhodopseudomonas palustris TIE-1] gi|39650818|emb|CAE29341.1| putative flagellar basal-body rod protein flgg (distal rod protein) [Rhodopseudomonas palustris CGA009] gi|192286538|gb|ACF02919.1| flagellar basal-body rod protein FlgG [Rhodopseudomonas palustris TIE-1] Length = 262 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 41/259 (15%), Positives = 86/259 (33%), Gaps = 21/259 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55 + A E + +++N++N T GF+ +F +++ + + Sbjct: 1 MRALYTAATGMAAQELNVQVISNNIANMRTTGFKKQTAQFQDLIYDHVRRVGAQASDQGT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 V + G+ TG +LD A+ G+ +F ++ P G TRDG F Sbjct: 61 ILPVGVDIGGGVKTVGTPRLMTQGTLSPTGNDLDLAVRGEGFFKIQMPDGTFAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 + G +V+A+G + V S VI +GL Sbjct: 121 TKDNTGRMVTANGNPVQPTITVPNGATSITVAANGQVSVTISGSTTPTVIGQIGLTRFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + ++ +D + + LE +N + E+ +I + + Sbjct: 181 KAGLQPQGDNLFIETPASGTPQDGIASADGLGDIMQKTLEMANVEVVTEISDLISAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 ++ ++ + Sbjct: 241 EMNAKVVSSADQMLQSTSN 259 >gi|269836597|ref|YP_003318825.1| hypothetical protein Sthe_0565 [Sphaerobacter thermophilus DSM 20745] gi|269785860|gb|ACZ38003.1| protein of unknown function DUF1078 domain protein [Sphaerobacter thermophilus DSM 20745] Length = 259 Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats. Identities = 43/256 (16%), Positives = 86/256 (33%), Gaps = 17/256 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA---------IKND 51 M + + G + RL VA+N++N T GF+ +V ++ + Sbjct: 1 MTSLYATGANGLRVQQARLDAVANNVANLGTTGFKAARVDMVDMPPQPLEVARAGGAADP 60 Query: 52 IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA--WFALESPRGIILTRDGRFKVT 109 + + V G E G+ TG LD A+ G + + TRDG+F+ Sbjct: 61 VTEIGEGVTIGGISRVFEPGTPRPTGNPLDVAILGPNTFFVLTTPDGQTLYTRDGQFRPD 120 Query: 110 DDGSLVSASGKYPVLD-MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 G LV+ +G + + + + + L QG Sbjct: 121 STGQLVTPAGDRLSPPITLPPGASVTEVTPEGRILATLPGEVNPVEVGRITLARFANPQG 180 Query: 169 FVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223 + + + P + + ++ G LE S + +M +I + + Sbjct: 181 LAAAGQNRFAATVASGPPQVGTPGADGFPALQSGALEASTVDLAEQMTTLIEAQRAYTVN 240 Query: 224 TTLIDENEKSMLEAIR 239 + ++ + AI+ Sbjct: 241 ARALQTLDEMVGLAIQ 256 >gi|260762610|ref|ZP_05874944.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 2 str. 86/8/59] gi|260673033|gb|EEX59854.1| flagellar basal-body rod protein FlgG [Brucella abortus bv. 2 str. 86/8/59] Length = 243 Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats. Identities = 45/243 (18%), Positives = 85/243 (34%), Gaps = 21/243 (8%) Query: 21 TVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--------------ISFVASGKEYL 66 +A+N++N +T GF+ + +F++++ + V + Sbjct: 1 MIANNIANINTTGFKRARAEFTDLLYQSERTAGVPNQANQAIVPEGALVGLGVQTAAVRN 60 Query: 67 SKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYPVLD 125 GSF TG D AL G WF ++SP + TR G F DG LV+ G Sbjct: 61 LHIQGSFNQTGNPYDVALTGRGWFQIQSPTGETLYTRAGAFNKNADGQLVTLDGNPVEPA 120 Query: 126 MASVPIQIPQKDEIFNVGE-KGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT 184 + P I K + + + L + G + Sbjct: 121 ITIPPDAIEVTITDTGQVFAKLQDQINQVDLGQLTLANFTNEAGLEPLGGNLYRETEASG 180 Query: 185 PLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 ++K+G+LE SN + + E+ +I + + + +I ++ + Sbjct: 181 GPLVGVPGDPGYGSIKQGYLEASNVDPVKEITDLITAQRAYEMNSKVIQAADEMAATVSK 240 Query: 240 NIA 242 N+ Sbjct: 241 NLR 243 >gi|27381984|ref|NP_773513.1| flagellar basal body rod protein FlgG [Bradyrhizobium japonicum USDA 110] gi|27355154|dbj|BAC52138.1| flagellar basal-body rod protein [Bradyrhizobium japonicum USDA 110] Length = 262 Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats. Identities = 36/262 (13%), Positives = 83/262 (31%), Gaps = 21/262 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----------- 50 S I A + + +A+N++N ++ ++ + +F+++ + Sbjct: 1 MKSLAIAATGMNAQQTNIEVIANNIANINSTSYKRARAEFTDLFYQMDRMQGVANVNGSS 60 Query: 51 ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 + V S G+ TG D A+ G WF + P + TR G F Sbjct: 61 PIPEGANLGLGVKSAAIRKLHIQGALTQTGNPYDLAINGRGWFQVLGPNNEVQYTRAGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE-KGEISQKGKVIATMGLYSVDM 165 + LV+ G + + K + + I + L + Sbjct: 121 NTNANSQLVTTDGYLLDPAITIPQGTVEVTVNQTGQVFAKLDTEVNPRQIGQLNLANFAN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ + + +LE SN + + E+ ++I + + Sbjct: 181 EAGLEPLGSNLYRETTASGTPVVGLPGDAGYGKINQKYLEASNVDPVKEITELISAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNIA 242 +I +++ + + Sbjct: 241 EMNAKVIQASDEMASTVSKGLR 262 >gi|330501139|ref|YP_004378008.1| flagellar basal-body rod protein FlgG [Pseudomonas mendocina NK-01] gi|328915425|gb|AEB56256.1| flagellar basal-body rod protein FlgG [Pseudomonas mendocina NK-01] Length = 261 Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats. Identities = 47/260 (18%), Positives = 95/260 (36%), Gaps = 21/260 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M ++ + A ++ +S VA+N++N +T GF++ +V F ++ AI+ Sbjct: 1 MSSALWVSKTGLAAQDKAMSAVANNLANVNTNGFKSDRVVFEDLFYAIELQPGAQADEVN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q S V GS +TG +D A+ G +F +E+P I T +G+ Sbjct: 61 TVPSGIQLGSGVRVAGTQKVFTEGSIQTTGQPMDLAIIGAGFFQVEAPNGDIYYTENGQL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 ++ +G +V++ G + V + + L + Sbjct: 121 QLNAEGMIVNSQGLPLTPAIEVPAGSSRFTVGSDGIVTAVLAGDTLPSELGQITLVNFTN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + +K+G LE SN + M MI + + + Sbjct: 181 PGGLEALGGNLYRETVASGEPVEGVPGADGLGNLKQGVLEGSNVQVVEAMVAMISIQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRN 240 + ++D M + + Sbjct: 241 EANAKVLDAASG-MQQFLNQ 259 >gi|283780137|ref|YP_003370892.1| flagellar basal-body rod protein FlgG [Pirellula staleyi DSM 6068] gi|283438590|gb|ADB17032.1| flagellar basal-body rod protein FlgG [Pirellula staleyi DSM 6068] Length = 266 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 46/261 (17%), Positives = 95/261 (36%), Gaps = 24/261 (9%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--------- 55 +L+ +L +A+N++N +T GF+ + F ++ + + Sbjct: 6 LYTAATGMESLQTKLDVIANNLANVNTTGFKRGRANFEDLFYRQEKLPGSQDQQQNLTAT 65 Query: 56 ----ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTD 110 + G+F TG +LD A+EG + ++ P G + +R G + Sbjct: 66 GTAIGLGSRVSSVQTNFNQGAFQETGGQLDVAIEGQGFLRVQDPSGITVYSRAGNLSINA 125 Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG----KVIATMGLYSVDMS 166 G LV S + L +V + + Q G + IA + L + Sbjct: 126 QGQLVMGSAQTGRLIDPNVSFPQDTMAISITADGRVLVRQFGQQDLQQIAQIQLATFPNP 185 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFN 221 +G ++ + S + +++G LE SN + E+ +I + F Sbjct: 186 EGLLKLGENLYSQTDASGQEIVDNPGNQGIGVLRQGMLEASNVEPVQELIDLITTQRSFE 245 Query: 222 SITTLIDENEKSMLEAIRNIA 242 + I ++ + + I N+ Sbjct: 246 LNSQAIQAGDQIL-QLISNLR 265 >gi|283784086|ref|YP_003363951.1| lateral flagellar rod protein [Citrobacter rodentium ICC168] gi|282947540|emb|CBG87093.1| lateral flagellar rod protein [Citrobacter rodentium ICC168] Length = 261 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 39/261 (14%), Positives = 86/261 (32%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + I A + +S +A+N++N +T GF+ +V F ++ + Sbjct: 1 MNAALWISKTGLSAQDAEMSAIANNIANVNTTGFKRDRVMFQDLFYQTQEAPGAMLDQNN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106 Q S V + G+ +T ++ A+ G + ++ I TRDG Sbjct: 61 IMPTGMQFGSGVRIVGTQKTFTEGNVETTDNAMNVAIMGQGFLQVQKANGDIAYTRDGNL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165 ++ DG L ++ G ++ + + L + Sbjct: 121 QINADGVLTNSQGLPLQPEIDVPAGATSVAFGEDGTVTAILPGDSDPTELGQLTLVNFAN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ + T++ LE SN + + EM MI + + + Sbjct: 181 PAGLSAEGDNLYLETAASGQPTEGIPGEDGLGTLQGNALEGSNVDIVNEMVAMITVQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 ++ + + + + Sbjct: 241 EMNAKMVSAADDMLQFISQTL 261 >gi|316932823|ref|YP_004107805.1| flagellar basal-body rod protein FlgG [Rhodopseudomonas palustris DX-1] gi|315600537|gb|ADU43072.1| flagellar basal-body rod protein FlgG [Rhodopseudomonas palustris DX-1] Length = 262 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 40/259 (15%), Positives = 85/259 (32%), Gaps = 21/259 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55 + A E + +++N++N T GF+ +F +++ + + Sbjct: 1 MRALYTAATGMAAQELNVQVISNNIANMRTTGFKKQTAQFQDLIYDHVRRVGAQASDQGT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 V + G+ TG +LD A+ G+ +F ++ P G TRDG F Sbjct: 61 ILPVGVDIGGGVKTVGTPRLMTQGTLSPTGNDLDMAVRGEGFFKIQMPDGTFAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 + G +V+A G + V S V+ +GL Sbjct: 121 TTDNTGRIVTAGGNPVQPTITIPNGATSITVATNGQVSVTISGSTTPTVLGQIGLTRFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + ++ +D + + LE +N + E+ +I + + Sbjct: 181 KAGLQPQGDNLFVETPASGTPQDGIATADGLGDIMQKTLEQANVEVVTEISDLISAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 ++ ++ + Sbjct: 241 EMNAKVVSAADQMLQSTAN 259 >gi|303248240|ref|ZP_07334503.1| flagellar basal-body rod protein FlgF [Desulfovibrio fructosovorans JJ] gi|302490378|gb|EFL50289.1| flagellar basal-body rod protein FlgF [Desulfovibrio fructosovorans JJ] Length = 261 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 49/258 (18%), Positives = 92/258 (35%), Gaps = 22/258 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF-- 58 M+ S + L+ E RL+ A+N++N +T G++ +V F + +D Sbjct: 1 MEMSMLSAVFGALSTELRLNLSANNLANVNTTGYKRDRVSFEDTFLRYAHDYHMDPRGNL 60 Query: 59 --------------VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDG 104 ++ + G+ TG LD A++G +F + S TR+G Sbjct: 61 REKELLPRADLVATPRLAEQQIDFSQGALQLTGNPLDVAIQGQGFFKVASGGTTYYTRNG 120 Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 F G LV+ + + V I ++ G I G + + + V Sbjct: 121 AFHRDAQGMLVTDQNYPVIGNGGPVQI---PDGRDISIDGAGSIYVDGAQVGQIDVVRVQ 177 Query: 165 MSQGFVRRENSGISPNIPPTPLE---DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221 + + + T E V +G+LE N + EM MI + + Sbjct: 178 NPESLQKYGANLYMAQSGATVREGAVADGETRVAQGYLEKPNVQVVEEMVNMIETQRTYE 237 Query: 222 SITTLIDENEKSMLEAIR 239 + ++ ++IR Sbjct: 238 AYQKVMTNTNDLDTKSIR 255 >gi|126730134|ref|ZP_01745946.1| flagellar basal-body rod protein FlgG [Sagittula stellata E-37] gi|126709514|gb|EBA08568.1| flagellar basal-body rod protein FlgG [Sagittula stellata E-37] Length = 261 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 96/259 (37%), Gaps = 21/259 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + I A + R+ +++N+SN T G+ + +F+++ Sbjct: 1 MRALKIAATGMSAQQMRVEVISNNLSNMSTTGYNARRAEFADLHYQQMARAGTVNASNGT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 Q V + G+ +TG +LD A+EG+ + + P G TRDG Sbjct: 61 VLPTGIQLGLGVRPAAVSVQLSQGALSATGGDLDVAIEGNGYLEVTLPSGQAAYTRDGGL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 K T +G +V++ G ++ V + +++ L Sbjct: 121 KRTGEGLIVTSDGHPVAPEITIPDDARRISINADGEVYAYFAGQAQAQLLGQFTLAGFAN 180 Query: 166 SQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 ++G ++ P T+++G+LEDS+ +++ E+ +I + + Sbjct: 181 AKGLEAIGSNLFVETEASGPAIQSTPGQDGLGTLRQGYLEDSSVDAVKEITDLIEAQRGY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + +I ++ + + Sbjct: 241 ELNSKVISAADQMLGATAQ 259 >gi|291528558|emb|CBK94144.1| fagellar hook-basal body proteins [Eubacterium rectale M104/1] Length = 272 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 55/269 (20%), Positives = 97/269 (36%), Gaps = 30/269 (11%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--------- 51 M + A + + T+A+N+SN +T GF+ + +F ++ Sbjct: 1 MMRALYTAATGMRAEQTNVDTIANNLSNVNTTGFKGQRTEFKSLLYQTIQTRSTSGNGDA 60 Query: 52 ---IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFK 107 Q + G ST DFALEGD +FA+ + TR+G F Sbjct: 61 KPVGAQVGLGTRVAATTSTYTQGPLNSTERPTDFALEGDGFFAVRGTDNQTYYTRNGAFT 120 Query: 108 VTDDGS---LVSASGKYPVLDMASVPIQIP-----QKDEIFNVGEKGEISQKGKVIA--- 156 + G+ +++ S PV+D I +P +K G G ++ +G I Sbjct: 121 WSQYGNGQTILTDSQGNPVMDTNGNIIAVPAGVSAEKMSFGEDGAVGYMTAQGNYINLNQ 180 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIP------PTPLEDLSGVTVKRGFLEDSNANSMYEM 210 + +Y + G ++ S ++ L V G+LE SN EM Sbjct: 181 RIAVYQFNNPSGLEKQSGSLLAATANSGNPMLEAANPALKNSKVVTGYLEGSNVQVADEM 240 Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +I + + + I + + A Sbjct: 241 VNLIVAQRAYELNSKAITTADSMLETANN 269 >gi|238916189|ref|YP_002929706.1| flagellar basal-body rod protein FlgG [Eubacterium eligens ATCC 27750] gi|238871549|gb|ACR71259.1| flagellar basal-body rod protein FlgG [Eubacterium eligens ATCC 27750] Length = 256 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 62/256 (24%), Positives = 107/256 (41%), Gaps = 21/256 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTI---KVKFSEVVG---------AI 48 M + ++RL V++N++N T G++ F +V G I Sbjct: 1 MVKGLYTAYSGLTVQQKRLDVVSNNLANATTTGYKKEGLTTQSFKDVYGIKVKDETVGYI 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-----PRGIILTRD 103 +I G+ + S + GSF +TG DFAL G F++ + TRD Sbjct: 61 NQNIGTLNLGAKVGESFRSWDQGSFQNTGNTFDFALSGSGLFSISFTNKAGETSTLYTRD 120 Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 G F++ +G LV+ G + + + PIQ+P E V E GEI G+ + + L Sbjct: 121 GSFQMNREGYLVTKDGDFVLG--ENGPIQLPTDFESLTVEESGEIYADGQYVDRLALVDF 178 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223 + + T E + V +G+LE SN N + EM MI + + F S Sbjct: 179 EDYDYVEAYGENLYKAVDGATQTE--ATAKVNQGYLEASNINVVTEMVDMISIARDFESN 236 Query: 224 TTLIDENEKSMLEAIR 239 +++ ++ + + + Sbjct: 237 QKIMNTIDEMLGKMVS 252 >gi|254504490|ref|ZP_05116641.1| Flagella basal body rod protein [Labrenzia alexandrii DFL-11] gi|222440561|gb|EEE47240.1| Flagella basal body rod protein [Labrenzia alexandrii DFL-11] Length = 246 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 65/248 (26%), Positives = 121/248 (48%), Gaps = 12/248 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN-----DIDQK 55 M+ IGL+ Q AL +L VA+NM+N +T GF++ ++ F E + + D+ Sbjct: 1 MENVHLIGLSRQSALRNQLDVVANNMANINTTGFKSQRLLFEEYLMPVAEATEFQTPDET 60 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSL 114 +S+V + + G+F TG +LD A+EG+ +F ++ TRDG F + +G L Sbjct: 61 LSYVLDYQSITDFDTGAFKMTGNDLDLAIEGEGFFVVQMGDGTEAYTRDGAFVIDQNGQL 120 Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174 V++ G+ + PI +D + + G IS + + + + S + Q ++ + Sbjct: 121 VTSDGRPVM--TTGGPITFSAEDGSVEIAKDGTISTELGIRGVIRVASFEDPQELEKQGD 178 Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 + P P V +G LE SN +Y++ Q+I +T+ + SIT ++ + Sbjct: 179 NLYRGENPGIPQRF----NVVQGALERSNVEGVYQVTQLIEVTRAYESITKMLKDVNDLR 234 Query: 235 LEAIRNIA 242 +AI+ + Sbjct: 235 QQAIQVLG 242 >gi|296282277|ref|ZP_06860275.1| flagellar basal body rod protein FlgG [Citromicrobium bathyomarinum JL354] Length = 262 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 91/259 (35%), Gaps = 20/259 (7%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------- 55 ++ + A + R+ +A+N++N T GF+ + F+ + QK Sbjct: 4 SALQVARTGLEAQDARMRVIANNLANVGTTGFKRDRANFATLAYQDARVAGQKSSGETAY 63 Query: 56 ------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKV 108 + VA G+ +T D AL+GD +F + P TR G F Sbjct: 64 ATGLNLGTGVAVQSTSQIMTAGTLDTTNNAFDLALDGDGFFQIAMPGGRTGYTRAGNFTR 123 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDMSQ 167 + +G LV+ G ++ V + + + + Sbjct: 124 SAEGMLVTQQGFAVQPEITVPEGASAIAIAPDGTVSATINGESEPTELGQIQIARFTNPS 183 Query: 168 GFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222 G ++ ++ E + +++G LE SN N + E+ MI + + Sbjct: 184 GLQAIGDNFLAETAASGAAELGIAGEGGRGQIRQGMLEGSNVNIVEELVAMIEAQRAYEI 243 Query: 223 ITTLIDENEKSMLEAIRNI 241 + ++ ++ + A + + Sbjct: 244 SSKMVSAVDEMLRNANQTL 262 >gi|196249722|ref|ZP_03148418.1| flagellar basal body rod protein [Geobacillus sp. G11MC16] gi|196210598|gb|EDY05361.1| flagellar basal body rod protein [Geobacillus sp. G11MC16] Length = 295 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 55/276 (19%), Positives = 105/276 (38%), Gaps = 37/276 (13%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTI---KVKFSEVVG----------- 46 M + LA ++R + +N++N +T G++ F E++ Sbjct: 20 MLRGLYTAASGMLAQQRRGDWLTNNLANAETPGYKADAGAMRAFPELLMSRLEDESIPSA 79 Query: 47 -----AIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFAL-------------EGDA 88 + I + V + + + G TG D AL G Sbjct: 80 PPRAVPTQTAIGLLNTGVYTQELIPNFRQGDIKETGLSTDVALVDGQVPVDPTTGERGTL 139 Query: 89 WFALESPR-GIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGE 147 +FA+E+ + TR+G F ++ DG L + G + +I E F V + G Sbjct: 140 FFAVENGQGETRYTRNGHFTLSPDGYLTTQDGWNVL---DGNGERIAIPSESFTVRDDGT 196 Query: 148 ISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-TVKRGFLEDSNANS 206 I+ + + IA +G+ + V+ N P P + VK+GF+E SN + Sbjct: 197 ITAENRTIARLGVVFAANPKTVVKEGNGLFRSTEGPLPQAPGNVTYMVKQGFIERSNVDI 256 Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 M ++ + F + +I ++S+ +A+ + Sbjct: 257 EQTMTDLLAAYRAFEANQKIIQAYDRSLDKAVNEVG 292 >gi|149203126|ref|ZP_01880097.1| hypothetical protein RTM1035_20326 [Roseovarius sp. TM1035] gi|149143672|gb|EDM31708.1| hypothetical protein RTM1035_20326 [Roseovarius sp. TM1035] Length = 237 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 64/241 (26%), Positives = 111/241 (46%), Gaps = 6/241 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M+++ L Q L + L VA+N++N T G+R + FSE V + +S Sbjct: 1 MESAGYTTLTRQSGLLRELQVVANNIANAATTGYRQEGLIFSEFVKRTEG--GPSLSMAR 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 S G TG LD A+EGD +F +E+P G LTR G F ++ G LV+ G Sbjct: 59 GNVRMTSTLQGPLTPTGGMLDLAIEGDGFFLIETPAGERLTRAGSFTLSAQGDLVTPDGF 118 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 LD P+ IP + G +S G+ +A +GL G +R + + Sbjct: 119 RV-LDAGGAPVFIPPDASSIGLSPDGTLSDNGRPLAQIGLVRPIDRVGMIREDGVMFHAD 177 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 P+E+ + +GFLE +N + + ++ +MI + + + + +D + + A+ + Sbjct: 178 GGFEPVEEG---VIHQGFLEGANVDPIGQVARMIEVQRAYEMGQSFLDTEHERVTSALDS 234 Query: 241 I 241 + Sbjct: 235 L 235 >gi|32477362|ref|NP_870356.1| flagellar hook basal body protein flgG [Rhodopirellula baltica SH 1] gi|32447913|emb|CAD77433.1| flagellar hook basal body protein flgG [Rhodopirellula baltica SH 1] gi|327537337|gb|EGF24070.1| flagellar basal-body rod protein FlgG [Rhodopirellula baltica WH47] Length = 268 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 95/259 (36%), Gaps = 24/259 (9%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID----------- 53 A++ +L +A+N++N +T GF+ + F +++ + Sbjct: 6 LYTAATGMEAMQTKLDVIANNLANINTTGFKKDRANFEDLLYRTEVYPGVQDSTQTPTAV 65 Query: 54 --QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP--RGIILTRDGRFKVT 109 Q V + G+ TG +LD A++G +F + P + + TR G + Sbjct: 66 GTQVGLGVRVTSTQTDQRQGTLQQTGRDLDVAIQGGGYFRVVDPSSQDTMYTRAGNLDIN 125 Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV----IATMGLYSVDM 165 +G LV S + L + I + N + + Q G+ + L Sbjct: 126 ANGELVMGSAQVGRLLDPPITIPPDATAVVINSNGEVMVRQPGQTELTNQGQIQLAQFIN 185 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ + S P + + T +++G LE SN + E+ +I + F Sbjct: 186 PDGLLKNGENLYSETDASGPEQINNPGTDGMGVLRQGNLEASNVEPVQELIDLITTQRAF 245 Query: 221 NSITTLIDENEKSMLEAIR 239 + + ++ M + Sbjct: 246 ELNSQAVQAGDQVMQNISQ 264 >gi|170755952|ref|YP_001782255.1| flagellar basal body rod protein FlgG [Clostridium botulinum B1 str. Okra] gi|169121164|gb|ACA45000.1| flagellar basal body rod protein [Clostridium botulinum B1 str. Okra] Length = 255 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 53/258 (20%), Positives = 96/258 (37%), Gaps = 20/258 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKF---SEVVGAIKND------ 51 M S ++ ++LE + T++ N+SN TVG+++ + F +V+ + Sbjct: 1 MIRSLYTAVSGMISLEAKQDTISANLSNASTVGYKSTDLAFKKFEDVLMENYDKKLGNKN 60 Query: 52 ----IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107 I + G TG DFALEG +F +E+ TRDG F Sbjct: 61 IKNIIGGLSMGNKIDEVNNLFTQGIIQDTGKPTDFALEGRGFFTIENNGRNYYTRDGHFH 120 Query: 108 VTDDGSLVSASGKYPVL--DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 V G LV+ SG + I + G IS G + + + Sbjct: 121 VDTRGYLVNDSGYNVMGINRNTGAREAIFVGSKTIGTDASGNISLNGVPSYSFQVADFND 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225 + ++ N P V++ LE SN N EM M+ + F + Sbjct: 181 YNSLKKIGDNLFEGNNPQNIN-----GIVRQNSLEKSNVNVTNEMVNMLTTMRSFETNQK 235 Query: 226 LIDENEKSMLEAIRNIAS 243 ++ ++++ + + + + Sbjct: 236 IVQSIDETLGKTVNEVGA 253 >gi|163744349|ref|ZP_02151709.1| flagellar basal-body rod protein FlgG [Oceanibulbus indolifex HEL-45] gi|161381167|gb|EDQ05576.1| flagellar basal-body rod protein FlgG [Oceanibulbus indolifex HEL-45] Length = 261 Score = 153 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 39/262 (14%), Positives = 96/262 (36%), Gaps = 22/262 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + +I +A + + +++N++N +T GF+ + F +++ Sbjct: 1 MKALSIAATGMMAQQTNVDVISNNIANANTTGFKASRAAFQDLIYQSMQREGALTSEAGS 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 V + G ++T +L+ A++G +F++ P TRDG F Sbjct: 61 TRPVGIDIGMGVQTAGTVRLNTQGGMVATENQLNVAIDGRGYFSVTLPDGNQAFTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 +++ +G +V+ G + + V E + + L + Sbjct: 121 QLSPEGEIVTMQGYRVEPGLVVPENTTAVEINEQGVVMAYVENDPEPVELGQFSLTTFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 G N+ + + ++ +++G+LE SN N + ++ +I + + Sbjct: 181 EPGMRPVGNNFLLATEASGEAQVVNPGDPGAGMIRQGYLEASNVNVIQQITDLISAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNIA 242 + I+ ++ + A I Sbjct: 241 EMNSKSIETADQML-SAANQIR 261 >gi|78044159|ref|YP_359861.1| flagellar hook-basal body rod protein [Carboxydothermus hydrogenoformans Z-2901] gi|77996274|gb|ABB15173.1| flagellar hook-basal body rod protein [Carboxydothermus hydrogenoformans Z-2901] Length = 244 Score = 153 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 53/246 (21%), Positives = 100/246 (40%), Gaps = 9/246 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSE-VVGAIKNDIDQKI 56 M I A ++L TVA+N++N +TVG+R F E ++ ++ + Sbjct: 1 MLRGIYISATGLKAGLKQLDTVANNIANINTVGYRADITVNSGFEEKILNYAGKEVGKLE 60 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVS 116 V YL G ++ TG LDFAL G+ +F +E+P G+ TR G F+V DG L Sbjct: 61 YGVNPDINYLDLSSGKYVPTGRNLDFALVGNGFFVVETPAGLRYTRAGDFQVNRDGYLCL 120 Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 +G + PI+I ++ + ++ + I + + + + Sbjct: 121 PNGSRVLG--EKGPIKIDNEELYVEKDGRIYNKERSRYIDRLRVVEPVDPVALEKVGGNF 178 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 V +G+LE SN + E ++ + S + ++ + + Sbjct: 179 FVTAAN---NVRPGNALVLQGYLEQSNVDPNREYPALLESLRYLQSNARGLKVQDELLSK 235 Query: 237 AIRNIA 242 A+ ++ Sbjct: 236 AVNDLG 241 >gi|114799186|ref|YP_758987.1| flagellar basal body rod protein FlgG [Hyphomonas neptunium ATCC 15444] gi|114739360|gb|ABI77485.1| flagellar basal-body rod protein FlgG [Hyphomonas neptunium ATCC 15444] Length = 261 Score = 153 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 97/259 (37%), Gaps = 21/259 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 S I + A + R+ +++N++N T +R +FS+++ Sbjct: 1 MKSLQIAASGMAAQQMRVEVISNNIANMSTTAYRPRTAEFSDLMYQQYLTPGTITSQVGT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q S V + G+ T ELD A++G+ + + P G TRDG+ Sbjct: 61 VVPSGIQLGSGVRPTTVSMDLTQGTLRETQAELDIAIDGNGFLEVTLPSGEPAFTRDGKL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 + DG +V++ G + V + +G+ I ++ L Sbjct: 121 SRSPDGEIVTSDGFPLADGIVIPEDARRISISRDGEVVAYFDNETEGQAIGSISLVRFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 +G ++ P L T +++G++EDS + + E+ +I + + Sbjct: 181 EKGLEAMGDNMFRETEASGPANRLIPGTEGMGFLRQGYIEDSAVDVVKEIADLIEAQRGY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + +I +++ + R Sbjct: 241 ELNSKVITASDEMLSVTTR 259 >gi|319650828|ref|ZP_08004965.1| flagellar basal-body rod protein [Bacillus sp. 2_A_57_CT2] gi|317397426|gb|EFV78127.1| flagellar basal-body rod protein [Bacillus sp. 2_A_57_CT2] Length = 279 Score = 153 bits (385), Expect = 3e-35, Method: Composition-based stats. Identities = 54/279 (19%), Positives = 99/279 (35%), Gaps = 40/279 (14%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKND------ 51 M F + LA ++R + +NM+N +T GF+ + F E++ Sbjct: 1 MFRGFYTAASGMLAQQRRTEVLTNNMANANTPGFKADQTSLRAFPEMLLQRIGQKTVPTE 60 Query: 52 ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFAL-------------EGDA 88 + S V + S G TG D AL G Sbjct: 61 KGLNLPFNQEVGSLNSGVYMQETLPSFMQGDMKETGLNTDLALLDLNLPVNPDTGLSGSV 120 Query: 89 WFALE-SPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGE 147 ++ TR+G F + +G L +ASG Y + D +I + F V E G Sbjct: 121 FYTAAGIDGEQRYTRNGNFTLDGEGYLTTASGLYILDDAG---ERIQLSSDRFKVSEDGV 177 Query: 148 ISQKGKVIATMGLYSVDMSQGFVRRENSGISPN----IPPTPLEDLSGVTVKRGFLEDSN 203 I+ + A +G+ + + + + + +++G+LE SN Sbjct: 178 ITGEAGETARLGIMYAQNPESLRKEGDGLFAVTEESVLENAYNAQNVQFKLQQGYLERSN 237 Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 ++ M M+ + F + ++ ++SM +A I Sbjct: 238 VDASRTMTDMMTAYRSFEANQKVLQAYDRSMEKAANEIG 276 >gi|170021358|ref|YP_001726312.1| flagellar basal body rod protein FlgG [Escherichia coli ATCC 8739] gi|188494741|ref|ZP_03002011.1| flagellar basal-body rod protein FlgG [Escherichia coli 53638] gi|307136860|ref|ZP_07496216.1| flagellar basal body rod protein FlgG [Escherichia coli H736] gi|331640715|ref|ZP_08341862.1| flagellar basal-body rod protein FlgG [Escherichia coli H736] gi|331671806|ref|ZP_08372602.1| flagellar basal-body rod protein FlgG [Escherichia coli TA280] gi|169756286|gb|ACA78985.1| flagellar basal-body rod protein FlgG [Escherichia coli ATCC 8739] gi|188489940|gb|EDU65043.1| flagellar basal-body rod protein FlgG [Escherichia coli 53638] gi|315616825|gb|EFU97442.1| flagellar basal-body rod protein FlgG [Escherichia coli 3431] gi|323181549|gb|EFZ66969.1| flagellar basal-body rod protein FlgG [Escherichia coli 1357] gi|331040089|gb|EGI12297.1| flagellar basal-body rod protein FlgG [Escherichia coli H736] gi|331070795|gb|EGI42154.1| flagellar basal-body rod protein FlgG [Escherichia coli TA280] Length = 261 Score = 153 bits (385), Expect = 3e-35, Method: Composition-based stats. Identities = 40/261 (15%), Positives = 86/261 (32%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + I A + +S +A+N++N +T GF+ +V F ++ + Sbjct: 1 MNAALWISKTGLSAQDAEMSAIANNIANVNTTGFKRDRVMFQDLFYQTQEAPGAMLDQNN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106 Q S V + G+ +T ++ A+ G + ++ I TRDG Sbjct: 61 IMPTGLQFGSGVRIVGTQKTFTEGNVETTDNAMNVAIMGQGFLQVQKANGDIAYTRDGNL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165 +V DG L ++ G ++ + + L + Sbjct: 121 QVNADGVLTNSQGLPLQPEIDVPAGATNVAFGEDGTVTAILPGDSDATELGQLTLVNFAN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ + T++ LE SN + + EM MI + + + Sbjct: 181 PAGLSAEGDNLYLETAASGQPTEGVPGEDGLGTLQDNALEGSNVDIVNEMVAMITVQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 ++ + + + + Sbjct: 241 EMNAKMVSAADDMLQYISQTL 261 >gi|320530444|ref|ZP_08031502.1| putative flagellar basal body rod protein FlgG [Selenomonas artemidis F0399] gi|320137277|gb|EFW29201.1| putative flagellar basal body rod protein FlgG [Selenomonas artemidis F0399] Length = 266 Score = 153 bits (385), Expect = 3e-35, Method: Composition-based stats. Identities = 54/266 (20%), Positives = 107/266 (40%), Gaps = 27/266 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51 M I + + + +A+N++N GF+ + +F ++ ND Sbjct: 1 MWRGLYIAASGMITETKHTDMIANNLANASNTGFKRDDMAIREFEPMLLRRINDYTADTD 60 Query: 52 ---------------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR 96 + A + G+ +TG DFA+ G+ +F +++P+ Sbjct: 61 VTSFKGFRLGHGAPRVGMLGLGSAVDEIATDHLQGALQTTGNTYDFAISGEGYFVIDTPQ 120 Query: 97 GIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156 G TRDG F + G L + G+ L PI IP NV G I IA Sbjct: 121 GPRYTRDGSFYRSASGQLQNVRGQAV-LSAQGRPINIPADATRVNVSGDGRIYVGNTEIA 179 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 +G D +++ ++ P P + + T+++G LE SN + + EM ++I+ Sbjct: 180 QLGFVQFDAPDAVIKQGDNLYRPQEGARPTQ--ATGTIEQGLLEMSNTSIVTEMVELINN 237 Query: 217 TQKFNSITTLIDENEKSMLEAIRNIA 242 + + + + + + + +A+ ++ Sbjct: 238 YRVYEAGSRAVQTQDSLLDKAVNDVG 263 >gi|209963564|ref|YP_002296479.1| flagellar basal-body rod protein FlgF [Rhodospirillum centenum SW] gi|209957030|gb|ACI97666.1| flagellar basal-body rod protein FlgF [Rhodospirillum centenum SW] Length = 248 Score = 153 bits (385), Expect = 3e-35, Method: Composition-based stats. Identities = 69/250 (27%), Positives = 113/250 (45%), Gaps = 14/250 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M+ S + L+ Q+A+ + L A+N++N +T FR + F V K QK++FV Sbjct: 1 MENSLYVALSQQMAVRRMLDVTANNVANMNTAAFRAERPVFDAFV--EKAGKGQKVAFVI 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 Y G+ STG LD A+ GDAW ++ +P GI TRDGR DG LV+ G Sbjct: 59 DRATYTDTRDGTVASTGNPLDVAVRGDAWLSVATPDGIRYTRDGRLNRDPDGRLVTLDGY 118 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKG--------KVIATMGLYSVDMSQGFVRR 172 PVLD I +P+ + G I + + +GL + + R Sbjct: 119 -PVLDEGGGEITLPEDVGAIAITADGAIRAPAVDSENGEVEELGRLGLARLPAAGDLERD 177 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 + + + P P E T+ +G +E SN + EM +++ LT+ + +++ + Sbjct: 178 GSGLVRYDGDPLPAEG---ATLIQGAVEGSNVQPITEMVRLVELTRAYGQANRMVESEHE 234 Query: 233 SMLEAIRNIA 242 AI + Sbjct: 235 RQKTAISKLG 244 >gi|150019059|ref|YP_001311313.1| flagellar basal body rod protein FlgG [Clostridium beijerinckii NCIMB 8052] gi|149905524|gb|ABR36357.1| flagellar basal body rod protein [Clostridium beijerinckii NCIMB 8052] Length = 256 Score = 153 bits (385), Expect = 3e-35, Method: Composition-based stats. Identities = 50/255 (19%), Positives = 108/255 (42%), Gaps = 14/255 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGA---------- 47 M F ++ +AL+ V +N++N + G++ ++ F +V+ + Sbjct: 1 MIRGFYTSVSGLIALQNDQEVVTNNIANVNNTGYKKRELTKSSFEDVMISNRQKLVGDKY 60 Query: 48 IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107 +KNDI V G+F ST + DFA++G +F ++ + TRDG FK Sbjct: 61 VKNDIGNLNMGVKVNDVETVFTQGAFKSTDSMTDFAIDGRGFFVAQNGNKEVYTRDGNFK 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 + + G L++ G + S + P G+ + + + + Q Sbjct: 121 INNQGYLITNDGSQVLGINNSTGAREPIYVGDSKFSIDGDNNINIEGVGAVDKLLTADFQ 180 Query: 168 GFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 + E G + + P+ + V V++ FLE SN + E+ +++ + ++F + + Sbjct: 181 NYNNLEPIGDNYSTMDNPI-YNAKVNVRQNFLESSNVDPSTELVKLMEIKRQFETNQKFV 239 Query: 228 DENEKSMLEAIRNIA 242 ++++ +A + Sbjct: 240 KMQDETVQKAASELG 254 >gi|170680582|ref|YP_001742375.1| flagellar basal body rod protein FlgG [Escherichia coli SMS-3-5] gi|256020230|ref|ZP_05434095.1| flagellar basal body rod protein FlgG [Shigella sp. D9] gi|260853468|ref|YP_003227359.1| putative lateral flagellar component of cell-distal portion of basal-body rod [Escherichia coli O26:H11 str. 11368] gi|293403357|ref|ZP_06647448.1| flgG [Escherichia coli FVEC1412] gi|293408369|ref|ZP_06652208.1| flagellar basal-body rod protein FlgG [Escherichia coli B354] gi|298378968|ref|ZP_06988849.1| flagellar basal-body rod protein FlgG [Escherichia coli FVEC1302] gi|300900357|ref|ZP_07118533.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 198-1] gi|300936128|ref|ZP_07151067.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 21-1] gi|306813301|ref|ZP_07447494.1| flagellar basal body rod protein FlgG [Escherichia coli NC101] gi|307313517|ref|ZP_07593138.1| flagellar basal-body rod protein FlgG [Escherichia coli W] gi|331645420|ref|ZP_08346524.1| flagellar basal-body rod protein FlgG [Escherichia coli M605] gi|332281392|ref|ZP_08393805.1| lateral flagellar rod protein [Shigella sp. D9] gi|59889782|emb|CAH19138.1| Lateral flagellar rod protein (FlgG-like) [Escherichia coli] gi|170518300|gb|ACB16478.1| lateral flagellar rod protein LfgG [Escherichia coli SMS-3-5] gi|257752117|dbj|BAI23619.1| predicted lateral flagellar component of cell-distal portion of basal-body rod [Escherichia coli O26:H11 str. 11368] gi|284920046|emb|CBG33103.1| lateral flagellar rod protein (FlgG-like) [Escherichia coli 042] gi|291429210|gb|EFF02230.1| flgG [Escherichia coli FVEC1412] gi|291471547|gb|EFF14030.1| flagellar basal-body rod protein FlgG [Escherichia coli B354] gi|298280081|gb|EFI21585.1| flagellar basal-body rod protein FlgG [Escherichia coli FVEC1302] gi|300356125|gb|EFJ71995.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 198-1] gi|300458706|gb|EFK22199.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 21-1] gi|305854064|gb|EFM54503.1| flagellar basal body rod protein FlgG [Escherichia coli NC101] gi|306906685|gb|EFN37196.1| flagellar basal-body rod protein FlgG [Escherichia coli W] gi|315059544|gb|ADT73871.1| flagellar component of cell-distal portion of basal-body rod [Escherichia coli W] gi|323158101|gb|EFZ44200.1| flagellar basal-body rod protein FlgG [Escherichia coli EPECa14] gi|323171066|gb|EFZ56715.1| flagellar basal-body rod protein FlgG [Escherichia coli LT-68] gi|323191540|gb|EFZ76801.1| flagellar basal-body rod protein FlgG [Escherichia coli RN587/1] gi|323379897|gb|ADX52165.1| flagellar basal-body rod protein FlgG [Escherichia coli KO11] gi|323975928|gb|EGB71022.1| flagellar basal-body rod protein FlgG [Escherichia coli TW10509] gi|327254556|gb|EGE66172.1| flagellar basal-body rod protein FlgG [Escherichia coli STEC_7v] gi|331045582|gb|EGI17708.1| flagellar basal-body rod protein FlgG [Escherichia coli M605] gi|332103744|gb|EGJ07090.1| lateral flagellar rod protein [Shigella sp. D9] Length = 261 Score = 153 bits (385), Expect = 3e-35, Method: Composition-based stats. Identities = 40/261 (15%), Positives = 86/261 (32%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + I A + +S +A+N++N +T GF+ +V F ++ + Sbjct: 1 MNAALWISKTGLSAQDAEMSAIANNIANVNTTGFKRDRVMFQDLFYQTQEAPGAMLDQNN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106 Q S V + G+ +T ++ A+ G + ++ I TRDG Sbjct: 61 IMPTGLQFGSGVRIVGTQKTFTEGNVETTDNAMNVAIMGQGFLQVQKANGDIAYTRDGNL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165 +V DG L ++ G ++ + + L + Sbjct: 121 QVNADGVLTNSQGLPLQPEIDVPAGATNVAFGEDGTVTAILPGDSDVTELGQLTLVNFAN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ + T++ LE SN + + EM MI + + + Sbjct: 181 PAGLSAEGDNLYLETAASGQPTEGVPGEDGLGTLQDNALEGSNVDIVNEMVAMITVQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 ++ + + + + Sbjct: 241 EMNAKMVSAADDMLQYISQTL 261 >gi|260866415|ref|YP_003232817.1| putative lateral flagellar component of cell-distal portion of basal-body rod [Escherichia coli O111:H- str. 11128] gi|257762771|dbj|BAI34266.1| predicted lateral flagellar component of cell-distal portion of basal-body rod [Escherichia coli O111:H- str. 11128] gi|323178492|gb|EFZ64070.1| flagellar basal-body rod protein FlgG [Escherichia coli 1180] Length = 261 Score = 153 bits (385), Expect = 3e-35, Method: Composition-based stats. Identities = 40/261 (15%), Positives = 85/261 (32%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + I A + +S +A+N++N +T GF+ +V F ++ Sbjct: 1 MNAALWISKTGLSAQDAEMSAIANNIANVNTTGFKRDRVMFQDLFYQTLEAPGAMLDQNN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106 Q S V + G+ +T ++ A+ G + ++ I TRDG Sbjct: 61 IMPTGLQFGSGVRIVGTQKTFTEGNVETTDNAMNVAIMGQGFLQVQKANGDIAYTRDGNL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165 +V DG L ++ G ++ + + L + Sbjct: 121 QVNADGVLTNSQGLPLQPEIDVPAGATNVAFGEDGTVTAILPGDSDVTELGQLTLVNFAN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ + T++ LE SN + + EM MI + + + Sbjct: 181 PAGLSAEGDNLYLETAASGQPTEGVPGEDGLGTLQDNALEGSNVDIVNEMVAMITVQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 ++ + + + + Sbjct: 241 EMNAKMVSAADDMLQYISQTL 261 >gi|255523680|ref|ZP_05390646.1| flagellar basal body rod protein [Clostridium carboxidivorans P7] gi|255512549|gb|EET88823.1| flagellar basal body rod protein [Clostridium carboxidivorans P7] Length = 259 Score = 153 bits (385), Expect = 3e-35, Method: Composition-based stats. Identities = 51/262 (19%), Positives = 94/262 (35%), Gaps = 24/262 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGA---------- 47 M S ++ + E + + +N++N TVGF+ + F +V+ Sbjct: 1 MIRSLYTAVSGMITQEAKQDVITNNLANATTVGFKGDNLAVKKFDDVLLQNYDKIVGGKN 60 Query: 48 IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG----IILTRD 103 ++N I G+ ST DFA++G +FA++ G TRD Sbjct: 61 VRNVIGSISLGSKIDAVNTDFTQGNIESTDKATDFAIQGKGFFAVQRNNGVDNGQYYTRD 120 Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPI--QIPQKDEIFNVGEKGEISQKGKVIATMGLY 161 G F V +G LV+ SG + I G +S + Sbjct: 121 GHFHVNINGILVNDSGDTVLGRNLQNNSLGPINVGSGELKCDTSGNVSINNVPTYKLYTV 180 Query: 162 SVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221 + + ++ P + V++ LE SN N + EM M+ + F Sbjct: 181 DFNDYNTLKKVGDNLYQGTNPTE-----NAAVVRQKSLEKSNINVINEMVSMMTTMRTFE 235 Query: 222 SITTLIDENEKSMLEAIRNIAS 243 + ++ ++++ +A I S Sbjct: 236 TNQKVVQALDETLSKAANEIGS 257 >gi|225377358|ref|ZP_03754579.1| hypothetical protein ROSEINA2194_03006 [Roseburia inulinivorans DSM 16841] gi|225210783|gb|EEG93137.1| hypothetical protein ROSEINA2194_03006 [Roseburia inulinivorans DSM 16841] Length = 271 Score = 153 bits (385), Expect = 3e-35, Method: Composition-based stats. Identities = 45/268 (16%), Positives = 95/268 (35%), Gaps = 29/268 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--------- 51 M + + A + + +++N++N +T F++ K +F ++ Sbjct: 1 MMRALYTAASGMRAQQTNVDNISNNIANVNTTAFKSQKTEFKSLLYQTIQTRTTSANGEE 60 Query: 52 ---IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFK 107 Q S G+ + ++ FA+EG+ +F + + TR+G F Sbjct: 61 KPIGAQVGLGTRVASNTTSYTQGALLEDESKSAFAIEGNGFFQVRGADGTTYYTRNGNFN 120 Query: 108 VT--DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA--------T 157 + G+ ++ + YPVLD I +P + A T Sbjct: 121 WSIGPTGTTLTNTDGYPVLDSNGNTIVLPNNVNSGKAVVTTDGQVGYYNNAGAYVSMNRT 180 Query: 158 MGLYSVDMSQGFVR------RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMG 211 +GL + G + R + + +L+ + +G+LE SN EM Sbjct: 181 IGLSQFNNPAGLEKAGSNLLRATNASGAALNEATNANLTRSKIHQGYLEGSNVQVADEMV 240 Query: 212 QMIHLTQKFNSITTLIDENEKSMLEAIR 239 +I + + + I ++ + +A Sbjct: 241 NLIVAQRAYQLNSKAITTSDDMLEQANN 268 >gi|254421122|ref|ZP_05034846.1| flagellar basal-body rod protein FlgG [Brevundimonas sp. BAL3] gi|196187299|gb|EDX82275.1| flagellar basal-body rod protein FlgG [Brevundimonas sp. BAL3] Length = 262 Score = 153 bits (385), Expect = 3e-35, Method: Composition-based stats. Identities = 41/259 (15%), Positives = 91/259 (35%), Gaps = 21/259 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + + A + + +++N++N +TVGF+ + +F +++ + Sbjct: 1 MQALRTAASGMAAQQLNVEVISNNIANMNTVGFKKQRAEFQDLLYQNVERMGAQSSSQGT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 Q + V +G Y E G+ TG + D A++G +F + P G I TR G Sbjct: 61 VVPTGIQIGAGVKAGAVYRVTEQGTPAQTGNDYDMAIDGKGYFQITLPSGEIGYTRAGNL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFN-VGEKGEISQKGKVIATMGLYSVDM 165 +V +G +V+ G + V + + L + Sbjct: 121 QVNQEGQIVTDDGYALQPAVTIPQDATDVTISKSGLVQVTQAGQTAPTTVGQIELATFFN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ + + +G+ E SN +S+ E+ +I + + Sbjct: 181 EAGLEAIGDNLLLETAASGAANIGTPGSPGFGKILQGYTEASNVDSVAEISALIIAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + +I + + + Sbjct: 241 EMNSKVISTADNMLSVTAQ 259 >gi|148380596|ref|YP_001255137.1| flagellar basal body rod protein [Clostridium botulinum A str. ATCC 3502] gi|153932501|ref|YP_001384883.1| flagellar basal body rod protein FlgG [Clostridium botulinum A str. ATCC 19397] gi|153936688|ref|YP_001388352.1| flagellar basal body rod protein FlgG [Clostridium botulinum A str. Hall] gi|153938096|ref|YP_001391939.1| flagellar basal body rod protein FlgG [Clostridium botulinum F str. Langeland] gi|148290080|emb|CAL84199.1| putative flagellar basal-body rod protein [Clostridium botulinum A str. ATCC 3502] gi|152928545|gb|ABS34045.1| flagellar basal body rod protein [Clostridium botulinum A str. ATCC 19397] gi|152932602|gb|ABS38101.1| flagellar basal body rod protein [Clostridium botulinum A str. Hall] gi|152933992|gb|ABS39490.1| flagellar basal body rod protein [Clostridium botulinum F str. Langeland] gi|295319959|gb|ADG00337.1| flagellar basal body rod protein [Clostridium botulinum F str. 230613] gi|322806968|emb|CBZ04538.1| flagellar basal-body rod protein FlgF [Clostridium botulinum H04402 065] Length = 255 Score = 153 bits (385), Expect = 3e-35, Method: Composition-based stats. Identities = 53/258 (20%), Positives = 97/258 (37%), Gaps = 20/258 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKF---SEVVGAIKND------ 51 M S ++ ++LE + T++ N+SN TVG+++ + F +V+ + Sbjct: 1 MIRSLYTAVSGMISLEAKQDTISSNLSNASTVGYKSTNLAFKKFEDVLMENYDKKLGNKN 60 Query: 52 ----IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107 I + G TG DFALEG +F +E+ TRDG F Sbjct: 61 IKNIIGGLSMGNKIDEVNNLFTQGIIQDTGKPTDFALEGRGFFTIENNGRNYYTRDGHFH 120 Query: 108 VTDDGSLVSASGKYPVL--DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 V G LV+ SG + I ++ G IS G + + + Sbjct: 121 VDTRGYLVNDSGYNVMGINRNTGAREAIFVGNKTIGTDASGNISLNGVPSYSFQVADFND 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225 + ++ N P V++ LE SN N EM M+ + F + Sbjct: 181 YNSLKKIGDNLFEGNNPQNIN-----GIVRQNSLEKSNVNVTNEMVNMLTTMRSFETNQK 235 Query: 226 LIDENEKSMLEAIRNIAS 243 ++ ++++ + + + + Sbjct: 236 IVQSIDETLGKTVNEVGA 253 >gi|92116937|ref|YP_576666.1| flagellar basal body rod protein FlgF [Nitrobacter hamburgensis X14] gi|91799831|gb|ABE62206.1| flagellar basal body rod protein [Nitrobacter hamburgensis X14] Length = 255 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 59/252 (23%), Positives = 115/252 (45%), Gaps = 11/252 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN-----DIDQK 55 M+ + IGL+ Q+ LE+++ VA+N++N T G++ + F E + + D++ Sbjct: 1 MENTLLIGLSRQMMLERQMDVVANNVANVTTNGYKADRSLFEEYLMPGAHEDNFVGRDRR 60 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115 +SFV + G T LD A++G A+ +++P G TRDG ++ G LV Sbjct: 61 LSFVQDRATFHDFAGGPTEQTKNPLDVAIDGKAFLVVQTPAGERYTRDGGLQINAQGQLV 120 Query: 116 SASGKYPVLDM-----ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170 +ASG + I ++ +G + + + L S +Q + Sbjct: 121 TASGNPVLGSNGPITFQQTDHDITISNDGTVTVLEGVNNAADSIRGKLRLVSFAQAQKLL 180 Query: 171 RRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + ++ S + + V +GF+E SN N++ EM +M+ +++ + + TL+ + Sbjct: 181 KEGSNLYSAGAGNSARP-DTSARVHQGFIEKSNVNAVTEMSRMVEVSRAYTQMATLLQQQ 239 Query: 231 EKSMLEAIRNIA 242 AI +A Sbjct: 240 SDLQRSAIEKLA 251 >gi|328543157|ref|YP_004303266.1| flagella basal body rod protein [polymorphum gilvum SL003B-26A1] gi|326412903|gb|ADZ69966.1| Flagella basal body rod protein [Polymorphum gilvum SL003B-26A1] Length = 245 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 69/248 (27%), Positives = 134/248 (54%), Gaps = 11/248 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN-----DIDQK 55 M+ + I L+ Q+ L ++L A+NM+N +T GF+ ++ F E V + D K Sbjct: 1 MENAQLISLSRQVTLRRQLDVAANNMANMNTSGFKAQRLTFEEYVMPVARASEFKGGDMK 60 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115 +S+V + + GS I TG LD A++GD W A+++ G TR+G + + G+LV Sbjct: 61 LSYVQDYQTITNFLSGSIILTGNPLDLAVDGDGWLAVQTEDGEAYTRNGALHLDNTGTLV 120 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 +A G+ + D PIQ ++D ++ + G IS + + + L + D Q N+ Sbjct: 121 TAEGRPVLTD--GGPIQFTREDGKIDISDDGTISTELGLRGRLRLVTFDQPQNARAIGNN 178 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 + + P + ++ V V +G LE+SN + E+ Q+I +T+K+ +++ L++++++ + Sbjct: 179 LLLYDDP----QPVTRVKVIQGGLENSNVQGVVEVTQIIDITRKYETVSKLLNQSDELLR 234 Query: 236 EAIRNIAS 243 +AI + + Sbjct: 235 QAIERLGT 242 >gi|301645415|ref|ZP_07245356.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 146-1] gi|301076299|gb|EFK91105.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 146-1] Length = 261 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 40/261 (15%), Positives = 86/261 (32%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + I A + +S +A+N++N +T GF+ +V F ++ + Sbjct: 1 MNAALWISKTGLSAQDAEMSAIANNIANVNTTGFKRDRVMFQDLFYQTQEAPGAMLDQNN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106 Q S V + G+ +T ++ A+ G + ++ I TRDG Sbjct: 61 IMPTGLQFGSGVRIVGTQKTFTEGNVETTDNAMNVAIMGQGFLQVQKANGDIAYTRDGNL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165 +V DG L ++ G ++ + + L + Sbjct: 121 QVNADGVLTNSQGLPLQPEIDVPAGATNVAFGEDGTVTAILPGDSDATELGQLTLVNFAN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ + T++ LE SN + + EM MI + + + Sbjct: 181 PAGLSAEADNLYLETAASGQPTEGVPGEDGLGTLQDNALEGSNVDIVNEMVAMITVQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 ++ + + + + Sbjct: 241 EMNAKMVSAADDMLQYISQTL 261 >gi|146278639|ref|YP_001168798.1| flagellar basal body rod protein FlgG [Rhodobacter sphaeroides ATCC 17025] gi|145556880|gb|ABP71493.1| flagellar basal-body rod protein FlgG [Rhodobacter sphaeroides ATCC 17025] Length = 261 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 38/259 (14%), Positives = 90/259 (34%), Gaps = 21/259 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + I A + R+ +++N++N T G+ + F+++ Sbjct: 1 MKALQIAATGMSAQQTRVDVISNNLANMSTTGYNPRRADFADLHYQQMVRPGTVSAEDGR 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q V + G+ T +LD A++G + + P G TRDG Sbjct: 61 MLPTGVQLGMGVRPSAVSVVLSQGALAQTRGDLDLAIDGRGYIEVTLPSGQSAYTRDGSL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDE-IFNVGEKGEISQKGKVIATMGLYSVDM 165 K + +G +V++ G + V + +++ + L Sbjct: 121 KRSGEGLVVTSDGHEVAPGITIPEDAASVAINGSGEVWAYFSGQVQPQLMGQITLSGFAN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 +G ++ T+++G+LE+S+ +S+ E+ ++I + + Sbjct: 181 EKGLEAIGSNLFVETAASGAPIAGTPGEDGFGTLRQGYLEESSVDSVQEITELIKAQRGY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 +I ++ + + Sbjct: 241 ELNAKVITAADQMLAATAQ 259 >gi|302671949|ref|YP_003831909.1| flagellar basal-body rod protein FlgG1 [Butyrivibrio proteoclasticus B316] gi|302396422|gb|ADL35327.1| flagellar basal-body rod protein FlgG1 [Butyrivibrio proteoclasticus B316] Length = 276 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 44/271 (16%), Positives = 88/271 (32%), Gaps = 34/271 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M S A + + T+++N++N +T G++ +F ++ + + Sbjct: 1 MVRSLWSAATGMNAQQTNVDTISNNLANVNTAGYKAQGAQFKSLLYQELQTVTTTANGAP 60 Query: 61 SGKEYL------------SKEVGSFISTGTELDFALEGDAWFALESPRGI--ILTRDGRF 106 + GSF++ A+ GD +F G TR+G F Sbjct: 61 KPVTSQVGLGTRVASINQYFKQGSFLTNDNPAAMAISGDGFFGYLGSDGTSKYYTRNGNF 120 Query: 107 KV-----TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA----- 156 +++ + V+D+ I + + G+ A Sbjct: 121 SWALSEAGGTTLVLTTAEGNKVMDINGAEITVDGNRVASRITIGGDGKIYYPDDAGVPQD 180 Query: 157 ---TMGLYSVDMSQGFVRRENSGISPN-------IPPTPLEDLSGVTVKRGFLEDSNANS 206 +GL+ +G R + T + + +G+LE SN N Sbjct: 181 LGKQIGLWQFPNREGLERIGSVAFQETPASGAAINENTAAAGIKKSEIVQGYLEGSNVNV 240 Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 EM +I + + +T I ++ M A Sbjct: 241 ATEMVNLIVAQRAYEMNSTAIQTTDEMMQTA 271 >gi|86750896|ref|YP_487392.1| flagellar basal body rod protein FlgG [Rhodopseudomonas palustris HaA2] gi|86573924|gb|ABD08481.1| Flagellar basal-body rod FlgG [Rhodopseudomonas palustris HaA2] Length = 262 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 40/259 (15%), Positives = 88/259 (33%), Gaps = 21/259 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55 + A E + +++N++N T GF+ +F +++ + + Sbjct: 1 MRALYTAATGMAAQELNVQVISNNIANMRTTGFKKQTAQFQDLIYDHVRRVGAQASDQGT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 V + G+ +TG +LD A+ G+ +F ++ P G TRDG F Sbjct: 61 ILPVGVDIGGGVKTVGTPRLMTQGTLSTTGNDLDLAIRGEGFFKIQMPDGTFSYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 + G +V+A+G + V + V+ +GL Sbjct: 121 TTDNTGRIVTANGNPLQPTITIPNGATSITVATNGQVSVTVSGATAPTVLGQIGLTRFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + ++ P +D + + LE +N + E+ +I + + Sbjct: 181 KTGLQPQGDNLFIETQASGPPQDGIATADGLGDMMQKTLEQANVEVVTEISDLISAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 ++ ++ + Sbjct: 241 EMNAKVVSAADQMLQSTSN 259 >gi|325111114|ref|YP_004272182.1| fagellar hook-basal body protein [Planctomyces brasiliensis DSM 5305] gi|324971382|gb|ADY62160.1| fagellar hook-basal body protein [Planctomyces brasiliensis DSM 5305] Length = 256 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 47/256 (18%), Positives = 92/256 (35%), Gaps = 16/256 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M R +++N++N +T F+ F+ + D D Sbjct: 1 MLYGLYQSATGADLQSLRQDVISNNIANANTSSFKRDLAIFAVRPQQAELDGDLDDVPPP 60 Query: 54 --QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDD 111 + G TG D AL G +F + + +L+R G + ++ Sbjct: 61 LQGHPGAAVVAETVTDFAQGPLQETGAAFDIALLGKGFFRVSDGQEELLSRSGSLTLNEN 120 Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE-----KGEISQKGKVIATMGLYSVDMS 166 LV PVLD PI +P +I + ++ + V+ + L + Sbjct: 121 SELVQTDTGLPVLDDKGDPIVVPPNTDINFGEDGLVTAVDRVTGQPFVLGRIDLVHPNNP 180 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 +G + +S + + V++GFLE S + EM MI ++ F + L Sbjct: 181 RGLEKVGDSLYR--AAEGVVTAGPELRVRQGFLEQSGVRPITEMLAMIESSRAFEANMNL 238 Query: 227 IDENEKSMLEAIRNIA 242 I + ++ + ++ + Sbjct: 239 IQNQDNTLGQLLQAVG 254 >gi|239828563|ref|YP_002951187.1| flagellar basal body rod protein [Geobacillus sp. WCH70] gi|239808856|gb|ACS25921.1| flagellar basal body rod protein [Geobacillus sp. WCH70] Length = 278 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 51/278 (18%), Positives = 95/278 (34%), Gaps = 39/278 (14%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVG----------- 46 M F + +A ++R+ +N++N +T G+++ + F E++ Sbjct: 1 MLRGFYTAASGMMAQQRRIEMWTNNIANANTPGYKSDQAALRAFPELLLSRLDKATVPTK 60 Query: 47 -----AIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA------------- 88 ++ I + V + + G TG D AL Sbjct: 61 TPRSFPLQPTIGSINTGVYMQELIPNFRQGDIKETGQPTDIALINGTLPVDAETGKEGTL 120 Query: 89 -WFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGE 147 + I TR+G F + G L + G Y + +I F V G Sbjct: 121 FFIVQNENGDIRYTRNGNFTLNPQGFLTTNDGWYVL---DENGRRIQLPSTNFAVNADGT 177 Query: 148 ISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV---TVKRGFLEDSNA 204 I IA + + V+ N P + T+K+GFLE +N Sbjct: 178 IVANNTRIARINIAFAANPNTLVKEGNGLFRSENGVLPSALGNPNITYTLKQGFLERANV 237 Query: 205 NSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 + M +M+ + F + ++ ++SM +A+ I Sbjct: 238 DLNRAMTEMLSAYRAFEANQKIVQAYDRSMDKAVNEIG 275 >gi|212640499|ref|YP_002317019.1| flagellar basal body rod protein [Anoxybacillus flavithermus WK1] gi|212561979|gb|ACJ35034.1| Flagellar basal body rod protein [Anoxybacillus flavithermus WK1] Length = 262 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 55/265 (20%), Positives = 105/265 (39%), Gaps = 29/265 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKND------ 51 M + L+ ++R+ + +N++N +T G++ + F E++ Sbjct: 1 MFRGLYTAASGMLSQQRRIEMMTNNIANANTPGYKADQASLRAFPEMLMHRIQQTTIPTE 60 Query: 52 ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFAL---EGDAWFALESPRGI 98 I + V + + G TG D A+ G ++F +++ G Sbjct: 61 KKLTWRDRTYIGPLSTGVYVQELVPNFAQGDIRETGNNTDMAIVDGTGTSFFTVQNETGE 120 Query: 99 -ILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157 TR+G F + DG L + G Y + + + +I DE F V E G I++ G IA Sbjct: 121 VRYTRNGHFTIDADGFLTTTDGLYVLDETGN---RIQVGDEQFTVLEDGTITKNGGQIAR 177 Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217 + + + Q ++ N P E T+++ +E SN + M M+ Sbjct: 178 LRIAYAENVQTLMKEGNGLFRAEQQLPPAET---YTIRQQHIERSNVDLSRTMTDMLSAY 234 Query: 218 QKFNSITTLIDENEKSMLEAIRNIA 242 + F + ++ +KSM +A I Sbjct: 235 RAFEANQKILQAYDKSMDKAANEIG 259 >gi|313894945|ref|ZP_07828504.1| fagellar hook-basal body protein [Selenomonas sp. oral taxon 137 str. F0430] gi|312976398|gb|EFR41854.1| fagellar hook-basal body protein [Selenomonas sp. oral taxon 137 str. F0430] Length = 266 Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats. Identities = 54/266 (20%), Positives = 108/266 (40%), Gaps = 27/266 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51 M I + + + +A+N++N GF+ + +F ++ ND Sbjct: 1 MWRGLYIAASGMITETKHTDMIANNLANASNTGFKRDDMAIREFEPMLLRRINDYTADTD 60 Query: 52 ---------------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR 96 + A + G+ +TG DFA+ G+ +F +++P+ Sbjct: 61 VTSFKGFRLGHGAPRVGMLGLGSAVDEIATDHLQGALQTTGNTYDFAISGEGYFVIDTPQ 120 Query: 97 GIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156 G TRDG F + +G L + G+ L PI IP NV G I IA Sbjct: 121 GPRYTRDGSFYRSANGQLQNVRGQAV-LSAQGRPINIPADATRVNVSGDGRIYVGNTEIA 179 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 +G D +++ ++ P P + + T+++G LE SN + + EM ++I+ Sbjct: 180 QLGFVQFDAPDAVIKQGDNLYRPQEGARPTQ--ATGTIEQGLLEMSNTSIVTEMVELINN 237 Query: 217 TQKFNSITTLIDENEKSMLEAIRNIA 242 + + + + + + + +A+ ++ Sbjct: 238 YRVYEAGSRAVQTQDSLLDKAVNDVG 263 >gi|75675314|ref|YP_317735.1| flagellar basal body rod protein FlgG [Nitrobacter winogradskyi Nb-255] gi|74420184|gb|ABA04383.1| Protein of unknown function DUF1078 [Nitrobacter winogradskyi Nb-255] Length = 262 Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats. Identities = 40/258 (15%), Positives = 87/258 (33%), Gaps = 21/258 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55 + A E + +++N++N T G++ + F +++ + + Sbjct: 1 MRALYTAATGMAAQELNVQVISNNIANLRTTGYKKQRAAFQDLIYDHVRRVGAQASTQGT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 V + G+ TG +LD A+ G+ +F ++ P G TRDG F Sbjct: 61 IMPVGIDLGGGVKTVGTPRQMSQGTLSQTGNDLDIAIRGEGFFKIQMPDGTFQYTRDGTF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165 ++ + G +V+A G + V+ +GL Sbjct: 121 QMDNMGRIVNAQGNPVQPTITIPQNSAGITINAQGQVSVTLPGQTTPTVLGQIGLTRFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ P +D +++ LE +N + E+ +I + + Sbjct: 181 KAGLQPVGDNNFKETPASGPFQDGIANLDGFGDMQQSNLEQANVEVVSEISDLIAAQRAY 240 Query: 221 NSITTLIDENEKSMLEAI 238 +I ++ + A Sbjct: 241 EMNAKVISAADQMLQSAA 258 >gi|262276416|ref|ZP_06054225.1| flagellar basal-body rod protein FlgF [Grimontia hollisae CIP 101886] gi|262220224|gb|EEY71540.1| flagellar basal-body rod protein FlgF [Grimontia hollisae CIP 101886] Length = 249 Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats. Identities = 64/249 (25%), Positives = 103/249 (41%), Gaps = 12/249 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + ++ Q L A+N++N T GFR + + + F Sbjct: 1 MDRALFLAMSGAKQDMQALQLRANNLANASTTGFRADLEQARSM--QAYGEGLPTRVFNM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + S GS I+TG ELD A++GD W A+ TR G KV G L + G Sbjct: 59 TERPGYSFAQGSTITTGRELDVAIKGDGWLAVLDGTGQEGYTRVGNLKVDQTGMLQNGHG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172 + +L PI +P +G G +S + + VD ++ + Sbjct: 119 -HLILGEGGAPIFLPLPVSKIEIGSDGTVSVLPQGAPPEAMEEVDRIKLVRPNNEELFKD 177 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 +N P P T E +GV++ G LE SN N + EM +I L + F L+ E+ Sbjct: 178 KNGVFKPVNPGTIFEADAGVSLLTGALEGSNVNPINEMTGLIDLQRHFEMQVKLMKTAEE 237 Query: 233 SMLEAIRNI 241 M +A ++ Sbjct: 238 -MDQASNSL 245 >gi|118443708|ref|YP_877999.1| flagellar basal body rod protein FlgG [Clostridium novyi NT] gi|118134164|gb|ABK61208.1| flagellar basal-body rod protein FlgG [Clostridium novyi NT] Length = 266 Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats. Identities = 54/268 (20%), Positives = 104/268 (38%), Gaps = 30/268 (11%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGA---------- 47 M S ++ + E + +++N++N TVG++ + F +V+ Sbjct: 1 MIRSIYTAVSGLINQEAQQDVISNNLANATTVGYKKDNLVGKSFKDVMMHNYDKVVGGKH 60 Query: 48 IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII------LT 101 +KNDI + Y + G ST DFAL+G +F + + T Sbjct: 61 VKNDIGMLSMGSKLDQSYTNFTQGVLESTDKSTDFALQGRGFFVVSRNSRVAGGGQNFYT 120 Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQK-------DEIFNVGEKGEISQKGKV 154 RDG F V G LV++SG + P + ++GE+ G + Sbjct: 121 RDGHFHVERTGYLVNSSGDRVMGQNMRTGAMEPIYLGNERTGPSKISCNDRGELFLDGSL 180 Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMI 214 + + D + ++ ++ +G VK+ +LE SN N M E+ M+ Sbjct: 181 KYKINVVDFDNYETLRKQGDNLY----SGGNPRAYNGAIVKQNYLEKSNVNVMEEVSDMM 236 Query: 215 HLTQKFNSITTLIDENEKSMLEAIRNIA 242 + F S L+ ++++ + + + Sbjct: 237 MTMRNFESNQKLVQSLDETLGKTVNEVG 264 >gi|322435952|ref|YP_004218164.1| flagellar basal-body rod protein FlgG [Acidobacterium sp. MP5ACTX9] gi|321163679|gb|ADW69384.1| flagellar basal-body rod protein FlgG [Acidobacterium sp. MP5ACTX9] Length = 262 Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats. Identities = 49/257 (19%), Positives = 100/257 (38%), Gaps = 20/257 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK----------- 49 M + + A + L T+A+N++N+ T GFR+ +V+F +++ Sbjct: 1 MIRALYTAASGMSAQQANLDTIANNLANSATAGFRSRRVQFEDMIYQNMITPGSPATQST 60 Query: 50 -NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFK 107 + Q + + + G F T LD A++G +F ++ P I TR+G F Sbjct: 61 VSAGLQIGLGTRTSATEIIQAQGDFNQTQNPLDLAIQGGGFFQIQQPDGTIAYTRNGSFH 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDMS 166 + + G++++ G + + + V + T+ L + Sbjct: 121 LNNQGTIITTEGMSLIPSITIPSNATNVTISPYGVVSATLPGQTAAAQLGTLQLANFANP 180 Query: 167 QGFVRRENSGISPNIPP------TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G NS + TP T+++G+LE+SN + + E QMI + + Sbjct: 181 GGLNSAGNSLFTQTTSSGNPVTDTPGGTSGVGTLEQGYLENSNVDVVTEFVQMILAQRAY 240 Query: 221 NSITTLIDENEKSMLEA 237 S + ++ + + Sbjct: 241 ESNSKVVHVADDMYQQI 257 >gi|126734106|ref|ZP_01749853.1| flagellar basal-body rod protein FlgF, putative [Roseobacter sp. CCS2] gi|126716972|gb|EBA13836.1| flagellar basal-body rod protein FlgF, putative [Roseobacter sp. CCS2] Length = 238 Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats. Identities = 70/243 (28%), Positives = 110/243 (45%), Gaps = 5/243 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + L Q L + T+A+N++N T GFR + F+E V I D A Sbjct: 1 MDNASYTALTRQSGLLNEMQTLANNIANASTTGFRAEGIIFAEHVKTIGPDAPSLSMATA 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + + G+ TG D A+EGD +F +E+P G LTR G F ++G LV+A G Sbjct: 61 NVRNT-VMTQGALAQTGGTFDLAIEGDGFFLVETPGGPRLTRAGAFGPNENGDLVTADGY 119 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 LD P+ +PQ +G G IS G+ I +GL VR G Sbjct: 120 AV-LDAGGAPVFVPQGLGPVGIGPDGTISAGGQPIGQVGLVIPTDPLQMVRE---GSVMF 175 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 E + +GFLE SN N + ++G+MI + + + + +D+ ++ + I+ Sbjct: 176 DARGGFEAAPDGRMLQGFLEGSNVNPILQIGRMIEVQRAYELGQSFLDKEDERIRSVIQA 235 Query: 241 IAS 243 I + Sbjct: 236 IRT 238 >gi|146341904|ref|YP_001206952.1| flagellar basal body rod protein FlgG [Bradyrhizobium sp. ORS278] gi|146194710|emb|CAL78735.1| Flagellar basal-body rod protein flgG (Distal rod protein) [Bradyrhizobium sp. ORS278] Length = 262 Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats. Identities = 43/258 (16%), Positives = 90/258 (34%), Gaps = 21/258 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55 + + A E + +++N++N T GF+ F +++ + + Sbjct: 1 MQALHTAATGMAAQELNVQVISNNIANLRTTGFKKQTAAFQDLIYEHVRRVGAQSSDQGT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 V + S G+ TG +LD A+ G+ +F + P G TRDG F Sbjct: 61 ILPVGIDIGGGVKTVGTPRSMTQGTLSQTGNDLDLAISGEGFFKILMPDGTYQYTRDGTF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165 ++ + G +V+A G ++ S +I + + Sbjct: 121 QMDNQGRIVTAQGNPVQPTISIPQNASGITVNSQGQVSVTLPGSTTSNIIGQLQVTRFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G N+ + +D ++ +G LE +N + + EM ++I + + Sbjct: 181 KAGLQPVGNNQFTDTPSSGAPQDGIANQDGLGSITQGSLEQANVDVVSEMSELIAAQRAY 240 Query: 221 NSITTLIDENEKSMLEAI 238 +I ++ M Sbjct: 241 EMNAKVISAADQMMQSTT 258 >gi|168182722|ref|ZP_02617386.1| flagellar basal body rod protein [Clostridium botulinum Bf] gi|237796078|ref|YP_002863630.1| flagellar basal body rod protein FlgG [Clostridium botulinum Ba4 str. 657] gi|182674102|gb|EDT86063.1| flagellar basal body rod protein [Clostridium botulinum Bf] gi|229264182|gb|ACQ55215.1| flagellar basal body rod protein [Clostridium botulinum Ba4 str. 657] Length = 255 Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats. Identities = 53/258 (20%), Positives = 97/258 (37%), Gaps = 20/258 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKF---SEVVGAIKND------ 51 M S ++ ++LE + T++ N+SN TVG+++ + F +V+ + Sbjct: 1 MIRSLYTAVSGMISLEAKQDTISSNLSNASTVGYKSTNLAFKKFEDVLMENYDKKLGNKN 60 Query: 52 ----IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107 I + G TG DFALEG +F +E+ TRDG F Sbjct: 61 IKNIIGGLSMGNKIDEVNNLFTQGIIQDTGKPTDFALEGRGFFTIENNGRNYYTRDGHFH 120 Query: 108 VTDDGSLVSASGKYPVL--DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 V G LV+ SG + I ++ G IS G + + + Sbjct: 121 VDTRGYLVNDSGYNVMGINRNTGAREAIFVGNKTIGTDANGNISLNGVPSYSFQVADFND 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225 + ++ N P V++ LE SN N EM M+ + F + Sbjct: 181 YNSLKKIGDNLFEGNNPQNIN-----GIVRQNSLEKSNVNVTNEMVNMLTTMRSFETNQK 235 Query: 226 LIDENEKSMLEAIRNIAS 243 ++ ++++ + + + + Sbjct: 236 IVQSIDETLGKTVNEVGA 253 >gi|260574401|ref|ZP_05842405.1| flagellar basal-body rod protein FlgG [Rhodobacter sp. SW2] gi|259023297|gb|EEW26589.1| flagellar basal-body rod protein FlgG [Rhodobacter sp. SW2] Length = 261 Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats. Identities = 41/259 (15%), Positives = 94/259 (36%), Gaps = 21/259 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + I + A + R+ V++N++N T G+ + F+++ Sbjct: 1 MNALQIAASGMAAQQMRVDVVSNNLANMSTTGYNARRADFADLHYQQLARPGTVSAQDGT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q V + G+ TG +LD A+EG + + P TRDG Sbjct: 61 ILPTGVQLGLGVRPAAVSMVMAQGTLAQTGGDLDLAIEGQGYLEVTLPSGASAYTRDGAL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 K T DG +V++ G + + + V + ++ + L Sbjct: 121 KRTGDGLIVTSEGHQVAPGITIPADARSLSINADGEVYAYFVDQVQPSLLGQLNLVGFTN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 +G ++ + + T+++G+LE+S+ +++ E+ ++I + + Sbjct: 181 EKGLEAIGSNLFLESPASGAAIVGTPGQDGLGTLRQGYLEESSVDAVREVTELIKAQRGY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 +I ++ + + Sbjct: 241 ELNAKVITAADQMLSATTQ 259 >gi|331666548|ref|ZP_08367422.1| flagellar basal-body rod protein FlgG [Escherichia coli TA271] gi|331065772|gb|EGI37656.1| flagellar basal-body rod protein FlgG [Escherichia coli TA271] Length = 261 Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats. Identities = 40/261 (15%), Positives = 85/261 (32%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + I A + +S +A+N++N +T GF+ +V F ++ + Sbjct: 1 MNAALWISKTGLSAQDAEMSAIANNIANVNTTGFKRDRVMFQDLFYQTQEAPGAMLDQNN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106 Q S V + G+ +T ++ A+ G + ++ I TRDG Sbjct: 61 IMPTGLQFGSGVRIVGTQKTFTEGNVETTDNAMNVAIMGQGFLQVQKANGDIAYTRDGNL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165 +V DG L + G ++ + + L + Sbjct: 121 QVNADGVLTISQGLPLQPEIDVPAGATNVAFGEDGTVTAILPGDSDVTELGQLTLVNFAN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ + T++ LE SN + + EM MI + + + Sbjct: 181 PAGLSAEGDNLYLETAASGQPTEGVPGEDGLGTLQDNALEGSNVDIVNEMVAMITVQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 ++ + + + + Sbjct: 241 EMNAKMVSAADDMLQYISQTL 261 >gi|209884526|ref|YP_002288383.1| flagellar basal-body rod protein FlgG [Oligotropha carboxidovorans OM5] gi|209872722|gb|ACI92518.1| flagellar basal-body rod protein FlgG [Oligotropha carboxidovorans OM5] Length = 262 Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats. Identities = 40/258 (15%), Positives = 86/258 (33%), Gaps = 21/258 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55 + A E + +++N++N T G++ F +++ + + Sbjct: 1 MRALYTAATGMAAQELSVQVISNNIANLRTTGYKKQMASFQDLLYEHVQRVGAQASDQGT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 V + G+ + G +L+ A+ G+ +F ++ P TRDG F Sbjct: 61 VLPVGIDIGGGVKTVGTPRLMTQGTLLPVGGDLNIAVRGEGYFKIQLPDSTYAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165 G +V+A G + +A S VI +GL Sbjct: 121 TTDGQGRIVNAQGNFLQPTIAVPQNASQLTINAQGQVSVMLPGSTTPSVIGQIGLTRFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ + P +D +++G LE +N + E+ +I + + Sbjct: 181 KAGLQSIGDNLFTDTPASGPPQDGIANTDGFGDIQQGNLEQANVEVVSEISDLIAAQRAY 240 Query: 221 NSITTLIDENEKSMLEAI 238 ++ ++ M Sbjct: 241 EMNAKVVSAADQMMQSTT 258 >gi|110677662|ref|YP_680669.1| flagellar basal body rod protein FlgF [Roseobacter denitrificans OCh 114] gi|109453778|gb|ABG29983.1| flagellar basal-body rod protein FlgF, putative [Roseobacter denitrificans OCh 114] Length = 237 Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats. Identities = 69/241 (28%), Positives = 112/241 (46%), Gaps = 6/241 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M+ S + Q L + + VA+N++N T GFR V FSE V ++ D +S Sbjct: 1 MENSGYTTITRQSGLMKEMRVVANNIANAATSGFRQEGVIFSEYVKSV--DGASSLSMGQ 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + S G+ TG + DFA+EGD +F +E+P G LTR G F DG LV+ G Sbjct: 59 ADARQTSFAQGALTQTGGQFDFAIEGDGFFLVETPLGERLTRAGAFSPNADGDLVTPDGY 118 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 LD P+ IP V G IS G + +GL QG VR + + Sbjct: 119 RV-LDAGGAPVFIPPGAADIAVSADGTISTNGDPVGQLGLVQPRNPQGLVREDGVMFRAD 177 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 E + + F+E+SN N + ++ +MI + + + + ++ ++ + +A+R Sbjct: 178 EG---YEAAEQGRILQSFVENSNVNPILQLTRMIEVQRAYELGASFVEAEDERVRQAMRT 234 Query: 241 I 241 + Sbjct: 235 M 235 >gi|186477698|ref|YP_001859168.1| flagellar basal body rod protein FlgF [Burkholderia phymatum STM815] gi|184194157|gb|ACC72122.1| flagellar basal-body rod protein FlgF [Burkholderia phymatum STM815] Length = 252 Score = 152 bits (383), Expect = 5e-35, Method: Composition-based stats. Identities = 58/245 (23%), Positives = 96/245 (39%), Gaps = 8/245 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI----DQKI 56 M ++ ++ + VA+N++NT T GF+ F V A + D Sbjct: 1 MDRLIYTAMSGATQALEQQAVVANNLANTSTTGFKAQLATFRAVPMAFGDGSTIQDDTTR 60 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLV 115 +FV S G TG LD A++G W ++ +P TR G V ++G LV Sbjct: 61 TFVLSSTPGADYTPGPIQQTGNPLDVAIQGPGWLSVLTPDGEEAYTRAGNLHVDENGQLV 120 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEK---GEISQKGKVIATMGLYSVDMSQGFVRR 172 +A+ V V + + I G + L V+ + G ++R Sbjct: 121 TANNLPVVGGGGPVAVPPGAQVTIGKDGTVSALMPGDPATTIALVDQLKLVNPAPGALKR 180 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 + G+ P + V V G LE SN N + M MI ++F T +I+ ++ Sbjct: 181 GDDGLFHTNDGNPADADPAVVVAAGALEGSNVNPVSAMVSMITNARQFQMQTKMIESADQ 240 Query: 233 SMLEA 237 + A Sbjct: 241 NEQSA 245 >gi|149173757|ref|ZP_01852386.1| flagellar hook basal body protein flgG [Planctomyces maris DSM 8797] gi|148847287|gb|EDL61621.1| flagellar hook basal body protein flgG [Planctomyces maris DSM 8797] Length = 266 Score = 152 bits (383), Expect = 5e-35, Method: Composition-based stats. Identities = 42/259 (16%), Positives = 91/259 (35%), Gaps = 22/259 (8%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID--------- 53 + A L +A+N++N+ T ++ + F ++ Sbjct: 4 RALYSSATGMAANSFNLDIIANNLANSSTTAYKQSRANFEDIFYENFKLPGVQDNQGNIT 63 Query: 54 ----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109 E GS + + D A+ GD +F + + TR G F + Sbjct: 64 PTGIALGIGTRVQSTEGDFEQGSILPSNGTYDLAIVGDGFFRVNDGTQDLYTRAGNFSLN 123 Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG----KVIATMGLYSVDM 165 +G+LV AS ++ I + + Q+G + + + Sbjct: 124 ANGNLVMASADKGYQLQPTISIPQDAINITISGDGVVSYQQQGSTQIQTAGNIQIARFIN 183 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 +QG VR+ ++ + P + T +++GFLE SN + E+ ++I + F Sbjct: 184 NQGLVRQGDNLYTETTGSGPSQFGDPGTEGRGQLRQGFLEQSNVEPVRELVELIKTQRNF 243 Query: 221 NSITTLIDENEKSMLEAIR 239 + ++ ++++ Sbjct: 244 ELNSQVVQAADQTLQTVAN 262 >gi|226950050|ref|YP_002805141.1| flagellar basal body rod protein [Clostridium botulinum A2 str. Kyoto] gi|226841546|gb|ACO84212.1| flagellar basal body rod protein [Clostridium botulinum A2 str. Kyoto] Length = 263 Score = 152 bits (383), Expect = 5e-35, Method: Composition-based stats. Identities = 54/270 (20%), Positives = 107/270 (39%), Gaps = 36/270 (13%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI----------KN 50 M + + +A + +L ++++N++N +TVG++ V F E+V + Sbjct: 1 MLRALWNSKSGLIAQQNKLDSISNNLANVNTVGYKREDVSFQELVQETLKRKGYPTSDRP 60 Query: 51 DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVT 109 +I A+ + + G+ ++TG + D A++G +F + G R G F + Sbjct: 61 EIQTGTGVKATNWIRDTHQQGALLTTGNKTDLAIDGQGFFRVIMADGDYAYERSGNFLID 120 Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169 +G LV +G + Q+ Q + + + G IA G SV + G Sbjct: 121 RNGMLVDENGNALDI-------QLQQPEGVQILNRIGGFDANNINIAEDGSISVRDTDGL 173 Query: 170 VRRENSGISPNI-----------------PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQ 212 + N + + V++ +GFLE+SN ++ EM + Sbjct: 174 NKVVGKINIYNAVGADAFLSIGRNLYLPRDGVNVFVNNDVSILQGFLENSNVDAGKEMTE 233 Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 MI + F + I ++ M + N+ Sbjct: 234 MIITQRAFELSSRGIKTADE-MWGIVNNMR 262 >gi|154249603|ref|YP_001410428.1| hypothetical protein Fnod_0921 [Fervidobacterium nodosum Rt17-B1] gi|154153539|gb|ABS60771.1| protein of unknown function DUF1078 domain protein [Fervidobacterium nodosum Rt17-B1] Length = 250 Score = 152 bits (383), Expect = 5e-35, Method: Composition-based stats. Identities = 47/257 (18%), Positives = 94/257 (36%), Gaps = 23/257 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56 M L ++ T+++N++N +T G++ F + I + Sbjct: 1 MYRGVYTAAMGMLVDITKIDTLSNNLANVETNGYKADTPTFKAYFNKEIDRIKPEPENRR 60 Query: 57 ----------SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106 V + + G T A+ GD +FA+ I TR+G F Sbjct: 61 VEVKKIGNLEQAVILDEVRTNFSQGILEQTNVPSHIAINGDGFFAVRKANEIFYTRNGEF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 +G LV+ G Y + +I + + G VI + +Y++ Sbjct: 121 IRDSNGRLVNTQGNYLL---NQNGQEIVVPETFSIDEAGNILDGNGNVIDRIAVYALSNP 177 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 + +G N+P + G++E SN N + EM +MI + + + + Sbjct: 178 RKIGDTLFAGQPQNLPED------SFRILPGYIEKSNVNVVREMVKMIEAHRHYEATSKA 231 Query: 227 IDENEKSMLEAIRNIAS 243 I +++ + + I N+ + Sbjct: 232 IVVHDELLNKVINNVGA 248 >gi|115523557|ref|YP_780468.1| flagellar basal body rod protein FlgF [Rhodopseudomonas palustris BisA53] gi|115517504|gb|ABJ05488.1| flagellar basal body rod protein [Rhodopseudomonas palustris BisA53] Length = 254 Score = 152 bits (383), Expect = 5e-35, Method: Composition-based stats. Identities = 60/251 (23%), Positives = 119/251 (47%), Gaps = 10/251 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN-----DIDQK 55 M+ + IGL+ Q+ LE+++ VA+N++N +T GF+ + F E + + D++ Sbjct: 1 MENAQLIGLSRQVTLERQMDVVANNVANMNTTGFKAERTLFEEYLSPRAHEDNFVGRDRR 60 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115 +S+V + G T LD A++G+A+ +++P G TRDG ++ G LV Sbjct: 61 VSYVQDRATFHDFSSGPLEQTKNPLDVAIDGEAFLVVQTPAGERYTRDGSLQINSQGQLV 120 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI----ATMGLYSVDMSQGFVR 171 +ASG + + Q KD + + + + L + +Q V+ Sbjct: 121 TASGYQVLGTNGPIVFQSTDKDINIAADGNVSVLEGTATVDSLRGKLRLVNFANAQQLVK 180 Query: 172 RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 ++ S + + V++GF+E SN NS+ EM +MI +T+ + ++ ++ + Sbjct: 181 EGSNLYSAAGGAA-AQQDTKAQVRQGFIEKSNVNSVMEMTRMIDVTRAYTQLSAMLQQQG 239 Query: 232 KSMLEAIRNIA 242 + A+ +A Sbjct: 240 ELRRTALEKLA 250 >gi|89056685|ref|YP_512136.1| flagellar basal body rod protein FlgF [Jannaschia sp. CCS1] gi|88866234|gb|ABD57111.1| flagellar basal-body rod protein FlgF [Jannaschia sp. CCS1] Length = 240 Score = 152 bits (383), Expect = 5e-35, Method: Composition-based stats. Identities = 63/242 (26%), Positives = 111/242 (45%), Gaps = 5/242 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M L L + ++ VA+N++N T GFRT + F+E + A ND A Sbjct: 1 MDNPGYASLTRLSGLMREMAVVANNIANISTTGFRTEGLVFAEHIAATGNDSPSLSMGAA 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 G+ +++ + E D A+EG+ +F + +P G +L+R G F D G LV+ G Sbjct: 61 IGRSISAQQGALEQTAS-EFDLAIEGEGFFLIGTPDGEVLSRAGAFIRNDAGELVTPDGY 119 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 Y LD PI +P + V G IS G+ + +GLY + RR + + Sbjct: 120 YL-LDAGGAPIFVPPQAGSVAVSSDGTISADGQPLTVVGLYLPNDPLELSRRSGTAFTVE 178 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 P ++ + +GFLE SN + + ++ +MI + + + + +D + + + +R Sbjct: 179 SGVQPADN---ARILQGFLEQSNVDPVAQIARMIEVQRAYELGQSFMDAEDNRIRDFLRT 235 Query: 241 IA 242 Sbjct: 236 AG 237 >gi|310816831|ref|YP_003964795.1| flagellar basal-body rod protein FlgG [Ketogulonicigenium vulgare Y25] gi|308755566|gb|ADO43495.1| flagellar basal-body rod protein FlgG [Ketogulonicigenium vulgare Y25] Length = 261 Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 94/259 (36%), Gaps = 21/259 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 +I LA + R+ +++N++N +T + + +F+++ Sbjct: 1 MRILDIAATGMLAQQTRVEVISNNLANMNTTAYNPRRAEFADLHYQQVQRAGTVAATDGT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q V + G+ TG LD A+EG +F + P I TRDG Sbjct: 61 ILPTGIQLGMGVRTTAVSPMLGQGAVQETGGSLDVAIEGQGYFEVALPDGRIGYTRDGAL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 K+T DG +V+A G + V + + + + + L Sbjct: 121 KLTGDGLIVTAGGLEVAPGIVIPEDAQSVAINADGEVYASFTNAVEQEFLGQLNLAMFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 +G ++ + T+++G+LE S +++ E+ +I + + Sbjct: 181 PRGLEAMGSNLYLETAASGQPMVAVPGEDGLGTLRQGYLEQSTVDAVREVTDLIAAQRGY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + +I ++ + ++ Sbjct: 241 ELNSKVISAADQMLAAMVQ 259 >gi|326319098|ref|YP_004236770.1| flagellar basal-body rod protein FlgF [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375934|gb|ADX48203.1| flagellar basal-body rod protein FlgF [Acidovorax avenae subsp. avenae ATCC 19860] Length = 246 Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats. Identities = 53/244 (21%), Positives = 94/244 (38%), Gaps = 5/244 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + A QR + +A+N++N T GFR F V ++ D + F Sbjct: 1 MDHIIYTSMTGASAAAQRQAVLANNLANASTNGFRAEMSTFRSV--PVQGDGSKTRVFAL 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119 + G TG LD G+AWFA++ TR+G F+V +G L +++G Sbjct: 59 EATSGHVETPGPVQRTGRNLDAMAVGNAWFAVQGLDGTEAYTRNGSFEVNAEGQLRTSNG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV--DMSQGFVRRENSGI 177 + D P D G+ +G + + ++R + + Sbjct: 119 LTVLSDGGGPIDVPPGADVTLGSDGTITARVAGQQPTPIGRLKLATPTPEDPLKRGDDAL 178 Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 P+ + + G LE SN N++ M MI +++F + L+ E + A Sbjct: 179 FRTASGDPMPNDPNARLLSGALEGSNVNAVESMVGMIAASRQFEAQMRLLQTTENNDKTA 238 Query: 238 IRNI 241 + + Sbjct: 239 AQLL 242 >gi|54308098|ref|YP_129118.1| flagellar basal body rod protein FlgF [Photobacterium profundum SS9] gi|46912524|emb|CAG19316.1| putative flagellar basal-body rod protein FlgF [Photobacterium profundum SS9] Length = 249 Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats. Identities = 59/243 (24%), Positives = 98/243 (40%), Gaps = 11/243 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + ++ + T A+N++N T GFR + + + F Sbjct: 1 MDRALYLAMSGAKQDMYGMQTHANNLANVRTTGFRADLEQARSM--QAYGEGLPSRVFAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + GS ++TG +LD A+EGD W A+ TR G K+ + G L +++G Sbjct: 59 TERPGQDFSQGSVMTTGRDLDVAIEGDGWLAVLDASGQEAYTRAGHLKIDETGMLQNSNG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172 +L PI IP VG G IS + + VD ++ + Sbjct: 119 N-LMLGENGGPIFIPLPISKIQVGNDGTISVLPQGAPPEAMEIVDRLKLVRPDNRDLFKD 177 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 N P + +GVT+ +G LE SN N++ EM MI L + F ++ E+ Sbjct: 178 VNGLFKSKTPGVIYDADAGVTLLKGALEGSNVNAVGEMTSMIDLQRHFEMQVKIMKTAEE 237 Query: 233 SML 235 Sbjct: 238 MDQ 240 >gi|330809230|ref|YP_004353692.1| flagellar basal-body rod protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327377338|gb|AEA68688.1| Flagellar basal-body rod protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 257 Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats. Identities = 46/257 (17%), Positives = 101/257 (39%), Gaps = 16/257 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS--- 57 M S +I + A + + ++++N++N T+G++ +V F ++V + D Sbjct: 1 MIDSLSIASSGLTANQAWIDSISNNVANMQTIGYKRSQVDFHDMVREVGTRDDGGGMTES 60 Query: 58 -----FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDD 111 + + + G+ +G LD A++GD +F + P G TR GRF + + Sbjct: 61 LLTGAGIQASQPSQVFSPGTVRESGNALDLAIQGDGFFEVALPTGELAYTRAGRFHLDSE 120 Query: 112 GSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170 G L G+ D+ P + + V + + + + L ++ Sbjct: 121 GQLAMPDGQTLTADLRVPPDARNLVIKQNGEVQATITETGEIINVGQVQLAKFASAEALT 180 Query: 171 RRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225 + + P + +G++E SN N + EM ++ + + Sbjct: 181 KLSDGLYRPTQASGEAIYAEPGRDGQGVLLQGYVEMSNVNLIDEMSGLVLAQRAYQMNAR 240 Query: 226 LIDENEKSMLEAIRNIA 242 L+ +++ + E I N+ Sbjct: 241 LLQASDQIL-ETINNLR 256 >gi|152980353|ref|YP_001353112.1| FlgF flagellar basal body rod protein [Janthinobacterium sp. Marseille] gi|151280430|gb|ABR88840.1| FlgF flagellar basal body rod protein [Janthinobacterium sp. Marseille] Length = 246 Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats. Identities = 56/246 (22%), Positives = 95/246 (38%), Gaps = 6/246 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M ++ + ++ ST A N++N T GFR F V + ++ +FV Sbjct: 1 MDRLIYTAMSGAKQIMEQQSTTAHNLANVSTTGFRAQMDTFRAV--PVVSNGLPTRTFVV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 G TG LD A++G W A+E TR G K+ ++G L + G Sbjct: 59 DSTIGTDFRAGPIQQTGRTLDLAVQGPGWLAVERADGTEGYTRSGSLKINENGVLQTEGG 118 Query: 120 KYPVLDMAS---VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + D P + + + G I L V+ G + R + G Sbjct: 119 LNVLADGGPITIPPNVKISFAKDGTISSVDSGNVPGATIEIARLKLVNPDVGNLERSSDG 178 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 I P + + V V G +E SN N + M MI L ++F ++ + + + + Sbjct: 179 IFITKDRLPADVDANVGVISGAIEGSNVNVVDAMVNMISLARQFELNMKMLKDADSNAAK 238 Query: 237 AIRNIA 242 A + +A Sbjct: 239 ADQFLA 244 >gi|269792758|ref|YP_003317662.1| hypothetical protein Taci_1148 [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100393|gb|ACZ19380.1| protein of unknown function DUF1078 domain protein [Thermanaerovibrio acidaminovorans DSM 6589] Length = 263 Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats. Identities = 53/263 (20%), Positives = 99/263 (37%), Gaps = 24/263 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M G +A L E+ L V +N++N DT GFR + + I++ + V Sbjct: 1 MFRGIYAGTSAMLVQEKMLDVVGNNLANVDTSGFRARIAVNKSFPEELMDRIERSMDPVV 60 Query: 61 S--------------------GKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GII 99 + + +G+ TG LD A+EG+ +F ++ Sbjct: 61 KEGFAPGGRIPIGVLSLANVLHETAMRTTMGALERTGAPLDLAIEGEGFFVVQDGAGNTF 120 Query: 100 LTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG 159 TR G F+ + G +V+ G + D + I + + GE G++ G+ + T+ Sbjct: 121 YTRSGHFQRNEQGQVVTHEGMLLLGDGGPIEIGEGTQVLV---GEDGQVFVDGEAVGTVR 177 Query: 160 LYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 + S ++ ED+ + GFLE SN N + EM +MI + Sbjct: 178 VVRFQTPSRLRNVGKSLLAETQESGAPEDVEAPKLAVGFLERSNVNVVEEMTKMIEANRA 237 Query: 220 FNSITTLIDENEKSMLEAIRNIA 242 + + + ++ + Sbjct: 238 YEAAAKTVTIQDELSSRLSNSFG 260 >gi|58039417|ref|YP_191381.1| flagellar basal body rod protein FlgG [Gluconobacter oxydans 621H] gi|58001831|gb|AAW60725.1| Flagellar basal-body rod protein FlgG [Gluconobacter oxydans 621H] Length = 263 Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats. Identities = 46/262 (17%), Positives = 101/262 (38%), Gaps = 22/262 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + +I A + + T+++N++N T G++ + +F +++ + Sbjct: 1 MRALDIAGTGMQAQQTNVETISNNIANMSTTGYKRSRAEFQDLIYQNIRRVGASSSDTGT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q V + Y + GS T LD A++G +F ++ P G TRDG F Sbjct: 61 TIPAGAQVGLGVKTAAIYRINDQGSLEQTSNSLDLAVQGRGYFQVQLPSGQLAYTRDGTF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQK-DEIFNVGEKGEISQKGKVIATMGLYSVDM 165 + ++GSLV+A G + D+ V + ++ + L Sbjct: 121 SMDNNGSLVTADGYLISPTITIPNNAQSISVDQSGQVSVQIAGQNNTTLVGQLQLGIFTN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLS-----GVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + ++ +G++E+SN N + E+ +I + + Sbjct: 181 ENGLAAMGQNLFTQTTASGDAMMGNPEAVGYGSIMQGYVENSNVNVVTEITDLITAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNIA 242 + +I ++ M + + N+ Sbjct: 241 EMNSKVITASDDMM-KTVTNLG 261 >gi|330826756|ref|YP_004390059.1| flagellar basal-body rod protein FlgF [Alicycliphilus denitrificans K601] gi|329312128|gb|AEB86543.1| flagellar basal-body rod protein FlgF [Alicycliphilus denitrificans K601] Length = 246 Score = 151 bits (382), Expect = 6e-35, Method: Composition-based stats. Identities = 53/244 (21%), Positives = 87/244 (35%), Gaps = 5/244 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + A R + +A+N++N T GFR F V ++ F Sbjct: 1 MDRIIYTSMTGASAAAHRQAVLANNLANVSTYGFRAEMSSFRSV--PLQGSGSTTRVFAL 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119 + G TG LD G+AWFA++ TR G F+VT+ G LV+ +G Sbjct: 59 EATSGHVETPGPVQRTGRNLDAMAAGNAWFAVQGLDGTEAYTRAGSFEVTEAGQLVTPTG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS--QGFVRRENSGI 177 + D + + G+ T+G + ++R + G+ Sbjct: 119 LPVLSDGGAPITAPQGAELTLGADGTVTARVPGQQPQTVGRLKLATPAQDDPLKRGDDGL 178 Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 P+ + G LE SN N + M MI ++F L+ E A Sbjct: 179 FRTASGEPMASDPAARLLAGALEGSNVNPVESMVGMIAAARQFEQQMRLLQTAENDDKTA 238 Query: 238 IRNI 241 + + Sbjct: 239 SQLL 242 >gi|319944134|ref|ZP_08018412.1| flagellar basal-body rod protein FlgF [Lautropia mirabilis ATCC 51599] gi|319742628|gb|EFV95037.1| flagellar basal-body rod protein FlgF [Lautropia mirabilis ATCC 51599] Length = 245 Score = 151 bits (382), Expect = 6e-35, Method: Composition-based stats. Identities = 50/242 (20%), Positives = 95/242 (39%), Gaps = 2/242 (0%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + AL +R ++ N++N T GFR + V + ++ V Sbjct: 1 MDRMIYLSMTGAKALMERQDALSHNLANASTDGFRADLMTARAVPIREEGTATTRVFNVE 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + + G TG LD A+ + WFA+++ TRDG V + G+L + G Sbjct: 61 TSTGFDG-KSGPIRQTGNPLDLAIRDNGWFAVQAADGSEAYTRDGGLVVDEQGNLRTRRG 119 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 + + D + + ++ + G + K L VD +++ + G+ Sbjct: 120 QTVLGDGGPISVPAGADVQVADDGTVMVQVGRQKPSQAGKLKLVDPDMAELKKGDDGLMR 179 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 V V +G +E SN N + M MI + ++F L+ E + A + Sbjct: 180 MKEGGEAPVSDSVRVVQGAVEGSNVNVVESMVGMIEVQRQFEMQMKLLQTAESNEQRASQ 239 Query: 240 NI 241 + Sbjct: 240 IL 241 >gi|319764540|ref|YP_004128477.1| flagellar basal-body rod protein flgf [Alicycliphilus denitrificans BC] gi|317119101|gb|ADV01590.1| flagellar basal-body rod protein FlgF [Alicycliphilus denitrificans BC] Length = 246 Score = 151 bits (382), Expect = 6e-35, Method: Composition-based stats. Identities = 53/244 (21%), Positives = 87/244 (35%), Gaps = 5/244 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + A R + +A+N++N T GFR F V ++ F Sbjct: 1 MDRIIYTSMTGASAAAHRQAVLANNLANVSTNGFRAEMSSFRSV--PLQGSGSTTRVFAL 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119 + G TG LD G+AWFA++ TR G F+VT+ G LV+ +G Sbjct: 59 EATSGHVETPGPVQRTGRNLDAMAAGNAWFAVQGLDGTEAYTRAGSFEVTEAGQLVTPTG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS--QGFVRRENSGI 177 + D + + G+ T+G + ++R + G+ Sbjct: 119 LPVLSDGGAPITAPQGAELTLGADGTVTARVPGQQPQTVGRLKLATPAQDDPLKRGDDGL 178 Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 P+ + G LE SN N + M MI ++F L+ E A Sbjct: 179 FRTASGEPMASDPAARLLAGALEGSNVNPVESMVGMIAAARQFEQQMRLLQTAENDDKTA 238 Query: 238 IRNI 241 + + Sbjct: 239 SQLL 242 >gi|187778771|ref|ZP_02995244.1| hypothetical protein CLOSPO_02366 [Clostridium sporogenes ATCC 15579] gi|187772396|gb|EDU36198.1| hypothetical protein CLOSPO_02366 [Clostridium sporogenes ATCC 15579] Length = 255 Score = 151 bits (382), Expect = 6e-35, Method: Composition-based stats. Identities = 55/258 (21%), Positives = 98/258 (37%), Gaps = 20/258 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKF---SEVVGAI--------- 48 M S ++ ++LE + T++ N+SN TVG+++ + F +V+ Sbjct: 1 MIRSLYTAVSGMISLEAKQDTISSNLSNASTVGYKSTNLAFKKFEDVLMENYDKKLGNKN 60 Query: 49 -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107 KN I + G TG DFALEG +F +E+ TRDG F Sbjct: 61 IKNVIGGLSMGNKIDEVNNLFTQGIIQDTGKPTDFALEGRGFFTIENNGRNYYTRDGHFH 120 Query: 108 VTDDGSLVSASGKYPVLDMA--SVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 V G LV+ SG + I ++ G IS G + + + Sbjct: 121 VDTRGYLVNDSGYNVMGMNRNTGAREAIFVGNKTIGTDASGNISLNGVPSYSFQVADFND 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225 + ++ N P V++ LE SN N EM M+ + F + Sbjct: 181 YNSLKKIGDNLFEGNNPQNIN-----GIVRQNSLEKSNVNVTNEMVNMLTTMRSFETNQK 235 Query: 226 LIDENEKSMLEAIRNIAS 243 ++ ++++ + + + + Sbjct: 236 MVQAIDETLGKTVNEVGA 253 >gi|291288380|ref|YP_003505196.1| fagellar hook-basal body protein [Denitrovibrio acetiphilus DSM 12809] gi|290885540|gb|ADD69240.1| fagellar hook-basal body protein [Denitrovibrio acetiphilus DSM 12809] Length = 252 Score = 151 bits (382), Expect = 6e-35, Method: Composition-based stats. Identities = 55/253 (21%), Positives = 105/253 (41%), Gaps = 15/253 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + ++R+ ++ N++N +TVG + FSE + D I Sbjct: 1 MINGLYTATSGMAMQQRRMDIISSNLANLNTVGHKKEVGVFSEYIANASETPDDIIRNSD 60 Query: 61 SGKEYL----------SKEVGSFISTGTELDFALEG-DAWFALESPRGIILTRDGRFKVT 109 K + + G TG +D AL +A+FA+++P G+ TRDG F + Sbjct: 61 YNKMINSTVRLDDIKVNFQQGYLKETGNSMDMALTNPNAFFAVDTPYGVRFTRDGSFILN 120 Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169 + G L + G V +M S+ Q E V E+GE+ +G ++ + + + Sbjct: 121 EQGELTTKDGFKVVSNMDSLQPV--QMVEGAIVNEEGEMLLEGALVNNIEIAQFEDLSAL 178 Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 + + + + G+LE SN N + EM +MI ++ F + + +I Sbjct: 179 QKTGRNLYVAVDAL--PDVAENPGLMTGYLEGSNVNPVEEMVKMIEASRGFETYSKIITT 236 Query: 230 NEKSMLEAIRNIA 242 ++ +A+ + Sbjct: 237 FDEIDSKAVNEVG 249 >gi|255523679|ref|ZP_05390645.1| protein of unknown function DUF1078 domain protein [Clostridium carboxidivorans P7] gi|255512548|gb|EET88822.1| protein of unknown function DUF1078 domain protein [Clostridium carboxidivorans P7] Length = 264 Score = 151 bits (382), Expect = 6e-35, Method: Composition-based stats. Identities = 47/262 (17%), Positives = 92/262 (35%), Gaps = 22/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M +A A + +L ++++N++N T G++ V F ++V N Sbjct: 1 MLRILWGSKSAMNAQQDKLDSISNNIANESTTGYKREDVSFQDLVYETLNRKGYPNSGDN 60 Query: 56 ------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKV 108 + V + + Y G T ++ DFA++G+ +F + P G R G F + Sbjct: 61 PKEPINGTGVKATQWYRDNTQGPLRQTDSKTDFAIDGEGYFRVTLPNGTKAYERAGSFNI 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA-------TMGLY 161 ++G +V G ++ + F + G Sbjct: 121 DNNGDIVDKDGNRLDIEFTEEGSNLFNSGTGFTQDNFAVKENGEIYLNVDNSNSVYYGKI 180 Query: 162 SVDMSQGF--VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 +V G + + P + V +G LE+SN N EM MI + Sbjct: 181 NVYNPVGQEALSSIGDNLYTANPGAQINVAQNSNVLQGKLEESNVNIGKEMTDMIIAQRA 240 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 F + + ++ M + ++ Sbjct: 241 FELSSKAMKTGDE-MWGLVNSM 261 >gi|254488392|ref|ZP_05101597.1| flagellar basal-body rod protein FlgG [Roseobacter sp. GAI101] gi|214045261|gb|EEB85899.1| flagellar basal-body rod protein FlgG [Roseobacter sp. GAI101] Length = 261 Score = 151 bits (382), Expect = 6e-35, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 96/259 (37%), Gaps = 21/259 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + I A + R+ T+++N++N T G+ + +FS++ Sbjct: 1 MRALKIAATGMSAQQMRVETISNNLANMSTTGYNARRAEFSDLHYQQLARAGSVSASDGT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q V + GS TG +LD A+EG + + P G TRDG Sbjct: 61 VLPTGVQLGLGVRPAAVSMQLAQGSLSVTGGDLDLAIEGKGFLEVTLPSGQAAYTRDGGL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 K T +G +V++ G ++ + + V + + +++ + Sbjct: 121 KRTGEGLIVTSDGFPVAPEIVIPEDARSISINASGEVFAYFDGNIAAQLLGQFTMSGFSN 180 Query: 166 SQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 ++G + T+++G+LEDS+ +++ E+ ++I + + Sbjct: 181 AKGLEAIGGNLFVETEASGAALVATPGLNGLGTLRQGYLEDSSVDAVREITELIEAQRGY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 +I ++ M + Sbjct: 241 EMNAKVISAADQMMGATTQ 259 >gi|313672411|ref|YP_004050522.1| flagellar basal-body rod protein flgf [Calditerrivibrio nitroreducens DSM 19672] gi|312939167|gb|ADR18359.1| flagellar basal-body rod protein FlgF [Calditerrivibrio nitroreducens DSM 19672] Length = 251 Score = 151 bits (382), Expect = 6e-35, Method: Composition-based stats. Identities = 48/253 (18%), Positives = 99/253 (39%), Gaps = 16/253 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50 M + + + E+ +S +A+N++N +T G++ F + K Sbjct: 1 MLNGLYVAASGMMMQERVVSNIANNLANVNTNGYKKDGFTFQNYIAKPKEFPEDIIRSSL 60 Query: 51 DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEG-DAWFALESPRGIILTRDGRFKVT 109 V + YL G+ TG + D A+ + +F +++P GI TRDG F + Sbjct: 61 YNQTINRTVKLDRNYLDLSEGAVHQTGNKFDLAIGDKNGFFVVDTPWGIRFTRDGAFSIN 120 Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169 D LV+ SG + I GE+ G + + + + + + Sbjct: 121 SDNELVNGSGYRVLSRNNQP---IVINGNDVVFLPTGEVMVNGVQVDQLNIATFEDNTRL 177 Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 + + + ++ + +G++E SN N++ EM +MI + F + +I Sbjct: 178 QKVGRNLFA--AVDILPVEMENPNIMQGYIEGSNVNAVEEMVKMIEANRGFETYQKVIQT 235 Query: 230 NEKSMLEAIRNIA 242 ++ +A + Sbjct: 236 IDQLNEKASNELG 248 >gi|260431749|ref|ZP_05785720.1| flagellar basal-body rod protein FlgF [Silicibacter lacuscaerulensis ITI-1157] gi|260415577|gb|EEX08836.1| flagellar basal-body rod protein FlgF [Silicibacter lacuscaerulensis ITI-1157] Length = 236 Score = 151 bits (382), Expect = 6e-35, Method: Composition-based stats. Identities = 67/241 (27%), Positives = 116/241 (48%), Gaps = 7/241 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M T+ + L+ Q L + VA+N++N +T G+R + FSE V + +S Sbjct: 1 MDTA-YVTLSRQSGLMNEMRLVANNIANANTTGYRQQGLVFSEFVRDLPG--APSLSMSR 57 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 S E G TG + DFA+EGD +F +E+P G LTR G F +G LV+ G Sbjct: 58 GQVRNTSFEQGLLTQTGGQFDFAIEGDGFFLIETPSGNRLTRAGSFAPDANGDLVTPDGY 117 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 LD P+ IP +VG G +S G+++ +G+Y VR ++ P+ Sbjct: 118 RV-LDSNGAPVFIPPDAATIDVGGDGTLSVDGQLLGQIGVYRPTDGTNLVREASTLFRPD 176 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 P+E V FLE SN N++ ++ ++I + + + + ++ ++ + A++ Sbjct: 177 GEVEPVEQ---PVVLHRFLEGSNVNAIDQVTKLIEIQRAYELGQSFLEAEDERIRGALKT 233 Query: 241 I 241 + Sbjct: 234 L 234 >gi|115523556|ref|YP_780467.1| flagellar basal body rod protein FlgG [Rhodopseudomonas palustris BisA53] gi|115517503|gb|ABJ05487.1| flagellar basal-body rod protein FlgG [Rhodopseudomonas palustris BisA53] Length = 262 Score = 151 bits (382), Expect = 7e-35, Method: Composition-based stats. Identities = 38/259 (14%), Positives = 91/259 (35%), Gaps = 21/259 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55 + +A E + +++N++N T F+ + F +++ + + Sbjct: 1 MRALYTAATGMMAQELNVQVISNNIANMRTTAFKKQRAAFQDLIYDHVKRVGAQASDQGT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 V + G+ +TG +LD A+ G+ +F ++ P G TRDG F Sbjct: 61 ILPVGVDIGGGVKTVGTPRIMTQGTLSTTGNDLDMAIRGEGFFKIQMPDGTYTYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 + G +V+++G + V + S ++ +GL Sbjct: 121 TTDNTGRIVTSNGNPLQPTITIPQGSSGLTINAQGQVTVIAQGSTTATLLGQIGLTRFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ + P +D +++ LE +N ++ E+ +I + + Sbjct: 181 KTGLQPIGDNLFTETPASGPPQDGTANADGYGDIQQQTLEQANVEAVTEISDLISAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 ++ ++ + Sbjct: 241 EMNAKVVSAADQMLQSTSN 259 >gi|148256792|ref|YP_001241377.1| flagellar basal body rod protein FlgG [Bradyrhizobium sp. BTAi1] gi|146408965|gb|ABQ37471.1| Flagellar basal-body rod protein flgG (Distal rod protein) [Bradyrhizobium sp. BTAi1] Length = 262 Score = 151 bits (381), Expect = 7e-35, Method: Composition-based stats. Identities = 43/258 (16%), Positives = 89/258 (34%), Gaps = 21/258 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55 + + A E + +++N++N T GF+ F +++ + + Sbjct: 1 MQALHTAATGMAAQELNVQVISNNIANLRTTGFKKQTAAFQDLIYDHVRRVGAQSSDQGT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 V + S G+ TG LD A+ G+ +F + P G TRDG F Sbjct: 61 ILPVGIDIGGGVKTVGTPRSMTQGTLSQTGNSLDLAISGEGFFKILMPDGTFQYTRDGTF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165 ++ + G +V+A G ++ S ++ + L Sbjct: 121 QMDNQGRIVTAQGNPVQPTISIPQNASGITVNAQGQVSVTLPGSTTSNIVGQLQLTRFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G N+ + +D ++ +G LE +N + + EM ++I + + Sbjct: 181 KAGLQPVGNNQFTDTPSSGAPQDGVANQDGLGSITQGSLEQANVDVVSEMSELIAAQRAY 240 Query: 221 NSITTLIDENEKSMLEAI 238 +I ++ M Sbjct: 241 EMNAKVISAADQMMQSTT 258 >gi|89902478|ref|YP_524949.1| flagellar basal-body rod FlgF [Rhodoferax ferrireducens T118] gi|89347215|gb|ABD71418.1| Flagellar basal-body rod FlgF [Rhodoferax ferrireducens T118] Length = 246 Score = 151 bits (381), Expect = 7e-35, Method: Composition-based stats. Identities = 53/245 (21%), Positives = 91/245 (37%), Gaps = 5/245 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M ++ A R + +++N++N T GFR F V ++ D Sbjct: 1 MDRLIYTAMSGANAAAHRQAVLSNNLANVSTNGFRAELSTFRAV--PVRGDGASTRVMAI 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119 GS TG LD G+AWFA++ TR G F+V+ +G+LV+ SG Sbjct: 59 EATAGYVDTPGSAQRTGRGLDAMTTGNAWFAVQGLDGTESYTRSGSFEVSPEGTLVTNSG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS--QGFVRRENSGI 177 + D + + + +G + + R G+ Sbjct: 119 LTVLGDGGAPISIPTGGEVTIGFDGNLSAKVGNQPPTGVGRLKLVTPGADDPLNRSEDGL 178 Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 PL + + V+ G LE SN N++ M MI ++F + L+ E + A Sbjct: 179 FRATSGEPLPNDTNARVQVGSLEGSNVNAIEAMVGMIQTARQFETQMRLLQTAESNDRSA 238 Query: 238 IRNIA 242 + + Sbjct: 239 AQLLG 243 >gi|148980300|ref|ZP_01815987.1| putative flagellar basal-body rod protein [Vibrionales bacterium SWAT-3] gi|145961319|gb|EDK26629.1| putative flagellar basal-body rod protein [Vibrionales bacterium SWAT-3] Length = 250 Score = 151 bits (381), Expect = 7e-35, Method: Composition-based stats. Identities = 41/249 (16%), Positives = 93/249 (37%), Gaps = 20/249 (8%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK-------------ISF 58 A + +++ +++N++N +TVGF+ +V F ++ ++ + + Sbjct: 1 MAAQDAKMTAISNNLANINTVGFKRDRVVFEDLFYSVDKQAGTETTELNEHPTGIQLGNG 60 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLVSA 117 V G+ +T + D A+ GD +F +E+ G + TR+G+F+ DG LV+ Sbjct: 61 VRVVGTEKVFTQGNIQNTNQQFDLAILGDGFFQIENSDGELLYTRNGQFQTNSDGQLVNT 120 Query: 118 SGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 G + ++ P + V + + + + G + + Sbjct: 121 QGYPLIPEVVIPPEATLVSITADGVVSATIPGQVNPEDLGQITIVKFMNPAGLSAQGGNL 180 Query: 177 ISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 + +K+G LE SN + EM MI + + ++ + Sbjct: 181 FVETEGSGEAVELVAGTEGSGQLKQGALEGSNVQVVEEMVDMIATQRAYEMSAKMVSAAD 240 Query: 232 KSMLEAIRN 240 + + + Sbjct: 241 EMLQYIAQQ 249 >gi|307945665|ref|ZP_07661001.1| flagellar basal-body rod protein FlgF [Roseibium sp. TrichSKD4] gi|307771538|gb|EFO30763.1| flagellar basal-body rod protein FlgF [Roseibium sp. TrichSKD4] Length = 246 Score = 151 bits (381), Expect = 7e-35, Method: Composition-based stats. Identities = 64/248 (25%), Positives = 117/248 (47%), Gaps = 12/248 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK-----NDIDQK 55 M+ + I L+ Q AL +L+ VA+NM+N +T GF+ ++ F E V + N D Sbjct: 1 MENAQLIALSRQSALRNQLNVVANNMANINTGGFKAQRLLFEEYVMPVAEATEFNRRDHD 60 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSL 114 + +V GS TG ELD A+EGD +F +++ G TR+G F + + G L Sbjct: 61 LFYVQDYGTRTEFMPGSIKLTGNELDIAIEGDGFFVVQTADGGEAYTRNGGFTLDEAGQL 120 Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174 V+ + K + PI D ++ G IS + V + + + D Q V+ + Sbjct: 121 VTPNDKPVL--TEGGPINFTTADGKIDISRDGTISTELGVRGRIRVVNFDNPQNLVQMGD 178 Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 + + V V +G +E SN + E+ ++I +T+ + +++ +I + ++ Sbjct: 179 NLFQ----GENAIPNAKVRVTQGAIEQSNVEGVVEVTRLIEITRAYTTVSKMIKDADELR 234 Query: 235 LEAIRNIA 242 +AI + Sbjct: 235 QKAISTLG 242 >gi|188582486|ref|YP_001925931.1| flagellar basal-body rod protein FlgG [Methylobacterium populi BJ001] gi|179345984|gb|ACB81396.1| flagellar basal-body rod protein FlgG [Methylobacterium populi BJ001] Length = 263 Score = 151 bits (381), Expect = 7e-35, Method: Composition-based stats. Identities = 35/259 (13%), Positives = 81/259 (31%), Gaps = 21/259 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55 + A E + +++N++N T G++ +V F +++ Sbjct: 1 MRALYAAATGMAAQELNVQVISNNIANLRTTGYKRQQVHFQDLLYQNLRRSGSSTSDQNT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 S V + + G T + D A+ G+ F + P TRDG F Sbjct: 61 ILPAGLALGSGVKTTSTARAMSQGPLAQTDKDYDVAIRGEGLFRVRLPDGRNAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165 + G LV+ G + + + + L Sbjct: 121 DLDAQGQLVTRDGYLLDPGVTVPNTATSVTISATGAVQATLPGQTAPQALGQFQLARFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ P +++ +LE++N N++ E+ +I + + Sbjct: 181 KVGLESIGDNLFVETAASGPAITGLPGSEGFGNLQQNWLEEANVNAVTEISSLIAAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + ++ ++ + + Sbjct: 241 EMNSKVVTAADQMLSTTSQ 259 >gi|148270379|ref|YP_001244839.1| hypothetical protein Tpet_1249 [Thermotoga petrophila RKU-1] gi|147735923|gb|ABQ47263.1| protein of unknown function DUF1078 domain protein [Thermotoga petrophila RKU-1] Length = 249 Score = 151 bits (381), Expect = 7e-35, Method: Composition-based stats. Identities = 47/257 (18%), Positives = 95/257 (36%), Gaps = 24/257 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M L +L +A++++N DT G++ + F + Sbjct: 1 MTRGIYNAAMGMLVDMAKLDRIANDLANVDTAGYKQDREAFRAYLRREVFRQEPDPVESR 60 Query: 49 --KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106 K I + G T A+ G+ +F +E G TR+G F Sbjct: 61 TKKVPIGPLEYATVLDEVRTDLSQGPVEKTDVPYHLAINGEGFFRIEFNGGEYYTRNGEF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 V +G +V+ G Y LD ++ + G G ++ +G+Y+++ Sbjct: 121 TVNSEGYIVTNYGGYL-LDENGERVRFFDDFTVDEEGYV--RDAYGNIVTRIGVYNLENP 177 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 + F +G +P+ + +G++E SN +++ M MI + + Sbjct: 178 EKFGNTLFTGENPS-------PSENFRIMQGYVEKSNVDALKAMVDMISAMRHYELSQRA 230 Query: 227 IDENEKSMLEAIRNIAS 243 + N++ + I ++AS Sbjct: 231 VTVNDELNGKLINSLAS 247 >gi|114799934|ref|YP_758986.1| flagellar basal body rod protein FlgF [Hyphomonas neptunium ATCC 15444] gi|114740108|gb|ABI78233.1| flagellar basal-body rod protein FlgF [Hyphomonas neptunium ATCC 15444] Length = 238 Score = 151 bits (381), Expect = 8e-35, Method: Composition-based stats. Identities = 68/242 (28%), Positives = 119/242 (49%), Gaps = 6/242 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + LA Q L Q + VA+N++N+ T G+++ + F+E + + + DQ +S Sbjct: 1 MSSPIYTTLARQQGLMQEMQVVANNLANSSTTGYKSDRAIFTEFLVSTGDSPDQSLSMGG 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 G E G TG D A++G+ +F +E+P+G LTR G F+++ G LV G Sbjct: 61 LGGHAFQLEQGGLNFTGGRFDLAIQGEGFFMVETPQGERLTRAGHFQLSGAGQLVDMQGN 120 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 PVL PI IP + GE G IS G++I +G+ D R N+ + Sbjct: 121 -PVLSAGGNPITIPDDATDVSFGEDGTISGNGQIIDQVGIMLADG--QLTRDSNTYFAAE 177 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 P +D + +G LE SN + + E+ +MI + + + + L+++ ++ + + I Sbjct: 178 GGVAPTQD---AKLVQGALEQSNVSPVLEVSRMIEVQRAYEAGQALLEKEDQRISQLITA 234 Query: 241 IA 242 + Sbjct: 235 VR 236 >gi|262173356|ref|ZP_06041033.1| flagellar basal-body rod protein FlgG [Vibrio mimicus MB-451] gi|261890714|gb|EEY36701.1| flagellar basal-body rod protein FlgG [Vibrio mimicus MB-451] Length = 250 Score = 151 bits (381), Expect = 8e-35, Method: Composition-based stats. Identities = 44/250 (17%), Positives = 92/250 (36%), Gaps = 20/250 (8%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------------QKISF 58 A + +++ +++N++N +T GF+ +V F ++ I+ Q S Sbjct: 1 MAAQDTKMTAISNNLANVNTAGFKRDRVVFEDLFYNIQRQPGAQVDQVNELPTGVQLGSG 60 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSA 117 V G+ +T ELD A+ G +F +E+ I+ TR+G+F V +G +V++ Sbjct: 61 VRVVGTQKVFTQGNAQNTAQELDLAVMGQGFFQIENSDGQIMYTRNGQFHVNSEGLMVNS 120 Query: 118 SGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 G + + + V + + + L G + Sbjct: 121 QGLPLEPQIQIPDNVVSLSIGVDGTVSATTAGDPAPQQLGQITLAKFINPAGLEAVGGNL 180 Query: 177 ISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 E ++K+G LE SN + EM MI + + ++ + Sbjct: 181 FRETDASGLAEELVAGQDGTGSIKQGALEGSNVQVVEEMVDMITTQRAYEMNAKVVSATD 240 Query: 232 KSMLEAIRNI 241 + +++ Sbjct: 241 DMLKFVAQSV 250 >gi|258514026|ref|YP_003190248.1| hypothetical protein Dtox_0711 [Desulfotomaculum acetoxidans DSM 771] gi|257777731|gb|ACV61625.1| protein of unknown function DUF1078 domain protein [Desulfotomaculum acetoxidans DSM 771] Length = 262 Score = 151 bits (381), Expect = 8e-35, Method: Composition-based stats. Identities = 44/262 (16%), Positives = 97/262 (37%), Gaps = 20/262 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56 M + IG +A A + + + A+N++N +T ++ + +F++++ Sbjct: 1 MIKTLGIGASALNANQTYIDSAANNIANVNTDEYKAERTRFTDLLYNYYYRGTTYPAPTV 60 Query: 57 ---------SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + V G+ E G+ T +D A++G + + SP + +R G Sbjct: 61 DEKATESSGNGVRIGEVKKVFEPGTIKETSNSMDLAIDGAGFIKVISPDGEELFSRGGVL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 KV DG + A+G ++ + + IA + +Y+ Sbjct: 121 KVNSDGVIEDAAGNIIEPEIQLPEGLQNFSISPSGQVTVINGAGMKEEIANISIYNFINP 180 Query: 167 QGFVRRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221 G + ++N ++++GF E SN + + EM ++I + + Sbjct: 181 AGLIAQDNKLYLQTEQSGEAAEGAPGTDGYGSLRQGFTEMSNVDLIQEMVRLIEAQRAYE 240 Query: 222 SITTLIDENEKSMLEAIRNIAS 243 I + M +++S Sbjct: 241 INARSIKTADD-MWGMANSLSS 261 >gi|170758901|ref|YP_001787959.1| flagellar basal body rod protein FlgG [Clostridium botulinum A3 str. Loch Maree] gi|169405890|gb|ACA54301.1| flagellar basal body rod protein [Clostridium botulinum A3 str. Loch Maree] Length = 255 Score = 151 bits (381), Expect = 8e-35, Method: Composition-based stats. Identities = 54/258 (20%), Positives = 98/258 (37%), Gaps = 20/258 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKF---SEVVGAI--------- 48 M S ++ ++LE + T++ N+SN TVG+++ + F +V+ Sbjct: 1 MIRSLYTAVSGMISLEAKQDTISANLSNASTVGYKSTNLAFKKFEDVLMENYDKKLGNKN 60 Query: 49 -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107 +N I + G TG DFALEG +F +E+ TRDG F Sbjct: 61 IQNIIGGLSMGNKIDEVNNLFTQGIIQDTGKPTDFALEGRGFFTIENNGRNYYTRDGHFH 120 Query: 108 VTDDGSLVSASGKYPVL--DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 V G LV+ SG + I ++ G IS G + + + Sbjct: 121 VDTRGYLVNDSGYNVMGINRNTGAREAIFVGNKTIGTDASGNISLNGVPSYSFQVADFND 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225 + ++ N P V++ LE SN N EM M+ + F + Sbjct: 181 YNSLKKIGDNLFEGNNPQNIN-----GIVRQNSLEKSNVNVTNEMVNMLTTMRSFETNQK 235 Query: 226 LIDENEKSMLEAIRNIAS 243 ++ ++++ + + + + Sbjct: 236 IVQSIDETLGKTVNEVGA 253 >gi|149203125|ref|ZP_01880096.1| flagellar basal-body rod protein FlgG [Roseovarius sp. TM1035] gi|149143671|gb|EDM31707.1| flagellar basal-body rod protein FlgG [Roseovarius sp. TM1035] Length = 261 Score = 151 bits (381), Expect = 8e-35, Method: Composition-based stats. Identities = 41/256 (16%), Positives = 91/256 (35%), Gaps = 21/256 (8%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID----------- 53 I A + R+ T+++N++N T G+ + +F+++ Sbjct: 4 LKIAATGMAAQQMRVETISNNLANMSTTGYNARRAEFADLHYQQLARAGTINAADGTVLP 63 Query: 54 ---QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVT 109 Q V + GS T +LD A++G + + P G TRDG K + Sbjct: 64 TGVQLGLGVRPSAISVQLAQGSLTQTNGDLDLAIDGGGYLEVRLPSGQSGYTRDGALKRS 123 Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE-KGEISQKGKVIATMGLYSVDMSQG 168 DG +V++ G ++ + + + + + + L +G Sbjct: 124 ADGVIVNSEGFPIAPEITIPEDARSITINAEGEVFAFFQDTAEAQQLGQIDLVGFTNPKG 183 Query: 169 FVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223 + P T+++G+LEDS+ + + E+ ++I + + Sbjct: 184 LEAIGGNLFVETEASGPANVTTAGQDGLGTLRQGYLEDSSVDPVREITELIEAQRGYELN 243 Query: 224 TTLIDENEKSMLEAIR 239 +I ++ + + Sbjct: 244 AKVITAADQMLSATTQ 259 >gi|114570497|ref|YP_757177.1| flagellar basal body rod protein FlgG [Maricaulis maris MCS10] gi|114340959|gb|ABI66239.1| flagellar basal-body rod protein FlgG [Maricaulis maris MCS10] Length = 261 Score = 151 bits (381), Expect = 8e-35, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 98/259 (37%), Gaps = 21/259 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + A + + +++N++N +T GF+ + +F +++ + Sbjct: 1 MRALTTAATGMQAQQLNVEVISNNLANMNTTGFKRQRAEFQDLLYQNVQQMGAASSDAGT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q V + Y E G+ +TG D A+ G+ +F ++ P TR G F Sbjct: 61 IVPTGVQVGLGVQTASIYRITEQGALSNTGNPFDLAVSGEGYFRVQMPDGSDGFTRAGNF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVP-IQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 V+ DG LV++ G +A + + + V + + + + + L + Sbjct: 121 AVSGDGELVTSEGYTVAPGIAIPNGARQIEINIQGQVQVQIDGQTDMQTVGQIELATFFN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + +++GF+E SN NS+ E+ +I + + Sbjct: 181 QAGLEAIGGNLFLETAASGSASLGTPGSPGFGDIQQGFVETSNVNSVSEITALIQAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 +I +++ M + Sbjct: 241 EMNARVITASDEMMAASSN 259 >gi|217977819|ref|YP_002361966.1| flagellar basal body rod protein [Methylocella silvestris BL2] gi|217503195|gb|ACK50604.1| flagellar basal body rod protein [Methylocella silvestris BL2] Length = 241 Score = 151 bits (380), Expect = 9e-35, Method: Composition-based stats. Identities = 76/243 (31%), Positives = 141/243 (58%), Gaps = 4/243 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 MQ+ + L+ +AL++RL+T+A N++N T G+R +V+F ++ + ++FV+ Sbjct: 1 MQSGLYVSLSGLVALDRRLTTIAANVANQSTPGYRAEEVEFKSLLSKAGAN---PVAFVS 57 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 +G+ ++S+ G I T LD A++G W AL++P G + T+DGR + + G+LVS G Sbjct: 58 NGESFISRRGGVPIKTDGPLDVAVQGHGWLALKTPDGTVYTKDGRMHMEESGALVSVDG- 116 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 +PVLD + PI + + + G I+Q + +G++S+D R NSG+ + Sbjct: 117 FPVLDAGATPILLDPAAGPPTIAQDGMITQNSHQVGAIGIFSLDGQAKLKRYTNSGVMSD 176 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 +P T D S V +GF+E +N N + EM ++I +++ F +I + + +E S+ +AI+ Sbjct: 177 LPATAELDFSNNGVHQGFIEGANINPILEMAKLIMVSRAFENIHSATEGSESSLKDAIKT 236 Query: 241 IAS 243 + + Sbjct: 237 LGA 239 >gi|153940763|ref|YP_001391938.1| flagellar basal body rod protein FlgG [Clostridium botulinum F str. Langeland] gi|152936659|gb|ABS42157.1| flagellar basal body rod protein [Clostridium botulinum F str. Langeland] gi|295319958|gb|ADG00336.1| flagellar basal body rod protein [Clostridium botulinum F str. 230613] Length = 263 Score = 151 bits (380), Expect = 9e-35, Method: Composition-based stats. Identities = 53/264 (20%), Positives = 107/264 (40%), Gaps = 24/264 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI----------KN 50 M + + +A + +L ++++N++N +TVG++ V F E+V + Sbjct: 1 MLRALWNSKSGLIAQQNKLDSISNNLANVNTVGYKREDVSFQELVQETLKRKGYPTSDRP 60 Query: 51 DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVT 109 +I A+ + + G ++TG + D A++G +F + P G R G F V Sbjct: 61 EIQTGTGVKATNWIRDTHQQGILLNTGNKTDLAIDGQGFFRVIMPDGNYAYERSGNFVVD 120 Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-----------IATM 158 +G LV +G + + I++ G + + + Sbjct: 121 RNGMLVDENGNRLEIQLQQPAGGQILNRIGGFSKNNINIAEDGSISVKDIDGMNKMVGKI 180 Query: 159 GLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 +Y+ S FV + P + + V++ +GFLE+SN ++ EM +MI + Sbjct: 181 NIYNAVGSDAFVSIGRNLYIPQ-EGVNVFTNNDVSILQGFLENSNVDAGKEMTEMIITQR 239 Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242 F + I ++ M + N+ Sbjct: 240 AFELSSRGIKTADE-MWGIVNNMR 262 >gi|332525065|ref|ZP_08401245.1| flagellar basal-body rod protein FlgF [Rubrivivax benzoatilyticus JA2] gi|332108354|gb|EGJ09578.1| flagellar basal-body rod protein FlgF [Rubrivivax benzoatilyticus JA2] Length = 240 Score = 151 bits (380), Expect = 9e-35, Method: Composition-based stats. Identities = 55/244 (22%), Positives = 91/244 (37%), Gaps = 5/244 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A +R +A+N++N T GFR F V ++ D + Sbjct: 1 MDRLIYLSMGGAKATMERQDVLANNLANASTTGFRAELQAFRAV--PVRGDGASTRVYAL 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119 + G TG LD A+ G +W A++S TR G +V+ +G LV+ SG Sbjct: 59 ESTVGHDDQSGPLQVTGRNLDVAMRGKSWLAVQSLDGTEAYTRAGSMEVSAEGVLVTPSG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 + D + + I G + GK A L V R + Sbjct: 119 LPVLGDGGPITVPANATLTIGADGTVSAAANGGKPQAIGRLKLVTPEAPLTRGTDGLFRA 178 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 P ++ G LE SN + + M QMI ++F ++ E+ A + Sbjct: 179 ADGDLP--ADPAARLQDGALEGSNVSPVETMVQMISAARQFEQQIKMLQTAEQKEQGATK 236 Query: 240 NIAS 243 +A+ Sbjct: 237 LLAT 240 >gi|258621050|ref|ZP_05716084.1| flagellar basal-body rod protein FlgF [Vibrio mimicus VM573] gi|258625278|ref|ZP_05720186.1| flagellar basal-body rod protein FlgF [Vibrio mimicus VM603] gi|262166281|ref|ZP_06034018.1| flagellar basal-body rod protein FlgF [Vibrio mimicus VM223] gi|262170826|ref|ZP_06038504.1| flagellar basal-body rod protein FlgF [Vibrio mimicus MB-451] gi|258582451|gb|EEW07292.1| flagellar basal-body rod protein FlgF [Vibrio mimicus VM603] gi|258586438|gb|EEW11153.1| flagellar basal-body rod protein FlgF [Vibrio mimicus VM573] gi|261891902|gb|EEY37888.1| flagellar basal-body rod protein FlgF [Vibrio mimicus MB-451] gi|262025997|gb|EEY44665.1| flagellar basal-body rod protein FlgF [Vibrio mimicus VM223] Length = 249 Score = 151 bits (380), Expect = 9e-35, Method: Composition-based stats. Identities = 56/241 (23%), Positives = 102/241 (42%), Gaps = 11/241 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + ++ Q + A+N++N T GFR + + + F Sbjct: 1 MDRALFLAMSGAKQNMQAMQLRANNLANVSTTGFRADLAQARSM--QAYGEGLPTRVFSM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASG 119 + + + GS I+TG +LD ++G+ W ++ + LTR+G ++ + G L++ +G Sbjct: 59 TERPGHNFAQGSVITTGRDLDITIQGEGWISVLDKTGKEGLTRNGNLRIDETGLLLNGNG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172 +PVL PI +P +G G IS + + + VD Q + Sbjct: 119 -HPVLGETGAPITLPVPLTKVEIGGDGTISVRPQGAPADAMEVVDRIKLVRLNDQALFKD 177 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 N P T E + V + G LE SN N++ EM +I L ++F ++ E+ Sbjct: 178 VNGLFRATDPNTQFEADASVKILTGALEGSNVNAIGEMTSLIDLQRQFEMQVKMMSTAEE 237 Query: 233 S 233 Sbjct: 238 M 238 >gi|326404069|ref|YP_004284151.1| flagellar basal-body rod protein FlgG [Acidiphilium multivorum AIU301] gi|325050931|dbj|BAJ81269.1| flagellar basal-body rod protein FlgG [Acidiphilium multivorum AIU301] Length = 260 Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats. Identities = 42/259 (16%), Positives = 91/259 (35%), Gaps = 21/259 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + +I A + + +++N++N T G++ +V F +++ Sbjct: 1 MRALDIAATGMQAQQTNVEVISNNIANMTTTGYKAQRVAFQDLLYQDLRRAGSNSSDAGT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q V + Y + G+ T LD A+ G+ WF + P TRDG F Sbjct: 61 IVPSGTQIGLGVKTAAIYRIDQQGNLQQTNNTLDMAISGNGWFQVTLPSGQTAYTRDGTF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 ++ +G++V+A G + V + + + L Sbjct: 121 GLSPNGTIVTADGYVVQPGIQIPTNATNVTINASGQVQVSLPGQTAPQTVGQLQLAVFPN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + TV +GF+E+SN N + E+ +I + + Sbjct: 181 DAGLAAQGGNLFLQTAASGNPVTGAPSAPGFGTVMQGFVENSNVNVVSEVTDLITAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + + ++ + + + Sbjct: 241 DMNSQVVTATNQMLSTLTQ 259 >gi|226950051|ref|YP_002805142.1| flagellar basal body rod protein [Clostridium botulinum A2 str. Kyoto] gi|226842618|gb|ACO85284.1| flagellar basal body rod protein [Clostridium botulinum A2 str. Kyoto] Length = 255 Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats. Identities = 54/258 (20%), Positives = 98/258 (37%), Gaps = 20/258 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKF---SEVVGAI--------- 48 M S ++ ++LE + T++ N+SN TVG+++ + F +V+ Sbjct: 1 MIRSLYTAVSGMISLEAKQDTISANLSNASTVGYKSTNLAFKKFEDVLMENYDKKLGNKN 60 Query: 49 -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107 +N I + G TG DFALEG +F +E+ TRDG F Sbjct: 61 IQNIIGGLSMGNKIDEVNNLFTQGIIQDTGKPTDFALEGRGFFTIENNGRNYYTRDGHFH 120 Query: 108 VTDDGSLVSASGKYPVL--DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 V G LV+ SG + I ++ G IS G + + + Sbjct: 121 VDTRGYLVNDSGYNVMGINRNTGAREAIFVGNKTIGTDASGNISLNGVPSYSFQVADFND 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225 + ++ N P V++ LE SN N EM M+ + F + Sbjct: 181 YNSLKKIGDNLFEGNNPQNIN-----GIVRQNSLEKSNVNVTNEMVNMLTTMRSFETNQK 235 Query: 226 LIDENEKSMLEAIRNIAS 243 ++ ++++ + + + + Sbjct: 236 IVQSIDETLGKTVNEVGA 253 >gi|320354341|ref|YP_004195680.1| flagellar hook-basal body protein [Desulfobulbus propionicus DSM 2032] gi|320122843|gb|ADW18389.1| flagellar hook-basal body protein [Desulfobulbus propionicus DSM 2032] Length = 244 Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats. Identities = 52/244 (21%), Positives = 97/244 (39%), Gaps = 3/244 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI-SFV 59 M + L+ +A EQ +S VA N++N T GF+ ++ F+ ++ + D + +F Sbjct: 1 MGSGKYSALSGAVAREQAMSNVAANLANVSTTGFKKDRISFAAILRGAQQASDARGINFA 60 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119 K + G T LD A++G +F + TR GR + D+G + + G Sbjct: 61 RIRKIGVDFSQGGMQPTDRPLDVAIDGPGFFKVRKGGETFYTRSGRLMLDDNGMVKTEDG 120 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 + + + E G+IS G + Q +++ + + Sbjct: 121 LNVLGAGNEPLQIDTALGKDIVIAESGDISVAGTLTGNRIQVFAVPDQDKLKKAGNALYA 180 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + L+ V +G LE SN N + EM M+ + F + ++ K + E Sbjct: 181 LEEG-GDQPLADYRVLQGSLETSNVNMIEEMTAMVDTQRTFEAHLKALESYSK-LGEKQD 238 Query: 240 NIAS 243 + S Sbjct: 239 ELGS 242 >gi|299131785|ref|ZP_07024980.1| flagellar basal-body rod protein FlgG [Afipia sp. 1NLS2] gi|298591922|gb|EFI52122.1| flagellar basal-body rod protein FlgG [Afipia sp. 1NLS2] Length = 262 Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats. Identities = 37/258 (14%), Positives = 83/258 (32%), Gaps = 21/258 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55 + A E + +++N++N T G++ F +++ + + Sbjct: 1 MRALYTAATGMAAQELSVQVISNNIANLRTTGYKKQMASFQDLLYEHVQRVGAQASDQGT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 V + G+ G +L+ A+ G+ +F ++ P TRDG F Sbjct: 61 VLPVGIDIGGGVKTVGTPRLMTQGTLSPVGGDLNVAVRGEGYFKIQLPDSTYAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165 G +V+A G ++ S V+ + L Sbjct: 121 TTDGQGRIVNAQGNLVQPTISIPQNASQLTINAQGQVSVILPGSTTPSVLGQITLTRFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ + P +D +++G LE +N + E+ +I + + Sbjct: 181 KAGLQSIGDNLFTDTPASGPPQDGLANADGFGDIQQGNLEQANVEVVSEISDLIAAQRAY 240 Query: 221 NSITTLIDENEKSMLEAI 238 ++ ++ M Sbjct: 241 EMNAKVVSAADQMMQSTT 258 >gi|221635450|ref|YP_002523326.1| flagellar basal-body rod protein FlgF (Putative proximal rod protein) [Thermomicrobium roseum DSM 5159] gi|221157298|gb|ACM06416.1| flagellar basal-body rod protein FlgF (Putative proximal rod protein) [Thermomicrobium roseum DSM 5159] Length = 248 Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats. Identities = 58/250 (23%), Positives = 100/250 (40%), Gaps = 15/250 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVV-----GAIKNDI 52 M + A +A R T+A N++N +T G+R + F ++ + I Sbjct: 1 MIRTIYQAAAGMMAQFARQLTLATNLANIETPGYRQQESTIRDFQQMFLLRLGRGEASPI 60 Query: 53 DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDG 112 + V K + GS I TG LD AL G A+FA+++P G+ TRDGRF++ Sbjct: 61 GTLSTAVRWDKPLVDLRQGSLIETGRPLDLALAGRAFFAIQTPDGVEYTRDGRFQLDAQR 120 Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172 LV+A G + + V G I +V+ + L F Sbjct: 121 RLVTADGHPVL----GEQGPLVLPAGDIWVEPDGTILVGEQVVGRLLLVEFPPDAQFEPV 176 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 + + P E V +GFLE SN + + M+ T+ + + ++ Sbjct: 177 AGNRYRTDATGAPSET---TGVSQGFLEASNVDLTQTLTDMLAATRSYQLAARSLQLADE 233 Query: 233 SMLEAIRNIA 242 ++ A+ ++ Sbjct: 234 TLRLAVNSVG 243 >gi|148380595|ref|YP_001255136.1| flagellar basal body rod protein [Clostridium botulinum A str. ATCC 3502] gi|153933262|ref|YP_001384882.1| flagellar basal body rod protein FlgG [Clostridium botulinum A str. ATCC 19397] gi|153935902|ref|YP_001388351.1| flagellar basal body rod protein FlgG [Clostridium botulinum A str. Hall] gi|168180938|ref|ZP_02615602.1| flagellar basal body rod protein [Clostridium botulinum NCTC 2916] gi|148290079|emb|CAL84198.1| putative flagellar basal-body rod protein [Clostridium botulinum A str. ATCC 3502] gi|152929306|gb|ABS34806.1| flagellar basal body rod protein [Clostridium botulinum A str. ATCC 19397] gi|152931816|gb|ABS37315.1| flagellar basal body rod protein [Clostridium botulinum A str. Hall] gi|182668229|gb|EDT80208.1| flagellar basal body rod protein [Clostridium botulinum NCTC 2916] Length = 263 Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats. Identities = 49/264 (18%), Positives = 107/264 (40%), Gaps = 24/264 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI----------KN 50 M + + +A + +L ++++N++N +TVG++ V F E+V + Sbjct: 1 MLRALWNSKSGLIAQQNKLDSISNNLANVNTVGYKREDVSFQELVQETLKRKGYPTSDRP 60 Query: 51 DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVT 109 +I A+ + + G+ ++TG + D A++G +F + G R G F + Sbjct: 61 EIQTGTGVKATNWIRDTHQQGALLTTGNKTDLAIDGQGFFRVIMADGDYAYERSGNFLID 120 Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-----------IATM 158 +G LV +G + + I++ G + + + Sbjct: 121 RNGMLVDENGNALDIQLQQPEGMQILNRIGGFDANNINIAEDGSISVRDTDGLNKVVGKI 180 Query: 159 GLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 +Y+ + F+ + P + + V++ +GFLE+SN ++ EM +MI + Sbjct: 181 NIYNAVGADAFLSIGRNLYLP-RDGVNVFVNNDVSILQGFLENSNVDAGKEMTEMIITQR 239 Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242 F + I ++ M + N+ Sbjct: 240 AFELSSRGIKTADE-MWGIVNNMR 262 >gi|167579489|ref|ZP_02372363.1| flagellar basal body rod protein FlgF [Burkholderia thailandensis TXDOH] Length = 253 Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats. Identities = 54/250 (21%), Positives = 85/250 (34%), Gaps = 10/250 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-----QK 55 M + ++ S VA+N++N T GFR F V ++ Sbjct: 1 MDRLIYTAMTGATQSLEQQSVVANNLANASTTGFRAQLATFRAVPMNFEDGSGNVDPATT 60 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSL 114 ++ S G TG LD A++G W ++ P TR G V +G L Sbjct: 61 RTYTLSSTPGADFAPGPIERTGNPLDVAIQGPGWLSVMLPDGSEAYTRAGNLHVDQNGQL 120 Query: 115 VSASGKYPVLDMAS---VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171 V+A+ V + P V V L V+ ++ Sbjct: 121 VTANNLPVVGNGGPLAVPPNSQLTIGADGTVSALMPGDPPTAVAMIDQLKLVNPDPATMK 180 Query: 172 RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 R + G+ P + V V LE SN N + M MI + F T LI + Sbjct: 181 RGDDGLFRTADGNPADADPAVKVVPNSLEGSNVNPVAAMVSMIDNARAFELQTKLIQSAD 240 Query: 232 KSMLEAIRNI 241 ++ +A + Sbjct: 241 QN-EQAANQL 249 >gi|15642195|ref|NP_231827.1| flagellar basal body rod protein FlgF [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121586260|ref|ZP_01676050.1| flagellar basal-body rod protein FlgF [Vibrio cholerae 2740-80] gi|121726526|ref|ZP_01679775.1| flagellar basal-body rod protein FlgF [Vibrio cholerae V52] gi|147673274|ref|YP_001217713.1| flagellar basal body rod protein FlgF [Vibrio cholerae O395] gi|153213604|ref|ZP_01948877.1| flagellar basal-body rod protein FlgF [Vibrio cholerae 1587] gi|153817120|ref|ZP_01969787.1| flagellar basal-body rod protein FlgF [Vibrio cholerae NCTC 8457] gi|153820819|ref|ZP_01973486.1| flagellar basal-body rod protein FlgF [Vibrio cholerae B33] gi|153825314|ref|ZP_01977981.1| flagellar basal-body rod protein FlgF [Vibrio cholerae MZO-2] gi|153829346|ref|ZP_01982013.1| flagellar basal-body rod protein FlgF [Vibrio cholerae 623-39] gi|183179566|ref|ZP_02957777.1| flagellar basal-body rod protein FlgF [Vibrio cholerae MZO-3] gi|227082320|ref|YP_002810871.1| flagellar basal-body rod protein FlgF [Vibrio cholerae M66-2] gi|229507727|ref|ZP_04397232.1| flagellar basal-body rod protein FlgF [Vibrio cholerae BX 330286] gi|229512078|ref|ZP_04401557.1| flagellar basal-body rod protein FlgF [Vibrio cholerae B33] gi|229513840|ref|ZP_04403302.1| flagellar basal-body rod protein FlgF [Vibrio cholerae TMA 21] gi|229519214|ref|ZP_04408657.1| flagellar basal-body rod protein FlgF [Vibrio cholerae RC9] gi|229522145|ref|ZP_04411562.1| flagellar basal-body rod protein FlgF [Vibrio cholerae TM 11079-80] gi|229524191|ref|ZP_04413596.1| flagellar basal-body rod protein FlgF [Vibrio cholerae bv. albensis VL426] gi|229528799|ref|ZP_04418189.1| flagellar basal-body rod protein FlgF [Vibrio cholerae 12129(1)] gi|229607231|ref|YP_002877879.1| flagellar basal body rod protein FlgF [Vibrio cholerae MJ-1236] gi|254225802|ref|ZP_04919407.1| flagellar basal-body rod protein FlgF [Vibrio cholerae V51] gi|254849325|ref|ZP_05238675.1| flagellar basal-body rod protein FlgF [Vibrio cholerae MO10] gi|255747105|ref|ZP_05421050.1| flagellar basal-body rod protein FlgF [Vibrio cholera CIRS 101] gi|262161351|ref|ZP_06030461.1| flagellar basal-body rod protein FlgF [Vibrio cholerae INDRE 91/1] gi|262167778|ref|ZP_06035480.1| flagellar basal-body rod protein FlgF [Vibrio cholerae RC27] gi|262191688|ref|ZP_06049864.1| flagellar basal-body rod protein FlgF [Vibrio cholerae CT 5369-93] gi|297580842|ref|ZP_06942767.1| flagellar basal-body rod protein FlgF [Vibrio cholerae RC385] gi|298500426|ref|ZP_07010231.1| flagellar basal-body rod protein FlgF [Vibrio cholerae MAK 757] gi|9656752|gb|AAF95341.1| flagellar basal-body rod protein FlgF [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121549526|gb|EAX59552.1| flagellar basal-body rod protein FlgF [Vibrio cholerae 2740-80] gi|121630979|gb|EAX63358.1| flagellar basal-body rod protein FlgF [Vibrio cholerae V52] gi|124115803|gb|EAY34623.1| flagellar basal-body rod protein FlgF [Vibrio cholerae 1587] gi|125621708|gb|EAZ50037.1| flagellar basal-body rod protein FlgF [Vibrio cholerae V51] gi|126512388|gb|EAZ74982.1| flagellar basal-body rod protein FlgF [Vibrio cholerae NCTC 8457] gi|126521611|gb|EAZ78834.1| flagellar basal-body rod protein FlgF [Vibrio cholerae B33] gi|146315157|gb|ABQ19696.1| flagellar basal-body rod protein FlgF [Vibrio cholerae O395] gi|148875187|gb|EDL73322.1| flagellar basal-body rod protein FlgF [Vibrio cholerae 623-39] gi|149740998|gb|EDM55067.1| flagellar basal-body rod protein FlgF [Vibrio cholerae MZO-2] gi|183012977|gb|EDT88277.1| flagellar basal-body rod protein FlgF [Vibrio cholerae MZO-3] gi|227010208|gb|ACP06420.1| flagellar basal-body rod protein FlgF [Vibrio cholerae M66-2] gi|227014092|gb|ACP10302.1| flagellar basal-body rod protein FlgF [Vibrio cholerae O395] gi|229332573|gb|EEN98059.1| flagellar basal-body rod protein FlgF [Vibrio cholerae 12129(1)] gi|229337772|gb|EEO02789.1| flagellar basal-body rod protein FlgF [Vibrio cholerae bv. albensis VL426] gi|229341070|gb|EEO06075.1| flagellar basal-body rod protein FlgF [Vibrio cholerae TM 11079-80] gi|229343903|gb|EEO08878.1| flagellar basal-body rod protein FlgF [Vibrio cholerae RC9] gi|229349021|gb|EEO13978.1| flagellar basal-body rod protein FlgF [Vibrio cholerae TMA 21] gi|229352043|gb|EEO16984.1| flagellar basal-body rod protein FlgF [Vibrio cholerae B33] gi|229355232|gb|EEO20153.1| flagellar basal-body rod protein FlgF [Vibrio cholerae BX 330286] gi|229369886|gb|ACQ60309.1| flagellar basal-body rod protein FlgF [Vibrio cholerae MJ-1236] gi|254845030|gb|EET23444.1| flagellar basal-body rod protein FlgF [Vibrio cholerae MO10] gi|255735507|gb|EET90907.1| flagellar basal-body rod protein FlgF [Vibrio cholera CIRS 101] gi|262023843|gb|EEY42542.1| flagellar basal-body rod protein FlgF [Vibrio cholerae RC27] gi|262028662|gb|EEY47316.1| flagellar basal-body rod protein FlgF [Vibrio cholerae INDRE 91/1] gi|262032427|gb|EEY50989.1| flagellar basal-body rod protein FlgF [Vibrio cholerae CT 5369-93] gi|297534668|gb|EFH73504.1| flagellar basal-body rod protein FlgF [Vibrio cholerae RC385] gi|297541119|gb|EFH77173.1| flagellar basal-body rod protein FlgF [Vibrio cholerae MAK 757] gi|327484715|gb|AEA79122.1| Flagellar basal-body rod protein FlgF [Vibrio cholerae LMA3894-4] Length = 249 Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats. Identities = 57/241 (23%), Positives = 102/241 (42%), Gaps = 11/241 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + ++ Q + A+N++N T GFR + + + F Sbjct: 1 MDRALFLAMSGAKQNMQAMQLRANNLANVSTTGFRADLAQARSM--QAYGEGLPSRVFSM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASG 119 + + + GS I+TG +LD ++GD W ++ + LTR+G ++ + G L++ +G Sbjct: 59 TERPGHNFAQGSVITTGRDLDITIQGDGWISVLDKTGKEGLTRNGNLRIDETGLLLNGNG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172 +PVL PI +P +G G IS + + + VD Q + Sbjct: 119 -HPVLGETGAPITLPVPLNKVEIGGDGTISVRPQGAPADAMEVVDRIKLVRLNDQSLFKD 177 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 N P T E + V + G LE SN N++ EM +I L ++F ++ E+ Sbjct: 178 VNGLFRATDPNTQFEADASVKILTGALEGSNVNAIGEMTSLIDLQRQFEMQVKMMSTAEE 237 Query: 233 S 233 Sbjct: 238 M 238 >gi|167645396|ref|YP_001683059.1| flagellar basal body rod protein FlgG [Caulobacter sp. K31] gi|167347826|gb|ABZ70561.1| flagellar basal-body rod protein FlgG [Caulobacter sp. K31] Length = 262 Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats. Identities = 41/259 (15%), Positives = 86/259 (33%), Gaps = 21/259 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + A + + +++N++N +TVGF+ + +F +++ Sbjct: 1 MQALRTAATGMAAQQLNVEVISNNIANMNTVGFKRGRAEFQDLLYQTIERAGAQSSGDGN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q V +G Y E G+ T E D A++G + + P TR G F Sbjct: 61 VVPTGVQVGGGVKTGSVYRIHEQGTPTMTNNEFDVAIQGKGFLQILLPSGETAYTRAGNF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFN-VGEKGEISQKGKVIATMGLYSVDM 165 D G +V+ G + V K + + + + + L + Sbjct: 121 STNDQGQIVTEDGYTVQPGITIPANATATIISKTGLVQVKMDGNPAPQTVGQLELANFMN 180 Query: 166 SQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G N+ T+ + + E SN +S+ E+ +I + + Sbjct: 181 EGGLEAIGNNMYMETAASGAANIAAPGQQGFGTLLQNYTEASNVDSVSEITSLIVAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + +I ++ + Sbjct: 241 EMNSKVITTADQMLQTTSN 259 >gi|317153845|ref|YP_004121893.1| flagellar hook-basal body protein [Desulfovibrio aespoeensis Aspo-2] gi|316944096|gb|ADU63147.1| flagellar hook-basal body protein [Desulfovibrio aespoeensis Aspo-2] Length = 257 Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats. Identities = 58/258 (22%), Positives = 104/258 (40%), Gaps = 20/258 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-------- 52 M+ S L L+ E R+S++A+N++N +T F+ + F +V +D Sbjct: 1 MRDSSLSALFGALSNEMRMSSIANNLANVNTTAFKKDHMAFHDVFTRFAHDYVVTTKSFL 60 Query: 53 --------DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDG 104 + ++ + + G TG +LDFAL G+ +F + + TR G Sbjct: 61 RDQDLFPDPKIMAKARLSDQTVDFSQGGMHQTGNQLDFALSGEGFFKAQVGGDELYTRAG 120 Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 F V DG+LV+ G +++ + + + V G IS G+ L + + Sbjct: 121 NFLVDVDGTLVTQDGHPVMVEGGPLSV---PPGAVMTVESDGMISINGEPAGAFDLVTFE 177 Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224 G R ++ E +TV++GFLE N + EM QMI + F+ Sbjct: 178 DLGGMERVGSNFYRAPGDAAEAEP-EDLTVQQGFLEKGNVEVVTEMVQMIETQRAFDMYA 236 Query: 225 TLIDENEKSMLEAIRNIA 242 ++ + I + Sbjct: 237 KVLQGTDSLDRNMITKVG 254 >gi|83720527|ref|YP_440802.1| flagellar basal body rod protein FlgF [Burkholderia thailandensis E264] gi|167617586|ref|ZP_02386217.1| flagellar basal body rod protein FlgF [Burkholderia thailandensis Bt4] gi|257140547|ref|ZP_05588809.1| flagellar basal body rod protein FlgF [Burkholderia thailandensis E264] gi|83654352|gb|ABC38415.1| flagellar basal-body rod protein FlgF [Burkholderia thailandensis E264] Length = 253 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 54/250 (21%), Positives = 85/250 (34%), Gaps = 10/250 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-----QK 55 M + ++ S VA+N++N T GFR F V ++ Sbjct: 1 MDRLIYTAMTGATQSLEQQSVVANNLANASTTGFRAQLATFRAVPMNFEDGSGNVDPATT 60 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSL 114 ++ S G TG LD A++G W ++ P TR G V +G L Sbjct: 61 RTYTLSSTPGADFAPGPIERTGNPLDVAIQGPGWLSVMLPDGSEAYTRAGNLHVDQNGQL 120 Query: 115 VSASGKYPVLDMAS---VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171 V+A+ V + P V V L V+ ++ Sbjct: 121 VTANNLPVVGNGGPLAVPPNAQLTIGADGTVSALMPGDPPTAVAMIDQLKLVNPDPATMK 180 Query: 172 RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 R + G+ P + V V LE SN N + M MI + F T LI + Sbjct: 181 RGDDGLFRTADGNPADADPAVKVVPNSLEGSNVNPVAAMVSMIDNARAFELQTKLIQSAD 240 Query: 232 KSMLEAIRNI 241 ++ +A + Sbjct: 241 QN-EQAANQL 249 >gi|303239788|ref|ZP_07326312.1| fagellar hook-basal body protein [Acetivibrio cellulolyticus CD2] gi|302592725|gb|EFL62449.1| fagellar hook-basal body protein [Acetivibrio cellulolyticus CD2] Length = 259 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 53/263 (20%), Positives = 101/263 (38%), Gaps = 26/263 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M + + A +++ +++N++N T G++ V + A+ Sbjct: 1 MIRALYTSGWSMNANNKQMDVISNNLANVSTNGYKKDTVVYESFPNALVRRVNDTESTLN 60 Query: 49 -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFAL--EGDAWFALESPRG-----IIL 100 + G+ + G STG LD A+ A+F + P Sbjct: 61 PSGKVGDVQLGNDVGQVFTYYTSGQLASTGNNLDLAIGSSDSAFFTIGVPSENGELTEYY 120 Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 TRDG F + LV++ G + I + E F+V + G I Q G+V+ + + Sbjct: 121 TRDGSFCLNSAKQLVTSEGYMVMGTD----GPITLESENFSVLDDGSIVQNGQVVDKLAI 176 Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 + + + I E VK+G+LE SN N + EM MI + + + Sbjct: 177 KDFTDTSTLRKFGENLIQTTEET--QEQEFNGVVKQGYLEQSNVNVVNEMINMITVMRAY 234 Query: 221 NSITTLIDENEKSMLEAIRNIAS 243 S +I + ++ +A+ + + Sbjct: 235 ESNQKVIQALDGTLEKAVNEVGA 257 >gi|94969950|ref|YP_591998.1| flagellar basal-body rod FlgG [Candidatus Koribacter versatilis Ellin345] gi|94552000|gb|ABF41924.1| Flagellar basal-body rod FlgG [Candidatus Koribacter versatilis Ellin345] Length = 263 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 46/258 (17%), Positives = 90/258 (34%), Gaps = 21/258 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK----------- 49 M + A + L +A+N+SN T GFR +++F +++ Sbjct: 1 MFRALYTAATGMTAQQLNLDNIANNLSNASTAGFRARRLQFQDLMYQNMVVPGSAATQQT 60 Query: 50 --NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 Q + G F STG LD A++G +F + P G TR G+F Sbjct: 61 TVASGLQVGLGTRPTASETLQTQGEFESTGNPLDIAIQGQGFFQVLLPDGTTGYTRSGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 + G++V++ G + V + + + ++ + S Sbjct: 121 HLDAQGNVVTSDGNQLQPSLTIPADAQTISIGADGTVTVTQPGQTQAQQVGSIQVASFAN 180 Query: 166 SQGFVRRENSGISPNIP------PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G + TP T+++G LE +N + + E QMI + Sbjct: 181 PGGLNSIGKNLFLATTASGDPTIGTPGGAEGAGTLQQGVLEQANVSVVDEFIQMILAQRS 240 Query: 220 FNSITTLIDENEKSMLEA 237 + + + ++ + + Sbjct: 241 YEANSKVVTAANEMLQNL 258 >gi|302343756|ref|YP_003808285.1| flagellar basal-body rod protein FlgF [Desulfarculus baarsii DSM 2075] gi|301640369|gb|ADK85691.1| flagellar basal-body rod protein FlgF [Desulfarculus baarsii DSM 2075] Length = 231 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 56/242 (23%), Positives = 99/242 (40%), Gaps = 17/242 (7%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 L + + A+N++N T GF+ ++ F +++ Sbjct: 4 DQGLADAACGSLMQIRHMDVTANNLANVSTTGFKGDRLIFDDMLSR-------------- 49 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 + + GS TG LD AL GD +F + +P G LTR G FK+ +G+LV++ G Sbjct: 50 -EMQVDFSQGSLQETGNPLDVALSGDGFFMIRTPGGDRLTRSGAFKMDANGALVTSEGHA 108 Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR-ENSGISPN 180 LD A P+ + + +G +SQ G +AT+ + V + + + Sbjct: 109 V-LDSAGQPVTLNPSGGQVFIDSEGNVSQDGAQVATLAVVEVQNKAALQKDGRTAFSGAD 167 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 P + V V +G LE SN + +M MI + F S + ++ +A+ Sbjct: 168 GQLPPTAPAADVVVNQGSLEMSNVTVVDQMVNMITAQRAFESYQKAVHSLQEIDQKAVSQ 227 Query: 241 IA 242 + Sbjct: 228 VG 229 >gi|161367438|ref|YP_868965.2| flagellar basal body rod protein FlgF [Shewanella sp. ANA-3] Length = 247 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 48/238 (20%), Positives = 90/238 (37%), Gaps = 7/238 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M I ++ L+ A+N++N +T GF++ + + + F Sbjct: 1 MDKFLYISMSGAKQNMNELALRANNLANANTDGFKSDMAQARSM--QAFGEGLPTRVFAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASG 119 + G STG +LD A++GD WFA++ TR G G L + G Sbjct: 59 VETPSANFRSGPIKSTGRDLDVAIKGDGWFAVQAQDGSEAYTRSGSLSFDSTGLLHNDRG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 + D + + +P + + + +G + V+ + R Sbjct: 119 NPVMGDAGPIVLPLPIEKVTISQDGIISVRPQGATTEVVEEVGRLKLVNPGNAQMMRGED 178 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 G+ + P V V+ G +E SN N + EM +I L ++F ++ E++ Sbjct: 179 GLFRLVSGDPAPADPSVFVESGAVEGSNVNPVDEMVSLIDLQRQFELQVKMMKTAEEN 236 >gi|15644291|ref|NP_229343.1| flagellar basal-body rod protein FlgF [Thermotoga maritima MSB8] gi|170288995|ref|YP_001739233.1| hypothetical protein TRQ2_1206 [Thermotoga sp. RQ2] gi|281412685|ref|YP_003346764.1| flagellar basal-body rod protein FlgF [Thermotoga naphthophila RKU-10] gi|4982110|gb|AAD36610.1|AE001800_20 flagellar basal-body rod protein FlgF [Thermotoga maritima MSB8] gi|170176498|gb|ACB09550.1| protein of unknown function DUF1078 domain protein [Thermotoga sp. RQ2] gi|281373788|gb|ADA67350.1| flagellar basal-body rod protein FlgF [Thermotoga naphthophila RKU-10] Length = 249 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 49/257 (19%), Positives = 99/257 (38%), Gaps = 24/257 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS-----EVVGAIKNDIDQK 55 M L +L +A++++N DT G++ + F EV N ++ + Sbjct: 1 MTRGIYNAAMGMLVDMAKLDRIANDLANVDTAGYKQDREAFRAYLRREVFRQEPNPVESR 60 Query: 56 ISFVAS---------GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106 V + G T A+ G+ +F +E G TR+G F Sbjct: 61 TKKVPIGPLEYATVLDEVRTDLSQGPVEETDVPYHLAINGEGFFRIEFNGGEYYTRNGEF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 V +G +V+ G Y LD ++ + G G ++ +G+Y+++ Sbjct: 121 TVNSEGYIVTNYGGYL-LDENGERVRFFDDFTVDEEGYV--RDAYGNIVTRIGVYNLENP 177 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 + F +G +P+ + +G++E SN +++ M MI + + Sbjct: 178 EKFGNTLFTGENPS-------PSENFRIMQGYVEKSNVDALKAMVDMISAMRHYELSQRA 230 Query: 227 IDENEKSMLEAIRNIAS 243 + N++ + I ++AS Sbjct: 231 VTVNDELNGKLINSLAS 247 >gi|161349955|ref|YP_733400.2| flagellar basal body rod protein FlgF [Shewanella sp. MR-4] gi|161367434|ref|YP_737389.2| flagellar basal body rod protein FlgF [Shewanella sp. MR-7] Length = 247 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 47/238 (19%), Positives = 90/238 (37%), Gaps = 7/238 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M I ++ L+ A+N++N +T GF++ + + + F Sbjct: 1 MDKFLYISMSGAKQNMNELALRANNLANANTDGFKSDMAQARSM--QAFGEGLPSRVFAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASG 119 + G +TG +LD A++GD WFA++ TR G G L + G Sbjct: 59 VETPSANFRAGPIKTTGRDLDVAIKGDGWFAVQAKDGSEAYTRSGSLSFDSTGLLHNDRG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 + D + + +P + + + +G + V+ + R Sbjct: 119 NPVMGDAGPIVLPLPIEKVTISQDGIISVRPQGATTEVIEEVGRLKLVNPGNAQMMRGED 178 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 G+ + P V V+ G +E SN N + EM +I L ++F ++ E++ Sbjct: 179 GLFRLVSGDPAPADPNVFVESGAVEGSNVNPVDEMVSLIDLQRQFELQVKMMKTAEEN 236 >gi|257871297|ref|ZP_05650950.1| flagellar hook protein [Enterococcus gallinarum EG2] gi|257805461|gb|EEV34283.1| flagellar hook protein [Enterococcus gallinarum EG2] Length = 312 Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 50/295 (16%), Positives = 109/295 (36%), Gaps = 56/295 (18%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50 M S G++ L+ ++ V++N++N +TVGF++ +V F +++ + Sbjct: 15 MLRSLYSGVSGMKNLQTKMDVVSNNIANVNTVGFKSSRVLFQDMMSQTMSNATAPGNGLG 74 Query: 51 --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---RGIILTRDGR 105 + Q V +G VG+ STG +DF + G +F ++ P TRDG Sbjct: 75 GINATQIGLGVQTGSIDTINTVGAPQSTGRSMDFYISGQGYFMVQGPGANGETYYTRDGA 134 Query: 106 FKVTDDGSLVSASGKYPVL-DMASVPIQIPQKDEIFNVGEKGEIS--------------- 149 F +G+L ++ G + + + + N G+ + Sbjct: 135 FVRDSNGTLTNSDGMQVLGRSVTGGQPVVYDDNFDENTALSGQETVSPLSIPSTLTVNGE 194 Query: 150 --------------------QKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP-----T 184 + V+ +G+ + + +G + + Sbjct: 195 TLTYNSMAIDANGLVLAKYGNQTFVMGKVGVATFNNPEGLEKVGGNNYVQTSNSGNPIVA 254 Query: 185 PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + T++ G LE SN + E +MI ++ + + + I +++ + E + Sbjct: 255 GPGNNGAGTLQAGALEMSNVDLSTEFTEMIIASRAYQANSRSITTSDEMLQELLN 309 >gi|329888225|ref|ZP_08266823.1| flagellar basal-body rod protein FlgF [Brevundimonas diminuta ATCC 11568] gi|328846781|gb|EGF96343.1| flagellar basal-body rod protein FlgF [Brevundimonas diminuta ATCC 11568] Length = 245 Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 66/245 (26%), Positives = 117/245 (47%), Gaps = 6/245 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK--NDIDQKISF 58 M+ + IGL+ Q+ L + L VA+N++N DT GF+ ++ VG ++I SF Sbjct: 1 MENAAYIGLSRQMTLRRELDIVANNVANADTTGFKVEQLMVGTEVGQRARNDNIRPSASF 60 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGD-AWFALESPRGIILTRDGRFKVTDDGSLVSA 117 V G+ TG ELDF +EG+ A+F +++P G TRDG F +G L + Sbjct: 61 VLDKGVGRDFGQGTLKQTGRELDFGIEGEGAFFTVQTPSGPAYTRDGAFVTDPEGRLTTK 120 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177 G + D I + + +VG G ISQ+G+ + + + D ++ G+ Sbjct: 121 QGLPVLAD--GAEIVLDPQRGPASVGADGTISQEGQPVGRLTVVRFDALSVL-QKSGDGL 177 Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 N D + V++G LE SN N++ E+ +I +++ + +T +I+ + Sbjct: 178 YRNASNAQPMDATDAQVRQGMLEGSNVNTLVEITNLIEISRAYERVTKMIENANDLSRRS 237 Query: 238 IRNIA 242 + + Sbjct: 238 VERLG 242 >gi|291540627|emb|CBL13738.1| fagellar hook-basal body proteins [Roseburia intestinalis XB6B4] Length = 272 Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 46/269 (17%), Positives = 98/269 (36%), Gaps = 30/269 (11%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--------- 51 M + +A + + +++N+SN +TVG++ K++F ++ Sbjct: 1 MMRALYTAATGMIAQQSNVDNISNNLSNVNTVGYKQEKMEFKSLLYQTIQTRTTSANGEE 60 Query: 52 ---IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFK 107 Q GS +++ DFA+ GD +FA+ + TR G F Sbjct: 61 KPISAQVGLGTRVASNTSIYTQGSLMASENATDFAISGDGFFAVRGADGKTYYTRAGDFV 120 Query: 108 VT-----------DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156 + ++G V S P+ A + + E +G + Sbjct: 121 WSVNAGGTLTLCTNEGYPVLDSNNQPINLPAGISAEKVIVSENGKMGYTNAAGTYVDMNQ 180 Query: 157 TMGLYSVDMSQGFVRRENSGISPN------IPPTPLEDLSGVTVKRGFLEDSNANSMYEM 210 T+GL+ + G + + ++ + + +L+ V + +LE SN EM Sbjct: 181 TIGLFQFNNPGGLEKTGTNLLAVTPASGNAMNESTTANLTKSKVLQKYLEGSNVQVADEM 240 Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +I + + + I +++ + +A Sbjct: 241 VNLIIAQRAYQLNSKAITTSDEMLEQANN 269 >gi|240144760|ref|ZP_04743361.1| flagellar basal-body rod protein FlgG [Roseburia intestinalis L1-82] gi|257203281|gb|EEV01566.1| flagellar basal-body rod protein FlgG [Roseburia intestinalis L1-82] gi|291534610|emb|CBL07722.1| fagellar hook-basal body proteins [Roseburia intestinalis M50/1] Length = 272 Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 46/269 (17%), Positives = 98/269 (36%), Gaps = 30/269 (11%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--------- 51 M + +A + + +++N+SN +TVG++ K++F ++ Sbjct: 1 MMRALYTAATGMIAQQSNVDNISNNLSNVNTVGYKQEKMEFKSLLYQTIQTRTTSANGEE 60 Query: 52 ---IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFK 107 Q GS +++ DFA+ GD +FA+ + TR G F Sbjct: 61 KPISAQVGLGTRVASNTSIYTQGSLMASENATDFAISGDGFFAVRGADGKTYYTRAGDFV 120 Query: 108 VT-----------DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156 + ++G V S P+ A + + E +G + Sbjct: 121 WSVNAGGTLTLCTNEGYPVLDSNNQPINLPAGISAEKVIVSENGKMGYTNAAGTYVDMNQ 180 Query: 157 TMGLYSVDMSQGFVRRENSGISPN------IPPTPLEDLSGVTVKRGFLEDSNANSMYEM 210 T+GL+ + G + + ++ + + +L+ V + +LE SN EM Sbjct: 181 TIGLFQFNNPSGLEKTGTNLLAVTPASGNAMNESTTANLTKSKVLQKYLEGSNVQVADEM 240 Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +I + + + I +++ + +A Sbjct: 241 VNLIIAQRAYQLNSKAITTSDEMLEQANN 269 >gi|90411006|ref|ZP_01219020.1| putative flagellar basal-body rod protein FlgF [Photobacterium profundum 3TCK] gi|90328219|gb|EAS44530.1| putative flagellar basal-body rod protein FlgF [Photobacterium profundum 3TCK] Length = 249 Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 59/243 (24%), Positives = 98/243 (40%), Gaps = 11/243 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + ++ + T A+N++N T GFR + + + F Sbjct: 1 MDRALYLAMSGAKQDMYGMQTHANNLANVRTTGFRADLEQARSM--QAYGEGLPSRVFAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + GS ++TG +LD A+EGD W A+ TR G K+ + G L +++G Sbjct: 59 TERPGQDFSQGSVMTTGRDLDVAVEGDGWLAVLDASGQEAYTRAGHLKIDETGMLQNSNG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172 +L PI IP VG G IS + + VD ++ + Sbjct: 119 N-LMLGENGGPIFIPLPINKIQVGNDGTISVLPQGAPPDAMEIVDRLKLVRPDNRDLFKD 177 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 N P + +GVT+ +G LE SN N++ EM MI L + F ++ E+ Sbjct: 178 VNGLFKSKTPGETYDADAGVTLLKGALEGSNVNAVGEMTSMIDLQRHFEMQVKIMKTAEE 237 Query: 233 SML 235 Sbjct: 238 MDQ 240 >gi|168182721|ref|ZP_02617385.1| flagellar basal body rod protein [Clostridium botulinum Bf] gi|237796077|ref|YP_002863629.1| flagellar basal body rod protein FlgG [Clostridium botulinum Ba4 str. 657] gi|182674133|gb|EDT86094.1| flagellar basal body rod protein [Clostridium botulinum Bf] gi|229261217|gb|ACQ52250.1| flagellar basal body rod protein [Clostridium botulinum Ba4 str. 657] Length = 263 Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 51/264 (19%), Positives = 106/264 (40%), Gaps = 24/264 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI----------KN 50 M + + +A + +L ++++N++N +TVG++ V F E+V + Sbjct: 1 MLRALWNSKSGLIAQQNKLDSISNNLANVNTVGYKREDVSFQELVQETLKRKGYPTSDRP 60 Query: 51 DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVT 109 +I A+ + + G ++TG + D A++G +F + G R G F + Sbjct: 61 EIQTGTGVKATNWIRDTHQQGILLNTGNKTDLAIDGQGFFRVIMSDGNYAYERSGNFVID 120 Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-----------IATM 158 +G LV +G + + I++ G + + + Sbjct: 121 RNGMLVDENGNRLEIQLQQPAGGQILNRIGGFSKNNINIAEDGSISVKDIDGINKMVGKI 180 Query: 159 GLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 +Y+ S FV + P + + V++ +GFLE+SN ++ EM +MI + Sbjct: 181 NIYNAVGSDAFVSIGRNLYIPQ-EGVNVFANNDVSILQGFLENSNVDAGKEMTEMIITQR 239 Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242 F + I ++ M + N+ Sbjct: 240 AFELSSRGIKTADE-MWGIVNNMR 262 >gi|322806967|emb|CBZ04537.1| flagellar basal-body rod protein FlgG [Clostridium botulinum H04402 065] Length = 263 Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 52/264 (19%), Positives = 106/264 (40%), Gaps = 24/264 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI----------KN 50 M + + +A + +L ++++N++N +TVG++ V F E+V + Sbjct: 1 MLRALWNSKSGLIAQQNKLDSISNNLANVNTVGYKREDVSFQELVQETLKRKGYPTSDRP 60 Query: 51 DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVT 109 +I A+ + + G ++TG + D A++G +F + G R G F V Sbjct: 61 EIQTGTGVKATNWIRDTHQQGILLNTGNKTDLAIDGQGFFRVIMADGNYAYERSGNFVVD 120 Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-----------IATM 158 +G LV +G + + I++ G + + + Sbjct: 121 RNGMLVDENGNRLEIQLQQPAGGQILNRIGGFSKNNINIAEDGSISVKDIDGINKMVGKI 180 Query: 159 GLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 +Y+ S FV + P + + V++ +GFLE+SN ++ EM +MI + Sbjct: 181 NIYNAVGSDAFVSIGRNLYIPQ-EGVNVFTNNDVSILQGFLENSNVDAGKEMTEMIITQR 239 Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242 F + I ++ M + N+ Sbjct: 240 AFELSSRGIKTADE-MWGIVNNMR 262 >gi|257866386|ref|ZP_05646039.1| flagellar hook protein [Enterococcus casseliflavus EC30] gi|257873098|ref|ZP_05652751.1| flagellar hook protein [Enterococcus casseliflavus EC10] gi|257875999|ref|ZP_05655652.1| flagellar hook protein [Enterococcus casseliflavus EC20] gi|257800344|gb|EEV29372.1| flagellar hook protein [Enterococcus casseliflavus EC30] gi|257807262|gb|EEV36084.1| flagellar hook protein [Enterococcus casseliflavus EC10] gi|257810165|gb|EEV38985.1| flagellar hook protein [Enterococcus casseliflavus EC20] Length = 312 Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 49/295 (16%), Positives = 105/295 (35%), Gaps = 56/295 (18%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50 M S G++ L+ ++ V++N++N +TVGF++ +V F +++ + Sbjct: 15 MLRSLYSGVSGMKNLQTKMDVVSNNIANVNTVGFKSSRVLFQDMMSQTMSNATAPGNGLG 74 Query: 51 --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---RGIILTRDGR 105 + Q V +G VG+ STG +DF + G +F ++ P TRDG Sbjct: 75 GINATQIGLGVQTGSIDTINTVGAPQSTGRSMDFYISGQGYFMVQGPGANGETYYTRDGA 134 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEIS---------------- 149 F +G+L ++ G + + + D Sbjct: 135 FVRDSNGTLTNSDGMQVLGRSVNGGQPVVYDDNFDENTALSGQDAVSPLSIPSTLTVNGE 194 Query: 150 --------------------QKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP-----T 184 + V+ +G+ + + +G + + Sbjct: 195 TLTYNSMAIDANGLVLAKYGNQTFVMGKVGVATFNNPEGLEKVGGNNYIQTSNSGNPIVA 254 Query: 185 PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + T++ G LE SN + E +MI ++ + + + I +++ + E + Sbjct: 255 GPGNNGAGTLQAGALEMSNVDLSTEFTEMIIASRAYQANSRSITTSDEMLQELLN 309 >gi|253681880|ref|ZP_04862677.1| flagellar basal body rod protein FlgG [Clostridium botulinum D str. 1873] gi|253561592|gb|EES91044.1| flagellar basal body rod protein FlgG [Clostridium botulinum D str. 1873] Length = 263 Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 51/265 (19%), Positives = 109/265 (41%), Gaps = 27/265 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVV----------GA 47 M ++ + E +++N++N+ TVG++ + F +V+ Sbjct: 1 MIRGIYTAVSGLINQEAIQDVISNNLANSTTVGYKKDDLITRKFQDVMLHNYDKVVRGKN 60 Query: 48 IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF----ALESPRGIILTRD 103 ++NDI + + + G TG DFA++G+ +F + TRD Sbjct: 61 VRNDIGELSMGSKIDETCTNYSQGVLEDTGKSTDFAIQGNGFFVVSRNDRVNNQNLYTRD 120 Query: 104 GRFKVTDDGSLVSASGKYPVLDMAS------VPIQIPQKDEIFNVGEKGEISQKGKVIAT 157 G F + +G LV+ SG + + + I + + GEI GK Sbjct: 121 GHFHIDRNGYLVNGSGDKVMGKNLTNGAISPINILVNNSPARMACNDMGEIYLNGKPAFK 180 Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217 + + + + + + +++ S P ++ + V VK+ +LE SN N M E+ M+ Sbjct: 181 IQVVNFENYKSLRKIQDNLYSGTNP----KETNDVIVKQNYLEKSNVNVMAEVSDMMMTM 236 Query: 218 QKFNSITTLIDENEKSMLEAIRNIA 242 + F S ++ ++++ + + + Sbjct: 237 RNFESNQKVVQALDETLGKTVNEVG 261 >gi|124516714|gb|EAY58222.1| putative flagellar basal body rod protein [Leptospirillum rubarum] Length = 267 Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 52/265 (19%), Positives = 101/265 (38%), Gaps = 26/265 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK----------- 49 M+ + ++ A EQ + + +N++N +T GF+ +V F + + Sbjct: 1 MRQAEFALVSGAQAQEQLMDVLTNNLANVNTPGFKRDRVTFRTYLPHREWLHKTPSDQPG 60 Query: 50 -------------NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR 96 + + ++ GSF STG LD A++G+ +F + +PR Sbjct: 61 FRMTPWGEFPTPWGMAGKDVPHAGVDGIHVGYAQGSFRSTGNPLDVAIKGEGFFRILTPR 120 Query: 97 GIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156 G +L+R+GRF + G LV+ G + + V G + + +V+ Sbjct: 121 GEVLSRNGRFTLDRGGRLVTHEGYGVLGEDGKNIRLPESVPGGVRVKADGTVLKGNRVMG 180 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + + + G + + G+ T V G E SN N +EM +MI Sbjct: 181 RLAVVVPENGTGHLAKVGDGLFMADGKTAPVADPD--VLAGGFESSNVNGTFEMVRMIEA 238 Query: 217 TQKFNSITTLIDENEKSMLEAIRNI 241 + F + + + + +I Sbjct: 239 MRSFETHLKALQTLNELTRRTVNDI 263 >gi|332980934|ref|YP_004462375.1| flagellar hook-basal body protein [Mahella australiensis 50-1 BON] gi|332698612|gb|AEE95553.1| flagellar hook-basal body protein [Mahella australiensis 50-1 BON] Length = 264 Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 52/264 (19%), Positives = 101/264 (38%), Gaps = 23/264 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--------- 51 M + A ++ + + T+A+N++N DT F+ ++ K + Sbjct: 1 MIQALWTAGAGLISQQYNVDTIANNIANVDTTAFKRNTAHIEDMPYVYKLNPAIRQADNE 60 Query: 52 --IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKV 108 + + G T LD ++G A+FA+ + + TRDG FK+ Sbjct: 61 GLLPHMGTGARVVSSPKYFAQGPMQQTERNLDLGIDGTAFFAVTDGQGNVFYTRDGNFKL 120 Query: 109 TDD-------GSLVSASGKYPVLDMASVPIQIP--QKDEIFNVGEKGEISQKGKVIATMG 159 T+ S ++ + Y +LD I+IP + ++ G + +G IA + Sbjct: 121 TETEGEDGRIHSYITTANGYWLLDTEGARIEIPAGTIEGDISIDPSGAVMVEGAHIADIA 180 Query: 160 LYSVDMSQGFVRRENSGISPNIPPTPLE-DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 L Q R ++ + P V++GFLE SN + EM +MI + Sbjct: 181 LVEFTNPQALETRGDNLYAVTDNVGPNYLTDGDSKVRQGFLEASNVDIADEMARMIRAQR 240 Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242 + ++ ++ + +I Sbjct: 241 AYQLNARVLQTADEMIG-LANSIR 263 >gi|289523333|ref|ZP_06440187.1| flagellar basal-body rod protein FlgG [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503025|gb|EFD24189.1| flagellar basal-body rod protein FlgG [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 256 Score = 150 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 48/257 (18%), Positives = 90/257 (35%), Gaps = 17/257 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVV-----------G 46 M +A L E+ + ++N++N DT GF+ F EV+ Sbjct: 1 MFRGLYGASSAMLVQEKVIDVASNNLANVDTAGFKRRISVNKSFPEVMIERREAVGPFER 60 Query: 47 AIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGR 105 + I V + + G +ST LD A+ G +F+L I +R G Sbjct: 61 QVYWPIGSASLNVVLSETTVDLSEGQVVSTDNPLDVAISGRGFFSLRDGAGNIFYSRAGN 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 F + +G +V+ G + D + E+G + G+++ + L+ Sbjct: 121 FTLDANGFIVNQEGLTLLGDGGVPINV--GDVSSVAIDERGTVVADGEILGAIQLFEFAN 178 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225 + N + + G LE SN N +YEM ++I + + + Sbjct: 179 PTYLRNYAKNLFQANEAAGEPVLVETPMLVPGALEKSNVNVVYEMVRLIEGQRAYEASAR 238 Query: 226 LIDENEKSMLEAIRNIA 242 + ++ I Sbjct: 239 TLTMQDEQTGSMINTYG 255 >gi|24374756|ref|NP_718799.1| flagellar basal body rod protein FlgF [Shewanella oneidensis MR-1] gi|24349420|gb|AAN56243.1|AE015761_13 flagellar basal-body rod protein FlgF [Shewanella oneidensis MR-1] Length = 247 Score = 150 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 49/238 (20%), Positives = 92/238 (38%), Gaps = 7/238 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M I ++ L+ A+N++N +T GF++ + + + F Sbjct: 1 MDKFLYISMSGAKQNMNELALRANNLANANTDGFKSDMAQARSM--QAFGEGLPTRVFAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASG 119 + G STG +LD A++GD WFA++ TR G G L + G Sbjct: 59 VETPSANFRSGPIKSTGRDLDVAIKGDGWFAVQAQDGSEAYTRSGSLSFDSTGLLHNDRG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 + D + + +P + + + +G + V+ + R Sbjct: 119 NPVMGDAGPIVLPLPIEKVTISQDGIISVRPQGATTEVVEEVGRLKLVNPGNAQMMRGED 178 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 G+ + P V+V+ G +E SN NS+ EM +I L ++F ++ E++ Sbjct: 179 GLFRLVSGDPAPADPSVSVESGAVEGSNVNSVDEMVSLIDLQRQFELQVKMMKTAEEN 236 >gi|74317651|ref|YP_315391.1| flagellar basal body rod protein FlgF [Thiobacillus denitrificans ATCC 25259] gi|74057146|gb|AAZ97586.1| flagellar basal body rod protein FlgF [Thiobacillus denitrificans ATCC 25259] Length = 246 Score = 150 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 55/245 (22%), Positives = 99/245 (40%), Gaps = 6/245 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + ++ +T + N++N T GFR +F V ++ I +FV Sbjct: 1 MDRLIYTAMTGAKHALEQQATTSHNLANATTTGFRAQIDQFRAV--PVQGAILPTRAFVV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 G+ TG ELD A++GD W A+++P TR+G K+ ++G L++ G Sbjct: 59 DSTTGSDFRSGAIQHTGRELDMAVQGDGWIAVQAPDGSEAYTRNGSLKLDENGVLLTRDG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG---LYSVDMSQGFVRRENSG 176 + D + I + + G + + V+ G + R + G Sbjct: 119 LQVMGDGGPLSIPPGRNVAVGKDGTISLVPDGSAATGLTSIGRMKLVNPPAGDLVRGDDG 178 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + + V + G LE SN N + EM MI L ++F+ L+ E + + Sbjct: 179 LFRLKDGGAADVDPKVALIGGALESSNVNVVDEMVNMISLARQFDMHMKLLQHAENNDSK 238 Query: 237 AIRNI 241 A + + Sbjct: 239 AAQLL 243 >gi|301168505|emb|CBW28095.1| flagellar basal-body rod protein [Bacteriovorax marinus SJ] Length = 261 Score = 150 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 44/262 (16%), Positives = 89/262 (33%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + N A E +ST+++N++N +T G++ + + ++ + Sbjct: 1 MLRALNTAATGMAAQEMNVSTISNNIANVNTTGYKKQRTEIQDLSYQTIQEAGSRSSADT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q S GS T D + G+ +F + P TRDG F Sbjct: 61 MNNVGVQIGSGAKVSGVRKEFTQGSQQITNNPYDLMISGEGFFGIMMPNNEVRYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 V G+LV+ G P V + ++ + +++ Sbjct: 121 SVDASGTLVNKQGYRVFPSFVFPPGTKSVHIAHDGTVEAYLSNQIEPTILGQIPVFTFIN 180 Query: 166 SQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + T+ +G LE SN + M EM +I + + Sbjct: 181 PVGLKSTGMNLYTITRSSGQAIQNIAGNANAGTIAQGALESSNVSIMNEMTSLIKAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNIA 242 + ++ ++ + + + NI Sbjct: 241 EMNSKVMGVADQML-QTVNNIR 261 >gi|85706167|ref|ZP_01037262.1| flagellar basal-body rod protein FlgG [Roseovarius sp. 217] gi|85669331|gb|EAQ24197.1| flagellar basal-body rod protein FlgG [Roseovarius sp. 217] Length = 261 Score = 150 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 42/256 (16%), Positives = 93/256 (36%), Gaps = 21/256 (8%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID----------- 53 I A + R+ T+++N++N T G+ + +F+++ Sbjct: 4 LKIAATGMAAQQMRVETISNNLANMSTTGYNARRAEFADLHYQQLARAGTINATDGTVLP 63 Query: 54 ---QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVT 109 Q V + GS T +LD A+EG+ + + P G TRDG K + Sbjct: 64 TGVQLGLGVRPAAISVQLAQGSLSQTNGDLDVAIEGNGYLEVTLPSGQAAYTRDGALKRS 123 Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE-KGEISQKGKVIATMGLYSVDMSQG 168 DG +V++ G ++ + + + + + + L +G Sbjct: 124 ADGIIVNSEGFPVAPEITIPEDARSITINAEGEVFAFFQDNAEAQQLGQLDLAGFSNPKG 183 Query: 169 FVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223 ++ P T+++G+LEDS+ + + E+ ++I + + Sbjct: 184 LEAIGSNLFVETEASGPANVTTAGQDGLGTLRQGYLEDSSVDPVREITELIEAQRGYELN 243 Query: 224 TTLIDENEKSMLEAIR 239 +I ++ + + Sbjct: 244 AKVITAADQMLSATTQ 259 >gi|331005440|ref|ZP_08328819.1| Flagellar basal-body rod protein flgG [gamma proteobacterium IMCC1989] gi|330420716|gb|EGG95003.1| Flagellar basal-body rod protein flgG [gamma proteobacterium IMCC1989] Length = 258 Score = 150 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 45/258 (17%), Positives = 90/258 (34%), Gaps = 17/258 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------D 51 M +FNI + + ++ T+A+N+SN +T G++ KV F ++V Sbjct: 1 MLDAFNISATGLQSQQTQVETIANNLSNVNTDGYKKSKVIFQDIVSKQLGINTNGLINQA 60 Query: 52 IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTD 110 + ++ G +T LD ++G + + P G TR G V + Sbjct: 61 SNNTGIGSSANLINKIFTGGDPKATDRPLDIFIQGSGFLEVVMPDGRYGYTRVGNLNVDE 120 Query: 111 DGSLVSASGKYPV-LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169 +G L ++ G L Q D V + + L + G Sbjct: 121 NGVLTNSDGFSLSSLVQIPPDAQDIVIDSEGTVSVSVSGETDLVPVGQLELSTFLNESGL 180 Query: 170 VRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224 P++ T+++GF+E SN N + E+ ++ + + Sbjct: 181 SSLGGGIYLPSLKSGDPSYGQPGEIGFGTLQQGFIESSNVNLVEELTSLMSAQRGYELNA 240 Query: 225 TLIDENEKSMLEAIRNIA 242 ++ + + I + Sbjct: 241 RVVQAADDML-SIINTLR 257 >gi|146293689|ref|YP_001184113.1| flagellar basal body rod protein FlgF [Shewanella putrefaciens CN-32] gi|145565379|gb|ABP76314.1| flagellar basal-body rod protein FlgF [Shewanella putrefaciens CN-32] gi|319427088|gb|ADV55162.1| flagellar basal-body rod protein FlgF [Shewanella putrefaciens 200] Length = 247 Score = 150 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 45/238 (18%), Positives = 86/238 (36%), Gaps = 7/238 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M I ++ L+ +N++N +T GF++ + + + F Sbjct: 1 MDKFLYISMSGAKQNMHELALRGNNLANANTDGFKSDMAQARSM--QAFGEGLPTRVFAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASG 119 + G +TG +LD A++GD WFA++ TR G G L + G Sbjct: 59 IETPSANFRSGPIKTTGRDLDVAIKGDGWFAVQAKDGAEAYTRSGSLSFDATGLLHNDRG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 + D + + +P + + +G + V+ + R Sbjct: 119 NPVMGDAGPIVLPLPIDKVTISQDGIISVRPQGATAEVIEEVGRLKLVNPGNAQMMRGED 178 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 G+ + V V+ G +E SN N + EM +I L ++F ++ E+ Sbjct: 179 GLFRLVSGNDAPADPNVAVESGAVEGSNVNPVDEMVSLIELQRQFEMQVKMMKTAEEI 236 >gi|254496889|ref|ZP_05109737.1| flagellar basal body rod protein FlgG [Legionella drancourtii LLAP12] gi|254353908|gb|EET12595.1| flagellar basal body rod protein FlgG [Legionella drancourtii LLAP12] Length = 261 Score = 150 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 92/261 (35%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 MQ + + + A E+ ++T+A+N++N +T G++ + +F +++ + + Sbjct: 1 MQPALWVSKSGLEAQEKTIATIANNLANVNTTGYKKDRAQFEDLLYQNTSQAGAQSSENS 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 + V E GS T D A++G +F + P G TR+G F Sbjct: 61 IIPTGINTGTGVHLVSTQKLFEQGSIQHTNNAYDVAIQGQGFFTILMPDGTQAYTRNGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 + G +V + G + + + V S + T+ L + Sbjct: 121 SIDSTGQVVDSHGYLLQPAITLPAQTLGITISQDGVVSATVAGSTTPTNLGTIQLTNFMN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + + T+ + LE SN N + E+ MI + + Sbjct: 181 PAGLQPIGQNLYTETQSSGNPTLNNPGSNGLGTLLQNNLEASNVNVVEELVNMIQAQRGY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + + + + + Sbjct: 241 EITAKGMQTVDNMLQYLNQTV 261 >gi|23015787|ref|ZP_00055554.1| COG4786: Flagellar basal body rod protein [Magnetospirillum magnetotacticum MS-1] Length = 246 Score = 150 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 64/246 (26%), Positives = 115/246 (46%), Gaps = 7/246 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND---IDQKIS 57 MQ + I L+ Q AL +++ VA+NM+N +T F+ ++ F E + ++ I K++ Sbjct: 1 MQNTSYIALSRQAALWRQMEVVANNMANANTPAFKGEEMMFREFLVPTRSSERAIGGKLA 60 Query: 58 FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSA 117 FV G T LDFAL GD +F +E+ G+ R+G F++ G LV++ Sbjct: 61 FVQDVGVLRDTREGPLTKTDNPLDFALHGDGYFQIETEAGMRYARNGHFRLDQTGMLVNS 120 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177 G +D PI + V G +S + +A M + + Q + +S Sbjct: 121 QGYAV-MDDRDQPIVFAPNETRVEVASDGTVSTENGRVARMKVVKFENDQLLRKAGDSLF 179 Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 P E + V +G +E+SN + EM +M + +++ + ++D + L+A Sbjct: 180 ETTQDP---EAVQSPNVAQGMMEESNVQPVLEMTRMTQILREYQGVQKMLDAEHERQLKA 236 Query: 238 IRNIAS 243 I+ + S Sbjct: 237 IQTLGS 242 >gi|89075496|ref|ZP_01161907.1| putative flagellar basal-body rod protein FlgF [Photobacterium sp. SKA34] gi|89048768|gb|EAR54339.1| putative flagellar basal-body rod protein FlgF [Photobacterium sp. SKA34] Length = 249 Score = 150 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 58/241 (24%), Positives = 98/241 (40%), Gaps = 11/241 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + ++ + A+N++N T GFR + + + F Sbjct: 1 MDRALYLAMSGAKQDMYGMQVHANNLANVSTTGFRADLQQARSM--QAYGEGLPSRVFSM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119 + + GS I+TG +LD A+EGD W A ++ TR G K+ G L +++G Sbjct: 59 AERPGNDFAQGSVINTGRDLDVAVEGDGWLAVMDVKGQEAYTRAGHLKIDQTGMLQNSNG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172 + L PI IP +G+ G +S + + VD +Q + Sbjct: 119 QLV-LGQNDSPIFIPLPISKIEIGKDGTVSVLPQGAPPDAIAVVDRIKLVKPDNQALFKD 177 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 + PL+ + VT+ +G LE SN N++ EM MI L + F L+ E+ Sbjct: 178 TDGLFKSIGERIPLDADASVTLAKGMLEGSNVNAVSEMTSMIDLQRHFEMQVKLMKTAEE 237 Query: 233 S 233 Sbjct: 238 M 238 >gi|76808961|ref|YP_331880.1| flagellar basal body rod protein FlgF [Burkholderia pseudomallei 1710b] gi|126452329|ref|YP_001064565.1| flagellar basal body rod protein FlgF [Burkholderia pseudomallei 1106a] gi|167736704|ref|ZP_02409478.1| flagellar basal body rod protein FlgF [Burkholderia pseudomallei 14] gi|167822319|ref|ZP_02453790.1| flagellar basal body rod protein FlgF [Burkholderia pseudomallei 9] gi|167909128|ref|ZP_02496219.1| flagellar basal body rod protein FlgF [Burkholderia pseudomallei 112] gi|226199728|ref|ZP_03795279.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei Pakistan 9] gi|242314788|ref|ZP_04813804.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei 1106b] gi|254196477|ref|ZP_04902901.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei S13] gi|254260132|ref|ZP_04951186.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei 1710a] gi|254295815|ref|ZP_04963272.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei 406e] gi|14091669|gb|AAK53815.1|AF370881_1 flagellar basal-body rod protein [Burkholderia pseudomallei] gi|76578414|gb|ABA47889.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei 1710b] gi|126225971|gb|ABN89511.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei 1106a] gi|157805973|gb|EDO83143.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei 406e] gi|169653220|gb|EDS85913.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei S13] gi|225928079|gb|EEH24115.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei Pakistan 9] gi|242138027|gb|EES24429.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei 1106b] gi|254218821|gb|EET08205.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei 1710a] Length = 253 Score = 150 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 53/250 (21%), Positives = 89/250 (35%), Gaps = 10/250 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-----QK 55 M + ++ S VA+N++N T GFR F V ++ Sbjct: 1 MDRLIYTAMTGATQSLEQQSVVANNLANASTTGFRAQLATFRAVPMNFEDGSGNVDPATT 60 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSL 114 ++ S G TG LD A++G W ++ P TR G V +G L Sbjct: 61 RTYTLSSTPGADFAPGPIERTGNPLDVAVQGPGWLSVMLPDGTEAYTRAGNLHVDQNGQL 120 Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVR 171 V+A+ V + + + + I G + A + V+ ++ Sbjct: 121 VTANNLPVVGNGGPLAVPPNAQLTIGADGTVSALMPGDPPTAVAMIDRLKLVNPDPATMK 180 Query: 172 RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 R + G+ P + V V LE SN N + M MI + F T LI + Sbjct: 181 RGDDGLFRTADGNPADADPAVKVVPNSLEGSNVNPVAAMVSMIDNARAFELQTKLIQSAD 240 Query: 232 KSMLEAIRNI 241 ++ +A + Sbjct: 241 QN-EQAANQL 249 >gi|89056684|ref|YP_512135.1| flagellar basal body rod protein FlgG [Jannaschia sp. CCS1] gi|88866233|gb|ABD57110.1| flagellar basal-body rod protein FlgG [Jannaschia sp. CCS1] Length = 261 Score = 150 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 36/259 (13%), Positives = 88/259 (33%), Gaps = 21/259 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + +I A + R+ +++N++N T G+ + F+++ Sbjct: 1 MRALDIAATGMSAQQLRVDVISNNIANMSTTGYSPRRADFADLHYQQMVRAGAINASDGT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q V ++ E G+ +TG +LD A+EG + + P TRDG Sbjct: 61 VVPAGVQIGLGVRPAAVTVTWEQGTLGATGGQLDVAIEGRGYLEVTLPSGDNAYTRDGAL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQKGKVIATMGLYSVDM 165 + T DG +V+ G + + +++ + + Sbjct: 121 QRTGDGLIVTNDGFEVNPGITIPDDAQEITINANGEVFASFRGEIQPQLLGQLNMVRFTN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ T ++G++E S+ +++ E+ +I + + Sbjct: 181 DNGLEAIGSNLFLETGASGAPLAGDPGEDGMGTFRQGYVEQSSVDAVREITDLIEAQRGY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 ++ ++ + + Sbjct: 241 ELNAKVLTAADQILGATTQ 259 >gi|258592561|emb|CBE68870.1| Flagellar basal body and hook proteins [NC10 bacterium 'Dutch sediment'] Length = 245 Score = 150 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 46/248 (18%), Positives = 92/248 (37%), Gaps = 11/248 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA------IKNDIDQ 54 M + + +A ++ ++ N++NT T GF+ + + + Sbjct: 1 MVSGLYTAASGLMAQMAKMEALSQNLANTGTPGFKGDLMVIEGGARGPLQSALLIEGRPE 60 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSL 114 V G+ G T LD A G +F +++P+G+ TR G F + +G L Sbjct: 61 GPQPVWIGRRVTDFGRGLIRETQNPLDLANSGPGYFVVQTPQGVRYTRAGNFAIDAEGHL 120 Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174 + G + F V G I +G+ + + + S +R Sbjct: 121 ETPDGSRVQ----GKKGAVQIPGGRFIVDNSGRILVEGQEVDRLRIVD-PDSTALIRGGG 175 Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 S + V +++GFLE SN +++ M Q++ + + I ++S+ Sbjct: 176 SLFTLKPSAPEPPVAKTVEIRQGFLEGSNVDAVTAMTQIMVSLRASEAYQKAIHALDQSL 235 Query: 235 LEAIRNIA 242 +A + Sbjct: 236 NQAASELG 243 >gi|239628977|ref|ZP_04672008.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239519123|gb|EEQ58989.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 255 Score = 150 bits (377), Expect = 3e-34, Method: Composition-based stats. Identities = 60/256 (23%), Positives = 113/256 (44%), Gaps = 15/256 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN--DIDQKISF 58 M S+ ++A A +Q L A+NM+N T G+++++ F++++ + Q Sbjct: 1 MNISYYTAVSAMNAFQQDLDVTANNMANVGTNGYKSMRSDFNDLLYTQMDMRPEAQVGHG 60 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI---ILTRDGRFKVT--DDGS 113 V + + + G F TG LDFA+ G A+FA+++ TRDG F+++ +DG+ Sbjct: 61 VKNNGPGTTFQQGIFRKTGRALDFAVSGKAFFAIQTSEDEEEPAYTRDGAFQISSTEDGN 120 Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRE 173 ++ S VLD PI++ K G+ + +GL+ + +G + Sbjct: 121 YLTTSDGSYVLDWDGEPIELEYKAAEDGRGDDTGELDLDSIADRIGLFVCENPEGLIHAG 180 Query: 174 NSGISPNIPPTP-------LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 ++ ED +V LE SNA+ EM ++ + F + + Sbjct: 181 SNLFRTGEASGEWMSIEDLDEDQEKSSVMTRTLEMSNADMSTEMVNLMQTQRAFQLNSRI 240 Query: 227 IDENEKSMLEAIRNIA 242 + ++ M E I N+ Sbjct: 241 VSTADQ-MEEMINNLR 255 >gi|125975103|ref|YP_001039013.1| protein of unknown function DUF1078-like protein [Clostridium thermocellum ATCC 27405] gi|125715328|gb|ABN53820.1| protein of unknown function DUF1078-like protein [Clostridium thermocellum ATCC 27405] Length = 259 Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats. Identities = 52/262 (19%), Positives = 102/262 (38%), Gaps = 26/262 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51 M + LA +++ V++N++N +T F+ + F +++ ND Sbjct: 1 MIRGLYTSGWSMLANSKQMDVVSNNLANVNTTAFKKDTLILESFPDMLVRRINDSRSASN 60 Query: 52 ----IDQKISFVASGKEYLSKEVGSFISTGTELDFAL--EGDAWFALESP-----RGIIL 100 + G+ + G T LD A+ A+F + P Sbjct: 61 PSGRLGNVQLGNDVGEVFTYYTQGQLQKTDNNLDMAISNCDTAFFTVAVPGGNEEYTEYY 120 Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 TRDG F + G LV+ G + I E F+V + G I Q G+ +A + + Sbjct: 121 TRDGSFALNAYGQLVTKEGYLVM----GQNGVITLNSENFSVSDDGTIIQDGEAVARLLI 176 Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 + + + ++ + V++G+LE SN NS+ EM MI + + + Sbjct: 177 RNFTDTTTLRKVGSNLVQRTENTQEQPFD--GVVRQGYLEQSNVNSINEMINMITIMRSY 234 Query: 221 NSITTLIDENEKSMLEAIRNIA 242 + ++ + ++ +A+ I Sbjct: 235 EANQKILQAQDGTLEKAVNEIG 256 >gi|229825259|ref|ZP_04451328.1| hypothetical protein GCWU000182_00612 [Abiotrophia defectiva ATCC 49176] gi|229790631|gb|EEP26745.1| hypothetical protein GCWU000182_00612 [Abiotrophia defectiva ATCC 49176] Length = 258 Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats. Identities = 59/259 (22%), Positives = 107/259 (41%), Gaps = 21/259 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFR---TIKVKFSEVVGAIKND------ 51 M S + ++R+ + +N++N T GF+ + F V+G D Sbjct: 1 MLRSLYTAYTGMVNEQRRMDIMTNNLANATTAGFKMESSSSQSFDRVLGIKIRDVSEAFN 60 Query: 52 ---IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-----PRGIILTRD 103 I Q V G+ + G+ T + D AL G+ +FA+ TRD Sbjct: 61 DHSIGQMSLGVKVGEVFTDYSQGALRDTAGKYDLALSGEGFFAVRYVDKNGNESTKYTRD 120 Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 G F++T DG + G L S +++P E +VG G +S +VI + + Sbjct: 121 GNFRLTKDGHVTDVYGN--QLRTESGVLRVPLDSEDISVGIDGTVSVNNQVIDKIKIVDF 178 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223 + + ++ E S V +G++E SN NS+ EM +I +T+ + + Sbjct: 179 ENYDYIEKFGDNLYQT--VEGATEKESEAQVLQGYIEQSNVNSVREMVNLITITRAYEAG 236 Query: 224 TTLIDENEKSMLEAIRNIA 242 +I ++ M A+ ++ Sbjct: 237 QKMIQSSDSIMESAVNSVG 255 >gi|256003243|ref|ZP_05428235.1| protein of unknown function DUF1078 domain protein [Clostridium thermocellum DSM 2360] gi|281418479|ref|ZP_06249498.1| fagellar hook-basal body protein [Clostridium thermocellum JW20] gi|255992934|gb|EEU03024.1| protein of unknown function DUF1078 domain protein [Clostridium thermocellum DSM 2360] gi|281407563|gb|EFB37822.1| fagellar hook-basal body protein [Clostridium thermocellum JW20] gi|316939268|gb|ADU73302.1| flagellar hook-basal body protein [Clostridium thermocellum DSM 1313] Length = 259 Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats. Identities = 52/262 (19%), Positives = 102/262 (38%), Gaps = 26/262 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51 M + LA +++ V++N++N +T F+ + F +++ ND Sbjct: 1 MIRGLYTSGWSMLANSKQMDVVSNNLANVNTTAFKKDTLILESFPDMLVRRINDSRSASN 60 Query: 52 ----IDQKISFVASGKEYLSKEVGSFISTGTELDFAL--EGDAWFALESP-----RGIIL 100 + G+ + G T LD A+ A+F + P Sbjct: 61 PSGRLGNVQLGNDVGEVFTYYTQGQLQKTDNNLDMAISNCDTAFFTVAVPGGNGEYTEYY 120 Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 TRDG F + G LV+ G + I E F+V + G I Q G+ +A + + Sbjct: 121 TRDGSFALNAYGQLVTKEGYLVM----GQNGVITLNSENFSVSDDGTIIQDGEAVARLLI 176 Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 + + + ++ + V++G+LE SN NS+ EM MI + + + Sbjct: 177 RNFTDTTTLRKVGSNLVQRTENTQEQPFD--GVVRQGYLEQSNVNSINEMINMITIMRSY 234 Query: 221 NSITTLIDENEKSMLEAIRNIA 242 + ++ + ++ +A+ I Sbjct: 235 EANQKILQAQDGTLEKAVNEIG 256 >gi|53717915|ref|YP_106901.1| flagellar basal body rod protein FlgF [Burkholderia pseudomallei K96243] gi|53724566|ref|YP_104799.1| flagellar basal body rod protein FlgF [Burkholderia mallei ATCC 23344] gi|67641539|ref|ZP_00440316.1| flagellar basal-body rod protein FlgF [Burkholderia mallei GB8 horse 4] gi|121600078|ref|YP_994292.1| flagellar basal body rod protein FlgF [Burkholderia mallei SAVP1] gi|124385734|ref|YP_001028059.1| flagellar basal body rod protein FlgF [Burkholderia mallei NCTC 10229] gi|126438677|ref|YP_001057323.1| flagellar basal body rod protein FlgF [Burkholderia pseudomallei 668] gi|126449756|ref|YP_001082866.1| flagellar basal body rod protein FlgF [Burkholderia mallei NCTC 10247] gi|134283591|ref|ZP_01770290.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei 305] gi|167001538|ref|ZP_02267333.1| flagellar basal-body rod protein FlgF [Burkholderia mallei PRL-20] gi|167717661|ref|ZP_02400897.1| flagellar basal body rod protein FlgF [Burkholderia pseudomallei DM98] gi|167813803|ref|ZP_02445483.1| flagellar basal body rod protein FlgF [Burkholderia pseudomallei 91] gi|167843909|ref|ZP_02469417.1| flagellar basal body rod protein FlgF [Burkholderia pseudomallei B7210] gi|167892411|ref|ZP_02479813.1| flagellar basal body rod protein FlgF [Burkholderia pseudomallei 7894] gi|167900909|ref|ZP_02488114.1| flagellar basal body rod protein FlgF [Burkholderia pseudomallei NCTC 13177] gi|167917165|ref|ZP_02504256.1| flagellar basal body rod protein FlgF [Burkholderia pseudomallei BCC215] gi|217425035|ref|ZP_03456531.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei 576] gi|237810462|ref|YP_002894913.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei MSHR346] gi|254174652|ref|ZP_04881313.1| flagellar basal-body rod protein FlgF [Burkholderia mallei ATCC 10399] gi|254182139|ref|ZP_04888736.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei 1655] gi|254188069|ref|ZP_04894581.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei Pasteur 52237] gi|254201897|ref|ZP_04908261.1| flagellar basal-body rod protein FlgF [Burkholderia mallei FMH] gi|254207231|ref|ZP_04913582.1| flagellar basal-body rod protein FlgF [Burkholderia mallei JHU] gi|254359733|ref|ZP_04976004.1| flagellar basal-body rod protein FlgF [Burkholderia mallei 2002721280] gi|52208329|emb|CAH34262.1| flagellar basal-body rod protein [Burkholderia pseudomallei K96243] gi|52427989|gb|AAU48582.1| flagellar basal-body rod protein FlgF [Burkholderia mallei ATCC 23344] gi|121228888|gb|ABM51406.1| flagellar basal-body rod protein FlgF [Burkholderia mallei SAVP1] gi|124293754|gb|ABN03023.1| flagellar basal-body rod protein FlgF [Burkholderia mallei NCTC 10229] gi|126218170|gb|ABN81676.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei 668] gi|126242626|gb|ABO05719.1| flagellar basal-body rod protein FlgF [Burkholderia mallei NCTC 10247] gi|134245000|gb|EBA45095.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei 305] gi|147747791|gb|EDK54867.1| flagellar basal-body rod protein FlgF [Burkholderia mallei FMH] gi|147752773|gb|EDK59839.1| flagellar basal-body rod protein FlgF [Burkholderia mallei JHU] gi|148028947|gb|EDK86879.1| flagellar basal-body rod protein FlgF [Burkholderia mallei 2002721280] gi|157935749|gb|EDO91419.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei Pasteur 52237] gi|160695697|gb|EDP85667.1| flagellar basal-body rod protein FlgF [Burkholderia mallei ATCC 10399] gi|184212677|gb|EDU09720.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei 1655] gi|217392055|gb|EEC32081.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei 576] gi|237502787|gb|ACQ95105.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei MSHR346] gi|238522490|gb|EEP85934.1| flagellar basal-body rod protein FlgF [Burkholderia mallei GB8 horse 4] gi|243062739|gb|EES44925.1| flagellar basal-body rod protein FlgF [Burkholderia mallei PRL-20] Length = 253 Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats. Identities = 54/250 (21%), Positives = 85/250 (34%), Gaps = 10/250 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-----QK 55 M + ++ S VA+N++N T GFR F V ++ Sbjct: 1 MDRLIYTAMTGATQSLEQQSVVANNLANASTTGFRAQLATFRAVPMNFEDGSGNVDPATT 60 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSL 114 ++ S G TG LD A++G W ++ P TR G V +G L Sbjct: 61 RTYTLSSTPGADFAPGPIERTGNPLDVAVQGPGWLSVMLPDGTEAYTRAGNLHVDQNGQL 120 Query: 115 VSASGKYPVLDMAS---VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171 V+A+ V + P V V L V+ ++ Sbjct: 121 VTANNLPVVGNGGPLAVPPNAQLTIGADGTVSALMPGDPPTAVAMIDQLKLVNPDPATMK 180 Query: 172 RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 R + G+ P + V V LE SN N + M MI + F T LI + Sbjct: 181 RGDDGLFRTADGNPADADPAVKVVPNSLEGSNVNPVAAMVSMIDNARAFELQTKLIQSAD 240 Query: 232 KSMLEAIRNI 241 ++ +A + Sbjct: 241 QN-EQAANQL 249 >gi|212634349|ref|YP_002310874.1| flagellar basal body rod protein FlgF [Shewanella piezotolerans WP3] gi|212555833|gb|ACJ28287.1| Flagellar basal body rod protein [Shewanella piezotolerans WP3] Length = 247 Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats. Identities = 47/238 (19%), Positives = 93/238 (39%), Gaps = 7/238 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + ++ L+ A+N++N +T GF+ + + + F Sbjct: 1 MDKLLYVAMSGAKQNMNSLAISANNLANANTDGFKADLAQARSM--QAFGEGLPTRVFAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119 + G +TG +LD A++GD W A+++ G TR G G L + G Sbjct: 59 TESPSADFTNGPIKTTGRDLDIAVKGDGWIAVQADDGGEAYTRSGSLSFDTTGVLRNDKG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG---KVIATMGLYSVDMS-QGFVRRENS 175 + D + + +P + + + G +VI +G + + R Sbjct: 119 TPLMGDNGPIVLPLPIEKIEISQDGIISVRPTGATAEVIEEVGRIKLVNPGNENLMRGKD 178 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 G+ + P V + G +E SN N+++EM MI + ++F ++ E++ Sbjct: 179 GLFRQMSGEPAPADLSVGLLSGAVEGSNVNAVHEMVSMIDIQRQFEMQVKMMKTAEET 236 >gi|161620214|ref|YP_001594100.1| flagellar basal body rod protein FlgF [Brucella canis ATCC 23365] gi|161337025|gb|ABX63329.1| flagellar basal body rod protein [Brucella canis ATCC 23365] Length = 233 Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats. Identities = 77/242 (31%), Positives = 125/242 (51%), Gaps = 14/242 (5%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 S +GL++ + LE+R+ +A N++N TVGFR KF +V +D +SF + Sbjct: 3 NNSIYVGLSSLITLERRMDAIAHNVANASTVGFRGEGTKFDTIVSDKASD---DVSFATA 59 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 GK Y+ E G I T LD A++GDAW + +P+G + +RDGR K+ G LVS +G Sbjct: 60 GKSYIRTEAGPLIKTDNPLDVAVKGDAWMSFSTPQGQVYSRDGRMKMLSTGDLVSVTGNA 119 Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 I + G I Q G + +GLY++ SG+ P+ Sbjct: 120 -----------ILDVGGAPRISSDGAIYQNGVQVGVIGLYTIPADADLAYAGTSGVIPSK 168 Query: 182 PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 P P+ D + V V +G +E SN ++M EM ++I +++ F + L+ + E ++ EAI+ + Sbjct: 169 PAQPVVDDNSVGVVQGMIEGSNVDAMTEMTRLISISRAFEQVNNLLSQQEATVSEAIKTL 228 Query: 242 AS 243 S Sbjct: 229 GS 230 >gi|254419855|ref|ZP_05033579.1| conserved domain protein [Brevundimonas sp. BAL3] gi|196186032|gb|EDX81008.1| conserved domain protein [Brevundimonas sp. BAL3] Length = 246 Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats. Identities = 66/246 (26%), Positives = 111/246 (45%), Gaps = 7/246 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--IDQKISF 58 M+ + IGL+ Q+ L + L VA+N++N DT GF+ ++ VG + I SF Sbjct: 1 MENAAYIGLSRQMTLRRELDIVANNVANADTTGFKVEQLMVGTEVGQRARNDSIRPSASF 60 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP--RGIILTRDGRFKVTDDGSLVS 116 V GS TG LDFA+ G+ F G TRDG F + +G L + Sbjct: 61 VLDNGVGRDFGQGSMSETGRPLDFAIAGEGAFFTVRDGAAGEAYTRDGAFTMDPEGRLTT 120 Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 G+ + I + +VG G I+Q G++ + + D + G + + G Sbjct: 121 KQGQAVLGG--GAEIVLDPALGAPSVGADGTITQSGQITGRLSVVRFD-TLGVLEKGGDG 177 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + N + + V + +G LE SN NS+ E+ +I +++ + SIT +I+ Sbjct: 178 LYRNGSNVQPVEANDVQIHQGSLEASNVNSLTEITNLIEISRAYESITRMIENTNDLSRR 237 Query: 237 AIRNIA 242 A+ + Sbjct: 238 AVERLG 243 >gi|300817268|ref|ZP_07097486.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 107-1] gi|300530244|gb|EFK51306.1| flagellar basal-body rod protein FlgG [Escherichia coli MS 107-1] Length = 261 Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats. Identities = 39/261 (14%), Positives = 84/261 (32%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + A + +S +A+N++N +T GF+ +V F ++ + Sbjct: 1 MNAALWFSKTGLSAQDAEMSAIANNIANVNTTGFKRDRVMFQDLFYQTQEAPGAMLDQNN 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106 Q S V + G+ +T ++ A+ G + ++ I TRDG Sbjct: 61 IMPTGLQFGSGVRIVGTQKTFTEGNVETTDNAMNVAIMGQGFLQVQKANGDIAYTRDGNL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165 +V DG L + G ++ + + L + Sbjct: 121 QVNADGVLTISQGLPLQPEIDVPAGATNVAFGEDGTVTAILPGDSDVTELGQLTLVNFAN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ + T++ LE SN + + EM MI + + + Sbjct: 181 PAGLSAEGDNLYLETAASGQPTEGVPGEDGLGTLQDNALEGSNVDIVNEMVAMITVQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 ++ + + + + Sbjct: 241 EMNAKMVSAADDMLQYISQTL 261 >gi|325567523|ref|ZP_08144190.1| flagellar hook-basal body protein [Enterococcus casseliflavus ATCC 12755] gi|325158956|gb|EGC71102.1| flagellar hook-basal body protein [Enterococcus casseliflavus ATCC 12755] Length = 298 Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats. Identities = 50/295 (16%), Positives = 106/295 (35%), Gaps = 56/295 (18%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50 M S G++ L+ ++ V++N++N +TVGF++ +V F +++ + Sbjct: 1 MLRSLYSGVSGMKNLQTKMDVVSNNIANVNTVGFKSSRVLFQDMMSQTMSNATAPGNGLG 60 Query: 51 --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---RGIILTRDGR 105 + Q V +G VG+ STG +DF + G +F ++ P TRDG Sbjct: 61 GINATQIGLGVQTGSIDTINTVGAPQSTGRSMDFYISGQGYFMVQGPGANGETYYTRDGA 120 Query: 106 FKVTDDGSLVSASGKYP------------------------------------VLDMASV 129 F +G+L ++ G L + Sbjct: 121 FVRDSNGTLTNSDGMQVLGRSVNGGQPVVYDDNFDENTALSGQGAVSPLSIPSTLTVNGE 180 Query: 130 PIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP-----T 184 + N + + V+ +G+ + + +G + + Sbjct: 181 TLTYNSMAIDANGLVLAKYGNQTFVMGKVGVATFNNPEGLEKVGGNNYIQTSNSGNAIVA 240 Query: 185 PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + T++ G LE SN + E +MI ++ + + + I +++ + E + Sbjct: 241 GPGNNGAGTLQAGALEMSNVDLSTEFTEMIIASRAYQANSRSITTSDEMLQELLN 295 >gi|168180937|ref|ZP_02615601.1| flagellar basal body rod protein [Clostridium botulinum NCTC 2916] gi|182668349|gb|EDT80328.1| flagellar basal body rod protein [Clostridium botulinum NCTC 2916] Length = 255 Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats. Identities = 53/258 (20%), Positives = 97/258 (37%), Gaps = 20/258 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKF---SEVVGAI--------- 48 M S ++ ++LE + T++ N+SN TVG+++ + F +V+ Sbjct: 1 MIRSLYTAVSGMISLEAKQDTISANLSNASTVGYKSTNLAFKKFEDVLMENYDKKLGNKN 60 Query: 49 -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107 +N I + G TG DFALEG +F +E+ TRDG F Sbjct: 61 IQNIIGGLSMGNKIDEVNNLFTQGIIQDTGKPTDFALEGRGFFTIENNGRNYYTRDGHFH 120 Query: 108 VTDDGSLVSASGKYPVL--DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 V G LV+ SG + I ++ G I G + + + Sbjct: 121 VDTRGYLVNDSGYNVMGINRNTGAREAIFVGNKTIGTDASGNIILNGVPSYSFQVADFND 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225 + ++ N P V++ LE SN N EM M+ + F + Sbjct: 181 YNSLKKIGDNLFEGNNPQNIN-----GIVRQNSLEKSNVNVTNEMVTMLTTMRSFETNQK 235 Query: 226 LIDENEKSMLEAIRNIAS 243 ++ ++++ + + + + Sbjct: 236 IVQSIDETLGKTVNEVGA 253 >gi|23092317|gb|AAN08642.1| FlgG [Aeromonas hydrophila] Length = 262 Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats. Identities = 42/261 (16%), Positives = 94/261 (36%), Gaps = 21/261 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + I A + ++ ++N++N TVGF+ + + +++ N + Sbjct: 1 MNPALWISKTGLDAQQTNIAVTSNNLANASTVGFKKSRAIYEDLLYQNINQPGGRSSADT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 + + G+ +T LD + G +F ++ P G TR+G+F Sbjct: 61 ELPSGLMLGAGAKVVATQKNHSQGNVQTTDNSLDLMISGRGYFEIQLPDGSAAYTRNGQF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG--KVIATMGLYSVD 164 + D+G++V+ YP+ +P + ++ G +V+ + Sbjct: 121 TLNDEGTIVTPGNGYPLQPEIQIPENAQSVTVGEDGQVSVQLKGDGASQVVGQINTSDFV 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQK 219 + G + + +K+G LE SN N E+ +I + Sbjct: 181 NASGLQPMGENMFVETQSSGAPIQGTAGADGLGVIKQGMLETSNVNVTEELVNLIQAHRV 240 Query: 220 FNSITTLIDENEKSMLEAIRN 240 + + ++ + M I+ Sbjct: 241 YEMNSNVLSAVDGMMSFLIQR 261 >gi|254466371|ref|ZP_05079782.1| flagellar basal-body rod protein FlgF [Rhodobacterales bacterium Y4I] gi|206687279|gb|EDZ47761.1| flagellar basal-body rod protein FlgF [Rhodobacterales bacterium Y4I] Length = 238 Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 67/241 (27%), Positives = 115/241 (47%), Gaps = 6/241 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M T+ ++ Q L + + +A+N++N+ T G+R + FSE V + +S Sbjct: 1 MGTAGYATISRQSGLMREMRVIANNIANSATTGYRQEGLIFSEFVQSSPGQ--PSVSMSR 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + S E G +TG DFA+EGD +F +E+P+G LTR G F G LV+ G Sbjct: 59 ANIFNTSMEQGQLTNTGGTFDFAIEGDGFFMIETPQGERLTRSGAFSPNAAGDLVTMDGY 118 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 LD P+ +P VG G +S G+++ +GL+ VR + Sbjct: 119 RV-LDAGRAPVFVPPDAGKIEVGADGSLSANGRLLGQLGLFKPVEKHTLVREDGVMFRVE 177 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 +E+ V +GFLE SN N++ E+ +MI + + + + + ++ + AI+N Sbjct: 178 GD---IEENFDSKVLQGFLEGSNVNAISEVSRMIDVQRAYEMGQSFLQTEDERIRNAIKN 234 Query: 241 I 241 + Sbjct: 235 L 235 >gi|209545588|ref|YP_002277817.1| flagellar basal body rod protein [Gluconacetobacter diazotrophicus PAl 5] gi|209533265|gb|ACI53202.1| flagellar basal body rod protein [Gluconacetobacter diazotrophicus PAl 5] Length = 247 Score = 149 bits (375), Expect = 4e-34, Method: Composition-based stats. Identities = 67/245 (27%), Positives = 118/245 (48%), Gaps = 8/245 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----DIDQKI 56 M+ + I L+ L + L A+N++N +T GF+ K FS+ + K+ D++ Sbjct: 1 MENTTYIALSRVDVLSRALEVTANNLANANTDGFKASKELFSDYLVQQKDVHGLPGDKEE 60 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVS 116 + Y + G+ TG DFA+ G+ +FA+ + +G+ LTR+G F DG++V Sbjct: 61 VYTQDRSTYQDRLQGALRQTGNLTDFAINGEGYFAVRTTQGVRLTRNGEFNRRADGTIVD 120 Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 SG P++D + IP +D +V G +S + +AT+ L +VD V Sbjct: 121 GSGN-PLIDRNGNNVVIPPRDHTLSVASDGTMSTETGRVATLDLVTVDNPNTLVPEGGYL 179 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + P P +++ +++G LE SN N++ E QM+ + + ++ LI Sbjct: 180 LRPTT---PTRNVANKEIRQGMLESSNVNAVSETTQMVEIQRDYDLTFQLIQTESTRQSN 236 Query: 237 AIRNI 241 AI I Sbjct: 237 AIDKI 241 >gi|120598233|ref|YP_962807.1| flagellar basal body rod protein FlgF [Shewanella sp. W3-18-1] gi|120558326|gb|ABM24253.1| flagellar basal-body rod protein FlgF [Shewanella sp. W3-18-1] Length = 247 Score = 149 bits (375), Expect = 4e-34, Method: Composition-based stats. Identities = 45/238 (18%), Positives = 86/238 (36%), Gaps = 7/238 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M I ++ L+ +N++N +T GF++ + + + F Sbjct: 1 MDKFLYISMSGAKQNMNELALRGNNLANANTDGFKSDMAQARSM--QAFGEGLPTRVFAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASG 119 + G +TG +LD A++GD WFA++ TR G G L + G Sbjct: 59 IETPSANFRSGPIKTTGRDLDVAIKGDGWFAVQAKDGAEAYTRSGSLSFDATGLLHNDRG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 + D + + +P + + +G + V+ + R Sbjct: 119 NPVMGDAGPIVLPLPIDKVTISQDGIISVRPQGATAEVIEEVGRLKLVNPGNAQMMRGED 178 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 G+ + V V+ G +E SN N + EM +I L ++F ++ E+ Sbjct: 179 GLFRLVSGNDAPADPNVAVESGAVEGSNVNPVDEMVSLIELQRQFEMQVKMMKTAEEI 236 >gi|2916790|emb|CAA11956.1| flagellar basal-body rod protein [Sinorhizobium meliloti] Length = 229 Score = 149 bits (375), Expect = 4e-34, Method: Composition-based stats. Identities = 104/230 (45%), Positives = 155/230 (67%), Gaps = 4/230 (1%) Query: 13 LALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGS 72 +ALE+RL+T+ADN++N++TVGFR +VKF++V+G K K+S+V+ G+E+LS + G+ Sbjct: 1 MALEKRLNTLADNIANSNTVGFRATEVKFNQVLGDTK---PTKVSYVSEGEEFLSTKTGA 57 Query: 73 FISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQ 132 TG+ LDFA++GDAWF++++P G LTRDGRF +T+ G LV+ G PVLD PIQ Sbjct: 58 LARTGSALDFAIKGDAWFSIDTPGGPALTRDGRFTLTETGELVTIKGY-PVLDAGGAPIQ 116 Query: 133 IPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV 192 + VG G I Q G IA +GLY D S+GF+R +NS P P P+ D V Sbjct: 117 LNGGAGEIAVGADGAIHQNGVQIALLGLYEADFSKGFMRYDNSSDMPAAQPEPVVDRFDV 176 Query: 193 TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 V +GFLE+SN N++ EM Q+I +T+ F+++T L+ ++E S+ +AI + Sbjct: 177 GVMQGFLEESNVNAIQEMSQLIMITRAFDNVTALMRDSEGSLDKAIETLG 226 >gi|163750569|ref|ZP_02157807.1| flagellar basal-body rod protein FlgF [Shewanella benthica KT99] gi|161329724|gb|EDQ00713.1| flagellar basal-body rod protein FlgF [Shewanella benthica KT99] Length = 246 Score = 149 bits (375), Expect = 4e-34, Method: Composition-based stats. Identities = 47/238 (19%), Positives = 92/238 (38%), Gaps = 7/238 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + ++ L+ A+N++N +T GF+ + + + F Sbjct: 1 MDKLLYVAMSGAKQNMNSLAVRANNLANANTDGFKADMAQARSM--QAFGEGLPTRVFAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119 + G +TG +LD A++GD W A++S G TR G G L + G Sbjct: 59 TESPSADFTAGPIKTTGRDLDIAVKGDGWIAVQSADGGEAYTRSGSLSFDTTGLLRNDRG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG---KVIATMGLYSVDMS-QGFVRRENS 175 + D + + +P + + G +VI +G + + R Sbjct: 119 NPIMGDAGPIVLPLPIEKIEIAQDGTISVRPLGATAEVIEVVGRIKLVNPGNQNLMRGED 178 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 G+ I + +T++ G +E SN N++ EM +I + ++F ++ E+ Sbjct: 179 GLFRLISGDNAPADAFITLESGAVEGSNVNAVSEMVALISIQRQFEMQVKMMKTAEEM 236 >gi|27381995|ref|NP_773524.1| flagellar basal body rod protein FlgF [Bradyrhizobium japonicum USDA 110] gi|27355165|dbj|BAC52149.1| flagellar basal body rod protein [Bradyrhizobium japonicum USDA 110] Length = 242 Score = 149 bits (375), Expect = 4e-34, Method: Composition-based stats. Identities = 80/242 (33%), Positives = 136/242 (56%), Gaps = 4/242 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 MQ++ +GL+AQ+ALE+RL T+A+N++N +T FRT VKF V+ + ++F + Sbjct: 1 MQSALYVGLSAQVALEKRLQTIANNVANVNTAAFRTDVVKFETVLSKAGAN---PVAFSS 57 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 G +S+E G+ +G LD A+ G W A P G + TRDGR ++ +G L + +G Sbjct: 58 PGDNIISRETGNITESGNPLDVAVVGQGWLAFAGPNGTVYTRDGRLQIAANGDLQTVAG- 116 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 +PV+D I + ++ G I+Q I T+GL+++ R NSG++P+ Sbjct: 117 FPVIDAGGAQITLDPNGGPVSIARSGAITQDNNEIGTIGLFNIPTDANLERYGNSGVTPD 176 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 P T + D S K+G++E S AN M E+ +++ ++ F+ ++I+ E S+ AIR Sbjct: 177 RPATAIADFSRDGFKQGYVEGSGANPMMELTKLMAASRAFDGTNSMIEGTESSLQNAIRT 236 Query: 241 IA 242 + Sbjct: 237 LG 238 >gi|330445349|ref|ZP_08309001.1| flagellar basal-body rod protein FlgF [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489540|dbj|GAA03498.1| flagellar basal-body rod protein FlgF [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 249 Score = 149 bits (375), Expect = 4e-34, Method: Composition-based stats. Identities = 56/241 (23%), Positives = 99/241 (41%), Gaps = 11/241 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + ++ + A+N++N +T GFR + + + F Sbjct: 1 MDRALYLAMSGAKQDMYGMQVHANNLANVNTTGFRADLQQARSM--QAYGEGMPSRVFSM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + GS I+TG +LD A++GD W A+ + TR G K+ G L +++G Sbjct: 59 AERPGNDFAQGSVINTGRDLDVAIQGDGWLAVMDAKGQEAYTRAGHLKIDQTGMLQNSNG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172 +L PI IP +G+ G +S + + VD +Q + Sbjct: 119 -QLLLGQNDSPIFIPLPISKIEIGKDGTVSVLPQGAPPDAMAVVDRIKLVSVDNQALFKD 177 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 + P++ + VT+ +G LE SN N++ EM MI L + F L+ E+ Sbjct: 178 TDGLFKLTGDRIPMDADANVTLAKGMLEGSNVNAVSEMTSMIDLQRHFEMQVKLMKTAEE 237 Query: 233 S 233 Sbjct: 238 M 238 >gi|90579910|ref|ZP_01235718.1| putative flagellar basal-body rod protein FlgF [Vibrio angustum S14] gi|90438795|gb|EAS63978.1| putative flagellar basal-body rod protein FlgF [Vibrio angustum S14] Length = 249 Score = 149 bits (375), Expect = 4e-34, Method: Composition-based stats. Identities = 58/241 (24%), Positives = 98/241 (40%), Gaps = 11/241 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + ++ + A+N++N T GFR + + + F Sbjct: 1 MDRALYLAMSGAKQDMYGMQVHANNLANVSTTGFRADLQQARSM--QAYGEGLPSRVFSM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119 + + GS I+TG +LD A+EGD W A ++ TR G K+ G L +++G Sbjct: 59 AERPGNDFAQGSVINTGRDLDVAVEGDGWLAVMDVKGQEAYTRAGHLKIDQTGMLQNSNG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172 + L PI IP +G+ G +S + + VD +Q + Sbjct: 119 QLV-LGQNDSPIFIPLPISKIEIGKDGTVSVLPQGAPPDAMAVVDRIKLVKPDNQALFKD 177 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 + PL+ + VT+ +G LE SN N++ EM MI L + F L+ E+ Sbjct: 178 TDGLFKSIGERIPLDADASVTLAKGMLEGSNVNAVSEMTSMIDLQRHFEMQVKLMKTAEE 237 Query: 233 S 233 Sbjct: 238 M 238 >gi|332296626|ref|YP_004438549.1| flagellar hook-basal body protein [Thermodesulfobium narugense DSM 14796] gi|332179729|gb|AEE15418.1| flagellar hook-basal body protein [Thermodesulfobium narugense DSM 14796] Length = 255 Score = 149 bits (375), Expect = 4e-34, Method: Composition-based stats. Identities = 50/251 (19%), Positives = 96/251 (38%), Gaps = 13/251 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA------IKNDIDQ 54 M S ++ L+ + L VA+N+SN +T GF+ F++V+ + + Q Sbjct: 1 MDNSIFTAVSGALSSQSALDVVANNISNVNTTGFKESNPTFADVLSQELSFATSRTNPLQ 60 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSL 114 + LS G ++T DFA+ G +F + TRDG F + +G+L Sbjct: 61 IGAGSKLDSTSLSFTQGPVLTTNDPTDFAISGSGFFVVSDGTNTYYTRDGSFSLDSNGNL 120 Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM------GLYSVDMSQG 168 V+A G Y ++ I K+ + + + Sbjct: 121 VTADGLYVQGTNGNINIDTTSKNFVNFTVKPDGSVYSNFSNGQSVLDGKIMVVDFINKNA 180 Query: 169 FVRRENSGISPNIP-PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 + + SP++ P+ +G ++ + LE SN + +M +I + + I Sbjct: 181 LINVGGNNFSPSVNSGNPVALSNGYSIIQNALEGSNTDLATQMANLIDYERTYQVNAQAI 240 Query: 228 DENEKSMLEAI 238 ++ + AI Sbjct: 241 TTSDSMLQTAI 251 >gi|294508678|ref|YP_003572737.1| flagellar basal-body rod protein [Salinibacter ruber M8] gi|294345007|emb|CBH25785.1| flagellar basal-body rod protein [Salinibacter ruber M8] Length = 260 Score = 149 bits (375), Expect = 4e-34, Method: Composition-based stats. Identities = 45/244 (18%), Positives = 96/244 (39%), Gaps = 7/244 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M F AA + + VA+N++N T G++ +V + + D Sbjct: 20 MLPRFQNAAAAMSEMRLQQEQVANNLANASTTGYKKDRVFTEALNERLTKDGSPISD--R 77 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRFKVTDDGSLVSAS 118 ++ GS TG LD AL + +F + TR G F V G+L + Sbjct: 78 RLEQANDLSGGSLKETGNPLDVALGDEGFFVTQPRGGGAERYTRAGHFVVGSQGTLRTPE 137 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178 G+ + + + + + Q +I + + G I+ + + + + + + + R + + Sbjct: 138 GREVMGEGGPIQLPVEQGGDIS-ISKSGRITAGQQRVGALRVATFENPEQLERTSGASFA 196 Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 + V +G +E SN + + E+ MI + ++F + I + + A Sbjct: 197 --AGDAQPQAAENPVVLQGKVETSNVDPVTELTNMIEIQRQFEAQQKTIQTTDGVLGRAT 254 Query: 239 RNIA 242 +++ Sbjct: 255 QSLG 258 >gi|254462007|ref|ZP_05075423.1| flagellar basal-body rod protein FlgF [Rhodobacterales bacterium HTCC2083] gi|206678596|gb|EDZ43083.1| flagellar basal-body rod protein FlgF [Rhodobacteraceae bacterium HTCC2083] Length = 237 Score = 149 bits (375), Expect = 4e-34, Method: Composition-based stats. Identities = 63/241 (26%), Positives = 112/241 (46%), Gaps = 6/241 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M+ + L Q L + +S +A N++N +T G+R + FSEV+ + +S Sbjct: 1 MENASYTTLTRQSGLMREMSVIASNIANANTTGYRQEGLIFSEVIKGESD--APSLSMAT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + S G+ TG D A++GD +F +++P G L+R G F + G LV+ G Sbjct: 59 ARARATSLAPGTITQTGGPYDVAIDGDGFFQIQTPGGTRLSRAGHFMPNNQGDLVTPDGY 118 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 LD P+ IPQ ++ G +S KG+++ +G+ +R + + Sbjct: 119 RV-LDAGGAPLGIPQGTGKISISADGTLSSKGQLLGQLGIVQPSTGTQILREDGVHFRAD 177 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 P E V++GFLE SN N M ++ +MI + + + + + + + A+R Sbjct: 178 G---PTEPNFDARVRQGFLEGSNVNPMSQIARMIEVQRAYEMGQSFAETENERLRNAVRT 234 Query: 241 I 241 I Sbjct: 235 I 235 >gi|217972599|ref|YP_002357350.1| flagellar basal body rod protein FlgF [Shewanella baltica OS223] gi|217497734|gb|ACK45927.1| flagellar basal-body rod protein FlgF [Shewanella baltica OS223] Length = 247 Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats. Identities = 45/238 (18%), Positives = 90/238 (37%), Gaps = 7/238 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + ++ L+ A+N++N +T GF++ + + + F Sbjct: 1 MDKFLYVAMSGAKQNMNELALRANNLANANTDGFKSDMAQARSM--QAFGEGLPSRVFAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASG 119 + + G +TG +LD A++GD WFA++ TR G G L + G Sbjct: 59 TESPSANFRSGPIKTTGRDLDVAIKGDGWFAVQAKDGSEAYTRAGSLSFDSTGLLHNDRG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 + D + + +P + + + +G + V+ + R Sbjct: 119 NPVMGDAGPIVLPLPIEKVSISQDGIISVRPQGATAEVVEEVGRLKLVNPGNAEMMRGED 178 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 G+ + V V+ G +E SN N + EM +I L ++F ++ E++ Sbjct: 179 GLFRLVSGNIAPADPSVGVESGAVEGSNVNPVDEMVSLIDLQRQFELQVKMMKTAEEN 236 >gi|153001471|ref|YP_001367152.1| flagellar basal body rod protein FlgF [Shewanella baltica OS185] gi|160876202|ref|YP_001555518.1| flagellar basal body rod protein FlgF [Shewanella baltica OS195] gi|151366089|gb|ABS09089.1| flagellar basal-body rod protein FlgF [Shewanella baltica OS185] gi|160861724|gb|ABX50258.1| flagellar basal-body rod protein FlgF [Shewanella baltica OS195] gi|315268392|gb|ADT95245.1| flagellar basal-body rod protein FlgF [Shewanella baltica OS678] Length = 247 Score = 148 bits (374), Expect = 5e-34, Method: Composition-based stats. Identities = 45/238 (18%), Positives = 90/238 (37%), Gaps = 7/238 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + ++ L+ A+N++N +T GF++ + + + F Sbjct: 1 MDKFLYVAMSGAKQNMNELALRANNLANANTDGFKSDMAQARSM--QAFGEGLPTRVFAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASG 119 + + G +TG +LD A++GD WFA++ TR G G L + G Sbjct: 59 TESPSANFRSGPIKTTGRDLDVAIKGDGWFAVQAKDGSEAYTRAGSLSFDSTGLLHNDRG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 + D + + +P + + + +G + V+ + R Sbjct: 119 NPVMGDAGPIVLPLPIEKVSISQDGIISVRPQGATAEVVEEVGRLKLVNPGNAEMMRGED 178 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 G+ + V V+ G +E SN N + EM +I L ++F ++ E++ Sbjct: 179 GLFRLVSGNIAPADPSVGVESGAVEGSNVNPVDEMVSLIDLQRQFELQVKMMKTAEEN 236 >gi|71281915|ref|YP_268223.1| flagellar basal-body rod protein FlgF [Colwellia psychrerythraea 34H] gi|71147655|gb|AAZ28128.1| flagellar basal-body rod protein FlgF [Colwellia psychrerythraea 34H] Length = 247 Score = 148 bits (374), Expect = 5e-34, Method: Composition-based stats. Identities = 54/248 (21%), Positives = 100/248 (40%), Gaps = 7/248 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M I ++ Q LS A+N++N T GF+ + + + F Sbjct: 1 MDKLLYIAMSGAKQNMQALSINANNLANAKTTGFKADLAQARSM--QAFGEGLPSRVFSM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + + + GS + TG LD A+EG+ +FA+++ TR G F++T+ G+L + G Sbjct: 59 TERASQNFDSGSILHTGRSLDMAIEGEGFFAVQAEDGQEAYTRGGHFRLTETGALETNDG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 + + + + + +P + + + G + V+ V + N Sbjct: 119 ELVIGENGPITLPLPINNIQISRDGTIMVQPAGAPSSVQEEVGRIKLVNPDTRLVDKGND 178 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 G+ L V V G LE SN N + EM MI L ++F ++ E+ Sbjct: 179 GLFRAKNGGQLIADVNVNVLGGALESSNVNPINEMTDMIALQRQFEMQLKMMKTAEEIDS 238 Query: 236 EAIRNIAS 243 A + + Sbjct: 239 SASSLLRA 246 >gi|225871945|ref|YP_002753399.1| flagellar basal-body rod protein FlgG [Acidobacterium capsulatum ATCC 51196] gi|225791437|gb|ACO31527.1| flagellar basal-body rod protein FlgG [Acidobacterium capsulatum ATCC 51196] Length = 262 Score = 148 bits (374), Expect = 5e-34, Method: Composition-based stats. Identities = 48/259 (18%), Positives = 94/259 (36%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + L T+A+N++N+ TVGFR +++F +++ Sbjct: 1 MIRALYTAASGMSAQQMNLDTIANNLANSSTVGFRERQLQFQDMIYQNLVTPGAAQSQQA 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFK 107 Q S L G T LD A++G +F ++ P G TR G F Sbjct: 61 VSAGLQIGLGTKSAATELIMTQGDLNQTNNPLDLAIQGQGFFQVQRPDGTLAYTRAGNFY 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDMS 166 + + G +V G + ++ + V Q + + + L + Sbjct: 121 LNNQGQVVDPQGDLLIPNITVPQNATAVTITQYGVVNATLPGQQNPQQLGQIQLATFVNP 180 Query: 167 QGFVRRENSGISPNIP------PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ + P T+++G+LE+SN + + QM+ + + Sbjct: 181 GGLESTGSNDYLATLSSGNAVLGNPGGQQGLGTLQQGYLENSNVDVVGAFVQMVLAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 S + +I + E Sbjct: 241 ESNSKVIKAADGMYSEVNN 259 >gi|28211310|ref|NP_782254.1| flagellar basal body rod protein FlgG [Clostridium tetani E88] gi|28203750|gb|AAO36191.1| flagellar hook-basal body complex protein [Clostridium tetani E88] Length = 260 Score = 148 bits (374), Expect = 5e-34, Method: Composition-based stats. Identities = 50/261 (19%), Positives = 102/261 (39%), Gaps = 23/261 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVV----------GA 47 M ++ + E + + V +N++N T GF++ + F +V+ Sbjct: 1 MIRGLYTAVSGMITEEAKQNVVTNNLANVTTPGFKSDNLSVKQFDDVLLYNYDKKVGNKN 60 Query: 48 IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP----RGIILTRD 103 +++D+ + + G T DFA++G +F +E + TR+ Sbjct: 61 VRHDLGGLSMGSKIDEVNTYFQQGMLEKTDRATDFAIQGKGFFVVEREGQGGNERLYTRN 120 Query: 104 GRFKVTDDGSLVSASGKYPVL--DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLY 161 G F V + G LV+ SG + + I E F + ++G I G T+ + Sbjct: 121 GHFYVNNRGFLVNDSGYNVIGRNNDTGAVEPIRLNTENFTLTKEGNILVDGNTTYTLQVA 180 Query: 162 SVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221 + + + + VK+ LE SN N++ EM +M+ + + F Sbjct: 181 DFQNYNDLRKVGHDAY----TGNNAVNSTDYIVKQNTLEKSNVNTIREMIEMMTVMRTFE 236 Query: 222 SITTLIDENEKSMLEAIRNIA 242 + +I + ++ +A+ I Sbjct: 237 TNQKIIQSIDDTLGKAVNEIG 257 >gi|114777905|ref|ZP_01452819.1| flagellar basal-body rod protein FlgG [Mariprofundus ferrooxydans PV-1] gi|114551692|gb|EAU54244.1| flagellar basal-body rod protein FlgG [Mariprofundus ferrooxydans PV-1] Length = 251 Score = 148 bits (374), Expect = 5e-34, Method: Composition-based stats. Identities = 37/248 (14%), Positives = 84/248 (33%), Gaps = 20/248 (8%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID--------------QKIS 57 A + +++N++N +T GF+ + F +++ Q Sbjct: 1 MAAQSLNVDVISNNIANVNTNGFKRGRANFQDLMYQQIKAPGAEASAAGTQLPTGIQVGL 60 Query: 58 FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVS 116 V + GSF T LD ++G +F ++ + TR G F + G +V+ Sbjct: 61 GVRTASVDSIFSEGSFQQTNNPLDLTIQGRGFFQVQLANGETAYTRAGSFSLDATGQIVT 120 Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 +G + + + + V+ + + G + + Sbjct: 121 QNGDVLQPGITIPADAQSIQIAQDGTVSVTQANATQTVLGQIQIADFLNPAGLAKLGGNL 180 Query: 177 ISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 P+ + ++ +G LE SN + + EM +I + + + I ++ Sbjct: 181 FQPSNASGTAVIGNPTENGLGSMTQGTLEMSNVSMVEEMVNLIAGQRAYEMNSKAIQASD 240 Query: 232 KSMLEAIR 239 + + A Sbjct: 241 EMLQTANN 248 >gi|284041497|ref|YP_003391837.1| fagellar hook-basal body protein [Conexibacter woesei DSM 14684] gi|283945718|gb|ADB48462.1| fagellar hook-basal body protein [Conexibacter woesei DSM 14684] Length = 232 Score = 148 bits (374), Expect = 5e-34, Method: Composition-based stats. Identities = 38/248 (15%), Positives = 90/248 (36%), Gaps = 29/248 (11%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIK---VKFSEVVGAIKNDI---DQ 54 M+ I + +A + R +A++++N T G++ + F +++ + N Sbjct: 1 MERGLYIAASGMIAEQMRQDAIANDLANASTPGYKADRITQASFGDLLLSNSNTGQVIGP 60 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSL 114 + + + + T LD A+ G+ WF +++P G+ TR+G+F + G L Sbjct: 61 LGTGAYADSKVTDLRPQATRVTEEPLDLAIVGEGWFGVQTPEGVRYTRNGQFSASPQGQL 120 Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174 + G+ + + ++G++++ + R+E Sbjct: 121 IDQLGRPVLGPGGQPVQLDARGHVRP---------------GSVGVFALANA----RKEG 161 Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 + V+ G LE S + M MI + + + +I + ++ Sbjct: 162 DNYFTGAAGGQ----ATGQVEIGALEGSGIDPTRTMVDMIASFRAYEAGQKVITTIDDTL 217 Query: 235 LEAIRNIA 242 + Sbjct: 218 RRTSTQVG 225 >gi|170725956|ref|YP_001759982.1| flagellar basal body rod protein FlgF [Shewanella woodyi ATCC 51908] gi|169811303|gb|ACA85887.1| flagellar basal-body rod protein FlgF [Shewanella woodyi ATCC 51908] Length = 247 Score = 148 bits (374), Expect = 5e-34, Method: Composition-based stats. Identities = 44/240 (18%), Positives = 87/240 (36%), Gaps = 7/240 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + ++ L+ A+N++N +T GF+ + + + F Sbjct: 1 MDKLLYVAMSGAKQNMNALAVRANNLANANTDGFKADMEQARSM--QAFGEGLPTRVFAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASG 119 + + G +TG +LD A+ G W A++ + G TR G G L + G Sbjct: 59 TENPSANFSSGPIKTTGRDLDIAINGSGWIAVQGADGGEAYTRSGSLSFDTSGLLRNDRG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 + D + + +P + + G + V+ G + R Sbjct: 119 NPIMGDSGPIVLPLPIEKVEIAQDGIISVRPLGATAEVIEEVGRIKLVNPGDGNMMRGAD 178 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 G+ + V V+ G +E SN N++ EM +I + ++F ++ E+ Sbjct: 179 GLFRQMSGEIAPADPRVAVESGAVEGSNVNAVDEMVSLIDIQRQFEMQVKMMKTAEEMDQ 238 >gi|94263288|ref|ZP_01287104.1| conserved hypothetical protein [delta proteobacterium MLMS-1] gi|94267693|ref|ZP_01290962.1| conserved hypothetical protein [delta proteobacterium MLMS-1] gi|94272297|ref|ZP_01292100.1| conserved hypothetical protein [delta proteobacterium MLMS-1] gi|93450173|gb|EAT01484.1| conserved hypothetical protein [delta proteobacterium MLMS-1] gi|93451895|gb|EAT02626.1| conserved hypothetical protein [delta proteobacterium MLMS-1] gi|93456371|gb|EAT06495.1| conserved hypothetical protein [delta proteobacterium MLMS-1] Length = 243 Score = 148 bits (374), Expect = 5e-34, Method: Composition-based stats. Identities = 53/231 (22%), Positives = 103/231 (44%), Gaps = 6/231 (2%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 L E+RL VA+N++N DT G++ F E++ + D + + + G Sbjct: 16 MLGQERRLDQVANNLANVDTAGYKRQNTAFWEMLYNVTADRQRIGKGSHTLT---DHQQG 72 Query: 72 SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPI 131 + T LD A+ G+ +F +++ +G+ TR G F++ G L +G + D P+ Sbjct: 73 NVQQTDNPLDLAINGEGFFRIQTDQGVRYTRAGNFELDPLGQLRMPNGGLVLGD--GGPV 130 Query: 132 QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSG 191 I + + +G+I Q +I + + +V+ + + + L Sbjct: 131 VIDEAGGEVAIDPQGQIHQNQVMIGQLDIVTVNDLTTLAKEGENLFRLEDDGEEMAALDF 190 Query: 192 VTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 V++G++E SN NS+ EM MI L + + + +I ++ AI + Sbjct: 191 -QVRQGYVEKSNVNSIEEMTAMIDLYRNYEAQQKMIQGIDEMDDLAISRVG 240 >gi|170758330|ref|YP_001787958.1| flagellar basal body rod protein FlgG [Clostridium botulinum A3 str. Loch Maree] gi|169405319|gb|ACA53730.1| flagellar basal body rod protein [Clostridium botulinum A3 str. Loch Maree] Length = 263 Score = 148 bits (374), Expect = 5e-34, Method: Composition-based stats. Identities = 51/264 (19%), Positives = 105/264 (39%), Gaps = 24/264 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI----------KN 50 M + + +A + +L ++++N++N +TVG++ V F E+V + Sbjct: 1 MLRALWNSKSGLIAQQNKLDSISNNLANVNTVGYKREDVSFQELVQETLKRKGYPTSDRQ 60 Query: 51 DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVT 109 +I A+ + + G ++TG + D A++G +F + G R G F + Sbjct: 61 EIQTGTGVKATNWIRDTHQQGILLNTGNKTDLAIDGQGFFRVIMSDGNYAYERSGNFVID 120 Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-----------IATM 158 +G LV +G + I++ G + + + Sbjct: 121 RNGMLVDENGNRLEIQFQGTEGMQILNRIGGFSRNNINIAEDGSISVKDIDGINKMVGKI 180 Query: 159 GLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 +Y+ S FV + P + + V++ +GFLE+SN ++ EM +MI + Sbjct: 181 NIYNAVGSDAFVSIGRNLYIPQ-EGVNVFANNDVSILQGFLENSNVDAGKEMTEMIITQR 239 Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242 F + I ++ M + N+ Sbjct: 240 AFELSSRGIKTADE-MWGIVNNMR 262 >gi|56551505|ref|YP_162344.1| flagellar basal body rod protein FlgG [Zymomonas mobilis subsp. mobilis ZM4] gi|241761149|ref|ZP_04759238.1| flagellar basal-body rod protein FlgG [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|260752888|ref|YP_003225781.1| flagellar basal body rod protein FlgG [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|4378856|gb|AAD19724.1| flagellar basal-body rod protein [Zymomonas mobilis subsp. mobilis ZM4] gi|56543079|gb|AAV89233.1| flagellar basal-body rod protein FlgG [Zymomonas mobilis subsp. mobilis ZM4] gi|241374768|gb|EER64229.1| flagellar basal-body rod protein FlgG [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|258552251|gb|ACV75197.1| flagellar basal-body rod protein FlgG [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 263 Score = 148 bits (374), Expect = 5e-34, Method: Composition-based stats. Identities = 45/257 (17%), Positives = 93/257 (36%), Gaps = 20/257 (7%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID----------- 53 + A R+ +A+N++N +T F+ + F + + Sbjct: 6 LQVARTGLDAQNTRMRIIANNLANVNTTAFKRDRAAFETLAYQAERQPGAQSTNSYYYAT 65 Query: 54 --QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTD 110 S V + + GSF++TG LD A+ G +F ++ P G I TR G F+++ Sbjct: 66 GLTLGSGVQTIATERQETQGSFVNTGNSLDLAVSGVGYFQIQLPDGTIGYTRAGNFQLSQ 125 Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169 DG +V+ GK + ++ E V + + + + + G Sbjct: 126 DGQIVTDDGKPLIPNINIPQNAEQITIGEDGTVSVQLQGQTQSNQVGQIQTVRFINPAGL 185 Query: 170 VRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224 + + + +G LE SN N + E+ MI + + + Sbjct: 186 QATGQNLYIETQSSGQPQIGLPQQDGMGYILQGELEQSNVNIVQELVDMIETQRAYEVNS 245 Query: 225 TLIDENEKSMLEAIRNI 241 ++ +++ + + I Sbjct: 246 KMVKASDEMLQYINQQI 262 >gi|261211321|ref|ZP_05925609.1| flagellar basal-body rod protein FlgF [Vibrio sp. RC341] gi|260839276|gb|EEX65902.1| flagellar basal-body rod protein FlgF [Vibrio sp. RC341] Length = 249 Score = 148 bits (374), Expect = 5e-34, Method: Composition-based stats. Identities = 56/241 (23%), Positives = 102/241 (42%), Gaps = 11/241 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + ++ Q + A+N++N T GFR + + + F Sbjct: 1 MDRALFLAMSGAKQNMQAMQLRANNLANVSTTGFRADLAQARSM--QAYGEGLPTRVFSM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASG 119 + + + GS I+TG +LD ++G+ W ++ + LTR+G ++ + G L++ +G Sbjct: 59 TERPGNNFAQGSVITTGRDLDVTIQGEGWISVLDKTGKEGLTRNGNLRIDETGLLLNGNG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172 +PVL PI +P +G G IS + + + VD Q + Sbjct: 119 -HPVLGETGAPITLPVPLNKVEIGGDGTISVRPQGAPADAMEVVDRIKLVRLNDQSLFKD 177 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 N P T E + V + G LE SN N++ EM +I L ++F ++ E+ Sbjct: 178 VNGLFRATDPNTQFEADASVKILTGALEGSNVNAIGEMTSLIDLQRQFEMQVKMMSTAEE 237 Query: 233 S 233 Sbjct: 238 M 238 >gi|157376215|ref|YP_001474815.1| flagellar basal body rod protein FlgF [Shewanella sediminis HAW-EB3] gi|157318589|gb|ABV37687.1| flagellar basal-body rod protein FlgF [Shewanella sediminis HAW-EB3] Length = 247 Score = 148 bits (374), Expect = 5e-34, Method: Composition-based stats. Identities = 44/238 (18%), Positives = 91/238 (38%), Gaps = 7/238 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + ++ L+ A+N++N +T GF++ + + + F Sbjct: 1 MDKLLYVAMSGAKQNMNSLAVRANNLANANTDGFKSDMAQARSM--QAFGEGLPTRVFAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119 + + G +TG +LD A++GD W A+++ G TR G G L + G Sbjct: 59 TESPSANFASGPIKTTGRDLDVAVKGDGWIAVQAGDGGEAYTRSGSLSFDTTGLLRNDRG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 + D + + +P + + +G + V+ + R + Sbjct: 119 NPVMGDSGPIVLPLPIEKIEIAQDGIISVRPQGATAEVIEEVGRIKLVNPGNQNMMRGSD 178 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 G+ + V V+ G +E SN N++ EM +I + ++F ++ E+ Sbjct: 179 GLFRLMSGENAPADPFVGVESGAVEGSNVNAVDEMVNLIDIQRQFEMQVKMMKTAEEM 236 >gi|163852464|ref|YP_001640507.1| flagellar basal-body rod protein FlgG [Methylobacterium extorquens PA1] gi|218531220|ref|YP_002422036.1| flagellar basal-body rod protein FlgG [Methylobacterium chloromethanicum CM4] gi|240139801|ref|YP_002964278.1| flagellar biosynthesis; cell-distal portion of basal-body rod [Methylobacterium extorquens AM1] gi|254562216|ref|YP_003069311.1| cell-distal portion of basal-body rod biosynthesis protein [Methylobacterium extorquens DM4] gi|163664069|gb|ABY31436.1| flagellar basal-body rod protein FlgG [Methylobacterium extorquens PA1] gi|218523523|gb|ACK84108.1| flagellar basal-body rod protein FlgG [Methylobacterium chloromethanicum CM4] gi|240009775|gb|ACS41001.1| flagellar biosynthesis; cell-distal portion of basal-body rod [Methylobacterium extorquens AM1] gi|254269494|emb|CAX25460.1| flagellar biosynthesis; cell-distal portion of basal-body rod [Methylobacterium extorquens DM4] Length = 263 Score = 148 bits (374), Expect = 5e-34, Method: Composition-based stats. Identities = 34/259 (13%), Positives = 81/259 (31%), Gaps = 21/259 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55 + A E + +++N++N T G++ +V F +++ Sbjct: 1 MRALYAAATGMAAQELNVQVISNNIANLRTTGYKRQQVHFQDLLYQNLRRSGSSTSDQNT 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 S V + + G T + D A+ G+ F + P +RDG F Sbjct: 61 MLPAGLALGSGVKTTSTARAMSQGPLAQTEKDYDVAIRGEGLFRVRLPDGRTAYSRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 + G +V+ G + V + + L Sbjct: 121 DLDAQGQMVTRDGYLLDPGVTVPNTATSVTISATGAVQATMPGQTAPQALGQFQLARFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ P +++ +LE++N N++ E+ +I + + Sbjct: 181 KVGLESIGDNLFVETAASGPAITGLPGSEGFGNLQQRYLEEANVNAVTEISSLIAAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + ++ ++ + + Sbjct: 241 EMNSKVVTAADQMLSTTSQ 259 >gi|163802602|ref|ZP_02196494.1| flagellar L-ring protein precursor H [Vibrio sp. AND4] gi|159173685|gb|EDP58504.1| flagellar L-ring protein precursor H [Vibrio sp. AND4] Length = 249 Score = 148 bits (374), Expect = 6e-34, Method: Composition-based stats. Identities = 61/241 (25%), Positives = 101/241 (41%), Gaps = 11/241 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + ++ Q L A+N++N T GFR + + + F Sbjct: 1 MDRALFLAMSGAKQNMQALQLRANNLANVSTTGFRADLAQARSM--QAYGEGLPSRVFSM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119 + + + GS I+TG +LD +EGD W + ++ LTR+G KV +G L +ASG Sbjct: 59 TERPGHNFAQGSVITTGRDLDVTIEGDGWISVMDHTGKEGLTRNGNLKVDQNGLLTNASG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172 + VL PI +P +G G IS + L VD Q + Sbjct: 119 -HVVLGENDAPITLPIPVSKIEIGRDGTISVLPQGAPAEELEVVDRIKLVRTDDQNLFKD 177 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 N P P E ++++ G +E SN N++ EM +I L ++F ++ E+ Sbjct: 178 TNGLFRHKTPNQPYEVDGSISIQTGAIEGSNVNAVGEMTALIDLQRQFEMQVKMMSTAEE 237 Query: 233 S 233 Sbjct: 238 M 238 >gi|302037627|ref|YP_003797949.1| flagellar basal-body rod protein FlgF [Candidatus Nitrospira defluvii] gi|300605691|emb|CBK42024.1| Flagellar basal-body rod protein FlgF [Candidatus Nitrospira defluvii] Length = 255 Score = 148 bits (373), Expect = 6e-34, Method: Composition-based stats. Identities = 53/260 (20%), Positives = 103/260 (39%), Gaps = 26/260 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-------- 52 M + L+ +A E++L+ A+N++N +T GF+ + F + + Sbjct: 1 MNRAIYPILSGAVAQEKQLTVFANNLANVNTAGFKQDQQGFRGLFARASSTGTGVVSGGL 60 Query: 53 ----------DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTR 102 + F + E G TG LD A++ D +F +++P G+ TR Sbjct: 61 SSAISTRPAGPSERVFAEVHGVRTAFEPGRIRITGNPLDVAIQSDGFFEVKTPDGVRYTR 120 Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162 +G F + LV+ G + +I + +G I G I ++ + Sbjct: 121 NGIFSLDSQRRLVTNLGHPVM----GTKGEIKVPPGNIQINAEGAIQVDGTPIGSIKVVE 176 Query: 163 VDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222 G ++ G+ + V+ G +E+SN NS+ EM +M+ + + S Sbjct: 177 FP-ENGMPQKFAEGLFV---GGKPAVSTRPQVQSGHIEESNVNSLSEMVKMMQGMRSYES 232 Query: 223 ITTLIDENEKSMLEAIRNIA 242 LI ++ AI+++ Sbjct: 233 AQKLIQTMDRMTETAIQDLG 252 >gi|206603526|gb|EDZ40006.1| Putative flagellar basal body rod protein [Leptospirillum sp. Group II '5-way CG'] Length = 267 Score = 148 bits (373), Expect = 6e-34, Method: Composition-based stats. Identities = 50/265 (18%), Positives = 99/265 (37%), Gaps = 26/265 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK----------- 49 M+ + ++ A EQ + + +N++N +T GF+ +V F + + Sbjct: 1 MRQAEFALVSGAQAQEQLMDVLTNNLANVNTPGFKRDRVTFRTYLPHREWLHKTPSDQPG 60 Query: 50 -------------NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR 96 + + ++ GSF STG LD A++G+ +F + +PR Sbjct: 61 FRMTPWGEFPTPWGMAGKDVPHAGVDGIHVGYAQGSFRSTGNPLDIAIKGEGFFRILTPR 120 Query: 97 GIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156 G +L+R+GRF + G LV+ G + + V G + + +V+ Sbjct: 121 GEVLSRNGRFTLDRGGRLVTHEGYGVLGEDGKNIRLPESVPGGIRVKADGTVLKGNRVMG 180 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + + + + + G+ V G E SN N +EM +MI Sbjct: 181 RLAVVVPENGTEHLAKVGDGLFMGDGKIAPVADPD--VLAGGFESSNVNGTFEMVRMIEA 238 Query: 217 TQKFNSITTLIDENEKSMLEAIRNI 241 + F + + + + +I Sbjct: 239 MRSFETHLKALQTLNELTRRTVNDI 263 >gi|126653740|ref|ZP_01725658.1| flagellar hook protein [Bacillus sp. B14905] gi|126589704|gb|EAZ83840.1| flagellar hook protein [Bacillus sp. B14905] Length = 329 Score = 148 bits (373), Expect = 6e-34, Method: Composition-based stats. Identities = 55/319 (17%), Positives = 101/319 (31%), Gaps = 80/319 (25%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-------- 52 M S G++ + +L + +N++N +TVGF+ +V F +++ + Sbjct: 8 MLRSMYSGISGLKNFQTKLDVIGNNIANVNTVGFKKGRVLFKDLMSQTQAGASAATATRG 67 Query: 53 ----DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP------------- 95 Q GS STG LD A+EGD +F + Sbjct: 68 GVNPQQVGLGTQLAAIDTIHGGGSLQSTGRGLDLAIEGDGFFMVADANGAPDPDSGFIDE 127 Query: 96 ---RGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNV---------- 142 + TR+G F + +G LV+A GKY V A I + D+ N Sbjct: 128 EGFNNTLFTRNGVFYMDSNGYLVNADGKYLVGVSAGEDIVMEADDDGINPDDAPVASGDE 187 Query: 143 -----GEKGEISQKGKVIATMGLYS--------------------------------VDM 165 + G ++ + + + + Sbjct: 188 GANLFDDDGVLTPDDGTVGPIRIPTTAKEISIGANGTIEYVDLNGERKWAGQLIMAKFPN 247 Query: 166 SQGFVRRENSGISPNIP-----PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 + G + + V G +E SN + E +MI + F Sbjct: 248 AGGLAKSGGNYYQQTANSGAAYGQVATVAGMGKVVPGAVEMSNVDLSEEFTEMIVAQRGF 307 Query: 221 NSITTLIDENEKSMLEAIR 239 + T +I +++ + E + Sbjct: 308 QANTRIITTSDEVLQELVN 326 >gi|91225874|ref|ZP_01260843.1| polar flagellar FlgF [Vibrio alginolyticus 12G01] gi|254230139|ref|ZP_04923534.1| flagellar basal-body rod protein FlgF [Vibrio sp. Ex25] gi|262394938|ref|YP_003286792.1| flagellar basal-body rod protein FlgF [Vibrio sp. Ex25] gi|269965423|ref|ZP_06179542.1| flagellar basal-body rod protein FlgF [Vibrio alginolyticus 40B] gi|91189524|gb|EAS75800.1| polar flagellar FlgF [Vibrio alginolyticus 12G01] gi|151937332|gb|EDN56195.1| flagellar basal-body rod protein FlgF [Vibrio sp. Ex25] gi|262338532|gb|ACY52327.1| flagellar basal-body rod protein FlgF [Vibrio sp. Ex25] gi|269829902|gb|EEZ84132.1| flagellar basal-body rod protein FlgF [Vibrio alginolyticus 40B] Length = 249 Score = 148 bits (373), Expect = 6e-34, Method: Composition-based stats. Identities = 60/241 (24%), Positives = 101/241 (41%), Gaps = 11/241 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + ++ Q L A+N++N T GFR + + + F Sbjct: 1 MDRALFLAMSGAKQNMQALQLRANNLANVSTTGFRADLAQARSM--QAYGEGHPSRVFSM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASG 119 + + + GS I+TG +LD +EG W ++ + LTR+G KV +G L +ASG Sbjct: 59 TERPGHNFAQGSVITTGRDLDVTIEGSGWISVLDHTGKEGLTRNGNLKVDQNGMLTNASG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172 + VL PI +P +G G IS + +VD Q + Sbjct: 119 -HLVLGENDAPITLPIPLSKIEIGRDGTISVLPQGAPAEEFQAVDRIKLVKPNDQSLFKD 177 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 N P P E + V+++ G +E SN N++ EM +I L ++F ++ E+ Sbjct: 178 TNGLFRHKTPNQPYEADATVSLQTGAIEGSNVNAVGEMTALIDLQRQFEMQVKMMSTAEE 237 Query: 233 S 233 Sbjct: 238 M 238 >gi|167835112|ref|ZP_02461995.1| flagellar basal body rod protein FlgF [Burkholderia thailandensis MSMB43] Length = 253 Score = 148 bits (373), Expect = 6e-34, Method: Composition-based stats. Identities = 54/250 (21%), Positives = 85/250 (34%), Gaps = 10/250 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-----QK 55 M + ++ S VA+N++N T GFR F V + Sbjct: 1 MDRLIYTAMTGAAQSLEQQSVVANNLANASTTGFRAQLATFRAVPMNFDDGSGNVDPATT 60 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSL 114 ++ S G TG LD A++G W ++ P TR G V +G L Sbjct: 61 RTYTLSSTPGADFAPGPIERTGNPLDVAVQGPGWLSVMLPDGTEAYTRAGNLHVDQNGQL 120 Query: 115 VSASGKYPVLDMAS---VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171 V+A+ V + P V V L V+ ++ Sbjct: 121 VTANNLPVVGNGGPLAVPPNAQLTIGADGTVSALMPGDPPTAVAMIDQLKLVNPDPATMK 180 Query: 172 RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 R + G+ P + + V V LE SN N + M MI + F T LI + Sbjct: 181 RGDDGLFRTADGNPADADAAVKVVPNSLEGSNVNPVAAMVSMIDNARAFELQTKLIQSAD 240 Query: 232 KSMLEAIRNI 241 ++ +A + Sbjct: 241 QN-EQAANQL 249 >gi|288574696|ref|ZP_06393053.1| protein of unknown function DUF1078 domain protein [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570437|gb|EFC91994.1| protein of unknown function DUF1078 domain protein [Dethiosulfovibrio peptidovorans DSM 11002] Length = 262 Score = 148 bits (373), Expect = 7e-34, Method: Composition-based stats. Identities = 47/263 (17%), Positives = 92/263 (34%), Gaps = 24/263 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDIDQKIS 57 M G++A + + A+N++N DT GFR K F EV+ + + Sbjct: 1 MHKGIYAGVSAMMVQQGVTDCAANNLANVDTAGFRARKPIAKSFPEVLMERVDPAKGQGE 60 Query: 58 FVASGKEYLSKEVGSFIS----------------TGTELDFALEGDAWFA--LESPRGII 99 S T + +D AL + F + Sbjct: 61 IPPWPWRSHPIGNASMNQVLSETYMSTDEGNLQVTDSPMDVALTDEEGFFVLQDGEGNQF 120 Query: 100 LTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG 159 +R G F V + G LV+ G V D + + + + + G++ G +A + Sbjct: 121 YSRSGHFLVNEGGQLVNPDGYLLVGDGGPIDV---GEAAAVSFTDDGQVIADGIAVAQID 177 Query: 160 LYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 + + + + ++ + V G LE SN N + EM ++I + Sbjct: 178 IVGFESPTALRQMGKNLLAETEDSGAPAPVEVPQVAVGVLERSNVNVVEEMVRLIEAQRA 237 Query: 220 FNSITTLIDENEKSMLEAIRNIA 242 + + + I ++ + I ++A Sbjct: 238 YEAASKGIQTSDDMTGQLITSLA 260 >gi|294140186|ref|YP_003556164.1| flagellar basal-body rod protein FlgF [Shewanella violacea DSS12] gi|293326655|dbj|BAJ01386.1| flagellar basal-body rod protein FlgF [Shewanella violacea DSS12] Length = 247 Score = 148 bits (373), Expect = 7e-34, Method: Composition-based stats. Identities = 47/238 (19%), Positives = 93/238 (39%), Gaps = 7/238 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + ++ L+ A+N++N +T GF+ + + + F Sbjct: 1 MDKLLYVAMSGAKQNMNSLAVRANNLANANTDGFKADMEQARSM--QAFGEGLPTRVFAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119 + G +TG +LD A++GD W A++S G TR G G L + G Sbjct: 59 TESPSADFAAGPIKTTGRDLDIAVKGDGWIAVQSADGGEAYTRSGSLSFDTTGLLRNDRG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG---KVIATMGLYSVDMS-QGFVRRENS 175 + D + + +P + + + G +VI +G + + R Sbjct: 119 NPIMGDSGPIVLPLPIEKVSISQDGIISVRPLGSTAEVIEVVGRIKLVNPGNQNLMRGED 178 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 G+ I + +T++ G +E SN N++ EM +I + ++F ++ E+ Sbjct: 179 GLFRLISGDNAPADAFITIESGAVEGSNVNAVSEMVALIDIQRQFEMQVKMMKTAEEM 236 >gi|188587424|ref|YP_001918969.1| protein of unknown function DUF1078 domain protein [Natranaerobius thermophilus JW/NM-WN-LF] gi|179352111|gb|ACB86381.1| protein of unknown function DUF1078 domain protein [Natranaerobius thermophilus JW/NM-WN-LF] Length = 280 Score = 148 bits (372), Expect = 8e-34, Method: Composition-based stats. Identities = 54/276 (19%), Positives = 102/276 (36%), Gaps = 34/276 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51 M + L ++ ++NM+N +T G + +FS ++ + ND Sbjct: 1 MLRGLYTSSSGMLTQQRVQEVKSNNMANLNTTGHKRDMSVKSEFSNMLISRINDPENIGP 60 Query: 52 -----------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL 100 I + + V + G TG LD LEGD +F + P G Sbjct: 61 PQSPQVDNRPYIGELGTGVLLDETVKDFSQGPLKETGNTLDLGLEGDGFFTVNGPDGEEY 120 Query: 101 -TRDGRFK-----VTDDGSLVSASGKYPVLDMASVP-IQIPQKDEIFNVGEKGEISQKGK 153 TR G +++ +LV+ G + + + N + + Sbjct: 121 FTRSGALTLSYDETSEEATLVTLQGDPVLGEEGIIQLSGEKDITVTENGAIYQGQDDEAE 180 Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPL-------EDLSGVTVKRGFLEDSNANS 206 +I + L + + QG R ++ + ED ++V +G +E SN NS Sbjct: 181 LIDNLALVNFENPQGLARYGDNLLEQTEESGAPQELDLDGEDFGILSVHQGKIESSNVNS 240 Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 + EM MI+ + + S I ++ ++ A+ +I Sbjct: 241 VDEMTGMINALRAYESNQRAIQGHDDTLERAVNDIG 276 >gi|254519397|ref|ZP_05131453.1| flagellar basal body rod protein FlgG [Clostridium sp. 7_2_43FAA] gi|226913146|gb|EEH98347.1| flagellar basal body rod protein FlgG [Clostridium sp. 7_2_43FAA] Length = 257 Score = 148 bits (372), Expect = 8e-34, Method: Composition-based stats. Identities = 43/258 (16%), Positives = 93/258 (36%), Gaps = 17/258 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + G A + +L +++N++N+ T+G++ I V F +++ + Sbjct: 1 MLRTLWTGKTGMNANQDKLDAISNNIANSTTMGYKKIDVGFKDLLTESLDRNGIPLNDKD 60 Query: 54 -QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDD 111 + + + + G T D +++G +F + S TRDG + Sbjct: 61 SVIGTGTRTSEWFRDNSQGMLQETLRSTDLSIDGLGYFKIISDNGQEAYTRDGALAIDSR 120 Query: 112 GSLVSASGKYPVLD------MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 G LV G L+ +V + +A + +Y+ Sbjct: 121 GRLVDNRGNKLELNYLNGYSEGNVVFNKDNFLVDKKGQVYIKDKGNFIQVAEIPVYTAVG 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225 + F+ + P ++ + + +G LE SN + E +MI + F + Sbjct: 181 DRAFLS-IGDNLFTPSPGVEVQRTTDFDIYQGSLEGSNVDIATEFSEMILTQRAFELSSR 239 Query: 226 LIDENEKSMLEAIRNIAS 243 + ++ M I N+ + Sbjct: 240 GVKTADE-MWGMINNMRA 256 >gi|149912833|ref|ZP_01901367.1| flagellar basal-body rod protein FlgF, putative [Roseobacter sp. AzwK-3b] gi|149813239|gb|EDM73065.1| flagellar basal-body rod protein FlgF, putative [Roseobacter sp. AzwK-3b] Length = 237 Score = 148 bits (372), Expect = 9e-34, Method: Composition-based stats. Identities = 61/241 (25%), Positives = 111/241 (46%), Gaps = 6/241 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M+ + L Q L + + +A+N++N T G+R + F+E V ++N IS Sbjct: 1 MENTGYTTLTRQSGLLREIQVIANNIANAATTGYREESLIFAEYVKRVEN--GPSISMAT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 +S G TG LDFA+EGD +F +E+ G LTR G F ++ G L + G Sbjct: 59 PSARSISSLQGGLQPTGGTLDFAIEGDGFFLIEAADGNRLTRAGSFSLSAAGELATHDGH 118 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 LD P+ +P V G IS +G++I +GL +R + + Sbjct: 119 RV-LDAGGAPVFLPPNATDLRVAADGTISAEGRLIGQIGLVRPLDPNDLIREGGTLFRTD 177 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 + P+E + +GFLE SN + + ++ +M+ + + + + ++ + E ++ Sbjct: 178 VGTKPVEG---SRILQGFLEGSNVDPIAQVARMVEVQRAYEMGQSFLENENTRIRETLKT 234 Query: 241 I 241 + Sbjct: 235 M 235 >gi|75675315|ref|YP_317736.1| flagellar basal body rod protein FlgF [Nitrobacter winogradskyi Nb-255] gi|74420185|gb|ABA04384.1| Flagellar basal body rod protein [Nitrobacter winogradskyi Nb-255] Length = 255 Score = 148 bits (372), Expect = 9e-34, Method: Composition-based stats. Identities = 56/252 (22%), Positives = 114/252 (45%), Gaps = 11/252 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN-----DIDQK 55 M+ + IGL+ Q+ LE+++ +A+N++N T G++ F+E + + D++ Sbjct: 1 MENTLLIGLSRQMMLERQMDVIANNVANVTTNGYKADHSLFNEYLMPGAHEDNFVGRDRR 60 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115 +SFV + G T LD A++G+A+ +++P G TRDG ++ G LV Sbjct: 61 LSFVQDRATFHDFAGGPTEQTKNPLDVAIDGNAFLVVQTPNGERYTRDGGLQINAQGQLV 120 Query: 116 SASGKYPVLDM-----ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170 +A G + I D+ +G + + + L S Q V Sbjct: 121 TAGGHPVLGSNGPIRFQQTDRNITISDDGTVTVIEGINNATNAIRGRLRLVSFPQVQRLV 180 Query: 171 RRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + ++ + + + + +GF+E SN N++ EM +++ +++ + + TL+ + Sbjct: 181 KEGSNLYAAGEGNFARQ-DTQARINQGFIERSNVNAVTEMSRLVEVSRAYTQMATLLQQQ 239 Query: 231 EKSMLEAIRNIA 242 AI +A Sbjct: 240 SDLQRSAIEKLA 251 >gi|134300226|ref|YP_001113722.1| hypothetical protein Dred_2387 [Desulfotomaculum reducens MI-1] gi|134052926|gb|ABO50897.1| protein of unknown function DUF1078 domain protein [Desulfotomaculum reducens MI-1] Length = 257 Score = 148 bits (372), Expect = 9e-34, Method: Composition-based stats. Identities = 60/255 (23%), Positives = 107/255 (41%), Gaps = 14/255 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVV---------GAI 48 M I + + + +L+ V +N+SN T G++ + F+E + G Sbjct: 1 MLRGLYITMNSLNVQQAKLNNVTNNLSNLSTTGYKKNNMVDSQFAESLQLALENHGPGGK 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFK 107 + I + I + ++ G TG D ALEG+ +F +E G LTRDG F Sbjct: 61 RQPIGKGILGNMITQVHIDYGQGPLTETGKLTDMALEGNGYFVVEDENGEQFLTRDGSFH 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 V ++G+L++ G L I +D + Q + L V++S+ Sbjct: 121 VNEEGALLTGDGFRV-LGEGGPIILEKPEDFTLKEDGTIMVGQGTEAEEIDKLQIVEVSE 179 Query: 168 GFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 + ++ G P E TV +G+LE SN + + EM +I + + + S LI Sbjct: 180 PALLKKTDGNYFQDPEGVAEAAVSTTVTQGWLEKSNVDPVQEMINIIPVARIYESSQKLI 239 Query: 228 DENEKSMLEAIRNIA 242 ++ + +AI + Sbjct: 240 QIQDELLDKAINQVG 254 >gi|91792665|ref|YP_562316.1| flagellar basal body rod protein FlgF [Shewanella denitrificans OS217] gi|91714667|gb|ABE54593.1| Flagellar basal-body rod FlgF [Shewanella denitrificans OS217] Length = 247 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 43/240 (17%), Positives = 94/240 (39%), Gaps = 7/240 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + ++ L+ A+N++N +T GF++ + + + F Sbjct: 1 MDKFLYVAMSGAKQNMSALAVRANNLANANTDGFKSDLTQARSM--QAFGEGLPSRVFAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + G+ +TG +LD A++GD W A+++P TR G K + G L+++ Sbjct: 59 TEIATSDFKAGALKTTGRDLDIAVKGDGWIAVQAPDGSEAYTRSGGLKFDNTGLLLNSRN 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS----VDMSQGFVRRENS 175 + + + + +P + I +G + + V+ + R Sbjct: 119 NPVMGNSGPIVLPLPIDKLQISPDGIISIRPQGATAEVIEEVARIKLVNPDNSQMMRGED 178 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 G+ V V+ G +E SN N + EM +I + +++ ++ E++ Sbjct: 179 GLFRLTSGDVAAKDPSVQVESGAIEASNVNPVEEMVALISIQRQYEMQVKMMKTAEETDQ 238 >gi|220924578|ref|YP_002499880.1| flagellar basal-body rod protein FlgG [Methylobacterium nodulans ORS 2060] gi|219949185|gb|ACL59577.1| flagellar basal-body rod protein FlgG [Methylobacterium nodulans ORS 2060] Length = 263 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 35/259 (13%), Positives = 85/259 (32%), Gaps = 21/259 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55 + A E + +++N++N T G++ + F +++ Sbjct: 1 MRALYAAATGMAAQELNVQVISNNIANLRTTGYKRQQAHFQDLLYQNLRRAGSATSDQGN 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 S V + G+ ST D A+ G+ +F + P TRDG F Sbjct: 61 QLPAGLALGSGVKTTSTARVMSQGTLSSTEKTYDIAIRGEGFFQITLPDGRTAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDM 165 + G +V+ G + V + + + L Sbjct: 121 DLDSQGQIVTRDGYLINPSITVPNNATGVTISASGMVQATVPGQTAPQNLGQIQLARFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ + + P + +++ +LE++N N++ E+ +I + + Sbjct: 181 KVGLESIGDNLFTETLASGPAITGNPGAEGFGNLQQSYLEEANVNAVTEISSLIAAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + ++ ++ + + Sbjct: 241 EMNSKVVTAADQMLSTTSQ 259 >gi|167568108|ref|ZP_02361024.1| flagellar basal body rod protein FlgF [Burkholderia oklahomensis EO147] gi|167574226|ref|ZP_02367100.1| flagellar basal body rod protein FlgF [Burkholderia oklahomensis C6786] Length = 253 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 55/250 (22%), Positives = 86/250 (34%), Gaps = 10/250 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-----QK 55 M + ++ S VA+N++NT T GFR F V + Sbjct: 1 MDRLIYTAMTGATQSLEQQSVVANNLANTSTTGFRAQLATFRAVPMNFDDGSGNVDPSTT 60 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSL 114 ++ S G TG LD A++G W ++ P TR G V +G L Sbjct: 61 RTYTLSSTPVADFTPGPIERTGNPLDVAVQGPGWLSVMLPDGTEAYTRAGNLHVDQNGQL 120 Query: 115 VSASGKYPVLDMAS---VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171 V+A+ V + P + V V L V+ ++ Sbjct: 121 VTANNLPVVGNGGPLAVPPNAQLTIGQDGTVSALMPGDPPTAVAMIDQLKLVNPDPAAMK 180 Query: 172 RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 R + G+ P + V V LE SN N + M MI + F T LI + Sbjct: 181 RGDDGLFRTADGNPADADPAVRVVPNSLEGSNVNPVAAMVSMIDNARAFELQTKLIQSAD 240 Query: 232 KSMLEAIRNI 241 ++ +A + Sbjct: 241 QN-EQAANQL 249 >gi|331269338|ref|YP_004395830.1| flagellar basal-body rod protein FlgG [Clostridium botulinum BKT015925] gi|329125888|gb|AEB75833.1| flagellar basal-body rod protein FlgG [Clostridium botulinum BKT015925] Length = 263 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 50/265 (18%), Positives = 105/265 (39%), Gaps = 27/265 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVV----------GA 47 M ++ + E +++N++N TVG++ + F +V+ Sbjct: 1 MIRGIYTAVSGLINQEAIQDVISNNLANATTVGYKKDDLITRKFKDVMLHNYDKVVRGKN 60 Query: 48 IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF----ALESPRGIILTRD 103 ++NDI + + + G TG DFA++G+ +F + TRD Sbjct: 61 VRNDIGELSMGSKIDETCTNYSQGVLNDTGKSTDFAIQGNGFFVVSRNGRVNNQNLYTRD 120 Query: 104 GRFKVTDDGSLVSASGKYP------VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157 G F + +G LV++SG + + + + ++GEI G+ Sbjct: 121 GHFHIDRNGYLVNSSGDKVIGRNLANGANSPINVLVNNSPAKMACNDRGEIYLNGRPAFK 180 Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217 M + + + + +++ S P + V VK+ LE SN N M E+ M+ Sbjct: 181 MQVVNFGDYKSLRKIQDNLYSGTNP----RETDNVIVKQNCLEKSNVNVMAEVSDMMMTM 236 Query: 218 QKFNSITTLIDENEKSMLEAIRNIA 242 + F S ++ ++++ + + + Sbjct: 237 RNFESNQKIVQALDETLGKTVNEVG 261 >gi|323341378|ref|ZP_08081622.1| flagellar basal-body rod protein FlgG [Lactobacillus ruminis ATCC 25644] gi|323091255|gb|EFZ33883.1| flagellar basal-body rod protein FlgG [Lactobacillus ruminis ATCC 25644] Length = 301 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 50/298 (16%), Positives = 102/298 (34%), Gaps = 59/298 (19%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50 M S G++ + ++ +A+N+SN +T GF+ +V F ++V Sbjct: 1 MLRSLYSGVSGMKGFQTQMDVIANNVSNVNTHGFKAGRVLFQDMVSQNTTSASAPGLGLG 60 Query: 51 --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG------IILTR 102 + Q + +G G+ STG ++D ++G+ +F + TR Sbjct: 61 GVNGKQVGLGMQTGAVDTMTGRGNMESTGQDMDLYIQGEGYFVVRKEATADSDAVTYYTR 120 Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLY- 161 DG FK G LV+++G + I + + G + G +A + + Sbjct: 121 DGAFKRDSQGLLVNSNGYHVKGQPTKGNIPAAWDNNFKSENYFGNPNATGSNLADINIPE 180 Query: 162 -----------------------------------SVDMSQGFVRRENSGISPNIPPTPL 186 + G + ++ S Sbjct: 181 TVNGQRFESVTIDNSGLVVAKYGDTRYAMGKIELAKFNNPSGLKKSGSNNFSVTNNSGDP 240 Query: 187 ED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 T++ GFLE SN + + QMI ++ + + + I +++ + E + Sbjct: 241 NFATPGLGGTGTLESGFLEMSNVDLADQFSQMIIASRAYQANSRSITTSDEMLQELLN 298 >gi|114330362|ref|YP_746584.1| flagellar basal body rod protein FlgF [Nitrosomonas eutropha C91] gi|114307376|gb|ABI58619.1| flagellar basal-body rod protein FlgF [Nitrosomonas eutropha C91] Length = 247 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 50/241 (20%), Positives = 90/241 (37%), Gaps = 6/241 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + L + +TV+ N++N T GFR F V + + +FV Sbjct: 1 MDRLIYTAMTGALHTLTQQATVSHNLANASTTGFRAQADAFRAV--PVYGESLPTRAFVL 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 G+ T LD A++G W ++ TR G K +G L + G Sbjct: 59 DSTTGADFTPGAIQQTDRPLDVAIQGSGWITVQLENGEEAYTRHGNLKTDANGVLQTQQG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176 + + I + I G + ++ A + VD + R + G Sbjct: 119 FNIKGETGPITIPPDSRVAIGKDGSVSVLPSDSRITAVSIIGRIKLVDPPAEQLVRGDDG 178 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + V + G LE SN N++ EM +MI L ++F+ +++ +++ + Sbjct: 179 LFRLKQGGEAPASGKVALIDGALESSNVNAVSEMVKMITLARQFDMQMKMLENAQQNAQQ 238 Query: 237 A 237 A Sbjct: 239 A 239 >gi|27363704|ref|NP_759232.1| flagellar basal body rod protein FlgF [Vibrio vulnificus CMCP6] gi|27359820|gb|AAO08759.1| flagellar basal-body rod protein FlgF [Vibrio vulnificus CMCP6] Length = 249 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 60/241 (24%), Positives = 96/241 (39%), Gaps = 11/241 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + ++ Q L A+N++N T GFR + + D F Sbjct: 1 MDRALFLAMSGAKQNMQALQLRANNLANVSTTGFRADLAQARSM--QAYGDGLPTRVFSM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESP-RGIILTRDGRFKVTDDGSLVSASG 119 + + + GS I+TG +LD +EG+ W + LTR+G KV +G L +ASG Sbjct: 59 TERPGHNFAQGSVITTGRDLDITIEGNGWIGVMDKLGKEGLTRNGNLKVDQNGLLSNASG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172 + VL PI IP +G G IS + + +D + Sbjct: 119 -HLVLGEGGAPITIPLPVSKIEIGRDGTISVLPQGAPAEEMEEIDRIKLVKTNDSALFKD 177 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 N P P E V + G +E SN N++ EM +I L ++F ++ E+ Sbjct: 178 TNGLFRHKEPNQPYEADPTVQIMTGAIEGSNVNAVGEMTALIDLQRQFEMQVKMMSTAEE 237 Query: 233 S 233 Sbjct: 238 M 238 >gi|187778772|ref|ZP_02995245.1| hypothetical protein CLOSPO_02367 [Clostridium sporogenes ATCC 15579] gi|187772397|gb|EDU36199.1| hypothetical protein CLOSPO_02367 [Clostridium sporogenes ATCC 15579] Length = 266 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 52/263 (19%), Positives = 106/263 (40%), Gaps = 24/263 (9%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI----------KND 51 + + +A + +L ++++N++N +TVG++ V F E+V + + Sbjct: 5 LRALWNSKSGLIAQQNKLDSISNNLANVNTVGYKREDVSFQELVQETLKRKGYPTSDRPE 64 Query: 52 IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTD 110 I A+ + + G ++TG + D A++G +F + P G R G F + Sbjct: 65 IQTGTGVKATNWIRDTHQQGILLNTGNKTDLAIDGQGFFRVIMPDGNYAYERSGNFVIDR 124 Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-----------IATMG 159 +G LV +G + + I++ G + I + Sbjct: 125 NGMLVDENGNRLEIQLQQPAGSQILNRIGGFNKNNINIAEDGSISAKDVDGINKMIGKIN 184 Query: 160 LYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 +Y+ S FV + P + + V++ +GFLE+SN ++ EM +MI + Sbjct: 185 IYNAVGSDAFVSIGRNLYIPQ-EGVNVFVNNDVSMLQGFLENSNVDAGKEMTEMIITQRA 243 Query: 220 FNSITTLIDENEKSMLEAIRNIA 242 F + I ++ M + N+ Sbjct: 244 FELSSRGIKTADE-MWGIVNNLR 265 >gi|182679722|ref|YP_001833868.1| flagellar basal body rod protein [Beijerinckia indica subsp. indica ATCC 9039] gi|182635605|gb|ACB96379.1| flagellar basal body rod protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 240 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 68/242 (28%), Positives = 135/242 (55%), Gaps = 4/242 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 MQ++ + L+ Q+ LE+RL+T+A N++N G+R V FS ++ +++ Sbjct: 1 MQSNLYVSLSGQVMLERRLTTIATNIANQSVAGYRAEDVNFSTILSKTD---KYPVAYAG 57 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 +G+ ++S+E G T LD A++GD WFA+++P G + TRDGR + G LV + Sbjct: 58 TGRTHISREAGLLSKTDNPLDVAIQGDGWFAMQTPAGTVYTRDGRMHMQATGELV-SVDN 116 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 +P+LD + P+ + + + G I+Q G+ I +GL+ +D + NSG+ + Sbjct: 117 HPILDAGNTPLLVDPDAGPITIAKDGMITQNGRQIGAIGLFQLDDNAKLQHYHNSGVLSD 176 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 + D + + +G++E +N N + E+ ++I +++ F I+T ++ +E S+ ++I+ Sbjct: 177 RQGVAVLDFTANGIAQGYVESANVNPILELSKLITVSRSFEQISTAMENSESSLRDSIKT 236 Query: 241 IA 242 + Sbjct: 237 LG 238 >gi|195952534|ref|YP_002120824.1| flagellar basal-body rod protein FlgG [Hydrogenobaculum sp. Y04AAS1] gi|195932146|gb|ACG56846.1| flagellar basal-body rod protein FlgG [Hydrogenobaculum sp. Y04AAS1] Length = 263 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 51/259 (19%), Positives = 92/259 (35%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + A A +Q L +++NM+N DTVG++ ++ F +++ D Sbjct: 1 MFRAMWTSAAGMTAQQQNLDVISNNMANVDTVGYKQLQPVFDDLIYQTVKDPGMETSQNS 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q Y G+ TG LD A++G+ +F + P I TR+G+ Sbjct: 61 QNPIGYQLGLGAYIDGTYGIFTQGNVQQTGNPLDVAIQGNGFFQVAMPDGTIAYTRNGQL 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG-KVIATMGLYSVDM 165 ++ +G LV+A G + P Q+G + + + + + Sbjct: 121 QLDANGDLVTADGYLIQPQITVPPNATSVNIGPDGTVAVTIPGQQGVQTVGQLQMANFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G R N+ + T+ G+ E SN N + EM +I + Sbjct: 181 PAGLKRIGNNLFEQTQASGNPIVSNPGTQGLGTLLSGYTEASNVNIVNEMVNLIIAENAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + I + A Sbjct: 241 QFNSKGITAANTMLSTAAN 259 >gi|126175145|ref|YP_001051294.1| flagellar basal body rod protein FlgF [Shewanella baltica OS155] gi|125998350|gb|ABN62425.1| flagellar basal-body rod protein FlgF [Shewanella baltica OS155] Length = 247 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 45/238 (18%), Positives = 90/238 (37%), Gaps = 7/238 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + ++ L+ A+N++N +T GF++ + + + F Sbjct: 1 MDKFLYVAMSGAKQNMNELALRANNLANANTDGFKSDMAQARSM--QAFGEGLPTRVFAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASG 119 + + G +TG +LD A++GD WFA++ TR G G L + G Sbjct: 59 TESPSANFRSGPIKTTGRDLDVAIKGDGWFAVQAKDGSEAYTRAGSLSFDSTGLLHNDRG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 + D + + +P + + + +G + V+ + R Sbjct: 119 NPVMGDAGPIVLPLPIEKVSISQDGIISVRPQGATAEVVEEVGRLKLVNPGNAEMMRGED 178 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 G+ + V V+ G +E SN N + EM +I L ++F ++ E++ Sbjct: 179 GLFRLMSGNIAPADPSVGVESGAVEGSNVNPVDEMVSLIDLQRQFELQVKMMKTAEEN 236 >gi|118444095|ref|YP_878000.1| flagellar basal body rod protein FlgG [Clostridium novyi NT] gi|118134551|gb|ABK61595.1| flagellar basal-body rod protein FlgG [Clostridium novyi NT] Length = 258 Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 111/257 (43%), Gaps = 16/257 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S + A ++L+T+++NM+N+ TVG++ + VKF++++ + + Sbjct: 1 MLRSIWNSRSGMAAEMEKLNTISNNMANSTTVGYKRVDVKFNDLMQENLDRLGYPVTKGK 60 Query: 56 ----ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTD 110 + V + + G+ + TG D A++G+ +F ++ TR G F + + Sbjct: 61 PQFTGTGVRATEIERDNSQGNLLQTGNNTDIAIDGEGFFKVQDGEGRTFYTRGGSFNIDN 120 Query: 111 DGSLVSASGKYPVL----DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 G++V SG ++ + I K+ F + E+G + KG + ++ + Sbjct: 121 LGTVVDKSGNRLIILNEAGVNVNKPGIGFKNSSFIINEEGYVVGKGNENLRIPIFEPKGN 180 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGV-TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225 ++ N P +E + ++ +G+ E SN + EM +I + F ++ Sbjct: 181 DCMKSIGDNLYVCNEPNLIVEKDTKDFSLLQGYTEQSNVDLGKEMADLIITQRAFQLNSS 240 Query: 226 LIDENEKSMLEAIRNIA 242 + ++ M N+ Sbjct: 241 ALKTADE-MWGMANNLR 256 >gi|71906392|ref|YP_283979.1| hypothetical protein Daro_0753 [Dechloromonas aromatica RCB] gi|71846013|gb|AAZ45509.1| Protein of unknown function DUF1078 [Dechloromonas aromatica RCB] Length = 247 Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 51/241 (21%), Positives = 89/241 (36%), Gaps = 6/241 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + + A+N++N T+GF+ + +F V ++ + +FV Sbjct: 1 MDRLIYTAMTGAKHVFMQQAGTANNLANASTIGFKAQEHRFRAV--PVQGEGMPTRAFVV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G + TG LD A++G W ++ P TR G V G L + SG Sbjct: 59 DASVSDVMDEGPLMFTGRNLDVAVQGKGWIGVQLPDGSEAYTRAGSLDVDVTGLLQTKSG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176 D + I EI G + G + V+ + + R G Sbjct: 119 YPVAGDGGPINIPPDNTIEIAPDGTVSVVPTFGTPNNANAIGRIKLVNPPEADLVRGADG 178 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + P + V + G LE SN N M +I L+++F L+ + + Sbjct: 179 LFRLRNNQPAVADANVKLAAGTLEGSNVNVTDAMVNLISLSRQFEMQIKLLQTADTNAQR 238 Query: 237 A 237 A Sbjct: 239 A 239 >gi|127512280|ref|YP_001093477.1| flagellar basal body rod protein FlgF [Shewanella loihica PV-4] gi|126637575|gb|ABO23218.1| flagellar basal-body rod protein FlgF [Shewanella loihica PV-4] Length = 247 Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 45/240 (18%), Positives = 89/240 (37%), Gaps = 7/240 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + ++ L+ A+N++N +T GF++ + + + F Sbjct: 1 MDKLLYVAMSGAKQNMNSLAVRANNLANANTDGFKSDLEQARSM--QAFGEGLPTRVFSM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119 + + G +TG +LD A++GD W A+++ G TR G G L + G Sbjct: 59 TENPSANFAAGPIKTTGRDLDIAVKGDGWIAVQAVDGGEAYTRSGSLSFDTSGLLRNDRG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 + D + + +P + + G + V+ + R Sbjct: 119 NPVMGDAGPIVLPLPIEKVEIAQDGTISVRPLGSTAEVIEEVGRIKLVNPGNQNLMRGED 178 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 G+ + V V+ G +E SN N++ EM +I L ++F ++ E+ Sbjct: 179 GLFRQLSGVNAPADPNVAVESGAIEGSNVNAVDEMVSLIDLQRQFEMQVKMMKTAEEMDQ 238 >gi|317121026|ref|YP_004101029.1| flagellar hook-basal body protein [Thermaerobacter marianensis DSM 12885] gi|315591006|gb|ADU50302.1| flagellar hook-basal body protein [Thermaerobacter marianensis DSM 12885] Length = 289 Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats. Identities = 50/289 (17%), Positives = 96/289 (33%), Gaps = 48/289 (16%) Query: 1 MQ-TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA----------IK 49 M + A A +++ A+N++N +T GF+ + F+++V A Sbjct: 1 MIGRALWTSAAGMAAAARQVDVTANNLANVNTPGFKASRADFADLVYAALAVPASPATAA 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP--RGIILTRDGRFK 107 Q V S G STG+ D A++G +F + P ++LTR G F Sbjct: 61 AGGVQAGHGVRLAATPRSWRQGPLQSTGSPWDLAIDGAGFFQVVEPGTGEVLLTRGGAFV 120 Query: 108 VTDDGSL--------------------------VSASGKYPVLDMASVPIQIPQKDEIFN 141 ++ V+ P+L P+ +P + Sbjct: 121 LSPLPGGAPGAGPGEDPGQGPGGGPGGAGEALLVTDGAGRPLLRDDGRPLVLPAGARSWV 180 Query: 142 VGEKGEISQ-----KGKVIATMGLYSVDMSQGFVRRENSGISP---NIPPTPLEDLSGVT 193 V +GE+ + + L R +P + P Sbjct: 181 VTPEGEVRAVLAGGREVPAGRLALVVPAAPDALESRGEGLYAPGPGAVAALPPGQGGAGR 240 Query: 194 VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 V++G LE +N + EM +++ + + + ++ M I + Sbjct: 241 VRQGMLEQANVDLAVEMTRLLAAQRAYQLNARAVLTGDEMMG-LINRLR 288 >gi|325111113|ref|YP_004272181.1| flagellar basal-body rod protein FlgG [Planctomyces brasiliensis DSM 5305] gi|324971381|gb|ADY62159.1| flagellar basal-body rod protein FlgG [Planctomyces brasiliensis DSM 5305] Length = 267 Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats. Identities = 42/263 (15%), Positives = 93/263 (35%), Gaps = 24/263 (9%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG------------AIKN 50 + + + A +L +A+N++N+ T GF+ + +F ++ Sbjct: 4 RTLHSAASGMEASLFQLDVIANNLANSGTTGFKRSRAEFEDLFYEHFKLPGAQPAPQQTP 63 Query: 51 DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR--GIILTRDGRFKV 108 A + GS TG LD A+ GD +F ++ P TR G F Sbjct: 64 TGIAVGLGAAIRATQVDFTEGSLNQTGNSLDIAIMGDGFFQIQDPTGGDPYYTRAGTFTK 123 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNV----GEKGEISQKGKVIATMGLYSVD 164 +G++V +S + S+ I + + S + L Sbjct: 124 NSEGTIVMSSAQTGRPLEPSINIPPTAVNISITSNGEVWYQEAGSSTMTQAGQIQLARFV 183 Query: 165 MSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 ++G ++ + + + T+++GFLE SN + E+ ++I + Sbjct: 184 NNEGLIQMGENLYRASDASGVATISIPGQDGAGTLRQGFLETSNVEPVRELVELIKTQRN 243 Query: 220 FNSITTLIDENEKSMLEAIRNIA 242 + + ++ + + + + Sbjct: 244 VELNSEAMKAGDQML-QLVNGLR 265 >gi|37679148|ref|NP_933757.1| flagellar basal body rod protein FlgF [Vibrio vulnificus YJ016] gi|320157108|ref|YP_004189487.1| flagellar basal-body rod protein FlgF [Vibrio vulnificus MO6-24/O] gi|37197890|dbj|BAC93728.1| flagellar basal body rod protein FlgF [Vibrio vulnificus YJ016] gi|319932420|gb|ADV87284.1| flagellar basal-body rod protein FlgF [Vibrio vulnificus MO6-24/O] Length = 249 Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats. Identities = 59/241 (24%), Positives = 96/241 (39%), Gaps = 11/241 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + ++ Q L A+N++N T GFR + + + F Sbjct: 1 MDRALFLAMSGAKQNMQALQLRANNLANVSTTGFRADLAQARSM--QAYGEGLPTRVFSM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESP-RGIILTRDGRFKVTDDGSLVSASG 119 + + + GS I+TG +LD +EG+ W + LTR+G KV +G L +ASG Sbjct: 59 TERPGHNFAQGSVITTGRDLDITIEGNGWIGVMDKLGKEGLTRNGNLKVDQNGLLSNASG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172 + VL PI IP +G G IS + + +D + Sbjct: 119 -HLVLGEGGAPITIPLPVSKIEIGRDGTISVLPQGAPAEEMEEIDRIKLVKTNDSALFKD 177 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 N P P E V + G +E SN N++ EM +I L ++F ++ E+ Sbjct: 178 TNGLFRHKEPNQPYEADPTVQIMTGAIEGSNVNAVGEMTALIDLQRQFEMQVKMMSTAEE 237 Query: 233 S 233 Sbjct: 238 M 238 >gi|85712255|ref|ZP_01043306.1| Flagella basal body rod protein [Idiomarina baltica OS145] gi|85693882|gb|EAQ31829.1| Flagella basal body rod protein [Idiomarina baltica OS145] Length = 247 Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats. Identities = 48/241 (19%), Positives = 90/241 (37%), Gaps = 7/241 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M I ++ + +S A+N++NT+T GF+ + + + F Sbjct: 1 MDKMLWIAMSGANENMKAVSVRANNLANTNTTGFKADLEQARSM--QAFGEGLPTRVFSM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119 + + G +TG LD A+ G W A++ TR+G ++ G L ++SG Sbjct: 59 TESPGQNFAEGPIRTTGRNLDVAINGQGWIAVQDANGNERYTRNGSLEIDAGGMLRTSSG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS----VDMSQGFVRRENS 175 + D V I +P I +G + V+ V + Sbjct: 119 DPVMGDAGPVLIPMPIDSLTIGRNGNISIRPQGAPEDANEIVDRIKLVNPPLNNVEKTTD 178 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 G + V ++ G LE SN N++ EM MI L +++ ++ +++ Sbjct: 179 GYFALKDGQQALADANVKLEVGALEGSNVNAIGEMTSMIALQRQYEMNVKMMKTADENAQ 238 Query: 236 E 236 Sbjct: 239 R 239 >gi|304409977|ref|ZP_07391596.1| flagellar basal-body rod protein FlgF [Shewanella baltica OS183] gi|307302310|ref|ZP_07582068.1| flagellar basal-body rod protein FlgF [Shewanella baltica BA175] gi|304351386|gb|EFM15785.1| flagellar basal-body rod protein FlgF [Shewanella baltica OS183] gi|306914348|gb|EFN44769.1| flagellar basal-body rod protein FlgF [Shewanella baltica BA175] Length = 247 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 45/238 (18%), Positives = 90/238 (37%), Gaps = 7/238 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + ++ L+ A+N++N +T GF++ + + + F Sbjct: 1 MDKFLYVAMSGAKQNMNELALRANNLANANTDGFKSDMAQARSM--QAFGEGLPTRVFAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASG 119 + + G +TG +LD A++GD WFA++ TR G G L + G Sbjct: 59 TESPSANFRSGPIKTTGRDLDVAIKGDGWFAVQAQDGSEAYTRSGSLSFDSTGLLHNDRG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 + D + + +P + + + +G + V+ + R Sbjct: 119 NPVMGDAGPIVLPLPIEKVSISQDGIISVRPQGATAEVVEEVGRLKLVNPGNAEMMRGED 178 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 G+ + V V+ G +E SN N + EM +I L ++F ++ E++ Sbjct: 179 GLFRLMSGNIAPADPSVGVESGAVEGSNVNPVDEMVSLIDLQRQFELQVKMMKTAEEN 236 >gi|237653582|ref|YP_002889896.1| flagellar basal-body rod protein FlgF [Thauera sp. MZ1T] gi|237624829|gb|ACR01519.1| flagellar basal-body rod protein FlgF [Thauera sp. MZ1T] Length = 246 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 61/245 (24%), Positives = 95/245 (38%), Gaps = 5/245 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + VA N++N D GFR K V ++ + + +F Sbjct: 1 MDRLIYTAMTGAKGTMDQQAAVAHNLANVDATGFRAELHKLRAV--EVQTEALRTRAFTV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 G TG D AL G W A++ P TR+G V+ +G L + G Sbjct: 59 DASVANDFTEGPLQFTGRPFDVALAGKGWLAVQMPDGSEAYTRNGSLAVSANGVLQTRDG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKG--EISQKGKVIATMGLYSVDMSQGFVRRENSGI 177 + + D V I + I G + Q G V L V+ + + R + G+ Sbjct: 119 RPVLGDGGPVTIPPDNEITIGADGSVSALQPDQPGVVNVVAQLKLVNPPEAQLVRGDDGL 178 Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 P V V G+LE SN N + +M QMI L ++F T ++ E++ A Sbjct: 179 FRLQGGAPAPVDPNVRVAGGYLEGSNVNVVDQMVQMISLARQFEMQTRMLSTAEQNDRSA 238 Query: 238 IRNIA 242 R I Sbjct: 239 ARVIG 243 >gi|15895409|ref|NP_348758.1| flagellar basal body rod protein FlgG [Clostridium acetobutylicum ATCC 824] gi|15025132|gb|AAK80098.1|AE007715_3 Flagellar basal body rod protein [Clostridium acetobutylicum ATCC 824] Length = 258 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 45/260 (17%), Positives = 91/260 (35%), Gaps = 22/260 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKND------ 51 M ++ + E + + +N++NT+TVGF++ + F +V+ + Sbjct: 1 MVRGLYTAISGMVVQEAKQDVITNNLANTNTVGFKSDSLSSQSFEDVLIQNYSKRENGVP 60 Query: 52 ----IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR---GIILTRDG 104 + G+ +T + DFA++G +F + TR+G Sbjct: 61 ERTLLGTLNLGSRINDTATDFTGGNIQATDIDTDFAIQGRGFFTVRKNNGSDQNYYTRNG 120 Query: 105 RFKVTDDGSLVSASGKYPVLDM--ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162 F V DG ++ SG Y + + I I + G +S G Sbjct: 121 HFHVNMDGYMLDDSGDYIMGTNLATNTTEPIKLGKGIVSCDPYGNVSVDGPAKYKFNFVH 180 Query: 163 VDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222 + + ++ +V+ LE SN N M M M+ + F S Sbjct: 181 FNDYTKLKKIGDNLFQ----GDNPIQNFNASVENKALEGSNVNVMKGMTDMMTTMRVFES 236 Query: 223 ITTLIDENEKSMLEAIRNIA 242 + ++++ +A+ + Sbjct: 237 NQKTVQSIDETVGKAVNEVG 256 >gi|87306342|ref|ZP_01088489.1| FlgF [Blastopirellula marina DSM 3645] gi|87290521|gb|EAQ82408.1| FlgF [Blastopirellula marina DSM 3645] Length = 255 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 56/253 (22%), Positives = 91/253 (35%), Gaps = 14/253 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV---------GAIKND 51 M I A QR+ +A+N++N DT GF+ Sbjct: 1 MPYGLYIAAEGAQAQAQRVEVLANNIANVDTTGFKRDLAVLQARYSQAIEDGKDYPNSGS 60 Query: 52 IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDD 111 I+ V ++ G T D A+ GD +F +E LTR G F T D Sbjct: 61 INDVGGGVYVSEKVTDYSRGVLKGTNVPTDLAIAGDGFFQVEIDGETYLTRAGNFTFTAD 120 Query: 112 GSLVSASGKYP---VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 G+LV+ +G + V + E G + G V+ + + Sbjct: 121 GALVTPAGNAVLDAEGEPVQVDPEALANHVGNYFDENGFCTVGGDVV-PLAMVKPKSVSD 179 Query: 169 FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228 + ++ P P PL T + G+LE S NS+ EM MI + + + LI Sbjct: 180 LAKYGDNAFFPLAPVEPLALEERQT-RAGYLEGSGVNSITEMMTMIEAQRAYEANVNLIK 238 Query: 229 ENEKSMLEAIRNI 241 +++ + I + Sbjct: 239 NHDEMLGNLISRV 251 >gi|241766921|ref|ZP_04764727.1| flagellar basal-body rod protein FlgF [Acidovorax delafieldii 2AN] gi|241362625|gb|EER58473.1| flagellar basal-body rod protein FlgF [Acidovorax delafieldii 2AN] Length = 246 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 53/244 (21%), Positives = 94/244 (38%), Gaps = 5/244 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + A QR + +A+N++N T GFR F V ++ D + F Sbjct: 1 MDRIIYTSMTGANAAAQRQAVLANNLANASTQGFRAEMSTFRSV--PLQGDGSKTRVFAL 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119 + G TG LD G+AWF ++ TR G F+V+ G+L++++G Sbjct: 59 EATSGHLQTPGPVQRTGRALDAMAMGNAWFGVQGLDGLEAYTRAGGFEVSSAGTLLTSTG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS--QGFVRRENSGI 177 + D + P + G+ T+G + ++R + G+ Sbjct: 119 LTVLSDAGAPIDVPPGAEVSLGADGTISAKTAGQPATTIGRLKLATPTADNPLKRGDDGL 178 Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 PL + + G +E SN N++ M MI ++F L+ E + A Sbjct: 179 FRTTSGDPLPNDPTARMLAGAIEGSNVNAVESMVGMIAAARQFEQQMKLLQTAETNDKSA 238 Query: 238 IRNI 241 + + Sbjct: 239 SQLL 242 >gi|121607560|ref|YP_995367.1| flagellar basal-body rod protein FlgF [Verminephrobacter eiseniae EF01-2] gi|121552200|gb|ABM56349.1| flagellar basal-body rod protein FlgF [Verminephrobacter eiseniae EF01-2] Length = 246 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 55/245 (22%), Positives = 89/245 (36%), Gaps = 5/245 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + A R + +A+N++N T GFR F V ++ D + F Sbjct: 1 MDHIIYTTMTGAGAAAYRQAVLANNLANISTGGFRAQLSTFRSV--PLQGDGAKTRVFAL 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 G TG LD G AWFA++ P TR G F+++ G L++ G Sbjct: 59 EATSGYDDSAGPVQHTGRNLDALAAGRAWFAVQGPDGTEAYTRAGSFELSPTGQLLTPGG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS--QGFVRRENSGI 177 + D + P D G+ T+G + + ++R G+ Sbjct: 119 LPVLSDAGTPIDMPPGADITLGADGSISAKVAGQPAQTVGRLKLATPGAEDPLQRGGDGL 178 Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 PL + + G LE SN N + M MI ++F L+ + + A Sbjct: 179 FRTASGEPLPSDADARMLAGALEGSNVNPVECMVGMIAAARQFEQQMQLLQTAQTNDKSA 238 Query: 238 IRNIA 242 R + Sbjct: 239 SRLLG 243 >gi|23100412|ref|NP_693879.1| flagellar basal-body rod protein [Oceanobacillus iheyensis HTE831] gi|22778645|dbj|BAC14913.1| flagellar basal-body rod protein [Oceanobacillus iheyensis HTE831] Length = 269 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 48/272 (17%), Positives = 104/272 (38%), Gaps = 36/272 (13%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDIDQKI- 56 M + + +++ ++++N++N +T G++ + F E++ Q Sbjct: 1 MLRGLYTAASGMITQQRQQESLSNNIANANTPGYKADQTTIRAFPELLLQQTGSSSQIPT 60 Query: 57 -----------------SFVASGKEYLSKEVGSFISTGTELDFAL--------EGDAWFA 91 + V + + G TG D A+ G +F+ Sbjct: 61 SQGGMNFPISQTIGPINTGVYVQETVPNFAQGDVQETGLSTDVAIIQGQVPDENGFLFFS 120 Query: 92 LESPR-GIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ 150 +++ LTR+G F V +G LV+ G Y + + + Q + + V Q Sbjct: 121 VQNENGEERLTRNGNFTVDGEGFLVTNQGNYVLDEAGNPI----QTNGLDYVVTPEGFVQ 176 Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEM 210 +G+ V+ S V+ N + P + ++++G LE SN N+M M Sbjct: 177 TADGTFPLGIRYVEDSNQLVKEGNDLFAGESIDVP--AAATFSLQQGALEQSNVNTMQTM 234 Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 M++ + F + ++ ++S+ + + I Sbjct: 235 TDMMNAYRLFETNQRVLRAYDESLGKTVNEIG 266 >gi|260772275|ref|ZP_05881191.1| flagellar basal-body rod protein FlgF [Vibrio metschnikovii CIP 69.14] gi|260611414|gb|EEX36617.1| flagellar basal-body rod protein FlgF [Vibrio metschnikovii CIP 69.14] Length = 249 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 55/241 (22%), Positives = 99/241 (41%), Gaps = 11/241 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + ++ Q + A+N++N T GFR + + + F Sbjct: 1 MDRALFLAMSGAKQNMQAMQLRANNLANVSTTGFRADLEQARSM--QAYGEGLPSRVFSM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASG 119 + + + GS I+TG ELD ++GD W ++ + LTR G ++ +G L++ +G Sbjct: 59 TERPGHRFDQGSVITTGRELDITIQGDGWISVLDKTGNEGLTRSGNLRIDQNGLLLNGNG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172 + VL PI +P +G G IS + + + VD ++ + Sbjct: 119 -HLVLGELGAPITLPIPLNKVEIGNDGTISVRPQGAPADAMEIVDRIKLVKPDNRSLFKD 177 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 N P + V V G LE SN N++ EM +I L ++F ++ E+ Sbjct: 178 INGLFRAKDPNAEYVADATVKVLTGALEGSNVNAVGEMTNLIDLQRQFEMQVKMMSTAEE 237 Query: 233 S 233 Sbjct: 238 M 238 >gi|254508430|ref|ZP_05120550.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus 16] gi|219548640|gb|EED25645.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus 16] Length = 249 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 59/241 (24%), Positives = 100/241 (41%), Gaps = 11/241 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + ++ Q L A+N++N T GFR + + + F Sbjct: 1 MDRALYLAMSGAKQNMQALQLRANNLANVSTTGFRADLAQARSM--QAYGEGLPTRVFSM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASG 119 + + + + GS I+TG +LD +EG+ W ++ + LTRDG K+ +G LVS +G Sbjct: 59 TERPGHNFQQGSVITTGRDLDVTIEGNGWISVLDKTGKEGLTRDGNLKIDVNGLLVSGNG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172 L PI +P +G G IS + + VD +Q + Sbjct: 119 NLV-LGETGAPITLPIPLSKVEIGTDGTISVVPQGAPADAIEVVDRIKLTNTDNQSLFKD 177 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 N P E +GV + G +E SN N++ EM +I L ++F ++ E+ Sbjct: 178 VNGLFRAKDPNAAYEADAGVKLLTGAIEGSNVNAIGEMTSLIDLQRQFEMQVKMMSTAEE 237 Query: 233 S 233 Sbjct: 238 M 238 >gi|170742325|ref|YP_001770980.1| flagellar basal-body rod protein FlgG [Methylobacterium sp. 4-46] gi|168196599|gb|ACA18546.1| flagellar basal-body rod protein FlgG [Methylobacterium sp. 4-46] Length = 263 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 36/259 (13%), Positives = 84/259 (32%), Gaps = 21/259 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55 + A E + +++N++N T G++ + F +++ Sbjct: 1 MRALYAAATGMAAQELNVQVISNNIANLRTTGYKRQQAHFQDLLYQNLRRAGTATSDQGN 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 S V + G+ ST D A+ G+ F + P TRDG F Sbjct: 61 QLPAGLALGSGVKTTSTARVMSQGTLSSTEKTYDVAIRGEGLFQITMPDGRTAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDM 165 + G +VS G + + + + + + L Sbjct: 121 DLDAQGQIVSRDGYLLNPAITVPNNATAVTISASGLVQATLPGQTAPQNLGQIQLARFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ P + T +++ +LE++N N++ E+ +I + + Sbjct: 181 KVGLESIGDNLFIETQASGPAIQGNPGTEGFGSLQQSYLEEANVNAVTEISSLIAAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIR 239 + ++ ++ + + Sbjct: 241 EMNSKVVTAADQMLSTTSQ 259 >gi|83589650|ref|YP_429659.1| hypothetical protein Moth_0798 [Moorella thermoacetica ATCC 39073] gi|83572564|gb|ABC19116.1| conserved hypothetical protein [Moorella thermoacetica ATCC 39073] Length = 280 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 57/279 (20%), Positives = 114/279 (40%), Gaps = 38/279 (13%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG-------------A 47 M + G + A + ++ ++A++++N +T G++ ++V FS++V Sbjct: 2 MIGALWRGASGMRAQQVQVDSLANDIANVNTTGYKQVRVGFSDLVYRPVMEAGMPVEQPQ 61 Query: 48 IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRF 106 + V G+ + TG L+ A++G+ +FA+ + G TRDG F Sbjct: 62 APGSTVSLGTGVKVASIVKDFSQGALVQTGEPLNLAIQGEGFFAVVNGAGERFLTRDGNF 121 Query: 107 KVTDDGSLVSASGKY---PVLDMASVPIQIPQKDEIFNVGEKGEISQ----KGKVIATMG 159 DG++V+ G Y P + VP+ +P + E NV G I+ + + + + Sbjct: 122 HRDADGNVVNDGGYYLAIPAGNNQDVPLNLPPEAENINVAADGTITATVNGQVQPLGQIY 181 Query: 160 LYSVDMSQGFVRRENS----------------GISPNIPPTPLEDLSGVTVKRGFLEDSN 203 LY+V G ++ G + N T T++ G+LE +N Sbjct: 182 LYTVSNPAGLEAVGDNLYRLTPACGQLFYGAPGTAGNSETTGTPGPVLGTLRSGYLEAAN 241 Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 + M +M+ + + + I ++ M N+ Sbjct: 242 VDLAATMTRMVVAQRAYELNSRTIRVADE-MWSLANNLR 279 >gi|162147479|ref|YP_001601940.1| flagellar basal-body rod protein flgF [Gluconacetobacter diazotrophicus PAl 5] gi|161786056|emb|CAP55638.1| putative flagellar basal-body rod protein flgF [Gluconacetobacter diazotrophicus PAl 5] Length = 254 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 65/244 (26%), Positives = 117/244 (47%), Gaps = 8/244 (3%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----DIDQKIS 57 + + I L+ L + L A+N++N +T GF+ K FS+ + K+ D++ Sbjct: 9 ENTTYIALSRVDVLSRALEVTANNLANANTDGFKASKELFSDYLVQQKDVHGLPGDKEEV 68 Query: 58 FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSA 117 + Y + G+ TG DFA+ G+ +FA+ + +G+ LTR+G F DG++V Sbjct: 69 YTQDRSTYQDRLQGALRQTGNLTDFAINGEGYFAVRTTQGVRLTRNGEFNRRADGTIVDG 128 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177 SG P++D + IP +D +V G +S + +AT+ L +VD V + Sbjct: 129 SGN-PLIDRNGNNVVIPPRDHTLSVASDGTMSTETGRVATLDLVTVDNPNTLVPEGGYLL 187 Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 P P +++ +++G LE SN N++ E +M+ + + ++ LI A Sbjct: 188 RPTT---PTRNVANKEIRQGMLESSNVNAVSETTEMVEIQRDYDLTFQLIQTESTRQSNA 244 Query: 238 IRNI 241 I I Sbjct: 245 IDKI 248 >gi|291518271|emb|CBK73492.1| fagellar hook-basal body proteins [Butyrivibrio fibrisolvens 16/4] Length = 267 Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats. Identities = 54/267 (20%), Positives = 101/267 (37%), Gaps = 27/267 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV-------------VGA 47 M + ++R+ + +N++N+ T G++ + Sbjct: 1 MVKGLYTAYTGMVNEQKRMDVMTNNLANSATTGYKKEAMIAQAFDERLAIKIKDTSSWHN 60 Query: 48 IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-----PRGIILTR 102 I G+ Y + + G+F T + D AL G +FA+E I TR Sbjct: 61 APEGIGYISLGAKVGETYTNWDQGAFQITDKDSDVALAGRGFFAIEFTNKAGETSIKYTR 120 Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE-------KGEISQKGKVI 155 DG F V DG L + G Y + ++ Q + + + G I Q G+ + Sbjct: 121 DGAFVVDRDGYLRTVDGDYVLTQEGAMNSQGGEDNYVQIDPNLKYVIATDGSIRQNGEEV 180 Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIH 215 T+G+ +D + + ++ P S V++G LE SN N + EM MI Sbjct: 181 TTIGVIDIDNYDYINKYGENLY--DLIPGGNIVESEAVVQQGMLEASNVNVIDEMVSMIT 238 Query: 216 LTQKFNSITTLIDENEKSMLEAIRNIA 242 + + + + +I + ++ + I Sbjct: 239 IARAYEAGQKMIQAEDSTLEKTANQIG 265 >gi|134095095|ref|YP_001100170.1| basal-body rod protein [Herminiimonas arsenicoxydans] Length = 242 Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats. Identities = 39/241 (16%), Positives = 83/241 (34%), Gaps = 20/241 (8%) Query: 19 LSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------------QKISFVASGKEY 65 + +++N++N T GF+ + F +++ Q + V Sbjct: 1 MDVISNNLANVSTTGFKRSRAVFEDLLYQTIRQPGAASSQQTELPSGLQLGTGVRPVATE 60 Query: 66 LSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYPVL 124 G+ T + A+EGD +F + P TRDG F+ + G +V++SG Sbjct: 61 RIHTQGNLQLTSNAKNLAIEGDGFFQVLMPDGTTAYTRDGSFQTDNQGQMVTSSGFPIQP 120 Query: 125 DMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183 + V + I + L + G + R + Sbjct: 121 AITIPENATSITISRDGIVSVTVSGTTAATEIGALQLATFINPAGLMSRGENLYVETTAS 180 Query: 184 TPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 + + +K+ ++E SN N + E+ MI + + + I +++ + Sbjct: 181 GTANTNTPGSNGAGLLKQNYVETSNVNVVEELVSMIQTQRAYEINSKAITTSDQMLQRLT 240 Query: 239 R 239 + Sbjct: 241 Q 241 >gi|117612105|gb|ABK47559.1| flagellar basal-body rod protein FlgF [Shewanella sp. ANA-3] Length = 252 Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats. Identities = 47/237 (19%), Positives = 89/237 (37%), Gaps = 7/237 (2%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 I ++ L+ A+N++N +T GF++ + + + F Sbjct: 7 DKFLYISMSGAKQNMNELALRANNLANANTDGFKSDMAQARSM--QAFGEGLPTRVFAMV 64 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASGK 120 + G STG +LD A++GD WFA++ TR G G L + G Sbjct: 65 ETPSANFRSGPIKSTGRDLDVAIKGDGWFAVQAQDGSEAYTRSGSLSFDSTGLLHNDRGN 124 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENSG 176 + D + + +P + + + +G + V+ + R G Sbjct: 125 PVMGDAGPIVLPLPIEKVTISQDGIISVRPQGATTEVVEEVGRLKLVNPGNAQMMRGEDG 184 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 + + P V V+ G +E SN N + EM +I L ++F ++ E++ Sbjct: 185 LFRLVSGDPAPADPSVFVESGAVEGSNVNPVDEMVSLIDLQRQFELQVKMMKTAEEN 241 >gi|299131784|ref|ZP_07024979.1| flagellar basal-body rod protein FlgF [Afipia sp. 1NLS2] gi|298591921|gb|EFI52121.1| flagellar basal-body rod protein FlgF [Afipia sp. 1NLS2] Length = 256 Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats. Identities = 66/253 (26%), Positives = 121/253 (47%), Gaps = 12/253 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA------IKNDIDQ 54 M+ + I L+ Q+ LE++L VA+N++N T G+++ F E + + D+ Sbjct: 1 MENTTLIALSRQMTLERQLDVVANNVANVGTNGYKSDSSLFEEYLRSGAHEDNFAPGSDR 60 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSL 114 ++SFV G +T + LD A+ G +F +++P G TRDGRF++ G L Sbjct: 61 RVSFVQDRATVRDFSQGPLENTKSPLDVAISGKGFFTVQTPGGERYTRDGRFQINSQGQL 120 Query: 115 VSASGKYPVLDM-----ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169 V++SG + I D+ +G I+Q + + L S Q Sbjct: 121 VNSSGYPVLGTNGVITFQPTDHDIKITDDGTITVLEGTITQTDSLRGKLKLTSFANRQQL 180 Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 + ++ + T + + TVK GF+E SN N++ EM +M+ +T+ + +I+ L+ + Sbjct: 181 QKEGSNLFAAPANVTG-QADTVSTVKEGFIERSNVNAIAEMSRMLEITRTYQNISNLMQQ 239 Query: 230 NEKSMLEAIRNIA 242 AI+++A Sbjct: 240 QADLRKNAIQSLA 252 >gi|262396033|ref|YP_003287886.1| flagellar basal-body rod protein FlgG [Vibrio sp. Ex25] gi|262339627|gb|ACY53421.1| flagellar basal-body rod protein FlgG [Vibrio sp. Ex25] Length = 243 Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats. Identities = 44/237 (18%), Positives = 87/237 (36%), Gaps = 20/237 (8%) Query: 19 LSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------------QKISFVASGKEY 65 ++ +++N++N +TVGF+ +V F ++ +I+ Q S V Sbjct: 1 MTAISNNLANVNTVGFKRDRVVFEDLFYSIQRQPGAQVDQVNEVPSGIQLGSGVRVVGTQ 60 Query: 66 LSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASGKYPVL 124 G+ +T ELD A+ G +F +E+ I+ TR+G+F V +G +V++ G Sbjct: 61 KVFTQGNTQNTTQELDLAVMGQGFFQIENSDGQIMYTRNGQFHVNSEGLMVNSQGLPLEP 120 Query: 125 DMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183 + V + + + L G + Sbjct: 121 QIQIPDNASSFSVGVDGTVTTTTADDPTPQQLGQITLAKFINPAGLEAVGGNLFRETEAS 180 Query: 184 TPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 P ++ +K+G LE SN + EM MI + + ++ + + Sbjct: 181 GPADELIAGEDGAGLIKQGALEGSNVQVVEEMVDMITTQRAYEMNAKVVSAADDMLK 237 >gi|113884291|gb|ABI38343.1| flagellar basal-body rod protein FlgF [Shewanella sp. MR-4] gi|113888281|gb|ABI42332.1| flagellar basal-body rod protein FlgF [Shewanella sp. MR-7] Length = 252 Score = 146 bits (367), Expect = 3e-33, Method: Composition-based stats. Identities = 46/237 (19%), Positives = 89/237 (37%), Gaps = 7/237 (2%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 I ++ L+ A+N++N +T GF++ + + + F Sbjct: 7 DKFLYISMSGAKQNMNELALRANNLANANTDGFKSDMAQARSM--QAFGEGLPSRVFAMV 64 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASGK 120 + G +TG +LD A++GD WFA++ TR G G L + G Sbjct: 65 ETPSANFRAGPIKTTGRDLDVAIKGDGWFAVQAKDGSEAYTRSGSLSFDSTGLLHNDRGN 124 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENSG 176 + D + + +P + + + +G + V+ + R G Sbjct: 125 PVMGDAGPIVLPLPIEKVTISQDGIISVRPQGATTEVIEEVGRLKLVNPGNAQMMRGEDG 184 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 + + P V V+ G +E SN N + EM +I L ++F ++ E++ Sbjct: 185 LFRLVSGDPAPADPNVFVESGAVEGSNVNPVDEMVSLIDLQRQFELQVKMMKTAEEN 241 >gi|262404539|ref|ZP_06081094.1| flagellar basal-body rod protein FlgF [Vibrio sp. RC586] gi|262349571|gb|EEY98709.1| flagellar basal-body rod protein FlgF [Vibrio sp. RC586] Length = 249 Score = 146 bits (367), Expect = 3e-33, Method: Composition-based stats. Identities = 56/241 (23%), Positives = 102/241 (42%), Gaps = 11/241 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + ++ Q + A+N++N T GFR + + + F Sbjct: 1 MDRALFLAMSGAKQNMQAMQLRANNLANVSTTGFRADLAQARSM--QAYGEGLPTRVFSM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASG 119 + + + GS I+TG +LD ++G+ W ++ + LTR+G ++ + G L++ +G Sbjct: 59 TERPGNNFAQGSVITTGRDLDITVQGEGWISVLDKTGKEGLTRNGNLRIDETGLLLNGNG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172 +PVL PI +P +G G IS + + + VD +Q + Sbjct: 119 -HPVLGETGGPITLPVPLAKVEIGGDGTISVRPQGAPADAMEVVDRIKLVRPGNQALFKD 177 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 N P E + V V G LE SN N++ EM +I L ++F ++ E+ Sbjct: 178 VNGLFRATDPNMQFEADANVKVLTGALEGSNVNAIGEMTSLIDLQRQFEMQVKMMSTAEE 237 Query: 233 S 233 Sbjct: 238 M 238 >gi|89895707|ref|YP_519194.1| hypothetical protein DSY2961 [Desulfitobacterium hafniense Y51] gi|89335155|dbj|BAE84750.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 251 Score = 146 bits (367), Expect = 3e-33, Method: Composition-based stats. Identities = 55/255 (21%), Positives = 106/255 (41%), Gaps = 20/255 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKND------ 51 M G A LA + + +ADN++N T G++ + F E++ + Sbjct: 1 MIKGLYTGAAGMLAAQTQSEIIADNVANIRTPGYKGEESSNKAFPEMLMMRTSTENEIPG 60 Query: 52 ---IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA-WFALESPRGIILTRDGRFK 107 I + V + G +T D AL + + +++P G TR+G+ + Sbjct: 61 NTLIGGIGTGVVVDQITRMNVRGVLQTTDIPTDLALTAEEVFLVVDTPNGERYTRNGQLQ 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 + +G L +A G + + I + F V +G I+ +G + + L V + Sbjct: 121 LNSEGMLQTADGYPVLGEE----GPIGPLSKNFQVDAQGGITDQGVTMDRLRLVQVP-AV 175 Query: 168 GFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 G +R S + N P + V +G LE SN N +M +MI + + + + +I Sbjct: 176 GLLREGQSLYASNQPV--QDFAGNEAVLQGTLEGSNVNLPGQMVKMITVMRAYEANQKVI 233 Query: 228 DENEKSMLEAIRNIA 242 ++ ++ +A+ I Sbjct: 234 QTHDATLEKAVNEIG 248 >gi|170747256|ref|YP_001753516.1| flagellar basal-body rod protein FlgG [Methylobacterium radiotolerans JCM 2831] gi|170653778|gb|ACB22833.1| flagellar basal-body rod protein FlgG [Methylobacterium radiotolerans JCM 2831] Length = 263 Score = 146 bits (367), Expect = 3e-33, Method: Composition-based stats. Identities = 37/263 (14%), Positives = 84/263 (31%), Gaps = 21/263 (7%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + A E + +++N++N T G++ +V F +++ Sbjct: 1 MRALYSAATGMAAQELNVQVISNNIANLRTTGYKRQQVHFQDLLYQNMRRAGASTSQQNT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 S V + G+ ST + D A+ GD +F + P +RDG F Sbjct: 61 QLPAGLSLGSGVKTTSTARVMSQGTLSSTEKDYDVAIRGDGFFRVTLPDGRTAYSRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFN-VGEKGEISQKGKVIATMGLYSVDM 165 ++ G LV+ G + V + + L Sbjct: 121 DLSAQGQLVTRDGYLLDPAITVPQNATSVTISATGAVQANIPGQTAPQALGQFQLSRFVN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ +++ +LE++N N++ E+ +I + + Sbjct: 181 KVGLESIGDNLFVETAASGQAISGLPGADGFGNLQQSYLEEANVNAVTEISSLIAAQRAY 240 Query: 221 NSITTLIDENEKSMLEAIRNIAS 243 + ++ ++ + + S Sbjct: 241 EMNSKVVTAADQMLSTTTQMFRS 263 >gi|119714998|ref|YP_921963.1| hypothetical protein Noca_0751 [Nocardioides sp. JS614] gi|119535659|gb|ABL80276.1| protein of unknown function DUF1078 domain protein [Nocardioides sp. JS614] Length = 282 Score = 146 bits (367), Expect = 3e-33, Method: Composition-based stats. Identities = 44/279 (15%), Positives = 88/279 (31%), Gaps = 40/279 (14%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ + L +N++N +T+GF++ F + + + Sbjct: 1 MLRSLFAGISGLRVNQTMLDVTGNNIANANTIGFKSSSTVFQDTLSQMLTSGSAAGGGLG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 Q V + G+ +TG D + GD F + TR G F Sbjct: 61 GTNPIQVGLGVQVAATNTNLNQGANQTTGRPTDLMINGDGMFVVMRGNVATYTRAGAFSW 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG---------------- 152 + G+LVS G + V + + Sbjct: 121 DNSGTLVSPGGGRVQGYTTFDAAGVHTGGLTDIVLPEDNGATPPLALSSYELGRDGKLTA 180 Query: 153 -------KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLE 200 V+A + L + + G R + + E + S + G +E Sbjct: 181 TFEDGSKLVVAQVALANFNNPMGLARAGETSFTTTANSGVAELGVSGEGSRGALSPGSVE 240 Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E +I + F + + +I +++ + + + Sbjct: 241 MSNVDLAAEFTNLILAQRGFQASSRVITTSDQVLEDLVN 279 >gi|303328382|ref|ZP_07358820.1| flagellar basal-body rod protein FlgG [Desulfovibrio sp. 3_1_syn3] gi|302861712|gb|EFL84648.1| flagellar basal-body rod protein FlgG [Desulfovibrio sp. 3_1_syn3] Length = 264 Score = 146 bits (367), Expect = 3e-33, Method: Composition-based stats. Identities = 58/262 (22%), Positives = 113/262 (43%), Gaps = 22/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-------- 52 MQ + GL L E R++ +A+N++N +T G++ + F + + + +D Sbjct: 1 MQDALFSGLFGALTTEHRMNFIANNLANVNTHGYKRDTLAFKDTMASYAHDEIREPLMNL 60 Query: 53 --------DQKISFVASGKEYLSKEVGSFISTGTELDFALEG-DAWFALESPRGIILTRD 103 + ++ + GS TG LD A+ G +A+F + +P G LTR+ Sbjct: 61 RSAPLFPEPKNMARPRVAVSKIDFSQGSMQFTGDPLDVAINGENAFFRVTTPNGDYLTRN 120 Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 G F ++ DG++++ G L + IP +G G++ G V+ + L +V Sbjct: 121 GHFLLSGDGTVMTPQGY--PLQGTGGNVVIPAGTRNVLIGGDGQVIADGAVVNQIALINV 178 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSG---VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 D Q + ++ P E + +++GF E +N + EM MI + ++F Sbjct: 179 DDPQNLEKLGHNLFRPREKVAVAEGDAYLAGARLEQGFAEAANVQVVTEMVNMIEVQRQF 238 Query: 221 NSITTLIDENEKSMLEAIRNIA 242 + ++ ++ A I Sbjct: 239 EAYQKVMQSSDSLDRAANEKIG 260 >gi|323697471|ref|ZP_08109383.1| fagellar hook-basal body protein [Desulfovibrio sp. ND132] gi|323457403|gb|EGB13268.1| fagellar hook-basal body protein [Desulfovibrio desulfuricans ND132] Length = 258 Score = 146 bits (367), Expect = 4e-33, Method: Composition-based stats. Identities = 55/258 (21%), Positives = 100/258 (38%), Gaps = 20/258 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-------- 52 M+ S + L+ E R+S++A+N++N +T F+ K+ F + +D Sbjct: 1 MRDSTQSAIFGALSNELRMSSIANNLANVNTSAFKKDKLAFHDTFIRFAHDYLVDAKTYI 60 Query: 53 --------DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDG 104 ++ + GS TG +LDFAL G +F+++ ++ TR G Sbjct: 61 RGEDMFPEGHIMAKARLSAQQADLSQGSMERTGNQLDFALSGPGFFSVQGDTAMLYTRAG 120 Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 F DG L + G + I + V ++G I G+ + + D Sbjct: 121 NFVTDGDGMLKTVDGYPVM---VGGGPLIIPQGGRIQVDDEGNIQVNGEPAGSFDVVDFD 177 Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224 + R ++ + V+V +GF+E SN + EM MI + F T Sbjct: 178 SPELLERVGSNNYIMPTGGAQIPP-QDVSVAQGFIEKSNVEVVTEMVSMIETQRAFTMYT 236 Query: 225 TLIDENEKSMLEAIRNIA 242 +I + + I + Sbjct: 237 KMIQGDSDLDSKLINQVG 254 >gi|255262463|ref|ZP_05341805.1| flagellar basal-body rod protein FlgF [Thalassiobium sp. R2A62] gi|255104798|gb|EET47472.1| flagellar basal-body rod protein FlgF [Thalassiobium sp. R2A62] Length = 238 Score = 146 bits (367), Expect = 4e-33, Method: Composition-based stats. Identities = 62/241 (25%), Positives = 116/241 (48%), Gaps = 5/241 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M+ S L Q L + + +A+N++N T G+R + FSE V A+ D A Sbjct: 1 MENSTYATLTRQSGLMKEMRVIANNIANAATSGYRQEGITFSEYVAAVDQDHSSISMATA 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + +E + G + G D A+EG+ +F +++P G LTR G F +G LV+A G Sbjct: 61 NVRETSILQGGLTKTGG-TFDLAIEGEGYFLVQTPDGDRLTRAGAFTPNSNGDLVTADGY 119 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 PVLD P+ IP + + G IS G I +G+ + + +R++ + Sbjct: 120 -PVLDSGGAPVFIPTGADSIGIAADGTISAGGTPIGQVGIVQPNDPKELLRQDGVMFNAP 178 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 + + +GFLEDSN + + ++ +MI + + + + +D+ ++ + +++ Sbjct: 179 SG---FDAAPDARLVQGFLEDSNVDPILQISRMIEVQRAYELGQSFLDKEDERIRNVLQS 235 Query: 241 I 241 + Sbjct: 236 M 236 >gi|28897554|ref|NP_797159.1| flagellar basal body rod protein FlgF [Vibrio parahaemolyticus RIMD 2210633] gi|153839688|ref|ZP_01992355.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus AQ3810] gi|260364612|ref|ZP_05777214.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus K5030] gi|260878283|ref|ZP_05890638.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus AN-5034] gi|260898113|ref|ZP_05906609.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus Peru-466] gi|260901955|ref|ZP_05910350.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus AQ4037] gi|5361009|gb|AAD42916.1|U12817_10 polar flagellar FlgF homolog [Vibrio parahaemolyticus] gi|28805766|dbj|BAC59043.1| polar flagellar FlgF [Vibrio parahaemolyticus RIMD 2210633] gi|149746798|gb|EDM57786.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus AQ3810] gi|308086109|gb|EFO35804.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus Peru-466] gi|308090198|gb|EFO39893.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus AN-5034] gi|308106789|gb|EFO44329.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus AQ4037] gi|308115108|gb|EFO52648.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus K5030] gi|328473452|gb|EGF44300.1| flagellar basal body rod protein FlgF [Vibrio parahaemolyticus 10329] Length = 249 Score = 146 bits (367), Expect = 4e-33, Method: Composition-based stats. Identities = 59/241 (24%), Positives = 98/241 (40%), Gaps = 11/241 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + ++ Q L A+N++N T GFR + + D F Sbjct: 1 MDRALFLAMSGAKQNMQALQLRANNLANVSTTGFRADLAQARSM--QAYGDGLPSRVFSM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASG 119 + + + GS I+TG +LD +EG W ++ + LTR+G K+ +G L +ASG Sbjct: 59 TERPGHNFAQGSVITTGRDLDITVEGSGWISVLDHTGKEGLTRNGNLKIDQNGMLTNASG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172 L PI +P +G G IS + L VD Q + Sbjct: 119 HAV-LGENDAPITLPIPLSKIEIGRDGTISVLPQGAPAEELQIVDRIKLVKTDDQSLFKD 177 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 N P P E ++++ G +E SN N++ EM +I L ++F ++ E+ Sbjct: 178 TNGLFRHKTPNQPYEADGTISIQTGAIEGSNVNAVGEMTALIDLQRQFEMQVKMMSTAEE 237 Query: 233 S 233 Sbjct: 238 M 238 >gi|114567879|ref|YP_755033.1| flagellar basal-body rod protein (flgG-2) [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114338814|gb|ABI69662.1| flagellar basal-body rod protein (flgG-2) [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 246 Score = 146 bits (367), Expect = 4e-33, Method: Composition-based stats. Identities = 51/251 (20%), Positives = 108/251 (43%), Gaps = 26/251 (10%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKND----------------I 52 + R VA+N++N +T GF+ F +++ + + I Sbjct: 1 MMLQMARQDVVANNLANVNTSGFKKNTAVAKAFPDMLISRLGECKEDKQGQLKVQSPVVI 60 Query: 53 DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDG 112 + + + Y + + T + D A+ G +F +++P G TR G FK+ +G Sbjct: 61 GRLGTGASISGIYTDFDNNNLKKTDSPCDLAITGAGYFVVQTPEGQRFTRCGEFKINSEG 120 Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172 L + SG + S + F + E+G I+ G+ I + + + + Q R Sbjct: 121 ILTTNSGYPVLDSNDSPIT----IEGEFLIDEQGNINVDGENITRLKIVNFNDLQILERL 176 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 ++ ++ P +E + +G++E SN N++ EM +I + + + S+ ++ ++ Sbjct: 177 GDNLLNSPEEPYVMERPE---MLQGYIEQSNVNAVKEMVTLISVVRAYESLQKMVQAEDE 233 Query: 233 SMLEAIRNIAS 243 M +AI + S Sbjct: 234 IMGQAIDKVGS 244 >gi|296122946|ref|YP_003630724.1| hypothetical protein Plim_2702 [Planctomyces limnophilus DSM 3776] gi|296015286|gb|ADG68525.1| protein of unknown function DUF1078 domain protein [Planctomyces limnophilus DSM 3776] Length = 256 Score = 146 bits (367), Expect = 4e-33, Method: Composition-based stats. Identities = 61/253 (24%), Positives = 102/253 (40%), Gaps = 12/253 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV---------GAIKND 51 M + + R +A+N++N T F+ F + Sbjct: 1 MLYGLYLSAQGAESQAMRQGVLANNLANVGTNAFKPDIAVFRSYFPYDVAHQEPQRAPDT 60 Query: 52 IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDD 111 ID + VA GS TG D AL GD ++ L+ +LTRDG F++ D Sbjct: 61 IDLETGGVALEGTITDFSQGSLKPTGKSTDAALLGDGFYQLKMGNETLLTRDGSFELDAD 120 Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK--VIATMGLYSVDMSQGF 169 G LV A PVLD I IP + +G+ G+IS G ++ + +V + Sbjct: 121 GQLVHAGTGAPVLDPDGSEIVIPPEMIDLQIGDDGQISGVGPNGIVLPISQLAVVVPTRL 180 Query: 170 VRRENSGISPNIPPTP-LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228 + G P E V++GF+E SNA+ M ++I +++ F S ++ Sbjct: 181 TELQKRGDGMYSTKLPVAEAPPETRVRQGFVEASNADPMQGTLELIEVSRGFESNVNMMR 240 Query: 229 ENEKSMLEAIRNI 241 ++ + ++ I Sbjct: 241 MQDEMLGRLLQAI 253 >gi|262273527|ref|ZP_06051341.1| flagellar basal-body rod protein FlgG [Grimontia hollisae CIP 101886] gi|262222505|gb|EEY73816.1| flagellar basal-body rod protein FlgG [Grimontia hollisae CIP 101886] Length = 243 Score = 145 bits (366), Expect = 4e-33, Method: Composition-based stats. Identities = 40/243 (16%), Positives = 89/243 (36%), Gaps = 20/243 (8%) Query: 19 LSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------------QKISFVASGKEY 65 + +++N++N +TVGF+ +V F ++ K Q + V + Sbjct: 1 MQVISNNLANVNTVGFKQDRVVFEDLFYQTKKQPGAMADQQNEVPGGIQLGNGVRTVGTQ 60 Query: 66 LSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYPVL 124 G++ +T D A+ G +F +E P TR+G+F +G +V+A+G V Sbjct: 61 KLMRSGAYQNTQQATDLAIMGGGFFQIEMPDGSTAYTRNGQFHRNSEGMMVTAAGLPLVP 120 Query: 125 DMASVPIQI-PQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183 ++ + + V + + I + L + G + Sbjct: 121 NIEIPENALSFTVGKDGIVNITMPGEAEPQEIGQLTLVNFTNPAGLEGLGGNLFRETGAS 180 Query: 184 TPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 + + + LE SN + + EM MI + + ++ ++ + Sbjct: 181 GAPIEGVPGEEGLGYLSQYALEGSNVSVVEEMVNMITTQRAYEMNAKVVSSADQMLKFIS 240 Query: 239 RNI 241 +++ Sbjct: 241 QSM 243 >gi|220930464|ref|YP_002507373.1| hypothetical protein Ccel_3101 [Clostridium cellulolyticum H10] gi|220000792|gb|ACL77393.1| protein of unknown function DUF1078 domain protein [Clostridium cellulolyticum H10] Length = 265 Score = 145 bits (366), Expect = 4e-33, Method: Composition-based stats. Identities = 56/269 (20%), Positives = 101/269 (37%), Gaps = 34/269 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDIDQKIS 57 M + LA +++L + +NM+N +T ++ V F E++ ND + Sbjct: 1 MIRGLYTSAWSMLANQKKLDVITNNMANVNTTAYKKDTVVYQSFPEILTRRINDTQSPTN 60 Query: 58 FVASG----------KEYLSKEVGSFISTGTELDFALEGDA--------WF------ALE 93 A + Y G + TG D A++ D +F + Sbjct: 61 PSAVVGTMELSSDVGEVYTYYTQGQMVQTGDRYDLAIKDDNTGEVASPAFFTVGVINPQD 120 Query: 94 SPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK 153 + T++G F + + LV+ G + I K F V KG I Q G Sbjct: 121 NTVQEFYTKNGSFSLDANNQLVTGDGYAVL----GKKGPITLKTGDFTVDSKGNIMQNGA 176 Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQM 213 V+ T+ + S + N+ + N TV +GF E SN N + EM M Sbjct: 177 VVDTLRIAQFADSTQLRKLGNNLVMNNGGEVAE---FSGTVIQGFDEQSNVNVIDEMVDM 233 Query: 214 IHLTQKFNSITTLIDENEKSMLEAIRNIA 242 I + + + + ++ + ++ +A+ I Sbjct: 234 ITVMRAYEANQKVLQAQDGTLEKAVNEIG 262 >gi|91776310|ref|YP_546066.1| flagellar basal-body rod FlgF [Methylobacillus flagellatus KT] gi|91710297|gb|ABE50225.1| Flagellar basal-body rod FlgF [Methylobacillus flagellatus KT] Length = 246 Score = 145 bits (366), Expect = 4e-33, Method: Composition-based stats. Identities = 62/241 (25%), Positives = 101/241 (41%), Gaps = 6/241 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + ++ ST A+N++N T GFR F V + +D +FV Sbjct: 1 MDRLIYTAMTGLKHIMEQQSTTANNLANATTTGFRAQIDSFRAV--PVLSDGLPTRAFVV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G +TG ELD A+ WFA++ P TR+G FK+ ++G L + G Sbjct: 59 DATVGTNFNSGVINTTGRELDLAIRDQGWFAVQRPDGTEAYTRNGNFKLNENGVLQTQDG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176 + D + I + K N G ++ + T + V+ + R G Sbjct: 119 MMVLGDNGPITIPLEAKVAFANDGMVSAVATNVVPLFTNMIGRLKLVNPGDDNLVRGPDG 178 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + P+ + VT+ G LE SN N + EM MI ++F+ T LI E + + Sbjct: 179 LFETRNREPVPASANVTIVSGALEGSNVNVVEEMVNMISQARQFDLQTKLIQNAENNATK 238 Query: 237 A 237 A Sbjct: 239 A 239 >gi|83312595|ref|YP_422859.1| flagellar basal body rod protein [Magnetospirillum magneticum AMB-1] gi|82947436|dbj|BAE52300.1| Flagellar basal body rod protein [Magnetospirillum magneticum AMB-1] Length = 253 Score = 145 bits (366), Expect = 4e-33, Method: Composition-based stats. Identities = 62/245 (25%), Positives = 113/245 (46%), Gaps = 7/245 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND---IDQKIS 57 MQ + I L+ Q AL +++ VA+NM+N +T F+ ++ F E + ++ + K+S Sbjct: 8 MQNTSYIALSRQAALWRQMEVVANNMANANTPAFKGEEMMFREFLVPTRSSERAVGGKLS 67 Query: 58 FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSA 117 FV G T LDFAL GD +F +E+ G+ R+G F++ G LV++ Sbjct: 68 FVQDVGVLRDTREGPLTKTDNPLDFALHGDGYFQIETEAGMRYARNGHFRLDQTGMLVNS 127 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177 G +D PI + V G +S + +A + + + Q + +S Sbjct: 128 QGYAV-MDDRDQPIVFAPNETRVEVASDGTVSTENGRVARLKVVKFENDQQMRKAGDSLY 186 Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 P E + V +G +E+SN + EM +M + +++ + ++D L+A Sbjct: 187 ETTQEP---EVVQSPHVAQGMMEESNVQPVLEMTRMTQILREYQGVQKMLDAEHDRQLKA 243 Query: 238 IRNIA 242 I+ + Sbjct: 244 IQALG 248 >gi|83814111|ref|YP_446742.1| flagellar basal-body rod protein [Salinibacter ruber DSM 13855] gi|83755505|gb|ABC43618.1| flagellar basal-body rod protein [Salinibacter ruber DSM 13855] Length = 241 Score = 145 bits (366), Expect = 4e-33, Method: Composition-based stats. Identities = 45/244 (18%), Positives = 96/244 (39%), Gaps = 7/244 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M F AA + + VA+N++N T G++ +V + + D Sbjct: 1 MLPRFQNAAAAMSEMRLQQEQVANNLANASTTGYKKDRVFTEALNERLTKDGSPISD--R 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRFKVTDDGSLVSAS 118 ++ GS TG LD AL + +F + TR G F V G+L + Sbjct: 59 RLEQANDLSGGSLKETGNPLDVALGDEGFFVTQPRGGGAERYTRAGHFVVGSQGTLRTPE 118 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178 G+ + + + + + Q +I + + G I+ + + + + + + + R + + Sbjct: 119 GREVMGEGGPIQLPVEQGGDIS-ISKSGRITAGQQQVGALRVATFENPEQLERTSGASFA 177 Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 + V +G +E SN + + E+ MI + ++F + I + + A Sbjct: 178 --AGDAQPQAAENPVVLQGKVETSNVDPVTELTNMIEIQRQFEAQQKTIQTTDGVLGRAT 235 Query: 239 RNIA 242 +++ Sbjct: 236 QSLG 239 >gi|297585403|ref|YP_003701183.1| fagellar hook-basal body protein [Bacillus selenitireducens MLS10] gi|297143860|gb|ADI00618.1| fagellar hook-basal body protein [Bacillus selenitireducens MLS10] Length = 277 Score = 145 bits (366), Expect = 4e-33, Method: Composition-based stats. Identities = 43/274 (15%), Positives = 92/274 (33%), Gaps = 32/274 (11%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIK---VKFSEVVGAIKND------ 51 M A ++ ++ +++N++N +T GF+ + F ++ Sbjct: 1 MLRGLYTAGAGMISQQRNQEMLSNNIANVNTPGFKADQGSLRTFPNMLIQAMGTDHQFPG 60 Query: 52 -----IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA--------------WFAL 92 I + + V + + G + T D AL + Sbjct: 61 RRSPVIGELSTGVYMQERTPNFRQGDLMETTNSTDIALLQGETPMDEDSGLPGMLAFQIQ 120 Query: 93 ESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG 152 I TR+G F V DG L +G Y + + + + GE Sbjct: 121 NDDGDIRYTRNGDFTVDSDGFLTMGTGHYVLDTDGAPIEVGNEDFRVNQNGEIFTDDADE 180 Query: 153 KVIATMGLYSVDMSQGFVRRENSGIS----PNIPPTPLEDLSGVTVKRGFLEDSNANSMY 208 + + + + V+ + + I D +++G+LE SN ++ Sbjct: 181 VFLGQIDIMLIPDPGLLVKEGSGFLRYDGDEAIASAIGNDDVLYQLQQGYLERSNVDAGQ 240 Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 M QM+ + F + ++ ++S+ A+ +I Sbjct: 241 TMTQMMAALRNFEANQKVLQAYDQSLERAVNDIG 274 >gi|325509555|gb|ADZ21191.1| flagellar basal body rod protein FlgG [Clostridium acetobutylicum EA 2018] Length = 258 Score = 145 bits (366), Expect = 4e-33, Method: Composition-based stats. Identities = 44/260 (16%), Positives = 91/260 (35%), Gaps = 22/260 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKND------ 51 M ++ + E + + +N++NT+TVGF++ + F +V+ + Sbjct: 1 MVRGLYTAISGMVVQEAKQDVITNNLANTNTVGFKSDSLSSQSFEDVLIQNYSKRENGVP 60 Query: 52 ----IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR---GIILTRDG 104 + G+ +T + DFA++G +F + TR+G Sbjct: 61 ERTLLGTLNLGSRINDTATDFTGGNIQATDIDTDFAIQGRGFFTVRKNNGSDQNYYTRNG 120 Query: 105 RFKVTDDGSLVSASGKYPVLDM--ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162 F V DG ++ SG Y + + I + G +S G+ Sbjct: 121 HFHVNMDGYMLDDSGDYIMGTNLATNTTEPIKLGKGSVSCDPYGNVSVDGQAKYKFNFVD 180 Query: 163 VDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222 + + ++ +V+ LE SN N M M M+ + F S Sbjct: 181 FNDYTKLKKIGDNLFQ----GDNPIQNFNASVENKALEGSNVNVMKGMTDMMTTMRVFES 236 Query: 223 ITTLIDENEKSMLEAIRNIA 242 + ++++ +A+ + Sbjct: 237 NQKTVQSIDETVGKAVNEVG 256 >gi|221635451|ref|YP_002523327.1| flagellar basal-body rod protein FlgG [Thermomicrobium roseum DSM 5159] gi|221158111|gb|ACM07229.1| flagellar basal-body rod protein FlgG [Thermomicrobium roseum DSM 5159] Length = 259 Score = 145 bits (366), Expect = 4e-33, Method: Composition-based stats. Identities = 46/256 (17%), Positives = 78/256 (30%), Gaps = 17/256 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------D 51 M+ + ++ A + RL T+A N++N +T GF+ + F+ V Sbjct: 1 MEALYFPAVSGVRAQQVRLDTIAHNLANLETDGFKAARADFTAVPPQEYRVARAGEAPLG 60 Query: 52 IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF--ALESPRGIILTRDGRFKVT 109 S V +G TG D AL G F R GR + Sbjct: 61 PVPIGSGVELSATTRQFTLGPVEVTGDPFDLALAGPDTFVATELPDGTTAFRRSGRLSID 120 Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE-KGEISQKGKVIATMGLYSVDMSQG 168 G LV G + + + S + I + L QG Sbjct: 121 ATGRLVFEDGSLLQPPLVLPAGAQLDRIAPDGTVFVRAAGSGDAQPIGRLELVRFPNPQG 180 Query: 169 FVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223 + E + V G E SN + + +M Q+I + + + Sbjct: 181 LLAAGQGRWIATEAAGQPETGAPGEGNWPPVLSGVREHSNVDLVDQMTQLIMAQRAYTAN 240 Query: 224 TTLIDENEKSMLEAIR 239 + ++ + A R Sbjct: 241 LRSLQTIDELIEIATR 256 >gi|254251192|ref|ZP_04944510.1| flagellar basal-body rod protein [Burkholderia dolosa AUO158] gi|124893801|gb|EAY67681.1| flagellar basal-body rod protein [Burkholderia dolosa AUO158] Length = 252 Score = 145 bits (366), Expect = 5e-33, Method: Composition-based stats. Identities = 53/249 (21%), Positives = 90/249 (36%), Gaps = 9/249 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID----QKI 56 M + + + VA+N++N T GFR + V + Sbjct: 1 MDRLIYTAMTGASQSLDQQAIVANNLANASTTGFRAQLATYRAVPMNFGDGSTVDPATTR 60 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLV 115 ++V + G TG LD A++G W +++ P G TR G V +G LV Sbjct: 61 TYVLASTPGADFAPGPISRTGNPLDVAVQGPGWLSVQLPDGGEAYTRAGNLHVDQNGQLV 120 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT---MGLYSVDMSQGFVRR 172 +AS V + + + + I G + A L V+ + R Sbjct: 121 NASNLPVVGNGGPISVPPNAEVTIGKDGTVSALMPGDPPTAVAIVDQLKLVNPDPATLTR 180 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 N G+ P + V V LE SN N + M MI + F + LI+ ++ Sbjct: 181 GNDGLFRTADGNPADADPNVVVVPNSLEGSNVNPVNAMVSMIDNARAFQLQSKLIETADQ 240 Query: 233 SMLEAIRNI 241 + ++ + Sbjct: 241 N-EQSANQL 248 >gi|219670131|ref|YP_002460566.1| hypothetical protein Dhaf_4121 [Desulfitobacterium hafniense DCB-2] gi|219540391|gb|ACL22130.1| protein of unknown function DUF1078 domain protein [Desulfitobacterium hafniense DCB-2] Length = 251 Score = 145 bits (366), Expect = 5e-33, Method: Composition-based stats. Identities = 55/255 (21%), Positives = 106/255 (41%), Gaps = 20/255 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKND------ 51 M G A LA + + +ADN++N T G++ + F E++ N Sbjct: 1 MIKGLYTGAAGMLAAQTQSEIIADNVANIRTPGYKGEESSNKAFPEMLMMRTNTENEIPG 60 Query: 52 ---IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA-WFALESPRGIILTRDGRFK 107 I + V + G +T D AL + + +++P G TR+G+ + Sbjct: 61 NTLIGGIGTGVVVDQITRMNVQGVLQTTDIPTDLALTAEEVFLVVDTPNGERYTRNGQLQ 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 + +G L +A G + + I + F V +G I+ +G + + L + + Sbjct: 121 LNSEGMLQTADGYPVLGEE----GPIGPLSKNFQVDAQGGITDQGVTMDRLRLVQIP-AV 175 Query: 168 GFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 G +R S + N P + V +G LE SN N +M +MI + + + + +I Sbjct: 176 GLLREGQSLYASNQPV--QDFAGNEAVLQGTLEGSNVNLPGQMVKMITVMRAYEANQKVI 233 Query: 228 DENEKSMLEAIRNIA 242 ++ ++ +A+ I Sbjct: 234 QTHDATLEKAVNEIG 248 >gi|167623362|ref|YP_001673656.1| flagellar basal body rod protein FlgF [Shewanella halifaxensis HAW-EB4] gi|167353384|gb|ABZ75997.1| flagellar basal-body rod protein FlgF [Shewanella halifaxensis HAW-EB4] Length = 247 Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats. Identities = 45/238 (18%), Positives = 93/238 (39%), Gaps = 7/238 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + ++ L+ A+N++N +T GF++ + + + F Sbjct: 1 MDKLLYVAMSGAKQNMNSLAVSANNLANANTDGFKSSLAQARSM--QAFGEGLPTRVFSM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119 + + G +TG +LD A++GD W A+++ G TR G + + G L + G Sbjct: 59 TETPSANFSSGPIKTTGRDLDIAVKGDGWIAVQAENGGEAYTRSGSLRFDNSGVLRNDRG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 + D + + +P + + + G + V+ + R Sbjct: 119 TPVMGDNGPIVLPLPIEKVEISQDGIVSVRPSGATAEVIEEVGRIKLVNPGNQNLMRGED 178 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 G+ + V + G +E SN N+++EM MI L ++F ++ E++ Sbjct: 179 GLFRLMSGENAPSDPSVGLLSGAVEGSNVNAVHEMVSMIDLQRQFEMQVKMMKTAEEN 236 >gi|291613039|ref|YP_003523196.1| flagellar basal-body rod protein FlgF [Sideroxydans lithotrophicus ES-1] gi|291583151|gb|ADE10809.1| flagellar basal-body rod protein FlgF [Sideroxydans lithotrophicus ES-1] Length = 247 Score = 145 bits (365), Expect = 6e-33, Method: Composition-based stats. Identities = 56/241 (23%), Positives = 95/241 (39%), Gaps = 6/241 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + Q+ ++V+ N++N +T GFR F V + + +FV Sbjct: 1 MDRLIYTAMTGASHTLQQQASVSQNLANINTPGFRASIDAFRSV--PLVGEGLPTRTFVV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119 G STG LD A++G W A++ TR+G F+V +G L + SG Sbjct: 59 DSTAGADFTPGVIQSTGRSLDVAVDGKGWIAVQDANGNEAYTRNGSFQVLPNGILQTNSG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK---VIATMGLYSVDMSQGFVRRENSG 176 + D + I + I G + + V+ L + + + R Sbjct: 119 LNVMGDSGPITIPPDTEVSIAKDGTISTVPTTNQKNGVVVVGRLKLTNPPEDQLVRGEDA 178 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + P + + VTV G LE SN N + M MI L ++F+ L+ + + + Sbjct: 179 LFRMKDGNPADADAKVTVVSGSLESSNVNMVESMVNMISLARQFDQQMKLLQTADDNAKQ 238 Query: 237 A 237 A Sbjct: 239 A 239 >gi|288554368|ref|YP_003426303.1| flagellar basal-body rod protein [Bacillus pseudofirmus OF4] gi|288545528|gb|ADC49411.1| flagellar basal-body rod protein [Bacillus pseudofirmus OF4] Length = 272 Score = 145 bits (365), Expect = 6e-33, Method: Composition-based stats. Identities = 44/271 (16%), Positives = 99/271 (36%), Gaps = 31/271 (11%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDIDQKI- 56 M A +A +QR + +N++N +T G++ + F ++ + K Sbjct: 1 MLRGLYGAAAGMIAQQQRQEMLTNNLANANTPGYKADQASLRAFPNMLIKAMDTQGPKGA 60 Query: 57 ---------SFVASGKEYLSKEVGSFISTGTELDFAL------------EGDAWFALESP 95 + V + + G TG D AL G ++ ++S Sbjct: 61 SAPIIGELATGVYLQERMPNFRQGDINETGNSTDIALLQGVLPEGESGRPGALFYTIQSN 120 Query: 96 RGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI 155 I+ +R+G F + G L + G+Y + + + G S G VI Sbjct: 121 DEILYSRNGNFTIDGAGFLTTTEGQYVLGTNGESLQVGDENFTLDPNGTI--TSSDGAVI 178 Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTV----KRGFLEDSNANSMYEMG 211 + + + V+ + + + + ++GF+E SN ++ M Sbjct: 179 GQINVAYAEDPMLLVKEGDGLLRYTEEGELPTAIGNAEINYQLQQGFIERSNVDASQTMT 238 Query: 212 QMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 +M++ + F + ++ ++S+ +A+ + Sbjct: 239 EMMNAYRSFEANQRILQAYDQSLDKAVNEVG 269 >gi|254519398|ref|ZP_05131454.1| flagellar basal body rod protein FlgG [Clostridium sp. 7_2_43FAA] gi|226913147|gb|EEH98348.1| flagellar basal body rod protein FlgG [Clostridium sp. 7_2_43FAA] Length = 260 Score = 145 bits (365), Expect = 6e-33, Method: Composition-based stats. Identities = 52/262 (19%), Positives = 100/262 (38%), Gaps = 23/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKND------ 51 M S ++ ++LE R + + +NMSN +T GF+ + F EV+ ++ Sbjct: 1 MIRSLYTAVSGLISLENRQNNITNNMSNANTTGFKGDNLSIKSFDEVMIQNRDKVVNGNN 60 Query: 52 ----IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF----ALESPRGIILTRD 103 + + G +T + DFA+EG +F + +I TRD Sbjct: 61 VVQKLGSISLGAEIDSVDTAFTQGLIKNTDKQTDFAIEGRGFFAIQRQTNNGNEVIYTRD 120 Query: 104 GRFKVTDDGSLVSASGKYPVLDMA--SVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLY 161 G FKV +DG L++ + + I + F + + + + T+ Sbjct: 121 GNFKVGNDGYLINTNSDRVLGMNKNTGALEPIFVGGDKFILDQNNNLYIGNRATHTLATA 180 Query: 162 SVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221 + + ++ + V V +G LE SN N EM MI + F Sbjct: 181 DFNDYGSLEKIGDNYF----KGENPIYNAQVWVTQGALEGSNVNISNEMVNMITTMRNFE 236 Query: 222 SITTLIDENEKSMLEAIRNIAS 243 + ++ ++++ +A I + Sbjct: 237 TNQKIVQTIDETLGKAANEIGA 258 >gi|153953797|ref|YP_001394562.1| flagellar basal body rod protein FlgG [Clostridium kluyveri DSM 555] gi|219854413|ref|YP_002471535.1| hypothetical protein CKR_1070 [Clostridium kluyveri NBRC 12016] gi|146346678|gb|EDK33214.1| FlgG1 [Clostridium kluyveri DSM 555] gi|219568137|dbj|BAH06121.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 255 Score = 145 bits (365), Expect = 6e-33, Method: Composition-based stats. Identities = 50/258 (19%), Positives = 90/258 (34%), Gaps = 21/258 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGA---------- 47 M SF ++ + E + + +N++N +TVGF+ +K F+EV+ Sbjct: 1 MIRSFYTAVSGMIVQEAKQDVITNNLANVNTVGFKQDDLKSTPFNEVLIQNYDKVVNGKN 60 Query: 48 IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 ++N I G+ ST DFA++G +F + TRDG F Sbjct: 61 VRNVIGSMTLGSKIDSVDTGFTQGTIESTDISTDFAIDGRGFFTVRREDGNEFYTRDGHF 120 Query: 107 KVTDDGSLVSASGKYPVL--DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 V G LV SG + + I + G IS G + + Sbjct: 121 HVNTQGILVDDSGNTVIGRDNQTGALGAINVGNGDITSDAYGNISIDGNERYKIYTVDFN 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224 + ++ V++ LE SN N + M +I + F + Sbjct: 181 DYNDLTKVGDNLY-----TGENAAEINTVVRQKSLEKSNINLVNTMSDLITTMRTFETDQ 235 Query: 225 TLIDENEKSMLEAIRNIA 242 ++ + ++ + I Sbjct: 236 KVVQSIDGTLDKLINEAG 253 >gi|206558969|ref|YP_002229729.1| flagellar basal body rod protein FlgF [Burkholderia cenocepacia J2315] gi|198035006|emb|CAR50878.1| flagellar basal-body rod protein FlgF (putative proximal rod protein) [Burkholderia cenocepacia J2315] Length = 252 Score = 145 bits (365), Expect = 6e-33, Method: Composition-based stats. Identities = 51/249 (20%), Positives = 89/249 (35%), Gaps = 9/249 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----DIDQKI 56 M + + + VA+N++N T GFR + V + D Sbjct: 1 MDRLIYTAMTGASQSLDQQAVVANNLANASTTGFRAQLATYRAVPMNFGDGSKIDPTTTR 60 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLV 115 ++V S G TG LD A++G W ++++ TR G V ++G LV Sbjct: 61 TYVLSSTPGADYAPGPITRTGNPLDVAVQGPGWLSVQTADGSEAYTRAGNLHVDENGQLV 120 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT---MGLYSVDMSQGFVRR 172 +AS + + + + + I G + A + V+ + R Sbjct: 121 NASNLPVIGNGGPISVPPNAEVTIGKDGTVSALMPGDPPTAVAIVDQMKLVNPDPATLTR 180 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 N G+ P + V V LE SN N + M MI + F + LI ++ Sbjct: 181 GNDGLFRTADGNPADVDPNVVVTPNSLEGSNVNPVTAMVAMIDNARAFQLQSKLIQTADQ 240 Query: 233 SMLEAIRNI 241 + + + Sbjct: 241 N-EQTANQL 248 >gi|149911701|ref|ZP_01900309.1| flagellar basal-body rod protein FlgF [Moritella sp. PE36] gi|149805231|gb|EDM65248.1| flagellar basal-body rod protein FlgF [Moritella sp. PE36] Length = 247 Score = 145 bits (364), Expect = 6e-33, Method: Composition-based stats. Identities = 49/238 (20%), Positives = 95/238 (39%), Gaps = 7/238 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M I ++ L+ A+N++N +T GF+ + + + F Sbjct: 1 MDNMLYISMSGAKENMNALAVRANNLANVNTHGFKADFEQARSM--QAFGEGLPTRVFAI 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASG 119 + G+ TG LD AL+GD W ++ + TR G ++ G L+++SG Sbjct: 59 TESPGQDFTGGALQQTGNALDVALQGDGWLSVLDDKNNEGYTRSGSLHMSATGELLTSSG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS----VDMSQGFVRRENS 175 + + + + I P + + + EI +G + V+ + + Sbjct: 119 RPVLGENGPIIIPTPIEQIQIHADGRIEIRPQGAPANALEQVDQLKLVNPDVRNLVKGYD 178 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 G+ TP V V G LE SN +++ E+ MI+L ++F ++ E++ Sbjct: 179 GLFRQADGTPAVVDPNVQVAGGVLETSNVSAVGELTGMINLQRQFEMQIKMMKTAEEN 236 >gi|229918635|ref|YP_002887281.1| hypothetical protein EAT1b_2922 [Exiguobacterium sp. AT1b] gi|229470064|gb|ACQ71836.1| protein of unknown function DUF1078 domain protein [Exiguobacterium sp. AT1b] Length = 303 Score = 145 bits (364), Expect = 6e-33, Method: Composition-based stats. Identities = 45/300 (15%), Positives = 90/300 (30%), Gaps = 61/300 (20%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + G++ + +L V +N++N +T G++ +V F ++V Sbjct: 1 MLRAMYSGISGLKNFQSKLDVVGNNIANVNTFGYKKGRVTFKDLVSQQVGSASAGNATTG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 + G+ +TG LD + G+ ++A I TR G F Sbjct: 61 GVNPKEVGLGGTMATVDNVYNQGAMQNTGRALDVGISGEGFYATMVNGQIQYTRAGNFYT 120 Query: 109 TDDGSLVSASGKYPVLDMAS--VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---- 162 + G+LV+ G Y + + P + G + A G + Sbjct: 121 DNQGNLVTGDGTYLIGSQTNTLPPSGVAGVAATPTAANMGANLDAPYLAADAGTQTVKYG 180 Query: 163 --------------------------------------VDMSQGFVRRENSGISPNIPPT 184 + G + + + Sbjct: 181 RIKIPTDAKSLSIGKDGQVSFVAANGELRIAGYIVTSNFSNNAGLSKVGANNFVQSQNSG 240 Query: 185 PLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + + G LE SN + E +MI + F + T +I +++ + E + Sbjct: 241 APQFGVPGAGGRGELVSGALEMSNVDLSEEFTEMIVAQRGFQANTRIITTSDEILQELVN 300 >gi|221215572|ref|ZP_03588535.1| flagellar basal-body rod protein FlgF [Burkholderia multivorans CGD1] gi|221164560|gb|EED97043.1| flagellar basal-body rod protein FlgF [Burkholderia multivorans CGD1] Length = 252 Score = 145 bits (364), Expect = 7e-33, Method: Composition-based stats. Identities = 52/249 (20%), Positives = 90/249 (36%), Gaps = 9/249 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----DIDQKI 56 M + + + VA+N++N T GFR + V + D + Sbjct: 1 MDRLIYTAMTGASQSLDQQAIVANNLANASTTGFRAQLATYRAVPMNFGDGSAIDPNTTR 60 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLV 115 ++V + G TG LD A++G W +++ P TR G V +G LV Sbjct: 61 TYVLASTPGADFAPGPITRTGNPLDVAVQGPGWLSVQLPDGSEAYTRAGNLHVDQNGQLV 120 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT---MGLYSVDMSQGFVRR 172 +AS V + + + + I G + A + V+ + R Sbjct: 121 NASNLPVVGNGGPISVPPNAEVTIGKDGTVSALMPGDPPTAVAIVDQMKLVNPDPATLVR 180 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 N G+ P + V V LE SN N + M MI + F + LI ++ Sbjct: 181 GNDGLFRTTDGNPADADPNVAVVPNSLEGSNVNPVTAMVAMIDNARAFQLQSKLIQTADQ 240 Query: 233 SMLEAIRNI 241 + ++ + Sbjct: 241 N-EQSANQL 248 >gi|161526185|ref|YP_001581197.1| flagellar basal body rod protein FlgF [Burkholderia multivorans ATCC 17616] gi|189349099|ref|YP_001944727.1| flagellar basal body rod protein FlgF [Burkholderia multivorans ATCC 17616] gi|160343614|gb|ABX16700.1| flagellar basal-body rod protein FlgF [Burkholderia multivorans ATCC 17616] gi|189333121|dbj|BAG42191.1| flagellar basal-body rod protein [Burkholderia multivorans ATCC 17616] Length = 252 Score = 145 bits (364), Expect = 7e-33, Method: Composition-based stats. Identities = 52/249 (20%), Positives = 90/249 (36%), Gaps = 9/249 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----DIDQKI 56 M + + + VA+N++N T GFR + V + D + Sbjct: 1 MDRLIYTAMTGASQSLDQQAIVANNLANASTTGFRAQLATYRAVPMNFGDGSAVDPNTTR 60 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLV 115 ++V + G TG LD A++G W +++ P TR G V +G LV Sbjct: 61 TYVLASTPGADFAPGPITRTGNPLDVAVQGPGWLSVQLPDGSEAYTRAGNLHVDQNGQLV 120 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT---MGLYSVDMSQGFVRR 172 +AS V + + + + I G + A + V+ + R Sbjct: 121 NASNLPVVGNGGPISVPPNAEVTIGKDGTVSALMPGDPPTAVAIVDQMKLVNPDPATLVR 180 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 N G+ P + V V LE SN N + M MI + F + LI ++ Sbjct: 181 GNDGLFRTTDGNPADADPNVAVVPNSLEGSNVNPVTAMVAMIDNARAFQLQSKLIQTADQ 240 Query: 233 SMLEAIRNI 241 + ++ + Sbjct: 241 N-EQSANQL 248 >gi|153834440|ref|ZP_01987107.1| flagellar basal-body rod protein FlgF [Vibrio harveyi HY01] gi|156973588|ref|YP_001444495.1| flagellar basal body rod protein FlgF [Vibrio harveyi ATCC BAA-1116] gi|269961600|ref|ZP_06175962.1| flagellar basal-body rod protein FlgF [Vibrio harveyi 1DA3] gi|148869136|gb|EDL68168.1| flagellar basal-body rod protein FlgF [Vibrio harveyi HY01] gi|156525182|gb|ABU70268.1| hypothetical protein VIBHAR_01291 [Vibrio harveyi ATCC BAA-1116] gi|269833641|gb|EEZ87738.1| flagellar basal-body rod protein FlgF [Vibrio harveyi 1DA3] Length = 249 Score = 145 bits (364), Expect = 7e-33, Method: Composition-based stats. Identities = 60/241 (24%), Positives = 100/241 (41%), Gaps = 11/241 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + ++ Q L A+N++N T GFR + + + F Sbjct: 1 MDRALFLAMSGAKQNMQALQLRANNLANVSTTGFRADLAQARSM--QAYGEGLPSRVFSM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119 + + + GS I+TG +LD +EG W + ++ LTR+G KV +G L +ASG Sbjct: 59 TERPGHNFAQGSVITTGRDLDITVEGSGWISVMDQTGKEGLTRNGNLKVDQNGLLTNASG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172 + VL PI +P +G G IS + L VD Q + Sbjct: 119 -HVVLGENDAPITLPIPVSKIEIGRDGTISVLPQGAPAEELEVVDRIKLVRTDDQNLFKD 177 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 N P P E ++++ G +E SN N++ EM +I L ++F ++ E+ Sbjct: 178 TNGLFRHKTPNQPYEADGSISIQTGAIEGSNVNAVGEMTALIDLQRQFEMQVKMMSTAEE 237 Query: 233 S 233 Sbjct: 238 M 238 >gi|134095096|ref|YP_001100171.1| basal-body rod protein [Herminiimonas arsenicoxydans] gi|133738999|emb|CAL62047.1| Flagellar basal-body rod protein FlgF (Putative proximal rod protein) [Herminiimonas arsenicoxydans] Length = 246 Score = 145 bits (364), Expect = 7e-33, Method: Composition-based stats. Identities = 60/246 (24%), Positives = 100/246 (40%), Gaps = 6/246 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + ++ +TV N+SN T GFR F V + N +FV Sbjct: 1 MDRLIYTAMTGAKQILEQQATVTHNLSNVSTTGFRAQLDTFRAV--PVVNAALPTRTFVV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 G F TG +LD A++G W A+E TR G KV ++G L + SG Sbjct: 59 DSTVGNDFRAGPFQQTGRDLDVAIQGKGWLAVERADGTEGYTRSGSLKVNENGVLQTQSG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEI---SQKGKVIATMGLYSVDMSQGFVRRENSG 176 + D + I + I G + S+ G+ I L V+ + ++R + G Sbjct: 119 LNVLGDGGPISIPPDVQITIAKDGTISSVESGSKPGQTIQVGRLKLVNPDEANLKRADDG 178 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + + + V++ G +E SN N + M MI L ++F ++ E + + Sbjct: 179 LFVTKDGEDVAADADVSLVSGAVEGSNVNVVDAMVNMITLARQFELHMNMLKHAESNAAK 238 Query: 237 AIRNIA 242 A +A Sbjct: 239 ATEFLA 244 >gi|261856359|ref|YP_003263642.1| flagellar basal-body rod protein FlgF [Halothiobacillus neapolitanus c2] gi|261836828|gb|ACX96595.1| flagellar basal-body rod protein FlgF [Halothiobacillus neapolitanus c2] Length = 247 Score = 145 bits (364), Expect = 7e-33, Method: Composition-based stats. Identities = 54/236 (22%), Positives = 93/236 (39%), Gaps = 7/236 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M I ++ ST A+N++N T GF+ F + + + Sbjct: 1 MDRLAYIAMSGAKQTLLAQSTNANNLANVSTQGFKADLDAFQSM--PVYGPGYASRVYAQ 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G ++TG LD AL+G + A+++P TR G ++ +G L + +G Sbjct: 59 DERSGTDFAQGPLMTTGRSLDVALKGQGFMAVQAPDGSTAYTRRGDLHISPNGQLQTGTG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176 + + + I K +I G I G V A + V+ +++ G Sbjct: 119 APVLGNQGPIAIPPASKIDILGDGTISIIPLGGDVNAPAQIDRIRLVNPPLADLQKRGDG 178 Query: 177 ISPNIPPTP-LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 + P TP + + V V G LE SN N + M +MI + F T +I + Sbjct: 179 LFALKPNTPVPQPDAAVQVASGVLEGSNVNPVDSMVKMIEYGRLFEMQTKMIKTAD 234 >gi|163744348|ref|ZP_02151708.1| hypothetical protein OIHEL45_02155 [Oceanibulbus indolifex HEL-45] gi|161381166|gb|EDQ05575.1| hypothetical protein OIHEL45_02155 [Oceanibulbus indolifex HEL-45] Length = 247 Score = 145 bits (364), Expect = 8e-33, Method: Composition-based stats. Identities = 58/244 (23%), Positives = 108/244 (44%), Gaps = 2/244 (0%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M S +I ++ +L+++L A+N++N T G++ V F ++ D + +FV+ Sbjct: 1 MTESSHISMSLATSLQRQLDITANNIANASTAGYKGEHVVFEALLQNNTAMGDDQAAFVS 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 Y+ G+ TG LD AL G+ WF+ E+ RDG F + G+L SG Sbjct: 61 DTGSYIDTRPGALSQTGNPLDVALHGEGWFSYETADGQQAYGRDGSFTLDTQGNLTLLSG 120 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEIS-QKGKVIATMGLYSVDMSQGFVRRENSGIS 178 + + + N+ E G IS + + +G++ V Q + R + Sbjct: 121 AKVLDAGGAPIQLPTEGLGDINISEDGTISGSETGPLGRIGVFDVPEIQSYKRLGAGMLV 180 Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 V V++G LE SN N + EM ++I + + + T++ + +++ Sbjct: 181 APEGAAKPAVAESVQVRQGTLELSNVNPVREMTRLIDVQRAYERTNTMMGNADDLRRDSL 240 Query: 239 RNIA 242 + IA Sbjct: 241 KRIA 244 >gi|124268253|ref|YP_001022257.1| flagellar basal body and hook protein [Methylibium petroleiphilum PM1] gi|124261028|gb|ABM96022.1| flagellar basal body and hook protein [Methylibium petroleiphilum PM1] Length = 242 Score = 145 bits (364), Expect = 8e-33, Method: Composition-based stats. Identities = 54/242 (22%), Positives = 90/242 (37%), Gaps = 6/242 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + ++ A QR T+A+N++N T GFR F V ++ D + Sbjct: 1 MDRMIYLSMSGAKATMQRQETLANNLANASTTGFRAELQAFRAV--PVRGDGASTRVYSL 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119 G +TG LD A++G+AW A++ TR G +V +G+L ++ G Sbjct: 59 ETTTGYDPTPGPMAATGRALDVAMQGNAWLAVQGLDGTEAYTRMGSLQVDAEGTLKTSGG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 + D + + +I G G V + L V R ++ Sbjct: 119 LTVLGDGGPIALPANSSPQIAADGTVSVKQANGGVTSVGRLKLVTPEAALQRGDDGLFRA 178 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 P V G LE SN N + M MI ++F S ++ + +A Sbjct: 179 ADGDLP--VDPNARVAEGTLEGSNVNPIENMVAMIAAARQFESQMKMLQTA-EGDEKAAS 235 Query: 240 NI 241 + Sbjct: 236 QL 237 >gi|221199740|ref|ZP_03572783.1| flagellar basal-body rod protein FlgF [Burkholderia multivorans CGD2M] gi|221208655|ref|ZP_03581655.1| flagellar basal-body rod protein FlgF [Burkholderia multivorans CGD2] gi|221171466|gb|EEE03913.1| flagellar basal-body rod protein FlgF [Burkholderia multivorans CGD2] gi|221179979|gb|EEE12383.1| flagellar basal-body rod protein FlgF [Burkholderia multivorans CGD2M] Length = 252 Score = 145 bits (364), Expect = 8e-33, Method: Composition-based stats. Identities = 52/249 (20%), Positives = 90/249 (36%), Gaps = 9/249 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----DIDQKI 56 M + + + VA+N++N T GFR + V + D + Sbjct: 1 MDRLIYTAMTGASQSLDQQAIVANNLANASTTGFRAQLATYRAVPMNFGDGSAIDPNTTR 60 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLV 115 ++V + G TG LD A++G W +++ P TR G V +G LV Sbjct: 61 TYVLASTPGADFAPGPITRTGNPLDVAVQGPGWLSVQLPDGSEAYTRAGNLHVDQNGQLV 120 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT---MGLYSVDMSQGFVRR 172 +AS V + + + + I G + A + V+ + R Sbjct: 121 NASNLPVVGNGGPISVPPNAEVTIGKDGTVSALMPGDPPTAVAIVDQMKLVNPDPAALVR 180 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 N G+ P + V V LE SN N + M MI + F + LI ++ Sbjct: 181 GNDGLFRTTDGNPADADPNVAVVPNSLEGSNVNPVTAMVAMIDNARAFQLQSKLIQTADQ 240 Query: 233 SMLEAIRNI 241 + ++ + Sbjct: 241 N-EQSANQL 248 >gi|209884527|ref|YP_002288384.1| flagellar basal body rod protein [Oligotropha carboxidovorans OM5] gi|209872723|gb|ACI92519.1| flagellar basal body rod protein [Oligotropha carboxidovorans OM5] Length = 255 Score = 144 bits (363), Expect = 8e-33, Method: Composition-based stats. Identities = 63/252 (25%), Positives = 118/252 (46%), Gaps = 11/252 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN-----DIDQK 55 M+ + + L+ Q+ LE++LS VA+N++N T G++ F E + + + D++ Sbjct: 1 MENTSLVALSRQMTLERQLSVVANNVANIGTNGYKADSSLFEEYLRSGAHEDNFVGFDRR 60 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115 +SFV G +T LD A+ G +F +++P G +RDGR ++ G LV Sbjct: 61 VSFVHDRATLRDFGQGPLENTKAPLDVAISGKGFFTVQTPNGERYSRDGRLQINAQGQLV 120 Query: 116 SASGKYPVLDM-----ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170 ++SG + + D +G I+Q + + L S Q Sbjct: 121 NSSGYPVLGTNGVITFQPTDHDVKISDNGTITVLEGTITQTDSIRGRLRLTSFASPQQLQ 180 Query: 171 RRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + ++ +D + TVK+GF+E SN N++ EM +M+ +T+ + +I+ L+ + Sbjct: 181 KEGSNL-FTAPANVTGQDDTVSTVKQGFIERSNVNAIAEMSRMLEITRTYQNISNLMQQQ 239 Query: 231 EKSMLEAIRNIA 242 AI+ +A Sbjct: 240 ADLRKNAIQTLA 251 >gi|326202441|ref|ZP_08192310.1| fagellar hook-basal body protein [Clostridium papyrosolvens DSM 2782] gi|325987559|gb|EGD48386.1| fagellar hook-basal body protein [Clostridium papyrosolvens DSM 2782] Length = 265 Score = 144 bits (363), Expect = 8e-33, Method: Composition-based stats. Identities = 53/269 (19%), Positives = 101/269 (37%), Gaps = 34/269 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDIDQKIS 57 M + LA +++L + +NM+N +T ++ V F E++ ND + Sbjct: 1 MIRGLYTSAWSMLANQKKLDVITNNMANVNTTAYKKDTVVYQSFPEILTRRINDTQSPTN 60 Query: 58 FVASG----------KEYLSKEVGSFISTGTELDFALEGDA--------WF------ALE 93 A + Y G + TG D A++ D +F + Sbjct: 61 PSAVVGSMELSSDVGEVYTYYTPGQIVQTGDRYDLAIKDDNTGDKASPAFFTVGVTNPQD 120 Query: 94 SPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK 153 + T++G F + + LV+ G + I K F V KG I Q G Sbjct: 121 NTMQEFYTKNGSFTLNSNNQLVTGDGYAVL----GKKGPITLKQGDFTVDSKGNIMQNGA 176 Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQM 213 V+ T+ + S + N+ + N +V +G+ E SN N + EM M Sbjct: 177 VVDTLRIAQFADSTQLRKFGNNLVQNNGGEVAE---FTGSVIQGYDELSNVNIIDEMVDM 233 Query: 214 IHLTQKFNSITTLIDENEKSMLEAIRNIA 242 I + + + + ++ + ++ +A+ + Sbjct: 234 ITVMRAYEANQKVLQAQDGTLDKAVNEVG 262 >gi|149927799|ref|ZP_01916050.1| hypothetical protein LMED105_11310 [Limnobacter sp. MED105] gi|149823421|gb|EDM82652.1| hypothetical protein LMED105_11310 [Limnobacter sp. MED105] Length = 245 Score = 144 bits (363), Expect = 9e-33, Method: Composition-based stats. Identities = 57/244 (23%), Positives = 102/244 (41%), Gaps = 6/244 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + A R +A+N++N +T GFR + F + + SF Sbjct: 1 MDKLIFLAAQAAKGTMSRQENIANNLANVNTPGFRQQLMAFQS--APVTGEGSGSRSFAV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 G STG E+D A++G+ WFA+ + TR+G F++ G+LV+ G Sbjct: 59 ETSIGFDTTPGQIQSTGREMDVAIQGEGWFAVNDAKGNEAYTRNGSFQLDGQGNLVTQEG 118 Query: 120 KYPVLDMASVPIQIPQK--DEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177 + + + + E IS V+ L V++ +G + R + G+ Sbjct: 119 YSVIGSNGPINVPPDHRLSFEGDGSVSAIPISGDTNVVQLGRLKLVNIPEGDINRGDDGL 178 Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 P E V V GF+E SN N++ M QMI +++ + +I +++ +A Sbjct: 179 FRAANGDPAEADLNVRVAGGFIESSNVNAVDMMVQMITAARQYETQMKMISTAKEN-GQA 237 Query: 238 IRNI 241 ++ Sbjct: 238 ANSL 241 >gi|323527712|ref|YP_004229865.1| flagellar basal-body rod protein FlgF [Burkholderia sp. CCGE1001] gi|323384714|gb|ADX56805.1| flagellar basal-body rod protein FlgF [Burkholderia sp. CCGE1001] Length = 252 Score = 144 bits (363), Expect = 9e-33, Method: Composition-based stats. Identities = 54/249 (21%), Positives = 98/249 (39%), Gaps = 9/249 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI----DQKI 56 M ++ ++ + VA+N++N T GFR F V + + + Sbjct: 1 MDRLIYTAMSGSTQALEQQAIVANNLANASTTGFRAQLATFRAVPMSFGDGSSINDNTTR 60 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLV 115 +FV S G TG LD A+EG W ++++ G TR G + +G LV Sbjct: 61 TFVLSSTPGADYTPGPIQQTGNPLDVAIEGPGWLSVQTADGGEAYTRAGNLHIDQNGQLV 120 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRR 172 +A+ + + + V + + I G ++ A + + V+ + R Sbjct: 121 NATNQVVLGNGGPVSVPPGAQITIGRDGTVTALTPGDPPTAVVTIDQLKLVNPDPQTLTR 180 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 + G+ P + V V LE SN N + M MI ++F T L++ +K Sbjct: 181 GDDGLFRTADGNPADADPTVAVAPASLEGSNVNPVSAMVSMITNARQFQMQTKLLESADK 240 Query: 233 SMLEAIRNI 241 + +A + Sbjct: 241 N-DQAANQL 248 >gi|205375362|ref|ZP_03228152.1| flagellar basal-body rod protein [Bacillus coahuilensis m4-4] Length = 270 Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats. Identities = 55/271 (20%), Positives = 108/271 (39%), Gaps = 32/271 (11%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDID---- 53 M + +A +++ T+A+N++N +T GF+ + F E++ Sbjct: 1 MLRGLYTAASGMIAQQRKTETLANNLANANTPGFKADQTSVRSFPEMLLMSVGQGTLPNQ 60 Query: 54 -------------QKISFVASGKEYLSKEVGSFISTGTELDFALE-------GDAWFALE 93 + V + G TG + D L G + ++ Sbjct: 61 QRSTIPQLNSLQTSISTGVYVQELTPLLSQGDLFETGMKTDIGLYDINVPQGGTVLYTVQ 120 Query: 94 SPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK 153 G+ TR+G + +GSLV+++G Y + + I +E F V ++GEI Q G+ Sbjct: 121 GENGVSYTRNGNLTLDGNGSLVTSNGYYVLDTNGN---TITLGNEDFTVNDQGEIIQNGQ 177 Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVK--RGFLEDSNANSMYEMG 211 +A +G+ + + + ++ G+ + +GFLE+SN N M Sbjct: 178 GVAKLGVAYAADASTLRKIGTDLYESDGQLQNAYNVEGLQFQTVQGFLENSNVNESQTMT 237 Query: 212 QMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 M+ + F + L+ +KS+ +A+ I Sbjct: 238 DMMTAYRSFEANQKLLQAYDKSLDKAVNEIG 268 >gi|157961172|ref|YP_001501206.1| flagellar basal body rod protein FlgF [Shewanella pealeana ATCC 700345] gi|157846172|gb|ABV86671.1| flagellar basal-body rod protein FlgF [Shewanella pealeana ATCC 700345] Length = 247 Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats. Identities = 45/238 (18%), Positives = 94/238 (39%), Gaps = 7/238 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + ++ L+ A+N++N +T GF++ + + + F Sbjct: 1 MDKLLYVAMSGAKQNMNSLAVSANNLANANTDGFKSSLAQARSM--QAFGEGLPTRVFSM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119 + + G +TG +LD A++GD W A+++ G TR G + + G L + G Sbjct: 59 TETPSANFASGPIKTTGRDLDIAVKGDGWIAVQAENGGEAYTRSGSLRFDNSGVLRNDKG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS----VDMSQGFVRRENS 175 + D + + +P + + + G + + V+ + R Sbjct: 119 TAVMGDNGPIVLPLPIEKVEISQDGIVSVRPSGATAEVIEEVARIKLVNPGNQNLMRGED 178 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 G+ + V + G +E SN N+++EM MI L ++F ++ E++ Sbjct: 179 GLFRLMSGENAPADPSVGLLSGAVEGSNVNAVHEMVSMIDLQRQFEMQVKMMKTAEEN 236 >gi|94312670|ref|YP_585879.1| flagellar basal body proximal rod protein [Cupriavidus metallidurans CH34] gi|93356522|gb|ABF10610.1| flagellar basal body proximal rod protein [Cupriavidus metallidurans CH34] Length = 247 Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats. Identities = 56/245 (22%), Positives = 96/245 (39%), Gaps = 13/245 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M L+ + + + V++N++N T F+ + V + Q +F Sbjct: 1 MDRMIYTALSGAKQILDQQAAVSNNLANASTTAFKAQVNMYRAV--PVVGQETQTRAFTL 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + G TG LD AL+G+ W A++ P TR G +V+ DG L ++ G Sbjct: 59 ASTPGADMKAGPLSYTGRNLDVALQGNGWLAVQMPDGSEAYTRAGSLQVSPDGQLQTSLG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV-------DMSQGFVRR 172 + D + I ++G G ++ +G A GL V +G R Sbjct: 119 LPVMGDGGPIGI---PPGSTVSIGTDGTVTARGPGEAANGLAQVGKLRVVTPPPEGLARG 175 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 ++ PL+ V V G LE SN N + M +MI ++F +I + Sbjct: 176 DDGYFRLRPGVDPLQQDPNVRVISGALEGSNVNPVESMVEMIANARRFEMQMKMITGADS 235 Query: 233 SMLEA 237 + A Sbjct: 236 NDQRA 240 >gi|28211309|ref|NP_782253.1| flagellar basal body rod protein FlgG [Clostridium tetani E88] gi|28203749|gb|AAO36190.1| flagellar basal-body rod protein flgG [Clostridium tetani E88] Length = 285 Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats. Identities = 51/286 (17%), Positives = 103/286 (36%), Gaps = 47/286 (16%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ------ 54 M G +A A +++L +++N++N +T G++ V F +++ + Sbjct: 1 MLRVLWSGRSAMYAQQEKLDAISNNIANVNTEGYKRQDVSFQDLMNETLDRRGYPVNEEG 60 Query: 55 -----KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109 + V +G G+ +TG+ DFA++G+ +F + S R G F + Sbjct: 61 NRNLIHGTGVKTGPWIRDNTQGTLNNTGSSTDFAIDGNGYFKVFSNDKEYYIRAGNFNLD 120 Query: 110 DDGSLVSASGKYPVLD---------------------------------MASVPIQIPQK 136 + G+LV +G +D P+ Sbjct: 121 NKGNLVDKNGNILEIDRNIENIIDEDEEYDFDDDYYDDYEDYDDDFGEVQRRTPLIKDNF 180 Query: 137 DEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKR 196 + + ++K ++I + +Y F+ ++ P P S V + Sbjct: 181 YVEKDGRVYLKDAKKPRLIGKINVYDAVGENAFISVSDNLYKPVQGVNPEAVNSD--VLQ 238 Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G++E SN EM MI + F + + ++ M I N+ Sbjct: 239 GYVERSNVRMEKEMSDMIVSQRAFEFSSRAVKAADE-MWGMINNLR 283 >gi|77359723|ref|YP_339298.1| flagellar biosynthesis; cell-proximal portion of basal-body rod [Pseudoalteromonas haloplanktis TAC125] gi|76874634|emb|CAI85855.1| flagellar biosynthesis; cell-proximal portion of basal-body rod [Pseudoalteromonas haloplanktis TAC125] Length = 247 Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats. Identities = 49/241 (20%), Positives = 96/241 (39%), Gaps = 7/241 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M I + L+ A+N++N +T GF+ + + + F Sbjct: 1 MDKMVYIAASGAKQSLMGLALKANNLANANTTGFKADFAQARSM--QAFGEGLPSRVFSM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + G TG ELD A+ +AW +++ T+ G +T +G LV++ G Sbjct: 59 EERPGSNMTSGGIQQTGRELDIAMSDNAWLSVQDASGNEAYTKVGTLNITAEGMLVTSGG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS----VDMSQGFVRRENS 175 + + + + + +P + F+ ++ +G + V+ + + + N Sbjct: 119 RQVIGEGGPIILPVPIEKIEFSKDGAIQVRPQGAPANFLEEVDRLKVVEANNSTLEKGND 178 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 G+ P +E + V V G LE SN N ++EM MI ++F L+ E+ Sbjct: 179 GLFRPKPNQTVETSANVQVISGALEMSNVNPVHEMVDMISHQRQFELQVKLMKTAEEIDQ 238 Query: 236 E 236 Sbjct: 239 S 239 >gi|300854230|ref|YP_003779214.1| flagellar basal-body rod protein [Clostridium ljungdahlii DSM 13528] gi|300434345|gb|ADK14112.1| flagellar basal-body rod protein [Clostridium ljungdahlii DSM 13528] Length = 255 Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats. Identities = 47/256 (18%), Positives = 96/256 (37%), Gaps = 21/256 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGA---------- 47 M SF ++ + E + + +N++N +TVGF+ + F++++ Sbjct: 1 MIRSFYSAVSGMITQEAKQDVITNNLANANTVGFKQDDLRVKSFNDMLLQNYDKTEGNRS 60 Query: 48 IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRF 106 ++N I GS STG DFA++G +F + TRDG F Sbjct: 61 VRNIIGSISLGSGIDSVKTGFTQGSIDSTGVSTDFAIDGRGFFTVRGQDGKEYYTRDGHF 120 Query: 107 KVTDDGSLVSASGKYP--VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 V +G LV+ +G ++ + + G I+ G + + Sbjct: 121 HVNTNGVLVNDAGDSVLARNTRTGALGEMNVGNGNMTSDDHGNINIDGTPSYKLYTVDFN 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224 + ++ + + V V++ LE SN N + M Q++ + F + Sbjct: 181 DYNTLTKVGDNLYTGTNAAE-----TNVVVRQKSLEKSNVNIVNTMSQLMTTMRSFETDQ 235 Query: 225 TLIDENEKSMLEAIRN 240 + ++++ + I Sbjct: 236 KAVQSIDETLEKLINE 251 >gi|30248323|ref|NP_840393.1| flagellar basal body rod protein FlgF [Nitrosomonas europaea ATCC 19718] gi|30138209|emb|CAD84217.1| Flagella basal body rod protein [Nitrosomonas europaea ATCC 19718] Length = 247 Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats. Identities = 51/241 (21%), Positives = 90/241 (37%), Gaps = 6/241 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + L + +TV+ N++N T GFR F V + + +FV Sbjct: 1 MDRLIYTAMTGALHTMTQQATVSHNLANASTTGFRAQTDAFRAV--PVYGESLPTRAFVL 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 G+ T LD A++G W A++ TR G K+ +G L + G Sbjct: 59 DSTTGADFTPGAIQQTNRPLDVAVQGSGWIAVQLENGEEAYTRHGNLKMDANGILQTQQG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176 + + I + I G + ++ A + VD + R G Sbjct: 119 FNIKGESGPITIPPDSRIAIGKDGSVSVLPSDSRMTAVSIVGRIKLVDPPAEQLVRGEDG 178 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + V + G LE SN N + EM +MI L ++F+ +++ +++ + Sbjct: 179 LFRLKEGGQAPVSEKVALIDGALESSNVNVISEMVKMITLARQFDMQMKMLENAQQNAQQ 238 Query: 237 A 237 A Sbjct: 239 A 239 >gi|323498419|ref|ZP_08103415.1| flagellar basal body rod protein FlgF [Vibrio sinaloensis DSM 21326] gi|323316492|gb|EGA69507.1| flagellar basal body rod protein FlgF [Vibrio sinaloensis DSM 21326] Length = 249 Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 49/240 (20%), Positives = 92/240 (38%), Gaps = 9/240 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + ++ Q L A+N++N T GFR + + + F Sbjct: 1 MDRALFLAMSGAKQNMQALQLRANNLANVSTTGFRADLAQARSM--QAYGEGLPSRVFSM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASG 119 + + + + GS I+TG +LD +EG+ W A+ + LTR+G KV +G LVS +G Sbjct: 59 TERPGHNFQQGSVITTGRDLDVTIEGNGWIAVLDKSGKEGLTRNGNLKVDVNGLLVSGNG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGE------KGEISQKGKVIATMGLYSVDMSQGFVRRE 173 + + ++ + + + +Q + Sbjct: 119 NLVIGETGGPITLPIPLSKVEIGTDGTISVVPQGAPADAIEVVDRIKLTNTNNQSLFKDV 178 Query: 174 NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 N P E + V + G +E SN N++ EM +I L ++F ++ E+ Sbjct: 179 NGLFRAKDPNAAYEADADVKLLTGAIEGSNVNAIGEMTSLIDLQRQFEMQVKMMSTAEEM 238 >gi|300311353|ref|YP_003775445.1| flagellar basal body rod protein FlgF [Herbaspirillum seropedicae SmR1] gi|300074138|gb|ADJ63537.1| flagellar basal body rod FlgF protein [Herbaspirillum seropedicae SmR1] Length = 245 Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 7/245 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M ++ ++ +T ++N++N T GFR F + D +FV Sbjct: 1 MDRLVYTAMSGAKHTLEQQATASNNLANATTTGFRAQLNTFRA--APVVGDGLPTRTFVV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119 G TG LD A++G W A+++ G TR+G FK+ ++G L + SG Sbjct: 59 DSTAGNDFSQGPIQDTGRALDVAIQGRGWIAVQTADGGEAYTRNGSFKINENGILQTQSG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176 + + D + I I G I G A L V+ + ++R + G Sbjct: 119 QTVLGDGGPITIPPDATVAIAADGTVSAIPTNGIPNAVNVLGRIKLVNPDEKNMKRGDDG 178 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + I + + V + G LE SN N + M MI+L+++F +I E + Sbjct: 179 LFRTITG-AAQPDANVRLASGALEGSNVNVVEAMVNMINLSRQFEMNMKMIQTAESDATK 237 Query: 237 AIRNI 241 A + Sbjct: 238 ATSIL 242 >gi|114762163|ref|ZP_01441631.1| putative flagellar basal body rod protein [Pelagibaca bermudensis HTCC2601] gi|114545187|gb|EAU48190.1| putative flagellar basal body rod protein [Roseovarius sp. HTCC2601] Length = 237 Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 65/236 (27%), Positives = 109/236 (46%), Gaps = 6/236 (2%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65 L+ Q L + + VA+N++N T G+R V FSE V D ++ AS Sbjct: 6 YTTLSRQQGLMREMRMVANNIANMATTGYRQQGVVFSEYVRQTDRDGS--VAMTASHVRN 63 Query: 66 LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125 S GS TG +LD A+EG+ +F +++P G LTR G F + G LV+ G + VLD Sbjct: 64 TSFAQGSLTRTGGQLDLAIEGEGFFLVQTPAGERLTRAGNFASSSAGDLVTQDG-HLVLD 122 Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185 P+ IP +G+ G +S G I +G+ VR P Sbjct: 123 SGGAPVFIPPDATDLAIGQDGTLSSNGAPIGQIGIVQPLDPGALVREGGVLFRAEAGYDP 182 Query: 186 LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 E V++GF+E +N + + ++ +MI + + + + ++ + AI+++ Sbjct: 183 AEA---PRVRQGFVESANVDPILQIARMIEVQRAYEMGQNFLQREDERVRAAIKSM 235 >gi|329901231|ref|ZP_08272756.1| Flagellar basal-body rod protein flgF [Oxalobacteraceae bacterium IMCC9480] gi|327549163|gb|EGF33755.1| Flagellar basal-body rod protein flgF [Oxalobacteraceae bacterium IMCC9480] Length = 245 Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 60/246 (24%), Positives = 101/246 (41%), Gaps = 6/246 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + ++ ST A+N++N T GFR F V ++ +FV Sbjct: 1 MDRMIYTAMTGAKHVMEQQSTTANNLANATTTGFRAQLDTFRAV--PVQGPGLATRAFVV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 G+ TG LD A++G W A++ P TR G KV ++G L + G Sbjct: 59 DSTVGADFSQGALQQTGRALDVAIQGKGWLAVDMPDGTEAYTRHGSLKVNENGLLQTQGG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEI---SQKGKVIATMGLYSVDMSQGFVRRENSG 176 V D + I I G + S+ G+ + + V+ + + R + Sbjct: 119 LNIVGDSGPITIPPDVNVTIGKDGTVSSVESGSKPGQAVIIGRIKLVNPPEETMTRGDDT 178 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + P +E VT+ G LE SN N + M MI L+++F +L+ E + + Sbjct: 179 LFRVKTPGGVEADPNVTLAEGALESSNVNVVDAMVNMISLSRQFEMHMSLLKNAETNSTK 238 Query: 237 AIRNIA 242 A + +A Sbjct: 239 AAQILA 244 >gi|253996318|ref|YP_003048382.1| flagellar basal-body rod protein FlgF [Methylotenera mobilis JLW8] gi|253982997|gb|ACT47855.1| flagellar basal-body rod protein FlgF [Methylotenera mobilis JLW8] Length = 246 Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 54/245 (22%), Positives = 99/245 (40%), Gaps = 6/245 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + ++ +T + N++N + GF++ F V + + +FV Sbjct: 1 MDRMIYTAMTGAKHILEKQATTSHNLANATSTGFKSQIDSFRAV--PVLSTGLPTRAFVV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 G+ ST LD A++GD W A++ TR+G K + +G L +A+G Sbjct: 59 DSTSGSDFNSGAIQSTNRNLDIAVKGDGWLAVQRADGSEAYTRNGSLKTSPNGLLQTANG 118 Query: 120 KYPVLDMAS---VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + D P + V ++ G + V+ Q + R + G Sbjct: 119 LTIMGDGGPITIPPDVAVSIGKDGTVSTVNNLTLPGPSNIIGRIKLVNPPQANLVRADDG 178 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + P + V+V +G LE SN N + M MI L+++F + LI E + + Sbjct: 179 LFTTKDGNPATADANVSVVQGALESSNVNVVDAMVTMISLSRQFETQMKLIQTAENNANK 238 Query: 237 AIRNI 241 A + + Sbjct: 239 ASQLL 243 >gi|330818584|ref|YP_004362289.1| flagellar basal body rod protein FlgF [Burkholderia gladioli BSR3] gi|327370977|gb|AEA62333.1| flagellar basal body rod protein FlgF [Burkholderia gladioli BSR3] Length = 250 Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 55/247 (22%), Positives = 90/247 (36%), Gaps = 7/247 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK--NDIDQKISF 58 M + ++ S +A+N++N T GFR + V ++ +F Sbjct: 1 MDRLIYTAMTGAGQALEQQSVIANNLANASTTGFRAQLATYRAVPMNFGEASNPTTTRTF 60 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSA 117 V G TG LD A++G W ++ +P TR G V ++G LV+A Sbjct: 61 VLDSTPGADYTPGPITRTGNPLDVAVQGPGWLSVLAPDGSEAYTRAGNLHVDENGQLVNA 120 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEIS---QKGKVIATMGLYSVDMSQGFVRREN 174 S V + I K I G ++ + L V+ + R + Sbjct: 121 SNLPVVGGGGPIAIPPNAKVTIGPDGTVSVLAAGDPPSAIAMIDQLKLVNPDPSTITRGD 180 Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 G+ P + VTV LE SN N + M M+ + F T LI +++ Sbjct: 181 DGLFRTTDGNPADADPNVTVAAESLEGSNVNPVAAMVSMLDNARAFQLHTKLISTADQN- 239 Query: 235 LEAIRNI 241 + I Sbjct: 240 EQTANQI 246 >gi|91785633|ref|YP_560839.1| flagellar basal body rod protein FlgF [Burkholderia xenovorans LB400] gi|91689587|gb|ABE32787.1| flgF; flagellar basal-body rod protein [Burkholderia xenovorans LB400] Length = 252 Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 54/249 (21%), Positives = 99/249 (39%), Gaps = 9/249 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI----DQKI 56 M ++ ++ + VA+N++N T GFR F V + + + Sbjct: 1 MDRLIYTAMSGSTQALEQQAIVANNLANASTTGFRAQLATFRAVPMSFGDGSSINDNTTR 60 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLV 115 +FV S G TG LD A++G W A+++ G TR G + ++G LV Sbjct: 61 TFVLSSTPGADYTPGPIQQTGNPLDVAIQGPGWLAVQTADGGEAYTRAGNLHIDENGQLV 120 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRR 172 +A+ + + + V + + I G ++ A + + V+ + R Sbjct: 121 NATNQVVLGNGGPVSVPPGAEITIGKDGTVSALTPGDPPTAVVTVDQLKLVNPDPQTMTR 180 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 + G+ P + VT+ LE SN N + M MI ++F T L++ +K Sbjct: 181 GDDGLFRTGDGNPADADPTVTLAPASLEGSNVNPVSAMVSMITNARQFQMQTKLLESADK 240 Query: 233 SMLEAIRNI 241 + A + Sbjct: 241 NDQSA-NQL 248 >gi|15895408|ref|NP_348757.1| flagellar basal body rod protein FlgG [Clostridium acetobutylicum ATCC 824] gi|15025131|gb|AAK80097.1|AE007715_2 Flagellar basal body rod protein [Clostridium acetobutylicum ATCC 824] gi|325509554|gb|ADZ21190.1| flagellar basal body rod protein FlgG [Clostridium acetobutylicum EA 2018] Length = 256 Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 47/256 (18%), Positives = 105/256 (41%), Gaps = 17/256 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M G++ A +++L ++++N++N+ T G+++ V FS+++ N Sbjct: 1 MLRIMWNGVSGMAAEQEKLDSISNNLANSSTTGYKSETVGFSDLLYETLNRKGYPVTNDD 60 Query: 56 -----ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVT 109 S V + + + GS + ++ A++G +F + +P R G F V Sbjct: 61 NNRYTGSGVKANEWIRNNAQGSLTPSDSKTALAIDGSGYFKVTTPDGTEAYERAGSFTVN 120 Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV----IATMGLYSVDM 165 +G +V +G Y +D + P + V + G IS + + + +Y V Sbjct: 121 ANGRIVDPNGNYLNIDYSVDPSTVKFTASNVAVAQDGTISIQNGQTTTNVGKINIYDVTG 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225 + + S + + + + +LE+SN + EM MI + + + Sbjct: 181 NDSMISVGKSL-FVPKAGAQMFVNNKSVIYQNYLENSNVDLGTEMTDMIVAQRAYQINSK 239 Query: 226 LIDENEKSMLEAIRNI 241 ++ + +M + N+ Sbjct: 240 SLETGD-NMWSIVNNM 254 >gi|312880336|ref|ZP_07740136.1| fagellar hook-basal body protein [Aminomonas paucivorans DSM 12260] gi|310783627|gb|EFQ24025.1| fagellar hook-basal body protein [Aminomonas paucivorans DSM 12260] Length = 264 Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats. Identities = 53/259 (20%), Positives = 89/259 (34%), Gaps = 25/259 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDIDQKIS 57 M G +A L E+ L V +N++N DT GFR F EV+ ++ Sbjct: 1 MFRGIYSGTSAMLVQEKMLDVVGNNLANVDTSGFRARIAVNKSFPEVLMDRVERYPEEGI 60 Query: 58 FVASGKEY------------------LSKEVGSFISTGTELDFALEGDAWFALESPR-GI 98 + G T LD AL+ + +F ++ Sbjct: 61 GPKRFNPRGRVPIGTLSLANVLHETAMRTAPGVMQVTNAPLDVALQEEGFFVVQDGAGNT 120 Query: 99 ILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158 TR G F+ D G LV+ G D +V I + + ++G++ G V + Sbjct: 121 FYTRSGHFQKNDQGQLVTHDGMLVQGDGGAVEIGDAVRYSL---NDRGQLLVNGAVAGQL 177 Query: 159 GLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 + S ++ E++ V GFLE SN N + EM +MI + Sbjct: 178 QVVRFPTPTRMRHVGKSLLAETPDSGAPEEVEQPKVAVGFLERSNVNVVEEMSRMIEANR 237 Query: 219 KFNSITTLIDENEKSMLEA 237 + + ++ Sbjct: 238 AYEVAAKTVTIQDELTSRL 256 >gi|150020363|ref|YP_001305717.1| hypothetical protein Tmel_0465 [Thermosipho melanesiensis BI429] gi|149792884|gb|ABR30332.1| protein of unknown function DUF1078 domain protein [Thermosipho melanesiensis BI429] Length = 233 Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats. Identities = 47/257 (18%), Positives = 99/257 (38%), Gaps = 40/257 (15%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS--- 57 M + LA +L T+++N+SN DT G+++ + F + Sbjct: 1 MYRGIYLASMGMLADITKLDTLSNNISNVDTAGYKSDSLAFKAYFEKQLYSFNPMPQKEE 60 Query: 58 -----------FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106 + + + G+ TG LDFA++G +F +E+ + TR G F Sbjct: 61 VEVKKIGSFEQALILDQVKTNYSQGTLEYTGHSLDFAIDGKGFFVVENAGKRMYTRAGNF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 K ++G L++ G Y + +I G V+ + + ++ Sbjct: 121 KANEEGYLITPEGYYVLGKNDQ------------------KIKLDGNVLEKLLVVALKNP 162 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 + G + +G++E SN N + EM +MI T+ + +++ Sbjct: 163 RKVGYTFFKGEEVRKENF--------RILQGYVEKSNVNIVREMVKMIEATRHYETLSKA 214 Query: 227 IDENEKSMLEAIRNIAS 243 + +++ + ++I + S Sbjct: 215 VTVHDELLNKSINSAGS 231 >gi|254785373|ref|YP_003072802.1| flagellar basal body rod protein FlgF [Teredinibacter turnerae T7901] gi|237683950|gb|ACR11214.1| flagellar basal-body rod protein FlgF [Teredinibacter turnerae T7901] Length = 250 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 47/238 (19%), Positives = 95/238 (39%), Gaps = 7/238 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + I ++ + + A+N++N +T GF+ + + + + Sbjct: 1 MDKALYIAMSGAKHNMRAQTVHANNLANVNTTGFKADFARARSMPIYFGEGHPTRAYALE 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 G + TG +LD A+EGD + A++SP TR G + G L + +G Sbjct: 61 EIPAT-DFRQGPLVETGRDLDVAVEGDGFIAVQSPDGSEAYTRAGSLFIDALGMLRTGNG 119 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176 + + + I +K EI G I+ V A + + V+ ++R G Sbjct: 120 LPVLGNGGPIAIPAAEKVEISGDGSITVIALGQGVDAPVQVDRIKLVNPPTDTIQRGIDG 179 Query: 177 --ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 + L V + GF+E SN N++ E+ ++ L +++ ++ ++ Sbjct: 180 LIHLLDDAQGELPADGNVRIISGFVEGSNVNAVNELTSVMSLARQYEMQVKIMQTVKE 237 >gi|332284020|ref|YP_004415931.1| flagellar basal body rod protein FlgF [Pusillimonas sp. T7-7] gi|330427973|gb|AEC19307.1| flagellar basal body rod protein FlgF [Pusillimonas sp. T7-7] Length = 248 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 47/241 (19%), Positives = 84/241 (34%), Gaps = 4/241 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + ++ + +++N++N +T GFR + V Sbjct: 1 MDRIIYTAAGGAARVLEQQAVISNNLANVNTAGFREQMAIYRSVPVVGAAPSLPTRVSTV 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + G + TG LD A+ GD WF++++P+G TR G F V + LV+ G Sbjct: 61 TSTPSSHMGQGVMVETGHALDAAITGDGWFSVQTPQGEAYTRAGEFAVNEQSLLVNLQGY 120 Query: 121 YPV----LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + + + G + + L V+ + R G Sbjct: 121 PVLSADGAPIEIPERGAVTFSGDGQISALGAGDRPNDIQLIGQLKLVNPQAADLVRGGDG 180 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + P + V + GF+E SN N M MI ++F +I + + Sbjct: 181 LFRAANGQPAQADPEVRMIAGFVEKSNVNPAEAMVGMIANARRFEMQMKVIQDASSNAER 240 Query: 237 A 237 A Sbjct: 241 A 241 >gi|37360908|dbj|BAC98362.1| flagellar basal-body rod protein [Burkholderia glumae] Length = 251 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 40/248 (16%), Positives = 85/248 (34%), Gaps = 20/248 (8%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------------QKISF 58 A + ++ +++N++N T GF+ + F +++ Q + Sbjct: 1 MNAQQAQMDVISNNLANVSTNGFKGSRAVFEDLLYQTVRQPGANSTQQTELPSGLQLGTG 60 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSA 117 V G+ TG D A+ G +F + P TRDG F+ + G LV++ Sbjct: 61 VQQVATERLYTQGNLQQTGNSRDVAINGQGFFQVLMPDGTTAYTRDGSFQANNQGQLVTS 120 Query: 118 SGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 +G + + V S I +M L + +G + Sbjct: 121 AGYQVLPAITVPQNAQSLTIGADGVVTVTQPGSTNAVQIGSMQLATFINPEGLNALGQNL 180 Query: 177 ISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 + ++ +G++E SN N E+ MI + + + + ++ Sbjct: 181 FAETTSSGAPNVTTPGLNGAGSLNQGYVESSNVNVXQELVNMIQTQRAYEINSKAVTTSD 240 Query: 232 KSMLEAIR 239 + + + Sbjct: 241 QMLQTVTQ 248 >gi|296531728|ref|ZP_06894556.1| flagellar basal-body rod protein FlgF [Roseomonas cervicalis ATCC 49957] gi|296267944|gb|EFH13743.1| flagellar basal-body rod protein FlgF [Roseomonas cervicalis ATCC 49957] Length = 252 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 59/250 (23%), Positives = 111/250 (44%), Gaps = 9/250 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + L+ QLAL Q++ VA+N++N T G+R + F V + ++I+FV Sbjct: 1 MDSPSTVSLSGQLALRQQMDVVANNLANATTSGYRGDRTLFQSYVTRLAVP-GREIAFVQ 59 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESP-RGIILTRDGRFKVTDDGSLVSASG 119 Y+ G STG LD A+EG+A+F ++ P TRDGRFK+ D L + G Sbjct: 60 DRATYIENRQGPIGSTGNPLDLAIEGEAFFGVQRPGGAPGYTRDGRFKIRPDNVLADSQG 119 Query: 120 KYPVLDMASV---PIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + + + + P +I + N + + + LY+ +G + + Sbjct: 120 RAVLGEGGAPITLPERISAIEIRANGNILVTSEGRVEQAGCIALYAGGDMRGLRKSGDGL 179 Query: 177 ISPNI----PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 P P + V + +G LE S ++ E+ + + + + S+ +I +++ Sbjct: 180 FEIPAESVQPVDPDAPGTRVRLAQGALEGSTVQTVSELANLALVQRAYESMQRIISDDDS 239 Query: 233 SMLEAIRNIA 242 + I + Sbjct: 240 RIRRLIETVG 249 >gi|332531619|ref|ZP_08407516.1| flagellar basal-body rod protein FlgF [Hylemonella gracilis ATCC 19624] gi|332038982|gb|EGI75411.1| flagellar basal-body rod protein FlgF [Hylemonella gracilis ATCC 19624] Length = 246 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 50/244 (20%), Positives = 92/244 (37%), Gaps = 5/244 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + A + R S +++N++N T GFR + V ++ + F Sbjct: 1 MDRIIYTAMTGANAAQHRQSVLSNNLANVSTNGFRAELSTYRAV--PLRGEGATTRVFAL 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119 G + TG +LD + +WFA++ G TR+G F+V+ G L +++G Sbjct: 59 EATAGQRDAPGPSMRTGRDLDAMPQQSSWFAVQGLDGGEAYTRNGSFEVSPQGVLQTSNG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS--QGFVRRENSGI 177 + D S G+ T+G + Q ++R + G+ Sbjct: 119 LPLLSDGGSPITVPENAVVSLGSDGTISAQSAGQPPTTLGRIKLATPTEQDRLKRGDDGL 178 Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + L + + G LE SN N++ M MI ++F ++ E A Sbjct: 179 FRPVSGGQLPSDTNARMDVGVLEGSNVNAVETMVGMIQTARQFEQQMRMLQTAESDDRSA 238 Query: 238 IRNI 241 + + Sbjct: 239 AKLL 242 >gi|268317780|ref|YP_003291499.1| flagellar basal body rod protein [Rhodothermus marinus DSM 4252] gi|262335314|gb|ACY49111.1| flagellar basal body rod protein [Rhodothermus marinus DSM 4252] Length = 242 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 44/244 (18%), Positives = 101/244 (41%), Gaps = 6/244 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M A+ ++ +A+N++N +T G++ + F E + D ++ Sbjct: 1 MLLRLQNAAASMTEAIRQQERLANNLANVNTAGYKQER-FFVEALNERL-DAERSPRSDR 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG--IILTRDGRFKVTDDGSLVSAS 118 ++ G+ TG+ LD A+EGD +F + TR G+F++ +G L + Sbjct: 59 RLTQWNDLTQGALEHTGSPLDVAIEGDGFFVVTDAATGATFYTRAGQFRLDGEGYLRTID 118 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178 G + + + +++ ++ + G + + +A + + + R E + + Sbjct: 119 GLLVEGEDGPIQLLPHERNRTLSISQDGVLRADEREVARLRIVRFARPEALQRVEGARFA 178 Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 + ++ GFLE SN N + M +MI +F + +I ++ + + Sbjct: 179 ATDQE--PLPVETPHLRPGFLESSNVNPVLAMTEMIEHFHRFETQQKVIQTTDQLLGQIT 236 Query: 239 RNIA 242 R++ Sbjct: 237 RDLG 240 >gi|169827129|ref|YP_001697287.1| flagellar basal-body rod protein flgG [Lysinibacillus sphaericus C3-41] gi|168991617|gb|ACA39157.1| Flagellar basal-body rod protein flgG (Distal rod protein) [Lysinibacillus sphaericus C3-41] Length = 322 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 54/319 (16%), Positives = 96/319 (30%), Gaps = 80/319 (25%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-------- 52 M S G++ + +L + +N++N +TVGF+ +V F +++ + Sbjct: 1 MLRSMYSGISGLKNFQTKLDVIGNNIANVNTVGFKKGRVLFKDLMSQTQAGASAATATRG 60 Query: 53 ----DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP------------- 95 Q GS TG LD +EGD +F + Sbjct: 61 GVNPQQVGLGSQLAAIDTIHGGGSLQGTGRGLDLGIEGDGFFMVADANGAPDPDSGFIGE 120 Query: 96 ---RGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEIS--- 149 + TR+G F + +G LV+A GKY V A I + D+ N + S Sbjct: 121 EGFNNTLFTRNGVFYMDSNGYLVNADGKYLVGVSAGEDIVMEADDDGINPDDAPIASGDE 180 Query: 150 --------------------------------------------QKGKVIATMGLYSVDM 165 K + + Sbjct: 181 GANLFDDDGVLDPEDGEVGPIRIPTTAKEISIGANGTIEYVDLNGNRKWAGQLIMAKFPN 240 Query: 166 SQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 + G + + V G +E SN + E +MI + F Sbjct: 241 AGGLAKVGGNYYQQTANSGAAYAQVATVAGMGKVVPGTVEMSNVDLSEEFTEMIVAQRGF 300 Query: 221 NSITTLIDENEKSMLEAIR 239 + T +I +++ + E + Sbjct: 301 QANTRIITTSDEVLQELVN 319 >gi|144897831|emb|CAM74695.1| Flagellar basal body rod protein:Protein of unknown function DUF1078 [Magnetospirillum gryphiswaldense MSR-1] Length = 273 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 52/240 (21%), Positives = 118/240 (49%), Gaps = 7/240 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND---IDQKIS 57 M+ + I L+ Q AL ++L +A NM+N +T G+++ ++ F E + ++ +K+S Sbjct: 30 MENTSYIALSRQNALWRQLDVIAGNMANANTPGYKSEQMMFREYLMDTRSSDRATGKKLS 89 Query: 58 FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSA 117 +V G+F T LD AL D +F +E+ G+ TR+G F++ + G LV++ Sbjct: 90 YVQDIGLLRDTREGAFTKTDNPLDLALHNDGFFQVETEAGMRYTRNGHFRLDEGGMLVNS 149 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177 G + + I + + V G +S + ++A + + Q + +S Sbjct: 150 QGAAVMDTGDNPII-LAPNETRITVTPDGSVSTENGIVAKIKVVRFANDQDMRKIGDSLY 208 Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 P + ++ ++ +G +E+SN + E+ +M + +++ ++ ++++ + ++A Sbjct: 209 ETTQDP---DTIARPSIVQGMMEESNVQPVVEITKMTEVLRQYQALQNILEKEHERQMKA 265 >gi|220924579|ref|YP_002499881.1| flagellar basal body rod protein FlgF [Methylobacterium nodulans ORS 2060] gi|219949186|gb|ACL59578.1| flagellar basal body rod protein [Methylobacterium nodulans ORS 2060] Length = 248 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 65/247 (26%), Positives = 115/247 (46%), Gaps = 9/247 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA-----IKNDIDQK 55 MQ + IGL+AQ+AL + L +A+NM+N T GF+ +F E + D++ Sbjct: 1 MQNAQLIGLSAQVALGRELEVIANNMANVSTTGFKARTTRFQEYLMPKASAETFRRPDRR 60 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115 +S+V L G +TG L+ A+ GDA+FA+++P+G TR+G F++ G LV Sbjct: 61 LSYVIDAGTPLDLSQGPIETTGNPLNAAIRGDAFFAVQTPQGERYTRNGAFELNAQGQLV 120 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 ++ G + D PIQ ++ +G G IS + L Q + Sbjct: 121 TSDGNLVLGD--GGPIQFNPQETGAAIGPDGTISTNQGNRGKLRLVRFSDPQALSNAGAN 178 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 + PL + V+ G +E SN + + M +M+ + + + ++ + + Sbjct: 179 LYAATAA--PLPAGTQARVEPGAVERSNVSPVLTMTRMMEVNRIYALVSDSVSRMDALRG 236 Query: 236 EAIRNIA 242 AI+ +A Sbjct: 237 SAIQRLA 243 >gi|218460753|ref|ZP_03500844.1| flagellar basal body rod protein FlgG [Rhizobium etli Kim 5] Length = 244 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 40/243 (16%), Positives = 86/243 (35%), Gaps = 21/243 (8%) Query: 20 STVADNMSNTDTVGFRTIKVKFSEVVGAIKN--------------DIDQKISFVASGKEY 65 +A+N++N +T G + + +F++++ + + V + Sbjct: 1 EVIANNIANINTTGSKRARAEFTDLLYQTERAKGVANRANQAVVPEGANIGLGVQTSAVR 60 Query: 66 LSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASGKYPVL 124 G TG +LD AL G +F ++ + + TR G F D G LV+ G + Sbjct: 61 NLHLQGELTQTGNDLDVALIGKGFFQIQSTDGTTLYTRAGAFNKNDQGQLVTIDGYEVLP 120 Query: 125 DMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183 + V K + V+ + L G ++ Sbjct: 121 GITIPQGSTELTISRSGEVSVKLPGATDATVLGQLTLADFVNEAGLQPIGDNLFQETAAS 180 Query: 184 TPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 + +K+G+LE SN + + E+ ++I + + + +I ++ Sbjct: 181 GEAVVGNPDEEGFGYMKQGYLESSNVDPVKEITELISAQRAYEMNSKVITTADEMASIVS 240 Query: 239 RNI 241 +N+ Sbjct: 241 KNL 243 >gi|224825165|ref|ZP_03698271.1| flagellar basal-body rod protein FlgF [Lutiella nitroferrum 2002] gi|224602836|gb|EEG09013.1| flagellar basal-body rod protein FlgF [Lutiella nitroferrum 2002] Length = 246 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 50/246 (20%), Positives = 94/246 (38%), Gaps = 6/246 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + + +T + N++N T G++ +V F + + D ++V Sbjct: 1 MDRMIYLAMTGAKHVMTQQATTSQNLANVHTNGYKADQVSFRAL--PVVGDGAPTRTYVV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 GS TG + DFAL +F +++ +RDG F +G L + SG Sbjct: 59 DNTIGHDLSQGSLQQTGNDTDFALGTPGFFTVQTADGREAYSRDGGFVADPNGMLRTRSG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG---KVIATMGLYSVDMSQGFVRRENSG 176 + D + + I G G L V+ + V + G Sbjct: 119 LPILGDGGPITVPTGSSVVIGPDGTVVTTPTSGADRTPQIAGQLKLVNPGERAVYKGEDG 178 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + V V G LE SN N++ + QMI ++F+ L+ ++++ + Sbjct: 179 LFRLNAGGNATASDDVKVVSGALEGSNVNAVESLVQMISHARQFDLNVKLMQTSDQNEQK 238 Query: 237 AIRNIA 242 A + +A Sbjct: 239 ASQILA 244 >gi|260886210|ref|ZP_05897473.1| flagellar basal-body rod protein FlgG [Selenomonas sputigena ATCC 35185] gi|330839794|ref|YP_004414374.1| flagellar hook-basal body protein [Selenomonas sputigena ATCC 35185] gi|260863929|gb|EEX78429.1| flagellar basal-body rod protein FlgG [Selenomonas sputigena ATCC 35185] gi|329747558|gb|AEC00915.1| flagellar hook-basal body protein [Selenomonas sputigena ATCC 35185] Length = 264 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 51/265 (19%), Positives = 109/265 (41%), Gaps = 27/265 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51 M + + + R +A+N++N + G++ + +F+ ++ ND Sbjct: 1 MLRGLYVAASGMITETNRTDVIANNLANAASSGYKRDEAINQEFAPMLLKRINDNQDDAV 60 Query: 52 --------------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG 97 + + + GS +TG LD A+ G+ +FA+++P+G Sbjct: 61 TSFRGFRLEQGPPRVGNLGLGAYTAEIATDHVQGSMKTTGNMLDLAVSGEGYFAIQTPQG 120 Query: 98 IILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157 + TRDG F +G+LV+A G+ + A + +G KGEI + I T Sbjct: 121 VRYTRDGSFYRQANGALVTARGQAVL--NAQNRPIMLPDSANITIGAKGEIMDGQRRIDT 178 Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217 + D + +++ ++ P P + +++G LE+SN N EM +I+ Sbjct: 179 LQFVQFDDRRAVLKQGDNLYRPQQGAEPQ--AATGDIQQGMLENSNVNIASEMVSLINNY 236 Query: 218 QKFNSITTLIDENEKSMLEAIRNIA 242 + + + + + + + + + Sbjct: 237 RIYEAGSRALVTQDSMTDKTVNEVG 261 >gi|170748127|ref|YP_001754387.1| flagellar basal body rod protein [Methylobacterium radiotolerans JCM 2831] gi|170654649|gb|ACB23704.1| flagellar basal body rod protein [Methylobacterium radiotolerans JCM 2831] Length = 246 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 84/247 (34%), Positives = 140/247 (56%), Gaps = 9/247 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 MQ+S + L+AQ+ALEQRL+TVA N++N TVG+R +VKF ++ + + ++F Sbjct: 1 MQSSLYVTLSAQMALEQRLNTVAANVANLGTVGYRAEEVKFETILSQAGH---RDVAFAT 57 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 G+ +LS++ G I T + LD L+GD W A+ PRG++ TRDGR +VT G L G Sbjct: 58 PGETFLSRKAGPLIKTDSPLDVGLQGDGWLAVRGPRGMVYTRDGRMQVTAAGDLQDLDG- 116 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 +LD P+ + + +G+ G +SQ I +G++ +D + R ++ + Sbjct: 117 RAILDPGGSPLTVDPEGPPLTIGQDGIVSQGTNQIGALGVFRLDPAAKLTRVAGGAVASD 176 Query: 181 IPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 +P P+ D + V V++GF E +N N + EM ++I +T+ F S + E+E S+ Sbjct: 177 VPGRPILDFNQRDETTVRVQQGFQEGANVNPVMEMSRLIEITRAFQSAAAAVAESESSLQ 236 Query: 236 EAIRNIA 242 +AIR + Sbjct: 237 DAIRGLG 243 >gi|89095665|ref|ZP_01168559.1| flagellar basal-body rod protein [Bacillus sp. NRRL B-14911] gi|89089411|gb|EAR68518.1| flagellar basal-body rod protein [Bacillus sp. NRRL B-14911] Length = 279 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 52/280 (18%), Positives = 100/280 (35%), Gaps = 42/280 (15%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKND------ 51 M F + L+ ++R + +NM+N++T GF+ + F E++ Sbjct: 1 MFRGFYTVASGMLSQQRRTEMLTNNMANSNTPGFKADQSSMRAFPEMLLQSAGQLEIPVQ 60 Query: 52 ----------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA------------- 88 I + V + + G TG D AL Sbjct: 61 NRLKMPLNKEIGSINTGVYMQENTPNFLQGDLRETGQNTDLALVDITMPEDEETGISASV 120 Query: 89 -WFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGE 147 + + G TR+G F + +G L +ASG Y + +I + F V G+ Sbjct: 121 FFKVSGADGGTRYTRNGDFTLDGEGFLTTASGMYVL---DGQDNRIQLGSDRFTVSNAGQ 177 Query: 148 ISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDS 202 I+ + A +G + ++ G+ P +G +++GFLE S Sbjct: 178 ITGENGETAQLGFGFSENPAELIKE-GDGLFRTEDGAPLAEAVDNPEAGFALQQGFLESS 236 Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 N ++ M M+ + F + ++ ++SM + + Sbjct: 237 NVDASRTMTDMMTAYRAFEANQKVLQAYDRSMEKMANEVG 276 >gi|255099439|ref|ZP_05328416.1| flagellar basal body rod protein FlgG [Clostridium difficile QCD-63q42] Length = 253 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 51/254 (20%), Positives = 101/254 (39%), Gaps = 13/254 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M T F A A + +L +++N++N+D+ G++ I +++S++V + N Sbjct: 1 MYTMFYTSKTALSANQSKLDIISNNIANSDSTGYKKINMEYSDLVDEVLNRPSYPTNGKD 60 Query: 54 -QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDD 111 + + + E G+ T ++ + A++G+ +F + G TR+G F V Sbjct: 61 ISTGTGAKATAPMRNYEQGALAPTDSKSNLAIDGEGFFRVIRKDGTYAYTRNGGFNVDAL 120 Query: 112 GSLVSASGK--YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169 G +V +G D V GE+ K I + LY +Q F Sbjct: 121 GKIVDDNGNILDVQFDAGYNYNNTNIDSTNLTVSRNGELFVDNKKIGKINLYQPIGTQNF 180 Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 + +S + V + +G+ E SN + E +I + F + I Sbjct: 181 ISEGDSLFVATDAAQIKQV-EKVDIVQGYRERSNVSLQEEFVDLIATQRAFQMNSKGIKT 239 Query: 230 NEKSMLEAIRNIAS 243 ++ M + N+ + Sbjct: 240 ADE-MWQIANNLRA 252 >gi|254485859|ref|ZP_05099064.1| flagellar basal-body rod protein FlgF [Roseobacter sp. GAI101] gi|214042728|gb|EEB83366.1| flagellar basal-body rod protein FlgF [Roseobacter sp. GAI101] Length = 237 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 64/241 (26%), Positives = 110/241 (45%), Gaps = 6/241 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + L Q+ L + + VA+N++N T G+R+ V FSE V + D +S Sbjct: 1 MDNASYTILTRQMGLAREMQMVANNIANAATTGYRSEGVIFSEFVQTV--DRGPSLSMGT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + + + G+ T DF +EGD +F +E+P G LTR G F G LV+ G Sbjct: 59 ANVQNTNYMQGALTQTNGTFDFGIEGDGYFLIETPAGERLTRAGSFTPNSAGELVTYDGF 118 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 LD PI +PQ V G S G IA +G+ S VR + + Sbjct: 119 RV-LDAGGGPIFVPQDAGALGVSSDGTFSVNGAPIAQLGIVSPIAPLDMVREDGVMFRAD 177 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 P + V +GF E SN +++ ++ +MI + + + + ++ ++ + A+++ Sbjct: 178 EGVEPAVN---ARVVQGFTEGSNVDAVSQLARMIEVQRAYEMGQSFLESEDERIRTALKS 234 Query: 241 I 241 + Sbjct: 235 L 235 >gi|83647172|ref|YP_435607.1| flagellar basal body rod protein FlgF [Hahella chejuensis KCTC 2396] gi|83635215|gb|ABC31182.1| Flagellar basal body rod protein [Hahella chejuensis KCTC 2396] Length = 248 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 50/247 (20%), Positives = 106/247 (42%), Gaps = 8/247 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + I ++ A+N++N +T GF++ ++ + + + ++ Sbjct: 1 MDKALYIAMSGAKQNMLSQRGHANNLANANTTGFKSDFMQARSM--PVFGEHYPSRAYAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119 + + E+GS + TG +LD A+ G+ W A+++P G TR+G + +G L + SG Sbjct: 59 TERPATDFEMGSLMQTGRDLDVAVAGNGWIAVQAPDGGEAYTREGELLLDVNGVLRTGSG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK---VIATMGLYSVDMSQGFVRRENSG 176 + + + + K I G + G + + V+ + + G Sbjct: 119 LPVLGNGGPIAVPPAAKLNIGVDGTISIVPLGGNPDEIQEVDRIRLVNPPAEDLEKGVDG 178 Query: 177 ISPNIPPTPLEDLSGVTVK--RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 + P P L V+ G+LE SN N++ EM +++ L+++F ++ + + Sbjct: 179 LIHLKPDVPGPALPDGLVRLESGYLESSNVNAVEEMTEILSLSRQFELQVKVMRAADDNS 238 Query: 235 LEAIRNI 241 A R + Sbjct: 239 EAAARLL 245 >gi|323495376|ref|ZP_08100453.1| flagellar basal body rod protein FlgF [Vibrio brasiliensis LMG 20546] gi|323310299|gb|EGA63486.1| flagellar basal body rod protein FlgF [Vibrio brasiliensis LMG 20546] Length = 249 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 57/241 (23%), Positives = 97/241 (40%), Gaps = 11/241 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + ++ Q L A+N++N T GFR + + + F Sbjct: 1 MDRALFLAMSGAKQNMQALQLRANNLANVSTTGFRADLAQARSM--QAYGEGLPSRVFSM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASG 119 + + + + GS I+TG +LD ++G W ++ + LTR+G KV +G LVS +G Sbjct: 59 TERPGHNFQQGSVITTGRDLDVTIQGQGWISVLDKTGQEGLTRNGNLKVDVNGLLVSGNG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172 L PI +P +G G IS + + VD +Q + Sbjct: 119 NLV-LGETGAPITLPIPVSKVEIGNDGTISVVPQGAPADAIEIVDRIKLTSTNNQSLFKD 177 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 N P E + V + G +E SN N++ EM +I L ++F ++ E Sbjct: 178 VNGLFRAKDPNAAYEADADVKLLTGAIEGSNVNAIGEMTSLIDLQRQFEMQVKMMSTAED 237 Query: 233 S 233 Sbjct: 238 M 238 >gi|300854231|ref|YP_003779215.1| flagellar basal-body rod protein [Clostridium ljungdahlii DSM 13528] gi|300434346|gb|ADK14113.1| flagellar basal-body rod protein [Clostridium ljungdahlii DSM 13528] Length = 262 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 50/261 (19%), Positives = 108/261 (41%), Gaps = 21/261 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + ++A A + +L+++++N++N+DTVG++ V+F+++V N Sbjct: 1 MLRAIWNSVSAMNAQQDKLNSISNNLANSDTVGYKKENVEFNDLVYETLNRKGYPTNSNG 60 Query: 56 -----ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVT 109 + V + + G TG + D A++GD +F + G R G F V Sbjct: 61 TNTINGTGVKATEWIRDNAQGPIQQTGLKTDMAIDGDGYFKVTLGNGTAAYERAGNFTVD 120 Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV------ 163 +G+LV ++G +++ + + +F + G++ +G SV Sbjct: 121 RNGNLVDSNGNKLEVNLTAEGSSLFNSGTVFKDNNFKVDEKTGQIYMNVGNQSVLYGKIN 180 Query: 164 ---DMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 + Q ++ + + + + +G LE SN + EM MI + F Sbjct: 181 IYNAVGQDAMKSIGDNLYQPANNVQMNINTKAHIIQGSLEQSNVDLGREMTDMIMAQRSF 240 Query: 221 NSITTLIDENEKSMLEAIRNI 241 + + +++ M I ++ Sbjct: 241 ELASKGLTTSDE-MWGLINSM 260 >gi|220903670|ref|YP_002478982.1| hypothetical protein Ddes_0391 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219867969|gb|ACL48304.1| protein of unknown function DUF1078 domain protein [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 265 Score = 143 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 61/262 (23%), Positives = 112/262 (42%), Gaps = 21/262 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF-- 58 MQ GL A L E R++ +A+N++N +T G++ V F + + D ++ Sbjct: 1 MQAGMFSGLFAALTTEHRMNFIANNLANANTRGYKRDTVAFKDTMVTYAFDEIREPLMNL 60 Query: 59 --------------VASGKEYLSKEVGSFISTGTELDFALEG-DAWFALESPRGIILTRD 103 V + GS +G LD A+ G +A+F + +P G LTR+ Sbjct: 61 KSKPLFPEPLNASRVRLAVSKIDFAQGSMQYSGNPLDMAINGENAFFRVATPTGDFLTRN 120 Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 G F ++++G++++ G P+ I IPQ V G++ V+ + L SV Sbjct: 121 GAFVLSENGTIMTPQGY-PLQAQGGGNIVIPQGTRHIQVSGDGQVIADNDVLGQIALVSV 179 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSG---VTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 D Q + N+ P E + +++GF E +N + EM MI + ++F Sbjct: 180 DNPQNLEKMGNNLYRPRENVQVAEGNAYLEGGRIEQGFTEAANVEVVPEMVNMIEVQRQF 239 Query: 221 NSITTLIDENEKSMLEAIRNIA 242 + ++ ++ A + Sbjct: 240 EAYQKVMQTSDTLDRAATEKVG 261 >gi|114765245|ref|ZP_01444377.1| hypothetical protein 1100011001307_R2601_00410 [Pelagibaca bermudensis HTCC2601] gi|114542380|gb|EAU45408.1| hypothetical protein R2601_00410 [Roseovarius sp. HTCC2601] Length = 249 Score = 143 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 57/246 (23%), Positives = 107/246 (43%), Gaps = 4/246 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-DQKISFV 59 M S + ++ ALE++L A+N++N ++ GF+ +V F + + + ++V Sbjct: 1 MDNSTYVAISKLTALERQLDVTANNIANANSSGFKAERVLFETYLQKDDASLAGEGTNYV 60 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSAS 118 Y+ G + TG LD AL G WFA E P + RDG+ + G + +AS Sbjct: 61 LDRGSYVDDTPGVVVQTGNPLDLALTGQGWFAYEMPDGRMAYGRDGQLVLDAQGQVTTAS 120 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDMSQGFVRRENSGI 177 G + + P+ + + G S +G V+ +G++ + Q R Sbjct: 121 GAQILDLGGAPLNIPPEFAASVTISDDGVISSPEGGVMGQVGIFELPDRQTLSRGGAGMF 180 Query: 178 SPNIPPTPLEDLSGV-TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 PN L +V +G +E SN + E+ ++I++ Q + L+ +++ E Sbjct: 181 VPNAEAQGLAPDETGSSVIQGAVESSNVQPVTEVTRLINIQQAYQHALNLVASDDELKKE 240 Query: 237 AIRNIA 242 + I Sbjct: 241 MLTRIG 246 >gi|260429533|ref|ZP_05783510.1| flagellar basal-body rod protein FlgF [Citreicella sp. SE45] gi|260420156|gb|EEX13409.1| flagellar basal-body rod protein FlgF [Citreicella sp. SE45] Length = 237 Score = 143 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 64/236 (27%), Positives = 112/236 (47%), Gaps = 6/236 (2%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65 L+ QL L + + +A+N++N T G+R V FSE V + ++ A+ Sbjct: 6 YTTLSRQLGLSREMQMIANNIANAATTGYRQQGVVFSEYVRQTDDSGS--VAMSAAHVRN 63 Query: 66 LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125 S E G+ TG +LD A+EGD +F +++P G LTR+G F V+ G LV+ G LD Sbjct: 64 TSFEQGALTRTGGQLDLAIEGDGFFLIQTPGGERLTRNGAFAVSAQGDLVTQDGYAV-LD 122 Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185 P+ +P + G +S KG I +G+ VR + P Sbjct: 123 AGGAPVFVPPDASDLAFAQDGTMSSKGTPIGQVGIVQPVDQGAMVREGGVMFRADAGYEP 182 Query: 186 LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 E V +GF+E+SN + + ++ +MI + + + + + ++ + AI+++ Sbjct: 183 AET---PRVMQGFVENSNVDPILQIARMIEVQRAYEMGQSFLQREDERVRAAIKSM 235 >gi|88799022|ref|ZP_01114603.1| Flagellar basal body rod protein [Reinekea sp. MED297] gi|88778249|gb|EAR09443.1| Flagellar basal body rod protein [Reinekea sp. MED297] Length = 247 Score = 143 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 50/238 (21%), Positives = 104/238 (43%), Gaps = 7/238 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + I + ++ ++N++N T GF+ + + + + +F Sbjct: 1 MDRAIYIAMTGAKNNMMAQTSHSNNLANARTFGFKADWAQARAI--PVWGEHHPSRAFSM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASG 119 + + G+ I TG ELD A+ GD +FA+ ++ TR G F VT G L++ +G Sbjct: 59 TERPASDFNDGALIETGNELDTAITGDGFFAVLDAEGQEAYTRRGDFSVTPLGELINGAG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQ---KGKVIATMGLYSVDMSQGFVRRENSG 176 + + + + + +K EI G ++IA L V+ + + G Sbjct: 119 ESVIGEGGPIVLPPYEKVEIAGDGTISIRPAGAGPNEMIAVDALKIVNPNFQDFEKGTDG 178 Query: 177 ISPNIPPTPL-EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 + + P+ D ++V GF+E SN NS++E+ ++ L +++ + ++ + Sbjct: 179 LFRPVEGAPILPDDPLLSVVSGFVEASNVNSVHELTNLLALNRQYETQVKMMKTADDV 236 >gi|295697723|ref|YP_003590961.1| fagellar hook-basal body protein [Bacillus tusciae DSM 2912] gi|295413325|gb|ADG07817.1| fagellar hook-basal body protein [Bacillus tusciae DSM 2912] Length = 265 Score = 143 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 51/265 (19%), Positives = 99/265 (37%), Gaps = 25/265 (9%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV-----------GAIKN 50 G + A ++ +A++ +N +T G+++ + FS+++ Sbjct: 1 MRVLWTGASGMSAASHWVNAMANDAANMNTTGYKSEDLAFSDLLAVHYAPGVRIPAPDTP 60 Query: 51 DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV-- 108 S V + G TG +LD A EG+ +F + P G+ TRDG F+V Sbjct: 61 PGLPVGSGVRAAARVSDWSQGPLQETGRKLDVAWEGEGFFVVSGPEGMRYTRDGSFQVSV 120 Query: 109 -TDDGSLVSASGKYPVLDMASVPIQIPQKDEI-----FNVGEKGEISQKGKVIATMGLYS 162 + + + + VLD PI + D + G ++ IA +G Sbjct: 121 DPAGQATLVTADGHVVLDEYGAPIDLTGVDLSTLAIGPDGRITGSVAGTPTDIAVLGRVV 180 Query: 163 VDMSQGFVRRENSGI-----SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217 D Q ++ N+ P P + L +++G+LE SN M +++ Sbjct: 181 FDHPQRLIKAGNNLYDAGTEVPLTPADIADPLRFGRLRQGYLEASNVELTDVMTKLMEAE 240 Query: 218 QKFNSITTLIDENEKSMLEAIRNIA 242 + + + ++ M N+ Sbjct: 241 RLYALSARAVLTADQMM-SMANNLR 264 >gi|260222469|emb|CBA32064.1| Flagellar basal-body rod protein flgF [Curvibacter putative symbiont of Hydra magnipapillata] Length = 246 Score = 143 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 51/240 (21%), Positives = 87/240 (36%), Gaps = 5/240 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + A R S +A+N++N T GFR + V ++ + F Sbjct: 1 MDRLIYTAMTGANAAASRQSVLANNLANVSTNGFRAQLATYRAV--PLRGEGATTRVFAL 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119 G + T LD +GDAW ++ TR+G +V DG+L + +G Sbjct: 59 EATAGHLNTPGPAMRTDRSLDVMAKGDAWLTVQGLDGTEAYTRNGHIEVATDGTLTTGNG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS--VDMSQGFVRRENSGI 177 + S + + +G V ++ ++R G+ Sbjct: 119 LQVLSSDGSPITSPAGAELTVQPDGNVSAKVGNQPANVIGRLKLVVPTAEDPLKRGGDGL 178 Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + PL V+ G LE SN N++ M MI ++F + T L+ E + A Sbjct: 179 FRTLSGDPLNSEDTARVQAGMLEGSNVNAIEAMVGMIQTARQFEAQTRLMQTAESNDRAA 238 >gi|170742326|ref|YP_001770981.1| flagellar basal body rod protein FlgF [Methylobacterium sp. 4-46] gi|168196600|gb|ACA18547.1| flagellar basal body rod protein [Methylobacterium sp. 4-46] Length = 248 Score = 143 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 65/247 (26%), Positives = 114/247 (46%), Gaps = 9/247 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND-----IDQK 55 MQ + IGL+AQ+AL + L +A+NM+N T GF+ F E + D++ Sbjct: 1 MQNAQLIGLSAQMALGRELEVIANNMANVSTTGFKGRTTHFQEYLMPKARAETFRMPDRR 60 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115 +S+V L G STG L+ A+ GDA+FA+++P+G TR+G F++ G LV Sbjct: 61 LSYVIDAGTPLDLAQGPIESTGNPLNAAIRGDAFFAVQTPQGERYTRNGAFELNAQGQLV 120 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 ++ G + PIQI ++ +G G +S + L + + + Sbjct: 121 TSDGNLVLG--EGGPIQINPQETGLAIGADGTVSTSQGNRGRIRLVAFADPRQLTNAGAN 178 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 + + P P ++ G LE SN + + M +M+ + + + + I + Sbjct: 179 LYAASAP--PRPAGPLARIEPGALERSNVSPVLTMTRMMEVNRVYALVADTIARMDSLRG 236 Query: 236 EAIRNIA 242 AI+ +A Sbjct: 237 SAIQRLA 243 >gi|254973936|ref|ZP_05270408.1| flagellar basal body rod protein FlgG [Clostridium difficile QCD-66c26] gi|255091322|ref|ZP_05320800.1| flagellar basal body rod protein FlgG [Clostridium difficile CIP 107932] gi|255312980|ref|ZP_05354563.1| flagellar basal body rod protein FlgG [Clostridium difficile QCD-76w55] gi|255515739|ref|ZP_05383415.1| flagellar basal body rod protein FlgG [Clostridium difficile QCD-97b34] gi|255648833|ref|ZP_05395735.1| flagellar basal body rod protein FlgG [Clostridium difficile QCD-37x79] gi|260682050|ref|YP_003213335.1| flagellar basal body rod protein FlgG [Clostridium difficile CD196] gi|260685648|ref|YP_003216781.1| flagellar basal body rod protein FlgG [Clostridium difficile R20291] gi|260208213|emb|CBA60571.1| putative flagellar basal-body rod protein [Clostridium difficile CD196] gi|260211664|emb|CBE01933.1| putative flagellar basal-body rod protein [Clostridium difficile R20291] Length = 253 Score = 143 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 49/254 (19%), Positives = 99/254 (38%), Gaps = 13/254 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV--------GAIKNDI 52 M T F A A + +L +++N++N+D+ G++ I +++S++V + Sbjct: 1 MYTMFYTSKTALSANQSKLDIISNNIANSDSTGYKKINMEYSDLVDEVLNRPSYPTNGND 60 Query: 53 DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDD 111 + + E G+ T ++ + A++G+ +F + G TR+G F + Sbjct: 61 ISTGTGAKATAPMRIYEQGALAPTDSKSNLAIDGEGFFRVIRKDGTYAYTRNGGFNIDGL 120 Query: 112 GSLVSASGK--YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169 G +V +G D V GE+ K I + LY +Q F Sbjct: 121 GKIVDDNGNILDVQFDAGYNYNNTNIDSTNLTVSRNGELFVDNKKIGKINLYQPIGTQNF 180 Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 + +S + V + +G+ E SN + E +I + F + I Sbjct: 181 ISEGDSLFVATDAAQIKQV-EKVDIVQGYRERSNVSLQEEFVDLIATQRAFQMNSKGIKT 239 Query: 230 NEKSMLEAIRNIAS 243 ++ M + N+ + Sbjct: 240 ADE-MWQIANNLRA 252 >gi|297182937|gb|ADI19086.1| flagellar basal body rod protein [uncultured delta proteobacterium HF0070_15B21] Length = 258 Score = 143 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 61/256 (23%), Positives = 110/256 (42%), Gaps = 28/256 (10%) Query: 9 LAAQLAL-------EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ------- 54 ++ +L E+++ TVA+N++N TVGF+ + F EV+ ++ + Q Sbjct: 1 MSGLTSLVQAGGVLEKKIETVANNLANASTVGFKEDQPSFREVLSTVQRVVPQSDEENFL 60 Query: 55 -----------KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103 S V + + G F TG ELD ALE + +F++ +P+G TR Sbjct: 61 SHEYLDQYVGMDKSAVMVDEIGKNFTTGRFRDTGNELDLALENEGFFSISTPQGERFTRA 120 Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 G FK+ G +V+ G + + I+ + V E G+++ +G V+ + Sbjct: 121 GNFKLDSQGRMVTQDGFPLLGKKGPIQIK---GNGPIQVDENGQVAVEGTVLDQLKTVRF 177 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223 + N +P + V++G LE SN N++ EM +MI T+ + + Sbjct: 178 RNQDQLQKLGNHFYAPIRSDDVPIPSREIVVRQGILEQSNVNTVLEMSRMITATRSYEMV 237 Query: 224 TTLIDENEKSMLEAIR 239 I + +AI Sbjct: 238 QKAITNLDSLDEKAIT 253 >gi|296157455|ref|ZP_06840290.1| flagellar basal-body rod protein FlgF [Burkholderia sp. Ch1-1] gi|295892227|gb|EFG72010.1| flagellar basal-body rod protein FlgF [Burkholderia sp. Ch1-1] Length = 252 Score = 143 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 54/249 (21%), Positives = 97/249 (38%), Gaps = 9/249 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI----DQKI 56 M ++ ++ + VA+N++N T GFR F V + + + Sbjct: 1 MDRLIYTAMSGSTQALEQQAIVANNLANASTTGFRAQLATFRAVPMSFGDGSSINDNTTR 60 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLV 115 +FV S G TG LD A++G W A + G TR G + ++G LV Sbjct: 61 TFVLSSTPGADYTPGPIQQTGNPLDVAIQGPGWLAVQTTDGGEAYTRAGNLHIDENGQLV 120 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRR 172 +A+ + + + V + + I G ++ A + + V+ + R Sbjct: 121 NATNQVVLGNGGPVSVPPGAEITIGKDGTVSALTPGDPPTAVVTVDQLKLVNPDPQTMTR 180 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 + G+ P + VT+ LE SN N + M MI ++F T L++ +K Sbjct: 181 GDDGLFRTGDGNPADADQTVTLAPASLEGSNVNPVSAMVSMITNARQFQMQTKLLESADK 240 Query: 233 SMLEAIRNI 241 + A + Sbjct: 241 NDQSA-NQL 248 >gi|307731362|ref|YP_003908586.1| flagellar basal-body rod protein FlgF [Burkholderia sp. CCGE1003] gi|307585897|gb|ADN59295.1| flagellar basal-body rod protein FlgF [Burkholderia sp. CCGE1003] Length = 252 Score = 143 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 55/249 (22%), Positives = 97/249 (38%), Gaps = 9/249 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI----DQKI 56 M ++ ++ + VA+N++N T GFR F V + + + Sbjct: 1 MDRLIYTAMSGSTQALEQQAIVANNLANASTTGFRAQLATFRAVPMSFGDGSSINDNTTR 60 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLV 115 +FV S G TG LD A+EG W A+++ G TR G + +G LV Sbjct: 61 TFVLSSTPGADYTPGPIQQTGNPLDVAIEGPGWLAVQTADGGEAYTRAGNLHIDQNGQLV 120 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRR 172 +A+ + + + + + + I G ++ A + + V+ + R Sbjct: 121 NATNQVVLGNGGPMAVPPGAQITIGRDGTVTALTPGDPPTAVVTIDQLKLVNPDPQTLTR 180 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 + G+ P E V V LE SN N + M MI ++F T L++ +K Sbjct: 181 GDDGLFRTADGNPAEADPTVAVAPASLEGSNVNPVSAMVAMITNARQFQMQTKLLESADK 240 Query: 233 SMLEAIRNI 241 + A + Sbjct: 241 NDQSA-NQL 248 >gi|149184209|ref|ZP_01862527.1| Flagellar basal-body rod FlgG [Erythrobacter sp. SD-21] gi|148831529|gb|EDL49962.1| Flagellar basal-body rod FlgG [Erythrobacter sp. SD-21] Length = 243 Score = 143 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 43/243 (17%), Positives = 87/243 (35%), Gaps = 20/243 (8%) Query: 19 LSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK-------------ISFVASGKEY 65 + +A+N++N T GF+ + F+ + Q+ + VA Sbjct: 1 MRVIANNLANVGTTGFKRDRANFATLAYQDARVAGQRSSAETAYATGLNLGTGVAVQSTS 60 Query: 66 LSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYPVL 124 G+ +T D AL+GD +F +E P I TR G F ++ +G LV+ G Sbjct: 61 QVMTQGALSTTSNAFDLALDGDGYFQIEMPGGRIGYTRAGNFTLSAEGQLVTQQGYSVQP 120 Query: 125 DMASVPIQIPQKDEIFNVGEKGEISQKGKV-IATMGLYSVDMSQGFVRRENSGISPNIPP 183 + + G + + + G ++ + Sbjct: 121 AITVPEGATAIAVSPDGTVSATLPGEAGPAELGQIQIARFTNPSGLQAIGDNFLVETAAS 180 Query: 184 -----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 P + +++G LE SN N + E+ +MI + + + +I ++ + A Sbjct: 181 GAPELAPGGENGRGNIRQGMLESSNVNIVEELVEMIECQRAYEISSKMISAVDEMLRNAN 240 Query: 239 RNI 241 + + Sbjct: 241 QTL 243 >gi|226939373|ref|YP_002794446.1| FlgF1 [Laribacter hongkongensis HLHK9] gi|226714299|gb|ACO73437.1| FlgF1 [Laribacter hongkongensis HLHK9] Length = 247 Score = 143 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 52/241 (21%), Positives = 92/241 (38%), Gaps = 6/241 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M I + +E + T A+N++N T GF+ F + + D ++ Sbjct: 1 MDKMLYIAMNGAKHVELQQQTTANNLANAHTPGFKAELNAFRAL--PVVGDGTPTRAYSV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G I+TG + DFA+ G WFA++ P+ TR G F + ++G + + G Sbjct: 59 DHTTGHDESQGPMITTGNDQDFAVRGRGWFAVQDPQGNEAYTRAGGFVLDENGIMRTRDG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEK---GEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + V + + + + I G V + V + + G Sbjct: 119 RVIVGEGGPITVPPNSQVMIGEDGTVSAVQTDQIPRTVQVVDRIKLVGGEPRDLFKGEDG 178 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + E GV V G LE SN N + + QMI ++F L+ +++ Sbjct: 179 LFRRRDGQIAEADDGVRVATGMLEGSNVNPVDALTQMISHGRQFEFNVKLMQNADQNARR 238 Query: 237 A 237 A Sbjct: 239 A 239 >gi|126697841|ref|YP_001086738.1| flagellar basal body rod protein FlgG [Clostridium difficile 630] gi|255305297|ref|ZP_05349469.1| flagellar basal body rod protein FlgG [Clostridium difficile ATCC 43255] gi|115249278|emb|CAJ67091.1| Flagellar basal body rod protein FlgG [Clostridium difficile] Length = 253 Score = 143 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 50/254 (19%), Positives = 100/254 (39%), Gaps = 13/254 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV--------GAIKNDI 52 M T F A A + +L +++N++N+D+ G++ I +++S++V + Sbjct: 1 MYTMFYTSKTALSANQSKLDIISNNIANSDSTGYKKINMEYSDLVDEVLNRPSYPTNGND 60 Query: 53 DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDD 111 + + + E G+ T ++ + A++G+ +F + G TR+G F V Sbjct: 61 ISTGTGAKATAPMRNYEQGALAPTDSKSNLAIDGEGFFRVIRKDGTYAYTRNGGFNVDAL 120 Query: 112 GSLVSASGK--YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169 G +V +G D V GE+ K I + LY +Q F Sbjct: 121 GKIVDDNGNILDVQFDAGYNYNNTNIDSTNLTVSRNGELFVDNKKIGKINLYQPIGTQNF 180 Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 + +S + V + +G+ E SN + E +I + F + I Sbjct: 181 ISEGDSLFVATDAAQIKQV-EKVDIVQGYRERSNVSLQEEFVDLIATQRAFQMNSKGIKT 239 Query: 230 NEKSMLEAIRNIAS 243 ++ M + N+ + Sbjct: 240 ADE-MWQIANNLRA 252 >gi|319787120|ref|YP_004146595.1| flagellar basal-body rod protein FlgF [Pseudoxanthomonas suwonensis 11-1] gi|317465632|gb|ADV27364.1| flagellar basal-body rod protein FlgF [Pseudoxanthomonas suwonensis 11-1] Length = 249 Score = 143 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 52/243 (21%), Positives = 91/243 (37%), Gaps = 12/243 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + I + A Q STV+ N++N DT GF+ ++ Sbjct: 1 MDKALYIAMTGARASLQAQSTVSHNLANADTAGFKAALANTEAF--PVRGAGYPSRVAAL 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G+ TG LD +L D W A+++P TR G +T +G LV++ G Sbjct: 59 HVDQGFDASAGALRVTGNPLDVSLHADRWLAVQAPDGSEAYTRAGDLSLTPNGQLVTSGG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM-------SQGFVRR 172 + + + +G+ G +S + V Q R Sbjct: 119 HALLGQDGNPIAL--PPHQALEIGQDGTVSIVPLGEGADTMAMVGRLKVVDARPQQLTRG 176 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 + + P PL+ G + G LE+SN ++ + QMI L ++F +I ++ Sbjct: 177 LDGLMRNTAPQQPLQQAPGTVMTTGALEESNVDAAGALVQMIQLQRQFEMQVKVIKTGDE 236 Query: 233 SML 235 + Sbjct: 237 NAR 239 >gi|325982370|ref|YP_004294772.1| flagellar basal-body rod protein FlgF [Nitrosomonas sp. AL212] gi|325531889|gb|ADZ26610.1| flagellar basal-body rod protein FlgF [Nitrosomonas sp. AL212] Length = 247 Score = 143 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 50/243 (20%), Positives = 95/243 (39%), Gaps = 6/243 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + +TVA N++N T G+R+ F V + D +FV Sbjct: 1 MDRLIYTSMTGANHTLNQQATVAHNLANASTTGYRSETNAFRAV--PLFGDGLPTRAFVV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASG 119 G +TG +LD A+ G W +++ TR+G +V +G L++ +G Sbjct: 59 DSTTGSDFTTGPLETTGRDLDVAIRGPGWISVQLDNGEEAYTRNGSLQVGPNGLLLTQNG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGE---ISQKGKVIATMGLYSVDMSQGFVRRENSG 176 D + + + I G + V + V+ + + + G Sbjct: 119 LKVKGDTGVISVPPETRITIGVDGTVSTVPLNALPNTVAIVGRIKLVNPPEESLVKGADG 178 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + + V + G LE SN N ++EM MI L ++F+ +++ E++ + Sbjct: 179 LFRQKDGKEALVDARVRLIDGTLEGSNVNVVHEMVSMIALARQFDMQMKMLENAERNAQQ 238 Query: 237 AIR 239 A + Sbjct: 239 ASQ 241 >gi|171321839|ref|ZP_02910740.1| flagellar basal-body rod protein FlgF [Burkholderia ambifaria MEX-5] gi|171092877|gb|EDT38129.1| flagellar basal-body rod protein FlgF [Burkholderia ambifaria MEX-5] Length = 252 Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats. Identities = 50/249 (20%), Positives = 89/249 (35%), Gaps = 9/249 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS--- 57 M + + + VA+N++N T GFR + V + + Sbjct: 1 MDRLIYTAMTGASQSLDQQAVVANNLANASTTGFRAQLATYRAVPMNFGDGSTSDPTTTR 60 Query: 58 -FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLV 115 +V + G TG LD A++G W A+++ TR G V ++G LV Sbjct: 61 TYVLASTPGADYAPGPITRTGNPLDVAVQGAGWLAVQTADGSEAYTRAGNLHVDENGQLV 120 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT---MGLYSVDMSQGFVRR 172 +AS + + + + + I G + A + V+ + R Sbjct: 121 NASNLPVIGNGGPISVPPNAEVTIGKDGTVSALMPGDPPTAVAIVDQMKLVNPDPATLAR 180 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 N G+ P + V V LE SN N + M MI + F + LI ++ Sbjct: 181 GNDGLFRTADGNPADSDPSVVVTPNSLEGSNVNPVTAMVAMIDNARAFQLQSKLIQTADQ 240 Query: 233 SMLEAIRNI 241 + ++ + Sbjct: 241 N-EQSANQL 248 >gi|148976395|ref|ZP_01813101.1| polar flagellar FlgF [Vibrionales bacterium SWAT-3] gi|145964218|gb|EDK29474.1| polar flagellar FlgF [Vibrionales bacterium SWAT-3] Length = 249 Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats. Identities = 60/241 (24%), Positives = 101/241 (41%), Gaps = 11/241 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + ++ Q L A+N++N T GFR + + + F Sbjct: 1 MDRALFLAMSGAKQNMQALQLRANNLANVSTTGFRADLAQARSM--QAYGEGMPTRVFSM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + + GS ++TG +LD ++GD W ++ LTR+G KV +G L +ASG Sbjct: 59 TERPGHNFAQGSVVTTGRDLDVTIQGDGWISVMDNTGREGLTRNGNLKVDQNGLLTNASG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172 + VL PI +P +G G IS + L VD +Q + Sbjct: 119 -HLVLGENDAPITLPIPISKVEIGTDGTISVIPQGAPAEELEVVDRIKLVRPDNQSLFKD 177 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 N P E + VT+ +G +E SN N++ EM +I L ++F ++ E+ Sbjct: 178 TNGLFRSKNPEQAYEADAAVTLLKGAVEGSNVNAVGEMTSLIDLQRQFEMQVKMMSTAEE 237 Query: 233 S 233 Sbjct: 238 M 238 >gi|107023952|ref|YP_622279.1| flagellar basal body rod protein FlgF [Burkholderia cenocepacia AU 1054] gi|116691039|ref|YP_836662.1| flagellar basal body rod protein FlgF [Burkholderia cenocepacia HI2424] gi|170734373|ref|YP_001766320.1| flagellar basal body rod protein FlgF [Burkholderia cenocepacia MC0-3] gi|254246966|ref|ZP_04940287.1| Flagellar basal body rod protein [Burkholderia cenocepacia PC184] gi|105894141|gb|ABF77306.1| Flagellar basal-body rod FlgF [Burkholderia cenocepacia AU 1054] gi|116649128|gb|ABK09769.1| flagellar basal-body rod protein FlgF [Burkholderia cenocepacia HI2424] gi|124871742|gb|EAY63458.1| Flagellar basal body rod protein [Burkholderia cenocepacia PC184] gi|169817615|gb|ACA92198.1| flagellar basal-body rod protein FlgF [Burkholderia cenocepacia MC0-3] Length = 252 Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats. Identities = 49/249 (19%), Positives = 89/249 (35%), Gaps = 9/249 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID----QKI 56 M + + + VA+N++N T GFR + V + + Sbjct: 1 MDRLIYTAMTGASQSLDQQAIVANNLANASTTGFRAQLATYRAVPMNFGDGSNIDPTTTR 60 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLV 115 ++V + G TG LD A++G W ++++ TR G V ++G LV Sbjct: 61 TYVLASTPGADYAPGPITRTGNPLDVAVQGPGWLSVQTADGSEAYTRAGNLHVDENGQLV 120 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT---MGLYSVDMSQGFVRR 172 +AS + + + + + I G + A + V+ + R Sbjct: 121 NASNLPVIGNGGPISVPPNAEVTIGKDGTVSALMPGDPPTAVAIVDQMKLVNPDAATLTR 180 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 N G+ P + V V LE SN N + M MI + F + LI ++ Sbjct: 181 GNDGLFRTADGNPADVDPNVVVTPNSLEGSNVNPVTAMVAMIDNARAFQLQSKLIQTADQ 240 Query: 233 SMLEAIRNI 241 + + + Sbjct: 241 N-EQTANQL 248 >gi|315127352|ref|YP_004069355.1| flagellar biosynthesis; cell-proximal portion of basal-body rod [Pseudoalteromonas sp. SM9913] gi|315015866|gb|ADT69204.1| flagellar biosynthesis; cell-proximal portion of basal-body rod [Pseudoalteromonas sp. SM9913] Length = 247 Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats. Identities = 50/241 (20%), Positives = 97/241 (40%), Gaps = 7/241 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M I + Q L+ A+N++N +T GF++ + + + F Sbjct: 1 MDKMVYIAASGAKQSMQGLALKANNLANANTTGFKSDFAQARSM--QAFGEGLPTRVFAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + G + TG LD A+ +AW +++ T+ G +T +G L ++ G Sbjct: 59 QERPGSNMTSGGVVETGRSLDIAMSDNAWLSVQDASGNEAYTKVGSLNITAEGMLTTSDG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS----VDMSQGFVRRENS 175 + + + V + +P + F+ ++ +G + VD + + + N Sbjct: 119 RQVIGEGGPVILPVPIEKIEFSKDGTIQVRPQGAPANFLEEVDRLKVVDANNATLEKGND 178 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 G+ P +E + V V G LE SN N ++EM MI ++F L+ E+ Sbjct: 179 GLFRAKPGQIVETSANVQVLGGTLEKSNVNPVHEMVDMISHQRQFELQVKLMKTAEEIDE 238 Query: 236 E 236 Sbjct: 239 R 239 >gi|217076898|ref|YP_002334614.1| flagellar basal-body rod protein FlgF [Thermosipho africanus TCF52B] gi|217036751|gb|ACJ75273.1| flagellar basal-body rod protein FlgF [Thermosipho africanus TCF52B] Length = 235 Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats. Identities = 47/256 (18%), Positives = 102/256 (39%), Gaps = 38/256 (14%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50 M + LA +L T+++N+SN +T+G++ + F + + Sbjct: 1 MYKGVYLASMGMLADITKLDTLSNNISNAETIGYKADNLAFKTYLEKRLHSFKPMPQEKK 60 Query: 51 ----DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106 DI + V + G+ T LDFA++G +F +E + TR G F Sbjct: 61 VEIKDIGKFEQAVILDEVKTDFSQGNIEHTENMLDFAIDGSGFFVVEKNGEKLYTRAGNF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 K++ DG LV++ G Y + ++ ++ K +I + + +D Sbjct: 121 KISSDGFLVTSEGYYV----------------LDKNDQRIKVFDKSDLINNIKVVDLDNP 164 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 + G + + +G++E SN + + EM +MI + + ++ Sbjct: 165 RKIGYTFYKGQ--------EIEKENFRILQGYVEKSNVDIVKEMVKMIEANRHYEVLSKA 216 Query: 227 IDENEKSMLEAIRNIA 242 + +++ + ++I + Sbjct: 217 VTVHDELLNKSINSAG 232 >gi|168186143|ref|ZP_02620778.1| flagellar basal-body rod protein FlgG [Clostridium botulinum C str. Eklund] gi|169295828|gb|EDS77961.1| flagellar basal-body rod protein FlgG [Clostridium botulinum C str. Eklund] Length = 257 Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats. Identities = 47/256 (18%), Positives = 102/256 (39%), Gaps = 15/256 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S + A ++L+ +++NM+N TVG++ + V+F++++ + Sbjct: 1 MLRSIWNSRSGMSAEMEKLNAISNNMANATTVGYKKVDVQFNDLMQENLDRYGYPVSKGN 60 Query: 56 ----ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTD 110 + V + + G+ + T D A++G +F ++ + TR G F + + Sbjct: 61 PQFTGTGVRTTELERDNAQGNLLQTNKNTDIAIDGHGFFKVQDGKGRTFYTRGGSFNIDN 120 Query: 111 DGSLVSASGKYPVL----DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 G++V G V+ + F + E+G +S A + +Y+ Sbjct: 121 SGTVVDKDGNKLVILNERGENINNPGAGFRTTSFKINEEGYVSGGPNTNARIPIYTSIGD 180 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 ++ P T + V++ +GF E SN + EM +I + F ++ Sbjct: 181 NSMKSIGDNLYVPENANTIVVQNEDVSLLQGFTEQSNVDLGKEMADLIITQRAFQLNSSA 240 Query: 227 IDENEKSMLEAIRNIA 242 + ++ M N+ Sbjct: 241 LKTADE-MWGMANNLR 255 >gi|330830302|ref|YP_004393254.1| flagellar basal-body rod protein FlgF [Aeromonas veronii B565] gi|328805438|gb|AEB50637.1| Flagellar basal-body rod protein FlgF [Aeromonas veronii B565] Length = 248 Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats. Identities = 52/240 (21%), Positives = 100/240 (41%), Gaps = 10/240 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M I ++ L+ +N++N +T GF++ + + + F Sbjct: 1 MDHLLYIAMSGAKETMNSLAVRGNNLANANTTGFKSDFEQARSM--QAFGEGLPSRVFAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119 + + + + G ++TG +LD A++G W A++ P+G TR G +V G+L +++G Sbjct: 59 AERPGQNLQHGMLMTTGRDLDVAVDGPGWIAVQDPKGGEAYTRMGNLQVNATGNLQTSTG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV------DMSQGFVRRE 173 V D PI +P E + G IS + + A + + V + Sbjct: 119 LNVV-DDGGQPIVLPMPMEKLEINRDGTISGRPEGAAANLPEDFQRIKLVNPAADAVEKG 177 Query: 174 NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 G+ + V + G LE SN N + EM +I L ++F + ++ E++ Sbjct: 178 QDGLFRRKDGQNEPASANVGLIAGSLEGSNVNVVDEMTNLIRLQRQFETQVKIMKTAEEN 237 >gi|119469951|ref|ZP_01612756.1| flagellar biosynthesis; cell-proximal portion of basal-body rod [Alteromonadales bacterium TW-7] gi|119446661|gb|EAW27934.1| flagellar biosynthesis; cell-proximal portion of basal-body rod [Alteromonadales bacterium TW-7] Length = 247 Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats. Identities = 47/241 (19%), Positives = 97/241 (40%), Gaps = 7/241 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M I + Q L+ A+N++N +T GF++ + + + F Sbjct: 1 MDKMVYIAASGAKQSLQGLALKANNLANANTTGFKSDFAQARSM--QAFGEGLPSRVFSM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + G + TG +LD A+ +AW +++ T+ G +T +G L+++ G Sbjct: 59 QERPGSNMTSGGIVETGRDLDIAMSDNAWLSVQDASGNEAYTKVGTLNITAEGMLMTSHG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS----VDMSQGFVRRENS 175 + + + V + +P + F+ ++ +G + V+ + + + N Sbjct: 119 RQVIGEGGPVILPVPIEKIEFSEDGAIQVRPQGAPATFLEEVDRLKVVEANSFQLEKGND 178 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 G+ ++ + V V G LE SN N ++EM MI ++F L+ E Sbjct: 179 GLFRPKAGEVVDTSANVKVLSGTLEMSNVNPVHEMVDMISHQRQFELQVKLMKTAEDLDR 238 Query: 236 E 236 Sbjct: 239 S 239 >gi|145298492|ref|YP_001141333.1| flagellar basal body rod protein FlgF [Aeromonas salmonicida subsp. salmonicida A449] gi|142851264|gb|ABO89585.1| flagellar basal body rod protein FlgF [Aeromonas salmonicida subsp. salmonicida A449] Length = 248 Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats. Identities = 52/240 (21%), Positives = 101/240 (42%), Gaps = 10/240 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M I ++ L+ +N++N +TVGF++ + + + F Sbjct: 1 MDHMLYIAMSGAKENMNSLAVRGNNLANANTVGFKSDFEQARSM--QAFGEGLPSRVFAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119 + + + + G ++TG +LD A++G W A++ P+G TR G +++ G+L +++G Sbjct: 59 TERPGQNLQHGMLMTTGRDLDVAVDGQGWIAVQDPKGGEAYTRMGNLQLSATGNLQTSTG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD------MSQGFVRRE 173 V D PI +P E + G IS + + A + V + Sbjct: 119 LNVV-DDGGQPIVLPLPMEKIEINRDGTISGRPEGAAANLPEDFQRIKLVKPAADAVEKG 177 Query: 174 NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 G+ + V + G LE SN N + EM +I L ++F + ++ E++ Sbjct: 178 QDGLFRRKDGQNEAASATVGLIAGSLEGSNVNVVDEMTNLIRLQRQFETQVKIMKTAEEN 237 >gi|163738061|ref|ZP_02145477.1| hypothetical protein RGBS107_06604 [Phaeobacter gallaeciensis BS107] gi|161388677|gb|EDQ13030.1| hypothetical protein RGBS107_06604 [Phaeobacter gallaeciensis BS107] Length = 238 Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats. Identities = 63/241 (26%), Positives = 117/241 (48%), Gaps = 6/241 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + L+ Q L + + VA+N++N+ T G+R V FSE + + + +S Sbjct: 1 MGDTGYTTLSRQSGLMREMRVVANNIANSATTGYRAEGVIFSEFIQSAPGQ--ESLSMGR 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + S G+ +G +LD A+EGD +F +E+P G LTR G F G LV+ G Sbjct: 59 ANIRNTSMAQGALTQSGGDLDLAIEGDGYFMVETPMGERLTRSGAFSTNAQGDLVTMDGH 118 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 LD P+ IP + G G +S G+ + +G++ + + +R + + Sbjct: 119 RV-LDAGRAPVFIPGDAKSIKFGADGTLSADGRALGQIGIFKPEENYQMIREDGVMFRVD 177 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 +ED V +GFLE SN N++ ++ +M+ + + + + ++ ++ + AI+N Sbjct: 178 GE---IEDAGDARVLQGFLEGSNVNAISQLARMVEIQRAYEMGQSFLETEDQRVRNAIKN 234 Query: 241 I 241 + Sbjct: 235 L 235 >gi|222100100|ref|YP_002534668.1| Flagellar basal-body rod protein FlgF [Thermotoga neapolitana DSM 4359] gi|221572490|gb|ACM23302.1| Flagellar basal-body rod protein FlgF [Thermotoga neapolitana DSM 4359] Length = 252 Score = 142 bits (357), Expect = 5e-32, Method: Composition-based stats. Identities = 51/255 (20%), Positives = 96/255 (37%), Gaps = 24/255 (9%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-------------- 48 L +L +A++++N DT G++ + F + Sbjct: 6 RGIYNASMGMLIDMAKLDRIANDLANVDTAGYKQDREAFRAYLRREIFRQEPDPIEKRVE 65 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 K I V + G T A++G+ +F +E TR+G F+V Sbjct: 66 KVPIGPLEYAVVLDEVRSDLSQGPLEETKVPYHLAIDGEGFFRIEFNGQEYFTRNGEFEV 125 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 G +V+ G Y LD I+ + G + G VI +G+Y+V+ Q Sbjct: 126 GSGGYIVTNYGGYL-LDENGERIEYFDGFTVDGEGYV--RDENGNVITRIGVYTVENPQK 182 Query: 169 FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228 F +G +P+ + +G++E SN N++ M MI + + + Sbjct: 183 FGNTLFTGENPS-------PTENFRILQGYVEKSNVNALKAMVDMISAMRHYELSQRAVL 235 Query: 229 ENEKSMLEAIRNIAS 243 N++ + I ++A+ Sbjct: 236 VNDELNGKLINSLAT 250 >gi|1870712|gb|AAB48836.1| FlgF [Sinorhizobium meliloti] Length = 240 Score = 142 bits (357), Expect = 5e-32, Method: Composition-based stats. Identities = 94/230 (40%), Positives = 137/230 (59%), Gaps = 6/230 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 MQT + L++Q+ALE+RL+T+ADN++N++TVGFR +VKF++V+ D Sbjct: 1 MQTGLYVALSSQMALEKRLNTLADNIANSNTVGFRATEVKFNQVL----GDTKPTKVSYV 56 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 S E + TG+ LDFA++GDAWF++++P G LTRDGRF +T+ G LV+ G Sbjct: 57 SEGEEFLSTKTGALRTGSALDFAIKGDAWFSIDTPGGPALTRDGRFTLTETGELVTIKGY 116 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 PVLD PIQ+ VG G I Q G +GLY D S+GF+R +NS + P Sbjct: 117 -PVLDAGGPPIQLNGGAGEIAVGADGAIHQNGVQTCLLGLYEADFSKGFMRYDNSSVMPA 175 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 P + V V +GFLE+SN N + EM Q+I +T+ F+++T L+ Sbjct: 176 AQPNRRDR-FDVGVMQGFLEESNVNGIQEMSQLIMITRAFDNVTALMRAT 224 >gi|299534778|ref|ZP_07048108.1| flagellar basal-body rod protein flgG [Lysinibacillus fusiformis ZC1] gi|298729866|gb|EFI70411.1| flagellar basal-body rod protein flgG [Lysinibacillus fusiformis ZC1] Length = 322 Score = 142 bits (357), Expect = 5e-32, Method: Composition-based stats. Identities = 53/319 (16%), Positives = 95/319 (29%), Gaps = 80/319 (25%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-------- 52 M S G++ + +L + +N++N +T+GF+ +V F +++ + Sbjct: 1 MLRSMYSGISGLKNFQTKLDVIGNNIANVNTIGFKKGRVNFKDLMSQTQAGASAATATRG 60 Query: 53 ----DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP------------- 95 Q GS TG LD +EGD +F + Sbjct: 61 GVNPQQVGLGAQLAAIDTIHGGGSLQGTGRGLDLGIEGDGFFMVADANGAPDPDSGFIDE 120 Query: 96 ---RGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEIS--- 149 + TR+G F + +G LV+A GKY V A I + D+ N S Sbjct: 121 EGFNNTLFTRNGVFYMDSNGYLVNADGKYLVGVSAGDEIVMEADDDGINPENAPIASGDE 180 Query: 150 --------------------------------------------QKGKVIATMGLYSVDM 165 K + + Sbjct: 181 GANLFDDDGVLAPDAGDVGPIRIPTTAKEISIGPNGTIEYVDLNGNRKWAGQLIMAKFPN 240 Query: 166 SQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 + G + + V G +E SN + E +MI + F Sbjct: 241 AGGLAKVGGNYYQQTANSGAAYAQVATVAGMGKVVPGTVEMSNVDLSEEFTEMIVAQRGF 300 Query: 221 NSITTLIDENEKSMLEAIR 239 + T +I +++ + E + Sbjct: 301 QANTRIITTSDEVLQELVN 319 >gi|269103189|ref|ZP_06155886.1| flagellar basal-body rod protein FlgF [Photobacterium damselae subsp. damselae CIP 102761] gi|268163087|gb|EEZ41583.1| flagellar basal-body rod protein FlgF [Photobacterium damselae subsp. damselae CIP 102761] Length = 249 Score = 142 bits (357), Expect = 5e-32, Method: Composition-based stats. Identities = 54/241 (22%), Positives = 93/241 (38%), Gaps = 11/241 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + L A+N++N T GFR + + + F Sbjct: 1 MDRALYLAMNGAQQDMLGLQVRANNLANVSTTGFRADLEQARSM--QAYGEGVPDRVFTM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + + GS I+TG +LD A+EGD W A++ TR G K+ G L +++G Sbjct: 59 AERPGYNFTQGSVITTGRDLDVAVEGDGWLAVQDASGNEAYTRAGHLKIDQTGMLQNSNG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172 + L PI IP +G G IS + + +D + + Sbjct: 119 QLV-LGQNDSPIFIPLPISKIEIGRDGTISVLPQGAPPEAMAQIDRIKLVKTDNHQLFKD 177 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 + P + + + + G LE SN N++ EM +I L + F L+ E+ Sbjct: 178 ADGLFKFKGGQEPQQADASIRLLNGTLEGSNVNAVGEMTALIDLQRHFEMQVKLMKTAEE 237 Query: 233 S 233 Sbjct: 238 M 238 >gi|197335019|ref|YP_002156699.1| flagellar basal-body rod protein FlgF [Vibrio fischeri MJ11] gi|197316509|gb|ACH65956.1| flagellar basal-body rod protein FlgF [Vibrio fischeri MJ11] Length = 249 Score = 142 bits (357), Expect = 5e-32, Method: Composition-based stats. Identities = 55/241 (22%), Positives = 99/241 (41%), Gaps = 11/241 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + ++ Q + ++N++N T GFR + + + F Sbjct: 1 MDRALFLAMSGAKQNMQAMQLRSNNLANVSTTGFRADLEQARSM--QAYGEGLPTRVFNM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + S GS I+TG +LD +EGD W ++ LTR G K+ + G L++ SG Sbjct: 59 TERPGSSFSQGSVITTGRDLDLTIEGDGWISVMDNTGREGLTRAGNLKIDETGLLMNGSG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172 + VL PI +P + + G IS + + VD ++ + Sbjct: 119 -HLVLGENDAPITLPLPIAKIQIAKDGTISVLEQGAPAEAMAEVDRIKLVKTDNRDLFKD 177 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 N P + + +T+ G LE SN N++ EM +I L ++F ++ E+ Sbjct: 178 TNGLFRSKNPGATFDADANITLLSGALEGSNVNAVGEMTNLIDLQRQFEMQVKMMSTAEE 237 Query: 233 S 233 Sbjct: 238 M 238 >gi|160896078|ref|YP_001561660.1| flagellar basal-body rod protein FlgF [Delftia acidovorans SPH-1] gi|160361662|gb|ABX33275.1| flagellar basal-body rod protein FlgF [Delftia acidovorans SPH-1] Length = 246 Score = 142 bits (357), Expect = 5e-32, Method: Composition-based stats. Identities = 55/244 (22%), Positives = 90/244 (36%), Gaps = 5/244 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + A QR S +A N++N T GFR F V ++ F Sbjct: 1 MDRIIYTSMTGANAAAQRQSVLAHNLANAGTNGFRAEMSTFRSV--PLQGSGAGTRVFAL 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119 G TG LD G AWFA++ TR+G F+V+ +G LV+++G Sbjct: 59 EATSGYVDTPGPTQRTGRALDAMAMGRAWFAVQGLDGQEAYTRNGVFEVSPEGQLVNSNG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS--QGFVRRENSGI 177 + + D P+ ++ +G + + R N G+ Sbjct: 119 QAVLSDGGGPIDIPPESTITLGSDGTLTAKTGNQLPVAVGRVKLATPPEDTALVRGNDGL 178 Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 PL + + G +E SN NS+ M MI ++F + L+ E + A Sbjct: 179 FRTGDGDPLPNDENARLLSGAIEGSNVNSVETMVGMIAAARQFETQMRLLQTAETNDKTA 238 Query: 238 IRNI 241 + + Sbjct: 239 SQLL 242 >gi|261253613|ref|ZP_05946186.1| flagellar basal-body rod protein FlgF [Vibrio orientalis CIP 102891] gi|260937004|gb|EEX92993.1| flagellar basal-body rod protein FlgF [Vibrio orientalis CIP 102891] Length = 249 Score = 142 bits (357), Expect = 5e-32, Method: Composition-based stats. Identities = 56/241 (23%), Positives = 98/241 (40%), Gaps = 11/241 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + ++ Q L A+N++N T GFR + + + F Sbjct: 1 MDRALFLAMSGAKQNMQALQLRANNLANVSTTGFRADLAQARSM--QAYGEGVPSRVFSM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASG 119 + + + + GS I+TG +LD ++GD W ++ + LTR+G V +G L++ Sbjct: 59 TERPGHNFQQGSVITTGRDLDVTIQGDGWISVLDQTGKEGLTRNGNLNVDVNG-LLTNGN 117 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172 + VL PI +P +G G IS + + VD +Q + Sbjct: 118 GHLVLGETGAPITLPIPVSKVEIGNDGTISVVPQGAPADAIEVVDRIKLTRTNNQSLFKD 177 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 N P T E + V + G +E SN N++ EM +I L ++F ++ E Sbjct: 178 INGLFRAKDPNTAYEADADVKLLTGAIEGSNVNAIGEMTSLIDLQRQFEMQVKMMSTAED 237 Query: 233 S 233 Sbjct: 238 M 238 >gi|117619148|ref|YP_857342.1| flagellar basal-body rod protein FlgF [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117560555|gb|ABK37503.1| flagellar basal-body rod protein FlgF [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 248 Score = 142 bits (357), Expect = 5e-32, Method: Composition-based stats. Identities = 51/240 (21%), Positives = 103/240 (42%), Gaps = 10/240 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M I ++ L+ ++N++N +T GF++ + + + F Sbjct: 1 MDHLLYIAMSGAKESMNSLAVRSNNLANANTTGFKSDFEQARSM--QAFGEGLPTRVFAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119 + + + + G ++TG +LD A++G W A++ P+G TR G +++ G+L +++G Sbjct: 59 AERPGQNLQHGMLMTTGRDLDVAVDGQGWIAVQDPKGGEAYTRMGNLQLSATGNLQTSTG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV------DMSQGFVRRE 173 V D PI +P E + G IS + + A + + + V + Sbjct: 119 LNVV-DDGGQPIVLPLPMEKIEINRDGTISGRPEGAAANLPENFQRIKLVNPAVDAVEKG 177 Query: 174 NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 G+ + V + G LE SN N + EM +I L ++F + ++ E++ Sbjct: 178 QDGLFRRKDGQNEAASATVGLIAGSLEGSNVNVVDEMTNLIRLQRQFETQVKIMKTAEEN 237 >gi|304392511|ref|ZP_07374451.1| flagellar basal-body rod protein FlgF [Ahrensia sp. R2A130] gi|303295141|gb|EFL89501.1| flagellar basal-body rod protein FlgF [Ahrensia sp. R2A130] Length = 250 Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats. Identities = 80/242 (33%), Positives = 138/242 (57%), Gaps = 2/242 (0%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-KNDIDQKISFVA 60 +T ++ L++QLALE+RL T+ADN++N+ TVGFR V+F+E+ + D Q SF + Sbjct: 7 ETGLSVSLSSQLALERRLGTLADNVANSGTVGFRATHVRFAEIEQRVTGGDESQTTSFAS 66 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 G+ LS G+ + TG LD A++G+ WFAL+ G I+TRDGRF++ +G L S +G Sbjct: 67 RGRSVLSPTAGTLVETGARLDVAIKGEGWFALQGAAGKIMTRDGRFQMDAEGQLRSVNGD 126 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 LD P+ + +G G I Q G+ + +GLY+ D VR SGI Sbjct: 127 EV-LDPGGAPLALNVAAGPPTIGSDGSIVQNGQQVGAIGLYAFDPGTDPVRIGTSGILAQ 185 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 P L D +V +G++E +N + + EM +I + + F+++ ++ +++ ++ + ++ Sbjct: 186 GAPVALVDGDAPSVLQGYVEQANVDPVREMTNLITIHRTFDNVAAMVRKSDAALEKMMQI 245 Query: 241 IA 242 + Sbjct: 246 LG 247 >gi|323136553|ref|ZP_08071634.1| fagellar hook-basal body protein [Methylocystis sp. ATCC 49242] gi|322397870|gb|EFY00391.1| fagellar hook-basal body protein [Methylocystis sp. ATCC 49242] Length = 240 Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats. Identities = 73/242 (30%), Positives = 134/242 (55%), Gaps = 4/242 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M ++F + L++Q+ L++RL+T+A N++N+ T+G+R V F V+ +F + Sbjct: 1 MHSAFYVSLSSQITLDKRLTTIAANVANSSTIGYRATGVSFDTVMSKT---SPYVTNFPS 57 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 +G +Y+S+ G T LD A+ GDAWFA+ +P+G+ TRDGR ++ + G + + G Sbjct: 58 TGVDYISRSSGGLTKTDNPLDVAVIGDAWFAIRTPQGVAYTRDGRMRMMETGDIQTILGY 117 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 PVLD + PI++ + G I+Q + + +GL+ +D + R ENS + P+ Sbjct: 118 -PVLDAGNSPIKLDPTLGPPMIYRDGMITQGDRQVGAIGLFEIDGNATLQRGENSSVIPS 176 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 P P+ + + + +G LE++N N + E+ ++I + F S + D + S A+R Sbjct: 177 TPAIPVTNFTQNGMAQGHLENANVNPVSEITKLIMAHRSFESASASYDMMDNSQRAAVRT 236 Query: 241 IA 242 + Sbjct: 237 LG 238 >gi|253574271|ref|ZP_04851613.1| flagellar basal body rod protein [Paenibacillus sp. oral taxon 786 str. D14] gi|251846748|gb|EES74754.1| flagellar basal body rod protein [Paenibacillus sp. oral taxon 786 str. D14] Length = 300 Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats. Identities = 50/297 (16%), Positives = 105/297 (35%), Gaps = 55/297 (18%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKND------ 51 M + +A ++R TV N++N +T G++++ F E++ ++ D Sbjct: 1 MLRGLYTAASGMIAEQRRHDTVTQNIANLNTPGYKSVNTVARSFPEMLISLMGDKQSGNN 60 Query: 52 --IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA--------------------- 88 I + ++ V + + + G TG DFAL + Sbjct: 61 KQIGKLVTGVFAEESLPAFTQGDLKETGKNTDFALISELSLENPETGGPYAFDASGKFVT 120 Query: 89 ------------WFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQK 136 + ++ + TRDG F V G L +++G + + I Sbjct: 121 EDGEVIYQPQAFFAVEDNEGNVRYTRDGSFTVNAAGELRTSTGFRVLDTGGNPIILDAGL 180 Query: 137 DEIFNVGEKG------EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP----- 185 ++ + + + T+G+ V+ VR N Sbjct: 181 SVDTLTSDEAGNLTAVDNTGALVDLGTLGITVVEQPYQLVREGNGVFRVADEEAAGVREL 240 Query: 186 LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 + G V++G+LE SN ++ M ++ + + S +I ++S+ +A+ I Sbjct: 241 VPGTDGAVVRQGYLEVSNVDTAQSMVDLLAAQRAYESNQKIIQYYDRSLDKAVNEIG 297 >gi|253682153|ref|ZP_04862950.1| flagellar basal body rod protein FlgG [Clostridium botulinum D str. 1873] gi|253561865|gb|EES91317.1| flagellar basal body rod protein FlgG [Clostridium botulinum D str. 1873] Length = 262 Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats. Identities = 49/261 (18%), Positives = 98/261 (37%), Gaps = 20/261 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S + A +L +++NM+N+ TVG++ + VKF++++ + + Sbjct: 1 MLRSIWNSRSGMAAEMDKLDAISNNMANSTTVGYKRVDVKFNDLMQENLDRLGYPVSKGQ 60 Query: 56 ------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKV 108 V S + G+ + T D A++G +F + + TR G F + Sbjct: 61 GKLQVTGGGVKSTEIERDNAQGNLLQTNNNTDLAIDGKGYFKVVDGEGRTLYTRGGSFNI 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQK----DEIFNVGEKGEISQKGKVIATMGLYSVD 164 G++V +G V+ + + E FNV E G + + +Y Sbjct: 121 DPSGTVVDKNGNRLVILNENGIDVNTGRAGFTKESFNVSEDGYLRSDKHRGLRIPIYDTI 180 Query: 165 MSQGFVRRENSGISPNIPPTPLE---DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221 + +P I + ++ +GF E SN + EM +I + F Sbjct: 181 GDNSMKSIGENLYTPLIQGNGRNDVIESKDFSLLQGFTEQSNVDLGKEMTDLIVTQRAFQ 240 Query: 222 SITTLIDENEKSMLEAIRNIA 242 ++ + ++ M N+ Sbjct: 241 LNSSALKTADE-MWGMANNLR 260 >gi|28211323|ref|NP_782267.1| flagellar hook protein flgE [Clostridium tetani E88] gi|28203763|gb|AAO36204.1| flagellar hook protein flgE [Clostridium tetani E88] Length = 365 Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats. Identities = 50/339 (14%), Positives = 96/339 (28%), Gaps = 100/339 (29%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G++ A + +L + +N++N +T F+ +++F +V+ Sbjct: 24 MLRSMFSGISGLKANQTKLDVIGNNIANVNTTAFKNQRIRFQDVLSQNLKFGTGASANVG 83 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI---------- 98 + Q V G+ TG LDFA++GD +F + + Sbjct: 84 GTNPSQVGLGVEVAGIDTVVSQGNMQPTGRNLDFAVDGDGYFVVARGKQEGKIEIEKDDE 143 Query: 99 --------------ILTRDGRFKVTDDGSLVSASGKYP---------------------- 122 TRDG F + D G L+++ G Sbjct: 144 AKKGEVKASDGLEVHYTRDGSFGLDDFGQLLTSDGYRVLGYVPKGTTIKYADGKPVLEVN 203 Query: 123 ----VLDMASVPIQIPQKDEIFNVGEKGEISQKGK------------------------- 153 + V G GK Sbjct: 204 PKEQEGGAKVEENDLKPLAIPDKVIYNGAGKDHGKAMTIKNFSVDKNGAINAVLANNEVV 263 Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTP-------------LEDLSGVTVKRGFLE 200 I +G+ S G + + S + + +G LE Sbjct: 264 TIGQIGMADFKNSAGLYKEGKNLYSGTASSGDAIYRLGTDPTNDKSNEKGYGDIIQGRLE 323 Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + + +MI ++ F + +I ++ + + + Sbjct: 324 MSNVDLAEQFTEMIVASRAFQANGKIITTGDEILQDLVN 362 >gi|240144761|ref|ZP_04743362.1| flagellar basal-body rod protein FlgG [Roseburia intestinalis L1-82] gi|257203282|gb|EEV01567.1| flagellar basal-body rod protein FlgG [Roseburia intestinalis L1-82] gi|291534609|emb|CBL07721.1| fagellar hook-basal body proteins [Roseburia intestinalis M50/1] gi|291540626|emb|CBL13737.1| fagellar hook-basal body proteins [Roseburia intestinalis XB6B4] Length = 264 Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats. Identities = 55/264 (20%), Positives = 106/264 (40%), Gaps = 24/264 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVV---------GAI 48 M + + RL +++N++N DT G++ F++ + + Sbjct: 1 MVKGLYTAYTGMINEQNRLDILSNNLANADTNGYKKEGATNQTFADELAIKIKDTSSYGM 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-----PRGIILTRD 103 + V G+ Y G+F T DFAL+GD +FA+ + +RD Sbjct: 61 PQKLGTMSMGVHIGETYTDYSQGNFRVTDNATDFALDGDGFFAIAYTDKAGNTSVKYSRD 120 Query: 104 GRFKVTDDGSLVSASGKYP-----VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158 G F V G LV+ G Y ++ + + V EKG I Q + + T+ Sbjct: 121 GAFVVNTAGYLVTKDGDYVLNQNGAMNADAGARIQVDPNVPITVDEKGNIFQNNQQVGTI 180 Query: 159 GLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 G+ + + + ++ S V +G +E SN N + EM MI +++ Sbjct: 181 GVVDIADYNYLAKYGENMY--DLVNGGARQASTAKVTQGCIESSNINVVSEMVNMITISR 238 Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242 F + +I+ ++++ +A+ + Sbjct: 239 AFQAGQKVINAVDETLDKAVNQVG 262 >gi|237752809|ref|ZP_04583289.1| flagellar basal-body rod protein flgG [Helicobacter winghamensis ATCC BAA-430] gi|229376298|gb|EEO26389.1| flagellar basal-body rod protein flgG [Helicobacter winghamensis ATCC BAA-430] Length = 277 Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats. Identities = 57/275 (20%), Positives = 110/275 (40%), Gaps = 32/275 (11%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG-------------- 46 MQ + + + RL +A+N++N +T GF+ V + + Sbjct: 1 MQGGYYNSVGGMVTQINRLDVIANNIANANTTGFKRDDVVIGDFMRLYEQHKEFLPIDEQ 60 Query: 47 ---AIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFAL-EGDAWFALESPRGIILTR 102 A + +EY +VG + T DFAL + + +F +E+P GI TR Sbjct: 61 TKDAAQFYNRSLNRVPQIVEEYTDNKVGGMMITDNTFDFALSKENMYFMVETPDGIRYTR 120 Query: 103 DGRFKVTDDGSLVSASGKYPVLDMA-----------SVPIQIPQKDEIFNVGEKGEISQK 151 DG F + + G LV+ G + +++ I+ E + Sbjct: 121 DGSFVLNEQGRLVTKEGYPVLPREYLDAPQYIEFIDGFQVEVDSNGNIYTRDLNNEGISE 180 Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL--SGVTVKRGFLEDSNANSMYE 209 ++A +G+ S + + + ++ S T + V++GFLE SN N + E Sbjct: 181 MALMANIGVVSFENPKYLKKIGDNLYSYPQERTDEREALERSGAVRQGFLEKSNINVVQE 240 Query: 210 MGQMIHLTQKFNSITTLIDEN-EKSMLEAIRNIAS 243 M +I + + + ++ + ++ EAI +A+ Sbjct: 241 MTGLIETNRLVEAYSKVLKTHMDELNTEAITKLAA 275 >gi|187925760|ref|YP_001897402.1| flagellar basal body rod protein FlgF [Burkholderia phytofirmans PsJN] gi|187716954|gb|ACD18178.1| flagellar basal-body rod protein FlgF [Burkholderia phytofirmans PsJN] Length = 252 Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats. Identities = 54/249 (21%), Positives = 98/249 (39%), Gaps = 9/249 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI----DQKI 56 M ++ ++ + VA+N++N T GFR F V + + + Sbjct: 1 MDRLIYTAMSGSTQALEQQAIVANNLANASTTGFRAQLATFRAVPMSFGDGSSINDNTTR 60 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLV 115 +FV S G TG LD A++G W A+++ G TR G V ++G LV Sbjct: 61 TFVLSSTPGADYTPGPIQQTGNPLDVAIQGPGWLAVQTADGGEAYTRAGNLHVDENGQLV 120 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRR 172 +A+ + + + V + + I G ++ A + + V+ + R Sbjct: 121 NATNQVVLGNGGPVSVPPGAEITIGKDGTVSALTPGDPPTAVVTVDQLKLVNPDPQTMTR 180 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 + G+ + VT+ LE SN N + M MI ++F T L++ +K Sbjct: 181 GDDGLFRTADGNAADADPAVTLAPASLEGSNVNPVSAMVSMITNARQFQMQTKLLESADK 240 Query: 233 SMLEAIRNI 241 + A + Sbjct: 241 NDQSA-NQL 248 >gi|296103610|ref|YP_003613756.1| Flagellar basal-body rod protein FlgF [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058069|gb|ADF62807.1| Flagellar basal-body rod protein FlgF [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 245 Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats. Identities = 50/246 (20%), Positives = 91/246 (36%), Gaps = 10/246 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + ++A A R + ++N++N+ T GFR F V I+ + + + VA Sbjct: 1 MDRAIYTAMSAANAALNRQAVTSNNLANSSTAGFRAQLAAFRSV--PIEGETLRTRALVA 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASG 119 + +G TG LD AL D W A+ TR+G +V DG V + Sbjct: 59 ESTPFHDTTMGPITHTGRSLDVALPQDGWLAVALDDGSEGYTRNGAIEVDQDG--VLSVN 116 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEK----GEISQKGKVIATMGLYSVDMSQGFVRRENS 175 P++ PQ G ++ L V+ + + Sbjct: 117 GRPLMGDGGPLEVPPQSHVTIGSDGTVSALGMGDDPTMLVPVGRLKLVNADMNSLVHGDD 176 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 G+ L + + +E SN + + M QMI ++ F+ +I +++ Sbjct: 177 GLFRTAGGEMLAQDETLRLTPEAIEGSNVSPVQAMTQMIANSRGFDMNMKVIRTADENAQ 236 Query: 236 EAIRNI 241 +A + Sbjct: 237 KA-NQL 241 >gi|289208115|ref|YP_003460181.1| flagellar basal-body rod protein FlgF [Thioalkalivibrio sp. K90mix] gi|288943746|gb|ADC71445.1| flagellar basal-body rod protein FlgF [Thioalkalivibrio sp. K90mix] Length = 246 Score = 141 bits (356), Expect = 7e-32, Method: Composition-based stats. Identities = 54/246 (21%), Positives = 91/246 (36%), Gaps = 6/246 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M I ++ S N++N +T GFR + V ++ + + Sbjct: 1 MDRFLYIAMSGAKETMHAQSVNNHNLANANTDGFRQALANANTV--PVRGPVFDSRDYAQ 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 G + G STG +LD A+E + A++ P TR G V G L +A G Sbjct: 59 LGTDGTDFSKGQMQSTGRDLDIAIEDQGFIAVQGPDGEEGYTRAGSLHVDAFGLLRTAQG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQ---KGKVIATMGLYSVDMSQGFVRRENSG 176 + D + I +K EI G Q + A + V+ + R + G Sbjct: 119 HQVLGDGGPIAIPPSEKIEIGTDGTISVRPQGVGPEALAAIERIRLVNPDVNELERGDDG 178 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + + V V G LE SN N++ + +MI L++ F ++D Sbjct: 179 LFRMADGGEAPPDAEVRVVSGMLEGSNVNTVEALTRMIELSRHFEMQVKMMDSANTLEQS 238 Query: 237 AIRNIA 242 + R + Sbjct: 239 SNRLLG 244 >gi|148258452|ref|YP_001243037.1| putative flagellar basal-body rod protein flgF [Bradyrhizobium sp. BTAi1] gi|146410625|gb|ABQ39131.1| putative flagellar basal-body rod protein flgF [Bradyrhizobium sp. BTAi1] Length = 246 Score = 141 bits (356), Expect = 7e-32, Method: Composition-based stats. Identities = 62/240 (25%), Positives = 110/240 (45%), Gaps = 14/240 (5%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA-----IKNDIDQKISFVAS 61 I L+ +AL++RL A+N++N+ T G+R ++ F E + I ++ +S V + Sbjct: 8 ISLSRLMALQRRLDVAANNVANSQTTGYRAKQLAFQEYLKPDKPPEIGEKPERPLSLVDA 67 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 + S G+F STG LD A+ G+A+FA+++ +G TRDG F + G LV+ G Sbjct: 68 ALPFTSSASGAFRSTGNPLDLAINGNAYFAIQTSQGERYTRDGSFSLDAKGRLVTLEGLP 127 Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 + D I +P + + G +S + + + L S D + + Sbjct: 128 VLGD--KGVITVPPRAGEITIDPSGRVSMQQVELGKLKLVSFDPGARLEAAGGNLLRSAQ 185 Query: 182 PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 P P + TV + LE SN EM ++ L + + + L+ +++ I I Sbjct: 186 P--PKANAGSATVLQAMLEQSNVQPTIEMSRLAELNRSYEVASKLLKDSQD-----INEI 238 >gi|331269339|ref|YP_004395831.1| flagellar basal-body rod protein FlgG [Clostridium botulinum BKT015925] gi|329125889|gb|AEB75834.1| flagellar basal-body rod protein FlgG [Clostridium botulinum BKT015925] Length = 262 Score = 141 bits (355), Expect = 7e-32, Method: Composition-based stats. Identities = 47/267 (17%), Positives = 99/267 (37%), Gaps = 32/267 (11%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S + A +L +++NM+N+ TVG++ + VKF++++ + + Sbjct: 1 MLRSIWNSRSGMAAEMDKLDAISNNMANSTTVGYKRVDVKFNDLMQENLDRLGYPVSKGQ 60 Query: 56 ------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKV 108 S V S + G+ + T D A++G +F + TR G F + Sbjct: 61 GKRQVTGSGVKSTELERDNAQGNLLQTNNNTDLAIDGKGYFKVVDGTGRTFYTRGGSFNI 120 Query: 109 TDDGSLVSASGKYPVLDMAS-------------VPIQIPQKDEIFNVGEKGEISQKGKVI 155 G++V +G V+ + ++ + I++ +G I Sbjct: 121 DPSGTVVDKNGNKLVILNENGTDVNKTGAGFTKDSFKVSEDGYIWSDKHRGFRIPIYDTI 180 Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIH 215 + S+ + G N + + ++ +GF E SN + EM +I Sbjct: 181 GDNSMKSIG--ENLYVPLTQGNGRND----VIESKDFSLLQGFTEQSNVDLGKEMSDLII 234 Query: 216 LTQKFNSITTLIDENEKSMLEAIRNIA 242 + F ++ + ++ M N+ Sbjct: 235 TQRAFQLNSSALKTADE-MWGMANNLR 260 >gi|313200562|ref|YP_004039220.1| flagellar basal-body rod protein flgf [Methylovorus sp. MP688] gi|312439878|gb|ADQ83984.1| flagellar basal-body rod protein FlgF [Methylovorus sp. MP688] Length = 246 Score = 141 bits (355), Expect = 7e-32, Method: Composition-based stats. Identities = 55/243 (22%), Positives = 101/243 (41%), Gaps = 6/243 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M ++ + ++ +T A N++N + GF+ F V I ++ +FV Sbjct: 1 MDRMIYTAMSGAKHILEQQATTAHNLANATSTGFKAQVDSFRAV--PIVSEGLPTRAFVI 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119 G+ I T +LD A++G W A++ TR+G KV ++G L +A G Sbjct: 59 DTTVATDFTPGTIIGTSRDLDIAIQGRGWIAVQRLDGSEAYTRNGSLKVNENGILQTADG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176 + D + I ++ I G +S+ T + V+ + + R G Sbjct: 119 LTVLGDGGPITIPPDERIAIGKDGTVSTVSRVTVPSPTNIVGRIKLVNPDESTLVRGTDG 178 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + P + + + V G LE SN N + M MI L ++F + L++ E + + Sbjct: 179 LFSTQNGQPAQADANIQVASGALEGSNVNVVDAMVNMISLARQFETQMKLLENAENNANK 238 Query: 237 AIR 239 A + Sbjct: 239 ASQ 241 >gi|115353117|ref|YP_774956.1| flagellar basal body rod protein FlgF [Burkholderia ambifaria AMMD] gi|170703097|ref|ZP_02893917.1| flagellar basal-body rod protein FlgF [Burkholderia ambifaria IOP40-10] gi|115283105|gb|ABI88622.1| flagellar basal-body rod protein FlgF [Burkholderia ambifaria AMMD] gi|170131994|gb|EDT00502.1| flagellar basal-body rod protein FlgF [Burkholderia ambifaria IOP40-10] Length = 252 Score = 141 bits (355), Expect = 7e-32, Method: Composition-based stats. Identities = 50/249 (20%), Positives = 89/249 (35%), Gaps = 9/249 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS--- 57 M + + + VA+N++N T GFR + V + + Sbjct: 1 MDRLIYTAMTGASQSLDQQAIVANNLANASTTGFRAQLATYRAVPMNFGDGSTSDPTTTR 60 Query: 58 -FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLV 115 +V + G TG LD A++G W A+++ TR G V ++G LV Sbjct: 61 TYVLASTPGADYAPGPITRTGNPLDVAVQGAGWLAVQTADGSEAYTRAGNLHVDENGQLV 120 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT---MGLYSVDMSQGFVRR 172 +AS + + + + + I G + A + V+ + R Sbjct: 121 NASNLPVIGNGGPISVPPNAEVTIGKDGTVSALMPGDPPTAVAIVDQMKLVNPDPATLAR 180 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 N G+ P + V V LE SN N + M MI + F + LI ++ Sbjct: 181 GNDGLFRTADGNPADSDPSVVVTPNSLEGSNVNPVTAMVAMIDNARAFQLQSKLIQTADQ 240 Query: 233 SMLEAIRNI 241 + ++ + Sbjct: 241 N-EQSANQL 248 >gi|325529015|gb|EGD06028.1| flagellar basal body rod protein FlgF [Burkholderia sp. TJI49] Length = 252 Score = 141 bits (355), Expect = 7e-32, Method: Composition-based stats. Identities = 51/249 (20%), Positives = 89/249 (35%), Gaps = 9/249 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----DIDQKI 56 M + + + VA+N++N T GFR + V + D Sbjct: 1 MDRLIYTAMTGASQSLDQQAIVANNLANASTTGFRAQLATYRAVPMNFGDGSTVDPTTTR 60 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLV 115 ++V + G TG LD A++G W +++ + TR G V +G LV Sbjct: 61 TYVLASTPGADFAPGPITRTGNPLDVAVQGAGWLSVQLADGSEAYTRAGNLHVDQNGQLV 120 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT---MGLYSVDMSQGFVRR 172 +AS V + + + + I G + A + V+ + R Sbjct: 121 NASNLPVVGNGGPISVPPNAEVTIGKDGTVSALMPGDPPTAVAIVDQMKLVNPDPATLTR 180 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 N G+ P + V V LE SN N + M MI + F + LI ++ Sbjct: 181 GNDGLFRTADGNPADADPNVVVTPNSLEGSNVNPVTAMVAMIDNARAFQLQSKLIQTADQ 240 Query: 233 SMLEAIRNI 241 + ++ + Sbjct: 241 N-EQSANQL 248 >gi|253998487|ref|YP_003050550.1| flagellar basal-body rod protein FlgF [Methylovorus sp. SIP3-4] gi|253985166|gb|ACT50023.1| flagellar basal-body rod protein FlgF [Methylovorus sp. SIP3-4] Length = 246 Score = 141 bits (355), Expect = 8e-32, Method: Composition-based stats. Identities = 55/243 (22%), Positives = 101/243 (41%), Gaps = 6/243 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M ++ + ++ +T A N++N + GF+ F V I ++ +FV Sbjct: 1 MDRMIYTAMSGAKHILEQQATTAHNLANATSTGFKAQVDSFRAV--PIVSEGLPTRAFVI 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119 G+ I T +LD A++G W A++ TR+G KV ++G L +A G Sbjct: 59 DTTVATDFTPGTIIGTSRDLDIAIQGRGWIAVQRLDGSEAYTRNGSLKVNENGILQTADG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176 + D + I ++ I G +S+ T + V+ + + R G Sbjct: 119 LTVLGDGGPITIPPDERIAIGRDGTVSTVSRVTVPSPTNIVGRIKLVNPDESTLVRGTDG 178 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + P + + + V G LE SN N + M MI L ++F + L++ E + + Sbjct: 179 LFSTQNGQPAQADANIQVASGALEGSNVNVVDAMVNMISLARQFETQMKLLENAENNANK 238 Query: 237 AIR 239 A + Sbjct: 239 ASQ 241 >gi|163742543|ref|ZP_02149929.1| flagellar basal-body rod protein FlgF [Phaeobacter gallaeciensis 2.10] gi|161384128|gb|EDQ08511.1| flagellar basal-body rod protein FlgF [Phaeobacter gallaeciensis 2.10] Length = 238 Score = 141 bits (355), Expect = 8e-32, Method: Composition-based stats. Identities = 62/241 (25%), Positives = 117/241 (48%), Gaps = 6/241 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + L+ Q L + + VA+N++N+ T G+R + FSE + + + +S Sbjct: 1 MGDTGYTTLSRQSGLMREMRVVANNIANSATTGYRAEGIIFSEFIQSAPGQ--ESLSMGR 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + S G+ +G +LD A+EGD +F +E+P G LTR G F G LV+ G Sbjct: 59 ANIRNTSMAQGALTQSGGDLDLAIEGDGYFMVETPMGERLTRSGAFSTNAQGDLVTMDGH 118 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 LD P+ IP + G G +S G+ + +G++ + + +R + + Sbjct: 119 RV-LDAGRAPVFIPGDAKSIKFGADGTLSADGRALGQIGIFKPEENYQMIREDGVMFRVD 177 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 +ED V +GFLE SN N++ ++ +M+ + + + + ++ ++ + AI+N Sbjct: 178 GE---IEDAGDARVLQGFLEGSNVNAISQLARMVEIQRAYEMGQSFLETEDQRVRNAIKN 234 Query: 241 I 241 + Sbjct: 235 L 235 >gi|84388092|ref|ZP_00990988.1| polar flagellar FlgF [Vibrio splendidus 12B01] gi|84377159|gb|EAP94029.1| polar flagellar FlgF [Vibrio splendidus 12B01] Length = 249 Score = 141 bits (355), Expect = 8e-32, Method: Composition-based stats. Identities = 60/241 (24%), Positives = 101/241 (41%), Gaps = 11/241 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + ++ Q L A+N++N T GFR + + + F Sbjct: 1 MDRALFLAMSGAKQNMQALQLRANNLANVSTTGFRADLAQARSM--QAYGEGMPTRVFSM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + + GS ++TG +LD ++GD W ++ LTR+G KV +G L +ASG Sbjct: 59 TERPGHNFAQGSVVTTGRDLDVTIQGDGWISVMDNTGREGLTRNGNLKVDQNGLLTNASG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172 + VL PI +P +G G IS + L VD +Q + Sbjct: 119 -HLVLGENDAPITLPIPISKVEIGTDGTISVIPQGAPAEELAIVDRIKLVRPDNQSLFKD 177 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 N P E + VT+ +G +E SN N++ EM +I L ++F ++ E+ Sbjct: 178 TNGLFRSKNPDQAYEADAAVTLLKGAIEGSNVNAVGEMTSLIDLQRQFEMQVKMMSTAEE 237 Query: 233 S 233 Sbjct: 238 M 238 >gi|86146154|ref|ZP_01064480.1| polar flagellar FlgF [Vibrio sp. MED222] gi|218708805|ref|YP_002416426.1| flagellar basal body rod protein FlgF [Vibrio splendidus LGP32] gi|85836101|gb|EAQ54233.1| polar flagellar FlgF [Vibrio sp. MED222] gi|218321824|emb|CAV17794.1| Flagellar basal-body rod protein flgF [Vibrio splendidus LGP32] Length = 249 Score = 141 bits (355), Expect = 8e-32, Method: Composition-based stats. Identities = 58/241 (24%), Positives = 101/241 (41%), Gaps = 11/241 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + ++ Q L ++N++N T GFR + + + F Sbjct: 1 MDRALFLAMSGAKQNMQALQLRSNNLANVSTTGFRADLAQARSM--QAYGEGMPTRVFSM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + + GS ++TG +LD ++GD W ++ LTR+G +V +G L +ASG Sbjct: 59 TERPGHNFAQGSVVTTGRDLDVTIQGDGWISVMDNTGREGLTRNGNLRVDQNGLLTNASG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172 + VL PI +P +G G IS + L VD +Q + Sbjct: 119 -HLVLGENDAPITLPIPISKVEIGTDGTISVIPQGAPAEELAVVDRIKLVRPDNQSLFKD 177 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 N P E + VT+ +G +E SN N++ EM +I L ++F ++ E+ Sbjct: 178 TNGLFRSKNPDQAYEADAAVTLLKGAIEGSNVNAVGEMTSLIDLQRQFEMQVKMMSTAEE 237 Query: 233 S 233 Sbjct: 238 M 238 >gi|51246532|ref|YP_066416.1| flagellar basal-body rod protein (FlgF) [Desulfotalea psychrophila LSv54] gi|50877569|emb|CAG37409.1| related to flagellar basal-body rod protein (FlgF) [Desulfotalea psychrophila LSv54] Length = 248 Score = 141 bits (354), Expect = 9e-32, Method: Composition-based stats. Identities = 51/248 (20%), Positives = 102/248 (41%), Gaps = 7/248 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + L+ L+ +Q +ST+++N++N +T GF+ + F ++ + + + I++ Sbjct: 1 MVSGKYSALSGALSRQQAISTISNNLANVNTTGFKKNTLSFESILNNQQQNSAEGINYSR 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 GK + G+F T +D A++G A+F ++ G + TR G F + D L + G Sbjct: 61 VGKSSTDFKQGTFKPTENPMDLAIQGKAFFKVQGVNGALYTRRGDFGLRGDNVLTTRHGL 120 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-----IATMGLYSVDMSQGFVRRENS 175 + + + GE G I GK + +GL+ +D ++ Sbjct: 121 PILSEAGGEITIPDAETSKIAFGEDGTIYILGKQGRREEVGKIGLFEIDDPS-LLKNAGD 179 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 ++ +G LE +N N + M Q+I + F ++ I Sbjct: 180 TSFSLEQGGQETISQESSLLQGNLEVANVNMVAAMAQLIDNQRAFETLNKAIKSYSTISD 239 Query: 236 EAIRNIAS 243 + + S Sbjct: 240 QQ-DKLGS 246 >gi|59712480|ref|YP_205256.1| flagellar basal body rod protein FlgF [Vibrio fischeri ES114] gi|24459278|gb|AAL86631.1| FlgF [Vibrio fischeri ES114] gi|59480581|gb|AAW86368.1| flagellar proximal rod protein FlgF [Vibrio fischeri ES114] Length = 249 Score = 141 bits (354), Expect = 9e-32, Method: Composition-based stats. Identities = 55/241 (22%), Positives = 99/241 (41%), Gaps = 11/241 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + ++ Q + ++N++N T GFR + + + F Sbjct: 1 MDRALFLAMSGAKQNMQAMQLRSNNLANVSTTGFRADLEQARSM--QAYGEGLPTRVFNM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + S GS I+TG +LD +EGD W ++ LTR G K+ + G L++ SG Sbjct: 59 TERPGSSFSQGSVITTGRDLDLTVEGDGWISVMDNTGREGLTRAGNLKIDETGLLMNGSG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172 + VL PI +P + + G IS + + VD ++ + Sbjct: 119 -HVVLGENDAPITLPLPIAKIQIAKDGTISVLEQGAPAEAMAEVDRIKLVKTDNRDLFKD 177 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 N P + + +T+ G LE SN N++ EM +I L ++F ++ E+ Sbjct: 178 TNGLFRSKNPGATFDADANITLLSGALEGSNVNAVGEMTNLIDLQRQFEMQVKMMSTAEE 237 Query: 233 S 233 Sbjct: 238 M 238 >gi|23092316|gb|AAN08641.1| FlgF [Aeromonas hydrophila] Length = 248 Score = 141 bits (354), Expect = 9e-32, Method: Composition-based stats. Identities = 51/240 (21%), Positives = 101/240 (42%), Gaps = 10/240 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M I ++ L+ +N++N +T+GF++ + + + F Sbjct: 1 MDHLLYIAMSGAKENMNSLAVRGNNLANANTIGFKSDFEQARSM--QAFGEGLPSRVFAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119 + + + + G ++TG +LD A++G W A++ P+G TR G +++ G+L +++G Sbjct: 59 TERPGQNLQHGMLMTTGRDLDVAVDGQGWIAVQDPKGGEAYTRMGNLQLSATGNLQTSTG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD------MSQGFVRRE 173 V D PI +P E + G IS + + A + V + Sbjct: 119 LNVV-DDGGQPIVLPLPMEKIEINRDGTISGRPEGAAANLPEDFQRIQLVKPAADAVEKG 177 Query: 174 NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 G+ + V + G LE SN N + EM +I L ++F + ++ E++ Sbjct: 178 QDGLFRRKDGQTEAASANVGLIAGSLEGSNVNVVDEMTNLIRLQRQFETQVKIMKTAEEN 237 >gi|260774939|ref|ZP_05883840.1| flagellar basal-body rod protein FlgF [Vibrio coralliilyticus ATCC BAA-450] gi|260609194|gb|EEX35352.1| flagellar basal-body rod protein FlgF [Vibrio coralliilyticus ATCC BAA-450] Length = 249 Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 58/241 (24%), Positives = 96/241 (39%), Gaps = 11/241 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + ++ Q + A+N++N T GFR + + D F Sbjct: 1 MDRALFLAMSGAKQNMQAMQLRANNLANVSTTGFRADLAQARSM--QAYGDGMPSRVFSM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + + + GS I+TG +LD ++ W ++ LTR+G KV +G L + +G Sbjct: 59 TERPGHNFQQGSVITTGRDLDVTIQDQGWISVLDNTGKEGLTRNGNMKVDVNGMLTTGNG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172 L PI IP VG G IS + + VD +Q + Sbjct: 119 NLV-LGETGAPITIPIPISKIEVGTDGTISVVPQGAPADAIEIVDRIKLTSTNNQSLYKD 177 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 N P E +GV + G LE SN N++ EM +I L ++F ++ E+ Sbjct: 178 VNGLFRSKDPNAAYEMDAGVKLLTGALEGSNVNAIGEMTNLIDLQRQFEMQVKMMSTAEE 237 Query: 233 S 233 Sbjct: 238 M 238 >gi|325288806|ref|YP_004264987.1| fagellar hook-basal body protein [Syntrophobotulus glycolicus DSM 8271] gi|324964207|gb|ADY54986.1| fagellar hook-basal body protein [Syntrophobotulus glycolicus DSM 8271] Length = 257 Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 51/258 (19%), Positives = 96/258 (37%), Gaps = 20/258 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTI---KVKFSEVVGAIKND------ 51 M A LA Q+ T+ N+ N T G+R F ++ Sbjct: 1 MIRGLYTAAAGMLANNQQSDTIDQNIENLKTPGYRQASEKLQAFPAMLVERMEPSSTEPV 60 Query: 52 ------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGR 105 I + V G TG + D A+ +FA+ +P G TR G Sbjct: 61 VMERTPIGSLGTGVQIESVMYQDGPGMLRETGNQTDVAITARGYFAVSTPDGERYTRSGH 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 F + G L + SG + + E F + E G + K + L VD+ Sbjct: 121 FLLDSAGGLRTPSGCPVL----GQNGPVGPIPENFEIREDGTMINKEDNMEVDRLRLVDI 176 Query: 166 S-QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224 + R ++ + + V +K+G++E+SN N ++ +M+ + + +++ Sbjct: 177 PTEALQREGDTLLFSSSEGVVDIPAGEVRLKQGYVEESNVNLNAQIVKMLEVVRSYSANQ 236 Query: 225 TLIDENEKSMLEAIRNIA 242 ++ N+ + +A+ I Sbjct: 237 KVVQTNDSLLQKAVNEIG 254 >gi|284041521|ref|YP_003391861.1| fagellar hook-basal body protein [Conexibacter woesei DSM 14684] gi|283945742|gb|ADB48486.1| fagellar hook-basal body protein [Conexibacter woesei DSM 14684] Length = 293 Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 45/290 (15%), Positives = 90/290 (31%), Gaps = 51/290 (17%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M ++ + L A++++N +TV +++ + F + + ++ Sbjct: 1 MMRGMFSAISGLKVNQTMLDVTANDLANVNTVAYKSSRTTFQDSLAQLQRGAAGPGNGTG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII------LTR 102 Q V G G+ +TG+ LD +EG WF + + TR Sbjct: 61 GSNALQIGLGVKLGSVDNIMTEGAPQTTGSPLDVYIEGSGWFRVANGTPPAVPTAFQWTR 120 Query: 103 DGRFKVTDDGSLVSASGKYPVL-------DMASVPIQIPQKDEIFNVGEKG--------- 146 G F G L++++G+Y V D P + + G Sbjct: 121 AGNFTTNSQGHLITSTGQYVVGRGATATPDGRGGFTYAPNATDSYIQIPPGSTDVSISPD 180 Query: 147 ------------EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED-----L 189 ++ + L G R S S + Sbjct: 181 GGVSYVDRNRASPTFERRVTAGYIALGKFANEAGLQRNGGSTWSESAASGAATVDTPGVG 240 Query: 190 SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G LE SN + + MI + F + + +I +++ + + + Sbjct: 241 GNGRTLAGMLEMSNVDLATQFTTMITAQRGFQANSRVISTSDEMLQDLVN 290 >gi|260767768|ref|ZP_05876703.1| flagellar basal-body rod protein FlgF [Vibrio furnissii CIP 102972] gi|260617277|gb|EEX42461.1| flagellar basal-body rod protein FlgF [Vibrio furnissii CIP 102972] gi|315179400|gb|ADT86314.1| flagellar basal body rod protein FlgF [Vibrio furnissii NCTC 11218] Length = 249 Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 56/241 (23%), Positives = 101/241 (41%), Gaps = 11/241 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + ++ Q + A+N++N T GFR + + D F Sbjct: 1 MDRALFLAMSGAKQNMQAMQLRANNLANVSTTGFRADLEQARSM--QAYGDGLPSRVFSM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119 + + + + GS I+TG +LD ++GD W A ++ LTR+G + +G L++ +G Sbjct: 59 TERPGHNFQQGSVITTGRDLDVTVQGDGWIAVMDKTGKEGLTRNGNLNIDANGLLLNGNG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172 +PVL PI +P +G G IS + + + VD +Q + Sbjct: 119 -HPVLGETGAPITLPVPLAKVEIGNDGTISVRPQGAPADAMEVVDRIKLVRLDNQSLFKD 177 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 N P + + V + G +E SN N++ EM +I L ++F ++ E Sbjct: 178 VNGLFRSKDPNAAYDANANVKILTGAVEGSNVNAVGEMTSLIDLQRQFEMQVKMMSTAED 237 Query: 233 S 233 Sbjct: 238 M 238 >gi|332305616|ref|YP_004433467.1| flagellar basal-body rod protein FlgF [Glaciecola agarilytica 4H-3-7+YE-5] gi|332172945|gb|AEE22199.1| flagellar basal-body rod protein FlgF [Glaciecola agarilytica 4H-3-7+YE-5] Length = 247 Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 52/246 (21%), Positives = 92/246 (37%), Gaps = 8/246 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M I + + A+N++NT T GFR + + D F Sbjct: 1 MDKLLYIAASGAKQDLLGTAVRANNLANTQTTGFRAQLEQARSM--PAFGDGLPTRVFSM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASG 119 + + E G+ I T LD A++G+ W ++ ++ +R+G +++ DG L +SG Sbjct: 59 TENPANNFEGGAMIQTERNLDVAIQGEGWLSVLDANGAEAYSRNGSLQISADGQLQDSSG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 V + V + IP + + +G + V+ V R N Sbjct: 119 NSIVGEFGPVFLPIPLSNINIAGDGTISVRPQGAPETVLEEVGRLKLVNPDLDNVERGND 178 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 G+ + V+++ G LE SN N + EM MI L + + + E Sbjct: 179 GLFRQKDGELAQFDPTVSIRNGMLEGSNVNPVEEMVDMISLQRHYEMQVKFMKEASDLDS 238 Query: 236 EAIRNI 241 A + Sbjct: 239 RA-NQL 243 >gi|297538897|ref|YP_003674666.1| flagellar basal-body rod protein FlgF [Methylotenera sp. 301] gi|297258244|gb|ADI30089.1| flagellar basal-body rod protein FlgF [Methylotenera sp. 301] Length = 246 Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 55/245 (22%), Positives = 101/245 (41%), Gaps = 6/245 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + ++ +T A N++N + GF+ F V + ++ +FV Sbjct: 1 MDRMIYTAMTGAKHILEQQATTAHNLANVTSTGFKAQVDSFRAV--PVISEGLATRAFVV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 G+ ST +LD A++G W +++ TR+G KV+++G L +A+G Sbjct: 59 DSTVGADFNPGAIQSTNRDLDVAIQGKGWLSIQRADGSEGYTRNGSLKVSENGILQTATG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176 + D + I + G ++ K A+ L V+ + + R G Sbjct: 119 LTVLGDGGPISIPPDVAVSVGKDGTVSTVANGAKPGASNVLGRLKLVNPPEADLVRAEDG 178 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + P E + V V G LE SN N + M MI L ++F + L+ E + + Sbjct: 179 LFVTSNGNPAEVDANVHVVGGALESSNVNVIDAMVSMISLARQFETQMKLMQSAENNANK 238 Query: 237 AIRNI 241 A + + Sbjct: 239 ASQLL 243 >gi|304321133|ref|YP_003854776.1| flagellar basal-body rod protein FlgG [Parvularcula bermudensis HTCC2503] gi|303300035|gb|ADM09634.1| flagellar basal-body rod protein FlgG [Parvularcula bermudensis HTCC2503] Length = 251 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 42/249 (16%), Positives = 93/249 (37%), Gaps = 21/249 (8%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID--------------QKIS 57 A + R+ +A+N++N T + F++++ + Q Sbjct: 1 MAAQQTRVDVIANNIANMSTTAYAARSAVFADLIYRQDVNPGAISSTQGTIVPTGVQLGL 60 Query: 58 FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVS 116 V + + G+ T +LD A+EG+ +F + P G +RDG+F+V DG +V+ Sbjct: 61 GVQTQAVSMDMRQGALRQTTNDLDIAIEGNGFFEITLPNGEPAFSRDGKFEVDPDGLMVN 120 Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGE-KGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 + G + + + +G+ I T+ L S +G + Sbjct: 121 SDGFALADGITIPREARQVTISADGEVFAFFDDAVEGQSIGTITLTSFVNPKGLEAMGGN 180 Query: 176 GISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + +++G+LE+S + + E+ +I + + + ++ Sbjct: 181 LYRETTASGTPINGQPGQDGLGLLRQGYLEESGVDVVSEIADLIEAQRGYELNSKVLTAA 240 Query: 231 EKSMLEAIR 239 ++ A R Sbjct: 241 DEMYASATR 249 >gi|149183418|ref|ZP_01861851.1| flagellar basal-body rod protein [Bacillus sp. SG-1] gi|148848863|gb|EDL63080.1| flagellar basal-body rod protein [Bacillus sp. SG-1] Length = 280 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 47/280 (16%), Positives = 96/280 (34%), Gaps = 42/280 (15%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDIDQKIS 57 M F + L+ +++ +++N+SN +T G++ + F E++ A++ + Sbjct: 1 MLRGFYTVASGMLSQQRKTEMLSNNLSNANTPGYKADRSSMKAFPEMLLALQGQQQNIPT 60 Query: 58 -----------------FVASGKEYLSKEVGSFISTGTELDFALE--------------G 86 V + + G T D AL G Sbjct: 61 QNGLSLPISRQVGGLNSGVYMQETIPAFMQGDLQETERLTDIALVDGNIPADPETGLPGG 120 Query: 87 DAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG 146 + + TR+G F + G L SASG Y + +I G Sbjct: 121 VFFTLEGADGAPRYTRNGNFTLDGQGYLTSASGLYVLDTEGQRIQLPSDNFKIAEDGRIL 180 Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP----LEDLSGVTVKRGFLEDS 202 + + T ++ + +E G+ P + +++GF+E S Sbjct: 181 VDEVETGRLGTG----FTVNANRLAKEGDGLFRTEDNEPLADAYNSGATFNMQQGFIERS 236 Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 N ++ M M+ + F + ++ ++SM +A+ I Sbjct: 237 NVDTARTMTDMMTAYRAFEANQKILQAYDRSMEKAVNEIG 276 >gi|182412222|ref|YP_001817288.1| hypothetical protein Oter_0398 [Opitutus terrae PB90-1] gi|177839436|gb|ACB73688.1| protein of unknown function DUF1078 [Opitutus terrae PB90-1] Length = 249 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 50/251 (19%), Positives = 103/251 (41%), Gaps = 11/251 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M ++ ALE+ TVA N++++ G+R + FS ++ Sbjct: 1 MNIGLYQSASSLSALERWQETVAQNITSSQVTGYRKRTINFSTQPAGELQSDPRRPVGSE 60 Query: 61 SGKEY--------LSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDD 111 +G ++ G T + D A++GD +F + P G TR+G F V D Sbjct: 61 AGVPTLFPKVNSGINFVSGETQPTRRDFDVAIQGDGFFQVRRPDGSFAYTRNGEFHVRAD 120 Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171 +LV+ +G + +P D++ + G I Q +A M + + + Sbjct: 121 RTLVTGTGDEVLNAGGGPITFLPNGDQVA-INTDGSIFQGETPVANMSVQRFADNAQLIP 179 Query: 172 RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 +G E ++ + +G+LE+SN + EM ++ +++ + + +I + Sbjct: 180 MP-NGYFVPAAGMAPEAVTQPELLQGYLENSNVTPLREMVDLVIISRAYEANQRMITTLD 238 Query: 232 KSMLEAIRNIA 242 + M +A+ + Sbjct: 239 QQMQKALDMLG 249 >gi|77918761|ref|YP_356576.1| flagellar basal body rod protein [Pelobacter carbinolicus DSM 2380] gi|77544844|gb|ABA88406.1| flagellar basal body rod protein [Pelobacter carbinolicus DSM 2380] Length = 245 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 51/247 (20%), Positives = 104/247 (42%), Gaps = 8/247 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK-NDIDQKISFV 59 M + L+ L +Q + T++ N+SN +TVGF+ + F ++ ++ +I ++++ Sbjct: 1 MNRGTYVALSGALVRQQLMDTISHNLSNNETVGFKKGQSVFKTMLERVQTGEILERVNLA 60 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSAS 118 + + G+ +G + A++G+ +F +E I TR G ++ +G L++ Sbjct: 61 EIEEGFTDFSQGTLSPSGIQTHMAIQGEGFFKVEDEAGNIYYTRQGNLRLDYEGHLINNQ 120 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178 G + + I F V + G I+ + + LY+ D R+ S Sbjct: 121 GMALLGEDRRP---ITLTSPDFTVDDDGTITLEDGQKIKIPLYTFDDYSVLTRQGGGQFS 177 Query: 179 PNIPPTPLED--LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + + + +G LE SN N M EM M+ T+ F + ++ E Sbjct: 178 VPKGQERDLEILVKDSHIYQGQLERSNVNLMQEMSHMVESTRVFEACQKMLKTYHSIAAE 237 Query: 237 AIRNIAS 243 A + + Sbjct: 238 A-NKLGT 243 >gi|172061971|ref|YP_001809623.1| flagellar basal body rod protein FlgF [Burkholderia ambifaria MC40-6] gi|171994488|gb|ACB65407.1| flagellar basal-body rod protein FlgF [Burkholderia ambifaria MC40-6] Length = 252 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 50/249 (20%), Positives = 89/249 (35%), Gaps = 9/249 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS--- 57 M + + + VA+N++N T GFR + V + + Sbjct: 1 MDRLIYTAMTGASQSLDQQAIVANNLANASTTGFRAQLATYRAVPMNFGDGSTSDPTTTR 60 Query: 58 -FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLV 115 +V + G TG LD A++G W A+++ TR G V ++G LV Sbjct: 61 TYVLASTPGADYAAGPITRTGNPLDVAVQGAGWLAVQTADGSEAYTRAGNLHVDENGQLV 120 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT---MGLYSVDMSQGFVRR 172 +AS + + + + + I G + A + V+ + R Sbjct: 121 NASNLPVIGNGGPISVPPNAEVTIGKDGTVSALMPGDPPTAVAIVDQMKLVNPDPATLSR 180 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 N G+ P + V V LE SN N + M MI + F + LI ++ Sbjct: 181 GNDGLFRTADGNPADSDPSVVVTPNSLEGSNVNPVTAMVAMIDNARAFQLQSKLIQTADQ 240 Query: 233 SMLEAIRNI 241 + ++ + Sbjct: 241 N-EQSANQL 248 >gi|283780136|ref|YP_003370891.1| flagellar basal body rod protein [Pirellula staleyi DSM 6068] gi|283438589|gb|ADB17031.1| flagellar basal body rod protein [Pirellula staleyi DSM 6068] Length = 250 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 46/251 (18%), Positives = 86/251 (34%), Gaps = 14/251 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE---------VVGAIKND 51 M I A A Q++ + +N++N DT GF+ F Sbjct: 1 MYYGLYISAAGAYAQNQKVEMITNNLANVDTSGFKKELGIFEARQSEAIERGYEQPGTRG 60 Query: 52 IDQKISFVASGKEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTRDGRFKVTD 110 + V + +G+ +T + DFAL D +F +E +LTR G F + Sbjct: 61 VSDIGGGVEFKETVTDFSLGTLRATSSRTDFALPATDQFFEIERDGEALLTRSGNFHFSV 120 Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170 DG L + G + + + + G + +G + + V + Sbjct: 121 DGVLRTQDGDAVLAAGGTP---LTLDPSLPWRVLPGGLISQGGDTVPLSIKQVSNFRSLE 177 Query: 171 RRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + + V+ G LE S N M EM +MI ++ + + +I + Sbjct: 178 KVGLNA-FRANGELTDVPAELRDVRSGSLELSTVNPMQEMVEMIASSRAYENNIKMIQHH 236 Query: 231 EKSMLEAIRNI 241 + + + Sbjct: 237 DGMTGSLVSRL 247 >gi|254474364|ref|ZP_05087750.1| flagellar basal-body rod protein FlgF [Ruegeria sp. R11] gi|214028607|gb|EEB69442.1| flagellar basal-body rod protein FlgF [Ruegeria sp. R11] Length = 239 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 62/236 (26%), Positives = 113/236 (47%), Gaps = 6/236 (2%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65 L+ Q L + + VA+N++N T G+R+ + FSE + + + +S + Sbjct: 6 YTTLSRQSGLMREMRVVANNIANAATTGYRSEGLIFSEFIQSAPGQ--ESLSMARANIRN 63 Query: 66 LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125 S G TG +LD ALEGD +F +E+P G LTR G F G LV+ G LD Sbjct: 64 TSLAQGQLTQTGGDLDLALEGDGYFMVETPMGERLTRSGTFSTNAAGDLVTMDGYRV-LD 122 Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185 P+ +P + G G +S G+ + +G++ + + VR + + Sbjct: 123 AGRAPMFVPGDAKSVKFGADGTLSVDGRALGQIGIFKPEQTHQMVREDGVMFRVDGE--- 179 Query: 186 LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 +E V +GFLE SN N++ E+ +M+ + + + + ++ ++ + +AI+ + Sbjct: 180 VEAAFETRVLQGFLEGSNVNAISEVARMVEIQRAYEMGQSFLETEDQRVRDAIKKL 235 >gi|78067836|ref|YP_370605.1| flagellar basal body rod protein FlgF [Burkholderia sp. 383] gi|77968581|gb|ABB09961.1| conserved hypothetical protein [Burkholderia sp. 383] Length = 252 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 50/249 (20%), Positives = 89/249 (35%), Gaps = 9/249 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS--- 57 M + + + VA+N++N T GFR + V + + Sbjct: 1 MDRLIYTAMTGASQSLDQQAIVANNLANASTTGFRAQLATYRAVPMNFGDGSTSDPTTTR 60 Query: 58 -FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLV 115 +V + G TG LD A++G W ++++ TR G V ++G LV Sbjct: 61 TYVLASTPGADYAPGPITRTGNPLDVAVQGAGWLSVQAADGSEAYTRAGNLHVDENGQLV 120 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT---MGLYSVDMSQGFVRR 172 +AS V + + + + I G + A + V+ + R Sbjct: 121 NASNLPVVGNGGPISVPPNAEVTIGKDGTISALMPGDPPTAVAIVDQMKLVNPDPATLTR 180 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 N G+ P + V V LE SN N + M MI + F + LI ++ Sbjct: 181 GNDGLFRTADGNPADADPNVVVTPNSLEGSNVNPVTAMVAMIDNARAFQLQSKLIQTADQ 240 Query: 233 SMLEAIRNI 241 + ++ + Sbjct: 241 N-EQSANQL 248 >gi|149188067|ref|ZP_01866362.1| flagellar basal body rod protein FlgF [Vibrio shilonii AK1] gi|148838055|gb|EDL54997.1| flagellar basal body rod protein FlgF [Vibrio shilonii AK1] Length = 249 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 54/241 (22%), Positives = 96/241 (39%), Gaps = 11/241 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + ++ Q L A+N++N T GFR + + + F Sbjct: 1 MDRALYLSMSGAKQNMQALQLRANNLANASTPGFRADLAQARSM--QAYGEGMPSRVFSM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASG 119 + + + E GS ++TG +LD +EG W ++ + LTR+G +V +G LV+ +G Sbjct: 59 TERPGHNFEQGSVVTTGRDLDVTIEGQGWISVLDKNGKEGLTRNGSLRVDQNGLLVNGNG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172 L PI +P +G G +S + + VD ++ + Sbjct: 119 NLV-LGERGTPITVPIPLRKIEIGRDGTVSVIPQDAPADEMEIVDRIKLTNTDNRSLFKD 177 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 N P + V + G +E SN N++ EM +I L ++F L+ E Sbjct: 178 TNGLFRNKDPQLGYTASANVQLMTGAIEGSNVNAVGEMTSLIDLQRQFEMQVKLMSTAED 237 Query: 233 S 233 Sbjct: 238 M 238 >gi|119775449|ref|YP_928189.1| flagellar basal body rod protein FlgF [Shewanella amazonensis SB2B] gi|119767949|gb|ABM00520.1| flagellar basal-body rod protein FlgF [Shewanella amazonensis SB2B] Length = 247 Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats. Identities = 47/238 (19%), Positives = 91/238 (38%), Gaps = 7/238 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M I ++ LS A+N++N +T GF+ + + + F Sbjct: 1 MDKFLYIAMSGAKQNLNSLSIRANNLANANTDGFKADLEQSRSM--QAFGEGLPTRVFAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + S G ST +LD A++GD W A+E TR G K + G L ++ G Sbjct: 59 TENPQASFRHGPINSTARDLDVAVKGDGWIAVEDADGNEAYTRAGSLKFDETGLLTNSQG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS----VDMSQGFVRRENS 175 + + D + + +P + +G + + V+ + R + Sbjct: 119 RPVMGDAGPIVLPLPIDKVEIAQDGTITVRPQGATAEVVEEVARIKLVNPGNQNLMRGDD 178 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 G+ + T V ++ +E SN N + EM +I + ++F ++ E++ Sbjct: 179 GLFRMMNGTTAPQDETVALESRAVEGSNVNPVEEMVALIDIQRQFELQVKMMKTAEEN 236 >gi|325295398|ref|YP_004281912.1| fagellar hook-basal body protein [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065846|gb|ADY73853.1| fagellar hook-basal body protein [Desulfurobacterium thermolithotrophum DSM 11699] Length = 238 Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats. Identities = 62/242 (25%), Positives = 115/242 (47%), Gaps = 11/242 (4%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRT-IKVKFSEVVGAIKNDIDQKISFVA 60 + + A ++L T A+N++N +T GF+ I+ + S+ + K D + + F Sbjct: 5 LQALYVLAAGGERAVEQLDTAANNIANINTPGFKKLIEEEMSQHIPDNKGDANNLLIFPR 64 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 ++ E G+ T LD AL+G+ +FA+++ G + TR+G F + +G LV + G Sbjct: 65 FKATHIVLEQGTLQKTDNPLDLALKGNGFFAVKTKTGELYTRNGHFFLNAEGKLVDSKGN 124 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 + S + K+E ++ E G + Q K +A + + + Q +S + N Sbjct: 125 PVL--DISDKEILLIKNEPIHITEDGVVYQGNKKVAVLKIVNF---QSVKPIGDSYYAGN 179 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 P P E V +GFLE SN + + EM ++I+ ++F LI ++ L++ Sbjct: 180 GTPLPTE----AKVLQGFLESSNVDPVKEMVELINAQRRFEIYGNLIRGLDQLNLKS-NE 234 Query: 241 IA 242 I Sbjct: 235 IG 236 >gi|327480021|gb|AEA83331.1| flagellar basal body rod protein FlgF [Pseudomonas stutzeri DSM 4166] Length = 246 Score = 140 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 50/245 (20%), Positives = 94/245 (38%), Gaps = 6/245 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + A+N++N T GFR + + + D + Sbjct: 1 MDKMLYVAMTGASQNARAQQAHANNLANISTTGFRRDFEQARSM--QVFGDSHPARVYAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 S + G+ TG +LD A+EG W A+++P R G + G L +A G Sbjct: 59 SERPGTDFTPGTLQETGRDLDVAVEGQGWIAVQAPDGSEAYVRTGSLNIDVLGMLRTADG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEIS---QKGKVIATMGLYSVDMSQGFVRRENSG 176 + + + I +K ++ + G + V+ + V+ + + G Sbjct: 119 MPVMGNGGPIAIPPEEKVDVGHDGTISIRALGEDPNIVVTVDRIKLVNPDPQQLEKGADG 178 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + P+E V V GFLE SN N++ EM ++ L+++F ++ E Sbjct: 179 LIRLKSGQPVEADGNVRVVSGFLETSNVNAVSEMTSILALSRQFELHVKMMRTAEDDAAA 238 Query: 237 AIRNI 241 R + Sbjct: 239 MARVL 243 >gi|313903628|ref|ZP_07837018.1| fagellar hook-basal body protein [Thermaerobacter subterraneus DSM 13965] gi|313466181|gb|EFR61705.1| fagellar hook-basal body protein [Thermaerobacter subterraneus DSM 13965] Length = 275 Score = 140 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 48/274 (17%), Positives = 89/274 (32%), Gaps = 33/274 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 Q + A A +++ A N++N T GF+ + F+++V A Sbjct: 3 QRALWSSAAGMAAAARQVDLTAGNLANVSTPGFKAARADFADLVYAAAQVPVAPPAAAAG 62 Query: 54 --QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR--GIILTRDGRF--- 106 Q V G +TG+ D A+EG + + P ++LTR G F Sbjct: 63 GVQVGHGVRLAATPRLWSQGPLQATGSPWDLAIEGAGFLQVADPGTGEVLLTRGGTFAAS 122 Query: 107 -----------------KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEIS 149 G + A+G P+L A + D G Sbjct: 123 PVPAGVPGGGEAGEALLVTDGAGRPLLAAGGQPLLLPAGSRGWVVSPDGEVRALLAGGRE 182 Query: 150 QKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYE 209 +A M + D + + +P +++G LE SN + E Sbjct: 183 VPAGRLAVMVPPAPDALESRGEGLYALGGNPVPAGAPGQDGAGWIRQGMLEQSNVDLALE 242 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 M +++ + + + ++ + I + S Sbjct: 243 MTRLLASQRAYQLNARAVLTGDEML-SLINRLRS 275 >gi|83944163|ref|ZP_00956619.1| Flagellar basal body rod protein [Sulfitobacter sp. EE-36] gi|83845030|gb|EAP82911.1| Flagellar basal body rod protein [Sulfitobacter sp. EE-36] Length = 259 Score = 140 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 53/244 (21%), Positives = 102/244 (41%), Gaps = 5/244 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + L+ AL + + T A N++N T G++ I V D I++V Sbjct: 17 MSNISYVALSQATALTRSMDTTAHNLANATTSGYKAIHPVLESVP---DGSGDNAINYVR 73 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLVSASG 119 YL G + TG +D A+ GD W + + P G +R GR V DG L +A G Sbjct: 74 ESGTYLELADGPLMQTGNPMDIAVAGDGWLSFQLPGGETGYSRHGRLVVDVDGQLKTAGG 133 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEIS-QKGKVIATMGLYSVDMSQGFVRRENSGIS 178 + + + + G ++ +G V+ + + +++ + + Sbjct: 134 MPLLGVGGGPVVLPDDVGDEVVITTSGTVTNPQGAVLGAVSVVAINEAAQMLPMGAGMYQ 193 Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 + + VK+GF+E SN N++ EM ++I + + + + L+ ++ AI Sbjct: 194 LPPNAGQPQQMENPQVKQGFIEGSNVNAVLEMTRLIDIQRAYENSVKLMGSDDDLTRTAI 253 Query: 239 RNIA 242 + + Sbjct: 254 QKLG 257 >gi|90021854|ref|YP_527681.1| flagellar basal body rod protein FlgF [Saccharophagus degradans 2-40] gi|89951454|gb|ABD81469.1| Flagellar basal-body rod FlgF [Saccharophagus degradans 2-40] Length = 249 Score = 140 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 43/238 (18%), Positives = 94/238 (39%), Gaps = 6/238 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + I + + A+N++N +T GF+ + + + + Sbjct: 1 MDKALYIAMTGAKHNMLAQTAHANNLANVNTTGFKADFAQARSMPIYYGEGEPTRA-YAL 59 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + G+ + TG ELD A+E + + A+++P TR G + G L + +G Sbjct: 60 TENPGTNFSQGALVETGRELDIAVEREGFIAVQAPDGTEAFTRAGSLHIDSVGILRTGNG 119 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV----DMSQGFVRRENS 175 + + + + +K E+ G I AT+ V + E+ Sbjct: 120 LPVLGNGGPIALPPAEKIEMAADGTITLIPLGEGKEATVQADRVKLVNPDVNTLTKSEDG 179 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 + ++ V + GFLE SN N++ E+ M+ L++++ ++ +++ Sbjct: 180 LLRALENDGEVQADGTVRIVSGFLEASNVNAVNELVSMLELSRQYEMQVKVMQTIKQN 237 >gi|116626491|ref|YP_828647.1| flagellar basal body rod protein [Candidatus Solibacter usitatus Ellin6076] gi|116229653|gb|ABJ88362.1| flagellar basal body rod protein [Candidatus Solibacter usitatus Ellin6076] Length = 241 Score = 140 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 46/242 (19%), Positives = 94/242 (38%), Gaps = 3/242 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M I + A + L +A+N++N T G++ + +S + Sbjct: 1 MDPLTAIAASGLRARMESLDLLANNVANASTGGYKADREFYSLYTAPEAAGDGSLSTMPV 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + ++ G +TG LD A+ G +F + P G + TR+G F++ DG L +A G Sbjct: 61 IERPWVDHSQGILHTTGNALDVAISGKGFFTVNGPSGPLYTRNGSFRLAADGKLTTADGY 120 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 + Q + G ++Q G ++ + + + G ++ S Sbjct: 121 PVRDPQGTALT--LQTTRPVEIARDGTVTQDGAIVGKLEIVDFTSTAGL-SKQGSNYFRA 177 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 P + ++++G LE SN S +++ + ++F + + AI Sbjct: 178 DPSLKSAPAADASLQQGSLEASNTGSAEAAVRLVSVLRQFEMMQKAVSIGNDMSKRAIEE 237 Query: 241 IA 242 +A Sbjct: 238 VA 239 >gi|238028848|ref|YP_002913079.1| flagellar basal body rod protein FlgF [Burkholderia glumae BGR1] gi|37360907|dbj|BAC98361.1| flagellar basal-body rod protein [Burkholderia glumae] gi|237878042|gb|ACR30375.1| Flagellar basal-body rod protein [Burkholderia glumae BGR1] Length = 250 Score = 140 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 56/247 (22%), Positives = 93/247 (37%), Gaps = 7/247 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK--NDIDQKISF 58 M + + S +A+N++NT T GFR + V ++ D +F Sbjct: 1 MDRLIYTAMTGADQALDQQSVIANNLANTSTTGFRAQLATYRAVPMNFGEASNPDTTRTF 60 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSA 117 V S G TG LD A++G W + +P TR G V ++G LV+A Sbjct: 61 VLSSTPGADYSAGPIARTGNPLDVAVQGKGWLTVLAPDGSEGYTRAGNLHVDENGQLVNA 120 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEIS---QKGKVIATMGLYSVDMSQGFVRREN 174 S V + + + I + G ++ + L V+ ++R + Sbjct: 121 SNLPVVGTGGPISVPPNGQVTIGSDGTVSVLAAGDPPSAIAMVDQLKLVNPEPASMKRGD 180 Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 G+ P E V + LE SN N + M M+ + F T LI+ +++ Sbjct: 181 DGLFRTTDGNPAEVDPSVVLAPSSLEGSNVNPVSAMVSMLDNARAFQLHTKLIETADQNE 240 Query: 235 LEAIRNI 241 A I Sbjct: 241 QNA-NQI 246 >gi|167585195|ref|ZP_02377583.1| flagellar basal-body rod protein FlgF [Burkholderia ubonensis Bu] Length = 252 Score = 140 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 53/249 (21%), Positives = 90/249 (36%), Gaps = 9/249 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----DIDQKI 56 M + + + VA+N++N T GFR + V + D Sbjct: 1 MDRLIYTAMTGASQALDQQAIVANNLANASTTGFRAQLATYRAVPMNFGDGSTIDPTTTR 60 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLV 115 ++V S G TG LD A++G W +++ + TRDG V DG LV Sbjct: 61 TYVLSSTPGSDFAPGPISRTGNPLDVAVQGAGWLSVQLADGSEAYTRDGNLHVNQDGQLV 120 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT---MGLYSVDMSQGFVRR 172 +AS V + + + + I G + A + V+ + R Sbjct: 121 NASNLPVVGNGGPISVPPNAEVTIGKDGTVSALMPGDPPTAVAMIDQMKLVNPDPATITR 180 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 N G+ P + V V LE SN N + M MI + F + +I ++ Sbjct: 181 GNDGLFRTTDGNPADADPNVVVVPNSLEGSNVNPVNAMVAMIDNARAFQLQSKMIQTADQ 240 Query: 233 SMLEAIRNI 241 + ++ + Sbjct: 241 N-EQSANQL 248 >gi|264676571|ref|YP_003276477.1| flagellar basal-body rod protein FlgF [Comamonas testosteroni CNB-2] gi|262207083|gb|ACY31181.1| flagellar basal-body rod protein FlgF [Comamonas testosteroni CNB-2] Length = 246 Score = 140 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 51/244 (20%), Positives = 89/244 (36%), Gaps = 5/244 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + A QR + +A N++N T GFR F V ++ F Sbjct: 1 MDKIIYTSMTGANAAAQRQAVLAHNLANAGTNGFRAEMSTFRSV--PLQGSGAGTRVFAL 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119 G TG LD G AWFA++ TR+G F+++ +G LV+++G Sbjct: 59 EATSGYQDTPGPAQRTGRALDAMAMGRAWFAVQGLDGQEAYTRNGVFEISPEGQLVNSNG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS--QGFVRRENSGI 177 + + D + P+ ++ +G + + R + G Sbjct: 119 QAVLSDGGAPIDIPPESTISLGSDGTLTAKMGNQLPVAVGRVKLVTPPVDEPLVRGDDGF 178 Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 L + + G +E SN NS+ M MI +++F L+ E + A Sbjct: 179 FRAAQGDALPNDETARLLSGSIEGSNVNSVETMVGMIAASRQFEQQMKLLQTAETNDKSA 238 Query: 238 IRNI 241 + + Sbjct: 239 SQLL 242 >gi|304321132|ref|YP_003854775.1| flagellar basal-body rod protein FlgF [Parvularcula bermudensis HTCC2503] gi|303300034|gb|ADM09633.1| flagellar basal-body rod protein FlgF [Parvularcula bermudensis HTCC2503] Length = 238 Score = 140 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 55/230 (23%), Positives = 101/230 (43%), Gaps = 7/230 (3%) Query: 9 LAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSK 68 ++ Q L + + +A+N++N T GF++ FSE V + +S + Sbjct: 9 VSRQGGLLKAVQMIANNIANASTPGFKSEGAIFSEYVSE-GRSLATSLSMGRFVGQSTDY 67 Query: 69 EVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMAS 128 G TG DFA++G+ +F + +P G LTR G + +G +V +G P+LD Sbjct: 68 ASGPLKQTGGTYDFAIQGEGFFKVSTPAGERLTRAGSYTTDLEGVIVDPAGN-PLLDEGG 126 Query: 129 VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED 188 I IP VG+ G +S G++ A +G+Y+ G R + + Sbjct: 127 GEITIPPDAVSVGVGQDGTLSVDGEIFAKIGVYT---PLGEPERVGDNLWRVPDGDAV-- 181 Query: 189 LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 V +GF+E SN + E +++ + + + + D+ + + I Sbjct: 182 FEEGRVLQGFIEGSNVQPVAEFAKLMLAQRMYEAGQKMADQEHERLSTLI 231 >gi|157692308|ref|YP_001486770.1| flagellar basal body rod protein FlgG [Bacillus pumilus SAFR-032] gi|157681066|gb|ABV62210.1| flagellar basal body rod protein [Bacillus pumilus SAFR-032] Length = 263 Score = 140 bits (351), Expect = 3e-31, Method: Composition-based stats. Identities = 52/260 (20%), Positives = 98/260 (37%), Gaps = 21/260 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ + +L VA+N++N +T G++ ++ F ++V Sbjct: 1 MLRSLYSGISGMKNFQSKLDVVANNVANVNTHGYKKSRITFKDMVSQTIGSSGGPTNNSG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 Q + GS +T DF + GD +F +ES ++ TR G F Sbjct: 61 SINSKQIGLGSSLSSIDKIMSAGSSQNTNEPYDFYINGDGFFRIESQGEVLYTRTGNFDT 120 Query: 109 TDDGSLVSASGKYPVLDMAS---VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 +GSLV+ G Y + +P + + + + + + L S Sbjct: 121 DSEGSLVTPDGNYLLGMNGQKITIPDGVSSVSVGPDGTISVVENNVSRTVGQISLVSFRN 180 Query: 166 SQGFVRRENSGISPN----IPPTPLEDLSGVT--VKRGFLEDSNANSMYEMGQMIHLTQK 219 + G + ++ P P+ T ++ G LE SN + E +MI + Sbjct: 181 AGGLDKVGDNLYRQTLSSGAPSNPIVPGEQGTGVIQTGKLEMSNVDLTDEFTEMIIAQRG 240 Query: 220 FNSITTLIDENEKSMLEAIR 239 F S I +++ + E + Sbjct: 241 FQSNAKTITTSDEILQELVN 260 >gi|121997318|ref|YP_001002105.1| flagellar basal-body rod protein FlgF [Halorhodospira halophila SL1] gi|121588723|gb|ABM61303.1| flagellar basal-body rod protein FlgF [Halorhodospira halophila SL1] Length = 246 Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats. Identities = 47/244 (19%), Positives = 87/244 (35%), Gaps = 5/244 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + N++N T GFR F + ++ Sbjct: 1 MDRQLYVAMTGAKHSLEAQHHNNQNLANASTPGFRADLDSF--YQAPVYGPGFATRAYAE 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G +TG +LD A++ + WF +++P TR G F+ T +G L + G Sbjct: 59 ELRAGTDFNPGPIETTGRDLDVAIQDEGWFVVQAPDGDEAYTRRGDFQTTPEGLLTTGDG 118 Query: 120 KYPVL--DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177 + S+P V G I L V+ + + G+ Sbjct: 119 HMVMGEAGPISIPPDTKVDIADDGVITATPQGGAGAPIELDRLRLVNPDPTQLVKGEDGL 178 Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + P D + V V+ G LE SN N + MI ++F + ++ E++ + Sbjct: 179 IRHAEGEPAADDAQVRVRGGALEGSNVNMAESLVNMIDHARQFETHIKMLTAAEENEQTS 238 Query: 238 IRNI 241 + + Sbjct: 239 AQLL 242 >gi|114562343|ref|YP_749856.1| flagellar basal body rod protein FlgF [Shewanella frigidimarina NCIMB 400] gi|114333636|gb|ABI71018.1| flagellar basal-body rod protein FlgF [Shewanella frigidimarina NCIMB 400] Length = 247 Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats. Identities = 49/238 (20%), Positives = 97/238 (40%), Gaps = 7/238 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M I ++ L+ A+N++N +T GF+ V+ + + F Sbjct: 1 MDKFLYIAMSGAKQGMNALAVSANNLANANTDGFKADMVQARSM--QAFGEGLPTRVFSM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G +TG +LD A++GD W A+++ TR G K+ G L+++S Sbjct: 59 MESPGSNFNGGPIKTTGRDLDIAVKGDGWLAVQAADGSEGYTRAGSLKIDSTGMLLNSSN 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS----VDMSQGFVRRENS 175 + + + + IP + + + +G + + V+ + R Sbjct: 119 RPVMGASGPIVLPIPVEKIEISANGIISVRPQGATAEVIEEVARIKLVNPGNENLMRGED 178 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 G+ I + GV V+ G +E SN NS++EM MI + +++ ++ E+ Sbjct: 179 GLFRLIAGGNAPNDPGVQVESGAVEGSNVNSVHEMVAMIDIQRQYEMQVKMMKNAEEI 236 >gi|149173758|ref|ZP_01852387.1| Flagellar biosynthesisprotein [Planctomyces maris DSM 8797] gi|148847288|gb|EDL61622.1| Flagellar biosynthesisprotein [Planctomyces maris DSM 8797] Length = 274 Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats. Identities = 52/254 (20%), Positives = 103/254 (40%), Gaps = 13/254 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKF---------SEVVGAIKND 51 M + A RL +++NM+N +T F+ F + + D Sbjct: 18 MIYGMYLSAQGAEANSVRLDVLSNNMANANTTSFKRDVPIFRVNPPHDQHEGALNPLPGD 77 Query: 52 IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDD 111 ++ ++ E GS I+T +E D AL+G +F + + + LTR+G + D Sbjct: 78 LENHSGGISLESITTDFEPGSLITTNSEFDLALKGQGFFQVGNAQESFLTRNGSLSIDGD 137 Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ---KGKVIATMGLYSVDMSQG 168 LV+A P+L I++P + + G ++ + + +G +V M Sbjct: 138 RRLVTADHGMPILTTDGREIKVPIEASHVAITPDGVVTPLDADDQPMGKLGQLAVVMPGA 197 Query: 169 FVRRENSGIS-PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 G + + +GFLE S NS+ EM +++ ++ F S +I Sbjct: 198 LDELVKIGKNLYTTEGRVNPLEGPANIAQGFLEASGTNSVEEMMELVTSSRMFESNINMI 257 Query: 228 DENEKSMLEAIRNI 241 ++S+ ++++ Sbjct: 258 KLQDESLGRLLQSM 271 >gi|311694362|gb|ADP97235.1| flagellar basal-body rod FlgF [marine bacterium HP15] Length = 250 Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats. Identities = 48/252 (19%), Positives = 100/252 (39%), Gaps = 13/252 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + IG++ A+N++N T GF+ + + + + ++ Sbjct: 1 MDKALYIGMSGAKQNMLAQQAHANNLANVSTTGFKKDFAQARSM--PVYGEHHPTRAYAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + G+ + TG +LD A+EG+ W A+++ + + TR G +V +G + A+G Sbjct: 59 TERPGTDLSAGALMETGRKLDVAVEGEGWLAIQNDQGEEVFTRSGSLQVDVNGLVRLANG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV---IATMGLYSVDMSQGFVRRENSG 176 + + + V + EI G + G + L V + + G Sbjct: 119 ELVLGNGGPVALPPFDNVEIGADGTVSIVPVGGPPDQLVEVDRLKLVSPPPEALEKGLDG 178 Query: 177 ISPNIPPT----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 P P + V GFLE SN N++ EM + L++++ ++ + Sbjct: 179 HMRRKPDQALDGPEPPDANQRVASGFLESSNVNAVEEMISNLQLSRQYEMQVKVMTTANE 238 Query: 233 S---MLEAIRNI 241 + ++N+ Sbjct: 239 NSEATARLLQNL 250 >gi|120554034|ref|YP_958385.1| flagellar basal body rod protein FlgF [Marinobacter aquaeolei VT8] gi|120323883|gb|ABM18198.1| flagellar basal-body rod protein FlgF [Marinobacter aquaeolei VT8] Length = 250 Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 102/252 (40%), Gaps = 13/252 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + IG++ A+N++N +T GF+ + + + + ++ Sbjct: 1 MDKALYIGMSGAKQNMLAQRAHANNLANVNTTGFKKDFAQARSM--PVFGEHHPTRAYAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESP-RGIILTRDGRFKVTDDGSLVSASG 119 + + G+ + TG +LD A++G W A+++ + TR G +V +G + ASG Sbjct: 59 TERPGTDLSPGALMETGRKLDVAVDGGGWLAVQNNLGEEVFTRTGSLQVDVNGLVRLASG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV---IATMGLYSVDMSQGFVRRENSG 176 + + + V + ++ + G + G + L V+ + + G Sbjct: 119 ELVLGNGGPVALPPFDNLQVGSDGTISIVPVGGPPDQLVEVDRLKLVNPPADALEKGLDG 178 Query: 177 ISPNIPPT----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 P P + + V GFLE SN N++ EM + L++++ ++ + Sbjct: 179 FIRRKPDQALDGPEPPDAAMRVATGFLESSNVNAVEEMISNLQLSRQYEMQVKVMTTANE 238 Query: 233 S---MLEAIRNI 241 + ++N+ Sbjct: 239 NSEATARLLQNL 250 >gi|307546967|ref|YP_003899446.1| flagellar basal body rod protein FlgF [Halomonas elongata DSM 2581] gi|307218991|emb|CBV44261.1| flagellar basal body rod protein FlgF [Halomonas elongata DSM 2581] Length = 253 Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats. Identities = 54/247 (21%), Positives = 94/247 (38%), Gaps = 12/247 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M ++ ++ V+ N+SN T GFR V ++D ++S VA Sbjct: 1 MDRMLYTAMSGVRQSMEQQGVVSHNLSNVSTTGFRAQLHAMRAVPVQGDGELDTRVS-VA 59 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASG 119 + G TG LD A++G+AW A++ S TR G +V DG L+ ++G Sbjct: 60 ASTPGSDFSPGPMNRTGRTLDVAMQGNAWLAVQASDGSEAYTRRGDLQVDGDG-LLRSAG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK----VIATMGLYSVDMSQGFVRRENS 175 + + + G+ + A + V QG + R Sbjct: 119 RPVIGENGGPIQVPLGSQLSMGSDGTISAIAPGQQADALAAVGRIKLVTPEQGGLERGVD 178 Query: 176 GISPNIPPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 G+ P L V G LE SN +++ M MI + +++ T +I+ Sbjct: 179 GLFRAPPGEDGAVAALPADDQAQVVSGALEGSNVSAVDAMVSMIDVARRYELQTKVIETA 238 Query: 231 EKSMLEA 237 +++ A Sbjct: 239 DENAQRA 245 >gi|85710165|ref|ZP_01041230.1| flagellar basal-body rod protein [Erythrobacter sp. NAP1] gi|85688875|gb|EAQ28879.1| flagellar basal-body rod protein [Erythrobacter sp. NAP1] Length = 247 Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats. Identities = 50/246 (20%), Positives = 82/246 (33%), Gaps = 8/246 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M L A R VA+N++N T GFR F+ +++ + S Sbjct: 1 MDRLIYTALTGMDASMNRQRMVANNLANASTPGFRKE--VFTVTPSTLRDGSIEARSLAK 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESP-RGIILTRDGRFKVTDDGSLVSASG 119 TG LD A+EG+A A +SP G + +R G +V G L + G Sbjct: 59 GAVRSADMAPAKVNPTGQPLDIAVEGEALIAFQSPGGGEVYSRRGDLRVAPTGLLENGEG 118 Query: 120 KYPVLDMASV---PIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG-FVRRENS 175 + + + P + + G+ A + + QG + + Sbjct: 119 LPVLGESGAPVTVPAGFRVTVAPDGTLLASDPAAPGEEPAAIDRIKLASPQGSALAKGTD 178 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 L V G LE SN + + MI + F +I + + Sbjct: 179 SFLRVPGGGVLPTDPTARVIPGALEGSNVETAGTLIDMIDAQRAFEQRARIIQTAGE-LD 237 Query: 236 EAIRNI 241 EA + Sbjct: 238 EASSRL 243 >gi|299531285|ref|ZP_07044695.1| flagellar basal-body rod protein FlgF [Comamonas testosteroni S44] gi|298720692|gb|EFI61639.1| flagellar basal-body rod protein FlgF [Comamonas testosteroni S44] Length = 246 Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats. Identities = 51/244 (20%), Positives = 89/244 (36%), Gaps = 5/244 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + A QR + +A N++N T GFR F V ++ F Sbjct: 1 MDKIIYTSMTGANAAAQRQAVLAHNLANAGTNGFRAEMSTFRSV--PLQGTGAGTRVFAL 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119 G TG LD G AWFA++ TR+G F+++ +G LV+++G Sbjct: 59 EATSGYQDTPGPAQRTGRALDAMAMGRAWFAVQGLDGQEAYTRNGVFEISPEGQLVNSNG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS--QGFVRRENSGI 177 + + D + P+ ++ +G + + R + G Sbjct: 119 QAVLSDGGAPIDIPPESTISLGSDGTLTAKMGNQLPVAVGRVKLVTPPVDEPLVRGDDGF 178 Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 L + + G +E SN NS+ M MI +++F L+ E + A Sbjct: 179 FRAAQGDALPNDETARLLSGSIEGSNVNSVETMVGMIAASRQFEQQMKLLQTAETNDKSA 238 Query: 238 IRNI 241 + + Sbjct: 239 SQLL 242 >gi|238796905|ref|ZP_04640409.1| Flagellar basal-body rod protein flgF [Yersinia mollaretii ATCC 43969] gi|238719165|gb|EEQ10977.1| Flagellar basal-body rod protein flgF [Yersinia mollaretii ATCC 43969] Length = 251 Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats. Identities = 56/252 (22%), Positives = 95/252 (37%), Gaps = 13/252 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A A R V++N++N T GFR F V ++ Q + V Sbjct: 1 MDRAIYTAMGAANAALNRQGVVSNNLANASTTGFRAQLSAFRAV--PVEGPSVQTRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 Y +G+ TG LD AL D W A+E P G TR G ++ +G L+ G Sbjct: 59 ESTPYHDDSMGAINQTGRNLDVALPQDGWLAVELPDGGEGYTRAGNIEIDSEG-LLKVRG 117 Query: 120 KYPVLDMASVPIQIPQKDEIFNV---GEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + D + + + I +G + + L V+ + + G Sbjct: 118 LPVIGDGGPINVPPQSELTIAPDGTITARGAGEEPSALAQVGRLKMVNAKLQDLSHGDDG 177 Query: 177 IS------PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + PN L + + G LE SN + + M MI + F+ +I Sbjct: 178 LFHIAETSPNAGLAALPADQNLQLVPGALESSNVSPVKSMVDMIATARGFDMNMKVISAV 237 Query: 231 EKSMLEAIRNIA 242 + + +A + +A Sbjct: 238 DDNDKKANQLLA 249 >gi|118581835|ref|YP_903085.1| hypothetical protein Ppro_3435 [Pelobacter propionicus DSM 2379] gi|118504545|gb|ABL01028.1| protein of unknown function DUF1078 domain protein [Pelobacter propionicus DSM 2379] Length = 259 Score = 139 bits (349), Expect = 4e-31, Method: Composition-based stats. Identities = 50/255 (19%), Positives = 101/255 (39%), Gaps = 15/255 (5%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 ++ G+ LA + ++ + +N++N +TVGF+ + FS+++ + Q Sbjct: 5 SAMLTGVTGLLANAEDINVIGNNLANVNTVGFKGSRTLFSDLLSTNIGNDSQIGRGTQIQ 64 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASGKY 121 K SF +T D A++G ++F LES G TR G F++ +DG LV+ G + Sbjct: 65 KVDNIISQSSFDTTEITSDLAIQGSSFFLLESTTGSRYVTRAGAFRMNEDGYLVNPDGYF 124 Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM------GLYSVDMSQGFVRRENS 175 + + + + P I ++ +GEI+ AT G+ ++ + + Sbjct: 125 VLDEAGARILLDPAGTTITSIDSEGEITYVDSANATQTYGTKIGVATIPNVGALQKAGGT 184 Query: 176 GISPNIPPTPL--------EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 D + LE SN + + ++I Q + + + I Sbjct: 185 LYDVAASVAAGSGAITPSAADGVVNKIYSNSLEASNVDMASQFVRLIQTQQAYTANSKTI 244 Query: 228 DENEKSMLEAIRNIA 242 ++ + I Sbjct: 245 TTADEMTDVVLNLIR 259 >gi|269836598|ref|YP_003318826.1| hypothetical protein Sthe_0566 [Sphaerobacter thermophilus DSM 20745] gi|269785861|gb|ACZ38004.1| protein of unknown function DUF1078 domain protein [Sphaerobacter thermophilus DSM 20745] Length = 247 Score = 139 bits (349), Expect = 4e-31, Method: Composition-based stats. Identities = 55/250 (22%), Positives = 101/250 (40%), Gaps = 15/250 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVV-----GAIKNDI 52 M S AA +A R T+++N++N T G++ + F E+ G I Sbjct: 1 MIRSMYQAAAAMMAEFSRQLTISENLANVSTPGYKARRTTVQDFREMFLSRFAGGSATPI 60 Query: 53 DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDG 112 + V + + G+ + TG LD A+ G A+FA+++P + TRDGRF++ D Sbjct: 61 GSISTAVRPEERAIDLSQGALVETGRPLDLAIAGTAFFAVQTPDDVQYTRDGRFQLDADR 120 Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172 LV+ G + + I + +V G I G + L Sbjct: 121 RLVTGDG----FPVLGLNGPITLPEGDIHVTADGTILVNGAPAGQLQLVEFPPD---TPI 173 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 E G + + V +GF+E SN + M +M+ ++ + ++ ++ Sbjct: 174 EAVGQNRFAIEGAGQQSETAGVSQGFVEQSNVDLAQSMVEMLEASRSYALAQRMLQVSDA 233 Query: 233 SMLEAIRNIA 242 ++ A+ I Sbjct: 234 TLGTAVNEIG 243 >gi|194014627|ref|ZP_03053244.1| flagellar basal-body rod protein FlgG (Distal rod protein) [Bacillus pumilus ATCC 7061] gi|194013653|gb|EDW23218.1| flagellar basal-body rod protein FlgG (Distal rod protein) [Bacillus pumilus ATCC 7061] Length = 263 Score = 139 bits (349), Expect = 4e-31, Method: Composition-based stats. Identities = 50/260 (19%), Positives = 98/260 (37%), Gaps = 21/260 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ + +L VA+N++N +T G++ ++ F ++V + Sbjct: 1 MLRSLYSGISGMKNFQTKLDVVANNVANVNTHGYKKSRITFKDMVSQTISSSGGPTNNSG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 Q + G+ +T + DF + GD +F +E ++ TR G F Sbjct: 61 SINSKQVGLGSSLSSIDKIMSAGASQNTDRDYDFYINGDGFFRIEKQGEVLYTRAGNFTR 120 Query: 109 TDDGSLVSASGKYPVLDMAS---VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 +GSL ++ G Y + +P I + + + + + L S Sbjct: 121 DSEGSLTTSDGNYVLGMNGQKITIPDGISSVSVGPDGTISVVENNVSRNVGQVSLVSFSN 180 Query: 166 SQGFVRRENSGISPN----IPPTPLEDLSGVT--VKRGFLEDSNANSMYEMGQMIHLTQK 219 + G + + P P+ T ++ G LE SN + E +MI + Sbjct: 181 AAGLDKVGENLYRQTLSSGAPSNPIVPGEQGTGIIQTGRLEMSNVDLTDEFTEMIIAQRG 240 Query: 220 FNSITTLIDENEKSMLEAIR 239 F S I +++ + E + Sbjct: 241 FQSNAKTITTSDEILQELVN 260 >gi|109899401|ref|YP_662656.1| flagellar basal-body rod protein FlgF [Pseudoalteromonas atlantica T6c] gi|109701682|gb|ABG41602.1| flagellar basal-body rod protein FlgF [Pseudoalteromonas atlantica T6c] Length = 247 Score = 139 bits (349), Expect = 4e-31, Method: Composition-based stats. Identities = 50/246 (20%), Positives = 94/246 (38%), Gaps = 8/246 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M I + + A+N++NT T GFR + + + F Sbjct: 1 MDKLLYIAASGAKQDLLGTAVRANNLANTQTTGFRAQLEQARSM--PAFGEGLPTRVFSM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASG 119 + + E G+ I T ELD A++G+ W ++ ++ +R+G +++ DG L +SG Sbjct: 59 TENPANNFEGGAMIQTERELDVAIQGEGWLSVLDANGAEAYSRNGSLQISADGQLQDSSG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 + + V + IP + + +G + V+ + + R N Sbjct: 119 NSILGEFGPVFLPIPLSNINIAGDGTISVRPQGAPETVLEEVGRLKLVNPALDNIDRGND 178 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 G+ + V+++ G LE SN N + EM MI L + + + E Sbjct: 179 GLFRQKDGELAQFDPTVSIRNGMLEGSNVNPVEEMVDMISLQRHYEMQIKFMKEASDLDS 238 Query: 236 EAIRNI 241 A + Sbjct: 239 RA-NQL 243 >gi|254520946|ref|ZP_05133001.1| flagellar basal-body rod protein FlgF [Stenotrophomonas sp. SKA14] gi|219718537|gb|EED37062.1| flagellar basal-body rod protein FlgF [Stenotrophomonas sp. SKA14] Length = 249 Score = 139 bits (349), Expect = 4e-31, Method: Composition-based stats. Identities = 52/253 (20%), Positives = 90/253 (35%), Gaps = 14/253 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + A Q T++ N++N+DT GF+ I+ Sbjct: 1 MDKALYVAMTGARASLQAQGTLSHNLANSDTPGFKEALANTEAF--PIRGPGFASRVDAL 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119 ++ G+ TG LD AL+ W A + TR VT +G LV++SG Sbjct: 59 HVDAGFNRRPGAQHITGKPLDLALQTGTWLAVQSTDGSEAYTRGAALSVTPNGQLVTSSG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172 + + D + + +G G IS + + V + R Sbjct: 119 RPVLDDNNNPIAI--PPYQAMEIGADGTISIIPQGEGPQTMAQVGRIKVVQAPDERLERG 176 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 + P P G V G LE SN ++ + QMI L +++ +I + Sbjct: 177 LDGLFRNTDPQQPFAPAQGTAVHSGQLEGSNVDAAGALVQMIQLQRQYEMQVQVIKHGDD 236 Query: 233 SMLEA--IRNIAS 243 + A + + S Sbjct: 237 NARSANSLLRLGS 249 >gi|103488387|ref|YP_617948.1| protein of unknown function DUF1078-like protein [Sphingopyxis alaskensis RB2256] gi|98978464|gb|ABF54615.1| protein of unknown function DUF1078-like protein [Sphingopyxis alaskensis RB2256] Length = 275 Score = 139 bits (349), Expect = 4e-31, Method: Composition-based stats. Identities = 41/271 (15%), Positives = 91/271 (33%), Gaps = 36/271 (13%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS-- 61 SF L+ A + +S +++N++N VGF+ K +F ++ + + I+ + Sbjct: 2 SFYTSLSGLKASQTDMSVISNNIANAGAVGFKRSKAQFGDIFASSPTQSTKMIAGQGTRL 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFA---LESPRGIILTRDGRFKVTDDGSLVSAS 118 GS+ S+ LD A+ G+ F + TR+G F+ T DG ++ + Sbjct: 62 NGITQQFTQGSYESSEKTLDLAIVGEGLFIVKGEPPREQVSYTRNGSFEPTPDGYVIDTT 121 Query: 119 GKYPVL--------------------------DMASVPIQIPQKDEIFNVGEKGEISQKG 152 G L + + + + + Sbjct: 122 GARLQLLPVDAVGNVTDNTLAGAFDFQLPTGAPSDPASALVNVTIGLDGLVTATFANGED 181 Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSM 207 +++ + + + G ++ P + ++ G LE SN + Sbjct: 182 QMLGKVAMATFPTMSGLRPTGDAHWQSTGESGPPTIDAATNGPMGAIRSGALERSNVDIT 241 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 E+ ++ + F + I+ + I Sbjct: 242 EELVMLMAAQRNFQANAKAIEGASQLTQTII 272 >gi|315497882|ref|YP_004086686.1| flagellar basal-body rod protein flgf [Asticcacaulis excentricus CB 48] gi|315415894|gb|ADU12535.1| flagellar basal-body rod protein FlgF [Asticcacaulis excentricus CB 48] Length = 249 Score = 139 bits (349), Expect = 4e-31, Method: Composition-based stats. Identities = 47/247 (19%), Positives = 102/247 (41%), Gaps = 6/247 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIK--VKFSEVVGAIKNDIDQKISF 58 M + + L+ QL L + L A+N++N +T G++ + V+ E A I +F Sbjct: 1 MDNASYVALSRQLVLRRELDVTANNLANMNTNGYKFEQLLVEPEEGRPAYNLPIRAPANF 60 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGD-AWFALESPRGIILTRDGRFKVTDDGSLVSA 117 G+ +TG + D +EG+ A+F + G + TRDG F V+ G LV+ Sbjct: 61 AYDKGVGRDFSQGALTTTGGDYDVGIEGEGAFFVINGANGPLYTRDGAFTVSPQGVLVTG 120 Query: 118 SGKYPVLDMASV--PIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 G D + + + + + + + ++ ++ Sbjct: 121 DGLPVQGDGGEIRLNPEFGAPSISADGVVSQRSTDGIVRVGRISVVRFASLSDLEKQGDN 180 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 P + +++G +E SN N++ E+ +++ + + + S+T +I++ + Sbjct: 181 RFRATTNVAP-DPAPDARLRQGMIETSNVNALSEVTRLVEINRAYASVTKIIEQQAELNR 239 Query: 236 EAIRNIA 242 A+ + Sbjct: 240 SAVERLG 246 >gi|220934395|ref|YP_002513294.1| flagellar basal-body rod protein FlgF [Thioalkalivibrio sp. HL-EbGR7] gi|219995705|gb|ACL72307.1| flagellar basal-body rod protein FlgF [Thioalkalivibrio sp. HL-EbGR7] Length = 246 Score = 139 bits (349), Expect = 4e-31, Method: Composition-based stats. Identities = 44/237 (18%), Positives = 90/237 (37%), Gaps = 6/237 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + ++ + N++N +T GF+ F+ + ++ Sbjct: 1 MDRMLYVAMSGAKETALTQARNTQNLANANTTGFKASLDVFTS--KQVVGPGHGTRTYAL 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + G +TG +LD A++G+ W A+++P TR G +V G L + +G Sbjct: 59 TQDMKVDLSPGPLQATGRDLDVAVQGNGWIAVQAPDGTEAYTRAGDLRVDSVGLLTTGTG 118 Query: 120 KYPVLDMAS---VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + + P + + + + + + V+ + + R G Sbjct: 119 LPVLGEGGPIAVPPFETFEIGSDGTISIRPLGQGANVLAEVDRIKLVNPNPDELVRGEDG 178 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 + + +GVT+ RG LE SN N++ M MI L + F ++ E + Sbjct: 179 LIRHQLGVEQPPDAGVTLVRGMLESSNVNTVEAMVNMIDLARHFEMQVKMMKTAEDN 235 >gi|221069321|ref|ZP_03545426.1| flagellar basal-body rod protein FlgF [Comamonas testosteroni KF-1] gi|220714344|gb|EED69712.1| flagellar basal-body rod protein FlgF [Comamonas testosteroni KF-1] Length = 246 Score = 139 bits (349), Expect = 4e-31, Method: Composition-based stats. Identities = 51/244 (20%), Positives = 89/244 (36%), Gaps = 5/244 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + A QR + +A N++N T GFR F V ++ F Sbjct: 1 MDRIIYTSMTGANAAAQRQAVLAHNLANAGTNGFRAEMSTFRSV--PLQGTGAGTRVFAL 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119 G TG LD G AWFA++ TR+G F+++ +G LV+++G Sbjct: 59 EATSGYQDTPGPAQRTGRALDAMAMGRAWFAVQGLDGQEAYTRNGVFEISPEGQLVNSNG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS--QGFVRRENSGI 177 + + D + P+ ++ +G + + R + G Sbjct: 119 QAVLSDGGAPIDIPPESTISLGSDGTLTAKMGNQLPVAVGRVKLVTPPVDEPLVRGDDGF 178 Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 L + + G +E SN NS+ M MI +++F L+ E + A Sbjct: 179 FRAAQGDALPNDETARLLSGSIEGSNVNSVETMVGMIAASRQFEQQMKLLQTAETNDKSA 238 Query: 238 IRNI 241 + + Sbjct: 239 SQLL 242 >gi|254511077|ref|ZP_05123144.1| flagellar basal-body rod protein FlgF [Rhodobacteraceae bacterium KLH11] gi|221534788|gb|EEE37776.1| flagellar basal-body rod protein FlgF [Rhodobacteraceae bacterium KLH11] Length = 236 Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats. Identities = 66/241 (27%), Positives = 122/241 (50%), Gaps = 7/241 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M ++ + L+ Q L + VA+N++N +T G+R V FSE + + ++ +S Sbjct: 1 MDSA-YVTLSRQSGLMNEMRMVANNIANANTTGYRQQGVVFSEFIRDMPDN--PSLSLTR 57 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + S + G TG DFA+EGD +F +E+P G LTR G F +G LV+ G Sbjct: 58 AEVRNTSLQQGVLTETGGSFDFAIEGDGFFMVETPAGNRLTRAGSFSPNAEGDLVTMDGH 117 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 L+ P+ +P +VG G +S +G+++ +G+Y+V Q VR + + P Sbjct: 118 RV-LNSNGAPVFVPPDAAAIDVGSDGTLSVEGQLLGQLGVYTVADPQNLVREGRTYLRPA 176 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 P+++ V FLE SN N++ ++ +MI + + + + +D ++ + A++ Sbjct: 177 GQVDPVDEPVVV---HRFLEGSNVNAIGQVTRMIEIQRAYELGQSFLDAEDERVRGALKA 233 Query: 241 I 241 + Sbjct: 234 L 234 >gi|311992327|gb|ADQ26737.1| proximal rod protein [Aeromonas hydrophila] Length = 247 Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats. Identities = 50/239 (20%), Positives = 102/239 (42%), Gaps = 10/239 (4%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 I ++ L+ ++N++N +T GF++ + + + F + Sbjct: 1 DHLLYIAMSGAKESMNSLAVRSNNLANANTTGFKSDFEQARSM--QAFGEGLPTRVFAMA 58 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASGK 120 + + + G ++TG +LD A++G W A++ P+G TR G +++ G+L +++G Sbjct: 59 ERPGQNLQHGMLMTTGRDLDVAVDGQGWIAVQDPKGGEAYTRMGNLQLSATGNLQTSTGL 118 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV------DMSQGFVRREN 174 V D PI +P E + G IS + + A + + + V + Sbjct: 119 NVV-DDGGQPIVLPLPMEKIEINRDGTISGRPEGAAANLPENFQRIKLVNPAVDAVEKGQ 177 Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 G+ + V + G LE SN N + EM +I L ++F + ++ E++ Sbjct: 178 DGLFRRKDGQNEAASATVGLIAGSLEGSNVNVVDEMTNLIRLQRQFETQVKIMKTAEEN 236 >gi|327441046|dbj|BAK17411.1| flagellar basal body rod protein [Solibacillus silvestris StLB046] Length = 329 Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats. Identities = 44/326 (13%), Positives = 92/326 (28%), Gaps = 87/326 (26%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ + +L + +N+SN +T G++ + F +++ ++ Sbjct: 1 MLRSMYSGISGLKNFQTKLDVIGNNISNVNTYGYKKERTIFKDLISQTQSGASGPSTTRG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG----------- 97 Q G+ +TG LD A+ GD +F + Sbjct: 61 GVNAIQVGLGSQLAAIDTIHNAGAMQTTGRTLDLAISGDGFFMVADATDFVQGDPANGEP 120 Query: 98 --------IILTRDGRFKVTDDGSLVS--------------------------------- 116 + TR G F + +G LV+ Sbjct: 121 ATAGGYTSTLYTRAGNFYMDRNGFLVNGDGKYLVGFAGDVTAYDAINPLNAPGSGFEQNK 180 Query: 117 ------------------ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158 A G + + + + T+ Sbjct: 181 PEVAGGTNLIDPATGELIAQGGTTPSPIRIPTTAQSMSISQDGSISFVDSAGDLQYAGTI 240 Query: 159 GLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQM 213 L S G + ++ + ++ GF+E SN + E +M Sbjct: 241 VLAKFANSGGLEKTGSNYFQTTPNSGAIYAQLATQDGIGSINSGFMEMSNVDLSEEFTEM 300 Query: 214 IHLTQKFNSITTLIDENEKSMLEAIR 239 I + F + + +I +++ + E + Sbjct: 301 IVAQRGFQANSRIITTSDEILQELVN 326 >gi|315125985|ref|YP_004067988.1| FlgFL [Pseudoalteromonas sp. SM9913] gi|315014499|gb|ADT67837.1| FlgFL [Pseudoalteromonas sp. SM9913] Length = 243 Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats. Identities = 48/234 (20%), Positives = 91/234 (38%), Gaps = 4/234 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M+ ++ L A+N++N TVGF+ + ++ ++ + + Sbjct: 1 MEKLIYTAVSGAELNNTALRVAANNLANVSTVGFKADLEQAQSMM--VQGEGFRTRYHAQ 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASG 119 G + TG LD AL + + G TR G V DG V+ +G Sbjct: 59 LTPVTTDLSSGPIMDTGRNLDIALSNGGYLEVMDDNGEPAYTRAGNLVVDADG-FVTVNG 117 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 + D + + EI + G G VIA + + + + G+ Sbjct: 118 RRVQGDGGDIQLPEFGDIEIGSNGMINLTPIGGGVIAEDAQIKLASTDANLIKGADGLLR 177 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 PLE +TV+ G LE SN N++ EM + ++++++F ++ ++ Sbjct: 178 ANDLQPLEADETITVRTGALEGSNVNAVAEMIKTMNISRQFEMNVKMMKSADEL 231 >gi|87119675|ref|ZP_01075572.1| hypothetical protein MED121_07040 [Marinomonas sp. MED121] gi|86165151|gb|EAQ66419.1| hypothetical protein MED121_07040 [Marinomonas sp. MED121] Length = 247 Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats. Identities = 49/233 (21%), Positives = 99/233 (42%), Gaps = 6/233 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + ++ + + A+N++N +T GFR + + + + + Sbjct: 1 MDRALYLAMSGGKQIMHAQTVRANNLANVNTTGFRADFEQARAM--PVYGEHYASRVYSM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASG 119 + E G+ I T LD A++GD + A+ + TR G ++T +G LV+ SG Sbjct: 59 TENPATRYESGALIQTDRPLDIAMQGDGFIAVLDHQGAEAYTRSGDLQITANGQLVNGSG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV--IATMGLYSVDMSQ-GFVRRENSG 176 + + + K I G + + G +AT+G + + + G Sbjct: 119 LPIMGARGPIFLPPIDKISIGEDGTISIVPEGGSAAEVATIGQIKLVNPDTQLIEKGTDG 178 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 + TP E +K GFLE SN +++ E+ +++ L+++F ++D Sbjct: 179 LLRAKAGTPFEQDFTAALKSGFLESSNVSAVEELTKIMSLSRQFEMNIKVMDT 231 >gi|73539451|ref|YP_299818.1| flagellar basal body rod protein FlgF [Ralstonia eutropha JMP134] gi|72122788|gb|AAZ64974.1| Protein of unknown function DUF1078 [Ralstonia eutropha JMP134] Length = 247 Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats. Identities = 50/246 (20%), Positives = 87/246 (35%), Gaps = 8/246 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M L+ + + + V++N++N T FR + V + +F Sbjct: 1 MDRMIYTALSGAKQILDQQAAVSNNLANVSTPAFRAQVNMYRAV--PVVGQESPTRAFTL 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASG 119 + G TG LD AL+G+ W ++ TR G ++ DG + ++SG Sbjct: 59 ASTPGADMRAGPLTYTGRPLDVALQGNGWLVVQARDGSEAYTRAGSLQIAQDGQVQTSSG 118 Query: 120 KYPVLDM---ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + D + P + +G + L V+ + R + G Sbjct: 119 LPVMGDGGPLSVPPGSQVTIGSDGTITARGPGEASAGLAQVGKLRVVNPPADSIARGDDG 178 Query: 177 ISPNIPP-TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 + P PLE V V G +E SN N M MI ++F +I + + Sbjct: 179 LFRLRPGAQPLEADPTVRVVSGAIEGSNVNPTEAMVDMIANARRFEMQMKMITGADTNDQ 238 Query: 236 EAIRNI 241 A + Sbjct: 239 RA-NQL 243 >gi|82702454|ref|YP_412020.1| flagellar basal body rod protein FlgF [Nitrosospira multiformis ATCC 25196] gi|82410519|gb|ABB74628.1| conserved hypothetical protein [Nitrosospira multiformis ATCC 25196] Length = 250 Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats. Identities = 53/248 (21%), Positives = 97/248 (39%), Gaps = 9/248 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + + V+ N++N +T G+R V + +D +FV Sbjct: 1 MDRMIYVAMTGAKHALGQHAAVSHNLANANTPGYRAEINALRAV--PVFSDTLATRAFVV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASG 119 G+ +T ELD A++G W A++ + TR+G V+ +G L + G Sbjct: 59 DSSVGADFRPGTVQNTARELDVAIQGAGWIAVQLADGSEAYTRNGDLHVSANGVLQTRDG 118 Query: 120 KYPVLD------MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRE 173 + D + + I I V S+ +A + V+ + + R Sbjct: 119 LNVLGDTGLISIQPNAKVTIGTDGTISTVPAGAGTSEPNLAVAVGRIKLVNPPEAQLVRG 178 Query: 174 NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 + G+ E VT+ G LE SN N + M MI L+++F + L+ E + Sbjct: 179 SDGLFRLSGGGEAEADGNVTLSSGALEGSNVNVVEAMVDMISLSRQFETHMKLLQNAEGN 238 Query: 234 MLEAIRNI 241 A + + Sbjct: 239 AQRASQLL 246 >gi|308050371|ref|YP_003913937.1| flagellar basal-body rod protein FlgF [Ferrimonas balearica DSM 9799] gi|307632561|gb|ADN76863.1| flagellar basal-body rod protein FlgF [Ferrimonas balearica DSM 9799] Length = 245 Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats. Identities = 44/238 (18%), Positives = 94/238 (39%), Gaps = 7/238 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M I + +L++ A+N++N + GF+ + + + F Sbjct: 1 MDNYLYIAASGAKQNLHQLASHANNLANAKSDGFKADMSQARAM--QAFGEGLPTRVFAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119 + + + + G+ +TG LD A++ WF + LTR G + + G L+++ G Sbjct: 59 TERPATNFDPGAIKTTGRTLDVAIKDQGWFVVQDDGGNEALTRAGSLRFDEAGMLMNSEG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM----GLYSVDMSQGFVRRENS 175 + + + + +P + + +G M L V+ + + Sbjct: 119 QPIMGLAGPIFLPLPIEKVEIAQDGMITVRPQGAPANAMEEVGQLRLVNPPLNSLTKGED 178 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 G+ + P + VT+ G +E SN N + E+ MI ++F+ L+ E++ Sbjct: 179 GLFRRLDGQPYANAVEVTLVTGAVEGSNVNPVNELVGMIEAQRQFDMQLKLMKTAEEN 236 >gi|126738579|ref|ZP_01754284.1| flagellar basal-body rod protein FlgF [Roseobacter sp. SK209-2-6] gi|126720378|gb|EBA17084.1| flagellar basal-body rod protein FlgF [Roseobacter sp. SK209-2-6] Length = 238 Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats. Identities = 66/241 (27%), Positives = 116/241 (48%), Gaps = 6/241 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + L+ Q L + + VA+N++N+ T G+R+ + FSE V + Q +S Sbjct: 1 MGATSYTTLSRQSGLMREMRVVANNIANSATTGYRSEGLIFSEYVQSSPGQ--QSLSMSR 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + S E G TG DFA+EG+ +F +E+P G LTR G F +G LV+ G Sbjct: 59 ANIYNTSLEQGQLTKTGGTFDFAIEGEGFFMVETPMGERLTRAGAFSPNAEGDLVTMDGY 118 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 +D P+ +P + VG G I+ G I +GL+ VR + Sbjct: 119 RV-MDAGGSPVFVPGSAQSIEVGADGTITADGNSIGQIGLFRPADKNTMVREDGVMFRVE 177 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 P E+ V + +G+ E SN N++ ++ +MI + + + + ++ ++ + +AI+N Sbjct: 178 GDIDPAEN---VAMLQGYTEGSNVNAIGQVTRMIEIQRAYEMGQSFLETEDRRIRDAIKN 234 Query: 241 I 241 + Sbjct: 235 L 235 >gi|261409668|ref|YP_003245909.1| fagellar hook-basal body protein [Paenibacillus sp. Y412MC10] gi|261286131|gb|ACX68102.1| fagellar hook-basal body protein [Paenibacillus sp. Y412MC10] Length = 275 Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats. Identities = 54/279 (19%), Positives = 101/279 (36%), Gaps = 42/279 (15%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--------- 51 M S + + AL+QRL +ADNM+N +T G++ + F +V+ ++ Sbjct: 1 MNNSMISAMVSMNALQQRLDVIADNMANVNTAGYKKKEASFEDVLTQVQGHHKDFDRTGR 60 Query: 52 ----IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107 + + E G+ TG LD ++G A FA++ I TR+G F Sbjct: 61 ATPLGYTLGYGMRLSSVVPNMEQGAMKETGNPLDLMIDGQAMFAVQGDGAIGYTREGGFH 120 Query: 108 VTD-------------DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEIS----- 149 V+ G V P+ A + I ++ +I G + Sbjct: 121 VSPDARNPNNLLLVNSQGYPVLDVNDNPISLPAKGKVAINERGQIIVETPTGGRTAPYAT 180 Query: 150 ------QKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSN 203 ++ + + +G + G + +P P P V GF+E SN Sbjct: 181 LKLVELERPEGLVAVGDNLFVLGNGLAEGDVFDTTPPAPGEP----PKSKVLSGFVEQSN 236 Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 N E+ +M+ + + + + ++ M + Sbjct: 237 VNLTDELTKMMEVQRAYQLTARALSSSDTMM-NLANTMR 274 >gi|167750705|ref|ZP_02422832.1| hypothetical protein EUBSIR_01683 [Eubacterium siraeum DSM 15702] gi|167656384|gb|EDS00514.1| hypothetical protein EUBSIR_01683 [Eubacterium siraeum DSM 15702] gi|291532044|emb|CBK97629.1| fagellar hook-basal body proteins [Eubacterium siraeum 70/3] gi|291558218|emb|CBL35335.1| fagellar hook-basal body proteins [Eubacterium siraeum V10Sc8a] Length = 242 Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats. Identities = 45/249 (18%), Positives = 98/249 (39%), Gaps = 15/249 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID---QKIS 57 M +F G +A ++ L+ ++N++N +TVGF+ + F++ + ++ + + Q Sbjct: 1 MNIAFYTGKTGLIAQQEGLNVYSNNIANVNTVGFKASRPSFADCIYTVQRNTEPDWQTGH 60 Query: 58 FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR--GIILTRDGRFKVTDDG--S 113 L G F T +LDFA+ + F + + TR G F+++ G Sbjct: 61 GEYVHSTQLMYSEGVFTYTDNDLDFAIPTEEGFFAVMDKYGDVNYTRAGDFQMSQIGDHW 120 Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRE 173 + ++ VLD I +P E + +G+Y+ D + G Sbjct: 121 ELVSANGEFVLDYEGNHITVP-------FIEGTSKPDYEALTKMIGVYTFDNNFGLELLG 173 Query: 174 NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 ++ ++ + R LE SN + +M ++I + + ++ ++ Sbjct: 174 SNKMTATERSGEAVADRSIDKIRMALERSNTDIAGDMVRIIETQRSYQMSARVVQTADE- 232 Query: 234 MLEAIRNIA 242 + N+ Sbjct: 233 LERITNNLR 241 >gi|83955137|ref|ZP_00963793.1| Flagellar basal body rod protein [Sulfitobacter sp. NAS-14.1] gi|83840466|gb|EAP79639.1| Flagellar basal body rod protein [Sulfitobacter sp. NAS-14.1] Length = 259 Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats. Identities = 51/244 (20%), Positives = 101/244 (41%), Gaps = 5/244 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + L+ L + + T A N++N T G++ I + D I++V Sbjct: 17 MTNISYVALSQATVLTRNMDTTAHNLANATTSGYKAIHPVLESIP---DGSGDNAINYVR 73 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLVSASG 119 YL G + TG +D A+ GD W + + P G +R GR V DG L +A G Sbjct: 74 ESGTYLELTDGPLMQTGNPMDIAVAGDGWLSFQLPGGETGYSRHGRLVVDVDGQLKTAGG 133 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEIS-QKGKVIATMGLYSVDMSQGFVRRENSGIS 178 + + + + G ++ +G V+ + + +++ + + Sbjct: 134 MPLLGVGGGPVVLPDDVGDEVVITTSGTVTNPQGAVLGAVSVVAINEAAQMLPMGAGMYQ 193 Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 + + VK+GF+E SN N++ EM ++I + + + + L+ ++ AI Sbjct: 194 LPPNAGQPQQMENPQVKQGFIEGSNVNAVLEMTRLIDIQRAYENSVKLMGSDDDLTRTAI 253 Query: 239 RNIA 242 + + Sbjct: 254 QKLG 257 >gi|332994161|gb|AEF04216.1| flagellar basal-body rod protein FlgF [Alteromonas sp. SN2] Length = 247 Score = 138 bits (347), Expect = 7e-31, Method: Composition-based stats. Identities = 54/238 (22%), Positives = 92/238 (38%), Gaps = 7/238 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M I + A+N++N T GFR + + + F Sbjct: 1 MDKLLYIAASGASQDLLGTGLRANNLANAQTTGFRAQLEQARSM--PAYGEGLPSRVFSM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + E G I TG +LD A++GD WFA++ +RDG FK+ DDG L Sbjct: 59 TESPSNNYESGPMIQTGRDLDVAIQGDGWFAVQDDNGQEAYSRDGNFKLGDDGILTDVHN 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 + + D + + +P + + + Q G + V + + R Sbjct: 119 RPVLGDNGPIFLPVPLDNLDIGMDGTLSMRQLGAPENVIEDVGRLKLVKPNYADMERGTD 178 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 G+ T +GV V G LE SN N++ EM MI L + + ++ + ++ Sbjct: 179 GLFRMEDGTVAPASAGVKVMSGMLEGSNVNAVDEMVNMISLQRHYELQVKMMKQADEL 236 >gi|332533174|ref|ZP_08409043.1| flagellar basal-body rod protein FlgF [Pseudoalteromonas haloplanktis ANT/505] gi|332037456|gb|EGI73910.1| flagellar basal-body rod protein FlgF [Pseudoalteromonas haloplanktis ANT/505] Length = 244 Score = 138 bits (347), Expect = 7e-31, Method: Composition-based stats. Identities = 49/238 (20%), Positives = 95/238 (39%), Gaps = 7/238 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 I + Q L+ A+N++N +T GF+ + + + F + Sbjct: 1 MVYIAASGAKQSLQGLALKANNLANANTTGFKADFAQARSM--QAFGEGLPTRVFSMQER 58 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122 + G + TG +LD A+ +AW A++ T+ G VT G LV++ G+ Sbjct: 59 PGSNMVSGGIVQTGRDLDIAMSDNAWLAVQDASGNEAYTKVGTLNVTAQGMLVTSHGRQV 118 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS----VDMSQGFVRRENSGIS 178 + + V + +P + F+ ++ +G + V+ + + + N G+ Sbjct: 119 IGEGGPVILPVPVEKIGFSQDGAIQVRPQGAPANFLEEIDTLRVVEANSSQLEKGNDGLF 178 Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 ++ + V V G LE SN N ++EM MI ++F L+ E+ Sbjct: 179 RPKANVTVDTSANVKVLSGSLEMSNVNPVHEMVDMISHQRQFELQVKLMKTAEEIDER 236 >gi|83747653|ref|ZP_00944689.1| FlgF [Ralstonia solanacearum UW551] gi|207728347|ref|YP_002256741.1| flagellar basal-body rod protein flgf [Ralstonia solanacearum MolK2] gi|207739736|ref|YP_002258129.1| flagellar basal-body rod protein flgf [Ralstonia solanacearum IPO1609] gi|300696914|ref|YP_003747575.1| flagellar component of cell-proximal portion of basal-body rod [Ralstonia solanacearum CFBP2957] gi|83725705|gb|EAP72847.1| FlgF [Ralstonia solanacearum UW551] gi|206591593|emb|CAQ57205.1| flagellar basal-body rod protein flgf [Ralstonia solanacearum MolK2] gi|206593118|emb|CAQ60024.1| flagellar basal-body rod protein flgf [Ralstonia solanacearum IPO1609] gi|299073638|emb|CBJ53158.1| flagellar component of cell-proximal portion of basal-body rod [Ralstonia solanacearum CFBP2957] Length = 245 Score = 138 bits (347), Expect = 7e-31, Method: Composition-based stats. Identities = 48/244 (19%), Positives = 92/244 (37%), Gaps = 6/244 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + L + + A+N++N+ T GF+ F V ++ D SFV Sbjct: 1 MDRMIYVAMTGAKHLFDQQAASANNLANSSTTGFKAQIDAFHTV--GVQGDGSPTRSFVM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G +TG LD A++G +FA+++ TR G F+V+ DG++ + SG Sbjct: 59 ASAIGTDMTPGPIETTGRSLDVAIDGQGFFAVQTADGSEAYTRAGAFQVSADGTIETLSG 118 Query: 120 KYPVLDMASV--PIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177 + + D V P + + ++ L V + + R G+ Sbjct: 119 QPVLGDGGPVTLPPDTTVQFAKDGTINAISADNRTPPVSLGRLKLVSIDPSNLDRGTDGL 178 Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 V + G LE SN + + MI ++++ + + + A Sbjct: 179 FRQRDGQDANVDERVRITGGALEGSNVSLTDSLVNMIEISRQLELQMKALHTGDTNAQSA 238 Query: 238 IRNI 241 + Sbjct: 239 -NEL 241 >gi|315649858|ref|ZP_07902941.1| fagellar hook-basal body protein [Paenibacillus vortex V453] gi|315274832|gb|EFU38213.1| fagellar hook-basal body protein [Paenibacillus vortex V453] Length = 274 Score = 138 bits (347), Expect = 7e-31, Method: Composition-based stats. Identities = 58/267 (21%), Positives = 111/267 (41%), Gaps = 32/267 (11%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--------- 51 M S + + AL+QRL +ADNM+N +T G++ + F +V+ ++ Sbjct: 1 MNNSMISAMVSMNALQQRLDVIADNMANVNTAGYKKKEASFDDVLTQVQGHHKDFDRTGR 60 Query: 52 ----IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107 + + E G+ TG D ++G A FA++ I TR+G F Sbjct: 61 STPLGYTLGYGMRLSSVVQNMEQGAMKETGNPFDLMIDGQAMFAVQGDGAIGYTREGGFH 120 Query: 108 -----VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG----EISQKGKVIATM 158 + L++ S YPVLD+ + PI P K ++ + + ++AT+ Sbjct: 121 VTPDARNPNNLLLANSQGYPVLDVNNNPISFPSKGKVAVNEKGQIILETFAGVRSIVATL 180 Query: 159 GLYSVDMSQGFVRRENS----------GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMY 208 + ++ +G V ++ G ++ P + +V GF+E SN N Sbjct: 181 KVVELERPEGLVAVGDNLFVVGEGLTEGDVFDLTPPAPGEPPKSSVLSGFVEQSNVNLTD 240 Query: 209 EMGQMIHLTQKFNSITTLIDENEKSML 235 EM +M+ + + + + + ++ M Sbjct: 241 EMTKMMEVQRAYQLMARALSSSDTMMN 267 >gi|239817164|ref|YP_002946074.1| flagellar basal body rod protein FlgF [Variovorax paradoxus S110] gi|239803741|gb|ACS20808.1| flagellar basal-body rod protein FlgF [Variovorax paradoxus S110] Length = 248 Score = 138 bits (347), Expect = 7e-31, Method: Composition-based stats. Identities = 58/248 (23%), Positives = 91/248 (36%), Gaps = 8/248 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + ++ ++ ++VA+NM+N T GFR F V + + VA Sbjct: 1 MDRMLYVAMSGAKQAMEQQASVANNMANASTPGFRAQINSFRAVPVTDGAEATTRAYVVA 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G TG LD A+ GD W A+++P G TR G +V +G ++ G Sbjct: 61 T-TPGADFSHGPLTETGRALDVAIHGDGWLAVQTPDGGEAYTRVGNLQVNAEG-QLTTMG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV---IATMGLYSVDMS--QGFVRREN 174 PV A P G IA +G + VR + Sbjct: 119 SLPVAGDAGALTVPPGSTVAIAANGLVTARGAGDPAIGIAEVGRLKLVNPPVADLVRGAD 178 Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 P E + VTV G +E SN N + M MI + F + +++ Sbjct: 179 GLFRMREGLAPAEPDAAVTVTTGAVEGSNVNGVEAMVAMIANARSFEMQMKSMHSADENA 238 Query: 235 LEAIRNIA 242 A + +A Sbjct: 239 QSANKLLA 246 >gi|163733143|ref|ZP_02140587.1| flagellar basal-body rod protein FlgG [Roseobacter litoralis Och 149] gi|161393678|gb|EDQ18003.1| flagellar basal-body rod protein FlgG [Roseobacter litoralis Och 149] Length = 246 Score = 138 bits (347), Expect = 7e-31, Method: Composition-based stats. Identities = 41/244 (16%), Positives = 94/244 (38%), Gaps = 21/244 (8%) Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID--------------QKISFVASG 62 R+ T+++N+SN T G+ + +F+++ + Q V Sbjct: 1 MRVETISNNLSNMSTTGYNARRAEFADLHYQQMSRPGTVNATDGTVLPTGVQLGLGVRPS 60 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLVSASGKY 121 + + GS +TG +LD A+EG + + P G TRDG K +G +V++ G Sbjct: 61 AVSVQLQQGSLAATGGDLDLAIEGIGFLEVTLPSGQAAYTRDGGLKRDAEGLIVTSDGYP 120 Query: 122 PVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 ++ + + V + +++ + ++G + + Sbjct: 121 VEPEIVIPDDARSISINTSGEVFAYFSDATDAELLGQFNMAGFTNAKGLEALGGNLFAET 180 Query: 181 IPPTP-----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 + TV++G+LE S+ +++ E+ ++I + + +I ++ M Sbjct: 181 EASGAAIVSTPGEDGLGTVRQGYLESSSVDAVREITELIEAQRGYEMNAKVISAADQMMG 240 Query: 236 EAIR 239 + Sbjct: 241 ATTQ 244 >gi|329928721|ref|ZP_08282570.1| putative flagellar basal-body rod protein FlgB [Paenibacillus sp. HGF5] gi|328937502|gb|EGG33920.1| putative flagellar basal-body rod protein FlgB [Paenibacillus sp. HGF5] Length = 275 Score = 138 bits (346), Expect = 8e-31, Method: Composition-based stats. Identities = 54/279 (19%), Positives = 100/279 (35%), Gaps = 42/279 (15%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--------- 51 M S + + AL+QRL +ADNM+N +T G++ + F +V+ ++ Sbjct: 1 MNNSMISAMVSMNALQQRLDVIADNMANVNTAGYKKKEASFEDVLTQVQGHHKDFDRTGR 60 Query: 52 ----IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107 + + E G+ TG LD ++G A FA++ I TR+G F Sbjct: 61 ATPLGYTLGYGMRLSSVVPNMEQGAMKETGNPLDLMIDGQAMFAVQGDGAIGYTREGGFH 120 Query: 108 VTD-------------DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEIS----- 149 V+ G V P+ A + I + +I G + Sbjct: 121 VSPDARNPNNLLLVNSQGYPVLDVNDNPISLPAKGKVAINESGQIIVETPTGGRTAPYAT 180 Query: 150 ------QKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSN 203 ++ + + +G + G + +P P P V GF+E SN Sbjct: 181 LKLVELERPEGLVAVGDNLFVLGNGLAEGDVFDTTPPAPGEP----PKSKVLSGFVEQSN 236 Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 N E+ +M+ + + + + ++ M + Sbjct: 237 VNLTDELTKMMEVQRAYQLTARALSSSDTMM-NLANTMR 274 >gi|169826608|ref|YP_001696766.1| flagellar hook-basal body complex protein [Lysinibacillus sphaericus C3-41] gi|168991096|gb|ACA38636.1| Flagellar hook-basal body complex protein [Lysinibacillus sphaericus C3-41] Length = 280 Score = 138 bits (346), Expect = 8e-31, Method: Composition-based stats. Identities = 53/276 (19%), Positives = 104/276 (37%), Gaps = 39/276 (14%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVV-------------- 45 F + ++R +++N++N +T GF+ + F +++ Sbjct: 6 KGFYTVATGMITQQRRTELLSNNLANANTPGFKADQSTIRSFPDMLMSSIGKTNAPANQQ 65 Query: 46 --GAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFAL------------EGDAWFA 91 + + + + + G ST D AL G +F Sbjct: 66 AGAEYMSQVGALNTGTYLQETLPNYIQGQIYSTDFTTDMALIDGNLPQNEDGVTGSIFFR 125 Query: 92 LESPRG-IILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ 150 L P G TR+G F + G LV+ G Y + D +I ++ F + E G I Sbjct: 126 LAHPDGGEAYTRNGNFTLDGQGYLVNGQGLYVLNDAGQ---RIQLPNDDFRLDESGAIYV 182 Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISP----NIPPTPLEDLSGVTVKRGFLEDSNANS 206 + +A +G+ +++N I N+P + T+++ FLE SN +S Sbjct: 183 NNQQVARVGVSYAANPNMLQKQDNGLIRTENGANLPSAYGTNGVSFTLRQNFLEGSNVDS 242 Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 M ++ + F + ++ ++SM +A+ I Sbjct: 243 GRAMTDLMTAYRAFEANQKVLQAYDRSMEKAVNEIG 278 >gi|296534159|ref|ZP_06896653.1| flagellar basal-body rod protein FlgF [Roseomonas cervicalis ATCC 49957] gi|296265514|gb|EFH11645.1| flagellar basal-body rod protein FlgF [Roseomonas cervicalis ATCC 49957] Length = 248 Score = 138 bits (346), Expect = 8e-31, Method: Composition-based stats. Identities = 50/245 (20%), Positives = 107/245 (43%), Gaps = 6/245 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV----VGAIKNDIDQKI 56 M + L+ A ++ + +A N++N DT G+++ ++ F +G +++ Sbjct: 1 MDMPGYVVLSRLAAQQRATAALAMNIANADTPGYKSAQMVFGAHIDRQLGVDAPRGGREV 60 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVS 116 +F + GS +TG LD AL G+ +FA+++ G TR GRF ++ +G +V Sbjct: 61 AFSQDRATWRDFTPGSLQATGNPLDLALGGEGFFAVQTGNGERYTRAGRFALSPEGGIVD 120 Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 G PVL+ P+ +P + ++ G + + + + + + Q + + Sbjct: 121 -IGGNPVLNEDGAPLVLPPNAQRIDITGDGTVRTEQGPVGRLRVVNFADPQKLIAQGERL 179 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 P + + V +G +E SN S+ E+ ++ ++F + ++ Sbjct: 180 FEAPAE-LPAQPVDAPRVVQGSVEGSNVQSIVELTRLTAEMREFQFASQFVETEGDRAKT 238 Query: 237 AIRNI 241 A+ I Sbjct: 239 AVERI 243 >gi|116694220|ref|YP_728431.1| flagellar basal body rod protein FlgF [Ralstonia eutropha H16] gi|113528719|emb|CAJ95066.1| flagellar basal body rod protein [Ralstonia eutropha H16] Length = 247 Score = 138 bits (346), Expect = 8e-31, Method: Composition-based stats. Identities = 53/246 (21%), Positives = 88/246 (35%), Gaps = 8/246 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M L+ + + + V++N++N T FR + V + +F Sbjct: 1 MDRMIYTALSGAKQILDQQAAVSNNLANVSTPAFRAQVNLYRAV--PVVGPEAGTRAFTV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G TG LD AL+G+ W +++P TR G +V DG + + SG Sbjct: 59 ASTPGADMRAGPLTYTGRTLDVALQGNGWLVVQAPDGTEAYTRAGALQVAQDGQVQTISG 118 Query: 120 KYPVLDMAS---VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + D P + +G + L V+ + R + G Sbjct: 119 LPVMGDGGPLAVPPGSQVTIGTDGTITARGPGEASAGLAQVGRLRVVNPPNDAIARGDDG 178 Query: 177 ISPNIPP-TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 + P PLE V V G LE SN N M +MI ++F +I + + Sbjct: 179 LFRLRPGAQPLEADPTVRVISGALEGSNVNPTEAMVEMIANARRFEMQMKMIQGADGNEQ 238 Query: 236 EAIRNI 241 A + Sbjct: 239 RA-NQL 243 >gi|300693339|ref|YP_003749312.1| flagellar component of cell-proximal portion of basal-body rod [Ralstonia solanacearum PSI07] gi|299075376|emb|CBJ34671.1| flagellar component of cell-proximal portion of basal-body rod [Ralstonia solanacearum PSI07] Length = 245 Score = 138 bits (346), Expect = 9e-31, Method: Composition-based stats. Identities = 49/244 (20%), Positives = 93/244 (38%), Gaps = 6/244 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + L + + A+N++N+ T GF+ F V ++ D SFV Sbjct: 1 MDRMIYVAMTGAKHLFDQQAASANNLANSSTTGFKAQIDAFHTV--GVQGDGSPTRSFVM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119 + G +TG LD A++G +FA+++ G TR G F+V DG++ + SG Sbjct: 59 ASAIGTDMTPGPIETTGRSLDVAIDGQGFFAVQTADGGEAYTRAGAFQVGADGTIQTLSG 118 Query: 120 KYPVLDMASV--PIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177 + + D V P + + ++ L V++ + R G+ Sbjct: 119 QPVLGDGGPVTLPPDTTVQFAKDGTINAISADNRTPPVSLGRLKLVNIDPSNLDRGTDGL 178 Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 V + G LE SN + + MI ++++ + + + A Sbjct: 179 FRQRDGQDANVDERVRITGGALEGSNVSLTDSLVNMIEISRQLELQMKALHTGDTNAQSA 238 Query: 238 IRNI 241 + Sbjct: 239 -NEL 241 >gi|311033283|ref|ZP_07711373.1| flagellar basal-body rod protein [Bacillus sp. m3-13] Length = 273 Score = 138 bits (346), Expect = 9e-31, Method: Composition-based stats. Identities = 47/273 (17%), Positives = 95/273 (34%), Gaps = 34/273 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIK---VKFSEVVGA---------- 47 M F A ++ ++R+ +++N+SN +T G++ + F +++ Sbjct: 1 MLRGFYTATAGMISQQRRMEMMSNNLSNANTPGYKADQGSLRSFPDMLLQRMEQASGTNT 60 Query: 48 -----IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGD--------AWFALES 94 ND + + V + G TG + D A+ + + Sbjct: 61 FSPMSNPNDPVRLSTGVYLQETKPKHTQGDLRPTGNDTDLAILNQNLPENASVYFTVEQV 120 Query: 95 PRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV 154 TR+G F + +G L + SG Y + + + +I + V + G I + Sbjct: 121 DGTPRYTRNGNFSIDPEGYLTTNSGLYVLDENDN---RIQIRSRSMFVQQDGTILEGDIR 177 Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIP-----PTPLEDLSGVTVKRGFLEDSNANSMYE 209 +G+ + VR N ++ +G +E SN ++ Sbjct: 178 NTRLGIALANNPDELVREGNGLYRTAENVPLLQNAAGAPGVNYSISQGHIERSNVDTAQA 237 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 M M + F + +I + SM +A I Sbjct: 238 MSDMTAAYRAFEANQKVIQAYDMSMQKAANEIG 270 >gi|188592118|ref|YP_001796716.1| flagellar basal body rod protein flgf [Cupriavidus taiwanensis LMG 19424] gi|170938492|emb|CAP63479.1| Flagellar basal-body rod protein flgF [Cupriavidus taiwanensis LMG 19424] Length = 247 Score = 138 bits (346), Expect = 9e-31, Method: Composition-based stats. Identities = 53/246 (21%), Positives = 88/246 (35%), Gaps = 8/246 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M L+ + + + V++N++N T FR + V + +F Sbjct: 1 MDRMIYTALSGAKQILDQQAAVSNNLANVSTPAFRAQVNLYRAV--PVVGPEAGTRAFTL 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G TG LD AL+G+ W +++P TR G +V DG + + SG Sbjct: 59 ASTPGADMRAGPLTYTGRALDVALQGNGWLVVQAPDGSEAYTRAGALQVAQDGQVQTISG 118 Query: 120 KYPVLDMAS---VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + D P + +G + L V+ + R + G Sbjct: 119 LPVMGDGGPLAVPPGSQVTIGTDGTITARGPGEASAGLAQVGRLRVVNPPNDAIARSDDG 178 Query: 177 ISPNIPP-TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 + P PLE V V G LE SN N M +MI ++F +I + + Sbjct: 179 LFRLRPGAQPLEADPTVRVISGALEGSNVNPTEAMVEMIANARRFEMQMKMIQGADGNEQ 238 Query: 236 EAIRNI 241 A + Sbjct: 239 RA-NQL 243 >gi|294013086|ref|YP_003546546.1| flagellar hook protein FlgE [Sphingobium japonicum UT26S] gi|292676416|dbj|BAI97934.1| flagellar hook protein FlgE [Sphingobium japonicum UT26S] Length = 280 Score = 138 bits (346), Expect = 9e-31, Method: Composition-based stats. Identities = 47/276 (17%), Positives = 93/276 (33%), Gaps = 40/276 (14%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--ISFVAS 61 SF I L+ A + LST A+N++N ++ F+ K F ++ A + V + Sbjct: 2 SFYISLSGLKAAQTDLSTTANNVANVNSTAFKKSKAVFGDIFAAAPMQTTTQVAGQGVRT 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRFKVTDDGSLVSASG 119 G+ +T LD A+ G+ +F ++ I TR+G F V +D +V +G Sbjct: 62 QGISQQFTQGTIETTDKTLDLAITGEGFFTVKRSADDQIGYTRNGAFSVEEDRYVVDTTG 121 Query: 120 KYPV------------------------------LDMASVPIQIPQKDEIFNVGEKGEIS 149 Q+ G + Sbjct: 122 ARLQVIPLDPTTGAPTVTGTLTPASLTDLKIPTNWPDGGTGNQLTSVGVSEEGKITGVYA 181 Query: 150 QKGKV-IATMGLYSVDMSQGFVRRENSGI-SPNIPPTPL----EDLSGVTVKRGFLEDSN 203 V + + + + +G + ++ + N P+ +++ G LE SN Sbjct: 182 DGSTVYLGATAIAAFNSQEGLRQSGDAHWTATNASGAPMLGTGNSGLFGSIRSGALERSN 241 Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + E+ +I + F + + I+ + Sbjct: 242 VDITEELVNLISAQRNFQANSKAIEAANTLSTTIVN 277 >gi|34558103|ref|NP_907918.1| flagellar basal-body rod protein FlgG [Wolinella succinogenes DSM 1740] gi|34483821|emb|CAE10818.1| FLAGELLAR BASAL-BODY ROD PROTEIN FLGG [Wolinella succinogenes] Length = 277 Score = 138 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 46/274 (16%), Positives = 100/274 (36%), Gaps = 32/274 (11%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDIDQKIS 57 MQ+ + + RL +++N++N +T GF+ V F + K + + Sbjct: 1 MQSGYYSSTGGIVTQFHRLDMISNNLANANTTGFKRDDVVIGDFLRLYEQQKEPLPLEDQ 60 Query: 58 FVASGKEYLSKEVGSFISTGTELDFALEG---------------DAWFALESPRGIILTR 102 + K D ++ G +A+F +E+P GI TR Sbjct: 61 TREAAKFLNRAMDRVPSIVEEYTDRSIGGITPSENRFDFALQSENAYFMIETPEGIRYTR 120 Query: 103 DGRFKVTDDGSLVSASGKYPVLDMA-----------SVPIQIPQKDEIFNVGEKGEISQK 151 DG F + +G LV+ G + V I+ + +++ + Sbjct: 121 DGSFTLNSEGRLVTKEGFAVLPREFVQSRQYIDIPDGVVIEADRNGNLYSRTLNNDELGD 180 Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED--LSGVTVKRGFLEDSNANSMYE 209 + + + S + + + + + + + +G+LE SN N+++E Sbjct: 181 IIPLGNIAIASFENPKYLEKTGKNLYEYPQERMGERNLATNSGALVQGYLEKSNVNAVWE 240 Query: 210 MGQMIHLTQKFNSITTLIDEN-EKSMLEAIRNIA 242 M +I + + + ++ + + EAI +A Sbjct: 241 MTGLIETNRLVDMYSKVMKTHMDDLNTEAITKLA 274 >gi|134297197|ref|YP_001120932.1| flagellar basal body rod protein FlgF [Burkholderia vietnamiensis G4] gi|134140354|gb|ABO56097.1| flagellar basal-body rod protein FlgF [Burkholderia vietnamiensis G4] Length = 252 Score = 138 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 52/249 (20%), Positives = 91/249 (36%), Gaps = 9/249 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----DIDQKI 56 M + + + VA+N++NT T GFR + V + D Sbjct: 1 MDRLIYTAMTGASQSLDQQAIVANNLANTSTTGFRAQLANYRAVPMNFGDGSTIDPTTTR 60 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLV 115 ++V + G TG LD A++G W ++++ G TR G V ++G LV Sbjct: 61 TYVLASTPGADYAPGPITRTGNPLDVAVQGAGWLSVQTADGGEAYTRAGNLHVDENGQLV 120 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEK---GEISQKGKVIATMGLYSVDMSQGFVRR 172 +AS + + + + + I G V + V+ + R Sbjct: 121 NASNLPVIGNGGPISVPPNAEVTIGKDGTVSALMPGDPPTAVAMVDQMKLVNPDPTTLTR 180 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 N G+ P + V V LE SN N + M MI + F + LI ++ Sbjct: 181 GNDGLFRTADGNPADADPNVVVTPNSLEGSNVNPVTAMVAMIDNARAFQLQSKLIQTADQ 240 Query: 233 SMLEAIRNI 241 + ++ + Sbjct: 241 N-EQSANQL 248 >gi|307293787|ref|ZP_07573631.1| fagellar hook-basal body protein [Sphingobium chlorophenolicum L-1] gi|306879938|gb|EFN11155.1| fagellar hook-basal body protein [Sphingobium chlorophenolicum L-1] Length = 280 Score = 138 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 48/276 (17%), Positives = 93/276 (33%), Gaps = 40/276 (14%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--ISFVAS 61 SF I L+ A + LST A+N++N ++ F+ K F ++ A + V + Sbjct: 2 SFYISLSGLKAAQTDLSTTANNVANVNSTAFKKSKAVFGDIFAAAPMQTTTQVAGQGVRT 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRFKVTDDGSLVSASG 119 G+ +T LD A+ G+ +F ++ I TR+G F V +D +V +G Sbjct: 62 QGISQQFTQGTIETTDKTLDLAITGEGFFTVKRSADDQIGYTRNGAFSVEEDRYVVDTTG 121 Query: 120 KYPV------------------------------LDMASVPIQIPQKDEIFNVGEKGEIS 149 Q+ G + Sbjct: 122 ARLQVVPLDPTTGVPTATGTLTPASLTDLKIPTNWPDGGTGNQLTSVGVSEEGKITGVYA 181 Query: 150 QKGKV-IATMGLYSVDMSQGFVRRENSGI-SPNIPPTPL----EDLSGVTVKRGFLEDSN 203 V + + + + +G + ++ + N P+ +V+ G LE SN Sbjct: 182 DGSTVYLGATAIAAFNSQEGLRQSGDAHWTATNASGAPMLGTGNSGLFGSVRSGALERSN 241 Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + E+ +I + F + + I+ + Sbjct: 242 VDITEELVNLISAQRNFQANSKAIEAANTLSTTIVN 277 >gi|299068733|emb|CBJ39972.1| flagellar component of cell-proximal portion of basal-body rod [Ralstonia solanacearum CMR15] Length = 245 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 50/244 (20%), Positives = 92/244 (37%), Gaps = 6/244 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + L + + A+N++N+ T GF+ F V ++ D SFV Sbjct: 1 MDRMIYVAMTGAKHLFDQQAASANNLANSSTTGFKAQIDAFHTV--GVQGDGSPTRSFVM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119 + G +TG LD A++G +FA+++ G TR G F+V DG++ + SG Sbjct: 59 ASAIGTDMTPGPIETTGRSLDVAIDGQGFFAVQTADGGEAYTRAGAFQVGADGTIQTLSG 118 Query: 120 KYPVLDMASV--PIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177 + + D V P + + ++ L V + V R G+ Sbjct: 119 QPVLGDGGPVTLPPDTTVQFAKDGTINAISADNRTPPVSLGRLKLVSIDPANVDRGTDGL 178 Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 V + G LE SN + + MI ++++ + + + A Sbjct: 179 FRQRDGQDANVDERVRITGGALEGSNVSLTDSLVNMIEISRQLELQMKALHTGDTNAQSA 238 Query: 238 IRNI 241 + Sbjct: 239 -NEL 241 >gi|254446126|ref|ZP_05059602.1| conserved domain protein [Verrucomicrobiae bacterium DG1235] gi|198260434|gb|EDY84742.1| conserved domain protein [Verrucomicrobiae bacterium DG1235] Length = 250 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 63/249 (25%), Positives = 110/249 (44%), Gaps = 8/249 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV------VGAIKNDIDQ 54 M AA LE +++A N++ + T G++ + F V + + Q Sbjct: 1 MLNGVYQNAAAMTGLENWNNSIAQNIAQSSTPGYKKAMLSFEGVEAGSVGIKNSFGNTLQ 60 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGS 113 S G + GS ++T E DFALEGD +F L + G + TRDG+FK+ D G Sbjct: 61 HASIQTKGVGAVDFSSGSIVTTNGEFDFALEGDGFFELRADDGQLVYTRDGQFKMNDQGE 120 Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRE 173 LVS G + + D ++ I G + Q G+ +A M + V+ + +R Sbjct: 121 LVSKQGFHVMSDTRNIIQLI-PDGGRLQAANDGTLRQGGQKVAEMSIRGVENPEYMIRSN 179 Query: 174 NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 I + V+ G LE SN ++ EM +I++++ F +I +++ Sbjct: 180 GGFILGPNNEEAARHIEAPFVRHGSLEQSNVSATTEMINLINVSRSFQINQRVIQQHDDV 239 Query: 234 MLEAIRNIA 242 + +AI+ + Sbjct: 240 LGKAIQTLG 248 >gi|56965598|ref|YP_177332.1| flagellar basal-body rod protein [Bacillus clausii KSM-K16] gi|56911844|dbj|BAD66371.1| flagellar basal-body rod protein [Bacillus clausii KSM-K16] Length = 265 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 48/265 (18%), Positives = 96/265 (36%), Gaps = 26/265 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKN------- 50 M + LA + +A+N++N T G++ + F + ++ Sbjct: 1 MLKGLYTATSGMLAAQYHQDMLANNLANAQTPGYKAEQSVSRAFPTFLMEAQSVSKAGTV 60 Query: 51 ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFAL-------EGDAWFALESPRGIIL 100 + + V ++ + G TG D AL +FA+ + GI Sbjct: 61 QKQGLGSLATAVYLQEQQTNARQGDIQETGNTTDLALLQTGLEENNAVFFAVMTENGIRY 120 Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 TR+G +V G L +A G I E F+V E G + G+ T+ + Sbjct: 121 TRNGDLQVDSQGRLATAGGHLLQSTEGGP---IQVDSEAFSVDESGAVVVAGENRGTIEI 177 Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGV---TVKRGFLEDSNANSMYEMGQMIHLT 217 D + R + P + ++++ +E SN ++ M M+ Sbjct: 178 VLADDTNELEREGDGLYMLENGELPSAHGNPDIDFSIRQAAIERSNVDTAASMNAMLSAY 237 Query: 218 QKFNSITTLIDENEKSMLEAIRNIA 242 + F + ++ ++SM +A+ + Sbjct: 238 RLFEANQKVVQAYDQSMDKAVNEVG 262 >gi|58426791|gb|AAW75828.1| flagellar protein [Xanthomonas oryzae pv. oryzae KACC10331] Length = 280 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 57/245 (23%), Positives = 97/245 (39%), Gaps = 10/245 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + A Q STV+ N++N DTVGF+ I+ Sbjct: 30 MDKALYVAMTGARASLQAQSTVSHNLANVDTVGFKAALANTEAF--KIQGKGYPSRIDAL 87 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + G TG LD +L+ D W A++SP TR+G +T +G LV+A+G Sbjct: 88 HVDQGFDRSQGHQKVTGNPLDVSLQQDRWLAVQSPDGSEAYTRNGELALTANGQLVTANG 147 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG----LYSVDMSQGFVRRENS 175 + + + P + I +G+ TM + VD + R Sbjct: 148 HAVLDEGGNPMTIPPHQAMEIGSDGSISIIPQGEGPQTMAIVGKMKVVDAPADRLTRRPD 207 Query: 176 GISPNIPPTPLEDLSGVT---VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 G+ N P + + T + G LE SN ++ + +MI L ++F +I + Sbjct: 208 GLMRNTSTDPAQAFTVATGKTINSGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNGDD 267 Query: 233 SMLEA 237 + A Sbjct: 268 NAQSA 272 >gi|284041496|ref|YP_003391836.1| flagellar hook-basal body protein [Conexibacter woesei DSM 14684] gi|283945717|gb|ADB48461.1| flagellar hook-basal body protein [Conexibacter woesei DSM 14684] Length = 245 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 52/246 (21%), Positives = 102/246 (41%), Gaps = 8/246 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID----QKI 56 M A A +QR+ V+++++N T G++ ++V F +++ + D Sbjct: 1 MLQGLYSAAAGMAAQQQRIDGVSNDLANISTPGYKGVRVGFRDLLYNSQGDQAGETVTAG 60 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLV 115 + A+ S++ G+ ++T LD ++EG +F L G I LTRDG F++ G + Sbjct: 61 AGSAASFIGRSQQQGAVLTTDQPLDVSIEGSGFFQLRRADGGIALTRDGSFRLDPLGRVT 120 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 S+ G + D I + G+ I + L +V G ++ Sbjct: 121 SSDGLLLSPPVTVPRNT--PIDRIAIGADGTVRVNDGQQIGRIQLVTVTSPDGLRALGDN 178 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 + +G T+++G LE SN + M M++ + F + I ++ + Sbjct: 179 RFAVTPESGAATATNGATLRQGTLEGSNVDMSDAMVDMMNAQRAFQLASRAIHMQDQML- 237 Query: 236 EAIRNI 241 E + Sbjct: 238 EVANQV 243 >gi|299066527|emb|CBJ37717.1| Putative flagellar component of cell-proximal portion of basal-body rod (flgF) [Ralstonia solanacearum CMR15] Length = 254 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 61/252 (24%), Positives = 103/252 (40%), Gaps = 11/252 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDIDQKIS 57 MQ F + L++ RL VA N++N T G++ V FS VV A+ + Sbjct: 1 MQEIFAVTLSSMHQDMARLDGVALNLANVSTPGYKRGVVAVQPFSSVVDAVAGQAGARAE 60 Query: 58 FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSA 117 + + G+ TG +D AL GD +F + +P G TR G F+ G LV+A Sbjct: 61 DMNGVQVMSDMRPGTVKLTGEPMDVALAGDGFFEVTTPSGPAYTRQGNFRTDAMGRLVTA 120 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK-------VIATMGLYSVDMSQGFV 170 G + + + + G IA + + D + Sbjct: 121 QGYPVMGKNGEIFLTTQTPVVDAAGNVTEPNATTGPSAISPRTPIAQIKVVKFDTPKTLQ 180 Query: 171 RRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 R G+ + + D + V +++G LE+ N +SM EM Q+I + F S+ + Sbjct: 181 R-LGEGLMASGTGMTVVDDANVQIRQGALENGNVSSMQEMMQLIQTMRHFESVQKVTQGY 239 Query: 231 EKSMLEAIRNIA 242 ++ + AIR + Sbjct: 240 DEMIGTAIRKLG 251 >gi|17548567|ref|NP_521907.1| flagellar basal-body rod protein FlgF [Ralstonia solanacearum GMI1000] gi|17430815|emb|CAD17497.1| probable flagellar basal-body rod protein flgf [Ralstonia solanacearum GMI1000] Length = 245 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 50/244 (20%), Positives = 92/244 (37%), Gaps = 6/244 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + L + + A+N++N+ T GF+ F V ++ D SFV Sbjct: 1 MDRMIYVAMTGAKHLFDQQAASANNLANSSTTGFKAQIDAFHTV--GVQGDGSPTRSFVM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119 + G +TG LD A++G +FA+++ G TR G F+V DG++ + SG Sbjct: 59 ASAIGTDMTPGPIETTGRSLDVAIDGQGFFAVQTADGGEAYTRAGAFQVGADGTIQTLSG 118 Query: 120 KYPVLDMASV--PIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177 + + D V P + + ++ L V + V R G+ Sbjct: 119 QPVLGDGGPVTLPPDTTVQFAKDGTINAISADNRTPPVSLGRLKLVSIDPSNVDRGTDGL 178 Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 V + G LE SN + + MI ++++ + + + A Sbjct: 179 FRQRDGQDANVDERVRITGGALEGSNVSLTDSLVNMIEISRQLELQMKALHTGDTNAQSA 238 Query: 238 IRNI 241 + Sbjct: 239 -NEL 241 >gi|56460251|ref|YP_155532.1| flagella basal body rod protein [Idiomarina loihiensis L2TR] gi|56179261|gb|AAV81983.1| Flagella basal body rod protein [Idiomarina loihiensis L2TR] Length = 247 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 44/241 (18%), Positives = 95/241 (39%), Gaps = 7/241 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + ++ ++ A+N++N +T F+ + + + F Sbjct: 1 MDKMLWVAMSGAKENMNAVAVRANNLANANTTAFKGDLQQARAM--QAFGEGLPTRVFSM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + G+ +TG +D A++ W A++ TR+G +V DG L +++G Sbjct: 59 TESPGQNFASGAIQTTGRNMDVAIKDQGWIAVDDGSGNERYTRNGSLEVGTDGLLKNSTG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS----VDMSQGFVRRENS 175 + + + + + +P + + I G M + V+ G + + N Sbjct: 119 QTVLGNNGPIFVPMPIDNLVIGANGNVSIRPMGAPANAMEVIDRIKLVNPPNGNMEKGND 178 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 G+ + V ++ G LE SN NS+ EM MI L +++ L+ +++ Sbjct: 179 GLFKLKDDQQAFADANVKLQIGALEGSNVNSVEEMTHMIALQRQYEMNVKLMKTADENAQ 238 Query: 236 E 236 Sbjct: 239 R 239 >gi|51894143|ref|YP_076834.1| flagellar basal body and hook proteins [Symbiobacterium thermophilum IAM 14863] gi|51857832|dbj|BAD41990.1| flagellar basal body and hook proteins [Symbiobacterium thermophilum IAM 14863] Length = 231 Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 47/254 (18%), Positives = 85/254 (33%), Gaps = 37/254 (14%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51 M + + R +ADN++N +T GF+ +F ++ D Sbjct: 1 MIRGIEASRSGMAVEQLRTDVLADNIANMNTSGFKRATATSVEFDRMLIHRMGDPTDPRS 60 Query: 52 --IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKV 108 + + + + + G TG LD ALEG WF + P G + TR+G F+ Sbjct: 61 QEVGTLGNGSRVDQVVVDERQGDIYETGRALDLALEGPGWFLAQRPDGSLYRTRNGAFRQ 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 DG++ +A G +++ + + G I G I + L Sbjct: 121 MADGTITTAEGYRVLMEAPGGLVPLVVPGVEPTFQADGTILADGMPIGRLALADAAPETR 180 Query: 169 FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228 R LE SN + EM +I + + + Sbjct: 181 LHSRR-------------------------LEASNVDLAKEMTDLIVTLRAYQVNQRALR 215 Query: 229 ENEKSMLEAIRNIA 242 ++++ A+ I Sbjct: 216 VQDETLARAVTEIG 229 >gi|224417700|ref|ZP_03655706.1| flagellar basal-body rod protein FlgG [Helicobacter canadensis MIT 98-5491] gi|253827049|ref|ZP_04869934.1| flagellar distal rod protein FlgF [Helicobacter canadensis MIT 98-5491] gi|313141243|ref|ZP_07803436.1| flagellar basal-body rod protein flgg [Helicobacter canadensis MIT 98-5491] gi|253510455|gb|EES89114.1| flagellar distal rod protein FlgF [Helicobacter canadensis MIT 98-5491] gi|313130274|gb|EFR47891.1| flagellar basal-body rod protein flgg [Helicobacter canadensis MIT 98-5491] Length = 277 Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 57/275 (20%), Positives = 108/275 (39%), Gaps = 32/275 (11%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDID---- 53 MQ + + + RL +A+N++N +T GF+ V F + K + Sbjct: 1 MQGGYYSSVGGMVTQINRLDVIANNIANANTTGFKRDDVVIGDFMRLYEQHKEFLPIKDQ 60 Query: 54 ----------QKISFVASGKEYLSKEVGSFISTGTELDFAL-EGDAWFALESPRGIILTR 102 +E+ + VG T DFAL +A+F +E+P GI TR Sbjct: 61 TKDAAKFYNRSLNRVPQIVEEFTDRSVGGITQTDNTFDFALSRENAYFMIETPEGIRFTR 120 Query: 103 DGRFKVTDDGSLVSASGKYPVLDMA-----------SVPIQIPQKDEIFNVGEKGEISQK 151 DG F + +G LV+ G + I++ + ++N E + Sbjct: 121 DGSFVLNQEGRLVNKEGYAVLPREYIESPQYIEIIDGFQIEVDKDGNLYNRSLNNEELNE 180 Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL--SGVTVKRGFLEDSNANSMYE 209 + A + + S + + + ++ ++ V++G+LE SN N +YE Sbjct: 181 TILTANIAVVSFENPKFLQKIGDNLYKYPNERMNEMEVLERSGAVRQGYLEKSNINVVYE 240 Query: 210 MGQMIHLTQKFNSITTLIDEN-EKSMLEAIRNIAS 243 M +I + + + ++ + + EAI IA+ Sbjct: 241 MTGLIETNRLVEAYSKVLKTHMDDLNTEAITRIAA 275 >gi|312882658|ref|ZP_07742395.1| flagellar basal body rod protein FlgF [Vibrio caribbenthicus ATCC BAA-2122] gi|309369619|gb|EFP97134.1| flagellar basal body rod protein FlgF [Vibrio caribbenthicus ATCC BAA-2122] Length = 248 Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 57/241 (23%), Positives = 98/241 (40%), Gaps = 12/241 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + ++ Q L A+N++N T GFR + + + F Sbjct: 1 MDRALFLAMSGAKQNMQALQLRANNLANVSTTGFRADLEQARSM--QAYGEGLPTRVFSM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASG 119 + + + GS I+TG +LD +EG W ++ + LTR+G K+ +G L+S G Sbjct: 59 TERPGQNFRQGSVITTGRDLDVTIEGLGWISVLDKTGKEGLTRNGNLKIDSNGLLLS--G 116 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172 + VL S PI +P +G G IS + + VD ++ + Sbjct: 117 ENLVLGEGSDPITLPIPLSKVEIGSDGTISVVPQGAPADAIEIVDRIKLTNTDNRSLFKD 176 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 N P E V + +G +E SN +++ EM +I L ++F L+ E Sbjct: 177 INGLFRSKDPNAQYEIDGNVKLLKGAIEGSNVSAIGEMTSLIDLQRQFEMQVKLMSTAED 236 Query: 233 S 233 Sbjct: 237 M 237 >gi|242309753|ref|ZP_04808908.1| flagellar basal-body rod protein flgg [Helicobacter pullorum MIT 98-5489] gi|239523754|gb|EEQ63620.1| flagellar basal-body rod protein flgg [Helicobacter pullorum MIT 98-5489] Length = 277 Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 55/275 (20%), Positives = 107/275 (38%), Gaps = 32/275 (11%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDID---- 53 MQ F + + RL +A+N++N +T GF+ V F + K + Sbjct: 1 MQGGFYSSVGGMVTQINRLDVIANNIANANTTGFKRDDVVIGDFMRLYEQHKEFLPIEDQ 60 Query: 54 ----------QKISFVASGKEYLSKEVGSFISTGTELDFAL-EGDAWFALESPRGIILTR 102 +E+ + G + T DFAL +A+F +E+P GI +R Sbjct: 61 TKDAAKFYNRSLNRVPQIVEEFTDRSAGGVVQTENTFDFALSRENAYFMIETPEGIRFSR 120 Query: 103 DGRFKVTDDGSLVSASGKYPVLDMA-----------SVPIQIPQKDEIFNVGEKGEISQK 151 DG F + ++G LV+ G + +++ I+N E + Sbjct: 121 DGSFVLNEEGRLVNKEGYAVLPREYIESPQYIDFVDGFQVEVDSDGNIYNRSLTNEELDE 180 Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL--SGVTVKRGFLEDSNANSMYE 209 + + + S + + + ++ ++ V++GFLE SN N +YE Sbjct: 181 ALLGGNIAVVSFENPKFLQKVGDNLYKYPEERMNEMEVLERSGAVRQGFLEKSNINVVYE 240 Query: 210 MGQMIHLTQKFNSITTLIDEN-EKSMLEAIRNIAS 243 M +I + + + ++ + + EAI +A+ Sbjct: 241 MTGLIETNRLVEAYSKVLKTHMDDLNTEAITRLAA 275 >gi|292489132|ref|YP_003532019.1| flagellar basal-body rod protein FlgF [Erwinia amylovora CFBP1430] gi|292900251|ref|YP_003539620.1| flagellar basal-body rod protein [Erwinia amylovora ATCC 49946] gi|291200099|emb|CBJ47225.1| flagellar basal-body rod protein [Erwinia amylovora ATCC 49946] gi|291554566|emb|CBA22179.1| Flagellar basal-body rod protein flgF [Erwinia amylovora CFBP1430] gi|312173290|emb|CBX81545.1| Flagellar basal-body rod protein flgF [Erwinia amylovora ATCC BAA-2158] Length = 245 Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 51/245 (20%), Positives = 88/245 (35%), Gaps = 8/245 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + ++A A R + ++NM+N T GFR F V ++ + + V Sbjct: 1 MDRAIYTAMSAANAALNRQAVTSNNMANAATTGFRAQMAAFRAV--PVEGETIATRALVV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 Y +G TG LD AL + W A+ P TR+G +V DG +S +G Sbjct: 59 DSTPYHDGTMGPLNHTGRSLDVALPQNGWLAVAMPDGTEAYTRNGAIEVDRDG-ALSVNG 117 Query: 120 KYPVLDM---ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + D P + G V L + S + + G Sbjct: 118 YPLMGDGAPLTVPPQSAVTIAPDGTLTALGAGDDPTTVTPVGRLKLANASIQDLLHGDEG 177 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + L + + + LE SN + + M +MI + F+ I +++ + Sbjct: 178 LFHPKAGDSLPADAALRLSPETLEGSNVSPVKAMTEMIATARSFDMNMKTIRTADENAKQ 237 Query: 237 AIRNI 241 A + Sbjct: 238 A-NQL 241 >gi|21231396|ref|NP_637313.1| flagellar basal body rod protein FlgF [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66768551|ref|YP_243313.1| flagellar basal body rod protein FlgF [Xanthomonas campestris pv. campestris str. 8004] gi|21113062|gb|AAM41237.1| flagellar protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66573883|gb|AAY49293.1| flagellar protein [Xanthomonas campestris pv. campestris str. 8004] Length = 251 Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 58/245 (23%), Positives = 97/245 (39%), Gaps = 10/245 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + A Q STV+ N++N DTVGF+ I+ Sbjct: 1 MDKALYVAMTGARASLQAQSTVSHNLANVDTVGFKAALANTEAF--QIRGKGYPSRIDAL 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + G TG LD +L+ D W A++SP TR+G +T +G LV+A+G Sbjct: 59 HVDQGFDRSQGHQKVTGNPLDVSLQQDRWLAVQSPDGSEAYTRNGELALTANGQLVTANG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG----LYSVDMSQGFVRRENS 175 + + + P + I +G+ TM + VD + R Sbjct: 119 HAVLDEGGNPMTIPPHQAMEIGSDGSISIIPQGEGPQTMAIVGKMKVVDAPADRLMRRPD 178 Query: 176 GISPNIPPTPLEDLSGVT---VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 G+ N P + + T V G LE SN ++ + +MI L ++F +I + Sbjct: 179 GLMRNTSTDPAQAFAVATGKTVNSGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNGDD 238 Query: 233 SMLEA 237 + A Sbjct: 239 NAQSA 243 >gi|171059411|ref|YP_001791760.1| flagellar basal-body rod protein FlgF [Leptothrix cholodnii SP-6] gi|170776856|gb|ACB34995.1| flagellar basal-body rod protein FlgF [Leptothrix cholodnii SP-6] Length = 241 Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 54/242 (22%), Positives = 95/242 (39%), Gaps = 5/242 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A QR T+A+N++N TVGFR F V ++ D ++ Sbjct: 1 MDRRIYLSMGGAKATMQRQETLANNLANVSTVGFRAEMQAFRAV--PVRGDGATTRAYAL 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119 + G+ +TG LD A++G+ W A++S TR G V DG LV ++G Sbjct: 59 ETTTGYNPAQGNITATGRNLDVAMQGNGWLAVQSLDGTEAYTRAGALNVMPDGLLVGSNG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 + D + + + +I G + G + L V R ++ Sbjct: 119 LPVLGDGGPITLPANAEVQIAGDGTISARAANGGITPVGKLKLVTPEAPLKRGDDGLFRA 178 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 P ++ G LE SN +++ M MI ++F + E+ +A + Sbjct: 179 ADGDLP--ADPNARLQDGALEGSNVSAIETMVAMISAARQFEQQMKSMQTTEQDEKQAAQ 236 Query: 240 NI 241 + Sbjct: 237 LL 238 >gi|296283227|ref|ZP_06861225.1| flagellar basal-body rod protein FlgF [Citromicrobium bathyomarinum JL354] Length = 248 Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 54/247 (21%), Positives = 101/247 (40%), Gaps = 7/247 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---DIDQKIS 57 M S + L+ + AL +R+ VA+N++NT TVGFR + F E V D + S Sbjct: 1 MDISSYVLLSQEQALRRRMDIVANNLANTSTVGFRREQPMFREYVERADEAIIDDAKPTS 60 Query: 58 FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR--GIILTRDGRFKVTDDGSLV 115 FV + +G+F TG LD ++G + A+E P G TR G V + G L Sbjct: 61 FVLDLRAIHDTSLGAFQPTGNPLDVMIDGPGYLAVELPDGAGTAYTRAGFVSVLETGELA 120 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 +A G+ + + + P++ ++ G + + + + D G + + Sbjct: 121 TAGGQRLLDEGGQPIVVPPEEVGRVSIAADGSVMGANGALGRLAVTVFDDETGLAPKGDG 180 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 + + ++ G +E SN + E MI + + + + + + Sbjct: 181 LYAGAEGR--VLPAEETKLRSGGVEGSNVQPIVETTAMIDILRSYQNSVRMTESLNDMRK 238 Query: 236 EAIRNIA 242 A+ + Sbjct: 239 RALDRLG 245 >gi|307823532|ref|ZP_07653761.1| flagellar basal-body rod protein FlgF [Methylobacter tundripaludum SV96] gi|307735517|gb|EFO06365.1| flagellar basal-body rod protein FlgF [Methylobacter tundripaludum SV96] Length = 246 Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 46/238 (19%), Positives = 94/238 (39%), Gaps = 7/238 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M S I ++ + A+N++NT T GF++ +F + + Sbjct: 1 MDRSLYIAMSGAKQTLLAQTANANNLANTQTSGFKSDLEQFRS--RPVSGAGFPTRVYAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASG 119 + K + G+ +TG +LD A+ G+ + A++ + TR G +VT +G L + +G Sbjct: 59 NEKPGVDLSTGAMQTTGGDLDVAINGEGYLAVQGADGKEAYTRAGDLRVTPEGFLQTGAG 118 Query: 120 KYPVLDM----ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 + ++ + + + V + G + + N Sbjct: 119 LKVLGQDGPINIPPSEKLSIGSDGTISIIPLGSGNATTQVEIGRIKMVKLEAGNLEKSND 178 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 G+ P+ + V + +G LE SN N++ M MI L + F T ++ +++ Sbjct: 179 GLLHAKDGKPVVANADVKLAQGVLEGSNVNAISAMVDMIELARNFELQTKVMKSFDEN 236 >gi|259418017|ref|ZP_05741936.1| flagellar basal-body rod protein FlgF [Silicibacter sp. TrichCH4B] gi|259346923|gb|EEW58737.1| flagellar basal-body rod protein FlgF [Silicibacter sp. TrichCH4B] Length = 238 Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 69/241 (28%), Positives = 115/241 (47%), Gaps = 6/241 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + L+ Q L + VA+N++N+ T G+R+ + FSE V + + +S Sbjct: 1 MGSIGYTTLSRQSGLLNEMQAVANNIANSATTGYRSEGLIFSEYVKSAPGQ--ESLSMGR 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + S E G+ T D A+EGD +F +E+P G LTR G F +G LV+A G Sbjct: 59 ANIRNTSLEQGTMSQTNGSFDLAIEGDGFFMVETPAGNRLTRAGNFTPNAEGDLVTADGY 118 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 LD P+ +P E + G G +S G+ + +GL+ D +R + Sbjct: 119 RV-LDAGQAPMFVPGDAESISFGADGTLSADGQQLGQIGLFVPDEEAQILREDGVMFRVE 177 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 P E V +GFLE SN N+++++ +MI + + + + +D +K + AI N Sbjct: 178 GETLPAEG---AQVLQGFLEGSNVNTIHQLARMIEVQRAYEMGQSFLDNEDKRIRAAIDN 234 Query: 241 I 241 + Sbjct: 235 L 235 >gi|209521590|ref|ZP_03270288.1| flagellar basal-body rod protein FlgF [Burkholderia sp. H160] gi|209497973|gb|EDZ98130.1| flagellar basal-body rod protein FlgF [Burkholderia sp. H160] Length = 252 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 52/249 (20%), Positives = 98/249 (39%), Gaps = 9/249 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI----DQKI 56 M ++ ++ + VA+N++N T GFR + V + + D Sbjct: 1 MDRLIYTAMSGSAQALEQQAIVANNLANASTTGFRAQLETYRAVPMSFGDGSTINDDTTR 60 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLV 115 +FV S G TG LD A++G W ++++ TR G + ++G LV Sbjct: 61 TFVLSSTPGADYTPGPIQQTGNPLDVAIQGPGWLSVQTADGNEAYTRAGNLHIDENGQLV 120 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRR 172 +A+ + + + V + + I G ++ A + + V+ + R Sbjct: 121 NATNQVVLGNGGPVSVPPGAQITIGKDGTVSALTPGDPPTAVVTVDQLKLVNPDPQTLTR 180 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 + G+ P + VT+ LE SN N + M MI ++F T L++ +K Sbjct: 181 SDDGLFRTADGNPADADPTVTLAPASLEGSNVNPVNAMVSMITNARQFQMQTQLLENADK 240 Query: 233 SMLEAIRNI 241 + A + Sbjct: 241 NDQSA-NQL 248 >gi|299538000|ref|ZP_07051286.1| flagellar basal-body rod protein [Lysinibacillus fusiformis ZC1] gi|298726582|gb|EFI67171.1| flagellar basal-body rod protein [Lysinibacillus fusiformis ZC1] Length = 277 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 55/278 (19%), Positives = 105/278 (37%), Gaps = 39/278 (14%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVV------------ 45 M F + ++R + +N+SN +T GF+ + F +++ Sbjct: 1 MFKGFYTVATGMITQQRRTELLTNNLSNANTPGFKADQSTIRSFPDMLMSSIGKTNAPAH 60 Query: 46 ----GAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFAL------------EGDAW 89 + + + + + G +T D AL G + Sbjct: 61 QQAGAEYMSQVGALNTGTYLQETLPNYIQGQIYNTDFTTDMALINGNLPQNEDGVTGSIF 120 Query: 90 FALESPRG-IILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI 148 F LE P G TR+G F + G LV+ G Y + D +I ++ F + E G I Sbjct: 121 FRLEHPAGGEAYTRNGNFTLDGQGYLVNGQGLYVLNDAGQ---RIQLPNDDFRLDESGAI 177 Query: 149 SQKGKVIATMGLYSVDMSQGFVRRENSGISP----NIPPTPLEDLSGVTVKRGFLEDSNA 204 + +A +G+ +++N I N+P + T+++ FLE SN Sbjct: 178 FVNNQQVARVGVSFATNPNMLQKQDNGLIRTENGENLPTAYGANGVSFTLRQNFLEGSNV 237 Query: 205 NSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 +S M ++ + F + ++ ++SM +A+ I Sbjct: 238 DSGRTMTDLMTAYRAFEANQKVLQAYDRSMEKAVNEIG 275 >gi|56695101|ref|YP_165448.1| flagellar basal body rod protein FlgF [Ruegeria pomeroyi DSS-3] gi|56676838|gb|AAV93504.1| flagellar basal-body rod protein FlgF [Ruegeria pomeroyi DSS-3] Length = 216 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 56/220 (25%), Positives = 105/220 (47%), Gaps = 6/220 (2%) Query: 22 VADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELD 81 +A+N++N+ T G+R + FSE V +S S+E G TG + D Sbjct: 1 MANNIANSATSGYRQQGLVFSEFVR--GGLGTSSLSMARGQVRNTSQEQGVLTQTGGDFD 58 Query: 82 FALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFN 141 A++G+ +F LE+P G LTR G F G LV+ G +D PI +P + Sbjct: 59 LAIDGEGFFMLETPGGERLTRAGSFTPNAQGDLVNPDGYRL-IDANGAPIFVPPDIDGVR 117 Query: 142 VGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLED 201 +G G IS G+++ +GL+ G +R + P+E ++ +GFLE Sbjct: 118 IGPDGTISGAGRLLGQIGLFKPVDPHGLIREGGVFFRADDGTEPIEG---ASIMQGFLEG 174 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 SN N++ ++ +++ + + + + + ++ + A+ ++ Sbjct: 175 SNVNAIDQVARLVEVQRAYELGQSFLQAEDERIRNAVNSL 214 >gi|289666048|ref|ZP_06487629.1| flagellar basal body rod protein FlgF [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 251 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 57/245 (23%), Positives = 97/245 (39%), Gaps = 10/245 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + A Q STV+ N++N DTVGF+ I+ Sbjct: 1 MDKALYVAMTGARASLQAQSTVSHNLANVDTVGFKAALANTEAF--KIQGKGYPSRIDAL 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + G TG LD +L+ D W A++SP TR+G +T +G LV+A+G Sbjct: 59 HVDQGFDRSQGHQKVTGNPLDVSLQQDRWLAVQSPDGSEAYTRNGELALTANGQLVTANG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG----LYSVDMSQGFVRRENS 175 + + + P + I +G+ TM + VD + R Sbjct: 119 HAVLDEGGTPMTIPPHQAMEIGSDGSISIIPQGEGPQTMAIVGKMKVVDAPADRLTRRPD 178 Query: 176 GISPNIPPTPLEDLSGVT---VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 G+ N P + + T + G LE SN ++ + +MI L ++F +I + Sbjct: 179 GLMRNTSTDPAQAFAVATGKTINSGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNGDD 238 Query: 233 SMLEA 237 + A Sbjct: 239 NAQSA 243 >gi|99082801|ref|YP_614955.1| flagellar basal body rod protein FlgF [Ruegeria sp. TM1040] gi|99039081|gb|ABF65693.1| Flagellar basal-body rod protein flgG [Ruegeria sp. TM1040] Length = 238 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 68/241 (28%), Positives = 116/241 (48%), Gaps = 6/241 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + L+ Q L + VA+N++N+ T G+R+ + FSE V + + +S Sbjct: 1 MGSIGYTTLSRQSGLLNEMQAVANNIANSATTGYRSEGLIFSEYVKSAPGQ--ESLSMGR 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + S E G+ T D A+EG+ +F +E+P G LTR G F +G LV+A G Sbjct: 59 ANIRNTSLEQGTMNQTNGTFDLAIEGEGFFMVETPAGNRLTRAGNFTPNAEGDLVTADGY 118 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 LD P+ +P E + G G +S G+ + +GL+ D +R + Sbjct: 119 RV-LDAGQAPMFVPGGAESISFGADGTLSADGQQLGQIGLFVPDEDAQILREDGVMFRVE 177 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 P +G V +GFLE SN N+++++ +MI + + + + +D +K + AI N Sbjct: 178 GETLP---AAGAQVLQGFLEGSNVNTIHQLARMIEVQRAYEMGQSFLDHEDKRIRSAIDN 234 Query: 241 I 241 + Sbjct: 235 L 235 >gi|170694393|ref|ZP_02885547.1| flagellar basal-body rod protein FlgF [Burkholderia graminis C4D1M] gi|170140816|gb|EDT08990.1| flagellar basal-body rod protein FlgF [Burkholderia graminis C4D1M] Length = 252 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 54/249 (21%), Positives = 97/249 (38%), Gaps = 9/249 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI----DQKI 56 M ++ ++ + VA+N++N T GFR F V + + + Sbjct: 1 MDRLIYTAMSGSTQALEQQAIVANNLANASTTGFRAQLATFRAVPMSFGDGSSINDNTTR 60 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLV 115 +FV S G TG LD A+EG W A+++ TR G V +G LV Sbjct: 61 TFVLSSTPGADYTPGPIQQTGNPLDVAIEGPGWLAVQTADGNEAYTRAGNLHVDQNGQLV 120 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRR 172 +A+ + + + + + + I + G ++ A + + V+ + R Sbjct: 121 NATNQVVLGNGGPISVPPGAQITIGHDGTVTALTPGDPPTAVVTIDQLKLVNPDPQTLTR 180 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 + G+ P + V V LE SN N + M MI ++F T L++ +K Sbjct: 181 GDDGLFRTADGNPADADPAVAVAPASLEGSNVNPVSAMVSMITNARQFQMQTKLLESADK 240 Query: 233 SMLEAIRNI 241 + A + Sbjct: 241 NDQSA-NQL 248 >gi|78047585|ref|YP_363760.1| flagellar basal body rod protein FlgF [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78036015|emb|CAJ23706.1| flagella basal body rod protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 251 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 58/245 (23%), Positives = 97/245 (39%), Gaps = 10/245 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + A Q STV+ N++N DTVGF+ I+ Sbjct: 1 MDKALYVAMTGARASLQAQSTVSHNLANVDTVGFKAALANTEAF--KIQGKGYPSRIDAL 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + G TG LD +L+ D W A++SP TR+G +T +G LV+A+G Sbjct: 59 HVDQGFDRSQGHQKVTGNPLDVSLQQDRWLAVQSPDGSEAYTRNGELALTANGQLVTANG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG----LYSVDMSQGFVRRENS 175 + + + P + I +G+ TM + VD + R Sbjct: 119 HAVLDEGGNPMTIPPHQAMEIGSDGSISIIPQGEGPQTMAIVGKMKVVDAPADRLTRRPD 178 Query: 176 GISPNIPPTPLEDLSGVT---VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 G+ N P + + T V G LE SN ++ + +MI L ++F +I + Sbjct: 179 GLMRNTSTDPAQAFAVATSKTVNSGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNGDD 238 Query: 233 SMLEA 237 + A Sbjct: 239 NAQSA 243 >gi|32266589|ref|NP_860621.1| flagellar distal rod protein FlgG [Helicobacter hepaticus ATCC 51449] gi|32262640|gb|AAP77687.1| flagellar distal rod protein FlgG [Helicobacter hepaticus ATCC 51449] Length = 277 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 53/274 (19%), Positives = 106/274 (38%), Gaps = 32/274 (11%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 MQ+ + + RL +++N++N +T GF+ V + + + +Q Sbjct: 1 MQSGYYNTTGGMVTQFNRLDLISNNLANLNTTGFKRDDVVIGDYLRLFETHKEQLPIEDH 60 Query: 61 SGK-----------------EYLSKEVGSFISTGTELDFAL-EGDAWFALESPRGIILTR 102 + K EY + +GS T LDFAL +A+F +++P GI TR Sbjct: 61 TRKAAKFLNRTMDRVPIISEEYTDRSIGSLAQTDNTLDFALQHQNAFFVVKTPDGIRYTR 120 Query: 103 DGRFKVTDDGSLVSASG-----------KYPVLDMASVPIQIPQKDEIFNVGEKGEISQK 151 DG F + DG +VS G + + ++ ++ + + Sbjct: 121 DGNFHIDADGHIVSKEGHLVLSRDGLEEGEGISVPTGMHLESDNSGNLYLRNINNDAIAE 180 Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED--LSGVTVKRGFLEDSNANSMYE 209 I + + + + + + D + + +GFLE SN N++ E Sbjct: 181 QINIGALAVVGFENPRYLKKVGKNFYEYPEERLEERDILQNNGIIAQGFLEKSNVNAVQE 240 Query: 210 MGQMIHLTQKFNSITTLIDEN-EKSMLEAIRNIA 242 M +I + + + ++ + ++ EAI +A Sbjct: 241 MTSLIETNRLVDMYSKVMKSHMDELNAEAITKLA 274 >gi|84624089|ref|YP_451461.1| flagellar basal body rod protein FlgF [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|161898986|ref|YP_201213.2| flagellar basal body rod protein FlgF [Xanthomonas oryzae pv. oryzae KACC10331] gi|84368029|dbj|BAE69187.1| flagellar protein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 251 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 57/245 (23%), Positives = 97/245 (39%), Gaps = 10/245 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + A Q STV+ N++N DTVGF+ I+ Sbjct: 1 MDKALYVAMTGARASLQAQSTVSHNLANVDTVGFKAALANTEAF--KIQGKGYPSRIDAL 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + G TG LD +L+ D W A++SP TR+G +T +G LV+A+G Sbjct: 59 HVDQGFDRSQGHQKVTGNPLDVSLQQDRWLAVQSPDGSEAYTRNGELALTANGQLVTANG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG----LYSVDMSQGFVRRENS 175 + + + P + I +G+ TM + VD + R Sbjct: 119 HAVLDEGGNPMTIPPHQAMEIGSDGSISIIPQGEGPQTMAIVGKMKVVDAPADRLTRRPD 178 Query: 176 GISPNIPPTPLEDLSGVT---VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 G+ N P + + T + G LE SN ++ + +MI L ++F +I + Sbjct: 179 GLMRNTSTDPAQAFTVATGKTINSGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNGDD 238 Query: 233 SMLEA 237 + A Sbjct: 239 NAQSA 243 >gi|294625275|ref|ZP_06703914.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292600449|gb|EFF44547.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 251 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 57/245 (23%), Positives = 96/245 (39%), Gaps = 10/245 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + A Q STV+ N++N DTVGF+ I+ Sbjct: 1 MDKALYVAMTGARASLQAQSTVSHNLANVDTVGFKAALANTEAF--KIQGKGYPSRIDAL 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + G TG LD +L+ D W A++SP TR+G +T +G LV+A+G Sbjct: 59 HVDQGFDRSQGHQKVTGNPLDVSLQQDRWLAVQSPDGSEAYTRNGELALTANGQLVTANG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG----LYSVDMSQGFVRRENS 175 + + P + I +G+ TM + VD + R Sbjct: 119 HAVQDEGGNPMTIPPHQAMEIGSDGSISIIPQGEGPQTMAIVGKMKVVDAPADRLTRRPD 178 Query: 176 GISPNIPPTPLEDLSGVT---VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 G+ N P + + T + G LE SN ++ + +MI L ++F +I + Sbjct: 179 GLMRNTSTDPAQAFAVATGKTINSGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNGDD 238 Query: 233 SMLEA 237 + A Sbjct: 239 NAQSA 243 >gi|226944493|ref|YP_002799566.1| flagellar basal-body rod protein [Azotobacter vinelandii DJ] gi|226719420|gb|ACO78591.1| flagellar basal-body rod protein [Azotobacter vinelandii DJ] Length = 251 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 51/245 (20%), Positives = 89/245 (36%), Gaps = 10/245 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M ++ + + VA N++N T GFR ++ V + + V Sbjct: 1 MDRMLFTAMSGAKQSLDQQAVVAHNLANAVTPGFRAQLMELQAV--PVDGEGLPTRVSVR 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSA-- 117 + + G TG LD AL+G+AW A+++ TR G ++ +G + A Sbjct: 59 ATTSGVDFSQGPVTRTGRPLDVALDGNAWLAIQAADGSEAYTRRGDVQIDGNGLMTVAGH 118 Query: 118 --SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 G L + D +V E+G+ V+A + L S + + Sbjct: 119 PLIGDGGPLTVPLGSQVSIGADGTVSVVEEGQDPDTSAVVARLKLVSAAPGELERGEDGL 178 Query: 176 GISPNIP---PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 +P PL + G LE SN ++ M MI +++ ID + Sbjct: 179 FRAPPDDTGVSQPLAVDETARLVTGALEGSNVSATEAMVAMIDNARRYEMQMKAIDSADD 238 Query: 233 SMLEA 237 + A Sbjct: 239 NAQRA 243 >gi|126668559|ref|ZP_01739513.1| Flagellar basal body rod protein [Marinobacter sp. ELB17] gi|126626964|gb|EAZ97607.1| Flagellar basal body rod protein [Marinobacter sp. ELB17] Length = 250 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 48/249 (19%), Positives = 97/249 (38%), Gaps = 10/249 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + IG++ A+N++N T GF+ + + + ++ Sbjct: 1 MDKALYIGMSGAKQNMLAQRAHANNLANVTTTGFKKDFAQARSM--PVFGGHHPTRAYAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESP-RGIILTRDGRFKVTDDGSLVSASG 119 + + G+ + TG +LD A+EGD+W A+++ + TR G ++ +G L A+G Sbjct: 59 TERPGTDLSSGALMETGRKLDVAIEGDSWLAVQNNLGEEVFTRSGSLQIDVNGLLRLANG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV---IATMGLYSVDMSQGFVRRENSG 176 + + + V + EI G + G + L V + + G Sbjct: 119 EMVLGNGGPVALPPFDNVEIGADGTVSIVPVGGPPDQLVEVDRLKLVTPPTQALEKGPDG 178 Query: 177 ISP----NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 + V GFLE SN N++ EM + L++++ ++ ++ Sbjct: 179 FIRRKPDQALGGGEPADANARVSGGFLESSNVNAVAEMISNLQLSRQYEMQVKVMSTAKE 238 Query: 233 SMLEAIRNI 241 + A R + Sbjct: 239 NSEAAARLL 247 >gi|238782793|ref|ZP_04626822.1| Flagellar basal-body rod protein flgF [Yersinia bercovieri ATCC 43970] gi|238716216|gb|EEQ08199.1| Flagellar basal-body rod protein flgF [Yersinia bercovieri ATCC 43970] Length = 251 Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats. Identities = 54/251 (21%), Positives = 88/251 (35%), Gaps = 11/251 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A A R ++N++N T GFR F V I + + V Sbjct: 1 MDRAIYTAMGAANAALNRQGVTSNNLANASTTGFRAQLSAFRAV--PINGPSVETRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDG-SLVSAS 118 Y +G+ TG LD AL D W A+E G TR G + +G V+ Sbjct: 59 ESTPYHDDSMGTINQTGRNLDVALPQDGWLAVELLGGGEAYTRAGNIDIDSEGLLRVNGR 118 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS--- 175 +VP Q ++ +A +G + ++ R Sbjct: 119 AVLGDGGPINVPPQAELTIAPDGTITALGAGEEPSALAQVGRLKLVNARLQDLRHGDDGL 178 Query: 176 ----GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 SPN L + + G LE SN + + M MI + F+ +I + Sbjct: 179 FHIAETSPNAGLMALPADQSLQLAPGALESSNVSPVKSMVDMIATARGFDMNIKVISAVD 238 Query: 232 KSMLEAIRNIA 242 + +A + +A Sbjct: 239 DNEKKANQLLA 249 >gi|289548727|ref|YP_003473715.1| fagellar hook-basal body protein [Thermocrinis albus DSM 14484] gi|289182344|gb|ADC89588.1| fagellar hook-basal body protein [Thermocrinis albus DSM 14484] Length = 241 Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats. Identities = 53/244 (21%), Positives = 91/244 (37%), Gaps = 20/244 (8%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS--------EVVGAIKNDIDQKI 56 + + + +++L + +NM+N T F+ + S V Sbjct: 8 MYVLASGMMLSQRKLEVITNNMANVSTPSFKRDVMLASVWQAPTPLSVPSVDPRLPQNNF 67 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVS 116 + G Y G TG D A++GD +FA+ S ++ TR G F++ DG LV+ Sbjct: 68 LYPVVGGIYTDLRQGGLRHTGNSTDLAIDGDGFFAVSSGNEVLYTRKGNFRLDKDGYLVN 127 Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 G + D S D + E G I G +G+Y ++ Q G Sbjct: 128 ELGMRILTDNGSPVR----VDGDLRITEDGSIFSGGLFYGRLGIYRLEGPQKIGSDLFRG 183 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + V +GFLED+N N + E+ ++I + T LI ++ + Sbjct: 184 RATP--------SERFKVLQGFLEDANVNPIEELVKLIEAHRAHEIYTNLIRSLDQLQEK 235 Query: 237 AIRN 240 Sbjct: 236 ITNQ 239 >gi|259907635|ref|YP_002647991.1| Flagellar basal-body rod protein FlgF [Erwinia pyrifoliae Ep1/96] gi|224963257|emb|CAX54741.1| Flagellar basal-body rod protein FlgF [Erwinia pyrifoliae Ep1/96] gi|283477477|emb|CAY73393.1| Flagellar basal-body rod protein flgF [Erwinia pyrifoliae DSM 12163] Length = 245 Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats. Identities = 52/245 (21%), Positives = 89/245 (36%), Gaps = 8/245 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + ++A A R + ++NM+N T GFR F V ++ + + V Sbjct: 1 MDRAIYTAMSAANAALNRQAVTSNNMANAATTGFRAQMAAFRAV--PVEGETIATRALVV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 Y +G TG LD AL + W A+ P TR+G +V DG +S +G Sbjct: 59 DSTPYHDGSMGPLNHTGRSLDVALPQNGWLAVAMPDGTEGYTRNGAIEVDRDG-ALSVNG 117 Query: 120 KYPVLDM---ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + D P + G V L + S + + G Sbjct: 118 YPLMGDGAPLTVPPQSAVTIAPDGTLTALGAGDDPTTVTPVGRLKMANASIQDLLHGDEG 177 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + L +G+ + LE SN + + M +MI + F+ I +++ + Sbjct: 178 LFHPKAGDSLPVDAGLRLSPETLEGSNVSPVKAMTEMIATARSFDMNMKTIRTADENAKQ 237 Query: 237 AIRNI 241 A + Sbjct: 238 A-NQL 241 >gi|167463160|ref|ZP_02328249.1| flagellar basal-body rod protein [Paenibacillus larvae subsp. larvae BRL-230010] gi|322383080|ref|ZP_08056907.1| flagellar basal-body rod-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321152742|gb|EFX45368.1| flagellar basal-body rod-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 297 Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats. Identities = 43/295 (14%), Positives = 91/295 (30%), Gaps = 53/295 (17%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51 M + +A +++ T +N++N +T G++ F E++ + D Sbjct: 1 MLRGLYTASSGMIAQQRKHDTATNNIANMNTPGYKQSTALSRSFPEMLISRFRDDETGTQ 60 Query: 52 -IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGD----------------------- 87 + + + V + G T DFA+ D Sbjct: 61 QVGRLHTGVLMEENVAIPVQGVIEETRNPFDFAIVSDLQVPGAAFNGAGIYVNEDGETIY 120 Query: 88 ----AWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVG 143 + I T +G+F V +G LV+A G + + I Sbjct: 121 KPQAYFMVENQAGEIRYTSNGKFHVDGNGFLVNAEGLRVLDNNRRPMQLINLLTNEPIKS 180 Query: 144 EKG------------EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP----LE 187 + + +GL V + N N ++ Sbjct: 181 VQVSNEGNILDENGYPYMNANEEPVRIGLAKVSDPHKLMHEGNGLYYLNQEDQALAEDVQ 240 Query: 188 DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 V +++GF+E SN + M M+ + + + ++ +KS+ + + + Sbjct: 241 PGDNVMIRQGFVEQSNVDPTQVMVDMMSALRAYEANQKMVQFYDKSLEKTVNEVG 295 >gi|310764859|gb|ADP09809.1| Flagellar basal-body rod protein FlgF [Erwinia sp. Ejp617] Length = 245 Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats. Identities = 52/245 (21%), Positives = 89/245 (36%), Gaps = 8/245 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + ++A A R + ++NM+N T GFR F V ++ + + V Sbjct: 1 MDRAIYTAMSAANAALNRQAVTSNNMANAATTGFRAQMAAFRAV--PVEGETIATRALVV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 Y +G TG LD AL + W A+ P TR+G +V DG +S +G Sbjct: 59 DSTPYHDGSMGPLNHTGRSLDVALPQNGWLAVAMPDGTEGYTRNGAIEVDRDG-ALSVNG 117 Query: 120 KYPVLDM---ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + D P + G V L + S + + G Sbjct: 118 YPLMGDGAPLTVPPQSAVTIAPDGTLTALGAGDDPTTVTPVGRLKMANASIQDLLHGDEG 177 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + L +G+ + LE SN + + M +MI + F+ I +++ + Sbjct: 178 LFHPKTGDSLPVDAGLRLSPETLEGSNVSPVKAMTEMIATARSFDMNMKTIRTADENAKQ 237 Query: 237 AIRNI 241 A + Sbjct: 238 A-NQL 241 >gi|21242726|ref|NP_642308.1| flagellar basal body rod protein FlgF [Xanthomonas axonopodis pv. citri str. 306] gi|21108202|gb|AAM36844.1| flagellar protein [Xanthomonas axonopodis pv. citri str. 306] Length = 251 Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats. Identities = 56/245 (22%), Positives = 96/245 (39%), Gaps = 10/245 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + A Q TV+ N++N DTVGF+ I+ Sbjct: 1 MDKALYVAMTGARASLQAQGTVSHNLANVDTVGFKAALANTEAF--KIQGKGYPSRIDAL 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + G TG LD +L+ D W A++SP TR+G +T +G LV+A+G Sbjct: 59 HVDQGFDRSQGHQKVTGNPLDVSLQQDRWLAVQSPDGSEAYTRNGELALTANGQLVTANG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG----LYSVDMSQGFVRRENS 175 + + + P + I +G+ TM + VD + R Sbjct: 119 HAVLDEGGNPMTIPPHQAMEIGSDGSISIIPQGEGPQTMAIVGKMKVVDAPADRLTRRPD 178 Query: 176 GISPNIPPTPLEDLSGVT---VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 G+ N P + + T + G LE SN ++ + +MI L ++F +I + Sbjct: 179 GLMRNTSTDPAQAFAVATGKTINSGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNGDD 238 Query: 233 SMLEA 237 + A Sbjct: 239 NAQSA 243 >gi|88811802|ref|ZP_01127056.1| hypothetical protein NB231_05335 [Nitrococcus mobilis Nb-231] gi|88791193|gb|EAR22306.1| hypothetical protein NB231_05335 [Nitrococcus mobilis Nb-231] Length = 246 Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats. Identities = 48/246 (19%), Positives = 87/246 (35%), Gaps = 9/246 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M I + + N++N +T GFR + + + Sbjct: 1 MDRYLYIAMTGAKHALKAQQVNNHNLANANTPGFRADLDAL--LSRPVAGPGYPSRVYSV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASG 119 S G I+TG LD AL G W A++ TR G ++T G L + +G Sbjct: 59 ETALGSSFAPGHLITTGRSLDVALNGAGWLAVQARDGTEAYTRRGDLRITAGGLLQTGAG 118 Query: 120 KYPVL---DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + + +A P + + + L V+ +R+ G Sbjct: 119 QLVLGNGGPVAIPPAKQVSIGQDGTITVIPIGQPDNAPAVVDRLRLVNPPSAALRKGEDG 178 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN---EKS 233 + T +GV+V G LE SN N++ + MI ++F + L++ +++ Sbjct: 179 LFRLEGGTAATADAGVSVVSGALESSNVNTVDALVNMIGNARRFEAYVKLMESAKSNDET 238 Query: 234 MLEAIR 239 +R Sbjct: 239 GQRLLR 244 >gi|167770195|ref|ZP_02442248.1| hypothetical protein ANACOL_01538 [Anaerotruncus colihominis DSM 17241] gi|167667517|gb|EDS11647.1| hypothetical protein ANACOL_01538 [Anaerotruncus colihominis DSM 17241] Length = 273 Score = 136 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 53/283 (18%), Positives = 100/283 (35%), Gaps = 51/283 (18%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK----------- 49 M +F G++ +A +Q + V++N++N +TVG++ + FS+++ Sbjct: 1 MNIAFYNGVSGLVAYQQEMDLVSNNVANVNTVGYKPSRASFSDLLYTQMWTNTDALVNAG 60 Query: 50 --------------------NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAW 89 + I + V L G+ + T LD A++GD + Sbjct: 61 GDAGAQDTADENGVGGMTDADGIHMQGHGVRLAYSDLVFRQGNLLQTEHPLDMAIKGDGF 120 Query: 90 FALESPRGII-LTRDGRFKVT---DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEK 145 FA+E G TR+G F ++ G LV++ G Y + I Sbjct: 121 FAVERANGTTEYTRNGAFDISIEGKSGYLVTSDGSYVLD---------ASGKRIKLDRGD 171 Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPL------EDLSGVTVKRGFL 199 + + +G+Y G I TP T+ G L Sbjct: 172 DDQFDLTNLQDEVGVYIFPNPYGLEPNTGGFRETPISGTPTVIKASSRASRPYTIVTGML 231 Query: 200 EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 E S + EM +I + F ++ ++ + + + N+ Sbjct: 232 EQSAVDLSEEMANIIVSQRAFQFSAKMVQTADE-IEDTVNNLR 273 >gi|15616300|ref|NP_244605.1| flagellar basal-body rod protein [Bacillus halodurans C-125] gi|10176362|dbj|BAB07457.1| flagellar basal-body rod protein [Bacillus halodurans C-125] Length = 274 Score = 136 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 47/274 (17%), Positives = 96/274 (35%), Gaps = 35/274 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDI----- 52 M A + +QR + +N++N +T G++ + F ++ A N Sbjct: 1 MLRGLWGAAAGMITQQQRQEMLTNNLANVNTPGYKADQAAIRAFPNMLIAAMNTGNVPKG 60 Query: 53 -----DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA--------------WFALE 93 + + V + + G + T D AL + Sbjct: 61 VAPVIGELTTGVYLQERMPNFRQGDLVETQNNTDVALLQGVMPTNEENGQPWALFYTVQN 120 Query: 94 SPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEIS---- 149 + TR+G F V DG L + G Y + + + + G + + Sbjct: 121 ENGEVRYTRNGNFTVDGDGFLTTGDGFYVLGTDGNPLQVNNEWFNVDGDGMITDEAGAAI 180 Query: 150 -QKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMY 208 Q V+A + V G +R E G P + +++GF+E SN ++ Sbjct: 181 GQINVVVAEDPMQLVKEGNGLLRFEGDGELPTGVGNAAVN---YQLQQGFIERSNVDAAQ 237 Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 M +M+ + F + ++ ++S+ +A+ + Sbjct: 238 TMTEMMQAYRTFEANQQVLRAYDESLGKAVNEVG 271 >gi|160939651|ref|ZP_02086999.1| hypothetical protein CLOBOL_04543 [Clostridium bolteae ATCC BAA-613] gi|158437442|gb|EDP15206.1| hypothetical protein CLOBOL_04543 [Clostridium bolteae ATCC BAA-613] Length = 244 Score = 136 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 52/245 (21%), Positives = 102/245 (41%), Gaps = 15/245 (6%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN--DIDQKISFVASGKEYLSKE 69 A ++ L ++NM+N T G+++++ F++++ + Q V + + + Sbjct: 1 MNAFQKDLDVTSNNMANISTNGYKSMRSSFNDLLYTQMDMRPQAQVGHGVRNDGPGTTFQ 60 Query: 70 VGSFISTGTELDFALEGDAWFALESPRGI---ILTRDGRFKVT--DDGSLVSASGKYPVL 124 G F T ELDFA+ G+A+FA+++ TRDG F+++ DDG+ ++ S VL Sbjct: 61 QGIFRKTDRELDFAISGNAFFAIQTSEDEEEPAYTRDGAFQISSTDDGNYLTTSDGSYVL 120 Query: 125 DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT 184 D PI++ K ++ +GL+ + +G + Sbjct: 121 DQDGEPIELEYKTSEDGGDNDAGELDLDGLVERIGLFVCENPEGLQHVGMNLFRTGETSG 180 Query: 185 P-------LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 ++ LE SN N EM ++ + F + ++ ++ M E Sbjct: 181 EWLSMDDLDDEQEKSKAMSHALEMSNCNMSTEMVNLMQTQRAFQLNSRIVTTADQ-MEEM 239 Query: 238 IRNIA 242 I N+ Sbjct: 240 INNLR 244 >gi|171321214|ref|ZP_02910184.1| protein of unknown function DUF1078 domain protein [Burkholderia ambifaria MEX-5] gi|171093524|gb|EDT38694.1| protein of unknown function DUF1078 domain protein [Burkholderia ambifaria MEX-5] Length = 234 Score = 136 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 48/242 (19%), Positives = 91/242 (37%), Gaps = 10/242 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + L QR T A N+SN T G+R F +++ Sbjct: 1 MDDLMTLSLRLISLETQRAETAARNLSNVATPGYRREIA-FQDMLANDVTPAG----GGP 55 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 G + TG D A++GD +F +++ G TR G F DG LV+ +G Sbjct: 56 PIHRLTDFSPGRLVRTGDPFDLAIDGDGFFQVQTDSGPAYTRTGAFLRAADGRLVTRAGG 115 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 +P+ I + + V G + G + + + + D R + +P Sbjct: 116 WPLQGAHGD---IVVSLDGWRVDADGTVLDHGVPTSVIRVATFDAPSRLQRIADGLYAPR 172 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 + + +GF+E SN ++ +M ++I ++ + L+ + M ++ Sbjct: 173 DTV--GMRDAPTRLAQGFVETSNVSAADDMVRLIEAMRRVETGQKLVHAYDDLMGSVLQR 230 Query: 241 IA 242 + Sbjct: 231 LG 232 >gi|295678057|ref|YP_003606581.1| flagellar basal-body rod protein FlgF [Burkholderia sp. CCGE1002] gi|295437900|gb|ADG17070.1| flagellar basal-body rod protein FlgF [Burkholderia sp. CCGE1002] Length = 252 Score = 136 bits (341), Expect = 4e-30, Method: Composition-based stats. Identities = 51/249 (20%), Positives = 98/249 (39%), Gaps = 8/249 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI----DQKI 56 M ++ ++ + VA+N++N T GFR + V + + + Sbjct: 1 MDRLIYTAMSGSAQALEQQAIVANNLANASTTGFRAQLETYRAVPMSFGDGSTINDNTTR 60 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLV 115 +FV S G TG LD A++G W ++++ TR G + ++G LV Sbjct: 61 TFVLSSTPGADFTPGPIQQTGNPLDVAIQGAGWLSVQTADGNEAYTRAGNLHIDENGQLV 120 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRR 172 +A+ + + + V + + I G ++ A + + V+ + R Sbjct: 121 NATNQVVLGNGGPVSVPPGAQITIGKDGTVTALTPGDPPTAVVTIDQLKLVNPDPQSITR 180 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 + G+ P + VT+ LE SN N + M MI ++F T L+ +K Sbjct: 181 GDDGLFRTADGNPADADPTVTLAPASLEGSNVNPVSAMVSMITNARQFQMQTQLLQNADK 240 Query: 233 SMLEAIRNI 241 + A + + Sbjct: 241 NDQSANQIL 249 >gi|294501851|ref|YP_003565551.1| flagellar hook-basal body complex protein FlhO [Bacillus megaterium QM B1551] gi|294351788|gb|ADE72117.1| flagellar hook-basal body complex protein FlhO [Bacillus megaterium QM B1551] Length = 274 Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats. Identities = 48/274 (17%), Positives = 97/274 (35%), Gaps = 35/274 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIK---VKFSEVVGAIKN------- 50 M F A L+ +++ + +N++N +T GF+ + F +++ Sbjct: 1 MFKGFYTAAAGMLSQQRQTDLLTNNIANANTPGFKADQGTLKAFPDMLLQRMESEDLPTD 60 Query: 51 ---------DIDQKISFVASGKEYLSKEVGSFISTGTELDFALE---------GDAWFAL 92 DI + V + + G T D AL G + Sbjct: 61 RSISVQNKKDIGAINTGVYMQETVPNFTQGDLQQTSQSTDIALMEQNMPTKEGGLFFVVQ 120 Query: 93 ESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG 152 TR+ F + +G L +++G Y + I K E F V +G +++ Sbjct: 121 SPDNTPQYTRNSNFTLDQEGFLTTSTGAYVLNTNNQP---IQLKSENFTVDSQGNVTENN 177 Query: 153 KVIATMGLYSVDMSQGFVRRENSGISP----NIPPTPLEDLSGVTVKRGFLEDSNANSMY 208 + +A + + Q + N +P +K+GF+E SN ++ Sbjct: 178 QQVAQIDIAYASDLQTIKKAGNGLYETLNNQPLPSARNNPGISYQLKQGFVERSNVDAAQ 237 Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 M ++ + F + ++ ++SM +A I Sbjct: 238 NMTDLLTAYRAFEANQKIMQAYDRSMDKAANEIG 271 >gi|253682640|ref|ZP_04863437.1| flagellar basal-body rod protein FlgG [Clostridium botulinum D str. 1873] gi|253562352|gb|EES91804.1| flagellar basal-body rod protein FlgG [Clostridium botulinum D str. 1873] Length = 333 Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats. Identities = 49/330 (14%), Positives = 95/330 (28%), Gaps = 91/330 (27%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50 M S G++ + +L +N++N T F+ +V+F +++ Sbjct: 1 MLRSMYAGISGMKVNQTKLDVTGNNIANVSTTAFKGSRVRFQDMLSQNVQEAVGPGKNLG 60 Query: 51 --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF------------------ 90 + Q V+ G T LD A++G + Sbjct: 61 GVNGRQVGLGVSVAGIDTVVSQGMLQPTSRNLDVAIDGTGYLVVAKGKLGESSADTGIEL 120 Query: 91 -----ALESPRGIILTRDGRFKVTDDGSLVSASGKYPVL--------------------- 124 S I TRDG F + +G+L+++ G + Sbjct: 121 NDGNINENSNFQINYTRDGAFALDYEGNLLTSEGYRVMGYAIEGADIDYKKDGIVKFKNV 180 Query: 125 -DMASVPIQIPQKDEIFNVGEKGEISQKGK-----------------------VIATMGL 160 + +I + + GE GK + + + Sbjct: 181 DGDDELKAKIDRLVPLKIPELVGEDKDNGKKMRSFSIEKNGLIKGVLDDGTITALGQIAM 240 Query: 161 YSVDMSQGFVRRENSGISPN-----------IPPTPLEDLSGVTVKRGFLEDSNANSMYE 209 S +G + + S I S + +G LE SN + + Sbjct: 241 TSFKNPEGLKKEGKNMYSNTPNSGKPVFRSGIGADKDNSESYGDMIQGMLEMSNVDLAEQ 300 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 MI T+ F + +I ++ + + I Sbjct: 301 FTDMIVTTRAFQASGKMISTGDEILQDIIN 330 >gi|188991640|ref|YP_001903650.1| flagellar basal body rod protein FlgF [Xanthomonas campestris pv. campestris str. B100] gi|167733400|emb|CAP51601.1| Flagellar basal-body rod protein flgF [Xanthomonas campestris pv. campestris] Length = 251 Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats. Identities = 58/245 (23%), Positives = 97/245 (39%), Gaps = 10/245 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + A Q STV+ N++N DTVGF+ I+ Sbjct: 1 MDKALYVAMTGARASLQAQSTVSHNLANVDTVGFKAALANTEAF--QIRGKGYPSRIDAL 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + G TG LD +L+ D W A++SP TR+G +T +G LV+A+G Sbjct: 59 HVDQGFDRSQGHQKVTGNPLDVSLQQDRWLAVQSPDGSEAYTRNGELALTANGQLVTANG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG----LYSVDMSQGFVRRENS 175 + + + P + I +G+ TM + VD + R Sbjct: 119 HAVLDEGGNPMTIPPHQAMEIGSDGSISIIPQGEGPPTMAIVGKMKVVDAPADRLTRRPD 178 Query: 176 GISPNIPPTPLEDLSGVT---VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 G+ N P + + T V G LE SN ++ + +MI L ++F +I + Sbjct: 179 GLMRNTSTDPAQAFAVATGKTVNSGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNGDD 238 Query: 233 SMLEA 237 + A Sbjct: 239 NAQSA 243 >gi|229917023|ref|YP_002885669.1| flagellar basal body rod protein [Exiguobacterium sp. AT1b] gi|229468452|gb|ACQ70224.1| flagellar basal body rod protein [Exiguobacterium sp. AT1b] Length = 257 Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats. Identities = 60/258 (23%), Positives = 104/258 (40%), Gaps = 27/258 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIK---VKFSEVV-----------G 46 M A AL+++ +++N+ N T GF+ F E++ Sbjct: 1 MLRGLYTAAGAMNALQRQQEILSNNLGNVRTPGFKASDGVVRSFPEMLLAQVSNPDNAKS 60 Query: 47 AIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALE------GDAWFALESPRGIIL 100 +K ++ V + GS +G+ D L+ G FA+E + Sbjct: 61 RVKGEVGTLSMGVYLQETMPRFSAGSITESGSPTDLYLKAPTDFTGAPMFAVEQGGETLY 120 Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 T +GRF + + L SA G Y + D +I F VG+ G I+ G+ +AT+G Sbjct: 121 TTNGRFSIDEALFLRSADGGYILSDE---GERIQLPSSEFQVGKDGVITSLGQNVATLGA 177 Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 Y +D + N P P + V V +GF+E++N N M ++ ++F Sbjct: 178 YQIDDLTTLEQVGNDWRVTGDAPAP----AQVEVLQGFIEEANVNLDQTMADLMMTYRQF 233 Query: 221 NSITTLIDENEKSMLEAI 238 + ++ +KS AI Sbjct: 234 EANQKVVQAYDKSAERAI 251 >gi|223040701|ref|ZP_03610970.1| flagellar basal-body rod protein [Campylobacter rectus RM3267] gi|222878065|gb|EEF13177.1| flagellar basal-body rod protein [Campylobacter rectus RM3267] Length = 270 Score = 135 bits (340), Expect = 5e-30, Method: Composition-based stats. Identities = 46/267 (17%), Positives = 101/267 (37%), Gaps = 24/267 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDID---- 53 M + A + RL +A+N++N +T+GF+ V F + ++++ Sbjct: 1 MNNGYYQATGAMVTQFNRLDVIANNLANINTIGFKRDDVVVGDFERIFKEYRDELPIKNH 60 Query: 54 ----------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDA--WFALESPRGIILT 101 ++Y+ G + +LDFA++ + + P + LT Sbjct: 61 TKDAAKFLNRTIDRVPQISEQYVDFSQGGLKFSNNDLDFAMKREDLFFLVEVKPGDVRLT 120 Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMA---SVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158 ++G F + +DG LV+ G + + + E F+ + G + + +A + Sbjct: 121 KNGSFNLDEDGFLVTKEGYKVLPSDYFSNNFQGIQIPEGERFSADKNGNLYSNEEPLARL 180 Query: 159 GLYSVDMSQGFVRRENSGIS-PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217 + + + ++ PN+ V + + SN N++ EM +I Sbjct: 181 YIAQPKEIRNLTKEGDNLYVLPNLKELEDVGGEIDAVAWKYTQISNVNAVTEMVGLIETQ 240 Query: 218 QKFNSITTLIDEN-EKSMLEAIRNIAS 243 + ++ + + EAI +AS Sbjct: 241 RFVEMYQKVMTSHMDDLNQEAISKLAS 267 >gi|190574262|ref|YP_001972107.1| flagellar basal body rod protein FlgF [Stenotrophomonas maltophilia K279a] gi|190012184|emb|CAQ45807.1| putative flagellar basal-body rod protein [Stenotrophomonas maltophilia K279a] Length = 249 Score = 135 bits (340), Expect = 5e-30, Method: Composition-based stats. Identities = 53/253 (20%), Positives = 90/253 (35%), Gaps = 14/253 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + A Q T++ N++N+DT GF+ IK Sbjct: 1 MDKALYVAMTGARASLQAQGTLSHNLANSDTPGFKEALANTEAF--PIKGPGFASRVDAL 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119 ++ GS TG LD +L+ W A S TR VT +G LV++SG Sbjct: 59 HVDAGFNRTPGSQHITGKPLDLSLQTGTWLAVQSSDGSEAYTRGAALSVTPNGQLVTSSG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172 + + D + + +G G IS + + + + R Sbjct: 119 RPVLDDNNNPIAI--PPYQAMEIGADGTISIIPQGEGPQTMAQIGRIKVVQAPDERLERG 176 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 + P P G V G LE SN ++ + QMI L +++ +I ++ Sbjct: 177 LDGLFRNTDPRQPFAPAQGTAVHSGQLEGSNVDAAGALVQMIQLQRQYEMQVQVIKHGDE 236 Query: 233 SMLEAIR--NIAS 243 + A + S Sbjct: 237 NARSANSMLRLGS 249 >gi|149184207|ref|ZP_01862525.1| hypothetical protein ED21_25853 [Erythrobacter sp. SD-21] gi|148831527|gb|EDL49960.1| hypothetical protein ED21_25853 [Erythrobacter sp. SD-21] Length = 261 Score = 135 bits (340), Expect = 5e-30, Method: Composition-based stats. Identities = 47/258 (18%), Positives = 88/258 (34%), Gaps = 30/258 (11%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS--GKEYLSKE 69 + L ++ N++N++T GF+ + +FSE+V + I + + + Sbjct: 1 MKNAQTSLGVISHNIANSETYGFKRSRTEFSEIVAGSALTNPRMIQGIGASVKSITQNFA 60 Query: 70 VGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRFKVTDDGSLVSASGKYPVLDMA 127 +G TG+ LD A+ GD +F S + TR G F ++ G++V +SG L Sbjct: 61 LGPIEQTGSALDLAITGDGFFTTRSAADGSTLYTRSGSFSLSGTGNIVDSSGNRLQLFPV 120 Query: 128 SVPIQIPQKDEIFNVGEKGEISQKGKV---------------------IATMGLYSVDMS 166 Q+ ++ V + + L + Sbjct: 121 DANGQVTGNTLGDANLPPQNLAGSEFVGVTINEVGVVSASYADGSVEPVGAIALATFIAP 180 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFN 221 G + ++ S T + G LE SN + E+ +I + F Sbjct: 181 TGLKKVGDANWEGTGLSGAATYGSPGTGAYGSLLSGALERSNVDIAEELVGLITAQRNFQ 240 Query: 222 SITTLIDENEKSMLEAIR 239 + ID + I Sbjct: 241 ANAKAIDTATQISQTVIN 258 >gi|325918878|ref|ZP_08180955.1| flagellar basal-body rod protein FlgF, proteobacterial [Xanthomonas vesicatoria ATCC 35937] gi|325534915|gb|EGD06834.1| flagellar basal-body rod protein FlgF, proteobacterial [Xanthomonas vesicatoria ATCC 35937] Length = 251 Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats. Identities = 57/247 (23%), Positives = 94/247 (38%), Gaps = 14/247 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + A Q STV+ N++N DTVGF+ I+ Sbjct: 1 MDKALYVAMTGARASLQAQSTVSHNLANVDTVGFKAALANTEAF--KIQGKGYPSRIDAL 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + G TG LD +L+ D W A++SP TR+G +T +G LV+A+G Sbjct: 59 HVDQGFDRSQGHQKVTGNPLDVSLQQDRWLAVQSPDGSEAYTRNGELALTANGQLVTANG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLY------SVDMSQGFVRRE 173 + + +G G IS + + VD + R Sbjct: 119 HAVL--DEGGNPMTIPPHQAMEIGSDGSISIIPQGEGPQAMDIVGKMKVVDAPADRLTRR 176 Query: 174 NSGISPNIPPTPLEDLSGVT---VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 G+ N P + + T V G LE SN ++ + +MI L ++F +I Sbjct: 177 PDGLMRNTSTDPAQAFAVATGKTVNGGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNG 236 Query: 231 EKSMLEA 237 + + A Sbjct: 237 DDNAQSA 243 >gi|291562027|emb|CBL40843.1| fagellar hook-basal body proteins [butyrate-producing bacterium SS3/4] Length = 305 Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats. Identities = 43/302 (14%), Positives = 95/302 (31%), Gaps = 63/302 (20%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + ++ A + +L + +N++N +T GF++ F E + + Sbjct: 1 MLRAMDSAVSGLRAHQNKLDVIGNNIANVNTFGFKSQSYSFKEAMYQTSTTSTKGSENAG 60 Query: 61 SGKEYLSKEVGSFISTGTEL-----------DFALEGDAWFALESPRGII---------- 99 S T++ + +++G+ +F Sbjct: 61 GVNAAQYGYGSMMGSISTDMSASTPTYVGGLNASVDGEGFFITFPKSTETVTVADMKKTD 120 Query: 100 --LTRDGRFKVTDDGSLVSASGKYPVL-----------------------DMASVPIQIP 134 TR G+F + +G L A+G + D+ P Sbjct: 121 FDYTRVGQFNIDGNGYLTDANGNFVYGFRPDAVDKPTKFDGDLVAIKVPSDVTGADFDDP 180 Query: 135 QKDEIFNVGEKGEISQ-----------KGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183 + + GEIS K I + + + +G ++ + Sbjct: 181 LQLTNVKINSLGEISGTVKSTDPDKDGKTVSIGKVAIATFQNPEGLSKKGSFYYGAAESD 240 Query: 184 T------PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + S ++ G+LE SN + E MI + F + + +I +++ + + Sbjct: 241 NSGNASATIPGGSTSSLMTGYLEASNVDLAKEFSDMITTQRGFQANSKIITVSDEILSDL 300 Query: 238 IR 239 I Sbjct: 301 IN 302 >gi|304407726|ref|ZP_07389377.1| fagellar hook-basal body protein [Paenibacillus curdlanolyticus YK9] gi|304343209|gb|EFM09052.1| fagellar hook-basal body protein [Paenibacillus curdlanolyticus YK9] Length = 270 Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats. Identities = 50/271 (18%), Positives = 103/271 (38%), Gaps = 29/271 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S + + L+Q+L +ADN++N +TVG++ F +++ K Sbjct: 1 MNGSMINAMVSMNGLQQKLDILADNIANLNTVGYKRKDASFEDLLTNAKQQPSAFKEPGR 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107 + V G TG LD A+EG+A + + +P G TR+G F+ Sbjct: 61 MSPMNYTQGWGVRLATIEPDLSQGPLQQTGNTLDIAIEGNALYEVRTPDGTAYTRNGSFQ 120 Query: 108 VTD--DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ-----KGKVIATMGL 160 ++ +GS V A+ +L + + + V G + + + L Sbjct: 121 LSPLANGSSVLATSDGNLLMGENDQPIVVPANHTIRVDADGTVQAVAGDGSASPVGKLKL 180 Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLE--------DLSGVTVKRGFLEDSNANSMYEMGQ 212 ++ + + S V++++G++E SN + EM Sbjct: 181 LQATRPSLLTTVADNLYAVAEGVNVEDVLRTVSAGADSKVSLRQGYVEQSNVDMTSEMTD 240 Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 +I++ + + + ++ M A N+ + Sbjct: 241 LINVQRAYQLSARALTSSDSMMGFA-NNLRA 270 >gi|294664592|ref|ZP_06729933.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292605649|gb|EFF48959.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 249 Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats. Identities = 57/245 (23%), Positives = 97/245 (39%), Gaps = 10/245 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + A Q STV+ N++N DTVGF+ I+ Sbjct: 1 MDKALYVAMTGARASLQAQSTVSHNLANVDTVGFKAALANTEAF--KIQGKGYPSRIDAL 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + G TG LD +L+ D W A++SP TR+G +T +G LV+A+G Sbjct: 59 HVDQGFDRSQGHQKVTGNPLDVSLQQDRWLAVQSPDGSEAYTRNGELALTANGQLVTANG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG----LYSVDMSQGFVRRENS 175 + + + P + I +G+ TM + VD + R Sbjct: 119 HAVLDEGGNPMTIPPHQAMEIGSDGSISIIPQGEGPQTMAIVGKMKVVDAPADRLTRRPD 178 Query: 176 GISPNIPPTPLEDLSGVT---VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 G+ N P + + T + G LE SN ++ + +MI L ++F +I + Sbjct: 179 GLMRNTSTDPAQAFAVATGKTINSGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNGDD 238 Query: 233 SMLEA 237 + A Sbjct: 239 NGQSA 243 >gi|261420740|ref|YP_003254422.1| fagellar hook-basal body protein [Geobacillus sp. Y412MC61] gi|319768410|ref|YP_004133911.1| flagellar hook-basal body protein [Geobacillus sp. Y412MC52] gi|261377197|gb|ACX79940.1| fagellar hook-basal body protein [Geobacillus sp. Y412MC61] gi|317113276|gb|ADU95768.1| flagellar hook-basal body protein [Geobacillus sp. Y412MC52] Length = 273 Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats. Identities = 60/273 (21%), Positives = 108/273 (39%), Gaps = 31/273 (11%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S AL++RL T++ N++N++TVGF+ + F+E++ + + Sbjct: 1 MLRSMLTAANTMNALQERLDTISHNIANSNTVGFKRREASFAELLTQQIDRLPNDEAPRE 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALE-GDAWFALESPRG-----IILTR 102 + + L + G+ + TG LDFAL + WF + I TR Sbjct: 61 TPAGVRYGNGARLASTMLITKQGALVETGRRLDFALTAENQWFRVRLADQSGAETIGYTR 120 Query: 103 DGRFKVTDDGSL--VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG-----KVI 155 G F + ++ S VLD + PI +P V G ++ Sbjct: 121 AGNFSLAPMNGELALTTSDGLFVLDERNAPIVLPADAHDVQVSPTGTLTATNADGRVVAR 180 Query: 156 ATMGLYSVDMSQGFVRRENSGIS-PNIPPTPLEDL----SGVTVKRGFLEDSNANSMYEM 210 +G+ + Q R + + PN+P E ++VK+G LE SN + EM Sbjct: 181 VNLGVTVIRRPQLLEARGGNVYALPNVPGAAEELNGNLRGQISVKQGALEQSNVDLGEEM 240 Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 ++ ++ + I +E+ + I + S Sbjct: 241 VGLMATSRAYQLNARAISISEQMLG-LINGMRS 272 >gi|168705106|ref|ZP_02737383.1| flagellar basal-body rod protein FlgG [Gemmata obscuriglobus UQM 2246] Length = 261 Score = 135 bits (339), Expect = 6e-30, Method: Composition-based stats. Identities = 44/251 (17%), Positives = 84/251 (33%), Gaps = 18/251 (7%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID--------- 53 ++ + A L ++N++N+DT G++T ++ F + + + + Sbjct: 4 SAITSSASGIRAASTYLDVTSNNIANSDTPGYKTGQITFQDQLYRAADPVGAPTTGVTPP 63 Query: 54 ---QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVT 109 Q S V G+ + + D A++G+ +F + P TR G F Sbjct: 64 SGTQIGSGVVVDAITGKFTQGAALESTGRFDLAIQGEGFFQVILPDGSTGYTRAGNFVTD 123 Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169 + G LV+ G V D+ + +VI + L G Sbjct: 124 NTGQLVTPQGYRLVSDLIVPANTSSITVAPDGTVTAALDNGTAQVIGQVTLTRFVNPGGL 183 Query: 170 VRRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224 R ++ + +V+ G LE SN E+ +I Q F T Sbjct: 184 SRSGDNVYTATPAAGDAINGAPNTNGIGSVESGRLEQSNVELANELVNLIVAQQAFRFNT 243 Query: 225 TLIDENEKSML 235 + + + Sbjct: 244 QALQLESQVLQ 254 >gi|262273528|ref|ZP_06051342.1| flagellar basal-body rod protein FlgF [Grimontia hollisae CIP 101886] gi|262222506|gb|EEY73817.1| flagellar basal-body rod protein FlgF [Grimontia hollisae CIP 101886] Length = 243 Score = 135 bits (339), Expect = 6e-30, Method: Composition-based stats. Identities = 45/242 (18%), Positives = 88/242 (36%), Gaps = 4/242 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M ++ + +A+N++N +T GFR V I+ + + Sbjct: 1 MDKLLFTAVSGATRVITAQQVLANNLANVNTDGFRADIGLAKSV--EIQGKGLETRTLTG 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119 G + G+ T LD A+ G+ +FA++ TR G F + ++G L+ Sbjct: 59 IGSTWSDFTPGALKRTDNPLDVAIRGNGFFAVQVGEDGEAYTRAGAFHLNENGDLMLGDR 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 + + + + V L V +R+ G+ Sbjct: 119 PVLGDGGPIAIPEHEKLMIGQDGTISVVTAGSAAVQEVGKLKLVKPEPNQLRKGEDGLFR 178 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 P++ GVTV G+LE SN N++ + + I L++ F ++ E+ + Sbjct: 179 TYNGEPVDADQGVTVAVGYLESSNVNAIDALVKNIDLSRNFEFQIKMMKTAEE-LASTGN 237 Query: 240 NI 241 + Sbjct: 238 RL 239 >gi|327398889|ref|YP_004339758.1| flagellar hook-basal body protein [Hippea maritima DSM 10411] gi|327181518|gb|AEA33699.1| flagellar hook-basal body protein [Hippea maritima DSM 10411] Length = 264 Score = 135 bits (339), Expect = 6e-30, Method: Composition-based stats. Identities = 60/261 (22%), Positives = 105/261 (40%), Gaps = 21/261 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS-----------------E 43 M + + QR++ + +N++N +T GF+ + + Sbjct: 1 MFSGVYDAAGGMVIEMQRVNNITNNIANLNTPGFKKEGINVKSWSRIWGMANANLPIPPD 60 Query: 44 VVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103 A + K S Y+ G TG +LDFALEG +F + +P+GI TR+ Sbjct: 61 TQAAANFINETKNSTPHLDTNYIDFSQGPLRHTGNKLDFALEGKGFFLVLAPKGIQYTRN 120 Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQ--IPQKDEIFNVGEKGEISQKGKVIATMGLY 161 G+F++ DG L+ YPV+ + I + + GE+ G I + + Sbjct: 121 GQFEINKDGILIQRGTGYPVVGENYLINHKLIKITGKTILIKNDGEVYSDGVRIDKLAIR 180 Query: 162 SVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221 + NS SP +P+ +K G+LE SN + EM ++I + F Sbjct: 181 DFANYTNLKKEPNSMFSPINGESPIP-APNTFLKEGYLEMSNVTIVNEMVKLIESQRNFE 239 Query: 222 SITTLIDE-NEKSMLEAIRNI 241 +ID + + + RN+ Sbjct: 240 RYQRVIDSLGNELLSDIARNL 260 >gi|194365679|ref|YP_002028289.1| flagellar basal body rod protein FlgF [Stenotrophomonas maltophilia R551-3] gi|194348483|gb|ACF51606.1| flagellar basal-body rod protein FlgF [Stenotrophomonas maltophilia R551-3] Length = 249 Score = 135 bits (339), Expect = 6e-30, Method: Composition-based stats. Identities = 52/253 (20%), Positives = 90/253 (35%), Gaps = 14/253 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + A Q T++ N++N+DT GF+ I+ Sbjct: 1 MDKALYVAMTGARASLQAQGTLSHNLANSDTPGFKEALANTEAF--PIRGPGFASRVDAL 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119 ++ GS TG LD +L+ W A S TR VT +G LV++SG Sbjct: 59 HVDAGFNRTPGSQHITGKPLDLSLQTGTWLAVQSSDGSEAYTRGAALSVTPNGQLVTSSG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172 + + D + + +G G IS + + + + R Sbjct: 119 RPVLDDNNNPIAI--PPYQAMEIGADGTISIIPQGEGPQTMAQIGRIKVVQAPDERLERG 176 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 + P P G V G LE SN ++ + QMI L +++ +I ++ Sbjct: 177 LDGLFRNTDPLQPFAPAQGTAVHSGQLEGSNVDAAGALVQMIQLQRQYEMQVQVIKHGDE 236 Query: 233 SMLEAIR--NIAS 243 + A + S Sbjct: 237 NARSANSMLRLGS 249 >gi|295707199|ref|YP_003600274.1| flagellar hook-basal body complex protein FlhO [Bacillus megaterium DSM 319] gi|294804858|gb|ADF41924.1| flagellar hook-basal body complex protein FlhO [Bacillus megaterium DSM 319] Length = 274 Score = 135 bits (339), Expect = 6e-30, Method: Composition-based stats. Identities = 50/274 (18%), Positives = 102/274 (37%), Gaps = 35/274 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIK---VKFSEVVGAIKN------- 50 M F A L+ +++ + +N++N +T GF+ + F +++ Sbjct: 1 MFKGFYTAAAGMLSQQRQTDLLTNNIANANTPGFKADQGTLKAFPDMLLQRMESEDLPTD 60 Query: 51 ---------DIDQKISFVASGKEYLSKEVGSFISTGTELDFALE--------GDAWFALE 93 +I + V + S G T + AL G +F ++ Sbjct: 61 RSISVQNKKEIGAINTGVYMQETVPSFTQGDLQQTSQSTNIALMEQNMPTKEGGLFFVVQ 120 Query: 94 SPRGII-LTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG 152 SP TR+ F + +G L +++G Y + I K E F V +G +++ Sbjct: 121 SPDNTPQYTRNSNFTLDQEGFLTTSTGAYVLNTNNQP---IQLKSENFTVDSQGNVTENN 177 Query: 153 KVIATMGLYSVDMSQGFVRRENSGISP----NIPPTPLEDLSGVTVKRGFLEDSNANSMY 208 + +A + + Q + N +P +K+GF+E SN ++ Sbjct: 178 QQVAQIDIAYASDLQTIKKVGNGLYETLNNQPLPSARNNPGISYQLKQGFVERSNVDAAQ 237 Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 M ++ + F + ++ ++SM +A I Sbjct: 238 SMTDLLTAYRAFEANQKIMQAYDRSMDKAANEIG 271 >gi|239995124|ref|ZP_04715648.1| flagellar basal-body rod protein FlgF [Alteromonas macleodii ATCC 27126] Length = 247 Score = 134 bits (338), Expect = 8e-30, Method: Composition-based stats. Identities = 53/246 (21%), Positives = 91/246 (36%), Gaps = 8/246 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M I + A+N++N T GFR + + + F Sbjct: 1 MDKLLYISASGASQDLLGTGIRANNLANAQTTGFRAQLEQARSM--PAYGEGLPTRVFSM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119 + + E G I T +LD A++GD WFA + +RDG FK+ DDG L Sbjct: 59 TESPSNNYESGPMIKTDRDLDVAIQGDGWFAVQDQNGQEAYSRDGNFKLGDDGILTDIHD 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 + + D + + +P + + Q G + V + + R N Sbjct: 119 RVVLGDNGPIFLPVPLDNLNIAADGTLSMRQLGAPANVIEEVGRLKLVSPNYADMERGND 178 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 G+ + + V V G LE SN N++ EM MI L + + ++ + E+ + Sbjct: 179 GLFRMEDGSIAPANANVKVMSGMLEGSNVNAVDEMVDMISLQRHYELQVKMMKQAEE-LD 237 Query: 236 EAIRNI 241 + Sbjct: 238 TRGNQL 243 >gi|119899026|ref|YP_934239.1| flagellar basal-body rod protein FlgF [Azoarcus sp. BH72] gi|119671439|emb|CAL95352.1| flagellar basal-body rod protein FlgF [Azoarcus sp. BH72] Length = 245 Score = 134 bits (338), Expect = 8e-30, Method: Composition-based stats. Identities = 51/244 (20%), Positives = 92/244 (37%), Gaps = 5/244 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + V+ N++N + GFRT K V ++ + +F Sbjct: 1 MDRLIYTAMTGAKGTLDQQAAVSHNLANATSTGFRTEMHKLRAV--EVQTEAMHTRAFTV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 G TG D A+EG W ++ P TRDG +++ +G L + SG Sbjct: 59 DASVATDYSAGPLQFTGRPYDVAVEGKGWLTVQMPDGTEAYTRDGSLELSANGVLQTRSG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT--MGLYSVDMSQGFVRRENSGI 177 + + P + + Q G+ + L V+ + + R + G+ Sbjct: 119 LPVLGASGAPIALPPDTEIVIGADGTISSLQAGQNVVNVVDQLKLVNPPEATLVRGDDGL 178 Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 V V G+LE SN N + +M MI L ++F T ++ E++ A Sbjct: 179 FRTGDGAAQAADPAVKVAGGYLEGSNVNVVDQMVTMISLARQFEMQTRMLQTAEQNDRAA 238 Query: 238 IRNI 241 + + Sbjct: 239 AQVL 242 >gi|251772413|gb|EES52980.1| flagellar basal body rod protein [Leptospirillum ferrodiazotrophum] Length = 265 Score = 134 bits (338), Expect = 8e-30, Method: Composition-based stats. Identities = 48/265 (18%), Positives = 97/265 (36%), Gaps = 28/265 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK----------- 49 M+ + ++ EQ + ++ N++N +T GFR +V F + + Sbjct: 1 MRRAEFALVSGAQGQEQMMDVLSSNLANVNTPGFRKDRVMFRSYLPHREYLHRTPPDRPG 60 Query: 50 -------------NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR 96 I + Y+ E G F STG LD AL G + + +P Sbjct: 61 FNLTPFGTFPTPWGMAGSDIPHSGVDRIYVRYEEGEFQSTGNPLDVALSGKGFLTVRTPG 120 Query: 97 GIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156 G +LTR+G V G ++ +P++ + I +P + + G++ KV+ Sbjct: 121 GTLLTRNGHLTVDSQG-RLTTHEGHPLVGVDGKEIHLPSGVDPIRIDSAGKVFSGEKVVG 179 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + + + + + G+ + V+ G +E SN EM +MI Sbjct: 180 QLAISAPAGPMEHLTKVGDGLFFSPDGLVK---GEAVVRNGGVEGSNVKGTSEMVRMIQG 236 Query: 217 TQKFNSITTLIDENEKSMLEAIRNI 241 + + + + + ++ Sbjct: 237 MRTYQTDLQALHTLNDLTNRTVNDM 261 >gi|167463161|ref|ZP_02328250.1| flagellar hook-basal body protein [Paenibacillus larvae subsp. larvae BRL-230010] Length = 275 Score = 134 bits (338), Expect = 8e-30, Method: Composition-based stats. Identities = 45/275 (16%), Positives = 104/275 (37%), Gaps = 34/275 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S + L+Q+L +A+N++N +TVG++ F E++ ++KN + Sbjct: 1 MNHSMINASVSMNGLQQKLDILANNIANINTVGYKRKDASFQEILKSVKNQPEKFQLPGR 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107 Q + G +T LD ++GD F + T+ G F+ Sbjct: 61 MTPSGLQLGWGARLSQISSDFTQGPVENTQNSLDLMVQGDGMFEILVDGKPYWTKSGSFQ 120 Query: 108 VT----DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ-----KGKVIATM 158 ++ + G ++ + V + PI +P + + ++ + + + Sbjct: 121 LSVMPGNQGLALTTKDGHYVSGLNGEPIILPPNTQPKIDEQGNVVAYSETGARPVQVGRI 180 Query: 159 GLYSVDMSQGFVRRENSGIS-----------PNIPPTPLEDLSGVTVKRGFLEDSNANSM 207 + ++ Q + + + +++ + V +G+LE SN N Sbjct: 181 RVVQIERPQLLEAVGENLYTLKAGIEKGQALRDAAGLTVQEQGKLKVMQGYLEQSNVNLS 240 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 EM ++I++ + F + + ++ M N+ Sbjct: 241 DEMTELINVQRAFQLSSRAVTSSDSMMG-LANNLR 274 >gi|326796596|ref|YP_004314416.1| flagellar basal-body rod protein FlgF [Marinomonas mediterranea MMB-1] gi|326547360|gb|ADZ92580.1| flagellar basal-body rod protein FlgF [Marinomonas mediterranea MMB-1] Length = 245 Score = 134 bits (337), Expect = 9e-30, Method: Composition-based stats. Identities = 50/237 (21%), Positives = 98/237 (41%), Gaps = 6/237 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + ++ + A+N++N T GFR + + + D + Sbjct: 1 MDRALYLAMSGGTQVMNAQGIHANNLANVATTGFRADFEQARSM--QVNGDYYPSRVYAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + E G I TG ++D A++GD + A + TR G ++T G LV+ +G Sbjct: 59 TENPGTRMERGVMIETGRDMDVAIQGDGFIAAMDATGQEVYTRAGDLQLTSAGQLVTGTG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176 + V + + + G I Q G T + V+ + + N G Sbjct: 119 LPVLGSAGPVFLPPLDALHVGSDGTISFIPQGGDATQTTSIGRIKLVNTDGENLTKGNDG 178 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 + PL++ + + + GFLE SN N++ EM +++ L ++F ++D ++ Sbjct: 179 LLRTKNGLPLDEDNNIKLISGFLEGSNVNAVEEMTEIMELARRFEMNIKVMDSVRQN 235 >gi|121534935|ref|ZP_01666754.1| protein of unknown function DUF1078 domain protein [Thermosinus carboxydivorans Nor1] gi|121306534|gb|EAX47457.1| protein of unknown function DUF1078 domain protein [Thermosinus carboxydivorans Nor1] Length = 247 Score = 134 bits (337), Expect = 9e-30, Method: Composition-based stats. Identities = 45/251 (17%), Positives = 93/251 (37%), Gaps = 15/251 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDI----- 52 M + LA R A+N++N +T G++ F+ ++ + ND Sbjct: 1 MIRGIYTAASGMLAEAIRADVTANNLANANTAGYKKDVALSRDFAGILISRINDGPDAPV 60 Query: 53 -DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDD 111 G STG LD A++G +F + +P G+ TR+G F + Sbjct: 61 IGSLGLGAVVDNVATIHTAGMMRSTGNALDLAIDGRGFFVVATPAGLRYTRNGAFTRNSE 120 Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171 G LV+ +G + V + + G + + + + + V+ Sbjct: 121 GELVTQAGYRVMGQAGPVRL---NSGAKVTIDADGRVFVDEVEVDRLQVVDFPDQRALVK 177 Query: 172 RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 +S + V++G LE +N N + EM +I + + ++ ++ Sbjct: 178 EGDSLFAAPGAAPQAGSG---QVRQGVLELANVNVVAEMVNLIAGYRAYEINAKMVQTHD 234 Query: 232 KSMLEAIRNIA 242 + + +A+ + Sbjct: 235 QLLDKAVNEVG 245 >gi|297531534|ref|YP_003672809.1| fagellar hook-basal body protein [Geobacillus sp. C56-T3] gi|297254786|gb|ADI28232.1| fagellar hook-basal body protein [Geobacillus sp. C56-T3] Length = 273 Score = 134 bits (337), Expect = 9e-30, Method: Composition-based stats. Identities = 60/273 (21%), Positives = 107/273 (39%), Gaps = 31/273 (11%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S AL++RL T++ N++N++TVGF+ + F+E++ + + Sbjct: 1 MLRSMLTAANTMNALQERLDTISHNIANSNTVGFKRREASFAELLTQQIDRLPNDEAPRQ 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALE-GDAWFA-----LESPRGIILTR 102 + + L + G+ + TG LDFAL + WF I TR Sbjct: 61 TPEGVRYGNGARLASTMLITKQGALVETGRRLDFALTAENQWFRVRLADQNGAETIGYTR 120 Query: 103 DGRFKVTDDGSL--VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG-----KVI 155 G F + ++ S VLD + PI +P V G ++ Sbjct: 121 AGNFSLAPMNGELALTTSDGLFVLDERNAPIVLPADAHDVQVSPTGTLTATNADGRVVAR 180 Query: 156 ATMGLYSVDMSQGFVRRENSGIS-PNIPPTPLEDL----SGVTVKRGFLEDSNANSMYEM 210 +G+ + Q R + + PN+P E ++VK+G LE SN + EM Sbjct: 181 VNLGVTVIRRPQLLEARGGNVYALPNVPGAAEELNGNLRGQISVKQGALEQSNVDLGEEM 240 Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 ++ ++ + I +E+ + I + S Sbjct: 241 VGLMATSRAYQLNARAISISEQMLG-LINGMRS 272 >gi|163782129|ref|ZP_02177128.1| flagellar hook basal-body protein FlgG [Hydrogenivirga sp. 128-5-R1-1] gi|159882661|gb|EDP76166.1| flagellar hook basal-body protein FlgG [Hydrogenivirga sp. 128-5-R1-1] Length = 242 Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats. Identities = 49/245 (20%), Positives = 101/245 (41%), Gaps = 20/245 (8%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 I + L E++L+ +N++N DT F+ V+ S + + + Sbjct: 8 LFILSSGMLLQERKLAVTTNNLANLDTPSFKRDFVEVSSWYTDMGAQVPNLSPENPTNNF 67 Query: 65 YLSKEVGSF--------ISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVS 116 F TG D A+EG+ +FA+ +P G++ TR G F++ +G LV+ Sbjct: 68 VYPMMTRIFTDLSQGSLRETGNTFDLAIEGEGFFAVRTPEGVMYTRKGNFRLDSEGFLVT 127 Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 G + + + ++ +G + G ++T+G++++ +Q +G Sbjct: 128 EKGYRVLDRANDEVKVVGNRVDV---DREGNVYVDGIRVSTLGVWALPDAQKVGEDLFTG 184 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 +V++GF+E SN N + EM ++I ++ + LI ++ Sbjct: 185 TPQPAEGF--------SVRQGFIELSNVNGIVEMVRLIETSRAHETYARLIQAVDEV-QN 235 Query: 237 AIRNI 241 + I Sbjct: 236 RVNTI 240 >gi|332140547|ref|YP_004426285.1| flagellar basal-body rod protein FlgF [Alteromonas macleodii str. 'Deep ecotype'] gi|327550569|gb|AEA97287.1| flagellar basal-body rod protein FlgF [Alteromonas macleodii str. 'Deep ecotype'] Length = 247 Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats. Identities = 54/241 (22%), Positives = 89/241 (36%), Gaps = 7/241 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M I + A+N++N T GFR + + + F Sbjct: 1 MDKLLYISASGASQDLLGTGIRANNLANAQTTGFRAQLEQARSM--PAYGEGLPTRVFSM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119 + + E G I T +LD A++GD WFA + +RDG FK+ DDG L Sbjct: 59 TESPSNNYESGPMIKTDRDLDVAIQGDGWFAVQDQNGQEAYSRDGNFKLGDDGILTDIHD 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 + + D + + +P + + Q G + V + + R N Sbjct: 119 RVVLGDNGPIFLPVPLDNLNIAADGTLSMRQLGAPANVIEEVGRLKLVSPNYADMERGND 178 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 G+ + + V V G LE SN N++ EM MI L + + ++ + EK Sbjct: 179 GLFRMEDGSIAPANANVKVMSGMLEGSNVNAVDEMVDMISLQRHYELQVKMMKQAEKLDQ 238 Query: 236 E 236 Sbjct: 239 S 239 >gi|166712061|ref|ZP_02243268.1| flagellar basal body rod protein FlgF [Xanthomonas oryzae pv. oryzicola BLS256] Length = 251 Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats. Identities = 56/245 (22%), Positives = 96/245 (39%), Gaps = 10/245 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + A Q STV+ N++N DTVGF+ I+ Sbjct: 1 MDKALYVAMTGARASLQAQSTVSHNLANVDTVGFKAALANTEAF--KIQGKGYPSRIDAL 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + G TG LD +L+ D W A++SP TR+G +T + LV+A+G Sbjct: 59 HVDQGFDRSQGHQKVTGNPLDVSLQQDRWLAVQSPDGSEAYTRNGELALTANSQLVTANG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG----LYSVDMSQGFVRRENS 175 + + + P + I +G+ TM + VD + R Sbjct: 119 HAVLDEGGNPMTIPPHQAMEIGSDGSISIIPQGEGPQTMAIVGKMKVVDAPADRLTRRPD 178 Query: 176 GISPNIPPTPLEDLSGVT---VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 G+ N P + + T + G LE SN ++ + +MI L ++F +I + Sbjct: 179 GLMRNTSTDPAQAFAVSTGKTINSGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNGDD 238 Query: 233 SMLEA 237 + A Sbjct: 239 NAQSA 243 >gi|94495410|ref|ZP_01301990.1| flagellar basal-body rod protein [Sphingomonas sp. SKA58] gi|94424798|gb|EAT09819.1| flagellar basal-body rod protein [Sphingomonas sp. SKA58] Length = 247 Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats. Identities = 55/239 (23%), Positives = 92/239 (38%), Gaps = 6/239 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M N L A R +++A+N++N +TVGFR I+ + + + Sbjct: 1 MDRLVNTALTAMRGAMARQASIANNLANANTVGFRAEIANAET--RWIQGESFDTRAQAS 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASG 119 G+ TG LD AL+GDA ++ + TR G KV+D G L + G Sbjct: 59 EQVIAADMAQGAVTETGNPLDVALDGDALLTVQATDGSEAYTRRGDLKVSDSGLLTTGDG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176 + + V + I G + Q G + V+ + + + N G Sbjct: 119 LPVLGEGGPVILPQMDSVSIAKDGSIWGVPQGGDPANPQQVDKLKLVNAAGSSIAKGNDG 178 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 + + L TV G LE SN NS + MI ++ + + +ID ++ Sbjct: 179 LFREVNGGALPSDPLATVTSGSLEGSNVNSTQALIDMIEASRAWETQVKMIDTAKQLDD 237 >gi|254499121|ref|ZP_05111811.1| putative flagellar basal body rod protein [Legionella drancourtii LLAP12] gi|254351660|gb|EET10505.1| putative flagellar basal body rod protein [Legionella drancourtii LLAP12] Length = 237 Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats. Identities = 50/242 (20%), Positives = 100/242 (41%), Gaps = 9/242 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + A + +L +++ N+SN +T GF+ ++ + ++ +++Q Sbjct: 1 MFDAITATQLAMDYDQLKLQSISQNISNMNTPGFKRQLIENAGFDMHLQANVNQ---VAQ 57 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 ++ K G T D AL G+ +F ++ +GI TR G F+V + G L +A+G+ Sbjct: 58 QLEQSHLKAQGLINQTKNPTDLALCGEGYFQVQGEQGIFYTRRGDFQVNNQGELTTATGE 117 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 + I D F V +G + + + + Q N + Sbjct: 118 TVL----GKGGVIKVDDHAFTVDAQGALFIDHHKVDQLNIVQFKQPQLLRYSGNGLYQCD 173 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 P+ + V +GF+E SN S+ EM M+ ++ F + ++ + + AI Sbjct: 174 DS--PIPVGANTQVHQGFIEQSNVKSIDEMMDMVKTSRHFEANQRIMRTADNLLATAINQ 231 Query: 241 IA 242 + Sbjct: 232 LG 233 >gi|330721007|gb|EGG99168.1| Flagellar basal-body rod protein FlgF [gamma proteobacterium IMCC2047] Length = 246 Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats. Identities = 50/237 (21%), Positives = 100/237 (42%), Gaps = 6/237 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M S I + + + + A+N++N +T+GFR+ + + + + + Sbjct: 1 MDKSLYIAMTGAVQNARGTAIHANNLANVNTMGFRSDYAQARAM--PVYGETYASRVYAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119 + G+ + TG ELD A+ G+ W A+++P G TR G KV G L + +G Sbjct: 59 EENPGTNFAYGTLVETGNELDVAVNGEGWIAVQTPDGGEAYTRAGEMKVDSLGILRNGNG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNV---GEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + + + ++ I +G + G + + V+ + + N G Sbjct: 119 LPVMGQGGPIALPPFERITIGQDGTISIQGAGANPGSLSQVDRIKLVNPDASQLYKGNDG 178 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 + + V V GFLE SN NS+ + ++I L+++F ++ E++ Sbjct: 179 LMRQRDGQAAPADAAVGVSAGFLEGSNVNSVEALTELISLSRQFELHVKMMKTAEEN 235 >gi|296282279|ref|ZP_06860277.1| hypothetical protein CbatJ_01595 [Citromicrobium bathyomarinum JL354] Length = 269 Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats. Identities = 46/265 (17%), Positives = 85/265 (32%), Gaps = 29/265 (10%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG--AIKNDIDQKISFVAS 61 SF L + L T+A N++N++T GF+ + +F+E+V A+ N + + Sbjct: 2 SFYTSLNGLKNAQSSLGTIAHNIANSETYGFKRGRTEFAEIVAGSALSNPRTIQGIGSSV 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASGK 120 + +G TG+ LD A+ GD +F + G + TR G F + + G +V G Sbjct: 62 EAITQNFSLGPIEQTGSALDMAITGDGFFTMRGENGGTLYTRAGSFTINESGGIVDNDGN 121 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQ---------------------KGKVIATMG 159 + + + + Sbjct: 122 RLQAYAVDANGDPTSNALQDVQIPVTNAAGAEYAGVTVGSDGVIRASYADGSNQPVGMVA 181 Query: 160 LYSVDMSQGFVRRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMI 214 L + G +S + + G LE SN + E+ +I Sbjct: 182 LATFMAPNGLKPVGSSNWESTGFSGAASYGEPGNGQYGALLSGSLERSNVDIAEELVGLI 241 Query: 215 HLTQKFNSITTLIDENEKSMLEAIR 239 + F + ID + + Sbjct: 242 TAQRNFQANAKAIDTATQISQTVMN 266 >gi|325288803|ref|YP_004264984.1| fagellar hook-basal body protein [Syntrophobotulus glycolicus DSM 8271] gi|324964204|gb|ADY54983.1| fagellar hook-basal body protein [Syntrophobotulus glycolicus DSM 8271] Length = 299 Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 46/294 (15%), Positives = 92/294 (31%), Gaps = 56/294 (19%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S ++ + + + +N++N +TVG++ + FS ++ Sbjct: 1 MMRSLYSAISGLKNEQIAMDVIGNNIANVNTVGYKYSRTGFSTMLSQSMRGASAPDTADP 60 Query: 54 ---------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRD 103 Q A G G STG D L+G+ +F L+ G + +R+ Sbjct: 61 STYGGTDGIQIGLGSAIGSIDQIMTQGGSQSTGKNTDLMLQGEGFFMLQDSNGNVYLSRN 120 Query: 104 GRFKVTDDGSLVSASGKYPVLD----------------------------------MASV 129 G FK G+LV AS + V + Sbjct: 121 GNFKTDGAGNLVDASTGFIVQGYENDGSDPWDTLANINLAIGRSDPEGGTNTLSSFEINS 180 Query: 130 PIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL 189 I + + + + + + + G N+ + ++ Sbjct: 181 QGIIMGTFTDSDSTDGTTDPAYTVPLYQIAVATCNNPSGLTPVGNNYYQESPNSGEVKIN 240 Query: 190 SGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 ++ G LE SN N + MI + F + + +I ++ + E + Sbjct: 241 VAGENGNRSISTGCLEMSNVNLSEQFTDMIVTQRGFQANSRVITVSDSMLQELV 294 >gi|213161842|ref|ZP_03347552.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] Length = 232 Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 41/232 (17%), Positives = 76/232 (32%), Gaps = 20/232 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M +S I A + + +A+N++N T GF+ + F +++ Sbjct: 1 MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V G+ T D A++G +F + P G TRDG F Sbjct: 61 TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGTSAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V +G LV+A G + + V + + + L + Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQ 212 G + + + + +G++E SN N E+ Sbjct: 181 DTGLESIGENLYIETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVN 232 >gi|147678401|ref|YP_001212616.1| flagellar basal body rod protein [Pelotomaculum thermopropionicum SI] gi|146274498|dbj|BAF60247.1| flagellar basal body rod protein [Pelotomaculum thermopropionicum SI] Length = 256 Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 39/256 (15%), Positives = 85/256 (33%), Gaps = 15/256 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA----------IKN 50 M + + + A R+ +A +++N G++ + +F+E+V + Sbjct: 1 MLKALSSAVTGLNAQRTRVDAIAVDLANIAAAGYKRNRTRFAELVSQEIEKQGIPVAAEG 60 Query: 51 DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVT 109 + S V + G + T D +EG+ +F + P + TR+G F Sbjct: 61 RPARAGSGVRAESADKVLLAGETVKTERPFDLLIEGEGYFRVVLPGGEEVYTRNGCFTYD 120 Query: 110 DDGSLVSASGKY---PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 +G+L +SG L + + + + I + + Sbjct: 121 KEGNLYCSSGYRLEGVSLPEGWDKVIVSPDGRVSAEKDGSVIDAGQITLYRFSSMAALKP 180 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 G + P +++G+LE SN + E+ +I + Sbjct: 181 AGSFHFYLDEEAGEAIPGTPGSEGFGVIRQGYLETSNVDLTGEITGLIEAQTVYGFNARS 240 Query: 227 IDENEKSMLEAIRNIA 242 + ++ M N+ Sbjct: 241 VRIVDE-MWGMANNLR 255 >gi|307293786|ref|ZP_07573630.1| flagellar basal-body rod protein FlgF [Sphingobium chlorophenolicum L-1] gi|306879937|gb|EFN11154.1| flagellar basal-body rod protein FlgF [Sphingobium chlorophenolicum L-1] Length = 246 Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 55/239 (23%), Positives = 91/239 (38%), Gaps = 6/239 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M N L A R + +++N++N +T GFR IK D + + Sbjct: 1 MDRLVNTALTAMRGAMARQAAISNNLANVNTTGFRAEIANAET--RWIKGDNLNTRAQAS 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119 G+ TG LD A+ GDA A+++P G TR G KV+D G L + G Sbjct: 59 EQVVAADMAQGAVTETGNPLDVAMNGDAMLAVQAPDGGEAYTRRGDLKVSDSGLLTTGDG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176 + + + + I G + Q G + V + + G Sbjct: 119 LVVLGEGGPITLPQMDSISIARDGSIWGVPQGGDPANPQQVDKLKLVSPVGSSIAKGTDG 178 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 + + L D +V G LE SN N+ + QMI ++ + + +ID ++ Sbjct: 179 LFREVNGGALPDDPLASVTGGSLEGSNVNATSALVQMIEASRAWETQVKMIDTAKQLDD 237 >gi|225158947|ref|ZP_03725259.1| protein of unknown function DUF1078 [Opitutaceae bacterium TAV2] gi|224802442|gb|EEG20702.1| protein of unknown function DUF1078 [Opitutaceae bacterium TAV2] Length = 261 Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 52/260 (20%), Positives = 100/260 (38%), Gaps = 20/260 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV--------KFS---------E 43 M A+ ALE+ V N+S++ T F+ V +F Sbjct: 1 MNIGIYQNAASLNALERWQDVVTQNISSSQTAAFKRRTVQVTGNYSGEFQLPRPTAFAPA 60 Query: 44 VVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTR 102 GA + D + + +S G T ELD AL GD +F + G I+ TR Sbjct: 61 HPGATGSSGDTRRAVFPLTNINISLTPGEAQPTRGELDIALPGDGFFKVRDASGVILYTR 120 Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLY 161 G +++ + +LV+A G + D + + + G ISQ +I +G+ Sbjct: 121 AGSLQISPERTLVTAQGMDVLSDADTPIQLETESTTSSLVFNDDGTISQGETIIGRLGIV 180 Query: 162 SVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221 + + P + V +G++E SN + + EM +I +++ + Sbjct: 181 TFANPTLLTPISGGLFTAPPAAGPQQMDEPG-VIQGYIESSNVSQLREMVDLITISRAYE 239 Query: 222 SITTLIDENEKSMLEAIRNI 241 + +I + ++ + + + Sbjct: 240 ANQKMIQSRDDTIGKTLEAL 259 >gi|297183135|gb|ADI19278.1| flagellar basal body rod protein [uncultured delta proteobacterium HF0200_39L23] Length = 258 Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 58/256 (22%), Positives = 109/256 (42%), Gaps = 28/256 (10%) Query: 9 LAAQLAL-------EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ------- 54 ++ +L E+++ TVA+N++N TVGF+ + F EV+ ++ + Q Sbjct: 1 MSGLTSLVQAGGVLEKKIETVANNLANVSTVGFKEDQPSFREVLSTVQRVVPQSEEENFL 60 Query: 55 -----------KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103 S V + + G F TG ELD +LE + +F + +P+G TR Sbjct: 61 SHEYLDEYVGMDKSAVMVDEIGKNFTTGRFRDTGNELDLSLENEGFFTITTPQGDRYTRA 120 Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 G FK+ G +V+ G + + I+ + V E G++ +G ++ + Sbjct: 121 GNFKLDSQGRMVTQDGFPLLGKKGPIQIK---GNGPIQVDENGQVVVEGTIMDQLKTVRF 177 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223 + N +P + V++G LE SN N++ EM +M++ T+ + + Sbjct: 178 RNQDQLQKLGNHFYAPIRSDDVPIPSREILVRQGMLEQSNVNTVMEMSRMVNATRSYEMV 237 Query: 224 TTLIDENEKSMLEAIR 239 I + +AI Sbjct: 238 QKAIMNLDNIDEKAIS 253 >gi|94500242|ref|ZP_01306775.1| flagellar basal-body rod protein FlgF [Oceanobacter sp. RED65] gi|94427541|gb|EAT12518.1| flagellar basal-body rod protein FlgF [Oceanobacter sp. RED65] Length = 249 Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 42/246 (17%), Positives = 93/246 (37%), Gaps = 9/246 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + I ++ + A+N++N T GFR + + + D ++ Sbjct: 1 MDRALYIAMSGAKQNTLGQTAEANNLANVSTTGFRRDFEQARSM--PVFGDYYPTRAYAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASG 119 + G + TG +LD A++ WFA+ ++ TR G F+V G LV+ Sbjct: 59 EERPASDFNPGPLVETGNDLDLAIDNQGWFAVLDANGNEAYTRRGDFQVDGLGRLVNGQN 118 Query: 120 KYPV---LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + + + P + Q V +G + + + V+ + + G Sbjct: 119 QQLIGAGGPIVLPPYEKVQIAADGTVSIQGVGEEPAVIAGIEQIKLVNPDLTQMEKGEDG 178 Query: 177 ISPNIPPTP---LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 + P V V G++E SN ++++ + Q++ L +++ ++ +++ Sbjct: 179 LFRLRDAEPGAIQPADPTVQVASGYVEGSNVSAVHSLTQIMSLHRQYEMQVKMMSTADEN 238 Query: 234 MLEAIR 239 Sbjct: 239 AQTTAS 244 >gi|58039418|ref|YP_191382.1| flagellar basal-body rod protein FlgF [Gluconobacter oxydans 621H] gi|58001832|gb|AAW60726.1| Flagellar basal-body rod protein FlgF [Gluconobacter oxydans 621H] Length = 246 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 66/245 (26%), Positives = 109/245 (44%), Gaps = 8/245 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56 M+ S I L+ A ++ +S VA NMSN TVG++ V FS+ + + Sbjct: 1 MENSTYIALSRMDAQQRAMSVVAANMSNASTVGYKRENVLFSDFLSHQHGSKQPEGADTE 60 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVS 116 S+ Y + G STG LD AL G+ +F + + G+ LTR GRF+ DG++V Sbjct: 61 SYTQDRATYRDFQQGDMQSTGNPLDLALGGEGYFQVRTANGVRLTRAGRFEEQQDGAIVD 120 Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 +G LD PI++PQ D + G IS + +G+ + + + Sbjct: 121 ENGNAL-LDRDGQPIELPQTDHRITISADGVISTETGEQGQIGIVTAQDNNRLQAEGSRL 179 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + + P + + +G +E SN M E+ QM+ + + F+ + +D Sbjct: 180 LRSD---QPTTAVERPNIVQGMVEGSNVQMMTEVTQMMEIQRNFDFMAQFVDAEATRQKN 236 Query: 237 AIRNI 241 AI I Sbjct: 237 AIDKI 241 >gi|196249721|ref|ZP_03148417.1| protein of unknown function DUF1078 domain protein [Geobacillus sp. G11MC16] gi|196210597|gb|EDY05360.1| protein of unknown function DUF1078 domain protein [Geobacillus sp. G11MC16] Length = 273 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 59/273 (21%), Positives = 106/273 (38%), Gaps = 31/273 (11%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S + AL+QRL T++ N++N++T GF+ + F+E++ + + Sbjct: 1 MLRSMHTAANTMNALQQRLDTLSHNIANSNTTGFKRREASFAELLTQQVDHLPDDEAPRQ 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFAL-EGDAWFALESPR-----GIILTR 102 + + L G TG LDFA + WF + I TR Sbjct: 61 TPAGMRYGNGAGLASTMLVTAQGPLTETGRALDFAFAAANQWFRVRVTDGNGVATIGYTR 120 Query: 103 DGRFKVTDDGSLVS--ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 G F +T G ++ S PVLD + PI++P F + G ++ + Sbjct: 121 AGNFSLTPIGGRLALVTSDGRPVLDETNAPIELPAHATDFQLSPTGTLTATDANGVVVAR 180 Query: 161 YSVD-----MSQGFVRRENSGIS-PNIPPTPLEDLSGVT----VKRGFLEDSNANSMYEM 210 ++ Q ++ + P P E + +K+G LE SN + E+ Sbjct: 181 VNLGVTVIRRPQLLEALGDNFFTLPTAPGATQELNGNLRSQIAMKQGALEQSNVDLGEEL 240 Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 ++ T+ + I +E+ + I N+ S Sbjct: 241 IGLMATTRAYQLNARAISISEQMLG-LINNLRS 272 >gi|238923132|ref|YP_002936645.1| flagellar basal body and hook protein [Eubacterium rectale ATCC 33656] gi|238874804|gb|ACR74511.1| flagellar basal body and hook protein [Eubacterium rectale ATCC 33656] gi|291523979|emb|CBK89566.1| fagellar hook-basal body proteins [Eubacterium rectale DSM 17629] Length = 266 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 59/266 (22%), Positives = 109/266 (40%), Gaps = 26/266 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVV---------GAI 48 M + +R+ +A+N++N+DT GF+ F + + Sbjct: 1 MVKGLYTAHTGMVNEMKRMDVLANNLANSDTYGFKKEGTTSHSFKNELAIKIKDTSNYGL 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-----PRGIILTRD 103 ++ V G+ Y + GSF T D A+ G +FA+ + TRD Sbjct: 61 HKNLGSMTYGVHLGETYTDWDEGSFKVTDNPTDLAIGGKGFFAVAFTDKSGQTSVKYTRD 120 Query: 104 GRFKVTDDGSLVSASGKYP-------VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156 G FKV DG LV+A G + D +E F+V G I+Q +++ Sbjct: 121 GAFKVNADGYLVTADGDHVLNATGALSGDGGEANWVKVDPNEKFSVNSLGYITQNNQLVG 180 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 T+G+ VD + + + + + +++G LE SN N + EM MI + Sbjct: 181 TIGVVDVDNYDYIEKYGENLYNLTAGGNIIASDAE--IEQGALETSNVNVVNEMVNMITI 238 Query: 217 TQKFNSITTLIDENEKSMLEAIRNIA 242 + + + +I ++++ +A+ N+ Sbjct: 239 QRAYEAGQKVITSIDETLDKAVNNVG 264 >gi|258404726|ref|YP_003197468.1| fagellar hook-basal body protein [Desulfohalobium retbaense DSM 5692] gi|257796953|gb|ACV67890.1| fagellar hook-basal body protein [Desulfohalobium retbaense DSM 5692] Length = 243 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 49/241 (20%), Positives = 93/241 (38%), Gaps = 6/241 (2%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV-GAIKNDIDQKISFVAS 61 + L+ RL +++N++N D GF+ ++ F + A + S + Sbjct: 5 SGLAAPLSGAALERTRLQVLSNNLANIDNAGFKQDRLLFETQLDNAQAGRTGEGTSRLQM 64 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 + G TG LD A++G +F + + G TR G F + DG+LV+ +G+ Sbjct: 65 TSTHTDFSQGGLQHTGRPLDLAIKGGGFFKVATDDGFAYTRHGSFVLQPDGALVTPTGEQ 124 Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 V + V + GE G + LY+VD Q ++ + Sbjct: 125 VVGETGPVNLTDSNVRISEEGSVFGE---NGVEQGQLDLYTVDDLQQLEKQGANLWRRP- 180 Query: 182 PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 ++ T+ +G LE SN +++ ++I + F S I + + + Sbjct: 181 EGVSERVVAESTLHQGQLESSNVSAIEMTTELIQAERGFQSFQKAIKAYDTVAQKT-NTV 239 Query: 242 A 242 Sbjct: 240 G 240 >gi|95929873|ref|ZP_01312614.1| flagellar basal body rod protein [Desulfuromonas acetoxidans DSM 684] gi|95134169|gb|EAT15827.1| flagellar basal body rod protein [Desulfuromonas acetoxidans DSM 684] Length = 242 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 53/246 (21%), Positives = 104/246 (42%), Gaps = 8/246 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV-GAIKNDIDQKISFV 59 M + L+ +A Q + V +N+SN +T+G++ +V+FS V+ A +N +++ Sbjct: 1 MSSGIYATLSGAVARMQTVDVVTNNLSNANTLGYKKDRVQFSAVLDSAKQNQQAGGVNYS 60 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG--IILTRDGRFKVTDDGSLVSA 117 G I T E D A+ G+ +F + +P I TR G DG+L++ Sbjct: 61 YVEVAKTDYSQGVLIDTRNEYDVAINGNGFFKVRNPDDGEIYFTRLGALDREPDGTLITR 120 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177 +G++ + I + F + E+G I V+ + L +++ N Sbjct: 121 TGEFVLSP---ANETIVLPEGDFVIDERGRILGNEGVVDELALVD-PDPDLLIKQGNGRY 176 Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 S + + + + V +G LE SN ++ E M+ + F + + ++ Sbjct: 177 SYDGDMRVVPNSTDSQVMQGHLEQSNVKAIEETTLMMTSLRAFENYQKAMKNYF-TLESK 235 Query: 238 IRNIAS 243 + I S Sbjct: 236 VNEIGS 241 >gi|257095358|ref|YP_003168999.1| flagellar basal-body rod protein FlgF [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047882|gb|ACV37070.1| flagellar basal-body rod protein FlgF [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 249 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 55/247 (22%), Positives = 95/247 (38%), Gaps = 8/247 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M ++ + VA N++N TVG+R ++ +F V I +F Sbjct: 1 MDRLIYTAMSGAKQGLLLQAGVAQNLANATTVGYRAMENRFRAV--PILGSGLATRAFAV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G+ STG LD A+ G W A++ P TR G K +G L ++SG Sbjct: 59 DASVANVFQEGALTSTGRPLDVAVRGQGWIAVQGPDGREAYTRAGNLKADANGVLQTSSG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG-----KVIATMGLYSVDMSQGFVRREN 174 + + + + I G I + G V + V+ + + R + Sbjct: 119 LDVLGEGGPIALPPDNNIAIAADGTVSAIPRLGAGAINNVNVVGRIKLVNPPESDLVRGD 178 Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 G+ P VT+ LE SN NS+ M +MI L ++F ++ + + Sbjct: 179 DGLFRTRDGVPAVADETVTLAPEALEGSNVNSVDAMVRMISLARQFEMQIKMLQTADGNA 238 Query: 235 LEAIRNI 241 A + + Sbjct: 239 RAATQLL 245 >gi|114320058|ref|YP_741741.1| flagellar basal-body rod protein FlgF [Alkalilimnicola ehrlichii MLHE-1] gi|114226452|gb|ABI56251.1| flagellar basal-body rod protein FlgF [Alkalilimnicola ehrlichii MLHE-1] Length = 246 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 47/246 (19%), Positives = 94/246 (38%), Gaps = 6/246 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + N++N DT GFR + ++ ++ Sbjct: 1 MDRLVYLAMTGAKHTLEAQQHNNHNLANVDTPGFRADLDAL--MSAPVRGPGHDARAYSE 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119 + G + TG LD A++GD W A+++P G TR G ++ D G L + G Sbjct: 59 ALTVGSDFRQGGIVQTGRALDVAIDGDGWLAVQAPDGGEAYTRRGDLQIADGGLLTTGDG 118 Query: 120 KYPVL---DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + +A P + + + + L VD + +R++N G Sbjct: 119 HLVMGEAGPVAIPPADEIEIGADGTLSIIPAGQNPDQWVELDRLKLVDPALQDLRKDNDG 178 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + + E +GV + G E SN N + + +MI ++F + ++ E++ Sbjct: 179 LFRLVDGGEAEADAGVRLVSGAYEGSNVNMVDALVKMIDHARQFETYVKMMTAAEENDQT 238 Query: 237 AIRNIA 242 + + + Sbjct: 239 SAQLLR 244 >gi|54307271|ref|YP_128291.1| FlgF flagellar basal-body rod protein [Photobacterium profundum SS9] gi|46911691|emb|CAG18489.1| Hypothetical FlgF flagellar basal-body rod protein [Photobacterium profundum SS9] Length = 244 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 49/243 (20%), Positives = 86/243 (35%), Gaps = 5/243 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M ++ + A+N++N +T GFR + V A+K + + + VA Sbjct: 1 MDKMLFTAMSGASRVMMAQQVHANNLANVNTAGFRADIEQAESV--AVKGNGFETRTLVA 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119 + G+ T D A+ GD +FA+E+ TR G F + +G+L+ Sbjct: 59 ARAGGTDFSHGALQHTDNPFDMAIRGDGFFAVEAGDNDEAYTRTGNFHLDAEGTLLLGDR 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS-QGFVRRENSGIS 178 V + Q D + V L V + E+ Sbjct: 119 PVLSTGGPIVIPEYQQLDIGADGTISIVPLGSSLVQEVGQLKLVKPDLANLHKSEDGLFR 178 Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 E VTV G++E SN N++ M + L++ F ++ E + A Sbjct: 179 VAGQGGQAEADENVTVASGYIETSNVNAVESMINNMSLSRNFEFQIKMMKTAED-LASAG 237 Query: 239 RNI 241 + Sbjct: 238 NRL 240 >gi|149375033|ref|ZP_01892806.1| Flagellar basal body rod protein [Marinobacter algicola DG893] gi|149360922|gb|EDM49373.1| Flagellar basal body rod protein [Marinobacter algicola DG893] Length = 250 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 45/252 (17%), Positives = 102/252 (40%), Gaps = 13/252 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + +G++ A+N++N T GF+ + + + + ++ Sbjct: 1 MDKALYLGMSGAKQNMLSQRAHANNLANVSTTGFKADFAQARSM--PVFGEHHPTRAYAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + G+ + TG +LD A+EGD W A+++ + + TR G ++ +G + +SG Sbjct: 59 AERPGTDLSAGALMDTGRKLDVAVEGDGWLAVQNQQGEEVFTRSGSMQIDVNGLMRLSSG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV---IATMGLYSVDMSQGFVRRENSG 176 + + + V + +I G + G + L V+ + + + G Sbjct: 119 EMVMGNGGPVALPPFDNVQIGADGTISVVPVGGPPDQLVEVDRLKLVNPPRDALEKGVDG 178 Query: 177 ISP----NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 P + + V GFLE SN N++ EM + L++++ ++ + Sbjct: 179 FIRRKADQALDGPEPPDATMRVASGFLESSNVNAVEEMISNLQLSRQYEMQVKIMTTANE 238 Query: 233 SML---EAIRNI 241 + ++N+ Sbjct: 239 NAEASARLLQNL 250 >gi|304310886|ref|YP_003810484.1| Flagellar basal body rod protein [gamma proteobacterium HdN1] gi|301796619|emb|CBL44831.1| Flagellar basal body rod protein [gamma proteobacterium HdN1] Length = 245 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 44/247 (17%), Positives = 96/247 (38%), Gaps = 6/247 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M I + T A+N++N T GF+ ++ + + + Sbjct: 1 MDKGLYISMTGAREALLSQDTHANNLANASTTGFKADYQQYRSM--QVFGSYYPSRVYAQ 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASG 119 + + G++++TG LD A+ G W A+ ++ TR G + +G+LV+ SG Sbjct: 59 TERPGTDMRGGNYMTTGRNLDVAVRGKGWIAVLDAEGKEAFTRAGDLERDLNGTLVTGSG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176 + + + + QK E+ G + + + + V+ + + G Sbjct: 119 LAVMGNDGPIVLPEYQKIEVGMDGSISVRALGEDALGMVEVNRIRLVNPDPKALEKGEDG 178 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + + E + V + G LE SN N + E+ +I ++ ++ +++ Sbjct: 179 LFRMRDGSEPEASAEVALANGMLESSNVNPVSELTSVITSSRLMELNVKMLATYKENDQV 238 Query: 237 AIRNIAS 243 A R + + Sbjct: 239 AARILQA 245 >gi|189426344|ref|YP_001953521.1| hypothetical protein Glov_3295 [Geobacter lovleyi SZ] gi|189422603|gb|ACD97001.1| protein of unknown function DUF1078 domain protein [Geobacter lovleyi SZ] Length = 296 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 46/288 (15%), Positives = 92/288 (31%), Gaps = 52/288 (18%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + G++ LA + L+ + +N+SN++T+GF+ ++ FS+++ A + Q V K Sbjct: 6 AMFTGVSGLLANAEGLNVIGNNLSNSNTIGFKGGRMLFSDLLSAPIGNNSQVGRGVQIQK 65 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESP----------RGIILTRDGRFKVTDDGS 113 GS ST D A++GD +F+ P +R G ++ + Sbjct: 66 VDNLFSQGSLESTTVVTDLAIQGDKFFSFAVPGTTAAAAIAVTDAYYSRAGALRIDSNNR 125 Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM--------------- 158 + Y LD P+ + G Sbjct: 126 SLINPDGYVALDENRQPVVFVSTYTDTSGNVLDFQKVAGVDAQGRLQLLYADNNGNSSKV 185 Query: 159 -------------------GLYSVDMSQGFVRRENSGISPN--------IPPTPLEDLSG 191 G + G + ++ P + + Sbjct: 186 YYAGNGVVPVPTTTGAIGLGTARIPNPPGLEKVGSTLFKSTGNAVGGSGTPIVTRSNGTN 245 Query: 192 VTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + LE SN + EM +MI + +++ + I ++ E + Sbjct: 246 EKILSNNLELSNVDMATEMVKMILTQRAYSANSKTITTADEMTQEVLN 293 >gi|285018208|ref|YP_003375919.1| flagellar basal-body rod protein flgf [Xanthomonas albilineans GPE PC73] gi|283473426|emb|CBA15931.1| probable flagellar basal-body rod protein flgf [Xanthomonas albilineans] Length = 251 Score = 133 bits (333), Expect = 3e-29, Method: Composition-based stats. Identities = 53/247 (21%), Positives = 92/247 (37%), Gaps = 14/247 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + A Q TV+ N++N +T GF+ I+ Sbjct: 1 MDKALYVAMTGARASLQAQGTVSHNLANVETAGFKAQLANTEAF--RIQGSGYPSRIDAL 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119 + ++VG+ TG LD +L + W A S TR G +T +G LV+ASG Sbjct: 59 HIDQGFDRDVGAQQVTGNPLDVSLVANNWLAVQTSDGKEAYTRGGELALTANGQLVTASG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS------VDMSQGFVRRE 173 + + + + +G G +S + + V + R Sbjct: 119 RAVLDTEGNPMSI--PPHQSLEIGNDGTVSIVPLGEGPQAMSAIGTLKVVTAPADQLTRR 176 Query: 174 NSGISPNIPPTPLEDLSGVT---VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 G+ NI P + T + G LE SN ++ + QMI L ++F +I Sbjct: 177 PDGLMRNISEDPTKAFPLATGTALHTGALEGSNVDAAGALVQMIQLQRQFEMQVKVIKNG 236 Query: 231 EKSMLEA 237 +++ A Sbjct: 237 DENAQSA 243 >gi|294013087|ref|YP_003546547.1| flagellar basal-body rod protein FlgF [Sphingobium japonicum UT26S] gi|292676417|dbj|BAI97935.1| flagellar basal-body rod protein FlgF [Sphingobium japonicum UT26S] Length = 246 Score = 133 bits (333), Expect = 3e-29, Method: Composition-based stats. Identities = 56/239 (23%), Positives = 91/239 (38%), Gaps = 6/239 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M N L A R + +++N++N +T GFR IK D + + Sbjct: 1 MDRLVNTALTAMRGAMARQAAISNNLANVNTTGFRAEIANAET--RWIKGDNLNTRAQAS 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119 G+ TG LD A+ GDA A+++P G TR G KV+D G L + G Sbjct: 59 EQVIAADMAQGAINETGNPLDVAMNGDAMLAVQAPDGGEAYTRRGDLKVSDSGLLTTGDG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176 + + + + I G + Q G + V+ + + G Sbjct: 119 LVVLGEGGPITLPQMDSVSIAKDGSIWGVPQGGDPANPQQVDKLKLVNPVGSSIAKGTDG 178 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 + L D TV G LE SN N+ + QMI ++ + + +ID ++ Sbjct: 179 LFREANGGVLPDDPIATVTGGSLEGSNVNATSALVQMIEASRAWETQIKMIDTAKQLDD 237 >gi|254496888|ref|ZP_05109736.1| flagellar basal body rod protein FlgF [Legionella drancourtii LLAP12] gi|254353907|gb|EET12594.1| flagellar basal body rod protein FlgF [Legionella drancourtii LLAP12] Length = 247 Score = 133 bits (333), Expect = 3e-29, Method: Composition-based stats. Identities = 51/245 (20%), Positives = 86/245 (35%), Gaps = 4/245 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M A R +A+N++N T GFRT + + SFV Sbjct: 1 MDPILYNAAGGGRANFSRQEIIANNLANAATPGFRTDLYQAQTMYAQAAGSNSSGNSFVV 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 G I+TG LD A+ G+ W A+ T+ G V +G LV+ASG Sbjct: 61 QNTNSFDLSGGDLITTGRNLDIAINGNGWLAVRDSTGKEAYTKTGSLHVDANGQLVTASG 120 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEIS---QKGKVIATMGLYSVDMSQGFVRRENSG 176 K + + + I Q +I G + + V + + + + G Sbjct: 121 KAVIGNGGPISIPPAQSIDIGTDGTISIVPLGDTAQSPAVVDRVKMVSLPKDNIVKNADG 180 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + S + + G LE SN + +M MI + F + L+ + + Sbjct: 181 LFQLKTGGVAPFDSNIRLISGALEGSNVQPVEQMVAMITAGRDFETHMNLMSTVSDNSQK 240 Query: 237 AIRNI 241 + + Sbjct: 241 LAQIL 245 >gi|255099438|ref|ZP_05328415.1| flagellar basal body rod protein FlgG [Clostridium difficile QCD-63q42] gi|255305296|ref|ZP_05349468.1| flagellar basal body rod protein FlgG [Clostridium difficile ATCC 43255] Length = 257 Score = 133 bits (333), Expect = 3e-29, Method: Composition-based stats. Identities = 41/259 (15%), Positives = 102/259 (39%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51 M ++A + +Q+ + V +N++N DT G+++ ++ F E+ N+ Sbjct: 1 MIRGLYTAVSAMITNQQKQNVVVNNLANMDTNGYKSKQLLTKSFDELKLEGYNNYANGTK 60 Query: 52 ----IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 I ++ + + G +T ++D A++G +F + TR+G F Sbjct: 61 QKQIIGDISPGISMDETITNFNQGPIKTTDNKMDVAIQGKGFFLVSDAAGNQFYTRNGNF 120 Query: 107 KVTDDGSLVSASGKYPVLDMA--SVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 + + G L+++ G Y + I ++ F V + IS G + + + Sbjct: 121 RTDNQGDLITSEGYYVLGTNTATGAVGHINVGNQKFEVAKDNTISLDGNAMYKFNIVDFN 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224 + ++ ++ + +E SN + + E+ M+ +++++ + Sbjct: 181 NYNNLKKEGDNLY----SGGGAMKVNNALTIQSAIESSNVDMVSEINNMMTISREYEANQ 236 Query: 225 TLIDENEKSMLEAIRNIAS 243 +I + + + I S Sbjct: 237 KIIQAMDSKLAKIASEIGS 255 >gi|157373206|ref|YP_001471806.1| flagellar basal-body rod protein FlgF [Shewanella sediminis HAW-EB3] gi|157315580|gb|ABV34678.1| flagellar basal-body rod protein FlgF [Shewanella sediminis HAW-EB3] Length = 244 Score = 133 bits (333), Expect = 3e-29, Method: Composition-based stats. Identities = 44/242 (18%), Positives = 96/242 (39%), Gaps = 3/242 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M A + + + A+N++N +T GF+ + + V + Q Sbjct: 1 MDKMLYTAAAGAARVMEAQAIRANNLANAETTGFKADLERVNATVIPAMGNTLQTRVMAQ 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + S + G+ TG LD A+ F++ + +G TR G +G ++ G+ Sbjct: 61 TQSSGFSHQSGALNPTGRTLDLAIREQGLFSVMTEQGEAYTRSGTLVPDTNG-QLTIDGR 119 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ-GFVRRENSGISP 179 + + ++ + + G ++ +G + +G + + + + G+ Sbjct: 120 PVAGIDGPIVLPEYRELFVGDDGRISVLAAEGGITEEVGQLKLVNPELDTMEKGLDGLFY 179 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + PL+ V V GFLE SN ++ E+ + L+++F L+ + + EA Sbjct: 180 SRDGQPLQANEQVKVDSGFLESSNVKAVSELIASMDLSRQFEVQVKLMKSA-EKLAEAGN 238 Query: 240 NI 241 + Sbjct: 239 RL 240 >gi|126697840|ref|YP_001086737.1| flagellar basal body rod protein FlgG [Clostridium difficile 630] gi|115249277|emb|CAJ67090.1| Flagellar hook-basal body complex protein FlgG1 [Clostridium difficile] Length = 257 Score = 133 bits (333), Expect = 3e-29, Method: Composition-based stats. Identities = 42/259 (16%), Positives = 103/259 (39%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51 M I ++A + +Q+ + V +N++N DT G+++ ++ F E+ N+ Sbjct: 1 MIRGLYIAVSAMITNQQKQNVVVNNLANMDTNGYKSKQLLTKSFDELKLEGYNNYANGTK 60 Query: 52 ----IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 I ++ + + G +T ++D A++G +F + TR+G F Sbjct: 61 QKQIIGDISPGISMDETITNFNQGPIKTTDNKMDVAIQGKGFFLVSDAAGNQFYTRNGNF 120 Query: 107 KVTDDGSLVSASGKYPVLDMA--SVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 + + G L+++ G Y + I ++ F V + IS G + + + Sbjct: 121 RTDNQGDLITSEGYYVLGTNTATGAVGHINVGNQKFEVAKDNTISLDGNAMYKFNIVDFN 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224 + ++ ++ + +E SN + + E+ M+ +++++ + Sbjct: 181 NYNNLKKEGDNLY----SGGGAMKVNNALTIQSAIESSNVDMVSEINNMMTISREYEANQ 236 Query: 225 TLIDENEKSMLEAIRNIAS 243 +I + + + I S Sbjct: 237 KIIQAMDSKLAKIASEIGS 255 >gi|255523696|ref|ZP_05390662.1| protein of unknown function DUF1078 domain protein [Clostridium carboxidivorans P7] gi|296186699|ref|ZP_06855101.1| flagellar hook-basal body protein [Clostridium carboxidivorans P7] gi|255512565|gb|EET88839.1| protein of unknown function DUF1078 domain protein [Clostridium carboxidivorans P7] gi|296048736|gb|EFG88168.1| flagellar hook-basal body protein [Clostridium carboxidivorans P7] Length = 338 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 46/335 (13%), Positives = 91/335 (27%), Gaps = 96/335 (28%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G++ +++L + +N++N+ T ++T + +F ++V Sbjct: 1 MLPSMFSGISGLKVNQRKLDVIGNNIANSSTTAYKTQRARFEDMVSQSMASATGASSKLG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF------------------ 90 + Q V S GS T LD A++GD +F Sbjct: 61 GTNPRQVGLGVQLAGIDTSTGQGSMQPTSAPLDVAIDGDGYFIVGTGAVPEDSGTVQITV 120 Query: 91 -------ALESPRGIILTRDGRFKVTDDGSLVSASGKYP--------------------- 122 TRDG F + G+L+++ G Sbjct: 121 TDDEKHTMSPDGVTTSFTRDGSFTLDTQGNLLTSDGLRVYGYANSKVSITYSKDPKVACT 180 Query: 123 ---------------------------VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI 155 L +I + + V+ Sbjct: 181 GTYDANAEGGADTEMNAEGLVPLVIPEYLTAGDKNHRIKSYSIGSDGTITATLDSGTAVL 240 Query: 156 ATMGLYSVDMSQGFVRRENSGIS-PNIPPTP----------LEDLSGVTVKRGFLEDSNA 204 + + S G + + P + ++G LE SN Sbjct: 241 GQIAMASFKNPAGLSKLGKNLYQISPNSGDPVVRSTSTSSDDNSAAYGDARQGMLEMSNV 300 Query: 205 NSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + E MI + F + +I ++ + + + Sbjct: 301 DLAEEFTNMIIANRAFQANGKIITTGDEILQDLVN 335 >gi|237751806|ref|ZP_04582286.1| flagellar distal rod protein FlgG [Helicobacter bilis ATCC 43879] gi|229373172|gb|EEO23563.1| flagellar distal rod protein FlgG [Helicobacter bilis ATCC 43879] Length = 285 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 60/283 (21%), Positives = 112/283 (39%), Gaps = 40/283 (14%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 MQT + + RL +++N++N +T GF+ V + + ++ D Sbjct: 1 MQTGYYGATGGMITQFNRLDVISNNLANLNTNGFKRDDVVIGDFLRMVQGHQDTLPIPDE 60 Query: 61 SG-----------------KEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTR 102 + +EY VG+ T LDFAL+ + +FA+++P GI TR Sbjct: 61 TKAAAKFINRTMTRVPTIAEEYTDFSVGAMEQTENTLDFALKAPNTFFAVQTPNGIAYTR 120 Query: 103 DGRFKVTDDGSLVSASGKYP-----------VLDMASVPIQIPQKDEIFNVGEKGEISQK 151 +G F ++DDG LV+ G + +L A++ I + + E Sbjct: 121 NGSFSISDDGYLVTQEGFHVLSRDGIDNEGGILMNANMQINVDTNGNVSFKELGNEGMAD 180 Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL----------SGVTVKRGFLED 201 ++ + + D + + S D + V +GFLE Sbjct: 181 NIAGGSLAIVTFDNPKFLKKIGGSLYIEERKEPDNTDSEGLAGANLVYNSGAVTQGFLEK 240 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDEN-EKSMLEAIRNIAS 243 SN N++ EM MI + + + ++ + ++ EAI +A+ Sbjct: 241 SNVNAVLEMTGMIETNRLVDMYSRVMKTHMDELNAEAINKLAA 283 >gi|254973935|ref|ZP_05270407.1| flagellar basal body rod protein FlgG [Clostridium difficile QCD-66c26] gi|255091321|ref|ZP_05320799.1| flagellar basal body rod protein FlgG [Clostridium difficile CIP 107932] gi|255312979|ref|ZP_05354562.1| flagellar basal body rod protein FlgG [Clostridium difficile QCD-76w55] gi|255515738|ref|ZP_05383414.1| flagellar basal body rod protein FlgG [Clostridium difficile QCD-97b34] gi|255648832|ref|ZP_05395734.1| flagellar basal body rod protein FlgG [Clostridium difficile QCD-37x79] gi|260682049|ref|YP_003213334.1| flagellar basal body rod protein FlgG [Clostridium difficile CD196] gi|260685647|ref|YP_003216780.1| flagellar basal body rod protein FlgG [Clostridium difficile R20291] gi|306518946|ref|ZP_07405293.1| flagellar basal body rod protein FlgG [Clostridium difficile QCD-32g58] gi|260208212|emb|CBA60569.1| flagellar basal-body rod protein FlgG [Clostridium difficile CD196] gi|260211663|emb|CBE01931.1| flagellar basal-body rod protein FlgG [Clostridium difficile R20291] Length = 257 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 41/259 (15%), Positives = 102/259 (39%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND------ 51 M ++A + +Q+ + V +N++N DT G+++ ++ F E+ N+ Sbjct: 1 MIRGLYTAVSAMITNQQKQNVVVNNLANMDTNGYKSKQLLTKSFDELKLEGYNNYANGTK 60 Query: 52 ----IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 I ++ + + G +T ++D A++G +F + TR+G F Sbjct: 61 QKQIIGDISPGISMDETITNFNQGPIKTTDNKMDVAIQGKGFFLVSDAAGNQFYTRNGNF 120 Query: 107 KVTDDGSLVSASGKYPVLDMA--SVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 + + G L+++ G Y + I ++ F V + IS G + + + Sbjct: 121 RTDNQGDLITSEGYYVLGTNTATGAVGHINVGNQKFEVAKDNTISLDGNAMYKFNIVDFN 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224 + ++ ++ + +E SN + + E+ M+ +++++ + Sbjct: 181 DYNNLKKEGDNLY----SGGGAMKVNNALTIQSAIESSNVDMVSEINNMMTISREYEANQ 236 Query: 225 TLIDENEKSMLEAIRNIAS 243 +I + + + I S Sbjct: 237 KIIQAMDSKLAKIASEIGS 255 >gi|150019058|ref|YP_001311312.1| flagellar basal body rod protein FlgG [Clostridium beijerinckii NCIMB 8052] gi|149905523|gb|ABR36356.1| protein of unknown function DUF1078 domain protein [Clostridium beijerinckii NCIMB 8052] Length = 255 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 47/256 (18%), Positives = 105/256 (41%), Gaps = 15/256 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M F + A +++L +++++ N T G+++ V F +++ + Sbjct: 1 MFNIFATAKSGMNAYQEKLDYLSNDLVNISTTGYKSTDVNFKDLLTESLDRRGTPLVEKK 60 Query: 56 ---ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDD 111 + V G Y + + G+ ++TG + D A++G +FAL I+ TRDG FK+ + Sbjct: 61 AITGTGVKLGVNYANNKQGNLLTTGGKTDLAIDGKGYFALSKEDGSIVYTRDGNFKIDSN 120 Query: 112 GSLVSASG---KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 G+LV ++G + AS ++++ + G + +A +G + + G Sbjct: 121 GALVDSNGTKVYVQYENGASEGNPALDREKMSIDKDGGISMEVDGQVAKIGTIPIFTAIG 180 Query: 169 FVR--RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 + + S +++G LE SN ++ ++ + F + Sbjct: 181 DKSFIPIGNSYFVPSSDAQVTLSSNYNIEQGMLEGSNVDAGETFSDIVLTQRAFQLSSKA 240 Query: 227 IDENEKSMLEAIRNIA 242 + + + I N+ Sbjct: 241 VTTADD-LWSMINNMR 255 >gi|327441421|dbj|BAK17786.1| flagellar basal body rod protein [Solibacillus silvestris StLB046] Length = 280 Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats. Identities = 51/279 (18%), Positives = 108/279 (38%), Gaps = 39/279 (13%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGA---------- 47 M F +A +++ + +NM+N +T GF++ + F +++ + Sbjct: 1 MFKGFYTVATGMVAQQRKTEILTNNMANANTPGFKSDQTTIRSFPDMLMSAVNSTNIPTE 60 Query: 48 ------IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFAL-------------EGDA 88 N + + V + ++ G STG D AL G Sbjct: 61 NGFAIKNLNPVGAVNAGVYLQETMPNQVQGQIYSTGLNTDIALINSSMPTDEASGNSGQI 120 Query: 89 WFALESPR-GIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGE 147 +F LE+ TR+G F + G+LV+ G + + A+ D I + Sbjct: 121 FFRLENESGTESYTRNGNFTLDGQGNLVNPQGLFVL--DANGERMQFDNDNIRISSDGAI 178 Query: 148 ISQKGKVIATMGLYSVDMSQGFVRRENSGISP----NIPPTPLEDLSGVTVKRGFLEDSN 203 + + T+G+ + V+R+N + ++P + ++++ +LE SN Sbjct: 179 FDENDVQVGTLGVAFSENPDVLVKRDNGLFNTLDGVDLPSAYGQANVQFSMQQQYLEGSN 238 Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 ++ M ++ + F + ++ +KSM +A+ I Sbjct: 239 VDASKAMTDLLTAYRAFEANQKVLQAYDKSMEKAVNEIG 277 >gi|92114097|ref|YP_574025.1| flagellar basal-body rod FlgF [Chromohalobacter salexigens DSM 3043] gi|91797187|gb|ABE59326.1| Flagellar basal-body rod FlgF [Chromohalobacter salexigens DSM 3043] Length = 253 Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats. Identities = 52/247 (21%), Positives = 93/247 (37%), Gaps = 12/247 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + Q+ S V N+SN T GFR V + + S VA Sbjct: 1 MDRIIYTAGSGASQAMQQQSVVNHNLSNVSTPGFRAELDAMRAVPVQGDGRLATRTS-VA 59 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119 + G +TG LD A++GDA+ A++ P+G TR G +V DG +++ G Sbjct: 60 ATTSGTDFSPGYMNATGRRLDVAMQGDAFLAIQDPQGGEAYTRRGDLQVDADG-MLTVKG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGE---ISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + + + + + + I G + ++ L V + R + G Sbjct: 119 EPVMGEQGPIVVPPDAEFSIGADGSISVLEAGANPDEIAPVGRLKLVTPDLQALTRGDDG 178 Query: 177 ISPNIPPT------PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 P P ++ G LE SN ++ M MI ++++ +I+ Sbjct: 179 WFRLPPGDDAEIAAPQPLDEDARLQSGVLEGSNVSATDAMVAMIDGARRYDMQMKVIESA 238 Query: 231 EKSMLEA 237 +++ A Sbjct: 239 DQNAQRA 245 >gi|288940410|ref|YP_003442650.1| flagellar basal-body rod protein FlgF [Allochromatium vinosum DSM 180] gi|288895782|gb|ADC61618.1| flagellar basal-body rod protein FlgF [Allochromatium vinosum DSM 180] Length = 246 Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats. Identities = 47/237 (19%), Positives = 89/237 (37%), Gaps = 6/237 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + ++ S N++N +T GFR ++ + +V Sbjct: 1 MDRFLYLAMSGAKETAYAQSINNHNLANANTTGFRQALAY--AYTAPVRGPVYDSRDYVQ 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119 G + L G+ ST +LD A++G+ + +++ G TR G ++ G L + G Sbjct: 59 VGNQVLDFCPGTLQSTERDLDVAIQGEGFLVVQTEDGGEAYTRAGNLQIDATGVLRNERG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176 + D + I + I G A + V+ + R G Sbjct: 119 LAVLGDGGPITIPEYESLSIGTDGTITIRPAGAAPNALAAVDRLRLVNPDTQNLLRGEDG 178 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 + P +GV V G LE SN N++ + +MI L++ F + +++ + Sbjct: 179 LIRAQDGEPAVADAGVRVISGMLETSNVNTVASLTRMIELSRAFETHIKMMETASSN 235 >gi|325921025|ref|ZP_08182907.1| flagellar basal-body rod protein FlgF, proteobacterial [Xanthomonas gardneri ATCC 19865] gi|325548507|gb|EGD19479.1| flagellar basal-body rod protein FlgF, proteobacterial [Xanthomonas gardneri ATCC 19865] Length = 251 Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats. Identities = 55/245 (22%), Positives = 95/245 (38%), Gaps = 10/245 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + A Q TV+ N++N DTVGF+ I+ Sbjct: 1 MDKALYVAMTGARASLQAQGTVSHNLANVDTVGFKAALANTEAF--KIQGKGYPSRIDAL 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + G TG LD +L+ D W +++SP TR+G +T +G LV+A+G Sbjct: 59 HVDQGFDRSQGHQQVTGNPLDVSLQQDRWLSVQSPDGSEAYTRNGELALTANGQLVTANG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG----LYSVDMSQGFVRRENS 175 + + + P + I +G+ TM + VD + R Sbjct: 119 HAVLDEGGAPMTIPPHQAMEIGSDGSISIIPQGEGPQTMAIVGKMKVVDAPADRLTRRPD 178 Query: 176 GISPNIPPTPLEDLSGVT---VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 G+ N P + T + G LE SN ++ + +MI L ++F +I + Sbjct: 179 GLMRNTSTDPAQAFQIATGKTINSGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNGDD 238 Query: 233 SMLEA 237 + A Sbjct: 239 NAQSA 243 >gi|222053611|ref|YP_002535973.1| protein of unknown function DUF1078 domain protein [Geobacter sp. FRC-32] gi|221562900|gb|ACM18872.1| protein of unknown function DUF1078 domain protein [Geobacter sp. FRC-32] Length = 293 Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 48/286 (16%), Positives = 97/286 (33%), Gaps = 49/286 (17%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 ++ G++ L + ++ + +N+SN +TVGF+ ++ FS+++ + Q + Sbjct: 5 SAMFTGVSGLLNNGEAMNVIGNNISNVNTVGFKGARMLFSDMLSQNIGNNSQIGRGMQIQ 64 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII---------LTRDGRFKVTDDGS 113 K GSF ST D ++G+++FAL+ P + L+R G F V D Sbjct: 65 KVENLFGQGSFESTENVTDLGIQGNSFFALKPPTTVAPVAAQNAAFLSRAGAFHVDKDLY 124 Query: 114 LVSASGKYPVLDMASVPIQ---------------IPQKDEIFNVGEKGEISQKGKVIATM 158 LV+ G + + I + + G + Sbjct: 125 LVNPDGYQVLDTAGQPIRFYTGGTADQNFSKVVKVEPNGLITYLAQDGITNLYYSTTGVA 184 Query: 159 GLYSVDMSQ---------------GFVRRENSGISPNIPPT----------PLEDLSGVT 193 GL + + G + S + + Sbjct: 185 GLPTTTANAAAVQRLAVVSATDLSGLEKAGGSLYKATATSGVSAAGFTLAGNQPNGTSEK 244 Query: 194 VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 V LE SN + + +MI + +++ + I ++ E + Sbjct: 245 VLSNSLEQSNVDLASQFVKMIITQRAYSANSKTITTADEMTQEVLN 290 >gi|302878277|ref|YP_003846841.1| flagellar basal-body rod protein FlgF [Gallionella capsiferriformans ES-2] gi|302581066|gb|ADL55077.1| flagellar basal-body rod protein FlgF [Gallionella capsiferriformans ES-2] Length = 247 Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 51/241 (21%), Positives = 94/241 (39%), Gaps = 6/241 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + Q+ + V++N++NT+T GFR F V + + +FV Sbjct: 1 MDKLIYTAMTGASHVLQQQAAVSENLANTNTPGFRATLNTFRAV--PLVGEGLPTRAFVV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 +F TG LD A+ G W A++ P TR+G F+++ G L + +G Sbjct: 59 DSTAGFDFTPAAFQPTGRSLDVAVNGTGWLAVQGPDGKEAYTRNGSFQISSSGVLQTRNG 118 Query: 120 KYP---VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + P + + E +Q V+ L V+ + R G Sbjct: 119 LNVLSDSGPITIPPGTQLTFAKDGTISTVPEGNQATSVVVVGRLKLVNPDVAKLERSGDG 178 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + + + + G LE SN +++ M MI L +KF+ ++ + + + Sbjct: 179 MFRMKDGSTAPADAKTEIAPGNLEGSNVSTVEMMVNMISLARKFDMQMKMLQTADNNAKQ 238 Query: 237 A 237 A Sbjct: 239 A 239 >gi|224372658|ref|YP_002607030.1| flagellar basal-body rod protein [Nautilia profundicola AmH] gi|223589304|gb|ACM93040.1| flagellar basal-body rod protein [Nautilia profundicola AmH] Length = 261 Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 56/261 (21%), Positives = 105/261 (40%), Gaps = 23/261 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDID---- 53 M + A + RL+ +++N++N +T GF+ + F + ++++ Sbjct: 1 MINGYYDATGAMVTQFNRLNVISNNLANVNTAGFKQDDIIIGDFERLFSEKRDNLPLENN 60 Query: 54 ----------QKISFVASGKEYLSKEVGSFISTGTELDFAL-EGDAWFALESPRGIILTR 102 +EY + ++G T LD AL E + +FA+ +P G LTR Sbjct: 61 TKEAAKFINRNLNKVPIVVEEYTNYDIGDLQKTSNPLDIALKEKNQFFAINTPNGEKLTR 120 Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162 G F + +G LV+ G + + + + + G I Q + +AT + Sbjct: 121 AGNFNLDANGYLVTKDGYQVLDEQNNPIQ--LAPSYPVTIDKNGNIYQNNEKVATFKIVK 178 Query: 163 VDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222 +D ++ + IP T D T+ +GFLE SN N + EM +I + Sbjct: 179 IDNLNTL-KKVGDNMFDFIPDTATIDTKNSTL-QGFLEKSNVNPIREMTDLIETNRLVEQ 236 Query: 223 ITTLIDE-NEKSMLEAIRNIA 242 ++ + +AI +A Sbjct: 237 YQKVMTTFMDDLNRDAIEKLA 257 >gi|255322393|ref|ZP_05363539.1| flagellar basal-body rod protein [Campylobacter showae RM3277] gi|255300766|gb|EET80037.1| flagellar basal-body rod protein [Campylobacter showae RM3277] Length = 270 Score = 132 bits (331), Expect = 5e-29, Method: Composition-based stats. Identities = 45/266 (16%), Positives = 100/266 (37%), Gaps = 24/266 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDID---- 53 M + A + RL +A+N++N +T+GF+ V F + ++++ Sbjct: 1 MNNGYYQATGAMVTQFNRLDVIANNLANINTIGFKRDDVVVGDFERIFKEYRDELPIENH 60 Query: 54 ----------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDA--WFALESPRGIILT 101 ++Y+ G + +LDFA++ + + P + LT Sbjct: 61 TKDAAKFLNRTIDRVPQISEQYVDFSQGGLKFSNNDLDFAMKREDLFFLVEVKPGDVRLT 120 Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMA---SVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158 ++G F + +DG LV+ G + + + E F+ + G + + +A + Sbjct: 121 KNGSFNLDEDGFLVTKEGYKVLPSDYFTNNFQGIQIPQGERFSADKNGNLYSNEEPLARL 180 Query: 159 GLYSVDMSQGFVRRENSGIS-PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217 + + + ++ PN+ V + + SN N++ EM +I Sbjct: 181 YIAQPKEIRNLTKEGDNLYVLPNLKELEDVGGEIDAVAWKYTQISNVNAVTEMVGLIETQ 240 Query: 218 QKFNSITTLIDEN-EKSMLEAIRNIA 242 + ++ + + EAI +A Sbjct: 241 RFVEMYQKVMTSHMDDLNQEAISKLA 266 >gi|167626156|ref|YP_001676450.1| flagellar basal-body rod protein FlgF [Shewanella halifaxensis HAW-EB4] gi|167356178|gb|ABZ78791.1| flagellar basal-body rod protein FlgF [Shewanella halifaxensis HAW-EB4] Length = 244 Score = 132 bits (331), Expect = 5e-29, Method: Composition-based stats. Identities = 47/242 (19%), Positives = 95/242 (39%), Gaps = 3/242 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + A+N++N DT GF+ + + +V + Q Sbjct: 1 MDRMIYTAAKGAARVMEAQAIRANNLANADTTGFKADLERVNAMVVTPTGNSLQTRVLAQ 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + S++ G+ TG LD A+ FA+ + G TR G +G ++ G+ Sbjct: 61 TQSNGFSQQTGAMNPTGRALDLAINDSGLFAVMTAEGEGYTRSGAITPDANG-QLTLDGR 119 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ-GFVRRENSGISP 179 + + ++ + + G I+ +G +I +G + + + G+ Sbjct: 120 PVAGLDGPIVLPEYRELFVGDDGRLSIIADEGGIIEEVGQLKLVNPDISAMSKGLDGLLY 179 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 PL V+V GFLE SN ++ E+ + L+++F L+ + + EA Sbjct: 180 PADRQPLPASEQVSVSSGFLEASNVQAVGELIAAMDLSRQFEVQVKLMKSA-EKLAEAGN 238 Query: 240 NI 241 + Sbjct: 239 RL 240 >gi|323341367|ref|ZP_08081611.1| flagellar basal-body rod protein FlgG [Lactobacillus ruminis ATCC 25644] gi|323091244|gb|EFZ33872.1| flagellar basal-body rod protein FlgG [Lactobacillus ruminis ATCC 25644] Length = 256 Score = 132 bits (331), Expect = 5e-29, Method: Composition-based stats. Identities = 47/250 (18%), Positives = 101/250 (40%), Gaps = 14/250 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50 M +I + A + + V++N++N DT+G++ + F E++ N Sbjct: 3 MSQILSISRSGLNAYQHEMDVVSNNLANVDTLGYKDKRTTFQELLNNGTNANEVGLSQNA 62 Query: 51 DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVT 109 + + + + G+F ST D A++G+ +F + + TRDG F+ Sbjct: 63 GNVAINAGLNVQQVNENLSQGAFKSTAGTYDLAIDGEGYFGVRDGANNLYLTRDGSFRRD 122 Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169 DG+LV++ G + ++VP KD ++ G +S + + L+ S Sbjct: 123 ADGNLVTSKGMKVEV-QSNVPSSQWPKDGEVSISTSGYVSIGNVRVGRILLFRPQNSIDM 181 Query: 170 VRRENSGISP--NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 N+ N+ + + + +G +E SN + M +MI + + + + Sbjct: 182 NDIGNNLYRCDGNLISSANNNAGFGQINQGLVELSNVDVADTMSKMIITQRAYQMNSKAL 241 Query: 228 DENEKSMLEA 237 ++ + Sbjct: 242 QSTDEMLQTI 251 >gi|152997581|ref|YP_001342416.1| flagellar basal-body rod protein FlgF [Marinomonas sp. MWYL1] gi|150838505|gb|ABR72481.1| flagellar basal-body rod protein FlgF [Marinomonas sp. MWYL1] Length = 247 Score = 132 bits (331), Expect = 5e-29, Method: Composition-based stats. Identities = 50/245 (20%), Positives = 96/245 (39%), Gaps = 6/245 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + ++ + + A+N++N T GFR+ + + + D + Sbjct: 1 MDKALYLAMSGGVQTMNAQTIHANNLANVSTTGFRSDFEQARSM--QVYGDYHPSRVYAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G I TG LD A+ GD + A+ TR G F++ G LV+ G Sbjct: 59 TENPATRYTQGDMIQTGRNLDVAVAGDGFIAVYDESGQEAYTRAGDFQINAAGQLVTGRG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG---KVIATMGLYSVDMSQGFVRRENSG 176 + + I G + Q G +V + V+ + +R+E G Sbjct: 119 LPVAGVGGPIFLPPADSINITADGSISIVPQGGANNEVAVLNQIKLVNPDKQNLRKEEDG 178 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + L+ V + GF+E SN N++ EM +++L ++F ++D + Sbjct: 179 LIHTRDGQALDADPNVQLVSGFIEGSNVNAVEEMTHIMNLARRFEMNVKMMDTIRDNADS 238 Query: 237 AIRNI 241 + R + Sbjct: 239 SARIL 243 >gi|322383079|ref|ZP_08056906.1| flagellar hook-basal body-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321152741|gb|EFX45367.1| flagellar hook-basal body-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 271 Score = 132 bits (331), Expect = 5e-29, Method: Composition-based stats. Identities = 44/272 (16%), Positives = 104/272 (38%), Gaps = 35/272 (12%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID---------- 53 N ++ L+Q+L +A+N++N +TVG++ F E++ ++KN + Sbjct: 1 MINASVS-MNGLQQKLDILANNIANINTVGYKRKDASFQEILKSVKNQPEKFQLPGRMTP 59 Query: 54 ---QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT- 109 Q + G +T LD ++GD F + T+ G F+++ Sbjct: 60 SGLQLGWGARLSQISSDFTQGPVENTQNSLDLMVQGDGMFEILVDGKPYWTKSGSFQLSV 119 Query: 110 ---DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ-----KGKVIATMGLY 161 + G ++ + V + PI +P + + ++ + + + + Sbjct: 120 MPGNQGLALTTKDGHYVSGLNGEPIILPPNTQPKIDEQGNVVAYSETGARPVQVGRIRVV 179 Query: 162 SVDMSQGFVRRENSGIS-----------PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEM 210 ++ Q + + + +++ + V +G+LE SN N EM Sbjct: 180 QIERPQLLEAVGENLYTLKAGIEKGQALRDAAGLTVQEQGKLKVMQGYLEQSNVNLSDEM 239 Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 ++I++ + F + + ++ M N+ Sbjct: 240 TELINVQRAFQLSSRAVTSSDSMMG-LANNLR 270 >gi|325274798|ref|ZP_08140826.1| flagellar basal body rod protein FlgF [Pseudomonas sp. TJI-51] gi|324100066|gb|EGB97884.1| flagellar basal body rod protein FlgF [Pseudomonas sp. TJI-51] Length = 246 Score = 132 bits (331), Expect = 5e-29, Method: Composition-based stats. Identities = 47/246 (19%), Positives = 98/246 (39%), Gaps = 9/246 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A+N++N T GF+ + + + D +F Sbjct: 1 MDKLLYVAMTGASQNALAQKAHANNLANVSTNGFQRDLEQARSM--PVFGDSFPARAFAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + G + TG +LD A+ G+ + A+++P R G + G L + +G Sbjct: 59 TERPATDFTQGPLVETGRDLDVAVTGNGFIAVQAPDGSEAYVRTGSLNIDALGVLRAGNG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQ--KGKVIATMGLYSVDMSQ-GFVRRENSG 176 + + + + QK E+ G S +VIA + + +++ G Sbjct: 119 MPVIGNGGPIAVPPEQKVEVGADGTLSIRSMGEDPRVIAEVDRIKLVNPDIKGLKKGLDG 178 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN---EKS 233 + P + V V GFLE SN N++ EM ++ L+++F +++ +++ Sbjct: 179 LIHTTSGQPADADVNVRVVSGFLEGSNVNAVEEMTSVLALSRQFELHVKMMNTAKEGDEA 238 Query: 234 MLEAIR 239 M ++ Sbjct: 239 MARVLQ 244 >gi|126176155|ref|YP_001052304.1| flagellar basal-body rod protein FlgF [Shewanella baltica OS155] gi|125999360|gb|ABN63435.1| flagellar basal-body rod protein FlgF [Shewanella baltica OS155] Length = 244 Score = 132 bits (331), Expect = 5e-29, Method: Composition-based stats. Identities = 42/242 (17%), Positives = 93/242 (38%), Gaps = 3/242 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M+ + + + + S A+N++N +T GF+ + + V + + Sbjct: 1 MEKMLYTAASGAVRILEAQSIRANNLANAETAGFKADLERVNAVPLVAQGNSLNTRVMAQ 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + S++ G TG LD A+ F++ TR G + +G ++ G+ Sbjct: 61 TESSGFSQQSGVINPTGRSLDLAIRDRGLFSVAVDGAEAYTRSGAIETNAEG-QLTIDGR 119 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ-GFVRRENSGISP 179 + + + + + G + +G +I +G + +++ G+ Sbjct: 120 PVLGIDGPIALPEYKDVFVGEDGTVSVLPAEGGIIEEVGRLKLVNPDFALMQKGQDGLLY 179 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + GV V GFLE SN ++ E+ + L+++F L+ + + EA Sbjct: 180 RRDGQAVPQDEGVLVDSGFLESSNVQAVSELIASMDLSRQFEIQVKLMKSA-EKLAEAGN 238 Query: 240 NI 241 + Sbjct: 239 RL 240 >gi|225569971|ref|ZP_03778996.1| hypothetical protein CLOHYLEM_06066 [Clostridium hylemonae DSM 15053] gi|225161441|gb|EEG74060.1| hypothetical protein CLOHYLEM_06066 [Clostridium hylemonae DSM 15053] Length = 294 Score = 132 bits (331), Expect = 5e-29, Method: Composition-based stats. Identities = 45/291 (15%), Positives = 96/291 (32%), Gaps = 52/291 (17%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S +A + + ++ +++N++N +T G+++ F + + Sbjct: 1 MVKSMYAAIAGLRSHQSKMDVISNNIANVNTWGYKSRSANFQDAMYQNVINSTAGNVNAG 60 Query: 49 ---KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES----------- 94 + Q V G + GS+ TG L+ + G+ +F + Sbjct: 61 GTGGQNSSQLGYGVNVGSITTNFTTGSWGFTGDPLNCMINGNGFFIVGPMIADPTDGIAS 120 Query: 95 ----PRGIILTRDGRFKVTDDGSLVSASGKYPVL---------------------DMASV 129 G+ L+R G F V ++G L+ Y D Sbjct: 121 NNFATSGLSLSRVGIFSVDNNGYLIDDGRNYVYGFTQNADGTWDTDVLRPLQIPNDATGE 180 Query: 130 PIQIPQKDEIFNVGEKGEISQKGKV-IATMGLYSVDMSQGFVRRENSGISPNIPPTPLED 188 +I + G K ++ I + L +V+ G + S + Sbjct: 181 QYKIQTYKIGTDGTITGITFDKEQITIGKLALAAVENPNGLEQSAGYLYSAGPNAGQITA 240 Query: 189 LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + G +LE SN +M MI + + + + +I ++ + + + Sbjct: 241 VEGDYFLSNYLEMSNVELASDMASMITTQRGYQANSKIITVTDEMLEQLVN 291 >gi|206890142|ref|YP_002249849.1| flagellar hook basal-body protein FlgG [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742080|gb|ACI21137.1| flagellar hook basal-body protein FlgG [Thermodesulfovibrio yellowstonii DSM 11347] Length = 239 Score = 132 bits (331), Expect = 5e-29, Method: Composition-based stats. Identities = 48/250 (19%), Positives = 97/250 (38%), Gaps = 21/250 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M I + E LS +++N++N +T G++ F+ + + + + + + Sbjct: 1 MYKGIYITMTGMSMRENELSAISNNLANINTTGYKKQ--SFASRLYPLLSGKPSQSNVIY 58 Query: 61 SG--------KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDG 112 +Y+ G+ T D ++G+ +F + I+ TR+G F D Sbjct: 59 QDARAQTYFGTQYIDTSQGALKQTHNPFDLGIQGEGFFVVRQGNKILYTREGSFTRDKDN 118 Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172 LV+ +G + + + I G+ G I G I + L ++ + + Sbjct: 119 YLVTQTGLRVLDENNNP---IIIDGTKIEYGKDGTILVDGNPIGRIKLVKLNNLRHVGQS 175 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 G+ + + +G++E+SN N M EM QMI + F+ + + Sbjct: 176 LYEGVEAGQ--------ANGQILQGWIENSNVNPMSEMVQMIQAIRNFDFTQRVTTNFSE 227 Query: 233 SMLEAIRNIA 242 A+ IA Sbjct: 228 LAQRAVSEIA 237 >gi|239628978|ref|ZP_04672009.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239519124|gb|EEQ58990.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 246 Score = 131 bits (330), Expect = 6e-29, Method: Composition-based stats. Identities = 46/249 (18%), Positives = 87/249 (34%), Gaps = 12/249 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIK---VKFSEVVGAIKND----ID 53 M + F + L ++ L A+N++N T G++ + F+E + N + Sbjct: 1 MFSGFYTAASGMLMNQRSLDMAANNIANVKTSGYKPKRLVKTTFNEQLVRQMNGQTQGLG 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113 Q + +E + + TG D A+ GD +F ++ G LTR+G FK ++G+ Sbjct: 61 QGSTISIGTREMTTHGQAPVVDTGQTYDLAINGDGFFVIQGTDGQYLTRNGHFKRDEEGN 120 Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRE 173 L+ + D V + + + I + D Sbjct: 121 LILPGVGQVMGDGGPVYVDESGFRVGADGIIYDNEDGELDQIQIVEPDDYDN-----LTF 175 Query: 174 NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 + TV +G LE S N EM + + + + F S + ++ Sbjct: 176 YDNGTYGAGGGVTLTQVYPTVYQGKLEQSGVNLNNEMTRAMEVQRAFQSCGKALTIIDQM 235 Query: 234 MLEAIRNIA 242 + I Sbjct: 236 NQKTANEIG 244 >gi|187778756|ref|ZP_02995229.1| hypothetical protein CLOSPO_02351 [Clostridium sporogenes ATCC 15579] gi|187772381|gb|EDU36183.1| hypothetical protein CLOSPO_02351 [Clostridium sporogenes ATCC 15579] Length = 350 Score = 131 bits (330), Expect = 6e-29, Method: Composition-based stats. Identities = 43/331 (12%), Positives = 93/331 (28%), Gaps = 92/331 (27%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50 M S G++ A + RL V +N++N +T F++ ++F +++ + Sbjct: 17 MLRSMYSGISGLKAQQTRLDIVGNNIANANTTAFKSQSIRFQDMLSQNMSSATGPSANLG 76 Query: 51 --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP------------- 95 + Q V + G+ +TG LD A++G +F + Sbjct: 77 GTNPRQVGLGVQVAGIFTKFTTGNMQTTGRNLDMAIDGPGFFIVGKGKFSDTTTISTSGD 136 Query: 96 ---------RGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQ----------- 135 + T+DG F + +DGSL+++ G + Sbjct: 137 DEGAINGGTMEVSFTKDGSFNLDEDGSLITSDGLRIMGYAIDSAAITKDATTGKIKVGFK 196 Query: 136 ----------------------------------KDEIFNVGEKGEISQKGKVIATMGLY 161 + + + + + + Sbjct: 197 NADEDPKADATKLVPLAIPDEIEKGSEKVRVQSFTIDKDGLIVASLVDGTSAALGQIAMA 256 Query: 162 SVDMSQGFVRRENSGI-------------SPNIPPTPLEDLSGVTVKRGFLEDSNANSMY 208 S G + + + G +E SN + Sbjct: 257 SFKNEGGLEKMGKNLYRNSANSGEAIIRSGRGTDADKDNSKGYGDMLNGMIEMSNVDLAE 316 Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E +MI + F + +I ++ + E + Sbjct: 317 EFTEMIVANRAFQACGKMITTGDEILQELVN 347 >gi|295097202|emb|CBK86292.1| fagellar hook-basal body proteins [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 245 Score = 131 bits (330), Expect = 6e-29, Method: Composition-based stats. Identities = 54/246 (21%), Positives = 93/246 (37%), Gaps = 10/246 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + L+A A R + ++NM+N+ T GFR F V ++ + + VA Sbjct: 1 MDRAIYTALSAANAALNRQAVTSNNMANSATAGFRAQLAAFRAV--PVEGQTLKTRALVA 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 Y +G TG LD AL + W A+ P TR+G ++ DG+L G Sbjct: 59 ESTPYNDDTMGPITHTGRSLDVALPQNGWLAVALPDGSEGYTRNGGIEIDRDGAL--QVG 116 Query: 120 KYPVLDMASV----PIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 P++ + P E V G + V+ L V+ + + Sbjct: 117 GKPLMGDGAPLVVPPHSQITIAEDGTVSALGAGDEPTAVVPVGRLKMVNAPMSTLIHGDD 176 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 G+ L + + LE SN + + M +MI + F +I +++ Sbjct: 177 GLFRPAAGNALPQDDAMRLSPESLEGSNVSPVKAMTEMIATARSFEMNMKVIRTADENAQ 236 Query: 236 EAIRNI 241 +A + Sbjct: 237 KA-NQL 241 >gi|254780378|ref|YP_003064791.1| flagellar basal body rod protein FlgG [Candidatus Liberibacter asiaticus str. psy62] gi|254040055|gb|ACT56851.1| flagellar basal body rod protein FlgG [Candidatus Liberibacter asiaticus str. psy62] Length = 262 Score = 131 bits (330), Expect = 6e-29, Method: Composition-based stats. Identities = 54/264 (20%), Positives = 106/264 (40%), Gaps = 25/264 (9%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55 +F I A A + L +A+N++N +T G++ + +F++ + + Sbjct: 1 MKAFMIAAAGMSAQQTNLEIIANNIANINTTGYKRARAEFADFLYQAEKVAGSPSQSADK 60 Query: 56 ---------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGR 105 S V G + TG LD AL G WF +E+P + TR G Sbjct: 61 AVVPEGISIGSGVQISSVRNVYTQGEVVHTGNNLDLALVGRGWFQVETPDKTVMYTRAGS 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVP--IQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 F + G LV+A G V + +I + G+ S + + + + + Sbjct: 121 FNIDSKGQLVTADGNTLVPGIVIPEETREIKVSRSGQILAVTGKNSDF-QPVGQLLIANF 179 Query: 164 DMSQGFVRRENSGISPN-IPPTP----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 G ++ ++ + P +D+ VK+G+LE SN +++ E+ +MI + Sbjct: 180 INEAGLRNIGDNLLARTSVSGDPIISNPDDIGFAHVKQGYLEASNVDAVKEISEMISAQR 239 Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242 + + +I+ ++ M I + Sbjct: 240 AYEMNSKVIEAADE-MSSLITKMR 262 >gi|148358807|ref|YP_001250014.1| flagellar basal body rod protein FlgF [Legionella pneumophila str. Corby] gi|296106852|ref|YP_003618552.1| flagellar basal-body rod protein FlgF [Legionella pneumophila 2300/99 Alcoy] gi|148280580|gb|ABQ54668.1| flagellar basal body rod protein FlgF [Legionella pneumophila str. Corby] gi|295648753|gb|ADG24600.1| flagellar basal-body rod protein FlgF [Legionella pneumophila 2300/99 Alcoy] Length = 248 Score = 131 bits (330), Expect = 6e-29, Method: Composition-based stats. Identities = 53/247 (21%), Positives = 110/247 (44%), Gaps = 7/247 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI--SF 58 M+ ++ + +R +A+N++N +T GF+ + + N +Q SF Sbjct: 1 MEPILYNSISGSRSDFKRQEIIANNLANINTPGFKADLYQAQTMYMNNANGKNQFSAHSF 60 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSA 117 + + G I+TG +LD A++GD W A++ + TR G ++ +G L++A Sbjct: 61 ITQNANGIDTSPGEIITTGRDLDVAIDGDGWMAVQDSQGREAYTRGGSLRLNPNGQLITA 120 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV---IATMGLYSVDMSQGFVRREN 174 SGK + D + I Q EI + G + +G V + V + + + + + Sbjct: 121 SGKVVLGDGGPISIPPAQSIEIGSDGTISIVPLEGDVKSLAILDRIKLVTLDRNNIYKND 180 Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 G+ + + ++ G LE SN N++ +M MI ++F++ L+ + + Sbjct: 181 EGLIQLKSGAATANSNI-KLQSGALEGSNVNAIDQMVAMISAGREFDAQMKLLSTVDDNG 239 Query: 235 LEAIRNI 241 + + + Sbjct: 240 QKLAQLL 246 >gi|138896904|ref|YP_001127357.1| flagellar hook-basal body protein [Geobacillus thermodenitrificans NG80-2] gi|134268417|gb|ABO68612.1| Flagellar hook-basal body protein [Geobacillus thermodenitrificans NG80-2] Length = 273 Score = 131 bits (330), Expect = 7e-29, Method: Composition-based stats. Identities = 60/273 (21%), Positives = 105/273 (38%), Gaps = 31/273 (11%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S + AL+QRL T++ N+ N++T GF+ + F+E++ + + Sbjct: 1 MLRSMHTAANTMNALQQRLDTLSHNIVNSNTTGFKRREASFAELLTQQVDRLPDDEAPRQ 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALE-GDAWFALESPR-----GIILTR 102 + + L G TG LDFA + WF + I TR Sbjct: 61 TPAGVRYGNGAGLASTMLVTAQGPLTETGRALDFAFTAANQWFRVRVTDGNGVATIGYTR 120 Query: 103 DGRFKVTDDGSLVS--ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 G F +T G ++ S PVLD + PI++P F + G ++ A + Sbjct: 121 AGNFSLTPIGDRLALVTSDGRPVLDETNAPIELPAHATGFQLSPTGTLTATDANGAVVAR 180 Query: 161 YSVD-----MSQGFVRRENS-GISPNIPPTPLEDLSGVT----VKRGFLEDSNANSMYEM 210 ++ Q ++ P P E + +K+G LE SN + E+ Sbjct: 181 VNLGVTVIRRPQLLEALGDNVFTLPTAPGATQELNGNLRSQIAMKQGALEQSNVDLGEEL 240 Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 ++ T+ + I +E+ + I N+ S Sbjct: 241 IGLMATTRAYQLNARAISISEQMLG-LINNLRS 272 >gi|154175436|ref|YP_001408075.1| flagella basal body rod protein [Campylobacter curvus 525.92] gi|112802880|gb|EAU00224.1| flagella basal body rod protein [Campylobacter curvus 525.92] Length = 273 Score = 131 bits (330), Expect = 7e-29, Method: Composition-based stats. Identities = 45/270 (16%), Positives = 107/270 (39%), Gaps = 28/270 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDID---- 53 MQ + A + RL+ +++N++N +T+GF+ V F + ++++ Sbjct: 1 MQNGYYQATAGMVTQFSRLNVISNNLANVNTIGFKRNDVVIGDFERIFKETQDELPLKNH 60 Query: 54 ----------QKISFVASGKEYLSKEVGSFISTGTELDFALEG-DAWFALESPRGIILTR 102 +EY G F + LDFA++ D +F +++P G+ LT+ Sbjct: 61 TKDAAKFLNRTLDRVPQVSEEYTDFSAGGFKYSSNTLDFAIKREDMFFLVDTPNGVRLTK 120 Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF---------NVGEKGEISQKGK 153 +G F + +DG +V+ G + + + ++ N + + Sbjct: 121 NGSFNLDEDGFIVTKEGYRVLPNNYQTLAPEQRGIQVPLDRSLSVDKNGNIYTMNEGESE 180 Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQM 213 I+ + + + ++ P ++ T+ +G+++ SN N + EM + Sbjct: 181 QISKFFIAQPREIRELKKIGDNLFEPKNLDDVIDIDDADTLMQGYVQMSNVNPVTEMVGL 240 Query: 214 IHLTQKFNSITTLIDENE-KSMLEAIRNIA 242 I + + ++ + +A++ +A Sbjct: 241 IETQRLVDMYQKVMTSHMTDLNQDAVQKLA 270 >gi|153953798|ref|YP_001394563.1| flagellar basal body rod protein FlgG [Clostridium kluyveri DSM 555] gi|219854414|ref|YP_002471536.1| hypothetical protein CKR_1071 [Clostridium kluyveri NBRC 12016] gi|146346679|gb|EDK33215.1| FlgG2 [Clostridium kluyveri DSM 555] gi|219568138|dbj|BAH06122.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 261 Score = 131 bits (330), Expect = 7e-29, Method: Composition-based stats. Identities = 46/260 (17%), Positives = 95/260 (36%), Gaps = 20/260 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + +A A +++L+++++NM+N +TVG++ V F ++V + Sbjct: 1 MLRAIWNSASAMNAEQEKLNSISNNMANAETVGYKREVVNFQDLVYETLDRNGYPVNDEG 60 Query: 56 -----ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVT 109 + V + GS TG + + A++G+ +F + G R G F V Sbjct: 61 QNTINGTGVRTTNWLRDTLQGSLQETGLKANMAIDGEGFFRVTLQNGTQGYERAGNFNVN 120 Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT------MGLYSV 163 G LV G +++ + + + N + + G +V Sbjct: 121 SMGELVDPDGNRLEVNLTEEGVNLINSGVLLNNDNFTVDKKGQIYVNVDDNSVLYGKINV 180 Query: 164 DMSQGFVRR--ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221 + G + + + + +G+LE SN + E+ MI + F Sbjct: 181 YNAVGQDSMLSIGDNLYLPAENVQVTENQDANILQGYLEQSNVDLGREITDMILAQRAFA 240 Query: 222 SITTLIDENEKSMLEAIRNI 241 + ++ M I N+ Sbjct: 241 LGAKGLTTADE-MWGLINNM 259 >gi|182418329|ref|ZP_02949624.1| flagellar hook protein FlgE [Clostridium butyricum 5521] gi|237666973|ref|ZP_04526958.1| flagellar basal body rod protein [Clostridium butyricum E4 str. BoNT E BL5262] gi|182377711|gb|EDT75255.1| flagellar hook protein FlgE [Clostridium butyricum 5521] gi|237658172|gb|EEP55727.1| flagellar basal body rod protein [Clostridium butyricum E4 str. BoNT E BL5262] Length = 255 Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats. Identities = 52/257 (20%), Positives = 112/257 (43%), Gaps = 17/257 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M F G + A ++++ +++++ N+ T G++ + F +++ + Sbjct: 1 MFNVFATGKSGMTAYQEKMDYLSNDLVNSTTTGYKGTDIGFKDLMTESLDRKGNPIVNKN 60 Query: 56 ---ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDD 111 + V G Y + + G+ ++TG + D A++G +FAL+ P I TRDG FK+ + Sbjct: 61 AVNGTGVRIGTNYANNKQGNLLNTGLKTDLAIDGKGYFALQDPDGTISYTRDGNFKIDSN 120 Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV------IATMGLYSVDM 165 GSLV+ASG + + + N+ G+ + + ++ +++ Sbjct: 121 GSLVTASGVKVYVQYEPGFSEGDPAFDSDNIAIDGQGGISMNIDGNVALVGSIPVFTAIG 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225 +GFV + N+ P+ +++GFLE SN ++ +I + F + Sbjct: 181 DKGFVPKGNNMFVPSDDAQITLSDDYD-IRQGFLEASNVDAAEVFSDVILTQRAFQLSSK 239 Query: 226 LIDENEKSMLEAIRNIA 242 I + + I ++ Sbjct: 240 AITTADD-IWSMINSMR 255 >gi|212637786|ref|YP_002314311.1| flagellar basal body rod protein [Shewanella piezotolerans WP3] gi|212559270|gb|ACJ31724.1| Flagellar basal body rod protein [Shewanella piezotolerans WP3] Length = 244 Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats. Identities = 46/241 (19%), Positives = 87/241 (36%), Gaps = 1/241 (0%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + A+N++N DT GF+ + + + + Q Sbjct: 1 MDRMLYTAATGAARVMEAQAIRANNLANADTTGFKADLERVNAMSVTATGNSLQTRVLAQ 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + S++ G+ TG LD A+ F++ + G TR G +G L Sbjct: 61 TQSSGFSQQSGALNPTGRTLDLAINDAGLFSVMTDDGEGYTRSGAIVPDANGQLTLDGRP 120 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 +D V + + + + G + L V+ + + G+ Sbjct: 121 IAGVDGPIVLPEYRELFVGDDGRLSIVADENGIIEEVGQLKLVNPDMNIMSKGLDGLLYT 180 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 PL VTV GFLE SN ++ E+ + L+++F L+ + + EA Sbjct: 181 QDRQPLPANDEVTVSSGFLEASNVQAVGELIAAMDLSRQFEIQVKLMKSA-EKLAEAGNR 239 Query: 241 I 241 + Sbjct: 240 L 240 >gi|237796094|ref|YP_002863646.1| flagellar hook protein FlgE [Clostridium botulinum Ba4 str. 657] gi|229263494|gb|ACQ54527.1| flagellar hook protein FlgE [Clostridium botulinum Ba4 str. 657] Length = 332 Score = 131 bits (329), Expect = 8e-29, Method: Composition-based stats. Identities = 45/329 (13%), Positives = 95/329 (28%), Gaps = 90/329 (27%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50 M S G++ A + +L V +N++N +T F++ ++F +++ + Sbjct: 1 MLRSMYSGISGLKAQQTKLDVVGNNIANANTTAFKSQSIRFQDMLSQNMSSATGPSANLG 60 Query: 51 --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP------------- 95 + Q V Y G+ +TG LD A++G +F + Sbjct: 61 GTNPRQIGLGVQVAGMYTKFTTGNMQTTGRNLDSAIDGPGFFVVGKGKISDTTTIGDTGD 120 Query: 96 ---------RGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG 146 + TRDG F + DGSL+++ G + ++ + Sbjct: 121 NAGAITGGSMEVSFTRDGSFTLGKDGSLITSDGLRVMGYAIEGADITVDAGKMKVGFKNA 180 Query: 147 EISQKGKV-------------------------------------------IATMGLYSV 163 + K + + + S Sbjct: 181 DEDPKAITDKLVPLAIPDEIEKGSEKVRVQSFTIDKDGLIVASLVDGTSAALGQIAMASF 240 Query: 164 DMSQGFVRRENSGI-------------SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEM 210 G + + + + G +E SN + E Sbjct: 241 KNEGGLEKMGKNLYKNSANSGEAIIRSGRGVDAANDNSKGYGDMLNGMIEMSNVDLAEEF 300 Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +MI + F + +I ++ + E + Sbjct: 301 TEMIVANRAFQACGKMITTGDEILQELVN 329 >gi|54294164|ref|YP_126579.1| flagellar basal body rod protein FlgF [Legionella pneumophila str. Lens] gi|53753996|emb|CAH15467.1| flagellar biosynthesis protein FlgF [Legionella pneumophila str. Lens] Length = 248 Score = 131 bits (329), Expect = 8e-29, Method: Composition-based stats. Identities = 53/247 (21%), Positives = 111/247 (44%), Gaps = 7/247 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI--SF 58 M+ ++ + +R +A+N++N +T GF+ + + N +Q SF Sbjct: 1 MEPILYNSISGGRSDFKRQEIIANNLANINTPGFKADLYQAQTMYMNNANGNNQFSAHSF 60 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSA 117 + + G I+TG +LD A++GD W A++ + TR G ++ +G L++A Sbjct: 61 ITQNANGVDTSPGEIITTGRDLDVAIDGDGWIAVQDSQGREAYTRGGSLRLNPNGQLITA 120 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV---IATMGLYSVDMSQGFVRREN 174 SGK + D + I Q EI + G + +G V + V + + + + + Sbjct: 121 SGKVVLGDGGPISIPPAQSIEIGSDGTISIVPLEGDVKSLAILDRIKLVTLDRNNIYKND 180 Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 G+ + + + ++ G LE SN N++ +M MI ++F++ L+ + + Sbjct: 181 EGLIQLKSGAAIANSNI-KLQSGALEGSNVNAIDQMVAMISAGREFDAQMKLLSTVDDNG 239 Query: 235 LEAIRNI 241 + + + Sbjct: 240 QKLAQLL 246 >gi|32477363|ref|NP_870357.1| FlgF [Rhodopirellula baltica SH 1] gi|32447914|emb|CAD77434.1| FlgF [Rhodopirellula baltica SH 1] gi|327537336|gb|EGF24069.1| Flagellar basal-body rod FlgF [Rhodopirellula baltica WH47] Length = 273 Score = 131 bits (329), Expect = 8e-29, Method: Composition-based stats. Identities = 51/251 (20%), Positives = 89/251 (35%), Gaps = 14/251 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIK----VKFSE-----VVGAIKND 51 M + A A RL ++ N++N DT GF+ + +FSE +V Sbjct: 24 MPYGVYLSAAGAQAQNHRLQQISHNLANVDTPGFKPSQTILQARFSELIEEGMVPPGLGG 83 Query: 52 IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA-WFALESPRGIILTRDGRFKVTD 110 D V E VG+ +TG E DFAL +F L+ +LTR G F Sbjct: 84 ADDIGGGVTIQPEQTQFGVGAIRTTGRETDFALHDKKSFFVLQRGDEQLLTRAGDFMFDS 143 Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170 G++V++ G + P++ + + + + S + Sbjct: 144 TGTMVNSGGDPVLGKGGRPIQIDPRRPFTVGSEGTITQAGETQQLMLAQPASYGD----L 199 Query: 171 RRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + + L S V G LE S + M +MI ++ + + +I Sbjct: 200 ANVGGNLFRPLAEFSLVPDSDRNVVAGSLEQSAVSPTGTMMEMIETSRAYEANIQMIKNQ 259 Query: 231 EKSMLEAIRNI 241 + + I + Sbjct: 260 DSVLGSLIGRV 270 >gi|301631988|ref|XP_002945073.1| PREDICTED: flagellar basal-body rod protein flgF-like [Xenopus (Silurana) tropicalis] Length = 430 Score = 131 bits (329), Expect = 8e-29, Method: Composition-based stats. Identities = 54/228 (23%), Positives = 86/228 (37%), Gaps = 5/228 (2%) Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76 R + +++N++N T GFR F V ++ D F + G T Sbjct: 201 HRQAVLSNNLANVSTNGFRAEMSTFRSV--PMQGDGATTRVFALEATSGHVQTPGQVQRT 258 Query: 77 GTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQ 135 G LD G AWFA++ TR G F+VT G LV+++G + D + P Sbjct: 259 GRNLDAMAVGPAWFAVQGLDGTEAYTRAGSFQVTQAGQLVTSTGLPVLSDGGTPIDVPPG 318 Query: 136 KDEIFNVGEKGEISQKGKVIATMGLYSVDMS--QGFVRRENSGISPNIPPTPLEDLSGVT 193 + G+ A +G + ++R N G+ PL Sbjct: 319 AEITLGADGTLTAQTAGQPPAPVGRIKLATPGLDDPLQRGNDGLFRTASGAPLAQDPNAA 378 Query: 194 VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 + G LE SN N++ M MI ++F L+ E A + + Sbjct: 379 LLSGALEGSNVNAVESMVGMIAAARQFEQQMRLLQTAESGDKSAAQLL 426 Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 42/242 (17%), Positives = 74/242 (30%), Gaps = 51/242 (21%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN--DIDQKISFVAS 61 SF GL+ A + L + N++N+ TVGF+ + +F E+V + + V Sbjct: 2 SFQQGLSGLTAASKNLDVIGHNIANSGTVGFKASRTEFDEMVASAIGSANGTNGGIGVGV 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 + +++ F T D G P G ILTR +G + Sbjct: 62 KLDDVTQFGTKFAIAETTQDGYTAGQLTGINIGPDGTILTRYSNGVTRPEGVV------- 114 Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 L S +QG N+ Sbjct: 115 -------------------------------------ALASFRNTQGLSDIGNNLWVETF 137 Query: 182 PPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + ++ G LEDSN + E+ M+ + + S I ++ + Sbjct: 138 ESGQPTVGQPTSGSFGALRSGALEDSNVDLTAELVNMMTAQRAYQSNAQTIKTQDQVIST 197 Query: 237 AI 238 + Sbjct: 198 LV 199 >gi|168182737|ref|ZP_02617401.1| flagellar hook protein FlgE [Clostridium botulinum Bf] gi|182674150|gb|EDT86111.1| flagellar hook protein FlgE [Clostridium botulinum Bf] Length = 332 Score = 131 bits (329), Expect = 8e-29, Method: Composition-based stats. Identities = 45/329 (13%), Positives = 95/329 (28%), Gaps = 90/329 (27%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50 M S G++ A + +L V +N++N +T F++ ++F +++ + Sbjct: 1 MLRSMYSGISGLKAQQTKLDVVGNNIANANTTAFKSQSIRFQDMLSQNMSSATGPSANLG 60 Query: 51 --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP------------- 95 + Q V Y G+ +TG LD A++G +F + Sbjct: 61 GTNPRQIGLGVQVAGMYTKFTTGNMQTTGRNLDSAIDGPGFFVVGKGKISDTTTIGDTGD 120 Query: 96 ---------RGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG 146 + TRDG F + DGSL+++ G + ++ + Sbjct: 121 NAGAITGGSMEVSFTRDGSFTLGKDGSLITSDGLRVMGYAIEGADITVDAGKMKVGFKNA 180 Query: 147 EISQKGKV-------------------------------------------IATMGLYSV 163 + K + + + S Sbjct: 181 DEDPKAVTDKLVPLAIPDEIEKGSEKVRVQSFTIDKDGLIVASLVDGTSAALGQIAMASF 240 Query: 164 DMSQGFVRRENSGI-------------SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEM 210 G + + + + G +E SN + E Sbjct: 241 KNEGGLEKMGKNLYKNSANSGEAIIRSGRGVDAANDNSKGYGDMLNGMIEMSNVDLAEEF 300 Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +MI + F + +I ++ + E + Sbjct: 301 TEMIVANRAFQACGKMITTGDEILQELVN 329 >gi|304412507|ref|ZP_07394113.1| fagellar hook-basal body protein [Shewanella baltica OS183] gi|307307166|ref|ZP_07586904.1| fagellar hook-basal body protein [Shewanella baltica BA175] gi|304349149|gb|EFM13561.1| fagellar hook-basal body protein [Shewanella baltica OS183] gi|306910405|gb|EFN40836.1| fagellar hook-basal body protein [Shewanella baltica BA175] Length = 244 Score = 131 bits (329), Expect = 8e-29, Method: Composition-based stats. Identities = 42/242 (17%), Positives = 93/242 (38%), Gaps = 3/242 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M+ + + + + S A+N++N +T GF+ + + V + + Sbjct: 1 MEKMLYTAASGAVRILEAQSIRANNLANAETAGFKADLERVNAVPLVAQGNSLNTRVMAQ 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + S++ G TG LD A+ F++ TR G + +G ++ G+ Sbjct: 61 TESSGFSQQSGVINPTGRSLDLAIRDRGLFSVAVDGAEAYTRSGAIETNVEG-QLTIDGR 119 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ-GFVRRENSGISP 179 + + + + + G + +G +I +G + +++ G+ Sbjct: 120 PVLGIDGPIALPEYKDVFVGEDGTVSVLPAEGGIIEEVGRLKLVNPDFALMQKGQDGLLY 179 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + GV V GFLE SN ++ E+ + L+++F L+ + + EA Sbjct: 180 RRDGQAVPQDEGVLVDSGFLESSNVQAVSELIASMDLSRQFEIQVKLMKSA-EKLAEAGN 238 Query: 240 NI 241 + Sbjct: 239 RL 240 >gi|90408061|ref|ZP_01216232.1| flagellar basal-body rod protein FlgF [Psychromonas sp. CNPT3] gi|90310818|gb|EAS38932.1| flagellar basal-body rod protein FlgF [Psychromonas sp. CNPT3] Length = 248 Score = 131 bits (329), Expect = 8e-29, Method: Composition-based stats. Identities = 50/240 (20%), Positives = 101/240 (42%), Gaps = 10/240 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M I ++ L+ A+N++N + GF++ + + + F Sbjct: 1 MDRLLYISMSGAKENMNALAIHANNLANANKTGFKSSFEQARSM--QAYGEGLPTRVFSL 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119 + + E G T +LD +++G+ WF ++S G +TR G + +G L+ ++G Sbjct: 59 AENPGQNFESGILQMTQRDLDISIKGEGWFMVDSKMGGQAMTRAGGLNINPEGFLIDSTG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL------YSVDMSQGFVRRE 173 L PI IP E FN+ + G + + + + V+ + + R Sbjct: 119 NKV-LSQKGAPIFIPLPVEKFNIRKDGMVEIRPEGAPADAMEEIAQIKLVNPNIRDILRG 177 Query: 174 NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 G+ I + V+++ G LE SN N E+ +I+L ++F+ ++ + E+ Sbjct: 178 EDGLYRRIDGNDPIVDAKVSIESGSLEASNVNMSSELTGLINLQRQFDMQVKMMKKAEEM 237 >gi|146307868|ref|YP_001188333.1| flagellar basal body rod protein FlgF [Pseudomonas mendocina ymp] gi|145576069|gb|ABP85601.1| flagellar basal-body rod protein FlgF [Pseudomonas mendocina ymp] Length = 246 Score = 131 bits (329), Expect = 8e-29, Method: Composition-based stats. Identities = 49/245 (20%), Positives = 91/245 (37%), Gaps = 6/245 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + L A+N++N T GFR + + + + F Sbjct: 1 MDKMLYVSMTGAQNNTLALRAHANNLANVSTSGFRRDFEQARSM--PLFGESYPARVFAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 S + GS TG +LD A+ G W A+++P R + G L + +G Sbjct: 59 SERPGTDFRAGSLQETGRDLDVAIGGKGWIAVQAPDGSEAYVRTASLNIDALGVLRTGNG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEIS---QKGKVIATMGLYSVDMSQGFVRRENSG 176 + + + + QK EI G + + + V+ + + G Sbjct: 119 LPVMGNAGPIAVPPEQKVEIGQDGTISIRALGENPNVLAEVDRIKLVNPDPKSLEKGTDG 178 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + +E + V V GFLE SN N++ EM ++ L+++F ++ E + Sbjct: 179 LIRVKGQPEVEADATVQVTSGFLEASNVNAVEEMTAILSLSRQFELSVKMMRTAEDNASA 238 Query: 237 AIRNI 241 R + Sbjct: 239 MARVL 243 >gi|148926662|ref|ZP_01810343.1| putative flagellar basal-body rod protein [Campylobacter jejuni subsp. jejuni CG8486] gi|145845181|gb|EDK22276.1| putative flagellar basal-body rod protein [Campylobacter jejuni subsp. jejuni CG8486] Length = 270 Score = 131 bits (329), Expect = 9e-29, Method: Composition-based stats. Identities = 50/268 (18%), Positives = 103/268 (38%), Gaps = 25/268 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDID---- 53 MQ + + +L + +N++N +T G++ V F + ++++ Sbjct: 1 MQNGYYQATGGMVTQFNKLDVITNNLANINTSGYKRDDVVIADFKRIFKETQDELPIENH 60 Query: 54 ----------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILT 101 +EY +GS +T LD A+ + F + LT Sbjct: 61 TRDASRFVNTTIDRIPQVSQEYTDFSLGSLKATNNPLDLAMTREDAFYLVQTKDGEVRLT 120 Query: 102 RDGRFKVTDDGSLVSASGKYP-----VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156 +DG F++ D+G LV+ G + + I+IP +V + G I G A Sbjct: 121 KDGNFQLDDEGYLVNKQGYKVLSSDYFNNPQNADIRIPNGAVQISVDKNGSIEVDGAQNA 180 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + + VD + + ++ + + + +++GF + SN N + EM +I Sbjct: 181 RLFVAQVDDIRALQKDGDNVYKIDDLTRIRDLKNSNAIRQGFSQGSNVNPVTEMVGLIEA 240 Query: 217 TQKFNSITTLIDEN-EKSMLEAIRNIAS 243 + ++ + + EAI +A+ Sbjct: 241 NRMVEMYQKVMTAHMDDLNQEAINKLAA 268 >gi|315121847|ref|YP_004062336.1| flagellar basal body rod protein FlgG [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495249|gb|ADR51848.1| flagellar basal body rod protein FlgG [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 262 Score = 131 bits (329), Expect = 9e-29, Method: Composition-based stats. Identities = 45/254 (17%), Positives = 96/254 (37%), Gaps = 22/254 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55 +F I A A + L +A+N++N +T G++ + +F++ + + Sbjct: 1 MKAFTIAAAGMSAQQTNLEIIANNIANINTTGYKRARAEFADFLYQAEKAAGSPSQSADQ 60 Query: 56 ---------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGR 105 S V G + TG LD AL G WF +E+P + TR G Sbjct: 61 SVVPEGINIGSGVQISSVRNVYTQGELVHTGNSLDLALVGRGWFQVETPDKTVMYTRAGS 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 F + G LV++ G + + + + + + + + + + Sbjct: 121 FNIDSKGQLVTSDGNTLLPGITIPEEARELTVSRSGQIMAVTGKNSDFQPLGQLLIANFV 180 Query: 165 MSQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G ++ ++ +D +K+G+LE SN +++ E+ +MI + Sbjct: 181 NEAGLRNIGDNLVTRTSVSGEAIISSPDDAGFAHIKQGYLEASNVDAVKEISEMISAQRA 240 Query: 220 FNSITTLIDENEKS 233 + + +I ++ Sbjct: 241 YEMNSKVIQAADEM 254 >gi|225871944|ref|YP_002753398.1| putative flagellar basal-body rod protein FlgG [Acidobacterium capsulatum ATCC 51196] gi|225793888|gb|ACO33978.1| putative flagellar basal-body rod protein FlgG [Acidobacterium capsulatum ATCC 51196] Length = 245 Score = 131 bits (329), Expect = 9e-29, Method: Composition-based stats. Identities = 53/246 (21%), Positives = 99/246 (40%), Gaps = 9/246 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M++ + L LA Q L +VA N++N T GFR + F +V+ + + Q V Sbjct: 1 MESGYYAALTGLLARSQALDSVASNLANAGTAGFRAQQDYFRDVLAGPRANDSQLDQTVD 60 Query: 61 SGKEYLSK----EVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVS 116 + G +TG LD A++G +F +++P G+ TRDGR + G L++ Sbjct: 61 NYGVLGGTLLDLAQGPIQATGNPLDLAIQGGGFFEVQTPNGVRYTRDGRLVRSTKGVLIT 120 Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 G + I +GE G IS G + + ++ ++ Sbjct: 121 GDGDPVLNAKGKP---IVLPTGRPVIGEDGTISVDGAIAGKIAVFQFAGARDLEAEGVGL 177 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE-NEKSML 235 P P T+++G LE SN + ++ +I + ++ + + Sbjct: 178 YRPVGKAKPAPATGF-TLRQGALEGSNQDVIHGTMDLIFVQRQAQMMEKALSIFYNDFNK 236 Query: 236 EAIRNI 241 A +++ Sbjct: 237 TATQDL 242 >gi|302387772|ref|YP_003823594.1| fagellar hook-basal body protein [Clostridium saccharolyticum WM1] gi|302198400|gb|ADL05971.1| fagellar hook-basal body protein [Clostridium saccharolyticum WM1] Length = 256 Score = 131 bits (329), Expect = 9e-29, Method: Composition-based stats. Identities = 56/257 (21%), Positives = 105/257 (40%), Gaps = 16/257 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA-----IKNDIDQK 55 M+ SF IG L + +L V++N++N +TVGF+ FS++V A N+ + Sbjct: 1 MEQSFYIGALGALGQQTKLGIVSNNVANVNTVGFKAQYSVFSDLVHAEMRNTQGNNGAKS 60 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR--GIILTRDGRFK---VTD 110 S + + TG E D+A+ G+ +F L+ P + +RDGRF+ + D Sbjct: 61 GSGTKVDQTKTDFSAMPYKETGLEHDYAIAGEGFFMLKDPVTGEVSYSRDGRFQLSRMED 120 Query: 111 DGSLVSASGKYPVLDM-----ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 LV++ K + V E E+ E+ + +G+Y+ Sbjct: 121 KFYLVNSDNKRVLNMDQEEISYDVKPATYPGSEEETEEEETELEEGEHDPRAIGVYTFAR 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225 G + ++ S L V + LE+S + EM +MI + ++ Sbjct: 181 RDGMESQGDNVFSVTEKNGEPILLENAKVVKRALEESGVDFAQEMTRMIEAQRAYSYALK 240 Query: 226 LIDENEKSMLEAIRNIA 242 ++ +++ I + Sbjct: 241 MVQTSDEV-EATINTLR 256 >gi|261409669|ref|YP_003245910.1| fagellar hook-basal body protein [Paenibacillus sp. Y412MC10] gi|261286132|gb|ACX68103.1| fagellar hook-basal body protein [Paenibacillus sp. Y412MC10] Length = 293 Score = 131 bits (329), Expect = 9e-29, Method: Composition-based stats. Identities = 45/291 (15%), Positives = 101/291 (34%), Gaps = 49/291 (16%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRT---IKVKFSEVV---------GAI 48 M + + EQR +TV N++N +T G++ ++ F EV+ + Sbjct: 1 MLRGLYTAASGMMTQEQRHNTVTQNIANVNTTGYKATNSVQRSFPEVLVSMIGGNESSNV 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFAL------------------------ 84 + + + V + + G+ T DFAL Sbjct: 61 GRKLGKFNTGVYAEESISLYTEGALRETNKTTDFALVSSFTVQNPATGQAYPFDASGRYV 120 Query: 85 ---------EGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQ 135 + + TR+G F+V+ +G+L+S SG + + + Sbjct: 121 DENGEVIYRPEGFFTVQNENGDVRYTRNGSFRVSPEGNLLSESGYQVLDNNNRPIVLTGP 180 Query: 136 KDEIFNVGEKGEISQKGKVIATM-GLYSVDMSQGFVRRENSGIS---PNIPPTPLEDLSG 191 + + + G+ + G+ V G +R + P+ + Sbjct: 181 ASDFTVNEQGEIMDAAGRGTGIILGVSIVSQPHGLIREGHGVFRMADPDGEVRFMTPADN 240 Query: 192 VTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 V++GF+E SN + M ++ + + + ++ ++++ +A+ I Sbjct: 241 GVVRQGFIEGSNVDPTQSMVELTAALRAYETNQKIVQYYDRTLEKAVNEIG 291 >gi|308273543|emb|CBX30145.1| hypothetical protein N47_D29540 [uncultured Desulfobacterium sp.] Length = 226 Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 51/240 (21%), Positives = 102/240 (42%), Gaps = 18/240 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M +S + L + R T+++N++N +T F+ V F + + ++ ID Sbjct: 1 MISSNYSLVEGSLIQQLRFDTLSNNLANVNTNAFKQDIVSFDQNLSLNRSSID------- 53 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 G + TG D ALEG +F +++ GI +RDG F + DG LV+ +G Sbjct: 54 -------LSSGPIVFTGNAFDVALEGPGFFKIQTASGIKYSRDGAFSLNRDGMLVNRNGD 106 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 + I +G G+I++ G + + + S+ + + + Sbjct: 107 KVL----GKNGPITLTGNNIVIGSDGQITEDGNPGDKIFVADIKDSKLLKKEGMNYYVYD 162 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 + V++K+ ++E SN N EM +M+ + F SI + +++ + + + Sbjct: 163 GEAKNITSAEKVSIKQSYIEKSNVNVTEEMIRMVETLRTFESIQKALQNTDETTGKMVND 222 >gi|86153287|ref|ZP_01071491.1| flagellar basal-body rod protein [Campylobacter jejuni subsp. jejuni HB93-13] gi|85843013|gb|EAQ60224.1| flagellar basal-body rod protein [Campylobacter jejuni subsp. jejuni HB93-13] Length = 270 Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 50/268 (18%), Positives = 101/268 (37%), Gaps = 25/268 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDID---- 53 MQ + + +L + +N++N +T G++ V F + ++++ Sbjct: 1 MQNGYYQATGGMVTQFNKLDVITNNLANINTSGYKRDDVVIADFKRIFKETQDELPIENH 60 Query: 54 ----------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILT 101 +EY +GS +T LD A+ + F + LT Sbjct: 61 TRDASRFVNTTIDGIPQVSQEYTDFSLGSLKATNNPLDLAMTREDAFYLVQTKDGEVRLT 120 Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQ-----IPQKDEIFNVGEKGEISQKGKVIA 156 +DG F++ D+G LV+ G + Q IP +V + G I G A Sbjct: 121 KDGNFQLDDEGYLVNKQGYKVLSSDYFNNPQNAGICIPNGAVQISVDKNGSIEVDGAQNA 180 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + + VD + + ++ + + + +++GF + SN N + EM +I Sbjct: 181 RLFVAQVDDIRALQKDGDNVYKIDDLTRIRDLKNSNAIRQGFSQGSNVNPVTEMVGLIEA 240 Query: 217 TQKFNSITTLIDEN-EKSMLEAIRNIAS 243 + ++ + + EAI +A+ Sbjct: 241 NRMVEMYQKVMTAHMDDLNQEAINKLAA 268 >gi|57237000|ref|YP_178801.1| flagellar basal-body rod protein [Campylobacter jejuni RM1221] gi|86149760|ref|ZP_01067989.1| flagellar basal-body rod protein [Campylobacter jejuni subsp. jejuni CF93-6] gi|57165804|gb|AAW34583.1| flagellar basal-body rod protein [Campylobacter jejuni RM1221] gi|85839578|gb|EAQ56838.1| flagellar basal-body rod protein [Campylobacter jejuni subsp. jejuni CF93-6] gi|315058160|gb|ADT72489.1| Flagellar basal-body rod protein flgF [Campylobacter jejuni subsp. jejuni S3] Length = 270 Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 50/268 (18%), Positives = 103/268 (38%), Gaps = 25/268 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDID---- 53 MQ + + +L + +N++N +T G++ V F + ++++ Sbjct: 1 MQNGYYQATGGMVTQFNKLDVITNNLANINTSGYKRDDVVIADFKRIFKETQDELPIENH 60 Query: 54 ----------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILT 101 +EY +GS +T LD A+ + F + LT Sbjct: 61 TRDASRFVNTTIDRIPQVSQEYTDFSLGSLKATNNPLDLAMTREDAFYLVQTKDGEVRLT 120 Query: 102 RDGRFKVTDDGSLVSASGKYP-----VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156 +DG F++ D+G LV+ G + + I+IP +V + G I G A Sbjct: 121 KDGNFQLDDEGYLVNKQGYKVLSSDYFNNPQNAGIRIPNGAVQISVDKNGSIEVDGAQNA 180 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + + VD + + ++ + + + +++GF + SN N + EM +I Sbjct: 181 RLFVAQVDDIRALQKDGDNVYKIDDLTRIRDLKNSNAIRQGFSQGSNVNPVTEMVGLIEA 240 Query: 217 TQKFNSITTLIDEN-EKSMLEAIRNIAS 243 + ++ + + EAI +A+ Sbjct: 241 NRMVEMYQKVMTAHMDDLNQEAINKLAA 268 >gi|307609978|emb|CBW99507.1| flagellar biosynthesis protein FlgF [Legionella pneumophila 130b] Length = 248 Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 53/247 (21%), Positives = 110/247 (44%), Gaps = 7/247 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI--SF 58 M+ ++ + +R +A+N++N +T GF+ + + N +Q SF Sbjct: 1 MEPILYNSISGSRSDFKRQEIIANNLANINTPGFKADLYQAQTMYMNNANGNNQFSAHSF 60 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSA 117 + + G I+TG +LD A++GD W A++ + TR G ++ +G L++A Sbjct: 61 ITQNANGIDTSPGEIITTGRDLDVAIDGDGWMAVQDSQGREAYTRGGSLRLNPNGQLITA 120 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV---IATMGLYSVDMSQGFVRREN 174 SGK + D + I Q EI + G + +G V + V + + + + + Sbjct: 121 SGKVVLGDGGPISIPPAQSIEIGSDGTISIVPLEGDVKSLAILDRIKLVTLDKNNIYKND 180 Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 G+ + + ++ G LE SN N++ +M MI ++F++ L+ + + Sbjct: 181 EGLIQLKSGAATANSNI-KLQSGALEGSNVNAIDQMVAMISAGREFDAQMKLLSTVDDNG 239 Query: 235 LEAIRNI 241 + + + Sbjct: 240 QKLAQLL 246 >gi|283956106|ref|ZP_06373593.1| flagellar basal-body rod protein [Campylobacter jejuni subsp. jejuni 1336] gi|283792426|gb|EFC31208.1| flagellar basal-body rod protein [Campylobacter jejuni subsp. jejuni 1336] Length = 270 Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 50/268 (18%), Positives = 103/268 (38%), Gaps = 25/268 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDID---- 53 MQ + + +L + +N++N +T G++ V F + ++++ Sbjct: 1 MQNGYYQATGGMVTQFNKLDVITNNLANINTSGYKRDDVVIADFKRIFKETQDELPIENH 60 Query: 54 ----------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILT 101 +EY +GS +T LD A+ + F + LT Sbjct: 61 TRDASRFVNTTIDGIPQVSQEYTDFSLGSLKATNNPLDLAMTREDAFYLVQTKDGEVRLT 120 Query: 102 RDGRFKVTDDGSLVSASGKYP-----VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156 +DG F++ D+G LV+ G + + I+IP +V + G I G A Sbjct: 121 KDGNFQLDDEGYLVNKQGYKVLSSDYFNNPQNAGIRIPNGAVQISVDKNGSIEVDGVQNA 180 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + + VD + + ++ + + + +++GF + SN N + EM +I Sbjct: 181 RLFVAQVDDIRALQKDGDNVYKIDDLTRIRDLENSNAIRQGFSQGSNVNPVTEMVGLIEA 240 Query: 217 TQKFNSITTLIDEN-EKSMLEAIRNIAS 243 + ++ + + EAI +A+ Sbjct: 241 NRMVEMYQKVMTAHMDDLNQEAINKLAA 268 >gi|315453646|ref|YP_004073916.1| putative flagellar basal-body rod protein [Helicobacter felis ATCC 49179] gi|315132698|emb|CBY83326.1| putative flagellar basal-body rod protein [Helicobacter felis ATCC 49179] Length = 271 Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 57/269 (21%), Positives = 107/269 (39%), Gaps = 26/269 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + RL +++N++N +T GF+ V + + +N DQ Sbjct: 1 MTNGYYDATGGMVTEFNRLDQISNNLANLNTNGFKRDDVVVGDFLHLYQNYRDQLPLQDQ 60 Query: 61 SGK-----------------EYLSKEVGSFISTGTELDFALEG-DAWFALESPRGIILTR 102 + + Y +G+ T +LDFAL +A+FA+++P+GI TR Sbjct: 61 TKQAAKYLNRNLNRVPIISERYTDYSLGAVQKTDGDLDFALSDPNAYFAVQTPQGIAFTR 120 Query: 103 DGRFKVTDDGSLVSASGKYP---VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG 159 DG F + G L + G + + IQ+ + G G Sbjct: 121 DGSFTIDSQGFLSTKEGYHVLSREGLESGGGIQMLPGARVSVGNSGAVFFHDGNEEVPGG 180 Query: 160 LYSVD--MSQGFVRRENSGISPNIPPTPLEDLS--GVTVKRGFLEDSNANSMYEMGQMIH 215 +V SQ +++ + + E + V +GFLE SN N++ EM ++I Sbjct: 181 NIAVVGFQSQKLLKKIGNNLYTYPQERMAERVELNAPIVHQGFLEKSNVNAVREMTRLIE 240 Query: 216 LTQKFNSITTLIDEN-EKSMLEAIRNIAS 243 + + + ++ + + EAI +A+ Sbjct: 241 ANRLVDMYSKVLRTHMDDMHAEAISKLAT 269 >gi|160939652|ref|ZP_02087000.1| hypothetical protein CLOBOL_04544 [Clostridium bolteae ATCC BAA-613] gi|158437443|gb|EDP15207.1| hypothetical protein CLOBOL_04544 [Clostridium bolteae ATCC BAA-613] Length = 246 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 52/249 (20%), Positives = 94/249 (37%), Gaps = 12/249 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIK---VKFSEVVGAIKND----ID 53 M + F + L ++ L+ A+N++N T G++ + F + + N + Sbjct: 1 MFSGFYTAASGMLMNQRSLNMAANNIANVKTSGYKPKRLVKTTFDQQLVREMNGRTEGLG 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113 Q + +E + G TG D A+ GD +F ++ G LTR+G F D+G+ Sbjct: 61 QGSTISVGTREMTTHGQGPIEDTGKTYDLAINGDGFFVIQGENGQYLTRNGHFTRDDEGN 120 Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRE 173 L+ + D + +E F VG G I V + + Sbjct: 121 LMLPGVGQLMGDG----GPVYVDEEGFRVGADGIIYDNEDGALDQIQIVVPDNYDSLEFY 176 Query: 174 NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 ++G L + TV +G LE S N EM + + + + F S + ++ Sbjct: 177 DNGTYGAGAGVELSQV-YPTVYQGKLEQSGVNLNNEMTRAMEVQRAFQSCGKALTIIDQM 235 Query: 234 MLEAIRNIA 242 + I Sbjct: 236 NQKTANEIG 244 >gi|57167708|ref|ZP_00366848.1| flagellar basal-body rod protein (flgG) [Campylobacter coli RM2228] gi|305433214|ref|ZP_07402370.1| flagellar basal-body rod protein [Campylobacter coli JV20] gi|57020830|gb|EAL57494.1| flagellar basal-body rod protein (flgG) [Campylobacter coli RM2228] gi|304443915|gb|EFM36572.1| flagellar basal-body rod protein [Campylobacter coli JV20] Length = 270 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 102/268 (38%), Gaps = 25/268 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDID---- 53 MQ + + +L + +N++N +T G++ V F + ++++ Sbjct: 1 MQNGYYQATGGMVTQFNKLDVITNNLANINTSGYKRDDVVIADFKRIFKETQDELPIENH 60 Query: 54 ----------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILT 101 + Y +GS +T LD A+ + F I L+ Sbjct: 61 TRDASRFVNTTIDGVPQVSQGYTDFSLGSLKTTNNPLDLAITREDAFYLVQTKDGEIRLS 120 Query: 102 RDGRFKVTDDGSLVSASGKY-----PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156 +DG F++ ++G LV+ G + + I++P NV + G I G A Sbjct: 121 KDGNFQLNEEGYLVNKQGYRILSSDYFNNPQNAGIRLPNGAVYINVDKNGSIEVDGVQNA 180 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + + VD + + ++ + + + V++GF + SN N + EM +I Sbjct: 181 RLFIAQVDDIRALQKDGDNVYRIDDLTRIRDLDNSNAVRQGFSQGSNVNPVTEMVGLIEA 240 Query: 217 TQKFNSITTLIDEN-EKSMLEAIRNIAS 243 + ++ + + EAI +A+ Sbjct: 241 NRMVEMYQKVMTAHMDDLNQEAINKLAA 268 >gi|319790435|ref|YP_004152068.1| flagellar hook-basal body protein [Thermovibrio ammonificans HB-1] gi|317114937|gb|ADU97427.1| flagellar hook-basal body protein [Thermovibrio ammonificans HB-1] Length = 238 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 51/239 (21%), Positives = 93/239 (38%), Gaps = 11/239 (4%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTI-KVKFSEVVGAIKNDIDQKISFVASGK 63 + A ++L T +N++N +T GF+ I + + S+ V +D + F Sbjct: 8 IYLLAAGGERALEQLDTTTNNLANVNTPGFKRIIEEEMSQHVPPNGSDAYNMLIFPRFKS 67 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPV 123 + G T + D AL+G +FA+++P G + TR+G F + +G LV A+G + Sbjct: 68 TQVVLSEGPLRKTDSPFDLALKGRGFFAVKTPNGELYTRNGHFTLNANGVLVDANGNPVL 127 Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183 S + V G + + + + + + + G+ Sbjct: 128 --DISGKEIALSGNGKVTVTPDGLVFEGDRQVGVLKIVDFAKVKPVGNSYYQGVGAPT-- 183 Query: 184 TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 + V +GFLE SN N + EM +I ++F L + L I Sbjct: 184 -----ATDAEVLQGFLEGSNVNPVKEMVNLIEAQRRFEIYGNLTRALAQVDLRT-NEIG 236 >gi|254457917|ref|ZP_05071344.1| flagellar basal body rod protein [Campylobacterales bacterium GD 1] gi|207085310|gb|EDZ62595.1| flagellar basal body rod protein [Campylobacterales bacterium GD 1] Length = 273 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 56/270 (20%), Positives = 108/270 (40%), Gaps = 28/270 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDIDQ--- 54 MQ+ + A + RL T+A+N++N +TVGF+ + F + ++++ Sbjct: 1 MQSGYYSSAAGMVTQFNRLDTIANNLANVNTVGFKEDNLVVGDFQRLYKEARDELPNKNH 60 Query: 55 -----------KISFVASGKEYLSKEVGSFISTGTELDFALEGDA-WFALESPRGIILTR 102 Y VG+ T ++DFAL + +F +++P+G+ LTR Sbjct: 61 SEDGAQFLNRAMTKAPQVVDSYTDFTVGNTQQTDNDMDFALSREGLFFLVKTPQGVRLTR 120 Query: 103 DGRFKVTDDGSLVSASGKYPVLDMA---------SVPIQIPQKDEIFNVGEKGEISQKGK 153 DG F D+G LV+ +G + + + + + D+ + + S K Sbjct: 121 DGSFTKDDEGRLVTKNGYEVLPNDYFEAGGNITFNDDENVIKVDKHGQIYKNIPNSVKLV 180 Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQM 213 + + + D + N+ + + V +GF+E SN N++ M QM Sbjct: 181 QGSHLFVAQPDNVALLKKEGNNLYRYDGTTDLKSLDNTEAVMQGFVEKSNVNAVKMMTQM 240 Query: 214 IHLTQKFNSITTLID-ENEKSMLEAIRNIA 242 I + + + + +AI IA Sbjct: 241 IETNRLVGMYQKAMSVQMDDMNNDAINKIA 270 >gi|86151576|ref|ZP_01069790.1| flagellar basal-body rod protein [Campylobacter jejuni subsp. jejuni 260.94] gi|157414984|ref|YP_001482240.1| flagellar basal-body rod protein [Campylobacter jejuni subsp. jejuni 81116] gi|85841205|gb|EAQ58453.1| flagellar basal-body rod protein [Campylobacter jejuni subsp. jejuni 260.94] gi|157385948|gb|ABV52263.1| putative flagellar basal-body rod protein [Campylobacter jejuni subsp. jejuni 81116] gi|307747621|gb|ADN90891.1| Flagellar basal-body rod protein [Campylobacter jejuni subsp. jejuni M1] gi|315931896|gb|EFV10851.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 327] Length = 270 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 50/268 (18%), Positives = 103/268 (38%), Gaps = 25/268 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDID---- 53 MQ + + +L + +N++N +T G++ V F + ++++ Sbjct: 1 MQNGYYQATGGMVTQFNKLDVITNNLANINTSGYKRDDVVIADFKRIFKETQDELPIENH 60 Query: 54 ----------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILT 101 +EY +GS +T LD A+ + F + LT Sbjct: 61 TRDASRFVNTTIDGIPQVSQEYTDFSLGSLKATNNPLDLAMTREDAFYLVQTKDGEVRLT 120 Query: 102 RDGRFKVTDDGSLVSASGKYP-----VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156 +DG F++ D+G LV+ G + + I+IP +V + G I G A Sbjct: 121 KDGNFQLDDEGYLVNKQGYKVLSSDYFNNPQNAGIRIPNGAVQISVDKNGSIEVDGAQNA 180 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + + VD + + ++ + + + +++GF + SN N + EM +I Sbjct: 181 RLFVAQVDDIRALQKDGDNVYKIDDLTRIRDLENSNAIRQGFSQGSNVNPVTEMVGLIEA 240 Query: 217 TQKFNSITTLIDEN-EKSMLEAIRNIAS 243 + ++ + + EAI +A+ Sbjct: 241 NRMVEMYQKVMTAHMDDLNQEAINKLAA 268 >gi|322378390|ref|ZP_08052845.1| flagellar basal-body rod protein (flgG) [Helicobacter suis HS1] gi|322380258|ref|ZP_08054478.1| flagellar basal-body rod protein (flgG) [Helicobacter suis HS5] gi|321147295|gb|EFX41975.1| flagellar basal-body rod protein (flgG) [Helicobacter suis HS5] gi|321149203|gb|EFX43648.1| flagellar basal-body rod protein (flgG) [Helicobacter suis HS1] Length = 286 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 54/268 (20%), Positives = 110/268 (41%), Gaps = 26/268 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + ++ +L +++N++N +T GF+ V + + +N D+ Sbjct: 16 MTSGYYAATGGMVSEFNKLDQISNNLANLNTPGFKRDDVVVGDFLRLYQNYRDKLPLHDQ 75 Query: 61 SGK-----------------EYLSKEVGSFISTGTELDFALEG-DAWFALESPRGIILTR 102 + + Y +G T ELDFAL +A+FA+++P+G+ TR Sbjct: 76 TKQAAKYLNRNLNRVPIITERYTDYSLGPMQKTDNELDFALSDSNAYFAVQTPQGVAFTR 135 Query: 103 DGRFKVTDDGSLVSASGKYPV---LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG 159 DG F + G L + G + + IQ+ + ++G G Sbjct: 136 DGSFTIDSQGFLSTKEGYHVLSRGGIENQAGIQMLPGSSVSVNPNGAIFFRQGDEEVPGG 195 Query: 160 LYSVDM--SQGFVRRENS--GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIH 215 ++ SQ +++ + P +L+ V++ FLE SN N++ EM ++I Sbjct: 196 NLAIVGFESQKLLKKIGNNLYTYPQEKMAERVELNAPIVRQHFLEKSNVNAVLEMTRLIE 255 Query: 216 LTQKFNSITTLIDEN-EKSMLEAIRNIA 242 + + + ++ + + EAI +A Sbjct: 256 ANRLVDMYSKVLKTHMDDMHTEAINKLA 283 >gi|88596898|ref|ZP_01100134.1| flagellar basal-body rod protein [Campylobacter jejuni subsp. jejuni 84-25] gi|218562336|ref|YP_002344115.1| flagellar basal-body rod protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|88190587|gb|EAQ94560.1| flagellar basal-body rod protein [Campylobacter jejuni subsp. jejuni 84-25] gi|112360042|emb|CAL34834.1| flagellar basal-body rod protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284925953|gb|ADC28305.1| flagellar basal-body rod protein [Campylobacter jejuni subsp. jejuni IA3902] gi|315926811|gb|EFV06185.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 270 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 50/268 (18%), Positives = 103/268 (38%), Gaps = 25/268 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDID---- 53 MQ + + +L + +N++N +T G++ V F + ++++ Sbjct: 1 MQNGYYQATGGMVTQFNKLDVITNNLANINTSGYKRDDVVIADFKRIFKETQDELPIENH 60 Query: 54 ----------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILT 101 +EY +GS +T LD A+ + F + LT Sbjct: 61 TRDASRFVNTTIDGIPQVSQEYTDFSLGSLKATNNPLDLAMTREDAFYLVQTKDGEVRLT 120 Query: 102 RDGRFKVTDDGSLVSASGKYP-----VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156 +DG F++ D+G LV+ G + + I+IP +V + G I G A Sbjct: 121 KDGNFQLDDEGYLVNKQGYKVLSSDYFNNPQNAGIRIPNGAVQISVDKNGSIEVDGAQNA 180 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + + VD + + ++ + + + +++GF + SN N + EM +I Sbjct: 181 RLFVAQVDDIRALQKDGDNVYKIDDLTRIRDLKNSNAIRQGFSQGSNVNPVTEMVGLIEA 240 Query: 217 TQKFNSITTLIDEN-EKSMLEAIRNIAS 243 + ++ + + EAI +A+ Sbjct: 241 NRMVEMYQKVMTAHMDDLNQEAINKLAA 268 >gi|56421866|ref|YP_149184.1| flagellar hook-basal body protein [Geobacillus kaustophilus HTA426] gi|56381708|dbj|BAD77616.1| flagellar hook-basal body protein [Geobacillus kaustophilus HTA426] Length = 273 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 58/273 (21%), Positives = 107/273 (39%), Gaps = 31/273 (11%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S AL+QRL T++ N++N++TVGF+ + F+E++ + + Sbjct: 1 MLRSMLTAANTMNALQQRLDTISHNIANSNTVGFKRREASFAELLTQQIDRLPNDEAPRQ 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEG-DAWFA-----LESPRGIILTR 102 + + L + G+ + TG LDFAL + WF I TR Sbjct: 61 TPEGVRYGNGARLASTMLITKQGALVETGRRLDFALTDENQWFRVRLADQNGAETIGYTR 120 Query: 103 DGRFKVTDDGSL--VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK-----VI 155 G F + ++ S VLD + PI +P + G ++ Sbjct: 121 AGNFSLAPMNGQLALTTSDGLFVLDERNAPIVLPADAHDVQMSPTGTLTATNTDGRVVAR 180 Query: 156 ATMGLYSVDMSQGFVRRENSGIS-PNIPPTPLEDL----SGVTVKRGFLEDSNANSMYEM 210 +G+ + Q R + + PN+P E ++VK+G LE +N + EM Sbjct: 181 VNLGVTMIRRPQLLEARGGNVYALPNVPGAAEELNGSLRGQISVKQGALEQANVDLGEEM 240 Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 ++ ++ + + +E+ + I + S Sbjct: 241 VGLMATSRAYQLNARAVSISEQMLG-LINGMRS 272 >gi|205355539|ref|ZP_03222310.1| putative flagellar basaL body rod protein [Campylobacter jejuni subsp. jejuni CG8421] gi|205346773|gb|EDZ33405.1| putative flagellar basaL body rod protein [Campylobacter jejuni subsp. jejuni CG8421] Length = 270 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 50/268 (18%), Positives = 103/268 (38%), Gaps = 25/268 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDID---- 53 MQ + + +L + +N++N +T G++ V F + ++++ Sbjct: 1 MQNGYYQATGGMVTQFNKLDVITNNLANINTSGYKRDDVVIADFKRIFKETQDELPIENH 60 Query: 54 ----------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILT 101 +EY +GS +T LD A+ + F + LT Sbjct: 61 TRDASRFVNTTIDGIPQVSQEYTDFSLGSLKATNNPLDLAMTREDAFYLVQTKDGEVRLT 120 Query: 102 RDGRFKVTDDGSLVSASGKYP-----VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156 +DG F++ D+G LV+ G + + I+IP +V + G I G A Sbjct: 121 KDGNFQLDDEGYLVNKQGYKVLSSDYFNNPQNAGIRIPNSAVQISVDKNGSIEVDGAQNA 180 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + + VD + + ++ + + + +++GF + SN N + EM +I Sbjct: 181 RLFVAQVDDIRALQKDGDNVYKIDDLTRIRDLKNSNAIRQGFSQGSNVNPVTEMVGLIEA 240 Query: 217 TQKFNSITTLIDEN-EKSMLEAIRNIAS 243 + ++ + + EAI +A+ Sbjct: 241 NRMVEMYQKVMTAHMDDLNQEAINKLAA 268 >gi|121612923|ref|YP_001000393.1| flagellar basal-body rod protein [Campylobacter jejuni subsp. jejuni 81-176] gi|167005336|ref|ZP_02271094.1| flagellar basal-body rod protein [Campylobacter jejuni subsp. jejuni 81-176] gi|87249505|gb|EAQ72465.1| flagellar basal-body rod protein [Campylobacter jejuni subsp. jejuni 81-176] Length = 270 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 102/268 (38%), Gaps = 25/268 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDID---- 53 MQ + + +L + +N++N +T G++ V F + ++++ Sbjct: 1 MQNGYYQATGGMVTQFNKLDVITNNLANINTSGYKRDDVVIAGFKRIFKETQDELPIENH 60 Query: 54 ----------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILT 101 +EY +G +T LD A+ + F + LT Sbjct: 61 TRDASRFVNTTIDGIPQVSQEYTDFSLGFLKATNNPLDLAMTREDAFYLVQTKDGEVRLT 120 Query: 102 RDGRFKVTDDGSLVSASGKYP-----VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156 +DG F++ D+G LV+ G + + I+IP +V + G I G A Sbjct: 121 KDGNFQLDDEGYLVNKQGYKVLSSDYFNNPQNAGIRIPNGAVQISVDKNGSIEVDGAQNA 180 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + + VD + + ++ + + + +++GF + SN N + EM +I Sbjct: 181 RLFVAQVDDIRALQKDGDNVYKIDDLTRIRDLENSNAIRQGFSQGSNVNPVTEMVGLIEA 240 Query: 217 TQKFNSITTLIDEN-EKSMLEAIRNIAS 243 + ++ + + EAI +A+ Sbjct: 241 NRMVEMYQKVMTAHMDDLNQEAINKLAT 268 >gi|91794994|ref|YP_564645.1| flagellar basal-body rod FlgF [Shewanella denitrificans OS217] gi|91716996|gb|ABE56922.1| Flagellar basal-body rod FlgF [Shewanella denitrificans OS217] Length = 244 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 45/242 (18%), Positives = 90/242 (37%), Gaps = 3/242 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + S A+N++N +T GF+ + + V Sbjct: 1 MDKMLYTAASGASRIMEAQSIRANNLANAETTGFKADLERVKSMALPGVEASLSTRVLVQ 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + S++ G TG LD A+ F + G TR G +G ++ +G+ Sbjct: 61 TQSNGFSQQSGEMNHTGRNLDMAIRDRGLFTVMVDGGEAYTRAGAMIADAEG-QLTVNGR 119 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ-GFVRRENSGISP 179 + + + + + G + +G VI +G + + + + G+ Sbjct: 120 PVLGIDGPMVLPEHKDLFVGEDGTISVLPAEGGVIQEVGRLKMVNPELNELTKGADGLLY 179 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 I L GV V G+LE SN ++ E+ + L+++F L+ + + EA Sbjct: 180 PIAAGVLAADDGVQVDSGYLESSNVQAVSELIASMDLSRQFEIQVKLMKSA-EKLAEAGN 238 Query: 240 NI 241 + Sbjct: 239 RL 240 >gi|28869143|ref|NP_791762.1| flagellar basal-body rod protein FlgF [Pseudomonas syringae pv. tomato str. DC3000] gi|213967580|ref|ZP_03395728.1| flagellar basal-body rod protein FlgF [Pseudomonas syringae pv. tomato T1] gi|301385715|ref|ZP_07234133.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv. tomato Max13] gi|302060072|ref|ZP_07251613.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv. tomato K40] gi|302134831|ref|ZP_07260821.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28852383|gb|AAO55457.1| flagellar basal-body rod protein FlgF [Pseudomonas syringae pv. tomato str. DC3000] gi|213927881|gb|EEB61428.1| flagellar basal-body rod protein FlgF [Pseudomonas syringae pv. tomato T1] gi|331017023|gb|EGH97079.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 246 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 49/245 (20%), Positives = 95/245 (38%), Gaps = 6/245 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + ++ A+N++N T GF + + + ++ ++ Sbjct: 1 MDKLLYVAMSGASENAIAQKAHANNLANVSTNGFMRDLEQARSM--PVFGEVMPSRAYAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119 S + G+ + TG ELD A++GD W A+++P G TR + G L SG Sbjct: 59 SERPGTDFSGGAMVETGRELDIAIKGDGWIAVQTPDGGEAYTRSSGMNIDALGVLRDGSG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176 + + + + Q+ EI G S + V + + G Sbjct: 119 LPVMGNGGPIAVPPQQQIEIGADGTISIRSLGESPQVMAQVDRIKLVKPDLKTMEKGPDG 178 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + P + + V V+ GFL+ SN N++ EM ++ L+++F ++ E+ Sbjct: 179 LIHTKSGRPADADATVQVESGFLQASNVNAVEEMTSVLALSRQFELHVKMMKTAEEDDQS 238 Query: 237 AIRNI 241 R + Sbjct: 239 MARVL 243 >gi|120597306|ref|YP_961880.1| flagellar basal-body rod protein FlgF [Shewanella sp. W3-18-1] gi|146294549|ref|YP_001184973.1| flagellar basal-body rod protein FlgF [Shewanella putrefaciens CN-32] gi|120557399|gb|ABM23326.1| flagellar basal-body rod protein FlgF [Shewanella sp. W3-18-1] gi|145566239|gb|ABP77174.1| flagellar basal-body rod protein FlgF [Shewanella putrefaciens CN-32] Length = 244 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 45/242 (18%), Positives = 93/242 (38%), Gaps = 3/242 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M+ + + + + S A+N++N +T GF+ + + V A + + Sbjct: 1 MEKMLYTAASGAVRILEAQSIRANNLANAETAGFKADLERVNAVALAAQGNSLNTRVMAQ 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + S + G TG LD A+ F + G TR G +G ++ G+ Sbjct: 61 TENSGFSHQSGVINPTGRTLDLAIRDRGLFTVAVEGGEAYTRSGALIANAEG-ELTIDGR 119 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ-GFVRRENSGISP 179 + + + + + I G + +G +I +G + +++ G+ Sbjct: 120 PVLGNDGPIVLPEHKDLFIGEDGTVSVLPSEGGIIEEVGRLKLVNPDLALMQKGQDGLLY 179 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + GV V GFLE SN ++ E+ + L+++F L+ + + EA Sbjct: 180 GRDGQLMAQDDGVLVDSGFLESSNVQAVSELIASMDLSRQFEIQVKLMKSA-EKLAEAGN 238 Query: 240 NI 241 + Sbjct: 239 RL 240 >gi|85710164|ref|ZP_01041229.1| flagellar hook protein [Erythrobacter sp. NAP1] gi|85688874|gb|EAQ28878.1| flagellar hook protein [Erythrobacter sp. NAP1] Length = 279 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 44/275 (16%), Positives = 80/275 (29%), Gaps = 39/275 (14%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV--GAIKNDIDQKISFVAS 61 SF L+ E L +++N++N +T GF+ +FS++V G + Sbjct: 2 SFFTSLSGMRNAETDLRVISNNIANAETAGFKKSSAQFSDLVASGGSTDPRTTPGIGATV 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPR--GIILTRDGRFKVTDDGSLVSASG 119 + +G TG LD A+ G + + I TR+G ++ G+L A G Sbjct: 62 SRISQDFGLGQLEQTGRALDIAINGGGFITSANAISGDINFTRNGNLEIVASGTLQDAFG 121 Query: 120 KYPVL------------------------------DMASVPIQIPQKDEIFNVGEKGEIS 149 + V Sbjct: 122 DRIQGFPVDGAGTPTSNVPADITIPTSRTVTDPGTGATQDFQLTSVGFDARGVLTATYSD 181 Query: 150 QKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNA 204 + +A + L + + G + E + + G LE SN Sbjct: 182 GFSEPVAMLSLATFPANGGLRSIGQTKWEATAESGDPEFGQPGVGNFGAIATGTLERSNV 241 Query: 205 NSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + EM ++ + F + ID + Sbjct: 242 DLAEEMVSLLTAQRNFQANARAIDTATAITQTVLN 276 >gi|57505520|ref|ZP_00371447.1| flagellar basal-body rod protein (flgG) [Campylobacter upsaliensis RM3195] gi|57016067|gb|EAL52854.1| flagellar basal-body rod protein (flgG) [Campylobacter upsaliensis RM3195] Length = 270 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 53/268 (19%), Positives = 101/268 (37%), Gaps = 25/268 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDID---- 53 MQ + + +L + +N++N +T G++ V F + K+++ Sbjct: 1 MQNGYYQATGGMVTQFNKLEVITNNLANINTSGYKRDDVVIADFKRIFKETKDELPIENH 60 Query: 54 ----------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDA--WFALESPRGIILT 101 ++Y GS +T LDFA+ + + + LT Sbjct: 61 TKDAARFVNSTIDRVPQISQDYTDFSTGSLKATNNPLDFAMTREDTFYLVQTKNGELRLT 120 Query: 102 RDGRFKVTDDGSLVSASGKYP-----VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156 +DG F++ D+G LV+ G + I I N + G IS G+ A Sbjct: 121 KDGNFQLDDEGYLVNKQGYKVLSSNYFNNPEGAGIIIGNGAVHINADKNGNISVDGEDNA 180 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + + VD + + ++ N + +VK+GF + SN N + EM +I Sbjct: 181 RLFIAQVDDVRALEKDGDNTYKINDLTRIRDLEISNSVKQGFSQGSNVNPVSEMVGLIEA 240 Query: 217 TQKFNSITTLIDEN-EKSMLEAIRNIAS 243 + ++ + + +AI +AS Sbjct: 241 NRMVEMYQKVMTAHMDDLNQDAINKLAS 268 >gi|226315010|ref|YP_002774906.1| flagellar hook-basal body protein [Brevibacillus brevis NBRC 100599] gi|226097960|dbj|BAH46402.1| putative flagellar hook-basal body protein [Brevibacillus brevis NBRC 100599] Length = 276 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 58/276 (21%), Positives = 105/276 (38%), Gaps = 35/276 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 S NI +A ++Q L A+N+SN DT+G++ FSE++ N+ Sbjct: 1 MQSLNISTSAMRGIQQALDNTANNLSNIDTIGYKRRVASFSELLTDSMNEQPATDNQNRN 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF----------ALESPRGI 98 + S G L GS T D +EGD +F + Sbjct: 61 TPMGIRIGSGAHLGMTKLDLGQGSLKQTDVPTDVLIEGDGYFLVTRKIKDANNITVDEES 120 Query: 99 ILTRDGRFKV---TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI 155 TR+G FK+ D G ++ S + + D I P+ + ++ G S G Sbjct: 121 RFTRNGSFKLSYDDDKGYVLHTSSGHILTDENGANIVFPEPVKNISISPDGTFSADGMPA 180 Query: 156 ATM-GLYSVDMSQGFVRRENSGI-------SPNIPPTPLEDLSGVTVKRGFLEDSNANSM 207 G++ V+ + + + +GVT+++G LE SN + Sbjct: 181 PVKIGVWDVENPDQLKQVGENLFDAELAFGAGPQSKYTSAYDNGVTLRQGALESSNVSMT 240 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 EM Q++++ + + + I +++ M + S Sbjct: 241 EEMSQLVNIQRAYQLNSRAIGISDQMMG-IANQLRS 275 >gi|313905150|ref|ZP_07838519.1| fagellar hook-basal body protein [Eubacterium cellulosolvens 6] gi|313470053|gb|EFR65386.1| fagellar hook-basal body protein [Eubacterium cellulosolvens 6] Length = 253 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 51/253 (20%), Positives = 104/253 (41%), Gaps = 13/253 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDIDQK-- 55 M F + + +++L+T+++NM+N +T G++ + F E + +K Sbjct: 1 MYQGFYELTSGLITQQRKLNTISNNMANVETAGYKRDTMTVSTFQEEMLIRTGQTAKKNP 60 Query: 56 ------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109 A+ + Y GSF T + DFA+ GD +F +++P GI TR+G F V Sbjct: 61 TDLAVTTPIAAADQTYTDFTQGSFDQTDGKYDFAISGDGFFTIQTPNGIQYTRNGAFSVN 120 Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169 G L + V + + + G + G V + + + + Sbjct: 121 AQGILCLDNIGTVVGANGGTIRITNENFVVDDYGRIMSAAGDGTVYGQLRITGFEDTGTL 180 Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 + +N + P + V G+LE SNA+ + +M +M+ + S ++ Sbjct: 181 HKEDNGMF--SAPGGGQDLTGRTRVFNGYLEASNADMIGQMTEMMSSQRALQSAAQMLKM 238 Query: 230 NEKSMLEAIRNIA 242 ++ + +A ++ Sbjct: 239 YDQVLSKASSDVG 251 >gi|315637965|ref|ZP_07893151.1| flagellar basal-body rod protein [Campylobacter upsaliensis JV21] gi|315482000|gb|EFU72618.1| flagellar basal-body rod protein [Campylobacter upsaliensis JV21] Length = 270 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 52/268 (19%), Positives = 101/268 (37%), Gaps = 25/268 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDID---- 53 MQ + + +L + +N++N +T G++ V F + K+++ Sbjct: 1 MQNGYYQATGGMVTQFNKLEVITNNLANINTSGYKRDDVVIADFKRIFKETKDELPIENH 60 Query: 54 ----------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDA--WFALESPRGIILT 101 ++Y GS +T LDFA+ + + + LT Sbjct: 61 TKDAARFVNSTIDRVPQISQDYTDFSTGSLKATNNPLDFAMTREDTFYLVQTKNGELRLT 120 Query: 102 RDGRFKVTDDGSLVSASGKYP-----VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156 +DG F++ D+G LV+ G + I I N + G IS G+ A Sbjct: 121 KDGNFQLDDEGYLVNKQGYKVLSSNYFNNPEGAGIIIGNGAVHINADKNGNISVDGEDNA 180 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + + VD + + ++ + + +VK+GF + SN N + EM +I Sbjct: 181 RLFIAQVDDVRALEKDGDNTYKIDDLTRIRDLEISNSVKQGFSQGSNVNPVSEMVGLIEA 240 Query: 217 TQKFNSITTLIDEN-EKSMLEAIRNIAS 243 + ++ + + +AI +AS Sbjct: 241 NRMVEMYQKVMTAHMDDLNQDAINKLAS 268 >gi|283953937|ref|ZP_06371466.1| putative flagellar basal-body rod protein [Campylobacter jejuni subsp. jejuni 414] gi|283794542|gb|EFC33282.1| putative flagellar basal-body rod protein [Campylobacter jejuni subsp. jejuni 414] Length = 270 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 50/268 (18%), Positives = 103/268 (38%), Gaps = 25/268 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDID---- 53 MQ + + +L + +N++N +T G++ V F + ++++ Sbjct: 1 MQNGYYQATGGMVTQFNKLDVITNNLANINTSGYKRDDVVIADFKRIFKETQDELPIENH 60 Query: 54 ----------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILT 101 +EY +GS +T LD A+ + F + LT Sbjct: 61 TRDASRFVNTTIDGIPQVSQEYTDFSLGSLKATNNPLDLAMTREDAFYLVQTKDGEVRLT 120 Query: 102 RDGRFKVTDDGSLVSASGKYP-----VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156 +DG F++ D+G LV+ G + + I+IP +V + G I G A Sbjct: 121 KDGNFQLDDEGYLVNKQGYKVLSSNYFNNPQNAGIRIPNGAIQISVDKNGGIEVDGVQNA 180 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + + VD + + ++ + + + +++GF + SN N + EM +I Sbjct: 181 RLFVAQVDDIRALQKDGDNVYKIDDLTRIRDLENSNAIRQGFSQGSNVNPVTEMVGLIEA 240 Query: 217 TQKFNSITTLIDEN-EKSMLEAIRNIAS 243 + ++ + + EAI +A+ Sbjct: 241 NRMVEMYQKVMTAHMDDLNQEAINKLAA 268 >gi|149908758|ref|ZP_01897419.1| Hypothetical FlgF flagellar basal-body rod protein [Moritella sp. PE36] gi|149808300|gb|EDM68239.1| Hypothetical FlgF flagellar basal-body rod protein [Moritella sp. PE36] Length = 240 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 46/243 (18%), Positives = 90/243 (37%), Gaps = 5/243 (2%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 L+ + ++ A+N++N +T GF+ V I+ + S Sbjct: 1 MKLLYTALSGAEQSQTAMNIRANNLANVNTNGFKADID--RAVAYKIEGAGYETRYLSQS 58 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGK 120 + G TG LD A++G+ + A+ +P TR G + +G S +G Sbjct: 59 AASGTNFSAGKLEKTGRSLDIAIQGEGYIAVRTPGGAEAYTRAGSMTLDSEGRA-SINGN 117 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 V + A + Q EI + G I+ G + + + G + + G+ Sbjct: 118 AVVANGAQLTFPEYQSIEIGSDGTVTAITLGGAQVQVGQIKLIKPEAGSMVKGQDGLLHL 177 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 V + GFLE SN N++ E+ + + ++F ++ + + Sbjct: 178 KAGAVGNRAEDVALVSGFLEGSNVNAVTELVSSMMVNRQFELQIKMMKTADTLAQKG-NQ 236 Query: 241 IAS 243 + S Sbjct: 237 LIS 239 >gi|310644367|ref|YP_003949126.1| flagellar basal body rod protein [Paenibacillus polymyxa SC2] gi|309249318|gb|ADO58885.1| Flagellar basal body rod protein [Paenibacillus polymyxa SC2] Length = 294 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 48/292 (16%), Positives = 102/292 (34%), Gaps = 50/292 (17%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTI---KVKFSEVVGAIKNDIDQKIS 57 M A + ++R TV N++N +T G++ + F E++ ++ Sbjct: 1 MLRGLYTAAAGMMTQQRRHDTVTQNIANMNTTGYKQENSVQRSFPEMLISMTGGNPDNPD 60 Query: 58 --------FVASGKEYLSKEVGSFISTGTELDFALEGDA--------------------- 88 V + + G+ +G DFAL+ + Sbjct: 61 RTVGKLNTGVFAEESLSPYIQGALKDSGQTTDFALQSNINVNDPATGRPMAFDQAGKFIN 120 Query: 89 ------------WFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQK 136 + ++ + TRDG F+V G+L+S++G + + Sbjct: 121 ANGEVTYRPEAFFTVRDNNGNVRYTRDGHFQVNGTGALLSSTGSAVLDTNGNPIQLTGSV 180 Query: 137 DEIFNVGEKGEISQKGKVI--ATMGLYSVDMSQGFVRRENSGISPN----IPPTPLEDLS 190 + + + + T+G+ +D VR N N + Sbjct: 181 SALKVNERGQLVDSQSNQLLGTTLGISVIDRPYQLVREGNGNFRLNDTDGATARMMTAND 240 Query: 191 GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 V+V++G+LE SN ++ M M+ + + + +I +KS+ +A+ + Sbjct: 241 TVSVRQGYLEVSNVDAAQSMVDMMAALRAYEANQKVIQFYDKSLDKAVNEVG 292 >gi|308071139|ref|YP_003872744.1| flagellar basal body rod protein [Paenibacillus polymyxa E681] gi|305860418|gb|ADM72206.1| Flagellar basal body rod protein [Paenibacillus polymyxa E681] Length = 294 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 49/292 (16%), Positives = 106/292 (36%), Gaps = 50/292 (17%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTI---KVKFSEVVGAIKNDIDQKI- 56 M A + ++R TV N++N +T G++ + F E++ ++ Sbjct: 1 MLRGLYTAAAGLMTQQRRHDTVTQNIANMNTTGYKQENSVQRSFPEMLISMTGGNPDNPG 60 Query: 57 -------SFVASGKEYLSKEVGSFISTGTELDFALEGDA--------------------- 88 + V + + G+ +G DFA++ + Sbjct: 61 RTVGKLNTGVFAEESLSPYIQGALKDSGQATDFAIQSNINVNDPATGQPMAFDQAGKFIN 120 Query: 89 ------------WFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQI--P 134 + +S + TRDG F+V G+L+S++G + + Sbjct: 121 ANGEVTYRPEAFFTVRDSNGNVRYTRDGHFQVNGAGALLSSTGSAVLDTNGNPIQLTGAV 180 Query: 135 QKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN----IPPTPLEDLS 190 + ++ GE + + T+G+ +D +R N N + Sbjct: 181 SELKVNERGELVDSQSNQTLGTTLGISVIDRPYQLIREGNGNFRLNDTDGATARMMTAND 240 Query: 191 GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 V+V++G+LE SN ++ M M+ + + + +I +KS+ +A+ + Sbjct: 241 AVSVRQGYLEVSNVDASQSMVDMMAALRAYEANQKVIQFYDKSLDKAVNEVG 292 >gi|157959901|ref|YP_001499935.1| flagellar basal-body rod protein FlgF [Shewanella pealeana ATCC 700345] gi|157844901|gb|ABV85400.1| flagellar basal-body rod protein FlgF [Shewanella pealeana ATCC 700345] Length = 241 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 49/239 (20%), Positives = 92/239 (38%), Gaps = 3/239 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + + + + A+N++N DT GF+ + + V A D Q + Sbjct: 1 MLYTAASGASRVMEAQAIRANNLANADTTGFKADLERVNAKVIAPIGDSLQTRVLAQTQG 60 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPV 123 S++ G+ TG LD A+ F++ + G TR G G ++ G+ Sbjct: 61 SGFSRQSGTLNPTGRTLDLAINNAGLFSVMTAEGEGYTRAGAMTADATG-QLTLDGRPVA 119 Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ-GFVRRENSGISPNIP 182 + + ++ I + G I+ VI +G + + + G+ Sbjct: 120 GLAGPIVLPEYRELFIGDDGRINIIADADGVIEEVGQLKLVNPDIALMSKGLDGLLYPQD 179 Query: 183 PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 PL VTV GFLE SN ++ E+ + L+++F L+ + + EA + Sbjct: 180 RQPLPASEEVTVSSGFLEASNVQAVGELIAAMDLSRQFEVQVKLMKSA-EKLAEAGNRL 237 >gi|224370761|ref|YP_002604925.1| FlgF [Desulfobacterium autotrophicum HRM2] gi|223693478|gb|ACN16761.1| FlgF [Desulfobacterium autotrophicum HRM2] Length = 226 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 49/228 (21%), Positives = 88/228 (38%), Gaps = 19/228 (8%) Query: 15 LEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFI 74 E++L +++++N DT GF+ V F + A N Sbjct: 15 QERKLEVTSNHLANVDTAGFKKDVVSFDSMFKAALN---------------TDLTQAGVK 59 Query: 75 STGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIP 134 TG LD AL + +F +E+P G+ TR+G F + D LV +G + I Sbjct: 60 HTGNPLDLALSDEGFFKVETPSGVRYTRNGVFSLNADNVLVDQNGDAVL----GQNGPIT 115 Query: 135 QKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTV 194 + GEI G VI + + + D + + + V V Sbjct: 116 ITAGTVEINGTGEIRGDGAVIDQLDIVTFDTLDLLQKEGANNFVFTGDTNLEVAPANVGV 175 Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 +G LE S+ ++ EM MI + + + ++ ++ +AI ++ Sbjct: 176 VQGSLELSSVKAVEEMVNMIDHHRMYETFQKMMMTFDEVDDKAINSLG 223 >gi|85859195|ref|YP_461397.1| flagellar basal-body rod protein [Syntrophus aciditrophicus SB] gi|85722286|gb|ABC77229.1| flagellar basal-body rod protein [Syntrophus aciditrophicus SB] Length = 255 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 48/227 (21%), Positives = 85/227 (37%), Gaps = 8/227 (3%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIS 75 +L A+N++N T GF+ V+F + + G+ Sbjct: 34 MAKLDCSANNIANVSTPGFK---VEFLNYLMRDSGRSSNDKAPSYDELLTRDYSSGALQR 90 Query: 76 TGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQ 135 T L+ AL G+ +F +++ +G+ TR G F + LV+ SG + I Sbjct: 91 TDNPLEVALLGEGFFIIQTAKGVAYTRRGDFTLNMKRELVTKSGDPVL----GKTGTIVL 146 Query: 136 KDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVK 195 E + E G + + + + S + GI + ++ V Sbjct: 147 NGEDVRIDESGNVHIGENQVGQLKIVSFKNPEVLTSS-GEGIFRDEGKGIFQENFTPKVV 205 Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G LE SN +++ EM QMI L + F + LI ++ + I Sbjct: 206 YGSLELSNVSAIKEMIQMIDLQRTFETYQKLIHSIDEQDKLSAGRIG 252 >gi|94495411|ref|ZP_01301991.1| flagellar basal-body rod protein FlgG [Sphingomonas sp. SKA58] gi|94424799|gb|EAT09820.1| flagellar basal-body rod protein FlgG [Sphingomonas sp. SKA58] Length = 281 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 44/277 (15%), Positives = 93/277 (33%), Gaps = 41/277 (14%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--ISFVAS 61 SF + L+ + LS +++N++N ++ F+ K +F ++ A + V Sbjct: 2 SFYVSLSGLKGAQADLSAISNNVANVNSTAFKKSKAQFGDIFAASPMQTTHQVAGQGVRV 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG- 119 G+ +T LD A+ G+ +F ++ I TR+G F V +D V +G Sbjct: 62 QGITQQFTQGTIETTDKTLDLAITGEGFFTVKGEDGTISYTRNGAFSVDNDRFAVDTTGS 121 Query: 120 ----------------------KYPVLDMASVPIQIPQKDEIFNVGEKG----------E 147 L +P + + + G Sbjct: 122 RIQVFAVDPETGDLTTPPTSATGPGDLTDLQIPTTYNNEADGAQLTSVGVSKEGLVSAIY 181 Query: 148 ISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDS 202 + + + S + +G ++ ++ + + +V G LE S Sbjct: 182 ADGSTVYLGQVAMASFNSLEGLRQQGDAHWTSTVESGNPILGTANQGMFGSVNSGSLERS 241 Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 N + E+ Q+I + F + + I+ + Sbjct: 242 NVDITDELVQLIAAQRNFQANSKAIEAANTLTTTIVN 278 >gi|310644366|ref|YP_003949125.1| fagellar hook-basal body protein [Paenibacillus polymyxa SC2] gi|309249317|gb|ADO58884.1| Fagellar hook-basal body protein [Paenibacillus polymyxa SC2] Length = 275 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 53/276 (19%), Positives = 102/276 (36%), Gaps = 34/276 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S + + +++QRL +ADN++N +TVG+++ + F +V+ ++ Sbjct: 1 MNNSMIGAMVSMASVQQRLDLIADNIANVNTVGYKSKQGSFEDVLANVQQQPSTYLQNGR 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107 V + + E G TG D A++G+A F ++ TRDG F Sbjct: 61 AMPLGYNLGYGVKTTAIMKNMEQGPLKETGLPTDLAIQGNALFEIQGNGQKAWTRDGGFH 120 Query: 108 V------TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL- 160 + L +A G + + N + I G T+G Sbjct: 121 FIPDPNDNETMMLTTAEGYSVLDNNDIPVTAPAGSKVAINSDGELLIRANGTGAPTVGQR 180 Query: 161 ---YSVDMSQGFVRRENSGISPN----------IPPTPLEDLSGVTVKRGFLEDSNANSM 207 V +G +R+++ + V+V+ G+LE+SN N Sbjct: 181 IKLMDVQRPEGLQQRDDNLFVLANGVTEADVFGAAGVAGAVPTDVSVRSGYLEESNVNLA 240 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 EM M+ + + + + ++ M N+ + Sbjct: 241 GEMTDMMQVQRMYQMAARALTSSDTMM-NLANNLRA 275 >gi|157164118|ref|YP_001467097.1| flagellar basal-body rod protein [Campylobacter concisus 13826] gi|112799948|gb|EAT97292.1| flagellar basal-body rod protein [Campylobacter concisus 13826] Length = 269 Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats. Identities = 44/266 (16%), Positives = 103/266 (38%), Gaps = 24/266 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDID---- 53 MQ + A + RL+ +++N++N +T+G++ V F+ + ++++ Sbjct: 1 MQNGYYQATAGMVTQFNRLNVISNNLANVNTIGYKRNDVVIGDFARIFKETQDELPLKNH 60 Query: 54 ----------QKISFVASGKEYLSKEVGSFISTGTELDFALEG-DAWFALESPRGIILTR 102 +EY G F + LDFA++ DA+F +++P G+ L++ Sbjct: 61 TKDGAKFLNRTLDRVPQVSEEYTDFSAGGFKYSSNTLDFAIKREDAFFLVDTPNGVKLSK 120 Query: 103 DGRFKVTDDGSLVSASGKYPVLDMA-----SVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157 +G F + DG +V+ G + + E+ + G + + Sbjct: 121 NGSFSLDGDGYIVTKEGYRVLPSGYEAQNPGQRGIQVPQGEVLTGDKNGNLYSNNNQFSK 180 Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217 + + + ++ E +V +G+ + SN N + EM +I Sbjct: 181 FYIAQPREIRDLKKVGDNLFETRNFDDITELDEADSVMQGYAQMSNVNPVLEMVGLIETQ 240 Query: 218 QKFNSITTLIDENE-KSMLEAIRNIA 242 + + ++ + +A++ +A Sbjct: 241 RLVDMYQKVMTSHMTDLNQDAVQKLA 266 >gi|330967092|gb|EGH67352.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv. actinidiae str. M302091] Length = 246 Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats. Identities = 49/245 (20%), Positives = 94/245 (38%), Gaps = 6/245 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + ++ A+N++N T GF + + + ++ ++ Sbjct: 1 MDKLLYVAMSGASENAIAQKAHANNLANVSTNGFMRDLEQARSM--PVFGEVMPSRAYAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119 S + G+ + TG ELD A++GD W A+++P G TR + G L SG Sbjct: 59 SERPGTDFSGGAMVETGRELDIAIKGDGWIAVQTPDGGEAYTRSSGMNIDALGVLRDGSG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176 + + + + Q+ EI G S + V + + G Sbjct: 119 LPVMGNGGPIAVPPQQQIEIGADGTISIRSLGESPQVMAQVDRIKLVKPDLKTMEKGPDG 178 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + P + V V+ GFL+ SN N++ EM ++ L+++F ++ E+ Sbjct: 179 LIHTKSGQPAAADATVQVESGFLQASNVNAVEEMTSVLALSRQFELHVKMMKTAEEDDQS 238 Query: 237 AIRNI 241 R + Sbjct: 239 MARVL 243 >gi|315929130|gb|EFV08357.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 305] Length = 270 Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats. Identities = 50/267 (18%), Positives = 102/267 (38%), Gaps = 25/267 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDID---- 53 MQ + + +L + +N++N +T G++ V F + ++++ Sbjct: 1 MQNGYYQATGGMVTQFNKLDVITNNLANINTSGYKRDDVVIADFKRIFKETQDELPIENH 60 Query: 54 ----------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILT 101 +EY +GS +T LD A+ + F + LT Sbjct: 61 TRDASRFVNTTIDGIPQVSQEYTDFSLGSLKATNNPLDLAMTREDAFYLVQTKDGEVRLT 120 Query: 102 RDGRFKVTDDGSLVSASGKYP-----VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156 +DG F++ D+G LV+ G + + I+IP +V + G I G A Sbjct: 121 KDGNFQLDDEGYLVNKQGYKVLSSDYFNNPQNAGIRIPNGAVQISVDKNGSIEVDGAQNA 180 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + + VD + + ++ + + + +++GF + SN N + EM +I Sbjct: 181 RLFVAQVDDIRALQKDGDNVYKIDDLTRIRDLKNSNAIRQGFSQGSNVNPVTEMVGLIEA 240 Query: 217 TQKFNSITTLIDEN-EKSMLEAIRNIA 242 + ++ + + EAI +A Sbjct: 241 NRMVEMYQKVMTAHMDDLNQEAINKLA 267 >gi|195953934|ref|YP_002122224.1| flagellar basal body rod protein [Hydrogenobaculum sp. Y04AAS1] gi|195933546|gb|ACG58246.1| flagellar basal body rod protein [Hydrogenobaculum sp. Y04AAS1] Length = 253 Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats. Identities = 49/253 (19%), Positives = 93/253 (36%), Gaps = 22/253 (8%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV--------GAIKNDIDQKI 56 + + ++RL VA+N++N DT GF+ + G ++ Sbjct: 8 MYVLASGMSLEQRRLDVVANNIANADTPGFKKDFLSALAYYTPDATKEPGNAPDNPSNNY 67 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLV 115 + K Y + G T LD A+ G +F + + + I R G F++ +G LV Sbjct: 68 VYPIMEKIYTNYTEGPIKKTDNPLDLAINGKGFFKVMNDKGEIFYQRRGDFQLDKNGYLV 127 Query: 116 SASGKYPVLDMASVPI------QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169 + G + I + ++ + T+GL + + Sbjct: 128 NHYGMKVLGPKNQPIQIPPIATSIHISPQGNVFITTQGTNETPSQVGTIGLVDLTNPE-- 185 Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 + + + TP + T+ +G LE SN N + EM Q+I L++ + L+ Sbjct: 186 --KAGNDLYTAQNATP---DTTSTLIQGALEGSNVNPVREMVQLIDLSKAYQVYGNLVKG 240 Query: 230 NEKSMLEAIRNIA 242 E + + N Sbjct: 241 LETTQSKVSNNFG 253 >gi|251778946|ref|ZP_04821866.1| flagellar hook-basal body complex protein FlhP [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243083261|gb|EES49151.1| flagellar hook-basal body complex protein FlhP [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 256 Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats. Identities = 48/257 (18%), Positives = 103/257 (40%), Gaps = 17/257 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M F + A +++L +++++ NT T G+++ V+FS+++ + Sbjct: 1 MFNIFANAQSGMSAYQEKLDYLSNDLVNTSTTGYKSTDVQFSDLLTESLDRKGTPLVNKD 60 Query: 56 ---ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDD 111 + V G +Y G+ ++TG + D A++G +FA I TRDG K+ + Sbjct: 61 AINGTGVKLGMDYRKDTQGNLLTTGVKTDIAIDGKGYFASAQNDGTIAYTRDGNLKIDSN 120 Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV------IATMGLYSVDM 165 G+LV A G + + K ++ GE KV + + +++ Sbjct: 121 GTLVDARGNKIYIQYEGGMSEGNPKLSSEDISIDGEGGISTKVDGQYVKVGQIPVFTAVG 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225 + F+ + + + +++G LE SN ++ +I + F + Sbjct: 181 DKAFIA-IGNNYFVASDDAQIALSNDYNIEQGMLEGSNVDTSEIFTDIISTQRAFQLSSK 239 Query: 226 LIDENEKSMLEAIRNIA 242 I ++ I ++ Sbjct: 240 GITTADEV-WGMINSMR 255 >gi|296135672|ref|YP_003642914.1| flagellar basal-body rod protein FlgF [Thiomonas intermedia K12] gi|295795794|gb|ADG30584.1| flagellar basal-body rod protein FlgF [Thiomonas intermedia K12] Length = 245 Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats. Identities = 49/246 (19%), Positives = 102/246 (41%), Gaps = 9/246 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M T I A+ ++ + +N++N +T G+R + +F + + + ++ Sbjct: 1 MDT-LWIAATGARAVLRQQAVTTNNLANVNTTGYRGEQAQFRAL--PVYGNALPTSAYTT 57 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + G TG LD A+ G W A+++P TR+G +V+ G L ++ G Sbjct: 58 VQGNSANLQEGPINHTGRNLDVAIRGSGWIAVQAPNGDTAYTRNGDLQVSASGILSTSDG 117 Query: 120 KYPVL----DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 + + ++ P++ Q + SQ ++ + V+ ++R Sbjct: 118 RPVLGQSGAPISVPPLESVQIGADGTISGVPVGSQPNALVVINRIQLVNPPPAQMQRGAD 177 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 G+ + P V + G LE SN N + M Q++ T+ F T L+ +++ Sbjct: 178 GLFRDTQG-PAPADGNVQLAVGALEGSNVNPVQAMIQILDNTRAFEMQTKLMQTVDQNHQ 236 Query: 236 EAIRNI 241 A + + Sbjct: 237 AATQLL 242 >gi|188589304|ref|YP_001920228.1| flagellar basal body rod protein FlgG [Clostridium botulinum E3 str. Alaska E43] gi|188499585|gb|ACD52721.1| flagellar hook-basal body complex protein FlhP [Clostridium botulinum E3 str. Alaska E43] Length = 256 Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats. Identities = 47/248 (18%), Positives = 100/248 (40%), Gaps = 16/248 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M F + A +++L +++++ NT T G+++ V+FS+++ + Sbjct: 1 MFNIFANAQSGMNAYQEKLDYLSNDLVNTSTTGYKSTDVQFSDLLTESLDRKGTPLVNKD 60 Query: 56 ---ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDD 111 + V G +Y G+ ++TG + D A++G +FA I TRDG K+ + Sbjct: 61 AINGTGVKLGMDYRKDTQGNLLTTGVKTDIAIDGKGYFASAQNDGTIAYTRDGNLKIDSN 120 Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV------IATMGLYSVDM 165 G+LV A G + + K ++ GE KV + + +++ Sbjct: 121 GTLVDARGNKIYIQYEGGMSEGNPKLSSEDISIDGEGGISTKVDGQYVKVGQIPVFTAVG 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225 + F+ + + + +++G LE SN ++ +I + F + Sbjct: 181 DKAFIA-IGNNYFVASDDAQIALSNDYNIEQGMLEGSNVDTAEIFTDIISTQRAFQLSSK 239 Query: 226 LIDENEKS 233 I ++ Sbjct: 240 GITTADEV 247 >gi|226950067|ref|YP_002805158.1| flagellar hook protein FlgE [Clostridium botulinum A2 str. Kyoto] gi|226841875|gb|ACO84541.1| flagellar hook protein FlgE [Clostridium botulinum A2 str. Kyoto] Length = 334 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 44/331 (13%), Positives = 92/331 (27%), Gaps = 92/331 (27%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50 M S G++ A + RL V +N++N +T F++ ++F +++ + Sbjct: 1 MLRSMYSGISGLKAQQTRLDIVGNNIANANTTAFKSQSIRFQDMLSQNMSSATGPSANLG 60 Query: 51 --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP------------- 95 + Q V + G+ +TG LD A++G +F + Sbjct: 61 GTNPRQVGLGVQVAGIFTKFTTGNMQTTGRNLDMAIDGPGFFIVGKGKFSDTTTISTSGD 120 Query: 96 ---------RGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG 146 + T+DG F + +DGSL+++ G + Sbjct: 121 NEGAINGGTMEVSFTKDGSFNLDEDGSLITSDGLRIMGYAIESADITKDATTGKIKVGFK 180 Query: 147 EISQKGKVI---------------------------------------------ATMGLY 161 + K + + + Sbjct: 181 NADEDPKAVTDKLVPLAIPDEIEKGSEKVRVQSFTIDKDGLIVASLVDGTSAALGQIAMA 240 Query: 162 SVDMSQGFVRRENSGI-------------SPNIPPTPLEDLSGVTVKRGFLEDSNANSMY 208 S G + + + G +E SN + Sbjct: 241 SFKNEGGLEKMGKNLYRNSANSGEAIIRSGRGTDADKDNSKGYGDMLNGMIEMSNVDLAE 300 Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E +MI + F + +I ++ + E + Sbjct: 301 EFTEMIVANRAFQACGKMITTGDEILQELVN 331 >gi|253702499|ref|YP_003023688.1| hypothetical protein GM21_3913 [Geobacter sp. M21] gi|251777349|gb|ACT19930.1| protein of unknown function DUF1078 domain protein [Geobacter sp. M21] Length = 294 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 41/290 (14%), Positives = 92/290 (31%), Gaps = 50/290 (17%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 ++ G++ L + ++ + +N+SN +T+G++ + FS+++ + Q V Sbjct: 5 SALYTGVSGLLQNGEAMNVIGNNISNVNTIGYKGARTLFSDMLSQNVGNNSQIGKGVQMQ 64 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWF---------ALESPRGIILTRDGRFKVTDDGS 113 GS S+ D A++G+++F + L+R G F+ + Sbjct: 65 VVQNVFSQGSTQSSENVTDLAIQGNSFFALKPSTAAAPVARQSDAFLSRAGAFQTDSNLY 124 Query: 114 LVSASGKYPVLDMASVPIQ----------------IPQKDEIFNVGEKGEISQKGKVIAT 157 LV+ G + + I I + G Sbjct: 125 LVNPDGYQVLDTAGNPIQFLDTKAAPTTDFGKVLSIDNTGLITYLATDGITQNYYSASGA 184 Query: 158 MGLY---------------SVDMSQGFVRRENSGISPNIPP----------TPLEDLSGV 192 +G+ + + G + S + Sbjct: 185 VGVATTPAAATAAEKIAVVTAADTTGLKKVGGSLYQATTDAGVSTAAFSQAANKPNGVSE 244 Query: 193 TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 T+ LE S + E +MI + +++ + I +++ E + I Sbjct: 245 TILSNTLEQSTVDLANEFVKMITTQRAYSANSKTITTSDQMTQEVLNLIR 294 >gi|332187894|ref|ZP_08389627.1| flagellar hook-basal body s family protein [Sphingomonas sp. S17] gi|332012055|gb|EGI54127.1| flagellar hook-basal body s family protein [Sphingomonas sp. S17] Length = 251 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 48/245 (19%), Positives = 74/245 (30%), Gaps = 12/245 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + S +A+NM+N T+GFR +V F + + A Sbjct: 1 MDKLVYTAATGMRSHMAAQSAIANNMANASTIGFRADRVVFDRIDLKGGGAAFEARMPTA 60 Query: 61 SGKEYLSKEVGSFISTGTELDFAL-EGDAWFALESPR-GIILTRDGRFKVTDDGSLVSAS 118 + G+ TG LD A+ AW A+++P TR G +VT G L + Sbjct: 61 EEVTDADRAPGTVQHTGNPLDVAIATSSAWLAVQAPDGSEAYTRRGDLEVTASGVLQTGD 120 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF-------VR 171 G + V G +S V Sbjct: 121 GYPVIG---QNGPITVPPYNSLAVSPDGTVSIIPLGAGPDTQAQVIDRMKLADARVSQTV 177 Query: 172 RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 + + L TV+ G LE SN N + MI + + L+ E + Sbjct: 178 KGLDNLLRVKGGGALPQDMDATVQSGALEGSNVNMAQTLVDMIENQRSYEVQANLMKEAK 237 Query: 232 KSMLE 236 Sbjct: 238 SMDEN 242 >gi|330875985|gb|EGH10134.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 246 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 49/245 (20%), Positives = 94/245 (38%), Gaps = 6/245 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + ++ A+N++N T GF + + + ++ ++ Sbjct: 1 MDKLLYVAMSGASENAIAQKAHANNLANVSTNGFMRDLEQARSM--PVFGEVMPSRAYAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119 S + G+ + TG ELD A++GD W A+++P G TR + G L SG Sbjct: 59 SERPGTDFSGGAMVQTGRELDIAIKGDGWIAVQTPDGGEAYTRSSGMNIDALGVLRDGSG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176 + + + + Q+ EI G S + V + + G Sbjct: 119 LPVMGNGGPIAVPPQQQIEIGADGTISIRSLGESPQVMAQVDRIKLVKPDLKTMEKGPDG 178 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + P + V V+ GFL+ SN N++ EM ++ L+++F ++ E+ Sbjct: 179 LIHTKSGQPAAADATVQVESGFLQASNVNAVEEMTSVLALSRQFELHVKMMKTAEEDDQS 238 Query: 237 AIRNI 241 R + Sbjct: 239 MARVL 243 >gi|153952418|ref|YP_001398358.1| flagellar basal-body rod protein [Campylobacter jejuni subsp. doylei 269.97] gi|152939864|gb|ABS44605.1| flagellar basal-body rod protein [Campylobacter jejuni subsp. doylei 269.97] Length = 270 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 102/268 (38%), Gaps = 25/268 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDID---- 53 MQ + + +L + +N++N +T G++ V F + ++++ Sbjct: 1 MQNGYYQATGGMVTQFNKLDVITNNLANINTSGYKRDDVVIADFKRIFKETQDELPIENR 60 Query: 54 ----------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDA--WFALESPRGIILT 101 +EY +GS +T LD A+ + + + LT Sbjct: 61 TRDASRFVNTTIDGIPQVSQEYTDFSLGSLKATNNPLDLAMTREDTFYLVQTKDGEVRLT 120 Query: 102 RDGRFKVTDDGSLVSASGKYP-----VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156 +DG F++ D+G LV+ G + + I+IP +V + G I G A Sbjct: 121 KDGNFQLDDEGYLVNKQGYKVLSSDYFNNPQNAGIRIPNGAVQISVDKNGSIEVDGAQNA 180 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + + VD + + ++ + + +++GF + SN N + EM +I Sbjct: 181 RLFVAQVDDIRALQKDGDNVYKIDDLTRIRYLENSNAIRQGFSQGSNVNPVTEMVGLIEA 240 Query: 217 TQKFNSITTLIDEN-EKSMLEAIRNIAS 243 + ++ + + EAI +A+ Sbjct: 241 NRMVEMYQKVMTAHMDDLNQEAINKLAA 268 >gi|300854216|ref|YP_003779200.1| putative flagellar hook protein FlgE [Clostridium ljungdahlii DSM 13528] gi|300434331|gb|ADK14098.1| predicted flagellar hook protein FlgE [Clostridium ljungdahlii DSM 13528] Length = 323 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 47/320 (14%), Positives = 98/320 (30%), Gaps = 81/320 (25%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S ++ +Q+L+ +DN++N+ T GF++ + F +++ +D Sbjct: 1 MLPSLYTAISGLRVNQQKLNVTSDNIANSSTTGFKSKNMIFEDMLSQNLSDPSAPVDGGL 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELD-FALEGDAWFALESPRGI-------- 98 Q V GS +T LD A +G ++F + + Sbjct: 61 GGINARQSGLGVKVAGINTDFTAGSSQTTNRSLDFMANKGGSYFVVSPDGDVSNANGGNA 120 Query: 99 --------ILTRDGRFKVTDDGSLVSASGKYPVLD------------------------- 125 TRDG F + + G+L++ G + + Sbjct: 121 SDTTSKSYYYTRDGAFTLDEAGNLLTQDGYHVMGYNVDDKTGAITDTASGTDTSNIVPPK 180 Query: 126 --------------MASVPIQIPQKDEIFNVGEKGEISQK--------GKVIATMGLYSV 163 + Q +E G + + + L S Sbjct: 181 CLQIAQYYTKDGAVDTAPQDQTTADNEKVTSWSVGPSTGIITVKTALGSHQVGRIALASF 240 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G V+ + + + ++ +G LE SN + + MI T+ Sbjct: 241 QNEGGLVKDGGNLYESSPNSGDAAYGTPGTNYGSLNQGALEMSNVDLAQQFTDMIVATRA 300 Query: 220 FNSITTLIDENEKSMLEAIR 239 F + +I ++ + + + Sbjct: 301 FQANGKIITTDDTILEDLVN 320 >gi|49089306|gb|AAT51668.1| PA1081 [synthetic construct] Length = 250 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 49/239 (20%), Positives = 89/239 (37%), Gaps = 9/239 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + ++ + A+N++N T GFR + + + D F Sbjct: 1 MDKMLYVSMSGASQNTLAMRAHANNLANISTSGFRRDFEQARSM--QVSGDSFPARVFAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 S + GS TG ELD A++GD + A+++P R + G L + G Sbjct: 59 SERPGTDFSHGSLQETGNELDIAIDGDGFVAVQAPDGSEAYVRTAGMHIDALGMLRTGDG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEIS---QKGKVIATMGLYSVDMSQGFVRRENSG 176 + + + + +K EI G + V + V+ + + + G Sbjct: 119 LPVLGNGGPIAVPPEEKVEIGQDGTISIRALGENPNVVAVVDRIKLVNPNLKQMEKGTDG 178 Query: 177 ---ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 P + V V GFLE SN N++ EM ++ L+++F ++ E Sbjct: 179 LLHYKPQPGEQAPLADANVKVVSGFLESSNVNAVEEMTAILSLSRQFELHVKMMRTAED 237 >gi|330961200|gb|EGH61460.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv. maculicola str. ES4326] Length = 246 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 49/245 (20%), Positives = 95/245 (38%), Gaps = 6/245 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + ++ A+N++N T GF + + + ++ ++ Sbjct: 1 MDKLLYVAMSGASENAIAQKAHANNLANVSTNGFMRDLEQARSM--PVFGEVMPSRAYAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119 S + G+ + TG ELD A++GD W A+++P G TR + G L SG Sbjct: 59 SERPGTDFSGGAMVQTGRELDIAVKGDGWIAVQTPDGGEAYTRSSGMNIDALGVLRDGSG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176 + + + + Q+ EI G S + V + + G Sbjct: 119 LPVMGNGGPIAVPPQQQIEIGADGTISIRSLGESPQVMAQVDRIKLVKPDLKTMEKGPDG 178 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + P + + V V+ GFL+ SN N++ EM ++ L+++F ++ E+ Sbjct: 179 LIHTKTGRPADVDATVQVESGFLQASNVNAVEEMTSVLALSRQFELHVKMMKTAEEDDQS 238 Query: 237 AIRNI 241 R + Sbjct: 239 MARVL 243 >gi|52787553|ref|YP_093382.1| FlhP [Bacillus licheniformis ATCC 14580] gi|163119681|ref|YP_080952.2| flagellar hook-basal body protein [Bacillus licheniformis ATCC 14580] gi|52350055|gb|AAU42689.1| FlhP [Bacillus licheniformis ATCC 14580] gi|145903191|gb|AAU25314.2| flagellar hook-basal body protein [Bacillus licheniformis ATCC 14580] Length = 275 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 53/276 (19%), Positives = 103/276 (37%), Gaps = 35/276 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M S L++++ ++ N++NTDT G++ FSE++ +++K + VA Sbjct: 1 MLRSMITASNTMFELQKQIDNISHNLANTDTTGYKAKNTSFSELIRQQIEQVNEKNNEVA 60 Query: 61 SGKEYLS---------------KEVGSFISTGTELDFALEGDA-WFALESPRGIILTRDG 104 + ++ + GS TG +LD AL +F + + TRDG Sbjct: 61 ASRKTPPGLRLGVGAVMTDRLTHKQGSLKETGRDLDIALTSPYQYFQVNVGGEVQYTRDG 120 Query: 105 RFKV-----TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEIS---------- 149 F + + + + VLD I+ Q+ + V E G ++ Sbjct: 121 AFYLTPAAGNANQMQLVTKEGHAVLDENGNAIRFNQRYKHIKVDESGSVTVSSDNQGEAP 180 Query: 150 ---QKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANS 206 G V A + + + + +++K+GFLE SN + Sbjct: 181 LRFNLGIVRAVKPQALTEEGSNLFSVSDELRATALINLNGAGRQDISLKQGFLESSNVDV 240 Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 EM +I + + + I ++ M I ++ Sbjct: 241 SKEMTDLISSQRSYQMNSRAITMGDQMMG-LINSVR 275 >gi|160901818|ref|YP_001567399.1| flagellar basal body rod protein [Petrotoga mobilis SJ95] gi|160359462|gb|ABX31076.1| flagellar basal body rod protein [Petrotoga mobilis SJ95] Length = 240 Score = 129 bits (323), Expect = 4e-28, Method: Composition-based stats. Identities = 50/247 (20%), Positives = 98/247 (39%), Gaps = 23/247 (9%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV----------GAIKND 51 A L L+++++N++N +TVG++ F V Sbjct: 1 MKGIYNATAGMLNSFAELNSISNNLANLNTVGYKKDFNLFKSVYEKEIRSYQNAQGKGEP 60 Query: 52 IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDD 111 I S V + + E G + T +LDFA+EGD +F +E TR+G F ++ + Sbjct: 61 IGNIYSSVVLDEVIPNLEQGPLVETSGKLDFAIEGDGFFKIERNGNYFYTRNGEFSLSPE 120 Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171 LV+ SG Y + + + + + ++G + T ++ + + Sbjct: 121 NYLVTKSGDYVLDEENNPILVDLDNFFVD---------EEGNISGTNTRLNILNVENLNK 171 Query: 172 RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 + L +++GFLE SN +++ EM +MI +KF+ + + + Sbjct: 172 YGENYF----TGEELGQAGNFNMRQGFLESSNVDALNEMIKMIEANRKFDILQKAVLTGD 227 Query: 232 KSMLEAI 238 + I Sbjct: 228 SLNAKLI 234 >gi|317179250|dbj|BAJ57038.1| flagellar basal-body rod protein [Helicobacter pylori F30] Length = 269 Score = 129 bits (323), Expect = 4e-28, Method: Composition-based stats. Identities = 51/268 (19%), Positives = 100/268 (37%), Gaps = 26/268 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDID---- 53 MQ + A A RL +++N++N +T GF+ F + + + Sbjct: 1 MQNGYYAATGAMAAQFNRLDLISNNLANLNTNGFKRDDAITGDFLRLYQQYREQLPLEDQ 60 Query: 54 ----------QKISFVASGKEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTR 102 + Y + +G+F T LDFAL + +FA+++ G+ TR Sbjct: 61 TKASAKYLNRNLNRVPILSEIYTDRSLGAFEETHNPLDFALTSPNLYFAIQTNEGVAYTR 120 Query: 103 DGRFKVTDDGSLVSASGKYP------VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156 DG F V DG LV+ +G + + + + N ++ Sbjct: 121 DGHFSVDKDGFLVTLNGFRVLSRSGLNEKGGIMLMPNAEIEVNQNGEITFRDNEAPIQAG 180 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + L S + + + + + +++ LE SN N++ EM +I + Sbjct: 181 ALALVSFSEPKNLKKIGQNLYTYQGEGI-HQISDSGALRQYMLEKSNVNAVREMSALIGI 239 Query: 217 TQKFNSITTLIDE-NEKSMLEAIRNIAS 243 + + + ++ + EAI +AS Sbjct: 240 NRFLDMYSKVLKTHQDDMNAEAINKLAS 267 >gi|71735751|ref|YP_275560.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv. phaseolicola 1448A] gi|289627765|ref|ZP_06460719.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289651644|ref|ZP_06482987.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv. aesculi str. 2250] gi|71556304|gb|AAZ35515.1| flagellar basal-body rod protein FlgF [Pseudomonas syringae pv. phaseolicola 1448A] gi|320325095|gb|EFW81164.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv. glycinea str. B076] gi|320329354|gb|EFW85347.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv. glycinea str. race 4] gi|330866424|gb|EGH01133.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330880528|gb|EGH14677.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv. glycinea str. race 4] gi|330889082|gb|EGH21743.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv. mori str. 301020] gi|330986470|gb|EGH84573.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv. lachrymans str. M301315] gi|331011044|gb|EGH91100.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 246 Score = 129 bits (323), Expect = 4e-28, Method: Composition-based stats. Identities = 49/245 (20%), Positives = 95/245 (38%), Gaps = 6/245 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + ++ A+N++N T GF + + + ++ ++ Sbjct: 1 MDKLLYVAMSGASENAIAQKAHANNLANVSTNGFMRDLEQARSM--PVFGEVMPSRAYAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119 S + G+ + TG ELD A++GD W A+++P G TR + G L SG Sbjct: 59 SERPGTDFSAGAMVETGRELDIAVKGDGWIAVQTPDGGEAYTRSSGMNIDALGVLRDGSG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176 + + + + Q+ EI G S + V + + G Sbjct: 119 LPVMGNGGPIAVPPQQQIEIGADGTISIRSLGESPQVMAQVDRIKLVKPDLKTMEKGPDG 178 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + P + + V V+ GFL+ SN N++ EM ++ L+++F ++ E+ Sbjct: 179 LIHTKTGRPADADATVQVESGFLQASNVNAVEEMTSVLALSRQFELHVKMMKTAEEDDQS 238 Query: 237 AIRNI 241 R + Sbjct: 239 MARVL 243 >gi|148240969|ref|YP_001220470.1| putative flagellar basal-body rod protein flgF [Bradyrhizobium sp. BTAi1] gi|146411345|gb|ABQ39798.1| putative flagellar basal-body rod protein flgF [Bradyrhizobium sp. BTAi1] Length = 244 Score = 129 bits (323), Expect = 4e-28, Method: Composition-based stats. Identities = 62/240 (25%), Positives = 110/240 (45%), Gaps = 12/240 (5%) Query: 9 LAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND-----IDQKISFVASGK 63 L+ +ALE+RL VA+N++N DT GFR ++ F E + K ++ +S V +G Sbjct: 9 LSRLIALERRLDNVANNVANADTTGFRARQLSFQEYLSPAKEGEANGKRERPVSLVNAGL 68 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPV 123 +Y G+ TG LD A+ GD +FA+++P+G TR G G LV+ G Sbjct: 69 QYPDSAGGAIQLTGNPLDVAIVGDGYFAVQTPQGERYTRAGSLTTDATGRLVTMDG--LP 126 Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183 + + PI + + + G IS + I ++ L D ++ S + + P Sbjct: 127 ILSRTGPITVAPGERSLTIASDGTISSSQRTIGSLRLVRFDGP---LQAMGSNLFESRSP 183 Query: 184 TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 V + G LE SN ++ EM ++ +T+ + + L+ ++ + + S Sbjct: 184 ALNIPTGSVKLLVGDLEKSNVQNVQEMSRLSEVTRSYEQVGGLLKNSQNVDD--LNKLGS 241 >gi|168180921|ref|ZP_02615585.1| flagellar hook protein FlgE [Clostridium botulinum NCTC 2916] gi|182668204|gb|EDT80183.1| flagellar hook protein FlgE [Clostridium botulinum NCTC 2916] gi|322806984|emb|CBZ04554.1| flagellar hook protein FlgE [Clostridium botulinum H04402 065] Length = 334 Score = 129 bits (323), Expect = 4e-28, Method: Composition-based stats. Identities = 43/331 (12%), Positives = 94/331 (28%), Gaps = 92/331 (27%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50 M S G++ A + RL V +N++N +T F++ ++F +++ + Sbjct: 1 MLRSMYSGISGLKAQQTRLDIVGNNIANANTTAFKSQSIRFQDMLSQNMSSATGPSANLG 60 Query: 51 --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP------------- 95 + Q V + G+ +TG LD A++G +F + Sbjct: 61 GTNPRQVGLGVQVAGIFTKFTTGNMQTTGRNLDMAIDGPGFFIVGKGKFSDTTTISTSGD 120 Query: 96 ---------RGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQ----------- 135 + T+DG F + +DGSL+++ G + + Sbjct: 121 NEGAINGGTMEVSFTKDGSFNLDEDGSLITSDGLRIMGYAINDAAITKDATTGKIKVGFK 180 Query: 136 ----------------------------------KDEIFNVGEKGEISQKGKVIATMGLY 161 + + + + + + Sbjct: 181 NADEDPKADATKLVPLAIPDEIEKGSEKVRVQSFTIDKDGLIVASLVDGTSAALGQIAMA 240 Query: 162 SVDMSQGFVRRENSGI-------------SPNIPPTPLEDLSGVTVKRGFLEDSNANSMY 208 S G + + + G +E SN + Sbjct: 241 SFKNEGGLEKMGKNLYRNSANSGEAIIRSGRGTDADKDNSKGYGDMLNGMIEMSNVDLAE 300 Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E +MI + F + +I ++ + E + Sbjct: 301 EFTEMIVANRAFQACGKMITTGDEILQELVN 331 >gi|46578927|ref|YP_009735.1| flagellar basal-body rod protein [Desulfovibrio vulgaris str. Hildenborough] gi|120603472|ref|YP_967872.1| hypothetical protein Dvul_2429 [Desulfovibrio vulgaris DP4] gi|46448339|gb|AAS94994.1| flagellar basal-body rod protein, putative [Desulfovibrio vulgaris str. Hildenborough] gi|120563701|gb|ABM29445.1| protein of unknown function DUF1078 domain protein [Desulfovibrio vulgaris DP4] gi|311232785|gb|ADP85639.1| flagellar basal-body rod protein FlgF [Desulfovibrio vulgaris RCH1] Length = 260 Score = 129 bits (323), Expect = 4e-28, Method: Composition-based stats. Identities = 57/260 (21%), Positives = 106/260 (40%), Gaps = 21/260 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-------- 52 MQ S GL L E RL+ +A+N++N +T G++ + F + + +D Sbjct: 1 MQDSMLSGLFGALTTEHRLNNIANNLANVNTNGYKRDVLAFKDTMALFAHDEIMEPMANV 60 Query: 53 --------DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDG 104 ++ GSF T LD A+ G+ +F + +P G TR+G Sbjct: 61 RSKKLFPEPLHVARPRIAVARTDFSQGSFHYTSDPLDLAISGNGFFKVRTPEGEFYTRNG 120 Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 F+ T DG LV+ G + + + + + + V G I+ G + + + +V Sbjct: 121 HFRQTSDGQLVTMQGWPVLSEGGDINL---PQGKNLQVASDGRIAVDGVDVGQLQVVTVS 177 Query: 165 MSQGFVRRENSGIS--PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222 +G + + + V V +G++E SN + EM MI ++F + Sbjct: 178 DLEGLEKLGGNLYRLREGSTAGEVPVGPDVIVSQGYIETSNVEVVNEMVNMIETQRQFEA 237 Query: 223 ITTLIDENEKSMLEAIRNIA 242 ++ ++ +AI I Sbjct: 238 YQKVMQTSDTVDRDAITKIG 257 >gi|91976615|ref|YP_569274.1| flagellar basal body rod protein [Rhodopseudomonas palustris BisB5] gi|91683071|gb|ABE39373.1| flagellar basal body rod protein [Rhodopseudomonas palustris BisB5] Length = 244 Score = 129 bits (323), Expect = 4e-28, Method: Composition-based stats. Identities = 60/224 (26%), Positives = 102/224 (45%), Gaps = 6/224 (2%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND---IDQKISFVASGK 63 IGL+ +AL+Q++ +A N++N +T GF+ ++F E + K + + Sbjct: 7 IGLSRLIALQQQVDNLARNVANQNTTGFKREGIRFLEYLTDAKEADDIPSAPKRSLVAVT 66 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPV 123 Y GS TG D A+ GD +F + + RG TR+G F + G LV+ SG + Sbjct: 67 GYTDFSAGSLQLTGNSTDAAVLGDGFFVVRTSRGDRYTRNGAFTLDKQGRLVTLSGDLVL 126 Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183 A+ I++P D ++G G IS +I + + D + V + PP Sbjct: 127 --AANGTIKVPLTDVNLSIGTDGTISTARSIIGRLRVVKFDDPRSLVAEGTGLFASGSPP 184 Query: 184 TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 L S + LE SN NS+ EM ++ T+ + + ++ Sbjct: 185 IELNAGSI-RLATNALERSNVNSIREMSDLVAATRAYEQVANVV 227 >gi|302185581|ref|ZP_07262254.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv. syringae 642] gi|330953725|gb|EGH53985.1| flagellar basal body rod protein FlgF [Pseudomonas syringae Cit 7] Length = 246 Score = 129 bits (323), Expect = 4e-28, Method: Composition-based stats. Identities = 49/245 (20%), Positives = 95/245 (38%), Gaps = 6/245 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + ++ A+N++N T GF + + + ++ ++ Sbjct: 1 MDKLLYVAMSGASENAIAQKAHANNLANVSTNGFMRDLEQARSM--PVFGEVMPSRAYAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119 S + G+ + TG ELD A++GD W A+++P G TR + G L SG Sbjct: 59 SERPGTDFSAGAMVQTGRELDIAVKGDGWIAVQTPDGGEAYTRSSGMNIDALGVLRDGSG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176 + + + + Q+ EI G S + V + + G Sbjct: 119 LPVMGNGGPIAVPPQQQIEIGADGTISIRSLGESPQVMAQVDRIKLVKPDLKTMEKGPDG 178 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + P + + V V+ GFL+ SN N++ EM ++ L+++F ++ E+ Sbjct: 179 LIHTKTGRPADADATVQVESGFLQASNVNAVEEMTSVLALSRQFELHVKMMKTAEEDDQS 238 Query: 237 AIRNI 241 R + Sbjct: 239 MARVL 243 >gi|52841452|ref|YP_095251.1| flagellar basal body rod protein FlgF [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52628563|gb|AAU27304.1| flagellar basal body rod protein FlgF [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 248 Score = 129 bits (323), Expect = 4e-28, Method: Composition-based stats. Identities = 52/247 (21%), Positives = 109/247 (44%), Gaps = 7/247 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI--SF 58 M+ ++ + +R +A+N++N +T GF+ + + N +Q SF Sbjct: 1 MEPILYNSISGSRSDFKRQEIIANNLANINTPGFKADLYQAQTMYMNNANGNNQFSAHSF 60 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSA 117 + + G I+TG +LD A++GD W A++ + TR G ++ +G L++A Sbjct: 61 ITQNANGIDTSPGEIITTGRDLDVAIDGDGWMAVQDSQGREAYTRGGSLRLNPNGQLITA 120 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV---IATMGLYSVDMSQGFVRREN 174 SGK + D + I Q EI + G + +G V + V + + + + + Sbjct: 121 SGKVVLGDGGPISIPPAQSIEIGSDGTISIVPLEGDVKSLAILDRIKLVTLDRNNIYKND 180 Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 G+ + + ++ G LE SN ++ +M MI ++F++ L+ + + Sbjct: 181 EGLIQLKSGAATANSNI-KLQSGALEGSNVKAIDQMVAMISAGREFDAQMKLLSTVDDNG 239 Query: 235 LEAIRNI 241 + + + Sbjct: 240 QKLAQLL 246 >gi|331007438|ref|ZP_08330615.1| Flagellar basal-body rod protein flgF [gamma proteobacterium IMCC1989] gi|330418745|gb|EGG93234.1| Flagellar basal-body rod protein flgF [gamma proteobacterium IMCC1989] Length = 246 Score = 129 bits (323), Expect = 5e-28, Method: Composition-based stats. Identities = 45/245 (18%), Positives = 98/245 (40%), Gaps = 7/245 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + I + + + ++N++N +T GFR+ + + G + +F Sbjct: 1 MDKALYIAMTSAKNNMLGQAIRSNNLANANTTGFRSDFEQARSM-GVYYGEGLPTRAFAL 59 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + G+ I TG +LD A++G + A+++ TR G V G L + + Sbjct: 60 TETPQTNFAEGALIQTGRDLDVAVKGRGFIAVQAADGREAYTRAGSLYVDSAGVLRTGNN 119 Query: 120 KYPV---LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + MA Q + V G+ + + V+ + +++ G Sbjct: 120 LPVMGNAGPMAIPEFQKLEIGLDGIVSIVGKGEAPDALAQVDQIKLVNPDEALLKKGADG 179 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + ++ V++ GFLE SN N + E+ ++ L +++ L+ E++ Sbjct: 180 LLYAEEDVGIDVD--VSLVSGFLEGSNVNPVNELTHILTLARQYEMSIKLMKTTEENSQA 237 Query: 237 AIRNI 241 + R + Sbjct: 238 SARLL 242 >gi|15596278|ref|NP_249772.1| flagellar basal body rod protein FlgF [Pseudomonas aeruginosa PAO1] gi|107100526|ref|ZP_01364444.1| hypothetical protein PaerPA_01001551 [Pseudomonas aeruginosa PACS2] gi|116049010|ref|YP_792188.1| flagellar basal body rod protein FlgF [Pseudomonas aeruginosa UCBPP-PA14] gi|218892955|ref|YP_002441824.1| flagellar basal body rod protein FlgF [Pseudomonas aeruginosa LESB58] gi|254234217|ref|ZP_04927540.1| flagellar basal-body rod protein FlgF [Pseudomonas aeruginosa C3719] gi|254239439|ref|ZP_04932761.1| flagellar basal-body rod protein FlgF [Pseudomonas aeruginosa 2192] gi|296390555|ref|ZP_06880030.1| flagellar basal body rod protein FlgF [Pseudomonas aeruginosa PAb1] gi|313106036|ref|ZP_07792295.1| flagellar basal-body rod protein FlgF [Pseudomonas aeruginosa 39016] gi|9946997|gb|AAG04470.1|AE004539_12 flagellar basal-body rod protein FlgF [Pseudomonas aeruginosa PAO1] gi|115584231|gb|ABJ10246.1| flagellar basal-body rod protein FlgF [Pseudomonas aeruginosa UCBPP-PA14] gi|126166148|gb|EAZ51659.1| flagellar basal-body rod protein FlgF [Pseudomonas aeruginosa C3719] gi|126192817|gb|EAZ56880.1| flagellar basal-body rod protein FlgF [Pseudomonas aeruginosa 2192] gi|218773183|emb|CAW28995.1| flagellar basal-body rod protein FlgF [Pseudomonas aeruginosa LESB58] gi|310878797|gb|EFQ37391.1| flagellar basal-body rod protein FlgF [Pseudomonas aeruginosa 39016] Length = 249 Score = 129 bits (323), Expect = 5e-28, Method: Composition-based stats. Identities = 49/239 (20%), Positives = 89/239 (37%), Gaps = 9/239 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + ++ + A+N++N T GFR + + + D F Sbjct: 1 MDKMLYVSMSGASQNTLAMRAHANNLANISTSGFRRDFEQARSM--QVFGDSFPARVFAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 S + GS TG ELD A++GD + A+++P R + G L + G Sbjct: 59 SERPGTDFSHGSLQETGNELDIAIDGDGFVAVQAPDGSEAYVRTAGMHIDALGMLRTGDG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEIS---QKGKVIATMGLYSVDMSQGFVRRENSG 176 + + + + +K EI G + V + V+ + + + G Sbjct: 119 LPVLGNGGPIAVPPEEKVEIGQDGTISIRALGENPNVVAVVDRIKLVNPNLKQMEKGTDG 178 Query: 177 ---ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 P + V V GFLE SN N++ EM ++ L+++F ++ E Sbjct: 179 LLHYKPQPGEQAPLADANVKVVSGFLESSNVNAVEEMTAILSLSRQFELHVKMMRTAED 237 >gi|317130723|ref|YP_004097005.1| flagellar hook-basal body protein [Bacillus cellulosilyticus DSM 2522] gi|315475671|gb|ADU32274.1| flagellar hook-basal body protein [Bacillus cellulosilyticus DSM 2522] Length = 274 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 39/274 (14%), Positives = 87/274 (31%), Gaps = 35/274 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS--- 57 M A + ++R + +N++N +T G++ + + + Sbjct: 1 MLRGLYSAGAGMITQQRRQEMLTNNLANIETPGYKADQASIRSFPNQLIQAMGTNHMQKF 60 Query: 58 ----------FVASGKEYLSKEVGSFISTGTELDFALEGD--------------AWFALE 93 V + + G T D AL + Sbjct: 61 GTNVIGELSTGVYMQERTPNFRQGDLQETFNSTDIALLQGVVPTNEETGQQAALMFVIEN 120 Query: 94 SPRGIILTRDGRFKVTDDGSLVSASGKYPVLDM-----ASVPIQIPQKDEIFNVGEKGEI 148 S + +R+G F V G L ++ G Y + I + + + I Sbjct: 121 SEGDLRYSRNGNFTVDGAGFLTTSQGNYVLDADGDRINVGNEDFIVRSNGEIIDANEQFI 180 Query: 149 SQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMY 208 +Q + V G +R + + + +++GFLE +N ++ Sbjct: 181 AQLDIALIADPDQLVKEGAGLLRYDGDNAIESAIDNAE---ATFQLQQGFLERANVDAAQ 237 Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 M +M+ + F + ++ ++S+ A+ +I Sbjct: 238 TMTEMMSALRTFEANQRVLQAYDRSLERAVNDIG 271 >gi|33592480|ref|NP_880124.1| flagellar basal body rod protein FlgF [Bordetella pertussis Tohama I] gi|33572126|emb|CAE41668.1| flagellar basal-body rod protein FlgF [Bordetella pertussis Tohama I] gi|332381897|gb|AEE66744.1| flagellar basal body rod protein FlgF [Bordetella pertussis CS] Length = 254 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 65/253 (25%), Positives = 107/253 (42%), Gaps = 11/253 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + + + +NM+N +T GFR + V A + ++S VA Sbjct: 1 MDRIIYTAMNGAARIAEHQTVLGNNMANVNTPGFREQIALYRSVPMADGTSLPTRVSTVA 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 S + E+G+ ++TG ELD AL G WFAL++P+G TR G +V +G L +A+G+ Sbjct: 61 S-TPGNNFEMGNMMTTGRELDVALAGPGWFALQTPQGEAYTRAGALQVGVNGLLQTATGQ 119 Query: 121 YPVLDMASVPIQIPQKD----EIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + D +V Q V G ++ L V+ + + G Sbjct: 120 PVLSDQNAVIEVPDQASLTIASDGTVTAIGAGDPPNNILNLGRLKMVNPPPQQLVHGDDG 179 Query: 177 ISPN------IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + P PL + G LE SNA+ M M MI ++F +I E Sbjct: 180 VFRMPPQPGGQPAAPLPADPSQRLLSGVLEGSNASPMGAMVGMIQNARRFEMQMQVIREA 239 Query: 231 EKSMLEAIRNIAS 243 +K+ A +A+ Sbjct: 240 DKNAERANGILAA 252 >gi|304407727|ref|ZP_07389378.1| fagellar hook-basal body protein [Paenibacillus curdlanolyticus YK9] gi|304343210|gb|EFM09053.1| fagellar hook-basal body protein [Paenibacillus curdlanolyticus YK9] Length = 288 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 47/286 (16%), Positives = 88/286 (30%), Gaps = 44/286 (15%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRT---IKVKFSEVVGAIKN------- 50 M A ++R TV +N+SN +T G++ + F E++ A+ Sbjct: 1 MLRGLYTAAAGLTTQQRRHDTVTNNISNINTPGYKQTNEVTRSFPEMLLALTGTNDNSDK 60 Query: 51 DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGD----------------------- 87 I + + V + + + G T DF L + Sbjct: 61 RIGKLATGVFAEESLSLQLQGDLTETKRSGDFGLSANIQVPGITFDESGKYVSDTGEVTF 120 Query: 88 ----AWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVG 143 + TR+GRF + +G L+ A G + Sbjct: 121 QPQAYFTVEGQDGQPRYTRNGRFDLDQNGYLIMADGSRVLGKNGQPVQFQAGTSMDDLQL 180 Query: 144 EKGEISQKGKVIATMGL----YSVDMSQGFVRRENS---GISPNIPPTPLEDLSGVTVKR 196 A G + VR + + + GV VK+ Sbjct: 181 TDDFRFINTVTGADTGQSLQLTKIADPNALVREGDGKFRLVGDANLAEAVAAEDGVVVKQ 240 Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G+ E SN +S M ++ + + + ++ +KS+ +A+ I Sbjct: 241 GYYERSNVDSAQSMVDLMAALRAYEANQKVVQFYDKSLDKAVNEIG 286 >gi|283834454|ref|ZP_06354195.1| flagellar basal-body rod protein FlgF [Citrobacter youngae ATCC 29220] gi|291070001|gb|EFE08110.1| flagellar basal-body rod protein FlgF [Citrobacter youngae ATCC 29220] Length = 245 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 47/237 (19%), Positives = 85/237 (35%), Gaps = 7/237 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M L+ A+N++N +T GFR S +K Sbjct: 1 MDRLIYTALSGATQTLLEQQISANNLANVNTNGFRADMAMASN--DKVKGGGFDTRFMAK 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119 ++ G T LD A++G + A + + TR+G + D G ++ G Sbjct: 59 ESPSGVNDSTGVAEKTERPLDVAIQGSGYIAVQDKAGNEVYTRNGNIQQDDQG-QLTIDG 117 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176 + D + + + G G V ATM + VD+ + + + G Sbjct: 118 NVVLGDNGPIILPPNAIASFGSDGTLSVTPDDGDVTATMDIDRLKLVDIPVANLAKNSEG 177 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 + P + + V GFLE SN +++ EM I + ++F + ++ E Sbjct: 178 MLVTADGIPAQRDENIKVSGGFLEGSNVSAVSEMMSSIAMNRQFEAQIKMMKTAEDL 234 >gi|163856436|ref|YP_001630734.1| flagellar basal body rod protein FlgF [Bordetella petrii DSM 12804] gi|163260164|emb|CAP42466.1| flagellar basal-body rod protein FlgF [Bordetella petrii] Length = 249 Score = 128 bits (322), Expect = 6e-28, Method: Composition-based stats. Identities = 53/243 (21%), Positives = 96/243 (39%), Gaps = 7/243 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + + +NM+N T GFR + V + ++S V Sbjct: 1 MDRIIYTAMGGAARAAEHQAVLNNNMANVSTPGFREQLAMYRSVPVLDGTSLPTRVSTV- 59 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + + ++G+ +TG LD AL G W A+++P+G TR G +V +G L +A G+ Sbjct: 60 TATPGSNFQLGNMETTGRALDVALAGPGWLAIQTPQGEAYTRAGDLQVGVNGLLQTAQGQ 119 Query: 121 YPVLDMAS----VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + D + + G ++ L V+ + + R + G Sbjct: 120 PVLSDQNGVIDVPELATLTIASDGTITALGAGDPPNNILNLGRLKMVNPPETAMVRGDDG 179 Query: 177 ISPNI--PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 + PL + + G LE SNA+ + M MI ++F +I E +K+ Sbjct: 180 VFRMAQGGGQPLPADPALRLMSGVLESSNASPIKAMVGMIDNARRFEMQMQVISEADKNA 239 Query: 235 LEA 237 A Sbjct: 240 ERA 242 >gi|260568536|ref|ZP_05839005.1| flagellar basal body rod protein [Brucella suis bv. 4 str. 40] gi|260155201|gb|EEW90282.1| flagellar basal body rod protein [Brucella suis bv. 4 str. 40] Length = 202 Score = 128 bits (322), Expect = 6e-28, Method: Composition-based stats. Identities = 70/214 (32%), Positives = 108/214 (50%), Gaps = 14/214 (6%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 S +GL++ + LE+R+ +A N++N TVGFR KF +V +D +SF + Sbjct: 3 NNSIYVGLSSLITLERRMDAIAHNVANASTVGFRGEGTKFDTIVSDKASD---DVSFATA 59 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 GK Y+ E G I T LD A++GDAW + +P+G + +RDGR K+ G LVS +G Sbjct: 60 GKSYIRTEAGPLIKTDNPLDVAVKGDAWMSFSTPQGQVYSRDGRMKMLSTGDLVSVTGN- 118 Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 I + G I Q G + +GLY++ SG+ P+ Sbjct: 119 ----------AILDVGGAPRISSDGAIYQNGVQVGVIGLYTIPADADLAYAGTSGVIPSK 168 Query: 182 PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIH 215 P P+ D + V V +G +E SN ++M EM ++I Sbjct: 169 PAQPVVDDNSVGVVQGMIEGSNVDAMTEMTRLIS 202 >gi|15645706|ref|NP_207883.1| flagellar basal-body rod protein (flgG) [Helicobacter pylori 26695] gi|2314244|gb|AAD08138.1| flagellar basal-body rod protein (flgG) [Helicobacter pylori 26695] Length = 269 Score = 128 bits (322), Expect = 6e-28, Method: Composition-based stats. Identities = 53/268 (19%), Positives = 98/268 (36%), Gaps = 26/268 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDID---- 53 MQ + A RL ++N++N +T GF+ F + + + Sbjct: 1 MQNGYYAATGAMATQFNRLDLTSNNLANLNTNGFKRDDAITGDFLRLYQQYREQLPLEDQ 60 Query: 54 ----------QKISFVASGKEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTR 102 + Y + +G+F T LDFAL + +FA+++ GI TR Sbjct: 61 TKASAKYLNRNLNRVPILSEIYTDRSLGAFEETHNPLDFALTSPNLYFAIQTNEGIAYTR 120 Query: 103 DGRFKVTDDGSLVSASGKYP---VLDMASVPIQIPQKDEIFNVGEKGEISQKGK---VIA 156 DG F V DG LV+ +G I + EI G + + Sbjct: 121 DGHFSVDKDGFLVTLNGFRVLSRSGLNEKGGIMLMPDAEIEVDQNGGITFRDNEAQIQAG 180 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + L S + + + + + +++ LE SN N++ EM +I + Sbjct: 181 ALALVSFSEPKNLKKIGQNLYTYQGEGV-HQVSDSGALRQYMLEKSNVNAVREMSALIEI 239 Query: 217 TQKFNSITTLIDE-NEKSMLEAIRNIAS 243 + + + ++ + EAI +A+ Sbjct: 240 NRFLDMYSKVLKTHQDDMNAEAINKLAA 267 >gi|308063216|gb|ADO05103.1| flagellar basal-body rod protein [Helicobacter pylori Sat464] Length = 269 Score = 128 bits (322), Expect = 6e-28, Method: Composition-based stats. Identities = 51/268 (19%), Positives = 101/268 (37%), Gaps = 26/268 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDID---- 53 MQ + A +A RL ++N++N +T GF+ F + + + Sbjct: 1 MQNGYYAATGAMVAQFNRLDLTSNNLANLNTNGFKRDDAVTGDFLRLYQQYREQLPLEDQ 60 Query: 54 ----------QKISFVASGKEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTR 102 + Y + +G+F T LDFAL + +FA+++ G+ TR Sbjct: 61 TKASAKYLNRNLNRVPILSEIYTDRSLGAFEETHNPLDFALTSPNLYFAIQTNEGVAYTR 120 Query: 103 DGRFKVTDDGSLVSASGKYP------VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156 DG F V DG LV+ +G + + + + N ++ Sbjct: 121 DGHFSVDKDGFLVTLNGFRVLSRSGLNEKGGIMLMPNAEIEVNQNGEITFRDNEAPIQAG 180 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + L S + + + + + ++++ LE SN N++ EM +I + Sbjct: 181 ALALVSFSEPKNLKKIGQNLYTYQGEGV-HQISDSGSLRQYMLEKSNVNAVREMSALIGI 239 Query: 217 TQKFNSITTLIDE-NEKSMLEAIRNIAS 243 + + + ++ + EAI +AS Sbjct: 240 NRFLDMYSKVLKTHQDDMNAEAINKLAS 267 >gi|66046705|ref|YP_236546.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv. syringae B728a] gi|63257412|gb|AAY38508.1| Flagellar basal body rod protein:Protein of unknown function DUF1078 [Pseudomonas syringae pv. syringae B728a] gi|330899405|gb|EGH30824.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv. japonica str. M301072PT] gi|330972415|gb|EGH72481.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv. aceris str. M302273PT] gi|330975978|gb|EGH76044.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 246 Score = 128 bits (322), Expect = 6e-28, Method: Composition-based stats. Identities = 49/245 (20%), Positives = 95/245 (38%), Gaps = 6/245 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + ++ A+N++N T GF + + + ++ ++ Sbjct: 1 MDKLLYVAMSGASENAIAQKAHANNLANVSTNGFMRDLEQARSM--PVFGEVMPSRAYAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119 S + G+ + TG ELD A++GD W A+++P G TR + G L SG Sbjct: 59 SERPGTDFSAGAMVQTGRELDIAVKGDGWIAVQTPDGGEAYTRSSGMNIDALGVLRDGSG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176 + + + + Q+ EI G S + V + + G Sbjct: 119 LPVMGNGGPIAVPPQQQIEIGADGTISIRSLGESPQVMAQVDRIKLVRPDLKTMEKGPDG 178 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + P + + V V+ GFL+ SN N++ EM ++ L+++F ++ E+ Sbjct: 179 LIHTKTGRPADADATVQVESGFLQASNVNAVEEMTSVLALSRQFELHVKMMKTAEEDDQS 238 Query: 237 AIRNI 241 R + Sbjct: 239 MARVL 243 >gi|34498339|ref|NP_902554.1| flagellar basal-body rod protein flgF [Chromobacterium violaceum ATCC 12472] gi|34104193|gb|AAQ60552.1| flagellar basal-body rod protein flgF [Chromobacterium violaceum ATCC 12472] Length = 246 Score = 128 bits (322), Expect = 6e-28, Method: Composition-based stats. Identities = 45/245 (18%), Positives = 95/245 (38%), Gaps = 6/245 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + +T A+N++N +T F+ + + + D ++V Sbjct: 1 MDRVLFLAMTGAKHEAWQQATTANNLANVNTNAFKADLAAYRAL--PVVGDGAPTRTYVV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASG 119 GS TG DFAL +FA++ + TRDG + + G + + SG Sbjct: 59 DNTIGFDASQGSLQHTGNPSDFALGTPGFFAVQGADGQEAYTRDGGYVLDATGLMRTHSG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM---GLYSVDMSQGFVRRENSG 176 + D + + + ++ + G + Q G A + V+ V + Sbjct: 119 LLIMGDGGPITVPAGSQVQLGSDGSVMAVPQSGANRAPQLVGQIKMVNPGPKDVYKGEDK 178 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + L + V + LE SN NS+ + QMI +++ ++ ++++ + Sbjct: 179 LFHVNGGGTLPASADVKLVPETLESSNVNSVEALVQMISHGRQYELNIKMMQTSQQNDQQ 238 Query: 237 AIRNI 241 A + + Sbjct: 239 AAQLL 243 >gi|167567752|ref|ZP_02360668.1| flagellar basal body rod protein FlgG [Burkholderia oklahomensis EO147] gi|167574703|ref|ZP_02367577.1| flagellar basal body rod protein FlgG [Burkholderia oklahomensis C6786] Length = 258 Score = 128 bits (322), Expect = 6e-28, Method: Composition-based stats. Identities = 49/255 (19%), Positives = 92/255 (36%), Gaps = 20/255 (7%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID----------- 53 I A + RL +A+N++N +TVGF+ ++ F ++ I+ Sbjct: 1 MWISKTGLQAQDARLQAIANNLANANTVGFKRDRMVFEDLFYRIERQPGAQLDQNNAAPL 60 Query: 54 --QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTD 110 Q + GS +TG LD A+ G + ++ G TR G+ Sbjct: 61 GVQLGTGTRLVGTQKVFTDGSVQTTGQALDVAIVGKGFLQMQLANGETGYTRAGQLTKNA 120 Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169 +G L +A G ++A E V K + + + + L G Sbjct: 121 EGLLTNAQGLPLQPEIAIPENATEIVIGENGVVAVKTPGASELTEVGQVQLADFVNPAGL 180 Query: 170 VRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224 + ++ + P + T +K+G LE SN + EM +MI + + T Sbjct: 181 LSIGDNLYMETVASGPPNEGDPGTDAFGKIKQGSLEASNVKVVDEMVEMIAAQRTYEMNT 240 Query: 225 TLIDENEKSMLEAIR 239 ++ + + + Sbjct: 241 KVLSAADSMLQYLAQ 255 >gi|152988763|ref|YP_001349649.1| flagellar basal body rod protein FlgF [Pseudomonas aeruginosa PA7] gi|150963921|gb|ABR85946.1| flagellar basal-body rod protein FlgF [Pseudomonas aeruginosa PA7] Length = 249 Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats. Identities = 49/239 (20%), Positives = 89/239 (37%), Gaps = 9/239 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + ++ + A+N++N T GFR + + + D F Sbjct: 1 MDKMLYVSMSGASQNTLAMRAHANNLANISTSGFRRDFEQARSM--QVFGDSFPARVFAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 S + GS TG ELD A++GD + A+++P R + G L + G Sbjct: 59 SERPGTDFSHGSLQETGNELDIAIDGDGFVAVQAPDGSEAYVRTAGMHIDAVGMLRTGDG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEIS---QKGKVIATMGLYSVDMSQGFVRRENSG 176 + + + + +K EI G + V + V+ + + + G Sbjct: 119 LPVLGNGGPIAVPPEEKVEIGQDGTISIRALGENPNVVAVVDRIKLVNPNLKQMEKGTDG 178 Query: 177 ---ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 P + V V GFLE SN N++ EM ++ L+++F ++ E Sbjct: 179 LLHYKPQPGEQVPLADANVKVVSGFLESSNVNAVEEMTAILSLSRQFELHVKMMRTAED 237 >gi|225569955|ref|ZP_03778980.1| hypothetical protein CLOHYLEM_06050 [Clostridium hylemonae DSM 15053] gi|225161425|gb|EEG74044.1| hypothetical protein CLOHYLEM_06050 [Clostridium hylemonae DSM 15053] Length = 236 Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats. Identities = 43/252 (17%), Positives = 91/252 (36%), Gaps = 27/252 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------Q 54 M TSF + +L+ +++N +N +T G++ F +++ + Sbjct: 1 MNTSFYTASRGARTQQDKLNVISNNFANVNTYGYKAKSSVFQDLMYYNMRAGEGVATHLT 60 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP--RGIILTRDGRFKVT--D 110 + + D+A+ GD +F L P I TR+G F ++ Sbjct: 61 SGTGTVLDHTNTNFSQSGLGDGIGGYDYAISGDGFFMLRDPVTNEISYTRNGHFSLSRRA 120 Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170 DG + VLD PI++ G + G+YS + G Sbjct: 121 DGFYLVTDSNKLVLDEGQNPIRVQG----------------GTLQGRPGVYSFASTDGMQ 164 Query: 171 RRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 ++ P + G+LE SN + EM + ++ ++ + ++ + Sbjct: 165 SAGDNEFVPVAKNGAPVLNREAKLLEGYLELSNVDMAQEMANTVESSRAYSYVLKMVQSS 224 Query: 231 EKSMLEAIRNIA 242 ++ + + I ++ Sbjct: 225 DE-IEQTINSLR 235 >gi|74101659|gb|AAZ99749.1| FlgFL [Aeromonas hydrophila] Length = 244 Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats. Identities = 47/244 (19%), Positives = 90/244 (36%), Gaps = 7/244 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV-VGAIKNDIDQKISFV 59 M+ ++ A+N++N +T GFRT F V A+ D Sbjct: 1 MEKLIYTAMSGAQHTLMAQQIRANNLANVNTAGFRTD---FERVSAYALTGDGYLSRVMA 57 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSAS 118 + G+ + TG +LD A+ G+ + +++ TR G +V +G L++ + Sbjct: 58 REEMAGTDFKAGALMQTGRKLDVAVRGEGFITVQTADGKEAYTRAGNLEVDAEG-LLTLN 116 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF-VRRENSGI 177 G+ + D + + + G G +G + + + G+ Sbjct: 117 GRPVLGDGGEMVLPAYRDLSFGKDGSLSITPPGGGARLDVGRLKLVNPDPVELVKGPDGL 176 Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 E V + GFLE +N N++ E+ + LT+ F L+ + + Sbjct: 177 FRLRQGGDAETSEQVVLASGFLEGANVNAVDELISSMSLTRNFELQVKLMKTADDQARQG 236 Query: 238 IRNI 241 R I Sbjct: 237 ARLI 240 >gi|323490138|ref|ZP_08095358.1| flagellar basal-body rod protein [Planococcus donghaensis MPA1U2] gi|323396186|gb|EGA89012.1| flagellar basal-body rod protein [Planococcus donghaensis MPA1U2] Length = 278 Score = 128 bits (321), Expect = 7e-28, Method: Composition-based stats. Identities = 47/278 (16%), Positives = 94/278 (33%), Gaps = 38/278 (13%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA------------- 47 M + +A ++ + +N+SN +T GF+ + F Sbjct: 1 MFRGLYTATSGMMANNRQQQILTNNLSNANTPGFKEDQTVFRAFPEQLIKAVENSKKGTI 60 Query: 48 IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGD--------------AWFALE 93 + ++I + V + + S G TG + D AL + + Sbjct: 61 VPHNIGTLTTGVYTQEGIPSFLQGPLKETGNQTDIALLDELLPTNPDTQQKGSMVFAVAA 120 Query: 94 SPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK 153 + T++G F V G L ++ G + + + + GE + G Sbjct: 121 EDGEVRYTKNGSFAVDTQGFLTTSDGFSVLGEDLQPIQVGSADFTVQDNGEI--LLANGA 178 Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED---------LSGVTVKRGFLEDSNA 204 + + + Q FV+ + + P + +K+GF+E SN Sbjct: 179 QGDRLWVGYTENPQQFVKEGQNLLRWAGAPEASPQFIDNFDLLDGTPSFMKQGFVEQSNV 238 Query: 205 NSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 + M M+ + F S +I ++SM +A+ I Sbjct: 239 DLTKTMTDMMTTYRGFESNQKVIQAYDRSMEKAVNEIG 276 >gi|154687759|ref|YP_001422920.1| FlhO [Bacillus amyloliquefaciens FZB42] gi|154353610|gb|ABS75689.1| FlhO [Bacillus amyloliquefaciens FZB42] Length = 265 Score = 128 bits (321), Expect = 7e-28, Method: Composition-based stats. Identities = 44/267 (16%), Positives = 97/267 (36%), Gaps = 29/267 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKND-----I 52 M +A + ++R +++N++N +T G++ + F E++ + I Sbjct: 1 MLKGLYTATSAMITQQRRTEMLSNNIANANTSGYKEDQGSIRAFPEMLLSRIEGDKKTKI 60 Query: 53 DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA-------------WFALESPRGII 99 + V + GS +T D AL + ++ +++ G+ Sbjct: 61 GSVNTGVYMQELKPLFTQGSLKTTDQPTDIALMENQVPKNAETNENAELFYPVQTAGGVR 120 Query: 100 LTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG 159 ++ F + ++ + ++ +G + I +E F V E G ++ G+ + Sbjct: 121 YSKSSTFSLNEN-NQLTINGNLVLSTNGQP---ITVDNEKFTVSENGTVTTNGRPAGQID 176 Query: 160 LYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTV----KRGFLEDSNANSMYEMGQMIH 215 + + + R N S + V K+G E SN + +M Sbjct: 177 IRMEEDVRNLKRDGNDLYSTADGSELPSAAANPQVSYSLKQGVSELSNVDVTSTYTEMTE 236 Query: 216 LTQKFNSITTLIDENEKSMLEAIRNIA 242 + F + +I +KSM +A I Sbjct: 237 AYRSFEANQKVIQAYDKSMDKAANEIG 263 >gi|38570329|gb|AAR24612.1| flagellar basal-body rod protein [Campylobacter jejuni subsp. jejuni] Length = 270 Score = 128 bits (321), Expect = 7e-28, Method: Composition-based stats. Identities = 50/268 (18%), Positives = 103/268 (38%), Gaps = 25/268 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDID---- 53 MQ + + +L + +N++N +T G++ V F + ++++ Sbjct: 1 MQNGYYQATGGMVTQFNKLDVITNNLANINTSGYKRDDVVIADFKRIFKETQDELPIENH 60 Query: 54 ----------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILT 101 +EY +GS +T LD A+ + F + LT Sbjct: 61 TRDASRFVNTTIDGIPQVSQEYTDFSLGSLKATNNPLDLAMTREDAFYLVQTKDGEVRLT 120 Query: 102 RDGRFKVTDDGSLVSASGKYP-----VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156 +DG F++ D+G LV+ G + + I+IP +V + G I G A Sbjct: 121 KDGNFQLDDEGYLVNKQGYKVLSSDYFNNPQNAGIRIPNSAVQISVDKNGSIEVDGAQNA 180 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + + VD + + ++ + + + +++GF + SN N + EM +I Sbjct: 181 RLFVAQVDDIRALQKDGDNVYKIDDLTRIRDLKNSNAIRKGFSQGSNVNPVTEMVGLIEA 240 Query: 217 TQKFNSITTLIDEN-EKSMLEAIRNIAS 243 + ++ + + EAI +A+ Sbjct: 241 NRMVEMYQKVMTAHMDDLNQEAINKLAA 268 >gi|326386930|ref|ZP_08208544.1| hypothetical protein Y88_1568 [Novosphingobium nitrogenifigens DSM 19370] gi|326208610|gb|EGD59413.1| hypothetical protein Y88_1568 [Novosphingobium nitrogenifigens DSM 19370] Length = 270 Score = 128 bits (321), Expect = 8e-28, Method: Composition-based stats. Identities = 61/270 (22%), Positives = 90/270 (33%), Gaps = 31/270 (11%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK--NDIDQKISFVAS 61 S+ L+ + LS + +N++N DT GF+ V FS +V A N + Sbjct: 2 SYYTSLSGLQNAQTDLSVIGNNIANADTNGFKKSSVDFSNLVAASAFTNPKNIVGIGSTV 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPR--GIILTRDGRFKVTDDGSLVSASG 119 G TG+ LD + GD +F S + TR+G F + G L SG Sbjct: 62 QSINQDFAQGGVKQTGSALDLMISGDGFFTTSSAVTGQVYYTRNGSFSMDGQGYLTDGSG 121 Query: 120 K---------------------YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158 L A+ VI + Sbjct: 122 NRLQVFPTDSSGNVTSTTPGSAQVPLTNAAGSQFSGATVAADGSISVSYADGSNSVIGKV 181 Query: 159 GLYSVDMSQGFVRRENS-----GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQM 213 L S QG + +S GIS ++ G LE SN + EM + Sbjct: 182 ALASFVAPQGLKQVGSSNYTSTGISGTATYGQPSTGQYGSLMSGSLEASNVDLSSEMVNL 241 Query: 214 IHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 I Q F + ID ++ +AI N+ S Sbjct: 242 ITAQQYFQANAKAID-ANTTINDAIINLKS 270 >gi|315124199|ref|YP_004066203.1| putative flagellar basal-body rod protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315017921|gb|ADT66014.1| putative flagellar basal-body rod protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 270 Score = 128 bits (321), Expect = 8e-28, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 102/268 (38%), Gaps = 25/268 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDID---- 53 MQ + + +L + +N++N +T G++ V F + ++++ Sbjct: 1 MQNGYYQATGGMVTQFNKLDVITNNLANINTSGYKRDDVVIADFKRIFKETQDELPIENH 60 Query: 54 ----------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILT 101 +EY +GS +T LD A+ + F + L Sbjct: 61 TRDASRFVNTTIDGIPQVSQEYTDFSLGSLKATNNPLDLAMTREDAFYLVQTKDGEVRLA 120 Query: 102 RDGRFKVTDDGSLVSASGKYP-----VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156 +DG F++ D+G LV+ G + + I+IP +V + G I G A Sbjct: 121 KDGNFQLDDEGYLVNKQGYKVLSSDYFNNPQNAGIRIPNGAVQISVDKNGSIEVDGAQNA 180 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + + VD + + ++ + + + +++GF + SN N + EM +I Sbjct: 181 RLFVAQVDDIRALQKDGDNVYKIDDLTRIRDLKNSNAIRQGFSQGSNVNPVTEMVGLIEA 240 Query: 217 TQKFNSITTLIDEN-EKSMLEAIRNIAS 243 + ++ + + EAI +A+ Sbjct: 241 NRMVEMYQKVMTAHMDDLNQEAINKLAA 268 >gi|54297183|ref|YP_123552.1| flagellar basal body rod protein FlgF [Legionella pneumophila str. Paris] gi|53750968|emb|CAH12379.1| flagellar biosynthesis protein FlgF [Legionella pneumophila str. Paris] Length = 248 Score = 128 bits (320), Expect = 8e-28, Method: Composition-based stats. Identities = 52/247 (21%), Positives = 109/247 (44%), Gaps = 7/247 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS--F 58 M+ ++ + +R +A+N++N +T GF+ + + N +Q F Sbjct: 1 MEPILYKAVSGGRSDFKRQEMIANNLANINTPGFKADLYQAQTMYMNNANGNNQFNMHSF 60 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSA 117 + + G I+TG +LD A++GD W A++ + TR G ++ +G L++A Sbjct: 61 ITQNTNGVDTSPGEIITTGRDLDVAIDGDGWMAVQDSQGREAYTRGGSLRLNANGQLITA 120 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV---IATMGLYSVDMSQGFVRREN 174 SGK + D + I Q EI + G + +G V + V + + + + + Sbjct: 121 SGKVVLGDGGPISIPPAQSIEIGSDGTISIVPLEGDVKSLAILDRIKLVTLDRNNIYKND 180 Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 G+ + + ++ G LE SN N++ +M MI ++F++ L+ + + Sbjct: 181 EGLIQLRSGAATTNSNI-KLQSGALEGSNVNAIDQMVAMISAGREFDAQMKLLSTVDDNG 239 Query: 235 LEAIRNI 241 + + + Sbjct: 240 QKLAQLL 246 >gi|33596141|ref|NP_883784.1| flagellar basal body rod protein FlgF [Bordetella parapertussis 12822] gi|33601542|ref|NP_889102.1| flagellar basal body rod protein FlgF [Bordetella bronchiseptica RB50] gi|33573144|emb|CAE36791.1| flagellar basal-body rod protein FlgF [Bordetella parapertussis] gi|33575978|emb|CAE33057.1| flagellar basal-body rod protein FlgF [Bordetella bronchiseptica RB50] Length = 254 Score = 128 bits (320), Expect = 8e-28, Method: Composition-based stats. Identities = 65/253 (25%), Positives = 107/253 (42%), Gaps = 11/253 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + + + +NM+N +T GFR + V A + ++S VA Sbjct: 1 MDRIIYTAMNGAARIAEHQTVLGNNMANVNTPGFREQIALYRSVPMADGTSLPTRVSTVA 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 S + E+G+ ++TG ELD AL G WFAL++P+G TR G +V +G L +A+G+ Sbjct: 61 S-TPGNNFEMGNMMTTGRELDVALAGPGWFALQTPQGEAYTRAGALQVGVNGLLQTATGQ 119 Query: 121 YPVLDMASVPIQIPQKD----EIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + D +V Q V G ++ L V+ + + G Sbjct: 120 PVLSDQNAVIEVPDQASLTIASDGTVTAIGAGDPPNNILNLGRLKMVNPPPQQLVHGDDG 179 Query: 177 ISPN------IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + P PL + G LE SNA+ M M MI ++F +I E Sbjct: 180 VFRMPQQPGGQPAAPLPADPSQRLLSGVLEGSNASPMGAMVGMIQNARRFEMQMQVIREA 239 Query: 231 EKSMLEAIRNIAS 243 +K+ A +A+ Sbjct: 240 DKNAERANGILAA 252 >gi|294339842|emb|CAZ88205.1| putative flagellar basal-body rod protein FlgF [Thiomonas sp. 3As] Length = 245 Score = 128 bits (320), Expect = 8e-28, Method: Composition-based stats. Identities = 48/246 (19%), Positives = 101/246 (41%), Gaps = 9/246 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M T I A+ ++ + +N++N +T G+R + +F + + + ++ Sbjct: 1 MDT-LWIAATGARAVLRQQAVTTNNLANVNTTGYRGEQAQFRAL--PVYGNALPTSAYTT 57 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASG 119 + + G TG LD A+ G W A++ + TR+G +V+ G L ++ G Sbjct: 58 VQGNSANLQEGPINHTGRNLDVAIRGSGWIAVQATNGDTAYTRNGDLQVSASGILSTSDG 117 Query: 120 KYPVL----DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 + + ++ P++ Q + SQ ++ + V+ ++R Sbjct: 118 RPVLGQSGAPISVPPLESVQIGADGTISGVPVGSQPNALVVVNRIQLVNPPPAQMQRGAD 177 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 G+ + P V + G LE SN N + M Q++ T+ F T L+ +++ Sbjct: 178 GLFRDTQG-PAPADGNVQLAVGALEGSNVNPVQAMIQILDNTRAFEMQTKLMQTVDQNHQ 236 Query: 236 EAIRNI 241 A + + Sbjct: 237 AATQLL 242 >gi|187935622|ref|YP_001885067.1| flagellar basal body rod protein FlgG [Clostridium botulinum B str. Eklund 17B] gi|187723775|gb|ACD24996.1| flagellar hook-basal body complex protein FlhP [Clostridium botulinum B str. Eklund 17B] Length = 256 Score = 128 bits (320), Expect = 9e-28, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 100/248 (40%), Gaps = 16/248 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M F + A +++L +++++ NT T G++ V+FS+++ + Sbjct: 1 MFNIFANAQSGMNAYQEKLDYLSNDLVNTSTTGYKATDVQFSDLLTESLDRKGTPLVNKD 60 Query: 56 ---ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF-ALESPRGIILTRDGRFKVTDD 111 + V G +Y G+ ++TG + D A++G + +++ I TRDG K+ + Sbjct: 61 AINGTGVKLGMDYRKDTQGNLLTTGIKTDIAIDGKGYIASVQQDGTIAYTRDGNLKIDSN 120 Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV------IATMGLYSVDM 165 G+LV A G + + K ++ G+ KV + + +++ Sbjct: 121 GTLVDARGNKIYIQYEDGMSEGSPKLSSEDISIDGDGGISTKVDNQYVKVGQIPVFTAIG 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225 + FV + + + +++G LE SN ++ +I + F + Sbjct: 181 DKAFVA-IGNNYFVASDDAQIALSNDYNIEQGMLEGSNVDTSEIFTDIISTQRAFQLSSK 239 Query: 226 LIDENEKS 233 I ++ Sbjct: 240 GITTADEV 247 >gi|224437224|ref|ZP_03658201.1| flagellar distal rod protein FlgG [Helicobacter cinaedi CCUG 18818] gi|313143684|ref|ZP_07805877.1| flagellar distal rod protein FlgG [Helicobacter cinaedi CCUG 18818] gi|313128715|gb|EFR46332.1| flagellar distal rod protein FlgG [Helicobacter cinaedi CCUG 18818] Length = 277 Score = 128 bits (320), Expect = 9e-28, Method: Composition-based stats. Identities = 53/274 (19%), Positives = 107/274 (39%), Gaps = 32/274 (11%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 MQ+ + + RL +++N++N +T GF+ V + + + +Q Sbjct: 1 MQSGYYNTTGGMVTQFNRLDLISNNLANLNTTGFKRDDVVIGDYLRLFETHKEQLPIEDH 60 Query: 61 SGK-----------------EYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTR 102 + K EY + VGS T LDFAL+ +A+F +++P GI TR Sbjct: 61 TRKAAKFLNRTMNRVPIISEEYTDRSVGSLAQTDNPLDFALQRDNAFFVIKTPDGIRYTR 120 Query: 103 DGRFKVTDDGSLVSASGKYP-----------VLDMASVPIQIPQKDEIFNVGEKGEISQK 151 DG F + +DG LV+ G ++ + ++ ++ + + Sbjct: 121 DGNFNIDNDGHLVNKDGHLVLSRDGLDSQEGIIIPTGMYLESDNNGNLYLRNINNDAIAE 180 Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE--DLSGVTVKRGFLEDSNANSMYE 209 I + + + + + + + + +GFLE SN N++ E Sbjct: 181 QINIGALAVVGFENPRYLKKVGKNLYEYPQDRLDERDIMQNSAMIAQGFLEKSNVNAVLE 240 Query: 210 MGQMIHLTQKFNSITTLIDEN-EKSMLEAIRNIA 242 M +I + + + ++ + + EAI +A Sbjct: 241 MSSLIETNRLVDMYSKVMKSHMDDLNTEAITKLA 274 >gi|16080693|ref|NP_391521.1| flagellar basal-body rod protein [Bacillus subtilis subsp. subtilis str. 168] gi|221311597|ref|ZP_03593444.1| flagellar basal-body rod protein [Bacillus subtilis subsp. subtilis str. 168] gi|221315924|ref|ZP_03597729.1| flagellar basal-body rod protein [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320837|ref|ZP_03602131.1| flagellar basal-body rod protein [Bacillus subtilis subsp. subtilis str. JH642] gi|221325122|ref|ZP_03606416.1| flagellar basal-body rod protein [Bacillus subtilis subsp. subtilis str. SMY] gi|6648066|sp|P39752|FLHO_BACSU RecName: Full=Flagellar hook-basal body complex protein flhO gi|1763700|emb|CAB05950.1| flhO [Bacillus subtilis subsp. subtilis str. 168] gi|2636165|emb|CAB15657.1| putative flagellar basal-body rod protein [Bacillus subtilis subsp. subtilis str. 168] Length = 270 Score = 128 bits (320), Expect = 9e-28, Method: Composition-based stats. Identities = 48/272 (17%), Positives = 100/272 (36%), Gaps = 34/272 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVV----------GA 47 M +A +A ++R +++N++N +T G++ + F E++ G Sbjct: 1 MLKGLYTATSAMIAQQRRTEMLSNNIANANTSGYKADQGSMRAFPEMLLSRIESKSPAGT 60 Query: 48 IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA-------------WFALES 94 + +I + V + GS ST D AL + ++ +++ Sbjct: 61 SRTEIGSVNTGVYMQELKPLFTQGSLKSTDQPTDIALIENQVPMSAETNEKAALFYPVQT 120 Query: 95 PRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV 154 GI ++ F + ++ + ++ +G+ + I +E F V E G ++ G+ Sbjct: 121 ADGIRYSKSSTFSLNEN-NQLTINGRPILSTDRQP---ITVDNENFTVSENGTVTTNGRT 176 Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTV----KRGFLEDSNANSMYEM 210 + + + + R N S V K+G E SN + Sbjct: 177 AGQIDVRMAEDVRNLKRDGNDLYSTADGNDLPSAAGNNQVAYSLKQGVSELSNVDVTSAY 236 Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 +M + F + +I +KSM +A I Sbjct: 237 TEMTEAYRSFEANQKVIQAYDKSMDKAANEIG 268 >gi|208434303|ref|YP_002265969.1| flagellar basal-body rod protein [Helicobacter pylori G27] gi|208432232|gb|ACI27103.1| flagellar basal-body rod protein [Helicobacter pylori G27] Length = 269 Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 52/268 (19%), Positives = 97/268 (36%), Gaps = 26/268 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDID---- 53 MQ + A RL ++N++N +T GF+ F + + + Sbjct: 1 MQNGYYAATGAMATQFNRLDLTSNNLANLNTNGFKRDDAITGDFLRLYQQYREQLPLEDE 60 Query: 54 ----------QKISFVASGKEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTR 102 + Y + +G+F T LDFAL + +FA+++ G+ TR Sbjct: 61 TKASAKYLNRNLNRVPVLSEIYTDRSLGAFEETHNPLDFALTSPNLYFAIQTNEGVAYTR 120 Query: 103 DGRFKVTDDGSLVSASGKYP---VLDMASVPIQIPQKDEIFNVGEKGEISQKGK---VIA 156 DG F V DG LV+ +G I + I G + + Sbjct: 121 DGHFSVDKDGFLVTLNGFKVLSRSGLNEKGGIMLMPDAAIEVDQNGGITFRDNEAQIQAG 180 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + L S + + + + + +K+ LE SN N++ EM +I + Sbjct: 181 ALALVSFSEPKNLKKIGQNLYTYQGEGV-HQVSDSGALKQYMLEKSNVNAVREMSALIEI 239 Query: 217 TQKFNSITTLIDE-NEKSMLEAIRNIAS 243 + + + ++ + EAI +A+ Sbjct: 240 NRFLDMYSKVLKTHQDDMNAEAINKLAT 267 >gi|210134550|ref|YP_002300989.1| flagellar basal-body rod protein [Helicobacter pylori P12] gi|210132518|gb|ACJ07509.1| flagellar basal-body rod protein [Helicobacter pylori P12] Length = 269 Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 53/268 (19%), Positives = 98/268 (36%), Gaps = 26/268 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDID---- 53 MQ + A RL ++N++N +T GF+ F + + + Sbjct: 1 MQNGYYAATGAMATQFNRLDLTSNNLANLNTNGFKRDDAITGDFLRLYQQYREQLPLEDQ 60 Query: 54 ----------QKISFVASGKEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTR 102 + Y K +G+F T LDFAL + +FA+++ G+ TR Sbjct: 61 TKASAKYLNRNLNRVPILSEIYTDKSLGAFEETHNPLDFALTSPNLYFAIQTNEGVAYTR 120 Query: 103 DGRFKVTDDGSLVSASGKYP---VLDMASVPIQIPQKDEIFNVGEKGEISQKGK---VIA 156 DG F V DG LV+ +G I + EI G + + Sbjct: 121 DGHFSVDKDGFLVTLNGFRVLSRSGLNEKGGIMLMPDAEIEVDQNGGITFRDNEAQIQAG 180 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + L S + + + + + +++ LE SN N++ EM +I + Sbjct: 181 ALALVSFSEPKNLKKIGQNLYTYQGEGV-HQVSDSGALRQYMLEKSNVNAVREMSALIEI 239 Query: 217 TQKFNSITTLIDE-NEKSMLEAIRNIAS 243 + + + ++ + EAI +A+ Sbjct: 240 NRFLDMYSKVLKTHQDDMNAEAINKLAT 267 >gi|108562780|ref|YP_627096.1| flagellar basal-body rod protein [Helicobacter pylori HPAG1] gi|107836553|gb|ABF84422.1| flagellar basal-body rod protein [Helicobacter pylori HPAG1] Length = 269 Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 53/268 (19%), Positives = 98/268 (36%), Gaps = 26/268 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDID---- 53 MQ + A RL ++N++N +T GF+ F + + + Sbjct: 1 MQNGYYAATGAMATQFNRLDLTSNNLANLNTNGFKRDDAITGDFLRLYQQYREQLPLEDQ 60 Query: 54 ----------QKISFVASGKEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTR 102 + Y + +G+F T LDFAL + +FA+++ G+ TR Sbjct: 61 TKASAKYLNRNLNRVPILSEIYTDRSLGAFEGTNNPLDFALTSPNLYFAIQTNEGVAYTR 120 Query: 103 DGRFKVTDDGSLVSASGKYP---VLDMASVPIQIPQKDEIFNVGEKGEISQKGK---VIA 156 DG F V DG LV+ +G I + EI G + + Sbjct: 121 DGHFSVDKDGFLVTLNGFRVLSRSGLNEKGGIMLMPDAEIEVDQNGGITFRDNEAQIQAG 180 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + L S + + + + + +++ LE SN N++ EM +I + Sbjct: 181 ALALVSFSEPKNLKKIGQNLYTYQGEGI-HQVSDSGALRQYMLEKSNVNAVREMSALIEI 239 Query: 217 TQKFNSITTLIDE-NEKSMLEAIRNIAS 243 + + + ++ + EAI +AS Sbjct: 240 NRFLDMYSKVLKTHQDDMNAEAINKLAS 267 >gi|329928728|ref|ZP_08282577.1| flagellar hook-basal body protein [Paenibacillus sp. HGF5] gi|328937509|gb|EGG33927.1| flagellar hook-basal body protein [Paenibacillus sp. HGF5] Length = 296 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 44/290 (15%), Positives = 101/290 (34%), Gaps = 49/290 (16%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRT---IKVKFSEVVGAIKND------- 51 + + EQR +TV N++N +T G++ ++ F EV+ ++ Sbjct: 5 LRGLYTAASGMMTQEQRHNTVTQNIANVNTTGYKATNSVQRSFPEVLVSMIGGNESSNAG 64 Query: 52 --IDQKISFVASGKEYLSKEVGSFISTGTELDFAL------------------------- 84 + + + V + + G+ T DFAL Sbjct: 65 RKLGKFNTGVYAEESISLYTEGALRETNKTTDFALVSSFTVQNPATGQAYPFDASGRYVD 124 Query: 85 --------EGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQK 136 + + TR+G F+V+ +G+L+S SG + + + Sbjct: 125 ENGEVIYRPEGFFTVQNENGDVRYTRNGSFRVSPEGNLLSESGYQVLDNNNRPIVLTGPA 184 Query: 137 DEIFNVGEKGEISQKGKVIATM-GLYSVDMSQGFVRRENSGIS---PNIPPTPLEDLSGV 192 + + + G+ + G+ V G +R + P+ + Sbjct: 185 SDFTVNEQGEIMDAAGRGTGIILGVSIVSQPHGLIREGHGVFRMADPDGEVRFMTPADNG 244 Query: 193 TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 V++GF+E SN + M ++ + + + ++ ++++ +A+ I Sbjct: 245 VVRQGFIEGSNVDPTQSMVELTAALRAYETNQKIVQYYDRTLEKAVNEIG 294 >gi|296282278|ref|ZP_06860276.1| flagellar basal-body rod protein FlgF [Citromicrobium bathyomarinum JL354] Length = 246 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 46/243 (18%), Positives = 83/243 (34%), Gaps = 6/243 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M L+ A R +A NM+NTDT+GFR ++ + I+ ++ S Sbjct: 1 MDRLIYTALSGMQASMDRQRAIASNMANTDTLGFRAELIEQRAM--TIEGHPNEARSMQV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G I TG +LD A+ + A+++ TR G ++ G LV+ G Sbjct: 59 ARVTGADMTGGEVIETGRDLDLAIATKSLMAVQADDGTEAYTRRGDLSISATGLLVTGDG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ---GFVRRENSG 176 + D + + + I G + + ++ + + G Sbjct: 119 HPVLGDTGPITVPPGGRISISEDGTVTRSDPDAPEAPPAEVGRIKLASWEGSPIAKGLDG 178 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + L V G LE SN + MI + F + L+ + Sbjct: 179 LFRVEGGGILPLDEEARVHSGALEQSNVKPTEVLVAMIEEQRLFAMRSKLVSTARQLDES 238 Query: 237 AIR 239 + Sbjct: 239 GAQ 241 >gi|26991075|ref|NP_746500.1| flagellar basal body rod protein FlgF [Pseudomonas putida KT2440] gi|24986109|gb|AAN69964.1|AE016634_13 flagellar basal-body rod protein FlgF [Pseudomonas putida KT2440] Length = 246 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 46/246 (18%), Positives = 93/246 (37%), Gaps = 9/246 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A+N++N T GF+ + + + D +F Sbjct: 1 MDKLLYVAMTGASQNALAQKAHANNLANISTNGFQRDLEQARSM--PVFGDSFPARAFAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + G + TG +LD A+ G + A+++P R G + G L + +G Sbjct: 59 TERPATDFSEGPLVETGRDLDVAVTGKGFIAVQAPDGSEAYVRTGSLNIDALGVLRAGNG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV---IATMGLYSVDMSQGFVRRENSG 176 + + + I QK E+ G S + V+ + + G Sbjct: 119 MPVIGNGGPIAIPPEQKVEVGADGTISIRSMGEDPRVMAEVDRIKLVNPDTKGLTKGLDG 178 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN---EKS 233 + P + V V GFLE SN N++ EM ++ L+++F +++ +++ Sbjct: 179 LIHTTSGQPADADVNVRVVAGFLEGSNVNAVEEMTSVLALSRQFELHVKMMNTAKEGDEA 238 Query: 234 MLEAIR 239 M ++ Sbjct: 239 MARVLQ 244 >gi|188527163|ref|YP_001909850.1| flagellar basal-body rod protein (flgG) [Helicobacter pylori Shi470] gi|188143403|gb|ACD47820.1| flagellar basal-body rod protein (flgG) [Helicobacter pylori Shi470] Length = 269 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 50/268 (18%), Positives = 100/268 (37%), Gaps = 26/268 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDID---- 53 MQ + A A RL ++N++N +T GF+ F + + + Sbjct: 1 MQNGYYAATGAMAAQFNRLDLTSNNLANLNTNGFKRDDAVTGDFLRLYQQYREQLPLEDQ 60 Query: 54 ----------QKISFVASGKEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTR 102 + Y + +G+F T LDFAL + +FA+++ G+ TR Sbjct: 61 TKASAKYLNRNLNRVPILSEIYTDRSLGAFEETHNPLDFALTSPNLYFAIQTNEGVAYTR 120 Query: 103 DGRFKVTDDGSLVSASGKYP------VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156 DG F V DG LV+ +G + + + + N ++ Sbjct: 121 DGHFSVDKDGFLVTLNGFRVLSRSGLNEKGGIMLMPNAEIEVNQNGEITFRDNEAPIQAG 180 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + L S + + + + + ++++ LE SN N++ EM +I + Sbjct: 181 ALALVSFSEPKNLKKIGQNLYTYQGEGV-HQISDSGSLRQYMLEKSNVNAVREMSALIGI 239 Query: 217 TQKFNSITTLIDE-NEKSMLEAIRNIAS 243 + + + ++ + EAI +A+ Sbjct: 240 NRFLDMYSKVLKTHQDDMNAEAINKLAA 267 >gi|254779049|ref|YP_003057154.1| Flagellar basal-body rod protein FlgG (Distal rod protein) [Helicobacter pylori B38] gi|254000960|emb|CAX28904.1| Flagellar basal-body rod protein FlgG (Distal rod protein) [Helicobacter pylori B38] Length = 269 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 53/268 (19%), Positives = 97/268 (36%), Gaps = 26/268 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDID---- 53 MQ + A RL ++N++N +T GF+ F + + + Sbjct: 1 MQNGYYAATGAMATQFNRLDLTSNNLANLNTNGFKRDDAITGDFLRLYQQYREQLPLEDQ 60 Query: 54 ----------QKISFVASGKEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTR 102 + Y + +G+F T LDFAL + +FA+++ G+ TR Sbjct: 61 TKASAKYLNRNLNRVPILSEIYTDRSLGAFEGTNNPLDFALTSPNLYFAIQTNEGVAYTR 120 Query: 103 DGRFKVTDDGSLVSASGKYP---VLDMASVPIQIPQKDEIFNVGEKGEISQKGK---VIA 156 DG F V DG LV+ +G I + EI G + + Sbjct: 121 DGHFSVDKDGFLVTLNGFKVLSRSGLNEKGGIMLMPDAEIEVDQNGGITFRDNEAQIQAG 180 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + L S + + + + +K+ LE SN N++ EM +I + Sbjct: 181 ALALVSFSEPKNLKKIGQNLYIYQGEGV-HQVSDSGALKQYMLEKSNVNAVREMSALIEI 239 Query: 217 TQKFNSITTLIDE-NEKSMLEAIRNIAS 243 + + + ++ + EAI +A+ Sbjct: 240 NRFLDMYSKVLKTHQDDMNAEAINKLAT 267 >gi|321313188|ref|YP_004205475.1| flagellar basal-body rod protein [Bacillus subtilis BSn5] gi|320019462|gb|ADV94448.1| flagellar basal-body rod protein [Bacillus subtilis BSn5] Length = 270 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 48/272 (17%), Positives = 103/272 (37%), Gaps = 34/272 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVV----------GA 47 M +A +A ++R +++N++N +T G++ + F E++ G Sbjct: 1 MLKGLYTATSAMIAQQRRTEMLSNNIANANTSGYKADQGSMRAFPEMLLSRIESKSPAGT 60 Query: 48 IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA-------------WFALES 94 + +I + V + GS ST D AL + ++ +++ Sbjct: 61 SRTEIGSVNTGVYMQELKPLFTQGSLKSTDQPTDIALIENQVPMNAETNEKAALFYPVQT 120 Query: 95 PRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV 154 GI ++ F + ++ + ++ +G+ + I +E F V E G ++ G+ Sbjct: 121 AGGIRYSKSSTFSLNEN-NQLTINGRPILSTDRQP---ITVDNENFTVSENGTVTTNGRT 176 Query: 155 IATMGLYSVDMSQGFVRRENSGISPNI----PPTPLEDLSGVTVKRGFLEDSNANSMYEM 210 + + + + R N S P + ++K+G E SN + Sbjct: 177 AGQIDIRMAEDVRNLKRDGNDLYSTADGNDLPSAAGNNQVSYSLKQGVSELSNVDVTSAY 236 Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 +M + F + +I +KSM +A I Sbjct: 237 TEMTEAYRSFEANQKVIQAYDKSMDKAANEIG 268 >gi|313497763|gb|ADR59129.1| Flagellar basal body rod protein FlgF [Pseudomonas putida BIRD-1] Length = 246 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 46/246 (18%), Positives = 93/246 (37%), Gaps = 9/246 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A+N++N T GF+ + + + D +F Sbjct: 1 MDKLLYVAMTGASQNALAQKAHANNLANISTNGFQRDLEQARSM--PVFGDSFPARAFAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + G + TG +LD A+ G + A+++P R G + G L + +G Sbjct: 59 TERPATDFSEGPLVETGRDLDVAVTGKGFVAVQAPDGSEAYVRTGSLNIDALGVLRAGNG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV---IATMGLYSVDMSQGFVRRENSG 176 + + + I QK E+ G S + V+ + + G Sbjct: 119 MPVIGNGGPIAIPPEQKVEVGADGTISIRSMGEDPRVMAEVDRIKLVNPDTKGLTKGLDG 178 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN---EKS 233 + P + V V GFLE SN N++ EM ++ L+++F +++ +++ Sbjct: 179 LIHTTSGQPADADVNVRVVAGFLEGSNVNAVEEMTSVLALSRQFELHVKMMNTAKEGDEA 238 Query: 234 MLEAIR 239 M ++ Sbjct: 239 MARVLQ 244 >gi|326404070|ref|YP_004284152.1| flagellar basal-body rod protein FlgF [Acidiphilium multivorum AIU301] gi|325050932|dbj|BAJ81270.1| flagellar basal-body rod protein FlgF [Acidiphilium multivorum AIU301] Length = 247 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 55/245 (22%), Positives = 104/245 (42%), Gaps = 8/245 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFR----TIKVKFSEVVGAIKNDIDQKI 56 MQ + I L+ L + + +A+N++N T G+ + + Sbjct: 1 MQNTSTIILSRMLTASRNVDVIANNIANVSTPGYESMHLASTTWLDHMRNVTAPPGGSTL 60 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVS 116 ++ S + + G+ +TG LD AL G +F +++P G LTRDG+F + DG++ + Sbjct: 61 AYTQSNGTWRDERPGAIRNTGNALDLALPGGGYFTVQTPNGPRLTRDGQFNLMPDGTIAN 120 Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 A+G L PI +P + + G IS +I +G+ +V Q + + Sbjct: 121 ANGYSL-LSTNGQPITVPPQSGTLTIAADGTISTPQGIIGQVGVVTVPDQQSLTAQGRNL 179 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + P P + +G +E+SN + E+ MI ++ + + + + Sbjct: 180 FKASTTPIP---DPNPQIVQGAIEESNVQPVVEITNMIQASRNYEMLAQFLASEKNRSQT 236 Query: 237 AIRNI 241 AI I Sbjct: 237 AISQI 241 >gi|308071138|ref|YP_003872743.1| flagellar basal body rod protein [Paenibacillus polymyxa E681] gi|305860417|gb|ADM72205.1| Flagellar basal body rod protein [Paenibacillus polymyxa E681] Length = 275 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 51/276 (18%), Positives = 102/276 (36%), Gaps = 34/276 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S + + +++QRL +ADN++N +TVG+++ + F +V+ ++ Sbjct: 1 MNNSMIGAMVSMASVQQRLDLIADNIANINTVGYKSKQGSFEDVLANVQQQPSTYLQNGR 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107 V + + E G TG D A++G+A F ++ TRDG F Sbjct: 61 AMPLGYNLGYGVKTAAIMKNMEQGPLKETGLPTDLAIQGNAMFEVQGNGQKAWTRDGSFH 120 Query: 108 V------TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL- 160 + L +A G + + + + I G T+G Sbjct: 121 FVPDPNDSATMMLTTAEGYSVLDNNDVPVTAPAGSKVAISSDGELLIRANGTGAPTVGQR 180 Query: 161 ---YSVDMSQGFVRRENSGI----------SPNIPPTPLEDLSGVTVKRGFLEDSNANSM 207 V +G +R+++ + V+V+ G+LE+SN + Sbjct: 181 IKLMDVQRPEGLEQRDDNLFVLLNGVTEANVFGAAGVAGAVPADVSVRSGYLEESNVDLA 240 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 EM M+ + + + + ++ M N+ + Sbjct: 241 GEMTDMMQVQRMYQMAARALTSSDTMM-NLANNLRA 275 >gi|317012196|gb|ADU82804.1| flagellar basal-body rod protein [Helicobacter pylori Lithuania75] Length = 269 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 53/268 (19%), Positives = 99/268 (36%), Gaps = 26/268 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDID---- 53 MQ + A RL ++N++N +T GF+ F + + + Sbjct: 1 MQNGYYAATGAMATQFNRLDLTSNNLANLNTNGFKRDDAITGDFLRLYQQYREQLPLEDQ 60 Query: 54 ----------QKISFVASGKEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTR 102 + Y + +G+F T LDFAL + +FA+++ G+ TR Sbjct: 61 TKASAKYLNRNLNRVPILSEIYTDRSLGAFEGTHNPLDFALTSPNLYFAIQTNEGVAYTR 120 Query: 103 DGRFKVTDDGSLVSASGKYP---VLDMASVPIQIPQKDEIFNVGEKGEISQKGK---VIA 156 DG F V DG LV+ +G I + EI G + + Sbjct: 121 DGHFSVDKDGFLVTLNGFKVLSRSGLNEKGGIMLMPDAEIEVDQNGGITFRDNEAQIQAG 180 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + L S + + + + + + +K+ LE SN N++ EM +I + Sbjct: 181 ALALVSFSEPKNLKKIGQNLYTYQGEGV-HQVSNSGALKQYMLEKSNVNAVREMSALIEI 239 Query: 217 TQKFNSITTLIDE-NEKSMLEAIRNIAS 243 + + + ++ + EAI +A+ Sbjct: 240 NRFLDMYSKVLKTHQDDMNAEAINKLAT 267 >gi|212640498|ref|YP_002317018.1| flagellar hook-basal body protein [Anoxybacillus flavithermus WK1] gi|212561978|gb|ACJ35033.1| Flagellar hook-basal body protein [Anoxybacillus flavithermus WK1] Length = 274 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 49/275 (17%), Positives = 98/275 (35%), Gaps = 33/275 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S L+Q+L ++ N++N +T GF+ F E++ ++ Sbjct: 1 MLRSMITAANTMNQLQQQLDVISHNIANVNTTGFKKRDAVFGELLAQQFTNLPTTDEAPR 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGD-AWFALESPRGIILTRDGRF 106 Y+ + GS + T LD AL + +F + I TRDG F Sbjct: 61 LTPAGVRLGVGAKVASTYMQMKQGSVVKTDRPLDLALTKEGQFFRIFVDGAIQYTRDGAF 120 Query: 107 KVTDDGS-----LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLY 161 ++ + ++ + Y VL+ PI + + V + G + M Sbjct: 121 YLSPSANNPDELMIVTADGYAVLNENDEPITVRDGFKDIQVTQNGTMQFIAPNGNIMQTV 180 Query: 162 SVDMS----QGFVRRENSGISPNIPPTPLEDL---------SGVTVKRGFLEDSNANSMY 208 ++ +S ++ +ED + +++++ LE SN Sbjct: 181 NIGVSYITRPQLMQALGDNRFAFPNGLNVEDATINLAGNNRNNISLQQYALEQSNVELAT 240 Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 EM +++ + + I +++ M I I S Sbjct: 241 EMSELMITQRSYQLNARAITLSDQMMG-LINGIRS 274 >gi|192290682|ref|YP_001991287.1| flagellar basal body rod protein [Rhodopseudomonas palustris TIE-1] gi|192284431|gb|ACF00812.1| flagellar basal body rod protein [Rhodopseudomonas palustris TIE-1] Length = 244 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 59/224 (26%), Positives = 101/224 (45%), Gaps = 6/224 (2%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND---IDQKISFVASGK 63 IGL+ +AL+Q++ +A N++N +T GF+ ++F E + K + + Sbjct: 7 IGLSRLIALQQQVDNLARNVANQNTTGFKREGIRFLEYLTDAKEADDIPSAPKRSLVAVT 66 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPV 123 Y GS TG D A+ D +F + + RG TR+G F + G LV+ SG + Sbjct: 67 GYTDFSAGSLQLTGNSTDAAVLEDGFFVVRTSRGDRYTRNGAFTLDKQGRLVTLSGDLVL 126 Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183 A+ I++P D ++G G IS +I + + D + V + PP Sbjct: 127 --AANGTIKVPLTDLNLSIGTDGTISTARSIIGRLRVVKFDDPRSLVAEGTGLFASGSPP 184 Query: 184 TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 L S + LE SN NS+ EM ++ T+ + + ++ Sbjct: 185 IELNAGSI-RLATNALERSNVNSIREMSDLVAATRAYEQVANVV 227 >gi|167034942|ref|YP_001670173.1| flagellar basal body rod protein FlgF [Pseudomonas putida GB-1] gi|166861430|gb|ABY99837.1| flagellar basal-body rod protein FlgF [Pseudomonas putida GB-1] Length = 246 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 46/246 (18%), Positives = 93/246 (37%), Gaps = 9/246 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A+N++N T GF+ + + + D +F Sbjct: 1 MDKLLYVAMTGASQNALAQKAHANNLANISTNGFQRDLEQARSM--PVFGDSFPARAFAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + G + TG +LD A+ G + A+++P R G + G L + +G Sbjct: 59 TERPATDFSEGPLVETGRDLDVAVTGKGFIAVQAPDGSEAYVRTGSLNIDALGVLRAGNG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV---IATMGLYSVDMSQGFVRRENSG 176 + + + I QK E+ G S + V+ + + G Sbjct: 119 MPVMGNGGPIAIPPEQKVEVGADGTISIRSMGEDPRVMAEVDRIKLVNPDTKGLTKGLDG 178 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN---EKS 233 + P + V V GFLE SN N++ EM ++ L+++F +++ +++ Sbjct: 179 LIHTTSGQPADADVNVRVVAGFLEGSNVNAVEEMTSVLALSRQFELHVKMMNTAKEGDEA 238 Query: 234 MLEAIR 239 M ++ Sbjct: 239 MARVLQ 244 >gi|218288303|ref|ZP_03492602.1| protein of unknown function DUF1078 domain protein [Alicyclobacillus acidocaldarius LAA1] gi|218241662|gb|EED08835.1| protein of unknown function DUF1078 domain protein [Alicyclobacillus acidocaldarius LAA1] Length = 301 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 54/297 (18%), Positives = 98/297 (32%), Gaps = 58/297 (19%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50 M S N ++ A + L V +N++N +TVGF+ V+F++++ + Sbjct: 1 MLRSMNSAISGMQAFQTDLDVVGNNIANVETVGFKQSDVQFADLLSQTMSLGTAGTSPST 60 Query: 51 ------------DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98 + +Q V + G +TG + A++G+ +F + Sbjct: 61 GGSGATTGIGGTNPEQVGLGVQVAATQMDMSQGPDETTGVPTNVAIQGNGFFVVTDGTST 120 Query: 99 ILTRDGRFKVTDDGSLVSASG------------------------------KYPVLDMAS 128 LTR G F V G+LV +G + + Sbjct: 121 YLTRAGNFSVDSAGNLVLPNGVIAEGYSSSSKPSSASTTQPTTEINVYQLAGVTLGSGNT 180 Query: 129 VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP----- 183 V D + KVI + L V QG V ++ S + P Sbjct: 181 VSNVSIGSDGSITATITNGTTTTTKVIGYLALAQVPNPQGLVSVGDNLFSASSPAAGQPT 240 Query: 184 -TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + T+ G LE SN + + +MI + + T +I + + + Sbjct: 241 YWTPGQGTYGTLASGELEGSNVDLSQQFAEMIVAQNAYVANTHMIGTDNAILQALVN 297 >gi|153940920|ref|YP_001391955.1| flagellar hook protein flgE [Clostridium botulinum F str. Langeland] gi|152936816|gb|ABS42314.1| flagellar hook protein flgE [Clostridium botulinum F str. Langeland] gi|295319974|gb|ADG00352.1| flagellar hook protein flgE [Clostridium botulinum F str. 230613] Length = 345 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 47/342 (13%), Positives = 97/342 (28%), Gaps = 103/342 (30%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50 M S G++ A + +L V +N++N +T F++ ++F +++ + Sbjct: 1 MLRSMYSGISGLKAQQTKLDIVGNNIANANTTAFKSQSIRFQDMLSQNMSSATGPSANLG 60 Query: 51 --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP------------- 95 + Q V Y G+ +TG LD A++G +F + Sbjct: 61 GTNPRQVGLGVQVAGIYTKFTTGNMQTTGRNLDMAVDGPGFFIVGKGDITSQTSIITEAT 120 Query: 96 --------------RGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFN 141 I TRDG F + D+G+L+++ G + + + Sbjct: 121 GDAQAGSIDGKSSTMDISFTRDGSFTLDDEGNLLTSDGFRIMGYAMTDGTGTSLAYDAGT 180 Query: 142 VGEKGEI---------------------------------------------------SQ 150 K + Sbjct: 181 GEAKMAFVDADSKALKAADDSKKLIPLRIPDEIDVDGKKVRVQSFSIDKDGLLVASLVNG 240 Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIP-------------PTPLEDLSGVTVKRG 197 K + + + S G + + + D + G Sbjct: 241 KSAALGQVAMASFKNEGGLEKMGKNLYKNSANSGEAIIRTPRGTAEENRNDKGYGDMLNG 300 Query: 198 FLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +E SN + E +MI + F + +I ++ + E + Sbjct: 301 MIEMSNVDLAEEFTEMIVANRAFQACGKMITTGDEILQELVN 342 >gi|330502735|ref|YP_004379604.1| flagellar basal body rod protein FlgF [Pseudomonas mendocina NK-01] gi|328917021|gb|AEB57852.1| flagellar basal body rod protein FlgF [Pseudomonas mendocina NK-01] Length = 246 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 48/237 (20%), Positives = 89/237 (37%), Gaps = 6/237 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + L A+N++N T GFR + + + + F Sbjct: 1 MDKMLYVSMTGAQNNTMGLRAHANNLANVSTSGFRRDFEQARSM--PLFGESYPARVFAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 S + GS TG +LD A+ G W A+++P R + G L + +G Sbjct: 59 SERPATDFRPGSLQETGRDLDVAVGGKGWIAVQAPDGSEAYVRTASLNIDALGMLRTGNG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEIS---QKGKVIATMGLYSVDMSQGFVRRENSG 176 + + + + QK EI G + + + V+ + + G Sbjct: 119 LPVMGNAGPIAVPPEQKVEIGQDGTISIRALGENPNVLAEVDRIKLVNPDPKSMEKGTDG 178 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 + +E + V V GFLE SN N++ EM ++ L+++F ++ E + Sbjct: 179 LIRVKGQPEVEADATVQVTSGFLEASNVNAVEEMTAILSLSRQFELSVKMMRTAEDN 235 >gi|308175373|ref|YP_003922078.1| flagellar hook-basal body protein [Bacillus amyloliquefaciens DSM 7] gi|307608237|emb|CBI44608.1| putative flagellar hook-basal body protein [Bacillus amyloliquefaciens DSM 7] gi|328555347|gb|AEB25839.1| flagellar basal body rod protein FlgG [Bacillus amyloliquefaciens TA208] Length = 273 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 55/274 (20%), Positives = 104/274 (37%), Gaps = 33/274 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M S A L+Q++ TV+ N+SN+DT G++ +FSE++ + ID K Sbjct: 1 MLRSMLAASTALNQLQQQMDTVSSNLSNSDTTGYKARDSRFSELIRQQYDQIDDKKENSP 60 Query: 61 SGKEYLS---------------KEVGSFISTGTELDFALEGDA-WFALESPRGIILTRDG 104 + ++ GS T +LD A + E+ + TRDG Sbjct: 61 NMRKTPPGLRLGAGAMMTPQLDSGQGSIKKTDRDLDIAFTSPYQYLQAEAGGRRVYTRDG 120 Query: 105 RFKVTDDGS-----LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV----- 154 + G + +G P+LD PIQI + + G ++ + Sbjct: 121 SLTLKPAGGNDRLLQLMTAGGNPILDENGQPIQIDSSLTKLKISKTGTLTASDQTGTRSQ 180 Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPT------PLEDLSGVTVKRGFLEDSNANSMY 208 +G+ +V+ Q ++ S N + +++G LE+SN + Sbjct: 181 TFNLGIVNVNNPQELHAEGDNLFSVNGTGASAIEELTGAKRQEIGMEQGALENSNVDMSK 240 Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 EM +I + + + I ++ + I ++ Sbjct: 241 EMTDLIVSQRSYQLNSRTITLGDQMLG-LINSVR 273 >gi|266621944|ref|ZP_06114879.1| flagellar basal-body rod protein FlgG [Clostridium hathewayi DSM 13479] gi|288866378|gb|EFC98676.1| flagellar basal-body rod protein FlgG [Clostridium hathewayi DSM 13479] Length = 246 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 54/249 (21%), Positives = 97/249 (38%), Gaps = 12/249 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIK---VKFSEVVGAIKNDIDQKIS 57 M + F + L ++ L+ A+N++N T G+R+ + F E + N I Sbjct: 1 MFSGFYTAASGVLMNQRALNISANNIANVKTSGYRSKRLVKTTFDEQLVRQMNGQTTAIG 60 Query: 58 FVAS----GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113 ++ +E + G+ + TG D A+ GD F ++ LTR+G F +DG Sbjct: 61 GGSTISLAEREMTTHRQGALVDTGKNFDMAISGDGLFVIQGEDRQYLTRNGHFTQDEDGY 120 Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRE 173 LV + D I ++ F VGE G I V + + Sbjct: 121 LVLKGVGQVMGDG----GPIQVEEGGFRVGENGIIYDNENGELEQIQIVVPDNYDNLTFY 176 Query: 174 NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 ++G L + V +G LE+S N EM + + + + F S + + ++ Sbjct: 177 DNGTYGAENGVALTQV-YPEVFQGKLEESGVNLNSEMTRAMEVQRAFQSCSRALTIIDQM 235 Query: 234 MLEAIRNIA 242 ++ I Sbjct: 236 NQKSASEIG 244 >gi|326386931|ref|ZP_08208545.1| Flagellar basal-body rod FlgF [Novosphingobium nitrogenifigens DSM 19370] gi|326208611|gb|EGD59414.1| Flagellar basal-body rod FlgF [Novosphingobium nitrogenifigens DSM 19370] Length = 247 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 40/240 (16%), Positives = 83/240 (34%), Gaps = 6/240 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + A + +A+NM+N+ T GFR + + ++K + + Sbjct: 1 MDRLIYTAYSGMSASMVQQRVIANNMANSQTTGFRAEML--AATPVSLKGSGLEARAMTD 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASG 119 + S + G TG LD A GD A++ TR G +G LV+ Sbjct: 59 AEVRGASMKQGEMTQTGNPLDVAFNGDTMMAVQARDGTEAYTRRGDLTADANGMLVNGDN 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ---GFVRRENSG 176 + + + + + K I G + + ++ + + G Sbjct: 119 APVLGESGPITVPLGSKLTISPDGTVLANDPANPDQPPNAVGRIKLASYTGSQIEKGLDG 178 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + + L + G LE SN + + +M+ + F+ T ++ ++ + Sbjct: 179 LFRVVGGGALPADENAKLVSGALEKSNVDPTSVLVEMVEAQRLFDMRTKVVSTARENDEK 238 >gi|317013797|gb|ADU81233.1| flagellar basal-body rod protein [Helicobacter pylori Gambia94/24] Length = 269 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 52/268 (19%), Positives = 100/268 (37%), Gaps = 26/268 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 MQ + A RL ++N++N +T GF+ + + + +Q Sbjct: 1 MQNGYYAATGAMATQFNRLDLTSNNLANLNTNGFKRDDAITGDFLRLYQEYREQLPLEDQ 60 Query: 61 SG-----------------KEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTR 102 + + Y + +G+F T LDFAL + +FA+++ G+ TR Sbjct: 61 TKASAKYLNRNLNRVPILSEIYTDRSLGAFEGTNNPLDFALTSPNLYFAIQTNEGVAYTR 120 Query: 103 DGRFKVTDDGSLVSASGKYP---VLDMASVPIQIPQKDEIFNVGEKGEISQKGK---VIA 156 DG F V DG LV+ +G I + EI G + + Sbjct: 121 DGHFSVDKDGFLVTLNGFKVLSRSGLNEKGGIMLMPDAEIEVDQNGGITFRDNEAQIQAG 180 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + L S + + + + + +++ LE SN N++ EM +I + Sbjct: 181 ALALVSFSEPKNLKKIGQNLYTYQGEGI-HQVSDSGALRQSMLEKSNVNAVREMSALIEI 239 Query: 217 TQKFNSITTLIDE-NEKSMLEAIRNIAS 243 + + + ++ + EAI +A+ Sbjct: 240 NRFLDMYSKVLKTHQDDMNAEAINKLAT 267 >gi|170737039|ref|YP_001778299.1| flagellar basal-body rod protein FlgF [Burkholderia cenocepacia MC0-3] gi|169819227|gb|ACA93809.1| flagellar basal-body rod protein FlgF [Burkholderia cenocepacia MC0-3] Length = 241 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 52/242 (21%), Positives = 92/242 (38%), Gaps = 5/242 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + L+ A+N+SN T GFR + A + Sbjct: 1 MDNFLYTAMTGAEHSLRALNVRANNLSNAQTSGFRADLASVTS--QAARGYGYDSRYHAT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 +++ E G TG LD A++G + A+E+ +G+ TR G + DG ++ +G Sbjct: 59 LTSTHVNPEPGKISETGRTLDVAIDGGGYLAVETAQGVAYTRAGALTLDGDG-ALTLNGN 117 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ-GFVRRENSGISP 179 + + + + I G ++ K I G + + + G+ Sbjct: 118 AVLGEGGPIVLPEHDALTIGADGTISVVTAGEKDIQDAGRLLLVNPDPADLVKNAQGLIV 177 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + T VTVK G LE SN +++ EM Q + LT+ F L ++ A Sbjct: 178 SRTGTDYAADDSVTVKGGHLEASNVSAVEEMMQTMSLTRSFEMQMKLYKVADEMAD-AGN 236 Query: 240 NI 241 + Sbjct: 237 RL 238 >gi|317010632|gb|ADU84379.1| flagellar basal-body rod protein [Helicobacter pylori SouthAfrica7] Length = 269 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 54/268 (20%), Positives = 98/268 (36%), Gaps = 26/268 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDID---- 53 MQ + A RL ++N++N +T GF+ F + + + Sbjct: 1 MQNGYYAVAGAMATQFNRLDLTSNNLANLNTNGFKRDDTITGDFLRLYQQYREQLPLEDQ 60 Query: 54 ----------QKISFVASGKEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTR 102 + Y K +G+F T LDFAL + +FA+++ GI TR Sbjct: 61 TKASAKYLNRNLNRVPILSEIYTDKSLGAFEETHNPLDFALTSPNLYFAIQTNEGIAYTR 120 Query: 103 DGRFKVTDDGSLVSASGKYP---VLDMASVPIQIPQKDEIFNVGEKG---EISQKGKVIA 156 DG F V DG LV+ +G I + EI G ++ Sbjct: 121 DGHFSVDKDGFLVTLNGFKVLSRSGLNEQGGIMLMPNAEIEVDQNGGITFRDNEAPIQAG 180 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + L S + + + + + +++ LE SN N++ EM +I + Sbjct: 181 ALALVSFSEPKNLKKIGQNLYAYQGEGI-HQVSDSGALRQYMLEKSNVNAVREMSTLIEI 239 Query: 217 TQKFNSITTLIDE-NEKSMLEAIRNIAS 243 + + + ++ + EAI +A+ Sbjct: 240 NRFLDMYSKVLKTHQDDMNAEAINKLAT 267 >gi|104782841|ref|YP_609339.1| flagellar basal body rod protein FlgF [Pseudomonas entomophila L48] gi|95111828|emb|CAK16552.1| flagellar basal-body rod protein FlgF [Pseudomonas entomophila L48] Length = 246 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 50/245 (20%), Positives = 95/245 (38%), Gaps = 6/245 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A+N++N T GF+ + + + D +F Sbjct: 1 MDKMLYVAMTGASQNALAQKAHANNLANVSTNGFQRDLEQARSM--PVFGDSFPARAFAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 S + G + TG ELD A+ GD + A+++P R G + G L + +G Sbjct: 59 SERPATDFRAGPLVETGRELDVAVSGDGFMAVQAPDGSEAYVRTGSLNIDALGVLRAGNG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQ--KGKVIATMGLYSVDMSQ-GFVRRENSG 176 + + + I QK E+ + G + +V+A + + + + G Sbjct: 119 MAVMGNGGPIAIPPQQKVEVGDDGTISIRAMGEDPRVMAEVDRIKLVNPDIKNMTKGPDG 178 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + P + V V GFLE SN N++ EM ++ L+++F ++ E+ Sbjct: 179 LIHTKNGQPADADVNVRVVSGFLEGSNVNAVEEMTSVLALSRQFELHVKMMKAAEEGDQA 238 Query: 237 AIRNI 241 R + Sbjct: 239 MARVL 243 >gi|148266214|ref|YP_001232920.1| hypothetical protein Gura_4204 [Geobacter uraniireducens Rf4] gi|146399714|gb|ABQ28347.1| protein of unknown function DUF1078 domain protein [Geobacter uraniireducens Rf4] Length = 294 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 44/286 (15%), Positives = 99/286 (34%), Gaps = 50/286 (17%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + G++ L + ++ + +N+SN +T+GF+ + FS+++ A + Q V K Sbjct: 6 AMFTGVSGLLNNGEAMNVIGNNISNVNTIGFKYGRTLFSDMLSANIGNDSQVGRGVQMQK 65 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRG---------IILTRDGRFKVTDDGSL 114 S+ +T D ++G+++FAL+ P +L+R G F V ++ Sbjct: 66 VENIFGSSSYENTENVTDLGIQGNSFFALKPPTTAAPVAAQNAALLSRAGAFHVDKTLTM 125 Query: 115 VSASGKYPVLDMASVPIQ----------------IPQKDEIFNVGEKGEISQKGKVIATM 158 V+ G + + I I + + G + + Sbjct: 126 VNPDGYQVLDTAGNPIQFSNTGAAPATDFAKIVKIEPNGLITYLAQDGITTNYYNASGGV 185 Query: 159 GLYSVDMSQ---------------GFVRRENSGISPNIPP----------TPLEDLSGVT 193 G+ + + G + S +P + + Sbjct: 186 GVATTPANAATVQRLAVVSAADVTGLEKAGGSLYTPTASSGVSAAAFSLAGNQPNGTSEK 245 Query: 194 VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + LE SN + + +MI + +++ + I ++ E + Sbjct: 246 ILSNSLEQSNVDMASQFVKMIITQRAYSANSKTITTADEMTQEILS 291 >gi|308175374|ref|YP_003922079.1| flagellar basal-body rod protein [Bacillus amyloliquefaciens DSM 7] gi|307608238|emb|CBI44609.1| putative flagellar basal-body rod protein [Bacillus amyloliquefaciens DSM 7] gi|328555348|gb|AEB25840.1| flagellar basal-body rod protein [Bacillus amyloliquefaciens TA208] gi|328913716|gb|AEB65312.1| putative flagellar basal-body rod protein [Bacillus amyloliquefaciens LL3] Length = 265 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 44/267 (16%), Positives = 96/267 (35%), Gaps = 29/267 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKND-----I 52 M +A + ++R +++N++N +T G++ + F E++ + I Sbjct: 1 MLKGLYTATSAMITQQRRTEMLSNNIANANTSGYKEDQGSIRAFPEMLLSRIEGDKKTKI 60 Query: 53 DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA-------------WFALESPRGII 99 + V + GS +T D AL + ++ +++ G+ Sbjct: 61 GSVNTGVYMQELKPLFTQGSLKTTDQPTDIALMENQVPKNAETNENAELFYPVQTAGGVR 120 Query: 100 LTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG 159 ++ F + + + ++ +G + I +E F V E G ++ G+ + Sbjct: 121 YSKSSTFSLNQN-NQLTINGNLVLSTNGQP---ITVDNEKFTVSENGTVTSNGRQAGRID 176 Query: 160 LYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTV----KRGFLEDSNANSMYEMGQMIH 215 + + + R N S + V K+G E SN + +M Sbjct: 177 IRMEEDVRNLKRDGNDLYSTADGSELPSAAANPQVSYSLKQGVSELSNVDVTSTYTEMTE 236 Query: 216 LTQKFNSITTLIDENEKSMLEAIRNIA 242 + F + +I +KSM +A I Sbjct: 237 AYRSFEANQKVIQAYDKSMDKAANEIG 263 >gi|256020229|ref|ZP_05434094.1| flagellar basal body rod protein FlgF [Shigella sp. D9] gi|260853467|ref|YP_003227358.1| putative lateral flagellar component of cell-proximal portion of basal-body rod [Escherichia coli O26:H11 str. 11368] gi|260866414|ref|YP_003232816.1| putative lateral flagellar component of cell-proximal portion of basal-body rod [Escherichia coli O111:H- str. 11128] gi|332281391|ref|ZP_08393804.1| lateral flagellar rod protein [Shigella sp. D9] gi|257752116|dbj|BAI23618.1| predicted lateral flagellar component of cell-proximal portion of basal-body rod [Escherichia coli O26:H11 str. 11368] gi|257762770|dbj|BAI34265.1| predicted lateral flagellar component of cell-proximal portion of basal-body rod [Escherichia coli O111:H- str. 11128] gi|323158102|gb|EFZ44201.1| flagellar basal-body rod protein FlgF [Escherichia coli EPECa14] gi|323178493|gb|EFZ64071.1| flagellar basal-body rod protein FlgF [Escherichia coli 1180] gi|323181548|gb|EFZ66968.1| flagellar basal-body rod protein FlgF [Escherichia coli 1357] gi|332103743|gb|EGJ07089.1| lateral flagellar rod protein [Shigella sp. D9] Length = 245 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 47/237 (19%), Positives = 84/237 (35%), Gaps = 7/237 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M L+ A+N++N +T GFR +K Sbjct: 1 MDRLIYTALSGASQTLYEQQISANNLANVNTNGFRADMAM--ATNDKVKGGGFDTRYMAQ 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119 G ++ G T LD A++G + A + + TR+G + D G ++ G Sbjct: 59 EGASGVNDSTGVAEKTERPLDVAIQGAGYIAVQDKNGNEVYTRNGNIQQDDQG-QLTIDG 117 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176 + D + + + G G V ATM + VD+ + + G Sbjct: 118 NLVLGDNGPIILPPNAIASFGSDGTLSVTPDDGDVTATMDIDRLKLVDIPVANLEKNAEG 177 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 + P + + V GFLE SN +++ EM I + ++F + ++ E Sbjct: 178 MLVTADGVPAQRDENIKVSGGFLEGSNVSAVSEMMSSIAMNRQFEAQIKMMKTAEDI 234 >gi|306813302|ref|ZP_07447495.1| flagellar basal body rod protein FlgF [Escherichia coli NC101] gi|305854065|gb|EFM54504.1| flagellar basal body rod protein FlgF [Escherichia coli NC101] Length = 245 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 47/237 (19%), Positives = 84/237 (35%), Gaps = 7/237 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M L+ A+N++N +T GFR +K Sbjct: 1 MDRLIYTALSGASQTLYEQQISANNLANVNTNGFRADMAM--ATNDKVKGGGFDTRYMAQ 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119 G ++ G T LD A++G + A + + TR+G + D G ++ G Sbjct: 59 EGVSGVNDSTGVAEKTERPLDVAIQGAGYIAVQDKNGNEVYTRNGNIQQDDQG-QLTIDG 117 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176 + D + + + G G V ATM + VD+ + + G Sbjct: 118 NLVLGDNGPIILPPNAIASFGSDGTLSVTPDDGDVTATMDIDRLKLVDIPVANLAKNPEG 177 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 + P + + V GFLE SN +++ EM I + ++F + ++ E Sbjct: 178 MLVTADGVPAQRDENIKVSGGFLEGSNVSAVSEMMSSIAMNRQFEAQIKMMKTAEDI 234 >gi|197120190|ref|YP_002140617.1| flagellar hook protein FlgE [Geobacter bemidjiensis Bem] gi|197089550|gb|ACH40821.1| flagellar hook protein FlgE [Geobacter bemidjiensis Bem] Length = 294 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 38/290 (13%), Positives = 87/290 (30%), Gaps = 50/290 (17%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 ++ G++ L + ++ + +N+SN +TVG++ + FS+++ + Q V Sbjct: 5 SALYTGVSGLLQNGEAMNVIGNNISNVNTVGYKGARTLFSDMLSQNVGNNSQIGKGVQMQ 64 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALES---------PRGIILTRDGRFKVTDDGS 113 GS ++ D A++G+++FAL+ L+R G F + Sbjct: 65 AVQNVFSQGSTQTSENVTDLAIQGNSFFALKPSTAAAPVAAQSSAFLSRAGAFHTDSNLY 124 Query: 114 LVSASGKYPVLDMASVPIQI-------------------------------PQKDEIFNV 142 LV+ G + + + V Sbjct: 125 LVNPDGYQVLDTAGNPIKFLNSGAAPATDFGKVLSIDNTGLITYLATDGITQNYYSTSGV 184 Query: 143 GEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP----------TPLEDLSGV 192 + + + + S + Sbjct: 185 AGVATTPAAAAAAQKVAVVTAPDPTALKKVGGSLYQATTTSGVSAAGFSLAANKANGVSE 244 Query: 193 TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 + LE S + E +MI + +++ + I +++ E + I Sbjct: 245 QILSNTLEQSTVDLANEFVKMITTQRAYSANSKTITTSDQMTQEVLSLIR 294 >gi|209695761|ref|YP_002263691.1| flagellar basal body rod protein FlgF [Aliivibrio salmonicida LFI1238] gi|208009714|emb|CAQ80018.1| flagellar basal-body rod protein FlgF [Aliivibrio salmonicida LFI1238] Length = 241 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 54/233 (23%), Positives = 98/233 (42%), Gaps = 11/233 (4%) Query: 9 LAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSK 68 ++ Q + ++N++N T GFR + + + F + + + Sbjct: 1 MSGAKQNMQAMQLSSNNLANVSTTGFRADLEQARAM--QAYGEGLPSRVFSMTERPGQNF 58 Query: 69 EVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYPVLDMA 127 GS I+TG +LD +EGD W ++ LTR G K+ + G L++ SG + V+ Sbjct: 59 AQGSVITTGRDLDLTIEGDGWISVMDNTGREGLTRAGNLKIDETGLLMNGSG-HLVMGEN 117 Query: 128 SVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRRENSGISPN 180 + PI +P + + G IS + + VD ++ + N Sbjct: 118 NAPITLPLPISKIQIAKDGTISVLEQGAPAEAMAEVDRIKLVKTDNRDLFKDTNGLFRSK 177 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 P + + VTV +G LE SN N++ EM +I L ++F ++ E+ Sbjct: 178 NPNNAFQADASVTVLKGALEGSNVNAVGEMTNLIDLQRQFEMQVKMMSTAEEM 230 >gi|170021359|ref|YP_001726313.1| flagellar basal body rod protein FlgF [Escherichia coli ATCC 8739] gi|169756287|gb|ACA78986.1| flagellar basal-body rod protein FlgF [Escherichia coli ATCC 8739] Length = 245 Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats. Identities = 47/237 (19%), Positives = 84/237 (35%), Gaps = 7/237 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M L+ A+N++N +T GFR +K Sbjct: 1 MDRLIYTALSGASQTLYEQQISANNLANVNTNGFRADMAM--ATNDKVKGGGFDTRYMAQ 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119 G ++ G T LD A++G + A + + TR+G + D G ++ G Sbjct: 59 EGASGVNDSTGVAEKTERPLDVAIQGAGYIAVQDKNGNEVYTRNGNIQQDDQG-QLTIDG 117 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176 + D + + + G G V ATM + VD+ + + G Sbjct: 118 NLVLGDNGPIILPPNAIASFGSDGTLSVTPDDGDVTATMDIDRLKLVDIPVANLAKNPEG 177 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 + P + + V GFLE SN +++ EM I + ++F + ++ E Sbjct: 178 MLVTADGVPAQRDENIKVSGGFLEGSNVSAVSEMMSSIAMNRQFEAQIKMMKTAEDI 234 >gi|331666547|ref|ZP_08367421.1| putative flagella basal body rod protein [Escherichia coli TA271] gi|331065771|gb|EGI37655.1| putative flagella basal body rod protein [Escherichia coli TA271] Length = 245 Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats. Identities = 47/237 (19%), Positives = 84/237 (35%), Gaps = 7/237 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M L+ A+N++N +T GFR +K Sbjct: 1 MDRLIYTALSGASQTLYEQQISANNLANVNTNGFRADMAM--ATNDKVKGGGFDTRYMAQ 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119 G ++ G T LD A++G + A + + TR+G + D G ++ G Sbjct: 59 EGASGVNDSTGVAEKTERPLDVAIQGAGYIAVQDKNGNEVYTRNGNIQQDDQG-QLTIDG 117 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176 + D + + + G G V ATM + VD+ + + G Sbjct: 118 NLVLGDNGPIILPPNAIASFGSDGTLSVTPDDGDVTATMDIDRLKLVDIPVANLAKNAEG 177 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 + P + + V GFLE SN +++ EM I + ++F + ++ E Sbjct: 178 MLVTADGFPAQRDENIKVSGGFLEGSNVSAVSEMMSSIAMNRQFEAQIKMMKTAEDI 234 >gi|293408368|ref|ZP_06652207.1| conserved hypothetical protein [Escherichia coli B354] gi|291471546|gb|EFF14029.1| conserved hypothetical protein [Escherichia coli B354] Length = 245 Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats. Identities = 47/237 (19%), Positives = 84/237 (35%), Gaps = 7/237 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M L+ A+N++N +T GFR +K Sbjct: 1 MDRLIYTALSGASQTLYEQQISANNLANVNTNGFRADMAM--ATNDKVKGGGFDTRYMAQ 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119 G ++ G T LD A++G + A + + TR+G + D G ++ G Sbjct: 59 EGASGVNDSTGVAEKTERPLDVAIQGAGYIAVQDKNGNEVYTRNGNIQQDDQG-QLTIDG 117 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176 + D + + + G G V ATM + VD+ + + G Sbjct: 118 NLVLGDNGPIILPPNAIASFGSDGTLSVTPDDGDVTATMDIDRLKLVDIPVANLAKNGEG 177 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 + P + + V GFLE SN +++ EM I + ++F + ++ E Sbjct: 178 MLITADGVPAQRDENIKVSGGFLEGSNVSAVSEMMSSIAMNRQFEAQIKMMKTAEDI 234 >gi|171321213|ref|ZP_02910183.1| protein of unknown function DUF1078 domain protein [Burkholderia ambifaria MEX-5] gi|171093523|gb|EDT38693.1| protein of unknown function DUF1078 domain protein [Burkholderia ambifaria MEX-5] Length = 258 Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats. Identities = 41/250 (16%), Positives = 83/250 (33%), Gaps = 16/250 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA---------IKND 51 M F IG A + + T A N++N +T F+ V FS ++ + Sbjct: 1 MNNLFYIGATGLAAQQTAVDTTAQNIANLNTPAFKRGAVTFSTLLSSGALPGARQENAAP 60 Query: 52 IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTD 110 + G+ T D A+ + + L++P I+L R GR +V D Sbjct: 61 AGIAGGAGVTASARPVFSPGTLRQTDDTWDLAIRSEGFVELDAPDGNIMLWRGGRLRVGD 120 Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIATMGLYSVDMSQGF 169 DG L +++G ++ + V + + + + Sbjct: 121 DGYLRASNGVPLKAAISVPRDAERLEIAPDGKVLAMIPNQAAPLEVGRIEIAQATDPRAL 180 Query: 170 VRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224 + + + T+ +GF E SN E+ ++ + + + Sbjct: 181 QPLGDGTYRIADEGAAVIRSRPGEDNAGTLAQGFSEASNVALADELAGLMLYQRAYAASA 240 Query: 225 TLIDENEKSM 234 L+ ++ M Sbjct: 241 KLVQAGDELM 250 >gi|312884833|ref|ZP_07744525.1| putative flagellar basal-body rod protein [Vibrio caribbenthicus ATCC BAA-2122] gi|309367485|gb|EFP95045.1| putative flagellar basal-body rod protein [Vibrio caribbenthicus ATCC BAA-2122] Length = 243 Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats. Identities = 51/243 (20%), Positives = 102/243 (41%), Gaps = 6/243 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + + A+N+SN DT GFR + S V +K + V Sbjct: 1 MDSLLFTAASGASRVLKAQHVRANNLSNADTAGFRADMERVSSV--PLKGAGFDGRTMVV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + G + TG LD A+ G+ +FA+++P TR G KV + G V+ +G Sbjct: 59 TNSASTRFDAGDMVKTGRALDAAIMGEGYFAVQTPNGEEAYTRAGNLKVDEFG-AVTVNG 117 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178 + D + + QK +I G G + GL V + +++ G+ Sbjct: 118 FAVIGDGGPLVLPDYQKIQISERGVISLTPPGGGAEVNAGGLKLVKPEPNQLEKQSDGLL 177 Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 ++ P + V V +E SN +++ E+ ++ L++ F ++ +++ ++ Sbjct: 178 HSVTGNPFDADPLVQVAPEHIEGSNVSAIDELVNVMSLSRNFEMQFRMMKTA-ETLAKSG 236 Query: 239 RNI 241 + Sbjct: 237 NKL 239 >gi|307637047|gb|ADN79497.1| flagellar basal-body rod protein [Helicobacter pylori 908] gi|325995639|gb|ADZ51044.1| Flagellar basal-body rod protein [Helicobacter pylori 2018] gi|325997235|gb|ADZ49443.1| Flagellar basal-body rod protein [Helicobacter pylori 2017] Length = 269 Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats. Identities = 52/268 (19%), Positives = 100/268 (37%), Gaps = 26/268 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 MQ + A RL ++N++N +T GF+ + + + +Q Sbjct: 1 MQNGYYAATGAMATQFNRLDLTSNNLANLNTNGFKRDDAITGDFLRLYQEYREQLPLEDQ 60 Query: 61 SG-----------------KEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTR 102 + + Y + +G+F T LDFAL + +FA+++ G+ TR Sbjct: 61 TKASAKYLNRNLNRVPILSEIYTDRSLGAFEGTNNPLDFALTSPNLYFAIQTNEGVAYTR 120 Query: 103 DGRFKVTDDGSLVSASGKYP---VLDMASVPIQIPQKDEIFNVGEKGEISQKGK---VIA 156 DG F V DG LV+ +G I + EI G + + Sbjct: 121 DGHFSVDKDGFLVTLNGFKVLSRSGLNEKGGIMLMPNAEIEVDQNGGITFRDNEAQIQAG 180 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + L S + + + + + +++ LE SN N++ EM +I + Sbjct: 181 ALALVSFSEPKNLKKIGQNLYTYQGEGI-HQVSDSGALRQSMLEKSNVNAVREMSALIEI 239 Query: 217 TQKFNSITTLIDE-NEKSMLEAIRNIAS 243 + + + ++ + EAI +A+ Sbjct: 240 NRFLDMYSKVLKTHQDDMNAEAINKLAT 267 >gi|268680165|ref|YP_003304596.1| fagellar hook-basal body protein [Sulfurospirillum deleyianum DSM 6946] gi|268618196|gb|ACZ12561.1| fagellar hook-basal body protein [Sulfurospirillum deleyianum DSM 6946] Length = 267 Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 60/264 (22%), Positives = 104/264 (39%), Gaps = 21/264 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDID---- 53 MQ + A + RL+ +++N++N +T F+ V F + K ++ Sbjct: 1 MQNGYYDVTGAMVTQFNRLNVISNNLANLNTTAFKRDDVVVGDFKRIFQEYKEEMPLRDN 60 Query: 54 ----------QKISFVASGKEYLSKEVGSFISTGTELDFAL-EGDAWFALESPRGIILTR 102 ++Y+ E G +TG LDFAL DA+F +E+P GI LT+ Sbjct: 61 TKEASKFVNAAMSRVPHIVEQYIKYEQGGIKNTGNALDFALKRDDAFFMVETPNGIRLTQ 120 Query: 103 DGRFKVTDDGSLVSASGKYPVLDMA--SVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 +G F + + G L + G + + +D V + G + I M L Sbjct: 121 NGSFTLNNVGILTTKEGYPVLPSTYFQNKQYIEVPEDGELRVNQSGALFVGDDEIGQMYL 180 Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 D + + S + + +G V +GFLE SN N + EM +I + Sbjct: 181 VKSDDIKSLTKEGESLYAFKSTDELTQLENGDFVAQGFLETSNINPVSEMVGLIETNRLV 240 Query: 221 NSITTLIDEN-EKSMLEAIRNIAS 243 ++ + +AI +AS Sbjct: 241 EMYQKVMKSHMNDLNSDAISKLAS 264 >gi|154687758|ref|YP_001422919.1| FlhP [Bacillus amyloliquefaciens FZB42] gi|154353609|gb|ABS75688.1| FlhP [Bacillus amyloliquefaciens FZB42] Length = 273 Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 55/274 (20%), Positives = 104/274 (37%), Gaps = 33/274 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M S A L+Q++ TV+ N+SN+DT G++ +FSE++ + ID K Sbjct: 1 MLRSMLTASTALHQLQQQMDTVSSNLSNSDTTGYKARDSRFSELIRQQYDHIDDKKENSP 60 Query: 61 SGKEYLS---------------KEVGSFISTGTELDFALEGDA-WFALESPRGIILTRDG 104 + ++ GS T +LD A + E+ + TRDG Sbjct: 61 NMRKTPPGLRLGAGTVMTPQLDSGQGSIKKTDRDLDIAFTSPYQYLQAEADGRRVYTRDG 120 Query: 105 RFKVTDDGS-----LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK-----V 154 + G + +G P+LD PIQI + + G ++ + Sbjct: 121 SLSLKPAGGNDRLLQLMTAGGNPILDENGQPIQIDSSLTQLKISKTGTLTASDQAGTRSQ 180 Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPT------PLEDLSGVTVKRGFLEDSNANSMY 208 +G+ +V+ Q ++ S N + + +++G LE SN + Sbjct: 181 TFNLGIVNVNNPQALHAEGDNLFSVNGAGASAIEELTGANRQAIGMEQGALEGSNVDMSK 240 Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 EM +I + + + I ++ + I ++ Sbjct: 241 EMTGLIVSQRSYQLNSRTITLGDQMLG-LINSVR 273 >gi|328913715|gb|AEB65311.1| putative flagellar hook-basal body protein [Bacillus amyloliquefaciens LL3] Length = 274 Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 55/274 (20%), Positives = 104/274 (37%), Gaps = 33/274 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M S A L+Q++ TV+ N+SN+DT G++ +FSE++ + ID K Sbjct: 2 MLRSMLAASTALNQLQQQMDTVSSNLSNSDTTGYKARDSRFSELIRQQYDQIDDKKENSP 61 Query: 61 SGKEYLS---------------KEVGSFISTGTELDFALEGDA-WFALESPRGIILTRDG 104 + ++ GS T +LD A + E+ + TRDG Sbjct: 62 NMRKTPPGLRLGAGAMMTPQLDSGQGSIKKTDRDLDIAFTSPYQYLQAEAGGRRVYTRDG 121 Query: 105 RFKVTDDGS-----LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV----- 154 + G + +G P+LD PIQI + + G ++ + Sbjct: 122 SLTLKPAGGNDRLLQLMTAGGNPILDENGQPIQIDSSLTKLKISKTGTLTASDQTGTRSQ 181 Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPT------PLEDLSGVTVKRGFLEDSNANSMY 208 +G+ +V+ Q ++ S N + +++G LE+SN + Sbjct: 182 TFNLGIVNVNNPQELHAEGDNLFSVNGTGASAIEELTGAKRQEIGMEQGALENSNVDMSK 241 Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 EM +I + + + I ++ + I ++ Sbjct: 242 EMTDLIVSQRSYQLNSRTITLGDQMLG-LINSVR 274 >gi|291486215|dbj|BAI87290.1| flagellar basal-body rod protein [Bacillus subtilis subsp. natto BEST195] Length = 270 Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 48/272 (17%), Positives = 104/272 (38%), Gaps = 34/272 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVV----------GA 47 M +A +A ++R +++N++N +T G++ + F E++ G Sbjct: 1 MLKGLYTATSAMIAQQRRTEMLSNNIANANTSGYKADQGSMRAFPEMLLSRIESKSPAGT 60 Query: 48 IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA-------------WFALES 94 + +I + V + GS ST +D AL + ++ +++ Sbjct: 61 SRTEIGSVNTGVYMQELKPLFTQGSLKSTDQPIDIALIENQVPMNAETNENAALFYPVQT 120 Query: 95 PRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV 154 GI ++ F + ++ + ++ +G+ + I +E F V E G ++ G+ Sbjct: 121 ADGIRYSKSSTFSLNEN-NQLTINGRPVLSTDRQP---ITVDNENFTVSENGTVTTNGRT 176 Query: 155 IATMGLYSVDMSQGFVRRENSGISPNI----PPTPLEDLSGVTVKRGFLEDSNANSMYEM 210 + + + + R N S P + ++K+G E SN + Sbjct: 177 AGQIDVRMAEDVRNLKRDGNDLYSTADGNDLPSAAGNNQVSYSLKQGVSELSNVDVTSAY 236 Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 +M + F + +I +KSM +A I Sbjct: 237 TEMTEAYRSFEANQKVIQAYDKSMDKAANEIG 268 >gi|170680219|ref|YP_001742374.1| flagellar basal body rod protein FlgF [Escherichia coli SMS-3-5] gi|170517937|gb|ACB16115.1| lateral flagellar rod protein LfgF [Escherichia coli SMS-3-5] Length = 245 Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 47/237 (19%), Positives = 84/237 (35%), Gaps = 7/237 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M L+ A+N++N +T GFR +K Sbjct: 1 MDRLIYTALSGASQTLYEQQISANNLANVNTNGFRADMAM--ATNDKVKGGGFDTRYMAQ 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119 G ++ G T LD A++G + A + + TR+G + D G ++ G Sbjct: 59 EGASGVNDSTGVAEKTERPLDVAIQGAGYIAVQDKNGNEVYTRNGNIQQDDQG-QLTIDG 117 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176 + D + + + G G V ATM + VD+ + + G Sbjct: 118 NLVLGDNGPIILPPNAIASFGSDGTLSVTPDDGDVTATMDIDRLKLVDIPVANLAKNPEG 177 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 + P + + V GFLE SN +++ EM I + ++F + ++ E Sbjct: 178 MLVTSDGIPAQRDENIKVSGGFLEGSNVSAVSEMMSSIAMNRQFEAQIKMMKTAEDI 234 >gi|317008999|gb|ADU79579.1| flagellar basal-body rod protein [Helicobacter pylori India7] Length = 269 Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 53/267 (19%), Positives = 97/267 (36%), Gaps = 26/267 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDID---- 53 MQ + A RL ++N++N +T GF+ F + + + Sbjct: 1 MQNGYYAATGAMATQFNRLDLTSNNLANLNTNGFKRDDAITGDFLRLYQQYREQLPLEDQ 60 Query: 54 ----------QKISFVASGKEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTR 102 + Y + +G+F T LDFAL + +FA+++ G+ TR Sbjct: 61 TKASAKYLNRNLNRVPILSEIYTDRSLGAFEGTHNPLDFALTSPNLYFAIQTNEGVAYTR 120 Query: 103 DGRFKVTDDGSLVSASGKYP---VLDMASVPIQIPQKDEIFNVGEKGEISQKGK---VIA 156 DG F V DG LV+ +G I + EI G + + Sbjct: 121 DGHFSVDKDGFLVTLNGFRVLSRSGLNEKGGIMLMPDAEIEVNQNGGITFRDNEAQIQAG 180 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + L S + + + + + +K+ LE SN N++ EM +I + Sbjct: 181 ALALVSFSEPKNLKKIGQNLYTYQGEGV-HQVSDSGALKQYMLEKSNVNAVREMSALIEI 239 Query: 217 TQKFNSITTLIDE-NEKSMLEAIRNIA 242 + + + ++ + EAI +A Sbjct: 240 NRFLDMYSKVLKTHQDDMNAEAINKLA 266 >gi|308184156|ref|YP_003928289.1| flagellar basal-body rod protein [Helicobacter pylori SJM180] gi|308060076|gb|ADO01972.1| flagellar basal-body rod protein [Helicobacter pylori SJM180] Length = 269 Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 56/268 (20%), Positives = 102/268 (38%), Gaps = 26/268 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDIDQKIS 57 MQ + A RL ++N++N +T GF+ F + + + + Sbjct: 1 MQNGYYAATGAMATQFNRLDLTSNNLANLNTNGFKRDDAITGDFLRLYQQYREQLPLENQ 60 Query: 58 FVASGKE--------------YLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTR 102 AS K Y + +G+F T LDFAL + +FA+++ G+ TR Sbjct: 61 TKASAKYLNRNLNRVPILSEIYTDRSLGTFEGTHNPLDFALTSPNIYFAIQTNEGVAYTR 120 Query: 103 DGRFKVTDDGSLVSASGKYP---VLDMASVPIQIPQKDEIFNVGEKGEISQKGK---VIA 156 DG F V DG LV+ +G I + EI G + + Sbjct: 121 DGHFSVDKDGFLVTLNGFKVLSRSGLNEKGGIMLMPNAEIEVDQNGGITFRDNEAQIQAG 180 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + L S + ++ + + + +K+ LE SN N++ EM +I + Sbjct: 181 ALALVSFSEPKNL-KKIGQNLYTYQGESVHQVSDSGALKQYMLEKSNVNAVREMSALIEI 239 Query: 217 TQKFNSITTLIDE-NEKSMLEAIRNIAS 243 + + + ++ + EAI +A+ Sbjct: 240 NRFLDMYSKVLKTHQDDMNAEAINKLAT 267 >gi|332296517|ref|YP_004438440.1| flagellar hook-basal body protein [Thermodesulfobium narugense DSM 14796] gi|332179620|gb|AEE15309.1| flagellar hook-basal body protein [Thermodesulfobium narugense DSM 14796] Length = 251 Score = 126 bits (315), Expect = 4e-27, Method: Composition-based stats. Identities = 55/254 (21%), Positives = 101/254 (39%), Gaps = 20/254 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE--------VVGAIKND- 51 M + L +L +V +N++N T GF+ I SE V Sbjct: 1 MVRGIEAAAKGMITLSDKLDSVTNNLANISTPGFKRIIQNVSESENYPVNRVFLQSDGGR 60 Query: 52 ---IDQKISFVASGKEYLSKEVGSFISTGTELDFAL--EGDAWFALESPRGIILTRDGRF 106 + + + + G T ++ D A+ +A+F +++P GI TRDG F Sbjct: 61 APFMGYLGNGSEISTQAVDLSAGGLEHTSSKFDVAITLNNNAFFQVQTPNGIRYTRDGNF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 + ++ LV+ G + + I + + G I G+ T+G+ S+D Sbjct: 121 TLNNNDELVTQDGYPVLSSANAP---ITIDGQNVVISSDGSIQVDGQQTDTLGIVSLDNP 177 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 V + ++ + N + + S V +G+LE SN N++ EM MI L + + S Sbjct: 178 SLIVPQGSNLYNYNG---QVVNASNFKVLQGYLESSNVNTVREMVDMIALERAYESGQKA 234 Query: 227 IDENEKSMLEAIRN 240 I + + + Sbjct: 235 IVTEDNETGQMLSQ 248 >gi|331645419|ref|ZP_08346523.1| putative flagella basal body rod protein [Escherichia coli M605] gi|323975929|gb|EGB71023.1| fagellar hook-basal body protein [Escherichia coli TW10509] gi|331045581|gb|EGI17707.1| putative flagella basal body rod protein [Escherichia coli M605] Length = 245 Score = 126 bits (315), Expect = 4e-27, Method: Composition-based stats. Identities = 47/237 (19%), Positives = 84/237 (35%), Gaps = 7/237 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M L+ A+N++N +T GFR +K Sbjct: 1 MDRLIYTALSGASQTLYEQQISANNLANVNTNGFRADMAM--ATNDKVKGGGFDTRYMAQ 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119 G ++ G T LD A++G + A + + TR+G + D G ++ G Sbjct: 59 EGASGVNDSTGVAEKTERPLDVAIQGAGYIAVQDKNGNEVYTRNGNIQQDDQG-QLTIDG 117 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176 + D + + + G G V ATM + VD+ + + G Sbjct: 118 NLVLGDNGPIILPPNAIASFGSDGTLSVTPDDGDVTATMDIDRLKLVDIPVANLAKNPEG 177 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 + P + + V GFLE SN +++ EM I + ++F + ++ E Sbjct: 178 MLVTSDGVPAQRDENIKVSGGFLEGSNVSAVSEMMSSIAMNRQFEAQIKMMKTAEDI 234 >gi|152990358|ref|YP_001356080.1| flagellar basal-body rod protein FlgF [Nitratiruptor sp. SB155-2] gi|151422219|dbj|BAF69723.1| flagellar basal-body rod protein FlgF [Nitratiruptor sp. SB155-2] Length = 238 Score = 126 bits (315), Expect = 4e-27, Method: Composition-based stats. Identities = 57/242 (23%), Positives = 100/242 (41%), Gaps = 11/242 (4%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV-KFSEVVGAIKNDIDQKISFVA 60 + + + ++L TV +N++N +T GF+ + V + S+ + D + F Sbjct: 5 LQATYVLASGASRAMEQLDTVTNNLANVNTTGFKEMVVKEMSQRLDENGGDSNHLFVFPR 64 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + L+ G T LDFALEG +F ++ LTR+G F + ++G LV +G Sbjct: 65 FKESILNFAQGPLKHTQNRLDFALEGKGFFIVQKGDQKFLTRNGHFLINNEGLLVDQNGH 124 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 Y + + NV E G I Q G + + + + D Sbjct: 125 YLLDTADKPVRL--EGKSEINVTEDGSIYQNGAFVTKLQIKNYDN-------VTIIGDTY 175 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 P E V++G+LE SN N + EM +MI ++F+ +I ++ + Sbjct: 176 YEPQGNELTVDAKVRQGYLESSNINPLMEMTEMIMAQRRFDMYGNMIKSMDQLNQKT-NE 234 Query: 241 IA 242 I Sbjct: 235 IG 236 >gi|15611401|ref|NP_223052.1| flagellar basal-body rod protein [Helicobacter pylori J99] gi|4154843|gb|AAD05896.1| FLAGELLAR BASAL-BODY ROD PROTEIN [Helicobacter pylori J99] Length = 269 Score = 126 bits (315), Expect = 4e-27, Method: Composition-based stats. Identities = 52/268 (19%), Positives = 100/268 (37%), Gaps = 26/268 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 MQ + A RL ++N++N +T GF+ + + + +Q Sbjct: 1 MQNGYYAATGAMATQFNRLDLTSNNLANLNTNGFKRDDAITGDFLRLYQEYREQLPLEDQ 60 Query: 61 SG-----------------KEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTR 102 + + Y + +G+F T LDFAL + +FA+++ G+ TR Sbjct: 61 TKASAKYLNRNLNRVPILSEIYTDRSLGAFEGTNNPLDFALTSPNLYFAIQTNEGVAYTR 120 Query: 103 DGRFKVTDDGSLVSASGKYP---VLDMASVPIQIPQKDEIFNVGEKGEISQKGK---VIA 156 DG F V DG LV+ +G I + EI G + + Sbjct: 121 DGHFSVDKDGFLVTLNGFKVLSRSGLNEKGGIMLMPNAEIEVDQNGGITFRDNEAQIQAG 180 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + L S + + + + + +++ LE SN N++ EM +I + Sbjct: 181 ALALVSFSEPKNLKKIGQNLYTYQGEGV-HQVSDSGALRQSMLEKSNVNAVREMSTLIEI 239 Query: 217 TQKFNSITTLIDE-NEKSMLEAIRNIAS 243 + + + ++ + EAI +A+ Sbjct: 240 NRFLDMYSKVLKTHQDDMNAEAINKLAT 267 >gi|300817269|ref|ZP_07097487.1| flagellar basal body rod protein FlgF [Escherichia coli MS 107-1] gi|307313518|ref|ZP_07593139.1| fagellar hook-basal body protein [Escherichia coli W] gi|300530245|gb|EFK51307.1| flagellar basal body rod protein FlgF [Escherichia coli MS 107-1] gi|306906686|gb|EFN37197.1| fagellar hook-basal body protein [Escherichia coli W] gi|315059543|gb|ADT73870.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli W] gi|323379898|gb|ADX52166.1| fagellar hook-basal body protein [Escherichia coli KO11] Length = 245 Score = 126 bits (315), Expect = 4e-27, Method: Composition-based stats. Identities = 47/237 (19%), Positives = 84/237 (35%), Gaps = 7/237 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M L+ A+N++N +T GFR +K Sbjct: 1 MDRLIYTALSGASQTLYEQQISANNLANVNTNGFRADMAM--ATNNKVKGGGFDTRYMAQ 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119 G ++ G T LD A++G + A + + TR+G + D G ++ G Sbjct: 59 EGASGVNDSTGVAEKTERPLDVAIQGAGYIAVQDKNGNEVYTRNGNIQQDDQG-QLTIDG 117 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176 + D + + + G G V ATM + VD+ + + G Sbjct: 118 NLVLGDNGPIILPPNAIASFGSDGTLSVTPDDGDVTATMDIDRLKLVDIPVANLAKNPEG 177 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 + P + + V GFLE SN +++ EM I + ++F + ++ E Sbjct: 178 MLVTADGVPAQRDENIKVSGGFLEGSNVSAVSEMMSSIAMNRQFEAQIKMMKTAEDI 234 >gi|254255088|ref|ZP_04948405.1| Flagellar basal body rod protein [Burkholderia dolosa AUO158] gi|124899733|gb|EAY71576.1| Flagellar basal body rod protein [Burkholderia dolosa AUO158] Length = 241 Score = 126 bits (315), Expect = 4e-27, Method: Composition-based stats. Identities = 46/237 (19%), Positives = 85/237 (35%), Gaps = 4/237 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M+ + ++ L A+N++N T GFR V+ + Sbjct: 1 MEAFIYTAMTGAAYAQRALGVRANNLANAQTAGFRADLVRAESL--TPDGVGYDSRHLAH 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + G TG LD A+ G + +E+ G TR G + DG ++ +G+ Sbjct: 59 LVSTDVDVAPGPMSETGRSLDVAIAGAGYLTVETDDGPAYTRAGHLSIDGDG-ALTVNGR 117 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ-GFVRRENSGISP 179 + D + + + I G + + T+ + + + G+ Sbjct: 118 PVLGDGGPIVLPAHRSATIGGDGTISVVPSGESEVQTVARLLLVNPDPADLVKNPEGLLV 177 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + + VTVK G LE SN +++ EM Q + LT+ F L ++ Sbjct: 178 SRSGAEYDADETVTVKGGHLEGSNISAIEEMMQTLSLTRSFEMQMRLYRAADEMADT 234 >gi|261837791|gb|ACX97557.1| flagellar basal-body rod protein [Helicobacter pylori 51] Length = 269 Score = 126 bits (315), Expect = 4e-27, Method: Composition-based stats. Identities = 51/268 (19%), Positives = 98/268 (36%), Gaps = 26/268 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDID---- 53 MQ + A RL ++N++N +T GF+ F + + + Sbjct: 1 MQNGYYAATGAMATQFNRLDLTSNNLANLNTNGFKRDDAITGDFLRLYQQYREQLPLEDQ 60 Query: 54 ----------QKISFVASGKEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTR 102 + Y + +G+F T LDFAL + +FA+++ GI TR Sbjct: 61 TKASAKYLNRNLNRVPILSEIYTDRSLGAFEETHNPLDFALTSPNLYFAIQTNEGIAYTR 120 Query: 103 DGRFKVTDDGSLVSASGKYP------VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156 DG F V DG LV+ +G + + + + N ++ Sbjct: 121 DGHFSVDKDGFLVTLNGFRVLSRSGLNEKGGIMLMPNAEIEVNQNGEITFRDNEAPIQAG 180 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + L S + + + + + +++ LE SN N++ EM +I + Sbjct: 181 ALALVSFSEPKNLKKIGQNLYTYQGEGV-HQISDSGALRQYMLEKSNVNAVREMSTLIGI 239 Query: 217 TQKFNSITTLIDE-NEKSMLEAIRNIAS 243 + + + ++ + EAI +AS Sbjct: 240 NRFLDMYSKVLKTHQDDMNAEAINKLAS 267 >gi|183598618|ref|ZP_02960111.1| hypothetical protein PROSTU_02018 [Providencia stuartii ATCC 25827] gi|188020797|gb|EDU58837.1| hypothetical protein PROSTU_02018 [Providencia stuartii ATCC 25827] Length = 251 Score = 126 bits (315), Expect = 4e-27, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 87/251 (34%), Gaps = 11/251 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + V++N++N T GF+ V I D +Q + V Sbjct: 1 MDHVIYTAMGGARHALENQAIVSNNIANVSTSGFKAQLAAMRAV--PIHGDSEQTRTLVV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASG 119 + G TG +D AL + A+E + TR+G +++ DG LV Sbjct: 59 ASTPGADMSQGPLNYTGRPMDVALNDKHFLAVELADGSEAYTRNGNIQISPDGELVIGER 118 Query: 120 K-YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV--DMSQGFVRRENSG 176 + +VP + ++ +G V Q +R E+ Sbjct: 119 RLQGDGGPINVPPNAELTIGEDGTVTALLATDPPTMLGQIGRLKVVEAQPQDLIRGEDGL 178 Query: 177 I-----SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 + L +V G +E SN N+ M MI + F ++ + Sbjct: 179 FHLSPQAAAANGNGLAQSERASVTSGVIEGSNVNAAEAMVSMIANARYFEMQMKVVRSAD 238 Query: 232 KSMLEAIRNIA 242 ++ +A + +A Sbjct: 239 ENAQKANQLLA 249 >gi|218703526|ref|YP_002411045.1| flagellar basal body rod protein FlgF [Escherichia coli UMN026] gi|293403356|ref|ZP_06647447.1| conserved hypothetical protein [Escherichia coli FVEC1412] gi|298378967|ref|ZP_06988848.1| flagellar basal-body rod protein FlgF [Escherichia coli FVEC1302] gi|300900358|ref|ZP_07118534.1| flagellar basal body rod protein FlgF [Escherichia coli MS 198-1] gi|300936127|ref|ZP_07151066.1| flagellar basal body rod protein FlgF [Escherichia coli MS 21-1] gi|218430623|emb|CAR11489.1| Lateral flagellar rod protein (FlgF-like) [Escherichia coli UMN026] gi|291429209|gb|EFF02229.1| conserved hypothetical protein [Escherichia coli FVEC1412] gi|298280080|gb|EFI21584.1| flagellar basal-body rod protein FlgF [Escherichia coli FVEC1302] gi|300356126|gb|EFJ71996.1| flagellar basal body rod protein FlgF [Escherichia coli MS 198-1] gi|300458705|gb|EFK22198.1| flagellar basal body rod protein FlgF [Escherichia coli MS 21-1] gi|323171065|gb|EFZ56714.1| flagellar basal-body rod protein FlgF [Escherichia coli LT-68] gi|323191539|gb|EFZ76800.1| flagellar basal-body rod protein FlgF [Escherichia coli RN587/1] Length = 245 Score = 126 bits (315), Expect = 4e-27, Method: Composition-based stats. Identities = 47/237 (19%), Positives = 84/237 (35%), Gaps = 7/237 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M L+ A+N++N +T GFR +K Sbjct: 1 MDRLIYTALSGASQTLYEQQISANNLANVNTNGFRADMAM--ATNDKVKGGGFDTRYMAQ 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119 G ++ G T LD A++G + A + + TR+G + D G ++ G Sbjct: 59 EGASGVNDSTGVAEKTERPLDVAIQGAGYIAVQDKNGNEVYTRNGNIQQDDQG-QLTIDG 117 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176 + D + + + G G V ATM + VD+ + + G Sbjct: 118 NLVLGDNGPIILPPNAIASFGSDGTLSVTPDDGDVTATMDIDRLKLVDIPVANLAKNPEG 177 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 + P + + V GFLE SN +++ EM I + ++F + ++ E Sbjct: 178 MLITADGVPAQRDENIKVSGGFLEGSNVSAVSEMMSSIAMNRQFEAQIKMMKTAEDI 234 >gi|239815248|ref|YP_002944158.1| hypothetical protein Vapar_2263 [Variovorax paradoxus S110] gi|239801825|gb|ACS18892.1| conserved hypothetical protein [Variovorax paradoxus S110] Length = 259 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 52/257 (20%), Positives = 96/257 (37%), Gaps = 16/257 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK--------FSEVV----GAI 48 M I L + RL ++ NM+N T G++ FS+ + + Sbjct: 1 MSDVLAISLNSMQQDMARLERISMNMANATTPGYKREVASSLQVGAGAFSDALREARAST 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 + GS STG LD AL +F + + G+ TR G +++ Sbjct: 61 LAGRAAGSPAAGTLLVQTDARPGSLKSTGQSLDVALTAAGFFEVSTDAGLAYTRQGSWQL 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG---KVIATMGLYSVDM 165 G LV+A G + + + P + G + + + + Sbjct: 121 DARGRLVTAQGHPVMGVGGEIVLSRPNPVIDASGQVFESKPGGGAESTPVGQLKVVRFEN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225 + F R G+ + V +++GF+E+SN +SM EM Q+I + F S+ Sbjct: 181 TDDFQR-MGGGLMRTEQQPAQVAEADVQLRQGFVENSNVSSMQEMAQLIQSMRHFESMQR 239 Query: 226 LIDENEKSMLEAIRNIA 242 + ++ + A+R + Sbjct: 240 VALGYDEMIGGAVRKLG 256 >gi|149194279|ref|ZP_01871376.1| flagellar basal-body rod protein [Caminibacter mediatlanticus TB-2] gi|149135454|gb|EDM23933.1| flagellar basal-body rod protein [Caminibacter mediatlanticus TB-2] Length = 262 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 57/261 (21%), Positives = 117/261 (44%), Gaps = 22/261 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDID---- 53 M F A + RL+ +++N++N +T GF+ + F + ++ + Sbjct: 1 MINGFYDTTGAMVTQFNRLNQISNNLANVNTNGFKQDSLIIGTFERLFKQTRDKLPLENN 60 Query: 54 ----------QKISFVASGKEYLSKEVGSFISTGTELDFALEG-DAWFALESPRGIILTR 102 +EY + +G+ I T LD AL+ +++F L++P G +TR Sbjct: 61 TKEAAKFLNRNLNKVPQIVEEYTNFSLGNMIKTSNPLDIALKNKNSFFVLDTPSGDKITR 120 Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162 DG F + ++G LV+ G LD+ PI++P+ + + I G+ + T+ + S Sbjct: 121 DGAFSLDENGFLVNKKGFKV-LDINDKPIKLPKNTKNITIDNDANIYINGEKLTTLKIVS 179 Query: 163 VDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222 +D + +++ + + +P + + T+ +GF+E SN N + EM +I + Sbjct: 180 IDNLKD-IKKVGNNMWDFVPGSEIISTKNTTI-QGFIEKSNVNVIKEMTDLIETNRLVEQ 237 Query: 223 ITTLIDE-NEKSMLEAIRNIA 242 ++ + +AI +A Sbjct: 238 YQKVMTTFMDDLNKDAIEKLA 258 >gi|308061706|gb|ADO03594.1| flagellar basal-body rod protein [Helicobacter pylori Cuz20] Length = 269 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 50/268 (18%), Positives = 99/268 (36%), Gaps = 26/268 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDID---- 53 MQ + A RL ++N++N +T GF+ F + + + Sbjct: 1 MQNGYYAATGAMATQFNRLDLTSNNLANLNTDGFKRDDAITGDFLRLYQQYREQLPLEDQ 60 Query: 54 ----------QKISFVASGKEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTR 102 + Y + +G+F T LDFAL + +FA+++ G+ TR Sbjct: 61 TKASAKYLNRNLNRVPILSEIYTDRSLGAFEETHNPLDFALTSPNLYFAIQTNEGVAYTR 120 Query: 103 DGRFKVTDDGSLVSASGKYP------VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156 DG F V DG LV+ +G + + + + N ++ Sbjct: 121 DGHFSVDKDGFLVTLNGFRVLSRSGLNEKGGIMLMPNAEIEVNQNGEITFRDNEAPIQAG 180 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + L S + + + + + ++++ LE SN N++ EM +I + Sbjct: 181 ALALVSFSEPKNLKKIGQNLYTYQGEGV-HQISDSGSLRQYMLEKSNVNAVREMSALIGI 239 Query: 217 TQKFNSITTLIDE-NEKSMLEAIRNIAS 243 + + + ++ + EAI +AS Sbjct: 240 NRFLDMYSKVLKTHQDDMNAEAINKLAS 267 >gi|39936960|ref|NP_949236.1| flagellar basal body rod protein FlgF [Rhodopseudomonas palustris CGA009] gi|192292788|ref|YP_001993393.1| flagellar basal body rod protein FlgF [Rhodopseudomonas palustris TIE-1] gi|39650817|emb|CAE29340.1| putative flagellar basal-body rod protein flgF [Rhodopseudomonas palustris CGA009] gi|192286537|gb|ACF02918.1| flagellar basal body rod protein [Rhodopseudomonas palustris TIE-1] Length = 253 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 59/251 (23%), Positives = 121/251 (48%), Gaps = 11/251 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND-----IDQK 55 M+ + +GL+ Q+ LE+++ VA+N++N +T GF+ + F E + ++ D++ Sbjct: 1 MENALLVGLSRQVVLERQMDVVANNLANLNTNGFKAERSVFQEFLNTGAHEDNFARPDRR 60 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115 +SFV Y G+ T LD A++G + +++P+G TRDG + G LV Sbjct: 61 VSFVQDRATYHDLSTGALQETKNPLDVAIDGKGFLVVQTPQGERFTRDGSLTINAQGQLV 120 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI----ATMGLYSVDMSQGFVR 171 + SG + + IQ K+ + + + + +I + + + D Q ++ Sbjct: 121 NGSGFPVLGTGGPIVIQPTDKELSISPDGRVSVVEGTSIIDSLRGKLRVVTFDRPQSLIK 180 Query: 172 RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 + + + + V++G++E SN NS+ EM +MI +T+ + I+ ++ + Sbjct: 181 QGGNLFAATSD--QGTPDTKSMVRQGYVEKSNVNSVLEMTRMIDVTRTYTQISAMLQQES 238 Query: 232 KSMLEAIRNIA 242 + AI +A Sbjct: 239 ELRKTAIEKLA 249 >gi|261839205|gb|ACX98970.1| flagellar basal-body rod protein FlgG [Helicobacter pylori 52] Length = 269 Score = 125 bits (314), Expect = 5e-27, Method: Composition-based stats. Identities = 50/268 (18%), Positives = 98/268 (36%), Gaps = 26/268 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDID---- 53 MQ + A RL ++N++N +T GF+ F + + + Sbjct: 1 MQNGYYAATGAMATQFNRLDLTSNNLANLNTNGFKRDDAITGDFLRLYQQYREQLPLEDQ 60 Query: 54 ----------QKISFVASGKEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTR 102 + Y + +G+F T LDFAL + +FA+++ G+ TR Sbjct: 61 TKASAKYLNRNLNRVPILSEIYTDRSLGAFEETHNPLDFALTSPNLYFAIQTNEGVAYTR 120 Query: 103 DGRFKVTDDGSLVSASGKYP------VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156 DG F V DG LV+ +G + + + + N ++ Sbjct: 121 DGHFSVDKDGFLVTLNGFRVLSRSGLNEKGGIMLMPNAEIEVNQNGEITFRDNEAPIQAG 180 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + L S + + + + + +++ LE SN N++ EM +I + Sbjct: 181 ALALVSFSEPKNLKKIGQNLYTYQGEGV-HQISDSGALRQYMLEKSNVNAVREMSALIGI 239 Query: 217 TQKFNSITTLIDE-NEKSMLEAIRNIAS 243 + + + ++ + EAI +AS Sbjct: 240 NRFLDMYSKVLKTHQDDMNAEAINKLAS 267 >gi|308182526|ref|YP_003926653.1| flagellar basal-body rod protein [Helicobacter pylori PeCan4] gi|308064711|gb|ADO06603.1| flagellar basal-body rod protein [Helicobacter pylori PeCan4] Length = 269 Score = 125 bits (314), Expect = 5e-27, Method: Composition-based stats. Identities = 52/268 (19%), Positives = 98/268 (36%), Gaps = 26/268 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDID---- 53 MQ + A RL ++N++N +T GF+ F + + + Sbjct: 1 MQNGYYAATGAMATQFNRLDLTSNNLANLNTNGFKRDDAITGDFLRLYQQYREQLPLEDQ 60 Query: 54 ----------QKISFVASGKEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTR 102 + Y + +G+F T LDFAL + +FA+++ G+ TR Sbjct: 61 TKASAKYLNRNLNRVPILSEIYTDRSLGAFEETHNPLDFALTSPNLYFAIQTNEGVAYTR 120 Query: 103 DGRFKVTDDGSLVSASGKYP---VLDMASVPIQIPQKDEIFNVGEKGEISQKGK---VIA 156 DG F V DG LV+ +G I + EI G + + Sbjct: 121 DGHFSVDKDGFLVTLNGFRVLSRSGLNEKGGIMLMPDAEIEVDQNGGITFRDNEAQIQAG 180 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + L S + + + + + +++ LE SN N++ EM +I + Sbjct: 181 ALALVSFSEPKNLKKIGQNLYTYQGEGV-HQISDSGALRQYMLEKSNVNAVREMSALIGI 239 Query: 217 TQKFNSITTLIDE-NEKSMLEAIRNIAS 243 + + + ++ + EAI +A+ Sbjct: 240 NRFLDMYSKVLKTHQDDMNAEAINKLAT 267 >gi|188495566|ref|ZP_03002836.1| flagellar basal-body rod protein FlgF [Escherichia coli 53638] gi|188490765|gb|EDU65868.1| flagellar basal-body rod protein FlgF [Escherichia coli 53638] Length = 245 Score = 125 bits (314), Expect = 5e-27, Method: Composition-based stats. Identities = 47/237 (19%), Positives = 84/237 (35%), Gaps = 7/237 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M L+ A+N++N +T GFR +K Sbjct: 1 MDRLIYTALSGASQTLYEQQISANNLANVNTNGFRADMAM--ATNDKVKGSGFDTRYMAQ 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119 G ++ G T LD A++G + A + + TR+G + D G ++ G Sbjct: 59 EGASGVNDSTGVAEKTERPLDVAIQGAGYIAVQDKNGNEVYTRNGNIQQDDQG-QLTIDG 117 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176 + D + + + G G V ATM + VD+ + + G Sbjct: 118 NLVLGDNGPIILPPNAIASFGSDGTLSVTPDDGDVTATMDIDRLKLVDIPVANLAKNPEG 177 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 + P + + V GFLE SN +++ EM I + ++F + ++ E Sbjct: 178 MLVTADGVPAQRDENIKVSGGFLEGSNVSAVSEMMSSIAMNRQFEAQIKMMKTAEDI 234 >gi|254499120|ref|ZP_05111810.1| flagellar basal body rod protein [Legionella drancourtii LLAP12] gi|254351659|gb|EET10504.1| flagellar basal body rod protein [Legionella drancourtii LLAP12] Length = 258 Score = 125 bits (314), Expect = 5e-27, Method: Composition-based stats. Identities = 32/258 (12%), Positives = 83/258 (32%), Gaps = 17/258 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--------- 51 M + I + A E + +A++++N +T ++ K+ F +V+ + Sbjct: 1 MSNALAIAASGLKAEEYHIDRIANDLANLNTANYKATKLTFEDVLYQNIHGEESLFNNQP 60 Query: 52 IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTD 110 + A K G ++ D A+ G ++ + + I TR+ V Sbjct: 61 SAKLGLGTALYKSSKDFTDGPLKASNNWNDVAINGSGFYQVINTDGSIAYTRNSALSVDA 120 Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-EISQKGKVIATMGLYSVDMSQGF 169 D L + G ++ E + +++ T+ L + Sbjct: 121 DHYLATQEGLRLADNIQIPEDFTQLTIHTNGNVEVTLVDEPEPQLLGTIQLAKFINPETL 180 Query: 170 VRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224 + + + + T+ + +E SN + + + Q+ + + Sbjct: 181 NPVGSGTYTLTDESSEPLIDNPGSSGLGTLAQYQVEGSNVDMVSSLMQLTMAQRVYQLNA 240 Query: 225 TLIDENEKSMLEAIRNIA 242 + ++ + + I Sbjct: 241 KAVQIADE-LEKLTNEIR 257 >gi|22126388|ref|NP_669811.1| flagellar basal-body rod protein FlgG [Yersinia pestis KIM 10] gi|45441407|ref|NP_992946.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar Microtus str. 91001] gi|108807175|ref|YP_651091.1| flagellar basal-body rod protein FlgG [Yersinia pestis Antiqua] gi|108812481|ref|YP_648248.1| flagellar basal-body rod protein FlgG [Yersinia pestis Nepal516] gi|145598608|ref|YP_001162684.1| flagellar basal-body rod protein FlgG [Yersinia pestis Pestoides F] gi|149366249|ref|ZP_01888284.1| flagellar basal-body rod protein FlgG [Yersinia pestis CA88-4125] gi|162420398|ref|YP_001606475.1| flagellar basal-body rod protein FlgG [Yersinia pestis Angola] gi|165925935|ref|ZP_02221767.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar Orientalis str. F1991016] gi|165938754|ref|ZP_02227309.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar Orientalis str. IP275] gi|166010911|ref|ZP_02231809.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar Antiqua str. E1979001] gi|166210683|ref|ZP_02236718.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar Antiqua str. B42003004] gi|167401156|ref|ZP_02306659.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167419985|ref|ZP_02311738.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425757|ref|ZP_02317510.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167467493|ref|ZP_02332197.1| flagellar basal-body rod protein FlgG [Yersinia pestis FV-1] gi|218928924|ref|YP_002346799.1| flagellar basal-body rod protein FlgG [Yersinia pestis CO92] gi|229896244|ref|ZP_04511414.1| Flagellar basal-body rod protein flgG [Yersinia pestis Pestoides A] gi|229897179|ref|ZP_04512335.1| Flagellar basal-body rod protein flgG [Yersinia pestis biovar Orientalis str. PEXU2] gi|229897905|ref|ZP_04513056.1| Flagellar basal-body rod protein flgG [Yersinia pestis biovar Orientalis str. India 195] gi|229902863|ref|ZP_04517980.1| Flagellar basal-body rod protein flgG [Yersinia pestis Nepal516] gi|270486643|ref|ZP_06203717.1| flagellar basal-body rod protein FlgG [Yersinia pestis KIM D27] gi|294504028|ref|YP_003568090.1| flagellar basal-body rod protein FlgG [Yersinia pestis Z176003] gi|21959374|gb|AAM86062.1|AE013853_10 cell-distal portion of basal-body rod [Yersinia pestis KIM 10] gi|45436267|gb|AAS61823.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar Microtus str. 91001] gi|108776129|gb|ABG18648.1| flagellar basal-body rod protein FlgG [Yersinia pestis Nepal516] gi|108779088|gb|ABG13146.1| flagellar basal-body rod protein FlgG [Yersinia pestis Antiqua] gi|115347535|emb|CAL20444.1| flagellar basal-body rod protein FlgG [Yersinia pestis CO92] gi|145210304|gb|ABP39711.1| flagellar basal-body rod protein FlgG [Yersinia pestis Pestoides F] gi|149292662|gb|EDM42736.1| flagellar basal-body rod protein FlgG [Yersinia pestis CA88-4125] gi|162353213|gb|ABX87161.1| flagellar basal-body rod protein FlgG [Yersinia pestis Angola] gi|165913368|gb|EDR31990.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar Orientalis str. IP275] gi|165922139|gb|EDR39316.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar Orientalis str. F1991016] gi|165990255|gb|EDR42556.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar Antiqua str. E1979001] gi|166207863|gb|EDR52343.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar Antiqua str. B42003004] gi|166961680|gb|EDR57701.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167049545|gb|EDR60953.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167055156|gb|EDR64953.1| flagellar basal-body rod protein FlgG [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229680310|gb|EEO76409.1| Flagellar basal-body rod protein flgG [Yersinia pestis Nepal516] gi|229688946|gb|EEO81011.1| Flagellar basal-body rod protein flgG [Yersinia pestis biovar Orientalis str. India 195] gi|229693516|gb|EEO83565.1| Flagellar basal-body rod protein flgG [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701167|gb|EEO89196.1| Flagellar basal-body rod protein flgG [Yersinia pestis Pestoides A] gi|262361786|gb|ACY58507.1| flagellar basal-body rod protein FlgG [Yersinia pestis D106004] gi|262366078|gb|ACY62635.1| flagellar basal-body rod protein FlgG [Yersinia pestis D182038] gi|270335147|gb|EFA45924.1| flagellar basal-body rod protein FlgG [Yersinia pestis KIM D27] gi|294354487|gb|ADE64828.1| flagellar basal-body rod protein FlgG [Yersinia pestis Z176003] gi|320015465|gb|ADV99036.1| Flagellar basal-body rod protein flgG [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 232 Score = 125 bits (314), Expect = 5e-27, Method: Composition-based stats. Identities = 37/231 (16%), Positives = 78/231 (33%), Gaps = 20/231 (8%) Query: 29 TDTVGFRTIKVKFSEVVGAIKNDID-------------QKISFVASGKEYLSKEVGSFIS 75 T GF+ + F +++ Q + V G+ Sbjct: 1 MSTNGFKRQRAVFEDLLYQTLRQPGAQSSEQTTLPSGLQIGTGVRPVATERLHSQGNLSQ 60 Query: 76 TGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQI- 133 T D A++G+ +F ++ P G TRDG F+V +G LV+A G + + Sbjct: 61 TNNSKDIAIKGEGFFQVQMPDGTNAYTRDGSFQVDQNGQLVTAGGFQVQPAITIPANALS 120 Query: 134 PQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED----- 188 V + + + + L + + G + + Sbjct: 121 MTVGRDGIVSVTLQGQTATQQVGQLTLTTFINNSGLESVGENLYQETASSGAPNETTPGL 180 Query: 189 LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G + +G++E SN N E+ MI + + + + +++ + + + Sbjct: 181 NGGGLLYQGYVETSNVNVAEELVNMIQTQRAYEINSKAVSTSDQMLQKLAQ 231 >gi|331671805|ref|ZP_08372601.1| putative flagella basal body rod protein [Escherichia coli TA280] gi|59889781|emb|CAH19137.1| Lateral flagellar rod protein (FlgF-like) [Escherichia coli] gi|284920045|emb|CBG33102.1| lateral flagellar rod protein (FlgF-like) [Escherichia coli 042] gi|331070794|gb|EGI42153.1| putative flagella basal body rod protein [Escherichia coli TA280] Length = 245 Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats. Identities = 49/237 (20%), Positives = 84/237 (35%), Gaps = 7/237 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M L+ A+N++N +T GFR +K Sbjct: 1 MDRLIYTALSGASQTLYEQQISANNLANVNTNGFRADMAM--ATNDKVKGGGFDTRYMAQ 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119 G ++ G T LD A++G + A + + TR+G + D G LV G Sbjct: 59 EGASGVNDSTGVAEKTERPLDVAIQGAGYIAVQDKNGNEVYTRNGNIQQDDQGQLV-IDG 117 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176 + D + + + G G V ATM + VD+ + + G Sbjct: 118 NLVLGDNGPIILPPNAIASFGSDGTLSVTPDDGDVTATMDIDRLKLVDIPVANLAKNPEG 177 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 + P + + V GFLE SN +++ EM I + ++F + ++ E Sbjct: 178 MLITADGVPAQRDENIKVSGGFLEGSNVSAVSEMMSSIAMNRQFEAQIKMMKTAEDI 234 >gi|90423018|ref|YP_531388.1| flagellar basal body rod protein FlgF [Rhodopseudomonas palustris BisB18] gi|90105032|gb|ABD87069.1| flagellar basal body rod protein [Rhodopseudomonas palustris BisB18] Length = 254 Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats. Identities = 60/251 (23%), Positives = 119/251 (47%), Gaps = 10/251 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN-----DIDQK 55 M+ + IGL+ Q+ LE+++ VA+N++N +T GF+ K F E + + D++ Sbjct: 1 MENALLIGLSRQMTLERQMDVVANNVANVNTTGFKADKSLFQEYLSPGAHEDNFIGRDRR 60 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115 +S+V + G T LD A++G+A+ A+++P G TRDG ++ G LV Sbjct: 61 VSYVQDRATFHDFSSGPLEQTKNPLDVAIDGNAFLAVQTPAGERFTRDGGLQINAQGQLV 120 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI----ATMGLYSVDMSQGFVR 171 +ASG + + Q K+ + + + + L + +Q ++ Sbjct: 121 TASGYQVLGTNGPIVFQPTDKEITIADDGNVTVLEGSSAVDSLRGKLRLVNFAEAQRLLK 180 Query: 172 RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 ++ S L+ V +G++E SN N++ EM +MI +T+ + I++++ + Sbjct: 181 EGSNLYSAGPGAAAQPALT-ARVHQGYIEKSNVNAVAEMSKMIEVTRAYTQISSMLQQQG 239 Query: 232 KSMLEAIRNIA 242 A+ +A Sbjct: 240 DLRKTALEKLA 250 >gi|315586347|gb|ADU40728.1| flagellar basal-body rod protein [Helicobacter pylori 35A] Length = 269 Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats. Identities = 50/268 (18%), Positives = 99/268 (36%), Gaps = 26/268 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDID---- 53 MQ + A RL ++N++N +T GF+ F + + + Sbjct: 1 MQNGYYAATGAMATQFNRLDLTSNNLANLNTNGFKRDDAITGDFLRLYQQYREQLPLEDQ 60 Query: 54 ----------QKISFVASGKEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTR 102 + Y + +G+F T LDFAL + +FA+++ G+ TR Sbjct: 61 TKASAKYLNRNLNRVPILSEIYTDRSLGAFEKTHNPLDFALTSPNLYFAIQTNEGVAYTR 120 Query: 103 DGRFKVTDDGSLVSASGKYP------VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156 DG F V DG LV+ +G + + + + N ++ Sbjct: 121 DGHFSVDKDGFLVTLNGFRVLSRSGLNEKGGIMLMPNAEIEVNQNGEITFRDNEAPIQAG 180 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + L S + + + + + +++ LE SN N+++EM +I + Sbjct: 181 ALALVSFSEPKNLKKIGQNLYTYQGEGI-HQISDSGALRQYMLEKSNVNAVHEMSALIGI 239 Query: 217 TQKFNSITTLIDE-NEKSMLEAIRNIAS 243 + + + ++ + EAI +AS Sbjct: 240 NRFLDMYSKVLKTHQDDMNAEAINKLAS 267 >gi|322432976|ref|YP_004210225.1| flagellar basal-body rod protein FlgF [Acidobacterium sp. MP5ACTX9] gi|321165203|gb|ADW70907.1| flagellar basal-body rod protein FlgF [Acidobacterium sp. MP5ACTX9] Length = 246 Score = 125 bits (313), Expect = 6e-27, Method: Composition-based stats. Identities = 49/245 (20%), Positives = 104/245 (42%), Gaps = 10/245 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + A +A L T+A+N++N+ T GFR FS V+ + +++ Sbjct: 1 MDSGLYAACTALMARTDALDTIANNLANSSTGGFRARHTTFSSVLAGSGRPLASQLNEAT 60 Query: 61 SGK-----EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115 + +L + GS TG++LD ++G + +++ G TR+G +V+ G L+ Sbjct: 61 NSYGLLGGSHLDMQQGSLARTGSDLDVGIDGPGFLTVKTASGNAYTRNGSLQVSTQGQLI 120 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 +A+G+ + + + I ++ + G IS G + + L + +S Sbjct: 121 TATGEPVLGENGPITI---PRNSSVTISADGTISANGAIAGKLKLVEFSATADPQSMGSS 177 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 +P + S V++G LE SN N + + ++I+ + + + + + Sbjct: 178 YY--TVPDKDVVAASKSEVRQGMLEGSNVNPVASVIELINAQRAAEGMRHAMTMIDTEID 235 Query: 236 EAIRN 240 + Sbjct: 236 KTAAQ 240 >gi|149184208|ref|ZP_01862526.1| Flagellar basal-body rod FlgF [Erythrobacter sp. SD-21] gi|148831528|gb|EDL49961.1| Flagellar basal-body rod FlgF [Erythrobacter sp. SD-21] Length = 246 Score = 125 bits (313), Expect = 6e-27, Method: Composition-based stats. Identities = 45/240 (18%), Positives = 82/240 (34%), Gaps = 6/240 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + L+ A +A NM+N +T+GFR + V I+ ++ + Sbjct: 1 MDRLIHTALSGMRASMDSQRVIASNMANANTLGFRAELLDQRPV--TIEGQPNEARAMQI 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G I TG LD A+ A A+++ TR G V+ G LV+ G Sbjct: 59 ARVRGADMSSGQIIETGRNLDVAVTTQALMAVQAEDGTEAYTRRGDLSVSSTGLLVNGEG 118 Query: 120 KYP---VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + + P+ IP + + + + + G Sbjct: 119 RPVLGETGPITIPPVGIPAISPDGTITIADPTTPDQPPAKIGRIKMASWEGSPISKTLDG 178 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + L ++K G LE SN + + +MI + F T ++ ++ Sbjct: 179 LFRVEGGGILPTDETASLKTGALEQSNVKTTEVLVEMIEAQRLFAMRTKIVSTAKEIDES 238 >gi|217033353|ref|ZP_03438784.1| hypothetical protein HP9810_9g106 [Helicobacter pylori 98-10] gi|216944294|gb|EEC23719.1| hypothetical protein HP9810_9g106 [Helicobacter pylori 98-10] Length = 269 Score = 125 bits (313), Expect = 6e-27, Method: Composition-based stats. Identities = 50/268 (18%), Positives = 97/268 (36%), Gaps = 26/268 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDID---- 53 MQ + A RL ++N++N +T GF+ F + + + Sbjct: 1 MQNGYYAATGAMATQFNRLDLTSNNLANLNTNGFKRDDAITGDFLRLYQQYREQLPLEDQ 60 Query: 54 ----------QKISFVASGKEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTR 102 + Y + +G+F T LDFAL + +FA+++ G+ TR Sbjct: 61 TKASAKYLNRNLNRVPILSEIYTDRSLGAFEETHNPLDFALTSPNLYFAIQTNEGVAYTR 120 Query: 103 DGRFKVTDDGSLVSASGKYP------VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156 DG F V DG LV+ +G + + + N ++ Sbjct: 121 DGHFSVDKDGFLVTLNGFRVLSRSGLNEKGGIMLMPNAGIEVNQNGEITFRDNEAPIQAG 180 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + L S + + + + + +++ LE SN N++ EM +I + Sbjct: 181 ALALVSFSEPKNLKKIGQNLYTYQGEGV-HQVSDSGALRQYMLEKSNVNAVREMSALIGI 239 Query: 217 TQKFNSITTLIDE-NEKSMLEAIRNIAS 243 + + + ++ + EAI +AS Sbjct: 240 NRFLDMYSKVLKTHQDDMNAEAINKLAS 267 >gi|78358199|ref|YP_389648.1| flagellar basal-body rod protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78220604|gb|ABB39953.1| flagellar basal-body rod protein, putative [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 260 Score = 125 bits (313), Expect = 6e-27, Method: Composition-based stats. Identities = 58/259 (22%), Positives = 101/259 (38%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 MQ S L L E RL+ +A+N++N +T G++ + F + + +D + Sbjct: 1 MQDSMYSALFGALTNEHRLNNIANNLANVNTTGYKRDVLAFKDTFLSFAHDEVMEPIPNV 60 Query: 61 SGKEYLS----------------KEVGSFISTGTELDFALEGDAWFALESPRGIILTRDG 104 K+ GS TG LD A+ GD +F + +P G TR+G Sbjct: 61 RSKKMFPEPIHIAKPRIALAKTDFSQGSLKLTGGTLDMAVHGDGFFKVRTPDGEFYTRNG 120 Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 F+ T DG LV+ G + + I V E G I G+ I + + ++D Sbjct: 121 NFRQTSDGQLVTQQGWPVLGAGGDIQI---PPRANLTVAENGTIYADGEEIGQVQVVTLD 177 Query: 165 MSQGFVRRENSGIS-PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223 ++ ++ + V +GFLE +N + EM MI ++F + Sbjct: 178 NLDALEKQGSNLFRLREGAEAQEVPVENPVVLQGFLETANVEVVTEMVNMIEANRQFEAY 237 Query: 224 TTLIDENEKSMLEAIRNIA 242 ++ + A + Sbjct: 238 QKIMQTTDAVDKMATTQVG 256 >gi|317180747|dbj|BAJ58533.1| flagellar basal-body rod protein [Helicobacter pylori F32] Length = 269 Score = 125 bits (313), Expect = 7e-27, Method: Composition-based stats. Identities = 50/268 (18%), Positives = 99/268 (36%), Gaps = 26/268 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDID---- 53 MQ + A RL ++N++N +T GF+ F + + + Sbjct: 1 MQNGYYAATGAMATQFNRLDLTSNNLANLNTNGFKRDDAITGDFLRLYQQYREQLPLEDQ 60 Query: 54 ----------QKISFVASGKEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTR 102 + Y + +G+F T LDFAL + +FA+++ G+ TR Sbjct: 61 TKASAKYLNRNLNRVPILSEIYTDRSLGAFEETHNPLDFALTSPNLYFAIQTNEGVAYTR 120 Query: 103 DGRFKVTDDGSLVSASGKYP------VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156 DG F V DG LV+ +G + + + + N ++ Sbjct: 121 DGHFSVDKDGFLVTLNGFRVLSRSGLNEKGGIMLMPNAEIEVNQNGEITFRDNEAPIQAG 180 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + L S + + + + + +++ LE SN N+++EM +I + Sbjct: 181 ALALVSFSEPKNLKKIGQNLYTYQGEGV-HQISDSGALRQYMLEKSNVNAVHEMSTLIGI 239 Query: 217 TQKFNSITTLIDE-NEKSMLEAIRNIAS 243 + + + ++ + EAI +AS Sbjct: 240 NRFLDMYSKVLKTHQDDMNAEAINKLAS 267 >gi|85715053|ref|ZP_01046038.1| Flagellar basal body rod protein [Nitrobacter sp. Nb-311A] gi|85698250|gb|EAQ36122.1| Flagellar basal body rod protein [Nitrobacter sp. Nb-311A] Length = 255 Score = 124 bits (312), Expect = 7e-27, Method: Composition-based stats. Identities = 57/252 (22%), Positives = 116/252 (46%), Gaps = 11/252 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN-----DIDQK 55 M+ + IGL+ Q+ LE+++ VA+N++N +T G++ + F E + + D++ Sbjct: 1 MENALLIGLSRQMMLERQIDVVANNVANVNTNGYKADRSLFEEYLMPGAHEDNFVGRDRR 60 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115 +SFV + G T LD A++G+A+ +++P G TRDG ++ G LV Sbjct: 61 LSFVQDRATFHDFAGGPTEQTKNPLDVAIDGEAFLVVQTPNGERYTRDGGLQINAQGQLV 120 Query: 116 SASGKYPVLDM-----ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170 +ASG + I + +G + + T+ L S Q + Sbjct: 121 TASGYPVLGSNGPIRFQQTDRDITISADGTVTVIEGLNNSTNSIRGTLRLVSFRQPQKLI 180 Query: 171 RRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + ++ + + + + +GF+E SN +++ EM +M+ +++ + + TL+ + Sbjct: 181 KEGSNLYAAGESNFA-QPDTKSQIHQGFIERSNVSAVTEMSRMVQVSRAYTQMATLLQQQ 239 Query: 231 EKSMLEAIRNIA 242 AI +A Sbjct: 240 SDLQRTAIEKLA 251 >gi|317177169|dbj|BAJ54958.1| flagellar basal-body rod protein [Helicobacter pylori F16] Length = 269 Score = 124 bits (312), Expect = 7e-27, Method: Composition-based stats. Identities = 50/268 (18%), Positives = 98/268 (36%), Gaps = 26/268 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDID---- 53 MQ + A RL ++N++N +T GF+ F + + + Sbjct: 1 MQNGYYAATGAMATQFNRLDLTSNNLANLNTNGFKRDDAITGDFLRLYQQYREQLPLEDQ 60 Query: 54 ----------QKISFVASGKEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTR 102 + Y + +G+F T LDFAL + +FA+++ G+ TR Sbjct: 61 TKASAKYLNRNLNRVPILSEIYTDRSLGAFEETHNPLDFALTSPNLYFAIQTNEGVAYTR 120 Query: 103 DGRFKVTDDGSLVSASGKYP------VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156 DG F V DG LV+ +G + + + + N ++ Sbjct: 121 DGHFSVDKDGFLVTLNGFRVLSRSGLNEKGGIMLMPNAEIEVNQNGEITFRDNEAPIQAG 180 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + L S + ++ + + +++ LE SN N++ EM +I + Sbjct: 181 ALALVSFSEPKNL-KKIGQNLYTYHGEGVHQVSDSSALRQYMLEKSNVNAVREMSALIGI 239 Query: 217 TQKFNSITTLIDE-NEKSMLEAIRNIAS 243 + + + ++ + EAI +AS Sbjct: 240 NRFLDMYSKVLKTHQDDMNAEAINKLAS 267 >gi|322421726|ref|YP_004200949.1| flagellar hook-basal body protein [Geobacter sp. M18] gi|320128113|gb|ADW15673.1| flagellar hook-basal body protein [Geobacter sp. M18] Length = 294 Score = 124 bits (312), Expect = 7e-27, Method: Composition-based stats. Identities = 38/290 (13%), Positives = 88/290 (30%), Gaps = 50/290 (17%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 ++ G+ L + ++ + +N+SN +T+GF+ + FS+++ + Q V Sbjct: 5 SALFTGVTGLLQNGEAMNVIGNNISNVNTIGFKGARTLFSDMLSQNVGNDSQIGKGVQMQ 64 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWF---------ALESPRGIILTRDGRFKVTDDGS 113 GS S+ D A++G+ +F + + L+R G F+V + + Sbjct: 65 VVQNVFSQGSTQSSENVTDLAIQGNTFFALKPSTAASPVATQNSAFLSRAGAFQVDNTLT 124 Query: 114 LVSASGKYPVLDMASVPIQI-------------------------------PQKDEIFNV 142 LV+ G + + + Sbjct: 125 LVNPDGYQVLDTQGNPIKFLNSGAAPTTDFGKIISVDNSGLITYLATDGITQNYYNTSGA 184 Query: 143 GEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP----------TPLEDLSGV 192 + + + + + S + Sbjct: 185 VGVAATVANSATVQRLAVVTASDPTALTKLGGSLYQATTAAGVSGAAFSLAANKPNGVSE 244 Query: 193 TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 + LE SN + E +MI + +++ + I ++ E ++ I Sbjct: 245 KILSNTLEQSNVDMASEFVKMIVTQRAYSANSKTITTTDQMTQEVLQLIR 294 >gi|288870659|ref|ZP_06114878.2| flagellar basal-body rod protein FlgG [Clostridium hathewayi DSM 13479] gi|288866377|gb|EFC98675.1| flagellar basal-body rod protein FlgG [Clostridium hathewayi DSM 13479] Length = 248 Score = 124 bits (312), Expect = 7e-27, Method: Composition-based stats. Identities = 56/249 (22%), Positives = 102/249 (40%), Gaps = 19/249 (7%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK---ISFVASGKEYLSK 68 A + L A+NM+N T G++ ++ F +++ + + V + Sbjct: 1 MNAFQSELDVTANNMANVSTPGYKVLRSSFDDLLYTQMDTKNANQMVGHGVKTNGAETVF 60 Query: 69 EVGSFISTGTELDFALEGDAWFALESPR----GIILTRDGRFKVTD--DGSLVSASGKYP 122 E G F T ELDFA+ G A+FA+ES TRDG F+++ +G+ ++ + Sbjct: 61 EQGIFEKTERELDFAILGKAYFAVESENEDAEEPYYTRDGSFQISATDEGNYLTTRDGHY 120 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEIS--QKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 VL I++ K + G+K + + +GLY+ + G V + S Sbjct: 121 VLSRDGDRIELEYKTVEESNGKKQFTNELDLSGLSEVIGLYTCENPDGLVPVGKNLYSTG 180 Query: 181 IP-------PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 E +G + G LE S+ EM ++ + F + ++ ++ Sbjct: 181 AASGEWIPIEDMDETQAGSRLLTGTLELSSTYVPTEMINLLQAQRAFQLNSRIVSAADQ- 239 Query: 234 MLEAIRNIA 242 M E I N+ Sbjct: 240 MEEMINNLR 248 >gi|332673202|gb|AEE70019.1| flagellar basal-body rod protein [Helicobacter pylori 83] Length = 269 Score = 124 bits (312), Expect = 8e-27, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 98/268 (36%), Gaps = 26/268 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDID---- 53 MQ + A RL ++N++N +T GF+ F + + + Sbjct: 1 MQNGYYAATGAMATQFNRLDLTSNNLANLNTNGFKRDDAITGDFLRLYQQYREQLPLEDQ 60 Query: 54 ----------QKISFVASGKEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTR 102 + Y + +G+F T LDFAL + +FA+++ G+ TR Sbjct: 61 TKASAKYLNRNLNRVPILSEIYTDRSLGAFEETHNPLDFALTSPNLYFAIQTNEGVAYTR 120 Query: 103 DGRFKVTDDGSLVSASGKYP------VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156 DG F V DG LV+ +G + + + + N ++ Sbjct: 121 DGHFSVDKDGFLVTLNGFRVLSRSGLNEKGGIMLMPNAEIEVNQNGEITFRDNEAPIQAG 180 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + L S + + + + + +++ LE SN N++ EM +I + Sbjct: 181 ALALVSFSEPKNLKKIGQNLYTYQGEGV-HQVSDSGALRQYMLEKSNVNAVREMSALIGI 239 Query: 217 TQKFNSITTLIDE-NEKSMLEAIRNIAS 243 + + + ++ + EAI +A+ Sbjct: 240 NRFLDMYSKVLKTHQDDMNAEAINKLAA 267 >gi|34497160|ref|NP_901375.1| flagellar basal-body rod protein FlgF [Chromobacterium violaceum ATCC 12472] gi|34103017|gb|AAQ59380.1| flagellar basal-body rod protein FlgF [Chromobacterium violaceum ATCC 12472] Length = 243 Score = 124 bits (312), Expect = 8e-27, Method: Composition-based stats. Identities = 53/245 (21%), Positives = 87/245 (35%), Gaps = 9/245 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M ++ + + A+N++N +T GFR V + Sbjct: 1 MDKLIYTAMSGAGRMLRAQQIHANNLANAETGGFRADIDT--AVSQQVPGYGYDARLLSQ 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + LS G+ + TG +LD AL+GD +FA+ +P TR G DG+L + Sbjct: 59 NAPTALSDRNGTVVETGRDLDIALQGDGFFAVSAPDGSEAYTRAGSMVAGPDGTL--SVN 116 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176 +PVL ++ + A + V V + G Sbjct: 117 GHPVLGDGGPIRLPEGFLKVSVAADGTISVLNPDDAAMQPVDKLKLVKPDPREVGKRPDG 176 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + PL V V+ G LE SN +++ EM + L + F L + M E Sbjct: 177 LIAARQGGPLPVDDSVRVQSGHLERSNVSAVEEMVSTMTLNRNFEMQMKLFNAASD-MNE 235 Query: 237 AIRNI 241 A + Sbjct: 236 AGNRL 240 >gi|268589981|ref|ZP_06124202.1| flagellar basal-body rod protein FlgF [Providencia rettgeri DSM 1131] gi|291314699|gb|EFE55152.1| flagellar basal-body rod protein FlgF [Providencia rettgeri DSM 1131] Length = 251 Score = 124 bits (312), Expect = 8e-27, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 84/251 (33%), Gaps = 11/251 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + V++N++N T GF+ V I D +Q + V Sbjct: 1 MDHVIYTAMGGARHALENQAIVSNNIANVSTAGFKAQLSAMRAV--PIHGDSEQTRTLVV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASG 119 + G TG + D AL + A+E + TR+G +V+ +G LV Sbjct: 59 ASTPGADMSQGPLNYTGKQTDVALNDKHFLAVELADGTEAYTRNGNIQVSSEGELVIGER 118 Query: 120 K-YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV--DMSQGFVRRENSG 176 + +VP + ++ +G V Q +R E+ Sbjct: 119 RLQGDGGPINVPPNAELTIGADGTVTALLATDPPTMLGQIGRLKVVEAQPQDLIRGEDGL 178 Query: 177 I-----SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 L V G +E SN N+ M MI + F ++ + Sbjct: 179 FHLSPQGQAANGNALPQSERGIVTAGVIEGSNVNAAEAMVSMIANARHFEMQMKVVRSAD 238 Query: 232 KSMLEAIRNIA 242 ++ A + +A Sbjct: 239 ENAQRANQLLA 249 >gi|167770196|ref|ZP_02442249.1| hypothetical protein ANACOL_01539 [Anaerotruncus colihominis DSM 17241] gi|167667518|gb|EDS11648.1| hypothetical protein ANACOL_01539 [Anaerotruncus colihominis DSM 17241] Length = 254 Score = 124 bits (312), Expect = 8e-27, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 93/257 (36%), Gaps = 18/257 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSE-----VVGAIKNDI 52 M F + L E+ L+ + +N+ N T GFR +V F + + I Sbjct: 1 MLRGFYTAASGVLMQERTLNVLTNNLVNARTPGFRASRVVSTTFEDEYLVRLEKGASGAI 60 Query: 53 DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL-----ESPRGIILTRDGRFK 107 + S TG D A+ G+ +F + + LTR+G F Sbjct: 61 GTGAPVRIVSDVPTLFDPSSLEETGRPYDLAINGEGFFNILTTDAQGNERQYLTRNGNFD 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 V ++G LV + I F V G+I + + L +V Sbjct: 121 VDEEGMLVLRGHGQVL----GEKGPIQLDTANFTVDYNGDIYNEKGKLVDKVLVTVPPQD 176 Query: 168 GFVRRENSGISPNIPPTPL-EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 + + +G+ T + V + +G+ E SN + EM ++ + F + ++ Sbjct: 177 AELEVDANGMYTAQDMTANTQVGDNVMIVQGWTERSNIDPNREMALVMEAQRTFQACSSA 236 Query: 227 IDENEKSMLEAIRNIAS 243 + +K ++ IA+ Sbjct: 237 LQILDKINQKSATQIAA 253 >gi|327254555|gb|EGE66171.1| flagellar basal-body rod protein FlgF [Escherichia coli STEC_7v] Length = 245 Score = 124 bits (312), Expect = 9e-27, Method: Composition-based stats. Identities = 47/237 (19%), Positives = 84/237 (35%), Gaps = 7/237 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M L+ A+N++N +T GFR +K Sbjct: 1 MDRLIYTALSGASQTLYEQQISANNLANVNTNGFRADMAM--ATNDKVKGGGFDTRYMAQ 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119 G ++ G T LD A++G + A + + TR+G + D G ++ G Sbjct: 59 EGASGVNDSTGVAEKTERPLDVAIQGAGYIAVQDKNGNEVYTRNGNIQQNDQG-QLTIDG 117 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176 + D + + + G G V ATM + VD+ + + G Sbjct: 118 NLVLGDNGPIILPPNAIASFGSDGTLSVTPDDGDVTATMDIDRLKLVDIPVANLAKNPEG 177 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 + P + + V GFLE SN +++ EM I + ++F + ++ E Sbjct: 178 MLVTSDGIPAQRDENIKVSGGFLEGSNVSAVSEMMSSIAMNRQFEAQIKMMKTAEDI 234 >gi|225569956|ref|ZP_03778981.1| hypothetical protein CLOHYLEM_06051 [Clostridium hylemonae DSM 15053] gi|225161426|gb|EEG74045.1| hypothetical protein CLOHYLEM_06051 [Clostridium hylemonae DSM 15053] Length = 250 Score = 124 bits (311), Expect = 9e-27, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 94/254 (37%), Gaps = 18/254 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIK---VKF-SEVVGAIKN------ 50 M F + L +R++ +++NMSN T G++ + F E++ N Sbjct: 1 MFQGFYNLTSGVLTQTRRMNVISNNMSNVSTPGYKRDQFVCKTFKEEMIYRSGNKDKSSP 60 Query: 51 -DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109 + VA+ + Y G + ST + LDFA+ +F ++S G + TR+G F + Sbjct: 61 AQLGTMNRIVAADRNYTDFAAGGYESTESPLDFAIGTSGFFRIQSGNGTVYTRNGSFSLD 120 Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM-SQG 168 ++G L A + + PI + + + + + + Sbjct: 121 NNGYL--ALQGVGRVLGQNGPIYLGTDKIRADRLGNLYSEDGNNFLGRLSVVDFQNYDEE 178 Query: 169 FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228 + + T + V LE SN + EM QM+ + S ++ Sbjct: 179 LTKTTGDVYTSAGQGTAVNAD----VVHKALESSNVEPVNEMTQMMAGERALQSSAQVLK 234 Query: 229 ENEKSMLEAIRNIA 242 ++ + + + + Sbjct: 235 MYDQIIGKVVTQLG 248 >gi|296331270|ref|ZP_06873742.1| flagellar basal-body rod protein [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305676257|ref|YP_003867929.1| putative flagellar basal-body rod protein [Bacillus subtilis subsp. spizizenii str. W23] gi|296151385|gb|EFG92262.1| flagellar basal-body rod protein [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305414501|gb|ADM39620.1| putative flagellar basal-body rod protein [Bacillus subtilis subsp. spizizenii str. W23] Length = 270 Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats. Identities = 47/272 (17%), Positives = 102/272 (37%), Gaps = 34/272 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVV----------GA 47 M +A +A ++R +++N++N +T G++ + F E++ G Sbjct: 1 MLKGLYTATSAMIAQQRRTEMLSNNIANANTSGYKADQGSMRAFPEMLLSRIESKSPAGT 60 Query: 48 IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA-------------WFALES 94 + +I + V + GS ST D L + ++ +++ Sbjct: 61 SRTEIGSVNTGVYMQELKPLFTQGSLKSTDQPTDITLVENQVPVNTETNENAALFYPVQT 120 Query: 95 PRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV 154 GI ++ F + ++ + ++ +G+ + I +E F V E G ++ G+ Sbjct: 121 ADGIRYSKSSTFSLNEN-NQLTINGRPILSTDGQP---ITVDNENFTVSENGTVTMNGRT 176 Query: 155 IATMGLYSVDMSQGFVRRENSGISPNI----PPTPLEDLSGVTVKRGFLEDSNANSMYEM 210 + + + + R N S P + ++K+G E SN + Sbjct: 177 AGQIDVRMAEDVRNLKRDGNDLYSTADGNDLPSAAGNNQVSYSLKQGVSELSNVDVTSAY 236 Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 +M + F + +I +KSM +A I Sbjct: 237 TEMTEAYRSFEANQKVIQAYDKSMDKAANEIG 268 >gi|242238970|ref|YP_002987151.1| flagellar basal body rod protein [Dickeya dadantii Ech703] gi|242131027|gb|ACS85329.1| flagellar basal body rod protein [Dickeya dadantii Ech703] Length = 251 Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats. Identities = 48/247 (19%), Positives = 80/247 (32%), Gaps = 13/247 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + S + +N++N T GFR V + + Sbjct: 1 MDHAIYTAMGAASQTLDQQSVITNNLANASTPGFRAQLSAMRAV--PVDGPTLPTRTLSI 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G T LD A++ D W A++ P TR+G ++ G ++ G Sbjct: 59 ASTPGADMSQGPLDYTSRPLDVAVQNDGWLAVQLPNGEEAYTRNGSIQIDPTG-QLTIQG 117 Query: 120 KYPVLDMAS---VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 V D V G+ V L V + R + G Sbjct: 118 FPVVGDAGPLVVPTQASITISANGTVASLGDGDSPNTVAQVGALKLVKGDSTQLVRGDDG 177 Query: 177 ISPNIP------PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + P L V V G LE SN N++ + MI ++F +I Sbjct: 178 LFHVSPAASQQVGNALPADPTVRVMPGVLEGSNVNTVESLVDMIGSARRFEMQMKVIASV 237 Query: 231 EKSMLEA 237 +++ A Sbjct: 238 DQNAESA 244 >gi|229917022|ref|YP_002885668.1| hypothetical protein EAT1b_1296 [Exiguobacterium sp. AT1b] gi|229468451|gb|ACQ70223.1| protein of unknown function DUF1078 domain protein [Exiguobacterium sp. AT1b] Length = 260 Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats. Identities = 43/253 (16%), Positives = 92/253 (36%), Gaps = 19/253 (7%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 S + + L+++L N++N DTVGF+ + F+ ++ N+ + V Sbjct: 1 MQSIYNSVNSLSQLQRQLDVTGHNIANVDTVGFKRQQGHFASLLSQAYNNQPRPEFEVGR 60 Query: 62 GKE--------------YLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTRDGRF 106 +G +T LD L+ +F +++P G+ +TR G Sbjct: 61 DTPNGIRIGVGGHVADITQQFNIGQVRTTDRGLDVFLKASRQFFVVDTPNGVGVTRSGNM 120 Query: 107 KVT--DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 +++ D+ +LV +G + D + + ++ V G + Sbjct: 121 QLSVGDETTLVDVNGNPLLGDDGNPITMPNDATNQRIRQDGVVVASVNGVEQEFGRLDIV 180 Query: 165 M--SQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222 + +R + T ++ G + G LE SN + EM M + + Sbjct: 181 EVRNTSELRPLGDNVFAADLETEVDRPLGNLLIEGTLESSNVDLTKEMTDMTITQRAYQM 240 Query: 223 ITTLIDENEKSML 235 + + +++ M Sbjct: 241 NSRAMSMSDQMMG 253 >gi|118474276|ref|YP_891712.1| flagellar basal-body rod protein [Campylobacter fetus subsp. fetus 82-40] gi|118413502|gb|ABK81922.1| flagellar basal-body rod protein [Campylobacter fetus subsp. fetus 82-40] Length = 270 Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats. Identities = 39/267 (14%), Positives = 96/267 (35%), Gaps = 24/267 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDIDQKIS 57 MQ + A + RL + +N++N +T+G++ V F + ++ + + Sbjct: 1 MQNGYYQATGAMVTQFNRLDVITNNLANVNTIGYKRDDVVIADFERIFKETRDILPLENH 60 Query: 58 FVASGKEYLSKEVGSFISTGTELDFALEG---------------DAWFALESPRGIILTR 102 + K DF + G D + +++P G+ LT+ Sbjct: 61 TRDAAKFLNRTIDRVPQINEIYTDFNVGGLKMTNNPLDVAIGKSDLFLLVDTPNGVRLTK 120 Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQ-----IPQKDEIFNVGEKGEISQKGKVIAT 157 +G + ++G +V+ G + + + +D + + G I + + Sbjct: 121 NGALNLDNEGYIVTKEGYRVLPNNYENQPEEVRGIQIPQDAPVTIDKDGNIYSNNENVGR 180 Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217 + + + ++ + + +V +G+ + SN N + EM ++ Sbjct: 181 FFIAQPREIRNLQKEGDNLFVLPNLNELNDVENSGSVAQGYSQISNVNPVIEMVNLVETN 240 Query: 218 QKFNSITTLIDEN-EKSMLEAIRNIAS 243 + + ++ + EAI +AS Sbjct: 241 RLVDMYQRVMSTHMNDINQEAITKLAS 267 >gi|103488388|ref|YP_617949.1| flagellar basal-body rod FlgF [Sphingopyxis alaskensis RB2256] gi|98978465|gb|ABF54616.1| Flagellar basal-body rod FlgF [Sphingopyxis alaskensis RB2256] Length = 247 Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats. Identities = 44/243 (18%), Positives = 82/243 (33%), Gaps = 6/243 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M L+A R + +A+N++N T GFR + + + + Sbjct: 1 MDRLIYTSLSAMRGSMARQTAIANNLANAQTPGFRADMASAQSLW--LDGSGLDARAMAS 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASG 119 + G+ STG +LD A++GDA ++ TR G +V+ G L + G Sbjct: 59 EEVLGADMKAGTVTSTGRDLDIAMQGDALLVVQAKNGEEAYTRRGDLQVSPSGLLTTGDG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV---DMSQGFVRRENSG 176 V I I G + Q G + + + V + G Sbjct: 119 HPVQGGQGPVTIPPADAISIDQQGRVWIVPQGGDPENPQEVDRLRLATPAGSEVAKGLDG 178 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + L D + +E SN + + +MI ++ +++ +I + Sbjct: 179 LFRVKGGGILPDDPEARLLTRSIEGSNVTATSALVEMIEASRSWDTQLKMIGDVRDMDSA 238 Query: 237 AIR 239 Sbjct: 239 TAN 241 >gi|317181698|dbj|BAJ59482.1| flagellar basal-body rod protein [Helicobacter pylori F57] Length = 269 Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 97/268 (36%), Gaps = 26/268 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDID---- 53 MQ + A RL ++N++N +T GF+ F + + + Sbjct: 1 MQNGYYAATGAMATQFNRLDLTSNNLANLNTNGFKRDDAITGDFLRLYQQYREQLPLEDQ 60 Query: 54 ----------QKISFVASGKEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTR 102 + Y + +G+F T LDFAL + +FA+++ G+ TR Sbjct: 61 TKASAKYLNRNLNRVPILSEIYTDRSLGAFEETHNPLDFALTSPNLYFAIQTNEGVAYTR 120 Query: 103 DGRFKVTDDGSLVSASGKYP------VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156 DG F V DG LV+ +G + + + N ++ Sbjct: 121 DGHFSVDKDGFLVTLNGFRVLSRSGLNEKGGIMLMPNAGIEVNQNGEITFRDNEAPIQAG 180 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + L S + + + + + +++ LE SN N++ EM +I + Sbjct: 181 ALALVSFSEPKNLKKIGQNLYTYQGEGV-HQISDSGALRQYMLEKSNVNAVREMSALIGI 239 Query: 217 TQKFNSITTLIDE-NEKSMLEAIRNIAS 243 + + + ++ + EAI +A+ Sbjct: 240 NRFLDMYSKVLKTHQDDMNAEAINKLAT 267 >gi|222824020|ref|YP_002575594.1| flagellar distal rod protein FlgG [Campylobacter lari RM2100] gi|222539242|gb|ACM64343.1| flagellar distal rod protein FlgG [Campylobacter lari RM2100] Length = 269 Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 56/268 (20%), Positives = 106/268 (39%), Gaps = 26/268 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDID---- 53 MQ + A + RL V +N++N +T G++ V F + ++++ Sbjct: 1 MQNGYYQATGAMVTQFNRLDVVTNNLANVNTSGYKRDNVVIADFKRIFKETQDELPIQNH 60 Query: 54 ----------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL--ESPRGIILT 101 Y + VGS T LD AL + F L + I LT Sbjct: 61 TRDAARFVNTTIDRVPQVNHVYTNFSVGSMKMTHNPLDLALTREDTFYLIKTNNGEIRLT 120 Query: 102 RDGRFKVTDDGSLVSASGKYP-----VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156 +DG F++ ++G LV+ G + + I+I NV + G +S + IA Sbjct: 121 QDGNFQLDEEGYLVNRQGYRVLSSDYFNNPENDGIRIGNSTSFINVDKNGIVSASNQNIA 180 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + + VD + + ++ ++ + + +++GF + SN N + EM +I Sbjct: 181 RLFVAQVDDLRDLQKDGDNMYKVDLNKV-RDLPNSNAIRQGFTQGSNVNPVTEMVGLIEA 239 Query: 217 TQKFNSITTLIDEN-EKSMLEAIRNIAS 243 + ++ + + EAI +AS Sbjct: 240 NRMVEMYQKVMTSHMDDLNQEAINKLAS 267 >gi|225849134|ref|YP_002729298.1| flagellar basal-body rod protein FlgF [Sulfurihydrogenibium azorense Az-Fu1] gi|225644137|gb|ACN99187.1| flagellar basal-body rod protein FlgF [Sulfurihydrogenibium azorense Az-Fu1] Length = 237 Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 56/239 (23%), Positives = 109/239 (45%), Gaps = 12/239 (5%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV-KFSEVVGAIKNDIDQKISFVASGK 63 I + ++L T+ +N++N +T GF+ I + + S+ + + F Sbjct: 8 IYILASGGSRAVEQLDTITNNIANANTSGFKKILMREISQKIPENVGQTGDLLVFPRFRD 67 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPV 123 + G+ I T LD A+EG+ +F +E+ G TR+G F + ++G LV +G Y + Sbjct: 68 TPVINNQGALIKTDNPLDVAIEGEGFFNVETNVGRFYTRNGHFSINNEGFLVDQNGGYIL 127 Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183 + + ++ KGEI Q G+++AT+ + ++ Q +G Sbjct: 128 --DTNRQRIKLDTNGRVDITTKGEIYQNGRLVATLRVVNLQNLQPVGNGYYNGQ------ 179 Query: 184 TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 + T+++GFLE SN N + EM +MI+ ++F+ L ++ + + I Sbjct: 180 --EQATERYTLRQGFLEGSNVNIVKEMVEMINSHRRFDIYMNLAKSLDQ-LEGRLNEIG 235 >gi|301645414|ref|ZP_07245355.1| flagellar basal body rod protein FlgF [Escherichia coli MS 146-1] gi|307136859|ref|ZP_07496215.1| flagellar basal body rod protein FlgF [Escherichia coli H736] gi|331640714|ref|ZP_08341861.1| putative flagella basal body rod protein [Escherichia coli H736] gi|301076298|gb|EFK91104.1| flagellar basal body rod protein FlgF [Escherichia coli MS 146-1] gi|315616826|gb|EFU97443.1| flagellar basal-body rod protein FlgF [Escherichia coli 3431] gi|331040088|gb|EGI12296.1| putative flagella basal body rod protein [Escherichia coli H736] Length = 245 Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 47/237 (19%), Positives = 84/237 (35%), Gaps = 7/237 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M L+ A+N++N +T GFR +K Sbjct: 1 MDRLIYTALSGASQTLYEQQISANNLANVNTNGFRADMAM--ATNDKVKGGGFDTRYMAQ 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119 G ++ G T LD A++G + A + + TR+G + D G ++ G Sbjct: 59 EGASGVNDSTGVAEKTERPLDVAIQGAGYIAVQDKNGNEVYTRNGNIQQDDQG-QLAIDG 117 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSG 176 + D + + + G G V ATM + VD+ + + G Sbjct: 118 NLVLGDNGPIILPPNAIASFGSDGTLSVTPDDGDVTATMDIDRLKLVDIPVANLAKNPEG 177 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 + P + + V GFLE SN +++ EM I + ++F + ++ E Sbjct: 178 MLITADGVPAQRDENIKVSGGFLEGSNVSAVSEMMSSIAMNRQFEAQIKMMKTAEDI 234 >gi|297379576|gb|ADI34463.1| flagellar basal-body rod protein (flgG) [Helicobacter pylori v225d] Length = 269 Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 99/268 (36%), Gaps = 26/268 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDID---- 53 MQ + A RL ++N++N +T GF+ F + + + Sbjct: 1 MQNGYYAATGAMATQFNRLDLTSNNLANLNTNGFKRDDAITGDFLRLYQQYREQLPLEDQ 60 Query: 54 ----------QKISFVASGKEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTR 102 + Y + +G+F T LDFAL + +FA+++ G+ TR Sbjct: 61 TKASAKYLNRNLNRVPILSEIYTDRSLGAFEETHNPLDFALTSPNLYFAIQTNEGVAYTR 120 Query: 103 DGRFKVTDDGSLVSASGKYP------VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156 DG F V DG LV+ +G + + + + N ++ Sbjct: 121 DGHFSVDKDGFLVTLNGFRVLSRSGLNEKGGIMLMPNAEIEVNQNGEITFRDNEAPIQAG 180 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + L S + + + + + + +++ LE SN N++ EM +I + Sbjct: 181 ALALVSFSEPKNLKKIGQNLYTYQGEGV-HQISNSSALRQYMLEKSNVNAVREMSALIGI 239 Query: 217 TQKFNSITTLIDE-NEKSMLEAIRNIAS 243 + + + ++ + EAI +A+ Sbjct: 240 NRFLDMYSKVLKTHQDDMNAEAINKLAA 267 >gi|15607023|ref|NP_214405.1| flagellar hook basal-body protein FlgG [Aquifex aeolicus VF5] gi|2984276|gb|AAC07801.1| flagellar hook basal-body protein FlgG [Aquifex aeolicus VF5] Length = 241 Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 48/240 (20%), Positives = 90/240 (37%), Gaps = 19/240 (7%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 I L E++L +NM+N +T F+ + + F S Sbjct: 8 IYILGGGMLLQERKLDVSTNNMANVNTPAFKKDYLTAVSYYVPNGQKVQNTNPFEPSNNY 67 Query: 65 YLS--------KEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVS 116 G+ + T LD A+EG+ +FA+ P GI+ TR G F++ ++G L + Sbjct: 68 VYPIVNEVIPVLSQGALVKTENPLDLAIEGEGFFAVRGPNGILYTRKGIFRINEEGFLTT 127 Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 G + + + I + + + + G I + +G++++ Q G Sbjct: 128 EEGYQVLDENLNP---IQIQGQNVKITKDGTIFVDENPVGRLGIFNLQNIQKLGEDFFQG 184 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 V +GF E SN N++ EM ++I + LI ++ + Sbjct: 185 NPTPATDY--------RVYQGFYEASNVNAVKEMVKVIEAVSAHEIFSKLIQMTDEVQGK 236 >gi|148554188|ref|YP_001261770.1| flagellar basal-body rod protein FlgF [Sphingomonas wittichii RW1] gi|148499378|gb|ABQ67632.1| flagellar basal-body rod protein FlgF [Sphingomonas wittichii RW1] Length = 247 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 46/238 (19%), Positives = 84/238 (35%), Gaps = 7/238 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M L+A + R + A+N++N +TVGFR + + +K D + + Sbjct: 1 MDKLIYSSLSAMRSAMARQTMTANNLANANTVGFRGEMSSSTALW--LKGDGFDSRATNS 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWF--ALESPRGIILTRDGRFKVTDDGSLVSAS 118 G+ TG +LD AL+G TR G ++ D G L + Sbjct: 59 GEVTSADMSEGTINETGRDLDVALQGKDTLLAVQSREGDEAYTRRGDLQIGDSGLLTTGD 118 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENS 175 G + D + + + I G + Q G + V + V + Sbjct: 119 GMPVLGDGGPITLPPYDRLVIAGDGTISIVPQGGDPTQMQMVDRLKLVSTNGSAVAKGLD 178 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 G+ L V++G +E SN N + MI ++ ++ ++ + Sbjct: 179 GLFRPQSGGTLGADPQAAVRQGAIEGSNVNVSTTLIDMIEASRDWDMQVKMMSSAQDI 236 >gi|253574272|ref|ZP_04851614.1| flagellar hook-basal body protein [Paenibacillus sp. oral taxon 786 str. D14] gi|251846749|gb|EES74755.1| flagellar hook-basal body protein [Paenibacillus sp. oral taxon 786 str. D14] Length = 273 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 45/273 (16%), Positives = 99/273 (36%), Gaps = 32/273 (11%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + + ++QRL +ADN++N++TVG++ + F + + ++N Sbjct: 1 MNNTVISAMVSMSGIQQRLDLLADNIANSNTVGYKRKEANFEDTLTRVQNQTSDLNLPGR 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 + ++ GS TG D A++G+A F++ P I TR G F Sbjct: 61 ATPSGFTLGFGSRMSQVTVNYAQGSIQETGNMTDLAIQGNAMFSVMLPGGDIAYTRGGDF 120 Query: 107 KVTDDG------SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQK--GKVIATM 158 + D LV+ G + + + + + Sbjct: 121 HIQPDPDDAESAFLVNQLGYVVLNSEGDSITFPSDAKLSIDAEGNILATNGEGTTEVGRI 180 Query: 159 GLYSVDMSQGFVRRENSGISPNIPPTPLE---------DLSGVTVKRGFLEDSNANSMYE 209 L + + V+++ + P E ++++G LE SN + Sbjct: 181 ALLTAERPDALVQKDGNLFVLAAGLDPAEAMVDNLSLPQEQRASLRQGALEASNVDLTEA 240 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 M +M+ + + + + + ++M+ N+ Sbjct: 241 MAEMLQVQRAYQLTARAL-TSGETMMGLANNLR 272 >gi|163789628|ref|ZP_02184066.1| hypothetical protein CAT7_09300 [Carnobacterium sp. AT7] gi|159875160|gb|EDP69226.1| hypothetical protein CAT7_09300 [Carnobacterium sp. AT7] Length = 251 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 40/251 (15%), Positives = 92/251 (36%), Gaps = 14/251 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--------- 51 M +I + A++ ++ V+++++N +T G+++ + F+E++ N Sbjct: 1 MSIPLSISKSGMNAIQNQMDVVSNDIANINTTGYKSKNISFNELLLNDMNGEAAYLSADA 60 Query: 52 -IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVT 109 S + G+ +S + A+ G+ +F + G TRDG F V Sbjct: 61 QGSGISIGSKSAVTSTNFTQGALVSDPNDYHLAIAGEGFFGVTGENGERYLTRDGAFHVN 120 Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169 D S+ + +G + Q P+ D + I + + + +Q Sbjct: 121 GDKSITNDNGDTLEIQATIPINQWPEGDVSIAENGEVTIQSENNSMLVGTIPLFYPAQPN 180 Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 + + ++++ +LE SN + M +MI + ++ + Sbjct: 181 AMQPVGENKFSYDG--AFGTGEGSIQQHYLEASNVDLASSMTEMILAQRSYSMNLKVAQG 238 Query: 230 NEKSMLEAIRN 240 ++ M I Sbjct: 239 TDE-MASVINQ 248 >gi|302671950|ref|YP_003831910.1| flagellar basal-body rod protein FlgG2 [Butyrivibrio proteoclasticus B316] gi|302396423|gb|ADL35328.1| flagellar basal-body rod protein FlgG2 [Butyrivibrio proteoclasticus B316] Length = 277 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 52/277 (18%), Positives = 100/277 (36%), Gaps = 37/277 (13%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVG----------A 47 M + ++R+ + +N++N +T G++ + FS+ + Sbjct: 1 MVKGLYTAYTGMINEQRRMDVLTNNLANANTNGYKKEGLTARAFSDQLALKIKDYTDAPN 60 Query: 48 IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES------------- 94 + V G+ Y+ G T DFA+ G +FA+E Sbjct: 61 TARGLGIINPGVKIGESYVDWSEGPMKETKNTFDFAIGGRGFFAVEYTNKAVNIERDTAG 120 Query: 95 PRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV 154 ++ TRDG F + +G + + G Y + D + + G + Q G V Sbjct: 121 QMDVMYTRDGCFTMNVNGEITTQDGDYVLDDS--GSHIQLDPNLPVEIDTLGNVIQDGAV 178 Query: 155 IATMGLYSVDMS---------QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNAN 205 +A +G+Y + + + + P E + V GFLE SN + Sbjct: 179 VAKIGVYDFEATTYPDGRISYDNLLHYGENFFIPAGDDAGAEVVENARVYSGFLEQSNVS 238 Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 + EM MI + +++ +I + ++ A I Sbjct: 239 VVDEMVNMIATQRNYDTNQRMITTIDDTLQIAANQIG 275 >gi|218778847|ref|YP_002430165.1| hypothetical protein Dalk_0994 [Desulfatibacillum alkenivorans AK-01] gi|218760231|gb|ACL02697.1| Putative Flagellar basal-body rod protein FlgG or FlgF [Desulfatibacillum alkenivorans AK-01] Length = 228 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 46/226 (20%), Positives = 92/226 (40%), Gaps = 19/226 (8%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTG 77 R +++N++N T GF+ + A+ + + G TG Sbjct: 18 RFEVISNNLANVSTPGFKRD-------IYALDKNSNPYTE--------TDMSEGPVQHTG 62 Query: 78 TELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKD 137 ELDF+++G+ +F + G+ TR GRF + D +V+A+G + D I Sbjct: 63 NELDFSIQGEGFFEMLGENGLRYTRQGRFLLNADKEIVNAAGDKLLSDRGDP---IVVDG 119 Query: 138 EIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI-SPNIPPTPLEDLSGVTVKR 196 ++ G + GK + T+ + + + + + + S LE G V + Sbjct: 120 GDLSLAPDGTLMVDGKELETIAVVNFENPKMLSKEGATYYVSEGGAGERLERPEGTIVNQ 179 Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G+LE SN EM +M+ + + + ++ + +A+ + Sbjct: 180 GYLEQSNVIVPQEMVKMMESLRTYETFQKYMNTASEMDTKAVSEVG 225 >gi|217031579|ref|ZP_03437084.1| hypothetical protein HPB128_21g137 [Helicobacter pylori B128] gi|298736702|ref|YP_003729232.1| flagellar basal-body rod protein FlgG [Helicobacter pylori B8] gi|216946779|gb|EEC25375.1| hypothetical protein HPB128_21g137 [Helicobacter pylori B128] gi|298355896|emb|CBI66768.1| flagellar basal-body rod protein FlgG [Helicobacter pylori B8] Length = 269 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 52/268 (19%), Positives = 98/268 (36%), Gaps = 26/268 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDID---- 53 MQ + A RL ++N++N +T GF+ F + + + Sbjct: 1 MQNGYYATTGAMATQFNRLDLTSNNLANLNTNGFKRDDAITGDFLRLYQQYREQLPLEDQ 60 Query: 54 ----------QKISFVASGKEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTR 102 + Y + +G+F T LDFAL + +FA+++ G+ TR Sbjct: 61 TKASAKYLNRNLNRVPVLSEIYTDRSLGAFEGTHNPLDFALTSPNLYFAIQTNEGVAYTR 120 Query: 103 DGRFKVTDDGSLVSASGKYP---VLDMASVPIQIPQKDEIFNVGEKGEISQKGK---VIA 156 DG F V DG LV+ +G I + EI G + + Sbjct: 121 DGHFSVDKDGFLVTLNGFRVLSRSGLNEKGGIMLMPNAEIEVNQNGGITFRDNEAQIQAG 180 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + L S + + + + + +++ LE SN N++ EM +I + Sbjct: 181 ALALVSFSEPKNLKKIGQNLYTYQGEGV-HQVSDSGALRQYMLEKSNVNAVREMSALIEI 239 Query: 217 TQKFNSITTLIDE-NEKSMLEAIRNIAS 243 + + + ++ + EAI +A+ Sbjct: 240 NRFLDMYSKVLKTHQDDMNAEAINKLAT 267 >gi|261341493|ref|ZP_05969351.1| flagellar basal-body rod protein FlgF [Enterobacter cancerogenus ATCC 35316] gi|288316289|gb|EFC55227.1| flagellar basal-body rod protein FlgF [Enterobacter cancerogenus ATCC 35316] Length = 243 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 48/245 (19%), Positives = 91/245 (37%), Gaps = 10/245 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M ++ + A+N++N +T GFR + I+ + V Sbjct: 1 MDHLIYTAVSGASRSLAQQQIHANNLANVNTQGFRHDLDN--ALSQQIQGEGYASRFLVQ 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + + G+ TG +LD A++G AL S + TR+G+ +V +G ++ G Sbjct: 59 QQQGGVDLTPGATRDTGRDLDVAIKGSGLIALVSGNREVYTRNGQIQVGPEGD-LTIDGL 117 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD----MSQGFVRRENSG 176 D + + I + G + G V A M + + + + Sbjct: 118 PVAGDNGPIVLPPFSSINIADDGVISIVPDDGNVAAPMDVDRIKLVDIPASQLSKDAAGF 177 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + N P V + G LE SN +++ EM I L ++F + ++ E + Sbjct: 178 MITNANVNPRT--EEVELVSGHLESSNVSAISEMVASIALNRQFEAQIKMMKAAED-LAT 234 Query: 237 AIRNI 241 A + Sbjct: 235 AGNRL 239 >gi|227356000|ref|ZP_03840392.1| flagellar basal-body rod protein [Proteus mirabilis ATCC 29906] gi|227163988|gb|EEI48890.1| flagellar basal-body rod protein [Proteus mirabilis ATCC 29906] Length = 251 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 80/252 (31%), Gaps = 16/252 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + VA+N++N T GF+ V I + + Sbjct: 1 MDHVIYTAMGGARHSMENQAVVANNLANASTPGFKAQLSAMRAV--PINGETLPTRTLTV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLV---- 115 + G+ TG +D AL + + A++ G TR+G + DG L+ Sbjct: 59 ESTPGSDQRQGTMNYTGRPMDVALSDNGYLAVQLEDGTQAYTRNGNIERNADGMLMVQGR 118 Query: 116 ------SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169 A P +++ I + + + K++ V G Sbjct: 119 LLMGDNGAIEVPPQAEISIANNGIVTAHVPTDPPKMLGQIGRLKMVKPEQNDLVRGDDGL 178 Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 G + P V V G LE SN N M MI ++F +I Sbjct: 179 FHLSPQGTARVGETLPA--DDNVKVLAGVLEGSNVNPAEAMVDMIANARRFEMQMKVIHS 236 Query: 230 NEKSMLEAIRNI 241 + + A + Sbjct: 237 ADDNAQRA-NQL 247 >gi|197285509|ref|YP_002151381.1| flagellar basal-body rod protein [Proteus mirabilis HI4320] gi|194682996|emb|CAR43444.1| flagellar basal-body rod protein [Proteus mirabilis HI4320] Length = 251 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 81/252 (32%), Gaps = 16/252 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + VA+N++N T GF+ V I + + Sbjct: 1 MDHVIYTAMGGARHSMENQAVVANNLANASTPGFKAQLSAMRAV--PINGETLPTRTLTV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLV---- 115 + + G+ TG +D AL + + A++ G TR+G + DG L+ Sbjct: 59 ASTPGSDQRQGTMNYTGRPMDVALSDNGYLAVQLEDGTQAYTRNGNIERNADGMLMVQGR 118 Query: 116 ------SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169 A P +++ I + + + K++ V G Sbjct: 119 LLMGDNGAIEVPPQAEISIANNGIVTAHVPTDPPKMLGQIGRLKMVKPEQNDLVRGDDGL 178 Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 G + P V V G LE SN N M MI ++F +I Sbjct: 179 FHLSPQGTARVGETLPA--DDNVKVLAGVLEGSNVNPAEAMVDMIANARRFEMQMKVIHS 236 Query: 230 NEKSMLEAIRNI 241 + + A + Sbjct: 237 ADDNAQRA-NQL 247 >gi|91791415|ref|YP_561066.1| protein of unknown function DUF1078-like protein [Shewanella denitrificans OS217] gi|91713417|gb|ABE53343.1| protein of unknown function DUF1078-like protein [Shewanella denitrificans OS217] Length = 253 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 46/253 (18%), Positives = 94/253 (37%), Gaps = 12/253 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ----KI 56 M + I + A +++L +A N++N T G++T ++ F VV +++ Q + Sbjct: 1 MIDALYIAESGLDAKQKQLDAIAHNIANVSTPGYKTSQMSFMTVVQEDRDNSGQIVSSQG 60 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLV 115 V + + L VG TG LD A+ G + +E ++ +R GR G L Sbjct: 61 LGVMAQQSPLDMSVGKMEQTGRPLDVAINGAGFLEVEQGNGKLLYSRGGRLITDAQGYLS 120 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 + +G + P + + + I + L + N+ Sbjct: 121 TENGLRLTSMLQIPPDAEDVRIATDGMLSAKLPGNEVIEIGQVQLVNFVDMSAIKAVGNN 180 Query: 176 GISPNIPPTPLED------LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 + +++G LE SN + EM M+ + + L+ Sbjct: 181 LFEVDQEALNTAYYGSVGESGMGVLQQGMLESSNVSMNQEMMNMMMAQRSYQLNARLVQV 240 Query: 230 NEKSMLEAIRNIA 242 +++ + E + N+ Sbjct: 241 SDQIL-ETLNNLR 252 >gi|323703190|ref|ZP_08114843.1| flagellar basal-body rod protein FlgF [Desulfotomaculum nigrificans DSM 574] gi|323531849|gb|EGB21735.1| flagellar basal-body rod protein FlgF [Desulfotomaculum nigrificans DSM 574] Length = 257 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 48/256 (18%), Positives = 105/256 (41%), Gaps = 16/256 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVG---------AI 48 M I + + + +L+ +A+N++N T G++ V F+ + Sbjct: 1 MLRGLYIAMNSMDVQQAKLNNIANNLANLATPGYKKTNVVVDKFAATLQLAVEANGPKGK 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFK 107 + I + G+ TG+ D AL+G+ +FA+E P G + TRDG F Sbjct: 61 REPIGAGNLGNMVARVSTDFSPGALTETGSPTDLALDGNGFFAVEGPNGEQLYTRDGSFH 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-IATMGLYSVDMS 166 + +G+L+++ G + + + I + + G + + + L Sbjct: 121 LDAEGNLLTSDGYKVLGEGGPITIGDAKHVTVKENGTIVVGQGEEMTEVDKLQLVEFADP 180 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 + E + + P + + V +G+LE +N + + EM +I T+ + S L Sbjct: 181 SRLQKAEGNYFA--DPQGTGQPAATTRVSQGWLEKANVDPVQEMINIIPATRIYESSQRL 238 Query: 227 IDENEKSMLEAIRNIA 242 + +++ + ++I + Sbjct: 239 VQISDELLDKSINQVG 254 >gi|126462483|ref|YP_001043597.1| hypothetical protein Rsph17029_1715 [Rhodobacter sphaeroides ATCC 17029] gi|126104147|gb|ABN76825.1| protein of unknown function DUF1078 domain protein [Rhodobacter sphaeroides ATCC 17029] Length = 251 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 86/249 (34%), Gaps = 8/249 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTV-ADNMSNTDTVGFRTIKVKFSEV-VGAIKNDIDQKISF 58 M + L + A + + A N++N GFR + + + Sbjct: 1 MDRLIHTALNSL-ANLRDTRVIQAQNLANQTVPGFRRDLTNEGDARFLKALDAASARAFQ 59 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSA 117 G S G TG +D A+ + WF ++ G L+R G ++T DG L++ Sbjct: 60 TERGPHLFSSAPGLLNQTGEPMDVAIAEEGWFFVQPEGGEPALSRRGDLRLTADGRLLNG 119 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM---GLYSVDMSQGF-VRRE 173 +G+ + P + I + + + L + + G +R++ Sbjct: 120 AGEAMLDPAMQPIELPPVRALIVDETGRILYEPQDGPPGQQVEGPLIATTIPDGVTLRKD 179 Query: 174 NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 G V +G LE SN N+M E+ I L + F +I ++ Sbjct: 180 PDGRIRAGGEPLPPPDQRARVLQGVLEGSNVNTMEELVSSIELQRTFELNLRMISSAKEL 239 Query: 234 MLEAIRNIA 242 R + Sbjct: 240 DESGARLLR 248 >gi|70729005|ref|YP_258739.1| flagellar basal body rod protein FlgF [Pseudomonas fluorescens Pf-5] gi|68343304|gb|AAY90910.1| flagellar basal-body rod protein FlgF [Pseudomonas fluorescens Pf-5] Length = 246 Score = 123 bits (307), Expect = 3e-26, Method: Composition-based stats. Identities = 49/245 (20%), Positives = 95/245 (38%), Gaps = 6/245 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A+N++N T GF+ + + + D +F Sbjct: 1 MDKYLYVAMTGASQNALAQKAHANNLANISTNGFQRDLEQARAM--PVFGDSFPARAFAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 S + GS + TG +LD A+ G+ W A++SP R G V G L + +G Sbjct: 59 SERPATDFSAGSMVETGRDLDVAVSGNGWIAVQSPDGSESYVRTGSLNVDALGVLRAGNG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQK--GKVIATMGLYSVDMSQ-GFVRRENSG 176 + + + + QK E+ G + +V+A + + + + G Sbjct: 119 MPVMGNGGPIAVPPEQKIEVGQDGTISIRAMGEGPRVMAEVDRIKLVNPDIKNLTKGLDG 178 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 P + V + GFLE SN N++ EM ++ L+++F +++ ++ Sbjct: 179 SIKTKDGQPAPADANVQLVSGFLESSNVNAVEEMTAVLALSRQFELHVKMMNSAKEDDQA 238 Query: 237 AIRNI 241 R + Sbjct: 239 MARVL 243 >gi|78777302|ref|YP_393617.1| flagellar basal body rod protein [Sulfurimonas denitrificans DSM 1251] gi|78497842|gb|ABB44382.1| Flagellar basal body rod protein [Sulfurimonas denitrificans DSM 1251] Length = 276 Score = 123 bits (307), Expect = 3e-26, Method: Composition-based stats. Identities = 57/273 (20%), Positives = 104/273 (38%), Gaps = 31/273 (11%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 MQ+ + A + RL T+A+N++N +TVGF+ + + + K D+ + Sbjct: 1 MQSGYYSSAAGMVTQFNRLDTIANNLANVNTVGFKEDNLIVGDFMRLYKEARDELPNANH 60 Query: 61 SGK-----------------EYLSKEVGSFISTGTELDFALEGDA-WFALESPRGIILTR 102 + + Y +G + LD AL + +F +++P GI LTR Sbjct: 61 TKEAAQFLNRAMNKAPQVVDAYTDFSLGVMQKSNNSLDMALSKEGLFFLVKTPEGIRLTR 120 Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDE------IFNVGEKGEISQKGKVIA 156 DG F D+G LV+ G + + Q ++ I G+ + Sbjct: 121 DGTFTKDDEGKLVTKQGYEVLPSDYFISKQPIIFNQGDSAIEIDKNGQILTNIPNSMTLN 180 Query: 157 TMGLYSVDMSQG--FVRRENSGISPNIPPTPLE----DLSGVTVKRGFLEDSNANSMYEM 210 + + F+++E G+ +E V +GF+E SN N++ M Sbjct: 181 QLNRLFIAQPDNIDFLKKEGDGLYRYDGAGGVEGLVSFDGSEAVLQGFIEKSNVNAVKMM 240 Query: 211 GQMIHLTQKFNSITTLIDEN-EKSMLEAIRNIA 242 Q+I + +D +AI +A Sbjct: 241 TQLIETNRLVGMYQKAMDTQMNDMNRDAIEKLA 273 >gi|317406200|gb|EFV86449.1| flagellar basal-body rod protein FlgF [Achromobacter xylosoxidans C54] Length = 253 Score = 123 bits (307), Expect = 3e-26, Method: Composition-based stats. Identities = 51/247 (20%), Positives = 100/247 (40%), Gaps = 11/247 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + + +++NM+N +T GFR + V + ++S VA Sbjct: 1 MDRIIYTAMNGAARITEHQAALSNNMANVNTPGFREQIALYRSVPVNDGVSLPTRVSTVA 60 Query: 61 SGKEYLSKEVGSFISTGTELDFAL-EGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119 S + E+G+ +TG +LD AL + W A+++P+G TR G +V +G L ++ G Sbjct: 61 S-TPRNNFEMGNMQTTGRDLDVALASSNGWIAVQTPQGEAYTRAGSLQVGVNGLLQTSLG 119 Query: 120 KYPVLDMASVPIQIPQ----KDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 + + D + Q + G ++ + + + + + Sbjct: 120 QPVMSDQNGIIDVPDQAALTITSDGTITAIGAGDAPNNILNLGRIKLANPPEAQLVHGDD 179 Query: 176 GISPNI-----PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 G+ P P+ + V G LE SN N M M MI ++F ++ + Sbjct: 180 GVFRLAPVNGQPAPPVPADPSLRVLSGVLEGSNTNPMAAMVGMIENARRFEQQMQVVQQA 239 Query: 231 EKSMLEA 237 +++ A Sbjct: 240 DRNAERA 246 >gi|4378857|gb|AAD19725.1| flagellar basal-body rod protein [Zymomonas mobilis subsp. mobilis ZM4] Length = 249 Score = 123 bits (307), Expect = 3e-26, Method: Composition-based stats. Identities = 44/243 (18%), Positives = 84/243 (34%), Gaps = 10/243 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M L+ A ++ A N+SNT+T GF+ + + + + Sbjct: 1 MDRLLYTSLSGMRATMRQQIATASNLSNTETPGFKKELSTQAAFW---LRGGNSSRAMAS 57 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 G + TG +LD A+ GD+ A+++ TR G +VT+ G LV+ G Sbjct: 58 QGIYSADLQKAEVQQTGRDLDLAMGGDSMIAVQAEDGSEAYTRRGDLQVTNSGVLVNGEG 117 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV------DMSQGFVRRE 173 V + + I K I G I + + + + + + Sbjct: 118 HPLVGERGPITIGAADKITIDKDGTVYVILPGQNPVQPEAIDQIKLFSPSTQPRNRIAKG 177 Query: 174 NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 G+ + L +V+ LE+SN + MI ++ + ++ + Sbjct: 178 LDGLFRVVDGGTLNRDPAASVQADSLENSNVEPTQALVDMIQASRSYEQSVKMVATARQL 237 Query: 234 MLE 236 Sbjct: 238 DES 240 >gi|148546708|ref|YP_001266810.1| flagellar basal body rod protein FlgF [Pseudomonas putida F1] gi|148510766|gb|ABQ77626.1| flagellar basal-body rod protein FlgF [Pseudomonas putida F1] Length = 246 Score = 123 bits (307), Expect = 3e-26, Method: Composition-based stats. Identities = 44/246 (17%), Positives = 94/246 (38%), Gaps = 9/246 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A+N++N T GF+ + + + D +F Sbjct: 1 MDKMLYVAMTGASQNALAQKAHANNLANISTNGFQRDLEQARSM--PVFGDSFPARAFAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + G + TG +LD + G+ + A+++P R G + G L + +G Sbjct: 59 TERPGTDFSEGPMVETGRDLDVTVSGNGFIAVQAPDGSEAYVRTGSLNIDALGVLRTGNG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV---IATMGLYSVDMSQGFVRRENSG 176 + + + I QK E+ + G S + V+ + + G Sbjct: 119 MPVLGNGGPIAIPPEQKVEVGSDGTISIRSMGEDPRVMAEVDRIKLVNPDTKGLTKGQDG 178 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN---EKS 233 + P + V V GFL+ SN N++ EM ++ L+++F +++ +++ Sbjct: 179 LIHTSSGQPADADVNVRVVSGFLQGSNVNAVEEMTSVLALSRQFELHVKMMNAAKEGDEA 238 Query: 234 MLEAIR 239 M ++ Sbjct: 239 MARVLQ 244 >gi|56551506|ref|YP_162345.1| flagellar basal-body rod protein FlgF [Zymomonas mobilis subsp. mobilis ZM4] gi|241761150|ref|ZP_04759239.1| flagellar basal-body rod protein FlgF [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|260752887|ref|YP_003225780.1| flagellar basal-body rod protein FlgF [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|56543080|gb|AAV89234.1| flagellar basal-body rod protein FlgF [Zymomonas mobilis subsp. mobilis ZM4] gi|241374769|gb|EER64230.1| flagellar basal-body rod protein FlgF [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|258552250|gb|ACV75196.1| flagellar basal-body rod protein FlgF [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 249 Score = 123 bits (307), Expect = 3e-26, Method: Composition-based stats. Identities = 44/243 (18%), Positives = 84/243 (34%), Gaps = 10/243 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M L+ A ++ A N+SNT+T GF+ + + + + Sbjct: 1 MDRLLYTSLSGMRATMRQQIATASNLSNTETPGFKKELSTQAAFW---LRGGNSSRAMAS 57 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 G + TG +LD A+ GD+ A+++ TR G +VT+ G LV+ G Sbjct: 58 QGIYSADLQKAEVQQTGRDLDLAMGGDSMIAVQAEDGSEAYTRRGDLQVTNSGVLVNGEG 117 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV------DMSQGFVRRE 173 V + + I K I G I + + + + + + Sbjct: 118 HPLVGERGPITIGAADKITIDKDGTVYVILPGQNPVQPEAIDQIKLVSPSTQPRNRIAKG 177 Query: 174 NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 G+ + L +V+ LE+SN + MI ++ + ++ + Sbjct: 178 LDGLFRVVDGGTLNRDPAASVQADSLENSNVEPTQALVDMIQASRSYEQSVKMVATARQL 237 Query: 234 MLE 236 Sbjct: 238 DES 240 >gi|254712013|ref|ZP_05173824.1| flagellar basal body rod protein FlgG [Brucella ceti M644/93/1] gi|254715082|ref|ZP_05176893.1| flagellar basal body rod protein FlgG [Brucella ceti M13/05/1] gi|261216792|ref|ZP_05931073.1| flagellar basal-body rod protein FlgG [Brucella ceti M13/05/1] gi|261319659|ref|ZP_05958856.1| flagellar basal-body rod protein FlgG [Brucella ceti M644/93/1] gi|260921881|gb|EEX88449.1| flagellar basal-body rod protein FlgG [Brucella ceti M13/05/1] gi|261292349|gb|EEX95845.1| flagellar basal-body rod protein FlgG [Brucella ceti M644/93/1] Length = 241 Score = 123 bits (307), Expect = 3e-26, Method: Composition-based stats. Identities = 43/222 (19%), Positives = 73/222 (32%), Gaps = 21/222 (9%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55 + I A + L +A+N++N +T GF+ + +F++++ + Sbjct: 1 MKALTIAATGMNAQQLNLEVIANNIANINTTGFKRARAEFTDLLYQSERTAGVPNQANQA 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 V + GSF TG D AL G WF ++SP + TR G F Sbjct: 61 IVPEGALVGLGVQTAAVRNLHIQGSFNQTGNPYDVALTGRGWFQIQSPTGETLYTRAGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE-KGEISQKGKVIATMGLYSVDM 165 DG LV+ G + P I K + + + L + Sbjct: 121 NKNADGQLVTLDGNPVEPAITIPPDAIEVTITDTGQVFAKLQDQINQVDLGQLTLANFTN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDS 202 G + ++K+G+LE S Sbjct: 181 EAGLEPLGGNLYRETEASGGPLVGVPGDPGYGSIKQGYLEAS 222 >gi|52082162|ref|YP_080953.1| flagellar basal-body rod protein [Bacillus licheniformis ATCC 14580] gi|52787554|ref|YP_093383.1| FlhO [Bacillus licheniformis ATCC 14580] gi|319648039|ref|ZP_08002256.1| FlhO protein [Bacillus sp. BT1B_CT2] gi|52005373|gb|AAU25315.1| flagellar basal-body rod protein [Bacillus licheniformis ATCC 14580] gi|52350056|gb|AAU42690.1| FlhO [Bacillus licheniformis ATCC 14580] gi|317389674|gb|EFV70484.1| FlhO protein [Bacillus sp. BT1B_CT2] Length = 279 Score = 123 bits (307), Expect = 3e-26, Method: Composition-based stats. Identities = 43/280 (15%), Positives = 95/280 (33%), Gaps = 42/280 (15%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIK---VKFSEVVGA---------- 47 M +A + ++R + +N++N +T G++ + F E++ + Sbjct: 1 MLKGLYTATSAMITQQRRTEMLTNNIANANTPGYKEDQGSIRSFPEMLLSRIESDSFKAG 60 Query: 48 -------IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA------------ 88 + I + V + G ST D A+ Sbjct: 61 SASRSFSTQTPIGSINTGVYMQELKPQFSQGDLQSTNEPTDIAISEAEVPVNGETNDKAA 120 Query: 89 --WFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG 146 + + +R RF + ++ + ++ +G+ + I E F V E G Sbjct: 121 LFYAVRLENGDVRYSRSSRFSLNEN-NQLTINGRLVLSTENRP---ITVGSENFQVAEDG 176 Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISP-NIPPTPLEDLSG---VTVKRGFLEDS 202 +++ G+ + + + ++ R + N P + +VK+G E S Sbjct: 177 TVTENGQNLGRIDVRIALDTRNLAREGDDLYRTENGEALPSAVGNPEVTYSVKQGMTERS 236 Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 N + +M + F + ++ +KSM +A I Sbjct: 237 NVDVTRAYTEMTAAYRSFEANQKVLQAYDKSMEKAANEIG 276 >gi|172058672|ref|YP_001815132.1| hypothetical protein Exig_2667 [Exiguobacterium sibiricum 255-15] gi|171991193|gb|ACB62115.1| protein of unknown function DUF1078 domain protein [Exiguobacterium sibiricum 255-15] Length = 260 Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats. Identities = 49/257 (19%), Positives = 99/257 (38%), Gaps = 26/257 (10%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 S + L+++L T N++N +T G++ +F+E++ N+ Sbjct: 1 MQSLYTSASTMAQLQKQLDTTGHNLANANTNGYKRRDSQFNELLVRNLNNQPAGLTPGSL 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG--IILTRDGR 105 + E G+F +TG +LD AL F TRDG Sbjct: 61 TTPAGLRLGVGGYVANEATRFATGTFQNTGRKLDAALSNPHHFFGVIDADGVTKFTRDGN 120 Query: 106 FKVTDDGS---LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEIS----QKGKVIATM 158 F+++ + L++ V++ A+ PI P + + G I+ + +V+A + Sbjct: 121 FELSPQANGQVLLTDDAGRSVINQANEPITFPDDATSIELNKDGNITGVLNGERRVLARI 180 Query: 159 GLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 G+ + G + G+ + +TV G LE SN + EM + + + Sbjct: 181 GVADIPN-HGELTDVGGGLYTTAGQYQNATGNPLTV--GTLETSNVDMATEMTNLTQIQR 237 Query: 219 KFNSITTLIDENEKSML 235 + + + +++ M Sbjct: 238 AYQFNSKALTTSDQMMG 254 >gi|290474973|ref|YP_003467857.1| flagellar basal body rod cell-proximal protein [Xenorhabdus bovienii SS-2004] gi|289174290|emb|CBJ81080.1| flagellar biosynthesis; cell-proximal portion of basal-body rod [Xenorhabdus bovienii SS-2004] Length = 251 Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats. Identities = 45/251 (17%), Positives = 86/251 (34%), Gaps = 11/251 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + A + + A+N++N T GF+ V I+ + + Sbjct: 1 MDHVIYTAMGAARQTLEHQAVTANNLANASTPGFKAQLAALRSV--PIEGETLPTRTLTV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGS-LVSAS 118 + + G T LD A+ + A++ TR+G +++ +G +V Sbjct: 59 ASTPGMDSRQGPMNYTSRPLDVAVGQGGFLAVQLDDGTEAYTRNGGIQMSPEGQLMVQGR 118 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ-GFVRRENSG- 176 VP Q S ++ +G + + G V R + G Sbjct: 119 MLMGENGPIDVPPQAELTIAADGAISALIASDPPTLLGQIGKLKIVKPEAGQVVRGDDGL 178 Query: 177 -----ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 + L + V + G LE SN N + M MI ++F +I ++ Sbjct: 179 FHLTPQAREQQGNELAASTEVKIMPGVLEGSNVNPVESMVNMIANARRFEMQMKVIHSSD 238 Query: 232 KSMLEAIRNIA 242 ++ A + +A Sbjct: 239 ENAQRANQILA 249 >gi|77463651|ref|YP_353155.1| flagellar proximal rod protein FlgF [Rhodobacter sphaeroides 2.4.1] gi|77388069|gb|ABA79254.1| flagellar proximal rod protein FlgF [Rhodobacter sphaeroides 2.4.1] Length = 251 Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 86/249 (34%), Gaps = 8/249 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTV-ADNMSNTDTVGFRTIKVKFSEV-VGAIKNDIDQKISF 58 M + L + A + + A N++N GFR + + + Sbjct: 1 MDRLIHTALNSL-ANLRDTRVIQAQNLANQTVPGFRRDLTNEGDARFLKAMDAASARAFQ 59 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSA 117 G S G TG +D A+ + WF ++ G L+R G ++T DG L++ Sbjct: 60 TERGPHLFSSAPGLLNQTGEPMDVAIAEEGWFFVQPEGGEPALSRRGDLRLTADGRLLNG 119 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM---GLYSVDMSQGF-VRRE 173 +G+ + P + I + + + L + + G +R++ Sbjct: 120 AGEAMLDPAMQPIELPPVRALIVDETGRILYEPQDGPPGQQVEGPLIATTIPDGVTLRKD 179 Query: 174 NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 G V +G LE SN N+M E+ I L + F +I ++ Sbjct: 180 PDGRIRAGGEPLPPPDQRARVLQGVLEGSNVNTMEELVSSIELQRTFELNLRMISSAKEL 239 Query: 234 MLEAIRNIA 242 R + Sbjct: 240 DESGARLLR 248 >gi|258622489|ref|ZP_05717511.1| Flagellar basal-body rod protein flgF [Vibrio mimicus VM573] gi|258585189|gb|EEW09916.1| Flagellar basal-body rod protein flgF [Vibrio mimicus VM573] Length = 243 Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats. Identities = 45/244 (18%), Positives = 91/244 (37%), Gaps = 8/244 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + ++N+SN DT GFR + + + V Sbjct: 1 MDNLLFTATSGASRVLKAQHVRSNNLSNADTAGFRADMERAESF--QLYGSGFDGRTMVV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119 + + G I TG LD A+ G+ + +E+P+G TR G KV G++ Sbjct: 59 TNSATTRFDSGDVIKTGRPLDVAIIGEGYLTVEAPQGGEAYTRAGNIKVDAFGAM--TIN 116 Query: 120 KYPVLDMASVP--IQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177 +PVL + + + + G I L +++E+ + Sbjct: 117 GFPVLGESGPMVLPEYQKIEIGERGQVSVIPPGGGAKIEVGTLKLTKPPIDQLQKESDSL 176 Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 N+ P V + +E SN +++ E+ ++ LT+ F ++ +++ +A Sbjct: 177 LHNVNGEPFPVDETVQLVPEHVEGSNVSAVDELLSVMSLTRNFEMQVRMMKSA-ETLAQA 235 Query: 238 IRNI 241 + Sbjct: 236 GNKL 239 >gi|325927876|ref|ZP_08189100.1| flagellar basal-body rod protein FlgF, proteobacterial [Xanthomonas perforans 91-118] gi|325541716|gb|EGD13234.1| flagellar basal-body rod protein FlgF, proteobacterial [Xanthomonas perforans 91-118] Length = 243 Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats. Identities = 57/237 (24%), Positives = 94/237 (39%), Gaps = 10/237 (4%) Query: 9 LAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSK 68 + A Q STV+ N++N DTVGF+ I+ + + Sbjct: 1 MTGARASLQAQSTVSHNLANVDTVGFKAALANTEAF--KIQGKGYPSRIDALHVDQGFDR 58 Query: 69 EVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYPVLDMA 127 G TG LD +L+ D W A++SP TR+G +T +G LV+A+G + + Sbjct: 59 SQGHQKVTGNPLDVSLQQDRWLAVQSPDGSEAYTRNGELALTANGQLVTANGHAVLDEGG 118 Query: 128 SVPIQIPQKDEIFNVGEKGEISQKGKVIATMG----LYSVDMSQGFVRRENSGISPNIPP 183 + P + I +G+ TM + VD + R G+ N Sbjct: 119 NPMTIPPHQAMEIGSDGSISIIPQGEGPQTMAIVGKMKVVDAPADRLTRRPDGLMRNTST 178 Query: 184 TPLEDLSGVT---VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 P + + T V G LE SN ++ + +MI L ++F +I + + A Sbjct: 179 DPAQAFAVATGKTVNSGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNGDDNAQSA 235 >gi|319648038|ref|ZP_08002255.1| FlhP protein [Bacillus sp. BT1B_CT2] gi|317389673|gb|EFV70483.1| FlhP protein [Bacillus sp. BT1B_CT2] Length = 271 Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats. Identities = 51/270 (18%), Positives = 101/270 (37%), Gaps = 35/270 (12%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66 L++++ ++ N++NTDT G++ FSE++ +++K + VA+ ++ Sbjct: 3 TASNTMFELQKQIDNISHNLANTDTTGYKAKNTSFSELIRQQIEQVNEKNNEVAASRKTP 62 Query: 67 S---------------KEVGSFISTGTELDFALEGDA-WFALESPRGIILTRDGRFKV-- 108 + GS TG +LD AL +F + + TRDG F + Sbjct: 63 PGLRLGVGAVMTDRLTHKQGSLKETGRDLDIALTSPYQYFQVNVGGEVQYTRDGAFYLTP 122 Query: 109 ---TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEIS-------------QKG 152 + + + VLD I+ Q+ + V E G ++ G Sbjct: 123 AAGNANQMQLVTKEGHAVLDENGNAIRFNQRYKHIKVDESGSVTVSSDNQGEAPLRFNLG 182 Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQ 212 V A + + + + +++K+GFLE SN + EM Sbjct: 183 IVRAVKPQALTEEGSNLFSVSDELRATALINLNGAGRQDISLKQGFLESSNVDVSKEMTD 242 Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 +I + + + I ++ M I ++ Sbjct: 243 LISSQRSYQMNSRAITMGDQMMG-LINSVR 271 >gi|94969949|ref|YP_591997.1| flagellar basal-body rod protein FlgG [Candidatus Koribacter versatilis Ellin345] gi|94551999|gb|ABF41923.1| flagellar basal-body rod protein FlgG [Candidatus Koribacter versatilis Ellin345] Length = 244 Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats. Identities = 51/247 (20%), Positives = 101/247 (40%), Gaps = 12/247 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND-----IDQK 55 M T + A +A Q+L A +++N +T G+R+ + F V+ Sbjct: 1 MDTGSYVACAGLVARSQQLDLAAQDLANINTSGYRSQRSAFRAVLAKSAGANLTGWSAAV 60 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115 +F G+ LS+ G+ TG LD LEGD +F +++P G TR G F+++ G+L Sbjct: 61 NNFGTLGETRLSRTPGNLEKTGNPLDLGLEGDGFFVVQTPAGPRYTRRGNFQISSAGALE 120 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 ++ G + + + + G +S G + + + S S Sbjct: 121 TSDGY----PVQGSLGTVRVPNGELAISADGTLSVDGAIAGKLKVVQFAPSTQLQAESGS 176 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE-NEKSM 234 S + +V++G +E SN N++ Q++ L + + + + + Sbjct: 177 YYSAPAGR--ESPAANTSVRQGMIESSNVNAIASSIQLVTLQRTAEMLQRALTTFHSEFD 234 Query: 235 LEAIRNI 241 A+ ++ Sbjct: 235 RTAVEDL 241 >gi|311070151|ref|YP_003975074.1| flagellar basal-body rod protein [Bacillus atrophaeus 1942] gi|310870668|gb|ADP34143.1| flagellar basal-body rod protein [Bacillus atrophaeus 1942] Length = 271 Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats. Identities = 44/273 (16%), Positives = 96/273 (35%), Gaps = 35/273 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVV----------GA 47 M +A ++ ++R +++N++N +T G++ + F +++ G Sbjct: 1 MLKGLYTATSAMISQQRRTEMLSNNIANANTSGYKEDQGSMRAFPDMLLSRIEAKSPGGV 60 Query: 48 IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA--------------WFALE 93 K +I + V + GS ST D AL + + Sbjct: 61 SKKEIGSLNTGVYMQELKPLFTQGSLQSTDQPTDIALVENQLPVNGETNENAALFYPVET 120 Query: 94 SPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK 153 + + ++ F + ++ + ++ +G + I +E F V E G ++ G+ Sbjct: 121 ANGDVRYSKSSTFSLNEN-NQLTINGNPVLSTDGQP---ITVDNENFTVSENGTVTTNGR 176 Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV----TVKRGFLEDSNANSMYE 209 + + + + R N S ++K+G E SN + Sbjct: 177 TAGQIDIRMEEDVRNLKRDGNDLYSTADGNDLPSAAGNPEVSYSLKQGLSELSNVDVTSA 236 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 +M + F + +I +KSM +A I Sbjct: 237 YTEMTEAYRTFEANQKVIQAYDKSMDKAANEIG 269 >gi|221639494|ref|YP_002525756.1| Flagellar proximal rod protein FlgF [Rhodobacter sphaeroides KD131] gi|221160275|gb|ACM01255.1| Flagellar proximal rod protein FlgF [Rhodobacter sphaeroides KD131] Length = 251 Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 86/249 (34%), Gaps = 8/249 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTV-ADNMSNTDTVGFRTIKVKFSEV-VGAIKNDIDQKISF 58 M + L + A + + A N++N GFR + + + Sbjct: 1 MDRLIHTALNSL-ANLRDTRVIQAQNLANQTVPGFRRDLTNEGDARFLKAMDAASARAFQ 59 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSA 117 G S G TG +D A+ + WF ++ G L+R G ++T DG L++ Sbjct: 60 TERGPHLFSSAPGLLNQTGEPMDVAIAEEGWFFVQPEGGEPALSRRGDLRLTADGRLLNG 119 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM---GLYSVDMSQGF-VRRE 173 +G+ + P + I + + + L + + G +R++ Sbjct: 120 AGEAMLDPAMQPIELPPVRALIVDETGRILYEPQDGPPGQQVEGPLIATTIPDGVTLRKD 179 Query: 174 NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 G V +G LE SN N+M E+ I L + F +I ++ Sbjct: 180 PDGRIRARGEPLPPPDQRARVLQGVLEGSNVNTMEELVSSIELQRTFELNLRMISSAKEL 239 Query: 234 MLEAIRNIA 242 R + Sbjct: 240 DESGARLLR 248 >gi|212709493|ref|ZP_03317621.1| hypothetical protein PROVALCAL_00535 [Providencia alcalifaciens DSM 30120] gi|212687831|gb|EEB47359.1| hypothetical protein PROVALCAL_00535 [Providencia alcalifaciens DSM 30120] Length = 251 Score = 122 bits (305), Expect = 4e-26, Method: Composition-based stats. Identities = 45/252 (17%), Positives = 80/252 (31%), Gaps = 16/252 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + S V++N++N T GF+ V I D +Q + V Sbjct: 1 MDHVIYTAMGGARHALENQSIVSNNIANVSTAGFKAQLSAMRAV--PIHGDTEQTRTLVV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGS-----L 114 + G TG +D AL + A+ TR+G +++ DG Sbjct: 59 ASTPGADMSQGQLNYTGRPMDVALNDKHFLAVALGDGTEAYTRNGNIQISPDGELMIGER 118 Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-----IATMGLYSVDMSQGF 169 V + + + I I + + G++ + V G Sbjct: 119 VLQGDGGAINVPPNAELTIGNDGTITALLATDPPTMLGQIGRLKVVEAQAQDLVRGEDGL 178 Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 + N P+ V G +E SN N+ M MI + F +I Sbjct: 179 FHLSPQAQAANGNGLPM--SERAIVTSGVIEGSNVNAAEAMVSMIANARHFEMQMKVIRS 236 Query: 230 NEKSMLEAIRNI 241 +++ A + Sbjct: 237 ADENAQRA-NQL 247 >gi|226315011|ref|YP_002774907.1| flagellar basal-body rod protein [Brevibacillus brevis NBRC 100599] gi|226097961|dbj|BAH46403.1| flagellar basal-body rod protein [Brevibacillus brevis NBRC 100599] Length = 329 Score = 122 bits (305), Expect = 4e-26, Method: Composition-based stats. Identities = 56/325 (17%), Positives = 100/325 (30%), Gaps = 83/325 (25%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTI---KVKFSEVVGAIKND------ 51 M + LAL+ R ++A+N++N +T GF+ F E + + ND Sbjct: 1 MIRGLYTSASGMLALQNRQESLANNLANINTPGFKQDVGVMRAFPEQLLSRMNDKEGLDV 60 Query: 52 ------------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE------ 93 I + + V + + G T D AL + Sbjct: 61 PGIPTMPGQPAIIGRLNTGVYMSEALPNFAQGDIEETRNPYDLALMDNIQPDQNGNERRL 120 Query: 94 ----------------SPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKD 137 I TR+G + V DG LV+A G Y + Sbjct: 121 FYSVARIEQANLAQPAQQEDIRYTRNGNWSVNSDGYLVTAEGYYVLDSSNQAIRINHDPT 180 Query: 138 EIFNVGEKGEISQKGKVI-------------------ATMGLYSVDMSQGFVRRENS--- 175 NVG+ +IS++G+++ A +GL V Q VR + Sbjct: 181 LGTNVGQNLKISERGELMQVTIDPITKAEQYTALPTHARLGLAVVTDPQKLVREGTNVFR 240 Query: 176 ------------------GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217 + ++G+ E SN + M M+ + Sbjct: 241 FEGDIAVEGIDLAEANDQAAITAGTYNTPTVVGRFGTQQGWRERSNVDPAQTMTSMMSVL 300 Query: 218 QKFNSITTLIDENEKSMLEAIRNIA 242 + + + +I + ++ +A I Sbjct: 301 RAYEANQRVITTIDGTLEKAANEIG 325 >gi|262173355|ref|ZP_06041032.1| flagellar basal-body rod protein FlgF [Vibrio mimicus MB-451] gi|261890713|gb|EEY36700.1| flagellar basal-body rod protein FlgF [Vibrio mimicus MB-451] Length = 243 Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats. Identities = 43/242 (17%), Positives = 88/242 (36%), Gaps = 4/242 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + ++N+SN DT GFR + + + V Sbjct: 1 MDNLLFTATSGASRVLKAQHVRSNNLSNADTAGFRADMERAESF--QLYGSGFDGRTMVV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119 + + G I TG LD A+ G+ + +E+P+G TR G KV G++ Sbjct: 59 TNSATTRFDSGDVIKTGRPLDVAIIGEGYLTVEAPQGGEAYTRAGNIKVDAFGAMTINGF 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 + V + + + G I L +++E+ + Sbjct: 119 PVLGESGSMVLPEYQKIEIGERGQVSVIPPGGGAKIEVGTLKLAKPPIDQLQKESDSLLH 178 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 N+ P V + +E SN +++ E+ ++ LT+ F ++ +++ +A Sbjct: 179 NVNGEPFPVDETVQLVPEHVEGSNVSAVDELLSVMSLTRNFEMQVRMMKSA-ETLAQAGN 237 Query: 240 NI 241 + Sbjct: 238 KL 239 >gi|188590007|ref|YP_001920227.1| flagellar basal body rod protein FlgG [Clostridium botulinum E3 str. Alaska E43] gi|188500288|gb|ACD53424.1| flagellar hook-basal body complex protein [Clostridium botulinum E3 str. Alaska E43] Length = 257 Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats. Identities = 52/259 (20%), Positives = 104/259 (40%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVV----------GA 47 M F ++ + LE TV +N+ N + G++ + F +V+ Sbjct: 1 MIRGFYTAVSGLITLENEQQTVTNNIVNVNNNGYKKNTLTKQSFEDVLITNRQNKVGDRH 60 Query: 48 IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107 I N + V G+F +T + DF ++G +FA++ + TR G FK Sbjct: 61 IPNKLGNLNFGVKVNDVSTIYTQGAFKATDSYTDFGIDGRGFFAVQRGNERLFTRSGDFK 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGE---ISQKGKVIATMGLYSVD 164 + G L++ +G Y + + + P G S G+ T+ + Sbjct: 121 IDQQGYLITGNGDYVLGRNNATGAEEPIYVGKDEFSLDGNNKLQSATGESTYTLLTADFE 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224 + + ++ S N P + V V++G LE SN N E+ +++ + ++F + Sbjct: 181 DYKSLEKLGDNYYSANNP----IYNAVVNVRQGVLETSNVNPTEELVKLMEIKRQFETNQ 236 Query: 225 TLIDENEKSMLEAIRNIAS 243 + ++++ +A I S Sbjct: 237 KFVSMQDETVQKAANEIGS 255 >gi|295707198|ref|YP_003600273.1| flagellar hook-basal body complex protein FlhP [Bacillus megaterium DSM 319] gi|294804857|gb|ADF41923.1| flagellar hook-basal body complex protein FlhP [Bacillus megaterium DSM 319] Length = 273 Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats. Identities = 49/274 (17%), Positives = 96/274 (35%), Gaps = 32/274 (11%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + L+Q+L + N+SNT+T G++ F++++ N+ + Sbjct: 1 MNRTMITAANTMGQLQQQLDVIGHNLSNTNTTGYKARDASFNDMLYQQVNNQEDKGTEKR 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL----ESPRGIILTRD 103 ++ + + L+ GSF +T LD A+ + +S + + TRD Sbjct: 61 LTPAGIRQGTGAYLDQTSLNMMQGSFQNTDKLLDVAVSNPNVYFQVAVNDSQQPVQYTRD 120 Query: 104 GRFKVTDDG---SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGE---ISQKGKVIAT 157 G F ++ G + VL I + + G + KG T Sbjct: 121 GSFHISPQGPNNVKLVNGSGQDVLGENGQAIIFSNAFKDIQIDGSGTITVTTNKGVDQFT 180 Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPLEDL--------SGVTVKRGFLEDSNANSMYE 209 +GL +V Q + + + V++G LE SN + E Sbjct: 181 LGLTNVQKPQVLEAKGENLFAFPAEMNQPNMFTDLTGKARETAGVEQGKLEQSNVDLSKE 240 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 + M + + + I ++ M + I + Sbjct: 241 LTDMSIAQRAYQFNSRSISIADQMMG-LVNGIRA 273 >gi|37525842|ref|NP_929186.1| flagellar basal-body rod protein FlgF (putative proximal rod protein) [Photorhabdus luminescens subsp. laumondii TTO1] gi|36785271|emb|CAE14212.1| Flagellar basal-body rod protein FlgF (Putative proximal rod protein) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 251 Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats. Identities = 41/254 (16%), Positives = 79/254 (31%), Gaps = 17/254 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + A+N++N T GF+ V ++ + V Sbjct: 1 MDHVIYTAMGGARQTLEHQAVTANNLANASTPGFKAQLAALRAV--PVEGAAFNTRTLVV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G T LD A+ + A++ TR+G +++ +G ++ G Sbjct: 59 ASTPGSDNRQGPMNYTSRPLDVAIGQGGYLAVQLEDGSEAYTRNGSIQISAEG-QLTVQG 117 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-----------IATMGLYSVDMSQG 168 + D + I + + G + + V G Sbjct: 118 NLLMGDNGPINIPPQAELTLATDGSISALIPGDPPTQLGQLGRLKMVKPESDQLVRGDDG 177 Query: 169 FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228 P V + G LE SN N M M MI ++F +I Sbjct: 178 LFHMTEQAQGLQGDVLPA--SDEVKLMPGVLEGSNVNPMESMVSMIANARRFEMQMKVIH 235 Query: 229 ENEKSMLEAIRNIA 242 ++++ A + +A Sbjct: 236 SSDENAQRANQLLA 249 >gi|296447447|ref|ZP_06889372.1| flagellar basal-body rod protein FlgF [Methylosinus trichosporium OB3b] gi|296255067|gb|EFH02169.1| flagellar basal-body rod protein FlgF [Methylosinus trichosporium OB3b] Length = 240 Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats. Identities = 76/242 (31%), Positives = 136/242 (56%), Gaps = 4/242 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 MQ++F + L+AQL++++R+ T+A+N++N T G+R V F VV D +++ + Sbjct: 1 MQSAFYVSLSAQLSIDKRMETIANNIANAATAGYRADGVSFESVVTKTGADA---VAYAS 57 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 +G++Y+S+ G TG D A+ A+FA+ +P G+ TRDGR K+T+ G L + G Sbjct: 58 AGRDYVSRVAGDMQRTGDPFDVAVVRRAFFAIRTPDGVAYTRDGRMKMTETGDLQTV-GG 116 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 YP+LD + + + + G I+Q G+ I +GL+ +D R + + P+ Sbjct: 117 YPILDAGNSAVVLDPTAGPPMISRDGMINQAGRQIGAIGLFMIDGDVKLSRGPGASVIPD 176 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 P T + D V++G +E +N N + EM ++I ++ F S++++ D + S +AIR Sbjct: 177 KPATAVLDFGRNGVEQGVVETANVNPVREMVKLISASRAFESVSSMNDLLDSSQRDAIRT 236 Query: 241 IA 242 I Sbjct: 237 IG 238 >gi|297585402|ref|YP_003701182.1| fagellar hook-basal body protein [Bacillus selenitireducens MLS10] gi|297143859|gb|ADI00617.1| fagellar hook-basal body protein [Bacillus selenitireducens MLS10] Length = 276 Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats. Identities = 44/277 (15%), Positives = 99/277 (35%), Gaps = 36/277 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ------ 54 M S L+++L TV +N++N +T+GF+ V F++++ N++++ Sbjct: 1 MNQSMINSAVTMGQLQKKLDTVGNNLANVNTIGFKRRDVSFNDLLFQQVNNLNRTEFEGG 60 Query: 55 --------KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI---ILTRD 103 + + +G+ + + G+ TG +LDFA+ +F +P TR+ Sbjct: 61 RDTPLGIRRGTGAIAGQTEIRFDQGAIRETGRDLDFAMTEKGYFFEIAPDEEGNRRFTRE 120 Query: 104 GRFKV------TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV--- 154 G F + +V++ G + + + + + + + Sbjct: 121 GNFYYTPNPADDAENFIVNSQGDFVLGADGEPLVVPVPNEGVTVLNNGTVRVNFAEDEEV 180 Query: 155 -IATMGLYSVDMSQGFVRRENSGISPNI--------PPTPLEDLSGVTVKRGFLEDSNAN 205 I + ++ Q + + + V + LE SN + Sbjct: 181 DIGQFQMVNITRPQLLQNVGENNFVFGDLDELGLGFDDVLEDAVGENVVLQRALEMSNVD 240 Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 EM MI + + + I ++ M + N+ Sbjct: 241 MSREMTSMIEAQRAYQFNASAIGITDQ-MKGLVTNLR 276 >gi|258625233|ref|ZP_05720145.1| Flagellar basal-body rod protein flgF [Vibrio mimicus VM603] gi|258582480|gb|EEW07317.1| Flagellar basal-body rod protein flgF [Vibrio mimicus VM603] Length = 243 Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats. Identities = 45/244 (18%), Positives = 91/244 (37%), Gaps = 8/244 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + ++N+SN DT GFR + + + V Sbjct: 1 MDNLLFTATSGASRVLKAQHVRSNNLSNADTAGFRADMERAESF--QLHGAGFDGRTMVV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119 + + G I TG LD A+ G+ + +E+P+G TR G KV G++ Sbjct: 59 TNSATTRFDSGDVIKTGRPLDVAIIGEGYLTVEAPQGGEAYTRAGNIKVDAFGAM--TIN 116 Query: 120 KYPVLDMASVP--IQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177 +PVL + + + + G I L +++E+ + Sbjct: 117 GFPVLGESGPMVLPEYQKIEIGERGQVSVIPPGGGAKIEVGTLKLTKPPIDQLQKESDSL 176 Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 N+ P V + +E SN +++ E+ ++ LT+ F ++ +++ +A Sbjct: 177 LHNVNGEPFPVDETVQLVPEHVEGSNVSAVDELLSVMSLTRNFEMQVRMMKSA-ETLAQA 235 Query: 238 IRNI 241 + Sbjct: 236 GNKL 239 >gi|225850286|ref|YP_002730520.1| flagellar basal-body rod protein FlgF [Persephonella marina EX-H1] gi|225645268|gb|ACO03454.1| flagellar basal-body rod protein FlgF [Persephonella marina EX-H1] Length = 238 Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats. Identities = 54/239 (22%), Positives = 105/239 (43%), Gaps = 11/239 (4%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV-KFSEVVGAIKNDIDQKISFVASGK 63 I + ++L T ++N++N +T GF+ + + + S+ + K + F Sbjct: 8 IYILASGGARAIEQLDTTSNNLANVNTPGFKKLLMREMSQTIPENKGNKKHLFVFPRFQD 67 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPV 123 + G+ T LD A+ G +F +E+ +G+ LTR G F + DG +V +G Y + Sbjct: 68 TPVILSQGALKKTDNPLDIAIFGSGFFTIETGQGVFLTRSGHFLLNSDGYIVDPNGNYLL 127 Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183 ++ V + GEI QKGK +A + + + + + G +P Sbjct: 128 --DREGKRIKLEESSGITVNQNGEIFQKGKKVARINIVNYENIRHIGHSYYQGEGQEVP- 184 Query: 184 TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 + ++K+GFLE SN N + M ++I+ ++F L+ + ++ I Sbjct: 185 ------ADYSLKQGFLEQSNTNGIEAMIELINAQRRFEIYGNLMRSLDAMEQKS-NEIG 236 >gi|222834411|gb|EEE72888.1| predicted protein [Populus trichocarpa] Length = 280 Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats. Identities = 54/228 (23%), Positives = 92/228 (40%), Gaps = 13/228 (5%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTG 77 + + V++N++N T F+ + V + Q +F + + G TG Sbjct: 51 QQAAVSNNLANASTTAFKAQVNMYRAV--PVVGQETQTRAFTLASTPGADMKAGPLSYTG 108 Query: 78 TELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQK 136 LD AL+G+ W A++ P TR G +V+ DG L ++ G + D + I Sbjct: 109 RNLDVALQGNGWLAVQMPDGSEAYTRAGSLQVSPDGQLQTSLGLPVMGDGGPIGI---PP 165 Query: 137 DEIFNVGEKGEISQKGKVIATMGLYSV-------DMSQGFVRRENSGISPNIPPTPLEDL 189 ++G G ++ +G A GL V +G R ++ PL+ Sbjct: 166 GSTVSIGTDGTVTARGPGEAANGLAQVGKLRVVTPPPEGLARGDDGYFRLRPGVDPLQQD 225 Query: 190 SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 V V G LE SN N + M +MI ++F +I + + A Sbjct: 226 PNVRVISGALEGSNVNPVESMVEMIANARRFEMQMKMITGADSNDQRA 273 Score = 64.1 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 9/48 (18%), Positives = 21/48 (43%) Query: 191 GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 T++ G +E+SN + ++ +I + + + I + M I Sbjct: 1 MGTLQSGSVEESNVDLSGQLVNLIVAQRNYQANAQTIKAQDTVMQTLI 48 >gi|291562041|emb|CBL40857.1| fagellar hook-basal body proteins [butyrate-producing bacterium SS3/4] Length = 265 Score = 122 bits (305), Expect = 6e-26, Method: Composition-based stats. Identities = 47/266 (17%), Positives = 93/266 (34%), Gaps = 27/266 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---F-SEVVGAIKN------ 50 M F + L + L+T+++NM N T G++ + F E++ Sbjct: 1 MYQGFYNLASGMLTQSRNLNTISNNMVNIQTPGYKNETMVSSTFKEEMLYRTGQYSKENP 60 Query: 51 -DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109 + + + Y + + G T DFAL G+ +F +++ +GI TR+G F V Sbjct: 61 TQLATVSKIKTAKQVYTNYDQGGLEQTDGIYDFALNGNGFFCIQTSQGIRYTRNGSFSVD 120 Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIF-------------NVGEKGEISQKGKVIA 156 DG LV + + + + E G + Sbjct: 121 KDGYLVLNQAGRVLNKEGQPVQIKNENFTVDSKGHITAAITNQSDGEESGSQEVTIEDYG 180 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 T+ + +N S + TV+ LE SN + + +M M+ Sbjct: 181 TLKVVDFPDQGQLHAEDNGLFSTA---QAETTPADTTVQWKMLEKSNVDMVEQMTAMMSS 237 Query: 217 TQKFNSITTLIDENEKSMLEAIRNIA 242 + S + ++ M +++ ++ Sbjct: 238 QRALQSAAQSLKMYDQIMSKSVSDVG 263 >gi|170722890|ref|YP_001750578.1| flagellar basal body rod protein FlgF [Pseudomonas putida W619] gi|169760893|gb|ACA74209.1| flagellar basal-body rod protein FlgF [Pseudomonas putida W619] Length = 248 Score = 122 bits (305), Expect = 6e-26, Method: Composition-based stats. Identities = 45/245 (18%), Positives = 91/245 (37%), Gaps = 9/245 (3%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + + A+N++N T GF+ + + + D +F + Sbjct: 4 DKMLYVAMTGASQNALAQKAHANNLANISTNGFQRDLEQARSM--PVFGDSFPSRAFAMT 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGK 120 + G + TG +LD A+ G + A+++P R G + G L + +G Sbjct: 62 ERPATDFSEGPMVETGRDLDVAVAGQGFIAVQAPDGSEAYVRTGSLNIDALGVLRAGNGM 121 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV---IATMGLYSVDMSQGFVRRENSGI 177 + + + I QK E+ G S + V+ + + G+ Sbjct: 122 PVIGNGGPIAIPPEQKVEVGADGTISIRSMGEDPRVMAEVDRIKLVNPDTKGLTKGLDGL 181 Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN---EKSM 234 P V V GFLE SN N++ EM ++ L+++F +++ +++M Sbjct: 182 IHTTSGQPAAADVNVKVVSGFLEGSNVNAVEEMTSVLALSRQFELHVKMMNAAKEGDEAM 241 Query: 235 LEAIR 239 ++ Sbjct: 242 ARVLQ 246 >gi|291562042|emb|CBL40858.1| fagellar hook-basal body proteins [butyrate-producing bacterium SS3/4] Length = 263 Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats. Identities = 48/264 (18%), Positives = 97/264 (36%), Gaps = 24/264 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------Q 54 M SF G A ++LS V++N++N + GF+ FSE++ ND + Q Sbjct: 1 MNMSFYTGAAGAGQFTKKLSVVSNNLANINNTGFKPKTAAFSELIHYNLNDSENAQTELQ 60 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR---GIILTRDGRFKV--T 109 S + + TG E D+A+ F + I TR+G F Sbjct: 61 TGSGARVERTWTDFSTAGATQTGKEYDYAIMEPNAFFMIQDPASGEITYTRNGHFHRGER 120 Query: 110 DDGSLVSASGKYPVLDMASVPIQIP-----------QKDEIFNVGEKGEISQKGKVIATM 158 +DG ++ VLD P+++ + ++ + + ++ + + Sbjct: 121 EDGFYLTTEDGKLVLDQNRQPLKLEVTDVEKLQEESESEDDDYDTDDTDSTEDDTDLPKV 180 Query: 159 GLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 +Y+ + S +++G LE+S + EM +I + Sbjct: 181 SVYTFSNPSRLLS-VGDNEYKAQDGMEASLKSDAVLQKGALENSGTDMAKEMVHVIECQR 239 Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242 F+ +I ++ + I ++ Sbjct: 240 AFSYAVKMITTSDD-IEGTINSLR 262 >gi|27380938|ref|NP_772467.1| flagellar basal body rod protein FlgF [Bradyrhizobium japonicum USDA 110] gi|27354104|dbj|BAC51092.1| flagellar basal-body rod protein [Bradyrhizobium japonicum USDA 110] Length = 253 Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats. Identities = 55/251 (21%), Positives = 112/251 (44%), Gaps = 11/251 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN-----DIDQK 55 MQ + IGL+ Q+ LE+++ +A+N++N +T GF+ F E + + D++ Sbjct: 1 MQNALLIGLSRQMTLERQMDVIANNVANANTNGFKADHSLFEEFLNSNAREDNFVGSDRR 60 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115 +S+V + G +T LD A+ G+A+FA+++ TRDG+F ++ G LV Sbjct: 61 VSYVQDRGTFRDVGQGPMEATNNPLDMAINGNAFFAVQANGAERYTRDGKFTLSSTGQLV 120 Query: 116 SASGKYPVLDM----ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171 ++ G + V ++ + + + + D + Sbjct: 121 TSDGNLVLGTAGPITFQPTDHDINIAPDGTVTVLEGTAKTDSIRGKIRMVTFDDPAKLTK 180 Query: 172 RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 + + + + TV++G++E SN NS+ EM +M+ + + + +I L+ + Sbjct: 181 LGANLY--SAGSANQQVDTKSTVQQGYIEKSNVNSVGEMSRMVEVMRSYTAIANLLQQQS 238 Query: 232 KSMLEAIRNIA 242 AI +A Sbjct: 239 DLHKSAIEKLA 249 >gi|293605004|ref|ZP_06687400.1| flagellar basal-body rod protein FlgF [Achromobacter piechaudii ATCC 43553] gi|292816609|gb|EFF75694.1| flagellar basal-body rod protein FlgF [Achromobacter piechaudii ATCC 43553] Length = 253 Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats. Identities = 52/247 (21%), Positives = 98/247 (39%), Gaps = 11/247 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + ++ + +++NM+N +T GFR + V + ++S VA Sbjct: 1 MDRIIYTAMNGAARITEQQAAISNNMANVNTTGFREQIALYRSVPVTDGVSLPTRVSTVA 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDA-WFALESPRGIILTRDGRFKVTDDGSLVSASG 119 S S E+G+ +TG +LD AL + W A+++P+G TR G +V +G L ++ G Sbjct: 61 S-TPGNSFEMGNMQTTGRDLDVALSSERGWIAVQTPQGEAYTRGGSLQVGINGLLQTSLG 119 Query: 120 KYPVLDMASVPIQIPQ----KDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 + + D Q + G ++ + + + + + Sbjct: 120 QPVLSDQGGPIDVPDQAALTITSDGTITAIGAGDGPNNILNLGRIKLANPNNAQLVHGDD 179 Query: 176 GISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 G+ P V G LE SN N M M MI ++F +I ++ Sbjct: 180 GVFRLAPVNGQPAPPAPADPSLRVLSGVLEGSNTNPMKAMVGMIENARRFEQQMQVIQQS 239 Query: 231 EKSMLEA 237 +++ A Sbjct: 240 DRNAERA 246 >gi|332558507|ref|ZP_08412829.1| FlgF [Rhodobacter sphaeroides WS8N] gi|332276219|gb|EGJ21534.1| FlgF [Rhodobacter sphaeroides WS8N] Length = 251 Score = 121 bits (304), Expect = 7e-26, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 86/249 (34%), Gaps = 8/249 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTV-ADNMSNTDTVGFRTIKVKFSEV-VGAIKNDIDQKISF 58 M + L + A + + A N++N GFR + + + Sbjct: 1 MDRLIHTALNSL-ANLRDTRVIQAQNLANQTVPGFRRDLTNEGDARFLKAMDAASARAFQ 59 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSA 117 G S G TG +D A+ + WF ++ G L+R G ++T DG L++ Sbjct: 60 TERGPHLFSSAPGLLNQTGEPMDVAIAEEGWFFVQPEGGEPALSRRGDLRLTADGRLLNG 119 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM---GLYSVDMSQGF-VRRE 173 +G+ + P + I + + + L + + G +R++ Sbjct: 120 AGEAMLDPAMQPIELPPVRALIVDETGRILYEPQDGPPGQQVEGPLIATTIPDGVTLRKD 179 Query: 174 NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 G V +G LE SN N+M E+ I L + F +I ++ Sbjct: 180 PDGRIRAGGEPLPTPDQRARVLQGVLEGSNVNTMEELVSSIELQRTFELNLRMISSAKEL 239 Query: 234 MLEAIRNIA 242 R + Sbjct: 240 DESGARLLR 248 >gi|146341903|ref|YP_001206951.1| flagellar basal body rod protein FlgF [Bradyrhizobium sp. ORS278] gi|146194709|emb|CAL78734.1| putative flagellar basal-body rod protein (flgF or flgG) [Bradyrhizobium sp. ORS278] Length = 254 Score = 121 bits (304), Expect = 7e-26, Method: Composition-based stats. Identities = 56/251 (22%), Positives = 113/251 (45%), Gaps = 10/251 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN-----DIDQK 55 M+ + IGL+ Q+ LE++L VA+N++N +T GF+ + F E + + + +K Sbjct: 1 MENALLIGLSRQMVLERQLDVVANNVANVNTNGFKADQQLFEEYLSSGAHEDNFPGAARK 60 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115 +S+V Y GS TG LD A+ GD + +++ G TRDG + + G LV Sbjct: 61 VSYVQDRGTYRDFTQGSTERTGNALDVAISGDGFLTVQTAGGERYTRDGNLHMNNTGQLV 120 Query: 116 SASGKYPVLDM----ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171 +A+G + V +++ + + + S Q + Sbjct: 121 TAAGDLVLGTGGPIVFQPTDHDINISPDGTVTVVEGVNRTDSIRGKLRIVSFADPQKAQK 180 Query: 172 RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 + N+ + + + + TV++G++E SN +++ EM +M+ + + + + ++ Sbjct: 181 QGNNLYA-AVGGAAPQQDTKSTVQQGYIEKSNVSAVGEMSKMVEVMRAYTQVANMLQVQS 239 Query: 232 KSMLEAIRNIA 242 AI +A Sbjct: 240 DLRKSAIEKLA 250 >gi|294635611|ref|ZP_06714088.1| flagellar basal-body rod protein FlgF [Edwardsiella tarda ATCC 23685] gi|291091063|gb|EFE23624.1| flagellar basal-body rod protein FlgF [Edwardsiella tarda ATCC 23685] Length = 251 Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats. Identities = 48/251 (19%), Positives = 86/251 (34%), Gaps = 14/251 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A+NM+N+ T GFR V + + + + V Sbjct: 1 MDHAIYTAMGAASQTLNQQAIAANNMANSTTPGFRAQLAALRAV--PVDGESLETRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + +G T LD AL+ D W A++ P TR+G ++ G +++A G Sbjct: 59 ASTPMHDLSMGKLDYTERPLDVALQQDGWLAVQMPDGSEAYTRNGSLQINPQG-MLTAQG 117 Query: 120 KYPVLDMAS---VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + D + G + L V S V + G Sbjct: 118 HLVMGDNGPIAVPDRAQLTIAADGTITALGAGDKPNATTQIGRLKLVKASAQEVVHGDDG 177 Query: 177 ISPNIPPTPLEDLSGV------TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + P + + + V G LE SN + M MI ++F +I Sbjct: 178 LFHLTPEAEQQRGAQLPLDPTLKVMPGVLEGSNVQPVEAMVNMITNARRFEMQMKVIRSV 237 Query: 231 EKSMLEAIRNI 241 + + +A + Sbjct: 238 DDNEQKA-NQL 247 >gi|294501850|ref|YP_003565550.1| flagellar hook-basal body complex protein FlhP [Bacillus megaterium QM B1551] gi|294351787|gb|ADE72116.1| flagellar hook-basal body complex protein FlhP [Bacillus megaterium QM B1551] Length = 273 Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats. Identities = 47/274 (17%), Positives = 95/274 (34%), Gaps = 32/274 (11%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + L+Q+L + N+SNT+T G++ F++++ N+ + Sbjct: 1 MNRTMITAANTMGQLQQQLDVIGHNLSNTNTPGYKARDASFNDMLYQQVNNQEDKGTEKR 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL----ESPRGIILTRD 103 ++ + + L+ G+F +T LD A + +S + + TRD Sbjct: 61 LTPAGIRQGTGAYLDQTSLNMTQGAFQNTDKLLDVAASNPNVYFQVAVNDSQQPVQYTRD 120 Query: 104 GRFKVTDDG---SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGE---ISQKGKVIAT 157 G F ++ +G + VL I + + G + G T Sbjct: 121 GSFHLSPEGPNDVKLVNGSGQDVLGENGQAIIFNNAFKDIQIDGSGTITVTTNTGVDQFT 180 Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPLEDL--------SGVTVKRGFLEDSNANSMYE 209 +GL +V Q + + + V++G LE SN + E Sbjct: 181 LGLTNVQKPQVLEAKGENLFAFPAGMNQPNMFTDLTGKARETAGVEQGKLEQSNVDLSKE 240 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 + M + + + I ++ M + I + Sbjct: 241 LTDMSIAQRAYQFNSRSISIADQMMG-LVNGIRA 273 >gi|251779966|ref|ZP_04822886.1| flagellar hook-basal body complex protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243084281|gb|EES50171.1| flagellar hook-basal body complex protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 257 Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats. Identities = 52/259 (20%), Positives = 105/259 (40%), Gaps = 20/259 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVV----------GA 47 M F ++ + LE TV +N+ N + G++ + F +V+ Sbjct: 1 MIRGFYTAVSGLITLENEQQTVTNNIVNVNNNGYKKNTLTKQSFEDVLITNRQNKVGDRH 60 Query: 48 IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107 I N + V G+F +T + DF ++G +FA++ + TR G FK Sbjct: 61 IPNKLGNLNFGVKVNDVSTIYTQGAFKATDSYTDFGIDGRGFFAVQRGNERLFTRSGDFK 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGE---ISQKGKVIATMGLYSVD 164 + G L++ +G+Y + + + P G S G+ T+ + Sbjct: 121 IDQQGYLITGNGEYVLGRNNATGAEEPIYVGKDEFSLDGNNKLQSATGESTYTLLTADFE 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224 + + ++ S N P + V V++G LE SN N E+ +++ + ++F + Sbjct: 181 DYKSLEKLGDNYYSANNP----IYNAVVNVRQGVLETSNVNPTEELVKLMEIKRQFETNQ 236 Query: 225 TLIDENEKSMLEAIRNIAS 243 + ++++ +A I S Sbjct: 237 KFVSMQDETVQKAANEIGS 255 >gi|148256791|ref|YP_001241376.1| flagellar basal body rod protein FlgF [Bradyrhizobium sp. BTAi1] gi|146408964|gb|ABQ37470.1| putative flagellar basal-body rod protein (flgF or flgG) [Bradyrhizobium sp. BTAi1] Length = 254 Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats. Identities = 59/251 (23%), Positives = 114/251 (45%), Gaps = 10/251 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN-----DIDQK 55 M+ + IGL+ Q+ LE++L VA+N++N +T GF+ + F E + + + +K Sbjct: 1 MENALLIGLSRQMVLERQLDVVANNVANVNTNGFKADQQLFEEYLSSKAHEDNFPGASRK 60 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115 +S+V Y GS TG LD A+ G+ + +++ G TRDG + + G LV Sbjct: 61 VSYVQDRGTYRDFSQGSAQHTGNALDVAISGNGFLTVQTAAGERYTRDGNLHMNNLGQLV 120 Query: 116 SASGKYPVLDMA----SVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171 +A+G + V +++ + + L S Q + Sbjct: 121 TAAGDLVLGTGGPIVLQPTDHDINISPDGTVTVVEGVNRTDSIRGKLKLVSFADPQQAQK 180 Query: 172 RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 + N+ S TP + + TV++G++E SN +++ EM +M+ + + + + ++ Sbjct: 181 QGNNLYSAAGGVTP-QPDTKSTVQQGYIEKSNVSAVGEMSRMVEVMRSYTQVANMLQVQS 239 Query: 232 KSMLEAIRNIA 242 AI +A Sbjct: 240 DMRKNAIEKLA 250 >gi|118588710|ref|ZP_01546118.1| Flagellar basal body rod protein [Stappia aggregata IAM 12614] gi|118438696|gb|EAV45329.1| Flagellar basal body rod protein [Stappia aggregata IAM 12614] Length = 226 Score = 121 bits (303), Expect = 9e-26, Method: Composition-based stats. Identities = 52/228 (22%), Positives = 101/228 (44%), Gaps = 12/228 (5%) Query: 21 TVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-----DQKISFVASGKEYLSKEVGSFIS 75 +A+NM+N +T GF++ + F+E V + + D+ IS+V G Sbjct: 1 MIANNMANINTSGFKSQNLHFAEYVMPVADGSAFEPQDRAISYVDMFTTRTDFTHGPIKM 60 Query: 76 TGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIP 134 TG E D +L D +FA++ P TR G F++ G L+SA G + D PI Sbjct: 61 TGNEFDLSLNSDGFFAVQMPDGTEAYTRSGAFRLDSTGQLISADGSPVMTD--QGPISFN 118 Query: 135 QKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTV 194 +D + + G IS + + + + + + + N+ V + Sbjct: 119 AEDGRVEIAQDGTISTRLGIRGRIKVVDFEDPRTLEKIGNTMF----KGEDPIPAQEVRM 174 Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 +G +E SN + E+ ++I +T+ ++S ++ + ++ +AI + Sbjct: 175 VQGAVEGSNVYGITEVTRLIEVTRAYDSTAKIVKDLDELRQQAISTLG 222 >gi|209886824|ref|YP_002290681.1| flagellar basal body rod protein [Oligotropha carboxidovorans OM5] gi|209875020|gb|ACI94816.1| flagellar basal body rod protein [Oligotropha carboxidovorans OM5] Length = 243 Score = 121 bits (303), Expect = 9e-26, Method: Composition-based stats. Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 6/224 (2%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV--GAIKNDIDQKISFVASGKE 64 IGLAA +AL + + +VA+N++N T F+ +V+F E + + + S Sbjct: 7 IGLAALIALRRHVDSVANNVANLTTPAFKAGRVQFKEYLTEAEEADSPAMAKRSLVSTSH 66 Query: 65 YLSKEVGSFISTGTELDFALEGDA-WFALESPRGIILTRDGRFKVTDDGSLVSASGKYPV 123 + VG +TG LD AL D +F +++P G TR G F + DG L + GK + Sbjct: 67 FTDFSVGGMRTTGNPLDVALTDDDAFFVVDTPGGPRYTRSGAFTLNADGKLATIDGKPVL 126 Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183 + + + +D + G IS + IA + L + V+ E G+ Sbjct: 127 --TSIGHLVVQPRDGPVTIAGDGSISTRQGRIAGLRLVRFADRRE-VKPEGGGLFSAAHS 183 Query: 184 TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 + G LE SN EM ++I + + ++T ++ Sbjct: 184 PLEVPSGAGRLAIGVLETSNVREADEMSRLIAASNAYETLTKVV 227 >gi|302387773|ref|YP_003823595.1| fagellar hook-basal body protein [Clostridium saccharolyticum WM1] gi|302198401|gb|ADL05972.1| fagellar hook-basal body protein [Clostridium saccharolyticum WM1] Length = 267 Score = 121 bits (303), Expect = 9e-26, Method: Composition-based stats. Identities = 52/265 (19%), Positives = 96/265 (36%), Gaps = 23/265 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIK---VKF-SEVVGAIKN------ 50 M F + L + L+ +++NM N T G+++ K F E++ N Sbjct: 1 MFHGFYNLASGMLYQNRNLNVISNNMVNVSTPGYKSDKLVSTTFKEEMLYRNGNRNKSNP 60 Query: 51 -DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKV 108 +I A+ S + G+ TG LDFAL +F +E G TR+G F++ Sbjct: 61 VEIGTVSMIRAARNTNTSYDQGTLEETGGNLDFALTKPGFFTIEDTNGNRLYTRNGSFRL 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 D+G L +S + + + + G E+ KG G S D Sbjct: 121 DDEGYLCLSSMGRVLGEDGNPIELPSDHITVDKSGNIYEVPLKGLGTDEDGGDSEDTEPT 180 Query: 169 FVRRENSGISPN-----------IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217 + + + T + ++ +E SN + + EM M+ Sbjct: 181 LLGKIGVADFADYTQLVKGDNGTFTTTAEATAANGGIQWKTIERSNIDPIEEMTSMMSSQ 240 Query: 218 QKFNSITTLIDENEKSMLEAIRNIA 242 + S ++ ++ M + +I Sbjct: 241 RASQSAAQVLKMYDQLMSRIVSDIG 265 >gi|167567751|ref|ZP_02360667.1| flagellar basal-body rod protein FlgF [Burkholderia oklahomensis EO147] gi|167574702|ref|ZP_02367576.1| flagellar basal-body rod protein FlgF [Burkholderia oklahomensis C6786] Length = 242 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 50/242 (20%), Positives = 80/242 (33%), Gaps = 4/242 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M ++ L A+N++N T GFR + + Sbjct: 1 MDALIYTVMSGAGRALHALEVHANNIANAQTDGFRAELEAART--RPVAGYGYDSRHLIE 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119 LS + G T ELD A++G +F ++ P G TR G F++ DG+L Sbjct: 59 LQANVLSADAGVVEETDRELDAAIQGRGYFTVQGPNGGNAYTRAGNFQIDADGALTVNGR 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 V + ++ +V A L VD + + +G+ Sbjct: 119 PVIGEGGPVVLPDFTSVRIGEDGTLSITVAGDTEVQAVDRLELVDADASELVKNETGLLV 178 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 PL V V G LE SN + + EM + L + F L + A Sbjct: 179 PRNGAPLPASDDVRVLGGHLERSNVSPVDEMTSTMALNRAFEVQMRLYNAAGDMAD-AGN 237 Query: 240 NI 241 + Sbjct: 238 RL 239 >gi|269138583|ref|YP_003295283.1| flagellar basal-body rod protein [Edwardsiella tarda EIB202] gi|267984243|gb|ACY84072.1| flagellar basal-body rod protein [Edwardsiella tarda EIB202] gi|304558593|gb|ADM41257.1| Flagellar basal-body rod protein FlgF [Edwardsiella tarda FL6-60] Length = 251 Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 50/251 (19%), Positives = 85/251 (33%), Gaps = 14/251 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A+NM+N+ T GFR V + + + + V Sbjct: 1 MDHAIYTAMGAASQTLNQQAIAANNMANSTTPGFRAQLAALRAV--PVDGESVETRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + +G T LD AL+ D W A++ P TR+G ++ G ++++ G Sbjct: 59 ASTPMHDLSMGKLDYTERPLDVALQQDGWLAVQMPDGAEAYTRNGNLQINPQG-MLTSQG 117 Query: 120 KYPVLDMAS---VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + D + G Q L V S V + G Sbjct: 118 HLVMGDNGPIAIPDRAQLTIAADGTITALGAGDQPNATTQIGRLKLVKASAQEVVHGDDG 177 Query: 177 ISPNIP------PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + P L V V G LE SN + M MI ++F +I Sbjct: 178 MFHLTPEAEQKRGAQLPLDPTVKVMPGVLEGSNVQPVEAMVNMITNARRFEMQMKVIRSV 237 Query: 231 EKSMLEAIRNI 241 + + +A + Sbjct: 238 DDNEQKA-NQL 247 >gi|12057219|gb|AAF14371.2|AF133240_5 flagellar proximal rod protein FlgF [Rhodobacter sphaeroides] Length = 251 Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 48/249 (19%), Positives = 86/249 (34%), Gaps = 8/249 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTV-ADNMSNTDTVGFRTIKVKFSEV-VGAIKNDIDQKISF 58 M + L + A + + A N++N GFR + + + Sbjct: 1 MDRLIHTALNSL-ANLRDTRVIQAQNLANQTVPGFRRDLTNEGDARFLKAMDAASARAFQ 59 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSA 117 G S G TG +D A+ + WF ++ G L+R G ++T DG L++ Sbjct: 60 TERGPHLFSSAPGLLNQTGEPMDVAIAEEGWFFVQPEGGEPALSRRGDLRLTADGRLLNG 119 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM---GLYSVDMSQGF-VRRE 173 +G+ + P + I + + + L + + G VR++ Sbjct: 120 AGEAMLDPAMQPIELPPVRALIVDETGRILYEPQDGPPGQQVEGPLIATTIPDGVTVRKD 179 Query: 174 NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 G V +G LE SN N+M E+ I L + F +I ++ Sbjct: 180 PDGRIRAGGEPLPTPDQRARVLQGVLEGSNVNTMEELVSSIELQRTFELNLRMISSAKEL 239 Query: 234 MLEAIRNIA 242 R + Sbjct: 240 DESGARLLR 248 >gi|302343296|ref|YP_003807825.1| fagellar hook-basal body protein [Desulfarculus baarsii DSM 2075] gi|301639909|gb|ADK85231.1| fagellar hook-basal body protein [Desulfarculus baarsii DSM 2075] Length = 239 Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 42/248 (16%), Positives = 86/248 (34%), Gaps = 18/248 (7%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 G++ A +RL+ A+N++N T G+ +V+ +++ G + Sbjct: 3 IDGIAAGISGMNAAVRRLNQSANNLANISTPGYVPSRVEQADLAG-----------GGVA 51 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGK 120 + G +STG LD A++G +F L+ + TR G F + DG LV +G+ Sbjct: 52 VVGQTALASGPIVSTGNALDLAIDGAGYFVLQDADGNELYTRAGNFSLNADGQLVDQTGR 111 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI-ATMGLYSVDMSQGFVRRENSGISP 179 + P Q + + + + + + + G + Sbjct: 112 LVQAEGFQAPQGTAQIQVGADGVVQALGADDAVLAEGQLQIATFANPGGLRAVGGNAFQA 171 Query: 180 NIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 P + G L+ S + + EM I + F + I ++ + Sbjct: 172 TDASGPAVIDAAGQPGYGAIASGALQTSGTDIVSEMVGQITAQRSFEANLKTIRTGDEML 231 Query: 235 LEAIRNIA 242 + + Sbjct: 232 GTILDIVG 239 >gi|187478186|ref|YP_786210.1| flagellar basal body rod protein FlgF [Bordetella avium 197N] gi|115422772|emb|CAJ49300.1| flagellar basal-body rod protein [Bordetella avium 197N] Length = 255 Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 56/254 (22%), Positives = 99/254 (38%), Gaps = 12/254 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + S +++N++N T GFR + V + +++ A Sbjct: 1 MDRVIYTAMNGAARTAEHQSVLSNNLANVSTPGFREQLAMYRSVPVNDGTSLPTRVATAA 60 Query: 61 SGKEYLSKEVGSFISTGTELDFAL-EGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119 + + +G STG ELD AL G WFA+++P+G TR G +V +G L +A+G Sbjct: 61 T-TPGSNFAMGVMQSTGRELDVALSSGQGWFAIQTPQGEAYTRAGSLQVGVNGLLQTAAG 119 Query: 120 KYPVLDMAS----VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 + + D + G V+ L V+ Q + R + Sbjct: 120 QPVLSDQNVLIDIPDQAALTIASDGTITALGAGDPPNNVLNMGRLKMVNAPQSQLLRGDD 179 Query: 176 GISPN------IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 G+ P PL G + G +E SN ++ M MI ++F ++ E Sbjct: 180 GLFRMPAQANGQPAAPLPADPGQRLIAGVVEGSNVSASGAMVAMIENARRFEMQMQVVSE 239 Query: 230 NEKSMLEAIRNIAS 243 ++ A ++S Sbjct: 240 ANRNAERANSLLSS 253 >gi|146277707|ref|YP_001167866.1| hypothetical protein Rsph17025_1668 [Rhodobacter sphaeroides ATCC 17025] gi|145555948|gb|ABP70561.1| protein of unknown function DUF1078 domain protein [Rhodobacter sphaeroides ATCC 17025] Length = 251 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 46/249 (18%), Positives = 88/249 (35%), Gaps = 8/249 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTV-ADNMSNTDTVGFRTIKVKFSE-VVGAIKNDIDQKISF 58 M + L + A + + A N++N GFR + + Sbjct: 1 MDRLIHTALNSL-ANLRDTRVIQAQNLANQTVPGFRRDLTNEGDPRFLKAMETASARAFQ 59 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSA 117 G S G TG +D A+ + WF ++ G L+R G ++T +G LV+ Sbjct: 60 TERGPHLFSSAPGLLNQTGEPMDVAIAEEGWFFVQPEGGEPALSRRGDLRLTAEGQLVNG 119 Query: 118 SG----KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRE 173 +G + + ++ DE+ + + G+ + + +V +R++ Sbjct: 120 AGEAMLDQAMQPIELPAVRSLVIDEVGRILYEPMDGAPGEEVEGPVIATVIPEGVALRKD 179 Query: 174 NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 G + +G LE SN N+M E+ I L + F +I ++ Sbjct: 180 ADGQIRAGDEPLPAPDQRARILQGVLEGSNVNTMEELVSSIELQRTFELNLRMISAAKEL 239 Query: 234 MLEAIRNIA 242 R + Sbjct: 240 DESGARLLR 248 >gi|146305251|ref|YP_001185716.1| flagellar basal-body rod protein FlgF [Pseudomonas mendocina ymp] gi|145573452|gb|ABP82984.1| flagellar basal-body rod protein FlgF [Pseudomonas mendocina ymp] Length = 243 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 51/243 (20%), Positives = 101/243 (41%), Gaps = 6/243 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + A L+ A+N++N +T GFR + V A++ Sbjct: 1 MDRLGYTAMTAASRTMSSLTVRANNLANVNTPGFRADLEQAQAV--AVEGYGYDSRHLAQ 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASG 119 +S G+ ++TG +LD A++G FA+E TR+G +V D ++ +G Sbjct: 59 VKNNGVSLAPGALMATGRDLDVAIQGQGLFAVEGDDGAERYTRNGALQVDAD-LRLTLNG 117 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS-VDMSQGFVRRENSGIS 178 + + + + + I G I + + A + VD++ G + ++ SG+ Sbjct: 118 RAVLGEGGPIVLPEYDSLHIGRDGTVSVIPRGDFLTAEVDRIRVVDVAAGDLIKDASGLL 177 Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 P ED+ + G+LE SN ++ ++ + L + F + ++ E + EA Sbjct: 178 ARSDGQPAEDMEAPVLVSGYLEASNVGAIDQLVATMSLNRLFETQVKMMKAAED-LSEAG 236 Query: 239 RNI 241 + Sbjct: 237 NRM 239 >gi|317133467|ref|YP_004092781.1| flagellar hook-basal body protein [Ethanoligenens harbinense YUAN-3] gi|315471446|gb|ADU28050.1| flagellar hook-basal body protein [Ethanoligenens harbinense YUAN-3] Length = 239 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 39/250 (15%), Positives = 85/250 (34%), Gaps = 20/250 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE------VVGAIKNDIDQ 54 M + +A R++ + +N+ N D+ GF++ + + Sbjct: 1 MIRGIFSAASGMIAQSDRINVMGNNLDNADSQGFKSDTATLRSFDEELALRTTDAVPVGT 60 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGS 113 + V G TG+ + A+ G +FA+ +P + TR+G F G Sbjct: 61 LNAGVHVSGVETDLSQGELQQTGSSYNIAVNGGGFFAVAAPGGQTLYTREGDFAPDASGY 120 Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRE 173 L SG+ + + + + T G + Sbjct: 121 LALPSGQRLLDSTGAPISAAGFRLAANGAYTNDAGQTGTVPLYT----------GTAAKR 170 Query: 174 NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 G T + +G + +G++E SN N++ +M ++ ++ F S + + Sbjct: 171 TDGFF---DLTGAQGATGSVLLQGYVEKSNVNTVTDMTGLMEASRAFQSCQQAYNTGTDT 227 Query: 234 MLEAIRNIAS 243 + + + + S Sbjct: 228 LDKLVTQVGS 237 >gi|218689030|ref|YP_002397242.1| flagellar basal body rod protein FlgF [Escherichia coli ED1a] gi|218426594|emb|CAR07422.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli ED1a] Length = 251 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 84/252 (33%), Gaps = 16/252 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A+N++N T GFR V ++ + V Sbjct: 1 MDHAIYTAMGAASQTLNQQAVTANNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G T LD AL+ D W A+++ TR+G +V G L Sbjct: 59 ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 +PV+ A + G T+ V + V+R + Sbjct: 117 GHPVVGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176 Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 GI L+ + V G LE SN N++ M MI ++F +I Sbjct: 177 GIFRLSAESQARRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236 Query: 230 NEKSMLEAIRNI 241 + + A + Sbjct: 237 VDDNAGRA-NQL 247 >gi|261344141|ref|ZP_05971785.1| flagellar basal-body rod protein FlgF [Providencia rustigianii DSM 4541] gi|282567733|gb|EFB73268.1| flagellar basal-body rod protein FlgF [Providencia rustigianii DSM 4541] Length = 251 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 47/252 (18%), Positives = 81/252 (32%), Gaps = 16/252 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + V++N++N T GF+ V I D +Q + V Sbjct: 1 MDHVIYTAMGGARHALENQGIVSNNIANVSTAGFKAQLSAMRAV--PIHGDSEQTRTMVV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASG 119 + G TG D AL + A+ + TR+G +V+ DG L+ G Sbjct: 59 ASTPGADMSQGPLNYTGKATDVALNDKHFLAVALADGSEAYTRNGNIQVSPDGELM--IG 116 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEI---SQKGKVIATMGLYSV--DMSQGFVRREN 174 + P D + ++ +G V +R E+ Sbjct: 117 GNLLQGDGGPIDVPPNADLTIGADGTITALLATDPPTMLGQIGRLKVVEAQPNELIRGED 176 Query: 175 -----SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 S + L+ V G +E SN N+ M MI + F +I Sbjct: 177 GLFHLSAQAQAANGNGLQQSGRAIVTSGVIEGSNVNAAEAMVSMIANARHFEMQMKVIHS 236 Query: 230 NEKSMLEAIRNI 241 +++ A + Sbjct: 237 ADENAQRA-NQL 247 >gi|330501138|ref|YP_004378007.1| flagellar basal-body rod protein FlgF [Pseudomonas mendocina NK-01] gi|328915424|gb|AEB56255.1| flagellar basal-body rod protein FlgF [Pseudomonas mendocina NK-01] Length = 243 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 49/243 (20%), Positives = 98/243 (40%), Gaps = 6/243 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + A L+ A+N++N +T GFR + V A++ Sbjct: 1 MDRLGYTAMTAASRTMSSLTVRANNLANVNTPGFRADLEQAQAV--AVEGYGYDSRHLAR 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASG 119 ++ G ++TG +LD A++G FA+E TR+G +V + ++ +G Sbjct: 59 VKNNGVNLAPGELMATGRDLDVAIQGRGLFAVEGDDGAERYTRNGALQVDAE-LRLTLNG 117 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV-DMSQGFVRRENSGIS 178 + + + + + I G I + V A + V D+ + ++ SG+ Sbjct: 118 RAVLGEGGPIVLPEYDSLHIGRDGTVSVIPRGDFVTAEVDRIRVVDVDAADLTKDASGLL 177 Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 I P E L + G+LE SN ++ ++ + L + F + ++ E + +A Sbjct: 178 TRIDGQPAEGLDAPVLASGYLEASNVGAIDQLVATMSLNRLFETQVKMMKAAED-LSDAG 236 Query: 239 RNI 241 + Sbjct: 237 NRM 239 >gi|83717394|ref|YP_438390.1| flagellar basal-body rod protein FlgF [Burkholderia thailandensis E264] gi|167614838|ref|ZP_02383473.1| flagellar basal-body rod protein FlgF [Burkholderia thailandensis Bt4] gi|257141423|ref|ZP_05589685.1| flagellar basal-body rod protein FlgF [Burkholderia thailandensis E264] gi|83651219|gb|ABC35283.1| flagellar basal-body rod protein FlgF [Burkholderia thailandensis E264] Length = 241 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 49/236 (20%), Positives = 82/236 (34%), Gaps = 2/236 (0%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M ++ ++ A+NM+N T GFR A++ ++ Sbjct: 1 MDALIYTVMSGADRTLHGIAVHANNMANAQTDGFRAELEMAES--QAVRGYGYDSRHLLS 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 L+ E G TG ELD A+ G +F +++ G TR G F++ DG+L Sbjct: 59 PRANALNGEAGVVADTGRELDAAINGSGYFTVDTQGGEAYTRAGNFEIDADGALTVNGRP 118 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 V + + +V A L VD + + +G+ Sbjct: 119 VIGEGGPIVLPEFTSLRIGEDGTISITSPGDTEVQAVERLALVDAPASALVKNEAGLLVA 178 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 PL V V G LE SN + + EM + L + F + + + Sbjct: 179 RDGQPLPASDEVKVLGGHLERSNVSPVEEMIATMSLNRAFEVQMRMFNAAGEMADT 234 >gi|330447904|ref|ZP_08311552.1| flagellar basal-body rod protein FlgF [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328492095|dbj|GAA06049.1| flagellar basal-body rod protein FlgF [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 243 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 44/242 (18%), Positives = 90/242 (37%), Gaps = 4/242 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + + ++N+SN DT GFR + + ++ + V Sbjct: 1 MDSFLYTATSGASRVMKAQHVRSNNLSNADTAGFRADMERVQSI--PLQGAGFDGRTMVV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + G I TG LD A+ GD +F +++ TR G +V ++G + Sbjct: 59 TNSAATRFDAGDVIKTGRALDIAINGDGFFTVQTIVGNEAYTRAGNIRVDEEGMMRVNGF 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 A V + + G + L VD +++ + G+ Sbjct: 119 PLMSEGEALVLPEHQNVEISDKGVVTVVPPGGGAKLEVGQLKLVDPEFTQLQKHSDGLFH 178 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 I V + G LE SN +++ E+ ++ LT+ F ++ +++ +A Sbjct: 179 PINDQVFAQDPTVAITAGHLEGSNVSAINELVSVMSLTRNFEMQVRMMKTA-ETLAQAGT 237 Query: 240 NI 241 + Sbjct: 238 RL 239 >gi|254460299|ref|ZP_05073715.1| flagellar proximal rod protein FlgF [Rhodobacterales bacterium HTCC2083] gi|206676888|gb|EDZ41375.1| flagellar proximal rod protein FlgF [Rhodobacteraceae bacterium HTCC2083] Length = 253 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 42/241 (17%), Positives = 87/241 (36%), Gaps = 8/241 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG-AIKNDIDQKISFV 59 M + +I L + + L+ + NM+N + G+R V E ++ ++ Sbjct: 1 MDRNIHIALNSMRNISSDLTVNSQNMANVNVPGYRADLVVTREAQALQSFDEFRSRVFSR 60 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRFKVTDDGSLVSA 117 S E G+ +TG +D A+ G+ +F + L+R G F + ++ Sbjct: 61 QGKGTLFSAEQGAMQNTGEPMDAAIRGEGYFMIAPATGGDPALSRRGDFGFDLERFIIDG 120 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV-----DMSQGFVRR 172 +G + + + + + ++ G T + + Sbjct: 121 AGSRLLDTDMNPIQLPEARRIVVEETGQIQVELFGAPEGTFVPGPIIATTSAADVKLSKS 180 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 +S I P+ E + +GFLE SN N++ + + I +KF I ++ Sbjct: 181 IDSHIRPSNGDPLPEPDQRARISQGFLESSNVNTITALVKNIESQRKFEMSVKFISLAQE 240 Query: 233 S 233 Sbjct: 241 I 241 >gi|332980933|ref|YP_004462374.1| flagellar hook-basal body protein [Mahella australiensis 50-1 BON] gi|332698611|gb|AEE95552.1| flagellar hook-basal body protein [Mahella australiensis 50-1 BON] Length = 262 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 46/260 (17%), Positives = 92/260 (35%), Gaps = 18/260 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKND------ 51 M A RL+ +A+N++N +T G++ K+ F +V+ A + Sbjct: 1 MLRGLYNATTAMQVETARLNAIANNIANAETTGYKKDKMVSQSFPDVLVARIGNKAGAVI 60 Query: 52 -----IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGR 105 I V + G T D AL G+ +F L + TRDG Sbjct: 61 RPFDIIGSINHGVHVDQVKTDWFQGPLQQTDNTTDLALTGNGFFVLRVGQNDYRYTRDGA 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPI--QIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 F V DG LV+ +G + + + + + T+ + Sbjct: 121 FAVDADGYLVNQNGYRVQGYDNQNEFVDILVGNERFSVDPAGNIYTDQRQYAGTIAVEDF 180 Query: 164 DM-SQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222 D + ++ P G +K+G +E SN + E+ M+ + + + S Sbjct: 181 DNRDDALEKAGDNLYVVYDPEQYQSHPVGTGIKQGHIEVSNVDINKEITDMMEVYRHYES 240 Query: 223 ITTLIDENEKSMLEAIRNIA 242 ++ ++++ + + + Sbjct: 241 AQRIVSMLDQTLDKTVNEVG 260 >gi|238755323|ref|ZP_04616666.1| Flagellar basal-body rod protein flgF [Yersinia ruckeri ATCC 29473] gi|238706459|gb|EEP98833.1| Flagellar basal-body rod protein flgF [Yersinia ruckeri ATCC 29473] Length = 251 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 84/251 (33%), Gaps = 11/251 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A ++ + A+N++N T GFR V I + V Sbjct: 1 MDHAIYTAMGAARQTLEQQAVTANNLANASTPGFRAQLSALRAV--PIDGPSMATRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSA-- 117 + G +G LD AL+ D + A++ P TR+G +V +G + Sbjct: 59 ASTPGADMSQGPMNFSGRPLDVALQQDGFMAVQLPDGTEAYTRNGNIQVAANGQMTVQGY 118 Query: 118 --SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 G +D+ D + G+ I + L ++ + Sbjct: 119 PLMGDNGPIDVPPQAEVTIAADGTISALNAGDPPNTIAQIGRLKLVQAQGNELNRGDDGL 178 Query: 176 GISPNIP----PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 L + V V G LE SN + M MI ++F +I + Sbjct: 179 FHLTPAALQQRGATLPNDPLVKVMPGVLEGSNVKPVETMVDMIANARRFEMQMKVIHSVD 238 Query: 232 KSMLEAIRNIA 242 ++ A + +A Sbjct: 239 ENEQRANQLLA 249 >gi|226225712|ref|YP_002759818.1| flagellar basal-body rod protein FlgF [Gemmatimonas aurantiaca T-27] gi|226088903|dbj|BAH37348.1| flagellar basal-body rod protein FlgF [Gemmatimonas aurantiaca T-27] Length = 234 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 53/241 (21%), Positives = 94/241 (39%), Gaps = 16/241 (6%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + +A LE++ +A+N++N T GF+ F+ ++G D I Sbjct: 7 NNGLSSAASALQMLERKQQVLANNLANASTRGFKAE-TTFARMMGNQLAKADTAIDLT-- 63 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 G+ T LD ALEGD +F +++P G R+G F++ + L G Sbjct: 64 --------PGTLTETHNSLDLALEGDGFFVVDTPAGERFVRNGNFRLDANRHLTDEQGNP 115 Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 + I V G I+ GK + + V + P+ Sbjct: 116 VL----GENGAISLPQGTIEVDATGLITVNGKPQQRLRVERVASGTDLEHEGGTRFIPDA 171 Query: 182 PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 + TVK+GFLE+SN N M M +M+ + ++ + + + A+ ++ Sbjct: 172 SRQVIPPTER-TVKQGFLEESNVNPMSAMTEMLTVLHRYGAAQQTLSTIDAVRGIAVTDL 230 Query: 242 A 242 A Sbjct: 231 A 231 >gi|330809229|ref|YP_004353691.1| flagellar basal-body rod protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327377337|gb|AEA68687.1| Flagellar basal-body rod protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 236 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 56/225 (24%), Positives = 104/225 (46%), Gaps = 8/225 (3%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTG 77 L V+ N++N +TVG++ + F+ + + + ++S + G+ TG Sbjct: 18 NLKAVSQNVANANTVGYKAERT-FNVMASNVAGPGVAGGLDDIQAQTWISTDGGALQHTG 76 Query: 78 TELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKD 137 D AL GDAWFA+++P G++L+RDGRF+V G LVS +G + D + D Sbjct: 77 RATDLALSGDAWFAIKTPGGVLLSRDGRFQVDKSGYLVSRAGYPVLADD----GPLQVAD 132 Query: 138 EIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRG 197 + + GE+S + + + + VD Q + + + + TP V +G Sbjct: 133 GVLKIDASGEVSVDDRPVGRLSIVRVDNPQQLLAVGDGLYAASTGITP---AKSFVVHQG 189 Query: 198 FLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 LE SNA +M +M+ +++ ++ + + + I I Sbjct: 190 LLERSNAAMGTDMVKMMEVSRHVETMQRALSAYDGMLNSGINQIG 234 >gi|157694040|ref|YP_001488502.1| flagellar basal-body rod protein [Bacillus pumilus SAFR-032] gi|157682798|gb|ABV63942.1| flagellar basal-body rod protein [Bacillus pumilus SAFR-032] Length = 279 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 42/280 (15%), Positives = 92/280 (32%), Gaps = 42/280 (15%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTI---KVKFSEVVG----------- 46 M +A +A E+R +++N++N +T G++ F E++ Sbjct: 1 MLKGLYTATSAMIAQERRTEMLSNNIANANTPGYKADEGTMRAFPEMLLSRMESGRFQTS 60 Query: 47 -------AIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA----------- 88 + I + + G+ +T D AL + Sbjct: 61 SGKGFSVPQQTPIGGINTGTYMQELIPQFTQGTLKTTDQTTDVALVENNVPINPETNQKS 120 Query: 89 --WFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG 146 ++A+ +P G+ T+ + L + I + E F V G Sbjct: 121 ALFYAVNTPEGVRYTKSSSITLNAQNQLTINGRALLSVTGE----PITVQSENFKVNADG 176 Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV----TVKRGFLEDS 202 +S+ G+ + + + ++ R N ++ T+ +G E S Sbjct: 177 TVSENGQNLGQIDVRVAMDTRNLAREGNDLYRTADNQPLPSAVNNGQMSYTLSQGVSELS 236 Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 N + +M + F + ++ +KS+ +A+ I Sbjct: 237 NVDVTKSYTEMTTAYRAFETNQKVVQAYDKSLEKAVNEIG 276 >gi|254437478|ref|ZP_05050972.1| hypothetical protein OA307_2348 [Octadecabacter antarcticus 307] gi|198252924|gb|EDY77238.1| hypothetical protein OA307_2348 [Octadecabacter antarcticus 307] Length = 253 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 49/241 (20%), Positives = 88/241 (36%), Gaps = 8/241 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV-VGAIKNDIDQKISFV 59 M + +I L + L + A NM+N + GFR E + ++ Sbjct: 1 MDRNIHIALNSMRNLSTEMRVNAQNMANLNVPGFRADLTVTREASFLTSLDQYQSRVYSQ 60 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRFKVTDDGSLVSA 117 S + S + GS STG+E+D A+ G+ +F +E L+R G D LV Sbjct: 61 QSQEALFSDDAGSLQSTGSEMDTAIRGNGYFFVEPALGGDAALSRRGDLGFDDGRFLVDG 120 Query: 118 SGKYPVLDM-----ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172 +G + +I ++ E + V + S+ ++ Sbjct: 121 AGNRLLDTELAPIQMPPTRRIVVEETGQIQMELMGTPEGTLVAGPIIATSMAEGISLIKS 180 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 + I P+ E + +GFLE SN N++ + + I + F I ++ Sbjct: 181 PDGHIRPSNNTELPEPDQRARIAQGFLESSNVNTISALIKNIESQRHFEMSVKFIALAKE 240 Query: 233 S 233 Sbjct: 241 I 241 >gi|224825778|ref|ZP_03698882.1| flagellar basal-body rod protein FlgF [Lutiella nitroferrum 2002] gi|224602002|gb|EEG08181.1| flagellar basal-body rod protein FlgF [Lutiella nitroferrum 2002] Length = 241 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 45/241 (18%), Positives = 85/241 (35%), Gaps = 3/241 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M ++ + A+N++N T GFR S A++ Sbjct: 1 MDALIYTIMSGADRTLKAQQVHANNLANAQTNGFRADIEVASS--QAVRGYGYDARHMTR 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + + G+ + TG +LD AL+GD + A+ G TR G F V +G+L Sbjct: 59 AEPNAVDHRAGTVVETGRDLDVALQGDGFLAVAVGSGEAYTRAGNFSVDANGALTVNGRP 118 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 V + + + + + L V + + ++ +G+ + Sbjct: 119 VLGDGGPIVLPPYVRVAVAGDGTISIQPPGETAMQVVDRLKLVKPAPEELSKDENGLIVS 178 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 L V V+ LE SN +++ EM + L + F + + + EA Sbjct: 179 RLGNTLPADETVRVQGEHLEQSNVSAVEEMIATMSLNRGFEMQMKMFNAANDMV-EAGNR 237 Query: 241 I 241 + Sbjct: 238 L 238 >gi|126445461|ref|YP_001061247.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei 668] gi|167725931|ref|ZP_02409167.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei DM98] gi|254182893|ref|ZP_04889486.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei 1655] gi|254299685|ref|ZP_04967134.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei 406e] gi|126224952|gb|ABN88457.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei 668] gi|157809369|gb|EDO86539.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei 406e] gi|184213427|gb|EDU10470.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei 1655] Length = 241 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 48/241 (19%), Positives = 83/241 (34%), Gaps = 3/241 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M ++ ++ A+NM+N T GFR ++ + Sbjct: 1 MDALIYTVMSGADRTLHGIAVHANNMANAQTDGFRAELEMAES--QPVRGYGYDSRHLLN 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 L+ E G + TG ELD A+ G +F +++ TR G F++ DG+L Sbjct: 59 PRANALNGEAGVVVDTGRELDAAINGGGYFTVDAQGSEAYTRAGNFEIDADGALTVNGRP 118 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 V + + +V A L VD + + +G+ Sbjct: 119 VIGEGGPIVLPEFTSLRIGEDGTISITSPGDTEVQAVERLALVDAPASALVKNEAGLLVA 178 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 PL + V V G LE SN + + EM + L + F + + + A Sbjct: 179 RDGQPLPASNEVKVLGGHLERSNVSPVEEMIATMSLNRAFEVQMRMFNAAGEMAD-AGNR 237 Query: 241 I 241 + Sbjct: 238 L 238 >gi|167576663|ref|ZP_02369537.1| flagellar basal-body rod protein FlgF [Burkholderia thailandensis TXDOH] Length = 241 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 49/236 (20%), Positives = 82/236 (34%), Gaps = 2/236 (0%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M ++ ++ A+NM+N T GFR A++ + Sbjct: 1 MDALIYTVMSGADRTLHGIAVHANNMANAQTDGFRAELEMAES--QAVRGYGYDSRHLLN 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 L+ E G TG ELD A+ G +F +++ G TR G F++ DG+L Sbjct: 59 PRANALNGEAGVVADTGRELDAAINGSGYFTVDTQGGEAYTRAGNFEIDADGALTVNGRP 118 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 V + + +V A L VD + + +G+ Sbjct: 119 VIGEGGPIVLPEFTSLRIGEDGTISITSPGDTEVQAVERLALVDAPASALVKNEAGLLVA 178 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 PL + V V G LE SN + + EM + L + F + + + Sbjct: 179 RDGQPLPVSNEVKVLGGHLERSNVSPVEEMIATMSLNRAFEVQMRMFNAAGEMADT 234 >gi|323492337|ref|ZP_08097490.1| flagellar basal body rod protein [Vibrio brasiliensis LMG 20546] gi|323313384|gb|EGA66495.1| flagellar basal body rod protein [Vibrio brasiliensis LMG 20546] Length = 243 Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats. Identities = 40/242 (16%), Positives = 86/242 (35%), Gaps = 4/242 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + Q ++N+SN DT GFR + S + ++ + V Sbjct: 1 MDSLLFTATSGASRVLQAQHVRSNNLSNADTAGFRADMERVSSI--PLQGSGFDGRTMVV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + G + TG LD A+ GD + +++ TR G KV G+L Sbjct: 59 TNSASTRFDEGDIVKTGRPLDVAVMGDGYLTVQTADGQEAYTRAGNIKVDPFGALSINGF 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 + + + G + L V + + + + Sbjct: 119 AVLGDGGPLILPDYQKVEISERGRISVVPPGGGAELEVGTLKLVKPETNQLEKHSDSLLH 178 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 ++ P V + +E SN +++ E+ ++ LT+ F ++ +++ +A Sbjct: 179 SVDGNPFVADETVQLAPEHIEGSNVSAIDELLNVMSLTRNFEMQVRMMKTA-ETLAQAGN 237 Query: 240 NI 241 + Sbjct: 238 KL 239 >gi|227873524|ref|ZP_03991769.1| flagellar basal-body rod protein [Oribacterium sinus F0268] gi|227840614|gb|EEJ50999.1| flagellar basal-body rod protein [Oribacterium sinus F0268] Length = 256 Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats. Identities = 52/256 (20%), Positives = 96/256 (37%), Gaps = 16/256 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKN------- 50 M F + + + L+ +++NM N T G++ + F E + Sbjct: 1 MYQGFYDLASGMITQRRNLNNISNNMVNIQTSGYKKDTMVSSTFKEEMMIRTGKYNKKGP 60 Query: 51 -DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109 D+ ++ K Y E GS+ T D A+ G +FA+ +P+G TR G F V Sbjct: 61 EDLAVASRIKSASKTYTDYEQGSYELTDGIYDTAISGKGFFAVSTPQGTRYTRGGAFSVN 120 Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK---VIATMGLYSVDMS 166 ++G L A + + I G + + G V T+ + Sbjct: 121 ENGVLELAGVGKVQSEEGHDIVLPNDNFAIDPDGSIFDPNSTGNTRTVYGTLKVVDFADY 180 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 + +N+ S N L+ + ++ LE SN N + EM M+ + S + Sbjct: 181 NALHKEDNNLFSTNQTE--LKKPADSSINWKMLEKSNVNMVDEMTTMMSSQRALQSAAQM 238 Query: 227 IDENEKSMLEAIRNIA 242 + + M +A ++ Sbjct: 239 LRMYDTVMAKASSDVG 254 >gi|253990126|ref|YP_003041482.1| flagellar basal-body rod protein flgf [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253781576|emb|CAQ84739.1| flagellar basal-body rod protein flgf (putative proximal rod protein) [Photorhabdus asymbiotica] Length = 251 Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats. Identities = 40/251 (15%), Positives = 78/251 (31%), Gaps = 14/251 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + A+N++N T GF+ V ++ + V Sbjct: 1 MDHVIYTAMGGARQTLEHQAVTANNLANASTPGFKAQLAALRAV--PVEGAAFNTRTLVV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G T LD A+ + A++ TR+G +++ DG ++ G Sbjct: 59 ASTPGSDNRQGPMNYTARPLDVAIGQGGYLAVQLEDGSEAYTRNGSIQISADG-QLTVQG 117 Query: 120 KYPV--LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS-- 175 + VP Q ++ +G + + Sbjct: 118 NLLMSENGPIDVPPQAELTLAADGSISALVAGDPPTLLGQLGKLKMVKPEDNQLVRGDDG 177 Query: 176 -----GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + + L V + G LE SN N M M MI ++F +I + Sbjct: 178 LFHMTEQARELQGDVLPASDEVKLMPGTLEGSNVNPMESMVSMIDNARRFEMQMKVIHSS 237 Query: 231 EKSMLEAIRNI 241 +++ A + Sbjct: 238 DENAQRA-NQL 247 >gi|163803170|ref|ZP_02197053.1| putative flagellar basal-body rod protein [Vibrio sp. AND4] gi|159173070|gb|EDP57903.1| putative flagellar basal-body rod protein [Vibrio sp. AND4] Length = 243 Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats. Identities = 43/244 (17%), Positives = 93/244 (38%), Gaps = 8/244 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + + ++N+SN DT GFR + V ++ + V Sbjct: 1 MDSLLFTATSGASRVLKAQHVRSNNLSNADTAGFRADMERVRSV--ELQGSGFDGRTMVV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + G + TG LD A+ G+ + ++E+P TR G KV G++ + Sbjct: 59 TNSAATRFDSGDIMKTGRPLDVAIMGEGYLSVETPTGNEAYTRAGNIKVDTFGAM--SIN 116 Query: 120 KYPVLDMASV--PIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177 +PVL + + G + L V +++E+ + Sbjct: 117 GFPVLGENGPLVVPDFQKIEISERGRVSVIPPGGGAEVEVGTLKMVKPPFDQLQKESDSL 176 Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 ++ P V + +E SN +++ E+ ++ LT+ F ++ +++ +A Sbjct: 177 LHSLDGAPFPADETVQLSPEHIEGSNVSAIDELLSVMSLTRNFEMQVRMMKTA-ETLAQA 235 Query: 238 IRNI 241 + Sbjct: 236 GNKL 239 >gi|168699694|ref|ZP_02731971.1| flagellar basal body rod protein [Gemmata obscuriglobus UQM 2246] Length = 238 Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats. Identities = 48/221 (21%), Positives = 86/221 (38%), Gaps = 7/221 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK--NDIDQKISFVAS 61 +A + ++ A N++++ T G+R + F + I + I+ + Sbjct: 1 GLYSAGSALVIASEQQEVTAHNLAHSTTPGYRERGLVFESLDRHIGHAEEPTGDITGART 60 Query: 62 GKEYLSKEVGSFISTGTELDFAL-EGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + Y G TG D A+ E D +F L P G + TR+G F+V G LVS +G Sbjct: 61 VQAYNDFRPGPIQQTGHPYDLAIGEADRFFVLNGPNGPLYTRNGCFRVDPQGRLVSQAGY 120 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 D +V IP+ + G I+ G+ + T+ L ++ + Sbjct: 121 ALQTDQGNVT--IPEGTSRVVIASDGSITADGQPLGTVRLARFADTKQLTAAGPTLY--T 176 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221 P + V +G E SN M ++I + ++ Sbjct: 177 ASPQAGRQDAPGRVIQGSREGSNVEPAAAMVRLIIGARYYD 217 >gi|300722681|ref|YP_003711971.1| flagellar basal-body rod cell-proximal protein [Xenorhabdus nematophila ATCC 19061] gi|297629188|emb|CBJ89784.1| flagellar biosynthesis; cell-proximal portion of basal-body rod [Xenorhabdus nematophila ATCC 19061] Length = 251 Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats. Identities = 41/251 (16%), Positives = 81/251 (32%), Gaps = 11/251 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + A + + A+N++N T GF+ V I+ + + Sbjct: 1 MDHVIYTAMGAARQTLEHQAVTANNLANASTSGFKAQLAALRAV--PIEGETLPTRTLTV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGS-LVSAS 118 + + G T LD A+ + A++ TR+G +++ +G +V Sbjct: 59 ASTPGMDSRQGPMNYTSRPLDVAVGQGGFLAVQLEDGTEAYTRNGSIQISPEGQLMVQGR 118 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS--- 175 VP Q S ++ +G + + Sbjct: 119 MLMGENGPIDVPPQAELTMAADGAISALIASDPPTLLGQIGKLKIVKPEASQVVRGDDGL 178 Query: 176 ----GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 + L + V + G LE SN N + M MI ++F +I ++ Sbjct: 179 FHLTPQAQEQVGNELAASTEVKIMPGVLEGSNVNPVESMVNMIANARRFEMQMKVIHSSD 238 Query: 232 KSMLEAIRNIA 242 ++ A + +A Sbjct: 239 ENAQRANQILA 249 >gi|291334315|gb|ADD93976.1| hypothetical protein Rsph17025_1668 [uncultured marine bacterium MedDCM-OCT-S09-C247] Length = 251 Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats. Identities = 46/239 (19%), Positives = 88/239 (36%), Gaps = 6/239 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV-KFSEVVGAIKNDIDQKISFV 59 M L+A ++ +A+N++N + GFR + + + + K+ + Sbjct: 1 MDRLAQTALSAIRQMQDNKFDLANNLANVNVPGFRKDLPNEGNAGFLKELDKVSAKVLPL 60 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSAS 118 S + S E GS +TG E D A+ + +F ++ + L+R G V LV+ Sbjct: 61 ESDRRLFSNESGSLQNTGLETDVAVLNEGFFYIQPENGQVALSRRGDLGVNAQNQLVNGV 120 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ----GFVRREN 174 G + D + + + Q G + S + + Sbjct: 121 GDLVLSDGLEPILLPNFTAMSITDIGEVLVQQPGLPDGELTSVGFIGSTTSQLEQLIKSL 180 Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 G I T + +G+LE SN N++ E+ + I + ++F LI + Sbjct: 181 DGNIRKIDGTVPDPDQTGKFGQGYLESSNVNAIEELIRNIDMQRQFEINVKLIKKASDL 239 >gi|167905091|ref|ZP_02492296.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei NCTC 13177] Length = 241 Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats. Identities = 48/241 (19%), Positives = 83/241 (34%), Gaps = 3/241 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M ++ ++ A+NM+N T GFR ++ + Sbjct: 1 MDALIYTIMSGADRTLHGIAVHANNMANAQTDGFRAELEMAES--QPVRGYGYDSRHLLN 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 L+ E G + TG ELD A+ G +F +++ TR G F++ DG+L Sbjct: 59 PRANALNGEAGVVVDTGRELDAAINGGGYFTVDAQGSEAYTRAGNFEIDADGALTVNGRP 118 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 V + + +V A L VD + + +G+ Sbjct: 119 VIGEGGPIVLPEFTSLRIGEDGTISITSPGDTEVQAVERLALVDAPASALVKNEAGLLVA 178 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 PL + V V G LE SN + + EM + L + F + + + A Sbjct: 179 RDGQPLPASNEVKVLGGHLERSNVSPVEEMIATMSLNRAFEVQMRMFNAAGEMAD-AGNR 237 Query: 241 I 241 + Sbjct: 238 L 238 >gi|221311596|ref|ZP_03593443.1| flagellar hook-basal body protein [Bacillus subtilis subsp. subtilis str. 168] gi|221315923|ref|ZP_03597728.1| flagellar hook-basal body protein [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320836|ref|ZP_03602130.1| flagellar hook-basal body protein [Bacillus subtilis subsp. subtilis str. JH642] gi|1763701|emb|CAB05941.1| flhP [Bacillus subtilis subsp. subtilis str. 168] Length = 268 Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats. Identities = 51/269 (18%), Positives = 97/269 (36%), Gaps = 28/269 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M S L+Q++ T++ N+SN++T G++ FSE+V + +D+K VA Sbjct: 1 MLRSMLTASTTLNQLQQQIDTISSNLSNSNTTGYKAKDTNFSELVRQQFDQVDEKNEEVA 60 Query: 61 SGKEYLS--------------KEVGSFISTGTELDFALEGDA-WFALESPRGIILTRDGR 105 ++ + GS T +LD A + + TRDG Sbjct: 61 KARKTPPLAPLVGAMMSSRLVSDQGSIQKTDRDLDIAFTSPYQYLQVNVNGNRQYTRDGA 120 Query: 106 FKV-----TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM-- 158 V + + YPVLD + I + + + G ++ Sbjct: 121 LYVTPSAANANQLQLVTGNGYPVLDENGNTVNIDSSMKNITINKNGTLTASDGNAVQRFN 180 Query: 159 -GLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT----VKRGFLEDSNANSMYEMGQM 213 G+ V+ Q N+ S + E +++G LE SN + +M + Sbjct: 181 LGVVQVNNPQELKSEGNNLFSIDNAAAFEELNGANRQNIGMQQGSLEMSNVDISEQMTDL 240 Query: 214 IHLTQKFNSITTLIDENEKSMLEAIRNIA 242 I + + + I ++ + I ++ Sbjct: 241 ITSQRSYQLNSRTITMGDQMLG-LINSVR 268 >gi|168783607|ref|ZP_02808614.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7 str. EC4076] gi|188999091|gb|EDU68077.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7 str. EC4076] Length = 251 Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 82/252 (32%), Gaps = 16/252 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V ++ + V Sbjct: 1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G T LD AL+ D W A+++ TR+G +V G L Sbjct: 59 ASTPGADITPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 +PV+ A + G T+ V + V+R + Sbjct: 117 GHPVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176 Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 GI L+ + V G LE SN N++ M MI ++F +I Sbjct: 177 GIFRLSAETQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMTDMIATARRFEMQMKVITT 236 Query: 230 NEKSMLEAIRNI 241 + A + Sbjct: 237 VNDNPGRA-NQL 247 >gi|77457728|ref|YP_347233.1| flagellar basal body rod protein FlgF [Pseudomonas fluorescens Pf0-1] gi|77381731|gb|ABA73244.1| flagellar basal-body rod protein [Pseudomonas fluorescens Pf0-1] Length = 246 Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats. Identities = 46/245 (18%), Positives = 94/245 (38%), Gaps = 6/245 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A+N++N T GF+ + + + D +F Sbjct: 1 MDKYLYVAMTGASQNALAQKAHANNLANISTNGFQRDLEQARSM--PVFGDSFPARAFAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119 S + GS + TG +LD A+ G+ + A+++P G R G + G L + +G Sbjct: 59 SERPATDFTPGSLVQTGRDLDVAVSGNGFIAVQNPNGGESYVRTGSLNIDALGVLRAGNG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQK--GKVIATMGLYSVDMSQ-GFVRRENSG 176 + + + + Q+ E+ G + +V+A + + + + G Sbjct: 119 MPVMGNGGPIAVPPEQQVEVGEDGTISIRAMGEGPRVMAEVDRIKLVNPDIKNMNKGLDG 178 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 P + V + GFLE SN N++ EM ++ L ++F +++ + Sbjct: 179 SIYTKDGQPAPADANVKLVSGFLESSNVNAVEEMTSVLALAKQFELHVKMMNTAKDDDQA 238 Query: 237 AIRNI 241 R + Sbjct: 239 MARVL 243 >gi|91224198|ref|ZP_01259461.1| putative flagellar basal-body rod protein [Vibrio alginolyticus 12G01] gi|269965645|ref|ZP_06179758.1| Flagellar basal-body rod protein flgF [Vibrio alginolyticus 40B] gi|91191109|gb|EAS77375.1| putative flagellar basal-body rod protein [Vibrio alginolyticus 12G01] gi|269829713|gb|EEZ83949.1| Flagellar basal-body rod protein flgF [Vibrio alginolyticus 40B] Length = 243 Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats. Identities = 46/243 (18%), Positives = 99/243 (40%), Gaps = 6/243 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + + ++N+SN DT GFR + V ++ + V Sbjct: 1 MDSLLFTATSGASRVLKAQHVRSNNLSNADTAGFRADMERVRSV--EMQGPGFDGRTMVV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + G + TG LD A+ G+ + ++E+P TR G +V G ++ +G Sbjct: 59 TNSASTRFDAGDIVKTGRPLDVAVMGEGYLSVETPAGNEAYTRAGNIQVDTFG-ALTING 117 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ-GFVRRENSGIS 178 + D + + QK EI G+ I G G + + +++E+ + Sbjct: 118 FPVLGDNGPLVVPDYQKIEISERGQVSVIPPGGGAEIVAGTLKLVKPEINQLQKESDSLL 177 Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 ++ P V + +E SN +++ E+ ++ LT+ F ++ +++ +A Sbjct: 178 HSVDGVPFAADETVQLSPEHIEGSNVSAIDELVSVMSLTRNFEMQVRMMKTA-ETLAKAG 236 Query: 239 RNI 241 + Sbjct: 237 NKL 239 >gi|237755436|ref|ZP_04584061.1| flagellar basal-body rod protein FlgF [Sulfurihydrogenibium yellowstonense SS-5] gi|237692400|gb|EEP61383.1| flagellar basal-body rod protein FlgF [Sulfurihydrogenibium yellowstonense SS-5] Length = 236 Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats. Identities = 56/239 (23%), Positives = 103/239 (43%), Gaps = 13/239 (5%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV-KFSEVVGAIKNDIDQKISFVASGK 63 I + ++L T +N++N++T GF+ + + + S+ + K + + F Sbjct: 8 IYILASGGERATEQLDTTTNNIANSNTPGFKKLLLREMSQKIPENKGKVGDLLVFPRFMD 67 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPV 123 + G I T LD A+ GD +F +ES G TR+G F + +G LV +G Y + Sbjct: 68 SPVLNFQGPLIKTENNLDLAIVGDGFFTVESAIGRYYTRNGHFSINQEGYLVDVNGAYVL 127 Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183 +I +D F + KGEI Q G++ + + ++ Q G Sbjct: 128 ---DENFRRIQIQDSKFQITPKGEIYQNGQITGRIRVVNLQNLQAVGSSYYQGQEQQTTN 184 Query: 184 TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 +K+G+LE +N N + EM +MI+ ++F+ L + + + I Sbjct: 185 F--------EIKQGYLEGANLNVVKEMVEMINNHRRFDIYMNLAKSLD-MLEGKVNEIG 234 >gi|255767784|ref|NP_391520.2| flagellar hook-basal body protein [Bacillus subtilis subsp. subtilis str. 168] gi|254763418|sp|P39753|FLHP_BACSU RecName: Full=Flagellar hook-basal body complex protein flhP gi|225185412|emb|CAB15656.2| putative flagellar hook-basal body protein [Bacillus subtilis subsp. subtilis str. 168] Length = 269 Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats. Identities = 51/270 (18%), Positives = 97/270 (35%), Gaps = 29/270 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M S L+Q++ T++ N+SN++T G++ FSE+V + +D+K VA Sbjct: 1 MLRSMLTASTTLNQLQQQIDTISSNLSNSNTTGYKAKDTNFSELVRQQFDQVDEKNEEVA 60 Query: 61 SGKEYLS---------------KEVGSFISTGTELDFALEGDA-WFALESPRGIILTRDG 104 ++ + GS T +LD A + + TRDG Sbjct: 61 KARKTPPGLRLGVGAMMSSRLVSDQGSIQKTDRDLDIAFTSPYQYLQVNVNGNRQYTRDG 120 Query: 105 RFKV-----TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM- 158 V + + YPVLD + I + + + G ++ Sbjct: 121 ALYVTPSAANANQLQLVTGNGYPVLDENGNTVNIDSSMKNITINKNGTLTASDGNAVQRF 180 Query: 159 --GLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT----VKRGFLEDSNANSMYEMGQ 212 G+ V+ Q N+ S + E +++G LE SN + +M Sbjct: 181 NLGVVQVNNPQELKSEGNNLFSIDNAAAFEELNGANRQNIGMQQGSLEMSNVDISEQMTD 240 Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 +I + + + I ++ + I ++ Sbjct: 241 LITSQRSYQLNSRTITMGDQMLG-LINSVR 269 >gi|194016593|ref|ZP_03055207.1| flagellar hook-basal body complex protein FlhO [Bacillus pumilus ATCC 7061] gi|194012066|gb|EDW21634.1| flagellar hook-basal body complex protein FlhO [Bacillus pumilus ATCC 7061] Length = 279 Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats. Identities = 42/280 (15%), Positives = 97/280 (34%), Gaps = 42/280 (15%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTI---KVKFSEVVG----------- 46 M +A +A E+R +++N++N +T G++ F E++ Sbjct: 1 MLKGLYTATSAMIAQERRTEMLSNNIANANTPGYKADEGTMRAFPEMLLSRMESGRFQTS 60 Query: 47 -------AIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA----------- 88 + I + + G+ +T D AL + Sbjct: 61 SGKGFSVPQQTPIGGINTGTYMQELIPQFTQGTLKTTDQTTDVALVENNVPINPETNQKS 120 Query: 89 --WFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG 146 ++A+ +P G+ T+ + + ++ +G+ + I + E F V G Sbjct: 121 ALFYAVNTPEGVRYTKSSSITMNAQ-NQLTINGRALLSVTGQP---ITVQSENFKVNADG 176 Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV----TVKRGFLEDS 202 +S+ G+ + + + ++ R N ++ T+ +G E S Sbjct: 177 TVSENGQNLGQIDVRVAMDTRNLAREGNDLYRTADNQPLPSAVNNGQMSYTLSQGVSELS 236 Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 N + +M + F + ++ +KS+ +A+ I Sbjct: 237 NVDVTKSYTEMTTAYRAFETNQKVVQAYDKSLEKAVNEIG 276 >gi|163784307|ref|ZP_02179217.1| flagellar hook basal-body protein FlgG [Hydrogenivirga sp. 128-5-R1-1] gi|159880425|gb|EDP74019.1| flagellar hook basal-body protein FlgG [Hydrogenivirga sp. 128-5-R1-1] Length = 238 Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats. Identities = 51/239 (21%), Positives = 98/239 (41%), Gaps = 11/239 (4%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV-KFSEVVGAIKNDIDQKISFVASGK 63 I + ++L T +N++N +T GF+ + + + S+ + + + F K Sbjct: 8 IYILASGGERALEQLDTTTNNLANVNTPGFKKLLLKEMSQKIPDNQGQSKELFVFPRFEK 67 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPV 123 + GS T LD A++G+ +F + I LTR+G FK+ G LV + PV Sbjct: 68 TPVVIAQGSLKKTDRPLDLAIDGEGFFQVRFQNQIFLTRNGHFKLDSTGILVDVNSN-PV 126 Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183 LD I++ + + + V S+ Q S +P+ Sbjct: 127 LDTQGKVIKLNSTENVTITKDGSIYQNNELV----AKLSIVNYQSVKPIGESYYAPSSS- 181 Query: 184 TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 + + + +GFLE+SN N + M ++I+ ++ L+ + ++I I Sbjct: 182 ---QTNASYEIHQGFLENSNVNPIKAMTELINAQRRMEMYGNLMKALDSVEQKSI-EIG 236 >gi|157371206|ref|YP_001479195.1| flagellar basal body rod protein FlgF [Serratia proteamaculans 568] gi|157322970|gb|ABV42067.1| flagellar basal-body rod protein FlgF [Serratia proteamaculans 568] Length = 251 Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats. Identities = 50/247 (20%), Positives = 87/247 (35%), Gaps = 13/247 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A ++ S A+N++N T GFR V + + V Sbjct: 1 MDHAIYTAMGAARQTLEQQSVTANNLANASTPGFRAQLSALRAV--PVDGPSLLTRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119 + G+ T LD AL+ D + A+ P G TR+G +++ G ++ G Sbjct: 59 ASTPGADMSQGALNYTARPLDVALQQDGFLAVSLPDGGEAYTRNGNLQISSTG-QLTVQG 117 Query: 120 KYPVLDMASVPIQIPQKDEIF---NVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + + D + + + I + + L V V R + G Sbjct: 118 RPVMGDGGPIEVPPSAEITIAADGTISALNAGDPPNTLAQIGRLKLVKADAREVTRGDDG 177 Query: 177 ISPNIPPTPLEDLSG------VTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + P T + + V V G LE SN M M MI ++F +I Sbjct: 178 LFRLTPETQQQRGNQLPNDPLVRVMPGVLEGSNVKPMETMVDMIANARRFEMQMKVIHSV 237 Query: 231 EKSMLEA 237 +++ A Sbjct: 238 DENEQRA 244 >gi|296331269|ref|ZP_06873741.1| flagellar basal body rod protein FlgG [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305676256|ref|YP_003867928.1| putative flagellar hook-basal body protein [Bacillus subtilis subsp. spizizenii str. W23] gi|296151384|gb|EFG92261.1| flagellar basal body rod protein FlgG [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305414500|gb|ADM39619.1| putative flagellar hook-basal body protein [Bacillus subtilis subsp. spizizenii str. W23] Length = 269 Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats. Identities = 48/270 (17%), Positives = 95/270 (35%), Gaps = 29/270 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M S L+Q++ T++ N+SN++T G++ FSE+V + +D+K VA Sbjct: 1 MLRSMLTASTTLNQLQQQIDTISSNLSNSNTTGYKAKDTNFSELVRQQFDQVDEKNEEVA 60 Query: 61 SGKEYLS---------------KEVGSFISTGTELDFALEGDA-WFALESPRGIILTRDG 104 ++ + GS T +LD A + + TRDG Sbjct: 61 KARKTPPGLRLGVGAMMNSRLVSDQGSIQKTDRDLDIAFTSPYQYLQVNVNGNRQYTRDG 120 Query: 105 RFK-----VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM- 158 + + PVLD + I + + + G ++ Sbjct: 121 ALYLTPSVANANQLQLVTGNGNPVLDENGNTVNIDSSMKNITINKNGTLTASDGSAVQRF 180 Query: 159 --GLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT----VKRGFLEDSNANSMYEMGQ 212 G+ V+ Q N+ S + + +++G LE SN + +M Sbjct: 181 NLGVVQVNNPQELKSEGNNLFSIDNAAAFEQLNGANRQNIGIEQGSLEMSNVDISEQMTD 240 Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 +I + + + I ++ + I ++ Sbjct: 241 LITSQRSYQLNSRTITMGDQMLG-LINSVR 269 >gi|269960117|ref|ZP_06174493.1| Flagellar basal-body rod protein flgF [Vibrio harveyi 1DA3] gi|269835088|gb|EEZ89171.1| Flagellar basal-body rod protein flgF [Vibrio harveyi 1DA3] Length = 243 Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats. Identities = 41/242 (16%), Positives = 89/242 (36%), Gaps = 4/242 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + + ++N+SN DT GFR + V ++ + V Sbjct: 1 MDSLLFTATSGASRVLKAQHVRSNNLSNADTAGFRADMERVRSV--ELQGAGFDGRTMVV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + G + TG LD A+ G+ + +E+P TR G KV G++ Sbjct: 59 TNSAATRFDSGDIMKTGRPLDVAIMGEGYLTVETPIGNEAYTRAGNIKVDTFGAMSINGF 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 + V + + G + L V +++E+ + Sbjct: 119 PVVGENGPIVVPDFQKIEISERGRVSVIPPGGGAEVEVGTLKMVKPPINQLQKESDSLLH 178 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 ++ P V + +E SN +++ E+ ++ LT+ F ++ +++ +A Sbjct: 179 SVDGVPFPADETVQLSPEHIEGSNVSAIDELLSVMSLTRNFEMQVRMMKTA-ETLAQAGN 237 Query: 240 NI 241 + Sbjct: 238 KL 239 >gi|311105936|ref|YP_003978789.1| flagellar basal-body rod protein FlgF [Achromobacter xylosoxidans A8] gi|310760625|gb|ADP16074.1| flagellar basal-body rod protein FlgF [Achromobacter xylosoxidans A8] Length = 254 Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats. Identities = 51/247 (20%), Positives = 98/247 (39%), Gaps = 11/247 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + + +++NM+N +T GFR + V + ++S VA Sbjct: 1 MDRIIYTAMNGAARITEHQAALSNNMANVNTAGFREQIALYRSVPVTDGTSLPTRVSTVA 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDA-WFALESPRGIILTRDGRFKVTDDGSLVSASG 119 S S ++G+ +TG +LD AL + W A+++P+G TR G +V +G L ++ G Sbjct: 61 S-TPRNSFQMGNMQTTGRDLDVALSSERGWIAVQTPQGEAYTRAGGLQVGINGLLQTSLG 119 Query: 120 KYPVLDMASVPIQIPQ----KDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 + + D Q + G ++ + + + Sbjct: 120 QPVLSDQGGPIDIPDQAALTITADGTITAIGAGDAPNNILNLGRIKLASPQNDQLVHGDD 179 Query: 176 GISPNI-----PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 G+ P P+ + + G LE SN N M M MI ++F +I ++ Sbjct: 180 GVFRMAPVNGQPAPPVPADPSLRLLSGVLEGSNTNPMAAMVGMIANARRFEQQMQVIQQS 239 Query: 231 EKSMLEA 237 +++ A Sbjct: 240 DRNAERA 246 >gi|270262400|ref|ZP_06190671.1| flagellar basal-body rod protein FlgF [Serratia odorifera 4Rx13] gi|270043084|gb|EFA16177.1| flagellar basal-body rod protein FlgF [Serratia odorifera 4Rx13] Length = 251 Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats. Identities = 51/247 (20%), Positives = 88/247 (35%), Gaps = 13/247 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A ++ S A+N++N T GFR V + + V Sbjct: 1 MDHAIYTAMGAARQTLEQQSVTANNLANASTPGFRAQLSALRAV--PVDGPSLPTRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119 + G+ T LD AL+ D + A+ P G TR+G +++ G ++ G Sbjct: 59 ASTPGADMSQGALNYTARPLDVALQQDGFLAVSLPDGGEAYTRNGNIQISSAG-QLTVQG 117 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEK---GEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + + D + + + I G + L V + V R + G Sbjct: 118 RPLMGDGGPIEVPPSAEITIAADGTISALNAGDPPNTIAQIGRLKLVKANAREVMRGDDG 177 Query: 177 ISPNIP------PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + P L++ V V G LE SN M M MI ++F +I Sbjct: 178 LFRLTPETQQQRGNQLQNDPLVRVMPGVLEGSNVKPMETMVDMIANARRFEMQMKVIHSV 237 Query: 231 EKSMLEA 237 +++ A Sbjct: 238 DENEQRA 244 >gi|157160604|ref|YP_001457922.1| flagellar basal body rod protein FlgF [Escherichia coli HS] gi|157066284|gb|ABV05539.1| flagellar basal-body rod protein FlgF [Escherichia coli HS] Length = 251 Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 84/252 (33%), Gaps = 16/252 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V ++ + V Sbjct: 1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G T LD AL+ D W A+++ TR+G +V G L Sbjct: 59 ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 +PV+ A + G + T+ V + V+R + Sbjct: 117 GHPVIGEAGPIAVPEGAEITIAADGTISALNPGDPVNTVAPVGRLKLVKATGSEVQRGDD 176 Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 GI L+ + V G LE SN N++ M MI ++F +I Sbjct: 177 GIFRLSAESQATRGPILQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236 Query: 230 NEKSMLEAIRNI 241 + + A + Sbjct: 237 VDDNAGRA-NQL 247 >gi|163789629|ref|ZP_02184067.1| flagellar hook-basal body complex protein [Carnobacterium sp. AT7] gi|159875161|gb|EDP69227.1| flagellar hook-basal body complex protein [Carnobacterium sp. AT7] Length = 252 Score = 119 bits (297), Expect = 5e-25, Method: Composition-based stats. Identities = 43/256 (16%), Positives = 99/256 (38%), Gaps = 20/256 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV------------VGAI 48 M S + L+++ ++ N++N +T G+++ ++ S + Sbjct: 1 MIRSLTTLSNSINILQKKQENISANVANINTSGYKSQEIIQSTRASEMMSNHLGGPLLNQ 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFK 107 + DI + + G +T + D A++GD +F +E+ TR+G F Sbjct: 61 QQDIGGFTFGSQIDEIVQNFNQGGLKATASTTDVAIQGDGFFTVEAANGETSYTRNGNFN 120 Query: 108 VTDDGSLVSASGKYPVL-DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 V D G LV+ G + I F + +G I+ G + + + D + Sbjct: 121 VNDAGELVTQEGYRVLGVTANGQAAPIQVDGADFTIDARGTIAGTGMSL---MITNFDDT 177 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 G R ++ + +LE SN ++ E+ ++ +++ F + Sbjct: 178 AGLTRVGDTLFTGQGGTVQTGGTVVQQ---SYLETSNVETVDEITNLMQVSRAFEANQKA 234 Query: 227 IDENEKSMLEAIRNIA 242 + ++++ +A+ + Sbjct: 235 LSAADETLRKAVNEVG 250 >gi|321313186|ref|YP_004205473.1| flagellar basal body rod protein FlgG [Bacillus subtilis BSn5] gi|291486214|dbj|BAI87289.1| flagellar hook-basal body protein [Bacillus subtilis subsp. natto BEST195] gi|320019460|gb|ADV94446.1| flagellar basal body rod protein FlgG [Bacillus subtilis BSn5] Length = 269 Score = 119 bits (297), Expect = 5e-25, Method: Composition-based stats. Identities = 51/270 (18%), Positives = 97/270 (35%), Gaps = 29/270 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M S L+Q++ T++ N+SN++T G++ FSE+V + +D+K VA Sbjct: 1 MLRSMLTASTTLNQLQQQIDTISSNLSNSNTTGYKAKDTNFSELVRQQFDQVDEKNEEVA 60 Query: 61 SGKEYLS---------------KEVGSFISTGTELDFALEGDA-WFALESPRGIILTRDG 104 ++ + GS T +LD A + + TRDG Sbjct: 61 KARKTPPGLRLGVGAMMNSRLVSDQGSIQKTDRDLDIAFTSPYQYLQVNVNGNRQYTRDG 120 Query: 105 RFKV-----TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM- 158 V + + YPVLD + I + + + G ++ Sbjct: 121 ALYVTPSAANANQLQLVTGNGYPVLDENGNTVNIDSSMKNITINKNGTLTASDGNAVQRF 180 Query: 159 --GLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT----VKRGFLEDSNANSMYEMGQ 212 G+ V+ Q N+ S + E +++G LE SN + +M Sbjct: 181 NLGVVQVNNPQELKSEGNNLFSIDNAAAFEELNGANRQNIGMQQGSLEMSNVDISEQMTD 240 Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 +I + + + I ++ + I ++ Sbjct: 241 LITSQRSYQLNSRTITMGDQMLG-LINSVR 269 >gi|260779346|ref|ZP_05888238.1| flagellar basal-body rod protein FlgF [Vibrio coralliilyticus ATCC BAA-450] gi|260605510|gb|EEX31805.1| flagellar basal-body rod protein FlgF [Vibrio coralliilyticus ATCC BAA-450] Length = 243 Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats. Identities = 42/242 (17%), Positives = 89/242 (36%), Gaps = 4/242 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + + ++N+SN DT GFR + S V ++ + V Sbjct: 1 MDSLLFTATSGASRVLKAQHVRSNNLSNADTAGFRADMERVSSV--QLQGSGFDGRTMVV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + G + TG LD A+ G+ + +++ TR G KV G+L Sbjct: 59 TNSASTRFDEGDIVKTGRALDVAVMGEGYLTVQTADGQEAYTRAGNIKVDPFGALSINGF 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 V + + G + L V +++E+ + Sbjct: 119 AVIGEGGPLVLPDYQKVEISERGRISVVPPGGGAELEVGTLKLVKPETNQLQKESDSLLH 178 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 ++ P E V + +E SN +++ E+ ++ LT+ F ++ +++ +A Sbjct: 179 SVDGNPFEVDQTVQLAPEHIEGSNVSAIDELLNVMSLTRNFEMQVRMMKTA-ETLAQAGN 237 Query: 240 NI 241 + Sbjct: 238 KL 239 >gi|531461|gb|AAA67879.1| orfF [Bacillus subtilis subsp. subtilis str. 168] Length = 271 Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats. Identities = 48/276 (17%), Positives = 99/276 (35%), Gaps = 41/276 (14%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVV----------GA 47 M +A +A ++R +++N++N +T G++ + F E++ G Sbjct: 1 MLKGLYTATSAMIAQQRRTEMLSNNIANANTSGYKADQGSMRAFPEMLLSRIESKSPAGT 60 Query: 48 IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA-------------WFALES 94 + +I + V + GS ST D AL + ++ +++ Sbjct: 61 SRTEIGSVNTGVYMQELKPLFTQGSLKSTDQPTDIALIENQVPMSAETNEKAALFYPVQT 120 Query: 95 PRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV 154 GI ++ F + ++ + ++ +G+ + I +E F V E G ++ G+ Sbjct: 121 ADGIRYSKSSTFSLNEN-NQLTINGRPILSTDRQP---ITVDNENFTVSENGTVTTNGRT 176 Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVK--------RGFLEDSNANS 206 + + + + R N S V RGF SN + Sbjct: 177 AGQIDVRMAEDVRNLKRDGNDLYSTADGNDLPSARGNNQVAYSLKTRRLRGF---SNVDV 233 Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 +M + F + +I +KSM +A I Sbjct: 234 TSAYTEMTEAYRSFEANQKVIQAYDKSMDKAANEIG 269 >gi|312112590|ref|YP_003990906.1| fagellar hook-basal body protein [Geobacillus sp. Y4.1MC1] gi|311217691|gb|ADP76295.1| fagellar hook-basal body protein [Geobacillus sp. Y4.1MC1] Length = 285 Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats. Identities = 50/282 (17%), Positives = 99/282 (35%), Gaps = 41/282 (14%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ------- 54 S L+Q+L +++N++N++T GF+ + F E++ ++ Q Sbjct: 4 LRSMITAANTMAQLQQQLDVISNNIANSNTAGFKRRETSFGELLAQQFTNLPQDEAPRLT 63 Query: 55 -----KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL------ESPRGIILTRD 103 + + + G+ + T LD AL + F + I TR Sbjct: 64 PNGLRYGVGARLAETNIVLKQGAIMQTDRPLDVALTKEGQFFRVLIQGENGTQEIGYTRA 123 Query: 104 GRFKVTDDGSLVS-----ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158 G F +T + S PVLD + PI +P + + + G I+ M Sbjct: 124 GAFYLTPSAGNQNVLMLVTSDGNPVLDENNAPIWLPNGYKDIEISDNGTITATAPDGRIM 183 Query: 159 GLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----------------SGVTVKRGFLED 201 ++ ++ + NI P + + + + +G LE Sbjct: 184 RRVNIGVTSILRPQLLQSAGNNIWTLPDFNALNVNAADVAVNMTGNLRAQIGMTQGALEQ 243 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 SN + E+ M+ + + I +++ + I I S Sbjct: 244 SNVDLGTELTDMMITERSYQLNARSISISDQMLG-LINGIRS 284 >gi|220917700|ref|YP_002493004.1| flagellar basal-body rod protein FlgF [Anaeromyxobacter dehalogenans 2CP-1] gi|219955554|gb|ACL65938.1| flagellar basal-body rod protein FlgF [Anaeromyxobacter dehalogenans 2CP-1] Length = 235 Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats. Identities = 51/239 (21%), Positives = 86/239 (35%), Gaps = 11/239 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + +A ++L VADN++N T GF+ + F + Q + A Sbjct: 1 MADGIYVSMCGAVARAEQLDAVADNLANAQTPGFKAARPAFESFLAP---GAAQDKRYAA 57 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119 + + G TG LD E + + + G TRDGR + D LVS Sbjct: 58 AVATGIDLRPGPTQRTGNALDVVPEAGMFLTVRTAGGGTAYTRDGRLTLDPDRRLVS--- 114 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 L + D V G + +A +GL +D R S ++P Sbjct: 115 DGRPLLSPRGEPIVLPPDLEARVDAAGRVWAGDVEVAALGLARLDGPVD--RVGPSLLAP 172 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 L + V+ G LE NA ++ Q++ + + + I + A+ Sbjct: 173 GAGGRALP--AEGAVRSGELELGNAGALEASIQLVSAQRAYEASLQAIQTYRQLDQRAV 229 >gi|323190589|gb|EFZ75861.1| flagellar basal-body rod protein FlgF [Escherichia coli RN587/1] Length = 251 Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 82/252 (32%), Gaps = 16/252 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V + + V Sbjct: 1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVGGLSLPTRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G T LD AL+ D W A+++ TR+G +V G L Sbjct: 59 ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 +PV+ A + G T+ V + V+R + Sbjct: 117 GHPVVGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176 Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 GI L+ + V G LE SN N++ M MI ++F +I Sbjct: 177 GIFRLSAESQATRGPVLQADPTLRVLSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236 Query: 230 NEKSMLEAIRNI 241 + + A + Sbjct: 237 VDDNAGRA-NQL 247 >gi|146311247|ref|YP_001176321.1| flagellar basal body rod protein FlgF [Enterobacter sp. 638] gi|145318123|gb|ABP60270.1| flagellar basal-body rod protein FlgF [Enterobacter sp. 638] Length = 251 Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 80/252 (31%), Gaps = 16/252 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V ++ + V Sbjct: 1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNAMRAV--PVEGLTLPTRTLVI 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSL----V 115 + G T LD AL+ D W A+++ TR+G +V G L Sbjct: 59 ASTPGADMTPGQMDYTSRPLDVALQQDGWLAVQAADGSEGYTRNGNIQVDSTGQLTIQGH 118 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA------TMGLYSVDMSQGF 169 G+ L + D + G+ + G G Sbjct: 119 PVIGESGPLTVPEGSEITIAADGTISALNPGDPPNTVAPVGKLKLVKAEGNEVTRGDDGL 178 Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 R S ++ L+ + + G LE SN + M MI ++F +I Sbjct: 179 FRTSASALA--ARGATLQPDPSIRIMSGVLEGSNVKPVAAMTDMIASARRFEMQMKVITS 236 Query: 230 NEKSMLEAIRNI 241 +++ A + Sbjct: 237 VDENAGRA-NQL 247 >gi|331682579|ref|ZP_08383198.1| flagellar basal-body rod protein FlgF [Escherichia coli H299] gi|331080210|gb|EGI51389.1| flagellar basal-body rod protein FlgF [Escherichia coli H299] Length = 251 Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 83/252 (32%), Gaps = 16/252 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V ++ + V Sbjct: 1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G T LD AL+ D W A+++ TR+G +V G L Sbjct: 59 ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 +PV+ A + G T+ V + V+R + Sbjct: 117 GHPVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176 Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 GI L+ + V G LE SN N++ M MI ++F +I Sbjct: 177 GIFRLSAETQTTRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236 Query: 230 NEKSMLEAIRNI 241 + + A + Sbjct: 237 VDDNAGRA-NQL 247 >gi|295400718|ref|ZP_06810695.1| fagellar hook-basal body protein [Geobacillus thermoglucosidasius C56-YS93] gi|294977299|gb|EFG52900.1| fagellar hook-basal body protein [Geobacillus thermoglucosidasius C56-YS93] Length = 285 Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats. Identities = 50/282 (17%), Positives = 99/282 (35%), Gaps = 41/282 (14%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ------- 54 S L+Q+L +++N++N++T GF+ + F E++ ++ Q Sbjct: 4 LRSMITAANTMAQLQQQLDVISNNIANSNTAGFKRRETSFGELLAQQFANLPQDEAPRLT 63 Query: 55 -----KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL------ESPRGIILTRD 103 + + + G+ + T LD AL + F + I TR Sbjct: 64 PNGLRYGVGARLAETNIVLKQGAIMQTDRPLDVALTKEGQFFRVLIQGENGTQEIGYTRA 123 Query: 104 GRFKVTDDGSLVS-----ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158 G F +T + S PVLD + PI +P + + + G I+ M Sbjct: 124 GAFYLTPSAGNQNVLMLVTSDGNPVLDENNAPIWLPNGYKDIEISDNGTITATAPDGRIM 183 Query: 159 GLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----------------SGVTVKRGFLED 201 ++ ++ + NI P + + + + +G LE Sbjct: 184 RRVNIGVTSILRPQLLQSAGNNIWTLPDFNALNVNAADVAVNMTGNLRAQIGMTQGALEQ 243 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 SN + E+ M+ + + I +++ + I I S Sbjct: 244 SNVDLGTELTDMMITERSYQLNARSISISDQMLG-LINGIRS 284 >gi|172058673|ref|YP_001815133.1| flagellar basal body rod protein [Exiguobacterium sibiricum 255-15] gi|171991194|gb|ACB62116.1| flagellar basal body rod protein [Exiguobacterium sibiricum 255-15] Length = 262 Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats. Identities = 47/265 (17%), Positives = 92/265 (34%), Gaps = 29/265 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAI--------- 48 M A AL+++ +++N++N T GFR + F E++ Sbjct: 1 MLRGMYTASGAMQALQRQQEMLSNNLANARTPGFRADQASLRTFPEMMIQQSGVNEQSGV 60 Query: 49 --KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFAL---EGDAWFALES------PRG 97 + + + + V + +GS TG D + EG A F + Sbjct: 61 RSRGTVGKLATGVFMQAATPNFALGSITETGNATDLQISSLEGAALFTIRHADPATGEEE 120 Query: 98 IILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157 + T +G+F V DG L + + D + + + + G+ I Sbjct: 121 TLYTTNGQFAVGQDGLLRTTENDLVLGDAGQPLNVVNEDFTV--SADGAVTDGNGQAIGN 178 Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217 +GL + + R N + + V +G LE N M +M Sbjct: 179 LGLVVTNQPETLERTGNGLFRSPDA----LNGGAIKVDQGVLELGNVEVEQTMTEMNAGL 234 Query: 218 QKFNSITTLIDENEKSMLEAIRNIA 242 ++F + +I +++ +A+ I Sbjct: 235 RQFEANQKVIQAYDRTAEKAVSEIG 259 >gi|324113872|gb|EGC07846.1| flagellar basal-body rod protein FlgF [Escherichia fergusonii B253] gi|325497615|gb|EGC95474.1| flagellar basal body rod protein FlgF [Escherichia fergusonii ECD227] Length = 251 Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats. Identities = 51/252 (20%), Positives = 83/252 (32%), Gaps = 16/252 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V ++ + V Sbjct: 1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G T LD AL+ D W A+++ TR+G +V G L Sbjct: 59 ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPGGQL--TIQ 116 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 +PV+ A + G T+ V S V+R + Sbjct: 117 GHPVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGKLKLVKASDNEVQRGDD 176 Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 GI L+ + V G LE SN N++ M MI ++F +I Sbjct: 177 GIFRLSAESQATRGPVLQADPSLRVMSGVLEGSNVNAVSAMSDMIANARRFEMQMKVISS 236 Query: 230 NEKSMLEAIRNI 241 + + A + Sbjct: 237 VDDNEGRA-NQL 247 >gi|251799752|ref|YP_003014483.1| hypothetical protein Pjdr2_5791 [Paenibacillus sp. JDR-2] gi|247547378|gb|ACT04397.1| protein of unknown function DUF1078 domain protein [Paenibacillus sp. JDR-2] Length = 275 Score = 118 bits (295), Expect = 7e-25, Method: Composition-based stats. Identities = 47/275 (17%), Positives = 104/275 (37%), Gaps = 34/275 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS--- 57 M +S + AL+Q+L +ADN++N +TVG++ + F +++ + D Sbjct: 1 MNSSMINASVSMNALQQKLDMLADNIANVNTVGYKRKEATFEDLLNNTRKQPDAFNQPGR 60 Query: 58 ----------FVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL--ESPRGIILTRDGR 105 + + G+ +T + D A+EGDA F + + TR+G Sbjct: 61 LTSLNFNQGWGSRLAMIQPNLQQGTIKTTEKDTDLAIEGDALFEVAVNANGDRAYTRNGA 120 Query: 106 FK-----------VTDDGSLV---SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQK 151 + T +G V + +G+ P++ + +++ V G + Sbjct: 121 LQLTVAANGDTILATPEGYPVVANTPAGEGPLVVPSGYQLRVNADGTAEGVATDGSTIEL 180 Query: 152 GKV---IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-TVKRGFLEDSNANSM 207 G + AT ++ + ++ + +++G LE SN N Sbjct: 181 GSIKLVQATRPAALTLVADNLYEIADGINVADVLQNVTPNGENGIALRQGALEQSNVNLG 240 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 EM ++I++ + + + ++ M ++ Sbjct: 241 DEMTELINVQRAYQMAARALTSSDTMMG-LANSLR 274 >gi|197122908|ref|YP_002134859.1| flagellar basal body rod protein [Anaeromyxobacter sp. K] gi|196172757|gb|ACG73730.1| flagellar basal body rod protein [Anaeromyxobacter sp. K] Length = 235 Score = 118 bits (295), Expect = 7e-25, Method: Composition-based stats. Identities = 52/239 (21%), Positives = 87/239 (36%), Gaps = 11/239 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + +A ++L VADN++N T GF+ + F + Q + A Sbjct: 1 MADGIYVSMCGAVARAEQLDAVADNLANAQTPGFKAARPAFESFLAP---GAAQDKRYAA 57 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119 + + G TG LD E + + + G TRDGR + D LVS Sbjct: 58 AVATGIDLRPGPTQRTGNALDVVPEAGMFLTVRTAGGGTAYTRDGRLTLDPDRRLVS--- 114 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 L A + D V G + +A +GL +D R S ++P Sbjct: 115 DGRPLLSAQGEPIVLPPDLEARVDAAGRVWAGDVEVAALGLARLDGPVD--RVGPSLLAP 172 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 L + V+ G LE NA ++ Q++ + + + I + A+ Sbjct: 173 GAGGRALP--AEGAVRSGELELGNAGALEASIQLVSAQRAYEASLQAIQTYRQLDQRAV 229 >gi|145297455|ref|YP_001140296.1| lateral flagellar basal-body rod protein LfgF [Aeromonas salmonicida subsp. salmonicida A449] gi|142850227|gb|ABO88548.1| lateral flagellar basal-body rod protein LfgF [Aeromonas salmonicida subsp. salmonicida A449] Length = 236 Score = 118 bits (295), Expect = 7e-25, Method: Composition-based stats. Identities = 45/235 (19%), Positives = 80/235 (34%), Gaps = 5/235 (2%) Query: 9 LAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV-VGAIKNDIDQKISFVASGKEYLS 67 ++ A+N++N +T GFR F V A+ D Sbjct: 1 MSGAQHTLMAQQIRANNLANVNTAGFRAD---FERVSAYALTGDGYPSRVMAREEMAGTD 57 Query: 68 KEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYPVLDM 126 + G+ + TG +LD A+ G+ + +++ TR G +V +G L S Sbjct: 58 FKAGALMQTGRKLDVAVRGEGFITVQTADGKEAYTRAGNLEVDAEGLLTLNSRPVLGDGG 117 Query: 127 ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPL 186 V + G + L V+ + + G+ Sbjct: 118 EMVLPAYRDLSFGKDGSLSITPPGGGARLDVGRLKLVNPDPVELVKGPDGLFRLRQGGDA 177 Query: 187 EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 E V + GFLE +N N++ E+ + LT+ F L+ + + R I Sbjct: 178 ETSEQVVLASGFLEGANVNAVDELISSMSLTRNFELQVKLMKTADDQARQGARLI 232 >gi|331652130|ref|ZP_08353149.1| flagellar basal-body rod protein FlgF [Escherichia coli M718] gi|331050408|gb|EGI22466.1| flagellar basal-body rod protein FlgF [Escherichia coli M718] Length = 251 Score = 118 bits (295), Expect = 8e-25, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 83/252 (32%), Gaps = 16/252 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V ++ + V Sbjct: 1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G T LD AL+ D W A+++ TR+G +V G L Sbjct: 59 ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 +PV+ A + G T+ V + V+R + Sbjct: 117 GHPVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176 Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 GI L+ + V G LE SN N++ M MI ++F +I Sbjct: 177 GIFRLSAERQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236 Query: 230 NEKSMLEAIRNI 241 + + A + Sbjct: 237 VDDNAGRA-NQL 247 >gi|294084436|ref|YP_003551194.1| flagellar hook protein [Candidatus Puniceispirillum marinum IMCC1322] gi|292664009|gb|ADE39110.1| Flagellar hook protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 269 Score = 118 bits (295), Expect = 8e-25, Method: Composition-based stats. Identities = 43/269 (15%), Positives = 90/269 (33%), Gaps = 34/269 (12%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG--AIKNDIDQKISFVAS 61 I + A + + +++N++N T GF+ +F ++ G K Q Sbjct: 1 MLAIIRSGIAAANKEIGVISNNIANASTNGFKRSSAQFQDIYGIAGEKRAAAQVGKGTVF 60 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESP---RGIILTRDGRFKVTDDGSLVSAS 118 + G+F ++G+ELD A+ G+ F + P + TRDG ++ ++G +V+ Sbjct: 61 DASRRNHAQGAFKTSGSELDLAVAGEGMFIVAPPNAGNELRYTRDGSMRLDENGFIVNNE 120 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLY----------------- 161 G + + + +++ + E I G Sbjct: 121 GHFLIGLDGAPLRLPLRRNPAEDGDVAAEELLTSVSIGVDGQIKATYAGAMTRGNGAVIN 180 Query: 162 -------SVDMSQGFVRRENSGISPNI-----PPTPLEDLSGVTVKRGFLEDSNANSMYE 209 + N N + V G LE SN E Sbjct: 181 RGTIALARFQNEADLTSKGNGQFIMNAKTGLPAVGAASQGNFGDVLSGNLEVSNVKINDE 240 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAI 238 + MI Q +++ + ++ + + + + Sbjct: 241 LTSMIRAQQAYSASSRMLQADSDIVKKFL 269 >gi|317492427|ref|ZP_07950856.1| flagellar basal-body rod protein FlgF [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919766|gb|EFV41096.1| flagellar basal-body rod protein FlgF [Enterobacteriaceae bacterium 9_2_54FAA] Length = 251 Score = 118 bits (295), Expect = 8e-25, Method: Composition-based stats. Identities = 48/251 (19%), Positives = 89/251 (35%), Gaps = 14/251 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A ++ + A+NM+N T GFR V ++ D + + VA Sbjct: 1 MDHAIYTAMGAASQTLEQQAITANNMANASTPGFRAQLAALRAV--PVEGDSIETRTLVA 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + +G T LD AL+ D W A+ + TR+G ++ G +++ G Sbjct: 59 ASTPMHDMSMGKLDYTERPLDVALQQDGWLAVRNADGTEAYTRNGNLQINTAG-QLTSQG 117 Query: 120 KYPVLDMASVPIQIPQKDEIF---NVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + D + I + I + G Q L V + + + G Sbjct: 118 NLVIGDNGPIAIPDRAEITIAADGTITALGAGDQPNTTTQVGRLKLVKATSQEMAHGDDG 177 Query: 177 ISPNIPPTPLEDL------SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + P + + + G LE SN + M MI ++F +I Sbjct: 178 LFHLTPEAQQQRGATLTLDPEMRLMPGVLEGSNVKPVDTMVDMIANARRFEMQMKVIRSV 237 Query: 231 EKSMLEAIRNI 241 + + +A + Sbjct: 238 DDNEQKA-NQL 247 >gi|313682109|ref|YP_004059847.1| flagellar hook-basal body protein [Sulfuricurvum kujiense DSM 16994] gi|313154969|gb|ADR33647.1| flagellar hook-basal body protein [Sulfuricurvum kujiense DSM 16994] Length = 270 Score = 118 bits (295), Expect = 8e-25, Method: Composition-based stats. Identities = 50/266 (18%), Positives = 100/266 (37%), Gaps = 24/266 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDIDQKIS 57 MQT + +A R+ T+A N++N +T G++ ++ F+ + ++++ Sbjct: 1 MQTGYYAATGGMVAQFNRMDTIASNLANANTAGYKRDQLITGDFARLYKTAQSELPIANQ 60 Query: 58 FVASGKEYLSKEVGSFISTGTELDFAL---------------EGDAWFALESPRGIILTR 102 A+ + + T D +L + +FA+ +P+GI LTR Sbjct: 61 TEAAAQYFNRALSRVPQITDAYTDQSLGAMQRTDNTFDLALSKEGQFFAVNTPQGIRLTR 120 Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162 DG F + D+G LV+ G + + PQ I + + Sbjct: 121 DGSFTLNDEGKLVNKQGHEVLAADKTPITFNPQDSVITLDKNGQFSTNVPGTTQMVANKR 180 Query: 163 V-----DMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217 + + ++ N+ P +V +GF+E SN N++ EM ++ Sbjct: 181 LLVVEPQNIRNIMKEGNNLYLPEAADPLTPLAESGSVMQGFIEKSNVNAVNEMIALVEAN 240 Query: 218 QKFNSITTLIDENEKSMLE-AIRNIA 242 + +D + + AI +A Sbjct: 241 RLVGMYQKAMDSQMNDLNKDAIEKLA 266 >gi|309798071|ref|ZP_07692446.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 145-7] gi|308118354|gb|EFO55616.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 145-7] Length = 251 Score = 118 bits (295), Expect = 8e-25, Method: Composition-based stats. Identities = 51/252 (20%), Positives = 83/252 (32%), Gaps = 16/252 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V ++ + V Sbjct: 1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G T LD AL+ D W A++S TR+G +V G L Sbjct: 59 ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQSADGSEGYTRNGSIQVDPTGQL--TIQ 116 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 +PV+ A + G T+ V + V+R + Sbjct: 117 GHPVIGEAGPIAVPEGGEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176 Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 GI L+ + V G LE SN N++ M MI ++F +I Sbjct: 177 GIFRLSAESQATRGPILQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236 Query: 230 NEKSMLEAIRNI 241 + + A + Sbjct: 237 VDDNAGRA-NQL 247 >gi|301023264|ref|ZP_07187061.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 69-1] gi|284920900|emb|CBG33963.1| flagellar basal-body rod protein FlgF [Escherichia coli 042] gi|300397109|gb|EFJ80647.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 69-1] Length = 251 Score = 118 bits (294), Expect = 8e-25, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 84/252 (33%), Gaps = 16/252 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V ++ + V Sbjct: 1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G T LD AL+ D W A+++ TR+G +V G L+ Sbjct: 59 ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQLI--IQ 116 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 +PV+ A + G T+ V + V+R + Sbjct: 117 GHPVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176 Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 GI L+ + V G LE SN N++ M MI ++F +I Sbjct: 177 GIFRLSAESQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236 Query: 230 NEKSMLEAIRNI 241 + + A + Sbjct: 237 VDDNAGRA-NQL 247 >gi|157155680|ref|YP_001462311.1| flagellar basal body rod protein FlgF [Escherichia coli E24377A] gi|193064568|ref|ZP_03045648.1| flagellar basal-body rod protein FlgF [Escherichia coli E22] gi|256018666|ref|ZP_05432531.1| flagellar basal body rod protein FlgF [Shigella sp. D9] gi|260843317|ref|YP_003221095.1| flagellar component FlgF of cell-proximal portion of basal-body rod [Escherichia coli O103:H2 str. 12009] gi|260854560|ref|YP_003228451.1| flagellar component FlgF of cell-proximal portion of basal-body rod [Escherichia coli O26:H11 str. 11368] gi|260867440|ref|YP_003233842.1| flagellar component FlgF of cell-proximal portion of basal-body rod [Escherichia coli O111:H- str. 11128] gi|293433367|ref|ZP_06661795.1| flagellar basal-body rod protein FlgF [Escherichia coli B088] gi|300816779|ref|ZP_07096999.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 107-1] gi|300922603|ref|ZP_07138703.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 182-1] gi|301328553|ref|ZP_07221614.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 78-1] gi|332279735|ref|ZP_08392148.1| flagellar basal-body rod protein FlgF [Shigella sp. D9] gi|157077710|gb|ABV17418.1| flagellar basal-body rod protein FlgF [Escherichia coli E24377A] gi|192927820|gb|EDV82434.1| flagellar basal-body rod protein FlgF [Escherichia coli E22] gi|257753209|dbj|BAI24711.1| flagellar component FlgF of cell-proximal portion of basal-body rod [Escherichia coli O26:H11 str. 11368] gi|257758464|dbj|BAI29961.1| flagellar component FlgF of cell-proximal portion of basal-body rod [Escherichia coli O103:H2 str. 12009] gi|257763796|dbj|BAI35291.1| flagellar component FlgF of cell-proximal portion of basal-body rod [Escherichia coli O111:H- str. 11128] gi|291324186|gb|EFE63608.1| flagellar basal-body rod protein FlgF [Escherichia coli B088] gi|300421080|gb|EFK04391.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 182-1] gi|300530553|gb|EFK51615.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 107-1] gi|300844945|gb|EFK72705.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 78-1] gi|323156884|gb|EFZ43018.1| flagellar basal-body rod protein FlgF [Escherichia coli EPECa14] gi|323175692|gb|EFZ61286.1| flagellar basal-body rod protein FlgF [Escherichia coli 1180] gi|323185800|gb|EFZ71161.1| flagellar basal-body rod protein FlgF [Escherichia coli 1357] gi|324117352|gb|EGC11259.1| flagellar basal-body rod protein FlgF [Escherichia coli E1167] gi|332102087|gb|EGJ05433.1| flagellar basal-body rod protein FlgF [Shigella sp. D9] Length = 251 Score = 118 bits (294), Expect = 9e-25, Method: Composition-based stats. Identities = 51/252 (20%), Positives = 83/252 (32%), Gaps = 16/252 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V ++ + V Sbjct: 1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G T LD AL+ D W A++S TR+G +V G L Sbjct: 59 ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQSADGSEGYTRNGSIQVDPTGQL--TIQ 116 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 +PV+ A + G T+ V + V+R + Sbjct: 117 GHPVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176 Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 GI L+ + V G LE SN N++ M MI ++F +I Sbjct: 177 GIFRLSAESQATRGPILQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236 Query: 230 NEKSMLEAIRNI 241 + + A + Sbjct: 237 VDDNAGRA-NQL 247 >gi|318604253|emb|CBY25751.1| flagellar basal-body rod protein FlgF [Yersinia enterocolitica subsp. palearctica Y11] Length = 243 Score = 118 bits (294), Expect = 9e-25, Method: Composition-based stats. Identities = 48/239 (20%), Positives = 90/239 (37%), Gaps = 7/239 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M ++ + A+N++N +T GFR + V Sbjct: 1 MDKLLYTAVSGANRSLTQQQIHANNLANVNTQGFRADLE--RATATQVPGGSYNSRVAVL 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 S + GS TG ELD A++ A+ S + TR+G+ +V DG ++ +G Sbjct: 59 SQNAGVDMTAGSLQETGRELDVAIKDRGLIAVLSGGREVYTRNGQMEVGPDGD-LTINGM 117 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSGI 177 + D ++ + + + G I Q G + + VD+ + + N G+ Sbjct: 118 PVLGDGGAIVLPAYSAVSVADDGTIAIIPQAGGIKTPAEVDRIKLVDIPANQLSKNNRGL 177 Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 N V + LE SN +++ EM I L+++F + ++ E+ Sbjct: 178 LVNRRG-AAARDENVQLVSKHLESSNISAISEMTASISLSRQFEAQIKMMKVAEELAQS 235 >gi|331672597|ref|ZP_08373386.1| flagellar basal-body rod protein FlgF [Escherichia coli TA280] gi|331070240|gb|EGI41606.1| flagellar basal-body rod protein FlgF [Escherichia coli TA280] Length = 251 Score = 118 bits (294), Expect = 9e-25, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 84/252 (33%), Gaps = 16/252 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V ++ + V Sbjct: 1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G T LD AL+ D W A+++ TR+G +V G L Sbjct: 59 ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 +PV+ A + + G T+ V + V+R + Sbjct: 117 GHPVVGEAGPIAVPEGAEITIAADGTISVLNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176 Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 GI L+ + V G LE SN N++ M MI ++F +I Sbjct: 177 GIFRLSAESQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236 Query: 230 NEKSMLEAIRNI 241 + + A + Sbjct: 237 VDDNAGRA-NQL 247 >gi|170020527|ref|YP_001725481.1| flagellar basal body rod protein FlgF [Escherichia coli ATCC 8739] gi|312971214|ref|ZP_07785392.1| flagellar basal-body rod protein FlgF [Escherichia coli 1827-70] gi|169755455|gb|ACA78154.1| flagellar basal-body rod protein FlgF [Escherichia coli ATCC 8739] gi|310336416|gb|EFQ01602.1| flagellar basal-body rod protein FlgF [Escherichia coli 1827-70] Length = 251 Score = 118 bits (294), Expect = 9e-25, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 83/252 (32%), Gaps = 16/252 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V ++ + V Sbjct: 1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G T LD AL+ D W A+++ TR+G +V G L Sbjct: 59 ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 +PV+ A + G T+ V + V+R + Sbjct: 117 GHPVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176 Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 GI L+ + V G LE SN N++ M MI ++F +I Sbjct: 177 GIFRLSAESQATRGPILQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236 Query: 230 NEKSMLEAIRNI 241 + + A + Sbjct: 237 VDDNAGRA-NQL 247 >gi|170680164|ref|YP_001744103.1| flagellar basal body rod protein FlgF [Escherichia coli SMS-3-5] gi|218704485|ref|YP_002412004.1| flagellar basal body rod protein FlgF [Escherichia coli UMN026] gi|293404361|ref|ZP_06648355.1| flgF [Escherichia coli FVEC1412] gi|298380141|ref|ZP_06989746.1| flagellar basal-body rod protein flgF [Escherichia coli FVEC1302] gi|300899596|ref|ZP_07117835.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 198-1] gi|307310145|ref|ZP_07589795.1| flagellar basal-body rod protein FlgF [Escherichia coli W] gi|331662483|ref|ZP_08363406.1| flagellar basal-body rod protein FlgF [Escherichia coli TA143] gi|170517882|gb|ACB16060.1| flagellar basal-body rod protein FlgF [Escherichia coli SMS-3-5] gi|218431582|emb|CAR12461.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli UMN026] gi|291428947|gb|EFF01972.1| flgF [Escherichia coli FVEC1412] gi|298279839|gb|EFI21347.1| flagellar basal-body rod protein flgF [Escherichia coli FVEC1302] gi|300356867|gb|EFJ72737.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 198-1] gi|306909863|gb|EFN40357.1| flagellar basal-body rod protein FlgF [Escherichia coli W] gi|315060355|gb|ADT74682.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli W] gi|320200973|gb|EFW75557.1| Flagellar basal-body rod protein FlgF [Escherichia coli EC4100B] gi|323379084|gb|ADX51352.1| flagellar basal-body rod protein FlgF [Escherichia coli KO11] gi|331060905|gb|EGI32869.1| flagellar basal-body rod protein FlgF [Escherichia coli TA143] Length = 251 Score = 118 bits (294), Expect = 9e-25, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 83/252 (32%), Gaps = 16/252 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V ++ + V Sbjct: 1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G T LD AL+ D W A+++ TR+G +V G L Sbjct: 59 ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 +PV+ A + G T+ V + V+R + Sbjct: 117 GHPVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176 Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 GI L+ + V G LE SN N++ M MI ++F +I Sbjct: 177 GIFRLSAESQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236 Query: 230 NEKSMLEAIRNI 241 + + A + Sbjct: 237 VDDNAGRA-NQL 247 >gi|163784308|ref|ZP_02179218.1| hypothetical protein HG1285_04693 [Hydrogenivirga sp. 128-5-R1-1] gi|159880426|gb|EDP74020.1| hypothetical protein HG1285_04693 [Hydrogenivirga sp. 128-5-R1-1] Length = 200 Score = 118 bits (294), Expect = 9e-25, Method: Composition-based stats. Identities = 39/201 (19%), Positives = 73/201 (36%), Gaps = 21/201 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + A + L +++N++N +TVGF+ + F +++ D Sbjct: 1 MIRALWTSATGMEAQQTNLDVISNNIANVNTVGFKKSRANFEDLIYQNLRDPGVMSSTET 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP-RGIILTRDGRF 106 Q V + GS + T LD A++G +F +E P G TR G F Sbjct: 61 RVPTGMQVGLGVKLSDISKTFSQGSLMKTDRPLDIAIQGKGFFKVELPGGGEAYTRAGNF 120 Query: 107 KVTDDGSLVSASGK------YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 ++ D G +V+ G + I I + ++ V +G + + + + L Sbjct: 121 QIDDQGYIVTPEGYRLSPNIQITAPETLISINISENGNVYAVRNEGGVQ-TTEELGQINL 179 Query: 161 YSVDMSQGFVRRENSGISPNI 181 Y+ G + Sbjct: 180 YNFINPPGLQAIGQNLFKQTD 200 >gi|331646335|ref|ZP_08347438.1| flagellar basal-body rod protein FlgF [Escherichia coli M605] gi|222032830|emb|CAP75569.1| flagellar basal-body rod protein flgF [Escherichia coli LF82] gi|281178186|dbj|BAI54516.1| flagellar basal-body rod protein FlgF [Escherichia coli SE15] gi|312945639|gb|ADR26466.1| flagellar basal body rod protein FlgF [Escherichia coli O83:H1 str. NRG 857C] gi|330910891|gb|EGH39401.1| flagellar basal-body rod protein FlgF [Escherichia coli AA86] gi|331045087|gb|EGI17214.1| flagellar basal-body rod protein FlgF [Escherichia coli M605] Length = 251 Score = 118 bits (294), Expect = 9e-25, Method: Composition-based stats. Identities = 49/252 (19%), Positives = 82/252 (32%), Gaps = 16/252 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V ++ + V Sbjct: 1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G T LD AL+ D W +++ TR+G +V G L Sbjct: 59 ASTPGADMTPGKMDYTSRPLDVALQQDGWLVVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 +PV+ A + G T+ V + V+R + Sbjct: 117 GHPVVGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176 Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 GI L+ + V G LE SN N++ M MI ++F +I Sbjct: 177 GIFRLSAESQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236 Query: 230 NEKSMLEAIRNI 241 + + A + Sbjct: 237 VDDNAGRA-NQL 247 >gi|300928371|ref|ZP_07143905.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 187-1] gi|300463629|gb|EFK27122.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 187-1] Length = 251 Score = 118 bits (294), Expect = 9e-25, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 84/252 (33%), Gaps = 16/252 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + + A N++N T GFR V ++ + V Sbjct: 1 MDHAIYTAMGAASQILNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G T LD AL+ D W A+++ TR+G +V G L Sbjct: 59 ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 +PV+ A + G T+ V + V+R + Sbjct: 117 GHPVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176 Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 GI L+ + V G LE SN N++ M MI ++F +I Sbjct: 177 GIFRLSAETQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236 Query: 230 NEKSMLEAIRNI 241 + + A + Sbjct: 237 VDDNAGRA-NQL 247 >gi|300918679|ref|ZP_07135260.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 115-1] gi|300414173|gb|EFJ97483.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 115-1] Length = 251 Score = 118 bits (294), Expect = 9e-25, Method: Composition-based stats. Identities = 51/252 (20%), Positives = 83/252 (32%), Gaps = 16/252 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V ++ + V Sbjct: 1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G T LD AL+ D W A++S TR+G +V G L Sbjct: 59 ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQSADGSEGYTRNGSIQVDPTGQL--TIQ 116 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 +PV+ A + G T+ V + V+R + Sbjct: 117 GHPVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176 Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 GI L+ + V G LE SN N++ M MI ++F +I Sbjct: 177 GIFRLSAETQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236 Query: 230 NEKSMLEAIRNI 241 + + A + Sbjct: 237 VDDNAGRA-NQL 247 >gi|218549195|ref|YP_002382986.1| flagellar basal body rod protein FlgF [Escherichia fergusonii ATCC 35469] gi|218356736|emb|CAQ89364.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia fergusonii ATCC 35469] Length = 251 Score = 118 bits (294), Expect = 9e-25, Method: Composition-based stats. Identities = 51/252 (20%), Positives = 83/252 (32%), Gaps = 16/252 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V ++ + V Sbjct: 1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G T LD AL+ D W A+++ TR+G +V G L Sbjct: 59 ASTPGADMTPGKMDYTQRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPGGQL--TIQ 116 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 +PV+ A + G T+ V S V+R + Sbjct: 117 GHPVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGKLKLVKASDNEVQRGDD 176 Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 GI L+ + V G LE SN N++ M MI ++F +I Sbjct: 177 GIFRLSAESQATRGPVLQADPSLRVMSGVLEGSNVNAVSAMSDMIANARRFEMQMKVISS 236 Query: 230 NEKSMLEAIRNI 241 + + A + Sbjct: 237 VDDNEGRA-NQL 247 >gi|218700420|ref|YP_002408049.1| flagellar basal body rod protein FlgF [Escherichia coli IAI39] gi|300938642|ref|ZP_07153371.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 21-1] gi|218370406|emb|CAR18213.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli IAI39] gi|300456427|gb|EFK19920.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 21-1] Length = 251 Score = 118 bits (294), Expect = 9e-25, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 83/252 (32%), Gaps = 16/252 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V ++ + V Sbjct: 1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119 + G T LD AL+ D W A+++ TR+G +V G L Sbjct: 59 ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADSSEGYTRNGSIQVDPTGQL--TIQ 116 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 +PV+ A + G T+ V + V+R + Sbjct: 117 GHPVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176 Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 GI L+ + V G LE SN N++ M MI ++F +I Sbjct: 177 GIFRLSAESQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236 Query: 230 NEKSMLEAIRNI 241 + + A + Sbjct: 237 VDDNAGRA-NQL 247 >gi|15801194|ref|NP_287211.1| flagellar basal body rod protein FlgF [Escherichia coli O157:H7 EDL933] gi|15830709|ref|NP_309482.1| flagellar basal body rod protein FlgF [Escherichia coli O157:H7 str. Sakai] gi|168747147|ref|ZP_02772169.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7 str. EC4113] gi|168758630|ref|ZP_02783637.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7 str. EC4401] gi|168764489|ref|ZP_02789496.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7 str. EC4501] gi|168767736|ref|ZP_02792743.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7 str. EC4486] gi|168773922|ref|ZP_02798929.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7 str. EC4196] gi|168790012|ref|ZP_02815019.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7 str. EC869] gi|168802022|ref|ZP_02827029.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7 str. EC508] gi|195935467|ref|ZP_03080849.1| flagellar basal body rod protein FlgF [Escherichia coli O157:H7 str. EC4024] gi|208805942|ref|ZP_03248279.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7 str. EC4206] gi|208815658|ref|ZP_03256837.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7 str. EC4045] gi|208822437|ref|ZP_03262756.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7 str. EC4042] gi|209397223|ref|YP_002269923.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7 str. EC4115] gi|217328081|ref|ZP_03444163.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7 str. TW14588] gi|254792459|ref|YP_003077296.1| flagellar basal body rod protein FlgF [Escherichia coli O157:H7 str. TW14359] gi|261227018|ref|ZP_05941299.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli O157:H7 str. FRIK2000] gi|261256252|ref|ZP_05948785.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli O157:H7 str. FRIK966] gi|291282097|ref|YP_003498915.1| Flagellar basal-body rod protein FlgF [Escherichia coli O55:H7 str. CB9615] gi|12514615|gb|AAG55823.1|AE005317_12 flagellar biosynthesis, cell-proximal portion of basal-body rod [Escherichia coli O157:H7 str. EDL933] gi|13360919|dbj|BAB34878.1| flagellar rod protein flgF [Escherichia coli O157:H7 str. Sakai] gi|187770508|gb|EDU34352.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7 str. EC4196] gi|188018201|gb|EDU56323.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7 str. EC4113] gi|189354581|gb|EDU73000.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7 str. EC4401] gi|189363129|gb|EDU81548.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7 str. EC4486] gi|189365533|gb|EDU83949.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7 str. EC4501] gi|189370455|gb|EDU88871.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7 str. EC869] gi|189375940|gb|EDU94356.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7 str. EC508] gi|208725743|gb|EDZ75344.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7 str. EC4206] gi|208732306|gb|EDZ80994.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7 str. EC4045] gi|208737922|gb|EDZ85605.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7 str. EC4042] gi|209158623|gb|ACI36056.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7 str. EC4115] gi|209773368|gb|ACI84996.1| flagellar rod protein flgF [Escherichia coli] gi|209773370|gb|ACI84997.1| flagellar rod protein flgF [Escherichia coli] gi|209773372|gb|ACI84998.1| flagellar rod protein flgF [Escherichia coli] gi|209773374|gb|ACI84999.1| flagellar rod protein flgF [Escherichia coli] gi|209773376|gb|ACI85000.1| flagellar rod protein flgF [Escherichia coli] gi|217318508|gb|EEC26934.1| flagellar basal-body rod protein FlgF [Escherichia coli O157:H7 str. TW14588] gi|254591859|gb|ACT71220.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli O157:H7 str. TW14359] gi|290761970|gb|ADD55931.1| Flagellar basal-body rod protein FlgF [Escherichia coli O55:H7 str. CB9615] gi|320189760|gb|EFW64416.1| Flagellar basal-body rod protein FlgF [Escherichia coli O157:H7 str. EC1212] gi|320637528|gb|EFX07328.1| flagellar basal body rod protein FlgF [Escherichia coli O157:H7 str. G5101] gi|320643089|gb|EFX12290.1| flagellar basal body rod protein FlgF [Escherichia coli O157:H- str. 493-89] gi|320648547|gb|EFX17202.1| flagellar basal body rod protein FlgF [Escherichia coli O157:H- str. H 2687] gi|320653861|gb|EFX21935.1| flagellar basal body rod protein FlgF [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320659341|gb|EFX26910.1| flagellar basal body rod protein FlgF [Escherichia coli O55:H7 str. USDA 5905] gi|326339299|gb|EGD63113.1| Flagellar basal-body rod protein FlgF [Escherichia coli O157:H7 str. 1125] gi|326344740|gb|EGD68488.1| Flagellar basal-body rod protein FlgF [Escherichia coli O157:H7 str. 1044] Length = 251 Score = 118 bits (294), Expect = 9e-25, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 83/252 (32%), Gaps = 16/252 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V ++ + V Sbjct: 1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G T LD AL+ D W A+++ TR+G +V G L Sbjct: 59 ASTPGADITPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 +PV+ A + G T+ V + V+R + Sbjct: 117 GHPVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176 Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 GI L+ + V G LE SN N++ M MI ++F +I Sbjct: 177 GIFRLSAETQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236 Query: 230 NEKSMLEAIRNI 241 + + A + Sbjct: 237 VDDNAGRA-NQL 247 >gi|86157778|ref|YP_464563.1| flagellar basal body rod protein [Anaeromyxobacter dehalogenans 2CP-C] gi|85774289|gb|ABC81126.1| flagellar basal body rod protein [Anaeromyxobacter dehalogenans 2CP-C] Length = 235 Score = 118 bits (294), Expect = 9e-25, Method: Composition-based stats. Identities = 54/239 (22%), Positives = 88/239 (36%), Gaps = 11/239 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + +A ++L VADN++N T GF+ + F + Q + A Sbjct: 1 MADGIYVSMCGAVARAEQLDAVADNLANAQTPGFKAARPAFESFLAP---GAAQDKRYAA 57 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119 + + G TG LD E + A+ + TRDGR + D LVS Sbjct: 58 AVASGVDLRPGPTQRTGNALDVVPEAGLFLAVRTAGGATAYTRDGRLTLDADRRLVS--- 114 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 L A + D V G + +AT+GL +D R S ++P Sbjct: 115 DGRPLLSAQGEPIVLPPDLDARVDAAGRVWAGDVEVATLGLARLDGPVD--RVGPSLLAP 172 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 L S V+ G LE NA ++ Q++ + + + I + A+ Sbjct: 173 GAGGRALP--SEGAVRSGELELGNAGALEASIQLVAAQRAYEASLQAIQTYRQLDQRAV 229 >gi|110641253|ref|YP_668983.1| flagellar basal body rod protein FlgF [Escherichia coli 536] gi|191172387|ref|ZP_03033928.1| flagellar basal-body rod protein FlgF [Escherichia coli F11] gi|300982620|ref|ZP_07176204.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 200-1] gi|110342845|gb|ABG69082.1| flagellar basal-body rod protein FlgF [Escherichia coli 536] gi|190907271|gb|EDV66869.1| flagellar basal-body rod protein FlgF [Escherichia coli F11] gi|300307085|gb|EFJ61605.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 200-1] gi|324013351|gb|EGB82570.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 60-1] Length = 251 Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 49/252 (19%), Positives = 82/252 (32%), Gaps = 16/252 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V ++ + V Sbjct: 1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G T LD AL+ D W +++ TR+G +V G L Sbjct: 59 ASTPGADMTPGKMDYTSRPLDVALQQDGWLVVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 +PV+ A + G T+ V + V+R + Sbjct: 117 GHPVVGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176 Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 GI L+ + V G LE SN N++ M MI ++F +I Sbjct: 177 GIFRLSAESQARRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236 Query: 230 NEKSMLEAIRNI 241 + + A + Sbjct: 237 VDDNAGRA-NQL 247 >gi|193069514|ref|ZP_03050468.1| flagellar basal-body rod protein FlgF [Escherichia coli E110019] gi|192957262|gb|EDV87711.1| flagellar basal-body rod protein FlgF [Escherichia coli E110019] Length = 251 Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 83/252 (32%), Gaps = 16/252 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V ++ + V Sbjct: 1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G T LD AL+ D W A+++ TR+G +V G L Sbjct: 59 ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 +PV+ A + G T+ V + V+R + Sbjct: 117 GHPVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176 Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 GI L+ + V G LE SN N++ M MI ++F +I Sbjct: 177 GIFRLSAETQATRGPILQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236 Query: 230 NEKSMLEAIRNI 241 + + A + Sbjct: 237 VDDNAGRA-NQL 247 >gi|16129040|ref|NP_415595.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli str. K-12 substr. MG1655] gi|89107923|ref|AP_001703.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli str. K-12 substr. W3110] gi|110805094|ref|YP_688614.1| flagellar basal body rod protein FlgF [Shigella flexneri 5 str. 8401] gi|170080728|ref|YP_001730048.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli str. K-12 substr. DH10B] gi|188495735|ref|ZP_03003005.1| flagellar basal-body rod protein FlgF [Escherichia coli 53638] gi|194438118|ref|ZP_03070211.1| flagellar basal-body rod protein FlgF [Escherichia coli 101-1] gi|209918331|ref|YP_002292415.1| flagellar basal body rod protein FlgF [Escherichia coli SE11] gi|218694611|ref|YP_002402278.1| flagellar basal body rod protein FlgF [Escherichia coli 55989] gi|238900331|ref|YP_002926127.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli BW2952] gi|253773899|ref|YP_003036730.1| flagellar basal body rod protein FlgF [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254161183|ref|YP_003044291.1| flagellar basal body rod protein FlgF [Escherichia coli B str. REL606] gi|256023225|ref|ZP_05437090.1| flagellar basal body rod protein FlgF [Escherichia sp. 4_1_40B] gi|297517865|ref|ZP_06936251.1| flagellar basal body rod protein FlgF [Escherichia coli OP50] gi|300821142|ref|ZP_07101291.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 119-7] gi|300902468|ref|ZP_07120450.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 84-1] gi|300950172|ref|ZP_07164117.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 116-1] gi|301029708|ref|ZP_07192762.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 196-1] gi|301304984|ref|ZP_07211086.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 124-1] gi|301644989|ref|ZP_07244955.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 146-1] gi|307137712|ref|ZP_07497068.1| flagellar basal body rod protein FlgF [Escherichia coli H736] gi|331641621|ref|ZP_08342756.1| flagellar basal-body rod protein FlgF [Escherichia coli H736] gi|331667477|ref|ZP_08368341.1| flagellar basal-body rod protein FlgF [Escherichia coli TA271] gi|331676868|ref|ZP_08377564.1| flagellar basal-body rod protein FlgF [Escherichia coli H591] gi|2494531|sp|P75938|FLGF_ECOLI RecName: Full=Flagellar basal-body rod protein flgF; AltName: Full=Putative proximal rod protein gi|1787317|gb|AAC74161.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli str. K-12 substr. MG1655] gi|4062655|dbj|BAA35886.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli str. K12 substr. W3110] gi|110614642|gb|ABF03309.1| flagellar basal-body rod protein FlgF [Shigella flexneri 5 str. 8401] gi|169888563|gb|ACB02270.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli str. K-12 substr. DH10B] gi|188490934|gb|EDU66037.1| flagellar basal-body rod protein FlgF [Escherichia coli 53638] gi|194423054|gb|EDX39048.1| flagellar basal-body rod protein FlgF [Escherichia coli 101-1] gi|209911590|dbj|BAG76664.1| flagellar basal-body rod protein FlgF [Escherichia coli SE11] gi|218351343|emb|CAU97049.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli 55989] gi|238861103|gb|ACR63101.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli BW2952] gi|242376881|emb|CAQ31598.1| flagellar basal-body rod protein FlgF, subunit of Flagellar Motor Complex and Flagellum [Escherichia coli BL21(DE3)] gi|253324943|gb|ACT29545.1| flagellar basal-body rod protein FlgF [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253973084|gb|ACT38755.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli B str. REL606] gi|253977298|gb|ACT42968.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli BL21(DE3)] gi|260449783|gb|ACX40205.1| flagellar basal-body rod protein FlgF [Escherichia coli DH1] gi|299877396|gb|EFI85607.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 196-1] gi|300405500|gb|EFJ89038.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 84-1] gi|300450519|gb|EFK14139.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 116-1] gi|300526441|gb|EFK47510.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 119-7] gi|300839702|gb|EFK67462.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 124-1] gi|301076718|gb|EFK91524.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 146-1] gi|309701349|emb|CBJ00650.1| flagellar basal-body rod protein FlgF [Escherichia coli ETEC H10407] gi|315135709|dbj|BAJ42868.1| flagellar basal body rod protein FlgF [Escherichia coli DH1] gi|315253878|gb|EFU33846.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 85-1] gi|323937817|gb|EGB34081.1| flagellar basal-body rod protein FlgF [Escherichia coli E1520] gi|323942546|gb|EGB38713.1| flagellar basal-body rod protein FlgF [Escherichia coli E482] gi|323962676|gb|EGB58254.1| flagellar basal-body rod protein FlgF [Escherichia coli H489] gi|323973334|gb|EGB68523.1| flagellar basal-body rod protein FlgF [Escherichia coli TA007] gi|324017419|gb|EGB86638.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 117-3] gi|331038419|gb|EGI10639.1| flagellar basal-body rod protein FlgF [Escherichia coli H736] gi|331065062|gb|EGI36957.1| flagellar basal-body rod protein FlgF [Escherichia coli TA271] gi|331075557|gb|EGI46855.1| flagellar basal-body rod protein FlgF [Escherichia coli H591] gi|332342623|gb|AEE55957.1| flagellar basal-body rod protein FlgF [Escherichia coli UMNK88] Length = 251 Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 83/252 (32%), Gaps = 16/252 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V ++ + V Sbjct: 1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G T LD AL+ D W A+++ TR+G +V G L Sbjct: 59 ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 +PV+ A + G T+ V + V+R + Sbjct: 117 GHPVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176 Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 GI L+ + V G LE SN N++ M MI ++F +I Sbjct: 177 GIFRLSAETQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236 Query: 230 NEKSMLEAIRNI 241 + + A + Sbjct: 237 VDDNAGRA-NQL 247 >gi|323947621|gb|EGB43625.1| flagellar basal-body rod protein FlgF [Escherichia coli H120] Length = 251 Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 84/252 (33%), Gaps = 16/252 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V ++ + V Sbjct: 1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G T LD AL+ D W A+++ TR+G +V G L Sbjct: 59 ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 +PV+ A + G T+ V + V+R + Sbjct: 117 GHPVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176 Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 GI L+ ++V G LE SN N++ M MI ++F +I Sbjct: 177 GIFRLSAESQATRGPILQADPTLSVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236 Query: 230 NEKSMLEAIRNI 241 + + A + Sbjct: 237 VDDNAGRA-NQL 247 >gi|239828562|ref|YP_002951186.1| hypothetical protein GWCH70_3280 [Geobacillus sp. WCH70] gi|239808855|gb|ACS25920.1| protein of unknown function DUF1078 domain protein [Geobacillus sp. WCH70] Length = 283 Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 50/283 (17%), Positives = 100/283 (35%), Gaps = 41/283 (14%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S L Q+L +++N++N++T GF+ + F E++ ++ Sbjct: 1 MLRSMITAANTMAQLGQQLDVISNNIANSNTTGFKRRETNFGELLAQQFTNLPNDKATRL 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL------ESPRGIILTR 102 + + L G+ T LD AL + F + I TR Sbjct: 61 TPNGVRYGVGARLAETNLVLAQGALTKTDRALDVALAKEGQFFRVLVQGENGAQEIGYTR 120 Query: 103 DGRFK-----VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157 G F + ++ S +PVLD + PI +P+ + + G I+ Sbjct: 121 SGAFYLTPSAENPNELMLVTSDGHPVLDENNAPILLPEGFKNITISNNGTITAVASDGRV 180 Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----------------SGVTVKRGFLE 200 M ++ ++ + + NI P + + +++ +G LE Sbjct: 181 MRRANIGITTILRPQLLQSVGDNIFTLPDLNALNVNETDVAVNMTGNLRNQISMTQGALE 240 Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 SN + E+ M+ + + I +++ + I I S Sbjct: 241 QSNVDLGAELTDMMITERSYQLNARAISLSDQMLG-LINGIRS 282 >gi|218553655|ref|YP_002386568.1| flagellar basal body rod protein FlgF [Escherichia coli IAI1] gi|218360423|emb|CAQ97977.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli IAI1] Length = 251 Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 51/252 (20%), Positives = 84/252 (33%), Gaps = 16/252 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V ++ + V Sbjct: 1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G T LD AL+ D W A++S TR+G +V G L Sbjct: 59 ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQSADGSEGYTRNGSIQVDPTGQL--TIQ 116 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 +PV+ A + G + T+ V + V+R + Sbjct: 117 GHPVIGEAGPIAVPEGAEITIAADGTISALNPGDLANTVAPVGRLKLVKATGSEVQRGDD 176 Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 GI L+ + V G LE SN N++ M MI ++F +I Sbjct: 177 GIFRLSAESQATRGPILQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236 Query: 230 NEKSMLEAIRNI 241 + + A + Sbjct: 237 VDDNAGRA-NQL 247 >gi|320664476|gb|EFX31627.1| flagellar basal body rod protein FlgF [Escherichia coli O157:H7 str. LSU-61] Length = 251 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 82/252 (32%), Gaps = 16/252 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V ++ + V Sbjct: 1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G T LD AL+ D W A+++ TR+G +V G L Sbjct: 59 ASTPGADITPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 +PV+ A + G T+ V V+R + Sbjct: 117 GHPVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKARGSEVQRGDD 176 Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 GI L+ + V G LE SN N++ M MI ++F +I Sbjct: 177 GIFRLSAETQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236 Query: 230 NEKSMLEAIRNI 241 + + A + Sbjct: 237 VDDNAGRA-NQL 247 >gi|26247217|ref|NP_753257.1| flagellar basal body rod protein FlgF [Escherichia coli CFT073] gi|91210229|ref|YP_540215.1| flagellar basal body rod protein FlgF [Escherichia coli UTI89] gi|117623263|ref|YP_852176.1| flagellar basal body rod protein FlgF [Escherichia coli APEC O1] gi|227886565|ref|ZP_04004370.1| flagellar basal body rod protein FlgF [Escherichia coli 83972] gi|237706937|ref|ZP_04537418.1| flagellar basal-body rod protein flgF [Escherichia sp. 3_2_53FAA] gi|300974381|ref|ZP_07172593.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 45-1] gi|301051139|ref|ZP_07197969.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 185-1] gi|26107618|gb|AAN79817.1|AE016759_91 Flagellar basal-body rod protein flgF [Escherichia coli CFT073] gi|91071803|gb|ABE06684.1| flagellar basal-body rod protein FlgF [Escherichia coli UTI89] gi|115512387|gb|ABJ00462.1| flagellar basal-body rod protein FlgF [Escherichia coli APEC O1] gi|226898147|gb|EEH84406.1| flagellar basal-body rod protein flgF [Escherichia sp. 3_2_53FAA] gi|227836769|gb|EEJ47235.1| flagellar basal body rod protein FlgF [Escherichia coli 83972] gi|294491134|gb|ADE89890.1| flagellar basal-body rod protein FlgF [Escherichia coli IHE3034] gi|300297160|gb|EFJ53545.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 185-1] gi|300410624|gb|EFJ94162.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 45-1] gi|307553079|gb|ADN45854.1| flagellar basal-body rod protein FlgF [Escherichia coli ABU 83972] gi|307627453|gb|ADN71757.1| flagellar basal body rod protein FlgF [Escherichia coli UM146] gi|315287368|gb|EFU46779.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 110-3] gi|315291071|gb|EFU50434.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 153-1] gi|320196441|gb|EFW71064.1| Flagellar basal-body rod protein FlgF [Escherichia coli WV_060327] gi|323953237|gb|EGB49103.1| flagellar basal-body rod protein FlgF [Escherichia coli H252] gi|323957901|gb|EGB53613.1| flagellar basal-body rod protein FlgF [Escherichia coli H263] Length = 251 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 83/252 (32%), Gaps = 16/252 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V ++ + V Sbjct: 1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G T LD AL+ D W A+++ TR+G +V G L Sbjct: 59 ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 +PV+ A + G T+ V + V+R + Sbjct: 117 GHPVVGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176 Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 GI L+ + V G LE SN N++ M MI ++F +I Sbjct: 177 GIFRLSAESQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236 Query: 230 NEKSMLEAIRNI 241 + + A + Sbjct: 237 VDDNAGRA-NQL 247 >gi|22127326|ref|NP_670749.1| flagellar basal body rod protein FlgF [Yersinia pestis KIM 10] gi|45442797|ref|NP_994336.1| flagellar basal body rod protein FlgF [Yersinia pestis biovar Microtus str. 91001] gi|108809054|ref|YP_652970.1| flagellar basal body rod protein FlgF [Yersinia pestis Antiqua] gi|108810749|ref|YP_646516.1| flagellar basal body rod protein FlgF [Yersinia pestis Nepal516] gi|145597818|ref|YP_001161894.1| flagellar basal body rod protein FlgF [Yersinia pestis Pestoides F] gi|166212093|ref|ZP_02238128.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar Antiqua str. B42003004] gi|167399157|ref|ZP_02304681.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167425211|ref|ZP_02316964.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229837409|ref|ZP_04457572.1| Flagellar basal-body rod protein flgF [Yersinia pestis Pestoides A] gi|229900946|ref|ZP_04516070.1| Flagellar basal-body rod protein flgF [Yersinia pestis Nepal516] gi|21960407|gb|AAM87000.1|AE013948_8 putative flagellar rod protein [Yersinia pestis KIM 10] gi|45437663|gb|AAS63213.1| putative flagellar rod protein [Yersinia pestis biovar Microtus str. 91001] gi|108774397|gb|ABG16916.1| hypothetical protein YPN_0584 [Yersinia pestis Nepal516] gi|108780967|gb|ABG15025.1| hypothetical protein YPA_3063 [Yersinia pestis Antiqua] gi|145209514|gb|ABP38921.1| hypothetical protein YPDSF_0510 [Yersinia pestis Pestoides F] gi|166206839|gb|EDR51319.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar Antiqua str. B42003004] gi|167051661|gb|EDR63069.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167055974|gb|EDR65755.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229682285|gb|EEO78377.1| Flagellar basal-body rod protein flgF [Yersinia pestis Nepal516] gi|229705532|gb|EEO91542.1| Flagellar basal-body rod protein flgF [Yersinia pestis Pestoides A] gi|320016710|gb|ADW00282.1| Flagellar basal-body rod protein flgF [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 243 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 50/244 (20%), Positives = 93/244 (38%), Gaps = 8/244 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M ++ + A+N++N++T GFR + V Sbjct: 1 MDKLLYTAVSGANRSLSQQQIHANNLANSNTQGFRADLE--KATATQVMGGGYSSRVAVL 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 S + S TG +LD AL+ A+ S TR+G+ V+ +G ++ +G Sbjct: 59 SQNAGVDMTPASLQETGRDLDIALKNQGLIAVLSGGREAYTRNGQMDVSAEG-ALTINGL 117 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSGI 177 + D + + I + G I Q G + + VD+ +R+ N G+ Sbjct: 118 PVLGDGGPIVLPPYSALSIADDGTIAIIPQAGGIKTPEEIERIKLVDIPANQLRKNNRGL 177 Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + P V V LE SN +++ EM I L+++F + ++ E + +A Sbjct: 178 LVSNRG-PAARDETVQVVNKHLESSNVSAISEMIASISLSRQFEAQIKMMKVAED-LAQA 235 Query: 238 IRNI 241 + Sbjct: 236 GNRM 239 >gi|315296708|gb|EFU56003.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 16-3] Length = 251 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 83/252 (32%), Gaps = 16/252 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V ++ + V Sbjct: 1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G T LD AL+ D W A+++ TR+G +V G L Sbjct: 59 ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 +PV+ A + G T+ V + V+R + Sbjct: 117 GHPVVGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176 Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 GI L+ + V G LE SN N++ M MI ++F +I Sbjct: 177 GIFRLSAESQARRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236 Query: 230 NEKSMLEAIRNI 241 + + A + Sbjct: 237 VDDNAGRA-NQL 247 >gi|158321570|ref|YP_001514077.1| flagellar basal body rod protein [Alkaliphilus oremlandii OhILAs] gi|158141769|gb|ABW20081.1| flagellar basal body rod protein [Alkaliphilus oremlandii OhILAs] Length = 357 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 41/197 (20%), Positives = 91/197 (46%), Gaps = 4/197 (2%) Query: 46 GAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGR 105 ++ I + +++ G+ TG+ L+FA++G +F +++P G + TR+G Sbjct: 163 RPAQDVIGTINGGKRFERTHVNFLQGTLEETGSPLNFAIDGTGFFRVQTPEGPMYTRNGS 222 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 F + +G+LV+A G + I ++ F V E G++ G+++ + + + Sbjct: 223 FSLGPNGNLVTAEGYLLL----GQNGPINVGNQEFQVKENGQVIVAGQLVNQISMTDISN 278 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225 + S E V +GFLE SN +++ EM +MI + + + + Sbjct: 279 LNSLDKFGQSYYIVREGLEVEETPFTGEVLQGFLEGSNISTIDEMVKMISTMRSYEASSK 338 Query: 226 LIDENEKSMLEAIRNIA 242 ++ ++ + +A+ +I Sbjct: 339 MVKAYDEMLQKAVNDIG 355 Score = 82.2 bits (201), Expect = 6e-14, Method: Composition-based stats. Identities = 34/204 (16%), Positives = 63/204 (30%), Gaps = 17/204 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDIDQKIS 57 M +++ ++ L ++NM+N +T GF+ + F EV+ N Sbjct: 1 MFRGLYTAVSSMQTNQRMLDITSNNMANVNTTGFKKDVLVAETFPEVLIKKING------ 54 Query: 58 FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSA 117 + + I E +F +E P G +RD +F V +DG L + Sbjct: 55 --EIPNQTIKLNGNLDIDRDGEGYILSTERGFFTVEGPMGKSYSRDLKFTVDEDGYLRTY 112 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ-GFVRRENSG 176 + G + + I G + + R Sbjct: 113 GR-----TSGGEIDWTEGNFVLSGQGTRIRVDNNNVQIDQRGRITAGGGAMDLIHRPAQD 167 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLE 200 + I + + V +G LE Sbjct: 168 VIGTINGGKRFERTHVNFLQGTLE 191 >gi|323976550|gb|EGB71638.1| flagellar basal-body rod protein FlgF [Escherichia coli TW10509] Length = 251 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 83/252 (32%), Gaps = 16/252 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V ++ + V Sbjct: 1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G T LD AL+ D W A+++ TR+G +V G L Sbjct: 59 ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTDDGSEGYTRNGSIQVDPTGQL--TIQ 116 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 +PV+ A + G T+ V + V+R + Sbjct: 117 GHPVIGEAGPIAVPEGAEITVAADGTISALNSGDPANTVAPVGRLKLVKATGSEVQRGDD 176 Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 GI L+ + V G LE SN N++ M MI ++F +I Sbjct: 177 GIFRLSAESQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236 Query: 230 NEKSMLEAIRNI 241 + + A + Sbjct: 237 VDDNAGRA-NQL 247 >gi|187932642|ref|YP_001885066.1| flagellar basal body rod protein FlgG [Clostridium botulinum B str. Eklund 17B] gi|187720795|gb|ACD22016.1| flagellar hook-basal body complex protein [Clostridium botulinum B str. Eklund 17B] Length = 257 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 49/256 (19%), Positives = 99/256 (38%), Gaps = 14/256 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVV----------GA 47 M F ++ + LE TV +N+ N + G++ + F +V+ Sbjct: 1 MIRGFYTAVSGLITLENEQQTVTNNIVNVNNNGYKKNTLTKQSFEDVMITNRQNKVGNRH 60 Query: 48 IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107 I N + V G+F ST + DF ++G +F ++ + TR G FK Sbjct: 61 IPNKLGNLNLGVKVNDVSTIYTQGAFKSTDSNTDFGIDGRGFFTVQRGNERLFTRSGDFK 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 + G L++ +G Y + + + P G + + + Sbjct: 121 IDQQGYLITGNGDYVLGRNNATGAEEPIYVGKDEFSLDGNNNLQSAAGESTHTLLTADFT 180 Query: 168 GFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 + E G + P+ + V V++G LE SN N E+ +++ + ++F + + Sbjct: 181 EYAPLEKVGDNYYKGDNPV-YNAVVNVRQGVLETSNVNPTEELVKLMEIKRQFETNQKFV 239 Query: 228 DENEKSMLEAIRNIAS 243 ++++ +A I S Sbjct: 240 SMQDETVQKAANEIGS 255 >gi|322435953|ref|YP_004218165.1| flagellar hook-basal body protein [Acidobacterium sp. MP5ACTX9] gi|321163680|gb|ADW69385.1| flagellar hook-basal body protein [Acidobacterium sp. MP5ACTX9] Length = 251 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 49/248 (19%), Positives = 96/248 (38%), Gaps = 10/248 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + LA Q L T A+N++N T GFR + FS V+ + Q Sbjct: 1 MDSGLYAAYTGLLARTQALDTAANNLANASTNGFRAQRDSFSGVLASGLAAGQQGSQVGV 60 Query: 61 SGKEYL-------SKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113 Y + G ++T LD A+ G +FA+ + G+ TRDG F ++ G Sbjct: 61 GINSYGVLGGSSADQSQGPMVTTSNPLDVAINGTGFFAIRTAHGVRYTRDGAFTLSAQGQ 120 Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK-VIATMGLYSVDMSQGFVRR 172 L + +G+ + + + +I G + G V+ +G++ + G + Sbjct: 121 LQTGAGEPVLNTAMAPITLPSGEVQISGDGTVAVQTAAGSGVVGQLGIFDFASTAGLTQE 180 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 + P + VK+G +E +N +S++ Q++ + ++ + + Sbjct: 181 GANRFKAPDDAVPTASTAM--VKQGAVEGANQDSVHGTMQLVLIQRQAEMMQKALSVFNA 238 Query: 233 SMLEAIRN 240 + Sbjct: 239 DFDKTATE 246 >gi|191168482|ref|ZP_03030270.1| flagellar basal-body rod protein FlgF [Escherichia coli B7A] gi|190901501|gb|EDV61262.1| flagellar basal-body rod protein FlgF [Escherichia coli B7A] Length = 251 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 83/252 (32%), Gaps = 16/252 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V ++ + V Sbjct: 1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G T LD AL+ D W A+++ TR+G +V G L Sbjct: 59 ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 +PV+ A + G T+ V + V+R + Sbjct: 117 GHPVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176 Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 GI L+ + V G LE SN N++ M MI ++F +I Sbjct: 177 GIFRLSAESQATRGPILQADPTLRVMPGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236 Query: 230 NEKSMLEAIRNI 241 + + A + Sbjct: 237 VDDNAGRA-NQL 247 >gi|328958264|ref|YP_004375650.1| putative flagellar basal-body rod protein [Carnobacterium sp. 17-4] gi|328674588|gb|AEB30634.1| putative flagellar basal-body rod protein [Carnobacterium sp. 17-4] Length = 252 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 47/256 (18%), Positives = 104/256 (40%), Gaps = 20/256 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV------------VGAI 48 M S L+++ ++ N++N +T G+++ ++ S Sbjct: 1 MIRSLTTLNNNFNILQKKQENISANVANINTSGYKSQEIIQSTRASEVMSNHLDGPFLNQ 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFK 107 + DI + + G +T + D A++GD +F +E+P G TR+G F Sbjct: 61 QQDIGDFTFGNQIDEIAQNFSQGGLKATASPTDIAIQGDGFFTVEAPNGGNYYTRNGNFA 120 Query: 108 VTDDGSLVSASGKYPVLDMAS-VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 V D G LV+ G + A I F++ +G IS G + + + Sbjct: 121 VNDTGELVTQEGYRVLGTTAGGQSSPIQVNGTEFSIDNRGNISGTGMSLMVTE---FEDT 177 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 G R ++ + G +++ +LE SN ++ E+ ++ ++++F + Sbjct: 178 AGLTRTGDTLF---TGQGGTVQIGGTVMQQSYLEASNVQTVDEITNLMQVSREFEANQKA 234 Query: 227 IDENEKSMLEAIRNIA 242 + ++++ +A+ + Sbjct: 235 LSAADETLRKAVNEVG 250 >gi|215486286|ref|YP_002328717.1| flagellar basal body rod protein FlgF [Escherichia coli O127:H6 str. E2348/69] gi|306814074|ref|ZP_07448247.1| flagellar basal body rod protein FlgF [Escherichia coli NC101] gi|312968849|ref|ZP_07783056.1| flagellar basal-body rod protein FlgF [Escherichia coli 2362-75] gi|331657139|ref|ZP_08358101.1| flagellar basal-body rod protein FlgF [Escherichia coli TA206] gi|215264358|emb|CAS08715.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli O127:H6 str. E2348/69] gi|305852711|gb|EFM53159.1| flagellar basal body rod protein FlgF [Escherichia coli NC101] gi|312286251|gb|EFR14164.1| flagellar basal-body rod protein FlgF [Escherichia coli 2362-75] gi|331055387|gb|EGI27396.1| flagellar basal-body rod protein FlgF [Escherichia coli TA206] Length = 251 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 49/252 (19%), Positives = 82/252 (32%), Gaps = 16/252 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V ++ + V Sbjct: 1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G T LD AL+ D W A+++ TR+G +V G L Sbjct: 59 ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 +PV+ A + G T+ V + V+R + Sbjct: 117 GHPVVGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176 Query: 176 GISPNIPPTPLEDLS------GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 GI + + V G LE SN N++ M MI ++F +I Sbjct: 177 GIFRLSAESQATRGPVLLADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236 Query: 230 NEKSMLEAIRNI 241 + + A + Sbjct: 237 VDDNAGRA-NQL 247 >gi|330808196|ref|YP_004352658.1| flagellar basal-body rod protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327376304|gb|AEA67654.1| flagellar basal-body rod protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 245 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 47/246 (19%), Positives = 93/246 (37%), Gaps = 9/246 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A+N++N T GF+ + + + D +F Sbjct: 1 MDKYLYVAMTGASQNALAQRAHANNLANISTNGFQKDLEQARSM--PVFGDSFPARAFAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119 S + G+ + TG +LD A+ G W A+++P G R G V G L + +G Sbjct: 59 SERPATDFTPGALVETGRDLDVAVSGPGWMAVQNPDGGESYVRTGSLNVDALGVLRAGNG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQ---KGKVIATMGLYSVDMSQGFVRRENSG 176 + + + + QK EI G + + + V+ + + G Sbjct: 119 MPVMGNGGPIAVPPEQKIEIGQDGTISIRAMGEGPRVMAEVDRIKLVNPDLKNMTKGLDG 178 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN---EKS 233 P + V + GF E SN N++ EM ++ L ++F +++ +++ Sbjct: 179 SIRTKDGQPAPIDANVQLVSGFQEASNVNAVDEMTSVLALAKQFELHVKMMNTAKEGDEA 238 Query: 234 MLEAIR 239 M ++ Sbjct: 239 MARVLQ 244 >gi|323174794|gb|EFZ60409.1| flagellar basal-body rod protein FlgF [Escherichia coli LT-68] Length = 251 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 83/252 (32%), Gaps = 16/252 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V ++ + V Sbjct: 1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G T LD AL+ D W A+++ TR+G +V G L Sbjct: 59 ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 +PV+ A + G T+ V + V+R + Sbjct: 117 GHPVIGEAGPIAMPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176 Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 GI L+ + V G LE SN N++ M MI ++F +I Sbjct: 177 GIFRLSAETQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236 Query: 230 NEKSMLEAIRNI 241 + + A + Sbjct: 237 VDDNAGRA-NQL 247 >gi|187926953|ref|YP_001893298.1| flagellar basal-body rod protein FlgF [Ralstonia pickettii 12J] gi|241665282|ref|YP_002983641.1| flagellar basal-body rod protein FlgF [Ralstonia pickettii 12D] gi|187728707|gb|ACD29871.1| flagellar basal-body rod protein FlgF [Ralstonia pickettii 12J] gi|240867309|gb|ACS64969.1| flagellar basal-body rod protein FlgF [Ralstonia pickettii 12D] Length = 245 Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 50/244 (20%), Positives = 94/244 (38%), Gaps = 6/244 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M S + + L + + A+N++N T GF+ F V ++ D SFV Sbjct: 1 MDRSIYVSMTGVKHLFDQQAASANNLANASTTGFKAQIDAFHTV--GVQGDGSPTRSFVM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G +TG LD A++G +FA+++P TR G F++ DG++V+ SG Sbjct: 59 ASAIGTDVTPGPIETTGRALDVAIDGQGYFAVQAPDGTEAYTRAGTFQLNPDGTIVTLSG 118 Query: 120 KYPVLDMASV--PIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177 + + D + P + ++ L V + + R G+ Sbjct: 119 QPVMGDGGPITLPPNTTVQFAKDGTVNAISADNVTPPVSLGRLKLVSIDPSNLDRGTDGL 178 Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + V + G LE SN N + MI ++++ + ++ + A Sbjct: 179 FRQRDGQDADVNENVRITPGALEGSNVNLTDSLVNMIEISRQLEMQMKSLQTSDTNAQSA 238 Query: 238 IRNI 241 + Sbjct: 239 -NEL 241 >gi|307721136|ref|YP_003892276.1| flagellar hook-basal body protein [Sulfurimonas autotrophica DSM 16294] gi|306979229|gb|ADN09264.1| flagellar hook-basal body protein [Sulfurimonas autotrophica DSM 16294] Length = 273 Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 56/270 (20%), Positives = 103/270 (38%), Gaps = 28/270 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 MQT + A + RL T+A+N++N +T GF+ ++ + + K D Sbjct: 1 MQTGYYSSAAGMVTQFNRLDTIANNLANVNTNGFKEDQLIVGDFMRLYKEARDELSNANN 60 Query: 54 ----------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDA-WFALESPRGIILTR 102 Y + VG+ + LDFAL + +FA+++P G+ LTR Sbjct: 61 SKAGAAFLNRTMTRAPQIVDSYTNYSVGNMQKSSNSLDFALSQEGLFFAVKTPEGVRLTR 120 Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQ---------IPQKDEIFNVGEKGEISQKGK 153 DG F + D+G L++ G + + I + D+ + S Sbjct: 121 DGAFTLNDEGKLITKQGYEVLPSDYQNSQEGISFATTDSIIEVDKNGQILTNVPNSASLV 180 Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQM 213 + + + + V+ ++ + V++GF+E SN N++ M Q+ Sbjct: 181 QNKKLFIAQPESLKDLVKEGDNLYKLADINSLKSIEQSGAVRQGFVEKSNVNAVKMMTQL 240 Query: 214 IHLTQKFNSITTLIDEN-EKSMLEAIRNIA 242 I + +D +AI IA Sbjct: 241 IETNRLVGMYQKAMDTQMNDMNKDAIEKIA 270 >gi|284007174|emb|CBA72458.1| flagellar basal body rod protein FlgF [Arsenophonus nasoniae] Length = 248 Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 42/247 (17%), Positives = 77/247 (31%), Gaps = 6/247 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + S + +N++N T GF+ S V + Q + Sbjct: 1 MDHVIYTAMNGARHALETQSVITNNLANVSTNGFKAQLAA-SRFVPIEGSVGHQTRTLTI 59 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSA-- 117 + + G+ T LD L + A++ + TR+G +++ +G L+ Sbjct: 60 ASTPGTDQRAGAMNYTARSLDVTLSDGGYLAVQLADGREAYTRNGNIQISANGELMIQNR 119 Query: 118 --SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 G + + +D I + + + Q E Sbjct: 120 PLMGDGGEIMVPPQAQLTIAEDGIITGYIPTAPPTQLGQVGQIKRVKPSAQQLVRGEEGL 179 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 PL + V + G LE SN N M MI + F +I + Sbjct: 180 FHLAEPNAQPLVMDNSVKLLSGVLEGSNVNPAQAMVDMIANARTFEMQMKVIHSANDNAQ 239 Query: 236 EAIRNIA 242 A + +A Sbjct: 240 RANQLLA 246 >gi|28900123|ref|NP_799778.1| putative flagellar basal-body rod protein [Vibrio parahaemolyticus RIMD 2210633] gi|153837106|ref|ZP_01989773.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus AQ3810] gi|260365773|ref|ZP_05778269.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus K5030] gi|260880695|ref|ZP_05893050.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus AN-5034] gi|260897699|ref|ZP_05906195.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus Peru-466] gi|260899390|ref|ZP_05907785.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus AQ4037] gi|28808406|dbj|BAC61611.1| putative flagellar basal-body rod protein [Vibrio parahaemolyticus RIMD 2210633] gi|149749694|gb|EDM60439.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus AQ3810] gi|308086220|gb|EFO35915.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus Peru-466] gi|308092603|gb|EFO42298.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus AN-5034] gi|308109250|gb|EFO46790.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus AQ4037] gi|308115048|gb|EFO52588.1| flagellar basal-body rod protein FlgF [Vibrio parahaemolyticus K5030] Length = 243 Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 42/242 (17%), Positives = 91/242 (37%), Gaps = 4/242 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + + ++N+SN DT GFR + V ++ + V Sbjct: 1 MDSLLFTATSGASRVLKAQHVRSNNLSNADTAGFRADMERVRSV--ELQGPGFDGRTMVV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + G + TG LD A+ G+ + A+E+P TR G ++ G++ Sbjct: 59 TNSASTRFDSGDVVKTGRALDVAVMGEGYLAVETPAGNEAYTRAGNIQIDTFGAMSINGF 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 + V + + G IA L V +++E+ + Sbjct: 119 PVVGENGPLVVPDYQKIEISERGLVSVIPPGGGAEIAVGTLKLVKPEINQLQKESDSLLH 178 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 ++ P V + +E SN +++ E+ ++ LT+ F ++ +++ +A Sbjct: 179 SVDGVPFAADETVQLAPEHIEGSNVSAIDELIGVMSLTRNFEMQVRMMKTA-ETLAQAGN 237 Query: 240 NI 241 + Sbjct: 238 KL 239 >gi|300716219|ref|YP_003741022.1| flagellar basal-body rod protein [Erwinia billingiae Eb661] gi|299062055|emb|CAX59171.1| Flagellar basal-body rod protein [Erwinia billingiae Eb661] Length = 251 Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 45/251 (17%), Positives = 86/251 (34%), Gaps = 14/251 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A ++ + A N++N T GFR V ++ + V Sbjct: 1 MDHAIYTAMGAASQTLEQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + GS T LD A+ D W ++ +P TR+G ++ G ++ G Sbjct: 59 ASTPGADTSQGSLDYTERPLDVAVREDGWLSVRAPDGTEAYTRNGNMELNPAG-QLTIQG 117 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI-- 177 + D + + + I G ++ AT+ L + + + G Sbjct: 118 NLVMGDGGPIAVPQGSEVTIAADGSITALNPGDPPNATVQLGRLKLVKAVGSEVTRGDDG 177 Query: 178 -------SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + L+ + V G LE SN + M MI ++F +I Sbjct: 178 LFRLTATAQAQRGAVLQTDPTIQVMPGVLEGSNVKPVETMVDMIANARRFEMQMKVISSV 237 Query: 231 EKSMLEAIRNI 241 +++ A + Sbjct: 238 DENEQRA-NQL 247 >gi|323490137|ref|ZP_08095357.1| flagellar hook-basal body protein [Planococcus donghaensis MPA1U2] gi|323396185|gb|EGA89011.1| flagellar hook-basal body protein [Planococcus donghaensis MPA1U2] Length = 280 Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 50/280 (17%), Positives = 101/280 (36%), Gaps = 41/280 (14%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV--------------G 46 M N L+++L + +N++N +T G++ + FS+ + G Sbjct: 1 MNIQMNTASNTMSELQKKLDLIGNNIANVNTNGYKRQEASFSDALVLSLEKQVGQKNEVG 60 Query: 47 AIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA-WFALESPRGIILTRDGR 105 I + + + + + + GS TG LDF ++G++ +F + S + T+DG Sbjct: 61 RITPNGLRIGAGAILSQTAVRNDQGSIKETGRPLDFMVQGESAYFRIASDGETLYTKDGS 120 Query: 106 FKVTDDGS-----LVSASGKYPVLDMASVP-------------------IQIPQKDEIFN 141 F+V + LV+A+G + + Sbjct: 121 FQVQPILNSTQVGLVTANGDAVLGADNQPIVFDADFENIRLNGQGTLEISYKDSDKQPTE 180 Query: 142 VGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLED 201 + + +A +G ++ + +G I + D + +K+ FLE Sbjct: 181 IQMGVAQINRQDSLAKIGENRFRLNGTEAEQLANGNLQFIDLSQPNDGAI-QIKQNFLEM 239 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 SN + EM ++I + F S I + M + I Sbjct: 240 SNVDLSDEMTELITTQRLFQSQGRAISYADDMMG-LVNTI 278 >gi|156934439|ref|YP_001438355.1| flagellar basal body rod protein FlgF [Cronobacter sakazakii ATCC BAA-894] gi|156532693|gb|ABU77519.1| hypothetical protein ESA_02270 [Cronobacter sakazakii ATCC BAA-894] Length = 252 Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 49/253 (19%), Positives = 85/253 (33%), Gaps = 17/253 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + S A N++N T GFR V ++ + V Sbjct: 1 MDHAIYTAMGAASQTLNQQSVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEG-DAWFALESPR-GIILTRDGRFKVTD------DG 112 + ++ GS T LD A++G D W A+++P TR+G + T G Sbjct: 59 ASTPGVNMSQGSLDYTSRPLDVAIQGSDGWLAVQAPDGTEAYTRNGNIQRTATGQLTIQG 118 Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG----KVIATMGLYSVDMSQG 168 + V G V+ + + K++ V G Sbjct: 119 NPVMGEGGPVVVPEGAEVTIAADGTISVLNPGDAPNTIAPVGRLKMVKASAKEVVRGDDG 178 Query: 169 FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228 R + + L+ VT+ G LE SN + M MI ++F +I Sbjct: 179 LFRL--NQQAQTARGATLQADPTVTLMSGVLEGSNVKPVEAMTDMIANARRFEMQMKIIT 236 Query: 229 ENEKSMLEAIRNI 241 +++ A + Sbjct: 237 SVDENEQRA-NQL 248 >gi|218557959|ref|YP_002390872.1| flagellar basal body rod protein FlgF [Escherichia coli S88] gi|218364728|emb|CAR02418.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli S88] Length = 251 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 82/252 (32%), Gaps = 16/252 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V ++ + V Sbjct: 1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G T LD AL+ D W A+++ TR+G +V G L Sbjct: 59 ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 +PV+ A + G T+ V + V+R + Sbjct: 117 GHPVVGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176 Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 GI L+ + V G LE SN N++ M MI + F +I Sbjct: 177 GIFRLSAESQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARCFEMQMKVISS 236 Query: 230 NEKSMLEAIRNI 241 + + A + Sbjct: 237 VDDNAGRA-NQL 247 >gi|310816830|ref|YP_003964794.1| flagellar basal-body rod protein FlgF, putative [Ketogulonicigenium vulgare Y25] gi|308755565|gb|ADO43494.1| flagellar basal-body rod protein FlgF, putative [Ketogulonicigenium vulgare Y25] Length = 237 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 66/239 (27%), Positives = 112/239 (46%), Gaps = 6/239 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + L Q L + +A+N++N +T G+R V FSE V + A Sbjct: 1 MDNTGYASLTRQTGLLHEMRAIANNIANANTTGYRAEGVAFSEYVVRLGPQSQSLSLATA 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 ++ G +TG D A+EG+ +F ++ P G +LTR G F + DG L+SA G Sbjct: 61 RVRQT-DFSQGDIGATGASFDLAIEGEGFFMIDHPEGPMLTRAGAFTLGPDGVLLSADGY 119 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 P+LD P+ IP + +G G IS G VI +GL++ R +G + Sbjct: 120 -PLLDAGEAPVMIPAEAGPVLIGADGTISAGGDVIGQIGLFTPTDPLSVTRTSGTGFFSD 178 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 LE +++G LE SN N++ ++ +MI + + + +L D ++ + ++ Sbjct: 179 DNMPYLE----GQIRQGHLEGSNVNAIAQIARMIEVQRAYEFGQSLADREDERIRSTVQ 233 >gi|324007917|gb|EGB77136.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 57-2] Length = 251 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 83/252 (32%), Gaps = 16/252 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V ++ + V Sbjct: 1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G T LD AL+ D W A+++ TR+G +V G L Sbjct: 59 ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 +PV+ A + G T+ L V + V+R + Sbjct: 117 GHPVVGEAGPIAVPEGAEITIAADGTISALNPGDPANTVALVGRLKLVKATGSEVQRGDD 176 Query: 176 GISPNIPPTPLEDLS------GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 GI + + V G LE SN N++ M MI ++F +I Sbjct: 177 GIFRLSAESQATRGPVLLADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236 Query: 230 NEKSMLEAIRNI 241 + + A + Sbjct: 237 VDDNAGRA-NQL 247 >gi|328470102|gb|EGF41013.1| putative flagellar basal-body rod protein [Vibrio parahaemolyticus 10329] Length = 243 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 41/242 (16%), Positives = 90/242 (37%), Gaps = 4/242 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + + ++N+SN DT GFR + V ++ + V Sbjct: 1 MDSLLFTATSGASRVLKAQHVRSNNLSNADTAGFRADMERVRSV--ELQGPGFDGRTMVV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + + TG LD A+ G+ + A+E+P TR G ++ G++ Sbjct: 59 TNSASTRFDSADVVKTGRALDVAVMGEGYLAVETPAGNEAYTRAGNIQIDTFGAMSINGF 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 + V + + G IA L V +++E+ + Sbjct: 119 PVVGENGPLVVPDYQKIEISERGLVSVIPPGGGAEIAVGTLKLVKPEINQLQKESDSLLH 178 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 ++ P V + +E SN +++ E+ ++ LT+ F ++ +++ +A Sbjct: 179 SVDGVPFAADETVQLAPEHIEGSNVSAIDELIGVMSLTRNFEMQVRMMKTA-ETLAQAGN 237 Query: 240 NI 241 + Sbjct: 238 KL 239 >gi|293409443|ref|ZP_06653019.1| flagellar basal-body rod protein FlgF [Escherichia coli B354] gi|291469911|gb|EFF12395.1| flagellar basal-body rod protein FlgF [Escherichia coli B354] Length = 251 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 49/252 (19%), Positives = 83/252 (32%), Gaps = 16/252 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V ++ + V Sbjct: 1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G T +D AL+ D W A+++ TR+G +V G L Sbjct: 59 ASTPGADMTPGKMDYTSRPMDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 +PV+ A + G T+ V + V+R + Sbjct: 117 GHPVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176 Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 GI L+ + V G LE SN N++ M MI ++F +I Sbjct: 177 GIFRLSAESQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236 Query: 230 NEKSMLEAIRNI 241 + + A + Sbjct: 237 VDDNAGRA-NQL 247 >gi|162421354|ref|YP_001604846.1| flagellar basal body rod protein FlgF [Yersinia pestis Angola] gi|162354169|gb|ABX88117.1| flagellar basal-body rod protein FlgF [Yersinia pestis Angola] Length = 243 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 49/247 (19%), Positives = 86/247 (34%), Gaps = 14/247 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M ++ + A+N++N++T GFR + V Sbjct: 1 MDKLLYTAVSGANRSLSQQQIHANNLANSNTQGFRADLE--KATATQVMGGGYSSRVAVL 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTD------DGSL 114 S + S TG +LD AL+ A+ S TR+G+ V+ +G Sbjct: 59 SQNAGVDMTPASLQETGRDLDIALKNQGLIAVLSGGREAYTRNGQMDVSAEGALTINGLP 118 Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174 V G VL S G + + + VD+ +R+ N Sbjct: 119 VLGDGGPIVLPPYSALSIADDGTIAIIPQAGGSKTPEEI----ERIKLVDIPANQLRKNN 174 Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 G+ + P V V LE SN +++ EM I L+++F + ++ E + Sbjct: 175 RGLLVSNRG-PAARDETVQVVNKHLESSNVSAISEMIASISLSRQFEAQIKMMKVAED-L 232 Query: 235 LEAIRNI 241 +A + Sbjct: 233 AQAGNRM 239 >gi|82544457|ref|YP_408404.1| flagellar basal body rod protein FlgF [Shigella boydii Sb227] gi|187731130|ref|YP_001880751.1| flagellar basal body rod protein FlgF [Shigella boydii CDC 3083-94] gi|81245868|gb|ABB66576.1| cell-proximal portion of basal-body rod [Shigella boydii Sb227] gi|187428122|gb|ACD07396.1| flagellar basal-body rod protein FlgF [Shigella boydii CDC 3083-94] gi|320186976|gb|EFW61689.1| Flagellar basal-body rod protein FlgF [Shigella flexneri CDC 796-83] gi|332094101|gb|EGI99153.1| flagellar basal-body rod protein FlgF [Shigella boydii 3594-74] Length = 251 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 49/252 (19%), Positives = 82/252 (32%), Gaps = 16/252 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V ++ + V Sbjct: 1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G T LD AL+ D W A+++ TR+G +V G L Sbjct: 59 ASTPGADMTPGKIDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 + V+ A + G T+ V + V+R + Sbjct: 117 GHQVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176 Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 GI L+ + V G LE SN N++ M MI ++F +I Sbjct: 177 GIFRLSAETQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236 Query: 230 NEKSMLEAIRNI 241 + + A + Sbjct: 237 VDDNAGRA-NQL 247 >gi|300954383|ref|ZP_07166837.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 175-1] gi|300318619|gb|EFJ68403.1| flagellar basal-body rod protein FlgF [Escherichia coli MS 175-1] Length = 251 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 83/252 (32%), Gaps = 16/252 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V ++ + V Sbjct: 1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G T LD AL+ D W A+++ TR+G +V G L Sbjct: 59 ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 +PV+ A + G T+ V + V+R + Sbjct: 117 GHPVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176 Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 GI L+ + V G LE SN N++ M MI ++F +I Sbjct: 177 GIFRLSAETQATRGPVLQADPTLRVMSGGLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236 Query: 230 NEKSMLEAIRNI 241 + + A + Sbjct: 237 VDDNAGRA-NQL 247 >gi|323967018|gb|EGB62444.1| flagellar basal-body rod protein FlgF [Escherichia coli M863] gi|327253476|gb|EGE65114.1| flagellar basal-body rod protein FlgF [Escherichia coli STEC_7v] Length = 251 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 49/252 (19%), Positives = 83/252 (32%), Gaps = 16/252 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V ++ + V Sbjct: 1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G T LD AL+ D W A+++ TR+G +V G L Sbjct: 59 ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 +PV+ A + G T+ V + V+R + Sbjct: 117 GHPVIGEAGPIAVPEGAEITVAADGTISALNSGDPANTVAPVGRLKLVKATGSEVQRGDD 176 Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 G+ L+ + V G LE SN N++ M MI ++F +I Sbjct: 177 GMFRLSAESQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236 Query: 230 NEKSMLEAIRNI 241 + + A + Sbjct: 237 VDDNAGRA-NQL 247 >gi|153831599|ref|ZP_01984266.1| flagellar basal-body rod protein FlgF [Vibrio harveyi HY01] gi|156976142|ref|YP_001447048.1| flagellar basal body rod protein [Vibrio harveyi ATCC BAA-1116] gi|148872109|gb|EDL70926.1| flagellar basal-body rod protein FlgF [Vibrio harveyi HY01] gi|156527736|gb|ABU72821.1| hypothetical protein VIBHAR_04913 [Vibrio harveyi ATCC BAA-1116] Length = 243 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 41/242 (16%), Positives = 90/242 (37%), Gaps = 4/242 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + + ++N+SN DT GFR + V ++ + V Sbjct: 1 MDSLLFTATSGASRVLKAQHVRSNNLSNADTAGFRADMERVRSV--ELQGAGFDGRTMVV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + G + TG LD A+ G+ + +E+P TR G KV G++ Sbjct: 59 TNSAATRFDSGDIMKTGRPLDVAIMGEGYLTVETPIGNEAYTRAGNIKVDTFGAMSINGF 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 + V + + G + L V + +++E+ + Sbjct: 119 PVVGENGPIVVPDFQKIEISERGRVSVIPPGGGAEVEVGTLKMVKPAINQLQKESDSLLH 178 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 ++ P V + +E SN +++ E+ ++ LT+ F ++ +++ +A Sbjct: 179 SVDGVPFPADETVQLSPEHIEGSNVSAIDELLSVMSLTRNFEMQVRMMKTA-ETLAQAGN 237 Query: 240 NI 241 + Sbjct: 238 KL 239 >gi|293414370|ref|ZP_06657019.1| flagellar basal-body rod protein FlgF [Escherichia coli B185] gi|291434428|gb|EFF07401.1| flagellar basal-body rod protein FlgF [Escherichia coli B185] Length = 251 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 83/252 (32%), Gaps = 16/252 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V ++ + V Sbjct: 1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G T LD AL+ D W A+++ TR+G +V G L Sbjct: 59 ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 +PV+ A + G T+ V + V+R + Sbjct: 117 GHPVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176 Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 GI L+ + V G LE SN N++ M MI ++F +I Sbjct: 177 GIFRLSAETQATRGLVLQADPTLRVMSGVLEGSNVNTVAAMSDMIASARRFEMQMKVISS 236 Query: 230 NEKSMLEAIRNI 241 + + A + Sbjct: 237 VDDNAGRA-NQL 247 >gi|239834442|ref|ZP_04682770.1| flagellar basal body rod protein FlgG [Ochrobactrum intermedium LMG 3301] gi|239822505|gb|EEQ94074.1| flagellar basal body rod protein FlgG [Ochrobactrum intermedium LMG 3301] Length = 226 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 38/194 (19%), Positives = 65/194 (33%), Gaps = 7/194 (3%) Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSL 114 V + GSF TG D AL G WF ++SP + TR G F DG L Sbjct: 33 GLGVQTAAVRNLHIQGSFNQTGNPYDVALTGRGWFQIQSPTGETLYTRAGAFNKNPDGQL 92 Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGE-KGEISQKGKVIATMGLYSVDMSQGFVRRE 173 V+ G + P I K + + + L + G Sbjct: 93 VTLDGNPVEPAITIPPDAIEVTITDTGQVFAKLQDQINQVDLGQLTLANFTNEAGLEPLG 152 Query: 174 NSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228 + ++K+G+LE SN + + E+ +I + + + +I Sbjct: 153 GNLYRETEASGGPLVGVPGDPGYGSIKQGYLEASNVDPVKEITDLITAQRAYEMNSKVIQ 212 Query: 229 ENEKSMLEAIRNIA 242 ++ +N+ Sbjct: 213 AADEMAATVSKNLR 226 >gi|205375363|ref|ZP_03228153.1| flagellar hook-basal body complex protein [Bacillus coahuilensis m4-4] Length = 279 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 51/280 (18%), Positives = 104/280 (37%), Gaps = 39/280 (13%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M N+ L+Q L ++ N++N DT G++ +FSE++ ++ Sbjct: 1 MNRIMNVATNTMAQLQQHLDVISHNVANVDTNGYKAQNARFSEMLVQQFDNQKNPANEIG 60 Query: 56 ---------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF-----ALESPRGIILT 101 G+ ++ G+ STG LDF L+ + + + Sbjct: 61 RLTPNGLRLGVGAGIGQIQMNTSQGALQSTGRSLDFILQNQTHYFKVLNQSGGQSEVNYS 120 Query: 102 RDGRFKVTDDGS---LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG---EISQKGKVI 155 R G F ++ +++ + P+L+ PI IP F + G + +G+ Sbjct: 121 RSGAFYLSPLNDDTAMLTDANGNPILNSDDQPITIPGDATSFYPDQNGVLVVETPRGQER 180 Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-------------TVKRGFLEDS 202 +G+ S+ Q + + + L+ + +VK+GF+E S Sbjct: 181 IELGVVSIQKPQFLESKGGNLVGLPTNFNQLDVDANTILTDLNGANRAEISVKQGFIEKS 240 Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 N + E+ MI++ + + I ++ M + I Sbjct: 241 NVDLSKELTDMINVQRSYQFQARTISMADQMMG-LVNGIR 279 >gi|188997558|ref|YP_001931809.1| flagellar basal body rod protein [Sulfurihydrogenibium sp. YO3AOP1] gi|188932625|gb|ACD67255.1| flagellar basal body rod protein [Sulfurihydrogenibium sp. YO3AOP1] Length = 236 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 57/239 (23%), Positives = 103/239 (43%), Gaps = 13/239 (5%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV-KFSEVVGAIKNDIDQKISFVASGK 63 I + ++L T +N++N++T GF+ + V + S+ + K + + F Sbjct: 8 IYILASGGERATEQLDTTTNNIANSNTPGFKKLLVREMSQKIPENKGKVGDLLVFPRFMD 67 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPV 123 + G I T LD A+ D +F +ES G TR+G F + +G LV +G Y + Sbjct: 68 SSVLNFQGPLIKTENNLDLAIVRDGFFTVESAIGRYYTRNGHFSINQEGYLVDVNGAYVL 127 Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183 +I +D F + KGEI Q G++ + + ++ Q G I Sbjct: 128 ---DENFRRIQIQDSKFQITPKGEIYQNGQITGKIRVVNLQNLQAVGNSYYQGQEQQITN 184 Query: 184 TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 +K+G+LE +N N + EM +MI+ ++F+ L + + + I Sbjct: 185 F--------EIKQGYLEGANLNIVKEMVEMINNHRRFDIYMNLAKYLD-MLEGKVNEIG 234 >gi|51596012|ref|YP_070203.1| flagellar basal body rod protein FlgF [Yersinia pseudotuberculosis IP 32953] gi|153947059|ref|YP_001401289.1| flagellar basal body rod protein FlgF [Yersinia pseudotuberculosis IP 31758] gi|170024646|ref|YP_001721151.1| flagellar basal body rod protein FlgF [Yersinia pseudotuberculosis YPIII] gi|51589294|emb|CAH20915.1| flagellar basal-body rod protein FlgF [Yersinia pseudotuberculosis IP 32953] gi|152958554|gb|ABS46015.1| flagellar basal-body rod protein FlgF [Yersinia pseudotuberculosis IP 31758] gi|169751180|gb|ACA68698.1| flagellar basal-body rod protein FlgF [Yersinia pseudotuberculosis YPIII] Length = 251 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 45/252 (17%), Positives = 87/252 (34%), Gaps = 13/252 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A+N++N T GFR V I + V Sbjct: 1 MDHAIYTAMGAARQSLELQAVTANNLANASTPGFRAQLAAMRAV--PIDGPSLATRTMVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + G+ +G LD AL+ D + A++ P TR+G +++ +G + + G Sbjct: 59 TSTPGVDISQGTMNFSGRPLDVALQQDGYLAVQLPDGSEAYTRNGNIQISANGQM-TVQG 117 Query: 120 KYPVLDM---ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + D P + + + V + G + + G Sbjct: 118 YPLMGDNGPIDVPPQAAVTIAADGTISALNAGDSPNTIAQLGQIKRVQATAGEMMHGDDG 177 Query: 177 IS------PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + L + V + G LE SN ++ M MI + F +I Sbjct: 178 LFHLTPETQQARGAQLPNDPLVKIMPGVLEGSNVKAVEAMTDMIANARSFEMQMKVIQSV 237 Query: 231 EKSMLEAIRNIA 242 +++ A + +A Sbjct: 238 DENEQSANQLLA 249 >gi|51597636|ref|YP_071827.1| flagellar basal body rod protein FlgF [Yersinia pseudotuberculosis IP 32953] gi|186896770|ref|YP_001873882.1| flagellar basal body rod protein FlgF [Yersinia pseudotuberculosis PB1/+] gi|51590918|emb|CAH22574.1| putative flagellar basal-body rod protein FlgF [Yersinia pseudotuberculosis IP 32953] gi|186699796|gb|ACC90425.1| flagellar basal-body rod protein FlgF [Yersinia pseudotuberculosis PB1/+] Length = 243 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 50/244 (20%), Positives = 94/244 (38%), Gaps = 8/244 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M ++ + A+N++N++T GFR + V Sbjct: 1 MDKLLYTAVSGANRSLSQQQIHANNLANSNTQGFRADLE--KATATQVMGGGYNSRVAVL 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 S + S TG +LD AL+ A+ S + TR+G+ V+ +G ++ +G Sbjct: 59 SQNAGVDMTPASLQETGRDLDIALKNQGLIAVLSGGREVYTRNGQMDVSAEG-ALTINGL 117 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSGI 177 + D + + I + G I Q G + + VD+ +R+ N G+ Sbjct: 118 PVLGDGGPIVLPPYSALSIADDGTIAIIPQAGGIKTPEEIERIKLVDIPANQLRKNNRGL 177 Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + P V V LE SN +++ EM I L+++F + ++ E + +A Sbjct: 178 LVSNRG-PAARDETVQVVNKHLESSNVSAISEMIASISLSRQFEAQIKMMKVAED-LAQA 235 Query: 238 IRNI 241 + Sbjct: 236 GNRM 239 >gi|315618247|gb|EFU98837.1| flagellar basal-body rod protein FlgF [Escherichia coli 3431] Length = 251 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 83/252 (32%), Gaps = 16/252 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V ++ + V Sbjct: 1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G T LD AL+ D W A+++ TR+G +V G L Sbjct: 59 ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDSTGQL--TIQ 116 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 +PV+ A + G T+ V + V+R + Sbjct: 117 GHPVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176 Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 GI L+ + V G LE SN N++ M MI ++F +I Sbjct: 177 GIFRLSAETQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236 Query: 230 NEKSMLEAIRNI 241 + + A + Sbjct: 237 VDDNAGRA-NQL 247 >gi|186895115|ref|YP_001872227.1| flagellar basal body rod protein FlgF [Yersinia pseudotuberculosis PB1/+] gi|186698141|gb|ACC88770.1| flagellar basal-body rod protein FlgF [Yersinia pseudotuberculosis PB1/+] Length = 251 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 45/252 (17%), Positives = 87/252 (34%), Gaps = 13/252 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A+N++N T GFR V I + V Sbjct: 1 MDHAIYTAMGAARQSLELQAVTANNLANASTPGFRAQLAAMRAV--PIDGPSLATRTMVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + G+ +G LD AL+ D + A++ P TR+G +++ +G + + G Sbjct: 59 TSTPGVDISQGTMNFSGRPLDVALQQDGYLAVQLPDGSEAYTRNGNIQISANGQM-TVQG 117 Query: 120 KYPVLDM---ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + D P + + + V + G + + G Sbjct: 118 YPLMGDNGPIDVPPQAAVTIAADGTISALNAGDSPNAIAQLGQIKRVQATAGEMMHGDDG 177 Query: 177 IS------PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + L + V + G LE SN ++ M MI + F +I Sbjct: 178 LFHLTPETQQARGAQLPNDPLVKIMPGVLEGSNVKAVEAMTDMIANARSFEMQMKVIQSV 237 Query: 231 EKSMLEAIRNIA 242 +++ A + +A Sbjct: 238 DENEQSANQLLA 249 >gi|161503734|ref|YP_001570846.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160865081|gb|ABX21704.1| hypothetical protein SARI_01819 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 251 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 42/252 (16%), Positives = 73/252 (28%), Gaps = 16/252 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V + + V Sbjct: 1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVDGLSLATRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTD------DGS 113 + G T LD AL+ D W +++ TR+G +V G Sbjct: 59 ASTPGADMTPGQLDYTSRPLDVALQQDGWLVVQAADGAEGYTRNGNIQVGPTGQLTIQGH 118 Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG----KVIATMGLYSVDMSQGF 169 V G + + + K++ G G Sbjct: 119 PVIGEGGPITVPEGAEITIAADGTISALNPGDPPNTVAPVGQLKLVKAEGHEVQRGDDGL 178 Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 R + L + + G LE SN + M MI ++F +I Sbjct: 179 FRLTADAQA--SRGAVLAADPSIRIMSGVLEGSNVKPVEAMTDMIANARRFEMQMKVITS 236 Query: 230 NEKSMLEAIRNI 241 +++ A + Sbjct: 237 VDENEGRA-NQL 247 >gi|62179695|ref|YP_216112.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62127328|gb|AAX65031.1| flagellar biosynthesis, cell-proximal portion of basal-body rod [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] Length = 251 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 43/252 (17%), Positives = 73/252 (28%), Gaps = 16/252 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V + + V Sbjct: 1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVDGLSLATRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTD------DGS 113 + G T LD AL+ D W +++ TR+G +V G Sbjct: 59 ASTPGADMTPGQLDYTSRPLDVALQQDGWLVVQAADGAEGYTRNGNIQVGPTGQLTIQGH 118 Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG----KVIATMGLYSVDMSQGF 169 V G + S + K++ G G Sbjct: 119 PVIGEGGPITVPEGSEITIAADGTISALNPGDPPNTVAPVGRLKLVKAEGNEVQRSDDGL 178 Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 R + L + + G LE SN + M MI ++F +I Sbjct: 179 FRLTTEAQAE--RGAVLAADPSIRIMSGVLEGSNVKPVEAMTDMIANARRFEMQMKVITS 236 Query: 230 NEKSMLEAIRNI 241 +++ A + Sbjct: 237 VDENEGRA-NQL 247 >gi|170750088|ref|YP_001756348.1| hypothetical protein Mrad2831_3689 [Methylobacterium radiotolerans JCM 2831] gi|170656610|gb|ACB25665.1| protein of unknown function DUF1078 domain protein [Methylobacterium radiotolerans JCM 2831] Length = 263 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 49/255 (19%), Positives = 93/255 (36%), Gaps = 21/255 (8%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + + ++ A L+ ++ N++NT TVGF++ + +F++++ D Q V Sbjct: 6 ALSNSISGASAQSLALNNISGNIANTQTVGFKSTETRFADMLAET-GDSTQLAGGVLPST 64 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGII----------LTRDGRFKVTDDGS 113 G+ STG + A+ G+ +F ++ G TR G F G Sbjct: 65 RNSLNIQGTMQSTGVSTNLAISGNGYFIVKKNTGTPDSPAFGGDTGYTRRGDFAPDASGY 124 Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLY---------SVD 164 L + +G Y ++ + A G Sbjct: 125 LSNGAGYYLFAGPSATTPVQVPTGASTLASLAVSPAGTLTGTAADGSTLALGTLQLAQFG 184 Query: 165 MSQGFVRRENS-GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223 M + ++ TP L+G TV G +E SNA + +MI Q + + Sbjct: 185 MQDNLASLDGGTYVATGQSGTPSYGLNGATVTAGSVEQSNAGISDQFSKMIETQQAYTAN 244 Query: 224 TTLIDENEKSMLEAI 238 T ++ ++ + +AI Sbjct: 245 TKVMSTTDQMLQDAI 259 >gi|157146225|ref|YP_001453544.1| flagellar basal body rod protein FlgF [Citrobacter koseri ATCC BAA-895] gi|157083430|gb|ABV13108.1| hypothetical protein CKO_01982 [Citrobacter koseri ATCC BAA-895] Length = 251 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 49/252 (19%), Positives = 82/252 (32%), Gaps = 16/252 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V ++ + VA Sbjct: 1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVA 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G T LD AL+ D W +++ TR+G +V G L Sbjct: 59 ASTPGADMTPGQMDYTSRPLDVALQQDGWLVVQTADGNEGYTRNGSIQVDPTGQL--TIQ 116 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 +PV+ A + G T+ V V+R + Sbjct: 117 GHPVIGEAGPIAVPEGSEITIAADGTISALNPGDPANTVAPVGRLKLVKALGSEVQRGDD 176 Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 G+ L+ + V G LE SN N++ M MI ++F +I Sbjct: 177 GMFRLSAATQAARGPVLQADPSIRVMSGVLEGSNVNAVSAMSDMIANARRFEMQMKVISS 236 Query: 230 NEKSMLEAIRNI 241 + + A + Sbjct: 237 VDDNAGRA-NQL 247 >gi|56413835|ref|YP_150910.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197362758|ref|YP_002142395.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56128092|gb|AAV77598.1| putative flagellar basal-body rod protein FlgF (proximal rod protein) [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197094235|emb|CAR59740.1| putative flagellar basal-body rod protein FlgF (proximal rod protein) [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 251 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 43/251 (17%), Positives = 77/251 (30%), Gaps = 14/251 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V + + V Sbjct: 1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVDGLSLATRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G T LD AL+ D W +++ TR+G +V G ++ G Sbjct: 59 ASTPGADMTPGQLDYTSRPLDVALQQDGWLVVQAADGAEGYTRNGNIQVGPTG-QLTIQG 117 Query: 120 KYPVLDM---ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + + + + V L V V+R + G Sbjct: 118 HPVIGEGGPITVPEGSVITIAADGTISALNPGDPPNTVAPVGRLKLVKAEGNEVQRSDDG 177 Query: 177 ISPNIPPTPLEDL------SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + E + + G LE SN + M MI ++F +I Sbjct: 178 LFRLTAEAQAERGAVLAADPSIRIMSGVLEGSNVKPVEAMTDMIANARRFEMQMKVITSV 237 Query: 231 EKSMLEAIRNI 241 +++ A + Sbjct: 238 DENEGRA-NQL 247 >gi|157147101|ref|YP_001454420.1| flagellar basal body rod protein FlgF [Citrobacter koseri ATCC BAA-895] gi|157084306|gb|ABV13984.1| hypothetical protein CKO_02878 [Citrobacter koseri ATCC BAA-895] Length = 243 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 45/236 (19%), Positives = 88/236 (37%), Gaps = 7/236 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M ++ + A+N++N +T GFR+ + + + Sbjct: 1 MDRLIFTAMSGASRSLSQQQIHANNLANVNTQGFRSDLDN--AISQQVNGEGYASRYMAL 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + + G+ TG LD A++GD AL S + TR+G+ V+ +G +S +G Sbjct: 59 PTQGGVDMTPGAVRETGRNLDIAIKGDGLIALASGNREVYTRNGQIDVSPEGD-LSINGL 117 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSGI 177 D + + I G + G + A + + V++ + + G Sbjct: 118 PVEGDNGPIVLPPFSSVSIGEDGVITIVPDDGDIAAPVDVDRIKLVNIPVSDLSKNVDGF 177 Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 + V V G LE +N +++ EM I L ++F + ++ E Sbjct: 178 LVSNTAI-NPRDEEVMVASGHLETANVSAINEMVASIALNRQFEAQIKMMKAAEDL 232 >gi|238764393|ref|ZP_04625343.1| Flagellar basal-body rod protein flgF [Yersinia kristensenii ATCC 33638] gi|238697419|gb|EEP90186.1| Flagellar basal-body rod protein flgF [Yersinia kristensenii ATCC 33638] Length = 251 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 44/251 (17%), Positives = 84/251 (33%), Gaps = 11/251 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A+N++N T GFR V I + V Sbjct: 1 MDHAIYTAMGAARQSLELQAVTANNLANASTPGFRAQLAAMRAV--PIDGPSMATRTMVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSA-- 117 + + G+ +G LD AL+ D + A++ P TR+G +++ DG + Sbjct: 59 ASTPGVDISQGTMNYSGRPLDVALQQDGYLAVQLPDGTEAYTRNGNIQISADGQMTVQGY 118 Query: 118 --SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 G +D+ D + G+ + + + + Sbjct: 119 PLMGDNGPIDVPPQAAITIAADGTISALNAGDSPNTIAQLGQIKRVRATAGEVMHGDDGL 178 Query: 176 GISPN----IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 L + + V G LE SN ++ M MI + F +I + Sbjct: 179 FHLTPETQQARGAQLANDPLIKVMPGVLEGSNVKAVEAMTDMIANARSFEMQMKVIHSVD 238 Query: 232 KSMLEAIRNIA 242 ++ A + +A Sbjct: 239 ENEQRANQLLA 249 >gi|293395584|ref|ZP_06639867.1| flagellar basal-body rod protein FlgF [Serratia odorifera DSM 4582] gi|291421903|gb|EFE95149.1| flagellar basal-body rod protein FlgF [Serratia odorifera DSM 4582] Length = 251 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 47/246 (19%), Positives = 82/246 (33%), Gaps = 11/246 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A+N++N T GFR V + Q + V Sbjct: 1 MDHAIYTAMGAARQTLDQQAITANNLANASTPGFRAQLAALRAV--PVDGPSLQTRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSA-- 117 + G+ TG LD AL+ D + AL+ TR+G +++ G L Sbjct: 59 ASTPGADMSQGALNYTGRPLDVALQQDGFLALQQADGSEAYTRNGNIQISSTGQLTVQGL 118 Query: 118 --SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 G +++ D + G+ I + L D + + Sbjct: 119 PLMGDGGPIEVPPQAEITIAADGTISALNPGDPPNTIAQIGRLKLVKADAREVMRGDDGL 178 Query: 176 GISPNIP----PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 L++ V V G +E SN M M MI ++F +I + Sbjct: 179 FHLTPATREQRGNQLQNDPLVQVMPGVIEGSNVKPMETMVDMIANARRFEMQMKVIHSVD 238 Query: 232 KSMLEA 237 ++ A Sbjct: 239 ENEQRA 244 >gi|74311639|ref|YP_310058.1| flagellar basal body rod protein FlgF [Shigella sonnei Ss046] gi|73855116|gb|AAZ87823.1| flagellar protein for cell-proximal portion of basal-body rod [Shigella sonnei Ss046] Length = 251 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 49/252 (19%), Positives = 82/252 (32%), Gaps = 16/252 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V ++ + V Sbjct: 1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G T LD AL+ D W A+++ TR+G +V G L Sbjct: 59 ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 + V+ A + G T+ V + V+R + Sbjct: 117 GHQVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176 Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 GI L+ + V G LE SN N++ M MI ++F +I Sbjct: 177 GIFRLSAETQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236 Query: 230 NEKSMLEAIRNI 241 + + A + Sbjct: 237 VDDNAGRA-NQL 247 >gi|296102907|ref|YP_003613053.1| flagellar basal body rod protein FlgF [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057366|gb|ADF62104.1| flagellar basal body rod protein FlgF [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 251 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 50/253 (19%), Positives = 86/253 (33%), Gaps = 15/253 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V ++ + V Sbjct: 1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119 + G T LD AL+ D W A+++ G TR+G +V+ G L Sbjct: 59 ASTPGADMTPGQMDYTARPLDVALQQDGWLAVQTADGGEGYTRNGNIQVSATGQL--TIQ 116 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 +PV+ A + G T+ V V+R + Sbjct: 117 GHPVMGEAGPLTVPEGSELTIAADGTISALNPGDPANTVAPVGRLKLVKADGKEVQRGDD 176 Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 G+ L+ + V G LE SN + M MI ++F +I Sbjct: 177 GMFRLTQAAQATRGATLQADPTIRVMSGVLEGSNVKPVEAMTDMIASARRFEMQMKIISS 236 Query: 230 NEKSMLEAIRNIA 242 +++ +A + +A Sbjct: 237 VDENAGKANQLLA 249 >gi|16764534|ref|NP_460149.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|161614599|ref|YP_001588564.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167553034|ref|ZP_02346784.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167994042|ref|ZP_02575134.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168234104|ref|ZP_02659162.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168237260|ref|ZP_02662318.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168244777|ref|ZP_02669709.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168264029|ref|ZP_02686002.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168467130|ref|ZP_02700972.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194446055|ref|YP_002040432.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194449678|ref|YP_002045177.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194470312|ref|ZP_03076296.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194736339|ref|YP_002114177.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197265515|ref|ZP_03165589.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|198245943|ref|YP_002215959.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200390876|ref|ZP_03217487.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205353084|ref|YP_002226885.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207857314|ref|YP_002243965.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224584318|ref|YP_002638116.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238911002|ref|ZP_04654839.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|120298|sp|P16323|FLGF_SALTY RecName: Full=Flagellar basal-body rod protein flgF; AltName: Full=Putative proximal rod protein gi|47676|emb|CAA36313.1| flgF protein product (AA 1-251) [Salmonella enterica subsp. enterica serovar Typhimurium] gi|16419695|gb|AAL20108.1| flagellar biosynthesis protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|161363963|gb|ABX67731.1| hypothetical protein SPAB_02349 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194404718|gb|ACF64940.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194407982|gb|ACF68201.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194456676|gb|EDX45515.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194711841|gb|ACF91062.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195630350|gb|EDX48976.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197243770|gb|EDY26390.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197289883|gb|EDY29244.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197940459|gb|ACH77792.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199603321|gb|EDZ01867.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205272865|emb|CAR37794.1| putative flagellar basal-body rod protein FlgF (proximal rod protein) [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205322401|gb|EDZ10240.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205328032|gb|EDZ14796.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205331944|gb|EDZ18708.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205336412|gb|EDZ23176.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205347326|gb|EDZ33957.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206709117|emb|CAR33450.1| putative flagellar basal-body rod protein FlgF (proximal rod protein) [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224468845|gb|ACN46675.1| putative flagellar basal-body rod protein FlgF (proximal rod protein) [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261246389|emb|CBG24198.1| putative flagellar basal-body rod protein FlgF (proximal rod protein) [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267992952|gb|ACY87837.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157719|emb|CBW17211.1| putative flagellar basal-body rod protein FlgF (proximal rod protein) [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312912165|dbj|BAJ36139.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321223796|gb|EFX48859.1| Flagellar basal-body rod protein FlgF [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322616548|gb|EFY13457.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322620511|gb|EFY17375.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622505|gb|EFY19350.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629656|gb|EFY26431.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322632624|gb|EFY29370.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636881|gb|EFY33584.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641581|gb|EFY38219.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644071|gb|EFY40617.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650029|gb|EFY46447.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653954|gb|EFY50277.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658486|gb|EFY54748.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322663344|gb|EFY59546.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322670078|gb|EFY66218.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674858|gb|EFY70949.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676672|gb|EFY72739.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682594|gb|EFY78613.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686653|gb|EFY82632.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322714165|gb|EFZ05736.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323129448|gb|ADX16878.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323195767|gb|EFZ80943.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198341|gb|EFZ83445.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323209178|gb|EFZ94115.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323209682|gb|EFZ94611.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217862|gb|EGA02577.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323222150|gb|EGA06534.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323224922|gb|EGA09180.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229664|gb|EGA13787.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323232889|gb|EGA16985.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240624|gb|EGA24666.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323242938|gb|EGA26959.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323250255|gb|EGA34144.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323252630|gb|EGA36468.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323258842|gb|EGA42495.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323261031|gb|EGA44624.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266940|gb|EGA50425.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323269981|gb|EGA53430.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326623707|gb|EGE30052.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326628164|gb|EGE34507.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] gi|332988069|gb|AEF07052.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 251 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 43/252 (17%), Positives = 73/252 (28%), Gaps = 16/252 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V + + V Sbjct: 1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVDGLSLATRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTD------DGS 113 + G T LD AL+ D W +++ TR+G +V G Sbjct: 59 ASTPGADMTPGQLDYTSRPLDVALQQDGWLVVQAADGAEGYTRNGNIQVGPTGQLTIQGH 118 Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG----KVIATMGLYSVDMSQGF 169 V G + S + K++ G G Sbjct: 119 PVIGEGGPITVPEGSEITIAADGTISALNPGDPPNTVAPVGRLKLVKAEGNEVQRSDDGL 178 Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 R + L + + G LE SN + M MI ++F +I Sbjct: 179 FRLTAEAQAE--RGAVLAADPSIRIMSGVLEGSNVKPVEAMTDMIANARRFEMQMKVITS 236 Query: 230 NEKSMLEAIRNI 241 +++ A + Sbjct: 237 VDENEGRA-NQL 247 >gi|90577345|ref|ZP_01233156.1| putative flagellar basal-body rod protein [Vibrio angustum S14] gi|90440431|gb|EAS65611.1| putative flagellar basal-body rod protein [Vibrio angustum S14] Length = 243 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 42/242 (17%), Positives = 90/242 (37%), Gaps = 4/242 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + + ++N+SN DT GFR + + ++ + V Sbjct: 1 MDSFLYTATSGASRVLKAQHVRSNNLSNADTAGFRADMERVKSI--PLQGAGFDGRTMVV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119 + + G I TG LD A+ GD +F +++ TR G +V + G + Sbjct: 59 TNSAATRFDAGDVIKTGRALDIAINGDGFFTVQTIAGNEAYTRTGNIRVDEQGMMRVNGF 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 A V + + G + L V+ +++++ G+ Sbjct: 119 PLMSEGEALVLPEYQNVEISDKGVVSIVPLGGGAELEVGQLKLVNPDFNQLQKQSDGLLH 178 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + V + G LE SN +++ E+ ++ LT+ F ++ +++ +A Sbjct: 179 PVNDQVFAQDPSVAMTAGHLEGSNVSAINELVSVMSLTRNFEMQVRMMKTA-ETLAQAGT 237 Query: 240 NI 241 + Sbjct: 238 RL 239 >gi|332162900|ref|YP_004299477.1| flagellar basal-body rod protein FlgF [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325667130|gb|ADZ43774.1| Flagellar basal-body rod protein FlgF [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330863350|emb|CBX73473.1| hypothetical protein YEW_ES20680 [Yersinia enterocolitica W22703] Length = 243 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 49/239 (20%), Positives = 90/239 (37%), Gaps = 7/239 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M ++ + A+N+SN +T GFR + V Sbjct: 1 MDKLLYTAVSGANRSLTQQQIHANNLSNVNTQGFRADLE--RATATQVPGGGYNSRVAVL 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 S + GS TG ELD A++ A+ S + TR+G+ +V DG ++ +G Sbjct: 59 SQNAGVDMTAGSLQETGRELDVAIKDRGLIAVLSGGREVYTRNGQMEVGPDGD-LTINGM 117 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSGI 177 + D ++ + + + G I Q G + + VD+ + + N G+ Sbjct: 118 PVLGDGGAIVLPAYSAVSVADDGTIAIIPQAGGIKTPAEVDRIKLVDIPANQLSKNNRGL 177 Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 N V + LE SN +++ EM I L+++F + ++ E+ Sbjct: 178 LVNRRG-AAARDENVQLVSKHLESSNISAISEMTASISLSRQFEAQIKMMKVAEELAQS 235 >gi|227112522|ref|ZP_03826178.1| flagellar basal body rod protein FlgF [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 251 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 93/252 (36%), Gaps = 13/252 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + ++ + A+N++N T GFR V + + V Sbjct: 1 MDHAIYTAMGGASQSLEKQAITANNLANASTPGFRAQLSALRAV--PVNGLTLPTRTLVV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119 + G TG +D AL ++W A+++ G TR+G ++ DG ++ G Sbjct: 59 ASTPGADMTEGVMNYTGRAMDVALPKESWLAVQAADGGEAYTRNGNMEINADG-QLTIQG 117 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEIS--QKGKVIATMGLYSVDMSQGFVRRENS-- 175 + + D + + + I G ++ IA +G + + G + Sbjct: 118 RVVMGDGGPIDVPPQAQISISPDGTISALNAGDPPNTIAQLGRLKLVKATGQEVERSDDG 177 Query: 176 -----GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + L++ V + G +E SN N++ M MI ++F +I Sbjct: 178 LFRLTQQAQQQRGNVLQNDPTVRIMPGVIEGSNVNTVDTMVDMIANARRFEMQMKIISSV 237 Query: 231 EKSMLEAIRNIA 242 + + A + +A Sbjct: 238 DDNAQRANQILA 249 >gi|134280876|ref|ZP_01767586.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei 305] gi|125657219|gb|ABN48707.1| flagellar basal body rod protein [Burkholderia pseudomallei] gi|134247898|gb|EBA47982.1| flagellar basal-body rod protein FlgF [Burkholderia pseudomallei 305] Length = 241 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 47/241 (19%), Positives = 82/241 (34%), Gaps = 3/241 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M ++ ++ A+NM+N T GF ++ + Sbjct: 1 MDALIYTVMSGADRTLHGIAVHANNMANAQTDGFLAELEMAES--QPVRGYGYDSRHLLN 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 L+ E G + TG ELD A+ G +F +++ TR G F++ DG+L Sbjct: 59 PRANALNGEAGVVVDTGRELDAAINGGGYFTVDAQGSEAYTRAGNFEIDADGALTVNGRP 118 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 V + + +V A L VD + + +G+ Sbjct: 119 VIGEGGPIVLPEFTSLRIGEDGTISITSPGDTEVQAVERLALVDAPASALVKNEAGLLVA 178 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 PL + V V G LE SN + + EM + L + F + + + A Sbjct: 179 RDGQPLPASNEVKVLGGHLERSNVSPVEEMIATMSLNRAFEVQMRMFNAAGEMAD-AGNR 237 Query: 241 I 241 + Sbjct: 238 L 238 >gi|168822621|ref|ZP_02834621.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|204930894|ref|ZP_03221767.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204320353|gb|EDZ05557.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205340993|gb|EDZ27757.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320086382|emb|CBY96155.1| Flagellar basal-body rod protein flgF putative proximal rod protein [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 251 Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 42/252 (16%), Positives = 73/252 (28%), Gaps = 16/252 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V + + V Sbjct: 1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVDGLSLATRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTD------DGS 113 + G T LD AL+ D W +++ TR+G +V G Sbjct: 59 ASTPGADMTPGQLDYTSRPLDVALQQDGWLVVQAADGAEGYTRNGNIQVGPTGQLTIQGH 118 Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG----KVIATMGLYSVDMSQGF 169 V G + + + K++ G G Sbjct: 119 PVIGEGGPITVPEGAEITIAADGTISALNPGDPPNTVAPVGRLKLVKAEGNEVQRSDDGL 178 Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 R + L + + G LE SN + M MI ++F +I Sbjct: 179 FRLTAEAQAE--RGAVLAADPSIRIMSGVLEGSNVKPVEAMTDMIANARRFEMQMKVITS 236 Query: 230 NEKSMLEAIRNI 241 +++ A + Sbjct: 237 VDENEGRA-NQL 247 >gi|134300239|ref|YP_001113735.1| hypothetical protein Dred_2400 [Desulfotomaculum reducens MI-1] gi|134052939|gb|ABO50910.1| protein of unknown function DUF1078 domain protein [Desulfotomaculum reducens MI-1] Length = 856 Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 40/201 (19%), Positives = 72/201 (35%), Gaps = 7/201 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------Q 54 M S G++ + R+ +N++N +T G+++ +V F + + Q Sbjct: 1 MLRSLYSGISGMRNHQTRMDVTGNNIANVNTNGYKSSRVNFQDTLSQTVRSAGNGTNPAQ 60 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSL 114 S ++ G + G STG LD ++G+ +F + TR+G F V G L Sbjct: 61 VGSGMSVGSVSNNFTQGPMQSTGRTLDLGIQGNGFFVVSDGTNEFYTREGIFFVDKQGFL 120 Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174 V+ G + N+G G I+ +S + SQ + Sbjct: 121 VNGEGLRVQSLAGQDIRVLNGPVSTINIGPDGAIAGTN-TAGQPLKFSNNDSQAIITPAQ 179 Query: 175 SGISPNIPPTPLEDLSGVTVK 195 P + T+K Sbjct: 180 QSSIKGAPKYTTPKVEEATIK 200 Score = 88.0 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 16/123 (13%), Positives = 40/123 (32%), Gaps = 5/123 (4%) Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 + + I K + + + + L + +G + + ++ Sbjct: 731 VNIGGSHAADLIGDKPDKVDGEAASVTPPPQDTMGVIKLVTFQNPEGLEKAGRNLFGTSV 790 Query: 182 PPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + T+ G+LE SN + E MI + + + +I ++ + E Sbjct: 791 SSGEPKQGQANQSGFGTINSGYLEMSNVDLTEEFTNMITTQRGYQANARVITVSDSLLEE 850 Query: 237 AIR 239 I+ Sbjct: 851 LIQ 853 >gi|227328339|ref|ZP_03832363.1| flagellar basal body rod protein FlgF [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 251 Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 47/252 (18%), Positives = 93/252 (36%), Gaps = 13/252 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + ++ + A+N++N T GFR V + + V Sbjct: 1 MDHAIYTAMGGASQSLEKQAITANNLANASTPGFRAQLSALRAV--PVNGLTLPTRTLVV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119 + G TG +D AL ++W A+++ G TR+G ++ DG ++ G Sbjct: 59 ASTPGADMTEGVMNYTGRAMDVALPKESWLAVQTANGGEAYTRNGNMEINADG-QLTIQG 117 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEIS--QKGKVIATMGLYSVDMSQGFVRRENS-- 175 + + D + I + I G ++ IA +G + + G + Sbjct: 118 RVVMGDGGPIDIPPQAQISISPDGTISALNAGDPPNTIAQLGRLKLVKATGQEVERSDDG 177 Query: 176 -----GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + L++ V + G +E SN N++ M MI ++F +I Sbjct: 178 LFRLTQQAQQQRGNVLQNDPTVRIMPGVIEGSNVNTVDTMVDMIANARRFEMQMKVISSV 237 Query: 231 EKSMLEAIRNIA 242 + + A + +A Sbjct: 238 DDNAQRANQILA 249 >gi|254227984|ref|ZP_04921414.1| flagellar basal-body rod protein FlgF [Vibrio sp. Ex25] gi|262396034|ref|YP_003287887.1| flagellar basal-body rod protein FlgF [Vibrio sp. Ex25] gi|151939480|gb|EDN58308.1| flagellar basal-body rod protein FlgF [Vibrio sp. Ex25] gi|262339628|gb|ACY53422.1| flagellar basal-body rod protein FlgF [Vibrio sp. Ex25] Length = 243 Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 42/242 (17%), Positives = 90/242 (37%), Gaps = 4/242 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + + ++N+SN DT GFR + V ++ + V Sbjct: 1 MDSLLFTATSGASRVLKAQHVRSNNLSNADTAGFRADMERVRSV--EMQGPGFDGRTMVV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + G + TG LD A+ G+ + A+E+P TR G +V G++ Sbjct: 59 TNSASTRFDSGDIMKTGRPLDVAIMGEGYLAVETPAGNEAYTRAGNIQVDTFGAMTINGF 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 + V + + G I L V +++E+ + Sbjct: 119 PVLGENGPLVVPDYQKIEISERGQVSVIPPGGGAEIVAGTLKLVKPEMNQLQKESDSLLH 178 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 ++ P V + +E SN +++ E+ ++ LT+ F ++ +++ +A Sbjct: 179 SVDGVPFAADETVQLSPEHIEGSNVSAIDELISVMSLTRNFEMQVRMMKTA-ETLAQAGN 237 Query: 240 NI 241 + Sbjct: 238 KL 239 >gi|271500067|ref|YP_003333092.1| flagellar basal-body rod protein FlgF [Dickeya dadantii Ech586] gi|270343622|gb|ACZ76387.1| flagellar basal-body rod protein FlgF [Dickeya dadantii Ech586] Length = 251 Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 52/252 (20%), Positives = 90/252 (35%), Gaps = 13/252 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A ++ + + NM+N T GFR V I+ ++ + V Sbjct: 1 MDHAIYTAMGAASQTLEQQAVTSHNMANASTPGFRAQLAAMRAV--PIQGVTNETRTLVV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 S + GS TG +D AL D W A+ + TR+G ++ +G ++ G Sbjct: 59 SSTPGVDTTPGSMDYTGRSMDVALSQDGWLAVRAADGSEAYTRNGNMEINSNG-QLTVQG 117 Query: 120 KYPVLDM---ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + D P + V L V + V R + G Sbjct: 118 NLVMGDGGPIEVPPQTQLTIGPDGTINALNPSDAANTVTQIGRLKLVKATANEVVRGDDG 177 Query: 177 ISPNIPPTPLEDLS------GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 P + + V V G LE SN N++ M +MI +++F +I Sbjct: 178 FFRVSPAVQQQRGAVLQNDATVRVMPGVLEGSNVNTVESMVEMISNSRRFEMQMKVISSV 237 Query: 231 EKSMLEAIRNIA 242 + + A + +A Sbjct: 238 DDNTQRANQILA 249 >gi|150388209|ref|YP_001318258.1| flagellar basal body rod protein [Alkaliphilus metalliredigens QYMF] gi|149948071|gb|ABR46599.1| flagellar basal body rod protein [Alkaliphilus metalliredigens QYMF] Length = 363 Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 44/201 (21%), Positives = 88/201 (43%), Gaps = 2/201 (0%) Query: 44 VVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103 + + + + S V K + G+ T LD AL G +F + +P G + TR+ Sbjct: 161 LYRPLGHVLGTMNSGVRIQKIETNFAQGAVAETANPLDVALNGQGFFRILTPNGEMYTRN 220 Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVG--EKGEISQKGKVIATMGLY 161 G F ++++G LV+ G + ++ Q N+ +KGEI G V+ + + Sbjct: 221 GNFTMSNEGQLVTTEGHEVEGNAGAITFNEAQLMAAENIQITDKGEILLDGVVVDQIQIV 280 Query: 162 SVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221 +++ + + S V +G+LE+SN NS+ EM +MI + + Sbjct: 281 NINNVKDLRKHGQSYYYGEEGFELELAPFEGEVLQGYLEESNINSIQEMVEMISTFRDYE 340 Query: 222 SITTLIDENEKSMLEAIRNIA 242 + ++ ++ + +A+ I Sbjct: 341 ANQKVVQAYDEILQKAVGEIG 361 Score = 84.9 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 30/204 (14%), Positives = 62/204 (30%), Gaps = 10/204 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + +++L ++N++N +T GF+ V + I+ I Sbjct: 1 MFRGLYTATSGMQTAQRKLDVTSNNIANINTTGFKKDVVAAESFPEVLIRKINHDIRPRP 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + + G D +F +E+ +GI R+ F +DG L + Sbjct: 61 FNLNSGVEVTREGEALGLSTDA-----GFFRVETDQGISHNREASFAPDEDGFLRTYRRD 115 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 AS + + G + + T G + + R + Sbjct: 116 LNGEIDASRGNYLLDATGQRVQVDNGNLEVNNQGQLTFG----GGATNLLYRPLGHVLGT 171 Query: 181 IPPTPLEDLSGVTVKRGFL-EDSN 203 + +G + E +N Sbjct: 172 MNSGVRIQKIETNFAQGAVAETAN 195 >gi|261821154|ref|YP_003259260.1| flagellar basal body rod protein FlgF [Pectobacterium wasabiae WPP163] gi|261605167|gb|ACX87653.1| flagellar basal-body rod protein FlgF [Pectobacterium wasabiae WPP163] Length = 251 Score = 116 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 47/252 (18%), Positives = 94/252 (37%), Gaps = 13/252 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + ++ + A+N++N T GFR V + + V Sbjct: 1 MDHAIYTAMGGASQSLEKQAITANNLANASTPGFRAQLSALRAV--PVNGLTLPTRTLVV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119 + G TG +D AL ++W A+++ G TR+G +++ DG ++ G Sbjct: 59 ASTPGADMTEGVMNYTGRAMDVALPKESWLAVQTANGGEAYTRNGNMEISADG-QLTIQG 117 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEIS--QKGKVIATMGLYSVDMSQGFVRRENS-- 175 + + D + I + I G ++ IA +G + + G + Sbjct: 118 RVVMGDGGPIDIPPQAQISISPDGTISALNAGDPPNTIAQLGRLKLVKATGQEVERSDDG 177 Query: 176 -----GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + L++ V + G +E SN N++ M MI ++F +I Sbjct: 178 LFRLTQQAQQQRGNVLQNDPTVRIMPGVIEGSNVNTVDTMVDMIANARRFEMQMKVISSV 237 Query: 231 EKSMLEAIRNIA 242 + + A + +A Sbjct: 238 DDNAQRANQILA 249 >gi|317133466|ref|YP_004092780.1| flagellar hook-basal body protein [Ethanoligenens harbinense YUAN-3] gi|315471445|gb|ADU28049.1| flagellar hook-basal body protein [Ethanoligenens harbinense YUAN-3] Length = 234 Score = 116 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 46/249 (18%), Positives = 94/249 (37%), Gaps = 24/249 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M +F G A+ + + + +A++++N +T G+ FS+++ + Sbjct: 1 MIQAFFGGAASLRSRQTAMDVIANDIANVNTAGYVQRDTDFSDLLYDSMVRPENPSYANE 60 Query: 56 --ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDG 112 S GSF+ TG+ L+FA G+ +FA+ +G++ TRDG F + Sbjct: 61 LEGSGAGVDAVVADASAGSFVQTGSLLNFAPRGEGFFAVRDAQGVVSYTRDGTFTAQPE- 119 Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172 +G ++D + + Q G G+++ Q Sbjct: 120 -----NGAAVLVDAQG--------RTVLDAQGNAIAVQNGVPQTQPGVFAFAFPQNLTAL 166 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 S + + + V +G E SN + EMG MI + F ++ ++ Sbjct: 167 GGSLFAASASSGAAQVSDEG-VLQGAYETSNVDLSSEMGNMIVTQRGFQMNARVVSTADQ 225 Query: 233 SMLEAIRNI 241 + + ++ Sbjct: 226 -IESYVNDL 233 >gi|84502378|ref|ZP_01000514.1| putative flagellar basal-body rod protein flgF [Oceanicola batsensis HTCC2597] gi|84389190|gb|EAQ01987.1| putative flagellar basal-body rod protein flgF [Oceanicola batsensis HTCC2597] Length = 250 Score = 116 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 53/246 (21%), Positives = 114/246 (46%), Gaps = 3/246 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND-IDQKISFV 59 M + + L+ A+++ L A+N++N +T GF+ ++ F+ + + + + +FV Sbjct: 1 MDNTTYVALSLARAMKRDLDVTANNIANANTAGFKAERIIFASYLHQDEGQRVGEGTNFV 60 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP-RGIILTRDGRFKVTDDGSLVSAS 118 YL K G+ T LD A++G+A+ + P RDG+ + DG LV+ S Sbjct: 61 VDQGSYLDKTQGAMTRTDNPLDLAIKGEAFLSYRMPGGQTAYGRDGQLALDRDGYLVTLS 120 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178 G + + P +I + S + V+ +GL+ + Q ++R NS + Sbjct: 121 GARVLDEGGGDIAIPPGAGKILISPDGTIASDETGVLGRVGLFDLPDVQSYIRLGNSMLV 180 Query: 179 PNIPPTPLEDLSGVT-VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 P + + + +G +E SN + + E+ +++ + + ++ T L+ ++ + Sbjct: 181 PPEGREGQATAAEGSEILQGQIELSNVSPVAEVTRLMMIQKAYDRATKLMSTEDELRKDM 240 Query: 238 IRNIAS 243 +R + S Sbjct: 241 LRRLGS 246 >gi|253688971|ref|YP_003018161.1| flagellar basal-body rod protein FlgF [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251755549|gb|ACT13625.1| flagellar basal-body rod protein FlgF [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 251 Score = 116 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 93/252 (36%), Gaps = 13/252 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + ++ + A+N++N T GFR V + + V Sbjct: 1 MDHAIYTAMGGASQSLEKQAITANNLANASTPGFRAQLSALRAV--PVNGLTLPTRTLVV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119 + G TG +D AL ++W A+++ G TR+G ++ DG ++ G Sbjct: 59 ASTPGADMTEGVMNYTGRAMDVALPKESWLAVQTANGGEAYTRNGNMEINADG-QLTIQG 117 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQ--KGKVIATMGLYSVDMSQGFVRRENS-- 175 + + D + + + I G ++ IA +G + + G + Sbjct: 118 RVVMGDGGPIDVPPQAQISISADGTISALNPGDPPNTIAQLGRLKLVKATGQEVERSDDG 177 Query: 176 -----GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + L++ V + G +E SN N++ M MI ++F +I Sbjct: 178 LFRLTQQAQQQRGNVLQNDPTVRIMPGVIEGSNVNTVDTMVDMIANARRFEMQMKVISSV 237 Query: 231 EKSMLEAIRNIA 242 + + A + +A Sbjct: 238 DDNAQRANQILA 249 >gi|315179627|gb|ADT86541.1| flagellar basal-body rod protein FlgF [Vibrio furnissii NCTC 11218] Length = 243 Score = 116 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 45/242 (18%), Positives = 93/242 (38%), Gaps = 4/242 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + + ++N+SN DT GFR + V ++ + V Sbjct: 1 MDSLLFTATSGASRVLKAQHVRSNNLSNADTAGFRADMERVRSV--PLQGSGFDGRTMVV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119 + + G + TG LD A+ GD + +++P G TR G V +G+L Sbjct: 59 TNSAATRFDSGDVVKTGRPLDVAVMGDGYLTVQTPEGGEAYTRAGNIAVDVNGALSINGF 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 + A V + + G I L V + +++E+ + Sbjct: 119 AVMGENGALVLPDFQKVEVSERGRISVIPPGGGAEIEVGTLKLVKANDNPLQKESDSLLH 178 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + PL + V + +E SN +++ E+ ++ LT+ F ++ +++ +A Sbjct: 179 TVDGVPLAADNSVQLAPEHIEGSNVSAIDELLNVMSLTRNFEMQIRMMKTA-ETLAQAGN 237 Query: 240 NI 241 + Sbjct: 238 KL 239 >gi|260767924|ref|ZP_05876858.1| flagellar basal-body rod protein FlgF [Vibrio furnissii CIP 102972] gi|260615954|gb|EEX41139.1| flagellar basal-body rod protein FlgF [Vibrio furnissii CIP 102972] Length = 243 Score = 116 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 45/242 (18%), Positives = 93/242 (38%), Gaps = 4/242 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + + ++N+SN DT GFR + V ++ + V Sbjct: 1 MDSLLFTATSGASRVLKAQHVRSNNLSNADTAGFRADMERVRSV--PLQGSGFDGRTMVV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119 + + G + TG LD A+ GD + +++P G TR G V +G+L Sbjct: 59 TNSAATRFDTGDVVKTGRPLDVAVMGDGYLTVQTPEGGEAYTRAGNIAVDVNGALSINGF 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 + A V + + G I L V + +++E+ + Sbjct: 119 AVMGENGALVLPDFQKVEVSERGRISVIPPGGGAEIEVGTLKLVKANDNPLQKESDSLLH 178 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + PL + V + +E SN +++ E+ ++ LT+ F ++ +++ +A Sbjct: 179 TVDGVPLAADNSVQLAPEHIEGSNVSAIDELLNVMSLTRNFEMQIRMMKTA-ETLAQAGN 237 Query: 240 NI 241 + Sbjct: 238 KL 239 >gi|238919260|ref|YP_002932775.1| flagellar basal-body rod protein FlgF, [Edwardsiella ictaluri 93-146] gi|238868829|gb|ACR68540.1| flagellar basal-body rod protein FlgF, putative [Edwardsiella ictaluri 93-146] Length = 251 Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats. Identities = 50/253 (19%), Positives = 85/253 (33%), Gaps = 18/253 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + A+NM+N+ T GFR V + + + V Sbjct: 1 MDHAIYTAMDAASQTLNLQAVAANNMANSTTPGFRAQLAAMRAV--PVDGESLDTRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119 + +G F TG LD AL+ D W S TRDG +++ DG +++ G Sbjct: 59 ASTPMNDLSMGRFDYTGRPLDVALQQDGWLELQMSNGTEAYTRDGNLQISPDG-MLTVEG 117 Query: 120 KYPVLDMASVPIQIPQKDEIF-----------NVGEKGEISQKGKVIATMGLYSVDMSQG 168 + D + + + I + + K++ V G Sbjct: 118 HPVMGDNGPISVPDRAQLTIAADGTITALGAGDNPNATTQIGRLKLVKATASEVVHGDDG 177 Query: 169 FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228 S + L V V G LE SN + M MI ++F +I Sbjct: 178 LF--HLSAEAEQKRGASLPLDPTVKVMPGVLEGSNVQPVEAMISMISNARRFEMQMKVIR 235 Query: 229 ENEKSMLEAIRNI 241 + + +A + Sbjct: 236 SVDDNEQKA-NQL 247 >gi|251799753|ref|YP_003014484.1| flagellar basal body rod protein [Paenibacillus sp. JDR-2] gi|247547379|gb|ACT04398.1| flagellar basal body rod protein [Paenibacillus sp. JDR-2] Length = 288 Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats. Identities = 46/286 (16%), Positives = 93/286 (32%), Gaps = 44/286 (15%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKN------- 50 M A A ++R T+ +N++N +T G++ F E++ ++ Sbjct: 1 MLRGLYTAAAGMTAQQRRHDTITNNITNINTPGYKQTYAVTRSFPEMLLSLTGVDQKDEK 60 Query: 51 DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA---------------------- 88 I + + V + + G + TG DFAL + Sbjct: 61 QIGKVSTGVFAEESLAIHLQGDLMQTGKSSDFALVSNIDVPGMAFDASGKYVSPDGDVTF 120 Query: 89 -----WFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVG 143 + + I TR G F +T DG LV+ G + + Sbjct: 121 QPQAFFTLQDKNGEIRYTRGGSFTLTSDGFLVAGDGSNVLGADGNPIQFPQGVSLDGLTL 180 Query: 144 EKGEISQKGKVIATMGLY----SVDMSQGFVRRENS---GISPNIPPTPLEDLSGVTVKR 196 + K A G +D R + P+ V V++ Sbjct: 181 TADQRFVDAKTGADSGRQLLLTRIDNPNELAREGDGKFRLAGDAQDARPVVAGERVEVRQ 240 Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G++E SN ++ ++ + + + +I ++S+ +A+ + Sbjct: 241 GYVERSNVDAAQSSVDLMAALRAYEANQKVIQFYDESLDKAVNQVG 286 >gi|261339377|ref|ZP_05967235.1| flagellar basal-body rod protein FlgF [Enterobacter cancerogenus ATCC 35316] gi|288318178|gb|EFC57116.1| flagellar basal-body rod protein FlgF [Enterobacter cancerogenus ATCC 35316] Length = 251 Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats. Identities = 49/253 (19%), Positives = 85/253 (33%), Gaps = 15/253 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V ++ + V Sbjct: 1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G T LD AL+ D W A+++ TR+G +V+ G L Sbjct: 59 ASTPGADMTPGQMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGNIQVSATGQL--TIQ 116 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 +PV+ A + G T+ V V+R + Sbjct: 117 GHPVMGEAGPLTVPEGSELTIAADGTVSALNPGDPANTVAPVGRLKLVKADAREVQRGDD 176 Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 G+ L+ + V G LE SN + M MI ++F +I Sbjct: 177 GMFRLTQATQATRGATLQADPSIRVMSGVLEGSNVKPVEAMTDMIASARRFEMQMKIISS 236 Query: 230 NEKSMLEAIRNIA 242 +++ +A + +A Sbjct: 237 VDENANKANQLLA 249 >gi|296134367|ref|YP_003641614.1| fagellar hook-basal body protein [Thermincola sp. JR] gi|296032945|gb|ADG83713.1| fagellar hook-basal body protein [Thermincola potens JR] Length = 362 Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats. Identities = 35/194 (18%), Positives = 76/194 (39%), Gaps = 17/194 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + L + + ++A+N++N +T G++ +V+F +++ + Sbjct: 1 MLQALWSASSGMLGQQLAMDSIANNLANVNTTGYKKSRVEFQDLLYSEMRAPGKKTLRGE 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V + G T LD A+EG+A+FA+ P + TRDG F Sbjct: 61 IIPTGFQTGNGVRPAGTPVIFGQGIIQQTDNPLDLAIEGNAFFAVRRPDGSLAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 K+ G+LV+A G + + + + + + + + + + + Sbjct: 121 KLDAKGTLVTADGSKVLDENLNPLTFDSPQSLKIDNAGAILEQ---QAVGRIPGFVFEAA 177 Query: 167 QGFVRRENSGISPN 180 + E+ P Sbjct: 178 DKLEKVEDGYFRPT 191 Score = 86.1 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 21/156 (13%), Positives = 54/156 (34%), Gaps = 9/156 (5%) Query: 88 AWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGE 147 + L + T++ + V +G L++ G V + + D + ++G Sbjct: 211 YFQVLLPDGKVAYTKETQVSVDKNGRLITEKGYPIV-----PEVYLRLADGSVTLDKEGN 265 Query: 148 ISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV--TVKRGFLEDSNAN 205 ++ + + L G + ++ + ++ T++ LE SN Sbjct: 266 LT-AAVQVGKLRLVKFVNPAGLNKIGSNMYAESVNSGAATVAGPADYTLRSSALEGSNVE 324 Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 EM MI + + + I +++ + + Sbjct: 325 VAEEMVNMIIANRAYELSSRSIRTSDEMLG-MANQL 359 >gi|311033282|ref|ZP_07711372.1| hypothetical protein Bm3-1_22549 [Bacillus sp. m3-13] Length = 280 Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats. Identities = 46/281 (16%), Positives = 91/281 (32%), Gaps = 39/281 (13%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M L+++L ++ N++N DTVG++ F E++ N+ Sbjct: 1 MNRIMLNATNTMNQLQKQLDLISHNVANVDTVGYKQRSASFQELLAQQSNNQPLAQYDNQ 60 Query: 54 ---------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-----PRGII 99 + S K L G +T LDFAL + F Sbjct: 61 TARQSELGIRVGSGSGLSKTQLHLTQGPMKATDRMLDFALTKENQFFTVQVTENGQTSTQ 120 Query: 100 LTRDGRFKVTDDG----SLVSASGKYPVLDMASV---PIQIPQKDEIFNVGEKGEISQKG 152 TR+G F ++ LV++ G + P + + + ++ Sbjct: 121 FTRNGVFYLSPVNNAEVMLVTSEGHPVLDSDEQPIILPENVKEVKLQESGILSAVMTDGQ 180 Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV----------TVKRGFLEDS 202 + +G+ V Q R S + ++ +++G LE S Sbjct: 181 AIARELGVAEVIRPQMLEARPGSLYALPPENVANQESVVGFLQGGARQDIRMQQGMLEQS 240 Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 N + EM +M + + + + ++ M + + S Sbjct: 241 NVDLASEMTEMTLMQRSYQFNAKSVQFADQMMG-LVNGLKS 280 >gi|16760054|ref|NP_455671.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29142175|ref|NP_805517.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213161843|ref|ZP_03347553.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213424681|ref|ZP_03357446.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213582038|ref|ZP_03363864.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213613180|ref|ZP_03371006.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213648927|ref|ZP_03378980.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213865504|ref|ZP_03387623.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|289828579|ref|ZP_06546404.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25298925|pir||AC0640 probable flagellar basal-body rod protein FlgF (proximal rod protein) STY1217 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16502348|emb|CAD08302.1| putative flagellar basal-body rod protein FlgF (proximal rod protein) [Salmonella enterica subsp. enterica serovar Typhi] gi|29137805|gb|AAO69366.1| putative flagellar basal-body rod protein FlgF [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 251 Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats. Identities = 43/252 (17%), Positives = 73/252 (28%), Gaps = 16/252 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V + + V Sbjct: 1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVDGLSLATRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTD------DGS 113 + G T LD AL+ D W +++ TR+G +V G Sbjct: 59 ASTPGADMTQGQLDYTSRPLDVALQQDGWLVVQAADGAEGYTRNGNIQVGPTGQLTIQGH 118 Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG----KVIATMGLYSVDMSQGF 169 V G + S + K++ G G Sbjct: 119 PVIGEGGPITVPEGSEITIAADGTISALNPGDPPNTVAPVGRLKLVKAEGNEVQRSDDGL 178 Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 R + L + + G LE SN + M MI ++F +I Sbjct: 179 FRLTAEAQAE--RGAVLAADPSIRIMSGVLEGSNVKPVEAMTDMIANARRFEMQMKVITS 236 Query: 230 NEKSMLEAIRNI 241 +++ A + Sbjct: 237 VDENEGRA-NQL 247 >gi|258512706|ref|YP_003186140.1| fagellar hook-basal body protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257479432|gb|ACV59751.1| fagellar hook-basal body protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 262 Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 87/252 (34%), Gaps = 17/252 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV--------------G 46 M GL+ A + +ADN++N T G+ + F++++ Sbjct: 1 MGQMMWNGLSGIQAANAWMDQIADNLANLQTPGYAAEQGTFADLLTMQVYGNATDPSSAA 60 Query: 47 AIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106 + + + V E + + TG A+EG +F +++P G + TR G F Sbjct: 61 RVTPPGWRGGTGVVRTGEERDFSQAAVVRTGIPTHLAIEGPGFFVVQTPSGRMYTRAGNF 120 Query: 107 KVT---DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 + D +++ PVL A PI P V G + A + L + Sbjct: 121 IWSRRSDGSFVLATQTGDPVLSAAGQPIVKPADAPSMTVAPDGTVQFGRGRTAKLALVEI 180 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223 + E +G+ +V +G + SN + M Q++ + Sbjct: 181 GEPSSHLIPEGNGLYRLASGGVAVPARNSSVIQGAVNASNVDETAAMAQLVAAQDFYEEN 240 Query: 224 TTLIDENEKSML 235 I + + Sbjct: 241 AQAISMANQLLG 252 >gi|90415317|ref|ZP_01223251.1| hypothetical protein GB2207_08376 [marine gamma proteobacterium HTCC2207] gi|90332640|gb|EAS47810.1| hypothetical protein GB2207_08376 [marine gamma proteobacterium HTCC2207] Length = 253 Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats. Identities = 46/242 (19%), Positives = 90/242 (37%), Gaps = 9/242 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M L+A + + + + ++N TVGF+ S V ++ + Sbjct: 1 MDKLTYTALSAMQSQSVARAAITNELANVSTVGFKKSFQIASSAVKIDGPGLETRFQPGL 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + ++ G+ +STG LD ++ +++ I TR G KV+ G L +A G Sbjct: 61 QITDVINLTPGTPMSTGRPLDISMNDQTVLGIQTESGDIAYTRRGDLKVSPSGVLENAIG 120 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV----DMSQGFVRRENS 175 + + + + + I G A + + + VRR++ Sbjct: 121 DLIMGEGGPISVPVGNLITISPDGTVFAQLPTEPEAAAVAVGQLMLRDASQTQLVRRQDG 180 Query: 176 GISPNIPPTPLEDLSGV----TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 P +D + +V G LE SN N + M +M+ +++F L+ E + Sbjct: 181 LFEPRDEALKGQDFNSGPLAVSVLPGMLEGSNVNPVGTMIKMLDFSRQFEMQLKLVKETQ 240 Query: 232 KS 233 Sbjct: 241 SI 242 >gi|197251378|ref|YP_002146865.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197215081|gb|ACH52478.1| flagellar basal-body rod protein FlgF [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 251 Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats. Identities = 45/252 (17%), Positives = 77/252 (30%), Gaps = 16/252 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V + + V Sbjct: 1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVDGLSLATRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G T LD AL+ D W +++ TR+G +V G L Sbjct: 59 ASTPGADMTPGQLDYTSRPLDVALQQDGWLVVQAADGAEGYTRNGNIQVGPTGQL--TIQ 116 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 +PV+ + G T+ V V+R + Sbjct: 117 GHPVIGEGGPITVPEGSEITIAADGTISALNPGDPPNTVAPVGRLKLVKAEGNEVQRSDD 176 Query: 176 GISPNIPPTPLEDL------SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 G+ E + + G LE SN + M MI ++F +I Sbjct: 177 GLFRLTAEAQAERGAVLAANPSIRIMSGVLEGSNVKPVEAMTDMIANARRFEMQMKVITS 236 Query: 230 NEKSMLEAIRNI 241 +++ A + Sbjct: 237 VDENEGRA-NQL 247 >gi|309779448|ref|ZP_07674209.1| flagellar basal-body rod protein FlgF [Ralstonia sp. 5_7_47FAA] gi|308921689|gb|EFP67325.1| flagellar basal-body rod protein FlgF [Ralstonia sp. 5_7_47FAA] Length = 245 Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats. Identities = 48/244 (19%), Positives = 94/244 (38%), Gaps = 6/244 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M S + + L + + A+N++N T GF+ F V ++ + S+V Sbjct: 1 MDRSIYVSMTGVKHLFDQQAASANNLANASTTGFKAQIDAFHTV--GVQGEGSPTRSYVM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119 + G +TG LD A++G +FA+++P G TR G F++ DG++ + SG Sbjct: 59 ASAIGTDLAPGPIETTGRSLDVAIDGQGFFAVQTPDGGEAYTRAGTFQLGPDGTIQTLSG 118 Query: 120 KYPVLDMASV--PIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177 + + D + P + + ++ L V + + R G+ Sbjct: 119 QPVLGDGGPITLPPNTTVQFAKDGTVNAISADSRTPPVSLGRLKLVSIDPANIDRGADGL 178 Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 V + G LE SN N + MI ++++ + ++ + A Sbjct: 179 FRQRDGQDAGVDEKVRITGGALEGSNVNLTDSLVNMIEISRQLEMQMKSLHTSDTNAQSA 238 Query: 238 IRNI 241 + Sbjct: 239 -NEL 241 >gi|50120640|ref|YP_049807.1| flagellar basal body rod protein FlgF [Pectobacterium atrosepticum SCRI1043] gi|49611166|emb|CAG74612.1| flagellar basal-body rod protein [Pectobacterium atrosepticum SCRI1043] Length = 251 Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats. Identities = 47/252 (18%), Positives = 93/252 (36%), Gaps = 13/252 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + ++ + A+N++N T GFR V + + V Sbjct: 1 MDHAIYTAMGGASQSLEKQAITANNLANASTPGFRAQLSALRAV--PVNGLTLPTRTLVV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119 + G TG +D AL ++W A+++ G TR+G ++ DG ++ G Sbjct: 59 ASTPGADMTEGVMNYTGRAMDVALPKESWLAVQTANGGEAYTRNGNMEINADG-QLTIQG 117 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEIS--QKGKVIATMGLYSVDMSQGFVRRENS-- 175 + + D + I + I G ++ IA +G + + G + Sbjct: 118 RVVMGDGGPIDIPPQAQISISADGTISALNAGDPPNTIAQLGRLKLVKATGQEVERSDDG 177 Query: 176 -----GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + L++ V + G +E SN N++ M MI ++F +I Sbjct: 178 LFRLTQQAQQQRGNVLQNDPTVRIMPGVIEGSNVNTVDTMVDMIANARRFEMQMKVISSV 237 Query: 231 EKSMLEAIRNIA 242 + + A + +A Sbjct: 238 DDNAQRANQILA 249 >gi|238785496|ref|ZP_04629479.1| Flagellar basal-body rod protein flgF [Yersinia bercovieri ATCC 43970] gi|238713598|gb|EEQ05627.1| Flagellar basal-body rod protein flgF [Yersinia bercovieri ATCC 43970] Length = 251 Score = 114 bits (286), Expect = 7e-24, Method: Composition-based stats. Identities = 42/251 (16%), Positives = 83/251 (33%), Gaps = 11/251 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A+N++N T GFR V I + V Sbjct: 1 MDHAIYTAMGAARQSLDQQAVTANNLANASTPGFRAQLSAMRAV--PIDGPSMATRTMVV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSA-- 117 + + G+ +G LD AL+ D + A++ P TR+G +V +G + Sbjct: 59 ASTPGVDISQGTINFSGRPLDVALQQDGYLAVQLPDGTEAYTRNGNIQVAANGQMTVQGY 118 Query: 118 --SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 G +++ D + G+ + + + + Sbjct: 119 PLMGDNGPIEVPPQAAVTIAADGTISALNAGDSPNTIAQLGQIKRVRATPGEVMHGDDGL 178 Query: 176 GISPNIP----PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 L + + + G LE SN ++ M MI + F +I + Sbjct: 179 FHLTPATQQARGAQLANDPLIKIMPGVLEGSNVKAVEAMTDMIANARSFEMQMKIIHSVD 238 Query: 232 KSMLEAIRNIA 242 ++ A + +A Sbjct: 239 ENEQRANQLLA 249 >gi|153946948|ref|YP_001399635.1| flagellar basal body rod protein FlgF [Yersinia pseudotuberculosis IP 31758] gi|152958443|gb|ABS45904.1| flagellar basal-body rod protein FlgF [Yersinia pseudotuberculosis IP 31758] Length = 243 Score = 114 bits (286), Expect = 7e-24, Method: Composition-based stats. Identities = 51/244 (20%), Positives = 95/244 (38%), Gaps = 8/244 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M ++ + A+N++NT+T GFR + V Sbjct: 1 MDKLLYTAVSGANRSLSQQQIHANNLANTNTQGFRADLE--KATATQVMGSGYNSRVAVL 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 S + S TG +LD A++ A+ S + TR+G+ +V+ DG ++ +G Sbjct: 59 SQNAGVDMTPASLQETGRDLDIAVKNQGLIAVLSGGREVYTRNGQMEVSADGD-LTINGL 117 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRRENSGI 177 + D + + I + G I Q G + + VD+ +R+ N G+ Sbjct: 118 PVLGDGGPIVLPPYSALSIADDGTIAIIPQAGGIKTPEEIERIKLVDIPANQLRKNNRGL 177 Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + P V V LE SN +++ EM I L+++F + ++ E + +A Sbjct: 178 LVSNRG-PAARDEAVQVVNKHLESSNVSAISEMIASISLSRQFEAQIKMMKVAED-LAQA 235 Query: 238 IRNI 241 + Sbjct: 236 GNRM 239 >gi|89072314|ref|ZP_01158893.1| putative flagellar basal-body rod protein [Photobacterium sp. SKA34] gi|89051846|gb|EAR57298.1| putative flagellar basal-body rod protein [Photobacterium sp. SKA34] Length = 243 Score = 114 bits (286), Expect = 7e-24, Method: Composition-based stats. Identities = 44/242 (18%), Positives = 90/242 (37%), Gaps = 4/242 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + + ++N+SN DT GFR + + ++ + V Sbjct: 1 MDSFLYTATSGASRVMKAQHVRSNNLSNADTAGFRADMERVKSI--PLQGAGFDGRTMVV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119 + + G I TG LD A+ GD +F +++ TR G +V D G + Sbjct: 59 TNSAATRFDAGDVIKTGRALDIAINGDGFFTVQTVAGNEAYTRAGNIRVDDQGMMRVNGF 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 A V + D G + L V+ +++++ G+ Sbjct: 119 PLMSEGEALVLPEHQAVDISDKGVVSIVPLGGGAELEVGQLKLVNPEFNQLQKQSDGLLH 178 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + V + G LE SN +++ E+ ++ LT+ F ++ +++ +A Sbjct: 179 PVNDQFFAQDPSVAMTAGHLEGSNVSAINELVSVMSLTRNFEMQVRMMKTA-ETLAQAGT 237 Query: 240 NI 241 + Sbjct: 238 RL 239 >gi|238793999|ref|ZP_04637617.1| Flagellar basal-body rod protein flgF [Yersinia intermedia ATCC 29909] gi|238726631|gb|EEQ18167.1| Flagellar basal-body rod protein flgF [Yersinia intermedia ATCC 29909] Length = 251 Score = 114 bits (286), Expect = 8e-24, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 87/252 (34%), Gaps = 13/252 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A ++ + A+N++N T GFR V I + V Sbjct: 1 MDHAIYTAMGAARQSLEQQAVTANNLANASTPGFRAQLSAMRAV--PIDGPSMATRTMVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + G+ +G LD AL+ D + A++ P TR+G +V +G + + G Sbjct: 59 ASTPGVDISQGTMNYSGRPLDVALQQDGYLAVQLPDGTEAYTRNGNIQVAANGQM-TVQG 117 Query: 120 KYPVLDM---ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + D P + + + V + G V + G Sbjct: 118 YPLMGDNGPIEVPPQAAVTIAADGTISALNAGDSPNTIAQLGQIKRVRANAGEVMHGDDG 177 Query: 177 IS------PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + L + + + G LE SN ++ M MI + F +I Sbjct: 178 LFHLTPATQQARGAQLANDPLIKIMPGVLEGSNVKAVEAMTDMIANARSFEMQMKVIHSV 237 Query: 231 EKSMLEAIRNIA 242 +++ A + +A Sbjct: 238 DENEQRANQLLA 249 >gi|84514825|ref|ZP_01002188.1| flagellar basal-body rod protein FlgG [Loktanella vestfoldensis SKA53] gi|84510984|gb|EAQ07438.1| flagellar basal-body rod protein FlgG [Loktanella vestfoldensis SKA53] Length = 273 Score = 114 bits (286), Expect = 8e-24, Method: Composition-based stats. Identities = 42/267 (15%), Positives = 82/267 (30%), Gaps = 37/267 (13%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI---DQKISFVASGKEYL 66 + ++ V++N++N+ T FR FS++ D K Sbjct: 7 SGMATSMFEIAVVSNNVANSGTTAFRKSNTSFSDLYSGGSADSVARLSKGVGSIVDGTKQ 66 Query: 67 SKEVGSFISTGTELDFALEGDAWFALESPRGII-------LTRDGRFKVTDDGSLVSASG 119 S E G ++ L+ AL G F +P TRDG F + DG L +++ Sbjct: 67 STEQGGLLTRDGVLNLALIGKGMFVSAAPSATAGAIGTISYTRDGEFSLDKDGQLRTSTN 126 Query: 120 KYPVL----------------------DMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157 + + D + S +++ T Sbjct: 127 DFVMGYGPGVTPAEATPLVNLKVPVKKDGDGGAQLTALEIGTDGKLMATYGSAPAELLGT 186 Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQ 212 + + S + + + ++ G LE SN + E+ Sbjct: 187 IAIASFPNEIALRQIGMNRFLATDGAGTPKIGVGGQDGFGMIQSGTLETSNVDLTIELTD 246 Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIR 239 MI Q+F+ + ++ + + R Sbjct: 247 MIRAQQQFSGSSRILQTYSDMIEKLTR 273 >gi|294853175|ref|ZP_06793847.1| flagellar basal-body rod protein FlgG [Brucella sp. NVSL 07-0026] gi|294818830|gb|EFG35830.1| flagellar basal-body rod protein FlgG [Brucella sp. NVSL 07-0026] Length = 210 Score = 114 bits (286), Expect = 8e-24, Method: Composition-based stats. Identities = 38/194 (19%), Positives = 65/194 (33%), Gaps = 7/194 (3%) Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSL 114 V + GSF TG D AL G WF ++SP + TR G F DG L Sbjct: 17 GLGVQTAAVRNLHIQGSFNQTGNPYDVALTGRGWFQIQSPTGETLYTRAGAFNKNADGQL 76 Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGE-KGEISQKGKVIATMGLYSVDMSQGFVRRE 173 V+ G + P I K + + + L + G Sbjct: 77 VTLDGNPVEPAITIPPDAIEVTITDTGQVFAKLQDQINQVDLGQLTLANFTNEAGLEPLG 136 Query: 174 NSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228 + ++K+G+LE SN + + E+ +I + + + +I Sbjct: 137 GNLYRETEASGGPLVGVPGDPGYGSIKQGYLEASNVDPVKEITDLITAQRAYEMNSKVIQ 196 Query: 229 ENEKSMLEAIRNIA 242 ++ +N+ Sbjct: 197 AADEMAATVSKNLR 210 >gi|317130722|ref|YP_004097004.1| flagellar hook-basal body protein [Bacillus cellulosilyticus DSM 2522] gi|315475670|gb|ADU32273.1| flagellar hook-basal body protein [Bacillus cellulosilyticus DSM 2522] Length = 279 Score = 114 bits (286), Expect = 9e-24, Method: Composition-based stats. Identities = 49/276 (17%), Positives = 95/276 (34%), Gaps = 36/276 (13%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 S ++++L TV +N++N +T G++ V FS+++ N+ Sbjct: 5 NQSMITSAVTMGQMQRKLDTVGNNLANLNTTGYKRRDVSFSDLLFQQVNNQRDAHHEIGR 64 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI---ILTRDG 104 + S A G+ + E G+ +T ELD AL + +P TRDG Sbjct: 65 TTPNGIRVGSGSAVGQTAVRMEQGALRTTERELDIALTEKGYLFELAPAEDGTRRFTRDG 124 Query: 105 RFKV------TDDGSLVSASGKYPVLDMASVP----IQIPQKDEIFNVGEKGEISQKGKV 154 F + +V+ +G Y + + + + + Sbjct: 125 AFYFSPNPDVDGENFIVNQNGDYVLGSDGNPIAVPGHYESLRITDEGAILVTLDNGESVA 184 Query: 155 IATMGLYSVDMSQGFVRRENSGI-SPNIPPTPLEDLSGVT-------VKRGFLEDSNANS 206 + + L V Q ++ PN+ L + +G LE SN + Sbjct: 185 VGELQLVQVTKPQLLTSLGDNMYVFPNLEELGLAFGDVLNEAAGAQVFSQGMLEQSNVDM 244 Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 EM +M+ + + + I ++ M + I Sbjct: 245 GREMTEMMLTQRNYQFNSRAISIADEMMG-LVNTIR 279 >gi|257876010|ref|ZP_05655663.1| flagellar basal-body rod protein flgG [Enterococcus casseliflavus EC20] gi|257810176|gb|EEV38996.1| flagellar basal-body rod protein flgG [Enterococcus casseliflavus EC20] Length = 260 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 41/245 (16%), Positives = 84/245 (34%), Gaps = 16/245 (6%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA---------IKNDIDQK 55 I + L+ L T A+N++N +T G++ F ++ N Sbjct: 7 LGISRSGLNHLQTNLDTTANNIANVNTNGYQAQTTHFQALMENAIGAEETLFNGNAAQYG 66 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSL 114 S A S G+ T LD A++G+ +F + G +L +R G F ++++ L Sbjct: 67 ASMGAKATTTTSFAQGNLAGTTQPLDLAIQGNGFFGVRDQTGQLLLSRAGNFHLSENKQL 126 Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174 V++ G + Q P +I +++ +G ++ Sbjct: 127 VNSEGYPVAMTTNVPTPQWPDAQQIAIDASGQLTTEENGQTRVLGQLTLYQPTNTENITP 186 Query: 175 SGISPNIPPTP------LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228 G + +V +G LE S + M ++ + + T + Sbjct: 187 VGNQLYRAGDQALLTSQTNPAAFGSVLQGQLEQSTVDLATSMTDLLTTQRAYGLNTKAMQ 246 Query: 229 ENEKS 233 ++ Sbjct: 247 TADEM 251 >gi|257866397|ref|ZP_05646050.1| flagellar basal-body rod protein flgG [Enterococcus casseliflavus EC30] gi|257873087|ref|ZP_05652740.1| flagellar basal-body rod protein flgG [Enterococcus casseliflavus EC10] gi|257800355|gb|EEV29383.1| flagellar basal-body rod protein flgG [Enterococcus casseliflavus EC30] gi|257807251|gb|EEV36073.1| flagellar basal-body rod protein flgG [Enterococcus casseliflavus EC10] Length = 260 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 41/245 (16%), Positives = 84/245 (34%), Gaps = 16/245 (6%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA---------IKNDIDQK 55 I + L+ L T A+N++N +T G++ F ++ N Sbjct: 7 LGISRSGLNHLQTNLDTTANNIANVNTNGYQAQTTHFQALMENAIGAEETLFNGNAAQYG 66 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSL 114 S A S G+ T LD A++G+ +F + G +L +R G F ++++ L Sbjct: 67 ASMGAKATTTTSFAQGNLAGTAQPLDLAIQGNGFFGVRDQTGQLLLSRAGNFHLSENKQL 126 Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174 V++ G + Q P +I +++ +G ++ Sbjct: 127 VNSEGYPVAMTTNVPTPQWPDAQQIAIDASGQLTTEENGQTRVLGQLTLYQPTNTENITP 186 Query: 175 SGISPNIPPTP------LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228 G + +V +G LE S + M ++ + + T + Sbjct: 187 VGNQLYRAGDQALLTSQTNPAAFGSVLQGQLEQSTVDLATSMTDLLTTQRAYGLNTKAMQ 246 Query: 229 ENEKS 233 ++ Sbjct: 247 TADEM 251 >gi|114570496|ref|YP_757176.1| flagellar basal body rod protein [Maricaulis maris MCS10] gi|114340958|gb|ABI66238.1| flagellar basal body rod protein [Maricaulis maris MCS10] Length = 249 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 64/247 (25%), Positives = 113/247 (45%), Gaps = 5/247 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFR--TIKVKFSEVVGAIKNDIDQKISF 58 M + IGL+ Q+ L + + VA+N++N +T GF+ ++ ++ A +D I F Sbjct: 1 MDNAMMIGLSRQMTLRRSMDVVANNIANANTAGFKVESLLLENRAAPTATHDDGPADIQF 60 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSAS 118 V + G TG E D A++G +FA+ES TRDGRF++ G LV++ Sbjct: 61 VNTWGMARDFRQGELAFTGREFDLAIDGGGFFAVESNGEEQFTRDGRFRLDGAGQLVASD 120 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178 G + PI I + E G I Q + I +G++ + ++ N + Sbjct: 121 GAPVLDADTRGPILIDASAGSVQIVEGGMIMQNDQQIGRIGVFEIANRSEMSKQGNGRYT 180 Query: 179 PNIPPTPLEDLS---GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 P + TV +GF+E SN S+ E+ M+ + + + S++ +++ E Sbjct: 181 IPPIEDPANEPLAMIDATVSQGFVEQSNVQSILELTDMMSVMRSYQSVSKFLEQAEDLSK 240 Query: 236 EAIRNIA 242 AI + Sbjct: 241 RAIERLG 247 >gi|325288804|ref|YP_004264985.1| fagellar hook-basal body protein [Syntrophobotulus glycolicus DSM 8271] gi|324964205|gb|ADY54984.1| fagellar hook-basal body protein [Syntrophobotulus glycolicus DSM 8271] Length = 256 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 36/246 (14%), Positives = 80/246 (32%), Gaps = 20/246 (8%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK-------- 63 L+ RL V +N++N +T F+ + E + + + + + Sbjct: 8 MNLLQSRLDMVGNNLANANTTAFKQQLLSEEEGMDTQELSKSRAMYGGVAPGIAADQTAL 67 Query: 64 -----EYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSA 117 G+ + + + A+ G+ +F + + TR G F +G +V+ Sbjct: 68 PVYNGNRFDFSQGTLVQSDQPQNMAISGEGFFQVAAANGRTGYTRAGNFGPDGNGRIVNP 127 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177 G L + + + + + L + G + + Sbjct: 128 QGLLLELGAEIPENA-SDLSIGSDGKITAVVDDELTELGQLTLARFENPHGLQQAGDDIY 186 Query: 178 SPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 P + T ++ G LE SN ++ M MI + + + + ++ Sbjct: 187 LETDQSGPPLTGNPGTEGFGQIQGGMLERSNTDTAKAMSNMIEAQRAYQIEIGITKDQDQ 246 Query: 233 SMLEAI 238 + EAI Sbjct: 247 MIAEAI 252 >gi|260597446|ref|YP_003210017.1| flagellar basal body rod protein FlgF [Cronobacter turicensis z3032] gi|260216623|emb|CBA29919.1| Flagellar basal-body rod protein flgF [Cronobacter turicensis z3032] Length = 252 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 47/253 (18%), Positives = 85/253 (33%), Gaps = 17/253 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + S A N++N T GFR V ++ + V Sbjct: 1 MDHAIYTAMGAASQTLNQQSVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEG-DAWFALESPR-GIILTRDGRFKVTD------DG 112 + ++ GS T LD A++G D W A+++P TR+G + T G Sbjct: 59 ASTPGVNMSQGSLDYTSRPLDVAIQGSDGWLAVQAPDGTEAYTRNGNIQRTATGQLTIQG 118 Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG----KVIATMGLYSVDMSQG 168 + V G V+ + + K++ V G Sbjct: 119 NPVMGEGGPVVVPEGAEVTIAADGTISVLNPGDAPNTIAPVGRLKMVKASAQEVVRGDDG 178 Query: 169 FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228 R + + L+ +++ G LE SN + M MI ++F +I Sbjct: 179 LFRL--NQQAQTARGATLQADPTISLMSGVLEGSNVKPVEAMTDMIANARRFEMQMKIIS 236 Query: 229 ENEKSMLEAIRNI 241 +++ A + Sbjct: 237 SVDENEQRA-NQL 248 >gi|327478810|gb|AEA82120.1| flagellar basal-body rod protein FlgF [Pseudomonas stutzeri DSM 4166] Length = 234 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 45/225 (20%), Positives = 84/225 (37%), Gaps = 2/225 (0%) Query: 9 LAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSK 68 + A L ++N++N +T GFR + V A++ +S Sbjct: 1 MTAASRTMMSLQVRSNNLANVNTPGFRADLERAQAV--AVEGYGYDSRHMALIENNGVSL 58 Query: 69 EVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMAS 128 G ++TG ELDFA++G+ LE G TR G +V +G L Sbjct: 59 AAGPMVATGRELDFAVKGNGLIVLEDGEGEAYTRQGSMQVDAEGRLTLNGRAVLGEGGPI 118 Query: 129 VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED 188 V + + + + + + VD+ + + +G+ P + Sbjct: 119 VLPEYDRMEIGNDGTVSIMAPGDWMMAEVDRIRLVDVPAANLMKNQAGLLVTRDGEPAQP 178 Query: 189 LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 V + GFLE SN +++ E+ + L + F + ++ E Sbjct: 179 SEDVRLASGFLESSNVSAIDELASTMSLNRLFETQVKMMKAAEDL 223 >gi|157694039|ref|YP_001488501.1| flagellar hook-basal body protein [Bacillus pumilus SAFR-032] gi|194016453|ref|ZP_03055067.1| flagellar hook-basal body complex protein FlhP [Bacillus pumilus ATCC 7061] gi|157682797|gb|ABV63941.1| flagellar hook-basal body protein [Bacillus pumilus SAFR-032] gi|194011926|gb|EDW21494.1| flagellar hook-basal body complex protein FlhP [Bacillus pumilus ATCC 7061] Length = 272 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 46/273 (16%), Positives = 103/273 (37%), Gaps = 32/273 (11%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + ++++L +++N++N++T G+R +FSE++ N +D+K + VA Sbjct: 1 MLRTMINAAVSMNEVQKQLDIISNNIANSETTGYRAKNTRFSELIRQQFNQVDEKNAQVA 60 Query: 61 SGKEYL---------------SKEVGSFISTGTELDFALEGD-AWFALESPRGIILTRDG 104 + + + GS TG +LD A + + I TRDG Sbjct: 61 NSRLTPDGLRLGTGTMVNASINSLQGSIKETGRDLDVAFGAPSQYMQVNVGGNIRYTRDG 120 Query: 105 RFK----VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEIS-----QKGKVI 155 + + S +P+LD I + ++ + G ++ + Sbjct: 121 SLYLQPGNNRNQVQLVTSEGHPILDENGNEIVLNANFRDISIDKNGRLTAISRDNQPNQQ 180 Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV------TVKRGFLEDSNANSMYE 209 +G+ V+ S V ++ S + +++G LE SN + E Sbjct: 181 VNLGVVQVNNSSALVSEGDNLFSVDGTYQGALTALNGANRQAIQLQQGALETSNVDMSKE 240 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 + ++ + + + I ++ + + I Sbjct: 241 LTDLMTTQRSYQMNSRTITMGDQMLG-LVNTIR 272 >gi|238788316|ref|ZP_04632110.1| Flagellar basal-body rod protein flgF [Yersinia frederiksenii ATCC 33641] gi|238723562|gb|EEQ15208.1| Flagellar basal-body rod protein flgF [Yersinia frederiksenii ATCC 33641] Length = 251 Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 42/251 (16%), Positives = 83/251 (33%), Gaps = 11/251 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A+N++N T GFR V I + V Sbjct: 1 MDHAIYTAMGAARQSLELQAVTANNLANASTPGFRAQLAAMRAV--PIDGPSMATRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSA-- 117 + + G+ +G LD AL+ D + A++ P TR+G +V +G + Sbjct: 59 ASTPGVDISQGTMNYSGRPLDVALQQDGYLAVQLPDGTEAYTRNGNIQVGANGQMTVQGY 118 Query: 118 --SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 G +++ D + G+ + + + + Sbjct: 119 PLMGDNGPIEVPPQAAVTIAADGTISALNAGDSPNTIAQLGQIKRVRATAGEVMHGDDGL 178 Query: 176 GISPNIP----PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 L + + + G LE SN ++ M MI + F +I + Sbjct: 179 FHLTPAAQQTRGAQLANDPLIKIMPGVLEGSNVKAVEAMTDMIANARSFEMQMKVIHSVD 238 Query: 232 KSMLEAIRNIA 242 ++ A + +A Sbjct: 239 ENEQRANQLLA 249 >gi|84514832|ref|ZP_01002195.1| flagellar proximal rod protein FlgF [Loktanella vestfoldensis SKA53] gi|84510991|gb|EAQ07445.1| flagellar proximal rod protein FlgF [Loktanella vestfoldensis SKA53] Length = 253 Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 43/241 (17%), Positives = 84/241 (34%), Gaps = 8/241 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV-VGAIKNDIDQKISFV 59 M + +I L + L A NM+N + GFR E + ++ Sbjct: 1 MDRNIHIALNNLRNISSELRVNAQNMANANVPGFRADLSVTREASFLTPFDQFRSRVYSQ 60 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRFKVTDDGSLVSA 117 + + S + G +T E+D A++G +F + L+R G D +V Sbjct: 61 EASQSLFSTDEGGLQNTEAEMDLAIQGQGYFYIAPSSGGDTALSRRGDLSFDLDRFVVDG 120 Query: 118 SGKYPVLDMASVPI-----QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172 +G + + +I ++ E + + V + S + Sbjct: 121 AGNKLLDVALNPIQLPPTRRIVVEETGQIQMELLDAPEGTFVAGPIIATSQADDVVLSKS 180 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 + I P E + +GFLE+SN +++ + Q I ++F I ++ Sbjct: 181 PDGHIRPVGQADLPEPDQRARLTQGFLENSNVDTIGSLIQNIESQRQFEMSVKFIALAQE 240 Query: 233 S 233 Sbjct: 241 I 241 >gi|315180484|gb|ADT87398.1| hypothetical flagellar basal-body rod protein [Vibrio furnissii NCTC 11218] Length = 244 Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 40/244 (16%), Positives = 90/244 (36%), Gaps = 6/244 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + A+N+++ +TVGF+ ++ S+ + + ++ Sbjct: 1 MNPILFTAAKGAERVMLAQEVRANNLAHANTVGFK-SLMEHSDAMAVAGSGFQSSVT-TR 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFA---LESPRGIILTRDGRFKVTDDGSLVSA 117 + + G+ + TG +LD + G +F+ + +R G F+++ DG L+ Sbjct: 59 TNSASTNFTPGAEVRTGRDLDVQIPGRGFFSVAGQAGEPEELYSRAGNFRLSSDGLLLLG 118 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177 + D + + + G + L V+ + SG+ Sbjct: 119 DRQVLGEDGPIEVPEFQAINIASDGAISITPPGGGAEMQIGLLKLVNPEYADMTLHTSGL 178 Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 L V V+ G+LE SN +S+ E+ M+ LT+++ + + + + Sbjct: 179 FVPKQGETLAFDPEVAVRSGYLEGSNVSSLDELVSMMALTRQYEMQVKAMASASE-IEKM 237 Query: 238 IRNI 241 + Sbjct: 238 GNQL 241 >gi|23012978|ref|ZP_00052943.1| COG4786: Flagellar basal body rod protein [Magnetospirillum magnetotacticum MS-1] Length = 213 Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 57/215 (26%), Positives = 94/215 (43%), Gaps = 11/215 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA-----IKNDIDQK 55 M + IGL+ QLALE+ + A+N++N T GF++ +F E + D++ Sbjct: 1 MNNTLLIGLSHQLALERAMEVAANNVANVTTTGFKSRSAEFREYLMPGARVEAARPSDRR 60 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEG-DAWFALESPRGIILTRDGRFKVTDDGSL 114 +S+V L VG TG+ LD AL +A+FA+++ G TR+G F++ G L Sbjct: 61 LSYVVDAATPLDLSVGQIERTGSPLDVALRDENAFFAVQTSGGERYTRNGAFQLNAAGDL 120 Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174 V++ G + PI + ++G G IS + + L + V Sbjct: 121 VTSDGYTVLGTA--GPILFAKNTREISIGTDGTISTEQGPSGKLRLVQFADPERLVSAGG 178 Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYE 209 + + P ++ G LE SN N E Sbjct: 179 NLYQSST---PPRGAPASRLEVGSLERSNVNPFTE 210 >gi|238799108|ref|ZP_04642564.1| Flagellar basal-body rod protein flgF [Yersinia mollaretii ATCC 43969] gi|238717055|gb|EEQ08915.1| Flagellar basal-body rod protein flgF [Yersinia mollaretii ATCC 43969] Length = 251 Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 86/252 (34%), Gaps = 13/252 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A+N++N T GFR V I + V Sbjct: 1 MDHAIYTAMGAARQSLDQQAVTANNLANASTPGFRAQLSAMRAV--PIDGPSMATRTMVV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + G+ +G LD AL+ D + A++ P TR+G +V +G + + G Sbjct: 59 ASTPGVDISQGTINFSGRPLDVALQQDGYLAVQLPDGTEAYTRNGNIQVAANGQM-TVQG 117 Query: 120 KYPVLDM---ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + D P + + + V + G V + G Sbjct: 118 YPLMGDNGPIEVPPQAAVTIAADGTISALNAGDSPNTIAQLGQIKRVRATAGEVMHGDDG 177 Query: 177 IS------PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + L + + + G LE SN ++ M MI + F +I Sbjct: 178 LFHLTPAAQQARGAQLANDPLIKIMPGVLEGSNVKAVEAMTDMIANARSFEMQMKIIHSV 237 Query: 231 EKSMLEAIRNIA 242 +++ A + +A Sbjct: 238 DENEQRANQLLA 249 >gi|89095666|ref|ZP_01168560.1| FlhP [Bacillus sp. NRRL B-14911] gi|89089412|gb|EAR68519.1| FlhP [Bacillus sp. NRRL B-14911] Length = 274 Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 42/275 (15%), Positives = 94/275 (34%), Gaps = 34/275 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M L++++ + NM+N DT G++ + F++++ + Sbjct: 1 MSRMMITATNTLAQLQKQMDITSHNMANVDTTGYKRREATFTDLLVQQFANQPNSADENR 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA-----LESPRGIILTR 102 ++ + + + GS +T +LD A + E+ + TR Sbjct: 61 LTPNGLRQGTGAMLAQSQIVMAQGSIKTTDRQLDTAFTKENQLYKVLVQTETGSEVQYTR 120 Query: 103 DGRFK----VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158 DG F + LV+++G + + + Q E ++ Sbjct: 121 DGAFYLTPVSDTESMLVTSAGNAVLDENDNPIYINGQPGEFAITENGILTAKDSTGQEQE 180 Query: 159 ---GLYSVDMSQGFVRRENSGISPNIPPTPLEDL--------SGVTVKRGFLEDSNANSM 207 G+ V+ Q ++ + ++ ++ L V++ LE SN N Sbjct: 181 FSLGIVRVNKPQFLQQQGGNLLALAAGADGIDVLTDLTGALRGEAGVQQRALEQSNVNMQ 240 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 EM +I + + + + I ++ M + I Sbjct: 241 KEMTDLITVQRAYQFQSRAISMADQMMG-LVNGIR 274 >gi|109947349|ref|YP_664577.1| flagellar basal-body rod protein FlgG [Helicobacter acinonychis str. Sheeba] gi|109714570|emb|CAJ99578.1| flagellar basal-body rod protein FlgG [Helicobacter acinonychis str. Sheeba] Length = 269 Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 52/255 (20%), Positives = 94/255 (36%), Gaps = 26/255 (10%) Query: 14 ALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDID--------------QKI 56 RL V++N++N +T GF+ F + + + Sbjct: 14 TQFNRLDLVSNNLANLNTNGFKRDDTITSDFLRLYQQYQEQLPLKDQTKASAKYLNRNLN 73 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTRDGRFKVTDDGSLV 115 + Y K +G+F T LDFAL + +FA+++ GI TRDG F + DG LV Sbjct: 74 RVPILSEIYTDKSLGAFEETHNPLDFALTSPNLYFAIQTNEGIAYTRDGHFSIDKDGFLV 133 Query: 116 SASGKYP---VLDMASVPIQIPQKDEIFNVGEKGEISQKGK---VIATMGLYSVDMSQGF 169 + +G I + EI G + + L S + Sbjct: 134 TLNGFKVLSRSGLNEQGGIMLMPNTEIEVDQNGGITFSDNEAQIQAGALALVSFSEPKNL 193 Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 + + + S +++ LE SN N++ EM +I + + + + ++ Sbjct: 194 KKIGQNLYTYQGEGIHQVSDSNA-LRQYMLEKSNVNAVREMSALIEINRFLDMYSKVLKT 252 Query: 230 -NEKSMLEAIRNIAS 243 + EAI +A+ Sbjct: 253 HQDDMNAEAINKLAT 267 >gi|83646789|ref|YP_435224.1| flagellar basal body rod protein [Hahella chejuensis KCTC 2396] gi|83634832|gb|ABC30799.1| Flagellar basal body rod protein [Hahella chejuensis KCTC 2396] Length = 235 Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 49/231 (21%), Positives = 95/231 (41%), Gaps = 9/231 (3%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 A +RL T++ N+SN ++ ++ + A + + F G Sbjct: 12 LNADLERLRTISQNLSNQGAPAYKRDQMIVEKFQAAYLSGAKLEPEF----SLQKDFTQG 67 Query: 72 SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPI 131 +F TG +D AL+G+ + S TR G+ ++ DG L +G+ + Sbjct: 68 AFKLTGNAMDIALDGEGFLMASSSDKTFFTRKGQMRLNPDGYLGLVTGERLL----GRSG 123 Query: 132 QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSG 191 I D F V G + Q G V+ + + + + +G+ N + +G Sbjct: 124 PIALNDADFVVQPDGSVVQDGVVLDKLAVVTFQHPEQL-SYAGAGLFENPTKQAPTEATG 182 Query: 192 VTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 V + +LE SN N+M E+ +++ LT+ + ++ + S+ AI + Sbjct: 183 AQVMQSYLEMSNVNTMEEIVRLVELTRHYQLSHNVLKAYDGSIDSAISTLG 233 >gi|325567512|ref|ZP_08144179.1| hypothetical protein HMPREF9087_0468 [Enterococcus casseliflavus ATCC 12755] gi|325158945|gb|EGC71091.1| hypothetical protein HMPREF9087_0468 [Enterococcus casseliflavus ATCC 12755] Length = 260 Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 41/245 (16%), Positives = 85/245 (34%), Gaps = 16/245 (6%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA---------IKNDIDQK 55 I + L+ L T A+N++N +T G++ F ++ N Sbjct: 7 LGISRSGLNHLQTNLDTTANNIANVNTNGYQAQTTHFQALMENAIGAEETLFNGNAAQYG 66 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSL 114 S A S G+ T LD A++G+ +F + G +L +R G F ++++ L Sbjct: 67 ASMGAKATTTTSFAQGNLAGTAQPLDLAIQGNGFFGVRDQTGQLLLSRAGNFHLSENKQL 126 Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174 V++ G + Q P +I +++ +G ++ + Sbjct: 127 VNSEGYPVAMTTNVPTAQWPDVQQIAIDASGQLTTEENGQTRVLGQLTLYQPTNTENITS 186 Query: 175 SGISPNIPPTP------LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228 G + +V +G LE S + M ++ + + T + Sbjct: 187 VGNQLYSAGDQALLTSQTNPAAFGSVLQGQLEQSTVDLATSMTDLLTTQRAYGLNTKAMQ 246 Query: 229 ENEKS 233 ++ Sbjct: 247 TADEM 251 >gi|218290051|ref|ZP_03494218.1| protein of unknown function DUF1078 domain protein [Alicyclobacillus acidocaldarius LAA1] gi|218239885|gb|EED07073.1| protein of unknown function DUF1078 domain protein [Alicyclobacillus acidocaldarius LAA1] Length = 262 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 85/252 (33%), Gaps = 17/252 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56 M GL+ A + +ADN++N T G+ + F++++ Sbjct: 1 MGQMMWNGLSGIQAANAWIDQIADNLANLQTPGYAAEQGTFADLLTMQVYGNATDPSAAD 60 Query: 57 ----------SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106 + V E + + TG A+EG +F +++P G + TR G F Sbjct: 61 RLTPPGWRGGTGVVRTGEERDFSQAAVVRTGIPTHLAIEGPGFFVVQTPSGRMYTRAGNF 120 Query: 107 KVT---DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 + D +++ PVL A I P +V G I +GL + Sbjct: 121 IWSRRSDGSFVLATQAGDPVLSAAGQLIVKPADAPSMSVARDGTIQFGRGRTVKLGLVEI 180 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223 + E +G+ +V +G + SN + M Q++ + Sbjct: 181 GEPSSHLIPEGNGLYRLASGGVAVPARNSSVIQGAVNASNVDETAAMAQLVAAQDFYEEN 240 Query: 224 TTLIDENEKSML 235 I + + Sbjct: 241 AQAISMANQLLG 252 >gi|89092137|ref|ZP_01165092.1| flagellar basal-body rod protein FlgF [Oceanospirillum sp. MED92] gi|89083872|gb|EAR63089.1| flagellar basal-body rod protein FlgF [Oceanospirillum sp. MED92] Length = 247 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 46/243 (18%), Positives = 94/243 (38%), Gaps = 7/243 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + ++ A+N++N +T GF+ + + + + + Sbjct: 1 MDKVLYLAMSGARENMLAQQAHANNLANANTTGFKADLAQARAM--QVFGEGHASRVYAQ 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + G+ I TG +LD ++ GD W + P TR G ++ LV+ SG Sbjct: 59 TERPATDVTHGTLIDTGRKLDVSVTGDGWLTVIRPDGTEGYTRAGSLQINAASQLVTGSG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK----VIATMGLYSVDMSQGFVRRENS 175 + + + P ++ + G+ ++ L V+ V + Sbjct: 119 LPVMGNGGIPIVLPPFENIEIATNGTITVRPLGENATELLVADQLKLVNPDPASVFKGPD 178 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 G+ PLE V V+ G+LE SN N++ E+ +I +++F ++ E++ Sbjct: 179 GLMITGDQVPLEPDPAVQVRSGYLEASNVNAVSELTGIITSSRQFEMQIKMMKTAEENSE 238 Query: 236 EAI 238 A Sbjct: 239 SAA 241 >gi|304397205|ref|ZP_07379084.1| flagellar basal-body rod protein FlgF [Pantoea sp. aB] gi|304355354|gb|EFM19722.1| flagellar basal-body rod protein FlgF [Pantoea sp. aB] Length = 251 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 48/251 (19%), Positives = 88/251 (35%), Gaps = 14/251 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V + + VA Sbjct: 1 MDHAIYTAMGAASQTLDQQAVTASNLANASTPGFRAQLNALRAV--PVSGWSLPTRTLVA 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G+ T LD A++ D W A+ + TR+G +++ G ++ G Sbjct: 59 ASTPGADMSQGAMDYTERPLDVAVQQDGWLAVRTADGSEAYTRNGNMQISPTG-TLTVQG 117 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV----DMSQGFVRRENS 175 + D + I + I G ++ AT+ L + Q R ++ Sbjct: 118 NPVMGDGGPIVIPQGTEITIAADGSITGLNAGDSPNATVQLGKLKLVRATGQELQRSDDG 177 Query: 176 GISPNIP-----PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 P L+ + V G LE SN + M MI ++F +I Sbjct: 178 MFRPTASTQATRGAALQADPTMQVMPGVLEGSNVKPVETMVDMIANARRFEMQMKVITNV 237 Query: 231 EKSMLEAIRNI 241 +++ +A + Sbjct: 238 DENEQKA-NQL 247 >gi|224170008|ref|XP_002339332.1| predicted protein [Populus trichocarpa] gi|222874887|gb|EEF12018.1| predicted protein [Populus trichocarpa] Length = 251 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 54/249 (21%), Positives = 91/249 (36%), Gaps = 18/249 (7%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV-----------------VGAIKNDIDQ 54 QRL N++N T G++ V + A Sbjct: 1 MQQDMQRLDRTGLNLANALTPGYQREVVSARPLRLGAPSFAAMVGTAAAAAVADNAPAAS 60 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSL 114 + A G+ STG LD AL G +F + +P G TR G F++ G L Sbjct: 61 PHAPAAGLLVQTDHRPGTLRSTGQNLDVALAGAGYFEVSTPGGPAYTRQGSFRLDAQGRL 120 Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ-GFVRRE 173 V+A G + + +Q Q L V+ Q +RR Sbjct: 121 VTAQGHAVMGRGGEILLQSSQVRIDAQGNIFDGDGVGRTDRPVAQLKVVEAPQPSQLRRL 180 Query: 174 NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 G+ + + +++GF+E+SN +SM+EM Q++ + F S+ + ++ Sbjct: 181 GEGLMSIDGQPGQLADADIRIQQGFVENSNVSSMHEMVQLMQTMRHFESMQKVALGYDEM 240 Query: 234 MLEAIRNIA 242 +AIR + Sbjct: 241 TGQAIRKLG 249 >gi|238751763|ref|ZP_04613251.1| Flagellar basal-body rod protein flgF [Yersinia rohdei ATCC 43380] gi|238710034|gb|EEQ02264.1| Flagellar basal-body rod protein flgF [Yersinia rohdei ATCC 43380] Length = 251 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 47/252 (18%), Positives = 86/252 (34%), Gaps = 13/252 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A+N++N T GFR V I + V Sbjct: 1 MDHAIYTAMGAARQSLELQAVTANNLANASTPGFRAQLAAMRAV--PIDGPSMPTRTMVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + G+ +G LD AL+ D + A++ P TR+G +V +G + + G Sbjct: 59 ASTPGVDISQGTMNYSGRPLDVALQQDGYLAVQLPDGTEAYTRNGNIQVAANGIM-TVQG 117 Query: 120 KYPVLDM---ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + D P + + + V + G V + G Sbjct: 118 YPLMGDNGPIEVPPQAAVTIAADGTISALNAGDSPNTIAQLGQIKRVKATAGEVMHGDDG 177 Query: 177 IS------PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + L + V + G LE SN ++ M MI + F +I Sbjct: 178 LFHLTAATQQARGAQLANDPLVKIMPGVLEGSNVKAVEAMSDMIANARSFEMQMKVIHSV 237 Query: 231 EKSMLEAIRNIA 242 +++ A + +A Sbjct: 238 DENEQRANQLLA 249 >gi|299538001|ref|ZP_07051287.1| flagellar hook-basal body complex protein [Lysinibacillus fusiformis ZC1] gi|298726583|gb|EFI67172.1| flagellar hook-basal body complex protein [Lysinibacillus fusiformis ZC1] Length = 279 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 42/280 (15%), Positives = 93/280 (33%), Gaps = 39/280 (13%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ------ 54 M + L+ +L T+++N++N++T G++T + F+E++ N+ Q Sbjct: 1 MLRTMITATNTMGQLQNKLDTISNNIANSNTTGYKTKEASFNELLYQQFNNDKQDRAERQ 60 Query: 55 ------KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA------LESPRGIILTR 102 S G+ +++ GS +T +LD A + E+ + TR Sbjct: 61 TPVGIRYGSGAMVGQIKSNEKQGSLQTTNRDLDLAFTKAKQYFNILMPDGENGTETVYTR 120 Query: 103 DGRFKVTDDGSLV------------SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ 150 G F ++ + + +G+ L + + G+I + Sbjct: 121 QGDFYLSPLNNGTVMLVTAEGYPVANVAGQAITLPDTVQKFAVRDGGVLEASYPNGDIIR 180 Query: 151 KGKVI-----ATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS---GVTVKRGFLEDS 202 + + + G + + ++ G LE S Sbjct: 181 TNLAVTEFQKPQLMEHVAGSYMGLPNNLAELGYTQAEVLTELVGANRQQIGMQSGTLEMS 240 Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 N N EM ++I + + + ++ + I I Sbjct: 241 NVNLSKEMTELIQTQRSYQFNARAVTLADQMLG-LINGIR 279 >gi|312962296|ref|ZP_07776787.1| flagellar basal-body rod protein F [Pseudomonas fluorescens WH6] gi|311283223|gb|EFQ61813.1| flagellar basal-body rod protein F [Pseudomonas fluorescens WH6] Length = 246 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 47/243 (19%), Positives = 93/243 (38%), Gaps = 6/243 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A+N++N T GF+ + + + D +F Sbjct: 1 MDKYLYVAMTGASQNALAQKAHANNLANISTNGFQRDLEQARSM--PVFGDSFPARAFAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119 + + G+ I TG +LD A+ GD W A+++P G R V G L + +G Sbjct: 59 TERPATDFSPGAMIETGRDLDVAVNGDGWMAVQTPDGGEAYVRSASMNVDALGVLRAGNG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN---SG 176 + + + + QK E+ G + + + + Q ++ N G Sbjct: 119 MPIMGNGGPIAVPPQQKIEVGADGTISIRAMGEGPRVMAEVDRIKLVQPDLKNMNKGLDG 178 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 P + V + GFL+ SN N++ EM ++ L+++F +++ ++ Sbjct: 179 TIHTKDGKPAVADASVKLTSGFLQASNVNAVEEMTAVLALSKQFELHIKMMNSAKEDDQA 238 Query: 237 AIR 239 R Sbjct: 239 MTR 241 >gi|229591870|ref|YP_002873989.1| flagellar basal body rod protein FlgF [Pseudomonas fluorescens SBW25] gi|229363736|emb|CAY51141.1| flagellar basal-body rod protein [Pseudomonas fluorescens SBW25] Length = 246 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 46/243 (18%), Positives = 94/243 (38%), Gaps = 6/243 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A+N++N T GF+ + + + D +F Sbjct: 1 MDKYLYVAMTGASQNALAQKAHANNLANISTNGFQRDLEQARSM--PVFGDSFPARAFAL 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + G+ I TG +LD A+ G+ W A+++P R V G L + +G Sbjct: 59 TERPGTDFSPGAMIETGRDLDVAVSGNGWMAVQTPDGSEAYVRSASMNVDALGVLRAGNG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN---SG 176 + + + + QK E+ G + + + + Q ++ N G Sbjct: 119 MPIMGNGGPIAVPPQQKIEVGADGTISIRAMGEGPRVMAEVDRIKLVQPDLKNMNKGLDG 178 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 P + + VT+ GFL+ SN N++ EM ++ L+++F +++ ++ Sbjct: 179 TIHTKDGQPAQADATVTLTSGFLQASNVNAVEEMTAVLALSKQFELHIKMMNSAKEDDQA 238 Query: 237 AIR 239 R Sbjct: 239 MTR 241 >gi|149202207|ref|ZP_01879180.1| flagellar proximal rod protein FlgF [Roseovarius sp. TM1035] gi|149144305|gb|EDM32336.1| flagellar proximal rod protein FlgF [Roseovarius sp. TM1035] Length = 253 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 43/254 (16%), Positives = 84/254 (33%), Gaps = 15/254 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIK-----VKFSEVVGAIKNDIDQK 55 M L A A N++N G+R V+F +++ + + Sbjct: 1 MDRMIYTALNALGVNRDSQVAQAQNLANQTVPGYRRDLPNEGGVRFLDMM----EGLTTR 56 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSL 114 V +G S+E G T ELD A+ +F + L+R G + DG+L Sbjct: 57 AFQVETGPAGFSQETGRLTRTDEELDVAIADRGFFYVMPESGDPALSRRGDLRRDTDGTL 116 Query: 115 VSASGKYPVLDMASV-----PIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169 + +G + + I D + + + V+A + + Sbjct: 117 RNGAGDAMLGADMAPLQVPAYRNIRITDIGEIYIQPLDDPEGDPVLAGVLATVIPPEDVA 176 Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 + + G + V +G LE SN N + E+ + + + F ++ Sbjct: 177 LTKGADGQIRTVEGVLPPPNQQAEVLQGTLESSNVNPVEELLSTMQMQRNFELGMRMVLT 236 Query: 230 NEKSMLEAIRNIAS 243 + R + + Sbjct: 237 ARELDESGARTMQA 250 >gi|238758109|ref|ZP_04619289.1| Flagellar basal-body rod protein flgF [Yersinia aldovae ATCC 35236] gi|238703647|gb|EEP96184.1| Flagellar basal-body rod protein flgF [Yersinia aldovae ATCC 35236] Length = 251 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 45/252 (17%), Positives = 90/252 (35%), Gaps = 13/252 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A ++ + A+N++N T GFR + I + VA Sbjct: 1 MDHAIYTAMGAARQSLEKQAVTANNLANVATPGFRAQLTAMRAI--PIDGPSLMTRTMVA 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + ++ G+ +G LD AL+ D + A++ P TR+G +++ +G + + G Sbjct: 59 ASTPGVNISQGTMNYSGRPLDVALQQDGYLAVQLPDGTEAYTRNGNIQISSNGQM-TVQG 117 Query: 120 KYPVLDM---ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + D P + + + V + G V + G Sbjct: 118 YPLMGDNGPIEVPPQAAVTIAADGTISALNAGDSPNTIAQLGQIKRVKATAGEVMHGDDG 177 Query: 177 IS------PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + L + + + G LE SN ++ M MI + F +I Sbjct: 178 LFHLTPATQQARGAQLANDPLIKIMPGVLEGSNVKAVEAMTDMIANARSFEMQMKVIHSV 237 Query: 231 EKSMLEAIRNIA 242 +++ A + +A Sbjct: 238 DENEQRANQLLA 249 >gi|307131608|ref|YP_003883624.1| flagellar basal-body rod protein flgF [Dickeya dadantii 3937] gi|306529137|gb|ADM99067.1| Flagellar basal-body rod protein flgF [Dickeya dadantii 3937] Length = 251 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 52/254 (20%), Positives = 96/254 (37%), Gaps = 17/254 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A ++ + + NM+N T GFR V I+ ++ + V Sbjct: 1 MDHAIYTAMGAASQTLEQQAVTSHNMANASTPGFRAQLSAMRAV--PIQGVTNETRTLVI 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 S + GS TG +D AL D W A+ S TR+G ++ +G ++ G Sbjct: 59 SSTPGVDTTPGSMDYTGRSMDVALSQDGWLAVRSADGSEAYTRNGNMEINANG-QLTIQG 117 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG-----------KVIATMGLYSVDMSQG 168 + D + + + I G ++ K++ G G Sbjct: 118 NLVMGDGGPIDVPPQTQLTIGPDGTINALNPSDAANTVTQIGRLKLVKATGTEVTRGDDG 177 Query: 169 FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228 R + + L++ + V V G LE SN N++ M +MI +++F +I Sbjct: 178 LFRVSPA--AQQQRGAALQNDATVRVMPGVLEGSNVNTVESMVEMISNSRRFEMQMKVIS 235 Query: 229 ENEKSMLEAIRNIA 242 + + A + +A Sbjct: 236 NVDDNTQRANQILA 249 >gi|123442783|ref|YP_001006760.1| flagellar basal body rod protein FlgF [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122089744|emb|CAL12597.1| flagellar basal-body rod protein FlgF [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 251 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 47/252 (18%), Positives = 87/252 (34%), Gaps = 13/252 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A+N++N T GFR+ V I + V Sbjct: 1 MDHAIYTAMGAARQSLELQAVTANNLANASTPGFRSQLAAMRAV--PIDGPSMATRTMVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + GS +G LD AL+ D + A+ P TR+G +++ DG + + G Sbjct: 59 ASTPGVDISQGSMNYSGRPLDVALQQDGYLAVRLPDGTEAYTRNGNIQISADGQM-TVQG 117 Query: 120 KYPVLDM---ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + D P + + + V + G V + G Sbjct: 118 YPLMGDNGPIEVPPQAAVTIAADGTISALNAGDSPNTIAQLGQIKRVRATAGEVMHGDDG 177 Query: 177 IS------PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + L + + + G LE SN ++ M MI + F +I Sbjct: 178 LFHLTPETQQARGAQLANDPLIKIMPGVLEGSNVKAVEAMADMIANARSFEMQMKVIHSV 237 Query: 231 EKSMLEAIRNIA 242 +++ A + +A Sbjct: 238 DENEQRANQLLA 249 >gi|322832565|ref|YP_004212592.1| flagellar basal-body rod protein FlgF [Rahnella sp. Y9602] gi|321167766|gb|ADW73465.1| flagellar basal-body rod protein FlgF [Rahnella sp. Y9602] Length = 251 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 53/252 (21%), Positives = 91/252 (36%), Gaps = 15/252 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + A + S + N++N +T GFR+ + V + + Q + V Sbjct: 1 MDHAIYTAGGAASQTLVQQSVTSSNLANANTPGFRSQLLAMRAV--PVDGESLQTRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G TG LD AL+ D + A++ P TR+G +V+ L Sbjct: 59 ASTPGADMTQGKLNYTGRPLDVALQQDGFLAVQMPDGSEAYTRNGDMQVSPTNQL--TVQ 116 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 +PV+ P + + + G TMG V + V R + Sbjct: 117 GHPVMGDNGPIEVPPNSQLTVSADGTIAVLEAGADPNTMGQLGKLKLVKAANNEVTRGDD 176 Query: 176 GISPNIP------PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 G+ P L+ + V G LE SNA+ + M MI ++F +I Sbjct: 177 GMFRPTPATVQARGAALQPDPTIHVMPGTLEGSNADPVSTMVDMIANARRFEMQMKVIHS 236 Query: 230 NEKSMLEAIRNI 241 +++ A + Sbjct: 237 VDENEQSANNLL 248 >gi|283833629|ref|ZP_06353370.1| flagellar basal-body rod protein FlgF [Citrobacter youngae ATCC 29220] gi|291071312|gb|EFE09421.1| flagellar basal-body rod protein FlgF [Citrobacter youngae ATCC 29220] Length = 251 Score = 113 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 48/252 (19%), Positives = 82/252 (32%), Gaps = 16/252 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V ++ + V Sbjct: 1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G T LD AL+ D W A+++ TR+G +V+ G L Sbjct: 59 ASTPGADMTPGQMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGAIQVSPTGEL--TIQ 116 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 +PV+ A + G T+ V + V+R + Sbjct: 117 GHPVIGEAGPIAVPEGSEVTIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176 Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 G+ L+ + V G LE SN + M MI ++F +I Sbjct: 177 GMFRLSAAAQATRGPTLQADPSIRVMSGVLEGSNVKPVAAMSDMIANARRFEMQMKIISS 236 Query: 230 NEKSMLEAIRNI 241 + + A + Sbjct: 237 VDDNAGRA-NQL 247 >gi|332161323|ref|YP_004297900.1| flagellar basal body rod protein FlgF [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318605243|emb|CBY26741.1| flagellar basal-body rod protein FlgF [Yersinia enterocolitica subsp. palearctica Y11] gi|325665553|gb|ADZ42197.1| flagellar basal body rod protein FlgF [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330860605|emb|CBX70902.1| flagellar basal-body rod protein flgF [Yersinia enterocolitica W22703] Length = 251 Score = 113 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 87/252 (34%), Gaps = 13/252 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A+N++N T GFR+ V I + V Sbjct: 1 MDHAIYTAMGAARQSLELQAVTANNLANASTPGFRSQLAAMRAV--PIDGPSMATRTMVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + G+ +G LD AL+ D + A+ P TR+G +++ DG + + G Sbjct: 59 ASTPGVDISQGTMNYSGRPLDVALQQDGYLAVRLPDGTEAYTRNGNIQISADGQM-TVQG 117 Query: 120 KYPVLDM---ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + D P + + + V + G V + G Sbjct: 118 YPLMGDNGPIEVPPQAAVTIAADGTISALNAGDSPNTIAQLGQIKRVRATAGEVMHGDDG 177 Query: 177 IS------PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + L + + + G LE SN ++ M MI + F +I Sbjct: 178 LFHLTPETQQARGAQLANDPLIKIMPGVLEGSNVKAVEAMADMIANARGFEMQMKVIHSV 237 Query: 231 EKSMLEAIRNIA 242 +++ A + +A Sbjct: 238 DENEQRANQLLA 249 >gi|291558217|emb|CBL35334.1| fagellar hook-basal body proteins [Eubacterium siraeum V10Sc8a] Length = 235 Score = 113 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 39/236 (16%), Positives = 92/236 (38%), Gaps = 10/236 (4%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDIDQKISFVASGKEYLSK 68 L ++ L +++N++N +T G++ ++ F E + + N FV + + Sbjct: 1 MLNHQRSLDAISNNLTNINTAGYKKDEIRMNTFQEELILVSNRRKTSGKFVQTYVDTSKS 60 Query: 69 E--VGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASGKYPVLD 125 SF T + D ++G+ +F ++ G + TR G+F++ +G L + Sbjct: 61 NLEQSSFEFTESPFDIGIQGNVYFNIQGTNGNVYQTRCGQFELDGEGYLCLNDSGRVL-- 118 Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185 +I ++ F V +G I + + S V + + + Sbjct: 119 --GQSGEIYIGNDDFIVDNEGNILNENGEVIEKLRLSYIPENADVTKVGNNLFSYDGDMT 176 Query: 186 LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 + + + +G E SN ++ E+ ++ + F + + ++ + A I Sbjct: 177 IPEDEKYDIIQGCFEKSNVDANKEITSLMETQRLFEASSAVLKYMDTINGRAASEI 232 >gi|294084417|ref|YP_003551175.1| flagellar proximal rod protein FlgF [Candidatus Puniceispirillum marinum IMCC1322] gi|292663990|gb|ADE39091.1| flagellar proximal rod protein FlgF [Candidatus Puniceispirillum marinum IMCC1322] Length = 251 Score = 113 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 42/239 (17%), Positives = 72/239 (30%), Gaps = 6/239 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIK--VKFSEVVGAIKNDIDQKISF 58 M + + S A NMSN G+R + N + Sbjct: 1 MDKFIFTAMNTVNNIYDNRSVRAQNMSNISVPGYRRDLGTKSAGSAFLNVMNGFQSRAFA 60 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSAS 118 + G T +D A+ G+ +F ++ + LTR G V DG LV+ S Sbjct: 61 LKDNNNIFESAPGQLSQTNEAMDIAIRGEGYFVVKGQGDVSLTRRGDLSVGADGFLVNGS 120 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM----GLYSVDMSQGFVRREN 174 + + + F+ + I G T L +++ Sbjct: 121 KAKLLDAELNPIQVPANRSITFSENGEIIIEPVGAEAGTRVNIGQLAMTSAVDVQLKKFP 180 Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 G E V + +E SN N E+ I +++ LI ++ Sbjct: 181 DGEIRAANGEVPEIDQKPRVIQHNVELSNVNITEELVNSIEDQRQYEINIKLISTAQEL 239 >gi|251789169|ref|YP_003003890.1| flagellar basal body rod protein [Dickeya zeae Ech1591] gi|247537790|gb|ACT06411.1| flagellar basal body rod protein [Dickeya zeae Ech1591] Length = 251 Score = 113 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 52/252 (20%), Positives = 91/252 (36%), Gaps = 13/252 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A ++ + + NM+N T GFR V I+ ++ + V Sbjct: 1 MDHAIYTAMGAASQTLEQQAVTSHNMANASTPGFRAQLAAMRAV--PIQGVTNETRTLVI 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 S + GS TG +D AL D W A+ + TR+G ++ +G ++ G Sbjct: 59 SSTPGVDTTPGSMDYTGRSMDVALSQDGWLAVRAADGSEAYTRNGNMEINSNG-QLAVQG 117 Query: 120 KYPVLDM---ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + + D P + V L V + V R + G Sbjct: 118 RLVMGDGGPIEVPPQTQLTIGPDGTINALNPSDAANTVTQIGRLKLVKATANEVTRGDDG 177 Query: 177 ISPNIPPTPLEDLS------GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 P + + V V G LE SN N++ M +MI +++F +I Sbjct: 178 FFRVSPAAQQQRGAVLQNDATVRVMPGVLEGSNVNTVESMVEMISNSRRFEMQMKVISNV 237 Query: 231 EKSMLEAIRNIA 242 + + A + +A Sbjct: 238 DDNTQRANQILA 249 >gi|327441420|dbj|BAK17785.1| flagellar basal body rod protein [Solibacillus silvestris StLB046] Length = 279 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 48/280 (17%), Positives = 92/280 (32%), Gaps = 39/280 (13%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--------- 51 M + L+ +L T++ N++N++T GF+ + F+E++ N+ Sbjct: 1 MLRTMVSATNTLSQLQHQLDTISTNIANSNTTGFKAQQANFTEMLYQQFNNDELDRTVRD 60 Query: 52 ---IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL------ESPRGIILTR 102 + G ++ GS T +LDFAL + + E TR Sbjct: 61 TPVGIRYGVGAQIGLIQSNQSQGSLQVTNRDLDFALTTENQYFNVLMQNPEGDVRTAYTR 120 Query: 103 DGRFK------------VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ 150 +G F +D + A+G+ + + E G + Sbjct: 121 NGSFYVTQNEPGILSLVNSDGYQVADANGQPITFPDNVTGFTMDSDGSLVASYENGTPLK 180 Query: 151 KGKVIATMGLYSV------DMSQGFVRRENSGISPNIPPTPLEDLS--GVTVKRGFLEDS 202 I+ + +V G ++ + V V++G LE S Sbjct: 181 FQLGISELQKPNVMEKLQGGTYIGLPENLDALGFTQAQVLTDLQGANRQVGVQKGALEMS 240 Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 N + EM +I + + T I ++ + I I Sbjct: 241 NVDVSKEMTNLIQAQRSYQFNTRAITIADQMLG-LINGIR 279 >gi|237731008|ref|ZP_04561489.1| flagellar basal body rod protein FlgF [Citrobacter sp. 30_2] gi|226906547|gb|EEH92465.1| flagellar basal body rod protein FlgF [Citrobacter sp. 30_2] Length = 251 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 84/251 (33%), Gaps = 14/251 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V ++ + V Sbjct: 1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G T LD AL+ D W A+++ TR+G +V+ G ++ G Sbjct: 59 ASTPGADMTPGQMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGAIQVSPTG-ELTIQG 117 Query: 120 KYPVL--DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF-VRRENSG 176 + +VP +A +G + + G V+R + G Sbjct: 118 HPVIGEAGPIAVPEGSEVTIAADGTISALNPGDPANTVAPVGRLKLVKATGLEVQRGDDG 177 Query: 177 ISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + L+ + V G LE SN + M MI ++F +I Sbjct: 178 MFRLTQAAQATRGATLQADPSIRVMSGVLEGSNVKPVAAMSDMIANARRFEMQMKIISSV 237 Query: 231 EKSMLEAIRNI 241 + + A + Sbjct: 238 DDNAGRA-NQL 247 >gi|313673204|ref|YP_004051315.1| fagellar hook-basal body protein [Calditerrivibrio nitroreducens DSM 19672] gi|312939960|gb|ADR19152.1| fagellar hook-basal body protein [Calditerrivibrio nitroreducens DSM 19672] Length = 206 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 43/242 (17%), Positives = 85/242 (35%), Gaps = 36/242 (14%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M L+A A ++ A+N++N + F+ E V Sbjct: 1 MIPGLFYALSAISAGNKKYGVTANNIANISSTAFKGKIAHLKEF----------SKGGVE 50 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 ++ +G FI+TG LD A+ GD +F + +R G + +G +V SG+ Sbjct: 51 LYSVTSNEGIGYFINTGRPLDLAINGDGYFKFTDGNKEVYSRMGILSIDKNGEMVDVSGR 110 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 I + + ++ KG + G+V + +Y+ + Sbjct: 111 RV-------GINVGTSPDNVHIDNKGNVYVDGEVKGKLQIYNQNG--------------- 148 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 + S + GFLE SN + EM + I + + + ++ + + Sbjct: 149 ----GVVPDSNYEILSGFLEASNVDIAKEMVESITNFRYIQANVKTVKTVDEMLGNIVNI 204 Query: 241 IA 242 + Sbjct: 205 VG 206 >gi|167750706|ref|ZP_02422833.1| hypothetical protein EUBSIR_01684 [Eubacterium siraeum DSM 15702] gi|167656385|gb|EDS00515.1| hypothetical protein EUBSIR_01684 [Eubacterium siraeum DSM 15702] Length = 235 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 39/236 (16%), Positives = 92/236 (38%), Gaps = 10/236 (4%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDIDQKISFVASGKEYLSK 68 L ++ L +++N++N +T G++ ++ F E + + N FV + + Sbjct: 1 MLNHQRSLDAISNNLTNINTAGYKKDEIRMNTFQEELILVSNRRKTSGKFVQTYVDTSKS 60 Query: 69 E--VGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASGKYPVLD 125 SF T + D ++G+ +F ++ G + TR G+F++ +G L + Sbjct: 61 NLEQSSFEFTESPFDIGIQGNVYFNIQGTNGNVYQTRCGQFELDGEGYLCLNDSGRVL-- 118 Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185 +I ++ F V +G I + + S V + + + Sbjct: 119 --GQNGEIYIGNDDFIVDNEGNILNENGEVIERLRLSYIPENADVTKVGNNLFSYDGNMT 176 Query: 186 LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 + + + +G E SN ++ E+ ++ + F + + ++ + A I Sbjct: 177 IPEGEKYDIIQGCFEKSNVDANKEITSLMETQRLFEASSAVLKYMDTINGRAASEI 232 >gi|169826609|ref|YP_001696767.1| flagellar hook-basal body complex protein [Lysinibacillus sphaericus C3-41] gi|168991097|gb|ACA38637.1| Flagellar hook-basal body complex protein [Lysinibacillus sphaericus C3-41] Length = 279 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 42/281 (14%), Positives = 93/281 (33%), Gaps = 41/281 (14%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--------- 51 M + L+ +L T+++N++N+ T GF+ + F+E++ N+ Sbjct: 1 MLRTMMTATNTMGQLQNKLDTISNNIANSSTTGFKAKEATFNELLYQQFNNDKLDRAERQ 60 Query: 52 ---IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF------ALESPRGIILTR 102 + S G+ +++ GS +T +LD A + E+ + TR Sbjct: 61 TPVGIRFGSGAMLGQIKSNQKQGSLQTTNRDLDLAFTKAKQYFNILMPNGENGTETVYTR 120 Query: 103 DGRFKVTDDGSLV------------SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ 150 G F ++ + +A+G+ L + + G+I + Sbjct: 121 QGDFYLSPLNNGTVMLVTAEGYPVANAAGQAITLPDNVQGFSVRNGGILEASYPNGDIIR 180 Query: 151 KGKVIATMGLYS---------VDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLED 201 + V + + + + + ++ G LE Sbjct: 181 TDLAVTEFQKPQLMEHVSGSYVGLPDNLAE-LGFTQAEVLTELVGANRQQIGMQGGTLEM 239 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 SN N EM ++I + + + ++ + I I Sbjct: 240 SNVNLSKEMTELIQTQRSYQFNARTVTLADQMLG-LINGIR 279 >gi|163794151|ref|ZP_02188124.1| hypothetical protein BAL199_02019 [alpha proteobacterium BAL199] gi|159180765|gb|EDP65284.1| hypothetical protein BAL199_02019 [alpha proteobacterium BAL199] Length = 240 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 62/242 (25%), Positives = 108/242 (44%), Gaps = 6/242 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M I L+ Q AL +++S VA+N++N +T F+ + + A K Q + FV Sbjct: 1 MDNPVYIALSRQTALRRQMSVVANNVANANTTAFKREVMIYQT--YAQKAPFTQTMDFVI 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + G+ T D + G +F ++ G TR+G F + LV+ G Sbjct: 59 DQGTATDQHQGNLKVTHNTFDMGINGPGYFQVDDGSGTKYTRNGTFTLDQQNRLVTQDGN 118 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 P+LD PI IP V + G I ++I +G+ ++ + +S + Sbjct: 119 -PILDTQGNPILIPSGGSDLTVSKDGVIRLGDQLIGRLGIVEFADNRILQKVRDSLFETD 177 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 P P ++ V +G +E SN N++ EM MI + + + + TL+D +K I+ Sbjct: 178 QVPEPAQESE---VMQGMIETSNVNAITEMTSMIDVHRAYEAAKTLLDREDKRQDTIIQR 234 Query: 241 IA 242 +A Sbjct: 235 LA 236 >gi|317047692|ref|YP_004115340.1| flagellar basal-body rod protein FlgF [Pantoea sp. At-9b] gi|316949309|gb|ADU68784.1| flagellar basal-body rod protein FlgF [Pantoea sp. At-9b] Length = 252 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 48/251 (19%), Positives = 89/251 (35%), Gaps = 14/251 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A ++ S A N++N T GFR + V + + V Sbjct: 1 MDHAIYTAMGAASQTLEQQSVTASNLANASTPGFRAQLEAYRAV--PVNGWSLPTRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G+ +TG LD A+ D W A+ + TR+G +++ G +++ G Sbjct: 59 ASTPGADMSAGAMDNTGRALDVAVGQDGWLAVRTADGSEAYTRNGNIQISSTG-ILTIQG 117 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV----DMSQGFVRRENS 175 + D + + + I G + AT+ + + Q R ++ Sbjct: 118 NPVMGDGGPIAVPQGAELTIAADGSITSRNPGDAPNATVQIGRLKLVKATGQELQRSDDG 177 Query: 176 GISPNIP-----PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 P L V V G LE SN + M MI ++F +I Sbjct: 178 MFRPTAQTQATRGAALAQDVNVQVSPGVLEGSNVKPVETMVDMIANARRFEMQMKVISNV 237 Query: 231 EKSMLEAIRNI 241 +++ +A + Sbjct: 238 DENEQKA-NQL 247 >gi|149189837|ref|ZP_01868117.1| putative flagellar basal-body rod protein [Vibrio shilonii AK1] gi|148836323|gb|EDL53280.1| putative flagellar basal-body rod protein [Vibrio shilonii AK1] Length = 243 Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 38/242 (15%), Positives = 91/242 (37%), Gaps = 4/242 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + ++N+SN DT GFR + + ++ + V Sbjct: 1 MDSLLFTATTGASRVLKAQHVRSNNLSNADTAGFRADMERVKSI--PLQGSGFDGRTMVV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + G + TG LD A+ G+ + ++++P TR G KV + G++ Sbjct: 59 TNSAATRFDAGDVVKTGRALDIAIMGEGYISVQTPTGNEAYTRAGNIKVDELGAMSINGF 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 + V + + + G + L V +++E+ + Sbjct: 119 AVVGDNGPMVLPEFQKVEISERGRVSVIPPGGGAEVEVGTLKLVKPDMNQLQKESDSLLH 178 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 ++ P V + +E SN +++ E+ ++ LT+ F ++ +++ ++ Sbjct: 179 SLDGQPFAADPTVNLAPEHIEGSNVSAIDELLSVMSLTRNFEMQIRMMKTA-ETLAQSGN 237 Query: 240 NI 241 + Sbjct: 238 KL 239 >gi|319650827|ref|ZP_08004964.1| FlhP protein [Bacillus sp. 2_A_57_CT2] gi|317397425|gb|EFV78126.1| FlhP protein [Bacillus sp. 2_A_57_CT2] Length = 275 Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 44/276 (15%), Positives = 97/276 (35%), Gaps = 35/276 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + L++++ V+ N++N DT G++ + F++++ N+ Sbjct: 1 MNRTMITATNTLAQLQKQMDIVSHNVANIDTAGYKRREANFTDLLFQQFNNQRNPNAETA 60 Query: 54 -------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-----ILT 101 ++ + + + G+ +T LD A + + + T Sbjct: 61 RLTPAGIRQGVGAKLAQSQIVMKQGALKATERPLDLAFTKEGQYFRVLEQTEEGAAVRFT 120 Query: 102 RDGRFKVTDDGSLVS---ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI----SQKGKV 154 R G F +T + PVLD + I I + + F V E G + Sbjct: 121 RTGAFYLTPVSDNETMLVTGDGLPVLDENNNSIIINGQAKNFKVTETGSFLAETANGSIQ 180 Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPL--------EDLSGVTVKRGFLEDSNANS 206 +G+ ++ Q ++ ++ + + + +G LE SN + Sbjct: 181 EFNLGVVLINKPQFLEQKGDNLLGLPDGVDGEGIYTELNGALRGQIGMAQGSLEQSNVDM 240 Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 EM +I+L + + + + ++ M I I Sbjct: 241 SKEMTDLINLQRAYQFQSRSVSMADQMMG-LINGIR 275 >gi|308186394|ref|YP_003930525.1| Flagellar basal-body rod protein flgF [Pantoea vagans C9-1] gi|308056904|gb|ADO09076.1| Flagellar basal-body rod protein flgF [Pantoea vagans C9-1] Length = 251 Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 48/251 (19%), Positives = 89/251 (35%), Gaps = 14/251 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V + + VA Sbjct: 1 MDHAIYTAMGAASQTLDQQAVTASNLANASTPGFRAQLNALRAV--PVSGWSLPTRTLVA 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G+ T LD A++ D W A+ + TR+G +++ G ++ G Sbjct: 59 ASTPGADMSQGAMDYTERPLDVAVQQDGWLAVRTADGSEAYTRNGNMQISPTG-TLTVQG 117 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV----DMSQGFVRRENS 175 + D + I + I G ++ AT+ L + Q R ++ Sbjct: 118 NPVMGDGGPIVIPQGTEITIAADGSITGLNAGDSPNATVQLGKLKLVRATGQELQRSDDG 177 Query: 176 GISPNIP-----PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 P L+ + + V G LE SN + M MI ++F +I Sbjct: 178 MFRPTASTQATRGAALQADATMQVMPGVLEGSNVKPVETMVDMIANARRFEMQMKVITNV 237 Query: 231 EKSMLEAIRNI 241 +++ +A + Sbjct: 238 DENEQKA-NQL 247 >gi|188576757|ref|YP_001913686.1| flagellar basal body rod protein FlgF [Xanthomonas oryzae pv. oryzae PXO99A] gi|188576949|ref|YP_001913878.1| flagellar basal body rod protein FlgF [Xanthomonas oryzae pv. oryzae PXO99A] gi|188521209|gb|ACD59154.1| flagellar basal-body rod protein FlgF [Xanthomonas oryzae pv. oryzae PXO99A] gi|188521401|gb|ACD59346.1| flagellar basal-body rod protein FlgF [Xanthomonas oryzae pv. oryzae PXO99A] Length = 230 Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 51/224 (22%), Positives = 89/224 (39%), Gaps = 10/224 (4%) Query: 22 VADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELD 81 ++ N++N DTVGF+ I+ + + G TG LD Sbjct: 1 MSHNLANVDTVGFKAALANTEAF--KIQGKGYPSRIDALHVDQGFDRSQGHQKVTGNPLD 58 Query: 82 FALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF 140 +L+ D W A++SP TR+G +T +G LV+A+G + + + P + Sbjct: 59 VSLQQDRWLAVQSPDGSEAYTRNGELALTANGQLVTANGHAVLDEGGNPMTIPPHQAMEI 118 Query: 141 NVGEKGEISQKGKVIATMG----LYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT--- 193 I +G+ TM + VD + R G+ N P + + T Sbjct: 119 GSDGSISIIPQGEGPQTMAIVGKMKVVDAPADRLTRRPDGLMRNTSTDPAQAFAVATGKT 178 Query: 194 VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + G LE SN ++ + +MI L ++F +I + + A Sbjct: 179 INSGMLEGSNVDAAGALVEMIQLQRQFEMQVKIIKNGDDNAQSA 222 >gi|229542505|ref|ZP_04431565.1| protein of unknown function DUF1078 domain protein [Bacillus coagulans 36D1] gi|229326925|gb|EEN92600.1| protein of unknown function DUF1078 domain protein [Bacillus coagulans 36D1] Length = 276 Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats. Identities = 45/277 (16%), Positives = 103/277 (37%), Gaps = 35/277 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S L+ ++ T++ N++N DT G+++ + F++++ N+ Sbjct: 1 MNQSMLTATNTLRQLQDKIDTISHNVANVDTNGYKSKQASFTDLLVQQINNQPDTSKETG 60 Query: 54 -------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF-----ALESPRGIILT 101 + + + +S G+ TG LD A + + + T Sbjct: 61 RKTPYGIRTGTGAKLAQAVISPSQGALEHTGRALDMAFTKENQYLKVLARANGSDEVAFT 120 Query: 102 RDGRFKVTDDGS---LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGE----ISQKGKV 154 R+G +V+ G+ +++ + PVLD + I + + G S + Sbjct: 121 RNGALEVSPLGNNRSVLTDANGNPVLDEHNAMITFRGNVADYAIRPNGTLQVAYSDGTRE 180 Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLE--------DLSGVTVKRGFLEDSNANS 206 +G+ + Q + N+ + S +++++G LE SN + Sbjct: 181 SFNLGVVQMRNPQVLEQVGNNLLRLPQNVNAANVYTDLTGATRSQISMQQGVLEKSNVDL 240 Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 E+ ++ + + + I +++ M + NI S Sbjct: 241 STEITELTKTERLYQFQSKTITLSDQMMG-LVNNIRS 276 >gi|255021355|ref|ZP_05293403.1| Flagellar basal-body rod protein flgF [Acidithiobacillus caldus ATCC 51756] gi|254969218|gb|EET26732.1| Flagellar basal-body rod protein flgF [Acidithiobacillus caldus ATCC 51756] Length = 246 Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats. Identities = 57/246 (23%), Positives = 101/246 (41%), Gaps = 9/246 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M T I + A+ +R + A+N++N +T GFR +F + + + A Sbjct: 1 MDT-LYIAMTGAKAILERQTATANNLANANTTGFRAEMAQFRAL--PVYGQGLPTRVYTA 57 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + E G + TG LD A+ G W A+++P TRDG +V G LV+A+G Sbjct: 58 TTGESWDFRSGPIVRTGRALDVAVNGPGWMAVQAPDGKEAYTRDGNLQVNGQGLLVTATG 117 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV----IATMGLYSVDMSQGFVRRENS 175 + + P G + +A + V+ +R+ + Sbjct: 118 HPVLGVNGTPISLPPMSHLTIGADGVISGIPAGNLPDGLMAINQIKLVNPPANQLRQSSD 177 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 G+ N+ + V ++ G LE SN N ++ M QM+ +++F T L+ + Sbjct: 178 GLFVNVDGKAAPEDGKVVLESGALEGSNVNPIHAMVQMLQDSRQFEMQTKLMQTISQ-DR 236 Query: 236 EAIRNI 241 +A I Sbjct: 237 DAANQI 242 >gi|254460576|ref|ZP_05073992.1| flagellar basal body FlaE domain protein [Rhodobacterales bacterium HTCC2083] gi|206677165|gb|EDZ41652.1| flagellar basal body FlaE domain protein [Rhodobacteraceae bacterium HTCC2083] Length = 267 Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats. Identities = 42/267 (15%), Positives = 86/267 (32%), Gaps = 31/267 (11%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI---DQKISFVA 60 F L+ +S V++N++N T FR F+++ + + Sbjct: 1 MFGTILSGMSTSMFEISVVSNNVANAGTTAFRKSNASFADLYNGTSPETVSRTATGTGSI 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-------IILTRDGRFKVTDDGS 113 + S + G + L+ AL G+ F +P + TRDG F + ++G Sbjct: 61 VEQTRQSAKQGGMMERDGVLNMALAGNGMFVTTTPNSDGTPSEVLSFTRDGEFSLDENGV 120 Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNV----------------GEKGEISQKGKVIAT 157 L S+ + Q F S+ +++ Sbjct: 121 LRSSKNDIVYGYDGLGGRGMQQLVVPFQNEDGAKLTALEVGSDGEMLATYGSEDPRLVGQ 180 Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQ 212 + + + + + + L +++ G LE SN + EM Sbjct: 181 IAIALFPNTTAMRQMGMNRFKESRESGELVLGVAGSEGFGSIQTGALESSNVDLTTEMTS 240 Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIR 239 MI Q+F+ + ++ + + R Sbjct: 241 MIRAQQQFSGSSRILQTYTDMIEKLTR 267 >gi|328958263|ref|YP_004375649.1| flagellar basal-body rod protein FlgG [Carnobacterium sp. 17-4] gi|328674587|gb|AEB30633.1| flagellar basal-body rod protein FlgG [Carnobacterium sp. 17-4] Length = 240 Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats. Identities = 42/242 (17%), Positives = 91/242 (37%), Gaps = 18/242 (7%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----------ISFVAS 61 A++ ++ V+++++N +T G+++ + F+E++ N S Sbjct: 1 MNAIQNQMDAVSNDIANINTTGYKSKNISFNELLLNDLNGEADYLSDTVQDAGINRGSKS 60 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASGK 120 G + GS IS + A+ G+ +F + G TRDG F V D S+ + +G Sbjct: 61 GVTSTNFTQGSLISDPNDYHLAIAGEGFFGVIGENGERYLTRDGAFHVNGDKSITNDNGD 120 Query: 121 YPVLDMASVPIQIPQKDEI--FNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178 + Q P+ D N ++ T+ L+ + + S Sbjct: 121 TLEIQTTIPTNQWPEGDVSIAENGEVTIHSENGSTLVGTIPLFHPAQTNALEPVGENKYS 180 Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 N ++++ +LE SN + + +M+ + ++ + ++ M I Sbjct: 181 YNGAF----GTGEGSIQQNYLEASNVDLASSITEMMLAQRSYSLNLKVAQGTDE-MASVI 235 Query: 239 RN 240 Sbjct: 236 NQ 237 >gi|119503645|ref|ZP_01625728.1| hypothetical protein MGP2080_03860 [marine gamma proteobacterium HTCC2080] gi|119460707|gb|EAW41799.1| hypothetical protein MGP2080_03860 [marine gamma proteobacterium HTCC2080] Length = 244 Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats. Identities = 52/237 (21%), Positives = 89/237 (37%), Gaps = 8/237 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M N+ + ++Q + V N++N+ T GF+ + + S + Sbjct: 1 MSNIANLAAQSAREIQQAQAVVTHNLANSGTTGFKADLYQAQSSYLNAADGTGTAGSNGS 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASG 119 + G+ TG +LD A+ GD WF + + G L+R G +V DG L A+G Sbjct: 61 AL----DYSAGAIAQTGRDLDVAITGDGWFQVVANDGTLALSRRGDLRVGTDGILKDATG 116 Query: 120 KYPVL---DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 K + ++ P + ++A L V+ + + G Sbjct: 117 KTIMGNAGPVSLPPYSSLSIGTDGTISIVPMGELPTNIVALDRLMLVNPPVEQLVKSADG 176 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 + LE + V V G LE SN + + M +MI L + F I E+ Sbjct: 177 MVRVEDMNRLEPDANVRVAVGALETSNVSPVGAMVEMITLARSFEQHIQTIKSAEEL 233 >gi|148980301|ref|ZP_01815988.1| putative flagellar basal-body rod protein [Vibrionales bacterium SWAT-3] gi|145961320|gb|EDK26630.1| putative flagellar basal-body rod protein [Vibrionales bacterium SWAT-3] Length = 244 Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats. Identities = 43/238 (18%), Positives = 77/238 (32%), Gaps = 5/238 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M A+N+S+ DTVGF+ + ++ Sbjct: 1 MNPILFSAAKGAERTMLAQHVRANNLSHADTVGFKALME--HSTPMRLEGSGFLTSVTSR 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFA---LESPRGIILTRDGRFKVTDDGSLVSA 117 + + G I T LD A+ GD + +E + TR G F++ +G L Sbjct: 59 TNSSINNFAQGEDIRTERPLDVAINGDGFITLEGVEDEPAELYTRAGNFRLDGNGQLYLG 118 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177 + D V N + L V + SG Sbjct: 119 ERRVMSTDGPMVLPDFEFVSVSSNGLVSITPIGGEASLEVGALKLVKPENEQMTMHASGH 178 Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 L + V V+ G+LE SN +S+ E+ ++ LT+++ ++ ++ Sbjct: 179 FVPKDGQVLAEDFSVQVRSGYLEASNVSSLEELVSIMSLTRQYEMQIEVMASADEIAQ 236 >gi|259908811|ref|YP_002649167.1| flagellar basal body rod protein FlgF [Erwinia pyrifoliae Ep1/96] gi|224964433|emb|CAX55942.1| Flagellar basal-body rod protein [Erwinia pyrifoliae Ep1/96] gi|283478793|emb|CAY74709.1| Flagellar basal-body rod protein flgF [Erwinia pyrifoliae DSM 12163] gi|310767291|gb|ADP12241.1| flagellar basal body rod protein FlgF [Erwinia sp. Ejp617] Length = 251 Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats. Identities = 50/251 (19%), Positives = 90/251 (35%), Gaps = 14/251 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V ++ + V Sbjct: 1 MDHAIYTAMGAASQTLDQQAVTASNLANASTPGFRAQLNAARAV--PVEGLSLPTRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G+ T LD A++GD W A+++ TR+G +V+ G ++ G Sbjct: 59 ASTPGADMSQGALDYTERALDVAMQGDGWLAVQNDDGTEAYTRNGNMQVSPTG-QLTVQG 117 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL---YSVDMSQGFVRRENSG 176 K + D + I + I G ++ AT+ L V + R + G Sbjct: 118 KAVMGDGGPIAIPQGAQITIAADGSITALNPGDAPNATVQLGKLKLVKAVGNELTRGDDG 177 Query: 177 ISPNIPPTPLEDL------SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + + V V G LE SN + M MI ++F +I Sbjct: 178 MFRVSAAAQAQRGATLPLDPTVKVMPGVLEGSNVKATQTMVDMIANARRFEMQMKIISSV 237 Query: 231 EKSMLEAIRNI 241 +++ +A + Sbjct: 238 DENEQKA-NQL 247 >gi|313905135|ref|ZP_07838504.1| fagellar hook-basal body protein [Eubacterium cellulosolvens 6] gi|313470038|gb|EFR65371.1| fagellar hook-basal body protein [Eubacterium cellulosolvens 6] Length = 336 Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats. Identities = 37/333 (11%), Positives = 94/333 (28%), Gaps = 94/333 (28%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M + + ++ + + +L + +N++N +T GF++ F + + Sbjct: 1 MLRAMDSAVSGLRSHQNKLDVLGNNIANVNTNGFKSQNYTFKDAMYQTSAASSGGARDAD 60 Query: 49 -----KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII---- 99 + + + + S + ++ G +F ++ + Sbjct: 61 GTATIGGTNPSQFGYGSVQGAIATDFTSSTPQYVGGFNASINGSGFFITKAANSTVALSG 120 Query: 100 ---------------------LTRDGRFKVTDDGSLVSASGKYPVLDMASVPI------- 131 TR G+F + +G +V A+ + + P Sbjct: 121 DHTTQANVEADSTILKNANFNYTRVGQFTIDANGYMVDANKNFVYGYQPTNPTTGTANNI 180 Query: 132 ---------------------------------------QIPQKDEIFNVGEKGEISQKG 152 Q+ I Sbjct: 181 SDPTSYDETRLVALRAPAEVSADGNTFSFAGQALQLKSVQVDNDGIIKATINNSNGDAMN 240 Query: 153 KVIATMGLYSVDMSQGFVRRENS------GISPNIPPTPLEDLSGVTVKRGFLEDSNANS 206 V+ + + + +G + N+ G + + + + ++ G+LE SN + Sbjct: 241 VVLGKVAIAAFQNQEGLAKAGNNTFNTRVGDNTGLLTATVPGGATPSLMGGYLEGSNVDL 300 Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E MI + F + LI +++ + E + Sbjct: 301 AKEFSDMITTERGFQANAKLITVSDEVLQELVN 333 >gi|89068730|ref|ZP_01156116.1| flagellar basal-body rod protein FlgF [Oceanicola granulosus HTCC2516] gi|89045693|gb|EAR51755.1| flagellar basal-body rod protein FlgF [Oceanicola granulosus HTCC2516] Length = 248 Score = 111 bits (277), Expect = 9e-23, Method: Composition-based stats. Identities = 53/246 (21%), Positives = 100/246 (40%), Gaps = 4/246 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M+ S I L+ +++ + A+NM+N +T GF+ ++ F + + +FV Sbjct: 1 MENSNYIALSLATVMQRSIDVAANNMANANTAGFKGERILFDSYLSPGDAGEENGATFVL 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASG 119 ++ G +TG LD AL+G WF+ + RDGRF V G+LV+ +G Sbjct: 61 DRGSFMDDSQGPVRNTGNVLDVALQGPGWFSYQTQDGQQAFGRDGRFAVDAQGNLVTQAG 120 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK-VIATMGLYSVDMSQGFVRRENSGIS 178 + P + + G +S + +G++ V + + R Sbjct: 121 ARVLDAGGQPIALPPDAVAELVIADDGTLSSPATGALGRLGVFDVPDLKSYTRIGAGMFV 180 Query: 179 PNIPPT--PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 V +G LE SN + EM +M+ + + + T L+ ++ + Sbjct: 181 APAEADVAAPLPDLATKVVQGALEGSNVQPIVEMTRMMAIQKSYEQATKLMGTGDELRKD 240 Query: 237 AIRNIA 242 A+R + Sbjct: 241 ALRRLG 246 >gi|320107041|ref|YP_004182631.1| flagellar hook-basal body protein [Terriglobus saanensis SP1PR4] gi|319925562|gb|ADV82637.1| flagellar hook-basal body protein [Terriglobus saanensis SP1PR4] Length = 249 Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 57/246 (23%), Positives = 97/246 (39%), Gaps = 8/246 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND------IDQ 54 M + LA Q L T A+N+SNT+TVGFR + F V+ + D Sbjct: 1 MDSGLYAAYNGLLARTQALDTAANNLSNTNTVGFRAQRDYFRGVLAGMPPGDLESQVGDA 60 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSL 114 SF G L G +TG LD AL+G +FA+++ G TRDG F DG+L Sbjct: 61 VNSFGILGGNTLDLSQGEITATGNPLDLALDGSGFFAVQTTHGTRYTRDGGFLRAADGTL 120 Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174 + G + I + ++ G ++ +G IA Sbjct: 121 ETRRGDGVLDATGKKIIVPSGEVQVGGDGTISVLTAEGSAIAGKLGILNFKGSDLSAEGA 180 Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 + TP S V+ G LE +N ++++ Q++ + ++ + ++ ++ Sbjct: 181 NLFVAREGATP--IASEARVQEGSLEGANQDAVHGTMQLLLMQRQAEMMQRAVNLFSNTL 238 Query: 235 LEAIRN 240 + Sbjct: 239 DKTAAE 244 >gi|292487940|ref|YP_003530815.1| flagellar basal-body rod protein FlgF [Erwinia amylovora CFBP1430] gi|292899159|ref|YP_003538528.1| flagellar basal-body rod protein FlgF [Erwinia amylovora ATCC 49946] gi|291199007|emb|CBJ46118.1| flagellar basal-body rod protein FlgF (proximal rod protein) [Erwinia amylovora ATCC 49946] gi|291553362|emb|CBA20407.1| Flagellar basal-body rod protein flgF [Erwinia amylovora CFBP1430] gi|312172061|emb|CBX80318.1| Flagellar basal-body rod protein flgF [Erwinia amylovora ATCC BAA-2158] Length = 251 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 49/251 (19%), Positives = 89/251 (35%), Gaps = 14/251 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V ++ + V Sbjct: 1 MDHAIYTAMGAASQTLDQQAVTASNLANASTPGFRAQLNAARAV--PVEGLSLPTRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G+ T LD A++GD W A+++ TR+G +V+ G +S G Sbjct: 59 ASTPGADMSQGALDYTERALDVAMQGDGWLAVQTADGSEAYTRNGNMQVSPTG-QLSVQG 117 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL---YSVDMSQGFVRRENSG 176 + D + I + I G ++ AT+ L V + R + G Sbjct: 118 NAVMGDGGPIAIPQGAQITIAADGSITALNPGDAPNATVQLGKLKLVKAVGNELTRGDDG 177 Query: 177 ISPNIPPTPLEDL------SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + + + V G LE SN + M MI ++F +I Sbjct: 178 MFRVSASAQAQRGATLPLDPTMKVMPGVLEGSNVKATQTMVDMIANARRFEMQMKVISSV 237 Query: 231 EKSMLEAIRNI 241 +++ +A + Sbjct: 238 DENEQKA-NQL 247 >gi|254455211|ref|ZP_05068645.1| flagellar basal body FlaE domain protein [Octadecabacter antarcticus 238] gi|198263495|gb|EDY87768.1| flagellar basal body FlaE domain protein [Octadecabacter antarcticus 238] Length = 267 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 42/267 (15%), Positives = 85/267 (31%), Gaps = 31/267 (11%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI---DQKISFVA 60 F L+ +S V++N++N T FR FS++ + Sbjct: 1 MFGTILSGMSTSMFEISVVSNNVANASTTAFRKSSASFSDLYSGASAETVSRTSTGVGSI 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-------IILTRDGRFKVTDDGS 113 + + + G+ + L+ AL G F +P + TRDG F + + G Sbjct: 61 VEQTRQNTKQGALMERDGVLNMALAGSGMFVTTTPNSDGTLSEALNFTRDGEFALDESGV 120 Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEIS----------------QKGKVIAT 157 L S++ + + F +++ Q KV Sbjct: 121 LRSSTNDIVYGFDGIGGTTLQKIVIPFVNETDTKLTSIEVGSDGLIEATYGEQGPKVAGQ 180 Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQ 212 + + + + + + +V+ G LE SN N E+ Sbjct: 181 LAVATFANASSLQQLGLGSFQASQASGAPSFGIAGSEGFGSVQVGKLEASNVNLTTELTS 240 Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIR 239 +I Q+F+ + ++ + + R Sbjct: 241 LIRAQQQFSGSSRILQAYSDMIEKLTR 267 >gi|15022422|dbj|BAB62243.1| flagellar protein [Treponema medium] Length = 280 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 31/142 (21%), Positives = 58/142 (40%), Gaps = 12/142 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S G++ + R+ + +N++N +T GF+ +V F +++ + + Sbjct: 1 MMRSLFSGVSGMQNHQTRMDVIGNNIANVNTTGFKRGRVNFQDLISQQLSGASRPNEEVG 60 Query: 56 -------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 V G+ STG D A++G+ +F L+S TR G F V Sbjct: 61 GVNPKEVGLGVMVASIDTVHTQGALQSTGINTDIAVQGNGFFVLKSGEKSFYTRAGAFGV 120 Query: 109 TDDGSLVSASGKYPVLDMASVP 130 DG++V+ + V + Sbjct: 121 DKDGTMVNPANGMRVQGWMAQE 142 >gi|188534169|ref|YP_001907966.1| flagellar basal body rod protein FlgF [Erwinia tasmaniensis Et1/99] gi|188029211|emb|CAO97083.1| Flagellar basal-body rod protein [Erwinia tasmaniensis Et1/99] Length = 251 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 50/251 (19%), Positives = 93/251 (37%), Gaps = 14/251 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V ++ + V Sbjct: 1 MDHAIYTAMGAASQTLDQQAVTASNLANASTPGFRAQLNAARAV--PVEGLSLPTRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119 + G+ T LD A++GD W A+++ TR+G +V+ G ++ G Sbjct: 59 ASTPGADMTQGALDYTERPLDVAMQGDGWLAVQTANGTEAYTRNGNMQVSPTG-QLTVQG 117 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ---GFVRRENSG 176 + D ++ I + I G ++ AT+ L + + Q + R + G Sbjct: 118 NAVMGDGGAIAIPQGSEITIAADGSITALNPGDPPNATVQLGRLKLVQARGNELTRGDDG 177 Query: 177 ISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + LE + V G LE SN + M MI ++F +I Sbjct: 178 MFRVSASTQAQRGATLEADPAMKVMPGVLEGSNVKATQTMVDMIANARRFEMQMKVISSV 237 Query: 231 EKSMLEAIRNI 241 +++ +A + Sbjct: 238 DENEQKA-NQL 247 >gi|114566393|ref|YP_753547.1| flagellar hook protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337328|gb|ABI68176.1| flagellar hook protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 475 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 34/215 (15%), Positives = 69/215 (32%), Gaps = 22/215 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S G++ + R+ + +N++N +T G++ +V F + + + Sbjct: 1 MMRSMYSGVSGLRNHQTRMDVIGNNIANINTAGYKKSRVVFQDTLYQTMRGATRPDSSGS 60 Query: 56 ---------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106 ++ +T LD ++GD +F + + TR G F Sbjct: 61 RGGTNPMGIGLGMSVSSIDQIHTGAPTTATNKLLDMGIDGDGYFMIRHGQQKYFTRAGNF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 ++ G+LV + Y V + + + + E + G + Sbjct: 121 ELDTKGNLVHTANGYYVQGWVTKIDPVTGQWNLDCSREVETVDISGLLAC--------DP 172 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLED 201 Q SG P D ++ G E Sbjct: 173 QATKEMSFSGNLDAEIPFKQVDPEDESIYPGTQES 207 Score = 85.7 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 19/133 (14%), Positives = 44/133 (33%), Gaps = 9/133 (6%) Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171 G+ V+ + + + I + GE +A + L G + Sbjct: 344 GNSVTEIAQNGYGMGSLSSYTVGIDGVIRGSYDNGETRD----LARVALARFQNPAGLTQ 399 Query: 172 RENSGISPNIPP-----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 + ++ +P + + LE SN + E MI + F + + + Sbjct: 400 LGGTMFQKSVNSGEAVVSPPTESGMGKIVPSSLEMSNVDLSEEFTDMIVTQRGFQANSRI 459 Query: 227 IDENEKSMLEAIR 239 I +++ + E + Sbjct: 460 ITTSDEMIQELVN 472 >gi|257871308|ref|ZP_05650961.1| flagellar basal-body rod protein flgG [Enterococcus gallinarum EG2] gi|257805472|gb|EEV34294.1| flagellar basal-body rod protein flgG [Enterococcus gallinarum EG2] Length = 260 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 40/245 (16%), Positives = 83/245 (33%), Gaps = 16/245 (6%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA---------IKNDIDQK 55 I + L+ L T A+N++N +T G++ F ++ N Sbjct: 7 LGISRSGLNHLQTNLDTTANNIANVNTNGYQAQTTHFQALMENAIGAEETLFNGNTAQYG 66 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSL 114 S A S G+ T LD A++G+ +F + G +L+R G F ++++ L Sbjct: 67 ASMGAKATTTTSFAQGNLAGTAQPLDLAIQGNGFFGVRDQTGQLLLSRAGNFHLSENKQL 126 Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174 V++ G + Q P +I +++ +G ++ Sbjct: 127 VNSEGYPVAMTTNVPTPQWPDAQQIAIDASGQLTTEENGQTRVLGQLTLYQPTNTENITP 186 Query: 175 SGISPNIPPT------PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228 G + +V +G L S + M ++ + + T + Sbjct: 187 VGNQLYSAGDQALLTSQTNPAAFGSVLQGQLVQSTVDLATSMTDLLTTQRAYGLNTKAMQ 246 Query: 229 ENEKS 233 ++ Sbjct: 247 TADEM 251 >gi|312962294|ref|ZP_07776785.1| flagellar basal-body rod protein FlgG [Pseudomonas fluorescens WH6] gi|311283221|gb|EFQ61811.1| flagellar basal-body rod protein FlgG [Pseudomonas fluorescens WH6] Length = 207 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 39/197 (19%), Positives = 72/197 (36%), Gaps = 15/197 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + L+T+++N++N T GF+ + +F +++ IK Sbjct: 1 MLPALWVAKTGLSAQDTNLTTISNNLANVSTTGFKRDRAEFQDLLYQIKKQPGAQSTQDS 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 Q + V + G+ TG LD A+ G +F + P G TRDG F Sbjct: 61 ELPSGLQLGTGVQIVGTQKNFSAGNLQQTGQPLDMAINGRGFFQILQPDGTTSYTRDGTF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 + +G +V+A+G + + V + +VI + Sbjct: 121 HLDSNGQIVTANGFSLEPAVIVPADAKTFTVGNDGTVSITVAGNPASQVIGNLQTADFIN 180 Query: 166 SQGFVRRENSGISPNIP 182 G N+ +P Sbjct: 181 PAGLQAMGNNLFRKPLP 197 >gi|68164545|gb|AAY87274.1| predicted flagellar proximal rod protein [uncultured bacterium BAC17H8] Length = 251 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 39/239 (16%), Positives = 77/239 (32%), Gaps = 6/239 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIK--VKFSEVVGAIKNDIDQKISF 58 M + S A N++N G+R + + + Sbjct: 1 MDKLIYTAFNTVNNIYDNRSVRAQNLANIAVPGYRRDLGAKSVGTAFLENFDTLQSRAMA 60 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSAS 118 V Y S ++G+ TG + D A+ GD +F ++ L+R G +V +G L + + Sbjct: 61 VQDDTNYFSTQLGTLSETGADTDIAIRGDGYFIVQGLGEPSLSRRGDLRVNAEGILENGT 120 Query: 119 GKYPV----LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174 + + + ++ + E ++ + S G L + + Sbjct: 121 SQKMLDAALQPIQVPAHRVIKVSEDGDIIIEPLGSDPGTEQLVARLAMTLAEGRELNKFA 180 Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 G T + + V LE SN N E+ I + + +I + Sbjct: 181 DGEIRLEDGTVPPVSADMRVVAKHLELSNVNVTEELINSIEDQRAYEINVKMIASASEL 239 >gi|320179223|gb|EFW54181.1| Flagellar basal-body rod protein FlgF [Shigella boydii ATCC 9905] Length = 251 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 48/252 (19%), Positives = 81/252 (32%), Gaps = 16/252 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N GFR V ++ + V Sbjct: 1 MDHAIYTAMGAASQTLNQQAVTASNLANASMPGFRAQLNALRAV--PVEGLSLPTRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G T LD AL+ D W A+++ TR+G +V G L Sbjct: 59 ASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQL--TIQ 116 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 + V+ A + G T+ V + V+R + Sbjct: 117 GHQVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDD 176 Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 GI L+ + V G LE SN N++ M MI ++F +I Sbjct: 177 GIFRLSAETQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISS 236 Query: 230 NEKSMLEAIRNI 241 + + A + Sbjct: 237 VDDNAGRA-NQL 247 >gi|192290239|ref|YP_001990844.1| hypothetical protein Rpal_1843 [Rhodopseudomonas palustris TIE-1] gi|192283988|gb|ACF00369.1| protein of unknown function DUF1078 domain protein [Rhodopseudomonas palustris TIE-1] Length = 273 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 43/271 (15%), Positives = 83/271 (30%), Gaps = 41/271 (15%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + A ++ N++N T F+ FS+++ Q V Sbjct: 6 ALWTATTGLQAQSAAFENISGNVANAQTTAFKATNTAFSDLIYP-----PQVSDTVLWRS 60 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPR-------------GIILTRDGRFKVTD 110 + + GS A+ G+ +F +E+P TR G F + Sbjct: 61 VLTNGQQGSISYDPVSTHMAIGGEGYFTVEAPSGVSASGQPTFSTSETTYTRRGDFDL-K 119 Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV---------------- 154 +G LV+ +G Y + + G + Sbjct: 120 NGYLVNGAGYYLMGSQIDPVTGAVGSTGPLQFDTSTALPDLGVLQSLSVSSSGKLQGTYS 179 Query: 155 ------IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMY 208 +A++ + S + SP P ++ TV LE SN + Sbjct: 180 KGQTVDVASLSIASFAGQGFMKQGSGGTFSPTPQSGPALYVNAGTVVGSALEASNVDIAD 239 Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +M M+ Q +++ T ++ + + ML Sbjct: 240 QMTTMVQAQQAYSACTRVVTASNEMMLTMTS 270 >gi|227873523|ref|ZP_03991768.1| possible flagellar basal body rod protein [Oribacterium sinus F0268] gi|227840613|gb|EEJ50998.1| possible flagellar basal body rod protein [Oribacterium sinus F0268] Length = 263 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 47/263 (17%), Positives = 98/263 (37%), Gaps = 22/263 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------Q 54 M SF +G A ++++ +++N++N + F+ FS+++ ND Q Sbjct: 1 MNMSFYVGALGADASQKKMGVISNNLANINNTAFKPKNAIFSDLINYNLNDSPEAKTDLQ 60 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEG-DAWFALESPR--GIILTRDGRFK---V 108 + A + +F +TG D+A+ +A+F L+ P I TR+G F + Sbjct: 61 AEAGTAVVRTNTEYSPAAFHTTGQPNDYAIGNANAFFKLQDPSSGEITYTRNGHFHAGEM 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNV-------GEKGEISQKGKVIATMGLY 161 D + VLD + + +V +G+Y Sbjct: 121 PDGKFYLFTESGKHVLDENGKKMLADDTALKAIEAAGQTGGNTANANNATEEVKQKIGVY 180 Query: 162 SVDMSQGFVRRENS--GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 +++ V + ++ I P + ++ G LE S + EM ++I + Sbjct: 181 TINYPSRLVNKGDNELAIRPGDQNNKDSVIQNPILESGTLESSGTDMAKEMTRLIESQRA 240 Query: 220 FNSITTLIDENEKSMLEAIRNIA 242 F ++ +++ I + Sbjct: 241 FTYALKMVQTSDEV-EGTINQLR 262 >gi|15616299|ref|NP_244604.1| flagellar hook-basal body protein [Bacillus halodurans C-125] gi|10176361|dbj|BAB07456.1| flagellar hook-basal body protein [Bacillus halodurans C-125] Length = 280 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 52/280 (18%), Positives = 93/280 (33%), Gaps = 39/280 (13%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50 M S L+++L T++ N++N++T G++ + FS+++ N Sbjct: 1 MNLSMISASVTMGELQKKLDTLSHNIANSNTTGYKRREASFSDLLFQQVNTNKATQYETG 60 Query: 51 ----DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-----PRGIILT 101 + + S + L E G+ +T LDFA+ + F LT Sbjct: 61 RLTPNGIRVGSGAKVSQTALRMEQGTLTTTDRALDFAIANPSSFFEIETVVDGNPVTRLT 120 Query: 102 RDGRFK-----VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK--- 153 RDG F D+ + +LD A I IP E + ++G + Sbjct: 121 RDGAFYLTANPNNDNLLQLVTQNGDYLLDSAGNRINIPATFEEITLTDQGTLQVTMPNGA 180 Query: 154 --VIATMGLYSVDMSQGFVRRENSGI---------SPNIPPTPLEDLSGVTVKRGFLEDS 202 A + L V Q + G V +G LE S Sbjct: 181 NVQAAQLQLIQVMKPQLLEAVGGNMFQLPDLAALGFAENEVYAAVGAGGGAVVQGTLEGS 240 Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 N + EM +I + + + ++ M + + Sbjct: 241 NVDIGREMTDLIETQRNYQFNARSVSMADQMMG-LVNGLR 279 >gi|149183417|ref|ZP_01861850.1| FlhP [Bacillus sp. SG-1] gi|148848862|gb|EDL63079.1| FlhP [Bacillus sp. SG-1] Length = 278 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 44/279 (15%), Positives = 93/279 (33%), Gaps = 38/279 (13%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + L++++ + N++N+DT G++ + FSE++ +++ Sbjct: 1 MNRTMIGATNTLNQLQKQMDIIGHNLANSDTNGYKRREAMFSELLFQQVSNLKGEKDANT 60 Query: 54 -------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF-----ALESPRGIILT 101 ++ + ++ G+ +TG LDFAL F E + T Sbjct: 61 RLTPGGIRQGVGAKLAQSEINLAQGALKATGRSLDFALTSRNQFFKVLVQGEDGADVRYT 120 Query: 102 RDGRFKVTDDG----SLVSASGKYPVLDMASVPIQIPQKDEIF--------NVGEKGEIS 149 RDG F G LV+ G + + + + + G Sbjct: 121 RDGAFYANPIGNGEMMLVNGQGHAVLDENDNFITFTEAEMNSQDISLGDSGQLTIGGTPF 180 Query: 150 QKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVK------RGFLEDSN 203 G V + + Q + + + + ++ + LE SN Sbjct: 181 NLGIVSVEKPQFMQQVGQNLLGLPDDLQGFGVNENEILTSLEGALRDNIGLAQSTLEGSN 240 Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 + EM M+++ + + + I ++ M I I Sbjct: 241 VDIGKEMTDMLNVQRAYQFQSRSISMADQMMG-LINGIR 278 >gi|257871307|ref|ZP_05650960.1| flagellar hook-basal body complex protein [Enterococcus gallinarum EG2] gi|257805471|gb|EEV34293.1| flagellar hook-basal body complex protein [Enterococcus gallinarum EG2] Length = 233 Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats. Identities = 40/256 (15%), Positives = 90/256 (35%), Gaps = 39/256 (15%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV-------------GA 47 M ++ L++R T + N++N +T G++ K F + Sbjct: 1 MIRGLDVLSRNISLLQKRQETTSGNIANVNTTGYQA-KALFQSALDEVALHNYQSGPNAD 59 Query: 48 IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 + DI +S++ G+ TG DFAL + +F +++ G TR+G F Sbjct: 60 TRRDIGGLSLGTQLAGSTISQDQGAVKQTGQASDFALLSEGYFVVQNNAGQRLYTRNGDF 119 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 V V+ G + + + Sbjct: 120 TVNQQNQYVTQEGYLVLGANGQAVSALGPANFQIQSFP---------------------P 158 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 + + ++ N +++ +++G LE +N + EM MI +++F + + Sbjct: 159 EALTTDGQNYVTSNAAG---TNVNAPVIQQGALEQANVSVADEMVAMIQTSREFEANQKV 215 Query: 227 IDENEKSMLEAIRNIA 242 + +++ +A+ + Sbjct: 216 LSSTNQTLQKAVNELG 231 >gi|311280016|ref|YP_003942247.1| fagellar hook-basal body protein [Enterobacter cloacae SCF1] gi|308749211|gb|ADO48963.1| fagellar hook-basal body protein [Enterobacter cloacae SCF1] Length = 251 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 81/252 (32%), Gaps = 16/252 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + A N++NT T GFR V + + VA Sbjct: 1 MDHAIYTAMGGASQTLDMQAVTASNLANTSTPGFRAQLTALRAV--PVVGQSVPTRTLVA 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 G T LD AL+ D W A+++ TR+G +VT G L Sbjct: 59 GSTPGADMTPGQLDYTARPLDVALQQDGWLAVQTADGSEGYTRNGNIQVTPTGQL--TIQ 116 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENS 175 PV+ A + G T+ V + V R + Sbjct: 117 GNPVIGEAGPIAVPEGSEVTIASDGTVSALNPGDPANTIAPVGRLKMVKATNTEVARGDD 176 Query: 176 GISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 G+ L+ V ++ G LE SN ++ M MI ++F +I Sbjct: 177 GMFRLTAAAQATRGPVLQADQSVRLQSGVLEGSNVKAVAAMADMISSARRFEMQMKVISS 236 Query: 230 NEKSMLEAIRNI 241 + + +A + Sbjct: 237 VDTNEQKA-NQL 247 >gi|225159023|ref|ZP_03725333.1| protein of unknown function DUF1078 [Opitutaceae bacterium TAV2] gi|224802402|gb|EEG20664.1| protein of unknown function DUF1078 [Opitutaceae bacterium TAV2] Length = 261 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 46/251 (18%), Positives = 95/251 (37%), Gaps = 16/251 (6%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK------NDIDQKISF 58 ++A + L + +N++N +T G+++ +S+ + Q + Sbjct: 7 LTSSVSALSNFTEGLEVIGNNIANVNTTGYKSSSASYSDSFSNTLRAATSVDSSRQTGTG 66 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG--IILTRDGRFKVTDDGSLVS 116 V + GS +TG D A+ G+ +F ++ P +TRDG FK D+G LV+ Sbjct: 67 VQLAGISTNYTQGSISTTGVSTDLAISGEGYFIVQDPNSGAQYITRDGSFKFDDNGYLVN 126 Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ-----KGKVIATMGLYSVDMSQGFVR 171 ASG + ++ + ++ G +S +AT+GL V ++ Sbjct: 127 ASGLRVLDSASAPIQIPTTGVQSKSISSNGAVSYVDTAGVTHTVATVGLAQVADQAKLMK 186 Query: 172 RENSGI---SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228 + + + K LE S + E+ MI + F + ++ Sbjct: 187 EGGNLYDYSATTVAIGIPGSNGTGAFKTYSLELSKVDLTAELPNMITMQGSFQANARMVT 246 Query: 229 ENEKSMLEAIR 239 ++ + + Sbjct: 247 VSDTIFDDIVN 257 >gi|88704305|ref|ZP_01102019.1| flagellar basal-body rod protein FlgF [Congregibacter litoralis KT71] gi|88701356|gb|EAQ98461.1| flagellar basal-body rod protein FlgF [Congregibacter litoralis KT71] Length = 251 Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats. Identities = 52/241 (21%), Positives = 93/241 (38%), Gaps = 10/241 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M I A + A N++N TVGF+ V+ V ++ + ++ Sbjct: 1 MDHFVYIAAAGAKESMLAQAANAHNLANASTVGFKADLVEAETVY--LRGAGQETRAYNV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-----PRGIILTRDGRFKVTDDGSLV 115 E G TG +LD A+ G+ WFA+++ G +TR G F++ + G LV Sbjct: 59 IQGTGTDFEQGVIEQTGRDLDLAINGEGWFAVQALTGEGNGGEGVTRRGDFRIDEFGQLV 118 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ---KGKVIATMGLYSVDMSQGFVRR 172 + +G+ + + + + I + G + V + V+ + + + Sbjct: 119 NGAGQALLGNDGPIALPPFSSLSIGSDGTVSIVPLGELPNAVAVLDRIKMVNPASEDLSK 178 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 G P V + G LE SN N + M +MI L+++F L+ E Sbjct: 179 GEDGFFRTDSDLPTPADGNVRLVSGALESSNVNPVTAMVRMIELSRQFEHYVKLMKTAED 238 Query: 233 S 233 Sbjct: 239 V 239 >gi|39934722|ref|NP_946998.1| flagellar basal-body rod protein FlgG [Rhodopseudomonas palustris CGA009] gi|39648572|emb|CAE27093.1| possible flagellar basal-body rod protein FlgG [Rhodopseudomonas palustris CGA009] Length = 273 Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats. Identities = 43/271 (15%), Positives = 84/271 (30%), Gaps = 41/271 (15%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + A ++ N++N T F+ FS+++ Q V Sbjct: 6 ALWTATTGLQAQSAAFENISGNVANAQTTAFKATNTAFSDLIYP-----PQVSDTVLWRS 60 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPR-------------GIILTRDGRFKVTD 110 + + GS A+ G+ +F +E+P TR G F++ Sbjct: 61 VLTNGQQGSISYDPVSTHMAIGGEGYFTVEAPSGVSASGQPTFSTSETTYTRRGDFEL-K 119 Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV---------------- 154 +G LV+ +G Y + + G + Sbjct: 120 NGYLVNGAGYYLMGAQIDPVTGAVGSTGPLQFDTSTALPDLGVLQSLSVSSSGKLQGTYS 179 Query: 155 ------IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMY 208 +A++ + S + SP P ++ TV LE SN + Sbjct: 180 KGQTVDVASLSIASFAGQGFMKQGSGGTFSPTPQSGPALFVNAGTVVGSALEASNVDIAD 239 Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +M M+ Q +++ T ++ + + ML Sbjct: 240 QMTTMVQAQQAYSACTRVVIASNEMMLTMTS 270 >gi|88858142|ref|ZP_01132784.1| flagellar biosynthesis; cell-proximal portion of basal-body rod [Pseudoalteromonas tunicata D2] gi|88819759|gb|EAR29572.1| flagellar biosynthesis; cell-proximal portion of basal-body rod [Pseudoalteromonas tunicata D2] Length = 255 Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats. Identities = 46/249 (18%), Positives = 92/249 (36%), Gaps = 15/249 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M I ++ ++ A+N++N TVGF++ + + + F Sbjct: 1 MDKLLYISMSGAKQNLLGVAVNANNLANAKTVGFKSDFEQARSM--QAFGEGLPTRVFAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119 + +G+ +TG LD A+ G W + TR G ++T G L++A G Sbjct: 59 EERPGSKMAMGALSTTGRNLDVAVSGGGWLVVQDQNGEEAFTRGGNLQITSTGQLLTAKG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS-----VDMSQGFVRREN 174 + + + + + +P + + ++ +G + + V +Q + + Sbjct: 119 EAVIGEGGPIILPVPLEKVQISTDGTIQVRPQGAPASFLEDVERLKVVVPQNQNLLEKGL 178 Query: 175 SGISPNIPPTPL-------EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 G+ + + V V G LE SN N + EM MI ++F ++ Sbjct: 179 DGLFRPKDKSTFKDQCDFCDTNLEVQVISGALEMSNVNPVDEMVGMIAHQRQFELQVKMM 238 Query: 228 DENEKSMLE 236 EK Sbjct: 239 KTAEKMDES 247 >gi|299822258|ref|ZP_07054144.1| flagellar basal body rod protein FlgG [Listeria grayi DSM 20601] gi|299815787|gb|EFI83025.1| flagellar basal body rod protein FlgG [Listeria grayi DSM 20601] Length = 259 Score = 109 bits (271), Expect = 5e-22, Method: Composition-based stats. Identities = 42/251 (16%), Positives = 89/251 (35%), Gaps = 16/251 (6%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV--------VGAIKNDID 53 IG A + + L ++N++N++T GF+ ++ + I Sbjct: 1 MKGLYIGAAGMMNYMKHLDVHSNNIANSETAGFKFDQLTSQAMSRKQVQFNQADSAKTIG 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALE------GDAWFALESPRGIILTRDGRFK 107 V + +++ + GS TG +LDF L G ++F LTR G F Sbjct: 61 SVDYAVHPNQTFVNLKQGSMQVTGRDLDFFLHDADSEAGSSFFVAGKDGETFLTRGGSFY 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 +G L ++ G + + + Q + + +++ + + Q Sbjct: 121 SDQNGFLKTSDGANLLAENGTAIQVGAQTKITVDTAGNIRRADTNELLGKLQTKFIAADQ 180 Query: 168 -GFVRRENSGISPNIPPT-PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225 G + + G T ++ G LE SN + EM +++ + + + Sbjct: 181 RGNLEKNGLGQLTLKTGTIQGLPAGRALIQNGVLESSNVDMSTEMVELMDNQRMVQASSN 240 Query: 226 LIDENEKSMLE 236 +I + + Sbjct: 241 IIKMFDTVYDK 251 >gi|213421404|ref|ZP_03354470.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 197 Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats. Identities = 35/197 (17%), Positives = 63/197 (31%), Gaps = 15/197 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M +S I A + + +A+N++N T GF+ + F +++ Sbjct: 1 MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V G+ T D A++G +F + P G TRDG F Sbjct: 61 TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGTSAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V +G LV+A G + + V + + + L + Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMN 180 Query: 166 SQGFVRRENSGISPNIP 182 G + Sbjct: 181 DTGLESIGENLYIETQS 197 >gi|291617021|ref|YP_003519763.1| FlgF [Pantoea ananatis LMG 20103] gi|291152051|gb|ADD76635.1| FlgF [Pantoea ananatis LMG 20103] Length = 252 Score = 108 bits (269), Expect = 7e-22, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 87/251 (34%), Gaps = 14/251 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V + + V Sbjct: 1 MDHAIYTAMGAASQTLDQQAVTASNLANASTPGFRAQLNALRAV--PVNGWSLPTRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G+ T LD A++ D W A+ + TR+G ++ DG ++ G Sbjct: 59 ASTPGADMSQGAMDYTERPLDVAMQQDGWLAVRTADGSEAYTRNGNMQIRSDG-TLTVQG 117 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG----FVRRENS 175 + + + I + I G ++ AT+ L + + Q R ++ Sbjct: 118 NPVMGEGGPIVIPQGSEITIAADGSITGLNAGDSPNATVQLGRLKLVQATGKELQRGDDG 177 Query: 176 GISPNIP-----PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 P L+ + V G LE SN + M MI ++F +I Sbjct: 178 MFRPTAATQATRGAALQADPTMQVMPGVLEGSNVKPVETMVDMIANARRFEMQMKVISNV 237 Query: 231 EKSMLEAIRNI 241 ++ +A + Sbjct: 238 NENEQKA-NQL 247 >gi|297617147|ref|YP_003702306.1| fagellar hook-basal body protein [Syntrophothermus lipocalidus DSM 12680] gi|297144984|gb|ADI01741.1| fagellar hook-basal body protein [Syntrophothermus lipocalidus DSM 12680] Length = 487 Score = 108 bits (269), Expect = 7e-22, Method: Composition-based stats. Identities = 29/136 (21%), Positives = 53/136 (38%), Gaps = 12/136 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S G++ + R+ + +N++N +TVG++ + F + Sbjct: 1 MMRSMYAGVSGLRTHQLRMDVIGNNIANVNTVGYKKSRAIFKDAFYQAIRGGSAPTGARG 60 Query: 56 -------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 V + GS +TG D A++G+ +F LES TR G F Sbjct: 61 GTNPQAIGLGVQLSSVDVIATPGSAQTTGKNTDLAIDGNGYFILESGGERYYTRAGAFDF 120 Query: 109 TDDGSLVSASGKYPVL 124 G+ V++ G + + Sbjct: 121 DVLGNYVASGGLHVMG 136 Score = 89.2 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 17/129 (13%), Positives = 41/129 (31%), Gaps = 5/129 (3%) Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 + +G D + + V + +A + L G + + + Sbjct: 356 TFTGWAEYQDGYTKGDLRSITIDQNGVILGVYSNGITDNLARVALAVFQNPAGLLAKGGN 415 Query: 176 GISPNIPPTPLEDLS-----GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + + + + G LE SN + E MI + F + + +I + Sbjct: 416 LFQVSNNSGDPKVGAPGEEAMGAILPGSLEMSNVDLSEEFTDMIVTQRGFQANSRIITTS 475 Query: 231 EKSMLEAIR 239 ++ + E + Sbjct: 476 DEMLQELVN 484 >gi|317133480|ref|YP_004092794.1| flagellar hook-basal body protein [Ethanoligenens harbinense YUAN-3] gi|315471459|gb|ADU28063.1| flagellar hook-basal body protein [Ethanoligenens harbinense YUAN-3] Length = 326 Score = 108 bits (269), Expect = 8e-22, Method: Composition-based stats. Identities = 42/322 (13%), Positives = 86/322 (26%), Gaps = 84/322 (26%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI------DQK 55 + N + A + + + +N++N +T GF+ + FS++ Q Sbjct: 1 MRALNSAVTGLQAQQTAMDVIGNNIANVNTDGFKASRTDFSDLFYQTLQGGTDNTNATQV 60 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI----------------I 99 V +T + + G+ +F + + Sbjct: 61 GYGVKVSGVSKDMSTTGETTTNVPTNLFINGEGYFIVSTDSASHTAGSTTNSSGATVADY 120 Query: 100 LTRDGRFKVTDDGSLVSASGKYPVLDMAS-------------VPIQIPQKDEIFNVGEKG 146 TR G F+ G LV A+G Y + A+ I F+ G Sbjct: 121 YTRVGNFQKNASGYLVDANGNYVMGMDATSLAAYQADPTSLPTLHAISLIGATFHPTAAG 180 Query: 147 EISQKGKVIATMGLY-------------SVDMSQGFVRRENSGISPNIPPTPLEDLSGVT 193 + + ++ S G S + + ++ T Sbjct: 181 TSTSSDVTVTANTNISDLTINSDGTISGTIGSSTGTFEYGTSNGATTASASDPIIVALAT 240 Query: 194 ------------------VKRG---FLEDSN---------------ANSMYEMGQMIHLT 217 V G +++ SN + E MI Sbjct: 241 FPNDGGLSQAGNTSFTQSVSSGSPTYIQASNGNSTTLISGALEQSNVDLAREFTNMIVTQ 300 Query: 218 QKFNSITTLIDENEKSMLEAIR 239 + F + + +I + + E + Sbjct: 301 RGFQANSRVITVADSLLEEIVN 322 >gi|226327743|ref|ZP_03803261.1| hypothetical protein PROPEN_01616 [Proteus penneri ATCC 35198] gi|225203447|gb|EEG85801.1| hypothetical protein PROPEN_01616 [Proteus penneri ATCC 35198] Length = 153 Score = 108 bits (269), Expect = 8e-22, Method: Composition-based stats. Identities = 30/136 (22%), Positives = 53/136 (38%), Gaps = 14/136 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S I A + + +++N++N T GF+ + F +++ Sbjct: 1 MIRSLWIAKTGLDAQQTNMDVISNNLANVSTNGFKRQRAVFEDLLYQTIRQPGAMTSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 Q + V G+ T D A++G +F ++ P G TRDG F Sbjct: 61 NAPSGLQIGTGVRPVATERLHSQGNLAQTNGTRDVAIKGQGFFHVQLPDGTDAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYP 122 ++ +G LV+ SG Sbjct: 121 QMDQNGQLVTTSGFQV 136 >gi|327393472|dbj|BAK10894.1| flagellar basal-body rod protein FlgF [Pantoea ananatis AJ13355] Length = 252 Score = 108 bits (268), Expect = 9e-22, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 87/251 (34%), Gaps = 14/251 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V + + V Sbjct: 1 MDHAIYTAMGAASQTLDQQAVTASNLANASTPGFRAQLNALRAV--PVNGWSLPTRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G+ T LD A++ D W A+ + TR+G ++ DG ++ G Sbjct: 59 ASTPGADMSQGAMDYTERPLDVAMQQDGWLAVRTADGSEAYTRNGNMQIRSDG-TLTVQG 117 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG----FVRRENS 175 + + + I + I G ++ AT+ L + + Q R ++ Sbjct: 118 NPVMGEGGPIVIPQGSEITIAADGSITGLNAGDSPNATVQLGRLKLVQATGKELQRGDDG 177 Query: 176 GISPNIP-----PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 P L+ + V G LE SN + M MI ++F +I Sbjct: 178 MFRPTAATQATRGAALQADPNMQVMPGVLEGSNVKPVETMVDMIANARRFEMQMKVISNV 237 Query: 231 EKSMLEAIRNI 241 ++ +A + Sbjct: 238 NENEQKA-NQL 247 >gi|288554367|ref|YP_003426302.1| flagellar hook-basal body protein [Bacillus pseudofirmus OF4] gi|288545527|gb|ADC49410.1| flagellar hook-basal body protein [Bacillus pseudofirmus OF4] Length = 281 Score = 108 bits (268), Expect = 9e-22, Method: Composition-based stats. Identities = 46/281 (16%), Positives = 88/281 (31%), Gaps = 40/281 (14%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS--- 57 M S L++++ T++ NM+N++T GF+ + FS+++ N+ Sbjct: 1 MNLSMISASVTMGQLQRKMDTLSHNMANSNTTGFKRREATFSDLLFQQVNNNTDTRYETG 60 Query: 58 -----------FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-----ILT 101 + L E G+ +T LDFA+ F LT Sbjct: 61 RLTPNGIRVGAGAKIAQTALRMEQGAIQNTDRRLDFAITQPNHFFEVQSVENGQAVNRLT 120 Query: 102 RDGRFKVT-----DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGE--------- 147 R+G F + + + +LD +P + GE Sbjct: 121 REGAFYLNEDPDNPGQLTIVNANGEYLLDGGGNRFTLPMNFSDIQLSPTGELRVTLNDNV 180 Query: 148 ------ISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLED 201 Q V+ L +V + + + + + + LE Sbjct: 181 TTEELGQVQLIHVLKPHLLEAVGDTHFTIPNLENLGLMDADMFEQVPGDEGRLMQNALEQ 240 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 SN N EM +++ + + + ++ M I I Sbjct: 241 SNVNIAQEMNELLQTQRHYQFNARALSMADE-MNGLINGIR 280 >gi|218507129|ref|ZP_03505007.1| flagellar basal body rod protein FlgG [Rhizobium etli Brasil 5] Length = 217 Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 33/174 (18%), Positives = 63/174 (36%), Gaps = 7/174 (4%) Query: 75 STGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQI 133 TG +LD AL G +F ++S + TR G F D G LV+ G + + Sbjct: 43 QTGNDLDVALIGKGFFQIQSTDGTTLYTRAGAFNKNDQGQLVTVDGYEVLPGITIPTGST 102 Query: 134 PQKD-EIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSG- 191 V K + V+ + L G ++ + Sbjct: 103 ELTISRSGEVSVKLPGATDTTVLGQLTLADFVNEAGLQPIGDNLFQETAASGEAVVGNPD 162 Query: 192 ----VTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 +K+G+LE SN + + E+ ++I + + + +I ++ +N+ Sbjct: 163 EEGFAYMKQGYLESSNVDPVKEITELISAQRAYEMNSKVITTADEMASIVSKNL 216 >gi|119947176|ref|YP_944856.1| flagellar basal-body rod protein FlgF [Psychromonas ingrahamii 37] gi|119865780|gb|ABM05257.1| flagellar basal-body rod protein FlgF [Psychromonas ingrahamii 37] Length = 243 Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 48/244 (19%), Positives = 83/244 (34%), Gaps = 5/244 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + L A+NM+ +T+GF+ + V D Sbjct: 1 MNPILFTAATSASKLMISQHVRANNMAQVNTIGFKAVLE--RTVPVFRTGDGFLSSVTSR 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 S + G TG LD A+ GD +FA+ TR G K + DG L + Sbjct: 59 SNSTSIDFSHGKLSQTGRPLDVAITGDGFFAVRGNDGKESYTRAGNIKASADGELSVNNN 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 + + Q I N G +S G +G + N+ Sbjct: 119 ALLGTGGEQLVLPEHQSLTISNKGIITVMSNGGGASIEVGQIKLVNPDTNKLTLNTS-GT 177 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 PLE V + +LE +N + + EM ++ T+++ ++ ++ + A Sbjct: 178 FSSAVPLEASPDVEMTSEYLESANVSVISEMIGVMTATRQYEMQVKMMKAADQLIA-AGN 236 Query: 240 NIAS 243 + S Sbjct: 237 KLIS 240 >gi|331005470|ref|ZP_08328849.1| hypothetical protein IMCC1989_1994 [gamma proteobacterium IMCC1989] gi|330420746|gb|EGG95033.1| hypothetical protein IMCC1989_1994 [gamma proteobacterium IMCC1989] Length = 245 Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 41/248 (16%), Positives = 97/248 (39%), Gaps = 11/248 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV------VGAIKNDIDQ 54 M + +I + Q+L ++ N++N T ++ + Sbjct: 1 MD-AISISAISMQNDLQKLDQLSHNVANMSTPAYKRTLSATESFTNTVSRFESPNRVAST 59 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSL 114 + + + GS ST LD A+EGD +F L + G ++ G F + ++G + Sbjct: 60 IQNAIPTISTSRDFTTGSLSSTSNPLDLAIEGDGFFELTNNTGTFYSKRGNFLIDNNGQV 119 Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174 + + + ++ I +D + G+I + GK ++ + + + D + Sbjct: 120 KLSGTELLLNGVSGD---IRLQDAEPEINSLGQIFENGKEVSQIRVINFDNPSSLIS-LG 175 Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 GI + +++ ++++ FLE SN+ +M +I L + + +I + + Sbjct: 176 QGIFKVSEASVQKEVELPSIRQSFLEASNSQPAEDMLNLIQLARHIEATQQVIRGYDGML 235 Query: 235 LEAIRNIA 242 ++ Sbjct: 236 ATVFEDLG 243 >gi|257866396|ref|ZP_05646049.1| flagellar hook-basal body complex protein [Enterococcus casseliflavus EC30] gi|257873088|ref|ZP_05652741.1| flagellar hook-basal body complex protein [Enterococcus casseliflavus EC10] gi|257800354|gb|EEV29382.1| flagellar hook-basal body complex protein [Enterococcus casseliflavus EC30] gi|257807252|gb|EEV36074.1| flagellar hook-basal body complex protein [Enterococcus casseliflavus EC10] Length = 233 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 40/256 (15%), Positives = 88/256 (34%), Gaps = 39/256 (15%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV-------------GA 47 M ++ L++R T + N++N +T G++ K F + Sbjct: 1 MIRGLDVLSRNISLLQKRQETTSGNIANVNTTGYQA-KTLFQSALDEVALHNYQGGPNAD 59 Query: 48 IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 + DI +S++ G+ TG DFAL + +F +++ G TR+G F Sbjct: 60 TRRDIGGLSLGTQLAGSTISQDQGAVKQTGQASDFALLSEGYFVVQNNAGQRLYTRNGDF 119 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 V V+ G + + + + Sbjct: 120 TVNQQNQYVTQEGYLVLGANGQAVSALGPANFLIQTFP---------------------P 158 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 + + ++ N ++ +++G LE +N EM MI +++F + Sbjct: 159 EALTTAGQNYVTSNAAG---TTVNAPVIQQGALEQANVAVADEMVAMIQTSREFEANQKA 215 Query: 227 IDENEKSMLEAIRNIA 242 + +++ +A+ + Sbjct: 216 LSSTNQTLQKAVNELG 231 >gi|315649859|ref|ZP_07902942.1| fagellar hook-basal body protein [Paenibacillus vortex V453] gi|315274833|gb|EFU38214.1| fagellar hook-basal body protein [Paenibacillus vortex V453] Length = 281 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 47/279 (16%), Positives = 100/279 (35%), Gaps = 49/279 (17%) Query: 13 LALEQRLSTVADNMSNTDTVGFRT---IKVKFSEVVGAIKND---------IDQKISFVA 60 + EQR +TV N++N +T G++ ++ F EV+ ++ + + + V Sbjct: 1 MTQEQRHNTVTQNIANVNTAGYKATNSVQRSFPEVLVSMIGGNDSSNAGRKLGKFNTGVY 60 Query: 61 SGKEYLSKEVGSFISTGTELDFAL---------------------------------EGD 87 + + G+ TG DFAL Sbjct: 61 AEESISLYTEGALRETGKNTDFALVSSFTVQNPATGQDYPFDASGRYVDENGEVIYRPEG 120 Query: 88 AWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGE 147 + + TR+G F+V+ +G+L+S SG + + I + + Sbjct: 121 FFTVQDENGDTRYTRNGSFRVSPEGNLLSESGYQVLDNNNRPIILTGSASDFTVNEQGEI 180 Query: 148 ISQKGKVIATM-GLYSVDMSQGFVRRENSGIS---PNIPPTPLEDLSGVTVKRGFLEDSN 203 + G + G+ V G +R N P+ + V++GF+E SN Sbjct: 181 MDAAGNGTGIILGVSIVSQPHGLIREGNGVFRMSDPDGEVRFMTPADNGVVRQGFIEGSN 240 Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 + M ++ + + + ++ ++++ +A+ I Sbjct: 241 VDPTQSMVELTAALRAYETNQKIVQYYDRTLEKAVNEIG 279 >gi|192360677|ref|YP_001982399.1| flagellar basal-body rod protein FlgF [Cellvibrio japonicus Ueda107] gi|190686842|gb|ACE84520.1| flagellar basal-body rod protein FlgF [Cellvibrio japonicus Ueda107] Length = 295 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 45/236 (19%), Positives = 95/236 (40%), Gaps = 5/236 (2%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + I + + A+N++N +T GFR + S +G D ++ + Sbjct: 50 DRALFIAMTGAKHNMLAQTNRANNLANLNTTGFRADF-EQSRSMGVYYGDGQPTRAYALT 108 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGK 120 G I+TG ELD A++G + A+++P TR G + G L +A+G Sbjct: 109 ESPSSDFTAGPMITTGNELDVAIQGTGFIAIQAPDGTEAYTRAGNMTIDAAGMLRTANGL 168 Query: 121 YPVLDMASVPIQIPQKDEIF---NVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177 + + I ++ + + G ++ + V+ + + + G+ Sbjct: 169 PVMGAAGPINIPENERVAVGADGTISMVGLGQGPEAMVEVARIKLVNPDVKNLEKGDDGL 228 Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 + VT++ G LE SN N++ E Q++ L +++ ++ E++ Sbjct: 229 FRQRDGLNAQPAVDVTLRAGMLEASNVNAVTEFTQIMSLARQYEMQVKVMKAAEEN 284 >gi|117928057|ref|YP_872608.1| hypothetical protein Acel_0849 [Acidothermus cellulolyticus 11B] gi|117648520|gb|ABK52622.1| protein of unknown function DUF1078 domain protein [Acidothermus cellulolyticus 11B] Length = 398 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 45/215 (20%), Positives = 78/215 (36%), Gaps = 23/215 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ A + L V +N++N +TVGF+ +V+F + + + Sbjct: 1 MLRSLFSGVSGLRAHQTMLDVVGNNIANVNTVGFKASQVEFEDTLSQMLRAAGAPQGVQG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 Q V + G +TG + D ++GD +F L+ + TR+G F Sbjct: 61 GTNPAQVGLGVQIAAISTTFTQGPAETTGVDTDLMIQGDGFFVLDDGGQRVYTRNGAFSF 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 +G+LVSA+G +AS + V G ++ + T S + Sbjct: 121 DANGNLVSANGALVQGWLASGGV----------VNTTGPVTAIKLPLGTSMPPSATTTAT 170 Query: 169 FV-RRENSGISPNIPPTPLEDLSGVTVKRGFLEDS 202 G I + + LE S Sbjct: 171 LAGNLPADGSGSPIDNNLTVYDAKGQATQYTLEYS 205 Score = 76.1 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 14/94 (14%), Positives = 37/94 (39%), Gaps = 5/94 (5%) Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNAN 205 + +A + L + + G + S + ++ + + T + G LE SN + Sbjct: 302 MKQPLAKIALATFNNPGGLTKVGTSEYAESVNSGAAQIGASGTGSRGQLAAGELEGSNVD 361 Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E +I + F + +I +++ + + + Sbjct: 362 LSQEFTNLIIAERGFQANAKVITTSDQVLQDLVN 395 >gi|4580018|gb|AAD24206.1|AF049342_4 flagellar hook protein FlgE [Treponema denticola ATCC 33520] Length = 237 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 27/139 (19%), Positives = 55/139 (39%), Gaps = 12/139 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S G+ + R+ + +N++N +T GF+ +V F +++ + + Sbjct: 1 MMRSLFSGVTGMQNHQTRMDVIGNNVANVNTTGFKRGRVNFQDLISQQLSGAARPTEELG 60 Query: 56 -------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 + G+ +TG D A++G+ +F L+ TR G F + Sbjct: 61 GVNPKEVGLGMMVASIDTIFTQGALQTTGVNTDLAIQGNGFFILKDGEKTFYTRAGAFGI 120 Query: 109 TDDGSLVSASGKYPVLDMA 127 +G+LV+ + V Sbjct: 121 DKEGTLVNPANGMRVQGWM 139 >gi|28952051|ref|NP_240160.2| flagellar basal body rod protein FlgF [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219681700|ref|YP_002468086.1| flagellar basal-body rod protein FlgF [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|219682255|ref|YP_002468639.1| flagellar basal-body rod protein FlgF [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|257471396|ref|ZP_05635395.1| flagellar basal-body rod protein FlgF [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|219621988|gb|ACL30144.1| flagellar basal-body rod protein FlgF [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219624543|gb|ACL30698.1| flagellar basal-body rod protein FlgF [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|311086650|gb|ADP66731.1| flagellar basal body rod protein FlgF [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] gi|311087236|gb|ADP67316.1| flagellar basal body rod protein FlgF [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] gi|311087755|gb|ADP67834.1| flagellar basal body rod protein FlgF [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 252 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 44/252 (17%), Positives = 90/252 (35%), Gaps = 16/252 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M+ S + A L ++ S +++N++N T GF+ K F+ N + S Sbjct: 1 MENSIYKSMIAANQLLEKQSIISNNLANISTTGFK-EKFIFA---IQNHNVKNLYNSDKK 56 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASG 119 KEY + G TG LD ++ D W ++ T++G K+ L Sbjct: 57 ITKEYYNLSPGILRYTGRNLDLFIKDDGWLTVKDTNGQEAYTKNGHLKINSKRKLTIQDN 116 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT----------MGLYSVDMSQGF 169 + + + + + N ++ ++ T + G Sbjct: 117 EVIGNNCNIIIPKNIILKILSNGVITSVKNKHKHIVETKIGSLKLVQLPSQDLIQNENGL 176 Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 + + ++ + V+ G LE+SN N+ M +MI ++F +I Sbjct: 177 FYLKKNNEINKKHTNTIKHSKKIRVQSGMLEESNVNASKNMIEMISNARQFEMQMKMISM 236 Query: 230 NEKSMLEAIRNI 241 +++ A + Sbjct: 237 CDQNAEYA-NQL 247 >gi|149191154|ref|ZP_01869412.1| putative flagellar basal-body rod protein [Vibrio shilonii AK1] gi|148834992|gb|EDL51971.1| putative flagellar basal-body rod protein [Vibrio shilonii AK1] Length = 244 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 39/238 (16%), Positives = 78/238 (32%), Gaps = 5/238 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M A+N+S+ DT+GF+ + ++ Sbjct: 1 MNPILFSAAKGAERTMLAQHVRANNLSHADTIGFKALME--HSSPMRLEGSGFLTSVTSR 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFAL---ESPRGIILTRDGRFKVTDDGSLVSA 117 + + G I T LD ++ GD + L + + TR G F++ +G L Sbjct: 59 TNSSINNFAQGEDIRTERPLDVSINGDGFITLEGLDGEPNELYTRAGNFRLDGNGQLYLG 118 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177 + ++ + N + L V + SG Sbjct: 119 ERRVMSIEGPMILPDFEFITVSANGLISVTPIGGEASVEVGALKLVKPEYDEMTMHASGH 178 Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 L + V V+ G+LE SN +S+ E+ ++ LT+++ ++ ++ Sbjct: 179 FVPKGGGVLAEDFTVQVRSGYLEASNVSSLEELVSIMSLTRQYEMQIEVMASADEIAQ 236 >gi|326389474|ref|ZP_08211041.1| fagellar hook-basal body protein [Thermoanaerobacter ethanolicus JW 200] gi|325994479|gb|EGD52904.1| fagellar hook-basal body protein [Thermoanaerobacter ethanolicus JW 200] Length = 417 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 60/170 (35%), Gaps = 12/170 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S ++ A + R+ + +N++N +TVG++ ++ F E+ Sbjct: 1 MLRSMYSAVSGLKAHQARMDVIGNNIANVNTVGYKASRMTFKEIFSQTIKGASAPQGNGG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 + Q VA G T D +++G+ +F + + + TR G F Sbjct: 61 GTNPQQIGLGVAIASIDTLFTRGGAQRTDNPTDLSIDGNGFFIVSNGGANLYTRAGNFSF 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158 +G LV+ G + M++ + S V T Sbjct: 121 DSNGDLVTPDGYKVLGWMSTDGKTVNTDTGNLVPISLKNWSSIDPVATTQ 170 Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 33/92 (35%), Gaps = 5/92 (5%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSM 207 ++I + + G + N+ + + T + G LE SN + Sbjct: 323 QIIGQIAIADFQNPMGLEKIGNTMFINTVNSGEPMIGAAGTGTRGSINPGTLEMSNVDLS 382 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E MI + F + +I +++ + + + Sbjct: 383 NEFADMIVTQRGFQANAKVITVSDEILQDLVN 414 >gi|323341368|ref|ZP_08081612.1| flagellar distal rod protein [Lactobacillus ruminis ATCC 25644] gi|323091245|gb|EFZ33873.1| flagellar distal rod protein [Lactobacillus ruminis ATCC 25644] Length = 234 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 45/256 (17%), Positives = 94/256 (36%), Gaps = 38/256 (14%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK----------- 49 M S + + L++R ++ N++N +T G+ K F + ++ Sbjct: 1 MIRSIDTLKSNFEVLQKRQEAISANIANVNTNGY-QEKKLFQSTLKNVQLHNFMGGLKNE 59 Query: 50 --NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 ++ YL+ + GS T + DFA+ G +F + I TR+G F Sbjct: 60 QRVNVGNFTFGNQIDGSYLNTQSGSMHETDLKTDFAINGAGYFTVRMNNGQIGYTRNGNF 119 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 G LV+ G + G+ Q + + S + + Sbjct: 120 TENRQGQLVTQEGYAVLG-------------------ANGQAIQANEANPNFMIVSFNNA 160 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 + N+ + N T + V +G LE SN ++ M +I +++F + + Sbjct: 161 SALQNQGNTIYTSNTAGTQI----RSEVVQGMLEGSNTDTAQNMVDLIQTSREFEANQKV 216 Query: 227 IDENEKSMLEAIRNIA 242 + +++ +A+ + Sbjct: 217 LSTANQTLSKAVNELG 232 >gi|254516990|ref|ZP_05129048.1| flagellar basal-body rod protein FlgF [gamma proteobacterium NOR5-3] gi|219674495|gb|EED30863.1| flagellar basal-body rod protein FlgF [gamma proteobacterium NOR5-3] Length = 249 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 53/239 (22%), Positives = 94/239 (39%), Gaps = 8/239 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M I A + A N++N T GF+ V+ V ++ + ++ Sbjct: 1 MDHFVYIAAAGAKESMLAQAANAHNLANASTTGFKADLVEAETVY--LRGAGTETRAYNV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALES---PRGIILTRDGRFKVTDDGSLVSA 117 + + G TG +LD A+ G WFA++S G +TR G F++ + G LV+ Sbjct: 59 IRDTGVDFDEGVLNQTGRDLDLAINGQGWFAVQSLDGNGGEGVTRRGDFRIDELGQLVNG 118 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDMSQGFVRREN 174 +G+ + + + + I + G + A L V+ + + Sbjct: 119 AGEALLGNDGPIALPPFSSLSIGSDGTVSIVPLGELPNAQAVLDRIKLVNPPTENLTKGE 178 Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 G+ P+E V + G LE SN N + M +MI L+++F L+ E Sbjct: 179 YGLLTTNGGLPMEADGNVKMVSGALESSNVNPVTAMVRMIELSRQFEHYVKLMKVAEDV 237 >gi|218677554|ref|ZP_03525451.1| flagellar basal body rod protein FlgG [Rhizobium etli CIAT 894] Length = 205 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 34/203 (16%), Positives = 68/203 (33%), Gaps = 7/203 (3%) Query: 46 GAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDG 104 A+ + V + G TG +LD AL G +F ++ + + TR G Sbjct: 2 QAVVPEGANIGLGVQTSAVRNLHLQGELTQTGNDLDVALIGKGFFQIQSTDGTTLYTRAG 61 Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSV 163 F D G LV+ G + + V K + + + L Sbjct: 62 AFNKNDQGQLVTVDGYEVLPGITIPTGSTELTISRSGEVSAKLPGATSATTLGQLTLADF 121 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQ 218 G ++ + +K+G+LE SN + + E+ ++I + Sbjct: 122 VNEAGLQPIGDNLFQETAASGDAVVGNPDEEGFAYMKQGYLESSNVDPVKEITELISAQR 181 Query: 219 KFNSITTLIDENEKSMLEAIRNI 241 + + +I ++ +N+ Sbjct: 182 AYEMNSKVITTADEMASIVSKNL 204 >gi|254438850|ref|ZP_05052344.1| conserved domain protein [Octadecabacter antarcticus 307] gi|198254296|gb|EDY78610.1| conserved domain protein [Octadecabacter antarcticus 307] Length = 255 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 43/255 (16%), Positives = 85/255 (33%), Gaps = 31/255 (12%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK---ISFVASGKEYLSKEVGS 72 +S V++N++N T FR FS++ A + + S E GS Sbjct: 1 MFEISVVSNNVANAGTTAFRKSTANFSDLYTAASAESASRLSLGVGSVVETTRQSGEQGS 60 Query: 73 FISTGTELDFALEGDAWF-------ALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125 + L+ AL G+ F + + + TRDG F + +G L +++ + + Sbjct: 61 LMERDGVLNLALIGNGMFVSAASAGDAQPSQLLTFTRDGEFALDKNGVLRTSTNDFVLGY 120 Query: 126 MASVPIQIPQKDEIFNV----------------GEKGEISQKGKVIATMGLYSVDMSQGF 169 ++ Q + F S++ ++ + + + Sbjct: 121 DGLGGTELGQLEVPFQSVNGSTLTALEINASGVMRGTYGSEEPVILGQIAIGAFPNVTAL 180 Query: 170 VRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224 + L V+ G LE SN N E+ MI Q+F+ + Sbjct: 181 RQLGMGRFQATEEAGGLMLGVSGQDGFGKVQTGALESSNVNLTTELTSMIQAQQQFSGSS 240 Query: 225 TLIDENEKSMLEAIR 239 ++ + + R Sbjct: 241 RILQAYSDMIEKLTR 255 >gi|167040321|ref|YP_001663306.1| hypothetical protein Teth514_1684 [Thermoanaerobacter sp. X514] gi|300914405|ref|ZP_07131721.1| fagellar hook-basal body protein [Thermoanaerobacter sp. X561] gi|307724359|ref|YP_003904110.1| fagellar hook-basal body protein [Thermoanaerobacter sp. X513] gi|166854561|gb|ABY92970.1| protein of unknown function DUF1078 domain protein [Thermoanaerobacter sp. X514] gi|300889340|gb|EFK84486.1| fagellar hook-basal body protein [Thermoanaerobacter sp. X561] gi|307581420|gb|ADN54819.1| fagellar hook-basal body protein [Thermoanaerobacter sp. X513] Length = 417 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 30/170 (17%), Positives = 57/170 (33%), Gaps = 12/170 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S ++ A + R+ + +N++N +TVG++ ++ F E+ Sbjct: 1 MLRSMYSAVSGLKAHQARMDVIGNNIANVNTVGYKASRMTFKEIFSQTIKGASAPQGNGG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 + Q VA G T D +++G+ +F + + TR G F Sbjct: 61 GTNPQQIGLGVAIASIDTLFTRGGAQRTDNPTDLSIDGNGFFIVSKGGANLYTRAGNFSF 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158 G LV+ G + M++ + S T Sbjct: 121 DSQGDLVTPDGYKVLGWMSTDGKTVNTDTGNLVPISLKNWSSIDPAATTQ 170 Score = 80.3 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 33/92 (35%), Gaps = 5/92 (5%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSM 207 +VI + + G + N+ + + T + G LE SN + Sbjct: 323 QVIGQIAIADFQNPMGLEKVGNTMFINTVNSGEPMIGAAGTDTRGSINPGTLEMSNVDLA 382 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E MI + F + +I +++ + + + Sbjct: 383 NEFTDMIVTQRGFQANARVITASDEILQDLVN 414 >gi|325567513|ref|ZP_08144180.1| flagellar basal-body rod protein [Enterococcus casseliflavus ATCC 12755] gi|325158946|gb|EGC71092.1| flagellar basal-body rod protein [Enterococcus casseliflavus ATCC 12755] Length = 233 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 40/256 (15%), Positives = 87/256 (33%), Gaps = 39/256 (15%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV-------------GA 47 M ++ L++R T + N++N +T G++ K F + Sbjct: 1 MIRGLDVLSRNISLLQKRQETTSCNIANVNTTGYQA-KTLFQSALDEVALHNYQSGPNAD 59 Query: 48 IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 + DI +S++ G+ TG DFAL + +F +++ G TR+G F Sbjct: 60 TRRDIGGLSLGTQLAGSTISQDQGAVKQTGQASDFALLSEGYFVVQNNAGQRLYTRNGDF 119 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 V V+ G + + + Sbjct: 120 TVNQQNQYVTQEGYLVLGANGQAVSALGPANFQIQTFP---------------------P 158 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 + + ++ N ++ +++G LE +N EM MI +++F + Sbjct: 159 EALTTAGQNYVTSNAAG---TTVNAPVIQQGALEQANVAVADEMVAMIQTSREFEANQKA 215 Query: 227 IDENEKSMLEAIRNIA 242 + +++ +A+ + Sbjct: 216 LSSTNQTLQKAVNELG 231 >gi|307264876|ref|ZP_07546438.1| fagellar hook-basal body protein [Thermoanaerobacter wiegelii Rt8.B1] gi|306920134|gb|EFN50346.1| fagellar hook-basal body protein [Thermoanaerobacter wiegelii Rt8.B1] Length = 417 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 60/170 (35%), Gaps = 12/170 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S ++ A + R+ + +N++N +TVG++ ++ F E+ Sbjct: 1 MLRSMYSAVSGLKAHQARMDVIGNNIANVNTVGYKASRMTFKEIFSQTIKGASAPQGNGG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 + Q VA G T D +++G+ +F + + + TR G F Sbjct: 61 GTNPQQIGLGVAIASIDTLFTRGGAQRTDNPTDLSIDGNGFFIVSNGGANLYTRAGNFSF 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158 +G LV+ G + M++ + S V T Sbjct: 121 DSNGDLVTPDGYKVLGWMSTDGKTVNTDTGNLVPISLKNWSSIDPVATTQ 170 Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 33/92 (35%), Gaps = 5/92 (5%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSM 207 ++I + + G + N+ + + T + G LE SN + Sbjct: 323 QIIGQIAIADFQNPMGLEKIGNTMFINTVNSGEPMIGAAGTGTRGSINPGTLEMSNVDLS 382 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E MI + F + +I +++ + + + Sbjct: 383 NEFADMIVTQRGFQANAKVITVSDEILQDLVN 414 >gi|114777904|ref|ZP_01452818.1| hypothetical protein SPV1_05764 [Mariprofundus ferrooxydans PV-1] gi|114551691|gb|EAU54243.1| hypothetical protein SPV1_05764 [Mariprofundus ferrooxydans PV-1] Length = 247 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 53/248 (21%), Positives = 113/248 (45%), Gaps = 11/248 (4%) Query: 1 MQTSFNI-GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID----QK 55 M + I G+A Q+A + +L +A N++N ++VG+ + FS + + Sbjct: 1 MNLGYYISGVAGQMA-QNKLDGIAHNLANVNSVGYMEDRTSFSSMFSGKMSREGVPSKTS 59 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSL 114 +++ + +Y+S + G+ T +LDF++ GD +F ++ LTR G FK+ +G+L Sbjct: 60 AAYLTASTQYVSTQAGNIRQTNNDLDFSVHGDGYFRIQMKDGTEALTRAGNFKLDAEGNL 119 Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174 ++ SG + I + + G + G+ +A +G+ + S+ + Sbjct: 120 LNQSGLAVLDKNGGP---IQLPVGKISATDNGSLYVNGQPVAELGISMIKDSRQIQKVAG 176 Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 I + S +V +G LED+N NS+ M Q++ + + S+ + ++ + Sbjct: 177 VLIRTGQDNIQPANGSI-SVHQGELEDANVNSVLAMTQIVDTMRNYQSMMKVAEQYNQLS 235 Query: 235 LEAIRNIA 242 + + Sbjct: 236 SQLSDRVG 243 >gi|329849713|ref|ZP_08264559.1| flagellar basal-body rod protein FlgF [Asticcacaulis biprosthecum C19] gi|328841624|gb|EGF91194.1| flagellar basal-body rod protein FlgF [Asticcacaulis biprosthecum C19] Length = 249 Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats. Identities = 54/247 (21%), Positives = 106/247 (42%), Gaps = 6/247 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID--QKISF 58 M + I L+ QL L + L A+NM+N +T G++ ++ + GA + +F Sbjct: 1 MDNASYIALSRQLTLRRELDISANNMANMNTNGYKFEQLLVHQEYGAPAYNAPIRTPANF 60 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGD-AWFALESPRGIILTRDGRFKVTDDGSLVSA 117 + G+F TG LDFA++GD +F +++ G TRDG F + +G L++ Sbjct: 61 AYDNEVGRDFSQGTFQITGAPLDFAIDGDGVFFTVQTADGEAYTRDGAFTMNAEGMLMTQ 120 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV--IATMGLYSVDMSQGFVRRENS 175 G V D + + + + +G+ + + L + ++ + Sbjct: 121 DGYPVVGDGGPITMDPKKGQPAVSEDGIITQDYQGQAERVGKLNLVRITDMSDL-KKAGN 179 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 G + V++GFLE SN N M E+ ++I + + + ++ +I + Sbjct: 180 GTYTLTSNATPVPATDARVRQGFLEASNVNPMIEVTKLIEINRAYTTLAGIIQQQHDLNK 239 Query: 236 EAIRNIA 242 A+ + Sbjct: 240 SAVERLG 246 >gi|161485722|ref|NP_660672.3| flagellar basal body rod protein FlgF [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|25008455|sp|Q8K9K5|FLGF_BUCAP RecName: Full=Flagellar basal-body rod protein flgF gi|21623236|gb|AAM67883.1| flagellar basal-body rod protein FlgF [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 249 Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats. Identities = 46/249 (18%), Positives = 94/249 (37%), Gaps = 13/249 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + L + + +A+N++N TVGF+ F +N + K ++ Sbjct: 1 MNKAIYESMNAAIKLLDKQAVIANNLANISTVGFKESFNLF----IKDRNLQNLKKTYNQ 56 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSAS- 118 + KEY + G+ I T LD ++ + W A++ T++G K+ +G + + Sbjct: 57 NVKEYYNFYPGTLIHTQRNLDLVIKNNGWLAIKDINGQEAYTKNGHIKINKEGKMTVQNY 116 Query: 119 ---GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 G + + + + I +K + S I ++ L + + Sbjct: 117 ELIGNNGNIKIPNNVNLKISSNGIIKEIKKNKDSIIESTIGSLKLVRLQNDNLIQKENGL 176 Query: 176 GISPNIPPTPLE---DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 + S V ++ LE SN N M MI ++F +I ++ Sbjct: 177 FYLKKDNLNKYKNILHDSSVRIQSEMLEASNVNPTKNMIDMISNARQFEMNMKIISMCDQ 236 Query: 233 SMLEAIRNI 241 + A + Sbjct: 237 NTEYA-NQL 244 >gi|167037660|ref|YP_001665238.1| hypothetical protein Teth39_1248 [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320116075|ref|YP_004186234.1| flagellar hook-basal body protein [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166856494|gb|ABY94902.1| protein of unknown function DUF1078 domain protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319929166|gb|ADV79851.1| flagellar hook-basal body protein [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 417 Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats. Identities = 30/170 (17%), Positives = 57/170 (33%), Gaps = 12/170 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S ++ A + R+ + +N++N +TVG++ ++ F E+ Sbjct: 1 MLRSMYSAVSGLKAHQARMDVIGNNIANVNTVGYKASRMTFKEIFSQTIKGASAPQGNGG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 + Q VA G T D +++G+ +F + + TR G F Sbjct: 61 GTNPQQIGLGVAIASIDTLFTRGGAQRTDNPTDLSIDGNGFFIVSKGGANLYTRAGNFSF 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158 G LV+ G + M++ + S T Sbjct: 121 DSQGDLVTPDGYKVLGWMSTDGKTVNTDTGNLVPISLKNWSSIDPAATTQ 170 Score = 79.9 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 33/92 (35%), Gaps = 5/92 (5%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSM 207 +VI + + G + N+ + + T + G LE SN + Sbjct: 323 QVIGQIAIADFQNPMGLEKVGNTMFINTVNSGEPMIGAAGTDTRGSINPGTLEMSNVDLA 382 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E MI + F + +I +++ + + + Sbjct: 383 NEFTDMIVTQRGFQANARVITASDEILQDLVN 414 >gi|42528268|ref|NP_973366.1| flagellar hook protein FlgE [Treponema denticola ATCC 35405] gi|4426943|gb|AAD20617.1| flagellar hook protein FlgE [Treponema denticola] gi|41819538|gb|AAS13285.1| flagellar hook protein FlgE [Treponema denticola ATCC 35405] Length = 463 Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats. Identities = 27/139 (19%), Positives = 55/139 (39%), Gaps = 12/139 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S G+ + R+ + +N++N +T GF+ +V F +++ + + Sbjct: 1 MMRSLFSGVTGMQNHQTRMDVIGNNVANVNTTGFKRGRVNFQDLISQQLSGAARPTEELG 60 Query: 56 -------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 + G+ +TG D A++G+ +F L+ TR G F + Sbjct: 61 GVNPKEVGLGMMVASIDTIFTQGALQTTGVNTDLAIQGNGFFILKDGEKTFYTRAGAFGI 120 Query: 109 TDDGSLVSASGKYPVLDMA 127 +G+LV+ + V Sbjct: 121 DKEGTLVNPANGMRVQGWM 139 Score = 68.7 bits (166), Expect = 6e-10, Method: Composition-based stats. Identities = 13/92 (14%), Positives = 30/92 (32%), Gaps = 5/92 (5%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGF-----LEDSNANSM 207 + I + + G + + + + TV +G+ LE SN + Sbjct: 369 QEIGQIAMAGFANQGGLEKAGQNTYVQSNNSGIANVSTSGTVGKGYFIGGTLEMSNVDLT 428 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + MI + F + I ++ + + Sbjct: 429 DQFVDMIVTQKGFQAGAKTIQTSDTMLETVLN 460 >gi|68164563|gb|AAY87292.1| predicted flagellar basal-body rod protein [uncultured bacterium BAC17H8] Length = 259 Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats. Identities = 44/258 (17%), Positives = 83/258 (32%), Gaps = 23/258 (8%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN--DIDQKISFVAS 61 + A +S +++N++N+ + GF+ F ++ V Sbjct: 1 MISTIRNALKMATTDISIISNNIANSGSTGFKRSDGNFLHSYAEEIPIPGLNVGFGVVHE 60 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG--IILTRDGRFKVTDDGSLVSASG 119 + GS T LD A+ G F P + +RDG F + G+LV+ Sbjct: 61 EPRRQDHKQGSLRVTNNSLDLAINGGGMFVALKPDDGEVTFSRDGSFLIDFVGNLVTTDN 120 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV--------------IATMGLYSVDM 165 + V + P K + ++ + T+ L Sbjct: 121 RRVVGANGEQIVIPPSKLDAAGNETLLDVIKISNTGKIQLTYGDGEMVDAGTLALAHFAN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 S G S P + + +G LE SN N E+ +++ Q F Sbjct: 181 SGGLKPVGGSYFKATEKSGPAILGSPTQQNFGEIVQGHLEMSNTNVANELTKLMVSQQAF 240 Query: 221 NSITTLIDENEKSMLEAI 238 ++ + L+ +S + Sbjct: 241 SASSRLMQSAIESEKRLL 258 >gi|325474542|gb|EGC77728.1| flagellar hook protein FlgE [Treponema denticola F0402] Length = 463 Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats. Identities = 27/139 (19%), Positives = 55/139 (39%), Gaps = 12/139 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S G+ + R+ + +N++N +T GF+ +V F +++ + + Sbjct: 1 MMRSLFSGVTGMQNHQTRMDVIGNNVANVNTTGFKRGRVNFQDLISQQLSGAARPTEELG 60 Query: 56 -------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 + G+ +TG D A++G+ +F L+ TR G F + Sbjct: 61 GVNPKEVGLGMMVASIDTIFTQGALQTTGVNTDLAIQGNGFFILKDGEKTFYTRAGAFGI 120 Query: 109 TDDGSLVSASGKYPVLDMA 127 +G+LV+ + V Sbjct: 121 DKEGTLVNPANGMRVQGWM 139 Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats. Identities = 13/92 (14%), Positives = 30/92 (32%), Gaps = 5/92 (5%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGF-----LEDSNANSM 207 + I + + G + + + + TV +G+ LE SN + Sbjct: 369 QEIGQIAMAGFANQGGLEKAGQNTYVQSNNSGIANVSTSGTVGKGYFIGGTLEMSNVDLT 428 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + MI + F + I ++ + + Sbjct: 429 DQFVDMIVTQKGFQAGAKTIQTSDTMLETVLN 460 >gi|256750749|ref|ZP_05491634.1| protein of unknown function DUF1078 domain protein [Thermoanaerobacter ethanolicus CCSD1] gi|256750332|gb|EEU63351.1| protein of unknown function DUF1078 domain protein [Thermoanaerobacter ethanolicus CCSD1] Length = 417 Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats. Identities = 30/170 (17%), Positives = 57/170 (33%), Gaps = 12/170 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S ++ A + R+ + +N++N +TVG++ ++ F E+ Sbjct: 1 MLRSMYSAVSGLKAHQARMDVIGNNIANVNTVGYKASRMTFKEIFSQTIKGASAPQGNGG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 + Q VA G T D +++G+ +F + + TR G F Sbjct: 61 GTNPQQIGLGVAIASIDTLFTRGGAQRTDNPTDLSIDGNGFFIVSKGGANLYTRAGNFSF 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158 G LV+ G + M++ + S T Sbjct: 121 DSQGDLVTPDGYKVLGWMSTDGKTVNTDTGNLVPISLKNWSSIDPAATTQ 170 Score = 79.5 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 33/92 (35%), Gaps = 5/92 (5%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSM 207 +VI + + G + N+ + + T + G LE SN + Sbjct: 323 QVIGQIAIADFQNPMGLEKVGNTMFINTVNSGEPMIGAAGTNTRGSINPGTLEMSNVDLA 382 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E MI + F + +I +++ + + + Sbjct: 383 NEFTDMIVTQRGFQANARVITASDEILQDLVN 414 >gi|56965597|ref|YP_177331.1| flagellar basal-body rod protein [Bacillus clausii KSM-K16] gi|56911843|dbj|BAD66370.1| flagellar basal-body rod protein [Bacillus clausii KSM-K16] Length = 262 Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats. Identities = 47/258 (18%), Positives = 93/258 (36%), Gaps = 22/258 (8%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK---------- 55 + A L+ ++ T+++NM+N +T GF+ F++V+ + + + Sbjct: 5 HTAAATLSQLQAKIDTISNNMANAETTGFKRRSASFADVLTSEYLNQPNENRQTPHGLRV 64 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEG-DAWFALESPRGIILTRDGRFKVTDDG-- 112 + + + E G+ TG ELDFAL D ++ +E+ G LTRDG F + Sbjct: 65 GTGAKLAQTQIQLEQGTLRETGRELDFALTEADLFYNIETVAGTRLTRDGTFYFSPQAVG 124 Query: 113 ---SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG---KVIATMGLYSVDMS 166 LV++ G + + + + + + + L V Sbjct: 125 NGLELVTSDGNRVLDSDGEAIVMPGDTVSLEWRDGNLFAQLRNGGEQQVGSFALTRVLRP 184 Query: 167 QGFVRRENSGISPNIPPTPLED--LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224 Q N+ P E+ + +K+ LE +N + EM +++ + Sbjct: 185 QTLESGGNNLYVLPELPGVSEEVVAADEHMKQNMLEQANVDLGLEMAELMETQRLLQFQA 244 Query: 225 TLIDENEKSMLEAIRNIA 242 + NI Sbjct: 245 RAYSFADDMAG-LANNIR 261 >gi|307718606|ref|YP_003874138.1| flagellar hook protein [Spirochaeta thermophila DSM 6192] gi|306532331|gb|ADN01865.1| flagellar hook protein [Spirochaeta thermophila DSM 6192] Length = 462 Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats. Identities = 30/139 (21%), Positives = 55/139 (39%), Gaps = 12/139 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ + R+ + +N+SN +T GF+ +V F +++ + Sbjct: 1 MMRSLYAGVSGLQNHQIRMDVIGNNISNVNTTGFKKGRVNFHDMISQTLSGAARPTEEVG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 Q + GS +TG D A++G+ +F L TR G F + Sbjct: 61 GVNPKQVGLGMTIASIDTIHTQGSLQTTGVMTDVAIQGEGFFILRKGDRSFYTRAGVFGL 120 Query: 109 TDDGSLVSASGKYPVLDMA 127 ++G LV+ + V Sbjct: 121 DEEGYLVNPANGLRVQGWR 139 Score = 82.6 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 13/98 (13%), Positives = 32/98 (32%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLED 201 + + + + L + G + + ++ P + G LE Sbjct: 362 YSNGNNRPLGQIALATFVNPGGLEKEGETMFRVSLNSGDPNVGPPNFAGKGKLIAGALEM 421 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + MI + F + + I +++ + E + Sbjct: 422 SNVDLAEAFTDMIVTQRGFQANSRTITTSDQMLQELLT 459 >gi|292492364|ref|YP_003527803.1| flagellar basal-body rod protein FlgF [Nitrosococcus halophilus Nc4] gi|291580959|gb|ADE15416.1| flagellar basal-body rod protein FlgF [Nitrosococcus halophilus Nc4] Length = 246 Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats. Identities = 42/246 (17%), Positives = 97/246 (39%), Gaps = 6/246 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + Q + N++N +T GFR +F + + + + Sbjct: 1 MDRMLYVAMTGAQQMMQATAANNHNLANLNTTGFRADLSQFRSM--PVFGEGYPTRVYAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASG 119 + + + +G+ STG ELD A++G+ A++ TR G K++ +G L + +G Sbjct: 59 AERPGVDFTLGALQSTGRELDVAVQGEGLIAVQAFDGTEAYTRAGNLKISSNGILTTGAG 118 Query: 120 KYPVL---DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + + +A P + + + + + + + V+ +++ G Sbjct: 119 QPVLGEGGPVAVPPAETVEIGTDGTISIRPLGQEANTLAVLDRIKLVNPPLAQLKKGEDG 178 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + + V++ G LE SN N + M +MI L +++ ++ E Sbjct: 179 LLRLAEGAVAPAEASVSLASGMLEASNVNGVDAMVEMIALARQYEMQVKMMQAAEDLDAS 238 Query: 237 AIRNIA 242 + + + Sbjct: 239 SAQMLR 244 >gi|257876009|ref|ZP_05655662.1| flagellar hook-basal body complex protein [Enterococcus casseliflavus EC20] gi|257810175|gb|EEV38995.1| flagellar hook-basal body complex protein [Enterococcus casseliflavus EC20] Length = 233 Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats. Identities = 40/256 (15%), Positives = 88/256 (34%), Gaps = 39/256 (15%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV-------------GA 47 M ++ L++R T + N++N +T G++ K F + Sbjct: 1 MIRGLDVLSRNISLLQKRQETTSGNIANVNTTGYQA-KTLFQSALDEVALHNYQSGPNAD 59 Query: 48 IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 + DI +S++ G+ TG DFAL + +F +++ G TR+G F Sbjct: 60 TRRDIGGLSLGTQLAGSTISQDQGAVKQTGQASDFALLSEGYFVVQNNAGQRLYTRNGDF 119 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 V V+ G + + + Sbjct: 120 TVNQQNQYVTQEGYLVLGANGQAVSALGSANFQIQTFP---------------------P 158 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 + + ++ N+ ++ +++G LE +N EM MI +++F + Sbjct: 159 EALTTAGQNYVTSNVAG---TTVNAPVIQQGALEQANVAVADEMVAMIQTSREFEANQKA 215 Query: 227 IDENEKSMLEAIRNIA 242 + +++ +A+ + Sbjct: 216 LSSTNQTLQKAVNELG 231 >gi|42524754|ref|NP_970134.1| hypothetical protein Bd3395 [Bdellovibrio bacteriovorus HD100] gi|39576964|emb|CAE78193.1| flgE [Bdellovibrio bacteriovorus HD100] Length = 427 Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats. Identities = 32/146 (21%), Positives = 57/146 (39%), Gaps = 3/146 (2%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---DIDQKISF 58 +S G++ A + L + DN++N +T+GF+ + +F +++ +Q Sbjct: 4 LSSLYTGVSGMTAQGEALGVIGDNIANANTIGFKASRAEFQDIISKNLKGIVGGNQIGRG 63 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSAS 118 V G G+ +T D A+ GD +F ++ G TRDG F +G LV+ Sbjct: 64 VKIGAVNPILSQGNIDATEKVTDLAISGDGYFKVKGSDGESYTRDGSFHFDREGYLVTND 123 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGE 144 + I K Sbjct: 124 NQRVQGFSTDEKGNIVNKMTDIKFPR 149 Score = 72.6 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 30/98 (30%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSG-----ISPNIPPTPLEDLSGVTVKRGFLED 201 + + +A + L + + + N+ S + LE Sbjct: 327 YSNGQANDLAQIALAKFENPEALFKVGNNRLKESRDSGTASVGAPGAAGRGKLFAKSLER 386 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S + E MI + F + I ++ + E I+ Sbjct: 387 STVDLATEFVNMIQNQRGFQANAKTITTTDELLNEVIQ 424 >gi|304438499|ref|ZP_07398439.1| flagellar basal body and hook protein [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304368582|gb|EFM22267.1| flagellar basal body and hook protein [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 711 Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats. Identities = 30/139 (21%), Positives = 51/139 (36%), Gaps = 12/139 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ + R+ V N++N +TVG++ +V F++ + + Sbjct: 1 MMRSMFSGVSGLKGHQTRMDVVGHNIANVNTVGYKASRVTFADTLYQTSSGASAPTGNLG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 Q + S TG D AL G+ F +++ G TRDG F+ Sbjct: 61 GINPKQIGLGMNVASIDTIFGDASAQGTGKNTDVALSGNGLFIVKNGSGTYYTRDGAFEF 120 Query: 109 TDDGSLVSASGKYPVLDMA 127 G+ V V Sbjct: 121 DAQGNYVLPGNGSFVQGWM 139 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 14/88 (15%), Positives = 29/88 (32%), Gaps = 4/88 (4%) Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV----TVKRGFLEDSNANSMYEMG 211 A + + + G R + + + T+ LE SN + + Sbjct: 621 AQLAIAQFNNPSGLTRAGGNFFQQSNNSGAANVKTASDLGCTITPSALEMSNVDLADQFS 680 Query: 212 QMIHLTQKFNSITTLIDENEKSMLEAIR 239 MI + F S + +I ++ + I Sbjct: 681 DMIVTQRGFQSNSKIITVADEMLETLIS 708 >gi|257457611|ref|ZP_05622778.1| flagellar hook protein FlgE [Treponema vincentii ATCC 35580] gi|257444997|gb|EEV20073.1| flagellar hook protein FlgE [Treponema vincentii ATCC 35580] Length = 463 Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats. Identities = 30/142 (21%), Positives = 58/142 (40%), Gaps = 12/142 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S G++ + R+ + +N++N +T GF+ +V F +++ + + Sbjct: 1 MMRSLFSGVSGMQNHQTRMDVIGNNIANVNTTGFKRGRVNFQDLISQQLSGASRPTEEVG 60 Query: 56 -------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 + G+ STG D A++G+ +F L+S TR G F V Sbjct: 61 GVNPKEVGLGMMVASIDTVHTQGALQSTGINTDIAVQGNGFFVLKSGEKSFYTRAGAFGV 120 Query: 109 TDDGSLVSASGKYPVLDMASVP 130 DG++V+ + V + Sbjct: 121 DRDGTMVNPANGMRVQGWMAQE 142 Score = 72.6 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 21/195 (10%), Positives = 52/195 (26%), Gaps = 5/195 (2%) Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109 ++ S + ++ + + A G+ + I L G + T Sbjct: 266 DNYGHLASVTDTAGNASAEAGQVLVQVSYNVPGATAGEDGAPVRHTFDINLGEIGTSRNT 325 Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169 ++ K D ++ K + + + I + + G Sbjct: 326 ITQFAERSTTKAYEQDGYAMGYLENFKIDQSGIITGVYSNGVSHEIGQLAMAGFANQGGL 385 Query: 170 VRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224 + + + + G LE SN + + MI + F + Sbjct: 386 EKAGENTYVQSNNSGIANITTSGVMGKGKLIAGTLEMSNVDLTDQFTDMIITQRGFQAGA 445 Query: 225 TLIDENEKSMLEAIR 239 I ++ + + Sbjct: 446 KTIQTSDTMLETVLN 460 >gi|306820122|ref|ZP_07453770.1| flagellar hook protein FlgE [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551900|gb|EFM39843.1| flagellar hook protein FlgE [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 474 Score = 105 bits (261), Expect = 7e-21, Method: Composition-based stats. Identities = 39/206 (18%), Positives = 81/206 (39%), Gaps = 13/206 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50 M S N +++ + R+ + +N++N +TV F+ + F + + Sbjct: 1 MMRSMNSAVSSLKNHQARMDVIGNNIANVNTVAFKAARTTFKDTYSQLTRAASGSSGDRG 60 Query: 51 --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 + Q + + + G+ +T D ++G+ +F ++ P G TRDG F V Sbjct: 61 GINPGQIGLGMNLSSIDNAMDKGTVETTNINTDLYIDGEGFFMVDGPDGRFYTRDGNFGV 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQK-DEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 ++G LV+ +G Y + A I +K D+I + + I G S ++ Sbjct: 121 DEEGYLVNKNGNYVMGYQADKDGNIIEKIDKIQVPIKDVLKPKVTSNIQLEGNLSSKTAE 180 Query: 168 GFVRRENSGISPNIPPTPLEDLSGVT 193 G + ++ P++ Sbjct: 181 GLPSPLPNTLATIYDKKPVDPADPSK 206 Score = 87.6 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 15/98 (15%), Positives = 33/98 (33%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLED 201 + K + + + G ++ ++ SP + G LE Sbjct: 374 FNNGDTKALGQIVTATFSNVNGLQKQGDNLWSPTENSGEANINKPGSGGNGALLSGALEM 433 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E MI + F + + +I ++ + E + Sbjct: 434 SNVDLAKEFTNMIVTQRGFQANSRVITTTDQMLEELVN 471 >gi|268316347|ref|YP_003290066.1| hypothetical protein Rmar_0780 [Rhodothermus marinus DSM 4252] gi|262333881|gb|ACY47678.1| protein of unknown function DUF1078 domain protein [Rhodothermus marinus DSM 4252] Length = 415 Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats. Identities = 31/145 (21%), Positives = 61/145 (42%), Gaps = 11/145 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S G++ + + R+ +++N++N +T F+ + F+E++G + + Sbjct: 1 MIRSLRTGVSGLKSHQVRMDVISNNIANVNTTAFKRGRAAFNELLGQTLLGVGRTAGGRG 60 Query: 56 ------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109 V+ G ++ G+ +TG D + GD +F + I LTR G F + Sbjct: 61 INPSYVGLGVSVGSIDVNFAQGALENTGVATDLGINGDGFFVVRGGDRIYLTRAGNFTIN 120 Query: 110 DDGSLVSASGKYPVLDMASVPIQIP 134 G LV+ SG ++ Sbjct: 121 RFGELVTNSGLQVQGWAFDENGELQ 145 Score = 83.4 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 24/164 (14%), Positives = 50/164 (30%), Gaps = 7/164 (4%) Query: 83 ALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPV-LDMASVPIQIPQKDEIFN 141 AL+ W T + ++ D I Sbjct: 249 ALQTFDWDIDNDGTLESFTLNLAGADDALTQYAGSTTATVRDQDGQPPGSLIGFSINQEG 308 Query: 142 VGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP------PTPLEDLSGVTVK 195 + E + + I + L SV+ G + ++ S +L+ + Sbjct: 309 IVELNFSNGYQQKIYQLALGSVNNVNGLQQVGDNLWSLTSSSGDLALGRAGVELNRTVIV 368 Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G LE SN + E MI + + + +I +++ + E ++ Sbjct: 369 AGTLEMSNVDLATEFTDMIVTQRGYQASARIITTSDEMLQELVQ 412 >gi|49480334|ref|YP_035891.1| flagellar basal body rod protein FlgG [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49331890|gb|AAT62536.1| flagellar basal-body rod protein [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 257 Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats. Identities = 44/255 (17%), Positives = 87/255 (34%), Gaps = 15/255 (5%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53 IG + QR++ ++N++N T GF+ + + +I Sbjct: 1 MNGLYIGSMGMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIG 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDA-----WFALESPRGIILTRDGRFKV 108 V +++ G+ T ++ DF L+ +F LTRDG F + Sbjct: 61 SVDYAVVPAATHVNLVQGNIQMTNSDTDFLLDDGTAGTASFFVTSKNNETFLTRDGSFTL 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV--DMS 166 D L + SG + + + + IA + +V + + Sbjct: 121 NSDRYLQTTSGAFVMGENHERIRIPEGAKVAVQADGTLYDAVTQNNIARLQTKTVGAEAN 180 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 ++REN + TVK LE+SN + EM ++ + ++ + Sbjct: 181 NRLIQRENKSFTLAEGNIADLPNGVGTVKNYMLENSNVDMTKEMADLMTDQRMISASQRV 240 Query: 227 IDENEKSMLEAIRNI 241 + +K + I Sbjct: 241 MTSFDKIYEKEANEI 255 >gi|260768781|ref|ZP_05877715.1| flagellar basal-body rod protein FlgF [Vibrio furnissii CIP 102972] gi|260616811|gb|EEX41996.1| flagellar basal-body rod protein FlgF [Vibrio furnissii CIP 102972] Length = 229 Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats. Identities = 39/229 (17%), Positives = 88/229 (38%), Gaps = 6/229 (2%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIS 75 A+N+++ +TVGF+ ++ S+ + + ++ + + G+ + Sbjct: 1 MLAQEVRANNLAHANTVGFK-SLMEHSDAMAVAGSGFQSSVT-TRTNSASTNFTPGAEVR 58 Query: 76 TGTELDFALEGDAWFA---LESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQ 132 TG +LD + G +F+ + +R G F+++ DG L+ + D + Sbjct: 59 TGRDLDVQIPGRGFFSVAGQAGEPEELYSRAGNFRLSSDGLLLLGDRQVLGEDGPIEVPE 118 Query: 133 IPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV 192 + + G + L V+ + SG+ L V Sbjct: 119 FQAINIASDGAISITPPGGGAEMQIGLLKLVNPEYAEMTLHTSGLFVPKQGETLAFDPEV 178 Query: 193 TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 V+ G+LE SN +S+ E+ M+ LT+++ + + + + + Sbjct: 179 AVRSGYLEGSNVSSLDELVSMMALTRQYEMQVKAMASASE-IEKMGNQL 226 >gi|313895889|ref|ZP_07829443.1| fagellar hook-basal body protein [Selenomonas sp. oral taxon 137 str. F0430] gi|312975314|gb|EFR40775.1| fagellar hook-basal body protein [Selenomonas sp. oral taxon 137 str. F0430] Length = 274 Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 69/212 (32%), Gaps = 14/212 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ + + R+ + +N++N +T GF+ +V F +++ + Sbjct: 1 MMRSMFSGVSGLKSHQTRMDVIGNNIANVNTTGFKAGRVTFEDMLSQTLSGAAAPGTTIG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTRDGRFK 107 Q V+ G GS TG D AL G++ F ++ TR+G F+ Sbjct: 61 GTNPKQIGLGVSVGSIDTIFTDGSVQGTGKNTDLALSGGNSTFIVKRGEQTYYTRNGAFE 120 Query: 108 VTDDGSLVSA-SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 G+ V SG + + E E + AT + Sbjct: 121 FDAKGNYVLPGSGLHVQGWVNKTTEHSKVSTEGAVENIVVETGKMMPPKATEKATYSENL 180 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGF 198 + TP + + G Sbjct: 181 DSTTPMITGYTFSDTRTTPPTAVVRTSANDGM 212 >gi|289578425|ref|YP_003477052.1| fagellar hook-basal body protein [Thermoanaerobacter italicus Ab9] gi|289528138|gb|ADD02490.1| fagellar hook-basal body protein [Thermoanaerobacter italicus Ab9] Length = 413 Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats. Identities = 30/170 (17%), Positives = 58/170 (34%), Gaps = 12/170 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S ++ A + R+ + +N++N +TVG++ ++ F E+ Sbjct: 1 MLRSMYSAVSGLKAHQARMDVIGNNIANVNTVGYKASRMTFKEIFSQTIKGASAPQGNGG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 + Q VA G T D +++G+ +F + + + TR G F Sbjct: 61 GTNPQQIGLGVAIASIDTLFTRGGAQRTDNPTDLSIDGNGFFIVSNGGANLYTRAGNFSF 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158 G LV+ G + M++ + S T Sbjct: 121 DSQGDLVTPDGYKVLGWMSTDGKTVNTDTGNLVPISIKNWSSIAPAATTQ 170 Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 33/92 (35%), Gaps = 5/92 (5%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSM 207 ++I + + G + N+ + + T + G LE SN + Sbjct: 319 QIIGQIAIADFQNPMGLEKVGNTMFINTVNSGEPMIGAAGTGTRGSINPGTLEMSNVDLA 378 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E MI + F + +I +++ + + + Sbjct: 379 NEFADMIVTQRGFQANAKIITASDEMLQDLVN 410 >gi|220932517|ref|YP_002509425.1| flagellar hook protein FlgE, epsilon proteobacterial [Halothermothrix orenii H 168] gi|219993827|gb|ACL70430.1| flagellar hook protein FlgE, epsilon proteobacterial [Halothermothrix orenii H 168] Length = 519 Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats. Identities = 33/178 (18%), Positives = 66/178 (37%), Gaps = 12/178 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ A + R+ + +N++N +TVG+++ V F E++ Sbjct: 1 MMRSMYAGVSGLKAHQTRMDVIGNNIANVNTVGYKSSSVTFKEMLSQTLRGAKAPQGGRG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 Q V G + G+ TG D A++G+ +F + + + + TR GR + Sbjct: 61 GVNPMQVGLGVGVGSITVDHTQGNLQPTGVTTDLAIQGNGYFVVNNGQKNLFTRAGRLNL 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 D+G LV+ S + + + G ++ + Sbjct: 121 DDNGYLVNVSNGFVIQGWMADISTGTINSGQDPENIHITDEYSIMNARATGNATISGN 178 Score = 79.5 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 13/92 (14%), Positives = 33/92 (35%), Gaps = 5/92 (5%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSM 207 + I + + G ++ + SP+ + + G LE SN + Sbjct: 425 RPIGQIAIAYFVNPSGLMKEGETLFSPSENSGDPQIGEAGSGGRGKISVGNLEMSNVDLA 484 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + MI + F + + +I ++ + + + Sbjct: 485 EQFTDMITTQRGFQANSKIITTTDQMLQDLVN 516 >gi|291287005|ref|YP_003503821.1| fagellar hook-basal body protein [Denitrovibrio acetiphilus DSM 12809] gi|290884165|gb|ADD67865.1| fagellar hook-basal body protein [Denitrovibrio acetiphilus DSM 12809] Length = 209 Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats. Identities = 48/242 (19%), Positives = 90/242 (37%), Gaps = 33/242 (13%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M G A + L A+N++N +T F++ ++ +E+ + V+ Sbjct: 1 MMQGLYTGANAISVYKNSLINTANNVANINTPYFKSNTLQLNEM----------EQGGVS 50 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 ++++ IS+G LDF ++G F LE G TR+G F + +G +V + G+ Sbjct: 51 ISSIRQNQDLSYTISSGRTLDFVIDGSGQFRLEDNNGTSYTRNGVFYLDAEGDVVDSGGR 110 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 + D+ E GE G V S G EN + Sbjct: 111 KLLEDVVKPG-------ESAESLSVGEDGSFTVDGEFRGKIDVYDSYGNKIPENLYM--- 160 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 ++ G LE S+ + E+ MI F++ T+ + + + + Sbjct: 161 -------------LRSGMLEVSDVDYAREVVDMIVTKNAFSANTSSVRTYDDMLGLIVNL 207 Query: 241 IA 242 + Sbjct: 208 VG 209 >gi|206975016|ref|ZP_03235931.1| putative flagellar basal-body rod protein [Bacillus cereus H3081.97] gi|217959255|ref|YP_002337803.1| flagellar basal body rod protein FlgG [Bacillus cereus AH187] gi|229138473|ref|ZP_04267062.1| Flagellar basal-body rod protein flgG [Bacillus cereus BDRD-ST26] gi|206747035|gb|EDZ58427.1| putative flagellar basal-body rod protein [Bacillus cereus H3081.97] gi|217066007|gb|ACJ80257.1| putative flagellar basal-body rod protein [Bacillus cereus AH187] gi|228645010|gb|EEL01253.1| Flagellar basal-body rod protein flgG [Bacillus cereus BDRD-ST26] Length = 257 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 45/255 (17%), Positives = 84/255 (32%), Gaps = 15/255 (5%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53 IG + QR++ ++N++N T GF+ + + +I Sbjct: 1 MNGLYIGSMGMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIG 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDF-----ALEGDAWFALESPRGIILTRDGRFKV 108 V +++ G+ T + DF A ++F LTRDG F + Sbjct: 61 SVDYAVVPAATHVNLVQGNIQMTNSATDFFLDDGANGTTSFFVTSKNDETFLTRDGSFTI 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 D L ++SG Y + + IA + +VD Sbjct: 121 NSDRYLQTSSGAYVMGENNERIRIPEGAKVAVQPDGTLYDEGTQNNIARLQTKTVDAEAN 180 Query: 169 --FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 ++REN + VK LE+SN + EM ++ + ++ + Sbjct: 181 SRLMQRENKSFTLAEGNIADLPNGTGLVKNHMLENSNVDMTKEMADLMTDQRMISASQRV 240 Query: 227 IDENEKSMLEAIRNI 241 + +K + I Sbjct: 241 MTSFDKIYEKEANEI 255 >gi|42780864|ref|NP_978111.1| flagellar basal body rod protein FlgG [Bacillus cereus ATCC 10987] gi|42736784|gb|AAS40719.1| flagellar basal-body rod protein, putative [Bacillus cereus ATCC 10987] Length = 257 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 45/255 (17%), Positives = 85/255 (33%), Gaps = 15/255 (5%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53 IG + QR++ ++N++N T GF+ + + +I Sbjct: 1 MNGLYIGSMGMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIG 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDF-----ALEGDAWFALESPRGIILTRDGRFKV 108 V +++ G+ T + DF A ++F LTRDG F + Sbjct: 61 SVDYAVVPAATHVNLVQGNIQMTNSATDFFLDDGANGTTSFFVTSKNDETFLTRDGSFTI 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM--S 166 D L ++SG + + + IA + +VD + Sbjct: 121 NSDRYLQTSSGAFVMGENNERIRIPEGAKVAVQADGTLYDEVTQNNIARLQTKTVDAEAN 180 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 V+REN + VK LE+SN + EM ++ + ++ + Sbjct: 181 NRLVQRENKSFTLAEGNIADLPNGTGLVKNHMLENSNVDMTKEMADLMTDQRMISASQRV 240 Query: 227 IDENEKSMLEAIRNI 241 + +K + I Sbjct: 241 MTSFDKIYEKEANEI 255 >gi|284989548|ref|YP_003408102.1| flagellar hook-basal body protein [Geodermatophilus obscurus DSM 43160] gi|284062793|gb|ADB73731.1| flagellar hook-basal body protein [Geodermatophilus obscurus DSM 43160] Length = 408 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 35/166 (21%), Positives = 64/166 (38%), Gaps = 12/166 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S N ++ A + +L +N++N +TVG++ + F + + + + Sbjct: 1 MLRSMNSAISGLRAHQTKLDVTGNNIANVNTVGYKASQTVFEDTLSQVVRNGSAPTAQAG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 Q V + E GS +TG DF + GD +F ++ + TR G F Sbjct: 61 GTNPAQVGLGVKVAGITTNFEQGSAQNTGRSTDFMISGDGFFITQAGNEQLYTRAGSFSY 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV 154 G+LV+ G MA+ + G++ Q + Sbjct: 121 DGAGNLVTPDGALLQGWMATDGVVNTNGPIRQLTVPFGDVMQPTET 166 Score = 74.9 bits (182), Expect = 8e-12, Method: Composition-based stats. Identities = 19/129 (14%), Positives = 40/129 (31%), Gaps = 6/129 (4%) Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQK-GKVIATMGLYSVDMSQGFVRRENS 175 SG P + + + G S + I + L + G + NS Sbjct: 277 PSGLTPARVDGNAMGSLQSISLSGDGTVMGVYSNNLREPIGKLALATFANPGGLAKAGNS 336 Query: 176 GISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 ++ G LE SN + E +I + F + + +I + Sbjct: 337 SFRVGDNSGQPAIGEPGGGGRGSLVAGALEMSNVDLAEEFTGLIVAQRGFQANSRVISSS 396 Query: 231 EKSMLEAIR 239 ++ + + + Sbjct: 397 DEVLQDLVN 405 >gi|206895667|ref|YP_002246664.1| flagellar hook-basal body complex protein, putative [Coprothermobacter proteolyticus DSM 5265] gi|206738284|gb|ACI17362.1| flagellar hook-basal body complex protein, putative [Coprothermobacter proteolyticus DSM 5265] Length = 227 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 36/239 (15%), Positives = 83/239 (34%), Gaps = 15/239 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M +++ L L + + DN+ + T G++ F+ + Sbjct: 1 MLRGIYNAVSSNLMLLRAQDVIEDNLLHIQTPGYKQKNFAFTLTEQRPIVGLGNVSFGGL 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 Y+S E S TG LD A+ G + A+++ + R V + G LV+ G Sbjct: 61 LSYPYVSIEQASLEETGRNLDLAVSG-GFLAVDANGQRLWASSLRMLVDEQGYLVTPEGY 119 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 + + + + +I+ + + V + FV + Sbjct: 120 RVLGKNGPIKWNENYNVDQQGNILLNDQIVDSFLISDVNVQEVVNDRYFVGEQLQSNFR- 178 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 V + +LE SN + + ++ ++ + + + S ++ + ++ + I Sbjct: 179 -------------VFQTYLETSNVDEIGQVTALMTILRHYQSNVKVVQAEDAALAKIIN 224 >gi|302338085|ref|YP_003803291.1| fagellar hook-basal body protein [Spirochaeta smaragdinae DSM 11293] gi|301635270|gb|ADK80697.1| fagellar hook-basal body protein [Spirochaeta smaragdinae DSM 11293] Length = 460 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 32/141 (22%), Positives = 57/141 (40%), Gaps = 12/141 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 S G++ + R+ + +N+SN +TVGF+ +V F +++ + Sbjct: 1 MRSLYAGVSGLQNHQTRMDVIGNNISNVNTVGFKKGRVNFQDLLSQTMSGAARPTDEVGG 60 Query: 54 ----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109 Q + GS +TG D A++GD +F S TR G F + Sbjct: 61 VNPKQVGLGMNVASIDTVHTQGSLQTTGIMTDIAIQGDGFFIERSGDKEFYTRAGAFGLD 120 Query: 110 DDGSLVSASGKYPVLDMASVP 130 ++G+LV+ S V + Sbjct: 121 ENGTLVNPSNGLRVQGWMAQD 141 Score = 80.7 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 17/122 (13%), Positives = 36/122 (29%), Gaps = 5/122 (4%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 D + K + V + + + + L S G + S + Sbjct: 336 KQDGYGMGYLESFKIDQSGVITGVYSNGANRTLGQVALASFTNPGGLEKAGESTFVVSNN 395 Query: 183 PTPLEDLS-----GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + G LE SN + + MI + F + + I +++ + E Sbjct: 396 SGEARIGESGVAGKGKLIAGALEMSNVDLAEQFTDMIVTQRGFQANSRTITTSDQMLQEL 455 Query: 238 IR 239 + Sbjct: 456 LT 457 >gi|288573021|ref|ZP_06391378.1| protein of unknown function DUF1078 domain protein [Dethiosulfovibrio peptidovorans DSM 11002] gi|288568762|gb|EFC90319.1| protein of unknown function DUF1078 domain protein [Dethiosulfovibrio peptidovorans DSM 11002] Length = 875 Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 30/140 (21%), Positives = 56/140 (40%), Gaps = 12/140 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--------- 51 M S G++ A ++RL V +N++N +TVGF+ V F +++ + Sbjct: 1 MLRSLLTGVSGAKAHQKRLDVVGNNIANVNTVGFKKSTVVFQDLLSQTERGAMAPDGNVG 60 Query: 52 ---IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 Q V G+ TG D A++G+ ++ + + + TR G+F + Sbjct: 61 GVNAKQVGLGVQVAGIETIHTQGTVSQTGNRTDMAIQGEGYYVVRNGAENLYTRAGQFVL 120 Query: 109 TDDGSLVSASGKYPVLDMAS 128 + L + Y V Sbjct: 121 DSNSDLAMSGTGYRVQGNEM 140 Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 24/136 (17%), Positives = 45/136 (33%), Gaps = 7/136 (5%) Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 T GS + + ++ VG +G + M L QG Sbjct: 739 TQYGSAFTTKPYTQNGYSMGILEDFSVSNDGTIVGIYDNGQNRG--LYKMALAMFANPQG 796 Query: 169 FVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223 V+ N+ S +I ++ T+ LE SN + E +I + F + Sbjct: 797 LVKTGNTCFSKSINSGDPSIVNAMVEGAGTIAGSSLEYSNVDITEEFTDLITTQRGFQAS 856 Query: 224 TTLIDENEKSMLEAIR 239 +I ++ + E + Sbjct: 857 ARVITTSDSVLEELLN 872 >gi|315186381|gb|EFU20141.1| fagellar hook-basal body protein [Spirochaeta thermophila DSM 6578] Length = 462 Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 30/139 (21%), Positives = 55/139 (39%), Gaps = 12/139 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ + R+ + +N+SN +T GF+ +V F +++ + Sbjct: 1 MMRSLYAGVSGLQNHQIRMDVIGNNISNVNTTGFKKGRVNFHDMISQTLSGAARPTEEVG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 Q + GS +TG D A++G+ +F L TR G F + Sbjct: 61 GVNPKQVGLGMTIASIDTIHTQGSLQTTGVMTDVAVQGEGFFILRKGDRSFYTRAGVFGL 120 Query: 109 TDDGSLVSASGKYPVLDMA 127 ++G LV+ + V Sbjct: 121 DEEGYLVNPANGLRVQGWR 139 Score = 82.6 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 13/98 (13%), Positives = 32/98 (32%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLED 201 + + + + L + G + + ++ P + G LE Sbjct: 362 YSNGNNRPLGQIALATFVNPGGLEKEGETMFRVSLNSGDPNVGPPNFAGKGKLIAGALEM 421 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + MI + F + + I +++ + E + Sbjct: 422 SNVDLAEAFTDMIVTQRGFQANSRTITTSDQMLQELLT 459 >gi|297584044|ref|YP_003699824.1| fagellar hook-basal body protein [Bacillus selenitireducens MLS10] gi|297142501|gb|ADH99258.1| fagellar hook-basal body protein [Bacillus selenitireducens MLS10] Length = 424 Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 39/194 (20%), Positives = 70/194 (36%), Gaps = 18/194 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G+ + +L + +N+SN +T GF+ +V F+++V Sbjct: 1 MIRSLYSGIGGMNNFQTKLDVIGNNISNVNTFGFKKGRVTFNDLVSQQLAGASSPQEGER 60 Query: 49 -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107 + Q ++ GS STG +LD A+ GD +F + TR G F Sbjct: 61 GGTNPRQVGLGGSTASIDTINTQGSLQSTGRDLDMAISGDGFFQVADGGQNFYTRAGNFY 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 + ++G LV+A G I + + ++ G+ + VD+ Sbjct: 121 LDENGMLVNADGLRLQGYGVGDDGAIDEAAGVGDL-----FIPAGEQVDPEATSQVDLRG 175 Query: 168 GFVRRENSGISPNI 181 G + Sbjct: 176 NLNADSEIGEERTV 189 Score = 79.1 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 36/92 (39%), Gaps = 5/92 (5%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSM 207 +++ + L + + G + ++ + + ++ LE SN + Sbjct: 330 RLLGQVALVNFNNPSGLSKAGSNLFEVSNNSGEPQVGLAGIGGRGSLVGATLEMSNVDLS 389 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E +MI + F + T +I +++ + E I Sbjct: 390 EEFAEMIVSQRGFQANTRMITTSDEILQELIN 421 >gi|295399817|ref|ZP_06809798.1| fagellar hook-basal body protein [Geobacillus thermoglucosidasius C56-YS93] gi|294978220|gb|EFG53817.1| fagellar hook-basal body protein [Geobacillus thermoglucosidasius C56-YS93] Length = 334 Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 38/213 (17%), Positives = 69/213 (32%), Gaps = 22/213 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M S G+ A + +L + +N++N +T GF+ + F +++ + Sbjct: 1 MLRSMYSGINAMKNFQVKLDVIGNNIANVNTYGFKKGRTIFQDLISQTISGASAPSQGRG 60 Query: 61 SGKEYL------------SKEVGSFISTGTELDFALEGDAWFALESP------RGIILTR 102 GS TG LD A+ GD +F + + TR Sbjct: 61 GTNPRQVGLGSQLAAIDTIHTTGSTQPTGRVLDLAISGDGFFQVAESADNTNFTNVRYTR 120 Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162 G F + DG LV++ G Y V A ++ A + Sbjct: 121 AGNFYLDKDGYLVTSDGYYVVGFAAYATGTYDPDGAAGATPPVNNVTLSPLPSAIDPKFD 180 Query: 163 VDMSQGFVRRENSGISPNIPPTPLEDLSGVTVK 195 + + +G++P I + V+ Sbjct: 181 FSSN----PPKYTGVAPTINNFTVNTGETTNVQ 209 Score = 85.7 bits (210), Expect = 6e-15, Method: Composition-based stats. Identities = 28/194 (14%), Positives = 61/194 (31%), Gaps = 9/194 (4%) Query: 51 DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTD 110 + T + L A++ F+ P+ + + Sbjct: 142 GFAAYATGTYDPDGAAGATPPVNNVTLSPLPSAIDPKFDFSSNPPKYTGVAPTINNFTVN 201 Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170 G + K + + + I Q I V G + G+++ + G Sbjct: 202 TGETTNVQYKPIKIPTDAQSVSIGQDGSITYVDRFGTLRWAGQLVLAK----FPNNGGLE 257 Query: 171 RRENSGIS-PNIPPTPLED----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225 + + TP+ + ++ G LE SN + E +MI + F + T Sbjct: 258 KAGANLYRDTPNSGTPILNFAGAAGIGAIQSGALEMSNVDLAEEFTEMIVAQRGFQANTR 317 Query: 226 LIDENEKSMLEAIR 239 +I +++ + E + Sbjct: 318 IITTSDEILQELVN 331 >gi|332298237|ref|YP_004440159.1| flagellar hook-basal body protein [Treponema brennaborense DSM 12168] gi|332181340|gb|AEE17028.1| flagellar hook-basal body protein [Treponema brennaborense DSM 12168] Length = 463 Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 31/142 (21%), Positives = 58/142 (40%), Gaps = 12/142 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S G++ + RL + +N++N +T GF+ +V F +++ + + Sbjct: 1 MMRSLYSGVSGMQNHQTRLDVIGNNVANVNTTGFKRGRVNFQDMISQQLSGAAKPTTEVG 60 Query: 56 -------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 V G+ STG D A++G+ +F L++ TR G F + Sbjct: 61 GVNPKEVGLGVMVASIDTVFTQGNLQSTGVATDVAIQGNGFFVLKNGEETFYTRAGAFGL 120 Query: 109 TDDGSLVSASGKYPVLDMASVP 130 DG+LV+ + V + Sbjct: 121 DSDGTLVNPANGLRVQGWMAQE 142 Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 14/123 (11%), Positives = 37/123 (30%), Gaps = 5/123 (4%) Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 D ++ K + + + +V+ + L + G + ++ + Sbjct: 338 YYQDGYTMGYLDNFKIDSSGIITGVYSNGTNRVLGQIALATFSNQGGLEKAGDNTYVQSN 397 Query: 182 PPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 ++ G LE SN + + MI + F + + I + + Sbjct: 398 NSGLANIGTSGIAGKGSMLAGSLEMSNVDLTEQFTDMIVTQRGFQASSKTIQTADTLLDT 457 Query: 237 AIR 239 + Sbjct: 458 VMN 460 >gi|229195985|ref|ZP_04322737.1| Flagellar basal-body rod protein flgG [Bacillus cereus m1293] gi|228587367|gb|EEK45433.1| Flagellar basal-body rod protein flgG [Bacillus cereus m1293] Length = 257 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 45/255 (17%), Positives = 84/255 (32%), Gaps = 15/255 (5%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53 IG + QR++ ++N++N T GF+ + + +I Sbjct: 1 MNGLYIGSMGMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIG 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDF-----ALEGDAWFALESPRGIILTRDGRFKV 108 V +++ G+ T + DF A ++F LTRDG F + Sbjct: 61 SVDYAVVPAATHVNLVQGNIQMTNSATDFFLDDGANGTTSFFVTSKNDETFLTRDGSFTI 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 D L ++SG Y + + IA + +VD Sbjct: 121 NSDRYLQTSSGAYVMGENNERIRIPEGAKVAVQADGTLYDEGTQNNIARLQTKTVDAEAN 180 Query: 169 --FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 ++REN + VK LE+SN + EM ++ + ++ + Sbjct: 181 SRLMQRENKSFTLAEGNIADLPNGTGLVKNHMLENSNVDMTKEMADLMTNQRMISASQRV 240 Query: 227 IDENEKSMLEAIRNI 241 + +K + I Sbjct: 241 MTSFDKIYEKEANEI 255 >gi|182418416|ref|ZP_02949710.1| flagellar basal-body rod protein FlgG [Clostridium butyricum 5521] gi|237666817|ref|ZP_04526802.1| flagellar basal body rod protein [Clostridium butyricum E4 str. BoNT E BL5262] gi|182377798|gb|EDT75342.1| flagellar basal-body rod protein FlgG [Clostridium butyricum 5521] gi|237658016|gb|EEP55571.1| flagellar basal body rod protein [Clostridium butyricum E4 str. BoNT E BL5262] Length = 259 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 51/257 (19%), Positives = 101/257 (39%), Gaps = 15/257 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGA---------- 47 M F ++ + L+ T+ +N++N + G++ + F EV+ + Sbjct: 1 MIRGFYNSVSGLITLQNEEETITNNITNVNNNGYKKRLLTKQSFDEVMISNRQKLSGDKY 60 Query: 48 IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRF 106 ++N+I V + GSF ST + DFA++G +F + + TRDG F Sbjct: 61 VRNNIGTMNLGVKTSDVETIFTQGSFKSTDKQTDFAIDGRGFFVARNANGQQVYTRDGNF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA-TMGLYSVDM 165 KV G L++ G + + + P N + + T L +VD Sbjct: 121 KVNQQGYLITNDGCEVMGNNNTTGATEPIYVGNMNFSLDSNNNIDLAGVGATHKLVTVDF 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225 + + + V V + LE SN +S EM +++ + ++F + Sbjct: 181 DNEDYKNLEPLGDNYVTTANPIYNARVNVVQNALESSNVDSTDEMIKLMQVKRQFETNQK 240 Query: 226 LIDENEKSMLEAIRNIA 242 I ++++ +A + Sbjct: 241 FIKMQDETVQKATTELG 257 >gi|229155343|ref|ZP_04283453.1| Flagellar basal-body rod protein flgG [Bacillus cereus ATCC 4342] gi|228628058|gb|EEK84775.1| Flagellar basal-body rod protein flgG [Bacillus cereus ATCC 4342] Length = 257 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 46/255 (18%), Positives = 86/255 (33%), Gaps = 15/255 (5%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53 IG + QR++ ++N++N T GF+ + + +I Sbjct: 1 MNGLYIGSMGMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIG 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEG-----DAWFALESPRGIILTRDGRFKV 108 V +++ G+ T + DF L+ ++F LTRDG F + Sbjct: 61 SVDYAVVPAATHVNLVQGNIQMTNSATDFFLDDGASGTTSFFVTSKNDETFLTRDGSFTI 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM--S 166 D L ++SG Y + + IA + +VD + Sbjct: 121 NSDRYLQTSSGAYVMGENNERIRIPEGAKVAVQADGTLYDEVTQNNIARLQTKTVDAEAN 180 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 V+REN + VK LE+SN + EM ++ + ++ + Sbjct: 181 NRLVQRENKSFTLAEGNITDLPNGTGLVKNHMLENSNVDMTKEMADLMTDQRMISASQRV 240 Query: 227 IDENEKSMLEAIRNI 241 + +K + I Sbjct: 241 MTSFDKIYEKEANEI 255 >gi|30261777|ref|NP_844154.1| flagellar basal body rod protein FlgG [Bacillus anthracis str. Ames] gi|47527010|ref|YP_018359.1| flagellar basal body rod protein FlgG [Bacillus anthracis str. 'Ames Ancestor'] gi|49184611|ref|YP_027863.1| flagellar basal body rod protein FlgG [Bacillus anthracis str. Sterne] gi|65319054|ref|ZP_00392013.1| COG4786: Flagellar basal body rod protein [Bacillus anthracis str. A2012] gi|167633188|ref|ZP_02391513.1| putative flagellar basal-body rod protein [Bacillus anthracis str. A0442] gi|167638782|ref|ZP_02397057.1| putative flagellar basal-body rod protein [Bacillus anthracis str. A0193] gi|170686326|ref|ZP_02877548.1| putative flagellar basal-body rod protein [Bacillus anthracis str. A0465] gi|170706443|ref|ZP_02896903.1| putative flagellar basal-body rod protein [Bacillus anthracis str. A0389] gi|177650448|ref|ZP_02933415.1| putative flagellar basal-body rod protein [Bacillus anthracis str. A0174] gi|228914350|ref|ZP_04077965.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229121324|ref|ZP_04250555.1| Flagellar basal-body rod protein flgG [Bacillus cereus 95/8201] gi|229600237|ref|YP_002866164.1| putative flagellar basal-body rod protein [Bacillus anthracis str. A0248] gi|254683274|ref|ZP_05147135.1| flagellar basal body rod protein FlgG [Bacillus anthracis str. CNEVA-9066] gi|254723857|ref|ZP_05185643.1| flagellar basal body rod protein FlgG [Bacillus anthracis str. A1055] gi|254734627|ref|ZP_05192339.1| flagellar basal body rod protein FlgG [Bacillus anthracis str. Western North America USA6153] gi|254741036|ref|ZP_05198724.1| flagellar basal body rod protein FlgG [Bacillus anthracis str. Kruger B] gi|254755279|ref|ZP_05207313.1| flagellar basal body rod protein FlgG [Bacillus anthracis str. Vollum] gi|254759816|ref|ZP_05211840.1| flagellar basal body rod protein FlgG [Bacillus anthracis str. Australia 94] gi|30256005|gb|AAP25640.1| putative flagellar basal-body rod protein [Bacillus anthracis str. Ames] gi|47502158|gb|AAT30834.1| putative flagellar basal-body rod protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49178538|gb|AAT53914.1| flagellar basal-body rod protein, putative [Bacillus anthracis str. Sterne] gi|167513246|gb|EDR88617.1| putative flagellar basal-body rod protein [Bacillus anthracis str. A0193] gi|167531226|gb|EDR93904.1| putative flagellar basal-body rod protein [Bacillus anthracis str. A0442] gi|170128541|gb|EDS97408.1| putative flagellar basal-body rod protein [Bacillus anthracis str. A0389] gi|170670023|gb|EDT20764.1| putative flagellar basal-body rod protein [Bacillus anthracis str. A0465] gi|172083592|gb|EDT68652.1| putative flagellar basal-body rod protein [Bacillus anthracis str. A0174] gi|228662169|gb|EEL17778.1| Flagellar basal-body rod protein flgG [Bacillus cereus 95/8201] gi|228845344|gb|EEM90380.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229264645|gb|ACQ46282.1| putative flagellar basal-body rod protein [Bacillus anthracis str. A0248] Length = 257 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 44/255 (17%), Positives = 87/255 (34%), Gaps = 15/255 (5%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53 IG + QR++ ++N++N T GF+ + + +I Sbjct: 1 MNGLYIGSMGMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIG 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDA-----WFALESPRGIILTRDGRFKV 108 V +++ G+ T ++ DF L+ +F LTRDG F + Sbjct: 61 SVDYAVVPAATHVNLVQGNIQMTNSDTDFLLDDGTAGTASFFVTSKNNETFLTRDGSFTL 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV--DMS 166 D L + SG + + + + IA + +V + + Sbjct: 121 NSDRYLQTTSGAFVMGENNERIRIPEGAKVAVQADGTLYDAVTQNNIARLQTKTVGAEAN 180 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 ++REN + TVK LE+SN + EM ++ + ++ + Sbjct: 181 NRLIQRENKSFTLAEGNIADLPNGVGTVKNYMLENSNVDMTKEMADLMTDQRMISASQRV 240 Query: 227 IDENEKSMLEAIRNI 241 + +K + I Sbjct: 241 MTSFDKIYEKEANEI 255 >gi|78224295|ref|YP_386042.1| hypothetical protein Gmet_3103 [Geobacter metallireducens GS-15] gi|78195550|gb|ABB33317.1| conserved hypothetical protein [Geobacter metallireducens GS-15] Length = 419 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 36/165 (21%), Positives = 71/165 (43%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 ++ G++ A + +S + +N+SN +T+GF+ ++ FS+V+ + + Q V Sbjct: 5 SALYTGISGLNANGEAMSVIGNNISNVNTIGFKQGRMLFSDVLSSTISGGSQIGRGVQIQ 64 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 GSF ST + D A++GD++F +++ G TR G F D +LV+ G Sbjct: 65 TVENQFTQGSFESTESGTDLAVQGDSFFVVQNDNGRYYTRAGAFTFDKDKTLVNPEGYQV 124 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 + + + A + ++D +Q Sbjct: 125 QGYGIIPSSGLADGVMKPIDLTTFATTPPKQTSAVDMVLNLDSTQ 169 Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 32/221 (14%), Positives = 69/221 (31%), Gaps = 12/221 (5%) Query: 27 SNTDTVGFRTIKVKFSEVVGAIKN-DIDQKISFVASGKEYLSKEVGSFISTGTELDFALE 85 ++T TV FR + + + S L+ + ++ T L A + Sbjct: 200 AHTATVYFRKTAANAWDWHAILPDAQAGTPGSSTTPLDGTLTFDATGALTGQTPLASAAQ 259 Query: 86 GDAWFALESPRGIILTRDG--RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVG 143 + + IL G S+VS+ + + I K + V Sbjct: 260 NITFTGGVTAPQPILFGMGVGATTQYASPSIVSSQTQDGYYQGTLTKVTIDDKGYVNGVY 319 Query: 144 EKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGF 198 GE+ + + + L + G + + + V Sbjct: 320 SNGELKK----LYQVALAKFASTTGLSKAGGTLFEETLDSGQPLFSNASTPGVGKVLANS 375 Query: 199 LEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 LE SN + + +MI + +++ + I ++ + E + Sbjct: 376 LEQSNVDMAAQFVKMITTQRGYSANSKTITTADEMLQEVLN 416 >gi|302392387|ref|YP_003828207.1| flagellar hook-basal body protein [Acetohalobium arabaticum DSM 5501] gi|302204464|gb|ADL13142.1| flagellar hook-basal body protein [Acetohalobium arabaticum DSM 5501] Length = 557 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 36/183 (19%), Positives = 68/183 (37%), Gaps = 12/183 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-------- 52 M S G++ A + ++ + +N+SN +T G++ +V F E++ Sbjct: 1 MMRSMYAGVSGLKAHQTKMDVIGNNISNVNTTGYKGSRVTFKEMLNQTMEGASAPQDGRG 60 Query: 53 ----DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 Q V+ G + E G+ STG D AL+G+ +F + + TR G Sbjct: 61 GTNPQQIGLGVSLGSIDNNMETGNLQSTGKMTDVALQGEGFFIVNDGTKNLYTRAGNLSF 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 ++G L ++S V + K N+ + T Y +++ Sbjct: 121 DEEGYLTNSSNGNRVQGWTADEDGTIDKTNAANLEDISLDESMDASATTEAKYKDNLNPT 180 Query: 169 FVR 171 Sbjct: 181 LEE 183 Score = 79.5 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 35/98 (35%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLED 201 + K +A +G+ + G + ++ + + + G LE Sbjct: 457 YDNGYNKALAKIGVATFSNPAGLSKEGDTLFDTSNNSGDPQVGQAGIGGRGMIAPGSLEM 516 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + + +MI + F S + I +++ + + Sbjct: 517 SNVDLARQFTEMITAQRGFQSNSKAISTSDQMLQTLVN 554 >gi|297544701|ref|YP_003677003.1| fagellar hook-basal body protein [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296842476|gb|ADH60992.1| fagellar hook-basal body protein [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 413 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 29/170 (17%), Positives = 58/170 (34%), Gaps = 12/170 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S ++ + + R+ + +N++N +TVG++ ++ F E+ Sbjct: 1 MLRSMYSAVSGLKSHQARMDVIGNNIANVNTVGYKASRMTFKEIFSQTIKGASAPQGNGG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 + Q VA G T D +++G+ +F + + + TR G F Sbjct: 61 GTNPQQIGLGVAIASIDTLFTSGGAQRTDNPTDLSIDGNGFFIVSNGGANLYTRAGNFSF 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158 G LV+ G + M++ + S T Sbjct: 121 DSQGDLVTPDGYKVLGWMSTDGETVNTDTGNLVPISIKNWSSIAPAATTQ 170 Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 33/92 (35%), Gaps = 5/92 (5%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSM 207 ++I + + G + N+ + + T + G LE SN + Sbjct: 319 QIIGQIAIADFQNPMGLEKVGNTMFINTVNSGEPMIGAAGTGTRGSINPGTLEMSNVDLA 378 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E MI + F + +I +++ + + + Sbjct: 379 NEFADMIVTQRGFQANAKIITASDEMLQDLVN 410 >gi|323175233|gb|EFZ60846.1| flagellar basal-body rod protein flgG domain protein [Escherichia coli LT-68] Length = 202 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 30/194 (15%), Positives = 64/194 (32%), Gaps = 7/194 (3%) Query: 53 DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDD 111 S + G+ T D A++G +F + P TRDG F+V + Sbjct: 8 PTLASICLTESHTALHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGSSAYTRDGSFQVDQN 67 Query: 112 GSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170 G LV+A G + + V + + + L + G Sbjct: 68 GQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMNDTGLE 127 Query: 171 RRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225 + + + + + +G++E SN N E+ MI + + + + Sbjct: 128 SIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAYEINSK 187 Query: 226 LIDENEKSMLEAIR 239 + ++ + + + Sbjct: 188 AVSTTDQMLQKLTQ 201 >gi|333008281|gb|EGK27755.1| flagellar basal-body rod protein flgG [Shigella flexneri K-272] gi|333019771|gb|EGK39043.1| flagellar basal-body rod protein flgG [Shigella flexneri K-227] Length = 163 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 31/137 (22%), Positives = 52/137 (37%), Gaps = 14/137 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M +S I A + + +A+N++N T GF+ + F +++ Sbjct: 1 MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+ T D A++G +F + P TRDG F Sbjct: 61 TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGSSAYTRDGSF 120 Query: 107 KVTDDGSLVSASGKYPV 123 +V +G LV+A G Sbjct: 121 QVDQNGQLVTAGGFQVQ 137 >gi|39995527|ref|NP_951478.1| flagellar hook protein FlgE [Geobacter sulfurreducens PCA] gi|39982290|gb|AAR33751.1| flagellar hook protein FlgE [Geobacter sulfurreducens PCA] gi|298504527|gb|ADI83250.1| flagellar hook protein FlgE [Geobacter sulfurreducens KN400] Length = 419 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 35/165 (21%), Positives = 71/165 (43%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 ++ G++ A + +S + +N+SN +T+GF+ ++ FS+V+ + + Q V Sbjct: 5 SALYTGISGLNANGEAMSVIGNNISNVNTIGFKQGRMLFSDVLSSTISGGSQIGRGVQIQ 64 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 GSF ST + D A++GD++F +++ G TR G F D +LV+ G Sbjct: 65 TVENQFTQGSFESTESGTDLAIQGDSFFVVQNTSGRYYTRAGAFSFNKDKTLVNPEGYQV 124 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 + + + + + ++D +Q Sbjct: 125 MGYGIIPSSGLSDGVLKPIDLTNFATTPPKQTSTVKFVVNLDSTQ 169 Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 11/123 (8%), Positives = 34/123 (27%), Gaps = 5/123 (4%) Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 D + + + + + + L + G + + + Sbjct: 294 QTQDGYYQGTLTKVTIDDKGYVNGVYSNGQLQKLYQVALAKFSSTAGLSKAGGTLFEETL 353 Query: 182 PPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + LE SN + + +MI + +++ + I ++ + E Sbjct: 354 ESGQPLFSDASTPGVGKILANSLEQSNVDMAAQFVKMITTQRGYSANSKTITTADEMLQE 413 Query: 237 AIR 239 + Sbjct: 414 VLS 416 >gi|118477204|ref|YP_894355.1| flagellar basal body rod protein FlgG [Bacillus thuringiensis str. Al Hakam] gi|225863630|ref|YP_002749008.1| putative flagellar basal-body rod protein [Bacillus cereus 03BB102] gi|229183964|ref|ZP_04311179.1| Flagellar basal-body rod protein flgG [Bacillus cereus BGSC 6E1] gi|118416429|gb|ABK84848.1| flagellar basal-body rod protein [Bacillus thuringiensis str. Al Hakam] gi|225789416|gb|ACO29633.1| putative flagellar basal-body rod protein [Bacillus cereus 03BB102] gi|228599489|gb|EEK57094.1| Flagellar basal-body rod protein flgG [Bacillus cereus BGSC 6E1] Length = 257 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 44/255 (17%), Positives = 85/255 (33%), Gaps = 15/255 (5%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53 IG + QR++ ++N++N T GF+ + + +I Sbjct: 1 MNGLYIGSMGMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDAYRRGDGAVTNIG 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEG-----DAWFALESPRGIILTRDGRFKV 108 V +++ G+ T + DF L+ ++F LTRDG F + Sbjct: 61 SVDYAVVPAATHVNLVQGNIQMTNSATDFFLDDGASGTTSFFVTSKNDETFLTRDGSFTL 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 D L + SG + + + + IA + +VD Sbjct: 121 NSDRYLQTTSGAFVMGENNERIRIPEGAKVAVQADGTLYDAVTQNNIARLQTKTVDAEAN 180 Query: 169 --FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 ++REN + VK LE+SN + EM ++ + ++ + Sbjct: 181 ARLMQRENKSFTLAEGNIADLPNGTGLVKNHMLENSNVDMTKEMADLMTDQRMISASQRV 240 Query: 227 IDENEKSMLEAIRNI 241 + +K + I Sbjct: 241 MTSFDKIYEKEANEI 255 >gi|77165837|ref|YP_344362.1| hypothetical protein Noc_2374 [Nitrosococcus oceani ATCC 19707] gi|254434880|ref|ZP_05048388.1| flagellar basal-body rod protein FlgF [Nitrosococcus oceani AFC27] gi|76884151|gb|ABA58832.1| Protein of unknown function DUF1078 [Nitrosococcus oceani ATCC 19707] gi|207091213|gb|EDZ68484.1| flagellar basal-body rod protein FlgF [Nitrosococcus oceani AFC27] Length = 246 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 48/246 (19%), Positives = 99/246 (40%), Gaps = 6/246 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + + + N++N +T GF+ +F + + + + Sbjct: 1 MDRMLYVAMTGAQQIMRATAANNHNLANLNTTGFQADLSQFRSM--PVFGEGHPTRVYAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119 + + + G STG ELD ++G+ W A++SP G TR G K+T +G L + +G Sbjct: 59 AERPGVDFTPGPLQSTGRELDVVVQGEGWLAVQSPTGGEAYTRAGNLKITSNGILTTGAG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEI---SQKGKVIATMGLYSVDMSQGFVRRENSG 176 + + + I QK EI G + + V+ +++ G Sbjct: 119 HPVLGEGGIIAIPPAQKIEIGADGTLSIRPLGQAANTLAVLDRIKLVNPPLDQLQKGEDG 178 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + I + V++ G LE SN + + + +MI L +++ T ++ E Sbjct: 179 LITMINGEKAPADALVSLVSGKLESSNVSGVDALVEMIALARQYEMQTKMMKTAEDLDTA 238 Query: 237 AIRNIA 242 + + + Sbjct: 239 SAQMLR 244 >gi|295096224|emb|CBK85314.1| fagellar hook-basal body proteins [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 243 Score = 103 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 49/245 (20%), Positives = 84/245 (34%), Gaps = 15/245 (6%) Query: 9 LAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSK 68 + A + + A N++N T GFR V ++ + V + Sbjct: 1 MGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVTASTPGADM 58 Query: 69 EVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASGKYPVLDMA 127 G T LD AL+ D W A+++ G TR+G +V+ G L +PV+ A Sbjct: 59 TPGQMDYTARPLDVALQQDGWLAVQTADGGEGYTRNGNIQVSATGQL--TIQGHPVMGEA 116 Query: 128 SVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENSGISP---- 179 + G T+ V V+R + G+ Sbjct: 117 GPLTVPEGSELTIAADGTISALNPGDPANTVAPVGRLKLVKAEGNEVQRGDDGMFRLTQA 176 Query: 180 --NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 L+ + V G LE SN + M MI ++F +I +++ +A Sbjct: 177 AQATRGATLQADPTIRVMSGVLEGSNVKPVEAMTDMIASARRFEMQMKIISSVDENAGKA 236 Query: 238 IRNIA 242 + +A Sbjct: 237 NQLLA 241 >gi|225377359|ref|ZP_03754580.1| hypothetical protein ROSEINA2194_03007 [Roseburia inulinivorans DSM 16841] gi|225210784|gb|EEG93138.1| hypothetical protein ROSEINA2194_03007 [Roseburia inulinivorans DSM 16841] Length = 196 Score = 103 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 41/196 (20%), Positives = 80/196 (40%), Gaps = 12/196 (6%) Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-----PRGIILTRDGRFKVTDD 111 V G+ Y + + GS T E D AL G+ +FA+ + TRDG F V + Sbjct: 1 MGVHLGETYTNYDQGSIKVTDNETDVALAGNGFFAIAFTNKAGETSVKYTRDGAFTVNTE 60 Query: 112 GSLVSASGKYPVLDMASVPIQIP-----QKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 G LV+ G Y + + + + E G I Q +++ +G+ D Sbjct: 61 GYLVTKDGDYVLNQAGAQNTDPNARIRLNPNAKITIDELGNIYQNDQLVTRIGVVDFDDY 120 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 + + V++G +E SN N + EM +MI +++ + + + Sbjct: 121 NYISKYGENLYDLVDGGQITASD--AKVQQGCIEGSNVNVVDEMVKMITISRAYQAGQKV 178 Query: 227 IDENEKSMLEAIRNIA 242 I+ ++++ + + + Sbjct: 179 INTVDETLDKTVNQVG 194 >gi|20807880|ref|NP_623051.1| flagellar basal body and hook proteins [Thermoanaerobacter tengcongensis MB4] gi|254478868|ref|ZP_05092232.1| Flagellar basal body protein FlgE [Carboxydibrachium pacificum DSM 12653] gi|20516445|gb|AAM24655.1| Flagellar basal body and hook proteins [Thermoanaerobacter tengcongensis MB4] gi|214035181|gb|EEB75891.1| Flagellar basal body protein FlgE [Carboxydibrachium pacificum DSM 12653] Length = 415 Score = 103 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 30/146 (20%), Positives = 58/146 (39%), Gaps = 12/146 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S ++ A + RL + +N++N +TVG++ ++ F E+ Sbjct: 1 MLRSMYSAISGLQAHQARLDVIGNNIANVNTVGYKASRMTFKEIFSQTIKGASAPQGNGG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 + Q VA G T D +++G+ +F + + I+ TR G F Sbjct: 61 GTNPQQIGLGVAIASIDTLFTRGGAQRTDNPTDLSIDGNGFFIVSNGESILYTRAGNFSF 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIP 134 +G LV+ G + M++ + Sbjct: 121 DSNGDLVTPDGYKVLGWMSTDGKTVN 146 Score = 80.3 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 33/92 (35%), Gaps = 5/92 (5%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS-----GVTVKRGFLEDSNANSM 207 +VI + L G + N+ + + ++ G LE SN N Sbjct: 321 QVIGQIALADFQNPMGLEKVGNTMFINTVNSGEPMIGAAGSGTRGSINPGTLEMSNVNLA 380 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E MI + F + +I +++ + + + Sbjct: 381 NEFVDMITTQRGFQANAKVITVSDEMLQDLVN 412 >gi|148269402|ref|YP_001243862.1| hypothetical protein Tpet_0257 [Thermotoga petrophila RKU-1] gi|147734946|gb|ABQ46286.1| protein of unknown function DUF1078 domain protein [Thermotoga petrophila RKU-1] Length = 623 Score = 103 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 38/207 (18%), Positives = 69/207 (33%), Gaps = 13/207 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G+ + + V +N+SN +TVGF+ +V F ++ Sbjct: 1 MMRSLYSGITGLKNFQVAMDVVGNNISNVNTVGFKASRVNFETMLAQTIKAGRSPQENVG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 + Q GSF +TG + D A++GD +F + TR G F + Sbjct: 61 GTNPMQIGLGSQVSSIDKIMTQGSFQNTGVKTDLAIQGDGFFIVSDGSSYYYTRAGAFTL 120 Query: 109 TDDGSLV-SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 +G+L+ +++G A + ++ N + G + +V Sbjct: 121 DSNGNLIQTSTGYKVQGWTAVQDPETGERYIDTNKPIGDLVISAGMTMPAKKTSNVRFEG 180 Query: 168 GFVRRENSGISPNIPPTPLEDLSGVTV 194 + G V V Sbjct: 181 NLNSKLGPGSFVITLTDENGINHDVRV 207 Score = 83.4 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 18/125 (14%), Positives = 37/125 (29%), Gaps = 6/125 (4%) Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQK-GKVIATMGLYSVDMSQGFVRRENSGISP 179 + + G S V+ + L + G NS Sbjct: 496 NIPWQDGNPMGVLESFAINEQGEIIGTFSNGLTDVLGQIALAVFNNPSGLSEVGNSLYVV 555 Query: 180 NIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 + + + + + G LE SN + E +MI + F + +I ++ + Sbjct: 556 SANSGVPKIGAPGSGGRGILIPGALEMSNVDLAEEFTKMIVAQRGFQANARVITTADQIL 615 Query: 235 LEAIR 239 E + Sbjct: 616 NELVN 620 >gi|224373467|ref|YP_002607839.1| flagellar hook protein FlgE [Nautilia profundicola AmH] gi|223588607|gb|ACM92343.1| flagellar hook protein FlgE [Nautilia profundicola AmH] Length = 853 Score = 103 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 33/203 (16%), Positives = 64/203 (31%), Gaps = 14/203 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G++ A + + A+N++N +TVGF+ + F ++ Sbjct: 1 MMRSLWSGVSGLNAHQIAMDVEANNIANVNTVGFKYSRTNFQNLLSQTVKSATAPQGDLG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF--ALESPRGIILTRDGRF 106 + Q + + GS +T D A+ GD +F + + + TR G F Sbjct: 61 GKNSLQIGLGTSVSAVETMFKQGSIQNTDKNTDMAINGDGFFVVSGDGGKTYRYTRAGDF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 +G+ V +G +A + +++ Sbjct: 121 TFDANGNFVDPNGYIVQGWLADPETHTIDTASGVKPISIPPGLTTPANPTSKIAIKANLN 180 Query: 167 QGFVRRENSGISPNIPPTPLEDL 189 G E G + T + Sbjct: 181 SGDHITEMDGTRTTVDQTADING 203 Score = 71.8 bits (174), Expect = 7e-11, Method: Composition-based stats. Identities = 11/94 (11%), Positives = 36/94 (38%), Gaps = 5/94 (5%) Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNAN 205 + +A + + ++G + + S + +++ LE SN + Sbjct: 757 RSYSLAQVAIAKFVNNEGLMSEGGTLFSASPNSGEPIIGTAGTGGRGSIQPSSLEMSNVD 816 Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + Q+I + + F + + I +++ + ++ Sbjct: 817 LSRSLTQLIVIQRGFQANSKTITTSDQMLNTLLQ 850 >gi|304316900|ref|YP_003852045.1| fagellar hook-basal body protein [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778402|gb|ADL68961.1| fagellar hook-basal body protein [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 420 Score = 103 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 27/146 (18%), Positives = 55/146 (37%), Gaps = 12/146 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S ++ A + + + +N++N +TVGF+ ++ F E+ Sbjct: 1 MLRSMYSAVSGLKAHQAEMDVIGNNIANVNTVGFKASRMTFKEIFNQTIKGASAPQGSGG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 + Q VA G T D +++G+ +F + + + TR G F Sbjct: 61 GTNPQQVGLGVAIASIDTLFTNGGSQRTDNPTDLSIDGNGFFIVNNGGANLYTRAGNFSF 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIP 134 +G LV+ G + ++ + Sbjct: 121 DSNGDLVTPDGYKVMGWISQDGKTVN 146 Score = 79.5 bits (194), Expect = 4e-13, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 38/98 (38%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLED 201 + + +VI + L +QG + N+ + + T+ G LE Sbjct: 320 YSNGRTQVIGQIALADFQNTQGLEKVGNTMFINTVNSGDPMIGAANTGTRGTINPGTLEM 379 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E MI + F + + +I +++ + + + Sbjct: 380 SNVDLANEFANMITTQRGFEANSKVITTSDEILQDLVN 417 >gi|323705438|ref|ZP_08117013.1| fagellar hook-basal body protein [Thermoanaerobacterium xylanolyticum LX-11] gi|323535340|gb|EGB25116.1| fagellar hook-basal body protein [Thermoanaerobacterium xylanolyticum LX-11] Length = 424 Score = 103 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 27/146 (18%), Positives = 55/146 (37%), Gaps = 12/146 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S ++ A + + + +N++N +TVGF+ ++ F E+ Sbjct: 1 MLRSMYSAVSGLKANQAEMDVIGNNIANVNTVGFKASRMTFKEIFNQTIKGASAPQDNGG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 + Q VA G T D +++G+ +F + + + TR G F Sbjct: 61 GTNPQQIGLGVAIASIDTLFSNGGSQRTDNPTDLSIDGNGFFIVNNGGANLYTRAGNFSF 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIP 134 +G LV+ G + ++ + Sbjct: 121 DSNGDLVTPDGYKVMGWISQDGKTVN 146 Score = 78.8 bits (192), Expect = 6e-13, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 38/101 (37%), Gaps = 5/101 (4%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLED 201 + + +VI + L +QG + N+ + + T+ G LE Sbjct: 324 YSNGRTQVIGQIALADFQNTQGLEKVGNTMFINTVNSGDPMIGAANTGTRGTIDPGTLEM 383 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 SN + E MI + F + +I +++ + + + I Sbjct: 384 SNVDLANEFANMITTQRGFEANAKVITTSDEILQDLVNLIR 424 >gi|47565441|ref|ZP_00236482.1| flagellar basal-body rod protein flgF, putative [Bacillus cereus G9241] gi|47557431|gb|EAL15758.1| flagellar basal-body rod protein flgF, putative [Bacillus cereus G9241] Length = 257 Score = 103 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 45/255 (17%), Positives = 83/255 (32%), Gaps = 15/255 (5%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53 IG + QR++ ++N++N T GF+ + + +I Sbjct: 1 MNGLYIGSMGMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIG 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDF-----ALEGDAWFALESPRGIILTRDGRFKV 108 V +++ G+ T + DF A ++F LTRDG F + Sbjct: 61 SVDYAVVPAATHVNLVQGNIQMTNSATDFFLDDGAAGTTSFFVTSKNDETFLTRDGSFTI 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 D L ++SG Y + IA + +VD Sbjct: 121 NSDRYLQTSSGAYVMDVNNERVRIPEGAKIAVQADGTLYDEGTQNNIARLQTKTVDAEAN 180 Query: 169 --FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 ++REN + VK LE+SN + EM ++ + ++ + Sbjct: 181 ARLMQRENKSFTLAEGNIADLPNGTGLVKNHMLENSNVDMTKEMADLMTDQRMISASQRV 240 Query: 227 IDENEKSMLEAIRNI 241 + +K + I Sbjct: 241 MTSFDKIYEKEANEI 255 >gi|229160734|ref|ZP_04288726.1| Flagellar basal-body rod protein flgG [Bacillus cereus R309803] gi|228622749|gb|EEK79583.1| Flagellar basal-body rod protein flgG [Bacillus cereus R309803] Length = 257 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 46/255 (18%), Positives = 84/255 (32%), Gaps = 15/255 (5%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53 IG + QR++ ++N++N T GF+ + + +I Sbjct: 1 MNGLYIGSMGMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIG 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDF-----ALEGDAWFALESPRGIILTRDGRFKV 108 V +++ G+ T + DF A ++F LTRDG F V Sbjct: 61 SVDYAVVPAATHVNLVQGNIQMTNSATDFFLDDGAAGTTSFFVTSKNDETFLTRDGSFTV 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM--S 166 D L ++SG + + + IA + +VD + Sbjct: 121 NSDRYLQTSSGAFVMGENNERIRIPEGVKVAVQADGTLYDEITQNNIARLQTKTVDAETN 180 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 V+REN + VK LE+SN + EM ++ + + + Sbjct: 181 NRLVQRENKSFTLAEGNIADLPNGTGIVKNHMLENSNVDMTKEMADLMASQKMIQASQRI 240 Query: 227 IDENEKSMLEAIRNI 241 + +K + I Sbjct: 241 MTSFDKIYEKEANEI 255 >gi|324325790|gb|ADY21050.1| flagellar basal body rod protein FlgG [Bacillus thuringiensis serovar finitimus YBT-020] Length = 257 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 45/255 (17%), Positives = 83/255 (32%), Gaps = 15/255 (5%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53 IG + QR++ ++N++N T GF+ + + +I Sbjct: 1 MNGLYIGSMGMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIG 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDF-----ALEGDAWFALESPRGIILTRDGRFKV 108 V +++ G+ T + DF A ++F LTRDG F + Sbjct: 61 SVDYAVVPAATHVNLVQGNIQMTNSATDFFLDDGANGTTSFFVTSKNDETFLTRDGSFTI 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 D L ++SG Y + IA + +VD Sbjct: 121 NSDRYLQTSSGAYVMDVNNERVRIPEGAKIAVQADGTLYDEGTQNNIARLQTKTVDAEAN 180 Query: 169 --FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 ++REN + VK LE+SN + EM ++ + ++ + Sbjct: 181 SRLMQRENKSFTLAEGNIADLPNGTGLVKNHMLENSNVDMTKEMADLMTDQRMISASQRV 240 Query: 227 IDENEKSMLEAIRNI 241 + +K + I Sbjct: 241 MTSFDKIYEKEANEI 255 >gi|123442782|ref|YP_001006759.1| flagellar basal-body rod protein FlgG [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122089743|emb|CAL12596.1| flagellar basal-body rod protein FlgG [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 217 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 31/193 (16%), Positives = 67/193 (34%), Gaps = 7/193 (3%) Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDG 112 Q + V G+ T D A++G+ +F ++ P G TRDG F+ +G Sbjct: 24 QIGTGVRPVATERLHSQGNLSKTDNTKDVAIKGEGFFQVQMPDGTNAYTRDGSFQTDQNG 83 Query: 113 SLVSASGKYPVLDMASVPIQI-PQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171 LV++ G + + V + + + L + + G Sbjct: 84 QLVTSGGFQIQPAITIPANAMSMTVGRDGIVSVTLPGQTATQQVGQLTLATFINNSGLES 143 Query: 172 RENSGISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 + + G + +G++E SN N E+ MI + + + Sbjct: 144 VGENLYQETASSGAPNETTPGLNGGGLLYQGYVETSNVNVAEELVNMIQTQRAYEINSKA 203 Query: 227 IDENEKSMLEAIR 239 + +++ + + + Sbjct: 204 VSTSDQMLQKLTQ 216 >gi|52143687|ref|YP_083142.1| flagellar basal body rod protein FlgG [Bacillus cereus E33L] gi|51977156|gb|AAU18706.1| flagellar basal-body rod protein [Bacillus cereus E33L] Length = 257 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 44/255 (17%), Positives = 85/255 (33%), Gaps = 15/255 (5%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53 IG + QR++ ++N++N T GF+ + + +I Sbjct: 1 MNGLYIGSMGMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIG 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDA-----WFALESPRGIILTRDGRFKV 108 V +++ G+ T + DF L+ +F LTRDG F + Sbjct: 61 SVDYAVVPAATHVNLVQGNIQMTNSATDFFLDDGTAGTASFFVTSKNNETFLTRDGSFTL 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV--DMS 166 D L + SG + + + + IA + +V + + Sbjct: 121 NSDRYLQTTSGAFVMGENNERIRIPEGAKVAVQADGTLYDAVTQNNIARLQTKTVGAEAN 180 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 V+REN + VK LE+SN + EM ++ + ++ + Sbjct: 181 NRLVQRENKSFTLAEGNIDDLPNGTGLVKNHMLENSNVDMTKEMADLMTDQRMISASQRV 240 Query: 227 IDENEKSMLEAIRNI 241 + +K + I Sbjct: 241 MTSFDKIYEKEANEI 255 >gi|229144385|ref|ZP_04272790.1| Flagellar basal-body rod protein flgG [Bacillus cereus BDRD-ST24] gi|228639016|gb|EEK95441.1| Flagellar basal-body rod protein flgG [Bacillus cereus BDRD-ST24] Length = 257 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 44/255 (17%), Positives = 82/255 (32%), Gaps = 15/255 (5%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53 IG + QR++ ++N++N T GF+ + + +I Sbjct: 1 MNGLYIGSMGMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIG 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDF-----ALEGDAWFALESPRGIILTRDGRFKV 108 V +++ G+ T + DF A ++F LTRDG F + Sbjct: 61 SVDYAVVPAATHVNLVQGNIQMTNSATDFFLDDGAAGTTSFFVTSKNDETFLTRDGSFTL 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 D L ++SG + + + I + +VD Sbjct: 121 NSDRYLQTSSGAFVMGENNERIRIPEGAKVAVQADGTLYDEVTQNNIGRLQTKTVDAETN 180 Query: 169 --FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 V+REN + VK LE+SN + EM ++ + + + Sbjct: 181 ARLVQRENKSFTLAEGNIANLPNGTGIVKNHMLENSNVDMTKEMADLMTDQKMIQASQRV 240 Query: 227 IDENEKSMLEAIRNI 241 + +K + I Sbjct: 241 MTSFDKIYEKEANEI 255 >gi|326939385|gb|AEA15281.1| flagellar basal body rod protein FlgG [Bacillus thuringiensis serovar chinensis CT-43] Length = 257 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 45/255 (17%), Positives = 83/255 (32%), Gaps = 15/255 (5%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53 IG + QR++ ++N++N T GF+ + + +I Sbjct: 1 MNGLYIGSMGMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGVVTNIG 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDF-----ALEGDAWFALESPRGIILTRDGRFKV 108 V +++ G+ T + DF A ++F LTRDG F + Sbjct: 61 SVDYAVVPAATHVNLVQGNIQMTNSATDFFLDDGAAGTTSFFVTSKNDETFLTRDGSFTL 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 D L ++SG + + + IA + +VD Sbjct: 121 NSDRYLQTSSGAFVMGENNERIRIPEGAKVAVQADGTLYDEITQNNIARLQTKTVDAETN 180 Query: 169 --FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 V+REN + VK LE+SN + EM ++ + + + Sbjct: 181 ARLVQRENKSFTLAEGNIANLPNGTGIVKNHMLENSNVDMTKEMADLMTDQKMIQASQRV 240 Query: 227 IDENEKSMLEAIRNI 241 + +K + I Sbjct: 241 MTSFDKIYEKEANEI 255 >gi|229069323|ref|ZP_04202613.1| Flagellar basal-body rod protein flgG [Bacillus cereus F65185] gi|229078954|ref|ZP_04211506.1| Flagellar basal-body rod protein flgG [Bacillus cereus Rock4-2] gi|228704368|gb|EEL56802.1| Flagellar basal-body rod protein flgG [Bacillus cereus Rock4-2] gi|228713810|gb|EEL65695.1| Flagellar basal-body rod protein flgG [Bacillus cereus F65185] Length = 257 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 44/255 (17%), Positives = 82/255 (32%), Gaps = 15/255 (5%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53 IG + QR++ ++N++N T GF+ + + +I Sbjct: 1 MNGLYIGSMGMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIG 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDF-----ALEGDAWFALESPRGIILTRDGRFKV 108 V +++ G+ T + DF A ++F LTRDG F + Sbjct: 61 SVDYAVVPAATHVNLVQGNIQMTNSATDFFLDDGAAGTTSFFVTSKNDETFLTRDGSFTL 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 D L ++SG + + + I + +VD Sbjct: 121 NSDRYLQTSSGAFVMGENNERIRIPEGAKVAVQADGTLYDEVTQNNIGRLQTKTVDAETN 180 Query: 169 --FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 V+REN + VK LE+SN + EM ++ + + + Sbjct: 181 ARLVQRENKSFTLAEGNVANLPNGTGIVKNHMLENSNVDMTKEMADLMTDQKMIQASQRV 240 Query: 227 IDENEKSMLEAIRNI 241 + +K + I Sbjct: 241 MTSFDKIYEKEANEI 255 >gi|188586026|ref|YP_001917571.1| protein of unknown function DUF1078 domain protein [Natranaerobius thermophilus JW/NM-WN-LF] gi|179350713|gb|ACB84983.1| protein of unknown function DUF1078 domain protein [Natranaerobius thermophilus JW/NM-WN-LF] Length = 508 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 43/187 (22%), Positives = 68/187 (36%), Gaps = 15/187 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49 M S G++ + RL T+ +N++N +T GF+ +V F + Sbjct: 1 MLRSMYSGVSGLRNHQTRLDTIGNNVANVNTAGFKGDRVTFQDAFNQTLEAASAPNERGG 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109 + Q + G GS +TG + D A+EGD +F + + + TR G F V Sbjct: 61 TNPQQVGLGMNIGSMDTIHTQGSLENTGRDTDLAIEGDGFFVVNDGQSDMFTRVGNFGVD 120 Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169 +G+LVS Y V DEI G V+ +V + Sbjct: 121 SEGNLVSQGTGYKVQG----YAYDEDADEINTDEIVDMEIPLGDVVDPEATENVKYNGNL 176 Query: 170 VRRENSG 176 G Sbjct: 177 NSNTEPG 183 Score = 80.3 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 13/98 (13%), Positives = 30/98 (30%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLED 201 + + + + + L G + + P + G LE Sbjct: 408 YTNGETRQLGQVVLSDFTNPGGLEKLGSGLYQPTRNSGEPSYGIAGTGGRGEIAPGALEM 467 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + + MI + F + + I ++ + E + Sbjct: 468 SNVDMGEQFTDMIVTQRGFQANSRSITTGDEVLQELVN 505 >gi|89895710|ref|YP_519197.1| hypothetical protein DSY2964 [Desulfitobacterium hafniense Y51] gi|89335158|dbj|BAE84753.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 383 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 33/207 (15%), Positives = 69/207 (33%), Gaps = 13/207 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S ++ + ++ + +N++N +T GF+ +V FS ++ Sbjct: 1 MLRSLYSAISGLKNHQIKMDVIGNNIANVNTTGFKRSRVTFSTMLSQTMKGAGSPSANQG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 Q GS STG + D ++G +F L++ + +R G F Sbjct: 61 GTNPAQIGLGSMVSSIDQIMTPGSSQSTGKDTDMMIQGKGFFVLQNNGETVYSRAGAFTQ 120 Query: 109 TDDGSLV-SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 DDG+L +G + M + + K + + + +G + Sbjct: 121 DDDGTLTEPGTGAKVMGHMYGMEKSVDTMSTTTEDESKIDWTTLEAIKFNLGENPPYVLS 180 Query: 168 GFVRRENSGISPNIPPTPLEDLSGVTV 194 + + + S + V Sbjct: 181 EATKIPPDAWVKSGDEWVYSNPSLIGV 207 Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 32/92 (34%), Gaps = 5/92 (5%) Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS-----GVTVKRGFLEDSNANS 206 +VI + + S G + NS + + + +E SN + Sbjct: 287 SRVIGQVAIASFSNDAGLLNLGNSFYAASNNSGQASIGGAGEDGRGNIVPSTVEMSNVDL 346 Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 E MI + F + + +I ++ + E I Sbjct: 347 SQEFTDMIVTQRGFQANSRVITVSDSLLQELI 378 >gi|206970637|ref|ZP_03231589.1| putative flagellar basal-body rod protein [Bacillus cereus AH1134] gi|206734273|gb|EDZ51443.1| putative flagellar basal-body rod protein [Bacillus cereus AH1134] Length = 257 Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats. Identities = 44/255 (17%), Positives = 82/255 (32%), Gaps = 15/255 (5%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53 IG + QR++ ++N++N T GF+ + + +I Sbjct: 1 MNGLYIGSMGMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIG 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDF-----ALEGDAWFALESPRGIILTRDGRFKV 108 V +++ G+ T + DF A ++F LTRDG F + Sbjct: 61 SVDYAVVPAATHVNLVQGNIQMTNSATDFFLDDGAAGTTSFFVTSKNDETFLTRDGSFTL 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 D L ++SG + + + I + +VD Sbjct: 121 NSDRYLQTSSGAFVMGENNERIRIPEGAKVAVQADGTLYDEATQNNIGRLQTKTVDAETN 180 Query: 169 --FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 V+REN + VK LE+SN + EM ++ + + + Sbjct: 181 ARLVQRENKSFTLAEGNIANLPNGTGIVKNHMLENSNVDMTKEMADLMTDQKMIQASQRV 240 Query: 227 IDENEKSMLEAIRNI 241 + +K + I Sbjct: 241 MTSFDKIYEKEANEI 255 >gi|30019815|ref|NP_831446.1| flagellar basal body rod protein FlgG [Bacillus cereus ATCC 14579] gi|218235496|ref|YP_002366457.1| flagellar basal body rod protein FlgG [Bacillus cereus B4264] gi|218896706|ref|YP_002445117.1| putative flagellar basal-body rod protein [Bacillus cereus G9842] gi|228907405|ref|ZP_04071263.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis IBL 200] gi|228952155|ref|ZP_04114247.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228958053|ref|ZP_04119788.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis serovar pakistani str. T13001] gi|229043528|ref|ZP_04191237.1| Flagellar basal-body rod protein flgG [Bacillus cereus AH676] gi|229109228|ref|ZP_04238827.1| Flagellar basal-body rod protein flgG [Bacillus cereus Rock1-15] gi|229127099|ref|ZP_04256096.1| Flagellar basal-body rod protein flgG [Bacillus cereus BDRD-Cer4] gi|229149977|ref|ZP_04278203.1| Flagellar basal-body rod protein flgG [Bacillus cereus m1550] gi|29895360|gb|AAP08647.1| Flagellar basal-body rod protein flgG [Bacillus cereus ATCC 14579] gi|218163453|gb|ACK63445.1| putative flagellar basal-body rod protein [Bacillus cereus B4264] gi|218540813|gb|ACK93207.1| putative flagellar basal-body rod protein [Bacillus cereus G9842] gi|228633499|gb|EEK90102.1| Flagellar basal-body rod protein flgG [Bacillus cereus m1550] gi|228656215|gb|EEL12056.1| Flagellar basal-body rod protein flgG [Bacillus cereus BDRD-Cer4] gi|228674238|gb|EEL29483.1| Flagellar basal-body rod protein flgG [Bacillus cereus Rock1-15] gi|228725750|gb|EEL76998.1| Flagellar basal-body rod protein flgG [Bacillus cereus AH676] gi|228801570|gb|EEM48452.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis serovar pakistani str. T13001] gi|228807509|gb|EEM54036.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228852266|gb|EEM97062.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis IBL 200] Length = 257 Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 45/255 (17%), Positives = 83/255 (32%), Gaps = 15/255 (5%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53 IG + QR++ ++N++N T GF+ + + +I Sbjct: 1 MNGLYIGSMGMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIG 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDF-----ALEGDAWFALESPRGIILTRDGRFKV 108 V +++ G+ T + DF A ++F LTRDG F + Sbjct: 61 SVDYAVVPAATHVNLVQGNIQMTNSATDFFLDDGAAGTTSFFVTSKNDETFLTRDGSFTL 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 D L ++SG + + + IA + +VD Sbjct: 121 NSDRYLQTSSGAFVMGENNERIRIPEGAKVAVQADGTLYDEVTQNNIARLQTKTVDAETN 180 Query: 169 --FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 V+REN + VK LE+SN + EM ++ + + + Sbjct: 181 ARLVQRENKSFTLAEGNIANLPNGTGIVKNHMLENSNVDMTKEMADLMTDQKMIQASQRV 240 Query: 227 IDENEKSMLEAIRNI 241 + +K + I Sbjct: 241 MTSFDKIYEKEANEI 255 >gi|296274029|ref|YP_003656660.1| fagellar hook-basal body protein [Arcobacter nitrofigilis DSM 7299] gi|296098203|gb|ADG94153.1| fagellar hook-basal body protein [Arcobacter nitrofigilis DSM 7299] Length = 241 Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 47/254 (18%), Positives = 91/254 (35%), Gaps = 27/254 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDIDQKIS 57 M AA + R+ TV++N++N+ T+GF+ + F+ + + + Sbjct: 1 MNQGMYPLAAAMVNQINRVDTVSNNLANSRTIGFKQENLAEGTFNNYLLKANLEGKKPEY 60 Query: 58 -------FVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL--ESPRGIILTRDGRFKV 108 ++++ G + TG LDFAL+ F + + T+DG FK Sbjct: 61 INELTNKVPKIDQKFIDSSQGPIVQTGNNLDFALKEPQTFFAVLDQNGNVQYTKDGSFK- 119 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 DG LV ++G + + + + + I L + Sbjct: 120 NSDGFLVDSNGNNVLSGDGEPIA----------IEDGFKQAIGVFNIDYKNLEKFGDNNY 169 Query: 169 FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228 ++ E E+ + + +G LE SN NS+ M Q+I + + I Sbjct: 170 KLKDE----QQVAVQVQAEENNENFILQGSLEQSNVNSVMAMVQLIEAQRSYEQAQKGIT 225 Query: 229 ENEKSMLEAIRNIA 242 + I+ + Sbjct: 226 GIDSMNKTIIQKLG 239 >gi|170288059|ref|YP_001738297.1| hypothetical protein TRQ2_0255 [Thermotoga sp. RQ2] gi|170175562|gb|ACB08614.1| protein of unknown function DUF1078 domain protein [Thermotoga sp. RQ2] Length = 750 Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 38/207 (18%), Positives = 68/207 (32%), Gaps = 13/207 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G+ + + V +N+SN +TVGF+ +V F ++ Sbjct: 1 MMRSLYSGITGLKNFQVAMDVVGNNISNVNTVGFKASRVNFETMLAQTIKAGRSSQENVG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 + Q GSF +TG + D A++GD +F + TR G F + Sbjct: 61 GTNPMQIGLGSQVSSIDKIMTQGSFQNTGVKTDLAIQGDGFFIVSDGNAYYYTRAGAFTL 120 Query: 109 TDDGSLV-SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 +G+L+ +++G A + ++ N + G + +V Sbjct: 121 DSNGNLIQTSTGYKVQGWTAVQDPETGERYIDTNRPIGDLVISAGMTMPAKKTSNVRFEG 180 Query: 168 GFVRRENSGISPNIPPTPLEDLSGVTV 194 G V V Sbjct: 181 NLNSNVGPGSFTITLTDDSGVDHDVRV 207 Score = 81.8 bits (200), Expect = 7e-14, Method: Composition-based stats. Identities = 18/125 (14%), Positives = 37/125 (29%), Gaps = 6/125 (4%) Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQK-GKVIATMGLYSVDMSQGFVRRENSGISP 179 + + G S V+ + L + G NS Sbjct: 623 NIPWQDGNPMGVLESFAINEQGEIIGTFSNGLTDVLGQIALAVFNNPSGLSEVGNSLYVV 682 Query: 180 NIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 + + + + + G LE SN + E +MI + F + +I ++ + Sbjct: 683 SANSGVPKIGAPGSGGRGILIPGALEMSNVDLAEEFTKMIVAQRGFQANARVITTADQIL 742 Query: 235 LEAIR 239 E + Sbjct: 743 NELVN 747 >gi|23100411|ref|NP_693878.1| flagellar hook-basal body protein [Oceanobacillus iheyensis HTE831] gi|22778644|dbj|BAC14912.1| flagellar hook-basal body protein [Oceanobacillus iheyensis HTE831] Length = 276 Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 44/277 (15%), Positives = 88/277 (31%), Gaps = 35/277 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M L+ +L + +NM+N+ T G+++ + +FS ++ N++ Sbjct: 1 MSQMMIQAAVTMNQLQNKLDLIGNNMANSQTTGYKSRQAEFSSLLTQQVNNLTDPANAQG 60 Query: 56 ---------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL-----ESPRGIILT 101 S G ++ G+ T +LD AL + G T Sbjct: 61 RLTPDGIRVGSGSRLGSTNMNLNQGAIQETNRDLDVALTSENLLFQVEVTENGQVGTRYT 120 Query: 102 RDGRFKVTDD---GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158 RDG F ++ ++S S PV+ + D I + ++ A Sbjct: 121 RDGSFYLSPMENGQMMLSTSDGNPVIGNNGPILIQDGFDSIEINEYGQLLVERNGQQAIE 180 Query: 159 GLYSV------------DMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANS 206 SV + + + + ++ LE SN + Sbjct: 181 DQLSVVEAIRPRLLESTGQNLFQLPNLEALGFNAEEIIQETNPQTAILQSKALEQSNVDI 240 Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 EM ++ + + + I ++ M + I S Sbjct: 241 SKEMSDLLMTQRLYQFNSRTITMGDQMMG-LVNQIRS 276 >gi|2494530|sp|Q56326|FLGE_TREPH RecName: Full=Flagellar hook protein flgE gi|439981|gb|AAA73467.1| flagellar hook polypeptide [Treponema phagedenis] Length = 463 Score = 102 bits (253), Expect = 6e-20, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 55/139 (39%), Gaps = 12/139 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S G++ + R+ + +N++N +T GF+ +V F +++ + + Sbjct: 1 MMRSLFSGVSGMQNHQTRMDVIGNNVANVNTTGFKRGRVNFQDLISQQLSGASRPNEEVG 60 Query: 56 -------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 V G+ +TG D A++G+ +F L+ T G F V Sbjct: 61 GVNPKEVGLGVMVASIDTVHTQGALQTTGINTDIAIQGNGFFILKDGEKSFYTTAGAFGV 120 Query: 109 TDDGSLVSASGKYPVLDMA 127 DG+LV+ + V Sbjct: 121 DRDGTLVNPANGMRVQGWM 139 Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 20/162 (12%), Positives = 43/162 (26%), Gaps = 5/162 (3%) Query: 83 ALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNV 142 A + I L G + T ++ K D ++ K + + Sbjct: 299 ANPDEGGAPTRHTFNINLGEIGTSRNTITQFAERSTTKAYQQDGYAMGYLENFKIDQSGI 358 Query: 143 GEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRG 197 + + I + L G + + + + G Sbjct: 359 ITGVYSNGASREIGQLALAGFANQGGLEKAGENTYIQSNNSGIANITVSGVMGKGKLIAG 418 Query: 198 FLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 LE SN + + MI + F + I ++ + + Sbjct: 419 TLEMSNVDLTDQFTDMIITQRGFQAGAKTIQTSDTMLETVLN 460 >gi|149195335|ref|ZP_01872422.1| flagellar hook protein E [Caminibacter mediatlanticus TB-2] gi|149134527|gb|EDM23016.1| flagellar hook protein E [Caminibacter mediatlanticus TB-2] Length = 869 Score = 102 bits (253), Expect = 6e-20, Method: Composition-based stats. Identities = 33/203 (16%), Positives = 62/203 (30%), Gaps = 14/203 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G++ A + + A+N++N +TVGF+ + F ++ Sbjct: 1 MMRSLWSGVSGLNAHQIAMDVEANNIANVNTVGFKYSRTNFQNLLSQTIKSATAPQGDLG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF--ALESPRGIILTRDGRF 106 + Q + GS +T D A+ GD +F + + + TR G F Sbjct: 61 GKNSLQVGLGATVSSVETMFKQGSIQNTDKNTDMAINGDGFFVVSSDGGKTYRYTRAGDF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 G+ V +G +A + +++ Sbjct: 121 TFDAQGNFVDPNGYIVQGWLADPDTHNIDTATGLKPISIPPGLTTPANPTSKISIKANLN 180 Query: 167 QGFVRRENSGISPNIPPTPLEDL 189 G E P + T + Sbjct: 181 SGDHIIEKGAARPTVDQTADMNG 203 Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 11/94 (11%), Positives = 37/94 (39%), Gaps = 5/94 (5%) Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGI-SPNIPPTPLE----DLSGVTVKRGFLEDSNAN 205 + +A + + ++G + + + P+ +++ LE SN + Sbjct: 773 RSYSLAQVAIAKFVNNEGLMNEGGTLFSASPNSGDPIVGTAGTGGRGSIQPSALEMSNVD 832 Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + Q+I + + F + + I +++ + ++ Sbjct: 833 LSRSLTQLIVIQRGFQANSKTITTSDQMLNTLLQ 866 >gi|15606898|ref|NP_214279.1| flagellar hook protein FlgE [Aquifex aeolicus VF5] gi|6225343|sp|O67711|FLGE_AQUAE RecName: Full=Flagellar hook protein flgE gi|2984140|gb|AAC07675.1| flagellar hook protein FlgE [Aquifex aeolicus VF5] Length = 482 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 41/202 (20%), Positives = 72/202 (35%), Gaps = 16/202 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M SF + L +DN++N +TVGF+ + F ++V + ++ Sbjct: 1 MLRSFYNAITGMDVSRFALDVTSDNLANANTVGFKKSRPIFQDMVSQVVVGLNTTTGTVK 60 Query: 54 --QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRFKVT 109 + +GSF T D A+EG A F L TRDGRF++ Sbjct: 61 TTTFGAGAVVDSTQKVWTIGSFKQTEITTDLAIEGKALFILRDVLTNQTYYTRDGRFRIN 120 Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169 +G L++ +G Y + ++ ++ + +I K G + Sbjct: 121 REGYLINPNGLYVQGFKVNPVTGEVTGTQLEDIRVETQIPPK-----ATGEIYFNPPTNL 175 Query: 170 VRRENSGISPNIPPTPLEDLSG 191 R P PL+ + Sbjct: 176 DERAPIIDQTTTPFNPLDSFTY 197 Score = 61.4 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 14/122 (11%), Positives = 34/122 (27%), Gaps = 4/122 (3%) Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162 + +V+ + + + V GE + L Sbjct: 363 NSYITQHAADFVVTMDQDGYARGELIDLYVLSEDGVVVGVYSNGE----TLPTYRLALAQ 418 Query: 163 VDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222 + V++ ++ + PT L ++ +E SN + E +I + + Sbjct: 419 FTDPEELVKKGSNLYASVKTPTILLPGGSNKIRSAVVEMSNVDIAKEFINLITAQRTYQV 478 Query: 223 IT 224 Sbjct: 479 TQ 480 >gi|229029452|ref|ZP_04185535.1| Flagellar basal-body rod protein flgG [Bacillus cereus AH1271] gi|228731911|gb|EEL82810.1| Flagellar basal-body rod protein flgG [Bacillus cereus AH1271] Length = 257 Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats. Identities = 45/255 (17%), Positives = 85/255 (33%), Gaps = 15/255 (5%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53 IG + QR++ ++N++N T GF+ + + +I Sbjct: 1 MNGLYIGSMGMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIG 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEG-----DAWFALESPRGIILTRDGRFKV 108 V +++ G+ T + DF L+ ++F LTRDG F + Sbjct: 61 STDYAVVPAATHVNLVQGNIQMTNSATDFFLDDGAAGISSFFVTSKNDETFLTRDGSFTL 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 D L ++SG + + + IA + +VD Sbjct: 121 NSDRYLQTSSGAFVMGENNERIRIPEGAKVAVQADGTLYDEVTQNNIARLQTKTVDTETN 180 Query: 169 --FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 V+REN + VK LE+SN + EM ++ + ++ + Sbjct: 181 ARLVQRENKSFALAEGNIADLPNGTGLVKNHMLENSNVDMTKEMADLMTDQKMISASQRI 240 Query: 227 IDENEKSMLEAIRNI 241 + +K + I Sbjct: 241 MTSFDKIYEKEANEI 255 >gi|182412238|ref|YP_001817304.1| hypothetical protein Oter_0414 [Opitutus terrae PB90-1] gi|177839452|gb|ACB73704.1| protein of unknown function DUF1078 [Opitutus terrae PB90-1] Length = 312 Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats. Identities = 40/302 (13%), Positives = 82/302 (27%), Gaps = 67/302 (22%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------QKISF 58 G++A + L + N++N +T +++ + + Q + Sbjct: 7 LTSGVSAVRTFSKGLEVIGSNIANVNTTAYKSSSATYGDTFSNTLRAATATDSAVQIGTG 66 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSA 117 V + G ++TG D + G +F ++ G TRDG F G L + Sbjct: 67 VQVAGISTNFTQGPLVATGNNNDLGISGRGYFVVQDATGNQFATRDGSFHFDTGGYLKNV 126 Query: 118 SGKYPVLDMASVPI----------------------------------QIPQKDEIFNVG 143 G + DM I Sbjct: 127 QGYNVLNDMGQPVQVSGLKKTYDATGVHDGYEPAPYSELASVSIGSDGTITAYATDGTSV 186 Query: 144 EKGEISQKGKVIATMGLYSVDMSQG-------------------FVRRENSGISPNIPPT 184 G V +R+ N+ + + + Sbjct: 187 LYGRTYDLADTSVPPAPDPVLDPANPAVNPTRSIGVMSVSDESRLMRQANNLYNFSATGS 246 Query: 185 PLED-------LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + D ++ G LE SN + + +I + F + + LI ++ + + Sbjct: 247 TVADNMEVPGVNGTGKIQTGVLEQSNVDLTDQFSNLITTQRSFQAGSRLITVSDSVLEDI 306 Query: 238 IR 239 + Sbjct: 307 VN 308 >gi|1196326|gb|AAB51418.1| flagellar hook protein [Borrelia burgdorferi] Length = 372 Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 55/139 (39%), Gaps = 12/139 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ + R+ V +N++N +T+GF+ +V F +++ + Sbjct: 1 MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIGFKKGRVNFQDMISQSISGASRPTDARG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 Q + G+F ST D + G+ +F L+ + + TR G F V Sbjct: 61 GTNPKQVGLGMNVASIDTIHTQGAFQSTQKASDLGVSGNGFFILKEGKNLFYTRAGAFDV 120 Query: 109 TDDGSLVSASGKYPVLDMA 127 D LV+ + + Sbjct: 121 DSDRHLVNPANGMRIQGWM 139 >gi|24215548|ref|NP_713029.1| flagellar hook protein FlgE [Leptospira interrogans serovar Lai str. 56601] gi|45657072|ref|YP_001158.1| flagellar hook protein FlgE [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|24196693|gb|AAN50047.1| flagellar hook protein FlgE [Leptospira interrogans serovar Lai str. 56601] gi|45600309|gb|AAS69795.1| FlgE [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 464 Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 68/213 (31%), Gaps = 14/213 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-------- 52 M S G++ + R+ + +N+SN +T GF+T +V F +++ Sbjct: 1 MMRSLYSGVSGLKNHQVRMDVIGNNISNVNTHGFKTERVTFQDMISQELRGASEPKENIG 60 Query: 53 ----DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 Q GS +TG D A+ G+ +F ++ TR G F + Sbjct: 61 GVNPQQVGLGSLIAAIDKIMTQGSLQTTGKNTDVAISGEGFFIVKDGDKQFYTRAGAFNL 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 +G V+ + V S K + I +D Sbjct: 121 DKNGYYVNPANGLKVQGWNSRLDDKGNKYINSAASIEDIIIPVYSKEPARATSQIDFKSN 180 Query: 169 FVRRENSGI--SPNIPPTPLEDLSGVTVKRGFL 199 + + T + + ++RG + Sbjct: 181 LNSSAPAVPPDATQEEITAMINDPDPKMRRGHV 213 Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 14/122 (11%), Positives = 38/122 (31%), Gaps = 5/122 (4%) Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 D ++ + + + +A + + G + ++ S ++ Sbjct: 339 VKQDGYTMGYLESFSIDNSGTITGVFSNGVRQPLARVATAVFNNPAGLDKAGDTMFSYSM 398 Query: 182 PPTPLEDLS-----GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + G LE SN + + MI + F + + I +++ + E Sbjct: 399 NSGEPNIGEAGVQGRGKINAGLLEMSNVDLSDQFTDMIVTQRGFQANSRTITTSDQMIQE 458 Query: 237 AI 238 + Sbjct: 459 VL 460 >gi|119503644|ref|ZP_01625727.1| flagellar hook protein [marine gamma proteobacterium HTCC2080] gi|119460706|gb|EAW41798.1| flagellar hook protein [marine gamma proteobacterium HTCC2080] Length = 410 Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats. Identities = 32/130 (24%), Positives = 59/130 (45%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A + L +++N++N TVGF+ + +F+E+ + + V + Sbjct: 2 AFSTAISGIKAAQANLDVISNNIANASTVGFKASRAQFAEIYASSVSGGSNAGQGVELTE 61 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPV 123 GS TG+ LD A+ G+ +F + + TR G F+V DG L + SG Sbjct: 62 IRAEFSQGSLDFTGSGLDLAISGNGFFIVSNAGASEYTRAGSFQVDRDGFLTNESGNRLQ 121 Query: 124 LDMASVPIQI 133 + I Sbjct: 122 GYQGNTDGVI 131 Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 14/125 (11%), Positives = 36/125 (28%), Gaps = 5/125 (4%) Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 + D I + + + + + I + L S + G S Sbjct: 284 NSAIQDGYGAGQLISFEFDDSGTAFARYTNGQSRAIGQVALASFRNNNGLQPVGGSNYVE 343 Query: 180 NIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 + ++ +E +N + E+ +I + F + +I +++ Sbjct: 344 SFGSGGPNIGVPGNSGRGNIQSSAVEQANVDITQELVNLIVAQRNFQANAQVISTEDQAT 403 Query: 235 LEAIR 239 I Sbjct: 404 QAVIN 408 >gi|219670134|ref|YP_002460569.1| hypothetical protein Dhaf_4124 [Desulfitobacterium hafniense DCB-2] gi|219540394|gb|ACL22133.1| protein of unknown function DUF1078 domain protein [Desulfitobacterium hafniense DCB-2] Length = 426 Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats. Identities = 27/139 (19%), Positives = 46/139 (33%), Gaps = 12/139 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S ++ + ++ V +N++N +T GF+ +V FS ++ Sbjct: 1 MLRSLYSAISGLKNHQIKMDVVGNNIANVNTTGFKRSRVTFSTMLSQTMKGAGSPSANQG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 Q GS +TG D + G +F + I+ R G F Sbjct: 61 GTNPAQVGLGSMVSSIDQIMTTGSSQNTGKSTDAMINGRGFFVFRNAGQIVYGRAGAFSQ 120 Query: 109 TDDGSLVSASGKYPVLDMA 127 +G L VL Sbjct: 121 DQNGYLTDPGTGAFVLGQM 139 Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 14/89 (15%), Positives = 31/89 (34%), Gaps = 5/89 (5%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYE 209 I + + + G N+ + + + T + +E SN + E Sbjct: 333 IGQLAIANFANDAGLQNVGNNFYAATNNSGIADIGAAGTAGRGNIIPNSVEMSNVDLSQE 392 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAI 238 MI + F + + +I ++ + E I Sbjct: 393 FTDMIVTQRGFQANSRVITVSDSLLQELI 421 >gi|229132600|ref|ZP_04261448.1| Flagellar basal-body rod protein flgG [Bacillus cereus BDRD-ST196] gi|228650832|gb|EEL06819.1| Flagellar basal-body rod protein flgG [Bacillus cereus BDRD-ST196] Length = 257 Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats. Identities = 44/255 (17%), Positives = 81/255 (31%), Gaps = 15/255 (5%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53 IG + Q ++ ++N++N T GF+ + + +I Sbjct: 1 MNGLYIGSMGMMNYMQHINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGATTNIG 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDF-----ALEGDAWFALESPRGIILTRDGRFKV 108 V +++ G+ T + DF A ++F LTRDG F + Sbjct: 61 SVDYAVVPAATHVNLVQGNVQMTNSATDFFLDDGAAGTSSFFVTSKNDETFLTRDGSFTL 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 D L +ASG + + + I + +VD Sbjct: 121 NSDRYLQTASGAFVMGENNERIRIPEGAKVAVQADGTLYDEVTQNNIGRLQTKTVDAETN 180 Query: 169 --FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 V+REN + VK LE+SN + EM ++ + + + Sbjct: 181 ARLVQRENKSFTLAEGNLADLPNGTGIVKNHMLENSNVDMTKEMADLMSSQKMIQASQRI 240 Query: 227 IDENEKSMLEAIRNI 241 + +K + I Sbjct: 241 MTSFDKIYEKEANEI 255 >gi|152975186|ref|YP_001374703.1| flagellar basal body rod protein FlgG [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152023938|gb|ABS21708.1| flagellar basal body rod protein [Bacillus cytotoxicus NVH 391-98] Length = 257 Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats. Identities = 44/255 (17%), Positives = 80/255 (31%), Gaps = 15/255 (5%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDIDQKISF 58 IG + Q ++ A+N++N T GF+ + F D Sbjct: 1 MNGIYIGSMGMMNYIQHINVHANNVANAQTPGFKAENLTSKVFDSQNTYRLGDGPSTSVG 60 Query: 59 VASGKEYLSKEVGSFIS-----TGTELDFALEGDA-----WFALESPRGIILTRDGRFKV 108 + + I T DF L+ +F LTRDG+F + Sbjct: 61 TTDYAVVPAATHVNLIQGSVQITNRPTDFYLDDGTSGTASFFVTSKGGETFLTRDGQFTI 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM--S 166 +D L ++SG Y + + + IA + V+ + Sbjct: 121 NEDRYLQTSSGAYVLGENHERIRIPEGTKVKVQEDGMLYDAVSQNHIARLQTKMVNTEVN 180 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 V+REN + V+ LE+SN + EM ++ + + + Sbjct: 181 ARLVQRENKSFTLAEGDIADLPNGTGAVRNYMLENSNVDMTKEMADIMTNQKMVQASQRI 240 Query: 227 IDENEKSMLEAIRNI 241 + +K + I Sbjct: 241 MTSFDKIYEKEANEI 255 >gi|281411901|ref|YP_003345980.1| fagellar hook-basal body protein [Thermotoga naphthophila RKU-10] gi|281373004|gb|ADA66566.1| fagellar hook-basal body protein [Thermotoga naphthophila RKU-10] Length = 755 Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats. Identities = 38/207 (18%), Positives = 69/207 (33%), Gaps = 13/207 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G+ + + V +N+SN +TVGF+ +V F ++ Sbjct: 1 MMRSLYSGITGLKNFQVAMDVVGNNISNVNTVGFKASRVNFETMLAQTIKAGRSSQENVG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 + Q GSF +TG + D A++GD +F + TR G F + Sbjct: 61 GTNPMQIGLGSQVSSIDKIMTQGSFQNTGVKTDLAIQGDGFFIVSDGSSYYYTRAGAFTL 120 Query: 109 TDDGSLV-SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 +G+L+ +++G A + ++ N + G + +V Sbjct: 121 DSNGNLIQTSTGYKVQGWTAVQDPETGERYIDTNKPIGDLVISAGMTMPAKKTSNVRFEG 180 Query: 168 GFVRRENSGISPNIPPTPLEDLSGVTV 194 + G V V Sbjct: 181 NLNSKLGPGSFVITLTDENGINHDVRV 207 Score = 81.8 bits (200), Expect = 7e-14, Method: Composition-based stats. Identities = 18/125 (14%), Positives = 37/125 (29%), Gaps = 6/125 (4%) Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQK-GKVIATMGLYSVDMSQGFVRRENSGISP 179 + + G S V+ + L + G NS Sbjct: 628 NIPWQDGNPMGVLESFAINEQGEIIGTFSNGLTDVLGQIALAVFNNPSGLSEVGNSLYVV 687 Query: 180 NIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 + + + + + G LE SN + E +MI + F + +I ++ + Sbjct: 688 SANSGVPKIGAPGSGGRGILIPGALEMSNVDLAEEFTKMIVAQRGFQANARVITTADQIL 747 Query: 235 LEAIR 239 E + Sbjct: 748 NELVN 752 >gi|269796390|ref|YP_003315845.1| flagellar hook protein FlgE [Sanguibacter keddieii DSM 10542] gi|269098575|gb|ACZ23011.1| flagellar hook protein FlgE [Sanguibacter keddieii DSM 10542] Length = 394 Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats. Identities = 27/138 (19%), Positives = 50/138 (36%), Gaps = 12/138 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G++ + L +N++N +T GF+ + +F + + + Sbjct: 1 MLRSLFSGISGLRTHQTMLDVTGNNIANVNTTGFKASQTQFKDTLSQVLTNAGGAQGGVG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 + Q V + + G+ T D + GD +F + TR G F Sbjct: 61 GTNPAQVGLGVQLAGVTTNFQQGAAQVTNRSTDMMISGDGFFVVSKNGENFYTRSGAFDF 120 Query: 109 TDDGSLVSASGKYPVLDM 126 +G+LV+A G Sbjct: 121 DANGNLVTAEGALVQGWA 138 Score = 83.4 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 16/136 (11%), Positives = 37/136 (27%), Gaps = 5/136 (3%) Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 G S + D + + + L + G Sbjct: 256 DVTGFAKLTSIETASKDGQRAGSLQSFTINADGTIIGAFSNGLKSPVGRIALGTFANPVG 315 Query: 169 FVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223 + S + + ++ G LE SN + E +I + F + Sbjct: 316 LEKAGGSLYTTTVNSGEAAIGTAGTGGRGSLVGGALEMSNVDLSQEFTNLIIAQRGFQAN 375 Query: 224 TTLIDENEKSMLEAIR 239 + +I +++ + E + Sbjct: 376 SRVITTSDELLQELVN 391 >gi|222100886|ref|YP_002535454.1| hypothetical protein CTN_1912 [Thermotoga neapolitana DSM 4359] gi|221573276|gb|ACM24088.1| Putative uncharacterized protein [Thermotoga neapolitana DSM 4359] Length = 759 Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats. Identities = 38/207 (18%), Positives = 68/207 (32%), Gaps = 13/207 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G+ + + V +N+SN +TVGF+ +V F ++ Sbjct: 2 MMRSLYSGITGLKNFQVAMDVVGNNISNVNTVGFKASRVNFETMLAQTIKAGRAPQESVG 61 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 + Q GSF +TG + D A++GD +F + TR G F + Sbjct: 62 GTNPMQIGLGSQVASIDKIMTQGSFQNTGVKTDLAIQGDGFFIVSDGNAYYYTRAGAFTL 121 Query: 109 TDDGSLV-SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 +G+L+ +++G A + ++ N + G + +V Sbjct: 122 DSNGNLIQTSTGYKVQGWTAVQDPETGERYIDTNRPIGDLVISAGMTMPAKKTSNVRFEG 181 Query: 168 GFVRRENSGISPNIPPTPLEDLSGVTV 194 G V V Sbjct: 182 NLNSNVGPGSFTITLTDDSGVDHDVRV 208 Score = 82.6 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 19/125 (15%), Positives = 37/125 (29%), Gaps = 6/125 (4%) Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQK-GKVIATMGLYSVDMSQGFVRRENSGISP 179 + + G S V+ + L + G + NS + Sbjct: 632 NIPWQDGNPMGVLESFAINEQGEIIGTFSNGLTDVLGQIALAVFNNPAGLMEVGNSLYAV 691 Query: 180 NIPPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 + T+ G LE SN + E +MI + F + +I ++ + Sbjct: 692 SSNSGVPKIGAPGSGGRGTLIPGALEMSNVDLAEEFTKMIVAQRGFQANARVITTADQIL 751 Query: 235 LEAIR 239 E + Sbjct: 752 NELVN 756 >gi|302389667|ref|YP_003825488.1| fagellar hook-basal body protein [Thermosediminibacter oceani DSM 16646] gi|302200295|gb|ADL07865.1| fagellar hook-basal body protein [Thermosediminibacter oceani DSM 16646] Length = 404 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 66/179 (36%), Gaps = 12/179 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G+ + ++ + +N++N +TVG++ +V F + + Sbjct: 1 MMRSMFSGVTGLRNHQIKMDVIGNNIANVNTVGYKKSRVTFQDTLSQTMRGASSAQGNRG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 Q + S +TG D A+EGD +F L +G TR G F Sbjct: 61 GTNPMQIGLGMTIAAIDTIHTPTSLEATGNMTDLAIEGDGFFILSDGQGYYYTRAGNFGF 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 + G+LV+ + + V+ + PQ + N+ + + K I Q Sbjct: 121 DEQGNLVNTANGFKVMGWQDSSSKTPQDIKPINIQKGMLMPAKPTDIVVFAKNLNKADQ 179 Score = 80.7 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 16/122 (13%), Positives = 41/122 (33%), Gaps = 5/122 (4%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + + + + + +A + L + G ++ + + + Sbjct: 280 YQNGYPAGTLLGISVDSTGTITGVFDNGQTMELAQVALAVFNNPAGLMKAGRNMYTYSNN 339 Query: 183 PTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + T+ G LE SN + E QMI + F + + +I +++ + E Sbjct: 340 SGEPQIGLAGTGGRGTISPGSLEMSNVDLAEEFTQMIITQRGFQANSRVITASDEMLQEL 399 Query: 238 IR 239 + Sbjct: 400 VN 401 >gi|226225729|ref|YP_002759835.1| flagellar hook protein FlgE [Gemmatimonas aurantiaca T-27] gi|226088920|dbj|BAH37365.1| flagellar hook protein FlgE [Gemmatimonas aurantiaca T-27] Length = 506 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 37/194 (19%), Positives = 69/194 (35%), Gaps = 12/194 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ + R+ + +N++N +TV F+ +V F E + Sbjct: 1 MLRSLYAGVSGLRNNQVRMDVIGNNIANVNTVAFKAGRVTFKEGFAQLLAGASRPPGDQG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 Q + G G+ +TG D A++GD++F + TR G F+V Sbjct: 61 GINPIQIGLGMQIGSIDQIFNQGNLETTGLNTDIAIQGDSFFVVRKGNQSFYTRAGNFQV 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 G LVS + + V Q+ + + ++S + + Sbjct: 121 DALGQLVSPANGFIVQGRMYENGQLQDGIQDIRLPFGQKVSANPTTDMKLAGNLNASAPV 180 Query: 169 FVRRENSGISPNIP 182 F N + +P Sbjct: 181 FQGDFNDPMDRALP 194 Score = 80.3 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 22/158 (13%), Positives = 51/158 (32%), Gaps = 5/158 (3%) Query: 87 DAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG 146 + +P I LT G + S++ + + + F + Sbjct: 346 NFAVPGANPVRIDLTLGGGVNGLTQFASTSSTAVLRDQNGYTAGTLQNFSIDRFGLITGF 405 Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLED 201 + +A + L + G +R ++ + + S + G LE Sbjct: 406 FTNGTTSPLARIVLADFNNPSGLLRIGDNMYQESANSGGAVLGFALEGSQSQMTSGALEM 465 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E MI + F + ++ +++ + E + Sbjct: 466 SNVDLAQEFTNMIVAQRGFQANGKVVSTSDEMLQELMT 503 >gi|51598543|ref|YP_072731.1| flagellar hook protein FlgE [Borrelia garinii PBi] gi|51573114|gb|AAU07139.1| flagellar hook protein [Borrelia garinii PBi] Length = 442 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 55/139 (39%), Gaps = 12/139 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ + R+ V +N++N +T+GF+ +V F +++ + Sbjct: 1 MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIGFKKGRVNFQDMISQSISGASRPTDSRG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 Q + G+F ST D + G+ +F L+ + + TR G F V Sbjct: 61 GTNPKQVGLGMNVATIDTIHTQGAFQSTQKASDLGVSGNGFFILKEGKNLFYTRAGAFDV 120 Query: 109 TDDGSLVSASGKYPVLDMA 127 D LV+ + + Sbjct: 121 DSDRHLVNPANGMRIQGWM 139 Score = 78.4 bits (191), Expect = 7e-13, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 46/141 (32%), Gaps = 5/141 (3%) Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 G + + S+S K + D + + + V + + + + L S Sbjct: 299 GSYTDSITQFADSSSTKAIIQDGYGMGYMENYEIDQNGVIVGIYSNGIRRDLGKIALASF 358 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQ 218 G + ++ + ++ G LE +N + + MI + Sbjct: 359 MNPGGLAKSGDTNFVETSNSGQVRIGETGLAGLGDIRSGVLEMANVDLAEQFTDMIVTQR 418 Query: 219 KFNSITTLIDENEKSMLEAIR 239 F + I +++ + E +R Sbjct: 419 GFQANAKTITTSDQLLQELVR 439 >gi|75762829|ref|ZP_00742649.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228900355|ref|ZP_04064584.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis IBL 4222] gi|74489683|gb|EAO53079.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228859242|gb|EEN03673.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis IBL 4222] Length = 259 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 45/255 (17%), Positives = 83/255 (32%), Gaps = 15/255 (5%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53 IG + QR++ ++N++N T GF+ + + +I Sbjct: 3 MNGLYIGSMGMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIG 62 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDF-----ALEGDAWFALESPRGIILTRDGRFKV 108 V +++ G+ T + DF A ++F LTRDG F + Sbjct: 63 SVDYAVVPAATHVNLVQGNIQMTNSATDFFLDDGAAGTTSFFVTSKNDETFLTRDGSFTL 122 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 D L ++SG + + + IA + +VD Sbjct: 123 NSDRYLQTSSGAFVMGENNERIRIPEGAKVAVQADGTLYDEVTQNNIARLQTKTVDAETN 182 Query: 169 --FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 V+REN + VK LE+SN + EM ++ + + + Sbjct: 183 ARLVQRENKSFTLAEGNIANLPNGTGIVKNHMLENSNVDMTKEMADLMTDQKMIQASQRV 242 Query: 227 IDENEKSMLEAIRNI 241 + +K + I Sbjct: 243 MTSFDKIYEKEANEI 257 >gi|310659663|ref|YP_003937384.1| flagellar basal body rod protein [Clostridium sticklandii DSM 519] gi|308826441|emb|CBH22479.1| putative Flagellar basal body rod protein [Clostridium sticklandii] Length = 372 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 42/196 (21%), Positives = 80/196 (40%), Gaps = 5/196 (2%) Query: 52 IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFKVT 109 I + + ++ G+ T L A+EG +F I +R+G F + Sbjct: 175 IGTMNGGALADRSMINFNQGNLDPTENPLHVAIEGKGFFKILDMQDNQIKYSRNGGFSIN 234 Query: 110 DDGSLVSASGKYP---VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 +G LV SG + SVP + D + + + I T+G+ ++ + Sbjct: 235 PEGILVDYSGNVVLSASDNEISVPEGASKIDIDKFGNIVATVDGEPEEIDTLGVVNIANT 294 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 + +++ S ++ E V +G+LE SN + + EM +MI+L + + S + Sbjct: 295 ESMIKQGESYLTMADGIEADEAEFDGQVLQGYLEGSNVDIISEMAEMINLLRGYESGQKV 354 Query: 227 IDENEKSMLEAIRNIA 242 I + M +A I Sbjct: 355 IRSYDDIMSKAANEIG 370 Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 26/199 (13%), Positives = 62/199 (31%), Gaps = 3/199 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M +R+ + N++N+ T F+ + + ++ + + Sbjct: 1 MFRGIYTATNGMRTDSKRIDVITSNIANSQTTAFKKDVLVTESFPEQLMVKLNGVENNLR 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 ++ ++ + + T + +F +E GI + + ++G L +A Sbjct: 61 PTRQLVNVDPPADFQTNDSIVSIEITSGYFRMEDRHGIGYHKSAKITRDEEGYLRTALRD 120 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 A + + G I+ I G V + N+ + Sbjct: 121 SDSNTHAKFGAYLLDVNGNPISAPDGAITLLPNGILQAGGQDV---ARVITAVNAQVIGT 177 Query: 181 IPPTPLEDLSGVTVKRGFL 199 + L D S + +G L Sbjct: 178 MNGGALADRSMINFNQGNL 196 >gi|229178180|ref|ZP_04305551.1| Flagellar basal-body rod protein flgG [Bacillus cereus 172560W] gi|228605310|gb|EEK62760.1| Flagellar basal-body rod protein flgG [Bacillus cereus 172560W] Length = 257 Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 46/255 (18%), Positives = 82/255 (32%), Gaps = 15/255 (5%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53 IG + QR++ ++N++N T GF+ + + +I Sbjct: 1 MNGLYIGSMGMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIG 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDF-----ALEGDAWFALESPRGIILTRDGRFKV 108 V +++ G+ T + DF A ++F LTRDG F + Sbjct: 61 SVDYAVVPAATHVNLVQGNIQMTNSATDFFLDDGAAGTTSFFVTSKNDETFLTRDGSFTL 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 D L ++SG Y + IA + +VD Sbjct: 121 NSDRYLQTSSGAYVMDVNNERIRIPEGAKVAVQADGTLYDEVTQNNIARLQTKTVDAETN 180 Query: 169 --FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 V+REN + VK LE+SN + EM ++ + + + Sbjct: 181 ARLVQRENKSFTLAEGNIANLPNGTGIVKNHMLENSNVDMTKEMADLMTDQKMIQASQRV 240 Query: 227 IDENEKSMLEAIRNI 241 + +K + I Sbjct: 241 MTSFDKIYEKEANEI 255 >gi|312147981|gb|ADQ30640.1| flagellar hook protein FlgE [Borrelia burgdorferi JD1] Length = 442 Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 55/139 (39%), Gaps = 12/139 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ + R+ V +N++N +T+GF+ +V F +++ + Sbjct: 1 MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIGFKKGRVNFQDMISQSISGASRPTDARG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 Q + G+F ST D + G+ +F L+ + + TR G F V Sbjct: 61 GTNPKQVGLGMNVASIDTIHTQGAFQSTQKASDLGVSGNGFFILKEGKNLFYTRAGAFDV 120 Query: 109 TDDGSLVSASGKYPVLDMA 127 D LV+ + + Sbjct: 121 DSDRHLVNPANGMRIQGWM 139 Score = 78.4 bits (191), Expect = 7e-13, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 46/141 (32%), Gaps = 5/141 (3%) Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 G + + S+S K + D + + + V + + + + L S Sbjct: 299 GSYTDSITQFADSSSTKAIIQDGYGMGYMENYEIDQNGVIVGIYSNGIRRDLGKIALASF 358 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQ 218 G + ++ + ++ G LE +N + + MI + Sbjct: 359 INPGGLAKSGDTNFVETSNSGQVRIGETGLAGLGDIRSGVLEMANVDLAEQFTDMIVTQR 418 Query: 219 KFNSITTLIDENEKSMLEAIR 239 F + I +++ + E +R Sbjct: 419 GFQANAKTITTSDQLLQELVR 439 >gi|323165587|gb|EFZ51374.1| flagellar basal-body rod protein flgG [Shigella sonnei 53G] Length = 143 Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 49/129 (37%), Gaps = 14/129 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M +S I A + + +A+N++N T GF+ + F +++ Sbjct: 1 MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q + V G+ T D A++G +F + P TRDG F Sbjct: 61 TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGSSAYTRDGSF 120 Query: 107 KVTDDGSLV 115 +V +G LV Sbjct: 121 QVDQNGQLV 129 >gi|228945375|ref|ZP_04107730.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228814347|gb|EEM60613.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 257 Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 43/255 (16%), Positives = 85/255 (33%), Gaps = 15/255 (5%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53 IG + QR++ ++N++N T GF+ + + +I Sbjct: 1 MNGLYIGSMGMMNYMQRINVHSNNVANAQTAGFKAENMTSKVFDVQDTYRRGDGAVTNIG 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDA-----WFALESPRGIILTRDGRFKV 108 V +++ G+ T + DF L+ +F LTRDG F + Sbjct: 61 SVDYAVVPAATHVNLVQGNIQMTNSATDFFLDDGTAGTASFFVTSKNNETFLTRDGSFTL 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV--DMS 166 D L + SG + + + + IA + +V + + Sbjct: 121 NSDRYLQTTSGAFVMGENNERIRIPEGAKVAVQADGTLYDAVTQNNIARLQTKTVGAEAN 180 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 ++REN + VK LE+SN + EM ++ + ++ + Sbjct: 181 NRLIQRENKSFTLAEGNIADLPNGTGLVKNHMLENSNVDMTKEMADLMTDQRMISASQRV 240 Query: 227 IDENEKSMLEAIRNI 241 + +K + I Sbjct: 241 MTSFDKIYEKEANEI 255 >gi|229172418|ref|ZP_04299977.1| Flagellar basal-body rod protein flgG [Bacillus cereus MM3] gi|228610889|gb|EEK68152.1| Flagellar basal-body rod protein flgG [Bacillus cereus MM3] Length = 257 Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 45/255 (17%), Positives = 86/255 (33%), Gaps = 15/255 (5%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53 IG + QR++ ++N++N T GF+ + + +I Sbjct: 1 MNGLYIGSMGMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIG 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDA-----WFALESPRGIILTRDGRFKV 108 V +++ G+ T + DF L+ +F LTRDG F + Sbjct: 61 SVDYAVVPAATHVNLVQGNIQMTNSATDFFLDDGTAGTASFFVTSKNNETFLTRDGSFTL 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV--DMS 166 D L + SG + + + + IA + +V + + Sbjct: 121 NSDRYLQTTSGAFVMGENNERIRIPEGAKVAVQADGTLYDAVTQNNIARLQTKTVGAEAN 180 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 V+REN + TVK LE+SN + EM ++ + ++ + Sbjct: 181 NRLVQRENKSFTLAEGNIADLPNGVGTVKNHMLENSNVDMTKEMADLMTDQKMISASQRV 240 Query: 227 IDENEKSMLEAIRNI 241 + +K + I Sbjct: 241 MTSFDKIYEKEANEI 255 >gi|229058421|ref|ZP_04196805.1| Flagellar basal-body rod protein flgG [Bacillus cereus AH603] gi|228719930|gb|EEL71520.1| Flagellar basal-body rod protein flgG [Bacillus cereus AH603] Length = 257 Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 44/255 (17%), Positives = 81/255 (31%), Gaps = 15/255 (5%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53 IG + Q ++ ++N++N T GF+ + + +I Sbjct: 1 MNGLYIGSMGMMNYMQHINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAMTNIG 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDF-----ALEGDAWFALESPRGIILTRDGRFKV 108 V +++ G+ T + DF A ++F LTRDG F + Sbjct: 61 SVDYAVVPAATHVNLVQGNIQMTNSATDFFLDDGAAGTSSFFVTSKNDETFLTRDGSFTL 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 D L +ASG + + + I + +VD Sbjct: 121 NSDRYLQTASGAFVMGENNERIRIPEGAKVAVQADGTLYDEVTQNNIGRLQTKTVDAETN 180 Query: 169 --FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 V+REN + VK LE+SN + EM ++ + + + Sbjct: 181 ARLVQRENKSFTLAEGNLADLPNGTGIVKNHMLENSNVDMTKEMADLMSSQKMIQASQRI 240 Query: 227 IDENEKSMLEAIRNI 241 + +K + I Sbjct: 241 MTSFDKIYEKEANEI 255 >gi|228984857|ref|ZP_04145027.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228774807|gb|EEM23203.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 257 Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 45/255 (17%), Positives = 86/255 (33%), Gaps = 15/255 (5%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53 IG + QR++ ++N++N T GF+ + + +I Sbjct: 1 MNGLYIGSMGMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVINIG 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDA-----WFALESPRGIILTRDGRFKV 108 V +++ G+ T + DF L+ +F LTRDG F + Sbjct: 61 SVDYAVVPAATHVNLVQGNIQMTNSATDFFLDDGTAGTASFFVTSKNNETFLTRDGSFTL 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV--DMS 166 D L + SG + + + + IA + +V + + Sbjct: 121 NSDRYLQTTSGAFVMGENNERIRIPEGAKVAVQADGTLYDAVTQNNIARLQTKTVGAEAN 180 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 V+REN + TVK LE+SN + EM ++ + ++ + Sbjct: 181 NRLVQRENKSFTLAEGNIADLPNGVGTVKNYMLENSNVDMTKEMADLMTDQKMISASQRV 240 Query: 227 IDENEKSMLEAIRNI 241 + +K + I Sbjct: 241 MTSFDKIYEKEANEI 255 >gi|769850|gb|AAA91361.1| flagellar distal rod protein [Borrelia burgdorferi N40] Length = 372 Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 55/139 (39%), Gaps = 12/139 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ + R+ V +N++N +T+GF+ +V F +++ + Sbjct: 1 MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIGFKKGRVNFQDMISQSISGASRPTDARG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 Q + G+F ST D + G+ +F L+ + + TR G F V Sbjct: 61 GTNPKQVGLGMNVASIDTIHTQGAFQSTQKASDLGVSGNGFFILKEGKNLFYTRAGAFDV 120 Query: 109 TDDGSLVSASGKYPVLDMA 127 D LV+ + + Sbjct: 121 DSDRHLVNPANGMRIQGWM 139 >gi|163939582|ref|YP_001644466.1| flagellar basal body rod protein FlgG [Bacillus weihenstephanensis KBAB4] gi|163861779|gb|ABY42838.1| flagellar basal body rod protein [Bacillus weihenstephanensis KBAB4] Length = 257 Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 44/255 (17%), Positives = 83/255 (32%), Gaps = 15/255 (5%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53 IG + Q ++ ++N++N T GF+ + + +I Sbjct: 1 MNGLYIGSMGMMNYMQHINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGSATNIG 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDF-----ALEGDAWFALESPRGIILTRDGRFKV 108 V +++ G+ T + DF A ++F LTRDG F + Sbjct: 61 SVDYAVVPAATHVNLVQGNVQMTNSATDFFLDDGAAGTSSFFVTSKNDETFLTRDGSFTL 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD--MS 166 D L +ASG + + + IA + +VD + Sbjct: 121 NSDRYLQTASGAFVMGENNERIRIPEGAKVAVQADGTLYDEVTQNNIARLQTKTVDVETN 180 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 V+REN + V+ LE+SN + EM ++ + + + Sbjct: 181 ARLVQRENKSFTLAEGNVADLPNGTGAVRNHMLENSNVDMTKEMADLMTNQKMIQASQRI 240 Query: 227 IDENEKSMLEAIRNI 241 + +K + I Sbjct: 241 MTSFDKIYEKEANEI 255 >gi|220913724|ref|YP_002489033.1| hypothetical protein Achl_2983 [Arthrobacter chlorophenolicus A6] gi|219860602|gb|ACL40944.1| protein of unknown function DUF1078 domain protein [Arthrobacter chlorophenolicus A6] Length = 390 Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 31/138 (22%), Positives = 50/138 (36%), Gaps = 12/138 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK----------- 49 M S G++ A + L +N++N +T GF+ +F + + + Sbjct: 1 MLRSLYSGISGLRAHQTMLDVTGNNIANVNTTGFKASATQFQDTLSQMTQAAAAGQDGAA 60 Query: 50 -NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 ++ Q V + GS STG D + GD +F TR G F+ Sbjct: 61 GSNPAQIGLGVRVAGISTNFGQGSAQSTGRGSDMMISGDGFFITGKGAQNFYTRAGAFEP 120 Query: 109 TDDGSLVSASGKYPVLDM 126 +G LVS G Sbjct: 121 DSEGRLVSPDGGILQGWT 138 Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 31/92 (33%), Gaps = 5/92 (5%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSM 207 +V+A + L G + S + T+ G LE SN + Sbjct: 296 EVLARVALARFANPGGLEKAGGSSYVATGNSGAAQVGTPGQAGMGTLATGSLEMSNVDLS 355 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E +I + F + +I +++ + E Sbjct: 356 QEFTNLIVAQRGFQANARIITTSDEVLQELSN 387 >gi|219684598|ref|ZP_03539541.1| flagellar hook protein FlgE [Borrelia garinii PBr] gi|219671960|gb|EED29014.1| flagellar hook protein FlgE [Borrelia garinii PBr] Length = 442 Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 55/139 (39%), Gaps = 12/139 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ + R+ V +N++N +T+GF+ +V F +++ + Sbjct: 1 MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIGFKKGRVNFQDMISQSISGASRPTDSRG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 Q + G+F ST D + G+ +F L+ + + TR G F V Sbjct: 61 GTNPKQVGLGMNVATIDTIHTQGAFQSTQKASDLGVSGNGFFILKEGKNLFYTRAGAFDV 120 Query: 109 TDDGSLVSASGKYPVLDMA 127 D LV+ + + Sbjct: 121 DSDRHLVNPANGMRIQGWM 139 Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 46/141 (32%), Gaps = 5/141 (3%) Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 G + + S+S K + D + + + V + + + + L S Sbjct: 299 GSYTDSITQFADSSSTKAIIQDGYGMGYMENYEIDQNGVIVGVYSNGIRRDLGKIALASF 358 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQ 218 G + ++ + ++ G LE +N + + MI + Sbjct: 359 MNPGGLAKSGDTNFVETSNSGQVRIGETGLAGLGDIRSGVLEMANVDLAEQFTDMIVTQR 418 Query: 219 KFNSITTLIDENEKSMLEAIR 239 F + I +++ + E +R Sbjct: 419 GFQANAKTITTSDQLLQELVR 439 >gi|221636048|ref|YP_002523924.1| flagellar hook protein FlgE [Thermomicrobium roseum DSM 5159] gi|221157294|gb|ACM06412.1| flagellar hook protein FlgE [Thermomicrobium roseum DSM 5159] Length = 423 Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 74/206 (35%), Gaps = 23/206 (11%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S ++ A + + + +N++N +T GF+ +V+F++++ + Sbjct: 1 MMRSMFSAISGLRAHQTWMDVIGNNIANVNTTGFKVGRVRFTDILSQLVRGASGPTETRG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 Q G G+ TG D A++GD +F + + TRDG F + Sbjct: 61 GINPLQIGLGAVVGAVDTIHTQGALQLTGKPSDLAIQGDGFFVVSDGSQTLYTRDGAFDI 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 D LV+ S + VL + G G + +G + Sbjct: 121 GSDLRLVNPSNGFYVLG-----------WQADANGNVDTAGPVGPITIPIGQQLDAVPTT 169 Query: 169 FVRRENSGISPNIPPTPLEDLSGVTV 194 + + + + P ++ V++ Sbjct: 170 QITVQGNLNANQDPAATPHFVTKVSI 195 Score = 93.0 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 36/93 (38%), Gaps = 5/93 (5%) Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLEDSNANS 206 KV+ + L G ++ + P + P + + G+LE SN + Sbjct: 328 TKVVGQIALALFTNPGGLMKVGGNAYLPTVNSGEPIVGPADSGGRGKIASGYLEMSNVDL 387 Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E MI + F + + +I +++ + E + Sbjct: 388 AQEFTSMIMAQRGFQANSRVITTSDEVLQELVN 420 >gi|313901443|ref|ZP_07834901.1| fagellar hook-basal body protein [Thermaerobacter subterraneus DSM 13965] gi|313468293|gb|EFR63749.1| fagellar hook-basal body protein [Thermaerobacter subterraneus DSM 13965] Length = 406 Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 14/142 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ + R+ + +N++N +TVG+++ +V F E+ Sbjct: 1 MMRSLYAGISGLQNHQLRMDVIGNNIANVNTVGYKSSRVTFKELFNQTLRGASAPAGPAR 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q A G + + G+ TG D A++GD +F L+ G TR G F Sbjct: 61 GGTNPIQIGLGTALGGIDVIHQAGNPQVTGVVTDMAIQGDGFFVLQDATGGYAYTRAGDF 120 Query: 107 KVTDDGSLVSASGKYPVLDMAS 128 ++ +G LV+A G + A Sbjct: 121 RLDAEGYLVNADGLRVLGWQAQ 142 Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 34/93 (36%), Gaps = 4/93 (4%) Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE----DLSGVTVKRGFLEDSNANS 206 + IA + L + G +R N N +V G LE SN + Sbjct: 311 MTQPIAQVALAAFANPAGLLRDGNLYWESNNSGVARIGEAGTGGRGSVTPGALEMSNVDL 370 Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E MI + F + + +I +++ + E + Sbjct: 371 SREFVDMIVTQRGFQANSRVITTSDEMLQELVN 403 >gi|322378470|ref|ZP_08052922.1| flagellar hook protein FlgE [Helicobacter suis HS1] gi|321149114|gb|EFX43562.1| flagellar hook protein FlgE [Helicobacter suis HS1] Length = 718 Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 65/197 (32%), Gaps = 15/197 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G+ A + L ++N++N +T GF+ + F +++ + Sbjct: 1 MLRSLWSGVNGMQAHQIALDIESNNIANVNTTGFKYSRASFVDMLSQVKLIATAPYKNGL 60 Query: 49 -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGR 105 + V G+ +T + D A+EGD +F + RG+ TR G Sbjct: 61 AGQNDFSVGLGVGVDATTKIFSQGNLQNTDVKTDLAIEGDGFFVISPDRGVTRNFTRSGE 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 F +GSLV+ G + + E + + I + Sbjct: 121 FLFDANGSLVTTGGYVVQGWVRDPKDMGSKDSETDMLKIDNTKPLQNIRIDPGMVMPARS 180 Query: 166 SQGFVRRENSGISPNIP 182 S R N + Sbjct: 181 SSKITMRANLNAGRHAD 197 Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats. Identities = 14/128 (10%), Positives = 36/128 (28%), Gaps = 5/128 (3%) Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + + + + + V + K +A + L + G S Sbjct: 588 SETYAIEQNGYQAGDLMDVRFDNDGVLLGSFSNGKTLSLAQVALANFANDAGLQADGGSV 647 Query: 177 ISPNIPPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 S V LE SN + + +I + + F + + + ++ Sbjct: 648 FSETSNSGKALIGAANTGRRGGVSGSKLESSNVDLSRSLTNLIVVQRGFQANSKAVTTSD 707 Query: 232 KSMLEAIR 239 + + + Sbjct: 708 QILNTLLN 715 >gi|116328901|ref|YP_798621.1| flagellar hook protein FlgE [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116330492|ref|YP_800210.1| flagellar hook protein FlgE [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116121645|gb|ABJ79688.1| Endoflagellar hook protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116124181|gb|ABJ75452.1| Endoflagellar hook protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 464 Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 69/213 (32%), Gaps = 14/213 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-------- 52 M S G++ + R+ + +N+SN +T GF+T +V F +++ Sbjct: 1 MMRSLYSGVSGLKNHQVRMDVIGNNISNVNTHGFKTERVTFQDMISQELRGASEPKENIG 60 Query: 53 ----DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 Q GS +TG D A+ G+ +F ++ TR G F + Sbjct: 61 GVNPQQVGLGSLIAAIDKIMTQGSLQTTGKNTDVAMSGEGFFIVKDGDKQFYTRAGAFNL 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 +G V+ + V + K + + I +D Sbjct: 121 DKNGYYVNPANGLKVQGWNARLDDKGNKFINSSASIEDIIIPVYSKEPARATSQIDFKSN 180 Query: 169 FVRRENSGI--SPNIPPTPLEDLSGVTVKRGFL 199 + + T + + ++RG + Sbjct: 181 LNSSAPAVPPDATQEEITAMINDPDPKMRRGHV 213 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 13/122 (10%), Positives = 38/122 (31%), Gaps = 5/122 (4%) Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 D ++ + + + +A + + G + ++ + ++ Sbjct: 339 VKQDGYTMGYLESFSIDNSGTITGVFSNGVRQPLARIATAVFNNPAGLDKAGDTMFAYSM 398 Query: 182 PPTPLEDLS-----GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + G LE SN + + MI + F + + I +++ + E Sbjct: 399 NSGEPNIGEAGVQGRGKINAGLLEMSNVDLSDQFTDMIVTQRGFQANSRTITTSDQMIQE 458 Query: 237 AI 238 + Sbjct: 459 VL 460 >gi|32267203|ref|NP_861235.1| flagellar hook protein FlgE [Helicobacter hepaticus ATCC 51449] gi|32263256|gb|AAP78301.1| flagellar hook protein FlgE [Helicobacter hepaticus ATCC 51449] Length = 718 Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 63/179 (35%), Gaps = 15/179 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G++ A + L ++N++N +TVGF+ + F +++ I Sbjct: 1 MLRSLWSGVSGMQAHQIALDVESNNIANVNTVGFKYSRASFVDMLSQIKLIATSPYKNGL 60 Query: 49 -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGR 105 + V G+ +T + D A+EGD +F + RG TR+G Sbjct: 61 GGQNDFSVGLGVGIDATTKVFSQGNTQNTDVKTDVAIEGDGFFIISPDRGTTHNYTRNGE 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 F +G+LV+ G + + + + + I + Sbjct: 121 FLFDANGNLVTTGGYVVQGWVRPPLEAAESGTMSDFDFFRVDNTGPVRNIQIDPGMVMP 179 Score = 71.1 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 14/128 (10%), Positives = 41/128 (32%), Gaps = 5/128 (3%) Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + + + + + + + +A + L + + G + Sbjct: 588 SETYSINQNGYQAGDLMDIRFDSNGSLLGAFSNGRSIALAQVALANFANNAGLQAEGGNV 647 Query: 177 ISPNIPPTPLEDLSGVTVKRG-----FLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 S + T +RG LE SN + + Q+I + + F + + + ++ Sbjct: 648 YSQTGNSGEPMVGAANTGRRGGVSGSKLEMSNVDLSRSLTQLIVVQRGFQANSKAVTTSD 707 Query: 232 KSMLEAIR 239 + + + Sbjct: 708 QILNTLLN 715 >gi|183220587|ref|YP_001838583.1| flagellar hook protein FlgE [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189910695|ref|YP_001962250.1| flagellar hook protein FlgE [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167775371|gb|ABZ93672.1| Endoflagellar hook protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779009|gb|ABZ97307.1| Flagellar hook protein FlgE [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 464 Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 68/218 (31%), Gaps = 14/218 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ + R+ + +N+SN +T GF+T +V F +++ Sbjct: 1 MMRSLYSGVSGLKNHQVRMDVIGNNISNVNTHGFKTERVTFQDMISQELQGASEPNERIG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 Q G+ +TG D A+ G+ +F ++ TR G F V Sbjct: 61 GTNPKQVGLGSLIAAIDKIMTQGALQTTGKNTDLAVSGEGFFVVKDGDKQFYTRAGAFNV 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 +G V+ + V S + K + + +VD Sbjct: 121 DKNGFYVNPANGLKVQGWNSRLDESGNKYINSAGSLEDIVIPLYSKEPARATQNVDFQSN 180 Query: 169 FVRRENSGISPNIPPTPLEDLSGVTVKR--GFLEDSNA 204 + ++ ++ G + N Sbjct: 181 LNASVAAVPPDATEEDIQRYINDPDPRQRRGHVTSINV 218 Score = 73.4 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 15/122 (12%), Positives = 38/122 (31%), Gaps = 5/122 (4%) Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 D + + + + +A + L + G + ++ S ++ Sbjct: 339 VKQDGYPMGYMESFSIDNTGTVTGVFSNGVRQPLARVALANFTNPAGLNKEGDTMYSFSL 398 Query: 182 PPTPLEDLS-----GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + G LE SN + + MI + F + + I +++ + E Sbjct: 399 NSGEANIGEAGSQGRGKINAGLLEMSNVDLSDQFTDMIVTQRGFQANSRTIVTSDQMIQE 458 Query: 237 AI 238 + Sbjct: 459 VL 460 >gi|219685755|ref|ZP_03540566.1| flagellar hook protein FlgE [Borrelia garinii Far04] gi|219672694|gb|EED29722.1| flagellar hook protein FlgE [Borrelia garinii Far04] Length = 442 Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 55/139 (39%), Gaps = 12/139 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ + R+ V +N++N +T+GF+ +V F +++ + Sbjct: 1 MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIGFKKGRVNFQDMISQSISGASRPTDSRG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 Q + G+F ST D + G+ +F L+ + + TR G F V Sbjct: 61 GTNPKQVGLGMNVATIDTIHTQGAFQSTQKASDLGVSGNGFFILKEGKNLFYTRAGAFDV 120 Query: 109 TDDGSLVSASGKYPVLDMA 127 D LV+ + + Sbjct: 121 DSDRHLVNPANGMRIQGWM 139 Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 46/141 (32%), Gaps = 5/141 (3%) Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 G + + S+S K + D + + + V + + + + L S Sbjct: 299 GSYTDSITQFADSSSTKAIIQDGYGMGYMENYEIDQNGVIVGVYSNGIRRDLGKIALASF 358 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQ 218 G + ++ + ++ G LE +N + + MI + Sbjct: 359 MNPGGLAKSGDTNFVETSNSGQVRIGETGLAGLGDIRSGVLEMANVDLAEQFTDMIVTQR 418 Query: 219 KFNSITTLIDENEKSMLEAIR 239 F + I +++ + E +R Sbjct: 419 GFQANAKTITTSDQLLQELVR 439 >gi|224533123|ref|ZP_03673723.1| flagellar hook protein FlgE [Borrelia burgdorferi WI91-23] gi|224511850|gb|EEF82251.1| flagellar hook protein FlgE [Borrelia burgdorferi WI91-23] gi|312149691|gb|ADQ29762.1| flagellar hook protein FlgE [Borrelia burgdorferi N40] Length = 442 Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 55/139 (39%), Gaps = 12/139 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ + R+ V +N++N +T+GF+ +V F +++ + Sbjct: 1 MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIGFKKGRVNFQDMISQSISGASRPTDARG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 Q + G+F ST D + G+ +F L+ + + TR G F V Sbjct: 61 GTNPKQVGLGMNVASIDTIHTQGAFQSTQKASDLGVSGNGFFILKEGKNLFYTRAGAFDV 120 Query: 109 TDDGSLVSASGKYPVLDMA 127 D LV+ + + Sbjct: 121 DSDRHLVNPANGMRIQGWM 139 Score = 78.4 bits (191), Expect = 9e-13, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 46/141 (32%), Gaps = 5/141 (3%) Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 G + + S+S K + D + + + V + + + + L S Sbjct: 299 GSYTDSITQFADSSSTKAIIQDGYGMGYMENYEIDQNGVIVGIYSNGIRRDLGKIALASF 358 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQ 218 G + ++ + ++ G LE +N + + MI + Sbjct: 359 MNPGGLAKSGDTNFVETSNSGQVRIGETGLAGLGDIRSGVLEMANVDLAEQFTDMIVTQR 418 Query: 219 KFNSITTLIDENEKSMLEAIR 239 F + I +++ + E +R Sbjct: 419 GFQANAKTITTSDQLLQELVR 439 >gi|195941363|ref|ZP_03086745.1| flagellar hook protein FlgE [Borrelia burgdorferi 80a] gi|221217779|ref|ZP_03589247.1| flagellar hook protein FlgE [Borrelia burgdorferi 72a] gi|224533707|ref|ZP_03674295.1| flagellar hook protein FlgE [Borrelia burgdorferi CA-11.2a] gi|225549062|ref|ZP_03770037.1| flagellar hook protein FlgE [Borrelia burgdorferi 94a] gi|225550122|ref|ZP_03771082.1| flagellar hook protein FlgE [Borrelia burgdorferi 118a] gi|226320584|ref|ZP_03796144.1| flagellar hook protein FlgE [Borrelia burgdorferi 29805] gi|221192456|gb|EEE18675.1| flagellar hook protein FlgE [Borrelia burgdorferi 72a] gi|224513000|gb|EEF83363.1| flagellar hook protein FlgE [Borrelia burgdorferi CA-11.2a] gi|225369234|gb|EEG98687.1| flagellar hook protein FlgE [Borrelia burgdorferi 118a] gi|225370288|gb|EEG99726.1| flagellar hook protein FlgE [Borrelia burgdorferi 94a] gi|226234003|gb|EEH32724.1| flagellar hook protein FlgE [Borrelia burgdorferi 29805] Length = 442 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 55/139 (39%), Gaps = 12/139 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ + R+ V +N++N +T+GF+ +V F +++ + Sbjct: 1 MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIGFKKGRVNFQDMISQSISGASRPTDARG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 Q + G+F ST D + G+ +F L+ + + TR G F V Sbjct: 61 GTNPKQVGLGMNVASIDTIHTQGAFQSTQKASDLGVSGNGFFILKEGKNLFYTRAGAFDV 120 Query: 109 TDDGSLVSASGKYPVLDMA 127 D LV+ + + Sbjct: 121 DSDRHLVNPANGMRIQGWM 139 Score = 78.4 bits (191), Expect = 9e-13, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 46/141 (32%), Gaps = 5/141 (3%) Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 G + + S+S K + D + + + V + + + + L S Sbjct: 299 GSYTDSITQFADSSSTKAIIQDGYGMGYMENYEIDQNGVIVGIYSNGIRRDLGKIALASF 358 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQ 218 G + ++ + ++ G LE +N + + MI + Sbjct: 359 MNPGGLAKSGDTNFVETSNSGQVRIGETGLAGLGDIRSGVLEMANVDLAEQFTDMIVTQR 418 Query: 219 KFNSITTLIDENEKSMLEAIR 239 F + I +++ + E +R Sbjct: 419 GFQANAKTITTSDQLLQELVR 439 >gi|229166627|ref|ZP_04294379.1| Flagellar basal-body rod protein flgG [Bacillus cereus AH621] gi|228616881|gb|EEK73954.1| Flagellar basal-body rod protein flgG [Bacillus cereus AH621] Length = 259 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 45/255 (17%), Positives = 81/255 (31%), Gaps = 15/255 (5%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53 IG + Q ++ ++N++N T GF+ + + +I Sbjct: 3 MNGLYIGSMGMMNYMQHINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAMTNIG 62 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDF-----ALEGDAWFALESPRGIILTRDGRFKV 108 V +++ G+ T + DF A ++F LTRDG F + Sbjct: 63 SVDYAVVPAATHVNLVQGNIQMTNSPTDFFLDDGAAGTSSFFVTSKNDETFLTRDGSFTL 122 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 D L +ASG + + + IA + +VD Sbjct: 123 NSDRYLQTASGAFVMGENNERIRIPEGAKVAVQADGTLYDEVTQNNIARLQTKTVDTETN 182 Query: 169 --FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 V+REN VK LE+SN + EM ++ + + + Sbjct: 183 ARLVQRENKSFILAEGNIADLPNGTGIVKNHMLENSNVDMTKEMADLMTNQKMIQASQRI 242 Query: 227 IDENEKSMLEAIRNI 241 + +K + I Sbjct: 243 MTSFDKIYEKEANEI 257 >gi|226223313|ref|YP_002757420.1| flagellar hook-basal body protein FlgG [Listeria monocytogenes Clip81459] gi|225875775|emb|CAS04478.1| Putative flagellar hook-basal body protein FlgG [Listeria monocytogenes serotype 4b str. CLIP 80459] Length = 259 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 43/251 (17%), Positives = 87/251 (34%), Gaps = 16/251 (6%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV--------VGAIKNDID 53 IG A + Q + ++N++N T GF+ ++ + G + + Sbjct: 1 MKGLYIGAAGMMNYMQHIQVHSNNVANAQTPGFKFDQLTSEVISRNKVNYQNGPVARQVG 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFAL------EGDAWFALESPRGIILTRDGRFK 107 V +++ GS T + DF + +G +F I L+R G+F Sbjct: 61 TIDYGVRPAATHINLTAGSSYITNRDRDFFMQDTDPTQGSNFFITAKNGEISLSRGGQFH 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 G L +A G + + ++ G+ + +G V +Q Sbjct: 121 SDQFGFLRTADGANLLSATGEAIQVGQKTSIRAEANGDLYNAETGQYLGRLGTKFVSANQ 180 Query: 168 G--FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225 V+ I N T ++ G +E SN + EM Q++ + + Sbjct: 181 ADSLVKDGEGRIHVNGINTMNLPAGQGIIQNGVIETSNVDLGVEMVQLMDNQRMVQASKN 240 Query: 226 LIDENEKSMLE 236 +++ +K + Sbjct: 241 VVNMFDKVYDK 251 >gi|225552055|ref|ZP_03772995.1| flagellar hook protein FlgE [Borrelia sp. SV1] gi|225371053|gb|EEH00483.1| flagellar hook protein FlgE [Borrelia sp. SV1] Length = 442 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 55/139 (39%), Gaps = 12/139 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ + R+ V +N++N +T+GF+ +V F +++ + Sbjct: 1 MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIGFKKGRVNFQDMISQSISGASRPTDARG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 Q + G+F ST D + G+ +F L+ + + TR G F V Sbjct: 61 GTNPKQVGLGMNVASIDTIHTQGAFQSTQKASDLGVSGNGFFILKEGKNLFYTRAGAFDV 120 Query: 109 TDDGSLVSASGKYPVLDMA 127 D LV+ + + Sbjct: 121 DSDRHLVNPANGMRIQGWM 139 Score = 78.8 bits (192), Expect = 7e-13, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 46/141 (32%), Gaps = 5/141 (3%) Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 G + + S+S K + D + + + V + + + + L S Sbjct: 299 GSYTDSVTQFADSSSTKAIIQDGYGMGYMENYEIDQNGVIVGIYSNGIRRELGKIALASF 358 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQ 218 G + ++ + ++ G LE +N + + MI + Sbjct: 359 MNPGGLAKSGDTNFVETSNSGQVRIGETGLAGLGDIRSGVLEMANVDLAEQFTDMIVTQR 418 Query: 219 KFNSITTLIDENEKSMLEAIR 239 F + I +++ + E +R Sbjct: 419 GFQANAKTITTSDQLLQELVR 439 >gi|216264643|ref|ZP_03436635.1| flagellar hook protein FlgE [Borrelia burgdorferi 156a] gi|215981116|gb|EEC21923.1| flagellar hook protein FlgE [Borrelia burgdorferi 156a] Length = 442 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 55/139 (39%), Gaps = 12/139 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ + R+ V +N++N +T+GF+ +V F +++ + Sbjct: 1 MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIGFKKGRVNFQDMISQSISGASRPTDARG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 Q + G+F ST D + G+ +F L+ + + TR G F V Sbjct: 61 GTNPKQVGLGMNVASIDTIHTQGAFQSTQKASDLGVSGNGFFILKEGKNLFYTRAGAFDV 120 Query: 109 TDDGSLVSASGKYPVLDMA 127 D LV+ + + Sbjct: 121 DSDRHLVNPANGMRIQGWM 139 Score = 78.4 bits (191), Expect = 9e-13, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 46/141 (32%), Gaps = 5/141 (3%) Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 G + + S+S K + D + + + V + + + + L S Sbjct: 299 GSYTDSITQFADSSSTKAIIQDGYGMGYMENYEIDQNGVIVGIYSNGIRRDLGKIALASF 358 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQ 218 G + ++ + ++ G LE +N + + MI + Sbjct: 359 MNPGGLAKSGDTNFVETSNSGQVRIGETGLAGLGDIRSGVLEMANVDLAEQFTDMIVTQR 418 Query: 219 KFNSITTLIDENEKSMLEAIR 239 F + I +++ + E +R Sbjct: 419 GFQANAKTITTSDQLLQELVR 439 >gi|224437581|ref|ZP_03658537.1| flagellar hook protein FlgE [Helicobacter cinaedi CCUG 18818] Length = 718 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 63/179 (35%), Gaps = 15/179 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G++ A + L ++N++N +TVGF+ + F +++ I Sbjct: 1 MLRSLWSGVSGMQAHQIALDVESNNIANVNTVGFKYSRASFVDMLSQIKLIATSPYKNGL 60 Query: 49 -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGR 105 + V G+ +T + D A+EGD +F + RG TR+G Sbjct: 61 GGQNDFSIGLGVGIDATTKVFSQGNTQNTDVKTDIAIEGDGFFIISPDRGTTHNYTRNGE 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 F +G+LV+ G + + + + + I + Sbjct: 121 FLFDANGNLVTTGGYVVQGWVRPPLEAAESGTMSDFDFFRVDNTGPVRNIQIDPGMVMP 179 Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 14/128 (10%), Positives = 41/128 (32%), Gaps = 5/128 (3%) Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + + + + + + + +A + L + + G + Sbjct: 588 SETYAINQNGYQAGDLMDIRFDSNGSLLGAFSNGRSIALAQVALANFANNTGLQAEGGNV 647 Query: 177 ISPNIPPTPLEDLSGVTVKRG-----FLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 S + T +RG LE SN + + Q+I + + F + + + ++ Sbjct: 648 FSQTGNSGEPMIGAANTGRRGGVSGSKLEMSNVDLSRSLTQLIVVQRGFQANSKAVTTSD 707 Query: 232 KSMLEAIR 239 + + + Sbjct: 708 QILNTLLN 715 >gi|88858143|ref|ZP_01132785.1| flagellar hook protein [Pseudoalteromonas tunicata D2] gi|88819760|gb|EAR29573.1| flagellar hook protein [Pseudoalteromonas tunicata D2] Length = 492 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 38/170 (22%), Positives = 63/170 (37%), Gaps = 5/170 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61 SFNI L+ A ++ L A+N++N +T GF+ + +F++V N Q V + Sbjct: 2 SFNIALSGLKAAQKDLDVTANNIANVNTYGFKESRAEFADVFSTSLFSNAKTQNGEGVLT 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII---LTRDGRFKVTDDGSLVSAS 118 GS + T LD A+ G+ +F TR G FK+ D LV+A Sbjct: 62 QVVAQQFHQGSLLFTSNALDMAINGNGFFVTTDSPLSRDFTYTRSGAFKLDADNRLVTAG 121 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 G + + + + S S ++ Sbjct: 122 GDFLQGLPVNEDGSVKSVSLSTTAPIQIPDSAGSPSATGAVDMSFNLDSN 171 Score = 68.7 bits (166), Expect = 6e-10, Method: Composition-based stats. Identities = 15/98 (15%), Positives = 39/98 (39%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLED 201 + + I+ + L QG + N+ +P+ + + +++ G LE Sbjct: 393 YSNGDAQAISKVALARFPNEQGLTQIGNTSWTPSRESGEALAGEPDSGTFGSIRSGTLEQ 452 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +N N E+ +I + F + + ++ N + ++ Sbjct: 453 ANVNLTGELVDLIAAQRNFQANSRALEVNNQISQNILQ 490 >gi|218249383|ref|YP_002374806.1| flagellar hook protein FlgE [Borrelia burgdorferi ZS7] gi|218164571|gb|ACK74632.1| flagellar hook protein FlgE [Borrelia burgdorferi ZS7] Length = 442 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 55/139 (39%), Gaps = 12/139 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ + R+ V +N++N +T+GF+ +V F +++ + Sbjct: 1 MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIGFKKGRVNFQDMISQSISGASRPTDARG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 Q + G+F ST D + G+ +F L+ + + TR G F V Sbjct: 61 GTNPKQVGLGMNVASIDTIHTQGAFQSTQKASDLGVSGNGFFILKEGKNLFYTRAGAFDV 120 Query: 109 TDDGSLVSASGKYPVLDMA 127 D LV+ + + Sbjct: 121 DSDRHLVNPANGMRIQGWM 139 Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 46/141 (32%), Gaps = 5/141 (3%) Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 G + + S+S K + D + + + V + + + + L S Sbjct: 299 GSYTDSITQFADSSSTKAIIQDGYGMGYMENYEIDQNGVIVGIYSNGIRRDLGKIALASF 358 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQ 218 G + ++ + ++ G LE +N + + MI + Sbjct: 359 MNPGGLAKSGDTNFVETSNSGQVRIGETGLAGLGDIRSGVLEMANVDLAEQFTDMIVTQR 418 Query: 219 KFNSITTLIDENEKSMLEAIR 239 F + I +++ + E +R Sbjct: 419 GFQANAKTITTSDQLLQELVR 439 >gi|46906933|ref|YP_013322.1| flagellar basal body rod protein FlgG [Listeria monocytogenes serotype 4b str. F2365] gi|46880199|gb|AAT03499.1| putative flagellar basal-body rod protein [Listeria monocytogenes serotype 4b str. F2365] Length = 259 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 42/251 (16%), Positives = 87/251 (34%), Gaps = 16/251 (6%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV--------VGAIKNDID 53 IG A + Q + ++N++N T GF+ ++ + G + + Sbjct: 1 MKGLYIGAAGMMNYMQHIQVHSNNVANAQTPGFKFDQLTSEVISRNKVNYQNGPVARQVG 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFAL------EGDAWFALESPRGIILTRDGRFK 107 V +++ GS T + DF + +G +F I L+R G+F Sbjct: 61 TIDYGVRPAATHINLTAGSSYITNRDRDFFMQDTDPTQGSNFFITAKNGEISLSRGGQFH 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 G L +A G + + ++ G+ + +G V +Q Sbjct: 121 SDQFGFLRTADGANLLSATGEAIQVGQKTSIRSEANGDLYNAETGQYLGRLGTKFVSANQ 180 Query: 168 G--FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225 V+ + N T ++ G +E SN + EM Q++ + + Sbjct: 181 ADSLVKDGEGRLHVNGINTMNLPAGQGIIQNGVIETSNVDLGVEMVQLMDNQRMVQASKN 240 Query: 226 LIDENEKSMLE 236 +++ +K + Sbjct: 241 VVNMFDKVYDK 251 >gi|15594628|ref|NP_212417.1| flagellar hook protein FlgE [Borrelia burgdorferi B31] gi|223889009|ref|ZP_03623600.1| flagellar hook protein FlgE [Borrelia burgdorferi 64b] gi|226321601|ref|ZP_03797127.1| flagellar hook protein FlgE [Borrelia burgdorferi Bol26] gi|2494528|sp|Q44767|FLGE_BORBU RecName: Full=Flagellar hook protein flgE gi|1165267|gb|AAA85606.1| FlgE [Borrelia burgdorferi] gi|2688183|gb|AAC66665.1| flagellar hook protein (flgE) [Borrelia burgdorferi B31] gi|223885825|gb|EEF56924.1| flagellar hook protein FlgE [Borrelia burgdorferi 64b] gi|226232790|gb|EEH31543.1| flagellar hook protein FlgE [Borrelia burgdorferi Bol26] Length = 442 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 55/139 (39%), Gaps = 12/139 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ + R+ V +N++N +T+GF+ +V F +++ + Sbjct: 1 MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIGFKKGRVNFQDMISQSISGASRPTDARG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 Q + G+F ST D + G+ +F L+ + + TR G F V Sbjct: 61 GTNPKQVGLGMNVASIDTIHTQGAFQSTQKASDLGVSGNGFFILKEGKNLFYTRAGAFDV 120 Query: 109 TDDGSLVSASGKYPVLDMA 127 D LV+ + + Sbjct: 121 DSDRHLVNPANGMRIQGWM 139 Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 46/141 (32%), Gaps = 5/141 (3%) Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 G + + S+S K + D + + + V + + + + L S Sbjct: 299 GSYTDSITQFADSSSTKAIIQDGYGMGYMENYEIDQNGVIVGIYSNGIRRDLGKIALASF 358 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQ 218 G + ++ + ++ G LE +N + + MI + Sbjct: 359 MNPGGLAKSGDTNFVETSNSGQVRIGETGLAGLGDIRSGVLEMANVDLAEQFTDMIVTQR 418 Query: 219 KFNSITTLIDENEKSMLEAIR 239 F + I +++ + E +R Sbjct: 419 GFQANAKTITTSDQLLQELVR 439 >gi|317121822|ref|YP_004101825.1| flagellar hook-basal body protein [Thermaerobacter marianensis DSM 12885] gi|315591802|gb|ADU51098.1| flagellar hook-basal body protein [Thermaerobacter marianensis DSM 12885] Length = 406 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 35/142 (24%), Positives = 59/142 (41%), Gaps = 14/142 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ + R+ + +N++N +TVGF++ +V F E+ Sbjct: 1 MMRSLYAGISGLQNHQLRMDVIGNNIANVNTVGFKSSRVTFKELFNQTLRGAAAPAGPTR 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRF 106 Q A + + G+ TG D A++GD +F L+ G TR G F Sbjct: 61 GGTNPIQIGLGTALAGIDVIHQPGNPQVTGVATDLAIQGDGFFVLQDAAGGYAYTRAGDF 120 Query: 107 KVTDDGSLVSASGKYPVLDMAS 128 ++ G LV+A G + A Sbjct: 121 RLDAAGYLVNADGLRVLGWQAQ 142 Score = 89.5 bits (220), Expect = 4e-16, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 33/92 (35%), Gaps = 4/92 (4%) Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE----DLSGVTVKRGFLEDSNANSM 207 + IA + L S G +R N N + G LE SN + Sbjct: 312 TQPIAQVALASFANPAGLLRDGNLYWESNNSGVARIGVAGTGGRGALTPGALEMSNVDLS 371 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E MI + F + + +I +++ + E + Sbjct: 372 REFVDMIVTQRGFQANSRVITTSDEMLQELVN 403 >gi|317051681|ref|YP_004112797.1| flagellar hook-basal body protein [Desulfurispirillum indicum S5] gi|316946765|gb|ADU66241.1| flagellar hook-basal body protein [Desulfurispirillum indicum S5] Length = 1341 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 38/207 (18%), Positives = 71/207 (34%), Gaps = 6/207 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M S G++ + ++ + + +N+SN +T G++ + F++V+ V Sbjct: 1 MLQSMYAGVSGLVNHQRSMDIIGNNISNVNTFGYKKARAGFADVMSISIGGSGVNPMQVG 60 Query: 61 SGKEYLS----KEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVS 116 G S G ++ D A+ G +F + + TR+G F +G +V+ Sbjct: 61 IGTRVNSTNLIFSQGGIEASNKSTDMAIAGRGFFVVSNGAQNFFTRNGNFTFNKEGMMVT 120 Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 G V+ + I G I + + S G + E SG Sbjct: 121 PDG--LVMQGRMATQNQYGEFTINPTTVVGNIQIPVGIKSPASPTSNVELGGNLNAEASG 178 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSN 203 + P + F E N Sbjct: 179 TILSTPVLRTAADGNKDLSTLFNEQGN 205 Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 34/93 (36%), Gaps = 5/93 (5%) Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANS 206 + +A + L QG + NS + T+ LE SN + Sbjct: 1246 SRPLAQLTLADFTNPQGLSKVGNSLFVSTNASGQPNYAAPGSAGFGTIISNSLEMSNVDL 1305 Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E QMI + + F + + +I ++ + E + Sbjct: 1306 SMEFTQMIIVERGFQANSRIISTSDSMIQEVLN 1338 >gi|152965624|ref|YP_001361408.1| hypothetical protein Krad_1658 [Kineococcus radiotolerans SRS30216] gi|151360141|gb|ABS03144.1| protein of unknown function DUF1078 domain protein [Kineococcus radiotolerans SRS30216] Length = 462 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 34/151 (22%), Positives = 64/151 (42%), Gaps = 12/151 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G++ + + + V +N++N +T GF++ V F++ + + Sbjct: 1 MLRSMFSGVSGLRSHQTMMDVVGNNIANVNTAGFKSSSVVFADTLSQLTKAAGAPTDAAA 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 + Q V + GS +TG D L+GD FA++ G +R+G F + Sbjct: 61 GTNPAQVGLGVRVNAITQNMTQGSAQATGKSTDLMLQGDGMFAIQQGDGTFYSRNGSFTL 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEI 139 +GS+V+ G Y + A + +I Sbjct: 121 DANGSVVTNDGGYVMGWKADAAGAVNTNGQI 151 Score = 79.9 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 43/124 (34%), Gaps = 5/124 (4%) Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 PV D A + V + + + + + S + S G + NS S + Sbjct: 336 NPVADGAPIGTLTGFSFGTDGVITGNYSNGYKQTLGQIAIASFNNSAGLRKEGNSLYSVS 395 Query: 181 IPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 ++ G LE SN + E +I + F + + +I +++ + Sbjct: 396 TNSGQPVFGIAGSAGRGSILAGSLEMSNVDLSAEFTNLILAQRGFQANSKVITSSDELLQ 455 Query: 236 EAIR 239 + + Sbjct: 456 DLVN 459 >gi|47091645|ref|ZP_00229441.1| flagellar basal-body rod protein, putative [Listeria monocytogenes str. 4b H7858] gi|254824038|ref|ZP_05229039.1| flagellar basal body rod protein FlgG [Listeria monocytogenes FSL J1-194] gi|254932038|ref|ZP_05265397.1| flagellar basal body rod protein FlgG [Listeria monocytogenes HPB2262] gi|47019964|gb|EAL10701.1| flagellar basal-body rod protein, putative [Listeria monocytogenes str. 4b H7858] gi|293583591|gb|EFF95623.1| flagellar basal body rod protein FlgG [Listeria monocytogenes HPB2262] gi|293593267|gb|EFG01028.1| flagellar basal body rod protein FlgG [Listeria monocytogenes FSL J1-194] gi|328467251|gb|EGF38331.1| flagellar basal body rod protein FlgG [Listeria monocytogenes 1816] gi|328475645|gb|EGF46394.1| flagellar basal body rod protein FlgG [Listeria monocytogenes 220] gi|332311107|gb|EGJ24202.1| Flagellar basal body rod protein [Listeria monocytogenes str. Scott A] Length = 259 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 42/251 (16%), Positives = 87/251 (34%), Gaps = 16/251 (6%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV--------VGAIKNDID 53 IG A + Q + ++N++N T GF+ ++ + G + + Sbjct: 1 MKGLYIGAAGMMNYMQHIQVHSNNVANAQTPGFKFDQLTSEVISRNKVNYQNGPVARQVG 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFAL------EGDAWFALESPRGIILTRDGRFK 107 V +++ GS T + DF + +G +F I L+R G+F Sbjct: 61 TIDYGVRPAATHINLTAGSSYITNRDRDFFMQDTDPTQGSNFFITAKNGEISLSRGGQFH 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 G L +A G + + ++ G+ + +G V +Q Sbjct: 121 SDQFGFLRTADGANLLSATGEAIQVGQKTSIRAEANGDLYNAETGQYLGRLGTKFVSANQ 180 Query: 168 G--FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225 V+ + N T ++ G +E SN + EM Q++ + + Sbjct: 181 ADSLVKDGEGRLHVNGINTMNLPAGQGIIQNGVIETSNVDLGVEMVQLMDNQRMVQASKN 240 Query: 226 LIDENEKSMLE 236 +++ +K + Sbjct: 241 VVNMFDKVYDK 251 >gi|315452912|ref|YP_004073182.1| flagellar hook protein FlgE [Helicobacter felis ATCC 49179] gi|315131964|emb|CBY82592.1| flagellar hook protein FlgE [Helicobacter felis ATCC 49179] Length = 718 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 35/197 (17%), Positives = 65/197 (32%), Gaps = 15/197 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G+ A + L ++N++N +T GF+ + F +++ + Sbjct: 1 MLRSLWSGVNGMQAHQIALDIESNNIANVNTTGFKYSRASFVDMLSQVKLIATAPYKNGL 60 Query: 49 -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGR 105 + V G+ +T + D A+EGD +F + RG+ TR G Sbjct: 61 AGQNDFSVGLGVGVDATTKIFSQGNLQNTDVKTDLAIEGDGFFVISPDRGVTRNFTRSGE 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 F +G+LV+ G + + E + + I + Sbjct: 121 FLFDAEGNLVTTGGYVVQGWVRDPKDMGSKGSETDMLKIDNTKPLQNIRIDPGMVMPARS 180 Query: 166 SQGFVRRENSGISPNIP 182 S R N + Sbjct: 181 SSKISMRANLNAGRHAE 197 Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 15/128 (11%), Positives = 38/128 (29%), Gaps = 5/128 (3%) Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + + + + + K +A + + S G S Sbjct: 588 SETYAIEQNGYQAGDLMDVRFNGEGALLGSFSNGKTLALAQVAMASFANDAGLQAIGGSV 647 Query: 177 ISPNIPPTPLEDLSGVTVKRGF-----LEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 S + T +RG LE SN + + +I + + F + + + ++ Sbjct: 648 FSETGNSGKALIGAANTGRRGAVSGSKLESSNVDLSRSLTNLIVVQRGFQANSKAVTTSD 707 Query: 232 KSMLEAIR 239 + + + Sbjct: 708 QILNTLLN 715 >gi|116872071|ref|YP_848852.1| flagellar basal body rod protein FlgG [Listeria welshimeri serovar 6b str. SLCC5334] gi|116740949|emb|CAK20069.1| flagellar basal-body rod protein, putative [Listeria welshimeri serovar 6b str. SLCC5334] Length = 259 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 40/251 (15%), Positives = 83/251 (33%), Gaps = 16/251 (6%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV--------VGAIKNDID 53 IG A + Q + ++N++N T GF+ ++ + + + Sbjct: 1 MKGLYIGAAGMMNYMQHIQVHSNNVANAQTPGFKFDQLTSEVISRNKVNYQNSPVARQVG 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFAL------EGDAWFALESPRGIILTRDGRFK 107 V +++ GS T + DF + +G +F I L+R G+F Sbjct: 61 TIDYGVRPAATHINLTAGSSYITNRDRDFFMQDTNPEQGSNFFLTAKNGEISLSRGGQFH 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 G L ++ G + + + + + +G V Q Sbjct: 121 SDQFGFLRTSDGANVLSATGEAIQVGQKTSIRAEANGDLFNADTNQYLGRIGTKFVSADQ 180 Query: 168 G--FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225 V+ + N T ++ G LE SN + EM Q++ + + Sbjct: 181 ADSLVKDGEGRLHVNGINTINLPAGQGNIQNGVLETSNVDLGIEMVQLMDNQRMVQASKN 240 Query: 226 LIDENEKSMLE 236 +++ +K + Sbjct: 241 VVNMFDKVYDK 251 >gi|225181603|ref|ZP_03735044.1| protein of unknown function DUF1078 domain protein [Dethiobacter alkaliphilus AHT 1] gi|225167711|gb|EEG76521.1| protein of unknown function DUF1078 domain protein [Dethiobacter alkaliphilus AHT 1] Length = 408 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 56/139 (40%), Gaps = 12/139 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 MQ S G++ + ++ + +N++N +T F+ +V+F +++ Sbjct: 1 MQRSLFTGVSGLRNHQTKMDVIGNNIANVNTTAFKAGRVRFQDILSQNIRGASAPQDGRG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 Q ++ GS STG D A++G +F + +RDG F + Sbjct: 61 GINPAQVGLGMSVASIDTIHTPGSLQSTGRPTDLAIQGSGFFVMSDGANEFYSRDGAFSL 120 Query: 109 TDDGSLVSASGKYPVLDMA 127 DG LV+ + + L Sbjct: 121 GSDGDLVNGANGFKPLGWQ 139 Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats. Identities = 20/141 (14%), Positives = 46/141 (32%), Gaps = 6/141 (4%) Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-IATMGLYSV 163 + +V S ++ + G + V + + L S Sbjct: 265 AVDFNNMSQVVGHSNAQVRYQDGFPAGELTEFTIGKTGVISGIYTNGLVVELGQIALASF 324 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLS-----GVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 D +G ++ + + ++ G LE SN + YE +MI ++ Sbjct: 325 DNPEGLMKAAGNMYQVSSNSGQARVGGAGLEGRGVIETGTLEMSNVDLSYEFTEMITTSR 384 Query: 219 KFNSITTLIDENEKSMLEAIR 239 F + + +I ++ + E + Sbjct: 385 GFQANSRVITTSDDLLQEVVN 405 >gi|217965220|ref|YP_002350898.1| flagellar basal body rod protein [Listeria monocytogenes HCC23] gi|290893977|ref|ZP_06556952.1| flagellar basal body rod protein FlgG [Listeria monocytogenes FSL J2-071] gi|217334490|gb|ACK40284.1| flagellar basal body rod protein [Listeria monocytogenes HCC23] gi|290556423|gb|EFD89962.1| flagellar basal body rod protein FlgG [Listeria monocytogenes FSL J2-071] gi|307570221|emb|CAR83400.1| flagellar basal-body rod protein, putative [Listeria monocytogenes L99] Length = 259 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 42/251 (16%), Positives = 87/251 (34%), Gaps = 16/251 (6%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV--------VGAIKNDID 53 IG A + Q + ++N++N T GF+ ++ + G + + Sbjct: 1 MKGLYIGAAGMMNYMQHIQVHSNNVANAQTPGFKFDQLTSEVISRNKVNYQNGPVTRQVG 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFAL------EGDAWFALESPRGIILTRDGRFK 107 V +++ GS T + DF + +G +F I L+R G+F Sbjct: 61 TIDYGVRPAATHINLTAGSSYITNRDRDFFMQDTDPTQGSNFFITAKNGEISLSRGGQFH 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 G L +A G + + ++ G+ + +G V +Q Sbjct: 121 SDQFGFLRTADGANLLSATGEAIQVGQKTSIRAEANGDLYNAETGQYLGRLGTKFVSANQ 180 Query: 168 G--FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225 V+ + N T ++ G +E SN + EM Q++ + + Sbjct: 181 ADSLVKDGEGRLHVNGINTMNLPAGQGIIQNGVIETSNVDLGVEMVQLMDNQRMVQASKN 240 Query: 226 LIDENEKSMLE 236 +++ +K + Sbjct: 241 VVNMFDKVYDK 251 >gi|296126058|ref|YP_003633310.1| fagellar hook-basal body protein [Brachyspira murdochii DSM 12563] gi|296017874|gb|ADG71111.1| fagellar hook-basal body protein [Brachyspira murdochii DSM 12563] Length = 441 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 33/152 (21%), Positives = 60/152 (39%), Gaps = 12/152 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-------- 52 M S G++ + R+ V +N++N +T GF+ +V F +++ + Sbjct: 1 MMRSLFAGVSGLQNHQTRMDVVGNNIANVNTYGFKRGRVTFKDMISQSLSGAAKPQEDRG 60 Query: 53 ----DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 Q + G+ TG D A++G+ +F + TR+G F + Sbjct: 61 GINPQQVGLGMMVATIDTIHTQGALQVTGVNTDLAIQGEGFFIEKRGNNSYYTRNGAFSL 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIF 140 DG LV+ S Y V +V + E+ Sbjct: 121 DRDGYLVNPSIGYKVQGWNAVLNPETGEMELN 152 Score = 75.3 bits (183), Expect = 7e-12, Method: Composition-based stats. Identities = 17/122 (13%), Positives = 38/122 (31%), Gaps = 5/122 (4%) Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 D ++ + + + K + + L + + G + ++ + Sbjct: 316 IEQDGYTMGMLEGFSFDDSGQITGVFTNGNRKTLGQVALAKFNNAGGLEKAGDTLFVASN 375 Query: 182 PPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 ++K G LE SN + + MI + F S I ++ + E Sbjct: 376 NSGAANIGTAAAEGRGSLKAGALEMSNVDLSEQFTDMIVTQRGFQSNARTITTADQMLQE 435 Query: 237 AI 238 I Sbjct: 436 VI 437 >gi|229011065|ref|ZP_04168259.1| Flagellar basal-body rod protein flgG [Bacillus mycoides DSM 2048] gi|228750237|gb|EEM00069.1| Flagellar basal-body rod protein flgG [Bacillus mycoides DSM 2048] Length = 257 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 44/255 (17%), Positives = 83/255 (32%), Gaps = 15/255 (5%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53 IG + Q ++ ++N++N T GF+ + + +I Sbjct: 1 MNGLYIGSMGMMNYMQHINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGSATNIG 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDF-----ALEGDAWFALESPRGIILTRDGRFKV 108 V +++ G+ T + DF A ++F LTRDG F + Sbjct: 61 SVDYAVVPAATHVNLVQGNVQMTNSATDFFLDDGAAGTSSFFVTSKNDERFLTRDGSFTL 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD--MS 166 D L +ASG + + + IA + +VD + Sbjct: 121 NSDRYLQTASGAFVMGENNERIRIPEGAKVAVQADGTLYDEVTQNNIARLQTKTVDVETN 180 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 V+REN + V+ LE+SN + EM ++ + + + Sbjct: 181 ARLVQRENKSFTLAEGNVADLPNGTGAVRNHMLENSNVDMTKEMADLMTNQKMIQASQRI 240 Query: 227 IDENEKSMLEAIRNI 241 + +K + I Sbjct: 241 MTSFDKIYEKEANEI 255 >gi|224534234|ref|ZP_03674812.1| flagellar hook protein FlgE [Borrelia spielmanii A14S] gi|224514336|gb|EEF84652.1| flagellar hook protein FlgE [Borrelia spielmanii A14S] Length = 442 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 55/139 (39%), Gaps = 12/139 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ + R+ V +N++N +T+GF+ +V F +++ + Sbjct: 1 MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIGFKKGRVNFQDMISQSISGASRPTDVRG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 Q + G+F ST D + G+ +F L+ + + TR G F V Sbjct: 61 GTNPKQVGLGMNVAAIDTIHTQGAFQSTQKASDLGVSGNGFFILKEGKNLFYTRAGAFDV 120 Query: 109 TDDGSLVSASGKYPVLDMA 127 D LV+ + + Sbjct: 121 DSDRHLVNPANGMRIQGWM 139 Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 45/141 (31%), Gaps = 5/141 (3%) Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 G + + S+S K + D + + + V + + + + L S Sbjct: 299 GSYTDSITQFADSSSTKAIIQDGYGMGYMESYEIDQNGVIVGVYSNGIRRDLGKIALASF 358 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQ 218 G + ++ ++ G LE +N + + MI + Sbjct: 359 MNPGGLAKSGDTNFVETSNSGQARIGETGLAGLGDIRSGVLEMANVDLAEQFTDMIVTQR 418 Query: 219 KFNSITTLIDENEKSMLEAIR 239 F + I +++ + E +R Sbjct: 419 GFQANAKTITTSDQLLQELVR 439 >gi|205373385|ref|ZP_03226189.1| flagellar hook protein FlgE [Bacillus coahuilensis m4-4] Length = 426 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 32/145 (22%), Positives = 58/145 (40%), Gaps = 12/145 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S G++ + +L + +N++N +T GF+ +V F +++ + Sbjct: 1 MLRSMYSGISGMKNAQTKLDVIGNNIANVNTYGFKKGRVTFQDLMNQTMSGATTPTENRG 60 Query: 56 -------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 + GS +TG LD A+ GD +F + + + + TR G F + Sbjct: 61 GQNAKQIGLGGTIASIDIISTQGSLQTTGRSLDVAISGDGYFVVRNGQNEMYTRAGNFYL 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQI 133 +GSLV +G A I Sbjct: 121 DSNGSLVDGNGNLIQGYQADANGVI 145 Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 37/91 (40%), Gaps = 4/91 (4%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL----SGVTVKRGFLEDSNANSMY 208 + I+ + + + + G + + + + + ++ G LE SN + Sbjct: 333 QAISQLVMATFSNAGGLLSQGGNTFTASNNSGLPNYGIANEGRGAIQSGSLEMSNVDLSE 392 Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E +MI + F + T +I +++ + E + Sbjct: 393 EFTEMITAQRSFQANTRIITTSDEILQELVN 423 >gi|300117306|ref|ZP_07055096.1| flagellar basal body rod protein FlgG [Bacillus cereus SJ1] gi|298725141|gb|EFI65793.1| flagellar basal body rod protein FlgG [Bacillus cereus SJ1] Length = 257 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 44/255 (17%), Positives = 86/255 (33%), Gaps = 15/255 (5%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53 IG + QR++ ++N++N T GF+ + + +I Sbjct: 1 MNGLYIGSMGMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIG 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDA-----WFALESPRGIILTRDGRFKV 108 V +++ G+ T + DF L+ +F LTRDG F + Sbjct: 61 SVDYAVVPAATHVNLVQGNIQMTNSATDFFLDDGTAGTASFFVTSKNNETFLTRDGSFTL 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV--DMS 166 D L + SG + + + + IA + +V + + Sbjct: 121 NSDRYLQTTSGAFVMGENNERIRIPEGAKVAVQADGTLYDAVTQNNIARLQTKTVGAEAN 180 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 ++REN + TVK LE+SN + EM ++ + ++ + Sbjct: 181 NRLMQRENKSFTLAEGNIADLPNGVGTVKNYMLENSNVDMTKEMADLMTDQKMISASQRV 240 Query: 227 IDENEKSMLEAIRNI 241 + +K + I Sbjct: 241 MTSFDKIYEKEANEI 255 >gi|16799765|ref|NP_470033.1| flagellar basal body rod protein FlgG [Listeria innocua Clip11262] gi|16413142|emb|CAC95922.1| lin0690 [Listeria innocua Clip11262] gi|313620081|gb|EFR91589.1| flagellar basal body rod protein FlgG [Listeria innocua FSL S4-378] Length = 259 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 41/251 (16%), Positives = 84/251 (33%), Gaps = 16/251 (6%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV--------VGAIKNDID 53 IG A + Q + ++N++N T GF+ ++ + + + Sbjct: 1 MKGLYIGAAGMMNYMQHIQVHSNNVANAQTPGFKFDQLTSEVISRNKVNYQNSPVARQVG 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFAL------EGDAWFALESPRGIILTRDGRFK 107 V +++ GS T + DF + +G +F I L+R G+F Sbjct: 61 TIDYGVRPAATHINLTAGSSYITNRDRDFFMQDTNPEQGSNFFITAKNGEISLSRGGQFH 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 G L +A G + + ++ + + +G V Q Sbjct: 121 TDQFGFLRTADGANILSSTGEAIQVGQKTAIRAEANGDLYNAETNQYLGRLGTKFVSADQ 180 Query: 168 --GFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225 V+ + N T ++ G LE SN + EM Q++ + + Sbjct: 181 VDSLVKDGEGRLHVNGINTMNLPAGQGNIQNGVLETSNVDLGVEMVQLMDNQRMVQASKN 240 Query: 226 LIDENEKSMLE 236 +++ +K + Sbjct: 241 VVNMFDKVYDK 251 >gi|256833233|ref|YP_003161960.1| hypothetical protein Jden_2019 [Jonesia denitrificans DSM 20603] gi|256686764|gb|ACV09657.1| protein of unknown function DUF1078 domain protein [Jonesia denitrificans DSM 20603] Length = 397 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 26/138 (18%), Positives = 52/138 (37%), Gaps = 12/138 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA------------I 48 M S G++ + + L +N++N +T G++ + +F + + Sbjct: 1 MLRSLFSGISGMRSHQTMLDVTGNNIANVNTTGYKASQTQFKDTLSQMVQNAGAAQGGVG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 + Q V + G+ +TG D + GD +F ++ TR G F Sbjct: 61 GTNPAQVGLGVQVSGITTNFTQGAAQTTGRSTDMMISGDGFFVVQKDGQQFYTRAGAFDF 120 Query: 109 TDDGSLVSASGKYPVLDM 126 +G+ V+ G Y + Sbjct: 121 DSNGNFVTPEGAYVMGWP 138 Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 12/92 (13%), Positives = 34/92 (36%), Gaps = 5/92 (5%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSM 207 + + + L + G ++ + ++ + + G LE SN + Sbjct: 303 QAVGKISLATFANPAGLEKQGGNLYGTSVNSGDAQVGEPGMGGRGGLVGGALEMSNVDLS 362 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E +I + F + + +I +++ + E + Sbjct: 363 QEFTNLIIAQRGFQANSRVITTSDEVLQELVN 394 >gi|51894131|ref|YP_076822.1| flagellar hook protein [Symbiobacterium thermophilum IAM 14863] gi|51857820|dbj|BAD41978.1| flagellar hook protein [Symbiobacterium thermophilum IAM 14863] Length = 418 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 38/171 (22%), Positives = 68/171 (39%), Gaps = 7/171 (4%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN------DIDQK 55 S G++ + + R+ + +N++N +T GF+ +V F++V + + Q Sbjct: 1 MRSLYSGVSGIRSHQTRMDVIGNNIANVNTTGFKASRVTFTDVFNQTLSSGSALTNPQQI 60 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSL 114 VA G L + G+F TG D A+ G F L+ + I+ +R G F DG L Sbjct: 61 GLGVAVGSTDLITDEGAFQMTGRAFDLAISGAGLFVLKGANDEILYSRAGMFDWNPDGIL 120 Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 ++ + V +V I + D + AT + Sbjct: 121 INPALGMKVQGWMAVDGVIGRTDRATMQDIQIVRGTVSLPQATTKVTFKGN 171 Score = 75.3 bits (183), Expect = 7e-12, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 49/145 (33%), Gaps = 7/145 (4%) Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG--KVIATMG 159 R GS +A + P+ + + +GE G +++A + Sbjct: 271 RKITQAYDASGSGGTARSTVELDTRDGRPMGSLEAVYVNELGEIIGRYTNGDSQLLAQIA 330 Query: 160 LYSVDMSQGFVRRENSGISP-NIPPTPL----EDLSGVTVKRGFLEDSNANSMYEMGQMI 214 L + G ++ NS + P T+ G LE SN + + +MI Sbjct: 331 LAHFNNMAGLIKEGNSTFAESPASGVPQIGTAGTGGRGTLVPGNLEGSNVDLAGQFTEMI 390 Query: 215 HLTQKFNSITTLIDENEKSMLEAIR 239 + + + ++ + + E I Sbjct: 391 LTQRGYQASARVVSTADDMLQEIIN 415 >gi|187918157|ref|YP_001883720.1| flagellar hook protein FlgE [Borrelia hermsii DAH] gi|119861005|gb|AAX16800.1| flagellar hook protein FlgE [Borrelia hermsii DAH] Length = 442 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 30/139 (21%), Positives = 53/139 (38%), Gaps = 12/139 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ + R+ V +N++N +T+GF+ +V F +++ + Sbjct: 1 MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIGFKKGRVNFQDMISQSISGASRPTDGRG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 Q ++ GSF ST D + G+ +F L TR G F V Sbjct: 61 GVNPKQVGLGMSVATIDTIHTQGSFQSTQKASDLGISGNGFFILRDGNNSFYTRAGAFDV 120 Query: 109 TDDGSLVSASGKYPVLDMA 127 D LV+ + + Sbjct: 121 DSDRRLVNPANGMKIQGWM 139 Score = 78.8 bits (192), Expect = 6e-13, Method: Composition-based stats. Identities = 23/166 (13%), Positives = 51/166 (30%), Gaps = 5/166 (3%) Query: 79 ELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDE 138 D + + L G + + +++ K V D + + + Sbjct: 274 TFDVVNANAGEVGEQQTVNLRLGNVGSYTDSITQFADASTTKAIVQDGYGMGYMENYEID 333 Query: 139 IFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-----T 193 V + + I + L S G + ++ S T Sbjct: 334 QNGVITGVYSNGIRRDIGKIALASFVNPGGLAKAGDTNFSETSNSGQARIGETGFAGLGT 393 Query: 194 VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 ++ G LE +N + + MI + F + I +++ + E +R Sbjct: 394 IRAGVLEMANVDLAEQFTDMIVTQRGFQANAKTITTSDQLLQELVR 439 >gi|111115108|ref|YP_709726.1| flagellar hook protein FlgE [Borrelia afzelii PKo] gi|216263795|ref|ZP_03435789.1| flagellar hook protein FlgE [Borrelia afzelii ACA-1] gi|110890382|gb|ABH01550.1| flagellar hook protein [Borrelia afzelii PKo] gi|215979839|gb|EEC20661.1| flagellar hook protein FlgE [Borrelia afzelii ACA-1] Length = 442 Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 54/139 (38%), Gaps = 12/139 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ + R+ V +N++N +T+GF+ +V F +++ + Sbjct: 1 MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIGFKKGRVNFQDMISQSISGASRPTDVRG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 Q + G+F ST D + G+ +F L+ + TR G F V Sbjct: 61 GTNPKQVGLGMNVAAIDTIHTQGAFQSTQKASDLGVSGNGFFILKEGGNLFYTRAGAFDV 120 Query: 109 TDDGSLVSASGKYPVLDMA 127 D LV+ + + Sbjct: 121 DSDRHLVNPANGMRIQGWM 139 Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 14/123 (11%), Positives = 38/123 (30%), Gaps = 5/123 (4%) Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 + D + + + + + + + + L S G + ++ Sbjct: 317 IIQDGYGMGYMENYEIDQNGIIVGIYSNGIRRDLGKIALASFMNPGGLAKSGDTNFVETS 376 Query: 182 PPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 ++ G LE +N + + MI + F + I +++ + E Sbjct: 377 NSGQARIGETGLAGLGDIRSGVLEMANVDLAEQFTDMIVTQRGFQANAKTITTSDQLLQE 436 Query: 237 AIR 239 +R Sbjct: 437 LVR 439 >gi|312876506|ref|ZP_07736489.1| fagellar hook-basal body protein [Caldicellulosiruptor lactoaceticus 6A] gi|311796717|gb|EFR13063.1| fagellar hook-basal body protein [Caldicellulosiruptor lactoaceticus 6A] Length = 494 Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 66/155 (42%), Gaps = 15/155 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S ++A A + R+ + DN++N +TVGF++ +V F+ V ++ Sbjct: 1 MMRSMFSSISALRAHQTRMDVIGDNIANVNTVGFKSSRVTFASVFASVLKSASAPDTASG 60 Query: 49 --KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGR 105 ++ Q V+ ++ GS T D A+EGD +F + + TR G Sbjct: 61 RGGSNPMQIGLGVSVASVDMNMTRGSLQRTDNPTDLAIEGDGFFVVGGDGKAPRFTRAGN 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF 140 F + G+LV+A+G + M + + Sbjct: 121 FSLDKMGNLVTATGLNVLGWMYDPENKQIDTTKSP 155 Score = 89.5 bits (220), Expect = 4e-16, Method: Composition-based stats. Identities = 29/223 (13%), Positives = 70/223 (31%), Gaps = 23/223 (10%) Query: 24 DNM--SNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELD 81 DN+ +NT+ + F +++F + G + N + S K + + S + Sbjct: 285 DNIEGANTNFIAF--GRIEF-DSKGQVINVQLEGAQNQNSNKFTIKFKNNSLDEITFDTS 341 Query: 82 FALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFN 141 + + + + + S + +D I + Sbjct: 342 IGNTDETLNIFKFDYIKQYSLGSSIRTKKISGYAAGSLQGFNVDATGKIIGVYSN----- 396 Query: 142 VGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKR 196 ++I + + + G R ++ E S T+ + Sbjct: 397 --------GLNQIIGQIAVATFANPAGLQRIGDNLYINTPNSGDPEIGIPGTGSRGTIFQ 448 Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G LE SN + E MI + + + +I +++ + + + Sbjct: 449 GTLEMSNVDLAKEFTDMIVTQRGYQANARVITASDELLQDLVN 491 >gi|224532235|ref|ZP_03672867.1| flagellar hook protein FlgE [Borrelia valaisiana VS116] gi|224511700|gb|EEF82106.1| flagellar hook protein FlgE [Borrelia valaisiana VS116] Length = 442 Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 55/139 (39%), Gaps = 12/139 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ + R+ V +N++N +T+GF+ +V F +++ + Sbjct: 1 MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIGFKKGRVNFQDMISQSISGASRPTDTRG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 Q + G+F ST D + G+ +F L+ + + TR G F V Sbjct: 61 GTNPKQVGLGMNVAAIDTIHTQGAFQSTQKASDLGVSGNGFFILKEGKNLFYTRAGAFDV 120 Query: 109 TDDGSLVSASGKYPVLDMA 127 D LV+ + + Sbjct: 121 DSDRHLVNPANGMRIQGWM 139 Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 45/141 (31%), Gaps = 5/141 (3%) Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 G + + S+S K + D + + + V + + + + L S Sbjct: 299 GSYTDSITQFADSSSTKAIIQDGYGMGYMENYEIDQNGVIVGIYSNGIRRDLGKIALASF 358 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQ 218 G + ++ ++ G LE +N + + MI + Sbjct: 359 MNPGGLAKSGDTNFVETSNSGQARIGETGLAGLGDIRSGVLEMANVDLAEQFTDMIVTQR 418 Query: 219 KFNSITTLIDENEKSMLEAIR 239 F + I +++ + E +R Sbjct: 419 GFQANAKTITTSDQLLQELVR 439 >gi|269792937|ref|YP_003317841.1| hypothetical protein Taci_1328 [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100572|gb|ACZ19559.1| protein of unknown function DUF1078 domain protein [Thermanaerovibrio acidaminovorans DSM 6589] Length = 636 Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 29/153 (18%), Positives = 50/153 (32%), Gaps = 14/153 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-------- 52 M S G++ + L V +N++N +T GF+ V F +++ Sbjct: 1 MLRSLYSGVSGVKGHQTYLDVVGNNIANVNTTGFKRSNVLFQDLLYQNVRGAMAPDAGQG 60 Query: 53 ------DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106 Q G G+ TG DF + GD +F +++ TR G Sbjct: 61 RGGINPMQVGLGSMVGAVETIHTQGTMQYTGNRNDFGISGDGYFVVKTGADTFYTRAGSA 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEI 139 + G+LV + Y + Sbjct: 121 TMDSGGNLVMSGMGYIYQGYKMSKDPTDPTKYV 153 Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats. Identities = 20/136 (14%), Positives = 41/136 (30%), Gaps = 7/136 (5%) Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 T GS + Y V + G ++ + + L QG Sbjct: 500 TQYGSAFTTKAYYQDGYPMGVLQDYAVSSDGTVQGVYSNGQRQ--PLYKLALALFANPQG 557 Query: 169 FVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223 + + S + + + + LE SN + E +I + F + Sbjct: 558 LFKESGTVFSQSANSGIAQIVKPMEGGAGRIMGSNLEMSNVDLSQEFVNLIVAQRGFQAN 617 Query: 224 TTLIDENEKSMLEAIR 239 +I +++ + E I Sbjct: 618 ARVITTSDQVLEELIN 633 >gi|160901599|ref|YP_001567180.1| hypothetical protein Pmob_0108 [Petrotoga mobilis SJ95] gi|160359243|gb|ABX30857.1| protein of unknown function DUF1078 domain protein [Petrotoga mobilis SJ95] Length = 702 Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 35/186 (18%), Positives = 62/186 (33%), Gaps = 12/186 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G+ + +L VA+N++N +TVG++ + F + + + Sbjct: 1 MLRSMYSGITGLRNFQDQLDIVANNIANVNTVGYKGSRATFQTTLFQTLSAGNAPQNQLG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 Q GS +STG D ++G+ +F L G TR G F Sbjct: 61 GTNPMQIGLGSQLASIDKLMTQGSPMSTGKATDLMIQGEGFFILSDGIGQYYTRAGNFTR 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 +G V + + + Q + N G+V+A V ++ Sbjct: 121 DYNGFFVDPASGMKLQGWTAKIDQEGNRTIDTNDPIGDIQISSGQVMAAKQTSFVRLAHN 180 Query: 169 FVRREN 174 Sbjct: 181 LNAGAG 186 Score = 79.5 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 15/91 (16%), Positives = 31/91 (34%), Gaps = 5/91 (5%) Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLEDSNANSMY 208 + + L + + +G NS + + ++ G LE SN + Sbjct: 609 PLGQVALATFNNPEGLSATGNSMYAMSSNSGLPQIGVSGVGGRGSINPGALEMSNVDLAE 668 Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E MI + F + + I + + E + Sbjct: 669 EFTNMIIAQRGFQANSRSITTADAILNELVN 699 >gi|293115683|ref|ZP_05792615.2| flagellar hook protein FlgE [Butyrivibrio crossotus DSM 2876] gi|292808788|gb|EFF67993.1| flagellar hook protein FlgE [Butyrivibrio crossotus DSM 2876] Length = 440 Score = 99 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 31/149 (20%), Positives = 55/149 (36%), Gaps = 15/149 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + G+A + ++ + +N++N +TVGF++ V FS+V + + Sbjct: 1 MMRALYSGVAGLKTHQTKMDVIGNNIANVNTVGFKSQSVTFSDVFYQTTQNASGANAETG 60 Query: 61 S---------------GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGR 105 E G ST D + GD+ F + + T+ G Sbjct: 61 MGGTNAKQIGLGSTVSSITTKVSESGGSQSTSNPFDLMINGDSMFIVNNAGTNYFTKAGN 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIP 134 F V G+LV++ G A+ I Sbjct: 121 FTVDSAGTLVTSQGYAVQGWKANEEGVIM 149 Score = 75.7 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 15/99 (15%), Positives = 36/99 (36%), Gaps = 6/99 (6%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSG------VTVKRGFLE 200 + K+IA + + + G + ++ + + + + G LE Sbjct: 339 YDNGDSKIIAQIAVANFKNLSGLEKVGDNLFAETLNSGNFDGIGDDITEDGGYFSPGVLE 398 Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E MI + + + + +I ++ + E I Sbjct: 399 MSNVDLAAEFTDMITTQRGYQANSRIITVSDTLLEELIN 437 >gi|121612241|ref|YP_999769.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni 81-176] gi|157414368|ref|YP_001481624.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni 81116] gi|167004743|ref|ZP_02270501.1| flagellar hook protein flgE [Campylobacter jejuni subsp. jejuni 81-176] gi|87249055|gb|EAQ72017.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni 81-176] gi|157385332|gb|ABV51647.1| flagellar hook protein flgE [Campylobacter jejuni subsp. jejuni 81116] gi|307747010|gb|ADN90280.1| Flagellar hook protein [Campylobacter jejuni subsp. jejuni M1] gi|315931630|gb|EFV10595.1| flagella basal body rod family protein [Campylobacter jejuni subsp. jejuni 327] Length = 545 Score = 99 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 43/217 (19%), Positives = 80/217 (36%), Gaps = 9/217 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI----KNDIDQKI 56 M SF G++ + + A+N++N +T GF+ +F ++ + Q Sbjct: 1 MMNSFYNGISGVKSNSFGIDITANNIANVNTTGFKYSDAQFKDIFYTTITTQSTNPAQGG 60 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLV 115 + + E GS +++ E D AL+G +F + G TR+G F+ +G LV Sbjct: 61 YGSGAASSQVVFEQGSPVASDGEFDVALQGKGFFGVLGADGNAYYTRNGSFRRDANGYLV 120 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 + G + + M I D + + + + S G + + Sbjct: 121 DSYGNFVLGTMNPAFTGINYSDRVAGLMGDYLNTGTPVNNGFTVNSNNSFSIGTTASQGA 180 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQ 212 P P + V G L N N+ E+ + Sbjct: 181 IKVPVNMYLPPQVTQNVK-WSGSL---NTNTTTEVVK 213 Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 44/124 (35%), Gaps = 7/124 (5%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 D + + K ++ + LY+ QG V ++ + Sbjct: 419 QQDGVAEGFFEQYNISDDGSIVAQFSNGKNAIVGKLALYNFINEQGLVAMGDNIFAATAN 478 Query: 183 P-------TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 + ++ K GFLE SN + E+ +I + F++ + I +++ + Sbjct: 479 SGDASFIMKDGQVVNTAKFKGGFLEQSNVDLSAELSNLIVTQKAFDASSKSITTSDQMIQ 538 Query: 236 EAIR 239 +AI Sbjct: 539 KAIN 542 >gi|86154050|ref|ZP_01072251.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni HB93-13] gi|85842464|gb|EAQ59678.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni HB93-13] Length = 545 Score = 99 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 43/217 (19%), Positives = 80/217 (36%), Gaps = 9/217 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI----KNDIDQKI 56 M SF G++ + + A+N++N +T GF+ +F ++ + Q Sbjct: 1 MMNSFYNGISGVKSNSFGIDITANNIANVNTTGFKYSDAQFKDIFYTTITTQSTNPAQGG 60 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLV 115 + + E GS +++ E D AL+G +F + G TR+G F+ +G LV Sbjct: 61 YGSGAASSQVVFEQGSPVASDGEFDVALQGKGFFGVLGADGNAYYTRNGSFRRDANGYLV 120 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 + G + + M I D + + + + S G + + Sbjct: 121 DSYGNFVLGTMNPAFTGINYSDRVAGLMGDYLNTGTPVNNGFTVNSNNSFSIGTTASQGA 180 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQ 212 P P + V G L N N+ E+ + Sbjct: 181 IKVPVNMYLPPQVTQNVK-WSGSL---NTNTTTEVVK 213 Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 44/124 (35%), Gaps = 7/124 (5%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 D + + K ++ + LY+ QG V ++ + Sbjct: 419 QQDGIAEGFFEQYNISDDGSIVAQFSNGKNAIVGKLALYNFINEQGLVAMGDNIFAATAN 478 Query: 183 P-------TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 + ++ K GFLE SN + E+ +I + F++ + I +++ + Sbjct: 479 SGDASFIMKDGQVVNTAKFKGGFLEQSNVDLSAELSNLIVTQKAFDASSKSITTSDQMIQ 538 Query: 236 EAIR 239 +AI Sbjct: 539 KAIN 542 >gi|306820921|ref|ZP_07454541.1| flagellar basal body and hook protein [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551035|gb|EFM39006.1| flagellar basal body and hook protein [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 372 Score = 99 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 42/206 (20%), Positives = 79/206 (38%), Gaps = 8/206 (3%) Query: 44 VVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG--IILT 101 +V + I S + ++ G+ T + +LEG+ +F + I + Sbjct: 166 IVPEARKSIGTINSGNLIDRVMINFNQGAQERTENPMHISLEGNGFFKVRLDSTDAIKYS 225 Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-----EISQKGKVIA 156 R G F + + G L G L I++P G + + IA Sbjct: 226 RSGVFTLDNSGVLKDFLGNIV-LSEDGSEIKVPTNSRSLEFKSDGSVVSLNSDGQREQIA 284 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + L + + + +S + +E G V +G+LE SN +++ EM MI + Sbjct: 285 KLALVDIYNKEDMQKYGHSYMQMTNNAQAIEHPFGGKVLQGYLEKSNVSAIDEMVDMIQM 344 Query: 217 TQKFNSITTLIDENEKSMLEAIRNIA 242 + F S +I+ ++ M +A I Sbjct: 345 YRGFESDQKVINAYDQIMQKAANEIG 370 Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 28/201 (13%), Positives = 61/201 (30%), Gaps = 4/201 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M +A + ++ +++N+SN DT F+ + + ++ Sbjct: 1 MFRGIYTASSAMQTKQNQIEIISNNISNVDTTAFKKDVGVTEAFSEKLLMKRENVEGYLR 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + + + + + D + + LE G + D+G L + + Sbjct: 61 ANSNNVKVSNKTLKNGLVKTDIEIS-RGYLTLEDKNGKGYYKSASVVRDDEGYLRTVYNE 119 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 Y D+ + ++ +GEI+ G V + E Sbjct: 120 YNSNDITKFGAYLLDENSNRINVPEGEITVDNNGNIVSGGRQV---AKLIVPEARKSIGT 176 Query: 181 IPPTPLEDLSGVTVKRGFLED 201 I L D + +G E Sbjct: 177 INSGNLIDRVMINFNQGAQER 197 >gi|289548122|ref|YP_003473110.1| fagellar hook-basal body protein [Thermocrinis albus DSM 14484] gi|289181739|gb|ADC88983.1| fagellar hook-basal body protein [Thermocrinis albus DSM 14484] Length = 454 Score = 99 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 38/205 (18%), Positives = 74/205 (36%), Gaps = 17/205 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M SF + A + +DN++N +T+GF+ + F +V+ ++ ++ Sbjct: 1 MLRSFFNAVTGLNAYRTWMDITSDNLANVNTIGFKASRPIFQDVISSVTVGLNTVTNTIK 60 Query: 54 --QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG--IILTRDGRFKVT 109 + V +G+F TG D A++G F L+ P TRDG F+++ Sbjct: 61 TTTYGAGVLIDSTQKIWTIGNFKQTGINTDLAIQGRGLFILKDPISGAHYYTRDGEFRLS 120 Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169 DG +V+++G ++ + G + G+ + Sbjct: 121 RDGFMVNSAGLKLQG------FRVDENGRTVGTGLEDIKVVPQLEPKPTGVINFLQPSNL 174 Query: 170 VRRENSGISPNIPPTPLEDLSGVTV 194 +P P P T+ Sbjct: 175 NATATEPPNPFNPLDPSSYNYRYTL 199 Score = 87.6 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 18/158 (11%), Positives = 45/158 (28%), Gaps = 4/158 (2%) Query: 82 FALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFN 141 + + +P +V+AS + + + Sbjct: 298 WRIYVGTSLQSGAPNPGQPIPTSFVTQHASDFVVTASQNGYARGDLVDVYVLSEDGAVVG 357 Query: 142 VGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLED 201 V G+ + + + + +++ + + PT + V+ G LE Sbjct: 358 VYSNGK----SLPLYRVAVAVFSDPEELIKKGANLYTSISTPTVMVPGGAEKVRSGMLEM 413 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E +I + + + I + E + Sbjct: 414 SNVDIATEFVNLISAQRAYQANAKTITATNAVLDETVN 451 >gi|158320521|ref|YP_001513028.1| hypothetical protein Clos_1488 [Alkaliphilus oremlandii OhILAs] gi|158140720|gb|ABW19032.1| protein of unknown function DUF1078 domain protein [Alkaliphilus oremlandii OhILAs] Length = 448 Score = 99 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 30/140 (21%), Positives = 54/140 (38%), Gaps = 16/140 (11%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S +++ A + ++ + +N++N +TVGF+ +V F EV Sbjct: 1 MMRSMYSAVSSLKAHQLKMDVIGNNIANVNTVGFKGTRVTFQEVFSQTLRGAGRAQEGGR 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF---ALESPRGIILTRDG 104 Q + GS STG D + G+ +F + TR G Sbjct: 61 GGTNPQQVGLGINVNSMDTFHTRGSVESTGYNTDLMINGEGFFVVSDTQGGLQKSYTRAG 120 Query: 105 RFKVTDDGSLVSASGKYPVL 124 F + +G+L++ G Y + Sbjct: 121 AFGLDANGNLITPDGYYVLG 140 Score = 86.1 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 35/92 (38%), Gaps = 5/92 (5%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSM 207 +++ +GL + G ++ + + T + G +E SN + Sbjct: 354 QILGRVGLANFKNPAGLLKTGGNMYRETSNSGEVMFGYAGTGGFGALNPGAIEMSNVDIS 413 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E MI + F + + +I +++ + E + Sbjct: 414 REFTDMITTQRGFQANSRIITTSDEMLQEIVN 445 >gi|15639714|ref|NP_219164.1| flagellar hook protein FlgE [Treponema pallidum subsp. pallidum str. Nichols] gi|189025952|ref|YP_001933724.1| flagellar hook protein FlgE [Treponema pallidum subsp. pallidum SS14] gi|6015169|sp|O07884|FLGE_TREPA RecName: Full=Flagellar hook protein flgE gi|2196893|gb|AAB61251.1| FlgE [Treponema pallidum] gi|3323028|gb|AAC65692.1| flagellar hook protein (flgE) [Treponema pallidum subsp. pallidum str. Nichols] gi|189018527|gb|ACD71145.1| flagellar hook protein [Treponema pallidum subsp. pallidum SS14] gi|291060091|gb|ADD72826.1| flagellar hook protein FlgE [Treponema pallidum subsp. pallidum str. Chicago] Length = 463 Score = 99 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 58/142 (40%), Gaps = 12/142 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50 M S G++ + R+ + +N++N +T GF+ +V F +++ + Sbjct: 1 MMRSLFSGVSGMQNHQTRMDVIGNNVANVNTTGFKRGRVNFQDLISQQLSAAARPNEEVG 60 Query: 51 --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 + + V G+ +TG D +++G +F L+S TR G F V Sbjct: 61 GVNPKEVGLGVLIASIDTVHTQGALQTTGINTDVSIQGSGFFVLKSGEKTFFTRAGAFGV 120 Query: 109 TDDGSLVSASGKYPVLDMASVP 130 + G+LV+ + V + Sbjct: 121 DNAGTLVNPANGMRVQGWMAQD 142 Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 22/162 (13%), Positives = 44/162 (27%), Gaps = 5/162 (3%) Query: 83 ALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNV 142 A DA + L G + T ++ K D ++ K + V Sbjct: 299 ANPDDAGQVTRHAFTLNLGEIGTARNTITQFAERSTTKAYRQDGYAMGYLENFKIDQSGV 358 Query: 143 GEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRG 197 + + I + L G + + + + G Sbjct: 359 ITGVYSNGVSQDIGQLALAGFANQGGLEKAGENTYVQSNNSGIANISTSGVMGKGKLIAG 418 Query: 198 FLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 LE SN + + MI + F + I ++ + + Sbjct: 419 TLEMSNVDLTDQFTDMIITQKGFQAGAKTIQTSDTMLDTVLS 460 >gi|227876747|ref|ZP_03994856.1| flagellar hook protein [Mobiluncus mulieris ATCC 35243] gi|306817694|ref|ZP_07451436.1| flagellar hook protein FlgE [Mobiluncus mulieris ATCC 35239] gi|227842644|gb|EEJ52844.1| flagellar hook protein [Mobiluncus mulieris ATCC 35243] gi|304649508|gb|EFM46791.1| flagellar hook protein FlgE [Mobiluncus mulieris ATCC 35239] Length = 466 Score = 99.6 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 40/209 (19%), Positives = 77/209 (36%), Gaps = 15/209 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50 M S G++ + L ++N++N +T GF++ +F + + Sbjct: 1 MLRSLFTGISGLSVHQTMLDVTSNNIANVNTTGFKSASTRFEDTFSQLVRSGAAPRLNER 60 Query: 51 ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 + Q V + G+ +TG LD + GD +F L+ G + TR+G F Sbjct: 61 GGMNPAQVGLGVKLQSITNNFTGGAAQNTGRNLDTMINGDGFFVLKKTNGTQVYTRNGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 + G +V+A G + A + + N+ S K T ++ +M Sbjct: 121 GLDAQGQVVAADGSFVQGWKADTKGIVNASGQPGNITLPLTQSMKANPT-TQVIFGGNMP 179 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVK 195 + + S +PN + + V Sbjct: 180 ADQLYNDPSMQNPNTAGNAKQFAQVLVVH 208 Score = 74.1 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 33/93 (35%), Gaps = 5/93 (5%) Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANS 206 + +A + S G + S + + + + G +E SN + Sbjct: 371 SRALAKIATASFSNPLGLEKAGASYFVESGNSGQPQIGEPGSGTRGAMTGGAIEMSNVDL 430 Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E +I + F + T +I +++ + E + Sbjct: 431 AAEFTNLILSQRGFQANTRVITTSDEILQELVS 463 >gi|153951334|ref|YP_001397315.1| flagellar hook protein [Campylobacter jejuni subsp. doylei 269.97] gi|152938780|gb|ABS43521.1| flagellar hook protein [Campylobacter jejuni subsp. doylei 269.97] Length = 545 Score = 99.6 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 47/218 (21%), Positives = 83/218 (38%), Gaps = 11/218 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI----KNDIDQKI 56 M SF G++ + + A+N++N +T GF+ +F ++ + Q Sbjct: 1 MMNSFYNGISGVKSNSFGIDITANNIANVNTTGFKYSDAQFKDIFYNTITTQSTNPAQGG 60 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLV 115 + + E GS I++ E D AL+G +F + G TR+G FK +G LV Sbjct: 61 YGSGAASSQVVFEQGSPIASDGEFDVALQGKGFFGVLEADGNAYYTRNGSFKRDANGYLV 120 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 + G + + M V + D + G G+ G + + + + Sbjct: 121 DSYGNFVLGTMNPVFTGMNYSDRV--AGLMGDYLNTGTPVNNGFTVNSNNPFSIGTTVSQ 178 Query: 176 GISPNIPPTPLEDLSGVTVK-RGFLEDSNANSMYEMGQ 212 G L VK G L N N++ E+ + Sbjct: 179 GAIKVPVNMYLPPQVTQNVKWSGSL---NTNTITEVVK 213 Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 7/124 (5%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 D + + K ++ + LY+ QG ++ + Sbjct: 419 QQDGVAEGFFEQYNISDDGSIVAQFSNGKNAIVGKLALYNFINEQGLAAMGDNIFAATAN 478 Query: 183 P-------TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 + ++ K GFLE SN + E+ +I + F++ + I +++ + Sbjct: 479 SGDASFIMKDGQVVNTAKFKGGFLEQSNVDLSTELSNLIVTQKAFDASSKSITTSDQMIQ 538 Query: 236 EAIR 239 +AI Sbjct: 539 KAIN 542 >gi|269976274|ref|ZP_06183270.1| flagellar hook protein FlgE [Mobiluncus mulieris 28-1] gi|269935603|gb|EEZ92141.1| flagellar hook protein FlgE [Mobiluncus mulieris 28-1] Length = 472 Score = 99.6 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 34/169 (20%), Positives = 65/169 (38%), Gaps = 14/169 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G++ + L ++N++N +T GF++ +F + + Sbjct: 1 MLRSLFTGISGLSVHQTMLDVTSNNIANVNTTGFKSASTRFEDTFSQLVKSGAAPRLNER 60 Query: 49 -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 + Q V + G+ +TG LD + GD +F L+ G + TR+G F Sbjct: 61 GGMNPAQVGLGVKLQSITNNFTGGAAQNTGRNLDTMINGDGFFVLKKTNGTQVYTRNGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI 155 + G +V+A G + MA +I + N+ + + Sbjct: 121 GLDAQGQVVAADGSFVQGWMADKKGKISASGQTQNLVLPLTQTFEANPT 169 Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 20/134 (14%), Positives = 42/134 (31%), Gaps = 5/134 (3%) Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170 G S +Y +D S E + + +A + S G Sbjct: 336 TGYAGVNSAQYETIDGNSAGTLTGFGVEADGTIRGTFSNGDTRALAKIATASFSNPLGLE 395 Query: 171 RRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225 + S + + + + G +E SN + E +I + F + T Sbjct: 396 KAGASYFVESGNSGQPQIGEPGSGTRGAMTGGAIEMSNVDLAAEFTNLILSQRGFQANTR 455 Query: 226 LIDENEKSMLEAIR 239 +I +++ + E + Sbjct: 456 VITTSDEILQELVS 469 >gi|86149558|ref|ZP_01067788.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni CF93-6] gi|85839826|gb|EAQ57085.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni CF93-6] Length = 545 Score = 99.6 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 43/217 (19%), Positives = 80/217 (36%), Gaps = 9/217 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI----KNDIDQKI 56 M SF G++ + + A+N++N +T GF+ +F ++ + Q Sbjct: 1 MMNSFYNGISGVKSNSFGIDITANNIANVNTTGFKYSDAQFKDIFYTTITTQSTNPAQGG 60 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLV 115 + + E GS +++ E D AL+G +F + G TR+G F+ +G LV Sbjct: 61 YGSGAASSQVVFEQGSPVASDGEFDVALQGKGFFGVLGADGNAYYTRNGSFRRDANGYLV 120 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 + G + + M I D + + + + S G + + Sbjct: 121 DSYGNFVLGTMNPAFTGINYSDRVAGLMGDYLNTGTPVNNGFTVNSNNSFSIGTTASQGA 180 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQ 212 P P + V G L N N+ E+ + Sbjct: 181 IKVPVNMYLPPQVTQNVK-WSGSL---NTNTTTEVVK 213 Score = 72.6 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 44/124 (35%), Gaps = 7/124 (5%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 D + + K ++ + LY+ QG V ++ + Sbjct: 419 QQDGVAEGFFEQYNISDDGSIVAQFSNGKNAIVGKLALYNFINEQGLVAMGDNIFAATAN 478 Query: 183 P-------TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 + ++ K GFLE SN + E+ +I + F++ + I +++ + Sbjct: 479 SGDASFIMKDGQVVNTAKFKGGFLEQSNVDLSAELSNLIVTQKAFDASSKSITTSDQMIQ 538 Query: 236 EAIR 239 +AI Sbjct: 539 KAIN 542 >gi|57237057|ref|YP_178069.1| flagellar hook protein [Campylobacter jejuni RM1221] gi|88597731|ref|ZP_01100964.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni 84-25] gi|205356434|ref|ZP_03223198.1| hypothetical protein Cj8421_0048 [Campylobacter jejuni subsp. jejuni CG8421] gi|218561735|ref|YP_002343514.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|57165861|gb|AAW34640.1| flagellar hook protein [Campylobacter jejuni RM1221] gi|88190035|gb|EAQ94011.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni 84-25] gi|112359441|emb|CAL34223.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|205345621|gb|EDZ32260.1| hypothetical protein Cj8421_0048 [Campylobacter jejuni subsp. jejuni CG8421] gi|315929148|gb|EFV08373.1| flagella basal body rod family protein [Campylobacter jejuni subsp. jejuni 305] Length = 545 Score = 99.6 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 43/217 (19%), Positives = 80/217 (36%), Gaps = 9/217 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI----KNDIDQKI 56 M SF G++ + + A+N++N +T GF+ +F ++ + Q Sbjct: 1 MMNSFYNGISGVKSNSFGIDITANNIANVNTTGFKYSDAQFKDIFYTTITTQSTNPAQGG 60 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLV 115 + + E GS +++ E D AL+G +F + G TR+G F+ +G LV Sbjct: 61 YGSGAASSQVVFEQGSPVASDGEFDVALQGKGFFGVLGADGNAYYTRNGSFRRDANGYLV 120 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 + G + + M I D + + + + S G + + Sbjct: 121 DSYGNFVLGTMNPAFTGINYSDRVAGLMGDYLNTGTPVNNGFTVNSNNSFSIGTTASQGA 180 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQ 212 P P + V G L N N+ E+ + Sbjct: 181 IKVPVNMYLPPQVTQNVK-WSGSL---NTNTTTEVVK 213 Score = 72.6 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 44/124 (35%), Gaps = 7/124 (5%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 D + + K ++ + LY+ QG V ++ + Sbjct: 419 QQDGVAEGFFEQYNISDDGSIVAQFSNGKNAIVGKLALYNFINEQGLVAMGDNIFAATAN 478 Query: 183 P-------TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 + ++ K GFLE SN + E+ +I + F++ + I +++ + Sbjct: 479 SGDASFIMKDGQVVNTAKFKGGFLEQSNVDLSAELSNLIVTQKAFDASSKSITTSDQMIQ 538 Query: 236 EAIR 239 +AI Sbjct: 539 KAIN 542 >gi|148926857|ref|ZP_01810535.1| flagellar hook protein flgE [Campylobacter jejuni subsp. jejuni CG8486] gi|145844434|gb|EDK21542.1| flagellar hook protein flgE [Campylobacter jejuni subsp. jejuni CG8486] Length = 545 Score = 99.6 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 43/217 (19%), Positives = 80/217 (36%), Gaps = 9/217 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI----KNDIDQKI 56 M SF G++ + + A+N++N +T GF+ +F ++ + Q Sbjct: 1 MMNSFYNGISGVKSNSFGIDITANNIANVNTTGFKYSDAQFKDIFYTTITTQSTNPAQGG 60 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLV 115 + + E GS +++ E D AL+G +F + G TR+G F+ +G LV Sbjct: 61 YGSGAASSQVVFEQGSPVASDGEFDVALQGKGFFGVLGADGNAYYTRNGSFRRDANGYLV 120 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 + G + + M I D + + + + S G + + Sbjct: 121 DSYGNFVLGTMNPAFTGINYSDRVAGLMGDYLNTGTPVNNGFTVNSNNSFSIGTTASQGA 180 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQ 212 P P + V G L N N+ E+ + Sbjct: 181 IKVPVNMYLPPQVTQNVK-WSGSL---NTNTTTEVVK 213 Score = 72.6 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 44/124 (35%), Gaps = 7/124 (5%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 D + + K ++ + LY+ QG V ++ + Sbjct: 419 QQDGVAEGFFEQYNISDDGSIVAQFSNGKNAIVGKLALYNFINEQGLVAMGDNIFAATAN 478 Query: 183 P-------TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 + ++ K GFLE SN + E+ +I + F++ + I +++ + Sbjct: 479 SGDASFIMKDGQVVNTAKFKGGFLEQSNVDLSAELSNLIVTQKAFDASSKSITTSDQMIQ 538 Query: 236 EAIR 239 +AI Sbjct: 539 KAIN 542 >gi|119953082|ref|YP_945291.1| flagellar hook protein FlgE [Borrelia turicatae 91E135] gi|119861853|gb|AAX17621.1| flagellar hook protein FlgE [Borrelia turicatae 91E135] Length = 442 Score = 99.6 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 53/139 (38%), Gaps = 12/139 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ + R+ V +N++N +T+GF+ +V F +++ + Sbjct: 1 MMRSLYSGVSGLQNHQTRMDVVGNNIANVNTIGFKKGRVNFQDMISQSISGASRPTDGRG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 Q ++ GSF ST D + G+ +F L TR G F V Sbjct: 61 GVNPKQVGLGMSVATIDTIHTQGSFQSTQKASDLGISGNGFFILRDGNNSFYTRAGAFDV 120 Query: 109 TDDGSLVSASGKYPVLDMA 127 + LV+ + + Sbjct: 121 DSNRCLVNPANGMRIQGWM 139 Score = 78.8 bits (192), Expect = 7e-13, Method: Composition-based stats. Identities = 20/155 (12%), Positives = 50/155 (32%), Gaps = 5/155 (3%) Query: 90 FALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEIS 149 + + L G + + +++ K + D + + + + + Sbjct: 285 VGEQQTINLRLGNVGSYTDSITQFADASTTKAIIQDGYGMGYMENYEIDQNGIIMGVYSN 344 Query: 150 QKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNA 204 + I + L S G + ++ S T++ G LE +N Sbjct: 345 GIRRDIGKIALASFVNPGGLAKVGDTNFSETSNSGQARIGETGLAGLGTIRAGVLEMANV 404 Query: 205 NSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + + MI + F + I +++ + E +R Sbjct: 405 DLAEQFTDMIVTQRGFQANAKTITTSDQLLQELVR 439 >gi|85058012|ref|YP_453714.1| flagellar basal-body rod protein FlgF [Sodalis glossinidius str. 'morsitans'] gi|84778532|dbj|BAE73309.1| flagellar basal-body rod protein FlgF [Sodalis glossinidius str. 'morsitans'] Length = 252 Score = 99.6 bits (246), Expect = 4e-19, Method: Composition-based stats. Identities = 45/252 (17%), Positives = 80/252 (31%), Gaps = 15/252 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A A + S A+N++N T GFR F + + V Sbjct: 1 MDRAIYTAMGAASAALTQQSVAANNLANAATTGFRAQLAAFRA--APVNGPTLATRTLVV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDG-----SL 114 G +G LD AL+ W A+ P G TR+GR ++ G + Sbjct: 59 PSVPGNDFSPGPINISGNNLDVALDQHGWLAVRLPDGGEAYTRNGRIEIDSAGGLRVQNY 118 Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174 + L + D +V G+ + I + L ++ ++ Sbjct: 119 LLLGADSQPLTVLPGAAVTFGPDGTLSVLGDGDEPKTLVQIGQLKLVRLE-PDSLRHDDS 177 Query: 175 SGI-----SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 + L + + G E SN + + M +MI + F +I Sbjct: 178 GLFNLTDTARAQRGAVLPADPTLRLTPGAFEGSNVSPVQTMVEMIGNARSFEMQMKVISN 237 Query: 230 NEKSMLEAIRNI 241 + A + Sbjct: 238 VNDNA-RAGNQL 248 >gi|213418946|ref|ZP_03352012.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 226 Score = 99.6 bits (246), Expect = 4e-19, Method: Composition-based stats. Identities = 40/230 (17%), Positives = 65/230 (28%), Gaps = 15/230 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V + + V Sbjct: 1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVDGLSLATRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTD------DGS 113 + G T LD AL+ D W +++ TR+G +V G Sbjct: 59 ASTPGADMTQGQLDYTSRPLDVALQQDGWLVVQAADGAEGYTRNGNIQVGPTGQLTIQGH 118 Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG----KVIATMGLYSVDMSQGF 169 V G + S + K++ G G Sbjct: 119 PVIGEGGPITVPEGSEITIAADGTISALNPGDPPNTVAPVGRLKLVKAEGNEVQRSDDGL 178 Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 R + L + + G LE SN + M MI ++ Sbjct: 179 FRLTAEAQAE--RGAVLAADPSIRIMSGVLEGSNVKPVEAMTDMIANARR 226 >gi|50403744|sp|P50611|FLGE_HELMU RecName: Full=Flagellar hook protein flgE Length = 454 Score = 99.6 bits (246), Expect = 4e-19, Method: Composition-based stats. Identities = 38/208 (18%), Positives = 66/208 (31%), Gaps = 15/208 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G++ A + L ++N++N +T GF+ + F +++ Sbjct: 1 MLRSLWSGVSGMQAHQVALDVESNNIANVNTTGFKYSRASFVDMISQTKLIATSPHKGGL 60 Query: 49 -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGR 105 + V GS +T + D A+EGD +F + + TRDG Sbjct: 61 GGQNDVSVGLGVNVNSTTKVFSQGSTQNTDVKTDLAIEGDGFFIISPDRGKTQNFTRDGE 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 F +G+LV+ G M + E + I + Sbjct: 121 FLFDANGNLVTNGGYVVQGWMKDDLRNAEKISEDDFFRVDTTKPIQNIQIDPAMMMPARA 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT 193 S R N ++ G T Sbjct: 181 SSNISLRANLNAGRHVDQVANVFGLGST 208 >gi|237751739|ref|ZP_04582219.1| flagellar hook protein FlgE [Helicobacter bilis ATCC 43879] gi|229373105|gb|EEO23496.1| flagellar hook protein FlgE [Helicobacter bilis ATCC 43879] Length = 718 Score = 99.6 bits (246), Expect = 4e-19, Method: Composition-based stats. Identities = 33/147 (22%), Positives = 56/147 (38%), Gaps = 15/147 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G++ A + L ++N++N +TVGF+ + F +++ + Sbjct: 1 MLRSLWSGVSGLQAHQVALDVESNNIANVNTVGFKYSRASFVDMLSQVKQIATSPYKNGL 60 Query: 49 -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGR 105 + V G+ +T + D A+EGD +F + RG TRDG Sbjct: 61 GGQNDFSVGMGVGINATTKVFSQGNTQNTDVKTDLAIEGDGFFIISRDRGETKNYTRDGE 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQ 132 F G+LV+ G Q Sbjct: 121 FLFDAKGNLVTNGGYVVQGWNRPPIDQ 147 Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 19/128 (14%), Positives = 44/128 (34%), Gaps = 5/128 (3%) Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + + + + + + + K +A +GL + S G N+ Sbjct: 588 SETYNIAQNGYNAGDLMDVRFDANGALLGAFSNGKTLALAQVGLANFANSAGLQAEGNNI 647 Query: 177 ISPNIPPTPLEDLSGVTVKRG-----FLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 S + T +RG LE SN + + Q+I + + F + + I ++ Sbjct: 648 FSETGNSGEPIIGAANTGRRGGVSGSKLEMSNVDLSRALTQLIVVQRGFQANSKAITTSD 707 Query: 232 KSMLEAIR 239 + + + Sbjct: 708 QILNTLLS 715 >gi|289804043|ref|ZP_06534672.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 179 Score = 99.6 bits (246), Expect = 4e-19, Method: Composition-based stats. Identities = 30/177 (16%), Positives = 62/177 (35%), Gaps = 7/177 (3%) Query: 70 VGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGKYPVLDMAS 128 G+ T D A++G +F + P G TRDG F+V +G LV+A G + Sbjct: 2 QGNLSQTNNSKDVAIKGQGFFQVMLPDGTSAYTRDGSFQVDQNGQLVTAGGFQVQPAITI 61 Query: 129 VPIQIPQKD-EIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE 187 + V + + + L + G + Sbjct: 62 PANALSITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMNDTGLESIGENLYIETQSSGAPN 121 Query: 188 DLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + + + +G++E SN N E+ MI + + + + + ++ + + + Sbjct: 122 ESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMLQKLTQ 178 >gi|224498764|ref|ZP_03667113.1| flagellar basal body rod protein FlgG [Listeria monocytogenes Finland 1988] Length = 259 Score = 99.6 bits (246), Expect = 4e-19, Method: Composition-based stats. Identities = 41/251 (16%), Positives = 86/251 (34%), Gaps = 16/251 (6%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV--------VGAIKNDID 53 IG A + Q + ++N++N T GF+ ++ + G + + Sbjct: 1 MKGLYIGAAGMMNYMQHIQVHSNNVANAQTPGFKFDQLTSEVISRNKVNYQNGPVTRQVG 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFAL------EGDAWFALESPRGIILTRDGRFK 107 V +++ GS T + DF + +G +F I L+R G+F Sbjct: 61 TIDYGVRPAATHINLTAGSSYITNRDRDFFMQDTDPTQGSNFFITAKNGEISLSRGGQFH 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 G L +A G + + ++ + + +G V +Q Sbjct: 121 SDQFGFLRTADGANLLSTTGEAIQVGQKTSIRAEANGDLYNAETSQYLGRLGTKFVSANQ 180 Query: 168 G--FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225 V+ + N T ++ G +E SN + EM Q++ + + Sbjct: 181 ADSLVKDGEGRLHINGVNTMNLPAGQGIIQNGVIETSNVDLGVEMVQLMDNQRMVQASKN 240 Query: 226 LIDENEKSMLE 236 +++ +K + Sbjct: 241 VVNMFDKVYDK 251 >gi|323700469|ref|ZP_08112381.1| fagellar hook-basal body protein [Desulfovibrio sp. ND132] gi|323460401|gb|EGB16266.1| fagellar hook-basal body protein [Desulfovibrio desulfuricans ND132] Length = 516 Score = 99.6 bits (246), Expect = 4e-19, Method: Composition-based stats. Identities = 36/169 (21%), Positives = 69/169 (40%), Gaps = 5/169 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI---KNDIDQKISFVA 60 S G++ A Q S V++N++N+ T G++++ + F +V + + Q + V Sbjct: 6 SMYTGISGLQAQSQATSVVSNNLANSTTTGYKSVSIAFEDVFYSTVYAGGSLGQVGNGVT 65 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR--GIILTRDGRFKVTDDGSLVSAS 118 + G++ +T + D A+ GD ++ + P TRDG F + DG LV + Sbjct: 66 TSSLTTDYSQGAYETTNSVTDVAINGDGFYIVVDPDTGNTYYTRDGGFTLDTDGYLVDSH 125 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 G + +I + G+V + L S + Sbjct: 126 GNHVQGWETEDGSITGGLVDIQIDNSQSPPQATGEVAIQVNLDSTETDN 174 Score = 71.1 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 17/124 (13%), Positives = 37/124 (29%), Gaps = 5/124 (4%) Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 D + V E + + + + T L +QG + S Sbjct: 389 YTLSQDGYAPGELTDITINENGVIEGSYTNGQSQELYTFALADFTNTQGLYSEGGNLYSA 448 Query: 180 NIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 T+ LE SN ++ ++ +I + + + + +I + + Sbjct: 449 TTESGQALVGTPGSAGFGTIASNSLEQSNVDTATQLTNLIIIQAAYQANSKIITTADTLL 508 Query: 235 LEAI 238 AI Sbjct: 509 STAI 512 >gi|121533754|ref|ZP_01665581.1| protein of unknown function DUF1078 domain protein [Thermosinus carboxydivorans Nor1] gi|121307745|gb|EAX48660.1| protein of unknown function DUF1078 domain protein [Thermosinus carboxydivorans Nor1] Length = 420 Score = 99.6 bits (246), Expect = 4e-19, Method: Composition-based stats. Identities = 32/179 (17%), Positives = 63/179 (35%), Gaps = 14/179 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ + R+ + +N++N +T+GF+ +V F +++ Sbjct: 1 MMRSLFAGVSGLRNHQTRMDVIGNNIANVNTIGFKASRVNFQDILSQTMQGASSGIGNQG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106 Q V+ GSF TG + D +++G +F L + + TR G F Sbjct: 61 GTNPIQIGLGVSIASIDTIFTDGSFQPTGKQTDLSIQGKGFFVLSPDGGKTEVFTRAGNF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 G+ + Y V+ + D + + AT + + Sbjct: 121 DFDRLGNFIVPGTGYKVVGWKADSNGNIDTDPSKRTTIDIPVGTQMPAQATKAITFANN 179 Score = 84.9 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 35/254 (13%), Positives = 77/254 (30%), Gaps = 28/254 (11%) Query: 12 QLALEQRLSTVADNM----SNTDTVGFRTIKVKFSEV--------VGAIKNDIDQKISFV 59 A + T A+N+ +N TV + + + V D + Sbjct: 166 MPAQATKAITFANNLSADAANGTTV--KVSYDIYDNLGKRYTLPVVFTKTGDTTWDYTIS 223 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTD----DGSLV 115 + + ++ + ++ D A + + I ++ + V Sbjct: 224 NTSEYTVATLPATSVTGRLTFDAATGKLSSTTPPTVTTIDISYTTPAQKVSGIQLKFDQV 283 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKG-----EISQKGKVIATMGLYSVDMSQGFV 170 + G L + P E + G + K + +A + L + + G Sbjct: 284 TQYGGDTTLQIVDQDGYPPGSLEGVTIDPNGVIVGRFSNGKTRNLAQVALATFNNPAGLT 343 Query: 171 RRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225 + +S + + E + G LE SN + E MI + F + + Sbjct: 344 KIGDSLYAVSSNSGTPEIGVTGSGGRGKLNPGTLEMSNVDLAQEFSNMIITQRGFQANSK 403 Query: 226 LIDENEKSMLEAIR 239 +I ++ + E Sbjct: 404 IISVTDEMLQELAN 417 >gi|86151187|ref|ZP_01069402.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni 260.94] gi|85841534|gb|EAQ58781.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni 260.94] Length = 545 Score = 99.2 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 43/217 (19%), Positives = 80/217 (36%), Gaps = 9/217 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI----KNDIDQKI 56 M SF G++ + + A+N++N +T GF+ +F ++ + Q Sbjct: 1 MMNSFYNGISGVKSNSFGIDITANNIANVNTTGFKYSDAQFKDIFYTTITTQSTNPAQGG 60 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLV 115 + + E GS +++ E D AL+G +F + G TR+G F+ +G LV Sbjct: 61 YGSGAASSQVVFEQGSPVASDGEFDVALQGKGFFGVLGADGNAYYTRNGSFRRDANGYLV 120 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 + G + + M I D + + + + S G + + Sbjct: 121 DSYGNFVLGTMNPAFTGINYSDRVAGLMGDYLNTGTPVNNGFTVNSNNSFSIGTTASQGA 180 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQ 212 P P + V G L N N+ E+ + Sbjct: 181 IKVPVNMYLPPQVTQNVK-WSGSL---NTNTTTEVVK 213 Score = 72.2 bits (175), Expect = 6e-11, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 44/124 (35%), Gaps = 7/124 (5%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 D + + K ++ + LY+ QG V ++ + Sbjct: 419 QQDGVAEGFFEQYNISDDGSIVAQFSNGKNAIVGKLALYNFINEQGLVAMGDNIFAATAN 478 Query: 183 P-------TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 + ++ K GFLE SN + E+ +I + F++ + I +++ + Sbjct: 479 SGDASFIMKDGQVVNTAKFKGGFLEQSNVDLSAELSNLIVTQKAFDASSKSITTSDQMIQ 538 Query: 236 EAIR 239 +AI Sbjct: 539 KAIN 542 >gi|308050023|ref|YP_003913589.1| flagellar basal-body rod protein FlgF [Ferrimonas balearica DSM 9799] gi|307632213|gb|ADN76515.1| flagellar basal-body rod protein FlgF [Ferrimonas balearica DSM 9799] Length = 242 Score = 99.2 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 44/242 (18%), Positives = 95/242 (39%), Gaps = 5/242 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + + A+N++N +T GFR + A+ Sbjct: 1 MDKLLYTAASGANRVMEAQAIRANNLANLNTNGFRADLERVQAH--ALGGSGLNTRVMAQ 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + + + G +TG LD A++GD W +++ G TR G + DG V+ G+ Sbjct: 59 TQQSGANLSAGELNATGRTLDVAIQGDGWLTVQTADGEAYTRAGAMVLDADG-FVTIDGR 117 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF-VRRENSGISP 179 + + + ++ I G + +G +I +G + +G + + G+ Sbjct: 118 AVLGLDGPIQLPEYRELNIGEDGTISLLPAEGGLIEEVGQLKLVNPEGNALEKGTDGLMR 177 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 V + GFLE SN ++ E+ + L+++F L+ +++ ++ Sbjct: 178 LRDGEIAPQDEAVQLASGFLEGSNVTAVEELLASMSLSRQFELQVKLMKSA-ETLAQSGN 236 Query: 240 NI 241 + Sbjct: 237 RL 238 >gi|312792656|ref|YP_004025579.1| fagellar hook-basal body protein [Caldicellulosiruptor kristjanssonii 177R1B] gi|312179796|gb|ADQ39966.1| fagellar hook-basal body protein [Caldicellulosiruptor kristjanssonii 177R1B] Length = 494 Score = 99.2 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 66/155 (42%), Gaps = 15/155 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S ++A A + R+ + DN++N +TVGF++ +V F+ V ++ Sbjct: 1 MMRSMFSSISALRAHQTRMDVIGDNIANVNTVGFKSSRVTFASVFASVLKSASAPDTASG 60 Query: 49 --KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGR 105 ++ Q V+ ++ GS T D A+EGD +F + + TR G Sbjct: 61 RGGSNPMQIGLGVSVASVDMNMTRGSLQRTDNPTDLAIEGDGFFVVGGDGKAPRFTRAGN 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF 140 F + G+LV+A+G + M + + Sbjct: 121 FSLDKMGNLVTATGLNVLGWMYDPVNKQIDTTKSP 155 Score = 88.8 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 71/223 (31%), Gaps = 23/223 (10%) Query: 24 DNM--SNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELD 81 DN+ +NT+ + F +++F + G + N + S K + + S + Sbjct: 285 DNIEGANTNFIAF--GRIEF-DSKGQVINVQLEGAQNQNSNKFTIKFKNNSLDEITFDTS 341 Query: 82 FALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFN 141 + + + D + + S + +D I + Sbjct: 342 IGNTDETLNIFKFDYIKQYSLDSSIRAKKVSGYAAGSLQGFNVDATGKIIGVYSN----- 396 Query: 142 VGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKR 196 ++I + + + G R ++ E S T+ + Sbjct: 397 --------GLNQIIGQIAVATFANPAGLQRIGDNLYINTPNSGDPEIGIPGTGSRGTIFQ 448 Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G LE SN + E MI + + + +I +++ + + + Sbjct: 449 GTLEMSNVDLAKEFTDMIVTQRGYQANARVITASDELLQDLVN 491 >gi|254853114|ref|ZP_05242462.1| flagellar basal body rod protein FlgG [Listeria monocytogenes FSL R2-503] gi|300764493|ref|ZP_07074486.1| flagellar basal-body rod protein [Listeria monocytogenes FSL N1-017] gi|258606464|gb|EEW19072.1| flagellar basal body rod protein FlgG [Listeria monocytogenes FSL R2-503] gi|300514847|gb|EFK41901.1| flagellar basal-body rod protein [Listeria monocytogenes FSL N1-017] Length = 259 Score = 99.2 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 42/251 (16%), Positives = 88/251 (35%), Gaps = 16/251 (6%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV--------VGAIKNDID 53 IG A + Q + ++N++N T GF+ ++ + G++ + Sbjct: 1 MKGLYIGAAGMMNYMQHIQVHSNNVANAQTPGFKFDQLTSEVISRNKVNYQNGSVARQVG 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFAL------EGDAWFALESPRGIILTRDGRFK 107 V +++ GS T + DF + +G +F I L+R G+F Sbjct: 61 TIDYGVRPAATHINLTAGSSYITNRDRDFFMQDTDPTQGSNFFITAKNGEISLSRGGQFH 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 G L +A G + + ++ G+ + +G V +Q Sbjct: 121 SDQFGFLRTADGANLLSATGEAIQVGQKTSIRAEANGNLYNAETGQYLGRLGTKFVSANQ 180 Query: 168 G--FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225 V+ + N T ++ G +E SN + EM Q++ + + Sbjct: 181 ADSLVKDGEGRLHVNGINTMNLPAGQGIIQNGVIETSNVDLGVEMVQLMDNQRMVQASKN 240 Query: 226 LIDENEKSMLE 236 +++ +K + Sbjct: 241 VVNMFDKVYDK 251 >gi|313624924|gb|EFR94832.1| flagellar basal body rod protein FlgG [Listeria innocua FSL J1-023] Length = 259 Score = 99.2 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 41/251 (16%), Positives = 85/251 (33%), Gaps = 16/251 (6%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV--------VGAIKNDID 53 IG A + Q + ++N++N T GF+ ++ + + + Sbjct: 1 MKGLYIGAAGMMNYMQYIQVHSNNVANAQTPGFKFDQLTSEVISRNKVNYQNSPVAKQVG 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFAL------EGDAWFALESPRGIILTRDGRFK 107 V +++ GS T + DF + +G +F I L+R G+F Sbjct: 61 TIDYGVRPAATHINLTAGSSYITNRDRDFFMQDTNPEQGSNFFITAKNGEISLSRGGQFH 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 G L +A G + + ++ + + +G V +Q Sbjct: 121 TDQFGFLRTADGANILSSTGEAIQVGQKTAIRAEANGDLYNAETNQYLGRLGTKFVSANQ 180 Query: 168 --GFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225 V+ + N T ++ G LE SN + EM Q++ + + Sbjct: 181 VDNLVKDGEGRLHVNGINTMNLPAGQGNIQNGVLETSNVDLGVEMVQLMDNQRMVQASKN 240 Query: 226 LIDENEKSMLE 236 +++ +K + Sbjct: 241 VVNMFDKVYDK 251 >gi|207108815|ref|ZP_03242977.1| flagellar hook protein FlgE [Helicobacter pylori HPKX_438_CA4C1] Length = 167 Score = 99.2 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 60/165 (36%), Gaps = 15/165 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G+ A + L ++N++N +T GF+ + F +++ + Sbjct: 1 MLRSLWSGVNGMQAHQIALDIESNNIANVNTTGFKYSRASFVDMLSQVKLIATAPYKNGL 60 Query: 49 -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGR 105 + V G+ +T + D A++GD +F + RGI TRDG Sbjct: 61 AGQNDFSVGLGVGVDATTKIFSQGNIQNTDVKTDLAIQGDGFFIISPDRGITRNFTRDGE 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ 150 F GSLV+ G + + + + + G Sbjct: 121 FLFDSQGSLVTTGGLVVQGWVRNGSDTGNKGSDTDALKVDGSAIH 165 >gi|85859175|ref|YP_461377.1| flagellar hook protein [Syntrophus aciditrophicus SB] gi|85722266|gb|ABC77209.1| flagellar hook protein [Syntrophus aciditrophicus SB] Length = 518 Score = 99.2 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 32/128 (25%), Positives = 61/128 (47%), Gaps = 4/128 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA---IKNDIDQKIS 57 M + IG A ++++ + +N++N+ T+G+++ +F+ ++ + Q Sbjct: 12 MSNALWIGTTGLNASQRQMDIIGNNLANSSTLGYKSADTQFANMLSQSLTSGSGSFQVGQ 71 Query: 58 FVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVS 116 VA + GSF STG+ D A++G+ +F + + I TR G F + DG LV Sbjct: 72 GVAISSVNTKFDQGSFESTGSVTDMAIDGEGFFPVKDKEGAIYYTRAGAFVIDKDGYLVD 131 Query: 117 ASGKYPVL 124 +G Sbjct: 132 VNGYRVQG 139 Score = 75.3 bits (183), Expect = 8e-12, Method: Composition-based stats. Identities = 15/133 (11%), Positives = 40/133 (30%), Gaps = 4/133 (3%) Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170 G ++ K +D + + E + + + + + L + Sbjct: 383 TGYAATSVIKALEVDGYTSGVLKSLSVEKDGIISGIFTNGQTSDLGQVVLANFPNVGALR 442 Query: 171 RRENSGISPNIPPTP----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 + + N + LE SN + E MI+ + + + + Sbjct: 443 KIGSYFAETNFSGAAIINSPGTGGLGEIMSNSLEQSNTDVSMEFVNMINAQRAYQASARI 502 Query: 227 IDENEKSMLEAIR 239 I +++ + E + Sbjct: 503 ITTSDEMLTELMN 515 >gi|203287743|ref|YP_002222758.1| flagellar hook protein [Borrelia recurrentis A1] gi|201084963|gb|ACH94537.1| flagellar hook protein [Borrelia recurrentis A1] Length = 441 Score = 99.2 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 31/139 (22%), Positives = 52/139 (37%), Gaps = 12/139 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ + R+ V +N+SN +TVGF+ +V F +++ + Sbjct: 1 MMRSLYSGVSGLQNHQTRMDVVGNNISNVNTVGFKKGRVNFQDMISQSISGASRPTDGRG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 Q + GSF ST D + G+ +F L TR G F V Sbjct: 61 GVNPKQIGLGMTVATVDTIHTQGSFQSTQKASDLGISGNGFFILRDGDNSFYTRAGAFDV 120 Query: 109 TDDGSLVSASGKYPVLDMA 127 + LV+ + + Sbjct: 121 DSNRHLVNPANGMRIQGWM 139 Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 16/121 (13%), Positives = 39/121 (32%), Gaps = 5/121 (4%) Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183 + + + + V + + I + L S G + ++ + Sbjct: 318 QNGYGMGYMENYEIDQNGVITGVYSNGIRRTIGKIALASFVNPGGLAKAGDTNFTETSNS 377 Query: 184 TPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 T++ G LE +N + + MI + F + I +++ + E + Sbjct: 378 GQARIGETGFAGLGTIRSGVLEMANVDLAEQFTDMIVTQRGFQANAKTITTSDQLLQELV 437 Query: 239 R 239 R Sbjct: 438 R 438 >gi|300114798|ref|YP_003761373.1| flagellar basal-body rod protein FlgF [Nitrosococcus watsonii C-113] gi|299540735|gb|ADJ29052.1| flagellar basal-body rod protein FlgF [Nitrosococcus watsonii C-113] Length = 247 Score = 99.2 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 50/247 (20%), Positives = 102/247 (41%), Gaps = 7/247 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + Q + N++N +T GFR +F + + + + Sbjct: 1 MDRMLYVAMTGAQQTMQATAANNHNLANLNTTGFRADLSQFRSI--PVFGEGHPTRVYAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGD-AWFALESPR-GIILTRDGRFKVTDDGSLVSAS 118 + + + G STG ELD A++G+ W A+ SP G TR G K+T +G L + + Sbjct: 59 AERPGVDFTPGPLQSTGRELDVAVQGEGGWLAVRSPSGGEAYTRAGNLKITSNGILTTGA 118 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEI---SQKGKVIATMGLYSVDMSQGFVRRENS 175 G + + ++ I QK EI G ++ + V+ ++++ Sbjct: 119 GHPVLGEGGTIAIPPAQKIEIGADGTLSIRPLGQAANTLVVLDRIKLVNPPLDQLQKDEE 178 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 G+ + V++ G LE SNA+ + + +MI L +++ T ++ ++ Sbjct: 179 GLMTMANGGQAPADASVSLVSGKLEASNASGVDALVEMIALARQYEMQTKMMQTAKELDT 238 Query: 236 EAIRNIA 242 + + + Sbjct: 239 ASAQMLR 245 >gi|7514872|pir||S61455 flagellar hook protein flgE - Helicobacter mustelae (fragment) Length = 454 Score = 99.2 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 38/208 (18%), Positives = 66/208 (31%), Gaps = 15/208 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G++ A + L ++N++N +T GF+ + F +++ Sbjct: 1 MLRSLWSGVSGMQAHQVALDVESNNIANVNTTGFKYSRATFVDMISQTKLIATSPHKGGL 60 Query: 49 -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGR 105 + V GS +T + D A+EGD +F + + TRDG Sbjct: 61 GGQNDVSVGLGVNVNSTTKVFSQGSTQNTDVKTDLAIEGDGFFIISPDRGKTQNFTRDGE 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 F +G+LV+ G M + E + I + Sbjct: 121 FLFDANGNLVTNGGYVVQGWMKDDLRNAEKISEDDFFRVDTTKPIQNIQIDPAMMMPARA 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVT 193 S R N ++ G T Sbjct: 181 SSNISLRANLNAGRHVDQVANVFGLGST 208 >gi|260886641|ref|ZP_05897904.1| flagellar hook protein FlgE [Selenomonas sputigena ATCC 35185] gi|330839527|ref|YP_004414107.1| flagellar hook-basal body protein [Selenomonas sputigena ATCC 35185] gi|260863784|gb|EEX78284.1| flagellar hook protein FlgE [Selenomonas sputigena ATCC 35185] gi|329747291|gb|AEC00648.1| flagellar hook-basal body protein [Selenomonas sputigena ATCC 35185] Length = 496 Score = 99.2 bits (245), Expect = 5e-19, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 67/183 (36%), Gaps = 16/183 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ + + R+ + +N++N +T+GF++ +V F++ + ++ Sbjct: 1 MMRSLFSGVSGLKSHQTRMDVIGNNIANVNTIGFKSSRVTFADTLYQTQSGAAAPTGTVG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES---PRGIILTRDGR 105 Q V S +TG D AL G+ F + + TR G Sbjct: 61 GTNPKQIGLGVGVASVDQLFGDASPQATGKNTDLALSGNGLFVVSRDAGGKDKYYTRAGN 120 Query: 106 FKVTDDGSLVSA-SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 F + + V SG + V A I K + K + G T Y + Sbjct: 121 FSFDANYNYVVPGSGYHVVGWNADENGSIDTKGTPTGIQIKDAMRSMGAKATTTISYKGN 180 Query: 165 MSQ 167 M+ Sbjct: 181 MNS 183 Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 17/143 (11%), Positives = 42/143 (29%), Gaps = 4/143 (2%) Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 T + + D S + + + + + +A + + Sbjct: 351 TMTATVDLKSLTQYSGSDTIKADYDGHSAGTLKEINTDQSGILTGTYTNGEKRALAQVAV 410 Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGV----TVKRGFLEDSNANSMYEMGQMIHL 216 D + G + + + + + T+ LE SN + E M+ Sbjct: 411 AQFDNAPGLTKAGANLYTESNNSGTANIKTVSALGLTLTPSALEMSNVDVANEFADMVVT 470 Query: 217 TQKFNSITTLIDENEKSMLEAIR 239 + F S + +I ++ + I Sbjct: 471 QRGFQSNSKVITVGDEMLETVIN 493 >gi|119477952|ref|ZP_01618052.1| Flagellar basal body rod protein [marine gamma proteobacterium HTCC2143] gi|119448865|gb|EAW30107.1| Flagellar basal body rod protein [marine gamma proteobacterium HTCC2143] Length = 275 Score = 99.2 bits (245), Expect = 5e-19, Method: Composition-based stats. Identities = 47/247 (19%), Positives = 100/247 (40%), Gaps = 5/247 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + +++ + + A+N++N +T GF+ + + G D ++ Sbjct: 29 MDKAIYLAMSSGQNIMSAQAIHANNLANANTNGFQADFAQARAM-GVYYGDGHPTRAYAM 87 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G+ I TG +LD A+ GD W A+++P TR G KV +G L++A+ Sbjct: 88 TESPGTDFNRGALIETGRDLDMAVVGDGWIAVQAPDGSEAYTRMGSLKVDPNGQLLTATD 147 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA---TMGLYSVDMSQGFVRRENSG 176 + D + + K + G + V + + G Sbjct: 148 LPVLGDGGPISLPPADKITLGADGTITIRPTGQPPEVLSIVDRIKLVKPDYADLDKGVDG 207 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + + E + + ++ GF+E SN N + E+ ++ L ++F ++ E++ Sbjct: 208 LMRRLDGGQQEPDASIRLQSGFVESSNVNPVDELTAIMALARQFEINVKMMKVMEENSDA 267 Query: 237 AIRNIAS 243 A + + S Sbjct: 268 ARQVLRS 274 >gi|312135845|ref|YP_004003183.1| fagellar hook-basal body protein [Caldicellulosiruptor owensensis OL] gi|311775896|gb|ADQ05383.1| fagellar hook-basal body protein [Caldicellulosiruptor owensensis OL] Length = 489 Score = 99.2 bits (245), Expect = 5e-19, Method: Composition-based stats. Identities = 37/190 (19%), Positives = 70/190 (36%), Gaps = 15/190 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S ++A A + R+ + DN++N +TVGF++ +V F+ V ++ Sbjct: 1 MMRSMFSSISALRAHQTRMDVIGDNIANVNTVGFKSSRVTFASVFASVVKSASAPDTASG 60 Query: 49 --KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGR 105 ++ Q V+ ++ GS T D A+EGD +F + + TR G Sbjct: 61 RGGSNPMQIGLGVSVASADMNMTRGSLQRTDNPTDLAIEGDGFFVVGGDGKAPRYTRAGN 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 F + G+LV+A+G + M + + + ++ Sbjct: 121 FSLDRMGNLVTATGLNVLGWMYDPVNNQIDTTKSPSKINILAFPTLPPKATDKISFDGNL 180 Query: 166 SQGFVRRENS 175 S Sbjct: 181 SADLKTYSGQ 190 Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 36/93 (38%), Gaps = 5/93 (5%) Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANS 206 ++I + + + G R ++ + E + T+ +G LE SN + Sbjct: 394 NQLIGQIAVATFANPAGLQRIGDNLYINTVNSGDPEIGTPGSGSRGTISQGTLEMSNVDL 453 Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E MI + + + +I +++ + E + Sbjct: 454 AKEFTDMIVTQRGYQANARVITSSDEILQELVN 486 >gi|222095395|ref|YP_002529455.1| flagellar basal body rod protein flgg [Bacillus cereus Q1] gi|221239453|gb|ACM12163.1| flagellar basal-body rod protein [Bacillus cereus Q1] Length = 267 Score = 99.2 bits (245), Expect = 5e-19, Method: Composition-based stats. Identities = 50/265 (18%), Positives = 93/265 (35%), Gaps = 25/265 (9%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53 IG + QR++ ++N++N T GF+ + + +I Sbjct: 1 MNGLYIGSMGMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIG 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDF-----ALEGDAWFALESPRGIILTRDGRFKV 108 V +++ G+ T + DF A ++F LTRDG F + Sbjct: 61 SVDYAVVPAATHVNLVQGNIQMTNSATDFFLDDGANGTTSFFVTSKNDETFLTRDGSFTI 120 Query: 109 TDDGSLVSASGKYPVLDMA-------SVPIQIPQKDEIFNVGEKGEISQKGK---VIATM 158 D L ++SG Y + +V + EI+ G + + VIA + Sbjct: 121 NSDRYLQTSSGAYVMDVNNERIKIPENVNFFVSNNGEIYREVNDGTLQKPDIKRIVIAQL 180 Query: 159 GLYSVDMSQG--FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 +VD ++REN + VK LE+SN + EM ++ Sbjct: 181 QTKTVDAEANSRLMQRENKSFTLAEGNIADLPNGTGLVKNHMLENSNVDMTKEMADLMTD 240 Query: 217 TQKFNSITTLIDENEKSMLEAIRNI 241 + ++ ++ +K + I Sbjct: 241 QRMISASQRVMTSFDKIYEKEANEI 265 >gi|47095247|ref|ZP_00232858.1| flagellar basal-body rod protein, putative [Listeria monocytogenes str. 1/2a F6854] gi|254829339|ref|ZP_05234026.1| flagellar basal body rod protein FlgG [Listeria monocytogenes FSL N3-165] gi|254830327|ref|ZP_05234982.1| flagellar basal body rod protein FlgG [Listeria monocytogenes 10403S] gi|254900082|ref|ZP_05260006.1| flagellar basal body rod protein FlgG [Listeria monocytogenes J0161] gi|254911365|ref|ZP_05261377.1| conserved hypothetical protein [Listeria monocytogenes J2818] gi|254935692|ref|ZP_05267389.1| flagellar basal body rod protein FlgG [Listeria monocytogenes F6900] gi|255026599|ref|ZP_05298585.1| flagellar basal body rod protein FlgG [Listeria monocytogenes FSL J2-003] gi|284801012|ref|YP_003412877.1| flagellar basal body rod protein FlgG [Listeria monocytogenes 08-5578] gi|284994154|ref|YP_003415922.1| flagellar basal body rod protein FlgG [Listeria monocytogenes 08-5923] gi|47016318|gb|EAL07240.1| flagellar basal-body rod protein, putative [Listeria monocytogenes str. 1/2a F6854] gi|258601751|gb|EEW15076.1| flagellar basal body rod protein FlgG [Listeria monocytogenes FSL N3-165] gi|258608274|gb|EEW20882.1| flagellar basal body rod protein FlgG [Listeria monocytogenes F6900] gi|284056574|gb|ADB67515.1| flagellar basal body rod protein FlgG [Listeria monocytogenes 08-5578] gi|284059621|gb|ADB70560.1| flagellar basal body rod protein FlgG [Listeria monocytogenes 08-5923] gi|293589301|gb|EFF97635.1| conserved hypothetical protein [Listeria monocytogenes J2818] Length = 259 Score = 99.2 bits (245), Expect = 5e-19, Method: Composition-based stats. Identities = 41/251 (16%), Positives = 86/251 (34%), Gaps = 16/251 (6%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV--------VGAIKNDID 53 IG A + Q + ++N++N T GF+ ++ + G + + Sbjct: 1 MKGLYIGAAGMMNYMQHIQVHSNNVANAQTPGFKFDQLTSEVISRNKVNYQNGPVTRQVG 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFAL------EGDAWFALESPRGIILTRDGRFK 107 V +++ GS T + DF + +G +F I L+R G+F Sbjct: 61 TIDYGVRPAATHINLTAGSSYITNRDRDFFMQDTDPTQGSNFFITAKNGEISLSRGGQFH 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 G L +A G + + ++ + + +G V +Q Sbjct: 121 SDQFGFLRTADGANLLSATGEAIQVGQKTSIRAEANGDLYNAETSQYLGRLGTKFVSANQ 180 Query: 168 G--FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225 V+ + N T ++ G +E SN + EM Q++ + + Sbjct: 181 ADSLVKDGEGRLHINGVNTMNLPAGQGIIQNGVIETSNVDLGVEMVQLMDNQRMVQASKN 240 Query: 226 LIDENEKSMLE 236 +++ +K + Sbjct: 241 VVNMFDKVYDK 251 >gi|203284204|ref|YP_002221944.1| flagellar hook protein [Borrelia duttonii Ly] gi|201083647|gb|ACH93238.1| flagellar hook protein [Borrelia duttonii Ly] Length = 441 Score = 98.8 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 31/139 (22%), Positives = 52/139 (37%), Gaps = 12/139 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ + R+ V +N+SN +TVGF+ +V F +++ + Sbjct: 1 MMRSLYSGVSGLQNHQTRMDVVGNNISNVNTVGFKKGRVNFQDMISQSISGASRPTDGRG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 Q + GSF ST D + G+ +F L TR G F V Sbjct: 61 GVNPKQIGLGMTVAAVDTIHTQGSFQSTQKASDLGISGNGFFILRDGDNSFYTRAGAFDV 120 Query: 109 TDDGSLVSASGKYPVLDMA 127 + LV+ + + Sbjct: 121 DSNRHLVNPANGMRIQGWM 139 Score = 80.3 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 17/121 (14%), Positives = 39/121 (32%), Gaps = 5/121 (4%) Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183 + + + + V + + I + L S G + ++ + Sbjct: 318 QNGYGMGYMENYEIDQNGVITGVYSNGIRRTIGKIALASFVNPGGLAKAGDTNFTETSNS 377 Query: 184 TPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 T++ G LE SN + + MI + F + I +++ + E + Sbjct: 378 GQARIGETGFAGLGTIRSGVLEMSNVDLAEQFTDMIVTQRGFQANAKTITTSDQLLQELV 437 Query: 239 R 239 R Sbjct: 438 R 438 >gi|315636316|ref|ZP_07891566.1| flagellar distal rod protein FlgG [Arcobacter butzleri JV22] gi|315479405|gb|EFU70088.1| flagellar distal rod protein FlgG [Arcobacter butzleri JV22] Length = 239 Score = 98.8 bits (244), Expect = 6e-19, Method: Composition-based stats. Identities = 52/254 (20%), Positives = 93/254 (36%), Gaps = 31/254 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTI---KVKFSEVVGAIKNDIDQK-- 55 M A+ + RL +++N++N +T+GF+ + F+ + +++ Sbjct: 1 MNQGVYPLAASMINQINRLDQISNNLANVNTLGFKQEGTTETTFNYYLHKMESQQKLMLK 60 Query: 56 -----ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFKV 108 + Y + E+G + TG LDFAL F I+ TRDG FK Sbjct: 61 ESVVTNNIPKIDSRYTNAEMGPIVMTGNSLDFALNEPDTFFKIQNENGDIVYTRDGAFK- 119 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 DG LV ++G + +E + + E L + + Sbjct: 120 NLDGFLVDSNGNNV----------LNADNEAIVIEDGFESQIGVAKTPYTNLEKMGDNTY 169 Query: 169 FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228 V+ NI + + + RG +E SN NS+ M ++I ++F+ I Sbjct: 170 LVK--------NIDEAEQIENNDGKIVRGAVEQSNVNSVTAMVELIDAHRRFDQSQRAIK 221 Query: 229 ENEKSMLEAIRNIA 242 + I I Sbjct: 222 TIDDLNAGLIEKIG 235 >gi|302872562|ref|YP_003841198.1| fagellar hook-basal body protein [Caldicellulosiruptor obsidiansis OB47] gi|302575421|gb|ADL43212.1| fagellar hook-basal body protein [Caldicellulosiruptor obsidiansis OB47] Length = 489 Score = 98.8 bits (244), Expect = 6e-19, Method: Composition-based stats. Identities = 37/190 (19%), Positives = 70/190 (36%), Gaps = 15/190 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S ++A A + R+ + DN++N +TVGF++ +V F+ V ++ Sbjct: 1 MMRSMFSSISALRAHQTRMDVIGDNIANVNTVGFKSSRVTFASVFASVLKSASAPDTASG 60 Query: 49 --KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGR 105 ++ Q V+ ++ GS T D A+EGD +F + + TR G Sbjct: 61 RGGSNPMQIGLGVSVASVDMNMTRGSLQRTDNPTDLAIEGDGFFVVGGDGKAPRFTRAGN 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 F + G+LV+A+G + M + + + ++ Sbjct: 121 FSLDKMGNLVTATGLNVLGWMYDPVNNQIDTTKSPSKINILAFPTLPPKATDKISFDGNL 180 Query: 166 SQGFVRRENS 175 S Sbjct: 181 SADLKAYSGQ 190 Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 36/93 (38%), Gaps = 5/93 (5%) Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANS 206 ++I + + + G R ++ + E + T+ +G LE SN + Sbjct: 394 NQLIGQIAVATFANPAGLQRIGDNLYINTVNSGDPEIGTPGSGSRGTISQGTLEMSNVDL 453 Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E MI + + + +I +++ + + + Sbjct: 454 AKEFTDMIVTQRGYQANARVITASDELLQDLVN 486 >gi|260772276|ref|ZP_05881192.1| flagellar basal-body rod protein FlgG [Vibrio metschnikovii CIP 69.14] gi|260611415|gb|EEX36618.1| flagellar basal-body rod protein FlgG [Vibrio metschnikovii CIP 69.14] Length = 189 Score = 98.8 bits (244), Expect = 6e-19, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 68/182 (37%), Gaps = 8/182 (4%) Query: 68 KEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYPVLDM 126 G+ +T LD +EGD +F + P I +R+G+F + +G++V++ Y V Sbjct: 8 HTNGNVQTTNNSLDMMIEGDGFFQILMPDGNIGYSRNGQFTLNAEGAIVTSGAGYLVQPE 67 Query: 127 ASVPIQIPQKDEIFNVGEKGE--ISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT 184 VP + Q+ +V+ + + G + P Sbjct: 68 IVVPEDAISITVGNDGEVSVRLRGQQENQVLGQITIVDFINPGGLEPVGQNLYLPTGASG 127 Query: 185 PLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 ++ +++ LE SN N E+ MI + + + +I ++ M + Sbjct: 128 DPQEGVPGLDGLGNIRQSMLESSNVNVTEELVNMIEAQRVYEMNSKVISSVDQMMSFVNQ 187 Query: 240 NI 241 + Sbjct: 188 QL 189 >gi|78485811|ref|YP_391736.1| hypothetical protein Tcr_1470 [Thiomicrospira crunogena XCL-2] gi|78364097|gb|ABB42062.1| Flagellar basal-body rod protein FlgF [Thiomicrospira crunogena XCL-2] Length = 245 Score = 98.8 bits (244), Expect = 6e-19, Method: Composition-based stats. Identities = 38/241 (15%), Positives = 87/241 (36%), Gaps = 9/241 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + ++ + + A+N++N +T GF+ +F ++ ++ Sbjct: 1 MNRMLYVSMSGAKEVMLSQANNANNLANANTDGFKQDFNQFRA--QHVQGPGWNSRTYSL 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G+ TG +LD + + + A+++P LTR + +G L+ G Sbjct: 59 DERPATDFAPGAVKVTGRDLDIMTKENGFLAIQAPDGSEALTRSASMHLNPEGDLLDVHG 118 Query: 120 KYPVLDMASVPIQIP----QKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 + + + P Q + S + + V + + Sbjct: 119 NPVLNEGGAPINIPPAKSIQIGSDGTISFIPADSTNNLAVVLDQVRLVQPDIKQLEKGLD 178 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 G N + + + V G LE SN N++ + MI L++K+ ++ ++ Sbjct: 179 GYIRNNG--AELEQAPIRVVSGALESSNVNTVEALTNMIELSRKYEMQIKMMSTSKNHAQ 236 Query: 236 E 236 + Sbjct: 237 K 237 >gi|150390478|ref|YP_001320527.1| hypothetical protein Amet_2716 [Alkaliphilus metalliredigens QYMF] gi|149950340|gb|ABR48868.1| protein of unknown function DUF1078 domain protein [Alkaliphilus metalliredigens QYMF] Length = 441 Score = 98.8 bits (244), Expect = 6e-19, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 59/145 (40%), Gaps = 15/145 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S ++ A + R+ + +N++N +TVG++ +V F EV Sbjct: 1 MMRSMFSAVSGLQAHQLRMDAIGNNIANVNTVGYKGTRVTFQEVFSQTIRGAGAPQGGRG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF---ALESPRGIILTRDGR 105 Q V GS STG D + GD +F + + + TR G Sbjct: 61 GTNPQQVGLGVNVASMSTFHVRGSAESTGYNTDLMINGDGFFIVSSDANDQNHTYTRAGN 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVP 130 F++ + G+L++ G+ + +M V Sbjct: 121 FELDEAGNLITPGGQRVMGNMYDVE 145 Score = 82.2 bits (201), Expect = 5e-14, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 35/98 (35%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVR-RENSGISPNIPPTP----LEDLSGVTVKRGFLED 201 + + I + + + G + EN + P T+ G LE Sbjct: 341 FNNGYKRPIGQVAIANFRNPAGLEKIGENMYRNSPNSGEPLVGTPGSGGRGTLNPGTLEM 400 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E MI + F + + +I +++ + E + Sbjct: 401 SNVDLSREFTNMITTQRGFQANSRIITTSDEMLQEVVN 438 >gi|291286229|ref|YP_003503045.1| fagellar hook-basal body protein [Denitrovibrio acetiphilus DSM 12809] gi|290883389|gb|ADD67089.1| fagellar hook-basal body protein [Denitrovibrio acetiphilus DSM 12809] Length = 829 Score = 98.8 bits (244), Expect = 6e-19, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 60/145 (41%), Gaps = 14/145 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S ++ +Q + + +N+SN +TVG+++ + F +++ Sbjct: 1 MMRSLYSAISGLSVNQQAMDVLGNNISNVNTVGYKSGRAVFEDMLSQTLVGSTAPSDTLG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP--RGIILTRDGRF 106 + Q + E GS ST D A++GD +F ++ ++ TR G F Sbjct: 61 GTNSTQVGLGTSLAGVDTIFETGSMQSTSVNTDLAIQGDGFFVIKGAGSSDLLYTRAGDF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPI 131 + GSLV++SG Y M Sbjct: 121 RFDTSGSLVTSSGFYVQGWMVDPDT 145 Score = 76.1 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 15/91 (16%), Positives = 32/91 (35%), Gaps = 5/91 (5%) Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMY 208 IA + + G + ++ + T V LE+SN + Sbjct: 736 TIAQIATATFTNPGGLTKVGDTTFQKSSNSGDPAIGRPGTGFRGKVAAETLENSNVDLST 795 Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E MI + F + + +I +++ + E + Sbjct: 796 EFVNMITTQRGFQANSRVITTSDEMLQELMS 826 >gi|170722892|ref|YP_001750580.1| flagellar hook protein FlgE [Pseudomonas putida W619] gi|169760895|gb|ACA74211.1| flagellar basal body FlaE domain protein [Pseudomonas putida W619] Length = 451 Score = 98.8 bits (244), Expect = 6e-19, Method: Composition-based stats. Identities = 39/193 (20%), Positives = 74/193 (38%), Gaps = 3/193 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---DIDQKISFVA 60 SFNIGL+ A ++L +N++N +T GF++ + +F++V +Q + V Sbjct: 2 SFNIGLSGLYAANKQLDVTGNNIANVNTTGFKSSRAEFADVYAGANRLGVGKNQVGNGVR 61 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 G +TG LD ++G +F L + TR G F+ + +V++ G Sbjct: 62 LAAISQQFSQGDVNNTGNVLDMGIQGQGFFVLSDNGSRVYTRAGAFQADKNNFVVTSDGL 121 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 A +I + + + K + G+ + + G Sbjct: 122 RLQGYAADANGKIQKGVLSDLQIDTSALQPKATSLIDQGINLNSSATDIPLEIDDGTGAM 181 Query: 181 IPPTPLEDLSGVT 193 +P P + T Sbjct: 182 VPNLPFDPTDETT 194 Score = 68.0 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 34/98 (34%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLED 201 +Q+ + I + L S QG + + + + + +V+ LE Sbjct: 352 FSNQQSRAIGQVALASFANEQGLQQIGGTRWTETFSSGLPGIDEPKTGTLGSVESNALEA 411 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN N E+ ++I + + I M I+ Sbjct: 412 SNVNLTQELVELIKAQSNYQANAKTISTESTIMQTIIQ 449 >gi|300870390|ref|YP_003785261.1| flagellar hook protein FlgE [Brachyspira pilosicoli 95/1000] gi|300688089|gb|ADK30760.1| flagellar hook protein, FlgE [Brachyspira pilosicoli 95/1000] Length = 441 Score = 98.8 bits (244), Expect = 7e-19, Method: Composition-based stats. Identities = 33/152 (21%), Positives = 59/152 (38%), Gaps = 12/152 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-------- 52 M S G++ + R+ V +N+SN +T GF+ +V F +++ + Sbjct: 1 MMRSLFAGVSGLQNHQTRMDVVGNNISNVNTYGFKKGRVTFKDMISQSLSGAAKPQEDRG 60 Query: 53 ----DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 Q + G+ TG D A++G+ +F + TR+G F + Sbjct: 61 GINPQQVGLGMQVATIDTIHTQGALQVTGVNTDLAIQGEGFFIEKKGNSSYYTRNGAFSI 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIF 140 +G LV+ S Y V +V E+ Sbjct: 121 DKNGYLVNPSNGYKVQGWNAVLNPETGMMELN 152 Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 16/122 (13%), Positives = 37/122 (30%), Gaps = 5/122 (4%) Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 D ++ + + + K + + L + G + ++ + Sbjct: 316 IEQDGYTMGMLEGFSFDDSGQITGVFTNGNRKTLGQVALAKFANAGGLEKAGDTLFVESN 375 Query: 182 PPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 ++K G LE SN + + MI + F + I ++ + E Sbjct: 376 NSGAANIGVAAAEGRGSIKAGTLEMSNVDLSEQFTDMIVTQRGFQANARTITTADQLLQE 435 Query: 237 AI 238 I Sbjct: 436 VI 437 >gi|16802724|ref|NP_464209.1| flagellar basal body rod protein FlgG [Listeria monocytogenes EGD-e] gi|224502013|ref|ZP_03670320.1| flagellar basal body rod protein FlgG [Listeria monocytogenes FSL R2-561] gi|16410071|emb|CAC98760.1| lmo0682 [Listeria monocytogenes EGD-e] Length = 259 Score = 98.4 bits (243), Expect = 7e-19, Method: Composition-based stats. Identities = 41/251 (16%), Positives = 86/251 (34%), Gaps = 16/251 (6%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV--------VGAIKNDID 53 IG A + Q + ++N++N T GF+ ++ + G + + Sbjct: 1 MKGLYIGAAGMMNYMQHIQVHSNNVANAQTPGFKFDQLTSEVISRNKVNYQNGPVTRQVG 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFAL------EGDAWFALESPRGIILTRDGRFK 107 V +++ GS T + DF + +G +F I L+R G+F Sbjct: 61 TIDYGVRPAATHINLTAGSSYITNRDRDFFMQDTDPTQGSNFFITAKNGEISLSRGGQFH 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 G L +A G + + ++ + + +G V +Q Sbjct: 121 SDQFGFLRTADGANLLSATGEAIQVGQKTSIRAEANGDLYNAETSQYLGRLGTKFVSANQ 180 Query: 168 G--FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225 V+ + N T ++ G +E SN + EM Q++ + + Sbjct: 181 ADSLVKDGEGRLHINGVNTMNLPAGQGIIQNGVIETSNVDLGIEMVQLMDNQRMVQASKN 240 Query: 226 LIDENEKSMLE 236 +++ +K + Sbjct: 241 VVNMFDKVYDK 251 >gi|305432527|ref|ZP_07401689.1| flagellar hook protein [Campylobacter coli JV20] gi|304444566|gb|EFM37217.1| flagellar hook protein [Campylobacter coli JV20] Length = 545 Score = 98.4 bits (243), Expect = 8e-19, Method: Composition-based stats. Identities = 42/217 (19%), Positives = 80/217 (36%), Gaps = 9/217 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI----KNDIDQKI 56 M TSF G++ + A+N++N +T GF+ +F ++ + + Q Sbjct: 1 MMTSFYNGVSGVKTNSFGIDVYANNIANVNTTGFKYSDAQFKDIFYSTITTQSTNPAQGG 60 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLV 115 + + E GS +++ E D AL+G +F + G TR+G F+ G+LV Sbjct: 61 YGSGAASSQVVFEQGSPVASEGEFDVALQGKGFFGVLGADGEAYYTRNGAFRRDAAGNLV 120 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 + G + + M + D + + + + + G + Sbjct: 121 DSYGNFVLGTMNPAFAGVSYSDRVAGLMGDYLNTGTPVNSGFTVNSNDAFNIGTTASQGV 180 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQ 212 P P + V G L N N+ E+ + Sbjct: 181 IKVPVNMYLPPQVTQNVK-WSGSL---NTNATTEVVK 213 Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 44/124 (35%), Gaps = 7/124 (5%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 D + + K ++ + LY+ QG V ++ + Sbjct: 419 QQDGVAEGFFEQYNISDDGSIVAQFSNGKNAIVGKLALYNFINEQGLVAMGDNIFAATAN 478 Query: 183 P-------TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 + ++ K GFLE SN + E+ +I + F++ + I +++ + Sbjct: 479 SGDASFIMKDGQVINTAKFKGGFLEQSNVDLSAELSNLIVTQKAFDASSKSITTSDQMIQ 538 Query: 236 EAIR 239 +AI Sbjct: 539 KAIN 542 >gi|307699899|ref|ZP_07636950.1| putative flagellar hook protein FlgE [Mobiluncus mulieris FB024-16] gi|307614937|gb|EFN94155.1| putative flagellar hook protein FlgE [Mobiluncus mulieris FB024-16] Length = 512 Score = 98.4 bits (243), Expect = 8e-19, Method: Composition-based stats. Identities = 30/139 (21%), Positives = 56/139 (40%), Gaps = 14/139 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G++ + L ++N++N +T GF++ +F + + Sbjct: 1 MLRSLFTGISGLSVHQTMLDVTSNNIANVNTTGFKSASTRFEDTFSQLVKSGATARLNER 60 Query: 49 -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 + Q V + G+ +TG LD + GD +F L+ G + TR+G F Sbjct: 61 GGMNPAQVGLGVKLQSITNNFTGGAAQNTGRNLDTMINGDGFFVLKKTNGTQVYTRNGSF 120 Query: 107 KVTDDGSLVSASGKYPVLD 125 + G +V+A G + Sbjct: 121 GLDAKGQVVAADGSFVQGW 139 Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 12/94 (12%), Positives = 32/94 (34%), Gaps = 5/94 (5%) Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNAN 205 + + + + G + S + + + + G +E SN + Sbjct: 416 MSRAMGKIATAAFSNPLGLEKAGASYFVESGNSGQPQIGEPGSGSRGAMTGGAIEMSNVD 475 Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E +I + F + T +I +++ + E + Sbjct: 476 LAAEFTNLILSQRGFQANTRVITTSDEILQELVS 509 >gi|289433960|ref|YP_003463832.1| flagellar basal-body rod protein, putative [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|315301915|ref|ZP_07872926.1| flagellar basal body rod protein FlgG [Listeria ivanovii FSL F6-596] gi|289170204|emb|CBH26744.1| flagellar basal-body rod protein, putative [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|313629711|gb|EFR97833.1| flagellar basal body rod protein FlgG [Listeria ivanovii FSL F6-596] gi|313634394|gb|EFS00983.1| flagellar basal body rod protein FlgG [Listeria seeligeri FSL N1-067] Length = 259 Score = 98.4 bits (243), Expect = 8e-19, Method: Composition-based stats. Identities = 43/252 (17%), Positives = 85/252 (33%), Gaps = 18/252 (7%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG---------AIKNDI 52 IG A + Q + ++N++N T GF+ ++ SEV+ + + Sbjct: 1 MKGLYIGAAGMMNYMQHIQVHSNNVANAQTPGFKFDQLT-SEVISKNKVNYQNNPVAKQV 59 Query: 53 DQKISFVASGKEYLSKEVGSFISTGTELDFAL------EGDAWFALESPRGIILTRDGRF 106 V +++ GS T + DF + +G +F I L+R G+F Sbjct: 60 GTIDYGVRPAATHINLTAGSSYITNRDRDFFMQDANPEQGSNFFITAKNGEISLSRGGQF 119 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 G L +A G + + ++ + +G V Sbjct: 120 HSDQFGFLRTADGANLLSATGEAVQVGVKTSIRAEANGALYNAETNAYLGRLGTRFVSAD 179 Query: 167 Q--GFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224 Q + + N T ++ G LE SN + EM Q++ + + Sbjct: 180 QVDNLAKDGEGRLHVNGTNTMNLPAGQGIIQNGVLETSNVDLGVEMVQLMDNQRMVQASK 239 Query: 225 TLIDENEKSMLE 236 +++ +K + Sbjct: 240 NIVNMFDKVYDK 251 >gi|57169039|ref|ZP_00368167.1| flagellar hook protein flgE Cj0043 [Campylobacter coli RM2228] gi|57019584|gb|EAL56274.1| flagellar hook protein flgE Cj0043 [Campylobacter coli RM2228] Length = 545 Score = 98.4 bits (243), Expect = 8e-19, Method: Composition-based stats. Identities = 42/217 (19%), Positives = 80/217 (36%), Gaps = 9/217 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI----KNDIDQKI 56 M TSF G++ + A+N++N +T GF+ +F ++ + + Q Sbjct: 1 MMTSFYNGVSGVKTNSFGIDVYANNIANVNTTGFKYSDAQFKDIFYSTITTQSTNPAQGG 60 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLV 115 + + E GS +++ E D AL+G +F + G TR+G F+ G+LV Sbjct: 61 YGSGAASSQVVFEQGSPVASEGEFDVALQGKGFFGVLGADGEAYYTRNGAFRRDAAGNLV 120 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 + G + + M + D + + + + + G + Sbjct: 121 DSYGNFVLGTMNPAFAGVSYSDRVAGLMGDYLNTGTPVNSGFTVNSNDAFNIGTTASQGV 180 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQ 212 P P + V G L N N+ E+ + Sbjct: 181 IKVPVNMYLPPQVTQNVK-WSGSL---NTNATTEVVK 213 Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 44/124 (35%), Gaps = 7/124 (5%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 D + + K ++ + LY+ QG V ++ + Sbjct: 419 QQDGVAEGFFEQYNISDDGSIVAQFSNGKNAIVGKLALYNFINEQGLVAMGDNIFAATAN 478 Query: 183 P-------TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 + ++ K GFLE SN + E+ +I + F++ + I +++ + Sbjct: 479 SGDASFIMKDGQVINTAKFKGGFLEQSNVDLSAELSNLIVTQKAFDASSKSITTSDQMIQ 538 Query: 236 EAIR 239 +AI Sbjct: 539 KAIN 542 >gi|168334552|ref|ZP_02692708.1| hypothetical protein Epulo_06138 [Epulopiscium sp. 'N.t. morphotype B'] Length = 473 Score = 98.4 bits (243), Expect = 8e-19, Method: Composition-based stats. Identities = 32/179 (17%), Positives = 64/179 (35%), Gaps = 14/179 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ + + ++ + +N++N +T+GF++ +V F++V Sbjct: 1 MMRSLFSGVSGLQSHQLKMDVIGNNIANVNTIGFKSQRVTFADVYYQTTQSATTANEMTG 60 Query: 54 -------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106 Q + + GS T D +E DA F + G TR G F Sbjct: 61 LGGMNAMQIGLGTSVSSIDMLMTPGSAQRTDNPFDLMIEDDAMFIVSDATGTYYTRSGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 +V + G+LV +G A+ + + ++ + T + Sbjct: 121 RVDERGTLVIPNGMRVQGWPANEIGTEIMRGTVGDLKLNTPENNSADPQTTTDVNITGN 179 Score = 79.9 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 43/141 (30%), Gaps = 5/141 (3%) Query: 100 LTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG 159 LT+ D + +I G+I G+V T Sbjct: 334 LTQYDSITNLDPNMGTLDFNGAGKAAGEMQGFDVGTDGKITAYYSNGDIKLLGQVAVTY- 392 Query: 160 LYSVDMSQGFVRRENS-GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 D G + ++ S + + G LE SN + E +MI + Sbjct: 393 ---FDNLAGLEKVADNVFKSTANSGDFDGVGAAGSFATGTLEMSNVDLSKEFTEMITTQR 449 Query: 219 KFNSITTLIDENEKSMLEAIR 239 + + + I +++ + E I Sbjct: 450 GYQASSKTITTSDEMLQELIN 470 >gi|328948413|ref|YP_004365750.1| flagellar hook-basal body protein [Treponema succinifaciens DSM 2489] gi|328448737|gb|AEB14453.1| flagellar hook-basal body protein [Treponema succinifaciens DSM 2489] Length = 463 Score = 98.4 bits (243), Expect = 9e-19, Method: Composition-based stats. Identities = 27/139 (19%), Positives = 56/139 (40%), Gaps = 12/139 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S G++ + R+ + +N+SN +T GF+ + F +++ N + Sbjct: 1 MMRSLYAGVSGLQNHQTRMDVIGNNISNVNTYGFKKGRATFQDMISQQINGAARPTEEVG 60 Query: 56 -------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 ++ G+ +TG D A++G+ +F L++ +R G F Sbjct: 61 GVNPKEVGLGMSVATIDTIFTQGNLQTTGNTTDLAIQGNGFFVLKNGDETFYSRAGVFGT 120 Query: 109 TDDGSLVSASGKYPVLDMA 127 +G+LV+ + V Sbjct: 121 DSNGTLVNPANGLRVQGWM 139 Score = 73.4 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 15/91 (16%), Positives = 32/91 (35%), Gaps = 5/91 (5%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSM 207 + I + + S G ++ ++ + +I T + G LE SN + Sbjct: 369 RTIGQVAMASFTNQGGLEKKGDNTYAESINSGMANIGESGTQGKGSMLSGTLEMSNVDLT 428 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 ++ MI + F S I + + + Sbjct: 429 EQLTDMIVTQRGFESNAKTIQTGDSMLETVL 459 >gi|34558065|ref|NP_907880.1| flagellar hook protein FlgE [Wolinella succinogenes DSM 1740] gi|34483783|emb|CAE10780.1| FLAGELLAR HOOK PROTEIN [Wolinella succinogenes] Length = 716 Score = 98.0 bits (242), Expect = 9e-19, Method: Composition-based stats. Identities = 29/141 (20%), Positives = 53/141 (37%), Gaps = 14/141 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50 M S G++ A + L +N++N +T GF+ + FS+++ + Sbjct: 1 MLRSLWSGVSGMQAHQVALDVEGNNIANVNTTGFKYSRANFSDMLSQVNRIATSPYGGLG 60 Query: 51 --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL--ESPRGIILTRDGRF 106 + + GS T ++D A+ GD +F + R TRDG F Sbjct: 61 GQNDYSIGLGTSINSTTKIFGQGSIQDTTNKMDLAIGGDGFFIVSGNGGRTNAYTRDGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMA 127 G++V+ +G Sbjct: 121 GFDAAGNMVNNAGYIVQGWTR 141 Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats. Identities = 11/90 (12%), Positives = 32/90 (35%), Gaps = 5/90 (5%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYE 209 +A + + S + G ++ S + LE SN + Sbjct: 624 LAQVAIASFTNNGGLQAEGSNLFSQTANSGEPVVGTAGSGGRGKISPSALEMSNVDLSRS 683 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + Q+I + + F + + + +++ + ++ Sbjct: 684 LTQLIVVQRGFQANSKTVTTSDQILNTLLQ 713 >gi|241766920|ref|ZP_04764726.1| flagellar basal body FlaE domain protein [Acidovorax delafieldii 2AN] gi|241362624|gb|EER58472.1| flagellar basal body FlaE domain protein [Acidovorax delafieldii 2AN] Length = 425 Score = 98.0 bits (242), Expect = 9e-19, Method: Composition-based stats. Identities = 39/186 (20%), Positives = 69/186 (37%), Gaps = 3/186 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN--DIDQKISFVAS 61 SF GL+ A + L + N++N +T GF+ + +F+E+V + + V + Sbjct: 2 SFQQGLSGLNASSKNLDVIGHNIANANTTGFKASRAEFAEMVASAIGSAGGNNAGIGVET 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGK 120 G+ TG LD A+ G+ +F L+ P TR G FK+ G++V+ Sbjct: 62 ANVAQQFTQGNLTITGNSLDVAINGNGFFTLQQPDGSPAYTRAGNFKLDKTGNMVTNDNA 121 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 + + + K + ++ N +P Sbjct: 122 KVMGYPVDPLTGLRSGTAPVPMVFPTAEPIPAKQTTKIMAGFNLDARAPDAAGNPAATPP 181 Query: 181 IPPTPL 186 IP TP Sbjct: 182 IPATPR 187 Score = 79.1 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 23/145 (15%), Positives = 45/145 (31%), Gaps = 10/145 (6%) Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQK-----GKVIATMG 159 F V + V+ G + + + NV G I + + + Sbjct: 279 TFPVDINLDKVTQFGTKFAVSDLTQDGYTAGELTGINVENNGMIMTRYSNGVTRAEGQLA 338 Query: 160 LYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMI 214 L S +QG + D + ++ G LEDSN + E+ M+ Sbjct: 339 LASFRNTQGLAAVGGNNWVETFESGQPVLGTATDGNFGALRSGALEDSNVDLTAELVNMM 398 Query: 215 HLTQKFNSITTLIDENEKSMLEAIR 239 + + + I ++ M + Sbjct: 399 TAQRAYQANAQTIKTQDQVMSTLVN 423 >gi|95929857|ref|ZP_01312598.1| protein of unknown function DUF1078-like [Desulfuromonas acetoxidans DSM 684] gi|95134153|gb|EAT15811.1| protein of unknown function DUF1078-like [Desulfuromonas acetoxidans DSM 684] Length = 548 Score = 98.0 bits (242), Expect = 9e-19, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 77/197 (39%), Gaps = 6/197 (3%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI---KNDIDQKISF 58 Q+S G++ A L+ + +N++N++T+GF++ + FS+++ A Q Sbjct: 4 QSSLFSGVSGLNANGNALTVLGNNIANSNTIGFKSSRTIFSDLLSAEIAGSGGASQVGRG 63 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG--IILTRDGRFKVTDDGSLVS 116 G+F +T + D A+EG +F + P I TR G F + G+LV+ Sbjct: 64 AGLSTVDNIFSQGTFETTESNTDLAIEGPGFFMVSDPGEASIYYTRAGAFNFDETGTLVN 123 Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 G + + + + S +++ + ++ + Sbjct: 124 PEGYAVQGYYLNDAGETVGDLTDLTIETR-SFSPANPTTKISLATNLNANDPYLGTQGDA 182 Query: 177 ISPNIPPTPLEDLSGVT 193 +SP P + + + Sbjct: 183 VSPFDVNDPADTSNYAS 199 Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 17/143 (11%), Positives = 39/143 (27%), Gaps = 4/143 (2%) Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 T+ + D + + + + + + +A + L Sbjct: 403 TQAVDIIFDATQYSSESDVISQTQDGYATGTLVSLTVDNDGNILGNYSNGEPRKLARIAL 462 Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDL----SGVTVKRGFLEDSNANSMYEMGQMIHL 216 G + N+ + LE SN + E +MI Sbjct: 463 AKFSNPVGLAKAGNNLYEATDDSGTAIVGTVGSGVGKIFTNSLEMSNVDLAQEFVKMITT 522 Query: 217 TQKFNSITTLIDENEKSMLEAIR 239 + F + + +I ++ + E I Sbjct: 523 QRGFQANSKIITTTDELLGELIN 545 >gi|225849153|ref|YP_002729317.1| flagellar hook protein FlgE [Sulfurihydrogenibium azorense Az-Fu1] gi|225643172|gb|ACN98222.1| flagellar hook protein FlgE [Sulfurihydrogenibium azorense Az-Fu1] Length = 409 Score = 98.0 bits (242), Expect = 9e-19, Method: Composition-based stats. Identities = 38/202 (18%), Positives = 75/202 (37%), Gaps = 15/202 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS--- 57 M SF ++ ++ + ++DN++N +T+GF++ +V F ++V Sbjct: 1 MLQSFYTAVSGLNGNQKWIDVISDNIANVNTIGFKSERVTFEDLVAKSLTTFANNTPKNM 60 Query: 58 ----FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDG 112 GSF +T LD AL+G+ +F ++ +G TR G+F++ +G Sbjct: 61 EIGGGSFIALTTKDFSQGSFQNTVNPLDLALDGEGFFMVKDNQGTVYYTRAGQFRLDANG 120 Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172 +V+ G I + N+ S K+ ++ R Sbjct: 121 DIVNVDGMKLQGWKLDTAGNISAALDKINIPYSILPSITTKI-------NLVEPTNLDSR 173 Query: 173 ENSGISPNIPPTPLEDLSGVTV 194 N+ P P ++ Sbjct: 174 VNTISGTIDPTNPATFNYANSM 195 Score = 81.8 bits (200), Expect = 8e-14, Method: Composition-based stats. Identities = 25/122 (20%), Positives = 47/122 (38%), Gaps = 3/122 (2%) Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 Y D + I V + K ++IA + + + + VR+ N+ PN Sbjct: 285 YANQDGFAKGDLIGVSVSEDGVVRGMYSNGKVELIARLAVATFKDKEMLVRKGNNLYLPN 344 Query: 181 IPPTPLEDLSGV---TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 G V+ GFLE SN + E +I + + + +I +++ + EA Sbjct: 345 TQSFTPIITPGGILSKVRSGFLELSNVDISKEFINLITAQRAYQANARVITTDDQILQEA 404 Query: 238 IR 239 + Sbjct: 405 MN 406 >gi|315654586|ref|ZP_07907492.1| flagellar hook protein FlgE [Mobiluncus curtisii ATCC 51333] gi|315491050|gb|EFU80669.1| flagellar hook protein FlgE [Mobiluncus curtisii ATCC 51333] Length = 487 Score = 98.0 bits (242), Expect = 9e-19, Method: Composition-based stats. Identities = 35/169 (20%), Positives = 63/169 (37%), Gaps = 14/169 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50 M S G++ + L ++N++N +T GF++ +F + + Sbjct: 1 MLRSLFTGISGLSVHQTMLDVTSNNIANVNTTGFKSASTRFEDTFSQLVRSGAAPRLNER 60 Query: 51 ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRF 106 + Q V + G+ TG LD + GD ++ L G + TR+G F Sbjct: 61 GGMNPAQVGLGVKLQSITQNFTGGAAQMTGRNLDTMINGDGFYVLRKTNGTSVYTRNGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI 155 V G LV+A G + M + I ++ + +GK Sbjct: 121 GVDAQGQLVAADGSFVQGWMGNEDGTINASGTPGHITLPLTKTVEGKPT 169 Score = 81.1 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 18/135 (13%), Positives = 44/135 (32%), Gaps = 10/135 (7%) Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-----EISQKGKVIATMGLYSVDMSQGF 169 ++ G V + ++V G + + +A + + S G Sbjct: 350 MTGFGGVNNFGQKQVDGNMAGYMTGYSVEADGTIRGTFSNGDNRALARIAVASFANPLGL 409 Query: 170 VRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224 + +S + T + G +E SN + E +I + F + + Sbjct: 410 EKAGSSYFVETGNSGQPQIGEAGTGQRGAMTGGAIEMSNVDLAAEFTNLILSQRGFQANS 469 Query: 225 TLIDENEKSMLEAIR 239 +I +++ + E + Sbjct: 470 RVITTSDEILQELVN 484 >gi|229017058|ref|ZP_04173977.1| Flagellar basal-body rod protein flgG [Bacillus cereus AH1273] gi|229023239|ref|ZP_04179749.1| Flagellar basal-body rod protein flgG [Bacillus cereus AH1272] gi|228738033|gb|EEL88519.1| Flagellar basal-body rod protein flgG [Bacillus cereus AH1272] gi|228744231|gb|EEL94314.1| Flagellar basal-body rod protein flgG [Bacillus cereus AH1273] Length = 267 Score = 98.0 bits (242), Expect = 9e-19, Method: Composition-based stats. Identities = 42/265 (15%), Positives = 84/265 (31%), Gaps = 25/265 (9%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53 IG + QR++ ++N++N T GF+ + + +I Sbjct: 1 MNGLYIGSMGMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGSTTNIG 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDA-----WFALESPRGIILTRDGRFKV 108 V +++ G+ T + DF L+ +F LTRDG F + Sbjct: 61 SVDYAVVPAATHVNLVQGNIQMTNSATDFFLDDGTAGTTSFFVTSKNDETFLTRDGSFTI 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV----- 163 D L ++SG Y + D + + + + + Sbjct: 121 NSDRYLQTSSGAYVMDVNNERIRIPENVDFFVSNNGEIYREVNDGTLQKPDIKRIVIAQL 180 Query: 164 -------DMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + + ++REN + VK LE+SN + EM ++ Sbjct: 181 QTKTVDAEANARLMQRENKSFTLAEGNIADLPNGTGAVKNHMLENSNVDMTKEMADLMTS 240 Query: 217 TQKFNSITTLIDENEKSMLEAIRNI 241 + + ++ +K + I Sbjct: 241 QKMIQASQRVMTSFDKIYEKEANEI 265 >gi|206889889|ref|YP_002248123.1| flagellar hook protein FlgE [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741827|gb|ACI20884.1| flagellar hook protein FlgE [Thermodesulfovibrio yellowstonii DSM 11347] Length = 434 Score = 98.0 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 38/161 (23%), Positives = 63/161 (39%), Gaps = 3/161 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID--QKISF 58 M TS G++ A LS + DN++N +TVGF+ + F++++ Q Sbjct: 1 MLTSLFTGISGLNANGLALSVIGDNIANANTVGFKASRANFADILSQTLGGASAMQVGRG 60 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSA 117 G+ +T LD A+EGD +F ++ P TR G+F+V DG +V Sbjct: 61 TMIIDIQKLFTQGTLETTSNPLDLAIEGDGFFVVQQPNGPTYYTRAGQFRVNKDGYIVDP 120 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158 +G V + + +I T Sbjct: 121 NGYLLQAYQMDVNGNVTGAIGNVYLAGLMSDPSATDLITTQ 161 Score = 71.8 bits (174), Expect = 7e-11, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 30/87 (34%), Gaps = 4/87 (4%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQ 212 K +A L V + + G + P + V LE SN + E + Sbjct: 349 KFVAAHNLTKVGNNLYLESYASGGPTYGAPG----TVGVGKVYANSLEASNVDLAEEFIR 404 Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIR 239 MI + + + +I + + E + Sbjct: 405 MIAAQRAYQANVRVITTTDNMLNELMN 431 >gi|332669198|ref|YP_004452206.1| flagellar hook-basal body protein [Cellulomonas fimi ATCC 484] gi|332338236|gb|AEE44819.1| flagellar hook-basal body protein [Cellulomonas fimi ATCC 484] Length = 392 Score = 98.0 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 28/145 (19%), Positives = 52/145 (35%), Gaps = 12/145 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA------------I 48 M S G++ + + L +N++N +T GF++ + +F + + Sbjct: 1 MLRSLFSGISGLRSHQTMLDVTGNNIANVNTTGFKSSQTQFQDTLSQMLQNGGGAQDGVG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 + Q V + G+ TG D ++GD +F + TR G F Sbjct: 61 GTNPAQVGLGVRVAGITTNFTQGASQMTGRSTDMMIQGDGFFVVRKGAESYYTRAGSFDF 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQI 133 G +V V A+V + Sbjct: 121 DSTGQMVLPGEGALVQGWAAVNGVV 145 Score = 82.2 bits (201), Expect = 6e-14, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 34/92 (36%), Gaps = 5/92 (5%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLEDSNANSM 207 + I + + S G + S ++ P T+ G LE SN + Sbjct: 298 QTIGRLAIGSFTNPSGLEKAGGSLFRTSVNSGDPQVGPAGTGGRGTLAGGALEMSNVDLS 357 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E +I + F + + +I +++ + E + Sbjct: 358 SEFTSLIIAQRGFQANSRVITTSDEVLQELVN 389 >gi|320529447|ref|ZP_08030535.1| putative flagellar hook protein FlgE [Selenomonas artemidis F0399] gi|320138413|gb|EFW30307.1| putative flagellar hook protein FlgE [Selenomonas artemidis F0399] Length = 681 Score = 98.0 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 31/148 (20%), Positives = 57/148 (38%), Gaps = 13/148 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ + R+ + +N++N +T GF+ +V F++++ + Sbjct: 1 MMRSMFSGVSGLKGHQTRMDVIGNNIANVNTTGFKASRVTFADMISQNLSGASAPQGTIG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFAL-EGDAWFALESPRGIILTRDGRFK 107 Q ++ L GS STG D A+ GD F + TR+G F+ Sbjct: 61 GVNPKQIGLGMSVASTDLLYTNGSVQSTGKNTDIAISRGDGLFVVSRGEQKYYTRNGAFE 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQ 135 G+L S V + ++ Sbjct: 121 FDAAGNLTIPSTGLYVQGYMATDGRVTP 148 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 12/88 (13%), Positives = 28/88 (31%), Gaps = 4/88 (4%) Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKR----GFLEDSNANSMYEMG 211 A + + + G + + + + LE SN + + Sbjct: 591 AQIAMAQFNNPSGLTKMGGNLYQESNNSGTRTISGAADIGSELTTSALEMSNVDIADQFS 650 Query: 212 QMIHLTQKFNSITTLIDENEKSMLEAIR 239 MI + F S + +I +++ + I Sbjct: 651 DMIITQRGFQSNSKIITVSDEMLETLIN 678 >gi|222824502|ref|YP_002576076.1| flagellar hook protein FlgE [Campylobacter lari RM2100] gi|222539723|gb|ACM64824.1| flagellar hook protein FlgE [Campylobacter lari RM2100] Length = 541 Score = 98.0 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 46/192 (23%), Positives = 78/192 (40%), Gaps = 8/192 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----DIDQKI 56 M T+F G+ + + A N+SN +TVGF+ V F +V + + Q Sbjct: 1 MFTAFYNGVNGVKSQSYGIDNTAHNISNVNTVGFKYSDVAFKDVFYSTVTTQSYNKGQTG 60 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVS 116 +G E G ++T E D A+ G +F + + GI TR+G F+ +G+LV Sbjct: 61 YGSVAGATNDVFEQGPLVATDHEFDVAIAGKGFFGVSNGNGIYYTRNGAFRPDANGNLVD 120 Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD----MSQGFVRR 172 A+G Y + M +I D + N+ + + I + +QG + Sbjct: 121 ANGNYVLGTMNPSLQEIQLSDRVSNIFGQQLGQKVTTAITGKPNENFQIGGVNTQGPISV 180 Query: 173 ENSGISPNIPPT 184 + P P Sbjct: 181 PKNLYLPPQPTQ 192 Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 18/126 (14%), Positives = 39/126 (30%), Gaps = 7/126 (5%) Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 + D + + +A + L++ QG + + Sbjct: 413 HTQTDGKGEGFLNNYAINTDGTIIATFTNGEQIPMAKLALFNFTNEQGLEKLGENLYGQT 472 Query: 181 IPP-------TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 + S T K +LE SN + +I L + ++S + I ++ Sbjct: 473 GNSGNPTFLLDANGNFSTATFKGSYLEQSNVDLSVAFTNLITLQKAYDSSSKSITTADQM 532 Query: 234 MLEAIR 239 + +AI Sbjct: 533 IQKAIN 538 >gi|291280096|ref|YP_003496931.1| flagellar hook protein FlgE [Deferribacter desulfuricans SSM1] gi|290754798|dbj|BAI81175.1| flagellar hook protein FlgE [Deferribacter desulfuricans SSM1] Length = 817 Score = 98.0 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 65/179 (36%), Gaps = 14/179 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-------- 52 M S G+ ++ + + +N++N +TVG++T ++ F +++ + Sbjct: 1 MLRSLYAGITGLNEHQKSMDVIGNNIANVNTVGYKTSRIVFQDLLFQTISGGKAPAGNLG 60 Query: 53 ----DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF--ALESPRGIILTRDGRF 106 Q + ++ G+ +TG D A++G+ +F E+ TR G F Sbjct: 61 GINPKQIGTGTSTASVDTIFTQGTLQNTGVTTDMAIQGNGFFVVRSENENENYYTRAGNF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 DG LV+ G MA + + + AT + V Sbjct: 121 TFDKDGYLVTPDGFIVQGWMADADTGEILTNTEVSDIQLSSAYTSVPAKATTEVSLVGN 179 Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 14/90 (15%), Positives = 35/90 (38%), Gaps = 5/90 (5%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSNANSMYE 209 IA +G+ +G ++ ++ + ++ LE+SN + E Sbjct: 725 IAQVGIAIFTNQEGLLKVGDTLFAETPNSGQAAVGQATTGGRGSIAASALENSNVDLARE 784 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 MI + F + + +I +++ + E + Sbjct: 785 FVNMITTQRGFQANSRVITTSDELLQELMN 814 >gi|296133040|ref|YP_003640287.1| fagellar hook-basal body protein [Thermincola sp. JR] gi|296031618|gb|ADG82386.1| fagellar hook-basal body protein [Thermincola potens JR] Length = 419 Score = 98.0 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 36/195 (18%), Positives = 64/195 (32%), Gaps = 17/195 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ + R+ + +N++N +T+G++ + F +++ Sbjct: 1 MMRSMFAGVSGLRNHQVRMDVIGNNIANVNTIGYKKARATFQDILSQNIRGASSPTATRG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 Q + GS +TG D ++GD +F + TR G F Sbjct: 61 GTNPMQVGLGMTINTIDTIHTQGSSETTGKVTDMMVDGDGFFIVGDGTNRFYTRAGNFDF 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 G+L++ SG MA I I G KG+ I + Sbjct: 121 DAVGNLINTSGLLVQGWMADSQGNIDTTVAI-----SGIKIPKGQSIQPKATENATFVNN 175 Query: 169 FVRRENSGISPNIPP 183 + PP Sbjct: 176 LDAGTPQYDNTVTPP 190 Score = 78.8 bits (192), Expect = 6e-13, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 38/93 (40%), Gaps = 5/93 (5%) Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANS 206 K +A + L + + G ++ + + + + + T + G LE SN + Sbjct: 324 TKQLAQVALANFNNPAGLMKVGGNLFTQSNNSGNAQIGAAGTGGRGEISPGKLEMSNVDL 383 Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E MI + F + + +I +++ + E + Sbjct: 384 SQEFTDMIITQRGFQANSRIITVSDEMLQELVN 416 >gi|126653432|ref|ZP_01725528.1| flagellar basal-body rod protein [Bacillus sp. B14905] gi|126589788|gb|EAZ83921.1| flagellar basal-body rod protein [Bacillus sp. B14905] Length = 210 Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 46/211 (21%), Positives = 82/211 (38%), Gaps = 20/211 (9%) Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFAL------------EGDAWFALESPR 96 N + + + + G ST D AL G +F L P Sbjct: 1 MNQVGALNTGTYLQETLPNYIQGQIYSTDFTTDMALIDGNLPQNEDGVSGSIFFRLAHPD 60 Query: 97 G-IILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI 155 G TR+G F + G LV+ G Y + D +I ++ F + E G I + + Sbjct: 61 GGEAYTRNGNFTLDGQGYLVNGQGLYVLNDAGQ---RIQLPNDDFRLDESGAIYVNNQQV 117 Query: 156 ATMGLYSVDMSQGFVRRENSGISP----NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMG 211 A +G+ +++N I N+P + T+++ FLE SN +S M Sbjct: 118 ARVGVSYAANPNMLQKQDNGLIRTENGVNLPSAYGANGVSFTLRQNFLEGSNVDSGRAMT 177 Query: 212 QMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 ++ + F + ++ ++SM +A+ I Sbjct: 178 DLMTAYRAFEANQKVLQAYDRSMEKAVNEIG 208 >gi|229189870|ref|ZP_04316880.1| Flagellar basal-body rod protein flgG [Bacillus cereus ATCC 10876] gi|228593544|gb|EEK51353.1| Flagellar basal-body rod protein flgG [Bacillus cereus ATCC 10876] Length = 267 Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 42/265 (15%), Positives = 84/265 (31%), Gaps = 25/265 (9%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53 IG + QR++ ++N++N T GF+ + + +I Sbjct: 1 MNGLYIGSMGMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIG 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDF-----ALEGDAWFALESPRGIILTRDGRFKV 108 V +++ G+ T + DF A ++F LTRDG F + Sbjct: 61 SVDYAVVPAATHVNLVQGNIQMTNSATDFFLDDGAAGTTSFFVTSKNDETFLTRDGSFTL 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV----- 163 D L ++SG Y + + + + + + + Sbjct: 121 NSDRYLQTSSGAYVMDVNNERIRIPENVEFFVSNNGEIYREVNDGTLQKPDIKRIVIAQL 180 Query: 164 -------DMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + + V+REN + VK LE+SN + EM ++ Sbjct: 181 QTKTVDAETNARLVQRENKSFTLAEGNIANLPNGTGIVKNHMLENSNVDMTKEMADLMTD 240 Query: 217 TQKFNSITTLIDENEKSMLEAIRNI 241 + + ++ +K + I Sbjct: 241 QKMIQASQRVMTSFDKIYEKEANEI 265 >gi|223038348|ref|ZP_03608642.1| flagellar hook protein FlgE [Campylobacter rectus RM3267] gi|222880205|gb|EEF15292.1| flagellar hook protein FlgE [Campylobacter rectus RM3267] Length = 784 Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 35/189 (18%), Positives = 62/189 (32%), Gaps = 18/189 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50 M S G+ A + + +N++N +TVGF+ + F +++ Sbjct: 1 MMRSLWAGVTGLQAHQIAMDVEGNNIANVNTVGFKYSRANFDDLIYQTSRIATGPQNRHG 60 Query: 51 --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106 + Q V + + GS +T + D AL+GD +F + + TR+G F Sbjct: 61 GVNSMQVGLGVQTNSTTRIFKQGSLQTTDKQTDIALQGDGFFMVSPDGGKTTYYTRNGDF 120 Query: 107 KVTDDGSLVSASGKYPVLDMA----SVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162 G+ V G M +I ++ IA G Sbjct: 121 SRDSVGNFVDNGGNIVQGWMRDEVTGEIDPTRPIGDIKIPSGLTVPARATTNIALKGNLD 180 Query: 163 VDMSQGFVR 171 G + Sbjct: 181 SGNDVGNKK 189 Score = 73.0 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 21/203 (10%), Positives = 57/203 (28%), Gaps = 6/203 (2%) Query: 43 EVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTR 102 +V + + S T ++ A + I L Sbjct: 580 TMVIQVAEPNRINPDGEPANVITGYVRFNPDGSLATYSPASITFGAQNGSAGGQHIELKL 639 Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ-KGKVIATMGLY 161 ++ S + S + ++ + G + + +A +G+ Sbjct: 640 GTTAQMDGLASTDNDSSTADISQDGYASGELNGIRIDQSGTLVGSFTNGRSLGLAQVGVA 699 Query: 162 SVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 ++G + S + + LE SN + + Q+I + Sbjct: 700 KFSNNEGLSSEGGNLFSRTANSGDPVIGAAQTAGRGKISSSSLEMSNVDLSRSLTQLIVV 759 Query: 217 TQKFNSITTLIDENEKSMLEAIR 239 + F + + I +++ + ++ Sbjct: 760 QRGFQANSKTITTSDEMLNTLLQ 782 >gi|1184296|gb|AAA87351.1| flagellar hook protein [Borrelia burgdorferi] Length = 442 Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 54/139 (38%), Gaps = 12/139 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ + + V +N++N +T+GF+ +V F +++ + Sbjct: 1 MMRSLYSGVSGLQNHQTIMDVVGNNIANVNTIGFKKGRVNFQDMISQSISGASRPTDARG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 Q + G+F ST D + G+ +F L+ + + TR G F V Sbjct: 61 GTNPKQVGLGMNVASIDTIHTQGAFQSTQKASDLGVSGNGFFILKEGKNLFYTRAGAFYV 120 Query: 109 TDDGSLVSASGKYPVLDMA 127 D LV+ + + Sbjct: 121 DSDRHLVNPANGMRIQGWM 139 Score = 78.4 bits (191), Expect = 9e-13, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 46/141 (32%), Gaps = 5/141 (3%) Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 G + + S+S K + D + + + V + + + + L S Sbjct: 299 GSYTDSITQFADSSSTKAIIQDGYGMGYMENYEIDQNGVIVGIYSNGIRRDLGKIALASF 358 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQ 218 G + ++ + ++ G LE +N + + MI + Sbjct: 359 MNPGGLAKSGDTNFVETSNSGQVRIGETGLAGLGDIRSGVLEMANVDLAEQFTDMIVTQR 418 Query: 219 KFNSITTLIDENEKSMLEAIR 239 F + I +++ + E +R Sbjct: 419 GFQANAKTITTSDQLLQELVR 439 >gi|157738173|ref|YP_001490857.1| flagellar distal rod protein FlgG [Arcobacter butzleri RM4018] gi|157700027|gb|ABV68187.1| flagellar distal rod protein FlgG [Arcobacter butzleri RM4018] Length = 239 Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 51/254 (20%), Positives = 93/254 (36%), Gaps = 31/254 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTI---KVKFSEVVGAIKNDIDQK-- 55 M A+ + RL +++N++N +T+GF+ + F+ + +++ Sbjct: 1 MNQGVYPLAASMINQINRLDQISNNLANVNTLGFKQEGTTETTFNYYLDKMESQQKLMLK 60 Query: 56 -----ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFKV 108 + Y + E+G + TG LDFAL F I+ TRDG FK Sbjct: 61 ESVVTNNIPKIDSRYTNAEMGPIVMTGNSLDFALNEPDTFFKIQNENGDIVYTRDGAFK- 119 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 DG LV ++G + +E V + E L + + Sbjct: 120 NLDGFLVDSNGNNV----------LNADNEAIVVEDGFESQIGVAKTPYTNLEKMGDNTY 169 Query: 169 FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228 V+ N+ + + + RG +E SN NS+ M ++I ++F+ I Sbjct: 170 LVK--------NVDEAEQIENNDGRIVRGAVEQSNVNSVTAMVELIDAHRRFDQSQRAIK 221 Query: 229 ENEKSMLEAIRNIA 242 + I + Sbjct: 222 TIDDLNAGLIEKVG 235 >gi|207092742|ref|ZP_03240529.1| flagellar hook protein FlgE [Helicobacter pylori HPKX_438_AG0C1] Length = 646 Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 66/197 (33%), Gaps = 15/197 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G+ A + L ++N++N +T GF+ + F +++ + Sbjct: 1 MLRSLWSGVNGMQAHQIALDIESNNIANVNTTGFKYSRASFVDMLSQVKLIATAPYKNGL 60 Query: 49 -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGR 105 + V G+ +T + D A++GD +F + RGI TRDG Sbjct: 61 AGQNDFSVGLGVGVDATTKIFSQGNIQNTDVKTDLAIQGDGFFIISPDRGITRNFTRDGE 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 F GSLV+ G + + + + + + I + Sbjct: 121 FLFDSQGSLVTTGGLVVQGWVRNGSDTGNKGSDTDALKVDNTGPLENIRIDPGMVMPARA 180 Query: 166 SQGFVRRENSGISPNIP 182 S R N + Sbjct: 181 SNRISMRANLNAGRHAD 197 >gi|11386808|sp|P57423|FLGF_BUCAI RecName: Full=Flagellar basal-body rod protein flgF gi|25403600|pir||F84969 flagellar basal-body rod protein flgF [imported] - Buchnera sp. (strain APS) gi|10039012|dbj|BAB13046.1| flagellar basal-body rod protein flgF [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] Length = 244 Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 42/242 (17%), Positives = 86/242 (35%), Gaps = 16/242 (6%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A L ++ S +++N++N T GF+ K F+ N + S KEY + Sbjct: 3 AANQLLEKQSIISNNLANISTTGFK-EKFIFA---IQNHNVKNLYNSDKKITKEYYNLSP 58 Query: 71 GSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASV 129 G TG LD ++ D W ++ T++G K+ L + + + Sbjct: 59 GILRYTGRNLDLFIKDDGWLTVKDTNGQEAYTKNGHLKINSKRKLTIQDNEVIGNNCNII 118 Query: 130 PIQIPQKDEIFNVGEKGEISQKGKVIAT----------MGLYSVDMSQGFVRRENSGISP 179 + + N ++ ++ T + G + + Sbjct: 119 IPKNIILKILSNGVITSVKNKHKHIVETKIGSLKLVQLPSQDLIQNENGLFYLKKNNEIN 178 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 ++ + V+ G LE+SN N+ M +MI ++F +I +++ A Sbjct: 179 KKHTNTIKHSKKIRVQSGMLEESNVNASKNMIEMISNARQFEMQMKMISMCDQNAEYA-N 237 Query: 240 NI 241 + Sbjct: 238 QL 239 >gi|15645489|ref|NP_207664.1| flagellar hook protein FlgE [Helicobacter pylori 26695] gi|2506418|sp|P50610|FLGE_HELPY RecName: Full=Flagellar hook protein flgE gi|2313997|gb|AAD07911.1| flagellar hook (flgE) [Helicobacter pylori 26695] Length = 718 Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 66/197 (33%), Gaps = 15/197 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G+ A + L ++N++N +T GF+ + F +++ + Sbjct: 1 MLRSLWSGVNGMQAHQIALDIESNNIANVNTTGFKYSRASFVDMLSQVKLIATAPYKNGL 60 Query: 49 -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGR 105 + V G+ +T + D A++GD +F + RGI TRDG Sbjct: 61 AGQNDFSVGLGVGVDATTKIFSQGNIQNTDVKTDLAIQGDGFFIISPDRGITRNFTRDGE 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 F GSLV+ G + + + + + + I + Sbjct: 121 FLFDSQGSLVTTGGLVVQGWVRNGSDTGNKGSDTDALKVDNTGPLENIRIDPGMVMPARA 180 Query: 166 SQGFVRRENSGISPNIP 182 S R N + Sbjct: 181 SNRISMRANLNAGRHAD 197 Score = 71.1 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 14/128 (10%), Positives = 40/128 (31%), Gaps = 5/128 (3%) Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + + + + + V + + +A + L + G + Sbjct: 588 SETYAIEQNGYQAGDLMDVRFDSDGVLLGAFSNGRTLALAQVALANFANDAGLQALGGNV 647 Query: 177 ISPNIPPTPLEDLSGVTVKRGF-----LEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 S + T +RG LE SN + + +I + + F + + + ++ Sbjct: 648 FSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQRGFQANSKAVTTSD 707 Query: 232 KSMLEAIR 239 + + + Sbjct: 708 QILNTLLN 715 >gi|217034494|ref|ZP_03439905.1| hypothetical protein HP9810_873g10 [Helicobacter pylori 98-10] gi|216943035|gb|EEC22514.1| hypothetical protein HP9810_873g10 [Helicobacter pylori 98-10] Length = 718 Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 66/197 (33%), Gaps = 15/197 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G+ A + L ++N++N +T GF+ + F +++ + Sbjct: 1 MIRSLWSGVNGMQAHQIALDIESNNIANVNTTGFKYSRASFVDMLSQVKLIATAPYKNGL 60 Query: 49 -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGR 105 + V G+ +T + D A++GD +F + RGI TRDG Sbjct: 61 AGQNDFSVGLGVGVDATTKIFSQGNIQNTDVKTDLAIQGDGFFIISPDRGITRNFTRDGE 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 F GSLV+ G + + + + + + I + Sbjct: 121 FLFDSQGSLVTTGGLVVQGWVRNGSDTGNKGSDTDALKVDNTGPLENIRIDPGMVMPARA 180 Query: 166 SQGFVRRENSGISPNIP 182 S R N + Sbjct: 181 SNRISMRANLNAGRHAD 197 Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 14/128 (10%), Positives = 40/128 (31%), Gaps = 5/128 (3%) Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + + + + + V + + +A + L + G + Sbjct: 588 SETYAIEQNGYQAGDLMDVRFDSDGVLLGAFSNGRTLALAQVALANFANDAGLQALGGNV 647 Query: 177 ISPNIPPTPLEDLSGVTVKRGF-----LEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 S + T +RG LE SN + + +I + + F + + + ++ Sbjct: 648 FSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQRGFQANSKAVTTSD 707 Query: 232 KSMLEAIR 239 + + + Sbjct: 708 QILNTLLN 715 >gi|160896079|ref|YP_001561661.1| flagellar basal body FlaE domain-containing protein [Delftia acidovorans SPH-1] gi|160361663|gb|ABX33276.1| flagellar basal body FlaE domain protein [Delftia acidovorans SPH-1] Length = 423 Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 38/193 (19%), Positives = 66/193 (34%), Gaps = 7/193 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN--DIDQKISFVAS 61 F GL+ A + L + N++N +T GF++ + +F+E V + V Sbjct: 2 GFQQGLSGLNAASKNLDVIGHNIANANTTGFKSSRAEFAEAVASAVGSASGQNSGIGVNV 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGK 120 G +TG LD A+ G+ +F + P TR G F + G+L + G Sbjct: 62 AAVTQQFRQGPITTTGNNLDVAINGNGFFVVRQPDGSTAYTRAGNFGLDKQGNLKTVQGD 121 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 + + + G+ IA +D+S R + Sbjct: 122 NVMGYPVDATT----GKVLAGGQPVPMVFPSGQPIAAKTTTKIDVSLNLDARATPAAGNS 177 Query: 181 IPPTPLEDLSGVT 193 P+ T Sbjct: 178 TATPPVPATPRAT 190 Score = 79.1 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 14/89 (15%), Positives = 32/89 (35%), Gaps = 5/89 (5%) Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEM 210 + L + +QG ++ P E + +++ G LEDSN + E+ Sbjct: 333 GQLALAAFTNTQGLGAVGDNKWVETSDSGPALNGTAESGTFGSLRSGALEDSNVDLTAEL 392 Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIR 239 M+ + + + I ++ + Sbjct: 393 VNMMTAQRAYQANAQTIKTQDQVFSTLVN 421 >gi|188997539|ref|YP_001931790.1| protein of unknown function DUF1078 domain protein [Sulfurihydrogenibium sp. YO3AOP1] gi|188932606|gb|ACD67236.1| protein of unknown function DUF1078 domain protein [Sulfurihydrogenibium sp. YO3AOP1] Length = 413 Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 35/162 (21%), Positives = 67/162 (41%), Gaps = 8/162 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV-------VGAIKNDID 53 M SF + +Q L+ ++DN++N +T+GF++ +V F ++ Sbjct: 1 MLQSFYTAITGLNGNQQWLNVISDNIANVNTIGFKSERVTFEDLVAHSLTTFANNTPKNT 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDG 112 + GSF++T + D AL+G+ +F ++ +G TR G+F++ +G Sbjct: 61 EIGGGSFVALTTKDFSQGSFMNTNSPTDLALDGEGFFMVKDNQGTVYYTRAGQFRLDANG 120 Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV 154 LV+ G I + NV + K+ Sbjct: 121 DLVNVDGMKLQGWTLDNNGNIAGALDKINVPYAINPTITTKI 162 Score = 78.4 bits (191), Expect = 7e-13, Method: Composition-based stats. Identities = 23/122 (18%), Positives = 46/122 (37%), Gaps = 3/122 (2%) Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 Y D + + + + + K IA + + + + VR+ N+ PN Sbjct: 289 YANQDGFAKGDLLGVAVTEDGIVKGMYSNGNVKNIARLAVATFKDKEMLVRKGNNLYLPN 348 Query: 181 IPPTPLEDLSGV---TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 G V+ GFLE SN + E +I + + + +I +++ + EA Sbjct: 349 TQTFTPIITPGGILSKVRSGFLELSNVDISREFINLITAQRAYQANARVITTDDQILQEA 408 Query: 238 IR 239 + Sbjct: 409 MN 410 >gi|146281772|ref|YP_001171925.1| flagellar basal-body rod protein FlgF [Pseudomonas stutzeri A1501] gi|145569977|gb|ABP79083.1| flagellar basal-body rod protein FlgF [Pseudomonas stutzeri A1501] Length = 203 Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 46/199 (23%), Positives = 80/199 (40%), Gaps = 4/199 (2%) Query: 47 AIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGR 105 + D + S + G+ TG +LD A+EG+ W A+++P R G Sbjct: 2 QVFGDSYPARVYAMSERPGTDFTAGALQETGRDLDVAIEGEGWVAVQAPDGNEAYVRTGS 61 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEIS---QKGKVIATMGLYS 162 + G L +A G + + + I +K +I + G + V+ L Sbjct: 62 LNIDALGMLRTADGMPVLGNGGPIAIPPEEKLDIGHDGTISIRALGEDPNVVVTVDRLKL 121 Query: 163 VDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222 V+ + + G+ PLE + V V GFLE SN N++ EM M+ L+++F Sbjct: 122 VNPDPQQLEKGTDGLIRMKDGQPLEADANVRVTSGFLEASNVNAVAEMTSMLALSRQFEL 181 Query: 223 ITTLIDENEKSMLEAIRNI 241 ++ E R + Sbjct: 182 HVKMMRTAEDDAAAMARVL 200 >gi|229102371|ref|ZP_04233079.1| Flagellar basal-body rod protein flgG [Bacillus cereus Rock3-28] gi|228681018|gb|EEL35187.1| Flagellar basal-body rod protein flgG [Bacillus cereus Rock3-28] Length = 267 Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 42/265 (15%), Positives = 84/265 (31%), Gaps = 25/265 (9%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53 IG + QR++ ++N++N T GF+ + + +I Sbjct: 1 MNGLYIGSMGMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAMTNIG 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDF-----ALEGDAWFALESPRGIILTRDGRFKV 108 V +++ G+ T + DF A ++F LTRDG F + Sbjct: 61 SVDYAVVPAATHVNLVQGNVQITNSATDFFLDDGAAGTSSFFVTSKNDETFLTRDGSFTL 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV----- 163 D L ++SG Y + + + + + + + Sbjct: 121 NSDRYLQTSSGAYVMDVNNERIRIPENVNFFVSNNGEIYREINEGTLQKPDIKRIVIAQL 180 Query: 164 -------DMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + + V+REN + VK LE+SN + EM ++ Sbjct: 181 QTKTVDAETNARLVQRENKSFTLAEGNIANLPNGTGIVKDHMLENSNVDMTKEMADLMSS 240 Query: 217 TQKFNSITTLIDENEKSMLEAIRNI 241 + + ++ +K + I Sbjct: 241 QKMIQASQRIMTSFDKIYEKEANEI 265 >gi|332296627|ref|YP_004438550.1| flagellar hook-basal body protein [Thermodesulfobium narugense DSM 14796] gi|332179730|gb|AEE15419.1| flagellar hook-basal body protein [Thermodesulfobium narugense DSM 14796] Length = 559 Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 31/204 (15%), Positives = 73/204 (35%), Gaps = 12/204 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + ++ + + + +N++N +T+GF+ V FS+++ + + + Sbjct: 1 MLRAMSSAVSGLQNNQTAMDVIGNNIANVNTIGFKASTVTFSQMLSQTLSGASAPQNGLG 60 Query: 61 SGKEYL------------SKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 S +TG D A++G+ +F + + TRDG F V Sbjct: 61 GINPMQIGLGTQIAAISTPFTSSSTENTGVNTDLAIQGNGFFIVNNGSQNFYTRDGSFNV 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 +G+LV+++G A + + ++ S K + + + Sbjct: 121 DANGNLVNSAGLKVQGWQADSSGVVNPSGPVSDLKIPIGQSMPAKQSNNITMTGNLDASQ 180 Query: 169 FVRRENSGISPNIPPTPLEDLSGV 192 + +S + + S Sbjct: 181 YANTSSSTTPYAVTSSGAIYDSLG 204 Score = 68.7 bits (166), Expect = 6e-10, Method: Composition-based stats. Identities = 19/144 (13%), Positives = 48/144 (33%), Gaps = 10/144 (6%) Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQK-----GKVIATMGL 160 + T + S ++ G L+ AS + +++ + G I+ I + L Sbjct: 411 WTPTINFSGMTQYGGSSSLNFASQDGYSSGSLQSYSIDQSGVITGTYSNGLTNAIGQIAL 470 Query: 161 YSVDMSQGFVRRENSGISP-----NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIH 215 + G ++ S T+ LE SN + + +I Sbjct: 471 ANFPNPSGLTSNGSNIYSTSSNSGTAQIGAAGSGGIGTIIPSALEMSNVDLSQQFTNLIT 530 Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239 + + + +I +++ + + + Sbjct: 531 TERGYEANARVITTSDQMLQDLLS 554 >gi|326791535|ref|YP_004309356.1| flagellar hook-basal body protein [Clostridium lentocellum DSM 5427] gi|326542299|gb|ADZ84158.1| flagellar hook-basal body protein [Clostridium lentocellum DSM 5427] Length = 432 Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 26/142 (18%), Positives = 53/142 (37%), Gaps = 14/142 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S ++ + R+ + +N++N +T+G+++ +V F++V Sbjct: 1 MMRSMFSAVSGLRVHQTRMDVIGNNIANVNTIGYKSQRVTFNDVFSQTLSSASAASDETG 60 Query: 49 --KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106 + Q V + G+ T D + G+ + + G TR G Sbjct: 61 RGGRNPMQVGLGVNVSSIDMLMTQGAAQRTDNPFDLMINGEGFIVVGDTNGTYFTRAGAL 120 Query: 107 KVTDDGSLVSASGKYPVLDMAS 128 + DG+L+ A+G A Sbjct: 121 RADVDGNLIIANGMKVKGWTAQ 142 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 17/124 (13%), Positives = 43/124 (34%), Gaps = 1/124 (0%) Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 ++ ++ + I + V + +++A + + D +G + ++ Sbjct: 306 STIDPKTINGNAAGKMIGYEIGGDGVITASYDNGDMRILAQVVVAKFDNPEGLEKVGDNL 365 Query: 177 I-SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 + T G LE SN + E MI + F + + +I +++ + Sbjct: 366 YKVTPNSGEFDGIGTVGTFNTGVLEMSNVDLSSEFTDMIVTQRGFQANSRIISVSDEMLQ 425 Query: 236 EAIR 239 E Sbjct: 426 ELTN 429 >gi|317180632|dbj|BAJ58418.1| flagellar hook protein FlgE [Helicobacter pylori F32] Length = 718 Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 66/197 (33%), Gaps = 15/197 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G+ A + L ++N++N +T GF+ + F +++ + Sbjct: 1 MLRSLWSGVNGMQAHQIALDIESNNIANVNTTGFKYSRASFVDMLSQVKLIATAPYKNGL 60 Query: 49 -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGR 105 + V G+ +T + D A++GD +F + RGI TRDG Sbjct: 61 AGQNDFSVGLGVGVDATTKIFSQGNIQNTDVKTDLAIQGDGFFIISPDRGITRNFTRDGE 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 F GSLV+ G + + + + + + I + Sbjct: 121 FLFDSQGSLVTTGGLVVQGWVRNGSDTGNKGSDTDALKVDNTGPLENIRIDPGMVMPARA 180 Query: 166 SQGFVRRENSGISPNIP 182 S R N + Sbjct: 181 SNRISMRANLNAGRHAD 197 Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 14/128 (10%), Positives = 40/128 (31%), Gaps = 5/128 (3%) Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + + + + + V + + +A + L + G + Sbjct: 588 SETYAIEQNGYQAGDLMDVRFDSDGVLLGAFSNGRTLALAQVALANFANDAGLQALGGNV 647 Query: 177 ISPNIPPTPLEDLSGVTVKRGF-----LEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 S + T +RG LE SN + + +I + + F + + + ++ Sbjct: 648 FSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQRGFQANSKAVTTSD 707 Query: 232 KSMLEAIR 239 + + + Sbjct: 708 QILNTLLN 715 >gi|108563278|ref|YP_627594.1| flagellar hook protein FlgE [Helicobacter pylori HPAG1] gi|217033066|ref|ZP_03438533.1| hypothetical protein HPB128_148g6 [Helicobacter pylori B128] gi|254779163|ref|YP_003057268.1| flagellar hook protein FlgE [Helicobacter pylori B38] gi|298736574|ref|YP_003729100.1| flagellar hook protein FlgE [Helicobacter pylori B8] gi|107837051|gb|ABF84920.1| flagellar hook protein [Helicobacter pylori HPAG1] gi|216945210|gb|EEC23895.1| hypothetical protein HPB128_148g6 [Helicobacter pylori B128] gi|254001074|emb|CAX29021.1| Flagellar hook protein FlgE [Helicobacter pylori B38] gi|298355764|emb|CBI66636.1| flagellar hook protein FlgE [Helicobacter pylori B8] gi|317009123|gb|ADU79703.1| flagellar hook protein FlgE [Helicobacter pylori India7] gi|317012675|gb|ADU83283.1| flagellar hook protein FlgE [Helicobacter pylori Lithuania75] Length = 718 Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 66/197 (33%), Gaps = 15/197 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G+ A + L ++N++N +T GF+ + F +++ + Sbjct: 1 MLRSLWSGVNGMQAHQIALDIESNNIANVNTTGFKYSRASFVDMLSQVKLIATAPYKNGL 60 Query: 49 -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGR 105 + V G+ +T + D A++GD +F + RGI TRDG Sbjct: 61 AGQNDFSVGLGVGVDATTKIFSQGNIQNTDVKTDLAIQGDGFFIISPDRGITRNFTRDGE 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 F GSLV+ G + + + + + + I + Sbjct: 121 FLFDSQGSLVTTGGLVVQGWVRNGSDTGNKGSDTDALKVDNTGPLENIRIDPGMVMPARA 180 Query: 166 SQGFVRRENSGISPNIP 182 S R N + Sbjct: 181 SNRISMRANLNAGRHAD 197 Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 14/128 (10%), Positives = 40/128 (31%), Gaps = 5/128 (3%) Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + + + + + V + + +A + L + G + Sbjct: 588 SETYAIEQNGYQAGDLMDVRFDSDGVLLGAFSNGRTLALAQVALANFANDAGLQALGGNV 647 Query: 177 ISPNIPPTPLEDLSGVTVKRGF-----LEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 S + T +RG LE SN + + +I + + F + + + ++ Sbjct: 648 FSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQRGFQANSKAVTTSD 707 Query: 232 KSMLEAIR 239 + + + Sbjct: 708 QILNTLLN 715 >gi|317014278|gb|ADU81714.1| flagellar hook protein FlgE [Helicobacter pylori Gambia94/24] Length = 718 Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 66/197 (33%), Gaps = 15/197 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G+ A + L ++N++N +T GF+ + F +++ + Sbjct: 1 MLRSLWSGVNGMQAHQIALDIESNNIANVNTTGFKYSRASFVDMLSQVKLIATAPYKNGL 60 Query: 49 -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGR 105 + V G+ +T + D A++GD +F + RGI TRDG Sbjct: 61 AGQNDFSVGLGVGVDATTKIFSQGNIQNTDVKTDLAIQGDGFFIISPDRGITRNFTRDGE 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 F GSLV+ G + + + + + + I + Sbjct: 121 FLFDSQGSLVTTGGLVVQGWVRNGSDTGNKGSDTDALKVDNTGPLENIRIDPGMVMPARA 180 Query: 166 SQGFVRRENSGISPNIP 182 S R N + Sbjct: 181 SNRISMRANLNAGRHAD 197 Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 14/128 (10%), Positives = 40/128 (31%), Gaps = 5/128 (3%) Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + + + + + V + + +A + L + G + Sbjct: 588 SETYAIEQNGYQAGDLMDVRFDSDGVLLGAFSNGRTLALAQVALANFANDAGLQALGGNV 647 Query: 177 ISPNIPPTPLEDLSGVTVKRGF-----LEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 S + T +RG LE SN + + +I + + F + + + ++ Sbjct: 648 FSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQRGFQANSKAVTTSD 707 Query: 232 KSMLEAIR 239 + + + Sbjct: 708 QILNTLLN 715 >gi|312126828|ref|YP_003991702.1| fagellar hook-basal body protein [Caldicellulosiruptor hydrothermalis 108] gi|311776847|gb|ADQ06333.1| fagellar hook-basal body protein [Caldicellulosiruptor hydrothermalis 108] Length = 486 Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 37/155 (23%), Positives = 65/155 (41%), Gaps = 15/155 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S ++A A + R+ + DN++N +TVGF++ +V F+ V ++ Sbjct: 1 MMRSMFSSISALRAHQTRMDVIGDNIANVNTVGFKSSRVTFASVFASVLKSASAPDTASG 60 Query: 49 --KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGR 105 ++ Q V+ ++ GS T D A+EGD +F + R TR G Sbjct: 61 RGGSNPMQIGLGVSVASVDMNMTRGSLQRTDNPTDLAIEGDGFFVVGGDGRAPRFTRAGN 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF 140 F + G+LV+A+G + M + Sbjct: 121 FSLDKMGNLVTATGLNVLGWMYDPVNNQIDTTKSP 155 Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 36/93 (38%), Gaps = 5/93 (5%) Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANS 206 ++I + + + G R ++ + E + T+ +G LE SN + Sbjct: 391 NQLIGQIAIATFANPAGLQRIGDNLYINTVNSGDPEIGTPGSGSRGTISQGTLEMSNVDL 450 Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E MI + + + +I +++ + + + Sbjct: 451 AKEFTDMIVTQRGYQANARVITASDELLQDLVN 483 >gi|261839317|gb|ACX99082.1| flagellar hook protein FlgE [Helicobacter pylori 52] gi|317178772|dbj|BAJ56560.1| flagellar hook protein FlgE [Helicobacter pylori F30] Length = 718 Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 66/197 (33%), Gaps = 15/197 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G+ A + L ++N++N +T GF+ + F +++ + Sbjct: 1 MLRSLWSGVNGMQAHQIALDIESNNIANVNTTGFKYSRASFVDMLSQVKLIATAPYKNGL 60 Query: 49 -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGR 105 + V G+ +T + D A++GD +F + RGI TRDG Sbjct: 61 AGQNDFSVGLGVGVDATTKIFSQGNIQNTDVKTDLAIQGDGFFIISPDRGITRNFTRDGE 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 F GSLV+ G + + + + + + I + Sbjct: 121 FLFDSQGSLVTTGGLVVQGWVRNGSDTGNKGSDTDALKVDNTGPLENIRIDPGMVMPARA 180 Query: 166 SQGFVRRENSGISPNIP 182 S R N + Sbjct: 181 SNRISMRANLNAGRHAD 197 Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 14/128 (10%), Positives = 40/128 (31%), Gaps = 5/128 (3%) Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + + + + + V + + +A + L + G + Sbjct: 588 SETYAIEQNGYQAGDLMDVRFDSDGVLLGAFSNGRTLALAQVALANFANDAGLQALGGNV 647 Query: 177 ISPNIPPTPLEDLSGVTVKRGF-----LEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 S + T +RG LE SN + + +I + + F + + + ++ Sbjct: 648 FSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQRGFQANSKAVTTSD 707 Query: 232 KSMLEAIR 239 + + + Sbjct: 708 QILNTLLN 715 >gi|210135063|ref|YP_002301502.1| flagellar hook protein FlgE [Helicobacter pylori P12] gi|210133031|gb|ACJ08022.1| flagellar hook protein [Helicobacter pylori P12] Length = 718 Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 66/197 (33%), Gaps = 15/197 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G+ A + L ++N++N +T GF+ + F +++ + Sbjct: 1 MLRSLWSGVNGMQAHQIALDIESNNIANVNTTGFKYSRASFVDMLSQVKLIATAPYKNGL 60 Query: 49 -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGR 105 + V G+ +T + D A++GD +F + RGI TRDG Sbjct: 61 AGQNDFSVGLGVGVDATTKIFSQGNIQNTDVKTDLAIQGDGFFIISPDRGITRNFTRDGE 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 F GSLV+ G + + + + + + I + Sbjct: 121 FLFDSQGSLVTTGGLVVQGWVRNGSDTGNKGSDTDALKVDNTGPLENIRIDPGMVMPARA 180 Query: 166 SQGFVRRENSGISPNIP 182 S R N + Sbjct: 181 SNRISMRANLNAGRHAD 197 Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 14/128 (10%), Positives = 40/128 (31%), Gaps = 5/128 (3%) Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + + + + + V + + +A + L + G + Sbjct: 588 SETYAIEQNGYQAGDLMDVRFDSDGVLLGAFSNGRTLALAQVALANFANDAGLQALGGNV 647 Query: 177 ISPNIPPTPLEDLSGVTVKRGF-----LEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 S + T +RG LE SN + + +I + + F + + + ++ Sbjct: 648 FSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQRGFQANSKAVTTSD 707 Query: 232 KSMLEAIR 239 + + + Sbjct: 708 QILNTLLN 715 >gi|15611871|ref|NP_223522.1| flagellar hook protein FlgE [Helicobacter pylori J99] gi|11386868|sp|Q9ZKY0|FLGE_HELPJ RecName: Full=Flagellar hook protein flgE gi|4155354|gb|AAD06366.1| FLAGELLAR HOOK PROTEIN [Helicobacter pylori J99] gi|307637557|gb|ADN80007.1| Flagellar hook protein [Helicobacter pylori 908] gi|325996148|gb|ADZ51553.1| Flagellar hook protein [Helicobacter pylori 2018] gi|325997744|gb|ADZ49952.1| Flagellar hook protein [Helicobacter pylori 2017] Length = 718 Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 66/197 (33%), Gaps = 15/197 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G+ A + L ++N++N +T GF+ + F +++ + Sbjct: 1 MLRSLWSGVNGMQAHQIALDIESNNIANVNTTGFKYSRASFVDMLSQVKLIATAPYKNGL 60 Query: 49 -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGR 105 + V G+ +T + D A++GD +F + RGI TRDG Sbjct: 61 AGQNDFSVGLGVGVDATTKIFSQGNIQNTDVKTDLAIQGDGFFIISPDRGITRNFTRDGE 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 F GSLV+ G + + + + + + I + Sbjct: 121 FLFDSQGSLVTTGGLVVQGWVRNGSDTGNKGSDTDALKVDNTGPLENIRIDPGMVMPARA 180 Query: 166 SQGFVRRENSGISPNIP 182 S R N + Sbjct: 181 SNRISMRANLNAGRHAD 197 Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 14/128 (10%), Positives = 40/128 (31%), Gaps = 5/128 (3%) Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + + + + + V + + +A + L + G + Sbjct: 588 SETYAIEQNGYQAGDLMDVRFDSDGVLLGAFSNGRTLALAQVALANFANDAGLQALGGNV 647 Query: 177 ISPNIPPTPLEDLSGVTVKRGF-----LEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 S + T +RG LE SN + + +I + + F + + + ++ Sbjct: 648 FSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQRGFQANSKAVTTSD 707 Query: 232 KSMLEAIR 239 + + + Sbjct: 708 QILNTLLN 715 >gi|308063336|gb|ADO05223.1| flagellar hook protein FlgE [Helicobacter pylori Sat464] Length = 718 Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 66/197 (33%), Gaps = 15/197 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G+ A + L ++N++N +T GF+ + F +++ + Sbjct: 1 MLRSLWSGVNGMQAHQIALDIESNNIANVNTTGFKYSRASFVDMLSQVKLIATAPYKNGL 60 Query: 49 -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGR 105 + V G+ +T + D A++GD +F + RGI TRDG Sbjct: 61 AGQNDFSVGLGVGVDATTKIFSQGNIQNTDVKTDLAIQGDGFFIISPDRGITRNFTRDGE 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 F GSLV+ G + + + + + + I + Sbjct: 121 FLFDSQGSLVTTGGLVVQGWVRNGSDTGNKGSDTDALKVDNTGPLENIRIDPGMVMPARA 180 Query: 166 SQGFVRRENSGISPNIP 182 S R N + Sbjct: 181 SNRISMRANLNAGRHAD 197 Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 14/128 (10%), Positives = 40/128 (31%), Gaps = 5/128 (3%) Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + + + + + V + + +A + L + G + Sbjct: 588 SETYAIEQNGYQAGDLMDVRFDSDGVLLGAFSNGRTLALAQVALANFANDAGLQALGGNV 647 Query: 177 ISPNIPPTPLEDLSGVTVKRGF-----LEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 S + T +RG LE SN + + +I + + F + + + ++ Sbjct: 648 FSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQRGFQANSKAVTTSD 707 Query: 232 KSMLEAIR 239 + + + Sbjct: 708 QILNTLLN 715 >gi|237755390|ref|ZP_04584017.1| flagellar basal body and hook protein FlgE [Sulfurihydrogenibium yellowstonense SS-5] gi|237692431|gb|EEP61412.1| flagellar basal body and hook protein FlgE [Sulfurihydrogenibium yellowstonense SS-5] Length = 413 Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 36/162 (22%), Positives = 67/162 (41%), Gaps = 8/162 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV-------VGAIKNDID 53 M SF + +Q L+ ++DN++N +T+GF++ +V F ++ Sbjct: 1 MLQSFYTAITGLNGNQQWLNVISDNIANVNTIGFKSERVTFEDLIAHSLTTFANNTPKNT 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDG 112 + GSF++T + D AL+G+ +F ++ +G TR G+F++ DG Sbjct: 61 EIGGGSFIALTTKDFSQGSFMNTNSPTDLALDGEGFFMVKDNQGTVYYTRAGQFRLNADG 120 Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV 154 LV+ G I + NV + K+ Sbjct: 121 DLVNVDGMKLQGWTLDDKGNIIGALDKINVPYAINPTITTKI 162 Score = 79.9 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 31/197 (15%), Positives = 63/197 (31%), Gaps = 9/197 (4%) Query: 52 IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGR------ 105 ++ + + + L+F G+ + LT Sbjct: 214 TNESSTGSTWKVYVYMDNDLTTQVGSSTLNFDTNGNLTSGSPFTLSLTLTNGATSPQSIT 273 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 V+ + S Y D + I + + + K IA + + + Sbjct: 274 VDVSKIKQVASDFIFYANQDGFAKGDLIGVAVAEDGIIKGMYSNGNVKNIARLAVATFKD 333 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGV---TVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222 + VR+ N+ PN G V+ GFLE SN + E +I + + + Sbjct: 334 KEMLVRKGNNLYLPNTQTFTPIITPGGILSKVRSGFLELSNVDISREFINLITAQRAYQA 393 Query: 223 ITTLIDENEKSMLEAIR 239 +I +++ + EA+ Sbjct: 394 NARVITTDDQILQEAMN 410 >gi|308184654|ref|YP_003928787.1| flagellar hook protein FlgE [Helicobacter pylori SJM180] gi|308060574|gb|ADO02470.1| flagellar hook protein FlgE [Helicobacter pylori SJM180] Length = 718 Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 66/197 (33%), Gaps = 15/197 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G+ A + L ++N++N +T GF+ + F +++ + Sbjct: 1 MLRSLWSGVNGMQAHQIALDIESNNIANVNTTGFKYSRASFVDMLSQVKLIATAPYKNGL 60 Query: 49 -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGR 105 + V G+ +T + D A++GD +F + RGI TRDG Sbjct: 61 AGQNDFSVGLGVGVDATTKIFSQGNIQNTDVKTDLAIQGDGFFIISPDRGITRNFTRDGE 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 F GSLV+ G + + + + + + I + Sbjct: 121 FLFDSQGSLVTTGGLVVQGWVRNGSDTGNKGSDTDALKVDNTGPLENIRIDPGMVMPARA 180 Query: 166 SQGFVRRENSGISPNIP 182 S R N + Sbjct: 181 SNRISMRANLNAGRHAD 197 Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 14/128 (10%), Positives = 40/128 (31%), Gaps = 5/128 (3%) Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + + + + + V + + +A + L + G + Sbjct: 588 SETYAIEQNGYQAGDLMDVRFDSDGVLLGAFSNGRTLALAQVALANFANDAGLQALGGNV 647 Query: 177 ISPNIPPTPLEDLSGVTVKRGF-----LEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 S + T +RG LE SN + + +I + + F + + + ++ Sbjct: 648 FSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQRGFQANSKAVTTSD 707 Query: 232 KSMLEAIR 239 + + + Sbjct: 708 QILNTLLN 715 >gi|32490791|ref|NP_871045.1| hypothetical protein WGLp042 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25165997|dbj|BAC24188.1| flgF [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 246 Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 42/246 (17%), Positives = 88/246 (35%), Gaps = 9/246 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A ++ R S A+N+SN T GF+ S ++ D F Sbjct: 1 MDKAIYTAMNAAISYADRHSINANNLSNISTSGFKFHIP--SSKYITVRGDSFITRVFPT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + +K G+ +G LD A+ G+ W A++ T++G K+ ++G ++ Sbjct: 59 ATTSTHNKNPGNVNYSGNNLDVAILGEGWLAIQLEDGSEGYTKNGHIKINEEG-KLTIKN 117 Query: 120 KYPVLDMASVPIQIPQKD----EIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 + P D + G + + L + + Sbjct: 118 FPVIGSENGALEVTPGSDLTISSDGTISAIGPGESSKSITSVGKLKLAKSDLNDLELNEN 177 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 GI + L+ + + E+SN +++ + ++I ++ F LI ++ Sbjct: 178 GIFISKNNKILQSDESIRLIPNAFEESNVSAVDSIIKIIDDSRNFEMQMKLISNISEN-S 236 Query: 236 EAIRNI 241 + I Sbjct: 237 KISNQI 242 >gi|332673326|gb|AEE70143.1| flagellar hook protein FlgE [Helicobacter pylori 83] Length = 718 Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 66/197 (33%), Gaps = 15/197 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G+ A + L ++N++N +T GF+ + F +++ + Sbjct: 1 MLRSLWSGVNGMQAHQIALDIESNNIANVNTTGFKYSRASFVDMLSQVKLIATAPYKNGL 60 Query: 49 -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGR 105 + V G+ +T + D A++GD +F + RGI TRDG Sbjct: 61 AGQNDFSVGLGVGVDATTKIFSQGNIQNTDVKTDLAIQGDGFFIISPDRGITRNFTRDGE 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 F GSLV+ G + + + + + + I + Sbjct: 121 FLFDSQGSLVTTGGLVVQGWVRNGSDTGNKGSDTDALKVDNTGPLENIRIDPGMVMPARA 180 Query: 166 SQGFVRRENSGISPNIP 182 S R N + Sbjct: 181 SNRISMRANLNAGRHAD 197 Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 14/128 (10%), Positives = 40/128 (31%), Gaps = 5/128 (3%) Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + + + + + V + + +A + L + G + Sbjct: 588 SETYAIEQNGYQAGDLMDVRFDSDGVLLGAFSNGRTLALAQVALANFANDAGLQALGGNV 647 Query: 177 ISPNIPPTPLEDLSGVTVKRGF-----LEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 S + T +RG LE SN + + +I + + F + + + ++ Sbjct: 648 FSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQRGFQANSKAVTTSD 707 Query: 232 KSMLEAIR 239 + + + Sbjct: 708 QILNTLLN 715 >gi|261837904|gb|ACX97670.1| flagellar hook protein [Helicobacter pylori 51] Length = 718 Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 66/197 (33%), Gaps = 15/197 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G+ A + L ++N++N +T GF+ + F +++ + Sbjct: 1 MLRSLWSGVNGMQAHQIALDIESNNIANVNTTGFKYSRASFVDMLSQVKLIATAPYKNGL 60 Query: 49 -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGR 105 + V G+ +T + D A++GD +F + RGI TRDG Sbjct: 61 AGQNDFSVGLGVGVDATTKIFSQGNIQNTDVKTDLAIQGDGFFIISPDRGITHNFTRDGE 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 F GSLV+ G + + + + + + I + Sbjct: 121 FLFDSQGSLVTTGGLVVQGWVRNGSDTGNKGSDTDALKVDNTGPLENIRIDPGMVMPARA 180 Query: 166 SQGFVRRENSGISPNIP 182 S R N + Sbjct: 181 SNRISMRANLNAGRHAD 197 Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 14/128 (10%), Positives = 40/128 (31%), Gaps = 5/128 (3%) Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + + + + + V + + +A + L + G + Sbjct: 588 SETYAIEQNGYQAGDLMDVRFDSDGVLLGAFSNGRTLALAQVALANFANDAGLQALGGNV 647 Query: 177 ISPNIPPTPLEDLSGVTVKRGF-----LEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 S + T +RG LE SN + + +I + + F + + + ++ Sbjct: 648 FSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQRGFQANSKAVTTSD 707 Query: 232 KSMLEAIR 239 + + + Sbjct: 708 QILNTLLN 715 >gi|312621577|ref|YP_004023190.1| fagellar hook-basal body protein [Caldicellulosiruptor kronotskyensis 2002] gi|312202044|gb|ADQ45371.1| fagellar hook-basal body protein [Caldicellulosiruptor kronotskyensis 2002] Length = 488 Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 65/155 (41%), Gaps = 15/155 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S ++A A + R+ + DN++N +TVGF++ +V F+ V ++ Sbjct: 1 MMRSMFSSISALRAHQTRMDVIGDNIANVNTVGFKSSRVTFASVFASVLKSASAPDTASG 60 Query: 49 --KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGR 105 ++ Q V+ ++ GS T D A+EGD +F + + TR G Sbjct: 61 RGGSNPMQIGLGVSVASVDMNMTRGSLQRTDNPTDLAIEGDGFFVVGGDGKAPRFTRAGN 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF 140 F + G+LV+A+G + M + Sbjct: 121 FSLDKMGNLVTATGLNVLGWMYDPVNNQIDTTKSP 155 Score = 87.6 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 21/210 (10%), Positives = 55/210 (26%), Gaps = 6/210 (2%) Query: 36 TIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP 95 + F + + ++ + +A + + Sbjct: 276 RGTITFGQAGKVLDDENTPDVEGIAITGGRFINTQDGTFTINFKNSVVNPVTLKVNSSQF 335 Query: 96 RGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQK-GKV 154 T F S + + + G S ++ Sbjct: 336 DVNDATNIAFFLKNITQFGNMESSIRVAQMTGYSAGSLQGFNVDASGKITGVYSNGLNQL 395 Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYE 209 I + + + G R ++ + E + T+ +G LE SN + E Sbjct: 396 IGQIAIATFANPAGLQRIGDNLYINTVNSGDPEIGTPGSGSRGTISQGTLEMSNVDLAKE 455 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 MI + + + +I +++ + + + Sbjct: 456 FTDMIVTQRGYQANARVITASDELLQDLVN 485 >gi|317177302|dbj|BAJ55091.1| flagellar hook protein FlgE [Helicobacter pylori F16] Length = 718 Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 66/197 (33%), Gaps = 15/197 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G+ A + L ++N++N +T GF+ + F +++ + Sbjct: 1 MLRSLWSGVNGMQAHQIALDIESNNIANVNTTGFKYSRASFVDMLSQVKLIATAPYKNGL 60 Query: 49 -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGR 105 + V G+ +T + D A++GD +F + RGI TRDG Sbjct: 61 AGQNDFSVGLGVGVDATTKIFSQGNIQNTDVKTDLAIQGDGFFIISPDRGITRNFTRDGE 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 F GSLV+ G + + + + + + I + Sbjct: 121 FLFDSQGSLVTTGGLVVQGWVRNGSDTGNKGSDTDALKVDNTGPLENIRIDPGMVMPARA 180 Query: 166 SQGFVRRENSGISPNIP 182 S R N + Sbjct: 181 SNRISMRANLNAGRHAD 197 Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 14/128 (10%), Positives = 40/128 (31%), Gaps = 5/128 (3%) Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + + + + + V + + +A + L + G + Sbjct: 588 SETYAIEQNGYQAGDLMDVRFDSDGVLLGAFSNGRTLALAQVALANFANDAGLQALGGNV 647 Query: 177 ISPNIPPTPLEDLSGVTVKRGF-----LEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 S + T +RG LE SN + + +I + + F + + + ++ Sbjct: 648 FSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQRGFQANSKAVTTSD 707 Query: 232 KSMLEAIR 239 + + + Sbjct: 708 QILNTLLN 715 >gi|297380070|gb|ADI34957.1| flagellar hook protein FlgE [Helicobacter pylori v225d] gi|315586465|gb|ADU40846.1| flagellar hook protein FlgE [Helicobacter pylori 35A] gi|317182178|dbj|BAJ59962.1| flagellar hook protein FlgE [Helicobacter pylori F57] Length = 718 Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 66/197 (33%), Gaps = 15/197 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G+ A + L ++N++N +T GF+ + F +++ + Sbjct: 1 MLRSLWSGVNGMQAHQIALDIESNNIANVNTTGFKYSRASFVDMLSQVKLIATAPYKNGL 60 Query: 49 -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGR 105 + V G+ +T + D A++GD +F + RGI TRDG Sbjct: 61 AGQNDFSVGLGVGVDATTKIFSQGNIQNTDVKTDLAIQGDGFFIISPDRGITRNFTRDGE 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 F GSLV+ G + + + + + + I + Sbjct: 121 FLFDSQGSLVTTGGLVVQGWVRNGSDTGNKGSDTDALKVDNTGPLENIRIDPGMVMPARA 180 Query: 166 SQGFVRRENSGISPNIP 182 S R N + Sbjct: 181 SNRISMRANLNAGRHAD 197 Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 14/128 (10%), Positives = 40/128 (31%), Gaps = 5/128 (3%) Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + + + + + V + + +A + L + G + Sbjct: 588 SETYAIEQNGYQAGDLMDVRFDSDGVLLGAFSNGRTLALAQVALANFANDAGLQALGGNV 647 Query: 177 ISPNIPPTPLEDLSGVTVKRGF-----LEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 S + T +RG LE SN + + +I + + F + + + ++ Sbjct: 648 FSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQRGFQANSKAVTTSD 707 Query: 232 KSMLEAIR 239 + + + Sbjct: 708 QILNTLLN 715 >gi|188527285|ref|YP_001909972.1| flagellar hook protein FlgE [Helicobacter pylori Shi470] gi|188143525|gb|ACD47942.1| flagellar hook protein FlgE [Helicobacter pylori Shi470] gi|308062194|gb|ADO04082.1| flagellar hook protein FlgE [Helicobacter pylori Cuz20] Length = 718 Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 66/197 (33%), Gaps = 15/197 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G+ A + L ++N++N +T GF+ + F +++ + Sbjct: 1 MLRSLWSGVNGMQAHQIALDIESNNIANVNTTGFKYSRASFVDMLSQVKLIATAPYKNGL 60 Query: 49 -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGR 105 + V G+ +T + D A++GD +F + RGI TRDG Sbjct: 61 AGQNDFSVGLGVGVDATTKIFSQGNIQNTDVKTDLAIQGDGFFIISPDRGITRNFTRDGE 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 F GSLV+ G + + + + + + I + Sbjct: 121 FLFDSQGSLVTTGGLVVQGWVRNGSDTGNKGSDTDALKVDNTGPLENIRIDPGMVMPARA 180 Query: 166 SQGFVRRENSGISPNIP 182 S R N + Sbjct: 181 SNRISMRANLNAGRHAD 197 Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 14/128 (10%), Positives = 40/128 (31%), Gaps = 5/128 (3%) Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + + + + + V + + +A + L + G + Sbjct: 588 SETYAIEQNGYQAGDLMDVRFDSDGVLLGAFSNGRTLALAQVALANFANDAGLQALGGNV 647 Query: 177 ISPNIPPTPLEDLSGVTVKRGF-----LEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 S + T +RG LE SN + + +I + + F + + + ++ Sbjct: 648 FSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQRGFQANSKAVTTSD 707 Query: 232 KSMLEAIR 239 + + + Sbjct: 708 QILNTLLN 715 >gi|317011083|gb|ADU84830.1| flagellar hook protein FlgE [Helicobacter pylori SouthAfrica7] Length = 718 Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 66/197 (33%), Gaps = 15/197 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G+ A + L ++N++N +T GF+ + F +++ + Sbjct: 1 MLRSLWSGVNGMQAHQIALDIESNNIANVNTTGFKYSRASFVDMLSQVKLIATAPYKNGL 60 Query: 49 -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGR 105 + V G+ +T + D A++GD +F + RGI TRDG Sbjct: 61 AGQNDFSVGLGVGVDATTKIFSQGNIQNTDVKTDLAIQGDGFFIISPDRGITRNFTRDGE 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 F GSLV+ G + + + + + + I + Sbjct: 121 FLFDSQGSLVTTGGLVVQGWVRNGSDTGNKGSDTDALKVDNTGPLENIRIDPGMVMPARA 180 Query: 166 SQGFVRRENSGISPNIP 182 S R N + Sbjct: 181 SNRISMRANLNAGRHAD 197 Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 14/128 (10%), Positives = 40/128 (31%), Gaps = 5/128 (3%) Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + + + + + V + + +A + L + G + Sbjct: 588 SETYAIEQNGYQAGDLMDVRFDSDGVLLGAFSNGRTLALAQVALANFANDAGLQALGGNV 647 Query: 177 ISPNIPPTPLEDLSGVTVKRGF-----LEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 S + T +RG LE SN + + +I + + F + + + ++ Sbjct: 648 FSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQRGFQANSKAVTTSD 707 Query: 232 KSMLEAIR 239 + + + Sbjct: 708 QILNTLLN 715 >gi|308183024|ref|YP_003927151.1| flagellar hook protein FlgE [Helicobacter pylori PeCan4] gi|308065209|gb|ADO07101.1| flagellar hook protein FlgE [Helicobacter pylori PeCan4] Length = 718 Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 66/197 (33%), Gaps = 15/197 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G+ A + L ++N++N +T GF+ + F +++ + Sbjct: 1 MLRSLWSGVNGMQAHQIALDIESNNIANVNTTGFKYSRASFVDMLSQVKLIATAPYKNGL 60 Query: 49 -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGR 105 + V G+ +T + D A++GD +F + RGI TRDG Sbjct: 61 AGQNDFSVGLGVGVDATTKIFSQGNIQNTDVKTDLAIQGDGFFIISPDRGITRNFTRDGE 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 F GSLV+ G + + + + + + I + Sbjct: 121 FLFDSQGSLVTTGGLVVQGWVRNGSDTGNKGSDTDALKVDNTGPLENIRIDPGMVMPARA 180 Query: 166 SQGFVRRENSGISPNIP 182 S R N + Sbjct: 181 SNRISMRANLNAGRHAD 197 Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 14/128 (10%), Positives = 40/128 (31%), Gaps = 5/128 (3%) Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + + + + + V + + +A + L + G + Sbjct: 588 SETYAIEQNGYQAGDLMDVRFDSDGVLLGAFSNGRTLALAQVALANFANDAGLQALGGNV 647 Query: 177 ISPNIPPTPLEDLSGVTVKRGF-----LEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 S + T +RG LE SN + + +I + + F + + + ++ Sbjct: 648 FSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQRGFQANSKAVTTSD 707 Query: 232 KSMLEAIR 239 + + + Sbjct: 708 QILNTLLN 715 >gi|302670727|ref|YP_003830687.1| flagellar hook protein FlgE1 [Butyrivibrio proteoclasticus B316] gi|302395200|gb|ADL34105.1| flagellar hook protein FlgE1 [Butyrivibrio proteoclasticus B316] Length = 1049 Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 63/166 (37%), Gaps = 13/166 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG---AIKNDIDQKIS 57 M S G+A + ++ + +N++N +T F++ + FS+++ + + Sbjct: 1 MMRSLYSGVAGLKTHQTKMDVIGNNIANVNTTSFKSQSITFSDLMYQTTQTASGATETKG 60 Query: 58 FVASGK----------EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107 V + + G+ +T D + G+++F + + + TRDG F Sbjct: 61 GVNARQIGLGAKSGAINTAITSQGATQTTNNPFDIMITGESFFIVNNGNENLYTRDGSFY 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK 153 V G+L S Y V +V + + I G + Sbjct: 121 VDGAGNLAMQSNGYLVQGWKAVEDRDTGEITISKGELTGLQIMSPE 166 Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 17/150 (11%), Positives = 47/150 (31%), Gaps = 5/150 (3%) Query: 95 PRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ-KGK 153 I + + ++ + G L+ ++ + S + K Sbjct: 897 NITIDFSTVTNYNTNGSSTIKAVKGDKKSLNTGRAVGEMNGVSISTDGQIYATYSNGQTK 956 Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT----VKRGFLEDSNANSMYE 209 ++ + + G + ++ + + T + G LE SN + + Sbjct: 957 LLGQIASAEFANASGLSKEGDNLYASTLNSGEATVQDITTDGGYMNTGVLEMSNVDLSSQ 1016 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +MI + F + + +I ++ + E Sbjct: 1017 FTEMITTQRGFQANSRIITVSDTLLEELTN 1046 >gi|152997582|ref|YP_001342417.1| hypothetical protein Mmwyl1_3580 [Marinomonas sp. MWYL1] gi|150838506|gb|ABR72482.1| protein of unknown function DUF1078 domain protein [Marinomonas sp. MWYL1] Length = 565 Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 3/124 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI---KNDIDQKISFVA 60 FN L+ A LS +N++N DT GF+ +++F ++ + S V+ Sbjct: 2 GFNTALSGIKASADYLSVTGNNIANADTTGFKKSRIEFDDLYNTSVLGAGSGNNIGSGVS 61 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 K G+ T LD A++G +F +++ TR G FK+ ++G LV+ SG Sbjct: 62 VSKVSQEFSSGNLSYTDNNLDLAIDGSGFFVIDAGIANAYTRAGNFKLDENGFLVTNSGN 121 Query: 121 YPVL 124 Sbjct: 122 NVQG 125 Score = 76.1 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 16/143 (11%), Positives = 43/143 (30%), Gaps = 5/143 (3%) Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLY 161 R + + A+ + S + + +Q+ + + L Sbjct: 421 RITQLDLAGSTQFALANTDTFEQNGFSAGELQGVSFDSDGLLIANYTNQQTATLGQIALA 480 Query: 162 SVDMSQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHL 216 + D + G + ++ P + + G LE+SN + E+ +I Sbjct: 481 TFDSTDGLMPSGHTMWVATKTSGPADIGRPNSATLGKIAGGALEESNVDLTAELVALIEA 540 Query: 217 TQKFNSITTLIDENEKSMLEAIR 239 + + + + ++ I Sbjct: 541 QRNYQANSKTLETENTVTQTIIN 563 >gi|283955493|ref|ZP_06372988.1| flagellar hook protein flgE [Campylobacter jejuni subsp. jejuni 1336] gi|283792954|gb|EFC31728.1| flagellar hook protein flgE [Campylobacter jejuni subsp. jejuni 1336] Length = 545 Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 49/218 (22%), Positives = 85/218 (38%), Gaps = 11/218 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI----KNDIDQKI 56 M SF G++ + A+N++N +T GF+ +F ++ + + Q Sbjct: 1 MMNSFYNGISGVKTNSFGIDIYANNIANVNTTGFKYSDAQFKDIFYSTITTQSTNPAQGG 60 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLV 115 S + E GS +++ +E D AL+G +F + G TR+G FK +G LV Sbjct: 61 YGSGSASSNVVFEQGSLVASDSEFDVALQGKGFFGVLGADGNAYYTRNGSFKRDANGYLV 120 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 + G + + M I D + G G+ G ++ + + S G + Sbjct: 121 DSYGNFVLGTMNPAFTGINYSDRV--AGLMGDYLNTGTLVNNGFTVNSNNSFGIGTTASQ 178 Query: 176 GISPNIPPTPLEDLSGVTVK-RGFLEDSNANSMYEMGQ 212 G L VK G L N N+ E+ + Sbjct: 179 GAIKVPVNMYLPPQVTQNVKWSGSL---NTNTTTEVVK 213 Score = 71.8 bits (174), Expect = 8e-11, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 7/124 (5%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 D + + K ++ + LY+ QG ++ + Sbjct: 419 QQDGVAEGFFKQYDISDDGSIVAQFSNGKNAIVGKLALYNFINEQGLAAMGDNIFAATAN 478 Query: 183 P-------TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 + ++ K GFLE SN + E+ +I + F++ + I +++ + Sbjct: 479 SGDASFIMKNGQIVNTAKFKGGFLEQSNVDLSVELSNLIVTQKAFDASSKSITTSDQMIQ 538 Query: 236 EAIR 239 +AI Sbjct: 539 KAIN 542 >gi|229096257|ref|ZP_04227230.1| Flagellar basal-body rod protein flgG [Bacillus cereus Rock3-29] gi|229115212|ref|ZP_04244622.1| Flagellar basal-body rod protein flgG [Bacillus cereus Rock1-3] gi|228668352|gb|EEL23784.1| Flagellar basal-body rod protein flgG [Bacillus cereus Rock1-3] gi|228687217|gb|EEL41122.1| Flagellar basal-body rod protein flgG [Bacillus cereus Rock3-29] Length = 267 Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 42/265 (15%), Positives = 84/265 (31%), Gaps = 25/265 (9%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DID 53 IG + QR++ ++N++N T GF+ + + +I Sbjct: 1 MNGLYIGSMGMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAMTNIG 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDF-----ALEGDAWFALESPRGIILTRDGRFKV 108 V +++ G+ T + DF A ++F LTRDG F + Sbjct: 61 SVDYAVVPAATHVNLVQGNVQITNSATDFFLDDGAAGTSSFFVTSKNDETFLTRDGSFTL 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV----- 163 D L ++SG Y + + + + + + + Sbjct: 121 NSDRYLQTSSGAYVMDVNNERIRIPENVNFFVSNNGEIYREINEGTLQKPDIKRIVIAQL 180 Query: 164 -------DMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + + V+REN + VK LE+SN + EM ++ Sbjct: 181 QTKTVDAETNARLVQRENKSFTLAEGNIANLPNGTGIVKNHMLENSNVDMTKEMADLMSS 240 Query: 217 TQKFNSITTLIDENEKSMLEAIRNI 241 + + ++ +K + I Sbjct: 241 QKMIQASQRIMTSFDKIYEKEANEI 265 >gi|600725|gb|AAA92803.1| flagellar hook FlgE [Helicobacter pylori] Length = 718 Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 66/197 (33%), Gaps = 15/197 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G+ A + L ++N++N +T GF+ + F +++ + Sbjct: 1 MLRSLWSGVNGMQAHQIALDIESNNIANVNTTGFKYSRASFVDMLSQVKLIATAPYKNGL 60 Query: 49 -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGR 105 + V G+ +T + D A++GD +F + RGI TRDG Sbjct: 61 AGQNDFSVGLGVGVDATTKIFSQGNIQNTDVKTDLAIQGDGFFIINPDRGITRNFTRDGE 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 F GSLV+ G + + + + + + I + Sbjct: 121 FLFDSQGSLVTTGGLVVQGWVRNGSDTGNKGSDTDALKVDNTGPLENIRIDPGMVMPARA 180 Query: 166 SQGFVRRENSGISPNIP 182 S R N + Sbjct: 181 SNRISMRANLNAGRHAD 197 Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 14/128 (10%), Positives = 40/128 (31%), Gaps = 5/128 (3%) Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + + + + + V + + +A + L + G + Sbjct: 588 SETYAIEQNGYQAGDLMDVRFDSDGVLLGAFSNGRTLALAQVALANFANDAGLQALGGNV 647 Query: 177 ISPNIPPTPLEDLSGVTVKRGF-----LEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 S + T +RG LE SN + + +I + + F + + + ++ Sbjct: 648 FSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQRGFQANSKAVTTSD 707 Query: 232 KSMLEAIR 239 + + + Sbjct: 708 QILNTLLN 715 >gi|109947758|ref|YP_664986.1| flagellar hook protein FlgE [Helicobacter acinonychis str. Sheeba] gi|109714979|emb|CAJ99987.1| flagellar hook protein [Helicobacter acinonychis str. Sheeba] Length = 718 Score = 96.9 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 66/197 (33%), Gaps = 15/197 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G+ A + L ++N++N +T GF+ + F +++ + Sbjct: 1 MLRSLWSGVNGMQAHQIALDIESNNIANVNTTGFKYSRASFVDMLSQVKLIATAPYKNGL 60 Query: 49 -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGR 105 + V G+ +T + D A++GD +F + RGI TRDG Sbjct: 61 AGQNDFSVGLGVGVDATTKIFSQGNIQNTDVKTDLAIQGDGFFIISPDRGITRNFTRDGE 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 F GSLV+ G + + + + + + I + Sbjct: 121 FLFDSQGSLVTTGGLVVQGWVRNGNDTGNKGSDTDALKVDNTGPLENIRIDPGMVMPARA 180 Query: 166 SQGFVRRENSGISPNIP 182 S R N + Sbjct: 181 SNRISMRANLNAGRHAD 197 Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 14/128 (10%), Positives = 40/128 (31%), Gaps = 5/128 (3%) Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + + + + + V + + +A + L + G + Sbjct: 588 SETYAIEQNGYQAGDLMDVRFDSDGVLLGAFSNGRTLALAQVALANFANDAGLQALGGNV 647 Query: 177 ISPNIPPTPLEDLSGVTVKRGF-----LEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 S + T +RG LE SN + + +I + + F + + + ++ Sbjct: 648 FSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQRGFQANSKAVTTSD 707 Query: 232 KSMLEAIR 239 + + + Sbjct: 708 QILNTLLN 715 >gi|208434779|ref|YP_002266445.1| flagellar hook protein [Helicobacter pylori G27] gi|208432708|gb|ACI27579.1| flagellar hook protein [Helicobacter pylori G27] Length = 718 Score = 96.9 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 66/197 (33%), Gaps = 15/197 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G+ A + L ++N++N +T GF+ + F +++ + Sbjct: 1 MLRSLWSGVNGMQAHQIALDIESNNIANVNTTGFKYSRASFVDMLSQVKLIATAPYKNGL 60 Query: 49 -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGR 105 + V G+ +T + D A++GD +F + RGI TRDG Sbjct: 61 AGQNDFSVGLGVGVDATTKIFSQGNIQNTDVKTDLAIQGDGFFIISPDRGITRNFTRDGE 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 F GSLV+ G + + + + + + I + Sbjct: 121 FLFDSQGSLVTTGGLVVQGWVRNGSDTGNKGSDTDALKVDNTGPLENIRIDPGMVMPARA 180 Query: 166 SQGFVRRENSGISPNIP 182 S R N + Sbjct: 181 SNRISMRANLNAGRHAD 197 Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 14/128 (10%), Positives = 40/128 (31%), Gaps = 5/128 (3%) Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + + + + + V + + +A + L + G + Sbjct: 588 SETYAIEQNGYQAGDLMDVRFDSDGVLLGAFSNGRTLALAQVALANFANDAGLQALGGNV 647 Query: 177 ISPNIPPTPLEDLSGVTVKRGF-----LEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 S + T +RG LE SN + + +I + + F + + + ++ Sbjct: 648 FSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQRGFQANSKAVTTSD 707 Query: 232 KSMLEAIR 239 + + + Sbjct: 708 QILNTLLN 715 >gi|167630298|ref|YP_001680797.1| flagellar hook protein [Heliobacterium modesticaldum Ice1] gi|167593038|gb|ABZ84786.1| flagellar hook protein [Heliobacterium modesticaldum Ice1] Length = 442 Score = 96.9 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 28/137 (20%), Positives = 50/137 (36%), Gaps = 12/137 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M S G+ A + R+ T+ +N++N +T+GF+ +V F++ + Sbjct: 1 MMRSLFSGVTALRNHQTRMDTIGNNIANVNTIGFKKSRVTFADALNQTIRGASSPQGGRG 60 Query: 61 SGKEYL------------SKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 S TG D A+EGD +F L+ TR G F + Sbjct: 61 GTNPMQVGLGMNIATMETVFTPASVQGTGKNSDLAIEGDGFFLLDDGGARYYTRAGNFDL 120 Query: 109 TDDGSLVSASGKYPVLD 125 + + + V+ Sbjct: 121 DTEYNFIRTDNGMKVMG 137 Score = 81.8 bits (200), Expect = 7e-14, Method: Composition-based stats. Identities = 13/98 (13%), Positives = 34/98 (34%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLED 201 + + + +A + + + G + ++ + + G LE Sbjct: 342 YSNGQNRKMAQVAVTTFSNPAGLFKAGSNLYTRTNNSGEPKTGQPAVGGRGAITPGALEM 401 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E MI + F + + +I ++ + E + Sbjct: 402 SNVDLSQEFTDMITTQRGFQANSRIISVSDSMLEELVN 439 >gi|313673416|ref|YP_004051527.1| fagellar hook-basal body protein [Calditerrivibrio nitroreducens DSM 19672] gi|312940172|gb|ADR19364.1| fagellar hook-basal body protein [Calditerrivibrio nitroreducens DSM 19672] Length = 822 Score = 96.9 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 29/179 (16%), Positives = 59/179 (32%), Gaps = 14/179 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50 M S ++ ++ + + +N+SN +TVG++ ++ F +++ + Sbjct: 1 MLRSLYSAVSGLSQHQKAMDVLGNNVSNVNTVGYKASRLTFKDLMSQTVSIGKAPSGNIG 60 Query: 51 --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI--ILTRDGRF 106 + Q G+F +TG D A++G +F + + TR G F Sbjct: 61 GINPLQIGLGTNVASVDNIFLQGTFQTTGVTTDLAIDGKGFFIVRGEQQTERYYTRAGNF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 G LV+ G M + + + G T + Sbjct: 121 SFDRQGYLVNPEGFRVQGWMTDLTTGQLLNNADITDIQMGAAQMTLAAKQTSEVTLAGN 179 Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 36/92 (39%), Gaps = 5/92 (5%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSM 207 K++ + + +G R +S S ++ G +E+SN + Sbjct: 728 KILGQIAVAIFTNQEGLARVGSSLFSETPNSGLAAIGVAGAGGRGVIQSGAVENSNVDIA 787 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E MI + + + + + +I +++ + E + Sbjct: 788 QEFVTMITVQRGYQTNSRVITTSDEMLQELLN 819 >gi|228933056|ref|ZP_04095919.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228826657|gb|EEM72428.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 249 Score = 96.9 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 42/246 (17%), Positives = 85/246 (34%), Gaps = 15/246 (6%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DIDQKISFVASG 62 + QR++ ++N++N T GF+ + + +I V Sbjct: 2 GMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIGSVDYAVVPA 61 Query: 63 KEYLSKEVGSFISTGTELDFALEGDA-----WFALESPRGIILTRDGRFKVTDDGSLVSA 117 +++ G+ T ++ DF L+ +F LTRDG F + D L + Sbjct: 62 ATHVNLVQGNIQMTNSDTDFLLDDGTAGTASFFVTSKNNETFLTRDGSFTLNSDRYLQTT 121 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV--DMSQGFVRRENS 175 SG + + + + IA + +V + + ++REN Sbjct: 122 SGAFVMGENHERIRIPEGAKVAVQADGTLYDAVTQNNIARLQTKTVGAEANNRLIQRENK 181 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 + TVK LE+SN + EM ++ + ++ ++ +K Sbjct: 182 SFTLAEGNIADLPNGVGTVKNYMLENSNVDMTKEMADLMTDQRMISASQRVMTSFDKIYE 241 Query: 236 EAIRNI 241 + I Sbjct: 242 KEANEI 247 >gi|307719964|ref|YP_003891104.1| flagellar hook protein FlgE [Sulfurimonas autotrophica DSM 16294] gi|306978057|gb|ADN08092.1| flagellar hook protein FlgE [Sulfurimonas autotrophica DSM 16294] Length = 709 Score = 96.9 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 37/222 (16%), Positives = 73/222 (32%), Gaps = 15/222 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G++ + + + ++N++N +TVGF+ + FS+++ Sbjct: 1 MLKSLFSGVSGLQSHQVAMDVESNNIANVNTVGFKYSRANFSDLLAQTKAIATAPQGQLG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGRF 106 + Q GS ++ D A++GD +F + G TR G F Sbjct: 61 GKNPVQVGLGSTVSSMTRIFSQGSIQNSDKNTDVAIQGDGFFIISPDGGNTYKYTRAGDF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPI-QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 K G+ V +G + ++ I N+ ++ + + L + Sbjct: 121 KFDAGGNFVDNNGFIAQGWLRDPVTGKVDSTAPIENINIAPGLTTPAQPTQEVVLKANLN 180 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSM 207 S V + L + +E N M Sbjct: 181 SGAIVESFSPAYQVPTGAPTDPALPAIDGNGNPIESGNVGVM 222 Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 14/120 (11%), Positives = 39/120 (32%), Gaps = 5/120 (4%) Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183 D + + + + + + +A +G+ ++G + Sbjct: 586 QDGYTGGDLVGIRIDQSGTLVGSFSNGRSFGLAQIGMAKFTNNEGLSTEGGNVYVQTANS 645 Query: 184 TPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 + T ++ LE SN + + Q+I + + F + I +++ + I Sbjct: 646 GDPIIGTAATAGRGFIQSAALEASNVDLSRALTQLIIIQRGFQANGKTITTSDQLLQTLI 705 >gi|325289233|ref|YP_004265414.1| fagellar hook-basal body protein [Syntrophobotulus glycolicus DSM 8271] gi|324964634|gb|ADY55413.1| fagellar hook-basal body protein [Syntrophobotulus glycolicus DSM 8271] Length = 447 Score = 96.9 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 30/141 (21%), Positives = 61/141 (43%), Gaps = 16/141 (11%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M + ++ A ++++ + +N++N +TV ++ +V FS+++ Sbjct: 1 MMRALFSAVSGLQAHQKKMDVIGNNIANVNTVAYKASRVTFSDILSQTLSSATGADSTSG 60 Query: 49 --KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL--TRDG 104 ++ Q V G GS STG D +++GD +F +++ TR G Sbjct: 61 RGGSNAKQIGLGVGIGSIDTLMTAGSTESTGNSTDLSIDGDGFFIVKNGSTGTYMFTRAG 120 Query: 105 RFKVTDDGSLVSASGKYPVLD 125 F + D G+LV++ G Sbjct: 121 NFSIDDSGNLVTSDGLNVYGW 141 Score = 83.0 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 40/138 (28%), Gaps = 6/138 (4%) Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162 + D V G I I I V G G + L Sbjct: 310 FSNLSTSADDGSVETKGVDGYPSGTLEDISIDSNGIILGVYSNGIEQPLGMI----ALAR 365 Query: 163 VDMSQGFVRRENSGISPNIPPTPLEDL--SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G ++ ++ + + + G LE SN + E QMI + + Sbjct: 366 FANPSGLLKTGSNYYVATANSGEFTNGVMANGALSSGTLEMSNVDLSTEFSQMITTQRGY 425 Query: 221 NSITTLIDENEKSMLEAI 238 + + +I ++ + I Sbjct: 426 QANSRMITTADEMLETII 443 >gi|152990377|ref|YP_001356099.1| flagellar basal body and hook protein FlgE [Nitratiruptor sp. SB155-2] gi|151422238|dbj|BAF69742.1| flagellar basal body and hook protein FlgE [Nitratiruptor sp. SB155-2] Length = 533 Score = 96.9 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 41/204 (20%), Positives = 73/204 (35%), Gaps = 17/204 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS--- 57 M SF G + A + L ++DN++N +T GF+ +V FS++V + + Sbjct: 1 MLQSFYTGNSGLNANKTWLGVISDNIANVNTNGFKQERVNFSDLVASSLTTYSSSGAPRN 60 Query: 58 -----FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG--IILTRDGRFKVTD 110 GSF +T L AL+G+ +F +++P TR G F+V Sbjct: 61 KEIGGGAFVAGTIKDFSQGSFKNTNQPLSLALDGEGFFMVKNPSADLTYYTRAGDFRVDA 120 Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170 +G +++ +G M I N+ + KV + Sbjct: 121 NGDVINPAGLKLQGWMLDETGNIAGAMGSINIPNNLDPKNTDKVA-------FENPANLD 173 Query: 171 RRENSGISPNIPPTPLEDLSGVTV 194 ++ P P T+ Sbjct: 174 AGVDAITKTFDPSDPTTYHYVNTI 197 Score = 78.8 bits (192), Expect = 7e-13, Method: Composition-based stats. Identities = 13/86 (15%), Positives = 32/86 (37%), Gaps = 3/86 (3%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPL---EDLSGVTVKRGFLEDSNANSMYEMG 211 +A + + + + VR+ ++ PN ++ G LE SN + E Sbjct: 443 VARLAVATFKDKEILVRKGDNLYLPNQQTFTPIIVPGGVISKIRSGMLEMSNVDISQEFI 502 Query: 212 QMIHLTQKFNSITTLIDENEKSMLEA 237 +I + + + I +++ + Sbjct: 503 NLITAQRAYQANAKTITTSDQILQTT 528 >gi|167750722|ref|ZP_02422849.1| hypothetical protein EUBSIR_01700 [Eubacterium siraeum DSM 15702] gi|167656401|gb|EDS00531.1| hypothetical protein EUBSIR_01700 [Eubacterium siraeum DSM 15702] Length = 521 Score = 96.9 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 32/137 (23%), Positives = 54/137 (39%), Gaps = 13/137 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-------- 52 M S G++ +Q++ + +N++N +T GF+T F EV K + Sbjct: 1 MVRSLFSGVSGLKTHQQKMDVIGNNIANVNTTGFKTSVTTFQEVYYQTKKNGSAGSNLQG 60 Query: 53 ----DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFK 107 Q G F + + D AL GD +F + I +R G F Sbjct: 61 GVNPSQVGYGTKLGAIGQVMGQSGFTYSDSVYDCALSGDGFFQVMDEAGNIFYSRAGVFN 120 Query: 108 VTDDGSLVSASGKYPVL 124 V + G+LV ++G + Sbjct: 121 VDNAGNLVDSNGNMVLG 137 Score = 84.1 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 23/143 (16%), Positives = 47/143 (32%), Gaps = 10/143 (6%) Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-----IATMGLY 161 +V G + D Q + + + E G I V + + + Sbjct: 376 SNNFFSDMVQLLGNIKMTDGRVAATQTVKDLDSVYINEDGTIYGVHSVHGIIMLGRIDIV 435 Query: 162 SVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + D G + +S + + + +V G LE SN + E MI Sbjct: 436 TFDNPNGLEQVGSSYWRETLSSGQPQVNIAGENGSASVVSGALEMSNVDLSQEFSDMIIT 495 Query: 217 TQKFNSITTLIDENEKSMLEAIR 239 + F + + +I ++ + E + Sbjct: 496 QRGFQANSRIITTSDTMLEEIVN 518 >gi|315125109|ref|YP_004067113.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315018831|gb|ADT66924.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 855 Score = 96.9 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 59/183 (32%), Gaps = 14/183 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G++ A + + +N+SN +T GF+ + F + Sbjct: 1 MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATAPTDGRG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106 ++ Q V+ GS +T D A+ GD +F + LTR G F Sbjct: 61 GSNPLQIGLGVSVSSTTRIHSQGSVQTTDKNTDVAINGDGFFMVSDDGGLTRYLTRSGDF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 K+ G+ V+ +G + Q +T +++ Sbjct: 121 KLDAYGNFVNNAGFVVQGWNINWDTQSIDSSRTPQNIFIDPGMHIPAAKSTEVAIKANLN 180 Query: 167 QGF 169 G Sbjct: 181 SGL 183 Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 17/144 (11%), Positives = 46/144 (31%), Gaps = 5/144 (3%) Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 T + S + +G+ + + + + K +A + + Sbjct: 709 TSGSNDGLVSSNSASTLTGQATDGYTSGNLKPDAIRVDDKGNILGEFTNGKTFAVAKIAM 768 Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIH 215 SV + G + + T +K LE SN + + ++I Sbjct: 769 ASVANNSGLEEIGGNLFKVTANSGNIVVGEAGTGGRGEMKTSALEMSNVDLSRSLTELII 828 Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239 + + + + + I +++ + I+ Sbjct: 829 IQRGYQANSKTISTSDQMLQTLIQ 852 >gi|86152379|ref|ZP_01070589.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni 260.94] gi|85840676|gb|EAQ57928.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni 260.94] Length = 854 Score = 96.9 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 59/183 (32%), Gaps = 14/183 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G++ A + + +N+SN +T GF+ + F + Sbjct: 1 MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATAPTDGRG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106 ++ Q V+ GS +T D A+ GD +F + LTR G F Sbjct: 61 GSNPLQIGLGVSVSSTTRIHSQGSVQTTDKNTDVAINGDGFFMVSDDGGLTRYLTRSGDF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 K+ G+ V+ +G + Q +T +++ Sbjct: 121 KLDAYGNFVNNAGFVVQGWNINWDTQSIDSSRTPQNIFIDPGMHIPAAKSTEVAIKANLN 180 Query: 167 QGF 169 G Sbjct: 181 SGL 183 Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 17/144 (11%), Positives = 46/144 (31%), Gaps = 5/144 (3%) Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 T + S + +G+ + + + + K +A + + Sbjct: 708 TSGSNDGLVSSNSASTLTGQATDGYTSGNLKPDAIRVDDKGNILGEFTNGKTFAVAKIAM 767 Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIH 215 SV + G + + T +K LE SN + + ++I Sbjct: 768 ASVANNSGLEEIGGNLFKVTANSGNIVVGEAGTGGRGEMKTSALEMSNVDLSRSLTELII 827 Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239 + + + + + I +++ + I+ Sbjct: 828 IQRGYQANSKTISTSDQMLQTLIQ 851 >gi|222530130|ref|YP_002574012.1| hypothetical protein Athe_2164 [Caldicellulosiruptor bescii DSM 6725] gi|222456977|gb|ACM61239.1| protein of unknown function DUF1078 domain protein [Caldicellulosiruptor bescii DSM 6725] Length = 488 Score = 96.9 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 65/155 (41%), Gaps = 15/155 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S ++A A + R+ + DN++N +TVGF++ +V F+ V ++ Sbjct: 1 MMRSMFSSISALRAHQTRMDVIGDNIANVNTVGFKSSRVTFASVFASVLKSASAPDTASG 60 Query: 49 --KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGR 105 ++ Q V+ ++ GS T D A+EGD +F + + TR G Sbjct: 61 RGGSNPMQIGLGVSVASVDMNMTRGSLQRTDNPTDLAIEGDGFFVVGGDGKAPRFTRAGN 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF 140 F + G+LV+A+G + M + Sbjct: 121 FSLDKMGNLVTATGLNVLGWMYDPVNNQIDTTKSP 155 Score = 88.0 bits (216), Expect = 9e-16, Method: Composition-based stats. Identities = 21/210 (10%), Positives = 56/210 (26%), Gaps = 6/210 (2%) Query: 36 TIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP 95 + F + + ++ + +A + + + Sbjct: 276 RGTITFGQAGKVLDDENTPDVEGIAITGGRFINTQNGTFTINFKNNVVNPVTLKVNSSQF 335 Query: 96 RGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQK-GKV 154 T F S + + + G S ++ Sbjct: 336 DVNDATNIAFFLKNITQFGNMESSIRVAQMTGYSAGSLQGFNVDASGKITGVYSNGLNQL 395 Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYE 209 I + + + G R ++ + E + T+ +G LE SN + E Sbjct: 396 IGQIAIATFANPAGLQRIGDNLYINTVNSGDPEIGTPGSGSRGTISQGTLEMSNVDLAKE 455 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 MI + + + +I +++ + + + Sbjct: 456 FTDMIVTQRGYQANARVITASDELLQDLVN 485 >gi|125972995|ref|YP_001036905.1| protein of unknown function DUF1078-like protein [Clostridium thermocellum ATCC 27405] gi|256004792|ref|ZP_05429767.1| protein of unknown function DUF1078 domain protein [Clostridium thermocellum DSM 2360] gi|281417206|ref|ZP_06248226.1| fagellar hook-basal body protein [Clostridium thermocellum JW20] gi|125713220|gb|ABN51712.1| protein of unknown function DUF1078-like protein [Clostridium thermocellum ATCC 27405] gi|255991242|gb|EEU01349.1| protein of unknown function DUF1078 domain protein [Clostridium thermocellum DSM 2360] gi|281408608|gb|EFB38866.1| fagellar hook-basal body protein [Clostridium thermocellum JW20] gi|316940769|gb|ADU74803.1| flagellar hook-basal body protein [Clostridium thermocellum DSM 1313] Length = 440 Score = 96.9 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 33/142 (23%), Positives = 54/142 (38%), Gaps = 16/142 (11%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ A + ++ + +N++N +TVGF++ +V F EV Sbjct: 1 MMRSMFSGVSGLQAHQTKMDVIGNNVANVNTVGFKSSRVTFQEVFSQTLKGASSPDPTTG 60 Query: 54 -------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDG 104 Q + GS T D A+EGD +F ++ TR G Sbjct: 61 RGGTNPMQVGLGLGVATIDTLMTRGSVQRTDNPTDLAIEGDGFFIVKGGSSDTFKFTRAG 120 Query: 105 RFKVTDDGSLVSASGKYPVLDM 126 F + G+LV+ SG Sbjct: 121 NFGIDRLGNLVTGSGLNVYGWQ 142 Score = 89.2 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 27/199 (13%), Positives = 57/199 (28%), Gaps = 13/199 (6%) Query: 47 AIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106 + + S + + S T + + + + +R + Sbjct: 246 QVDSGNGVTASGATGTILFDDQGQVIESSAVTPSITIIPDSSVGSQNINVKLDFSRLTMY 305 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 + G + V I I + G+ G + L S D Sbjct: 306 AADSSAKATNVDGYPA---GSLVTFSIGSDGMIMGIYSNGQQQPLGLI----ALASFDNP 358 Query: 167 QGFVRRENSGISPNIPPTPLEDL------SGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G + + P + T+ G LE SN + E +MI + F Sbjct: 359 AGLEKVGENMYIPTSNSGEFKKGVKAGTEGVGTLSPGTLEMSNVDLSKEFTEMIITQRGF 418 Query: 221 NSITTLIDENEKSMLEAIR 239 + + +I +++ + E + Sbjct: 419 QANSRIITTSDEMLQELVN 437 >gi|325295417|ref|YP_004281931.1| fagellar hook-basal body protein [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065865|gb|ADY73872.1| fagellar hook-basal body protein [Desulfurobacterium thermolithotrophum DSM 11699] Length = 568 Score = 96.5 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 65/184 (35%), Gaps = 15/184 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-------D 53 M SF A + LS ++DN++N +TVGF+ F +++ Sbjct: 1 MLQSFYTAFTGLNADKTWLSVISDNIANVNTVGFKKENAVFEDLLARSLTTFKNGAPVNQ 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDG 112 + G+F++T LD AL+G+ +F ++ G TR+G F++ +G Sbjct: 61 EIGGGTFISTTVKDFSQGTFMNTNNPLDLALDGEGFFMVKDETGVTYYTRNGEFRLDANG 120 Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172 L++ G M + N+ + ++ + R Sbjct: 121 DLINMLGMKVQGWMLDEQGNLAGAVGAINIPMDMPPKETTEI-------KFESPSNLDSR 173 Query: 173 ENSG 176 Sbjct: 174 VEDA 177 Score = 81.8 bits (200), Expect = 8e-14, Method: Composition-based stats. Identities = 26/142 (18%), Positives = 48/142 (33%), Gaps = 3/142 (2%) Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 T D D + S Y D S + + K K IA + + Sbjct: 424 TIDISSFWNDLKQVASDFIFYAQQDGNSKGDIMSVAVSEDGTIRATYTNGKVKDIARLAV 483 Query: 161 YSVDMSQGFVRRENSGISPNIPPTP---LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217 + + VR+ N PN+ + V+ G LE SN + E +I Sbjct: 484 ATFKDKEMLVRKGNWLYVPNVQTFTPVIMPGGVISKVRSGMLEMSNVDIASEFINLITAQ 543 Query: 218 QKFNSITTLIDENEKSMLEAIR 239 + + + +I +++ + E + Sbjct: 544 RAYQANARVITTDDQILQETMN 565 >gi|119469950|ref|ZP_01612755.1| flagellar hook protein E [Alteromonadales bacterium TW-7] gi|119446660|gb|EAW27933.1| flagellar hook protein E [Alteromonadales bacterium TW-7] Length = 454 Score = 96.5 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 40/167 (23%), Positives = 64/167 (38%), Gaps = 5/167 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61 SFNI L A ++ L A+N++N +T GF+ + +F++V + + + V + Sbjct: 2 SFNIALTGIAAAQKDLDVTANNIANVNTTGFKESRAEFADVYASSVFSSGRTKNGDGVQT 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESP---RGIILTRDGRFKVTDDGSLVSAS 118 GS T LD A+ G+ +FA+ + TR G FK+ D +V A Sbjct: 62 TMVAQQFHQGSLQFTNNSLDLAITGEGYFAMSQDLGAQDFTYTRAGAFKLDKDNFVVDAK 121 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 G Y + G AT +YS Sbjct: 122 GNYLQGFPVDEATGDTTSVSLSTSSALQIPDSSGSPRATTNVYSSFN 168 Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats. Identities = 14/101 (13%), Positives = 35/101 (34%), Gaps = 6/101 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLED 201 + + + + SQG + ++ ++ + + LE Sbjct: 355 YSNGDSTFLGQVAMVRFSNSQGLQQVGDTAWKKSLTSGEPIAGEPGSGTLGSINSSALEQ 414 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 SN N E+ +I + F + + ++ ++ +AI I Sbjct: 415 SNVNLTNELVDLISAQRNFQANSRALE-VNSTLQQAILQIR 454 >gi|46579854|ref|YP_010662.1| flagellar hook protein FlgE [Desulfovibrio vulgaris str. Hildenborough] gi|120602680|ref|YP_967080.1| hypothetical protein Dvul_1636 [Desulfovibrio vulgaris DP4] gi|46449270|gb|AAS95921.1| flagellar hook protein FlgE [Desulfovibrio vulgaris str. Hildenborough] gi|120562909|gb|ABM28653.1| protein of unknown function DUF1078 domain protein [Desulfovibrio vulgaris DP4] gi|311234145|gb|ADP86999.1| flagellar hook-basal body protein [Desulfovibrio vulgaris RCH1] Length = 564 Score = 96.5 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 34/169 (20%), Positives = 64/169 (37%), Gaps = 5/169 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA---IKNDIDQKISFVA 60 S G++ LA +R++ + +N++N +TVGF+ ++ F + + + Q V+ Sbjct: 6 SMWTGVSGLLAHGERMNVLGNNIANVNTVGFKGSRMDFEDFLNQDTYSAAGVTQVGRGVS 65 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRFKVTDDGSLVSAS 118 G + G+F +T D A++G +F+++ TR G F+ DG LV Sbjct: 66 IGAIFGDYSQGAFQTTNESTDLAIQGRGFFSVKPKGTEDTYYTRAGNFRFDADGYLVDPH 125 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 G + +I G + Q Sbjct: 126 GYVLQGWAIERSQNSLTSSAVTATSTTSKIKGSGVPVDIKLDGFTAEPQ 174 Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 30/206 (14%), Positives = 55/206 (26%), Gaps = 11/206 (5%) Query: 39 VKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98 FS + + +F+ L + T T A+ DA P Sbjct: 362 ANFSGLTDSSVVGSPTAQNFLMELDLGLRSTNATTPWTSTPNAAAIGTDASLL---PGLT 418 Query: 99 ILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158 R + GS + D + + + + + + + Sbjct: 419 SSQRQPSATTSYAGSSSTQF---QKQDGYTFGFLQNITVDRDGIMQGKYSNGVTLDLYQV 475 Query: 159 GLYSVDMSQGFVRRENSGISPNIP-----PTPLEDLSGVTVKRGFLEDSNANSMYEMGQM 213 L Q R + S P P + LE SN + E +M Sbjct: 476 TLVDFTSKQNLRREGGNLFSGTRDSGDPLPGPANSNGLGAISSNSLEQSNVDLAREFVEM 535 Query: 214 IHLTQKFNSITTLIDENEKSMLEAIR 239 I + F S + +I + + + Sbjct: 536 ITTQRGFQSNSKVITTTDTMLEVVVN 561 >gi|218886899|ref|YP_002436220.1| hypothetical protein DvMF_1808 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218757853|gb|ACL08752.1| protein of unknown function DUF1078 domain protein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 501 Score = 96.5 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 54/162 (33%), Gaps = 7/162 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + G L Q + V++N++N +TVGF+ + F +++ + Sbjct: 1 MLRALYSGATGMKTLAQGMQAVSNNLANVNTVGFKQQQALFEDLMSQYAGTGNSASTSIS 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113 Q GS+ S D ++ G +F + TR G F+ G+ Sbjct: 61 QVGLGSRLTDIRTVYGQGSYESGTDITDLSINGKGFFQVSLGGKTHYTRAGNFRFDKGGN 120 Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI 155 LV +G + ++ G G K Sbjct: 121 LVDPNGFVLNGRAITNGVEGATGPISLPPGADGRNVMPAKAT 162 Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 34/97 (35%), Gaps = 5/97 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLED 201 + + + + LY G R + S + ++ + TV LE Sbjct: 400 YSNGQNDDLYHITLYRFTSEDGLRREGMNHFSATLESGAAQEGLPDTQNYGTVAAKSLEQ 459 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 SN + E MI + F + + I + + +A+ Sbjct: 460 SNVSMEREFVNMIIYQRGFQTNSKSIMTADSMIQKAL 496 >gi|46578723|ref|YP_009531.1| flagella basal body rod domain-containing protein [Desulfovibrio vulgaris str. Hildenborough] gi|120603713|ref|YP_968113.1| hypothetical protein Dvul_2674 [Desulfovibrio vulgaris DP4] gi|46448135|gb|AAS94790.1| flagella basal body rod domain protein [Desulfovibrio vulgaris str. Hildenborough] gi|120563942|gb|ABM29686.1| protein of unknown function DUF1078 domain protein [Desulfovibrio vulgaris DP4] gi|311232595|gb|ADP85449.1| flagellar hook-basal body protein [Desulfovibrio vulgaris RCH1] Length = 498 Score = 96.5 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 32/165 (19%), Positives = 63/165 (38%), Gaps = 7/165 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK-------NDID 53 M G + ++ V +N++N +T+GF+ + + +++ + + I Sbjct: 1 MMHGLYTGATGMRTQAEGMNVVGNNLANVNTIGFKQSMMLYQDLMSQTEPTGSAYVSGIS 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113 Q G + + G+ ++ DFA+ G +F + S + TR G F+ DG Sbjct: 61 QVGLGARVGDVRVLRSQGALLAGSDTTDFAISGKGFFQVTSGQDTHYTRAGNFRFNKDGQ 120 Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158 LV +G + + + P G +S K M Sbjct: 121 LVDPNGFNLMGHAITGETEGPLAAVTLVKDADGRLSMPAKATGGM 165 Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 12/83 (14%), Positives = 28/83 (33%), Gaps = 5/83 (6%) Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIH 215 + G + S ++ + + LE SN + EM MI Sbjct: 412 FRFTSEDGLRSEGMNHYSATTESGAAQEGKADTENYGKLMGKSLEQSNVDMAREMVNMIV 471 Query: 216 LTQKFNSITTLIDENEKSMLEAI 238 + F + + ++ + + +A+ Sbjct: 472 TQRGFQTNSKVVTTADTMIQKAL 494 >gi|283956177|ref|ZP_06373662.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni 1336] gi|283792331|gb|EFC31115.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni 1336] Length = 848 Score = 96.5 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 58/183 (31%), Gaps = 14/183 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G++ A + + +N+SN +T GF+ + F + Sbjct: 1 MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATTPTDGRG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106 + Q V+ GS +T D A+ GD +F + LTR G F Sbjct: 61 GQNPLQIGLGVSVSSTTRIHSQGSVQTTDKNTDVAINGDGFFMVSDDGGLTNYLTRSGDF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 K+ G+ V+ +G + Q +T +++ Sbjct: 121 KLDAYGNFVNNAGYVVQGWNINWDDQTIDSSRTPQNIFIDPGMHIPAAKSTEVAIKANLN 180 Query: 167 QGF 169 G Sbjct: 181 SGL 183 Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 17/144 (11%), Positives = 46/144 (31%), Gaps = 5/144 (3%) Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 T + S + +G+ + + + + K +A + + Sbjct: 702 TSGSNDGLVSSNSASTLTGQATDGYTSGNLKPDAIRVDDKGNILGEFTNGKTFAVAKIAM 761 Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIH 215 SV + G + + T +K LE SN + + ++I Sbjct: 762 ASVANNSGLEEIGGNLFKVTANSGNIVVGEAGTGGRGEMKTSALEMSNVDLSRSLTELII 821 Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239 + + + + + I +++ + I+ Sbjct: 822 IQRGYQANSKTISTSDQMLQTLIQ 845 >gi|158423059|ref|YP_001524351.1| putative flagellar basal body rod protein [Azorhizobium caulinodans ORS 571] gi|158329948|dbj|BAF87433.1| putative flagellar basal body rod protein [Azorhizobium caulinodans ORS 571] Length = 257 Score = 96.5 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 43/249 (17%), Positives = 82/249 (32%), Gaps = 25/249 (10%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66 IG + A +++TVADN +N T G R + + + VA+G + Sbjct: 15 IGASGLRAQVVKVATVADNTANARTPGHRKVAAE---------TTSAPAGAGVATGLRHY 65 Query: 67 SKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYPVLD 125 G+ +TG+ D + GD +F + + +LTR G F + + Y ++ Sbjct: 66 ISSAGTASATGSPTDMMVSGDGFFMVSDGKGNTLLTRSGNFAFDAQSGQLKNAAGYALMA 125 Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLY-----------SVDMSQGFVRREN 174 + ++ G + +T + G Sbjct: 126 TPNGGGAPTPVQLTAEQASSLKVGADGTLASTDADGRSQALYRIPLATTANPDGMTPVAG 185 Query: 175 SGISPNIPPTPLEDL----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 P P T++ G+LEDSN + EM ++ F + + Sbjct: 186 DAFQPGSASGPARTFVSGQGPGTIRAGYLEDSNVDMATEMTDLVTSQASFMANFRTVRMG 245 Query: 231 EKSMLEAIR 239 + + + Sbjct: 246 IEMLDVVLN 254 >gi|315657509|ref|ZP_07910391.1| flagellar hook protein FlgE [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315491981|gb|EFU81590.1| flagellar hook protein FlgE [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 484 Score = 96.5 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 31/169 (18%), Positives = 62/169 (36%), Gaps = 14/169 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50 M S G++ + L ++N++N +T GF++ +F + + Sbjct: 1 MLRSLFTGISGLSVHQTMLDVTSNNIANVNTTGFKSASTRFEDTFSQLVRSGAAPRLNER 60 Query: 51 ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRF 106 + Q V + G+ TG LD + GD ++ ++ + TR+G F Sbjct: 61 GGMNPAQVGLGVKLQSITQNFTGGAAQMTGRNLDTMINGDGFYVLRKTNGSSVYTRNGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI 155 + G +V+A G + M I N+ + +G+ Sbjct: 121 GLDAQGQVVAADGSFVQGWMGDKDGTINASGTPGNITLPLTKTVEGRPT 169 Score = 81.5 bits (199), Expect = 9e-14, Method: Composition-based stats. Identities = 18/135 (13%), Positives = 44/135 (32%), Gaps = 10/135 (7%) Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-----EISQKGKVIATMGLYSVDMSQGF 169 ++ G V + ++V G + + +A + + S G Sbjct: 347 LTGFGGVNNFGQKQVDGNMAGYMTGYSVEADGTIRGTFSNGDNRALARIAVASFANPLGL 406 Query: 170 VRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224 + +S + T + G +E SN + E +I + F + + Sbjct: 407 EKAGSSYFVETGNSGQPQIGEAGTGQRGAMTGGAIEMSNVDLAAEFTNLILSQRGFQANS 466 Query: 225 TLIDENEKSMLEAIR 239 +I +++ + E + Sbjct: 467 RVITTSDEILQELVN 481 >gi|332533175|ref|ZP_08409044.1| flagellar hook protein FlgE [Pseudoalteromonas haloplanktis ANT/505] gi|332037457|gb|EGI73911.1| flagellar hook protein FlgE [Pseudoalteromonas haloplanktis ANT/505] Length = 455 Score = 96.5 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 38/185 (20%), Positives = 65/185 (35%), Gaps = 5/185 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61 SFNI L A ++ L A+N++N +T GF+ + +F++V + + + V + Sbjct: 2 SFNIALTGLAAAQKDLDVTANNIANVNTTGFKESRAEFADVYASSVFSSGKTKNGDGVQT 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESP---RGIILTRDGRFKVTDDGSLVSAS 118 GS T LD A+ G+ +FA+ + + TR G FK+ D +V A Sbjct: 62 TMVAQQFHQGSLQFTNNSLDLAITGEGYFAMTDDLSSQDLTYTRAGAFKLNQDNFMVDAK 121 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178 G + + G AT ++ Sbjct: 122 GNFLQAFPVDSSTGDTTSVSLSTTDPIQIPDSSGSPRATENVFLSFNLDATADAPGIAFD 181 Query: 179 PNIPP 183 P Sbjct: 182 PTSSG 186 Score = 65.7 bits (158), Expect = 5e-09, Method: Composition-based stats. Identities = 12/98 (12%), Positives = 32/98 (32%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLED 201 + + + + SQG + ++ +I + + LE Sbjct: 356 YSNGDSTFLGQVAMVRFPNSQGLSQVGDTSWKQSIDSGEPVAGEAGSGTFGGINSSALEQ 415 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN N E+ +I + + + + ++ N ++ Sbjct: 416 SNTNLTNELVDLITAQRNYQANSRALEVNSTIQQSILQ 453 >gi|292669794|ref|ZP_06603220.1| flagellar hook protein FlgE [Selenomonas noxia ATCC 43541] gi|292648591|gb|EFF66563.1| flagellar hook protein FlgE [Selenomonas noxia ATCC 43541] Length = 680 Score = 96.5 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 30/146 (20%), Positives = 56/146 (38%), Gaps = 13/146 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ + R+ + +N++N +T GF+ +V F++++ + Sbjct: 1 MMRSMFSGVSGLKGHQTRMDVIGNNIANVNTTGFKASRVTFADMISQNLSGAASPNGNIG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFAL-EGDAWFALESPRGIILTRDGRFK 107 Q ++ L GS TG D A+ GD F ++ TR+G F Sbjct: 61 GVNPKQVGLGMSVASTDLIYTNGSVQQTGKNTDIAISRGDGLFVVKRGEQQFYTRNGAFS 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQI 133 +G+L S V + + Sbjct: 121 FDAEGNLTIPSTGLYVQGYMANNGVL 146 Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 12/88 (13%), Positives = 28/88 (31%), Gaps = 4/88 (4%) Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTV----KRGFLEDSNANSMYEMG 211 A + + + G + + + + LE SN + + Sbjct: 590 AQIAMAQFNNPSGLTKMGGNLYQESNNSGTRTISGASDIGTELTTSALEMSNVDIADQFS 649 Query: 212 QMIHLTQKFNSITTLIDENEKSMLEAIR 239 MI + F S + +I +++ + I Sbjct: 650 DMIITQRGFQSNSKIITVSDEMLETLIN 677 >gi|86150552|ref|ZP_01068776.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni CF93-6] gi|85839004|gb|EAQ56269.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni CF93-6] Length = 852 Score = 96.5 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 59/183 (32%), Gaps = 14/183 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G++ A + + +N+SN +T GF+ + F + Sbjct: 1 MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATAPTDGRG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106 ++ Q V+ GS +T D A+ GD +F + LTR G F Sbjct: 61 GSNPLQIGLGVSVSSTTRIHSQGSVQTTDKNTDVAINGDGFFMVSDDGGLTRYLTRSGDF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 K+ G+ V+ +G + Q +T +++ Sbjct: 121 KLDAYGNFVNNAGFVVQGWNINWDTQSIDSSRTPQNIFIDPGMHIPAAKSTEVAIKANLN 180 Query: 167 QGF 169 G Sbjct: 181 SGL 183 Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 17/144 (11%), Positives = 46/144 (31%), Gaps = 5/144 (3%) Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 T + S + +G+ + + + + K +A + + Sbjct: 706 TSGSNDGLVSSNSASTLTGQATDGYTSGNLKPDAIRVDDKGNILGEFTNGKTFAVAKIAM 765 Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIH 215 SV + G + + T +K LE SN + + ++I Sbjct: 766 ASVANNSGLEEIGGNLFKVTANSGAIVVGEAGTGGRGEMKTSALEMSNVDLSRSLTELII 825 Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239 + + + + + I +++ + I+ Sbjct: 826 IQRGYQANSKTISTSDQMLQTLIQ 849 >gi|284926913|gb|ADC29265.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni IA3902] Length = 852 Score = 96.5 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 59/183 (32%), Gaps = 14/183 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G++ A + + +N+SN +T GF+ + F + Sbjct: 1 MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATAPTDGRG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106 ++ Q V+ GS +T D A+ GD +F + LTR G F Sbjct: 61 GSNPLQIGLGVSVSSTTRIHSQGSVQTTDKNTDVAINGDGFFMVSDDGGLTRYLTRSGDF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 K+ G+ V+ +G + Q +T +++ Sbjct: 121 KLDAYGNFVNNAGFVVQGWNINWDTQSIDSSRTPQNIFIDPGMHIPAAKSTEVAIKANLN 180 Query: 167 QGF 169 G Sbjct: 181 SGL 183 Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 17/144 (11%), Positives = 46/144 (31%), Gaps = 5/144 (3%) Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 T + S + +G+ + + + + K +A + + Sbjct: 706 TSGSNDGLVSSNSASTLTGQATDGYTSGNLKPDAIRVDDKGNILGEFTNGKTFAVAKIAM 765 Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIH 215 SV + G + + T +K LE SN + + ++I Sbjct: 766 ASVANNSGLEEIGGNLFKVTANSGAIVVGEAGTGGRGEMKTSALEMSNVDLSRSLTELII 825 Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239 + + + + + I +++ + I+ Sbjct: 826 IQRGYQANSKTISTSDQMLQTLIQ 849 >gi|253998488|ref|YP_003050551.1| flagellar hook protein FlgE [Methylovorus sp. SIP3-4] gi|253985167|gb|ACT50024.1| flagellar basal body FlaE domain protein [Methylovorus sp. SIP3-4] Length = 402 Score = 96.5 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 32/123 (26%), Positives = 60/123 (48%), Gaps = 2/123 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ--KISFVAS 61 SF GL+ A + L + +N++N +TVGF+ + +F++V N V Sbjct: 2 SFQQGLSGLNAASKSLDVIGNNVANANTVGFKQSRAEFADVYANALNGSGTGSAGIGVKV 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 G+ +T LD A+ G+ +F L + I +R+G+F++ G +V++SG++ Sbjct: 62 ADIQRQFTQGNITNTENPLDIAINGNGFFRLSNSGAITYSRNGQFQLDKAGYIVTSSGEH 121 Query: 122 PVL 124 Sbjct: 122 LTG 124 Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 31/98 (31%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLED 201 + + K +A + L G N+ + T ++ ED Sbjct: 303 YTNGQAKALAQVVLAKFANPNGLAALGNNQFAETSDAGVPVIGKAGTGGLGVLQSSATED 362 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ MI + + + I ++ + + Sbjct: 363 SNVDLTAELVNMITAQRYYQANAQTIKTQDQVLQTLVN 400 >gi|229826311|ref|ZP_04452380.1| hypothetical protein GCWU000182_01683 [Abiotrophia defectiva ATCC 49176] gi|229789181|gb|EEP25295.1| hypothetical protein GCWU000182_01683 [Abiotrophia defectiva ATCC 49176] Length = 495 Score = 96.5 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 31/147 (21%), Positives = 59/147 (40%), Gaps = 15/147 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK----------- 49 M S G+A + ++ + +N++N +TVGF++ FS+V Sbjct: 1 MMRSLFSGVAGLKVHQTKMDVIGNNIANVNTVGFKSSSTVFSDVFYQTTQTASGPNKESN 60 Query: 50 -NDIDQKISFVASGKEY---LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGR 105 ++ K + + + G +T LD + GD++F ++ T++G Sbjct: 61 VGGVNPKQIGLGANVSSISKNITDPGGSQTTNNALDCMINGDSFFVTKNGGRTYFTKNGA 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQ 132 FKV DG+LV++ G Sbjct: 121 FKVDTDGTLVNSEGAKVQGWQVDPDDP 147 Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 31/93 (33%), Gaps = 6/93 (6%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSG------VTVKRGFLEDSNANS 206 K++ + + S G NS + + + + G LE SN + Sbjct: 400 KLLGQIAVASFKNPSGLEAVGNSNFVETMNSGKFDGVGKDITTDGGKISTGMLEMSNVDL 459 Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + MI + F + + I + + E I Sbjct: 460 AAQFTDMITTQRGFQANSRTITTTDSILEELIN 492 >gi|291334312|gb|ADD93973.1| flagellar hook protein [uncultured marine bacterium MedDCM-OCT-S09-C247] Length = 376 Score = 96.1 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 35/194 (18%), Positives = 72/194 (37%), Gaps = 3/194 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SF L + ++T ++N++N + GF+ + +F ++ G+ + + A+ Sbjct: 2 SFYTALTGLKGAQTDIATTSNNIANVGSSGFKKSRAEFGDIFGSTPLQTNTVGAGTATKS 61 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALE---SPRGIILTRDGRFKVTDDGSLVSASGK 120 G+ + LD A+ G +F L+ + + TR+G F V D G +V ++G+ Sbjct: 62 IKQQFSQGNISQSTNTLDMAVSGQGFFTLKGGGNAGQTVFTRNGSFSVNDAGFIVDSNGQ 121 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 + + + K V + S V V++ + Sbjct: 122 FLLGYPVDNGGAVADKTLEGAVQLQLAASFGDPVATKKINAGVNLPSDAPVVAANVAFDA 181 Query: 181 IPPTPLEDLSGVTV 194 S VT+ Sbjct: 182 NDAKTYSASSSVTI 195 >gi|309388826|gb|ADO76706.1| flagellar hook-basal body protein [Halanaerobium praevalens DSM 2228] Length = 548 Score = 96.1 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 35/148 (23%), Positives = 57/148 (38%), Gaps = 12/148 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-------- 52 M S G++ + +Q + +N+SN +TVGF++ +V F E++ Sbjct: 1 MLRSMYAGVSGLNSHQQMMDVTGNNISNVNTVGFKSSRVTFKEMLSQTIRGASAPQENRA 60 Query: 53 ----DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 Q V G G+ STG D A++GD +F L + +R G F Sbjct: 61 GTNPQQVGLGVGVGSIDSDMSSGNLQSTGKTSDVAIQGDGFFVLRDGSTEVYSRAGNFNF 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQK 136 + G L S+S V + Sbjct: 121 DEQGRLYSSSTGMLVQGWTANENGEYNN 148 Score = 79.9 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 25/154 (16%), Positives = 48/154 (31%), Gaps = 8/154 (5%) Query: 90 FALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEIS 149 L+ G + DG + S + + +I G Sbjct: 396 VELDFSAMTQFADGGSLETNSDGMTANFSSVNGYEAGSLESFSFTETGDIVGSFSNGLTQ 455 Query: 150 QKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP----LEDLSGVTVKRGFLEDSNAN 205 +GK+ + + G R+E + + ++ LE SNAN Sbjct: 456 IQGKI----AMANFANPAGLSRQEGVFEATSNSGEAGIGEPAQGGFGSLAPSTLEMSNAN 511 Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E MI + F + + LI +++ + E + Sbjct: 512 LSQEFTNMITAQRGFQANSKLITTSDEMLQELVN 545 >gi|291280053|ref|YP_003496888.1| flagellar basal-body rod protein [Deferribacter desulfuricans SSM1] gi|290754755|dbj|BAI81132.1| flagellar basal-body rod protein [Deferribacter desulfuricans SSM1] Length = 205 Score = 96.1 bits (237), Expect = 4e-18, Method: Composition-based stats. Identities = 52/243 (21%), Positives = 86/243 (35%), Gaps = 39/243 (16%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M L+A A R+ A+N++N +T GF+ + + + + V Sbjct: 1 MIKGLYNSLSALNAAITRVDNSANNIANINTPGFKRV----------VSYNSALSKNGVN 50 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 G I TG LD A+ G +F L + + G + TR G F + + G++VS G Sbjct: 51 VYSIKDLDTQGYLIYTGRNLDLAINGKGFFKLTNNQGGEVFTRFGHFSMDEKGNIVSPRG 110 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 + I++ I+ E +G + S G ENS Sbjct: 111 EILFSTGREGKIEVSPDGSIYIDKE------------PLGKIELFNSSGNKVPENSY--- 155 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + G+LE SN + E+ MI F + ++ + I Sbjct: 156 -------------EILPGYLEASNVDLAKEIVDMIVTKNYFEANLKTTKVIDEMLGNIID 202 Query: 240 NIA 242 N A Sbjct: 203 NFA 205 >gi|284925346|gb|ADC27698.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni IA3902] Length = 544 Score = 96.1 bits (237), Expect = 4e-18, Method: Composition-based stats. Identities = 42/216 (19%), Positives = 79/216 (36%), Gaps = 9/216 (4%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI----KNDIDQKIS 57 SF G++ + + A+N++N +T GF+ +F ++ + Q Sbjct: 1 MNSFYNGISGVKSNSFGIDITANNIANVNTTGFKYSDAQFKDIFYTTITTQSTNPAQGGY 60 Query: 58 FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVS 116 + + E GS +++ E D AL+G +F + G TR+G F+ +G LV Sbjct: 61 GSGAASSQVVFEQGSPVASDGEFDVALQGKGFFGVLGADGNAYYTRNGSFRRDANGYLVD 120 Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + G + + M I D + + + + S G + + Sbjct: 121 SYGNFVLGTMNPAFTGINYSDRVAGLMGDYLNTGTPVNNGFTVNSNNSFSIGTTASQGAI 180 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQ 212 P P + V G L N N+ E+ + Sbjct: 181 KVPVNMYLPPQVTQNVK-WSGSL---NTNTTTEVVK 212 Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 44/124 (35%), Gaps = 7/124 (5%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 D + + K ++ + LY+ QG V ++ + Sbjct: 418 QQDGVAEGFFEQYNISDDGSIVAQFSNGKNAIVGKLALYNFINEQGLVAMGDNIFAATAN 477 Query: 183 P-------TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 + ++ K GFLE SN + E+ +I + F++ + I +++ + Sbjct: 478 SGDASFIMKDGQVVNTAKFKGGFLEQSNVDLSAELSNLIVTQKAFDASSKSITTSDQMIQ 537 Query: 236 EAIR 239 +AI Sbjct: 538 KAIN 541 >gi|313896037|ref|ZP_07829591.1| putative flagellar hook protein FlgE [Selenomonas sp. oral taxon 137 str. F0430] gi|312975462|gb|EFR40923.1| putative flagellar hook protein FlgE [Selenomonas sp. oral taxon 137 str. F0430] Length = 676 Score = 96.1 bits (237), Expect = 4e-18, Method: Composition-based stats. Identities = 33/148 (22%), Positives = 56/148 (37%), Gaps = 13/148 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ + R+ + +N++N +T GF+ +V F++++ + Sbjct: 1 MMRSMFSGVSGLKGHQTRMDVIGNNIANVNTTGFKASRVTFADMISQNLSGASAPQGTIG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFAL-EGDAWFALESPRGIILTRDGRFK 107 Q +A L GS STG D A+ GD F + TR+G F+ Sbjct: 61 GVNPKQIGLGMAVASTDLLYTNGSVQSTGKNTDIAISRGDGLFVVSRGNEKYYTRNGAFE 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQ 135 G+L S V + I Sbjct: 121 FDAQGNLTIPSTGLYVQGYMANNGVISN 148 Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 12/88 (13%), Positives = 28/88 (31%), Gaps = 4/88 (4%) Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKR----GFLEDSNANSMYEMG 211 A + + + G + + + + LE SN + + Sbjct: 586 AQIAMAQFNNPSGLTKMGGNLYQESNNSGTRTISGAADIGSELTTSALEMSNVDIADQFS 645 Query: 212 QMIHLTQKFNSITTLIDENEKSMLEAIR 239 MI + F S + +I +++ + I Sbjct: 646 DMIITQRGFQSNSKIITVSDEMLETLIN 673 >gi|315123658|ref|YP_004065662.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315017380|gb|ADT65473.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 544 Score = 96.1 bits (237), Expect = 4e-18, Method: Composition-based stats. Identities = 42/216 (19%), Positives = 79/216 (36%), Gaps = 9/216 (4%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI----KNDIDQKIS 57 SF G++ + + A+N++N +T GF+ +F ++ + Q Sbjct: 1 MNSFYNGISGVKSNSFGIDITANNIANVNTTGFKYSDAQFKDIFYTTITTQSTNPAQGGY 60 Query: 58 FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLVS 116 + + E GS +++ E D AL+G +F + G TR+G F+ +G LV Sbjct: 61 GSGAASSQVVFEQGSPVASDGEFDVALQGKGFFGVLGADGNAYYTRNGSFRRDANGYLVD 120 Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + G + + M I D + + + + S G + + Sbjct: 121 SYGNFVLGTMNPAFTGINYSDRVAGLMGDYLNTGTPVNNGFTVNSNNSFSIGTTASQGAI 180 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQ 212 P P + V G L N N+ E+ + Sbjct: 181 KVPVNMYLPPQVTQNVK-WSGSL---NTNTTTEVVK 212 Score = 72.2 bits (175), Expect = 6e-11, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 7/124 (5%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 D + + K ++ + LY+ QG ++ + Sbjct: 418 QQDGVAEGFFEQYNISDDGSIVAQFSNGKNAIVGKLALYNFINEQGLAAMGDNIFAATAN 477 Query: 183 P-------TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 + ++ K GFLE SN + E+ +I + F++ + I +++ + Sbjct: 478 SGDASFIMKDGQVVNTAKFKGGFLEQSNVDLSAELSNLIVTQKAFDASSKSITTSDQMIQ 537 Query: 236 EAIR 239 +AI Sbjct: 538 KAIN 541 >gi|205355740|ref|ZP_03222510.1| flagellar hook subunit protein [Campylobacter jejuni subsp. jejuni CG8421] gi|205346517|gb|EDZ33150.1| flagellar hook subunit protein [Campylobacter jejuni subsp. jejuni CG8421] Length = 852 Score = 96.1 bits (237), Expect = 4e-18, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 59/183 (32%), Gaps = 14/183 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G++ A + + +N+SN +T GF+ + F + Sbjct: 1 MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATAPTDGRG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106 ++ Q V+ GS +T D A+ GD +F + LTR G F Sbjct: 61 GSNPLQIGLGVSVSSTTRIHSQGSVQTTDKNTDVAINGDGFFMVSDDGGLTRYLTRSGDF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 K+ G+ V+ +G + Q +T +++ Sbjct: 121 KLDAYGNFVNNAGFVVQGWNINWDTQSIDSSRTPQNIFIDPGMHIPAAKSTEVAIKANLN 180 Query: 167 QGF 169 G Sbjct: 181 SGL 183 Score = 74.1 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 18/144 (12%), Positives = 46/144 (31%), Gaps = 5/144 (3%) Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 T + S + +G+ + + + + K +A M + Sbjct: 706 TSGSNDGLVSSNSASTLTGQATDGYTSGNLKPDAIRVDDKGNILGEFTNGKTFAVAKMAM 765 Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIH 215 SV + G + + T +K LE SN + + ++I Sbjct: 766 ASVANNSGLEEIGGNLFKVTANSGAIVVGEAGTGGRGEMKTSALEMSNVDLSRSLTELII 825 Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239 + + + + + I +++ + I+ Sbjct: 826 IQRGYQANSKTISTSDQMLQTLIQ 849 >gi|152975165|ref|YP_001374682.1| flagellar hook protein FlgE [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152023917|gb|ABS21687.1| protein of unknown function DUF1078 domain protein [Bacillus cytotoxicus NVH 391-98] Length = 467 Score = 96.1 bits (237), Expect = 4e-18, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 54/135 (40%), Gaps = 13/135 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49 M S ++ A++ LS ++N++N TVG++ K F +++ Sbjct: 1 MIKSLYTSISGMSAMQNALSVTSNNIANAQTVGYKKQKAVFDDLLYNNTVGAKGDDTKAG 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107 + + V GS TG A+EG+ +F G+ TR G F Sbjct: 61 TNPKSIGNGVKFSGTSTDYNGGSITMTGINGQVAIEGNGFFVVGDSQGNGVQYTRKGTFG 120 Query: 108 VTDDGSLVSASGKYP 122 +++ +V+ G+Y Sbjct: 121 KSENNYIVNGEGQYV 135 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 14/128 (10%), Positives = 38/128 (29%), Gaps = 5/128 (3%) Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 + ++ + + + K + ++ + + + G ++ N P Sbjct: 340 DHKDVNGRAAAVAMDYKISDNGYVMVTYSDNSTRAVSQLAVATFKNQDGLMKVGNGNYVP 399 Query: 180 NIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 E + G E SN + E ++ + F +I ++ + Sbjct: 400 TASAGDPFIGVAEQNGAGKIIGGAQEGSNVDLSVEFVDLMLYQRGFQGNAKVIKVSDDVL 459 Query: 235 LEAIRNIA 242 E + I Sbjct: 460 NEVVNLIR 467 >gi|315057484|gb|ADT71813.1| Flagellar hook protein flgE [Campylobacter jejuni subsp. jejuni S3] gi|315926889|gb|EFV06255.1| flagella basal body rod family protein [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315926904|gb|EFV06270.1| flagella basal body rod family protein [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 544 Score = 96.1 bits (237), Expect = 4e-18, Method: Composition-based stats. Identities = 42/216 (19%), Positives = 79/216 (36%), Gaps = 9/216 (4%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI----KNDIDQKIS 57 SF G++ + + A+N++N +T GF+ +F ++ + Q Sbjct: 1 MNSFYNGISGVKSNSFGIDITANNIANVNTTGFKYSDAQFKDIFYTTITTQSTNPAQGGY 60 Query: 58 FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLVS 116 + + E GS +++ E D AL+G +F + G TR+G F+ +G LV Sbjct: 61 GSGAASSQVVFEQGSPVASDGEFDVALQGKGFFGVLGADGNAYYTRNGSFRRDANGYLVD 120 Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + G + + M I D + + + + S G + + Sbjct: 121 SYGNFVLGTMNPAFTGINYSDRVAGLMGDYLNTGTPVNNGFTVNSNNSFSIGTTASQGAI 180 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQ 212 P P + V G L N N+ E+ + Sbjct: 181 KVPVNMYLPPQVTQNVK-WSGSL---NTNTTTEVVK 212 Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 44/124 (35%), Gaps = 7/124 (5%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 D + + K ++ + LY+ QG V ++ + Sbjct: 418 QQDGVAEGFFEQYNISDDGSIVAQFSNGKNAIVGKLALYNFINEQGLVAMGDNIFAATAN 477 Query: 183 P-------TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 + ++ K GFLE SN + E+ +I + F++ + I +++ + Sbjct: 478 SGDASFIMKDGQVVNTAKFKGGFLEQSNVDLSAELSNLIVTQKAFDASSKSITTSDQMIQ 537 Query: 236 EAIR 239 +AI Sbjct: 538 KAIN 541 >gi|114330361|ref|YP_746583.1| flagellar hook protein FlgE [Nitrosomonas eutropha C91] gi|114307375|gb|ABI58618.1| flagellar basal body FlaE domain protein [Nitrosomonas eutropha C91] Length = 419 Score = 96.1 bits (237), Expect = 4e-18, Method: Composition-based stats. Identities = 36/153 (23%), Positives = 62/153 (40%), Gaps = 1/153 (0%) Query: 8 GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-DQKISFVASGKEYL 66 GL+ A +L +N++N +TVGF+ + +FS+V +Q Sbjct: 6 GLSGLKAASAKLDVTGNNIANANTVGFKQSQAQFSDVFANSLGGGKNQIGIGTQVAAIAQ 65 Query: 67 SKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDM 126 G+ S+ LD A+ G+ +F + I TR+G+F + DG LV+A+ Sbjct: 66 EFAQGNVTSSDNPLDVAITGNGFFRTNNNGTISYTRNGQFHLDKDGFLVNANSYNVTGFA 125 Query: 127 ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG 159 A QI + +++ K G Sbjct: 126 ADASGQIIPNIPVNLRLPTSDLTPKPTANFATG 158 Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 12/125 (9%), Positives = 32/125 (25%), Gaps = 5/125 (4%) Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 D + + + + + L G N+ + Sbjct: 294 NMMNQDGFTSGRLAGYSISDNGEIRGSYTNGVTRTLGQLALAGFSNPNGLKPMGNNQWAE 353 Query: 180 NIPPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 E +++ +E+SN + E+ +I + + + I + M Sbjct: 354 TAESGLPLIGTPETGVLGSLQSSAVEESNVDLTSELVSLIMTQRVYQANAKTIQTQDAVM 413 Query: 235 LEAIR 239 + Sbjct: 414 QSIMN 418 >gi|196039147|ref|ZP_03106454.1| putative flagellar basal-body rod protein [Bacillus cereus NVH0597-99] gi|196030292|gb|EDX68892.1| putative flagellar basal-body rod protein [Bacillus cereus NVH0597-99] Length = 249 Score = 96.1 bits (237), Expect = 4e-18, Method: Composition-based stats. Identities = 42/246 (17%), Positives = 84/246 (34%), Gaps = 15/246 (6%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DIDQKISFVASG 62 + QR++ ++N++N T GF+ + + +I V Sbjct: 2 GMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIGSVDYAVVPA 61 Query: 63 KEYLSKEVGSFISTGTELDFALEGDA-----WFALESPRGIILTRDGRFKVTDDGSLVSA 117 +++ G+ T ++ DF L+ +F LTRDG F + D L + Sbjct: 62 ATHVNLVQGNIQMTNSDTDFLLDDGTAGTASFFVTSKNNETFLTRDGSFTLNSDRYLQTT 121 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM--SQGFVRRENS 175 SG + + + + IA + +V + ++REN Sbjct: 122 SGAFVMGENNERIRIPEGAKVAVQADGTLYDAVTQNNIARLQTKTVGAEVNNRLIQRENK 181 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 + TVK LE+SN + EM ++ + ++ ++ +K Sbjct: 182 SFTLAEGNIADLPNGVGTVKNYMLENSNVDMTKEMADLMTDQRMISASQRVMTSFDKIYE 241 Query: 236 EAIRNI 241 + I Sbjct: 242 KEANEI 247 >gi|88597739|ref|ZP_01100972.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni 84-25] gi|88190043|gb|EAQ94019.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni 84-25] Length = 865 Score = 96.1 bits (237), Expect = 4e-18, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 59/183 (32%), Gaps = 14/183 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G++ A + + +N+SN +T GF+ + F + Sbjct: 1 MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATAPTDGRG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106 ++ Q V+ GS +T D A+ GD +F + LTR G F Sbjct: 61 GSNPLQIGLGVSVSSTTRIHSQGSVQTTDKNTDVAINGDGFFMVSDDGGLTNYLTRSGDF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 K+ G+ V+ +G + Q +T +++ Sbjct: 121 KLDAYGNFVNNAGFVVQGWNINWDDQTIDSSRTPQNIFIDPGMHIPAAKSTEVAIKANLN 180 Query: 167 QGF 169 G Sbjct: 181 SGL 183 Score = 73.0 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 17/144 (11%), Positives = 46/144 (31%), Gaps = 5/144 (3%) Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 T + S + +G+ + + + + K +A + + Sbjct: 719 TSGSNDGLVSSNSASTLTGQATDGYTSGNLKPDAIRVDDKGNILGEFTNGKTFAVAKIAM 778 Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIH 215 SV + G + + T +K LE SN + + ++I Sbjct: 779 ASVANNSGLEEIGGNLFKVTANSGNIVVGEAGTGGRGEMKTSALEMSNVDLSRSLTELII 838 Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239 + + + + + I +++ + I+ Sbjct: 839 IQRGYQANSKTISTSDQMLQTLIQ 862 >gi|237753142|ref|ZP_04583622.1| flagellar hook protein FlgE [Helicobacter winghamensis ATCC BAA-430] gi|229375409|gb|EEO25500.1| flagellar hook protein FlgE [Helicobacter winghamensis ATCC BAA-430] Length = 758 Score = 95.7 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 34/141 (24%), Positives = 53/141 (37%), Gaps = 14/141 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ A + L ++N++N +T GF+ + FS +V K Sbjct: 1 MLRSLWSGVSGMQAHQIALDVESNNIANVNTTGFKYSRADFSTMVSQTKRSATIPYAGYG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106 E GS +T + D ALEG F + + + TRDG F Sbjct: 61 GVNDFSVGLGTGIETTTKIFEQGSLQNTDRKGDLALEGKGMFVVSNNGGYSNMYTRDGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMA 127 G+LV+ SG + Sbjct: 121 MFDAVGNLVNTSGFIVQGWVR 141 Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 14/127 (11%), Positives = 42/127 (33%), Gaps = 5/127 (3%) Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + + D + + + + + +A + + + +G ++ Sbjct: 628 SQAQNVNGDGYASGVLKEYYFDATGTLIGSFDNGQNLALAQVAIATFANYEGLQESGSNL 687 Query: 177 ISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 + + + T V LE SNA+ + Q+I + + F + + I + Sbjct: 688 FAESANSGRATIGTAGTGGRASVAASKLEMSNADLSRGLTQLIVVQRGFQANSKSITTAD 747 Query: 232 KSMLEAI 238 + + + Sbjct: 748 QVLNTLL 754 >gi|86154000|ref|ZP_01072202.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni HB93-13] gi|85842538|gb|EAQ59751.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni HB93-13] Length = 845 Score = 95.7 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 59/183 (32%), Gaps = 14/183 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G++ A + + +N+SN +T GF+ + F + Sbjct: 1 MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATAPTDGRG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106 ++ Q V+ GS +T D A+ GD +F + LTR G F Sbjct: 61 GSNPLQIGLGVSVSSTTRIHSQGSVQTTDKNTDVAINGDGFFMVSDDGGLTNYLTRSGDF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 K+ G+ V+ +G + Q +T +++ Sbjct: 121 KLDAYGNFVNNAGFVVQGWNINWDDQTIDSSRSPQNIFIDPGMHIPAAKSTEVAIKANLN 180 Query: 167 QGF 169 G Sbjct: 181 SGL 183 Score = 73.0 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 17/144 (11%), Positives = 46/144 (31%), Gaps = 5/144 (3%) Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 T + S + +G+ + + + + K +A + + Sbjct: 699 TSGSNDGLVSSNSASTLTGQATDGYTSGNLKPDAIRVDDKGNILGEFTNGKTFAVAKIAM 758 Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIH 215 SV + G + + T +K LE SN + + ++I Sbjct: 759 ASVANNSGLEEIGGNLFKVTANSGNIVVGEAGTGGRGEMKTSALEMSNVDLSRSLTELII 818 Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239 + + + + + I +++ + I+ Sbjct: 819 IQRGYQANSKTISTSDQMLQTLIQ 842 >gi|304438415|ref|ZP_07398355.1| flagellar hook protein FlgE [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304368498|gb|EFM22183.1| flagellar hook protein FlgE [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 678 Score = 95.7 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 30/147 (20%), Positives = 55/147 (37%), Gaps = 13/147 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S ++ + R+ V +N++N +T GF+ +V F++++ + Sbjct: 1 MIRSMFSAVSGLKGHQTRMDVVGNNIANVNTTGFKASRVTFADMISQNLSGASSPTGTIG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFAL-EGDAWFALESPRGIILTRDGRFK 107 Q ++ L GS TG D A+ GD F + + TR+G F Sbjct: 61 GVNPKQIGLGMSVASTDLLYTNGSVQQTGKNTDVAISRGDGLFVVSKGQQKFYTRNGAFS 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIP 134 +G+L S V + + Sbjct: 121 FDAEGNLTIPSTGLYVQGYMANNGVLN 147 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 12/88 (13%), Positives = 28/88 (31%), Gaps = 4/88 (4%) Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTV----KRGFLEDSNANSMYEMG 211 A + + + G + + + + LE SN + + Sbjct: 588 AQIAMAQFNNPSGLTKMGGNLYQESNNSGTRTISGASDIGTELTTSALEMSNVDLADQFS 647 Query: 212 QMIHLTQKFNSITTLIDENEKSMLEAIR 239 MI + F S + +I +++ + I Sbjct: 648 DMIITQRGFQSNSKMITVSDEMLETLIN 675 >gi|218563315|ref|YP_002345095.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|112361022|emb|CAL35823.1| flagellar hook subunit protein [Campylobacter jejuni subsp. jejuni NCTC 11168] Length = 865 Score = 95.7 bits (236), Expect = 5e-18, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 59/183 (32%), Gaps = 14/183 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G++ A + + +N+SN +T GF+ + F + Sbjct: 1 MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATAPTDGRG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106 ++ Q V+ GS +T D A+ GD +F + LTR G F Sbjct: 61 GSNPLQIGLGVSVSSTTRIHSQGSVQTTDKNTDVAINGDGFFMVSDDGGLTNYLTRSGDF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 K+ G+ V+ +G + Q +T +++ Sbjct: 121 KLDAYGNFVNNAGFVVQGWNINWDDQTIDSSRTPQNIFIDPGMHIPAAKSTEVAIKANLN 180 Query: 167 QGF 169 G Sbjct: 181 SGL 183 Score = 73.0 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 17/144 (11%), Positives = 46/144 (31%), Gaps = 5/144 (3%) Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 T + S + +G+ + + + + K +A + + Sbjct: 719 TSGSNDGLVSSNSASTLTGQATDGYTSGNLKPDAIRVDDKGNILGEFTNGKTFAVAKIAM 778 Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIH 215 SV + G + + T +K LE SN + + ++I Sbjct: 779 ASVANNSGLEEIGGNLFKVTANSGNIVVGEAGTGGRGEMKTSALEMSNVDLSRSLTELII 838 Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239 + + + + + I +++ + I+ Sbjct: 839 IQRGYQANSKTISTSDQMLQTLIQ 862 >gi|148926818|ref|ZP_01810497.1| flagellar hook subunit protein [Campylobacter jejuni subsp. jejuni CG8486] gi|145844543|gb|EDK21650.1| flagellar hook subunit protein [Campylobacter jejuni subsp. jejuni CG8486] Length = 865 Score = 95.7 bits (236), Expect = 5e-18, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 59/183 (32%), Gaps = 14/183 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G++ A + + +N+SN +T GF+ + F + Sbjct: 1 MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATAPTDGRG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106 ++ Q V+ GS +T D A+ GD +F + LTR G F Sbjct: 61 GSNPLQIGLGVSVSSTTRIHSQGSVQTTDKNTDVAINGDGFFMVSDDGGLTNYLTRSGDF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 K+ G+ V+ +G + Q +T +++ Sbjct: 121 KLDAYGNFVNNAGFVVQGWNINWDDQTIDSSRTPQNIFIDPGMHIPAAKSTEVAIKANLN 180 Query: 167 QGF 169 G Sbjct: 181 SGL 183 Score = 73.0 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 17/144 (11%), Positives = 46/144 (31%), Gaps = 5/144 (3%) Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 T + S + +G+ + + + + K +A + + Sbjct: 719 TSGSNDGLVSSNSASTLTGQATDGYTSGNLKPDAIRVDDKGNILGEFTNGKTFAVAKIAM 778 Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIH 215 SV + G + + T +K LE SN + + ++I Sbjct: 779 ASVANNSGLEEIGGNLFKVTANSGNIVVGEAGTGGRGEMKTSALEMSNVDLSRSLTELII 838 Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239 + + + + + I +++ + I+ Sbjct: 839 IQRGYQANSKTISTSDQMLQTLIQ 862 >gi|307748585|gb|ADN91855.1| Flagellar hook protein [Campylobacter jejuni subsp. jejuni M1] Length = 690 Score = 95.7 bits (236), Expect = 5e-18, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 59/183 (32%), Gaps = 14/183 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G++ A + + +N+SN +T GF+ + F + Sbjct: 1 MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATAPTDGRG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106 ++ Q V+ GS +T D A+ GD +F + LTR G F Sbjct: 61 GSNPLQIGLGVSVSSTTRIHSQGSVQTTDKNTDVAINGDGFFMVSDDGGLTNYLTRSGDF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 K+ G+ V+ +G + Q +T +++ Sbjct: 121 KLDAYGNFVNNAGFVVQGWNINWDDQTIDSSRTPQNIFIDPGMHIPAAKSTEVAIKANLN 180 Query: 167 QGF 169 G Sbjct: 181 SGL 183 >gi|78485812|ref|YP_391737.1| hypothetical protein Tcr_1471 [Thiomicrospira crunogena XCL-2] gi|78364098|gb|ABB42063.1| Flagellar hook protein FlgE [Thiomicrospira crunogena XCL-2] Length = 538 Score = 95.7 bits (236), Expect = 5e-18, Method: Composition-based stats. Identities = 35/202 (17%), Positives = 72/202 (35%), Gaps = 9/202 (4%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66 ++ A Q L +++N++N T+G+++ + +FS++ ++ + V Sbjct: 8 TAVSGLNAASQGLGVISNNLANAQTMGYKSSRAEFSDMFYGAQS---TPGNGVRVDSITQ 64 Query: 67 SKEVGSFISTGTELDFALEGDAWF---ALESPRGIILTRDGRFKVTDDGSLVSASGKYPV 123 G+ TG +LD A++GD +F + TR+G FK+ DG + S G Sbjct: 65 DFTNGTITDTGRDLDMAIDGDGFFILEDRTGKYENVYTRNGSFKLDKDGYVTSQEGNKVQ 124 Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-MSQGFVRRENSGISPNIP 182 + + + + ++ + K + + D G I Sbjct: 125 GYLLNPALSTERNPVFETTLSSIDLDELNKTPKSTDEMNYDINVDGEENNNVDATQTPIA 184 Query: 183 PTPLEDLSGVTVKRGFLEDSNA 204 + L SN Sbjct: 185 GIENSVGGDTALAGSAL--SNI 204 Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats. Identities = 18/198 (9%), Positives = 57/198 (28%), Gaps = 10/198 (5%) Query: 52 IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDD 111 + + ++ TG + + D+ + + D Sbjct: 340 TGANSTPTGQDTANNPLDPATWTPTGNQPNMEWVVDSPITGANDPLGNPADALGVSIDVD 399 Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-----EISQKGKVIATMGLYSVDMS 166 + ++ L + G+ G + + +A +G+ + + Sbjct: 400 FTKMTQFAGSYNLRGVTQNGYAIGDLVGVYTGKDGVIEARYSNGRSVPVAQLGMANFNDK 459 Query: 167 QGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221 + + + ++ ++ G LE SN ++ E+ MI + + Sbjct: 460 NALEKLGGQSYAESFASGAVQIGTSERNGYGSINAGALEYSNVDTAGELVHMIQTQRTYQ 519 Query: 222 SITTLIDENEKSMLEAIR 239 + +I ++ ++ Sbjct: 520 ASAQVIQTSQTLTQTILQ 537 >gi|298345998|ref|YP_003718685.1| flagellar basal body and hook protein [Mobiluncus curtisii ATCC 43063] gi|304390244|ref|ZP_07372198.1| flagellar hook protein FlgE [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|298236059|gb|ADI67191.1| flagellar basal body and hook protein [Mobiluncus curtisii ATCC 43063] gi|304326726|gb|EFL93970.1| flagellar hook protein FlgE [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 484 Score = 95.7 bits (236), Expect = 5e-18, Method: Composition-based stats. Identities = 31/169 (18%), Positives = 62/169 (36%), Gaps = 14/169 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50 M S G++ + L ++N++N +T GF++ +F + + Sbjct: 1 MLRSLFTGISGLSVHQTMLDVTSNNIANVNTTGFKSASTRFEDTFSQLVRSGAAPRLNER 60 Query: 51 ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRF 106 + Q V + G+ TG LD + GD ++ ++ + TR+G F Sbjct: 61 GGMNPAQVGLGVKLQSITQNFTGGAAQMTGRNLDTMINGDGFYVLRKTNGSSVYTRNGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI 155 + G +V+A G + M I N+ + +G+ Sbjct: 121 GLDAQGQVVAADGSFVQGWMGDKDGTINASGTPGNITLPLTKTVEGRPT 169 Score = 80.7 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 18/135 (13%), Positives = 44/135 (32%), Gaps = 10/135 (7%) Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-----EISQKGKVIATMGLYSVDMSQGF 169 ++ G V + ++V G + + +A + + S G Sbjct: 347 LTGFGGVNNFGQKQVDGNMAGYMTGYSVEADGTIRGTFSNGDNRALARIAVASFANPLGL 406 Query: 170 VRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224 + +S + T + G +E SN + E +I + F + + Sbjct: 407 EKAGSSYFVETGNSGQPQIGEAGTGQRGAMTGGAIEMSNVDLAAEFTNLILSQRGFQANS 466 Query: 225 TLIDENEKSMLEAIR 239 +I +++ + E + Sbjct: 467 RVITTSDEILQELVN 481 >gi|165869539|ref|ZP_02214198.1| putative flagellar basal-body rod protein [Bacillus anthracis str. A0488] gi|190566290|ref|ZP_03019208.1| putative flagellar basal-body rod protein [Bacillus anthracis Tsiankovskii-I] gi|218902886|ref|YP_002450720.1| putative flagellar basal-body rod protein [Bacillus cereus AH820] gi|227815455|ref|YP_002815464.1| putative flagellar basal-body rod protein [Bacillus anthracis str. CDC 684] gi|164714979|gb|EDR20497.1| putative flagellar basal-body rod protein [Bacillus anthracis str. A0488] gi|190562425|gb|EDV16392.1| putative flagellar basal-body rod protein [Bacillus anthracis Tsiankovskii-I] gi|218539299|gb|ACK91697.1| putative flagellar basal-body rod protein [Bacillus cereus AH820] gi|227003269|gb|ACP13012.1| putative flagellar basal-body rod protein [Bacillus anthracis str. CDC 684] Length = 249 Score = 95.7 bits (236), Expect = 5e-18, Method: Composition-based stats. Identities = 42/246 (17%), Positives = 85/246 (34%), Gaps = 15/246 (6%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DIDQKISFVASG 62 + QR++ ++N++N T GF+ + + +I V Sbjct: 2 GMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIGSVDYAVVPA 61 Query: 63 KEYLSKEVGSFISTGTELDFALEGDA-----WFALESPRGIILTRDGRFKVTDDGSLVSA 117 +++ G+ T ++ DF L+ +F LTRDG F + D L + Sbjct: 62 ATHVNLVQGNIQMTNSDTDFLLDDGTAGTASFFVTSKNNETFLTRDGSFTLNSDRYLQTT 121 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV--DMSQGFVRRENS 175 SG + + + + IA + +V + + ++REN Sbjct: 122 SGAFVMGENNERIRIPEGAKVAVQADGTLYDAVTQNNIARLQTKTVGAEANNRLIQRENK 181 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 + TVK LE+SN + EM ++ + ++ ++ +K Sbjct: 182 SFTLAEGNIADLPNGVGTVKNYMLENSNVDMTKEMADLMTDQRMISASQRVMTSFDKIYE 241 Query: 236 EAIRNI 241 + I Sbjct: 242 KEANEI 247 >gi|157415947|ref|YP_001483203.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni 81116] gi|157386911|gb|ABV53226.1| hypothetical protein C8J_1629 [Campylobacter jejuni subsp. jejuni 81116] Length = 852 Score = 95.7 bits (236), Expect = 5e-18, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 59/183 (32%), Gaps = 14/183 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G++ A + + +N+SN +T GF+ + F + Sbjct: 1 MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATAPTDGRG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106 ++ Q V+ GS +T D A+ GD +F + LTR G F Sbjct: 61 GSNPLQIGLGVSVSSTTRIHSQGSVQTTDKNTDVAINGDGFFMVSDDGGLTNYLTRSGDF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 K+ G+ V+ +G + Q +T +++ Sbjct: 121 KLDAYGNFVNNAGFVVQGWNINWDDQTIDSSRTPQNIFIDPGMHIPAAKSTEVAIKANLN 180 Query: 167 QGF 169 G Sbjct: 181 SGL 183 Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 17/144 (11%), Positives = 46/144 (31%), Gaps = 5/144 (3%) Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 T + S + +G+ + + + + K +A + + Sbjct: 706 TSGSNDGLVSSNSASTLTGQATDGYTSGNLKPDAIRVDDKGNILGEFTNGKTFAVAKIAM 765 Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIH 215 SV + G + + T +K LE SN + + ++I Sbjct: 766 ASVANNSGLEEIGGNLFKVTANSGNIVVGEAGTGGRGEMKTSALEMSNVDLSRSLTELII 825 Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239 + + + + + I +++ + I+ Sbjct: 826 IQRGYQANSKTISTSDQMLQTLIQ 849 >gi|2316082|gb|AAC45551.1| hook protein [Campylobacter coli] Length = 851 Score = 95.7 bits (236), Expect = 5e-18, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 59/183 (32%), Gaps = 14/183 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G++ A + + +N+SN +T GF+ + F + Sbjct: 1 MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATAPTDGRG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106 ++ Q V+ GS +T D A+ GD +F + LTR G F Sbjct: 61 GSNPLQIGLGVSVSSTTRIHSQGSVQTTDKNTDVAINGDGFFMVSDDGGLTRYLTRSGDF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 K+ G+ V+ +G + Q +T +++ Sbjct: 121 KLDAYGNFVNNAGFVVQGWNINWDDQTIDSSRTPQNIFIDPGMHIPAAKSTEVAIKANLN 180 Query: 167 QGF 169 G Sbjct: 181 SGL 183 Score = 71.8 bits (174), Expect = 8e-11, Method: Composition-based stats. Identities = 17/144 (11%), Positives = 45/144 (31%), Gaps = 5/144 (3%) Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 T + S + K + + + + + K +A + + Sbjct: 705 TSGSNDGLVSSNSASTQQDKQLMGYTSGNLKPDAIRVDDKGNILGEFTNGKTFAVAKIAM 764 Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIH 215 SV + G + + T +K LE SN + + ++I Sbjct: 765 ASVANNSGLEEIGGNLFKVTANSGNIVVGEAGTGGRGEMKTAALEMSNVDLSRSLTELII 824 Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239 + + + + + I +++ + I+ Sbjct: 825 IQRGYQANSKTISTSDQMLQTLIQ 848 >gi|222823151|ref|YP_002574724.1| flagellar hook protein FlgE [Campylobacter lari RM2100] gi|222538372|gb|ACM63473.1| flagellar hook protein FlgE [Campylobacter lari RM2100] Length = 814 Score = 95.7 bits (236), Expect = 5e-18, Method: Composition-based stats. Identities = 30/205 (14%), Positives = 59/205 (28%), Gaps = 14/205 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G++ A + + +N++N +T GF+ + FS ++ Sbjct: 1 MMRSLWAGVSGLQAHQYAMDVEGNNIANVNTFGFKYSRADFSTLMSQTSKIATAPDGNLG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106 + Q G+ +T D A+ GD +F + + TR G F Sbjct: 61 GKNPMQVGLGAGVNSTTRIHSQGNIQTTDKNTDMAINGDGFFIVSNDGGTTQFFTRAGDF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 K G+ V +G + + ++ + ++ Sbjct: 121 KTDAVGNFVDNNGYTVQGWNYNQETGQIDSSKSVTDIVIPPGMSMPARPSSSVSLTANLD 180 Query: 167 QGFVRRENSGISPNIPPTPLEDLSG 191 G N+ I Sbjct: 181 SGNTLGTNASAKRPIYALDSLHGGR 205 Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 10/90 (11%), Positives = 33/90 (36%), Gaps = 5/90 (5%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLEDSNANSMYE 209 +A + L + + G N+ + +K +E SN + Sbjct: 722 LAKVALATFPNNMGLEEMGNNLYKATANSGTATIGHAGEGGRGGLKGSAIEMSNVDLSRA 781 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + ++I + + + + + I +++ + ++ Sbjct: 782 LTELIVIQRGYQANSKTITTSDQLLNTLLQ 811 >gi|30248322|ref|NP_840392.1| flagellar hook protein FlgE [Nitrosomonas europaea ATCC 19718] gi|30138208|emb|CAD84216.1| Flagella basal body rod protein [Nitrosomonas europaea ATCC 19718] Length = 410 Score = 95.7 bits (236), Expect = 5e-18, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 65/155 (41%), Gaps = 1/155 (0%) Query: 8 GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG-AIKNDIDQKISFVASGKEYL 66 GL+ A +L +N++N +TVGF+ + +F++V A+ +Q Sbjct: 6 GLSGLKAASAKLDVTGNNIANANTVGFKQSQAQFADVYANALGGGRNQIGIGTQLAAVAQ 65 Query: 67 SKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDM 126 G+ T LD A+ G+ +F +++ I TR+G+F + DG LV+AS Sbjct: 66 EFNQGNVTPTNNPLDVAITGNGFFRMDNNGSISFTRNGQFHLDKDGFLVNASNYNVTGFG 125 Query: 127 ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLY 161 A QI + +++ G+ Sbjct: 126 ADASGQIIPNIPVNLRLPTADMTPNPTTSFMTGVN 160 Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 11/125 (8%), Positives = 32/125 (25%), Gaps = 5/125 (4%) Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 D + + + + + L G ++ Sbjct: 285 NVMSQDGFASGRLAGYSISDDGQIRASYSNNVTRTVGQLVLAGFSNPNGLKPLGSNQWGE 344 Query: 180 NIPPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 E +++ +E+SN + E+ +I + + + I+ + M Sbjct: 345 TAESGLPLVGTPETGVLGSLQSSAVEESNVDLTTELVTLIMTQRVYQANAKTIETQDAVM 404 Query: 235 LEAIR 239 + Sbjct: 405 QTIMN 409 >gi|121613214|ref|YP_001001371.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni 81-176] gi|167006263|ref|ZP_02272021.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni 81-176] gi|30721660|gb|AAP34261.1| FlgE [Campylobacter jejuni subsp. jejuni 81-176] gi|87248993|gb|EAQ71955.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni 81-176] Length = 838 Score = 95.7 bits (236), Expect = 5e-18, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 59/183 (32%), Gaps = 14/183 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G++ A + + +N+SN +T GF+ + F + Sbjct: 1 MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATAPTDGRG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106 ++ Q V+ GS +T D A+ GD +F + LTR G F Sbjct: 61 GSNPLQIGLGVSVSSTTRIHSQGSVQTTDKNTDVAINGDGFFMVSDDGGLTRYLTRSGDF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 K+ G+ V+ +G + Q +T +++ Sbjct: 121 KLDAYGNFVNNAGFVVQGWNINWDTQSIDSSRTPQNIFIDPGMHIPAAKSTEVAIKANLN 180 Query: 167 QGF 169 G Sbjct: 181 SGL 183 Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 18/144 (12%), Positives = 46/144 (31%), Gaps = 5/144 (3%) Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 T + S + +G+ + + + + K +A M + Sbjct: 692 TSGSNDGLVSSNSASTLTGQATDGYTSGNLKPDAIRVDDKGNILGEFTNGKTFAVAKMAM 751 Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIH 215 SV + G + + T +K LE SN + + ++I Sbjct: 752 ASVANNSGLEEIGGNLFKVTANSGAIVVGEAGTGGRGEMKTSALEMSNVDLSRSLTELII 811 Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239 + + + + + I +++ + I+ Sbjct: 812 IQRGYQANSKTISTSDQMLQTLIQ 835 >gi|305432574|ref|ZP_07401735.1| flagellar hook protein FlgE [Campylobacter coli JV20] gi|304444285|gb|EFM36937.1| flagellar hook protein FlgE [Campylobacter coli JV20] Length = 847 Score = 95.7 bits (236), Expect = 5e-18, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 59/183 (32%), Gaps = 14/183 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G++ A + + +N+SN +T GF+ + F + Sbjct: 1 MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATAPTDGRG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106 ++ Q V+ GS +T D A+ GD +F + LTR G F Sbjct: 61 GSNPLQIGLGVSVSSTTRIHSQGSVQTTDKNTDVAINGDGFFMVSDDGGLTRYLTRSGDF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 K+ G+ V+ +G + Q +T +++ Sbjct: 121 KLDAYGNFVNNAGFVVQGWNINWDDQTIDSSRSPQNIFIDPGMHIPAAKSTEVAIKANLN 180 Query: 167 QGF 169 G Sbjct: 181 SGL 183 Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 17/144 (11%), Positives = 46/144 (31%), Gaps = 5/144 (3%) Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 T + S + +G+ + + + + K +A + + Sbjct: 701 TSGSNDGLVSSNSASTLTGQATDGYTSGNLKPDAIRVDDKGNILGEFTNGKTFAVAKIAM 760 Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIH 215 SV + G + + T +K LE SN + + ++I Sbjct: 761 ASVANNSGLEEIGGNLFKVTANSGNIVVGEAGTGGRGEMKTSALEMSNVDLSRSLTELII 820 Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239 + + + + + I +++ + I+ Sbjct: 821 IQRGYQANSKTISTSDQMLQTLIQ 844 >gi|291277389|ref|YP_003517161.1| putative flagellar basal-body rod protein [Helicobacter mustelae 12198] gi|290964583|emb|CBG40436.1| putative flagellar basal-body rod protein [Helicobacter mustelae 12198] Length = 289 Score = 95.7 bits (236), Expect = 5e-18, Method: Composition-based stats. Identities = 50/275 (18%), Positives = 108/275 (39%), Gaps = 32/275 (11%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 MQ + + + RL +++N++N +T F+ V + + + + Sbjct: 13 MQNGYYNAVGGMVTQFNRLDAISNNLANLNTNAFKRDDVVIGDYLRLYETYQQELPLKNN 72 Query: 61 SGK-----------------EYLSKEVGSFISTGTELDFAL-EGDAWFALESPRGIILTR 102 + + Y + +G+ + T LDFAL + + +FA+++P+G+ TR Sbjct: 73 TKEAAKFINRALDRVPIISDSYSDQSLGAMMQTDNPLDFALSKENLYFAIQTPQGVRYTR 132 Query: 103 DGRFKVTDDGSLVSASGKYPVLD-----------MASVPIQIPQKDEIFNVGEKGEISQK 151 DG F V +DG L + G + + I+ + I+ E + Sbjct: 133 DGSFVVGEDGMLSTKEGYHVLSRTGLENEEGIAINVQSQIEADKNGNIYFRVSDNEAVGE 192 Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIP--PTPLEDLSGVTVKRGFLEDSNANSMYE 209 + + + S + + + S + +V++ FLE SN N++ E Sbjct: 193 AEQNNAIAVVSFVNPRLLKKEGKNLYSYPEDKKSDRQNLATTESVRQSFLEKSNVNAVIE 252 Query: 210 MGQMIHLTQKFNSITTLIDEN-EKSMLEAIRNIAS 243 M +I + + + ++ + + EAI +A+ Sbjct: 253 MTNLIETNRLVDMYSKVLKTHMDDLNTEAISKLAT 287 >gi|238927475|ref|ZP_04659235.1| flagellar hook protein FlgE [Selenomonas flueggei ATCC 43531] gi|238884757|gb|EEQ48395.1| flagellar hook protein FlgE [Selenomonas flueggei ATCC 43531] Length = 680 Score = 95.7 bits (236), Expect = 5e-18, Method: Composition-based stats. Identities = 31/146 (21%), Positives = 55/146 (37%), Gaps = 13/146 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S ++ + R+ V +N++N +T GF+ +V F++++ + Sbjct: 1 MIRSMFSAVSGLKGHQTRMDVVGNNIANVNTTGFKASRVTFADMISQNLSGASAPNGTIG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFAL-EGDAWFALESPRGIILTRDGRFK 107 Q ++ L GS TG D A+ GD F + + TR+G F Sbjct: 61 GVNPKQIGLGMSVASTDLLYTNGSVQQTGKNTDIAISRGDGLFVVSKGQQKFYTRNGAFS 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQI 133 +G+L S V + I Sbjct: 121 FDAEGNLTIPSTGLYVQGYMANNGVI 146 Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 12/88 (13%), Positives = 28/88 (31%), Gaps = 4/88 (4%) Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTV----KRGFLEDSNANSMYEMG 211 A + + + G + + + + LE SN + + Sbjct: 590 AQIAMAQFNNPSGLTKMGGNLYQESNNSGTRTISGASDIGTELTTSALEMSNVDLADQFS 649 Query: 212 QMIHLTQKFNSITTLIDENEKSMLEAIR 239 MI + F S + +I +++ + I Sbjct: 650 DMIITQRGFQSNSKMITVSDEMLETLIN 677 >gi|160880840|ref|YP_001559808.1| hypothetical protein Cphy_2708 [Clostridium phytofermentans ISDg] gi|160429506|gb|ABX43069.1| protein of unknown function DUF1078 domain protein [Clostridium phytofermentans ISDg] Length = 479 Score = 95.7 bits (236), Expect = 5e-18, Method: Composition-based stats. Identities = 27/142 (19%), Positives = 51/142 (35%), Gaps = 15/142 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M S G++ + ++ + +N+SN +TVGF+ FS+++ Sbjct: 1 MMRSLYSGVSGLRVHQTKMDVIGNNISNVNTVGFKASSATFSDILYQTTKSASGPNPNTG 60 Query: 61 SGKEYLS---------------KEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGR 105 + + G T D +EGD +F + + G T+ G Sbjct: 61 TAGTNAMQIGLGANLASITASITKTGGSQRTDNPFDLMIEGDGFFVVNNGVGNFFTKAGS 120 Query: 106 FKVTDDGSLVSASGKYPVLDMA 127 F V G+L + +G + Sbjct: 121 FNVDAAGTLCTPTGATVMGWQP 142 Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 24/148 (16%), Positives = 44/148 (29%), Gaps = 10/148 (6%) Query: 98 IILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157 + G V + I I Q+ IF + G+ G+V+ Sbjct: 333 TMYNNSGTTTVESTKGAKADGTGAGKAAGNMSGISIDQQGMIFGTYDNGDRKLLGQVVVA 392 Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSG------VTVKRGFLEDSNANSMYEMG 211 + G N+ S + G LE SN + + Sbjct: 393 ----TFSNPAGLEAIGNNMFSATPNSGEFNGVGEDITSSGGKFITGVLEMSNVDLSQQFT 448 Query: 212 QMIHLTQKFNSITTLIDENEKSMLEAIR 239 +MI + F + + +I ++ + E I Sbjct: 449 EMITTQRGFQANSRIITTSDTLLEELIN 476 >gi|289666047|ref|ZP_06487628.1| flagellar hook protein FlgE [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 407 Score = 95.7 bits (236), Expect = 5e-18, Method: Composition-based stats. Identities = 29/128 (22%), Positives = 57/128 (44%), Gaps = 2/128 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--ISFVAS 61 FN L+ A L+ ++N++N +T GF+ + +F+++ + + + S V Sbjct: 2 GFNTSLSGINAANADLNVTSNNIANVNTTGFKESRAEFADMFQSTSYGLSRNAVGSGVRV 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 G+ TG LD A+ G+ +F + S + TR G F+ +G +V+ G Sbjct: 62 SNVAQQFSQGNIDPTGRSLDLAISGEGFFTVSSNGAKMYTRAGNFQTDANGYVVNPQGAR 121 Query: 122 PVLDMASV 129 + + Sbjct: 122 LQVFAPNP 129 Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 33/92 (35%), Gaps = 5/92 (5%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSM 207 K + + L S QG + N+ + + + V+ G LE S + Sbjct: 314 KPLGQVALSSFVNPQGLQSQGNNMWAESYTSGAARTGAPNTSDLGQVESGSLEASTVDLT 373 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 ++ MI + F + + +I ++ I Sbjct: 374 EQLVNMIVAQRNFQANSQMISTQDQVTQTIIN 405 >gi|268680907|ref|YP_003305338.1| flagellar hook protein FlgE [Sulfurospirillum deleyianum DSM 6946] gi|268618938|gb|ACZ13303.1| flagellar hook protein FlgE [Sulfurospirillum deleyianum DSM 6946] Length = 851 Score = 95.7 bits (236), Expect = 5e-18, Method: Composition-based stats. Identities = 28/182 (15%), Positives = 59/182 (32%), Gaps = 14/182 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M + G+ A + + ++N++N +T G++ + FS ++ Sbjct: 1 MMRALWAGVTGLQAHQIAMDVESNNIANVNTTGYKYSRANFSNLLSQTVSIATAPQGELG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGRF 106 + Q E GS +T + D A+ GD +F + G TR+G F Sbjct: 61 GKNSMQIGLGTTISTVTKIFEQGSIETTDKDTDLAISGDGFFVVSPDGGTTYKYTRNGDF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 +G+ V ++G + + ++ ++ Sbjct: 121 SFDANGNFVDSNGYIIQGWLRDQETGQIDTTSPISNILITPGYTTPANATSIVSIKANLD 180 Query: 167 QG 168 G Sbjct: 181 SG 182 Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 10/94 (10%), Positives = 32/94 (34%), Gaps = 5/94 (5%) Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNAN 205 + +A + + + + G + +V+ LE SN + Sbjct: 756 RSFALAQVAMSTFTNNGGLESDGGNCYIQTSNSGDPVFGQAGTGGKGSVQSSSLEMSNVD 815 Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + Q+I + + + + + I ++ + ++ Sbjct: 816 LSRSLTQLIVIQRGYQANSKTITTADEMLNTLLQ 849 >gi|146281771|ref|YP_001171924.1| flagellar hook protein FlgE [Pseudomonas stutzeri A1501] gi|145569976|gb|ABP79082.1| flagellar hook protein FlgE [Pseudomonas stutzeri A1501] Length = 438 Score = 95.3 bits (235), Expect = 6e-18, Method: Composition-based stats. Identities = 39/203 (19%), Positives = 79/203 (38%), Gaps = 8/203 (3%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASG 62 FN+ L+ A L+ +N++N T GF+ + +F+++ + + S V + Sbjct: 3 FNVALSGLNAASTDLNVTGNNIANVGTTGFKASRAEFADLYATSMLGSGGNAVGSGVTTA 62 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ G+ +F + + ++ TR G FK D+G ++++ G Sbjct: 63 DIAQQFTQGNITNTGNSLDLAISGNGYFMVSNNGSMLYTRAGAFKTDDEGYVINSEGYNL 122 Query: 123 VLDMASVPIQI-----PQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS-G 176 + I + S + +A SV + F ++S Sbjct: 123 QGYGVNANGDIVSGVTTNLKVDSSNQAPNATSSVVETLALNSNSSVPNNTPFDASDSSTY 182 Query: 177 ISPNIPPTPLEDLSGVTVKRGFL 199 P + T+ + F+ Sbjct: 183 NWSTSVPLYDTQGNSHTMTQYFV 205 Score = 71.1 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 18/123 (14%), Positives = 41/123 (33%), Gaps = 5/123 (4%) Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 PV D + + + + + KVI + L + SQG + + + Sbjct: 314 PVQDGYTTGQLSGLSIDDTGMMFATYTNGQSKVIGQVVLANFTNSQGLASVGGTAWAQTL 373 Query: 182 PPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + + ++ G LEDSN + ++ +I + + + ++ Sbjct: 374 ASGEPAIGTPGSGTLGSLQSGALEDSNVDLTAQLVNLIVAQRNYQANAKTVETESAIAQT 433 Query: 237 AIR 239 I Sbjct: 434 IIN 436 >gi|326796597|ref|YP_004314417.1| flagellar hook-basal body protein [Marinomonas mediterranea MMB-1] gi|326547361|gb|ADZ92581.1| flagellar hook-basal body protein [Marinomonas mediterranea MMB-1] Length = 565 Score = 95.3 bits (235), Expect = 6e-18, Method: Composition-based stats. Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 3/126 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI---KNDIDQKISFVA 60 FN L+ A L +N++N DT GF+ +++F ++ + S V+ Sbjct: 2 GFNTALSGIKASADYLGVTGNNIANADTTGFKKSRIEFGDLYNTNVIGSGSSNTIGSGVS 61 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 G++ TG LD A++G +F ++ TR G FK+ ++G+LV+ G Sbjct: 62 VNNVAQDFSAGNYNDTGNNLDVAIDGSGFFVVDQGGVQTYTRAGDFKLDEEGNLVTNDGG 121 Query: 121 YPVLDM 126 + Sbjct: 122 FVQGYN 127 Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats. Identities = 19/149 (12%), Positives = 44/149 (29%), Gaps = 5/149 (3%) Query: 96 RGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI 155 LT + D S D + + +Q+ + Sbjct: 415 DPTNLTGELEISFDDSTQYAITSTDTFSQDGFAAGELQGVSFDEDGFLVATYTNQQTATL 474 Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEM 210 + L + D + G ++G + + ++K G LE+SN + E+ Sbjct: 475 GQIALATFDNTDGLNPSGDTGWVASSSSGAANIGKANTGTLGSIKGGSLEESNVDLTSEL 534 Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +I + + + + ++ I Sbjct: 535 VALIEAQRNYQANSKTLETENTVTQTIIN 563 >gi|90408060|ref|ZP_01216231.1| flagellar hook protein [Psychromonas sp. CNPT3] gi|90310817|gb|EAS38931.1| flagellar hook protein [Psychromonas sp. CNPT3] Length = 473 Score = 95.3 bits (235), Expect = 6e-18, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 72/196 (36%), Gaps = 6/196 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61 SFNI L+ A + L + A+N++N +TVGF+ + +F V N + V++ Sbjct: 2 SFNIALSGISAAQTDLDSTANNIANVNTVGFKESRAEFESVYANSLFTNSKTKVGDGVST 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII---LTRDGRFKVTDDGSLVSAS 118 GS T LD A+ G +FA TR G FK+ + +V S Sbjct: 62 AAVAQQFHQGSLKFTQNPLDLAITGSGFFATAGNLEDRDLSYTRSGTFKLNSENFVVDNS 121 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178 G Y + + + + + ++++ G + + Sbjct: 122 GNYLQAFPVNEDGTSSSVSLSTTQPIQIPETAGTPIPTSEIGITLNLPAG-DKALDPAKF 180 Query: 179 PNIPPTPLEDLSGVTV 194 P + + VT+ Sbjct: 181 DPDDPDTYNNATSVTI 196 Score = 71.8 bits (174), Expect = 7e-11, Method: Composition-based stats. Identities = 16/97 (16%), Positives = 34/97 (35%), Gaps = 4/97 (4%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP----LEDLSGVTVKRGFLEDS 202 + + ++ + + QG + +S I+ P S V LE S Sbjct: 375 YSNGTSQPLSRVSIVRFRNEQGLTQTGSSWIATQNSGEPLAGEANSGSFGAVNSAALEQS 434 Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 N N E+ +I + F + + ++ N ++ Sbjct: 435 NVNLTTELVDLITAQRNFQANSRALEINNTLQQTILQ 471 >gi|283953666|ref|ZP_06371197.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni 414] gi|283794707|gb|EFC33445.1| flagellar hook protein [Campylobacter jejuni subsp. jejuni 414] Length = 864 Score = 95.3 bits (235), Expect = 6e-18, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 58/183 (31%), Gaps = 14/183 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G++ A + + +N+SN +T GF+ + F + Sbjct: 1 MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATAPTDGRG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106 + Q V+ GS +T D A+ GD +F + LTR G F Sbjct: 61 GQNPLQIGLGVSVNSTTRIHSQGSVQTTDKNTDVAINGDGFFMVSDDGGLTNYLTRSGDF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 K+ G+ V+ +G + Q +T +++ Sbjct: 121 KLDAYGNFVNNAGFVVQGWNINWDDQTIDSSRTPQNIFVDPGMHIPAAQSTEVAIKANLN 180 Query: 167 QGF 169 G Sbjct: 181 SGL 183 Score = 72.6 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 17/144 (11%), Positives = 46/144 (31%), Gaps = 5/144 (3%) Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 T + S + +G+ + + + + K +A + + Sbjct: 718 TSGSNDGLVSSNSASTLTGQATDGYTSGNLKPDAIRVDDKGNILGEFTNGKTFAVAKIAM 777 Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIH 215 SV + G + + T +K LE SN + + ++I Sbjct: 778 ASVANNSGLEEIGGNLFKVTANSGNIVVGEAGTGGRGEMKTSALEMSNVDLSRSLTELII 837 Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239 + + + + + I +++ + I+ Sbjct: 838 IQRGYQANSKTISTSDQMLQTLIQ 861 >gi|313200563|ref|YP_004039221.1| flagellar basal body flae domain-containing protein [Methylovorus sp. MP688] gi|312439879|gb|ADQ83985.1| flagellar basal body FlaE domain protein [Methylovorus sp. MP688] Length = 402 Score = 95.3 bits (235), Expect = 6e-18, Method: Composition-based stats. Identities = 32/123 (26%), Positives = 59/123 (47%), Gaps = 2/123 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ--KISFVAS 61 SF GL+ A + L + +N++N +TVGF+ + +F++V N V Sbjct: 2 SFQQGLSGLNAASKSLDVIGNNVANANTVGFKQSRAEFADVYANALNGSGTGSAGIGVKV 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 G+ +T LD A+ G+ +F L + I +R+G+F++ G +V++SG+ Sbjct: 62 ADIQRQFTQGNITNTENPLDIAINGNGFFRLSNSGAITYSRNGQFQLDKAGYIVTSSGER 121 Query: 122 PVL 124 Sbjct: 122 LTG 124 Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 31/98 (31%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLED 201 + + K +A + L G N+ + T++ ED Sbjct: 303 YTNGQAKALAQVVLAKFANPNGLSALGNNQFAETADAGVPVIGKAGTGGLGTLQSSATED 362 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ MI + + + I ++ + + Sbjct: 363 SNVDLTAELVNMITAQRYYQANAQTIKTQDQVLQTLVN 400 >gi|303240279|ref|ZP_07326798.1| fagellar hook-basal body protein [Acetivibrio cellulolyticus CD2] gi|302592189|gb|EFL61918.1| fagellar hook-basal body protein [Acetivibrio cellulolyticus CD2] Length = 439 Score = 95.3 bits (235), Expect = 6e-18, Method: Composition-based stats. Identities = 31/142 (21%), Positives = 53/142 (37%), Gaps = 16/142 (11%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ A + ++ + +N++N +TV +++ +V F EV Sbjct: 1 MMRSMFSGVSGLRAHQTKMDVIGNNVANVNTVAYKSGRVTFQEVFSQTIKGAGAPDTATG 60 Query: 54 -------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL--TRDG 104 Q + GS T D A+EGD +F ++ TR G Sbjct: 61 RGGTNPMQVGLGIGVSSVDTITTRGSLQRTDNPTDLAIEGDGFFIVKGGSADTYRFTRAG 120 Query: 105 RFKVTDDGSLVSASGKYPVLDM 126 F + G+LV+ SG Sbjct: 121 NFGIDKTGNLVTGSGMNVYGWQ 142 Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 19/121 (15%), Positives = 41/121 (33%), Gaps = 6/121 (4%) Query: 125 DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT 184 D S + + + + + + + L S + G + N+ P Sbjct: 316 DGYSTGTLVSFSIGSDGIITGIYSNGQQQPLGLIALASFENPAGLQKSGNNMFIPTTNSG 375 Query: 185 PLEDL------SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 + T+ G LE SN + E MI + F + + +I +++ + E + Sbjct: 376 DFKKGVKAGSEGVGTLNPGTLEMSNVDLSTEFTDMIVTQRGFQANSRIITTSDEMLQELV 435 Query: 239 R 239 Sbjct: 436 N 436 >gi|239995125|ref|ZP_04715649.1| flagellar hook protein FlgE [Alteromonas macleodii ATCC 27126] Length = 461 Score = 95.3 bits (235), Expect = 7e-18, Method: Composition-based stats. Identities = 39/170 (22%), Positives = 68/170 (40%), Gaps = 5/170 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61 SFNI L+ A ++ L A+N++N +TVGF+ + +F +V A + V + Sbjct: 2 SFNIALSGVSAAQKDLDVTANNIANVNTVGFKESRAEFGDVYAASLLSGGKTKVGDGVLT 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII---LTRDGRFKVTDDGSLVSAS 118 + GS T T LD A+ G+ +FA TR G+FK+ D +V+++ Sbjct: 62 QEVAQQFSQGSLQFTNTSLDLAITGNGFFATVPEITSRDFSFTRAGQFKLDSDNFVVNSN 121 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 G + + + S T +++ G Sbjct: 122 GDNLLGFPVNSDGTSASVALSTTEPVRIPDSSGSPAQTTEVDIRMNLPAG 171 Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 30/93 (32%), Gaps = 5/93 (5%) Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANS 206 + I + L QG + ++ +I T + LE +N N Sbjct: 367 SEPIVRVALVRFSNEQGLTQESSTQWKESILSGEALAGEATTGTFGEINSSALEQANVNL 426 Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E+ MI + F + + ++ N + Sbjct: 427 TTELIDMIIAQRNFQANSRALEVNNSLNQTILN 459 >gi|57236913|ref|YP_179866.1| flagellar hook protein FlgE [Campylobacter jejuni RM1221] gi|57165717|gb|AAW34496.1| flagellar hook protein [Campylobacter jejuni RM1221] gi|315059173|gb|ADT73502.1| Flagellar hook subunit protein [Campylobacter jejuni subsp. jejuni S3] Length = 845 Score = 95.3 bits (235), Expect = 7e-18, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 59/183 (32%), Gaps = 14/183 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G++ A + + +N+SN +T GF+ + F + Sbjct: 1 MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATAPTDGRG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106 ++ Q V+ GS +T D A+ GD +F + LTR G F Sbjct: 61 GSNPLQIGLGVSVSSTTRIHSQGSVQTTDKNTDVAINGDGFFMVSDDGGLTRYLTRSGDF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 K+ G+ V+ +G + Q +T +++ Sbjct: 121 KLDAYGNFVNNAGFVVQGWNINWDDQTIDSSRSPQNIFIDPGMHIPAAKSTEVAIKANLN 180 Query: 167 QGF 169 G Sbjct: 181 SGL 183 Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 17/144 (11%), Positives = 46/144 (31%), Gaps = 5/144 (3%) Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 T + S + +G+ + + + + K +A + + Sbjct: 699 TSGSNDGLVSSNSASTLTGQATDGYTSGNLKPDAIRVDDKGNILGEFTNGKTFAVAKIAM 758 Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIH 215 SV + G + + T +K LE SN + + ++I Sbjct: 759 ASVANNSGLEEIGGNLFKVTANSGAIVVGEAGTGGRGEMKTSALEMSNVDLSRSLTELII 818 Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239 + + + + + I +++ + I+ Sbjct: 819 IQRGYQANSKTISTSDQMLQTLIQ 842 >gi|330893070|gb|EGH25731.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv. mori str. 301020] Length = 202 Score = 95.3 bits (235), Expect = 7e-18, Method: Composition-based stats. Identities = 34/181 (18%), Positives = 67/181 (37%), Gaps = 16/181 (8%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------------QKI 56 A + L+T+++N++N T GF++ + +F +++ IK Q Sbjct: 22 TGLAAQDTNLTTISNNLANVSTTGFKSDRAEFQDLLYQIKRQPGAQSTQDSELPSGLQLG 81 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLV 115 + V + GS +T LD A+ G +F + P G +RDG F + +G +V Sbjct: 82 TGVRIVGTQKNFTAGSLQTTNNPLDLAVNGRGFFQVTQPDGTVAYSRDGTFHLDANGQIV 141 Query: 116 SASGK--YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRE 173 +A+G P + + + + ++I + G Sbjct: 142 TANGYALEPAIVVPQNAQTFTVGQDGTVSVTLAGATATPQIIGNIQTADFINPAGLQAIG 201 Query: 174 N 174 Sbjct: 202 G 202 >gi|149182512|ref|ZP_01860985.1| flagellar hook protein [Bacillus sp. SG-1] gi|148849772|gb|EDL63949.1| flagellar hook protein [Bacillus sp. SG-1] Length = 396 Score = 95.3 bits (235), Expect = 7e-18, Method: Composition-based stats. Identities = 35/201 (17%), Positives = 65/201 (32%), Gaps = 12/201 (5%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID----------- 53 G++ + +L + +N++N +T GF+ +V F + + + Sbjct: 1 MYSGISGMKNFQTKLDVIGNNIANVNTYGFKKGRVTFKDTMNQTISGASAAQEARGGRNP 60 Query: 54 -QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDG 112 Q S STG LD A+ GD +F ++ +R G F + D+G Sbjct: 61 MQVGLGSTLSTIDTIHTQSSLQSTGRPLDLAINGDGYFVVKQGDAQFYSRAGNFYLDDNG 120 Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172 +LV+ G V I + E ++ + + Q Sbjct: 121 TLVNGDGMKVQSYENGVLQDIKVNVNAQLPAKITESISMFGNLSNDAVGNEPFVQQINVV 180 Query: 173 ENSGISPNIPPTPLEDLSGVT 193 N G + + T Sbjct: 181 TNDGKQITLDMKLTPQGTPST 201 Score = 83.0 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 27/189 (14%), Positives = 57/189 (30%), Gaps = 7/189 (3%) Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVS 116 F+ + + G +D A L +T++ + Sbjct: 206 EFINQNGDTPLNSAAYVLDFGNPVDPAANPPN-VDLPYTDSNGITQNLNVTMDYTQLTNL 264 Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV--IATMGLYSVDMSQGFVRREN 174 D + I ++GE + G++ I + L G + Sbjct: 265 GGDLSAAADPDGNTAGSLESFNIGSMGEINGVYSNGEITTIGYLALAKFSNPSGLTKAGG 324 Query: 175 SGISPNIPPTPLEDL----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + ++ T+ G LE SN + E +MI + F + T +I + Sbjct: 325 NSFQQSVNSGTPNVNVAGEGRGTIVSGSLEMSNVDLSEEFTEMISAQRGFQANTRIITTS 384 Query: 231 EKSMLEAIR 239 ++ + E + Sbjct: 385 DEILQELVN 393 >gi|121596117|ref|YP_988013.1| hypothetical protein Ajs_3830 [Acidovorax sp. JS42] gi|120608197|gb|ABM43937.1| protein of unknown function DUF1078 domain protein [Acidovorax sp. JS42] Length = 538 Score = 95.3 bits (235), Expect = 7e-18, Method: Composition-based stats. Identities = 36/187 (19%), Positives = 71/187 (37%), Gaps = 3/187 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN--DIDQKISFVAS 61 F GL+ A + L + N++N++T GF+ + +F+ ++ + V Sbjct: 2 GFQQGLSGLNASAKNLDVIGHNIANSNTTGFKASRTEFAAMIASAIGAASGTNSGIGVEV 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLVSASGK 120 G+ TG LD A+ G+ +F L+ P G TR G FK+ + G++V+ G Sbjct: 62 SAIAQQFNQGNLTVTGNSLDVAINGNGFFTLQMPDGSRAYTRAGNFKLDNVGNVVTNDGA 121 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 + + + + + ++ + +S +P Sbjct: 122 QVMGYPIDPVTGLRTSSTAVPLTFPTTAPIPARQTTAIKTAFNLDARTPNAKGDSSATPP 181 Query: 181 IPPTPLE 187 +P TP Sbjct: 182 VPETPRT 188 Score = 78.8 bits (192), Expect = 6e-13, Method: Composition-based stats. Identities = 14/89 (15%), Positives = 29/89 (32%), Gaps = 5/89 (5%) Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEM 210 + L S +QG + + ++ G LEDSN + E+ Sbjct: 448 GQVALASFRNTQGLAAVGGNNWVETYESGQPVMGAPTDGNFGALRAGALEDSNVDLTAEL 507 Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIR 239 M+ + + + I ++ M + Sbjct: 508 VNMMTAQRAYQANAQTIKTQDQVMSTLVN 536 >gi|58582195|ref|YP_201211.1| flagellar hook protein FlgE [Xanthomonas oryzae pv. oryzae KACC10331] gi|84624088|ref|YP_451460.1| flagellar hook protein FlgE [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|58426789|gb|AAW75826.1| flagellar biosynthesis hook protein [Xanthomonas oryzae pv. oryzae KACC10331] gi|84368028|dbj|BAE69186.1| flagellar biosynthesis hook protein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 407 Score = 95.3 bits (235), Expect = 7e-18, Method: Composition-based stats. Identities = 29/128 (22%), Positives = 58/128 (45%), Gaps = 2/128 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--ISFVAS 61 +FN L+ A L+ ++N++N +T GF+ + +F+++ + + + S V Sbjct: 2 AFNTSLSGISAANADLNVTSNNIANVNTTGFKESRAEFADMFQSTSYGLSRNAVGSGVRV 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 G+ TG LD A+ G+ +F + S + TR G F+ +G +V+ G Sbjct: 62 SNVAQQFSQGNIDPTGRSLDLAISGEGFFTVSSNGAKMYTRAGNFQTDANGYVVNPQGAR 121 Query: 122 PVLDMASV 129 + + Sbjct: 122 LQVFAPNP 129 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 34/92 (36%), Gaps = 5/92 (5%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSM 207 K + + L S QG + N+ + + + T ++ G LE S + Sbjct: 314 KPLGQVALSSFVNPQGLQSQGNNMWAESYTSGAARTSAPGTSDLGQIESGSLESSTVDLT 373 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 ++ MI + F + + +I ++ I Sbjct: 374 EQLVNMIVAQRNFQANSQMISTQDQVTQTIIN 405 >gi|50954410|ref|YP_061698.1| flagellar hook protein [Leifsonia xyli subsp. xyli str. CTCB07] gi|50950892|gb|AAT88593.1| flagellar hook protein [Leifsonia xyli subsp. xyli str. CTCB07] Length = 390 Score = 95.3 bits (235), Expect = 7e-18, Method: Composition-based stats. Identities = 31/138 (22%), Positives = 51/138 (36%), Gaps = 12/138 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M S + G+ A + L A+N++N +T GF+ V+F + + + Sbjct: 1 MLRSLDSGVFGLQAQQTMLDVTANNIANVNTAGFKASSVQFEDALSQVTRTASAPTDVIG 60 Query: 56 -------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 V + G+ +TG + L GD +F + S TR G F Sbjct: 61 GTTPAAVGLGVRAAGIDTDWTQGATQTTGKATNLTLNGDGFFVIRSAGQTQYTRAGNFTT 120 Query: 109 TDDGSLVSASGKYPVLDM 126 D G+LV+ G Sbjct: 121 DDSGTLVTPDGARVQGWG 138 Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 33/88 (37%), Gaps = 3/88 (3%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLE---DLSGVTVKRGFLEDSNANSMYEMG 211 I + + + GF + +S + + D T+ G E SN + E Sbjct: 299 IGRVAVATFSNPSGFQKAGSSAFTATADSGIPQVAADSGTGTITVGAYEGSNVDLGREFT 358 Query: 212 QMIHLTQKFNSITTLIDENEKSMLEAIR 239 +I + F + +I +++ + E + Sbjct: 359 NLIVSQRAFQASARVITTSDEILQELTQ 386 >gi|242309658|ref|ZP_04808813.1| flagellar hook protein [Helicobacter pullorum MIT 98-5489] gi|239523659|gb|EEQ63525.1| flagellar hook protein [Helicobacter pullorum MIT 98-5489] Length = 750 Score = 94.9 bits (234), Expect = 8e-18, Method: Composition-based stats. Identities = 33/141 (23%), Positives = 53/141 (37%), Gaps = 14/141 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ A + L ++N++N +T GF+ + FS +V K Sbjct: 1 MLRSLWSGVSGMQAHQVALDVESNNIANVNTNGFKYSRADFSTMVSQTKRSATIPYAGYG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106 GS +T + D ALEG+ F + + + TRDG F Sbjct: 61 GVNDYSVGLGTGIETTTKVFSQGSLQNTDRKADLALEGNGMFVVSNNGGFTNMYTRDGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMA 127 G+LV+ SG + Sbjct: 121 SFDAVGNLVTTSGYIVQGWVR 141 Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 13/127 (10%), Positives = 42/127 (33%), Gaps = 5/127 (3%) Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + D + + + + + +A + + + +G ++ Sbjct: 620 SQANKVTGDGYASGMLQDFYFDATGTMIGKFDNGQNLALAQVAVATFANYEGLQESGSNL 679 Query: 177 ISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 S + + T ++ LE SN + + Q+I + + F + + I ++ Sbjct: 680 YSESPNSGQATIGTAGTGGRANIQASKLEMSNTDLSRGLTQLIVVQRGFQASSKSITTSD 739 Query: 232 KSMLEAI 238 + + + Sbjct: 740 QILNTLL 746 >gi|315928464|gb|EFV07776.1| flagellar hook protein flgE [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 437 Score = 94.9 bits (234), Expect = 8e-18, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 59/183 (32%), Gaps = 14/183 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G++ A + + +N+SN +T GF+ + F + Sbjct: 1 MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATAPTDGRG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106 ++ Q V+ GS +T D A+ GD +F + LTR G F Sbjct: 61 GSNPLQIGLGVSVSSTTRIHSQGSVQTTDKNTDVAINGDGFFMVSDDGGLTRYLTRSGDF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 K+ G+ V+ +G + Q +T +++ Sbjct: 121 KLDAYGNFVNNAGFVVQGWNINWDTQSIDSSRTPQNIFIDPGMHIPAAKSTEVAIKANLN 180 Query: 167 QGF 169 G Sbjct: 181 SGL 183 >gi|71280733|ref|YP_268222.1| flagellar hook protein FlgE [Colwellia psychrerythraea 34H] gi|71146473|gb|AAZ26946.1| flagellar hook protein FlgE [Colwellia psychrerythraea 34H] Length = 554 Score = 94.9 bits (234), Expect = 8e-18, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 73/196 (37%), Gaps = 6/196 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61 SFNI L+ A ++ L ++N++N +TVGF+ + +F +V + + V + Sbjct: 2 SFNIALSGLNAAQKDLDVSSNNIANVNTVGFKESRAEFVDVYASSLLAAGKTKVGDGVLT 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESP---RGIILTRDGRFKVTDDGSLVSAS 118 GS T LD A+ G+ +FA TR G+FK+ D +V++ Sbjct: 62 ADVAQQFSQGSIQFTNNALDLAITGNGFFATVPELGSLETSYTRAGQFKLNSDNFVVNSQ 121 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178 G + + + + + +++ G S + Sbjct: 122 GGHLLGFPVNPDGSSASVSLSTAEPIRIPTESGTPTKTSEVDVRMNLPAG-AGYITSAPA 180 Query: 179 PNIPPTPLEDLSGVTV 194 P PL S +V Sbjct: 181 NFDPEDPLTFNSSTSV 196 Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 29/245 (11%), Positives = 72/245 (29%), Gaps = 31/245 (12%) Query: 10 AAQLALEQRLSTVADNMSNTDT----------VGFRTIKVKFSEVVGAIKNDIDQKISFV 59 AA A + + ++++ T G + ++ ++ I + Sbjct: 324 AALNAQTVSETNLTNSLAIASTAISATTPESGTGTKGARLTYNSSGDFISQSPSPTNGGI 383 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119 + G+ + ++DF L+ P T+ V+A Sbjct: 384 RTVDFSSHLPNGADPTQTVKVDFNLD------TAGPNPNEPTQFAS------NFEVTALN 431 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 + + I+I + G ++ + + QG + S Sbjct: 432 QDGLAVGRLTGIEIGVDGLVRATYSNGTSQPLSRI----AMVNFANEQGLSQTGGSNWKE 487 Query: 180 N-----IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 + + T+ LE SN N E+ +I + F + + ++ + + Sbjct: 488 SLVSGKALAGEAGSGTFGTINSSALEQSNVNLTTELIDLISAQRNFQANSRALEVDNQLN 547 Query: 235 LEAIR 239 ++ Sbjct: 548 QTILQ 552 >gi|304570583|ref|YP_388203.2| flagellar hook protein FlgE [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 547 Score = 94.9 bits (234), Expect = 8e-18, Method: Composition-based stats. Identities = 34/134 (25%), Positives = 56/134 (41%), Gaps = 5/134 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA---IKNDIDQKISFVA 60 S G++ LA +R++ + +N++N +TVGF+ ++ F + + + Q V Sbjct: 6 SMWTGISGLLAHGERMNVLGNNIANVNTVGFKGARMDFEDFISQDVNTASGTRQVGRGVG 65 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI--ILTRDGRFKVTDDGSLVSAS 118 G Y GSF +T D A+ G +FA+ TR G F+ +G LV Sbjct: 66 IGTIYGDFSQGSFETTTEATDLAIGGRGFFAVSPKGEETAYYTRAGNFRFDKEGYLVDPH 125 Query: 119 GKYPVLDMASVPIQ 132 G P Sbjct: 126 GYVLQGWQIETPRP 139 Score = 78.4 bits (191), Expect = 8e-13, Method: Composition-based stats. Identities = 30/216 (13%), Positives = 55/216 (25%), Gaps = 8/216 (3%) Query: 30 DTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAW 89 T G+ FS + + + + A T + + Sbjct: 331 STNGYPMFVANFSGI--SNASYVTPNPDPAAQPYIMELNLGLKNSDPSTWASAGVSNASL 388 Query: 90 FALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEIS 149 L + + S +S + + +G S Sbjct: 389 VGTNVANLPSLGNQAERQSSATTSFSGSSSTPTRYQDGYTFGFLQNVTVTRDGILQGRYS 448 Query: 150 QKGKV-IATMGLYSVDMSQGFVRRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSN 203 + + + LY R + S + P P TV LE SN Sbjct: 449 NGAVLDLYQITLYDFQSKDNLRREGGNLFSESNASGLAAPGPANANGYGTVNSNSLEQSN 508 Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + E MI + F S + +I + + I+ Sbjct: 509 VDLAKEFVNMITTQRGFQSNSKVITTTDTMLEVVIQ 544 >gi|228920482|ref|ZP_04083827.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228839112|gb|EEM84408.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 249 Score = 94.9 bits (234), Expect = 8e-18, Method: Composition-based stats. Identities = 42/246 (17%), Positives = 80/246 (32%), Gaps = 15/246 (6%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DIDQKISFVASG 62 + QR++ ++N++N T GF+ + + +I V Sbjct: 2 GMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIGSVDYAVVPA 61 Query: 63 KEYLSKEVGSFISTGTELDF-----ALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSA 117 +++ G+ T + DF A ++F LTRDG F + D L ++ Sbjct: 62 ATHVNLVQGNIQMTNSATDFFLDDGAAGTTSFFVTSKNDETFLTRDGSFTLNSDRYLQTS 121 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG--FVRRENS 175 SG + + + I + +VD V+REN Sbjct: 122 SGAFVIGENNERIRIPEGAKVAVQADGTLYDEVTQNNIGRLQTKTVDAETNARLVQRENK 181 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 + VK LE+SN + EM ++ + + ++ +K Sbjct: 182 SFTLAEGNIANLPNGTGIVKNHMLENSNVDMTKEMADLMTDQKMIQASQRVMTSFDKIYE 241 Query: 236 EAIRNI 241 + I Sbjct: 242 KEANEI 247 >gi|94986792|ref|YP_594725.1| flagellar hook protein FlgE [Lawsonia intracellularis PHE/MN1-00] gi|94731041|emb|CAJ54404.1| Flagellar hook protein FlgE [Lawsonia intracellularis PHE/MN1-00] Length = 502 Score = 94.9 bits (234), Expect = 8e-18, Method: Composition-based stats. Identities = 35/175 (20%), Positives = 63/175 (36%), Gaps = 7/175 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-------KNDID 53 M S IG L TV++N++N +T+G++ +V F ++ + Sbjct: 1 MMGSLFIGATGMKTHSTGLGTVSNNIANANTIGYKQQQVVFQDLFSQDLAIGSTGSQGPN 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113 Q G G+F + D A+ G +F + + TR G F+ T DG Sbjct: 61 QAGMGAQVGSVRTIFTQGAFEPGNSVTDLAIGGKGFFQVTLEDKVHYTRAGNFRFTQDGF 120 Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 L SG + S I ++ + + + T + ++ G Sbjct: 121 LNDPSGFTLMGSRISNNPNIKKETLEPIQLDFNDPTVAKSPAKTSTALNAVVNLG 175 Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 28/82 (34%), Gaps = 5/82 (6%) Query: 162 SVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHL 216 G R N+ S + E + + LE SN + EM MI + Sbjct: 417 RFTSEDGLRREGNNHYSATLDSGGPEFGLPGTSNYGKLSVNQLETSNVDMSREMVNMIII 476 Query: 217 TQKFNSITTLIDENEKSMLEAI 238 + F + + + + +A+ Sbjct: 477 QRGFQMNSKSVTTADTMLQKAL 498 >gi|228926808|ref|ZP_04089876.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229090737|ref|ZP_04221970.1| Flagellar basal-body rod protein flgG [Bacillus cereus Rock3-42] gi|228692679|gb|EEL46405.1| Flagellar basal-body rod protein flgG [Bacillus cereus Rock3-42] gi|228832921|gb|EEM78490.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 249 Score = 94.9 bits (234), Expect = 9e-18, Method: Composition-based stats. Identities = 42/246 (17%), Positives = 83/246 (33%), Gaps = 15/246 (6%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DIDQKISFVASG 62 + QR++ ++N++N T GF+ + + +I V Sbjct: 2 GMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIGSVDYAVVPA 61 Query: 63 KEYLSKEVGSFISTGTELDFALEGDA-----WFALESPRGIILTRDGRFKVTDDGSLVSA 117 +++ G+ T + DF L+ +F LTRDG F + D L + Sbjct: 62 ATHVNLVQGNIQMTNSATDFFLDDGTAGTASFFVTSKNNETFLTRDGSFTLNSDRYLQTT 121 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV--DMSQGFVRRENS 175 SG + + + + IA + +V + + V+REN Sbjct: 122 SGAFVMGENNERIRIPEGAKVAVQADGTLYDAVTQNNIARLQTKTVGAEANNRLVQRENK 181 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 + VK LE+SN + EM ++ + ++ ++ +K Sbjct: 182 SFTLAEGNIADLPNGTGLVKNHMLENSNVDMTKEMADLMTDQRMISASQRVMTSFDKIYE 241 Query: 236 EAIRNI 241 + I Sbjct: 242 KEANEI 247 >gi|166712062|ref|ZP_02243269.1| flagellar hook protein FlgE [Xanthomonas oryzae pv. oryzicola BLS256] Length = 407 Score = 94.9 bits (234), Expect = 9e-18, Method: Composition-based stats. Identities = 29/128 (22%), Positives = 58/128 (45%), Gaps = 2/128 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--ISFVAS 61 +FN L+ A L+ ++N++N +T GF+ + +F+++ + + + S V Sbjct: 2 AFNTSLSGISAANADLNVTSNNIANVNTTGFKESRAEFADMFQSTSYGLSRNAVGSGVRV 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 G+ TG LD A+ G+ +F + S + TR G F+ +G +V+ G Sbjct: 62 SNVAQQFSQGNIDPTGRSLDLAISGEGFFTVSSNGAKMYTRAGNFQTDANGYVVNPQGAR 121 Query: 122 PVLDMASV 129 + + Sbjct: 122 LQVFAPNP 129 Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 33/92 (35%), Gaps = 5/92 (5%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSM 207 K + + L S QG + N+ + + + ++ G LE S + Sbjct: 314 KPLGQVALSSFVNPQGLQSQGNNMWAESYTSGAARTGAPNTSDLGQIESGSLESSTVDLT 373 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 ++ MI + F + + +I ++ I Sbjct: 374 EQLVNMIVAQRNFQANSQMISTQDQVTQTIIN 405 >gi|222112272|ref|YP_002554536.1| flagellar basal body flae domain-containing protein [Acidovorax ebreus TPSY] gi|221731716|gb|ACM34536.1| flagellar basal body FlaE domain protein [Acidovorax ebreus TPSY] Length = 531 Score = 94.9 bits (234), Expect = 9e-18, Method: Composition-based stats. Identities = 35/187 (18%), Positives = 70/187 (37%), Gaps = 3/187 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN--DIDQKISFVAS 61 F GL+ A + L + N++N++T GF+ + +F+ ++ + V Sbjct: 2 GFQQGLSGLNASAKNLDVIGHNIANSNTTGFKASRTEFAAMIASAIGAASGTNSGIGVEV 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLVSASGK 120 G+ TG LD A+ G+ +F L+ P G TR G FK+ + G++V+ G Sbjct: 62 SAIAQQFNQGNLTVTGNSLDVAINGNGFFTLQMPDGSRAYTRAGNFKLDNVGNVVTNDGA 121 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 + + + + + ++ + + G +P Sbjct: 122 QVMGYPIDPVTGLRTSSTAVPLTFPTTAPIPARQTTAIKTAFNLDARTPNAKGDPGATPP 181 Query: 181 IPPTPLE 187 + TP Sbjct: 182 VAATPRT 188 Score = 79.1 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 48/146 (32%), Gaps = 10/146 (6%) Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQK-----GKVIATM 158 G + VT D + V+ G + S + NV G I + + + Sbjct: 384 GSYPVTLDLNKVTQFGTKFAVSELSQDGYTSGELTGINVENNGMIMTRYSNGVTRAEGQI 443 Query: 159 GLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQM 213 L S +QG + D + ++ G LEDSN + E+ M Sbjct: 444 ALASFRNTQGLAAVGGNNWVETYESGQPVLGAPTDGNFGALRAGALEDSNVDLTAELVNM 503 Query: 214 IHLTQKFNSITTLIDENEKSMLEAIR 239 + + + + I ++ M + Sbjct: 504 MTAQRAYQANAQTIKTQDQVMSTLVN 529 >gi|167770210|ref|ZP_02442263.1| hypothetical protein ANACOL_01553 [Anaerotruncus colihominis DSM 17241] gi|167667532|gb|EDS11662.1| hypothetical protein ANACOL_01553 [Anaerotruncus colihominis DSM 17241] Length = 556 Score = 94.9 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 65/205 (31%), Gaps = 14/205 (6%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ---------- 54 G+A + +QR+ + +N++N +T GF++ +V F ++ + Sbjct: 1 MYSGVAGMKSHQQRMDVIGNNIANVNTYGFKSSRVTFRDMFYQNIRNASAGTSTRGGVSP 60 Query: 55 --KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVT-D 110 S STG LD A+ GD +F ++ G TR G + Sbjct: 61 SGVGYGSQIASIDKLMTQSSMTSTGQPLDCAITGDGFFQVQDSDGNKFYTRAGMLDIDQA 120 Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170 G LV +G + + I + V G + T+ +S Sbjct: 121 TGYLVDLNGYFVLGTQGPDVIGKAPGNSKIKVELDPLEPAAGSKVQTIQNVEYTLSATNY 180 Query: 171 RRENSGISPNIPPTPLEDLSGVTVK 195 + + + V Sbjct: 181 TTAGNVNFNFSLDNEMPTGQNIRVV 205 Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 41/120 (34%), Gaps = 5/120 (4%) Query: 125 DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT 184 + + + + + + K ++ + L + D QG + NS + Sbjct: 434 GGPQSLMNLTGIAIGADGIIRAQNAGKDIIVGRIDLANFDNPQGLDQAGNSYFTATDNSG 493 Query: 185 PLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + +K LE SN + E MI + F + + LI ++ + E I Sbjct: 494 KAKYAVPGEDGTGALKNSALEMSNVDLSQEFSDMIVTQRGFQANSRLITVSDTMLEELIN 553 >gi|120554033|ref|YP_958384.1| hypothetical protein Maqu_1105 [Marinobacter aquaeolei VT8] gi|120323882|gb|ABM18197.1| protein of unknown function DUF1078 domain protein [Marinobacter aquaeolei VT8] Length = 637 Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 34/157 (21%), Positives = 62/157 (39%), Gaps = 2/157 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA--IKNDIDQKISFVAS 61 +FN GL+ A L +N++N TVGF++ KV+F ++ + + + V Sbjct: 2 AFNTGLSGLRAASVDLDVTGNNIANASTVGFKSSKVQFGDLYASGFLSAGTNPIGDGVRV 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 S G+ T LD A+ GD +F L + I +R G+F + +G +V+ Sbjct: 62 QDVKQSFGQGNISFTDNGLDMAISGDGFFILNNGGEIRYSRAGQFGIDKEGYVVNNQNMR 121 Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158 A + + ++ + T Sbjct: 122 VQGYTADDDGNLSGIRGDLQIETDNLAPRRTTNLQTD 158 Score = 75.7 bits (184), Expect = 6e-12, Method: Composition-based stats. Identities = 21/179 (11%), Positives = 50/179 (27%), Gaps = 7/179 (3%) Query: 66 LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125 + S G + A GD + P T G+ + + Sbjct: 459 WVPKDPSGDPNGADGPPANPGDVVSPIPEPATSSAFVVNLANTTQYGAAFGVNDQQQNGY 518 Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185 + D+ K + + L + + + G ++ Sbjct: 519 TTGRLSGLDVSDQGVIFARYTNGQSKS--LGQVALAAFNNTDGLSPVGDTTWVETFESGQ 576 Query: 186 L-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + + ++K +EDSN + E+ +I + + + I+ ++ I Sbjct: 577 PVIGAPDTGTLGSIKASSVEDSNVDLSAELVNLIIAQRNYQANAKTIETSDAVTQTIIN 635 >gi|228938885|ref|ZP_04101485.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228971766|ref|ZP_04132387.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228978375|ref|ZP_04138752.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis Bt407] gi|228781392|gb|EEM29593.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis Bt407] gi|228787856|gb|EEM35814.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228820734|gb|EEM66759.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 249 Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 43/246 (17%), Positives = 81/246 (32%), Gaps = 15/246 (6%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DIDQKISFVASG 62 + QR++ ++N++N T GF+ + + +I V Sbjct: 2 GMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGVVTNIGSVDYAVVPA 61 Query: 63 KEYLSKEVGSFISTGTELDF-----ALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSA 117 +++ G+ T + DF A ++F LTRDG F + D L ++ Sbjct: 62 ATHVNLVQGNIQMTNSATDFFLDDGAAGTTSFFVTSKNDETFLTRDGSFTLNSDRYLQTS 121 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG--FVRRENS 175 SG + + + IA + +VD V+REN Sbjct: 122 SGAFVMGENNERIRIPEGAKVAVQADGTLYDEITQNNIARLQTKTVDAETNARLVQRENK 181 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 + VK LE+SN + EM ++ + + ++ +K Sbjct: 182 SFTLAEGNIANLPNGTGIVKNHMLENSNVDMTKEMADLMTDQKMIQASQRVMTSFDKIYE 241 Query: 236 EAIRNI 241 + I Sbjct: 242 KEANEI 247 >gi|220929459|ref|YP_002506368.1| hypothetical protein Ccel_2042 [Clostridium cellulolyticum H10] gi|219999787|gb|ACL76388.1| protein of unknown function DUF1078 domain protein [Clostridium cellulolyticum H10] Length = 454 Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 64/210 (30%), Gaps = 16/210 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ A + ++ + +N++N +T+GF+ +V F E+ Sbjct: 1 MMRSMFSGVSGLKAHQAKMDVIGNNVANVNTLGFKAGRVTFQEIFNQTLRGAGAPDAATA 60 Query: 54 -------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDG 104 Q +A G GS T D ++ GD +F ++ TR G Sbjct: 61 RGGTNPMQIGLGIAVGSIDNQMTGGSPQRTDNPTDLSISGDGFFIVKGSIADTFKFTRAG 120 Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 F + G+LVS G + + + Sbjct: 121 NFGLDKLGNLVSGDGMNVYGWTKYDTLGDGTVKFDTEAEITPINLYSDVTNGNKKIIAAK 180 Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVTV 194 + N + I P + TV Sbjct: 181 ATSYAEFSGNLNSALPILADPDDSDPQFTV 210 Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 18/123 (14%), Positives = 40/123 (32%), Gaps = 6/123 (4%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 +D + + + + + + + + L D G + + P Sbjct: 329 NIDGYTTGNLVTFNIGSDGMLTGVYSNGQQQPLGLIALAGFDNPAGLQKVGGNLFIPTTN 388 Query: 183 ------PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 P T+ G LE SN + E MI + F + + +I +++ + E Sbjct: 389 SGDFTKGVPAGSQGVGTLSPGTLEMSNVDLSREFTDMIVTQRGFQANSRIITTSDEMLQE 448 Query: 237 AIR 239 + Sbjct: 449 LVN 451 >gi|332703535|ref|ZP_08423623.1| flagellar hook-basal body protein [Desulfovibrio africanus str. Walvis Bay] gi|332553684|gb|EGJ50728.1| flagellar hook-basal body protein [Desulfovibrio africanus str. Walvis Bay] Length = 556 Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 44/235 (18%), Positives = 74/235 (31%), Gaps = 18/235 (7%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA---IKNDIDQKISFVA 60 S G+ A ++ + +N++N T+GF+ ++ F +V+ I Q V+ Sbjct: 6 SMFSGVTGLKAHGDKMGVIGNNIANVSTIGFKGARMFFQDVISQDIPTAAGIGQVGRGVS 65 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFAL--ESPRGIILTRDGRFKVTDDGSLVSAS 118 G Y G F +TG D A+ G +F + ++ TR G F+ DG LV + Sbjct: 66 IGAIYADYTQGGFETTGEATDLAIGGKGFFIVKKKNEDTSYYTRAGNFRFDKDGYLVDPN 125 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178 G A + I I S V ++ S Sbjct: 126 GLVLQGWRAERSDPTAAVSGVTTNTNTVRIVGTPTDIRLNNFQSPPQETTNVTVISNLDS 185 Query: 179 PN---IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 T + V G E + + + + D N Sbjct: 186 SEKSRAESTTDPFFAMFEVWDGTQETP----------LTEAQYSYQATVKVFDAN 230 Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 24/83 (28%), Gaps = 5/83 (6%) Query: 162 SVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + G R + ++ +E SN + E QMI Sbjct: 471 DFNNPWGLRREGGNLFMDTRDSGGAITNQANRGGKGSIASNSIEQSNVDMADEFVQMITT 530 Query: 217 TQKFNSITTLIDENEKSMLEAIR 239 + F + +I + + E I Sbjct: 531 QRGFQANGKVITTVDTLLGEVIN 553 >gi|255323598|ref|ZP_05364728.1| flagellar hook protein FlgE [Campylobacter showae RM3277] gi|255299312|gb|EET78599.1| flagellar hook protein FlgE [Campylobacter showae RM3277] Length = 756 Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 32/189 (16%), Positives = 61/189 (32%), Gaps = 18/189 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50 M S G+ A + + +N++N +TVG++ + F +++ Sbjct: 1 MMRSLWSGVTGLQAHQIAMDVEGNNIANVNTVGYKYNRANFDDLIYQTSRIATAPQNQHG 60 Query: 51 --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106 + + + GS +T + D AL+GD +F + S + TR+G F Sbjct: 61 GVNNMEVGLGTQINSTTRIFKQGSLQTTDKQTDIALQGDGFFMVSSDGGKTTYYTRNGDF 120 Query: 107 KVTDDGSLVSASGKYPVLD----MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162 +G+ V G +I ++ IA G Sbjct: 121 SRDSEGNFVDNGGNIVQGWMRDEETGEIDPTRPIGDIKIPVGLTVPARATTNIALKGNLD 180 Query: 163 VDMSQGFVR 171 G + Sbjct: 181 SGNDVGNKK 189 Score = 71.8 bits (174), Expect = 7e-11, Method: Composition-based stats. Identities = 15/129 (11%), Positives = 42/129 (32%), Gaps = 5/129 (3%) Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 ++S D + + + + + +A +G+ +QG + Sbjct: 626 NSSTADISQDGYASGELNGIRIDQSGTLVGSFTNGRSLGLAQVGVAKFANNQGLAGEGGN 685 Query: 176 GISPNIPPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 S + + LE SN + + Q+I + + F + + I + Sbjct: 686 LFSRTANSGDPIIGAAQTAGRGKISASSLEMSNVDLSRSLTQLIVVQRGFQANSKTITTS 745 Query: 231 EKSMLEAIR 239 ++ + ++ Sbjct: 746 DEMLNTLLQ 754 >gi|78776233|ref|YP_392548.1| flagellar hook protein FlgE [Sulfurimonas denitrificans DSM 1251] gi|78496773|gb|ABB43313.1| Flagellar hook FlgE [Sulfurimonas denitrificans DSM 1251] Length = 718 Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 29/189 (15%), Positives = 61/189 (32%), Gaps = 14/189 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G++ + + + ++N++N +TVG++ + FS+++ Sbjct: 1 MLKSLFAGVSGLQSHQVAMDVESNNIANVNTVGYKYSRANFSDLLAQTRAIATAPQGELG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGRF 106 + Q GS ++ D A++GD +F + G TR G F Sbjct: 61 GKNPVQVGLGATVSSMTRIFSQGSVQNSDKNTDVAIQGDGFFIISPDGGNTYKYTRAGDF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 K G+ V +G + + +++ Sbjct: 121 KFDAGGNFVDNNGFIVQGWLRDRATGFVDATAPITNINIPPGLTTPASPTQHVVIKANLN 180 Query: 167 QGFVRRENS 175 G + + S Sbjct: 181 SGPLVKTYS 189 Score = 67.6 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 13/120 (10%), Positives = 39/120 (32%), Gaps = 5/120 (4%) Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183 D + + + + + + +A +G+ ++G + Sbjct: 595 QDGFTGGDLVGIRIDQSGTLIGSFSNGRSFGLAQIGMAKFTNNEGLSTEGGNVYVQTANS 654 Query: 184 TPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 + T ++ LE SN + + Q+I + + + + I +++ + I Sbjct: 655 GDPIIGTAATAGRGFMQAAALEASNVDLSLALTQLIIIQRGYQANGKTITTSDQLLQTLI 714 >gi|21231397|ref|NP_637314.1| flagellar hook protein FlgE [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66768550|ref|YP_243312.1| flagellar hook protein FlgE [Xanthomonas campestris pv. campestris str. 8004] gi|188991641|ref|YP_001903651.1| flagellar hook protein FlgE [Xanthomonas campestris pv. campestris str. B100] gi|21113063|gb|AAM41238.1| flagellar biosynthesis, hook protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66573882|gb|AAY49292.1| flagellar biosynthesis, hook protein [Xanthomonas campestris pv. campestris str. 8004] gi|167733401|emb|CAP51602.1| unnamed protein product [Xanthomonas campestris pv. campestris] Length = 407 Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 29/128 (22%), Positives = 59/128 (46%), Gaps = 2/128 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--ISFVAS 61 +FN L+ A L+ ++N++N +T GF+ + +F+++ + + + S V Sbjct: 2 AFNTSLSGINAANADLNVTSNNIANVNTTGFKESRAEFADMFQSTSYGLSRNAVGSGVRV 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 G+ TG LD A+ G+ +FA+ S + TR G F+ +G +++ G Sbjct: 62 SNVAQQFSQGNIDPTGRSLDLAISGEGFFAVSSNGAKMYTRAGNFQTDANGYVINPQGAR 121 Query: 122 PVLDMASV 129 + + Sbjct: 122 LQVFAPNP 129 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 14/90 (15%), Positives = 32/90 (35%), Gaps = 5/90 (5%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYE 209 + + L S QG + N+ + + + ++ G LE S + + Sbjct: 316 LGQVALNSFVNPQGLQSQGNNMWAESYTSGAARVGAPDTSDLGQIESGSLEASTVDLTEQ 375 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + MI + F + + +I ++ I Sbjct: 376 LVNMIVAQRNFQANSQMISTQDQVTQTIIN 405 >gi|77359722|ref|YP_339297.1| flagellar hook protein FlgE [Pseudoalteromonas haloplanktis TAC125] gi|76874633|emb|CAI85854.1| flagellar biosynthesis; hook protein [Pseudoalteromonas haloplanktis TAC125] Length = 454 Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 39/167 (23%), Positives = 66/167 (39%), Gaps = 5/167 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61 SFNI L+ A ++ L+ A+N++N +T GF+ + +F++V + + + V + Sbjct: 2 SFNIALSGLAAAQKDLNVTANNIANVNTTGFKESRAEFADVYASSVFSSGKTKNGDGVQT 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESP---RGIILTRDGRFKVTDDGSLVSAS 118 GS T LD A+ G+ +FA + TR G FK+ D +V A+ Sbjct: 62 TMVAQQFHQGSLQFTNNSLDLAITGEGYFATSQDLGAQDFTYTRAGAFKLNKDNFVVDAN 121 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 G + + G AT +YS Sbjct: 122 GSFLQGFPVDPSTGDTTSVSLSTSSALQIPDSSGSPRATSSVYSSFN 168 Score = 68.7 bits (166), Expect = 6e-10, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 33/98 (33%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLED 201 + + + + SQG + ++G +I + + LE Sbjct: 355 YSNGDSTFLGQVAMVRFSNSQGLQQVGSTGWKASIASGEPIAGEPGSGTLGNINSSALEQ 414 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN N E+ +I + F + + ++ N ++ Sbjct: 415 SNVNLTNELVDLISAQRNFQANSRALEVNSTIQQSILQ 452 >gi|21242727|ref|NP_642309.1| flagellar hook protein FlgE [Xanthomonas axonopodis pv. citri str. 306] gi|294625274|ref|ZP_06703913.1| flagellar biosynthesis hook protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294664591|ref|ZP_06729932.1| flagellar biosynthesis hook protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|325927875|ref|ZP_08189099.1| flagellar hook protein FlgE [Xanthomonas perforans 91-118] gi|21108203|gb|AAM36845.1| flagellar biosynthesis hook protein [Xanthomonas axonopodis pv. citri str. 306] gi|292600448|gb|EFF44546.1| flagellar biosynthesis hook protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292605648|gb|EFF48958.1| flagellar biosynthesis hook protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|325541715|gb|EGD13233.1| flagellar hook protein FlgE [Xanthomonas perforans 91-118] Length = 407 Score = 94.2 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 29/128 (22%), Positives = 57/128 (44%), Gaps = 2/128 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--ISFVAS 61 FN L+ A L+ ++N++N +T GF+ + +F+++ + + + S V Sbjct: 2 GFNTSLSGINAANADLNVTSNNIANVNTTGFKESRAEFADMFQSTSYGLSRNAVGSGVRV 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 G+ TG LD A+ G+ +F + S + TR G F+ +G +V+ G Sbjct: 62 SNVAQQFSQGNIDPTGRSLDLAVSGEGFFTVSSNGAKMYTRAGNFQTDANGYVVNPQGAR 121 Query: 122 PVLDMASV 129 + + Sbjct: 122 LQVFAPNP 129 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 33/92 (35%), Gaps = 5/92 (5%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSM 207 K + + L S QG + N+ + + + ++ G LE S + Sbjct: 314 KPLGQVALSSFVNPQGLQSQGNNMWAESYTSGAARTGAPDTSDLGQIESGSLEASTVDLT 373 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 ++ MI + F + + +I ++ I Sbjct: 374 EQLVNMIVAQRNFQANSQMISTQDQVTQTIIN 405 >gi|153951692|ref|YP_001399003.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. doylei 269.97] gi|152939138|gb|ABS43879.1| flagellar hook protein [Campylobacter jejuni subsp. doylei 269.97] Length = 875 Score = 94.2 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 57/183 (31%), Gaps = 14/183 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G++ A + + +N+SN +T GF+ + F + Sbjct: 1 MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATTPTDGRG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106 + Q V+ GS T D A+ GD +F + LTR G F Sbjct: 61 GQNPLQIGLGVSVSSTTRIHSQGSVQITDKNTDVAINGDGFFMVSDDGGLTNYLTRSGDF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 K+ G+ V+ +G + Q +T +++ Sbjct: 121 KLDAYGNFVNNAGFVVQGWNINWDTQSIDSSRTPQNIFIDPGMHIPAAQSTEVAIKANLN 180 Query: 167 QGF 169 G Sbjct: 181 SGL 183 Score = 72.2 bits (175), Expect = 6e-11, Method: Composition-based stats. Identities = 18/144 (12%), Positives = 46/144 (31%), Gaps = 5/144 (3%) Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 T + S + +G+ + + + + K +A M + Sbjct: 729 TSGSNDGLVSSNSASTLTGQATDGYPSGNLKPEGIRVDDKGNILGEFTNGKTFAVAKMAM 788 Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIH 215 SV + G + + T +K LE SN + + ++I Sbjct: 789 ASVANNSGLEEIGGNLFKVTANSGNIVVGEAGTGGRGEMKTAALEMSNVDLSRSLTELII 848 Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239 + + + + + I +++ + I+ Sbjct: 849 IQRGYQANSKTISTSDQMLQTLIQ 872 >gi|118444200|ref|YP_877983.1| flagellar basal-body rod protein FlgG [Clostridium novyi NT] gi|118134656|gb|ABK61700.1| flagellar basal-body rod protein FlgG [Clostridium novyi NT] Length = 485 Score = 94.2 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 55/166 (33%), Gaps = 35/166 (21%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50 M S G++ + +L +N++N T GF++ +V+F +++ Sbjct: 1 MLRSMYAGISGMKVNQTKLDVTGNNIANVSTTGFKSSRVRFKDMLSQNMGEAVGPGRNQG 60 Query: 51 --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP------------- 95 + Q V G T LD A++G +F + Sbjct: 61 GVNGKQVGLGVQVAGIDTVMSQGMMQPTSRNLDVAMDGTGYFIVAKGALPESNAGGIAVS 120 Query: 96 ----------RGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPI 131 + TRDG F + G+L+++ G + + Sbjct: 121 ESEHTMSGGAFQVNYTRDGSFTLDHQGNLLTSDGYRVMGYAINEKD 166 Score = 75.7 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 30/98 (30%), Gaps = 13/98 (13%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPL-------------EDLSGVTVKRGFLED 201 + + S +G + + S + +G LE Sbjct: 385 LGQIATASFKNQEGLKKEGKNLYSNTANSGVPTVRSGLGTPKNLDNGDGYGEMLQGMLEM 444 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + + MI T+ F + +I ++ + + I Sbjct: 445 SNVDLAEQFTDMIVTTRAFQASGKMISTGDEILQDIIN 482 >gi|332140546|ref|YP_004426284.1| flagellar hook protein FlgE [Alteromonas macleodii str. 'Deep ecotype'] gi|327550568|gb|AEA97286.1| flagellar hook protein FlgE [Alteromonas macleodii str. 'Deep ecotype'] Length = 461 Score = 94.2 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 38/170 (22%), Positives = 68/170 (40%), Gaps = 5/170 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61 SFNI L+ A ++ L A+N++N +TVGF+ + +F +V A + V + Sbjct: 2 SFNIALSGVSAAQKDLDVTANNIANVNTVGFKESRAEFGDVYAASLLAGGKTKVGDGVLT 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII---LTRDGRFKVTDDGSLVSAS 118 + GS T T LD A+ G+ +FA TR G+FK+ D +V+++ Sbjct: 62 QEVAQQFSQGSLQFTNTSLDLAITGNGFFATVPEITSRDFSFTRAGQFKLDSDNFVVNSN 121 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 G + + + S + +++ G Sbjct: 122 GDNLLGFPVNADGTSASVALSTTEPVRIPDSSGSPQQTSEVDIRMNLPAG 171 Score = 63.0 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 30/93 (32%), Gaps = 5/93 (5%) Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANS 206 + I + L QG + ++ +I T + LE +N N Sbjct: 367 SEPIVRVALVRFSNEQGLTQESSTQWKESILSGEALAGEATTGTFGEINSSALEQANVNL 426 Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E+ MI + F + + ++ N + Sbjct: 427 TTELIDMIIAQRNFQANSRALEVNNSLNQTILN 459 >gi|228964756|ref|ZP_04125863.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis serovar sotto str. T04001] gi|228795006|gb|EEM42505.1| Flagellar basal-body rod protein flgG [Bacillus thuringiensis serovar sotto str. T04001] Length = 249 Score = 94.2 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 43/246 (17%), Positives = 81/246 (32%), Gaps = 15/246 (6%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DIDQKISFVASG 62 + QR++ ++N++N T GF+ + + +I V Sbjct: 2 GMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIGSVDYAVVPA 61 Query: 63 KEYLSKEVGSFISTGTELDF-----ALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSA 117 +++ G+ T + DF A ++F LTRDG F + D L ++ Sbjct: 62 ATHVNLVQGNIQMTNSATDFFLDDGAAGTTSFFVTSKNDETFLTRDGSFTLNSDRYLQTS 121 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG--FVRRENS 175 SG + + + IA + +VD V+REN Sbjct: 122 SGAFVMGENNERIRIPEGAKVAVQADGTLYDEVTQNNIARLQTKTVDAETNARLVQRENK 181 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 + VK LE+SN + EM ++ + + ++ +K Sbjct: 182 SFTLAEGNIANLPNGTGIVKNHMLENSNVDMTKEMADLMTDQKMIQASQRVMTSFDKIYE 241 Query: 236 EAIRNI 241 + I Sbjct: 242 KEANEI 247 >gi|51246516|ref|YP_066400.1| flagellar hook protein (FlgE) [Desulfotalea psychrophila LSv54] gi|50877553|emb|CAG37393.1| related to flagellar hook protein (FlgE) [Desulfotalea psychrophila LSv54] Length = 566 Score = 94.2 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 34/190 (17%), Positives = 75/190 (39%), Gaps = 5/190 (2%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI---KNDIDQKISFV 59 ++ G++ Q ++ + +N++NT+T+ ++ + FS+++ + Q V Sbjct: 5 SALYTGVSGLNTNGQAMTVIGNNLANTNTIAYKGSRTMFSDLLSSSVTGSGGTSQVGRGV 64 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRFKVTDDGSLVSA 117 + G+F ST + LD A+EG+++F L + I +R G FK + G LV+ Sbjct: 65 GLSRVDNDFSQGTFESTSSGLDLAIEGNSFFLLSPSNDQSIHYSRAGSFKFNEGGYLVNP 124 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177 G ++ D + + + + ++D + + Sbjct: 125 GGLRVQGIAYGADGELAGGDPSDIFLDGAGMIKGAATSEMIMNTNLDSNAKIFPIDFDAS 184 Query: 178 SPNIPPTPLE 187 + N E Sbjct: 185 NTNSYNFSEE 194 Score = 81.5 bits (199), Expect = 9e-14, Method: Composition-based stats. Identities = 30/219 (13%), Positives = 63/219 (28%), Gaps = 15/219 (6%) Query: 32 VGFRTIKVKFSEVVGAIKND----IDQKISFVASGKEYLSKEVGSFISTGTELD---FAL 84 FR + +++ + I + ++ + E S G LD A Sbjct: 349 TYFRKTDDNTWDTYYSLEKEDGSVIPADPNAISLTQLRFGSEGQPVDSAGLPLDGPPTAT 408 Query: 85 EGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE 144 + +T + S V + + + I + + Sbjct: 409 TEEPIDWGNGSEPTPITVTFDTTQFNSSSKVISQEQNGYGAGNLSGVNIDEGGNVIAAYS 468 Query: 145 KGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL----SGVTVKRGFLE 200 G+ + IA + L G N+ + V LE Sbjct: 469 NGK----NRNIAAISLAKFQNPAGLTMEGNNLFAATGTSGAPRVGLPGPELGKVFTNSLE 524 Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E +MI + + + + + +I ++ + E I Sbjct: 525 QSNVDMSVEFVRMITIQRGYQANSKIITTVDELLGELIN 563 >gi|206896555|ref|YP_002246691.1| flagellar hook protein FlgE [Coprothermobacter proteolyticus DSM 5265] gi|206739172|gb|ACI18250.1| flagellar hook protein FlgE [Coprothermobacter proteolyticus DSM 5265] Length = 519 Score = 94.2 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 58/144 (40%), Gaps = 12/144 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV------------GAI 48 M SF G++ + R+ +++N++N +T ++ + FS+VV G Sbjct: 1 MLRSFFNGISGLKVHQIRIDVISNNIANVNTTAYKAARATFSDVVALTLKGARAPYGGRG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 + Q V G +T D A++GD +F + + TRDG F + Sbjct: 61 GTNPSQVGLGVGLATIDNIMTQGPTNNTNRASDLAIQGDGFFVVSDGQRNWFTRDGAFDI 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQ 132 G L+ S V + +P Q Sbjct: 121 DLTGRLIQLSTGLKVQGWSMIPTQ 144 Score = 78.4 bits (191), Expect = 8e-13, Method: Composition-based stats. Identities = 28/189 (14%), Positives = 54/189 (28%), Gaps = 4/189 (2%) Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113 AS +Y+ + + D G P TR + Sbjct: 327 TVSMESASPVQYVVTFDSDGRISDVKKDGQSYGTTPTIDFDPGNGAQTRQITLNFSAITQ 386 Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRE 173 + S ++D + + + + +A + L + G R Sbjct: 387 YAADSRVVGLVDGNVNGKLLSWFVTDEGKVMGEFDNGQIRELAQIALANFQNPAGLSREG 446 Query: 174 NSGISPNIP----PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 N+ G + RG LE SN + E +I + F + T +I Sbjct: 447 NNLWQNTANSGFRGYVEAGDLGSLIIRGALESSNVDLAEEFTNLIITQRGFQASTRVITT 506 Query: 230 NEKSMLEAI 238 +++ + I Sbjct: 507 SDEVTQDII 515 >gi|218778868|ref|YP_002430186.1| hypothetical protein Dalk_1015 [Desulfatibacillum alkenivorans AK-01] gi|218760252|gb|ACL02718.1| Flagellar hook protein FlgE [Desulfatibacillum alkenivorans AK-01] Length = 693 Score = 94.2 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 34/172 (19%), Positives = 63/172 (36%), Gaps = 6/172 (3%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA---IKNDIDQKISFV 59 ++ G++ L ++ + DN++N TVGF++ +V F +V+ ++ Q Sbjct: 5 SALFSGISGMNTLGNSMTVIGDNIANVSTVGFKSSRVTFQDVLAQTVSTQSGTGQLGRGA 64 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG---IILTRDGRFKVTDDGSLVS 116 A G GS ST + D A+ G+ +F + P TR G F+ +DG+ V+ Sbjct: 65 AMGDITGIFSQGSLESTDSATDLAIGGEGFFVVRDPENVNLEYFTRAGEFRFDEDGNFVN 124 Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 SG + + + + D Sbjct: 125 PSGYLVRGWTLDQKGNEEGSIGDIILNSFTSPPEATDKVTLITNLDSDGEDN 176 Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 27/198 (13%), Positives = 49/198 (24%), Gaps = 9/198 (4%) Query: 42 SEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101 ++ A+ D IS S L A +G AW + Sbjct: 502 ADNWTALNPDNSSHISSDGYFYINPSFAEDLTSPMELNLGMAYDGTAWVQESLSTTQYAS 561 Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLY 161 G V V + + + MG Sbjct: 562 AGNTTYQATTGYGVGDLDGISVSSDGVITGSYSNGQIKPLFRIALAKFNNVQGLQKMGQN 621 Query: 162 SVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221 ++ + N T+ LE SN + E +MI + + Sbjct: 622 MFAATRNSGDAITNKPGTN---------GLGTITSNSLEQSNVDLANEFVKMITTQRGYQ 672 Query: 222 SITTLIDENEKSMLEAIR 239 + + +I ++ + E I Sbjct: 673 ANSKVITVTDQLLQEVIN 690 >gi|325921024|ref|ZP_08182906.1| flagellar hook protein FlgE [Xanthomonas gardneri ATCC 19865] gi|325548506|gb|EGD19478.1| flagellar hook protein FlgE [Xanthomonas gardneri ATCC 19865] Length = 407 Score = 94.2 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 29/128 (22%), Positives = 59/128 (46%), Gaps = 2/128 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--ISFVAS 61 +FN L+ A L+ ++N++N +T GF+ + +F+++ + + + S V Sbjct: 2 AFNTSLSGINAANADLNVTSNNIANVNTTGFKESRAEFADMFQSTSYGLSRNAVGSGVRV 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 G+ TG LD A+ G+ +FA+ S + TR G F+ +G +++ G Sbjct: 62 SNVAQQFSQGNIDPTGRSLDLAISGEGFFAVSSNGAKMYTRAGNFQTDANGYVINPQGAR 121 Query: 122 PVLDMASV 129 + + Sbjct: 122 LQVFAPNP 129 Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 14/90 (15%), Positives = 32/90 (35%), Gaps = 5/90 (5%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYE 209 + + L S QG + N+ + + + ++ G LE S + + Sbjct: 316 LGQVALSSFVNPQGLQSQGNNMWAESYTSGAARIGAPDTSDLGQIESGSLEASTVDLTEQ 375 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + MI + F + + +I ++ I Sbjct: 376 LVNMIVAQRNFQANSQMISTQDQVTQTIIN 405 >gi|256830199|ref|YP_003158927.1| hypothetical protein Dbac_2432 [Desulfomicrobium baculatum DSM 4028] gi|256579375|gb|ACU90511.1| protein of unknown function DUF1078 domain protein [Desulfomicrobium baculatum DSM 4028] Length = 562 Score = 94.2 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 5/170 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA---IKNDIDQKISFVA 60 S G + A + ++ + +N+SN T+GF+ ++ F + + + Q V+ Sbjct: 6 SLYSGTSGLKAHGEDMTVIGNNISNVSTIGFKGSRMYFEDALSQQITTASGSGQVGRGVS 65 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI--ILTRDGRFKVTDDGSLVSAS 118 G GS ST D A+ G+ +F + TR G F+ ++G LV Sbjct: 66 VGTVMGDFSQGSLESTTEATDLAIGGNGFFMVSPAGQEVNYYTRAGNFRFDEEGYLVDPR 125 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 G + G Q Sbjct: 126 GYRLQGWEVQQANTSAAASGDTTAQATTGVQILGVPQDVKLENFQSPPQA 175 Score = 71.8 bits (174), Expect = 7e-11, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 28/83 (33%), Gaps = 5/83 (6%) Query: 162 SVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + + + R + S P ++ LE SN + E +MI Sbjct: 477 TFNNNYALYREGGNLFSETRSSGPPITGLANTGGKGSIASNSLEQSNVDLATEFVKMITT 536 Query: 217 TQKFNSITTLIDENEKSMLEAIR 239 + F + + I ++ + I+ Sbjct: 537 EKGFQANSKTITTVDQMLTVLIQ 559 >gi|218885350|ref|YP_002434671.1| hypothetical protein DvMF_0246 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756304|gb|ACL07203.1| protein of unknown function DUF1078 domain protein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 545 Score = 94.2 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 30/128 (23%), Positives = 56/128 (43%), Gaps = 5/128 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA---IKNDIDQKISFVA 60 S G++ LA ++++ + +N++N +TVGF+ ++ F + + + Q V+ Sbjct: 6 SMWTGVSGLLAHGEKMNVLGNNIANVNTVGFKGSRMDFQDFINQDVYSAVGVSQVGRGVS 65 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI--ILTRDGRFKVTDDGSLVSAS 118 G + G+F +T D A+ G +F + TR G F+ +DG LV Sbjct: 66 IGAIFGDFSQGAFETTNEATDLAIGGKGFFQVRPKGQETSYYTRAGNFRFDNDGYLVDPH 125 Query: 119 GKYPVLDM 126 G Sbjct: 126 GYVLQGWE 133 Score = 81.8 bits (200), Expect = 7e-14, Method: Composition-based stats. Identities = 33/245 (13%), Positives = 62/245 (25%), Gaps = 22/245 (8%) Query: 6 NIGLAAQLALEQRLS-----TVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 + + ++ T ++N G+ F + N + Sbjct: 309 FTIASGATGNLKDMNNWVPTTFSNN-------GY----PLFVANFSGVANASYTSPTVPT 357 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + YL + + A A + L G + T S +S Sbjct: 358 EAEPYLMELNFGLRNLSNSWGSAPASAAAIGSNAGNLGGLGAQGERQSTAMTSYGGSSSM 417 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-IATMGLYSVDMSQGFVRRENSGISP 179 + + G S + + + LY R + S Sbjct: 418 IFQKQDGYTFGFLQNITVDQDGVVHGRYSNGVILDLYQITLYDFTSPTNLRREGGNLFSE 477 Query: 180 N-----IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 P +V LE SN + E QMI + F S + +I + + Sbjct: 478 TRASGDALAGPANANGYGSVNSNSLEQSNVDLAREFVQMITTQRGFQSNSKVITTTDTML 537 Query: 235 LEAIR 239 + Sbjct: 538 ETVVN 542 >gi|254473478|ref|ZP_05086875.1| flagellar hook protein FlgE [Pseudovibrio sp. JE062] gi|211957594|gb|EEA92797.1| flagellar hook protein FlgE [Pseudovibrio sp. JE062] Length = 397 Score = 94.2 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 43/202 (21%), Positives = 81/202 (40%), Gaps = 4/202 (1%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 N ++ A +LSTVADN+SN +TVG++ K FS +VG+ + V + Sbjct: 7 MNTSVSGMNAQSNKLSTVADNISNANTVGYKRYKTAFSSLVGS-GGTSGHESGIVNTTVV 65 Query: 65 YLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYPV 123 ++ G+F T D A+ G +F ++ + TR G F + +G +V++ G Y + Sbjct: 66 QTVRQQGAFNFTSRGTDLAINGKGFFQVQDSQGSTYYTRAGDFVLDKNGQMVNS-GGYKL 124 Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183 L P+ + ++ +GE+ + + F + + Sbjct: 125 LSAGGAPVTVDLNTPVWQASSEGELGVNLASSTPVRTGAPSYPGNFDYKTSVSAYDQNGN 184 Query: 184 TPLEDLSGVTVKRGFLEDSNAN 205 DL + + S + Sbjct: 185 VVKIDLVYSKIGQNMT-GSTVD 205 Score = 81.8 bits (200), Expect = 7e-14, Method: Composition-based stats. Identities = 25/210 (11%), Positives = 64/210 (30%), Gaps = 11/210 (5%) Query: 43 EVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT- 101 ++V + + S + + + +D +GD SP + T Sbjct: 189 DLVYSKIGQNMTGSTVDDSTWKVQAYNQDTPPVELANVDLVFDGDGTLQTGSPDELAFTV 248 Query: 102 RDGRFKVTDDGSLVSASG----KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157 +G D V+A +D + E K++ Sbjct: 249 PNGETLTLDLSKTVTAGDKFSVNKVDVDGYGPSTIKTIRIEADGRVFGVYEGSAEKLLDQ 308 Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQ 212 + + + G + + + ++ G +E SN + E+ + Sbjct: 309 IQIVNFSNPDGLQAKSGNVYAATDASGDPAVGFPGDNGFGSLYSGAVEGSNVDLAAELTE 368 Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 M+ + +++ T + + + + + E N+ Sbjct: 369 MVQAQRTYSANTKVFNASSELLQEL-NNLR 397 >gi|188576756|ref|YP_001913685.1| flagellar hook protein FlgE [Xanthomonas oryzae pv. oryzae PXO99A] gi|188576947|ref|YP_001913876.1| flagellar hook protein FlgE [Xanthomonas oryzae pv. oryzae PXO99A] gi|188521208|gb|ACD59153.1| flagellar biosynthesis hook protein [Xanthomonas oryzae pv. oryzae PXO99A] gi|188521399|gb|ACD59344.1| flagellar biosynthesis hook protein [Xanthomonas oryzae pv. oryzae PXO99A] Length = 407 Score = 94.2 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 29/128 (22%), Positives = 58/128 (45%), Gaps = 2/128 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--ISFVAS 61 +FN L+ A L+ ++N++N +T GF+ + +F+++ + + + S V Sbjct: 2 AFNTSLSGISAANADLNVTSNNIANVNTTGFKESRAEFADMFQSTSYGLSRNAVGSGVRV 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 G+ TG LD A+ G+ +F + S + TR G F+ +G +V+ G Sbjct: 62 SNVAQQFSQGNIDPTGRSLDLAVSGEGFFTVSSNGAKMYTRAGNFQTDANGYVVNPQGAR 121 Query: 122 PVLDMASV 129 + + Sbjct: 122 LQVFAPNP 129 Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 33/92 (35%), Gaps = 5/92 (5%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSNANSM 207 K + + L S QG + N+ + + + ++ G LE S + Sbjct: 314 KPLGQVALSSFVNPQGLQSQGNNVWAESYTSGAARTSAPNTSDLGQIESGSLESSTVDLT 373 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 ++ MI + F + + +I ++ I Sbjct: 374 EQLVNMIVAQRNFQANSQMISTQDQVTQTIIN 405 >gi|163783988|ref|ZP_02178953.1| flagellar hook protein FlgE [Hydrogenivirga sp. 128-5-R1-1] gi|159880748|gb|EDP74287.1| flagellar hook protein FlgE [Hydrogenivirga sp. 128-5-R1-1] Length = 327 Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 36/188 (19%), Positives = 71/188 (37%), Gaps = 8/188 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M SF G A A ++ LS ++DN++N +T+GF+ + F +++ + Sbjct: 1 MIQSFYTGNAGLNANQKWLSVISDNIANVNTIGFKAERANFEDLIASSITSFANNAPKNM 60 Query: 56 --ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDG 112 G G+ +T D AL+G+ +F ++ +G TR G+F+ +G Sbjct: 61 EIGGGSFIGSTTKDFSQGALKNTNIATDLALDGEGFFMVQDKQGVTYYTRAGQFRTDANG 120 Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172 L++ +G Y I N+ + K+ S + Sbjct: 121 DLINLNGMYLQGWSLDANGNISGSIGKINIPNAMDPHVTSKLALKSPTNLNASSPLITKT 180 Query: 173 ENSGISPN 180 ++ + Sbjct: 181 LDTSDATT 188 >gi|332994162|gb|AEF04217.1| flagellar hook protein FlgE [Alteromonas sp. SN2] Length = 458 Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 40/184 (21%), Positives = 71/184 (38%), Gaps = 5/184 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61 SFNI L+ A ++ L A+N++N +TVGF+ + +F +V + V + Sbjct: 2 SFNIALSGVAAAQKDLDVTANNIANVNTVGFKESRAEFGDVYATSLLAGSKTKVGDGVLT 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII---LTRDGRFKVTDDGSLVSAS 118 GS T T LD A+ G+ +FA TR G+FK+ DD +V+++ Sbjct: 62 QDVAQQFSQGSLQFTNTALDLAITGNGFFATVPDETSRDFSFTRAGQFKLDDDNYVVNSN 121 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178 G + + + S + +++ G + + Sbjct: 122 GDLLLGFPVNSDSTSSSVALSTTEPVQIPDSSGSPAQTSEVDIRMNLPAGDQGLDPAAFD 181 Query: 179 PNIP 182 P P Sbjct: 182 PQDP 185 Score = 64.1 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 31/93 (33%), Gaps = 5/93 (5%) Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANS 206 + I + L QG ++ ++ +I T + LE +N N Sbjct: 364 SEPIVRVALVRFANEQGLTQQSSTEWKESILSGEALAGEATTGTFGEINSSALEQANVNL 423 Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E+ MI + F + + ++ N + Sbjct: 424 TTELIDMIIAQRNFQANSRALEVNNSLNQTILN 456 >gi|152985192|ref|YP_001349650.1| flagellar hook protein FlgE [Pseudomonas aeruginosa PA7] gi|150960350|gb|ABR82375.1| flagellar hook protein [Pseudomonas aeruginosa PA7] Length = 462 Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 35/134 (26%), Positives = 59/134 (44%), Gaps = 2/134 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61 SFNIGL+ A L+ +N++N TVGF+ + +F++V A + + + S V Sbjct: 2 SFNIGLSGIQAASSGLNVTGNNIANAGTVGFKQSRAEFADVYAASVLGSGSNPQGSGVLL 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 + G+F +T + LD A+ G+ +F + I TR G F +V +G Sbjct: 62 SDISQMFKQGNFETTNSVLDLAINGNGFFVTSNNGAISYTRAGYFNTDKQDFIVDNNGYR 121 Query: 122 PVLDMASVPIQIPQ 135 Q+ Sbjct: 122 LQGYAVGPNGQLQN 135 Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 30/98 (30%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLED 201 + + KV + L + QG + + + ++ G LE Sbjct: 363 YTNGQSKVQGQVVLANFANIQGLTPIGKTSWVQSSESGEPAVGAPRSGTLGALQSGALEA 422 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ +I + + + I + I Sbjct: 423 SNVDISSELVNLIVHQRNYQANAKTIQTEDAVTQTIIN 460 >gi|90021855|ref|YP_527682.1| ribonuclease III [Saccharophagus degradans 2-40] gi|89951455|gb|ABD81470.1| flagellar basal body FlaE [Saccharophagus degradans 2-40] Length = 804 Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 32/153 (20%), Positives = 59/153 (38%), Gaps = 2/153 (1%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASG 62 F+ L+ A LS +N++N T GF+ + +F +V ++ S V Sbjct: 3 FDTALSGIRAASSDLSVTGNNIANASTTGFKASRAEFGDVYATSVLGAGVNAIGSGVQVQ 62 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 + G+ T ELD A+ G+ +F + + TR G F + D+G +V+ +G Sbjct: 63 EVAQRFSQGNVGFTENELDLAINGNGFFVVSQQGETLYTRAGSFGLDDEGYVVNNTGAVL 122 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI 155 A I + ++ + Sbjct: 123 QGFSADGAGNIGGIQGDIRIQTSNLAPRQTTGV 155 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 14/90 (15%), Positives = 30/90 (33%), Gaps = 5/90 (5%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYE 209 + + L QG N+ + + + V+ G LE+SN + + Sbjct: 713 LGQVVLADFSNQQGLQPTGNTMWAETFESGSPNVGTPGSAALGAVQAGALEESNVDLSEQ 772 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + +I + F + I+ + I Sbjct: 773 LVNLIIAQRNFQASAKTIETADAVTQTIIN 802 >gi|311070150|ref|YP_003975073.1| flagellar basal body rod protein FlgG [Bacillus atrophaeus 1942] gi|310870667|gb|ADP34142.1| flagellar basal body rod protein FlgG [Bacillus atrophaeus 1942] Length = 274 Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 51/275 (18%), Positives = 100/275 (36%), Gaps = 34/275 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M S L+Q++ T++ N+SN+ T G++ FSE+V + +D+K VA Sbjct: 1 MLRSMLTASTTLNQLQQQIDTISSNLSNSSTTGYKAKNTNFSELVRQQFDQVDEKNDNVA 60 Query: 61 SGKEYLS---------------KEVGSFISTGTELDFALEGDA-WFALESPRGIILTRDG 104 ++ + GS T +LD A + + TRDG Sbjct: 61 KARKTPPGLRLGVGAAMNARLVSDQGSIEKTERDLDIAFTSPYQYLQVNVNGNRQYTRDG 120 Query: 105 RFKV-----TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA--- 156 + D+ + YPVLD PI I + + E G ++ Sbjct: 121 ALYLTPAAGNDNQLQLVTGDGYPVLDENGNPINIDDSMKQITISENGTLTASTGNAGDAS 180 Query: 157 ---TMGLYSVDMSQGFVRRENSGI------SPNIPPTPLEDLSGVTVKRGFLEDSNANSM 207 +G+ V+ Q N+ + + + + +++G LE SN + Sbjct: 181 QQFNLGVVQVNNPQELKSEGNNLFSLNGNAAAALEELNGANRQSIGIQQGALEMSNVDIS 240 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 +M +I + + + I ++ + + ++ Sbjct: 241 KQMTDLISSQRSYQLNSRTITMGDQMLG-LVNSVR 274 >gi|109899402|ref|YP_662657.1| flagellar hook protein FlgE [Pseudoalteromonas atlantica T6c] gi|109701683|gb|ABG41603.1| flagellar basal body FlaE [Pseudoalteromonas atlantica T6c] Length = 458 Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 38/184 (20%), Positives = 72/184 (39%), Gaps = 5/184 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61 SFNI L+ A ++ L T A+N++N +TVGF+ + +F +V + + V + Sbjct: 2 SFNIALSGVSAAQRDLDTTANNIANVNTVGFKESRAEFGDVYASSLLAGGKTKVGDGVIT 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII---LTRDGRFKVTDDGSLVSAS 118 + GS T LD A+ G+ +FA TR G FK+ + +V+++ Sbjct: 62 QEVAQQFSQGSLQFTNNSLDLAVTGNGFFATIPEIDSREFSFTRAGMFKLDAENFVVNSN 121 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178 G + + + S + +++ G + + Sbjct: 122 GDNLLGFPVNPDGTSSSVALSTTQAVRIPDSSGSPQPTSEVSLKMNLPAGDDAVDLDLFN 181 Query: 179 PNIP 182 P+ P Sbjct: 182 PDDP 185 Score = 65.7 bits (158), Expect = 6e-09, Method: Composition-based stats. Identities = 26/198 (13%), Positives = 52/198 (26%), Gaps = 10/198 (5%) Query: 52 IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDD 111 + ++ G+ +TG AL G P I T Sbjct: 259 GYRMTFSAGGDFTSIANADGTSSATGDITSVALGGTILANGSDPSQTITTNFAFDPGNAT 318 Query: 112 GSLVSASGK-----YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 + D +V + + + I + L Sbjct: 319 PDEPTQFASAFEVTSLEQDGLAVGRLTGIDIGADGLVRATYSNGTSEPIIRVALVRFAND 378 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFN 221 QG ++ N+ +I T + LE +N N E+ +I + F Sbjct: 379 QGLTQQSNTQWQESILSGEALAGEATTGTFGDINSSALEQANVNLTTELIDLIIAQRNFQ 438 Query: 222 SITTLIDENEKSMLEAIR 239 + + ++ N + + Sbjct: 439 ANSRALEVNNQLNQTILN 456 >gi|78047586|ref|YP_363761.1| flagellar hook protein FlgE [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78036016|emb|CAJ23707.1| flagellar hook protein FlgE [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 407 Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 29/128 (22%), Positives = 57/128 (44%), Gaps = 2/128 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--ISFVAS 61 FN L+ A L+ ++N++N +T GF+ + +F+++ + + + S V Sbjct: 2 GFNTSLSGINAANADLNVTSNNIANVNTTGFKESRAEFADMFQSTSYGLSRNAVGSGVRV 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 G+ TG LD A+ G+ +F + S + TR G F+ +G +V+ G Sbjct: 62 SNVAQQFSQGNIDPTGRSLDLAVSGEGFFTVWSNGAKMYTRAGNFQTDANGYVVNPQGAR 121 Query: 122 PVLDMASV 129 + + Sbjct: 122 LQVFAPNP 129 Score = 74.9 bits (182), Expect = 9e-12, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 33/92 (35%), Gaps = 5/92 (5%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSM 207 K + + L S QG + N+ + + + ++ G LE S + Sbjct: 314 KPLGQVALSSFVNPQGLQSQGNNMWAESYTSGAARTGAPDTSDLGQIESGSLEASTVDLT 373 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 ++ MI + F + + +I ++ I Sbjct: 374 EQLVNMIVAQRNFQANSQMISTQDQVTQTIIN 405 >gi|289208114|ref|YP_003460180.1| fagellar hook-basal body protein [Thioalkalivibrio sp. K90mix] gi|288943745|gb|ADC71444.1| fagellar hook-basal body protein [Thioalkalivibrio sp. K90mix] Length = 408 Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 43/192 (22%), Positives = 73/192 (38%), Gaps = 2/192 (1%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS--G 62 FNIGL+ + + L T +N+SN T GF+ + +F +V + Q + S Sbjct: 3 FNIGLSGLNSAQADLQTTGNNVSNAGTTGFKRSRAEFGDVFAQSFGGVSQTATGGGSRLM 62 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G T LD A++G+ +F + + TR G F+V DG+LV+ G+ Sbjct: 63 AVTQQFSQGRTEFTENGLDLAIDGEGFFVMNDGGNRVYTRAGEFQVNRDGNLVNNQGQQL 122 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 P +G+ + AT + ++ Q + G Sbjct: 123 QGYPPINPGSTDTDFNTGQLGDLRLQTGASAPQATSDIEALVNLQSDAPILDPGEFEFDD 182 Query: 183 PTPLEDLSGVTV 194 P + +TV Sbjct: 183 PDSYNYSTSLTV 194 Score = 82.6 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 23/166 (13%), Positives = 51/166 (30%), Gaps = 12/166 (7%) Query: 84 LEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVG 143 L+G+ F + + G+ + G ++ + ++ Sbjct: 243 LDGNTEFPFSTDDFTNGAEGLDGTIDFAGT--TQFGGDFAVNDLGQDGFASGRLTGVDID 300 Query: 144 EKG-----EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT----- 193 G + + V+ + L + QG + N+ + S T Sbjct: 301 SSGVVFARFTNGQSSVLGQVALANFTNPQGLEQLGNNNWAETFAAGDPVFASPGTGNLGE 360 Query: 194 VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 ++ G LE SN + E+ +I + F + I ++ I Sbjct: 361 IQAGALEASNVDIAQELVNLITAQRNFQANAQTISTADQVTQTIIN 406 >gi|332305615|ref|YP_004433466.1| flagellar hook-basal body protein [Glaciecola agarilytica 4H-3-7+YE-5] gi|332172944|gb|AEE22198.1| flagellar hook-basal body protein [Glaciecola agarilytica 4H-3-7+YE-5] Length = 460 Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 38/184 (20%), Positives = 70/184 (38%), Gaps = 5/184 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61 SFNI L+ A ++ L T A+N++N +TVGF+ + +F +V + + V + Sbjct: 2 SFNIALSGVSAAQRDLDTTANNIANVNTVGFKESRAEFGDVYASSLLAGGKTKVGDGVIT 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII---LTRDGRFKVTDDGSLVSAS 118 + GS T LD A+ G+ +FA TR G FK+ + +V+++ Sbjct: 62 QEVAQQFSQGSLQFTNNSLDLAVTGNGFFATIPEIDSREFSFTRAGMFKLDAENFVVNSN 121 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178 G + + + S + +++ G Sbjct: 122 GDNLLGFPVNPDGTSSSVALSTTQPVRIPDSSGSPQPTSEVSLKMNLPAGDDAVNLDLFD 181 Query: 179 PNIP 182 P+ P Sbjct: 182 PSDP 185 Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 26/198 (13%), Positives = 51/198 (25%), Gaps = 10/198 (5%) Query: 52 IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDD 111 + + G+ TG + AL G P I T Sbjct: 261 GYRMTFSAGGDFTEIQNADGTPSPTGDIMSVALGGTILANGSDPSQTISTNFAFDPNVAT 320 Query: 112 GSLVSASGK-----YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 + D +V + + + I + L Sbjct: 321 ADEPTQFASAFEVTSLEQDGLAVGRLTGIDIGADGLVRATYSNGTSEPIIRVALVRFAND 380 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFN 221 QG ++ N+ +I T + LE +N N E+ +I + F Sbjct: 381 QGLTQQSNTQWQESILSGEALAGEATTGTFGDINSSALEQANVNLTTELIDLIIAQRNFQ 440 Query: 222 SITTLIDENEKSMLEAIR 239 + + ++ N + + Sbjct: 441 ANSRALEVNNQLNQTILN 458 >gi|157165263|ref|YP_001467845.1| flagellar hook protein FlgE [Campylobacter concisus 13826] gi|112801725|gb|EAT99069.1| flagellar hook protein FlgE [Campylobacter concisus 13826] Length = 814 Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 28/145 (19%), Positives = 52/145 (35%), Gaps = 14/145 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50 M S G++ A + + +N++N +T GF+ + F++++ Sbjct: 1 MMRSLWSGVSGLQAHQIAMDVEGNNIANVNTYGFKYNRANFADILSQTPRVATAPQGQLG 60 Query: 51 --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI--ILTRDGRF 106 + Q G+ ST + D AL+G+ +F + G TR+G F Sbjct: 61 GQNAMQIGLGTTINSTTRIFSQGTLTSTDKQTDLALQGNGFFVVSPDGGTTRYYTRNGDF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPI 131 G+ V+ SG Sbjct: 121 VRDKAGNFVNNSGYIVQGWTRDDET 145 Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 16/129 (12%), Positives = 42/129 (32%), Gaps = 5/129 (3%) Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 +S + D + K + + + +A + L S ++G + Sbjct: 683 DSSTESISQDGYTGGTLNDLKIDETGTIIGAFTNGQSFGLAQVALASFTNNEGLQSEGGN 742 Query: 176 GISPNIPPTPLEDLS-----GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 S + T+ LE SN + + +I + + F + + I + Sbjct: 743 VFSQTANSGEAVIGAAGTGDKGTIAASKLEASNVDLSRALTDLIVIQRGFQANSKTITTS 802 Query: 231 EKSMLEAIR 239 ++ + ++ Sbjct: 803 DEMLNTLLQ 811 >gi|94987008|ref|YP_594941.1| flagellar hook protein FlgE [Lawsonia intracellularis PHE/MN1-00] gi|94731257|emb|CAJ54620.1| Flagellar hook protein FlgE [Lawsonia intracellularis PHE/MN1-00] Length = 690 Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 30/127 (23%), Positives = 56/127 (44%), Gaps = 5/127 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK---NDIDQKISFVA 60 G++ L+ ++++ + +N++N +TVGF+ ++ F++ + I Q V Sbjct: 6 GMWTGVSGLLSHGEKMNVIGNNIANVNTVGFKGQRMDFADFIYQDGFSTAGITQIGRGVG 65 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI--ILTRDGRFKVTDDGSLVSAS 118 G + GSF +T D A+ G +F ++ TR G F+ +DG LV Sbjct: 66 IGAVMGNFGQGSFETTTEATDLAIGGRGFFKVKPQGSETSYYTRAGNFRFNNDGYLVDPH 125 Query: 119 GKYPVLD 125 G Sbjct: 126 GYALQGW 132 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 16/121 (13%), Positives = 34/121 (28%), Gaps = 5/121 (4%) Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183 + + V + + + LY + QG R + S Sbjct: 567 QNGYGFGDLMNYSVNAEGVLFGVYSNGVQLPLYQVALYDFNSKQGLRREGGNLFSQTRES 626 Query: 184 TPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 ++ LE SN + E MI + F S + ++ ++ + + Sbjct: 627 GDPSSGAANTSGFGSINANTLEGSNVDISTEFVSMIATQRGFQSNSKIVTTIDQMLETVV 686 Query: 239 R 239 Sbjct: 687 N 687 >gi|154174192|ref|YP_001407320.1| flagellar hook protein FlgE [Campylobacter curvus 525.92] gi|112803531|gb|EAU00875.1| flagellar hook protein FlgE [Campylobacter curvus 525.92] Length = 819 Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 27/145 (18%), Positives = 52/145 (35%), Gaps = 14/145 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50 M S G++ A + + +N++N +T G++ + F++++ Sbjct: 1 MMRSLWSGVSGLQAHQIAMDVEGNNIANVNTYGYKYNRANFADILSQTPRVATAPQGELG 60 Query: 51 --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI--ILTRDGRF 106 + Q G+ ST + D AL+G+ +F + G TR+G F Sbjct: 61 GQNPMQIGLGTTINSTTRIFSQGTLTSTDKQTDLALQGNGFFIVSPDGGTTRYYTRNGDF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPI 131 G+ V+ SG Sbjct: 121 VRDKAGNFVNNSGHIVQGWTRDEET 145 Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 14/94 (14%), Positives = 34/94 (36%), Gaps = 5/94 (5%) Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS-----GVTVKRGFLEDSNAN 205 K +A + L + ++G + S + TV LE SN + Sbjct: 723 KSFGLAQVALATFTNNEGLQSEGGNVFSQTANSGEAVIGAAGTGDKGTVAASKLEASNVD 782 Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + +I + + F + + I +++ + ++ Sbjct: 783 LSRALTDLIVIQRGFQANSKTITTSDEMLNTLLQ 816 >gi|23010476|ref|ZP_00051152.1| COG4786: Flagellar basal body rod protein [Magnetospirillum magnetotacticum MS-1] Length = 160 Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 34/158 (21%), Positives = 69/158 (43%), Gaps = 4/158 (2%) Query: 85 EGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE 144 A+++P+G TR+G F++ G+LV++ G D PI I Q++ ++ Sbjct: 4 CAGRVLAVQTPQGPRYTRNGAFELDPQGNLVTSDGYAVQGD--GGPITIGQQETGLSIAP 61 Query: 145 KGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNA 204 G +S + + + + Q + S P P ++ G LE SN Sbjct: 62 DGTVSTNLGIRGRLRIVTFANPQALQSEGANLFSSQAPARPAGPGQH--LEPGALERSNV 119 Query: 205 NSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 + EM +++ + + + ++++I + AIR +A Sbjct: 120 KPVVEMTRLMDVNRTYAMVSSVISRLDDLRGTAIRRLA 157 >gi|303326311|ref|ZP_07356754.1| flagellar hook protein FlgE [Desulfovibrio sp. 3_1_syn3] gi|302864227|gb|EFL87158.1| flagellar hook protein FlgE [Desulfovibrio sp. 3_1_syn3] Length = 503 Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 27/169 (15%), Positives = 59/169 (34%), Gaps = 14/169 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--------- 51 M ++ IG L Q + +N++N T+G++ FS+++ + Sbjct: 1 MNSALYIGATGMKGLSQGMQVTTNNLANVSTIGYKQQNTLFSDMLSTSQGGTGDWWNAQE 60 Query: 52 -----IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106 + Q V + G+ +T T D A+ G +F + + TR G F Sbjct: 61 NSRVALGQTGKGVQVDAVRTIFQQGALEATNTVTDMAINGKGFFQVSDGANLYYTRAGDF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI 155 + ++G + +G + + E+ ++ + Sbjct: 121 RPDNEGVWRTPTGLALNGYQYNTDGSLGGLQEVKIDRFGTMPAKSTARV 169 Score = 76.1 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 38/96 (39%), Gaps = 5/96 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLED 201 + +G+ + + + G R ++ S +E + TV +E+ Sbjct: 403 YSNGQGQNLWQIPVCRFTSEDGLRREGSNLFSATEEAGQMEMGVAGTENYGTVNAYNVEN 462 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 SN + EM MI + F S + ++ ++ + +A Sbjct: 463 SNVDMATEMVNMIITQRGFQSNSKVVTTADQMLQKA 498 >gi|301168104|emb|CBW27690.1| putative flagellar hook protein [Bacteriovorax marinus SJ] Length = 426 Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 39/158 (24%), Positives = 68/158 (43%), Gaps = 3/158 (1%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI---KNDIDQKISF 58 SFNIG+ A+ Q + + DN++N T GF++ + +F +V+ + DQ + Sbjct: 4 LRSFNIGVTGLNAVGQGMGVIGDNIANAGTNGFKSSRAEFQDVLATSLKGIDGGDQFGAG 63 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSAS 118 G T D A+ GD +F + +P G TRDG F +G LV++ Sbjct: 64 TKLAHIKTLMTQGDVARTDNITDLAVNGDGFFKVNAPFGKGFTRDGSFHFNKEGELVNSD 123 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156 G + A +I K+ +G ++ + + Sbjct: 124 GYQVIGFEADETGKITNKEAPVKLGSTTIPAKASEKVN 161 Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 10/124 (8%), Positives = 36/124 (29%), Gaps = 5/124 (4%) Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 D S + + + + I+ + + + ++G + + + + Sbjct: 300 RHSQDGFSAATLASMSFNDAGILTAVYDNGESRDISQIAVAKFENNEGLFKVGKNLMKES 359 Query: 181 IPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 V +E SN + E ++ + F + + ++ + Sbjct: 360 RNSGEAAMGKPGESGRGEVLSKSIELSNVDIANEFVGLMTAQRNFQANAKTLTTADEMLQ 419 Query: 236 EAIR 239 + + Sbjct: 420 QVLN 423 >gi|238916755|ref|YP_002930272.1| flagellar hook protein FlgE [Eubacterium eligens ATCC 27750] gi|238872115|gb|ACR71825.1| flagellar hook protein FlgE [Eubacterium eligens ATCC 27750] Length = 464 Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 15/141 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S ++ A + R+ + +N++N +TV F++ + FSEV Sbjct: 24 MMRSMYSAVSGLKAHQTRMDVIGNNIANVNTVAFKSQSMTFSEVFYQTTQTASGPNAESG 83 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFIS---TGTELDFALEGDAWFALESPRGIILTRDGR 105 K + K + S +S + + + T D + G A+F + S TR G Sbjct: 84 KGGTNAKQIGLGSSVGSISTSISTEGASERTDNAFDLKIGGSAFFIVNSAGNTFFTRAGN 143 Query: 106 FKVTDDGSLVSASGKYPVLDM 126 FKV + G+LV+++G + Sbjct: 144 FKVDESGALVTSAGANVMGWQ 164 Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 36/99 (36%), Gaps = 6/99 (6%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE------DLSGVTVKRGFLE 200 + K I + + + +G + + S + + S ++ G LE Sbjct: 363 YSNGDTKNIGQIAVATFSNPEGLQKEGENLYSATLNSGSFDGIGEDVTTSDGSISSGVLE 422 Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E MI + + + + +I ++ + E I Sbjct: 423 MSNVDLSSEFTNMITTQRGYQANSRIITVSDTLLEELIN 461 >gi|327480020|gb|AEA83330.1| flagellar basal body FlaE domain-containing protein [Pseudomonas stutzeri DSM 4166] Length = 558 Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 2/134 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61 SFNIGL+ A + L+ +N++N TVGF+ + +FS+V A + + S V Sbjct: 2 SFNIGLSGLRAASKDLNVTGNNIANAGTVGFKQSRAEFSDVYAASVLGTGKNPQGSGVLM 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 G+ T LD A+ G+ +F + + + TR G F +G LV G Sbjct: 62 SNISQQFNQGNINYTQNALDLAINGNGFFQVSNNGAVSYTRAGYFGTDREGFLVDNFGYK 121 Query: 122 PVLDMASVPIQIPQ 135 + Sbjct: 122 LQGFPVDNNGNLQN 135 Score = 66.8 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 19/140 (13%), Positives = 42/140 (30%), Gaps = 9/140 (6%) Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 V++ + ++I IF G+ +G++I L + Sbjct: 421 NATQYASAFAVNSVAQDGYTTGELAGLEIDDTGVIFARYTNGQSKVQGQII----LANFA 476 Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQK 219 QG + + + + ++ G LEDSN ++ +I + Sbjct: 477 NVQGLTPVGKTQWVQSFESGEPVVGTPGSGTLGALQAGALEDSNVELSDQLVNLIVAQRN 536 Query: 220 FNSITTLIDENEKSMLEAIR 239 + + I+ I Sbjct: 537 YQANAKTIETESAITQTIIN 556 >gi|319764539|ref|YP_004128476.1| flagellar hook-basal body protein [Alicycliphilus denitrificans BC] gi|330826755|ref|YP_004390058.1| flagellar hook-basal body protein [Alicycliphilus denitrificans K601] gi|317119100|gb|ADV01589.1| flagellar hook-basal body protein [Alicycliphilus denitrificans BC] gi|329312127|gb|AEB86542.1| flagellar hook-basal body protein [Alicycliphilus denitrificans K601] Length = 426 Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 40/193 (20%), Positives = 69/193 (35%), Gaps = 8/193 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN--DIDQKISFVAS 61 F GL+ A + L + N++N++TVGF+ + +F+ +V V Sbjct: 2 GFQQGLSGLNASSKNLDVIGHNIANSNTVGFKASRTEFASMVATAIGTASTGNAGIGVQV 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGK 120 G G+ TG LD A+ G+ +F ++ P G TR G FK+ D G++++ +G Sbjct: 62 GAVAQQFTQGNITVTGNNLDVAINGNGFFKIQQPDGSFAYTRAGNFKLDDKGNVITNNGG 121 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 + Q + G I S+ + R Sbjct: 122 KVMGYPMDPITQTRTASTPQPLVFP-----TGAPIPAKQTTSIKATFNLDARAPDAAGNP 176 Query: 181 IPPTPLEDLSGVT 193 P+ T Sbjct: 177 SATPPIAATPRST 189 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 27/205 (13%), Positives = 56/205 (27%), Gaps = 11/205 (5%) Query: 45 VGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDG 104 V +D + VA+ ++ + I+ A G +P Sbjct: 221 VYDRLDDPNATPPVVATPIGQITFDNNGQITGPAATPPA-TGFQLPITIAPPTPNPNNLP 279 Query: 105 RFKVTDDGSLVSASG-----KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG 159 + V + V+ G D + + + + Sbjct: 280 AYTVQVNLDGVTQFGAKFAVSDLTQDGYTAGQLTGINIGDDGTIMTSYSNGVTRAEGQIA 339 Query: 160 LYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMI 214 L S +QG N+ + ++ G LEDSN + E+ M+ Sbjct: 340 LASFRNAQGLADIGNNLWVETFESGQPVMGVATEGAFGALRSGALEDSNVDLTAELVNMM 399 Query: 215 HLTQKFNSITTLIDENEKSMLEAIR 239 + + + I ++ M + Sbjct: 400 TAQRAYQANAQTIKTQDQVMSTLVN 424 >gi|146296289|ref|YP_001180060.1| hypothetical protein Csac_1266 [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145409865|gb|ABP66869.1| protein of unknown function DUF1078 domain protein [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 484 Score = 93.8 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 37/155 (23%), Positives = 65/155 (41%), Gaps = 15/155 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S + + A + R+ + DN++N +TVGF++ +V F+ V ++ Sbjct: 1 MMRSMFSSITSLRAHQTRMDVIGDNIANVNTVGFKSSRVTFASVFASVIKAASAPDTTSG 60 Query: 49 --KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGR 105 ++ Q V+ ++ GS T D A+EGD +F + R TR G Sbjct: 61 RGGSNPMQIGLGVSVASVDMNMTRGSLQRTDNPTDLAIEGDGFFVVGGDGRAPRFTRAGN 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF 140 F + G+LV+A+G + MA + Sbjct: 121 FSLDKMGNLVTANGLNVLGWMADPVNNQIDTTKSP 155 Score = 85.3 bits (209), Expect = 7e-15, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 36/93 (38%), Gaps = 5/93 (5%) Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANS 206 ++I + + + G R ++ + E + T+ +G LE SN + Sbjct: 389 NQLIGQIAIATFANPAGLQRIGDNLYINTVNSGDPEIGTPGSGSRGTISQGTLEMSNVDL 448 Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E MI + + + +I +++ + + + Sbjct: 449 AKEFTDMIVTQRGYQANARVITASDELLQDLVN 481 >gi|319787121|ref|YP_004146596.1| flagellar hook-basal body protein [Pseudoxanthomonas suwonensis 11-1] gi|317465633|gb|ADV27365.1| flagellar hook-basal body protein [Pseudoxanthomonas suwonensis 11-1] Length = 406 Score = 93.4 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 31/129 (24%), Positives = 60/129 (46%), Gaps = 2/129 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVAS 61 SFN L+ A L+ ++N++N++TVGF++ + +F+++ + + + S V Sbjct: 2 SFNASLSGINAANADLNVTSNNIANSNTVGFKSSRAEFADLFSSTSYGLASNAVGSGVKV 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 G+ TG LDFA++G+ F + TR G F+ + G +V+ G Sbjct: 62 SNVAQQFSQGNIDPTGRSLDFAIDGEGLFTVSKNGDTFYTRAGNFQPDNRGFVVTPDGAR 121 Query: 122 PVLDMASVP 130 + + Sbjct: 122 LQVYAPNAN 130 Score = 76.1 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 13/90 (14%), Positives = 30/90 (33%), Gaps = 5/90 (5%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYE 209 + + L + QG N+ + + ++ G LE S + + Sbjct: 315 LGQIVLTNFVNPQGLQAVGNNMWAATHSSGTPRSGAPDSSDFGRIQAGALEASTVDLTEQ 374 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + MI + F + +I +++ I Sbjct: 375 LVNMITAQRNFQANAQMISTQDQATQTVIN 404 >gi|224419257|ref|ZP_03657263.1| flagellar hook protein FlgE [Helicobacter canadensis MIT 98-5491] gi|253826972|ref|ZP_04869857.1| flagellar hook protein [Helicobacter canadensis MIT 98-5491] gi|313142759|ref|ZP_07804952.1| flagellar hook protein [Helicobacter canadensis MIT 98-5491] gi|253510378|gb|EES89037.1| flagellar hook protein [Helicobacter canadensis MIT 98-5491] gi|313131790|gb|EFR49407.1| flagellar hook protein [Helicobacter canadensis MIT 98-5491] Length = 751 Score = 93.4 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 33/141 (23%), Positives = 53/141 (37%), Gaps = 14/141 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ A + L ++N++N +T GF+ + FS +V K Sbjct: 1 MLRSLWSGVSGMQAHQVALDVESNNIANVNTNGFKYSRADFSTMVSQTKRAATIPYAGYG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106 GS +T + D ALEG+ F + + + TRDG F Sbjct: 61 GVNDYSVGLGTGIETTTKIFSQGSLQNTDRKADLALEGNGMFVVSNNGGFTNMYTRDGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMA 127 G+LV+ SG + Sbjct: 121 SFDAVGNLVTTSGYIVQGWVR 141 Score = 61.4 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 12/127 (9%), Positives = 42/127 (33%), Gaps = 5/127 (3%) Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + D + + + + + +A + + S +G ++ Sbjct: 621 SQANNIDGDGYTAGMLQDFYFDATGTMIGKFDNGQTLALAQVAVASFANYEGLQESGSNL 680 Query: 177 ISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 + + +++ LE SN++ + Q+I + + F + + I ++ Sbjct: 681 FAESPNSGGPTIGTAGSGGRASIQASKLEMSNSDLSRGLTQLIVVQRGFQASSKSITTSD 740 Query: 232 KSMLEAI 238 + + + Sbjct: 741 QILNTLL 747 >gi|196045154|ref|ZP_03112387.1| putative flagellar basal-body rod protein [Bacillus cereus 03BB108] gi|196024156|gb|EDX62830.1| putative flagellar basal-body rod protein [Bacillus cereus 03BB108] Length = 249 Score = 93.4 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 41/246 (16%), Positives = 84/246 (34%), Gaps = 15/246 (6%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DIDQKISFVASG 62 + QR++ ++N++N T+GF+ + + +I V Sbjct: 2 GMMNYMQRINVHSNNVANAQTIGFKAENMTSKVFDVQDTYRRGDGAVTNIGSVDYAVVPA 61 Query: 63 KEYLSKEVGSFISTGTELDFALEGDA-----WFALESPRGIILTRDGRFKVTDDGSLVSA 117 +++ G+ T + DF L+ +F LTRDG F + D L + Sbjct: 62 ATHVNLVQGNIQMTNSATDFFLDDGTAGTASFFVTSKNNETFLTRDGSFTLNSDRYLQTT 121 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV--DMSQGFVRRENS 175 SG + + + + IA + +V + + ++REN Sbjct: 122 SGAFVMGENNERIRIPEGAKVAVQADGTLYDAVTQNNIARLQTKTVGAEANNRLIQRENK 181 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 + VK LE+SN + EM ++ + ++ ++ +K Sbjct: 182 SFTLAEGNIADLPNGTGLVKNHMLENSNVDMTKEMADLMTDQRMISASQRVMTSFDKIYE 241 Query: 236 EAIRNI 241 + I Sbjct: 242 KEANEI 247 >gi|89092136|ref|ZP_01165091.1| flagellar hook protein (FlgE)-like [Oceanospirillum sp. MED92] gi|89083871|gb|EAR63088.1| flagellar hook protein (FlgE)-like [Oceanospirillum sp. MED92] Length = 634 Score = 93.4 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 40/209 (19%), Positives = 72/209 (34%), Gaps = 9/209 (4%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK---ISF 58 FN + A L + +N++N+ TVGF+T + +F ++ S Sbjct: 1 MAGFNTAVTGLKAASTDLDVIGNNIANSSTVGFKTSRTEFGDIYATAVVGAGSSNVAGSG 60 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSA 117 V + G+ T LD A+ G +F L+ + G TR G F++ DG +VS Sbjct: 61 VTVSDIAQDFQAGTIEFTNNNLDLAINGSGFFQLDDGQGGTTFTRAGAFQLDKDGFIVSK 120 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN--- 174 SGK+ + ++ + + + S + + Sbjct: 121 SGKFLQGYGLDDQGNRLPIGNLAVSQKESPPKATEDIDLSFNIDSREDPTTLTFPYDKDT 180 Query: 175 --SGISPNIPPTPLEDLSGVTVKRGFLED 201 S T + T+K +E Sbjct: 181 PASFTYSTTVRTFDSLGNEHTIKYNMVER 209 Score = 72.2 bits (175), Expect = 6e-11, Method: Composition-based stats. Identities = 13/122 (10%), Positives = 37/122 (30%), Gaps = 5/122 (4%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 D + I + + + + + + + + G ++ + + Sbjct: 512 TQDGYTKGDLIGVSFSETGEMVASFSNGQNQDLGVVAIATFENQSGLQPSGDTEWTATLT 571 Query: 183 P-----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 P T++ LE SN + E+ +I + F + + I+ Sbjct: 572 SGDAIVNPPGTGLNGTLRSAALEQSNVDLSAELVALIEAQRNFQANSKTIETQNTVTQAI 631 Query: 238 IR 239 ++ Sbjct: 632 LQ 633 >gi|308050372|ref|YP_003913938.1| flagellar hook-basal body protein [Ferrimonas balearica DSM 9799] gi|307632562|gb|ADN76864.1| flagellar hook-basal body protein [Ferrimonas balearica DSM 9799] Length = 468 Score = 93.4 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 39/184 (21%), Positives = 75/184 (40%), Gaps = 5/184 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61 SFNI L+ A ++ L+T ++N++N +T+GF+ + +F++V N + VA+ Sbjct: 2 SFNISLSGLNAAQKDLNTTSNNIANVNTIGFKESRAEFADVYNNSLFTNSKTNVGAGVAT 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALES---PRGIILTRDGRFKVTDDGSLVSAS 118 + G+ T LD A+ G+ +F S + TR G FK+ D +V + Sbjct: 62 AQIAQQFHQGALSFTNNALDLAINGNGFFVTNSELGGQDFSYTRAGAFKLNDSNFMVDSQ 121 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178 G Y + + + + + + S+++ V + Sbjct: 122 GNYLMALPVNADGSVQSVSLSTTKPVQIPQTAGQPAATSDINMSMNLPANDVEMNPANFD 181 Query: 179 PNIP 182 P P Sbjct: 182 PTDP 185 Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 35/98 (35%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGI-SPNIPPTP----LEDLSGVTVKRGFLED 201 + + + + L QG + N+ N P + +++ LE Sbjct: 369 YSNGTQQALGKVALARFSNEQGLTQIGNTSWKQSNDSGEPLVGEPNVGAFGSIRSAALEQ 428 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ +I + F + + +D + + ++ Sbjct: 429 SNVDLTTELVDLISAQRNFQANSRALDVSNQLSQNILQ 466 >gi|148546706|ref|YP_001266808.1| flagellar basal body FlaE domain-containing protein [Pseudomonas putida F1] gi|148510764|gb|ABQ77624.1| flagellar basal body FlaE domain protein [Pseudomonas putida F1] Length = 584 Score = 93.4 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 34/134 (25%), Positives = 59/134 (44%), Gaps = 3/134 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---DIDQKISFVA 60 SFNIGL+ A ++L +N++N +T GF+ + +F++V +Q + V Sbjct: 2 SFNIGLSGLYAANKQLDVTGNNIANVNTTGFKASRAEFADVYAGANRLGVGKNQVGNGVR 61 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 G +TG LD ++G +F L + TR G F+ + D + ++ G Sbjct: 62 LAAISQQFTQGDVNTTGNALDMGIQGQGFFVLSDNGSKVYTRAGSFQPSKDNFVETSDGL 121 Query: 121 YPVLDMASVPIQIP 134 MA +I Sbjct: 122 RLQGYMADATGKIQ 135 Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats. Identities = 27/218 (12%), Positives = 59/218 (27%), Gaps = 21/218 (9%) Query: 29 TDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTEL-DFALEGD 87 T+ F + S + + + V + + + ++G + A+ Sbjct: 379 VGTIAFNSDGSVNSMTADNTGHPVGTSFTVVNNTFSMIGWVPAAEDASGNWSANGAVGDA 438 Query: 88 AWFALESPRGIIL-TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG 146 A + T R + DG + V Sbjct: 439 AGMKMSMASTTSYNTETARMSQSQDGYATGILSNL--------------SIDATGVLFAS 484 Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLED 201 + + + I + L S QG + ++ + + + ++ LE Sbjct: 485 FSNGQSRAIGQVALASFANEQGLQQIGSTRWTETYNSGIPGIDSPKTGTLGAIESNSLEG 544 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN N E+ +I + + I M I+ Sbjct: 545 SNVNLTQELVDLIKAQSYYQANAKTISTESTVMQTIIQ 582 >gi|190574263|ref|YP_001972108.1| flagellar hook protein FlgE [Stenotrophomonas maltophilia K279a] gi|190012185|emb|CAQ45808.1| putative flagellar hook protein [Stenotrophomonas maltophilia K279a] Length = 407 Score = 93.4 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 37/193 (19%), Positives = 71/193 (36%), Gaps = 4/193 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVAS 61 FN+ L+ A LS A+N++N +T GF+ + +F+++ A + + S V Sbjct: 2 GFNVSLSGINAANSDLSVTANNVANVNTTGFKESRAEFADLFSATGYGLSKNAVGSGVRV 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 + G TG LD A+ G+ +F + + +R G F+ G +V+ G Sbjct: 62 SNVAQQFKQGHNEQTGRSLDMAISGEGFFTMNMNGTRVYSRAGNFQTDASGYVVNPQG-- 119 Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 L + + D V + + + + + + P Sbjct: 120 ARLQVFAPNADGTNFDAGRMVDLQLLTTDSPPKQTSEVKVGFTLPANAKQPTVTTFDPTD 179 Query: 182 PPTPLEDLSGVTV 194 + G+TV Sbjct: 180 SNSYNHSSGGITV 192 Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 31/92 (33%), Gaps = 5/92 (5%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSM 207 K + + L + + QG + N+ + ++ G LE S + Sbjct: 314 KPLGQVALTTFNNPQGLESKGNNLWVDTFSSGTPRTGMPDTSNLGKIQAGSLEASTVDLT 373 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 ++ MI + F + +I ++ I Sbjct: 374 EQLVNMITAQRNFQANAQMITTQDQITQTVIN 405 >gi|315127353|ref|YP_004069356.1| flagellar hook protein E [Pseudoalteromonas sp. SM9913] gi|315015867|gb|ADT69205.1| flagellar hook protein E [Pseudoalteromonas sp. SM9913] Length = 440 Score = 93.4 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 5/125 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61 SFNI L A ++ L A+N++N +T GF+ + +F++V + + V + Sbjct: 2 SFNIALTGLAAAQKDLDVTANNIANVNTTGFKESRAEFADVYASSVFSAGKTKNGDGVQT 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESP---RGIILTRDGRFKVTDDGSLVSAS 118 GS T LD A+ G+ +FA + TR G FK+ D +V A Sbjct: 62 TMVAQQFHQGSLQFTNNSLDLAITGEGYFATSQDLGAQDFTYTRAGAFKLNKDNFVVDAK 121 Query: 119 GKYPV 123 G + Sbjct: 122 GNFLQ 126 Score = 68.0 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 25/215 (11%), Positives = 54/215 (25%), Gaps = 24/215 (11%) Query: 30 DTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAW 89 T GF + A N + G + D A+ Sbjct: 243 STFGFDAS------GLPATTNGAPNVGPTFTDVNLTGTNLSGILSNGAQFDDIAINWRDE 296 Query: 90 FALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEIS 149 + V A + I I ++ G+ + Sbjct: 297 AGTANRTPTQY---------ASRFEVKALEQDGATVGRLAGIDIGTDGKVVASYSNGDST 347 Query: 150 QKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNA 204 + + + SQG + ++ ++ + + LE SN Sbjct: 348 Y----LGQVAMVRFSNSQGLQQVGDTSWKKSLTSGEPIAGEPGSGTLGNINSSALEQSNV 403 Query: 205 NSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 N E+ +I + F + + ++ N ++ Sbjct: 404 NLTNELVDLISAQRNFQANSRALEVNSTIQQNILQ 438 >gi|118475525|ref|YP_892884.1| flagellar hook protein FlgE [Campylobacter fetus subsp. fetus 82-40] gi|118414751|gb|ABK83171.1| flagellar hook protein FlgE [Campylobacter fetus subsp. fetus 82-40] Length = 911 Score = 93.4 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 27/145 (18%), Positives = 52/145 (35%), Gaps = 14/145 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M + G+ A + + DN++N +TVGF+ + F+++ Sbjct: 1 MMRALWAGVTGLQAHQIAMDVEGDNIANVNTVGFKYSRASFADLFSQTAKVATAPQGDLG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106 + Q + GS +T D A++GD +F + + TR+G F Sbjct: 61 GKNSMQIGLGTQINSVTKIFKQGSVQTTDKNTDLAIQGDGFFVVSPDGGKTYKYTRNGDF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPI 131 G+ V +G + + Sbjct: 121 SRDSLGNFVDKNGYIVQGWLRNEDT 145 Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 12/129 (9%), Positives = 39/129 (30%), Gaps = 5/129 (3%) Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 +++ V D + + + + + +A + L ++G + Sbjct: 780 TSTTDNIVQDGYTAGTLNELRVDESGTIIGAFTNGRSFGLAQVALAKFTNNEGLESDGGN 839 Query: 176 GISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + LE SN + + Q+I + + + + + I Sbjct: 840 VFVQTANSGAPVIGSAQTAGRGKINASSLEMSNVDLSRSLTQLIVVQRGYQANSKTITTG 899 Query: 231 EKSMLEAIR 239 ++ + ++ Sbjct: 900 DQMLNTLLQ 908 >gi|325274800|ref|ZP_08140828.1| flagellar hook protein FlgE [Pseudomonas sp. TJI-51] gi|324100068|gb|EGB97886.1| flagellar hook protein FlgE [Pseudomonas sp. TJI-51] Length = 440 Score = 93.4 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 36/136 (26%), Positives = 60/136 (44%), Gaps = 4/136 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ----KISFV 59 SFNIGL+ A + L+ +N++N T GF++ + +F++ + V Sbjct: 2 SFNIGLSGLYAANKALNVTGNNIANVATTGFKSSRAEFADQYSNSIRGTSAGKSVIGTGV 61 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119 + G+ +TG LD A++G+ +FAL I TR G F +G +V+A G Sbjct: 62 KTAAVSQLFTPGNINATGQALDMAIDGNGFFALNDNGSKIYTRAGAFYSDKEGYVVNAGG 121 Query: 120 KYPVLDMASVPIQIPQ 135 +I Q Sbjct: 122 ANLQGYAVGEDGKIIQ 137 Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 30/92 (32%), Gaps = 5/92 (5%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLEDSNANSM 207 KVI + + + QG + + + + + G LEDSN + Sbjct: 347 KVIGQVAIANFANLQGLTPIGGTNWKESYASGVPVIGAPDTGTLGQITGGALEDSNVDLT 406 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E+ +I + + I M I+ Sbjct: 407 GELVNLIKAQSNYQANAKTISTESTIMQTIIQ 438 >gi|94500241|ref|ZP_01306774.1| Flagellar hook protein FlgE [Oceanobacter sp. RED65] gi|94427540|gb|EAT12517.1| Flagellar hook protein FlgE [Oceanobacter sp. RED65] Length = 1240 Score = 93.4 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 2/133 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61 +FNIGL+ A L +N++N TVGF+ + +F++V S V Sbjct: 2 AFNIGLSGIRAASTDLEVTGNNVANASTVGFKESRAEFADVYTTTILGTGSKPVGSGVLV 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 G+ T LD A++G+ +F L TR G F + DG +V+ SG Sbjct: 62 DNVRQEFSQGNISGTENALDMAIDGNGFFILNDNGTESYTRAGIFGLDKDGFVVANSGAR 121 Query: 122 PVLDMASVPIQIP 134 A+ + Sbjct: 122 LQGYEANGDGVVN 134 Score = 72.6 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 14/94 (14%), Positives = 35/94 (37%), Gaps = 5/94 (5%) Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNAN 205 + +V+ + L S +G + ++ + + ++ LEDSN + Sbjct: 1146 QAEVLGQVALASFKNPEGLIPLGDTAWGESFESGTPTVGSPRTGTFGNLRSSALEDSNVD 1205 Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E+ +I + F + I+ ++ I+ Sbjct: 1206 LSEELVGLIIAQRNFQASAKTIETSDTVTQTIIQ 1239 >gi|254519414|ref|ZP_05131470.1| flagellar hook protein [Clostridium sp. 7_2_43FAA] gi|226913163|gb|EEH98364.1| flagellar hook protein [Clostridium sp. 7_2_43FAA] Length = 885 Score = 93.4 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 34/226 (15%), Positives = 67/226 (29%), Gaps = 15/226 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--------- 51 M S G++ + +L + +N+SN T F++ + +FS+++ +D Sbjct: 7 MLRSMYSGISGMKVNQTKLDVIGNNISNVGTTSFKSSRARFSDMLSQNVSDAMAPSNNQG 66 Query: 52 ---IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFK 107 Q V G TG +LD A++GD +F + I T + + Sbjct: 67 GVNASQVGLGVQLASIDSVMTQGMMQPTGRQLDVAIDGDGFFMVSKGPAIYDGTLEVNHR 126 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 + M S ++ + G + Sbjct: 127 AGAHNITSQSLSNSGSEIMYSRDGSFILDEQGNLLTGDGFRVMGYSLTNDDSSQEATGQV 186 Query: 168 GFVRRENSGISPNIPPTPLEDLSG--VTVKRGFLEDSNANSMYEMG 211 P + L +V G + +N N ++ Sbjct: 187 PNAVSTAGLDFRFGPGSQLNGFKVVLGSVGPGTVTSANVNKAEKLI 232 Score = 74.9 bits (182), Expect = 8e-12, Method: Composition-based stats. Identities = 14/97 (14%), Positives = 35/97 (36%), Gaps = 12/97 (12%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIP-PTPLEDLSGVTV-----------KRGFLEDS 202 + + + S +G + + S ++ + T+ +G LE S Sbjct: 786 LGQLAMASFKNPEGLTKLGGNLYSSSVNSGDAIIKSGVGTLNDDNSNGYGDNLQGMLEMS 845 Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 N + + MI ++ F + +I ++ + + I Sbjct: 846 NVDLSEQFTDMIVSSRAFQAAGKMITTGDEILQDIIN 882 >gi|254524254|ref|ZP_05136309.1| flagellar biosynthesis hook protein [Stenotrophomonas sp. SKA14] gi|219721845|gb|EED40370.1| flagellar biosynthesis hook protein [Stenotrophomonas sp. SKA14] Length = 407 Score = 93.0 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 30/129 (23%), Positives = 56/129 (43%), Gaps = 2/129 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVAS 61 FN+ L+ A LS A+N++N +T GF+ + +F+++ A + + S V Sbjct: 2 GFNVSLSGINAANSDLSVTANNVANVNTTGFKESRAEFADLFSATGYGLSKNAVGSGVRV 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 + G TG LD A+ G+ +F + + +R G F+ G +V+ G Sbjct: 62 SNVAQQFKQGHNEQTGRSLDMAISGEGFFTMNMNGTRVYSRAGNFQTDASGFVVNPQGAR 121 Query: 122 PVLDMASVP 130 + + Sbjct: 122 LQVFAPNAD 130 Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 31/92 (33%), Gaps = 5/92 (5%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSM 207 K + + L + + QG + N+ + ++ G LE S + Sbjct: 314 KPLGQVALTTFNNPQGLESKGNNLWVDTFSSGTPRTGMPDTSNLGKIQAGSLEASTVDLT 373 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 ++ MI + F + +I ++ I Sbjct: 374 EQLVNMITAQRNFQANAQMITTQDQITQTVIN 405 >gi|15596277|ref|NP_249771.1| flagellar hook protein FlgE [Pseudomonas aeruginosa PAO1] gi|107100525|ref|ZP_01364443.1| hypothetical protein PaerPA_01001550 [Pseudomonas aeruginosa PACS2] gi|218892956|ref|YP_002441825.1| flagellar hook protein FlgE [Pseudomonas aeruginosa LESB58] gi|254234216|ref|ZP_04927539.1| flagellar hook protein FlgE [Pseudomonas aeruginosa C3719] gi|254239438|ref|ZP_04932760.1| flagellar hook protein FlgE [Pseudomonas aeruginosa 2192] gi|9946996|gb|AAG04469.1|AE004539_11 flagellar hook protein FlgE [Pseudomonas aeruginosa PAO1] gi|126166147|gb|EAZ51658.1| flagellar hook protein FlgE [Pseudomonas aeruginosa C3719] gi|126192816|gb|EAZ56879.1| flagellar hook protein FlgE [Pseudomonas aeruginosa 2192] gi|218773184|emb|CAW28996.1| flagellar hook protein FlgE [Pseudomonas aeruginosa LESB58] Length = 462 Score = 93.0 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 35/134 (26%), Positives = 58/134 (43%), Gaps = 2/134 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61 SFNIGL+ A L+ +N++N TVGF+ + +F++V A + + + S V Sbjct: 2 SFNIGLSGIQAASSGLNVTGNNIANAGTVGFKQSRAEFADVYAASVLGSGSNPQGSGVLL 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 + G+ ST + LD A+ G+ +F + I TR G F +V +G Sbjct: 62 SDVSQMFKQGNIDSTNSVLDLAINGNGFFVTSNNGAISYTRAGYFNTDKQDFIVDNNGYR 121 Query: 122 PVLDMASVPIQIPQ 135 Q+ Sbjct: 122 LQGYAVGPNGQLQN 135 Score = 72.6 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 17/124 (13%), Positives = 37/124 (29%), Gaps = 5/124 (4%) Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 P+ D + + + V + + KV + L + QG + + Sbjct: 337 NPIQDGYTTGQLAGLEIDDTGVIFARYTNGQSKVQGQVVLANFANIQGLTPIGKTSWVQS 396 Query: 181 IPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 + ++ G LE SN + E+ +I + + + I + Sbjct: 397 SESGEPAVGAPRSGTLGALQSGALEASNVDISNELVNLIVHQRNYQANAKTIQTEDAVTQ 456 Query: 236 EAIR 239 I Sbjct: 457 TIIN 460 >gi|116049009|ref|YP_792189.1| flagellar hook protein FlgE [Pseudomonas aeruginosa UCBPP-PA14] gi|296390556|ref|ZP_06880031.1| flagellar hook protein FlgE [Pseudomonas aeruginosa PAb1] gi|313106035|ref|ZP_07792294.1| flagellar hook protein FlgE [Pseudomonas aeruginosa 39016] gi|115584230|gb|ABJ10245.1| flagellar hook protein FlgE [Pseudomonas aeruginosa UCBPP-PA14] gi|310878796|gb|EFQ37390.1| flagellar hook protein FlgE [Pseudomonas aeruginosa 39016] Length = 462 Score = 93.0 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 35/134 (26%), Positives = 58/134 (43%), Gaps = 2/134 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61 SFNIGL+ A L+ +N++N TVGF+ + +F++V A + + + S V Sbjct: 2 SFNIGLSGIQAASSGLNVTGNNIANAGTVGFKQSRAEFADVYAASVLGSGSNPQGSGVLL 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 + G+ ST + LD A+ G+ +F + I TR G F +V +G Sbjct: 62 SDVSQMFKQGNIDSTNSVLDLAINGNGFFVTSNNGAISYTRAGYFNTDKQDFIVDNNGYR 121 Query: 122 PVLDMASVPIQIPQ 135 Q+ Sbjct: 122 LQGYAVGPNGQLQN 135 Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 17/124 (13%), Positives = 37/124 (29%), Gaps = 5/124 (4%) Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 P+ D + + + V + + KV + L + QG + + Sbjct: 337 NPIQDGYTTGQLAGLEIDDTGVIFARYTNGQSKVQGQVVLANFANIQGLTPIGKTSWVQS 396 Query: 181 IPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 + ++ G LE SN + E+ +I + + + I + Sbjct: 397 AESGEPAVGAPRSGTLGALQSGALEASNVDISNELVNLIVHQRNYQANAKTIQTEDAVTQ 456 Query: 236 EAIR 239 I Sbjct: 457 TIIN 460 >gi|325918877|ref|ZP_08180954.1| flagellar hook protein FlgE [Xanthomonas vesicatoria ATCC 35937] gi|325534914|gb|EGD06833.1| flagellar hook protein FlgE [Xanthomonas vesicatoria ATCC 35937] Length = 407 Score = 93.0 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 28/128 (21%), Positives = 58/128 (45%), Gaps = 2/128 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--ISFVAS 61 +FN L+ A L+ ++N++N +T GF+ + +F+++ + + + S V Sbjct: 2 AFNTSLSGINAANADLNVTSNNIANVNTTGFKESRAEFADMFQSTSYGLSRNAVGSGVRV 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 G+ TG LD A+ G+ +F + S + TR G F+ +G +++ G Sbjct: 62 SNVAQQFSQGNIDPTGRSLDLAVSGEGFFTVSSNGAKMYTRAGNFQTDSNGYVINPQGAR 121 Query: 122 PVLDMASV 129 + + Sbjct: 122 LQVFAPNP 129 Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 33/92 (35%), Gaps = 5/92 (5%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSM 207 K + + L S QG + N+ + + + ++ G LE S + Sbjct: 314 KPLGQVALSSFVNPQGLQSQGNNMWAESYTSGAARTGAPDTSDLGQIESGSLEASTVDLT 373 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 ++ MI + F + + +I ++ I Sbjct: 374 EQLVNMIVAQRNFQANSQMISTQDQVTQTIIN 405 >gi|317154735|ref|YP_004122783.1| flagellar hook-basal body protein [Desulfovibrio aespoeensis Aspo-2] gi|316944986|gb|ADU64037.1| flagellar hook-basal body protein [Desulfovibrio aespoeensis Aspo-2] Length = 554 Score = 93.0 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 33/171 (19%), Positives = 56/171 (32%), Gaps = 5/171 (2%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA---IKNDIDQKISFV 59 +S G+ +R++ + +N++N +TVGF+ ++F +++ N + Q V Sbjct: 5 SSLYAGITGLTVHSERMTVIGNNLANVNTVGFKGTWMQFEDLLSQDFATVNGVGQIGRGV 64 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP--RGIILTRDGRFKVTDDGSLVSA 117 Y GSF S+ D A+ GD F L +R G F+ +DG LV Sbjct: 65 RVSTIYSDFGQGSFESSTEATDVAISGDGMFVLSPKGLDSKFYSRAGNFRFDNDGYLVDP 124 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 G G + Sbjct: 125 HGYVVQGWAVEQATTSVSSTSATTTSTVNSTRIVGTPTDIRLDNFQSSPKA 175 Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 55/210 (26%), Gaps = 14/210 (6%) Query: 36 TIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP 95 +E A +D IS + +G+ S A+ + Sbjct: 348 KSNASTAEAANATPIQMDFGISNNDLSGNGWTVSLGTMPSNAAAAQLAITNSTGYLPSF- 406 Query: 96 RGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI 155 RD S + I Q + G G+VI Sbjct: 407 ------RDPAVSALATQSYNTGGSSTLFQGQDGYSAGILQNISVSREGVLTGHYSNGEVI 460 Query: 156 ATMGLY--SVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMY 208 L + G R + S P TV LE SN + Sbjct: 461 ELYALTLATFTNKHGLRREGGNLFSETRESGPALTGQAGSSGKGTVDGNALELSNVDMAT 520 Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 E +MI + F + T +I + + E I Sbjct: 521 EFVRMITTQRGFQANTKVITTTDSMLGEVI 550 >gi|323700159|ref|ZP_08112071.1| fagellar hook-basal body protein [Desulfovibrio sp. ND132] gi|323460091|gb|EGB15956.1| fagellar hook-basal body protein [Desulfovibrio desulfuricans ND132] Length = 558 Score = 93.0 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 31/169 (18%), Positives = 53/169 (31%), Gaps = 5/169 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG---AIKNDIDQKISFVA 60 S G++ +R++ + +N++N +T GF+ ++F ++ A N + Q V Sbjct: 6 SLFSGISGLTVHSERMTVIGNNLANVNTTGFKGAMMQFEDLASADFATVNGVGQVGRGVR 65 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRFKVTDDGSLVSAS 118 Y G+F ++ D A+ GD F + TR G F+ DG LV Sbjct: 66 VSTIYSDWGQGAFETSTEATDMAISGDGLFVVSPLGEDEKYYTRAGNFRFDSDGYLVDPH 125 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 G G Sbjct: 126 GYVLQGWEIERSTTTVTTTTSSTTETANSARIIGTPTNIRMENFQSEPN 174 Score = 76.1 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 16/83 (19%), Positives = 27/83 (32%), Gaps = 5/83 (6%) Query: 162 SVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHL 216 + G R + + + P T+ LE SN + E MI Sbjct: 473 TFTNQHGLRREGGNLFTETLESGPALTGQAGSTGKGTIDGNALEMSNVDMATEFVNMITT 532 Query: 217 TQKFNSITTLIDENEKSMLEAIR 239 + F + T +I + + E I Sbjct: 533 QRGFQANTKVITTVDSMLGEVIS 555 >gi|315639349|ref|ZP_07894511.1| flagellar hook protein [Campylobacter upsaliensis JV21] gi|315480675|gb|EFU71317.1| flagellar hook protein [Campylobacter upsaliensis JV21] Length = 839 Score = 93.0 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 32/183 (17%), Positives = 57/183 (31%), Gaps = 14/183 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G++ A + + +N+SN +T GF+ + F + Sbjct: 1 MMRSLWSGVSGMQAHQIAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATVPTENLG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106 + Q + GS +T D A+ GD +F + LTR G F Sbjct: 61 GQNPLQIGLGTSINSTTRIHSQGSVQTTDKNTDVAINGDGFFMVSDDGGLTRYLTRSGDF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 K+ G+ V+ +G + Q +T +++ Sbjct: 121 KLDAAGNFVNNAGFVVQGWNINWDDQSIDTSRSPKNLFIDPGLHIPAAKSTEVAIKANLN 180 Query: 167 QGF 169 G Sbjct: 181 SGL 183 Score = 68.4 bits (165), Expect = 8e-10, Method: Composition-based stats. Identities = 14/94 (14%), Positives = 35/94 (37%), Gaps = 5/94 (5%) Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNAN 205 K +A + + SV + G + + T +K LE SN + Sbjct: 743 KTFAVAKIAMASVANNSGLEEIGGNLFKVTGNSGNIVVGEAGTGGRGEMKTSALEMSNVD 802 Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + Q+I + + + + + I +++ + ++ Sbjct: 803 LSRSLTQLIVVQRGYQANSKTISTSDQMLNTLLQ 836 >gi|17989452|ref|NP_542085.1| flagellar basal-body rod protein FLGF [Brucella melitensis bv. 1 str. 16M] gi|256043051|ref|ZP_05445996.1| flagellar basal body rod protein FlgF [Brucella melitensis bv. 1 str. Rev.1] gi|260564283|ref|ZP_05834768.1| flagellar basal body rod protein [Brucella melitensis bv. 1 str. 16M] gi|265989489|ref|ZP_06102046.1| flagellar basal body rod protein FlgF [Brucella melitensis bv. 1 str. Rev.1] gi|17985331|gb|AAL54349.1| flagellar basal-body rod protein flgf [Brucella melitensis bv. 1 str. 16M] gi|260151926|gb|EEW87019.1| flagellar basal body rod protein [Brucella melitensis bv. 1 str. 16M] gi|263000158|gb|EEZ12848.1| flagellar basal body rod protein FlgF [Brucella melitensis bv. 1 str. Rev.1] Length = 173 Score = 93.0 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 56/163 (34%), Positives = 86/163 (52%), Gaps = 4/163 (2%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 S +GL++ + LE+R+ +A N++N TVGFR KF +V +D +SF + Sbjct: 3 NNSIYVGLSSLITLERRMDAIAHNVANASTVGFRGEGTKFDTIVSDKASD---DVSFATA 59 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 GK Y+ E G I T LD A++GDAW + +P+G + +RDGR K+ G VS +G Sbjct: 60 GKSYIRTEAGPLIKTDNPLDVAVKGDAWMSFSTPQGQVYSRDGRMKMLSTGDPVSVTGNA 119 Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 LD+ PI + + G I Q G + +GLY++ Sbjct: 120 I-LDVGGAPIVLNPGGGAPRISSDGAIYQNGVQVGAIGLYTIP 161 >gi|146307869|ref|YP_001188334.1| flagellar hook protein FlgE [Pseudomonas mendocina ymp] gi|145576070|gb|ABP85602.1| flagellar basal body FlaE domain protein [Pseudomonas mendocina ymp] Length = 438 Score = 93.0 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 59/165 (35%), Gaps = 2/165 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61 SFNIGL+ A + L+ +N++N T GF+ + +F++V A + + S V Sbjct: 2 SFNIGLSGLRAATKDLNVTGNNIANAGTAGFKQSRAEFADVYAASVLGTGSNPQGSGVLL 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 G G+ T LD A+ G+ +F + I TR G F +G +V+ G Sbjct: 62 GDISQLFNQGNINYTQNALDLAINGNGFFVTSNNGEISYTRAGYFGTDREGFMVNNFGYR 121 Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 + + + + Sbjct: 122 LQGYTVDANGNLQNGVVSDLRIQTANQEPRATANLAQTFNLNSNN 166 Score = 65.7 bits (158), Expect = 5e-09, Method: Composition-based stats. Identities = 19/135 (14%), Positives = 40/135 (29%), Gaps = 9/135 (6%) Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169 V+ + ++I IF G+ +G+V+ L + QG Sbjct: 306 ASSFAVNRVSQDGYTTGQLAGLEIDDTGVIFARYTNGQSKVQGQVV----LANFANVQGL 361 Query: 170 VRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224 + + + ++ G LEDSN ++ +I + + + Sbjct: 362 TPVGKTAWVQSFQSGEPVVGTPRAGTLGALQAGALEDSNVELSDQLVNLIVAQRNYQANA 421 Query: 225 TLIDENEKSMLEAIR 239 I+ I Sbjct: 422 KTIETESAITQTIIN 436 >gi|26991077|ref|NP_746502.1| flagellar hook protein FlgE [Pseudomonas putida KT2440] gi|24986112|gb|AAN69966.1|AE016635_2 flagellar hook protein FlgE [Pseudomonas putida KT2440] Length = 440 Score = 93.0 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 4/159 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ----KISFV 59 SFNIGL+ A + L+ +N++N T GF++ + +F++ + V Sbjct: 2 SFNIGLSGLYAANKALNVTGNNIANVATTGFKSSRAEFADQYSNSIRGTSAGKTVIGTGV 61 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119 + G+ +TG LD A++G+ +FAL I TR G F G +V+ASG Sbjct: 62 KTAAVSQLFTPGNINATGQALDMAIDGNGFFALNDNGSKIYTRAGAFYSDKAGYVVNASG 121 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158 +I Q + ++ K + T Sbjct: 122 ANLQGYAVGEDGKIIQGILTDLQIDTSNLTPKPTSLITE 160 Score = 68.7 bits (166), Expect = 6e-10, Method: Composition-based stats. Identities = 24/216 (11%), Positives = 51/216 (23%), Gaps = 18/216 (8%) Query: 29 TDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA 88 + V F++ + + A I + + + A+ Sbjct: 236 VNAVPFKSDGTLDKDAMTAGDVAGGLSIGEDKIFQLNDWIPAQKNAAGEWSANGAIANAD 295 Query: 89 WFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI 148 L+ + +D Sbjct: 296 GVKLDMLGATQYNASSAEIAKTQDGFATGELSGLSIDQNG-------------YLFASFT 342 Query: 149 SQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLEDSN 203 + K KVI + + + QG + + + + + G LEDSN Sbjct: 343 NGKDKVIGQVAIANFANLQGLTPIGGTNWKESYASGVPVIGAPDTGTLGQISGGALEDSN 402 Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + E+ +I + + I M I+ Sbjct: 403 VDLTGELVNLIKAQSNYQANAKTISTESTIMQTIIQ 438 >gi|313497761|gb|ADR59127.1| FlgE [Pseudomonas putida BIRD-1] Length = 440 Score = 93.0 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 4/159 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ----KISFV 59 SFNIGL+ A + L+ +N++N T GF++ + +F++ + V Sbjct: 2 SFNIGLSGLYAANKALNVTGNNIANVATTGFKSSRAEFADQYSNSIRGTSAGKTVIGTGV 61 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119 + G+ +TG LD A++G+ +FAL I TR G F G +V+ASG Sbjct: 62 KTAAVSQLFTPGNINATGQALDMAIDGNGFFALNDNGSKIYTRAGAFYSDKAGYVVNASG 121 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158 +I Q + ++ K + T Sbjct: 122 ANLQGYAVGEDGKIIQGILTDLQIDTSNLTPKPTSLITE 160 Score = 68.7 bits (166), Expect = 6e-10, Method: Composition-based stats. Identities = 24/216 (11%), Positives = 51/216 (23%), Gaps = 18/216 (8%) Query: 29 TDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA 88 + V F++ + + A I + + + A+ Sbjct: 236 VNAVPFKSDGTLDKDAMTAGDVAGGLSIGEDKIFQLNDWIPAQKNAAGEWSANGAIANAD 295 Query: 89 WFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI 148 L+ + +D Sbjct: 296 GVKLDMLGATQYNASSAEIAKTQDGFATGELSGLSIDQNG-------------YLFASFT 342 Query: 149 SQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLEDSN 203 + K KVI + + + QG + + + + + G LEDSN Sbjct: 343 NGKDKVIGQVAIANFANLQGLTPIGGTNWKESYASGVPVIGAPDTGTLGQISGGALEDSN 402 Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + E+ +I + + I M I+ Sbjct: 403 VDLTGELVNLIKAQSNYQANAKTISTESTIMQTIIQ 438 >gi|269836573|ref|YP_003318801.1| hypothetical protein Sthe_0541 [Sphaerobacter thermophilus DSM 20745] gi|269785836|gb|ACZ37979.1| protein of unknown function DUF1078 domain protein [Sphaerobacter thermophilus DSM 20745] Length = 413 Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 30/140 (21%), Positives = 54/140 (38%), Gaps = 14/140 (10%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------- 48 S ++ A + L + +N++N T GF+ +V+F +V+ Sbjct: 3 NRSMASAVSGLKAYQTWLDVIGNNIANLATPGFKASRVRFEDVMSHTLRGASVPDPAQGR 62 Query: 49 -KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107 + Q V + G+ +TG A++G+ +F + TRDG F Sbjct: 63 GGRNPAQVGLGVLAAGIDTDYAPGTPTATGKMSHMAIQGEGYFVVADGFRTYYTRDGSFD 122 Query: 108 VTDDGSLVSASGKYPVLDMA 127 + DG LV+ S V+ Sbjct: 123 LGIDGRLVNPSTGLYVMGWQ 142 Score = 82.2 bits (201), Expect = 5e-14, Method: Composition-based stats. Identities = 13/90 (14%), Positives = 35/90 (38%), Gaps = 5/90 (5%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMYE 209 + + L + G ++ + +SP+ + G+LE SN + E Sbjct: 321 LGQIALATFANPGGLLKEGQNLLSPSPNSGQAVIGTPVTGGRGQIAAGYLEMSNVDLAEE 380 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 MI + F + + ++ +++ + + + Sbjct: 381 FTNMILAERGFQANSRVVTTSDEVLQDLVN 410 >gi|256829395|ref|YP_003158123.1| hypothetical protein Dbac_1614 [Desulfomicrobium baculatum DSM 4028] gi|256578571|gb|ACU89707.1| protein of unknown function DUF1078 domain protein [Desulfomicrobium baculatum DSM 4028] Length = 513 Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 32/197 (16%), Positives = 66/197 (33%), Gaps = 5/197 (2%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI---DQKISFV 59 +S IG +A ++ ++ ++DN++N TVGF++ + F+ ++ +Q V Sbjct: 5 SSLYIGTTGIMAQQKNMAVISDNIANVSTVGFKSSHMIFNTLMSQQMGSASVSNQVGQGV 64 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP--RGIILTRDGRFKVTDDGSLVSA 117 +G+ T T D ++ G +F + TR G F+ +G L Sbjct: 65 GVSSILYDMSLGALEPTNTATDISISGKGFFIVSPNGSSDQHYTRAGNFRFDAEGYLRDP 124 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177 G + I + + G S + +R + Sbjct: 125 QGNILQGYRMPAESILDTAPVIPPAASAPITDIRLDMQDGGGPVSEPEATTEMRMMINLD 184 Query: 178 SPNIPPTPLEDLSGVTV 194 S + + + Sbjct: 185 SSSQERSTSTTSPFTAL 201 Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 35/94 (37%), Gaps = 5/94 (5%) Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNAN 205 + + + + + QG R + S + +V LE+SN + Sbjct: 417 QNQGLYKIPMADFINPQGLFREGGNLFSATKDSGAVSVGWAGEGRLGSVITSSLENSNVD 476 Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E MI + F++ + +I ++ + AI+ Sbjct: 477 LATEFVNMIITQKGFDANSKVITTGDQVVQTAIQ 510 >gi|157364671|ref|YP_001471438.1| hypothetical protein Tlet_1820 [Thermotoga lettingae TMO] gi|157315275|gb|ABV34374.1| protein of unknown function DUF1078 domain protein [Thermotoga lettingae TMO] Length = 631 Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 42/207 (20%), Positives = 75/207 (36%), Gaps = 13/207 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G+A + + V +N++N +TVGF+ +V F + Sbjct: 1 MMRSMFSGVAGMRNFQYAIDVVGNNIANVNTVGFKGSRVTFQTALLQTMKAARSPQNNIG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 + Q GSF +TG + D A++GD +F L TR G V Sbjct: 61 GTNPIQIGLGSQLATIDKIMTQGSFENTGNKTDLAIQGDGFFVLSDGSQYYYTRAGALSV 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 +G+L+ +S Y V ++ + G+I + + +G Sbjct: 121 DTNGTLIQSSTGYKVQGWRAIQDPATGTRYVDTNQPIGDIVISAGMTMPANATTSATMEG 180 Query: 169 FVRRENSGISPNIPPTPLEDLSGVTVK 195 + + G +P ED + +V+ Sbjct: 181 NLNS-SVGPTPFSMTVTDEDGNEHSVR 206 Score = 75.7 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 31/92 (33%), Gaps = 5/92 (5%) Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANS 206 ++ + L + G +S + + T+ G LE SN + Sbjct: 536 TDILGQVALAVFNNPAGLTEIGDSLYITSSNSGLAQIGTAGSGGRGTLIPGALEMSNVDL 595 Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 E +MI + F + +I + + E + Sbjct: 596 AEEFTRMIIAQRGFQANARVITTADTILGELV 627 >gi|54307270|ref|YP_128290.1| flagellar hook protein FlgE [Photobacterium profundum SS9] gi|46911690|emb|CAG18488.1| Hypothetical flagellar hook protein FlgE [Photobacterium profundum SS9] Length = 472 Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 36/169 (21%), Positives = 78/169 (46%), Gaps = 2/169 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 S NIG++ +A +++++++ N++N T G+++ + +F ++ +++ V Sbjct: 2 SMNIGMSGLIATSEQMNSISHNIANVGTAGYKSSRTEFQDIYAPEFGGG--EMNGVEVAA 59 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPV 123 S + G+ TG D A+ G+ +F +E+ + TR+G F + DG+LV++ G + Sbjct: 60 IRQSFKNGTTTPTGRNGDLAINGEGFFMVENKGQQMFTRNGVFNLDKDGNLVASDGSHLQ 119 Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172 + QI E G++ + M + S V + Sbjct: 120 GYGVTGTGQIQTGTITDLTVETGDMPARSSTKVNMEVNLDANSLAIVPK 168 Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 15/100 (15%), Positives = 35/100 (35%), Gaps = 5/100 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLED 201 + + KV + L +G + N+ + + + T V+ G E+ Sbjct: 373 YSNGQTKVQGQVSLARFPNQEGLQQAGNTRWTQSFSSGAALVGAAGTGQLGNVRTGMYEN 432 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 SN + EM ++ + + I ++ +N+ Sbjct: 433 SNVDLSSEMVNLMSAQSNYQANAKTIKVAQEMTQILFQNL 472 >gi|150021173|ref|YP_001306527.1| hypothetical protein Tmel_1293 [Thermosipho melanesiensis BI429] gi|149793694|gb|ABR31142.1| protein of unknown function DUF1078 domain protein [Thermosipho melanesiensis BI429] Length = 705 Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 37/190 (19%), Positives = 68/190 (35%), Gaps = 14/190 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G+ +Q + V +N++N T+GF+ +V ++ + Sbjct: 1 MIRSIYSGVTGLQGFQQAIDVVGNNIANVSTIGFKASRVTYATTFSQVLELSKRATELTG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFK 107 + Q V GSF +TG + D A+ GD +F L TR G F Sbjct: 61 GTNPKQIGYGVKVASIDKIMSQGSFQNTGKKTDLAIRGDGFFILRDGVGKTYYTRAGNFD 120 Query: 108 VTDDGSLVSAS-GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 + +G+++ + G +A + ++ N G +A S+ ++ Sbjct: 121 LDVNGTIIQPTSGLKLQGWVAEPDPESGKRFVDTNKPISDIQISAGLSMAAKKTTSMTVA 180 Query: 167 QGFVRRENSG 176 R G Sbjct: 181 NNLDARVGPG 190 Score = 82.2 bits (201), Expect = 6e-14, Method: Composition-based stats. Identities = 13/129 (10%), Positives = 36/129 (27%), Gaps = 5/129 (3%) Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 ++ + + + + + L + G + NS Sbjct: 574 TSDAYVVNQNGNAQGTLESFSIAENGDIIGTFSNGLTDKLGKVALAIFNNPAGLLEAGNS 633 Query: 176 GISPNIPP-----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + + + G LE SN + E ++I + F + ++ Sbjct: 634 LYTKSANSGSAIIRQPGFGGAGALISGALEMSNVDLSEEFTKLIIAQRGFQANARVVTTA 693 Query: 231 EKSMLEAIR 239 ++ + E + Sbjct: 694 DQILQEVVN 702 >gi|296274021|ref|YP_003656652.1| fagellar hook-basal body protein [Arcobacter nitrofigilis DSM 7299] gi|296098195|gb|ADG94145.1| fagellar hook-basal body protein [Arcobacter nitrofigilis DSM 7299] Length = 783 Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 36/203 (17%), Positives = 70/203 (34%), Gaps = 19/203 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + G++ A ++ L + N++N +T+G++ ++ F++ + D+ Sbjct: 1 MIGALWTGISGLSAQQKALDNESHNIANVNTIGYKASRISFADQMYQ-----DKIGKGAK 55 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-----GIILTRDGRFKVTDDGSLV 115 STG D AL+ +FA+ + TR G F++ D+G+L Sbjct: 56 VQDAEKIYTPSGTKSTGVAYDMALKDHGFFAVSNKTSTGTSETYYTRAGNFRMGDNGTLQ 115 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 A G S N + +IAT + + + + Sbjct: 116 DAGGNEVQGWAMSPIT--ADDIVSTNANVNVFTNDYSNLIATDIIKHGTYIESYSAKMTD 173 Query: 176 GISPNIPPTPLEDLSGVTVKRGF 198 N V+V G+ Sbjct: 174 FDQVN-------KGDDVSVYSGY 189 Score = 62.6 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 12/91 (13%), Positives = 31/91 (34%), Gaps = 4/91 (4%) Query: 153 KVIATMGLYSVDMSQGFVRRENSG----ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMY 208 +I + + + +G + ++ P + + + G LE S AN Sbjct: 690 FIIGQVSVALFNNERGLLAVGDNLLKKTTESGEPTYNINNDRTSEIAGGNLELSGANLSE 749 Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + ++ + F + I + + I+ Sbjct: 750 SLVNLMVFQRAFEANAKSITTADALLTTLIQ 780 >gi|119775450|ref|YP_928190.1| flagellar hook protein FlgE [Shewanella amazonensis SB2B] gi|119767950|gb|ABM00521.1| flagellar hook protein FlgE [Shewanella amazonensis SB2B] Length = 453 Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 41/184 (22%), Positives = 74/184 (40%), Gaps = 5/184 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61 SFNI L+ A ++ L+T A+N++N +T GF+ + +F++V A N Q V + Sbjct: 2 SFNIALSGIAAAQKDLNTTANNIANVNTTGFKESRAEFADVYAASIFSNSKTQVGGGVTT 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII---LTRDGRFKVTDDGSLVSAS 118 + GS T LD A+ G +F + TR G FKV + LV ++ Sbjct: 62 TQVAQQFHQGSLQFTSNALDLAISGGGFFVTSADPSARDYSFTRAGAFKVDSNNYLVDSA 121 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178 G + + + V+ ++++ G ++ + Sbjct: 122 GNFLQTFPVDKFGNSTSVSLTTTRPVQIPDTAGSPVMTENVGVQMNLNAGEKTKDPAAFD 181 Query: 179 PNIP 182 P+ P Sbjct: 182 PDDP 185 Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 12/91 (13%), Positives = 29/91 (31%), Gaps = 5/91 (5%) Query: 154 VIATMGLYSVDMSQGFVRRENSGISP-----NIPPTPLEDLSGVTVKRGFLEDSNANSMY 208 + + L QG + N+ + ++ LE SN + Sbjct: 361 PLGRVALVRFANEQGLTQVGNTSWKESLASGTALAGEANSGTFGAIRSAALEQSNVDLTT 420 Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E+ +I + F + + ++ N ++ Sbjct: 421 ELVDLISAQRNFQANSRTLEVNNTLQQTILQ 451 >gi|225850267|ref|YP_002730501.1| flagellar basal body and hook protein FlgE [Persephonella marina EX-H1] gi|225644919|gb|ACO03105.1| flagellar basal body and hook protein FlgE [Persephonella marina EX-H1] Length = 540 Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 35/163 (21%), Positives = 65/163 (39%), Gaps = 8/163 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M SF G A A + LS ++DN++N +T+GF+ +V F +++ + Sbjct: 1 MIQSFYTGNAGLNANKNWLSVISDNIANVNTIGFKAERVNFEDLISSSLTTFANNSPKNM 60 Query: 56 --ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDG 112 G G+ ++T T D AL+G+ +F + + TR G+F+ +G Sbjct: 61 EIGGGSFVGSTTKDFSQGALMNTNTPTDLALDGEGFFMVRDAQDVTYYTRAGQFRTDANG 120 Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI 155 L++ +G + I N+ K+ Sbjct: 121 DLINLNGMKLLGWQLDDAGNIAGAIGAINIPNDMPPHVTTKLA 163 Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 35/87 (40%), Gaps = 3/87 (3%) Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPTPL---EDLSGVTVKRGFLEDSNANSMYEMGQ 212 A + + + + + +R+ N+ PN ++ GFLE SN + E Sbjct: 451 ARIAIATFNDKEILIRKGNNLFLPNSQTYTPIIVPGGVISKIRGGFLELSNVDISREFIN 510 Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIR 239 +I + + + I +++ + E + Sbjct: 511 LITAQRAYQANARTITTSDQVLQETMN 537 >gi|149174025|ref|ZP_01852653.1| flagellar basal-body rod protein FlgG [Planctomyces maris DSM 8797] gi|148847005|gb|EDL61340.1| flagellar basal-body rod protein FlgG [Planctomyces maris DSM 8797] Length = 542 Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 38/219 (17%), Positives = 75/219 (34%), Gaps = 19/219 (8%) Query: 14 ALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----------ISFVASGK 63 AL + +N++N T+GF+ + V+F + + + Sbjct: 274 ALRLSRDVIVNNIANAGTIGFKRLYVEFESLPYEYVKTPASEEAETEPPIAVGMGSQVLQ 333 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV--SASGKY 121 +S+ G + TG ELD A+EG + + TR GR +D L + Y Sbjct: 334 TRISQTSGELLKTGRELDIAIEGQGFLQVRLGETTAFTRTGRLIFDEDRRLCIRGSQHNY 393 Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGK--VIATMGLYSVDMSQGFVRRENSGISP 179 ++ +P + + ++ + + + + RE+ + Sbjct: 394 LIVPEIKLPAEAHSIQISESGIVTALLADVAEEVTVGELQIACFTDPSELFPRESCLFTT 453 Query: 180 NIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQM 213 L+ V+ G LE SN + E+ Q+ Sbjct: 454 TPRAGAARVLTPGAKGAGLVRSGVLEASNVSITEELEQL 492 >gi|57504594|ref|ZP_00370706.1| flagellar hook protein FlgE [Campylobacter coli RM2228] gi|57019489|gb|EAL56183.1| flagellar hook protein FlgE [Campylobacter coli RM2228] Length = 845 Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 59/183 (32%), Gaps = 14/183 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G++ A + + +N+SN +T GF+ + F + Sbjct: 1 MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTKGFKYSRADFGTMFSQTVKIATAPTDGRG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106 ++ Q V+ G +T D A+ GD +F + LTRDG F Sbjct: 61 GSNPLQIGLGVSVSSTTRIHSQGPVQTTNKNTDVAINGDGFFMVSDDGGLTRYLTRDGDF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 K+ G+ V+ +G + Q +T +++ Sbjct: 121 KLDAYGNFVNNAGFVVQGWNINWDNQTIDSSRSPQNIFIDPGMHIPAAKSTEVAIKANLN 180 Query: 167 QGF 169 G Sbjct: 181 SGL 183 Score = 73.4 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 17/144 (11%), Positives = 46/144 (31%), Gaps = 5/144 (3%) Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 T + S + +G+ + + + + K +A + + Sbjct: 699 TSGSNDGLVSSNSASTLTGQATDGYTSGNLKPDAIRVDDKGNILGEFTNGKTFAVAKIAM 758 Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIH 215 SV + G + + T +K LE SN + + ++I Sbjct: 759 ASVANNSGLEEIGGNLFKVTANSGAIVVGEAGTGGRGEMKTSALEMSNVDLSRSLTELII 818 Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239 + + + + + I +++ + I+ Sbjct: 819 IQRGYQANSKTISTSDQMLQTLIQ 842 >gi|86356330|ref|YP_468222.1| flagellar hook protein FlgE [Rhizobium etli CFN 42] gi|86280432|gb|ABC89495.1| flagellar hook protein [Rhizobium etli CFN 42] Length = 434 Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 43/183 (23%), Positives = 74/183 (40%), Gaps = 10/183 (5%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 S ++ A RLSTV+DN++N +T G++ + FS +V + V + Sbjct: 6 SMKTAVSGMNAQANRLSTVSDNIANVNTTGYKAVSTSFSSLVLPSSGG-NYNSGGVQTSV 64 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGKYP 122 + G T + D A+ GD +F ++ P G +LTR G F+ D+G+LV+A+G Sbjct: 65 RQAVSDQGDISYTTSTTDLAISGDGFFIVQGPDGTPVLTRAGDFQKDDEGNLVNAAGFQL 124 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + V G + GL ++ + G + + P Sbjct: 125 MGYSYDS--------GAPAVVVNGFDGLVPVNVNQEGLTAIASTSGVFKGNLDSGANIAP 176 Query: 183 PTP 185 P Sbjct: 177 VAP 179 Score = 74.1 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 17/121 (14%), Positives = 35/121 (28%), Gaps = 1/121 (0%) Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178 + V I + + + + + G V N Sbjct: 312 NGQAASPVKDVTIDGDGIVYAKYEDGSTKPLYRIPLANVASPDKLTLMSGNVYSANGQSG 371 Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 + P + T+K G LE SN + E+ +MI + + + + + M + Sbjct: 372 VTVTGFPQTNG-LGTIKSGALEGSNVDLAGELTEMIEAQRSYTANSKVFQTGSDIMDVLV 430 Query: 239 R 239 Sbjct: 431 N 431 >gi|319790416|ref|YP_004152049.1| flagellar hook-basal body protein [Thermovibrio ammonificans HB-1] gi|317114918|gb|ADU97408.1| flagellar hook-basal body protein [Thermovibrio ammonificans HB-1] Length = 522 Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 34/162 (20%), Positives = 64/162 (39%), Gaps = 8/162 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-------D 53 M SF A ++ LS ++DN++N +TVGF+ + F +++ Sbjct: 1 MLQSFYTAFTGLTADKRWLSIISDNIANVNTVGFKAERAVFEDLLARSLTTFKNGAPVNT 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDG 112 + V G+F++T LD AL+G+ +F + +G TR+G F++ +G Sbjct: 61 EIGGGVFVSATVKDFSQGTFMNTNNPLDLALDGEGFFMVRDNQGLTYYTRNGEFRLDANG 120 Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV 154 L++ G M + V + + Sbjct: 121 DLINMLGMKVQGWMLDDNGNMAGAISNITVPMSMDPKVTKNI 162 Score = 75.7 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 36/88 (40%), Gaps = 3/88 (3%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTP---LEDLSGVTVKRGFLEDSNANSMYEMG 211 IA + + + + VR+ + PN+ + V+ G LE SN + E Sbjct: 432 IARLAIATFKDKEMLVRKGSWLYVPNVQTFTPVIMPGGVISKVRSGMLEMSNVDIANEFI 491 Query: 212 QMIHLTQKFNSITTLIDENEKSMLEAIR 239 +I + + + +I +++ + E + Sbjct: 492 NLITAQRSYQANARVITTDDQILQETMN 519 >gi|327398496|ref|YP_004339365.1| flagellar hook-basal body protein [Hippea maritima DSM 10411] gi|327181125|gb|AEA33306.1| flagellar hook-basal body protein [Hippea maritima DSM 10411] Length = 589 Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 62/175 (35%), Gaps = 12/175 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK------NDIDQ 54 M + + + ++ +N++N +T+G++ + F+ ++ + + Q Sbjct: 1 MIRALYTSSNGLFEQQLGVDSITNNIANVNTIGYKKTRPTFASLLYQTQKLGMPGENPMQ 60 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-----ILTRDGRFKVT 109 V G+ I+ + D A+EG +F L P + TR G F Sbjct: 61 IGLGVKLQSTDTIMSEGTLITGNKDTDLAIEGKGFFTLLDPSSKDSASYLFTRAGDFSFD 120 Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 DG+LV+ +G V + Q I G + + I V Sbjct: 121 ADGNLVNPNGYMVVGW-LAEQSQQGTGYYIPEDPTTGLPTGTIQPINISSYEDVP 174 Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 15/139 (10%), Positives = 37/139 (26%), Gaps = 12/139 (8%) Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172 + + + D + I + + IA + + QG R Sbjct: 448 FAMDSDTSFQDQDGSHSGILQKVFVDRDGNIMGTYSNGNSYSIAKLAISKFMNPQGLKRE 507 Query: 173 ENSGISPNIPPTPLE------------DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 + + + + LE SN + +I + F Sbjct: 508 GKTMFKTTPNADSEDVLSSYGFIGVANEGGRGMILSNHLEASNVDLGEAFVNLIEYQRGF 567 Query: 221 NSITTLIDENEKSMLEAIR 239 + + + ++ + AI+ Sbjct: 568 EANSKGVTTADQLLQTAIQ 586 >gi|330502734|ref|YP_004379603.1| flagellar hook protein FlgE [Pseudomonas mendocina NK-01] gi|328917020|gb|AEB57851.1| flagellar hook protein FlgE [Pseudomonas mendocina NK-01] Length = 456 Score = 92.6 bits (228), Expect = 5e-17, Method: Composition-based stats. Identities = 39/186 (20%), Positives = 70/186 (37%), Gaps = 6/186 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61 SFNIGL+ A L+ +N++N T GF+ + +F+++ + + + S V Sbjct: 2 SFNIGLSGLRAATSDLNVTGNNIANAGTAGFKQSRAEFADLYASSMLGTGKNPQGSGVLL 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 G+ T LD A+ G+ +F + + TR G F DG +V+ G Sbjct: 62 ADVAQLFNQGNINYTQNALDMAINGNGFFMTSNNGEMSYTRSGYFGTDRDGYIVNNFGYR 121 Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 A I V + + + ++++ VR N+G Sbjct: 122 LQGYAADDSGNILPVQSDLRVSAGQQEPKATTTVTQ----RINLNSNAVRPANAGTMAAP 177 Query: 182 PPTPLE 187 P + Sbjct: 178 TFDPSD 183 Score = 64.9 bits (156), Expect = 9e-09, Method: Composition-based stats. Identities = 25/200 (12%), Positives = 53/200 (26%), Gaps = 10/200 (5%) Query: 45 VGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDG 104 + + + + +G + E D G G Sbjct: 260 LASTPPNPALDAPAIPTGTPNGIFALAEADWVPAEKDPVNPGTMVANGADSEAFTFDMRG 319 Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 + V+A + I++ IF G+ +G+V+ L + Sbjct: 320 STQYAAS-FGVNAVSQDGYTTGQLAGIEVDDTGIIFARYTNGQSKVQGQVL----LANFA 374 Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQK 219 QG + + + ++ G LEDSN ++ +I + Sbjct: 375 NVQGLSPVGKTAWVQSFESGEPVIGTPRSSTLGALQAGALEDSNVELSDQLVNLIVAQRN 434 Query: 220 FNSITTLIDENEKSMLEAIR 239 + + I+ I Sbjct: 435 YQANAKTIETESAITQTIIN 454 >gi|299531286|ref|ZP_07044696.1| flagellar hook protein FlgE [Comamonas testosteroni S44] gi|298720693|gb|EFI61640.1| flagellar hook protein FlgE [Comamonas testosteroni S44] Length = 422 Score = 92.6 bits (228), Expect = 5e-17, Method: Composition-based stats. Identities = 38/193 (19%), Positives = 66/193 (34%), Gaps = 7/193 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN--DIDQKISFVAS 61 F GL+ A + L + N++N++T GF+ + F+E+V + V Sbjct: 2 GFQQGLSGLNAASKNLDVIGHNIANSNTTGFKASRADFAEMVASAIGSASGQSSGIGVNV 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASGK 120 GS STG LD A+ G+ +F ++ I TR G F + +G+L + Sbjct: 62 ASVSQQFRQGSITSTGNNLDIAINGNGFFVVKQSDGSIAYTRAGNFGLDKEGNLKTVDND 121 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 + + Q G+ I V++ R + Sbjct: 122 NVMGYVVDPSTGKIQSGATPVPMSF----PTGQPIPAKQTSKVNVELNLDARATAAAGDA 177 Query: 181 IPPTPLEDLSGVT 193 P+ T Sbjct: 178 TATPPVAATPRAT 190 Score = 78.4 bits (191), Expect = 9e-13, Method: Composition-based stats. Identities = 13/89 (14%), Positives = 32/89 (35%), Gaps = 5/89 (5%) Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEM 210 + L + +QG N+ P + + +++ G LE+SN + E+ Sbjct: 332 GQIALAAFTNTQGLGSIGNNKWVATSDSGPALNGSAQTGTFGSLQSGALEESNVDLTAEL 391 Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIR 239 M+ + + + I ++ + Sbjct: 392 VNMMTAQRSYQANAQTIKTQDQVFSTLVN 420 >gi|289670506|ref|ZP_06491581.1| flagellar hook protein FlgE [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 142 Score = 92.6 bits (228), Expect = 5e-17, Method: Composition-based stats. Identities = 29/128 (22%), Positives = 57/128 (44%), Gaps = 2/128 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--ISFVAS 61 FN L+ A L+ ++N++N +T GF+ + +F+++ + + + S V Sbjct: 2 GFNTSLSGINAANADLNVTSNNIANVNTTGFKESRAEFADMFQSTSYGLSRNAVGSGVRV 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 G+ TG LD A+ G+ +F + S + TR G F+ +G +V+ G Sbjct: 62 SNVAQQFSQGNIDPTGRSLDLAISGEGFFTVSSNGAKMYTRAGNFQTDANGYVVNPQGAR 121 Query: 122 PVLDMASV 129 + + Sbjct: 122 LQVFAPNP 129 >gi|229090715|ref|ZP_04221948.1| Flagellar hook protein FlgE [Bacillus cereus Rock3-42] gi|228692657|gb|EEL46383.1| Flagellar hook protein FlgE [Bacillus cereus Rock3-42] Length = 437 Score = 92.6 bits (228), Expect = 5e-17, Method: Composition-based stats. Identities = 36/222 (16%), Positives = 71/222 (31%), Gaps = 20/222 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49 M + + A + LS ++N++N TVG++ K F +++ Sbjct: 1 MIKALYTSITGMNAAQNALSVTSNNIANAQTVGYKKQKAIFDDLLYNNTVGSRGDGAYAG 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF--ALESPRGIILTRDGRFK 107 + + V GS T +++ A+EG+ F + + TR G F Sbjct: 61 TNPKSIGNGVKFSGTSTDFSDGSITLTSDKMETAIEGNGLFLVGDRNGGNVEYTRKGSFS 120 Query: 108 VTDDGSLVSASGKYPVL-------DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 V+ D + + G+Y + + G + K + + Sbjct: 121 VSKDSYVTNTGGQYVLGYGVKTGTQEVDFSSRPSPIHIPMGSAVGGIQTDKATIGGNLPR 180 Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDS 202 +S F + G S + + TV +E Sbjct: 181 NQNALSHEFTVFDAEGNSLTLRVNIKQKTESETVDGKVVEKP 222 Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 18/144 (12%), Positives = 40/144 (27%), Gaps = 9/144 (6%) Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 G +S + + I + G + KV+ + + + Sbjct: 298 SGLTNYPTGKTLSTTEVTGRPAAIANDYSISDGGFVMMKYSDGSM----KVVGQLAVATF 353 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 S G ++ N V+ E SN + E ++ + Sbjct: 354 PNSGGLMKTGNGNYVATPSAGIPGIGVAGENGAGNVRGSAKESSNVDLSVEFVDLMLYQR 413 Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242 F +I +++ + E + I Sbjct: 414 GFQGNAKVIKVSDEVLNEVVNLIR 437 >gi|217077695|ref|YP_002335413.1| flagellar hook protein FlgE [Thermosipho africanus TCF52B] gi|217037550|gb|ACJ76072.1| flagellar hook protein FlgE [Thermosipho africanus TCF52B] Length = 704 Score = 92.6 bits (228), Expect = 5e-17, Method: Composition-based stats. Identities = 39/188 (20%), Positives = 70/188 (37%), Gaps = 14/188 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G+ +Q + V +N++N T+GF+ +V ++ + Sbjct: 1 MIRSIYSGVTGLQGFQQAIDVVGNNIANVSTIGFKASRVTYATTFSQVLELSKRATELTG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFK 107 + Q V GSF +TG + D A++GD +F L+ I TR G F Sbjct: 61 GTNPKQIGYGVKVASIDKIMSQGSFQNTGKKTDLAIQGDGFFILKDGSGKIYYTRAGNFD 120 Query: 108 VTDDGSLVS-ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 + +G+LV +SG +A + ++ N G +A + ++ Sbjct: 121 LDVNGTLVQASSGLKLQGWVAEPDPESGKRFVDTNKPISDIQISAGLSMAAKKTSYMTVA 180 Query: 167 QGFVRREN 174 R Sbjct: 181 NNLDARVG 188 Score = 82.6 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 13/129 (10%), Positives = 37/129 (28%), Gaps = 5/129 (3%) Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 ++ + + + + + L + G + NS Sbjct: 573 TSDAYVTEQNGNAQGTLESFSIAENGDIIGTFSNGLTDKLGKVALAIFNNPAGLLEAGNS 632 Query: 176 GISPNIPP-----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + + ++ G LE SN + E ++I + F + ++ Sbjct: 633 LYTESANSGGAIIRQPGFGGSGSLISGALEMSNVDLSEEFTKLIIAQRGFQANARVVTTA 692 Query: 231 EKSMLEAIR 239 ++ + E + Sbjct: 693 DQILQEVVN 701 >gi|317129200|ref|YP_004095482.1| flagellar hook-basal body protein [Bacillus cellulosilyticus DSM 2522] gi|315474148|gb|ADU30751.1| flagellar hook-basal body protein [Bacillus cellulosilyticus DSM 2522] Length = 397 Score = 92.2 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 30/136 (22%), Positives = 56/136 (41%), Gaps = 12/136 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK----- 55 M + G+ + + +L V +N++N +T GF+ +V F ++V + Sbjct: 1 MIRAMYAGIGGMKSFQTKLDVVGNNIANVNTSGFKKGRVTFQDLVSQQMSGAATPTDNRG 60 Query: 56 -------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 + G GS +TG +LD + GD +F + +R G F + Sbjct: 61 GINPMQVGLGTSMGSIDTIHTQGSLQTTGRDLDIGITGDGFFIVNDGGQSYYSRAGNFYL 120 Query: 109 TDDGSLVSASGKYPVL 124 ++G LV+A+G Sbjct: 121 DENGDLVNANGLRVQG 136 Score = 76.1 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 36/92 (39%), Gaps = 5/92 (5%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSM 207 +++ + L + + G + N+ + + D + LE SN + Sbjct: 303 RLLGQIALATFNNPGGLSKSGNNLYMVSNNSGNPQVGLAGDGGRGMLTGASLEMSNVDLS 362 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E +MI + F + T +I +++ + E + Sbjct: 363 EEFTEMIVAQRGFQANTRMITTSDEILQELVN 394 >gi|218902868|ref|YP_002450702.1| putative flagellar hook protein FlgE [Bacillus cereus AH820] gi|218535884|gb|ACK88282.1| putative flagellar hook protein FlgE [Bacillus cereus AH820] Length = 437 Score = 92.2 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 36/222 (16%), Positives = 71/222 (31%), Gaps = 20/222 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49 M + + A + LS ++N++N TVG++ K F +++ Sbjct: 1 MIKALYTSITGMNAAQNALSVTSNNIANAQTVGYKKQKAIFDDLLYNNTVGSRGDGAYAG 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF--ALESPRGIILTRDGRFK 107 + + V GS T +++ A+EG+ F + + TR G F Sbjct: 61 TNPKSIGNGVKFSGTSTDFSDGSITLTSDKMETAIEGNGLFLVGDRNAGNVEYTRKGSFG 120 Query: 108 VTDDGSLVSASGKYPVL-------DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 V+ D + + G+Y + + G + K + + Sbjct: 121 VSKDNYVTTTGGQYVLGYGVKTGTQEIDFSSRPSPIHIPMGSAVGGIQTDKATIGGNLPR 180 Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDS 202 +S F + G S + + TV +E Sbjct: 181 NQNALSHEFTVFDAEGNSLTLRVNIKQKTESETVDGKVVEKP 222 Score = 69.5 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 18/144 (12%), Positives = 40/144 (27%), Gaps = 9/144 (6%) Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 G +S + + I + G + KV+ + + + Sbjct: 298 SGLTNYPTGKTLSTTEVTGRPAAIANDYSISDGGFVMMKYSDGSM----KVVGQLAVATF 353 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 S G ++ N V+ E SN + E ++ + Sbjct: 354 PNSGGLMKTGNGNYVATPSAGIPGIGVAGENGAGNVRGSAKESSNVDLSVEFVDLMLYQR 413 Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242 F +I +++ + E + I Sbjct: 414 GFQGNAKVIKVSDEVLNEVVNLIR 437 >gi|52143704|ref|YP_083124.1| flagellar hook protein FlgE [Bacillus cereus E33L] gi|228926789|ref|ZP_04089857.1| Flagellar hook protein FlgE [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229121305|ref|ZP_04250536.1| Flagellar hook protein FlgE [Bacillus cereus 95/8201] gi|51977173|gb|AAU18723.1| flagellar hook protein [Bacillus cereus E33L] gi|228662150|gb|EEL17759.1| Flagellar hook protein FlgE [Bacillus cereus 95/8201] gi|228832902|gb|EEM78471.1| Flagellar hook protein FlgE [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 437 Score = 92.2 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 36/222 (16%), Positives = 71/222 (31%), Gaps = 20/222 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49 M + + A + LS ++N++N TVG++ K F +++ Sbjct: 1 MIKALYTSITGMNAAQNALSVTSNNIANAQTVGYKKQKAIFDDLLYNNTVGSRGDGAYAG 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF--ALESPRGIILTRDGRFK 107 + + V GS T +++ A+EG+ F + + TR G F Sbjct: 61 TNPKSIGNGVKFSGTSTDFSDGSITLTSDKMETAIEGNGLFLVGDRNAGNVEYTRKGSFG 120 Query: 108 VTDDGSLVSASGKYPVL-------DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 V+ D + + G+Y + + G + K + + Sbjct: 121 VSKDNYVTTTGGQYVLGYGVKTGTQEIDFSSRPSPIHIPMGSAVGGIQTDKATIGGNLPR 180 Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDS 202 +S F + G S + + TV +E Sbjct: 181 NQNALSHEFTVFDAEGNSLTLRVNIKQKTESETVDGKVVEKP 222 Score = 69.5 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 18/144 (12%), Positives = 40/144 (27%), Gaps = 9/144 (6%) Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 G +S + + I + G + KV+ + + + Sbjct: 298 SGLTNYPTGKTLSTTEVTGRPAAIANDYSISDGGFVMMKYSDGSM----KVVGQLAVATF 353 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 S G ++ N V+ E SN + E ++ + Sbjct: 354 PNSGGLMKTGNGNYVATPSAGIPGIGVAGENGAGNVRGSAKESSNVDLSVEFVDLMLYQR 413 Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242 F +I +++ + E + I Sbjct: 414 GFQGNAKVIKVSDEVLNEVVNLIR 437 >gi|258592496|emb|CBE68805.1| putative Flagellar hook protein flgE [NC10 bacterium 'Dutch sediment'] Length = 412 Score = 92.2 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 30/142 (21%), Positives = 60/142 (42%), Gaps = 12/142 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 ++F+ + A + L + +N++N +T G++ + +FSE++ Sbjct: 1 MSTFSTAITGLKAYQTDLGVIGNNIANANTTGYKASRAQFSELLVQTIEGATPPSDSTGG 60 Query: 54 ----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109 Q + V G + G+ TG D A++G+ ++ L + I TR G F++ Sbjct: 61 IDPMQIGAGVIVGGILNIQTQGAIEPTGRSSDLAIQGEGFYVLSNGESQIYTRVGSFELD 120 Query: 110 DDGSLVSASGKYPVLDMASVPI 131 +G+LV A V + Sbjct: 121 ANGNLVDAGTGLKVQGIDGDIH 142 Score = 76.1 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 21/163 (12%), Positives = 42/163 (25%), Gaps = 6/163 (3%) Query: 86 GDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEK 145 G F ++ + S P + + Sbjct: 250 GGGIFTFNPGNAAASAQEFSIDFDALTGFAALSSVSMKQQDGVPPGSLTSFTVSNDGMVN 309 Query: 146 GEISQK-GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFL 199 G S + T+ L S G +R N + + T+ G L Sbjct: 310 GIYSNGLVTEMDTLKLASFSNPAGLLRLANGQFAETPNSGVAQYGVAGTGGRGTIVAGAL 369 Query: 200 EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 E SN + E+ +I + + + +I + + + Sbjct: 370 EQSNVDLGTELVNLIIAQRGYEANAQVISVANQIQQTTLNLLR 412 >gi|241203124|ref|YP_002974220.1| flagellar hook protein FlgE [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857014|gb|ACS54681.1| protein of unknown function DUF1078 domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 432 Score = 92.2 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 44/183 (24%), Positives = 73/183 (39%), Gaps = 10/183 (5%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 S ++ A RLSTVADN++N +T G++ + FS +V + V + Sbjct: 6 SMKTAVSGMNAQANRLSTVADNIANVNTTGYKAVSTSFSSLVLPSSGG-NYNSGGVQTSV 64 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGKYP 122 + G T + D A+ GD +F ++ P G +LTR G F D+G+LV+A+G Sbjct: 65 RQAVSDQGDISYTTSSTDLAISGDGFFIVQGPDGTPVLTRAGDFTKDDEGNLVNAAGFML 124 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + V G + GL ++ + G + + P Sbjct: 125 MGYSY--------DSGSPAVVVNGFDGLVPVNVNQDGLTAIASTSGIFKGNLDSNAKIAP 176 Query: 183 PTP 185 P Sbjct: 177 VAP 179 Score = 72.2 bits (175), Expect = 6e-11, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 30/87 (34%), Gaps = 1/87 (1%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQ 212 + + + G V N + P + T+K G LE SN + E+ + Sbjct: 344 PLANVASPDKLTLMSGNVYSANGQSGVTVTGFPQTNG-LGTIKSGALEGSNVDLAGELTE 402 Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIR 239 MI + + + + + M + Sbjct: 403 MIESQRSYTANSKVFQTGSDIMDVLVN 429 >gi|188588515|ref|YP_001920211.1| flagellar hook protein FlgE [Clostridium botulinum E3 str. Alaska E43] gi|188498796|gb|ACD51932.1| flagellar hook protein FlgE [Clostridium botulinum E3 str. Alaska E43] Length = 364 Score = 92.2 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 60/161 (37%), Gaps = 37/161 (22%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50 M S G++ A + +L + +N++N T GF++ +F++++ + Sbjct: 1 MLRSMYSGISGMKANQVKLDVIGNNIANVSTTGFKSSSARFTDMLYQNTSSATAPTSTKG 60 Query: 51 --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP------------- 95 + Q G+ +STG LD ++GD + + + Sbjct: 61 GTNAKQVGLGAQLASINKVMGQGNALSTGRSLDVCIDGDGYLIVGTGPTSYGGDDGTKGG 120 Query: 96 ------------RGIILTRDGRFKVTDDGSLVSASGKYPVL 124 I+ TRDG + +G+L++A G + Sbjct: 121 TSIVNGSISGGDMDILYTRDGNLTLDHEGNLLTADGYRVMG 161 Score = 76.1 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 13/96 (13%), Positives = 30/96 (31%), Gaps = 12/96 (12%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTP------------LEDLSGVTVKRGFLEDS 202 + + + S +G + + + P +G LE S Sbjct: 265 LGQVAMGSFKNPEGLTSVGGNLLEASSNSGPVIVKTSTGTTDGDNSKGFGDFIQGALEAS 324 Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 N + + MI T+ F + + +I ++ + Sbjct: 325 NVDLTEQFTDMITATRAFQASSKMISTADEILQTIT 360 >gi|127512279|ref|YP_001093476.1| flagellar hook protein FlgE [Shewanella loihica PV-4] gi|126637574|gb|ABO23217.1| flagellar basal body FlaE domain protein [Shewanella loihica PV-4] Length = 453 Score = 92.2 bits (227), Expect = 6e-17, Method: Composition-based stats. Identities = 43/184 (23%), Positives = 75/184 (40%), Gaps = 5/184 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61 SFNI L+ A ++ L+T A+N++N +T GF+ + +F++V + N V + Sbjct: 2 SFNIALSGIAAAQKDLNTTANNIANVNTTGFKESRAEFADVYASSIFANSKTTVGGGVTT 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESP---RGIILTRDGRFKVTDDGSLVSAS 118 + + GS T LD A+ G +F S + + TR G FKV D LV+++ Sbjct: 62 AQVAQQFQQGSLQFTSNALDMAINGGGFFVTSSEVGSQDLSYTRAGAFKVDADSYLVNSA 121 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178 G Y K + ++++ G + + + Sbjct: 122 GNYLQTFPVDKDGNSTSVSLTTTQPVKIPDTAGSPQKTDNIGIQMNLNAGEGTLDPANFN 181 Query: 179 PNIP 182 PN P Sbjct: 182 PNDP 185 Score = 68.4 bits (165), Expect = 8e-10, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 34/91 (37%), Gaps = 5/91 (5%) Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMY 208 +A + L QG + N+ ++ P + +++ LE SN + Sbjct: 361 PLARVALARFSNEQGLTQVGNTSWKESLDSGPALAGEANSGTFGSIRSSALEQSNVDLTT 420 Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E+ +I + F + + ++ N ++ Sbjct: 421 ELVDLISAQRNFQANSRTLEVNNTLQQTVLQ 451 >gi|325982371|ref|YP_004294773.1| fagellar hook-basal body protein [Nitrosomonas sp. AL212] gi|325531890|gb|ADZ26611.1| fagellar hook-basal body protein [Nitrosomonas sp. AL212] Length = 423 Score = 92.2 bits (227), Expect = 6e-17, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 63/195 (32%), Gaps = 4/195 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID----QKISFV 59 F GL+ A L V +N++N +TVG++ + +F+++ + Q Sbjct: 2 GFQQGLSGLSAASTNLDVVGNNIANVNTVGYKQSQAQFTDIFANSLDGAGSSRTQVGIGA 61 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119 G T LD A+ G +F + I +R+G+F++ +G L ASG Sbjct: 62 RVATVAQLFNQGDIAPTNNPLDIAINGQGFFRMSDNGVISYSRNGQFRLDGNGFLTDASG 121 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 I +IS + +G + + Sbjct: 122 INLTGYAPDANGNINTGQATNLKLNTTDISPRVTSTFNLGFNLPSNADAPAVTTFDANNT 181 Query: 180 NIPPTPLEDLSGVTV 194 + ++ Sbjct: 182 QSFNEKKSGVFFDSL 196 Score = 71.1 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 15/130 (11%), Positives = 37/130 (28%), Gaps = 6/130 (4%) Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ-KGKVIATMGLYSVDMSQGFVRREN 174 S G ++ +G S + K + + L S QG + Sbjct: 293 SQFGINLAQSDGYASGRLAGFTTSPEGIIQGNYSNGQNKTLGQVVLASFVNPQGLNPIGD 352 Query: 175 SGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 + ++ +E +N + E+ +MI + + + I+ Sbjct: 353 GRWIETPSSGQPLVGEPNSGTLGVLQASAVESANVDLTSELVKMITAQRMYQANAKTIET 412 Query: 230 NEKSMLEAIR 239 + + + Sbjct: 413 QDAILQTLVN 422 >gi|264676570|ref|YP_003276476.1| FlgE [Comamonas testosteroni CNB-2] gi|262207082|gb|ACY31180.1| FlgE [Comamonas testosteroni CNB-2] Length = 422 Score = 92.2 bits (227), Expect = 6e-17, Method: Composition-based stats. Identities = 38/193 (19%), Positives = 66/193 (34%), Gaps = 7/193 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN--DIDQKISFVAS 61 F GL+ A + L + N++N++T GF+ + F+E+V + V Sbjct: 2 GFQQGLSGLNAASKNLDVIGHNIANSNTTGFKASRADFAEMVASAIGSASGQSSGIGVNV 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASGK 120 GS STG LD A+ G+ +F ++ I TR G F + +G+L + Sbjct: 62 ASVSQQFRQGSITSTGNNLDIAINGNGFFVVKQSDGSIAYTRAGNFGLDKEGNLKTVDND 121 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 + + Q G+ I V++ R + Sbjct: 122 NVMGYVVDPSTGKIQSGATPVPMSF----PTGQPIPAKQTSKVNVELNLDARATAAAGDA 177 Query: 181 IPPTPLEDLSGVT 193 P+ T Sbjct: 178 TATPPVAATPRAT 190 Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 13/89 (14%), Positives = 32/89 (35%), Gaps = 5/89 (5%) Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEM 210 + L + +QG N+ P + + +++ G LE+SN + E+ Sbjct: 332 GQIALAAFTNTQGLGSIGNNKWVATSDSGPALNGSAQTGTFGSLQSGALEESNVDLTAEL 391 Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIR 239 M+ + + + I ++ + Sbjct: 392 VNMMTAQRSYQANAQTIKTQDQVFSTLVN 420 >gi|194365680|ref|YP_002028290.1| flagellar hook protein FlgE [Stenotrophomonas maltophilia R551-3] gi|194348484|gb|ACF51607.1| flagellar basal body FlaE domain protein [Stenotrophomonas maltophilia R551-3] Length = 407 Score = 92.2 bits (227), Expect = 6e-17, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 56/129 (43%), Gaps = 2/129 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVAS 61 FN+ L+ A LS A+N++N +T GF+ + +F+++ A + + S V Sbjct: 2 GFNVSLSGINAANSDLSVTANNVANVNTTGFKESRAEFADLFSATGYGLSKNAVGSGVRV 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 + G TG LD A+ G+ +F + + +R G F+ G +++ G Sbjct: 62 SNVAQQFKQGHNEQTGRSLDMAISGEGFFTMNMNGTRVYSRAGNFQTDPSGYVINPQGAR 121 Query: 122 PVLDMASVP 130 + + Sbjct: 122 LQVFAPNAD 130 Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 31/92 (33%), Gaps = 5/92 (5%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSM 207 K + + L + + QG + N+ + ++ G LE S + Sbjct: 314 KPLGQVALTTFNNPQGLESKGNNLWVDTFSSGTPRTGMPDTSNLGKIQAGSLEASTVDLT 373 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 ++ MI + F + +I ++ I Sbjct: 374 EQLVNMITAQRNFQANAQMITTQDQITQTVIN 405 >gi|196033292|ref|ZP_03100704.1| putative flagellar basal-body rod protein [Bacillus cereus W] gi|195993726|gb|EDX57682.1| putative flagellar basal-body rod protein [Bacillus cereus W] Length = 249 Score = 92.2 bits (227), Expect = 6e-17, Method: Composition-based stats. Identities = 42/246 (17%), Positives = 85/246 (34%), Gaps = 15/246 (6%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DIDQKISFVASG 62 + QR++ ++N++N T GF+ + + +I V Sbjct: 2 GMMNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIGSVDYAVVPA 61 Query: 63 KEYLSKEVGSFISTGTELDFALEGDA-----WFALESPRGIILTRDGRFKVTDDGSLVSA 117 +++ G+ T + DF L+ +F LTRDG F + D L + Sbjct: 62 ATHVNLVQGNIQMTNSATDFFLDDGTAGTASFFVTSKNNETFLTRDGSFTLNSDRYLQTT 121 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV--DMSQGFVRRENS 175 SG + + + + IA + +V + + ++REN Sbjct: 122 SGAFVMGENNERIRIPEGAKVAVQADGTLYDAVTQNNIARLQTKTVGAEANNRLMQRENK 181 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 + + TVK LE+SN + EM ++ + ++ ++ +K Sbjct: 182 SFTLAEGNSADLPNGVGTVKNYMLENSNVDMTKEMADLMTDQKMISASQRVMTSFDKIYE 241 Query: 236 EAIRNI 241 + I Sbjct: 242 KEANEI 247 >gi|262273529|ref|ZP_06051343.1| flagellar hook protein FlgE [Grimontia hollisae CIP 101886] gi|262222507|gb|EEY73818.1| flagellar hook protein FlgE [Grimontia hollisae CIP 101886] Length = 401 Score = 92.2 bits (227), Expect = 6e-17, Method: Composition-based stats. Identities = 37/132 (28%), Positives = 65/132 (49%), Gaps = 2/132 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 S NIGL+ A +++T++ N+SN TVG+++ + +F +V + V++ + Sbjct: 2 SINIGLSGLRATSDQINTISHNISNVGTVGYKSSRTEFQDVYAPQFGGGEFGGVEVSNVR 61 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPV 123 + S G+ STG D A+ G+ +F ++ + TR+G F + DG LV+A G Sbjct: 62 Q--SFTSGAATSTGRNSDLAINGEGFFMVQQNGQRMYTRNGIFNLDSDGYLVTADGLRLQ 119 Query: 124 LDMASVPIQIPQ 135 S I Sbjct: 120 GYGVSETGSIQN 131 Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats. Identities = 20/149 (13%), Positives = 47/149 (31%), Gaps = 10/149 (6%) Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-----EISQKGKVIAT 157 K+ D S + G ++ + P K + G + K ++ Sbjct: 253 SATMKIEMDVSEFTQFGSDFSINESKQDGYAPGKLAGWYFDADGSVYARYSNGKTQLQGQ 312 Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFL-----EDSNANSMYEMGQ 212 + L +G + + + + T + G L E SN + EM Sbjct: 313 LVLARFPNQEGLQQAGGTRWTESFSSGTALFGQPGTGQFGALRVGAYESSNVDLTEEMVS 372 Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIRNI 241 ++ + + I +++ + +N+ Sbjct: 373 LMSAQSNYQANAKTIQASQEMVQILFQNM 401 >gi|315637837|ref|ZP_07893027.1| flagellar hook protein [Campylobacter upsaliensis JV21] gi|315482078|gb|EFU72692.1| flagellar hook protein [Campylobacter upsaliensis JV21] Length = 545 Score = 92.2 bits (227), Expect = 6e-17, Method: Composition-based stats. Identities = 38/202 (18%), Positives = 71/202 (35%), Gaps = 11/202 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI----KNDIDQKI 56 M +F G++ + A+N++N +T GF+ +F ++ + + Q Sbjct: 1 MMGAFYNGISGVKTNSFGIDISANNIANVNTTGFKYSNAEFKDIFYSTITSQSTNPAQGG 60 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLV 115 S L E GS +++ E D AL+G +F + + TR+G FK +G LV Sbjct: 61 YGSTSASSKLVFEQGSPVASEGEFDVALQGKGFFGVLGADGMPYYTRNGAFKRDANGHLV 120 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 + G + + M I D + + T ++ + Sbjct: 121 DSYGNFVLGTMNPAFQGITYSDRVAGLMG------DYLNTGTPVNNGFTVNSNDKFTLGT 174 Query: 176 GISPNIPPTPLEDLSGVTVKRG 197 S P+ V + Sbjct: 175 TGSQGALQVPINMYLPPKVTQN 196 Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 41/96 (42%), Gaps = 7/96 (7%) Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPP-------TPLEDLSGVTVKRGFLEDSN 203 + ++ + LY+ QG + ++ + E ++ K GFLE SN Sbjct: 447 QTAIVGKIALYNFINEQGLMAMGDNIFAATGNSGEASFIMKDGEIVNTAKFKGGFLEQSN 506 Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + E+ +I + F++ + I +++ + +AI Sbjct: 507 VDLSMELSNLIVTQRAFDASSKSITTSDQMIQKAIN 542 >gi|315930325|gb|EFV09413.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni 305] Length = 864 Score = 92.2 bits (227), Expect = 6e-17, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 58/182 (31%), Gaps = 14/182 (7%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------K 49 S G++ A + + +N+SN +T GF+ + F + Sbjct: 1 MRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATAPTDGRGG 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRFK 107 ++ Q V+ GS +T D A+ GD +F + LTR G FK Sbjct: 61 SNPLQIGLGVSVSSTTRIHSQGSVQTTDKNTDVAINGDGFFMVSDDGGLTNYLTRSGDFK 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 + G+ V+ +G + Q +T +++ Sbjct: 121 LDAYGNFVNNAGFVVQGWNINWDDQTIDSSRTPQNIFIDPGMHIPAAKSTEVAIKANLNS 180 Query: 168 GF 169 G Sbjct: 181 GL 182 Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 17/144 (11%), Positives = 46/144 (31%), Gaps = 5/144 (3%) Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 T + S + +G+ + + + + K +A + + Sbjct: 718 TSGSNDGLVSSNSASTLTGQATDGYTSGNLKPDAIRVDDKGNILGEFTNGKTFAVAKIAM 777 Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIH 215 SV + G + + T +K LE SN + + ++I Sbjct: 778 ASVANNSGLEEIGGNLFKVTANSGNIVVGEAGTGGRGEMKTSALEMSNVDLSRSLTELII 837 Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239 + + + + + I +++ + I+ Sbjct: 838 IQRGYQANSKTISTSDQMLQTLIQ 861 >gi|104782843|ref|YP_609341.1| flagellar hook protein FlgE [Pseudomonas entomophila L48] gi|95111830|emb|CAK16554.1| flagellar hook protein FlgE [Pseudomonas entomophila L48] Length = 463 Score = 91.9 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 36/192 (18%), Positives = 72/192 (37%), Gaps = 3/192 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---DIDQKISFVA 60 SFNIGL+ A ++L +N++N +T GF++ + +F++V +Q + V Sbjct: 2 SFNIGLSGLYAANKQLDVTGNNIANVNTNGFKSSRAEFADVYAGANRLGVGKNQVGNGVR 61 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 G +TG LD ++G +F L + +R G F+ D +V++ G Sbjct: 62 LANVSQQFGQGDVNNTGNVLDMGIQGQGFFVLSDNGSLSYSRAGAFQTNKDNFVVTSDGL 121 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 A +I + + ++ K + G+ + + + Sbjct: 122 RLQGYAADANGKIQKGVLTDLKIDTSALAPKSTTLIDQGINLNSSALDIPLQVWDATATP 181 Query: 181 IPPTPLEDLSGV 192 P + Sbjct: 182 PAMVPNKPFDPT 193 Score = 69.1 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 19/123 (15%), Positives = 39/123 (31%), Gaps = 5/123 (4%) Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 D + I + V +Q+ + I + + S QG + + + Sbjct: 339 QSQDGYATGILSNLSIDSTGVMFASFSNQQSRAIGQVAIASFANPQGLQQIGGTRWKESF 398 Query: 182 PP-----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + + +V+ LE SN N E+ ++I + + I M Sbjct: 399 ASGIPGIDAPKTGTLGSVESNSLEASNVNLTQELVELIKAQSNYQANAKTISTESTIMQT 458 Query: 237 AIR 239 I+ Sbjct: 459 IIQ 461 >gi|167623361|ref|YP_001673655.1| flagellar hook protein FlgE [Shewanella halifaxensis HAW-EB4] gi|167353383|gb|ABZ75996.1| flagellar basal body FlaE domain protein [Shewanella halifaxensis HAW-EB4] Length = 453 Score = 91.9 bits (226), Expect = 7e-17, Method: Composition-based stats. Identities = 38/184 (20%), Positives = 72/184 (39%), Gaps = 5/184 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61 SFNI L+ + ++ L+T A+N++N +T GF+ + +F++V + N VA+ Sbjct: 2 SFNIALSGISSAQKDLNTTANNIANVNTTGFKESRAEFADVYASSIFANSKTTVGGGVAT 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESP---RGIILTRDGRFKVTDDGSLVSAS 118 + GS T LD A+ G +F S + TR G FK + +V ++ Sbjct: 62 SQVAQQFHQGSMAFTNNSLDMAINGGGFFVTSSEVGSQDHSYTRAGAFKFDSNNYIVDSA 121 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178 G + + + V ++++ G + + Sbjct: 122 GNFLQTFPVDKDGNSTSVSLTTTKPVQIPDTAGSPVKTDSVGIQMNLNAGESTLDPAAFD 181 Query: 179 PNIP 182 P+ P Sbjct: 182 PDDP 185 Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats. Identities = 15/91 (16%), Positives = 35/91 (38%), Gaps = 5/91 (5%) Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMY 208 +A + L S QG + N+ ++ P + +++ LE SN + Sbjct: 361 PLARVALVSFANEQGLSQAGNTSWKASLDSGPALAGEANSGTFGSIRSSALEQSNVDLTT 420 Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E+ +I + F + + ++ N ++ Sbjct: 421 ELVDLISAQRNFQANSRTLEVNNTLQQTILQ 451 >gi|254457547|ref|ZP_05070975.1| flagellar hook protein FlgE [Campylobacterales bacterium GD 1] gi|207086339|gb|EDZ63623.1| flagellar hook protein FlgE [Campylobacterales bacterium GD 1] Length = 705 Score = 91.9 bits (226), Expect = 7e-17, Method: Composition-based stats. Identities = 26/143 (18%), Positives = 52/143 (36%), Gaps = 14/143 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G++ + + + ++N++N +T GF+ + FS+++ Sbjct: 1 MLKSLFSGVSGLQSHQVAMDVESNNIANVNTTGFKYSRANFSDLLAQTKAIATAPQGALG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGRF 106 + Q GS ++ D A++GD ++ + G TR G F Sbjct: 61 GKNPVQVGLGSTISSMTRIFSQGSVQNSDKNTDVAIQGDGFYIVSPDGGNTYKYTRAGDF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASV 129 K G+ V +G + Sbjct: 121 KFDAGGNFVDNNGFVTQGWLRDP 143 Score = 67.6 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 14/120 (11%), Positives = 39/120 (32%), Gaps = 5/120 (4%) Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183 D + + + + + + +A +G+ ++G + Sbjct: 582 QDGYTGGDLVGIRIDQSGTLVGSFSNGRSFGLAQIGMAKFTNNEGLSVEGGNIFIQTANS 641 Query: 184 TPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 + T ++ LE SN + + Q+I + + F + I +++ + I Sbjct: 642 GDPIIGTAATAGRGFIQAAALEASNVDLSRALTQLIIIQRGFQANGKTITTSDQLLQTLI 701 >gi|327193059|gb|EGE59971.1| flagellar hook protein [Rhizobium etli CNPAF512] Length = 434 Score = 91.9 bits (226), Expect = 7e-17, Method: Composition-based stats. Identities = 43/183 (23%), Positives = 74/183 (40%), Gaps = 10/183 (5%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 S ++ A RLSTV+DN++N +T G++ + FS +V + V + Sbjct: 6 SMKTAVSGMNAQANRLSTVSDNIANVNTTGYKAVSTSFSSLVLPSSGG-NYNSGGVQTSV 64 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGKYP 122 + G T + D A+ GD +F ++ P G +LTR G F+ D+G+LV+A+G Sbjct: 65 RQAVSDQGDISYTTSTTDLAISGDGFFIVQGPDGTPVLTRAGDFQKDDEGNLVNAAGFQL 124 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + V G + GL ++ + G + + P Sbjct: 125 MGYSY--------DSGSPAVVVNGFDGLVPVNVNQDGLTAIASTSGVFKGNLDSNANVAP 176 Query: 183 PTP 185 P Sbjct: 177 VAP 179 Score = 73.4 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 17/121 (14%), Positives = 35/121 (28%), Gaps = 1/121 (0%) Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178 + V I + + + + + G V N Sbjct: 312 NGQAATPVKDVTIDGDGIVYAKYEDGSTKPLYRIPLANVASPDKLTLMSGNVYSANGQSG 371 Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 + P + T+K G LE SN + E+ +MI + + + + + M + Sbjct: 372 VTVTGFPQTNG-LGTIKSGALEGSNVDLAGELTEMIEAQRSYTANSKVFQTGSDIMDVLV 430 Query: 239 R 239 Sbjct: 431 N 431 >gi|228984838|ref|ZP_04145009.1| Flagellar hook protein FlgE [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229155324|ref|ZP_04283435.1| Flagellar hook protein FlgE [Bacillus cereus ATCC 4342] gi|228628249|gb|EEK84965.1| Flagellar hook protein FlgE [Bacillus cereus ATCC 4342] gi|228774890|gb|EEM23285.1| Flagellar hook protein FlgE [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 437 Score = 91.9 bits (226), Expect = 7e-17, Method: Composition-based stats. Identities = 36/222 (16%), Positives = 72/222 (32%), Gaps = 20/222 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49 M + + A + LS ++N++N TVG++ K F +++ Sbjct: 1 MIKALYTSITGMNAAQNALSVTSNNIANAQTVGYKKQKAIFDDLLYNNTVGSRGDGAYAG 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF--ALESPRGIILTRDGRFK 107 + + V GS T +++ A+EG+ F + + TR G F Sbjct: 61 TNPKSIGNGVKFSGTSTDFSDGSITLTSDKMETAIEGNGLFLVGDRNGGNVEYTRKGSFG 120 Query: 108 VTDDGSLVSASGKYPVL-------DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 V+ D + + G+Y + + G + K + + Sbjct: 121 VSKDSYVTNTGGQYVLGYGVKTGTQEIDFSSRPSPIHIPMGSAVGGIQTDKATIGGNLPR 180 Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDS 202 +S F + G S + + + TV +E Sbjct: 181 NQNALSHEFTVFDAEGNSLTLRVNIKQKTTKETVDGKVVEKP 222 Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 18/144 (12%), Positives = 40/144 (27%), Gaps = 9/144 (6%) Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 G +S + + I + G + KV+ + + + Sbjct: 298 SGLTNYPTGKTLSTTEVTGRPAAIANDYSISDGGFVMMKYSDGSM----KVVGQLAIATF 353 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 S G ++ N V+ E SN + E ++ + Sbjct: 354 PNSGGLMKTGNGNYVATPSAGIPGIGVAGENGAGNVRGSAKESSNVDLSVEFVDLMLYQR 413 Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242 F +I +++ + E + I Sbjct: 414 GFQGNAKVIKVSDEVLNEVVNLIR 437 >gi|118477189|ref|YP_894340.1| flagellar hook protein FlgE [Bacillus thuringiensis str. Al Hakam] gi|225863612|ref|YP_002748990.1| putative flagellar hook protein FlgE [Bacillus cereus 03BB102] gi|229183945|ref|ZP_04311161.1| Flagellar hook protein FlgE [Bacillus cereus BGSC 6E1] gi|118416414|gb|ABK84833.1| flagellar hook protein [Bacillus thuringiensis str. Al Hakam] gi|225790448|gb|ACO30665.1| putative flagellar hook protein FlgE [Bacillus cereus 03BB102] gi|228599597|gb|EEK57201.1| Flagellar hook protein FlgE [Bacillus cereus BGSC 6E1] Length = 437 Score = 91.9 bits (226), Expect = 7e-17, Method: Composition-based stats. Identities = 36/222 (16%), Positives = 72/222 (32%), Gaps = 20/222 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49 M + + A + LS ++N++N TVG++ K F +++ Sbjct: 1 MIKALYTSITGMNAAQNALSVTSNNIANAQTVGYKKQKAIFDDLLYNNTVGSRGDGAYAG 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF--ALESPRGIILTRDGRFK 107 + + V GS T +++ A+EG+ F + + TR G F Sbjct: 61 TNPKSIGNGVKFSGTSTDFSDGSITLTSDKMETAIEGNGLFLVGDRNGGNVEYTRKGSFG 120 Query: 108 VTDDGSLVSASGKYPVL-------DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 V+ D + + G+Y + + G + K + + Sbjct: 121 VSKDSYVTNTGGQYVLGYGVKTGTQEIDFSSRPSPIHIPMGSAVGGIQTDKATIGGNLPR 180 Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDS 202 +S F + G S + + + TV +E Sbjct: 181 NQNALSHEFTVFDAEGNSLTLRVNIKQKTTKETVDGKVVEKP 222 Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 18/144 (12%), Positives = 40/144 (27%), Gaps = 9/144 (6%) Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 G +S + + I + G + KV+ + + + Sbjct: 298 SGLTNYPTGKTLSTTEVTGRPAAIANDYSISDGGFVMMKYSDGSM----KVVGQLAVATF 353 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 S G ++ N V+ E SN + E ++ + Sbjct: 354 PNSGGLMKTGNGNYVATPSAGIPGIGVAGENGAGNVRGSAKESSNVDLSVEFVDLMLYQR 413 Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242 F +I +++ + E + I Sbjct: 414 GFQGNAKVIKVSDEVLNEVVNLIR 437 >gi|27464953|gb|AAN63050.1| flagellar component FlgF [Vibrio vulnificus] Length = 193 Score = 91.9 bits (226), Expect = 7e-17, Method: Composition-based stats. Identities = 47/195 (24%), Positives = 74/195 (37%), Gaps = 11/195 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + ++ Q L A+N++N T GFR + + + F Sbjct: 1 MDRALFLAMSGAKQNMQALQLRANNLANVSTTGFRADLAQARSM--QAYGEGLPTRVFSM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESP-RGIILTRDGRFKVTDDGSLVSASG 119 + + + GS I+TG +LD +EG+ W + LTR+G KV +G L +ASG Sbjct: 59 TERPGHNFAQGSVITTGRDLDITIEGNGWIGVMDKLGKEGLTRNGNLKVDQNGLLSNASG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD-------MSQGFVRR 172 + VL PI IP +G G IS + + +D + Sbjct: 119 -HLVLGEGGAPITIPLPVSKIEIGRDGTISVLPQGAPAEEMEEIDRIKLVKTNDSALFKD 177 Query: 173 ENSGISPNIPPTPLE 187 N P P E Sbjct: 178 TNGLFRHKEPNQPYE 192 >gi|77918787|ref|YP_356602.1| flagellar biosynthesis, hook protein [Pelobacter carbinolicus DSM 2380] gi|77544870|gb|ABA88432.1| flagellar biosynthesis, hook protein [Pelobacter carbinolicus DSM 2380] Length = 413 Score = 91.9 bits (226), Expect = 8e-17, Method: Composition-based stats. Identities = 29/130 (22%), Positives = 55/130 (42%), Gaps = 5/130 (3%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID---QKISFV 59 ++ G++ +S + +N++NT+TVGF++ + FS+++ + N Q Sbjct: 5 SALYSGISGMNTNGTAMSVIGNNIANTNTVGFKSSRTVFSDLLASSVNGSGGASQVGRGT 64 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI--ILTRDGRFKVTDDGSLVSA 117 G+F +T ++ D A+EG+ F + TR G F +G L +A Sbjct: 65 GLSTVDNLFSQGTFETTESQTDLAIEGEGLFVVREEGAESLYYTRAGSFSFDGEGFLTNA 124 Query: 118 SGKYPVLDMA 127 G Sbjct: 125 EGYRVQGKTY 134 Score = 72.6 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 22/134 (16%), Positives = 41/134 (30%), Gaps = 8/134 (5%) Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169 + S V + + I I + + GE K +++ G Sbjct: 281 ANDSQVISQTQNGYGAGNLTNISIDNEGNVLAKYSNGEEIAKSRIVLAK----FSSFSGL 336 Query: 170 VRRENSGISPNIPPTPLEDLSGVT----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225 + S S P T + LE S + E +MI + F + + Sbjct: 337 RKEGASLFSATGESGPPRIGVPGTELGNIFTNALEQSTVDLAAEFVKMITTQRGFQANSK 396 Query: 226 LIDENEKSMLEAIR 239 +I ++ + E I Sbjct: 397 VITTTDEMLSELIN 410 >gi|91791429|ref|YP_561080.1| protein of unknown function DUF1078-like protein [Shewanella denitrificans OS217] gi|91713431|gb|ABE53357.1| protein of unknown function DUF1078-like protein [Shewanella denitrificans OS217] Length = 392 Score = 91.9 bits (226), Expect = 8e-17, Method: Composition-based stats. Identities = 31/125 (24%), Positives = 53/125 (42%), Gaps = 4/125 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M +F GL+ + + L V++N++N +T G+R + A+ D D+ Sbjct: 1 MLQAFYTGLSGLNSYSKNLDNVSNNIANMNTAGYRGMD----SFYQALGGDSDKPGLGAQ 56 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 VG TG + D A+ G +FAL + TR G+F+ + LV + Sbjct: 57 ISGLGYRFSVGDIRQTGNDFDLAITGTGFFALLDGEKVFYTRTGQFEFDQNNVLVDKNTG 116 Query: 121 YPVLD 125 + V Sbjct: 117 FKVAG 121 Score = 56.8 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 6/53 (11%), Positives = 22/53 (41%) Query: 188 DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 + + +E SN + E M+ + + + + + +++ + + + N Sbjct: 336 EGRFKQLATSSIEMSNVDLSQEFADMLVIQRGYQASSRILNVANQMIEQLYEN 388 >gi|330830303|ref|YP_004393255.1| flagellar hook protein FlgE [Aeromonas veronii B565] gi|328805439|gb|AEB50638.1| Flagellar hook protein FlgE [Aeromonas veronii B565] Length = 450 Score = 91.9 bits (226), Expect = 8e-17, Method: Composition-based stats. Identities = 35/169 (20%), Positives = 67/169 (39%), Gaps = 5/169 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK--NDIDQKISFVAS 61 SFN L+ A ++ L+ A+N++N +T+GF+ + +F++V N Q + VA+ Sbjct: 2 SFNNALSGVNAAQKDLNVTANNIANVNTMGFKESRAEFADVYANSIFVNAKTQVGNGVAT 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI---ILTRDGRFKVTDDGSLVSAS 118 G G+ T LD A++G+ +F TR G FK+ ++ +V+ Sbjct: 62 GAVAQQFHQGALQFTNNALDLAIQGNGFFVTSDGLTNLDRTYTRAGAFKLNENSYMVNNQ 121 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 G Y + + + + S ++ Sbjct: 122 GHYLQGYEINTDGTPKAVSINATKPIQIPDRAGEPIKTSKIEASFNLPS 170 Score = 68.4 bits (165), Expect = 9e-10, Method: Composition-based stats. Identities = 17/123 (13%), Positives = 41/123 (33%), Gaps = 5/123 (4%) Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN- 180 D ++V + + + +A + + SQG + ++ + Sbjct: 326 LTQDGSTVGRLTKVEITPDGIVSATYSNATTIKVAMVAMAKFANSQGLTQVGDTSWRQSL 385 Query: 181 ----IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 P + T+K LE SN + E+ +I + F + + ++ N Sbjct: 386 LSGDALPGTPNSGTFGTIKSSALEQSNVDLTSELVDLITAQRNFQANSRSLEVNSSLQQT 445 Query: 237 AIR 239 ++ Sbjct: 446 ILQ 448 >gi|254516989|ref|ZP_05129047.1| flagellar hook protein FlgE [gamma proteobacterium NOR5-3] gi|219674494|gb|EED30862.1| flagellar hook protein FlgE [gamma proteobacterium NOR5-3] Length = 429 Score = 91.9 bits (226), Expect = 8e-17, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 54/135 (40%), Gaps = 2/135 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61 +F+ ++ A L +++N++N+ T GF+ + +F++V + V+ Sbjct: 2 AFSTAISGINAATADLGVISNNIANSSTTGFKASRAEFADVYATSLLGAGSNAIGKGVSL 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 G+ T LD A+ G+ +F L I TR G F+V +G LVS Sbjct: 62 AGVTQEFGQGNITFTNNSLDLAINGNGFFQLSVEGAIEYTRAGNFQVDREGFLVSNQNSR 121 Query: 122 PVLDMASVPIQIPQK 136 + + Sbjct: 122 LQGFQVDAGGDVTGQ 136 Score = 71.8 bits (174), Expect = 8e-11, Method: Composition-based stats. Identities = 15/98 (15%), Positives = 30/98 (30%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLED 201 + + + + + L S + G ++ T V+ LED Sbjct: 330 YTNGESRALGQIALASFNNQNGLQPVGDTNWVETFSSGSPNVGEPGTSGLGVVQSAALED 389 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN E+ +I + F + +I + I Sbjct: 390 SNVEITQELVDLIVAQRNFQANAQVIQAEDAITQTVIN 427 >gi|332799182|ref|YP_004460681.1| flagellar hook-basal body protein [Tepidanaerobacter sp. Re1] gi|332696917|gb|AEE91374.1| flagellar hook-basal body protein [Tepidanaerobacter sp. Re1] Length = 411 Score = 91.9 bits (226), Expect = 8e-17, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 64/189 (33%), Gaps = 12/189 (6%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 S G+ + ++ + +N++N +TVGF+ +V F + + Sbjct: 1 MRSMFSGVTGLRNHQVKMDVIGNNIANVNTVGFKKSRVTFQDTLSQTMRGAASPQGNRGG 60 Query: 54 ----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109 Q + S TG D ++EGD +F + + TR G F Sbjct: 61 TNPMQVGLGMTIASIDTIHSPSSAEYTGNMTDLSIEGDGYFIVGDGLDMFYTRAGNFGFD 120 Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169 ++G+L++ + V+ D+ EI + + A+ Sbjct: 121 ENGNLINTANGLKVMGWQDTEKHEVPADKSPQSIRSIEIRKGMMIPASATTEINFAKNLN 180 Query: 170 VRRENSGIS 178 EN+G Sbjct: 181 AETENNGTY 189 Score = 82.6 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 18/122 (14%), Positives = 42/122 (34%), Gaps = 5/122 (4%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + + V + + +A + L + D G ++ + + Sbjct: 287 YQNGYPAGTLTDVTTDTTGVITGIFDNGYNRQLAQVALANFDNPAGLIKAGQNMYRYSNN 346 Query: 183 PTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + T + G+LE SN + E QMI + F + + +I +++ + E Sbjct: 347 SGEPQIGESGTGGRGAIAPGYLEMSNVDLSEEFTQMIITQRGFQANSRIITTSDEMLQEL 406 Query: 238 IR 239 + Sbjct: 407 VN 408 >gi|221069322|ref|ZP_03545427.1| flagellar basal body FlaE domain protein [Comamonas testosteroni KF-1] gi|220714345|gb|EED69713.1| flagellar basal body FlaE domain protein [Comamonas testosteroni KF-1] Length = 422 Score = 91.5 bits (225), Expect = 8e-17, Method: Composition-based stats. Identities = 37/193 (19%), Positives = 65/193 (33%), Gaps = 7/193 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN--DIDQKISFVAS 61 F GL+ A + L + N++N+ T GF+ + F+E++ + V Sbjct: 2 GFQQGLSGLNAASKNLDVIGHNIANSSTTGFKASRADFAEMIASAIGSASGQSSGIGVNV 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASGK 120 GS STG LD A+ G+ +F ++ I TR G F + +G+L + Sbjct: 62 AAVSQQFRQGSITSTGNNLDLAINGNGFFVVKQSDGSIAYTRAGNFGLDKEGNLKTVDND 121 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 + + Q G+ I +V++ R Sbjct: 122 NVMGYVVDPTTGKIQSGATPVPMSF----PTGQPIPAKQTSTVNVELNLDARATDAAGDA 177 Query: 181 IPPTPLEDLSGVT 193 P+ T Sbjct: 178 TATPPVAATPRAT 190 Score = 79.5 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 32/187 (17%), Positives = 61/187 (32%), Gaps = 9/187 (4%) Query: 58 FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSA 117 F ASGK +GT LD ++ G P + G VS+ Sbjct: 238 FDASGKLTSVTPNAPTTGSGTTLDLSISGGTANPNGLPAFDVAFDFGGLTQFGTKFAVSS 297 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177 + A I + + I G +G++ L + +QG N+ Sbjct: 298 LKQDGYTSGALTGINVGRDGSIVASYSNGVTRTEGQI----ALAAFTNTQGLGSIGNNKW 353 Query: 178 SPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 P + + +++ G LE+SN + E+ M+ + + + I ++ Sbjct: 354 VATSDSGPALNGSAQTGTFGSLQSGALEESNVDLTAELVNMMTAQRSYQANAQTIKTQDQ 413 Query: 233 SMLEAIR 239 + Sbjct: 414 VFSTLVN 420 >gi|310659037|ref|YP_003936758.1| flagellar hook protein [Clostridium sticklandii DSM 519] gi|308825815|emb|CBH21853.1| flagellar hook protein [Clostridium sticklandii] Length = 418 Score = 91.5 bits (225), Expect = 9e-17, Method: Composition-based stats. Identities = 29/151 (19%), Positives = 60/151 (39%), Gaps = 15/151 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-------- 52 M S N ++A + R+ + +N++N +T+G+++ +V F + + + Sbjct: 1 MMRSMNSAVSALRNHQLRMDVIGNNIANVNTIGYKSSRVTFKDSLSQMLRGASGPDASRG 60 Query: 53 ----DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE---SPRGIILTRDGR 105 Q + G T LD + G+ +F + + G+ TR G Sbjct: 61 GTNPQQVGLGMDLSSIDTLFTTGVPDRTDRGLDVMVNGEGFFMVSADGTDNGMYYTRAGN 120 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQK 136 F + +DG+LV+A G + + + Sbjct: 121 FDIDEDGNLVNADGLRVLGYKTDDAGNVGNE 151 Score = 84.1 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 14/94 (14%), Positives = 33/94 (35%), Gaps = 5/94 (5%) Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNAN 205 + K++ + G V+ + + + ++ G LE SN + Sbjct: 322 RTKILGQVATSIFANPAGLVKMGGNLYRSSANSGDPQVNKPGTGGNGGLQPGALEMSNVD 381 Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E MI + F + + +I ++ + E + Sbjct: 382 LGKEFTNMIVTQRGFQANSRIISTTDQMLEELVN 415 >gi|91204389|emb|CAJ70889.1| similar to flagellar hook protein [Candidatus Kuenenia stuttgartiensis] Length = 532 Score = 91.5 bits (225), Expect = 9e-17, Method: Composition-based stats. Identities = 34/135 (25%), Positives = 60/135 (44%), Gaps = 4/135 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID----QKISFV 59 + G+ + + L + +N+SN +T G+++ ++ FS+++ K Q V Sbjct: 6 ALYAGVTGIRSHQSWLDVIGNNLSNINTYGYKSSRLLFSDLISQDKGSGGVNPMQIGMGV 65 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119 G G+ +T E DFA++GD +F L +R G F LV ++ Sbjct: 66 KVGSISSLFSQGTLEATNNEFDFAIQGDGFFVLNGGNKNFFSRVGTFATDASNQLVDSTT 125 Query: 120 KYPVLDMASVPIQIP 134 Y +LD + I IP Sbjct: 126 GYQILDSSGKTITIP 140 Score = 78.8 bits (192), Expect = 6e-13, Method: Composition-based stats. Identities = 34/200 (17%), Positives = 67/200 (33%), Gaps = 9/200 (4%) Query: 45 VGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDG 104 + A D I+ + + S T L F +G + + Sbjct: 334 MRASMPSADGTITTDTISAITFNDDGSLKSSGDTTLTFKFDGITTSQTVKFKLGTFGKTD 393 Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 + GS V+AS + + + ++ + G S+ IA + L + Sbjct: 394 GIYQSGKGSSVTASEQDGSESGSFSSFSVDTDGTMYALYSNGTSSK----IAQLQLATFG 449 Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQK 219 QG R ++ +G T + G+LE SN + E+ +I + Sbjct: 450 NVQGLRRSGDNLYEQTDSSGEPLYTTGGTGSAGDIYNGYLEASNVDMTSELTSLIMAQRG 509 Query: 220 FNSITTLIDENEKSMLEAIR 239 F + +I ++ + EA+ Sbjct: 510 FQLNSRVISTADEVLAEAVN 529 >gi|283955452|ref|ZP_06372950.1| flagellar hook protein flgE [Campylobacter jejuni subsp. jejuni 414] gi|283793079|gb|EFC31850.1| flagellar hook protein flgE [Campylobacter jejuni subsp. jejuni 414] Length = 544 Score = 91.5 bits (225), Expect = 9e-17, Method: Composition-based stats. Identities = 44/216 (20%), Positives = 80/216 (37%), Gaps = 9/216 (4%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI----KNDIDQKIS 57 SF G++ + A+N++N +T GF+ +F ++ + + Q Sbjct: 1 MNSFYNGVSGVKTNSFGIDIYANNIANVNTTGFKYSDAQFKDIFYSTVTTQSTNPAQGGY 60 Query: 58 FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLVS 116 S + E GSF+++ +E D AL+G +F + TR+G FK +G LV Sbjct: 61 GSGSASSNVVFEQGSFVASDSEFDVALQGKGFFGVLGADNNAYYTRNGTFKRDANGYLVD 120 Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + G + + M I D + + + + S G + + Sbjct: 121 SYGNFVLGTMNPAFTGINYSDRVAGLMGDYLNTGTPVNNGFTVNSNDSFSIGTTASQQAI 180 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQ 212 P P + V G L N N+ E+ + Sbjct: 181 KVPVNMYLPPQVTQNVK-WSGSL---NTNTTTEVVK 212 Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 7/124 (5%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 D + + K ++ + LY+ QG ++ + Sbjct: 418 QQDGVAEGFFKQYNISDDGSIIAQFSNGKNAIVGKLALYNFINEQGLAAMGDNIFAATAN 477 Query: 183 P-------TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 + ++ K GFLE SN + E+ +I + F++ + I +++ + Sbjct: 478 SGNASFIMKNGQIVNTAKFKGGFLEQSNVDLSVELSNLIVTQKAFDASSKSITTSDQMIQ 537 Query: 236 EAIR 239 +AI Sbjct: 538 KAIN 541 >gi|148554189|ref|YP_001261771.1| flagellar basal body FlaE domain-containing protein [Sphingomonas wittichii RW1] gi|148499379|gb|ABQ67633.1| flagellar basal body FlaE domain protein [Sphingomonas wittichii RW1] Length = 435 Score = 91.5 bits (225), Expect = 9e-17, Method: Composition-based stats. Identities = 34/197 (17%), Positives = 61/197 (30%), Gaps = 4/197 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK-ISFVASG 62 SF L+ A + L+ +++N++N T GF+ +F ++V + Sbjct: 2 SFYTALSGLKASQTDLAVISNNIANVGTTGFKRSGTEFGDLVSSSPMQSSGIAGQGTRLR 61 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFAL---ESPRGIILTRDGRFKVTDDGSLVSASG 119 G S+ LD A+ G +F S + TR+G F V + LV +SG Sbjct: 62 GIAQQFTQGGLESSERSLDLAISGQGFFVTRASNSNGQVSYTRNGAFSVDANRFLVDSSG 121 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 Y + + ++ SV I Sbjct: 122 AYLQALPTDTKGNVTATGLSSARSIQLPLTSGTSKATQTIDLSVTFPSAGDVPSTRAIYS 181 Query: 180 NIPPTPLEDLSGVTVKR 196 P + + + Sbjct: 182 TTNPYKFDRTDPNSYNQ 198 Score = 75.3 bits (183), Expect = 7e-12, Method: Composition-based stats. Identities = 19/150 (12%), Positives = 44/150 (29%), Gaps = 9/150 (6%) Query: 95 PRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV 154 P L G K++ +++ + + + I G+ GK+ Sbjct: 287 PLEFTLNYSGSTKMSASPFTLTSFDQDGYAAGQLDNVSVGADGLIVATFSNGDSQALGKI 346 Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS-----GVTVKRGFLEDSNANSMYE 209 I + +G + +S ++ G LE +N + E Sbjct: 347 ILA----NFSNPEGLRQLGDSKWGATGLSGEPIIGEASSNGTGQIQSGALEQANVDITEE 402 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + +I + F++ I+ + Sbjct: 403 LVALIQAQRNFSANAKTIEAANTMTQTIVN 432 >gi|311694361|gb|ADP97234.1| flagellar hook protein FlgE [marine bacterium HP15] Length = 632 Score = 91.5 bits (225), Expect = 9e-17, Method: Composition-based stats. Identities = 38/184 (20%), Positives = 69/184 (37%), Gaps = 10/184 (5%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA--IKNDIDQKISFVAS 61 +FN GL+ A L +N++N TVGF+ K +F ++ + + + V Sbjct: 2 AFNTGLSGLRAASVDLDVTGNNIANASTVGFKGSKAQFGDLYASGFLSAGTNPIGDGVRV 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 S G+ T LD A+ GD +F L + I +R G+F + +G + + Sbjct: 62 QDVKQSFGQGNISFTDNGLDMAIAGDGFFILNNGGEIRYSRAGQFGIDKEGYVTNNQNMR 121 Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 A + G +G++ +A ++D RE+ + Sbjct: 122 VQGYTADEDGNL--------SGIRGDLQIATDNLAPRRTTNLDSDLNLDSRESVLETRVR 173 Query: 182 PPTP 185 P Sbjct: 174 DVGP 177 Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 11/98 (11%), Positives = 35/98 (35%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLED 201 + + + + + L S + + G ++ + + ++K +E+ Sbjct: 533 YTNGQSQALGQVALASFNNTNGLSPVGDTSWVETFESGQPIIGAPDTGTLGSIKASSVEE 592 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ +I + + + I+ ++ I Sbjct: 593 SNVDLSAELVNLIIAQRNYQANAKTIETSDAVTQTIIN 630 >gi|154250212|ref|YP_001411037.1| hypothetical protein Fnod_1537 [Fervidobacterium nodosum Rt17-B1] gi|154154148|gb|ABS61380.1| protein of unknown function DUF1078 domain protein [Fervidobacterium nodosum Rt17-B1] Length = 770 Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 35/187 (18%), Positives = 71/187 (37%), Gaps = 13/187 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G++ +Q + V++N+SN +T+GF+ +V ++ I Sbjct: 1 MMRSLYSGVSGLQGFQQEIDVVSNNISNVNTIGFKGARVTYATNFSQILDMSRRATDNTG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 + Q + GSF +TG + D A++G+ +F L + + TR G F + Sbjct: 61 GTNPKQIGYGIRVASIDKIMNQGSFQNTGKKTDLAIQGEGFFILSNGQRQFFTRAGNFDL 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEIS-QKGKVIATMGLYSVDMSQ 167 +G++V + + + + + + I G +A + M+ Sbjct: 121 DLNGTIVQPTTGLKLQGWVAEVDPMSGRRYVDTNKPISNIQISSGLSMAAKQTTRMTMAG 180 Query: 168 GFVRREN 174 R Sbjct: 181 NLDARVG 187 Score = 83.0 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 32/92 (34%), Gaps = 5/92 (5%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLEDSNANSM 207 V+ + L + + G + NS + ++ G LE SN + Sbjct: 676 DVLGKVALATFNNPAGLLELGNSLYGESANSGTARIGQPSKGGFGSLVAGALEMSNVDLS 735 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E ++I + F + I ++ + E + Sbjct: 736 EEFTKLIIAQRGFQANARTITTADQILQEVVN 767 >gi|224370779|ref|YP_002604943.1| FlgE [Desulfobacterium autotrophicum HRM2] gi|223693496|gb|ACN16779.1| FlgE [Desulfobacterium autotrophicum HRM2] Length = 901 Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 32/129 (24%), Positives = 54/129 (41%), Gaps = 5/129 (3%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA---IKNDIDQKISFV 59 +S G + + + V +N+SN +TVGF+ + F++ + ++ DQ + Sbjct: 5 SSLFTGTSGLTNMGNAMQVVGNNISNVNTVGFKKGRSTFADTLSQSVATQSGTDQVGRGM 64 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI--ILTRDGRFKVTDDGSLVSA 117 + G S + GSF STG D ++ GD +F + TR G F G LV+ Sbjct: 65 SIGAVDQSFDTGSFESTGNSTDLSIGGDGFFVVRQSNSENNFYTRAGNFHFDKSGQLVNP 124 Query: 118 SGKYPVLDM 126 Sbjct: 125 ESYLVQGWA 133 Score = 82.6 bits (202), Expect = 5e-14, Method: Composition-based stats. Identities = 24/162 (14%), Positives = 46/162 (28%), Gaps = 7/162 (4%) Query: 85 EGDAWFALESPRGIIL--TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNV 142 G F++E G ++ S++ Y D S + Sbjct: 738 FGSTEFSIELDIGTRYDGINFINDSLSSTQYARSSNTVYQDADGYSAGDLQGVDVASDGI 797 Query: 143 GEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRG 197 + + + +GL + G + S + T+ Sbjct: 798 MTGVYSNGQLIPLFRVGLAKFLNNNGLSNSGGNLFSETRDSGSAITNKPGENGLGTISPN 857 Query: 198 FLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 LE SN + E +MI + F + + I ++ M I Sbjct: 858 SLEMSNVDISEEFVKMITTQRGFQANSKTITTVDEMMQTVIN 899 >gi|192358786|ref|YP_001982400.1| flagellar hook protein FlgE [Cellvibrio japonicus Ueda107] gi|190684951|gb|ACE82629.1| flagellar hook protein FlgE [Cellvibrio japonicus Ueda107] Length = 803 Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 38/207 (18%), Positives = 76/207 (36%), Gaps = 7/207 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61 SFN L+ A L +N++N T+GF++ + +F +V + + S V Sbjct: 2 SFNTALSGIRAANTDLQVTGNNIANASTIGFKSSRAEFGDVYTSTLLGGGANTPGSGVTI 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 G+ T ELD ++ G+ +F +E + TR G F + +G +V+ +G Sbjct: 62 QNIRQQFTQGNLKFTQNELDLSINGEGFFVVEKNGERLFTRAGTFGLDKNGYIVNGTGAL 121 Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 +A I + ++ + A ++++ ++ + S N Sbjct: 122 LQGFVADANGNISG--VLSDLRVDVSSQAPRQTTAVDASFNLNANESVLETTGQRFSSNG 179 Query: 182 PPTPLEDLSGVTVKRGFLEDSNANSMY 208 T L N ++ Sbjct: 180 SGVNEAQQGAKTATTSTL---NVGAVS 203 Score = 68.0 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 8/94 (8%), Positives = 31/94 (32%), Gaps = 5/94 (5%) Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNAN 205 + +++ + L + ++ + + + + G +E+SN + Sbjct: 708 EAQILGQVALANFASVDNLKPTGDTMWTQTFESGEAVIGAPGSAQLGNITAGAVEESNVD 767 Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 ++ +I + + + I+ + I Sbjct: 768 LSEQLVNLIIAQRNYQANAKTIETANATTQTIIN 801 >gi|88704306|ref|ZP_01102020.1| Flagellar hook protein FlgE [Congregibacter litoralis KT71] gi|88701357|gb|EAQ98462.1| Flagellar hook protein FlgE [Congregibacter litoralis KT71] Length = 429 Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 37/195 (18%), Positives = 64/195 (32%), Gaps = 5/195 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61 +F+ ++ A L V++N++N T GF+ + +F++V + V+ Sbjct: 2 AFSTAISGINAATADLGVVSNNIANASTTGFKASRAEFADVYATSLLGAGSNAIGKGVSL 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 G+ T LD A+ G+ +F L + TR G F+V +G LVS Sbjct: 62 AGVTQEFGQGNITFTNNSLDLAINGNGFFQLSVEGAVEYTRAGNFQVDREGFLVSNQNAR 121 Query: 122 PVL---DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178 D +I + + + + V GF Sbjct: 122 LQGFQVDGGGDVTGQLGDIQIDTSLIDPNPTSNVSLTSNLDSREVTTGTGFATNGPYDAF 181 Query: 179 PNIPPTPLEDLSGVT 193 P P T Sbjct: 182 AVPPTAPSPADFNAT 196 Score = 71.8 bits (174), Expect = 8e-11, Method: Composition-based stats. Identities = 15/98 (15%), Positives = 30/98 (30%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLED 201 + + + + + L S + G ++ T V+ LED Sbjct: 330 YTNGESRALGQIALASFNNQNGLQPVGDTNWVETFSSGSPNVGEPGTSGLGAVQSAALED 389 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN E+ +I + F + +I + I Sbjct: 390 SNVEITQELVDLIVAQRNFQANAQVIQAEDAITQTVIN 427 >gi|220905353|ref|YP_002480665.1| hypothetical protein Ddes_2091 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869652|gb|ACL49987.1| protein of unknown function DUF1078 domain protein [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 499 Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 61/181 (33%), Gaps = 14/181 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--------- 51 M +S IG L + ++ +N++N T+G++ + FS++ A + Sbjct: 1 MNSSLYIGATGMKGLAEGMNVTTNNLANVSTIGYKQQGILFSDIFYAEQGGMGNWWNAQD 60 Query: 52 -----IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106 + Q + G+ S+ T D A+ G +F + + TR G F Sbjct: 61 NSRVALGQVGMGLQVESVRTLFGQGALESSNTVTDMAISGKGFFQVTDGVDLYYTRAGDF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 + +G L + SG + +I S+ + ++ Sbjct: 121 RPDREGVLRTPSGLALNGYKYNADGSKGGLQQITIDKFATMPSKSTTSVDMRFNLGLETP 180 Query: 167 Q 167 Sbjct: 181 N 181 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 14/97 (14%), Positives = 37/97 (38%), Gaps = 5/97 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS-----GVTVKRGFLED 201 + + + + + G R ++ S ++ T++ +E+ Sbjct: 399 FSNNQSMDLWQIPVCRFTSEDGLRREGHNMFSATADAGQMDMGEAGTENYGTIRAYNIEN 458 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 SN + EM MI + F S + ++ ++ + +A+ Sbjct: 459 SNVDVATEMANMIITQRGFQSNSKVVTTADQMLQKAV 495 >gi|228945356|ref|ZP_04107711.1| Flagellar hook protein FlgE [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228814328|gb|EEM60594.1| Flagellar hook protein FlgE [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 437 Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 61/181 (33%), Gaps = 13/181 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49 M + + A + LS ++N++N TVG++ K F +++ Sbjct: 1 MIKALYTSITGMNAAQNALSVTSNNIANAQTVGYKKQKAIFDDLLYNNTVGSRGDGAYAG 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF--ALESPRGIILTRDGRFK 107 + + V GS T +++ A+EG+ F + + TR G F Sbjct: 61 TNPKSIGNGVKFSGTSTDFSDGSITLTSDKMETAIEGNGLFLVGDRNGGNVEYTRKGSFG 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 V+ D + + G+Y + Q + S G + ++ + Sbjct: 121 VSKDNYVTTTGGQYVLGYGVKNGTQEIDFSSRPSPIHIPMGSAVGGIQTDKATIGGNLPR 180 Query: 168 G 168 Sbjct: 181 N 181 Score = 68.7 bits (166), Expect = 6e-10, Method: Composition-based stats. Identities = 18/144 (12%), Positives = 40/144 (27%), Gaps = 9/144 (6%) Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 G +S + + I + G + KV+ + + + Sbjct: 298 SGLTNYPTGKTISTTEVTGRPAAIANDYSISDGGFVMMKYSDGSM----KVVGQLAVATF 353 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 S G ++ N V+ E SN + E ++ + Sbjct: 354 PNSGGLMKTGNGNYVATPSAGIPGIGVAGENGAGNVRGSAKESSNVDLSVEFVDLMLYQR 413 Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242 F +I +++ + E + I Sbjct: 414 GFQGNAKVIKVSDEVLNEVVNLIR 437 >gi|254462557|ref|ZP_05075973.1| flagellar hook protein FlgE [Rhodobacterales bacterium HTCC2083] gi|206679146|gb|EDZ43633.1| flagellar hook protein FlgE [Rhodobacteraceae bacterium HTCC2083] Length = 1399 Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 33/170 (19%), Positives = 70/170 (41%), Gaps = 5/170 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG--AIKNDIDQKISFVAS 61 SF L + +ST ++N++N T GF+ + +F ++ ++N S Sbjct: 2 SFYTALTGLNDAQSDISTSSNNIANVGTTGFKRSRAEFGDIFATSPLQNSSSSIGSGAIL 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWF---ALESPRGIILTRDGRFKVTDDGSLVSAS 118 G+ S+ LD A+ G +F ++ ++ TR+G F V ++ ++V +S Sbjct: 62 KGVKQQFTQGNIASSLNALDMAISGQGFFALKPSQTSTQVVYTRNGSFNVDNNRNVVDSS 121 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 G++ + + + KD + ++ T SV++ Sbjct: 122 GQFLLTYPVNEDGSVTAKDIDSATPLRLPVTSGDPQATTNVDLSVNLPAN 171 Score = 80.3 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 19/142 (13%), Positives = 41/142 (28%), Gaps = 9/142 (6%) Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162 V+ + + I + G+ GK++ L + Sbjct: 1259 FSSSTQLATPFAVNNLEQNGFTSGRLDGLNIDATGLLRANYTNGQNKPLGKIV----LAN 1314 Query: 163 VDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLT 217 + G + N+ T ++ G LE SN + E+ +I Sbjct: 1315 FNNQNGLKQVGNATFVETATSGEPLIGEAGTEGFGSIQSGALERSNVDITEELVNLITAQ 1374 Query: 218 QKFNSITTLIDENEKSMLEAIR 239 + F + + I+ + + I Sbjct: 1375 RNFQASSKAIETSTQLTQTIIN 1396 >gi|121607561|ref|YP_995368.1| flagellar basal body FlaE domain-containing protein [Verminephrobacter eiseniae EF01-2] gi|121552201|gb|ABM56350.1| flagellar basal body FlaE domain protein [Verminephrobacter eiseniae EF01-2] Length = 426 Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 40/193 (20%), Positives = 67/193 (34%), Gaps = 8/193 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID--QKISFVAS 61 F GL+ A + L + N++N +TVGF++ + +F+E+V + D V Sbjct: 2 GFQQGLSGLNAASKSLDVIGHNVANANTVGFKSGRAEFAEMVASAIGSADGLNAGIGVDV 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGK 120 GS TG LD A+ G +F L P G TR G FK+ DG++++ Sbjct: 62 AAVSQQFGQGSLTITGNNLDVAINGAGFFTLTLPDGTPAYTRSGNFKLDKDGNMITNDAA 121 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 + + G + I ++ + R Sbjct: 122 RVMGYPVDPATGLRTG-----AEPVGMVFPTSAPIPAKQTGTITAAFNLDARAPDAAGNP 176 Query: 181 IPPTPLEDLSGVT 193 P+ T Sbjct: 177 AAQPPVPATPRTT 189 Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 14/89 (15%), Positives = 32/89 (35%), Gaps = 5/89 (5%) Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEM 210 + L + +QG ++ P D + ++ G LEDSN + E+ Sbjct: 336 GQLALSRIRNAQGLAAVGSNNWVATHASGPAVVGTASDGNFGALRSGALEDSNVDLTAEL 395 Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIR 239 M+ + + + + ++ M + Sbjct: 396 VNMMTAQRTYQANAQTVKTQDQVMSTLVN 424 >gi|84514833|ref|ZP_01002196.1| hypothetical protein SKA53_11453 [Loktanella vestfoldensis SKA53] gi|84510992|gb|EAQ07446.1| hypothetical protein SKA53_11453 [Loktanella vestfoldensis SKA53] Length = 1778 Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 30/169 (17%), Positives = 70/169 (41%), Gaps = 5/169 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG--AIKNDIDQKISFVAS 61 SF L + +S ++N++N T GF+ + +F ++ ++N S Sbjct: 2 SFYTALTGLNGAQSDISATSNNIANVGTTGFKRSRAEFGDIFATSPLQNSSSSIGSGAIL 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWF---ALESPRGIILTRDGRFKVTDDGSLVSAS 118 G+ S+ LD A+ G +F ++ ++ TR+G F V ++ ++V +S Sbjct: 62 KGVKQQFTQGNIASSLNALDMAISGQGFFALKPSQTSTQVVYTRNGSFNVDNNRNVVDSS 121 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 G++ + + + KD + ++ ++ +V++ Sbjct: 122 GQFLLAYPVNEDGSVTAKDIDSAAPLRLPVTSGDPKATSLVDLAVNVPA 170 Score = 80.7 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 34/98 (34%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLED 201 + + K + + + + + G + N+ T ++ G LE Sbjct: 1678 YTNGQNKPLGKIVMANFNNQNGLKQVGNATFVQTAESGDPIIGEAGTEGFGSIQSGALER 1737 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ +I + F + + I+ + + I Sbjct: 1738 SNVDITEELVNLITAQRNFQAASKAIETSTQLTQTIIN 1775 >gi|30261751|ref|NP_844128.1| flagellar hook protein FlgE [Bacillus anthracis str. Ames] gi|47526975|ref|YP_018324.1| flagellar hook protein FlgE [Bacillus anthracis str. 'Ames Ancestor'] gi|49184583|ref|YP_027835.1| flagellar hook protein FlgE [Bacillus anthracis str. Sterne] gi|65319023|ref|ZP_00391982.1| COG1749: Flagellar hook protein FlgE [Bacillus anthracis str. A2012] gi|165869249|ref|ZP_02213908.1| putative flagellar hook protein FlgE [Bacillus anthracis str. A0488] gi|167633465|ref|ZP_02391790.1| putative flagellar hook protein FlgE [Bacillus anthracis str. A0442] gi|167639152|ref|ZP_02397425.1| putative flagellar hook protein FlgE [Bacillus anthracis str. A0193] gi|170686150|ref|ZP_02877372.1| putative flagellar hook protein FlgE [Bacillus anthracis str. A0465] gi|170706520|ref|ZP_02896980.1| putative flagellar hook protein FlgE [Bacillus anthracis str. A0389] gi|177650602|ref|ZP_02933569.1| putative flagellar hook protein FlgE [Bacillus anthracis str. A0174] gi|190566422|ref|ZP_03019340.1| putative flagellar hook protein FlgE [Bacillus anthracis Tsiankovskii-I] gi|227815486|ref|YP_002815495.1| putative flagellar hook protein FlgE [Bacillus anthracis str. CDC 684] gi|229600977|ref|YP_002866149.1| putative flagellar hook protein FlgE [Bacillus anthracis str. A0248] gi|254683244|ref|ZP_05147105.1| flagellar hook protein FlgE [Bacillus anthracis str. CNEVA-9066] gi|254723830|ref|ZP_05185616.1| flagellar hook protein FlgE [Bacillus anthracis str. A1055] gi|254734597|ref|ZP_05192309.1| flagellar hook protein FlgE [Bacillus anthracis str. Western North America USA6153] gi|254741006|ref|ZP_05198694.1| flagellar hook protein FlgE [Bacillus anthracis str. Kruger B] gi|254755249|ref|ZP_05207283.1| flagellar hook protein FlgE [Bacillus anthracis str. Vollum] gi|254759785|ref|ZP_05211809.1| flagellar hook protein FlgE [Bacillus anthracis str. Australia 94] gi|30255979|gb|AAP25614.1| putative flagellar hook protein FlgE [Bacillus anthracis str. Ames] gi|47502123|gb|AAT30799.1| putative flagellar hook protein FlgE [Bacillus anthracis str. 'Ames Ancestor'] gi|49178510|gb|AAT53886.1| flagellar hook protein FlgE, putative [Bacillus anthracis str. Sterne] gi|164714689|gb|EDR20207.1| putative flagellar hook protein FlgE [Bacillus anthracis str. A0488] gi|167512942|gb|EDR88315.1| putative flagellar hook protein FlgE [Bacillus anthracis str. A0193] gi|167531503|gb|EDR94181.1| putative flagellar hook protein FlgE [Bacillus anthracis str. A0442] gi|170128618|gb|EDS97485.1| putative flagellar hook protein FlgE [Bacillus anthracis str. A0389] gi|170669847|gb|EDT20588.1| putative flagellar hook protein FlgE [Bacillus anthracis str. A0465] gi|172083746|gb|EDT68806.1| putative flagellar hook protein FlgE [Bacillus anthracis str. A0174] gi|190562557|gb|EDV16524.1| putative flagellar hook protein FlgE [Bacillus anthracis Tsiankovskii-I] gi|227006608|gb|ACP16351.1| putative flagellar hook protein FlgE [Bacillus anthracis str. CDC 684] gi|229265385|gb|ACQ47022.1| putative flagellar hook protein FlgE [Bacillus anthracis str. A0248] Length = 437 Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 61/181 (33%), Gaps = 13/181 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49 M + + A + LS ++N++N TVG++ K F +++ Sbjct: 1 MIKALYTSITGMNAAQNALSVTSNNIANAQTVGYKKQKAIFDDLLYNNTVGSRGDGAYAG 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF--ALESPRGIILTRDGRFK 107 + + V GS T +++ A+EG+ F + + TR G F Sbjct: 61 TNPKSIGNGVKFSGTSTDFSDGSITLTSDKMETAIEGNGLFLVGDRNAGNVEYTRKGSFG 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 V+ D + + G+Y + Q + S G + ++ + Sbjct: 121 VSKDNYVTTTGGQYVLGYGVKTGTQEIDFSSRPSPIHIPMGSAVGGIQTDKATIGGNLPR 180 Query: 168 G 168 Sbjct: 181 N 181 Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats. Identities = 18/144 (12%), Positives = 40/144 (27%), Gaps = 9/144 (6%) Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 G +S + + I + G + KV+ + + + Sbjct: 298 SGLTNYPTGKTLSTTEVTGRPAAIANDYSISDGGFVMMKYSDGSM----KVVGQLAVATF 353 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 S G ++ N V+ E SN + E ++ + Sbjct: 354 PNSGGLMKTGNGNYVATPSAGIPGIGVAGENGAGNVRGSAKESSNVDLSVEFVDLMLYQR 413 Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242 F +I +++ + E + I Sbjct: 414 GFQGNAKVIKVSDEVLNEVVNLIR 437 >gi|187932866|ref|YP_001885049.1| flagellar hook protein FlgE [Clostridium botulinum B str. Eklund 17B] gi|187721019|gb|ACD22240.1| flagellar hook protein FlgE [Clostridium botulinum B str. Eklund 17B] Length = 366 Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 57/168 (33%), Gaps = 44/168 (26%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ + +L + +N++N T GF++ +FS+++ + Sbjct: 1 MLRSMYSGISGMKTNQVKLDVIGNNIANVSTTGFKSSSARFSDMLYQNAGEATAPTSTKG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--------- 99 Q G+ +STG LD ++GD + + + Sbjct: 61 GTNAKQVGLGAQLSSINKVMGQGNALSTGRSLDVCVDGDGYIMVSKGPEVYAGDKTGTGA 120 Query: 100 -----------------------LTRDGRFKVTDDGSLVSASGKYPVL 124 TRDG F + +G+L++A G + Sbjct: 121 DTKNTIGISTSGKLTGGGENEILYTRDGNFTLDHEGNLLTADGYRVMG 168 Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 12/99 (12%), Positives = 30/99 (30%), Gaps = 15/99 (15%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPL---------------EDLSGVTVKRGFL 199 + + + + +G + + + P +G L Sbjct: 264 LGQVAMATFKNPEGLTSIGGNLLQTSPNSGPEIIKTPVGKLATDFSDNSKGFGEFVQGAL 323 Query: 200 EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 E SN + + MI T+ F + + +I ++ + Sbjct: 324 ESSNVDLTEQFTDMITATRAFQASSKMITTGDEILQTIT 362 >gi|299822273|ref|ZP_07054159.1| flagellar hook protein FlgE [Listeria grayi DSM 20601] gi|299815802|gb|EFI83040.1| flagellar hook protein FlgE [Listeria grayi DSM 20601] Length = 411 Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 35/148 (23%), Positives = 60/148 (40%), Gaps = 13/148 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49 M + ++ A +Q LS ++N++N +T G++ V F++++ Sbjct: 1 MNQTMYTAISGMNAFQQALSVTSNNIANANTTGYKRQSVVFNDLLYQNTLGSVTSGLYAG 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107 + S G GS +TG D AL+G+ +F S + TRDG F Sbjct: 61 TNPMSFGSGTKIGAVITDYTAGSPTATGRNKDAALQGNGFFIAGDRSGGNAVYTRDGSFA 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQ 135 V+ D L + SGKY + + Sbjct: 121 VSSDNFLTTQSGKYVMGYATDKNGNVID 148 Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 19/142 (13%), Positives = 38/142 (26%), Gaps = 5/142 (3%) Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 F ++ + + P D +A +G+ + Sbjct: 269 DFDLSKMTNYETEQVFSPSSDGKGAATVKDFAVTDAGYIAVSYSDGTIIPVAQLGVATFS 328 Query: 165 MSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 G V+ N +P + + LE SN + E ++ Sbjct: 329 NVDGLVKNGNGEYTPGLSSGDPVFGVAGQNGAGGISGASLEGSNVDLSQEFVNLMTYQSG 388 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 F T +I + M + + I Sbjct: 389 FQGNTKVIRVADDVMKQIVNLI 410 >gi|228914332|ref|ZP_04077947.1| Flagellar hook protein FlgE [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228845326|gb|EEM90362.1| Flagellar hook protein FlgE [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 437 Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 61/181 (33%), Gaps = 13/181 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49 M + + A + LS ++N++N TVG++ K F +++ Sbjct: 1 MIKALYTSITGMNAAQNALSVTSNNIANAQTVGYKKQKAIFDDLLYNNTVGSRGDGAYAG 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF--ALESPRGIILTRDGRFK 107 + + V GS T +++ A+EG+ F + + TR G F Sbjct: 61 TNPKSIGNGVKFSGTSTDFSDGSITLTSDKMETAIEGNGLFLVGDRNGGNVEYTRKGSFS 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 V+ D + + G+Y + Q + S G + ++ + Sbjct: 121 VSKDSYVTNTGGQYVLGYGVKTGTQEVDFSSRPSPIHIPMGSAVGGIQTDKATIGGNLPR 180 Query: 168 G 168 Sbjct: 181 N 181 Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats. Identities = 18/144 (12%), Positives = 44/144 (30%), Gaps = 9/144 (6%) Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 G +S + + I + G + KV+ + + + Sbjct: 298 SGLTNYPTGKTLSTTEVTGRPAAIANDYSISDGGFVMMKYSDGSM----KVVGQLAVATF 353 Query: 164 DMSQGFVRR-ENSGISPNIPPTPLE----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 S G ++ + ++ P + V+ E SN + E ++ + Sbjct: 354 PNSGGLMKTGNGNYVATPSAGIPGVGVAGENGAGNVRGSAKESSNVDLSVEFVDLMLYQR 413 Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242 F +I +++ + E + I Sbjct: 414 GFQGNAKVIKVSDEVLNEVVNLIR 437 >gi|229144365|ref|ZP_04272771.1| Flagellar hook protein FlgE [Bacillus cereus BDRD-ST24] gi|228639152|gb|EEK95576.1| Flagellar hook protein FlgE [Bacillus cereus BDRD-ST24] Length = 437 Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 31/181 (17%), Positives = 62/181 (34%), Gaps = 13/181 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49 M + + A + LS ++N++N TVG++ K F +++ Sbjct: 1 MIKALYTSITGMNAAQNALSVTSNNIANAQTVGYKKQKAIFDDLLYNNTVGSRGDGAYAG 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF--ALESPRGIILTRDGRFK 107 + + V GS T +++ A+EG+ F + + TR G F Sbjct: 61 TNPKSIGNGVKFSGTSTDFSDGSITLTSDKMETAIEGNGLFLVGDRNSGNVEYTRKGSFS 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 V+ D + + SG+Y + Q + S G + ++ + Sbjct: 121 VSKDNYVTNTSGQYVLGYGVKTGTQEIDFSSRPSPIHIPMGSAVGGIQTDKATIGGNLPR 180 Query: 168 G 168 Sbjct: 181 N 181 Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 18/144 (12%), Positives = 40/144 (27%), Gaps = 9/144 (6%) Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 G +S + + I + G + KV+ + + + Sbjct: 298 SGLTNYPTGKTISTTEVTGRPAAIANDYSISDGGFVMMRYSDGSM----KVVGQLAVATF 353 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 S G ++ N V+ E SN + E ++ + Sbjct: 354 PNSGGLMKTGNGNYIATPSAGIPGIGVAGENGAGNVRGSAKESSNVDLSVEFVDLMLYQR 413 Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242 F +I +++ + E + I Sbjct: 414 GFQGNAKVIKVSDEVLNEVVNLIR 437 >gi|15964432|ref|NP_384785.1| flagellar hook protein FlgE [Sinorhizobium meliloti 1021] gi|307311574|ref|ZP_07591215.1| fagellar hook-basal body protein [Sinorhizobium meliloti BL225C] gi|20141447|sp|Q9X5Y0|FLGE_RHIME RecName: Full=Flagellar hook protein flgE gi|15073609|emb|CAC45251.1| Flagellar hook protein [Sinorhizobium meliloti 1021] gi|306899591|gb|EFN30220.1| fagellar hook-basal body protein [Sinorhizobium meliloti BL225C] Length = 406 Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 2/163 (1%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 G++ A RLSTVA+N++N +T G++ +FS ++ N V + Sbjct: 7 MRTGVSGMNAQSNRLSTVAENIANANTTGYKRASTEFSSMILPSGNGSYNSG-GVQTEVR 65 Query: 65 YLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASGKYPV 123 Y + G+ T + D A++G +F +E + LTR G F +G+LV+ASG + Sbjct: 66 YSISQQGATTFTTSASDLAIDGGGFFIVEGANGQEYLTRAGSFVPDSEGNLVNASGFTLM 125 Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 + F+ + ++ G + A S+ + Sbjct: 126 GYEYEAGVDPTVVVNGFDGLTRVNLASDGLIAAGSTKGSMGAN 168 Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 17/138 (12%), Positives = 39/138 (28%), Gaps = 7/138 (5%) Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 K T G +A G + S + + + + L +V Sbjct: 268 KTTQLGYAFNADGGSIDGNAPSKVAGYQIDSDGIVYVKYENGKLDPR--YRIALANVQSP 325 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFN 221 + S + + + + G LE SN + E+ MI + + Sbjct: 326 DKLRPESGNVYSQGVDSGVIITGFAGSGDFGEILSGALESSNVDIAEELTAMIESQRNYT 385 Query: 222 SITTLIDENEKSMLEAIR 239 + + + + + + Sbjct: 386 ANSKVFQTGSELLEVLVN 403 >gi|251780952|ref|ZP_04823872.1| flagellar hook protein FlgE [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243085267|gb|EES51157.1| flagellar hook protein FlgE [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 364 Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 60/161 (37%), Gaps = 37/161 (22%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50 M S G++ A + +L + +N++N T GF++ +F++++ + Sbjct: 1 MLRSMYSGISGMKANQVKLDVIGNNIANVSTTGFKSSSARFTDMLYQNTSSATAPTSTKG 60 Query: 51 --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP------------- 95 + Q G+ +STG LD ++GD + + + Sbjct: 61 GTNAKQVGLGAQLASINKVMGQGNALSTGRSLDVCVDGDGYLIVGTGPASYGGDDGTKGG 120 Query: 96 ------------RGIILTRDGRFKVTDDGSLVSASGKYPVL 124 I+ TRDG + +G+L++A G + Sbjct: 121 TSIVNGSISGGDMDILYTRDGNLTLDHEGNLLTADGYRVMG 161 Score = 76.1 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 13/96 (13%), Positives = 30/96 (31%), Gaps = 12/96 (12%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTP------------LEDLSGVTVKRGFLEDS 202 + + + S +G + + + P +G LE S Sbjct: 265 LGQVAMGSFKNPEGLTSVGGNLLEASSNSGPVIVKTSTGTTDGDNSKGFGDFIQGALEAS 324 Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 N + + MI T+ F + + +I ++ + Sbjct: 325 NVDLTEQFTDMITATRAFQASSKMISTADEILQTIT 360 >gi|57506151|ref|ZP_00372072.1| flagellar basal-body rod protein (flgG) [Campylobacter upsaliensis RM3195] gi|57015546|gb|EAL52339.1| flagellar basal-body rod protein (flgG) [Campylobacter upsaliensis RM3195] Length = 853 Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 58/183 (31%), Gaps = 14/183 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G++ A + + +N+SN +T GF+ + F + Sbjct: 1 MMRSLWSGVSGMQAHQIAMDVEGNNISNVNTAGFKYSRADFGTMFSQTVKIATVPTENLG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106 + Q + GS +T D A+ GD +F + LTRDG F Sbjct: 61 GQNPLQIGLGTSINSTTRIHSQGSVQTTNKNTDVAINGDGFFMVSDDGGLTRYLTRDGDF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 K+ G+ V+ +G + Q +T +++ Sbjct: 121 KLDAAGNFVNNAGFVVQGWNINWSDQSIDTSRSPKNLFIDPGLHIPAAKSTEVAVKANLN 180 Query: 167 QGF 169 G Sbjct: 181 SGL 183 Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats. Identities = 14/94 (14%), Positives = 35/94 (37%), Gaps = 5/94 (5%) Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNAN 205 K +A + + SV + G + + T +K LE SN + Sbjct: 757 KTFAVAKIAMASVANNSGLEEIGGNLFKVTGNSGNIVVGEAGTGGRGEMKTSALEMSNVD 816 Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + Q+I + + + + + I +++ + ++ Sbjct: 817 LSRSLTQLIVVQRGYQANSKTISTSDQMLNTLLQ 850 >gi|145298491|ref|YP_001141332.1| flagellar hook protein FlgE [Aeromonas salmonicida subsp. salmonicida A449] gi|142851263|gb|ABO89584.1| flagellar hook protein FlgE [Aeromonas salmonicida subsp. salmonicida A449] Length = 446 Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 34/130 (26%), Positives = 61/130 (46%), Gaps = 5/130 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK--NDIDQKISFVAS 61 SFN L+ A ++ L+ A+N++N +T+GF+ + +F++V N Q + VA+ Sbjct: 2 SFNNALSGVNAAQKDLNVTANNIANVNTMGFKESRAEFADVYANSIFVNAKTQVGNGVAT 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI---ILTRDGRFKVTDDGSLVSAS 118 G G+ T LD A++G+ +F TR G FK+ ++ +V+ Sbjct: 62 GAVAHQFHQGALQFTNNALDLAIQGNGFFVTSDGLTNLDRTYTRAGAFKLNENSYMVNNQ 121 Query: 119 GKYPVLDMAS 128 G Y + Sbjct: 122 GHYLQGYEIN 131 Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 13/90 (14%), Positives = 34/90 (37%), Gaps = 5/90 (5%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSNANSMYE 209 +A + L SQG + ++ + P + ++K +E SN + + Sbjct: 355 VAMVALAKFANSQGLTQVGDTSWRQSLLSGDALPGTPNSGTLGSIKSSAVEQSNVDLTSQ 414 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + +I + F + + ++ N ++ Sbjct: 415 LVNLITAQRNFQANSRSLEVNSSLQQTILQ 444 >gi|149911702|ref|ZP_01900310.1| flagellar hook protein FlgE [Moritella sp. PE36] gi|149805232|gb|EDM65249.1| flagellar hook protein FlgE [Moritella sp. PE36] Length = 435 Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 34/169 (20%), Positives = 68/169 (40%), Gaps = 5/169 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61 SFNI L+ A ++ L+T A+N++N +T GF+ + +F +V N + VA+ Sbjct: 2 SFNIALSGINAAQKDLNTTANNIANVNTTGFKESRAEFGDVYATSIFSNAKTSVGNGVAT 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII---LTRDGRFKVTDDGSLVSAS 118 + GS T LD A+ G+ +F + + TR G FK+ + + +++ Sbjct: 62 SHIAQQFQQGSLNFTENSLDLAINGNGFFVMADGLESMDRNYTRAGAFKLDANSFVTNSA 121 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 G Y + + + + ++++ Sbjct: 122 GNYLQVYDVNDDGSPKAVSMASTKPLQIPDTAGVPESTGNVDMTMNLPA 170 Score = 66.8 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 15/123 (12%), Positives = 38/123 (30%), Gaps = 5/123 (4%) Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN- 180 D A+V + + + + + + QG + ++G + Sbjct: 311 LEQDGATVGRLTGIDIGPDGMVLASYSNGRNDKLGMIAMAKFANEQGLSQTGDTGWRASQ 370 Query: 181 ----IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + + LE SN N E+ +I + + + + ++ N K Sbjct: 371 LSGAAIAGEANSGTFGKINSSALEQSNVNLTSELVNLITAQRNYQANSRTLEVNSKLQDT 430 Query: 237 AIR 239 ++ Sbjct: 431 VLQ 433 >gi|228933037|ref|ZP_04095900.1| Flagellar hook protein FlgE [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228826638|gb|EEM72409.1| Flagellar hook protein FlgE [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 437 Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 61/181 (33%), Gaps = 13/181 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49 M + + A + LS ++N++N TVG++ K F +++ Sbjct: 1 MIKALYTSITGMNAAQNALSVTSNNIANAQTVGYKKQKAIFDDLLYNNTVGSRGDGAYAG 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF--ALESPRGIILTRDGRFK 107 + + V GS T +++ A+EG+ F + + TR G F Sbjct: 61 TNPKSIGNGVKFSGTSTDFSDGSITLTSDKMETAIEGNGLFLVGDRNGGNVEYTRKGSFS 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 V+ D + + G+Y + Q + S G + ++ + Sbjct: 121 VSKDSYVTNTGGQYVLGYGVKTGTQEIDFSSRPSPIHIPMGSAVGGIQTDKATIGGNLPR 180 Query: 168 G 168 Sbjct: 181 N 181 Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats. Identities = 18/144 (12%), Positives = 40/144 (27%), Gaps = 9/144 (6%) Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 G +S + + I + G + KV+ + + + Sbjct: 298 SGLTNYPTGKTLSTTEVTGRPAAIANDYSISDGGFVMMKYSDGSM----KVVGQLAVATF 353 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 S G ++ N V+ E SN + E ++ + Sbjct: 354 PNSGGLMKTGNGNYVATPSAGIPGIGVAGENGAGNVRGSAKESSNVDLSVEFVDLMLYQR 413 Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242 F +I +++ + E + I Sbjct: 414 GFQGNAKVIKVSDEVLNEVVNLIR 437 >gi|311992301|gb|ADQ26724.1| flagellar hook protein [Aeromonas hydrophila] Length = 443 Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 5/130 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK--NDIDQKISFVAS 61 SFN L+ A ++ L+ A+N++N +T GF+ + +F++V N Q + VA+ Sbjct: 1 SFNNALSGVNAAQKDLNVTANNIANVNTTGFKESRAEFADVYANSIFVNAKTQVGNGVAT 60 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI---ILTRDGRFKVTDDGSLVSAS 118 G G+ T LD +++G+ +F TR G FK+ ++ +V+ Sbjct: 61 GAVAQQFHQGALQFTNNALDLSIQGNGFFVTSDGLTNLDRTFTRAGAFKLNENSYMVNNQ 120 Query: 119 GKYPVLDMAS 128 G Y + Sbjct: 121 GNYLQGYEIN 130 Score = 65.3 bits (157), Expect = 7e-09, Method: Composition-based stats. Identities = 21/151 (13%), Positives = 47/151 (31%), Gaps = 9/151 (5%) Query: 94 SPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK 153 P + R G V+ D A+V + + + Sbjct: 295 DPTQTLEIRLGDVTQYSSPFNVT----KLTQDGATVGNLTKVEITPDGIVSATYSNATTL 350 Query: 154 VIATMGLYSVDMSQGFVRRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSNANSMY 208 +A + L SQG + ++ + P + ++K LE SN + Sbjct: 351 KVAMVALAKFANSQGLTQVGDTSWRQSLLSGDALPGTPNSGTLGSIKSSALEQSNVDLTS 410 Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 ++ +I + F + + ++ N ++ Sbjct: 411 QLVNLITAQRNFQANSRSLEVNSSLQQTILQ 441 >gi|196033295|ref|ZP_03100707.1| putative flagellar hook protein FlgE [Bacillus cereus W] gi|195993729|gb|EDX57685.1| putative flagellar hook protein FlgE [Bacillus cereus W] Length = 437 Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 36/222 (16%), Positives = 71/222 (31%), Gaps = 20/222 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49 M + + A + LS ++N++N TVG++ K F +++ Sbjct: 1 MIKALYTSITGMNAAQNALSVTSNNIANAQTVGYKKQKAIFDDLLYNNTVGSRGDGAYAG 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF--ALESPRGIILTRDGRFK 107 + + V GS T +++ A+EG+ F + + TR G F Sbjct: 61 TNPKSIGNVVKFSGTSTDFSDGSITLTSDKMETAIEGNGLFLVGDRNAGNVEYTRKGSFS 120 Query: 108 VTDDGSLVSASGKYPVL-------DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 V+ D + + G+Y + + G + K + + Sbjct: 121 VSKDSYVTNTGGQYVLGYGVKTGTQEIDFSSRPSPIHIPMGSAVGGIQTDKATIGGNLPR 180 Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDS 202 +S F + G S + + TV +E Sbjct: 181 NQNALSHEFTVFDAEGNSLTLRVNIKQKTESETVDGKVVEKP 222 Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats. Identities = 18/144 (12%), Positives = 40/144 (27%), Gaps = 9/144 (6%) Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 G +S + + I + G + KV+ + + + Sbjct: 298 SGLTNYPTGKTLSTTEVTGRPAAIANDYSISDGGFVMMKYSDGSM----KVVGQLAVATF 353 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 S G ++ N V+ E SN + E ++ + Sbjct: 354 PNSGGLMKTGNGNYVATPSAGIPGIGVAGENGAGNVRGSAKESSNVDLSVEFVDLMLYQR 413 Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242 F +I +++ + E + I Sbjct: 414 GFQGNAKVIKVSDEVLNEVVNLIR 437 >gi|218461961|ref|ZP_03502052.1| flagellar hook protein FlgE [Rhizobium etli Kim 5] Length = 316 Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 44/183 (24%), Positives = 74/183 (40%), Gaps = 10/183 (5%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 S ++ A RLSTVADN++N +T G++ + FS +V + V + Sbjct: 6 SMKTAVSGMNAQANRLSTVADNIANVNTTGYKAVSTSFSSLVLPSSGG-NYNSGGVQTSV 64 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGKYP 122 + G T + D A+ GD +F ++ P G +LTR G F+ D+G+LV+A+G Sbjct: 65 RQAVSDQGDISYTTSTTDLAISGDGFFIVQGPDGTPVLTRAGDFQKDDEGNLVNAAGFQL 124 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + V G + GL ++ + G + + P Sbjct: 125 MGYSY--------DSGAPAVVVNGFDGLVPVNVNQEGLTAIASTSGVFKGNLDSNAKVAP 176 Query: 183 PTP 185 P Sbjct: 177 VAP 179 >gi|117620743|ref|YP_857343.1| flagellar hook protein FlgE [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117562150|gb|ABK39098.1| flagellar hook protein FlgE [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 444 Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 5/130 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK--NDIDQKISFVAS 61 SFN L+ A ++ L+ A+N++N +T GF+ + +F++V N Q + VA+ Sbjct: 2 SFNNALSGVNAAQKDLNVTANNIANVNTTGFKESRAEFADVYANSIFVNAKTQVGNGVAT 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI---ILTRDGRFKVTDDGSLVSAS 118 G G+ T LD +++G+ +F TR G FK+ ++ +V+ Sbjct: 62 GAVAQQFHQGALQFTNNALDLSIQGNGFFVTSDGLTNLDRTFTRAGAFKLNENSYMVNNQ 121 Query: 119 GKYPVLDMAS 128 G Y + Sbjct: 122 GNYLQGYEIN 131 Score = 65.3 bits (157), Expect = 8e-09, Method: Composition-based stats. Identities = 21/151 (13%), Positives = 47/151 (31%), Gaps = 9/151 (5%) Query: 94 SPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK 153 P + R G V+ D A+V + + + Sbjct: 296 DPAQTLEIRLGDVTQYSSPFNVT----KLTQDGATVGNLTKVEITPDGIVSATYSNATTL 351 Query: 154 VIATMGLYSVDMSQGFVRRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSNANSMY 208 +A + L SQG + ++ + P + ++K LE SN + Sbjct: 352 KVAMVALAKFANSQGLTQVGDTSWRQSLLSGDALPGTPNSGTLGSIKSSALEQSNVDLTS 411 Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 ++ +I + F + + ++ N ++ Sbjct: 412 QLVNLITAQRNFQANSRSLEVNSSLQQTILQ 442 >gi|330953723|gb|EGH53983.1| flagellar hook protein FlgE [Pseudomonas syringae Cit 7] Length = 581 Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 28/133 (21%), Positives = 55/133 (41%), Gaps = 3/133 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SFN ++ A +RL +N++N T+GF++ + +FS + + + Q Sbjct: 2 SFNTAISGIQAANKRLEVAGNNIANVGTLGFKSSRAQFSALYASAQLGAGQHAVGDGVRL 61 Query: 64 EYLSKEVGSFI---STGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + + S+G LD ++G+ +F + + TR G F +V + G Sbjct: 62 ASVQQNFNQGETVISSGNALDMRIQGNGFFVVSDQGSLAYTRAGAFLKDAANFVVDSDGG 121 Query: 121 YPVLDMASVPIQI 133 A+ +I Sbjct: 122 RLQGYAANDKGEI 134 Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 31/99 (31%), Gaps = 5/99 (5%) Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLE 200 G + K I + L S G R ++ + E + + G LE Sbjct: 481 GFTNGMTKDIGQVMLASFANPHGLQPRSDTRWTATADSGVAEYDVPGVGTLGGIVSGALE 540 Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN E+ +I + + + I M I+ Sbjct: 541 GSNVVLADELIALIQAQTAYQANSKAISTEVTLMQTLIQ 579 >gi|196044997|ref|ZP_03112230.1| putative flagellar hook protein FlgE [Bacillus cereus 03BB108] gi|300117326|ref|ZP_07055116.1| flagellar hook protein FlgE [Bacillus cereus SJ1] gi|196023999|gb|EDX62673.1| putative flagellar hook protein FlgE [Bacillus cereus 03BB108] gi|298725161|gb|EFI65813.1| flagellar hook protein FlgE [Bacillus cereus SJ1] Length = 437 Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 61/181 (33%), Gaps = 13/181 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49 M + + A + LS ++N++N TVG++ K F +++ Sbjct: 1 MIKALYTSITGMNAAQNALSVTSNNIANAQTVGYKKQKAIFDDLLYNNTVGSRGDGAYAG 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF--ALESPRGIILTRDGRFK 107 + + V GS T +++ A+EG+ F + + TR G F Sbjct: 61 TNPKSIGNGVKFSGTSTDFSDGSITLTSDKMETAIEGNGLFLVGDRNAGNVEYTRKGSFG 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 V+ D + + G+Y + Q + S G + ++ + Sbjct: 121 VSKDNYVTTTGGQYVLGYGVKTGTQEIDFSSRPSPIHIPMGSAVGGIQTDKATIGGNLPR 180 Query: 168 G 168 Sbjct: 181 N 181 Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats. Identities = 18/144 (12%), Positives = 40/144 (27%), Gaps = 9/144 (6%) Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 G +S + + I + G + KV+ + + + Sbjct: 298 SGLTNYPTGKTLSTTEVTGRPAAIANDYSISDGGFVMMKYSDGSM----KVVGQLAVATF 353 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 S G ++ N V+ E SN + E ++ + Sbjct: 354 PNSGGLMKTGNGNYVATPSAGIPGIGVAGENGAGNVRGSAKESSNVDLSVEFVDLMLYQR 413 Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242 F +I +++ + E + I Sbjct: 414 GFQGNAKVIKVSDEVLNEVVNLIR 437 >gi|296502373|ref|YP_003664073.1| flagellar basal body rod protein FlgG [Bacillus thuringiensis BMB171] gi|296323425|gb|ADH06353.1| flagellar basal body rod protein FlgG [Bacillus thuringiensis BMB171] Length = 246 Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 43/244 (17%), Positives = 81/244 (33%), Gaps = 15/244 (6%) Query: 13 LALEQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DIDQKISFVASGKE 64 + QR++ ++N++N T GF+ + + +I V Sbjct: 1 MNYMQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIGSVDYAVVPAAT 60 Query: 65 YLSKEVGSFISTGTELDF-----ALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119 +++ G+ T + DF A ++F LTRDG F + D L ++SG Sbjct: 61 HVNLVQGNIQMTNSATDFFLDDGAAGTTSFFVTSKNDETFLTRDGSFTLNSDRYLQTSSG 120 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG--FVRRENSGI 177 + + + IA + +VD V+REN Sbjct: 121 AFVMGENNERIRIPEGAKVAVQADGTLYDEVTQNNIARLQTKTVDAETNARLVQRENKSF 180 Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + VK LE+SN + EM ++ + + ++ +K + Sbjct: 181 TLAEGNIANLPNGTGIVKNHMLENSNVDMTKEMADLMTDQKMIQASQRVMTSFDKIYEKE 240 Query: 238 IRNI 241 I Sbjct: 241 ANEI 244 >gi|219670133|ref|YP_002460568.1| hypothetical protein Dhaf_4123 [Desulfitobacterium hafniense DCB-2] gi|219540393|gb|ACL22132.1| protein of unknown function DUF1078 domain protein [Desulfitobacterium hafniense DCB-2] Length = 329 Score = 91.1 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 57/146 (39%), Gaps = 13/146 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55 N A + L + +NMSN +T G++ +V F+E + A +++ Sbjct: 1 MRILNTAATGVRAQQTALDVLGNNMSNVNTPGYKAQRVNFAEALAAEMRPAEREFNGQPV 60 Query: 56 ------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKV 108 + V G T D A++G+ +F + + G TR G F++ Sbjct: 61 GERIDVGAGVIYPTIDTDYRQGIIRETENPFDLAIDGEGFFPVRTANGESRYTRVGNFEL 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIP 134 G LV++ G + + + + + Sbjct: 121 DSQGKLVNSDGYILEVKIPADAMDLY 146 Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 21/149 (14%), Positives = 48/149 (32%), Gaps = 14/149 (9%) Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 + + G + +G +VP I + + + + + Sbjct: 182 IDMDELGRPLDWNGDILP-TAFAVPEGAEDVQISTEGILSATIDGSRQTLGQINIITFAN 240 Query: 166 SQGFVRRENSGISPNI------------PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQM 213 +G VR ++ P + +E+ + +K LE SN N M +M Sbjct: 241 PEGLVRDGDNLYFAPDAAGVTGDELVGTPGSQVEERTLGKLKTQSLEQSNVNLASAMTEM 300 Query: 214 IHLTQKFNSITTLIDENEKSMLEAIRNIA 242 I + + + +I ++ M ++ Sbjct: 301 IQVQRAYQLNARMITNGDQ-MWSMANSLR 328 >gi|326204617|ref|ZP_08194473.1| fagellar hook-basal body protein [Clostridium papyrosolvens DSM 2782] gi|325985184|gb|EGD46024.1| fagellar hook-basal body protein [Clostridium papyrosolvens DSM 2782] Length = 443 Score = 90.7 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 30/147 (20%), Positives = 53/147 (36%), Gaps = 16/147 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ A + ++ + +N++N +T+GF+ +V F E+ Sbjct: 1 MMRSMFSGVSGLKAHQAKMDVIGNNVANVNTLGFKAGRVTFQEIFNQTLRGAGAPDAATA 60 Query: 54 -------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDG 104 Q +A G GS T D ++ G+ +F ++ TR G Sbjct: 61 RGGTNPMQIGLGIAVGSIDNQMTGGSPQRTDNPTDLSISGNGFFIVKGSAADTFKFTRAG 120 Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPI 131 F + G+LVS G Sbjct: 121 NFGLDKLGNLVSGDGMNVYGWTKYEQQ 147 Score = 86.8 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 17/123 (13%), Positives = 40/123 (32%), Gaps = 6/123 (4%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 ++ + + + + + + + + L D G + + P Sbjct: 318 NINGYTTGNLVTFNIGSDGMITGVYSNGQQQPLGLIALAGFDNPAGLQKVGGNLFMPTTN 377 Query: 183 ------PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 P T+ G LE SN + E MI + F + + +I +++ + E Sbjct: 378 SGDFNKGVPAGSQGVGTLSPGTLEMSNVDLSREFTDMIVTQRGFQANSRIITTSDEMLQE 437 Query: 237 AIR 239 + Sbjct: 438 LVN 440 >gi|255099422|ref|ZP_05328399.1| flagellar hook protein [Clostridium difficile QCD-63q42] Length = 327 Score = 90.7 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 36/87 (41%), Gaps = 1/87 (1%) Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIP-PTPLEDLSGVTVKRGFLEDSNANSMYEMGQ 212 I + Y+ G + P+ P + T+ +G +E SN + E + Sbjct: 238 TIQKVQTYAFQNPAGLDAEGGNLFKPSANSGDPQIAGATGTIIQGAIEASNVDIAEEFTE 297 Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIR 239 MI ++ F + + +I +++ + E I Sbjct: 298 MIIASRSFQANSKIISTSDEILQEIIN 324 Score = 89.2 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 24/143 (16%), Positives = 49/143 (34%), Gaps = 17/143 (11%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M + G++ A + +L + +N++N T F+ + ++ Sbjct: 1 MIKAMYSGVSGMKANQTKLDVIGNNVANAGTTSFKKSSARITDSFYQTVLYASAPTAALG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 ++ Q G+ T D ++GD + + ++ TRDG F + Sbjct: 61 GTNLGQVGVGSKISSINKDMVQGNVQPTNRPSDLMIDGDGYLPVVRQGTVMYTRDGSFNL 120 Query: 109 T-----DDGSLVSASGKYPVLDM 126 DG+L + G V Sbjct: 121 DTGFKAADGALKNIKGGRLVNGD 143 >gi|157961171|ref|YP_001501205.1| flagellar hook protein FlgE [Shewanella pealeana ATCC 700345] gi|157846171|gb|ABV86670.1| flagellar basal body FlaE domain protein [Shewanella pealeana ATCC 700345] Length = 453 Score = 90.7 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 38/185 (20%), Positives = 72/185 (38%), Gaps = 5/185 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61 SFNI L+ + ++ L+T A+N++N +T GF+ + +F++V + N VA+ Sbjct: 2 SFNIALSGISSAQKDLNTTANNIANVNTTGFKESRAEFADVYASSIFANSKTTVGGGVAT 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESP---RGIILTRDGRFKVTDDGSLVSAS 118 + GS T LD A+ G +F S + TR G FK + +V ++ Sbjct: 62 SQVAQQFHQGSMQFTNNSLDMAINGGGFFVTSSEVGSQDHSFTRAGAFKFDSNNYIVDSA 121 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178 G + + + V ++++ G + + Sbjct: 122 GNFLQTFPVDKDGNSTSVSLTTTKPVQIPDTAGSPVKTDQVGIQMNLNAGESTLDPAAFD 181 Query: 179 PNIPP 183 P+ P Sbjct: 182 PDDPE 186 Score = 69.1 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 15/91 (16%), Positives = 35/91 (38%), Gaps = 5/91 (5%) Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMY 208 +A + L S QG + N+ ++ P + +++ LE SN + Sbjct: 361 PLARVALVSFANEQGLSQAGNTSWKASLDSGPALAGEANSGTFGSIRSSALEQSNVDLTT 420 Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E+ +I + F + + ++ N ++ Sbjct: 421 ELVDLISAQRNFQANSRTLEVNNTLQQTVLQ 451 >gi|120598232|ref|YP_962806.1| flagellar hook protein FlgE [Shewanella sp. W3-18-1] gi|120558325|gb|ABM24252.1| flagellar basal body FlaE domain protein [Shewanella sp. W3-18-1] Length = 453 Score = 90.7 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 40/125 (32%), Positives = 61/125 (48%), Gaps = 5/125 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61 SFNI L+ A ++ L+T A+N++N +TVGF+ + +F++V N VA+ Sbjct: 2 SFNIALSGISAAQKDLNTTANNIANANTVGFKESRAEFADVYANSIFSNSKTAVGGGVAT 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII---LTRDGRFKVTDDGSLVSAS 118 + GS T LD A++G +F S G + TR G FKV +V +S Sbjct: 62 SQVAQQFHQGSLQLTNNSLDLAIKGGGFFVTSSELGTLDFSYTRAGAFKVDASNYMVDSS 121 Query: 119 GKYPV 123 G Y Sbjct: 122 GNYLQ 126 Score = 65.7 bits (158), Expect = 5e-09, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 33/91 (36%), Gaps = 5/91 (5%) Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMY 208 +A + L QG + N+ ++ P + ++ LE SN + Sbjct: 361 PLARVALVRFANEQGLTQVGNTSWKASLNSGPALAGEANSGTFGSISSSALEQSNIDLTT 420 Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E+ +I + F + + ++ N ++ Sbjct: 421 ELVDLISAQRNFQANSRTLEVNNTLQQTVLQ 451 >gi|196039080|ref|ZP_03106387.1| putative flagellar hook protein FlgE [Bacillus cereus NVH0597-99] gi|196030225|gb|EDX68825.1| putative flagellar hook protein FlgE [Bacillus cereus NVH0597-99] Length = 437 Score = 90.7 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 61/181 (33%), Gaps = 13/181 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49 M + + A + LS ++N++N TVG++ K F +++ Sbjct: 1 MIKALYTSITGMNAAQNALSVTSNNIANAQTVGYKKQKAIFDDLLYNNTVGSRGDGAYAG 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF--ALESPRGIILTRDGRFK 107 + + V GS T +++ A+EG+ F + + TR G F Sbjct: 61 TNPKSIGNGVKFSGTSTDFSDGSITLTSDKMETAIEGNGLFLVGDRNAGNVEYTRKGSFS 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 V+ D + + G+Y + Q + S G + ++ + Sbjct: 121 VSKDSYVTNTGGQYVLGYGVKTGTQEVDFSSRPSPIHIPMGSAVGGIQTDKATIGGNLPR 180 Query: 168 G 168 Sbjct: 181 N 181 Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats. Identities = 18/144 (12%), Positives = 40/144 (27%), Gaps = 9/144 (6%) Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 G +S + + I + G + KV+ + + + Sbjct: 298 SGLTNYPTGKTLSTTEVTGRPAAIANDYSISDGGFVMMKYSDGSM----KVVGQLAVATF 353 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 S G ++ N V+ E SN + E ++ + Sbjct: 354 PNSGGLMKTGNGNYVATPSAGIPGIGVAGENGAGNVRGSAKESSNVDLSVEFVDLMLYQR 413 Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242 F +I +++ + E + I Sbjct: 414 GFQGNAKVIKVSDEVLNEVVNLIR 437 >gi|317152826|ref|YP_004120874.1| flagellar hook-basal body protein [Desulfovibrio aespoeensis Aspo-2] gi|316943077|gb|ADU62128.1| flagellar hook-basal body protein [Desulfovibrio aespoeensis Aspo-2] Length = 515 Score = 90.7 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 37/193 (19%), Positives = 64/193 (33%), Gaps = 13/193 (6%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI---KNDIDQKISFVA 60 S G++ A Q S V++N++N+ T +++ + F +V + + Q + V Sbjct: 6 SMYTGISGLKAQSQATSVVSNNLANSTTTAYKSSSITFEDVFYSTVYAGGSVGQVGNGVT 65 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR--GIILTRDGRFKVTDDGSLVSAS 118 GS+ ST + D A+ G+ ++ + P TR G F +G L A Sbjct: 66 VASVNTDYSQGSYESTNSATDVAINGNGFYVVIDPDTGNTYYTRAGNFTFNTEGYLEDAH 125 Query: 119 GKYPVLDMASV--------PIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170 G + I I Q N + S T S + Sbjct: 126 GNKVQGWAMNDGSIEGTLTDIVIDQSQSPPNATSEVGFSLNLDSTETDHTTSATNPYAAL 185 Query: 171 RRENSGISPNIPP 183 G + Sbjct: 186 FEAYDGTADPALG 198 Score = 68.0 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 19/121 (15%), Positives = 43/121 (35%), Gaps = 5/121 (4%) Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183 D + + I + V + + + + T+ L + +QG + ++ S Sbjct: 392 QDGYAPGVLINVAIDENGVLSGEYTNGQTQELYTIALANFTNTQGLSSQGSNLYSATTES 451 Query: 184 TPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 T+ LE SN ++ E+ ++I L + + +I + + AI Sbjct: 452 GQAFIGTPGSAGFGTIASNSLEQSNVDTATELTKLIILQAAYQANAKVITTADTLLSAAI 511 Query: 239 R 239 Sbjct: 512 S 512 >gi|301053291|ref|YP_003791502.1| flagellar hook protein [Bacillus anthracis CI] gi|300375460|gb|ADK04364.1| flagellar hook protein [Bacillus cereus biovar anthracis str. CI] Length = 437 Score = 90.7 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 61/181 (33%), Gaps = 13/181 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49 M + + A + LS ++N++N TVG++ K F +++ Sbjct: 1 MIKALYTSITGMNAAQNALSVTSNNIANAQTVGYKKQKAIFDDLLYNNTVGSRGDGAYAG 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF--ALESPRGIILTRDGRFK 107 + + V GS T +++ A+EG+ F + + TR G F Sbjct: 61 TNPKSIGNGVKFSGTSTDFSDGSITLTSDKMETAIEGNGLFLVGDRNAGNVEYTRKGSFG 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 V+ D + + G+Y + Q + S G + ++ + Sbjct: 121 VSKDNYVTTTGGQYVLGYGVKTGTQEIDFSSRPSPIHIPMGSAVGGIQTDKATIGGNLPR 180 Query: 168 G 168 Sbjct: 181 N 181 Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats. Identities = 18/144 (12%), Positives = 40/144 (27%), Gaps = 9/144 (6%) Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 G +S + + I + G + KV+ + + + Sbjct: 298 SGLTNYPTGKTLSTTEVTGRPAAIANDYSISDGGFVMMKYSDGSM----KVVGQLAVATF 353 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 S G ++ N V+ E SN + E ++ + Sbjct: 354 PNSGGLMKTGNGNYVATPSAGIPGIGVAGENGAGNVRGSAKESSNVDLSVEFVDLMLYQR 413 Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242 F +I +++ + E + I Sbjct: 414 GFQGNAKVIKVSDEVLNEVVNLIR 437 >gi|320353949|ref|YP_004195288.1| flagellar hook-basal body protein [Desulfobulbus propionicus DSM 2032] gi|320122451|gb|ADW17997.1| flagellar hook-basal body protein [Desulfobulbus propionicus DSM 2032] Length = 423 Score = 90.7 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 35/170 (20%), Positives = 66/170 (38%), Gaps = 5/170 (2%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI---KNDIDQKISFV 59 ++ ++ Q ++ +N++N+ TVGF+T FS+++ A + Q Sbjct: 5 SALFTAISGLQGSSQAMTVTGNNIANSSTVGFKTSSTVFSDLLSANIASSSGNSQVGRGS 64 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP--RGIILTRDGRFKVTDDGSLVSA 117 S G F ST + D A+EG +F + P + TR+G F DDG LV+A Sbjct: 65 QVQTVQTSFSQGGFESTESATDIAIEGSGFFIVGDPLSDTSLYTRNGNFSFDDDGYLVTA 124 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 G + + + + + + ++D + Sbjct: 125 DGYRVQGSTYNANGVLASGNLSDIQVDLVSQIKAKRTENVTLQTNLDSNS 174 Score = 74.9 bits (182), Expect = 8e-12, Method: Composition-based stats. Identities = 19/146 (13%), Positives = 42/146 (28%), Gaps = 4/146 (2%) Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 T+ + ++ D + + + +A + L Sbjct: 278 TQQLAYVFDTTQFDSDSTVFSQDQDGYASGEVTDVDIAADGTVSAVYSNGETIPVAMIAL 337 Query: 161 YSVDMSQGFVRRENSGISPN----IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + S G +S P S T+ LE SN + E +I + Sbjct: 338 ATFINSDGLDAVGSSLYRETGESGTPTIGYPGASQGTLITQALELSNVDLATEFVDLITI 397 Query: 217 TQKFNSITTLIDENEKSMLEAIRNIA 242 +++ + +I + + E + I Sbjct: 398 QNAYSANSKVITTTNEMLDELVNLIR 423 >gi|126668558|ref|ZP_01739512.1| flagellar hook protein E [Marinobacter sp. ELB17] gi|126626963|gb|EAZ97606.1| flagellar hook protein E [Marinobacter sp. ELB17] Length = 435 Score = 90.7 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 35/157 (22%), Positives = 65/157 (41%), Gaps = 2/157 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA--IKNDIDQKISFVAS 61 +FN GL+ A L +N++N TVGF+ +V+F ++ + + ++ Sbjct: 2 AFNTGLSGLRAAAVDLDVTGNNIANASTVGFKGSRVQFGDLYANGFLSSGNAPVGDGISV 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 S G+ T LDFA++GD +F L + + +R G+F DG +V+ Sbjct: 62 QSVKQSFGQGNVSFTDNGLDFAIDGDGFFVLNNGGELRYSRAGQFGTDKDGFVVNNQNMR 121 Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158 +A + + +G Q+ + T Sbjct: 122 VQGFVADAAGNLSGIRDDLQIGSDNLSPQRTTNLRTD 158 Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 11/98 (11%), Positives = 34/98 (34%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLED 201 + + K + + L S + + G ++ + + ++ +E+ Sbjct: 336 YTNGQSKSLGQVALASFNNTDGLSPSGDTSWVETFESGQAVIGRPDSGTLGAIQSSSVEE 395 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ +I + + + I+ ++ I Sbjct: 396 SNVDLSAELVNLIIAQRNYQANAKTIETSDAVTQTIIN 433 >gi|57505769|ref|ZP_00371695.1| flagellar basal-body rod protein (flgG) [Campylobacter upsaliensis RM3195] gi|57016042|gb|EAL52830.1| flagellar basal-body rod protein (flgG) [Campylobacter upsaliensis RM3195] Length = 545 Score = 90.7 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 45/217 (20%), Positives = 80/217 (36%), Gaps = 11/217 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI----KNDIDQKI 56 M +F G++ + A+N++N +T GF+ +F ++ + + Q Sbjct: 1 MMGAFYNGISGVKINSFGIDISANNIANVNTTGFKYSNAEFKDIFYSTITSQSTNPAQGG 60 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLV 115 S L E GS +++ E D AL+G +F + + TR+G FK +G LV Sbjct: 61 YGSTSASSKLVFEQGSPVASEGEFDVALQGKGFFGVLGADGMPYYTRNGAFKRDANGHLV 120 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 + G + + M I D + G G+ G + + + + Sbjct: 121 DSYGNFVLGTMNPAFQGITYSDRV--AGLMGDYLNTGTPVNNGFTVNSNDKFTLGTTGSQ 178 Query: 176 GISPNIPPTPLEDLSGVTVKR-GFLEDSNANSMYEMG 211 G L V+ G L N N+ E+ Sbjct: 179 GALQVPINMYLPPKVTQNVQWKGNL---NTNTKTEVV 212 Score = 76.1 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 41/96 (42%), Gaps = 7/96 (7%) Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPP-------TPLEDLSGVTVKRGFLEDSN 203 + ++ + LY+ QG + ++ + E ++ K GFLE SN Sbjct: 447 QTAIVGKIALYNFINEQGLMAMGDNIFAATGNSGEASFIMKDGEIVNTAKFKGGFLEQSN 506 Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 N E+ +I + F++ + I +++ + +AI Sbjct: 507 VNLSMELSNLIVTQRAFDASSKSITTSDQMIQKAIN 542 >gi|190890382|ref|YP_001976924.1| flagellar hook protein [Rhizobium etli CIAT 652] gi|190695661|gb|ACE89746.1| flagellar hook protein [Rhizobium etli CIAT 652] Length = 433 Score = 90.7 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 2/125 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 S ++ A RLSTV+DN++N +T G++ + FS +V + V + Sbjct: 6 SMKTAVSGMNAQANRLSTVSDNIANVNTTGYKAVSTSFSSLVLPSSGG-NYNSGGVQTSV 64 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGKYP 122 + G T + D A+ GD +F ++ P G +LTR G F D+G+LV+A+G Sbjct: 65 RQAVSDQGDISYTTSTTDLAISGDGFFIVQGPDGTPVLTRAGDFTKDDEGNLVNAAGFQL 124 Query: 123 VLDMA 127 + Sbjct: 125 MGYSY 129 Score = 73.4 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 17/121 (14%), Positives = 35/121 (28%), Gaps = 1/121 (0%) Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178 + V I + + + + + G V N Sbjct: 311 NGQAATPVKDVTIDGDGIVYAKYEDGSTKPLYRIPLANVASPDKLTLMSGNVYSANGQSG 370 Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 + P + T+K G LE SN + E+ +MI + + + + + M + Sbjct: 371 VTVTGFPQTNG-LGTIKSGALEGSNVDLAGELTEMIEAQRSYTANSKVFQTGSDIMDVLV 429 Query: 239 R 239 Sbjct: 430 N 430 >gi|188587648|ref|YP_001920210.1| flagellar hook protein FlgE [Clostridium botulinum E3 str. Alaska E43] gi|188497929|gb|ACD51065.1| flagellar hook protein FlgE [Clostridium botulinum E3 str. Alaska E43] Length = 366 Score = 90.7 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 58/168 (34%), Gaps = 44/168 (26%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ + +L + +N++N T GF++ +FS+++ ++ Sbjct: 1 MLRSMYSGISGMKTNQVKLDVIGNNIANVSTTGFKSSSARFSDMLYQNASEATAPTSTKG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--------- 99 Q G+ +STG LD ++GD + + + Sbjct: 61 GTNAKQVGLGSQLSSINKVMGQGNALSTGRSLDVCVDGDGYIMVSKGPEVYAADKTGTGA 120 Query: 100 -----------------------LTRDGRFKVTDDGSLVSASGKYPVL 124 TRDG F + +G+L++A G + Sbjct: 121 DAKNTIGISTSGKLTGGGENEILYTRDGNFTLDHEGNLLTADGYRVMG 168 Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 12/99 (12%), Positives = 30/99 (30%), Gaps = 15/99 (15%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPL---------------EDLSGVTVKRGFL 199 + + + + +G + + + P +G L Sbjct: 264 LGQVAMATFKNPEGLTSIGGNLLQTSPNSGPEIIKTPVGKLATDFSDNSKGFGEFVQGAL 323 Query: 200 EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 E SN + + MI T+ F + + +I ++ + Sbjct: 324 ESSNVDLTEQFTDMITATRAFQASSKMITTGDEILQTIT 362 >gi|330967091|gb|EGH67351.1| flagellar hook protein FlgE [Pseudomonas syringae pv. actinidiae str. M302091] Length = 586 Score = 90.7 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 57/134 (42%), Gaps = 3/134 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG- 62 SFN ++ A +RL +N++N+ TVGF++ + +FS + + + + Sbjct: 2 SFNTAISGINAANKRLEVAGNNIANSGTVGFKSSRAQFSALYSSAQLGSGRNAIGDGVRL 61 Query: 63 --KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + + S ++G LD ++G+ +F + + TR G F +V + G Sbjct: 62 AATQQNFNQGDSMTTSGNPLDMRIQGNGFFVVSDKGSLAYTRAGAFLKDAANFVVDSEGG 121 Query: 121 YPVLDMASVPIQIP 134 A+ +I Sbjct: 122 RLQGYAANDKGEIM 135 Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 35/99 (35%), Gaps = 5/99 (5%) Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLE 200 G + K I + L S +QG R ++ + + + + ++ G LE Sbjct: 486 GFTNGMNKSIGQVILASFANAQGLQARSDTRWTESAESGVADYEVPGVGTLGSLVGGALE 545 Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN E+ +I + + + I M I+ Sbjct: 546 GSNVVLADELIALIQAQTAYQANSKAISTEATVMQTLIQ 584 >gi|126697826|ref|YP_001086723.1| flagellar hook protein [Clostridium difficile 630] gi|115249263|emb|CAJ67076.1| Flagellar hook protein FlgE (Distal rod protein) [Clostridium difficile] Length = 327 Score = 90.7 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 37/87 (42%), Gaps = 1/87 (1%) Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIP-PTPLEDLSGVTVKRGFLEDSNANSMYEMGQ 212 I + +Y+ G + P+ P + T+ +G +E SN + E + Sbjct: 238 TIQKVQIYAFQNPAGLDAAGGNLFKPSANSGDPQIAGATGTIIQGAIEASNVDIAEEFTE 297 Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIR 239 MI ++ F + + +I +++ + E I Sbjct: 298 MIIASRSFQANSKIISTSDEILQEIIN 324 Score = 89.2 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 24/143 (16%), Positives = 49/143 (34%), Gaps = 17/143 (11%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M + G++ A + +L + +N++N T F+ + ++ Sbjct: 1 MIKAMYSGVSGMKANQTKLDVIGNNVANAGTTSFKKSSARITDSFYQTVLYASAPTAALG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 ++ Q G+ T D ++GD + + ++ TRDG F + Sbjct: 61 GTNLGQVGVGSKISSINKDMVQGNVQPTNRPSDLMIDGDGYLPVVRQGTVMYTRDGSFNL 120 Query: 109 T-----DDGSLVSASGKYPVLDM 126 DG+L + G V Sbjct: 121 DTGFKAADGALKNIKGGRLVNGD 143 >gi|228958033|ref|ZP_04119769.1| Flagellar hook protein FlgE [Bacillus thuringiensis serovar pakistani str. T13001] gi|228801658|gb|EEM48539.1| Flagellar hook protein FlgE [Bacillus thuringiensis serovar pakistani str. T13001] Length = 437 Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 31/181 (17%), Positives = 62/181 (34%), Gaps = 13/181 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49 M + + A + LS ++N++N TVG++ K F +++ Sbjct: 1 MIKALYTSITGMNAAQNALSVTSNNIANAQTVGYKKQKAIFDDLLYNNTVGSRGDGAYAG 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF--ALESPRGIILTRDGRFK 107 + + V GS T +++ A+EG+ F + + TR G F Sbjct: 61 TNPKSIGNGVKFSGTSTDFSDGSITLTSDKMETAIEGNGLFLVGDRNSGNVEYTRKGSFG 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 V+ D + + SG+Y + Q + S G + ++ + Sbjct: 121 VSKDNYVTNTSGQYVLGYGVKTGTQEIDFSSRPSPIHIPMGSAVGGIQTDKATIGGNLPR 180 Query: 168 G 168 Sbjct: 181 N 181 Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 18/144 (12%), Positives = 40/144 (27%), Gaps = 9/144 (6%) Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 G +S + + I + G + KV+ + + + Sbjct: 298 SDLTNYPTGKTISTTEVTGRPAAIANDYSISDGGFVMMRYSDGSM----KVVGQLAVATF 353 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 S G ++ N V+ E SN + E ++ + Sbjct: 354 PNSGGLMKTGNGNYIATPSAGIPGIGVAGENGAGNVRGSAKESSNVDLSVEFVDLMLYQR 413 Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242 F +I +++ + E + I Sbjct: 414 GFQGNAKVIKVSDEVLNEVVNLIR 437 >gi|30019797|ref|NP_831428.1| flagellar hook protein FlgE [Bacillus cereus ATCC 14579] gi|229043508|ref|ZP_04191218.1| Flagellar hook protein FlgE [Bacillus cereus AH676] gi|229127079|ref|ZP_04256078.1| Flagellar hook protein FlgE [Bacillus cereus BDRD-Cer4] gi|229149956|ref|ZP_04278184.1| Flagellar hook protein FlgE [Bacillus cereus m1550] gi|296502353|ref|YP_003664053.1| flagellar hook protein FlgE [Bacillus thuringiensis BMB171] gi|29895342|gb|AAP08629.1| Flagellar hook protein flgE [Bacillus cereus ATCC 14579] gi|228633637|gb|EEK90238.1| Flagellar hook protein FlgE [Bacillus cereus m1550] gi|228656432|gb|EEL12271.1| Flagellar hook protein FlgE [Bacillus cereus BDRD-Cer4] gi|228725886|gb|EEL77133.1| Flagellar hook protein FlgE [Bacillus cereus AH676] gi|296323405|gb|ADH06333.1| flagellar hook protein FlgE [Bacillus thuringiensis BMB171] Length = 437 Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 31/181 (17%), Positives = 62/181 (34%), Gaps = 13/181 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49 M + + A + LS ++N++N TVG++ K F +++ Sbjct: 1 MIKALYTSITGMNAAQNALSVTSNNIANAQTVGYKKQKAIFDDLLYNNTVGSRGDGAYAG 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF--ALESPRGIILTRDGRFK 107 + + V GS T +++ A+EG+ F + + TR G F Sbjct: 61 TNPKSIGNGVKFSGTSTDFSDGSITLTSDKMETAIEGNGLFLVGDRNSGNVEYTRKGSFG 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 V+ D + + SG+Y + Q + S G + ++ + Sbjct: 121 VSKDNYVTNTSGQYVLGYGVKTGTQEIDFSSRPSPIHIPMGSAVGGIQTDKATIGGNLPR 180 Query: 168 G 168 Sbjct: 181 N 181 Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 18/144 (12%), Positives = 40/144 (27%), Gaps = 9/144 (6%) Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 G +S + + I + G + KV+ + + + Sbjct: 298 SGLTNYPTGKTISTTEVTGRPAAIANDYSISDGGFVMMRYSDGSM----KVVGQLAVATF 353 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 S G ++ N V+ E SN + E ++ + Sbjct: 354 PNSGGLMKTGNGNYIATPSAGIPGIGVAGENGAGNVRGSAKESSNVDLSVEFVDLMLYQR 413 Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242 F +I +++ + E + I Sbjct: 414 GFQGNAKVIKVSDEVLNEVVNLIR 437 >gi|213026919|ref|ZP_03341366.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 149 Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 22/147 (14%), Positives = 49/147 (33%), Gaps = 6/147 (4%) Query: 99 ILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEISQKGKVIAT 157 TRDG F+V +G LV+A G + + V + + Sbjct: 2 AYTRDGSFQVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQAAPVQVGQ 61 Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQ 212 + L + G + + + + +G++E SN N E+ Sbjct: 62 LNLTTFMNDTGLESIGENLYIETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVN 121 Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIR 239 MI + + + + + ++ + + + Sbjct: 122 MIQVQRAYEINSKAVSTTDQMLQKLTQ 148 >gi|285018209|ref|YP_003375920.1| flagellar hook protein flge [Xanthomonas albilineans GPE PC73] gi|283473427|emb|CBA15932.1| probable flagellar hook protein flge [Xanthomonas albilineans] Length = 407 Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 65/166 (39%), Gaps = 2/166 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVAS 61 FN L+ A L+ A+N++N +T GF++ + +F++ + + S V Sbjct: 2 GFNTSLSGIKAANTDLNVTANNIANVNTTGFKSSRAEFADQFTVSGYGLARNAVGSGVRV 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 G+ TG LD A+ G +F L + + +R G F+ +G +V+ G Sbjct: 62 SNVAQQFSQGNIDPTGRNLDLAISGSGFFTLSNNGARVYSRAGNFQTDANGYVVNPQGAR 121 Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 + + + ++ + S ++++ + Sbjct: 122 LQVFPPTANGNGFAVGTLSDLQLQTTDSPPNPTSTVNLMFTLPGNA 167 Score = 75.3 bits (183), Expect = 7e-12, Method: Composition-based stats. Identities = 13/98 (13%), Positives = 33/98 (33%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLED 201 + K + + + + QG ++ + + +V+ G LE Sbjct: 308 YSNNADKALGQVAMSNFVNPQGLTSLGDNAWAESSGSGAPRTGVAGSSDFGSVQSGALES 367 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S + ++ MI + F + + +I ++ I Sbjct: 368 STVDLTEQLVNMIVAQRNFQANSQMISTQDQVTQTVIN 405 >gi|49480337|ref|YP_035873.1| flagellar hook protein FlgE [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49331893|gb|AAT62539.1| flagellar hook protein [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 437 Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 61/181 (33%), Gaps = 13/181 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49 M + + A + LS ++N++N TVG++ K F +++ Sbjct: 1 MIKALYTSITGMNAAQNALSVTSNNIANAQTVGYKKQKAIFDDLLYNNTVGSRGDGAYAG 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF--ALESPRGIILTRDGRFK 107 + + V GS T +++ A+EG+ F + + TR G F Sbjct: 61 TNPKSIGNGVKFSGTSTDFSDGSITLTSDKMETAIEGNGLFLVGDRNAGNVEYTRKGSFS 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 V+ D + + G+Y + Q + S G + ++ + Sbjct: 121 VSKDSYVTNTGGQYVLGYGVKTGTQEVDFSSRPSPIHIPMGSAVGGIQTDKATIGGNLPR 180 Query: 168 G 168 Sbjct: 181 N 181 Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats. Identities = 18/144 (12%), Positives = 40/144 (27%), Gaps = 9/144 (6%) Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 G +S + + I + G + KV+ + + + Sbjct: 298 SGLTNYPTGKTLSTTEVTGRPAAIANDYSISDGGFVMMKYSDGSM----KVVGQLAVATF 353 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 S G ++ N V+ E SN + E ++ + Sbjct: 354 PNSGGLMKTGNGNYVATPSAGIPGIGVAGENGAGNVRGSAKESSNVDLSVEFVDLMLYQR 413 Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242 F +I +++ + E + I Sbjct: 414 GFQGNAKVIKVSDEVLNEVVNLIR 437 >gi|3286760|emb|CAA05173.1| flagellar hook subunit protein [Campylobacter jejuni] Length = 862 Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 35/183 (19%), Positives = 59/183 (32%), Gaps = 14/183 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G+ A + + +N+SN +T GF+ + F + Sbjct: 1 MMRSLWSGVRRLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATTPTDGRG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRF 106 + Q V+ GS +T + D A+ GD +F + LTRDG F Sbjct: 61 GQNPLQIGLGVSVSSTTRIHSQGSVQTTNSNTDVAINGDGFFMVSDDGGLTNYLTRDGAF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 K+ G+ V+ SG + Q +T +++ Sbjct: 121 KLDAYGNFVNNSGFIVQGWNINWDDQTIDSSRSPQNIFIDPGMHIPAAKSTEVAIKANLN 180 Query: 167 QGF 169 G Sbjct: 181 SGL 183 Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 17/144 (11%), Positives = 46/144 (31%), Gaps = 5/144 (3%) Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 T + S + +G+ + + + + K +A + + Sbjct: 716 TSGSNDGLVSSNSASTLTGQATDGYSSGNLKPDAIRVDEKGNLLGEFTNGKTFRVAKIAM 775 Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIH 215 SV + G + + T +K LE SN + + ++I Sbjct: 776 ASVANNSGLEEIGGNLFKVTANSGNIVVGEAGTGGRGEMKTSALEMSNVDLSRALTELII 835 Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239 + + + + + I +++ + I+ Sbjct: 836 IQRGYQANSKTISTSDQMLQTLIQ 859 >gi|229029434|ref|ZP_04185517.1| Flagellar hook protein flgE [Bacillus cereus AH1271] gi|228731893|gb|EEL82792.1| Flagellar hook protein flgE [Bacillus cereus AH1271] Length = 409 Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 30/197 (15%), Positives = 65/197 (32%), Gaps = 13/197 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49 M + + A + LS ++N++N TVG++ K F +++ Sbjct: 1 MIKALYTSITGMNATQNALSVTSNNIANAQTVGYKKQKAMFDDLLYNNSIGSKGDNKYAG 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107 + + V G+ TG + A+EG+ +F + + TR G F Sbjct: 61 TNPKSIGNGVKMSGTVTDYSDGTITLTGGKTQAAMEGNGFFVVGDSAGGNMEFTRKGTFG 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 ++ + + + G+Y A+ I + + G + T G ++ Sbjct: 121 ISSNYYITNTEGQYVFAYPANAATGEVDLSGIPGPLQIPMGTAIGGIQTTKGTIKGNIPV 180 Query: 168 GFVRRENSGISPNIPPT 184 + + Sbjct: 181 NESKITQDLPFYDDAGN 197 Score = 65.3 bits (157), Expect = 7e-09, Method: Composition-based stats. Identities = 12/93 (12%), Positives = 30/93 (32%), Gaps = 5/93 (5%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYE 209 + + G ++ N + L + V+ G E +N + E Sbjct: 317 AGQLAVAMFPNEGGLMKTGNGNYTATNTTGILALGASGQNGAGKVRGGAQEGANVDLSVE 376 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 ++ + F +I +++ + E + I Sbjct: 377 FVDLMLYQRGFQGNAKVIKVSDEVLNEVVNLIR 409 >gi|187935288|ref|YP_001885050.1| flagellar hook protein FlgE [Clostridium botulinum B str. Eklund 17B] gi|187723441|gb|ACD24662.1| flagellar hook protein FlgE [Clostridium botulinum B str. Eklund 17B] Length = 364 Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 59/161 (36%), Gaps = 37/161 (22%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G++ + + +L + +N++N T GF++ +F++++ Sbjct: 1 MLRSMYSGISGMKSNQVKLDVIGNNIANVSTTGFKSSSARFTDMLYQNVSSATAPTSTKG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP------------- 95 + Q G+ +STG LD ++GD + + + Sbjct: 61 GTNAKQVGLGSQLASINKVMGQGNALSTGRSLDVCIDGDGYLIVGTGPASYGGDDGTKGG 120 Query: 96 ------------RGIILTRDGRFKVTDDGSLVSASGKYPVL 124 I+ TRDG + +G+L++A G + Sbjct: 121 TSIVNGSINGGDMDILYTRDGNLTLDHEGNLLTADGYRVMG 161 Score = 76.1 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 13/96 (13%), Positives = 30/96 (31%), Gaps = 12/96 (12%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTP------------LEDLSGVTVKRGFLEDS 202 + + + S +G + + + P +G LE S Sbjct: 265 LGQVAMGSFKNPEGLTSVGGNLLEASSNSGPVIVKTSTGTTDGDNSKGFGDFIQGALEAS 324 Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 N + + MI T+ F + + +I ++ + Sbjct: 325 NVDLTEQFTDMITATRAFQASSKMISTADEILQTIT 360 >gi|326319097|ref|YP_004236769.1| fagellar hook-basal body protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375933|gb|ADX48202.1| fagellar hook-basal body protein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 425 Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 44/188 (23%), Positives = 71/188 (37%), Gaps = 6/188 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN--DIDQKISFVAS 61 SF GL+ A + L + N++N+ TVGF+ + +F+E+V V Sbjct: 2 SFQQGLSGLNAASKNLDVIGHNVANSGTVGFKASRAEFAEMVANAIGSAGGTNAGIGVEL 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLVSASGK 120 G+ TG LD A+ GD +F L+ P G TR G FK+ +G LV+ + Sbjct: 62 SAVAQQFNQGNISVTGNSLDVAINGDGFFTLQQPDGSRAYTRAGNFKLDSNGQLVTNTKA 121 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 + I K N + K + + + + +G + Sbjct: 122 QVMGYALDP---ITGKRTASNAAPLSFPTSKPIPAKQTTAITAEFNLDARAPDAAGDATA 178 Query: 181 IPPTPLED 188 PP P Sbjct: 179 TPPVPATP 186 Score = 79.5 bits (194), Expect = 4e-13, Method: Composition-based stats. Identities = 14/89 (15%), Positives = 30/89 (33%), Gaps = 5/89 (5%) Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEM 210 + L S +QG ++ + ++ G LEDSN + E+ Sbjct: 335 GQVALASFRNTQGLASVGSNNWVETFESGQPVLGTPTEGKFGGLRSGALEDSNVDLTAEL 394 Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIR 239 M+ + + + I ++ M + Sbjct: 395 VNMMTAQRAYQANAQTIKTQDQVMSTLVN 423 >gi|251780251|ref|ZP_04823171.1| flagellar hook protein FlgE [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243084566|gb|EES50456.1| flagellar hook protein FlgE [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 366 Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 58/168 (34%), Gaps = 44/168 (26%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ + +L + +N++N T GF++ +FS+++ ++ Sbjct: 1 MLRSMYSGISGMKTNQVKLDVIGNNIANVSTTGFKSSSARFSDMLYQNASEATAPTSTKG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--------- 99 Q G+ +STG LD ++GD + + + Sbjct: 61 GTNAKQVGLGSQLSSINKVMGQGNALSTGRSLDVCVDGDGYIMVSKGPEVYAADKTGTGA 120 Query: 100 -----------------------LTRDGRFKVTDDGSLVSASGKYPVL 124 TRDG F + +G+L++A G + Sbjct: 121 DAKNTIGISTSGKLTGGGENEILYTRDGNFTLDHEGNLLTADGYRVMG 168 Score = 76.8 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 12/99 (12%), Positives = 30/99 (30%), Gaps = 15/99 (15%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPL---------------EDLSGVTVKRGFL 199 + + + + +G + + + P +G L Sbjct: 264 LGQVAMATFKNPEGLTSIGGNLLQTSPNSGPEIIKTPVGKLATDFTDNSKGFGEFVQGAL 323 Query: 200 EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 E SN + + MI T+ F + + +I ++ + Sbjct: 324 ESSNVDLTEQFTDMITATRAFQASSKMITTGDEILQTIT 362 >gi|228952133|ref|ZP_04114228.1| Flagellar hook protein FlgE [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228807665|gb|EEM54189.1| Flagellar hook protein FlgE [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 437 Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 31/181 (17%), Positives = 62/181 (34%), Gaps = 13/181 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49 M + + A + LS ++N++N TVG++ K F +++ Sbjct: 1 MIKALYTSITGMNAAQNALSVTSNNIANAQTVGYKKQKAIFDDLLYNNTVGSRGDGAYAG 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF--ALESPRGIILTRDGRFK 107 + + V GS T +++ A+EG+ F + + TR G F Sbjct: 61 TNPKSIGNGVKFSGTSTDFSDGSLTLTSDKMETAIEGNGLFLVGDRNSGNVEYTRKGSFG 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 V+ D + + SG+Y + Q + S G + ++ + Sbjct: 121 VSKDNYVTNTSGQYVLGYGVKTGTQEIDFSSRPSPIHIPMGSAVGGIQTDKATIGGNLPR 180 Query: 168 G 168 Sbjct: 181 N 181 Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 18/144 (12%), Positives = 40/144 (27%), Gaps = 9/144 (6%) Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 G +S + + I + G + KV+ + + + Sbjct: 298 SGLTNYPTGKTISTTEVTGRPAAIANDYSISDGGFVMMTYSDGSM----KVVGQLAVATF 353 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 S G ++ N V+ E SN + E ++ + Sbjct: 354 PNSGGLMKTGNGNYIATPSAGIPGIGVAGENGAGNVRGSAKESSNVDLSAEFVDLMLYQR 413 Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242 F +I +++ + E + I Sbjct: 414 GFQGNAKVIKVSDEVLNEVVNLIR 437 >gi|254973919|ref|ZP_05270391.1| flagellar hook protein [Clostridium difficile QCD-66c26] gi|255091306|ref|ZP_05320784.1| flagellar hook protein [Clostridium difficile CIP 107932] gi|255312963|ref|ZP_05354546.1| flagellar hook protein [Clostridium difficile QCD-76w55] gi|255515722|ref|ZP_05383398.1| flagellar hook protein [Clostridium difficile QCD-97b34] gi|255648816|ref|ZP_05395718.1| flagellar hook protein [Clostridium difficile QCD-37x79] gi|260682035|ref|YP_003213320.1| flagellar hook protein [Clostridium difficile CD196] gi|260685633|ref|YP_003216766.1| flagellar hook protein [Clostridium difficile R20291] gi|306518931|ref|ZP_07405278.1| flagellar hook protein [Clostridium difficile QCD-32g58] gi|260208198|emb|CBA60542.1| flagellar hook protein [Clostridium difficile CD196] gi|260211649|emb|CBE01907.1| flagellar hook protein [Clostridium difficile R20291] Length = 327 Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 35/87 (40%), Gaps = 1/87 (1%) Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIP-PTPLEDLSGVTVKRGFLEDSNANSMYEMGQ 212 I + Y+ G + P+ P + + +G +E SN + E + Sbjct: 238 TIQKVQTYAFQNPAGLDAEGGNLFKPSANSGDPQIAGATGNIIQGAIEASNVDIAEEFTE 297 Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIR 239 MI ++ F + + +I +++ + E I Sbjct: 298 MIIASRSFQANSKIISTSDEILQEIIN 324 Score = 89.5 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 24/150 (16%), Positives = 51/150 (34%), Gaps = 17/150 (11%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M + G++ A + +L + +N++N T F+ + ++ Sbjct: 1 MIKAMYSGVSGMKANQTKLDVIGNNVANAGTTSFKKSSARITDSFYQTVLYASAPTAALG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 ++ Q G+ T D ++GD + + ++ TRDG F + Sbjct: 61 GTNLGQVGVGSKISSINKDMTQGNVQPTNRPSDLMIDGDGYLPVVRQGTVMYTRDGSFNL 120 Query: 109 T-----DDGSLVSASGKYPVLDMASVPIQI 133 DG+L + G V + + Sbjct: 121 DTGFKAADGALKNIKGGRLVNGDGYMLQGV 150 >gi|89902477|ref|YP_524948.1| hypothetical protein Rfer_3717 [Rhodoferax ferrireducens T118] gi|89347214|gb|ABD71417.1| protein of unknown function DUF1078-like [Rhodoferax ferrireducens T118] Length = 404 Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 3/126 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV--GAIKNDIDQKISFVAS 61 SF GL+ A + L + +N++N +T G ++ + +F ++V VA Sbjct: 2 SFQTGLSGLNASSRSLDVIGNNIANANTTGMKSSRAEFGDLVASSLGAGGSSGAGIGVAV 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGK 120 G G+ TG +LD A+ G +F L P G TRDG FK+ +G + + SG Sbjct: 62 GSISQQFSQGNINITGNDLDVAINGGGFFQLALPDGSAAYTRDGSFKLDANGYIKTNSGA 121 Query: 121 YPVLDM 126 + Sbjct: 122 NVLGYP 127 Score = 80.7 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 13/98 (13%), Positives = 32/98 (32%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGI-SPNIPPTP----LEDLSGVTVKRGFLED 201 + + ++ + L QG + + P ++ G LE+ Sbjct: 305 YSNGQTQIAGQLSLADFRNVQGLSPIGGNSWVASYTSGDPVLGSPGVGKFGALRSGALEE 364 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ M+ + + + I ++ M + Sbjct: 365 SNVDLTAELVNMMTAQRAYQANAQTIKTQDQVMSTLVN 402 >gi|242278416|ref|YP_002990545.1| hypothetical protein Desal_0941 [Desulfovibrio salexigens DSM 2638] gi|242121310|gb|ACS79006.1| protein of unknown function DUF1078 domain protein [Desulfovibrio salexigens DSM 2638] Length = 513 Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 34/191 (17%), Positives = 64/191 (33%), Gaps = 5/191 (2%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA---IKNDIDQKISFV 59 +S G++ S V++N++N+ TVGF++ F +V + + Q + Sbjct: 5 SSLYTGISGLYVNSFATSVVSNNLANSSTVGFKSSDAIFEDVFYSTLTTGGGLAQVGNGA 64 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR--GIILTRDGRFKVTDDGSLVSA 117 G++ ++ + A+ GD ++ + P TR G F DG LV A Sbjct: 65 GVSTINTDYSQGTYQNSSISTNVAINGDGYYMVVDPDTSTTYYTRAGNFDFDKDGFLVDA 124 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177 G I + ++ TM L S + + + + Sbjct: 125 YGNQVQGWEMENGSASGSLTTIQLDQSQSPPKATSEIALTMNLDSQSVDEAITANPYTSL 184 Query: 178 SPNIPPTPLED 188 T Sbjct: 185 FELYDGTQNPP 195 Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats. Identities = 25/198 (12%), Positives = 58/198 (29%), Gaps = 7/198 (3%) Query: 47 AIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106 A N S +S + ++ ++G A A + P T + Sbjct: 315 ANLNFTGSAEGQNVSFNFGMSSDNATWDTSGGITSLADITAATDYSDLPSFSDYTLETGA 374 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 + S S++ D + + + + + + + +GL S Sbjct: 375 TTSYSDS--SSATYDIAQDGYPTGSLVSVEVDENGILIGNYTNSQSIELFQLGLASFTNE 432 Query: 167 QGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221 G + +V LE SN + +M ++I + + Sbjct: 433 SGLKAEGGTLFRATTDSGEAIIGTAGSSGFGSVVSNALEGSNVDLASQMTELIIIQSSYQ 492 Query: 222 SITTLIDENEKSMLEAIR 239 + + ++ + + AI Sbjct: 493 ANSKVVTTADTLLQTAIS 510 >gi|294084418|ref|YP_003551176.1| hypothetical protein SAR116_0849 [Candidatus Puniceispirillum marinum IMCC1322] gi|292663991|gb|ADE39092.1| hypothetical protein SAR116_0849 [Candidatus Puniceispirillum marinum IMCC1322] Length = 1575 Score = 89.9 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 37/195 (18%), Positives = 73/195 (37%), Gaps = 5/195 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG--AIKNDIDQKISFVAS 61 SF L +S ++N++N T GF+ +V+F ++ ++N S Sbjct: 2 SFYTALTGLNGSSADISATSNNIANVGTTGFKRSRVEFGDIFATSPLQNSSSSLGSGAIL 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALES---PRGIILTRDGRFKVTDDGSLVSAS 118 G+ S+ LD A+ G +FAL+ + TR+G V +D +V ++ Sbjct: 62 KGVKQQFTQGNIASSLNALDLAISGQGFFALKPSLTSAQTVYTRNGSLNVDNDRYVVDSA 121 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178 G+Y + + + KD V + ++ + V++ + Sbjct: 122 GQYLLTYPVNNDGSVTAKDLQSAVPLQLPVTSGDPQATSNINLGVNVPASSEVVTDQAQF 181 Query: 179 PNIPPTPLEDLSGVT 193 + +D S T Sbjct: 182 ADGYTFNPDDASTFT 196 Score = 76.1 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 12/123 (9%), Positives = 33/123 (26%), Gaps = 5/123 (4%) Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 D + + + + + + + + + + G + N+ Sbjct: 1450 VQQDGFTSGRLDGLEIDSSGTIRANYTNGQNNPLGKIVVANFNNQNGLKQIGNATYVETA 1509 Query: 182 PPTPLEDLS-----GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + + G LE SN + E+ +I + + + I+ Sbjct: 1510 VSGTPQVGEAGAEGFGNILSGSLERSNVDITEELVNLITAQRNYQASAKAIETTTGLTQT 1569 Query: 237 AIR 239 I Sbjct: 1570 IIN 1572 >gi|320325094|gb|EFW81163.1| flagellar hook protein FlgE [Pseudomonas syringae pv. glycinea str. B076] Length = 586 Score = 89.9 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 27/133 (20%), Positives = 56/133 (42%), Gaps = 3/133 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SFN ++ A +RL +N++N+ T+GF++ + +FS + A + + Sbjct: 2 SFNTAISGIHAANKRLEVAGNNIANSGTIGFKSSRAQFSALYSASQLGSGRNAVGDGVRL 61 Query: 64 EYLSKEVGS---FISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + + ++G LD ++G+ +F + + TR G F +V + G Sbjct: 62 ASMQQNFNQGESMTTSGNPLDMRIQGNGFFVVSDGGSLAYTRAGAFLKDAANFVVDSEGG 121 Query: 121 YPVLDMASVPIQI 133 A+ +I Sbjct: 122 RLQGYAANEQGEI 134 Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 17/99 (17%), Positives = 33/99 (33%), Gaps = 5/99 (5%) Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLE 200 G + K I + L S QG R ++ + + + + ++ LE Sbjct: 486 GFANGMNKNIGQVILASFANPQGLQARSDTCWTESADSGVADYDVPGVGTLGSLIGDGLE 545 Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN E+ +I + + + I M I+ Sbjct: 546 GSNVVLADELIALIQAQTAYQANSKAISTEATVMQTLIQ 584 >gi|229069305|ref|ZP_04202595.1| Flagellar hook protein flgE [Bacillus cereus F65185] gi|229078936|ref|ZP_04211488.1| Flagellar hook protein flgE [Bacillus cereus Rock4-2] gi|228704350|gb|EEL56784.1| Flagellar hook protein flgE [Bacillus cereus Rock4-2] gi|228713792|gb|EEL65677.1| Flagellar hook protein flgE [Bacillus cereus F65185] Length = 407 Score = 89.9 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 31/197 (15%), Positives = 65/197 (32%), Gaps = 13/197 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49 M + + A + LS ++N++N TVG++ K F +++ Sbjct: 1 MIKALYTSITGMNATQNALSVTSNNIANAQTVGYKKQKAMFDDLLYNNSIGAKGDGKYAG 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107 + + V G+ TG + A+EG+ +F + TR G F Sbjct: 61 TNPKSIGNGVKMSGTVTDYSDGTITLTGGKTQAAMEGNGFFVVGDSKGGNMEFTRKGTFG 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 ++ D + + G+Y A+ I + + G + + G ++ Sbjct: 121 ISSDYYITNTEGQYVFAYPANEATGEVDLSGIPGPLQIPMGTAIGGIRTSKGTIKGNIPT 180 Query: 168 GFVRRENSGISPNIPPT 184 G + + Sbjct: 181 GEKQITQDLPVYDNAGN 197 Score = 65.7 bits (158), Expect = 6e-09, Method: Composition-based stats. Identities = 12/93 (12%), Positives = 29/93 (31%), Gaps = 5/93 (5%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYE 209 + + G ++ N + L V+ G E +N + E Sbjct: 315 AGQLAVAMFPNEGGLMKTGNGNYTATNTTGILALGTSGQNGAGKVRGGAQEGANVDLSVE 374 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 ++ + F +I +++ + E + I Sbjct: 375 FVDLMLYQRGFQGNAKVIKVSDEVLNEVVNLIR 407 >gi|70731823|ref|YP_261565.1| flagellar hook protein FlgE [Pseudomonas fluorescens Pf-5] gi|68346122|gb|AAY93728.1| flagellar hook protein FlgE [Pseudomonas fluorescens Pf-5] Length = 447 Score = 89.9 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 33/118 (27%), Positives = 57/118 (48%), Gaps = 2/118 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--ISFVAS 61 SFNIGL+ A ++L +N++N T GF++ + +F++V A K + + V Sbjct: 2 SFNIGLSGLYAANKQLDVTGNNIANVATTGFKSSRAEFADVYSATKLGSGTQVIGNGVRL 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119 G +TG LD ++G +F L + + TR G FK +G + ++ G Sbjct: 62 ANVSQQFTNGDINNTGNVLDMGIQGQGFFVLSTNGSLTYTRAGTFKTDKEGYITNSDG 119 Score = 67.6 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 31/98 (31%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLED 201 +++ K I + L S QG + + + ++ LE+ Sbjct: 348 FSNEQTKPIGQISLASFTNEQGLQPVGGTQWKETYSSGIPGYDAPKTGTLGAIQSNSLEE 407 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN N E+ +I + + I M I+ Sbjct: 408 SNVNLTNELVNLIKAQSNYQANAKTISTQSTIMQTIIQ 445 >gi|291528559|emb|CBK94145.1| fagellar hook-basal body proteins [Eubacterium rectale M104/1] Length = 247 Score = 89.9 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 49/209 (23%), Positives = 89/209 (42%), Gaps = 14/209 (6%) Query: 46 GAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-----PRGIIL 100 + ++ V G+ Y + GSF T D A+ G +FA+ + Sbjct: 39 YGLHKNLGSMTYGVHLGETYTDWDEGSFKVTDNPTDLAIGGKGFFAVAFTDKSGQTSVKY 98 Query: 101 TRDGRFKVTDDGSLVSASGKYP-------VLDMASVPIQIPQKDEIFNVGEKGEISQKGK 153 TRDG FKV DG LV+A G + D +E F+V G I+Q + Sbjct: 99 TRDGAFKVNADGYLVTADGDHVLNATGALSGDGGEANWVKVDPNEKFSVNSLGYITQNNQ 158 Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQM 213 ++ T+G+ VD + + + + + +++G LE SN N + EM M Sbjct: 159 LVGTIGVVDVDNYDYIEKYGENLYNLTAGGNIIASDAE--IEQGALETSNVNVVNEMVNM 216 Query: 214 IHLTQKFNSITTLIDENEKSMLEAIRNIA 242 I + + + + +I ++++ +A+ N+ Sbjct: 217 ITIQRAYEAGQKVITSIDETLDKAVNNVG 245 >gi|257484948|ref|ZP_05638989.1| flagellar basal-body protein, putative [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331011043|gb|EGH91099.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 586 Score = 89.9 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 27/133 (20%), Positives = 56/133 (42%), Gaps = 3/133 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SFN ++ A +RL +N++N+ T+GF++ + +FS + A + + Sbjct: 2 SFNTAISGIHAANKRLEVAGNNIANSGTIGFKSSRAQFSALYSASQLGSGRNAVGDGVRL 61 Query: 64 EYLSKEVGS---FISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + + ++G LD ++G+ +F + + TR G F +V + G Sbjct: 62 ASMQQNFNQGESMTTSGNPLDMRIQGNGFFVVSDGGSLAYTRAGAFLKDAANFVVDSEGG 121 Query: 121 YPVLDMASVPIQI 133 A+ +I Sbjct: 122 RLQGYAANEQGEI 134 Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 17/99 (17%), Positives = 33/99 (33%), Gaps = 5/99 (5%) Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLE 200 G + K I + L S QG R ++ + + + + ++ LE Sbjct: 486 GFTNGMNKNIGQVILASFANPQGLQARSDTRWTESADSGVADYDVPGVGTLGSLIGDGLE 545 Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN E+ +I + + + I M I+ Sbjct: 546 GSNVVLADELIALIQAQTAYQANSKAISTEATVMQTLIQ 584 >gi|218235227|ref|YP_002366439.1| flagellar hook protein FlgE [Bacillus cereus B4264] gi|228907387|ref|ZP_04071245.1| Flagellar hook protein flgE [Bacillus thuringiensis IBL 200] gi|228938867|ref|ZP_04101467.1| Flagellar hook protein flgE [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228964737|ref|ZP_04125844.1| Flagellar hook protein flgE [Bacillus thuringiensis serovar sotto str. T04001] gi|228971748|ref|ZP_04132369.1| Flagellar hook protein flgE [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228978357|ref|ZP_04138734.1| Flagellar hook protein flgE [Bacillus thuringiensis Bt407] gi|218163184|gb|ACK63176.1| flagellar hook protein [Bacillus cereus B4264] gi|228781374|gb|EEM29575.1| Flagellar hook protein flgE [Bacillus thuringiensis Bt407] gi|228787838|gb|EEM35796.1| Flagellar hook protein flgE [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228794987|gb|EEM42486.1| Flagellar hook protein flgE [Bacillus thuringiensis serovar sotto str. T04001] gi|228820716|gb|EEM66741.1| Flagellar hook protein flgE [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228852248|gb|EEM97044.1| Flagellar hook protein flgE [Bacillus thuringiensis IBL 200] gi|326939367|gb|AEA15263.1| flagellar hook protein FlgE [Bacillus thuringiensis serovar chinensis CT-43] Length = 407 Score = 89.9 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 31/197 (15%), Positives = 65/197 (32%), Gaps = 13/197 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49 M + + A + LS ++N++N TVG++ K F +++ Sbjct: 1 MIKALYTSITGMNATQNALSVTSNNIANAQTVGYKKQKAMFDDLLYNNSIGAKGDGKYAG 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107 + + V G+ TG + A+EG+ +F + TR G F Sbjct: 61 TNPKSIGNGVKMSGTVTDYSDGTITLTGGKTQAAMEGNGFFVVGDSKGGNMEFTRKGTFG 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 ++ D + + G+Y A+ I + + G + + G ++ Sbjct: 121 ISSDYYITNTEGQYVFAYPANEATGEVDLSGIPGPLQIPMGTAIGGIRTSKGTIKGNIPT 180 Query: 168 GFVRRENSGISPNIPPT 184 G + + Sbjct: 181 GEKQITQDLPVYDNAGN 197 Score = 65.7 bits (158), Expect = 6e-09, Method: Composition-based stats. Identities = 12/93 (12%), Positives = 30/93 (32%), Gaps = 5/93 (5%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYE 209 + + G ++ N + L + V+ G E +N + E Sbjct: 315 AGQLAVAMFPNEGGLMKTGNGNYTATNTTGILALGASGQNGAGKVRGGAQEGANVDLSVE 374 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 ++ + F +I +++ + E + I Sbjct: 375 FVDLMLYQRGFQGNAKVIKVSDEVLNEVVNLIR 407 >gi|206970889|ref|ZP_03231841.1| flagellar hook protein FlgE [Bacillus cereus AH1134] gi|228920464|ref|ZP_04083809.1| Flagellar hook protein flgE [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|229178162|ref|ZP_04305533.1| Flagellar hook protein flgE [Bacillus cereus 172560W] gi|206734525|gb|EDZ51695.1| flagellar hook protein FlgE [Bacillus cereus AH1134] gi|228605292|gb|EEK62742.1| Flagellar hook protein flgE [Bacillus cereus 172560W] gi|228839094|gb|EEM84390.1| Flagellar hook protein flgE [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 407 Score = 89.9 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 31/197 (15%), Positives = 65/197 (32%), Gaps = 13/197 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49 M + + A + LS ++N++N TVG++ K F +++ Sbjct: 1 MIKALYTSITGMNATQNALSVTSNNIANAQTVGYKKQKAMFDDLLYNNSIGAKGDGKYAG 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107 + + V G+ TG + A+EG+ +F + TR G F Sbjct: 61 TNPKSIGNGVKMSGTVTDYSDGTITLTGGKTQAAMEGNGFFVVGDSKGGNMEFTRKGTFG 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 ++ D + + G+Y A+ I + + G + + G ++ Sbjct: 121 ISSDYYITNTEGQYVFAYPANEATGEVDLSGIPGPLQIPMGTAIGGIRTSKGTIKGNIPT 180 Query: 168 GFVRRENSGISPNIPPT 184 G + + Sbjct: 181 GEKQITQDLPVYDNAGN 197 Score = 65.3 bits (157), Expect = 6e-09, Method: Composition-based stats. Identities = 12/93 (12%), Positives = 29/93 (31%), Gaps = 5/93 (5%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYE 209 + + G ++ N + L V+ G E +N + E Sbjct: 315 AGQLAVAMFPNEGGLMKTGNGNYTATNTTGILALGTSGQNGAGKVRGGAQEGANVDLSVE 374 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 ++ + F +I +++ + E + I Sbjct: 375 FVDLMLYQRGFQGNAKVIKVSDEVLNEVVNLIR 407 >gi|167034944|ref|YP_001670175.1| flagellar hook protein FlgE [Pseudomonas putida GB-1] gi|166861432|gb|ABY99839.1| flagellar basal body FlaE domain protein [Pseudomonas putida GB-1] Length = 440 Score = 89.9 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 36/136 (26%), Positives = 60/136 (44%), Gaps = 4/136 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI----DQKISFV 59 SFNIGL+ A + L+ +N++N T GF++ + +F++ + + V Sbjct: 2 SFNIGLSGLYAANKALNVTGNNIANVATTGFKSSRAEFADQYSNSIRGTSAGKNTVGTGV 61 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119 + G+ TG LD A++G+ +F + I TR G F DG +V+ASG Sbjct: 62 KTAAVSQLFTPGNINGTGQALDMAIDGNGFFVMSDNGSKIYTRAGAFYSDKDGYVVNASG 121 Query: 120 KYPVLDMASVPIQIPQ 135 +I Q Sbjct: 122 SKLQGYAVDANGKITQ 137 Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 16/103 (15%), Positives = 32/103 (31%), Gaps = 5/103 (4%) Query: 142 VGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKR 196 + + KVI + + + QG + + + + + Sbjct: 336 NMFANFTNGQDKVIGQVAIANFANLQGLTPIGGTNWKESYASGVPVIGAPDTGTLGQITG 395 Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G LEDSN + E+ +I + + I M I+ Sbjct: 396 GALEDSNVDLTGELVNLIKAQSNYQANAKTISTESTIMQTIIQ 438 >gi|182418417|ref|ZP_02949711.1| flagellar basal-body rod protein FlgG [Clostridium butyricum 5521] gi|237666503|ref|ZP_04526488.1| flagellar basal-body rod protein FlgG (Distal rod protein) [Clostridium butyricum E4 str. BoNT E BL5262] gi|182377799|gb|EDT75343.1| flagellar basal-body rod protein FlgG [Clostridium butyricum 5521] gi|237657702|gb|EEP55257.1| flagellar basal-body rod protein FlgG [Clostridium butyricum E4 str. BoNT E BL5262] Length = 379 Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 61/166 (36%), Gaps = 34/166 (20%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50 M G++ +Q+L + +N++N T F++ + +FS+++ Sbjct: 1 MLRCMYSGISGMKVNQQKLDVIGNNIANVGTTAFKSSRAEFSDMLYQNAGVATSPTSNKG 60 Query: 51 --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL---------------- 92 + Q G+ +STG LD ++G+ +F + Sbjct: 61 GTNAKQVGLGAKLASIDRVMSQGNALSTGRTLDACVDGEGYFIVGNGLVDYTGAGTTVTK 120 Query: 93 ------ESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQ 132 + I TRDG F++ +G+LV++ G + + Sbjct: 121 DGKLIGGNGMAINYTRDGNFQLDYEGNLVTSDGYRIMGYPLTATQP 166 Score = 69.1 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 11/63 (17%), Positives = 22/63 (34%) Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 T + +G LE SN + + MI T+ F + + +I ++ + Sbjct: 313 ADGTADTTTFDNSKGFGDIIQGCLEASNVDLTEQFTDMITATRSFQASSKMITTGDEILQ 372 Query: 236 EAI 238 Sbjct: 373 TIT 375 >gi|330986469|gb|EGH84572.1| flagellar hook protein FlgE [Pseudomonas syringae pv. lachrymans str. M301315] Length = 586 Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 27/133 (20%), Positives = 56/133 (42%), Gaps = 3/133 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SFN ++ A +RL +N++N+ T+GF++ + +FS + A + + Sbjct: 2 SFNTAISGIHAANKRLEVAGNNIANSGTIGFKSSRAQFSALYSASQLGSGRNAVGDGVRL 61 Query: 64 EYLSKEVGS---FISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + + ++G LD ++G+ +F + + TR G F +V + G Sbjct: 62 ASMQQNFNQGESMTTSGNPLDMRIQGNGFFVVSDGGSLAYTRAGAFLKDAANFVVDSEGG 121 Query: 121 YPVLDMASVPIQI 133 A+ +I Sbjct: 122 RLQGYAANAQGEI 134 Score = 66.0 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 17/99 (17%), Positives = 33/99 (33%), Gaps = 5/99 (5%) Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLE 200 G + K I + L S QG R ++ + + + + ++ LE Sbjct: 486 GFTNGMNKNIGQVILASFANPQGLQARSDTRWTESADSGVADYDVPGVGTLGSLIGDGLE 545 Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN E+ +I + + + I M I+ Sbjct: 546 GSNVVLADELIALIQAQTAYQANSKAISTEATVMQTLIQ 584 >gi|87119676|ref|ZP_01075573.1| hypothetical protein MED121_07045 [Marinomonas sp. MED121] gi|86165152|gb|EAQ66420.1| hypothetical protein MED121_07045 [Marinomonas sp. MED121] Length = 565 Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 38/166 (22%), Positives = 63/166 (37%), Gaps = 3/166 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI---KNDIDQKISFVA 60 FN L+ A LS DN++N+DT GF+ +++F ++ + S V+ Sbjct: 2 GFNTALSGIKASADALSVTGDNIANSDTTGFKQSRIEFGDLYNTSVVGAGSNNTIGSGVS 61 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + G+ T LD A++G +F L TR G FK+ DG LV+ G Sbjct: 62 VNNIAQAFSAGNIAYTDNNLDLAVDGTGFFVLNLGGTQAYTRAGDFKLDADGFLVTNDGA 121 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 A I + + ++ + + L S Sbjct: 122 NVEGYNAVDGIVGGNLENLQVPTDRIAPQATSDIQLQINLDSESND 167 Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 28/225 (12%), Positives = 72/225 (32%), Gaps = 16/225 (7%) Query: 31 TVGF---RTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGD 87 T+G+ + + E+V + + + Y+ +V T + +G Sbjct: 339 TLGYYFIKQGENNTFEMVVTVDGKTEYEDPITGEMTSYIPDDVVVTFDTAGNISSVAQGF 398 Query: 88 AWFALESPRGIILT------RDGRFKVTDDG--SLVSASGKYPVLDMASVPIQIPQKDEI 139 FA+ P + + R+ + +G +S + D + + Sbjct: 399 PPFAVTQPITLEIKGFDPTNREAVIPIDMNGSTQFALSSSDVFMQDGFTAGELQGVMFDE 458 Query: 140 FNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP-----LEDLSGVTV 194 +Q+ V+ + L + D + G ++ + + +V Sbjct: 459 DGFLIATYTNQQTSVLGQIALATFDNTDGLTPSGDTSWVASSDSGQANVGKPNTGTLGSV 518 Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + LE+SN + E+ +I + + + + ++ I Sbjct: 519 QGAALEESNVDLTSELVALIEAQRNYQANSKTLETENTVTQTIIN 563 >gi|47566136|ref|ZP_00237174.1| flagellar hook protein flgE, putative [Bacillus cereus G9241] gi|47557053|gb|EAL15383.1| flagellar hook protein flgE, putative [Bacillus cereus G9241] Length = 409 Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 31/197 (15%), Positives = 64/197 (32%), Gaps = 13/197 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49 M + + A + LS ++N++N TVG++ K F +++ Sbjct: 1 MIKALYTSITGMNATQNALSVTSNNIANAQTVGYKKQKAMFDDLLYNNSIGAKGDGNYAG 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107 + + V G+ TG + A+EG+ +F + TR G F Sbjct: 61 TNPKSIGNGVKMSGTVTDYSDGTITLTGGKTQAAMEGNGFFVVGDSKGGNMEFTRKGTFG 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 ++ D + + G+Y A+ I + + G + T G ++ Sbjct: 121 ISSDYYITNTEGQYVFAYPANEATGEVDLSGIPGPLQIPMGTAIGGIQTTKGTIKGNIPV 180 Query: 168 GFVRRENSGISPNIPPT 184 + + Sbjct: 181 NESKITQDLPFYDDAGN 197 Score = 65.3 bits (157), Expect = 8e-09, Method: Composition-based stats. Identities = 11/93 (11%), Positives = 30/93 (32%), Gaps = 5/93 (5%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYE 209 + + G ++ N + L + ++ G E +N + E Sbjct: 317 AGQLAVAMFPNEGGLMKTGNGNYTATNTTGILALGASGQNGAGKIRGGAQEGANVDLSVE 376 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 ++ + F +I +++ + E + I Sbjct: 377 FVDLMLYQRGFQGNAKVIKVSDEVLNEVVNLIR 409 >gi|212634348|ref|YP_002310873.1| flagellar hook protein FlgE [Shewanella piezotolerans WP3] gi|212555832|gb|ACJ28286.1| Flagellar basal body rod protein FlaE [Shewanella piezotolerans WP3] Length = 453 Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 38/184 (20%), Positives = 72/184 (39%), Gaps = 5/184 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61 SFNI L+ + ++ L+T A+N++N +T GF+ + +F++V + N VA+ Sbjct: 2 SFNIALSGISSAQKDLNTTANNIANVNTTGFKESRAEFADVYASSIFANSKTTVGGGVAT 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESP---RGIILTRDGRFKVTDDGSLVSAS 118 + GS T LD A+ G +F S + TR G FK + +V ++ Sbjct: 62 SQVAQQFHQGSLQFTNNSLDMAINGGGFFVTSSEIGSQDHSFTRAGAFKFDSNNYMVDSA 121 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178 G + + + V ++++ G + + Sbjct: 122 GNFLQTFPVDKDGNSTSVSLTTTEPVQIPDTAGSPVKTDNIGMQMNLNAGDKTFDPANFD 181 Query: 179 PNIP 182 P+ P Sbjct: 182 PDDP 185 Score = 67.6 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 34/91 (37%), Gaps = 5/91 (5%) Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMY 208 +A + L QG + N+ ++ P + +++ LE SN + Sbjct: 361 PLARVALVRFANEQGLSQAGNTSWKASLDSGPALAGEANSGTFGSIRSSALEQSNVDLTT 420 Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E+ +I + F + + ++ N ++ Sbjct: 421 ELVDLISAQRNFQANSRTLEVNNTLQQTVLQ 451 >gi|218896686|ref|YP_002445097.1| flagellar hook protein [Bacillus cereus G9842] gi|228900335|ref|ZP_04064565.1| Flagellar hook protein flgE [Bacillus thuringiensis IBL 4222] gi|218545583|gb|ACK97977.1| flagellar hook protein [Bacillus cereus G9842] gi|228859370|gb|EEN03800.1| Flagellar hook protein flgE [Bacillus thuringiensis IBL 4222] Length = 407 Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 31/197 (15%), Positives = 65/197 (32%), Gaps = 13/197 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49 M + + A + LS ++N++N TVG++ K F +++ Sbjct: 1 MIKALYTSITGMNATQNALSVTSNNIANAQTVGYKKQKAMFDDLLYNNSIGAKGDGKYAG 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107 + + V G+ TG + A+EG+ +F + TR G F Sbjct: 61 TNPKSIGNGVKMSGTVTDYSDGTITLTGGKTQAAMEGNGFFVVGDSKGGNMEFTRKGTFG 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 ++ D + + G+Y A+ I + + G + + G ++ Sbjct: 121 ISSDYYITNTEGQYVFAYPANEATGEVDLSGIPGPLQIPMGTAIGGIRTSKGTIKGNIPT 180 Query: 168 GFVRRENSGISPNIPPT 184 G + + Sbjct: 181 GEKQITQDLPVYDNAGN 197 Score = 65.3 bits (157), Expect = 7e-09, Method: Composition-based stats. Identities = 12/93 (12%), Positives = 30/93 (32%), Gaps = 5/93 (5%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYE 209 + + G ++ N + L + V+ G E +N + E Sbjct: 315 AGQLAVAMFPNEGGLMKTGNGNYTATNTTGILALGASGQNGAGKVRGGAQEGANVDLSVE 374 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 ++ + F +I +++ + E + I Sbjct: 375 FVDLMLYQRGFQGNAKVIKVSDEVLNEVVNLIR 407 >gi|146293690|ref|YP_001184114.1| flagellar hook protein FlgE [Shewanella putrefaciens CN-32] gi|145565380|gb|ABP76315.1| flagellar basal body FlaE domain protein [Shewanella putrefaciens CN-32] gi|319427089|gb|ADV55163.1| flagellar hook-basal body protein [Shewanella putrefaciens 200] Length = 453 Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 5/125 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61 SFNI L+ A ++ L+T A+N++N +T+GF+ + +F++V N VA+ Sbjct: 2 SFNIALSGISAAQKDLNTTANNIANANTIGFKESRAEFADVYANSIFSNSKTAVGGGVAT 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII---LTRDGRFKVTDDGSLVSAS 118 + GS T LD A++G +F S G + TR G FKV +V +S Sbjct: 62 SQVAQQFHQGSLQLTNNSLDLAIKGGGFFVTSSELGTLDFSYTRAGAFKVDASNYMVDSS 121 Query: 119 GKYPV 123 G Y Sbjct: 122 GNYLQ 126 Score = 65.3 bits (157), Expect = 8e-09, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 33/91 (36%), Gaps = 5/91 (5%) Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMY 208 +A + L QG + N+ ++ P + ++ LE SN + Sbjct: 361 PLARVALVRFANEQGLTQVGNTSWKASLNSGPALAGEANSGTFGSLSSSALEQSNIDLTT 420 Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E+ +I + F + + ++ N ++ Sbjct: 421 ELVDLISAQRNFQANSRTLEVNNTLQQTVLQ 451 >gi|23092315|gb|AAN08640.1| FlgE [Aeromonas hydrophila] Length = 453 Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 35/191 (18%), Positives = 69/191 (36%), Gaps = 5/191 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK--NDIDQKISFVAS 61 SFN L+ A ++ L+ A+N++N +++GF+ + +F++V N Q + VA+ Sbjct: 2 SFNNALSGVNAAQKDLNVTANNIANVNSIGFKESRAEFADVYANSIFVNAKTQVGNGVAT 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI---ILTRDGRFKVTDDGSLVSAS 118 G G+ T LD A++G+ +F TR G FK+ ++ +V+ Sbjct: 62 GAVAQQFHQGALQFTNNSLDLAIQGNGFFVTSDGLTNLDRTYTRAGAFKLDENSYMVNNQ 121 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178 G Y +V + + S + + Sbjct: 122 GHYLQGYEVNVDGTPKAVSINATKPIQIPDKAGVPTKTSTIEASFNFPSDAKPLAAGNTA 181 Query: 179 PNIPPTPLEDL 189 + + Sbjct: 182 TDASIFDPTND 192 Score = 64.9 bits (156), Expect = 9e-09, Method: Composition-based stats. Identities = 15/125 (12%), Positives = 41/125 (32%), Gaps = 5/125 (4%) Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 D ++V + + + +A + + SQG + ++ Sbjct: 327 NKLTQDGSTVGRLTKVEITADGIVSATYSNATTLKVAMVAMAKFANSQGLTQVGDTSWRQ 386 Query: 180 N-----IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 + P + ++K LE SN + ++ +I + F + + ++ N Sbjct: 387 SLLSGDALPGTPNSGTFGSIKSSSLEQSNVDLTSQLVNLITAQRNFQANSRSLEVNSSLQ 446 Query: 235 LEAIR 239 ++ Sbjct: 447 QTILQ 451 >gi|332187911|ref|ZP_08389644.1| flagellar hook-basal body s family protein [Sphingomonas sp. S17] gi|332012072|gb|EGI54144.1| flagellar hook-basal body s family protein [Sphingomonas sp. S17] Length = 430 Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 33/186 (17%), Positives = 68/186 (36%), Gaps = 5/186 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61 SF L+ A + +S ++ N++N T GF+ + +F++V+ A + Q S Sbjct: 2 SFYTSLSGLQASQTDMSVISHNLANVGTNGFKKSRAEFADVMAANFSTDPFKQVGSGTVV 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI---ILTRDGRFKVTDDGSLVSAS 118 + G++ ST LD A+ GD +F +++ TR+G F+V + + Sbjct: 62 KANRQEFKEGNYTSTSNALDLAISGDGFFTVQAGGTTGTLNYTRNGSFQVDTNNYVTDTQ 121 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178 G + + + + V +++S + Sbjct: 122 GNRLQVFPVDKDGNVTSFGNDGLTSLQLPPTSGTPVATKKVTLDINLSSTATAPTGAFDR 181 Query: 179 PNIPPT 184 N+ Sbjct: 182 TNMGTY 187 Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 14/94 (14%), Positives = 34/94 (36%), Gaps = 6/94 (6%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYE 209 + + + + G + NS + + ++ +E SN + E Sbjct: 338 LGKVAVATFVNMPGLRQEGNSYWEATGMSGAAKFGTANEGAYGAIRSSTIEGSNVDITEE 397 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 + +I + F + +D + + + + I NI S Sbjct: 398 LVNLIAAQRNFQANAKALDTSSQ-ISQTIFNIRS 430 >gi|163939559|ref|YP_001644443.1| flagellar hook protein FlgE [Bacillus weihenstephanensis KBAB4] gi|163861756|gb|ABY42815.1| protein of unknown function DUF1078 domain protein [Bacillus weihenstephanensis KBAB4] Length = 407 Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 31/197 (15%), Positives = 65/197 (32%), Gaps = 13/197 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49 M + + A + LS ++N++N TVG++ K F +++ Sbjct: 1 MIKALYTSITGMNATQNALSVTSNNIANAQTVGYKKQKAMFDDLLYNNSIGAKGDGKYAG 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107 + + V G+ TG + A+EG+ +F + TR G F Sbjct: 61 TNPKSIGNGVKMSGTVTDYSDGTITLTGGKTQAAMEGNGFFVVGDSKGGNMEFTRKGTFG 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 ++ D + + G+Y A+ I + + G + + G ++ Sbjct: 121 ISSDYYITNTEGQYVFAYPANEATGEVDLSGIPGPLQIPMGTAIGGIRTSQGTIKGNIPT 180 Query: 168 GFVRRENSGISPNIPPT 184 G + + Sbjct: 181 GEKQITQDLPVYDNAGN 197 Score = 64.9 bits (156), Expect = 9e-09, Method: Composition-based stats. Identities = 11/93 (11%), Positives = 30/93 (32%), Gaps = 5/93 (5%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYE 209 + + G ++ N + L + ++ G E +N + E Sbjct: 315 AGQLAVAMFPNEGGLMKTGNGNYTATNTTGILALGASGQNGAGKIRGGAQEGANVDLSVE 374 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 ++ + F +I +++ + E + I Sbjct: 375 FVDLMLYQRGFQGNAKVIKISDEVLNEVVNLIR 407 >gi|298530010|ref|ZP_07017412.1| fagellar hook-basal body protein [Desulfonatronospira thiodismutans ASO3-1] gi|298509384|gb|EFI33288.1| fagellar hook-basal body protein [Desulfonatronospira thiodismutans ASO3-1] Length = 755 Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 34/149 (22%), Positives = 58/149 (38%), Gaps = 5/149 (3%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---DIDQKISFV 59 +S G++ +++ T+ +N+SN TVGF+ ++ F + + N + Q V Sbjct: 5 SSMYTGVSGLKGHGEKMGTIGNNISNVSTVGFKGSRMHFEDFMSQDINTGAGVGQVGRGV 64 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFAL--ESPRGIILTRDGRFKVTDDGSLVSA 117 G GS ST D A+ GD +F + + TR G F+ ++G LV Sbjct: 65 GVGAVMNDFSQGSLESTNEATDVAIGGDGFFQVSARGTDENLYTRAGNFRFDEEGYLVDP 124 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKG 146 + D+ E G Sbjct: 125 NNNVVQGWEVREDPPGVADDDEIIQTETG 153 Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 26/209 (12%), Positives = 51/209 (24%), Gaps = 7/209 (3%) Query: 32 VGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA 91 G+ F + G + + + S + + G+ F Sbjct: 542 NGYPVFTPNFLGIEGQNFTGAEGAQNIEMNFGLRNQTGNWEAGSAESPAELTEFGNTDFN 601 Query: 92 LESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQK 151 ++ TR T S + + I G Sbjct: 602 FDNIAEFEETRREAQASTQYSSSSTTLMQNQDGYTTGFLQNIEIDRNGVLTGRYDNGQVM 661 Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANS 206 + + L QG + + S P T + LE SN + Sbjct: 662 D--LYALTLADFHNEQGLRKEGGNLFSETRSSGPAMTGLAGTRGLGEISSNSLEMSNVDL 719 Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSML 235 E ++I + F + + I + + Sbjct: 720 ATEFVKLIQTEKGFQANSKTIQTTDTMLG 748 >gi|294339843|emb|CAZ88206.1| putative Flagellar basal body FlaE (FlgE) [Thiomonas sp. 3As] Length = 415 Score = 89.5 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 28/129 (21%), Positives = 54/129 (41%), Gaps = 4/129 (3%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA----IKNDIDQKIS 57 ++F L+ A L + +N++N +TVGF++ +F++ A Q Sbjct: 1 MSTFQTALSGLQAASTDLQVMGNNIANANTVGFKSSNAQFADTYAAAIAGTSPQYGQVGI 60 Query: 58 FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSA 117 + G+ ST LD A+ G +F + R+G+F++ +G +V A Sbjct: 61 GTSVATVAQQFSQGNIESTSNPLDVAINGSGFFQFNYNGATVYGRNGQFQLDQNGYIVDA 120 Query: 118 SGKYPVLDM 126 +G + Sbjct: 121 AGGQLIGTP 129 Score = 41.4 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 31/194 (15%), Positives = 58/194 (29%), Gaps = 11/194 (5%) Query: 51 DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTD 110 D + SG + + +GT A G W SP I L G Sbjct: 227 DGTTAAGGITSGGPSTIQFTPTGAISGTATLTA-SGLTWADGASPSNITLNFAGSTNYNA 285 Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170 S+V++ + I +F G+ ++ G + T + QG Sbjct: 286 T-SVVNSLTTDGSSVGQLSNLSIDPSGVVFGRYTNGQSAKLGLITLT----NFKAPQGLQ 340 Query: 171 RRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225 R N+ P ++ +E SN + ++ +I Q + + Sbjct: 341 RLGNNYFVPTYASGQPLTGQPGGGGLGVLQSSAVEQSNVDLSSQLVNLIVAQQAYQANAQ 400 Query: 226 LIDENEKSMLEAIR 239 I + + + Sbjct: 401 TIKTQNQVVQTLLS 414 >gi|330811235|ref|YP_004355697.1| flagellar hook protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379343|gb|AEA70693.1| Putative flagellar hook protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 432 Score = 89.5 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 32/124 (25%), Positives = 56/124 (45%), Gaps = 2/124 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61 SFNIGL+ A ++L +N++N T GF++ + +F +V A + + V Sbjct: 2 SFNIGLSGLYAANKQLDVTGNNIANVATTGFKSSRAEFEDVYSATKLGSGSKTVGNGVRL 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 G +TG LD ++G +F L + + TR G FK +G + ++ G Sbjct: 62 ANVSQQFGQGDVNNTGNVLDMGIQGQGFFVLSNDGSLSYTRAGTFKTDKEGYITNSDGTS 121 Query: 122 PVLD 125 + Sbjct: 122 RLQG 125 Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 31/98 (31%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLED 201 + + K I + L S QG + + + ++ LE+ Sbjct: 333 FSNNQTKPIGQLALASFTNEQGLQPVGGTSWKETFASGIPGYDAPQTGTLGSIVSNSLEE 392 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN N E+ ++I + + I M I+ Sbjct: 393 SNVNLTNELVELIKAQSNYQANAKTISTQSTIMQTIIQ 430 >gi|320329353|gb|EFW85346.1| flagellar hook protein FlgE [Pseudomonas syringae pv. glycinea str. race 4] gi|330880525|gb|EGH14674.1| flagellar hook protein FlgE [Pseudomonas syringae pv. glycinea str. race 4] Length = 586 Score = 89.5 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 27/133 (20%), Positives = 56/133 (42%), Gaps = 3/133 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SFN ++ A +RL +N++N+ T+GF++ + +FS + A + + Sbjct: 2 SFNTAISGIHAANKRLEVAGNNIANSGTIGFKSSRAQFSALYSASQLGSGRNAVGDGVRL 61 Query: 64 EYLSKEVGS---FISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + + ++G LD ++G+ +F + + TR G F +V + G Sbjct: 62 ASMQQNFNQGESMTTSGNPLDMRIQGNGFFVVSDGGSLAYTRAGAFLKDAANFVVDSEGG 121 Query: 121 YPVLDMASVPIQI 133 A+ +I Sbjct: 122 RLQGYAANEQGEI 134 Score = 65.7 bits (158), Expect = 5e-09, Method: Composition-based stats. Identities = 17/99 (17%), Positives = 33/99 (33%), Gaps = 5/99 (5%) Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLE 200 G + K I + L S QG R ++ + + + + ++ LE Sbjct: 486 GFANGMNKNIGQVILASFANPQGLQARSDTRWTESADSGVADYDVPGVGTLGSLIGDGLE 545 Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN E+ +I + + + I M I+ Sbjct: 546 GSNVVLADELIALIQAQTAYQANSKAISTEATVMQTLIQ 584 >gi|298487856|ref|ZP_07005896.1| Flagellar hook protein flgE [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298157581|gb|EFH98661.1| Flagellar hook protein flgE [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 586 Score = 89.5 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 27/133 (20%), Positives = 56/133 (42%), Gaps = 3/133 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SFN ++ A +RL +N++N+ T+GF++ + +FS + A + + Sbjct: 2 SFNTAISGIHAANKRLEVAGNNIANSGTIGFKSSRAQFSALYSASQLGSGRNAVGDGVRL 61 Query: 64 EYLSKEVGS---FISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + + ++G LD ++G+ +F + + TR G F +V + G Sbjct: 62 ASMQQNFNQGESMTTSGNPLDMRIQGNGFFVVSDGGSLAYTRAGAFLKDAANFVVDSEGG 121 Query: 121 YPVLDMASVPIQI 133 A+ +I Sbjct: 122 RLQGYAANEQGEI 134 Score = 65.7 bits (158), Expect = 5e-09, Method: Composition-based stats. Identities = 17/99 (17%), Positives = 33/99 (33%), Gaps = 5/99 (5%) Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLE 200 G + K I + L S QG R ++ + + + + ++ LE Sbjct: 486 GFTNGMNKNIGQVILASFSNPQGLQARSDTRWTESADSGVADYDVPGVGTLGSLIGDGLE 545 Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN E+ +I + + + I M I+ Sbjct: 546 GSNVVLADELIALIQAQTAYQANSKAISTEATVMQTLIQ 584 >gi|289627764|ref|ZP_06460718.1| flagellar hook protein FlgE [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|330866423|gb|EGH01132.1| flagellar hook protein FlgE [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 586 Score = 89.5 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 27/133 (20%), Positives = 56/133 (42%), Gaps = 3/133 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SFN ++ A +RL +N++N+ T+GF++ + +FS + A + + Sbjct: 2 SFNTAISGIHAANKRLEVAGNNIANSGTIGFKSSRAQFSALYSASQLGSGRNAVGDGVRL 61 Query: 64 EYLSKEVGS---FISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + + ++G LD ++G+ +F + + TR G F +V + G Sbjct: 62 ASMQQNFNQGESMTTSGNPLDMRIQGNGFFVVSDGGSLAYTRAGAFLKDAANFVVDSEGG 121 Query: 121 YPVLDMASVPIQI 133 A+ +I Sbjct: 122 RLQGYAANEQGEI 134 Score = 65.7 bits (158), Expect = 5e-09, Method: Composition-based stats. Identities = 17/99 (17%), Positives = 33/99 (33%), Gaps = 5/99 (5%) Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLE 200 G + K I + L S QG R ++ + + + + ++ LE Sbjct: 486 GFTNGMNKNIGQVILASFANPQGLQARSDTRWTESADSGVADYDVPGVGTLGSLIGDGLE 545 Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN E+ +I + + + I M I+ Sbjct: 546 GSNVVLADELIALIQAQTAYQANSKAISTEATVMQTLIQ 584 >gi|292492363|ref|YP_003527802.1| flagellar basal body FlaE domain protein [Nitrosococcus halophilus Nc4] gi|291580958|gb|ADE15415.1| flagellar basal body FlaE domain protein [Nitrosococcus halophilus Nc4] Length = 425 Score = 89.5 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 31/135 (22%), Positives = 61/135 (45%), Gaps = 5/135 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG--AIKNDIDQKISFVAS 61 SFN L+ A L V++N++N +T GF+ + +F+++ + + S V Sbjct: 2 SFNTSLSGLNAASSDLDVVSNNIANANTTGFKRSRAEFADIFAVSSFGSPKTAVGSGVLL 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALES---PRGIILTRDGRFKVTDDGSLVSAS 118 + + G+ T LD A+ G +FAL ++ +R G F + DG +V+ + Sbjct: 62 NRAAQQFDQGNLDFTQNILDLAVSGRGFFALSPNLTNNELVYSRAGAFSINKDGYVVNGA 121 Query: 119 GKYPVLDMASVPIQI 133 G++ + + Sbjct: 122 GQFLRTYPVNQDGTV 136 Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 14/94 (14%), Positives = 29/94 (30%), Gaps = 5/94 (5%) Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNAN 205 + + + L QG + N+ + I ++ G LE SN + Sbjct: 330 QNLALGKVALAQFPNEQGLRQLGNNSWAGTIDSGAAIAGEAGNGSFGLIQGGALESSNVD 389 Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E+ +I + F + I+ + Sbjct: 390 LTAELVHLITAQRNFQANARAIETASTLTDSILN 423 >gi|289651646|ref|ZP_06482989.1| flagellar hook protein FlgE [Pseudomonas syringae pv. aesculi str. 2250] Length = 586 Score = 89.5 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 27/133 (20%), Positives = 56/133 (42%), Gaps = 3/133 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SFN ++ A +RL +N++N+ T+GF++ + +FS + A + + Sbjct: 2 SFNTAISGIHAANKRLEVAGNNIANSGTIGFKSSRAQFSALYSASQLGSGRNAVGDGVRL 61 Query: 64 EYLSKEVGS---FISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + + ++G LD ++G+ +F + + TR G F +V + G Sbjct: 62 ASMQQNFNQGESMTTSGNPLDMRIQGNGFFVVSDGGSLAYTRAGAFLKDAANFVVDSEGG 121 Query: 121 YPVLDMASVPIQI 133 A+ +I Sbjct: 122 RLQGYAANEQGEI 134 Score = 65.7 bits (158), Expect = 5e-09, Method: Composition-based stats. Identities = 17/99 (17%), Positives = 33/99 (33%), Gaps = 5/99 (5%) Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLE 200 G + K I + L S QG R ++ + + + + ++ LE Sbjct: 486 GFTNGMNKNIGQVILASFANPQGLQARSDTRWTESADSGVADYDVPGVGTLGSLIGDGLE 545 Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN E+ +I + + + I M I+ Sbjct: 546 GSNVVLADELIALIQAQTAYQANSKAISTEATVMQTLIQ 584 >gi|313624712|gb|EFR94667.1| flagellar hook protein FlgE [Listeria innocua FSL J1-023] Length = 411 Score = 89.5 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 34/181 (18%), Positives = 64/181 (35%), Gaps = 13/181 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + ++ A +Q LS ++N++N +T G++ V F++++ + Sbjct: 1 MNQTMYTAISGMNAFQQALSVTSNNIANANTTGYKKQSVVFNDLLYQNTMGSVAGGLYAG 60 Query: 61 SGKEYL-----------SKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107 + GS STG D AL+G +F + I+ TRDG F Sbjct: 61 TNPMSFGSGSKIGAILTDYTAGSPTSTGRNKDAALQGRGFFIAGDNAGGNIVYTRDGSFA 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 V+D+ L + GKY + + + ++ + Sbjct: 121 VSDNNYLTTQQGKYVMGYATDKNGNVLNGNLQPIQIPLNSAIPGEATKNGSLSGNIPLDW 180 Query: 168 G 168 G Sbjct: 181 G 181 Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 17/125 (13%), Positives = 31/125 (24%), Gaps = 5/125 (4%) Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 P D +A + + + G V+ N P + Sbjct: 286 PTSDGKGAATVKDYAVTDSGYIAVSYSDGTVIPVAQLAVATFSNEDGLVKMGNGEYVPGL 345 Query: 182 PPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + LE SN + E ++ F T +I + M + Sbjct: 346 SSGDAVYGVAGQNGAGGISGSSLEGSNVDLSREFVNLMTYQSGFQGNTKVIRVADDVMKQ 405 Query: 237 AIRNI 241 + I Sbjct: 406 IVNLI 410 >gi|120613059|ref|YP_972737.1| hypothetical protein Aave_4423 [Acidovorax citrulli AAC00-1] gi|120591523|gb|ABM34963.1| protein of unknown function DUF1078 domain protein [Acidovorax citrulli AAC00-1] Length = 425 Score = 89.5 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 44/188 (23%), Positives = 71/188 (37%), Gaps = 6/188 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN--DIDQKISFVAS 61 SF GL+ A + L + N++N+ TVGF+ + +F+E+V V Sbjct: 2 SFQQGLSGLNAASKNLDVIGHNVANSGTVGFKASRAEFAEMVANAIGSAGGTNAGIGVEL 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGK 120 G+ TG LD A+ GD +F L+ P G TR G FK+ +G LV+ + Sbjct: 62 SAVAQQFNQGNISVTGNSLDVAINGDGFFTLQQPDGSHAYTRAGNFKLDSNGQLVTNTKA 121 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 + I K N + K + + + + +G + Sbjct: 122 QVMGYALDP---ITGKRTASNAAPLTFPTSKPIPAKQTTTITAEFNLDARAPDAAGDATA 178 Query: 181 IPPTPLED 188 PP P Sbjct: 179 TPPVPATP 186 Score = 79.5 bits (194), Expect = 4e-13, Method: Composition-based stats. Identities = 15/89 (16%), Positives = 30/89 (33%), Gaps = 5/89 (5%) Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEM 210 + L S +QG N+ + ++ G LEDSN + E+ Sbjct: 335 GQVALASFRNTQGLASVGNNNWVETFQSGQPVLGTPTEGKFGGLRSGALEDSNVDLTAEL 394 Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIR 239 M+ + + + I ++ M + Sbjct: 395 VNMMTAQRAYQANAQTIKTQDQVMSTLVN 423 >gi|229189850|ref|ZP_04316861.1| Flagellar hook protein FlgE [Bacillus cereus ATCC 10876] gi|228593658|gb|EEK51466.1| Flagellar hook protein FlgE [Bacillus cereus ATCC 10876] Length = 437 Score = 89.5 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 31/181 (17%), Positives = 61/181 (33%), Gaps = 13/181 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49 M + + A + LS ++N++N TVG++ K F +++ Sbjct: 1 MIKALYTSITGMNAAQNALSVTSNNIANAQTVGYKKQKAIFDDLLYNNTVGSRGDGAYAG 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF--ALESPRGIILTRDGRFK 107 + + V GS T +++ A+EG F + + TR G F Sbjct: 61 TNPKSIGNGVKFSGTSTDFSDGSLTLTSDKMETAIEGKGLFLVGDRNSGNVEYTRKGSFG 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 V+ D + + SG+Y + Q + S G + ++ + Sbjct: 121 VSKDNYVTNTSGQYVLGYGVKTGTQEIDFSSRPSPIHIPMGSAVGGIQTDKATIGGNLPR 180 Query: 168 G 168 Sbjct: 181 N 181 Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 18/144 (12%), Positives = 40/144 (27%), Gaps = 9/144 (6%) Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 G +S + + I + G + KV+ + + + Sbjct: 298 SGLTNYPTGKTISTTEVTGRPAAIANDYSISDGGFVMMTYSDGSM----KVVGQLAVATF 353 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 S G ++ N V+ E SN + E ++ + Sbjct: 354 PNSGGLMKTGNGNYIATPSAGIPGIGVAGENGAGNVRGSAKESSNVDLSAEFVDLMLYQR 413 Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242 F +I +++ + E + I Sbjct: 414 GFQGNAKVIKVSDEVLNEVVNLIR 437 >gi|330875984|gb|EGH10133.1| flagellar hook protein FlgE [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 586 Score = 89.5 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 27/134 (20%), Positives = 57/134 (42%), Gaps = 3/134 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG- 62 SFN ++ A +RL +N++N+ T+GF++ + +FS + + + + Sbjct: 2 SFNTAISGINAANKRLEVAGNNIANSGTIGFKSSRAQFSALYSSAQLGSGRNAIGDGVRL 61 Query: 63 --KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + + S ++G LD ++G+ +F + + TR G F +V + G Sbjct: 62 AATQQNFNQGDSMTTSGNPLDMRIQGNGFFVVSDKGSLAYTRAGAFLKDAANFVVDSEGG 121 Query: 121 YPVLDMASVPIQIP 134 A+ +I Sbjct: 122 RLQGYAANDKGEIM 135 Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 35/99 (35%), Gaps = 5/99 (5%) Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLE 200 G + K I + L S +QG R ++ + + + + ++ G LE Sbjct: 486 GFTNGMNKSIGQVILASFANAQGLQARSDTRWTESAESGVADYEVPGVGTLGSLVGGALE 545 Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN E+ +I + + + I M I+ Sbjct: 546 GSNVVLADELIALIQAQTAYQANSKAISTEATVMQTLIQ 584 >gi|320179221|gb|EFW54179.1| Flagellar basal-body rod protein FlgG [Shigella boydii ATCC 9905] Length = 156 Score = 89.5 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 51/155 (32%), Gaps = 6/155 (3%) Query: 91 ALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEIS 149 + TRDG F+V +G LV+A G + + V + Sbjct: 1 MMLPDGSSAYTRDGSFQVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQ 60 Query: 150 QKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNA 204 + + L + G + + + + + +G++E SN Sbjct: 61 AAPVQVGQLNLTTFMNDTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVETSNV 120 Query: 205 NSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 N E+ MI + + + + + ++ + + + Sbjct: 121 NVAEELVNMIQVQRAYEINSKAVSTTDQMLQKLTQ 155 >gi|160939658|ref|ZP_02087006.1| hypothetical protein CLOBOL_04550 [Clostridium bolteae ATCC BAA-613] gi|158437449|gb|EDP15213.1| hypothetical protein CLOBOL_04550 [Clostridium bolteae ATCC BAA-613] Length = 550 Score = 89.5 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 37/204 (18%), Positives = 79/204 (38%), Gaps = 13/204 (6%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------KNDIDQKISFV 59 A + +L + +N++N +T GF++ + +F +V + Q Sbjct: 1 MQAHQTKLDVIGNNIANVNTYGFKSSRARFQDVYYQTLQSATGGDNNKGGTNASQVGYGA 60 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSAS 118 L+ + STG +D A+ G+ +F ++S I TR G ++ ++ + + Sbjct: 61 QLAGVDLNMGRSALQSTGRPMDVAITGEGFFQVMDSDGNIFYTRAGNLQLDNNSGNLVDA 120 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178 Y VL + P+ + ++ G+ + + T+ ++ + Sbjct: 121 NGYTVLGVTGDPLGKAAGADKIHLSIPGKNNAQSANSQTINGIEYTITSQNTTSAANVTI 180 Query: 179 PNIPPTPLEDLSGVTVKRGFLEDS 202 L D + + VK G L+DS Sbjct: 181 SFRLDDTLPDGADIVVKSGELKDS 204 Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 31/91 (34%), Gaps = 5/91 (5%) Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMY 208 I + L + D G NS + + +K LE SN + Sbjct: 457 QIGRIDLVTFDNPYGLEGVGNSYFKTTANSGDPKLCQAGENGTGALKTSSLEMSNVDIST 516 Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E MI + F + + +I ++ + E + Sbjct: 517 EFADMIVTQRGFQANSRIITVSDSILEELVN 547 >gi|71734109|ref|YP_275562.1| flagellar basal-body protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71554662|gb|AAZ33873.1| flagellar basal-body protein, putative [Pseudomonas syringae pv. phaseolicola 1448A] Length = 586 Score = 89.5 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 27/133 (20%), Positives = 56/133 (42%), Gaps = 3/133 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SFN ++ A +RL +N++N+ T+GF++ + +FS + A + + Sbjct: 2 SFNTAISGIHAANKRLEVAGNNIANSGTIGFKSSRAQFSALYSASQLGSGRNAVGDGVRL 61 Query: 64 EYLSKEVGS---FISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + + ++G LD ++G+ +F + + TR G F +V + G Sbjct: 62 ASMQQNFNQGESMTTSGNPLDMRIQGNGFFVVSDGGSLAYTRAGAFLKDAANFVVDSEGG 121 Query: 121 YPVLDMASVPIQI 133 A+ +I Sbjct: 122 RLQGYAANEQGEI 134 Score = 65.7 bits (158), Expect = 5e-09, Method: Composition-based stats. Identities = 17/99 (17%), Positives = 33/99 (33%), Gaps = 5/99 (5%) Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLE 200 G + K I + L S QG R ++ + + + + ++ LE Sbjct: 486 GFTNGMNKNIGQVILASFANPQGLQARSDTRWTESADSGVADYDVSGVGTLGSLIGDGLE 545 Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN E+ +I + + + I M I+ Sbjct: 546 GSNVVLADELIALIQAQTAYQANSKAISTEATVMQTLIQ 584 >gi|242280467|ref|YP_002992596.1| hypothetical protein Desal_3005 [Desulfovibrio salexigens DSM 2638] gi|242123361|gb|ACS81057.1| protein of unknown function DUF1078 domain protein [Desulfovibrio salexigens DSM 2638] Length = 549 Score = 89.5 bits (220), Expect = 4e-16, Method: Composition-based stats. Identities = 33/134 (24%), Positives = 52/134 (38%), Gaps = 5/134 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA---IKNDIDQKISFVA 60 S G+ A ++S + +N++N +TVGF++ K+ F + + + Q V Sbjct: 6 SLFSGITGLQAHGDKMSVLGNNIANVNTVGFKSAKMHFEDAISQDMSTATGVAQVGRGVQ 65 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI--ILTRDGRFKVTDDGSLVSAS 118 G Y GSF +T D A+ GD +F + TR G F+ DG L Sbjct: 66 VGAIYADFAQGSFETTSESTDLAIGGDGFFIVSPKDEETSYYTRAGNFRFDKDGYLTDPH 125 Query: 119 GKYPVLDMASVPIQ 132 G Sbjct: 126 GYVLQGWQVQDESN 139 Score = 78.4 bits (191), Expect = 7e-13, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 27/83 (32%), Gaps = 5/83 (6%) Query: 162 SVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHL 216 S + G R + + ++ LE SN + E MI Sbjct: 464 SFNNDWGLRREGGNLFTQTRESGDALTGLPNSSGKGSIASNSLEMSNVDLAVEFVSMITT 523 Query: 217 TQKFNSITTLIDENEKSMLEAIR 239 + F + + +I + M E I+ Sbjct: 524 QRGFQANSKVITTTDSMMGELIQ 546 >gi|330972414|gb|EGH72480.1| flagellar hook protein FlgE [Pseudomonas syringae pv. aceris str. M302273PT] Length = 582 Score = 89.5 bits (220), Expect = 4e-16, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 70/195 (35%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SFN ++ A +RL +N++N T+GF++ + +FS + + + Q Sbjct: 2 SFNTAISGIHAANKRLEVAGNNIANVGTLGFKSSRAQFSALYASAQLGAGQHAVGDGVRL 61 Query: 64 EYLSKEVGSFI---STGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + + S+G LD ++G+ +F + + TR G F +V + G Sbjct: 62 ASVQQNFNQGETVISSGNALDMRIQGNGFFVVSDQGSLAYTRAGAFLKDAANFVVDSDGG 121 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 A+ +I + + S G T ++++ Sbjct: 122 RLQGYAANDKGEIASGIR---TDLQIDTSNVGARATTTVAETINLDASLPSLARLPTFDP 178 Query: 181 IPPTPLEDLSGVTVK 195 P ++ T++ Sbjct: 179 ADPATYTRVATRTIQ 193 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 32/99 (32%), Gaps = 5/99 (5%) Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLE 200 G + K I + L S G R ++ + E + ++ G LE Sbjct: 482 GFTNGMTKDIGQVMLASFANPHGLQPRSDTRWAATADSGVAEYDVPGVGTLGSIVSGALE 541 Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN E+ +I + + + I M I+ Sbjct: 542 GSNVVLADELIALIQAQTAYQANSKAISTEVTLMQTLIQ 580 >gi|258621049|ref|ZP_05716083.1| flagellar hook protein [Vibrio mimicus VM573] gi|258625277|ref|ZP_05720185.1| flagellar hook protein [Vibrio mimicus VM603] gi|262170825|ref|ZP_06038503.1| flagellar hook protein FlgE [Vibrio mimicus MB-451] gi|258582450|gb|EEW07291.1| flagellar hook protein [Vibrio mimicus VM603] gi|258586437|gb|EEW11152.1| flagellar hook protein [Vibrio mimicus VM573] gi|261891901|gb|EEY37887.1| flagellar hook protein FlgE [Vibrio mimicus MB-451] Length = 434 Score = 89.5 bits (220), Expect = 4e-16, Method: Composition-based stats. Identities = 34/207 (16%), Positives = 72/207 (34%), Gaps = 13/207 (6%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGK 63 I L+ A + L+T ++N++N +T GF+ + +F +V N V + K Sbjct: 3 YISLSGLSAAQMDLNTTSNNIANANTFGFKESRAEFGDVYSTSLFTNAKTTPGQGVQAAK 62 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALES----PRGIILTRDGRFKVTDDGSLVSASG 119 GS I T LD + G +FA+ P+ LTR+G F + + +V+A+ Sbjct: 63 VAQQFHEGSSIYTNNPLDLRIAGTGFFAVAKDKIVPQQNELTRNGAFHLDKNSYMVTAND 122 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF-------VRR 172 ++ + + E + + + + ++ + + Sbjct: 123 EFLLGYEVNPDSGDVLSYEPKPINIPPQFGKPKQTANIDLGANLPANGELKDPTLFDITD 182 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFL 199 + + +L Sbjct: 183 PETYNRTTSSTIYDSMGQPYKLTTYYL 209 Score = 65.7 bits (158), Expect = 5e-09, Method: Composition-based stats. Identities = 15/122 (12%), Positives = 37/122 (30%), Gaps = 5/122 (4%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI- 181 D A+ + + + + + L V QG ++ + Sbjct: 311 DQDGATTGFLTKIDFDENGSVLATYSNGQNTTLGRVALVRVANEQGLDKKGGTQWDATQF 370 Query: 182 ----PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 S ++ G LE SN + E+ +I + F + + ++ + Sbjct: 371 SGDKIWGESNKGSFGSISNGSLEQSNIDMTQELVDLISAQRNFQANSRALEVHNGLQQNI 430 Query: 238 IR 239 ++ Sbjct: 431 LQ 432 >gi|91776309|ref|YP_546065.1| flagellar hook protein FlgE [Methylobacillus flagellatus KT] gi|91710296|gb|ABE50224.1| protein of unknown function DUF1078-like protein [Methylobacillus flagellatus KT] Length = 410 Score = 89.5 bits (220), Expect = 4e-16, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 58/123 (47%), Gaps = 2/123 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG- 62 +F GL+ A + + + +N++N TVGF+ + +F++V + + + Sbjct: 2 AFQQGLSGLNAASKNIEVIGNNVANASTVGFKQSRTEFADVYANSLGGGNASKIGIGTKI 61 Query: 63 -KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 G+ ++ LD A+ G+ +F + I +R+G+F++ DG + +A+G+ Sbjct: 62 AAITQQFTQGNISNSQNPLDVAINGNGFFRMSDNGAITYSRNGQFQLDKDGYIQNAAGQR 121 Query: 122 PVL 124 Sbjct: 122 LTG 124 Score = 75.7 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 32/98 (32%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLED 201 + + V+ + L + G ++ + P ++ LED Sbjct: 311 YSNGRSSVLGQVALANFRNLNGLQPLGDNQWAETSESGPPIVGVANSGGLGVLQSYRLED 370 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ MI + + + I ++ M + Sbjct: 371 SNVDLTAELVNMITAQRVYQANAQTIKTEDQIMQTLVN 408 >gi|229102353|ref|ZP_04233061.1| Flagellar hook protein flgE [Bacillus cereus Rock3-28] gi|229115194|ref|ZP_04244604.1| Flagellar hook protein flgE [Bacillus cereus Rock1-3] gi|228668334|gb|EEL23766.1| Flagellar hook protein flgE [Bacillus cereus Rock1-3] gi|228681000|gb|EEL35169.1| Flagellar hook protein flgE [Bacillus cereus Rock3-28] Length = 407 Score = 89.5 bits (220), Expect = 4e-16, Method: Composition-based stats. Identities = 31/197 (15%), Positives = 65/197 (32%), Gaps = 13/197 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49 M + + A + LS ++N++N TVG++ K F +++ Sbjct: 1 MIKALYTSITGMNATQNALSVTSNNIANAQTVGYKKQKAMFDDLLYNNSIGAKGDGKYAG 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107 + + V G+ TG + A+EG+ +F + TR G F Sbjct: 61 TNPKSIGNGVKMSGTVTDYSDGTITLTGGKTQAAMEGNGFFVVGDSKGGNMEFTRKGTFG 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 ++ D + + G+Y A+ I + + G + + G ++ Sbjct: 121 ISSDYYITNTEGQYVFAYPANEATGEVDLSGIPGPLQIPMGTAIGGIRTSKGTIKGNIPT 180 Query: 168 GFVRRENSGISPNIPPT 184 G + + Sbjct: 181 GEKQITQDLPVYDNAGN 197 Score = 65.3 bits (157), Expect = 8e-09, Method: Composition-based stats. Identities = 12/93 (12%), Positives = 30/93 (32%), Gaps = 5/93 (5%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYE 209 + + G ++ N + L + V+ G E +N + E Sbjct: 315 AGQLAVAMFPNEGGLMKTGNGNYTATNTTGILALGASGQNGAGKVRGGAQEGANVDLSVE 374 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 ++ + F +I +++ + E + I Sbjct: 375 FVDLMLYQRGFQGNAKVIKVSDEVLNEVVNLIR 407 >gi|229166594|ref|ZP_04294346.1| Flagellar hook protein flgE [Bacillus cereus AH621] gi|228616848|gb|EEK73921.1| Flagellar hook protein flgE [Bacillus cereus AH621] Length = 407 Score = 89.5 bits (220), Expect = 4e-16, Method: Composition-based stats. Identities = 31/197 (15%), Positives = 65/197 (32%), Gaps = 13/197 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49 M + + A + LS ++N++N TVG++ K F +++ Sbjct: 1 MIKALYTSITGMNATQNALSVTSNNIANAQTVGYKKQKAMFDDLLYNNSIGAKGDGKYAG 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107 + + V G+ TG + A+EG+ +F + TR G F Sbjct: 61 TNPKSIGNGVKMSGTVTDYSDGTITLTGGKTQAAMEGNGFFVVGDSKGGNMEFTRKGTFG 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 ++ D + + G+Y A+ I + + G + + G ++ Sbjct: 121 ISSDYYITNTEGQYVFAYPANEATGEVDLSGIPGPLQIPMGTAIGGIRTSQGTIKGNIPT 180 Query: 168 GFVRRENSGISPNIPPT 184 G + + Sbjct: 181 GEKQITQDLPVYDNAGN 197 Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 11/93 (11%), Positives = 30/93 (32%), Gaps = 5/93 (5%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYE 209 + + G ++ N + L + ++ G E +N + E Sbjct: 315 AGQLAVAMFPNEGGLMKTGNGNYTATNTTGILALGASGQNGAGKIRGGAQEGANVDLSVE 374 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 ++ + F +I +++ + E + I Sbjct: 375 FVDLMLYQRGFQGNAKVIKISDEVLNEVVNLIR 407 >gi|229160717|ref|ZP_04288709.1| Flagellar hook protein flgE [Bacillus cereus R309803] gi|228622732|gb|EEK79566.1| Flagellar hook protein flgE [Bacillus cereus R309803] Length = 407 Score = 89.5 bits (220), Expect = 4e-16, Method: Composition-based stats. Identities = 31/181 (17%), Positives = 63/181 (34%), Gaps = 13/181 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49 M + ++ A + LS ++N++N TVG++ K F +++ Sbjct: 1 MIKALYTSISGMNATQNALSVTSNNIANAQTVGYKKQKAMFDDLLYNNSVGAKGDERYAG 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107 + + V G+ TG + A+EG+ +F + TR G F Sbjct: 61 TNPKSIGNGVKMSGTVTDYSDGTITLTGGKTQVAMEGNGFFVVGDSKAGNMEFTRKGTFT 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 ++ D + + G+Y A I + S G + + G+ ++ Sbjct: 121 ISSDYYITNTEGQYVFAYPADPSTGNVDLSGIPGPLQIPMGSAIGGIRTSKGIVGGNIPA 180 Query: 168 G 168 Sbjct: 181 D 181 Score = 65.3 bits (157), Expect = 7e-09, Method: Composition-based stats. Identities = 12/93 (12%), Positives = 29/93 (31%), Gaps = 5/93 (5%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYE 209 + + G ++ N + L V+ G E +N + E Sbjct: 315 AGQLAVGMFPNEGGLMKTGNGNFTATNTTGILALGVSGQNGAGKVRGGAQEGANVDLSVE 374 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 ++ + F +I +++ + E + I Sbjct: 375 FVDLMLYQRGFQGNAKVIKISDEVLNEVVNLIR 407 >gi|229096239|ref|ZP_04227212.1| Flagellar hook protein flgE [Bacillus cereus Rock3-29] gi|228687199|gb|EEL41104.1| Flagellar hook protein flgE [Bacillus cereus Rock3-29] Length = 407 Score = 89.5 bits (220), Expect = 4e-16, Method: Composition-based stats. Identities = 31/197 (15%), Positives = 65/197 (32%), Gaps = 13/197 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49 M + + A + LS ++N++N TVG++ K F +++ Sbjct: 1 MIKALYTSITGMNATQNALSVTSNNIANAQTVGYKKQKAMFDDLLYNNSIGAKSDGKYAG 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107 + + V G+ TG + A+EG+ +F + TR G F Sbjct: 61 TNPKSIGNGVKMSGTVTDYSDGTITLTGGKTQAAMEGNGFFVVGDSKGGNMEFTRKGTFG 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 ++ D + + G+Y A+ I + + G + + G ++ Sbjct: 121 ISSDYYITNTEGQYVFAYPANEATGEVDLSGIPGPLQIPMGTAIGGIRTSKGTIKGNIPT 180 Query: 168 GFVRRENSGISPNIPPT 184 G + + Sbjct: 181 GEKQITQDLPVYDNAGN 197 Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 12/93 (12%), Positives = 30/93 (32%), Gaps = 5/93 (5%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYE 209 + + G ++ N + L + V+ G E +N + E Sbjct: 315 AGQLAVAMFPNEGGLMKTGNGNYTATNTTGILALGASGQNGAGKVRGGAQEGANVDLSIE 374 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 ++ + F +I +++ + E + I Sbjct: 375 FVDLMLYQRGFQGNAKVIKVSDEVLNEVVNLIR 407 >gi|171320708|ref|ZP_02909721.1| protein of unknown function DUF1078 domain protein [Burkholderia ambifaria MEX-5] gi|171094035|gb|EDT39133.1| protein of unknown function DUF1078 domain protein [Burkholderia ambifaria MEX-5] Length = 388 Score = 89.2 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 2/116 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV--GAIKNDIDQKISF 58 M S IG++ A + L T+ DN++N +T GF++ +F ++ + + S Sbjct: 1 MLDSIYIGMSGLAAYSKGLQTIGDNVANLNTPGFKSSAPRFQDLCDGRPTAREGKRSGSG 60 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSL 114 VA L+ G + +LD A++GD AL I R G+F + DDG + Sbjct: 61 VAYAHATLNFRQGELRGSTGQLDLAIDGDGLLALRDGDTIRYARTGQFHIADDGFV 116 Score = 67.6 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 34/87 (39%), Gaps = 4/87 (4%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS----GVTVKRGFLEDSNANSMYEM 210 + L Q VR + P P S ++ G +E SN + E Sbjct: 295 AGAVALARFADPQRLVRLGAGLFDASHLPPPRYAKSGDPLVGQLRSGAVEASNVDLSGEF 354 Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEA 237 GQ+I + + F + + +I + + +++ Sbjct: 355 GQLILIQRGFQAASQVISTSNEMIMQL 381 >gi|331017025|gb|EGH97081.1| flagellar hook protein FlgE [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 586 Score = 89.2 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 27/134 (20%), Positives = 57/134 (42%), Gaps = 3/134 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG- 62 SFN ++ A +RL +N++N+ T+GF++ + +FS + + + + Sbjct: 2 SFNTAISGINAANKRLEVAGNNIANSGTIGFKSSRAQFSALYSSAQLGSGRNAIGDGVRL 61 Query: 63 --KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + + S ++G LD ++G+ +F + + TR G F +V + G Sbjct: 62 AATQQNFNQGDSMTTSGNPLDMRIQGNGFFVVSDKGSLAYTRAGAFLKDAANFVVDSDGG 121 Query: 121 YPVLDMASVPIQIP 134 A+ +I Sbjct: 122 RLQGYAANDKGEIM 135 Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 34/99 (34%), Gaps = 5/99 (5%) Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLE 200 G + K I + L S QG R ++ + + + + ++ G LE Sbjct: 486 GFTNGMNKNIGQVILASFANPQGLQARSDTRWTESAESGVADYEVPGVGTLGSLVGGALE 545 Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN E+ +I + + + I M I+ Sbjct: 546 GSNVVLADELIALIQAQTAYQANSKAISTEATVMQTLIQ 584 >gi|258404710|ref|YP_003197452.1| fagellar hook-basal body protein [Desulfohalobium retbaense DSM 5692] gi|257796937|gb|ACV67874.1| fagellar hook-basal body protein [Desulfohalobium retbaense DSM 5692] Length = 433 Score = 89.2 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 30/153 (19%), Positives = 60/153 (39%), Gaps = 5/153 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG---AIKNDIDQKISFVA 60 + G++A A + ++ + +N++N++T F+ + FS+++ + + Q + V Sbjct: 6 ALYTGVSALGATGEAMNVIGNNLANSNTTAFKASRTLFSDLLASDVSSSSGTSQVGTGVG 65 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG--IILTRDGRFKVTDDGSLVSAS 118 G F T + D A+EG+ +F + P TR G F D+G LV+ Sbjct: 66 LASVDTVFSQGGFNPTESSTDLAIEGEGFFKVSDPNTGADAYTRAGGFNFNDEGFLVNPQ 125 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQK 151 G + G + + Sbjct: 126 GYRVQGYDVDGDGNTVGNLKDIYTDLSGSVPAQ 158 Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 15/89 (16%), Positives = 30/89 (33%), Gaps = 4/89 (4%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNI----PPTPLEDLSGVTVKRGFLEDSNANSMYEM 210 +A +GL + G + NS P T++ LE S + + Sbjct: 342 LAKLGLAKFANNNGLAQVGNSLFEATNASGLPAIGTPGAGVGTIRSNALEQSTVDIAKQF 401 Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIR 239 MI + + + + I + + E + Sbjct: 402 TDMITTQRAYQANSRTITTTDDMLQEVVN 430 >gi|66046706|ref|YP_236547.1| flagellar basal body rod protein:protein of unknown function DUF1078:flagellar basal body FlaE [Pseudomonas syringae pv. syringae B728a] gi|63257413|gb|AAY38509.1| Flagellar basal body rod protein:Protein of unknown function DUF1078:Flagellar basal body FlaE [Pseudomonas syringae pv. syringae B728a] Length = 582 Score = 89.2 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 28/133 (21%), Positives = 55/133 (41%), Gaps = 3/133 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SFN ++ A +RL +N++N T+GF++ + +FS + + + Q Sbjct: 2 SFNTAISGIHAANKRLEVAGNNIANVGTLGFKSSRAQFSALYASAQLGAGQHAVGDGVRL 61 Query: 64 EYLSKEVGSFI---STGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + + S+G LD ++G+ +F + + TR G F +V + G Sbjct: 62 ASVQQNFNQGETVISSGNALDMRIQGNGFFVVSDQGSLAYTRAGAFLKDAANFVVDSDGG 121 Query: 121 YPVLDMASVPIQI 133 A+ +I Sbjct: 122 RLQGYAANDKGEI 134 Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 32/99 (32%), Gaps = 5/99 (5%) Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLE 200 G + K I + L S G R ++ + E + ++ G LE Sbjct: 482 GFTNGMTKDIGQVMLASFANPHGLQPRSDTRWTATADSGVAEYDVPGVGTLGSIVSGALE 541 Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN E+ +I + + + I M I+ Sbjct: 542 GSNVVLADELIALIQAQTAYQANSKAISTEVTLMQTLIQ 580 >gi|330899403|gb|EGH30822.1| flagellar hook protein FlgE [Pseudomonas syringae pv. japonica str. M301072PT] Length = 581 Score = 89.2 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 28/133 (21%), Positives = 55/133 (41%), Gaps = 3/133 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SFN ++ A +RL +N++N T+GF++ + +FS + + + Q Sbjct: 2 SFNTAISGIHAANKRLEVAGNNIANVGTLGFKSSRAQFSALYASAQLGAGQHAVGDGVRL 61 Query: 64 EYLSKEVGSFI---STGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + + S+G LD ++G+ +F + + TR G F +V + G Sbjct: 62 ASVQQNFNQGETVISSGNALDMRIQGNGFFVVSDQGSLAYTRAGAFLKDAANFVVDSDGG 121 Query: 121 YPVLDMASVPIQI 133 A+ +I Sbjct: 122 RLQGYAANDKGEI 134 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 21/129 (16%), Positives = 40/129 (31%), Gaps = 5/129 (3%) Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 ++S +D S + + G + K I + L S G R ++ Sbjct: 451 TSSRSAAYVDGHSAGELKSLEVGRDGILRAGFTNGMTKSIGQVMLASFANPHGLQPRSDT 510 Query: 176 GISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + E + ++ G LE SN E+ +I + + + I Sbjct: 511 RWTATADSGVAEYDVPGVGTLGSIVSGALEGSNVVLADELIALIQAQTAYQANSKAISTE 570 Query: 231 EKSMLEAIR 239 M I+ Sbjct: 571 VTLMQTLIQ 579 >gi|315281358|ref|ZP_07869998.1| flagellar hook protein FlgE [Listeria marthii FSL S4-120] gi|313614997|gb|EFR88501.1| flagellar hook protein FlgE [Listeria marthii FSL S4-120] Length = 411 Score = 89.2 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 34/181 (18%), Positives = 64/181 (35%), Gaps = 13/181 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + ++ A +Q LS ++N++N +T G++ V F++++ + Sbjct: 1 MNQTMYTAISGMNAFQQALSVTSNNIANANTTGYKKQSVVFNDLLYQNTMGSVAGGLYAG 60 Query: 61 SGKEYL-----------SKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107 + GS STG D AL+G +F + I+ TRDG F Sbjct: 61 TNPMSFGSGSKIGAILTDYTAGSPTSTGRNKDAALQGRGFFIAGDNAGGNIVYTRDGSFA 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 V+D+ L + GKY + + + ++ + Sbjct: 121 VSDNNYLTTQQGKYVMGYATDKNGNVLNGNLQPIQIPLNSAIPGEATKNGSLSGNIPLDW 180 Query: 168 G 168 G Sbjct: 181 G 181 Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 17/125 (13%), Positives = 31/125 (24%), Gaps = 5/125 (4%) Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 P D +A + + + G V+ N P + Sbjct: 286 PTSDGKGAATVKDYAVTDAGYIAVSYSDGTVIPVAQLAVATFSNEDGLVKMGNGEYLPGL 345 Query: 182 PPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + LE SN + E ++ F T +I + M + Sbjct: 346 SSGDAVYGVAGQNGAGGISGSSLEGSNVDLSREFVNLMTYQSGFQGNTKVIRVADDVMKQ 405 Query: 237 AIRNI 241 + I Sbjct: 406 IVNLI 410 >gi|187924404|ref|YP_001896046.1| flagellar basal body FlaE domain protein [Burkholderia phytofirmans PsJN] gi|187715598|gb|ACD16822.1| flagellar basal body FlaE domain protein [Burkholderia phytofirmans PsJN] Length = 410 Score = 89.2 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 27/133 (20%), Positives = 57/133 (42%), Gaps = 2/133 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 S+ GL+ A L + +N++N +TVGF++ +F+++ + + Sbjct: 2 SYQTGLSGLSAASTDLDVIGNNIANANTVGFKSSTAQFADMYANAVMTAANNQVGIGTRL 61 Query: 64 EY--LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 G+F T LD A+ G+ +F L + ++ +R+G F + G + +A G Sbjct: 62 STAEQDFSNGTFSKTDRPLDIAINGNGFFQLSNNGALVYSRNGVFHLDKSGVIENAQGLP 121 Query: 122 PVLDMASVPIQIP 134 + ++ Sbjct: 122 LMGYSPGPDGKMN 134 Score = 69.5 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 23/195 (11%), Positives = 53/195 (27%), Gaps = 6/195 (3%) Query: 51 DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTD 110 S +F ++G + + T+ +T Sbjct: 215 GTSGNPPAPVGPNPSGSMGTITFDTSGHLTSPNASALTFNIPNAADNGATTQSLTLNLTG 274 Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI-ATMGLYSVDMSQGF 169 +G +L + Q+ + G S ++ + L + G Sbjct: 275 TTQYAGKNGVTALLPDGNSSGQLTGFSVGEDGTLTGSYSNGATLVLGQVALATFSNPNGL 334 Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFL-----EDSNANSMYEMGQMIHLTQKFNSIT 224 N+ + + S + G L EDSN + +++ +I + + + + Sbjct: 335 ANMGNNLYAQTGDSGAAQVSSPGSTNHGVLLGGQTEDSNVDLTHQLVDLITAQRNYQANS 394 Query: 225 TLIDENEKSMLEAIR 239 I + I Sbjct: 395 QTIKTQQTVDQALIN 409 >gi|320354325|ref|YP_004195664.1| flagellar hook-basal body protein [Desulfobulbus propionicus DSM 2032] gi|320122827|gb|ADW18373.1| flagellar hook-basal body protein [Desulfobulbus propionicus DSM 2032] Length = 434 Score = 89.2 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 31/136 (22%), Positives = 60/136 (44%), Gaps = 5/136 (3%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI---KNDIDQKISF 58 Q++ G++ Q +S + +N++NT+T+GF+ + FS+++ + Q Sbjct: 4 QSALYSGVSGLNTNSQAMSVIGNNLANTNTLGFKGSRSIFSDLLSSNVFGSGGTSQVGRG 63 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI--ILTRDGRFKVTDDGSLVS 116 V G+F +T ++ D A+EG +F L+ +R G F+ D+G LV+ Sbjct: 64 VGLSIVDSIYSQGTFETTSSDTDVAIEGVGFFVLKEAGNDTAYYSRAGAFRFDDEGYLVN 123 Query: 117 ASGKYPVLDMASVPIQ 132 G + Sbjct: 124 PEGFRVQGKLFDPTNN 139 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 14/89 (15%), Positives = 28/89 (31%), Gaps = 4/89 (4%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL----SGVTVKRGFLEDSNANSMYEM 210 I+ + L G + + + LE SN + E Sbjct: 343 ISQLVLAKFQNPGGLKLAGANRYIAPAEAGTIRVGLPGPELGKLFTNSLEQSNVDMGQEF 402 Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +MI + F + + +I ++ + E I Sbjct: 403 VKMITTQRGFQANSKIITTVDEMLSELIN 431 >gi|16799780|ref|NP_470048.1| flagellar hook protein FlgE [Listeria innocua Clip11262] gi|16802739|ref|NP_464224.1| flagellar hook protein FlgE [Listeria monocytogenes EGD-e] gi|47095263|ref|ZP_00232874.1| flagellar hook protein FlgE, putative [Listeria monocytogenes str. 1/2a F6854] gi|116872086|ref|YP_848867.1| flagellar hook protein FlgE [Listeria welshimeri serovar 6b str. SLCC5334] gi|224498779|ref|ZP_03667128.1| flagellar hook protein FlgE [Listeria monocytogenes Finland 1988] gi|224501998|ref|ZP_03670305.1| flagellar hook protein FlgE [Listeria monocytogenes FSL R2-561] gi|254829354|ref|ZP_05234041.1| flagellar hook protein FlgE [Listeria monocytogenes FSL N3-165] gi|254900067|ref|ZP_05259991.1| flagellar hook protein FlgE [Listeria monocytogenes J0161] gi|254911380|ref|ZP_05261392.1| conserved hypothetical protein [Listeria monocytogenes J2818] gi|254935707|ref|ZP_05267404.1| flagellar hook protein FlgE [Listeria monocytogenes F6900] gi|255027496|ref|ZP_05299482.1| flagellar hook protein FlgE [Listeria monocytogenes FSL J2-003] gi|16410086|emb|CAC98775.1| lmo0697 [Listeria monocytogenes EGD-e] gi|16413157|emb|CAC95937.1| lin0705 [Listeria innocua Clip11262] gi|47016334|gb|EAL07256.1| flagellar hook protein FlgE, putative [Listeria monocytogenes str. 1/2a F6854] gi|116740964|emb|CAK20084.1| flagellar hook protein FlgE, putative [Listeria welshimeri serovar 6b str. SLCC5334] gi|258601767|gb|EEW15092.1| flagellar hook protein FlgE [Listeria monocytogenes FSL N3-165] gi|258608290|gb|EEW20898.1| flagellar hook protein FlgE [Listeria monocytogenes F6900] gi|293589317|gb|EFF97651.1| conserved hypothetical protein [Listeria monocytogenes J2818] gi|313620066|gb|EFR91579.1| flagellar hook protein FlgE [Listeria innocua FSL S4-378] Length = 411 Score = 89.2 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 34/181 (18%), Positives = 64/181 (35%), Gaps = 13/181 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + ++ A +Q LS ++N++N +T G++ V F++++ + Sbjct: 1 MNQTMYTAISGMNAFQQALSVTSNNIANANTTGYKKQSVVFNDLLYQNTMGSVAGGLYAG 60 Query: 61 SGKEYL-----------SKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107 + GS STG D AL+G +F + I+ TRDG F Sbjct: 61 TNPMSFGSGSKIGAILTDYTAGSPTSTGRNKDAALQGRGFFIAGDNAGGNIVYTRDGSFA 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 V+D+ L + GKY + + + ++ + Sbjct: 121 VSDNNYLTTQQGKYVMGYATDKNGNVLNGNLQPIQIPLNSAIPGEATKNGSLSGNIPLDW 180 Query: 168 G 168 G Sbjct: 181 G 181 Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 17/125 (13%), Positives = 31/125 (24%), Gaps = 5/125 (4%) Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 P D +A + + + G V+ N P + Sbjct: 286 PTSDGKGAATVKDYAVTDSGYIAVSYSDGTVIPVAQLAVATFSNEDGLVKMGNGEYVPGL 345 Query: 182 PPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + LE SN + E ++ F T +I + M + Sbjct: 346 SSGDAVYGVAGQNGAGGISGSSLEGSNVDLSREFVNLMTYQSGFQGNTKVIRVADDVMKQ 405 Query: 237 AIRNI 241 + I Sbjct: 406 IVNLI 410 >gi|289433975|ref|YP_003463847.1| flagellar hook protein FlgE, putative [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170219|emb|CBH26759.1| flagellar hook protein FlgE, putative [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|313634374|gb|EFS00969.1| flagellar hook protein FlgE [Listeria seeligeri FSL N1-067] gi|313639059|gb|EFS04046.1| flagellar hook protein FlgE [Listeria seeligeri FSL S4-171] Length = 411 Score = 89.2 bits (219), Expect = 5e-16, Method: Composition-based stats. Identities = 35/146 (23%), Positives = 60/146 (41%), Gaps = 13/146 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49 M + ++ A +Q LS ++N++N +T G++ V F++++ Sbjct: 1 MNQTMYTAISGMNAFQQALSVTSNNIANANTTGYKKQSVVFNDLLYQNTMGSVAGGLYAG 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107 + S G GS STG D AL+G +F + I+ TRDG F Sbjct: 61 TNPMSFGSGAKIGAILTDYTAGSPTSTGRNKDAALQGRGFFIAGDNAGGNIVYTRDGSFA 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQI 133 V+D+ L + GKY + + Sbjct: 121 VSDNNYLTTQQGKYVMGYATDKNGNV 146 Score = 64.9 bits (156), Expect = 9e-09, Method: Composition-based stats. Identities = 21/175 (12%), Positives = 44/175 (25%), Gaps = 8/175 (4%) Query: 72 SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPI 131 ++ + G + A + I D ++ + + P D Sbjct: 239 NYNAQGELTNAAALRNIQINTTVNGKQI---DMDLNLSGLTNYGTNQVFSPTSDGKGAAT 295 Query: 132 QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-- 189 +A + + + G V+ N P + Sbjct: 296 VKDYAITDSGYIAVSYSDGTVIPVAQLAVATFSNEDGLVKMGNGEYVPGLSSGDAVYGVA 355 Query: 190 ---SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 + LE SN + E ++ F T +I + M + + I Sbjct: 356 GQNGAGGISGSSLEGSNVDLSREFVNLMTYQSGFQGNTKVIRVADDVMKQIVNLI 410 >gi|213967581|ref|ZP_03395729.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tomato T1] gi|301385714|ref|ZP_07234132.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tomato Max13] gi|302060074|ref|ZP_07251615.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tomato K40] gi|302134833|ref|ZP_07260823.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213927882|gb|EEB61429.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tomato T1] Length = 586 Score = 89.2 bits (219), Expect = 5e-16, Method: Composition-based stats. Identities = 27/134 (20%), Positives = 57/134 (42%), Gaps = 3/134 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG- 62 SFN ++ A +RL +N++N+ T+GF++ + +FS + + + + Sbjct: 2 SFNTAISGINAANKRLEVAGNNIANSGTIGFKSSRAQFSALYSSAQLGSGRNAIGDGVRL 61 Query: 63 --KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + + S ++G LD ++G+ +F + + TR G F +V + G Sbjct: 62 AATQQNFNQGDSMTTSGNPLDMRIQGNGFFVVSDKGSLAYTRAGAFLKDAANFVVDSEGG 121 Query: 121 YPVLDMASVPIQIP 134 A+ +I Sbjct: 122 RLQGYAANDKGEIM 135 Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 34/99 (34%), Gaps = 5/99 (5%) Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLE 200 G + K I + L S QG R ++ + + + + ++ G LE Sbjct: 486 GFTNGMNKNIGQVILASFANPQGLQARSDTRWTESAESGVADYEVPGVGTLGSLVGGALE 545 Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN E+ +I + + + I M I+ Sbjct: 546 GSNVVLADELIALIQAQTAYQANSKAISTEATVMQTLIQ 584 >gi|254830312|ref|ZP_05234967.1| flagellar hook protein FlgE [Listeria monocytogenes 10403S] Length = 411 Score = 89.2 bits (219), Expect = 5e-16, Method: Composition-based stats. Identities = 34/181 (18%), Positives = 64/181 (35%), Gaps = 13/181 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + ++ A +Q LS ++N++N +T G++ V F++++ + Sbjct: 1 MNQTMYTAISGMNAFQQALSVTSNNIANANTTGYKKQSVVFNDLLYQNTMGSVAGGLYAG 60 Query: 61 SGKEYL-----------SKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107 + GS STG D AL+G +F + I+ TRDG F Sbjct: 61 TNPMSFGSGSKIGAILTDYTAGSPTSTGRNKDAALQGRGFFIAGDNAGGNIVYTRDGSFA 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 V+D+ L + GKY + + + ++ + Sbjct: 121 VSDNNYLTTQQGKYVMGYATDKNGNVLNGNLQPIQIPLNSAIPGEATKNGSLSGNIPLDW 180 Query: 168 G 168 G Sbjct: 181 G 181 Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 17/125 (13%), Positives = 31/125 (24%), Gaps = 5/125 (4%) Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 P D +A + + + G V+ N P + Sbjct: 286 PTSDGKGAATVKDYAVTDAGYIAVSYSDGTVIPVAQLAVATFSNEDGLVKMGNGEYVPGL 345 Query: 182 PPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + LE SN + E ++ F T +I + M + Sbjct: 346 SSGDAVYGVAGQNGAGGISGSSLEGSNVDLSREFVNLMTYQSGFQGNTKVIRVADDVMKQ 405 Query: 237 AIRNI 241 + I Sbjct: 406 IVNLI 410 >gi|309788147|ref|ZP_07682753.1| flagellar basal-body rod protein flgG [Shigella dysenteriae 1617] gi|308923999|gb|EFP69500.1| flagellar basal-body rod protein flgG [Shigella dysenteriae 1617] Length = 156 Score = 89.2 bits (219), Expect = 5e-16, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 51/155 (32%), Gaps = 6/155 (3%) Query: 91 ALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKD-EIFNVGEKGEIS 149 + TRDG F+V +G LV+A G + + V + Sbjct: 1 MMLPDGSSAYTRDGSFQVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQ 60 Query: 150 QKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNA 204 + + L + G + + + + + +G++E SN Sbjct: 61 AAPVQVGQLNLTTFMNDTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVETSNV 120 Query: 205 NSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 N E+ MI + + + + + ++ + + + Sbjct: 121 NVAEELVNMIQVQRAYEINSKAMSTTDQMLQKLTQ 155 >gi|77460469|ref|YP_349976.1| flagellar hook protein FlgE [Pseudomonas fluorescens Pf0-1] gi|77384472|gb|ABA75985.1| putative flagellar hook protein [Pseudomonas fluorescens Pf0-1] Length = 443 Score = 89.2 bits (219), Expect = 5e-16, Method: Composition-based stats. Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 2/117 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--ISFVAS 61 SFNIGL+ A ++L +N++N T GF++ + +F +V + + K + V Sbjct: 2 SFNIGLSGLYAANKQLDVTGNNIANVATAGFKSSRAEFEDVYSSTRLGSGSKVIGNGVRL 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSAS 118 G +TG LD + G +F + + I TR G FKV ++G + + Sbjct: 62 ANVSQQFTQGDINNTGNVLDMGINGSGFFTMSNNGSISYTRAGTFKVDNNGFITNTD 118 Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 35/129 (27%), Gaps = 5/129 (3%) Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 + P D + + + + K I + L S QG + Sbjct: 313 DTARSIPTQDGYATGQITNLTIDGTGTLFANFSNNQSKAIGQVALASFTNEQGLQPIGGT 372 Query: 176 GISPNIPP-----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 G + + V LE+SN N E+ +I + + I Sbjct: 373 GWKETFASGVPGYDAPKTGTLGEVVSNSLEESNVNLTNELVDLIKGQSNYQANAKTISTQ 432 Query: 231 EKSMLEAIR 239 M I+ Sbjct: 433 STIMQTIIQ 441 >gi|330975977|gb|EGH76043.1| flagellar hook protein FlgE [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 581 Score = 89.2 bits (219), Expect = 5e-16, Method: Composition-based stats. Identities = 28/133 (21%), Positives = 55/133 (41%), Gaps = 3/133 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SFN ++ A +RL +N++N T+GF++ + +FS + + + Q Sbjct: 2 SFNTAISGIHAANKRLEVAGNNIANVGTLGFKSSRAQFSALYASAQLGAGQHAVGDGVRL 61 Query: 64 EYLSKEVGSFI---STGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + + S+G LD ++G+ +F + + TR G F +V + G Sbjct: 62 ASVQQNFNQGETVISSGNALDMRIQGNGFFVVSDQGSLAYTRAGAFLKDAANFVVDSDGG 121 Query: 121 YPVLDMASVPIQI 133 A+ +I Sbjct: 122 RLQGYAANDKGEI 134 Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 21/129 (16%), Positives = 40/129 (31%), Gaps = 5/129 (3%) Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 ++S +D S + + G + K I + L S G R ++ Sbjct: 451 TSSRSAAYVDGHSAGELKSLEVGRDGILRAGFTNGMTKSIGQVMLASFANPHGLQPRSDT 510 Query: 176 GISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + E + ++ G LE SN E+ +I + + + I Sbjct: 511 RGTATADSGVAEYDVPGVGTLGSIVSGALEGSNVVLADELIALIQAQTAYQANSKAISTE 570 Query: 231 EKSMLEAIR 239 M I+ Sbjct: 571 VTLMQTLIQ 579 >gi|284801027|ref|YP_003412892.1| flagellar hook protein FlgE [Listeria monocytogenes 08-5578] gi|284994169|ref|YP_003415937.1| flagellar hook protein FlgE [Listeria monocytogenes 08-5923] gi|284056589|gb|ADB67530.1| flagellar hook protein FlgE [Listeria monocytogenes 08-5578] gi|284059636|gb|ADB70575.1| flagellar hook protein FlgE [Listeria monocytogenes 08-5923] Length = 411 Score = 89.2 bits (219), Expect = 5e-16, Method: Composition-based stats. Identities = 34/181 (18%), Positives = 64/181 (35%), Gaps = 13/181 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + ++ A +Q LS ++N++N +T G++ V F++++ + Sbjct: 1 MNQTMYTAISGMNAFQQALSVTSNNIANANTTGYKKQSVVFNDLLYQNTMGSVAGGLYAG 60 Query: 61 SGKEYL-----------SKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107 + GS STG D AL+G +F + I+ TRDG F Sbjct: 61 TNPMSFGSGSKIGAILTDYTAGSPTSTGRNKDAALQGRGFFIAGDNAGGNIVYTRDGSFA 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 V+D+ L + GKY + + + ++ + Sbjct: 121 VSDNNYLTTQQGKYVMGYATDKNGNVLNGNLQPIQIPLNSAIPGEATKNGSLSGNIPLDW 180 Query: 168 G 168 G Sbjct: 181 G 181 Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 17/144 (11%), Positives = 36/144 (25%), Gaps = 5/144 (3%) Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162 + ++ + + P D +A + + + Sbjct: 267 NMSLNLSGLTNYGTNQVFSPTSDGKGAATVKDYAVTDSGYIAVSYSDGTVIPVAQLAVAT 326 Query: 163 VDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLT 217 G V+ N P + + LE SN + E ++ Sbjct: 327 FSNEDGLVKMGNGEYVPGLSSGDAVYGVAGQNGAGGISGSSLEGSNVDLSREFVNLMTYQ 386 Query: 218 QKFNSITTLIDENEKSMLEAIRNI 241 F T +I + M + + I Sbjct: 387 SGFQGNTKVIRVADDVMKQIVNLI 410 >gi|150395503|ref|YP_001325970.1| flagellar hook protein FlgE [Sinorhizobium medicae WSM419] gi|150027018|gb|ABR59135.1| flagellar basal body FlaE domain protein [Sinorhizobium medicae WSM419] Length = 402 Score = 89.2 bits (219), Expect = 5e-16, Method: Composition-based stats. Identities = 41/191 (21%), Positives = 75/191 (39%), Gaps = 4/191 (2%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 G++ A RLSTVA+N++N +T G++ +FS ++ N V + Sbjct: 7 MRTGVSGMNAQSNRLSTVAENIANANTTGYKRASTEFSSMILPSGNGAYNSG-GVQTEVR 65 Query: 65 YLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASGKYPV 123 Y + G+ T + D A++G +F +E + LTR G F +G+LV+A+G + Sbjct: 66 YSISQQGATTFTTSASDLAIDGGGFFIVEGANGQEYLTRAGSFVPDSEGNLVNAAGFTLM 125 Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183 + F+ + ++ KG + A G + M G Sbjct: 126 GYEYEAGVDPTVVVNGFDGLTRVNLASKGLIAA--GSTTGSMGANLPSGAAVGDISTTSL 183 Query: 184 TPLEDLSGVTV 194 + + Sbjct: 184 VVYDSQGNTRI 194 Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats. Identities = 17/138 (12%), Positives = 39/138 (28%), Gaps = 7/138 (5%) Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 K T G +A G + S + + + + L +V Sbjct: 264 KTTQLGYAFNADGGSIDGNAPSKVAGYQIDSDGIVYVKYENGKLDPR--YRIALANVQSP 321 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFN 221 + S + + + + G LE SN + E+ MI + + Sbjct: 322 DKLKPESGNVYSQGVDSGVIITGFAGSGDFGEILSGALESSNVDIAEELTAMIESQRNYT 381 Query: 222 SITTLIDENEKSMLEAIR 239 + + + + + + Sbjct: 382 ANSKVFQTGSELLEVLVN 399 >gi|313905151|ref|ZP_07838520.1| fagellar hook-basal body protein [Eubacterium cellulosolvens 6] gi|313470054|gb|EFR65387.1| fagellar hook-basal body protein [Eubacterium cellulosolvens 6] Length = 247 Score = 89.2 bits (219), Expect = 5e-16, Method: Composition-based stats. Identities = 45/253 (17%), Positives = 86/253 (33%), Gaps = 17/253 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------Q 54 M SF +G +++L V++N++N + GF+ F+E+V N Q Sbjct: 1 MDMSFWVGSIGASQAQRKLDVVSNNLANVNNNGFKPKNAVFAELVNYNLNAGRDETTELQ 60 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI---ILTRDGRFKVTDD 111 + + T LD+A+ D F + LTRDG F Sbjct: 61 AGAGAIVSATNTDFRSAALTQTNRLLDYAIMTDNQFFQVRDQATGAITLTRDGHFHAGQM 120 Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171 G++ ++ + + Q + G + +G+Y+V Sbjct: 121 -----QDGRFVLMTDSDKFVLNTQGQLTYLDVTDGADEGRLAEGQQIGIYTVPFPSRLQN 175 Query: 172 RENSGIS--PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 + P+ + TV G LE S + E MI + F+ ++ Sbjct: 176 VGDDDFRVREGDNNNPITLVELPTVVTGALEQSGTDIAKEFTNMIEAQRAFSYNLRMVQT 235 Query: 230 NEKSMLEAIRNIA 242 +++ + I + Sbjct: 236 SDEVA-QTINGLR 247 >gi|296135673|ref|YP_003642915.1| fagellar hook-basal body protein [Thiomonas intermedia K12] gi|295795795|gb|ADG30585.1| fagellar hook-basal body protein [Thiomonas intermedia K12] Length = 414 Score = 89.2 bits (219), Expect = 5e-16, Method: Composition-based stats. Identities = 28/129 (21%), Positives = 54/129 (41%), Gaps = 4/129 (3%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA----IKNDIDQKIS 57 ++F L+ A L + +N++N +TVGF++ +F++ A Q Sbjct: 1 MSTFQTALSGLQAASTDLQVMGNNIANANTVGFKSSNAQFADSYAAAIAGTSPQYGQVGI 60 Query: 58 FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSA 117 + G+ ST LD A+ G +F + R+G+F++ +G +V A Sbjct: 61 GTSVATVAQQFSQGNIESTSNPLDVAINGSGFFQFNYNGATVYGRNGQFQLDQNGYIVDA 120 Query: 118 SGKYPVLDM 126 +G + Sbjct: 121 AGGQLIGTP 129 Score = 39.9 bits (91), Expect = 0.31, Method: Composition-based stats. Identities = 17/131 (12%), Positives = 40/131 (30%), Gaps = 9/131 (6%) Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRE 173 +V++ + I +F G+ ++ G + T + QG R Sbjct: 287 VVNSLTTDGSSVGQLSNLSIDPSGVVFGRYTNGQSAKLGLITLT----NFKAPQGLQRLG 342 Query: 174 NSGISPN-----IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228 N+ P ++ +E SN + ++ +I Q + + I Sbjct: 343 NNYFVPTYASGQPLTGQPGGGGLGVLQSSAVEQSNVDLSSQLVNLIVAQQAYQANAQTIK 402 Query: 229 ENEKSMLEAIR 239 + + + Sbjct: 403 TQNQVVQTLLS 413 >gi|332531618|ref|ZP_08407515.1| flagellar hook protein FlgE [Hylemonella gracilis ATCC 19624] gi|332038981|gb|EGI75410.1| flagellar hook protein FlgE [Hylemonella gracilis ATCC 19624] Length = 512 Score = 89.2 bits (219), Expect = 5e-16, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 56/156 (35%), Gaps = 3/156 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN--DIDQKISFVAS 61 F GL+ A + L + +N++N +T GF++ + +F +V + V Sbjct: 2 GFQQGLSGLNASSRSLDVIGNNIANANTTGFKSGRAEFGDVFASSIGASGAGTIGIGVEV 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASGK 120 G+ T +LD A+ G +FAL+ +R G FK+ G +V+ +G Sbjct: 62 STVSQQFTQGNIAITNNDLDVAINGSGFFALQLQDGSRAYSRAGEFKLDPLGYVVTNTGA 121 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156 + + + A Sbjct: 122 QVMGFPTDPAGNRTSVTLQPMRMPTSQGIAANQTTA 157 Score = 76.1 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 22/205 (10%), Positives = 52/205 (25%), Gaps = 8/205 (3%) Query: 43 EVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTR 102 ++ A N + +T + + + I L Sbjct: 306 DLTNANNNTALAFADYSVDVGTIDPDGAVGGTTTSSTNASMIINVTLPPSPNVTTIGLNG 365 Query: 103 DGRFKVTDDGSLVSASG---KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG 159 G + G + + D + K E + + + + + Sbjct: 366 TGNISIDLSGIVQHNTRFTAGDLSQDGYPPGDMVGLKIEDNGIITARFSNGETQAFGQLA 425 Query: 160 LYSVDMSQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMI 214 L + QG N ++ G LE+S+ + E+ M+ Sbjct: 426 LANFRNVQGLSPTGNGEWIETQASGQPIFGGPTEGNLGELRSGALEESSVDLTKELVNMM 485 Query: 215 HLTQKFNSITTLIDENEKSMLEAIR 239 + + + I ++ M + Sbjct: 486 TAQRTYQANAQTIKTQDQVMQTLVN 510 >gi|226939374|ref|YP_002794447.1| Flagellar hook protein FlgE [Laribacter hongkongensis HLHK9] gi|226714300|gb|ACO73438.1| Flagellar hook protein FlgE [Laribacter hongkongensis HLHK9] Length = 526 Score = 89.2 bits (219), Expect = 5e-16, Method: Composition-based stats. Identities = 37/169 (21%), Positives = 75/169 (44%), Gaps = 3/169 (1%) Query: 8 GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVASGKEY 65 GL+ A ++L + +N++N+ TVGF+ + +F+++ A + Q V + Sbjct: 6 GLSGINAASKQLDAIGNNVANSSTVGFKGSRAEFADMFAANFYGVAATQNGIGVNTTLIA 65 Query: 66 LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125 G+ +TG +LD A+ G+ +F +++ GI TR+G+F++ +G ++ +G + Sbjct: 66 QQFGQGNITTTGNQLDLAISGNGFFVMQNANGISYTRNGQFQIDREG-YINNNGDKLMGW 124 Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174 P K + S + G S+ + R N Sbjct: 125 QVDDRTTPPSVQNGNLGPLKIDNSLLEPRPSDYGGESMRFNINLDSRNN 173 Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 35/98 (35%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLED 201 + + KVI + L + QG N+ + ++ LED Sbjct: 427 YSNGQTKVIGQVVLANFANQQGLQPIGNNRWMETYNSGNPTLNDPGSTNVGLIQSQALED 486 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ MI + + + I +++ + ++ Sbjct: 487 SNVDLTGELVNMITAQRYYQANAQTIKVHDQVLQSLMQ 524 >gi|262404540|ref|ZP_06081095.1| flagellar hook protein FlgE [Vibrio sp. RC586] gi|262349572|gb|EEY98710.1| flagellar hook protein FlgE [Vibrio sp. RC586] Length = 434 Score = 89.2 bits (219), Expect = 5e-16, Method: Composition-based stats. Identities = 34/207 (16%), Positives = 72/207 (34%), Gaps = 13/207 (6%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGK 63 I L+ A + L+T ++N++N +T GF+ + +F +V N V + K Sbjct: 3 YISLSGLSAAQMDLNTTSNNIANANTFGFKESRAEFGDVYSTSLFTNAKTTPGQGVQAAK 62 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFAL----ESPRGIILTRDGRFKVTDDGSLVSASG 119 GS I T LD + G +FA+ P+ LTR+G F + + +V+A+ Sbjct: 63 VAQQFHEGSSIYTNNPLDLRIAGTGFFAVAKDKMVPQQNELTRNGAFHLDKNSYMVTAND 122 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF-------VRR 172 ++ + + E + + + + ++ + + Sbjct: 123 EFLLGYEVNPDSGDVLSYEPKPINIPPQFGKPKQTANIDLAANLPANGDLKDPALFDITD 182 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFL 199 + + +L Sbjct: 183 PETYNRTTSSTIYDSMGQPYKLTTYYL 209 Score = 66.8 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 16/122 (13%), Positives = 38/122 (31%), Gaps = 5/122 (4%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI- 181 D A+ + + + + + L V QG ++ + Sbjct: 311 DQDGATTGFLTKIDFDENGSVLATYSNGQNTTLGRVALVRVANEQGLDKKGGTQWDATQF 370 Query: 182 ----PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 S +V G LE SN + E+ +I + F + + ++ + + Sbjct: 371 SGDKIWGESNKGSFGSVSNGSLEQSNIDMTQELVDLISAQRNFQANSRALEVHNQLQQNI 430 Query: 238 IR 239 ++ Sbjct: 431 LQ 432 >gi|116626495|ref|YP_828651.1| hypothetical protein Acid_7458 [Candidatus Solibacter usitatus Ellin6076] gi|116229657|gb|ABJ88366.1| protein of unknown function DUF1078 domain protein [Candidatus Solibacter usitatus Ellin6076] Length = 421 Score = 89.2 bits (219), Expect = 5e-16, Method: Composition-based stats. Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 4/130 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---DIDQKIS 57 M TSF+ L+A A + V +N++N +T GF+T V F ++V Q Sbjct: 1 MFTSFSTALSALSATATAVDVVGNNLANLNTPGFKTNVVYFRDLVTQSLGAGLGETQVGF 60 Query: 58 FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVS 116 G+ S+ LD A++GD +F ++ + + TR G F+V D G+L + Sbjct: 61 GTGRPLTIRQFTQGAIQSSTGLLDAAVQGDGFFVAKNAQGNTVYTRAGNFQVDDAGNLKT 120 Query: 117 ASGKYPVLDM 126 +G+ Sbjct: 121 NTGESVQGWT 130 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 17/143 (11%), Positives = 47/143 (32%), Gaps = 10/143 (6%) Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-----SQKGKVIATMGLY 161 + + G ++ G+ +S + + + G++ + V+ + + Sbjct: 276 RTDNGGGRITQFGQPSSASASSQNGSAAAQLIRVGLADGGKMLAQYSDGQQVVVGQVAMA 335 Query: 162 SVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 SV + + N+ + + G +E S + E +I L Sbjct: 336 SVRNPESLIAVGNNNYQASARTATPAIGLPNTGGRGDIVGGAIEASTVDIAKEFTNLIVL 395 Query: 217 TQKFNSITTLIDENEKSMLEAIR 239 + + + + +I ++ E I Sbjct: 396 QRGYQANSRVITTVDELSQETIN 418 >gi|88811801|ref|ZP_01127055.1| flagellar hook protein [Nitrococcus mobilis Nb-231] gi|88791192|gb|EAR22305.1| flagellar hook protein [Nitrococcus mobilis Nb-231] Length = 400 Score = 89.2 bits (219), Expect = 5e-16, Method: Composition-based stats. Identities = 39/192 (20%), Positives = 69/192 (35%), Gaps = 10/192 (5%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV--VGAIKNDIDQKISFVAS 61 SF L A L +N++N+ T GF++ + +F+++ + + V Sbjct: 2 SFETALTGLNAASADLDVTGNNVANSATTGFKSSRAEFADIYALSNVGTAQTSIGQGVRL 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 G F TG LD A+ G +FAL + +R+G F++ DG +V A G Sbjct: 62 AAVTQQFTQGQFDFTGNTLDLAVNGTGFFALNANGTTAYSRNGAFQLDRDGFIVDADGHR 121 Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 A I G G++ +A ++ +S R + + Sbjct: 122 LNGYQAGSNGAI--------SGALGDLQVNIGNVAPQATANIGLSANLDARAATIPTAFD 173 Query: 182 PPTPLEDLSGVT 193 P + Sbjct: 174 AADPATYNFSTS 185 Score = 74.1 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 13/94 (13%), Positives = 33/94 (35%), Gaps = 5/94 (5%) Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNAN 205 + + + + L Q + ++ + + T++ G LE SN N Sbjct: 305 QSQTLGQIALSRFPSPQSLQQIGDTHWAETFASGAPVTAAPGSSGVGTIQGGALEKSNVN 364 Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 ++ MI + F + + +I ++ + Sbjct: 365 LTEQLVHMITAQRNFQANSQMISTQDQITQSILN 398 >gi|83647173|ref|YP_435608.1| flagellar hook protein FlgE [Hahella chejuensis KCTC 2396] gi|83635216|gb|ABC31183.1| Flagellar hook protein FlgE [Hahella chejuensis KCTC 2396] Length = 651 Score = 89.2 bits (219), Expect = 5e-16, Method: Composition-based stats. Identities = 31/173 (17%), Positives = 63/173 (36%), Gaps = 3/173 (1%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASG 62 FNI L A L +N++N T GF+ + +F ++ + V Sbjct: 3 FNIALTGIRAASVDLEVTGNNIANASTTGFKRSRAEFGDLYANSFLSLGTNPVGDGVRVQ 62 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKY 121 K G+ T LD A+ G+ +F L++ +R G F + +G++V++SG + Sbjct: 63 KVRQEFAQGNLSFTENGLDLAINGEGFFILDTNNGDRRYSRAGAFGIDKEGNVVNSSGMH 122 Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174 +A+ + + + + + R ++ Sbjct: 123 LQGFVANDSGVVSGVLGDLVIDDTSLAPDRTTRVDANLNLDASEPVLLERGDS 175 Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 28/207 (13%), Positives = 54/207 (26%), Gaps = 9/207 (4%) Query: 38 KVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG 97 + +S V + + V G+ L+ A G Sbjct: 447 RASYSLVFDQDGSINEVLSDDVLISNWTPLAPDGTPNGAEGPLNVADGGTLPIPDPPTSS 506 Query: 98 IILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157 G V+ + + + + IF GE KV+ Sbjct: 507 NFFVDLGTTTQYGSAFAVNDLQQNGFTTGRLIGLDVDDGGVIFARYTNGE----SKVLGQ 562 Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQ 212 + L + + QG + S T ++ LEDSN + ++ Sbjct: 563 VALANFNDIQGLAPVGETTWVETFNSGNPVIGSPGTASLGAIRSSSLEDSNVDLSEQLVG 622 Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIR 239 +I + + + I+ I Sbjct: 623 LIIAQRNYQANAKTIETANAITQTIIN 649 >gi|237817502|ref|ZP_04596493.1| flagellar hook protein FlgE [Brucella abortus str. 2308 A] gi|237787337|gb|EEP61554.1| flagellar hook protein FlgE [Brucella abortus str. 2308 A] Length = 456 Score = 89.2 bits (219), Expect = 5e-16, Method: Composition-based stats. Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 5/123 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M G++ A RLSTVADN++N TVG++ + +FS +V S V Sbjct: 66 MMR---TGVSGMNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAGQYNSGS-VL 121 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASG 119 + Y + G ST + D A++G+ +F ++ P G TR G F +G LV+++G Sbjct: 122 TDVRYGISDQGGIRSTSSTTDLAIDGNGYFVVQGPGGSTYLTRAGSFVPDKNGDLVNSAG 181 Query: 120 KYP 122 Y Sbjct: 182 YYL 184 Score = 68.4 bits (165), Expect = 9e-10, Method: Composition-based stats. Identities = 10/54 (18%), Positives = 22/54 (40%) Query: 186 LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + + G LE+SNA+ E+ MI + + + + + + M + Sbjct: 400 PQGDGMGKIMSGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGFELMDVLVN 453 >gi|114320057|ref|YP_741740.1| flagellar basal body FlaE domain-containing protein [Alkalilimnicola ehrlichii MLHE-1] gi|114226451|gb|ABI56250.1| flagellar basal body FlaE domain protein [Alkalilimnicola ehrlichii MLHE-1] Length = 430 Score = 88.8 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 34/160 (21%), Positives = 61/160 (38%), Gaps = 2/160 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID--QKISFVAS 61 SF L A + L+ DN++N+ T GF+ + +F+++ + + V Sbjct: 2 SFGTSLTGLNAAQSELNITGDNIANSSTWGFKESRPEFADLFASSNLGVTGLAIGQGVRL 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 G F T LD + G +F L I TR G F++ +G + +++GK Sbjct: 62 QNVGQQFSQGQFDFTENSLDLGISGKGFFRLSDDGDISYTRSGAFQLDREGWITNSAGKR 121 Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLY 161 A I + E G ++ + A + Sbjct: 122 LTGFAADGDGNIVGDGQQELRVETGNVAPEATTEARIQAN 161 Score = 83.4 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 26/215 (12%), Positives = 65/215 (30%), Gaps = 16/215 (7%) Query: 39 VKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98 F + +G I + ++ G ++ G + + + Sbjct: 216 TTFFDSLGRQHTANFYFIKGNDNDWYVHTEVDGEVLNNGQPQPISFGPNGLIEGNATFD- 274 Query: 99 ILTRDGRFKVTDDGSL----VSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-----EIS 149 TR D L ++ G + + + +V E G + Sbjct: 275 -YTRALADAEDLDFELDLESLTQFGTPFAVSDITQDGFAAGEFSSLDVSEDGTIFARFTN 333 Query: 150 QKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNA 204 + +V+ +G+ + ++ + T ++ G LE SN Sbjct: 334 GQSEVLGRVGVTKFPSQENLQPVGDTEWVATFEAGEPVVGTAGTSDFGSIESGALEQSNV 393 Query: 205 NSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + ++ +MI + F++ +I ++ E + Sbjct: 394 DISEQLVKMIVAQRNFSANAKMISTEDQITQEILN 428 >gi|330961197|gb|EGH61457.1| flagellar hook protein FlgE [Pseudomonas syringae pv. maculicola str. ES4326] Length = 582 Score = 88.8 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 3/133 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV--GAIKNDIDQKISFVAS 61 SFN ++ A +RL +N++N T+GF++ + +FS + + + V Sbjct: 2 SFNTAISGIHAANKRLEVAGNNIANVGTLGFKSSRAQFSALYASAQLGAGGNAVGDGVRL 61 Query: 62 GKEYLSKEVGSF-ISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + G IS+G LD ++G+ +F + + TR G F + +V + G Sbjct: 62 ASVQQNFNQGETVISSGNPLDMRIQGNGFFVVSDQGALAYTRAGAFLKDAENFVVDSDGG 121 Query: 121 YPVLDMASVPIQI 133 AS +I Sbjct: 122 RLQGYAASDRGEI 134 Score = 71.8 bits (174), Expect = 7e-11, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 32/99 (32%), Gaps = 5/99 (5%) Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLE 200 G + K I + L S G R ++ + E + ++ G LE Sbjct: 482 GFTNGMTKDIGQVVLASFANPHGLQPRSDTRWTATADSGVAEYDRPGVGTLGSIVSGGLE 541 Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN E+ +I + + + I M I+ Sbjct: 542 GSNVVLADELIALIQAQTAYQANSKAISTEVTLMQTLIQ 580 >gi|28869141|ref|NP_791760.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tomato str. DC3000] gi|28852381|gb|AAO55455.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tomato str. DC3000] Length = 586 Score = 88.8 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 27/134 (20%), Positives = 57/134 (42%), Gaps = 3/134 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG- 62 SFN ++ A +RL +N++N+ T+GF++ + +FS + + + + Sbjct: 2 SFNTAISGINAANKRLEVAGNNIANSGTIGFKSSRAQFSALYSSAQLGSGRNAIGDGVRL 61 Query: 63 --KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + + S ++G LD ++G+ +F + + TR G F +V + G Sbjct: 62 AATQQNFNQGDSMTTSGNPLDMRIQGNGFFVVSDKGSLAYTRAGAFLKDAANFVVDSEGG 121 Query: 121 YPVLDMASVPIQIP 134 A+ +I Sbjct: 122 RLQGYAANDNGEIM 135 Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 34/99 (34%), Gaps = 5/99 (5%) Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLE 200 G + K I + L S QG R ++ + + + + ++ G LE Sbjct: 486 GFTNGMNKNIGQVILASFANPQGLQARSDTRWTESAESGVADYEVPGVGTLGSLVGGALE 545 Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN E+ +I + + + I M I+ Sbjct: 546 GSNVVLADELIALIQAQTAYQANSKAISTEATVMQTLIQ 584 >gi|331005445|ref|ZP_08328824.1| Flagellar hook protein FlgE [gamma proteobacterium IMCC1989] gi|330420721|gb|EGG95008.1| Flagellar hook protein FlgE [gamma proteobacterium IMCC1989] Length = 400 Score = 88.8 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 31/123 (25%), Positives = 51/123 (41%), Gaps = 8/123 (6%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--------DQ 54 ++ L + LSTV++N++N +T GF+ + F ++ + Q Sbjct: 4 STIYTASTGMLTFSKGLSTVSNNVANLNTPGFKRSDLLFRDLFYQFQQSGEMDGQTSAQQ 63 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSL 114 + V S G TG D A+ G+ +F L P + TR G+F+ DG L Sbjct: 64 NGAGVTDAGTITSFAAGDIQQTGNSTDVAISGNGFFILREPDQQMYTRAGQFEFDSDGFL 123 Query: 115 VSA 117 S Sbjct: 124 SST 126 Score = 56.8 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 8/49 (16%), Positives = 21/49 (42%) Query: 191 GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + G +E SN E +I + + F + + ++ + + + E + Sbjct: 347 FGDLVGGSIEISNVELTQEFTDLIIIQRGFQASSQIMSASNEMIQELLS 395 >gi|116250500|ref|YP_766338.1| flagellar hook protein FlgE [Rhizobium leguminosarum bv. viciae 3841] gi|115255148|emb|CAK06222.1| flagellar hook protein (agr_c_1012p) [Rhizobium leguminosarum bv. viciae 3841] Length = 433 Score = 88.8 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 38/163 (23%), Positives = 65/163 (39%), Gaps = 2/163 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 S ++ A RLSTVADN++N +T G++ + FS +V + V + Sbjct: 6 SMKTAVSGMNAQANRLSTVADNIANVNTTGYKAVSTSFSSLVLPSSGG-NYNSGGVQTSV 64 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGKYP 122 + G T + D A+ GD +F ++ G +LTR G F D+G+LV+A+G Sbjct: 65 RQAVSDQGDISYTTSSTDLAISGDGFFIVQGADGTPVLTRAGDFTKDDEGNLVNAAGFQL 124 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 + + + + IA+ Sbjct: 125 MGYSYDAGSPAVVVNGFDGLVPVNVNQEGLTAIASTSGVFKGN 167 Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 16/121 (13%), Positives = 35/121 (28%), Gaps = 1/121 (0%) Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178 + V + + + + + + G V N Sbjct: 311 NGQAASPVKDVTVDGDGIVYAKYEDGSTKPLYRIPLANVASPDKLTLMSGNVYSANGQSG 370 Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 + P + T+K G LE SN + E+ +MI + + + + + M + Sbjct: 371 VTVTGFPQTNG-LGTIKAGALEGSNVDLAGELTEMIESQRSYTANSKVFQTGSDIMDVLV 429 Query: 239 R 239 Sbjct: 430 N 430 >gi|330892783|gb|EGH25444.1| flagellar hook protein FlgE [Pseudomonas syringae pv. mori str. 301020] Length = 280 Score = 88.8 bits (218), Expect = 6e-16, Method: Composition-based stats. Identities = 28/133 (21%), Positives = 58/133 (43%), Gaps = 3/133 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF---VA 60 SFN ++ A +RL +N++N+ T+GF++ + +FS + A + + Sbjct: 2 SFNTAISGIHAANKRLEVAGNNIANSGTIGFKSSRAQFSALYSASQLGSGRNAVGDGVCL 61 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + + + S ++G LD ++G+ +F + + TR G F +V + G Sbjct: 62 ASMQQNFNQGESMTTSGNPLDMRIQGNGFFVVSDGGSLAYTRAGAFLKDAANFVVDSEGG 121 Query: 121 YPVLDMASVPIQI 133 A+ +I Sbjct: 122 RLQGYAANEQGEI 134 >gi|289679027|ref|ZP_06499917.1| flagellar hook protein FlgE [Pseudomonas syringae pv. syringae FF5] Length = 377 Score = 88.8 bits (218), Expect = 6e-16, Method: Composition-based stats. Identities = 28/133 (21%), Positives = 55/133 (41%), Gaps = 3/133 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SFN ++ A +RL +N++N T+GF++ + +FS + + + Q Sbjct: 2 SFNTAISGIHAANKRLEVAGNNIANVGTLGFKSSRAQFSALYASAQLGAGQHAVGDGVRL 61 Query: 64 EYLSKEVGSFI---STGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + + S+G LD ++G+ +F + + TR G F +V + G Sbjct: 62 ASVQQNFNQGETVISSGNALDMRIQGNGFFVVSDQGSLAYTRAGAFLKDAANFVVDSDGG 121 Query: 121 YPVLDMASVPIQI 133 A+ +I Sbjct: 122 RLQGYAANDKGEI 134 >gi|260222467|emb|CBA32060.1| hypothetical protein Csp_D30230 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 188 Score = 88.8 bits (218), Expect = 6e-16, Method: Composition-based stats. Identities = 37/171 (21%), Positives = 67/171 (39%), Gaps = 7/171 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID---QKISFVA 60 SF GL+ + + L + +N++N +TVG + + +F+ ++ V+ Sbjct: 2 SFQTGLSGLNSSSKNLDVIGNNIANANTVGMKASRTEFAALIATQLGPAGGNLTPGIGVS 61 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLVSASG 119 G G+ TG LD A+ G+ +F + P TRDG+FK+ D G+L++ G Sbjct: 62 VGTVAQQFTQGNISITGNNLDVAINGNGFFQVTMPDQSRAYTRDGQFKLDDVGNLITNGG 121 Query: 120 KYPVL---DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 + D+ I + + + A L S Sbjct: 122 ANVMGYPTDLLGNRTSITPEKMVIPTNAPIPAEATTSIAAEFNLDSRTKPA 172 >gi|255023259|ref|ZP_05295245.1| flagellar basal body rod protein FlgG [Listeria monocytogenes FSL J1-208] Length = 251 Score = 88.8 bits (218), Expect = 6e-16, Method: Composition-based stats. Identities = 39/243 (16%), Positives = 84/243 (34%), Gaps = 16/243 (6%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV--------VGAIKNDIDQKISFVAS 61 A + Q + ++N++N T GF+ ++ + G + + V Sbjct: 1 AGMMNYMQHIQVHSNNVANAQTPGFKFDQLTSEVISRNKVNYQNGPVTRQVGTIDYGVRP 60 Query: 62 GKEYLSKEVGSFISTGTELDFALE------GDAWFALESPRGIILTRDGRFKVTDDGSLV 115 +++ GS T + DF ++ G +F I L+R G+F G L Sbjct: 61 AATHINLTAGSSYITNRDRDFFMQDTDPTQGSNFFITAKNGEISLSRGGQFHSDQFGFLR 120 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG--FVRRE 173 +A G + + ++ + + +G V +Q V+ Sbjct: 121 TADGANLLSATGEAIQVGQKTSIRAEANGDLYNAETNQYLGRLGTKFVSANQADSLVKDG 180 Query: 174 NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 + N T ++ G +E SN + EM Q++ + + +++ +K Sbjct: 181 EGRLHVNGINTMNLPAGQGIIQNGVIETSNVDLGVEMVQLMDNQRMVQASKNVVNMFDKV 240 Query: 234 MLE 236 + Sbjct: 241 YDK 243 >gi|220934394|ref|YP_002513293.1| flagellar basal body FlaE domain protein [Thioalkalivibrio sp. HL-EbGR7] gi|219995704|gb|ACL72306.1| flagellar basal body FlaE domain protein [Thioalkalivibrio sp. HL-EbGR7] Length = 408 Score = 88.8 bits (218), Expect = 6e-16, Method: Composition-based stats. Identities = 29/125 (23%), Positives = 51/125 (40%), Gaps = 2/125 (1%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--ISFVASGKE 64 L+ A L +N++N+ T GF+ + +F++V I Q + V Sbjct: 5 TALSGLNAASADLRVTGNNIANSGTTGFKQSRAEFADVFALSYGGISQTAIGTGVRLSAV 64 Query: 65 YLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVL 124 G+ TG LD A+ G +F L + +R G F+V +G +V+ G+ + Sbjct: 65 TQQFSQGNIEFTGNNLDLAMNGQGFFVLNDSGTQVYSRAGAFQVNREGYVVNTQGQRLQV 124 Query: 125 DMASV 129 Sbjct: 125 YTPQN 129 Score = 75.7 bits (184), Expect = 6e-12, Method: Composition-based stats. Identities = 26/211 (12%), Positives = 58/211 (27%), Gaps = 16/211 (7%) Query: 34 FRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE 93 FR + AI ++ + + + G ++ Sbjct: 207 FRNTDTLQWDSYLAIDGNLAGGPLPLEFNSDGTLNTATTTTPLNFGTYALTNGADDLNID 266 Query: 94 SPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK 153 G F V++ + I I +F G+ G+ Sbjct: 267 FDLANATQYGGAFN-------VTSLSQNGFTTGRLNSIDIDPTGVVFARFTNGQSQALGR 319 Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLEDSNANSMY 208 V L + QG + ++ + + + ++ G LE SN + Sbjct: 320 V----ALANFANPQGLQQLGDNAWGESFAAGDVILGEADTGNFGLIQAGGLESSNVDIAE 375 Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 ++ ++I + F + +I + I Sbjct: 376 QLVKLITAQRNFQANAQVITTADAVTQTIIN 406 >gi|46906948|ref|YP_013337.1| flagellar hook protein FlgE [Listeria monocytogenes serotype 4b str. F2365] gi|47091659|ref|ZP_00229455.1| flagellar hook protein FlgE, putative [Listeria monocytogenes str. 4b H7858] gi|217965205|ref|YP_002350883.1| flagellar hook protein [Listeria monocytogenes HCC23] gi|226223328|ref|YP_002757435.1| flagellar hook protein FlgE [Listeria monocytogenes Clip81459] gi|254824023|ref|ZP_05229024.1| flagellar hook protein FlgE [Listeria monocytogenes FSL J1-194] gi|254853099|ref|ZP_05242447.1| flagellar hook protein FlgE [Listeria monocytogenes FSL R2-503] gi|254932023|ref|ZP_05265382.1| flagellar hook protein FlgE [Listeria monocytogenes HPB2262] gi|300764509|ref|ZP_07074502.1| flagellar hook protein FlgE [Listeria monocytogenes FSL N1-017] gi|46880214|gb|AAT03514.1| putative flagellar hook protein FlgE [Listeria monocytogenes serotype 4b str. F2365] gi|47019978|gb|EAL10715.1| flagellar hook protein FlgE, putative [Listeria monocytogenes str. 4b H7858] gi|217334475|gb|ACK40269.1| flagellar hook protein [Listeria monocytogenes HCC23] gi|225875790|emb|CAS04493.1| Putative flagellar hook protein FlgE [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258606448|gb|EEW19056.1| flagellar hook protein FlgE [Listeria monocytogenes FSL R2-503] gi|293583575|gb|EFF95607.1| flagellar hook protein FlgE [Listeria monocytogenes HPB2262] gi|293593251|gb|EFG01012.1| flagellar hook protein FlgE [Listeria monocytogenes FSL J1-194] gi|300514863|gb|EFK41917.1| flagellar hook protein FlgE [Listeria monocytogenes FSL N1-017] gi|307570236|emb|CAR83415.1| flagellar hook protein [Listeria monocytogenes L99] gi|332311122|gb|EGJ24217.1| Flagellar hook protein FlgE [Listeria monocytogenes str. Scott A] Length = 411 Score = 88.8 bits (218), Expect = 6e-16, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 64/181 (35%), Gaps = 13/181 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + ++ A +Q LS ++N++N +T G++ V F++++ + Sbjct: 1 MNQTMYTAISGMNAFQQALSVTSNNIANANTTGYKKQSVVFNDLLYQNTMGSVAGGLYAG 60 Query: 61 SGKEYL-----------SKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107 + GS +TG D AL+G +F + I+ TRDG F Sbjct: 61 TNPMSFGSGSKIGAILTDYTAGSPTATGRNKDAALQGRGFFIAGDNAGGNIVYTRDGSFA 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 V+D+ L + GKY + + + ++ + Sbjct: 121 VSDNNYLTTQQGKYVMGYATDKNGNVLNGNLQPIQIPLNSAIPGEATKNGSLSGNIPLDW 180 Query: 168 G 168 G Sbjct: 181 G 181 Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 17/125 (13%), Positives = 31/125 (24%), Gaps = 5/125 (4%) Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 P D +A + + + G V+ N P + Sbjct: 286 PTSDGKGAATVKDYAVTDSGYIAVSYSDGTVIPVAQLAVATFSNEDGLVKMGNGEYVPGL 345 Query: 182 PPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + LE SN + E ++ F T +I + M + Sbjct: 346 SSGDAVYGVAGQNGAGGISGSSLEGSNVDLSREFVNLMTYQSGFQGNTKVIRVADDVMKQ 405 Query: 237 AIRNI 241 + I Sbjct: 406 IVNLI 410 >gi|290893994|ref|ZP_06556969.1| flagellar hook protein FlgE [Listeria monocytogenes FSL J2-071] gi|290556440|gb|EFD89979.1| flagellar hook protein FlgE [Listeria monocytogenes FSL J2-071] Length = 411 Score = 88.8 bits (218), Expect = 6e-16, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 64/181 (35%), Gaps = 13/181 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + ++ A +Q LS ++N++N +T G++ V F++++ + Sbjct: 1 MNQTMYTAISGMNAFQQALSVTSNNIANANTTGYKKQSVVFNDLLYQNTMGSVAGGLYAG 60 Query: 61 SGKEYL-----------SKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107 + GS +TG D AL+G +F + I+ TRDG F Sbjct: 61 TNPMSFGSGSKIGAILTDYTAGSPTATGRNKDAALQGRGFFIAGDNAGGNIVYTRDGSFA 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 V+D+ L + GKY + + + ++ + Sbjct: 121 VSDNNYLTTQQGKYVMGYATDKNGNVLNGNLQPIQIPLNSAIPGEATKNGSLSGNIPLDW 180 Query: 168 G 168 G Sbjct: 181 G 181 Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 17/125 (13%), Positives = 31/125 (24%), Gaps = 5/125 (4%) Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 P D +A + + + G V+ N P + Sbjct: 286 PTSDGKGAATVKDYAVTDAGYIAVSYSDGTVIPVAQLAVATFSNEDGLVKMGNGEYVPGL 345 Query: 182 PPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + LE SN + E ++ F T +I + M + Sbjct: 346 SSGDAVYGVAGQNGAGGISGSSLEGSNVDLSREFVNLMTYQSGFQGNTKVIRVADDVMKQ 405 Query: 237 AIRNI 241 + I Sbjct: 406 IVNLI 410 >gi|225628428|ref|ZP_03786462.1| flagellar hook protein FlgE [Brucella ceti str. Cudo] gi|225616274|gb|EEH13322.1| flagellar hook protein FlgE [Brucella ceti str. Cudo] Length = 456 Score = 88.8 bits (218), Expect = 6e-16, Method: Composition-based stats. Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 5/123 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M G++ A RLSTVADN++N TVG++ + +FS +V S V Sbjct: 66 MMR---TGVSGMNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAGQYNSGS-VL 121 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASG 119 + Y + G ST + D A++G+ +F ++ P G TR G F +G LV+++G Sbjct: 122 TDVRYGISDQGGIRSTSSTTDLAIDGNGYFVVQGPGGSTYLTRAGSFVPDKNGDLVNSAG 181 Query: 120 KYP 122 Y Sbjct: 182 YYL 184 Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 10/54 (18%), Positives = 22/54 (40%) Query: 186 LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + + G LE+SNA+ E+ MI + + + + + + M + Sbjct: 400 PQGDGMGKIMSGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGSELMDVLVN 453 >gi|297580843|ref|ZP_06942768.1| flagellar hook protein FlgE [Vibrio cholerae RC385] gi|297534669|gb|EFH73505.1| flagellar hook protein FlgE [Vibrio cholerae RC385] Length = 434 Score = 88.8 bits (218), Expect = 6e-16, Method: Composition-based stats. Identities = 32/207 (15%), Positives = 70/207 (33%), Gaps = 13/207 (6%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGK 63 + L+ A + L+T ++N++N +T GF+ + +F +V N V + K Sbjct: 3 YVSLSGLSAAQMDLNTTSNNIANANTFGFKESRAEFGDVYSTSLFTNAKTTPGQGVQAAK 62 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWF----ALESPRGIILTRDGRFKVTDDGSLVSASG 119 GS I T LD + G +F P+ LTR+G F + + +V+A+ Sbjct: 63 VAQQFHEGSSIYTNNPLDLRIAGTGFFAVAKDRLVPQQNELTRNGAFHLDKNSFMVTAND 122 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF-------VRR 172 ++ + + E + + + + ++ + + Sbjct: 123 EFLLGYEVNPDTGDVLSYEPKPINIPPQFGKPKQTANIDLGANLPANGDLKDPALFDITD 182 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFL 199 + + +L Sbjct: 183 PETYNRTTSSTIYDSMGQPYKLTTYYL 209 Score = 65.3 bits (157), Expect = 8e-09, Method: Composition-based stats. Identities = 15/122 (12%), Positives = 36/122 (29%), Gaps = 5/122 (4%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI- 181 D A+ + + + + L V QG ++ + Sbjct: 311 DQDGATTGFLTKIDFDENGSVLATYSNGINTTLGRVALVRVANEQGLDKKGGTQWDATQF 370 Query: 182 ----PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 S ++ G LE SN + E+ +I + F + + ++ + Sbjct: 371 SGAKIWGESNKGSFGSISNGSLEQSNIDMTQELVDLISAQRNFQANSRALEVHNGLQQNI 430 Query: 238 IR 239 ++ Sbjct: 431 LQ 432 >gi|301053310|ref|YP_003791521.1| flagellar basal-body rod protein [Bacillus anthracis CI] gi|300375479|gb|ADK04383.1| flagellar basal-body rod protein [Bacillus cereus biovar anthracis str. CI] Length = 243 Score = 88.8 bits (218), Expect = 6e-16, Method: Composition-based stats. Identities = 42/241 (17%), Positives = 83/241 (34%), Gaps = 15/241 (6%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVK-----FSEVVGAIKN---DIDQKISFVASGKEYLS 67 QR++ ++N++N T GF+ + + +I V +++ Sbjct: 1 MQRINVHSNNVANAQTTGFKAENMTSKVFDVQDTYRRGDGAVTNIGSVDYAVVPAATHVN 60 Query: 68 KEVGSFISTGTELDFALEGDA-----WFALESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ T + DF L+ +F LTRDG F + D L + SG + Sbjct: 61 LVQGNIQMTNSATDFFLDDGTAGTASFFVTSKNNETFLTRDGSFTLNSDRYLQTTSGAFV 120 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV--DMSQGFVRRENSGISPN 180 + + + IA + +V + + ++REN + Sbjct: 121 MGENNERIRIPEGAKVAVQADGTLYDAVTQNNIARLQTKTVGAEANNRLMQRENKSFTLA 180 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 TVK LE+SN + EM ++ + ++ ++ +K + Sbjct: 181 EGNIADLPNGVGTVKNYMLENSNVDMTKEMADLMTDQKMISASQRVMTSFDKIYEKEANE 240 Query: 241 I 241 I Sbjct: 241 I 241 >gi|229524192|ref|ZP_04413597.1| flagellar hook protein FlgE [Vibrio cholerae bv. albensis VL426] gi|229337773|gb|EEO02790.1| flagellar hook protein FlgE [Vibrio cholerae bv. albensis VL426] Length = 434 Score = 88.8 bits (218), Expect = 6e-16, Method: Composition-based stats. Identities = 32/207 (15%), Positives = 70/207 (33%), Gaps = 13/207 (6%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGK 63 + L+ A + L+T ++N++N +T GF+ + +F +V N V + K Sbjct: 3 YVSLSGLSAAQMDLNTTSNNIANANTFGFKESRAEFGDVYSTSLFTNAKTTPGQGVQAAK 62 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWF----ALESPRGIILTRDGRFKVTDDGSLVSASG 119 GS I T LD + G +F P+ LTR+G F + + +V+A+ Sbjct: 63 VAQQFHEGSSIYTNNPLDLRIAGTGFFAVAKDRLVPQQNELTRNGAFHLDKNSFMVTAND 122 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF-------VRR 172 ++ + + E + + + + ++ + + Sbjct: 123 EFLLGYEVNPDTGDVLSYEPKPINIPPQFGKPKQTANIDLGANLPANGDLKDPTLFDITD 182 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFL 199 + + +L Sbjct: 183 PETYNRTTSSTIYDSMGQPYKLTTYYL 209 Score = 65.3 bits (157), Expect = 8e-09, Method: Composition-based stats. Identities = 15/122 (12%), Positives = 36/122 (29%), Gaps = 5/122 (4%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI- 181 D A+ + + + + L V QG ++ + Sbjct: 311 DQDGATTGFLTKIDFDENGSVLATYSNGINTTLGRVALVRVANEQGLDKKGGTQWDATQF 370 Query: 182 ----PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 S ++ G LE SN + E+ +I + F + + ++ + Sbjct: 371 SGAKIWGESNKGSFGSISNGSLEQSNIDMTQELVDLISAQRNFQANSRALEVHNGLQQNI 430 Query: 238 IR 239 ++ Sbjct: 431 LQ 432 >gi|91792664|ref|YP_562315.1| flagellar hook protein FlgE [Shewanella denitrificans OS217] gi|91714666|gb|ABE54592.1| protein of unknown function DUF1078-like protein [Shewanella denitrificans OS217] Length = 455 Score = 88.8 bits (218), Expect = 6e-16, Method: Composition-based stats. Identities = 37/185 (20%), Positives = 70/185 (37%), Gaps = 6/185 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61 SFNI L+ A ++ L+T A+N++N +T+GF+ + +F++V N V + Sbjct: 2 SFNIALSGIAAAQKDLNTTANNIANVNTIGFKESRAEFADVYANSIFSNGKTAVGGGVTT 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI----ILTRDGRFKVTDDGSLVSA 117 + GS T LD A+ G +F + +R G FKV + +V + Sbjct: 62 TQVAQQFSQGSLQFTSNALDLAISGGGFFVTSANIDTSQDQSFSRAGAFKVDSNNYMVDS 121 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177 +G + K + V + ++++ G + + Sbjct: 122 AGNFLQAFPVDETGSSTSVSLTTTKPVKIPDTAGSPVKTSSIGMQMNLNSGDKVLDPAAF 181 Query: 178 SPNIP 182 P Sbjct: 182 DPTDS 186 Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 34/91 (37%), Gaps = 5/91 (5%) Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMY 208 +A + L QG + N+ ++ P + +++ LE SN + Sbjct: 363 PLARVALVRFANEQGLTQVGNTSWKASLDSGPALAGEANSGTFGSIRSSALEQSNVDLTT 422 Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E+ +I + F + + ++ N ++ Sbjct: 423 ELVDLISAQRNFQANSRTLEVNNTLQQTILQ 453 >gi|254785371|ref|YP_003072800.1| flagellar basal body protein FlgE [Teredinibacter turnerae T7901] gi|237685119|gb|ACR12383.1| Flagellar basal body protein FlgE [Teredinibacter turnerae T7901] Length = 813 Score = 88.8 bits (218), Expect = 6e-16, Method: Composition-based stats. Identities = 31/153 (20%), Positives = 59/153 (38%), Gaps = 2/153 (1%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASG 62 FN L+ A L+ +N++N T+GF+ + +F +V + S V Sbjct: 3 FNTALSGIRAASTDLTVTGNNIANASTIGFKRSRAEFGDVFATSVLGAGANAIGSGVQVE 62 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 + + G+ T ELD A+ G+ +F L + +R G F + D G + + G Sbjct: 63 DVAQNFKQGNVAFTQNELDLAINGNGFFVLSDQGTPVYSRAGTFGLDDQGYVTNNVGARL 122 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI 155 A I + + ++ ++ Sbjct: 123 QGFQADSTGNISGISDDILIQTSNLPPRQTTLV 155 Score = 82.6 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 26/206 (12%), Positives = 59/206 (28%), Gaps = 9/206 (4%) Query: 39 VKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98 F+ + + + + G+ + G Sbjct: 610 ASFNVFFNENGTLNELLTEDMLISNWVVLDQQGNPTGAMGPQNVLAGGSIVIPEPPTSSN 669 Query: 99 ILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158 + + V + + + I + IF GE G+ +A + Sbjct: 670 FVIELAGTSQSGTDFSVDDTDQDGYASGRLSGLAIDENGVIFARYTNGE----GQPLAQV 725 Query: 159 GLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQM 213 L QG N+ + + P + + ++ G LE+SN + E+ ++ Sbjct: 726 ALADFTNQQGLQPIGNTMWAESFASGPPNVGTPQSGALGAIQSGALEESNVDLSEELVRL 785 Query: 214 IHLTQKFNSITTLIDENEKSMLEAIR 239 I + F + I+ ++ I Sbjct: 786 IIAQRNFQASAKTIETADQVTQTIIN 811 >gi|315122284|ref|YP_004062773.1| flagellar hook protein FlgE [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495686|gb|ADR52285.1| flagellar hook protein FlgE [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 422 Score = 88.8 bits (218), Expect = 6e-16, Method: Composition-based stats. Identities = 32/162 (19%), Positives = 65/162 (40%), Gaps = 2/162 (1%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 ++ A R+S V+DN++N +T+G++ V FS +V VA ++ Sbjct: 7 MKTAMSGMDAQSNRVSAVSDNIANVNTIGYKRTAVSFSSLVFPPAAGCHTSG-GVAVSEK 65 Query: 65 YLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASGKYPV 123 + GS I T + D A++G+ +F ++ G TR G F++ ++G L + +G Sbjct: 66 DMISSQGSLIHTASNTDLAIQGEGFFVVKDKTGTHYLTRSGNFQINNEGFLQNTAGYVLQ 125 Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 + + + + + + T Sbjct: 126 GYPMRNAFSPLVLNSFQGLETINVRNFEPRAVPTTLGSIPAN 167 Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 11/91 (12%), Positives = 28/91 (30%), Gaps = 5/91 (5%) Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMY 208 + + + +V + + P + V G LE +N + Sbjct: 329 PVYRLAIATVPSENSLKICDGNTYLPTRDSGDISIGYPGNDQRGDVLSGALETANVDIAN 388 Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E+ ++I + + + + + M I Sbjct: 389 ELTELIEAQRNYAANSKVFQTGSDFMDILIS 419 >gi|255521910|ref|ZP_05389147.1| flagellar hook protein FlgE [Listeria monocytogenes FSL J1-175] Length = 411 Score = 88.8 bits (218), Expect = 6e-16, Method: Composition-based stats. Identities = 34/189 (17%), Positives = 66/189 (34%), Gaps = 13/189 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + ++ A +Q LS ++N++N +T G++ V F++++ + Sbjct: 1 MNQTMYTAISGMNAFQQALSVTSNNIANANTTGYKKQSVVFNDLLYQNTMGSVAGGLYAG 60 Query: 61 SGKEYL-----------SKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107 + GS +TG D AL+G +F + I+ TRDG F Sbjct: 61 TNPMSFGSGSKIGAILTDYTAGSPTATGRNKDAALQGRGFFIAGDNAGGNIVYTRDGSFA 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 V+D+ L + GKY + + + ++ + Sbjct: 121 VSDNNYLTTQQGKYVMGYATDKNGNVLNGNLQPIQIPLNSAIPGEATKNGSLSGNIPLDW 180 Query: 168 GFVRRENSG 176 G +S Sbjct: 181 GEKDTISSA 189 Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 17/125 (13%), Positives = 31/125 (24%), Gaps = 5/125 (4%) Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 P D +A + + + G V+ N P + Sbjct: 286 PTSDGKGAATVKDYAVTDSGYIAVSYSDGTVIPVAQLAVATFSNEDGLVKMGNGEYVPGL 345 Query: 182 PPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + LE SN + E ++ F T +I + M + Sbjct: 346 SSGDAVYGVAGQNGAGGISGSSLEGSNVDLSREFVNLMTYQSGFQGNTKVIRVADDVMKQ 405 Query: 237 AIRNI 241 + I Sbjct: 406 IVNLI 410 >gi|261211322|ref|ZP_05925610.1| flagellar hook protein FlgE [Vibrio sp. RC341] gi|260839277|gb|EEX65903.1| flagellar hook protein FlgE [Vibrio sp. RC341] Length = 434 Score = 88.8 bits (218), Expect = 6e-16, Method: Composition-based stats. Identities = 32/207 (15%), Positives = 70/207 (33%), Gaps = 13/207 (6%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGK 63 + L+ A + L+T ++N++N +T GF+ + +F +V N V + K Sbjct: 3 YVSLSGLSAAQMDLNTTSNNIANANTFGFKESRAEFGDVYSTSLFTNAKTTPGQGVQAAK 62 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWF----ALESPRGIILTRDGRFKVTDDGSLVSASG 119 GS I T LD + G +F P+ LTR+G F + + +V+A+ Sbjct: 63 VAQQFHEGSSIYTNNPLDLRIAGTGFFAVAKDRLVPQQNELTRNGAFHLDKNSFMVTAND 122 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF-------VRR 172 ++ + + E + + + + ++ + + Sbjct: 123 EFLLGYEVNPDTGDVLSYEPKPINIPPQFGKPKQTANIELGANLPANGDLKDPALFDITD 182 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFL 199 + + +L Sbjct: 183 PETYNRTTSSTIYDSMGQPYKLTTYYL 209 Score = 65.3 bits (157), Expect = 8e-09, Method: Composition-based stats. Identities = 15/122 (12%), Positives = 36/122 (29%), Gaps = 5/122 (4%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI- 181 D A+ + + + + L V QG ++ + Sbjct: 311 DQDGATTGFLTKIDFDENGSVLATYSNGINTTLGRVALVRVANEQGLDKKGGTQWDATQF 370 Query: 182 ----PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 S ++ G LE SN + E+ +I + F + + ++ + Sbjct: 371 SGAKIWGESNKGSFGSISNGSLEQSNIDMTQELVDLISAQRNFQANSRALEVHNGLQQNI 430 Query: 238 IR 239 ++ Sbjct: 431 LQ 432 >gi|15642196|ref|NP_231828.1| flagellar hook protein FlgE [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121586263|ref|ZP_01676053.1| flagellar hook protein FlgE [Vibrio cholerae 2740-80] gi|121726540|ref|ZP_01679789.1| flagellar hook protein FlgE [Vibrio cholerae V52] gi|147674037|ref|YP_001217714.1| flagellar hook protein FlgE [Vibrio cholerae O395] gi|153213649|ref|ZP_01948922.1| flagellar hook protein FlgE [Vibrio cholerae 1587] gi|153817107|ref|ZP_01969774.1| flagellar hook protein FlgE [Vibrio cholerae NCTC 8457] gi|153820826|ref|ZP_01973493.1| flagellar hook protein FlgE [Vibrio cholerae B33] gi|153825324|ref|ZP_01977991.1| flagellar hook protein FlgE [Vibrio cholerae MZO-2] gi|153829329|ref|ZP_01981996.1| flagellar hook protein FlgE [Vibrio cholerae 623-39] gi|183179565|ref|ZP_02957776.1| flagellar hook protein FlgE [Vibrio cholerae MZO-3] gi|227082321|ref|YP_002810872.1| flagellar hook protein FlgE [Vibrio cholerae M66-2] gi|229507726|ref|ZP_04397231.1| flagellar hook protein FlgE [Vibrio cholerae BX 330286] gi|229512079|ref|ZP_04401558.1| flagellar hook protein FlgE [Vibrio cholerae B33] gi|229513841|ref|ZP_04403303.1| flagellar hook protein FlgE [Vibrio cholerae TMA 21] gi|229519215|ref|ZP_04408658.1| flagellar hook protein FlgE [Vibrio cholerae RC9] gi|229522146|ref|ZP_04411563.1| flagellar hook protein FlgE [Vibrio cholerae TM 11079-80] gi|229528798|ref|ZP_04418188.1| flagellar hook protein FlgE [Vibrio cholerae 12129(1)] gi|229607230|ref|YP_002877878.1| flagellar hook protein FlgE [Vibrio cholerae MJ-1236] gi|254225801|ref|ZP_04919406.1| flagellar hook protein FlgE [Vibrio cholerae V51] gi|254849326|ref|ZP_05238676.1| flagellar hook protein FlgE [Vibrio cholerae MO10] gi|255747104|ref|ZP_05421049.1| flagellar hook protein FlgE [Vibrio cholera CIRS 101] gi|262161352|ref|ZP_06030462.1| flagellar hook protein FlgE [Vibrio cholerae INDRE 91/1] gi|262167777|ref|ZP_06035479.1| flagellar hook protein FlgE [Vibrio cholerae RC27] gi|262191689|ref|ZP_06049865.1| flagellar hook protein FlgE [Vibrio cholerae CT 5369-93] gi|298500425|ref|ZP_07010230.1| flagellar hook protein FlgE [Vibrio cholerae MAK 757] gi|9656753|gb|AAF95342.1| flagellar hook protein FlgE [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121549529|gb|EAX59555.1| flagellar hook protein FlgE [Vibrio cholerae 2740-80] gi|121630993|gb|EAX63372.1| flagellar hook protein FlgE [Vibrio cholerae V52] gi|124115848|gb|EAY34668.1| flagellar hook protein FlgE [Vibrio cholerae 1587] gi|125621707|gb|EAZ50036.1| flagellar hook protein FlgE [Vibrio cholerae V51] gi|126512375|gb|EAZ74969.1| flagellar hook protein FlgE [Vibrio cholerae NCTC 8457] gi|126521618|gb|EAZ78841.1| flagellar hook protein FlgE [Vibrio cholerae B33] gi|146315920|gb|ABQ20459.1| flagellar hook protein FlgE [Vibrio cholerae O395] gi|148875170|gb|EDL73305.1| flagellar hook protein FlgE [Vibrio cholerae 623-39] gi|149741008|gb|EDM55077.1| flagellar hook protein FlgE [Vibrio cholerae MZO-2] gi|183012976|gb|EDT88276.1| flagellar hook protein FlgE [Vibrio cholerae MZO-3] gi|227010209|gb|ACP06421.1| flagellar hook protein FlgE [Vibrio cholerae M66-2] gi|227014093|gb|ACP10303.1| flagellar hook protein FlgE [Vibrio cholerae O395] gi|229332572|gb|EEN98058.1| flagellar hook protein FlgE [Vibrio cholerae 12129(1)] gi|229341071|gb|EEO06076.1| flagellar hook protein FlgE [Vibrio cholerae TM 11079-80] gi|229343904|gb|EEO08879.1| flagellar hook protein FlgE [Vibrio cholerae RC9] gi|229349022|gb|EEO13979.1| flagellar hook protein FlgE [Vibrio cholerae TMA 21] gi|229352044|gb|EEO16985.1| flagellar hook protein FlgE [Vibrio cholerae B33] gi|229355231|gb|EEO20152.1| flagellar hook protein FlgE [Vibrio cholerae BX 330286] gi|229369885|gb|ACQ60308.1| flagellar hook protein FlgE [Vibrio cholerae MJ-1236] gi|254845031|gb|EET23445.1| flagellar hook protein FlgE [Vibrio cholerae MO10] gi|255735506|gb|EET90906.1| flagellar hook protein FlgE [Vibrio cholera CIRS 101] gi|262023842|gb|EEY42541.1| flagellar hook protein FlgE [Vibrio cholerae RC27] gi|262028663|gb|EEY47317.1| flagellar hook protein FlgE [Vibrio cholerae INDRE 91/1] gi|262032428|gb|EEY50990.1| flagellar hook protein FlgE [Vibrio cholerae CT 5369-93] gi|297541118|gb|EFH77172.1| flagellar hook protein FlgE [Vibrio cholerae MAK 757] gi|327484716|gb|AEA79123.1| Flagellar hook protein FlgE [Vibrio cholerae LMA3894-4] Length = 434 Score = 88.8 bits (218), Expect = 6e-16, Method: Composition-based stats. Identities = 32/207 (15%), Positives = 70/207 (33%), Gaps = 13/207 (6%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGK 63 + L+ A + L+T ++N++N +T GF+ + +F +V N V + K Sbjct: 3 YVSLSGLSAAQMDLNTTSNNIANANTFGFKESRAEFGDVYSTSLFTNAKTTPGQGVQAAK 62 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWF----ALESPRGIILTRDGRFKVTDDGSLVSASG 119 GS I T LD + G +F P+ LTR+G F + + +V+A+ Sbjct: 63 VAQQFHEGSSIYTNNPLDLRIAGTGFFAVAKDRLVPQQNELTRNGAFHLDKNSFMVTAND 122 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF-------VRR 172 ++ + + E + + + + ++ + + Sbjct: 123 EFLLGYEVNPDTGDVLSYEPKPINIPPQFGKPKQTANIDLGANLPANGDLKDPALFDITD 182 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFL 199 + + +L Sbjct: 183 PETYNRTTSSTIYDSMGQPYKLTTYYL 209 Score = 65.3 bits (157), Expect = 8e-09, Method: Composition-based stats. Identities = 15/122 (12%), Positives = 36/122 (29%), Gaps = 5/122 (4%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI- 181 D A+ + + + + L V QG ++ + Sbjct: 311 DQDGATTGFLTKIDFDENGSVLATYSNGINTTLGRVALVRVANEQGLDKKGGTQWDATQF 370 Query: 182 ----PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 S ++ G LE SN + E+ +I + F + + ++ + Sbjct: 371 SGAKIWGESNKGSFGSISNGSLEQSNIDMTQELVDLISAQRNFQANSRALEVHNGLQQNI 430 Query: 238 IR 239 ++ Sbjct: 431 LQ 432 >gi|168703389|ref|ZP_02735666.1| hypothetical protein GobsU_27906 [Gemmata obscuriglobus UQM 2246] Length = 430 Score = 88.8 bits (218), Expect = 6e-16, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 62/207 (29%), Gaps = 15/207 (7%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----------- 50 + +G + L + +N++N +T G++ ++ F +VV + Sbjct: 3 LNALFVGSSGLTTNSSALDVIGNNLANINTTGYKDQRMVFRDVVYQTLSSGTSADAGTGG 62 Query: 51 -DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109 + Q V G G+ TG LD L+G +F + + + TR G F V Sbjct: 63 VNPTQVGFGVGVGSIGTQFTQGNLNPTGRSLDVGLQGRGFFVMRNVEDVAYTRAGAFGVD 122 Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGE---ISQKGKVIATMGLYSVDMS 166 G LV + V V G G A + ++D Sbjct: 123 SAGYLVDPGTGFRVQRFGPVGEGGASNAGDPQFQIPGNLDIQIPFGTGAAGIATTNIDYQ 182 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVT 193 G + S Sbjct: 183 GNLSSAMQVGEVATTAIQVYDAQSTAR 209 Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats. Identities = 18/159 (11%), Positives = 41/159 (25%), Gaps = 10/159 (6%) Query: 94 SPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ--- 150 T + ++ G ++ G + Sbjct: 272 PGINTAQTITLNLGTAGLTNGLTQFGGATTASAIGQDGSGFGTLTDVSIDADGIVQGKFT 331 Query: 151 --KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSN 203 + +A + + + G +R N+ ++ ++ G LE SN Sbjct: 332 NGRTINLAQLAVAGFNNEDGLLRSGNNYFRSSVASGEALIGLAGQGGRGSLMGGALESSN 391 Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 + E ++I + F I ++ E I Sbjct: 392 VDIAIEFSRLIVAQRGFQVNARTISSTNDTLQELANIIR 430 >gi|313681188|ref|YP_004058926.1| flagellar hook protein flge [Sulfuricurvum kujiense DSM 16994] gi|313154048|gb|ADR32726.1| flagellar hook protein FlgE [Sulfuricurvum kujiense DSM 16994] Length = 758 Score = 88.8 bits (218), Expect = 6e-16, Method: Composition-based stats. Identities = 28/141 (19%), Positives = 53/141 (37%), Gaps = 14/141 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G+ A + + ++N++N +T+G++ + FS+++ Sbjct: 1 MLRSLFAGVTGLQAHQIAMDVESNNIANVNTIGYKYSRANFSDLLAQTSQIATAPQGDIG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGRF 106 + Q GS +T D A++GD +F + S G +R G F Sbjct: 61 GKNAVQVGLGTTISSVTRIMTQGSIQNTDKNTDVAIQGDGFFIVSSDAGSTYKYSRSGDF 120 Query: 107 KVTDDGSLVSASGKYPVLDMA 127 K G+ V +G + Sbjct: 121 KFDAAGNFVDNNGFVVQGWVR 141 Score = 65.7 bits (158), Expect = 6e-09, Method: Composition-based stats. Identities = 14/128 (10%), Positives = 41/128 (32%), Gaps = 5/128 (3%) Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 ++ D + + + + + +A MG+ ++G V + Sbjct: 627 TSGTSGISQDGFPGGDLVGIRIDQSGTLVGSFSNGRSFGLAQMGMAKFTNNEGLVSDGGN 686 Query: 176 GISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + + T ++ LE SN + + Q+I + + + + I + Sbjct: 687 VYLQSANSGDPIIGTAATAGRGFMQSSSLEASNVDLSKSLTQLIIIQRGYQANGKTITTS 746 Query: 231 EKSMLEAI 238 + + + Sbjct: 747 DTLLETLL 754 >gi|257095359|ref|YP_003169000.1| hypothetical protein CAP2UW1_3821 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047883|gb|ACV37071.1| protein of unknown function DUF1078 domain protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 417 Score = 88.8 bits (218), Expect = 6e-16, Method: Composition-based stats. Identities = 32/138 (23%), Positives = 54/138 (39%), Gaps = 2/138 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN--DIDQKISFVAS 61 SF GL+ A L+ + +N++N TVGF+ F++V + Q V Sbjct: 2 SFQQGLSGLSAAATALNVIGNNVANASTVGFKGANAHFADVFASSLGIVGASQVGIGVGV 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 G+ +T LD AL G +F + I TR+G+F + +G +++ Sbjct: 62 SSIQQQFTQGNLTTTNNGLDLALNGGGFFRMSDDGAITYTRNGQFHIDKEGYVINDLNLR 121 Query: 122 PVLDMASVPIQIPQKDEI 139 A I + Sbjct: 122 LTGYPADALGAISPSSPV 139 Score = 80.3 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 13/98 (13%), Positives = 35/98 (35%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLED 201 + + + + + L + G N+ S + P + + ++ +ED Sbjct: 318 YSNGQTRNLGQVVLATFADPNGLKNLGNNQWSSSSASGPELVAAPGSGSRGVIQSSAIED 377 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ MI + + + I ++ + + Sbjct: 378 SNVDLTKELVDMITAQRNYQANAQTIKTQDQVLQTLVN 415 >gi|121997319|ref|YP_001002106.1| flagellar basal body FlaE domain-containing protein [Halorhodospira halophila SL1] gi|121588724|gb|ABM61304.1| flagellar basal body FlaE domain protein [Halorhodospira halophila SL1] Length = 418 Score = 88.8 bits (218), Expect = 7e-16, Method: Composition-based stats. Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 2/123 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG- 62 SFNI L + + L T ++N++N T GF+ + +F+++ I Q S Sbjct: 2 SFNISLTGINSASKDLETTSNNLANAGTTGFKESRAEFNDLFAMGPMGIPQLAVGQGSRL 61 Query: 63 -KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 GSF T LD +EG +F +E + TR G+F+V DG +V+ +GK Sbjct: 62 ANVGQMFSQGSFDFTERSLDLGIEGRGFFRMEDDGEVSYTRAGQFEVDRDGYIVNNTGKR 121 Query: 122 PVL 124 Sbjct: 122 LTG 124 Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 18/142 (12%), Positives = 36/142 (25%), Gaps = 9/142 (6%) Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162 G V+ + I + I GE + + L S Sbjct: 279 FGEMTQFARPFNVTNVSQDGYAAGEFENINVEGDGTILARYSNGEAQ----AVGQVALTS 334 Query: 163 VDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217 + + V+ G LE SN ++ MI Sbjct: 335 FPSEEKLQSVGETSWQATRDAGDPLIGVPGQGQFGRVENGALEQSNVEVSDQLVNMITAQ 394 Query: 218 QKFNSITTLIDENEKSMLEAIR 239 + F++ ++ ++ E + Sbjct: 395 RNFSANAQMVSTQDQVTQEILN 416 >gi|239815263|ref|YP_002944173.1| hypothetical protein Vapar_2278 [Variovorax paradoxus S110] gi|239801840|gb|ACS18907.1| protein of unknown function DUF1078 domain protein [Variovorax paradoxus S110] Length = 395 Score = 88.8 bits (218), Expect = 7e-16, Method: Composition-based stats. Identities = 38/134 (28%), Positives = 65/134 (48%), Gaps = 9/134 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN--------DI 52 M S +G+ L + L +A+N +N +T GF++ ++F+++ + N + Sbjct: 1 MLESIYVGMTGLLGYSRGLRVIANNTANINTPGFKSSSLQFADMFYSGGNLGGGSTSQNR 60 Query: 53 DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDD 111 DQ +++ LS + G TG +LD A++G FAL+ TR G+FK D Sbjct: 61 DQVGFGLSTAGTSLSFKQGELRQTGNDLDMAVDGQGLFALQDANGKTTYTRAGQFKFDAD 120 Query: 112 GSLVSASGKYPVLD 125 G+LVS V+ Sbjct: 121 GTLVSRVNGEKVMG 134 Score = 59.1 bits (141), Expect = 5e-07, Method: Composition-based stats. Identities = 12/118 (10%), Positives = 30/118 (25%), Gaps = 4/118 (3%) Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183 D + + A + L D ++ Sbjct: 272 QDGIGPGALSGTTFDADGNLTLNYSNGSTVKGARLALARFDSPDAVGSLGDNQFEQLDEN 331 Query: 184 TPL----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + + V G +E SN + E ++ + + + + + +I + E Sbjct: 332 AWHLGVAGEGAFGKVSAGRVEISNVDLSQEFSDLVIMQRGYQASSQIISTANDMLQEL 389 >gi|157738165|ref|YP_001490849.1| flagellar hook protein FlgE [Arcobacter butzleri RM4018] gi|157700019|gb|ABV68179.1| flagellar hook protein FlgE [Arcobacter butzleri RM4018] Length = 723 Score = 88.8 bits (218), Expect = 7e-16, Method: Composition-based stats. Identities = 27/132 (20%), Positives = 54/132 (40%), Gaps = 10/132 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + G++ + + ++N++N +TVG++ ++ F++ + +Q Sbjct: 1 MIGALWTGVSGLASQTTAIDNESNNVANVNTVGYKASRISFADQIYQ-----NQIGKGSY 55 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-----GIILTRDGRFKVTDDGSLV 115 GS TG + D AL+GD +F + + TR G ++ D G+L Sbjct: 56 VQDAEKLFTQGSMKVTGVDYDVALQGDGFFTVINKNTLGTAETFYTRAGNLRMGDSGTLQ 115 Query: 116 SASGKYPVLDMA 127 +A G Sbjct: 116 TADGYEVQGWAM 127 Score = 67.6 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 10/92 (10%), Positives = 29/92 (31%), Gaps = 4/92 (4%) Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPP----TPLEDLSGVTVKRGFLEDSNANSM 207 + + + +QG + N+ + + ++ LE S A+ Sbjct: 629 QYAVGQVSIARFTNNQGLLAVGNNNFQATQESGKAIYSTNNNNTAGMQGKTLELSEADLS 688 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + ++ + F + I ++ + I Sbjct: 689 ESLVNLMVFQRAFEANAKSITTADEMLTTLIN 720 >gi|330953727|gb|EGH53987.1| flagellar basal body rod protein FlgG [Pseudomonas syringae Cit 7] Length = 148 Score = 88.4 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 20/148 (13%), Positives = 51/148 (34%), Gaps = 7/148 (4%) Query: 101 TRDGRFKVTDDGSLVSASGK--YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158 +RDG F + +G +V+A+G P + + + + ++I + Sbjct: 1 SRDGTFHLDANGQIVTANGYALEPAIVVPQNAQTFTVGQDGTVSVTLAGATATPQIIGNI 60 Query: 159 GLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQM 213 G + + + + LE+SN +++ E+ M Sbjct: 61 QTADFINPAGLQAIGGNLYLETGSSGAPQIGTPGLNGLGPTLQNTLENSNVSTVEELVNM 120 Query: 214 IHLTQKFNSITTLIDENEKSMLEAIRNI 241 I + + + +I ++ + +N+ Sbjct: 121 ITTQRAYEMNSKVISTADQMLQNLTQNL 148 >gi|331269322|ref|YP_004395814.1| flagellar basal-body rod protein FlgG [Clostridium botulinum BKT015925] gi|329125872|gb|AEB75817.1| flagellar basal-body rod protein FlgG [Clostridium botulinum BKT015925] Length = 491 Score = 88.4 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 53/160 (33%), Gaps = 35/160 (21%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN------------DI 52 G++ + +L +N++N T GF++ +V+F +++ + Sbjct: 1 MYAGISGMKVNQTKLDVTGNNIANVSTTGFKSSRVRFKDMLSQNMGEAVGPGRNQGGVNG 60 Query: 53 DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP----------------- 95 Q V G T LD A++G +F + Sbjct: 61 KQVGLGVQVAGIDSVMSQGMMQPTSRNLDVAMDGTGYFIVAKGALPESNAGGIAVSESDH 120 Query: 96 ------RGIILTRDGRFKVTDDGSLVSASGKYPVLDMASV 129 + TRDG F + G+L+++ G + + Sbjct: 121 TMSGGAFQVNYTRDGSFTLDHQGNLLTSDGYRVMGYAINE 160 Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 30/98 (30%), Gaps = 13/98 (13%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPL-------------EDLSGVTVKRGFLED 201 + + S +G + + S + +G LE Sbjct: 391 LGQIATASFKNQEGLKKEGKNLFSNTANSGVPTVRSGLGAPKNLDNGDGYGEMLQGMLEM 450 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + + MI T+ F + +I ++ + + I Sbjct: 451 SNVDLAEQFTDMIVTTRAFQASGKMISTGDEILQDIIN 488 >gi|4928060|gb|AAD33398.1|AF129422_1 flagellar hook protein FlgE [Sinorhizobium meliloti] Length = 396 Score = 88.4 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 38/163 (23%), Positives = 70/163 (42%), Gaps = 2/163 (1%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 G++ A RLSTVA+N++N +T G++ +FS ++ N V + Sbjct: 1 MRTGVSGMNAQSNRLSTVAENIANANTTGYKRASTEFSSMILPSGNGSYNSG-GVQTEVR 59 Query: 65 YLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASGKYPV 123 Y + G+ T + D A++G +F +E + LTR G F +G+LV+ASG + Sbjct: 60 YSISQQGATTFTTSASDLAIDGGGFFIVEGANGQEYLTRAGSFVPDSEGNLVNASGFTLM 119 Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 + F+ + ++ G + S+ + Sbjct: 120 GYEYEAGVDPTVVVNGFDGLTRVNLASDGLIATGSTKGSMGAN 162 Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats. Identities = 17/138 (12%), Positives = 39/138 (28%), Gaps = 7/138 (5%) Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 K T G +A G + S + + + + L +V Sbjct: 258 KTTQLGYAFNADGGNIDGNAPSKVAGYQIDSDGIVYVKYENGKLDPR--YRIALANVQSP 315 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFN 221 + S + + + + G LE SN + E+ MI + + Sbjct: 316 DKLKPESGNVYSQGVDSGVIITGFAGSGDFGEILSGALESSNVDIAEELTAMIESQRNYT 375 Query: 222 SITTLIDENEKSMLEAIR 239 + + + + + + Sbjct: 376 ANSKVFQTGSELLEVLVN 393 >gi|170756722|ref|YP_001782271.1| flagellar hook protein flgE [Clostridium botulinum B1 str. Okra] gi|169121934|gb|ACA45770.1| flagellar hook protein flgE [Clostridium botulinum B1 str. Okra] Length = 344 Score = 88.4 bits (217), Expect = 8e-16, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 63/168 (37%), Gaps = 39/168 (23%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50 M S G++ A + +L V +N++N +T F++ ++F +++ + Sbjct: 1 MLRSMYSGISGLKAQQTKLDIVGNNIANANTTAFKSQSIRFQDMLSQNMSSATGPSANLG 60 Query: 51 --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP------------- 95 + Q V Y G+ +TG LD A++G +F + Sbjct: 61 GTNPRQVGLGVQVAGIYTKFTTGNMQTTGRNLDMAVDGPGFFIVGKGDITSQTSIITEST 120 Query: 96 --------------RGIILTRDGRFKVTDDGSLVSASGKYPVLDMASV 129 I TRDG F + D+G+L+++ G + + Sbjct: 121 GDVQAGSIDGKNSTMDISFTRDGSFTLDDEGNLLTSDGFRIMGYAMTD 168 >gi|197122873|ref|YP_002134824.1| hypothetical protein AnaeK_2470 [Anaeromyxobacter sp. K] gi|196172722|gb|ACG73695.1| protein of unknown function DUF1078 domain protein [Anaeromyxobacter sp. K] Length = 428 Score = 88.4 bits (217), Expect = 8e-16, Method: Composition-based stats. Identities = 47/198 (23%), Positives = 72/198 (36%), Gaps = 10/198 (5%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA-IKNDIDQKISFVA 60 T+ + G A LS V DN++N +TVGF++ + F + + + Q Sbjct: 4 LTALSSGTTGLQASSLELSVVGDNIANANTVGFKSGRAAFEDALSQSVIGGTGQIGLGSR 63 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG----IILTRDGRFKVTDDGSLVS 116 G+ STG D AL+G+ +F + TRDG+F V DDG LV+ Sbjct: 64 LAGVQKILTQGALASTGLATDLALQGNGFFVVRGAHAGQTGTFYTRDGQFTVDDDGYLVN 123 Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 G A + + VG + + AT L Q + Sbjct: 124 LEGLRVQGFPADPSGALAGLPDDLLVG-----TASAQPRATTRLTLKANLQADAAVPTAA 178 Query: 177 ISPNIPPTPLEDLSGVTV 194 P P + +TV Sbjct: 179 WDPANPGATSNFSTTMTV 196 Score = 79.5 bits (194), Expect = 4e-13, Method: Composition-based stats. Identities = 22/161 (13%), Positives = 47/161 (29%), Gaps = 9/161 (5%) Query: 83 ALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNV 142 A F+ P T S + G+ +++ + I V Sbjct: 268 AAPQPLDFSFGDPTSAGGTGLAGVTQFSATSASTFIGQDGYGSGQLASVRVGPEGVISGV 327 Query: 143 GEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRG 197 G+ +V+ + + R + + +V G Sbjct: 328 FTNGQ----TRVLGQVAVAGFAAPDQLDRAGGNLLQQTPGSGQPVVGAAGSGGRASVVAG 383 Query: 198 FLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 LE SN + + ++I + F + + I ++ + E I Sbjct: 384 SLEQSNVDLAEQFVRLIAAQRAFQANSKTITTADQLLSELI 424 >gi|209547946|ref|YP_002279863.1| flagellar hook protein FlgE [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209533702|gb|ACI53637.1| protein of unknown function DUF1078 domain protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 433 Score = 88.4 bits (217), Expect = 8e-16, Method: Composition-based stats. Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 2/125 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 S ++ A RLSTVADN++N +T G++ + FS +V + V S Sbjct: 6 SMKTAVSGMNAQANRLSTVADNIANVNTTGYKAVSTSFSSLVLPSSGG-NYNSGGVQSSV 64 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGKYP 122 + G T + D A+ GD +F ++ G +LTR G F D+G+LV+A+G Sbjct: 65 RQAVSDQGDISYTTSGTDLAISGDGFFIVQGADGTPVLTRAGDFTKDDEGNLVNAAGFQL 124 Query: 123 VLDMA 127 + Sbjct: 125 MGYSY 129 Score = 71.4 bits (173), Expect = 9e-11, Method: Composition-based stats. Identities = 17/121 (14%), Positives = 35/121 (28%), Gaps = 1/121 (0%) Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178 + V I + + + + + G V N Sbjct: 311 NGQAATPVKDVTIDGDGIVYAKYEDGSTKPLYRIPLANVASPDKLTLMSGNVYSANGQSG 370 Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 + P + T+K G LE SN + E+ +MI + + + + + M + Sbjct: 371 VTVTGFPQTNG-LGTIKSGALEGSNVDLAGELTEMIESQRSYTANSKVFQTGSDIMDVLV 429 Query: 239 R 239 Sbjct: 430 N 430 >gi|297538896|ref|YP_003674665.1| fagellar hook-basal body protein [Methylotenera sp. 301] gi|297258243|gb|ADI30088.1| fagellar hook-basal body protein [Methylotenera sp. 301] Length = 422 Score = 88.4 bits (217), Expect = 8e-16, Method: Composition-based stats. Identities = 32/133 (24%), Positives = 61/133 (45%), Gaps = 2/133 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SF GL+ A ++L + +N++N +TVGF+ + +F++V + + Sbjct: 2 SFQQGLSGLNAASKQLEVIGNNVANANTVGFKQSRAEFADVFANSLTGGGGTQIGIGTNL 61 Query: 64 EY--LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 G+ ST LD A+ G +F + + + +R+G+FK+ DG +V ++ K+ Sbjct: 62 STVAQQFTQGNVTSTNNSLDIAINGGGFFRMTNNGAVTYSRNGQFKMDKDGYIVDSASKH 121 Query: 122 PVLDMASVPIQIP 134 A I Sbjct: 122 LTGYAADTTGAIQ 134 Score = 73.4 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 12/98 (12%), Positives = 32/98 (32%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLED 201 + + + + + L S G + S + + ++ +ED Sbjct: 323 YSNGQSRALGQVVLSSFANPNGLQSLGGNAWSESSTSGTPLTGVPNTGTLGVLQSSAVED 382 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ MI + + + I ++ + + Sbjct: 383 SNTDLTAELVNMITAQRYYQANAQTIKTQDQVLQTLVN 420 >gi|283782100|ref|YP_003372855.1| flagellar basal body FlaE domain-containing protein [Pirellula staleyi DSM 6068] gi|283440553|gb|ADB18995.1| flagellar basal body FlaE domain protein [Pirellula staleyi DSM 6068] Length = 815 Score = 88.4 bits (217), Expect = 8e-16, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 62/169 (36%), Gaps = 13/169 (7%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK------------N 50 ++ L A E ++ V +N++N+ TVGF+ F+ + Sbjct: 5 SALTTALTGMTAAETQIDVVGNNLANSQTVGFKASDSVFATQFLQTQSLGSGPTSGSGGT 64 Query: 51 DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVT 109 + Q + G+ + D A++G+ +F ++ +G + TR+G+FK Sbjct: 65 NPRQTGLGTRVAEITPDFTQGTIEVSSNPSDLAIQGEGFFIVQDSQGEQVYTRNGQFKTN 124 Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158 D LV+ +G+ + +I + + G + Sbjct: 125 SDNELVTTTGQRVLGFGVDQDFEIQTTELVPLEIPLGSAAVAQATQNVY 173 Score = 56.0 bits (133), Expect = 4e-06, Method: Composition-based stats. Identities = 10/90 (11%), Positives = 31/90 (34%), Gaps = 5/90 (5%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIP-----PTPLEDLSGVTVKRGFLEDSNANSMYE 209 + + L G +R + + + + ++ G +E SN + Sbjct: 723 LGQVRLARFANPAGLEQRGQNLFAQGVNSGLPVEGNPGNDGMGSIISGAVELSNTDIGKN 782 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + ++ T ++ +I ++ + E + Sbjct: 783 LIDLVLATTQYRGNARVITAAQELLDELLN 812 >gi|222834410|gb|EEE72887.1| predicted protein [Populus trichocarpa] Length = 170 Score = 88.4 bits (217), Expect = 8e-16, Method: Composition-based stats. Identities = 31/139 (22%), Positives = 53/139 (38%), Gaps = 14/139 (10%) Query: 19 LSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------------QKISFVASGKEY 65 + +++N++N T GF+ + F E++ Q + V Sbjct: 1 MDVISNNLANVSTTGFKRSRAVFEEMMYQTIRQPGAMSSDQTVLPSGMQIGTGVRPVATE 60 Query: 66 LSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLVSASGKYPVL 124 G+ TG D A+ G+ +F + P G TRDG F+V +G LV++SG Sbjct: 61 RIHTQGNPQQTGNAKDVAIIGNGFFQVTMPDGTTSYTRDGSFQVDQNGQLVTSSGFVINP 120 Query: 125 DMASVPIQIPQKDEIFNVG 143 + + FN Sbjct: 121 AITLPANYTSPRWASFNSP 139 >gi|315636308|ref|ZP_07891558.1| flagellar hook protein FlgE [Arcobacter butzleri JV22] gi|315479397|gb|EFU70080.1| flagellar hook protein FlgE [Arcobacter butzleri JV22] Length = 723 Score = 88.4 bits (217), Expect = 8e-16, Method: Composition-based stats. Identities = 27/132 (20%), Positives = 54/132 (40%), Gaps = 10/132 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + G++ + + ++N++N +TVG++ ++ F++ + +Q Sbjct: 1 MIGALWTGVSGLASQTTAIDNESNNVANVNTVGYKASRISFADQIYQ-----NQIGKGSY 55 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-----GIILTRDGRFKVTDDGSLV 115 GS TG + D AL+GD +F + + TR G ++ D G+L Sbjct: 56 VQDAEKLFTQGSMKVTGVDYDVALQGDGFFTVINKNTLGTAETFYTRAGNLRMGDSGTLQ 115 Query: 116 SASGKYPVLDMA 127 +A G Sbjct: 116 TADGYEVQGWAM 127 Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 10/92 (10%), Positives = 29/92 (31%), Gaps = 4/92 (4%) Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPP----TPLEDLSGVTVKRGFLEDSNANSM 207 + + + +QG + N+ + + ++ LE S A+ Sbjct: 629 QYAVGQVSIARFTNNQGLLAVGNNNFQATQESGKAIYSTNNNNTAGMQGKTLELSEADLS 688 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + ++ + F + I ++ + I Sbjct: 689 ESLVNLMVFQRAFEANAKSITTADEMLTTLIN 720 >gi|237799207|ref|ZP_04587668.1| flagellar hook protein FlgE [Pseudomonas syringae pv. oryzae str. 1_6] gi|237806226|ref|ZP_04592930.1| flagellar hook protein FlgE [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022062|gb|EGI02119.1| flagellar hook protein FlgE [Pseudomonas syringae pv. oryzae str. 1_6] gi|331027339|gb|EGI07394.1| flagellar hook protein FlgE [Pseudomonas syringae pv. oryzae str. 1_6] Length = 582 Score = 88.4 bits (217), Expect = 8e-16, Method: Composition-based stats. Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 3/133 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV--GAIKNDIDQKISFVAS 61 SFN ++ A +RL +N++N T+GF++ + +FS + + N + V Sbjct: 2 SFNTAISGIHAANKRLEVAGNNIANVGTLGFKSSRAQFSALYSSAQLGNGNNAVGDGVRL 61 Query: 62 GKEYLSKEVGSF-ISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + G IS+G LD ++G+ +F + + TR G F +V + G Sbjct: 62 AAVQQNFNQGETVISSGNALDMRIQGNGFFVVSDQGSLAYTRAGAFLKDAANFVVDSDGG 121 Query: 121 YPVLDMASVPIQI 133 A+ +I Sbjct: 122 RLQGYAANDKGEI 134 Score = 71.8 bits (174), Expect = 8e-11, Method: Composition-based stats. Identities = 17/99 (17%), Positives = 32/99 (32%), Gaps = 5/99 (5%) Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLE 200 G + K I + L S G R ++ + + + ++ G LE Sbjct: 482 GFTNGMNKDIGQVMLASFANPHGLQPRSDTRWAATADSGVADYDVPGIGTLGSIISGGLE 541 Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN E+ +I + + + I M I+ Sbjct: 542 GSNVVLADELIALIQAQTAYQANSKAISTEVTLMQTLIQ 580 >gi|229132566|ref|ZP_04261415.1| Flagellar hook protein flgE [Bacillus cereus BDRD-ST196] gi|228650912|gb|EEL06898.1| Flagellar hook protein flgE [Bacillus cereus BDRD-ST196] Length = 407 Score = 88.4 bits (217), Expect = 8e-16, Method: Composition-based stats. Identities = 31/197 (15%), Positives = 65/197 (32%), Gaps = 13/197 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49 M + + A + LS ++N++N TVG++ K F +++ Sbjct: 1 MIKALYTSITGMNATQNALSVTSNNIANAQTVGYKKQKAMFDDLLYNNSIGSKGDDKYAG 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107 + + V G+ TG + A+EG+ +F TR G F Sbjct: 61 TNPKSIGNGVKMSGTVTDYSDGTITLTGGKTQAAMEGNGFFVVGDSKGGNTEFTRKGTFG 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 ++ D + + G+Y A+ I + S G + + G+ ++ Sbjct: 121 ISSDYYITNTEGQYVFAYPANAATGEVDLSGIPGPLQIPMGSAIGGIRTSKGVVGGNIPA 180 Query: 168 GFVRRENSGISPNIPPT 184 + + + Sbjct: 181 DAKQITQELPAYDDAGN 197 Score = 62.6 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 11/93 (11%), Positives = 28/93 (30%), Gaps = 5/93 (5%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYE 209 + + G ++ N + L V+ E +N + E Sbjct: 315 AGQLAVAMFPNEGGLMKNGNGNYTATNTTGILAMGVSGQNGAGKVRGSAQEGANVDLSVE 374 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 ++ + F +I +++ + E + I Sbjct: 375 FVDLMLYQRGFQGNAKVIKISDEVLNEVVNLIR 407 >gi|255305280|ref|ZP_05349452.1| flagellar hook protein [Clostridium difficile ATCC 43255] Length = 331 Score = 88.4 bits (217), Expect = 8e-16, Method: Composition-based stats. Identities = 17/116 (14%), Positives = 41/116 (35%), Gaps = 1/116 (0%) Query: 125 DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP-P 183 + + + V I+ + + Y+ G + P+ Sbjct: 213 GQRTQFVYDIPDNSEVGVVPNPAIATDSGKLQKVQTYAFQNPAGLDAEGGNLFKPSANSG 272 Query: 184 TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 P + + +G +E SN + E +MI ++ F + + +I +++ + E I Sbjct: 273 DPQIAGATGNIIQGAIEASNVDIAEEFTEMIIASRSFQANSKIISTSDEILQEIIN 328 Score = 88.0 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 26/180 (14%), Positives = 55/180 (30%), Gaps = 25/180 (13%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M + G++ A + +L + +N++N T F+ + ++ Sbjct: 1 MIKAMYSGVSGMKANQTKLDVIGNNVANAGTTSFKKSSARITDSFYQTVLYASAPTAALG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 ++ Q G+ T D ++GD + + ++ TRDG F + Sbjct: 61 GTNLGQVGVGSKISSINKDMTQGNVQPTNRPSDLMIDGDGYLPVVRQGTVMYTRDGSFNL 120 Query: 109 T-------------DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI 155 G LV+ G V + + + + + VI Sbjct: 121 DTGFKAAAGPLQGVKGGRLVNGDGYMLVGQIMTGKYDANKGTFTPDAKPAAGWPNEPVVI 180 >gi|320538206|ref|ZP_08038101.1| fagellar hook-basal body protein [Treponema phagedenis F0421] gi|320145023|gb|EFW36744.1| fagellar hook-basal body protein [Treponema phagedenis F0421] Length = 452 Score = 88.4 bits (217), Expect = 9e-16, Method: Composition-based stats. Identities = 27/128 (21%), Positives = 51/128 (39%), Gaps = 12/128 (9%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------------ISFV 59 + R+ + +N++N +T GF+ +V F +++ + + V Sbjct: 1 MQNHQTRMDVIGNNVANVNTTGFKRGRVNFQDLISQQLSGASRPNEEVGGVNPKEVGLGV 60 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119 G+ +TG D A++G+ +F L+ TR G F V DG+LV+ + Sbjct: 61 MVASIDTVHTQGALQTTGINTDIAIQGNGFFILKDGEKSFYTRAGAFGVDRDGTLVNPAN 120 Query: 120 KYPVLDMA 127 V Sbjct: 121 GMRVQGWM 128 Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 20/162 (12%), Positives = 43/162 (26%), Gaps = 5/162 (3%) Query: 83 ALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNV 142 A + I L G + T ++ K D ++ K + + Sbjct: 288 ANPDEGGAPTRHTFNINLGEIGTSRNTITQFAERSTTKAYQQDGYAMGYLENFKIDQSGI 347 Query: 143 GEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRG 197 + + I + L G + + + + G Sbjct: 348 ITGVYSNGASREIGQLALAGFANQGGLEKAGENTYIQSNNSGIANITVSGVMGKGKLIAG 407 Query: 198 FLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 LE SN + + MI + F + I ++ + + Sbjct: 408 TLEMSNVDLTDQFTDMIITQRGFQAGAKTIQTSDTMLETVLN 449 >gi|170758711|ref|YP_001787975.1| flagellar hook protein flgE [Clostridium botulinum A3 str. Loch Maree] gi|169405700|gb|ACA54111.1| flagellar hook protein flgE [Clostridium botulinum A3 str. Loch Maree] Length = 345 Score = 88.4 bits (217), Expect = 9e-16, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 63/168 (37%), Gaps = 39/168 (23%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50 M S G++ A + +L V +N++N +T F++ ++F +++ + Sbjct: 1 MLRSMYSGISGLKAQQTKLDIVGNNIANANTTAFKSQSIRFQDMLSQNMSSATGPSANLG 60 Query: 51 --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP------------- 95 + Q V Y G+ +TG LD A++G +F + Sbjct: 61 GTNPRQVGLGVQVAGIYTKFTTGNMQTTGRNLDMAVDGPGFFIVGKGDITSQTSIITEAT 120 Query: 96 --------------RGIILTRDGRFKVTDDGSLVSASGKYPVLDMASV 129 I TRDG F + D+G+L+++ G + + Sbjct: 121 GDVQAGSIDGKSSTMDISFTRDGSFTLDDEGNLLTSDGFRIMGYAMTD 168 Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats. Identities = 13/98 (13%), Positives = 30/98 (30%), Gaps = 13/98 (13%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIP-------------PTPLEDLSGVTVKRGFLED 201 + + + S G + + + D + G +E Sbjct: 245 LGQVAMASFKNEGGLEKMGKNLYKNSANSGEAIIRTPRGTAEENRNDKGYGDMLNGMIEM 304 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E +MI + F + +I ++ + E + Sbjct: 305 SNVDLAEEFTEMIVANRAFQACGKMITTGDEILQELVN 342 >gi|206974982|ref|ZP_03235897.1| flagellar hook protein FlgE [Bacillus cereus H3081.97] gi|206747001|gb|EDZ58393.1| flagellar hook protein FlgE [Bacillus cereus H3081.97] Length = 407 Score = 88.4 bits (217), Expect = 9e-16, Method: Composition-based stats. Identities = 31/197 (15%), Positives = 64/197 (32%), Gaps = 13/197 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49 M + + A + LS ++N++N TVG++ K F +++ Sbjct: 1 MIKALYTSITGMNATQNALSVTSNNIANAQTVGYKKQKAMFDDLLYNNSIGAKGDDRYAG 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107 + + V G+ TG + A+EG+ +F + TR G F Sbjct: 61 TNPKSIGNGVKMSGTVTDYTDGTITLTGGKTQAAMEGNGFFVVGDSKAGNMEFTRKGTFT 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 ++ D + + G+Y A I + S G + + G+ ++ Sbjct: 121 ISSDYYITNTEGQYVFAYPADPSTGNVDLTGIPGPLQVPMGSAIGGIRTSKGVVGGNIPA 180 Query: 168 GFVRRENSGISPNIPPT 184 + + Sbjct: 181 DAKQITQELPVYDNAGN 197 Score = 65.7 bits (158), Expect = 5e-09, Method: Composition-based stats. Identities = 12/93 (12%), Positives = 29/93 (31%), Gaps = 5/93 (5%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYE 209 + + G ++ N + L V+ G E +N + E Sbjct: 315 AGQLAVAMFPNEGGLMKTGNGNYTATNTTGILAMGVSGQNGAGKVRGGAQEGANVDLSVE 374 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 ++ + F +I +++ + E + I Sbjct: 375 FVDLMLYQRGFQGNAKVIKISDEVLNEVVNLIR 407 >gi|229195966|ref|ZP_04322719.1| Flagellar hook protein flgE [Bacillus cereus m1293] gi|228587525|gb|EEK45590.1| Flagellar hook protein flgE [Bacillus cereus m1293] Length = 407 Score = 88.0 bits (216), Expect = 9e-16, Method: Composition-based stats. Identities = 31/197 (15%), Positives = 64/197 (32%), Gaps = 13/197 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49 M + + A + LS ++N++N TVG++ K F +++ Sbjct: 1 MIKALYTSITGMNATQNALSVTSNNIANAQTVGYKKQKAMFDDLLYNNSIGAKGDDRYAG 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107 + + V G+ TG + A+EG+ +F + TR G F Sbjct: 61 TNPKSIGNGVKMSGTVTDYTDGTITLTGGKTQAAMEGNGFFVVGDSKAGNMEFTRKGTFT 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 ++ D + + G+Y A I + S G + + G+ ++ Sbjct: 121 ISSDYYITNTEGQYVFAYPADPSTGNVDLTGIPGPLQVPMGSAIGGIRTSKGVVGGNIPA 180 Query: 168 GFVRRENSGISPNIPPT 184 + + Sbjct: 181 DAKQITQELPVYDNAGN 197 Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 11/93 (11%), Positives = 28/93 (30%), Gaps = 5/93 (5%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYE 209 + + G ++ N + L V+ E +N + E Sbjct: 315 AGQLAVAMFPNEGGLMKTGNGNYTATNTTGILAMGVSGQNGAGKVRGSAQEGANVDLSVE 374 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 ++ + F +I +++ + E + I Sbjct: 375 FVDLMLYQRGFQGNAKVIKISDEVLNEVVNLIR 407 >gi|83814503|ref|YP_446705.1| flagellar biosynthesis cell-distal portion of basal-body rod [Salinibacter ruber DSM 13855] gi|294508641|ref|YP_003572700.1| flagellar hook protein FlgE [Salinibacter ruber M8] gi|83755897|gb|ABC44010.1| flagellar biosynthesis cell-distal portion of basal-body rod [Salinibacter ruber DSM 13855] gi|294344970|emb|CBH25748.1| Flagellar hook protein FlgE [Salinibacter ruber M8] Length = 432 Score = 88.0 bits (216), Expect = 9e-16, Method: Composition-based stats. Identities = 36/145 (24%), Positives = 58/145 (40%), Gaps = 16/145 (11%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55 S +IG++ + + RL TV++N++N+ T F+ + FSE +G + + Sbjct: 3 LQSLSIGVSGLRSHQTRLDTVSNNIANSSTTAFKRQRAAFSEELGQAILGVGRTAGGSNI 62 Query: 56 -----ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP-----RGIILTRDGR 105 V+ + GS TG + D AL GD +F LTR G Sbjct: 63 NPSKVGRGVSVASIDRNFSQGSLNDTGIKTDLALNGDGFFVASPKSGAASDQRRLTRAGN 122 Query: 106 FKVTDDGSLVSASGKYPVLDMASVP 130 F +G LV+A+G Sbjct: 123 FTFNQNGELVTANGLNVQGWEVGED 147 Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 12/89 (13%), Positives = 34/89 (38%), Gaps = 5/89 (5%) Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEM 210 + + V+ G ++ + + L+ +V G LE SN + E Sbjct: 341 YQLAIGDVNNPNGLEQQGENFFTTTGASGDLQLGRAGRDLQTSVVSGALESSNVDLAKEF 400 Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +I + + + + +I ++ + + ++ Sbjct: 401 SDLIKAQRSYQASSQIITTADEVLNQTVQ 429 >gi|332701537|ref|ZP_08421625.1| flagellar hook-basal body protein [Desulfovibrio africanus str. Walvis Bay] gi|332551686|gb|EGJ48730.1| flagellar hook-basal body protein [Desulfovibrio africanus str. Walvis Bay] Length = 532 Score = 88.0 bits (216), Expect = 9e-16, Method: Composition-based stats. Identities = 24/128 (18%), Positives = 48/128 (37%), Gaps = 5/128 (3%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG---AIKNDIDQKISFV 59 S ++ + + +S + +N++N +T+GF++ V F ++ + + DQ Sbjct: 5 NSMWTAISGLTSHSESMSVIGNNLANANTLGFKSGTVHFEDMFYSQLSTASGFDQVGHGS 64 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR--GIILTRDGRFKVTDDGSLVSA 117 Y + G ++ AL G F + + TR G F +G L Sbjct: 65 RVSTIYTNYTQGPHEASSESTHVALGGKGMFVVTNKTSGSTYYTRAGNFTFNQNGYLTDP 124 Query: 118 SGKYPVLD 125 +G Sbjct: 125 NGYVVQGW 132 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 18/123 (14%), Positives = 35/123 (28%), Gaps = 5/123 (4%) Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 D + V + + + + + D QG + + S Sbjct: 406 QTQDGYAPGFLQDISVNDDGVVSGQYSNGQIIDLFVLAVADFDNYQGLKQEGGNLFSETT 465 Query: 182 PPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + LE SN + EM ++I + + F + +I + M E Sbjct: 466 ESGMARTGTANVGGRGDIASATLEQSNVDMSTEMVRLITIQRGFQANGKVITTTDTLMGE 525 Query: 237 AIR 239 I Sbjct: 526 VIN 528 >gi|329898289|ref|ZP_08272372.1| Flagellar hook protein flgE [gamma proteobacterium IMCC3088] gi|328920854|gb|EGG28297.1| Flagellar hook protein flgE [gamma proteobacterium IMCC3088] Length = 975 Score = 88.0 bits (216), Expect = 9e-16, Method: Composition-based stats. Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 3/120 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG--AIKNDIDQKISFVAS 61 SF L A LS ++N++N+ T GF+ F ++ ++ VA Sbjct: 2 SFYTSLTGLNAATTELSVTSNNIANSATAGFKRSSASFGDIFATSPLQRASAVVGQGVAL 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLVSASGK 120 + G + LD A+ GD +F L+S G TR+G F + + +V+++G+ Sbjct: 62 KEISQEFSQGFVQFSSNSLDLAITGDGFFPLQSSDGSRVYTRNGSFMLNEQNQMVNSAGQ 121 Score = 74.1 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 22/132 (16%), Positives = 42/132 (31%), Gaps = 9/132 (6%) Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172 V + + + V + I + + G GK+I L + +G + Sbjct: 845 FAVLSQSQNGAPEGDLVGVNIGEDGLVVASYSNGSQKSLGKII----LANFATPKGLRQV 900 Query: 173 ENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 NSG + T++ G E SN + E+ +I + F + I Sbjct: 901 GNSGFVASSESGEARQGEPGSAGFGTIRAGATERSNVDLTAELVNLITAQRNFQANAKAI 960 Query: 228 DENEKSMLEAIR 239 + + I Sbjct: 961 ETSSTLTSTIIN 972 >gi|42780846|ref|NP_978093.1| flagellar hook protein FlgE [Bacillus cereus ATCC 10987] gi|42736766|gb|AAS40701.1| flagellar hook protein FlgE, putative [Bacillus cereus ATCC 10987] Length = 407 Score = 88.0 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 31/197 (15%), Positives = 64/197 (32%), Gaps = 13/197 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49 M + + A + LS ++N++N TVG++ K F +++ Sbjct: 1 MIKALYTSITGMNATQNALSVTSNNIANAQTVGYKKQKAMFDDLLYNNSIGAKGDDRYAG 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107 + + V G+ TG + A+EG+ +F + TR G F Sbjct: 61 TNPKSIGNGVKMSGTVTDYTDGTITLTGGKTQAAMEGNGFFVVGDSKAGNMEFTRKGTFT 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 ++ D + + G+Y A I + S G + + G+ ++ Sbjct: 121 ISSDYYITNTEGQYVFAYPADPSTGNVDLSGIPGPLQVPMGSAIGGIRTSKGVVGGNIPA 180 Query: 168 GFVRRENSGISPNIPPT 184 + + Sbjct: 181 DAKQITQELPVYDNAGN 197 Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 11/93 (11%), Positives = 28/93 (30%), Gaps = 5/93 (5%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYE 209 + + G ++ N + L V+ E +N + E Sbjct: 315 AGQLAVAMFPNEGGLMKTGNGNYTATNTTGILAMGVSGQNGAGKVRGSAQEGANVDLSVE 374 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 ++ + F +I +++ + E + I Sbjct: 375 FVDLMLYQRGFQGNAKVIKISDEVLNEVVNLIR 407 >gi|220917665|ref|YP_002492969.1| protein of unknown function DUF1078 domain protein [Anaeromyxobacter dehalogenans 2CP-1] gi|219955519|gb|ACL65903.1| protein of unknown function DUF1078 domain protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 428 Score = 88.0 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 47/198 (23%), Positives = 72/198 (36%), Gaps = 10/198 (5%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA-IKNDIDQKISFVA 60 T+ + G A LS V DN++N +TVGF++ + F + + + Q Sbjct: 4 LTALSSGTTGLQASSLELSVVGDNIANANTVGFKSGRAAFEDALSQSVIGGTGQIGLGSR 63 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG----IILTRDGRFKVTDDGSLVS 116 G+ STG D AL+G+ +F + TRDG+F V DDG LV+ Sbjct: 64 LAGVQKILTQGALASTGLATDLALQGNGFFVVRGAHAGQTGTFYTRDGQFTVDDDGYLVN 123 Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 G A + + VG + + AT L Q + Sbjct: 124 LEGLRVQGFPADPSGALAGLPDDLLVG-----TASAQPRATTRLTLKANLQADAAVPTAA 178 Query: 177 ISPNIPPTPLEDLSGVTV 194 P P + +TV Sbjct: 179 WDPANPGATSNFSTTMTV 196 Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats. Identities = 15/128 (11%), Positives = 40/128 (31%), Gaps = 5/128 (3%) Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 +++ + D + V + + +V+ + + R + Sbjct: 297 TSASTFIGQDGYGSGQLASVRVGPEGVISGVFTNGQTRVLGQVAVAGFAAPDQLDRAGGN 356 Query: 176 GISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + + + V G LE SN + + ++I + F + + I Sbjct: 357 LLQQTPGSGQPVVGAAGSGGRASVVAGSLEQSNVDLAEQFVRLIAAQRAFQANSKTITTA 416 Query: 231 EKSMLEAI 238 ++ + E I Sbjct: 417 DQLLSELI 424 >gi|328545491|ref|YP_004305600.1| flagellar basal body FlaE [polymorphum gilvum SL003B-26A1] gi|326415232|gb|ADZ72295.1| Flagellar basal body FlaE [Polymorphum gilvum SL003B-26A1] Length = 424 Score = 88.0 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 33/132 (25%), Positives = 58/132 (43%), Gaps = 2/132 (1%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 G++ A +L TVADN++N+ T G++ +FS ++ + V + Sbjct: 7 MRTGVSGMNAQSSKLGTVADNIANSSTTGYKRAASEFSSMILSQGTGTYNSG-GVKAHTV 65 Query: 65 YLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYPV 123 Y + G+ T + LD A++G+ +F + + LTR G F V G LV+ +G Y Sbjct: 66 YAISQQGAISYTTSGLDLAIDGNGFFVVADREGSTALTRAGSFVVDSKGYLVNTAGYYLQ 125 Query: 124 LDMASVPIQIPQ 135 + Sbjct: 126 GYPIGNGGTVAP 137 Score = 67.6 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 12/73 (16%), Positives = 26/73 (35%), Gaps = 1/73 (1%) Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 G + ++ P E ++ G LE SN + E+ MI + + + + + Sbjct: 350 SGNIYTVSNNSGEVRVGFPGE-GGLGSLTVGALESSNVDLASELTSMIESQRGYTANSKV 408 Query: 227 IDENEKSMLEAIR 239 + E + Sbjct: 409 FKAGSDLLEELVN 421 >gi|307318929|ref|ZP_07598360.1| fagellar hook-basal body protein [Sinorhizobium meliloti AK83] gi|306895343|gb|EFN26098.1| fagellar hook-basal body protein [Sinorhizobium meliloti AK83] Length = 402 Score = 88.0 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 37/163 (22%), Positives = 70/163 (42%), Gaps = 2/163 (1%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 G++ A RLSTVA+N++N +T G++ +FS ++ N V + Sbjct: 7 MRTGVSGMNAQSNRLSTVAENIANANTTGYKRASTEFSSMILPSGNGSYNSG-GVQTEVR 65 Query: 65 YLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASGKYPV 123 Y + G+ T + D A++G +F +E + LTR G F +G+LV+A+G + Sbjct: 66 YSISQQGATTFTTSASDLAIDGGGFFIVEGANGQEYLTRAGSFVPDSEGNLVNAAGFTLM 125 Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 + F+ + ++ G + S+ + Sbjct: 126 GYEYEAGVDPTVVVNGFDGLTRVNLASDGLIATGSTKGSMGAN 168 Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats. Identities = 17/138 (12%), Positives = 39/138 (28%), Gaps = 7/138 (5%) Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 K T G +A G + S + + + + L +V Sbjct: 264 KTTQLGYAFNADGGNIDGNAPSKVAGYQIDSDGIVYVKYENGKLDPR--YRIALANVQSP 321 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFN 221 + S + + + + G LE SN + E+ MI + + Sbjct: 322 DKLRPESGNVYSQGVDSGVIITGFAGSGDFGEILSGALESSNVDIAEELTAMIESQRNYT 381 Query: 222 SITTLIDENEKSMLEAIR 239 + + + + + + Sbjct: 382 ANSKVFQTGSELLEVLVN 399 >gi|149675698|dbj|BAF64728.1| flagellar hook protein [Shewanella livingstonensis] Length = 459 Score = 88.0 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 5/126 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61 S NI L+ A ++ L+T A+N++N +T+GF+ + +F++V N + Sbjct: 2 SLNIALSGIAAAQKDLNTTANNIANVNTIGFKESRAEFADVYADSIFSNSKTAVGGGATT 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESP---RGIILTRDGRFKVTDDGSLVSAS 118 + GS T LD A+ G +F S + TR G FKV +V ++ Sbjct: 62 TQVAQQFHQGSLQFTSNSLDMAISGGGFFVTSSELGSQDQSYTRAGAFKVDSSNYMVDSA 121 Query: 119 GKYPVL 124 G + Sbjct: 122 GNFLQG 127 Score = 65.7 bits (158), Expect = 6e-09, Method: Composition-based stats. Identities = 12/91 (13%), Positives = 33/91 (36%), Gaps = 5/91 (5%) Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMY 208 ++ + L QG + N+ ++ + +++ LE SN + Sbjct: 367 PLSRVALVRFANEQGLTQVGNTSWKASLDSGAALAGEANSGTFGSIRSSALEQSNVDLTT 426 Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E+ +I + F + + ++ N ++ Sbjct: 427 ELVDLISAQRNFQANSRTLEVNNTLNQTILQ 457 >gi|56460252|ref|YP_155533.1| flagellar hook protein FlgE [Idiomarina loihiensis L2TR] gi|56179262|gb|AAV81984.1| Flagellar hook protein FlgE [Idiomarina loihiensis L2TR] Length = 449 Score = 88.0 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 42/195 (21%), Positives = 69/195 (35%), Gaps = 5/195 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--ISFVAS 61 SF I L+ A ++ L A+N+SN T GF+ + +F++V + V + Sbjct: 2 SFKIALSGINASQKDLDVTANNISNVKTSGFKQSRAEFADVYATSIFNAGNTKVGDGVLT 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESP---RGIILTRDGRFKVTDDGSLVSAS 118 G+ T LD A+ G+ +FA R + TR G FK+ DD +V Sbjct: 62 SSVAQQFSQGTLEFTENSLDMAISGNGFFATTDGLGSRDMTYTRSGAFKLNDDKFIVDNQ 121 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178 G Y + G +T +++ + + Sbjct: 122 GNYLQGYQVDRNSGTNSSVALATTQPIRIPDVAGAPQSTDNVFTAFNVDARRSPIDGAAN 181 Query: 179 PNIPPTPLEDLSGVT 193 P P TP S + Sbjct: 182 PFDPETPSTYQSSTS 196 Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats. Identities = 28/216 (12%), Positives = 61/216 (28%), Gaps = 19/216 (8%) Query: 29 TDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA 88 G+ ++V+F + VA+G+ + D L A Sbjct: 246 ASVNGYAGLRVEF----------LGSGDPDVAAGQNTFDPGSIDLSGNNVDGDPYLNNGA 295 Query: 89 WFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI 148 LT V+A + + I + I G++ Sbjct: 296 DAQTIQFNFQDLTGTTTPTQFASDFEVTALDQDGSTVGRLTNVDIDKSGLIAATYSNGDV 355 Query: 149 SQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSN 203 + + + QG + + +I + ++ LE+SN Sbjct: 356 QY----LGQVAIVRFANEQGLTQIGGTKWRESIDSGEPLSGEANTGTFGGIEASALENSN 411 Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 N E+ +I + F + + ++ N ++ Sbjct: 412 VNLTKELVDLITAQRNFQANSRSLEVNNTINQTILQ 447 >gi|227820875|ref|YP_002824845.1| flagellar hook protein FlgE [Sinorhizobium fredii NGR234] gi|227339874|gb|ACP24092.1| putative flagellar hook protein FlgE [Sinorhizobium fredii NGR234] Length = 404 Score = 88.0 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 40/191 (20%), Positives = 73/191 (38%), Gaps = 4/191 (2%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 G++ A RLSTVA+N++N+ T G++ +FS ++ N V + Sbjct: 7 MRTGVSGMNAQANRLSTVAENIANSSTTGYKRASTEFSSMILPSSNGSYNSG-GVETSVR 65 Query: 65 YLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASGKYPV 123 Y + GS T + D A++GD +F ++ + LTR G F D G+LV+A+G + Sbjct: 66 YSISDQGSTTYTTSASDLAIDGDGFFIVQGANGQEYLTRAGAFVQDDSGNLVNAAGFTLM 125 Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183 + + E++ + G + M +G Sbjct: 126 GYEYEAG--VDPTVVVNGFDGLTEVNLASDGLTAAGSTAGAMGANLPSGAANGDVSTTSL 183 Query: 184 TPLEDLSGVTV 194 + + Sbjct: 184 VVYDTQGNTRI 194 Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 17/138 (12%), Positives = 41/138 (29%), Gaps = 7/138 (5%) Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 + T G+ + G + S + + + + + L SV Sbjct: 266 ETTQLGTSFTPDGGSIDGNAPSKVSGYQIDTDGVVYIKYANGELEPR--YRIALASVQSP 323 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFN 221 V + S + + + + G LE SN + E+ MI + + Sbjct: 324 DKLVPESGNVYSQGVDSGVIVTGFAGSGSFGEILSGALESSNVDIADELTSMIESQRNYT 383 Query: 222 SITTLIDENEKSMLEAIR 239 + + + + + + Sbjct: 384 ANSKVFQTGSELLEVLVN 401 >gi|148380612|ref|YP_001255153.1| flagellar hook protein flgE [Clostridium botulinum A str. ATCC 3502] gi|153934204|ref|YP_001384898.1| flagellar hook protein flgE [Clostridium botulinum A str. ATCC 19397] gi|153936013|ref|YP_001388367.1| flagellar hook protein flgE [Clostridium botulinum A str. Hall] gi|148290096|emb|CAL84215.1| flagellar hook protein [Clostridium botulinum A str. ATCC 3502] gi|152930248|gb|ABS35748.1| flagellar hook protein flgE [Clostridium botulinum A str. ATCC 19397] gi|152931927|gb|ABS37426.1| flagellar hook protein flgE [Clostridium botulinum A str. Hall] Length = 345 Score = 88.0 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 63/168 (37%), Gaps = 39/168 (23%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50 M S G++ A + +L V +N++N +T F++ ++F +++ + Sbjct: 1 MLRSMYSGISGLKAQQTKLDIVGNNIANANTTAFKSQSIRFQDMLSQNMSSATGPSANLG 60 Query: 51 --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP------------- 95 + Q V + G+ +TG LD A++G +F + Sbjct: 61 GTNPRQVGLGVQVAGIFTKFTTGNMQTTGRNLDMAVDGPGFFIVGKGDITSQTSIITEGT 120 Query: 96 --------------RGIILTRDGRFKVTDDGSLVSASGKYPVLDMASV 129 I TRDG F + D+G+L+++ G + + Sbjct: 121 DDAQAGSIDGKSSTMDISFTRDGSFTLDDEGNLLTSDGFRIMGYAMTD 168 Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats. Identities = 13/98 (13%), Positives = 30/98 (30%), Gaps = 13/98 (13%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIP-------------PTPLEDLSGVTVKRGFLED 201 + + + S G + + + D + G +E Sbjct: 245 LGQVAMASFKNEGGLEKMGKNLYKNSANSGEAIIRTPRGTAEENRNDKGYGDMLNGMIEM 304 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E +MI + F + +I ++ + E + Sbjct: 305 SNVDLAEEFTEMIVANRAFQACGKMITTGDEILQELVN 342 >gi|119477953|ref|ZP_01618053.1| flagellar hook protein [marine gamma proteobacterium HTCC2143] gi|119448866|gb|EAW30108.1| flagellar hook protein [marine gamma proteobacterium HTCC2143] Length = 429 Score = 88.0 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 31/149 (20%), Positives = 59/149 (39%), Gaps = 2/149 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG-AIKNDIDQKISFVASG 62 SFN L+ A L +N++N T+GF+ + +F +V ++ + + S V Sbjct: 2 SFNTALSGLRAANTDLEVSGNNIANASTIGFKRSRAEFGDVYANSLVSGSNTTGSGVLVN 61 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKY 121 + G+ T LD A+ G +F + TR G F + D+G + + SG Sbjct: 62 SISQQFDQGNISFTDNSLDLAINGTGFFVVAESSGATAYTRAGYFGIDDEGYITNNSGST 121 Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQ 150 + + + G+++ Sbjct: 122 LQGFLPTGTGSGVGGTPADLRVQSGDLAP 150 Score = 76.1 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 13/91 (14%), Positives = 32/91 (35%), Gaps = 5/91 (5%) Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMY 208 ++ + + QG +G + + + ++ G LE+SN + Sbjct: 337 ILGQVAMALFSNEQGLNPLGETGWAQSFESGEPVVGAPLTGNLGGIQSGALEESNVDLSE 396 Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E+ ++I + F + I+ + I Sbjct: 397 ELVRLIIAQRNFQANAKTIETADTVTQAIIN 427 >gi|218886713|ref|YP_002436034.1| hypothetical protein DvMF_1618 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218757667|gb|ACL08566.1| protein of unknown function DUF1078 domain protein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 525 Score = 88.0 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 36/188 (19%), Positives = 75/188 (39%), Gaps = 8/188 (4%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA---IKNDIDQKISFV 59 +S ++ L+ + +S + +N++N+ T G++++ + F +V + IDQ + Sbjct: 5 SSMYASVSGLLSTAESISVIGNNLANSSTTGYKSMSMLFEDVFYSSITTSGGIDQIGNGS 64 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR---GIILTRDGRFKVTDDGSLVS 116 A GS+ T ++ A+ G+ +F +E P+ I TR G F +G LV+ Sbjct: 65 AISAISTDFSQGSYQDTSEAMNMAIAGEGYFIVEDPQNDGQIYYTRAGDFTFNTEGYLVN 124 Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 +SG + G G++ K + +V ++ + Sbjct: 125 SSGYQVQGWAVDPDT--ASSTDPSTTGALGDVQLKSRTSPASATTNVTLTVNLDSGGDDN 182 Query: 177 ISPNIPPT 184 + P Sbjct: 183 STSTTDPY 190 Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 29/82 (35%), Gaps = 5/82 (6%) Query: 162 SVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGF-----LEDSNANSMYEMGQMIHL 216 S + QG + S G LE+SN + EM +I + Sbjct: 440 SFNNDQGLQLEGGNLYSATTESGTANIGRAGQGIYGSIYGEKLEESNVDVSTEMVDLIVM 499 Query: 217 TQKFNSITTLIDENEKSMLEAI 238 + + + + +I ++ + A+ Sbjct: 500 QRAYQANSKVITTVDEMLQTAL 521 >gi|114046838|ref|YP_737388.1| flagellar hook protein FlgE [Shewanella sp. MR-7] gi|113888280|gb|ABI42331.1| flagellar basal body FlaE domain protein [Shewanella sp. MR-7] Length = 453 Score = 88.0 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 38/125 (30%), Positives = 62/125 (49%), Gaps = 5/125 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61 SFNI L+ A ++ L+T A+N++N +T+GF+ + +F++V N VA+ Sbjct: 2 SFNIALSGISAAQKDLNTTANNIANANTIGFKESRAEFADVYANSIFSNSKTAVGGGVAT 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII---LTRDGRFKVTDDGSLVSAS 118 + GS T LD A++G +F S G + TR G FKV + +V ++ Sbjct: 62 SQVAQQFHQGSLQLTNNSLDLAIKGGGFFVTASEIGTLDHQFTRAGAFKVDKNNYMVDSA 121 Query: 119 GKYPV 123 G Y Sbjct: 122 GNYLQ 126 Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 13/91 (14%), Positives = 33/91 (36%), Gaps = 5/91 (5%) Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMY 208 ++ + L QG + N+ ++ P + ++ LE SN + Sbjct: 361 PLSRVALVRFANEQGLTQVGNTSWKASLESGPALAGEPNSGTFGSISSSALEQSNIDLTT 420 Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E+ +I + F + + ++ N ++ Sbjct: 421 ELVDLISAQRNFQANSRTLEVNNTLQQTVLQ 451 >gi|163781856|ref|ZP_02176856.1| flagellar hook protein FlgE [Hydrogenivirga sp. 128-5-R1-1] gi|159883076|gb|EDP76580.1| flagellar hook protein FlgE [Hydrogenivirga sp. 128-5-R1-1] Length = 494 Score = 88.0 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 39/205 (19%), Positives = 72/205 (35%), Gaps = 17/205 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M SF + A + +DN+SN +TV F+ + F +V+ ++ ++ Sbjct: 1 MLRSFFNAVTGMDASRFWIDVTSDNLSNVNTVAFKAHRPLFQDVISSVTIGLNVVTGTIK 60 Query: 54 --QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG--IILTRDGRFKVT 109 + V +G+F TG D A++G F L+ P + TRDG+F+++ Sbjct: 61 STTYGAGVVVDSTQKLWNIGNFKQTGVNTDLAIQGRGLFILKDPITGANLYTRDGQFRLS 120 Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169 DG +V++ G Y + ++ E+ + G S Sbjct: 121 RDGYMVTSGGFYLQGFRLNEAGEVVGTGLENIHVEQQLQPR------PTGQMSFLQPTNL 174 Query: 170 VRRENSGISPNIPPTPLEDLSGVTV 194 P T+ Sbjct: 175 NAEAIPPTVAFDPTNTTSYNYKYTI 199 Score = 83.0 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 33/93 (35%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANS 206 + K + + + + ++ + + PT L V+ G LE SN + Sbjct: 399 YSNGKSLPLYRVAVAVFTDPEELTKKGANLYTSITTPTILLAGGSEKVRSGMLEMSNVDI 458 Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E +I + + + +I + + E + Sbjct: 459 AKEFINLITAQRAYQANARVITTSNTILDETVN 491 >gi|113969606|ref|YP_733399.1| flagellar hook protein FlgE [Shewanella sp. MR-4] gi|113884290|gb|ABI38342.1| flagellar basal body FlaE domain protein [Shewanella sp. MR-4] Length = 453 Score = 88.0 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 38/125 (30%), Positives = 62/125 (49%), Gaps = 5/125 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61 SFNI L+ A ++ L+T A+N++N +T+GF+ + +F++V N VA+ Sbjct: 2 SFNIALSGISAAQKDLNTTANNIANANTIGFKESRAEFADVYANSIFSNSKTAVGGGVAT 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII---LTRDGRFKVTDDGSLVSAS 118 + GS T LD A++G +F S G + TR G FKV + +V ++ Sbjct: 62 SQVAQQFHQGSLQLTNNSLDLAIKGGGFFVTASEIGTLDHQFTRAGAFKVDKNNYMVDSA 121 Query: 119 GKYPV 123 G Y Sbjct: 122 GNYLQ 126 Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 13/91 (14%), Positives = 33/91 (36%), Gaps = 5/91 (5%) Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMY 208 ++ + L QG + N+ ++ P + ++ LE SN + Sbjct: 361 PLSRVALVRFANEQGLTQVGNTSWKASLESGPALAGEPNSGTFGSISSSALEQSNIDLTT 420 Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E+ +I + F + + ++ N ++ Sbjct: 421 ELVDLISAQRNFQANSRTLEVNNTLQQTVLQ 451 >gi|78355345|ref|YP_386794.1| flagella basal body rod domain-containing protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78217750|gb|ABB37099.1| flagella basal body rod domain protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 501 Score = 88.0 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 48/128 (37%), Gaps = 8/128 (6%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG--------AIKNDIDQK 55 S IG Q + + +N++N +TVGF+ + + ++ + Q+ Sbjct: 5 SLYIGATGMKTHSQGMQVIGNNLANINTVGFKQSMMLYQDLTSLDVTTGGNNPTVGMSQQ 64 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115 + + + G F + T D A+ G +F + TR G F+ +G LV Sbjct: 65 GMGASVAEVRVLHTAGGFEPSNTVTDLAISGKGFFQVAQGDKTHYTRAGNFRFDLEGYLV 124 Query: 116 SASGKYPV 123 G Sbjct: 125 DPGGYRLQ 132 Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 19/133 (14%), Positives = 45/133 (33%), Gaps = 5/133 (3%) Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170 G S+S + + + + + V + + + + L+ G Sbjct: 365 TGYEGSSSNLHRTQNGYAQGGLMSLAIDSEGVMSGKFSNGQVVDLYQIPLFRFTSEFGLR 424 Query: 171 RRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225 R + S ++ + +V LE SN ++ E MI + F S + Sbjct: 425 REGGNHFSATRESGEAQEGTAKTENFGSVAASTLEMSNVDASREFVNMIITQRGFQSQSK 484 Query: 226 LIDENEKSMLEAI 238 ++ + + +A+ Sbjct: 485 VVTTADTMLQKAL 497 >gi|126175146|ref|YP_001051295.1| flagellar hook protein FlgE [Shewanella baltica OS155] gi|125998351|gb|ABN62426.1| flagellar basal body FlaE domain protein [Shewanella baltica OS155] Length = 460 Score = 88.0 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 5/125 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61 SFNI L+ A ++ L+T A+N++N +T+GF+ + +F++V N VA+ Sbjct: 2 SFNIALSGIAAAQKDLNTTANNIANANTIGFKESRAEFADVYANSIFSNAKTAVGGGVAT 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI---ILTRDGRFKVTDDGSLVSAS 118 + GS T LD A++G +F S G TR G FKV + +V ++ Sbjct: 62 SQVAQQFHQGSLQLTNNSLDMAIKGGGFFVTSSELGTLDHAFTRAGAFKVDSNNYMVDSA 121 Query: 119 GKYPV 123 G Y Sbjct: 122 GNYLQ 126 Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 14/90 (15%), Positives = 33/90 (36%), Gaps = 5/90 (5%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYE 209 +A + L QG + N+ ++ P + ++ LE SN + E Sbjct: 369 LARVALVRFANEQGLTQVGNTSWKASLASGPALAGEANSGTFGSISSSALEQSNIDLTTE 428 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + +I + F + + ++ N ++ Sbjct: 429 LVDLISAQRNFQANSRTLEVNNTLQQTVLQ 458 >gi|303326942|ref|ZP_07357384.1| flagellar hook protein FlgE [Desulfovibrio sp. 3_1_syn3] gi|302862930|gb|EFL85862.1| flagellar hook protein FlgE [Desulfovibrio sp. 3_1_syn3] Length = 817 Score = 87.6 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 56/127 (44%), Gaps = 5/127 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG---AIKNDIDQKISFVA 60 S ++ LA +++ V +N++N T+GF++ ++ F++ + + + Q + V+ Sbjct: 6 SMWTSVSGLLAHGNKMNLVGNNIANVSTIGFKSQRMDFNDYLYMSGSSASGPTQIGAGVS 65 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESP--RGIILTRDGRFKVTDDGSLVSAS 118 + G+ +T + D A++G+ +F + TR G F + LV+ Sbjct: 66 TYAVLGDYSQGALETTNSGTDLAIDGNGYFGVRKTGSDQKYYTRAGDFFFDKERKLVNPE 125 Query: 119 GKYPVLD 125 G Sbjct: 126 GMVVQGW 132 Score = 73.0 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 18/128 (14%), Positives = 38/128 (29%), Gaps = 5/128 (3%) Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 ++ + D + + + + + + + +Y +QG R + Sbjct: 686 TSVTQNATQDGYASGTLSDVRIDTSGIIYGVYSNGTTLPLYQITMYDFQNNQGLWREGGN 745 Query: 176 GISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 S T K +E SN + E QMI + F + + I Sbjct: 746 LFSSTNDSGEPRIGVAGDNGFGTTKAYNIEQSNVDMSREFVQMITTQRGFQANSKGITTV 805 Query: 231 EKSMLEAI 238 + + I Sbjct: 806 DTMLETVI 813 >gi|117919772|ref|YP_868964.1| flagellar hook protein FlgE [Shewanella sp. ANA-3] gi|117612104|gb|ABK47558.1| GCN5-related N-acetyltransferase [Shewanella sp. ANA-3] Length = 453 Score = 87.6 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 38/125 (30%), Positives = 62/125 (49%), Gaps = 5/125 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61 SFNI L+ A ++ L+T A+N++N +T+GF+ + +F++V N VA+ Sbjct: 2 SFNIALSGISAAQKDLNTTANNIANANTIGFKESRAEFADVYANSIFSNSKTAVGGGVAT 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII---LTRDGRFKVTDDGSLVSAS 118 + GS T LD A++G +F S G + TR G FKV + +V ++ Sbjct: 62 SQVAQQFHQGSLQLTNNSLDLAIKGGGFFVTASEIGTLDHQFTRAGAFKVDKNNYMVDSA 121 Query: 119 GKYPV 123 G Y Sbjct: 122 GNYLQ 126 Score = 64.9 bits (156), Expect = 8e-09, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 33/91 (36%), Gaps = 5/91 (5%) Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMY 208 +A + L QG + N+ ++ P + ++ LE SN + Sbjct: 361 PLARVALVRFANEQGLTQVGNTSWKASLSSGPALAGEPNSGTFGSLSSSALEQSNIDLTT 420 Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E+ +I + F + + ++ N ++ Sbjct: 421 ELVDLISAQRNFQANSRTLEVNNTLQQTVLQ 451 >gi|86157813|ref|YP_464598.1| hypothetical protein Adeh_1387 [Anaeromyxobacter dehalogenans 2CP-C] gi|85774324|gb|ABC81161.1| conserved hypothetical protein [Anaeromyxobacter dehalogenans 2CP-C] Length = 428 Score = 87.6 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 37/137 (27%), Positives = 55/137 (40%), Gaps = 5/137 (3%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-KNDIDQKISFVA 60 T+ + G A LS V DN++N +TVGF++ + F + + Q Sbjct: 4 LTALSSGTTGLQASSLELSVVGDNIANANTVGFKSGRAAFEDALSQTVIGGSGQVGLGAR 63 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG----IILTRDGRFKVTDDGSLVS 116 G+ STG D AL+G+ +F + TRDG+F V DDG LV+ Sbjct: 64 LAGVQKILTQGALASTGLATDLALQGNGFFVVRGAHAGQTGTFYTRDGQFTVDDDGYLVN 123 Query: 117 ASGKYPVLDMASVPIQI 133 G A + Sbjct: 124 LEGLRVQGFPADPSGAV 140 Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 22/161 (13%), Positives = 47/161 (29%), Gaps = 9/161 (5%) Query: 83 ALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNV 142 A F+ P T S + G+ +++ + I V Sbjct: 268 AAPQPLDFSFGDPTSAGGTGLAGVTQFSATSASTFIGQDGYGSGQLASVRVGPEGVISGV 327 Query: 143 GEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG-ISPNIPPTP----LEDLSGVTVKRG 197 G+ +V+ + + R + P ++ G Sbjct: 328 FTNGQ----TRVLGQVAVAGFAAPDQLDRAGGNLLQQTPGSGQPVVGAAGAGGRASIVAG 383 Query: 198 FLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 LE SN + + ++I + F + + I ++ + E I Sbjct: 384 SLEQSNVDLAEQFVRLIAAQRAFQANSKTITTADQLLSELI 424 >gi|308050024|ref|YP_003913590.1| flagellar hook-basal body protein [Ferrimonas balearica DSM 9799] gi|307632214|gb|ADN76516.1| flagellar hook-basal body protein [Ferrimonas balearica DSM 9799] Length = 407 Score = 87.6 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 40/201 (19%), Positives = 68/201 (33%), Gaps = 11/201 (5%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SFNI L+ + Q L+T+++N++N T GFR + +F+ Q + Sbjct: 2 SFNIALSGLRSTSQDLNTISNNIANVSTPGFRGSRTEFAS-----VYAGGQGGGVAVANV 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPV 123 G + TG ELD A+ G +F + TR G F DG +V + G Sbjct: 57 SQNFNTGGDVLYTGRELDMAISGSGFFMTNNQGTTTYTRSGMFAQDKDGYVVDSHGGKLQ 116 Query: 124 LDMASVPIQIPQKDEIFNVGEKGE-----ISQKGKVIATMGLYSVDMSQGFVRRENS-GI 177 Q+ + G + G V+ F + S Sbjct: 117 GYQVGPNGQLLTGAVTDLQVQTGSLPANATTSMGLVLNLDSRNDAVDPANFDPADASTYH 176 Query: 178 SPNIPPTPLEDLSGVTVKRGF 198 + N + + + + Sbjct: 177 ALNSTKIYDSLGNEHNLTQYY 197 Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 57/158 (36%), Gaps = 10/158 (6%) Query: 85 EGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE 144 +G+ S I L+ +G + D V++ + I+I ++ V Sbjct: 251 DGNPILDGSSALDISLSFNGATQFGSD-FAVASMRQDGYSSGELSGIRIDDNGMLYGVYT 309 Query: 145 KGEISQKGKVIATMGLYSVDMSQGFVRRENSGI-SPNIPPTPLE----DLSGVTVKRGFL 199 G+ +G+VI L + G + N+ + P+ + ++ G + Sbjct: 310 NGQDQLQGQVI----LANFANPNGLQQVGNTAWTATFASGQPVTGAAGTGTMGSLTAGAI 365 Query: 200 EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 E SN + E+ ++ + + S +I +K Sbjct: 366 EGSNVDLTGELVNLMTAQRNYQSNAKVISTQDKLTQAL 403 >gi|37681979|gb|AAQ97867.1| FlgG [Photorhabdus luminescens] Length = 150 Score = 87.6 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 20/147 (13%), Positives = 45/147 (30%), Gaps = 6/147 (4%) Query: 99 ILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF-NVGEKGEISQKGKVIAT 157 TRDG F+ +G L +A+G + V K + + + Sbjct: 3 AYTRDGSFQEDQNGQLTTANGFLIFPTITIPDNATDLTISSDGIVSVKVQGQSVPQQVGQ 62 Query: 158 MGLYSVDMSQGFVRRENSGISPNIP-----PTPLEDLSGVTVKRGFLEDSNANSMYEMGQ 212 L + G + ++ ++E SN N E+ Sbjct: 63 FTLTTFINDSGLESIGENLYVETSSSGVPIENTPGINGAGLLQHKYVETSNVNIAEELVN 122 Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIR 239 MI + + + + +++ + + + Sbjct: 123 MIQTQRAYEVNSKAVSTSDQMLQKLTQ 149 >gi|258511381|ref|YP_003184815.1| fagellar hook-basal body protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478107|gb|ACV58426.1| fagellar hook-basal body protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 335 Score = 87.6 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 32/143 (22%), Positives = 59/143 (41%), Gaps = 24/143 (16%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50 M S N ++ A + L V +N++N +TVGF+ V+F++++ + Sbjct: 1 MLRSMNSAISGMQAFQTDLDVVGNNIANVETVGFKQSDVQFADLLSQTMSLGTAGTAPNP 60 Query: 51 --------------DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR 96 + +Q V + G +TG + A++G+ +F + + Sbjct: 61 GTGSSGATTGIGGTNPEQVGLGVQVAATQMDMSQGPDETTGVPTNVAIQGNGFFVVTNGT 120 Query: 97 GIILTRDGRFKVTDDGSLVSASG 119 LTR G F V G+LV +G Sbjct: 121 STYLTRAGNFSVDSAGNLVLPNG 143 Score = 58.3 bits (139), Expect = 8e-07, Method: Composition-based stats. Identities = 20/118 (16%), Positives = 39/118 (33%), Gaps = 6/118 (5%) Query: 128 SVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP---- 183 + + G S + V+ + L V QG V ++ S + P Sbjct: 214 GANGALTATLTLTPSSGSGSPSTQTVVLGYLALAQVPNPQGLVSVGDNLFSASSPAAGTP 273 Query: 184 --TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + T+ G LE SN + + +MI + + T +I + + + Sbjct: 274 TYWTPGQGTYGTLASGELEGSNVDLSQQFAEMIVAQNAYVANTHMIGTDNAILQALVN 331 >gi|254439743|ref|ZP_05053237.1| conserved domain protein [Octadecabacter antarcticus 307] gi|198255189|gb|EDY79503.1| conserved domain protein [Octadecabacter antarcticus 307] Length = 1412 Score = 87.6 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 32/170 (18%), Positives = 71/170 (41%), Gaps = 5/170 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG--AIKNDIDQKISFVAS 61 SF L + ++ ++N++N T GF+ + +F ++ ++N S Sbjct: 2 SFYTALTGLNGAQADIAASSNNIANVGTTGFKLSRAEFGDIFATSPLQNSTSSIGSGAIL 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALES---PRGIILTRDGRFKVTDDGSLVSAS 118 G+ ++ LD A+ G +FAL+ ++ TR+G F V ++ ++V +S Sbjct: 62 KGVKQQFTQGNISASLNALDMAISGQGFFALKPSLTSTQVVYTRNGSFNVDNNRNVVDSS 121 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 G++ + + + KD V + ++ T +V++ Sbjct: 122 GQFLLTYPVNEDGSVTAKDIDSAVPLRLPVTSGDPQGTTKVDLAVNVPAN 171 Score = 80.3 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 17/162 (10%), Positives = 44/162 (27%), Gaps = 6/162 (3%) Query: 84 LEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG-KYPVLDMASVPIQIPQKDEIFNV 142 L + + + L + + + + + Sbjct: 1248 LISPQGLTRYDSQSETFSISLDIDYSASSQLATPFSVNNLDQNGFTSGRLDGLNIDSNGL 1307 Query: 143 GEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRG 197 + + K + + L + + G + N+ T ++ G Sbjct: 1308 LRANYTNGQNKPLGKIVLANFNNQNGLKQVGNATFVETASSGEPIIGEAGTEGFGSIQSG 1367 Query: 198 FLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 LE SN + E+ +I + F + + I+ + + I Sbjct: 1368 ALERSNVDITEELVNLITAQRNFQASSKAIETSTQLTQTIIN 1409 >gi|114562342|ref|YP_749855.1| flagellar hook protein FlgE [Shewanella frigidimarina NCIMB 400] gi|114333635|gb|ABI71017.1| flagellar basal body FlaE domain protein [Shewanella frigidimarina NCIMB 400] Length = 459 Score = 87.6 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 5/126 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61 SFNI L+ A ++ L+T A+N++N +T+GF+ + +F++V N + Sbjct: 2 SFNIALSGIAAAQKDLNTTANNIANVNTIGFKESRAEFADVYANSIFSNSKTAVGGGATT 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESP---RGIILTRDGRFKVTDDGSLVSAS 118 + GS T LD A+ G +F S + TR G FKV +V ++ Sbjct: 62 TQVAQQFHQGSLQFTSNSLDMAISGGGFFVTSSELGSQDQSYTRAGAFKVDSSNYMVDSA 121 Query: 119 GKYPVL 124 G + Sbjct: 122 GNFLQG 127 Score = 65.3 bits (157), Expect = 7e-09, Method: Composition-based stats. Identities = 12/91 (13%), Positives = 33/91 (36%), Gaps = 5/91 (5%) Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMY 208 ++ + L QG + N+ ++ + +++ LE SN + Sbjct: 367 PLSRVALVRFANEQGLTQVGNTSWKASLDSGAALAGEANSGTFGSIRSSALEQSNVDLTT 426 Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E+ +I + F + + ++ N ++ Sbjct: 427 ELVDLISAQRNFQANSRTLEVNNTLNQTILQ 457 >gi|220904530|ref|YP_002479842.1| hypothetical protein Ddes_1261 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868829|gb|ACL49164.1| protein of unknown function DUF1078 domain protein [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 808 Score = 87.6 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 34/215 (15%), Positives = 74/215 (34%), Gaps = 14/215 (6%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA---IKNDIDQKISFVA 60 S ++ L+ Q+++ V +N++N T+GF++ ++ F++ + + Q + + Sbjct: 6 SMWTSVSGLLSHGQKMNVVGNNIANVSTLGFKSQRMDFNDYLYRGIGTTSGPSQIGAGAS 65 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR--GIILTRDGRFKVTDDGSLVSAS 118 GS ST + D A++G+ +F + P + TR G F D L + Sbjct: 66 VYAILGDFSQGSLESTNSVTDLAIDGNGFFQVRKPNSKQMYYTRAGDFYFNKDRELQNPE 125 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178 G + ++ N+G T +D ++ + Sbjct: 126 GYLLQGWKVNNEKKLTFNSGATNLGNTDLSKSAYVGSGTPTDIVLDSWNIIPQQTTNVTF 185 Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQM 213 + SN + M + + Sbjct: 186 TMGLTNDGKGDRTT---------SNTSPMTALFDL 211 Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 27/208 (12%), Positives = 53/208 (25%), Gaps = 8/208 (3%) Query: 39 VKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98 + S + E + + S + + G F G Sbjct: 597 AITATAFKPTAYTAPTDASRPVADTETANSSLASLTTMSRVSGTSPTGVPVFENVINYGT 656 Query: 99 ILTRDGRFKVTDDGSLVSASGKYPV---LDMASVPIQIPQKDEIFNVGEKGEISQKGKVI 155 + + + S+ + + D + + V + K + Sbjct: 657 TIPTMTAVERQEYASVANTTSYTVQNRTQDGYASGTLSNVNIDNGGVVYGIYSNGKTIPL 716 Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEM 210 + LY QG R + S + K +E SN + E Sbjct: 717 YQIALYDFQNHQGLYREGGNLFSATNDSGEPQLGVAGDNGFGKTKAYNIEQSNVDMTTEF 776 Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAI 238 QMI + F + + I + + I Sbjct: 777 VQMISTQRGFQANSKGITTVDTMLETVI 804 >gi|94968673|ref|YP_590721.1| flagellar basal body FlaE [Candidatus Koribacter versatilis Ellin345] gi|94550723|gb|ABF40647.1| flagellar basal body FlaE [Candidatus Koribacter versatilis Ellin345] Length = 409 Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 34/128 (26%), Positives = 56/128 (43%), Gaps = 5/128 (3%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-----QKI 56 F+I L+ A L+T+A+N++N +T+G++ + F ++ Q Sbjct: 1 MPMFSIPLSGLTASSTALATIANNLANQNTIGYKQTRALFRDLFYQQIGQTGSGDPIQVG 60 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVS 116 + G + GS TG D A+ GD +F + I TR G FKV DG+L + Sbjct: 61 AGTMIGTIDTNFTDGSVSPTGVPTDVAIMGDGFFVAQQNGNDIYTRAGNFKVGADGTLRT 120 Query: 117 ASGKYPVL 124 G + Sbjct: 121 QDGAVVLG 128 Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 17/121 (14%), Positives = 36/121 (29%), Gaps = 5/121 (4%) Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183 D + E + K +I + + S QG + + + Sbjct: 286 QDGYGSGMLQNFNIGADGTIEGTFSNGKTSIIGQIAIASFPNVQGLRKVGQNAYVGTLAS 345 Query: 184 TPLEDLSGVTVKRG-----FLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 + + RG LE SN + E +I + + + +I ++ + I Sbjct: 346 GQAALGAPGSGGRGTLGGGALELSNVDMATEFSNLIVAQRGYQANAKVITTFDEITQDTI 405 Query: 239 R 239 Sbjct: 406 N 406 >gi|161526186|ref|YP_001581198.1| flagellar hook protein FlgE [Burkholderia multivorans ATCC 17616] gi|189349098|ref|YP_001944726.1| flagellar hook protein FlgE [Burkholderia multivorans ATCC 17616] gi|160343615|gb|ABX16701.1| flagellar basal body FlaE domain protein [Burkholderia multivorans ATCC 17616] gi|189333120|dbj|BAG42190.1| flagellar hook protein [Burkholderia multivorans ATCC 17616] Length = 414 Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 63/189 (33%), Gaps = 2/189 (1%) Query: 8 GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVASGKEY 65 GL+ L + +N++N +TVGF++ +FS++ Q A Sbjct: 6 GLSGLAGASNALDVIGNNIANANTVGFKSSTAQFSDMYANSIATSVNTQIGIGTALASVQ 65 Query: 66 LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125 G+ +T + LD A+ G+ +F + + I TRDG F+ +G +V++ G + Sbjct: 66 QQFGQGTINTTNSSLDVAINGNGFFQMSNNGTITYTRDGTFQRDKNGYIVNSQGLNLMGY 125 Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185 A I + I+ T + Sbjct: 126 AADKNGVINTAQTVPLQAPTTNIAPTATTKITGQFNLNSQDTVPTKTPFDATDTTTYNYS 185 Query: 186 LEDLSGVTV 194 ++ Sbjct: 186 TSIQVYDSL 194 Score = 67.6 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 13/125 (10%), Positives = 35/125 (28%), Gaps = 5/125 (4%) Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 D + + + V+ + L + + G V + + Sbjct: 289 NNLAQDGYASGTLATFTIGTDGKVTGNYSNGQTAVLGQIALANFNNPNGLVNIGGNQYAE 348 Query: 180 NIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 + + T++ LE+SN + ++ +I + + + I + Sbjct: 349 TAASGVPQISVPGSTNHGTLQGSALENSNVDLTSQLVNLITAQRNYQANAQTIKTQQTVD 408 Query: 235 LEAIR 239 I Sbjct: 409 QTLIN 413 >gi|260767769|ref|ZP_05876704.1| flagellar hook protein FlgE [Vibrio furnissii CIP 102972] gi|260617278|gb|EEX42462.1| flagellar hook protein FlgE [Vibrio furnissii CIP 102972] gi|315179399|gb|ADT86313.1| flagellar hook protein FlgE [Vibrio furnissii NCTC 11218] Length = 434 Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 65/171 (38%), Gaps = 6/171 (3%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGK 63 + L+ A + L+T ++N++N +T GF+ + +F +V N V + K Sbjct: 3 YVSLSGLSAAQLDLNTTSNNIANANTFGFKESRAEFGDVYSNSLFTNAKTTPGGGVQANK 62 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWF----ALESPRGIILTRDGRFKVTDDGSLVSASG 119 GS I T +D + G +F P+ LTR+G F + + +V+++ Sbjct: 63 VAQQFHEGSSIYTNNPMDLRISGTGFFAVAKDRLVPQQNELTRNGAFHLDKNNYMVTSND 122 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170 +Y + + E + E + + ++ + Sbjct: 123 EYLLGYQVNPDTGDVLSYEPAPLNIPAEFGKPKQTSNIEVGVNLPANGDLK 173 Score = 66.8 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 34/98 (34%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI-----PPTPLEDLSGVTVKRGFLED 201 + + + + L V QG ++ + S T+ G LE Sbjct: 335 YSNGENITLGRVALVRVPNEQGLDKKGGTQWDSTQFSGDKIWGESNKGSFGTINNGTLEQ 394 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ +I + F + + ++ + + ++ Sbjct: 395 SNIDMTQELVDLISAQRNFQANSRALEVHNQLQQNILQ 432 >gi|238028849|ref|YP_002913080.1| flagellar hook protein FlgE [Burkholderia glumae BGR1] gi|237878043|gb|ACR30376.1| Hypothetical protein bglu_1g33140 [Burkholderia glumae BGR1] Length = 412 Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 30/189 (15%), Positives = 65/189 (34%), Gaps = 2/189 (1%) Query: 8 GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG--KEY 65 GL+ L + +N++N +TVGF+ +FS++ + + + Sbjct: 6 GLSGLQGASSDLDVIGNNIANANTVGFKAASAQFSDLYANSVSGAVANGIGIGTQLATVA 65 Query: 66 LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125 + G F ++ L A+ G+ +F + S TRDG+F G++ +++G + Sbjct: 66 QVFQQGGFATSQNPLSMAISGNGFFQVNSNGVTTYTRDGQFSPNASGNITNSAGGQLMGY 125 Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185 + I + +G I K T + + Sbjct: 126 GVNADGSINTSAIVPLTAPQGNIPPKATSSITGQFNLSTTDTAQTNSPFNFSDSSTYTLK 185 Query: 186 LEDLSGVTV 194 + ++ Sbjct: 186 QPVQAYDSL 194 Score = 62.2 bits (149), Expect = 6e-08, Method: Composition-based stats. Identities = 9/98 (9%), Positives = 29/98 (29%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLED 201 + + + + + + + QG + + + T+K E+ Sbjct: 314 YSNGQSMKLGQVFVVNFNDPQGLTSIGGNQYIQTAASGVPQIGVPGSTNHGTIKGSTTEN 373 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S + E+ +I + + + I + + Sbjct: 374 STVDLTGELVNLITAQRNYQANAQTIKTQQTVDQTLLN 411 >gi|2832235|gb|AAC01569.1| flagellar hook [Brucella abortus] Length = 396 Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 5/123 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M G++ A RLSTVADN++N TVG++ + +FS +V S V Sbjct: 6 MMR---TGVSGMNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAGQYNSGS-VL 61 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASG 119 + Y + G ST + D A++G+ +F ++ P G TR G F +G LV+++G Sbjct: 62 TDVRYGISDQGGIRSTSSTTDLAIDGNGYFVVQGPGGSTYLTRAGSFVPDKNGDLVNSAG 121 Query: 120 KYP 122 Y Sbjct: 122 YYL 124 Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 10/54 (18%), Positives = 22/54 (40%) Query: 186 LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + + G LE+SNA+ E+ MI + + + + + + M + Sbjct: 340 PQGDGMGKIMSGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGFELMDVLVN 393 >gi|291613038|ref|YP_003523195.1| fagellar hook-basal body protein [Sideroxydans lithotrophicus ES-1] gi|291583150|gb|ADE10808.1| fagellar hook-basal body protein [Sideroxydans lithotrophicus ES-1] Length = 405 Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 29/132 (21%), Positives = 60/132 (45%), Gaps = 2/132 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61 F GL+ A + L + +N++N TVGF+ + +F++V + + Q Sbjct: 2 GFQQGLSGLNAASKSLDVIGNNVANASTVGFKQSQAQFADVYASSMAGSSGGQAGIGTRV 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 G+ +T LD A+ G +F +++ I +R+G+F++ +G +V++ G Sbjct: 62 ATVAQQFTQGNITTTNNSLDMAVSGSGFFRMDNNGSITFSRNGQFQLDKNGFIVNSQGYK 121 Query: 122 PVLDMASVPIQI 133 + + I Sbjct: 122 LTGFLPNAAGAI 133 Score = 71.1 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 15/125 (12%), Positives = 38/125 (30%), Gaps = 5/125 (4%) Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 D + + + + K +A + L + +QG N+ Sbjct: 279 NSLSQDGYTSGHMTGFSTGSDGIVTGRYSNGQTKTLAQVVLANFSNAQGLQPLGNNQWVE 338 Query: 180 NIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 + + ++ +EDSN + E+ MI + + + I ++ + Sbjct: 339 TSTSGTPLVGAPGSASLGVLQTSAVEDSNVDLTAELVNMITAQRVYQANAQTIKTQDQVL 398 Query: 235 LEAIR 239 + Sbjct: 399 QTIVN 403 >gi|24374758|ref|NP_718801.1| flagellar hook protein FlgE [Shewanella oneidensis MR-1] gi|24349424|gb|AAN56245.1|AE015762_2 flagellar hook protein FlgE [Shewanella oneidensis MR-1] Length = 453 Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 37/125 (29%), Positives = 62/125 (49%), Gaps = 5/125 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61 SFNI L+ A ++ L+T A+N++N +T+GF+ + +F++V N VA+ Sbjct: 2 SFNIALSGISAAQKDLNTTANNIANANTIGFKESRAEFADVYANSIFSNSKTAVGGGVAT 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII---LTRDGRFKVTDDGSLVSAS 118 + GS T LD A++G +F S G + TR G FKV + +V ++ Sbjct: 62 SQVAQQFHQGSLQLTNNSLDLAIKGGGFFVTASEIGTLDHQFTRAGAFKVDKNNYMVDSA 121 Query: 119 GKYPV 123 G + Sbjct: 122 GNFLQ 126 Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 33/91 (36%), Gaps = 5/91 (5%) Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMY 208 +A + L QG + N+ ++ P + ++ LE SN + Sbjct: 361 PLARVALVRFANEQGLTQVGNTSWKASLSSGPALAGEPNSGTFGSLSSSALEQSNIDLTT 420 Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E+ +I + F + + ++ N ++ Sbjct: 421 ELVDLISAQRNFQANSRTLEVNNTLQQTVLQ 451 >gi|329901230|ref|ZP_08272755.1| Flagellar hook protein flgE [Oxalobacteraceae bacterium IMCC9480] gi|327549162|gb|EGF33754.1| Flagellar hook protein flgE [Oxalobacteraceae bacterium IMCC9480] Length = 407 Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 81/202 (40%), Gaps = 7/202 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA--IKNDIDQKISFVAS 61 F GL+ A + L +N++N+ TVGF++ + +F++V + Q + Sbjct: 2 GFQQGLSGLNAASKSLEVTGNNVANSSTVGFKSAQAQFADVYASSLTGGGASQVGIGTSV 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 G+ ++ LD A+ G +F L + I +R+G+F++ +G +V+++G + Sbjct: 62 ATVAQQFTQGNVTASNNPLDLAINGGGFFRLSTGGAITYSRNGQFQLDKNGGIVNSNGAH 121 Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGK-----VIATMGLYSVDMSQGFVRRENSG 176 S + V +++ K ++ + + F + + Sbjct: 122 LTGFGVSATGVLATGTPSNLVINTADLAPKTTSEVKLLVNLDSRETTPKTTTFSATDPTS 181 Query: 177 ISPNIPPTPLEDLSGVTVKRGF 198 + + + + L V + + Sbjct: 182 YNRSTSVSVFDSLGNSHVLQSY 203 Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 13/98 (13%), Positives = 31/98 (31%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLED 201 + K + + L + G N+ S + ++ +ED Sbjct: 308 YTNGKSATLGQVVLSNFTNPNGLQNLGNNVWSETAASGGPLVGTPNSGNLGVLQSSAVED 367 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ MI + + + I ++ + + Sbjct: 368 SNVDLTAELVNMITAQRFYQANAQTIKTQDQVLQTLVN 405 >gi|254720773|ref|ZP_05182584.1| flagellar hook protein FlgE [Brucella sp. 83/13] gi|265985831|ref|ZP_06098566.1| flagellar hook protein flgE [Brucella sp. 83/13] gi|306840136|ref|ZP_07472921.1| flagellar hook protein FlgE [Brucella sp. NF 2653] gi|264664423|gb|EEZ34684.1| flagellar hook protein flgE [Brucella sp. 83/13] gi|306404781|gb|EFM61075.1| flagellar hook protein FlgE [Brucella sp. NF 2653] Length = 396 Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 5/123 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M G++ A RLSTVADN++N TVG++ + +FS +V S V Sbjct: 6 MMR---TGVSGMNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAGQYNSGS-VL 61 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASG 119 + Y + G ST + D A++G+ +F ++ P G TR G F +G LV+++G Sbjct: 62 TDVRYGISDQGGIRSTSSTTDLAIDGNGYFVVQGPGGSTYLTRAGSFVPDKNGDLVNSAG 121 Query: 120 KYP 122 Y Sbjct: 122 YYL 124 Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 9/54 (16%), Positives = 22/54 (40%) Query: 186 LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + + G LE+SNA+ E+ MI + + + + + + + + Sbjct: 340 PQGDGMGKIMSGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGSELIDVLVN 393 >gi|218674739|ref|ZP_03524408.1| flagellar hook protein FlgE [Rhizobium etli GR56] Length = 433 Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 2/125 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 S ++ A RLSTVADN++N +T G++ + FS +V + V + Sbjct: 6 SMKTAVSGMNAQANRLSTVADNIANVNTSGYKAVSTSFSSLVLPSSGG-NYNSGGVQTSV 64 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGKYP 122 + G T + D A+ GD +F ++ G +LTR G F+ D+G+LV+++G Sbjct: 65 RQAVSDQGDISYTTSTTDLAISGDGFFIVQGADGTPVLTRAGDFQKDDEGNLVNSAGFQL 124 Query: 123 VLDMA 127 + Sbjct: 125 MGYSY 129 Score = 71.8 bits (174), Expect = 8e-11, Method: Composition-based stats. Identities = 17/121 (14%), Positives = 35/121 (28%), Gaps = 1/121 (0%) Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178 + V I + + + + + G V N Sbjct: 311 NGQAATPVKDVTIDGDGIVYAKYEDGSTKPLYRIPLANVASPDKLTLMSGNVYSANGQSG 370 Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 + P + T+K G LE SN + E+ +MI + + + + + M + Sbjct: 371 VTVTGFPQTNG-LGTIKSGALEGSNVDLAGELTEMIESQRSYTANSKVFQTGSDIMDVLV 429 Query: 239 R 239 Sbjct: 430 N 430 >gi|251772436|gb|EES53003.1| probable flagellar hook protein FlgE [Leptospirillum ferrodiazotrophum] Length = 458 Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 37/187 (19%), Positives = 74/187 (39%), Gaps = 7/187 (3%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN------DIDQK 55 +S + + A+ +S + +N+SN +T GF+ + F+ + G Q Sbjct: 4 LSSMYVANSGLSAMGTDMSVIGNNISNMNTNGFKAGRAVFANIYGQTLAGKSNAVGPSQP 63 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSL 114 S V GS +T LD A++G+ +F+ + + I+ R+G + +G + Sbjct: 64 GSGVYVESIEPLFTQGSVQTTSNALDLAIQGNGFFSFRNRQGAILYGRNGALSLDRNGRI 123 Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174 V G MA +I K +V + + + + + +M++ + Sbjct: 124 VDQGGHILQGYMADARGKILPKVRDLSVPQSTIPPKASQNVYSRINLDANMTEKLKTGKT 183 Query: 175 SGISPNI 181 S NI Sbjct: 184 FSKSSNI 190 Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 14/95 (14%), Positives = 31/95 (32%), Gaps = 5/95 (5%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLEDSNANSM 207 + + + + + G V + +I V LE SN + Sbjct: 364 HNLGAIAVSTFNNPNGLVSVGANLYKESIGSGIANIGRAGQGGRGQVLANSLEQSNVDLG 423 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 +M MI + + + ++I + + M + I Sbjct: 424 RQMIDMISAERGYQANASVISADNQLMNTLLTRIG 458 >gi|82702453|ref|YP_412019.1| flagellar hook protein FlgE [Nitrosospira multiformis ATCC 25196] gi|82410518|gb|ABB74627.1| conserved hypothetical protein [Nitrosospira multiformis ATCC 25196] Length = 406 Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 35/133 (26%), Positives = 60/133 (45%), Gaps = 2/133 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN--DIDQKISFVAS 61 SF GL+ A + L + +N++NT+TVGF+ + +F+++ + Q V Sbjct: 2 SFQQGLSGLNAASKNLDVIGNNVANTNTVGFKQSQAQFADMFANSLSGGGGTQAGIGVKL 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 GS + D A+ G ++ L I +R+G+F DG +V++SG Sbjct: 62 AGIAQQFSQGSITVSNNPFDIAISGAGFYRLSDQGTISYSRNGQFHPDKDGYIVNSSGLR 121 Query: 122 PVLDMASVPIQIP 134 MA+ QI Sbjct: 122 LTGYMANSTGQIN 134 Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 14/90 (15%), Positives = 29/90 (32%), Gaps = 5/90 (5%) Query: 155 IATMGLYSVDMSQGFVRRENSGI-----SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYE 209 + + L + QG N+ S ++ G +EDSN E Sbjct: 315 MGQIALANFANPQGLQAVGNNTWKESAASGAALVAAPATGGLGVLQAGAVEDSNVELTSE 374 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + MI + + + I ++ + + Sbjct: 375 LVNMITAQRVYQANAQTIKTQDQILQTVVN 404 >gi|254470088|ref|ZP_05083492.1| flagellar hook protein [Pseudovibrio sp. JE062] gi|211960399|gb|EEA95595.1| flagellar hook protein [Pseudovibrio sp. JE062] Length = 561 Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 26/200 (13%), Positives = 67/200 (33%), Gaps = 8/200 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF-VASG 62 + N A + L ++ N++N+ T G++ + FS++V + + +++S V + Sbjct: 6 AINSATTGLDAQSKALENISGNVANSSTTGYKRLDTSFSDLVSSTGSRQAEQVSGTVIAT 65 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFAL-------ESPRGIILTRDGRFKVTDDGSLV 115 + G S A+ G +F + + TR G F++ + +LV Sbjct: 66 SRATNYLSGDITSADRNTYMAINGPGYFLVTNRDGLGQETPESFYTRAGDFELDTERNLV 125 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 +++G + + + + + ++ Sbjct: 126 NSAGYFLQGYPINPATGAVSDRAVPIQVSDAPMPAQPSTQINYQANLPSKPTTANYQKTD 185 Query: 176 GISPNIPPTPLEDLSGVTVK 195 G + + P ++ Sbjct: 186 GAANSQYVDPSVFAEPHELQ 205 Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats. Identities = 12/78 (15%), Positives = 31/78 (39%) Query: 162 SVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221 + R + + S + +G T++ LE SNA+ E ++I Q ++ Sbjct: 481 TFAAEHELQRVDGAAFSETSTSGEPDFRNGGTIRAKALESSNADIAKEFSKLIITQQAYS 540 Query: 222 SITTLIDENEKSMLEAIR 239 + + ++ + + + Sbjct: 541 ANSKVLSTANQMLDSVLN 558 >gi|288962673|ref|YP_003452967.1| flagellar hook protein [Azospirillum sp. B510] gi|288914939|dbj|BAI76423.1| flagellar hook protein [Azospirillum sp. B510] Length = 427 Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 4/135 (2%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 ++ G++ A RL+ ++DN+SN+ TVG++ V FS +V A + S V S Sbjct: 5 SAMRSGVSGMAAQSSRLAAISDNISNSQTVGYKRATVDFSTLVTAPGDRTSYSASGVQSN 64 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALES----PRGIILTRDGRFKVTDDGSLVSAS 118 Y ++ G+ + TG+ D A+ GD +F + + LTR G F D G L + + Sbjct: 65 LHYQMQQDGTLLGTGSSTDMAISGDGFFVVGNRATGTPDYALTRAGSFLPDDGGFLRNTA 124 Query: 119 GKYPVLDMASVPIQI 133 G+Y + Sbjct: 125 GQYLQGWKLDPNGNL 139 Score = 67.6 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 36/92 (39%), Gaps = 5/92 (5%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGI-----SPNIPPTPLEDLSGVTVKRGFLEDSNANSM 207 + + + + +V G V + + S + + +V LE SN + Sbjct: 333 QALYQVPVANVTNPDGLVAQTGNTFTLGRDSGTLTLSAGNSGKAGSVVGSALEQSNVDIA 392 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E+ +I + ++S TL+ ++ + E R Sbjct: 393 TELVSLIETQRAYSSSATLVRTTDEMVEETTR 424 >gi|242277989|ref|YP_002990118.1| hypothetical protein Desal_0512 [Desulfovibrio salexigens DSM 2638] gi|242120883|gb|ACS78579.1| protein of unknown function DUF1078 domain protein [Desulfovibrio salexigens DSM 2638] Length = 529 Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 26/132 (19%), Positives = 46/132 (34%), Gaps = 5/132 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG- 62 S G++ A Q +S + +N++N +T+GF+ + F + + N Sbjct: 6 SMYNGISGIRAHSQAMSIIGNNLANGNTIGFKGARTSFEDSFYSAVNTGGGIGQVGHGVG 65 Query: 63 --KEYLSKEVGSFISTGTELDFALEGDAWFALESPRG--IILTRDGRFKVTDDGSLVSAS 118 Y + G F + + A+ G +F + P TR G F G L Sbjct: 66 IASIYGDFKQGPFEPSSEATNVAIGGKGFFTVRHPDTDGTYYTRAGNFIFNKQGVLTDPH 125 Query: 119 GKYPVLDMASVP 130 G + Sbjct: 126 GYVVQGWKVNPN 137 Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats. Identities = 20/144 (13%), Positives = 50/144 (34%), Gaps = 10/144 (6%) Query: 102 RDGRFKVT-DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 R + + D G+ ++ + +++ + + G++ + + L Sbjct: 387 RSASYSTSYDTGNARNSQSQNGYGAGFLQAVEVDRDGVVTGRYSNGQV----LDLYVLTL 442 Query: 161 YSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIH 215 + + G R + S P ++ LE SN + EM ++I Sbjct: 443 ANFNNQYGLRREGGNLFSSTRDSGPALTGRAGTGPLGSIASNKLEQSNVDVGDEMVKLIT 502 Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239 + F + + I ++ + E I+ Sbjct: 503 TQRGFQANSKAITTADQLLGELIQ 526 >gi|161621182|ref|YP_001595068.1| flagellar hook protein FlgE [Brucella canis ATCC 23365] gi|254702383|ref|ZP_05164211.1| flagellar hook protein FlgE [Brucella suis bv. 3 str. 686] gi|260568714|ref|ZP_05839183.1| flagellar hook protein FlgE [Brucella suis bv. 4 str. 40] gi|261752946|ref|ZP_05996655.1| flagellar hook protein FlgE [Brucella suis bv. 3 str. 686] gi|161337993|gb|ABX64297.1| flagellar basal body FlaE domain protein [Brucella canis ATCC 23365] gi|260155379|gb|EEW90460.1| flagellar hook protein FlgE [Brucella suis bv. 4 str. 40] gi|261742699|gb|EEY30625.1| flagellar hook protein FlgE [Brucella suis bv. 3 str. 686] Length = 396 Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 5/123 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M G++ A RLSTVADN++N TVG++ + +FS +V S V Sbjct: 6 MMR---TGVSGMNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAGQYNSGS-VL 61 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASG 119 + Y + G ST + D A++G+ +F ++ P G TR G F +G LV+++G Sbjct: 62 TDVHYGISDQGGIRSTSSTTDLAIDGNGYFVVQGPGGSTYLTRAGSFVPDKNGDLVNSAG 121 Query: 120 KYP 122 Y Sbjct: 122 YYL 124 Score = 68.7 bits (166), Expect = 6e-10, Method: Composition-based stats. Identities = 10/54 (18%), Positives = 22/54 (40%) Query: 186 LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + + G LE+SNA+ E+ MI + + + + + + M + Sbjct: 340 PQGDGMGKIMSGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGSELMDVLVN 393 >gi|302343734|ref|YP_003808263.1| fagellar hook-basal body protein [Desulfarculus baarsii DSM 2075] gi|301640347|gb|ADK85669.1| fagellar hook-basal body protein [Desulfarculus baarsii DSM 2075] Length = 786 Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 36/92 (39%), Gaps = 5/92 (5%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGI-SPNIPPTPLE----DLSGVTVKRGFLEDSNANSM 207 K + + L +G R ++ P+E +++ G LE SN + Sbjct: 692 KTLGQVMLVDFANPEGLAREGDNLWSQTTKSGEPIENTPGQGGTGSIESGALEQSNVDLA 751 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 EM +MI + + + + I ++ + E I Sbjct: 752 TEMVKMILYQRAYQANSKSISTTDQMLQELIN 783 Score = 82.2 bits (201), Expect = 6e-14, Method: Composition-based stats. Identities = 36/181 (19%), Positives = 67/181 (37%), Gaps = 8/181 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M T+ G+A Q LS VADN++N +T G++ +V F +V+ ++ V Sbjct: 3 MLTAMWAGVAGLNVHGQALSAVADNVANVNTHGYKASRVNFGDVMIHSLTVGGTVVNQVG 62 Query: 61 SGKEY----LSKEVGSFISTGTELDFALEGDAWFALES----PRGIILTRDGRFKVTDDG 112 +G + GSF +T D A+ G +F + + TR G+F + +G Sbjct: 63 TGAKVLSVQNLLTQGSFETTDVPTDMAINGGGFFQVNNTSAGQTAKYYTRAGQFLLDTEG 122 Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172 +V+ G I + + I + + ++ Sbjct: 123 YMVNPQGYRLQGYNVDANGDILAVPADLRITTVQTDAIATSAIDISMNLNSEDTKKLHPS 182 Query: 173 E 173 + Sbjct: 183 Q 183 >gi|294852968|ref|ZP_06793640.1| flagellar hook protein FlgE [Brucella sp. NVSL 07-0026] gi|294818623|gb|EFG35623.1| flagellar hook protein FlgE [Brucella sp. NVSL 07-0026] Length = 396 Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 5/123 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M G++ A RLSTVADN++N TVG++ + +FS +V S V Sbjct: 6 MMR---TGVSGMNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAGQYNSGS-VL 61 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASG 119 + Y + G ST + D A++G+ +F ++ P G TR G F +G LV+++G Sbjct: 62 TDVRYGISDQGGIRSTSSTTDLAIDGNGYFVVQGPGGSTYLTRAGSFVPDKNGDLVNSAG 121 Query: 120 KYP 122 Y Sbjct: 122 YYL 124 Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats. Identities = 10/54 (18%), Positives = 23/54 (42%) Query: 186 LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + + G LE+SNA+ E+ MI + + + + + + + M + Sbjct: 340 PQGDGMGKIMSGTLEESNADIAQELTDMIEAQRSYTANSKVFQTDSELMDVLVN 393 >gi|256059804|ref|ZP_05449999.1| flagellar hook protein FlgE [Brucella neotomae 5K33] gi|261323784|ref|ZP_05962981.1| flagellar hook protein flgE [Brucella neotomae 5K33] gi|261299764|gb|EEY03261.1| flagellar hook protein flgE [Brucella neotomae 5K33] Length = 396 Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 5/123 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M G++ A RLSTVADN++N TVG++ + +FS +V S V Sbjct: 6 MMR---TGVSGMNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAGQYNSGS-VL 61 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASG 119 + Y + G ST + D A++G+ +F ++ P G TR G F +G LV+++G Sbjct: 62 TDVRYGISDQGGIRSTSSTTDLAIDGNGYFVVQGPGGSTYLTRAGSFVPDKNGDLVNSAG 121 Query: 120 KYP 122 Y Sbjct: 122 YYL 124 Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats. Identities = 10/54 (18%), Positives = 22/54 (40%) Query: 186 LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + + G LE+SNA+ E+ MI + + + + + + M + Sbjct: 340 PQGDGMGKIMSGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGSELMDVLVN 393 >gi|319781665|ref|YP_004141141.1| flagellar hook-basal body protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167553|gb|ADV11091.1| flagellar hook-basal body protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 419 Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 36/124 (29%), Positives = 56/124 (45%), Gaps = 5/124 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M G++ A RLSTVADN++N+DT G++ +FS +V V Sbjct: 6 MMR---TGVSGMNAQANRLSTVADNIANSDTTGYKRSSAEFSTLVMPSTGGAYNSG-GVT 61 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASG 119 + + G T + D A+ GD +F ++ P G TR G F G LV+++G Sbjct: 62 TTIRQAVSDPGVLQYTTSVSDLAVSGDGFFVVQDPSGTPYLTRAGAFVPDGQGRLVNSAG 121 Query: 120 KYPV 123 + Sbjct: 122 FQLM 125 Score = 73.4 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 30/244 (12%), Positives = 66/244 (27%), Gaps = 27/244 (11%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65 ++ +A DN+ N + + Q F S Sbjct: 190 YTSKSSMVAY--------DNLGN------KKLLDV---YFTNTGAGTWQVAVFDQSKATA 232 Query: 66 LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125 + + + + +P + T + D S ++ G + Sbjct: 233 GTSFPYTAGGLLGSANLTFDTTTGKLTGTPTNVSFTVPNGATLNLDLSALTQLGTGFTVS 292 Query: 126 MASVPIQIPQKDEIFNVGEKGEISQK-----GKVIATMGLYSVDMSQGFVRRENSGISPN 180 A V P + + + G I + K + + L V + S Sbjct: 293 DAQVNGNAPSTIDKVQISKDGTIYAQYKDGSTKPLYKIPLADVQSPDQLKALPGNVYSQG 352 Query: 181 IPPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 + + ++ G LE+SN + E+ MI + + + + + M Sbjct: 353 TESGAVRVGFANEGKLGSIISGALENSNVDIAEELTNMIAAQRSYTANSKVFQTGSDLMD 412 Query: 236 EAIR 239 + Sbjct: 413 VLVN 416 >gi|32477561|ref|NP_870555.1| flagellar hook protein FlgE [Rhodopirellula baltica SH 1] gi|32448115|emb|CAD77632.1| flagellar hook protein FlgE [Rhodopirellula baltica SH 1] gi|327543123|gb|EGF29559.1| flagellar hook protein FlgE [Rhodopirellula baltica WH47] Length = 811 Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 31/161 (19%), Positives = 65/161 (40%), Gaps = 13/161 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------K 49 Q++ L A E ++ + +N++N TVGF++ F+ Sbjct: 4 QSALTTALTGLSAAETQIDVIGNNLANAQTVGFKSSDAVFATQFLQTLSLGAGPSANNGG 63 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKV 108 + Q V + + G+ + + D A++GD +F +++ G + TR+G FK+ Sbjct: 64 TNPRQIGLGVQVAEIAANHNQGTIEISSSSSDLAIQGDGFFQVQAADGEKLYTRNGIFKL 123 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEIS 149 D LV+A+G+ + ++ + G + Sbjct: 124 NSDAELVNATGQRLLGYGIDEQFRLQTDSLVPLSVPLGTKT 164 Score = 57.6 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 35/91 (38%), Gaps = 7/91 (7%) Query: 155 IATMGLYSVDMSQGFVRRENSGISP------NIPPTPLEDLSGVTVKRGFLEDSNANSMY 208 + + L G R + + + P E+ TV G LE SN + Sbjct: 719 LGQLQLARFANPAGLEARGLNLYAEGVNTGLPVTGQPGENG-IGTVIGGALELSNTDIGK 777 Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 ++ +++ + ++ + +I ++ + E + Sbjct: 778 DLVELVLASTQYRGNSRVITTTQQLIDELLN 808 >gi|217959237|ref|YP_002337785.1| flagellar hook protein FlgE [Bacillus cereus AH187] gi|229138454|ref|ZP_04267043.1| Flagellar hook protein flgE [Bacillus cereus BDRD-ST26] gi|217065278|gb|ACJ79528.1| flagellar hook protein [Bacillus cereus AH187] gi|228644991|gb|EEL01234.1| Flagellar hook protein flgE [Bacillus cereus BDRD-ST26] Length = 407 Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 31/197 (15%), Positives = 64/197 (32%), Gaps = 13/197 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49 M + + A + LS ++N++N TVG++ K F +++ Sbjct: 1 MIKALYTSITGMNATQNALSVTSNNIANAQTVGYKKQKAMFDDLLYNNSIGAKGDDRYAG 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107 + + V G+ TG + A+EG+ +F + TR G F Sbjct: 61 TNPKSIGNGVKMSGTVTDYTDGTITLTGGKTQAAMEGNGFFVVGDSKAGNMEFTRKGTFT 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 ++ D + + G+Y A I + S G + + G+ ++ Sbjct: 121 ISSDYYITNTEGQYVFAYPADSSTGNVDLSGIPGPLQVPMGSAIGGIRTSKGVVGGNIPA 180 Query: 168 GFVRRENSGISPNIPPT 184 + + Sbjct: 181 DAKQITQELPVYDNAGN 197 Score = 63.0 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 11/93 (11%), Positives = 28/93 (30%), Gaps = 5/93 (5%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYE 209 + + G ++ N + L V+ E +N + E Sbjct: 315 AGQLAVAMFPNEGGLMKTGNGNYTATNTTGILAMGVSGQNGAGKVRGSAQEGANVDLSVE 374 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 ++ + F +I +++ + E + I Sbjct: 375 FVDLMLYQRGFQGNAKVIKISDEVLNEVVNLIR 407 >gi|17988503|ref|NP_541136.1| flagellar hook protein FlgE [Brucella melitensis bv. 1 str. 16M] gi|256042866|ref|ZP_05445812.1| flagellar hook protein FlgE [Brucella melitensis bv. 1 str. Rev.1] gi|260564103|ref|ZP_05834588.1| flagellar hook protein flgE [Brucella melitensis bv. 1 str. 16M] gi|265989301|ref|ZP_06101858.1| flagellar hook protein flgE [Brucella melitensis bv. 1 str. Rev.1] gi|38257707|sp|Q8YDL6|FLGE_BRUME RecName: Full=Flagellar hook protein flgE gi|17984295|gb|AAL53400.1| flagellar hook protein flge [Brucella melitensis bv. 1 str. 16M] gi|260151746|gb|EEW86839.1| flagellar hook protein flgE [Brucella melitensis bv. 1 str. 16M] gi|262999970|gb|EEZ12660.1| flagellar hook protein flgE [Brucella melitensis bv. 1 str. Rev.1] Length = 396 Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 5/123 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M G++ A RLSTVADN++N TVG++ + +FS +V S V Sbjct: 6 MMR---TGVSGMNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAGQYNSGS-VL 61 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASG 119 + Y + G ST + D A++G+ +F ++ P G TR G F +G LV+++G Sbjct: 62 TDVRYGISDQGGIRSTSSTTDLAIDGNGYFVVQGPGGSTYLTRAGSFVPDKNGDLVNSAG 121 Query: 120 KYP 122 Y Sbjct: 122 YYL 124 Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 10/54 (18%), Positives = 22/54 (40%) Query: 186 LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + + G LE+SNA+ E+ MI + + + + + + M + Sbjct: 340 PQGDGMGKIMSGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGFELMDVLVN 393 >gi|62317957|ref|YP_223810.1| flagellar hook protein FlgE [Brucella abortus bv. 1 str. 9-941] gi|83269934|ref|YP_419225.1| flagellar hook protein FlgE [Brucella melitensis biovar Abortus 2308] gi|189023208|ref|YP_001932949.1| flagellar hook protein FlgE [Brucella abortus S19] gi|225686885|ref|YP_002734857.1| flagellar hook protein FlgE [Brucella melitensis ATCC 23457] gi|254691611|ref|ZP_05154865.1| flagellar hook protein FlgE [Brucella abortus bv. 6 str. 870] gi|254731634|ref|ZP_05190212.1| flagellar hook protein FlgE [Brucella abortus bv. 4 str. 292] gi|256112177|ref|ZP_05453098.1| flagellar hook protein FlgE [Brucella melitensis bv. 3 str. Ether] gi|256256798|ref|ZP_05462334.1| flagellar hook protein FlgE [Brucella abortus bv. 9 str. C68] gi|256261978|ref|ZP_05464510.1| trypsin inhibitor Kunitz [Brucella melitensis bv. 2 str. 63/9] gi|260544142|ref|ZP_05819963.1| trypsin inhibitor Kunitz [Brucella abortus NCTC 8038] gi|260757242|ref|ZP_05869590.1| flagellar hook protein flgE [Brucella abortus bv. 6 str. 870] gi|260759393|ref|ZP_05871741.1| flagellar hook protein flgE [Brucella abortus bv. 4 str. 292] gi|260883046|ref|ZP_05894660.1| flagellar hook protein flgE [Brucella abortus bv. 9 str. C68] gi|265993603|ref|ZP_06106160.1| flagellar hook protein flgE [Brucella melitensis bv. 3 str. Ether] gi|297250151|ref|ZP_06933852.1| flagellar hook protein flgE [Brucella abortus bv. 5 str. B3196] gi|68845076|sp|O52070|FLGE_BRUAB RecName: Full=Flagellar hook protein flgE gi|12330680|gb|AAG52877.1| FlgE [Brucella abortus] gi|62198150|gb|AAX76449.1| FlgE, flagellar hook protein [Brucella abortus bv. 1 str. 9-941] gi|82940208|emb|CAJ13264.1| Flagellar basal body rod protein:Trypsin inhibitor Kunitz [Brucella melitensis biovar Abortus 2308] gi|189021782|gb|ACD74503.1| Trypsin inhibitor Kunitz [Brucella abortus S19] gi|225642990|gb|ACO02903.1| flagellar basal body FlaE domain protein [Brucella melitensis ATCC 23457] gi|260097413|gb|EEW81287.1| trypsin inhibitor Kunitz [Brucella abortus NCTC 8038] gi|260669711|gb|EEX56651.1| flagellar hook protein flgE [Brucella abortus bv. 4 str. 292] gi|260677350|gb|EEX64171.1| flagellar hook protein flgE [Brucella abortus bv. 6 str. 870] gi|260872574|gb|EEX79643.1| flagellar hook protein flgE [Brucella abortus bv. 9 str. C68] gi|262764473|gb|EEZ10505.1| flagellar hook protein flgE [Brucella melitensis bv. 3 str. Ether] gi|263091462|gb|EEZ15998.1| trypsin inhibitor Kunitz [Brucella melitensis bv. 2 str. 63/9] gi|297174020|gb|EFH33384.1| flagellar hook protein flgE [Brucella abortus bv. 5 str. B3196] gi|326411303|gb|ADZ68367.1| flagellar hook protein FlgE [Brucella melitensis M28] gi|326554592|gb|ADZ89231.1| flagellar hook protein FlgE [Brucella melitensis M5-90] Length = 396 Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 5/123 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M G++ A RLSTVADN++N TVG++ + +FS +V S V Sbjct: 6 MMR---TGVSGMNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAGQYNSGS-VL 61 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASG 119 + Y + G ST + D A++G+ +F ++ P G TR G F +G LV+++G Sbjct: 62 TDVRYGISDQGGIRSTSSTTDLAIDGNGYFVVQGPGGSTYLTRAGSFVPDKNGDLVNSAG 121 Query: 120 KYP 122 Y Sbjct: 122 YYL 124 Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 10/54 (18%), Positives = 22/54 (40%) Query: 186 LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + + G LE+SNA+ E+ MI + + + + + + M + Sbjct: 340 PQGDGMGKIMSGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGFELMDVLVN 393 >gi|221215571|ref|ZP_03588534.1| flagellar hook protein FlgE [Burkholderia multivorans CGD1] gi|221164559|gb|EED97042.1| flagellar hook protein FlgE [Burkholderia multivorans CGD1] Length = 413 Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 63/189 (33%), Gaps = 2/189 (1%) Query: 8 GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVASGKEY 65 GL+ L + +N++N +TVGF++ +FS++ Q A Sbjct: 6 GLSGLAGASNALDVIGNNIANANTVGFKSSTAQFSDMYANSIATSVNTQIGIGTALASVQ 65 Query: 66 LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125 G+ +T + LD A+ G+ +F + + I TRDG F+ +G +V++ G + Sbjct: 66 QQFGQGTINTTNSSLDVAINGNGFFQMSNNGTITYTRDGTFQRDKNGYIVNSQGLNLMGY 125 Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185 A I + I+ T + Sbjct: 126 AADKNGVINTAQTVPLQAPTTNIAPTATTKITGQFNLNSQDTVPTKTPFDATDTTTYNYS 185 Query: 186 LEDLSGVTV 194 ++ Sbjct: 186 TSIQVYDSL 194 Score = 66.8 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 20/166 (12%), Positives = 47/166 (28%), Gaps = 6/166 (3%) Query: 80 LDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEI 139 A G F + + G + +T G + + Sbjct: 247 TPTAALGQFQFTVPNTDGSATPQTLTLDLTGTTQYGGKDGVNNLAQDGYASGTLTTFTIG 306 Query: 140 FNVGEKGEISQ-KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVT 193 + G S + V+ + L + + G V + + + + T Sbjct: 307 TDGKLTGNYSNGQTAVLGQIALANFNNPNGLVNIGGNQYAETPASGVPQISVPGSTNHGT 366 Query: 194 VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 ++ LE+SN + ++ +I + + + I + I Sbjct: 367 LQGSALENSNVDLTSQLVNLITAQRNYQANAQTIKTQQTVDQTLIN 412 >gi|308273521|emb|CBX30123.1| hypothetical protein N47_D29320 [uncultured Desulfobacterium sp.] Length = 469 Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 32/123 (26%), Positives = 52/123 (42%), Gaps = 6/123 (4%) Query: 9 LAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA---IKNDIDQKISFVASGKEY 65 ++ AL ++ + DN++N +TVGF+ +V F +V+ Q + Sbjct: 1 MSGLNALGNAMTVIGDNIANVNTVGFKESRVTFQDVLSQTVATTAGSAQVGRGTSLADIS 60 Query: 66 LSKEVGSFISTGTELDFALEGDAWFALESP---RGIILTRDGRFKVTDDGSLVSASGKYP 122 S GSF ST + D A+ G +F + P TR G F+ DG+ V+ S Sbjct: 61 SSFSQGSFESTDSSTDLAIGGAGFFMVRDPGTSNNDYYTRAGEFRFDKDGNFVNPSDYIV 120 Query: 123 VLD 125 Sbjct: 121 QGW 123 Score = 79.1 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 23/214 (10%), Positives = 58/214 (27%), Gaps = 10/214 (4%) Query: 36 TIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP 95 ++F+ G I ++ ++ G + + + + + Sbjct: 253 RGTIEFNGTSGDISGGVNSITCSLSDGAGGWTALANTDATANGGYFTFAPEFIAGSPMNV 312 Query: 96 RGIILTRDGRFKVTDDGSLVSASGK-----YPVLDMASVPIQIPQKDEIFNVGEKGEISQ 150 + TR + +D + + D V + Sbjct: 313 KLDFGTRFNGSEWANDALSTTQYASASTTVFQSADGYGAGDLQAISVATDGVITGQYSNG 372 Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNAN 205 + + + L QG + + S ++ LE SN + Sbjct: 373 QVLPLYRVALAKFQNEQGLYKVGGNLFSQTRLSGEPITGKPGGNGLGSLSPNSLEQSNVD 432 Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E +MI + + + + +I ++ + E I Sbjct: 433 LATEFVRMITTQRGYQANSKIITTIDQMLSELIN 466 >gi|254699262|ref|ZP_05161090.1| flagellar hook protein FlgE [Brucella suis bv. 5 str. 513] gi|254706497|ref|ZP_05168325.1| flagellar hook protein FlgE [Brucella pinnipedialis M163/99/10] gi|254711218|ref|ZP_05173029.1| flagellar hook protein FlgE [Brucella pinnipedialis B2/94] gi|254711818|ref|ZP_05173629.1| flagellar hook protein FlgE [Brucella ceti M644/93/1] gi|254714887|ref|ZP_05176698.1| flagellar hook protein FlgE [Brucella ceti M13/05/1] gi|256015898|ref|YP_003105907.1| flagellar hook protein [Brucella microti CCM 4915] gi|256030153|ref|ZP_05443767.1| flagellar hook protein FlgE [Brucella pinnipedialis M292/94/1] gi|256158332|ref|ZP_05456236.1| flagellar hook protein FlgE [Brucella ceti M490/95/1] gi|256252734|ref|ZP_05458270.1| flagellar hook protein FlgE [Brucella ceti B1/94] gi|260166795|ref|ZP_05753606.1| flagellar hook protein FlgE [Brucella sp. F5/99] gi|261216577|ref|ZP_05930858.1| flagellar hook protein flgE [Brucella ceti M13/05/1] gi|261219813|ref|ZP_05934094.1| flagellar hook protein flgE [Brucella ceti B1/94] gi|261313950|ref|ZP_05953147.1| flagellar hook protein flgE [Brucella pinnipedialis M163/99/10] gi|261318810|ref|ZP_05958007.1| flagellar hook protein flgE [Brucella pinnipedialis B2/94] gi|261319447|ref|ZP_05958644.1| flagellar hook protein flgE [Brucella ceti M644/93/1] gi|261749702|ref|ZP_05993411.1| flagellar hook protein flgE [Brucella suis bv. 5 str. 513] gi|261756173|ref|ZP_05999882.1| trypsin inhibitor Kunitz [Brucella sp. F5/99] gi|265987183|ref|ZP_06099740.1| flagellar hook protein flgE [Brucella pinnipedialis M292/94/1] gi|265996846|ref|ZP_06109403.1| flagellar hook protein flgE [Brucella ceti M490/95/1] gi|255998558|gb|ACU50245.1| flagellar hook protein [Brucella microti CCM 4915] gi|260918397|gb|EEX85050.1| flagellar hook protein flgE [Brucella ceti B1/94] gi|260921666|gb|EEX88234.1| flagellar hook protein flgE [Brucella ceti M13/05/1] gi|261292137|gb|EEX95633.1| flagellar hook protein flgE [Brucella ceti M644/93/1] gi|261298033|gb|EEY01530.1| flagellar hook protein flgE [Brucella pinnipedialis B2/94] gi|261302976|gb|EEY06473.1| flagellar hook protein flgE [Brucella pinnipedialis M163/99/10] gi|261736157|gb|EEY24153.1| trypsin inhibitor Kunitz [Brucella sp. F5/99] gi|261739455|gb|EEY27381.1| flagellar hook protein flgE [Brucella suis bv. 5 str. 513] gi|262551143|gb|EEZ07304.1| flagellar hook protein flgE [Brucella ceti M490/95/1] gi|264659380|gb|EEZ29641.1| flagellar hook protein flgE [Brucella pinnipedialis M292/94/1] Length = 396 Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 5/123 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M G++ A RLSTVADN++N TVG++ + +FS +V S V Sbjct: 6 MMR---TGVSGMNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAGQYNSGS-VL 61 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASG 119 + Y + G ST + D A++G+ +F ++ P G TR G F +G LV+++G Sbjct: 62 TDVRYGISDQGGIRSTSSTTDLAIDGNGYFVVQGPGGSTYLTRAGSFVPDKNGDLVNSAG 121 Query: 120 KYP 122 Y Sbjct: 122 YYL 124 Score = 69.1 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 10/54 (18%), Positives = 22/54 (40%) Query: 186 LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + + G LE+SNA+ E+ MI + + + + + + M + Sbjct: 340 PQGDGMGKIMSGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGSELMDVLVN 393 >gi|260466603|ref|ZP_05812791.1| flagellar basal body FlaE domain protein [Mesorhizobium opportunistum WSM2075] gi|259029609|gb|EEW30897.1| flagellar basal body FlaE domain protein [Mesorhizobium opportunistum WSM2075] Length = 418 Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 5/124 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M G++ A RLST ADN++N+DT G++ +FS ++ V Sbjct: 6 MMR---TGVSGMNAQANRLSTTADNIANSDTTGYKRSSAEFSTLIMPSTGGAYNSG-GVT 61 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASG 119 + + G T + D A+ GD +F ++ P G TR G F G LV+A+G Sbjct: 62 TTIRQAVSDPGVLQYTTSVSDLAVSGDGFFVVQDPSGTPYLTRAGAFVPDAQGRLVNAAG 121 Query: 120 KYPV 123 + Sbjct: 122 FQLM 125 Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 29/242 (11%), Positives = 69/242 (28%), Gaps = 22/242 (9%) Query: 20 STVADNM--SNTDTVGF--RTIKVKFS--------EVVGAIKNDIDQKISFVASGKEYLS 67 + N+ +N T + ++ V + +V +++ K Sbjct: 174 AVATANLPGANAATAQYTSKSSMVAYDNLGNKKLLDVYFTNTGTGTWQVAVFDQSKATAG 233 Query: 68 KEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMA 127 + + +P + T G + D S ++ G + A Sbjct: 234 TSFPYTGGALGTANLTFDTTTGKLTGTPTSVSFTVPGGASLNLDLSTLTQLGTGFTVSDA 293 Query: 128 SVPIQIPQKDEIFNVGEKGEISQK-----GKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 V P + + + G I + K + + L V + + Sbjct: 294 QVNGNAPSAIDKVQISKDGTIYAQYKDGTSKPLYKIPLADVQSPDQLKALPGNVYAQGTD 353 Query: 183 PTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + + ++ G LE+SN + E+ MI + + + + + M Sbjct: 354 SGAVRVGFANEGKAGSIISGALENSNVDIAEELTDMIAAQRSYTANSKVFQTGSDLMDVL 413 Query: 238 IR 239 + Sbjct: 414 VN 415 >gi|149202208|ref|ZP_01879181.1| flagellar hook protein FlgE [Roseovarius sp. TM1035] gi|149144306|gb|EDM32337.1| flagellar hook protein FlgE [Roseovarius sp. TM1035] Length = 419 Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 34/199 (17%), Positives = 76/199 (38%), Gaps = 8/199 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV--GAIKNDIDQKISFVAS 61 SF+ L+ A + +S ++N++N T+GF + +F+++ Q S Sbjct: 2 SFHTALSGLNAAQTDISVTSNNIANVGTLGFHGSRAEFADIYTTSPYSRPASQIGSGTEV 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPR----GIILTRDGRFKVTDDGSLVSA 117 + + + GS +TG LD +L+G +F + + TR G F + +G + +A Sbjct: 62 SRIGVDFKQGSLTATGNVLDLSLQGPGFFQVRTGPDAGADAGYTRAGAFGMNREGFVTNA 121 Query: 118 SGKY--PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 +G + + + + + ++ Q + S+ + G + Sbjct: 122 AGHFLTVFPTSENGDTLSTTQTQRLQIPQQFGTPQATTAVDLSFNLSLSNNGGLGAQAAI 181 Query: 176 GISPNIPPTPLEDLSGVTV 194 + P P + + Sbjct: 182 PAAAFDPADPTTYAATTQI 200 Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 9/98 (9%), Positives = 32/98 (32%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLED 201 ++ + + + + QG ++ + + T ++ G +E Sbjct: 319 YGAETSVAVGQVAVANFSDIQGLGSIGSATYRASRESGDVRLGVPGTSGFGAIRAGSVER 378 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + ++ +I + + + ++ N + Sbjct: 379 SNVDLTEQLVNLIMAQRNYQASAKALETNGTLADTVLN 416 >gi|296531742|ref|ZP_06894567.1| flagellar hook protein FlgE [Roseomonas cervicalis ATCC 49957] gi|296267925|gb|EFH13727.1| flagellar hook protein FlgE [Roseomonas cervicalis ATCC 49957] Length = 506 Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 33/185 (17%), Positives = 67/185 (36%), Gaps = 4/185 (2%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + + A +LS +++N++N+ TVG++ + +F +V + ++ V Sbjct: 4 INALRTSTSGLNAQAVKLSGISNNIANSSTVGYKRVDTQFESLVLEGSSSGSYALAGVTP 63 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII----LTRDGRFKVTDDGSLVSA 117 +VG TG + D A+ G+ + + TR G F+ G+LV++ Sbjct: 64 RNRVEISKVGQVQRTGVDTDIAVSGNGFLVVNENSDSTGKYLATRAGSFRPDAFGNLVNS 123 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177 +G Y NV ++ +A+ + + Sbjct: 124 AGFYLQGVKLGADGLPVGNLGDNNVDSLSTVNVNNISVASAPTTEMRTWFNLPKNSTGYA 183 Query: 178 SPNIP 182 SP P Sbjct: 184 SPPPP 188 Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 33/94 (35%), Gaps = 5/94 (5%) Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNAN 205 K + I + L + G ++ + T G LE SN + Sbjct: 410 KSRPIYALKLAVFPNANGLNPVSGDAYEMSLAAGAVRLIDPGTGAAGTTNGGALESSNVD 469 Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E+ +I + ++S T++ ++ + EA Sbjct: 470 IGTELTNLIETQRAYSSNATVVRTADQMLEEATN 503 >gi|306845419|ref|ZP_07477993.1| flagellar hook protein FlgE [Brucella sp. BO1] gi|306274162|gb|EFM55978.1| flagellar hook protein FlgE [Brucella sp. BO1] Length = 396 Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 5/123 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M G++ A RLSTVADN++N TVG++ + +FS +V S V Sbjct: 6 MMR---TGVSGMNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAGQYNSGS-VL 61 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASG 119 + Y + G ST + D A++G+ +F ++ P G TR G F +G LV+++G Sbjct: 62 TDVRYGISDQGGIRSTSSTTDLAIDGNGYFVVQGPGGSTYLTRAGSFVPDKNGDLVNSAG 121 Query: 120 KYP 122 Y Sbjct: 122 YYL 124 Score = 68.4 bits (165), Expect = 9e-10, Method: Composition-based stats. Identities = 10/51 (19%), Positives = 21/51 (41%) Query: 189 LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + G LE+SNA+ E+ MI + + + + + + M + Sbjct: 343 DGMGKIMSGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGSELMDVLVN 393 >gi|262276417|ref|ZP_06054226.1| flagellar hook protein FlgE [Grimontia hollisae CIP 101886] gi|262220225|gb|EEY71541.1| flagellar hook protein FlgE [Grimontia hollisae CIP 101886] Length = 435 Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 32/129 (24%), Positives = 65/129 (50%), Gaps = 6/129 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61 + NI L+ A ++ ++T ++N++N +T GF+ + +F +V A N S V + Sbjct: 2 ALNIALSGLAAAQKDMNTTSNNIANANTFGFKESRAEFGDVYSASIFSNAKTTTGSGVQT 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESP----RGIILTRDGRFKVTDDGSLVSA 117 GS I T LD + G+ +F++ + + +LTR+G F + D ++V++ Sbjct: 62 SIVAQQFHEGSSIYTNNPLDLRISGNGYFSVANDKLATQDNVLTRNGAFHLDKDNNIVNS 121 Query: 118 SGKYPVLDM 126 G++ + Sbjct: 122 EGQFLLGYN 130 Score = 66.0 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 15/120 (12%), Positives = 37/120 (30%), Gaps = 5/120 (4%) Query: 125 DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN---- 180 D A+ + + + + + + V QG + N+ Sbjct: 314 DGATTGYLAKVDIDPKGTIMATYSNGENVALGRVAMVRVSNQQGLSQAGNTQWKVTQQSG 373 Query: 181 -IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + VK G +E SN + E+ +I + F + + ++ + ++ Sbjct: 374 EAIWGEAMQGAFGKVKSGTIEQSNIDMTQELVDLITAQRNFQANSRSLEVGNQMQQTILQ 433 >gi|254994099|ref|ZP_05276289.1| flagellar hook protein FlgE [Listeria monocytogenes FSL J2-064] Length = 208 Score = 86.8 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 32/148 (21%), Positives = 59/148 (39%), Gaps = 13/148 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + ++ A +Q LS ++N++N +T G++ V F++++ + Sbjct: 1 MNQTMYTAISGMNAFQQALSVTSNNIANANTTGYKKQSVVFNDLLYQNTMGSVAGGLYAG 60 Query: 61 SGKEYL-----------SKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107 + GS +TG D AL+G +F + I+ TRDG F Sbjct: 61 TNPMSFGSGSKIGAILTDYTAGSPTATGRNKDAALQGRGFFIAGDNAGGNIVYTRDGSFA 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQ 135 V+D+ L + GKY + + Sbjct: 121 VSDNNYLTTQQGKYVMGYATDKNGNVLN 148 >gi|209963559|ref|YP_002296474.1| flagellar hook protein FlgE [Rhodospirillum centenum SW] gi|209957025|gb|ACI97661.1| flagellar hook protein FlgE [Rhodospirillum centenum SW] Length = 434 Score = 86.5 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 33/200 (16%), Positives = 73/200 (36%), Gaps = 8/200 (4%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 ++ G++ A + + ++DN+SN+ TVG++ V+FS +V + + V + Sbjct: 5 SAMYSGVSGLAAQSAKFAAISDNISNSSTVGYKRSGVQFSTLVTSASSPGSYSAGGVQAD 64 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALES--------PRGIILTRDGRFKVTDDGSL 114 G +T + D A+ G +F + + +LTR G F+V ++G+L Sbjct: 65 LHTEVSRGGIVQATNSATDMAISGRGFFVVSNRSAAVNGEAPSYMLTRSGAFRVDENGNL 124 Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174 + +G + ++ + E + + + Sbjct: 125 HNTAGYFLQGWKLGPDGKVVGGEPSRTSFTGLETVNLSSITGLAKATTQIDFAANLPASQ 184 Query: 175 SGISPNIPPTPLEDLSGVTV 194 +G +P P + Sbjct: 185 TGKTPPAQPFSTSVDYYTPL 204 Score = 75.7 bits (184), Expect = 6e-12, Method: Composition-based stats. Identities = 19/142 (13%), Positives = 45/142 (31%), Gaps = 10/142 (7%) Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG-----KVIATMG 159 + ++ G V + E +G+ G ++ + + + Sbjct: 287 NLGRPNQTGGLTQWGDDYVPTKINKDGASYAPLERVEIGDDGVMTAIYKNGLRQAVYQIP 346 Query: 160 LYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGF-----LEDSNANSMYEMGQMI 214 + V G R + + + + K G LE SN + E+ +I Sbjct: 347 VADVTNPDGLRRMDGNAFQVSRESGDYYLWDAGSGKAGAVDGAALEASNVDIAEELTSII 406 Query: 215 HLTQKFNSITTLIDENEKSMLE 236 + ++S +I ++ + E Sbjct: 407 ETQRAYSSNAKIIQTADEMLDE 428 >gi|312962588|ref|ZP_07777078.1| flagellar hook protein FlgE [Pseudomonas fluorescens WH6] gi|311283168|gb|EFQ61759.1| flagellar hook protein FlgE [Pseudomonas fluorescens WH6] Length = 437 Score = 86.5 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 33/125 (26%), Positives = 58/125 (46%), Gaps = 3/125 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--ISFVAS 61 SFNIGL+ A ++L +N++N T GF++ + +F+++ A K Q + V Sbjct: 2 SFNIGLSGLYAANKQLDVTGNNIANVATTGFKSSRAEFADIYAASKLGTGQNSIGNGVNL 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLVSASGK 120 G +G LD A++G +F + G + TR G F+ DG + + +G Sbjct: 62 AAVSQQFTQGDVNGSGGILDMAIQGGGFFVQKGSDGSLEYTRSGAFRADKDGFITNNTGT 121 Query: 121 YPVLD 125 + Sbjct: 122 SRLQG 126 Score = 70.7 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 21/128 (16%), Positives = 40/128 (31%), Gaps = 5/128 (3%) Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 P+ D + K + V +Q+ K I + L S + QG ++ Sbjct: 308 TYRNPPITDGYATGQITGLKIDGNGVMFATFSNQQSKAIGQISLASFNNEQGLQPAGSTT 367 Query: 177 ISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 + + ++ LE+SN N E+ +I + + I Sbjct: 368 WRETFASGQPGYDTPQSGTLGSIVANSLENSNVNLTNELVDLIKAQSNYQANAKTISTQS 427 Query: 232 KSMLEAIR 239 M I+ Sbjct: 428 TIMQTIIQ 435 >gi|288871078|ref|ZP_06116279.2| flagellar hook protein [Clostridium hathewayi DSM 13479] gi|288864882|gb|EFC97180.1| flagellar hook protein [Clostridium hathewayi DSM 13479] Length = 653 Score = 86.5 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 34/196 (17%), Positives = 70/196 (35%), Gaps = 13/196 (6%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------KNDIDQKISFV 59 A + +L + +N++N +T GF++ + +F +V + Q Sbjct: 1 MKAHQTKLDVIGNNIANVNTYGFKSSRARFQDVFYQTLQSAAGGDNNKGGTNASQVGYGS 60 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSAS 118 G L + STG LD A+ G+ +F +++ I TR G + + + S Sbjct: 61 QLGGIDLDMSRSALQSTGRPLDVAIAGEGFFQVMDADGNIFYTRAGNLMLDSNSGNLVDS 120 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178 Y VL ++ P+ + ++ + S T+ ++ + + Sbjct: 121 NGYTVLGVSGDPLGKAPSSDKIHLNIPTKSSGLASKTLTINGTQFTITSEKATTDANVSI 180 Query: 179 PNIPPTPLEDLSGVTV 194 L S + V Sbjct: 181 TFKAEDNLPSGSDIVV 196 Score = 76.1 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 32/98 (32%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLED 201 + I + L + + G NS + + +K LE Sbjct: 553 HPDKGKIQIGRIDLVTFENPYGLEESGNSYFRATSNSGEAKACQAGEDGTGALKTSSLEM 612 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E MI + F + + +I ++ + E + Sbjct: 613 SNVDISTEFSDMIVTQRGFQANSRIITVSDSILEELVN 650 >gi|68164546|gb|AAY87275.1| predicted flagellar hook protein [uncultured bacterium BAC17H8] Length = 1387 Score = 86.5 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 57/135 (42%), Gaps = 5/135 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG--AIKNDIDQKISFVAS 61 SF L +S ++N++N T GF+ +V+F ++ ++N S Sbjct: 2 SFYTALTGLNGSSADISATSNNIANVGTTGFKRSRVEFGDIFATSPLQNASSSIGSGTIL 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALES---PRGIILTRDGRFKVTDDGSLVSAS 118 G+ ++ LD A+ G +FAL+ + TR+G V +D +V ++ Sbjct: 62 KGIKQQFTQGNIAASLNALDLAISGQGFFALKPSLTSAQTVYTRNGSLNVNNDRYVVDSA 121 Query: 119 GKYPVLDMASVPIQI 133 G++ + + + Sbjct: 122 GQFLLTYPVNTDGSV 136 Score = 76.1 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 13/123 (10%), Positives = 35/123 (28%), Gaps = 5/123 (4%) Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 D + + + + + + + + + + G + N+ + Sbjct: 1262 VEQDGFTSGRLDGIEIDSSGTIRANYTNGQNNPLGKIVVANFNNQNGLKQIGNATYTETA 1321 Query: 182 PPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + + + G LE SN + E+ +I + F + I+ Sbjct: 1322 VSGTPQVGEAGSEGFGNILSGSLERSNVDITEELVNLITAQRNFQASAKAIETTTGLTQT 1381 Query: 237 AIR 239 I Sbjct: 1382 IIN 1384 >gi|161511182|ref|NP_777929.2| flagellar basal body rod protein FlgF [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|46395817|sp|Q89AH8|FLGF_BUCBP RecName: Full=Flagellar basal-body rod protein flgF Length = 248 Score = 86.5 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 47/245 (19%), Positives = 103/245 (42%), Gaps = 13/245 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M++ N + + + + + +A+N++N T GF+ +++ ++ + K+ Q+ +F+ Sbjct: 1 MESIVNAIITSTNKIFENQARIANNITNISTPGFK-SELELKILLPSQKDQNSQEDNFL- 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDA--WFALESPRGIILTRDGRFKVTDDGSLVSAS 118 K+Y +K G+ T LD A+ + P+ I T++G FK+ + L Sbjct: 59 -YKQYKNKNQGTLRRTNQPLDCAIIDKNDWFVIKIDPKTIAYTKNGHFKINSNRQL--TV 115 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM--SQGFVRRENSG 176 +PVL ++ + + I + + + + + + N Sbjct: 116 QNHPVLGEDGEIFIPKNENIVISSDGYINIIKNNVLQHKVAQFKLKNFDINDLTYKTNGL 175 Query: 177 ISPN----IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 N + T +++S + + G LEDSN N M +MI +KF+ ++ + Sbjct: 176 YLLNKNNKLNHTNHKNVSNIKLVSGILEDSNVNLEENMVEMISNARKFDMQIKILSMYNE 235 Query: 233 SMLEA 237 + A Sbjct: 236 NTQAA 240 >gi|296274022|ref|YP_003656653.1| fagellar hook-basal body protein [Arcobacter nitrofigilis DSM 7299] gi|296098196|gb|ADG94146.1| fagellar hook-basal body protein [Arcobacter nitrofigilis DSM 7299] Length = 487 Score = 86.5 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 30/126 (23%), Positives = 54/126 (42%), Gaps = 7/126 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M S L+ A + ++N++N +T+ + ++ F++ + V Sbjct: 1 MNGSLYNSLSGIYAASNYVDVASNNIANINTIAHKEDRISFADQMYQNG-----IGKGVG 55 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG--IILTRDGRFKVTDDGSLVSAS 118 +G S G T + DFA++G +F L P TR G F ++DG+LV+A Sbjct: 56 AGTVNKSFRQGDVKDTNNQYDFAIQGKGFFILTDPETNLTYYTRAGNFTKSNDGTLVNAQ 115 Query: 119 GKYPVL 124 G + Sbjct: 116 GLDVMG 121 Score = 65.7 bits (158), Expect = 5e-09, Method: Composition-based stats. Identities = 12/89 (13%), Positives = 28/89 (31%), Gaps = 1/89 (1%) Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPN-IPPTPLEDLSGVTVKRGFLEDSNANSMYE 209 + + Q ++ + + TV +E SN N Sbjct: 394 NTYIAGRISTAYFPDEQSLNPEGDNLYTQTKESGEAKNADTLNTVVSHSVEASNINVATA 453 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAI 238 + ++I + F + + I ++ + AI Sbjct: 454 LTKLIIAQRAFEASSKAITTSDSFLDTAI 482 >gi|23500854|ref|NP_700294.1| flagellar hook protein FlgE [Brucella suis 1330] gi|38257619|sp|Q8FUS9|FLGE_BRUSU RecName: Full=Flagellar hook protein FlgE gi|23464518|gb|AAN34299.1| flagellar hook protein FlgE [Brucella suis 1330] Length = 396 Score = 86.5 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 5/123 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M G++ A RLSTVADN++N TVG++ + +FS +V S V Sbjct: 6 MMR---TGVSGMNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAGQYNSGS-VL 61 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASG 119 + Y + G ST + D A++G+ +F ++ P G TR G F +G LV+++G Sbjct: 62 TDVRYGISDQGGIRSTSSTTDLAIDGNGYFVVQGPGGSTYLTRAGSFVPDKNGDLVNSAG 121 Query: 120 KYP 122 Y Sbjct: 122 YYL 124 Score = 68.7 bits (166), Expect = 6e-10, Method: Composition-based stats. Identities = 10/54 (18%), Positives = 22/54 (40%) Query: 186 LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + + G LE+SNA+ E+ MI + + + + + + M + Sbjct: 340 PQGDGMGKIMSGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGSELMDVLVN 393 >gi|289607949|emb|CBI60684.1| unnamed protein product [Sordaria macrospora] Length = 240 Score = 86.5 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 30/124 (24%), Positives = 52/124 (41%), Gaps = 7/124 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG-------AIKNDID 53 M + IGL+ A + L V++N+SN +T GF+ V F + ++ Sbjct: 1 MFGAIYIGLSGLNAYSKGLQQVSNNVSNLNTTGFKGSTVSFHNLYATPDRGGMSLTGQGG 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113 V L+ + G ST +LD +++G + L + R G F+V G Sbjct: 61 SAGYGVEVDDGTLNFKQGELRSTDRDLDLSVDGSGFLVLLDGDRTLYARTGSFEVDPAGF 120 Query: 114 LVSA 117 +V + Sbjct: 121 IVMS 124 >gi|269866427|ref|XP_002652270.1| flagellar hook protein flgE [Enterocytozoon bieneusi H348] gi|220062840|gb|EED41785.1| flagellar hook protein flgE [Enterocytozoon bieneusi H348] Length = 140 Score = 86.5 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 33/125 (26%), Positives = 59/125 (47%), Gaps = 3/125 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--ISFVAS 61 SFNIGL+ A ++L +N++N T GF++ + +F+++ A K Q + V Sbjct: 2 SFNIGLSGLYAANKQLDVTGNNIANVATTGFKSSRAEFADIYAASKLGTGQNSIGNGVNL 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLVSASGK 120 G ++G LD A++G +F + G + TR G F+ DG + + +G Sbjct: 62 AAVSQQFTQGDVNNSGGVLDMAIQGGGFFVQKGSDGSLEYTRSGAFRADKDGYITNNTGT 121 Query: 121 YPVLD 125 + Sbjct: 122 SRLQG 126 >gi|153001472|ref|YP_001367153.1| flagellar hook protein FlgE [Shewanella baltica OS185] gi|160876203|ref|YP_001555519.1| flagellar hook protein FlgE [Shewanella baltica OS195] gi|217972598|ref|YP_002357349.1| flagellar hook protein FlgE [Shewanella baltica OS223] gi|151366090|gb|ABS09090.1| flagellar basal body FlaE domain protein [Shewanella baltica OS185] gi|160861725|gb|ABX50259.1| flagellar basal body FlaE domain protein [Shewanella baltica OS195] gi|217497733|gb|ACK45926.1| flagellar basal body FlaE domain protein [Shewanella baltica OS223] gi|315268393|gb|ADT95246.1| fagellar hook-basal body protein [Shewanella baltica OS678] Length = 453 Score = 86.5 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 37/125 (29%), Positives = 62/125 (49%), Gaps = 5/125 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61 SFNI L+ A ++ L+T A+N++N +T+GF+ + +F++V N VA+ Sbjct: 2 SFNIALSGISAAQKDLNTTANNIANANTIGFKESRAEFADVYANSIFSNSKTAVGGGVAT 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII---LTRDGRFKVTDDGSLVSAS 118 + GS T LD A++G +F S G + TR G FKV + +V ++ Sbjct: 62 SQVAQQFHQGSLQLTSNSLDMAIKGGGFFVTASEIGSLDHSFTRAGAFKVDSNNYMVDSA 121 Query: 119 GKYPV 123 G + Sbjct: 122 GNFLQ 126 Score = 64.9 bits (156), Expect = 8e-09, Method: Composition-based stats. Identities = 16/123 (13%), Positives = 39/123 (31%), Gaps = 5/123 (4%) Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 D +V + + + +A + L QG + N+ ++ Sbjct: 329 LTQDGTTVGRLTNVEIGADGLITASYSNGSSVPLARVALVRFANEQGLTQVGNTSWKASL 388 Query: 182 PPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 P + ++ LE SN + E+ +I + F + + ++ N Sbjct: 389 NSGPALAGEANSGTFGSISSSALEQSNIDLTTELVDLISAQRNFQANSRTLEVNNTLQQT 448 Query: 237 AIR 239 ++ Sbjct: 449 VLQ 451 >gi|71906391|ref|YP_283978.1| flagellar hook protein FlgE [Dechloromonas aromatica RCB] gi|71846012|gb|AAZ45508.1| Flagellar basal body rod protein:Protein of unknown function DUF1078:Flagellar basal body FlaE [Dechloromonas aromatica RCB] Length = 442 Score = 86.5 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 34/190 (17%), Positives = 70/190 (36%), Gaps = 2/190 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61 +F GL+ + L ++N++N TVGF++ F++V A Q V++ Sbjct: 2 AFQQGLSGLNTSSKALDVTSNNIANASTVGFKSASTHFADVYAASLAGGGASQVGIGVSA 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 G+ +T LD AL G+ +F + + TR+G+F + G +V+ + + Sbjct: 62 SAIAQQFTQGNITTTSNSLDIALNGNGFFRMTQDGAVRYTRNGQFHLDSTGYIVNDNKEN 121 Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 A +I + IS + + G+ + + + Sbjct: 122 LTGYAADAQGKIVASTPSGIKVDTAPISPQATGATSDGVRFSLNLNSTDKVPGTAWTSPT 181 Query: 182 PPTPLEDLSG 191 + + Sbjct: 182 GTNVPDTSTY 191 Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 28/224 (12%), Positives = 65/224 (29%), Gaps = 17/224 (7%) Query: 26 MSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALE 85 ++N T G +V + + + + S +T L L Sbjct: 224 LANPTTTG-------AWDVHYQVDGTSEANVGGSPLRMTFDSTGAYLAPTTPATLAVNLN 276 Query: 86 GDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEK 145 G A + + + + + G + + + +G+ Sbjct: 277 GVATNLSTPANVVTNSATSPLSFAMNFAGSTQYGSDFAIASKTQDGYASGQLSSLTIGDN 336 Query: 146 GEISQ-----KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP-----LEDLSGVTVK 195 G I + + +A + L + G + N+ + ++ Sbjct: 337 GVIQGVYSNGQTRNMAQIVLANFQNPNGLMSIGNNDYIETADSGQSMIGTPNTGTFGVLQ 396 Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G +EDSN + E+ MI + + + I ++ M + Sbjct: 397 SGAVEDSNVDLTAELVNMIVQQRNYQANAQSIKTQDQIMQTLVN 440 >gi|254695093|ref|ZP_05156921.1| flagellar hook protein FlgE [Brucella abortus bv. 3 str. Tulya] gi|261215444|ref|ZP_05929725.1| flagellar hook protein flgE [Brucella abortus bv. 3 str. Tulya] gi|260917051|gb|EEX83912.1| flagellar hook protein flgE [Brucella abortus bv. 3 str. Tulya] Length = 396 Score = 86.5 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 5/123 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M G++ A RLSTVADN++N TVG++ + +FS +V S V Sbjct: 6 MMR---TGVSGMNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAGQYNSGS-VL 61 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASG 119 + Y + G ST + D A++G+ +F ++ P G TR G F +G LV+++G Sbjct: 62 TDVRYGISDQGGIRSTSSTTDLAIDGNGYFVVQGPGGSTYLTRAGSFVPDKNGDLVNSAG 121 Query: 120 KYP 122 Y Sbjct: 122 YYL 124 Score = 66.8 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 10/54 (18%), Positives = 22/54 (40%) Query: 186 LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + + G LE+SNA+ E+ MI + + + + + + M + Sbjct: 340 PQGDGMGKIMSGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGFELMDVLVN 393 >gi|221199739|ref|ZP_03572782.1| flagellar basal body protein FlaE [Burkholderia multivorans CGD2M] gi|221208656|ref|ZP_03581656.1| flagellar basal body protein FlaE [Burkholderia multivorans CGD2] gi|221171467|gb|EEE03914.1| flagellar basal body protein FlaE [Burkholderia multivorans CGD2] gi|221179978|gb|EEE12382.1| flagellar basal body protein FlaE [Burkholderia multivorans CGD2M] Length = 413 Score = 86.5 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 63/189 (33%), Gaps = 2/189 (1%) Query: 8 GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVASGKEY 65 GL+ L + +N++N +TVGF++ +FS++ Q A Sbjct: 6 GLSGLAGASNALDVIGNNIANANTVGFKSSTAQFSDMYANSIATSVNTQIGIGTALASVQ 65 Query: 66 LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125 G+ +T + LD A+ G+ +F + + I TRDG F+ +G +V++ G + Sbjct: 66 QQFGQGTINTTNSSLDVAINGNGFFQMSNNGTITYTRDGTFQRDKNGYIVNSQGLNLMGY 125 Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185 A I + I+ T + Sbjct: 126 AADKNGVINTAQTVPLQAPTTNIAPTATTKITGQFNLNSQDTVPTKTPFDATDTTTYNYS 185 Query: 186 LEDLSGVTV 194 ++ Sbjct: 186 TSIQVYDSL 194 Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 20/166 (12%), Positives = 47/166 (28%), Gaps = 6/166 (3%) Query: 80 LDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEI 139 A G F + + G + +T G + + Sbjct: 247 TPTAALGQFQFTVPNTDGSATPQTLTLDLTGTTQYGGKDGVNNLAQDGYASGTLTTFTIG 306 Query: 140 FNVGEKGEISQ-KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVT 193 + G S + V+ + L + + G V + + + + T Sbjct: 307 TDGKLTGNYSNGQTAVLGQIALANFNNPNGLVNIGGNQYAETAASGVPQISVPGSTNHGT 366 Query: 194 VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 ++ LE+SN + ++ +I + + + I + I Sbjct: 367 LQGSALENSNVDLTSQLVNLITAQRNYQANAQTIKTQQTVDQTLIN 412 >gi|13472592|ref|NP_104159.1| flagellar hook protein FlgE [Mesorhizobium loti MAFF303099] gi|14023338|dbj|BAB49945.1| flagellar hook protein; FlgE [Mesorhizobium loti MAFF303099] Length = 418 Score = 86.5 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 36/124 (29%), Positives = 56/124 (45%), Gaps = 5/124 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M G++ A RLST ADN++N+DT G++ +FS ++ V Sbjct: 6 MMR---TGVSGMNAQANRLSTTADNIANSDTTGYKRSSAEFSTLIMPSTGGAYNSG-GVT 61 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASG 119 + + G T + D A+ GD +F ++ P G LTR G F G LV+A+G Sbjct: 62 TTIRQAVSDPGVLQYTTSVSDLAVSGDGFFVVQDPSGTPFLTRAGAFVPDAQGRLVNAAG 121 Query: 120 KYPV 123 + Sbjct: 122 FQLM 125 Score = 81.5 bits (199), Expect = 9e-14, Method: Composition-based stats. Identities = 30/241 (12%), Positives = 69/241 (28%), Gaps = 22/241 (9%) Query: 21 TVADNM--SNTDTVGF--RTIKVKFS--------EVVGAIKNDIDQKISFVASGKEYLSK 68 A N+ +N T + ++ V + +V +++ K Sbjct: 175 VAAANLPGANASTAQYTSKSSMVAYDNLGNKKLLDVYFTNTGTGTWQVAVFDQSKATPGT 234 Query: 69 EVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMAS 128 + + +P + T G + D S ++ G + A Sbjct: 235 SFPYTGGALGTANLTFDTTTGKLTGAPTSVSFTVPGGASLNLDLSKLTQLGTGFTVSDAQ 294 Query: 129 VPIQIPQKDEIFNVGEKGEISQK-----GKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183 V P + + + G I + K + + L V + + Sbjct: 295 VNGNAPSTIDKVQISKDGTIYAQYKDGSTKPLYKIPLADVQSPDQLKALPGNVYAQGTDS 354 Query: 184 TPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 + + ++ G LE+SN + E+ MI + + + + + M + Sbjct: 355 GAIRVGFANEGKAGSIISGALENSNVDIAEELTDMIAAQRSYTANSKVFQTGSDLMDVLV 414 Query: 239 R 239 Sbjct: 415 N 415 >gi|295700205|ref|YP_003608098.1| fagellar hook-basal body protein [Burkholderia sp. CCGE1002] gi|295439418|gb|ADG18587.1| fagellar hook-basal body protein [Burkholderia sp. CCGE1002] Length = 383 Score = 86.5 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 35/167 (20%), Positives = 71/167 (42%), Gaps = 3/167 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVAS 61 S+ GL+ A L + +N++N TVGF+ FS++ +Q VA+ Sbjct: 2 SYQTGLSGLHAASNDLDVIGNNIANAHTVGFKQGTAVFSDMYANAMLGATNNQIGIGVAT 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 G+ TG LD + G+ +F L + +R+G+F+ DG+++S+ Sbjct: 62 SAIVRDFSEGTPTQTGNPLDLDIRGNGFFLLSQNGTPVYSRNGQFQQDSDGNIISSGNGL 121 Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 P++ A P + + + + + + +S +++ G Sbjct: 122 PLMGYAEGPNGVVDTSRLVQLTTATVANLPPMPTSAIA-WSFNLNAG 167 >gi|78776232|ref|YP_392547.1| hypothetical protein Suden_0031 [Sulfurimonas denitrificans DSM 1251] gi|78496772|gb|ABB43312.1| conserved hypothetical protein [Sulfurimonas denitrificans DSM 1251] Length = 430 Score = 86.5 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 4/129 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M +F G+ + + + +ADN++NT T+GFR +FS + + + + Sbjct: 2 MIQAFYTGINGIKSHQTSIDVIADNLANTSTLGFRGYTAEFSSLFEKSLSTTADINAGIG 61 Query: 61 SGKEYLSKEVGSFIST----GTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVS 116 G + + + T D A+ GD WF ++ + TRDG F + LV+ Sbjct: 62 LGSRVNAITMNDSVGTLQLSERSTDMAIMGDGWFGIQGEGSPLYTRDGSFTFDRERDLVT 121 Query: 117 ASGKYPVLD 125 A G Y + Sbjct: 122 ADGYYVLGT 130 Score = 55.6 bits (132), Expect = 5e-06, Method: Composition-based stats. Identities = 12/132 (9%), Positives = 35/132 (26%), Gaps = 8/132 (6%) Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 + + + I ++ +Y + R S Sbjct: 296 NPFSGSSTSNGTQSGELQGYDINKNAQIVATFSNGMQSAIGSVAVYHFQNDKALERAGGS 355 Query: 176 GISPNIPPTPLEDLSGVT--------VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 S + + LE SN + ++I + + +++ + I Sbjct: 356 RFSESTNSGKPIFFKDANGKNIVGTDLSNFKLEGSNVRMEVALTEIIVMQRSYDANSKCI 415 Query: 228 DENEKSMLEAIR 239 ++ + +A+ Sbjct: 416 TTADQMLQKALS 427 >gi|229592130|ref|YP_002874249.1| flagellar hook protein FlgE [Pseudomonas fluorescens SBW25] gi|229363996|emb|CAY51545.1| putative flagellar hook protein [Pseudomonas fluorescens SBW25] Length = 434 Score = 86.5 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 3/125 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--ISFVAS 61 SFNIGL+ A ++L +N++N T GF++ + +FS++ A K Q + V Sbjct: 2 SFNIGLSGLYAANKQLDVTGNNIANVATTGFKSSRAEFSDIYAASKLGTGQNSIGNGVNL 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLVSASGK 120 G ++G LD A++G +F + G + TR G F+ DG + + +G Sbjct: 62 AAVSQQFTQGDVNNSGGVLDMAIQGGGFFVQKGSDGSLEYTRSGAFRADKDGYITNNTGT 121 Query: 121 YPVLD 125 + Sbjct: 122 SRLQG 126 Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 21/128 (16%), Positives = 39/128 (30%), Gaps = 5/128 (3%) Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + P D + K + V +Q+ K I + L S + QG + Sbjct: 305 SYRNPPTTDGYATGQITGLKIDGSGVLFATFSNQQSKAIGQISLASFNNEQGLQPSGGTT 364 Query: 177 ISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 + + ++ LE+SN N E+ +I + + I Sbjct: 365 WRETFASGQPGYDTPQAGTLGSIVANSLENSNVNLTNELVDLIKAQSNYQANAKTISTQS 424 Query: 232 KSMLEAIR 239 M I+ Sbjct: 425 TIMQTIIQ 432 >gi|254251191|ref|ZP_04944509.1| flagellar hook protein FlgE [Burkholderia dolosa AUO158] gi|124893800|gb|EAY67680.1| flagellar hook protein FlgE [Burkholderia dolosa AUO158] Length = 413 Score = 86.5 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 30/135 (22%), Positives = 56/135 (41%), Gaps = 2/135 (1%) Query: 8 GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVASGKEY 65 GL+ L + +N++N +TVGF++ +FS++ Q Sbjct: 6 GLSGLAGASSALDVIGNNIANANTVGFKSSTAQFSDMYANSIATSVNTQIGIGTTLASVQ 65 Query: 66 LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125 G+ +T + LD A+ G+ +F + + I TRDG F+ +G +V++ G + Sbjct: 66 QQFAQGTINTTNSSLDVAINGNGFFQMSNNGVITYTRDGTFQRDKNGYIVNSQGMNLMGY 125 Query: 126 MASVPIQIPQKDEIF 140 A I + Sbjct: 126 AAGANGVINTAQTVP 140 Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 11/98 (11%), Positives = 32/98 (32%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLED 201 + + V+ + + + + G V + + + T++ LE+ Sbjct: 315 YSNGQTAVLGQIAIANFNNPNGLVAIGGNQFVETAASGVPQISAPGSTNHGTLQGSALEN 374 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + ++ +I + + + I + I Sbjct: 375 SNVDLTSQLVNLITAQRNYQANAQTIKTQQTVDQTLIN 412 >gi|323699248|ref|ZP_08111160.1| fagellar hook-basal body protein [Desulfovibrio sp. ND132] gi|323459180|gb|EGB15045.1| fagellar hook-basal body protein [Desulfovibrio desulfuricans ND132] Length = 541 Score = 86.1 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 31/177 (17%), Positives = 59/177 (33%), Gaps = 16/177 (9%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID---------- 53 S +G +A Q +S +A+N++N +T+G++ + F +++ Sbjct: 5 SMYVGATGVIAHSQGMSVLANNLANVNTIGYKRSDILFGDLISQQVATGGALYDNGDVRI 64 Query: 54 -QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-----LTRDGRFK 107 Q VA G+ T D A+ G +F + P G I TR G F+ Sbjct: 65 NQMGMGVAVSAIRGIFTEGALSETTEATDLAISGQGFFGVNDPSGTIRGASHYTRAGDFR 124 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 ++ LV++ G ++ G+ + Sbjct: 125 FDNEAYLVNSEGYRLQGFAYDRETGEWATAVSDVQLPYEDVDVDGQTARVVRSQPFA 181 Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 31/99 (31%), Gaps = 5/99 (5%) Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLE 200 + + + + + +Y + G R + + + LE Sbjct: 440 HFTNGQTEELYQVAVYKFNSPWGLRRDGGTNFVATEASGTAMVGTAGDRGRGIINQNSLE 499 Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +SN + E MI + + + T +I + + I Sbjct: 500 ESNVDMSTEFSNMILTQRGYQANTKVITTADSMLNTLIS 538 >gi|304310787|ref|YP_003810385.1| Flagellar basal body FlaE [gamma proteobacterium HdN1] gi|301796520|emb|CBL44728.1| Flagellar basal body FlaE [gamma proteobacterium HdN1] Length = 447 Score = 86.1 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 5/135 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV--GAIKNDIDQKISFVAS 61 SFNI ++ A + L ++N++N T GF+ + +F ++ GA + S V Sbjct: 2 SFNIAISGLKAAQSDLEVTSNNIANVATTGFKKSRAEFGDIYATGAFGSTKTAIGSGVLL 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESP---RGIILTRDGRFKVTDDGSLVSAS 118 G+ T LDF + G+ +F + I TR G F V DG++V++S Sbjct: 62 QAVSQQFNQGNMNFTQNTLDFGVSGEGFFVMSPNIGSSERIYTRAGAFGVNADGNVVNSS 121 Query: 119 GKYPVLDMASVPIQI 133 + + + + Sbjct: 122 DQLLQVFPVNEDGTV 136 Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 17/125 (13%), Positives = 35/125 (28%), Gaps = 5/125 (4%) Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 D S+ + + + + + + + L QG + N+ Sbjct: 321 NTLTQDGFSIGRLTGIEVDDSGLVRAAYSNGQTVSVGKVALARFPNPQGLSQIGNTSWKE 380 Query: 180 NIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 T ++ G LE SN + E+ +I + F + I+ Sbjct: 381 TSASGEALAGEAGTSSYGLIRAGALEVSNVDLTTELVGLITAQRNFQANAKSIETTNTVT 440 Query: 235 LEAIR 239 I Sbjct: 441 NAIIN 445 >gi|77463652|ref|YP_353156.1| flagellar hook protein FlgE [Rhodobacter sphaeroides 2.4.1] gi|77388070|gb|ABA79255.1| flagellar hook protein FlgE [Rhodobacter sphaeroides 2.4.1] Length = 423 Score = 86.1 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 45/201 (22%), Positives = 79/201 (39%), Gaps = 10/201 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--ISFVAS 61 S N L+ A + ++ + N++N T+GFR + +F++V + I + S V + Sbjct: 2 SINTALSGLSAAQHDIAATSHNIANVGTIGFRGSRAEFADVFNSSPYSISRTAVGSGVQT 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESP-------RGIILTRDGRFKVTDDGSL 114 + + GS ++TG LD A+EG +FA E I TR G F + +G Sbjct: 62 LRTAMQFSQGSVVATGNTLDLAIEGQGFFATEPAVGPNSAKPEPIYTRAGAFGLNAEGVA 121 Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174 ++ASG+ + SV + ++ V + SVD+ Sbjct: 122 INASGQKLLAWPVSVEGDALSQVPGSATPLTIPLTMGSPVGTSTVALSVDLPTDNAMLGT 181 Query: 175 SGISPNIPPT-PLEDLSGVTV 194 P P + + V Sbjct: 182 QAAVPPAAAFDPADPTTYAAV 202 Score = 75.7 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 27/214 (12%), Positives = 64/214 (29%), Gaps = 13/214 (6%) Query: 35 RTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDF--ALEGDAW-FA 91 + V+ + N + + ++ E + D AL G + Sbjct: 211 KGNAVEAAAYFIKTANPTAGNPQTDWAVRLVVAGEPLTPAQGDLTFDATGALSGGTGALS 270 Query: 92 LESPRGIILTRDGR-FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ 150 + G T D ++ D V+ + A +++ ++ G Sbjct: 271 FTAASGSSYTLDLTETQLADRSFEVNTVSQDGKSASALTSLEVDASGTVWAAYGAGSPVA 330 Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNAN 205 G+V+ L + Q + SG + ++ G LE +N + Sbjct: 331 MGQVV----LVTFANPQALRQLGASGFAATADSGQPVAGTAGDSGFGIIRAGALEHANVD 386 Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E+ +I + + + ++ + M + Sbjct: 387 LTEELVHLITAQRNYQASAKAMETSNSLMQTIMN 420 >gi|90415318|ref|ZP_01223252.1| flagellar hook protein FlgE [marine gamma proteobacterium HTCC2207] gi|90332641|gb|EAS47811.1| flagellar hook protein FlgE [marine gamma proteobacterium HTCC2207] Length = 944 Score = 86.1 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 30/123 (24%), Positives = 56/123 (45%), Gaps = 3/123 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG--AIKNDIDQKISFVAS 61 SF L A +L+ ++N++N+ T GF+ F ++ ++ V+ Sbjct: 2 SFYTSLTGLNAATTQLAVTSNNIANSGTGGFKRSDTDFGDIFATSPLEKASSVVGRGVSL 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGK 120 + G+ + LD A+ GD +F LES G I TR+G F + + +V+++G+ Sbjct: 62 KEVSQEFSQGNIEFSANSLDLAITGDGFFPLESSDGTKIYTRNGAFMLNEQNQMVNSAGQ 121 Query: 121 YPV 123 Sbjct: 122 ALQ 124 Score = 72.2 bits (175), Expect = 6e-11, Method: Composition-based stats. Identities = 12/90 (13%), Positives = 29/90 (32%), Gaps = 5/90 (5%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYE 209 + + L + +G + ++ T++ G E SN + E Sbjct: 852 LGKIILANFATPKGLRQVGDTSYYATSVSGDANLGEPGAAGFGTIRAGARERSNVDLTAE 911 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + +I + F + I+ + I+ Sbjct: 912 LVDLITAQRNFQANAKAIETSSSLTQTIIQ 941 >gi|297569153|ref|YP_003690497.1| fagellar hook-basal body protein [Desulfurivibrio alkaliphilus AHT2] gi|296925068|gb|ADH85878.1| fagellar hook-basal body protein [Desulfurivibrio alkaliphilus AHT2] Length = 806 Score = 86.1 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 26/208 (12%), Positives = 55/208 (26%), Gaps = 6/208 (2%) Query: 38 KVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG 97 ++ + V D +++F + + G + G Sbjct: 596 RLVIRDRVADPGGDEASQLNFRIMAYTDMEEIFGPADMDDFGDFHVISGSPERNGSQTGT 655 Query: 98 IILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI-A 156 + R G + ++S + G S ++ A Sbjct: 656 AVDNRFGDTEAMFTTQYANSSTTIYQDQNGFAAGFLQSVSVDTAGIITGNFSNGQVLMQA 715 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMG 211 + L QG + + T + LE SN + E Sbjct: 716 KVALADFANLQGLHKVGGNIFRATTQSGAPVTGEPGTNGLGEIAPNSLEMSNVDLGTEFV 775 Query: 212 QMIHLTQKFNSITTLIDENEKSMLEAIR 239 +MI + F + + +I ++ + E I Sbjct: 776 KMITTQRGFQANSKMITTTDEMLNELIN 803 Score = 83.4 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 34/185 (18%), Positives = 61/185 (32%), Gaps = 6/185 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---DIDQKISFVA 60 S G++ + +S + DN++N +TV F + + F +V+ + Q V Sbjct: 6 SLYAGISGLSTMGNGMSVLGDNIANVNTVAFNSSRSTFQDVLSQSVSTAAGTAQVGRGVT 65 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG---IILTRDGRFKVTDDGSLVSA 117 GSF ST T D A+ G+ +F L + TR G F+ G L S Sbjct: 66 LTTVDGLFAQGSFESTSTPTDMAIGGEGFFMLRGGDSAEADMFTRAGEFRFDQHGFLTSP 125 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177 G + + ++ + + I + + Q Sbjct: 126 GGHFVQGWSVDKNTGQIEGTIGDIRMDRSTPPVQTEQIDLIVNLDARVDQASASTLYDSW 185 Query: 178 SPNIP 182 + Sbjct: 186 NGTAD 190 >gi|229017042|ref|ZP_04173962.1| Flagellar hook protein flgE [Bacillus cereus AH1273] gi|229023223|ref|ZP_04179734.1| Flagellar hook protein flgE [Bacillus cereus AH1272] gi|228738148|gb|EEL88633.1| Flagellar hook protein flgE [Bacillus cereus AH1272] gi|228744313|gb|EEL94395.1| Flagellar hook protein flgE [Bacillus cereus AH1273] Length = 407 Score = 86.1 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 31/197 (15%), Positives = 65/197 (32%), Gaps = 13/197 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49 M + + A + LS ++N++N TVG++ K F +++ Sbjct: 1 MIKALYTSITGLNATQNALSVTSNNIANAQTVGYKKQKAMFDDLLYNNSIGAKGDDRYAG 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107 + + V G+ TG ++ A+EG+ +F + TR G F Sbjct: 61 TNPKSIGNGVKMSGTVTDYSDGTITLTGGKVQAAMEGNGFFVVGDSKAGNMEFTRKGTFA 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 ++ D + + G+Y A I + S G + + G+ ++ Sbjct: 121 ISSDYYITNTGGQYVFAYPADPSTGNVDLSGIPGPLQIPMGSAIGGIRTSKGIVGGNIPA 180 Query: 168 GFVRRENSGISPNIPPT 184 + + Sbjct: 181 DAKHITQELPAYDDAGN 197 Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 12/93 (12%), Positives = 30/93 (32%), Gaps = 5/93 (5%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYE 209 + + + G ++ N + L V+ G E +N + E Sbjct: 315 AGQLAVGMLPNEGGLMKTGNGNFTATNTTGILALGVSGQNGAGKVRGGAQEGANVDLSVE 374 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 ++ + F +I +++ + E + I Sbjct: 375 FVDLMLYQRGFQGNAKVIKISDEVLTEVVNLIR 407 >gi|304409978|ref|ZP_07391597.1| fagellar hook-basal body protein [Shewanella baltica OS183] gi|307302309|ref|ZP_07582067.1| fagellar hook-basal body protein [Shewanella baltica BA175] gi|304351387|gb|EFM15786.1| fagellar hook-basal body protein [Shewanella baltica OS183] gi|306914347|gb|EFN44768.1| fagellar hook-basal body protein [Shewanella baltica BA175] Length = 453 Score = 85.7 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 38/125 (30%), Positives = 62/125 (49%), Gaps = 5/125 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61 SFNI L+ A ++ L+T A+N++N +T+GF+ + +F++V N VA+ Sbjct: 2 SFNIALSGIAAAQKDLNTTANNIANANTIGFKESRAEFADVYANSIFSNAKTAVGGGVAT 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII---LTRDGRFKVTDDGSLVSAS 118 + GS T LD A++G +F S G + TR G FKV + +V ++ Sbjct: 62 SQVAQQFHQGSLQLTSNSLDMAIKGGGFFVTSSELGTLDHSFTRAGAFKVDSNNYMVDSA 121 Query: 119 GKYPV 123 G Y Sbjct: 122 GNYLQ 126 Score = 62.2 bits (149), Expect = 6e-08, Method: Composition-based stats. Identities = 13/90 (14%), Positives = 32/90 (35%), Gaps = 5/90 (5%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYE 209 +A + L QG + N+ ++ + ++ LE SN + E Sbjct: 362 LARVALVRFANEQGLTQVGNTSWKASLASGQALAGEANSGTFGSISSSALEQSNIDLTTE 421 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + +I + F + + ++ N ++ Sbjct: 422 LVDLISAQRNFQANSRTLEVNNTLQQTILQ 451 >gi|283852232|ref|ZP_06369505.1| protein of unknown function DUF1078 [Desulfovibrio sp. FW1012B] gi|283572458|gb|EFC20445.1| protein of unknown function DUF1078 [Desulfovibrio sp. FW1012B] Length = 518 Score = 85.7 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 37/200 (18%), Positives = 77/200 (38%), Gaps = 8/200 (4%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI----DQKIS 57 T+ G++ L+ Q ++ ++N++NT+TVG+++ ++ F++++ + Q Sbjct: 1 MTAIWTGVSGMLSYSQGIANTSNNLANTNTVGYKSSRMLFADMISELAGSTTDTNSQIGM 60 Query: 58 FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR---GIILTRDGRFKVTDDGSL 114 V G +S VG+ + +D A++G+ + TR G F DG L Sbjct: 61 GVQVGTVSMSTGVGAIATGDQSMDMAIDGEHGYFTVKDPVSDKTYYTRAGDFNFNTDGYL 120 Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174 VS +G + Q + +V + ++ I + G V Sbjct: 121 VSPTGNRVQGWAVDQAA-VTQAERTGSVLPEVPVTGDPTDIRITDFTLPAQATGSVSMIT 179 Query: 175 SGISPNIPPTPLEDLSGVTV 194 + S P ++ Sbjct: 180 NLDSLTDPGILDATDPYCSM 199 Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 23/143 (16%), Positives = 45/143 (31%), Gaps = 7/143 (4%) Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 TR+ T S+ + D + + V + + K + + L Sbjct: 374 TRNAVACTTS--YATSSYTQAQSQDGFASGTLNSTSVDENGVVSGTFSNGQTKDLYVLAL 431 Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIH 215 R N+ +S + + LE SN + EM +I Sbjct: 432 ADFRNPTDLRREGNNLLSATTESGAATTGRANSGIYDGISGYSLESSNVDMATEMVNLIT 491 Query: 216 LTQKFNSITTLIDENEKSMLEAI 238 L + F S + ++ + M +A+ Sbjct: 492 LQRAFQSNSKVVTTADTMMEKAL 514 >gi|297183504|gb|ADI19634.1| flagellar hook protein flge [uncultured delta proteobacterium HF0770_45N15] Length = 494 Score = 85.7 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 26/125 (20%), Positives = 47/125 (37%), Gaps = 5/125 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV---GAIKNDIDQKISFVA 60 S G + + + +N+SN +T GF+ + F +++ + + V Sbjct: 6 SLQTGASGVKTYGKAMQVTGNNISNVNTFGFKRNIIAFEDLLGNDYPQGRSFTKVSNGVK 65 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESP--RGIILTRDGRFKVTDDGSLVSAS 118 G + G+ ST D A+ G +F + P TR+G+ DG L + Sbjct: 66 IGSVEMEVSQGALESTQLTTDLAIAGGGYFTVIDPSTSNEYFTRNGQMSYDKDGFLATPR 125 Query: 119 GKYPV 123 G Sbjct: 126 GYRVQ 130 Score = 81.1 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 24/208 (11%), Positives = 55/208 (26%), Gaps = 10/208 (4%) Query: 40 KFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTEL---DFALEGDAWFALESPR 96 F G + D D + G +P Sbjct: 286 SFEAQPGGVGPDGQPLPGGPPRLIPQPVDPETGVPQFAVPFNGEDPIVLGLHLGDGFNPD 345 Query: 97 GIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156 R G +T + + + I + + G S + I Sbjct: 346 DPTDPRTGLDGITQFAGKYNVVEASADGNGSGNLESIFVEADGTVTGVF--DSGYNRPIG 403 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMG 211 + L D + + ++ + + T ++ LE SN + E Sbjct: 404 RIILTKFDNAGKLAQLGDNLLVETLSSGKKVTGEPGTAGFGEIRSQMLEQSNVDLSLEFV 463 Query: 212 QMIHLTQKFNSITTLIDENEKSMLEAIR 239 +MI + F + + +++ +++ + Sbjct: 464 KMIESQRAFQANAKTVTTSDEMIVDLVN 491 >gi|126462484|ref|YP_001043598.1| flagellar basal body FlaE domain-containing protein [Rhodobacter sphaeroides ATCC 17029] gi|126104148|gb|ABN76826.1| flagellar basal body FlaE domain protein [Rhodobacter sphaeroides ATCC 17029] Length = 423 Score = 85.7 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 45/201 (22%), Positives = 79/201 (39%), Gaps = 10/201 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--ISFVAS 61 S N L+ A + ++ + N++N T+GFR + +F++V + I + S V + Sbjct: 2 SINTALSGLSAAQHDIAATSHNIANVGTIGFRGSRAEFADVFNSSPYSISRTAVGSGVQT 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESP-------RGIILTRDGRFKVTDDGSL 114 + + GS ++TG LD A+EG +FA E I TR G F + +G Sbjct: 62 LRTAMQFSQGSVVATGNTLDLAIEGQGFFATEPAVGPNSAKPEPIYTRAGAFGLNAEGVA 121 Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174 ++ASG+ + SV + ++ V + SVD+ Sbjct: 122 INASGQKLLAWPVSVEGDALSQVPGSATPLTIPLTMGSPVGTSTVALSVDLPTDNAMLGT 181 Query: 175 SGISPNIPPT-PLEDLSGVTV 194 P P + + V Sbjct: 182 QAAVPPAAAFDPADPTTYAAV 202 Score = 75.7 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 27/214 (12%), Positives = 64/214 (29%), Gaps = 13/214 (6%) Query: 35 RTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDF--ALEGDAW-FA 91 + V+ + N + + ++ E + D AL G + Sbjct: 211 KGNAVEAAAYFIKTANPTAGNPQTDWAVRLVVAGEPLTPAQGDLTFDATGALSGGTGALS 270 Query: 92 LESPRGIILTRDGR-FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ 150 + G T D ++ D V+ + A +++ ++ G Sbjct: 271 FTAASGNSYTLDLTETQLADRSFEVNTVSQDGKSASALTSLEVDASGTVWAAYGAGSPVA 330 Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNAN 205 G+V+ L + Q + SG + ++ G LE +N + Sbjct: 331 MGQVV----LVTFANPQALRQLGASGFAATADSGQPVAGTAGDSGFGIIRAGALEHANVD 386 Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E+ +I + + + ++ + M + Sbjct: 387 LTEELVHLITAQRNYQASAKAMETSNSLMQTIMN 420 >gi|307823531|ref|ZP_07653760.1| fagellar hook-basal body protein [Methylobacter tundripaludum SV96] gi|307735516|gb|EFO06364.1| fagellar hook-basal body protein [Methylobacter tundripaludum SV96] Length = 597 Score = 85.7 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 32/134 (23%), Positives = 57/134 (42%), Gaps = 18/134 (13%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVAS 61 SF L+ A L +N++N+ TVGF+ + +F++V + + Q S V Sbjct: 2 SFATALSGLQAASTNLQVTGNNIANSQTVGFKESRAEFADVYASSIGGVSKTQPGSGVKV 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWF----------------ALESPRGIILTRDGR 105 + + G+ T LD AL G+ +F ++ TR+G Sbjct: 62 TEVAQQFKDGTIDPTSNSLDLALSGNGFFVLADTVNLPDPANPTAPVDPSVPTSYTRNGA 121 Query: 106 FKVTDDGSLVSASG 119 FK+ G++V++ G Sbjct: 122 FKLDSSGNVVNSQG 135 Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 11/93 (11%), Positives = 32/93 (34%), Gaps = 5/93 (5%) Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANS 206 K + + L +Q + ++ + + T++ LE S + Sbjct: 504 SKTLGQVALARFQSNQSLAKLGDTAWAKTSSSGAPIYGAAGDNNFGTIQSSALESSTVDL 563 Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 ++ ++I Q + + + I + + +R Sbjct: 564 SAQLVKLIIAQQAYQANSQTITTEKTLVETILR 596 >gi|146277708|ref|YP_001167867.1| flagellar basal body FlaE domain-containing protein [Rhodobacter sphaeroides ATCC 17025] gi|145555949|gb|ABP70562.1| flagellar basal body FlaE domain protein [Rhodobacter sphaeroides ATCC 17025] Length = 423 Score = 85.7 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 44/174 (25%), Positives = 74/174 (42%), Gaps = 9/174 (5%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--ISFVAS 61 S N L+ A + ++ + N++N T+GFR + +F++V + I + S V + Sbjct: 2 SINTALSGLSAAQHDIAATSHNIANVGTIGFRGSRAEFADVFNSSPYSIARTAVGSGVQT 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESP-------RGIILTRDGRFKVTDDGSL 114 + + GS ++TG LD A+EG +FA E I TR G F + D G Sbjct: 62 LRTAMQFSQGSVVATGNTLDLAIEGQGFFATEPAVGPNSAKPEPIYTRAGAFGLNDKGVA 121 Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 V+ASG+ + SV + V ++ V +VD+ Sbjct: 122 VNASGQKLLAWPVSVEGDALSQVPGTAVPLTIPLTMGSPVGTKAVRMTVDLPTD 175 Score = 76.1 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 25/214 (11%), Positives = 63/214 (29%), Gaps = 13/214 (6%) Query: 35 RTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFA---LEGDAWFA 91 + V+ + +N + + ++ E + D G + Sbjct: 211 KGNAVEAAAYFIKTENPAAGSPDTGWAVRLVVAGETLTPAEGDLAFDATGALAGGTGSLS 270 Query: 92 LESPRGIILTRDGRFKV-TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ 150 + G T D T+ V+ + A +++ ++ G+ Sbjct: 271 FTTGIGTPYTLDLTGTALTNRSFEVNTVNQDGKSAAALTSLEVDASGTVWAAYGAGDSVA 330 Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNAN 205 G+V+ L + Q + SG + ++ G LE +N + Sbjct: 331 MGQVV----LVTFANPQALRQLGASGFAATADSGQPVAGTAGDSGFGIIRAGALEHANVD 386 Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E+ +I + + + ++ + M + Sbjct: 387 LTEELVHLITAQRNYQASAKAMETSNSLMQTIMN 420 >gi|153011508|ref|YP_001372722.1| flagellar hook protein FlgE [Ochrobactrum anthropi ATCC 49188] gi|151563396|gb|ABS16893.1| flagellar basal body FlaE domain protein [Ochrobactrum anthropi ATCC 49188] Length = 426 Score = 85.7 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 5/131 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M G++ A RLS VADN++N TVG++ + +FS +V S V Sbjct: 35 MMR---TGVSGMNAQANRLSAVADNIANASTVGYKRAETQFSSLVLPSTGGQYNSGS-VL 90 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASG 119 + Y + G ST + D A++G+ +F ++ + LTR G F +G+LV+++G Sbjct: 91 TDVRYGISDQGGIRSTSSTTDLAIDGNGYFVVQGADGSTFLTRAGSFVPDKNGNLVNSAG 150 Query: 120 KYPVLDMASVP 130 Y + + P Sbjct: 151 YYLLGAGPNDP 161 Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 24/193 (12%), Positives = 54/193 (27%), Gaps = 8/193 (4%) Query: 47 AIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106 +KN D + + + + G +D G L R G + Sbjct: 239 TVKNAADDAVVGGPTTLTFDPTTGDMTSAGGVAVDLGPYGGQNLNLNLGASTQ--RAGDY 296 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 ++ + V + ++ + + + + Sbjct: 297 TISQA-----QINGQAPSAVKGVDVANDGSVVAIYENGTQKVLARIPLANVASPDRMTVV 351 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 G V ++ P + V G LE+SNA+ E+ MI + + + + + Sbjct: 352 SGNVFLPSADSGDVRLGFP-QSDGMGKVMSGTLEESNADIAQELTDMIEAQRSYTANSKV 410 Query: 227 IDENEKSMLEAIR 239 + M + Sbjct: 411 FQTGSELMDVLVN 423 >gi|90579909|ref|ZP_01235717.1| flagellar hook protein [Vibrio angustum S14] gi|90438794|gb|EAS63977.1| flagellar hook protein [Vibrio angustum S14] Length = 467 Score = 85.7 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 35/131 (26%), Positives = 61/131 (46%), Gaps = 6/131 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61 S NI L+ A ++ L+T ++N++N +T GF+ + +F +V N V + Sbjct: 2 SMNIALSGLGAAQKDLNTTSNNIANANTFGFKESRAEFGDVYSNSIFSNAKTTTGGGVQT 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFAL----ESPRGIILTRDGRFKVTDDGSLVSA 117 GS I T LD + G +FA+ P LTR+G F + ++ LV++ Sbjct: 62 STVAQQFHEGSSIYTNNPLDLRVSGSGFFAVADNKNEPANNNLTRNGAFHLNNENELVNS 121 Query: 118 SGKYPVLDMAS 128 GK+ + + Sbjct: 122 EGKFLLGYPVN 132 Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 47/146 (32%), Gaps = 7/146 (4%) Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK--VIATM 158 T+ D SA D+ K +I G GK V+ + Sbjct: 320 TQSLTMNYDDPTQYASAFEVRKFQDVDGATTGYLSKVDIDPEGNILASYSNGKDIVVGRV 379 Query: 159 GLYSVDMSQGFVRRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQM 213 L V QG + + + S +VK G LE SN + E+ + Sbjct: 380 ALARVSNEQGLAQLGGTLWNTTQESGQAIWGDASQGSFGSVKSGTLEQSNIDMTQELVDL 439 Query: 214 IHLTQKFNSITTLIDENEKSMLEAIR 239 I + F + + +D N + ++ Sbjct: 440 ITAQRNFQASSRALDVNNQLQQNILQ 465 >gi|74317652|ref|YP_315392.1| flagellar hook protein FlgE [Thiobacillus denitrificans ATCC 25259] gi|74057147|gb|AAZ97587.1| flagellar hook protein FlgE [Thiobacillus denitrificans ATCC 25259] Length = 405 Score = 85.7 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 34/193 (17%), Positives = 68/193 (35%), Gaps = 2/193 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA--IKNDIDQKISFVAS 61 SF GL+ A + L + +N+SN TVGF+ + +F++V V Sbjct: 2 SFQQGLSGLNAAAKNLDVIGNNVSNASTVGFKQSQAQFADVYANSLTGAGGSSIGIGVKV 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 + G+ ST LD A+ G +F +++ I R+G+F++ +G +V+ +G Sbjct: 62 AQVAQQFTQGNITSTNNPLDMAINGGGFFRMDNGGEIAYQRNGQFQLDKNGYIVNPTGGK 121 Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 A+ + +++ + L P Sbjct: 122 LTGYTANASGVLSTGAPAPLAINTADLTPQATSEVNAVLNLDSTGTALPAASFDMNDPTT 181 Query: 182 PPTPLEDLSGVTV 194 + ++ Sbjct: 182 YHSSTAASVYDSL 194 Score = 72.6 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 12/98 (12%), Positives = 32/98 (32%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLED 201 + + V+ + L + G + N+ + + ++ +ED Sbjct: 306 YTNGQSAVLGQVVLANFANPNGLQQMGNNLWTETATSGTPLVGTPDSGGLGVLQSSAVED 365 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ MI + + + I + + + Sbjct: 366 SNVDLTAELVNMITAQRVYQANAQTIKSQDAVLQTLVN 403 >gi|95928662|ref|ZP_01311409.1| protein of unknown function DUF1078-like [Desulfuromonas acetoxidans DSM 684] gi|95135452|gb|EAT17104.1| protein of unknown function DUF1078-like [Desulfuromonas acetoxidans DSM 684] Length = 425 Score = 85.7 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 31/128 (24%), Positives = 61/128 (47%), Gaps = 6/128 (4%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA-- 60 ++ G++ + +S +N+SN++T+G+++ FS+++ A + ++ V Sbjct: 5 STLYSGISGLQTNAEAMSVTGNNISNSNTIGYKSSSTVFSDMLSATISTTGTSVNQVGRG 64 Query: 61 --SGKEYLSKEVGSFISTGTELDFALEGDAWFALESP--RGIILTRDGRFKVTDDGSLVS 116 + GSF ST ++ D A+EG +F L + ++ TR+G F G LV+ Sbjct: 65 SELTTVRSNFSQGSFQSTSSDTDLAVEGAGFFMLSAAGTDEVVYTRNGAFHFDPGGYLVN 124 Query: 117 ASGKYPVL 124 A G Sbjct: 125 ADGYRVQG 132 Score = 84.1 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 23/146 (15%), Positives = 50/146 (34%), Gaps = 4/146 (2%) Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 T+ + +++ D + + V + + + IAT+ L Sbjct: 280 TQSIAIEFDTTQFGRTSTVYSQDQDGYAAGEVVETSINSDGVVSVSYSNGETRDIATLTL 339 Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT----VKRGFLEDSNANSMYEMGQMIHL 216 + G V+ NS S + + + + LE SN + E MI + Sbjct: 340 ATFTNPGGLVKEGNSLYSASRYSGNPQIGTPGASQGIIYTNSLELSNVDLSQEFVDMITI 399 Query: 217 TQKFNSITTLIDENEKSMLEAIRNIA 242 +++ + +I ++ + E I I Sbjct: 400 QNGYSANSKVITTTDEMLQEVINLIR 425 >gi|222084885|ref|YP_002543414.1| flagellar hook protein [Agrobacterium radiobacter K84] gi|221722333|gb|ACM25489.1| flagellar hook protein [Agrobacterium radiobacter K84] Length = 425 Score = 85.7 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 40/199 (20%), Positives = 79/199 (39%), Gaps = 5/199 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 S ++ A RL+TV+DN++N+ T G++ FS +V + + V + Sbjct: 6 SMKTAISGMNAQANRLATVSDNIANSSTTGYKQASTSFSSLVLPSSSG-NYNSGGVETTV 64 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122 Y + G+ +T + D A++G+ +F ++S LTR G F G+LV+A+G Sbjct: 65 RYAISQQGTVSATTSSTDLAIQGNGFFVVQSAAGQTFLTRSGDFSADASGNLVNAAGFTL 124 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM---SQGFVRRENSGISP 179 + ++ + + V AT + ++G P Sbjct: 125 MGYSSASGAPSVVVNGFSGMVPINVTPSGTSVAATTVGSMTGNLNSNATIATSSSTGYLP 184 Query: 180 NIPPTPLEDLSGVTVKRGF 198 + P+ + + G+ Sbjct: 185 SENTYPVTTDTSKSSITGY 203 Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats. Identities = 16/144 (11%), Positives = 39/144 (27%), Gaps = 5/144 (3%) Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 T+ +T + + +D + K + + L Sbjct: 279 TQSIAMDMTGFTQVATDFSATGKMDGQAPNPVTSVTIAKDGTVSAVYKDSSTKELYRIPL 338 Query: 161 YSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIH 215 +V + S N + ++ G LE+SN + E+ MI Sbjct: 339 ATVASPDSLTLESGNVYSANGDSGVTVTGWPQSGGLGYIQSGALEESNVDLATELTNMIT 398 Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239 + + + + + + + Sbjct: 399 AQKSYTANSKVFQAGSDLLDVLVN 422 >gi|229109210|ref|ZP_04238809.1| Flagellar hook protein flgE [Bacillus cereus Rock1-15] gi|228674220|gb|EEL29465.1| Flagellar hook protein flgE [Bacillus cereus Rock1-15] Length = 406 Score = 85.7 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 63/181 (34%), Gaps = 13/181 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49 M + + A + LS ++N++N TVG++ K F +++ Sbjct: 1 MIKALYTSITGMNATQNALSVTSNNIANAQTVGYKKQKAMFDDLLYNNSIGAKADDKYAG 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107 + + V G+ TG + A+EG+ +F + TR G F Sbjct: 61 TNPKSIGNGVKLSGTVTDYSDGTITLTGGKTQAAMEGNGFFVVGDSKGGNMEFTRKGTFG 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 ++ D + + G+Y A+ I + + G + + G+ ++ Sbjct: 121 ISSDYYITNTEGQYVFAYPANEATGEVDLSGIPGPLQIPMGTAIGGIRTSKGVVGGNIPA 180 Query: 168 G 168 Sbjct: 181 D 181 Score = 62.6 bits (150), Expect = 5e-08, Method: Composition-based stats. Identities = 11/93 (11%), Positives = 29/93 (31%), Gaps = 5/93 (5%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYE 209 + + G ++ N + L + V+ E +N + E Sbjct: 314 AGQLAVAMFPNEGGLMKTGNGNYTATNTTGILALGASGQNGAGKVRGSAQEGANVDLSVE 373 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 ++ + F +I +++ + E + I Sbjct: 374 FVDLMLYQRGFQGNAKVIKVSDEVLNEVVNLIR 406 >gi|229058387|ref|ZP_04196771.1| Flagellar hook protein flgE [Bacillus cereus AH603] gi|228719896|gb|EEL71486.1| Flagellar hook protein flgE [Bacillus cereus AH603] Length = 407 Score = 85.7 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 63/181 (34%), Gaps = 13/181 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49 M + + A + LS ++N++N TVG++ K F +++ Sbjct: 1 MIKALYTSITGMNATQNALSVTSNNIANAQTVGYKKQKAMFDDLLYNNSIGAKADDKYAG 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107 + + V G+ TG + A+EG+ +F + TR G F Sbjct: 61 TNPKSIGNGVKLSGTVTDYSDGTITLTGGKTQAAMEGNGFFVVGDSKGGNMEFTRKGTFA 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 ++ D + + G+Y A+ I + + G + + G+ ++ Sbjct: 121 ISSDYYITNTEGQYVFAYPANAATGEVDLSGIPGPLQIPMGTAIGGIRTSKGVVGGNIPA 180 Query: 168 G 168 Sbjct: 181 D 181 Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 11/93 (11%), Positives = 30/93 (32%), Gaps = 5/93 (5%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYE 209 + + G ++ N + L + ++ G E +N + E Sbjct: 315 AGQLAVAMFPNEGGLMKTGNGNYTATNTTGILALGASGQNGAGKIRGGAQEGANVDLSVE 374 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 ++ + F +I +++ + E + I Sbjct: 375 FVDLMLYQRGFQGNAKVIKISDEVLNEVVNLIR 407 >gi|27904201|gb|AAO27034.1| flagellar basal-body rod protein FlgF [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 262 Score = 85.7 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 47/245 (19%), Positives = 103/245 (42%), Gaps = 13/245 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M++ N + + + + + +A+N++N T GF+ +++ ++ + K+ Q+ +F+ Sbjct: 15 MESIVNAIITSTNKIFENQARIANNITNISTPGFK-SELELKILLPSQKDQNSQEDNFL- 72 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDA--WFALESPRGIILTRDGRFKVTDDGSLVSAS 118 K+Y +K G+ T LD A+ + P+ I T++G FK+ + L Sbjct: 73 -YKQYKNKNQGTLRRTNQPLDCAIIDKNDWFVIKIDPKTIAYTKNGHFKINSNRQL--TV 129 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM--SQGFVRRENSG 176 +PVL ++ + + I + + + + + + N Sbjct: 130 QNHPVLGEDGEIFIPKNENIVISSDGYINIIKNNVLQHKVAQFKLKNFDINDLTYKTNGL 189 Query: 177 ISPN----IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 N + T +++S + + G LEDSN N M +MI +KF+ ++ + Sbjct: 190 YLLNKNNKLNHTNHKNVSNIKLVSGILEDSNVNLEENMVEMISNARKFDMQIKILSMYNE 249 Query: 233 SMLEA 237 + A Sbjct: 250 NTQAA 254 >gi|223039214|ref|ZP_03609504.1| flagellar hook protein [Campylobacter rectus RM3267] gi|222879575|gb|EEF14666.1| flagellar hook protein [Campylobacter rectus RM3267] Length = 543 Score = 85.7 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 48/134 (35%), Gaps = 7/134 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI----KNDIDQKI 56 M S G++ + A N++N + VG+ +F + N+ Q Sbjct: 1 MVRSLYNGVSGVKTQSFSMDVWAHNIANINNVGYTASIPEFKSIFYQTSFKAGNNPTQDQ 60 Query: 57 SFVASGKEYL---SKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113 + + + G + T LD A+ G +F + + TR G F V D Sbjct: 61 VGLGATGMTTALSFYKQGPLMKTDNVLDMAIGGKGFFGVTNGMDTYYTRAGSFGVNKDRY 120 Query: 114 LVSASGKYPVLDMA 127 LV+ G Y + Sbjct: 121 LVTNQGNYVLGTQN 134 Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 22/137 (16%), Positives = 45/137 (32%), Gaps = 10/137 (7%) Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV--IATMGLYSVDMSQGF 169 G +A K + V I + + G G+V +A + LY QG Sbjct: 403 GVTSTAQAKSISIAQDGVREGILKDYYTNDSGNILAQFTNGQVRSVAKVALYHFQNEQGL 462 Query: 170 VRRENSGISPNIPPTPLEDLSGV--------TVKRGFLEDSNANSMYEMGQMIHLTQKFN 221 + ++ S + + LE SN + + ++I + ++ Sbjct: 463 AKMGDNIYSQSANSGAAFFYKDAGGKSIYGAKIASNTLEQSNVDLAQALTEIIVTQKAYD 522 Query: 222 SITTLIDENEKSMLEAI 238 + I + + + AI Sbjct: 523 ANAKSITTSNEMLQRAI 539 >gi|163758031|ref|ZP_02165119.1| flagellar hook protein E [Hoeflea phototrophica DFL-43] gi|162284320|gb|EDQ34603.1| flagellar hook protein E [Hoeflea phototrophica DFL-43] Length = 419 Score = 85.7 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 5/128 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M G + A RL TVADNM+N +T G++ +FS ++ + V Sbjct: 6 MMR---TGASGMNAQANRLGTVADNMANANTTGYKRASAEFSSLILP-GSAGSYNSGAVT 61 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASG 119 + Y + G+ T ++ D AL+G +F + G LTR G F +G LV+A+G Sbjct: 62 TDVRYSISQAGALEFTSSKTDMALDGSGFFIVTDDNGLPFLTRAGSFVPDGEGFLVNAAG 121 Query: 120 KYPVLDMA 127 + Sbjct: 122 FRLMGYNY 129 Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 11/51 (21%), Positives = 19/51 (37%) Query: 189 LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S V G LE SN + E+ MI + + + + + M + Sbjct: 366 GSFGKVVSGALESSNVDIAEELTDMIAAQRSYTANSKVFQTGSDLMEVLVN 416 >gi|206896319|ref|YP_002246665.1| flagellar hook protein FlgE [Coprothermobacter proteolyticus DSM 5265] gi|206738936|gb|ACI18014.1| flagellar hook protein FlgE [Coprothermobacter proteolyticus DSM 5265] Length = 221 Score = 85.7 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 37/243 (15%), Positives = 73/243 (30%), Gaps = 22/243 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + I A L+ A N+SN +T F+ ++ S + + + V Sbjct: 1 MVELYGIARAGMRLSVGYLNVAAFNISNVNTEAFKALEPVESSGNAHEFPVANGRANIVD 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + + + T A+F + LTR G F++ DG+ VS G Sbjct: 61 NAYLFTVNRDNMGPLSNTSGYALTNPQAYFVITDGTNRWLTRKGNFELDRDGN-VSLQGF 119 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 Y + +V + E I + Sbjct: 120 YVMNRDGAVAKATDLYSGNLLLVEADTSQYDRDSIG---------------------FVS 158 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 + ++ + LE SN + EM ++I + + ++ + +I Sbjct: 159 TGQERIINVDEAGLTANALEMSNVDLSAEMVKLIAAQRAYQFSAKAFRNADELIEASINL 218 Query: 241 IAS 243 + Sbjct: 219 RGA 221 >gi|327192294|gb|EGE59259.1| flagellar hook protein FlgE [Rhizobium etli CNPAF512] Length = 483 Score = 85.7 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 42/163 (25%), Positives = 69/163 (42%), Gaps = 2/163 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 S ++ A RLSTV+DN++N +TVG++ + FS +V + + V + Sbjct: 59 SMKTAVSGMSAQANRLSTVSDNIANANTVGYKAVSTSFSSLVLPSSSG-NYNSGGVQTSV 117 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGKYP 122 E G T + D A+ GD +F +ES G +LTR G F V DG+LV+++G Sbjct: 118 RQAISEQGDISYTTSAYDLAISGDGFFIVESADGTPVLTRAGDFSVDSDGNLVNSAGYTL 177 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 + + + + IA+ Y Sbjct: 178 MGYSYDSGVPAVVVNGFDGLVPVNVAQSGLSAIASTSAYFSGN 220 Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 13/73 (17%), Positives = 27/73 (36%), Gaps = 1/73 (1%) Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 G V N + P + +++ G LE SN + E+ +MI + + + + + Sbjct: 409 SGNVYTANGRSGVTVTGFPQTNG-LGSIQSGALESSNVDLAGELTEMIEAQRSYTANSKV 467 Query: 227 IDENEKSMLEAIR 239 M + Sbjct: 468 FQTGSDIMDVLVN 480 >gi|330880522|gb|EGH14671.1| flagellar hook protein FlgE [Pseudomonas syringae pv. glycinea str. race 4] Length = 390 Score = 85.7 bits (210), Expect = 6e-15, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 52/134 (38%), Gaps = 4/134 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA----IKNDIDQKISFV 59 SFNIGL+ A + L +N++N T GF++ + +F++ + Sbjct: 2 SFNIGLSGLYAANKSLDVTGNNIANVATTGFKSSRAEFADQYAQSIRGTSGQTNVGSGVT 61 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119 + + T LD A+ G+ +F L + + TR G F +G +V++ G Sbjct: 62 TAAVSQQFSQGNLTTGTANSLDLAINGNGFFMLSNNGEKLYTRAGAFHTDKEGYVVNSGG 121 Query: 120 KYPVLDMASVPIQI 133 + Sbjct: 122 MKLQGYNVDANGSV 135 >gi|239628984|ref|ZP_04672015.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239519130|gb|EEQ58996.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 541 Score = 85.7 bits (210), Expect = 6e-15, Method: Composition-based stats. Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 14/132 (10%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------KNDIDQKISFV 59 A + +L + +N++N +T GF++ + +F +V + Q Sbjct: 1 MQAHQTKLDVIGNNIANVNTYGFKSSRARFQDVYYQTLQSATSGDNNRGGTNASQVGYGA 60 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVT-DDGSLVSA 117 L+ E + STG +D A+ G+ +F ++S I TR G ++ G+LV A Sbjct: 61 QLAGIDLNMERSALQSTGRPMDVAITGEGFFQVMDSDGNIFYTRAGNLQLDYKSGNLVDA 120 Query: 118 SGKYPVLDMASV 129 +G + Sbjct: 121 NGYTVLGVTGDP 132 Score = 74.1 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 25/144 (17%), Positives = 43/144 (29%), Gaps = 11/144 (7%) Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 +RD ++G L A V I E + I + L Sbjct: 401 SRDLGLGSKAFTLTDGSAGGTVSLSDAGVTILANGIIEANHPNLG------KIQIGRIDL 454 Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIH 215 + D G NS + + +K LE SN + E MI Sbjct: 455 VTFDNPYGLEGVGNSYFKATGNSGDAKACKAGEDGTGALKTSSLEMSNVDISTEFADMIV 514 Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239 + F + + +I ++ + E + Sbjct: 515 TQRGFQANSRIITVSDSILEELVN 538 >gi|27464952|gb|AAN63049.1| flagellar component FlgE [Vibrio vulnificus] Length = 434 Score = 85.3 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 76/207 (36%), Gaps = 13/207 (6%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA--IKNDIDQKISFVASGK 63 + L+ A + L+T ++N++N +T GF+ + +F +V + N V + + Sbjct: 3 YVSLSGLSAAQLDLNTTSNNIANANTYGFKESRAEFGDVYSNSLVTNAKTTPGGGVQANQ 62 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWF----ALESPRGIILTRDGRFKVTDDGSLVSASG 119 GS I T +D + G +F P LTR+G F ++ D +V+A+ Sbjct: 63 VAQQFHEGSSIYTNNPMDLRISGTGFFAVAKDRMVPNQNELTRNGAFHLSKDNYMVTAND 122 Query: 120 KYPVLDMASV------PIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRE 173 +Y + + + G+ + S + ++ Q F + Sbjct: 123 EYLLGYQVDPLSGDVASYEPQPLNIPAEFGKPKQTSNVTVGVNLPARGALKDPQAFDFED 182 Query: 174 NSGISPNIPPTPLE-DLSGVTVKRGFL 199 + + T + + +L Sbjct: 183 PDTYNRSTSSTIYDLMGQSYKLTTYYL 209 Score = 69.5 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 21/145 (14%), Positives = 47/145 (32%), Gaps = 6/145 (4%) Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ-KGKVIATMG 159 T+ F + + + + + + D N G S + + + Sbjct: 288 TQTIAFDLNSSTQFAAPFELTKFDEDGATTGFLTKVDIDENGSVYGTYSNGENVTLGRVA 347 Query: 160 LYSVDMSQGFVRRENSGISPNIP-----PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMI 214 L V QG ++ + + S TV G LE SN + E+ +I Sbjct: 348 LVRVPNEQGLDKKGGTQWNSTNNSGDKIWGESNKGSFGTVSSGALEQSNIDMTQELVDLI 407 Query: 215 HLTQKFNSITTLIDENEKSMLEAIR 239 + F + + ++ + + ++ Sbjct: 408 SAQRNFQANSRALEVHNQLQQNILQ 432 >gi|171059412|ref|YP_001791761.1| hypothetical protein Lcho_2731 [Leptothrix cholodnii SP-6] gi|170776857|gb|ACB34996.1| protein of unknown function DUF1078 domain protein [Leptothrix cholodnii SP-6] Length = 501 Score = 85.3 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 31/134 (23%), Positives = 62/134 (46%), Gaps = 3/134 (2%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ--KISFVASG 62 F GL+ A + L + +N++N +T G + + +F+++ + N+I V Sbjct: 3 FQQGLSGLNATSKNLEVIGNNVANANTYGTKASRAEFADMYASTINNIGTGNVGIGVQVA 62 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKY 121 GS +T LD A+ G +F ++ + TR+G+FK+ +G +V+ SG+ Sbjct: 63 AVSQQFTQGSLSATDNPLDMAINGAGFFQVKDTAGNQLYTRNGQFKLDKEGFIVNNSGQK 122 Query: 122 PVLDMASVPIQIPQ 135 + A+ + Sbjct: 123 LLGYPANADGVVVP 136 Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 12/90 (13%), Positives = 29/90 (32%), Gaps = 5/90 (5%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSNANSMYE 209 + + + QG + + + + ++ G LEDSN + E Sbjct: 410 AGQIEVANFRNPQGLQAVGGNAWASTFASGSATVGTPDSGNFGQLQSGSLEDSNVDLTAE 469 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + MI + + + I + + + Sbjct: 470 LVNMITAQRVYQANAQTIKTQDSVLQTLVN 499 >gi|307546968|ref|YP_003899447.1| flagellar hook protein FlgE [Halomonas elongata DSM 2581] gi|307218992|emb|CBV44262.1| flagellar hook protein FlgE [Halomonas elongata DSM 2581] Length = 422 Score = 85.3 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 16/129 (12%), Positives = 44/129 (34%), Gaps = 5/129 (3%) Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 ++ + D + + E + +++ + + L S +G ++ Sbjct: 292 TSRASDLIQDGYTSGSLVGISIEDDGTIVRNYTNEQSRPAGQVSLASFRNPEGLDPVGDN 351 Query: 176 GISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + + T ++ G +E SN + E+ MI + + + + I Sbjct: 352 AWAATAASGQELVGAPGTGQLGGIQSGVVESSNVDMAQELVDMIVTQRAYQANSQTIKTQ 411 Query: 231 EKSMLEAIR 239 ++ + AI Sbjct: 412 DEVLQTAIN 420 Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats. Identities = 35/185 (18%), Positives = 70/185 (37%), Gaps = 5/185 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 F+ L+ A L + +N++N+ TVGF+ F++V K + K+S V Sbjct: 2 GFSQALSGLNAASSSLDVLGNNIANSQTVGFKGSDTLFADVYANSKVGLGTKVSRVL--- 58 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPV 123 G+ STG LD + G+ + + ++ +R+G+ +T DG L +A G + Sbjct: 59 --QDFGEGNLESTGRNLDLGISGEGFLRFQQNGEVVYSRNGQLSMTADGYLENAQGARLM 116 Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183 + Q+ + + E ++D + + + Sbjct: 117 GFGVNDAGQVQTGGQPSVLQVSAEEMAASATTDVATTLNLDSREAVGEQLDQVDVTTDMS 176 Query: 184 TPLED 188 P + Sbjct: 177 DPANN 181 >gi|229172400|ref|ZP_04299959.1| Flagellar hook protein FlgE [Bacillus cereus MM3] gi|228610871|gb|EEK68134.1| Flagellar hook protein FlgE [Bacillus cereus MM3] Length = 441 Score = 85.3 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 29/197 (14%), Positives = 64/197 (32%), Gaps = 13/197 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49 M + + A + LS ++N++N T G++ K F +++ Sbjct: 1 MIKALYTSITGMSATQNALSVTSNNIANAQTAGYKKQKAIFDDLLYNNTVGSRGDGSYAG 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF--ALESPRGIILTRDGRFK 107 + + + GS TG +++ A+EG+ F + + TR G F Sbjct: 61 TNPKSIGNGLKFSGTATDFSDGSITLTGEKMETAIEGNGLFLVGDRNGGNVEYTRKGSFG 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 V+ D + + G+Y + Q + + + G + ++S+ Sbjct: 121 VSADNFITATGGQYVLGYGVKPGTQEVDFSSQPSAIKLPVGTAIGGSVTDKATLGGNLSR 180 Query: 168 GFVRRENSGISPNIPPT 184 + Sbjct: 181 NQSDLSTDFTIYDDEGN 197 Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 20/144 (13%), Positives = 43/144 (29%), Gaps = 9/144 (6%) Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 G G ++A+ + I + G + KV+ + + + Sbjct: 302 GGLTNYPTGKTITATDVAGRPAAIANDYSISDGGFVMMRYSDGSM----KVVGQLAVATF 357 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 S G ++ N V+ G E SN + E ++ + Sbjct: 358 PNSGGLMKSGNGNYIATPSSGIPAIGVAGENGAGNVRGGAKESSNVDLSVEFVDLMLYQR 417 Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242 F +I +++ + E + I Sbjct: 418 GFQGNAKVIKVSDEVLNEVVNLIR 441 >gi|302670255|ref|YP_003830215.1| flagellar hook protein FlgE2 [Butyrivibrio proteoclasticus B316] gi|302394728|gb|ADL33633.1| flagellar hook protein FlgE2 [Butyrivibrio proteoclasticus B316] Length = 572 Score = 85.3 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 24/138 (17%), Positives = 49/138 (35%), Gaps = 18/138 (13%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M S ++ + + + +N++N +T +++ F +V+ Sbjct: 1 MMRSLWSAVSGLQTHQLEMDVIGNNIANVNTTSYKSQATGFQDVLYQTIKTGTAGNGVKG 60 Query: 61 SGK-------------EYLSKEVGSFISTGTELDFALEGDAWFAL-----ESPRGIILTR 102 S + GS +T D + GD++F + + TR Sbjct: 61 STSADQVGLGAKMGSININITKPGSAQTTYNPFDLMITGDSFFVVSESQNSPNQEKYFTR 120 Query: 103 DGRFKVTDDGSLVSASGK 120 DG F + +GSLV+ + Sbjct: 121 DGSFTIDAEGSLVTQNNG 138 Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 16/116 (13%), Positives = 40/116 (34%) Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 + I I I+ G+ + +++ ++ + + + ++ Sbjct: 450 NKGYPNGDMNGITISDNGSIYAKYSNGQDVKLAQIVVAEFNNAMGLEKAGDNVYKASLNS 509 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 P G + G LE SN + E MI + F + + +I +++ + Sbjct: 510 GEPIYMDITEDGGYMSSGVLEASNVDLAKEFTDMITTQRGFQANSRVITTSDELLQ 565 >gi|170703096|ref|ZP_02893916.1| flagellar basal body FlaE domain protein [Burkholderia ambifaria IOP40-10] gi|170131993|gb|EDT00501.1| flagellar basal body FlaE domain protein [Burkholderia ambifaria IOP40-10] Length = 413 Score = 85.3 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 31/189 (16%), Positives = 62/189 (32%), Gaps = 2/189 (1%) Query: 8 GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVASGKEY 65 GL+ L + +N++N +TVGF++ +FS++ Q Sbjct: 6 GLSGLAGASNALDVIGNNIANANTVGFKSSTAQFSDMYANSIATSVNTQIGIGTGLASVQ 65 Query: 66 LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125 G+ +T + LD A+ G+ +F + + +RDG F+ +G +V + G+ + Sbjct: 66 QQFGQGTINTTNSSLDVAINGNGFFQMSNNGVTTYSRDGTFQRDKNGFIVDSQGRNLMGY 125 Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185 A I + I+ T + S Sbjct: 126 TAGSGGVINTAQTVPLQAPTTNIAPTATTKITGQFNLNSQDTVPTKTPFSATDSTTYNYS 185 Query: 186 LEDLSGVTV 194 ++ Sbjct: 186 TSIQVYDSL 194 Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 12/125 (9%), Positives = 36/125 (28%), Gaps = 5/125 (4%) Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 D + + + V+ + L + + G V + + Sbjct: 288 NNLAQDGYASGTLTTYSIGADGKLTGNYSNGQTAVLGQIALANFNNPNGLVNLGGNQYAE 347 Query: 180 NIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 + + + + ++ LE+SN + ++ +I + + + I + Sbjct: 348 SSASGVPQISAPGSTNHGVLQGSALENSNVDLTSQLVNLITAQRNYQANAQTIKTQQTVD 407 Query: 235 LEAIR 239 I Sbjct: 408 QTLIN 412 >gi|172061972|ref|YP_001809624.1| flagellar hook protein FlgE [Burkholderia ambifaria MC40-6] gi|171994489|gb|ACB65408.1| flagellar basal body FlaE domain protein [Burkholderia ambifaria MC40-6] Length = 413 Score = 85.3 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 31/189 (16%), Positives = 62/189 (32%), Gaps = 2/189 (1%) Query: 8 GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVASGKEY 65 GL+ L + +N++N +TVGF++ +FS++ Q Sbjct: 6 GLSGLAGASNALDVIGNNIANANTVGFKSSTAQFSDMYANSIATSVNTQIGIGTGLASVQ 65 Query: 66 LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125 G+ +T + LD A+ G+ +F + + +RDG F+ +G +V + G+ + Sbjct: 66 QQFGQGTINTTNSSLDVAINGNGFFQMSNNGVTTYSRDGTFQRDKNGFIVDSQGRNLMGY 125 Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185 A I + I+ T + S Sbjct: 126 TAGSGGVINTAQTVPLQAPTTNIAPTATTKITGQFNLNSQDTVPTKTPFSATDSTTYNYS 185 Query: 186 LEDLSGVTV 194 ++ Sbjct: 186 TSIQVYDSL 194 Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 12/125 (9%), Positives = 36/125 (28%), Gaps = 5/125 (4%) Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 D + + + V+ + L + + G V + + Sbjct: 288 NNLAQDGYASGTLTTYSIGADGKLTGNYSNGQTAVLGQIALANFNNPNGLVNLGGNQYAE 347 Query: 180 NIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 + + + + ++ LE+SN + ++ +I + + + I + Sbjct: 348 SSASGVPQISAPGSTNHGVLQGSALENSNVDLTSQLVNLITAQRNYQANAQTIKTQQTVD 407 Query: 235 LEAIR 239 I Sbjct: 408 QTLIN 412 >gi|332525066|ref|ZP_08401246.1| flagellar basal body and hook protein [Rubrivivax benzoatilyticus JA2] gi|332108355|gb|EGJ09579.1| flagellar basal body and hook protein [Rubrivivax benzoatilyticus JA2] Length = 432 Score = 85.3 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 32/135 (23%), Positives = 57/135 (42%), Gaps = 3/135 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID--QKISFVAS 61 SF GL+ A + L + +N++N +T G + + +FS++ N V Sbjct: 2 SFQQGLSGLNATSKSLDVIGNNIANANTYGAKVSRAEFSDMYATALNGAGVNNVGIGVTL 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESP-RGIILTRDGRFKVTDDGSLVSASGK 120 G G+ +TG +D A+ G +F + + TR+G+FKV +G +V+ Sbjct: 62 GAVSQQFTQGNISTTGNAMDMAINGAGFFQVTDGVSPTVYTRNGQFKVDREGYIVNNEKL 121 Query: 121 YPVLDMASVPIQIPQ 135 + A I Sbjct: 122 KLMGYPADGTGTIQP 136 Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 33/98 (33%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLED 201 + + K + L + QG + + + + ++ G LE+ Sbjct: 333 YSNGQSKPAGQLELANFRNPQGLQPLGGNVWASTYASGDAVVGVPSEGNMGVIQAGALEE 392 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ MI + + + I ++ M + Sbjct: 393 SNIDLTGELVNMITAQRIYQANAQTIKTQDQVMQTLVN 430 >gi|332558508|ref|ZP_08412830.1| FlgE [Rhodobacter sphaeroides WS8N] gi|12057218|gb|AAF14370.2|AF133240_4 flagellar hook protein FlgE [Rhodobacter sphaeroides] gi|332276220|gb|EGJ21535.1| FlgE [Rhodobacter sphaeroides WS8N] Length = 423 Score = 85.3 bits (209), Expect = 7e-15, Method: Composition-based stats. Identities = 45/201 (22%), Positives = 79/201 (39%), Gaps = 10/201 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--ISFVAS 61 S N L+ A + ++ + N++N T+GFR + +F++V + I + S V + Sbjct: 2 SINTALSGLSAAQHDIAATSHNIANVGTIGFRGSRAEFADVFNSSPYSISRTAVGSGVQT 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESP-------RGIILTRDGRFKVTDDGSL 114 + + GS ++TG LD A+EG +FA E I TR G F + +G Sbjct: 62 LRTAMQFSQGSVVATGNTLDLAIEGQGFFATEPAVGPNSAKPEPIYTRAGAFGLNAEGVA 121 Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174 ++ASG+ + SV + ++ V + SVD+ Sbjct: 122 INASGQKLLAWPVSVEGDALSQVPGSATPLTIPLTMGSPVGTSTVALSVDLPTDNAMLGR 181 Query: 175 SGISPNIPPT-PLEDLSGVTV 194 P P + + V Sbjct: 182 QAAVPPAAAFDPADPTTYAAV 202 Score = 76.1 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 27/214 (12%), Positives = 64/214 (29%), Gaps = 13/214 (6%) Query: 35 RTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDF--ALEGDAW-FA 91 + V+ + N + + ++ E + D AL G + Sbjct: 211 KGNAVEAAAYFIKTANPTAGNPQTDWAVRLVVAGEPLTPAQGDLTFDATGALSGGTGALS 270 Query: 92 LESPRGIILTRDGR-FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ 150 + G T D ++ D V+ + A +++ ++ G Sbjct: 271 FTAASGNSYTLDLTETQLADRSFEVNTVSQDGKSASALTSLEVDASGTVWAAYGAGSPVA 330 Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNAN 205 G+V+ L + Q + SG + ++ G LE +N + Sbjct: 331 MGQVV----LVTFANPQALRQLGASGFAATADSGQPVAGTAGDSGFGIIRAGALEHANVD 386 Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E+ +I + + + ++ + M + Sbjct: 387 LTEELVHLITAQRNYQASAKAMETSNSLMQTIMN 420 >gi|300114799|ref|YP_003761374.1| fagellar hook-basal body protein [Nitrosococcus watsonii C-113] gi|299540736|gb|ADJ29053.1| fagellar hook-basal body protein [Nitrosococcus watsonii C-113] Length = 425 Score = 85.3 bits (209), Expect = 7e-15, Method: Composition-based stats. Identities = 32/132 (24%), Positives = 56/132 (42%), Gaps = 5/132 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG--AIKNDIDQKISFVAS 61 +FN L+ A L A N++N T GF+ + +F+++ + S V Sbjct: 2 AFNTSLSGLNAASSDLDVTAHNIANASTTGFKRSRSEFADIFAVSSFGRSQTAVGSGVLL 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWF---ALESPRGIILTRDGRFKVTDDGSLVSAS 118 K E G+ T LD A+ G F + + ++ +R G F V +G +V++S Sbjct: 62 NKTAQQFEQGNLDFTQNSLDLAISGQGLFALSPSLNDKDLVYSRAGAFSVDKEGYVVNSS 121 Query: 119 GKYPVLDMASVP 130 G+Y + Sbjct: 122 GQYLRTFPTNEN 133 Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 18/123 (14%), Positives = 35/123 (28%), Gaps = 5/123 (4%) Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 D + V + + + + + L QG + N+ + Sbjct: 301 LNQDGFTSGRLTGLDISKTGVIQANYSNGQNSTLGKVALAQFPNEQGLRQLGNNAWGETV 360 Query: 182 PPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 S T++ G LE SN + E+ +I + F + I+ Sbjct: 361 SSGSALAGEAGVGSFGTIQTGALESSNVDLTAELVHLITAQRNFQANAKAIETASTITDT 420 Query: 237 AIR 239 I Sbjct: 421 IIN 423 >gi|302134834|ref|ZP_07260824.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tomato NCPPB 1108] Length = 441 Score = 85.3 bits (209), Expect = 7e-15, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 52/134 (38%), Gaps = 4/134 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA----IKNDIDQKISFV 59 SFNIGL+ A + L +N++N T GF++ + +F++ + Sbjct: 2 SFNIGLSGLYAANKSLDVTGNNIANVATTGFKSSRAEFADQYAQSIRGTSGQTNVGSGVS 61 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119 + + T LD A+ G+ +F L + + TR G F +G +V++ G Sbjct: 62 TAAVSQQFSQGNLTTGTANSLDLAINGNGFFMLSNNGEKLYTRAGAFHTDKEGFVVNSGG 121 Query: 120 KYPVLDMASVPIQI 133 + Sbjct: 122 MKLQGYNVDANGSV 135 Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 18/123 (14%), Positives = 34/123 (27%), Gaps = 5/123 (4%) Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN- 180 D + + + K +VI L + QG + + Sbjct: 317 QDQDGYATGQLSAMSVDATGNLFATYTNGKSQVIGQTSLTNFANVQGLAQAGGTNWRETF 376 Query: 181 IPPTP----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 P E + + LE+SN + E+ +I + + I M Sbjct: 377 ASGVPVSGVPESGTLGYITGQALEESNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQT 436 Query: 237 AIR 239 I+ Sbjct: 437 TIQ 439 >gi|269103190|ref|ZP_06155887.1| flagellar hook protein FlgE [Photobacterium damselae subsp. damselae CIP 102761] gi|268163088|gb|EEZ41584.1| flagellar hook protein FlgE [Photobacterium damselae subsp. damselae CIP 102761] Length = 449 Score = 85.3 bits (209), Expect = 7e-15, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 66/168 (39%), Gaps = 6/168 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61 S NI L+ A ++ L+T ++N++N +T GF+ + +F +V N V + Sbjct: 2 SVNIALSGLGAAQKDLNTTSNNIANANTYGFKESRAEFGDVYSNSIFSNAKTSTGGGVQT 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALES----PRGIILTRDGRFKVTDDGSLVSA 117 GS + T LD + G +FA+ P LTR+G F + + LV++ Sbjct: 62 STVAQQFHEGSSLYTNNPLDLRISGAGFFAVADNKAEPANNSLTRNGAFHLNNQNELVNS 121 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 GK+ + + E ++ + ++ Sbjct: 122 EGKFLLGYEVNSDTNTVSSYEPKSMKIDDVFGKPTPSKTMDISLNLPN 169 Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 15/98 (15%), Positives = 36/98 (36%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP-----PTPLEDLSGVTVKRGFLED 201 + K +++ + + V QG + + + S +K G LE Sbjct: 350 YSNGKDRIVGRVAMARVSNEQGLSQLGGTLWNVTQESGDAVWGDASQGSFGAIKSGTLEQ 409 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ +I + F + + ++ N + ++ Sbjct: 410 SNIDMTQELVDLITAQRNFQASSRALEVNNQLQQNILQ 447 >gi|222095377|ref|YP_002529437.1| flagellar hook protein flge [Bacillus cereus Q1] gi|221239435|gb|ACM12145.1| flagellar hook protein [Bacillus cereus Q1] gi|324325771|gb|ADY21031.1| flagellar hook protein FlgE [Bacillus thuringiensis serovar finitimus YBT-020] Length = 406 Score = 85.3 bits (209), Expect = 7e-15, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 63/181 (34%), Gaps = 13/181 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----------K 49 M + + A + LS ++N++N TVG++ K F +++ Sbjct: 1 MIKALYTSITGMNATQNALSVTSNNIANAQTVGYKKQKAMFDDLLYNNSIGAKGDGNYAG 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA--LESPRGIILTRDGRFK 107 + + V G+ TG + A+EG+ +F + TR G F Sbjct: 61 TNPKSIGNGVKMSGTVTDYSDGTITLTGGKTQAAMEGNGFFVVGDSKGGNMEFTRKGTFG 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 ++ D + + G+Y A+ I + + G + + G+ ++ Sbjct: 121 ISSDYYITNTEGQYVFAYPANEATGEVDLSGIPGPLQIPMGTAIGGIRTSKGVVGGNIPA 180 Query: 168 G 168 Sbjct: 181 D 181 Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 10/93 (10%), Positives = 29/93 (31%), Gaps = 5/93 (5%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYE 209 + + G ++ N + L + ++ E +N + E Sbjct: 314 AGQLAVAMFPNEGGLMKTGNGNYTATNTTGILALGASGQNGAGKIRGAAQEGANVDLSVE 373 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 ++ + F +I +++ + E + I Sbjct: 374 FVDLMLYQRGFQGNAKVIKVSDEVLNEVVNLIR 406 >gi|304392493|ref|ZP_07374433.1| flagellar hook protein FlgE [Ahrensia sp. R2A130] gi|303295123|gb|EFL89483.1| flagellar hook protein FlgE [Ahrensia sp. R2A130] Length = 423 Score = 85.3 bits (209), Expect = 7e-15, Method: Composition-based stats. Identities = 40/198 (20%), Positives = 70/198 (35%), Gaps = 7/198 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---DIDQKIS 57 M ++ A RLSTVADN++N DT G++ +F+++V + D Sbjct: 6 MMR---TSVSGMQAQSNRLSTVADNVANVDTTGYKKYSTEFAQLVRPGASSGVDSSLGSG 62 Query: 58 FVASGKEYLSKEVGSFISTGTELDFALEGDAWF-ALESPRGIILTRDGRFKVTDDGSLVS 116 V + + G+ T + D A+ G+ +F +S LTR G F G LV+ Sbjct: 63 GVLTDARQHISQQGNVSYTQSSTDIAINGNGFFVVEDSGGSNSLTRAGSFVADASGFLVN 122 Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 A G+ A P + E + ++ + +G Sbjct: 123 AGGQRLKGVAADDQGNFPASIGSISALEPVSVDKQALAAVPTQNGRFVPNLPANSVAVTG 182 Query: 177 ISPNIPPTPLEDLSGVTV 194 +P ++ Sbjct: 183 DTPVDNSAASTFAHKTSL 200 Score = 68.0 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 30/230 (13%), Positives = 61/230 (26%), Gaps = 19/230 (8%) Query: 29 TDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDA 88 T +T + + A DI + + + + + G A G + Sbjct: 191 ASTFAHKTSLTAYDNLGDAKVIDIYSTPTGPLTWEMTAFDASTASPTGGFPYASAALGTS 250 Query: 89 W-------------------FALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASV 129 F + + R + L G ++ D S+V+A Sbjct: 251 TLTFDPANGQLAAGSPDTLTFTVPNGRPVDLALAGTTQLAADYSIVTADLDGAPPASMEG 310 Query: 130 PIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL 189 + + + +A + S + S +I Sbjct: 311 IVVDGEGVLSARYSDGSLRDLYRIPLAAVVSPDRMDSDTGTVFLANTESGDIRVDFAGTG 370 Query: 190 SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S + G LE SN E+ MI + + + + + M + Sbjct: 371 SNGVLISGALEQSNVELADELTDMIRAQRGYTANSKVFQTGADLMDVIVN 420 >gi|225375330|ref|ZP_03752551.1| hypothetical protein ROSEINA2194_00955 [Roseburia inulinivorans DSM 16841] gi|225212819|gb|EEG95173.1| hypothetical protein ROSEINA2194_00955 [Roseburia inulinivorans DSM 16841] Length = 550 Score = 85.3 bits (209), Expect = 7e-15, Method: Composition-based stats. Identities = 27/145 (18%), Positives = 55/145 (37%), Gaps = 18/145 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M S ++ + R+ + +N++N +TV F++ V FS+++ ++ + Sbjct: 1 MMRSMYSAVSGLKTHQTRMDVIGNNIANVNTVAFKSSSVTFSDILYQTTSNASGANATTG 60 Query: 61 S---------------GKEYLSKEVGSFISTGTELDFALEGD---AWFALESPRGIILTR 102 + + G+ +TG D L +F + + + TR Sbjct: 61 TGGVNAKQIGLGTTAAATKVSITSAGASETTGNPFDIRLTDKNSTNFFIVNNGSENVFTR 120 Query: 103 DGRFKVTDDGSLVSASGKYPVLDMA 127 G F V G+L +S Y V+ Sbjct: 121 SGSFYVDGSGNLCMSSTGYTVMGWQ 145 Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 22/156 (14%), Positives = 51/156 (32%), Gaps = 10/156 (6%) Query: 90 FALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEIS 149 ++ + + G+ + D V + A I I I+ + G Sbjct: 396 ITVDFSQCLNYENGGKSTIGADAGAVDGTTGKGRKLGAMTGIFIDTSGRIYGTYDNGN-- 453 Query: 150 QKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE------DLSGVTVKRGFLEDSN 203 +++ + + + G + S + + G ++ G LE SN Sbjct: 454 --TELLGQIAVAQFSNASGLEKVGESCYRTTLNSGEFDGIGVEISADGSSMTTGELEMSN 511 Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + E MI + F + + +I ++ + E + Sbjct: 512 VDLSSEFTSMITTQRGFQANSRVITTSDTLLEELVN 547 >gi|110632640|ref|YP_672848.1| flagellar hook protein FlgE [Mesorhizobium sp. BNC1] gi|110283624|gb|ABG61683.1| flagellar basal body FlaE [Chelativorans sp. BNC1] Length = 422 Score = 85.3 bits (209), Expect = 7e-15, Method: Composition-based stats. Identities = 35/125 (28%), Positives = 53/125 (42%), Gaps = 2/125 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 G++ A RLSTVADN++N+ T G++ +FS +V V S Sbjct: 6 MMKTGVSGMNAQANRLSTVADNIANSSTNGYKRATTEFSTLVVP-GTQGSYNSGGVTSTV 64 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASGKYP 122 G T + D A+ G +F ++ G TR G F + DG LV++SG Sbjct: 65 RNAVSAQGVLQYTTSITDLAVNGSGFFIVQGSNGQPYLTRAGSFVLDGDGRLVNSSGYQL 124 Query: 123 VLDMA 127 + Sbjct: 125 MGYSY 129 Score = 74.1 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 13/125 (10%), Positives = 32/125 (25%), Gaps = 5/125 (4%) Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 +D + + K + + L +V + + Sbjct: 295 YDAEVDGTPPTSIDSIEISAEGIVYAQYADGSFKPLYRIPLANVTSPDQLEVLSGNAFAE 354 Query: 180 NIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 + + + G LE SN + E+ MI + + + + + M Sbjct: 355 TAASGAVRIGFAGSDGLGDIASGALESSNVDIAEELTSMIESQRSYTANSKVFQTGSDLM 414 Query: 235 LEAIR 239 + Sbjct: 415 ELLVN 419 >gi|330818585|ref|YP_004362290.1| flagellar hook protein FlgE [Burkholderia gladioli BSR3] gi|327370978|gb|AEA62334.1| flagellar hook protein FlgE [Burkholderia gladioli BSR3] Length = 414 Score = 85.3 bits (209), Expect = 7e-15, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 61/146 (41%), Gaps = 2/146 (1%) Query: 8 GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG--KEY 65 GL+ L + +N++N +T GF+ +F+++ + + + Sbjct: 6 GLSGLQGASNDLDVIGNNIANANTTGFKAATAQFTDMYANSVSSAVANGIGIGTQLAAVA 65 Query: 66 LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125 + G F +T L+ A+ G+ +F + + TRDG F +G++V+A+G + Sbjct: 66 QVFQQGGFTTTQNPLNMAINGNGFFQVTNNGVTTYTRDGTFNADKNGNIVNAAGAQLMGY 125 Query: 126 MASVPIQIPQKDEIFNVGEKGEISQK 151 + I + +G ++ K Sbjct: 126 AVNANGVINTGALVPLTAPQGNLAPK 151 Score = 58.7 bits (140), Expect = 7e-07, Method: Composition-based stats. Identities = 10/98 (10%), Positives = 27/98 (27%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFL-----ED 201 + + + + + + + QG + + + G L E Sbjct: 316 YSNNQTLTLGQVVVVNFNNPQGLTSIGGNQYIQTSASGVPQVGVPGSTNHGTLKGSTTEA 375 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S + E+ +I + + + I + I Sbjct: 376 STTDLTGELVNLITAQRDYQANAQTIKTQQAVDQTLIN 413 >gi|330953726|gb|EGH53986.1| flagellar basal body rod protein FlgG [Pseudomonas syringae Cit 7] Length = 113 Score = 85.3 bits (209), Expect = 8e-15, Method: Composition-based stats. Identities = 24/111 (21%), Positives = 46/111 (41%), Gaps = 13/111 (11%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + A + L+T+++N++N T GF++ + +F +++ IK Sbjct: 1 MLPALYVAKTGLAAQDTNLTTISNNLANVSTTGFKSDRAEFQDLLYQIKRQPGAQSTQDS 60 Query: 54 ------QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98 Q + V + GS +T LD A+ G +F + P G Sbjct: 61 ELPSGLQLGTGVRIVGTQKNFNAGSLQTTNNPLDLAVNGRGFFQVTQPDGT 111 >gi|330445348|ref|ZP_08309000.1| conserved hypothetical protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489539|dbj|GAA03497.1| conserved hypothetical protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 467 Score = 85.3 bits (209), Expect = 8e-15, Method: Composition-based stats. Identities = 38/168 (22%), Positives = 69/168 (41%), Gaps = 6/168 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61 S NI L+ A ++ L+T ++N++N +T GF+ + +F +V + N V + Sbjct: 2 SMNIALSGLGAAQKDLNTTSNNIANANTFGFKESRAEFGDVYSSSIFSNAKTTTGGGVQT 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFAL----ESPRGIILTRDGRFKVTDDGSLVSA 117 GS I T LD + G +FA+ P LTR+G F + ++ LV++ Sbjct: 62 STVAQQFHEGSSIYTNNPLDLRVSGSGFFAVADNKNEPANNNLTRNGAFHLNNENELVNS 121 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 GK+ + + E ++ Q K ++ Sbjct: 122 EGKFLLGYPVNKESNTVASYEAKSMKIDDIFGQPTKSNNIKVSLNLPN 169 Score = 68.0 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 27/146 (18%), Positives = 46/146 (31%), Gaps = 7/146 (4%) Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK--VIATM 158 T+ D SA D+ K +I G GK V+ + Sbjct: 320 TQTLNMNYDDPTQYASAFEVRKFEDVDGATTGYLSKVDIDPEGNILASYSNGKDVVVGRV 379 Query: 159 GLYSVDMSQGFVRRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQM 213 L V QG + + + S +K G LE SN + E+ + Sbjct: 380 ALARVSNEQGLAQLGGTLWNTTQESGQAIWGDASQGSFGAIKSGTLEQSNIDMTQELVDL 439 Query: 214 IHLTQKFNSITTLIDENEKSMLEAIR 239 I + F + + +D N + ++ Sbjct: 440 ITAQRNFQASSRALDVNNQLQQNILQ 465 >gi|241113584|ref|YP_002973419.1| protein of unknown function DUF1078 domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240861792|gb|ACS59458.1| protein of unknown function DUF1078 domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 430 Score = 85.3 bits (209), Expect = 8e-15, Method: Composition-based stats. Identities = 39/163 (23%), Positives = 67/163 (41%), Gaps = 2/163 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 S ++ A RLSTV+DN++N +T G++ + FS +V + + V + Sbjct: 6 SMKTAVSGMSAQANRLSTVSDNIANANTTGYKAVSTSFSSLVLPSSSG-NYNSGGVQTSV 64 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGKYP 122 + G T + D A+ GD +F +ES G +LTR G F V DG+LV+ +G Sbjct: 65 RQAISQQGDISYTTSAYDLAISGDGFFIVESADGTPVLTRAGDFSVDSDGNLVNGAGFTL 124 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 + + + + +A+ Y Sbjct: 125 MGYSYDSGVPAVVVNGFDGLVPVNVSQSGLSAVASSSAYFSGN 167 Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 13/73 (17%), Positives = 27/73 (36%), Gaps = 1/73 (1%) Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 G V N + P + +++ G LE SN + E+ +MI + + + + + Sbjct: 356 SGNVYSANGLSGVTVTGFPQTNG-LGSIQSGALESSNVDLAGELTEMIEAQRSYTANSKV 414 Query: 227 IDENEKSMLEAIR 239 M + Sbjct: 415 FQTGSDIMDVLVN 427 >gi|221639495|ref|YP_002525757.1| Flagellar hook protein FlgE [Rhodobacter sphaeroides KD131] gi|221160276|gb|ACM01256.1| Flagellar hook protein FlgE [Rhodobacter sphaeroides KD131] Length = 423 Score = 85.3 bits (209), Expect = 8e-15, Method: Composition-based stats. Identities = 45/201 (22%), Positives = 79/201 (39%), Gaps = 10/201 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--ISFVAS 61 S N L+ A + ++ + N++N T+GFR + +F++V + I + S V + Sbjct: 2 SINTALSGLSAAQHDIAATSHNIANVGTIGFRGSRAEFADVFNSSPYSISRTAVGSGVQT 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESP-------RGIILTRDGRFKVTDDGSL 114 + + GS ++TG LD A+EG +FA E I TR G F + +G Sbjct: 62 LRTAMQFSQGSVVATGNTLDLAIEGQGFFATEPAVGPNSAKPEPIYTRAGAFGLNAEGVA 121 Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174 ++ASG+ + SV + ++ V + SVD+ Sbjct: 122 INASGQKLLAWPVSVEGDALSQVPGSATPLTIPLTMGSPVGTSTVALSVDLPTDDAMLGR 181 Query: 175 SGISPNIPPT-PLEDLSGVTV 194 P P + + V Sbjct: 182 QAAVPPAAAFDPADPTTYAAV 202 Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 27/214 (12%), Positives = 64/214 (29%), Gaps = 13/214 (6%) Query: 35 RTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDF--ALEGDAW-FA 91 + V+ + N + + ++ E + D AL G + Sbjct: 211 KGNAVEAAAYFIKTANPTAGNPQTDWAVRLVVAGEPLTPAQGDLTFDATGALSGGTGALS 270 Query: 92 LESPRGIILTRDGR-FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ 150 + G T D ++ D V+ + A +++ ++ G Sbjct: 271 FTAASGNSYTLDLTETQLADRSFEVNTVSQDGKSASALTSLEVDASGTVWAAYGAGSPVA 330 Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNAN 205 G+V+ L + Q + SG + ++ G LE +N + Sbjct: 331 MGQVV----LVTFANPQALRQLGASGFAATADSGQPVAGTAGDSGFGIIRAGALEHANVD 386 Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E+ +I + + + ++ + M + Sbjct: 387 LTEELVHLITAQRNYQASAKAMETSNSLMQTIMN 420 >gi|28869140|ref|NP_791759.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tomato str. DC3000] gi|213967582|ref|ZP_03395730.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tomato T1] gi|301385713|ref|ZP_07234131.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tomato Max13] gi|302060075|ref|ZP_07251616.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tomato K40] gi|28852380|gb|AAO55454.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tomato str. DC3000] gi|213927883|gb|EEB61430.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tomato T1] gi|331017026|gb|EGH97082.1| flagellar hook protein FlgE [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 441 Score = 85.3 bits (209), Expect = 8e-15, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 52/134 (38%), Gaps = 4/134 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA----IKNDIDQKISFV 59 SFNIGL+ A + L +N++N T GF++ + +F++ + Sbjct: 2 SFNIGLSGLYAANKSLDVTGNNIANVATTGFKSSRAEFADQYAQSIRGTSGQTNVGSGVS 61 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119 + + T LD A+ G+ +F L + + TR G F +G +V++ G Sbjct: 62 TAAVSQQFSQGNLTTGTANSLDLAINGNGFFMLSNNGEKLYTRAGAFHTDKEGFVVNSGG 121 Query: 120 KYPVLDMASVPIQI 133 + Sbjct: 122 MKLQGYNVDANGSV 135 Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 18/123 (14%), Positives = 34/123 (27%), Gaps = 5/123 (4%) Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN- 180 D + + + K +VI L + QG + + Sbjct: 317 QDQDGYATGQLSAMSVDATGNLFATYTNGKSQVIGQTSLTNFANVQGLAQAGGTNWRETF 376 Query: 181 IPPTP----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 P E + + LE+SN + E+ +I + + I M Sbjct: 377 ASGVPVSGVPESGTLGYITGQALEESNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQT 436 Query: 237 AIR 239 I+ Sbjct: 437 TIQ 439 >gi|206562843|ref|YP_002233606.1| flagellar hook protein FlgE [Burkholderia cenocepacia J2315] gi|198038883|emb|CAR54845.1| flagellar hook protein 2 FlgE2 [Burkholderia cenocepacia J2315] Length = 414 Score = 84.9 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 64/189 (33%), Gaps = 2/189 (1%) Query: 8 GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVASGKEY 65 GL+ L + +N++N +TVGF+ + F+++ Q Sbjct: 6 GLSGLAGASSNLDVIGNNIANANTVGFKQGRANFADMYANSVATSVNTQIGIGTRLASVQ 65 Query: 66 LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125 + G+ ST + LD A+ G+ +F + S +RDG F +G++V A G+ + Sbjct: 66 QNFGQGTINSTKSSLDVAINGNGFFQMSSNGVTTYSRDGTFHRDKNGAIVDAQGRNLMGY 125 Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185 A I + I+ + T + + + Sbjct: 126 AAGAGGVINTAQTVPLQAPTNNIAPRATSKITGQFNLNAQDKVPAKTPFNATDNTTYNYN 185 Query: 186 LEDLSGVTV 194 T+ Sbjct: 186 SSIQVYDTL 194 Score = 68.4 bits (165), Expect = 9e-10, Method: Composition-based stats. Identities = 13/98 (13%), Positives = 33/98 (33%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLED 201 + + V+ + L + + G V + + + + T++ LE+ Sbjct: 315 YSNGQSAVLGLIALANFNNPNGLVNIGGNQYAETAASGVPQIAAPGSTNHGTLQGSALEN 374 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN N E+ +I + + + I + + Sbjct: 375 SNVNLTTELVNLITAQRNYQANAQTIKTQQAVDQTLLN 412 >gi|27363705|ref|NP_759233.1| flagellar hook protein FlgE [Vibrio vulnificus CMCP6] gi|37679147|ref|NP_933756.1| flagellar hook protein FlgE [Vibrio vulnificus YJ016] gi|320157109|ref|YP_004189488.1| flagellar hook protein FlgE [Vibrio vulnificus MO6-24/O] gi|27359821|gb|AAO08760.1| Flagellar hook protein flgE [Vibrio vulnificus CMCP6] gi|37197889|dbj|BAC93727.1| flagellar hook protein FlgE [Vibrio vulnificus YJ016] gi|319932421|gb|ADV87285.1| flagellar hook protein FlgE [Vibrio vulnificus MO6-24/O] Length = 434 Score = 84.9 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 72/207 (34%), Gaps = 13/207 (6%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGK 63 + L+ A + L+T ++N++N +T GF+ + +F +V N V + + Sbjct: 3 YVSLSGLSAAQLDLNTTSNNIANANTYGFKESRAEFGDVYSNSLFTNAKTTPGGGVQANQ 62 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWF----ALESPRGIILTRDGRFKVTDDGSLVSASG 119 GS I T +D + G +F P LTR+G F ++ D +V+A+ Sbjct: 63 VAQQFHEGSSIYTNNPMDLRISGTGFFAVAKDRMVPNQNELTRNGAFHLSKDNYMVTAND 122 Query: 120 KYPVLDMASV------PIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF-VRR 172 +Y + + + G+ + S + ++ Q F Sbjct: 123 EYLLGYQVDPLSGDVASYEPQPLNIPAEFGKPKQTSNVTVGVNLPASGALKDPQAFDFED 182 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFL 199 ++ + +L Sbjct: 183 PDTYNRSTSSTIYDSMGQSYKLTTYYL 209 Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats. Identities = 21/145 (14%), Positives = 47/145 (32%), Gaps = 6/145 (4%) Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ-KGKVIATMG 159 T+ F + + + + + + D N G S + + + Sbjct: 288 TQTIAFDLNSSTQFAAPFELTKFDEDGATTGFLTKVDIDENGSVYGTYSNGENVTLGRVA 347 Query: 160 LYSVDMSQGFVRRENSGISPNIP-----PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMI 214 L V QG ++ + + S TV G LE SN + E+ +I Sbjct: 348 LVRVPNEQGLDKKGGTQWNSTNNSGDKIWGESNKGSFGTVSSGALEQSNIDMTQELVDLI 407 Query: 215 HLTQKFNSITTLIDENEKSMLEAIR 239 + F + + ++ + + ++ Sbjct: 408 SAQRNFQANSRALEVHNQLQQNILQ 432 >gi|254248705|ref|ZP_04942025.1| Flagellar hook protein FlgE [Burkholderia cenocepacia PC184] gi|124875206|gb|EAY65196.1| Flagellar hook protein FlgE [Burkholderia cenocepacia PC184] Length = 414 Score = 84.9 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 64/189 (33%), Gaps = 2/189 (1%) Query: 8 GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVASGKEY 65 GL+ L + +N++N +TVGF+ + F+++ Q Sbjct: 6 GLSGLAGASSNLDVIGNNIANANTVGFKQGRANFADMYANSVATSVNTQIGIGTRLASVQ 65 Query: 66 LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125 + G+ ST + LD A+ G+ +F + S +RDG F +G++V A G+ + Sbjct: 66 QNFGQGTINSTKSSLDVAINGNGFFQMSSNGVTTYSRDGTFHRDKNGAIVDAQGRNLMGY 125 Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185 A I + I+ + T + + + Sbjct: 126 AAGAGGVINTAQTVPLQAPTSNIAPRATSRITGQFNLNAQDKVPAKTPFNATDNTTYNYN 185 Query: 186 LEDLSGVTV 194 T+ Sbjct: 186 SSIQVYDTL 194 Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 13/98 (13%), Positives = 33/98 (33%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLED 201 + + V+ + L + + G V + + + + T++ LE+ Sbjct: 315 YSNGQSAVLGLIALANFNNPNGLVNIGGNQYAETAASGVPQVSAPGSTNHGTLQGSALEN 374 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN N E+ +I + + + I + + Sbjct: 375 SNVNLTTELVNLITAQRNYQANAQTIKTQQAVDQALLN 412 >gi|224825164|ref|ZP_03698270.1| flagellar basal body FlaE domain protein [Lutiella nitroferrum 2002] gi|224602835|gb|EEG09012.1| flagellar basal body FlaE domain protein [Lutiella nitroferrum 2002] Length = 419 Score = 84.9 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 36/132 (27%), Positives = 62/132 (46%), Gaps = 6/132 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID--QKISFVAS 61 F GL+ A ++L V +N++N T GF+ + +F+++ G+ + Q V + Sbjct: 2 GFQQGLSGLAAASKQLEVVGNNVANASTNGFKRSRSEFADMYGSSLYGVSNAQAGIGVRT 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESP----RGIILTRDGRFKVTDDGSLVSA 117 + + G+ STG LD A+ G +F L+SP +R+G F+V +G LV+ Sbjct: 62 AEVSQLFDQGNINSTGNNLDLAISGKGFFVLKSPSAASSQDAYSRNGAFQVDANGYLVNG 121 Query: 118 SGKYPVLDMASV 129 G A Sbjct: 122 DGYKLQGYAAQN 133 Score = 70.7 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 17/126 (13%), Positives = 32/126 (25%), Gaps = 6/126 (4%) Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 D + + E + K I + L + QG + Sbjct: 292 NSLSADGNAPGTLTSTNINNQGIIEATYSNGKTVAIGQVALANFTNVQGLQSMGGNLWKD 351 Query: 180 NIPPT------PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 T ++ LE SN + E+ MI + + + I + Sbjct: 352 VASSTGGAKVGAPMSADLGEIQSQALEQSNVDLNSELVDMIVAQRFYQANAQSIKTEDTI 411 Query: 234 MLEAIR 239 + I Sbjct: 412 LQTLIN 417 >gi|226944492|ref|YP_002799565.1| flagellar basal body rod protein [Azotobacter vinelandii DJ] gi|226719419|gb|ACO78590.1| Flagellar basal body rod protein [Azotobacter vinelandii DJ] Length = 383 Score = 84.9 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 30/129 (23%), Positives = 65/129 (50%), Gaps = 5/129 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 F+ L+ A L+ V++N++N+ TVGF++ +F++V + + + +++ V Sbjct: 2 GFSQALSGLNAASSNLNVVSNNIANSQTVGFKSSTTQFADVYASSRVGLGVQVAGV---- 57 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPV 123 + G+ +T LD A+ G +F E ++ +R+G+ +T +G L +A G + Sbjct: 58 -VQNFTSGNLETTDRSLDLAISGSGFFRFEQAGQVVYSRNGQLTLTPEGYLQNAQGARLL 116 Query: 124 LDMASVPIQ 132 ++ I Sbjct: 117 GSNGAIQIP 125 Score = 75.3 bits (183), Expect = 7e-12, Method: Composition-based stats. Identities = 22/221 (9%), Positives = 62/221 (28%), Gaps = 11/221 (4%) Query: 30 DTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAW 89 +T + F + + + + + + + S L+F G Sbjct: 160 NTYSYANTATVFDSLGNSHELTLYFTKTGTNEWAVNAALDGAVSASAAQALEFTTSGLLD 219 Query: 90 FALESPRGIILTR-DGRFKVTDDGSLVSASGKY-----PVLDMASVPIQIPQKDEIFNVG 143 + +T D + + G D + + E Sbjct: 220 GYTPTSFDFAMTNGAADISFELDLTGSTQFGNDFEVSSLDQDGYTAGSLVGFTIEENGNV 279 Query: 144 EKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGF 198 +++ V+ + L + +G ++ + +++ G Sbjct: 280 VGNYSNEQSLVVGQIQLATFRSPEGLQPVGDNAWVETAASGQPLVGTAGNGQFGSLESGV 339 Query: 199 LEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +E SN + E+ +I + F + + + + +A+ Sbjct: 340 VEASNVDLTKELVNLIIAQRNFQANAQSVSTQSEVLEQAVN 380 >gi|298487854|ref|ZP_07005894.1| Flagellar basal-body rod protein flgF [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298157579|gb|EFH98659.1| Flagellar basal-body rod protein flgF [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 258 Score = 84.9 bits (208), Expect = 9e-15, Method: Composition-based stats. Identities = 34/185 (18%), Positives = 67/185 (36%), Gaps = 3/185 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + ++ A+N++N T GF + + + ++ ++ Sbjct: 1 MDKLLYVAMSGASENAIAQKAHANNLANVSTNGFMRDLEQARSM--PVFGEVMPSRAYAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 S + G+ + TG ELD A++GD W A+++P G TR + G L SG Sbjct: 59 SERPGTDFSAGAMVETGRELDIAVKGDGWIAVQTPDGGEAYTRSSGMNIDALGVLRDGSG 118 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 + + + + Q+ EI G S + + + + ++ G Sbjct: 119 LPVMGNGGPIAVPPQQQIEIGADGTISIRSLGESPQVMAQVDRIKLVKPDLKTMEKGPGW 178 Query: 180 NIPPT 184 P Sbjct: 179 PDPHQ 183 >gi|329898288|ref|ZP_08272371.1| Flagellar basal-body rod protein flgF [gamma proteobacterium IMCC3088] gi|328920853|gb|EGG28296.1| Flagellar basal-body rod protein flgF [gamma proteobacterium IMCC3088] Length = 253 Score = 84.9 bits (208), Expect = 9e-15, Method: Composition-based stats. Identities = 47/238 (19%), Positives = 81/238 (34%), Gaps = 10/238 (4%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65 +A+ + Q + + ++N TVGF+ +E V + VA+ +++ Sbjct: 5 YTAMASVKQVNQARAQTTNMLANVSTVGFKESYRHATESVKVASTAFETTYQPVAASEDF 64 Query: 66 LSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASGKYPVL 124 +S G STG +LD ++ ++ S I TR G +V + G L +G+ V Sbjct: 65 ISLRAGPMQSTGRKLDIFMQAQTVLGVQASNEQIAFTRRGDLRVNEIGQLELGTGQLVVD 124 Query: 125 DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENSGISPN 180 D S +D A D S + R G+ Sbjct: 125 DAGSPISVPLGQDLEIGADGTVVAYDPELPEAPGAEVGRLMLRDASATVLARRLDGLFEP 184 Query: 181 I-----PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 + + G LE S+ N + Q++ + F S LI E Sbjct: 185 ATQAGSGGDFESGPTPPEILSGALEGSSVNVSEMLTQLLDYNRSFESRIRLIKEVRDL 242 >gi|253996319|ref|YP_003048383.1| flagellar hook protein FlgE [Methylotenera mobilis JLW8] gi|253982998|gb|ACT47856.1| flagellar basal body FlaE domain protein [Methylotenera mobilis JLW8] Length = 421 Score = 84.9 bits (208), Expect = 9e-15, Method: Composition-based stats. Identities = 32/132 (24%), Positives = 60/132 (45%), Gaps = 2/132 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG- 62 SF GL+ A ++L + +N+SN +TVGF+ + +F++V + + Sbjct: 2 SFQQGLSGLNAASKQLEVIGNNVSNANTVGFKQSRAEFADVFANSITGGGGSQIGIGTNL 61 Query: 63 -KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 G+ +T LD A+ G+ +F + S + TR+G+F++ G +V ++ K Sbjct: 62 ATVAQQFTQGNITATNNSLDIAINGNGFFRMSSGGAVTYTRNGQFQLDKQGFIVDSASKR 121 Query: 122 PVLDMASVPIQI 133 A I Sbjct: 122 LTGYAADANGNI 133 Score = 78.4 bits (191), Expect = 9e-13, Method: Composition-based stats. Identities = 28/216 (12%), Positives = 64/216 (29%), Gaps = 11/216 (5%) Query: 34 FRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE 93 FR ++ + S A+ + + S T T + + + Sbjct: 205 FRKTAANVWDI-YTTVDGAPIPASGAATAQMTFTGTGVSPTITPTAPATGIPSVTFTPMN 263 Query: 94 SPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-----EI 148 + + T D S + G ++ S + FN G Sbjct: 264 TATTPVANGAANVTTTIDYSKSTQFGSAFSINALSQDGFTSGRLSGFNTASDGTIVGRYS 323 Query: 149 SQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSN 203 + + K + + L S G + + + P + + ++ +EDSN Sbjct: 324 NGQSKNLGRVVLSSFTNPNGLQSLGGNAWAVSASSGPALTGAPGSGLLGVLQSSAVEDSN 383 Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + E+ MI + + + I ++ + + Sbjct: 384 VDLTAELVNMITAQRVYQANAQTIKTQDQVLQTLVN 419 >gi|260901953|ref|ZP_05910348.1| flagellar hook protein FlgE [Vibrio parahaemolyticus AQ4037] gi|308106765|gb|EFO44305.1| flagellar hook protein FlgE [Vibrio parahaemolyticus AQ4037] Length = 437 Score = 84.9 bits (208), Expect = 9e-15, Method: Composition-based stats. Identities = 29/200 (14%), Positives = 72/200 (36%), Gaps = 7/200 (3%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGK 63 + L+ A + L+T ++N++N +T GF+ + +F++V N + + Sbjct: 3 YVSLSGLSAAQLDLNTTSNNIANANTYGFKESRAEFADVYSNSLFTNAKTTPGGGAQASQ 62 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWF----ALESPRGIILTRDGRFKVTDDGSLVSASG 119 GS I T +D + G +F P+ +TR+G F + + +V+A+ Sbjct: 63 VAQQFHEGSSIYTNNPMDLRVSGTGFFAVAKDRLIPQQNEMTRNGAFHLNKENYMVTAND 122 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV-RRENSGIS 178 ++ + + E + E + + ++ + + Sbjct: 123 EFLLGYQVNPESGEVSSYEPQPINIPAEFGKPKQTANIEVGMNLPANGDLKDPTQFDFSD 182 Query: 179 PNIPPTPLEDLSGVTVKRGF 198 P+ ++ + + Sbjct: 183 PDTYNRSTSSTIYDSMGQSY 202 Score = 65.7 bits (158), Expect = 6e-09, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 34/98 (34%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI-----PPTPLEDLSGVTVKRGFLED 201 + + + + L V QG ++ + S T+ G LE Sbjct: 338 YSNGENVTLGRVALVRVPNEQGLDKKGGTQWDSTQFSGDKIWGESNKGSFGTINNGMLEQ 397 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ +I + F + + ++ + + ++ Sbjct: 398 SNIDMTQELVDLISAQRNFQANSRSLEVHNQLQQNILQ 435 >gi|116248740|ref|YP_764581.1| flagellar hook protein FlgE [Rhizobium leguminosarum bv. viciae 3841] gi|115253390|emb|CAK11778.1| putative flagellar hook protein flgE [Rhizobium leguminosarum bv. viciae 3841] Length = 430 Score = 84.9 bits (208), Expect = 9e-15, Method: Composition-based stats. Identities = 40/163 (24%), Positives = 67/163 (41%), Gaps = 2/163 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 S ++ A RLSTV+DN++N +T G++ + FS +V + + V + Sbjct: 6 SMKTAVSGMSAQANRLSTVSDNIANANTTGYKAVSTSFSSLVLPSSSG-NYNSGGVQTSV 64 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGKYP 122 + G T + D A+ GD +F +ES G +LTR G F V DG+LV+ +G Sbjct: 65 RQAISQQGDISYTTSAYDLAISGDGFFIVESADGTPVLTRAGDFSVDSDGNLVNGAGFTL 124 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 + + + + IA+ Y Sbjct: 125 MGYSYDSGVPAVVVNGFDGLVPVNVSQSGLSAIASSSAYFSGN 167 Score = 73.0 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 13/73 (17%), Positives = 27/73 (36%), Gaps = 1/73 (1%) Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 G V N + P + +++ G LE SN + E+ +MI + + + + + Sbjct: 356 SGNVYSANGLSGVTVTGFPQTNG-LGSIQSGALESSNVDLAGELTEMIEAQRSYTANSKV 414 Query: 227 IDENEKSMLEAIR 239 M + Sbjct: 415 FQTGSDIMDVLVN 427 >gi|312882659|ref|ZP_07742396.1| flagellar hook protein FlgE [Vibrio caribbenthicus ATCC BAA-2122] gi|309369620|gb|EFP97135.1| flagellar hook protein FlgE [Vibrio caribbenthicus ATCC BAA-2122] Length = 435 Score = 84.9 bits (208), Expect = 9e-15, Method: Composition-based stats. Identities = 32/172 (18%), Positives = 68/172 (39%), Gaps = 6/172 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61 S I L+ A + L+T ++N++N +T GF+ + +F++V + V + Sbjct: 2 SSYISLSGLSAAQLDLNTTSNNIANANTYGFKESRAEFADVYSNSIFTHAKTTPGQGVQA 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWF----ALESPRGIILTRDGRFKVTDDGSLVSA 117 K GS I T +D + G +F +P LTR+G F + D +V++ Sbjct: 62 SKVAQQFHEGSSIYTNNPMDLRINGTGFFAVAKDRLTPTTNELTRNGAFHLNKDNYMVTS 121 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169 + ++ + + E ++ E + + ++ + Sbjct: 122 NDEFLLGYQVNKDTGDVLSYEPSSIMIPKEFGKPKQTANIEVGVNLPANAPL 173 Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 18/145 (12%), Positives = 48/145 (33%), Gaps = 6/145 (4%) Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ-KGKVIATMG 159 T+ F + + + + + + D N G S + ++ + Sbjct: 289 TQTLSFGLDSATQFAAPFELTKFDEDGATTGFLTKVDFDENGSVLGTYSNGENVILGRVA 348 Query: 160 LYSVDMSQGFVRRENSGISPNI-----PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMI 214 + V QG ++ + S T++ G LE +N + E+ +I Sbjct: 349 MVRVANEQGLDKKGGTQWDATQFSGDKIWGESNKGSFGTIRSGTLEQANIDMTQELVDLI 408 Query: 215 HLTQKFNSITTLIDENEKSMLEAIR 239 + F + + ++ + + ++ Sbjct: 409 QAQRNFQANSRALEVHNTTQQNILQ 433 >gi|89075495|ref|ZP_01161906.1| flagellar hook protein [Photobacterium sp. SKA34] gi|89048767|gb|EAR54338.1| flagellar hook protein [Photobacterium sp. SKA34] Length = 467 Score = 84.9 bits (208), Expect = 9e-15, Method: Composition-based stats. Identities = 35/131 (26%), Positives = 61/131 (46%), Gaps = 6/131 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61 S NI L+ A ++ L+T ++N++N +T GF+ + +F +V N V + Sbjct: 2 SMNIALSGLGAAQKDLNTTSNNIANANTFGFKESRAEFGDVYSNSIFSNAKTTTGGGVQT 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFAL----ESPRGIILTRDGRFKVTDDGSLVSA 117 GS I T LD + G +FA+ P LTR+G F + ++ LV++ Sbjct: 62 STVAQQFHEGSSIYTNNPLDLRVSGSGFFAVADNKNEPANNNLTRNGAFHLNNENELVNS 121 Query: 118 SGKYPVLDMAS 128 GK+ + + Sbjct: 122 EGKFLLGYPVN 132 Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 47/146 (32%), Gaps = 7/146 (4%) Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK--VIATM 158 T+ D SA D+ K +I G GK V+ + Sbjct: 320 TQSLTMNYDDPTQYASAFEVRKFQDVDGATTGYLSKVDIDPEGNILASYSNGKDIVVGRV 379 Query: 159 GLYSVDMSQGFVRRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQM 213 L V QG + + + S +VK G LE SN + E+ + Sbjct: 380 ALARVSNEQGLAQLGGTLWNTTQESGQAIWGDASQGSFGSVKSGTLEQSNIDMTQELVDL 439 Query: 214 IHLTQKFNSITTLIDENEKSMLEAIR 239 I + F + + +D N + ++ Sbjct: 440 ITAQRNFQASSRALDVNNQLQQNILQ 465 >gi|254456854|ref|ZP_05070282.1| conserved domain protein [Campylobacterales bacterium GD 1] gi|207085646|gb|EDZ62930.1| conserved domain protein [Campylobacterales bacterium GD 1] Length = 419 Score = 84.9 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 28/132 (21%), Positives = 56/132 (42%), Gaps = 7/132 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-------D 53 M +F G++ + + ++ + DN++N TVGFR +F+ + N Sbjct: 2 MTQAFYTGISGLKSNQGGINIITDNLANISTVGFRGYNTEFASMFEDNLNTTSKNSATSS 61 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113 + V ++++ G + D A+ G+ WF ++ + + TR G F D Sbjct: 62 TIGAGVKLQAATMNRDQGVIQISDKSTDLAIVGNGWFGIQGEKDTMYTRGGNFTFDRDSD 121 Query: 114 LVSASGKYPVLD 125 L++ G Y + Sbjct: 122 LITQDGFYVLGT 133 Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 12/93 (12%), Positives = 30/93 (32%), Gaps = 8/93 (8%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT--------VKRGFLEDSNANS 206 + + +Y QG R + + + LE SN Sbjct: 324 VGKIAVYHFRNEQGLDRASGARFFEGKNSGSPLFYQDSSGENIIGTDILNFHLEGSNVQM 383 Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + +I + +++ + I ++ M +A++ Sbjct: 384 TTGLTDLIIFQRAYDANSKSITTADQMMQKALQ 416 >gi|289627763|ref|ZP_06460717.1| flagellar hook protein FlgE [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289651647|ref|ZP_06482990.1| flagellar hook protein FlgE [Pseudomonas syringae pv. aesculi str. 2250] gi|330866422|gb|EGH01131.1| flagellar hook protein FlgE [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 441 Score = 84.9 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 52/134 (38%), Gaps = 4/134 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA----IKNDIDQKISFV 59 SFNIGL+ A + L +N++N T GF++ + +F++ + Sbjct: 2 SFNIGLSGLYAANKSLDVTGNNIANVATTGFKSSRAEFADQYAQSIRGTSGQTNVGSGVT 61 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119 + + T LD A+ G+ +F L + + TR G F +G +V++ G Sbjct: 62 TAAVSQQFTQGNLTTGTANSLDLAINGNGFFMLSNNGEKLYTRAGAFHTDKEGYVVNSGG 121 Query: 120 KYPVLDMASVPIQI 133 + Sbjct: 122 MKLQGYNVDANGSV 135 Score = 63.0 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 16/123 (13%), Positives = 33/123 (26%), Gaps = 5/123 (4%) Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 D + + + K +VI L + QG + + Sbjct: 317 QDQDGYATGQLSAMSVDATGNLFATYTNGKSQVIGQTSLTNFANVQGLAQAGGTNWRETF 376 Query: 182 PPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + + + LE+SN + E+ +I + + I M Sbjct: 377 ASGVPVSGTPQSGTLGYITGQALEESNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQT 436 Query: 237 AIR 239 I+ Sbjct: 437 TIQ 439 >gi|94267501|ref|ZP_01290900.1| conserved hypothetical protein [delta proteobacterium MLMS-1] gi|93451978|gb|EAT02688.1| conserved hypothetical protein [delta proteobacterium MLMS-1] Length = 1069 Score = 84.9 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 31/199 (15%), Positives = 67/199 (33%), Gaps = 10/199 (5%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA---IKNDIDQKISFV 59 +S G++ + ++ + DN++N +T + + F +V+ Q V Sbjct: 5 SSLYAGISGLSTMGNSMNVLGDNIANVNTTAYNASRATFQDVLSQSVATSAGSAQVGRGV 64 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALE---SPRGIILTRDGRFKVTDDGSLVS 116 GSF ST T D A+ G+ +F + S + TR G F+ G+L++ Sbjct: 65 TLTTVDGLFAQGSFESTSTATDMAIGGEGFFMMRGSGSAEADMFTRAGEFRFDTQGNLIN 124 Query: 117 ASG----KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172 +G + V + I + ++ + ++ + Sbjct: 125 PAGHFIQGWQVDKDSGQIEGTIGDINIGRATPPVPTDRIDMIVNLDSRIPRETTEQRLYE 184 Query: 173 ENSGISPNIPPTPLEDLSG 191 +G + + Sbjct: 185 AWNGTNMTGVNPSPPIDAN 203 Score = 83.4 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 25/209 (11%), Positives = 56/209 (26%), Gaps = 13/209 (6%) Query: 36 TIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP 95 + + F + +D E+ ++ A+ G A Sbjct: 866 SDDLDFESELSFQISDYSNPAVPPDPSYEFFGPVETNYH--------AIAGSAEEDGSRL 917 Query: 96 RGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI 155 R + S++ + D + + + + + + Sbjct: 918 GMTASRRFEAEAMATTQYANSSTTIFQDQDGFAAGFLQSVSVDTAGIITGNYSNGQVLMR 977 Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEM 210 A + L QG + + T + LE SN + E Sbjct: 978 AQVALADFANLQGLHKVGGNIFRATTQSGAPVTGQPGTNGLGEIAPNSLEQSNVDLGTEF 1037 Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +MI + F + + +I ++ + E I Sbjct: 1038 VKMITTQRGFQANSKMITTTDEMLNELIN 1066 >gi|86146155|ref|ZP_01064481.1| flagellar hook protein [Vibrio sp. MED222] gi|218708804|ref|YP_002416425.1| flagellar hook protein FlgE [Vibrio splendidus LGP32] gi|85836102|gb|EAQ54234.1| flagellar hook protein [Vibrio sp. MED222] gi|218321823|emb|CAV17792.1| Flagellar hook protein flgE [Vibrio splendidus LGP32] Length = 434 Score = 84.9 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 30/207 (14%), Positives = 68/207 (32%), Gaps = 13/207 (6%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGK 63 + L+ A + L+T ++N++N +T GF+ + +F +V + N + + Sbjct: 3 YVSLSGLSAAQLDLNTTSNNIANANTFGFKESRAEFGDVYSSSLFTNAKTTPGGGAQASQ 62 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWF----ALESPRGIILTRDGRFKVTDDGSLVSASG 119 GS I T +D + G +F P LTR+G F + D +V+A+ Sbjct: 63 VAQQFHEGSSIYTNNPMDLRVSGTGFFAVSKDRMVPEINELTRNGAFHLNKDNYMVTAND 122 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF-------VRR 172 ++ + + E + + ++ + + Sbjct: 123 EFLLGYDVDPNSGEVLSYAPKPLDIPAEFGKPKQTENIEVGVNLPANGDLKDPATFDFKD 182 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFL 199 ++ + +L Sbjct: 183 PDTYNRATSSTVYDSMGQSYKLTTYYL 209 Score = 68.7 bits (166), Expect = 6e-10, Method: Composition-based stats. Identities = 18/145 (12%), Positives = 46/145 (31%), Gaps = 6/145 (4%) Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ-KGKVIATMG 159 T+ F + + + + + + D G S + ++ +G Sbjct: 288 TQVLNFGLDSSTQFAAPFELSRFDEDGATTGFLTKIDFDEYGSVLGSYSNGENVILGRVG 347 Query: 160 LYSVDMSQGFVRRENSGISPNIP-----PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMI 214 L V G ++ + S ++ G LE SN + E+ +I Sbjct: 348 LVRVPNEHGLDKKGGTQWDSTNASGDKIWGESNKGSFGSINNGSLEQSNIDMTQELVDLI 407 Query: 215 HLTQKFNSITTLIDENEKSMLEAIR 239 + F + + ++ + + ++ Sbjct: 408 SAQRNFQANSRSLEVHNQLQQNILQ 432 >gi|107026757|ref|YP_624268.1| flagellar hook protein FlgE [Burkholderia cenocepacia AU 1054] gi|116692051|ref|YP_837584.1| flagellar hook protein FlgE [Burkholderia cenocepacia HI2424] gi|105896131|gb|ABF79295.1| flagellar basal body FlaE [Burkholderia cenocepacia AU 1054] gi|116650051|gb|ABK10691.1| flagellar basal body FlaE domain protein [Burkholderia cenocepacia HI2424] Length = 414 Score = 84.9 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 64/189 (33%), Gaps = 2/189 (1%) Query: 8 GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVASGKEY 65 GL+ L + +N++N +TVGF+ + F+++ Q Sbjct: 6 GLSGLAGASSNLDVIGNNIANANTVGFKQGRANFADMYANSVATSVNTQIGIGTRLASVQ 65 Query: 66 LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125 + G+ ST + LD A+ G+ +F + S +RDG F +G++V A G+ + Sbjct: 66 QNFGQGTINSTKSSLDVAINGNGFFQMSSNGVTTYSRDGTFHRDKNGAIVDAQGRNLMGY 125 Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185 A I + I+ + T + + + Sbjct: 126 AAGAGGMINTAQTVPLQAPTSNIAPRATSKITGQFNLNAQDKVPAKTPFNATDNTTYNYN 185 Query: 186 LEDLSGVTV 194 T+ Sbjct: 186 SSIQVYDTL 194 Score = 67.6 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 13/98 (13%), Positives = 33/98 (33%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLED 201 + + V+ + L + + G V + + + + T++ LE+ Sbjct: 315 YSNGQSAVLGLIALANFNNPNGLVNIGGNQYAETAASGVPQISAPGSTNHGTLQGSALEN 374 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN N E+ +I + + + I + + Sbjct: 375 SNVNLTTELVNLITAQRNYQANAQTIKTQQAVDQTLLN 412 >gi|254698190|ref|ZP_05160018.1| flagellar hook protein FlgE [Brucella abortus bv. 2 str. 86/8/59] gi|260762637|ref|ZP_05874969.1| flagellar hook protein flgE [Brucella abortus bv. 2 str. 86/8/59] gi|260673058|gb|EEX59879.1| flagellar hook protein flgE [Brucella abortus bv. 2 str. 86/8/59] Length = 396 Score = 84.9 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 5/123 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M G++ A RLSTVADN++N TVG++ + +FS +V S V Sbjct: 6 MMR---TGVSGMNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAGQYNSGS-VL 61 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASG 119 + Y + G ST + D ++G+ +F ++ P G TR G F +G LV+++G Sbjct: 62 TDVRYGISDQGGIRSTSSTTDLTIDGNGYFVVQGPGGSTYLTRAGSFVPDKNGDLVNSAG 121 Query: 120 KYP 122 Y Sbjct: 122 YYL 124 Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 10/54 (18%), Positives = 22/54 (40%) Query: 186 LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + + G LE+SNA+ E+ MI + + + + + + M + Sbjct: 340 PQGDGMGKIMSGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGFELMDVLVN 393 >gi|86360902|ref|YP_472789.1| flagellar hook protein FlgE [Rhizobium etli CFN 42] gi|86285004|gb|ABC94062.1| flagellar hook protein [Rhizobium etli CFN 42] Length = 430 Score = 84.9 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 41/163 (25%), Positives = 69/163 (42%), Gaps = 2/163 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 S ++ A RLSTV+DN++N +TVG++ + FS +V + + V + Sbjct: 6 SMKTAVSGMSAQANRLSTVSDNIANANTVGYKAVSTSFSSLVLPSSSG-NYNSGGVQTSV 64 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGKYP 122 + G T + D A+ GD +F +ES G +LTR G F V DG+LV+++G Sbjct: 65 RQAISQQGDISYTTSAYDLAISGDGFFIVESADGTPVLTRAGDFSVDSDGNLVNSAGYTL 124 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 + + + + IA+ Y Sbjct: 125 MGYSYDSGVPAVVVNGFDGLVPVNVAQSGLSAIASTSAYFSGN 167 Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 13/73 (17%), Positives = 27/73 (36%), Gaps = 1/73 (1%) Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 G V N + P + +++ G LE SN + E+ +MI + + + + + Sbjct: 356 SGNVYTANGMSGVTVTGFPQTNG-LGSIQSGALESSNVDLAGELTEMIEAQRSYTANSKV 414 Query: 227 IDENEKSMLEAIR 239 M + Sbjct: 415 FQTGSDIMDVLVN 427 >gi|302185583|ref|ZP_07262256.1| flagellar hook protein FlgE [Pseudomonas syringae pv. syringae 642] Length = 445 Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 35/135 (25%), Positives = 58/135 (42%), Gaps = 4/135 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI---KNDIDQKISFVA 60 SFNIGL+ A + L +N++N T GF++ +++F++ + S V Sbjct: 2 SFNIGLSGLYAANKSLDVTGNNIANVATTGFKSSRIEFADQYAQSIRGTSGGTSVGSGVT 61 Query: 61 SGKEYLSKEVGS-FISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119 + GS TG LD A+ G+ +F L + + TR G F DG +V++SG Sbjct: 62 TAAVSQQFSQGSLTTGTGNSLDLAINGNGFFMLSNKGDSLYTRAGAFHTDKDGYVVNSSG 121 Query: 120 KYPVLDMASVPIQIP 134 + Sbjct: 122 MNLQGYNVDANGTVM 136 Score = 62.6 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 30/98 (30%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLED 201 + + KVI + L S QG + + + V LE+ Sbjct: 346 YTNGQSKVIGQVSLTSFANVQGLAPAGGTNWRETFSSGIPGTGAPQSGTLGYVTGQALEE 405 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ +I + + I M I+ Sbjct: 406 SNVDLTLELVNLIKAQSNYQANAKTISTQSTIMQTTIQ 443 >gi|206558968|ref|YP_002229728.1| flagellar hook protein FlgE [Burkholderia cenocepacia J2315] gi|198035005|emb|CAR50877.1| flagellar hook protein 1 FlgE1 [Burkholderia cenocepacia J2315] Length = 413 Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 27/135 (20%), Positives = 57/135 (42%), Gaps = 2/135 (1%) Query: 8 GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVASGKEY 65 GL+ L + +N++N +TVGF++ +F+++ Q + Sbjct: 6 GLSGLAGASNALDVIGNNIANANTVGFKSSTAQFADMYANSVATSVNTQIGIGTSLNSVQ 65 Query: 66 LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125 G+ +T + LD A+ G+ +F + + +RDG F+ +G +V + G+ + Sbjct: 66 QQFGQGTINTTNSSLDVAINGNGFFQMSNNGVTTYSRDGTFQRDKNGFIVDSQGRNLMGY 125 Query: 126 MASVPIQIPQKDEIF 140 A+ I + Sbjct: 126 AANAGGVINTAQTVP 140 Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 13/125 (10%), Positives = 36/125 (28%), Gaps = 5/125 (4%) Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 D + + + V+ + L + + G V + + Sbjct: 288 NNLAQDGYASGTLTTYSIGADGKLTGNYSNGQTAVLGLIALANFNNPNGLVNLGGNQYAE 347 Query: 180 NIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 + + + T++ LE+SN + ++ +I + + + I + Sbjct: 348 SAASGVPQVSAPGSTNHGTLQGSALENSNVDLTSQLVNLITAQRNYQANAQTIKTQQTVD 407 Query: 235 LEAIR 239 I Sbjct: 408 QTLIN 412 >gi|115353118|ref|YP_774957.1| flagellar hook protein FlgE [Burkholderia ambifaria AMMD] gi|115283106|gb|ABI88623.1| flagellar basal body FlaE domain protein [Burkholderia ambifaria AMMD] Length = 413 Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 32/189 (16%), Positives = 65/189 (34%), Gaps = 2/189 (1%) Query: 8 GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVASGKEY 65 GL+ L + +N++N +TVGF++ +FS++ Q A Sbjct: 6 GLSGLAGASNALDVIGNNIANANTVGFKSSTAQFSDMYANSIATSVNTQIGIGTALSSVQ 65 Query: 66 LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125 G+ +T + LD A+ G+ +F + + +RDG F+ +G +V+A G + Sbjct: 66 QQFGQGTINTTNSSLDVAINGNGFFQMSNNGVTTYSRDGTFQRDKNGYIVNAQGLNLMGY 125 Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185 +A + + IS T + + + Sbjct: 126 LADKNGVVNTAQTVPLQAPTTNISPTATTKITGQFNLNSQDKVPTKTPFDATDTSTYNYS 185 Query: 186 LEDLSGVTV 194 ++ Sbjct: 186 TSVQVYDSL 194 Score = 68.0 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 11/98 (11%), Positives = 33/98 (33%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLED 201 + + V+ + + + + G V + + + + T++ LE+ Sbjct: 315 YSNGQTAVLGQIAIANFNNPNGLVNLGGNQYAETAASGVPQISAPGSTNHGTLQGSALEN 374 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + ++ +I + + + I + I Sbjct: 375 SNVDLTSQLVNLITAQRNYQANAQTIKTQQTVDQTLIN 412 >gi|269138582|ref|YP_003295282.1| flagellar hook protein [Edwardsiella tarda EIB202] gi|267984242|gb|ACY84071.1| flagellar hook protein [Edwardsiella tarda EIB202] gi|304558592|gb|ADM41256.1| Flagellar hook protein FlgE [Edwardsiella tarda FL6-60] Length = 410 Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 31/134 (23%), Positives = 59/134 (44%), Gaps = 6/134 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 F+ ++ A +L + +N++N+ TVGF++ V F+++ + V Sbjct: 2 GFSQAISGMNAASSQLDVIGNNIANSQTVGFKSGSVTFADMFA-----GSKVGLGVTVAS 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122 + G+ +T LD A+ G +F ++ P + TR+G+F G L +A G Y Sbjct: 57 VNQDFKDGTTTTTNRGLDVAISGQGFFRMQDPNGSVYYTRNGQFSKDAKGFLTNAQGMYL 116 Query: 123 VLDMASVPIQIPQK 136 A+ Q+ Sbjct: 117 TGYPAAGTPPTIQQ 130 Score = 74.9 bits (182), Expect = 8e-12, Method: Composition-based stats. Identities = 19/142 (13%), Positives = 44/142 (30%), Gaps = 9/142 (6%) Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162 G + V++ + QI I + G+++ + + Sbjct: 271 TGTRQQNTGKDGVTSKTQDGYKAGELTGYQINDDGTITGSYTNQQKQLLGQIV----MAN 326 Query: 163 VDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLT 217 +G V N+ S + + T + G +E SN + ++ MI Sbjct: 327 FAAPEGLVSEGNNVWSESAKSGQPIVGTSGTSGLGSLTSGAVEASNVDLSKQLVDMIVAQ 386 Query: 218 QKFNSITTLIDENEKSMLEAIR 239 + + S I ++ + + Sbjct: 387 RNYQSNAQTIKTQDQILQTLVN 408 >gi|88799021|ref|ZP_01114602.1| Flagellar hook protein FlgE [Reinekea sp. MED297] gi|88778248|gb|EAR09442.1| Flagellar hook protein FlgE [Reinekea sp. MED297] Length = 1472 Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 37/193 (19%), Positives = 65/193 (33%), Gaps = 5/193 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI--SFVAS 61 SF GL+ A + L +N++N T GF+ + +F + + Q S V Sbjct: 2 SFGSGLSGVAAANKDLKITGNNIANASTTGFKASRAEFGDAYTTSILGMGQDPIGSGVNV 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASGK 120 E G+ T + LD A++G+ +F E P + TR G F + DG +VS G Sbjct: 62 NNVGQKFEQGNISQTNSVLDLAIDGNGFFVTEYPNNSVTYTRSGIFGIDKDGYIVSNQGA 121 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 + + V + + +V ++ S Sbjct: 122 TLQGFGVNENGIVSGILTDLRVDAGSQPPRGTH--GVEAQVNVPAGANVLQSIGSTTRTT 179 Query: 181 IPPTPLEDLSGVT 193 + + Sbjct: 180 GLAVGVAQVGPAQ 192 Score = 62.6 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 19/206 (9%), Positives = 49/206 (23%), Gaps = 9/206 (4%) Query: 39 VKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98 +F + + + + + S G + + P Sbjct: 1269 AEFK--LYFNADGTLDEENTGEWLISNWDPVDENGDSNGAYTSLNVAEGGSLPIPDPNTN 1326 Query: 99 ILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158 T G + + + D+ + + +V+ + Sbjct: 1327 SNFSVSFGGTTQYGGPFARYNFQQDGYASGRLKDLEIDDDGTIYARY--TNGEAQVLGQV 1384 Query: 159 GLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQM 213 L S +G + + T ++ LEDS + ++ + Sbjct: 1385 ALASFANMEGLNPVGQTEWQESFESGDATIGEPGTGLLGTLQSAALEDSTVDLSEQLVHL 1444 Query: 214 IHLTQKFNSITTLIDENEKSMLEAIR 239 I + + + I+ I Sbjct: 1445 IIAQRNYQASAKTIETANAVTQTIIN 1470 >gi|330986468|gb|EGH84571.1| flagellar hook protein FlgE [Pseudomonas syringae pv. lachrymans str. M301315] Length = 441 Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 52/134 (38%), Gaps = 4/134 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA----IKNDIDQKISFV 59 SFNIGL+ A + L +N++N T GF++ + +F++ + Sbjct: 2 SFNIGLSGLYAANKSLDVTGNNIANVATTGFKSSRAEFADQYAQSIRGTSGQTNVGSGVT 61 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119 + + T LD A+ G+ +F L + + TR G F +G +V++ G Sbjct: 62 TAAVSQQFSQGNLTTGTANSLDLAINGNGFFMLSNNGEKLYTRAGAFHTDKEGYVVNSGG 121 Query: 120 KYPVLDMASVPIQI 133 + Sbjct: 122 MKLQGYNVDANGSV 135 Score = 63.0 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 16/123 (13%), Positives = 33/123 (26%), Gaps = 5/123 (4%) Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 D + + + K +VI L + QG + + Sbjct: 317 QDQDGYATGQLSAMSVDATGNLFATYTNGKSQVIGQTSLTNFANVQGLAQAGGTNWRETF 376 Query: 182 PPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + + + LE+SN + E+ +I + + I M Sbjct: 377 ASGVPVSGTPQSGTLGYITGQALEESNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQT 436 Query: 237 AIR 239 I+ Sbjct: 437 TIQ 439 >gi|170735956|ref|YP_001777216.1| flagellar basal body FlaE domain-containing protein [Burkholderia cenocepacia MC0-3] gi|169818144|gb|ACA92726.1| flagellar basal body FlaE domain protein [Burkholderia cenocepacia MC0-3] Length = 414 Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 64/189 (33%), Gaps = 2/189 (1%) Query: 8 GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVASGKEY 65 GL+ L + +N++N +TVGF+ + F+++ Q Sbjct: 6 GLSGLAGASSNLDVIGNNIANANTVGFKQGRANFADMYANSVATSVNTQIGIGTRLASVQ 65 Query: 66 LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125 + G+ ST + LD A+ G+ +F + S +RDG F +G++V A G+ + Sbjct: 66 QNFGQGTINSTKSSLDVAINGNGFFQMSSNGVTTYSRDGTFHRDKNGAIVDAQGRNLMGY 125 Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185 A I + I+ + T + + + Sbjct: 126 AAGAGGVINTAQTVPLQAPTSNIAPRATSKITGQFNLNAQDKVPAKTPFNATDNTTYNYN 185 Query: 186 LEDLSGVTV 194 T+ Sbjct: 186 SSIQVYDTL 194 Score = 68.0 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 13/98 (13%), Positives = 33/98 (33%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLED 201 + + V+ + L + + G V + + + + T++ LE+ Sbjct: 315 YSNGQSAVLGLIALANFNNPNGLVNIGGNQYAETAASGVPQISAPGSTNHGTLQGSALEN 374 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN N E+ +I + + + I + + Sbjct: 375 SNVNLTTELVNLITAQRNYQANAQTIKTQQAVDQTLLN 412 >gi|330875983|gb|EGH10132.1| flagellar hook protein FlgE [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 441 Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 53/134 (39%), Gaps = 4/134 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA----IKNDIDQKISFV 59 SFNIGL+ A + L +N++N T GF++ + +F++ + Sbjct: 2 SFNIGLSGLYAANKSLDVTGNNIANVATTGFKSSRAEFADQYAQSIRGTSGQTNVGSGVS 61 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119 + + T LD A+ G+ +F L + + TR G F +G +V+++G Sbjct: 62 TAAVSQQFSQGNLTTGTANSLDLAINGNGFFMLSNNGEKLYTRAGAFHTDKEGFVVNSAG 121 Query: 120 KYPVLDMASVPIQI 133 + Sbjct: 122 MKLQGYNVDANGSV 135 Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 16/123 (13%), Positives = 34/123 (27%), Gaps = 5/123 (4%) Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 D + + + K +VI L + QG + + Sbjct: 317 QDQDGYATGQLSAMSVDSTGNLFATYTNGKSQVIGQTSLTNFANVQGLAQAGGTNWRETF 376 Query: 182 PPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + + ++ LE+SN + E+ +I + + I M Sbjct: 377 ASGVPVSGTPQSGTLGSITGQALEESNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQT 436 Query: 237 AIR 239 I+ Sbjct: 437 TIQ 439 >gi|291536012|emb|CBL09124.1| fagellar hook-basal body proteins [Roseburia intestinalis M50/1] Length = 551 Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 24/150 (16%), Positives = 54/150 (36%), Gaps = 19/150 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M S ++ + ++ + +N++N +TV F++ V F +V+ + ++ + Sbjct: 1 MMRSMYSAVSGLKTHQTKMDVIGNNIANVNTVAFKSSSVVFQDVLYQMTSNASGANAATG 60 Query: 61 S---------------GKEYLSKEVGSFISTGTELDFALEGD---AWFALESPRGIILTR 102 + G+ +TG D L +F + + + TR Sbjct: 61 TGGVNAKQIGLGVTTGATNLSITTSGAAETTGRAFDIRLSDQSTTNFFVVNNGSENLFTR 120 Query: 103 DGRFKVTDDGSLV-SASGKYPVLDMASVPI 131 G F V G+L +++G + Sbjct: 121 AGSFYVDGAGNLCMTSTGYTVMGWQVDPTT 150 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 14/129 (10%), Positives = 40/129 (31%), Gaps = 6/129 (4%) Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + + I + + + + + + + + G + + Sbjct: 420 SIDDGVTGKGKKLGAMIGISIDNNGLITGIYDNGNKETLGQIAVAQFANASGLEKVGENC 479 Query: 177 ISPNIPPTPLEDLSG------VTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + + + ++ G LE SN + E QMI + F + + +I + Sbjct: 480 YRTTLNSGEFDGIGDEISADGSSMTSGELEMSNVDLSTEFTQMIITQRGFQANSRIITTS 539 Query: 231 EKSMLEAIR 239 + + E + Sbjct: 540 DTLLEELVN 548 >gi|320529456|ref|ZP_08030543.1| fagellar hook-basal body protein [Selenomonas artemidis F0399] gi|320138293|gb|EFW30188.1| fagellar hook-basal body protein [Selenomonas artemidis F0399] Length = 661 Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 12/121 (9%) Query: 19 LSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLS----------- 67 + + +N++N +T GF+ +V F++++ + + V Sbjct: 1 MDVIGNNIANVNTTGFKASRVTFADMISQNLSGASSPGTTVGGTNPKQIGLGTSVSSVDL 60 Query: 68 -KEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDM 126 G STG D AL G+ F ++ TR+G F+ DG+ V + V Sbjct: 61 LFNDGVAQSTGKNTDVALSGNGTFVVKKGNETYYTRNGAFEFDADGNYVMPGSGHYVQGW 120 Query: 127 A 127 Sbjct: 121 M 121 Score = 76.1 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 23/143 (16%), Positives = 42/143 (29%), Gaps = 6/143 (4%) Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG--KVIATMGL 160 DG G V + I G + A + + Sbjct: 516 DGSITCNLAGLTQYVGNNTIVGTTNGHKKGVLTSVSIDQSGVITGTYDNNVRQAEAQIAV 575 Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLE----DLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + + G + S + P + GV++ LE SN N + MI Sbjct: 576 AQFNNATGLTKMGGSLYQESNNSGPANIKTANDLGVSMTPSALEMSNVNIADQFSDMIIT 635 Query: 217 TQKFNSITTLIDENEKSMLEAIR 239 + F S + +I +++ + I Sbjct: 636 QRGFQSNSKIITVSDEMLETLIN 658 >gi|330889085|gb|EGH21746.1| flagellar hook protein FlgE [Pseudomonas syringae pv. mori str. 301020] Length = 441 Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 52/134 (38%), Gaps = 4/134 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA----IKNDIDQKISFV 59 SFNIGL+ A + L +N++N T GF++ + +F++ + Sbjct: 2 SFNIGLSGLYAANKSLDVTGNNIANVATTGFKSSRAEFADQYAQSIRGTSGQTNVGSGVT 61 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119 + + T LD A+ G+ +F L + + TR G F +G +V++ G Sbjct: 62 TAAVSQQFTQGNLTTGTANSLDLAINGNGFFMLSNNGEKLYTRAGAFHTDKEGYVVNSGG 121 Query: 120 KYPVLDMASVPIQI 133 + Sbjct: 122 MKLQGYNVDANGSV 135 Score = 62.6 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 16/123 (13%), Positives = 33/123 (26%), Gaps = 5/123 (4%) Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 D + + + K +VI L + QG + + Sbjct: 317 QDQDGYATGQLSAMSVDATGNLFATYTNGKSQVIGQTSLTNFANVQGLAQAGGTNWRETF 376 Query: 182 PPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + + + LE+SN + E+ +I + + I M Sbjct: 377 ASGVPVSGTPQSGTLGYITGQALEESNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQT 436 Query: 237 AIR 239 I+ Sbjct: 437 TIQ 439 >gi|91225873|ref|ZP_01260842.1| flagellar hook protein E [Vibrio alginolyticus 12G01] gi|269965424|ref|ZP_06179543.1| flagellar hook protein [Vibrio alginolyticus 40B] gi|91189523|gb|EAS75799.1| flagellar hook protein E [Vibrio alginolyticus 12G01] gi|269829903|gb|EEZ84133.1| flagellar hook protein [Vibrio alginolyticus 40B] Length = 437 Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 30/200 (15%), Positives = 72/200 (36%), Gaps = 7/200 (3%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGK 63 + L+ A + L+T ++N++N +T GF+ + +F++V N + + Sbjct: 3 YVSLSGLSAAQLDLNTTSNNIANANTYGFKESRAEFADVYSNSLFTNAKTTPGGGAQASQ 62 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWF----ALESPRGIILTRDGRFKVTDDGSLVSASG 119 GS I T +D + G +F +P+ LTR+G F + + +V+A+ Sbjct: 63 VAQQFHEGSSIYTNNPMDLRVSGTGFFAVAKERLTPQQNELTRNGAFHLNKENYMVTAND 122 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV-RRENSGIS 178 ++ + E + E + + ++ + + Sbjct: 123 EFLLGYQVDPSSGEVSSYEPQPINIPAEFGKPKQTANIEVGVNLPANGDLKDPTQFDFSD 182 Query: 179 PNIPPTPLEDLSGVTVKRGF 198 P+ ++ + + Sbjct: 183 PDTYNRSTSSTIYDSMGQSY 202 Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 34/98 (34%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI-----PPTPLEDLSGVTVKRGFLED 201 + + + + L V QG ++ + S T+ G LE Sbjct: 338 YSNGENVTLGRVALVRVPNEQGLDKKGGTQWDSTQFSGDKIWGESNKGSFGTINNGMLEQ 397 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ +I + F + + ++ + + ++ Sbjct: 398 SNIDMTQELVDLISAQRNFQANSRSLEVHNQLQQNILQ 435 >gi|298487857|ref|ZP_07005897.1| Flagellar hook protein flgE [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298157582|gb|EFH98662.1| Flagellar hook protein flgE [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 441 Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 52/134 (38%), Gaps = 4/134 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA----IKNDIDQKISFV 59 SFNIGL+ A + L +N++N T GF++ + +F++ + Sbjct: 2 SFNIGLSGLYAANKSLDVTGNNIANVATTGFKSSRAEFADQYAQSIRGTSGQTNVGSGVT 61 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119 + + T LD A+ G+ +F L + + TR G F +G +V++ G Sbjct: 62 TAAVSQQFSQGNLTTGTANSLDLAINGNGFFMLSNNGEKLYTRAGAFHTDKEGYVVNSGG 121 Query: 120 KYPVLDMASVPIQI 133 + Sbjct: 122 MKLQGYNVDANGSV 135 Score = 63.0 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 16/123 (13%), Positives = 33/123 (26%), Gaps = 5/123 (4%) Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 D + + + K +VI L + QG + + Sbjct: 317 QDQDGYATGQLSAMSVDATGNLFATYTNGKSQVIGQTSLTNFANVQGLAQAGGTNWRETF 376 Query: 182 PPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + + + LE+SN + E+ +I + + I M Sbjct: 377 ASGVPVSGTPQSGTLGYITGQALEESNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQT 436 Query: 237 AIR 239 I+ Sbjct: 437 TIQ 439 >gi|71736953|ref|YP_275563.1| flagellar hook protein FlgE [Pseudomonas syringae pv. phaseolicola 1448A] gi|257484949|ref|ZP_05638990.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tabaci ATCC 11528] gi|71557506|gb|AAZ36717.1| flagellar hook protein FlgE [Pseudomonas syringae pv. phaseolicola 1448A] gi|320325093|gb|EFW81162.1| flagellar hook protein FlgE [Pseudomonas syringae pv. glycinea str. B076] gi|320329352|gb|EFW85345.1| flagellar hook protein FlgE [Pseudomonas syringae pv. glycinea str. race 4] gi|331011042|gb|EGH91098.1| flagellar hook protein FlgE [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 441 Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 52/134 (38%), Gaps = 4/134 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA----IKNDIDQKISFV 59 SFNIGL+ A + L +N++N T GF++ + +F++ + Sbjct: 2 SFNIGLSGLYAANKSLDVTGNNIANVATTGFKSSRAEFADQYAQSIRGTSGQTNVGSGVT 61 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119 + + T LD A+ G+ +F L + + TR G F +G +V++ G Sbjct: 62 TAAVSQQFSQGNLTTGTANSLDLAINGNGFFMLSNNGEKLYTRAGAFHTDKEGYVVNSGG 121 Query: 120 KYPVLDMASVPIQI 133 + Sbjct: 122 MKLQGYNVDANGSV 135 Score = 63.0 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 16/123 (13%), Positives = 33/123 (26%), Gaps = 5/123 (4%) Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 D + + + K +VI L + QG + + Sbjct: 317 QDQDGYATGQLSAMSVDATGNLFATYTNGKSQVIGQTSLTNFANVQGLAQAGGTNWRETF 376 Query: 182 PPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + + + LE+SN + E+ +I + + I M Sbjct: 377 ASGVPVSGTPQSGTLGYITGQALEESNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQT 436 Query: 237 AIR 239 I+ Sbjct: 437 TIQ 439 >gi|261856360|ref|YP_003263643.1| flagellar hook-basal body protein [Halothiobacillus neapolitanus c2] gi|261836829|gb|ACX96596.1| flagellar hook-basal body protein [Halothiobacillus neapolitanus c2] Length = 418 Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 31/198 (15%), Positives = 67/198 (33%), Gaps = 5/198 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG--AIKNDIDQKISFVAS 61 SFN + A ++ L ++N++N ++ GF++ + +F ++ A N V + Sbjct: 2 SFNTSITGLNAAQKDLDVTSNNIANANSTGFKSSRAQFGDIYAVSAYGNSKTATGQGVLT 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESP---RGIILTRDGRFKVTDDGSLVSAS 118 GS T LD A+ G +F + + +R G DG +V+ + Sbjct: 62 EAVQQQFTQGSLQFTNNSLDLAISGQGFFTFQPTLDSLQSVYSRAGALGANKDGFIVNTN 121 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178 G+Y S + + ++ T+ S ++ + Sbjct: 122 GQYLKALPVSANGTLQSTSLASAKPIQLPVAAGAPKATTLVTQSFNLPASATVPTVTPFD 181 Query: 179 PNIPPTPLEDLSGVTVKR 196 + ++ Sbjct: 182 TTQATPDPASYTQANSQQ 199 Score = 71.8 bits (174), Expect = 7e-11, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 35/98 (35%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLED 201 + + + + L + QG + N+ + ++ T ++ G LE Sbjct: 319 YSNGQNIPLGMVALANFSNPQGLKQVGNNSWAESVDSGAPTAGQPGTGTFGLIQGGALEQ 378 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + ++ +I + F + I ++ + I Sbjct: 379 SNVDLTQQLVNLITAQRNFQANAQAIQTDKTATDSVIN 416 >gi|94264101|ref|ZP_01287900.1| conserved hypothetical protein [delta proteobacterium MLMS-1] gi|93455517|gb|EAT05707.1| conserved hypothetical protein [delta proteobacterium MLMS-1] Length = 1058 Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 36/199 (18%), Positives = 66/199 (33%), Gaps = 10/199 (5%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA---IKNDIDQKISFV 59 +S G++ + ++ + DN++N +T F + + F +V+ + Q V Sbjct: 5 SSLYAGISGLSTMGNSMNVLGDNIANVNTTAFNSSRATFQDVLSQSVATSAGVAQVGRGV 64 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALE---SPRGIILTRDGRFKVTDDGSLVS 116 GSF ST T D A+ G+ +F + S + TR G F+ G+L S Sbjct: 65 TLTTVDGLFAQGSFESTSTATDMAIGGEGFFMMRASGSAEADMFTRAGEFRFDTQGNLTS 124 Query: 117 ASG----KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172 +G + V + Q ++ Q Sbjct: 125 PAGHFIQGWQVDSATGQSFGTIGDINLSRSTPPVRTEQVEMIVNLDSREQPASQQRLFDA 184 Query: 173 ENSGISPNIPPTPLEDLSG 191 + + PT D + Sbjct: 185 WDGTNMAAVNPTAPIDDAN 203 Score = 81.8 bits (200), Expect = 7e-14, Method: Composition-based stats. Identities = 25/166 (15%), Positives = 48/166 (28%), Gaps = 6/166 (3%) Query: 80 LDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEI 139 DF + S RG +++R + ++S + Sbjct: 890 TDFHAIAGSLEEDGSQRGTVVSRSFETEAMSTTQYANSSTTIYQDQDGFAAGFLQSVSVD 949 Query: 140 FNVGEKGEISQKGKVI-ATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT----- 193 G S ++ A + L QG + + T Sbjct: 950 TGGIITGNYSNGQVLMQAQVALADFANLQGLHKVGGNIFRATTQSGAPVTGMPGTNGLGE 1009 Query: 194 VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + LE SN + E +MI + F + + +I ++ + E I Sbjct: 1010 IAPNSLEQSNVDLGTEFVKMITTQRGFQANSKMITTTDEMLNELIN 1055 >gi|28897552|ref|NP_797157.1| flagellar hook protein FlgE [Vibrio parahaemolyticus RIMD 2210633] gi|153839685|ref|ZP_01992352.1| FlgE [Vibrio parahaemolyticus AQ3810] gi|260364611|ref|ZP_05777213.1| flagellar hook protein FlgE [Vibrio parahaemolyticus K5030] gi|260878284|ref|ZP_05890639.1| flagellar hook protein FlgE [Vibrio parahaemolyticus AN-5034] gi|260898114|ref|ZP_05906610.1| flagellar hook protein FlgE [Vibrio parahaemolyticus Peru-466] gi|5361008|gb|AAD42915.1|U12817_9 polar flagellar FlgE homolog [Vibrio parahaemolyticus] gi|28805764|dbj|BAC59041.1| polar flagellar FlgE [Vibrio parahaemolyticus RIMD 2210633] gi|149746795|gb|EDM57783.1| FlgE [Vibrio parahaemolyticus AQ3810] gi|308086119|gb|EFO35814.1| flagellar hook protein FlgE [Vibrio parahaemolyticus Peru-466] gi|308090147|gb|EFO39842.1| flagellar hook protein FlgE [Vibrio parahaemolyticus AN-5034] gi|308115102|gb|EFO52642.1| flagellar hook protein FlgE [Vibrio parahaemolyticus K5030] gi|328473453|gb|EGF44301.1| flagellar hook protein FlgE [Vibrio parahaemolyticus 10329] Length = 437 Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 29/200 (14%), Positives = 72/200 (36%), Gaps = 7/200 (3%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGK 63 + L+ A + L+T ++N++N +T GF+ + +F++V N + + Sbjct: 3 YVSLSGLSAAQLDLNTTSNNIANANTYGFKESRAEFADVYSNSLFTNAKTTPGGGAQASQ 62 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWF----ALESPRGIILTRDGRFKVTDDGSLVSASG 119 GS I T +D + G +F P+ +TR+G F + + +V+A+ Sbjct: 63 VAQQFHEGSSIYTNNPMDLRVSGTGFFAVAKDRLIPQQNEMTRNGAFHLNKENYMVTAND 122 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV-RRENSGIS 178 ++ + + E + E + + ++ + + Sbjct: 123 EFLLGYQVNPESGEVSSYEPQPINIPAEFGKPKQTANIEVGVNLPANGDLKDPTQFDFSD 182 Query: 179 PNIPPTPLEDLSGVTVKRGF 198 P+ ++ + + Sbjct: 183 PDTYNRSTSSTIYDSMGQSY 202 Score = 65.7 bits (158), Expect = 5e-09, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 34/98 (34%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI-----PPTPLEDLSGVTVKRGFLED 201 + + + + L V QG ++ + S T+ G LE Sbjct: 338 YSNGENVTLGRVALVRVPNEQGLDKKGGTQWDSTQFSGDKIWGESNKGSFGTINNGMLEQ 397 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ +I + F + + ++ + + ++ Sbjct: 398 SNIDMTQELVDLISAQRNFQANSRSLEVHNQLQQNILQ 435 >gi|83718065|ref|YP_438389.1| flagellar hook protein flgE [Burkholderia thailandensis E264] gi|167614837|ref|ZP_02383472.1| flagellar hook protein flgE [Burkholderia thailandensis Bt4] gi|257141422|ref|ZP_05589684.1| flagellar hook protein flgE [Burkholderia thailandensis E264] gi|83651890|gb|ABC35954.1| flagellar hook protein flgE [Burkholderia thailandensis E264] Length = 395 Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 71/197 (36%), Gaps = 7/197 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SFNI L+ A+ +L+T++ N++N +T GF+ + F+ +V + + S S Sbjct: 2 SFNIALSGINAINSQLNTISHNIANANTYGFKAGRANFATMVAGTQANGTYIGSITQSVG 61 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLVSASGKYP 122 + TG LD A++G+ +F + G + TR G F+ DG +V G+ Sbjct: 62 TRGGF-----LPTGRALDGAIDGNGFFVTKDSDGSMLFTRFGYFQRDADGYIVDGFGRRA 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + + + + ++ + + S Sbjct: 117 QGYGTGGAYGDIRVPTDTEPAKASDSLEYVGNLSADWD-APKNPTFDKDDDTSFNHSVAS 175 Query: 183 PTPLEDLSGVTVKRGFL 199 V + F+ Sbjct: 176 TVYDSLGRQHIVTQYFV 192 Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 12/92 (13%), Positives = 33/92 (35%), Gaps = 5/92 (5%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYE 209 + ++ L + G ++ + + V G LE SNA+ E Sbjct: 304 VGSLALATFANQDGLTAVGDTAWRASAASGNPLIGSAGSGALGKVVAGSLELSNADVTKE 363 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 + M+ + + + + ++ + M ++ + Sbjct: 364 LVDMMSAQRNYQANSKVLSTENQMMQALMQAL 395 >gi|78067837|ref|YP_370606.1| flagellar hook protein FlgE [Burkholderia sp. 383] gi|77968582|gb|ABB09962.1| conserved hypothetical protein [Burkholderia sp. 383] Length = 413 Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 29/189 (15%), Positives = 66/189 (34%), Gaps = 2/189 (1%) Query: 8 GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGKEY 65 GL+ L + +N++N +TVGF++ +F+++ + Q + Sbjct: 6 GLSGLAGASNALDVIGNNIANANTVGFKSSTAQFADMYANSVATSTNTQIGIGTSLNAVQ 65 Query: 66 LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125 + G+ +T + LD A+ G+ +F + + +RDG F+ +G +V + G+ + Sbjct: 66 QNFGQGTINTTSSSLDVAINGNGFFQMSNNGVTTYSRDGTFQRDKNGFIVDSQGRNLMGY 125 Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185 A+ I + I+ + + S Sbjct: 126 AANAGGVINTAQTVPLQAPTTNIAPTATTKISAQFNLNSQDTTPTKTPFSATDNTTYNYS 185 Query: 186 LEDLSGVTV 194 ++ Sbjct: 186 TSIQVYDSL 194 Score = 65.3 bits (157), Expect = 8e-09, Method: Composition-based stats. Identities = 12/125 (9%), Positives = 35/125 (28%), Gaps = 5/125 (4%) Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 D + + + V+ + L + + G V + + Sbjct: 288 NNLAQDGYASGTLTTYTIGADGKLTGNYSNGQTAVLGEIALANFNNPNGLVNLGGNQYAE 347 Query: 180 NIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 + + + ++ LE+SN + ++ +I + + + I + Sbjct: 348 SAASGVPQISAPGSTNHGKLQGSALENSNVDLTSQLVNLITAQRNYQANAQTIKTQQAVD 407 Query: 235 LEAIR 239 I Sbjct: 408 QTIIN 412 >gi|77165838|ref|YP_344363.1| hypothetical protein Noc_2375 [Nitrosococcus oceani ATCC 19707] gi|254433154|ref|ZP_05046662.1| conserved domain protein [Nitrosococcus oceani AFC27] gi|76884152|gb|ABA58833.1| conserved hypothetical protein [Nitrosococcus oceani ATCC 19707] gi|207089487|gb|EDZ66758.1| conserved domain protein [Nitrosococcus oceani AFC27] Length = 425 Score = 84.1 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 32/132 (24%), Positives = 56/132 (42%), Gaps = 5/132 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG--AIKNDIDQKISFVAS 61 +FN L+ A L A+N++N T GF+ + +F+++ + S V Sbjct: 2 AFNTSLSGLNAASSDLDITANNIANASTTGFKRSRGEFADIFAVSSFGRSQTAVGSGVLL 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWF---ALESPRGIILTRDGRFKVTDDGSLVSAS 118 K E G+ T LD A+ G F + ++ +R G F V +G +V++S Sbjct: 62 NKTAQQFEQGNLDFTQNSLDLAISGRGLFALSPSLNSDDLVYSRAGAFSVDKEGYVVNSS 121 Query: 119 GKYPVLDMASVP 130 G+Y + Sbjct: 122 GQYLRTFPTNAN 133 Score = 75.3 bits (183), Expect = 8e-12, Method: Composition-based stats. Identities = 15/123 (12%), Positives = 34/123 (27%), Gaps = 5/123 (4%) Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 D + + + + + + + L QG + N+ + + Sbjct: 301 LNQDGFTSGRLTGLDISNTGIIQANYSNGQNSTLGKIALAQFPNEQGLRQLGNNAWAETV 360 Query: 182 PPTPLEDLS-----GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 ++ G LE SN + E+ +I + F + I+ Sbjct: 361 SSGTALAGEAGVGSFGLIQTGALESSNVDLTAELVHLITAQRNFQANAKAIETASTVTDT 420 Query: 237 AIR 239 I Sbjct: 421 IIN 423 >gi|167585194|ref|ZP_02377582.1| flagellar hook protein FlgE [Burkholderia ubonensis Bu] Length = 269 Score = 84.1 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 28/129 (21%), Positives = 56/129 (43%), Gaps = 2/129 (1%) Query: 8 GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVASGKEY 65 GL+ L + +N++N +TVGF++ +F+++ Q Sbjct: 6 GLSGLSGASNALDVIGNNIANANTVGFKSSTAQFADMYANSVATSVNTQIGIGTRISSVQ 65 Query: 66 LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125 S G+ +T LD A+ G+ +F + + + +RDG F+ +G +V + G+ + Sbjct: 66 QSFGQGTINTTNNALDVAINGNGFFQMSNNGVVTYSRDGTFQRDKNGFIVDSQGRNLMGY 125 Query: 126 MASVPIQIP 134 A+ I Sbjct: 126 NATAGGVIN 134 >gi|330961196|gb|EGH61456.1| flagellar hook protein FlgE [Pseudomonas syringae pv. maculicola str. ES4326] Length = 442 Score = 84.1 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 31/134 (23%), Positives = 55/134 (41%), Gaps = 4/134 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS----FV 59 SFNIGL+ A + L +N++N T GF++ + +F++ K S + Sbjct: 2 SFNIGLSGLYAANKSLDVTGNNIANVATTGFKSSRTEFADQYAQSIRGTSGKSSVGSGVM 61 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119 + + T LD A+ GD +F L + + TR G F +G +V+++G Sbjct: 62 TAAVSQQFSQGSLTTGTANSLDLAINGDGFFMLSNNGEKLYTRAGAFHTDKEGFVVNSTG 121 Query: 120 KYPVLDMASVPIQI 133 + Sbjct: 122 MKLQGYNVDANGDV 135 Score = 64.1 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 15/98 (15%), Positives = 29/98 (29%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLED 201 + + K I L S QG + + + + + LE+ Sbjct: 343 YTNGQSKTIGQTSLTSFANVQGLAQAGGTNWRETFDSGVPVSGAPQSGTLGYITGQALEE 402 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ +I + + I M I+ Sbjct: 403 SNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQTTIQ 440 >gi|323495377|ref|ZP_08100454.1| flagellar hook protein FlgE [Vibrio brasiliensis LMG 20546] gi|323310300|gb|EGA63487.1| flagellar hook protein FlgE [Vibrio brasiliensis LMG 20546] Length = 434 Score = 84.1 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 30/129 (23%), Positives = 57/129 (44%), Gaps = 6/129 (4%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGK 63 + L+ A + L+T ++N++N +T GF+ + +F +V + V + K Sbjct: 3 YVALSGLSAAQLDLNTTSNNIANANTFGFKESRAEFGDVYSNSLFTHAKTTPGQGVQAAK 62 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWF----ALESPRGIILTRDGRFKVTDDGSLVSASG 119 GS I T +D + G +F SP LTR+G F + D +V+A+ Sbjct: 63 VAQQFHEGSSIYTNNPMDLRISGTGFFAVAKDRLSPTTNELTRNGAFHLNKDNYMVTAND 122 Query: 120 KYPVLDMAS 128 ++ + + Sbjct: 123 EFLLGYQVN 131 Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 36/98 (36%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI-----PPTPLEDLSGVTVKRGFLED 201 + + ++ + L V QG ++ + S T+ G LE Sbjct: 335 YSNGENIILGRVSLVRVANEQGLDKKGGTQWDSTQFSGDKIWGESNKGSFGTISSGTLEQ 394 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ +I + F + + ++ + ++ ++ Sbjct: 395 SNIDMTQELVDLISAQRNFQANSRSLEVHNQTQQNILQ 432 >gi|288940409|ref|YP_003442649.1| fagellar hook-basal body protein [Allochromatium vinosum DSM 180] gi|288895781|gb|ADC61617.1| fagellar hook-basal body protein [Allochromatium vinosum DSM 180] Length = 436 Score = 84.1 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 12/98 (12%), Positives = 34/98 (34%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLED 201 + K V+ + + + QG + ++ + +++ LE+ Sbjct: 337 YSNGKSYVLGQVAMANFKNPQGLQQLGDNNWGESYNSGEPIYAAAGDGRLGSIQSCALEN 396 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ MI + + + I +++ + Sbjct: 397 SNVDLSQELVNMITAQRNYEANAKTISTSDQMTQTILN 434 Score = 82.6 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 35/132 (26%), Positives = 65/132 (49%), Gaps = 4/132 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND-IDQKISFVASG 62 SF+IGL+ A + L +N++N+ T+GF+ + +F+++ + +++ V Sbjct: 2 SFSIGLSGLQAAAKDLEVTGNNVANSGTIGFKKSRAEFADIYASSFYTCVNKSAVGVRLD 61 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI---ILTRDGRFKVTDDGSLVSASG 119 G+ T LD A+ G+ +F L S G + TR+G F+V DG +V++SG Sbjct: 62 AVTQQFSQGNVELTDNTLDLAINGEGFFVLNSEAGQDGKVYTRNGAFQVDRDGYVVNSSG 121 Query: 120 KYPVLDMASVPI 131 + + P Sbjct: 122 QRLQAYPPTTPN 133 >gi|134297198|ref|YP_001120933.1| flagellar hook protein FlgE [Burkholderia vietnamiensis G4] gi|134140355|gb|ABO56098.1| flagellar basal body FlaE domain protein [Burkholderia vietnamiensis G4] Length = 413 Score = 84.1 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 30/149 (20%), Positives = 58/149 (38%), Gaps = 2/149 (1%) Query: 8 GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVASGKEY 65 GL+ L + +N++N +TVGF++ +FS++ Q G Sbjct: 6 GLSGLAGASNALDVIGNNIANANTVGFKSSTAQFSDMYANSIATSVNTQIGIGTTLGSVQ 65 Query: 66 LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125 G+ +T + LD A+ G+ +F + + +RDG F+ +G +V+A G + Sbjct: 66 KQFGQGTINTTNSSLDVAINGNGFFQMSNNGVTTYSRDGTFQRDKNGYIVNAQGMNLMGY 125 Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKV 154 A + + I+ Sbjct: 126 AADKNGVVSTAQTVPLQAPTSNIAPTPTT 154 Score = 68.4 bits (165), Expect = 8e-10, Method: Composition-based stats. Identities = 22/212 (10%), Positives = 55/212 (25%), Gaps = 9/212 (4%) Query: 34 FRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE 93 F E ++ + V S A G F++ Sbjct: 204 FVKSAAGAWEAYAGVQGGTTTDLGTVKFDSSGAITSTTLPASA---TPTASLGQFQFSVP 260 Query: 94 SPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ-KG 152 + G + +T G + + + G S + Sbjct: 261 TTDGSSTPQALTLDLTGTTQYGGKDGVNNLAQDGYASGTLTTFSIGADGKLTGNYSNGQT 320 Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSM 207 V+ + + + + G + + + + + T++ LE+SN + Sbjct: 321 AVLGQIAIANFNNPNGLINLGGNQYAETAASGVPQISAPGSTNHGTLQGSALENSNVDLT 380 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 ++ +I + + + I + I Sbjct: 381 SQLVNLITAQRNYQANAQTIKTQQTVDQTLIN 412 >gi|238919259|ref|YP_002932774.1| flagellar hook protein FlgE [Edwardsiella ictaluri 93-146] gi|238868828|gb|ACR68539.1| flagellar hook protein FlgE [Edwardsiella ictaluri 93-146] Length = 424 Score = 84.1 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 31/134 (23%), Positives = 61/134 (45%), Gaps = 6/134 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 F+ ++ A +L + +N++N+ TVGF++ V F+++ + V Sbjct: 2 GFSQAISGMNAASTQLDVIGNNIANSQTVGFKSGSVTFADMFA-----GSKIGLGVKVAS 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLVSASGKYP 122 + G+ +T LD A+ G +F +++P G + +R+G+F G L +A G Y Sbjct: 57 VDQDFKDGATTTTNRALDVAISGQGFFRMQAPNGSVNYSRNGQFTKDAKGFLTNAQGLYL 116 Query: 123 VLDMASVPIQIPQK 136 A+ Q+ Sbjct: 117 TGYPAAGTPPTIQQ 130 Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 13/98 (13%), Positives = 35/98 (35%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLED 201 +Q+ +++ + + + +G N+ S + T+ G +E Sbjct: 325 YTNQQKQLLGQIVMANFADPEGLTSEGNNEWSESAKSGQPIIGTSGTSGLGTLTSGAVEA 384 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + ++ MI + + S I ++ + + Sbjct: 385 SNVDLSKQLVDMIVAQRNYQSNAQTIKTQDQILQTLVN 422 >gi|261253614|ref|ZP_05946187.1| flagellar hook protein FlgE [Vibrio orientalis CIP 102891] gi|260937005|gb|EEX92994.1| flagellar hook protein FlgE [Vibrio orientalis CIP 102891] Length = 434 Score = 84.1 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 57/129 (44%), Gaps = 6/129 (4%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGK 63 + L+ A + L+T ++N++N +T GF+ + +F +V + V + K Sbjct: 3 YVALSGLSAAQLDLNTTSNNIANANTYGFKESRAEFGDVYSNSLFTHAKTTPGQGVQAAK 62 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWF----ALESPRGIILTRDGRFKVTDDGSLVSASG 119 GS I T +D + G +F +P LTR+G F + D +V+A+ Sbjct: 63 VAQQFHEGSSIYTNNPMDLRIGGTGFFAVAKDRLTPTSNELTRNGAFHLNKDNYMVTAND 122 Query: 120 KYPVLDMAS 128 ++ + + Sbjct: 123 EFLLGYQVN 131 Score = 67.6 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 12/98 (12%), Positives = 36/98 (36%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI-----PPTPLEDLSGVTVKRGFLED 201 + + ++ + + V QG ++ + S ++ G LE Sbjct: 335 YSNGENIILGRVAMVRVANEQGLDKKGGTQWDSTQFSGDKIWGESNKGSFGSISSGTLEQ 394 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ +I + F + + ++ + ++ ++ Sbjct: 395 SNIDMTQELVDLISAQRNFQANSRSLEVHNQTQQNILQ 432 >gi|170725955|ref|YP_001759981.1| flagellar hook protein FlgE [Shewanella woodyi ATCC 51908] gi|169811302|gb|ACA85886.1| flagellar basal body FlaE domain protein [Shewanella woodyi ATCC 51908] Length = 453 Score = 84.1 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 36/183 (19%), Positives = 67/183 (36%), Gaps = 5/183 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61 SFNI L+ A ++ L+T A+N++N +++GF+ + +F++V N + Sbjct: 2 SFNIALSGISAAQKDLNTTANNIANVNSIGFKESRAEFADVYANSIFANSKTAVGGGATT 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALE---SPRGIILTRDGRFKVTDDGSLVSAS 118 + GS T LD A+ G +F + TR G FKV + LV + Sbjct: 62 SQVAQQFHQGSLQFTNNALDMAINGGGFFVTSSSLDSQDHTFTRAGAFKVDSNNYLVDSQ 121 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178 G + + + ++++ G + + Sbjct: 122 GNFLQTFGVDKDGNSTSVSLTTTSPVIIPDTAGSPKMTDEIGIQMNLNAGDDTLDPAAFD 181 Query: 179 PNI 181 PN Sbjct: 182 PND 184 Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 15/138 (10%), Positives = 40/138 (28%), Gaps = 5/138 (3%) Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 + D +V + + + +A + L Sbjct: 314 YNNPTQYASTFEVTELTQDGTTVGRLTNVEVGADGLINASYSNGSTVPLARVALARFANE 373 Query: 167 QGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221 QG + N+ ++ + +++ LE SN + E+ +I + F Sbjct: 374 QGLTQVGNTSWKASLDSGLALAGEANSGTFGSIRSSALEQSNVDLTTELVDLISAQRNFQ 433 Query: 222 SITTLIDENEKSMLEAIR 239 + + ++ N ++ Sbjct: 434 ANSRTLEVNNTLQQTVLQ 451 >gi|115523193|ref|YP_780104.1| flagellar hook protein FlgE [Rhodopseudomonas palustris BisA53] gi|115517140|gb|ABJ05124.1| flagellar basal body FlaE domain protein [Rhodopseudomonas palustris BisA53] Length = 411 Score = 84.1 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 2/123 (1%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 G + A +LSTVADN++N +T G++ +FS ++ + V + Sbjct: 7 MRTGGSGMNAQSNKLSTVADNIANVNTTGYKRASTEFSSLILKSGS-GSYNSGSVETQVR 65 Query: 65 YLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGKYPV 123 Y + G+ T + D A++G+ +FA+ RG LTR G F +G+LV+A G Y + Sbjct: 66 YAISDPGTTQYTTSATDLAIQGNGFFAVADARGTPFLTRAGSFVPDGEGNLVNAGGYYLL 125 Query: 124 LDM 126 Sbjct: 126 GYN 128 Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 23/183 (12%), Positives = 48/183 (26%), Gaps = 9/183 (4%) Query: 66 LSKEVGSFISTGTELDFALEGDAWFALESPRGIILT----RDGRFKVTDDGSLVSASGKY 121 + + D + G SP + LT ++ + + Sbjct: 226 FPYSSPALATDTFTFDVSATGKGRLDAASPTSLALTIPGGSAFTLDLSTMTQVAAEFQFK 285 Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 +D S + + + L +V V + S I Sbjct: 286 ATVDGNSPSAIEKVEVDGDGTMYAIYNDGTRLATYRIPLATVPSPDKLVPEVGNVYSVGI 345 Query: 182 PPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 ++ TVK LE SN + E+ MI + + + + + + Sbjct: 346 DSGNVQVDFAGNSGLGTVKAKALEQSNVDLASELTAMIESQRGYTANSKVFQTGADLLDV 405 Query: 237 AIR 239 + Sbjct: 406 LVN 408 >gi|291558205|emb|CBL35322.1| fagellar hook-basal body proteins [Eubacterium siraeum V10Sc8a] Length = 503 Score = 84.1 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 23/143 (16%), Positives = 47/143 (32%), Gaps = 10/143 (6%) Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-----IATMGLY 161 +V G + D Q + + + E G I V + + + Sbjct: 358 SNNFFSDMVQLLGNIKMTDGRVAATQTVKDLDSVYINEDGTIYGVHSVHGIIMLGRIDIV 417 Query: 162 SVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + D G + +S + + + +V G LE SN + E MI Sbjct: 418 TFDNPNGLEQVGSSYWRETLSSGQPQVNIAGENGSASVVSGALEMSNVDLSQEFSDMIIT 477 Query: 217 TQKFNSITTLIDENEKSMLEAIR 239 + F + + +I ++ + E + Sbjct: 478 QRGFQANSRIITTSDTMLEEIVN 500 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 28/119 (23%), Positives = 46/119 (38%), Gaps = 13/119 (10%) Query: 19 LSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI------------DQKISFVASGKEYL 66 + + +N++N +T GF+T F EV K + Q G Sbjct: 1 MDVIGNNIANVNTTGFKTSVTTFQEVYYQTKKNGSAGSNLQGGVNPSQVGYGTKLGAIGQ 60 Query: 67 SKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYPVL 124 F + + D AL GD +F + I +R G F V + G+LV ++G + Sbjct: 61 VMGQSGFTYSDSVYDCALSGDGFFQVMDEAGNIFYSRAGVFNVDNAGNLVDSNGNMVLG 119 >gi|331006033|ref|ZP_08329375.1| Flagellar hook protein flgE [gamma proteobacterium IMCC1989] gi|330420162|gb|EGG94486.1| Flagellar hook protein flgE [gamma proteobacterium IMCC1989] Length = 877 Score = 84.1 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 29/153 (18%), Positives = 54/153 (35%), Gaps = 2/153 (1%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV--GAIKNDIDQKISFVASG 62 FN+ L+ A L +N++N T GF+ + +F ++ A+ + ++Q S V Sbjct: 3 FNVALSGIRAANSDLRVTGNNIANASTTGFKESRTEFGDIYSTSALGSGLNQPGSGVRVQ 62 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ T LD ++ G +F TR G F + +G +V+ + Sbjct: 63 DIAQQFGQGNISFTENSLDLSISGSGFFVTSFAGDQSFTRAGTFGLDQEGFIVNNTDARL 122 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI 155 A I + + Sbjct: 123 QGFDADSSGNISGLIGDIQIQTTNIQPTATTGV 155 Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 33/98 (33%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLED 201 + + +V+A + L QG ++ T ++ G LED Sbjct: 778 YTNGENQVLAQVALADFANVQGLQSDGDTAWVQTFESGEPIIGGPGTASLGLIQSGALED 837 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + ++ +I + F + I+ + I Sbjct: 838 SNVDLSEQLVNLIIAQRNFQANAKTIETADTITQTIIN 875 >gi|171321838|ref|ZP_02910739.1| flagellar basal body FlaE domain protein [Burkholderia ambifaria MEX-5] gi|171092876|gb|EDT38128.1| flagellar basal body FlaE domain protein [Burkholderia ambifaria MEX-5] Length = 413 Score = 84.1 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 31/189 (16%), Positives = 65/189 (34%), Gaps = 2/189 (1%) Query: 8 GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVASGKEY 65 GL+ L + +N++N +TVGF++ +FS++ Q A Sbjct: 6 GLSGLAGASNALDVIGNNIANANTVGFKSSTAQFSDMYANSIATSVNTQIGIGTALASVQ 65 Query: 66 LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125 G+ +T + LD A+ G+ +F + + +RDG F+ +G +V+A G + Sbjct: 66 QQFGQGTINTTNSSLDVAINGNGFFQMSNNGVTTYSRDGTFQRDKNGYIVNAQGLNLMGY 125 Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185 ++ + + IS T + + + Sbjct: 126 LSDKNGVVNTAQTVPLQAPTTNISPTATTKITGQFNLNSQDKVPTKAPFDATDTSTYNYS 185 Query: 186 LEDLSGVTV 194 ++ Sbjct: 186 TSVQVYDSL 194 Score = 68.0 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 11/98 (11%), Positives = 33/98 (33%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLED 201 + + V+ + + + + G V + + + + T++ LE+ Sbjct: 315 YSNGQTAVLGQIAIANFNNPNGLVNLGGNQYAETAASGVPQISAPGSTNHGTLQGSALEN 374 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + ++ +I + + + I + I Sbjct: 375 SNVDLTSQLVNLITAQRNYQANAQTIKTQQTVDQTLIN 412 >gi|330967090|gb|EGH67350.1| flagellar hook protein FlgE [Pseudomonas syringae pv. actinidiae str. M302091] Length = 441 Score = 84.1 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 53/134 (39%), Gaps = 4/134 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA----IKNDIDQKISFV 59 SFNIGL+ A + L +N++N T GF++ + +F++ + Sbjct: 2 SFNIGLSGLYAANKSLDVTGNNIANVATTGFKSSRAEFADQYAQSIRGTSGQTNVGSGVS 61 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119 + + T LD A+ G+ +F L + + TR G F +G +V+++G Sbjct: 62 TAAVSQQFSQGNLTTGTANSLDLAINGNGFFMLSNNGEKLYTRAGAFHTDKEGFVVNSAG 121 Query: 120 KYPVLDMASVPIQI 133 + Sbjct: 122 MKLQGYNVDANGSV 135 Score = 64.1 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 16/123 (13%), Positives = 34/123 (27%), Gaps = 5/123 (4%) Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 D + + + K +VI L + QG + + Sbjct: 317 QDQDGYATGQLSAMSVDSTGNLFATYTNGKSQVIGQTSLTNFANVQGLAQAGGTNWRETF 376 Query: 182 PPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + + ++ LE+SN + E+ +I + + I M Sbjct: 377 ASGVPVSGTPQSGTLGSITGQALEESNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQT 436 Query: 237 AIR 239 I+ Sbjct: 437 TIQ 439 >gi|319944135|ref|ZP_08018413.1| flagellar hook protein FlgE [Lautropia mirabilis ATCC 51599] gi|319742629|gb|EFV95038.1| flagellar hook protein FlgE [Lautropia mirabilis ATCC 51599] Length = 417 Score = 84.1 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 32/135 (23%), Positives = 59/135 (43%), Gaps = 3/135 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F GL+ A + L T+ N++N TVGF+ + +F++V + + + Sbjct: 2 AFQQGLSGLNAAARHLDTIGHNVANASTVGFKASRAEFADVYATTVYGVSNVSPGIGTEV 61 Query: 64 --EYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGK 120 G+ +T LD + G +F + ++ I TR+G+FK+ G +V+ASGK Sbjct: 62 GAIAQQFSQGALTTTNNSLDLGINGGGFFRMSDNGGAITYTREGQFKLDKSGYIVNASGK 121 Query: 121 YPVLDMASVPIQIPQ 135 + Sbjct: 122 RLTGYPVDKNGVVTN 136 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 13/89 (14%), Positives = 29/89 (32%), Gaps = 5/89 (5%) Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEM 210 + L + QG + S T ++ G LE SN + E+ Sbjct: 327 GRVALANFTNPQGLQPLGGNQWGETADSGAPLVGSPSTGTLGVIQSGALESSNVDLTQEL 386 Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIR 239 MI + + + + +++ + + Sbjct: 387 VNMITAQRVYQANAQTVRTHDQLLQTIVN 415 >gi|254230140|ref|ZP_04923535.1| FlgE [Vibrio sp. Ex25] gi|262394939|ref|YP_003286793.1| flagellar hook protein FlgE [Vibrio sp. Ex25] gi|151937333|gb|EDN56196.1| FlgE [Vibrio sp. Ex25] gi|262338533|gb|ACY52328.1| flagellar hook protein FlgE [Vibrio sp. Ex25] Length = 437 Score = 84.1 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 30/200 (15%), Positives = 72/200 (36%), Gaps = 7/200 (3%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGK 63 + L+ A + L+T ++N++N +T GF+ + +F++V N + + Sbjct: 3 YVSLSGLSAAQLDLNTTSNNIANANTYGFKESRAEFADVYSNSLFTNAKTTPGGGAQASQ 62 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWF----ALESPRGIILTRDGRFKVTDDGSLVSASG 119 GS I T +D + G +F +P+ LTR+G F + + +V+A+ Sbjct: 63 VAQQFHEGSSIYTNNPMDLRVSGTGFFAVAKERLTPQQNELTRNGAFHLNKENYMVTAND 122 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV-RRENSGIS 178 ++ + E + E + + ++ + + Sbjct: 123 EFLLGYQVDPSSGEVSSYEPQPINIPAEFGKPKQTANIEVGVNLPANGDLKDPTQFDFSD 182 Query: 179 PNIPPTPLEDLSGVTVKRGF 198 P+ ++ + + Sbjct: 183 PDTYNRSTSSTIYDSMGQSY 202 Score = 65.7 bits (158), Expect = 5e-09, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 34/98 (34%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI-----PPTPLEDLSGVTVKRGFLED 201 + + + + L V QG ++ + S T+ G LE Sbjct: 338 YSNGENVTLGRVALVRVPNEQGLDKKGGTQWDSTQFSGDKIWGESNKGSFGTINNGMLEQ 397 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ +I + F + + ++ + + ++ Sbjct: 398 SNIDMTQELVDLISAQRNFQANSRSLEVHNQLQQNILQ 435 >gi|239906284|ref|YP_002953024.1| flagellar hook protein FlgE [Desulfovibrio magneticus RS-1] gi|239796149|dbj|BAH75138.1| flagellar hook protein FlgE [Desulfovibrio magneticus RS-1] Length = 518 Score = 84.1 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 32/138 (23%), Positives = 61/138 (44%), Gaps = 6/138 (4%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---DIDQKISF 58 +S G++ L Q ++T +N++N +TVG+++ ++ F++++ + D Q + Sbjct: 1 MSSIWTGVSGLLTYSQGIATTGNNLANVNTVGYKSSRMLFADMISTMAGGTSDGSQIGTG 60 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALES---PRGIILTRDGRFKVTDDGSLV 115 V G L EVGS D A+ G+ + + TR G F +G+L+ Sbjct: 61 VQVGSIALQTEVGSLQDASNSTDLAITGERGYFVVKDAANDKTYYTRAGDFNFDKNGNLM 120 Query: 116 SASGKYPVLDMASVPIQI 133 SA+G + Sbjct: 121 SATGCNVQGWAVDQDAIL 138 Score = 72.2 bits (175), Expect = 6e-11, Method: Composition-based stats. Identities = 34/205 (16%), Positives = 61/205 (29%), Gaps = 10/205 (4%) Query: 40 KFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 +FS + N S + K LS GS+ S A+ +A + Sbjct: 316 EFSATFKSASNGS-ALPSQTIAFKTGLSATDGSWNSGSAANAGAIGTNAALNIGYNPSST 374 Query: 100 LTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG 159 L S S + + + I+ G+ K + + Sbjct: 375 LNAVYCTTNYATSSYTQTSSQDGYAKGEMTATNVDENGVIWGSFTNGQ----TKALYVLA 430 Query: 160 LYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMI 214 L R N+ +SP ++ LE SN + EM +I Sbjct: 431 LADFTNPTDLYRNGNNLLSPTTESGKATVGRANSGVFDSIAGNTLESSNVDMASEMVNLI 490 Query: 215 HLTQKFNSITTLIDENEKSMLEAIR 239 + F + + ++ E M A++ Sbjct: 491 INQRAFQANSKVVTTAESLMETALQ 515 >gi|85712254|ref|ZP_01043305.1| flagellar hook protein [Idiomarina baltica OS145] gi|85693881|gb|EAQ31828.1| flagellar hook protein [Idiomarina baltica OS145] Length = 466 Score = 84.1 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 40/167 (23%), Positives = 64/167 (38%), Gaps = 5/167 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61 SFNI L+ + ++ L A+N++N T GF+ + +F++V Q + A+ Sbjct: 2 SFNIALSGISSAQKDLDVTANNVANVRTTGFKGSRAEFADVFANNIFSGSDQQTGNGSAT 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI---ILTRDGRFKVTDDGSLVSAS 118 G+ T LD A+ G+ +FA S TR G FK+ DD +V+ Sbjct: 62 ASVAQQFSQGTLNFTQNSLDMAISGNGFFATTSGIAQQDFTYTRAGAFKLNDDSYIVNNQ 121 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 G++ Q + G G AT Y Sbjct: 122 GRFLHGFPVDSASGATQSTSLAASGPIRIPDSAGAPSATENQYQSFN 168 Score = 62.6 bits (150), Expect = 5e-08, Method: Composition-based stats. Identities = 15/125 (12%), Positives = 38/125 (30%), Gaps = 5/125 (4%) Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 D +V + + + + + L QG + ++ S Sbjct: 340 NLLEQDGTTVGRLTNIDIAEDGLISASYSNGDVQYLGKVALVRFANEQGLTQLGDASWSE 399 Query: 180 NIPPTPLEDLS-----GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 + T++ LE+SN + E+ +I + F + + ++ N Sbjct: 400 SQSSGIATSGEANSGVFGTIEASALENSNVDLTKELVDLISAQRNFQANSRSLEINNSLQ 459 Query: 235 LEAIR 239 ++ Sbjct: 460 QNILQ 464 >gi|255022066|ref|ZP_05294072.1| Flagellar hook protein flgE [Acidithiobacillus caldus ATCC 51756] gi|254968552|gb|EET26108.1| Flagellar hook protein flgE [Acidithiobacillus caldus ATCC 51756] Length = 416 Score = 84.1 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 35/172 (20%), Positives = 70/172 (40%), Gaps = 9/172 (5%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV----GAIKNDIDQKISFV 59 +N ++ A + L+T+ +N++N +TVGF+ +F ++ V Sbjct: 2 GYNTAISGLDAAQTDLNTIGNNIANVNTVGFKESNAQFGDLYAASLAGSAGASTTPGIGV 61 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSA-- 117 ++ + G+ +TG LD A+ G +F + + + TR+G+F V+ +G L + Sbjct: 62 STVDLSQNFTQGNIQTTGNPLDMAINGPGFFIVNNNGTMDYTRNGQFHVSSNGVLENNGD 121 Query: 118 ---SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 G PV I I + + + ++A + V S Sbjct: 122 LPVQGFQPVPGSNGRFSTILSNLTISESAMPPQATSQAALVANLNANDVPPS 173 Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 23/138 (16%), Positives = 45/138 (32%), Gaps = 9/138 (6%) Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 +T+ V++ I + EI G+ K I + L + Sbjct: 282 TLTNSPFAVTSENVNGYAPGTYSSISVQSTGEIDANYTNGQK----KAIGKVALANFANL 337 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFN 221 QG + S S T ++ G +E SN + ++ MI Q + Sbjct: 338 QGLAPISGNLWSATATAGNPLVNSPGTAGLGVIQSGAVESSNVSLSSQLVDMIVAQQAYQ 397 Query: 222 SITTLIDENEKSMLEAIR 239 + T+ I ++ ++ Sbjct: 398 ANTSTIKTEQQDTQSLLQ 415 >gi|291524892|emb|CBK90479.1| fagellar hook-basal body proteins [Eubacterium rectale DSM 17629] Length = 477 Score = 83.8 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 28/145 (19%), Positives = 50/145 (34%), Gaps = 18/145 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M S ++ + R+ + +N++N +T F+ V+FSE++ + Sbjct: 1 MMRSLYSAVSGLKTHQTRMDVIGNNIANVNTEAFKASSVRFSEIMYQTTSGTSAGNGAAG 60 Query: 61 SG---------------KEYLSKEVGSFISTGTELDFALEGD---AWFALESPRGIILTR 102 +G GS +TG D L +F + + TR Sbjct: 61 TGGKNAKQIGLGVKSGATAVNITGAGSAETTGNPFDLRLNDKNATNFFVVSDGTNRLFTR 120 Query: 103 DGRFKVTDDGSLVSASGKYPVLDMA 127 G F V +G L +S Y + Sbjct: 121 AGDFYVDGNGYLCMSSTGYTLQGWQ 145 Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 22/209 (10%), Positives = 60/209 (28%), Gaps = 12/209 (5%) Query: 38 KVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG 97 + F + S ++ + +S D ++ G + S Sbjct: 271 QTIFEDASLVFDQSEGTFTSISSANSPAAKT-INLNLSVLNTQDASINGSNF----SNIE 325 Query: 98 IILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA- 156 + ++ + ++ +G + + G V+ Sbjct: 326 VDFSKSMNYNNNGTSTIGGMNGDLQGDGKGKALGALTGITVSDDGKIYGSYDNGNTVLLC 385 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLE------DLSGVTVKRGFLEDSNANSMYEM 210 + + + G + ++ + + G ++ G LE SN + + Sbjct: 386 QIAVAQFANASGLEKIGDNCYQSTLNSGEFDGIGVEISADGGSISSGELEMSNVDLSSQF 445 Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIR 239 MI + F + + +I ++ + E I Sbjct: 446 TDMIVTQRGFQANSRVITTSDTLLEELIN 474 >gi|289679029|ref|ZP_06499919.1| flagellar hook protein FlgE [Pseudomonas syringae pv. syringae FF5] Length = 279 Score = 83.8 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 53/134 (39%), Gaps = 4/134 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA----IKNDIDQKISFV 59 SFNIGL+ A + L +N++N T GF++ + +F++ + + Sbjct: 2 SFNIGLSGLYAANKSLDVTGNNIANVATTGFKSSRAEFADQYAQSIRGTSGNTNVGSGVR 61 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119 + + T LD A+ GD +F + + + TR G F +G +V++S Sbjct: 62 TAAVSQQFSQGSLTTGTANSLDLAINGDGFFMMSNNGEKLYTRAGAFHTDKEGYVVNSSN 121 Query: 120 KYPVLDMASVPIQI 133 + Sbjct: 122 MKLQGYNVDANGSV 135 >gi|325529014|gb|EGD06027.1| flagellar hook protein FlgE [Burkholderia sp. TJI49] Length = 413 Score = 83.8 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 30/135 (22%), Positives = 56/135 (41%), Gaps = 2/135 (1%) Query: 8 GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVASGKEY 65 GL+ L + +N++N +TVGF++ +FS++ Q Sbjct: 6 GLSGLAGASNALDVIGNNIANANTVGFKSSTAQFSDMYANSIATSVNTQIGIGTTLASVQ 65 Query: 66 LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125 G+ +T + LD A+ G+ +F + + + TRDG F+ +G +V+A G + Sbjct: 66 QQFGQGAINATSSSLDVAINGNGFFQMSNNGAMTYTRDGTFQRDKNGYIVNAQGLNLMGY 125 Query: 126 MASVPIQIPQKDEIF 140 A I + Sbjct: 126 AADKNGVINTAQTVP 140 Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 11/98 (11%), Positives = 31/98 (31%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLED 201 + + + + L + + G V + + + T++ LE+ Sbjct: 315 YSNGQTATLGQIALANFNNPNGLVNIGGNQYVETAASGVPQISAPGSTNHGTLQGSALEN 374 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + ++ +I + + + I + I Sbjct: 375 SNVDLTSQLVNLITAQRNYQANAQTIKTQQTVDQTLIN 412 >gi|292670487|ref|ZP_06603913.1| flagellar basal body and hook protein [Selenomonas noxia ATCC 43541] gi|292647897|gb|EFF65869.1| flagellar basal body and hook protein [Selenomonas noxia ATCC 43541] Length = 506 Score = 83.8 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 32/163 (19%), Positives = 59/163 (36%), Gaps = 14/163 (8%) Query: 19 LSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------------QKISFVASGKEYL 66 + + +N++N +T GF+ +V F +++ + Q V+ G Sbjct: 1 MDVIGNNIANVNTTGFKAGRVTFEDMLSQTLSGAASPGTTIGGTNPKQVGLGVSVGGIDT 60 Query: 67 SKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDM 126 GS STG D AL G+A F ++ TR+G F+ G+ V S V Sbjct: 61 IFSDGSVQSTGKNTDLALTGNALFVVKRGDQTYYTRNGAFEFDAKGNYVLPSSGLHVQGW 120 Query: 127 ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169 + + + G+++ +V S+ Sbjct: 121 MNKTT--NNSKVSTEGAAENIVIDAGRIMGPEQTDTVSYSENL 161 Score = 73.4 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 30/90 (33%), Gaps = 6/90 (6%) Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPT------PLEDLSGVTVKRGFLEDSNANSMYE 209 A +G+ G + S + + +G + LE SN + + Sbjct: 414 AQIGVAKFSNPSGLTKIGGSLYQESNNSNSKVVRAQTVESTGAKITPSALEMSNVDIADQ 473 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 MI + F S + +I ++ + I Sbjct: 474 FSDMIITQRGFQSNSKVITVGDEMLETLIN 503 >gi|302382558|ref|YP_003818381.1| fagellar hook-basal body protein [Brevundimonas subvibrioides ATCC 15264] gi|302193186|gb|ADL00758.1| fagellar hook-basal body protein [Brevundimonas subvibrioides ATCC 15264] Length = 478 Score = 83.8 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 36/204 (17%), Positives = 68/204 (33%), Gaps = 7/204 (3%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 ++ G++ A L+ ++ N++N +TVG++ +FS VV + V + Sbjct: 4 NSALLAGVSGLTANSAALAAISQNIANVNTVGYKRTAAEFSTVVNSQSQGAGYSAGGVLA 63 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALES-------PRGIILTRDGRFKVTDDGSL 114 + G T + D + G +F + TR G F+V + G L Sbjct: 64 NTRNYIAQGGQLQRTTSSTDLGIAGQGFFVTTEKAEGLDAGDARLFTRAGAFRVDNFGYL 123 Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174 + +G Y + IP + G V+ + + + Sbjct: 124 KNTAGLYLQGWPVNAEGDIPTDPSDLGKLTSINVGSVGGTAEATTRAQVNANLKSSQAVS 183 Query: 175 SGISPNIPPTPLEDLSGVTVKRGF 198 + I+ T T GF Sbjct: 184 ADIATYSTATKSMSTYNATTGTGF 207 Score = 60.7 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 16/123 (13%), Positives = 40/123 (32%), Gaps = 1/123 (0%) Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + +++++ I + + S+ + G R + G Sbjct: 354 VTNGTAFGNLSNIEIDEEGYVTAIFDNGVTRRIAQVALATFTSADSLTPASGNAYRVSQG 413 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 TP +G+ LE S + E +I + +++ + +I ++ + E Sbjct: 414 SGTFNLKTPGAGGAGLIGAS-QLEASTVDLSAEFTGLITTQRAYSASSKIITTADEMLAE 472 Query: 237 AIR 239 I Sbjct: 473 LIS 475 >gi|148976394|ref|ZP_01813100.1| flagellar hook protein E [Vibrionales bacterium SWAT-3] gi|145964217|gb|EDK29473.1| flagellar hook protein E [Vibrionales bacterium SWAT-3] Length = 434 Score = 83.8 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 30/207 (14%), Positives = 67/207 (32%), Gaps = 13/207 (6%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGK 63 + L+ A + L+T ++N++N +T GF+ + +F +V N + + Sbjct: 3 YVALSGLSAAQLDLNTTSNNIANANTFGFKESRAEFGDVYSNSLFTNAKTTSGGGAQASQ 62 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWF----ALESPRGIILTRDGRFKVTDDGSLVSASG 119 GS I T +D + G +F P LTR+G F + D +V+A+ Sbjct: 63 VAQQFHEGSSIYTNNPMDLRVSGTGFFAVAKDRMVPEINELTRNGAFHLNKDNYMVTAND 122 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF-------VRR 172 ++ + + E + + ++ + + Sbjct: 123 EFLLGYDVDPNSGEVLSYAPKPLDIPAEFGKPKQTENIEVGVNLPANGDLKDPAAFNFKD 182 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFL 199 ++ + +L Sbjct: 183 ADTYNRATSSTVYDSMGQSYKLTTYYL 209 Score = 68.0 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 19/145 (13%), Positives = 48/145 (33%), Gaps = 6/145 (4%) Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ-KGKVIATMG 159 T+ +F + + + + + + D G S + ++ +G Sbjct: 288 TQVLKFGLDSSTQFAAPFELTKFDEDGATTGFLTKIDFDEYGSVLGTYSNGENVMLGRVG 347 Query: 160 LYSVDMSQGFVRRENSGISPNIP-----PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMI 214 L V QG ++ + S ++ G LE SN + E+ +I Sbjct: 348 LVRVPNEQGLDKKGGTQWDSTNDSGDKIWGESNKGSFGSINNGSLEQSNIDMTQELVDLI 407 Query: 215 HLTQKFNSITTLIDENEKSMLEAIR 239 + F + + ++ + + ++ Sbjct: 408 SAQRNFQANSRSLEVHNQLQQNILQ 432 >gi|119899027|ref|YP_934240.1| FlgE protein [Azoarcus sp. BH72] gi|119671440|emb|CAL95353.1| FlgE protein [Azoarcus sp. BH72] Length = 445 Score = 83.8 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 30/125 (24%), Positives = 58/125 (46%), Gaps = 4/125 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID---QKISFVA 60 +F GL+ + + L +++N++N TVGF+ F+++ + Q Sbjct: 2 AFQQGLSGLNSSSKALDVISNNVANASTVGFKASNTIFADMYASAMTGGTSSLQVGIGSK 61 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119 S G+ +T LD A+ G+ +F S I +R+G+F V +G++V+A+G Sbjct: 62 VAAVTQSFTQGNLTATNNPLDMAINGNGFFRLSRSDGSIAYSRNGQFDVDRNGNIVNATG 121 Query: 120 KYPVL 124 + Sbjct: 122 EKLTG 126 Score = 73.4 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 25/170 (14%), Positives = 53/170 (31%), Gaps = 11/170 (6%) Query: 81 DFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY------PVLDMASVPIQIP 134 D + G+ F + + T T D S + P D + Sbjct: 274 DSTIAGNGVFNVTRTGAQLGTGADDLNFTLDLSRSTQWNTDSGVTTSPRQDGYTTGRLTG 333 Query: 135 QKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT- 193 V + + + + IA + L + QG ++ + + + T Sbjct: 334 LSVSNTGVVQGTFSNGQVRDIARLALANFSSPQGLTSLGDNLWAESFESGQPTVGAPGTG 393 Query: 194 ----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 V G +E+SN + E+ MI + + + I ++ + + Sbjct: 394 VLGSVTAGQIEESNVDLTQELVSMIVQQRNYQANAQSIRTQDQILQTLVN 443 >gi|294635610|ref|ZP_06714087.1| flagellar hook protein FlgE [Edwardsiella tarda ATCC 23685] gi|291091062|gb|EFE23623.1| flagellar hook protein FlgE [Edwardsiella tarda ATCC 23685] Length = 411 Score = 83.8 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 34/166 (20%), Positives = 63/166 (37%), Gaps = 6/166 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 F+ ++ A +L + +N++N+ TVGF++ V F+++ + V Sbjct: 2 GFSQAISGMNAASSQLDVIGNNIANSQTVGFKSGSVTFADMFA-----GSKVGLGVTVAS 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122 + G+ +T LD A+ G +F ++ P + TR+G+F G L +A G Y Sbjct: 57 VNQDFKDGTTTTTNRGLDVAISGQGFFRMQDPNGSVYYTRNGQFSKDAKGFLTNAQGMYL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 AS Q+ + K + S Sbjct: 117 TGYPASGTPPTIQQGADPVPIQIPTGLMPAKSTTQGSMVLNLNSAN 162 Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 15/122 (12%), Positives = 39/122 (31%), Gaps = 5/122 (4%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 D + +Q+ +++ + + + +G V N+ S + Sbjct: 288 TQDGYKAGELTGYQINDDGTITGSYTNQQKQLLGQIVMANFAAPEGLVSEGNNVWSESAK 347 Query: 183 PTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + T + G +E SN + ++ MI + + S I ++ + Sbjct: 348 SGQPIVGTSGTSGLGNLTSGAVEASNVDLSKQLVDMIVAQRNYQSNAQTIKTQDQILQTL 407 Query: 238 IR 239 + Sbjct: 408 VN 409 >gi|209547530|ref|YP_002279448.1| flagellar hook protein FlgE [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538774|gb|ACI58708.1| protein of unknown function DUF1078 domain protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 430 Score = 83.8 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 39/163 (23%), Positives = 69/163 (42%), Gaps = 2/163 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 S ++ A RLSTV+DN++N +TVG++ + FS +V + + V + Sbjct: 6 SMKTAVSGMSAQANRLSTVSDNIANANTVGYKAVSTSFSSLVLPSSSG-NYNSGGVQTSV 64 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGKYP 122 + G T ++ D A+ GD +F ++S G +LTR G F V DG+LV+ +G Sbjct: 65 RQAISQQGDISYTTSDYDLAISGDGFFIVQSADGTPVLTRAGDFSVDSDGNLVNGAGFTL 124 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 + + + + +A+ Y Sbjct: 125 MGYSYDSGVPAVVVNGFDGLVPVNVSQSGLSAVASTSAYFSGN 167 Score = 71.8 bits (174), Expect = 7e-11, Method: Composition-based stats. Identities = 13/73 (17%), Positives = 27/73 (36%), Gaps = 1/73 (1%) Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 G V N + P + +++ G LE SN + E+ +MI + + + + + Sbjct: 356 SGNVYSANGQSGVTVTGFPQTNG-LGSIQSGALESSNVDLAGELTEMIEAQRSYTANSKV 414 Query: 227 IDENEKSMLEAIR 239 M + Sbjct: 415 FQTGSDIMDVLVN 427 >gi|291529033|emb|CBK94619.1| fagellar hook-basal body proteins [Eubacterium rectale M104/1] Length = 477 Score = 83.8 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 28/145 (19%), Positives = 50/145 (34%), Gaps = 18/145 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M S ++ + R+ + +N++N +T F+ V+FSE++ + Sbjct: 1 MMRSLYSAVSGLKTHQTRMDVIGNNIANVNTEAFKASSVRFSEIMYQTASGASAGNGATG 60 Query: 61 SG---------------KEYLSKEVGSFISTGTELDFALEGD---AWFALESPRGIILTR 102 +G GS +TG D L +F + + TR Sbjct: 61 TGGKNAKQIGLGVKSGATAVNITGAGSAETTGNPFDLRLNDKNATNFFVVSDGTNRLFTR 120 Query: 103 DGRFKVTDDGSLVSASGKYPVLDMA 127 G F V +G L +S Y + Sbjct: 121 AGDFYVDGNGYLCMSSTGYTLQGWQ 145 Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 22/209 (10%), Positives = 61/209 (29%), Gaps = 12/209 (5%) Query: 38 KVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG 97 + F + S ++ + +S D ++ G + S Sbjct: 271 QTIFEDASLVFDQSEGTFTSISSANSPAAKT-INLNLSVLNTQDASINGSNF----SNIE 325 Query: 98 IILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA- 156 + ++ + ++ +G + + G V+ Sbjct: 326 VDFSKSMNYNNNGTSTIGGMNGNLQGDGKGKALGALTGITVSDDGKIYGSYDNGNTVLLC 385 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLE------DLSGVTVKRGFLEDSNANSMYEM 210 + + + G + ++ + + + G ++ G LE SN + + Sbjct: 386 QIAVAQFANASGLEKIGDNCYQSTLNSSEFDGIGVEISADGGSISSGELEMSNVDLSSQF 445 Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIR 239 MI + F + + +I ++ + E I Sbjct: 446 TDMIVTQRGFQANSRVITTSDTLLEELIN 474 >gi|121601827|ref|YP_989383.1| flagellar hook protein FlgE [Bartonella bacilliformis KC583] gi|120614004|gb|ABM44605.1| flagellar hook protein FlgE [Bartonella bacilliformis KC583] Length = 404 Score = 83.8 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 36/126 (28%), Positives = 56/126 (44%), Gaps = 2/126 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + ++ A +RLS +A+N++N TVG++ V+FS V D V S Sbjct: 6 MMHTSVSGMNAQGKRLSGIAENVANAGTVGYKRTNVQFSNYVTP-SGDYAYVPGGVKSHV 64 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122 + G +TG D + G+ +F +E LTR G F DG L ++SG Y Sbjct: 65 GHDISIYGPARATGRPGDAMINGNGFFRVEDENGNEFLTRAGSFSRDKDGYLRNSSGHYL 124 Query: 123 VLDMAS 128 + D Sbjct: 125 LNDEGQ 130 Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 36/98 (36%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLED 201 +QK +VI+ +GL +V + + N ++ G+LED Sbjct: 304 YTNQKTRVISYVGLATVTSPESLTVLSGTVFQTNTRTGAQMVGRPGDGVFGSLTAGYLED 363 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN E+ MI + + + + + + M + Sbjct: 364 SNVEMSEELTDMIESQRNYTANSKVFQTGSELMDVIVN 401 >gi|315636309|ref|ZP_07891559.1| flagellar hook protein FlgE [Arcobacter butzleri JV22] gi|315479398|gb|EFU70081.1| flagellar hook protein FlgE [Arcobacter butzleri JV22] Length = 583 Score = 83.8 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 30/125 (24%), Positives = 58/125 (46%), Gaps = 5/125 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M ++ G++ ++ +S ++N++N+ T G + ++ F++++ V+ Sbjct: 1 MISALWNGVSGISNYDKGISVESNNIANSSTTGHKLDEITFADMLYTNGG----YGKGVS 56 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASG 119 + GS STG LD A++G +F + + I TR G FK T DG L + G Sbjct: 57 TQSISKQFAQGSINSTGATLDMAIDGKGFFIVSDKAGEIYYTRAGDFKQTKDGWLQTQDG 116 Query: 120 KYPVL 124 + Sbjct: 117 MNVLG 121 Score = 63.0 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 34/241 (14%), Positives = 74/241 (30%), Gaps = 11/241 (4%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRT---IKVKFSEVVGAIKNDIDQKISF 58 QTS+N A A + +++ T G+ V E + A K+ Sbjct: 346 QTSYNTAKNAISAYKDLADKISN------TAGYSASVKDGVLTVESLIAGKSFNITDAKL 399 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSAS 118 +G + S +D A + A+E G L + + GS ++ Sbjct: 400 NDTGVNATVSQEAVAGSGMAMVDSA-KDALKQAVEKAGGKFLEITNVMEYANLGSYGTSD 458 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS-GI 177 + + V + + ++ + + QG ++ Sbjct: 459 LNLRLDTLGLVEGDFGEASVSDDGFVFVTSGDNKFLVGRVSTAAFRNEQGLEAVGDNKYS 518 Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + T +K LE SN + + ++ + + + + I ++ + A Sbjct: 519 ATKSSGTAYNADGMNKIKEKSLERSNVSYSSTLTSLMVYQRAYEASSKSITTSDDFLKTA 578 Query: 238 I 238 I Sbjct: 579 I 579 >gi|254508422|ref|ZP_05120542.1| flagellar hook protein [Vibrio parahaemolyticus 16] gi|219548632|gb|EED25637.1| flagellar hook protein [Vibrio parahaemolyticus 16] Length = 438 Score = 83.8 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 30/132 (22%), Positives = 57/132 (43%), Gaps = 6/132 (4%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGK 63 + L+ A + L+T ++N++N +T GF+ + +F +V N V + K Sbjct: 3 YVALSGISAAQLDLNTTSNNIANANTFGFKESRAEFGDVYSNSLFTNAKTTPGGGVQAQK 62 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWF----ALESPRGIILTRDGRFKVTDDGSLVSASG 119 GS + T +D + G +F +P LTR+G F + D +V+A+ Sbjct: 63 VAQQFHEGSSVYTNNPMDLRISGTGFFAVAKDRLTPTTNELTRNGAFHLNKDNYMVTAND 122 Query: 120 KYPVLDMASVPI 131 +Y + + Sbjct: 123 EYLLGYQVNGDT 134 Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 12/98 (12%), Positives = 35/98 (35%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI-----PPTPLEDLSGVTVKRGFLED 201 + + + + + V QG ++ + S ++ G LE Sbjct: 339 YSNGENITLGRVAMVRVANEQGLDKKGGTQWDSTQFSGDKIWGESNKGSFGSINSGTLEQ 398 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ +I + F + + ++ + ++ ++ Sbjct: 399 SNIDMTQELVDLITAQRNFQANSRSLEVHNQTQQNILQ 436 >gi|152980177|ref|YP_001353111.1| flagellar hook protein FlgE [Janthinobacterium sp. Marseille] gi|151280254|gb|ABR88664.1| FlgE flagellar hook protein [Janthinobacterium sp. Marseille] Length = 416 Score = 83.8 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 2/134 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID--QKISFVAS 61 SF GL+ A + L + +N++N+ TVGF+ +V+F+++ + + Q V Sbjct: 2 SFQQGLSGLNAASKSLEAIGNNVANSGTVGFKQSQVQFADIYASTLSGSGAAQIGIGVQV 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 + G+ + LD A+ GD +F + S I R+G+F++T +G + +ASG Sbjct: 62 ARVAQLFSQGNIAVSNNPLDMAINGDGFFRMSSGGSITYGRNGQFELTKEGYIQNASGAR 121 Query: 122 PVLDMASVPIQIPQ 135 MA + Sbjct: 122 LTGYMADANGVVQN 135 Score = 75.7 bits (184), Expect = 6e-12, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 39/129 (30%), Gaps = 6/129 (4%) Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG-KVIATMGLYSVDMSQGFVRRENS 175 A G L P + D + G S V+ + L S G ++ Sbjct: 286 AFGVSKNLPDGYRPGTLTGFDVASDGSIMGRYSNGEVNVLGQVILSSFANPNGLQNIGDN 345 Query: 176 GISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + + V+ +E+SN + E+ MI + + + I Sbjct: 346 QWVETAESGVPLTSTPGSSGLGVVQSARIEESNVDLTAELVNMITAQRVYQANAQTIKTQ 405 Query: 231 EKSMLEAIR 239 ++ M + Sbjct: 406 DQIMQTLVN 414 >gi|255021354|ref|ZP_05293402.1| Flagellar hook protein flgE [Acidithiobacillus caldus ATCC 51756] gi|254969217|gb|EET26731.1| Flagellar hook protein flgE [Acidithiobacillus caldus ATCC 51756] Length = 419 Score = 83.8 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 4/120 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI----DQKISFV 59 +F+ L+ A L + +N+SN +TVGF++ +F++ GA Q Sbjct: 3 AFSTALSGLQAANTDLQVLGNNISNANTVGFKSSNAEFADAYGAALVGSAPTYGQVGIGT 62 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119 G+ +T LD A+ G+ +F L I+ +R+G+F++ G +V +G Sbjct: 63 RVMTVAQQFTQGNIQTTNNPLDVAINGNGFFQLNYNGDIVYSRNGQFQLNSGGVIVDGNG 122 Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 18/128 (14%), Positives = 41/128 (32%), Gaps = 1/128 (0%) Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172 + V ++ + I I+ G+ G++ T + + Sbjct: 291 NAVVSATTNGYGVGQLTGLSIDPGGNIYARYSNGQSQVLGQIALTRFANNNGLQNLGNNY 350 Query: 173 ENSGISPNIPPTPLEDLSGVTVKR-GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 S S +P + + + V + G +E SN N ++ +I Q + + I Sbjct: 351 WASSYSSGLPLSGAPGSTNLGVLQSGAVEQSNVNLSQDLVNLIVAQQAYQANAQTIKTQN 410 Query: 232 KSMLEAIR 239 + + Sbjct: 411 TVVQTLLS 418 >gi|157376216|ref|YP_001474816.1| flagellar hook protein FlgE [Shewanella sediminis HAW-EB3] gi|157318590|gb|ABV37688.1| flagellar basal body FlaE domain protein [Shewanella sediminis HAW-EB3] Length = 454 Score = 83.8 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 36/183 (19%), Positives = 69/183 (37%), Gaps = 5/183 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61 SFNI L+ A ++ L+T A+N++N +++GF+ + +F++V N + Sbjct: 2 SFNIALSGIAAAQKDLNTTANNIANVNSIGFKESRAEFADVYANSIFANSKTGVGGGATT 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESP---RGIILTRDGRFKVTDDGSLVSAS 118 GS T LD A+ G +F S + + TR G FKV + LV + Sbjct: 62 SHVAQQFHQGSLQFTNNALDMAINGGGFFVTSSGFSSQDLSYTRAGAFKVDSNSYLVDSQ 121 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178 G + + + ++++ G ++ + Sbjct: 122 GNFLQAFEVDKDGNSTSVSLTETKPVRIPDTAGSPKKTENVGIQMNLNAGDGTKDPALFD 181 Query: 179 PNI 181 P+ Sbjct: 182 PSD 184 Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 13/90 (14%), Positives = 33/90 (36%), Gaps = 5/90 (5%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYE 209 +A + L QG + N+ ++ + +++ LE SN + E Sbjct: 363 LARVALARFANEQGLTQVGNTSWKASLDSGAALAGEANSGTFGSIRSSALEQSNVDLTTE 422 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + +I + F + + ++ N ++ Sbjct: 423 LVDLISAQRNFQANSRTLEVNNTLQQTVLQ 452 >gi|206603146|gb|EDZ39626.1| Probable flagellar hook protein FlgE [Leptospirillum sp. Group II '5-way CG'] Length = 457 Score = 83.8 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 65/177 (36%), Gaps = 8/177 (4%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND------IDQK 55 +S + + A+ +S + +N++N +TVGF+ + F+ V G Q Sbjct: 4 LSSMYVATSGLNAMGTDMSVIGNNITNLNTVGFKQGRAVFANVYGQTMTGRSNTVNTSQP 63 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSL 114 S V GS ++ LD A++G+ + + S G TR+G + G + Sbjct: 64 GSGVYVDAIQQEFTQGSVQASTNALDLAIQGNGFLTVRSKDGQKFYTRNGELALDKTGRI 123 Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171 V S + + +I V + + + + + M++ Sbjct: 124 VDTS-NRALQGYMNKNGKIQPILSDIRVPQTTVPPKATQNVFSRINLDAGMTEKLKE 179 Score = 60.3 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 13/96 (13%), Positives = 30/96 (31%), Gaps = 5/96 (5%) Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANS 206 KV+ + + S + G + +I + LE S + Sbjct: 362 QKVLGVVSIASFNNPGGLASVGGNAYIESIASGVPNFGRPGQGGRGALLSNSLELSTTDL 421 Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 +M MI + + + ++I + + + I Sbjct: 422 GRQMVDMITAERGYQASASIIATDNTILNTLLTRIG 457 >gi|15887919|ref|NP_353600.1| flagellar hook protein FlgE [Agrobacterium tumefaciens str. C58] gi|15155515|gb|AAK86385.1| flagellar hook protein [Agrobacterium tumefaciens str. C58] Length = 425 Score = 83.4 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 37/191 (19%), Positives = 69/191 (36%), Gaps = 3/191 (1%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 G++ A +L TV DN++N T G++ FS +V + V S Sbjct: 7 MRTGVSGMNAQANKLGTVGDNIANASTTGYKRASTSFSSLVLPSSS-GSYASGGVQSNVR 65 Query: 65 YLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASGKYPV 123 Y E G+ T + D A++G+ +F ++ G TR G F+ +G L +A+G + Sbjct: 66 YSISEQGNLSYTTSSTDLAIQGNGFFVVQDGSGTPYLTRAGSFQKNSEGYLENAAGFQLM 125 Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183 F E ++ G + S + + + P+ Sbjct: 126 GYPYGSNPP-AAVVNGFTGLEAINVNNFGLTASPSTQGSFPANLNRDDKAATAPLPSGNS 184 Query: 184 TPLEDLSGVTV 194 + ++ Sbjct: 185 ATAAFGNKTSL 195 Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 17/125 (13%), Positives = 37/125 (29%), Gaps = 5/125 (4%) Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 VL+ + + + I + L +V + + P Sbjct: 298 GTAVLNGNGPSQIKDVEIGKDGLVTAVYQDGGRRNIYQLALATVPSVDNLTPQNGNVYLP 357 Query: 180 NIPPTP-----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 + + S +++G LE SN + E+ MI + + + + + M Sbjct: 358 SNDSGVVTIGFPQSGSFGYIQKGALEGSNVDIASELTDMIESQRIYTANSKVFQTGSDLM 417 Query: 235 LEAIR 239 I Sbjct: 418 DVLIN 422 >gi|291532057|emb|CBK97642.1| fagellar hook-basal body proteins [Eubacterium siraeum 70/3] Length = 503 Score = 83.4 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 23/143 (16%), Positives = 47/143 (32%), Gaps = 10/143 (6%) Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-----IATMGLY 161 +V G + D Q + + + E G I V + + + Sbjct: 358 SNNFYSDMVELLGNIKMTDGRVAATQTVKDLDSVYINEDGTIYGIHSVHGIIMLGRIDIV 417 Query: 162 SVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + D G + +S + + + +V G LE SN + E MI Sbjct: 418 TFDNPNGLEQVGSSYWRETLSSGQPQVNIAGENGSASVVSGALEMSNVDLSQEFSDMIIT 477 Query: 217 TQKFNSITTLIDENEKSMLEAIR 239 + F + + +I ++ + E + Sbjct: 478 QRGFQANSRIITTSDTMLEEIVN 500 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 28/119 (23%), Positives = 46/119 (38%), Gaps = 13/119 (10%) Query: 19 LSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI------------DQKISFVASGKEYL 66 + + +N++N +T GF+T F EV K + Q G Sbjct: 1 MDVIGNNIANVNTTGFKTSVTTFQEVYYQTKKNGSAGSNLQGGVNPSQVGYGTKLGAIGQ 60 Query: 67 SKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYPVL 124 F + + D AL GD +F + I +R G F V + G+LV ++G + Sbjct: 61 VMGQSGFTYSDSVYDCALSGDGFFQVMDEAGNIFYSRAGVFNVDNAGNLVDSNGNMVLG 119 >gi|107023953|ref|YP_622280.1| flagellar hook protein FlgE [Burkholderia cenocepacia AU 1054] gi|116691040|ref|YP_836663.1| flagellar hook protein FlgE [Burkholderia cenocepacia HI2424] gi|105894142|gb|ABF77307.1| flagellar basal body FlaE [Burkholderia cenocepacia AU 1054] gi|116649129|gb|ABK09770.1| flagellar basal body FlaE domain protein [Burkholderia cenocepacia HI2424] Length = 413 Score = 83.4 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 30/189 (15%), Positives = 63/189 (33%), Gaps = 2/189 (1%) Query: 8 GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVASGKEY 65 GL+ L + +N++N +TVGF++ +F+++ Q Sbjct: 6 GLSGLSGASNALDVIGNNIANANTVGFKSSTAQFADMYANSVATSVNTQIGIGTTLNSVQ 65 Query: 66 LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125 G+ +T + LD A+ G+ +F + + +RDG F+ +G +V+A G + Sbjct: 66 QQFGQGTINTTNSSLDVAINGNGFFQMSNNGVTTYSRDGTFQRDKNGYIVNAQGMNLMGY 125 Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185 MA + + I+ T + + Sbjct: 126 MADKNGVLNTAQTVPLQAPTTNIAPTATTKITGQFNLNSQDTVPAKTPFNATDTTTYNYS 185 Query: 186 LEDLSGVTV 194 ++ Sbjct: 186 TSIQVYDSL 194 Score = 65.3 bits (157), Expect = 6e-09, Method: Composition-based stats. Identities = 13/125 (10%), Positives = 36/125 (28%), Gaps = 5/125 (4%) Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 D + + + V+ + L + + G V + + Sbjct: 288 NNLAQDGYASGTLTTYSIGTDGKLTGNYSNGQTAVLGQIALANFNNPNGLVNLGGNQYAE 347 Query: 180 NIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 + + + T++ LE+SN + ++ +I + + + I + Sbjct: 348 SAASGVPQVSAPGSTNHGTLQGSALENSNVDLTSQLVNLITAQRNYQANAQTIKTQQTVD 407 Query: 235 LEAIR 239 I Sbjct: 408 QTLIN 412 >gi|330899401|gb|EGH30820.1| flagellar hook protein FlgE [Pseudomonas syringae pv. japonica str. M301072PT] Length = 348 Score = 83.4 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 29/134 (21%), Positives = 52/134 (38%), Gaps = 4/134 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS----FV 59 SFNIGL+ A + L +N++N T GF++ + +F++ S Sbjct: 2 SFNIGLSGLYAANKSLDVTGNNIANVATTGFKSSRAEFADQYAQSIRGTSGNTSVGSGVR 61 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119 + + T LD A+ GD +F + + + TR G F +G +V++S Sbjct: 62 TAAVSQQFSQGSLTTGTANSLDLAINGDGFFMMSNNGEKLYTRAGAFHTDKEGYVVNSSN 121 Query: 120 KYPVLDMASVPIQI 133 + Sbjct: 122 MKLQGYNVDANGSV 135 >gi|302878276|ref|YP_003846840.1| fagellar hook-basal body protein [Gallionella capsiferriformans ES-2] gi|302581065|gb|ADL55076.1| fagellar hook-basal body protein [Gallionella capsiferriformans ES-2] Length = 498 Score = 83.4 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 31/133 (23%), Positives = 59/133 (44%), Gaps = 3/133 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG- 62 SF GL+ + L T+ +N++N TVGF+ + +F+++ A + + Sbjct: 2 SFQQGLSGLNGASRHLDTIGNNVANASTVGFKQSQAQFADMFAASLSGSGAMPIGTGTKL 61 Query: 63 -KEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGK 120 G+ +T LD A+ G +F L ++ +R+G+F+V G++V+ G Sbjct: 62 VAVAQQFTQGNITNTNNPLDTAISGQGFFRLTDAAGAVLYSRNGQFQVDKTGNVVNNQGH 121 Query: 121 YPVLDMASVPIQI 133 +A I Sbjct: 122 IVSGYLADAAGTI 134 Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 30/98 (30%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFL-----ED 201 + + + + + L + QG N+ + + G L ED Sbjct: 399 YSNGQSRALGQITLTNFINPQGLQPVGNNEWVETSASGSPTTGTPGSSSLGMLQASATED 458 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ MI + + + I + + Sbjct: 459 SNVDLTAELVNMITAQRVYQANAQTIKTQDSLLQTITS 496 >gi|78062976|ref|YP_372884.1| flagellar hook protein FlgE [Burkholderia sp. 383] gi|77970861|gb|ABB12240.1| conserved hypothetical protein [Burkholderia sp. 383] Length = 414 Score = 83.4 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 31/189 (16%), Positives = 62/189 (32%), Gaps = 2/189 (1%) Query: 8 GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGKEY 65 GL+ L + +N++N +TVGF+ + F+++ + Q Sbjct: 6 GLSGLAGAANHLDVIGNNIANANTVGFKQGRANFADMYANSVATSTNTQIGIGTRLVSVQ 65 Query: 66 LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125 G+ ST + LD A+ G+ +F + + +RDG F G++V A + + Sbjct: 66 QQFGQGTINSTKSSLDIAINGNGFFQMSNNGVTTYSRDGVFHRDKSGAIVDAQNRNLMGY 125 Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185 A I + IS + T + + + Sbjct: 126 AAGPGGAINTAATVPLQAPTSNISPQATTKITGQFNLNSQDKVPAKTPFNAGDNTTYNYN 185 Query: 186 LEDLSGVTV 194 ++ Sbjct: 186 SSIQVYDSL 194 Score = 65.3 bits (157), Expect = 7e-09, Method: Composition-based stats. Identities = 11/98 (11%), Positives = 31/98 (31%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLED 201 + + V+ + L + + G + + + T++ LE+ Sbjct: 315 YSNGQSAVLGLIALANFNNPNGLENIGGNQYVETAASGVPQISAPGSTNHGTLQGSALEN 374 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ +I + + + I + + Sbjct: 375 SNVDLTTELVNLIKAQRDYQANAQTIKTQQTVDQTLLN 412 >gi|149188066|ref|ZP_01866361.1| flagellar hook protein E [Vibrio shilonii AK1] gi|148838054|gb|EDL54996.1| flagellar hook protein E [Vibrio shilonii AK1] Length = 432 Score = 83.4 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 32/171 (18%), Positives = 66/171 (38%), Gaps = 6/171 (3%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGK 63 + L+ A + L+T ++N++N +T GF+ + +F +V N K Sbjct: 3 YVSLSGLSAAQLDLNTTSNNIANANTFGFKESRAEFGDVYSNSLFTNAKTTPGGGAQPSK 62 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALES----PRGIILTRDGRFKVTDDGSLVSASG 119 GS IST +D + G +FA+ P+ LTR+G F + D +V+++ Sbjct: 63 IAQQFHEGSSISTNNPMDLRISGTGFFAVSKDRLVPQQNELTRNGAFHLNKDSYMVTSND 122 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170 ++ + + E + E + + ++ + Sbjct: 123 EFLLGYEVNKDTNEVVSYEPRPINIPPEFGKPKQTANIEIGVNLPANGDLK 173 Score = 66.8 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 18/143 (12%), Positives = 43/143 (30%), Gaps = 6/143 (4%) Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ-KGKVIATMGLY 161 F + + + + + + D G S + + + + Sbjct: 288 TLSFSLDSATQFAAPFELTKFQEDGATTGFLTKVDFDEQGNVLGTYSNGENVTLGRVAMV 347 Query: 162 SVDMSQGFVRRENSGISPNIP-----PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 V QG ++ + S T+ G LE SN + E+ +I Sbjct: 348 RVANEQGLDKKGGTQWDSTTASGAKIWGESNKGSFGTINNGTLEQSNIDMTQELVDLISA 407 Query: 217 TQKFNSITTLIDENEKSMLEAIR 239 + F + + +D + + ++ Sbjct: 408 QRNFQANSRALDVHNQLQQNILQ 430 >gi|302874597|ref|YP_003843230.1| fagellar hook-basal body protein [Clostridium cellulovorans 743B] gi|307690792|ref|ZP_07633238.1| fagellar hook-basal body protein [Clostridium cellulovorans 743B] gi|302577454|gb|ADL51466.1| fagellar hook-basal body protein [Clostridium cellulovorans 743B] Length = 474 Score = 83.4 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 59/165 (35%), Gaps = 36/165 (21%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS--- 57 M G+ A + +L + +N++N T F++ ++F++ + Sbjct: 1 MIKGMYSGITGLKANQTKLDVIGNNIANVGTTAFKSSSIRFTDSLYQNMTSASAPGYNLG 60 Query: 58 ---------FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE--------------- 93 V + G+ +TG+ LD A++GD +F + Sbjct: 61 GTNPSVVGLGVKVSAVTTNMTQGNLQNTGSNLDCAIDGDGFFMVATGPLPTGNEFGVTLD 120 Query: 94 ---------SPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASV 129 + G+ TRDG F + DG+L+S SG + Sbjct: 121 TLSHSIINGNGMGVNYTRDGSFSLDADGNLLSNSGYRILGYPLQE 165 Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 12/99 (12%), Positives = 39/99 (39%), Gaps = 13/99 (13%) Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPL-------------EDLSGVTVKRGFLE 200 V+ + + + + G + N+ + + + + + G +E Sbjct: 373 VLGQLAMSTFKNTVGLQKLGNNLYNVSANSGEPIIRSSVGTEKDRSNEDAFGSCVNGVVE 432 Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + + +MI ++ F + + +I +++ + E ++ Sbjct: 433 MSNVDLAEQFTEMIVASRAFQANSKIITTSDEILQELVQ 471 >gi|157738166|ref|YP_001490850.1| flagellar hook protein FlgE [Arcobacter butzleri RM4018] gi|157700020|gb|ABV68180.1| flagellar hook protein FlgE [Arcobacter butzleri RM4018] Length = 583 Score = 83.4 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 28/125 (22%), Positives = 58/125 (46%), Gaps = 5/125 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M ++ G++ ++ +S ++N++N+ T G + ++ F++++ V+ Sbjct: 1 MISALWNGVSGISNYDKGISVESNNIANSSTTGHKLDEITFADMLYTNSG----YGKGVS 56 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASG 119 + GS S+G LD A++G +F + + I TR G F+ T DG L + G Sbjct: 57 TQSISKQFAQGSINSSGGTLDMAIDGKGFFIVSDKAGEIYYTRAGDFQQTKDGWLQTQDG 116 Query: 120 KYPVL 124 + Sbjct: 117 MNVLG 121 Score = 63.0 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 28/243 (11%), Positives = 69/243 (28%), Gaps = 15/243 (6%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 QTS+N A A + +++ T G+ + V +++ I K + Sbjct: 346 QTSYNTAKNAISAYKDLADKISN------TAGY---SASVKDGVLTVESLIAGKSFNITD 396 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-----ILTRDGRFKVTDDGSLVS 116 K + + D+ L + + GS + Sbjct: 397 AKLNDTGVNATVSQEAVTGSGMAMVDSAKDALKEAVEKAGGKFLEITNVMEYANLGSYGT 456 Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS- 175 + + + V + + ++ + + QG ++ Sbjct: 457 SDLNLRLDTLGLVEGDFGEASVSDDGFVFVTSGDNKFLVGRVSTAAFRNEQGLEAVGDNK 516 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 + T +K LE SN + + ++ + + + + I ++ + Sbjct: 517 YSATKSSGTAYNADGMNKIKEKSLERSNVSYSSTLTSLMVYQRAYEASSKSITTSDDFLK 576 Query: 236 EAI 238 AI Sbjct: 577 TAI 579 >gi|312879592|ref|ZP_07739392.1| flagellar basal body rod protein [Aminomonas paucivorans DSM 12260] gi|310782883|gb|EFQ23281.1| flagellar basal body rod protein [Aminomonas paucivorans DSM 12260] Length = 136 Score = 83.4 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 36/104 (34%), Gaps = 14/104 (13%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-------- 52 M S G++ + L + +N++N +T GF+ V F +++ Sbjct: 1 MLRSLYSGVSGVKGHQTYLDVIGNNIANVNTTGFKKSNVLFQDLLYQSNRGAMAPNSDAG 60 Query: 53 ------DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF 90 Q V G TG D A++GD +F Sbjct: 61 RGGINPMQVGLGVNIAAIETIHTQGPMQYTGNRNDMAIQGDGYF 104 >gi|237653583|ref|YP_002889897.1| flagellar basal body FlaE domain protein [Thauera sp. MZ1T] gi|237624830|gb|ACR01520.1| flagellar basal body FlaE domain protein [Thauera sp. MZ1T] Length = 450 Score = 83.4 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 39/190 (20%), Positives = 69/190 (36%), Gaps = 8/190 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND---IDQKISFVA 60 SF GL+ + L +++N++NT+T+GF+T FS+V A Q Sbjct: 2 SFQQGLSGLSVSSKALDIISNNVANTNTIGFKTGSAIFSDVFAASLTGSISGKQVGVGAT 61 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 G + G+ +T LD A+ GD +F + + TR+G+F++ +G + + +G Sbjct: 62 LGAVRQTFTQGNLTTTNNPLDLAINGDGFFVVSRENGPDVYTRNGQFELDKEGFIRTPTG 121 Query: 120 ----KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 + + V G + G + R Sbjct: 122 ERLKGFQSPVTPGALPTPIGGLKDVQVPIVGSQPMPTSRVEIGGNLDANDLSAAQRYPQL 181 Query: 176 GISPNIPPTP 185 S P P Sbjct: 182 FGSTFTFPLP 191 Score = 71.1 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 34/98 (34%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP-----PTPLEDLSGVTVKRGFLED 201 + + + +A + L + + N+ P+ + V G +ED Sbjct: 351 YTNGETRELAQLALQTFRNPNALLSIGNNFWEATTESGLTAPSKAGEGVAGVVSAGMIED 410 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +N E+ QMI + + + I ++ + + Sbjct: 411 ANVELTNELVQMIVQQRNYQANAQSIKAQDQVLQTLVN 448 >gi|170734374|ref|YP_001766321.1| flagellar hook protein FlgE [Burkholderia cenocepacia MC0-3] gi|254246965|ref|ZP_04940286.1| Flagellar hook protein FlgE [Burkholderia cenocepacia PC184] gi|124871741|gb|EAY63457.1| Flagellar hook protein FlgE [Burkholderia cenocepacia PC184] gi|169817616|gb|ACA92199.1| flagellar basal body FlaE domain protein [Burkholderia cenocepacia MC0-3] Length = 413 Score = 83.4 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 30/189 (15%), Positives = 63/189 (33%), Gaps = 2/189 (1%) Query: 8 GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVASGKEY 65 GL+ L + +N++N +TVGF++ +F+++ Q Sbjct: 6 GLSGLSGASNALDVIGNNIANANTVGFKSSTAQFADMYANSVATSVNTQIGIGTTLNSVQ 65 Query: 66 LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125 G+ +T + LD A+ G+ +F + + +RDG F+ +G +V+A G + Sbjct: 66 QQFGQGTINTTNSSLDVAINGNGFFQMSNNGVTTYSRDGTFQRDKNGYIVNAQGMNLMGY 125 Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185 MA + + I+ T + + Sbjct: 126 MADKNGVLNTAQTVPLQAPTTNIAPTATTKITGQFNLNSQDTVPAKTPFNAADTTTYNYS 185 Query: 186 LEDLSGVTV 194 ++ Sbjct: 186 TSIQVYDSL 194 Score = 65.7 bits (158), Expect = 6e-09, Method: Composition-based stats. Identities = 13/125 (10%), Positives = 36/125 (28%), Gaps = 5/125 (4%) Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 D + + + V+ + L + + G V + + Sbjct: 288 NNLAQDGYASGTLTTYSIGTDGKLTGNYSNGQTAVLGQIALANFNNPNGLVNLGGNQYAE 347 Query: 180 NIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 + + + T++ LE+SN + ++ +I + + + I + Sbjct: 348 SAASGVPQVSAPGSTNHGTLQGSALENSNVDLTSQLVNLITAQRNYQANAQTIKTQQTVD 407 Query: 235 LEAIR 239 I Sbjct: 408 QTLIN 412 >gi|323498420|ref|ZP_08103416.1| flagellar hook protein FlgE [Vibrio sinaloensis DSM 21326] gi|323316493|gb|EGA69508.1| flagellar hook protein FlgE [Vibrio sinaloensis DSM 21326] Length = 438 Score = 83.4 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 29/132 (21%), Positives = 57/132 (43%), Gaps = 6/132 (4%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGK 63 + L+ A + L+T ++N++N +T GF+ + +F +V N V + K Sbjct: 3 YVALSGISAAQLDLNTTSNNIANANTYGFKESRAEFGDVYSNSLFTNAKTTPGGGVQAAK 62 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWF----ALESPRGIILTRDGRFKVTDDGSLVSASG 119 GS + T +D + G +F +P LTR+G F + D +V+A+ Sbjct: 63 VAQQFHEGSSVYTNNPMDLRISGTGFFAVAKDRLTPTTNELTRNGAFHLNKDNYMVTAND 122 Query: 120 KYPVLDMASVPI 131 ++ + + Sbjct: 123 EFLLGYQVNGDT 134 Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 12/98 (12%), Positives = 35/98 (35%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI-----PPTPLEDLSGVTVKRGFLED 201 + + + + + V QG ++ + S ++ G LE Sbjct: 339 YSNGENITLGRVAMVRVANEQGLDKKGGTQWDSTQFSGDKIWGESNKGSFGSINSGTLEQ 398 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ +I + F + + ++ + ++ ++ Sbjct: 399 SNIDMTQELVDLITAQRNFQANSRSLEVHNQTQQNILQ 436 >gi|119947177|ref|YP_944857.1| flagellar hook protein FlgE [Psychromonas ingrahamii 37] gi|119865781|gb|ABM05258.1| flagellar hook protein FlgE [Psychromonas ingrahamii 37] Length = 398 Score = 83.4 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 6/132 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SFNI ++ A ++L+T+++N++N T GF+ + +F+ + + Q SG Sbjct: 2 SFNIAISGLNATNKQLNTISNNIANVSTYGFKESRAEFASIY-----NGGQAGGVEVSGI 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122 GS +TG LD A+ G+ +FA + I TR G F D +VS++G Sbjct: 57 TQNFDRNGSLEATGRALDLAISGNGFFATVDNKGQQIYTRSGAFSTDKDNFIVSSAGNKL 116 Query: 123 VLDMASVPIQIP 134 + Sbjct: 117 QGYTVDAKANLQ 128 Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats. Identities = 9/105 (8%), Positives = 30/105 (28%), Gaps = 5/105 (4%) Query: 142 VGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKR 196 + + + ++ + L + N+ + + + Sbjct: 294 MIFAQFTNGQSQLQGQLVLADFPNPTALEQSNNTSWMQTFGSGTPVKGAPGSGVLGKLTS 353 Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 LE SN + E+ ++ + + + T I ++ + Sbjct: 354 NMLETSNVDLTSELVSLMTAQRNYQANTKTISTADQLTKALFNAV 398 >gi|212639558|ref|YP_002316078.1| flagellar hook protein FlgE [Anoxybacillus flavithermus WK1] gi|212561038|gb|ACJ34093.1| Flagellar hook protein FlgE [Anoxybacillus flavithermus WK1] Length = 460 Score = 83.4 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 48/135 (35%), Gaps = 7/135 (5%) Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 + T ++A GK +D Q G G + Sbjct: 330 QIPKTAKSFGITADGKVTFIDSNGQLKIAGQILLAQFPNPTGLEKMGGNT------FKET 383 Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224 + G + R +G++ N P + + + G LE SN + E +MI + F + T Sbjct: 384 NNSGKLDRNANGLTINELSRPGLNGA-GEIISGALEMSNVDLSEEFTEMIVAQRGFQANT 442 Query: 225 TLIDENEKSMLEAIR 239 +I +++ + E + Sbjct: 443 RIITTSDEILQELVN 457 Score = 79.5 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 59/167 (35%), Gaps = 41/167 (24%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50 M S G+ + +L + +N+SN +T G++ +V F ++V + Sbjct: 1 MLRSMFTGIGGIRNFQYKLDVIGNNISNVNTYGYKKARVTFKDLVSQQISAATSSTGTRG 60 Query: 51 --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF------------------ 90 + Q G GS +T LD AL GD +F Sbjct: 61 GINGKQIGLGSGLGSIETIHTQGSTQTTSRPLDLALGGDGFFVVGSINDVTLISMDGPAG 120 Query: 91 -----------ALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDM 126 ++ + TR G F + + G +V++ G+Y + + Sbjct: 121 KLGTNKVNTGVPIDRVFNLSFTRAGNFYLDEYGYIVNSDGQYLIGEA 167 >gi|330943207|gb|EGH45614.1| flagellar hook protein FlgE [Pseudomonas syringae pv. pisi str. 1704B] Length = 368 Score = 83.4 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 29/134 (21%), Positives = 52/134 (38%), Gaps = 4/134 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS----FV 59 SFNIGL+ A + L +N++N T GF++ + +F++ S Sbjct: 2 SFNIGLSGLYAANKSLDVTGNNIANVATTGFKSSRAEFADQYAQSIRGTSGNTSVGSGVT 61 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119 + + T LD A+ GD +F + + + TR G F +G +V++S Sbjct: 62 TAAVSQQFSQGSLTTGTANSLDLAINGDGFFMMSNNGEKLYTRAGAFHTDKEGYVVNSSN 121 Query: 120 KYPVLDMASVPIQI 133 + Sbjct: 122 MKLQGYNVDANGSV 135 >gi|330893050|gb|EGH25711.1| flagellar hook protein FlgE [Pseudomonas syringae pv. mori str. 301020] Length = 165 Score = 83.4 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 28/133 (21%), Positives = 58/133 (43%), Gaps = 3/133 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF---VA 60 SFN ++ A +RL +N++N+ T+GF++ + +FS + A + + Sbjct: 2 SFNTAISGIHAANKRLEVAGNNIANSGTIGFKSSRAQFSALYSASQLGSGRNAVGDGVCL 61 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + + + S ++G LD ++G+ +F + + TR G F +V + G Sbjct: 62 ASMQQNFNQGESMTTSGNPLDMRIQGNGFFVVSDGGSLAYTRAGAFLKDAANFVVDSEGG 121 Query: 121 YPVLDMASVPIQI 133 A+ +I Sbjct: 122 RLQGYAANEQGEI 134 >gi|237810461|ref|YP_002894912.1| flagellar hook protein FlgE [Burkholderia pseudomallei MSHR346] gi|237503327|gb|ACQ95645.1| flagellar hook protein FlgE [Burkholderia pseudomallei MSHR346] Length = 413 Score = 83.4 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 32/201 (15%), Positives = 65/201 (32%), Gaps = 6/201 (2%) Query: 8 GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVASGKEY 65 GL+ + L + +N++N +TVGF+ +FS++ + Sbjct: 6 GLSGLVGASSDLDVIGNNIANANTVGFKGSTAQFSDMYANSVASAVNNPIGIGTMLASVQ 65 Query: 66 LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125 G+ S+ + L+ A+ G+ +F + + +RDG F+ +G +V++ G + Sbjct: 66 QQFSQGTITSSTSSLNVAINGNGFFQMSNNGVTTYSRDGTFQRDKNGYIVNSQGLNLMGY 125 Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185 A+ I + I+ T + P Sbjct: 126 AANANGVINTAATVPLQAPTTNIAPTATTKITGQFNLNSQDAVPATTPFNYTDPTSYNYT 185 Query: 186 LEDLSGVTVKRGFLEDSNANS 206 T+ N N Sbjct: 186 TSVQVFDTLGGSQ----NVNL 202 Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 12/98 (12%), Positives = 34/98 (34%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLED 201 + + + + L + + G V N+ + + + T++ LE+ Sbjct: 315 YSNGQTSTLGQIVLANFNNPNGLVNVGNNQYVESAASGVPQISAPGSTNHGTLQGSALEN 374 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + ++ ++I + + + I + I Sbjct: 375 SNVDLTSQLVKLITAQRNYQANAQTIKTQQTVDQTLIN 412 >gi|134095097|ref|YP_001100172.1| flagellar hook protein FlgE [Herminiimonas arsenicoxydans] gi|133739000|emb|CAL62048.1| Flagellar hook protein FlgE [Herminiimonas arsenicoxydans] Length = 418 Score = 83.4 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 34/132 (25%), Positives = 64/132 (48%), Gaps = 2/132 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID--QKISFVAS 61 SF GL+ A + L + +N++N+ TVGF+ +V+F+++ + + Q Sbjct: 2 SFQQGLSGLNAASKSLEAIGNNVANSGTVGFKQSQVQFADIYASTLSGSGAAQIGIGTQI 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 + G+ ++ LD A+ GD +F + S I R+G+F+++ +G + SASG Sbjct: 62 ARVAQLFSQGNITASNNPLDMAINGDGFFRMSSGGTISYARNGQFELSKEGFIQSASGAR 121 Query: 122 PVLDMASVPIQI 133 MA + Sbjct: 122 LTGYMADANGVV 133 Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 19/158 (12%), Positives = 44/158 (27%), Gaps = 8/158 (5%) Query: 90 FALESPRGIILTRDGRFKVTDDGSLV--SASGKYPVLDMASVPIQIPQKDEIFNVGEKGE 147 + T + G+ + G L P + + + G Sbjct: 259 LVVPMDVSTGATTPFNIVIDHTGTQQFAQSFGVNKQLPDGFPPGTLTAFNVASDGSIVGR 318 Query: 148 ISQKG-KVIATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLED 201 S V+ + L S G ++ + +V+ +E+ Sbjct: 319 YSNGKVNVLGQVILSSFANPNGLQNIGDNQWVETAESGVALTSAPGSSGLGSVQSARIEE 378 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ MI + + + I ++ + + Sbjct: 379 SNVDLTAELVNMITAQRYYQANAQTIKTQDQILQTLVN 416 >gi|294140185|ref|YP_003556163.1| flagellar hook protein FlgE [Shewanella violacea DSS12] gi|293326654|dbj|BAJ01385.1| flagellar hook protein FlgE [Shewanella violacea DSS12] Length = 453 Score = 83.0 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 36/125 (28%), Positives = 57/125 (45%), Gaps = 5/125 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61 SFNI L+ A ++ L+T A+N++N +++GF+ + +FS+V N V + Sbjct: 2 SFNIALSGIAAAQKDLNTTANNIANVNSIGFKESRAEFSDVYANSIFSNSKTAVGGGVTT 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALE---SPRGIILTRDGRFKVTDDGSLVSAS 118 + GS T LD A+ G +F S + TR G FKV LV + Sbjct: 62 SQVAQQFHQGSMQFTNNALDMAINGGGFFVTSSDLSGKEQSFTRAGAFKVDSSNYLVDSQ 121 Query: 119 GKYPV 123 G + Sbjct: 122 GNFLQ 126 Score = 65.7 bits (158), Expect = 6e-09, Method: Composition-based stats. Identities = 15/137 (10%), Positives = 39/137 (28%), Gaps = 5/137 (3%) Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 + D +V + + + +A + L Q Sbjct: 315 NNPTQYASTFEVTELNQDGTTVGRLTNVEVGADGLINASYSNGTTVALARVALARFANEQ 374 Query: 168 GFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222 G + N+ + + +++ LE SN + E+ +I + F + Sbjct: 375 GLTQVGNTSWKASQDSGLALAGEANTGTFGSIRSSALEQSNVDLTTELVDLISAQRNFQA 434 Query: 223 ITTLIDENEKSMLEAIR 239 + ++ N ++ Sbjct: 435 NSRTLEVNNTLQQTILQ 451 >gi|94266588|ref|ZP_01290271.1| conserved hypothetical protein [delta proteobacterium MLMS-1] gi|93452783|gb|EAT03318.1| conserved hypothetical protein [delta proteobacterium MLMS-1] Length = 619 Score = 83.0 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 26/205 (12%), Positives = 65/205 (31%), Gaps = 10/205 (4%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 G++ ++ ++ + DN++N +T +++ + F ++ + + + + Sbjct: 5 NMIFNGVSGLNSMSGNMAVMGDNIANVNTTSYKSSQASFQNILTSSQERFGEIGNGSQVA 64 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESP--RGIILTRDGRF-------KVTDDGS 113 + G +T D A+ G +F + +P ++ TRDG+F + Sbjct: 65 AITKNFRPGDLETTNQSTDMAISGKGFFMVNNPLADEMLYTRDGQFKLEKSAITPEGFYN 124 Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRE 173 L + +G + +I + +A Sbjct: 125 LATPAGHLVQGRNLAANGGADNLGDILIQEVSDPRATGNVSLAMNLQSKPGREDA-QPLH 183 Query: 174 NSGISPNIPPTPLEDLSGVTVKRGF 198 S P + T+ + F Sbjct: 184 TSWNGAAAEPLAADRYDYRTIIQAF 208 Score = 68.4 bits (165), Expect = 9e-10, Method: Composition-based stats. Identities = 20/145 (13%), Positives = 40/145 (27%), Gaps = 6/145 (4%) Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-IATMG 159 +R + + +AS + + G S + V A + Sbjct: 473 SRGDDLQPLRTTNYATASATLSQQQDGFGEGYLQDISVKPDGTMVGRYSNQQSVEQAQVM 532 Query: 160 LYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMI 214 L +G ++ + S V LE SN + E +I Sbjct: 533 LADFADYRGLEPTSHNAYKATAMAGEPTIGVAGEGSFGKVLGNTLEGSNVDLGREFSDLI 592 Query: 215 HLTQKFNSITTLIDENEKSMLEAIR 239 + F + + I ++ +R Sbjct: 593 MTQRIFQANSKSITTADEVFDTLMR 617 >gi|269961599|ref|ZP_06175961.1| flagellar hook protein [Vibrio harveyi 1DA3] gi|269833640|gb|EEZ87737.1| flagellar hook protein [Vibrio harveyi 1DA3] Length = 437 Score = 83.0 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 30/200 (15%), Positives = 72/200 (36%), Gaps = 7/200 (3%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGK 63 + L+ + + L+T ++N++N +T GF+ + +FS+V N + + Sbjct: 3 YVSLSGLSSAQLDLNTTSNNIANANTYGFKESRAEFSDVYSNSLFTNAKTTPGGGAQANQ 62 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWF----ALESPRGIILTRDGRFKVTDDGSLVSASG 119 GS I T +D + G +F P+ +TR+G F + D +V+A+ Sbjct: 63 VAQQFHEGSSIYTNNPMDLRVSGTGFFAVAKDRLIPQQNEMTRNGAFHLNKDNYMVTAND 122 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV-RRENSGIS 178 ++ + + E + E + + ++ + + Sbjct: 123 EFLLGYQVNPESGEVSSYEPQPINIPAEFGKPKQTANIEVGVNLPANGDLKDPTQFDFSD 182 Query: 179 PNIPPTPLEDLSGVTVKRGF 198 P+ ++ + + Sbjct: 183 PDTYNRSTSSTIYDSMGQSY 202 Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 34/98 (34%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI-----PPTPLEDLSGVTVKRGFLED 201 + + + + L V QG ++ + S T+ G LE Sbjct: 338 YSNGENVTLGRVALVRVPNEQGLDKKGGTQWDSTQFSGDKIWGESNKGSFGTINNGMLEQ 397 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ +I + F + + ++ + + ++ Sbjct: 398 SNIDMTQELVDLISAQRNFQANSRALEVHNQLQQNILQ 435 >gi|167945179|ref|ZP_02532253.1| hypothetical protein Epers_01140 [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 126 Score = 83.0 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 33/98 (33%), Gaps = 5/98 (5%) Query: 149 SQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLEDSN 203 + I + L QG ++ + + S T+ +G LE SN Sbjct: 29 NTDPTQIGQIELAYFANPQGLEPIGDNLFRESAASGGVNTAIPGSDSTGTLMQGALESSN 88 Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 N + E+ MI + + + I ++ + + Sbjct: 89 VNVVEELVNMIETQRAYEMNSKAISTTDEMLSYINNQL 126 >gi|153834474|ref|ZP_01987141.1| FlgE [Vibrio harveyi HY01] gi|156973586|ref|YP_001444493.1| flagellar hook protein FlgE [Vibrio harveyi ATCC BAA-1116] gi|148869170|gb|EDL68202.1| FlgE [Vibrio harveyi HY01] gi|156525180|gb|ABU70266.1| hypothetical protein VIBHAR_01289 [Vibrio harveyi ATCC BAA-1116] Length = 437 Score = 83.0 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 30/200 (15%), Positives = 72/200 (36%), Gaps = 7/200 (3%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGK 63 + L+ + + L+T ++N++N +T GF+ + +FS+V N + + Sbjct: 3 YVSLSGLSSAQLDLNTTSNNIANANTYGFKESRAEFSDVYSNSLFTNAKTTPGGGAQANQ 62 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWF----ALESPRGIILTRDGRFKVTDDGSLVSASG 119 GS I T +D + G +F P+ +TR+G F + D +V+A+ Sbjct: 63 VAQQFHEGSSIYTNNPMDLRVSGTGFFAVAKDRLIPQQNEMTRNGAFHLNKDNYMVTAND 122 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV-RRENSGIS 178 ++ + + E + E + + ++ + + Sbjct: 123 EFLLGYQVNPESGEVSSYEPQPINIPAEFGKPKQTANIEVGVNLPANGDLKDPTQFDFSD 182 Query: 179 PNIPPTPLEDLSGVTVKRGF 198 P+ ++ + + Sbjct: 183 PDTYNRSTSSTIYDSMGQSY 202 Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 34/98 (34%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI-----PPTPLEDLSGVTVKRGFLED 201 + + + + L V QG ++ + S T+ G LE Sbjct: 338 YSNGENVTLGRVALVRVPNEQGLDKKGGTQWDSTQFSGDKIWGESNKGSFGTINNGMLEQ 397 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ +I + F + + ++ + + ++ Sbjct: 398 SNIDMTQELVDLISAQRNFQANSRALEVHNQLQQNILQ 435 >gi|313144034|ref|ZP_07806227.1| flagellar hook protein FlgE [Helicobacter cinaedi CCUG 18818] gi|313129065|gb|EFR46682.1| flagellar hook protein FlgE [Helicobacter cinaedi CCUG 18818] Length = 707 Score = 83.0 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 58/168 (34%), Gaps = 15/168 (8%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-------------KNDIDQKISF 58 A + L ++N++N +TVGF+ + F +++ I + Sbjct: 1 MQAHQIALDVESNNIANVNTVGFKYSRASFVDMLSQIKLIATSPYKNGLGGQNDFSIGLG 60 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGRFKVTDDGSLVS 116 V G+ +T + D A+EGD +F + RG TR+G F +G+LV+ Sbjct: 61 VGIDATTKVFSQGNTQNTDVKTDIAIEGDGFFIISPDRGTTHNYTRNGEFLFDANGNLVT 120 Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 G + + + + + I + Sbjct: 121 TGGYVVQGWVRPPLEAAESGTMSDFDFFRVDNTGPVRNIQIDPGMVMP 168 Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 14/128 (10%), Positives = 41/128 (32%), Gaps = 5/128 (3%) Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + + + + + + + +A + L + + G + Sbjct: 577 SETYAINQNGYQAGDLMDIRFDSNGSLLGAFSNGRSIALAQVALANFANNTGLQAEGGNV 636 Query: 177 ISPNIPPTPLEDLSGVTVKRG-----FLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 S + T +RG LE SN + + Q+I + + F + + + ++ Sbjct: 637 FSQTGNSGEPMIGAANTGRRGGVSGSKLEMSNVDLSRSLTQLIVVQRGFQANSKAVTTSD 696 Query: 232 KSMLEAIR 239 + + + Sbjct: 697 QILNTLLN 704 >gi|309788146|ref|ZP_07682752.1| flagellar basal-body rod flgG domain protein [Shigella dysenteriae 1617] gi|308923998|gb|EFP69499.1| flagellar basal-body rod flgG domain protein [Shigella dysenteriae 1617] Length = 82 Score = 83.0 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 24/56 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56 M +S I A + + +A+N++N T GF+ + F +++ + Sbjct: 1 MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQS 56 >gi|27381969|ref|NP_773498.1| flagellar hook protein FlgE [Bradyrhizobium japonicum USDA 110] gi|27355139|dbj|BAC52123.1| flagellar hook protein [Bradyrhizobium japonicum USDA 110] Length = 410 Score = 83.0 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 38/194 (19%), Positives = 72/194 (37%), Gaps = 4/194 (2%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 G++ A +LSTV+DN++N +T G++ +FS ++ + + V + Sbjct: 7 MRTGVSGMSAQSNKLSTVSDNIANVNTTGYKRASTEFSSLILKSGSG-NYDSGAVETTVR 65 Query: 65 YLSKEVGSFISTGTELDFALEGDAWFALESPRGI--ILTRDGRFKVTDDGSLVSASGKYP 122 Y + G T + D A++G+ +F + + LTR G F G+LV+A+G Y Sbjct: 66 YAISDAGHTQFTTSTTDLAVQGNGFFVVSNANNTQQYLTRAGSFVPDAQGNLVNAAGYYL 125 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 L Q + V +T G + P Sbjct: 126 -LGQPGKVTNFSQNSLSGMQIVNIAQVSQVPVPSTAGTLTTGNLDPKAAVIAGPPGPASY 184 Query: 183 PTPLEDLSGVTVKR 196 + ++ + + Sbjct: 185 SSKSSIVAYNNIGQ 198 Score = 68.0 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 31/94 (32%), Gaps = 5/94 (5%) Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNAN 205 + + T+ L V + S N+ + T++ G LEDSN + Sbjct: 314 QQMTLYTIMLADVPSPDNLTPEPGNVYSTNMNSGNAQAGNAGTGGLGTIQSGALEDSNVD 373 Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E+ MI + F + + + + Sbjct: 374 LADELTGMIEAQRGFTANSKSFQTGADLLDVVVN 407 >gi|53717914|ref|YP_106900.1| flagellar hook protein FlgE [Burkholderia pseudomallei K96243] gi|53724565|ref|YP_104798.1| flagellar hook protein FlgE [Burkholderia mallei ATCC 23344] gi|67641538|ref|ZP_00440315.1| flagellar hook protein FlgE [Burkholderia mallei GB8 horse 4] gi|76810959|ref|YP_331879.1| flagellar hook protein FlgE [Burkholderia pseudomallei 1710b] gi|121599135|ref|YP_994291.1| flagellar hook protein FlgE [Burkholderia mallei SAVP1] gi|124384593|ref|YP_001028060.1| flagellar hook protein FlgE [Burkholderia mallei NCTC 10229] gi|126449658|ref|YP_001082867.1| flagellar hook protein FlgE [Burkholderia mallei NCTC 10247] gi|126453793|ref|YP_001064564.1| flagellar hook protein FlgE [Burkholderia pseudomallei 1106a] gi|167001537|ref|ZP_02267332.1| flagellar hook protein FlgE [Burkholderia mallei PRL-20] gi|167717660|ref|ZP_02400896.1| flagellar hook protein FlgE [Burkholderia pseudomallei DM98] gi|167736703|ref|ZP_02409477.1| flagellar hook protein FlgE [Burkholderia pseudomallei 14] gi|167813802|ref|ZP_02445482.1| flagellar hook protein FlgE [Burkholderia pseudomallei 91] gi|167822318|ref|ZP_02453789.1| flagellar hook protein FlgE [Burkholderia pseudomallei 9] gi|167843908|ref|ZP_02469416.1| flagellar hook protein FlgE [Burkholderia pseudomallei B7210] gi|167892410|ref|ZP_02479812.1| flagellar hook protein FlgE [Burkholderia pseudomallei 7894] gi|167900908|ref|ZP_02488113.1| flagellar hook protein FlgE [Burkholderia pseudomallei NCTC 13177] gi|167909127|ref|ZP_02496218.1| flagellar hook protein FlgE [Burkholderia pseudomallei 112] gi|167917164|ref|ZP_02504255.1| flagellar hook protein FlgE [Burkholderia pseudomallei BCC215] gi|217424944|ref|ZP_03456440.1| flagellar basal body protein FlaE [Burkholderia pseudomallei 576] gi|226199793|ref|ZP_03795344.1| flagellar basal body protein FlaE [Burkholderia pseudomallei Pakistan 9] gi|242315744|ref|ZP_04814760.1| flagellar basal body protein FlaE [Burkholderia pseudomallei 1106b] gi|254182140|ref|ZP_04888737.1| flagellar basal body protein FlaE [Burkholderia pseudomallei 1655] gi|254188070|ref|ZP_04894582.1| flagellar basal body protein FlaE [Burkholderia pseudomallei Pasteur 52237] gi|254196353|ref|ZP_04902777.1| flagellar basal body protein FlaE [Burkholderia pseudomallei S13] gi|254201896|ref|ZP_04908260.1| flagellar hook protein FlgE [Burkholderia mallei FMH] gi|254207230|ref|ZP_04913581.1| flagellar hook protein FlgE [Burkholderia mallei JHU] gi|254259636|ref|ZP_04950690.1| flagellar basal body protein FlaE [Burkholderia pseudomallei 1710a] gi|254295814|ref|ZP_04963271.1| flagellar basal body protein FlaE [Burkholderia pseudomallei 406e] gi|254359732|ref|ZP_04976003.1| flagellar hook protein FlgE [Burkholderia mallei 2002721280] gi|52208328|emb|CAH34261.1| putative flagellar hook protein [Burkholderia pseudomallei K96243] gi|52427988|gb|AAU48581.1| flagellar hook protein FlgE [Burkholderia mallei ATCC 23344] gi|76580412|gb|ABA49887.1| Flagella basal body rod protein [Burkholderia pseudomallei 1710b] gi|121227945|gb|ABM50463.1| flagellar hook protein FlgE [Burkholderia mallei SAVP1] gi|124292613|gb|ABN01882.1| flagellar hook protein FlgE [Burkholderia mallei NCTC 10229] gi|126227435|gb|ABN90975.1| flagellar basal body protein FlaE [Burkholderia pseudomallei 1106a] gi|126242528|gb|ABO05621.1| flagellar hook protein FlgE [Burkholderia mallei NCTC 10247] gi|147747790|gb|EDK54866.1| flagellar hook protein FlgE [Burkholderia mallei FMH] gi|147752772|gb|EDK59838.1| flagellar hook protein FlgE [Burkholderia mallei JHU] gi|148028946|gb|EDK86878.1| flagellar hook protein FlgE [Burkholderia mallei 2002721280] gi|157805870|gb|EDO83040.1| flagellar basal body protein FlaE [Burkholderia pseudomallei 406e] gi|157935750|gb|EDO91420.1| flagellar basal body protein FlaE [Burkholderia pseudomallei Pasteur 52237] gi|169653096|gb|EDS85789.1| flagellar basal body protein FlaE [Burkholderia pseudomallei S13] gi|184212678|gb|EDU09721.1| flagellar basal body protein FlaE [Burkholderia pseudomallei 1655] gi|217391964|gb|EEC31990.1| flagellar basal body protein FlaE [Burkholderia pseudomallei 576] gi|225928144|gb|EEH24180.1| flagellar basal body protein FlaE [Burkholderia pseudomallei Pakistan 9] gi|238522489|gb|EEP85933.1| flagellar hook protein FlgE [Burkholderia mallei GB8 horse 4] gi|242138983|gb|EES25385.1| flagellar basal body protein FlaE [Burkholderia pseudomallei 1106b] gi|243062738|gb|EES44924.1| flagellar hook protein FlgE [Burkholderia mallei PRL-20] gi|254218325|gb|EET07709.1| flagellar basal body protein FlaE [Burkholderia pseudomallei 1710a] Length = 413 Score = 83.0 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 32/201 (15%), Positives = 64/201 (31%), Gaps = 6/201 (2%) Query: 8 GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVASGKEY 65 GL+ L + +N++N +TVGF+ +FS++ + Sbjct: 6 GLSGLAGASSDLDVIGNNIANANTVGFKGSTAQFSDMYANSVASAVNNPIGIGTMLASVQ 65 Query: 66 LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125 G+ S+ + L+ A+ G+ +F + + +RDG F+ +G +V++ G + Sbjct: 66 QQFSQGTITSSTSSLNVAINGNGFFQMSNNGVTTYSRDGTFQRDKNGYIVNSQGLNLMGY 125 Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185 A+ I + I+ T + P Sbjct: 126 AANANGVINTAATVPLQAPTTNIAPTATTKITGQFNLNSQDAVPATTPFNYTDPTSYNYT 185 Query: 186 LEDLSGVTVKRGFLEDSNANS 206 T+ N N Sbjct: 186 TSVQVFDTLGGSQ----NVNL 202 Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 12/98 (12%), Positives = 34/98 (34%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLED 201 + + + + L + + G V N+ + + + T++ LE+ Sbjct: 315 YSNGQTSTLGQIVLANFNNPNGLVNVGNNQYVESAASGVPQISAPGSTNHGTLQGSALEN 374 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + ++ ++I + + + I + I Sbjct: 375 SNVDLTSQLVKLITAQRNYQANAQTIKTQQTVDQTLIN 412 >gi|330953721|gb|EGH53981.1| flagellar hook protein FlgE [Pseudomonas syringae Cit 7] Length = 244 Score = 83.0 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 30/134 (22%), Positives = 52/134 (38%), Gaps = 4/134 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS----FV 59 SFNIGL+ A + L +N++N T GF++ + +F++ S Sbjct: 2 SFNIGLSGLYAANKSLDVTGNNIANVATTGFKSSRAEFADQYAQSIRGTSGNTSVGSGVT 61 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119 + + T LD A+ GD +F L + + TR G F +G +V++S Sbjct: 62 TAAVSQQFSQGSLTTGTANSLDLAINGDGFFMLSNNGEKLYTRAGAFHTDKEGYVVNSSN 121 Query: 120 KYPVLDMASVPIQI 133 + Sbjct: 122 MKLQGYNVDANGSV 135 >gi|240145497|ref|ZP_04744098.1| flagellar basal body and hook protein [Roseburia intestinalis L1-82] gi|257202312|gb|EEV00597.1| flagellar basal body and hook protein [Roseburia intestinalis L1-82] Length = 551 Score = 83.0 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 26/145 (17%), Positives = 53/145 (36%), Gaps = 18/145 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M S ++ + ++ + +N++N +TV F++ V F +V+ + ++ + Sbjct: 1 MMRSMYSAVSGLKTHQTKMDVIGNNIANVNTVAFKSSSVVFQDVLYQMTSNASGANAATG 60 Query: 61 S---------------GKEYLSKEVGSFISTGTELDFALEGD---AWFALESPRGIILTR 102 + G+ +TG D L +F + + + TR Sbjct: 61 TGGVNAKQIGLGVTTGATNLSITTSGAAETTGRAFDIRLSDQSTTNFFVVNNGSENLFTR 120 Query: 103 DGRFKVTDDGSLVSASGKYPVLDMA 127 G F V G+L S Y V+ Sbjct: 121 AGSFYVDGAGNLCMTSTGYTVMGWQ 145 Score = 73.4 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 14/129 (10%), Positives = 40/129 (31%), Gaps = 6/129 (4%) Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + + I + + + + + + + + G + + Sbjct: 420 SIDDGVTGKGKKLGAMIGISIDNNGLITGIYDNGNKETLGQIAVAQFANASGLEKVGENC 479 Query: 177 ISPNIPPTPLEDLSG------VTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + + + ++ G LE SN + E QMI + F + + +I + Sbjct: 480 YRTTLNSGEFDGIGDEISADGSSMTSGELEMSNVDLSTEFTQMIITQRGFQANSRIITTS 539 Query: 231 EKSMLEAIR 239 + + E + Sbjct: 540 DTLLEELVN 548 >gi|126444045|ref|YP_001061246.1| flagellar hook protein FlgE [Burkholderia pseudomallei 668] gi|134280998|ref|ZP_01767708.1| flagellar biosynthesis/type III secretory pathway lipoprotein [Burkholderia pseudomallei 305] gi|167725930|ref|ZP_02409166.1| flagellar hook protein FlgE [Burkholderia pseudomallei DM98] gi|167905090|ref|ZP_02492295.1| flagellar hook protein FlgE [Burkholderia pseudomallei NCTC 13177] gi|254182894|ref|ZP_04889487.1| flagellar hook protein FlgE [Burkholderia pseudomallei 1655] gi|254299686|ref|ZP_04967135.1| flagellar hook protein FlgE [Burkholderia pseudomallei 406e] gi|125657218|gb|ABN48706.1| flagellar hook protein FlgE [Burkholderia pseudomallei] gi|126223536|gb|ABN87041.1| flagellar hook protein FlgE [Burkholderia pseudomallei 668] gi|134248020|gb|EBA48104.1| flagellar biosynthesis/type III secretory pathway lipoprotein [Burkholderia pseudomallei 305] gi|157809637|gb|EDO86807.1| flagellar hook protein FlgE [Burkholderia pseudomallei 406e] gi|184213428|gb|EDU10471.1| flagellar hook protein FlgE [Burkholderia pseudomallei 1655] Length = 395 Score = 83.0 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 37/196 (18%), Positives = 76/196 (38%), Gaps = 8/196 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SFNI L+ A+ +L+T++ N++N +T GF+ + F+ +V + + S S Sbjct: 2 SFNIALSGINAINSQLNTISHNIANANTYGFKAGRANFATMVAGTQANGTYIGSITQSVG 61 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLVSASGKYP 122 + TG LD A++G+ +F + G + TR G F+ DG +V G+ Sbjct: 62 TRGGF-----LPTGRALDGAIDGNGFFVTKDSDGSMLFTRFGYFQRDADGYIVDGFGRRA 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + V ++ + F + +++ + ++ Sbjct: 117 QG--YGASGAYGDIRVPTDTEPAKASDSLEYVGNLSADWAAPKNPNFDKDDDTSFNHSVA 174 Query: 183 PTPLEDLSGVTVKRGF 198 T + L + + Sbjct: 175 STVYDSLGRQHIVTQY 190 Score = 73.4 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 12/92 (13%), Positives = 33/92 (35%), Gaps = 5/92 (5%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYE 209 + ++ L + G ++ + + V G LE SNA+ E Sbjct: 304 VGSLALATFANQDGLSAVGDTAWRASAASGNPLIGSAGSGALGKVVAGSLELSNADVTQE 363 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 + M+ + + + + ++ + M ++ + Sbjct: 364 LVDMMSAQRNYQANSKVLSTENQMMQALMQAL 395 >gi|254780525|ref|YP_003064938.1| flagellar hook protein FlgE [Candidatus Liberibacter asiaticus str. psy62] gi|254040202|gb|ACT56998.1| flagellar hook protein FlgE [Candidatus Liberibacter asiaticus str. psy62] Length = 421 Score = 83.0 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 31/124 (25%), Positives = 59/124 (47%), Gaps = 2/124 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 S ++ A R+S V+DN++N DTVG++ + FS +V ++ + Sbjct: 6 SMKTAMSGMDAQSNRVSAVSDNIANVDTVGYKRTAIAFSSLVFPSTSNSYVSG-GLEIST 64 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASGKYP 122 + + E GS + T + D A++G +F ++ LTR G F + ++G L + +G Sbjct: 65 KDMISEQGSLMHTASNTDLAIQGKGFFIVKGRDNVNCLTRAGDFHINNEGFLENVAGGVL 124 Query: 123 VLDM 126 + Sbjct: 125 LGYP 128 Score = 65.7 bits (158), Expect = 6e-09, Method: Composition-based stats. Identities = 23/208 (11%), Positives = 54/208 (25%), Gaps = 4/208 (1%) Query: 32 VGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA 91 G + +V + N ++ + + + G ++ + + + Sbjct: 215 TGDKKWEVSIFRQDQSTNNSFPYNVAPLNTVEVSFDPVTGYLANSSHKAISFNDNTSGID 274 Query: 92 LESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQK 151 + I T S ++ D + Sbjct: 275 QQITIDISKTTQLAGGFIPQKSEINGHAPGKPKDFSVSKDGYVDIIYDDGTRVPIYRLAI 334 Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMG 211 V + L D + R++ IS P + G LE +N + E+ Sbjct: 335 ATVPSEDNLKLFDGNTYLPTRDSGDISIGFPGH----NQHGEIFSGALETANVDIASELT 390 Query: 212 QMIHLTQKFNSITTLIDENEKSMLEAIR 239 ++I + + + + M I Sbjct: 391 ELIEAQRNYAVNSKVFQTGSDFMDILIS 418 >gi|54308097|ref|YP_129117.1| flagellar hook protein FlgE [Photobacterium profundum SS9] gi|46912523|emb|CAG19315.1| putative flagellar hook protein FlgE [Photobacterium profundum SS9] Length = 435 Score = 83.0 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 35/151 (23%), Positives = 64/151 (42%), Gaps = 6/151 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61 FNI L+ A ++ L+T ++N++N +T GF+ + +F +V + N V + Sbjct: 2 GFNISLSGIGASQKDLNTTSNNIANANTYGFKESRAEFGDVYSSSIFSNAKTTTGGGVQT 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALE----SPRGIILTRDGRFKVTDDGSLVSA 117 GS I T +D + G +FA+ P+ LTR+G F + D +V++ Sbjct: 62 SVVAQQFHEGSSIYTNNPMDLRISGSGFFAVADDKLQPQNSNLTRNGAFHLNKDNQIVNS 121 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEI 148 G+Y + E + + Sbjct: 122 EGQYLLGYGVDQETDQVTSYEPQAMKVPDQF 152 Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 38/101 (37%), Gaps = 6/101 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISP-----NIPPTPLEDLSGVTVKRGFLED 201 + + + +G+ V QG V + + + + +VK G LE Sbjct: 336 YSNGENVTLGRVGMVRVANEQGLVSKGGTQWATGQDSGAAIWGEASQGAFGSVKSGTLEQ 395 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 SN + E+ +I + F + + ++ + + + I I Sbjct: 396 SNIDMTQELVDLITAQRNFQANSRALE-VDNQLQQTILQIR 435 >gi|114569239|ref|YP_755919.1| hypothetical protein Mmar10_0688 [Maricaulis maris MCS10] gi|114339701|gb|ABI64981.1| protein of unknown function DUF1078 domain protein [Maricaulis maris MCS10] Length = 461 Score = 83.0 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 36/199 (18%), Positives = 77/199 (38%), Gaps = 6/199 (3%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 ++ G + ++ L++++DN++N +TVG++ F+ + + + + V S Sbjct: 4 NSALLAGASGLISNSNALASISDNIANVNTVGYKRASAVFTPLYDSDSSTKGYSAAGVNS 63 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESP------RGIILTRDGRFKVTDDGSLV 115 E G + + D A+ G +F + + TR GRF +G L Sbjct: 64 VARLAIGESGLLTAGSSPTDLAISGRGFFVVRDDANVNSSDPVSFTRAGRFTPDTNGYLR 123 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 + +GKY + +PQ N E +S G + ++ + + ++ Sbjct: 124 NDAGKYLSGWPVAADGSVPQNPSDLNALETINLSSIGGAAEATTIMGINANLQQSQAISA 183 Query: 176 GISPNIPPTPLEDLSGVTV 194 + ++S TV Sbjct: 184 DEATYDATASATNMSSGTV 202 Score = 76.1 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 32/90 (35%), Gaps = 5/90 (5%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLEDSNANSMYE 209 I + + + G + + P S + LE SN + E Sbjct: 369 IYQIPVATFVNPDGLEAQSGGTFTVTPESGAYTLNPPGLGSSGQIAASTLESSNVDLANE 428 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +I + +++ + +I ++ + EAIR Sbjct: 429 FTSLITTQRAYSASSKIITTADEMLDEAIR 458 >gi|84388091|ref|ZP_00990987.1| flagellar hook protein [Vibrio splendidus 12B01] gi|84377158|gb|EAP94028.1| flagellar hook protein [Vibrio splendidus 12B01] Length = 434 Score = 83.0 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 30/207 (14%), Positives = 68/207 (32%), Gaps = 13/207 (6%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGK 63 + L+ A + L+T ++N++N +T GF+ + +F +V + N + + Sbjct: 3 YVALSGLSAAQLDLNTTSNNIANANTFGFKESRAEFGDVYSSSLFTNAKTTAGGGAQASQ 62 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWF----ALESPRGIILTRDGRFKVTDDGSLVSASG 119 GS I T +D + G +F P LTR+G F + D +V+A+ Sbjct: 63 VAQQFHEGSSIYTNNPMDLRVSGTGFFAVSKDRMVPEINELTRNGAFHLNKDNYMVTAND 122 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF-------VRR 172 ++ + + E + + ++ + + Sbjct: 123 EFLLGYDVDPNSGEVLSYAPKPLDIPAEFGKPKQTENIEVGVNLPANGDLKDPAAFNYQD 182 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFL 199 ++ + +L Sbjct: 183 ADTYNRATSSTVYDSMGQSYKLTTYYL 209 Score = 67.6 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 19/145 (13%), Positives = 48/145 (33%), Gaps = 6/145 (4%) Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ-KGKVIATMG 159 T+ +F + + + + + + D G S + ++ +G Sbjct: 288 TQVLKFGLDSSTQFAAPFELTKFDEDGATTGFLTKIDFDEYGSVLGTYSNGENVMLGRVG 347 Query: 160 LYSVDMSQGFVRRENSGISPNIP-----PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMI 214 L V QG ++ + S ++ G LE SN + E+ +I Sbjct: 348 LVRVPNEQGLDKKGGTQWDSTNDSGSKIWGESNKGSFGSINNGSLEQSNIDMTQELVDLI 407 Query: 215 HLTQKFNSITTLIDENEKSMLEAIR 239 + F + + ++ + + ++ Sbjct: 408 SAQRNFQANSRSLEVHNQLQQNILQ 432 >gi|238924161|ref|YP_002937677.1| flagellar hook protein [Eubacterium rectale ATCC 33656] gi|238875836|gb|ACR75543.1| flagellar hook protein [Eubacterium rectale ATCC 33656] Length = 477 Score = 83.0 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 28/145 (19%), Positives = 50/145 (34%), Gaps = 18/145 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M S ++ + R+ + +N++N +T F+ V+FSE++ + Sbjct: 1 MMRSLYSAVSGLKTHQTRMDVIGNNIANVNTEAFKASSVRFSEIMYQTTSGASAGNGAAG 60 Query: 61 SG---------------KEYLSKEVGSFISTGTELDFALEGD---AWFALESPRGIILTR 102 +G GS +TG D L +F + + TR Sbjct: 61 TGGKNAKQIGLGVKSGATAVNITGAGSAETTGNPFDLRLNDKNATNFFVVSDGTNRLFTR 120 Query: 103 DGRFKVTDDGSLVSASGKYPVLDMA 127 G F V +G L +S Y + Sbjct: 121 AGDFYVDGNGYLCMSSTGYTLQGWQ 145 Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 22/209 (10%), Positives = 60/209 (28%), Gaps = 12/209 (5%) Query: 38 KVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG 97 + F + S ++ + +S D ++ G + S Sbjct: 271 QTIFEDASLVFDQSEGTFTSISSANSPAAKT-INLNLSVLNTQDASINGSNF----SNIE 325 Query: 98 IILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA- 156 + ++ + ++ +G + + G V+ Sbjct: 326 VDFSKSMNYNNNGTSTIGGMNGDLQGDGKGKALGALTGITVSDDGKIYGSYDNGNTVLLC 385 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLE------DLSGVTVKRGFLEDSNANSMYEM 210 + + + G + ++ + + G ++ G LE SN + + Sbjct: 386 QIAVAQFANASGLEKIGDNCYQSTLNSGEFDGIGVEISADGGSISSGELEMSNVDLSSQF 445 Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIR 239 MI + F + + +I ++ + E I Sbjct: 446 TDMIVTQRGFQANSRVITTSDTLLEELIN 474 >gi|268680906|ref|YP_003305337.1| fagellar hook-basal body protein [Sulfurospirillum deleyianum DSM 6946] gi|268618937|gb|ACZ13302.1| fagellar hook-basal body protein [Sulfurospirillum deleyianum DSM 6946] Length = 567 Score = 82.6 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 29/128 (22%), Positives = 51/128 (39%), Gaps = 6/128 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV-----GAIKNDIDQK 55 M +S G++ + + + +N+SN +T GF+ + S + G + + Sbjct: 1 MNSSLYNGVSGIKTSQFYIDVIGNNISNVNTNGFKGSTPEVSSLFSSILVGTYNSYSNGV 60 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSL 114 S L G +T D AL + WF ++ + TR G F + +G+L Sbjct: 61 GMGAQSFNTALDMSQGILENTDNTFDLALGSEGWFGVQGADGNTYYTRAGSFSLDAEGNL 120 Query: 115 VSASGKYP 122 V G Y Sbjct: 121 VDGDGNYL 128 Score = 61.4 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 36/93 (38%), Gaps = 8/93 (8%) Query: 155 IATMGLYSVDMSQGFV--------RRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANS 206 +A + +Y QG + NSG + E G V LE SN + Sbjct: 472 VAKIAVYHFQNDQGLMAESSNLFSESSNSGKAFFYADESGESFLGSKVYSHKLEGSNVSL 531 Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + ++I + + F++ I +++ + AI Sbjct: 532 ATALTELIIVQKAFDASAKSITTSDELLKNAIN 564 >gi|237799206|ref|ZP_04587667.1| flagellar hook protein FlgE [Pseudomonas syringae pv. oryzae str. 1_6] gi|237806225|ref|ZP_04592929.1| flagellar hook protein FlgE [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022061|gb|EGI02118.1| flagellar hook protein FlgE [Pseudomonas syringae pv. oryzae str. 1_6] gi|331027338|gb|EGI07393.1| flagellar hook protein FlgE [Pseudomonas syringae pv. oryzae str. 1_6] Length = 442 Score = 82.6 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 34/134 (25%), Positives = 55/134 (41%), Gaps = 4/134 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI---DQKISFVA 60 SFNIGL+ A + L +N++N T GF++ + +F++ S V Sbjct: 2 SFNIGLSGLYAANKSLDVTGNNIANVATTGFKSSRTEFADQYAQSIRGTSGKSSVGSGVT 61 Query: 61 SGKEYLSKEVGS-FISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119 + GS T LD A+ GD +F L + + TR G F +G +V++SG Sbjct: 62 TAAVSQQFSQGSLTTGTANSLDLAINGDGFFMLSNNGEKLFTRAGAFHTDKEGYVVNSSG 121 Query: 120 KYPVLDMASVPIQI 133 + Sbjct: 122 MKLQGYNVDASGSV 135 Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 17/123 (13%), Positives = 33/123 (26%), Gaps = 5/123 (4%) Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 D + + + K +VI L S QG + + Sbjct: 318 QDQDGYATGQLSAMNVDSTGNLFATYTNGKSQVIGQTSLTSFANVQGLAQAGGTNWRETF 377 Query: 182 PPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + + + LE+SN + E+ +I + + I M Sbjct: 378 SSGVPVSGAPQSGTLGYITGQALEESNVDLTVELVNLIKAQSNYQANAKTISTQSTIMQT 437 Query: 237 AIR 239 I+ Sbjct: 438 TIQ 440 >gi|85058011|ref|YP_453713.1| flagellar hook protein FlgE [Sodalis glossinidius str. 'morsitans'] gi|84778531|dbj|BAE73308.1| flagellar hook protein FlgE [Sodalis glossinidius str. 'morsitans'] Length = 404 Score = 82.6 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 30/197 (15%), Positives = 69/197 (35%), Gaps = 6/197 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 F G++ A Q L + +N++N TVGF++ F+++ + +++ V Sbjct: 2 GFAQGVSGLNAAAQALDVIGNNIANAQTVGFKSSSASFADMFSESMIGLGVQLAGVQ--- 58 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ I+ ++ A+ G +F ++ I +R+G F+ G +V+ GKY Sbjct: 59 --QDFNDGTMIAGAGNINMAIAGSGFFRLADNGGKIYYSRNGEFERNKYGEIVNKQGKYL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ + +++ ++ S Sbjct: 117 TGYKATGTPLGNITVPDTPMPGAVSTEGSLGDNLPSNSEPPKVAEFDIKEPKSYNYSTQF 176 Query: 183 PTPLEDLSGVTVKRGFL 199 + +K ++ Sbjct: 177 TAYDSLGNPHNIKVYYI 193 Score = 72.6 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 37/98 (37%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLED 201 +Q+ ++IA + + S + G ++ + + S ++ LE Sbjct: 305 YSNQQTQLIAQVVMASFTNTGGLQPSGDNCWTETGASGAPLIGTSDTGSFGVIRGKMLEA 364 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ +M+ + + S I ++ + + Sbjct: 365 SNVDMSNELVKMMTQQRNYQSNAQTIKTQDQLLQTLVS 402 >gi|254496887|ref|ZP_05109735.1| flagellar hook protein FlgE [Legionella drancourtii LLAP12] gi|254353906|gb|EET12593.1| flagellar hook protein FlgE [Legionella drancourtii LLAP12] Length = 437 Score = 82.6 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 33/155 (21%), Positives = 65/155 (41%), Gaps = 2/155 (1%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV--VGAIKNDIDQKISFVASG 62 F+ G++ A L + +N++N+ TVGF+ + F ++ G + V Sbjct: 3 FDTGISGLQAASNNLDVIGNNIANSSTVGFKGSRANFGDIYSFGGYGSSGTTPGGGVMLT 62 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 S G+ ST LD A+ G+ +F L + +R G+F + +D + ++SG++ Sbjct: 63 SIQQSFASGTMTSTNNTLDLAISGNGFFILNNQGATSYSRAGQFTLNNDNYITNSSGQFL 122 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157 +A I V + +++T Sbjct: 123 TGYLADAAGNITGASGNIQVNMANLSPKATTLVST 157 Score = 59.1 bits (141), Expect = 5e-07, Method: Composition-based stats. Identities = 15/98 (15%), Positives = 29/98 (29%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLED 201 + + + + L + G N + S T+ G LE+ Sbjct: 338 YSNGQTLAMGQIQLANFADLNGLQNIGNVCWTATATSGQALIGTGGTGSFGTLLSGRLEE 397 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ +I + F + I + I Sbjct: 398 SNVDITSELVDLIGAQRDFQANAQTIRAGDTITQTIIN 435 >gi|188534170|ref|YP_001907967.1| flagellar hook protein FlgE [Erwinia tasmaniensis Et1/99] gi|188029212|emb|CAO97084.1| Flagellar biosynthesis, hook protein [Erwinia tasmaniensis Et1/99] Length = 402 Score = 82.6 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 29/232 (12%), Positives = 70/232 (30%), Gaps = 19/232 (8%) Query: 25 NMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFAL 84 N++++ T ++ F + + ++ A + S + GT + Sbjct: 171 NINDSTTYNAKSAMTTFDSL--GNAHTVNLYFVKTADNNWTVHPVDSSTGTAGTNTNLVF 228 Query: 85 EGDAWFALESPRGIIL--------TRDGRFKVTDDGSLVSASG----KYPVLDMASVPIQ 132 + + + + T ++ GSL +G P D Sbjct: 229 DANGQLTTPANGQVSYSMGALNGSTAQPGMTISLAGSLQQNNGKSTFGNPTQDGYKPGEL 288 Query: 133 IPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----E 187 + +++ +V+ + L + +G ++ S Sbjct: 289 TSYQINDDGTLVGSYSNEQTQVLGQIVLSNFANPEGLKSEGDNVWSATSSSGQALTGTAG 348 Query: 188 DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + T+ G LE SN + E+ MI + + S I ++ + + Sbjct: 349 TGNLGTLTAGALESSNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400 Score = 71.1 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 28/133 (21%), Positives = 60/133 (45%), Gaps = 6/133 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 F+ ++ A L + +N+SN+ T GF++ V F+++ K + K++ V Sbjct: 2 GFSQAVSGLNAASSNLDVIGNNISNSATAGFKSSTVAFADMFAGSKVGLGTKVASV---- 57 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +T LD A+ +F + ++ G+ +R+G+F + + ++V+ G Sbjct: 58 -VQDFGDGTTTTTSRGLDVAISSAGFFRMADANGGVFYSRNGQFTLDAERNIVNMQGLKL 116 Query: 123 VLDMASVPIQIPQ 135 A+ Q Sbjct: 117 TGYPATGTPPTVQ 129 >gi|94263193|ref|ZP_01287010.1| conserved hypothetical protein [delta proteobacterium MLMS-1] gi|93456411|gb|EAT06531.1| conserved hypothetical protein [delta proteobacterium MLMS-1] Length = 619 Score = 82.6 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 26/205 (12%), Positives = 66/205 (32%), Gaps = 10/205 (4%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 G++ ++ ++ + DN++N +T +++ + F ++ + + + + Sbjct: 5 NMIFNGVSGLNSMSGNMAVMGDNIANVNTTSYKSSQASFQNILTSSQERFGEIGNGSQVA 64 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESP--RGIILTRDGRF-------KVTDDGS 113 + G +T D A+ G +F + +P ++ TRDG+F + Sbjct: 65 AITKNFRPGDLETTNQSTDMAISGKGFFMVNNPLADEMLYTRDGQFKLEKSAITPEGYYN 124 Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRE 173 L + +G + +I + +A Sbjct: 125 LATPAGHLVQGRNLAANGGADNLGDILIQEVSDPRATGNVSLAMNLQSKPGREDA-QPLH 183 Query: 174 NSGISPNIPPTPLEDLSGVTVKRGF 198 +S P + T+ + F Sbjct: 184 SSWDGAAAEPLAADRYDYRTIMQAF 208 Score = 68.0 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 20/145 (13%), Positives = 40/145 (27%), Gaps = 6/145 (4%) Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-IATMG 159 +RD + + +AS + + G S + A + Sbjct: 473 SRDNDLQPLRTTNYATASSTLSQQQDGFGEGYLQDISINPDGTMVGRYSNQQSFEQAQVM 532 Query: 160 LYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMI 214 L +G ++ + S V LE SN + E +I Sbjct: 533 LADFADYRGLEPTSHNAYKATAMAGEPTIGVAGEGSFGKVLGNTLEGSNVDLGREFSDLI 592 Query: 215 HLTQKFNSITTLIDENEKSMLEAIR 239 + F + + I ++ +R Sbjct: 593 MTQRIFQANSKSITTADEVFDTLMR 617 >gi|294140184|ref|YP_003556162.1| flagellar hook protein FlgE [Shewanella violacea DSS12] gi|293326653|dbj|BAJ01384.1| flagellar hook protein FlgE [Shewanella violacea DSS12] Length = 454 Score = 82.6 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 36/125 (28%), Positives = 57/125 (45%), Gaps = 5/125 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61 SFNI L+ A ++ L+T A+N++N +++GF+ + +F++V N V + Sbjct: 2 SFNIALSGIAAAQKDLNTTANNIANVNSIGFKESRAEFADVYANSIFANSKTAVGGGVTT 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESP---RGIILTRDGRFKVTDDGSLVSAS 118 + GS T LD A+ G +F S + TR G FKV LV + Sbjct: 62 SQVAQQFHQGSLQFTNNALDMAINGGGFFVTSSELEAKDHSFTRAGAFKVNSADYLVDSQ 121 Query: 119 GKYPV 123 G Y Sbjct: 122 GNYLQ 126 Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 15/137 (10%), Positives = 40/137 (29%), Gaps = 5/137 (3%) Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 + D +V + + + +A + L Q Sbjct: 316 NNPTQYASTFEVTELNQDGTTVGRLTNVEVGADGLINASYSNGSTVALARVALARFANEQ 375 Query: 168 GFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222 G + N+ ++ + +++ LE SN + E+ +I + F + Sbjct: 376 GLTQVGNTSWRASLDSGLALAGEANSGTFGSIRSSALEQSNVDLTTELVDLISAQRNFQA 435 Query: 223 ITTLIDENEKSMLEAIR 239 + ++ N ++ Sbjct: 436 NSRTLEVNNTLQQTILQ 452 >gi|126441055|ref|YP_001057322.1| flagellar hook protein FlgE [Burkholderia pseudomallei 668] gi|126220548|gb|ABN84054.1| flagellar basal body protein FlaE [Burkholderia pseudomallei 668] Length = 413 Score = 82.6 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 32/201 (15%), Positives = 64/201 (31%), Gaps = 6/201 (2%) Query: 8 GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVASGKEY 65 GL+ L + +N++N +TVGF+ +FS++ + Sbjct: 6 GLSGLAGASSDLDVIGNNIANANTVGFKGSTAQFSDMYANSVASAVNNPIGIGTMLASVQ 65 Query: 66 LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125 G+ S+ + L+ A+ G+ +F + + +RDG F+ +G +V++ G + Sbjct: 66 QQFSQGTITSSTSSLNVAINGNGFFQMSNNGVTTYSRDGTFQRDKNGYIVNSQGLNLMGY 125 Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185 A+ I + I+ T + P Sbjct: 126 AANANGVINTAATVPLQAPTTNIAPTATTKITGQFNLNSQDAVPATTPFNYTDPTSYNYT 185 Query: 186 LEDLSGVTVKRGFLEDSNANS 206 T+ N N Sbjct: 186 TSVQVFDTLGGSQ----NVNL 202 Score = 64.1 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 12/98 (12%), Positives = 34/98 (34%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLED 201 + + + + L + + G V N+ + + + T++ LE+ Sbjct: 315 YSNGQTSTLGQIVLANFNNPNGLVNVGNNQYVESAASGVPQISAPGSTNHGTLQGSALEN 374 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + ++ ++I + + + I + I Sbjct: 375 SNVDLTSQLVKLITAQRNYQANAQTIKTQQTVDQTLIN 412 >gi|254175270|ref|ZP_04881931.1| flagellar hook protein FlgE [Burkholderia mallei ATCC 10399] gi|160696315|gb|EDP86285.1| flagellar hook protein FlgE [Burkholderia mallei ATCC 10399] Length = 413 Score = 82.6 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 32/201 (15%), Positives = 64/201 (31%), Gaps = 6/201 (2%) Query: 8 GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVASGKEY 65 GL+ L + +N++N +TVGF+ +FS++ + Sbjct: 6 GLSGLAGASSDLDVIGNNIANANTVGFKGSTAQFSDMYANSVASAVNNPIGIGTMLASVQ 65 Query: 66 LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125 G+ S+ + L+ A+ G+ +F + + +RDG F+ +G +V++ G + Sbjct: 66 QQFSQGTITSSTSSLNVAINGNGFFQMSNNGVTTYSRDGMFQRDKNGYIVNSQGLNLMGY 125 Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185 A+ I + I+ T + P Sbjct: 126 AANANGVINTAATVPLQAPTTNIAPTATTKITGQFNLNSQDAVPATTPFNYTDPTSYNYT 185 Query: 186 LEDLSGVTVKRGFLEDSNANS 206 T+ N N Sbjct: 186 TSVQVFDTLGGSQ----NVNL 202 Score = 64.1 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 12/98 (12%), Positives = 34/98 (34%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLED 201 + + + + L + + G V N+ + + + T++ LE+ Sbjct: 315 YSNGQTSTLGQIVLANFNNPNGLVNVGNNQYVESAASGVPQISAPGSTNHGTLQGSALEN 374 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + ++ ++I + + + I + I Sbjct: 375 SNVDLTSQLVKLITAQRNYQANAQTIKTQQTVDQTLIN 412 >gi|149908759|ref|ZP_01897420.1| flagellar hook protein [Moritella sp. PE36] gi|149808301|gb|EDM68240.1| flagellar hook protein [Moritella sp. PE36] Length = 437 Score = 82.6 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 27/130 (20%), Positives = 54/130 (41%), Gaps = 5/130 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 S++IGL+ + ++L+ ++ N++N +T GF++ + +FS V + Sbjct: 2 SYSIGLSGLRSTNEQLNVISQNIANVNTSGFKSGRAEFSSVYS-----GGSAGGVEVAAI 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPV 123 G ++TG +D A+ G +F L + TR G F + ++SG Sbjct: 57 SSNFDRDGDVVNTGRSMDLAISGRGFFVLNNGGETSYTRAGSFVRNASNYIETSSGARLQ 116 Query: 124 LDMASVPIQI 133 + Sbjct: 117 GYPVDANGAL 126 Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 19/142 (13%), Positives = 42/142 (29%), Gaps = 9/142 (6%) Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162 +S + I+I ++ V G+ +GKVI + Sbjct: 298 MTNMSQNAASFSLSRNETNGYGAGDLKTIRIDDDGSLYGVYTNGQDKLQGKVILA----N 353 Query: 163 VDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217 G + +N+ + + ++ G E SN + E+ ++ Sbjct: 354 FANPNGLRQGDNTTWGQSFASGAPTVGLPSSGTLGSLTSGAYEGSNVDLTGELVSLMTAQ 413 Query: 218 QKFNSITTLIDENEKSMLEAIR 239 + + + + I EK Sbjct: 414 RNYQANSKTISAAEKMTQVLFN 435 >gi|325291962|ref|YP_004277826.1| Flagellar hook protein FlgE [Agrobacterium sp. H13-3] gi|325059815|gb|ADY63506.1| Flagellar hook protein FlgE [Agrobacterium sp. H13-3] Length = 426 Score = 82.6 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 34/191 (17%), Positives = 64/191 (33%), Gaps = 2/191 (1%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 G++ A +L TV DN++N T G++ FS +V + V S Sbjct: 7 MRTGVSGMNAQANKLGTVGDNIANASTTGYKRASTSFSSLVLPSSS-GSYASGGVQSNVR 65 Query: 65 YLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASGKYPV 123 Y E G+ T + D A++G+ +F ++ G TR G F +G L +A+G + Sbjct: 66 YSISEQGNLSYTTSSTDLAIQGNGFFVVQDGGGTPYLTRAGSFVKNAEGYLENAAGFQLM 125 Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183 + + + + +G P+ Sbjct: 126 GYPYGANAPAAVVNGFTGLEAVNVNNFGLTASPSTQGSFPANLNRDEAAVAAGSRPSDNL 185 Query: 184 TPLEDLSGVTV 194 + ++ Sbjct: 186 ATSTIGNKTSL 196 Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 16/125 (12%), Positives = 37/125 (29%), Gaps = 5/125 (4%) Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 +L+ + V + I + + +V + + P Sbjct: 299 GTAILNGNGPSQIKDVEIGKDGVVTAVYQDGGRRNIYQLAVATVPSVDNLSPQNGNVYLP 358 Query: 180 NIPPTP-----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 + + S +++G LE SN + E+ MI + + + + + M Sbjct: 359 SNESGVVTIGFPQTGSFGYIQKGALEGSNVDIASELTDMIESQRIYTANSKVFQTGSDLM 418 Query: 235 LEAIR 239 I Sbjct: 419 DVLIN 423 >gi|320107029|ref|YP_004182619.1| flagellar hook-basal body protein [Terriglobus saanensis SP1PR4] gi|319925550|gb|ADV82625.1| flagellar hook-basal body protein [Terriglobus saanensis SP1PR4] Length = 408 Score = 82.6 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 30/128 (23%), Positives = 56/128 (43%), Gaps = 5/128 (3%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----KNDIDQKI 56 SF+I L+ A L T+ +N++N ++V ++ V FS++ N Q Sbjct: 1 MPSFSIALSGLKADSVALDTIGNNLANMNSVAYKKQNVNFSDLFYQTIGVSGANTPQQVG 60 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVS 116 G F G+ A+ GD +F + + LTR+G F++ G+L++ Sbjct: 61 LGTQVSDISTDYTQGGFNPGGSSTQMAINGDGFFVVSNGGVQELTRNGDFQLDSSGNLIT 120 Query: 117 ASGKYPVL 124 + G+ + Sbjct: 121 SDGQSVMG 128 Score = 62.6 bits (150), Expect = 5e-08, Method: Composition-based stats. Identities = 18/129 (13%), Positives = 38/129 (29%), Gaps = 5/129 (3%) Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174 V+AS + + + + +V+ + L +V QG R N Sbjct: 276 VTASSANFAANGSPSGKYQSFSVDSTGTITAQFSNGNTEVLGQVALATVSNEQGLTRMGN 335 Query: 175 SGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 + ++ LE SN + E +I + F + + + Sbjct: 336 DLYVASRASGSPNVGVAGVGGRGDIEGNALELSNVDISTEFANLIVAQRAFEANSKTVTT 395 Query: 230 NEKSMLEAI 238 + + I Sbjct: 396 FDTVTQDTI 404 >gi|90411005|ref|ZP_01219019.1| flagellar hook protein [Photobacterium profundum 3TCK] gi|90328218|gb|EAS44529.1| flagellar hook protein [Photobacterium profundum 3TCK] Length = 435 Score = 82.6 bits (202), Expect = 5e-14, Method: Composition-based stats. Identities = 34/148 (22%), Positives = 63/148 (42%), Gaps = 6/148 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61 FNI L+ A ++ L+T ++N++N +T GF+ + +F +V + N V + Sbjct: 2 GFNISLSGIGASQKDLNTTSNNIANANTYGFKESRAEFGDVYSSSIFSNAKTTTGGGVQT 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALE----SPRGIILTRDGRFKVTDDGSLVSA 117 GS I T +D + G +FA+ P+ LTR+G F + D +V++ Sbjct: 62 SVVAQQFHEGSSIYTNNPMDLRISGSGFFAVADDKLQPQNNNLTRNGAFHLNKDNQVVNS 121 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEK 145 G++ + E + Sbjct: 122 EGQFLLGYGVDQETDQVTSYEPQAMKVP 149 Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 38/101 (37%), Gaps = 6/101 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISP-----NIPPTPLEDLSGVTVKRGFLED 201 + + + +G+ V QG V + + + + +VK G LE Sbjct: 336 YSNGENVTLGRVGMVRVANEQGLVSKGGTQWATGQDSGAAIWGEASQGAFGSVKSGTLEQ 395 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 SN + E+ +I + F + + ++ + + + I I Sbjct: 396 SNIDMTQELVDLITAQRNFQANSRALE-VDNQLQQTILQIR 435 >gi|124516303|gb|EAY57811.1| probable flagellar hook protein FlgE [Leptospirillum rubarum] Length = 457 Score = 82.6 bits (202), Expect = 5e-14, Method: Composition-based stats. Identities = 29/130 (22%), Positives = 53/130 (40%), Gaps = 7/130 (5%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND------IDQK 55 +S + + A+ +S + +N++N +TVGF+ + F+ V G Q Sbjct: 4 LSSMYVATSGLNAMGTDMSVIGNNITNLNTVGFKQGRAVFANVYGQTMTGRSNTVNTSQP 63 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSL 114 S V GS ++ LD A++G+ + + S G TR+G + G + Sbjct: 64 GSGVYVDAIQQEFTQGSVQASTNALDLAIQGNGFLTVRSKDGQKFYTRNGELALDKTGRI 123 Query: 115 VSASGKYPVL 124 V S + Sbjct: 124 VDTSNRALQG 133 Score = 60.3 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 13/96 (13%), Positives = 30/96 (31%), Gaps = 5/96 (5%) Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANS 206 KV+ + + S + G + +I + LE S + Sbjct: 362 QKVLGVVAIASFNNPGGLASVGGNAYIESIASGVPNFGRPGQGGRGALLSNSLELSTTDL 421 Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 +M MI + + + ++I + + + I Sbjct: 422 GRQMVDMITAERGYQASASIIATDNTILNTLLTRIG 457 >gi|167576662|ref|ZP_02369536.1| flagellar hook protein flgE [Burkholderia thailandensis TXDOH] Length = 395 Score = 82.6 bits (202), Expect = 5e-14, Method: Composition-based stats. Identities = 37/196 (18%), Positives = 74/196 (37%), Gaps = 8/196 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SFNI L+ A+ +L+T++ N++N++T GF+ + F+ +V + + S S Sbjct: 2 SFNIALSGINAINSQLNTISHNIANSNTYGFKAGRANFATMVAGTQANGTYIGSTTQSVG 61 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASGKYP 122 + TG LD A++G+ +F + + TR G FK DG +V G Sbjct: 62 TRGGF-----LPTGRALDGAIDGNGFFVTKDSDGSTLFTRVGYFKRDADGYIVD--GFRR 114 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + V + + F + +++ + ++ Sbjct: 115 RAQGYGASGAYGDIRVPTDTEPAKASDSLEYVGNLSADWDAPKNPTFDKDDDTSFNHSVA 174 Query: 183 PTPLEDLSGVTVKRGF 198 T + L + + Sbjct: 175 STVYDSLGRQHIVTQY 190 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 12/92 (13%), Positives = 33/92 (35%), Gaps = 5/92 (5%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYE 209 + ++ L + G ++ + + V G LE SNA+ E Sbjct: 304 VGSLALATFANQDGLTAVGDTAWRASAASGNPLIGSAGSGALGKVVAGSLELSNADVTKE 363 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 + M+ + + + + ++ + M ++ + Sbjct: 364 LVDMMSAQRNYQANSKVLSTENQMMQALMQAL 395 >gi|319409169|emb|CBI82813.1| Flagellar hook protein FlgE [Bartonella schoenbuchensis R1] Length = 403 Score = 82.6 bits (202), Expect = 5e-14, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 70/181 (38%), Gaps = 11/181 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M G++ A RLS VA+N++N +T+G++ V+FS V D Sbjct: 6 MMR---TGVSGMNAQGTRLSGVAENVANVNTIGYKRTDVQFSNYVIP-SGDYAYVPGGAR 61 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASG 119 S + G +TG D ++G+ +F + GI TR G F DG + + +G Sbjct: 62 SYVGHDISISGPARATGRMGDVMIDGNGFFRVADENGIEYLTRAGSFSRDKDGYVRNLAG 121 Query: 120 KYPVLDM------ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRE 173 Y + + P + + + K + + G + + + ++ Sbjct: 122 YYLLDEDGQRVQIKGGPTDLFGPEVTTKIDFKVNFDASAEALDVHGDIDPNDPESYNHKK 181 Query: 174 N 174 + Sbjct: 182 S 182 Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 15/98 (15%), Positives = 33/98 (33%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLED 201 + + +V+ +G+ +V + S N + G+LED Sbjct: 303 YTNHQMRVVGYVGMTTVTSPESLTVLSGSVFGTNSRTGGQMMGRPGDGVFGLLFSGYLED 362 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN E+ MI + + + + + + M + Sbjct: 363 SNVEMSDELTDMIEAQRNYTANSKVFQTGSELMDVIVN 400 >gi|291276999|ref|YP_003516771.1| flagellar hook protein FlgE [Helicobacter mustelae 12198] gi|290964193|emb|CBG40039.1| Putative flagellar hook protein, FlgE [Helicobacter mustelae 12198] Length = 600 Score = 82.6 bits (202), Expect = 5e-14, Method: Composition-based stats. Identities = 30/149 (20%), Positives = 55/149 (36%), Gaps = 21/149 (14%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------Q 54 M + + + L ++++N++N +T G+R +F ++ ++ Sbjct: 1 MNNTILNSYSGIKTHQFGLDSISNNIANVNTPGYREHIPEFKTLLSRNIASVNGSTVSSD 60 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA---------------LESPRGII 99 V+ +S + G + + + D A EG WF E + Sbjct: 61 SNYGVSVSSNAISTKSGDYKRSDGDFDMAYEGKGWFIVGKNSKGSLSINEDGYEGNQQNY 120 Query: 100 LTRDGRFKVTDDGSLVSASGKYPVLDMAS 128 TRDG F DG LV+A+G Y Sbjct: 121 FTRDGSFSRDSDGYLVNAAGYYVYGLDLG 149 Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 17/128 (13%), Positives = 39/128 (30%), Gaps = 3/128 (2%) Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171 G + +G + V + + ++G G + L + G + Sbjct: 473 GVSIDENGIIQLNFDNGVSTPMGRIGIAAFSNDQGLHKVGGNL---FELKQTTDNNGDNK 529 Query: 172 RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 + L V +LE SN + + +I + + ++ + + Sbjct: 530 ILSGAPILGWDGDGDGRLKFGRVMHKYLETSNTDVTSALTNLILMQRGYSMNAKALSTGD 589 Query: 232 KSMLEAIR 239 + EAI Sbjct: 590 DLIKEAIN 597 >gi|163750570|ref|ZP_02157808.1| flagellar hook protein [Shewanella benthica KT99] gi|161329725|gb|EDQ00714.1| flagellar hook protein [Shewanella benthica KT99] Length = 455 Score = 82.2 bits (201), Expect = 5e-14, Method: Composition-based stats. Identities = 36/125 (28%), Positives = 57/125 (45%), Gaps = 5/125 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61 SFNI L+ A ++ L+T A+N++N +++GF+ + +F++V N V + Sbjct: 2 SFNIALSGIAAAQKDLNTTANNIANVNSIGFKESRAEFADVYANSIFANGKTAVGGGVTT 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESP---RGIILTRDGRFKVTDDGSLVSAS 118 + GS T LD A+ G +F S + TR G FKV LV + Sbjct: 62 SQIAQQFHQGSLQFTNNALDLAINGGGFFVTSSELEAKDHSFTRAGAFKVNSADYLVDSQ 121 Query: 119 GKYPV 123 G Y Sbjct: 122 GNYLQ 126 Score = 62.6 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 14/137 (10%), Positives = 39/137 (28%), Gaps = 5/137 (3%) Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 + D +V + + + +A + L Q Sbjct: 317 NNPTQYASTFEVTELNQDGTTVGRLTNVEVGADGLINASYSNGTTVALARVALARFANEQ 376 Query: 168 GFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222 G + N+ + + +++ LE SN + ++ +I + F + Sbjct: 377 GLTQVGNTSWKASQDSGQALAGEANSGTFGSIRSSALEQSNVDLTTQLVNLISAQRNFQA 436 Query: 223 ITTLIDENEKSMLEAIR 239 + ++ N ++ Sbjct: 437 SSRTLEVNNTLQQTILQ 453 >gi|66046707|ref|YP_236548.1| flagellar hook protein FlgE [Pseudomonas syringae pv. syringae B728a] gi|63257414|gb|AAY38510.1| Flagellar basal body rod protein:Protein of unknown function DUF1078:Flagellar basal body FlaE [Pseudomonas syringae pv. syringae B728a] Length = 442 Score = 82.2 bits (201), Expect = 5e-14, Method: Composition-based stats. Identities = 29/134 (21%), Positives = 52/134 (38%), Gaps = 4/134 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS----FV 59 SFNIGL+ A + L +N++N T GF++ + +F++ S Sbjct: 2 SFNIGLSGLYAANKSLDVTGNNIANVATTGFKSSRAEFADQYAQSIRGTSGNTSVGSGVR 61 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119 + + T LD A+ GD +F + + + TR G F +G +V++S Sbjct: 62 TAAVSQQFSQGSLTTGTANSLDLAINGDGFFMMSNNGEKLYTRAGAFHTDKEGYVVNSSN 121 Query: 120 KYPVLDMASVPIQI 133 + Sbjct: 122 MKLQGYNVDANGAV 135 Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 30/98 (30%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLED 201 + K +VI L S QG + + + + + LE+ Sbjct: 343 YTNGKSQVIGQTSLTSFANVQGLAQAGGTNWRETFASGVPVSGAPQSGTLGYITGQALEE 402 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ +I + + I M I+ Sbjct: 403 SNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQTTIQ 440 >gi|330972413|gb|EGH72479.1| flagellar hook protein FlgE [Pseudomonas syringae pv. aceris str. M302273PT] Length = 442 Score = 82.2 bits (201), Expect = 5e-14, Method: Composition-based stats. Identities = 29/134 (21%), Positives = 52/134 (38%), Gaps = 4/134 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS----FV 59 SFNIGL+ A + L +N++N T GF++ + +F++ S Sbjct: 2 SFNIGLSGLYAANKSLDVTGNNIANVATTGFKSSRAEFADQYAQSIRGTSGNTSVGSGVT 61 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119 + + T LD A+ GD +F + + + TR G F +G +V++S Sbjct: 62 TAAVSQQFSQGSLTTGTANSLDLAINGDGFFMMSNNGEKLYTRAGAFHTDKEGYVVNSSN 121 Query: 120 KYPVLDMASVPIQI 133 + Sbjct: 122 MKLQGYNVDANGAV 135 Score = 63.0 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 30/98 (30%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLED 201 + K +VI L S QG + + + + + LE+ Sbjct: 343 YTNGKSQVIGQTSLTSFANVQGLAQAGGTNWRETFASGVPVSGAPQSGTLGYITGQALEE 402 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ +I + + I M I+ Sbjct: 403 SNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQTTIQ 440 >gi|330983289|gb|EGH81392.1| flagellar hook protein FlgE [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 183 Score = 82.2 bits (201), Expect = 5e-14, Method: Composition-based stats. Identities = 26/132 (19%), Positives = 51/132 (38%), Gaps = 4/132 (3%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA----IKNDIDQKISFVAS 61 NIGL+ A + L +N++N T GF++ + +F++ + + + Sbjct: 1 NIGLSGLYAANKSLDVTGNNIANVATTGFKSSRAEFADQYAQSIRGTSGNTNVGSGVRTA 60 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 + T LD A+ GD +F + + + TR G F +G +V++S Sbjct: 61 AVSQQFSQGSLTTGTANSLDLAINGDGFFMMSNNGEKLYTRAGAFHTDKEGYVVNSSNMK 120 Query: 122 PVLDMASVPIQI 133 + Sbjct: 121 LQGYNVDANGSV 132 >gi|163802603|ref|ZP_02196495.1| flagellar hook protein E [Vibrio sp. AND4] gi|159173686|gb|EDP58505.1| flagellar hook protein E [Vibrio sp. AND4] Length = 437 Score = 82.2 bits (201), Expect = 5e-14, Method: Composition-based stats. Identities = 28/171 (16%), Positives = 64/171 (37%), Gaps = 6/171 (3%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGK 63 + L+ + + L+T ++N++N +T GF+ + +F +V N + + Sbjct: 3 YVSLSGLSSAQLDLNTTSNNIANANTYGFKESRAEFGDVYSNSLFSNAKTTPGGGAQASQ 62 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWF----ALESPRGIILTRDGRFKVTDDGSLVSASG 119 GS I T +D + G +F +P+ +TR+G F + D +V+A+ Sbjct: 63 VAQQFHEGSSIYTNNPMDLRISGTGFFSVAKERLTPQQNEMTRNGAFHLNKDNYMVTAND 122 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170 ++ + E + E + + ++ + Sbjct: 123 EFLLGYQVDPDSGEVASYEPQAINIPAEFGKPKQTENIEVGVNLPANADLK 173 Score = 65.3 bits (157), Expect = 7e-09, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 34/98 (34%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP-----PTPLEDLSGVTVKRGFLED 201 + + + + L V QG ++ + S T+ G LE Sbjct: 338 YSNGENVTLGRVALVRVPNEQGLDKKGGTQWDSTQNSGAKVWGESNKGSFGTISNGTLEQ 397 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ +I + F + + ++ + + ++ Sbjct: 398 SNIDMTQELVDLISAQRNFQANSRALEVDNQLQQNILQ 435 >gi|291276324|ref|YP_003516096.1| flagellar hook subunit protein [Helicobacter mustelae 12198] gi|290963518|emb|CBG39349.1| flagellar hook subunit protein [Helicobacter mustelae 12198] Length = 705 Score = 82.2 bits (201), Expect = 6e-14, Method: Composition-based stats. Identities = 34/197 (17%), Positives = 60/197 (30%), Gaps = 15/197 (7%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-------------KNDIDQKISF 58 A + L ++N++N +T GF+ + F +++ + Sbjct: 1 MQAHQVALDVESNNIANVNTTGFKYSRASFVDMISQTKLIATSPHKGGLGGQNDVSVGLG 60 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRFKVTDDGSLVS 116 V GS +T + D A+EGD +F + + TRDG F +G+LV+ Sbjct: 61 VNVNSTTKVFSQGSTQNTDVKTDLAIEGDGFFIISPDRGKTQNFTRDGEFLFDANGNLVT 120 Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 G M + E + I + S R N Sbjct: 121 NGGYVVQGWMKDDLRNAEKISEDDFFRVDTTKPIQNIQIDPAMMMPARASSNISLRANLN 180 Query: 177 ISPNIPPTPLEDLSGVT 193 ++ T Sbjct: 181 AGRHVDQVANVFALDST 197 Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 16/128 (12%), Positives = 43/128 (33%), Gaps = 5/128 (3%) Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + + + + + G + K +A + L + + G + Sbjct: 575 SETYAISQNGYQAGSLVDVRFDSNGSLLGGFSNGKSMALAQVALANFANNTGLQAIGGNV 634 Query: 177 ISPNIPPTPLEDLSGVTVKRGF-----LEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 S + + T +RG LE SN + + Q+I + + F + + + ++ Sbjct: 635 FSTSGNSGDPIIGAANTGRRGSVNGSKLEMSNVDLSRSLTQLIVVQRGFQANSKAVTTSD 694 Query: 232 KSMLEAIR 239 + + + Sbjct: 695 QILNTLLS 702 >gi|83719411|ref|YP_440801.1| flagellar hook protein FlgE [Burkholderia thailandensis E264] gi|167617585|ref|ZP_02386216.1| flagellar hook protein FlgE [Burkholderia thailandensis Bt4] gi|257140548|ref|ZP_05588810.1| flagellar hook protein FlgE [Burkholderia thailandensis E264] gi|83653236|gb|ABC37299.1| flagellar hook protein FlgE [Burkholderia thailandensis E264] Length = 413 Score = 82.2 bits (201), Expect = 6e-14, Method: Composition-based stats. Identities = 28/189 (14%), Positives = 61/189 (32%), Gaps = 2/189 (1%) Query: 8 GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVASGKEY 65 GL+ L + +N++N +TVGF+ +FS++ + Sbjct: 6 GLSGLAGASSDLDVIGNNIANANTVGFKGSTAQFSDMYANSVASAVNNPIGIGTMLASVQ 65 Query: 66 LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125 G+ S+ + L+ A+ G+ +F + + + +RDG F+ +G +V++ G + Sbjct: 66 QQFSQGTITSSTSSLNVAINGNGFFQMSNNGVLTYSRDGTFQRDKNGYIVNSQGLNLMGY 125 Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185 A I + I+ T + Sbjct: 126 QADKNGVINPAQTVPLQAPTNNIAPTATTKITGQFNLNSQDTVPTNTPFNYTDSTTYNFQ 185 Query: 186 LEDLSGVTV 194 ++ Sbjct: 186 TAVQVYDSL 194 Score = 65.7 bits (158), Expect = 5e-09, Method: Composition-based stats. Identities = 26/212 (12%), Positives = 58/212 (27%), Gaps = 9/212 (4%) Query: 34 FRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE 93 F E +KN + V K G+ G F++ Sbjct: 204 FVKSAAGTWEAYAGVKNQTPTDLGTVTFDTSGAIKSTTLP---GSTTPTTTLGQFQFSIP 260 Query: 94 SPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ-KG 152 + G + + +T G + + + G S + Sbjct: 261 NTDGSATPQALKLDLTGTTQYGGKDGVTNLAQDGFASGTLTTFSIGNDGKVTGNYSNGQT 320 Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSM 207 + + L + + G V N+ + + T++ LE+SN + Sbjct: 321 ATLGQIVLANFNNPNGLVNVGNNQYVETAASGVPQISAPGSTNHGTLQGSALENSNVDLT 380 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 ++ ++I + + + I + I Sbjct: 381 SQLVKLITAQRNYQANAQTIKTQQTVDQTLIN 412 >gi|313681187|ref|YP_004058925.1| flagellar hook-basal body protein [Sulfuricurvum kujiense DSM 16994] gi|313154047|gb|ADR32725.1| flagellar hook-basal body protein [Sulfuricurvum kujiense DSM 16994] Length = 445 Score = 82.2 bits (201), Expect = 6e-14, Method: Composition-based stats. Identities = 40/199 (20%), Positives = 70/199 (35%), Gaps = 17/199 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA------IKNDIDQ 54 M + G++ A + L +ADN++NT+TVGFR +F+ + D+ Sbjct: 1 MTQGYYTGISGIQANQYGLDVIADNLANTNTVGFRGSSTEFASLFSEKLVSSGSAPTYDE 60 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDD--- 111 + ++ + GS ++T D A+ G+ WF + S + TR G F + + Sbjct: 61 IGAGTRLQATTMNTQNGSLLNTDRFNDLAINGNGWFGVVSGQDRYFTRAGNFVLDEYQKT 120 Query: 112 --------GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 G L + G Y M + Q + + K + Sbjct: 121 DGAANSSVGRLTTTEGMYVTGTMLNNFAYDSQYNYSAKSDVTDTGAFKITASLNTVPLTD 180 Query: 164 DMSQGFVRRENSGISPNIP 182 QG + P P Sbjct: 181 ANEQGPIELPTRLAYPTEP 199 Score = 66.4 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 20/97 (20%), Positives = 38/97 (39%), Gaps = 8/97 (8%) Query: 151 KGKVIATMGLYSVDMSQGFVRR--------ENSGISPNIPPTPLEDLSGVTVKRGFLEDS 202 K I + +Y QG R +NSG E ++G T+ G LE+S Sbjct: 346 KQSTIGRIAVYHFQNDQGLTRSGSTLFSQSDNSGNPMFWTDANGEAVTGTTISSGHLENS 405 Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 N + MI + + + + + ++ + +A+ Sbjct: 406 NVRMEVGLTDMIVMQRAYQANAKTVTTVDEMIQKALS 442 >gi|323174793|gb|EFZ60408.1| flagellar basal-body rod protein flgG domain protein [Escherichia coli LT-68] Length = 79 Score = 82.2 bits (201), Expect = 6e-14, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 24/56 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56 M +S I A + + +A+N++N T GF+ + F +++ + Sbjct: 1 MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQS 56 >gi|319898656|ref|YP_004158749.1| flagellar hook protein FlgE [Bartonella clarridgeiae 73] gi|319402620|emb|CBI76165.1| Flagellar hook protein FlgE [Bartonella clarridgeiae 73] Length = 402 Score = 82.2 bits (201), Expect = 6e-14, Method: Composition-based stats. Identities = 44/195 (22%), Positives = 68/195 (34%), Gaps = 5/195 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M G++ A RLS VADN++N TVG++ V+FS V V Sbjct: 6 MMR---TGVSGMNAQGTRLSGVADNVANAGTVGYKRTNVQFSNYVTP-SGQYAYVPGGVK 61 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 S + G +TG D + G+ +F + LTR G F DG L + +G Sbjct: 62 SHIGHDISISGPAHATGRSGDAMIHGNGFFRVADENGKEFLTRAGSFTRDKDGYLRNTAG 121 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 Y + + ++F +I K + + + Q + S Sbjct: 122 YYLLNEDGERIQIKGGPTDLFGPEVTTKIDFKANFNPSAKVMEPEGGQIDPKDPKSYNQK 181 Query: 180 NIPPTPLEDLSGVTV 194 T V V Sbjct: 182 KSMTTYDSQGKKVQV 196 Score = 76.1 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 29/167 (17%), Positives = 51/167 (30%), Gaps = 11/167 (6%) Query: 84 LEGDAWFALESPRGIILTRDGRFKVTDDG--SLVSASGK----YPVLDMASVPIQIPQKD 137 +E F L P T + G SLV+ G D Sbjct: 233 IEPTKEFKLTLPDSEGKTFEVDVNFGGVGADSLVTQKGNLFAFEAEADGMESGAFDGFTF 292 Query: 138 EIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV----- 192 E +QK +++ +G+ +V + S N Sbjct: 293 GKNGEIEVMYSNQKTRIVGYVGITTVASPESLTFLGGSVFETNSQTGAQMMGRPGDGVFG 352 Query: 193 TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 T+ G+LEDSN + E+ MI + + + + + + M + Sbjct: 353 TLSSGYLEDSNVDMGDELTDMIEAQRNYTANSKVFQTGSELMDVIVN 399 >gi|295690742|ref|YP_003594435.1| fagellar hook-basal body protein [Caulobacter segnis ATCC 21756] gi|295432645|gb|ADG11817.1| fagellar hook-basal body protein [Caulobacter segnis ATCC 21756] Length = 587 Score = 82.2 bits (201), Expect = 6e-14, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 57/135 (42%), Gaps = 7/135 (5%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 ++ G++ +A L+ ++DN++N +TVG++ FS +V + + V + Sbjct: 4 NSAMLAGVSGLVANSSALAAISDNIANVNTVGYKRSSSNFSTLVTSGSKNQTYSAGGVKA 63 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-------LTRDGRFKVTDDGSL 114 + G ST + LD ++ G +F + TR G F++ G L Sbjct: 64 QTHQFISQQGLTQSTTSNLDLSISGSGFFVATEKPENLTAADTRSFTRAGSFQLDSLGYL 123 Query: 115 VSASGKYPVLDMASV 129 + +G Y +A Sbjct: 124 RNDAGLYLQGWLADP 138 Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 11/90 (12%), Positives = 29/90 (32%), Gaps = 5/90 (5%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLEDSNANSMYE 209 IA + + + G + P ++ LE S + E Sbjct: 495 IAQVAVATFSNPNGLKGVNGNAYRVTNESGTYSLKPPGQGGAGSLAPSTLEASTVDLSTE 554 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +I + +++ + +I ++ + E + Sbjct: 555 FTGLITTQRAYSASSKIITTADQMLEELLN 584 >gi|34498340|ref|NP_902555.1| flagellar hook protein flgE [Chromobacterium violaceum ATCC 12472] gi|34104194|gb|AAQ60553.1| flagellar hook protein flgE [Chromobacterium violaceum ATCC 12472] Length = 416 Score = 81.8 bits (200), Expect = 7e-14, Method: Composition-based stats. Identities = 38/194 (19%), Positives = 76/194 (39%), Gaps = 3/194 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVAS 61 F GL+ A +L ++ +N++N +TVGF++ + +F ++ + + V+ Sbjct: 2 GFQQGLSGINAASVQLDSIGNNVANANTVGFKSSRTEFGDLYAQSIFGTAANSPGNGVSV 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGK 120 + G+ +TG LD A+ + +F + P G +RDG+F+V G LV++ G Sbjct: 62 LAVTANMSAGNTENTGRSLDLAINNNGFFIMNQPNGTQTYSRDGQFQVNSQGYLVNSYGA 121 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 Y + Q IS + + + + V + P Sbjct: 122 YLQGYGVNTSGQPQVGPLQNLQITNTTISPQATSQISWPVQLNSNATVPVNSPVNPTDPT 181 Query: 181 IPPTPLEDLSGVTV 194 P + ++ Sbjct: 182 TYNWPSPTVVYDSL 195 Score = 71.8 bits (174), Expect = 8e-11, Method: Composition-based stats. Identities = 17/135 (12%), Positives = 42/135 (31%), Gaps = 5/135 (3%) Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169 + + + ++ + V + + + K + + L + QG Sbjct: 281 SNQIAQNYGTGTITQNGSAPGLLTGVSIASNGVVQATFSNSQTKTLGQVALATFVNPQGL 340 Query: 170 VRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224 + + + P + T+ G +EDSN N E+ MI + + + Sbjct: 341 LNLGGNQWQQSGNSGPATVNQPGTGNAGTLTAGSVEDSNVNLTNELVNMITAQRYYQANA 400 Query: 225 TLIDENEKSMLEAIR 239 I + + + Sbjct: 401 QTIKTQDTLIQTLLN 415 >gi|90423517|ref|YP_531887.1| hypothetical protein RPC_2013 [Rhodopseudomonas palustris BisB18] gi|90105531|gb|ABD87568.1| protein of unknown function DUF1078-like [Rhodopseudomonas palustris BisB18] Length = 464 Score = 81.8 bits (200), Expect = 7e-14, Method: Composition-based stats. Identities = 35/195 (17%), Positives = 68/195 (34%), Gaps = 13/195 (6%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + N ++ A + ++ N++N T GF+ I F+++V + V + Sbjct: 6 AINTAISGMAAQSYAIGNISGNIANAHTPGFKRIDTSFADLVS-NQGPKRTLAGPVLAEA 64 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPR----GIILTRDGRFKVTDDGSLVSASG 119 + + G +TG + A+ G +F + + TR G F V G LV+ +G Sbjct: 65 RFTTSVQGPLTATGVGTNMAINGSGFFTVMQRESGSAQSVYTRRGDFAVDKQGYLVNGTG 124 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 Y + + V G I + +D + + + S Sbjct: 125 GYLLGNNLDP--------VSGRVTSSGLIKIANTTLPGRQTTRIDYAANLPKVPTTTASV 176 Query: 180 NIPPTPLEDLSGVTV 194 +P S V + Sbjct: 177 GGDSSPYTVASAVVI 191 Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 16/128 (12%), Positives = 43/128 (33%), Gaps = 1/128 (0%) Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 + + D + ++ +AT G+ + G Sbjct: 337 TVTTNALAQDGYASGSLKSLSVSGDGTIVGSFSNEMTASVATAGVVNFMNPNGLRPTSGG 396 Query: 176 GISPN-IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 + PL L+G T+ G +E SN++ + +++ Q +++ ++ + M Sbjct: 397 NYEQSRDSGAPLAGLNGGTIVGGNIEGSNSDVAGQFSKLVATQQAYSANVKVMTTANQMM 456 Query: 235 LEAIRNIA 242 + + + Sbjct: 457 ADLLNAVR 464 >gi|217976240|ref|YP_002360387.1| flagellar hook protein FlgE [Methylocella silvestris BL2] gi|217501616|gb|ACK49025.1| flagellar basal body FlaE domain protein [Methylocella silvestris BL2] Length = 414 Score = 81.8 bits (200), Expect = 7e-14, Method: Composition-based stats. Identities = 35/118 (29%), Positives = 62/118 (52%), Gaps = 2/118 (1%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 ++ ++ A +LSTV+DN++N+DT G++ +F ++ S VA+ Sbjct: 5 SALTASVSGMAAQANKLSTVSDNIANSDTTGYKQAMTEFENLISQ-AGTSSYNASGVATV 63 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWF-ALESPRGIILTRDGRFKVTDDGSLVSASG 119 Y E G+ ST + D A++G+ +F ++ + LTR G FK G+LV+A+G Sbjct: 64 VRYNISEHGNLKSTTSSTDLAIQGNGFFLVGDANGSVFLTRAGNFKPDATGNLVNAAG 121 Score = 62.2 bits (149), Expect = 7e-08, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 27/75 (36%), Gaps = 1/75 (1%) Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 G V +NS P + P +++ LE S + ++ MI + + S + + Sbjct: 340 AGDVFSDNSLSGPILVGDPG-LGGFGSIQSEKLESSTVDLASQLTDMIVAQRSYESNSKV 398 Query: 227 IDENEKSMLEAIRNI 241 + + + Sbjct: 399 FQTGSELLSTLNNML 413 >gi|167835111|ref|ZP_02461994.1| flagellar hook protein FlgE [Burkholderia thailandensis MSMB43] Length = 413 Score = 81.8 bits (200), Expect = 7e-14, Method: Composition-based stats. Identities = 26/189 (13%), Positives = 61/189 (32%), Gaps = 2/189 (1%) Query: 8 GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVASGKEY 65 GL+ L + +N++N +TVGF+ +FS++ + Sbjct: 6 GLSGLAGASSNLDVIGNNIANANTVGFKGSTAQFSDMYANSVASAVNNPIGIGTMLASVQ 65 Query: 66 LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125 G+ S+ + L+ A+ G+ +F + + + +RDG F+ +G +V++ G + Sbjct: 66 QQFSQGTITSSTSSLNVAINGNGFFQMSNNGVLTYSRDGTFQRDKNGYIVNSQGLSLMGY 125 Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185 A I + ++ + + Sbjct: 126 QADKNGVINTAQTVPLQAPTNNMAPTATTRISGQFNLNSQDTVPTKTPFDYADSTTYNFQ 185 Query: 186 LEDLSGVTV 194 ++ Sbjct: 186 TAVQVYDSL 194 Score = 66.8 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 26/212 (12%), Positives = 56/212 (26%), Gaps = 9/212 (4%) Query: 34 FRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE 93 F E +KN + V K G+ G F++ Sbjct: 204 FVKSAAGTWEAYAGVKNQTPTDLGTVTFDTSGAIKSTTL---AGSTTPTTTLGQFQFSIP 260 Query: 94 SPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ-KG 152 + G + +T G + + + G S + Sbjct: 261 NTDGSATPQALTLDLTGTTQYGGKDGVTNLAPDGFASGTLTTFTIGNDGKLTGNYSNGQT 320 Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSM 207 + + L + + G V N+ + + T++ LE+SN + Sbjct: 321 ATLGQIVLANFNNPNGLVNIGNNQYVETAASGVPQISAPGSTNHGTLQGSALENSNVDLT 380 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 ++ +I + + + I + I Sbjct: 381 SQLVNLITAQRNYQANAQTIKTQQAVDQTLIN 412 >gi|312115280|ref|YP_004012876.1| flagellar hook-basal body protein [Rhodomicrobium vannielii ATCC 17100] gi|311220409|gb|ADP71777.1| flagellar hook-basal body protein [Rhodomicrobium vannielii ATCC 17100] Length = 413 Score = 81.8 bits (200), Expect = 7e-14, Method: Composition-based stats. Identities = 35/128 (27%), Positives = 54/128 (42%), Gaps = 2/128 (1%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 N + A LSTVADN++N T G++ +FS +V + Q V Sbjct: 7 LNTSASGMAAQSTALSTVADNIANVSTTGYKRASTEFSTLVASSGAGNYQSG-GVDVDTR 65 Query: 65 YLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGKYPV 123 ST + D A++G+ +F + P G LTR G F+ DG+L +A+G + Sbjct: 66 VAIGSQSGTTSTSSSTDLAVDGNGFFIVSGPNGTPALTRAGSFEKQADGTLENAAGYTLL 125 Query: 124 LDMASVPI 131 Sbjct: 126 GYPVGTTP 133 Score = 55.6 bits (132), Expect = 5e-06, Method: Composition-based stats. Identities = 13/90 (14%), Positives = 27/90 (30%), Gaps = 5/90 (5%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYE 209 T+ L V + PN ++ T+ LE+S+ + E Sbjct: 321 AYTIPLAMVASPDNMTVISGNAYLPNQDSGSVQIGTAGTNGFGTIGSYTLENSDVDLATE 380 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + +MI + S + + + Sbjct: 381 LTRMIQSQNIYQSNAKVFQTGSDLLKVLVN 410 >gi|332284019|ref|YP_004415930.1| hypothetical protein PT7_0766 [Pusillimonas sp. T7-7] gi|330427972|gb|AEC19306.1| hypothetical protein PT7_0766 [Pusillimonas sp. T7-7] Length = 412 Score = 81.8 bits (200), Expect = 8e-14, Method: Composition-based stats. Identities = 32/135 (23%), Positives = 62/135 (45%), Gaps = 7/135 (5%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 F GL+ A Q L + +N++N+ TVGF+ F++V + + + +++ + Sbjct: 2 GFGQGLSGLNAAAQNLDVIGNNIANSGTVGFKAGTASFADVYASSRVGLGTQVASIN--- 58 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPR--GIILTRDGRFKVTDDGSLVSASGKY 121 +GS +TG + D A++G + + ++ TR+G+F DG LV+A G Sbjct: 59 --QRFTIGSVSNTGNQFDMAIDGASGLFRVTDPSGSVLYTRNGQFSPDKDGYLVNAQGHR 116 Query: 122 PVLDMASVPIQIPQK 136 +P + Sbjct: 117 LTGYEEGGTNLVPIR 131 Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 55/210 (26%), Gaps = 10/210 (4%) Query: 35 RTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES 94 + S Q +S G ++ + G ++ A++ A Sbjct: 206 KREGTATSSTWDVYYRIGGQTVSAPLDGATQMTFDQGGRLTAP-TTPVAVQMTAVPGASP 264 Query: 95 PRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV 154 + T D G + G+ + I I GE G + Sbjct: 265 AEALNFTVDYADSTQFGGDFAFSFGQDGYPTGEYASMAIAADGSIVASYTNGETQTMGSL 324 Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYE 209 + L QG + +K +E+SN + E Sbjct: 325 V----LVDFANVQGLQPVGGNAWVETSTSGQPILGRPGSNGMARIKGQAVEESNVDMSQE 380 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + MI + + + I ++ M I Sbjct: 381 LVNMIIAQRTYQANAQTIKTQDQIMQTLIS 410 >gi|260774938|ref|ZP_05883839.1| flagellar hook protein FlgE [Vibrio coralliilyticus ATCC BAA-450] gi|260609193|gb|EEX35351.1| flagellar hook protein FlgE [Vibrio coralliilyticus ATCC BAA-450] Length = 434 Score = 81.8 bits (200), Expect = 8e-14, Method: Composition-based stats. Identities = 28/129 (21%), Positives = 56/129 (43%), Gaps = 6/129 (4%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGK 63 + L+ A + L+T ++N++N +T GF+ + +F +V + V + K Sbjct: 3 YVALSGLSAAQLDLNTTSNNIANANTYGFKESRAEFGDVYSNSLFTHAKTTPGQGVQAAK 62 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWF----ALESPRGIILTRDGRFKVTDDGSLVSASG 119 GS I T +D + G +F +P LTR+G F + D + +A+ Sbjct: 63 VAQQFHEGSSIYTNNPMDLRVSGTGFFAVAKDRLAPTTNELTRNGAFHLNKDNYMTTAND 122 Query: 120 KYPVLDMAS 128 ++ + + Sbjct: 123 EFLLGYQVN 131 Score = 65.3 bits (157), Expect = 7e-09, Method: Composition-based stats. Identities = 13/98 (13%), Positives = 36/98 (36%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI-----PPTPLEDLSGVTVKRGFLED 201 + + ++ + L V QG ++ + S T+ G LE Sbjct: 335 YSNGENIILGRVALVRVPNEQGLDKKGGTQWDSTQFSGNKIWGESNKGSFGTISSGVLEQ 394 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +N + E+ +I + F + + ++ + ++ ++ Sbjct: 395 ANIDMTQELVDLISAQRNFQANSRSLEVHNQTQQNILQ 432 >gi|46203395|ref|ZP_00051590.2| COG1749: Flagellar hook protein FlgE [Magnetospirillum magnetotacticum MS-1] Length = 293 Score = 81.8 bits (200), Expect = 8e-14, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 65/181 (35%), Gaps = 1/181 (0%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 G++ A R+STVA+N+ N +T G++ +FS ++ + V + Sbjct: 7 LRTGVSGMNAQSNRISTVAENIQNANTTGYKRTSAEFSSLLLDSGDVGTYNSGAVETTLR 66 Query: 65 YLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYPV 123 E G ST ++ D A++G+ +F + LTR G F V + +G + + Sbjct: 67 RSIGERGPISSTNSDKDLAIQGNGFFVVRDESGAPFLTRAGNFVVDGKSGNLVNAGGFTL 126 Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183 L + + ++ G+ +V + + + Sbjct: 127 LGYSLANGAPNPVLNGVADLKPVNVNVMGQEARPSTNATVSGNLSYETPVYDPTAAGAIG 186 Query: 184 T 184 Sbjct: 187 Y 187 >gi|167568107|ref|ZP_02361023.1| flagellar hook protein FlgE [Burkholderia oklahomensis EO147] gi|167574225|ref|ZP_02367099.1| flagellar hook protein FlgE [Burkholderia oklahomensis C6786] Length = 413 Score = 81.8 bits (200), Expect = 8e-14, Method: Composition-based stats. Identities = 30/201 (14%), Positives = 65/201 (32%), Gaps = 6/201 (2%) Query: 8 GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVASGKEY 65 GL+ L + +N++N +TVGF+ +F+++ + Sbjct: 6 GLSGLAGASSDLDVIGNNIANANTVGFKGSTAQFADMYANSVASAVNNPIGIGTMLASVQ 65 Query: 66 LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125 G+ S+ + L+ A+ G+ +F + + + +RDG F+ +G +V++ G + Sbjct: 66 QQFSQGTITSSTSSLNVAINGNGFFQMSNNGVVTYSRDGTFQRDKNGYIVNSQGLNLMGY 125 Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185 A I + I+ T + P Sbjct: 126 AADANGVINSAATVPLQAPTTNIAPTATSKITGQFNLNSQDAVPATTPFNYSDPTSYNYT 185 Query: 186 LEDLSGVTVKRGFLEDSNANS 206 + ++ N N Sbjct: 186 TSVQAFDSLGGSQ----NVNL 202 Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 12/98 (12%), Positives = 33/98 (33%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLED 201 + + + + L + + G V N+ + + T++ LE+ Sbjct: 315 YSNGQTSTLGQIVLANFNNPNGLVSVGNNQYVETAASGVPQISAPGSTNHGTLQGSALEN 374 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + ++ ++I + + + I + I Sbjct: 375 SNVDLTSQLVKLITAQRNYQANAQTIKTQQTVDQTLIN 412 >gi|319405421|emb|CBI79040.1| Flagellar hook protein FlgE [Bartonella sp. AR 15-3] Length = 402 Score = 81.5 bits (199), Expect = 9e-14, Method: Composition-based stats. Identities = 35/127 (27%), Positives = 51/127 (40%), Gaps = 5/127 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M G++ A RLS VADN++N TVG++ V+FS V V Sbjct: 6 MMR---TGVSGMNAQGTRLSGVADNVANVGTVGYKRTNVQFSNYVTP-SGQYAYVPGGVK 61 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 S + G +TG D + G +F + LTR G F G L + +G Sbjct: 62 SHIGHDISISGPAHATGRSGDVMIHGSGFFRVADENGKEFLTRAGSFTRDKGGYLRNTAG 121 Query: 120 KYPVLDM 126 Y + + Sbjct: 122 YYLLNED 128 Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 51/167 (30%), Gaps = 11/167 (6%) Query: 84 LEGDAWFALESPRGIILTRDGRFKVTDDG--SLVSASGK----YPVLDMASVPIQIPQKD 137 +E F L P T + G SLV+ G D Sbjct: 233 IEPTEEFKLTLPDSEGETFEVDVNFGGVGADSLVTQKGNLFAFEAEADGMESGAFDGFTF 292 Query: 138 EIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV----- 192 E +QK ++I +G+ +V + S N Sbjct: 293 GKNGEIEVMYSNQKTRIIGYVGMTTVASPESLTFLGGSVFETNSQTGAQMMGRPGDGVFG 352 Query: 193 TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 T+ G+LEDSN + E+ MI + + + + + + M + Sbjct: 353 TLSSGYLEDSNVDIGDELTDMIEAQRNYTANSKVFQTGSELMDVIVN 399 >gi|197104253|ref|YP_002129630.1| flagellar hook protein FlgE [Phenylobacterium zucineum HLK1] gi|196477673|gb|ACG77201.1| flagellar hook protein FlgE [Phenylobacterium zucineum HLK1] Length = 452 Score = 81.5 bits (199), Expect = 9e-14, Method: Composition-based stats. Identities = 34/169 (20%), Positives = 64/169 (37%), Gaps = 7/169 (4%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 G++ +A L+ ++DN++N +TV ++ +V F+ VV A V S Sbjct: 1 MLAGVSGLVANSSALAAISDNIANVNTVAYKRNQVNFANVVTAQAVKGKYSAGGVQSVTR 60 Query: 65 YLSKEVGSFISTGTELDFALEGDAWFALES-------PRGIILTRDGRFKVTDDGSLVSA 117 + G ++ + D A+ GD +F + + TR G F V DG +V+ Sbjct: 61 QFVSQQGLIQASNSTTDLAISGDGFFVVANKGLGLTGADPRSFTRSGAFAVDSDGYMVND 120 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 +G Y ++ + + G +A V + Sbjct: 121 AGLYLQGWPVQADGTFNVNPSDLSLMQSINVKNLGSAVAPTTELGVTAN 169 Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 18/120 (15%), Positives = 40/120 (33%), Gaps = 5/120 (4%) Query: 125 DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT 184 + A V I + V + + + IA +G+ + + P IP Sbjct: 330 NGAGVGNVIAIDVDPEGVVSAVYDNSQIRKIAKIGVATFPNPDALAAVSGNAYRPTIPAG 389 Query: 185 PLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + + LE S + E +I + +++ + +I ++ + E I Sbjct: 390 EMTVKEAGIGGAGKISPSSLEASTVDLSAEFTGLIATQKAYSASSKIITTADQMLEELIN 449 >gi|226327742|ref|ZP_03803260.1| hypothetical protein PROPEN_01615 [Proteus penneri ATCC 35198] gi|225203446|gb|EEG85800.1| hypothetical protein PROPEN_01615 [Proteus penneri ATCC 35198] Length = 111 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 12/96 (12%), Positives = 33/96 (34%), Gaps = 5/96 (5%) Query: 149 SQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSN 203 S + + + L + G + + + + +G++E SN Sbjct: 15 SPAPQQVGQLTLTTFINDSGLESVGENLYLETASSGAPTENAPGINGAGLLYQGYVETSN 74 Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 N E+ MI + + + I +++ + + + Sbjct: 75 VNVAEELVNMIQTQRAYEINSKAISTSDQMLQKLTQ 110 >gi|150019072|ref|YP_001311326.1| hypothetical protein Cbei_4260 [Clostridium beijerinckii NCIMB 8052] gi|149905537|gb|ABR36370.1| protein of unknown function DUF1078 domain protein [Clostridium beijerinckii NCIMB 8052] Length = 363 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 68/231 (29%), Gaps = 38/231 (16%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M G++ + +L + +N++N T F++ +F +++ ++ Sbjct: 1 MLRCMYSGISGMKVNQTKLDVIGNNIANVGTTAFKSSSARFKDMLYQNASEATAPTSVLG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR------------ 96 Q G+ +STG LD ++GD + + Sbjct: 61 GTNAKQIGLGAQVSSINKVMGQGNALSTGRSLDVCIDGDGYLVVAKGDLNSGIGANQSTG 120 Query: 97 --------------GIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNV 142 + TRDG + G+L++A G + + D ++ Sbjct: 121 APDTAATDATGEISETLFTRDGNLTLDYQGNLLTADGHRVMGYYLTASKNDGGTDNAKSL 180 Query: 143 GEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT 193 + + +S +R S I TP + Sbjct: 181 TYDSTNNVINANYVNADSKQLTVSDSTMRPLVIPDSVTISGTPGAADAVTQ 231 Score = 73.0 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 14/104 (13%), Positives = 32/104 (30%), Gaps = 20/104 (19%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPL--------------------EDLSGVTV 194 I + + S +G + + P+ ++ Sbjct: 256 IGQIAMASFKNPEGLTDLGGNMCVNSSNSGPIVYKTGKVDTSTSSSTTTATGNQGGFGSL 315 Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 +G LE SN + + MI T+ F + + +I ++ + Sbjct: 316 IQGALEGSNVDLTEQFTDMITATRSFQAASKMITTGDEILQTIT 359 >gi|16125154|ref|NP_419718.1| flagellar hook protein [Caulobacter crescentus CB15] gi|221233884|ref|YP_002516320.1| flagellar hook protein FlgE [Caulobacter crescentus NA1000] gi|6226612|sp|P35806|FLGE_CAUCR RecName: Full=Flagellar hook protein flgE gi|3493243|gb|AAC33329.1| flagellar hook protein [Caulobacter crescentus CB15] gi|13422168|gb|AAK22886.1| flagellar hook protein [Caulobacter crescentus CB15] gi|220963056|gb|ACL94412.1| flagellar hook protein FlgE [Caulobacter crescentus NA1000] Length = 591 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 73/213 (34%), Gaps = 8/213 (3%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 ++ G++ +A L+ ++DN++N +TVGF+ FS +V + + V + Sbjct: 4 NSAMLAGVSGLIANSSALAAISDNIANVNTVGFKRSTSNFSTLVTSGNKNQTYSAGGVKA 63 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-------LTRDGRFKVTDDGSL 114 + G ST + LD ++ G +F + TR G F++ + G L Sbjct: 64 QTHQFISQQGLTQSTTSNLDISISGAGFFVTTEKPENLTATDTRSFTRAGSFQLDNLGYL 123 Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174 + +G Y +A + D + A V ++ + Sbjct: 124 RNDAGLYLQGWLADPVSGLITPDPSDLMQLASINVGSVGGTAEK-TTRVGVNANLRSEQP 182 Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSM 207 + + S V N + + Sbjct: 183 VAAAVSYKVGTAGSPSKTNVVDSATNSHNYDVV 215 Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 10/90 (11%), Positives = 27/90 (30%), Gaps = 5/90 (5%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLEDSNANSMYE 209 IA + + + G + + LE S + E Sbjct: 499 IAQVAIATFSNPNGLKGVNGNAYRVTNESGTYSLKAPSQGGAGALAPSTLEASTVDLSQE 558 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +I + +++ + +I ++ + E + Sbjct: 559 FTGLITTQRAYSASSKIITTADQMLEELLN 588 >gi|149927798|ref|ZP_01916049.1| flagellar hook protein E [Limnobacter sp. MED105] gi|149823420|gb|EDM82651.1| flagellar hook protein E [Limnobacter sp. MED105] Length = 437 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 36/151 (23%), Positives = 65/151 (43%), Gaps = 4/151 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK---ISFVA 60 SF GL+ A ++ L +A+N+SN VGF+ + +FS+V N + Sbjct: 8 SFQQGLSGLNAAQRGLEVIANNVSNASVVGFKGSEAEFSDVFARAFNGARSTNGIGLGTS 67 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + G+ TG LD A+ G +F +++ I TR+G+F + ++G +V++ G Sbjct: 68 LAAVTQNFKQGNINVTGNPLDLAISGTGFFKVQAGNGDNIYTRNGQFTLNNEGVIVNSRG 127 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQ 150 P + +G I Sbjct: 128 DKLQGFPVDAATGRPSDVAQDILVPRGSIPP 158 Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 22/177 (12%), Positives = 48/177 (27%), Gaps = 9/177 (5%) Query: 68 KEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMA 127 ++ G + + + +V G+ Sbjct: 263 TPNSGNLTVDMSRFVTASGVPFSSTGTAPNQFTFDMSNTTQYGSSFVVQNLGQDGFESSP 322 Query: 128 SVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPL- 186 + + G++ A +GLY +G ++G P Sbjct: 323 FAGFDVGADGMLTISYANGQLVNH----AQIGLYRFPNPEGLQPVGSNGWLATNSSGPEL 378 Query: 187 ----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 ED + ++ G LE+SN + E+ MI + + + + I + Sbjct: 379 VSLSEDTAFGIIQSGALEESNIDLTAELVAMISAQRVYQANSQTIKTQDSIFQTITN 435 >gi|254503336|ref|ZP_05115487.1| Flagellar basal body protein FlaE [Labrenzia alexandrii DFL-11] gi|222439407|gb|EEE46086.1| Flagellar basal body protein FlaE [Labrenzia alexandrii DFL-11] Length = 421 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 5/126 (3%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 G++ A +L VADN++N+ T G++ + +F+ V A V + + Sbjct: 1 MRTGVSGMNAQSSKLGAVADNIANSSTTGYKRAETEFASQVLAQGGGSYNSG-GVQAHTK 59 Query: 65 YLSKEVGSFISTGTELDFALEGDAWFALES----PRGIILTRDGRFKVTDDGSLVSASGK 120 Y + GS T ++LD A++G+ +F + LTR G F G LV+ +G Sbjct: 60 YAISDQGSMSFTTSKLDLAVDGNGFFIVSDSTGAGASQALTRAGSFVPDGQGYLVNTAGM 119 Query: 121 YPVLDM 126 Y Sbjct: 120 YLQGYP 125 Score = 69.1 bits (167), Expect = 4e-10, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 9/138 (6%) Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 TD G V+ + ++ + ++++ G+ + I + L V Sbjct: 285 TYTDAGFTVTNVDADGNAPSSVEKVEFGEDGTLYSIYTNGDR----RPIYKIPLADVPSP 340 Query: 167 QGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221 + P+I D + G LE SN + E+ MI + + Sbjct: 341 DKLDPVSGNIYRPSIDSGDVRVGFPGDGGLGELAVGALEGSNVDLANELTSMIESQRTYT 400 Query: 222 SITTLIDENEKSMLEAIR 239 + + + M E + Sbjct: 401 ANSQVFKAGSDLMQELVN 418 >gi|224373466|ref|YP_002607838.1| flagellar basal body and hook protein [Nautilia profundicola AmH] gi|223589855|gb|ACM93591.1| flagellar basal body and hook protein [Nautilia profundicola AmH] Length = 642 Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 30/125 (24%), Positives = 51/125 (40%), Gaps = 3/125 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID---QKIS 57 M TSF G+ + + + DN++N +T G++ +FS + N Sbjct: 1 MTTSFYNGITGLKSFQYGIDIWGDNIANINTTGYKEQIPEFSTLFSETLNSDPVYSDIGM 60 Query: 58 FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSA 117 ++ + GS I+T D ++ G+ W A++ TR G F G LV Sbjct: 61 GSKLSSTAINLDQGSLINTDNPFDVSINGEGWLAVKRYNDTYYTRTGSFTRDAQGYLVDD 120 Query: 118 SGKYP 122 +G Y Sbjct: 121 NGDYL 125 Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 18/144 (12%), Positives = 44/144 (30%), Gaps = 8/144 (5%) Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162 F +T A+ + + + + + + V+ + +Y Sbjct: 494 TLNFNMTSYAKTDLATSYSFTQNGVEEGFLKNYQIDQNGQIQALFSNGQMSVLGQIPVYH 553 Query: 163 VDMSQGFVRRENSGISPNIPP--------TPLEDLSGVTVKRGFLEDSNANSMYEMGQMI 214 QG + +SG ++ LE SN + M ++I Sbjct: 554 FQNDQGLESLGGNLFRETANSNKAILYTDQNGNYISGSSIISNTLEASNVDFSQAMTELI 613 Query: 215 HLTQKFNSITTLIDENEKSMLEAI 238 + ++S + +++ + AI Sbjct: 614 VTQKAYSSAAKTVTTSDQMIQRAI 637 >gi|303248690|ref|ZP_07334944.1| fagellar hook-basal body protein [Desulfovibrio fructosovorans JJ] gi|302489946|gb|EFL49872.1| fagellar hook-basal body protein [Desulfovibrio fructosovorans JJ] Length = 549 Score = 81.1 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 30/141 (21%), Positives = 59/141 (41%), Gaps = 17/141 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---DIDQKISF 58 T+ G++ +A +++++ +N++N +T GF++ + F ++ A +DQ Sbjct: 6 NTAMWSGVSGLMANSTKMTSIGNNLANVNTYGFKSARTDFVTLMSATIGTASGVDQVGRG 65 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALES--------------PRGIILTRDG 104 V G G TGT D A+ G+ +F ++ + + TR G Sbjct: 66 VRVGSVVTDYSQGGLEITGTNTDMAINGNGFFMVKQKSSVGSNGKMLNTGNQTMYYTRAG 125 Query: 105 RFKVTDDGSLVSASGKYPVLD 125 F ++G L S +G Sbjct: 126 DFHFDENGYLSSTTGLAVQGW 146 Score = 74.9 bits (182), Expect = 8e-12, Method: Composition-based stats. Identities = 26/214 (12%), Positives = 54/214 (25%), Gaps = 3/214 (1%) Query: 26 MSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALE 85 ++N + G+ F V + + + + + + T D Sbjct: 336 VANISSSGYPEFTANFKSV---SNGSFTDQGNATSISLNLGMRCTTGWATGTTLGDIDPT 392 Query: 86 GDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEK 145 +P + + + S V S + + Sbjct: 393 DMTTLGSFNPAQLKINSNVTTNYATSSSTVFTSQNGYTAGLLTSVSVDSDGVLTGTFSNG 452 Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNAN 205 + +A + G + S S ++ LE SN + Sbjct: 453 VSLQLWVLALANFTNLQGLNNAGNSLYTATLESGEGTTNRPNSGSVGSISGNTLESSNVD 512 Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 EM MI + F + I + + E I+ Sbjct: 513 MAAEMVSMIVTQRGFEGNSKTITTVDTMLSEIIQ 546 >gi|283850852|ref|ZP_06368138.1| protein of unknown function DUF1078 [Desulfovibrio sp. FW1012B] gi|283573775|gb|EFC21749.1| protein of unknown function DUF1078 [Desulfovibrio sp. FW1012B] Length = 551 Score = 81.1 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 32/139 (23%), Positives = 55/139 (39%), Gaps = 17/139 (12%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---DIDQKISFVA 60 S G++ LA ++ST+ +N++N +TVGF+ + F +++ A Q V Sbjct: 8 SMWSGVSGLLANSTKMSTIGNNLANVNTVGFKGARTDFMDLMSANIGTAAGDKQIGRGVR 67 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALES--------------PRGIILTRDGRF 106 G G +T LD A+ G+ +F ++ + +R G F Sbjct: 68 VGTVVSDYSQGGLETTSNSLDMAINGNGFFMVKQKSQVGSNGKMLNTGNQTNYYSRAGNF 127 Query: 107 KVTDDGSLVSASGKYPVLD 125 DG LV+ G Sbjct: 128 SFDSDGYLVTPQGLAVQGW 146 Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 35/94 (37%), Gaps = 5/94 (5%) Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNAN 205 + + + + L + QG R ++ + + S ++ LE SN + Sbjct: 455 QTQKLWALALANFTNLQGLSREGSNLYAATLESGQGTTNRANTGSVGSISGNTLESSNVD 514 Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 EM MI + F + + I + + E I+ Sbjct: 515 MATEMVSMILTQRGFEANSKTITTVDSMLSEVIQ 548 >gi|124268254|ref|YP_001022258.1| flagellar basal body and hook protein [Methylibium petroleiphilum PM1] gi|124261029|gb|ABM96023.1| flagellar basal body and hook protein [Methylibium petroleiphilum PM1] Length = 420 Score = 81.1 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 30/135 (22%), Positives = 55/135 (40%), Gaps = 3/135 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK--ISFVAS 61 SF GL+ A + L + +N++N T G ++ + +F +V N V Sbjct: 2 SFQQGLSGLNAASKNLEIIGNNVANASTFGAKSSRAEFGDVYANALNGSGTNMVGIGVNL 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESP-RGIILTRDGRFKVTDDGSLVSASGK 120 G+ +T +D A+ G +F + + R+G+FK+ +G +V+ SG Sbjct: 62 ATVAQQFTQGNITTTDNPMDLAINGSGFFQVSDGKNPTMYARNGQFKIDREGFIVNNSGY 121 Query: 121 YPVLDMASVPIQIPQ 135 + A I Sbjct: 122 KLLGYPADGQGVIVP 136 Score = 78.4 bits (191), Expect = 8e-13, Method: Composition-based stats. Identities = 21/133 (15%), Positives = 40/133 (30%), Gaps = 9/133 (6%) Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171 G V+ + I I I G+ K + L + QG Sbjct: 290 GFGVTDMSQTGYAPGQLSGISIEANGVIMARYSNGQ----SKPGGQLELANFRNPQGLQP 345 Query: 172 RENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 N+ + D + ++ G LE+SN + E+ MI + + + Sbjct: 346 LGNNVWATTFTSGDPVVGAAGDGNFGVLQSGALEESNIDLTGELVNMITAQRVYQANAQT 405 Query: 227 IDENEKSMLEAIR 239 + + M + Sbjct: 406 VKTQDSMMQTLVN 418 >gi|253827676|ref|ZP_04870561.1| flagellar hook protein [Helicobacter canadensis MIT 98-5491] gi|253511082|gb|EES89741.1| flagellar hook protein [Helicobacter canadensis MIT 98-5491] Length = 765 Score = 81.1 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 29/150 (19%), Positives = 55/150 (36%), Gaps = 22/150 (14%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56 M S G++ + + ++N++N +T GFR +F + N ++ Sbjct: 1 MVGSLYSGISGIKTHQTGIDVTSNNIANVNTTGFRANSPEFKSLFSTHLNYVNSNSPVAN 60 Query: 57 ---SFVASGKEYLSKEVGSFISTGTELDFALEGDAWF---------------ALESPRGI 98 V G ++ G++++ + + A G WF + Sbjct: 61 DYNYGVTIGSNAINTNDGTYVNADGDFNVAYSGKGWFVVGLNKNGAFDITNPDYTGAQQN 120 Query: 99 ILTRDGRFKVTDDGSLVSASGKYPVLDMAS 128 TRDG F + +G LV++SG Y Sbjct: 121 YFTRDGSFSLDGEGYLVNSSGYYMYGINLG 150 Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 32/105 (30%), Gaps = 18/105 (17%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL------------------SGVTV 194 + I +G+ + QG + + N E V Sbjct: 657 EPIGRIGIAAFVNDQGLSKVGGNLFKMNAMTINGETSVVSGPPLLAWEETGNASLKYGQV 716 Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 LE SN ++ + +I + + I ++ M EAI+ Sbjct: 717 LDHMLETSNVDTGTALTDLIVYQRGYQMSAKSITTADQLMQEAIQ 761 >gi|240137459|ref|YP_002961930.1| putative Flagellar hook protein flgE [Methylobacterium extorquens AM1] gi|240007427|gb|ACS38653.1| putative Flagellar hook protein flgE [Methylobacterium extorquens AM1] Length = 460 Score = 81.1 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 41/216 (18%), Positives = 81/216 (37%), Gaps = 23/216 (10%) Query: 1 MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 M ++ ++ A LS ++ N++N+ T G++ I F +++ + Q Sbjct: 1 MDVFSALQTAVSGLKAQSFSLSNISGNIANSQTTGYKRIDTSFVDML-VDGDAKSQTAGS 59 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-----------LTRDGRFK 107 V + E + G+ +STG + A++G +FA+ TR G F Sbjct: 60 VGAFSELTNSIQGNKVSTGVSTNMAIDGQGFFAVRKKTTDAGGGEGFTAGNLYTRRGDFA 119 Query: 108 VTDDGSLVSASGKY-------PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 DG LV+ +G Y PV + I + + I+ + + Sbjct: 120 PDKDGYLVNTAGAYLVGASLDPVTGQTNGTGPIKISNAVIPAKPTTTITYSANLPKSPAT 179 Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKR 196 + +QG + + G + TP + +V + Sbjct: 180 TNAASTQGLLSAFSDG--TDARVTPANGATTGSVSQ 213 Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 19/137 (13%), Positives = 43/137 (31%), Gaps = 3/137 (2%) Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 + V+ + + + + G+ S G +A + + Sbjct: 326 QYAAASGTVTTNDLKQNGYASGTLNSVEVGENGIISGKYSNGSVIG--LARVEVAQFVNP 383 Query: 167 QGFVRRE-NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225 G + P+ L TV +E SN + E +MI Q +++ T Sbjct: 384 DGLKPDSLGNYQQTVASGEPIVGLKDSTVVGANVEQSNTDIAAEFSKMIVTQQAYSANTR 443 Query: 226 LIDENEKSMLEAIRNIA 242 ++ + + + + I Sbjct: 444 VMSTAQTMISDLLNVIR 460 >gi|218528943|ref|YP_002419759.1| hypothetical protein Mchl_0913 [Methylobacterium chloromethanicum CM4] gi|218521246|gb|ACK81831.1| protein of unknown function DUF1078 domain protein [Methylobacterium chloromethanicum CM4] Length = 460 Score = 81.1 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 41/216 (18%), Positives = 81/216 (37%), Gaps = 23/216 (10%) Query: 1 MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 M ++ ++ A LS ++ N++N+ T G++ I F +++ + Q Sbjct: 1 MDVFSALQTAVSGLKAQSFSLSNISGNIANSQTTGYKRIDTSFVDML-VDGDAKSQTAGS 59 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-----------LTRDGRFK 107 V + E + G+ +STG + A++G +FA+ TR G F Sbjct: 60 VGAFSELTNSIQGNKVSTGVSTNMAIDGQGFFAVRKKTTDAGGGEGFTAGNLYTRRGDFA 119 Query: 108 VTDDGSLVSASGKY-------PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 DG LV+ +G Y PV + I + + I+ + + Sbjct: 120 PDKDGYLVNTAGAYLVGASLDPVTGQTNGTGPIKISNAVIPAKPTTTITYSANLPKSPAT 179 Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKR 196 + +QG + + G + TP + +V + Sbjct: 180 TNAASTQGLLSAFSDG--TDARVTPANGATTGSVSQ 213 Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 19/137 (13%), Positives = 43/137 (31%), Gaps = 3/137 (2%) Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 + V+ + + + + G+ S G +A + + Sbjct: 326 QYAAASGTVTTNDLKQNGYASGTLNSVEVGENGIISGKYSNGSVIG--LARVEVAQFVNP 383 Query: 167 QGFVRRE-NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225 G + P+ L TV +E SN + E +MI Q +++ T Sbjct: 384 DGLKPDSLGNYQQTVASGEPIVGLKDSTVVGANVEQSNTDIAAEFSKMIVTQQAYSANTR 443 Query: 226 LIDENEKSMLEAIRNIA 242 ++ + + + + I Sbjct: 444 VMSTAQTMISDLLNVIR 460 >gi|167590742|ref|ZP_02383130.1| flagellar hook protein FlgE [Burkholderia ubonensis Bu] Length = 262 Score = 81.1 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 60/185 (32%), Gaps = 2/185 (1%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVASGKEYLSKE 69 L + +N++N +TVGF+ + FS++ Q Sbjct: 1 MAGASNNLDVIGNNIANANTVGFKQSRAHFSDMYANSVATSVNTQIGIGTGLASIDQQFG 60 Query: 70 VGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASV 129 G+ +TG LD A+ G+ +F + + + +RDG F +G +V + G+ + A+ Sbjct: 61 QGTINTTGNALDVAINGNGFFQMSNNGVVTYSRDGTFHRDKNGFIVDSHGRNLMGYNATA 120 Query: 130 PIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL 189 I + ++ T + V S Sbjct: 121 GGVINTAATVPMQAPTTNLAPTATTRITGQFNLNSQDKVPVTTPFSATDNTTYNYMTSIQ 180 Query: 190 SGVTV 194 ++ Sbjct: 181 VYDSL 185 >gi|313610153|gb|EFR85462.1| flagellar basal body rod protein FlgG [Listeria monocytogenes FSL F2-208] Length = 238 Score = 81.1 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 37/230 (16%), Positives = 80/230 (34%), Gaps = 16/230 (6%) Query: 23 ADNMSNTDTVGFRTIKVKFSEV--------VGAIKNDIDQKISFVASGKEYLSKEVGSFI 74 ++N++N T GF+ ++ + G + + V +++ GS Sbjct: 1 SNNVANAQTPGFKFDQLTSEVISRNKVNYQNGPVTRQVGTIDYGVRPAATHINLTAGSSY 60 Query: 75 STGTELDFALE------GDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMAS 128 T + DF ++ G +F I L+R G+F G L +A G + Sbjct: 61 ITNRDRDFFMQDTDPTQGSNFFITAKNGEISLSRGGQFHSDQFGFLRTADGANLLSATGE 120 Query: 129 VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG--FVRRENSGISPNIPPTPL 186 + ++ + + +G V +Q V+ + N T Sbjct: 121 AIQVGQKTSIRAEANGDLYNAETSQYLGRLGTKFVSANQADSLVKDGEGRLHVNGINTMN 180 Query: 187 EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 ++ G +E SN + EM Q++ + + +++ +K + Sbjct: 181 LPAGQGIIQNGVIETSNVDLGVEMVQLMDNQRMVQASKNVVNMFDKVYDK 230 >gi|254559637|ref|YP_003066732.1| flagellar hook protein flgE [Methylobacterium extorquens DM4] gi|254266915|emb|CAX22714.1| putative Flagellar hook protein flgE [Methylobacterium extorquens DM4] Length = 460 Score = 81.1 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 41/216 (18%), Positives = 81/216 (37%), Gaps = 23/216 (10%) Query: 1 MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 M ++ ++ A LS ++ N++N+ T G++ I F +++ + Q Sbjct: 1 MDVFSALQTAVSGLKAQSFSLSNISGNIANSQTTGYKRIDTSFVDML-VDGDAKSQTAGS 59 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-----------LTRDGRFK 107 V + E + G+ +STG + A++G +FA+ TR G F Sbjct: 60 VGAFSELTNSIQGNKVSTGVSTNMAIDGQGFFAVRKKTTDAGGGEGFTAGNLYTRRGDFA 119 Query: 108 VTDDGSLVSASGKY-------PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 DG LV+ +G Y PV + I + + I+ + + Sbjct: 120 PDKDGYLVNTAGAYLVGASLDPVTGQTNGTGPIKISNAVIPAKPTTTITYSANLPKSPAT 179 Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKR 196 + +QG + + G + TP + +V + Sbjct: 180 TNAASTQGLLSAFSDG--TDARVTPANGATTGSVSQ 213 Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 19/137 (13%), Positives = 43/137 (31%), Gaps = 3/137 (2%) Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 + V+ + + + + G+ S G +A + + Sbjct: 326 QYAAASGTVTTNDLKQNGYASGTLNSVEVGENGIISGKYSNGSVIG--LARVDVAQFVNP 383 Query: 167 QGFVRRE-NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225 G + P+ L TV +E SN + E +MI Q +++ T Sbjct: 384 DGLKPDSLGNYQQTVASGEPIVGLKDSTVVGANVEQSNTDIAAEFSKMIVTQQAYSANTR 443 Query: 226 LIDENEKSMLEAIRNIA 242 ++ + + + + I Sbjct: 444 VMSTAQTMISDLLNVIR 460 >gi|163850383|ref|YP_001638426.1| hypothetical protein Mext_0950 [Methylobacterium extorquens PA1] gi|163661988|gb|ABY29355.1| protein of unknown function DUF1078 domain protein [Methylobacterium extorquens PA1] Length = 460 Score = 81.1 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 41/216 (18%), Positives = 81/216 (37%), Gaps = 23/216 (10%) Query: 1 MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 M ++ ++ A LS ++ N++N+ T G++ I F +++ + Q Sbjct: 1 MDVFSALQTAVSGLKAQSFSLSNISGNIANSQTTGYKRIDTSFVDML-VDGDAKSQTAGS 59 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-----------LTRDGRFK 107 V + E + G+ +STG + A++G +FA+ TR G F Sbjct: 60 VGAFSELTNSIQGNKVSTGVSTNMAIDGQGFFAVRKKTTDAGGGEGFTAGNLYTRRGDFA 119 Query: 108 VTDDGSLVSASGKY-------PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 DG LV+ +G Y PV + I + + I+ + + Sbjct: 120 PDKDGYLVNTAGAYLVGASLDPVTGQTNGTGPIKISNAVIPAKPTTTITYSANLPKSPAT 179 Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKR 196 + +QG + + G + TP + +V + Sbjct: 180 TNAASTQGLLSAFSDG--TDARVTPANGATTGSVSQ 213 Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 19/137 (13%), Positives = 43/137 (31%), Gaps = 3/137 (2%) Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 + V+ + + + + G+ S G +A + + Sbjct: 326 QYAAASGTVTTNDLKQNGYASGTLNSVEVGENGIISGKYSNGSVIG--LARVEVAQFVNP 383 Query: 167 QGFVRRE-NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225 G + P+ L TV +E SN + E +MI Q +++ T Sbjct: 384 DGLKPDSLGNYQQTVASGEPIVGLKDSTVVGANVEQSNTDIAAEFSKMIVTQQAYSANTR 443 Query: 226 LIDENEKSMLEAIRNIA 242 ++ + + + + I Sbjct: 444 VMSTAQTMISDLLNVIR 460 >gi|92114098|ref|YP_574026.1| flagellar basal body FlaE [Chromohalobacter salexigens DSM 3043] gi|91797188|gb|ABE59327.1| flagellar basal body FlaE [Chromohalobacter salexigens DSM 3043] Length = 387 Score = 81.1 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 59/164 (35%), Gaps = 6/164 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 F+ L+ A +L T+ +N++N+ TVGF++ V+F+++ + Sbjct: 2 GFSQSLSGVNAASSQLDTIGNNIANSQTVGFKSSSVQFADIFANSQG------LGTRVAG 55 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPV 123 + GS +TG LD A+ GD +F + +R+G+ ++ DG +A G Sbjct: 56 KLQDFGTGSLETTGRGLDLAIAGDGFFQFTQNEQLAYSRNGQLSMSADGYFENAQGARLT 115 Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 + + + Q Sbjct: 116 DQQGEPLQVTQFSQGAQATTGVETAFNLNAETEALAPNNFNQDQ 159 Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 15/121 (12%), Positives = 36/121 (29%), Gaps = 5/121 (4%) Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183 D + + + + + + T+G+ + +G + ++ + Sbjct: 265 QDGNASGTFVGVEITENGEVLANYSNGNSEAVGTVGMANFRNPEGLEPQGDNLWAATQES 324 Query: 184 TPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 T ++ G LE SN + E+ MI + F + I + Sbjct: 325 GAALLGQAGTGQLGSLESGTLEASNVDLTQELVDMIIAQRNFQANNNAIQTQSDILETVT 384 Query: 239 R 239 Sbjct: 385 N 385 >gi|312879594|ref|ZP_07739394.1| fagellar hook-basal body protein [Aminomonas paucivorans DSM 12260] gi|310782885|gb|EFQ23283.1| fagellar hook-basal body protein [Aminomonas paucivorans DSM 12260] Length = 554 Score = 81.1 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 22/136 (16%), Positives = 45/136 (33%), Gaps = 7/136 (5%) Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 T GS + G Y V + G + K + + + L QG Sbjct: 418 TQYGSGFTTKGYYQDGYAMGVLEDYAVSADGTVSGVY--SNGKNQPLYQVALALFANPQG 475 Query: 169 FVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223 V+ ++ S + + + + LE +N + E +I + F + Sbjct: 476 LVKEGDTVFSESANSGMAQVMTPMEGGAGKIMGSNLEMANVDLSQEFVNLIVAQRGFQAN 535 Query: 224 TTLIDENEKSMLEAIR 239 +I +++ + E I Sbjct: 536 ARVITTSDQVLEELIN 551 >gi|218528727|ref|YP_002419543.1| flagellar hook protein FlgE [Methylobacterium chloromethanicum CM4] gi|218521030|gb|ACK81615.1| flagellar basal body FlaE domain protein [Methylobacterium chloromethanicum CM4] Length = 403 Score = 80.7 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 65/181 (35%), Gaps = 1/181 (0%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 G++ A R+STVA+N+ N T G++ +FS ++ + + V + Sbjct: 7 LRTGVSGMNAQSNRISTVAENIQNASTTGYKRTSAEFSSLLLDSGDVGNYNSGAVETTLR 66 Query: 65 YLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYPV 123 E G ST ++ D A++G+ +F + +TR G F V + +G + + Sbjct: 67 RSVSEGGPIASTNSDKDLAIQGNGFFVVSDAAGAPFMTRAGNFVVDGKTGNLVNAGGFTL 126 Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183 + + + +S G+ +V + F + Sbjct: 127 MGYSLANGTPNPVLNGVADLKPVNVSVMGQEARPSTAATVSGNLSFETPVYDPTATGAIG 186 Query: 184 T 184 Sbjct: 187 Y 187 Score = 62.6 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 19/193 (9%), Positives = 45/193 (23%), Gaps = 7/193 (3%) Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113 Q A+ + ++ +G+ + + + G V G Sbjct: 208 QMTKTAANTWSVEFLDPAPPSTSLGTTSVTFDGNGKITGSASTLVKVPNGGSIPVDLRGL 267 Query: 114 LVSASGKYPVLDMAS--VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171 + K + L V Sbjct: 268 TQLSGNHNLSGTADGSSPTSVSGTAFGEDGTVYAVYTDGTRKAAFKVPLADVASPDNLAP 327 Query: 172 RENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 R + + + ++ +K G LE SN + E+ MI + + + + Sbjct: 328 RAGNVFTTSAESGDIQIGFAGQGGRGILKAGALEQSNVDVSTELTTMIESQTVYTANSKV 387 Query: 227 IDENEKSMLEAIR 239 + + + Sbjct: 388 FMTGNELLETLMN 400 >gi|34558066|ref|NP_907881.1| flagellar hook protein FlgE [Wolinella succinogenes DSM 1740] gi|34483784|emb|CAE10781.1| FLAGELLAR HOOK PROTEIN FLGE [Wolinella succinogenes] Length = 745 Score = 80.7 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 36/150 (24%), Positives = 59/150 (39%), Gaps = 22/150 (14%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56 M + GL+ L + L +V++N++N +T G+R +F + + I+ Sbjct: 1 MNATLFNGLSGILTHQVGLDSVSNNIANVNTTGYRANIPQFETLFAKSMSYINSSSPINN 60 Query: 57 ---SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---------------RGI 98 V +S + GS+ S+ E D A G WF + + + Sbjct: 61 DFEHGVTVSSNAISNKNGSYKSSDGEFDIAYAGKGWFVVGTQKSGSFDLQNPTVAATQKN 120 Query: 99 ILTRDGRFKVTDDGSLVSASGKYPVLDMAS 128 TRDG F +G LV+ASG Y Sbjct: 121 YFTRDGSFSRDSEGYLVNASGYYLYGIDLG 150 Score = 58.7 bits (140), Expect = 7e-07, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 34/105 (32%), Gaps = 17/105 (16%) Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPN-----------------IPPTPLEDLSGVT 193 K +V+ +GL + QG + + + L Sbjct: 637 KSEVMGRVGLAAFVNDQGLQKVGGNMFQMTSISVNGGQPVYSSGAPILAWDETGQLKFGK 696 Query: 194 VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 V LE SN + + ++I L + ++ ++ + EAI Sbjct: 697 VLDSMLETSNVDIGAALTELIVLQRGYSFNAKAFTTGDELIKEAI 741 >gi|144900453|emb|CAM77317.1| Flagellar hook protein FlgE [Magnetospirillum gryphiswaldense MSR-1] Length = 693 Score = 80.7 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 35/177 (19%), Positives = 64/177 (36%), Gaps = 6/177 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + G++ + + ++DN+SN +TVG++ +V F +V + V S Sbjct: 6 ALFSGVSGLASQSSAMGAISDNISNVNTVGYKGARVNFQTLVTKQTSITAYSPGGVQSKP 65 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALE------SPRGIILTRDGRFKVTDDGSLVSA 117 G +T + D + G +F + + TR G FKV +G L + Sbjct: 66 RQGVDVQGLLQATNSSTDIGMSGQGFFIVNEAARPENGDMFAYTRAGSFKVDSEGYLQNV 125 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174 SG Y Q ++ + K T+ + +S +R N Sbjct: 126 SGWYMQGWPLMSWDNSQQASQVTVGNNVFMKAYKDDTGNTVYINDNVVSADHLRPLN 182 Score = 65.3 bits (157), Expect = 6e-09, Method: Composition-based stats. Identities = 12/93 (12%), Positives = 30/93 (32%), Gaps = 5/93 (5%) Query: 152 GKVIATMGLYSVDMSQGFVRRENS-GISPNIPPTPLEDL----SGVTVKRGFLEDSNANS 206 + + + + + G + I + P + LE S + Sbjct: 598 TRAVFQIPVATFVNPNGMQSLSGNVFIGTDFSGEPTLRGAGSAGAGQINASSLEASTVDI 657 Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E MI + +++ +I ++ + E +R Sbjct: 658 GEEFTTMIVTQRAYSAAAKIITTADEMLDELVR 690 >gi|212709492|ref|ZP_03317620.1| hypothetical protein PROVALCAL_00534 [Providencia alcalifaciens DSM 30120] gi|212687830|gb|EEB47358.1| hypothetical protein PROVALCAL_00534 [Providencia alcalifaciens DSM 30120] Length = 422 Score = 80.7 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 38/98 (38%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISP-NIPPTPLE----DLSGVTVKRGFLED 201 +Q+ +V+ + L + G V + + + N P++ + G LE Sbjct: 323 YSNQQKRVVGQIALSAFANPNGLVSQGGNVWAASNASGNPMDGVPGVGQFGKLTSGALES 382 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ MI + + + S I ++ + + Sbjct: 383 SNVDMSQELISMIVMQRNYQSNAQTIKTQDQMLQTLVN 420 Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 28/129 (21%), Positives = 53/129 (41%), Gaps = 6/129 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SF+ ++ A L ++ +N++N+ T GF+ F+++ + V Sbjct: 2 SFSQAVSGLNAASAGLDSIGNNIANSATNGFKGATTSFADMFAGSGVGL-----GVNVAA 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 + + G T D A+ G+ +F + + +RDG+F G+LV+ G Sbjct: 57 VTQNFKDGPITRTDRATDVAISGNGFFRVQDQNGDVYYSRDGQFLRDKSGNLVNNQGMVV 116 Query: 123 VLDMASVPI 131 ASV Sbjct: 117 TGYPASVDD 125 >gi|90422624|ref|YP_530994.1| flagellar hook protein FlgE [Rhodopseudomonas palustris BisB18] gi|90104638|gb|ABD86675.1| flagellar basal body FlaE [Rhodopseudomonas palustris BisB18] Length = 411 Score = 80.7 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 2/123 (1%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 G + A +LS VADN++N +T G++ +FS ++ + V + Sbjct: 7 MRTGGSGMTAQSNKLSAVADNIANVNTTGYKRASTEFSSLILKSGS-GSYNSGSVETQVR 65 Query: 65 YLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGKYPV 123 Y + G+ T + D A++G+ +FA+ + G LTR G F G+L +A+G Y + Sbjct: 66 YAISDPGTLQYTTSATDLAIQGNGFFAVSNAGGTPFLTRAGSFVPDGQGNLYNAAGYYLM 125 Query: 124 LDM 126 Sbjct: 126 GYN 128 Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 30/183 (16%), Positives = 51/183 (27%), Gaps = 9/183 (4%) Query: 66 LSKEVGSFISTGTELDFALEGDAWFALESPRGIILT--RDGRFKVTDDGSLVSASGKYPV 123 + D + G A SP + LT F + A+ Sbjct: 226 FPYTGAPLATGNFSFDVSATGKGRLAGGSPTSLSLTIPNGSPFTLDLSSMTQVAADFQFK 285 Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLY--SVDMSQGFVRRENSGISPNI 181 + K E+ G I G IAT + +V V + S I Sbjct: 286 ATVDGNSPSSIDKVEVATDGTMYAIYNDGTRIATYKIPLATVPSPDNLVPEVGNVYSIGI 345 Query: 182 PPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 ++ VK LE SN + E+ MI + + + + + + Sbjct: 346 NSGNVQVDFAGHSGLGIVKAEALEASNVDLANELTAMIESQRGYTANSKVFQTGADLLDV 405 Query: 237 AIR 239 + Sbjct: 406 LVN 408 >gi|186477697|ref|YP_001859167.1| flagellar basal body FlaE domain-containing protein [Burkholderia phymatum STM815] gi|184194156|gb|ACC72121.1| flagellar basal body FlaE domain protein [Burkholderia phymatum STM815] Length = 501 Score = 80.7 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 30/192 (15%), Positives = 67/192 (34%), Gaps = 2/192 (1%) Query: 8 GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVASGKEY 65 GL+ L + +N++N +TVGF+ +F+++ +Q + Sbjct: 6 GLSGLAGASSDLDVIGNNIANANTVGFKQGAAQFADMYANSVATAVNNQIGIGTRMSQVE 65 Query: 66 LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125 + G+ + L A+ G +F + + + +R+G F++ +G + +A G + Sbjct: 66 QNFSQGTISTDDIALHVAINGSGFFQMSNNGALTYSRNGVFQLDKNGYITNADGLKLMGY 125 Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185 A+ I + I T GL + + + + Sbjct: 126 AANANGIINTAGTVPLQVPTANIPPTATKTITAGLNLNAQDALKLGTPSVTFTTSTGSLT 185 Query: 186 LEDLSGVTVKRG 197 +S +G Sbjct: 186 NNGVSITDATQG 197 Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 12/125 (9%), Positives = 33/125 (26%), Gaps = 5/125 (4%) Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 D + + + + + + L + G + N+ Sbjct: 376 NSLTQDGFAAGQLTNFTVGTDGIITGNYSNGQTAALGQVALATFANQNGLINLGNNQFQA 435 Query: 180 NIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 + +++ G E+SN + E+ +I + + + I + Sbjct: 436 TAASGVAVVAAPGSTNHGSLQGGATENSNVDLTSELVNLITAQRNYQANAQTIKTQQTVD 495 Query: 235 LEAIR 239 I Sbjct: 496 QTLIN 500 >gi|225871934|ref|YP_002753388.1| flagellar hook protein flgE [Acidobacterium capsulatum ATCC 51196] gi|225793054|gb|ACO33144.1| flagellar hook protein flgE [Acidobacterium capsulatum ATCC 51196] Length = 409 Score = 80.7 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 36/157 (22%), Positives = 62/157 (39%), Gaps = 6/157 (3%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ-----KI 56 +SF+I L A L T+A+N+SN +T F++ + F ++ + Sbjct: 1 MSSFSIPLTGLEASSTSLDTIANNLSNMNTTAFKSQQASFGDLFYQQIGNSGSGDPLEVG 60 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLV 115 + V + G+ TG D AL G +F + + G TRDG F +T G L Sbjct: 61 AGVQVAATNTNFTQGTVSETGNATDVALNGSGFFVVRNSDGTPAYTRDGNFTLTSSGDLT 120 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG 152 + G+ + A+ + G++ Q Sbjct: 121 TQGGQAVMGYPAANGVVNTNSALSPIQIPVGQVEQPQ 157 Score = 61.4 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 14/96 (14%), Positives = 31/96 (32%), Gaps = 5/96 (5%) Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNAN 205 + + + + L S+ QG + + TV+ LE SN N Sbjct: 313 QTQAVGQLALASITNEQGLQLDGGNLYQTTLASGSASIGLAGSAGLGTVQDSALEGSNVN 372 Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 E ++ + + + + ++ + I I Sbjct: 373 ISTEFSNLVVAQNAYEASSKALTTFDQVAQDTINII 408 >gi|195953027|ref|YP_002121317.1| protein of unknown function DUF1078 domain protein [Hydrogenobaculum sp. Y04AAS1] gi|195932639|gb|ACG57339.1| protein of unknown function DUF1078 domain protein [Hydrogenobaculum sp. Y04AAS1] Length = 583 Score = 80.3 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 39/213 (18%), Positives = 83/213 (38%), Gaps = 13/213 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ------ 54 M SF ++ A LS +++NMSN DT+G++ + F VV + I+ Sbjct: 1 MLPSFYNAISGLDAFNNYLSIISNNMSNADTIGYKAVNPIFENVVANVNVGINTLTDTLK 60 Query: 55 ---KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR---GIILTRDGRFKV 108 + V L+ ++G+F TG D A++G+ F L+ P + TR+G+F + Sbjct: 61 STIYGAGVIVDSTQLNWQLGNFEQTGNNTDLAIQGNGLFILQDPANAGNVFYTRNGQFTI 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 + G +V+ G + + + + +I +++ + Sbjct: 121 SQQGYMVNPDGLKLLGYKVDQSGSVVGTSLQPIYIIPQQPPKATDLITYQQPTNLNSTAP 180 Query: 169 FVRRENSGISPNIPPTPLEDLSGVTVKRGFLED 201 + + + ++ + T+ +E Sbjct: 181 SITQAFNPLNTATFNYQNTLTTFDTL-GNAIEG 212 Score = 68.4 bits (165), Expect = 8e-10, Method: Composition-based stats. Identities = 16/137 (11%), Positives = 44/137 (32%), Gaps = 4/137 (2%) Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162 + ++AS L + + V G+ + + + L Sbjct: 447 NSYITQDASDFTITASQDGYSLGNLVNVYVLSSDGTVVGVYSNGQST----PLYRVALAQ 502 Query: 163 VDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222 + + ++ + PT L S ++ G LE SN + Q++ + + + Sbjct: 503 FQDPNELIEKGSNLYTSIYTPTILLPGSADIIQSGMLEQSNVDIAQAYIQLVTAERSYQA 562 Query: 223 ITTLIDENEKSMLEAIR 239 ++ ++ + + Sbjct: 563 NAKVVTSSDNVLQATLN 579 >gi|303249022|ref|ZP_07335267.1| fagellar hook-basal body protein [Desulfovibrio fructosovorans JJ] gi|302489608|gb|EFL49548.1| fagellar hook-basal body protein [Desulfovibrio fructosovorans JJ] Length = 519 Score = 80.3 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 27/134 (20%), Positives = 58/134 (43%), Gaps = 6/134 (4%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---DIDQKISF 58 ++ G++ L+ ++ +N++NT T G+++ ++ F++++ + D Q + Sbjct: 1 MSAIWTGVSGLLSYSTGIANTGNNLANTGTTGYKSSRLLFADMISEMAGGTSDGSQIGTG 60 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFAL---ESPRGIILTRDGRFKVTDDGSLV 115 V G ++ GS IS +D A+ G+ + + TRDG F +G L Sbjct: 61 VQVGSVSMTTSTGSPISASQSMDMAINGERGYFVVKKPGTDKTYYTRDGAFNFDVNGYLT 120 Query: 116 SASGKYPVLDMASV 129 + +G Sbjct: 121 TETGLNVQGWAVDQ 134 Score = 74.9 bits (182), Expect = 8e-12, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 40/120 (33%), Gaps = 5/120 (4%) Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183 D + + + V + + + +GL R N+ +S Sbjct: 396 QDGYASGTLLSTSVDENGVISGTFSNGQTIELFVVGLADFVNPTDLYREGNNLLSATKES 455 Query: 184 TPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 +V LE SN + EM +I L + F S + ++ ++ M +A+ Sbjct: 456 GDASLGRANSGVFDSVSGYTLESSNVDMATEMVNLITLQRAFQSNSKVVTTADEMMQKAL 515 >gi|240137257|ref|YP_002961726.1| flagellar hook protein FlgE [Methylobacterium extorquens AM1] gi|240007223|gb|ACS38449.1| flagellar hook protein FlgE [Methylobacterium extorquens AM1] Length = 403 Score = 80.3 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 65/181 (35%), Gaps = 1/181 (0%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 G++ A R+STVA+N+ N T G++ +FS ++ + + V + Sbjct: 7 LRTGVSGMNAQSNRISTVAENIQNASTTGYKRTSAEFSSLLLDSGDVGNYNSGAVETTLR 66 Query: 65 YLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYPV 123 E G ST ++ D A++G+ +F + +TR G F V + +G + + Sbjct: 67 RSVSEGGPIASTNSDKDLAIQGNGFFVVSDAAGAPFMTRAGNFVVDGKTGNLVNAGGFTL 126 Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183 + + + +S G+ +V + F + Sbjct: 127 MGYSLANGTPNPVLNGVADLKPVNVSVMGQEARPSTAATVSGNLSFETPVYDPTATGAIG 186 Query: 184 T 184 Sbjct: 187 Y 187 Score = 62.6 bits (150), Expect = 5e-08, Method: Composition-based stats. Identities = 18/193 (9%), Positives = 43/193 (22%), Gaps = 7/193 (3%) Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113 Q A+ + + + +G+ + + V G Sbjct: 208 QMTKTAANTWSVEFFDPAAPTTPVGTTSVTFDGNGKVNGGGSALVAVPNGRSITVDLGGL 267 Query: 114 LVSASGKYPVLDMAS--VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171 + K + L V Sbjct: 268 TQLSGDHNLSGTANGSSPTSVSGTAFGEDGTVYAVYTDGTRKAAFKVPLADVASPDNLAP 327 Query: 172 RENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 R + + + ++ +K G LE SN + E+ MI + + + + Sbjct: 328 RAGNVFTTSAESGDIQVGFAGQGGRGILKAGALEQSNVDVSTELTTMIESQTVYTANSKV 387 Query: 227 IDENEKSMLEAIR 239 + + + Sbjct: 388 FMTGNELLETLMN 400 >gi|83591885|ref|YP_425637.1| hypothetical protein Rru_A0546 [Rhodospirillum rubrum ATCC 11170] gi|83574799|gb|ABC21350.1| conserved hypothetical protein [Rhodospirillum rubrum ATCC 11170] Length = 661 Score = 80.3 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 37/168 (22%), Positives = 62/168 (36%), Gaps = 7/168 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + G++ A L +ADN++N +TVG++ KV F +V + V S Sbjct: 6 ALFSGVSGLQAQSSALGAIADNVTNVNTVGYKGTKVNFQTLVTQQVSLTAYSPGGVQSKP 65 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWF----ALESPRGIILTRDGRFKVTDDGSLVSASG 119 G +T + D + G +F P G +R G FKV DG L+++ G Sbjct: 66 RTGVDVQGLLQATTSSTDIGISGQGFFVVSGQAIDPTGYAYSRAGSFKVDKDGYLMNSGG 125 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 Y V + G + K + Y ++ + Sbjct: 126 YYMQGW---PLDNWDGTAAASTVTKNGNVYMKSYKTGSGDTYYINPNA 170 Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 29/93 (31%), Gaps = 5/93 (5%) Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLEDSNANS 206 I + + + G + + S TV + LE S + Sbjct: 566 TTPIFMIPIATFVNPNGMNSLSGNVFQETDNSGLPTVRAAGEASAGTVNQATLEASTVDL 625 Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E MI + +++ +I + + E IR Sbjct: 626 GSEFTNMITTQRAYSAAAKIITTADDMLDELIR 658 >gi|328542111|ref|YP_004302220.1| flagellar hook-basal body protein [polymorphum gilvum SL003B-26A1] gi|326411861|gb|ADZ68924.1| Flagellar hook-basal body protein [Polymorphum gilvum SL003B-26A1] Length = 545 Score = 80.3 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 32/139 (23%), Positives = 54/139 (38%), Gaps = 6/139 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + + G++ +A LST+++N+SN +T G++ + FS +V VAS Sbjct: 6 ALSTGVSGVIAQGSSLSTISNNISNLNTPGYKGSRTLFSHMVTGGGRPGTPVSGSVASLD 65 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWF------ALESPRGIILTRDGRFKVTDDGSLVSA 117 + G+ I+T D AL G +F + R F G LVS+ Sbjct: 66 QRDLTAQGAIINTSRPADLALVGKGFFVVTDSPFVGPETSYFYQRTSSFSENTQGYLVSS 125 Query: 118 SGKYPVLDMASVPIQIPQK 136 G + +I Sbjct: 126 QGLHLQGWRTDASGEIINP 144 Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 11/82 (13%), Positives = 24/82 (29%), Gaps = 5/82 (6%) Query: 163 VDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217 G + T+ +E SN + E MI Sbjct: 462 FQDPNGLELVSGGLLREAEQSGRPFFREAGTSGTATIAPSSIEQSNVDIGTEFSNMIVSQ 521 Query: 218 QKFNSITTLIDENEKSMLEAIR 239 + +++ T +I ++ + E + Sbjct: 522 RSYSASTKVITTVDQMLNELMN 543 >gi|292487939|ref|YP_003530814.1| flagellar hook protein FlgE [Erwinia amylovora CFBP1430] gi|292899158|ref|YP_003538527.1| flagellar hook protein FlgE [Erwinia amylovora ATCC 49946] gi|291199006|emb|CBJ46117.1| flagellar hook protein FlgE [Erwinia amylovora ATCC 49946] gi|291553361|emb|CBA20406.1| Flagellar hook protein flgE [Erwinia amylovora CFBP1430] gi|312172060|emb|CBX80317.1| Flagellar hook protein flgE [Erwinia amylovora ATCC BAA-2158] Length = 402 Score = 80.3 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 28/237 (11%), Positives = 67/237 (28%), Gaps = 24/237 (10%) Query: 25 NMSNTD---TVGF--RTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTE 79 N +N + T + ++ F + + ++ A + S + G + Sbjct: 166 NYANLNINDTTTYNAKSSMTTFDSL--GNAHTVNLYFVKTADNNWTVHPVDASTGTAGAD 223 Query: 80 LDFALEGDAWFALESPRGIILTRD--------GRFKVTDDGSLVSASG----KYPVLDMA 127 + + + + T V GS +G P D Sbjct: 224 TNLVFNANGQLVTPNNGQVSFTMGQLNGSNGPTTLNVNLTGSQQQNNGKSTFGNPTQDGY 283 Query: 128 SVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPL- 186 + +++ +++ + L + +G ++ S Sbjct: 284 KPGELTSYQINDDGTLVGTYSNEQTQLLGQIVLSNFANPEGLKSEGDNVWSSTAASGQAL 343 Query: 187 ----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + T+ G LE SN + E+ MI + + S I ++ + + Sbjct: 344 SGIAGTGNLGTLTAGALESSNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400 Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 71/182 (39%), Gaps = 6/182 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 F+ ++ A L + +N+SN+ T GF++ V F+++ K + K++ V Sbjct: 2 GFSQAVSGLNAASSNLDVIGNNISNSATAGFKSSTVAFADMFAGSKVGLGTKVASV---- 57 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +T LD A+ +F + ++ G+ +R+G+F + + ++V+ G + Sbjct: 58 -VQDFNDGTTTNTSRGLDVAISSAGFFRMADANGGVFYSRNGQFTLDQNRNIVNMQGLHL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q + K T + + S V+ + + Sbjct: 117 TGYPATGTPPAVQTGANPVALSVPATAMTAKATTTAAITANLNSTDAVKNYANLNINDTT 176 Query: 183 PT 184 Sbjct: 177 TY 178 >gi|315453407|ref|YP_004073677.1| flagellar hook protein FlgE [Helicobacter felis ATCC 49179] gi|315132459|emb|CBY83087.1| flagellar hook protein, FlgE [Helicobacter felis ATCC 49179] Length = 601 Score = 80.3 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 59/146 (40%), Gaps = 22/146 (15%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + + + + +V++N++N +TVG+R +F + + N + Sbjct: 1 MNDTILNAYSGIKTHQFGIDSVSNNIANINTVGYRRNDPEFKSLFASHLNTLGGNTVTAN 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA---------------LESPRGI 98 + A+G +S + G ++ + ++ + A +G WF + + Sbjct: 61 DRNYGAAAGGNAISSKDGEYMPSDSDFNMAYQGSGWFIVGPNKNGSMQINKDGYQQAQEN 120 Query: 99 ILTRDGRFKVTDDGSLVSASGKYPVL 124 TRDG F DG +V++ G Y Sbjct: 121 FYTRDGNFLRDADGYIVNSHGYYVYG 146 Score = 66.8 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 17/141 (12%), Positives = 44/141 (31%), Gaps = 17/141 (12%) Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 + D + + + V + + + +G+ + QG + ++ Sbjct: 458 DSKIYQISQDGKPKGLLANMRIDDDGVIHLIFTNGALETMGRVGIATFINDQGLKKVGSN 517 Query: 176 ----------GISPNIPPTPLEDL-------SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 G + + P+ V +LE SN N+ + + +I + + Sbjct: 518 LFDIQNATVNGRAAPLSGNPIIGWDRDDGKLKFGKVMHKYLETSNVNAGHSLTNLILMQR 577 Query: 219 KFNSITTLIDENEKSMLEAIR 239 ++ + + EAI Sbjct: 578 GYSMNAKAFTTGDDLIKEAIN 598 >gi|167644975|ref|YP_001682638.1| hypothetical protein Caul_1010 [Caulobacter sp. K31] gi|167347405|gb|ABZ70140.1| protein of unknown function DUF1078 domain protein [Caulobacter sp. K31] Length = 556 Score = 80.3 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 56/135 (41%), Gaps = 7/135 (5%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 ++ G++ ++ L+ ++DN++N +TVG++ FS +V A V + Sbjct: 4 NSAMLAGVSGLISNSSALAAISDNIANVNTVGYKRSSANFSTLVTAQSKSATYSAGGVKA 63 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-------IILTRDGRFKVTDDGSL 114 + G ST + LD ++ G +F TR G F++ + G L Sbjct: 64 QTHQFVSQQGLTQSTTSNLDLSIAGSGFFVGTEKPEGLTATDTRSFTRAGSFQLDNLGYL 123 Query: 115 VSASGKYPVLDMASV 129 + +G Y +A Sbjct: 124 KNDAGLYLQGWLADP 138 Score = 71.1 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 10/90 (11%), Positives = 28/90 (31%), Gaps = 5/90 (5%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYE 209 IA + + + G + ++ LE S + E Sbjct: 464 IAQVAIATFSNPNGLKGVNGNAYRVTNESGTYSLKTPGGGGAGSIAPSTLEASTVDLSTE 523 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +I + +++ + +I ++ + E + Sbjct: 524 FTGLITTQRAYSASSKIITTADQMLEELLS 553 >gi|194428463|ref|ZP_03061003.1| flagellar hook protein FlgE [Escherichia coli B171] gi|194413515|gb|EDX29797.1| flagellar hook protein FlgE [Escherichia coli B171] Length = 396 Score = 80.3 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 71/195 (36%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ +LV+ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q+ K T + S + + N Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNAD 176 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 177 SYNKKGSVTVFDSQG 191 >gi|114707045|ref|ZP_01439944.1| flagellar hook protein E [Fulvimarina pelagi HTCC2506] gi|114537595|gb|EAU40720.1| flagellar hook protein E [Fulvimarina pelagi HTCC2506] Length = 390 Score = 80.3 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 34/160 (21%), Positives = 61/160 (38%), Gaps = 4/160 (2%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66 ++ A +LS V+DN++N+ T G++ V+FS +V + V S Y Sbjct: 9 TSVSGMNAQSNKLSAVSDNIANSATTGYKRADVEFSSLVINSGGRGNYTSGSVLSQTRYD 68 Query: 67 SKEVGSFISTGTELDFALEGDAWF-ALESPRGIILTRDGRF---KVTDDGSLVSASGKYP 122 G +T ++ D A+ GD +F + TR G F D G + Sbjct: 69 ISTQGLVTTTSSKTDLAISGDGFFVVEDQNGQPFFTRAGSFVQRTEPDTGETFLVNAAGY 128 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162 L + P+Q+P + + + G ++ Sbjct: 129 KLTGQNGPVQVPVGEIVAPQATTTSELSMQLPLNGTGTHT 168 Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 10/96 (10%), Positives = 28/96 (29%), Gaps = 5/96 (5%) Query: 149 SQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSN 203 + + + + L + P+ + + G LE+SN Sbjct: 292 TGRQIELDRIQLARFQSPDQLDVISGNVFRPSQLSGDPQFGFSGELGFGDLISGALEESN 351 Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + E+ MI + + + + + + + Sbjct: 352 VDLASELTDMIVTQRSYAANSKTFQTGSEMLDLLVN 387 >gi|161777623|ref|YP_427619.2| flagellar hook protein FlgE [Rhodospirillum rubrum ATCC 11170] Length = 460 Score = 80.3 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 28/127 (22%), Positives = 55/127 (43%), Gaps = 3/127 (2%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 +S N+ ++A A +S +++N++N+ T+G++T F +V + + + V + Sbjct: 6 SSLNVAVSAMNAQSSSVSAISNNLANSSTIGYKTSNASFYSLVTGTGSTSNFTGAGVVAS 65 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALES---PRGIILTRDGRFKVTDDGSLVSASG 119 G + T D A++G F + + TR G F DG LV+++ Sbjct: 66 ATQNVINQGVIVGTQNVTDLAVDGKGMFIVTDRSGSNELYYTRAGDFYPNADGDLVNSNN 125 Query: 120 KYPVLDM 126 Y Sbjct: 126 YYLQGYP 132 >gi|149195336|ref|ZP_01872423.1| flagellar hook protein [Caminibacter mediatlanticus TB-2] gi|149134528|gb|EDM23017.1| flagellar hook protein [Caminibacter mediatlanticus TB-2] Length = 634 Score = 80.3 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 29/171 (16%), Positives = 62/171 (36%), Gaps = 4/171 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK---IS 57 M TSF G++ ++ + L DN++N +T GF+ +F+ + ++ Sbjct: 1 MTTSFYNGVSGLISFQNGLDIWGDNIANINTPGFKESIPEFATIFSQTLSNASPTSDIGL 60 Query: 58 FVASGKEYLSKEVGSFISTGTELDFALEGDA-WFALESPRGIILTRDGRFKVTDDGSLVS 116 +G+ + + D A+ + + + TR+G F +G LV+ Sbjct: 61 GSLLHSTAKDMSIGNIVDSDNPFDIAIADEKGFLGVSYNGETFYTRNGNFTRDANGFLVN 120 Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 SG Y ++ A+ I+ + + +V + Sbjct: 121 DSGAYLLVANANNLIKTENGYIVNRDINTDNLLPTNTFSPISLPNNVILPA 171 Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 18/203 (8%), Positives = 52/203 (25%), Gaps = 6/203 (2%) Query: 43 EVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTR 102 + + N + + + + + T DF + + + Sbjct: 429 DKIPVTINFTKKSVLNNTTIWKGTISINTPTQNITTTQDFTFDSNGFLLSPKEISFNNIN 488 Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162 + + +A+ D + + + + + ++ Sbjct: 489 FRFNISSFAKTDTNATNYSFNQDGVEEGFLQNYQIDENGKIIGIFSNNQDITFGQIPIFH 548 Query: 163 VDMSQGFVRRENSGISPNIPPT------PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 QG ++ + LE SN N M ++I Sbjct: 549 FQNPQGLENIGSNLFRETSNSNKAFLYTNENGSYIGKLLPSKLETSNVNMSQAMTELIVT 608 Query: 217 TQKFNSITTLIDENEKSMLEAIR 239 + F + + +++ + +AI Sbjct: 609 QKAFQASAKTVTTSDEMIQKAIN 631 >gi|227874517|ref|ZP_03992687.1| flagellar basal body rod protein FlgG [Oribacterium sinus F0268] gi|227839636|gb|EEJ50096.1| flagellar basal body rod protein FlgG [Oribacterium sinus F0268] Length = 305 Score = 80.3 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 38/306 (12%), Positives = 81/306 (26%), Gaps = 99/306 (32%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50 M + + +A A + +L + +N++N +T GF++ F + + + Sbjct: 1 MLRAMDSAVAGLRAHQNKLDVIGNNIANVNTFGFKSQGYSFKDTMYQTSSTSSGGKQEAS 60 Query: 51 --------DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI---- 98 + Q +G + G + ++ G +F + Sbjct: 61 GNATIGGANPAQYGYGSLTGSIATDFTSSTPSYVG-GFNASINGSGFFVTSASNKEVTLD 119 Query: 99 ----------------ILTRDGRFKVTDDGSLVSASGKYPVL------------------ 124 TR G+F V +G +V A+ + Sbjct: 120 PANTKTTTAEMKKNNFAYTRVGQFSVDANGYIVDANHNFVYGFQPDSLTEPTKYGDGGKK 179 Query: 125 -----------------------------------DMASVPIQIPQKDEIFNVGEKGEIS 149 + I G +++ Sbjct: 180 LVALRAPAADNTGAVALTGSPVFTGFAAQLKSVEIGADGIVKGIIDNKTPGTGGAPAQVT 239 Query: 150 QKGKVIATMGLYSVDMSQGFVRRENSGISP-------NIPPTPLEDLSGVTVKRGFLEDS 202 V+ + + S +G + N+ + I T + S T+ G+LE S Sbjct: 240 STSIVLGKVAVASFQNQEGLTKAGNNTFNAGVGDNTGYISATMPGEGSTPTLMAGYLEAS 299 Query: 203 NANSMY 208 N + Sbjct: 300 NVDLAK 305 >gi|163793271|ref|ZP_02187246.1| flagellar basal body FlaE domain protein [alpha proteobacterium BAL199] gi|159181073|gb|EDP65588.1| flagellar basal body FlaE domain protein [alpha proteobacterium BAL199] Length = 433 Score = 80.3 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 31/186 (16%), Positives = 69/186 (37%), Gaps = 7/186 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 G++A A Q ++DN++N +T+G++ +F +V + V + Sbjct: 6 GMFSGVSALAAQSQAFGIISDNIANVNTIGYKDTTARFQTLVTESSSSSRYSPGGVLARP 65 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-------ILTRDGRFKVTDDGSLVS 116 ++ G T + D +L GD +F + +LTR G F ++G+LV+ Sbjct: 66 FVNPEKQGLLQGTTSNTDISLVGDGFFIVNENDDPLTSGGEYLLTRAGSFTEDEEGNLVN 125 Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 A+G + I + + ++ G + + +++ + Sbjct: 126 AAGFFLQGWRTDSTGTIVNSNTKDQLSSLETVNLAGFTSVSNPSSTANLAVNLPANATTA 185 Query: 177 ISPNIP 182 + Sbjct: 186 STQTTN 191 Score = 61.8 bits (148), Expect = 7e-08, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 22/50 (44%) Query: 190 SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 ++ LE S + E +I + +++ T LI ++ + E IR Sbjct: 381 GAGAIESSALEQSTVDLSDEFTDLIITQRAYSAATKLITTGDELLDEIIR 430 >gi|94312669|ref|YP_585878.1| flagellar hook protein [Cupriavidus metallidurans CH34] gi|93356521|gb|ABF10609.1| flagellar hook protein [Cupriavidus metallidurans CH34] Length = 415 Score = 80.3 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 40/161 (24%), Positives = 66/161 (40%), Gaps = 7/161 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 F G++ A L + +N++N +TVGF+ +F++V K + +++ V Sbjct: 2 GFGQGVSGLNAAASNLDVIGNNIANANTVGFKQSTAQFADVYAGSKIGLGTRVNSV---- 57 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFAL--ESPRGIILTRDGRFKVTDDGSLVSASGKY 121 S G+ STG LD A+ F + G+ +R+G+F+ DDG LV+ASG Sbjct: 58 -VQSFTNGNISSTGRNLDVAISNGNGFFRLASTDGGVYYSRNGQFQRLDDGRLVNASGLQ 116 Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162 A I + + A L S Sbjct: 117 VTGYPAGTTAGGVAPQPIVISNAQMPPQATTNIKAQFQLDS 157 Score = 72.2 bits (175), Expect = 6e-11, Method: Composition-based stats. Identities = 13/97 (13%), Positives = 36/97 (37%), Gaps = 4/97 (4%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPL----EDLSGVTVKRGFLEDS 202 +++ K + + + + ++G N+ S S T++ G +E+S Sbjct: 318 FSNEQTKSLGQIAMAAFGNAEGLKPEGNNVWSATGASGQELLGVAGGSMGTLQSGSVEES 377 Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 N + ++ +I + + + I + M + Sbjct: 378 NVDLSGQLVNLIVAQRNYQANAQTIKAQDTVMQTLVN 414 >gi|163850123|ref|YP_001638166.1| flagellar hook protein FlgE [Methylobacterium extorquens PA1] gi|163661728|gb|ABY29095.1| protein of unknown function DUF1078 domain protein [Methylobacterium extorquens PA1] Length = 403 Score = 79.9 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 65/181 (35%), Gaps = 1/181 (0%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 G++ A R+STVA+N+ N T G++ +FS ++ + + V + Sbjct: 7 LRTGVSGMNAQSNRISTVAENIQNASTTGYKRTSAEFSSLLLDSGDVGNYNSGAVETTLR 66 Query: 65 YLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYPV 123 E G ST ++ D A++G+ +F + +TR G F V + +G + + Sbjct: 67 RSVSEGGPIASTNSDKDLAIQGNGFFVVSDAAGAPFMTRAGNFVVDGKTGNLVNAGGFTL 126 Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183 + + + +S G+ +V + F + Sbjct: 127 MGYSLANGTPNPVLNGVADLKPVNVSVMGQEARPSTAATVSGNLSFETPVYDPTATGAIG 186 Query: 184 T 184 Sbjct: 187 Y 187 Score = 61.8 bits (148), Expect = 7e-08, Method: Composition-based stats. Identities = 18/193 (9%), Positives = 45/193 (23%), Gaps = 7/193 (3%) Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113 Q A+ + + ++ + +G+ + + V G Sbjct: 208 QMTKTAANTWSVEFFDPAAPTTSLGTTNVTFDGNGKVNGGGSALVNVPNGRSIPVDLGGL 267 Query: 114 LVSASGKYPVLDMAS--VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171 + K + L V Sbjct: 268 TQLSGDHNLSGTANGSSPTSVSGTAFGEDGTVYAVYTDGTRKAAFKVPLADVASPDNLAP 327 Query: 172 RENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 R + + + ++ +K G LE SN + E+ MI + + + + Sbjct: 328 RAGNVFTTSAESGDIQVGFAGQGGRGILKAGALEQSNVDVSTELTTMIESQTVYTANSKV 387 Query: 227 IDENEKSMLEAIR 239 + + + Sbjct: 388 FMTGNELLETLMN 400 >gi|74101658|gb|AAZ99748.1| FlgEL [Aeromonas hydrophila] Length = 397 Score = 79.9 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 34/147 (23%), Positives = 60/147 (40%), Gaps = 6/147 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SF+IGL+ A+ Q LS +++N++N T GF++ + +F+ + Q + Sbjct: 2 SFSIGLSGLRAVNQELSVISNNVANASTAGFKSSRAEFAAIY-----GGGQAGGVEMNNV 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASGKYP 122 G TG LD A+ G +F L+ TR G F+ + L +ASG Sbjct: 57 SQNFDRNGDVTRTGRGLDLAISGSGFFVLKDSNGQTSYTRAGMFQRDPNNYLTTASGTRL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEIS 149 + ++ + G + Sbjct: 117 QGYTTNDAGELQSGVVGDIQVKAGSLP 143 Score = 68.0 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 10/94 (10%), Positives = 29/94 (30%), Gaps = 5/94 (5%) Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNAN 205 + + + + + G ++ N+ + + T + G E SN + Sbjct: 302 QSLLQGQVVMANFTNPNGLMQTNNTTWQQSFSSGQPVLGAPGTGTMGSLTAGAYESSNVD 361 Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E+ ++ + + + I +K Sbjct: 362 LTGELVSLMTSQRNYQANAKTISSADKMTQVLFN 395 >gi|23008562|ref|ZP_00049955.1| COG4786: Flagellar basal body rod protein [Magnetospirillum magnetotacticum MS-1] Length = 126 Score = 79.9 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 27/125 (21%), Positives = 51/125 (40%), Gaps = 15/125 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------ 55 + I A + L +A+N++N +T GF+ + +F++++ + Sbjct: 1 MRALAIAATGMSAQQLNLEVIANNIANLNTTGFKGARAEFTDLLYQAERQQGVPNQAGQE 60 Query: 56 --------ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRF 106 V + GS +TG +LD A+ G +F + SP G + TR G F Sbjct: 61 AVPEGAMLGLGVRAAAIRNLHRQGSLANTGNQLDLAVNGRGYFQITSPAGEVNYTRAGSF 120 Query: 107 KVTDD 111 ++ Sbjct: 121 NKNNN 125 >gi|330975976|gb|EGH76042.1| flagellar hook protein FlgE [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 442 Score = 79.9 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 52/134 (38%), Gaps = 4/134 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA----IKNDIDQKISFV 59 SFNIGL A + L +N++N T GF++ + +F++ + + Sbjct: 2 SFNIGLCGLYAANKSLDVTGNNIANVATTGFKSSRAEFADQYAQSIRGTSGNTNVGSGVR 61 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119 + + T LD A+ GD +F + + + TR G F +G +V++S Sbjct: 62 TAAVSQQFSQGSLTTGTANSLDLAINGDGFFMMSNNGEKLYTRAGAFHTDKEGYVVNSSN 121 Query: 120 KYPVLDMASVPIQI 133 + Sbjct: 122 MKLQGYNVDANGSV 135 Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 30/98 (30%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLED 201 + K +VI L S QG + + + + + LE+ Sbjct: 343 YTNGKSQVIGQTSLTSFANVQGLAQAGGTNWRETFASGVPVSGAPQSGTLGYITGQALEE 402 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ +I + + I M I+ Sbjct: 403 SNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQTTIQ 440 >gi|239906013|ref|YP_002952752.1| flagellar hook protein FlgE [Desulfovibrio magneticus RS-1] gi|239795877|dbj|BAH74866.1| flagellar hook protein FlgE [Desulfovibrio magneticus RS-1] Length = 550 Score = 79.9 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 31/139 (22%), Positives = 54/139 (38%), Gaps = 17/139 (12%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---DIDQKISFVA 60 S G++ LA ++ T+ +N++N +T GF+ + F +++ A + Q V Sbjct: 8 SMWSGVSGLLANSTKMGTIGNNLANVNTYGFKGARTDFMDLMSANVGTAAGVKQIGRGVR 67 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI--------------ILTRDGRF 106 G G +T LD A+ G+ +F ++ + TR G F Sbjct: 68 VGTIVSDYSQGGLETTSENLDMAISGNGFFMVKQKSQVGSNGKMLNTGNTTTYYTRAGDF 127 Query: 107 KVTDDGSLVSASGKYPVLD 125 DG LV+ G Sbjct: 128 SFDSDGYLVTPQGLAVQGW 146 Score = 75.7 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 27/213 (12%), Positives = 60/213 (28%), Gaps = 10/213 (4%) Query: 32 VGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA 91 G+ F V A D ++ + + + A Sbjct: 340 NGYPVFTANFKSVSDASFTDSPNALNIAFNVGISNTTGFQPGATGTLLSAAAAHDPDELV 399 Query: 92 LESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQK 151 +P + S V +S + + + + + + Sbjct: 400 SFNPSTTKVNSTVTTSYATSSSTVFSSQN-----GYTSGLLTSVSVDSDGILTGTFSNGQ 454 Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANS 206 + + + L + QG R+ ++ + + S ++ LE SN + Sbjct: 455 TQKLWALALANFTNLQGLSRQGSNLYAATLDSGQGTTNRANTGSVGSISGNTLETSNVDL 514 Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 EM MI + F + + I + + E I+ Sbjct: 515 ATEMVSMILTQRGFEANSKTITTVDSMLSEVIQ 547 >gi|167579488|ref|ZP_02372362.1| flagellar hook protein FlgE [Burkholderia thailandensis TXDOH] Length = 413 Score = 79.9 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 27/189 (14%), Positives = 61/189 (32%), Gaps = 2/189 (1%) Query: 8 GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVASGKEY 65 GL+ L + +N++N +TVGF+ +FS++ + Sbjct: 6 GLSGLAGASSDLDVIGNNIANANTVGFKGSTAQFSDMYANSVASAVNNPIGIGTMLASVQ 65 Query: 66 LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125 G+ S+ + L+ A+ G+ +F + + + +RDG F+ +G +V++ G + Sbjct: 66 QQFSQGTITSSTSSLNVAINGNGFFQMSNNGVLTYSRDGTFQRDKNGYIVNSQGLNLMGY 125 Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185 A I + I+ + + Sbjct: 126 QADKNGVINTAQTVPLQAPTNNIAPTATTKISGQFNLNSQDTVPTNTPFNYADSTTYNFQ 185 Query: 186 LEDLSGVTV 194 ++ Sbjct: 186 TAVQVYDSL 194 Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 16/130 (12%), Positives = 41/130 (31%), Gaps = 9/130 (6%) Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174 V+ + I ++ G+ + G+++ L + + G V N Sbjct: 287 VTNLAQDGFASGTLTTFSIGNDGKVTGNYSNGQTATLGQIV----LANFNNPNGLVNVGN 342 Query: 175 SGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 + + + T++ LE+SN + ++ +I + + + I Sbjct: 343 NQYVETAASGVPQISAPGSTNHGTLQGSALENSNVDLTSQLVNLITAQRNYQANAQTIKT 402 Query: 230 NEKSMLEAIR 239 + I Sbjct: 403 QQTVDQTLIN 412 >gi|239817165|ref|YP_002946075.1| flagellar basal body FlaE domain protein [Variovorax paradoxus S110] gi|239803742|gb|ACS20809.1| flagellar basal body FlaE domain protein [Variovorax paradoxus S110] Length = 404 Score = 79.9 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 33/99 (33%), Gaps = 6/99 (6%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI------PPTPLEDLSGVTVKRGFLE 200 +++ ++ + L S G + + TP ++ G LE Sbjct: 304 FSNEQTTLMGQVVLTSFANPNGLEPMGENVWGETLASGQPLTGTPGAGTKQGSLASGALE 363 Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ +I + + + + ++ + I Sbjct: 364 ASNVDLTSELVNLIVAQRSYQANAQTVKTQDQVVQTLIN 402 Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 37/154 (24%), Positives = 64/154 (41%), Gaps = 7/154 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 F+ G++ A L + +N++N+ TVGF++ F +V + VA Sbjct: 2 GFSQGISGLSAAAANLDVIGNNIANSGTVGFKSGAATFQDVYA-----GSRVGLGVAVSG 56 Query: 64 EYLSKEVGSFISTGTELDFAL-EGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGKY 121 + GS ++ LD A+ GD +F L SP G + +R+G+F DG +V+A+G Sbjct: 57 IVQNFTQGSVQTSSRPLDVAILNGDGFFRLSSPSGEVMYSRNGQFTRDKDGFIVNAAGLR 116 Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI 155 S + + +S K Sbjct: 117 LTGYGVSATGGLDGGTPGPLQVQTTAMSPKATTA 150 >gi|254559268|ref|YP_003066363.1| flagellar hook protein FlgE [Methylobacterium extorquens DM4] gi|254266546|emb|CAX22310.1| flagellar hook protein FlgE [Methylobacterium extorquens DM4] Length = 403 Score = 79.9 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 65/181 (35%), Gaps = 1/181 (0%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 G++ A R+STVA+N+ N T G++ +FS ++ + + V + Sbjct: 7 LRTGVSGMNAQSNRISTVAENIQNASTTGYKRTSAEFSSLLLDSGDVGNYNSGAVETTLR 66 Query: 65 YLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYPV 123 E G ST ++ D A++G+ +F + +TR G F V + +G + + Sbjct: 67 RSVSEGGPIASTNSDKDLAIQGNGFFVVSDAAGAPFMTRAGNFVVDGKTGNLVNAGGFTL 126 Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183 + + + +S G+ +V + F + Sbjct: 127 MGYSLANGTPNPVLNGVADLKPVNVSVMGQEARPSTAATVSGNLSFETPVYDPTATGAIG 186 Query: 184 T 184 Sbjct: 187 Y 187 Score = 61.8 bits (148), Expect = 8e-08, Method: Composition-based stats. Identities = 19/193 (9%), Positives = 46/193 (23%), Gaps = 7/193 (3%) Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113 Q A+ + + ++ + +G+ + + R V G Sbjct: 208 QMTKTAANTWSVEFFDPAAPTTSLGTTNVTFDGNGKVNNGGSALVDVPNGRRITVDLGGL 267 Query: 114 LVSASGKYPVLDMAS--VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171 + K + L V Sbjct: 268 TQLSGDHNLSGTANGSSPTSVSGTAFGEDGTVYAVYTDGTRKAAFKVPLADVASPDNLAP 327 Query: 172 RENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 R + + + ++ +K G LE SN + E+ MI + + + + Sbjct: 328 RAGNVFTTSAESGDIQVGFAGQGGRGILKAGALEQSNVDVSTELTTMIESQTVYTANSKV 387 Query: 227 IDENEKSMLEAIR 239 + + + Sbjct: 388 FMTGNELLETLMN 400 >gi|311030122|ref|ZP_07708212.1| Flagellar hook protein FlgE [Bacillus sp. m3-13] Length = 493 Score = 79.9 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 25/226 (11%), Positives = 60/226 (26%), Gaps = 18/226 (7%) Query: 32 VGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA 91 F T ++ + + + + + +T D + + Sbjct: 265 TAFTTSAQNMNDGIDSFIGETGEVAYRMIDPVVQDPTIPMPTAATANVNDLSNLVSYAQS 324 Query: 92 LESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQK 151 +++ F + + I + + K + Sbjct: 325 VKTSLDTAYKTFENFIAKAEMIQQPTWTDSLSGSPGLIQIPPNARSFSISGDGKVNFIDQ 384 Query: 152 G---KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE---------------DLSGVT 193 KV + L G R + + ++ D + Sbjct: 385 FGDLKVAGQLMLAKFPNDAGLERIGENLFQQSNNSGTMDKNGDGIQLEEMFKPGDDGAAS 444 Query: 194 VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + G LE SN + E +MI + F + T +I +++ + E + Sbjct: 445 IISGTLEMSNVDLSEEFTEMITAQRGFQANTRIITTSDEILQELVN 490 Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 35/177 (19%), Positives = 62/177 (35%), Gaps = 39/177 (22%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S + A + +L + +N++N +T GF+ + F E++ + Sbjct: 1 MLRSMYSSIGALRNFQTKLDVIGNNIANVNTYGFKKGRATFQEMMVQQLSGASGPAAGKG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF------------------ 90 Q + GS +T LD AL GD +F Sbjct: 61 GVNAKQIGLGSMISTIDTIQTQGSLQTTARPLDLALSGDGFFAVASIADVTRVNVDSDTN 120 Query: 91 ---------ALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDE 138 A+ + + TR G F + ++G +V+++G Y V + I Q E Sbjct: 121 YGDNKILGGAVNNAVAMNYTRSGNFYLDNNGYIVNSNGMYMVGETGEKRIPNDQIME 177 >gi|302387788|ref|YP_003823610.1| fagellar hook-basal body protein [Clostridium saccharolyticum WM1] gi|302198416|gb|ADL05987.1| fagellar hook-basal body protein [Clostridium saccharolyticum WM1] Length = 533 Score = 79.5 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 28/155 (18%), Positives = 54/155 (34%), Gaps = 31/155 (20%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------ 48 M S G+A + ++ + +N++N +T G++ + F + + Sbjct: 1 MVKSMFAGVAGLRTHQSKMDIIGNNIANVNTWGYKAASMSFKDTMYQTTSSSSGGSTKTG 60 Query: 49 ---KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES----------- 94 + Q V +G G + LD ++G +F + Sbjct: 61 GYGGTNAGQVGYGVTTGSISYDFGKGGMAPSANGLDCMIDGTGFFIVGPMINGGSLPLGE 120 Query: 95 -----PRGIILTRDGRFKVTDDGSLVSASGKYPVL 124 G+ L+R G+F+V +G L SG Y Sbjct: 121 EDALKSSGLYLSRVGKFQVDGNGYLTDDSGNYVYG 155 Score = 71.8 bits (174), Expect = 8e-11, Method: Composition-based stats. Identities = 14/90 (15%), Positives = 33/90 (36%), Gaps = 4/90 (4%) Query: 154 VIATMGLYSVDMSQGFVRRENS----GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYE 209 V+ + L V + G + G + + + +LE + + E Sbjct: 441 VVGKIALAGVQNTGGLEKDSGYYYTLGANTGNVSVYEGGGTDGRILGNYLEQAKVDLATE 500 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 M +MI + F + + +I ++ + E + Sbjct: 501 MTEMITTQRGFQANSKIITVTDQMLDELVN 530 >gi|183598617|ref|ZP_02960110.1| hypothetical protein PROSTU_02017 [Providencia stuartii ATCC 25827] gi|188020796|gb|EDU58836.1| hypothetical protein PROSTU_02017 [Providencia stuartii ATCC 25827] Length = 406 Score = 79.5 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 39/98 (39%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISP-NIPPTPLE----DLSGVTVKRGFLED 201 +Q+ +V+ + L + G V + + +P N P++ + G LE Sbjct: 307 YSNQQKRVVGQVALSAFANPNGLVSQGGNVWAPSNASGNPMDGVPGVGQFGKLTSGALES 366 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ MI + + + S I ++ + + Sbjct: 367 SNVDMSQELINMIVMQRNYQSNAQTIKTQDQMLQTMVN 404 Score = 76.1 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 27/126 (21%), Positives = 51/126 (40%), Gaps = 6/126 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SF+ ++ A L ++ +N++N+ T GF+ F+++ + V Sbjct: 2 SFSQAVSGLNAASAGLDSIGNNIANSATNGFKGATTSFADMFAGSGVGL-----GVNVAA 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 + + G T D A+ G+ +F + I +RDG+F G+LV+ G Sbjct: 57 VTQNFKDGPITRTDRPTDVAISGNGFFRVQDQNGDIFYSRDGQFIRDKSGNLVNNQGMTV 116 Query: 123 VLDMAS 128 A Sbjct: 117 TGYPAG 122 >gi|300918678|ref|ZP_07135259.1| flagellar hook protein FlgE [Escherichia coli MS 115-1] gi|300414172|gb|EFJ97482.1| flagellar hook protein FlgE [Escherichia coli MS 115-1] Length = 401 Score = 79.5 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 34/195 (17%), Positives = 72/195 (36%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ +LV+ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q+ K T + S + + N Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNAD 176 Query: 183 PTPLEDLSGVTVKRG 197 + V V +G Sbjct: 177 SYNKKGSVTVFVSQG 191 Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + + + +++ +++ + L + ++G ++ S Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 337 Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + T+ G LE SN + E+ MI + + S I ++ + Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397 Query: 238 IR 239 + Sbjct: 398 VN 399 >gi|261344142|ref|ZP_05971786.1| flagellar hook protein FlgE [Providencia rustigianii DSM 4541] gi|282567734|gb|EFB73269.1| flagellar hook protein FlgE [Providencia rustigianii DSM 4541] Length = 422 Score = 79.5 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 38/98 (38%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISP-NIPPTPLE----DLSGVTVKRGFLED 201 +Q+ +V+ + L + G V + + + N P++ + G LE Sbjct: 323 YSNQQKRVVGQIALSAFANPNGLVSQGGNVWASSNASGNPMDGVPGVGQFGKLTSGALES 382 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ MI + + + S I ++ + + Sbjct: 383 SNVDMSQELISMIVMQRNYQSNAQTIKTQDQMLQTLVN 420 Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 51/124 (41%), Gaps = 6/124 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SF+ ++ A L ++ +N++N+ T GF+ F+++ + V Sbjct: 2 SFSQAVSGLNAASAGLDSIGNNIANSATNGFKGATTSFADMFAGSGVGL-----GVNVAA 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 + + G T D A+ G+ +F + + +RDG+F+ G+LV+ G Sbjct: 57 VTQNFKDGPITRTDRATDVAISGNGFFRVEDQNGDVFYSRDGQFQRDKSGNLVNNQGMVV 116 Query: 123 VLDM 126 Sbjct: 117 TGYP 120 >gi|317152080|ref|YP_004120128.1| flagellar hook-basal body protein [Desulfovibrio aespoeensis Aspo-2] gi|316942331|gb|ADU61382.1| flagellar hook-basal body protein [Desulfovibrio aespoeensis Aspo-2] Length = 535 Score = 79.5 bits (194), Expect = 4e-13, Method: Composition-based stats. Identities = 29/170 (17%), Positives = 56/170 (32%), Gaps = 17/170 (10%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID--------- 53 +S +G +A +R+ VA+N++N T+GF+ F +++ + Sbjct: 4 SSLYVGATGVVAHGERMQVVANNLANVSTIGFKKADALFGDLMSSQLGYGGGQFESGSSY 63 Query: 54 --QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR------GIILTRDGR 105 Q V+ G +T T D A+ G+ +F + TR G Sbjct: 64 ASQMGQGVSMSAIRTVFAEGGLENTTTTTDLAITGNGFFGVRDTTAGGTMGASHYTRAGS 123 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI 155 F+ +D LV + ++ G+ + Sbjct: 124 FRFNNDAYLVDPHDFRLQGYAVDRETGVVATQVSDVQLPYEDVVIDGQPV 173 Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 14/89 (15%), Positives = 26/89 (29%), Gaps = 5/89 (5%) Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEM 210 + Y G R + D + + LE SN + E Sbjct: 444 YQVANYRFASEWGLRRDGGNNFVATDASGAAMDGKALVGGRGSFVQNTLEMSNVDMAEEF 503 Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIR 239 MI + + + T +I ++ + I Sbjct: 504 ASMIITQRGYQANTKVITTSDSLLNTLIS 532 >gi|289804814|ref|ZP_06535443.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 65 Score = 79.5 bits (194), Expect = 4e-13, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 24/56 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56 M +S I A + + +A+N++N T GF+ + F +++ + Sbjct: 1 MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQS 56 >gi|309779447|ref|ZP_07674208.1| flagellar hook protein FlgE [Ralstonia sp. 5_7_47FAA] gi|308921688|gb|EFP67324.1| flagellar hook protein FlgE [Ralstonia sp. 5_7_47FAA] Length = 404 Score = 79.5 bits (194), Expect = 4e-13, Method: Composition-based stats. Identities = 30/135 (22%), Positives = 60/135 (44%), Gaps = 4/135 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA--IKNDIDQKISFVAS 61 F GL+ A + L + N++N +TVG++ +F +V + +Q V+ Sbjct: 2 GFQQGLSGLDAASKNLDVIGSNVANANTVGYKKSTAEFGDVYARSLVGASDNQIGQGVSV 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESP--RGIILTRDGRFKVTDDGSLVSASG 119 K + G+ TG LD A+ G ++ + + TR+G+F+ +G ++SA+G Sbjct: 62 TKVSQAFTQGNVTITGNPLDIAINGSGFYRMVDQGSGQVSYTRNGQFQTDKNGYVISATG 121 Query: 120 KYPVLDMASVPIQIP 134 + ++ Sbjct: 122 QNLTGYGVDSTGKVN 136 Score = 71.8 bits (174), Expect = 7e-11, Method: Composition-based stats. Identities = 18/149 (12%), Positives = 43/149 (28%), Gaps = 10/149 (6%) Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQK-----GKVI 155 T G D + + G + + ++VG G I+ + V+ Sbjct: 254 TPTGMSISNIDFTGTTQYGGGYNDTTVTQDGYATGRLASYSVGTDGTITGRYSNGRTSVL 313 Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEM 210 + + + +G + S ++ +E SN + E+ Sbjct: 314 GQIAMANFKAPEGLQNIGGNQWVETSNSGAPGLGTPGMGSFGLLQSSAVEQSNVDLSAEL 373 Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIR 239 MI + + + I + + + Sbjct: 374 VNMIVAQRSYQANAQTIKTEDTILQTLVS 402 >gi|319406994|emb|CBI80631.1| Flagellar hook protein FlgE [Bartonella sp. 1-1C] Length = 402 Score = 79.5 bits (194), Expect = 4e-13, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 65/182 (35%), Gaps = 12/182 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M G++ A RLS VADN++N T+G++ V+FS V V Sbjct: 6 MMR---TGVSGMNAQGTRLSGVADNVANAGTIGYKRTDVQFSNYVTP-SGKYAYVPGGVK 61 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 S + G +TG D + G+ +F + LTR G F DG L + +G Sbjct: 62 SHIGHDVSIGGPARATGRSGDTMIHGNGFFRVADENGKEFLTRAGSFIRDKDGYLRNTAG 121 Query: 120 KYPVLDM-------ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172 Y + + + + V G + + + + ++ Sbjct: 122 YYLLNEDGEKIQIKGGPTDLFGPEATTKIDFKANFNPSAKVVEPKDGTINPENPETYSQK 181 Query: 173 EN 174 ++ Sbjct: 182 KS 183 Score = 75.7 bits (184), Expect = 6e-12, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 51/167 (30%), Gaps = 11/167 (6%) Query: 84 LEGDAWFALESPRGIILTRDGRFKVTDDG--SLVSASGK----YPVLDMASVPIQIPQKD 137 +E F L P T + G SLV+ G D Sbjct: 233 IEPTKEFKLTLPDSEGNTFEVNVNFGGVGADSLVTQKGNLFAFEGEADGMESGAFDGFTF 292 Query: 138 EIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV----- 192 E +QK + I +G+ +V + + N P Sbjct: 293 GKNGEIEVMYSNQKTRTIGYIGVTTVASTDSLTFLGGTVFETNSQTGPQMMGRPGDGVFG 352 Query: 193 TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 T+ G+LEDSN + E+ MI + + + + + + M + Sbjct: 353 TLSSGYLEDSNVDMGDELTDMIEAQRNYTANSKVFQTGSELMDVIVN 399 >gi|310767290|gb|ADP12240.1| flagellar hook protein FlgE [Erwinia sp. Ejp617] Length = 402 Score = 79.5 bits (194), Expect = 4e-13, Method: Composition-based stats. Identities = 29/237 (12%), Positives = 67/237 (28%), Gaps = 24/237 (10%) Query: 25 NMSNTD-----TVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTE 79 N +N + T ++ F + + ++ A + S + G + Sbjct: 166 NYANLNINDSTTYNAKSSMTAFDSL--GNAHTVNLYFVKTADNNWTVHPVDASTGTAGAD 223 Query: 80 LDFALEGDAWFALESPRGIILTRD--------GRFKVTDDGSLVSASG----KYPVLDMA 127 + + + + T V GS +G P D Sbjct: 224 TNLVFNSNGQLVTPNNGQVSFTMGQLNGSNGPTTLNVNLTGSQQQNNGKSTFGNPTQDGY 283 Query: 128 SVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPL- 186 + +++ +V+ + L + +G ++ S + Sbjct: 284 KPGELTSYQINDDGTLVGTYSNEQTQVLGQIVLSNFANPEGLKSEGDNVWSASAASGQAL 343 Query: 187 ----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + T+ G LE SN + E+ MI + + S I ++ + + Sbjct: 344 SGIAGTGNLGTLTAGALESSNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400 Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 71/182 (39%), Gaps = 6/182 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 F+ ++ A L + +N+SN+ T GF++ V F+++ K + K++ V Sbjct: 2 GFSQAVSGLNAASSNLDVIGNNISNSATAGFKSSTVAFADMFAGSKVGLGTKVASV---- 57 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +T LD A+ +F + ++ G+ +R+G+F + + ++V+ G + Sbjct: 58 -VQDFNDGTTTNTSRGLDVAISSAGFFRMADANGGVFYSRNGQFTLDQNRNIVNMQGLHL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q + K T + + S V+ + + Sbjct: 117 TGYPATGTPPTVQTGANPVALSVPATAMAAKATTTAAMTANLNSTDAVKNYANLNINDST 176 Query: 183 PT 184 Sbjct: 177 TY 178 >gi|302037613|ref|YP_003797935.1| flagellar hook protein FlgE [Candidatus Nitrospira defluvii] gi|300605677|emb|CBK42010.1| Flagellar hook protein FlgE [Candidatus Nitrospira defluvii] Length = 407 Score = 79.5 bits (194), Expect = 4e-13, Method: Composition-based stats. Identities = 30/136 (22%), Positives = 57/136 (41%), Gaps = 4/136 (2%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV---GAIKNDIDQKISF 58 TS + + + + +N++N T GF++ + FS+++ + DQ Sbjct: 4 LTSMFTAVTGLSSYGNAMGVIGNNIANVGTAGFKSSRATFSDLISSSLGGGSGSDQIGLG 63 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSA 117 V + GS +TG D A++G+ ++ + + +R G+FKV G +V + Sbjct: 64 VFLNDVQTNFSQGSMTTTGNTFDLAIDGNGFYLVRNTSGANFYSRAGQFKVDSLGQVVDS 123 Query: 118 SGKYPVLDMASVPIQI 133 SG A I Sbjct: 124 SGALLQGYQADTNGNI 139 Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 17/123 (13%), Positives = 37/123 (30%), Gaps = 5/123 (4%) Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 D S + + + + +A + L G V ++ + Sbjct: 282 QTQDGYSSGTLDRISVDKEGRVMAQFTNGETRALAQVVLSRFTNPDGLVNVGDNHFLETV 341 Query: 182 PPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + V G +E SN + E MI + F + + I +++ + E Sbjct: 342 ESGAALAGAPTINGLGRVLSGTVEQSNVDLGKEFVDMIITQRAFQANSRAITTSDEMLQE 401 Query: 237 AIR 239 + Sbjct: 402 LVN 404 >gi|330889080|gb|EGH21741.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv. mori str. 301020] Length = 100 Score = 79.5 bits (194), Expect = 4e-13, Method: Composition-based stats. Identities = 11/100 (11%), Positives = 32/100 (32%), Gaps = 5/100 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLED 201 ++I + G + + + + LE+ Sbjct: 1 PPPATPQIIGNIQTADFINPAGLQAIGGNLYLETGSSGAPQIGTPGLNGLGPTLQNTLEN 60 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 SN +++ E+ MI + + + +I ++ + +N+ Sbjct: 61 SNVSTVEELVNMITTQRAYEMNSKVISTADQMLQNLTQNL 100 >gi|259908812|ref|YP_002649168.1| flagellar hook protein FlgE [Erwinia pyrifoliae Ep1/96] gi|224964434|emb|CAX55943.1| Flagellar biosynthesis, hook protein [Erwinia pyrifoliae Ep1/96] gi|283478794|emb|CAY74710.1| flgE [Erwinia pyrifoliae DSM 12163] Length = 402 Score = 79.5 bits (194), Expect = 4e-13, Method: Composition-based stats. Identities = 29/237 (12%), Positives = 67/237 (28%), Gaps = 24/237 (10%) Query: 25 NMSNTD-----TVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTE 79 N +N + T ++ F + + ++ A + S + G + Sbjct: 166 NYANLNINDSTTYNAKSSMTAFDSL--GNAHTVNLYFVKTADNNWTVHPVDASTGTAGAD 223 Query: 80 LDFALEGDAWFALESPRGIILTRD--------GRFKVTDDGSLVSASG----KYPVLDMA 127 + + + + T V GS +G P D Sbjct: 224 TNLVFNANGQLVTPNNGQVSFTMGQLNGSNGPTTLNVNLTGSQQQNNGKSTFGNPTQDGY 283 Query: 128 SVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPL- 186 + +++ +V+ + L + +G ++ S + Sbjct: 284 KPGELTSYQINDDGTLVGTYSNEQTQVLGQIVLSNFANPEGLKSEGDNVWSASAASGQAL 343 Query: 187 ----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + T+ G LE SN + E+ MI + + S I ++ + + Sbjct: 344 SGIAGTGNLGTLTAGALESSNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400 Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 71/182 (39%), Gaps = 6/182 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 F+ ++ A L + +N+SN+ T GF++ V F+++ K + K++ V Sbjct: 2 GFSQAVSGLNAASSNLDVIGNNISNSATAGFKSSTVAFADMFAGSKVGLGTKVASV---- 57 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +T LD A+ +F + ++ G+ +R+G+F + + ++V+ G + Sbjct: 58 -VQDFNDGTTTNTSRGLDVAISSAGFFRMADANGGVFYSRNGQFTLDQNRNIVNMQGLHL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q + K T + + S V+ + + Sbjct: 117 TGYPATGTPPTVQTGANPVALSVPATAMAAKATTTAAMTANLNSTDAVKNYANLNINDST 176 Query: 183 PT 184 Sbjct: 177 TY 178 >gi|148980302|ref|ZP_01815989.1| flagellar hook protein E [Vibrionales bacterium SWAT-3] gi|145961321|gb|EDK26631.1| flagellar hook protein E [Vibrionales bacterium SWAT-3] Length = 408 Score = 79.5 bits (194), Expect = 4e-13, Method: Composition-based stats. Identities = 40/202 (19%), Positives = 75/202 (37%), Gaps = 11/202 (5%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SF+I L+ A L+T+++N++N T GF+ + +F+ V + + + + + Sbjct: 2 SFSIALSGLNASNSELNTISNNIANVSTTGFKESRTEFASVYSGSEAGGVEVVGVSQNFE 61 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSA----- 117 + G+ TG LD AL G+ +F LE + + TR G F + DG + + Sbjct: 62 -----KSGTVTGTGRSLDMALSGNGFFVLEDSKGQTLYTRSGIFNMNADGVITANSGAAL 116 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177 G + + + + E V V S ++ Sbjct: 117 QGYSVDGNNNLLLGSVGTVQISTASLQARETDSIEFVANLDAREQVPASAFDYSDSSTYN 176 Query: 178 SPNIPPTPLEDLSGVTVKRGFL 199 P + TV + F+ Sbjct: 177 HSYTTPVYDSLGNPHTVSQYFV 198 Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 18/145 (12%), Positives = 44/145 (30%), Gaps = 10/145 (6%) Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-----EISQKGKVIATMG 159 V D S V+ G V+ S + G + + ++ + Sbjct: 262 SVTVNIDLSAVTQFGSDFVVSKNSPNGSTSGDYASVRMENDGRIFATYTNGQSQLQGQVV 321 Query: 160 LYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMI 214 L Q ++ ++ + + + + G LE SN + E+ ++ Sbjct: 322 LADFASPQNMIKTSDTAWLQSFSSGTPVLGTAGSGVFGDLTSGALEGSNVDLTSELVALM 381 Query: 215 HLTQKFNSITTLIDENEKSMLEAIR 239 + + + T I +++ Sbjct: 382 TAQRNYQANTKSISTSDQLTQALFN 406 >gi|319403978|emb|CBI77566.1| Flagellar hook protein FlgE [Bartonella rochalimae ATCC BAA-1498] Length = 402 Score = 79.1 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 35/127 (27%), Positives = 53/127 (41%), Gaps = 5/127 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M G++ A RLS VADN++N T+G++ V+FS V V Sbjct: 6 MMR---TGVSGMNAQGTRLSGVADNVANAGTIGYKRTNVQFSNYVTP-SGQYAYVSGGVK 61 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 S + G +TG D + G+ +F + LTR G F DG L + +G Sbjct: 62 SHIGHDISIGGPARATGRSGDTMIHGNGFFRVADENGKEFLTRAGSFVRDKDGYLRNTAG 121 Query: 120 KYPVLDM 126 Y + + Sbjct: 122 YYLLNED 128 Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 29/167 (17%), Positives = 49/167 (29%), Gaps = 11/167 (6%) Query: 84 LEGDAWFALESPRGIILTRDGRFKVTDDG--SLVSASGK----YPVLDMASVPIQIPQKD 137 + F L P T + G SLV+ G D Sbjct: 233 IAPTKEFKLTLPDSEGNTFEVNVNFGGVGADSLVTQKGNLFAFEGEADGMESGAFDGFTF 292 Query: 138 EIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV----- 192 E +QK + I +G+ +V + N P Sbjct: 293 GKNGEIEVMYSNQKTRTIGYIGVTTVASPDSLTFLGGTVFETNSQTGPQMMGRPGDGVFG 352 Query: 193 TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 T+ G+LEDSN + E+ MI + + + + + + M + Sbjct: 353 TLSSGYLEDSNVDMGDELTDMIEAQRNYTANSKVFQTGSELMDVIVN 399 >gi|75675292|ref|YP_317713.1| flagellar basal body rod protein, FlaE [Nitrobacter winogradskyi Nb-255] gi|74420162|gb|ABA04361.1| Flagellar basal body rod protein, FlaE [Nitrobacter winogradskyi Nb-255] Length = 613 Score = 79.1 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 54/139 (38%), Gaps = 11/139 (7%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + N + A L ++ N++N T G++ I FS+++ Q V + Sbjct: 6 ALNTSVGGLQAQSFALQNISGNIANAQTTGYKGITTAFSDLIPDSTAPNRQAAGGVTAYA 65 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRG-----------IILTRDGRFKVTDDG 112 G+ ++ A+ GD +F +++P G TR G F+V G Sbjct: 66 TATISSQGTVSASTVGTYMAITGDGFFNVQAPTGRMDNQPQFSGVTYYTRRGDFQVDAGG 125 Query: 113 SLVSASGKYPVLDMASVPI 131 LV+++G Y + Sbjct: 126 HLVNSAGYYLMGVPVDPKT 144 Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 13/127 (10%), Positives = 39/127 (30%) Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 +A+ + + + + + +A + L + + + Sbjct: 487 NATINAINQNGYAAGQLQSVAVNNDGIVVGTFSNGQNLSLAQVSLSHFNGTNYLKALDGG 546 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 + + + LE SNA+ E ++I Q +++ T +I + Sbjct: 547 AYAVTNESGSAIAGASGRISGSSLEGSNADIADEFTKLIVTQQAYSANTKVITTANSMVQ 606 Query: 236 EAIRNIA 242 + + + Sbjct: 607 DLLNVLR 613 >gi|254294563|ref|YP_003060586.1| hypothetical protein Hbal_2209 [Hirschia baltica ATCC 49814] gi|254043094|gb|ACT59889.1| protein of unknown function DUF1078 domain protein [Hirschia baltica ATCC 49814] Length = 458 Score = 79.1 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 34/198 (17%), Positives = 66/198 (33%), Gaps = 7/198 (3%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 ++ G A A ++ ++N++N +TVGF+ I+ F+ ++ V + Sbjct: 5 SALLAGTAGLRANASAMAATSENIANVNTVGFKRIRNDFTAMLNNQNYQSSYSAGAVRAT 64 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-------LTRDGRFKVTDDGSLV 115 L +E G+ S+ A+ G+ +F + G TR G+F + G L Sbjct: 65 ATTLMREQGTLQSSSVSTHMAISGEGYFVTRARGGDATSFDEYSYTRAGQFAPDEGGYLK 124 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 + +G+Y + +S G V S+ + + N Sbjct: 125 NTAGQYLYGWPIVNDQVVNASPTDLTALSAVRVSGYGGVAEASANLSITANLNADQEVNP 184 Query: 176 GISPNIPPTPLEDLSGVT 193 T Sbjct: 185 ATYTAGDMAAGNITPDFT 202 Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats. Identities = 11/98 (11%), Positives = 32/98 (32%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISP-----NIPPTPLEDLSGVTVKRGFLED 201 + + I + + + G + + ++ + V LE Sbjct: 358 YTNGFSRKIFQVPVATFGNEGGLIAQAGGSYRSGPETGDMNLRAPKSGEAGEVISSALES 417 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S + E +I + +++ + +I ++ + E I Sbjct: 418 STVDLAEEFSNLIVTQRAYSAASKIITTADEMLNELIS 455 >gi|85715029|ref|ZP_01046014.1| Flagellar basal body rod protein, FlaE [Nitrobacter sp. Nb-311A] gi|85698226|gb|EAQ36098.1| Flagellar basal body rod protein, FlaE [Nitrobacter sp. Nb-311A] Length = 640 Score = 79.1 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 54/139 (38%), Gaps = 11/139 (7%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + N + A L ++ N++N+ T G++ I F +++ Q V + Sbjct: 33 ALNTSVGGLQAQSFALQNISGNIANSQTTGYKGITTAFVDLIPDSTTPNRQVAGGVTAYA 92 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRG-----------IILTRDGRFKVTDDG 112 G+ ++ A+ GD +F +++P G TR G F+V G Sbjct: 93 TPTISSQGTVSASTVGTYMAINGDGFFNVQTPTGRVDNQPQFSGVTYYTRRGDFQVDAHG 152 Query: 113 SLVSASGKYPVLDMASVPI 131 LV+++G Y + Sbjct: 153 HLVNSAGYYLMGVAVDPKT 171 Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 13/127 (10%), Positives = 39/127 (30%) Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 +A+ + + + + + +A + L + + + Sbjct: 514 NATINAINQNGYAAGQLQSVAINNDGIVVGTFSNGQNLSLAQVSLSHFNGTNYLKALDGG 573 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 + P + + LE SN + E ++I Q +++ T +I + Sbjct: 574 AYAVTDESGPAIAGAAGHISGSSLEGSNTDIADEFTKLIVTQQAYSANTKVITTANSMVQ 633 Query: 236 EAIRNIA 242 + + + Sbjct: 634 DLLNVLR 640 >gi|253990127|ref|YP_003041483.1| flagellar hook protein FlgE [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253781577|emb|CAQ84740.1| flagellar hook protein flge [Photorhabdus asymbiotica] Length = 404 Score = 79.1 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 32/191 (16%), Positives = 72/191 (37%), Gaps = 6/191 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N T GF++ F+++ Q V Sbjct: 2 AFSQAVSGLNAAAANLDVIGNNIANAATYGFKSSSAAFADIFA-----GSQVGLGVKMSG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASGKYP 122 + + G+ +T LD A+ +F ++ S I +R+G FK+ ++ ++++ G Sbjct: 57 INQNFKDGTPTTTNRTLDMAITQGGFFRMQSSDGTIRYSRNGEFKLDENRNIINMQGMKL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A + + E ISQ ++ + + ++ +G Sbjct: 117 TGYPAVSVNGGAPEIQKGANPEPITISQDMLSAKATTKVTMTANLNSMHKKTTGAFSPEE 176 Query: 183 PTPLEDLSGVT 193 + VT Sbjct: 177 ADSYNYTTSVT 187 Score = 72.2 bits (175), Expect = 6e-11, Method: Composition-based stats. Identities = 15/123 (12%), Positives = 36/123 (29%), Gaps = 5/123 (4%) Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 P D + + E + + +V+ + L + +G + ++ Sbjct: 280 PKQDGYAAGKFNGYRIEKDGRVIGTYSNLQSQVLGQIVLTNFANPEGLAAQGDNVWVETG 339 Query: 182 PPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + LE SN + E+ MI + + S I ++ + Sbjct: 340 ASGSSIIGIAGSGGFGELLSSTLEASNVDMSKELVNMIVAQRNYQSNAQTIKTQDQILQT 399 Query: 237 AIR 239 + Sbjct: 400 LVS 402 >gi|313639076|gb|EFS04057.1| flagellar basal body rod protein FlgG [Listeria seeligeri FSL S4-171] Length = 239 Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats. Identities = 40/231 (17%), Positives = 80/231 (34%), Gaps = 18/231 (7%) Query: 23 ADNMSNTDTVGFRTIKVKFSEVVGAIKND---------IDQKISFVASGKEYLSKEVGSF 73 ++N++N T GF+ ++ SEV+ K + + V +++ GS Sbjct: 2 SNNVANAQTPGFKFDQLT-SEVISKNKVNYQNNLVAKKVGTIDYGVRPAATHINLTAGSS 60 Query: 74 ISTGTELDFALE------GDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMA 127 T + DF ++ G +F I L+R G+F G L +A G + Sbjct: 61 YITNRDRDFFMQDANPEQGSNFFLTAKNGEISLSRGGQFHSDQFGFLRTADGANLLSATG 120 Query: 128 SVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ--GFVRRENSGISPNIPPTP 185 + ++ + +G V Q + + N T Sbjct: 121 EAVQVGVKTSIRAEANGDLYNAETNAYLGRLGTRFVSADQVDNLAKDGEGRLHVNGTNTM 180 Query: 186 LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 ++ G LE SN + EM Q++ + + +++ +K + Sbjct: 181 NLPAGQGIIQNGVLETSNVDLGVEMVQLMDNQRMVQASKNIVNMFDKVYDK 231 >gi|320179222|gb|EFW54180.1| Flagellar basal-body rod protein FlgG [Shigella boydii ATCC 9905] Length = 54 Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 23/54 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54 M +S I A + + +A+N++N T GF+ + F +++ Sbjct: 1 MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGA 54 >gi|325109020|ref|YP_004270088.1| fagellar hook-basal body protein [Planctomyces brasiliensis DSM 5305] gi|324969288|gb|ADY60066.1| fagellar hook-basal body protein [Planctomyces brasiliensis DSM 5305] Length = 572 Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats. Identities = 36/219 (16%), Positives = 71/219 (32%), Gaps = 19/219 (8%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------KN 50 ++ L EQ + + +N++N T GF+ V F + Sbjct: 5 SALTTSLNGLALNEQTIDVLGNNIANAGTNGFKASSVLFETQLARTLSVGSRPTTENGGT 64 Query: 51 DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTD 110 + Q S GS S+ + D A++GD +F + G + TR G F ++ Sbjct: 65 NPQQIGLGATSAAILTDFSQGSVTSSTSPSDLAIQGDGFFIVNGSNGNLYTRAGNFNLSS 124 Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF- 169 + SLV+ G + G++ + ++ + Sbjct: 125 EDSLVTPEGLRVQGYGVDEDFNLVTTQLADINIPLGDLVVAQQTRNVHIGGAMLSTGDLA 184 Query: 170 -----VRRENSGISPNIPPTPLEDLSGVTVKRG-FLEDS 202 +R +S + + S T+ ++E S Sbjct: 185 TQSSILRSVDSLTAAASSTFAADPASAATLLNSLYVEGS 223 Score = 59.5 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 24/208 (11%), Positives = 61/208 (29%), Gaps = 12/208 (5%) Query: 36 TIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP 95 F ++ ++ + I + + + +D + Sbjct: 368 ASSTTFRYILESVDDSDSDTIVGTGTFTFDGEGVITNGAVQQFSID---RNNTAAVSPMQ 424 Query: 96 RGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI 155 I ++ GS ++ + I + I + + G I G+V+ Sbjct: 425 ISIDFSKLTGISTASAGSAITLQHQDGSNPGTLSRFVIDESGVINGIFDNGIIRTLGQVV 484 Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLEDSNANSMYEM 210 L QG + + + + T++ G +E SN + + Sbjct: 485 ----LARFSNPQGLLEAGGTNFQEGVSSGTPFLVTPGNFGAGTIRAGAIELSNTDIGRNL 540 Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAI 238 +I + + +ID ++ + E + Sbjct: 541 VDLIVASTNYRGNARVIDSVQQLVDELL 568 >gi|225620340|ref|YP_002721597.1| flagellar hook protein FlgE [Brachyspira hyodysenteriae WA1] gi|225215159|gb|ACN83893.1| flagellar hook protein FlgE [Brachyspira hyodysenteriae WA1] Length = 423 Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats. Identities = 29/134 (21%), Positives = 53/134 (39%), Gaps = 12/134 (8%) Query: 19 LSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI------------DQKISFVASGKEYL 66 + V +N++N +T GF+ +V F +++ + Q + Sbjct: 1 MDVVGNNIANVNTYGFKRGRVTFKDMISQSLSGAAKPQEDRGGINPQQVGLGMMVATIDT 60 Query: 67 SKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDM 126 G+ TG D A++G+ +F + TR+G F + DG LV+ S Y V Sbjct: 61 IHTQGALQVTGVNTDLAIQGEGFFIEKRGNNSYYTRNGAFSLDKDGYLVNPSNGYKVQGW 120 Query: 127 ASVPIQIPQKDEIF 140 +V + E+ Sbjct: 121 NAVLNPETGEMELN 134 Score = 75.3 bits (183), Expect = 6e-12, Method: Composition-based stats. Identities = 17/122 (13%), Positives = 38/122 (31%), Gaps = 5/122 (4%) Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 D ++ + + + K + + L + + G + ++ + Sbjct: 298 IEQDGYTMGMLEGFSFDDSGQITGVFTNGNRKTLGQVALAKFNNAGGLEKAGDTLFVQSN 357 Query: 182 PPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 ++K G LE SN + + MI + F S I ++ + E Sbjct: 358 NSGAANIGTAAAEGRGSIKAGTLEMSNVDLSEQFTDMIVTQRGFQSNARTITTADQMLQE 417 Query: 237 AI 238 I Sbjct: 418 VI 419 >gi|78219159|gb|ABB38508.1| flagellar hook protein FlgE [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 527 Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats. Identities = 29/119 (24%), Positives = 48/119 (40%), Gaps = 5/119 (4%) Query: 19 LSTVADNMSNTDTVGFRTIKVKFSEVVGA---IKNDIDQKISFVASGKEYLSKEVGSFIS 75 ++ + +N++N +TVGF+ ++ F + + + Q V G Y GSF + Sbjct: 1 MNVLGNNIANVNTVGFKGARMDFEDFISQDVNTASGTRQVGRGVGIGTIYGDFSQGSFET 60 Query: 76 TGTELDFALEGDAWFALESPRGI--ILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQ 132 T D A+ G +FA+ TR G F+ +G LV G P Sbjct: 61 TTEATDLAIGGRGFFAVSPKGEETAYYTRAGNFRFDKEGYLVDPHGYVLQGWQIETPRP 119 Score = 78.4 bits (191), Expect = 8e-13, Method: Composition-based stats. Identities = 30/216 (13%), Positives = 55/216 (25%), Gaps = 8/216 (3%) Query: 30 DTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAW 89 T G+ FS + + + + A T + + Sbjct: 311 STNGYPMFVANFSGI--SNASYVTPNPDPAAQPYIMELNLGLKNSDPSTWASAGVSNASL 368 Query: 90 FALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEIS 149 L + + S +S + + +G S Sbjct: 369 VGTNVANLPSLGNQAERQSSATTSFSGSSSTPTRYQDGYTFGFLQNVTVTRDGILQGRYS 428 Query: 150 QKGKV-IATMGLYSVDMSQGFVRRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSN 203 + + + LY R + S + P P TV LE SN Sbjct: 429 NGAVLDLYQITLYDFQSKDNLRREGGNLFSESNASGLAAPGPANANGYGTVNSNSLEQSN 488 Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + E MI + F S + +I + + I+ Sbjct: 489 VDLAKEFVNMITTQRGFQSNSKVITTTDTMLEVVIQ 524 >gi|17548566|ref|NP_521906.1| flagellar hook protein FlgE [Ralstonia solanacearum GMI1000] gi|17430814|emb|CAD17496.1| probable flagellar hook protein flge [Ralstonia solanacearum GMI1000] Length = 401 Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats. Identities = 32/135 (23%), Positives = 58/135 (42%), Gaps = 4/135 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVAS 61 F GL+ A + L + N++N +TVG++ +F +V +Q V Sbjct: 2 GFQQGLSGLDAASKNLDVIGSNVANANTVGYKKSTAEFGDVYARSLVGASDNQIGQGVDV 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPR--GIILTRDGRFKVTDDGSLVSASG 119 K S G+ TG LD A+ G ++ + + TR+G+F+ +G ++SA+G Sbjct: 62 TKVSQSFTQGNVTVTGNPLDIAINGTGFYRMVDASSGQVSYTRNGQFQTDKNGYIISATG 121 Query: 120 KYPVLDMASVPIQIP 134 + +I Sbjct: 122 QNLTGYGVDATGKIN 136 Score = 71.4 bits (173), Expect = 9e-11, Method: Composition-based stats. Identities = 21/224 (9%), Positives = 57/224 (25%), Gaps = 25/224 (11%) Query: 41 FSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL 100 FS A N + + +G ++ + G ++ ++G + Sbjct: 176 FSATNSATFNHSVSEQVYDGTGTSHMLTNYYVRTAAGWDVYSQVDGANPTGGNPVTSLTF 235 Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQK--------- 151 G + V+ +G + Q V + G + + Sbjct: 236 NSSGVLTSSPSKVAVAFAGMSIANMDFTGTTQYGGGFNDTTVSQDGYATGRLASYSVGTD 295 Query: 152 -----------GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VK 195 + + + + G + + + ++ Sbjct: 296 GTITGRYSNGRTSTLGQIAMTNFKAPDGLQNIGGNQWVETAESGAPQMGTPGMGSFGLLQ 355 Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +E SN + E+ MI + + + I + + + Sbjct: 356 SSAVEQSNVDLSAELVNMIVAQRSYQANAQTIKTEDTILQTLVS 399 >gi|163845457|ref|YP_001623112.1| flagellar hook protein FlgE [Brucella suis ATCC 23445] gi|163676180|gb|ABY40290.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] Length = 396 Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats. Identities = 37/123 (30%), Positives = 59/123 (47%), Gaps = 5/123 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M G++ A RLSTVADN++N VG++ + +FS +V S V Sbjct: 6 MMR---TGVSGMNAQANRLSTVADNIANASMVGYKRAETQFSSLVLPSTAGQYNSGS-VL 61 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASG 119 + Y + G ST + D A++ + +F ++ P G TR G F +G LV+++G Sbjct: 62 TDVRYGISDQGGIRSTSSTTDLAIDDNGYFVVQGPGGSTYLTRAGSFVPDKNGDLVNSAG 121 Query: 120 KYP 122 Y Sbjct: 122 YYL 124 Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats. Identities = 10/54 (18%), Positives = 22/54 (40%) Query: 186 LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + + G LE+SNA+ E+ MI + + + + + + M + Sbjct: 340 PQGDGMGKIMSGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGSELMDVLVN 393 >gi|83859391|ref|ZP_00952912.1| flagellar hook protein [Oceanicaulis alexandrii HTCC2633] gi|83852838|gb|EAP90691.1| flagellar hook protein [Oceanicaulis alexandrii HTCC2633] Length = 465 Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats. Identities = 34/201 (16%), Positives = 72/201 (35%), Gaps = 8/201 (3%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG-AIKNDIDQKISFVA 60 ++ G + +A L+ ++DN++N +TVG++ + F+ + S V+ Sbjct: 4 NSAMAAGASGLIANSSALAAISDNIANVNTVGYKRVDTIFTPNYKIGGGGETRYASSGVS 63 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-------IILTRDGRFKVTDDGS 113 S G + D A++GD +F + ++ TR G F+ G Sbjct: 64 SNSRLDVNSSGLLTPGVSATDMAIDGDGFFVVRPSPTAGGSSDAVLFTRSGGFQTDSSGY 123 Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRE 173 L + +G Y + Q + E +S G ++ + Sbjct: 124 LRNDAGMYLYAWPVQADGTVNQNPSNVDTLEAVNLSNIGGTANATSSVRINANLQASTTP 183 Query: 174 NSGISPNIPPTPLEDLSGVTV 194 ++ + P +++ TV Sbjct: 184 SAAAATYDPTASGTNMASGTV 204 Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats. Identities = 12/90 (13%), Positives = 33/90 (36%), Gaps = 5/90 (5%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLEDSNANSMYE 209 + + + +V G + + T+ +E+SN + E Sbjct: 373 VYQLPVATVFNPNGLASVGGASFQITEDSGAFTLNAPGSGASGTIAAKTVENSNVDIATE 432 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +I + +++ + +I ++ + EAI+ Sbjct: 433 FSNLIITQRAYSASSRIITTADEMLAEAIQ 462 >gi|242310749|ref|ZP_04809904.1| flagellar hook protein flge [Helicobacter pullorum MIT 98-5489] gi|239523147|gb|EEQ63013.1| flagellar hook protein flge [Helicobacter pullorum MIT 98-5489] Length = 764 Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats. Identities = 30/149 (20%), Positives = 57/149 (38%), Gaps = 21/149 (14%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56 M S G++ + + ++N++N +T GFR +F + N ++ Sbjct: 1 MVGSLYSGISGIKTHQVGIDVTSNNIANINTTGFRANTPEFKSLFSTNLNYVNSNSPVAN 60 Query: 57 ---SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL--------------ESPRGII 99 V G ++ G+++S + + A G WF + + + Sbjct: 61 DYNYGVTLGSNAINTNDGTYVSADGDFNVAYSGKGWFVVGLNKNGEFDINNPNYNVKQNY 120 Query: 100 LTRDGRFKVTDDGSLVSASGKYPVLDMAS 128 TRDG F + +G LV++SG Y Sbjct: 121 FTRDGSFSLDGEGYLVNSSGYYMYGINLG 149 Score = 64.1 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 32/105 (30%), Gaps = 18/105 (17%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL------------------SGVTV 194 + I +G+ + QG + + N E V Sbjct: 656 EPIGRIGIAAFVNDQGLSKVGGNLFEMNAMTINGETSVVSGPPLLAWEETGTASLKYGQV 715 Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 LE SN ++ + +I + + I ++ M EAI+ Sbjct: 716 LDHMLETSNVDTGTALTDLIVYQRGYQMSAKSITTADQLMQEAIQ 760 >gi|306518947|ref|ZP_07405294.1| flagellar basal body rod protein FlgG [Clostridium difficile QCD-32g58] Length = 182 Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 59/129 (45%), Gaps = 9/129 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV--------GAIKNDI 52 M T F A A + +L +++N++N+D+ G++ I +++S++V + Sbjct: 1 MYTMFYTSKTALSANQSKLDIISNNIANSDSTGYKKINMEYSDLVDEVLNRPSYPTNGND 60 Query: 53 DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDD 111 + + E G+ T ++ + A++G+ +F + G TR+G F + Sbjct: 61 ISTGTGAKATAPMRIYEQGALAPTDSKSNLAIDGEGFFRVIRKDGTYAYTRNGGFNIDGL 120 Query: 112 GSLVSASGK 120 G +V +G Sbjct: 121 GKIVDDNGN 129 >gi|182680457|ref|YP_001834603.1| flagellar hook protein FlgE [Beijerinckia indica subsp. indica ATCC 9039] gi|182636340|gb|ACB97114.1| flagellar basal body FlaE domain protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 415 Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats. Identities = 29/125 (23%), Positives = 55/125 (44%), Gaps = 2/125 (1%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 ++ ++ A +LS V+DN++N++T G++ +F +V + N V + Sbjct: 5 SALTASVSGMAAQSNKLSAVSDNIANSNTTGYKQADTEFETLVNGL-NKTSYDAGGVKTT 63 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASGKY 121 Y G ST + D ++G+ +F + G TR G F DG+L + +G Sbjct: 64 IRYNISSQGQLTSTSSATDLGIQGNGFFVVTDDSGTKYLTRAGSFTKNADGTLSNTAGYK 123 Query: 122 PVLDM 126 + Sbjct: 124 LMGYN 128 Score = 63.0 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 11/68 (16%), Positives = 27/68 (39%) Query: 172 RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 E +G S +I +++ LE SN + ++ MI + + + + + + Sbjct: 345 YEANGDSGSIIIGDAGTNGLGSIQSSQLESSNVDLAAQLTDMIVAQRGYEANSKVFETGS 404 Query: 232 KSMLEAIR 239 + E + Sbjct: 405 TLLTELVN 412 >gi|86747891|ref|YP_484387.1| flagellar hook protein FlgE [Rhodopseudomonas palustris HaA2] gi|86570919|gb|ABD05476.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2] Length = 421 Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 65/168 (38%), Gaps = 3/168 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + + ++A A L+ ++DN++N+ TVG++T F +V V + Sbjct: 6 ALSSAISALNAQSSALAMISDNIANSSTVGYKTSSASFESLVTNTSGASSYSSGGVTASA 65 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALE---SPRGIILTRDGRFKVTDDGSLVSASGK 120 G ST T + A++G+ +F + + + TR+G F + DG LV+ Sbjct: 66 TSNITTQGLLTSTTTATNIAIQGNGFFPVTTSLTGGSTLYTRNGAFTIDSDGYLVNNGAY 125 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 + I E V +++ T ++ ++ Sbjct: 126 LLGWRTDTDGNVIGTASEGNLVPIDTSVAKTSSGATTTTSFAANLPAD 173 Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 13/92 (14%), Positives = 27/92 (29%), Gaps = 5/92 (5%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLEDSNANSMYE 209 I + + + S + + T+ LE S ++ + Sbjct: 330 IYKIPVATFTASAELEAQSGGLYATTAASGSATLQESGANGAGTIYGSELESSTTDTNEQ 389 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 MI Q +++ + +I K I I Sbjct: 390 FSSMISAQQAYSAASQVITAVNKMFDTLIAAI 421 >gi|299068732|emb|CBJ39971.1| flagellar hook protein FlgE [Ralstonia solanacearum CMR15] Length = 401 Score = 78.8 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 4/135 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVAS 61 F GL+ A + L + N++N +TVG++ +F +V +Q V Sbjct: 2 GFQQGLSGLDAASKNLDVIGSNVANANTVGYKKSTAEFGDVYARSLVGASDNQIGQGVDV 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPR--GIILTRDGRFKVTDDGSLVSASG 119 K S G+ TG LD A+ G ++ + + TR+G+F+ +G ++SA+G Sbjct: 62 TKVSQSFTQGNVTVTGNPLDIAINGTGFYRMVDASSGQVSYTRNGQFQTDKNGYIISATG 121 Query: 120 KYPVLDMASVPIQIP 134 + A +I Sbjct: 122 QNLTGYAADATGKIN 136 Score = 71.4 bits (173), Expect = 9e-11, Method: Composition-based stats. Identities = 22/224 (9%), Positives = 59/224 (26%), Gaps = 25/224 (11%) Query: 41 FSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL 100 FS A N + + +G ++ TG ++ ++G A + Sbjct: 176 FSATNSATYNHSVSEQVYDGTGTSHMLTNYYVRTGTGWDVYSTVDGAAPTGGNPVTSLTF 235 Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQK--------- 151 G + V+ +G + Q ++ + G + + Sbjct: 236 NSSGALTSSPSKVAVAFTGMSIASMDFTGTTQYGGGFNDTSITQDGYATGRLASYSVGND 295 Query: 152 -----------GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VK 195 + + + + G + + + ++ Sbjct: 296 GTITGRYSNGRTSTLGQIAMTNFKAPDGLQNIGGNQWVETAESGSPQMGTPGMGSFGLLQ 355 Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +E SN + E+ MI + + + I + + + Sbjct: 356 SSAVEQSNVDLSAELVNMIVAQRSYQANAQTIKTEDTILQTLVS 399 >gi|270487672|ref|ZP_06204746.1| fagellar hook-basal body protein [Yersinia pestis KIM D27] gi|270336176|gb|EFA46953.1| fagellar hook-basal body protein [Yersinia pestis KIM D27] Length = 193 Score = 78.8 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 33/173 (19%), Positives = 54/173 (31%), Gaps = 8/173 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M ++ + A+N++N++T GFR + V Sbjct: 1 MDKLLYTAVSGANRSLSQQQIHANNLANSNTQGFRADLE--KATATQVMGGGYSSRVAVL 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTD------DGSL 114 S + S TG +LD AL+ A+ S TR+G+ V+ +G Sbjct: 59 SQNAGVDMTPASLQETGRDLDIALKNQGLIAVLSGGREAYTRNGQMDVSAEGALTINGLP 118 Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 V G VL S G QK + + + S+ Sbjct: 119 VLGDGGPIVLPPYSALSIADDGTIAIIPQRGGSKLQKRSSASNWWISPLTNSE 171 >gi|255591998|ref|XP_002535647.1| Flagellar basal-body rod protein flgG, putative [Ricinus communis] gi|223522413|gb|EEF26734.1| Flagellar basal-body rod protein flgG, putative [Ricinus communis] Length = 166 Score = 78.8 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 56/124 (45%), Gaps = 16/124 (12%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV---------------GAIKNDIDQKI 56 A + + T+A N++N +T G++ +V FS++V + + + Sbjct: 1 MQAQQLNVETIASNLANVNTAGYKRSRVSFSDLVALDPARRTAALAGSDAGLLAPVMRMG 60 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLV 115 + V + G T +D ++G+ +F +++P G TR G + V DG+L Sbjct: 61 AGVGVAGISKLFDAGDIKKTDLPMDIIVQGEGFFEVQTPDGTPAYTRGGTWTVNRDGNLA 120 Query: 116 SASG 119 +++G Sbjct: 121 TSAG 124 >gi|11386807|sp|P57422|FLGE_BUCAI RecName: Full=Flagellar hook protein flgE gi|25403598|pir||E84969 flagellar hook protein flgE [imported] - Buchnera sp. (strain APS) gi|10039011|dbj|BAB13045.1| flagellar hook protein flgE [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] Length = 405 Score = 78.8 bits (192), Expect = 6e-13, Method: Composition-based stats. Identities = 26/119 (21%), Positives = 54/119 (45%), Gaps = 1/119 (0%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66 I ++ LA + +++N++N T+G+++ K F ++ V Sbjct: 2 IAISGLLANNDYMEIISNNIANASTIGYKSRKPLFFDMFSHSFYSNTTNGYGVGISSIIQ 61 Query: 67 SKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYPVL 124 + G + TG +LD + D +F ++S + TRDG+F + D ++++ G Y Sbjct: 62 NFNNGMLVETGRDLDLGIIKDGFFRLVDSQGHVYYTRDGQFFLDKDQNIINIQGMYLTG 120 Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 30/99 (30%), Gaps = 6/99 (6%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVK-RG-----FLE 200 +QK + I + L + + S + ++ G LE Sbjct: 305 YCNQKQQTIGQILLSKFINPEKLQPESGNLWSATAESGEAKTAMKAGIQESGVLSNKTLE 364 Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ MI + + S +K + I Sbjct: 365 VSNVDLNKELINMIIAQRNYQSNAQSFKTEDKIINTLIN 403 >gi|83747654|ref|ZP_00944690.1| FlgE [Ralstonia solanacearum UW551] gi|207728346|ref|YP_002256740.1| flagellar hook protein flge [Ralstonia solanacearum MolK2] gi|207739737|ref|YP_002258130.1| flagellar hook protein flge [Ralstonia solanacearum IPO1609] gi|83725706|gb|EAP72848.1| FlgE [Ralstonia solanacearum UW551] gi|206591592|emb|CAQ57204.1| flagellar hook protein flge [Ralstonia solanacearum MolK2] gi|206593119|emb|CAQ60025.1| flagellar hook protein flge [Ralstonia solanacearum IPO1609] Length = 401 Score = 78.8 bits (192), Expect = 6e-13, Method: Composition-based stats. Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 4/135 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVAS 61 F GL+ A + L + N++N +TVG++ +F +V +Q V Sbjct: 2 GFQQGLSGLDAASKNLDVIGSNVANANTVGYKKSTAEFGDVYARSLVGASDNQIGQGVDV 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPR--GIILTRDGRFKVTDDGSLVSASG 119 K S G+ TG LD A+ G ++ + + TR+G+F+ +G ++SA+G Sbjct: 62 TKVSQSFTQGNVTVTGNPLDIAINGTGFYRMVDTSSGQVSYTRNGQFQTDKNGYIISATG 121 Query: 120 KYPVLDMASVPIQIP 134 + A +I Sbjct: 122 QNLTGYAADATGKIN 136 Score = 73.0 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 15/152 (9%), Positives = 44/152 (28%), Gaps = 12/152 (7%) Query: 98 IILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQK-----G 152 + T + G+ + G + + ++VG G I+ + Sbjct: 250 VAFTGMSIASMDFTGT--TQYGGGFNDTSVTQDGYATGRLASYSVGNDGTITGRYSNGRT 307 Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSM 207 + + + + G + + + ++ +E SN + Sbjct: 308 STLGQIAMTNFKAPDGLQNIGGNQWVETAESGSPQMGTPGMGSFGLLQSSAVEQSNVDLS 367 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E+ MI + + + I ++ + + Sbjct: 368 AELVNMIVAQRSYQANAQTIKTEDQLLQTLVS 399 >gi|300693338|ref|YP_003749311.1| flagellar hook protein flge [Ralstonia solanacearum PSI07] gi|299075375|emb|CBJ34670.1| flagellar hook protein FlgE [Ralstonia solanacearum PSI07] Length = 401 Score = 78.8 bits (192), Expect = 6e-13, Method: Composition-based stats. Identities = 32/135 (23%), Positives = 58/135 (42%), Gaps = 4/135 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVAS 61 F GL+ A + L + N++N +TVG++ +F +V +Q V Sbjct: 2 GFQQGLSGLDAASKNLDVIGSNVANANTVGYKKSTAEFGDVYARSLVGASDNQIGQGVDV 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPR--GIILTRDGRFKVTDDGSLVSASG 119 K S G+ TG LD A+ G ++ + + TR+G+F+ +G ++SA+G Sbjct: 62 TKVSQSFTQGNVTVTGNPLDIAINGTGFYRMVDASSGQVSYTRNGQFQTDKNGYIISATG 121 Query: 120 KYPVLDMASVPIQIP 134 + +I Sbjct: 122 QNLTGYGVDATGKIN 136 Score = 72.2 bits (175), Expect = 5e-11, Method: Composition-based stats. Identities = 22/224 (9%), Positives = 59/224 (26%), Gaps = 25/224 (11%) Query: 41 FSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL 100 FS A N + + +G ++ +TG ++ ++G + Sbjct: 176 FSATNSATFNHSVSEQVYDGTGTSHMLTNYYVRTATGWDVYSQVDGANPTGGNPVTSLTF 235 Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQK--------- 151 G + V+ +G + Q V + G + + Sbjct: 236 NSSGTLTSSPSKVAVAFAGMSIANMDFTGTTQYGGGFNDTTVSQDGYATGRLASYSVGTD 295 Query: 152 -----------GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VK 195 + + + + G + + + ++ Sbjct: 296 GTITGRYSNGRTSTLGQIAMTNFKAPDGLQNIGGNQWVETAESGSPQMGTPGMGSFGLLQ 355 Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +E SN + E+ MI + + + I ++ + + Sbjct: 356 SSAVEQSNVDLSAELVNMIVAQRSYQANAQTIKTEDQLLQTLVS 399 >gi|188579925|ref|YP_001923370.1| flagellar hook protein FlgE [Methylobacterium populi BJ001] gi|179343423|gb|ACB78835.1| flagellar basal body FlaE domain protein [Methylobacterium populi BJ001] Length = 402 Score = 78.8 bits (192), Expect = 6e-13, Method: Composition-based stats. Identities = 31/172 (18%), Positives = 64/172 (37%), Gaps = 1/172 (0%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 G++ A R+STVA+N+ N T G++ +FS ++ + + V + Sbjct: 7 LRTGVSGMNAQSNRISTVAENIQNASTTGYKRTSAEFSSLLLDSGDVGNYNSGAVETTLR 66 Query: 65 YLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYPV 123 E G ST ++ D A++G+ +F + +TR G F V + +G + + Sbjct: 67 RSVSEGGPIASTNSDKDLAIQGNGFFVVSDAAGAPFMTRAGNFVVDGKTGNLVNAGGFTL 126 Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 + + + +S G+ ++ + F Sbjct: 127 MGYSLANGTPNPVLNGVADLKPVNVSVMGQEARPSTSATISGNLSFETPVYD 178 Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 32/250 (12%), Positives = 66/250 (26%), Gaps = 16/250 (6%) Query: 6 NIGLAAQLALEQRLSTVADNMS--------NTDTVGF-RTIKVKFSEVVGAIKNDIDQKI 56 N+ + Q A +T++ N+S T T+G+ + +K + VG Q Sbjct: 150 NVSVMGQEARPSTSATISGNLSFETPVYDPATSTIGYSKKNSLKVYDNVGQPVTLDVQMT 209 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVS 116 A+ + A +G+ + + KV G Sbjct: 210 KTAANTWSVKFFNPADATTPVGTATVAFDGNGKVTSGGSTLVQVPNGREIKVDLGGLTQL 269 Query: 117 ASGKYPVLDMAS--VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174 + K + L V R Sbjct: 270 SGDHALSGTADGSSPTSVSGTAFGEDGTVYAVYSDGTRKAAFKVPLADVASPDNLSPRAG 329 Query: 175 SGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 + + + ++ +K G LE SN + E+ MI + + + + Sbjct: 330 NVFTTSAESGDIQIGFAGAGGRGILKAGALEQSNVDVSTELTTMIESQTVYTANSKVFMT 389 Query: 230 NEKSMLEAIR 239 + + + Sbjct: 390 GNELLETLMN 399 >gi|260768782|ref|ZP_05877716.1| flagellar hook protein FlgE [Vibrio furnissii CIP 102972] gi|260616812|gb|EEX41997.1| flagellar hook protein FlgE [Vibrio furnissii CIP 102972] Length = 397 Score = 78.8 bits (192), Expect = 6e-13, Method: Composition-based stats. Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 6/131 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SFNI L+ A Q L+T+++N++N T GF+ + +F V + Q G Sbjct: 2 SFNIALSGLNASNQELNTISNNIANVSTTGFKESRTEFGSVY-----NGQQAGGVQVMGI 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLVSASGKYP 122 + GS +TG LD AL G +F ++ G + TR G F + G+++S +G Sbjct: 57 SQNFEATGSMSATGRSLDMALTGSGFFVVQDKNGQLSYTRSGVFGLDSQGNVISNTGGSL 116 Query: 123 VLDMASVPIQI 133 + Sbjct: 117 QGYTVDGNNNL 127 Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 12/105 (11%), Positives = 35/105 (33%), Gaps = 5/105 (4%) Query: 142 VGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKR 196 + + + + + L + + Q ++ N+ + + Sbjct: 293 MVYATYSNGQSLLQGQLVLANFNAPQELMQTSNTAWTQTYGSGQPVYGIPGSGQFGELAS 352 Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 G LE SN + E+ ++ + + + T I ++ M+ + Sbjct: 353 GVLEGSNVDLTSELVHLMSAQRNYQANTKTITTADQLMMSLFNAV 397 >gi|41351258|emb|CAE47476.1| flagellar hook protein [Helicobacter hepaticus] Length = 693 Score = 78.8 bits (192), Expect = 6e-13, Method: Composition-based stats. Identities = 29/165 (17%), Positives = 57/165 (34%), Gaps = 15/165 (9%) Query: 15 LEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-------------KNDIDQKISFVAS 61 + L ++N++N +TVGF+ + F +++ I + V Sbjct: 1 HQIALDVESNNIANVNTVGFKYSRASFVDMLSQIKLIATSPYKNGLGGQNDFSVGLGVGI 60 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII--LTRDGRFKVTDDGSLVSASG 119 G+ +T + D A+EGD +F + RG TR+G F +G+LV+ G Sbjct: 61 DATTKVFSQGNTQNTDVKTDVAIEGDGFFIISPDRGTTHNYTRNGEFLFDANGNLVTTGG 120 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 + + + + + I + Sbjct: 121 YVVQGWVRPPLEAAESGTMSDFDFFRVDNTGPVRNIQIDPGMVMP 165 Score = 64.1 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 14/120 (11%), Positives = 38/120 (31%), Gaps = 5/120 (4%) Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + + + + + + + +A + L + + G + Sbjct: 574 SETYSINQNGYQAGDLMDIRFDSNGSLLGAFSNGRSIALAQVALANFANNAGLQAEGGNV 633 Query: 177 ISPNIPPTPLEDLSGVTVKRG-----FLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 S + T +RG LE SN + + Q+I + + F + + + ++ Sbjct: 634 YSQTGNSGEPMVGAANTGRRGGVSGSKLEMSNVDLSRSLTQLIVVQRGFQANSKAVTTSD 693 >gi|300696913|ref|YP_003747574.1| flagellar hook protein FlgE [Ralstonia solanacearum CFBP2957] gi|299073637|emb|CBJ53157.1| flagellar hook protein FlgE [Ralstonia solanacearum CFBP2957] Length = 401 Score = 78.8 bits (192), Expect = 6e-13, Method: Composition-based stats. Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 4/135 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVAS 61 F GL+ A + L + N++N +TVG++ +F +V +Q V Sbjct: 2 GFQQGLSGLDAASKNLDVIGSNVANANTVGYKKSTAEFGDVYARSLVGASDNQIGQGVDV 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPR--GIILTRDGRFKVTDDGSLVSASG 119 K S G+ TG LD A+ G ++ + + TR+G+F+ +G ++SA+G Sbjct: 62 TKVSQSFTQGNVTVTGNPLDIAINGTGFYRMVDASSGQVSYTRNGQFQTDKNGYIISATG 121 Query: 120 KYPVLDMASVPIQIP 134 + A +I Sbjct: 122 QNLTGYAADATGKIN 136 Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 15/152 (9%), Positives = 44/152 (28%), Gaps = 12/152 (7%) Query: 98 IILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQK-----G 152 + T + G+ + G + + ++VG G I+ + Sbjct: 250 VAFTGMSIANMDFTGT--TQYGGGFNDTSVTQDGYATGRLASYSVGNDGTITGRYSNGRT 307 Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSM 207 + + + + G + + + ++ +E SN + Sbjct: 308 STLGQIAMTNFKAPDGLQNIGGNQWVETAESGSPQMGTPGMGSFGLLQSSAVEQSNVDLS 367 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E+ MI + + + I ++ + + Sbjct: 368 AELVNMIVAQRSYQANAQTIKTEDQLLQTLVS 399 >gi|237752020|ref|ZP_04582500.1| flagellar hook protein flge [Helicobacter winghamensis ATCC BAA-430] gi|229376587|gb|EEO26678.1| flagellar hook protein flge [Helicobacter winghamensis ATCC BAA-430] Length = 764 Score = 78.8 bits (192), Expect = 6e-13, Method: Composition-based stats. Identities = 29/150 (19%), Positives = 55/150 (36%), Gaps = 22/150 (14%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56 M SF G++ + + + ++N++N +T G+R +F + N I+ Sbjct: 1 MVGSFYNGISGIKTHQFGIDSTSNNIANVNTTGYRGNLPEFKSLFATNLNFINSNSPINN 60 Query: 57 ---SFVASGKEYLSKEVGSFISTGTELDFALEGDAWF---------------ALESPRGI 98 G ++ G+++ + + A G WF + Sbjct: 61 DYNYGATIGSNAINSNDGTYVKADGDFNVAYSGKGWFVVGLDKSGEFDIKSPNYTGTQQN 120 Query: 99 ILTRDGRFKVTDDGSLVSASGKYPVLDMAS 128 TRDG F + +G LV++SG Y Sbjct: 121 FFTRDGSFSLDGEGYLVNSSGYYMYGINLG 150 Score = 72.6 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 22/158 (13%), Positives = 47/158 (29%), Gaps = 18/158 (11%) Query: 100 LTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG 159 LT+ K + + + ++ K D + I + + + + I G Sbjct: 604 LTKSEDGKTSSNFAYTDSTTKSITQDGTASGIMKDIVINKDGIILVNFTNGRTEPIGRFG 663 Query: 160 LYSVDMSQGFVRRENSGISPNIPPTPLEDL------------------SGVTVKRGFLED 201 + + QG + + N + V LE Sbjct: 664 VAAFVNDQGLSKVGGNLFEMNARTINGQTSVVSGPPILAWNEDGLAGLKFGQVMDHMLET 723 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN ++ + +I + + I ++ M EAI+ Sbjct: 724 SNVDTGTALTDLIVYQRGYQMSAKSITTADQLMQEAIQ 761 >gi|149191153|ref|ZP_01869411.1| flagellar hook protein E [Vibrio shilonii AK1] gi|148834991|gb|EDL51970.1| flagellar hook protein E [Vibrio shilonii AK1] Length = 408 Score = 78.8 bits (192), Expect = 6e-13, Method: Composition-based stats. Identities = 39/202 (19%), Positives = 75/202 (37%), Gaps = 11/202 (5%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SF+I L+ A L+T+++N++N T GF+ + +F+ V + + + + + Sbjct: 2 SFSIALSGLNASNSELNTISNNIANVSTTGFKESRTEFASVYSGSEAGGVEVVGVSQNFE 61 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSA----- 117 + G+ TG LD AL G+ +F LE + + TR G F + DG + + Sbjct: 62 -----KSGTVTGTGRSLDMALSGNGFFVLEDSKGQTLYTRSGIFNMNADGVITANSGAAL 116 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177 G + + + + E V V + ++ Sbjct: 117 QGYSVDGNNNLLLGSVGTVQISTASLQARETDSIEFVANLDAREQVPAAAFDYSDSSTYN 176 Query: 178 SPNIPPTPLEDLSGVTVKRGFL 199 P + TV + F+ Sbjct: 177 HSYTTPVYDSLGNPHTVSQYFV 198 Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 18/144 (12%), Positives = 44/144 (30%), Gaps = 10/144 (6%) Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-----EISQKGKVIATMGL 160 V D S V+ G V+ S + G + + ++ + L Sbjct: 263 VTVNIDLSSVTQFGSDFVVSKNSPNGYTSGDYASVRMENDGRIFATYTNGQSQLQGQVVL 322 Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIH 215 Q ++ ++ + + + + G LE SN + E+ ++ Sbjct: 323 ADFAAPQNLIKTSDTAWLQSFSSGTPVLGTAGSGVFGDLTSGALEGSNVDLTSELVALMT 382 Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239 + + + T I +++ Sbjct: 383 AQRNYQANTKSISTSDQLTQALFN 406 >gi|218133669|ref|ZP_03462473.1| hypothetical protein BACPEC_01538 [Bacteroides pectinophilus ATCC 43243] gi|217991044|gb|EEC57050.1| hypothetical protein BACPEC_01538 [Bacteroides pectinophilus ATCC 43243] Length = 420 Score = 78.8 bits (192), Expect = 6e-13, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 36/99 (36%), Gaps = 6/99 (6%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE------DLSGVTVKRGFLE 200 + VI + S + G + + + + + +G ++ G +E Sbjct: 319 YSNGDTVVIGQIATQSFTNAAGLEKVGTNMYAATLNSGEFDGVGEDITSAGGSMVSGTIE 378 Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E MI + F + + +I ++ + E I Sbjct: 379 MSNVDLASEFTDMITTQRGFQANSRIITVSDTMLEELIN 417 Score = 55.6 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 26/157 (16%), Positives = 52/157 (33%), Gaps = 17/157 (10%) Query: 19 LSTVADNMSNTDTVGFRT----------IKVKFSEVVGAIKNDIDQKISFVASGK----- 63 + + +N++N +T+ F++ + + A Q + G Sbjct: 1 MDVIGNNIANVNTIAFKSSSVSFSEVFYQTTQVASGPNATTGKGGQNAKQIGLGTSVGSI 60 Query: 64 EYLSKEVGSFISTGTELDFAL--EGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 G+ T D L G+++F + S TR G F G+LV+ SG Sbjct: 61 STKVDTEGASQRTDNPFDVKLSGSGNSFFIVRSNGNTYFTRAGDFTYDASGALVTQSGAN 120 Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158 + + + +I + + E + T Sbjct: 121 VMGWVTNDQGEIVKDVVQPLYVKSDEFTYTMPEQTTN 157 >gi|23015641|ref|ZP_00055411.1| COG1749: Flagellar hook protein FlgE [Magnetospirillum magnetotacticum MS-1] Length = 804 Score = 78.8 bits (192), Expect = 6e-13, Method: Composition-based stats. Identities = 30/137 (21%), Positives = 49/137 (35%), Gaps = 8/137 (5%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + G++ + + ++DN++N +T G++ KV F +V + V S Sbjct: 6 ALFSGVSGLASQSSAMGAISDNITNVNTTGYKGAKVNFQTLVTKQVSLTSYSPGGVQSKP 65 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGI--------ILTRDGRFKVTDDGSLV 115 G +T D AL G F + + TR G FKV +G L Sbjct: 66 RAAIDSQGLLQATTESTDLALSGQGMFVVNTDPDPATSGNGMFAYTRAGSFKVDKEGYLQ 125 Query: 116 SASGKYPVLDMASVPIQ 132 + SG Y Sbjct: 126 NVSGFYVQGWPLQPTNN 142 >gi|268589982|ref|ZP_06124203.1| flagellar hook protein FlgE [Providencia rettgeri DSM 1131] gi|291314700|gb|EFE55153.1| flagellar hook protein FlgE [Providencia rettgeri DSM 1131] Length = 419 Score = 78.8 bits (192), Expect = 6e-13, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 38/98 (38%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISP-NIPPTPLE----DLSGVTVKRGFLED 201 +Q+ +V+ + L + G V + + + N P++ + G LE Sbjct: 320 YSNQQKRVVGQVALSAFANPNGLVSQGGNVWASSNTSGNPMDGVPGVGQFGKLTSGALES 379 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ MI + + + S I ++ + + Sbjct: 380 SNVDMSQELISMIVMQRNYQSNAQTIKTQDQMLQTLVN 417 Score = 76.8 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 28/129 (21%), Positives = 52/129 (40%), Gaps = 6/129 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SF+ ++ A L ++ +N++N+ T GF+ F+++ + V Sbjct: 2 SFSQAVSGLNAASAGLDSIGNNIANSATNGFKGATTSFADMFAGSGVGL-----GVNVAA 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 + + G T D A+ G+ +F + +RDG+F G+LV+ G Sbjct: 57 VTQNFKDGPITRTDRATDVAISGNGFFRVQDQNGDTYYSRDGQFLRDKSGNLVNNQGMVV 116 Query: 123 VLDMASVPI 131 ASV Sbjct: 117 TGYPASVDE 125 >gi|59712481|ref|YP_205257.1| flagellar hook protein FlgE [Vibrio fischeri ES114] gi|197335363|ref|YP_002156700.1| flagellar hook protein [Vibrio fischeri MJ11] gi|24459277|gb|AAL86630.1| FlgE [Vibrio fischeri ES114] gi|59480582|gb|AAW86369.1| flagellar hook protein FlgE [Vibrio fischeri ES114] gi|197316853|gb|ACH66300.1| flagellar hook protein [Vibrio fischeri MJ11] Length = 432 Score = 78.8 bits (192), Expect = 6e-13, Method: Composition-based stats. Identities = 26/168 (15%), Positives = 64/168 (38%), Gaps = 6/168 (3%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGK 63 + L+ A ++ L+T ++N++N +T GF+ + +F +V + N + K Sbjct: 3 YVALSGLAAAQKDLNTTSNNLANANTYGFKESRAEFGDVYSSSLFSNAKTTTGGGAQTTK 62 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWF----ALESPRGIILTRDGRFKVTDDGSLVSASG 119 GS I T +D + G +F P L+R+G F + ++ + +++ Sbjct: 63 VAQQFHEGSSIYTNNPMDLRISGQGFFAVAKDRLQPATNELSRNGAFHLDNENYVTTSND 122 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 ++ + E + + + ++ ++ Sbjct: 123 EFLLGYEVDPESGNVSSYEPKALKIPDQFGKPKPTENVEIGMNLPATE 170 Score = 67.6 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 24/198 (12%), Positives = 57/198 (28%), Gaps = 9/198 (4%) Query: 48 IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107 D + + + I+ G + G+ L ++ K Sbjct: 236 NGGDSTNAAGQIGHSIIFNNDGTTQSINAGQPVATTTLGENGLNLNGADP---SQTLTMK 292 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV-IATMGLYSVDMS 166 + + + + + + D + G S V + + + V Sbjct: 293 FDNPTQFSAPFEMRRFSEDGATTGYLSKVDIDKSGNIVGSYSNGKDVTLGRVAMVRVTNQ 352 Query: 167 QGFVRRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221 QG + + S S ++ G LE SN + E+ +I + F Sbjct: 353 QGLAQNGGTQWSTTQASGAAIWGEANQGSFGDIQSGTLEQSNIDMTQELVDLISAQRNFQ 412 Query: 222 SITTLIDENEKSMLEAIR 239 + + +D + + ++ Sbjct: 413 ANSRSLDVHNQLQQNILQ 430 >gi|639926|gb|AAA61738.1| flagellar hook polypeptide [Borrelia burgdorferi] Length = 190 Score = 78.8 bits (192), Expect = 6e-13, Method: Composition-based stats. Identities = 26/122 (21%), Positives = 49/122 (40%), Gaps = 12/122 (9%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------------QKISFVASGKEY 65 R+ V +N++N +T+GF+ +V F +++ + Q + Sbjct: 1 RMDVVGNNIANVNTIGFKKGRVNFQDMISQSISGASRPTDARGGTNPKQVGLGMNVASID 60 Query: 66 LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125 G+F ST D + G+ +F L+ + + TR G F V D LV+ + + Sbjct: 61 TIHTQGAFQSTQKASDLGVSGNGFFILKEGKNLFYTRAGAFDVDSDRHLVNPANGMRIQG 120 Query: 126 MA 127 Sbjct: 121 WM 122 >gi|33592479|ref|NP_880123.1| flagellar hook protein FlgE [Bordetella pertussis Tohama I] gi|33572125|emb|CAE41667.1| flagellar hook protein FlgE [Bordetella pertussis Tohama I] gi|332381896|gb|AEE66743.1| flagellar hook protein FlgE [Bordetella pertussis CS] Length = 473 Score = 78.8 bits (192), Expect = 6e-13, Method: Composition-based stats. Identities = 36/189 (19%), Positives = 66/189 (34%), Gaps = 14/189 (7%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 F GL+ A Q L + +N++N+ TVGF++ F++V + + V Sbjct: 2 GFGQGLSGLNAASQNLDVIGNNIANSGTVGFKSGAASFADVYAS-----SRVGLGVKVSA 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRG--IILTRDGRFKVTDDGSLVSASGKY 121 VG+ +TG E D A++G F + + + +R+G F V + +V+A G Sbjct: 57 INQRFTVGNISTTGGEYDMAIDGGKGFFRLTDQSGGVFYSRNGEFMVDKNFYIVNAQGFR 116 Query: 122 PVLDMASVPIQIPQKDEIFNVG-------EKGEISQKGKVIATMGLYSVDMSQGFVRREN 174 A P ++ G + + G V + Sbjct: 117 LTGYPAGGVGAQPVDLQLPQGNIAPQATSTAGLQTNLNANAKVIDPNDTPPEDGLVELDG 176 Query: 175 SGISPNIPP 183 + Sbjct: 177 TTYRFTNAG 185 Score = 75.3 bits (183), Expect = 7e-12, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 32/98 (32%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLED 201 + + + I T+ L + + QG N+ T + LE Sbjct: 374 YTNGETQTIGTLVLANFNNVQGLQPVGNNAWVETSESGQATLGQPGTNGLATIAGQALEA 433 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ MI + + + I ++ M + Sbjct: 434 SNVDMSRELVNMIVAQRTYQANAQTIKTQDEVMQVLMN 471 >gi|28952050|ref|NP_240159.2| flagellar hook protein FlgE [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219681699|ref|YP_002468085.1| flagellar hook protein FlgE [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|257471395|ref|ZP_05635394.1| flagellar hook protein FlgE [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|219624542|gb|ACL30697.1| flagellar hook protein FlgE [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|311086078|gb|ADP66160.1| flagellar hook protein FlgE [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311086649|gb|ADP66730.1| flagellar hook protein FlgE [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] gi|311087235|gb|ADP67315.1| flagellar hook protein FlgE [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] gi|311087754|gb|ADP67833.1| flagellar hook protein FlgE [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 408 Score = 78.8 bits (192), Expect = 7e-13, Method: Composition-based stats. Identities = 26/125 (20%), Positives = 54/125 (43%), Gaps = 3/125 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M ++ LA + +++N++N T+G+++ K F ++ V Sbjct: 1 MSNMI--AISGLLANNDYMEIISNNIANASTIGYKSRKPLFFDMFSHSFYSNTTNGYGVG 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119 + G + TG +LD + D +F ++S + TRDG+F + D ++++ G Sbjct: 59 ISSIIQNFNNGMLVETGRDLDLGIIKDGFFRLVDSQGHVYYTRDGQFFLDKDQNIINIQG 118 Query: 120 KYPVL 124 Y Sbjct: 119 MYLTG 123 Score = 65.7 bits (158), Expect = 5e-09, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 30/99 (30%), Gaps = 6/99 (6%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVK-RG-----FLE 200 +QK + I + L + + S + ++ G LE Sbjct: 308 YCNQKQQTIGQILLSKFINPEKLQPESGNLWSATAESGEAKTAMKAGIQESGVLSNKTLE 367 Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ MI + + S +K + I Sbjct: 368 VSNVDLNKELINMIIAQRNYQSNAQSFKTEDKIINTLIN 406 >gi|300311352|ref|YP_003775444.1| flagellar basal-body rod protein FlgE [Herbaspirillum seropedicae SmR1] gi|300074137|gb|ADJ63536.1| flagellar basal-body rod FlgE protein [Herbaspirillum seropedicae SmR1] Length = 432 Score = 78.8 bits (192), Expect = 7e-13, Method: Composition-based stats. Identities = 27/119 (22%), Positives = 53/119 (44%), Gaps = 5/119 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID--QKISFVAS 61 F GL+ + L + +N++N TVGF+ + +F+++ N V+ Sbjct: 2 GFQQGLSGLNGAAKSLDVIGNNVANASTVGFKQSQAQFADMYANSMNRSGNSPVGIGVSV 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALE---SPRGIILTRDGRFKVTDDGSLVSA 117 G+ S+ LD A+ GD +F L + + + R+G+F++ G +V+ Sbjct: 62 PAVAQQFTQGNISSSNNPLDIAINGDGFFQLSASLTNKSPMYGRNGQFQLDKSGYIVNP 120 Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 33/98 (33%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFL-----ED 201 +Q+ K + T+ L + G N+ + T G L ED Sbjct: 333 YSNQQTKNLGTVVLVNFANPNGLQPLGNNLYQASSAAGSPLVGKPTTGTFGTLQARAKED 392 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ MI + + + + I + + + Sbjct: 393 SNVDLTAELVNMIVAQRVYQANSQTIKVQDTVLQTLVS 430 >gi|163856435|ref|YP_001630733.1| hypothetical protein Bpet2124 [Bordetella petrii DSM 12804] gi|163260163|emb|CAP42465.1| flgE [Bordetella petrii] Length = 413 Score = 78.8 bits (192), Expect = 7e-13, Method: Composition-based stats. Identities = 18/140 (12%), Positives = 37/140 (26%), Gaps = 5/140 (3%) Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 S + S + + + +I T+ L + + Sbjct: 272 TMSYDGVTQYGSDFSPKITQNGYSSGEYSGLSINSDGTLQANYTNGETAIIGTLALANFN 331 Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQK 219 QG N+ + T V +E SN + E+ MI + Sbjct: 332 NVQGLQPVGNNAWAETGASGQPTLGQPGTNGLATVVGQAVEASNVDMSKELVNMIVAQRT 391 Query: 220 FNSITTLIDENEKSMLEAIR 239 + + I ++ M + Sbjct: 392 YQANAQTIKTQDEVMQVLMN 411 Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 34/128 (26%), Positives = 54/128 (42%), Gaps = 7/128 (5%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 F GL+ A Q L + +N++N+ TVGF++ F++V + + V Sbjct: 2 GFGQGLSGLNAAAQNLDVIGNNIANSGTVGFKSATASFADVYASS-----RVGLGVKVSA 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRG--IILTRDGRFKVTDDGSLVSASGKY 121 VG+ TG E D A++G F + + +R+G F V D LV+A G Sbjct: 57 INQRFSVGNVTVTGGEYDIAIDGPKGFFRLTDPSGGVFYSRNGEFLVDKDFYLVNAQGYR 116 Query: 122 PVLDMASV 129 A Sbjct: 117 LTGYAAGA 124 >gi|292489133|ref|YP_003532020.1| flagellar hook protein FlgE [Erwinia amylovora CFBP1430] gi|292900252|ref|YP_003539621.1| flagellar hook protein [Erwinia amylovora ATCC 49946] gi|291200100|emb|CBJ47226.1| flagellar hook protein [Erwinia amylovora ATCC 49946] gi|291554567|emb|CBA22181.1| Flagellar hook protein flgE [Erwinia amylovora CFBP1430] gi|312173291|emb|CBX81546.1| Flagellar hook protein flgE [Erwinia amylovora ATCC BAA-2158] Length = 410 Score = 78.8 bits (192), Expect = 7e-13, Method: Composition-based stats. Identities = 18/124 (14%), Positives = 40/124 (32%), Gaps = 5/124 (4%) Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 D + + + + + ++IA + L + G + N+ + Sbjct: 285 PVKTDGHAAGNYVNFQIGDNGEITANYDNGEKQLIAQVVLANFANPGGLQQNGNNTWVES 344 Query: 181 IPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 S ++ G LE+SN + EM MI + + S + I + + Sbjct: 345 PQSGGSIIGTAGSGSFGSLTGGALENSNVDLGSEMVNMIVYQRNYQSNSQTIKTQSEMLQ 404 Query: 236 EAIR 239 + Sbjct: 405 TLVN 408 Score = 72.2 bits (175), Expect = 6e-11, Method: Composition-based stats. Identities = 30/158 (18%), Positives = 62/158 (39%), Gaps = 7/158 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SF+ GL+ A L V +N++N+ T GF++ + F+++ + V Sbjct: 2 SFSQGLSGLNAAASALDVVGNNIANSQTFGFKSGSIGFADIFA------GAQGMGVQVAG 55 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGKYP 122 + + G TG LD + G+ +F L G +R+G+F +G + + + Sbjct: 56 SGQNFKDGGLTGTGRNLDMGINGNGFFRLMDEAGQAYYSRNGQFDTDVNGYITNLTNGLR 115 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 + + + + + + V +T G Sbjct: 116 LTGYQATGTPPAIQAGAAVAPIQIDKTGMPPVASTSGK 153 >gi|262364764|gb|ACY61321.1| flagellar hook protein [Yersinia pestis D182038] Length = 288 Score = 78.8 bits (192), Expect = 7e-13, Method: Composition-based stats. Identities = 36/132 (27%), Positives = 57/132 (43%), Gaps = 6/132 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SF+I A A ++L+T+++N++N+ T GF+ + +FS + Q + SG Sbjct: 2 SFSIANTALNAHTEQLNTISNNIANSATKGFKASRTEFSSMYAQS-----QPLGVAVSGV 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122 + G TG LD A+ G +F + TR G F+ DG LV+ G Sbjct: 57 SQNISKDGQKEKTGMGLDLAISGGGFFVVRESSGDKAYTRAGMFRSDVDGYLVNGQGMKL 116 Query: 123 VLDMASVPIQIP 134 A I Sbjct: 117 QGYPADAAGNIQ 128 >gi|317047691|ref|YP_004115339.1| flagellar hook-basal body protein [Pantoea sp. At-9b] gi|316949308|gb|ADU68783.1| flagellar hook-basal body protein [Pantoea sp. At-9b] Length = 406 Score = 78.8 bits (192), Expect = 7e-13, Method: Composition-based stats. Identities = 16/142 (11%), Positives = 43/142 (30%), Gaps = 5/142 (3%) Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162 + + + + + P D + +Q+ +++ + L S Sbjct: 263 TLNMQGSLQQNTGTTTFGNPTQDGYAPGDLTTYTINDDGTITGTYSNQQTQLLGQIVLAS 322 Query: 163 VDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217 +G ++ S + ++ G LE SN + E+ MI Sbjct: 323 FSNPEGLQSEGDNVWSATSSSGQAAIGTAGTGTFGSLTAGALEASNVDLSQELVNMIVAQ 382 Query: 218 QKFNSITTLIDENEKSMLEAIR 239 + + + I ++ + + Sbjct: 383 RNYQANAQTIKTQDQILNTLVN 404 Score = 76.1 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 37/195 (18%), Positives = 75/195 (38%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SF+ ++ A L + +N++N+ T GF++ + F+++ + K++ V Sbjct: 2 SFSQAVSGLSAASSNLDVIGNNIANSATAGFKSSTIAFADLFAGSDVGLGTKVAAV---- 57 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122 + G+ +T LD AL G+ +F + + +R+G+F + ++ +LV+ G Y Sbjct: 58 -IQNFNDGTTTTTSRGLDVALSGNGFFRMTDSSGAVYYSRNGQFTLDENRNLVNTQGLYV 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 AS Q K T + S + + S N+ Sbjct: 117 TGYPASGSPATIQTGANPVALSIPTTQMSAKATTTATQVANLNSTSDIPSVTTFDSSNVD 176 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 177 SYNAKSTMTVYDSQG 191 >gi|315180485|gb|ADT87399.1| flagellar hook protein E [Vibrio furnissii NCTC 11218] Length = 397 Score = 78.8 bits (192), Expect = 7e-13, Method: Composition-based stats. Identities = 44/189 (23%), Positives = 73/189 (38%), Gaps = 13/189 (6%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SFNI L+ A Q L+T+++N++N T GF+ + +F V + Q G Sbjct: 2 SFNIALSGLNASNQELNTISNNIANVSTTGFKESRTEFGSVY-----NGQQAGGVQVMGI 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLVSASGKYP 122 + GS +TG LD AL G +F ++ G + TR G F + G+++S +G Sbjct: 57 SQNFEATGSMSATGRSLDMALTGSGFFVVQDKNGQLSYTRSGVFGLDSQGNVISNTGGSL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + G G + + VD + R ++ + P Sbjct: 117 QGYTVDGNNNLL-------AGSMGPLKVDMSSLEAKATNKVDFAANLDDRVDAIDTTENP 169 Query: 183 PTPLEDLSG 191 P S Sbjct: 170 FDPKNVDSY 178 Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 12/105 (11%), Positives = 35/105 (33%), Gaps = 5/105 (4%) Query: 142 VGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKR 196 + + + + + L + + Q ++ N+ + + Sbjct: 293 MVYATYSNGQSLLQGQLVLANFNAPQELMQTSNTAWTQTYGSGQPVYGIPGSGQFGELAS 352 Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 G LE SN + E+ ++ + + + T I ++ M+ + Sbjct: 353 GVLEGSNVDLTSELVHLMSAQRNYQANTKTITTADQLMMSLFNAV 397 >gi|259907634|ref|YP_002647990.1| Flagellar hook protein FlgE [Erwinia pyrifoliae Ep1/96] gi|224963256|emb|CAX54740.1| Flagellar hook protein FlgE [Erwinia pyrifoliae Ep1/96] gi|283477476|emb|CAY73392.1| flgE [Erwinia pyrifoliae DSM 12163] Length = 410 Score = 78.4 bits (191), Expect = 7e-13, Method: Composition-based stats. Identities = 18/124 (14%), Positives = 40/124 (32%), Gaps = 5/124 (4%) Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 D + + + + + ++IA + L + G + N+ + Sbjct: 285 PVKTDGHAAGNYVNFQIGDNGEITANYDNGEKQLIAQVVLANFANPGGLQQNGNNTWVES 344 Query: 181 IPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 S ++ G LE+SN + EM MI + + S + I + + Sbjct: 345 PQSGGSIIGTAGTGSFGSLTGGALENSNVDLGSEMVNMIVYQRNYQSNSQTIKTQSEMLQ 404 Query: 236 EAIR 239 + Sbjct: 405 TLVN 408 Score = 73.0 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 61/158 (38%), Gaps = 7/158 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SF+ GL+ A L V +N++N+ T GF+ + F+++ + V Sbjct: 2 SFSQGLSGLNAAASALDVVGNNIANSQTFGFKAGSIGFADIFA------GAQGMGVQVAG 55 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGKYP 122 + + G TG +D + G+ +F L G +R+G+F +G + + + Sbjct: 56 SSQNFKDGGLTGTGRNMDMGINGNGFFRLMDEAGQAYYSRNGQFDTDVNGYITNLTNGLR 115 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 + + + + + + V +T G Sbjct: 116 LTGYQATGTPPAIQAGAAVAPIQIDKTGMPPVASTSGK 153 >gi|224436455|ref|ZP_03657469.1| flagellar hook protein FlgE [Helicobacter cinaedi CCUG 18818] gi|313142967|ref|ZP_07805160.1| flagellar hook protein FlgE [Helicobacter cinaedi CCUG 18818] gi|313127998|gb|EFR45615.1| flagellar hook protein FlgE [Helicobacter cinaedi CCUG 18818] Length = 745 Score = 78.4 bits (191), Expect = 7e-13, Method: Composition-based stats. Identities = 28/150 (18%), Positives = 55/150 (36%), Gaps = 22/150 (14%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-------D 53 M ++ + + L ++++N++N +T+G+R +F + + + + Sbjct: 1 MNSTLINSYSGIKTHQFGLDSISNNIANVNTIGYRRNIPQFESLFSTNMDSLNADSPINN 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA---------------LESPRGI 98 +S GS+ ++ E + A EG WF E + Sbjct: 61 DMNYGATKSSNAISTRSGSYKASDGEFNVAYEGKGWFVVGEQKSGSFEIKDDGYEKKQKN 120 Query: 99 ILTRDGRFKVTDDGSLVSASGKYPVLDMAS 128 TRDG F +G +V+ SG Y Sbjct: 121 YFTRDGSFLRDGEGYIVNTSGYYMYGVDLG 150 Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 16/102 (15%), Positives = 38/102 (37%), Gaps = 15/102 (14%) Query: 153 KVIATMGLYSVDMSQGFVRRENS----------GISPNIPPTPLEDLSGVTVKRGF---- 198 + + +G+ + QG + + G + I P+ G+ +K G Sbjct: 641 EPMGRVGIAAFVNDQGLRKVGGNLFEMTEMVVNGDASTISGKPILGWEGLNLKFGSVLYK 700 Query: 199 -LEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 LE SN + + ++I + + ++ + + EA+ Sbjct: 701 HLETSNVDVGNALTELIVMQRGYSMNAKAFTTGDDLVKEALN 742 >gi|148256818|ref|YP_001241403.1| putative flagellar hook protein flgE [Bradyrhizobium sp. BTAi1] gi|146408991|gb|ABQ37497.1| putative Flagellar hook protein flgE [Bradyrhizobium sp. BTAi1] Length = 601 Score = 78.4 bits (191), Expect = 7e-13, Method: Composition-based stats. Identities = 26/139 (18%), Positives = 56/139 (40%), Gaps = 11/139 (7%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + N ++ A L ++ N++N TVG++ I F +++ N Q V + Sbjct: 6 AMNTSVSGLSAQSFALQNISGNIANASTVGYKGIGTSFEDLIPNATNPTRQNAGGVTAFA 65 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRG-----------IILTRDGRFKVTDDG 112 + G+ ++ + A+ GD +F ++ TR G F++ +G Sbjct: 66 KATITTQGTVSTSSVATNMAINGDGFFNVQKASSVVDNVPVFTGVTNYTRRGDFQLNANG 125 Query: 113 SLVSASGKYPVLDMASVPI 131 +L++ +G Y + Sbjct: 126 NLINGAGYYLMGVAVDPKT 144 Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats. Identities = 12/92 (13%), Positives = 31/92 (33%) Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEM 210 + +A + L + + + + + G LE SN + E Sbjct: 510 QTINLAQVTLSHFNGTNYLKALDGGAYEATDQSGQAIIGASGKISGGSLEGSNTDIADEF 569 Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 ++I Q +++ T +I + + + + Sbjct: 570 TKLIVTQQAYSANTKVITTANSMVQDLLNVLR 601 >gi|219682254|ref|YP_002468638.1| flagellar hook protein FlgE [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219621987|gb|ACL30143.1| flagellar hook protein FlgE [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] Length = 408 Score = 78.4 bits (191), Expect = 8e-13, Method: Composition-based stats. Identities = 26/125 (20%), Positives = 54/125 (43%), Gaps = 3/125 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M ++ LA + +++N++N T+G+++ K F ++ V Sbjct: 1 MSNMI--AISGLLANNDYMEIISNNIANASTIGYKSRKPLFFDMFSHSFYSNTTNGYGVG 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASG 119 + G + TG +LD + D +F ++S + TRDG+F + D ++++ G Sbjct: 59 ISSIIQNFNNGMLVETGRDLDLGIIKDGFFRLVDSQGHVYYTRDGQFFLDKDQNIINIQG 118 Query: 120 KYPVL 124 Y Sbjct: 119 MYLTG 123 Score = 65.7 bits (158), Expect = 6e-09, Method: Composition-based stats. Identities = 15/99 (15%), Positives = 29/99 (29%), Gaps = 6/99 (6%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVK------RGFLE 200 +QK + I + L + + S + ++ LE Sbjct: 308 YCNQKQQTIGQILLSKFINPEKLQPESGNLWSATAESGEAKTAMKAGIQESGVLSNKTLE 367 Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ MI + + S +K + I Sbjct: 368 VSNVDLNKELINMIIAQRNYQSNAQSFKTEDKIINTLIN 406 >gi|296123915|ref|YP_003631693.1| flagellar basal body FlaE domain protein [Planctomyces limnophilus DSM 3776] gi|296016255|gb|ADG69494.1| flagellar basal body FlaE domain protein [Planctomyces limnophilus DSM 3776] Length = 562 Score = 78.4 bits (191), Expect = 8e-13, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 56/157 (35%), Gaps = 12/157 (7%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------KN 50 ++ N L E + + +N++N T GF+ V+F + + Sbjct: 5 SALNTSLNGLSLNEVTIDVLGNNIANAGTNGFKASTVRFQTQLARTLSIGSRPTATDGGS 64 Query: 51 DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTD 110 + Q + GS ++ + D A++G+ +F ++ G TR+G F + Sbjct: 65 NPRQVGLGATTSAISKDFTQGSLSNSTSASDLAIQGEGFFVMDGSSGRTYTRNGNFLRSS 124 Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGE 147 D LV+ G++ I GE Sbjct: 125 DSYLVNDQGQFVQGYGIDDEFNIVTTQLSPLRIPLGE 161 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 25/205 (12%), Positives = 60/205 (29%), Gaps = 12/205 (5%) Query: 39 VKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98 F + + ++ ++ + L+ D + Sbjct: 361 TTFRYFLESAQDSRPGVAIGTGLITFDSDGKITGDTTQMFTLE---RSDTAAVSPMQIEM 417 Query: 99 ILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158 L++ GS ++ S + I ++ I + + G I G+V+ Sbjct: 418 DLSQISGISSAQSGSALNLSNQNGSKPGTLQSYVIDEQGLINGIFDNGLIRSLGQVV--- 474 Query: 159 GLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQM 213 L S G + + + + +S T+ G +E SN + + + Sbjct: 475 -LARFANSDGLLEAGGTAFREGVSSGVPQIVSPGSFGAGTIASGKIELSNTDIGRNLVDL 533 Query: 214 IHLTQKFNSITTLIDENEKSMLEAI 238 I + + +I + E + Sbjct: 534 IVASTNYRGNARVISSVQDLTNELL 558 >gi|315497293|ref|YP_004086097.1| fagellar hook-basal body protein [Asticcacaulis excentricus CB 48] gi|315415305|gb|ADU11946.1| fagellar hook-basal body protein [Asticcacaulis excentricus CB 48] Length = 459 Score = 78.4 bits (191), Expect = 8e-13, Method: Composition-based stats. Identities = 35/167 (20%), Positives = 69/167 (41%), Gaps = 5/167 (2%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 ++ G++A A L+ +++N++N +T ++++ F+ V + + AS Sbjct: 5 SAMLSGVSALSANSTALAAISNNIANVNTTAYKSVSTSFAANVSSSGSSTYSSGGVSAST 64 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESPRG----IILTRDGRFKVTDDGSLVSAS 118 E G+ +T + LD A++G +F + TRDG F V D+G LV++S Sbjct: 65 ALS-ITEAGALQTTTSSLDLAIDGSGFFVVSEGADGSGGSYYTRDGSFSVNDEGYLVNSS 123 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 G Y A + + ++ + AT + Sbjct: 124 GYYLQGWQADSSGNVTAASSVSDLSAIKIPTSSDTPTATTSISLAAN 170 Score = 68.7 bits (166), Expect = 6e-10, Method: Composition-based stats. Identities = 11/97 (11%), Positives = 34/97 (35%), Gaps = 5/97 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLED 201 +V+A + + + + G + + + + + LE Sbjct: 359 YEDGTSRVLAQIPVATFVNANGLTAKSGNVYALSSESGSYTLRTPGSGGAGLLASSSLEA 418 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S + E +I + + +++ + +I +++ M I Sbjct: 419 STVDLSSEFTSLITIQRAYSAASKIITTSDEMMQTVI 455 >gi|310764860|gb|ADP09810.1| Flagellar hook protein FlgE [Erwinia sp. Ejp617] Length = 410 Score = 78.4 bits (191), Expect = 8e-13, Method: Composition-based stats. Identities = 18/124 (14%), Positives = 40/124 (32%), Gaps = 5/124 (4%) Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 D + + + + + ++IA + L + G + N+ + Sbjct: 285 PVKTDGHAAGNYVNFQIGDNGEITANYDNGEKQLIAQVVLANFANPGGLQQNGNNTWVES 344 Query: 181 IPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 S ++ G LE+SN + EM MI + + S + I + + Sbjct: 345 PQSGGSIIGMAGTGSFGSLTGGALENSNVDLGSEMVNMIVYQRNYQSNSQTIKTQSEMLQ 404 Query: 236 EAIR 239 + Sbjct: 405 TLVN 408 Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 61/158 (38%), Gaps = 7/158 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SF+ GL+ A L V +N++N+ T GF+ + F+++ + V Sbjct: 2 SFSQGLSGLNAAASALDVVGNNIANSQTFGFKAGSIGFADIFA------GAQGMGVQVAG 55 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGKYP 122 + + G TG +D + G+ +F L G +R+G+F +G + + + Sbjct: 56 SSQNFKDGGLTGTGRNMDMGINGNGFFRLMDEAGQAYYSRNGQFDTDVNGYITNLTNGLR 115 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 + + + + + + V +T G Sbjct: 116 LTGYQATGTPPAIQAGAAVAPIQIDKTGMPPVASTSGK 153 >gi|307719963|ref|YP_003891103.1| flagellar hook-basal body protein [Sulfurimonas autotrophica DSM 16294] gi|306978056|gb|ADN08091.1| flagellar hook-basal body protein [Sulfurimonas autotrophica DSM 16294] Length = 420 Score = 78.4 bits (191), Expect = 9e-13, Method: Composition-based stats. Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 7/136 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN-------DID 53 M +F G++ + V+DNM+N DT+GFR +FS + + + Sbjct: 2 MTQAFYTGISGIKTNSTGIDIVSDNMANIDTIGFRGNDYEFSSLFENMLSTDTLGTPSNS 61 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113 + ++ GSF+ + D AL D WF ++ + TRDG F D Sbjct: 62 SIGVGSQLQASPMVQQKGSFMISDKSTDLALFEDGWFGIKGNGNTLYTRDGNFTFDKDDD 121 Query: 114 LVSASGKYPVLDMASV 129 LV+ G + + M + Sbjct: 122 LVTQDGFHVLGTMGNN 137 Score = 59.5 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 38/93 (40%), Gaps = 8/93 (8%) Query: 155 IATMGLYSVDMSQGFVR--------RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANS 206 + + +Y QG R NSG + E++ G + LE SN Sbjct: 325 VGKIAVYHFQNDQGLNRISGTRFQESTNSGKALFFKDEKGENIIGTNMANFKLEGSNIEM 384 Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 Y + ++I L + +++ + + ++ M +A+ Sbjct: 385 SYGLTELIILQRAYDANSKSVTTADQMMQKALN 417 >gi|220922287|ref|YP_002497589.1| flagellar basal body FlaE domain-containing protein [Methylobacterium nodulans ORS 2060] gi|219946894|gb|ACL57286.1| flagellar basal body FlaE domain protein [Methylobacterium nodulans ORS 2060] Length = 456 Score = 78.4 bits (191), Expect = 9e-13, Method: Composition-based stats. Identities = 35/142 (24%), Positives = 57/142 (40%), Gaps = 14/142 (9%) Query: 1 MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 M ++ ++ A L ++ N++N T G+R I F +++ S Sbjct: 1 MDVFSALQTAVSGLKAQAFSLDNISGNIANAQTTGYRRIDTTFVDLLAEQPVKSQTSGS- 59 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP-----------RGIILTRDGRFK 107 VA+ + + G+ STG + AL GD +F + P + TR G F Sbjct: 60 VAAYSQLTNTLQGNLTSTGIGTNMALNGDGFFVVRIPGTDTAGQRSFSSENLYTRRGDFT 119 Query: 108 VTDDGSLVSASGKYPVLDMASV 129 V DG LV+ +G Y V Sbjct: 120 VDKDGFLVNGAGSYLVGQSLDP 141 Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 28/201 (13%), Positives = 61/201 (30%), Gaps = 4/201 (1%) Query: 44 VVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103 + A +N S + + ++ T A+ + T Sbjct: 258 LFYAAQNGTTSASSTWKNVGTAFTFNASGQLTAPTGGTLAIPNVTVDGTSLGTLTLDTGS 317 Query: 104 GRF-KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162 G + V+ + + + + G + +A +G+ Sbjct: 318 GGLTQYGAANGQVTTNTLQQNGYASGTLTALAVTSDGKITGTY--SNGNDLALAQVGVVR 375 Query: 163 VDMSQGFVRRENSGISPNIP-PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221 + + PL L G TV G +E SN ++ E ++I Q ++ Sbjct: 376 FNAPDALRAESLGNYARTADSGEPLIGLKGATVVGGNVEQSNTDTANEFSKLIITQQAYS 435 Query: 222 SITTLIDENEKSMLEAIRNIA 242 + T ++ ++ M + I I Sbjct: 436 ANTRVMSTAQQMMTDLINIIR 456 >gi|209695762|ref|YP_002263692.1| flagellar hook protein FlgE [Aliivibrio salmonicida LFI1238] gi|208009715|emb|CAQ80019.1| flagellar hook protein FlgE [Aliivibrio salmonicida LFI1238] Length = 432 Score = 78.4 bits (191), Expect = 9e-13, Method: Composition-based stats. Identities = 26/168 (15%), Positives = 63/168 (37%), Gaps = 6/168 (3%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGK 63 + L+ A ++ L+T ++N++N +T GF+ + +F +V + N + K Sbjct: 3 YVALSGLSAAQKDLNTTSNNLANANTFGFKESRAEFGDVYSSSLFSNTKTTTGGGAQTTK 62 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWF----ALESPRGIILTRDGRFKVTDDGSLVSASG 119 GS I T +D + G +F P L+R+G F + + + +++ Sbjct: 63 IAQQFHEGSSIYTNNPMDLRISGQGFFGVAKDRLQPGTNELSRNGAFHLDKENYVTTSND 122 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 ++ + + + + + ++ S+ Sbjct: 123 EFLLGYDVDPESGNVSSYQPKALKIPDQFGKPRATENVDIGMNLPASE 170 Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 24/212 (11%), Positives = 60/212 (28%), Gaps = 9/212 (4%) Query: 34 FRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE 93 + + + + V D V + + ++ G + G + Sbjct: 222 YSSTDTEGEKAVNINAGDATNAAGQVGHSIVFNNDGTTQSVNAGQPVTTTPLGANGLNMN 281 Query: 94 SPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK 153 + K + + + + + + D + G S Sbjct: 282 GADTQ---QTLTMKFDNPTQFSAPFEMRRFSEDGATTGYLSKVDIDKSGNIVGSYSNGKD 338 Query: 154 V-IATMGLYSVDMSQGFVRRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSNANSM 207 V + + + V QG + + S S ++ G LE SN + Sbjct: 339 VTLGRVAMVRVTNQQGLAQNGGTQWSTTQASGAAIWGEANQGSFGDIQSGTLEQSNIDMT 398 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E+ +I + F + + +D + + ++ Sbjct: 399 QELVDLISAQRNFQANSRALDVHNQLQQNILQ 430 >gi|311105935|ref|YP_003978788.1| flagellar hook protein FlgE [Achromobacter xylosoxidans A8] gi|310760624|gb|ADP16073.1| flagellar hook protein FlgE [Achromobacter xylosoxidans A8] Length = 491 Score = 78.0 bits (190), Expect = 9e-13, Method: Composition-based stats. Identities = 33/155 (21%), Positives = 62/155 (40%), Gaps = 7/155 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 F GL+ A Q L + +N++N+ TVGF++ F++V + + V Sbjct: 2 GFGQGLSGLNAAAQNLDVIGNNIANSGTVGFKSATASFADVYAS-----SRVGLGVKVAA 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRG--IILTRDGRFKVTDDGSLVSASGKY 121 VG+ G E D A++G + + ++ TR+G F V + +V+A G Sbjct: 57 INQRFTVGTVNGGGGEYDIAIDGAKGMFRVTDQSGAVMYTRNGEFLVDKNNFIVNAQGYR 116 Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156 P + ++ + + G +A Sbjct: 117 LTGYPPGSVGANPVELQLPTANVAPKATSTGTTVA 151 Score = 72.2 bits (175), Expect = 6e-11, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 32/98 (32%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLED 201 + + +++ T+ L QG N+ + + V E Sbjct: 392 YTNGETQIVGTIVLADFSNLQGLQPVGNNAWTETSASGQPILGQPGSNGLSKVVGQATES 451 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ MI + + + + I ++ M + Sbjct: 452 SNVDMSKELVNMIIAQRTYQANSQTIKTQDEIMQVLMN 489 >gi|144900942|emb|CAM77806.1| flagellar hook protein FlgE precursor [Magnetospirillum gryphiswaldense MSR-1] Length = 430 Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 28/115 (24%), Positives = 45/115 (39%), Gaps = 3/115 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + N + A A LS ++DN+SN+ T G++ F +V + V + Sbjct: 6 AMNSAVTALKAQSTALSIISDNLSNSSTTGYKANTTSFKTLVTQSYSSTSYASGGVTASV 65 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALES---PRGIILTRDGRFKVTDDGSLV 115 G T D AL+GD +F + TRDG F++ G + Sbjct: 66 RQNVAAQGVISGTSNSTDLALDGDGFFVVSYGATGEETFFTRDGEFEIDSAGFMC 120 Score = 62.2 bits (149), Expect = 6e-08, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 46/138 (33%) Query: 100 LTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG 159 LT+ D S+ S +G S + + +I+ +A Sbjct: 288 LTQFSSNSDDPDISITSITGDGVEYGALSSVEVDKKGVIWAHFDNGQDIAIYKLAVADFT 347 Query: 160 LYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 + +QG+ + + S + + T+ LE S ++ E +MI Q Sbjct: 348 NANGLENQGYGVYQQTSASGDFTLHEAGEDGVATITPSALESSTVDTSDEFTRMIVAQQA 407 Query: 220 FNSITTLIDENEKSMLEA 237 +++ + +I + Sbjct: 408 YSAASQVISTASDMFDDL 425 >gi|317406201|gb|EFV86450.1| flagellar hook protein FlgE [Achromobacter xylosoxidans C54] Length = 495 Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 34/155 (21%), Positives = 65/155 (41%), Gaps = 7/155 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 F GL+ A Q L + +N++N+ TVGF++ F++V + + + K++ + Sbjct: 2 GFGQGLSGLNAAAQNLDVIGNNIANSGTVGFKSSTASFADVYASSRVGLGTKVAAI---- 57 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRG--IILTRDGRFKVTDDGSLVSASGKY 121 VG+ G E D A++G + I+ TR+G F V + +V+A G Sbjct: 58 -TQRFTVGTVNGGGGEYDIAIDGAKGMFRVTDESGAIMYTRNGEFLVDKNNFIVNAQGYR 116 Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156 A P + ++ + + +A Sbjct: 117 LTGYPAGAIGANPVELQLPTANVAPKATTTATTVA 151 Score = 72.2 bits (175), Expect = 6e-11, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 30/98 (30%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLED 201 + + ++ T+ L QG N+ + V E Sbjct: 396 YTNGETSIVGTIVLADFANLQGLQPVGNNAWKETATSGQPILGQPGSNGLSKVVGQATES 455 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ MI + + + + I ++ M + Sbjct: 456 SNVDMSKELVNMIIAQRTYQANSQTIKTQDEIMQVLMN 493 >gi|238796904|ref|ZP_04640408.1| Flagellar basal body FlaE domain protein [Yersinia mollaretii ATCC 43969] gi|238719164|gb|EEQ10976.1| Flagellar basal body FlaE domain protein [Yersinia mollaretii ATCC 43969] Length = 407 Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 33/134 (24%), Positives = 61/134 (45%), Gaps = 6/134 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 F+ GL+ A Q L V +N++N+ TVGF++ + F++V Q V Sbjct: 2 GFSQGLSGLNAASQALDVVGNNIANSQTVGFKSGSIAFADVFA-----GSQVGMGVQVSS 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122 + G S + LD ++G+ +F L + + +R+G+FK ++G +++ G + Sbjct: 57 VNQNFSDGVLGSGASSLDMGIQGNGFFRLTNEAGRVFYSRNGQFKQDENGFIINNQGMFL 116 Query: 123 VLDMASVPIQIPQK 136 AS Q Sbjct: 117 TGYQASGTPPAIQP 130 Score = 69.1 bits (167), Expect = 4e-10, Method: Composition-based stats. Identities = 14/123 (11%), Positives = 35/123 (28%), Gaps = 5/123 (4%) Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI-SPN 180 P + + + +++ + L + G + ++ Sbjct: 283 PTTTGYAPGQMNGYTVGDNGQIIASYSNGQQQLLGQVVLSNFTNPGGLSSQGDNCWSETP 342 Query: 181 IPPTPLE----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 P++ + + LE SN + EM MI + + S + I + + Sbjct: 343 ASGQPVDGIAGTGNLGNLFGNRLEASNVDLSKEMVNMIVYQRNYQSNSQTIKTQSELLQI 402 Query: 237 AIR 239 Sbjct: 403 LAN 405 >gi|159045919|ref|YP_001534713.1| flagellar hook protein FlgE [Dinoroseobacter shibae DFL 12] gi|157913679|gb|ABV95112.1| flagellar hook protein FlgE [Dinoroseobacter shibae DFL 12] Length = 434 Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 60/163 (36%), Gaps = 9/163 (5%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 +S N G++ A RL+T++DN++N+ T G++ + F +V + V Sbjct: 5 SSLNAGVSGLNANATRLATISDNIANSSTYGYKRAEADFQSLVINGNSSGTYSAGGVRVT 64 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALES---------PRGIILTRDGRFKVTDDGS 113 + E G ++T D A+ G + + + L G F DG Sbjct: 65 TTRVIDEQGPLVTTSNPTDLAVGGSGMLPVTTLSALDENTGGYPLSLMTTGSFSPNADGV 124 Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156 L + +G + A+ +P+ G + + Sbjct: 125 LTTETGMVLMGWPAAPDGTVPEFPRDTVDGLEPITVNLNQFAG 167 Score = 72.6 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 36/98 (36%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLED 201 + + I + L V G + R+N + P + V LE+ Sbjct: 334 YDTGFTRTIYQVPLADVPNPNGLLSRDNQSYMISPESGPFFLWNAGEGPTGDVIGFALEE 393 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S A+ E+ ++I + ++S +I ++ + E Sbjct: 394 SAADVAGELTRLITTQRAYSSNAKIIQTVDEMLQETTN 431 >gi|307945688|ref|ZP_07661024.1| flagellar basal body FlaE domain protein [Roseibium sp. TrichSKD4] gi|307771561|gb|EFO30786.1| flagellar basal body FlaE domain protein [Roseibium sp. TrichSKD4] Length = 459 Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 31/191 (16%), Positives = 66/191 (34%), Gaps = 12/191 (6%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + N ++ A + L ++ N++N+ T G++ + F+++V + ++S Sbjct: 6 AINSAVSGLTAQSRALENISGNVANSQTTGYKRLDTTFADLVSGGGSRQATQVSGTTYAT 65 Query: 64 EY-LSKEVGSFISTGTELDFALEGDAWF-----------ALESPRGIILTRDGRFKVTDD 111 + G + A+ G+ +F TR G F+ + Sbjct: 66 SRATNTLQGDIAARDVGTYMAINGEGYFIVTEANAVVDGTTSFEETDYYTRAGDFERDQN 125 Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171 G LV++SG Y + P D V + K A ++ + R Sbjct: 126 GYLVNSSGYYLQGFELNPDTGNPVGDTPEVVQISDQPLPANKTTAINYQANLPPTPETNR 185 Query: 172 RENSGISPNIP 182 +++ N Sbjct: 186 AKSNPDLANSD 196 Score = 61.4 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 13/120 (10%), Positives = 42/120 (35%), Gaps = 1/120 (0%) Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN-IP 182 D + + + + + + + L + + R + + + Sbjct: 340 QDGYPAGELVGIAVDSSGRVNASYSNSQTRALYEIPLATFEAEFELRRVDGAAFAATSTS 399 Query: 183 PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 P+ S + +E SNA+ E ++I Q +++ + ++ ++ + A+ + Sbjct: 400 GAPVLISSNGNIVPEAVELSNADIATEFSKLIVTQQAYSANSRIVTSADEMLDSALNMVR 459 >gi|300716218|ref|YP_003741021.1| flagellar biosynthesis, hook protein [Erwinia billingiae Eb661] gi|299062054|emb|CAX59170.1| Flagellar biosynthesis, hook protein [Erwinia billingiae Eb661] Length = 414 Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 18/144 (12%), Positives = 44/144 (30%), Gaps = 5/144 (3%) Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 T + + + +++ P D + +++ + + + L Sbjct: 269 TFNLNLAGSQQQNTGTSTFGNPTQDGYKPGDLTSYQINNDGTVVGTYSNEQTQTLGQIAL 328 Query: 161 YSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIH 215 + +G N+ S + T+ G LE SN + E+ MI Sbjct: 329 ANFANPEGLKSEGNNVWSATNSSGQALVGLAGTGNLGTLTAGALESSNVDLSKELVNMIV 388 Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239 + + S I ++ + + Sbjct: 389 AQRNYQSNAQTIKTQDQILNTLVN 412 Score = 72.6 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 33/192 (17%), Positives = 66/192 (34%), Gaps = 15/192 (7%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ TVGF++ V F+++ K + V Sbjct: 2 AFSQAVSGLNAASSNLDVIGNNIANSATVGFKSATVSFADMFADSKVGL-----GVKVAA 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122 G+ ST LD A+ +F + + +R+G+F + + ++V+A G Sbjct: 57 VTQDFNDGTTTSTSRGLDVAISQSGFFRMTDTSGAVYYSRNGQFTLDANRNIVNADGLQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + G V T + V NS S Sbjct: 117 TG---------YPATGTPPTVQTGANPVALNVPTTAMSAKATSAAALVANLNSTDSTPTK 167 Query: 183 PTPLEDLSGVTV 194 + ++ Sbjct: 168 DWATTNTDLSSI 179 >gi|156934440|ref|YP_001438356.1| flagellar hook protein FlgE [Cronobacter sakazakii ATCC BAA-894] gi|156532694|gb|ABU77520.1| hypothetical protein ESA_02271 [Cronobacter sakazakii ATCC BAA-894] Length = 409 Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 70/172 (40%), Gaps = 6/172 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ V F+++ K + K++ + Sbjct: 2 AFSQAVSGLNAASTNLDVIGNNIANSATYGFKSGSVSFADMFAGSKAGLGVKVAGI---- 57 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G +TG +LD A+ + +F L+S G+ +R+G+FK+ + +LV+ G Sbjct: 58 -TQDFGDGVTTNTGRKLDVAISQNGFFRLLDSNGGVFYSRNGQFKLDEKSNLVNMQGMQV 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174 A+ Q+ + S V ++ Sbjct: 117 TGYPATGTPPTIQQGADPIPLTIPTAQMPASQTTSANFVMNLNSSDDVPAQS 168 Score = 76.1 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + + + ++K +++ + L + +G + ++ S + Sbjct: 286 NQNGYKPGDLVGYQVNEDGSLVGNYSNEKSQLLGQIVLANFANPEGLSSQGDNVWSASTA 345 Query: 183 PTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + + G LE SN + E+ MI + + S I ++ + Sbjct: 346 SGVALLGSAGTGNFGKLTSGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 405 Query: 238 IR 239 + Sbjct: 406 VN 407 >gi|90422390|ref|YP_530760.1| flagellar hook protein FlgE [Rhodopseudomonas palustris BisB18] gi|90104404|gb|ABD86441.1| flagellar basal body FlaE [Rhodopseudomonas palustris BisB18] Length = 419 Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 30/133 (22%), Positives = 58/133 (43%), Gaps = 3/133 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + + ++A A ++ ++DN++N+ TVG++T F +V + + V + Sbjct: 6 ALSSAISALSAQSSAMAMISDNIANSQTVGYKTTSASFQALVTSSSSATTYSSGGVTTLS 65 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALE---SPRGIILTRDGRFKVTDDGSLVSASGK 120 E G +T + D + G+ +F + + + TR G F + D G LVS+ G Sbjct: 66 RSNISEQGLLTTTTSATDIGISGNGFFPVTTALTGGSTLYTRSGSFTIDDSGYLVSSGGA 125 Query: 121 YPVLDMASVPIQI 133 Y + I Sbjct: 126 YLLGWRTDADGNI 138 >gi|323137001|ref|ZP_08072081.1| fagellar hook-basal body protein [Methylocystis sp. ATCC 49242] gi|322397762|gb|EFY00284.1| fagellar hook-basal body protein [Methylocystis sp. ATCC 49242] Length = 417 Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 2/126 (1%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 FN + A L+ +++N++N+ TVG++ F V+ + +Q V++ Sbjct: 8 FNTSIMGMSAQSDALANISENIANSGTVGYKRATTHFLTVLSGFQ-GSNQFGGGVSTRSR 66 Query: 65 YLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYPV 123 Y G+ + TG+ D A+ G+ +F + G LTR G F G LV+A+G Y + Sbjct: 67 YDITGQGALMHTGSSTDMAIRGNGFFVVSDGAGGTFLTRAGSFVPDSSGRLVNAAGYYLM 126 Query: 124 LDMASV 129 A Sbjct: 127 GFPAGP 132 Score = 56.0 bits (133), Expect = 4e-06, Method: Composition-based stats. Identities = 12/96 (12%), Positives = 31/96 (32%), Gaps = 6/96 (6%) Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNAN 205 + +G+ +V + + P+ + + LE SN + Sbjct: 322 QMVPAYLIGIANVAAPTELASYTGNVYTATGASGPISVGAPGKGGFGDIASATLEASNVD 381 Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 E+ MI + + + T + + + + N+ Sbjct: 382 LATELSTMIIAQRSYTANTQSFQVASEIL-QVLNNL 416 >gi|85706142|ref|ZP_01037237.1| flagellar hook protein FlgE, putative [Roseovarius sp. 217] gi|85669306|gb|EAQ24172.1| flagellar hook protein FlgE, putative [Roseovarius sp. 217] Length = 448 Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 35/165 (21%), Positives = 68/165 (41%), Gaps = 10/165 (6%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 +S N +A A RL+T++DN++N+ T G+R ++ F +V + + V + Sbjct: 20 SSLNASVAGLNANATRLATISDNIANSSTFGYRRVEADFESLVISGRGGSYSAG-GVRAS 78 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFAL---------ESPRGIILTRDGRFKVTDDGS 113 + L + GS +S+ D A+ + + ++LT G F+ G Sbjct: 79 TQRLIDQGGSIVSSSNPTDLAVRDRGFLPVARVTDLTVSNGDPQMLLTTTGSFRTDPQGR 138 Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158 LV+ SG + A+ IP+ + G + ++ Sbjct: 139 LVTESGLVLLGWPANPDGTIPEFSRDTSGGLEPVQINVNQLTGEP 183 Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats. Identities = 16/123 (13%), Positives = 38/123 (30%), Gaps = 5/123 (4%) Query: 125 DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP- 183 D + V + + + ++I + L + G V + P+ Sbjct: 326 DGSPVGNMTSAEVDANGFVRASFDTGVSRIIYQVPLVDLPNPNGMVSMDQQTYQPSPDSG 385 Query: 184 ----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 D + ++S + E+ MI + ++S +I ++ + E Sbjct: 386 SFFLWDAGDGPTGDIVAFARQESATDVARELTDMIQTQRAYSSNAKVIQTVDEMLQETTN 445 Query: 240 NIA 242 I Sbjct: 446 IIR 448 >gi|330943210|gb|EGH45617.1| flagellar basal body rod protein FlgG [Pseudomonas syringae pv. pisi str. 1704B] Length = 133 Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 12/131 (9%), Positives = 38/131 (29%), Gaps = 5/131 (3%) Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 + P + + + + ++I + G + Sbjct: 3 NGYALEPAIVVPQNAQTFTVGQDGTVSVTLAGATATPQIIGNIQTADFINPAGLQAMGGN 62 Query: 176 GISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + + + LE+SN +++ E+ MI + + + +I Sbjct: 63 LYLETGSSGAPQIGTPGLNGLGPTLQNTLENSNVSTVEELVNMITTQRAYEMNSKVISTA 122 Query: 231 EKSMLEAIRNI 241 ++ + +N+ Sbjct: 123 DQMLQNLTQNL 133 >gi|22127327|ref|NP_670750.1| flagellar hook protein FlgE [Yersinia pestis KIM 10] gi|45442796|ref|NP_994335.1| flagellar hook protein FlgE [Yersinia pestis biovar Microtus str. 91001] gi|108809055|ref|YP_652971.1| flagellar hook protein FlgE [Yersinia pestis Antiqua] gi|108810748|ref|YP_646515.1| flagellar hook protein FlgE [Yersinia pestis Nepal516] gi|145597817|ref|YP_001161893.1| flagellar hook protein FlgE [Yersinia pestis Pestoides F] gi|150260249|ref|ZP_01916977.1| lateral flagellar hook protein [Yersinia pestis CA88-4125] gi|162421081|ref|YP_001604847.1| flagellar hook protein FlgE [Yersinia pestis Angola] gi|165924960|ref|ZP_02220792.1| flagellar hook protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165939066|ref|ZP_02227618.1| flagellar hook protein [Yersinia pestis biovar Orientalis str. IP275] gi|166008888|ref|ZP_02229786.1| flagellar hook protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166211930|ref|ZP_02237965.1| flagellar hook protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167399572|ref|ZP_02305096.1| flagellar hook protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167419268|ref|ZP_02311021.1| flagellar hook protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425161|ref|ZP_02316914.1| flagellar hook protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167466340|ref|ZP_02331044.1| flagellar hook protein [Yersinia pestis FV-1] gi|218927912|ref|YP_002345787.1| flagellar hook protein FlgE [Yersinia pestis CO92] gi|229837408|ref|ZP_04457571.1| Flagellar hook protein flgE [Yersinia pestis Pestoides A] gi|229840621|ref|ZP_04460780.1| Flagellar hook protein flgE [Yersinia pestis biovar Orientalis str. PEXU2] gi|229842828|ref|ZP_04462980.1| Flagellar hook protein flgE [Yersinia pestis biovar Orientalis str. India 195] gi|229900945|ref|ZP_04516069.1| Flagellar hook protein flgE [Yersinia pestis Nepal516] gi|270487673|ref|ZP_06204747.1| flagellar hook protein FlgE [Yersinia pestis KIM D27] gi|294502788|ref|YP_003566850.1| flagellar hook protein [Yersinia pestis Z176003] gi|21960408|gb|AAM87001.1|AE013948_9 putative flagellar hook protein [Yersinia pestis KIM 10] gi|45437662|gb|AAS63212.1| flagellar hook protein FlgE [Yersinia pestis biovar Microtus str. 91001] gi|108774396|gb|ABG16915.1| flagellar hook protein [Yersinia pestis Nepal516] gi|108780968|gb|ABG15026.1| putative flagellar hook protein [Yersinia pestis Antiqua] gi|115346523|emb|CAL19399.1| putative flagellar hook protein [Yersinia pestis CO92] gi|145209513|gb|ABP38920.1| flagellar hook protein [Yersinia pestis Pestoides F] gi|149289657|gb|EDM39734.1| lateral flagellar hook protein [Yersinia pestis CA88-4125] gi|162353896|gb|ABX87844.1| flagellar hook protein [Yersinia pestis Angola] gi|165913022|gb|EDR31647.1| flagellar hook protein [Yersinia pestis biovar Orientalis str. IP275] gi|165923160|gb|EDR40311.1| flagellar hook protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165992227|gb|EDR44528.1| flagellar hook protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166206676|gb|EDR51156.1| flagellar hook protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166963262|gb|EDR59283.1| flagellar hook protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167052076|gb|EDR63484.1| flagellar hook protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167055924|gb|EDR65705.1| flagellar hook protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229682284|gb|EEO78376.1| Flagellar hook protein flgE [Yersinia pestis Nepal516] gi|229690095|gb|EEO82152.1| Flagellar hook protein flgE [Yersinia pestis biovar Orientalis str. India 195] gi|229696987|gb|EEO87034.1| Flagellar hook protein flgE [Yersinia pestis biovar Orientalis str. PEXU2] gi|229705531|gb|EEO91541.1| Flagellar hook protein flgE [Yersinia pestis Pestoides A] gi|262360820|gb|ACY57541.1| flagellar hook protein [Yersinia pestis D106004] gi|270336177|gb|EFA46954.1| flagellar hook protein FlgE [Yersinia pestis KIM D27] gi|294353247|gb|ADE63588.1| flagellar hook protein [Yersinia pestis Z176003] gi|320016711|gb|ADW00283.1| Flagellar hook protein flgE [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 413 Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 36/132 (27%), Positives = 57/132 (43%), Gaps = 6/132 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SF+I A A ++L+T+++N++N+ T GF+ + +FS + Q + SG Sbjct: 2 SFSIANTALNAHTEQLNTISNNIANSATKGFKASRTEFSSMYAQS-----QPLGVAVSGV 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122 + G TG LD A+ G +F + TR G F+ DG LV+ G Sbjct: 57 SQNISKDGQKEKTGMGLDLAISGGGFFVVRESSGDKAYTRAGMFRSDVDGYLVNGQGMKL 116 Query: 123 VLDMASVPIQIP 134 A I Sbjct: 117 QGYPADAAGNIQ 128 Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 22/140 (15%), Positives = 48/140 (34%), Gaps = 9/140 (6%) Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 G + + +I ++ GE +GKV+ L + Sbjct: 278 TQLSQGFTTTRNKSDGYTSGVKNAERIESDGSVYATFSNGERVLQGKVV----LANFASP 333 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFN 221 G V + + S + + T ++ G LE+SN + E+ ++ + + Sbjct: 334 SGLVTQNGTSWSESNKSGAALLGTPGTGLLGSLESGALENSNVDITAELVGLMTAQRNYQ 393 Query: 222 SITTLIDENEKSMLEAIRNI 241 + T +I N+ M + + Sbjct: 394 ASTKIISTNDSMMNALFQVL 413 >gi|308186393|ref|YP_003930524.1| Flagellar hook protein FlgE [Pantoea vagans C9-1] gi|308056903|gb|ADO09075.1| Flagellar hook protein FlgE [Pantoea vagans C9-1] Length = 418 Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 16/125 (12%), Positives = 39/125 (31%), Gaps = 5/125 (4%) Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 P D + +QK +++ + L S +G + ++ Sbjct: 292 GSPTQDGYAPGDLTSYAINDDGTITGSYSNQKTQLLGQIVLSSFSNPEGLESKGDNVWQA 351 Query: 180 NIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 + + ++ G LE SN + E+ MI + + + I ++ + Sbjct: 352 SSASGQAAIGLANTGTFGSLTAGALESSNVDMSKELVNMIVAQRNYQANAQTIKTQDQIL 411 Query: 235 LEAIR 239 + Sbjct: 412 NTLVN 416 Score = 76.8 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 36/195 (18%), Positives = 75/195 (38%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SF+ ++ A L + +N++N+ T GF++ + F+++ + K++ V Sbjct: 2 SFSQAVSGLGAASSNLDVIGNNIANSATAGFKSSTIAFADMFAGSNVGLGTKVAAV---- 57 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122 + G+ +T LD AL G+ +F + G+ +R+G+ + + +LV+ G Sbjct: 58 -IQNFNDGATTTTSRGLDVALSGNGFFRMTDSSGGVFYSRNGQLTLDANRNLVNTQGLNV 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 AS Q + + T GL + S + + N Sbjct: 117 TGYPASGSPATIQAGANPVALKIPTTQMSARATTTAGLVANLNSTDTTPTVTTFSTANAD 176 Query: 183 PTPLEDLSGVTVKRG 197 + + V +G Sbjct: 177 SYNKKTTATVFDSQG 191 >gi|238751762|ref|ZP_04613250.1| Flagellar hook protein FlgE [Yersinia rohdei ATCC 43380] gi|238710033|gb|EEQ02263.1| Flagellar hook protein FlgE [Yersinia rohdei ATCC 43380] Length = 430 Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 13/98 (13%), Positives = 33/98 (33%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLED 201 +Q+ +++ + + + +G ++ T+ G LE Sbjct: 331 YSNQQTQLLGQIVMVNFANPEGLSSAGDNVWKETQTSGSPILGIAGSGGFGTLTSGALES 390 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ MI + + S I ++ + + Sbjct: 391 SNVDLSAELVNMIVAQRNYQSNAQTIKTQDQILQTLVN 428 Score = 75.7 bits (184), Expect = 6e-12, Method: Composition-based stats. Identities = 25/117 (21%), Positives = 53/117 (45%), Gaps = 6/117 (5%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 F+ ++ A L + +N++N+ T GF++ V F+++ Q V Sbjct: 2 GFSQAVSGLNAASSNLDVIGNNIANSATSGFKSSSVSFADMFA-----GSQAGMGVQVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 G+ +T LD A+ +F ++ GI R+G+FK+ ++ ++++ G Sbjct: 57 ITQDFNDGTATTTNRRLDIAISQSGFFRMQDSTGGIYYARNGQFKLDENRNIINMQG 113 >gi|134283656|ref|ZP_01770355.1| flagellar basal body protein FlaE [Burkholderia pseudomallei 305] gi|134245065|gb|EBA45160.1| flagellar basal body protein FlaE [Burkholderia pseudomallei 305] Length = 404 Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 30/197 (15%), Positives = 61/197 (30%), Gaps = 6/197 (3%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVASGKEYLSKE 69 L + +N++N +TVGF+ +FS++ + Sbjct: 1 MAGASSDLDVIGNNIANANTVGFKGSTAQFSDMYANSVASAVNNPIGIGTMLASVQQQFS 60 Query: 70 VGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASV 129 G+ S+ + L+ A+ G+ +F + + +RDG F+ +G +V++ G + A+ Sbjct: 61 QGTITSSTSSLNVAINGNGFFQMSNNGVTTYSRDGTFQRDKNGYIVNSQGLNLMGYAANA 120 Query: 130 PIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL 189 I + I+ T + P Sbjct: 121 NGVINTAATVPLQAPTTNIAPTATTKITGQFNLNSQDAVPATTPFNYTDPTSYNYTTSVQ 180 Query: 190 SGVTVKRGFLEDSNANS 206 T+ N N Sbjct: 181 VFDTLGGSQ----NVNL 193 Score = 64.1 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 12/98 (12%), Positives = 34/98 (34%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLED 201 + + + + L + + G V N+ + + + T++ LE+ Sbjct: 306 YSNGQTSTLGQIVLANFNNPNGLVNVGNNQYVESAASGVPQISAPGSTNHGTLQGSALEN 365 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + ++ ++I + + + I + I Sbjct: 366 SNVDLTSQLVKLITAQRNYQANAQTIKTQQTVDQTLIN 403 >gi|24051371|gb|AAN42702.1| flagellar hook protein FlgE [Shigella flexneri 2a str. 301] Length = 642 Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 31/195 (15%), Positives = 70/195 (35%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 242 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 296 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ +L++ G Sbjct: 297 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLLNTQGLQL 356 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + Q+ K T + S + + N Sbjct: 357 TGYPVTGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNAD 416 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 417 SYNKKGSVTVFDSQG 431 Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 21/173 (12%), Positives = 55/173 (31%), Gaps = 6/173 (3%) Query: 72 SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPI 131 F + GT +D A+ + + T F + + + + + Sbjct: 469 EFNANGTLVDGAMANNIATGAINGAEPA-TFSLSFLNSMQQNTGANNIVATTQNGYKPGD 527 Query: 132 QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PL 186 + + +++ +++ + L + ++G ++ S Sbjct: 528 LVSYQINDDGTVVGNNSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTA 587 Query: 187 EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + T+ G LE SN + E+ MI + + S I ++ + + Sbjct: 588 GTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYKSNAQTIKTQDQILNTRVN 640 >gi|260597445|ref|YP_003210016.1| flagellar hook protein FlgE [Cronobacter turicensis z3032] gi|260216622|emb|CBA29917.1| Flagellar hook protein flgE [Cronobacter turicensis z3032] Length = 410 Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 69/172 (40%), Gaps = 6/172 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ V F+++ K + K++ + Sbjct: 2 AFSQAVSGLNAASTNLDVIGNNIANSATYGFKSGSVSFADMFAGSKAGLGVKVAGI---- 57 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G +TG +LD A+ + +F L+S G+ +R+G+FK+ + +LV+ G Sbjct: 58 -TQDFGDGVTTNTGRKLDVAISQNGFFRLLDSNGGVFYSRNGQFKLDEKSNLVNMQGMQV 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174 A+ Q+ + S V + Sbjct: 117 TGYPATGTPPTVQQGADPIPLTIPTAQMPASQTTSANFVMNLNSSDDVPAQT 168 Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 24/198 (12%), Positives = 58/198 (29%), Gaps = 10/198 (5%) Query: 51 DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTD 110 ++D +S S + + A G + + F + Sbjct: 212 NMDTSVSSATPTTPLTSLTFSDSGALTGITNAAPAGSQQVPISVTSLNG-SAAFSFSMNL 270 Query: 111 DGSLVSASGKYPVLDMAS----VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 G+ SG +L + + ++K +++ + L + Sbjct: 271 TGTTQQNSGANVLLTSNQNGYKPGDLVGYQVNEDGSLVGNYSNEKSQLLGQIVLANFANP 330 Query: 167 QGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221 +G + ++ S + + + G LE SN + E+ MI + + Sbjct: 331 EGLSSQGDNVWSASTASGVALLGSAGTGNFGKLTSGALEASNVDLSKELVNMIVAQRNYQ 390 Query: 222 SITTLIDENEKSMLEAIR 239 S I ++ + + Sbjct: 391 SNAQTIKTQDQILNTLVN 408 >gi|146341930|ref|YP_001206978.1| putative flagellar hook protein flgE [Bradyrhizobium sp. ORS278] gi|146194736|emb|CAL78761.1| putative Flagellar hook protein flgE [Bradyrhizobium sp. ORS278] Length = 601 Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 26/132 (19%), Positives = 56/132 (42%), Gaps = 11/132 (8%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + N ++ A L ++ N++N TVG++ I F +++ N Q V + Sbjct: 6 AMNTSVSGLSAQSFALQNISGNIANASTVGYKGIGTSFEDLIPNATNPTRQNAGGVTAFA 65 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRG-----------IILTRDGRFKVTDDG 112 + G+ ++ + A+ GD +F ++ TR G F++ +G Sbjct: 66 KATITTQGTVSTSSVATNMAINGDGFFNVQKATSVVDNVPVFTGVTNYTRRGDFQLNANG 125 Query: 113 SLVSASGKYPVL 124 +L++ +G Y + Sbjct: 126 NLINGAGYYLMG 137 Score = 68.7 bits (166), Expect = 6e-10, Method: Composition-based stats. Identities = 12/92 (13%), Positives = 31/92 (33%) Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEM 210 + +A + L + + + + + G LE SN + E Sbjct: 510 QTINLAQVTLSHFNGTNYLKALDGGAYEATDQSGQAIIGASGKISGGSLEGSNTDIADEF 569 Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 ++I Q +++ T +I + + + + Sbjct: 570 TKLIVTQQAYSANTKVITTANSMVQDLLNVLR 601 >gi|306841276|ref|ZP_07473987.1| flagellar hook protein FlgE [Brucella sp. BO2] gi|306288678|gb|EFM60009.1| flagellar hook protein FlgE [Brucella sp. BO2] Length = 383 Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 37/112 (33%), Positives = 57/112 (50%), Gaps = 2/112 (1%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 A RLSTVADN++N TVG++ + +FS +V S V + Y + G Sbjct: 1 MNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAGQYNSGS-VLTDVRYGISDQG 59 Query: 72 SFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASGKYP 122 ST + D A++G+ +F ++ P G TR G F +G LV+++G Y Sbjct: 60 GIRSTSSTTDLAIDGNGYFVVQGPGGSTYLTRAGSFVPDKNGDLVNSAGYYL 111 Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats. Identities = 10/54 (18%), Positives = 22/54 (40%) Query: 186 LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + + G LE+SNA+ E+ MI + + + + + + M + Sbjct: 327 PQGDGMGKIMSGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGSELMDVLVN 380 >gi|254502675|ref|ZP_05114826.1| conserved domain protein [Labrenzia alexandrii DFL-11] gi|222438746|gb|EEE45425.1| conserved domain protein [Labrenzia alexandrii DFL-11] Length = 477 Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 44/223 (19%), Positives = 76/223 (34%), Gaps = 25/223 (11%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN-DIDQKISFVASG 62 + N ++ A L ++ N++N+ TVGF+ + FS++V + DQ + Sbjct: 6 AINSAVSGLSAQATALENISGNVANSQTVGFKRLDTTFSDLVSGGGSTQADQVSGTTYAT 65 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWF-----------ALESPRGIILTRDGRFKVTDD 111 + G S + A+ G+ +F + TR G F+V + Sbjct: 66 SRATNTIGGDISSNDVDTYMAINGEGYFVVTQAADFVDGSTTFADDTFYTRAGDFEVNKE 125 Query: 112 GSLVSASG------------KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG 159 G V+ SG PV D SV Q + + +V AT Sbjct: 126 GYFVNQSGYYLKGFPLDPATGNPVGDNPSVIQINSQPLAASSTTTVNYQASLPRVPATTN 185 Query: 160 LYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDS 202 + + +G +P E T++ FL S Sbjct: 186 YDPNTANSELLNDGANG-APGPNLGATEIGDTGTLEADFLASS 227 Score = 67.6 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 14/96 (14%), Positives = 38/96 (39%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANS 206 + + + + + L + Q R + + + + G V LE SNA+ Sbjct: 382 YSNNQTRALYEIPLATFQAEQSLRRVDGAAFAATSDSGDADLSGGGAVISNALELSNADI 441 Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 E ++I Q +++ + ++ ++ + A+ + Sbjct: 442 ADEFSKLIITQQAYSANSRIVTSADEMLDSALNMVR 477 >gi|254445148|ref|ZP_05058624.1| conserved domain protein [Verrucomicrobiae bacterium DG1235] gi|198259456|gb|EDY83764.1| conserved domain protein [Verrucomicrobiae bacterium DG1235] Length = 510 Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 33/177 (18%), Positives = 62/177 (35%), Gaps = 17/177 (9%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN------------- 50 + + G++A + + + + +N++N +TV F++ ++K+SE + Sbjct: 5 ALSSGISALNSFSKGMEVIGNNIANVNTVSFKSSRIKYSETFNQVLKQSAPSPSSGDRSN 64 Query: 51 -DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG---IILTRDGRF 106 Q V G ST D A+ G+ +F +E P+ TR G F Sbjct: 65 VQASQVGLGVQVEGIVGQFHQGGLSSTNQLTDLAISGEGFFLVEDPKNATSQFATRGGDF 124 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 ++ D G LV++ G E + IA + Sbjct: 125 RIDDRGFLVTSGGMRVQGLTGGSIGFEVDVGEDGKWQFVPNEDTQNGTIAPESYGDI 181 Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 11/51 (21%), Positives = 24/51 (47%) Query: 189 LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 ++++G LE SN + E MI + F + + +I ++ + E + Sbjct: 457 NGLGSIQQGALELSNVDLTNEFANMITTQRGFQAGSRIITVSDDILQEVVN 507 >gi|242238969|ref|YP_002987150.1| flagellar hook protein FlgE [Dickeya dadantii Ech703] gi|242131026|gb|ACS85328.1| flagellar basal body FlaE domain protein [Dickeya dadantii Ech703] Length = 399 Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 27/130 (20%), Positives = 54/130 (41%), Gaps = 6/130 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 F+ ++ A L + +N++N++T GF++ V F+++ + V Sbjct: 2 GFSQAVSGLNAASSNLDVIGNNIANSETTGFKSASVSFADIYADSAVGL-----GVKVAS 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122 + G+ ST D A+ +F + + TR+G F + D +LV+ +G Y Sbjct: 57 VTQNFTDGTVESTDVGTDVAISKTGFFRVTDDSGSVYYTRNGEFTLDSDRNLVTKTGYYV 116 Query: 123 VLDMASVPIQ 132 A+ Sbjct: 117 TGYAATGTPP 126 Score = 76.1 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 17/125 (13%), Positives = 36/125 (28%), Gaps = 5/125 (4%) Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 D + + + +++ + L S QG + ++ S Sbjct: 273 NTKSQDGYTAGSLTSYTINDDGTITGTYSNSQTQLLGQIVLASFSNPQGLSSQGDNVWSE 332 Query: 180 NIPPTPLEDLS-----GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 + T+ G LE SN + E+ MI + + S I + + Sbjct: 333 TSASGQALLGTAGTGVFGTLTSGALESSNVDISQELVNMIVAQRNYQSNAQTIKTQDAIL 392 Query: 235 LEAIR 239 + Sbjct: 393 NTLVN 397 >gi|83955135|ref|ZP_00963791.1| putative flagellar hook protein [Sulfitobacter sp. NAS-14.1] gi|83840464|gb|EAP79637.1| putative flagellar hook protein [Sulfitobacter sp. NAS-14.1] Length = 433 Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 29/82 (35%), Gaps = 5/82 (6%) Query: 163 VDMSQGFVRRENSGISPNI-----PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217 V G V + + + + ++ G LE SN + EM +I Sbjct: 349 VANPNGLVEVKGNAYRLSGETGSFSALQANSSTVGSINAGALEGSNVDIAQEMTDLIKAQ 408 Query: 218 QKFNSITTLIDENEKSMLEAIR 239 + F++ +I + M E R Sbjct: 409 RAFSTNAKVITTVDDMMDETTR 430 Score = 71.1 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 32/138 (23%), Positives = 64/138 (46%), Gaps = 10/138 (7%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-DQKISFVAS 61 ++ G++ A + + ++++N++N++TVG+R F+ +V + + V + Sbjct: 5 SALQTGVSGLRANSKAVGSISENIANSNTVGYRRG---FAHMVTTTASGGNGDGVLSVNA 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI------ILTRDGRFKVTDDGSLV 115 +E G IST + D A+ G+ +FA+ +LTR G F + G+L Sbjct: 62 VEELDISTAGGLISTNSSTDLAIGGNGFFAVSMNPNETVQTNYMLTRAGSFLPDEQGNLK 121 Query: 116 SASGKYPVLDMASVPIQI 133 +A+G Y + I Sbjct: 122 NAAGYYLAGYPYGLEGDI 139 >gi|83944165|ref|ZP_00956621.1| putative flagellar hook protein [Sulfitobacter sp. EE-36] gi|83845032|gb|EAP82913.1| putative flagellar hook protein [Sulfitobacter sp. EE-36] Length = 433 Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 29/82 (35%), Gaps = 5/82 (6%) Query: 163 VDMSQGFVRRENSGISPNI-----PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217 V G V + + + + ++ G LE SN + EM +I Sbjct: 349 VANPNGLVEVKGNAYRLSGETGSFSALQANSSTVGSINAGALEGSNVDIAQEMTDLIKAQ 408 Query: 218 QKFNSITTLIDENEKSMLEAIR 239 + F++ +I + M E R Sbjct: 409 RAFSTNAKVITTVDDMMDETTR 430 Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 32/138 (23%), Positives = 64/138 (46%), Gaps = 10/138 (7%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-DQKISFVAS 61 ++ G++ A + + ++++N++N++TVG+R F+ +V + + V + Sbjct: 5 SALQTGVSGLRANSKAVGSISENIANSNTVGYRRG---FAHMVTTTASGGNGDGVLSVNA 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI------ILTRDGRFKVTDDGSLV 115 +E G IST + D A+ G+ +FA+ +LTR G F + G+L Sbjct: 62 VEELDIATAGGLISTNSSTDLAIGGNGFFAVSMNPNETVQTNYMLTRAGSFLPDEQGNLK 121 Query: 116 SASGKYPVLDMASVPIQI 133 +A+G Y + I Sbjct: 122 NAAGYYLAGYPYGLEGDI 139 >gi|37525841|ref|NP_929185.1| flagellar hook protein FlgE [Photorhabdus luminescens subsp. laumondii TTO1] gi|36785270|emb|CAE14211.1| Flagellar hook protein FlgE [Photorhabdus luminescens subsp. laumondii TTO1] Length = 404 Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 35/192 (18%), Positives = 73/192 (38%), Gaps = 8/192 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N T GF++ V FS++ + + K+S V Sbjct: 2 AFSQAVSGLNAAAGNLDVIGNNIANAATYGFKSSTVAFSDIFAGSQVGLGVKVSGVN--- 58 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122 + + G+ +T LD A+ +F ++ GI +R+G+FK+ ++ ++++ G Sbjct: 59 --QNFKDGTPTTTNRTLDLAITQGGFFRMQGGDGGIYYSRNGQFKMDENRNIINMQG--M 114 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 L EI I+ ++ V M+ P Sbjct: 115 KLTGYPAASVNGGAPEIQKGANPEPITIPQGILMAKATTKVTMTANLNSMHKKPTEAFSP 174 Query: 183 PTPLEDLSGVTV 194 +V Sbjct: 175 ENNDSYNYPTSV 186 Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 16/129 (12%), Positives = 41/129 (31%), Gaps = 5/129 (3%) Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 + S P D + + E +++ +++ + L + +G + ++ Sbjct: 274 TDSISAPKQDGYAAGEFKGYRIEQDGRVIGTYTNEQSQLLGQIVLTNFANPEGLAAKGDN 333 Query: 176 GISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + + G LE SN + E+ MI + + S I Sbjct: 334 VWVETSASGNPVVGIADSGGFGKLLSGSLEASNVDMSQELVNMIVAQRNYQSSAQTIKTQ 393 Query: 231 EKSMLEAIR 239 ++ + + Sbjct: 394 DQILQTLVS 402 >gi|157373207|ref|YP_001471807.1| flagellar hook protein FlgE [Shewanella sediminis HAW-EB3] gi|157315581|gb|ABV34679.1| flagellar basal body FlaE [Shewanella sediminis HAW-EB3] Length = 398 Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 47/193 (24%), Positives = 75/193 (38%), Gaps = 10/193 (5%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SFNI L+ A Q L+T+++N++N+ TVG+R + +FS V + Q Sbjct: 2 SFNIALSGLQATTQDLNTISNNIANSSTVGYRGGRSEFSAVY-----NGGQAGGVNVMST 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASGKYP 122 GS + TG ELD ++GD +F L + +R G F DG + +G Sbjct: 57 SQNFSMGGSLVYTGRELDMGIQGDGFFVLSGQDGSTLYSRAGMFSQDADGYITDPAGNRL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 Q+ + + G + K AT + V + + +P P Sbjct: 117 QGYPVGAGGQLQTGNVSDLQVQSGSLPAK----ATTDVGVVSNLDASMEPIDQTTTPFDP 172 Query: 183 PTPLEDLSGVTVK 195 S TV Sbjct: 173 DDISSYHSSGTVA 185 Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 22/161 (13%), Positives = 52/161 (32%), Gaps = 12/161 (7%) Query: 86 GDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEK 145 G A + ++ S ++ +G +++ ++ Sbjct: 245 GTPGGAAPMSLDLSYKNSTQYASDYSNSSLTQNGYT---SGELNGVRLDDNGMVYGTYTN 301 Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLE 200 G+ +G+V+ L + G N+ + + +V G+LE Sbjct: 302 GQEQIQGQVV----LADFNNPNGLTPVSNNAWAATNAAGQPIVGAPTTGTLGSVSGGYLE 357 Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 SN ++ EM ++ + + S ++D N + I Sbjct: 358 GSNVDTTAEMVSLMTAQRNYQSNAKVLDANSTMQQALLNAI 398 >gi|119385423|ref|YP_916479.1| hypothetical protein Pden_2696 [Paracoccus denitrificans PD1222] gi|119375190|gb|ABL70783.1| protein of unknown function DUF1078 domain protein [Paracoccus denitrificans PD1222] Length = 446 Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 67/165 (40%), Gaps = 11/165 (6%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-QKISFVAS 61 ++ + G++ A RL+T++DN++N+ T G++ + F +V + V + Sbjct: 5 SALSAGVSGLAANSTRLATISDNIANSGTYGYKRVDTSFESMVINQGRGGGLYTANGVRA 64 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALES----------PRGIILTRDGRFKVTDD 111 + E G+ + T LD A+ G + +++TR G F+ D Sbjct: 65 ATSRIVDERGNLVPTSHPLDIAISGRGMLPVIYSASLDSGTATSSDLVMTRTGSFRTDDQ 124 Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156 G L + SG + A+ IP + G + + + A Sbjct: 125 GYLRTDSGLVLMGWPANSDGTIPSQPRDSTTGLQPIMISPSQTAA 169 Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 29/98 (29%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGI-----SPNIPPTPLEDLSGVTVKRGFLED 201 + + + + L V G + +N S D V E Sbjct: 346 YDTGFTRTLYQVPLVDVPNPNGLIAMDNQTYKISPRSGAFYLWNAGDGPTGAVAGYAREA 405 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S + E+ +I + + S +I ++ + E Sbjct: 406 STTDVAAELTDLIQTQRAYTSNAKVIQTVDEMLQETAN 443 >gi|271500066|ref|YP_003333091.1| fagellar hook-basal body protein [Dickeya dadantii Ech586] gi|270343621|gb|ACZ76386.1| fagellar hook-basal body protein [Dickeya dadantii Ech586] Length = 399 Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 34/192 (17%), Positives = 77/192 (40%), Gaps = 6/192 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SF+ ++ A L + +N++N+ TVGF+ + F+++ + K++ V Sbjct: 2 SFSQAVSGLNAASSNLDVIGNNIANSATVGFKASNISFADMYAGSNVGLGTKVASV---- 57 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 GS +T LD A+ G+ ++ L++ ++ +R+G+F + ++V++ G Sbjct: 58 -LQDFGNGSINNTSRALDVAINGNGFYRLLDTNGSVVYSRNGQFTLDSSRNIVNSQGLQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q+ E + K +T + + S N+ N Sbjct: 117 TGYPATGTPPTIQQGASPVALSIPETTMSAKATSTASIIANLNSSDSTNTWNATDPTNTS 176 Query: 183 PTPLEDLSGVTV 194 + ++ Sbjct: 177 NYKGSITTYDSL 188 Score = 73.4 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 27/224 (12%), Positives = 59/224 (26%), Gaps = 14/224 (6%) Query: 30 DTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAW 89 +T ++ + + A + + S Y S + Sbjct: 174 NTSNYKGSITTYDSLGNAHNFGLYFVKTAANSWDVYAQDTSISGAGFQGPTTLSFNSSGA 233 Query: 90 FALESPRGIIL---------TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF 140 +P I + T F T + S S K P D + Sbjct: 234 LTTTTPATISMATLNGSAASTFTLAFTGTVQQNSGSNSTKTPTQDGYAPGELTGYSISDD 293 Query: 141 NVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVK 195 + K +V+ + L + +G + ++ + + + Sbjct: 294 GTVVGSYSNSKTQVLGQIALANFANPEGLSPQGDNVWAATSNSGQAVVGLAGSGNLGKLV 353 Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E SN + E+ MI + + S I ++ + + Sbjct: 354 GKATESSNVDMSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 397 >gi|237751360|ref|ZP_04581840.1| flagellar hook protein FlgE [Helicobacter bilis ATCC 43879] gi|229372726|gb|EEO23117.1| flagellar hook protein FlgE [Helicobacter bilis ATCC 43879] Length = 600 Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 23/150 (15%), Positives = 53/150 (35%), Gaps = 22/150 (14%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-------D 53 M + ++ + L ++++N++N +TVG++ +F + + + + Sbjct: 1 MNDTMLNAVSGIKTHQFGLDSISNNIANVNTVGYKANDPEFKTLFSRSMDSMNASTVTNN 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF---------------ALESPRGI 98 V + ++G+ ++ A G WF + Sbjct: 61 DFSYGVTGASNNVITKMGNLKKADSDTSVAYTGKGWFVVGKNKEGQFEIGEDNFDVSDEN 120 Query: 99 ILTRDGRFKVTDDGSLVSASGKYPVLDMAS 128 T++G F + DG LV++ G Y Sbjct: 121 YFTKNGDFTIDSDGYLVNSEGYYLYGVNLG 150 Score = 74.9 bits (182), Expect = 8e-12, Method: Composition-based stats. Identities = 22/166 (13%), Positives = 48/166 (28%), Gaps = 22/166 (13%) Query: 90 FALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEIS 149 F + + L+R D G D + + + + Sbjct: 437 FLGKKSVKLTLSRSTNKVYKDSGV------NDTEQDGKNRGEMSNIRINNEGIISVAFTN 490 Query: 150 QKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS----------------GVT 193 + + I +GL QG + + + N E Sbjct: 491 GQTEAIGRVGLAMFANDQGLKKVGGNLFALNPSTINGEVTQLSGNPKLVWGEDSNLKQGK 550 Query: 194 VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 V +G++E SN + + +I + + ++ ++ + EAI Sbjct: 551 VLQGYVETSNVDVADALTNLILMQRGYSMNAKAFTTSDDLIKEAIN 596 >gi|33596140|ref|NP_883783.1| flagellar hook protein FlgE [Bordetella parapertussis 12822] gi|33573143|emb|CAE36790.1| flagellar hook protein FlgE [Bordetella parapertussis] Length = 473 Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 36/168 (21%), Positives = 60/168 (35%), Gaps = 8/168 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 F GL+ A Q L + +N++N+ TVGF++ F++V + + V Sbjct: 2 GFGQGLSGLNAASQNLDVIGNNIANSGTVGFKSGAASFADVYAS-----SRVGLGVKVSA 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRG--IILTRDGRFKVTDDGSLVSASGKY 121 VG+ +TG E D A++G F + + + +R+G F V + +V+A G Sbjct: 57 INQRFTVGNISTTGGEYDMAIDGGKGFFRLTDQSGGVFYSRNGEFMVDKNFYIVNAQGFR 116 Query: 122 PVL-DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 V Q S G V Sbjct: 117 LTGYPAGGVGAQPVDLQLPQGNIAPQATSTAGLQTNLNANAKVIDPND 164 Score = 75.3 bits (183), Expect = 7e-12, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 32/98 (32%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLED 201 + + + I T+ L + + QG N+ T + LE Sbjct: 374 YTNGETQTIGTLVLANFNNVQGLQPVGNNAWVETSESGQATLGQPGTNGLATIAGQALEA 433 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ MI + + + I ++ M + Sbjct: 434 SNVDMSRELVNMIVAQRTYQANAQTIKTQDEVMQVLMN 471 >gi|300312833|ref|YP_003776925.1| flagellar hook protein [Herbaspirillum seropedicae SmR1] gi|300075618|gb|ADJ65017.1| flagellar hook protein [Herbaspirillum seropedicae SmR1] Length = 420 Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 31/129 (24%), Positives = 56/129 (43%), Gaps = 5/129 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID--QKISFVAS 61 SF GL+ + L + +N++N TVGF+ +V+F++ N V Sbjct: 2 SFQQGLSGLHGASKHLDVIGNNVANASTVGFKQGQVQFADAYANSMNRSGNSPVGIGVTV 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALE---SPRGIILTRDGRFKVTDDGSLVSAS 118 + G+ +T LD A+ GD +F + + + R+G+F++ DG L++ S Sbjct: 62 ANVSQAFTQGNIATTNNALDVAINGDGFFRMAASLTDQSPRYGRNGQFQLNKDGYLINPS 121 Query: 119 GKYPVLDMA 127 L Sbjct: 122 MNGAYLTGY 130 Score = 69.5 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 13/123 (10%), Positives = 34/123 (27%), Gaps = 5/123 (4%) Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 D +Q+ +V+ + L + G N+ + Sbjct: 296 QSQDGMPPGTLSSFSIGKDGSIIGAYSNQQTRVMGQIVLVNFANPHGLQPIGNNLYQASE 355 Query: 182 PPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + ++ +E SN + E+ MI + + + + I + + Sbjct: 356 AAGSALVGTPTTGAFGALQGRAVEQSNVDLTAELVNMIVAQRVYQANSQTIKVQDTVLQT 415 Query: 237 AIR 239 + Sbjct: 416 LVS 418 >gi|217327976|ref|ZP_03444058.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. TW14588] gi|217318403|gb|EEC26829.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. TW14588] Length = 372 Score = 77.6 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 72/195 (36%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ + V+ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNQVNMQGLQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q+ K T + S + N+ + N Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPSVNAFDASNAD 176 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 177 SYNKKGSVTVFDSQG 191 >gi|315125984|ref|YP_004067987.1| flagellar hook protein FlgE [Pseudoalteromonas sp. SM9913] gi|315014498|gb|ADT67836.1| flagellar hook protein FlgE [Pseudoalteromonas sp. SM9913] Length = 442 Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 35/189 (18%), Positives = 75/189 (39%), Gaps = 8/189 (4%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + FNIGL+ + + L ++N++N+ T G++ +F+ V + Q+ + Sbjct: 1 MSMFNIGLSGLKSTQAGLEVTSNNIANSGTAGYKNNTAEFAAVY-----NGSQRGGVKVA 55 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 + G + TG LD A++G +FA+ T+ G+F++ +D ++V+A+G Sbjct: 56 NVKEDFVTGGEIVRTGNALDIAIDGQGFFAISENGRTAYTQAGQFQLDNDLNVVNANGGK 115 Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 S + D G ++ + I +++ + + P Sbjct: 116 LQGFGVSQ---VDGGDPTIVPGVLTDLKIEASNIEAQASTNINFNGNLSSSSDVIAYPTA 172 Query: 182 PPTPLEDLS 190 P Sbjct: 173 PAVFDPKDG 181 Score = 59.5 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 14/95 (14%), Positives = 29/95 (30%), Gaps = 5/95 (5%) Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLEDSNAN 205 + K+ + L S G + N+ E S + G SN + Sbjct: 347 ESKLQGQVVLASFANVDGLEQGSNTVWYQTEESGSALYGEPESGSLGKLLSGSFMGSNVD 406 Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 ++ ++ Q + + I ++ M N Sbjct: 407 ISEQLVGLMSFQQNYQANAKTISSADEMMQILFSN 441 >gi|307131609|ref|YP_003883625.1| flagellar hook protein flgE [Dickeya dadantii 3937] gi|306529138|gb|ADM99068.1| Flagellar hook protein flgE [Dickeya dadantii 3937] Length = 399 Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 35/192 (18%), Positives = 75/192 (39%), Gaps = 6/192 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SF+ ++ A L + +N++N+ TVGF+ + F+++ + +++ V Sbjct: 2 SFSQAVSGLNAASNNLDVIGNNIANSATVGFKASNISFADMYAGSNVGLGTRVASV---- 57 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 GS ST LD A+ G+ ++ L S ++ +R+G+F + ++V+A G Sbjct: 58 -LQDFSNGSITSTSRSLDVAINGNGFYRLLNSNGSVVYSRNGQFTLDSSRNIVNAQGLQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q+ E + K +T + + S + N Sbjct: 117 TGYPATGTPPAIQQGADPVGLSIPETTMSAKATSTASIIASLNSSDSTNTWDPTDPTNTS 176 Query: 183 PTPLEDLSGVTV 194 + ++ Sbjct: 177 NYKGSITTYDSL 188 Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 30/224 (13%), Positives = 61/224 (27%), Gaps = 14/224 (6%) Query: 30 DTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAW 89 +T ++ + + A + S S Y + + Sbjct: 174 NTSNYKGSITTYDSLGNAHNFALYFVKSASNSWDVYAQDTSITGAGFQGPTTLSFNTSGA 233 Query: 90 FALESPRGIIL---------TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF 140 +P I + T + F T + S S K P D Sbjct: 234 LTTTTPATISMATLNGSAASTFNLSFTGTVQQNSGSNSTKTPTQDGYEPGELTGYSISED 293 Query: 141 NVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFL- 199 + K +++ + L + +G + ++ + S T G L Sbjct: 294 GSVVGSYSNNKTQLLGQIALANFANPEGLSPQGDNVWAATGNSGQAVVGSAGTGNLGKLV 353 Query: 200 ----EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E SN + E+ MI + + S I ++ + + Sbjct: 354 GKATESSNVDMSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 397 >gi|222147589|ref|YP_002548546.1| flagellar hook protein FlgE [Agrobacterium vitis S4] gi|221734577|gb|ACM35540.1| flagellar hook protein [Agrobacterium vitis S4] Length = 418 Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 37/125 (29%), Positives = 63/125 (50%), Gaps = 1/125 (0%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 S N ++ A +LSTV DN++N+DT G++ + FS +V V + Sbjct: 6 SMNTAVSGLQAQASKLSTVGDNVANSDTTGYKRVSTAFSSLVVGSSGSGTYNSGGVQTTT 65 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122 E GS+ S+ +E D A++GD +F ++ + LTR G FK D+G +V+++G Sbjct: 66 VNSISEEGSYQSSTSETDLAIKGDGYFVVQDEAGSVFLTRAGDFKADDNGYMVNSAGYTL 125 Query: 123 VLDMA 127 + Sbjct: 126 LGYSY 130 Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 15/139 (10%), Positives = 34/139 (24%), Gaps = 5/139 (3%) Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 ++ L SA+ +D + + L +V Sbjct: 277 VDMSTMTQLNSANSSEGDVDGNGASAASSVTVNSSGNIVATYQDGSTANLYKVALATVAS 336 Query: 166 SQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 + S ++ LE SN + E+ MI + + Sbjct: 337 PDNMKSVNGTAYQVTADAGTVVVGFANTGSFGSINSKTLETSNVDLATELTNMIQSQRSY 396 Query: 221 NSITTLIDENEKSMLEAIR 239 ++ + + + I Sbjct: 397 SANSKVFQTAADMLDTLIS 415 >gi|261341494|ref|ZP_05969352.1| flagellar hook protein FlgE [Enterobacter cancerogenus ATCC 35316] gi|288316290|gb|EFC55228.1| flagellar hook protein FlgE [Enterobacter cancerogenus ATCC 35316] Length = 395 Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 30/192 (15%), Positives = 66/192 (34%), Gaps = 6/192 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SF+I ++ A+ ++L +++N++N+ TVGF++ + +F+ + Q + + Sbjct: 2 SFDIAISGLNAINEQLGAISNNIANSGTVGFKSGRAEFASLYAE-----GQPLGVGVTNV 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122 + G+ ++ + LD A+ G +F + TR G + +G+LV+ G Y Sbjct: 57 AQSISKNGTVFASASSLDLAINGQGFFVMRDSSGTTAYTRAGYMQTDSNGNLVNNQGMYL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 I G + K + Sbjct: 117 QGYPVDANGVIQTGTVGNLTISSGSLPAKATSSLDFTANLNANEEKPKTATFDPTDETSY 176 Query: 183 PTPLEDLSGVTV 194 ++ Sbjct: 177 NHTYATQVYDSL 188 Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 22/214 (10%), Positives = 61/214 (28%), Gaps = 14/214 (6%) Query: 42 SEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101 ++V ++ + K FV + + + + L+ + LT Sbjct: 182 TQVYDSLGREHTLKQYFVKTDDNTWQVHYYMDDKSMGDAKDMTFNEQGILLKPNGAVNLT 241 Query: 102 RDG----RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK---- 153 + + + + G + + + + + G + Sbjct: 242 AAIPGADSISLDLNYNGTTQFGSDFSVSKNNGNGYASGERTGQTIDKDGSVYATFSNGER 301 Query: 154 -VIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSM 207 + + L + G + + + + T + LE SN N Sbjct: 302 LLQGQVVLANFSNPNGLSSQNGTTWTQTASSGAPLLGTPGTGLLGALTSNTLEGSNVNLT 361 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 E+ ++ + + + T +I N+ M + + Sbjct: 362 DELVGLMTAQRNYQANTKVISTNDSMMTALFQAV 395 >gi|148558720|ref|YP_001258004.1| flagellar hook protein FlgE [Brucella ovis ATCC 25840] gi|148370005|gb|ABQ62877.1| flagellar hook protein FlgE [Brucella ovis ATCC 25840] Length = 377 Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 34/123 (27%), Positives = 54/123 (43%), Gaps = 24/123 (19%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M G++ A RLSTVADN++N TVG++ + +FS +V Sbjct: 6 MMR---TGVSGMNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAG--------- 53 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASG 119 + S D A++G+ +F ++ P G TR G F +G LV+++G Sbjct: 54 -----------QYNSGSVLTDLAIDGNGYFVVQGPGGSTYLTRAGSFVPDKNGDLVNSAG 102 Query: 120 KYP 122 Y Sbjct: 103 YYL 105 Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats. Identities = 10/54 (18%), Positives = 22/54 (40%) Query: 186 LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + + G LE+SNA+ E+ MI + + + + + + M + Sbjct: 321 PQGDGMGKIMSGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGSELMDVLVN 374 >gi|83309603|ref|YP_419867.1| flagellar hook protein FlgE [Magnetospirillum magneticum AMB-1] gi|82944444|dbj|BAE49308.1| Flagellar hook protein FlgE [Magnetospirillum magneticum AMB-1] Length = 843 Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 37/192 (19%), Positives = 63/192 (32%), Gaps = 9/192 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + G++ + + ++DN++N +T G++ KV F +V + V S Sbjct: 6 ALFSGVSGLASQSSAMGAISDNITNVNTTGYKGAKVNFQTLVTKQVSLTTYSPGGVQSKP 65 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGI--------ILTRDGRFKVTDDGSLV 115 G +T D AL G F + + TR G FKV +G L Sbjct: 66 RAAIDSQGLLQATTNSTDLALSGQGMFVVNTDPDPATSGNGMFAYTRAGSFKVDKEGYLQ 125 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 + SG Y + + G K A + V+ + + S Sbjct: 126 NVSGFYVQGWPLQPTNN-NVLAKPTELTVDGNTYMKAYKQADGTFHYVNQNIINPQETKS 184 Query: 176 GISPNIPPTPLE 187 I T + Sbjct: 185 LNLKTIGGTADQ 196 Score = 68.7 bits (166), Expect = 6e-10, Method: Composition-based stats. Identities = 10/92 (10%), Positives = 30/92 (32%), Gaps = 5/92 (5%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLEDSNANSM 207 + + + + + G + + +V+ LE S + Sbjct: 749 RPVFQIPVATFTNPNGLESLTGNSWIETNTSGSYTLRQANNAGAGSVQSASLEASTVDIG 808 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E MI + +++ +I ++ + E ++ Sbjct: 809 SEFTTMIITQRAYSAAAKIITTADQMLDELVQ 840 >gi|54297182|ref|YP_123551.1| flagellar hook protein FlgE [Legionella pneumophila str. Paris] gi|53750967|emb|CAH12378.1| Flagellar hook protein FlgE [Legionella pneumophila str. Paris] Length = 437 Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 60/122 (49%), Gaps = 2/122 (1%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV--GAIKNDIDQKISFVASG 62 FN L+ A + L + +N++N+ T+GF+ + +F+++ A + + V Sbjct: 3 FNTALSGIQASTRDLEVIGNNIANSATIGFKGSRAEFADIYSSSAYGSGGNAVGGGVKLS 62 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 + + S G+ ++ LD A+ G +F L + TR G+FK+ ++ +V+A+ + Sbjct: 63 RVHQSFATGTLSTSNNTLDLAVNGSGFFILSDQGAKVYTRAGQFKLNNENYIVNANNQRL 122 Query: 123 VL 124 Sbjct: 123 TG 124 Score = 68.4 bits (165), Expect = 9e-10, Method: Composition-based stats. Identities = 12/90 (13%), Positives = 28/90 (31%), Gaps = 5/90 (5%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYE 209 + + L + + N+ + + + + G LE+SN + E Sbjct: 346 MGQIQLANFADPESLQNLGNTNWAETTSSGQPLISAPGSGGLGLINSGRLEESNVDLTSE 405 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + +I + F + I + I Sbjct: 406 LVNLISAQRNFQANAQTIRTGDAITQTIIN 435 >gi|149178721|ref|ZP_01857304.1| flagellar hook protein FlgE [Planctomyces maris DSM 8797] gi|148842419|gb|EDL56799.1| flagellar hook protein FlgE [Planctomyces maris DSM 8797] Length = 563 Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 57/168 (33%), Gaps = 12/168 (7%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------KN 50 ++ N L E + + +N++N T GF+ V F+ + Sbjct: 5 SALNTSLGGLSLNETSIDVLGNNIANAGTNGFKASNVLFTTQLSRTLSVGSRPTTSNGGT 64 Query: 51 DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTD 110 + Q S GS ++ + D A++GD +F L+ P G + +R+G F++ Sbjct: 65 NPRQVGLGALSASIRKDFTQGSVTNSTSPSDLAIQGDGFFILDGPDGQVYSRNGNFELNS 124 Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158 L + SG + G+++ Sbjct: 125 QSLLTNQSGFKVQGYGVDEDFNLVTTTLTDIEIPLGDLNVAQATQNVQ 172 Score = 55.6 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 33/91 (36%), Gaps = 5/91 (5%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSM 207 + + + L QG + NS + P + T++ G +E SN + Sbjct: 469 RTLGQITLSRFSNPQGLLEFGNSTFQEGVSSGPPFLVTPGNFGAGTIRAGSIELSNTDVG 528 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 + +I + + +I ++ + E + Sbjct: 529 RSLVDLIVASTNYRGNARVISSVQQLVDELL 559 >gi|118589967|ref|ZP_01547371.1| flagellar basal body FlaE [Stappia aggregata IAM 12614] gi|118437464|gb|EAV44101.1| flagellar basal body FlaE [Stappia aggregata IAM 12614] Length = 424 Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 34/123 (27%), Positives = 60/123 (48%), Gaps = 2/123 (1%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 G++ A +L TVA+N+ N+ T G++ K +FS +V + V + + Sbjct: 7 MRSGVSGMNAQSSKLGTVAENIMNSSTTGYKRAKSEFSSLVVSQGAGSFNSG-GVEAHTQ 65 Query: 65 YLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGKYPV 123 Y + G+ T ++LD A++G+ +F + + G LTR G F DG L++ +G Y Sbjct: 66 YEITKKGNLSFTTSKLDLAIDGNGFFVVGNEAGESFLTRAGHFVPDGDGYLLNTAGYYLQ 125 Query: 124 LDM 126 Sbjct: 126 GYP 128 Score = 62.2 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 16/124 (12%), Positives = 37/124 (29%), Gaps = 5/124 (4%) Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 D + + + + I + L +V R + S + Sbjct: 298 NVDADGNAPSAVKNVEFADDGTLFAVYANGDRRAIYKIPLANVPSPDRLSNRSGNVYSTS 357 Query: 181 IPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 + + +K G LEDSN + E+ MI + + + + + + Sbjct: 358 FDSGDVRVGFAGEGGMGAIKVGGLEDSNVDLGNELTSMIESQRTYTANSQVFKAGSDLLE 417 Query: 236 EAIR 239 + + Sbjct: 418 QLVN 421 >gi|87307400|ref|ZP_01089545.1| flagellar hook protein FlgE [Blastopirellula marina DSM 3645] gi|87290140|gb|EAQ82029.1| flagellar hook protein FlgE [Blastopirellula marina DSM 3645] Length = 929 Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 28/171 (16%), Positives = 59/171 (34%), Gaps = 13/171 (7%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN------------DIDQKISFV 59 A E ++ + +N++N+ TVGF+ F+ + + Q V Sbjct: 1 MTAAETQIDVLGNNLANSQTVGFKASDALFANQFLQTRGLGSKPSETDGGTNPRQVGLGV 60 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLVSAS 118 + + G+ + D A++GD +F ++ G TR+G FK + LV+ Sbjct: 61 MVAEITPNFTQGTIEVSSNPSDLAIQGDGFFIVQGNNGERLYTRNGIFKTNSNNELVTIG 120 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169 G+ + I + + G + ++ + Sbjct: 121 GERVLGFGIDENFNIQETQLVPLTIPLGAAAVAKATENVYLEGTLPATGDL 171 Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 11/90 (12%), Positives = 31/90 (34%), Gaps = 5/90 (5%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYE 209 + + L G +R N+ + + ++ G +E SN + Sbjct: 837 LGMIQLARFANPSGLEQRGNNLFAAGVNSGLPVQGDAGEEGIGSIIAGAVELSNTDIGGN 896 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + +I + ++ + +I ++ E + Sbjct: 897 LIDLILASTQYRGSSRIITTAQQLFDELLN 926 >gi|170742312|ref|YP_001770967.1| flagellar basal body FlaE domain-containing protein [Methylobacterium sp. 4-46] gi|168196586|gb|ACA18533.1| flagellar basal body FlaE domain protein [Methylobacterium sp. 4-46] Length = 456 Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 39/173 (22%), Positives = 71/173 (41%), Gaps = 14/173 (8%) Query: 1 MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 M ++ ++ A L+ ++ N++N T G+R I F++++ ND S Sbjct: 1 MDVFSAMQTAVSGLQAQAFSLNNISGNIANAQTTGYRRIDTTFADLLAEQPNDRQTSGS- 59 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-----------ILTRDGRFK 107 VA+ ++ + G+ STG + AL G +F + +P + TR G F Sbjct: 60 VAASSQFTNTLQGNIASTGITTNMALNGGGFFVVRTPSATSGGQPSFTSQDLYTRRGDFA 119 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 V DG LV+ +G Y V + + +G + +Q I+ Sbjct: 120 VDKDGYLVNGAGSYLVGQSLDPRTGQATGNGVIRIGNQALPAQATTTISYAAN 172 Score = 68.4 bits (165), Expect = 9e-10, Method: Composition-based stats. Identities = 25/201 (12%), Positives = 63/201 (31%), Gaps = 4/201 (1%) Query: 44 VVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103 + A +N D + + + ++T + + + T Sbjct: 258 LFYAKQNGTDSTATAWTNAGTAFTFNASGQLTTPAGGSATIPNVTVDGVPLGTLTLNTAS 317 Query: 104 GRF-KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162 G + G V+ + + + + +A +G+ Sbjct: 318 GGLTQYGAAGGQVTTNTLQQNGSASGTLRSLAVT--SDGRVTGTYSNGTTATLAQVGIAR 375 Query: 163 VDMSQGFVRRENSGISPNI-PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221 + + + P+ L+G TV G +E SN ++ E ++I Q ++ Sbjct: 376 FNAPDALKAESLGNYAQTVESGGPVSGLAGTTVVGGNVEQSNTDTANEFSKLIITQQAYS 435 Query: 222 SITTLIDENEKSMLEAIRNIA 242 + T ++ ++ M + + I Sbjct: 436 ANTRVMSTAQQMMSDLVNIIR 456 >gi|323967017|gb|EGB62443.1| fagellar hook-basal body protein [Escherichia coli M863] gi|327253475|gb|EGE65113.1| flagellar hook protein flgE [Escherichia coli STEC_7v] Length = 401 Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 71/195 (36%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ +LV+ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q+ K T + S + + N Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPSVKGFDASNAD 176 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 177 SYNKKGSVTVFDSQG 191 Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + + + +++ +++ + L + ++G ++ S Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 337 Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + T+ G LE SN + E+ MI + + S I ++ + Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397 Query: 238 IR 239 + Sbjct: 398 VN 399 >gi|73539450|ref|YP_299817.1| flagellar hook protein FlgE [Ralstonia eutropha JMP134] gi|72122787|gb|AAZ64973.1| Flagellar basal body rod protein:Protein of unknown function DUF1078:Flagellar basal body FlaE [Ralstonia eutropha JMP134] Length = 417 Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 24/212 (11%), Positives = 60/212 (28%), Gaps = 14/212 (6%) Query: 42 SEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101 ++V + + + G+ + A + + SP I LT Sbjct: 205 QQLVAYFGKSSSGPTVTGGTDWTMNVTDAAGNVMGGSPITLAFDSNGKLTSTSPATITLT 264 Query: 102 RDGRFKVTDDGSLVSASG----------KYPVLDMASVPIQIPQKDEIFNVGEKGEISQK 151 + +D + +G P D + + E +++ Sbjct: 265 KTMTNGASDLSMKLDLAGTTQFGSDNDVMSPSQDGYASGALLGFAIEGDGTVRASYSNEQ 324 Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPP----TPLEDLSGVTVKRGFLEDSNANSM 207 +V+ + L S +G + + + + +E SN + Sbjct: 325 TQVLGQVVLASFGNPEGLKPEGGNTWAATGASGEAIVGAPGGARGQLLSSAVEASNVDLS 384 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E+ +I + + + I+ + M + Sbjct: 385 GELVNLIVAQRNYQANAKTIETQNQVMNSLMN 416 Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 31/153 (20%), Positives = 61/153 (39%), Gaps = 7/153 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 F G++ A L + +N++N++TVG++ +F++V K + ++ V Sbjct: 2 GFGQGVSGINAAAANLDVIGNNIANSNTVGYKASTAQFADVYAGTKIGLGTTVNSV---- 57 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRG--IILTRDGRFKVTDDGSLVSASGKY 121 S G+ +T LD A+ + F + +R+G+F TDDG +V+A G Sbjct: 58 -VQSFTQGNIQATNRSLDVAITNGSGFFRLVGTDGSVHFSRNGQFARTDDGRIVNAQGLQ 116 Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV 154 + + + G + Sbjct: 117 LTGFPPAGSGGGALPQPLVVSSAQMPPKPTGNI 149 >gi|296283217|ref|ZP_06861215.1| flagellar hook protein FlgE [Citromicrobium bathyomarinum JL354] Length = 412 Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 13/90 (14%), Positives = 32/90 (35%), Gaps = 5/90 (5%) Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANS 206 + + + + + G R + + + + T+ G LE SN + Sbjct: 317 SRPVFQLPMATFANPDGLSRLPGNAYTVSQQSGNVAIGRPGELGSGTISAGTLEASNVDL 376 Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 E MI + +++ + +I + + E Sbjct: 377 AQEFTNMIRFQRAYSASSKIITTVDDMLQE 406 Score = 64.1 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 50/111 (45%), Gaps = 4/111 (3%) Query: 19 LSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGT 78 ++TVADN++N +TVG++ + F +V + VA+ + + G + + Sbjct: 1 MATVADNITNINTVGYKGAEADFRTLVTDGRLKSSYSAGGVAAAPRAMISKQGLLQAASS 60 Query: 79 ELDFALEGDAWFALESP----RGIILTRDGRFKVTDDGSLVSASGKYPVLD 125 + D ++G +F + GI TR G F+ + G L + G + Sbjct: 61 QTDLGIDGGGFFVTRTGSGADSGIAFTRAGAFRPDEQGYLRNTGGYFLQGW 111 >gi|145297454|ref|YP_001140295.1| flagellar hook protein FlgE [Aeromonas salmonicida subsp. salmonicida A449] gi|142850226|gb|ABO88547.1| lateral flagellar hook protein LfgE [Aeromonas salmonicida subsp. salmonicida A449] Length = 397 Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 12/144 (8%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SF+IGL+ A+ Q LS +++N++N T GF++ + +F+ + G N++ Q Sbjct: 2 SFSIGLSGLRAVNQELSVISNNVANASTAGFKSSRAEFAAIYGVEMNNVSQN-------- 53 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASGKYP 122 G + TG LD A+ G +F L+ TR G F+ L +A+G Sbjct: 54 ---FDRNGDVMRTGKGLDLAISGSGFFVLKDSNGQTSYTRAGMFQRDASNYLTTANGTRL 110 Query: 123 VLDMASVPIQIPQKDEIFNVGEKG 146 + ++ + G Sbjct: 111 QGYTTNDAGELQSGVVGDIQVKAG 134 Score = 67.6 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 10/94 (10%), Positives = 29/94 (30%), Gaps = 5/94 (5%) Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNAN 205 + + + + + G ++ N+ + + T + G E SN + Sbjct: 302 QNLLQGQVVMANFTNPNGLIQTNNTTWQQSFSSGQPVLGAPGTGTMGSLTAGAYESSNVD 361 Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E+ ++ + + + I +K Sbjct: 362 LTGELVSLMTSQRNYQANAKTISSADKMTQVLFN 395 >gi|51597637|ref|YP_071828.1| flagellar hook protein FlgE [Yersinia pseudotuberculosis IP 32953] gi|186896771|ref|YP_001873883.1| flagellar hook protein FlgE [Yersinia pseudotuberculosis PB1/+] gi|51590919|emb|CAH22575.1| Putative FlgE-like flagellar hook protein [Yersinia pseudotuberculosis IP 32953] gi|186699797|gb|ACC90426.1| flagellar basal body FlaE domain protein [Yersinia pseudotuberculosis PB1/+] Length = 414 Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 36/132 (27%), Positives = 57/132 (43%), Gaps = 6/132 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SF+I A A ++L+T+++N++N+ T GF+ + +FS + Q + SG Sbjct: 2 SFSIANTALNAHTEQLNTISNNIANSATKGFKASRTEFSSMYAQS-----QPLGVAVSGV 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122 + G TG LD A+ G +F + TR G F+ DG LV+ G Sbjct: 57 SQNISKDGQKEKTGMGLDLAISGGGFFVVRESSGDKAYTRAGMFRSDVDGYLVNGQGMKL 116 Query: 123 VLDMASVPIQIP 134 A I Sbjct: 117 QGYPADAAGNIQ 128 Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 22/140 (15%), Positives = 48/140 (34%), Gaps = 9/140 (6%) Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 G + + +I ++ GE +GKV+ L + Sbjct: 279 TQLSQGFTTTRNKSDGYTSGVKNGERIESDGSVYATFSNGERMLQGKVV----LANFASP 334 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFN 221 G V + + S + + T ++ G LE+SN + E+ ++ + + Sbjct: 335 NGLVTQNGTSWSESNKSGAALLGTPGTGLLGSLESGALENSNVDITAELVGLMTAQRNYQ 394 Query: 222 SITTLIDENEKSMLEAIRNI 241 + T +I N+ M + + Sbjct: 395 ASTKIISTNDSMMNALFQVL 414 >gi|251789168|ref|YP_003003889.1| flagellar hook protein FlgE [Dickeya zeae Ech1591] gi|247537789|gb|ACT06410.1| flagellar basal body FlaE domain protein [Dickeya zeae Ech1591] Length = 405 Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 34/192 (17%), Positives = 72/192 (37%), Gaps = 6/192 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SF+ ++ A L + +N++N+ TVGF+ + F+++ + +++ V Sbjct: 2 SFSQAVSGLNAASNNLDVIGNNIANSATVGFKASNISFADMYAGSNVGLGTRVASV---- 57 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122 GS ST LD A+ G ++ L + ++ +R+G+F + ++V+A G Sbjct: 58 -LQDFTNGSINSTSRALDVAINGSGFYRLLNGNGSVVYSRNGQFTLDSSRNIVNAQGLQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q E + K + + S N+ N Sbjct: 117 TGFPATGTPPAIQSGADPVGLSIPENTMSAKATNIASIIANLNSSDSTNTWNATDPTNTS 176 Query: 183 PTPLEDLSGVTV 194 + ++ Sbjct: 177 NYKGSITTYDSL 188 Score = 72.2 bits (175), Expect = 6e-11, Method: Composition-based stats. Identities = 26/192 (13%), Positives = 51/192 (26%), Gaps = 5/192 (2%) Query: 53 DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDG 112 D I+ S T A+ T F + Sbjct: 212 DTSITGAGFQGPTRLTFDTSGALVPTPPATAVTPVTLSMASLNGSAASTFTLAFTGSVQQ 271 Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172 + S S K P D +++ +++ + L + +G + Sbjct: 272 NSGSNSTKTPTQDGYEPGELTGYSISNDGSVIGSYSNKRTQLLGQIVLANFANPEGLSPQ 331 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFL-----EDSNANSMYEMGQMIHLTQKFNSITTLI 227 ++ + S T G L E SN + E+ MI + + S I Sbjct: 332 GDNVWAATNNSGQAVVGSAGTGNFGNLVGKATESSNVDMSKELVNMIVAQRNYQSNAQTI 391 Query: 228 DENEKSMLEAIR 239 ++ + + Sbjct: 392 KTQDQILNTLVN 403 >gi|118474252|ref|YP_891218.1| flagellar hook protein [Campylobacter fetus subsp. fetus 82-40] gi|118413478|gb|ABK81898.1| flagellar hook protein [Campylobacter fetus subsp. fetus 82-40] Length = 546 Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 67/167 (40%), Gaps = 7/167 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS--- 57 M + G++ + + +++++SN +TVG+++ +F ++ N Sbjct: 1 MMIGYYNGISGIKSGNFGIDVISNDISNINTVGYKSSTAEFKSILYQSLNQTSTSPVTSQ 60 Query: 58 ---FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGS 113 S L+ + GS +T D A+ GD +F L G TR+G F +G Sbjct: 61 IGLGSTSMATSLNFKPGSLQNTDKVFDLAIVGDGFFGLSGINGEQYFTRNGDFSKDVNGD 120 Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 +V+ +G Y + MA++ + +G + K G Sbjct: 121 IVNRNGLYLLGTMANLNAIALSPNAEQKLGNLMGNNDKQAFTLQTGT 167 Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 33/93 (35%), Gaps = 8/93 (8%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPL--EDLSGVTVKRGF------LEDSNANS 206 +A + LY +QG + + V G LE SN + Sbjct: 451 VAKVALYHFQNNQGLSKSSENTYQTTANSGQPIFYQDQNGNVVYGAAIKNSTLEMSNVDL 510 Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + +I + + +++ I +++ + +AI Sbjct: 511 GVSLTDLIIMQKAYDASAKSITTSDQMIQKAIN 543 >gi|157147102|ref|YP_001454421.1| hypothetical protein CKO_02879 [Citrobacter koseri ATCC BAA-895] gi|157084307|gb|ABV13985.1| hypothetical protein CKO_02879 [Citrobacter koseri ATCC BAA-895] Length = 396 Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 35/147 (23%), Positives = 62/147 (42%), Gaps = 6/147 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SFNI + A+ ++L+ +++N++N+ TVGF++ + +FS + Q + SG Sbjct: 2 SFNIATSGLNAITEQLNAISNNIANSGTVGFKSGRAEFSSLYAE-----SQPLGVGVSGV 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ +F + TR G F G+L++ G Y Sbjct: 57 TQSITRGGNISTTGNALDLAISDSGFFMVRDSTGTTAYTRAGYFGTDSSGNLINNLGMYL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEIS 149 + +I G I Sbjct: 117 QGYPVNANGEIEVGTIGNLTISSGSIP 143 Score = 74.9 bits (182), Expect = 9e-12, Method: Composition-based stats. Identities = 15/94 (15%), Positives = 33/94 (35%), Gaps = 5/94 (5%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSM 207 + + L + G ++ + + T VK G LE SN + Sbjct: 303 MLQGQLVLANFANPNGLASKDGTTWVQTASSGAPLTGTPGTGLLGSVKSGALESSNVDLT 362 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 E+ ++ + + + T +I N+ M + + Sbjct: 363 SELVGLMTAQRNYQANTKVISTNDNMMNALFQAV 396 >gi|304397204|ref|ZP_07379083.1| fagellar hook-basal body protein [Pantoea sp. aB] gi|304355353|gb|EFM19721.1| fagellar hook-basal body protein [Pantoea sp. aB] Length = 418 Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 16/125 (12%), Positives = 39/125 (31%), Gaps = 5/125 (4%) Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 P D + +QK +++ + L S +G + ++ Sbjct: 292 GSPTQDGYAPGDLTSYAINNDGTITGSYSNQKTQLLGQIVLSSFSNPEGLQSKGDNVWQA 351 Query: 180 NIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 + + ++ G LE SN + E+ MI + + + I ++ + Sbjct: 352 SSASGQAAIGLANTGTFGSLTAGALESSNVDMSKELVNMIVAQRNYQANAQTIKTQDQIL 411 Query: 235 LEAIR 239 + Sbjct: 412 NTLVN 416 Score = 75.7 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 36/195 (18%), Positives = 74/195 (37%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SF+ ++ A L + +N++N+ T GF++ + F+++ + K++ V Sbjct: 2 SFSQAVSGLGAASSNLDVIGNNIANSATAGFKSSTIAFADMFAGSNVGLGTKVAAV---- 57 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122 + G+ +T LD AL G+ +F + G+ +R+G+ + + +LV+ G Sbjct: 58 -IQNFNDGATTTTSRGLDVALSGNGFFRMTDSSGGVFYSRNGQLTLDANRNLVNTQGLNV 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 AS Q + T GL + S + + N Sbjct: 117 TGYPASGSPATIQAGANPVALRIPTEQMPARATTTAGLVANLNSTDTTPSVPTFSTANAD 176 Query: 183 PTPLEDLSGVTVKRG 197 + + V +G Sbjct: 177 SYNKKTTATVFDSQG 191 >gi|301051140|ref|ZP_07197970.1| flagellar hook protein FlgE [Escherichia coli MS 185-1] gi|300297161|gb|EFJ53546.1| flagellar hook protein FlgE [Escherichia coli MS 185-1] Length = 401 Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 34/195 (17%), Positives = 73/195 (37%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ +LV+ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q+ K T + S + N+ + N Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDSLPSVNAFDASNAD 176 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 177 SYNKKGSVTVFDSQG 191 Score = 73.4 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + + + +++ +++ + L + ++G ++ S Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 337 Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + T+ G LE SN + E+ MI + + S I ++ + Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397 Query: 238 IR 239 + Sbjct: 398 VN 399 >gi|123442784|ref|YP_001006761.1| flagellar hook protein FlgE [Yersinia enterocolitica subsp. enterocolitica 8081] gi|332161322|ref|YP_004297899.1| flagellar hook protein FlgE [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|122089745|emb|CAL12598.1| flagellar hook protein FlgE [Yersinia enterocolitica subsp. enterocolitica 8081] gi|318605242|emb|CBY26740.1| flagellar hook protein FlgE [Yersinia enterocolitica subsp. palearctica Y11] gi|325665552|gb|ADZ42196.1| flagellar hook protein FlgE [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330860606|emb|CBX70903.1| flagellar hook protein flgE [Yersinia enterocolitica W22703] Length = 419 Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 14/144 (9%), Positives = 40/144 (27%), Gaps = 5/144 (3%) Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 T + + + S + + + + +++ + + Sbjct: 274 TFTLSVAGSKQQNTGTDSIVTQNQTGYAAGEFTGFQINNDGSIVGTYSNSQTQLLGQIVM 333 Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIH 215 + +G ++ + T+ G LE SN + E+ MI Sbjct: 334 VNFANPEGLSSEGDNVWKETLSSGNPILGTAGSGGFGTLTSGALESSNVDLSKELVNMIV 393 Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239 + + S I ++ + + Sbjct: 394 AQRNYQSNAQTIKTQDQILQTLVN 417 Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 27/134 (20%), Positives = 57/134 (42%), Gaps = 6/134 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 F+ ++ A L + +N++N+ T GF+ V F+++ Q V Sbjct: 2 GFSQAVSGLNAASSNLDVIGNNIANSATSGFKAGSVSFADMFA-----GSQTGMGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +T LD A+ +F ++ G++ R+G+FK+ ++ ++V+ G Sbjct: 57 ITQDFNDGTTTTTNRRLDLAISQSGFFRMQDSSGGVLYARNGQFKLDENRNIVNMQGLSL 116 Query: 123 VLDMASVPIQIPQK 136 A+ Q+ Sbjct: 117 TGYPATGTPPTVQQ 130 >gi|22126390|ref|NP_669813.1| flagellar hook protein FlgE [Yersinia pestis KIM 10] gi|45441409|ref|NP_992948.1| flagellar hook protein FlgE [Yersinia pestis biovar Microtus str. 91001] gi|51596011|ref|YP_070202.1| flagellar hook protein FlgE [Yersinia pseudotuberculosis IP 32953] gi|108807173|ref|YP_651089.1| flagellar hook protein FlgE [Yersinia pestis Antiqua] gi|108812483|ref|YP_648250.1| flagellar hook protein FlgE [Yersinia pestis Nepal516] gi|145598610|ref|YP_001162686.1| flagellar hook protein FlgE [Yersinia pestis Pestoides F] gi|149366251|ref|ZP_01888286.1| flagellar hook protein FlgE [Yersinia pestis CA88-4125] gi|153950658|ref|YP_001401290.1| flagellar hook protein FlgE [Yersinia pseudotuberculosis IP 31758] gi|162421636|ref|YP_001606473.1| flagellar hook protein FlgE [Yersinia pestis Angola] gi|165925992|ref|ZP_02221824.1| flagellar hook protein FlgE [Yersinia pestis biovar Orientalis str. F1991016] gi|165938693|ref|ZP_02227248.1| flagellar hook protein FlgE [Yersinia pestis biovar Orientalis str. IP275] gi|166010935|ref|ZP_02231833.1| flagellar hook protein FlgE [Yersinia pestis biovar Antiqua str. E1979001] gi|166210871|ref|ZP_02236906.1| flagellar hook protein FlgE [Yersinia pestis biovar Antiqua str. B42003004] gi|167401045|ref|ZP_02306548.1| flagellar hook protein FlgE [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167420383|ref|ZP_02312136.1| flagellar hook protein FlgE [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425748|ref|ZP_02317501.1| flagellar hook protein FlgE [Yersinia pestis biovar Mediaevalis str. K1973002] gi|170024647|ref|YP_001721152.1| flagellar hook protein FlgE [Yersinia pseudotuberculosis YPIII] gi|186895114|ref|YP_001872226.1| flagellar hook protein FlgE [Yersinia pseudotuberculosis PB1/+] gi|218928922|ref|YP_002346797.1| flagellar hook protein FlgE [Yersinia pestis CO92] gi|229896242|ref|ZP_04511412.1| flagellar hook protein FlgE [Yersinia pestis Pestoides A] gi|229897177|ref|ZP_04512333.1| flagellar hook protein FlgE [Yersinia pestis biovar Orientalis str. PEXU2] gi|229897903|ref|ZP_04513054.1| flagellar hook protein FlgE [Yersinia pestis biovar Orientalis str. India 195] gi|229902865|ref|ZP_04517982.1| flagellar hook protein FlgE [Yersinia pestis Nepal516] gi|270486645|ref|ZP_06203719.1| flagellar hook protein FlgE [Yersinia pestis KIM D27] gi|294504030|ref|YP_003568092.1| flagellar hook protein [Yersinia pestis Z176003] gi|21959376|gb|AAM86064.1|AE013853_12 hook protein [Yersinia pestis KIM 10] gi|45436269|gb|AAS61825.1| flagellar hook protein FlgE [Yersinia pestis biovar Microtus str. 91001] gi|51589293|emb|CAH20914.1| flagellar hook protein FlgE [Yersinia pseudotuberculosis IP 32953] gi|108776131|gb|ABG18650.1| flagellar hook protein FlgE [Yersinia pestis Nepal516] gi|108779086|gb|ABG13144.1| flagellar hook protein FlgE [Yersinia pestis Antiqua] gi|115347533|emb|CAL20442.1| flagellar hook protein FlgE [Yersinia pestis CO92] gi|145210306|gb|ABP39713.1| flagellar hook protein FlgE [Yersinia pestis Pestoides F] gi|149292664|gb|EDM42738.1| flagellar hook protein FlgE [Yersinia pestis CA88-4125] gi|152962153|gb|ABS49614.1| flagellar hook protein FlgE [Yersinia pseudotuberculosis IP 31758] gi|162354451|gb|ABX88399.1| flagellar hook protein FlgE [Yersinia pestis Angola] gi|165913307|gb|EDR31929.1| flagellar hook protein FlgE [Yersinia pestis biovar Orientalis str. IP275] gi|165922196|gb|EDR39373.1| flagellar hook protein FlgE [Yersinia pestis biovar Orientalis str. F1991016] gi|165990279|gb|EDR42580.1| flagellar hook protein FlgE [Yersinia pestis biovar Antiqua str. E1979001] gi|166208051|gb|EDR52531.1| flagellar hook protein FlgE [Yersinia pestis biovar Antiqua str. B42003004] gi|166962078|gb|EDR58099.1| flagellar hook protein FlgE [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167049434|gb|EDR60842.1| flagellar hook protein FlgE [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167055147|gb|EDR64944.1| flagellar hook protein FlgE [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169751181|gb|ACA68699.1| flagellar basal body FlaE domain protein [Yersinia pseudotuberculosis YPIII] gi|186698140|gb|ACC88769.1| flagellar basal body FlaE domain protein [Yersinia pseudotuberculosis PB1/+] gi|229680312|gb|EEO76411.1| flagellar hook protein FlgE [Yersinia pestis Nepal516] gi|229688944|gb|EEO81009.1| flagellar hook protein FlgE [Yersinia pestis biovar Orientalis str. India 195] gi|229693514|gb|EEO83563.1| flagellar hook protein FlgE [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701165|gb|EEO89194.1| flagellar hook protein FlgE [Yersinia pestis Pestoides A] gi|262361784|gb|ACY58505.1| flagellar hook protein [Yersinia pestis D106004] gi|262366080|gb|ACY62637.1| flagellar hook protein [Yersinia pestis D182038] gi|270335149|gb|EFA45926.1| flagellar hook protein FlgE [Yersinia pestis KIM D27] gi|294354489|gb|ADE64830.1| flagellar hook protein [Yersinia pestis Z176003] gi|320015467|gb|ADV99038.1| flagellar hook protein FlgE [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 428 Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 34/192 (17%), Positives = 69/192 (35%), Gaps = 11/192 (5%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 F+ ++ A L + +N++N+ T GF+ V F+++ Q V Sbjct: 2 GFSQAVSGMNAASSNLDVIGNNIANSATSGFKAGSVSFADMFA-----GSQTGMGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +T LD A+ + +F ++ GI R+G+FK+ ++ ++V+ G Sbjct: 57 ITQDFNDGTATTTNRRLDLAISQNGFFRMQDSSGGIYYARNGQFKLDENRNIVNMQGLNL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ + +S +I+ S +M + P Sbjct: 117 TGYPATGTPP-----TVQQGANPVPLSIPQDMISAKATTSGNMVANLTSTHDVIAEATSP 171 Query: 183 PTPLEDLSGVTV 194 P + V Sbjct: 172 FDPDNPDTYSFV 183 Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 13/123 (10%), Positives = 35/123 (28%), Gaps = 5/123 (4%) Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 + + +Q+ +++ + + + +G ++ Sbjct: 304 QNQTGYAAGEFTGFQINSDGSVVGTYSNQQTQLLGQIVMVNFSNPEGLSSEGDNVWKETQ 363 Query: 182 PPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 T+ G LE SN + E+ MI + + S I ++ + Sbjct: 364 SSGNPTLGTAGSGGFGTLTSGALESSNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILQT 423 Query: 237 AIR 239 + Sbjct: 424 LVS 426 >gi|114777402|ref|ZP_01452399.1| hypothetical protein SPV1_13919 [Mariprofundus ferrooxydans PV-1] gi|114552184|gb|EAU54686.1| hypothetical protein SPV1_13919 [Mariprofundus ferrooxydans PV-1] Length = 467 Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 28/133 (21%), Positives = 56/133 (42%), Gaps = 6/133 (4%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN----DIDQKISF 58 + G + + + + V DN++N +++GF++ V F++V+ Q + Sbjct: 5 NALFSGASGLTSFGEAVRVVGDNIANVNSIGFKSQSVSFTDVLSQTIGVSSTGSQQVGNG 64 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP--RGIILTRDGRFKVTDDGSLVS 116 V G ++ GS +T + D A+ G+ FAL P +R G F++ + +L+ Sbjct: 65 VKIGTISRNQMQGSIQNTSSATDMAINGNGLFALRDPATNQTSYSRAGSFQLDKNFNLID 124 Query: 117 ASGKYPVLDMASV 129 G Sbjct: 125 GGGNIVQGYAIDP 137 Score = 65.7 bits (158), Expect = 6e-09, Method: Composition-based stats. Identities = 10/88 (11%), Positives = 28/88 (31%), Gaps = 5/88 (5%) Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLEDSNANSMYEMG 211 + L + + I + T+ LE SN + E Sbjct: 377 QVALAKFPNDAVLNHVGGNLMQETIQSGSPVLEKPGNGGMGTITPYGLEQSNVDLAAEFV 436 Query: 212 QMIHLTQKFNSITTLIDENEKSMLEAIR 239 ++I + + + + + I ++ + ++ Sbjct: 437 KLIVVQRGYEANSKTILTTDQMLSSLMQ 464 >gi|291519588|emb|CBK74809.1| fagellar hook-basal body proteins [Butyrivibrio fibrisolvens 16/4] Length = 582 Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 28/143 (19%), Positives = 53/143 (37%), Gaps = 16/143 (11%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M S G+A + ++ + +N+SN +TV F++ FS+++ + Sbjct: 1 MMRSLFSGVAGLKTHQTKMDVIGNNISNVNTVAFKSSATTFSDIMYQTTQQASGATATRG 60 Query: 61 SG-------------KEYLSKEVGSFISTGTELDFALEG---DAWFALESPRGIILTRDG 104 + G+ STG LD L +F + + + TR G Sbjct: 61 GTNAKQIGLGVTNGATKVSITSAGAAQSTGDALDIRLTDANSTNFFIVSNGSQNLFTRAG 120 Query: 105 RFKVTDDGSLVSASGKYPVLDMA 127 F + +G+L + Y V+ Sbjct: 121 SFYIDGNGNLAMTTTGYLVMGWQ 143 Score = 71.8 bits (174), Expect = 9e-11, Method: Composition-based stats. Identities = 14/129 (10%), Positives = 38/129 (29%), Gaps = 6/129 (4%) Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 G + + + + ++ + + + G + ++ Sbjct: 451 PDGSSMRGEGKKLGTMTGLSVQSDGKIFGSYSNGNTVLLGQIAVAQFANASGLEEKGDNC 510 Query: 177 ISPNIPPTPLE------DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + + G + G LE +N + E MI + F + + +I + Sbjct: 511 YDTTLNSGEFDGIGIDISADGSAMNTGQLEMANVDLSSEFTDMITTQRGFQANSRIITVS 570 Query: 231 EKSMLEAIR 239 + + E I Sbjct: 571 DTMLEELIN 579 >gi|258625234|ref|ZP_05720146.1| Flagellar hook protein flgE [Vibrio mimicus VM603] gi|258582481|gb|EEW07318.1| Flagellar hook protein flgE [Vibrio mimicus VM603] Length = 398 Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 30/122 (24%), Positives = 53/122 (43%), Gaps = 6/122 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SFNI L+ A + L+T+++N++N T GF+ + +F+ V + Q + Sbjct: 2 SFNIALSGLDATNKELNTISNNIANASTFGFKGSRTEFAAVY-----NGMQPGGVEVASI 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGKYP 122 + GS TG +D A+ G +F + G + TR G F + + +G Sbjct: 57 SQNFDKNGSITGTGRAMDMAINGSGFFVTKDSMGQLLYTRSGVFNTDKNNFITGNNGAKL 116 Query: 123 VL 124 Sbjct: 117 QG 118 Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 19/134 (14%), Positives = 45/134 (33%), Gaps = 9/134 (6%) Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172 VS + +++ ++ + GE ++G+V+ L + QG + Sbjct: 269 FGVSTNNANGYTSGELTGVRVEDNGMVYATYDNGESQRQGQVV----LANFADPQGLSKV 324 Query: 173 ENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 ++ + + T + G LE SN + E+ ++ + + + I Sbjct: 325 NDTAWTQSFSSGAPIMGIPGTGSLGELAPGSLEGSNVDLTSELVSLMTAQRNYQANAKTI 384 Query: 228 DENEKSMLEAIRNI 241 +K I Sbjct: 385 STGDKLTQALFNAI 398 >gi|258622488|ref|ZP_05717510.1| Flagellar hook protein flgE [Vibrio mimicus VM573] gi|262173354|ref|ZP_06041031.1| flagellar hook protein FlgE [Vibrio mimicus MB-451] gi|258585188|gb|EEW09915.1| Flagellar hook protein flgE [Vibrio mimicus VM573] gi|261890712|gb|EEY36699.1| flagellar hook protein FlgE [Vibrio mimicus MB-451] Length = 398 Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 30/122 (24%), Positives = 53/122 (43%), Gaps = 6/122 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SFNI L+ A + L+T+++N++N T GF+ + +F+ V + Q + Sbjct: 2 SFNIALSGLDATNKELNTISNNIANASTFGFKGSRTEFAAVY-----NGMQPGGVEVASI 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGKYP 122 + GS TG +D A+ G +F + G + TR G F + + +G Sbjct: 57 SQNFDKNGSITGTGRAMDMAINGSGFFVTKDSMGQLLYTRSGVFNTDKNNFITGNNGAKL 116 Query: 123 VL 124 Sbjct: 117 QG 118 Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 19/134 (14%), Positives = 45/134 (33%), Gaps = 9/134 (6%) Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172 VS + +++ ++ + GE ++G+V+ L + QG + Sbjct: 269 FGVSTNNANGYTSGELTGVRVEDNGMVYATYDNGESQRQGQVV----LANFADPQGLSKV 324 Query: 173 ENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 ++ + + T + G LE SN + E+ ++ + + + I Sbjct: 325 NDTAWTQSFSSGAPIMGIPGTGSLGELAPGSLEGSNVDLTSELVSLMTAQRNYQANAKTI 384 Query: 228 DENEKSMLEAIRNI 241 +K I Sbjct: 385 STGDKLTQALFNAI 398 >gi|238764392|ref|ZP_04625342.1| Flagellar hook protein FlgE [Yersinia kristensenii ATCC 33638] gi|238697418|gb|EEP90185.1| Flagellar hook protein FlgE [Yersinia kristensenii ATCC 33638] Length = 437 Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 15/129 (11%), Positives = 38/129 (29%), Gaps = 5/129 (3%) Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 + S + + +Q+ +++ + + + +G N+ Sbjct: 307 TDSIVTQNQTGYAAGEFTGFQINNDGSVVGTYSNQQTQLLGQIVMVNFANPEGLSSEGNN 366 Query: 176 GISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + T+ G LE SN + E+ MI + + S I Sbjct: 367 VWKETLSSGNAILGTAGSGGFGTLTSGALESSNVDLSKELVNMIVAQRNYQSNAQTIKTQ 426 Query: 231 EKSMLEAIR 239 ++ + + Sbjct: 427 DQILQTLVN 435 Score = 74.9 bits (182), Expect = 9e-12, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 57/134 (42%), Gaps = 6/134 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 F+ ++ A L + +N++N+ T GF+ V F+++ Q V Sbjct: 2 GFSQAVSGLNAASSNLDVIGNNIANSATSGFKAGSVSFADMFA-----GSQTGMGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +T LD A+ + +F ++ GI R+G+FK+ ++ ++V+ G Sbjct: 57 ITQDFNDGTTTTTNRRLDLAISQNGFFRMQDSTGGIFYARNGQFKLDENRNIVNMQGLNL 116 Query: 123 VLDMASVPIQIPQK 136 A+ Q+ Sbjct: 117 TGYPATGTPPTVQQ 130 >gi|324007916|gb|EGB77135.1| flagellar hook protein FlgE [Escherichia coli MS 57-2] Length = 401 Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 34/195 (17%), Positives = 73/195 (37%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ +LV+ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q+ K T + S + N+ + N Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDSLPSVNAFDASNAD 176 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 177 SYNKKGSVTVFDSQG 191 Score = 73.4 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + + + +++ +++ + L + ++G ++ S Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 337 Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + T+ G LE SN + E+ MI + + S I ++ + Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397 Query: 238 IR 239 + Sbjct: 398 VN 399 >gi|188592117|ref|YP_001796715.1| flagellar hook protein flge [Cupriavidus taiwanensis LMG 19424] gi|170938491|emb|CAP63478.1| FlgE: Flagellar hook protein [Cupriavidus taiwanensis LMG 19424] Length = 414 Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 71/206 (34%), Gaps = 16/206 (7%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 F G++ A L + +N++N +TVG++ +F++V + V Sbjct: 2 GFGQGVSGLNAAASNLDVIGNNIANANTVGYKQSAAQFADVYA-----GTKIGLGVRVNS 56 Query: 64 EYLSKEVGSFISTGTELDFAL-EGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKY 121 S G+ ++G LD A+ G+ +F L SP + +R+G+F+ +DG + + G Sbjct: 57 VVQSFNQGNIEASGRSLDVAITNGNGFFRLTSPEGAVYYSRNGQFQRQEDGRITNMQGLQ 116 Query: 122 PVLDMAS---------VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172 A P+ I + AT+ + S G Sbjct: 117 VTGYPAGVAGGAGVQPQPLVISNAQMEPRATSSITAKFQLDSRATVPTQAFASSAGSPPT 176 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGF 198 N + + F Sbjct: 177 SNMFNYSTAINVYDSLGNKQQLMAYF 202 Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 20/219 (9%), Positives = 54/219 (24%), Gaps = 14/219 (6%) Query: 35 RTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES 94 + + + V + + +V G + A + + Sbjct: 195 KQQLMAYFAKVADSAVAPVHPTVAGGTDWQMYVTDVNGNAVGGAPVTLAFDNAGALQSPA 254 Query: 95 PRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEI----------FNVGE 144 + LT+ + SG V Sbjct: 255 AGAVTLTQPAVNGAQAMAMKLDLSGTTQFGADNDVKQLSQNGYTSGSLLGFSVNGDGTIT 314 Query: 145 KGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPL----EDLSGVTVKRGFLE 200 +++ K + + + + +G ++ S S T++ +E Sbjct: 315 GNYSNEQTKPLGQIVMAAFGNVEGLKPEGDNVWSATGSSGQPLLGVAGGSLGTLRSNAVE 374 Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + ++ +I + + + I + M + Sbjct: 375 ASNVDLSGQLVNLIVAQRNYQANAQTIKAQDTVMQTLVN 413 >gi|148358806|ref|YP_001250013.1| flagellar hook protein FlgE [Legionella pneumophila str. Corby] gi|296106851|ref|YP_003618551.1| flagellar hook protein FlgE [Legionella pneumophila 2300/99 Alcoy] gi|148280579|gb|ABQ54667.1| flagellar hook protein FlgE [Legionella pneumophila str. Corby] gi|295648752|gb|ADG24599.1| flagellar hook protein FlgE [Legionella pneumophila 2300/99 Alcoy] Length = 437 Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 29/122 (23%), Positives = 60/122 (49%), Gaps = 2/122 (1%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV--GAIKNDIDQKISFVASG 62 FN L+ A + L + +N++N+ T+GF+ + +F+++ A + + V Sbjct: 3 FNTALSGIQASTRDLEVIGNNIANSATIGFKGSRAEFADIYSSSAYGSGGNAVGGGVKLS 62 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 + + S G+ ++ LD A+ G +F L I TR G+FK+ ++ +V+A+ + Sbjct: 63 RVHQSFATGTLSTSNNTLDLAVNGSGFFILSDQGAKIYTRAGQFKLNNENYIVNANNQRL 122 Query: 123 VL 124 Sbjct: 123 TG 124 Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 13/98 (13%), Positives = 31/98 (31%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLED 201 + + + + L + + N+ + + + V G LE+ Sbjct: 338 YTNGQSLAMGQIQLANFADPESLQNIGNTSWAETTSSGQPLVSAPGSGGLGLVNSGRLEE 397 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ ++I + F + I + I Sbjct: 398 SNVDLTGELVKLISAQRNFQANAQTIRTGDAITQTIIN 435 >gi|315497625|ref|YP_004086429.1| fagellar hook-basal body protein [Asticcacaulis excentricus CB 48] gi|315415637|gb|ADU12278.1| fagellar hook-basal body protein [Asticcacaulis excentricus CB 48] Length = 472 Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 30/132 (22%), Positives = 55/132 (41%), Gaps = 6/132 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 S G+A A LS +++N++N+ T ++ ++ F +V A V S Sbjct: 6 SMQAGVAGLAANSNALSAISNNIANSTTTAYKRVRTDFQSIVTASSTPTGYNAGGVISTT 65 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGI------ILTRDGRFKVTDDGSLVSA 117 ++ +G+ ++LD ++G +F + TRDG F +DG L +A Sbjct: 66 RHMISTLGTLQKASSQLDLGIDGQGFFITTQKSEPGAEDARLFTRDGSFFADEDGYLRNA 125 Query: 118 SGKYPVLDMASV 129 S Y + Sbjct: 126 SNLYLQGWPITA 137 Score = 74.1 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 13/90 (14%), Positives = 32/90 (35%), Gaps = 5/90 (5%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMYE 209 IA + L + + G + + + P + G LE S+ + E Sbjct: 380 IAQLALATFVNADGLTPVSGNAYTVSNDSGPLTLKVPGVSGAGLLGVGTLEASDVDLSEE 439 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +I + +++ + I ++ + E + Sbjct: 440 FTNLIVTQRAYSANSRTITTADEMLQELLN 469 >gi|323976551|gb|EGB71639.1| fagellar hook-basal body protein [Escherichia coli TW10509] Length = 401 Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 72/195 (36%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ +LV+ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q+ K T + S + + + N Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPSVKAFDASNAD 176 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 177 SYNKKGSVTVFDSQG 191 Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + + + +++ +++ + L + ++G ++ S Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 337 Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + T+ G LE SN + E+ MI + + S I ++ + Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397 Query: 238 IR 239 + Sbjct: 398 VN 399 >gi|300024588|ref|YP_003757199.1| flagellar hook-basal body protein [Hyphomicrobium denitrificans ATCC 51888] gi|299526409|gb|ADJ24878.1| flagellar hook-basal body protein [Hyphomicrobium denitrificans ATCC 51888] Length = 417 Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 26/122 (21%), Positives = 52/122 (42%), Gaps = 1/122 (0%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 ++ R+ TVADN++N +T G++ +F+ +V + V++ Sbjct: 7 MTTSISGMAVQSDRMGTVADNIANVNTTGYKEASAEFATLVAE-GHVASYVPGSVSTIAR 65 Query: 65 YLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVL 124 G T + D A+ G+ +F ++SP G ++ +G LV+A+G + Sbjct: 66 RAVTHQGDLSYTNSPTDLAVSGNGFFMVQSPSGTPYLTRAGSFISTNGELVNAAGFTLLG 125 Query: 125 DM 126 Sbjct: 126 YD 127 Score = 63.0 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 10/83 (12%), Positives = 27/83 (32%), Gaps = 5/83 (6%) Query: 162 SVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 +V + + N L+ S + G LE S+ + E+ M+ Sbjct: 332 NVASPDNLTAISGNVFATNKESGDLQLGTANSGSLGKIVSGALEKSSVDLASELTTMVEA 391 Query: 217 TQKFNSITTLIDENEKSMLEAIR 239 + + + + + + + + Sbjct: 392 QRSYTANSKVFQTGTELLDVLVN 414 >gi|92116886|ref|YP_576615.1| flagellar basal body FlaE [Nitrobacter hamburgensis X14] gi|91799780|gb|ABE62155.1| flagellar basal body FlaE [Nitrobacter hamburgensis X14] Length = 615 Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 56/139 (40%), Gaps = 11/139 (7%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + N + A L ++ N++N T G++ I FS+++ Q V + Sbjct: 6 ALNTSVGGLQAQSFALQNISGNIANAQTTGYKGITTAFSDLIPDSTAPNRQVAGGVTAYA 65 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRG-----------IILTRDGRFKVTDDG 112 G+ ++ A+ GD +F +++P G TR G F+V +G Sbjct: 66 TATISSQGTVSASTVGTYMAITGDGFFNVQAPTGRVDNQPQFSGVTYYTRRGDFQVNANG 125 Query: 113 SLVSASGKYPVLDMASVPI 131 +LV+++G Y + Sbjct: 126 NLVNSAGYYLMGVPVDPKT 144 Score = 68.0 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 12/88 (13%), Positives = 31/88 (35%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMI 214 +A + L + + + + P + + LE SN + E ++I Sbjct: 528 LAKVSLSHFNGTNYLKALDGGAYAVTDESGPAIAGAAGHINGSSLEGSNTDIADEFTKLI 587 Query: 215 HLTQKFNSITTLIDENEKSMLEAIRNIA 242 Q +++ T +I + + + + Sbjct: 588 VTQQAYSANTKVITTANSMVQDLLNVLR 615 >gi|213616339|ref|ZP_03372165.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 187 Score = 76.8 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 67/182 (36%), Gaps = 6/182 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SF+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 SFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ +LV+ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGMQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q+ K T + S V + + Sbjct: 117 TGYPATGTPPTIQQGANPAPITIPNTLMAAKSTTTASMQINLNSTDPVPSKTPFSVSDAD 176 Query: 183 PT 184 Sbjct: 177 SY 178 >gi|187478185|ref|YP_786209.1| flagellar hook protein [Bordetella avium 197N] gi|115422771|emb|CAJ49299.1| flagellar hook protein [Bordetella avium 197N] Length = 406 Score = 76.8 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 30/195 (15%), Positives = 62/195 (31%), Gaps = 7/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 F GL+ A Q L + +N++N+ T+GF++ F++V + V Sbjct: 2 GFGQGLSGLQAASQNLDVIGNNIANSGTIGFKSGSTSFADVYAN-----SRVGLGVKVAA 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESP--RGIILTRDGRFKVTDDGSLVSASGKY 121 G+ TG E D A++G F + I+ TR G F + + + +A G Sbjct: 57 VNQRFTAGTVSGTGGEYDIAIDGAKGFFRVTDASDNIVYTRSGEFGIDKNFFITNAMGYR 116 Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 ++ + + + + + + + + Sbjct: 117 LTGYPVGGIGTNLVPLQVPQANIAPQETNAASIQTNLNANAKIVPAAPAFDPANQDTYTD 176 Query: 182 PPTPLEDLSGVTVKR 196 S + Sbjct: 177 LVPTTIYDSLGNSHQ 191 Score = 73.0 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 19/140 (13%), Positives = 37/140 (26%), Gaps = 5/140 (3%) Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 R + S G + S E + + + + T+ L + + Sbjct: 265 RMNYQNVTHFGSDFGPKVTANGYSSGEFSGISIEKNGTIMAKYTNGESQAVGTIALANFN 324 Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQK 219 G +S T + LE SN E+ MI + Sbjct: 325 NVGGLKPVGDSSWVETGESGQAIMGQPGTNGLATLFGQALEQSNVEMSQELVNMIVAQRT 384 Query: 220 FNSITTLIDENEKSMLEAIR 239 + + I ++ + I Sbjct: 385 YQANAQTIKTQDEVLQVLIN 404 >gi|218700421|ref|YP_002408050.1| flagellar hook protein FlgE [Escherichia coli IAI39] gi|218370407|emb|CAR18214.1| flagellar hook protein [Escherichia coli IAI39] Length = 400 Score = 76.8 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 72/195 (36%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ +LV+ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q+ K T + S + + + N Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPSVKAFDASNAD 176 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 177 SYNKKGSVTVFDSQG 191 Score = 72.6 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 17/115 (14%), Positives = 37/115 (32%), Gaps = 5/115 (4%) Query: 130 PIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT----- 184 P + + G S + + + L + ++G ++ S Sbjct: 284 PGDLVSYQINDDGTVVGNYSNEQTQLLGIVLANFANNEGLASEGDNVWSATQSSGVALLG 343 Query: 185 PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + T+ G LE SN + E+ MI + + S I ++ + + Sbjct: 344 TAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 398 >gi|289523565|ref|ZP_06440419.1| flagellar hook protein FlgE [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503257|gb|EFD24421.1| flagellar hook protein FlgE [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 618 Score = 76.8 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 32/191 (16%), Positives = 63/191 (32%), Gaps = 16/191 (8%) Query: 19 LSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL------------ 66 L V +N++N +T+GF+ V F +++ + Sbjct: 2 LDVVGNNIANVNTMGFKKSTVTFQDLLYETSKGATAPRENIGGVNPMQIGLGTTVAAVET 61 Query: 67 SKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDM 126 G TG D A++GD ++ L + +R G F + +G++V + Y ++ Sbjct: 62 IHSQGPLQYTGNRTDVAIQGDGYYVLNDGAQNVYSRAGNFVLDGNGNIVQSGTGYTLMGY 121 Query: 127 ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPL 186 P + G+ ++ G + G +S + +P Sbjct: 122 KMSPDPQNPTQYVRGTQLVALNIPVGQKLSAKGTEVL----GLQCNLDSRVDTYLPMGIT 177 Query: 187 EDLSGVTVKRG 197 TV G Sbjct: 178 NPNFSTTVAIG 188 Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 15/123 (12%), Positives = 38/123 (30%), Gaps = 5/123 (4%) Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 D + + + + + T+ L G + + P Sbjct: 493 YYQDGYQMGVLQDFSIASDGTVMGIYSNGRNSALYTLSLALFSNPSGLEKIGMTAFIPTA 552 Query: 182 PP-----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 ++ ++ G LE +N + E ++I + F + +I +++ + E Sbjct: 553 NSGLPQVVTPKEGGAGSLAGGNLEMANVDLAEEFSRLIIAQRGFQANARVITTSDQVLDE 612 Query: 237 AIR 239 I Sbjct: 613 LIN 615 >gi|289612840|emb|CBI60006.1| unnamed protein product [Sordaria macrospora] Length = 135 Score = 76.8 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 30/129 (23%), Positives = 50/129 (38%), Gaps = 10/129 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + A + RL A N++N T G++ ++ F++ V A Sbjct: 3 MTGLVDSATAVMRMAQARLDVAAHNIANVATPGYKR-RIGFADTVAARSE---------V 52 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + + S TG LD A+ GD +F + + TR G+F+ DG+LV+ G Sbjct: 53 ALATRIDAAQASLTETGNVLDMAISGDGYFRVRDGERTLYTRQGQFRRDADGALVTPQGY 112 Query: 121 YPVLDMASV 129 Sbjct: 113 VLQQSGGGD 121 >gi|331646334|ref|ZP_08347437.1| flagellar hook protein FlgE [Escherichia coli M605] gi|330910890|gb|EGH39400.1| flagellar hook protein FlgE [Escherichia coli AA86] gi|331045086|gb|EGI17213.1| flagellar hook protein FlgE [Escherichia coli M605] Length = 401 Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 34/195 (17%), Positives = 73/195 (37%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ +LV+ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q+ K T + S + N+ + N Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQLNLNSSDPLPSVNAFDASNAD 176 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 177 SYNKKGSVTVFDSQG 191 Score = 72.6 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + + + +++ +++ + L + ++G ++ S Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 337 Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + T+ G LE SN + E+ MI + + S I ++ + Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397 Query: 238 IR 239 + Sbjct: 398 VN 399 >gi|170683341|ref|YP_001744104.1| flagellar hook protein FlgE [Escherichia coli SMS-3-5] gi|300938641|ref|ZP_07153370.1| flagellar hook protein FlgE [Escherichia coli MS 21-1] gi|170521059|gb|ACB19237.1| flagellar hook protein FlgE [Escherichia coli SMS-3-5] gi|300456426|gb|EFK19919.1| flagellar hook protein FlgE [Escherichia coli MS 21-1] Length = 401 Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 72/195 (36%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ +LV+ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q+ K T + S + + + N Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPSVKAFDASNAD 176 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 177 SYNKKGSVTVFDSQG 191 Score = 73.4 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + + + +++ +++ + L + ++G ++ S Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 337 Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + T+ G LE SN + E+ MI + + S I ++ + Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397 Query: 238 IR 239 + Sbjct: 398 VN 399 >gi|118588735|ref|ZP_01546143.1| hypothetical protein SIAM614_18554 [Stappia aggregata IAM 12614] gi|118438721|gb|EAV45354.1| hypothetical protein SIAM614_18554 [Stappia aggregata IAM 12614] Length = 463 Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 36/218 (16%), Positives = 71/218 (32%), Gaps = 25/218 (11%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA-SG 62 + N ++ A + L ++ N++N+ T G++ + FS++V + Q++S + Sbjct: 6 AINSAVSGLAAQAKALENISGNVANSQTTGYKRLDTTFSDLVSGGGSKQAQQVSGTTFAT 65 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWF-----------ALESPRGIILTRDGRFKVTDD 111 + G S + A+ G +F + TR G F+ + Sbjct: 66 SRATNTVQGDITSVDVDTYMAINGPGYFVVTKASDVVDGSTTFADETYYTRAGDFERDKE 125 Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171 G L+++SG Y + I + + +A +VD R Sbjct: 126 GYLINSSGYYLQG------FPLDPNTGNAIGDNPTVIQIENQPLAASATTAVDYQANLPR 179 Query: 172 RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYE 209 + + TV G N E Sbjct: 180 VPATNDYDGTDESTALL--NATVGAG-----NVAVANE 210 Score = 66.8 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 12/96 (12%), Positives = 39/96 (40%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANS 206 + + + + + L + Q R + + + + G + +E SNA+ Sbjct: 368 YSNNQQRPVYQIPLATFQAEQDLQRVDGAAFAATAGSGDADLSGGGQILAKKVELSNADI 427 Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 E ++I Q +++ + ++ ++ + +A+ + Sbjct: 428 ADEFSKLIITQQAYSANSRIVTSADEMLDDALNMVR 463 >gi|281178185|dbj|BAI54515.1| flagellar hook protein FlgE [Escherichia coli SE15] Length = 401 Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 34/195 (17%), Positives = 73/195 (37%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ +LV+ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q+ K T + S + N+ + N Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDSLPSVNAFDASNAD 176 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 177 SYNKKGSVTVFDSQG 191 Score = 73.0 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + + + +++ +++ + L + ++G ++ S Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 337 Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + T+ G LE SN + E+ MI + + S I ++ + Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397 Query: 238 IR 239 + Sbjct: 398 VN 399 >gi|26247216|ref|NP_753256.1| flagellar hook protein FlgE [Escherichia coli CFT073] gi|227886566|ref|ZP_04004371.1| flagellar hook protein FlgE [Escherichia coli 83972] gi|300974380|ref|ZP_07172592.1| flagellar hook protein FlgE [Escherichia coli MS 45-1] gi|26107617|gb|AAN79816.1|AE016759_90 Flagellar hook protein flgE [Escherichia coli CFT073] gi|227836770|gb|EEJ47236.1| flagellar hook protein FlgE [Escherichia coli 83972] gi|300410623|gb|EFJ94161.1| flagellar hook protein FlgE [Escherichia coli MS 45-1] gi|307553078|gb|ADN45853.1| flagellar hook protein FlgE [Escherichia coli ABU 83972] gi|315291070|gb|EFU50433.1| flagellar hook protein FlgE [Escherichia coli MS 153-1] Length = 401 Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 34/195 (17%), Positives = 73/195 (37%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ +LV+ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q+ K T + S + N+ + N Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDSLPSVNAFDASNAD 176 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 177 SYNKKGSVTVFDSQG 191 Score = 73.0 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + + + +++ +++ + L + ++G ++ S Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 337 Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + T+ G LE SN + E+ MI + + S I ++ + Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397 Query: 238 IR 239 + Sbjct: 398 VN 399 >gi|168764488|ref|ZP_02789495.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4501] gi|189365520|gb|EDU83936.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4501] Length = 401 Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 72/195 (36%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ + V+ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNQVNMQGLQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q+ K T + S + N+ + N Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPSVNAFDASNAD 176 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 177 SYNKKGSVTVFDSQG 191 Score = 72.2 bits (175), Expect = 6e-11, Method: Composition-based stats. Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + + + +++ +++ + L + ++G ++ S Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 337 Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + T+ G LE SN + E+ MI + + S I ++ + Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397 Query: 238 IR 239 + Sbjct: 398 VN 399 >gi|54294163|ref|YP_126578.1| flagellar hook protein FlgE [Legionella pneumophila str. Lens] gi|53753995|emb|CAH15466.1| Flagellar hook protein FlgE [Legionella pneumophila str. Lens] gi|307609977|emb|CBW99506.1| flagellar hook protein FlgE [Legionella pneumophila 130b] Length = 437 Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 29/122 (23%), Positives = 60/122 (49%), Gaps = 2/122 (1%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV--GAIKNDIDQKISFVASG 62 FN L+ A + L + +N++N+ T+GF+ + +F+++ A + + V Sbjct: 3 FNTALSGIQASTRDLEVIGNNIANSATIGFKGSRAEFADIYSSSAYGSGGNAVGGGVKLS 62 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 + + S G+ ++ LD A+ G +F L I TR G+FK+ ++ +V+A+ + Sbjct: 63 RVHQSFATGTLSTSNNTLDLAVNGSGFFILSDQGAKIYTRAGQFKLNNENYIVNANNQRL 122 Query: 123 VL 124 Sbjct: 123 TG 124 Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 12/98 (12%), Positives = 31/98 (31%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLED 201 + + + + L + + N+ + + + + G LE+ Sbjct: 338 YTNGQSLAMGQIQLANFADPESLQNIGNTSWAETTSSGQPLVSAPGSGGLGLINSGRLEE 397 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ ++I + F + I + I Sbjct: 398 SNVDLTGELVKLISAQRNFQANAQTIRTGDAITQTIIN 435 >gi|300722682|ref|YP_003711972.1| flagellar hook protein [Xenorhabdus nematophila ATCC 19061] gi|139522504|gb|ABO77656.1| FlgE [Xenorhabdus nematophila] gi|297629189|emb|CBJ89785.1| flagellar biosynthesis; hook protein [Xenorhabdus nematophila ATCC 19061] Length = 398 Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 15/124 (12%), Positives = 40/124 (32%), Gaps = 5/124 (4%) Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 P D + + + + + +V+ + L + +G + ++ + + Sbjct: 273 PPKQDGYAAGHFTDYRVDDDGKIYGVYSNDQKQVLGQIVLANFANPEGLAAQGDNVWAES 332 Query: 181 IPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 + + G LE SN + E+ MI + + S I ++ + Sbjct: 333 GASGSSVIGVAGSGNLGNLISGALEASNVDMSQELVNMIVSQRNYQSNAQTIKTQDQILQ 392 Query: 236 EAIR 239 + Sbjct: 393 TLVS 396 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 57/124 (45%), Gaps = 6/124 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SF+ ++ A L + +N+SN+ T GF++ F++V + V Sbjct: 2 SFSQAVSGLNAAASNLDVIGNNISNSATFGFKSSSAAFADVFS-----GSEVGLGVKVSG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASGKYP 122 + + GS +T +LD A+ +F ++ I+ +R+G+FK+ +D +L++ G Sbjct: 57 MVQNFKDGSTTTTNRKLDMAINQGGFFRMQDSNGNILYSRNGQFKMDEDRNLINMQGMKL 116 Query: 123 VLDM 126 Sbjct: 117 TGYP 120 >gi|209773380|gb|ACI85002.1| flagellar hook protein FlgE [Escherichia coli] Length = 401 Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 34/195 (17%), Positives = 73/195 (37%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ +LV+ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q+ K T + S + N+ + N Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPSVNAFDASNAD 176 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 177 SYNKKGSVTVFDSQG 191 Score = 72.6 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + + + +++ +++ + L + ++G ++ S Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 337 Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + T+ G LE SN + E+ MI + + S I ++ + Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397 Query: 238 IR 239 + Sbjct: 398 VN 399 >gi|15801193|ref|NP_287210.1| flagellar hook protein FlgE [Escherichia coli O157:H7 EDL933] gi|15830708|ref|NP_309481.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. Sakai] gi|168747148|ref|ZP_02772170.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4113] gi|168758631|ref|ZP_02783638.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4401] gi|168767735|ref|ZP_02792742.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4486] gi|168773921|ref|ZP_02798928.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4196] gi|168783606|ref|ZP_02808613.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4076] gi|168790011|ref|ZP_02815018.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC869] gi|168802021|ref|ZP_02827028.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC508] gi|195935466|ref|ZP_03080848.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4024] gi|208809224|ref|ZP_03251561.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4206] gi|208814886|ref|ZP_03256065.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4045] gi|208822570|ref|ZP_03262889.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4042] gi|209395987|ref|YP_002269922.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4115] gi|254792458|ref|YP_003077295.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. TW14359] gi|261227019|ref|ZP_05941300.1| flagellar hook protein [Escherichia coli O157:H7 str. FRIK2000] gi|261256253|ref|ZP_05948786.1| flagellar hook protein [Escherichia coli O157:H7 str. FRIK966] gi|291282096|ref|YP_003498914.1| Flagellar hook protein FlgE [Escherichia coli O55:H7 str. CB9615] gi|12514614|gb|AAG55822.1|AE005317_11 flagellar biosynthesis, hook protein [Escherichia coli O157:H7 str. EDL933] gi|13360918|dbj|BAB34877.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. Sakai] gi|187770405|gb|EDU34249.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4196] gi|188018069|gb|EDU56191.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4113] gi|188999079|gb|EDU68065.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4076] gi|189354568|gb|EDU72987.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4401] gi|189363151|gb|EDU81570.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4486] gi|189370482|gb|EDU88898.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC869] gi|189375951|gb|EDU94367.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC508] gi|208729025|gb|EDZ78626.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4206] gi|208731534|gb|EDZ80222.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4045] gi|208738055|gb|EDZ85738.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4042] gi|209157387|gb|ACI34820.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4115] gi|209773378|gb|ACI85001.1| flagellar hook protein FlgE [Escherichia coli] gi|209773382|gb|ACI85003.1| flagellar hook protein FlgE [Escherichia coli] gi|209773384|gb|ACI85004.1| flagellar hook protein FlgE [Escherichia coli] gi|209773386|gb|ACI85005.1| flagellar hook protein FlgE [Escherichia coli] gi|254591858|gb|ACT71219.1| flagellar hook protein [Escherichia coli O157:H7 str. TW14359] gi|290761969|gb|ADD55930.1| Flagellar hook protein FlgE [Escherichia coli O55:H7 str. CB9615] gi|320189759|gb|EFW64415.1| Flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC1212] gi|320637527|gb|EFX07327.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. G5101] gi|320643088|gb|EFX12289.1| flagellar hook protein FlgE [Escherichia coli O157:H- str. 493-89] gi|320648546|gb|EFX17201.1| flagellar hook protein FlgE [Escherichia coli O157:H- str. H 2687] gi|320653860|gb|EFX21934.1| flagellar hook protein FlgE [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320659340|gb|EFX26909.1| flagellar hook protein FlgE [Escherichia coli O55:H7 str. USDA 5905] gi|320664475|gb|EFX31626.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. LSU-61] gi|326339298|gb|EGD63112.1| Flagellar hook protein FlgE [Escherichia coli O157:H7 str. 1125] gi|326344741|gb|EGD68489.1| Flagellar hook protein FlgE [Escherichia coli O157:H7 str. 1044] Length = 401 Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 34/195 (17%), Positives = 73/195 (37%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ +LV+ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q+ K T + S + N+ + N Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPSVNAFDASNAD 176 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 177 SYNKKGSVTVFDSQG 191 Score = 72.6 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + + + +++ +++ + L + ++G ++ S Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 337 Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + T+ G LE SN + E+ MI + + S I ++ + Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397 Query: 238 IR 239 + Sbjct: 398 VN 399 >gi|149203100|ref|ZP_01880071.1| flagellar hook protein FlgE, putative [Roseovarius sp. TM1035] gi|149143646|gb|EDM31682.1| flagellar hook protein FlgE, putative [Roseovarius sp. TM1035] Length = 433 Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 37/165 (22%), Positives = 68/165 (41%), Gaps = 10/165 (6%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 +S N +A A RL+T++DN++N+ T G+R ++ F VV A V +G Sbjct: 5 SSLNASVAGLNANATRLATISDNIANSSTFGYRRVEADFESVVIA-GRGGSYAAGGVRAG 63 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFAL---------ESPRGIILTRDGRFKVTDDGS 113 + L + G+ +S+ D A+ + + ++LT G F+ G Sbjct: 64 TQRLIDQGGAIVSSSNPTDLAVRDRGFLPVARVTDLVVGNGDPRMLLTTTGSFRADPQGR 123 Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158 LV+ SG + A+ IP+ + G + ++ Sbjct: 124 LVTESGLVLLGWPANPDGTIPEFSRDTSTGLEPVQINVNQLTGEP 168 Score = 68.0 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 14/123 (11%), Positives = 36/123 (29%), Gaps = 5/123 (4%) Query: 125 DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP- 183 D + V + + +++ + L + G V + P+ Sbjct: 311 DGSPVGNMTSANVDANGFVRATFDTGVSRIVYQVPLVDLPNPNGMVSMDQQTYLPSTDSG 370 Query: 184 ----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + ++S + E+ MI + ++S +I ++ + E Sbjct: 371 SFFLWDAGAGPTGDIVAFARQESATDVAGELTDMIQTQRAYSSNAKVIQTVDEMLQETTN 430 Query: 240 NIA 242 I Sbjct: 431 IIR 433 >gi|331682578|ref|ZP_08383197.1| flagellar hook protein FlgE [Escherichia coli H299] gi|331080209|gb|EGI51388.1| flagellar hook protein FlgE [Escherichia coli H299] Length = 401 Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 34/195 (17%), Positives = 73/195 (37%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ +LV+ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q+ K T + S + N+ + N Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPSVNAFDASNAD 176 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 177 SYNKKGSVTVFDSQG 191 Score = 72.6 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + + + +++ +++ + L + ++G ++ S Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 337 Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + T+ G LE SN + E+ MI + + S I ++ + Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397 Query: 238 IR 239 + Sbjct: 398 VN 399 >gi|331672596|ref|ZP_08373385.1| flagellar hook protein FlgE [Escherichia coli TA280] gi|331070239|gb|EGI41605.1| flagellar hook protein FlgE [Escherichia coli TA280] Length = 401 Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 34/195 (17%), Positives = 73/195 (37%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ +LV+ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q+ K T + S + N+ + N Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPSVNAFDASNAD 176 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 177 SYNKKGSVTVFDSQG 191 Score = 72.6 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + + + +++ +++ + L + ++G ++ S Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 337 Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + T+ G LE SN + E+ MI + + S I ++ + Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397 Query: 238 IR 239 + Sbjct: 398 VN 399 >gi|194432446|ref|ZP_03064733.1| flagellar hook protein FlgE [Shigella dysenteriae 1012] gi|194419333|gb|EDX35415.1| flagellar hook protein FlgE [Shigella dysenteriae 1012] gi|332092817|gb|EGI97885.1| flagellar hook protein flgE [Shigella dysenteriae 155-74] Length = 401 Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 34/195 (17%), Positives = 73/195 (37%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ +LV+ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q+ K T + S + N+ + N Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPSVNAFDASNAD 176 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 177 SYNKKGSVTVFDSQG 191 Score = 73.0 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 14/122 (11%), Positives = 40/122 (32%), Gaps = 5/122 (4%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + + + +++ +++ + L + ++G + ++ S Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASKGDNVWSATQS 337 Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + T+ G LE SN + E+ MI + + S I ++ + Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397 Query: 238 IR 239 + Sbjct: 398 VN 399 >gi|320179224|gb|EFW54182.1| Flagellar hook protein FlgE [Shigella boydii ATCC 9905] Length = 389 Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 34/195 (17%), Positives = 73/195 (37%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ +LV+ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q+ K T + S + N+ + N Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPSVNAFDASNAD 176 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 177 SYNKKGSVTVFDSQG 191 Score = 63.0 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 14/112 (12%), Positives = 35/112 (31%), Gaps = 5/112 (4%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + + + +++ +++ + L + ++G ++ S Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 337 Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 + T+ G LE SN + E+ MI + + S I Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKT 389 >gi|293409442|ref|ZP_06653018.1| flgE [Escherichia coli B354] gi|291469910|gb|EFF12394.1| flgE [Escherichia coli B354] Length = 401 Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 34/195 (17%), Positives = 73/195 (37%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F + +S + +R+G+FK+ ++ +LV+ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRMVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q+ K T + S + N+ + N Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPSVNAFDASNAD 176 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 177 SYNKKGSVTVFDSQG 191 Score = 72.2 bits (175), Expect = 6e-11, Method: Composition-based stats. Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + + + +++ +++ + L + ++G ++ S Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 337 Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + T+ G LE SN + E+ MI + + S I ++ + Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397 Query: 238 IR 239 + Sbjct: 398 VN 399 >gi|33601541|ref|NP_889101.1| flagellar hook protein FlgE [Bordetella bronchiseptica RB50] gi|33575977|emb|CAE33056.1| flagellar hook protein FlgE [Bordetella bronchiseptica RB50] Length = 473 Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 30/128 (23%), Positives = 53/128 (41%), Gaps = 7/128 (5%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 F L+ A Q L + +N++N+ TVGF++ F++V + + V Sbjct: 2 GFGQALSGLNAASQNLDVIGNNIANSGTVGFKSGAASFADVYAS-----SRVGLGVKVSA 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRG--IILTRDGRFKVTDDGSLVSASGKY 121 VG+ T E D A++G F + + + +R+G F V + +V+A G Sbjct: 57 INQRFTVGNISMTNGEYDMAIDGGKGFFRLTDQSGGVFYSRNGEFMVDKNFYVVNAQGFR 116 Query: 122 PVLDMASV 129 A Sbjct: 117 LTGYPAGA 124 Score = 75.3 bits (183), Expect = 7e-12, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 32/98 (32%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLED 201 + + + I T+ L + + QG N+ + T + LE Sbjct: 374 YTNGETQTIGTVVLANFNNVQGLKPVGNNAWAETSESGQATLGQPGTNGLATIVGQALEG 433 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ MI + + + I + M + Sbjct: 434 SNVDLSSELVNMIVAQRTYQANAQTIQTQNEVMQVLMN 471 >gi|323190588|gb|EFZ75860.1| flagellar hook protein flgE [Escherichia coli RN587/1] Length = 401 Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 34/195 (17%), Positives = 73/195 (37%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 AFSQAVSGLNAAATNLDIIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ +LV+ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q+ K T + S + N+ + N Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPSVNAFDASNAD 176 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 177 SYNKKGSVTVFDSQG 191 Score = 73.4 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + + + +++ +++ + L + ++G ++ S Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 337 Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + T+ G LE SN + E+ MI + + S I ++ + Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397 Query: 238 IR 239 + Sbjct: 398 VN 399 >gi|83576781|gb|ABC23332.1| conserved hypothetical protein [Rhodospirillum rubrum ATCC 11170] Length = 472 Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 53/124 (42%), Gaps = 3/124 (2%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65 N+ ++A A +S +++N++N+ T+G++T F +V + + + V + Sbjct: 21 NVAVSAMNAQSSSVSAISNNLANSSTIGYKTSNASFYSLVTGTGSTSNFTGAGVVASATQ 80 Query: 66 LSKEVGSFISTGTELDFALEGDAWFALES---PRGIILTRDGRFKVTDDGSLVSASGKYP 122 G + T D A++G F + + TR G F DG LV+++ Y Sbjct: 81 NVINQGVIVGTQNVTDLAVDGKGMFIVTDRSGSNELYYTRAGDFYPNADGDLVNSNNYYL 140 Query: 123 VLDM 126 Sbjct: 141 QGYP 144 >gi|315296707|gb|EFU56002.1| flagellar hook protein FlgE [Escherichia coli MS 16-3] gi|320196442|gb|EFW71065.1| Flagellar hook protein FlgE [Escherichia coli WV_060327] Length = 401 Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 34/195 (17%), Positives = 73/195 (37%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ +LV+ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q+ K T + S + N+ + N Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPSVNTFDASNAD 176 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 177 SYNKKGSVTVFDSQG 191 Score = 72.2 bits (175), Expect = 6e-11, Method: Composition-based stats. Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + + + +++ +++ + L + ++G ++ S Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 337 Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + T+ G LE SN + E+ MI + + S I ++ + Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397 Query: 238 IR 239 + Sbjct: 398 VN 399 >gi|299066542|emb|CBJ37732.1| Putative flagellar hook protein (flgE) [Ralstonia solanacearum CMR15] Length = 395 Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 32/133 (24%), Positives = 62/133 (46%), Gaps = 9/133 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--------I 52 M S I + E+ L ++++ +N +T GF+ ++FS++ Sbjct: 1 MLDSIYIAMTGLHGYEEALRVISNDTTNMNTPGFKGSALQFSDLFYTNSGQSAQGGGHTA 60 Query: 53 DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDD 111 Q + + L+ + G +TG +LD A++G F L++ + TRDG+FK D Sbjct: 61 SQLGFGLNTVGTLLNFKQGQMQTTGNDLDVAVDGQGLFVLKAADGSLRYTRDGQFKFNTD 120 Query: 112 GSLVSASGKYPVL 124 G+L+S++ + Sbjct: 121 GNLISSTTGEQAM 133 Score = 59.9 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 12/100 (12%), Positives = 34/100 (34%), Gaps = 5/100 (5%) Query: 138 EIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRG 197 KG G+ + + +V ++ F + + T+ G Sbjct: 295 YANGQTVKGAQLALGRFNSPDAVEAVGNNE-FKVVNGQAWETGVAG----TGAFGTLHSG 349 Query: 198 FLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 +E+SN + E ++ + + + + + ++ + E Sbjct: 350 MVENSNVDLSQEFSNLVIMQRGYQASSQVVSTANDMLSEL 389 >gi|254699461|ref|ZP_05161289.1| flagellar basal body rod protein FlgG [Brucella suis bv. 5 str. 513] gi|261749912|ref|ZP_05993621.1| predicted protein [Brucella suis bv. 5 str. 513] gi|261739665|gb|EEY27591.1| predicted protein [Brucella suis bv. 5 str. 513] Length = 77 Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 11/52 (21%), Positives = 26/52 (50%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 + I A + L +A+N++N +T GF+ + +F++++ + D Sbjct: 1 MKALTIAATGMNAQQLNLEVIANNIANINTTGFKRARAEFTDLLYQSERTAD 52 >gi|222032829|emb|CAP75568.1| flagellar hook protein flgE [Escherichia coli LF82] gi|312945638|gb|ADR26465.1| flagellar hook protein FlgE [Escherichia coli O83:H1 str. NRG 857C] Length = 401 Score = 76.4 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 34/195 (17%), Positives = 73/195 (37%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ +LV+ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q+ K T + S + N+ + N Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPSVNAFDASNAD 176 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 177 SYNKKGSVTVFDSQG 191 Score = 72.2 bits (175), Expect = 6e-11, Method: Composition-based stats. Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + + + +++ +++ + L + ++G ++ S Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 337 Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + T+ G LE SN + E+ MI + + S I ++ + Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397 Query: 238 IR 239 + Sbjct: 398 VN 399 >gi|218704484|ref|YP_002412003.1| flagellar hook protein FlgE [Escherichia coli UMN026] gi|293404360|ref|ZP_06648354.1| flgE [Escherichia coli FVEC1412] gi|298380140|ref|ZP_06989745.1| flagellar hook protein FlgE [Escherichia coli FVEC1302] gi|300899595|ref|ZP_07117834.1| flagellar hook protein FlgE [Escherichia coli MS 198-1] gi|218431581|emb|CAR12460.1| flagellar hook protein [Escherichia coli UMN026] gi|291428946|gb|EFF01971.1| flgE [Escherichia coli FVEC1412] gi|298279838|gb|EFI21346.1| flagellar hook protein FlgE [Escherichia coli FVEC1302] gi|300356866|gb|EFJ72736.1| flagellar hook protein FlgE [Escherichia coli MS 198-1] Length = 401 Score = 76.4 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 34/195 (17%), Positives = 73/195 (37%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ +LV+ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q+ K T + S + N+ + N Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPSVNAFDASNAD 176 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 177 SYNKKGSVTVFDSQG 191 Score = 72.2 bits (175), Expect = 6e-11, Method: Composition-based stats. Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + + + +++ +++ + L + ++G ++ S Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 337 Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + T+ G LE SN + E+ MI + + S I ++ + Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397 Query: 238 IR 239 + Sbjct: 398 VN 399 >gi|317492428|ref|ZP_07950857.1| fagellar hook-basal body protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919767|gb|EFV41097.1| fagellar hook-basal body protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 414 Score = 76.1 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 19/145 (13%), Positives = 41/145 (28%), Gaps = 9/145 (6%) Query: 100 LTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG 159 LT G + V+A + QI I + +++ Sbjct: 272 LTFTGSMQQNTGKDGVTAKSQDGYAAGEMTGYQINDDGTITGTYSNQQTQLLAQIV---- 327 Query: 160 LYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMI 214 + + +G N+ + + G +E SN + E+ MI Sbjct: 328 MANFANPEGLQSEGNNMWKESATSGQAIVGVAGASGLGALTSGAVEASNVDLSKELVNMI 387 Query: 215 HLTQKFNSITTLIDENEKSMLEAIR 239 + + S I ++ + + Sbjct: 388 VAQRNYQSNAQTIKTQDQILQTLVN 412 Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 30/134 (22%), Positives = 57/134 (42%), Gaps = 6/134 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 FN ++ A L + +N++N+ TVGF++ V F+++ + V Sbjct: 2 GFNQAVSGLNAAASNLDVIGNNIANSQTVGFKSGSVTFADMFA-----GSKVGLGVKVAS 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASGKYP 122 G +T LD A+ G+ +F ++ G+ +R+G+F D L +A G + Sbjct: 57 VQQDFTDGITTTTNRGLDVAISGNGFFRMQDANGGVYYSRNGQFTKNQDNFLTNAQGVFL 116 Query: 123 VLDMASVPIQIPQK 136 A+ Q+ Sbjct: 117 TGYPAAGSPPTIQQ 130 >gi|331657138|ref|ZP_08358100.1| flagellar hook protein FlgE [Escherichia coli TA206] gi|331055386|gb|EGI27395.1| flagellar hook protein FlgE [Escherichia coli TA206] Length = 401 Score = 76.1 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 34/195 (17%), Positives = 73/195 (37%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ +LV+ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q+ K T + S + N+ + N Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDSLPSVNAFDASNAD 176 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 177 SYNKKGSVTVFDSQG 191 Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + + + +++ +++ + L + ++G ++ S Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 337 Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + T+ G LE SN + E+ MI + + S I ++ + Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397 Query: 238 IR 239 + Sbjct: 398 VN 399 >gi|323191538|gb|EFZ76799.1| flgE [Escherichia coli RN587/1] Length = 400 Score = 76.1 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 40/187 (21%), Positives = 69/187 (36%), Gaps = 6/187 (3%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66 I A+ ++L +++N++N TVG++++ +FS + Q + +G Sbjct: 5 IAATGLNAVNEQLDGISNNIANAGTVGYKSMTTQFSAMYA-----GSQAMGVSVAGTAQS 59 Query: 67 SKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125 GS +STG LD A+ D +F +S I TR G F+ +G +V+ASG Y Sbjct: 60 ISRGGSLVSTGNALDLAINNDGFFVTCDSAGNISYTRAGSFETDKNGYIVNASGDYLQGY 119 Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185 + + G I + T R + N Sbjct: 120 PVDDSGTLQTGTVTDIQIKTGNIPAQASSSLTFTANFDASDDAIDRTTVPFDATNSSSYT 179 Query: 186 LEDLSGV 192 + V Sbjct: 180 DSYTTTV 186 Score = 68.4 bits (165), Expect = 8e-10, Method: Composition-based stats. Identities = 25/194 (12%), Positives = 55/194 (28%), Gaps = 10/194 (5%) Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113 Q + + +TG F ++ I LT D Sbjct: 211 QYTFDGQQQTGVPATTLTFDPNTGKLTSPTTPQTIEFQTDAAAPIDLTVDYSTCTQYGSD 270 Query: 114 L-VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172 V+ + +Q+ +++ GE +G+V+ L + G Sbjct: 271 FSVTTNAANGYASATQNGVQVDDDGKVYATYSNGERMLQGQVV----LATFPNENGLEAV 326 Query: 173 ENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 + T+ G LE SN + E+ ++ + + + T +I Sbjct: 327 SGTAWVQTGESGTPLIGVPGSGTCGTLSSGVLESSNVDITSELVNLMTAQRNYQANTKVI 386 Query: 228 DENEKSMLEAIRNI 241 + + + + Sbjct: 387 ATSTQLDDALFQAM 400 >gi|188580157|ref|YP_001923602.1| hypothetical protein Mpop_0889 [Methylobacterium populi BJ001] gi|179343655|gb|ACB79067.1| protein of unknown function DUF1078 domain protein [Methylobacterium populi BJ001] Length = 460 Score = 76.1 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 38/216 (17%), Positives = 71/216 (32%), Gaps = 14/216 (6%) Query: 1 MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 M ++ ++ A LS ++ N++N+ T G++ I F +++ + Q Sbjct: 1 MDVFSALQTAVSGLKAQSFSLSNISGNIANSQTTGYKRIDTSFVDML-VDGDARSQTAGS 59 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-----------LTRDGRFK 107 VA+ E + G+ +STG + AL+G +F + TR G F Sbjct: 60 VAAFSELTNSVQGNKVSTGVSTNMALDGQGFFVVRKKTTDAGGAESFSNANLFTRRGDFA 119 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 DG LV+ +G Y V + ++ I + Sbjct: 120 PDKDGYLVNGAGAYLVGASLDPVTGQTTGTGPIKISNAIIPAKPTTTITYSANLPKSPAT 179 Query: 168 GFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSN 203 +S T G + ++N Sbjct: 180 TNAASTGGLLSAFSDGTDPRVTPANGATTGTVSEAN 215 Score = 62.6 bits (150), Expect = 5e-08, Method: Composition-based stats. Identities = 19/137 (13%), Positives = 42/137 (30%), Gaps = 3/137 (2%) Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 + V+ + + + D G+ S G +A + + Sbjct: 326 QYAAASGTVTTNDLKQNGYASGSLNSVEVGDNGLISGKYSNGSVIG--LARVEVAQFVNP 383 Query: 167 QGFVRRE-NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225 G + + L TV +E SN + E +MI Q +++ T Sbjct: 384 DGLKPDSLGNYEQTVASGEAINGLKDSTVVGANVEQSNTDIAAEFSKMIVTQQAYSANTR 443 Query: 226 LIDENEKSMLEAIRNIA 242 ++ + + + + I Sbjct: 444 VMSTAQTMISDLLNVIR 460 >gi|187926954|ref|YP_001893299.1| flagellar basal body FlaE domain protein [Ralstonia pickettii 12J] gi|241665283|ref|YP_002983642.1| flagellar hook protein FlgE [Ralstonia pickettii 12D] gi|187728708|gb|ACD29872.1| flagellar basal body FlaE domain protein [Ralstonia pickettii 12J] gi|240867310|gb|ACS64970.1| protein of unknown function DUF1078 domain protein [Ralstonia pickettii 12D] Length = 402 Score = 76.1 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 58/135 (42%), Gaps = 4/135 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVAS 61 F GL+ A + L + N++N +TVG++ +F +V +Q V Sbjct: 2 GFQQGLSGLDAASKNLDVIGSNVANANTVGYKKSTAEFGDVYARSLVGASDNQVGQGVEV 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPR--GIILTRDGRFKVTDDGSLVSASG 119 + S G+ TG LD A+ G ++ + + +R+G+F+ +G ++SA+G Sbjct: 62 TRVSQSFTQGNVTITGNPLDIAINGTGFYRMVDTASGQVSYSRNGQFQTDKNGYIISATG 121 Query: 120 KYPVLDMASVPIQIP 134 + ++ Sbjct: 122 QNLTGYGVDSTGKVN 136 Score = 71.1 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 12/137 (8%), Positives = 34/137 (24%), Gaps = 5/137 (3%) Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 T G + + D + + + + + + + + Sbjct: 265 TTQYGGGYNDTAPGVTQDGYATGRLASYSVGTDGTITARYSNGRTATLGQIAMANFKAPE 324 Query: 168 GFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222 G + S ++ +E SN + E+ MI + + + Sbjct: 325 GLQNIGGNQWVETSNSGAPNLGTPGMGSFGLLQSSAVEQSNVDLSQELVNMIIAQRSYQA 384 Query: 223 ITTLIDENEKSMLEAIR 239 I + + + Sbjct: 385 NAQTIKTQDTILQTLVT 401 >gi|157160603|ref|YP_001457921.1| flagellar hook protein FlgE [Escherichia coli HS] gi|170020528|ref|YP_001725482.1| flagellar hook protein FlgE [Escherichia coli ATCC 8739] gi|312971213|ref|ZP_07785391.1| flagellar hook protein flgE [Escherichia coli 1827-70] gi|157066283|gb|ABV05538.1| flagellar hook protein FlgE [Escherichia coli HS] gi|169755456|gb|ACA78155.1| flagellar basal body FlaE domain protein [Escherichia coli ATCC 8739] gi|310336415|gb|EFQ01601.1| flagellar hook protein flgE [Escherichia coli 1827-70] Length = 402 Score = 76.1 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 34/195 (17%), Positives = 73/195 (37%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ +LV+ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q+ K T + S + N+ + N Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPSVNAFDASNAD 176 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 177 SYNKKGSVTVFDSQG 191 Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 21/173 (12%), Positives = 55/173 (31%), Gaps = 6/173 (3%) Query: 72 SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPI 131 F + GT +D A+ + + T F + + + + + Sbjct: 229 KFNANGTLVDGAMANNIATGAINGAEPA-TFSLSFLNSMQQNTGANNIVATTQNGYKPGD 287 Query: 132 QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PL 186 + + +++ +++ + L + ++G ++ S Sbjct: 288 LVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTA 347 Query: 187 EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + T+ G LE SN + E+ MI + + S I ++ + + Sbjct: 348 GTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400 >gi|52841451|ref|YP_095250.1| flagellar hook protein FlgE [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52628562|gb|AAU27303.1| flagellar hook protein FlgE [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 437 Score = 76.1 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 29/122 (23%), Positives = 60/122 (49%), Gaps = 2/122 (1%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV--VGAIKNDIDQKISFVASG 62 FN L+ A + L + +N++N+ T+GF+ + +F+++ A + + V Sbjct: 3 FNTALSGIQASTRDLEVIGNNIANSATIGFKGSRAEFADIYSSSAYGSGSNAVGGGVKLS 62 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 + + S G+ ++ LD A+ G +F L I TR G+FK+ ++ +V+A+ + Sbjct: 63 RVHQSFATGTLSTSNNTLDLAVNGSGFFILSDQGAKIYTRAGQFKLNNENYIVNANNQRL 122 Query: 123 VL 124 Sbjct: 123 TG 124 Score = 65.3 bits (157), Expect = 7e-09, Method: Composition-based stats. Identities = 12/98 (12%), Positives = 32/98 (32%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLED 201 + + + + L + + N+ + + + + G LE+ Sbjct: 338 YTNGQSLAMGQIQLANFADPESLQNIGNTSWAETTASGQPLISAPGSGGLGLINSGRLEE 397 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ ++I+ + F + I + I Sbjct: 398 SNVDLTGELVKLINAQRNFQANAQTIRTGDAITQTIIN 435 >gi|331652129|ref|ZP_08353148.1| flagellar hook protein FlgE [Escherichia coli M718] gi|331050407|gb|EGI22465.1| flagellar hook protein FlgE [Escherichia coli M718] Length = 402 Score = 76.1 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 34/195 (17%), Positives = 73/195 (37%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ +LV+ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q+ K T + S + N+ + N Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPSVNAFDASNAD 176 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 177 SYNKKGSVTVFDSQG 191 Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 21/173 (12%), Positives = 55/173 (31%), Gaps = 6/173 (3%) Query: 72 SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPI 131 F + GT +D A+ + + T F + + + + + Sbjct: 229 EFNANGTLVDGAMANNIATGAINGADPA-TFSLSFLNSMQQNTGANNIVATTQNGYKPGD 287 Query: 132 QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PL 186 + + +++ +++ + L + ++G ++ S Sbjct: 288 LVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTA 347 Query: 187 EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + T+ G LE SN + E+ MI + + S I ++ + + Sbjct: 348 GTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400 >gi|217032455|ref|ZP_03437948.1| hypothetical protein HPB128_175g16 [Helicobacter pylori B128] gi|298736140|ref|YP_003728665.1| flagellar hook protein FlgE [Helicobacter pylori B8] gi|216945863|gb|EEC24483.1| hypothetical protein HPB128_175g16 [Helicobacter pylori B128] gi|298355329|emb|CBI66201.1| flagellar hook protein FlgE [Helicobacter pylori B8] Length = 605 Score = 76.1 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 56/146 (38%), Gaps = 22/146 (15%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56 M + + + + ++++N++N +T+G+R+ +F + + + ++ K Sbjct: 1 MNDTLLNAYSGIKTHQFGIDSLSNNIANVNTLGYRSNDPEFKTLFSSHLDALNAKSVVAN 60 Query: 57 ---SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---------------RGI 98 V LS + G ++ + E A +G WF + + Sbjct: 61 DRNYGVTGSGNVLSNKDGEYMPSEGEFHMAYQGKGWFVIGPNKNGEMTINKDGFSKKQDN 120 Query: 99 ILTRDGRFKVTDDGSLVSASGKYPVL 124 LTR G F DG LV+ G Y Sbjct: 121 FLTRAGNFARDADGYLVTPEGYYVYG 146 Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 14/103 (13%), Positives = 34/103 (33%), Gaps = 16/103 (15%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS----------------GVTVKR 196 + +A +G+ + QG + + E+ ++ Sbjct: 500 EPVARIGILAFTNDQGLRKIGGNLYEMQEGTINGENRPLSGNPILGWDEEGKLKFGKIRH 559 Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +LE SN N+ + +I + + ++ + + EAI Sbjct: 560 KYLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAIS 602 >gi|290474972|ref|YP_003467856.1| flagellar hook protein [Xenorhabdus bovienii SS-2004] gi|289174289|emb|CBJ81079.1| flagellar biosynthesis; hook protein [Xenorhabdus bovienii SS-2004] Length = 416 Score = 76.1 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 33/192 (17%), Positives = 69/192 (35%), Gaps = 6/192 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ F++V V Sbjct: 2 AFSQAVSGLNAAASNLDVIGNNIANSATFGFKSSSAAFADVFS-----GSDVGLGVKVSG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 + + GS +T +LD A+ +F + +S +R+G+F + D +L++ G Sbjct: 57 MVKNFKDGSTTTTSRQLDMAITQGGFFRMLDSNGSTFYSRNGQFNMDSDRNLINMQGMKL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A P+ + G AT + ++ + Sbjct: 117 TGYPAVQGANGPEIQKGAAPGPISIPRDMLDAKATTNVTMTANLNSMNKKVDINPFNPSN 176 Query: 183 PTPLEDLSGVTV 194 SG++V Sbjct: 177 KDSFNYSSGLSV 188 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 17/140 (12%), Positives = 43/140 (30%), Gaps = 5/140 (3%) Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 F + S+ S + + + + +Q+ +V+ + L + Sbjct: 275 DFNNSKQQSISQDSISNQQQNGYAAGSFTNYRVDSDGKIHGLYSNQQTQVLGQVVLANFS 334 Query: 165 MSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 +G + ++ + + G LE SN + E+ MI + Sbjct: 335 NPEGLAAQGDNVWVETGASGSPIVGTAGSGNFGKLISGALEASNVDMSQELVNMIVAQRN 394 Query: 220 FNSITTLIDENEKSMLEAIR 239 + S I ++ + + Sbjct: 395 YQSNAQTIKTQDQILQTLVS 414 >gi|318604252|emb|CBY25750.1| flagellar hook protein FlgE [Yersinia enterocolitica subsp. palearctica Y11] Length = 397 Score = 76.1 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 35/132 (26%), Positives = 64/132 (48%), Gaps = 6/132 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SF+I A+ ++L+T+++N++N+ T GF++ + +F+ + Q + SG Sbjct: 2 SFSIANTGLSAVTEQLNTISNNIANSGTKGFKSGRTEFASMYAQS-----QPLGVGVSGT 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122 K+ GS TG +D A+ G+ +F +++ TR G F +G LV+ASG Sbjct: 57 SQSIKKDGSIDRTGNAMDLAISGNGFFVVKNSSGDEAYTRAGMFTTDKNGVLVNASGMKL 116 Query: 123 VLDMASVPIQIP 134 A + Sbjct: 117 QGYPADAAGNVQ 128 Score = 73.0 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 48/155 (30%), Gaps = 12/155 (7%) Query: 92 LESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQK 151 I T +F + + G +I ++ G+ + Sbjct: 250 DNYGIDITYTGTTQFHAEFLPAPSKSDGYTA---GTKNGERIENDGSVYATFSNGKQMLQ 306 Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANS 206 GK++ L + G + + S S T + G LE SN + Sbjct: 307 GKLV----LANFANPNGLATQNGTTWSVTSRSGAPLLGSPGTGLLGNIVAGALEASNVDL 362 Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 E+ ++ + + + T +I N+ M + + Sbjct: 363 TAELVGLMTAQRNYQANTKIISTNDSMMNALFQVL 397 >gi|302343058|ref|YP_003807587.1| fagellar hook-basal body protein [Desulfarculus baarsii DSM 2075] gi|301639671|gb|ADK84993.1| fagellar hook-basal body protein [Desulfarculus baarsii DSM 2075] Length = 452 Score = 76.1 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 30/140 (21%), Positives = 64/140 (45%), Gaps = 13/140 (9%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ-------KI 56 SF G++ + Q L+ VADN++N++T G+++ + +F++V+ + ++ Sbjct: 5 SFFNGVSGLKSFSQGLNIVADNLANSNTYGYKSSRAEFADVLYRELSYTGSDLTTEIDQV 64 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI--ILTRDGRFKVT----D 110 A+ + G+ TG LD A++G+ +F +++ TR G+F V Sbjct: 65 GQGATVWSHQLMNQGAIQETGRTLDLAIDGNGFFTVKNLDTEELYYTRAGQFGVDGVVGQ 124 Query: 111 DGSLVSASGKYPVLDMASVP 130 +G +++ G Sbjct: 125 EGFIINDQGYRLQGFAIGDD 144 Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats. Identities = 13/92 (14%), Positives = 34/92 (36%), Gaps = 7/92 (7%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPP-------TPLEDLSGVTVKRGFLEDSNANSM 207 + + L + R ++ + + E+ + ++ LE S ++ Sbjct: 358 VGVVALTTFASPGNLRREGDNLWAYDADAGEIWVGQPTDEEFAMGAIEDQSLETSTVDTA 417 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 EM MI + F + + + +++ + AI Sbjct: 418 TEMMNMIIYQRAFQASSKTVTTSDEMIKTAIN 449 >gi|291334314|gb|ADD93975.1| hypothetical protein [uncultured marine bacterium MedDCM-OCT-S09-C247] Length = 449 Score = 76.1 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 18/123 (14%), Positives = 37/123 (30%), Gaps = 5/123 (4%) Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 D S + + + + G + + V+ + L S G + NS Sbjct: 324 VTQDGFSAGRLTNLEIDTYGNVQAGYSNGQNVVLGKIMLASFASESGLKQIGNSTFIATA 383 Query: 182 PPTPLEDLS-----GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 E + G +E SN + E+ +I + + + I+ + Sbjct: 384 ASGDPELGEGAEDGFGQILSGSIERSNVDITEELVNLITSQRNYQAAAKAIETSTSMTQT 443 Query: 237 AIR 239 I Sbjct: 444 IIN 446 >gi|281600495|gb|ADA73479.1| Flagellar hook protein FlgE [Shigella flexneri 2002017] gi|332761421|gb|EGJ91705.1| flagellar hook protein flgE [Shigella flexneri K-671] gi|333019459|gb|EGK38742.1| flagellar hook protein flgE [Shigella flexneri K-304] Length = 379 Score = 76.1 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 31/195 (15%), Positives = 70/195 (35%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ +L++ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLLNTQGLQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + Q+ K T + S + + N Sbjct: 117 TGYPVTGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNAD 176 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 177 SYNKKGSVTVFDSQG 191 Score = 68.7 bits (166), Expect = 6e-10, Method: Composition-based stats. Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + + + +++ +++ + L + ++G ++ S Sbjct: 256 TQNGYKPGDLVSYQINDDGTVVGNNSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 315 Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + T+ G LE SN + E+ MI + + S I ++ + Sbjct: 316 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYKSNAQTIKTQDQILNTR 375 Query: 238 IR 239 + Sbjct: 376 VN 377 >gi|331671804|ref|ZP_08372600.1| LfgE [Escherichia coli TA280] gi|331070793|gb|EGI42152.1| LfgE [Escherichia coli TA280] Length = 400 Score = 76.1 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 40/187 (21%), Positives = 70/187 (37%), Gaps = 6/187 (3%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66 I A+ ++L +++N++N TVG++++ +FS + Q + +G Sbjct: 5 IAATGLNAVNEQLDGISNNIANAGTVGYKSMTTQFSAMYA-----GSQAMGVSVAGTAQS 59 Query: 67 SKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125 GS +STG LD A+ D +F + +S I TR G F+ +G +V+ASG Y Sbjct: 60 ISRGGSLVSTGNALDLAINDDGFFVMCDSAGNISYTRAGSFETDKNGYIVNASGDYLQGY 119 Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185 + + G I + T R + N Sbjct: 120 PVDDAGTLQTGTVTDIQIKTGNIPAQASSSLTFTANFDASDAAIDRTTVPFDATNSSSYT 179 Query: 186 LEDLSGV 192 + V Sbjct: 180 DSYTTTV 186 Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats. Identities = 25/194 (12%), Positives = 55/194 (28%), Gaps = 10/194 (5%) Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113 Q + + +TG F ++ I LT D Sbjct: 211 QYTFDGQQQTGVPATTLTFDPNTGKLTSPTTPQTIEFQTDAAAPIDLTVDYSTCTQYGSE 270 Query: 114 L-VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172 V+ + +Q+ +++ GE +G+V+ L + G Sbjct: 271 FSVTTNAADGYASATQNGVQVDDDGKVYATYSNGERMLQGQVV----LATFPNENGLEAV 326 Query: 173 ENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 + T+ G LE SN + E+ ++ + + + T +I Sbjct: 327 SGTAWVQTGESGTPLIGVPGSGTCGTLTSGVLESSNVDITSELVNLMTAQRNYQANTKVI 386 Query: 228 DENEKSMLEAIRNI 241 + + + + Sbjct: 387 ATSTQLDDALFQAM 400 >gi|296103611|ref|YP_003613757.1| Flagellar basal body FlaE domain protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058070|gb|ADF62808.1| Flagellar basal body FlaE domain protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 399 Score = 76.1 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 26/149 (17%), Positives = 59/149 (39%), Gaps = 7/149 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 F+ GL+ A + L V +N++N+ TVGF+ V F+++ V Sbjct: 2 GFSQGLSGLSAAAKALDVVGNNIANSQTVGFKAGSVSFADIFA------GSTGMGVQVAG 55 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122 + G+ ++ + LD + G +F + + R+G+F+ +G +V+ + Sbjct: 56 VSQNFGDGALMNGASALDMGISGRGFFRMVDEAGSVFYGRNGQFEQDQNGFIVNKTNGLF 115 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQK 151 + + I ++ + + Sbjct: 116 LTGYQATDGVINPGAQVGPIRIPTDDMPP 144 Score = 76.1 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 20/142 (14%), Positives = 41/142 (28%), Gaps = 9/142 (6%) Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162 D + V Q+ E+ + G+ +A + L Sbjct: 260 DLNITQNASDTQVKLDEIDGQAPGKFNSYQVSDTGEVIAIYSNGKRQ----TVAQVVLAD 315 Query: 163 VDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLT 217 + G ++ N+ + + + + LE SN N EM MI Sbjct: 316 FANAGGLEQQGNNLWAETSQSGQPFLGTSGSGSFGDISGNMLESSNVNLGDEMVNMIVYQ 375 Query: 218 QKFNSITTLIDENEKSMLEAIR 239 + + S + I + + + Sbjct: 376 RNYQSNSQTIKTQSEVLQTLVN 397 >gi|74311638|ref|YP_310057.1| flagellar hook protein FlgE [Shigella sonnei Ss046] gi|157157539|ref|YP_001462310.1| flagellar hook protein FlgE [Escherichia coli E24377A] gi|191168462|ref|ZP_03030250.1| flagellar hook protein FlgE [Escherichia coli B7A] gi|193064513|ref|ZP_03045593.1| flagellar hook protein FlgE [Escherichia coli E22] gi|194438060|ref|ZP_03070153.1| flagellar hook protein FlgE [Escherichia coli 101-1] gi|209918330|ref|YP_002292414.1| flagellar hook protein FlgE [Escherichia coli SE11] gi|218694610|ref|YP_002402277.1| flagellar hook protein FlgE [Escherichia coli 55989] gi|253773900|ref|YP_003036731.1| flagellar hook protein FlgE [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254161182|ref|YP_003044290.1| flagellar hook protein FlgE [Escherichia coli B str. REL606] gi|256018667|ref|ZP_05432532.1| flagellar hook protein FlgE [Shigella sp. D9] gi|260843316|ref|YP_003221094.1| flagellar hook protein FlgE [Escherichia coli O103:H2 str. 12009] gi|260854559|ref|YP_003228450.1| flagellar hook protein FlgE [Escherichia coli O26:H11 str. 11368] gi|260867439|ref|YP_003233841.1| flagellar hook protein FlgE [Escherichia coli O111:H- str. 11128] gi|293433366|ref|ZP_06661794.1| flagellar hook protein FlgE [Escherichia coli B088] gi|300816778|ref|ZP_07096998.1| flagellar hook protein FlgE [Escherichia coli MS 107-1] gi|300821143|ref|ZP_07101292.1| flagellar hook protein FlgE [Escherichia coli MS 119-7] gi|300902467|ref|ZP_07120449.1| flagellar hook protein FlgE [Escherichia coli MS 84-1] gi|300922602|ref|ZP_07138702.1| flagellar hook protein FlgE [Escherichia coli MS 182-1] gi|300928372|ref|ZP_07143906.1| flagellar hook protein FlgE [Escherichia coli MS 187-1] gi|301304985|ref|ZP_07211087.1| flagellar hook protein FlgE [Escherichia coli MS 124-1] gi|301328554|ref|ZP_07221615.1| flagellar hook protein FlgE [Escherichia coli MS 78-1] gi|309798070|ref|ZP_07692445.1| flagellar hook protein FlgE [Escherichia coli MS 145-7] gi|331667476|ref|ZP_08368340.1| flagellar hook protein FlgE [Escherichia coli TA271] gi|331676867|ref|ZP_08377563.1| flagellar hook protein FlgE [Escherichia coli H591] gi|332279736|ref|ZP_08392149.1| flagellar hook protein FlgE [Shigella sp. D9] gi|73855115|gb|AAZ87822.1| flagellar hook protein [Shigella sonnei Ss046] gi|157079569|gb|ABV19277.1| flagellar hook protein FlgE [Escherichia coli E24377A] gi|190901481|gb|EDV61242.1| flagellar hook protein FlgE [Escherichia coli B7A] gi|192927765|gb|EDV82379.1| flagellar hook protein FlgE [Escherichia coli E22] gi|194422996|gb|EDX38990.1| flagellar hook protein FlgE [Escherichia coli 101-1] gi|209911589|dbj|BAG76663.1| flagellar hook protein FlgE [Escherichia coli SE11] gi|218351342|emb|CAU97048.1| flagellar hook protein [Escherichia coli 55989] gi|253324944|gb|ACT29546.1| flagellar basal body FlaE domain protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253973083|gb|ACT38754.1| flagellar hook protein E [Escherichia coli B str. REL606] gi|253977297|gb|ACT42967.1| flagellar hook protein E [Escherichia coli BL21(DE3)] gi|257753208|dbj|BAI24710.1| flagellar hook protein FlgE [Escherichia coli O26:H11 str. 11368] gi|257758463|dbj|BAI29960.1| flagellar hook protein FlgE [Escherichia coli O103:H2 str. 12009] gi|257763795|dbj|BAI35290.1| flagellar hook protein FlgE [Escherichia coli O111:H- str. 11128] gi|291324185|gb|EFE63607.1| flagellar hook protein FlgE [Escherichia coli B088] gi|300405499|gb|EFJ89037.1| flagellar hook protein FlgE [Escherichia coli MS 84-1] gi|300421079|gb|EFK04390.1| flagellar hook protein FlgE [Escherichia coli MS 182-1] gi|300463630|gb|EFK27123.1| flagellar hook protein FlgE [Escherichia coli MS 187-1] gi|300526442|gb|EFK47511.1| flagellar hook protein FlgE [Escherichia coli MS 119-7] gi|300530552|gb|EFK51614.1| flagellar hook protein FlgE [Escherichia coli MS 107-1] gi|300839703|gb|EFK67463.1| flagellar hook protein FlgE [Escherichia coli MS 124-1] gi|300844946|gb|EFK72706.1| flagellar hook protein FlgE [Escherichia coli MS 78-1] gi|308118353|gb|EFO55615.1| flagellar hook protein FlgE [Escherichia coli MS 145-7] gi|313848602|emb|CAQ31597.2| flagellar hook protein FlgE, subunit of Flagellum [Escherichia coli BL21(DE3)] gi|315253877|gb|EFU33845.1| flagellar hook protein FlgE [Escherichia coli MS 85-1] gi|323156883|gb|EFZ43017.1| flagellar hook protein flgE [Escherichia coli EPECa14] gi|323163758|gb|EFZ49577.1| flagellar hook protein flgE [Escherichia coli E128010] gi|323165584|gb|EFZ51371.1| flagellar hook protein flgE [Shigella sonnei 53G] gi|323175693|gb|EFZ61287.1| flagellar hook protein flgE [Escherichia coli 1180] gi|323185801|gb|EFZ71162.1| flagellar hook protein flgE [Escherichia coli 1357] gi|323947622|gb|EGB43626.1| fagellar hook-basal body protein [Escherichia coli H120] gi|323962675|gb|EGB58253.1| fagellar hook-basal body protein [Escherichia coli H489] gi|323973335|gb|EGB68524.1| fagellar hook-basal body protein [Escherichia coli TA007] gi|324017420|gb|EGB86639.1| flagellar hook protein FlgE [Escherichia coli MS 117-3] gi|324117353|gb|EGC11260.1| fagellar hook-basal body protein [Escherichia coli E1167] gi|331065061|gb|EGI36956.1| flagellar hook protein FlgE [Escherichia coli TA271] gi|331075556|gb|EGI46854.1| flagellar hook protein FlgE [Escherichia coli H591] gi|332102088|gb|EGJ05434.1| flagellar hook protein FlgE [Shigella sp. D9] Length = 401 Score = 76.1 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 71/195 (36%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ +LV+ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q+ K T + S + + N Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNAD 176 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 177 SYNKKGSVTVFDSQG 191 Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + + + +++ +++ + L + ++G ++ S Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 337 Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + T+ G LE SN + E+ MI + + S I ++ + Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397 Query: 238 IR 239 + Sbjct: 398 VN 399 >gi|322432989|ref|YP_004210238.1| flagellar hook-basal body protein [Acidobacterium sp. MP5ACTX9] gi|321165216|gb|ADW70920.1| flagellar hook-basal body protein [Acidobacterium sp. MP5ACTX9] Length = 412 Score = 76.1 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 37/153 (24%), Positives = 62/153 (40%), Gaps = 6/153 (3%) Query: 9 LAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI-----KNDIDQKISFVASGK 63 L+ +A + +L V++N++N DTVGF+ V FS+V ND Q V + + Sbjct: 8 LSGLIASQSQLQAVSNNLANLDTVGFKDQNVNFSDVFAQSSLNNGSNDPVQTGLGVNASQ 67 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG + AL G+ +F ++ TR G F G LV+ SG Sbjct: 68 TTSDFTDGAVSATGIASNMALTGNGFFVTKTATGATAYTRAGDFTKNSSGQLVTPSGDLV 127 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI 155 + A+ + + G + Sbjct: 128 MGYPAANGVVNTSGELQPIQIGTGTVIPASATT 160 Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 15/96 (15%), Positives = 33/96 (34%), Gaps = 5/96 (5%) Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNAN 205 + + + S +QG +R N+ + E + G +E SN + Sbjct: 315 NPVALGQVAVASFANTQGLLRTGNNDYQATVGSGAASVGTAETGGRGVITGGSVESSNVD 374 Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 E +MI Q + + + ++ ++ I Sbjct: 375 VAAEFAKMIVAQQAYQANAKTVTTFDQISQATLQMI 410 >gi|291538503|emb|CBL11614.1| fagellar hook-basal body proteins [Roseburia intestinalis XB6B4] Length = 547 Score = 76.1 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 24/141 (17%), Positives = 51/141 (36%), Gaps = 18/141 (12%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS--- 61 ++ + ++ + +N++N +TV F++ V F +V+ + ++ + + Sbjct: 1 MYSAVSGLKTHQTKMDVIGNNIANVNTVAFKSSSVVFQDVLYQMTSNASGANAATGTGGV 60 Query: 62 ------------GKEYLSKEVGSFISTGTELDFALEGD---AWFALESPRGIILTRDGRF 106 G+ +TG D L +F + + + TR G F Sbjct: 61 NAKQIGLGVTTGATNLSITTSGAAETTGRAFDIRLSDQSTTNFFVVNNGSENLFTRAGSF 120 Query: 107 KVTDDGSLVSASGKYPVLDMA 127 V G+L S Y V+ Sbjct: 121 YVDGAGNLCMTSTGYTVMGWQ 141 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 15/129 (11%), Positives = 42/129 (32%), Gaps = 6/129 (4%) Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + + I + + + + +++ + + + G + + Sbjct: 416 SIDDGVTGKGKKLGAMIGISIDNNGLIKGTYDNGNTEILGQIAVAQFANASGLEKVGENC 475 Query: 177 ISPNIPPTPLE------DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + + G ++ G LE SN + E QMI + F + + +I + Sbjct: 476 YRTTLNSGEFDGIGVEISADGSSMTSGELEMSNVDLSTEFTQMIITQRGFQANSRIITTS 535 Query: 231 EKSMLEAIR 239 + + E + Sbjct: 536 DTLLEELVN 544 >gi|289670507|ref|ZP_06491582.1| flagellar hook protein FlgE [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 262 Score = 76.1 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 33/92 (35%), Gaps = 5/92 (5%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSM 207 K + + L S QG + N+ + + + V+ G LE S + Sbjct: 169 KPLGQVALSSFVNPQGLQSQGNNMWAESYTSGAARTGAPNTSDLGQVESGSLEASTVDLT 228 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 ++ MI + F + + +I ++ I Sbjct: 229 EQLVNMIVAQRNFQANSQMISTQDQVTQTIIN 260 >gi|58039490|ref|YP_191454.1| flagellar hook protein FlgE [Gluconobacter oxydans 621H] gi|58001904|gb|AAW60798.1| Flagellar hook protein FlgE [Gluconobacter oxydans 621H] Length = 411 Score = 75.7 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 24/139 (17%), Positives = 51/139 (36%), Gaps = 14/139 (10%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK--NDIDQKISFV 59 + + ++ A + +++N++N+ T G++ F + V + ND + V Sbjct: 5 INAVHTAVSGLNAQSHAFTDLSNNIANSQTTGYKASTTSFEDYVTNNELANDGESLSDSV 64 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALES------------PRGIILTRDGRFK 107 A+ + ++ A+ G+ +F + TR+G F Sbjct: 65 AATTRQHTDNQCMVTTSTNSTALAISGNGFFNVVQATGQSNDSTPVLGTQQYYTRNGDFS 124 Query: 108 VTDDGSLVSASGKYPVLDM 126 +G LV+ SG Y Sbjct: 125 QDKNGYLVNTSGYYLEGYN 143 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 10/107 (9%), Positives = 35/107 (32%), Gaps = 5/107 (4%) Query: 137 DEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSG 191 E + +++A + L + + + + Sbjct: 301 METDGSVMATFDNGYSQLVAKIPLTTFADPNSLSAQNGQAYTATSQSGSPQINAVNTNGA 360 Query: 192 VTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 T+ G +E+S + ++ ++I Q + + T ++ ++ + + Sbjct: 361 GTLTTGSIEESTTDLTGDLSKLIVAQQAYGANTKVVSTADQLLQTTL 407 >gi|121997321|ref|YP_001002108.1| flagellar basal-body rod protein FlgC [Halorhodospira halophila SL1] gi|121588726|gb|ABM61306.1| flagellar basal-body rod protein FlgC [Halorhodospira halophila SL1] Length = 189 Score = 75.7 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 32/244 (13%), Positives = 67/244 (27%), Gaps = 67/244 (27%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQK 55 + ++ A + RL+TVA N++N +TV +R + F+ + Q Sbjct: 4 MNAIDVAGTGMNAQQLRLNTVASNLANAETVASSPEEAYRARQPVFAAA-------LHQA 56 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115 G ++ +G +D +++ Sbjct: 57 QGGYPQGGGPQPAHTPTWAESGGPVD-------------------------RISPVSFQR 91 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 G P ++ + S + Sbjct: 92 QFFGGEPAGVPSAGDPYASPSPSVPVFMPGVVESDAEIEPLYQPHHPQADDD-------- 143 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 G++ SN N++ EM MI ++ F + +++ + ML Sbjct: 144 ---------------------GYVYRSNVNTVEEMTNMISASRSFQNNVEVMNTSRDLML 182 Query: 236 EAIR 239 E +R Sbjct: 183 ETLR 186 >gi|308183061|ref|YP_003927188.1| flagellar hook protein FlgE [Helicobacter pylori PeCan4] gi|308065246|gb|ADO07138.1| flagellar hook protein FlgE [Helicobacter pylori PeCan4] Length = 605 Score = 75.7 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 56/146 (38%), Gaps = 22/146 (15%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56 M + + + + ++++N++N +T+G+R+ +F + + + ++ K Sbjct: 1 MNDTLLNAYSGIKTHQFGIDSLSNNIANVNTLGYRSNDPEFKTLFSSHLDALNAKSVVAN 60 Query: 57 ---SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---------------RGI 98 V LS + G ++ + E A +G WF + + Sbjct: 61 DRNYGVTGSGNVLSNKDGEYMPSEGEFHMAYQGKGWFVIGPNKNGEMTINKDGFSKKQDN 120 Query: 99 ILTRDGRFKVTDDGSLVSASGKYPVL 124 LTR G F DG LV+ G Y Sbjct: 121 FLTRAGNFARDADGYLVTPEGYYVYG 146 Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 14/103 (13%), Positives = 34/103 (33%), Gaps = 16/103 (15%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS----------------GVTVKR 196 + +A +G+ + QG + + E+ ++ Sbjct: 500 EPVARIGILAFTNDQGLRKIGGNLYEMQEGTINGENRPLSGNPILGWDEEGKLKFGKIRH 559 Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +LE SN N+ + +I + + ++ + + EAI Sbjct: 560 KYLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAIS 602 >gi|108563315|ref|YP_627631.1| flagellar hook protein FlgE [Helicobacter pylori HPAG1] gi|107837088|gb|ABF84957.1| flagellar hook protein [Helicobacter pylori HPAG1] Length = 605 Score = 75.7 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 56/146 (38%), Gaps = 22/146 (15%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56 M + + + + ++++N++N +T+G+R+ +F + + + ++ K Sbjct: 1 MNDTLLNAYSGIKTHQFGIDSLSNNIANVNTLGYRSNDPEFKTLFSSHLDALNAKSVVAN 60 Query: 57 ---SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---------------RGI 98 V LS + G ++ + E A +G WF + + Sbjct: 61 DRNYGVTGSGNVLSNKDGEYMPSEGEFHMAYQGKGWFVIGPNKNGEMTINKDGFSKKQDN 120 Query: 99 ILTRDGRFKVTDDGSLVSASGKYPVL 124 LTR G F DG LV+ G Y Sbjct: 121 FLTRAGNFARDADGYLVTPEGYYVYG 146 Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 14/103 (13%), Positives = 34/103 (33%), Gaps = 16/103 (15%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS----------------GVTVKR 196 + +A +G+ + QG + + E+ ++ Sbjct: 500 EPVARIGILAFTNDQGLRKIGGNLYEMQEGTINGENRPLSGNPILGWDEEGKLKFGKIRH 559 Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +LE SN N+ + +I + + ++ + + EAI Sbjct: 560 KYLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAIS 602 >gi|89068728|ref|ZP_01156114.1| flagellar hook protein FlgE, putative [Oceanicola granulosus HTCC2516] gi|89045691|gb|EAR51753.1| flagellar hook protein FlgE, putative [Oceanicola granulosus HTCC2516] Length = 432 Score = 75.7 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 12/83 (14%), Positives = 31/83 (37%), Gaps = 5/83 (6%) Query: 162 SVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 +V +G V + + + ++ G LE SN + E+ +I Sbjct: 347 NVSNPEGLVAGNGNAYKLSRASGAMTLGIAGGGGTASIYAGALEGSNVDIAEELTDLIAT 406 Query: 217 TQKFNSITTLIDENEKSMLEAIR 239 + +++ ++ ++ + E R Sbjct: 407 QRAYSTNAKVVTTADEMLDETTR 429 Score = 68.0 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 33/135 (24%), Positives = 58/135 (42%), Gaps = 10/135 (7%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + G++ A ++ +++N++N +T GFR FS++V + +S V + Sbjct: 6 AMKTGVSGLQANAASVANISENIANANTDGFRRS---FSQMVTTTTTN-PSSMSGVIARD 61 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGI------ILTRDGRFKVTDDGSLVSA 117 GS T + D ALEG +F + +LTR G F ++G+L +A Sbjct: 62 RIDMGTPGSMRPTDSATDLALEGGGFFVVSQRPDEPLASNYMLTRAGSFTPDENGNLKNA 121 Query: 118 SGKYPVLDMASVPIQ 132 +G Y Q Sbjct: 122 AGFYLAGFPTDQNGQ 136 >gi|89895709|ref|YP_519196.1| hypothetical protein DSY2963 [Desulfitobacterium hafniense Y51] gi|89335157|dbj|BAE84752.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 312 Score = 75.7 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 20/149 (13%), Positives = 48/149 (32%), Gaps = 14/149 (9%) Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 + + G + +G +VP I + + + + + Sbjct: 165 IDMDELGRPLDWNGDILP-TAFAVPEGAEDVQISTEGVLSATIDGSRQTLGQINIVTFAN 223 Query: 166 SQGFVRRENSGISPNI------------PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQM 213 +G VR ++ P + +E+ + ++ LE SN N M +M Sbjct: 224 PEGLVRDGDNLYFAPDTAGVTGDELVGTPGSQVEERTLGKLRTQSLEGSNVNLASAMTEM 283 Query: 214 IHLTQKFNSITTLIDENEKSMLEAIRNIA 242 I + + + +I ++ M ++ Sbjct: 284 IQVQRAYQLNARMITNGDQ-MWSMANSLR 311 Score = 71.4 bits (173), Expect = 9e-11, Method: Composition-based stats. Identities = 26/129 (20%), Positives = 54/129 (41%), Gaps = 13/129 (10%) Query: 19 LSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------------ISFVASGKEYL 66 + + +NMSN +T G++ +V F+E + A +++ + V Sbjct: 1 MDILGNNMSNVNTPGYKAQRVNFAEALAAEMRPAEREFNGQLVGERIDVGAGVIYPTIDT 60 Query: 67 SKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGKYPVLD 125 G T D A++G+ +F + + G TR G F++ G LV++ G + Sbjct: 61 DYRQGIIRETENPFDLAIDGEGFFPVRTANGESRYTRVGNFELDSQGKLVNSDGYILEVK 120 Query: 126 MASVPIQIP 134 + + + + Sbjct: 121 IPADAMDLY 129 >gi|317012717|gb|ADU83325.1| flagellar hook protein FlgE [Helicobacter pylori Lithuania75] Length = 605 Score = 75.7 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 56/146 (38%), Gaps = 22/146 (15%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56 M + + + + ++++N++N +T+G+R+ +F + + + ++ K Sbjct: 1 MNDTLLNAYSGIKTHQFGIDSLSNNIANVNTLGYRSNDPEFKTLFSSHLDALNAKSVVAN 60 Query: 57 ---SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---------------RGI 98 V LS + G ++ + E A +G WF + + Sbjct: 61 DRNYGVTGSGNVLSNKDGEYMPSEGEFHMAYQGKGWFVIGPNKNGEMTINKDGFSKKQDN 120 Query: 99 ILTRDGRFKVTDDGSLVSASGKYPVL 124 LTR G F DG LV+ G Y Sbjct: 121 FLTRAGNFARDADGYLVTPEGYYVYG 146 Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 14/103 (13%), Positives = 34/103 (33%), Gaps = 16/103 (15%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS----------------GVTVKR 196 + +A +G+ + QG + + E+ ++ Sbjct: 500 EPVARIGILAFTNDQGLRKIGGNLYEMQEGTINGENRPLSGNPILGWDEEGKLKFGKIRH 559 Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +LE SN N+ + +I + + ++ + + EAI Sbjct: 560 KYLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAIS 602 >gi|218689029|ref|YP_002397241.1| flagellar hook protein FlgE [Escherichia coli ED1a] gi|218426593|emb|CAR07421.1| flagellar hook protein [Escherichia coli ED1a] Length = 401 Score = 75.7 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 34/195 (17%), Positives = 73/195 (37%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ +LV+ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q+ K T + S + N+ + N Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDSLPSVNAFDASNAD 176 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 177 SYNKKGSVTVFDSQG 191 Score = 72.2 bits (175), Expect = 6e-11, Method: Composition-based stats. Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + + + +++ +++ + L + ++G ++ S Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 337 Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + T+ G LE SN + E+ MI + + S I ++ + Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397 Query: 238 IR 239 + Sbjct: 398 VN 399 >gi|15645524|ref|NP_207700.1| flagellar hook protein FlgE [Helicobacter pylori 26695] gi|2314044|gb|AAD07954.1| flagellar hook (flgE) [Helicobacter pylori 26695] Length = 605 Score = 75.7 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 56/146 (38%), Gaps = 22/146 (15%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56 M + + + + ++++N++N +T+G+R+ +F + + + ++ K Sbjct: 1 MNDTLLNAYSGIKTHQFGIDSLSNNIANVNTLGYRSNDPEFKTLFSSHLDALNAKSVVAN 60 Query: 57 ---SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---------------RGI 98 V LS + G ++ + E A +G WF + + Sbjct: 61 DRNYGVTGSGNVLSNKDGEYMPSEGEFHMAYQGKGWFVIGPNKNGEITINKDGFSKKQDN 120 Query: 99 ILTRDGRFKVTDDGSLVSASGKYPVL 124 LTR G F DG LV+ G Y Sbjct: 121 FLTRAGNFARDADGYLVTPEGYYVYG 146 Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 14/103 (13%), Positives = 34/103 (33%), Gaps = 16/103 (15%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS----------------GVTVKR 196 + +A +G+ + QG + + E+ ++ Sbjct: 500 EPVARIGILAFTNDQGLRKIGGNLYEMQEGTINGENRPLSGNPILGWDEEGKLKFGKIRH 559 Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +LE SN N+ + +I + + ++ + + EAI Sbjct: 560 KYLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAIS 602 >gi|308184693|ref|YP_003928826.1| flagellar hook protein FlgE [Helicobacter pylori SJM180] gi|308060613|gb|ADO02509.1| flagellar hook protein FlgE [Helicobacter pylori SJM180] Length = 605 Score = 75.7 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 56/146 (38%), Gaps = 22/146 (15%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56 M + + + + ++++N++N +T+G+R+ +F + + + ++ K Sbjct: 1 MNDTLLNAYSGIKTHQFGIDSLSNNIANVNTLGYRSNDPEFKTLFSSHLDALNAKSVVAN 60 Query: 57 ---SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---------------RGI 98 V LS + G ++ + E A +G WF + + Sbjct: 61 DRNYGVTGSGNVLSNKDGEYMPSEGEFHMAYQGKGWFVIGPNKNGEMTINKDGFSKKQDN 120 Query: 99 ILTRDGRFKVTDDGSLVSASGKYPVL 124 LTR G F DG LV+ G Y Sbjct: 121 FLTRAGNFARDADGYLVTPEGYYVYG 146 Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 14/103 (13%), Positives = 34/103 (33%), Gaps = 16/103 (15%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS----------------GVTVKR 196 + +A +G+ + QG + + E+ ++ Sbjct: 500 EPVARIGILAFTNDQGLRKIGGNLYEMQEGTINGENRPLSGNPILGWDEEGKLKFGKIRH 559 Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +LE SN N+ + +I + + ++ + + EAI Sbjct: 560 KYLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAIS 602 >gi|297380105|gb|ADI34992.1| flagellar hook protein FlgE [Helicobacter pylori v225d] gi|308062226|gb|ADO04114.1| flagellar hook protein FlgE [Helicobacter pylori Cuz20] gi|308063738|gb|ADO05625.1| flagellar hook protein FlgE [Helicobacter pylori Sat464] gi|317178740|dbj|BAJ56528.1| flagellar hook protein FlgE [Helicobacter pylori F30] Length = 605 Score = 75.7 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 56/146 (38%), Gaps = 22/146 (15%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56 M + + + + ++++N++N +T+G+R+ +F + + + ++ K Sbjct: 1 MNDTLLNAYSGIKTHQFGIDSLSNNIANVNTLGYRSNDPEFKTLFSSHLDALNAKSVVAN 60 Query: 57 ---SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---------------RGI 98 V LS + G ++ + E A +G WF + + Sbjct: 61 DRNYGVTGSGNVLSNKDGEYMPSEGEFHMAYQGKGWFVIGPNKNGEITINKDGFSKKQDN 120 Query: 99 ILTRDGRFKVTDDGSLVSASGKYPVL 124 LTR G F DG LV+ G Y Sbjct: 121 FLTRAGNFARDADGYLVTPEGYYVYG 146 Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 14/103 (13%), Positives = 34/103 (33%), Gaps = 16/103 (15%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS----------------GVTVKR 196 + +A +G+ + QG + + E+ ++ Sbjct: 500 EPVARIGILAFTNDQGLRKIGGNLYEMQEGTINGENRPLSGNPILGWDEEGKLKFGKIRH 559 Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +LE SN N+ + +I + + ++ + + EAI Sbjct: 560 KYLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAIS 602 >gi|241589579|ref|YP_002979604.1| protein of unknown function DUF1078 domain protein [Ralstonia pickettii 12D] gi|240868291|gb|ACS65950.1| protein of unknown function DUF1078 domain protein [Ralstonia pickettii 12D] Length = 401 Score = 75.7 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 32/135 (23%), Positives = 62/135 (45%), Gaps = 4/135 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFVAS 61 F GL+ A + LS++ N++N +TVG++ V+F +V +Q V+ Sbjct: 2 GFQQGLSGLDAASKNLSSIGSNVANVNTVGYKKSTVQFGDVYARSLVGATDNQIGQGVSV 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPR--GIILTRDGRFKVTDDGSLVSASG 119 + S G+ TG LD A+ G ++ + + TR+G+F+ +G ++SA+G Sbjct: 62 TRVSQSFTQGNVTVTGNPLDIAINGMGFYRMVDSSSGQVSYTRNGQFQTDKNGFVISATG 121 Query: 120 KYPVLDMASVPIQIP 134 + ++ Sbjct: 122 QNLTGYGVDASGKVN 136 Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 12/124 (9%), Positives = 31/124 (25%), Gaps = 5/124 (4%) Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 D + I + + V + + + +G + Sbjct: 276 MVKQDGYATGRLASYSVGIDGTVTGQYSNGRSAVFGQIAMANFKAPEGLQNIGGNQWVET 335 Query: 181 IPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 S ++ +E SN + E+ MI + + + I + + Sbjct: 336 ANSGSPNLGTPGMGSFGLLRSSAVEQSNVDLSVELVNMIVAQRSYQANAQTIKTEDSLLQ 395 Query: 236 EAIR 239 + Sbjct: 396 TLVS 399 >gi|110805093|ref|YP_688613.1| flagellar hook protein FlgE [Shigella flexneri 5 str. 8401] gi|110614641|gb|ABF03308.1| flagellar hook protein FlgE [Shigella flexneri 5 str. 8401] Length = 402 Score = 75.7 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 31/195 (15%), Positives = 70/195 (35%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ +L++ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLLNTQGLQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + Q+ K T + S + + N Sbjct: 117 TGYPVTGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNAD 176 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 177 SYNKKGSVTVFDSQG 191 Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats. Identities = 21/173 (12%), Positives = 55/173 (31%), Gaps = 6/173 (3%) Query: 72 SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPI 131 F + GT +D A+ + + T F + + + + + Sbjct: 229 EFNANGTLVDGAMANNIATGAINGAEPA-TFSLSFLNSMQQNTGANNIVATTQNGYKPGD 287 Query: 132 QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PL 186 + + +++ +++ + L + ++G ++ S Sbjct: 288 LVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTA 347 Query: 187 EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + T+ G LE SN + E+ MI + + S I ++ + + Sbjct: 348 GTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYKSNAQTIKTQDQILNTRVN 400 >gi|332759635|gb|EGJ89940.1| flagellar hook protein flgE [Shigella flexneri 2747-71] gi|332767683|gb|EGJ97876.1| flagellar hook protein FlgE [Shigella flexneri 2930-71] Length = 402 Score = 75.7 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 31/195 (15%), Positives = 70/195 (35%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ +L++ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLLNTQGLQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + Q+ K T + S + + N Sbjct: 117 TGYPVTGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNAD 176 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 177 SYNKKGSVTVFDSQG 191 Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats. Identities = 21/173 (12%), Positives = 55/173 (31%), Gaps = 6/173 (3%) Query: 72 SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPI 131 F + GT +D A+ + + T F + + + + + Sbjct: 229 EFNANGTLVDGAMANNIATGAINGAEPA-TFSLSFLNSMQQNTGANNIVATTQNGYKPGD 287 Query: 132 QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PL 186 + + +++ +++ + L + ++G ++ S Sbjct: 288 LVSYQINDDGTVVGSNSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTA 347 Query: 187 EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + T+ G LE SN + E+ MI + + S I ++ + + Sbjct: 348 GTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYKSNAQTIKTQDQILNTRVN 400 >gi|317182208|dbj|BAJ59992.1| flagellar hook protein FlgE [Helicobacter pylori F57] Length = 605 Score = 75.7 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 56/146 (38%), Gaps = 22/146 (15%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56 M + + + + ++++N++N +T+G+R+ +F + + + ++ K Sbjct: 1 MNDTLLNAYSGIKTHQFGIDSLSNNIANVNTLGYRSNDPEFKTLFSSHLDALNAKSVVAN 60 Query: 57 ---SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---------------RGI 98 V LS + G ++ + E A +G WF + + Sbjct: 61 DRNYGVTGSGNVLSNKDGEYMPSEGEFHMAYQGKGWFVIGPNKNGEITINKDGFSKKQDN 120 Query: 99 ILTRDGRFKVTDDGSLVSASGKYPVL 124 LTR G F DG LV+ G Y Sbjct: 121 FLTRAGNFARDADGYLVTPEGYYVYG 146 Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 14/103 (13%), Positives = 34/103 (33%), Gaps = 16/103 (15%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS----------------GVTVKR 196 + +A +G+ + QG + + E+ ++ Sbjct: 500 EPVARIGILAFTNDQGLRKIGGNLYEMQEGTINGENRPLSGNPILGWDEEGKLKFGKIRH 559 Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +LE SN N+ + +I + + ++ + + EAI Sbjct: 560 KYLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAIS 602 >gi|317177697|dbj|BAJ55486.1| flagellar hook protein FlgE [Helicobacter pylori F16] Length = 605 Score = 75.7 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 56/146 (38%), Gaps = 22/146 (15%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56 M + + + + ++++N++N +T+G+R+ +F + + + ++ K Sbjct: 1 MNDTLLNAYSGIKTHQFGIDSLSNNIANVNTLGYRSNDPEFKTLFSSHLDALNAKSVVAN 60 Query: 57 ---SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---------------RGI 98 V LS + G ++ + E A +G WF + + Sbjct: 61 DRNYGVTGSGNVLSNKDGEYMPSEGEFHMAYQGKGWFVIGPNKNGEITINKDGFSKKQDN 120 Query: 99 ILTRDGRFKVTDDGSLVSASGKYPVL 124 LTR G F DG LV+ G Y Sbjct: 121 FLTRAGNFARDADGYLVTPEGYYVYG 146 Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 14/103 (13%), Positives = 34/103 (33%), Gaps = 16/103 (15%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS----------------GVTVKR 196 + +A +G+ + QG + + E+ ++ Sbjct: 500 EPVARIGILAFTNDQGLRKIGGNLYEMQEGTINGENRPLSGNPILGWDEEGKLKFGKIRH 559 Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +LE SN N+ + +I + + ++ + + EAI Sbjct: 560 KYLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAIS 602 >gi|270262401|ref|ZP_06190672.1| flagellar hook protein FlgE [Serratia odorifera 4Rx13] gi|270043085|gb|EFA16178.1| flagellar hook protein FlgE [Serratia odorifera 4Rx13] Length = 410 Score = 75.7 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 18/142 (12%), Positives = 41/142 (28%), Gaps = 5/142 (3%) Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162 F + S+ S S D + + +Q+ +++ + L + Sbjct: 267 SLSFAKSMQQSVSSDSVSKVSQDGYTAGEYTNFQINNDGSVVGIYSNQQTQLLGQIVLTN 326 Query: 163 VDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217 +G + ++ + G LE SN + E+ MI Sbjct: 327 FSNPEGLSSQGDNVWQETGASGQPRVGLAGSGGFGKLTSGALEASNVDLSQELVNMIVAQ 386 Query: 218 QKFNSITTLIDENEKSMLEAIR 239 + + S I + + + Sbjct: 387 RNYQSNAQTIKTQDSILQTLVS 408 Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 59/134 (44%), Gaps = 6/134 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ V F+++ Q V Sbjct: 2 AFSQAVSGLNAAATNLDVIGNNIANSATSGFKSGTVSFADMFA-----GSQVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 + + G+ T LD A+ + +F + GI +R+G+FK+ ++ +L + G Sbjct: 57 ITQNFKGGTTTGTSRALDVAISDNGFFRLQDKDGGIFYSRNGQFKLDENRNLTNMQGLQL 116 Query: 123 VLDMASVPIQIPQK 136 A+ Q+ Sbjct: 117 TGFPAAGSPPTIQQ 130 >gi|154252984|ref|YP_001413808.1| hypothetical protein Plav_2542 [Parvibaculum lavamentivorans DS-1] gi|154156934|gb|ABS64151.1| protein of unknown function DUF1078 domain protein [Parvibaculum lavamentivorans DS-1] Length = 454 Score = 75.7 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 48/137 (35%), Gaps = 12/137 (8%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 S + A L ++DN++N+ T+GF+ F ++V A + + V + Sbjct: 6 SMTTAITGIRAQSSALGHISDNIANSQTIGFKRTDTNFQDIVTASTSR-NHLPGAVLAAP 64 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALE-----------SPRGIILTRDGRFKVTDDG 112 + + GS ++ A+ G +F + TR G F + G Sbjct: 65 SFTNNVQGSIDASEVPTHMAINGSGFFVVSARVATVDGNPVFDNVNYYTRRGDFSMDKYG 124 Query: 113 SLVSASGKYPVLDMASV 129 LV+ G Sbjct: 125 YLVNGGGYTLQGLAIDP 141 Score = 65.3 bits (157), Expect = 7e-09, Method: Composition-based stats. Identities = 13/124 (10%), Positives = 37/124 (29%) Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 + + + + K +A + L + + S + + + Sbjct: 328 TVKTTELDQNGYPSGELVSIAVSENGRITGTYSNGKTVDLAQVSLATFNASDKLKKLDGT 387 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 + G + E SN + E ++I Q + + T ++ ++ + Sbjct: 388 AFAATQESGEPMLGGGGDIIASAREASNVDIADEFSKLIVTQQAYTAGTRIVTTADELIR 447 Query: 236 EAIR 239 E + Sbjct: 448 ETLN 451 >gi|332162901|ref|YP_004299478.1| Lateral flagellar hook protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325667131|gb|ADZ43775.1| Lateral flagellar hook protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330863351|emb|CBX73474.1| flagellar hook protein flgE [Yersinia enterocolitica W22703] Length = 397 Score = 75.7 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 35/132 (26%), Positives = 64/132 (48%), Gaps = 6/132 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SF+I A+ ++L+T+++N++N+ T GF++ + +F+ + Q + SG Sbjct: 2 SFSIANTGLSAVTEQLNTISNNIANSGTKGFKSGRTEFASMYAQ-----SQPLGVGVSGT 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122 K+ GS TG +D A+ G+ +F +++ TR G F +G LV+ASG Sbjct: 57 SQSIKKDGSIDRTGNAMDLAISGNGFFVVKNSSGDEAYTRAGMFTTDKNGVLVNASGMKL 116 Query: 123 VLDMASVPIQIP 134 A + Sbjct: 117 QGYPADAAGNVQ 128 Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 48/155 (30%), Gaps = 12/155 (7%) Query: 92 LESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQK 151 I T +F + + G +I ++ G+ + Sbjct: 250 DNYGIDITYTGTTQFHAEFLPAPSKSDGYTA---GTKNGERIENDGSVYATFSNGKQMLQ 306 Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANS 206 GK++ L + G + + S S T + G LE SN + Sbjct: 307 GKLV----LANFANPNGLATQNGTTWSVTSRSGAPLLGSPGTGLLGNIVAGALEASNVDL 362 Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 E+ ++ + + + T +I N+ M + + Sbjct: 363 TAELVGLMTAQRNYQANTKIISTNDSMMNALFQVL 397 >gi|210135099|ref|YP_002301538.1| flagellar hook protein FlgE [Helicobacter pylori P12] gi|210133067|gb|ACJ08058.1| flagellar hook protein [Helicobacter pylori P12] Length = 605 Score = 75.7 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 56/146 (38%), Gaps = 22/146 (15%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56 M + + + + ++++N++N +T+G+R+ +F + + + ++ K Sbjct: 1 MNDTLLNAYSGIKTHQFGIDSLSNNIANVNTLGYRSNDPEFKTLFSSHLDALNAKSVVAN 60 Query: 57 ---SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---------------RGI 98 V LS + G ++ + E A +G WF + + Sbjct: 61 DRNYGVTGSGNVLSNKDGEYMPSEGEFHMAYQGKGWFVIGPNKNGEMTINKDGFSKKQDN 120 Query: 99 ILTRDGRFKVTDDGSLVSASGKYPVL 124 LTR G F DG LV+ G Y Sbjct: 121 FLTRAGNFARDADGYLVTPEGYYVYG 146 Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 14/103 (13%), Positives = 34/103 (33%), Gaps = 16/103 (15%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS----------------GVTVKR 196 + +A +G+ + QG + + E+ ++ Sbjct: 500 EPVARIGILAFTNDQGLRKIGGNLYEMQEGTINGENRPLSGNPILGWDEEGKLKFGKIRH 559 Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +LE SN N+ + +I + + ++ + + EAI Sbjct: 560 KYLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAIS 602 >gi|315586853|gb|ADU41234.1| flagellar hook protein [Helicobacter pylori 35A] Length = 605 Score = 75.7 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 56/146 (38%), Gaps = 22/146 (15%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56 M + + + + ++++N++N +T+G+R+ +F + + + ++ K Sbjct: 1 MNDTLLNAYSGIKTHQFGIDSLSNNIANVNTLGYRSNDPEFKTLFSSHLDALNAKSVVAN 60 Query: 57 ---SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---------------RGI 98 V LS + G ++ + E A +G WF + + Sbjct: 61 DRNYGVTGSGNVLSNKDGEYMPSEGEFHMAYQGKGWFVIGPNKNGEITINKDGFSKKQDN 120 Query: 99 ILTRDGRFKVTDDGSLVSASGKYPVL 124 LTR G F DG LV+ G Y Sbjct: 121 FLTRAGNFARDADGYLVTPEGYYVYG 146 Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 14/103 (13%), Positives = 34/103 (33%), Gaps = 16/103 (15%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS----------------GVTVKR 196 + +A +G+ + QG + + E+ ++ Sbjct: 500 EPVARIGILAFTNDQGLRKIGGNLYEMQEGTINGENRPLSGNPILGWDEEGKLKFGKIRH 559 Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +LE SN N+ + +I + + ++ + + EAI Sbjct: 560 KYLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAIS 602 >gi|217034408|ref|ZP_03439822.1| hypothetical protein HP9810_884g13 [Helicobacter pylori 98-10] gi|216943139|gb|EEC22611.1| hypothetical protein HP9810_884g13 [Helicobacter pylori 98-10] Length = 605 Score = 75.7 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 56/146 (38%), Gaps = 22/146 (15%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56 M + + + + ++++N++N +T+G+R+ +F + + + ++ K Sbjct: 1 MNDTLLNAYSGIKTHQFGIDSLSNNIANVNTLGYRSNDPEFKTLFSSHLDALNAKSVVAN 60 Query: 57 ---SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---------------RGI 98 V LS + G ++ + E A +G WF + + Sbjct: 61 DRNYGVTGSGNVLSNKDGEYMPSEGEFHMAYQGKGWFVIGPNKNGEITINKDGFSKKQDN 120 Query: 99 ILTRDGRFKVTDDGSLVSASGKYPVL 124 LTR G F DG LV+ G Y Sbjct: 121 FLTRAGNFARDADGYLVTPEGYYVYG 146 Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 14/103 (13%), Positives = 34/103 (33%), Gaps = 16/103 (15%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS----------------GVTVKR 196 + +A +G+ + QG + + E+ ++ Sbjct: 500 EPVARIGILAFTNDQGLRKIGGNLYEMQEGTINGENRPLSGNPILGWDEEGKLKFGKIRH 559 Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +LE SN N+ + +I + + ++ + + EAI Sbjct: 560 KYLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAIS 602 >gi|300936126|ref|ZP_07151065.1| flagellar hook protein FlgE [Escherichia coli MS 21-1] gi|300458704|gb|EFK22197.1| flagellar hook protein FlgE [Escherichia coli MS 21-1] Length = 400 Score = 75.7 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 40/187 (21%), Positives = 69/187 (36%), Gaps = 6/187 (3%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66 I A+ ++L +++N++N TVG++++ +FS + Q + +G Sbjct: 5 IAATGLNAVNEQLDGISNNIANAGTVGYKSMTTQFSAMYA-----GSQAMGVSMAGTAQS 59 Query: 67 SKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125 GS +STG LD A+ D +F +S I TR G F+ +G +V+ASG Y Sbjct: 60 ISRGGSLVSTGNALDLAINDDGFFVTCDSAGNISYTRAGSFETDKNGYIVNASGAYLQGY 119 Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185 + + G I + T R + N Sbjct: 120 PVDDTGTLQTGTVTDIQIKTGNIPAQASSSLTFTANFDASDDAIDRTTVPFDATNSSSYT 179 Query: 186 LEDLSGV 192 + V Sbjct: 180 DSYTTTV 186 Score = 68.4 bits (165), Expect = 8e-10, Method: Composition-based stats. Identities = 25/194 (12%), Positives = 55/194 (28%), Gaps = 10/194 (5%) Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113 Q + + +TG F ++ I LT D Sbjct: 211 QYTFDGQQQTGVPATTLTFDPNTGKLTSPTTPQTIEFQTDAAAPIDLTVDYSTCTQYGSE 270 Query: 114 L-VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172 V+ + +Q+ +++ GE +G+V+ L + G Sbjct: 271 FSVTTNAADGYASATQNGVQVDDDGKVYATYSNGERMLQGQVV----LATFPNENGLEAV 326 Query: 173 ENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 + T+ G LE SN + E+ ++ + + + T +I Sbjct: 327 SGTAWVQTGESGTPLIGVPGSGTCGTLSSGVLESSNVDITSELVNLMTAQRNYQANTKVI 386 Query: 228 DENEKSMLEAIRNI 241 + + + + Sbjct: 387 ATSTQLDDALFQAM 400 >gi|167467491|ref|ZP_02332195.1| flagellar hook protein FlgE [Yersinia pestis FV-1] Length = 314 Score = 75.7 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 13/123 (10%), Positives = 35/123 (28%), Gaps = 5/123 (4%) Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 + + +Q+ +++ + + + +G ++ Sbjct: 190 QNQTGYAAGEFTGFQINSDGSVVGTYSNQQTQLLGQIVMVNFSNPEGLSSEGDNVWKETQ 249 Query: 182 PPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 T+ G LE SN + E+ MI + + S I ++ + Sbjct: 250 SSGNPTLGTAGSGGFGTLTSGALESSNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILQT 309 Query: 237 AIR 239 + Sbjct: 310 LVS 312 >gi|254779511|ref|YP_003057617.1| flagellar hook protein FlgE [Helicobacter pylori B38] gi|254001423|emb|CAX29418.1| Flagellar hook protein FlgE [Helicobacter pylori B38] Length = 605 Score = 75.7 bits (184), Expect = 6e-12, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 56/146 (38%), Gaps = 22/146 (15%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56 M + + + + ++++N++N +T+G+R+ +F + + + ++ K Sbjct: 1 MNDTLLNAYSGIKTHQFGIDSLSNNIANVNTLGYRSNDPEFKTLFSSHLDALNAKSVVAN 60 Query: 57 ---SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---------------RGI 98 V LS + G ++ + E A +G WF + + Sbjct: 61 DRNYGVTGSGNVLSNKDGEYMPSEGEFHMAYQGKGWFVIGPNKNGEMTINKDGFSKKQDN 120 Query: 99 ILTRDGRFKVTDDGSLVSASGKYPVL 124 LTR G F DG LV+ G Y Sbjct: 121 FLTRAGNFARDADGYLVTPEGYYVYG 146 Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 14/103 (13%), Positives = 34/103 (33%), Gaps = 16/103 (15%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS----------------GVTVKR 196 + +A +G+ + QG + + E+ ++ Sbjct: 500 EPVARIGILAFTNDQGLRKIGGNLYEMQEGTINGENRPLSGNPILGWDEEGKLKFGKIRH 559 Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +LE SN N+ + +I + + ++ + + EAI Sbjct: 560 KYLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAIS 602 >gi|82544458|ref|YP_408405.1| flagellar hook protein FlgE [Shigella boydii Sb227] gi|81245869|gb|ABB66577.1| hook protein [Shigella boydii Sb227] gi|320186977|gb|EFW61690.1| Flagellar hook protein FlgE [Shigella flexneri CDC 796-83] gi|332094030|gb|EGI99082.1| flagellar hook protein flgE [Shigella boydii 3594-74] Length = 402 Score = 75.7 bits (184), Expect = 6e-12, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 71/195 (36%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ +LV+ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q+ K T + S + + N Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNAD 176 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 177 SYNKKGSVTVFDSQG 191 Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 21/173 (12%), Positives = 55/173 (31%), Gaps = 6/173 (3%) Query: 72 SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPI 131 F + GT +D A+ + + T F + + + + + Sbjct: 229 EFNANGTLVDGAMANNIATGAINGAEPA-TFSLSFLNSMQQNTGANNIVATPQNGYKPGD 287 Query: 132 QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PL 186 + + +++ +++ + L + ++G ++ S Sbjct: 288 LVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTA 347 Query: 187 EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + T+ G LE SN + E+ MI + + S I ++ + + Sbjct: 348 GTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400 >gi|317011118|gb|ADU84865.1| flagellar hook protein FlgE [Helicobacter pylori SouthAfrica7] Length = 605 Score = 75.7 bits (184), Expect = 6e-12, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 56/146 (38%), Gaps = 22/146 (15%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56 M + + + + ++++N++N +T+G+R+ +F + + + ++ K Sbjct: 1 MNDTLLNAYSGIKTHQFGIDSLSNNIANVNTLGYRSNDPEFKTLFSSHLDALNAKSVVAN 60 Query: 57 ---SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---------------RGI 98 V LS + G ++ + E A +G WF + + Sbjct: 61 DRNYGVTGSGNVLSNKDGEYMPSEGEFHMAYQGKGWFVIGPNKNGEMTINKDGFSKKQDN 120 Query: 99 ILTRDGRFKVTDDGSLVSASGKYPVL 124 LTR G F DG LV+ G Y Sbjct: 121 FLTRAGNFARDADGYLVTPEGYYVYG 146 Score = 66.8 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 15/103 (14%), Positives = 37/103 (35%), Gaps = 16/103 (15%) Query: 153 KVIATMGLYSVDMSQGFVRRENS----------GISPNIPPTPLEDL------SGVTVKR 196 + +A +G+ + QG + + G + + P+ ++ Sbjct: 500 EPVARIGILAFTNDQGLRKIGGNVYEMQESTINGENRPLSGNPILGWDEEGKLKFGKIRH 559 Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +LE SN N+ + +I + + ++ + + EAI Sbjct: 560 KYLETSNVNAGNALTNLILMQRGYSMNAKAFGAGDDMIKEAIS 602 >gi|330943208|gb|EGH45615.1| flagellar hook protein FlgE [Pseudomonas syringae pv. pisi str. 1704B] Length = 565 Score = 75.7 bits (184), Expect = 6e-12, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 47/118 (39%), Gaps = 3/118 (2%) Query: 19 LSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFI---S 75 + +N++N T+GF++ + +FS + + + Q + + S Sbjct: 1 MEVAGNNIANVGTLGFKSSRAQFSALYASAQLGAGQHAVGDGVRLASVQQNFNQGETVIS 60 Query: 76 TGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQI 133 +G LD ++G+ +F + + TR G F +V + G A+ +I Sbjct: 61 SGNALDMRIQGNGFFVVSDQGSLAYTRAGAFLKDAANFVVDSDGGRLQGYAANDKGEI 118 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 21/129 (16%), Positives = 40/129 (31%), Gaps = 5/129 (3%) Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 ++S +D S + + G + K I + L S G R ++ Sbjct: 435 TSSRSAAYVDGHSAGELKSLEVGRDGILRAGFTNGMTKSIGQVMLASFANPHGLQPRSDT 494 Query: 176 GISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + E + ++ G LE SN E+ +I + + + I Sbjct: 495 RWTATADSGVAEYDVPGVGTLGSIVSGALEGSNVVLADELIALIQAQTAYQANSKAISTE 554 Query: 231 EKSMLEAIR 239 M I+ Sbjct: 555 VTLMQTLIQ 563 >gi|91210228|ref|YP_540214.1| flagellar hook protein FlgE [Escherichia coli UTI89] gi|117623262|ref|YP_852175.1| flagellar hook protein FlgE [Escherichia coli APEC O1] gi|215486285|ref|YP_002328716.1| flagellar hook protein FlgE [Escherichia coli O127:H6 str. E2348/69] gi|218557958|ref|YP_002390871.1| flagellar hook protein FlgE [Escherichia coli S88] gi|237706938|ref|ZP_04537419.1| flagellar hook protein FlgE [Escherichia sp. 3_2_53FAA] gi|312968850|ref|ZP_07783057.1| flagellar hook protein flgE [Escherichia coli 2362-75] gi|91071802|gb|ABE06683.1| flagellar biosynthesis, hook protein [Escherichia coli UTI89] gi|115512386|gb|ABJ00461.1| flagellar biosynthesis, hook protein FlgE [Escherichia coli APEC O1] gi|215264357|emb|CAS08714.1| flagellar hook protein [Escherichia coli O127:H6 str. E2348/69] gi|218364727|emb|CAR02417.1| flagellar hook protein [Escherichia coli S88] gi|226898148|gb|EEH84407.1| flagellar hook protein FlgE [Escherichia sp. 3_2_53FAA] gi|294491293|gb|ADE90049.1| flagellar hook protein FlgE [Escherichia coli IHE3034] gi|307627454|gb|ADN71758.1| flagellar hook protein FlgE [Escherichia coli UM146] gi|312286252|gb|EFR14165.1| flagellar hook protein flgE [Escherichia coli 2362-75] gi|315287369|gb|EFU46780.1| flagellar hook protein FlgE [Escherichia coli MS 110-3] gi|323953238|gb|EGB49104.1| fagellar hook-basal body protein [Escherichia coli H252] gi|323957900|gb|EGB53612.1| fagellar hook-basal body protein [Escherichia coli H263] Length = 401 Score = 75.7 bits (184), Expect = 6e-12, Method: Composition-based stats. Identities = 34/195 (17%), Positives = 73/195 (37%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ +LV+ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q+ K T + S + N+ + N Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDSLPSVNAFDASNAD 176 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 177 SYNKKGSVTVFDSQG 191 Score = 72.2 bits (175), Expect = 6e-11, Method: Composition-based stats. Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + + + +++ +++ + L + ++G ++ S Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 337 Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + T+ G LE SN + E+ MI + + S I ++ + Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397 Query: 238 IR 239 + Sbjct: 398 VN 399 >gi|82777309|ref|YP_403658.1| flagellar hook protein FlgE [Shigella dysenteriae Sd197] gi|309788143|ref|ZP_07682749.1| flagellar hook protein flgE [Shigella dysenteriae 1617] gi|81241457|gb|ABB62167.1| hook protein [Shigella dysenteriae Sd197] gi|308923995|gb|EFP69496.1| flagellar hook protein flgE [Shigella dysenteriae 1617] Length = 402 Score = 75.7 bits (184), Expect = 6e-12, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 71/195 (36%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ +LV+ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q+ K T + S + + N Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNAD 176 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 177 SYNKKGSVTVFDSQG 191 Score = 73.0 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 21/173 (12%), Positives = 55/173 (31%), Gaps = 6/173 (3%) Query: 72 SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPI 131 F + GT +D A+ + + T F + + + + + Sbjct: 229 KFNANGTLVDGAMANNIATGAINGAEPA-TFSLSFPNSMQQNTGANNIVATTQNGYKPGD 287 Query: 132 QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PL 186 + + +++ +++ + L + ++G ++ S Sbjct: 288 LVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTA 347 Query: 187 EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + T+ G LE SN + E+ MI + + S I ++ + + Sbjct: 348 GTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400 >gi|261838284|gb|ACX98050.1| flagellar hook protein [Helicobacter pylori 51] Length = 605 Score = 75.7 bits (184), Expect = 6e-12, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 56/146 (38%), Gaps = 22/146 (15%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56 M + + + + ++++N++N +T+G+R+ +F + + + ++ K Sbjct: 1 MNDTLLNAYSGIKTHQFGIDSLSNNIANVNTLGYRSNDPEFKTLFSSHLDALNAKSVVAN 60 Query: 57 ---SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---------------RGI 98 V LS + G ++ + E A +G WF + + Sbjct: 61 DRNYGVTGSGNVLSNKDGEYMPSEGEFHMAYQGKGWFVIGPNKNGEITINKDGFSKKQDN 120 Query: 99 ILTRDGRFKVTDDGSLVSASGKYPVL 124 LTR G F DG LV+ G Y Sbjct: 121 FLTRAGNFARDADGYLVTPEGYYVYG 146 Score = 66.0 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 14/103 (13%), Positives = 34/103 (33%), Gaps = 16/103 (15%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS----------------GVTVKR 196 + +A +G+ + QG + + E+ ++ Sbjct: 500 EPVARIGILAFTNDQGLRKIGGNLYEMQEGTINGENRPLSGNPILGWDEEGKLKFGKIRH 559 Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +LE SN N+ + +I + + ++ + + EAI Sbjct: 560 KYLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAIS 602 >gi|30062613|ref|NP_836784.1| flagellar hook protein FlgE [Shigella flexneri 2a str. 2457T] gi|161485924|ref|NP_706995.2| flagellar hook protein FlgE [Shigella flexneri 2a str. 301] gi|30040859|gb|AAP16590.1| flagellar hook protein FlgE [Shigella flexneri 2a str. 2457T] gi|313650473|gb|EFS14880.1| flagellar hook protein flgE [Shigella flexneri 2a str. 2457T] gi|332758235|gb|EGJ88558.1| flagellar hook protein flgE [Shigella flexneri 4343-70] gi|333005591|gb|EGK25109.1| flagellar hook protein flgE [Shigella flexneri K-218] Length = 402 Score = 75.7 bits (184), Expect = 6e-12, Method: Composition-based stats. Identities = 31/195 (15%), Positives = 70/195 (35%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ +L++ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLLNTQGLQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + Q+ K T + S + + N Sbjct: 117 TGYPVTGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNAD 176 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 177 SYNKKGSVTVFDSQG 191 Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats. Identities = 21/173 (12%), Positives = 55/173 (31%), Gaps = 6/173 (3%) Query: 72 SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPI 131 F + GT +D A+ + + T F + + + + + Sbjct: 229 EFNANGTLVDGAMANNIATGAINGAEPA-TFSLSFLNSMQQNTGANNIVATTQNGYKPGD 287 Query: 132 QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PL 186 + + +++ +++ + L + ++G ++ S Sbjct: 288 LVSYQINDDGTVVGNNSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTA 347 Query: 187 EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + T+ G LE SN + E+ MI + + S I ++ + + Sbjct: 348 GTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYKSNAQTIKTQDQILNTRVN 400 >gi|324113871|gb|EGC07845.1| fagellar hook-basal body protein [Escherichia fergusonii B253] gi|325497616|gb|EGC95475.1| flagellar hook protein FlgE [Escherichia fergusonii ECD227] Length = 401 Score = 75.7 bits (184), Expect = 6e-12, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 72/195 (36%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ +LV+ G Sbjct: 57 ITQDFTDGTTTNTGRGLDIAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q+ K T + S + + + N Sbjct: 117 TGYPAAGTPPTIQQGANPTNISIPNTLMAAKTTTTAAMQINLNSSDPLPTVKAFDASNAD 176 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 177 SYNKKGSVTVFDSQG 191 Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + + + +++ +++ + L + ++G ++ S Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQA 337 Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + T+ G LE SN + E+ MI + + S I ++ + Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397 Query: 238 IR 239 + Sbjct: 398 VN 399 >gi|317009564|gb|ADU80144.1| flagellar hook protein FlgE [Helicobacter pylori India7] Length = 605 Score = 75.7 bits (184), Expect = 6e-12, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 56/146 (38%), Gaps = 22/146 (15%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56 M + + + + ++++N++N +T+G+R+ +F + + + ++ K Sbjct: 1 MNDTLLNAYSGIKTHQFGIDSLSNNIANVNTLGYRSNDPEFKTLFSSHLDALNAKSVVAN 60 Query: 57 ---SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---------------RGI 98 V LS + G ++ + E A +G WF + + Sbjct: 61 DRNYGVTGSGNVLSNKDGEYMPSEGEFHMAYQGKGWFVIGPNKNGEMTINKDGFSKKQDN 120 Query: 99 ILTRDGRFKVTDDGSLVSASGKYPVL 124 LTR G F DG LV+ G Y Sbjct: 121 FLTRAGNFARDADGYLVTPEGYYVYG 146 Score = 66.0 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 14/103 (13%), Positives = 34/103 (33%), Gaps = 16/103 (15%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS----------------GVTVKR 196 + +A +G+ + QG + + E+ ++ Sbjct: 500 EPVARIGILAFTNDQGLRKIGGNLYEMQEGTINGENRPLSGNPILGWDEEGKLKFGKIRH 559 Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +LE SN N+ + +I + + ++ + + EAI Sbjct: 560 KYLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAIS 602 >gi|293605003|ref|ZP_06687399.1| flagellar hook protein FlgE [Achromobacter piechaudii ATCC 43553] gi|292816608|gb|EFF75693.1| flagellar hook protein FlgE [Achromobacter piechaudii ATCC 43553] Length = 489 Score = 75.7 bits (184), Expect = 6e-12, Method: Composition-based stats. Identities = 33/155 (21%), Positives = 64/155 (41%), Gaps = 7/155 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 F GL+ A Q L + +N++N+ TVGF++ F++V + + + V Sbjct: 2 GFGQGLSGLNAAAQNLDVIGNNIANSGTVGFKSATASFADVYASSRVGL-----GVKVAA 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRG--IILTRDGRFKVTDDGSLVSASGKY 121 VG+ G E D A++G + + ++ +R+G F V + +V+A G Sbjct: 57 INQRFTVGTVQGGGGEYDIAIDGAKGMFRLTDQSGAVMYSRNGEFLVDKNNFIVNAQGYR 116 Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156 A P + ++ + + G +A Sbjct: 117 LTGYPAGAIGANPVELQLPTANVAPKATATGTTVA 151 Score = 71.1 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 15/98 (15%), Positives = 31/98 (31%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLED 201 + + +V+ + L QG N+ + T V E Sbjct: 390 YTNGETQVVGNIVLADFSNLQGLQPVGNNAWTETSASGQPILGQPGTNGMSRVVGQATEA 449 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ MI + + + + I ++ M + Sbjct: 450 SNVDMSKELVNMIIAQRTYQANSQTIKTQDEIMQVLMN 487 >gi|200390428|ref|ZP_03217039.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199602873|gb|EDZ01419.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 403 Score = 75.3 bits (183), Expect = 6e-12, Method: Composition-based stats. Identities = 34/195 (17%), Positives = 71/195 (36%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SF+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 SFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ +LV+ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGMQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q+ K T + S V + + Sbjct: 117 TGYPATGTPPTIQQGANPAPITIPNTLMAAKSTTTASMQINLNSTDPVPSKTPFSVSDAD 176 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 177 SYNKKGTVTVYDSQG 191 Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 13/122 (10%), Positives = 39/122 (31%), Gaps = 5/122 (4%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + + + +++ +V+ + L + ++G + ++ + Sbjct: 280 NQNGYKPGDLVSYQINNDGTVVGNYSNEQEQVLGQIVLANFANNEGLASQGDNVWAATQA 339 Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + + G LE SN + E+ MI + + S I ++ + Sbjct: 340 SGVALLGTAGSGNFGKLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 399 Query: 238 IR 239 + Sbjct: 400 VN 401 >gi|301023263|ref|ZP_07187060.1| flagellar hook protein FlgE [Escherichia coli MS 69-1] gi|300397108|gb|EFJ80646.1| flagellar hook protein FlgE [Escherichia coli MS 69-1] Length = 401 Score = 75.3 bits (183), Expect = 6e-12, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 72/195 (36%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ +LV+ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q+ K T + S + + + N Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPSVKAFDASNAD 176 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 177 SYNKKGSVTVFDSQG 191 Score = 72.6 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + + + +++ +++ + L + ++G ++ S Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 337 Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + T+ G LE SN + E+ MI + + S I ++ + Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397 Query: 238 IR 239 + Sbjct: 398 VN 399 >gi|332673746|gb|AEE70563.1| flagellar hook [Helicobacter pylori 83] Length = 605 Score = 75.3 bits (183), Expect = 6e-12, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 56/146 (38%), Gaps = 22/146 (15%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56 M + + + + ++++N++N +T+G+R+ +F + + + ++ K Sbjct: 1 MNDTLLNAYSGIKTHQFGIDSLSNNIANVNTLGYRSNDPEFKTLFSSHLDALNAKSVVAN 60 Query: 57 ---SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---------------RGI 98 V LS + G ++ + E A +G WF + + Sbjct: 61 DRNYGVTGSGNVLSNKDGEYMPSEGEFHMAYQGKGWFVIGPNKNGEMTINKDGFSKKQDN 120 Query: 99 ILTRDGRFKVTDDGSLVSASGKYPVL 124 LTR G F DG LV+ G Y Sbjct: 121 FLTRAGNFARDADGYLVTPEGYYVYG 146 Score = 66.0 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 14/103 (13%), Positives = 34/103 (33%), Gaps = 16/103 (15%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS----------------GVTVKR 196 + +A +G+ + QG + + E+ ++ Sbjct: 500 EPVARIGILAFTNDQGLRKIGGNLYEMQEGTINGENRPLSGNPILGWDEEGKLKFGKIRH 559 Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +LE SN N+ + +I + + ++ + + EAI Sbjct: 560 KYLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAIS 602 >gi|153948570|ref|YP_001399634.1| flagellar hook protein FlgE [Yersinia pseudotuberculosis IP 31758] gi|152960065|gb|ABS47526.1| flagellar hook protein flgE [Yersinia pseudotuberculosis IP 31758] Length = 402 Score = 75.3 bits (183), Expect = 6e-12, Method: Composition-based stats. Identities = 35/132 (26%), Positives = 57/132 (43%), Gaps = 6/132 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SF+I A A ++L+T+++N++N+ T GF+ + +F+ + Q + SG Sbjct: 2 SFSIANTALNAHTEQLNTISNNIANSATKGFKASRTEFASMYAQ-----SQPLGVTVSGV 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122 + G TG LD A+ G +F + TR G F+ DG LV+ G Sbjct: 57 SQNIGKDGQKDKTGMGLDLAISGGGFFVVRENSGDKAYTRAGMFRSDVDGYLVNGQGMKL 116 Query: 123 VLDMASVPIQIP 134 A I Sbjct: 117 QGYPADDAGNIQ 128 Score = 68.0 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 22/140 (15%), Positives = 49/140 (35%), Gaps = 9/140 (6%) Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 + G + + +I ++ GE +GKV+ L + Sbjct: 267 TQLNQGFTTTRNKSDGYTSGVKNGERIESDGSVYATFSNGERMLQGKVV----LANFASP 322 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFN 221 G V + + S + + T ++ G LE+SN + E+ ++ + + Sbjct: 323 SGLVTQNGTSWSESNKSGAALLGTPGTGLLGSLESGALENSNVDITAELVGLMTAQRNYQ 382 Query: 222 SITTLIDENEKSMLEAIRNI 241 + T +I N+ M + + Sbjct: 383 ASTKIISTNDSMMNALFQVL 402 >gi|167567750|ref|ZP_02360666.1| flagellar hook protein flgE [Burkholderia oklahomensis EO147] Length = 395 Score = 75.3 bits (183), Expect = 6e-12, Method: Composition-based stats. Identities = 39/197 (19%), Positives = 76/197 (38%), Gaps = 7/197 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SFNI L+ A+ +L+T++ N++NT T GF++ + F+ +V + + S + Sbjct: 2 SFNIALSGINAVNNQLNTISHNIANTGTYGFKSGRANFATMVAGAQPNGTYIGSITQNVG 61 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122 GS + TG LD A++ D +F + ++ TR G F+ DG +V G+ Sbjct: 62 IG-----GSIMKTGRGLDAAIQQDGFFVTKDADGSLLYTRVGIFQRAADGYMVDGFGRRV 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ + Q + + + ++ + + S Sbjct: 117 QGYAANGVLGDLQVPNTVEPAKASDSIEYAGNLSADWKVP-KNPKFDKDDDTSFNHSVST 175 Query: 183 PTPLEDLSGVTVKRGFL 199 V + F+ Sbjct: 176 TVYDSLGRKHVVTQYFV 192 Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 20/148 (13%), Positives = 49/148 (33%), Gaps = 10/148 (6%) Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-----EISQKGKVIATM 158 G+ V + + V G + ++ EKG + + + + T+ Sbjct: 248 GKLVVNVNYTGVMQVGGDSSTTTNNQNGYAAGTPGEPSIDEKGNVVVQYSNGQKRTVGTV 307 Query: 159 GLYSVDMSQGFVRRENSGI-SPNIPPTP----LEDLSGVTVKRGFLEDSNANSMYEMGQM 213 L + + G ++ + P + LE SNA+ E+ M Sbjct: 308 ALAAFASADGLTAVGDTAWKASTASGNPLYGTPGSGMFSKLATASLEMSNADVTRELVDM 367 Query: 214 IHLTQKFNSITTLIDENEKSMLEAIRNI 241 + + + + + +I + M ++ + Sbjct: 368 MSAQRNYQANSKVIATENQMMQSLMQAL 395 >gi|16129039|ref|NP_415594.1| flagellar hook protein [Escherichia coli str. K-12 substr. MG1655] gi|89107922|ref|AP_001702.1| flagellar hook protein [Escherichia coli str. K-12 substr. W3110] gi|170080727|ref|YP_001730047.1| flagellar hook protein [Escherichia coli str. K-12 substr. DH10B] gi|188492271|ref|ZP_02999541.1| flagellar hook protein FlgE [Escherichia coli 53638] gi|238900330|ref|YP_002926126.1| flagellar hook protein [Escherichia coli BW2952] gi|256023226|ref|ZP_05437091.1| flagellar hook protein FlgE [Escherichia sp. 4_1_40B] gi|300950171|ref|ZP_07164116.1| flagellar hook protein FlgE [Escherichia coli MS 116-1] gi|300954384|ref|ZP_07166838.1| flagellar hook protein FlgE [Escherichia coli MS 175-1] gi|301029709|ref|ZP_07192763.1| flagellar hook protein FlgE [Escherichia coli MS 196-1] gi|301644988|ref|ZP_07244954.1| flagellar hook protein FlgE [Escherichia coli MS 146-1] gi|307137711|ref|ZP_07497067.1| flagellar hook protein FlgE [Escherichia coli H736] gi|331641620|ref|ZP_08342755.1| flagellar hook protein FlgE [Escherichia coli H736] gi|2494529|sp|P75937|FLGE_ECOLI RecName: Full=Flagellar hook protein flgE gi|1787316|gb|AAC74160.1| flagellar hook protein [Escherichia coli str. K-12 substr. MG1655] gi|85674830|dbj|BAA35885.2| flagellar hook protein [Escherichia coli str. K12 substr. W3110] gi|169888562|gb|ACB02269.1| flagellar hook protein [Escherichia coli str. K-12 substr. DH10B] gi|188487470|gb|EDU62573.1| flagellar hook protein FlgE [Escherichia coli 53638] gi|238861108|gb|ACR63106.1| flagellar hook protein [Escherichia coli BW2952] gi|260449784|gb|ACX40206.1| flagellar basal body FlaE domain protein [Escherichia coli DH1] gi|299877397|gb|EFI85608.1| flagellar hook protein FlgE [Escherichia coli MS 196-1] gi|300318620|gb|EFJ68404.1| flagellar hook protein FlgE [Escherichia coli MS 175-1] gi|300450518|gb|EFK14138.1| flagellar hook protein FlgE [Escherichia coli MS 116-1] gi|301076717|gb|EFK91523.1| flagellar hook protein FlgE [Escherichia coli MS 146-1] gi|309701348|emb|CBJ00649.1| flagellar hook protein FlgE [Escherichia coli ETEC H10407] gi|315135708|dbj|BAJ42867.1| flagellar hook protein FlgE [Escherichia coli DH1] gi|315618246|gb|EFU98836.1| flagellar hook protein flgE [Escherichia coli 3431] gi|323937816|gb|EGB34080.1| fagellar hook-basal body protein [Escherichia coli E1520] gi|323942545|gb|EGB38712.1| fagellar hook-basal body protein [Escherichia coli E482] gi|331038418|gb|EGI10638.1| flagellar hook protein FlgE [Escherichia coli H736] gi|332342622|gb|AEE55956.1| flagellar hook protein FlgE [Escherichia coli UMNK88] Length = 402 Score = 75.3 bits (183), Expect = 6e-12, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 71/195 (36%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ +LV+ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q+ K T + S + + N Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNAD 176 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 177 SYNKKGSVTVFDSQG 191 Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 21/173 (12%), Positives = 55/173 (31%), Gaps = 6/173 (3%) Query: 72 SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPI 131 F + GT +D A+ + + T F + + + + + Sbjct: 229 EFNANGTLVDGAMANNIATGAINGAEPA-TFSLSFLNSMQQNTGANNIVATTQNGYKPGD 287 Query: 132 QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PL 186 + + +++ +++ + L + ++G ++ S Sbjct: 288 LVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTA 347 Query: 187 EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + T+ G LE SN + E+ MI + + S I ++ + + Sbjct: 348 GTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400 >gi|291334032|gb|ADD93707.1| flagellar basal body FlaE domain protein [uncultured marine bacterium MedDCM-OCT-S04-C749] Length = 210 Score = 75.3 bits (183), Expect = 6e-12, Method: Composition-based stats. Identities = 39/201 (19%), Positives = 66/201 (32%), Gaps = 31/201 (15%) Query: 70 VGSFISTGTELDFALEGDAWFALESPRGII--LTRDGRFKVTDDGSLVSASGKYPVLDM- 126 GS I T D AL G+ F L++P + TR+G F + D G L S++ + + Sbjct: 10 QGSIIDTDNRTDLALLGNGMFILKNPNSVTPSFTRNGTFSLDDAGFLRSSNDAFVMGSPL 69 Query: 127 -----------------------ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 + E ++ ++T+ L Sbjct: 70 VDGLFGPTPAELDGLSPIQIQLKREDVPMSELRILGDGRIEASYGTEVSYPVSTVALGVF 129 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 + G + + ++K G LE SN N E+ MI Q Sbjct: 130 SNNNGLKELGGGIYAQTDKSGAVNLGAPADLGYASLKSGGLEASNVNITDELTAMIKAQQ 189 Query: 219 KFNSITTLIDENEKSMLEAIR 239 +FN L+ N + + + R Sbjct: 190 QFNGSARLMQTNSEMVEKLTR 210 >gi|207092210|ref|ZP_03239997.1| flagellar hook protein FlgE [Helicobacter pylori HPKX_438_AG0C1] Length = 605 Score = 75.3 bits (183), Expect = 6e-12, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 56/146 (38%), Gaps = 22/146 (15%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56 M + + + + ++++N++N +T+G+R+ +F + + + ++ K Sbjct: 1 MNDTLLNAYSGIKTHQFGIDSLSNNIANVNTLGYRSNDPEFKTLFSSHLDALNAKSVVAN 60 Query: 57 ---SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---------------RGI 98 V LS + G ++ + E A +G WF + + Sbjct: 61 DRNYGVTGSGNTLSNKDGEYMPSEGEFHMAYQGKGWFVIGPNKNGEMTINKDGFSKKQDN 120 Query: 99 ILTRDGRFKVTDDGSLVSASGKYPVL 124 LTR G F DG LV+ G Y Sbjct: 121 FLTRAGNFARDADGYLVTPEGYYVYG 146 Score = 65.7 bits (158), Expect = 5e-09, Method: Composition-based stats. Identities = 14/103 (13%), Positives = 34/103 (33%), Gaps = 16/103 (15%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS----------------GVTVKR 196 + +A +G+ + QG + + E+ ++ Sbjct: 500 EPVARIGILAFTNDQGLRKIGGNLYEMQEGTINGENRPLSGNPILGWDEEGKLKFGKIRH 559 Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +LE SN N+ + +I + + ++ + + EAI Sbjct: 560 KYLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAIS 602 >gi|170681389|ref|YP_001742373.1| lateral flagellar hook protein LfgE [Escherichia coli SMS-3-5] gi|170519107|gb|ACB17285.1| lateral flagellar hook protein LfgE [Escherichia coli SMS-3-5] Length = 400 Score = 75.3 bits (183), Expect = 6e-12, Method: Composition-based stats. Identities = 40/187 (21%), Positives = 69/187 (36%), Gaps = 6/187 (3%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66 I A+ ++L +++N++N TVG++++ +FS + Q + +G Sbjct: 5 IAATGLNAVNEQLDGISNNIANAGTVGYKSMTTQFSAMYA-----GSQAMGVSVAGTAQS 59 Query: 67 SKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125 GS +STG LD A+ D +F +S I TR G F+ +G +V+ASG Y Sbjct: 60 ISRGGSLVSTGNALDLAINDDGFFVTCDSAGNISYTRAGSFETDKNGYIVNASGAYLQGY 119 Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185 + + G I + T R + N Sbjct: 120 PVDDTGTLQTGTVTDIQIKTGNIPAQASSSLTFTANFDASDDAIDRTTVPFDATNSSSYT 179 Query: 186 LEDLSGV 192 + V Sbjct: 180 DSYTTTV 186 Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats. Identities = 25/194 (12%), Positives = 55/194 (28%), Gaps = 10/194 (5%) Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113 Q + + +TG F ++ I LT D Sbjct: 211 QYTFDGQQQTGVPATTLTFDPNTGKLTSPTTPQTIEFQTDAAAPIDLTVDYSTCTQYGSE 270 Query: 114 L-VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172 V+ + +Q+ +++ GE +G+V+ L + G Sbjct: 271 FSVTTNAANGYASATQNGVQVDDDGKVYATYSNGERMLQGQVV----LATFPNENGLEAV 326 Query: 173 ENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 + T+ G LE SN + E+ ++ + + + T +I Sbjct: 327 SGTAWVQTGESGTPLIGVPGSGSCGTLSSGVLESSNVDITSELVNLMTAQRNYQANTKVI 386 Query: 228 DENEKSMLEAIRNI 241 + + + + Sbjct: 387 ATSTQLDDALFQAM 400 >gi|307310146|ref|ZP_07589796.1| fagellar hook-basal body protein [Escherichia coli W] gi|306909864|gb|EFN40358.1| fagellar hook-basal body protein [Escherichia coli W] gi|315060354|gb|ADT74681.1| flagellar hook protein [Escherichia coli W] gi|320200972|gb|EFW75556.1| Flagellar hook protein FlgE [Escherichia coli EC4100B] gi|323379085|gb|ADX51353.1| fagellar hook-basal body protein [Escherichia coli KO11] Length = 402 Score = 75.3 bits (183), Expect = 6e-12, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 71/195 (36%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ +LV+ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q+ K T + S + + N Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNAD 176 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 177 SYNKKGSVTVFDSQG 191 Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 21/173 (12%), Positives = 55/173 (31%), Gaps = 6/173 (3%) Query: 72 SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPI 131 F + GT +D A+ + + T F + + + + + Sbjct: 229 EFNANGTLVDGAMANNIATGAINGADPA-TFSLSFLNSMQQNTGANNIVATTQNGYKPGD 287 Query: 132 QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PL 186 + + +++ +++ + L + ++G ++ S Sbjct: 288 LVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTA 347 Query: 187 EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + T+ G LE SN + E+ MI + + S I ++ + + Sbjct: 348 GTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400 >gi|256020228|ref|ZP_05434093.1| flagellar basal body FlaE domain-containing protein [Shigella sp. D9] gi|332281390|ref|ZP_08393803.1| lateral flagellar hook protein [Shigella sp. D9] gi|332103742|gb|EGJ07088.1| lateral flagellar hook protein [Shigella sp. D9] Length = 400 Score = 75.3 bits (183), Expect = 6e-12, Method: Composition-based stats. Identities = 40/187 (21%), Positives = 69/187 (36%), Gaps = 6/187 (3%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66 I A+ ++L +++N++N TVG++++ +FS + Q + +G Sbjct: 5 IAATGLNAVNEQLDGISNNIANAGTVGYKSMTTQFSAMYA-----GSQAMGVSVAGTAQS 59 Query: 67 SKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125 GS +STG LD A+ D +F +S I TR G F+ +G +V+ASG Y Sbjct: 60 ISRGGSLVSTGNALDLAINDDGFFVTCDSAGNISYTRAGSFETDKNGYIVNASGAYLQGY 119 Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185 + + G I + T R + N Sbjct: 120 PVDDTGTLQTGTVTDIQIKTGNIPAQASSSLTFTANFDASDDAIDRTTVPFDATNSSSYT 179 Query: 186 LEDLSGV 192 + V Sbjct: 180 DSYTTTV 186 Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats. Identities = 25/194 (12%), Positives = 55/194 (28%), Gaps = 10/194 (5%) Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113 Q + + +TG F ++ I LT D Sbjct: 211 QYTFDGQQQTGVPATTLTFDPNTGKLTSPTTPQTIEFQTDAAAPIDLTVDYSTCTQYGSE 270 Query: 114 L-VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172 V+ + +Q+ +++ GE +G+V+ L + G Sbjct: 271 FSVTTNAANGYASATQNGVQVDDDGKVYATYSNGERMLQGQVV----LATFPNENGLEAV 326 Query: 173 ENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 + T+ G LE SN + E+ ++ + + + T +I Sbjct: 327 SGTAWVQTGESGTPLIGVPGSGTCGTLSSGVLESSNVDITSELVNLMTAQRNYQANTKVI 386 Query: 228 DENEKSMLEAIRNI 241 + + + + Sbjct: 387 ATSTQLDDALFQAM 400 >gi|153953785|ref|YP_001394550.1| hypothetical protein CKL_1160 [Clostridium kluyveri DSM 555] gi|219854401|ref|YP_002471523.1| hypothetical protein CKR_1058 [Clostridium kluyveri NBRC 12016] gi|146346666|gb|EDK33202.1| FlgE [Clostridium kluyveri DSM 555] gi|219568125|dbj|BAH06109.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 348 Score = 75.3 bits (183), Expect = 6e-12, Method: Composition-based stats. Identities = 32/204 (15%), Positives = 74/204 (36%), Gaps = 15/204 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M S G++ A +Q+L+ + +N++N+ T ++T + F +++ +D Sbjct: 1 MLPSMYSGISGLRANQQKLNVIGNNIANSSTTAYKTQSMNFQDMISQNLSDPSAPSTSIG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 Q V GS +T LDFA++G +F + + + + D + Sbjct: 61 GVNGKQSGLGVQVAGISTDFTTGSMGTTNRNLDFAIDGTGYFVVGTGKLGETSDDTGISI 120 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 +D +++ G ++ + + + I+Q G + + + + Sbjct: 121 DEDNNIL---GGGDNEVENTIEAHYSRDGSFYLDTQGNLINQNGYRVMGYLVTDENNTST 177 Query: 169 FVRRENSGISPNIPPTPLEDLSGV 192 +N D +G Sbjct: 178 ITYLQNDTEDTFQNAVQFVDANGT 201 Score = 72.6 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 16/97 (16%), Positives = 33/97 (34%), Gaps = 11/97 (11%) Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----------EDLSGVTVKRGFLEDS 202 V+ + + S G V+ + + + + +GFLE S Sbjct: 249 VLGQIAMVSFQNEGGLVKEGGNLYTTSSNSGQPIVMSGKGAENDNSAGYGKITQGFLEMS 308 Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 N + + MI T+ F + +I + + + I Sbjct: 309 NVDLAQQFTDMIVATRAFQANGKMITNGDTILEDLIN 345 >gi|116694219|ref|YP_728430.1| flagellar hook protein FlgE [Ralstonia eutropha H16] gi|113528718|emb|CAJ95065.1| flagellar hook protein [Ralstonia eutropha H16] Length = 408 Score = 75.3 bits (183), Expect = 6e-12, Method: Composition-based stats. Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 7/128 (5%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 F G++ A L + +N++N +TVG++ +F++V K V Sbjct: 2 GFGQGVSGLNAAASNLDVIGNNIANANTVGYKQSAAQFADVYAGTK-----IGLGVRVNS 56 Query: 64 EYLSKEVGSFISTGTELDFAL-EGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKY 121 S G+ ++G LD A+ G+ +F L SP + +R+G+F+ +DG + + G Sbjct: 57 VVQSFNQGNIEASGRSLDVAITNGNGFFRLTSPEGAVYYSRNGQFQRQEDGRITNMQGLQ 116 Query: 122 PVLDMASV 129 A V Sbjct: 117 VTGYPAGV 124 Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 18/212 (8%), Positives = 52/212 (24%), Gaps = 14/212 (6%) Query: 42 SEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101 +++ + +V G + A + + I L+ Sbjct: 196 QQLMAYFAKSAGAPTVAGGTDWRMYVTDVNGNAVGGAPVTLAFDNAGALQSPAAGAITLS 255 Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEI----------FNVGEKGEISQK 151 + + +G V +++ Sbjct: 256 QPAANGAQAMAMKLDLTGTTQFGADNDVKQLSQNGYTSGSLLGFSVNGDGTITGNYSNEQ 315 Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPL----EDLSGVTVKRGFLEDSNANSM 207 K + + + + +G ++ S S T++ +E SN + Sbjct: 316 TKPLGQIVMAAFGNVEGLKPEGDNVWSATGASGQALVGVAGGSMGTLRSNAVEASNVDLS 375 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 ++ +I + + + I + M + Sbjct: 376 GQLVNLIVAQRNYQANAQTIKAQDTVMQTLVN 407 >gi|238758110|ref|ZP_04619290.1| Flagellar hook protein FlgE [Yersinia aldovae ATCC 35236] gi|238703648|gb|EEP96185.1| Flagellar hook protein FlgE [Yersinia aldovae ATCC 35236] Length = 428 Score = 75.3 bits (183), Expect = 7e-12, Method: Composition-based stats. Identities = 23/214 (10%), Positives = 55/214 (25%), Gaps = 5/214 (2%) Query: 31 TVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF 90 TV + +V S + + + S TG+ Sbjct: 213 TVYTKDSSATLKDVTKPYDPTDPAAASARGTMVFDTNGALKSVTPTGSTTSTTDFNMTIP 272 Query: 91 ALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ 150 T D + + + S + + +Q Sbjct: 273 MGVVNGAPAQTFDLNVAGSKQQNTGTDSITAQNQTGYAAGEFTGFQVNKDGSVVGTYSNQ 332 Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNAN 205 + +++ + L + +G + ++ ++ G LE SN + Sbjct: 333 QTQLLGQIVLVNFSNPEGLASQGDNVWKETQSSGNPILGTAGGGGFGSLTSGALESSNVD 392 Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E+ MI + + S I ++ + + Sbjct: 393 LSKELVNMIVAQRNYQSNAQTIKTQDQILQTLVN 426 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 35/191 (18%), Positives = 66/191 (34%), Gaps = 8/191 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 F+ ++ A L + +N++N+ T GF+ V F+++ Q V Sbjct: 2 GFSQAVSGLNAASSNLDVIGNNIANSATSGFKAGSVSFADMFA-----GSQTGMGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASGKYP 122 G+ +T LD A+ + +F ++ G + R+G+FK+ ++ ++V+ G Sbjct: 57 ITQDFNDGTPTTTNRRLDLAISQNGFFRMQDSSGGVYFARNGQFKLDENRNIVNMQG--L 114 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 L P + N AT V + P P Sbjct: 115 SLTGYPATGTPPTVQQGANPVPLSIPQDMITAKATTSGNMVANLTSTHKVITDAFDPQKP 174 Query: 183 PTPLEDLSGVT 193 T + T Sbjct: 175 DTYSFVNNMTT 185 >gi|188527733|ref|YP_001910420.1| flagellar hook protein FlgE [Helicobacter pylori Shi470] gi|188143973|gb|ACD48390.1| flagellar hook protein FlgE [Helicobacter pylori Shi470] Length = 605 Score = 75.3 bits (183), Expect = 7e-12, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 56/146 (38%), Gaps = 22/146 (15%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56 M + + + + ++++N++N +T+G+R+ +F + + + ++ K Sbjct: 1 MNDTLLNAYSGIKTHQFGIDSLSNNIANVNTLGYRSNDPEFKTLFSSHLDALNAKSVVAN 60 Query: 57 ---SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---------------RGI 98 V LS + G ++ + E A +G WF + + Sbjct: 61 DRNYGVTGSGNVLSNKDGEYMPSEGEFHMAYQGKGWFVIGPNKNGEITINKNGFSKKQDN 120 Query: 99 ILTRDGRFKVTDDGSLVSASGKYPVL 124 LTR G F DG LV+ G Y Sbjct: 121 FLTRAGNFARDADGYLVTPEGYYVYG 146 Score = 65.7 bits (158), Expect = 5e-09, Method: Composition-based stats. Identities = 14/103 (13%), Positives = 34/103 (33%), Gaps = 16/103 (15%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS----------------GVTVKR 196 + +A +G+ + QG + + E+ ++ Sbjct: 500 EPVARIGILAFTNDQGLRKIGGNLYEMQEGTINGENRPLSGNPILGWDEEGKLKFGKIRH 559 Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +LE SN N+ + +I + + ++ + + EAI Sbjct: 560 KYLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAIS 602 >gi|167574701|ref|ZP_02367575.1| flagellar hook protein flgE [Burkholderia oklahomensis C6786] Length = 395 Score = 75.3 bits (183), Expect = 7e-12, Method: Composition-based stats. Identities = 39/197 (19%), Positives = 76/197 (38%), Gaps = 7/197 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SFNI L+ A+ +L+T++ N++NT T GF++ + F+ +V + + S + Sbjct: 2 SFNIALSGINAVNNQLNTISHNIANTGTYGFKSGRANFATMVAGAQPNGTYIGSITQNVG 61 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122 GS + TG LD A++ D +F + ++ TR G F+ DG +V G+ Sbjct: 62 IG-----GSIMKTGRGLDAAIQQDGFFVTKDADGSLLYTRVGIFQRAADGYMVDGFGRRV 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ + Q + + + ++ + + S Sbjct: 117 QGYAANGVLGDLQVPNTVEPAKASDSIEYAGNLSADWKVP-KNPKFDKDDDTSFNHSVST 175 Query: 183 PTPLEDLSGVTVKRGFL 199 V + F+ Sbjct: 176 TVYDSLGRKHVVTQYFV 192 Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 20/148 (13%), Positives = 49/148 (33%), Gaps = 10/148 (6%) Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG-----EISQKGKVIATM 158 G+ V + + V G + ++ EKG + + + + T+ Sbjct: 248 GKLVVNVNYTGVMQVGGDSTTTTNNQNGYAAGTPGEPSIDEKGNVVVQYSNGQKRTVGTV 307 Query: 159 GLYSVDMSQGFVRRENSGI-SPNIPPTP----LEDLSGVTVKRGFLEDSNANSMYEMGQM 213 L + + G ++ + P + LE SNA+ E+ M Sbjct: 308 ALAAFASADGLTAVGDTAWKASTASGNPLYGTPGSGMFSKLATASLEMSNADVTRELVDM 367 Query: 214 IHLTQKFNSITTLIDENEKSMLEAIRNI 241 + + + + + +I + M ++ + Sbjct: 368 MSAQRNYQANSKVIATENQMMQSLMQAL 395 >gi|91794995|ref|YP_564646.1| flagellar hook protein FlgE [Shewanella denitrificans OS217] gi|91716997|gb|ABE56923.1| flagellar basal body FlaE [Shewanella denitrificans OS217] Length = 402 Score = 75.3 bits (183), Expect = 7e-12, Method: Composition-based stats. Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 6/132 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SFNI L+ + Q L+T+++N++N+ TVGFR + +F+ + + Q Sbjct: 2 SFNIALSGLQSTTQDLNTISNNIANSSTVGFRGGRSEFAAIY-----NGGQAGGVSVMST 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASGKYP 122 + GS TG +LD ++GD +F L+ + + R G F G +V G Sbjct: 57 TQNFTKGGSLTYTGRQLDMGIQGDGFFVLKGTDGANMYARAGMFHQDSQGFVVDPVGNRL 116 Query: 123 VLDMASVPIQIP 134 AS +I Sbjct: 117 QGYGASATGRIQ 128 Score = 68.4 bits (165), Expect = 8e-10, Method: Composition-based stats. Identities = 22/184 (11%), Positives = 52/184 (28%), Gaps = 12/184 (6%) Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPV 123 ++ + + TG L+ A+ S + + Sbjct: 225 HKMTFDSNGVLQTGKTLNLAIADPTLLKGASAL------SFDIAYDKSTQYAANYNNSSL 278 Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVI-ATMGLYSVDMSQGFVRRENSGISPNIP 182 ++ N G + +++ + L + G N+ + Sbjct: 279 RQDGFTSGELKGVRLDDNGLVYGTYTNGQELLQGQVALANFSNPNGLKPVSNNAWIASNE 338 Query: 183 PTPLEDLSGVTVKRG-----FLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + T G +LE SN ++ EM ++ + + S ++D N Sbjct: 339 AGQAIMGAPSTGTMGTVTGGYLEGSNVDTTAEMVNLMSAQRNYQSNAKVLDVNSTMQQAL 398 Query: 238 IRNI 241 + +I Sbjct: 399 LNSI 402 >gi|301645413|ref|ZP_07245354.1| flagellar hook protein FlgE [Escherichia coli MS 146-1] gi|307136858|ref|ZP_07496214.1| flagellar basal body FlaE domain-containing protein [Escherichia coli H736] gi|331640713|ref|ZP_08341860.1| LfgE [Escherichia coli H736] gi|301076297|gb|EFK91103.1| flagellar hook protein FlgE [Escherichia coli MS 146-1] gi|315616827|gb|EFU97444.1| flgE [Escherichia coli 3431] gi|323181547|gb|EFZ66967.1| flgE [Escherichia coli 1357] gi|331040087|gb|EGI12295.1| LfgE [Escherichia coli H736] Length = 400 Score = 75.3 bits (183), Expect = 7e-12, Method: Composition-based stats. Identities = 40/187 (21%), Positives = 69/187 (36%), Gaps = 6/187 (3%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66 I A+ ++L +++N++N TVG++++ +FS + Q + +G Sbjct: 5 IAATGLNAVNEQLDGISNNIANAGTVGYKSMTTQFSAMYA-----GSQAMGVSVAGTAQS 59 Query: 67 SKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125 GS +STG LD A+ D +F +S I TR G F+ +G +V+ASG Y Sbjct: 60 ISRGGSLVSTGNALDLAINDDGFFVTCDSAGNISYTRAGSFETDKNGYIVNASGAYLQGY 119 Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185 + + G I + T R + N Sbjct: 120 PVDDTGTLQTGTVTDIQIKTGNIPAQASSSLTFTANFDASDDAIDRTTVPFDATNSSSYT 179 Query: 186 LEDLSGV 192 + V Sbjct: 180 DSYTTTV 186 Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats. Identities = 25/194 (12%), Positives = 55/194 (28%), Gaps = 10/194 (5%) Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113 Q + + +TG F ++ I LT D Sbjct: 211 QYTFDGQQQTGVPATTLTFDPNTGKLTSPTTPQTIEFQTDAAAPIDLTVDYSTCTQYGSD 270 Query: 114 L-VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172 V+ + +Q+ +++ GE +G+V+ L + G Sbjct: 271 FSVTTNAANGYASATQNGVQVDDDGKVYATYSNGERMLQGQVV----LATFPNENGLEAV 326 Query: 173 ENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 + T+ G LE SN + E+ ++ + + + T +I Sbjct: 327 SGTAWVQTGESGTPLIGVPGSGTCGTLSSGVLESSNVDITSELVNLMTAQRNYQANTKVI 386 Query: 228 DENEKSMLEAIRNI 241 + + + + Sbjct: 387 ATSTQLDDALFQAM 400 >gi|317180242|dbj|BAJ58028.1| flagellar hook protein FlgE [Helicobacter pylori F32] Length = 605 Score = 75.3 bits (183), Expect = 7e-12, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 56/146 (38%), Gaps = 22/146 (15%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56 M + + + + ++++N++N +T+G+R+ +F + + + ++ K Sbjct: 1 MNDTLLNAYSGIKTHQFGIDSLSNNIANVNTLGYRSNDPEFKTLFSSHLDALNAKSVVAN 60 Query: 57 ---SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---------------RGI 98 V LS + G ++ + E A +G WF + + Sbjct: 61 DRNYGVTGSGNVLSNKDGEYMPSEGEFHMAYQGKGWFVIGPNKNGEMTINKDGFSKKQDN 120 Query: 99 ILTRDGRFKVTDDGSLVSASGKYPVL 124 LTR G F DG LV+ G Y Sbjct: 121 FLTRAGNFARDADGYLVTPEGYYVYG 146 Score = 65.7 bits (158), Expect = 5e-09, Method: Composition-based stats. Identities = 14/103 (13%), Positives = 34/103 (33%), Gaps = 16/103 (15%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS----------------GVTVKR 196 + +A +G+ + QG + + E+ ++ Sbjct: 500 EPVARIGILAFTNDQGLRKIGGNLYEMQEGTINGENRPLSGNPILGWDEEGKLKFGKIRH 559 Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +LE SN N+ + +I + + ++ + + EAI Sbjct: 560 KYLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAIS 602 >gi|237731007|ref|ZP_04561488.1| flagellar hook protein FlgE [Citrobacter sp. 30_2] gi|226906546|gb|EEH92464.1| flagellar hook protein FlgE [Citrobacter sp. 30_2] Length = 417 Score = 75.3 bits (183), Expect = 7e-12, Method: Composition-based stats. Identities = 32/195 (16%), Positives = 71/195 (36%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F + +S + +R+G+FK+ ++ ++V+ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRMVDSNGSVFYSRNGQFKLDENRNIVNMQGLQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q+ K T + S V + + Sbjct: 117 TGYPATGTPPTVQQGANPAPITIPNTLMAAKSTTTASMQVNLNSTDKVPTKTPFNPSDAD 176 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 177 SYNKKGSVTVFDSQG 191 Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 13/122 (10%), Positives = 40/122 (32%), Gaps = 5/122 (4%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + + + +++ +V+ + L + ++G + ++ + Sbjct: 294 NQNGYKPGDLVSYQINNDGTVVGNYSNEQQQVLGQIVLANFANNEGLASQGDNVWAATQS 353 Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + + + G LE SN + E+ MI + + S I ++ + Sbjct: 354 SGVALLGTAGEGNFGKLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 413 Query: 238 IR 239 + Sbjct: 414 VN 415 >gi|208434813|ref|YP_002266479.1| flagellar hook protein [Helicobacter pylori G27] gi|208432742|gb|ACI27613.1| flagellar hook protein [Helicobacter pylori G27] Length = 605 Score = 75.3 bits (183), Expect = 7e-12, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 56/146 (38%), Gaps = 22/146 (15%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56 M + + + + ++++N++N +T+G+R+ +F + + + ++ K Sbjct: 1 MNDTLLNAYSGIKTHQFGIDSLSNNIANVNTLGYRSNDPEFKTLFSSHLDALNAKSVVTN 60 Query: 57 ---SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---------------RGI 98 V LS + G ++ + E A +G WF + + Sbjct: 61 DRNYGVTGSGNVLSNKDGEYMPSEGEFHMAYQGKGWFVIGPNKNGEMTINKDGFSKKQDN 120 Query: 99 ILTRDGRFKVTDDGSLVSASGKYPVL 124 LTR G F DG LV+ G Y Sbjct: 121 FLTRAGNFARDADGYLVTPEGYYVYG 146 Score = 65.7 bits (158), Expect = 5e-09, Method: Composition-based stats. Identities = 14/103 (13%), Positives = 34/103 (33%), Gaps = 16/103 (15%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS----------------GVTVKR 196 + +A +G+ + QG + + E+ ++ Sbjct: 500 EPVARIGILAFTNDQGLRKIGGNLYEMQEGTINGENRPLSGNPILGWDEEGKLKFGKIRH 559 Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +LE SN N+ + +I + + ++ + + EAI Sbjct: 560 KYLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAIS 602 >gi|193069470|ref|ZP_03050424.1| flagellar hook protein FlgE [Escherichia coli E110019] gi|192957218|gb|EDV87667.1| flagellar hook protein FlgE [Escherichia coli E110019] gi|323174795|gb|EFZ60410.1| flagellar hook protein flgE [Escherichia coli LT-68] Length = 401 Score = 75.3 bits (183), Expect = 7e-12, Method: Composition-based stats. Identities = 34/195 (17%), Positives = 71/195 (36%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF+T F+++ + V Sbjct: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKTGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ +LV+ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q+ K T + S + + N Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNAD 176 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 177 SYNKKGSVTVFDSQG 191 Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + + + +++ +++ + L + ++G ++ S Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 337 Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + T+ G LE SN + E+ MI + + S I ++ + Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397 Query: 238 IR 239 + Sbjct: 398 VN 399 >gi|307637597|gb|ADN80047.1| Flagellar hook protein [Helicobacter pylori 908] gi|325996190|gb|ADZ51595.1| Flagellar hook protein [Helicobacter pylori 2018] gi|325997786|gb|ADZ49994.1| Flagellar hook protein [Helicobacter pylori 2017] Length = 605 Score = 75.3 bits (183), Expect = 7e-12, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 56/146 (38%), Gaps = 22/146 (15%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56 M + + + + ++++N++N +T+G+R+ +F + + + ++ K Sbjct: 1 MNDTLLNAYSGIKTHQFGIDSLSNNIANVNTLGYRSNDPEFKTLFSSHLDALNAKSVVAN 60 Query: 57 ---SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---------------RGI 98 V LS + G ++ + E A +G WF + + Sbjct: 61 DRNYGVTGSGNVLSNKDGEYMPSEGEFHMAYQGKGWFVIGPNKNGEMTINKDGFSKKQDN 120 Query: 99 ILTRDGRFKVTDDGSLVSASGKYPVL 124 LTR G F DG LV+ G Y Sbjct: 121 FLTRAGNFARDADGYLVTPEGYYVYG 146 Score = 65.7 bits (158), Expect = 5e-09, Method: Composition-based stats. Identities = 14/103 (13%), Positives = 34/103 (33%), Gaps = 16/103 (15%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS----------------GVTVKR 196 + +A +G+ + QG + + E+ ++ Sbjct: 500 EPVARIGILAFTNDQGLRKIGGNLYEMQEGTINGENRPLSGNPILGWDEEGKLKFGKIRH 559 Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +LE SN N+ + +I + + ++ + + EAI Sbjct: 560 KYLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAIS 602 >gi|260853466|ref|YP_003227357.1| putative lateral flagellar hook protein [Escherichia coli O26:H11 str. 11368] gi|260866413|ref|YP_003232815.1| putative lateral flagellar hook protein [Escherichia coli O111:H- str. 11128] gi|257752115|dbj|BAI23617.1| predicted lateral flagellar hook protein [Escherichia coli O26:H11 str. 11368] gi|257762769|dbj|BAI34264.1| predicted lateral flagellar hook protein [Escherichia coli O111:H- str. 11128] gi|323158103|gb|EFZ44202.1| hypothetical protein ECEPECA14_0101 [Escherichia coli EPECa14] gi|323178494|gb|EFZ64072.1| hypothetical protein ECOK1180_3007 [Escherichia coli 1180] Length = 400 Score = 75.3 bits (183), Expect = 7e-12, Method: Composition-based stats. Identities = 40/187 (21%), Positives = 71/187 (37%), Gaps = 6/187 (3%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66 I A+ ++L +++N++N TVG++++ +FS + Q + +G Sbjct: 5 IAATGLNAVNEQLDGISNNIANAGTVGYKSMTTQFSAMYA-----GSQAMGVSVAGTAQS 59 Query: 67 SKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125 GS +STG LD A+ D +F + +S I TR G F+ +G +V+ASG Y Sbjct: 60 ISRGGSLVSTGNALDLAINDDGFFVMCDSAGNISYTRAGSFETDKNGYIVNASGAYLQGY 119 Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185 + + G I + T + R + N Sbjct: 120 PVDDTGTLQTGTVTDIQIKTGNIPAQASSSLTFTANFNASDEAIDRTTVPFDATNSSSYT 179 Query: 186 LEDLSGV 192 + V Sbjct: 180 DSYTTTV 186 Score = 67.6 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 24/194 (12%), Positives = 55/194 (28%), Gaps = 10/194 (5%) Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113 Q + + +TG F ++ + LT D Sbjct: 211 QYTFDGQQQTGVPATTLTFDPNTGKLTSPTTPQTIEFQTDAAAPVDLTVDYSTCTQYGSE 270 Query: 114 L-VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172 V+ + +Q+ +++ GE +G+V+ L + G Sbjct: 271 FSVTTNAANGYASATQNGVQVDDDGKVYATYSNGERMLQGQVV----LATFPNENGLEAV 326 Query: 173 ENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 + T+ G LE SN + E+ ++ + + + T +I Sbjct: 327 SGTAWVQTGESGTPLIGVPGSGTCGTLSSGVLESSNVDITSELVNLMTAQRNYQANTKVI 386 Query: 228 DENEKSMLEAIRNI 241 + + + + Sbjct: 387 ATSTQLDDALFQAM 400 >gi|238752866|ref|ZP_04614331.1| Lateral flagellar hook protein (FlgE-like) [Yersinia rohdei ATCC 43380] gi|238708905|gb|EEQ01158.1| Lateral flagellar hook protein (FlgE-like) [Yersinia rohdei ATCC 43380] Length = 411 Score = 75.3 bits (183), Expect = 7e-12, Method: Composition-based stats. Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 6/132 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SF+I A+ ++LST+++N++N+ T GF+ + +F+ + Q + SG Sbjct: 2 SFSIANTGLSAVTEQLSTISNNIANSATKGFKASRTEFASMYAQ-----SQPLGVAVSGV 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASGKYP 122 + GS TG +D A+ G+ +F +++ TR G F G LV+ SG Sbjct: 57 SQSINKDGSIDRTGNAMDLAIAGNGFFVVKNSNGDEAYTRAGMFTSDKSGMLVNGSGMKL 116 Query: 123 VLDMASVPIQIP 134 I Sbjct: 117 QGYPVDAAGNIQ 128 Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 22/166 (13%), Positives = 53/166 (31%), Gaps = 10/166 (6%) Query: 81 DFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIF 140 + A+ G +P I + G + + + + I ++ Sbjct: 251 NMAISGGYGSPGAAPYSIDVDYAGTTQFDSNFLPTTNKSDGYTSGSKNGER-IENDGSVY 309 Query: 141 NVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VK 195 GE +G+++ L + G + + S + ++ Sbjct: 310 ATFSNGERMLQGRLV----LANFANPNGLAAQNGTTWSATSKSGAALLGEAGSGMLGSIE 365 Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 G LE SN + E+ ++ + + + T +I N+ M + + Sbjct: 366 AGALEASNVDLTAELVGLMTAQRNYQANTKIISTNDSMMNALFQVL 411 >gi|331662482|ref|ZP_08363405.1| flagellar hook protein FlgE [Escherichia coli TA143] gi|284920899|emb|CBG33962.1| flagellar hook protein FlgE [Escherichia coli 042] gi|331060904|gb|EGI32868.1| flagellar hook protein FlgE [Escherichia coli TA143] Length = 402 Score = 75.3 bits (183), Expect = 7e-12, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 71/195 (36%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ +LV+ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q+ K T + S + + N Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKATTTASMQINLNSSDPLPTVTPFSASNAD 176 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 177 SYNKKGSVTVFDSQG 191 Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 21/173 (12%), Positives = 55/173 (31%), Gaps = 6/173 (3%) Query: 72 SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPI 131 F + GT +D A+ + + T F + + + + + Sbjct: 229 EFNANGTLVDGAMANNIATGAINGADPA-TFSLSFLNSMQQNTGANNIVATTQNGYKPGD 287 Query: 132 QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PL 186 + + +++ +++ + L + ++G ++ S Sbjct: 288 LVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTA 347 Query: 187 EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + T+ G LE SN + E+ MI + + S I ++ + + Sbjct: 348 GTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400 >gi|323165588|gb|EFZ51375.1| flagellar basal-body rod protein flgG [Shigella sonnei 53G] Length = 125 Score = 75.3 bits (183), Expect = 7e-12, Method: Composition-based stats. Identities = 10/96 (10%), Positives = 32/96 (33%), Gaps = 5/96 (5%) Query: 149 SQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSN 203 + + L + G + + + + + +G++E SN Sbjct: 29 QAAPVQVGQLNLTTFMNDTGLESIGENLYTETQSSGVPNESTPGLNGAGLLYQGYVETSN 88 Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 N E+ MI + + + + + ++ + + + Sbjct: 89 VNVAEELVNMIQVQRAYEINSKAVSTTDQMLQKLTQ 124 >gi|320173529|gb|EFW48725.1| Flagellar hook protein FlgE [Shigella dysenteriae CDC 74-1112] Length = 402 Score = 75.3 bits (183), Expect = 7e-12, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 71/195 (36%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ +LV+ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q+ K T + S + + N Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNAD 176 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 177 SYNKKGSVTVFDSQG 191 Score = 71.8 bits (174), Expect = 7e-11, Method: Composition-based stats. Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + + + +++ +++ + L + ++G ++ S Sbjct: 279 PQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 338 Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + T+ G LE SN + E+ MI + + S I ++ + Sbjct: 339 SGVALLGTAGTGNFATLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 398 Query: 238 IR 239 + Sbjct: 399 VN 400 >gi|109947808|ref|YP_665036.1| flagellar hook protein FlgE [Helicobacter acinonychis str. Sheeba] gi|109715029|emb|CAK00037.1| flagellar hook protein [Helicobacter acinonychis str. Sheeba] Length = 605 Score = 75.3 bits (183), Expect = 7e-12, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 56/146 (38%), Gaps = 22/146 (15%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56 M + + + + ++++N++N +T+G+R+ +F + + + ++ K Sbjct: 1 MNDTLLNAYSGIKTHQFGIDSLSNNIANVNTLGYRSNDPEFKTLFSSHLDALNAKSVVAN 60 Query: 57 ---SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---------------RGI 98 V LS + G ++ + E A +G WF + + Sbjct: 61 DRNYGVTGSGNVLSNKDGEYMPSEGEFHMAYQGKGWFVIGPNKNGEMTINKDGFSKKQDN 120 Query: 99 ILTRDGRFKVTDDGSLVSASGKYPVL 124 LTR G F DG LV+ G Y Sbjct: 121 FLTRAGNFARDADGYLVTPEGYYVYG 146 Score = 66.8 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 14/103 (13%), Positives = 34/103 (33%), Gaps = 16/103 (15%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS----------------GVTVKR 196 + +A +G+ + QG + + E+ ++ Sbjct: 500 EPVARIGILAFTNDQGLRKIGGNLYEMQEGTINGENRPLSGNPILGWDEEGKLKFGKIRH 559 Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +LE SN N+ + +I + + ++ + + EAI Sbjct: 560 KYLETSNVNAGNALTNLILMQRGYSMNAKAFGAGDDMIKEAIS 602 >gi|327398495|ref|YP_004339364.1| flagellar hook-basal body protein [Hippea maritima DSM 10411] gi|327181124|gb|AEA33305.1| flagellar hook-basal body protein [Hippea maritima DSM 10411] Length = 719 Score = 75.3 bits (183), Expect = 7e-12, Method: Composition-based stats. Identities = 18/123 (14%), Positives = 35/123 (28%), Gaps = 5/123 (4%) Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 D V + K +A + + ++G ++ S S Sbjct: 594 QTQDGYPGGSLQRIMINQDGVVVGIFSNGKSYPLAQIAMAKFANNEGLMKEGGSMYSETA 653 Query: 182 PPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 T LE SN + E MI + F + + I +++ + E Sbjct: 654 NSGAPLIGTAGTGGRGTFAPSHLEMSNVDLAEEFTNMIIYERAFQANSRSITTSDQMIQE 713 Query: 237 AIR 239 + Sbjct: 714 LLN 716 Score = 65.3 bits (157), Expect = 7e-09, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 65/182 (35%), Gaps = 14/182 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN---------- 50 M S G++ + +Q + V +N++N +T+GF+ ++ F +V+ + Sbjct: 1 MLRSLWSGVSGLKSEQQGMDVVGNNVANVNTIGFKKGRINFVDVLSQTMSAATGPEGNIG 60 Query: 51 --DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF--ALESPRGIILTRDGRF 106 + Q GS +T D A++GD +F + + + TR G F Sbjct: 61 GKNAAQIGLGTTVAVVDNIFSQGSLQATSKITDLAIQGDGFFVVSDDGGKTYRYTRAGDF 120 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 DG+LV+ G +A+ + I +++ Sbjct: 121 SFDADGNLVNPEGFIVQGWLANEETHKINTAASIENIVVPQDKTVPAGITKNISIKANLN 180 Query: 167 QG 168 G Sbjct: 181 GG 182 >gi|317014317|gb|ADU81753.1| flagellar hook protein FlgE [Helicobacter pylori Gambia94/24] Length = 605 Score = 75.3 bits (183), Expect = 7e-12, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 56/146 (38%), Gaps = 22/146 (15%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56 M + + + + ++++N++N +T+G+R+ +F + + + ++ K Sbjct: 1 MNDTLLNAYSGIKTHQFGIDSLSNNIANVNTLGYRSNDPEFKTLFSSHLDALNAKSVVAN 60 Query: 57 ---SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---------------RGI 98 V LS + G ++ + E A +G WF + + Sbjct: 61 DRNYGVTGSGNVLSNKDGEYMPSEGEFHMAYQGKGWFVIGPNKNGEMTINKDGFSKKQDN 120 Query: 99 ILTRDGRFKVTDDGSLVSASGKYPVL 124 LTR G F DG LV+ G Y Sbjct: 121 FLTRAGNFARDADGYLVTPEGYYVYG 146 Score = 65.7 bits (158), Expect = 5e-09, Method: Composition-based stats. Identities = 14/103 (13%), Positives = 34/103 (33%), Gaps = 16/103 (15%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS----------------GVTVKR 196 + +A +G+ + QG + + E+ ++ Sbjct: 500 EPVARIGILAFTNDQGLRKIGGNLYEMQEGTINGENRPLSGNPILGWDEEGKLKFGKIRH 559 Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +LE SN N+ + +I + + ++ + + EAI Sbjct: 560 KYLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAIS 602 >gi|291617020|ref|YP_003519762.1| FlgE [Pantoea ananatis LMG 20103] gi|291152050|gb|ADD76634.1| FlgE [Pantoea ananatis LMG 20103] Length = 415 Score = 75.3 bits (183), Expect = 7e-12, Method: Composition-based stats. Identities = 13/125 (10%), Positives = 38/125 (30%), Gaps = 5/125 (4%) Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 + + +Q+ +++ + L S +G + ++ + Sbjct: 289 GNATQNGYAPGDLTSYAINNDGTITGSYSNQRTQLLGQIVLASFSNPEGLKSQGDNVWAE 348 Query: 180 NIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 + ++ G LE SN + E+ MI + + + I ++ + Sbjct: 349 TNASGQAAVGLANTGTFGSLTAGALESSNVDMSKELVNMIVAQRNYQANAQTIKTQDQIL 408 Query: 235 LEAIR 239 + Sbjct: 409 NTLVN 413 Score = 71.8 bits (174), Expect = 8e-11, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 64/164 (39%), Gaps = 6/164 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SF+ ++ A L + +N++N+ T GF++ + F+++ + K++ V Sbjct: 2 SFSQAVSGLGAASSNLDVIGNNIANSATAGFKSSTIAFADMFAGSNVGLGTKVAAV---- 57 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 + GS +T LD AL G+ +F S + +R+G+F + + +LV+ G Sbjct: 58 -IQNFNDGSTTTTSRGLDVALSGNGFFRLTNSAGAVSYSRNGQFTLDQNRNLVNTQGLNV 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 AS Q + T + S Sbjct: 117 TGYPASGVPPTIQSGANPVAIKIPTTQMPANATTTANQVAKLNS 160 >gi|90577344|ref|ZP_01233155.1| flagellar hook protein [Vibrio angustum S14] gi|90440430|gb|EAS65610.1| flagellar hook protein [Vibrio angustum S14] Length = 408 Score = 75.3 bits (183), Expect = 7e-12, Method: Composition-based stats. Identities = 33/132 (25%), Positives = 56/132 (42%), Gaps = 6/132 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SF+I L+ A +L+T+++N++N T GF+ + +FS V + Q + Sbjct: 2 SFDIALSGLDATNVQLNTISNNIANVSTSGFKESRTEFSAVY-----NGMQAGGVEVAAI 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 + GS TG LD A+ G +F + + TR G F D ++VS +G Sbjct: 57 SQNFDKTGSITGTGRPLDLAISGSGFFVTKDHTGQTLYTRSGVFNSDKDNNIVSNNGAKL 116 Query: 123 VLDMASVPIQIP 134 + Sbjct: 117 QGYTVDANNNLQ 128 Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 13/100 (13%), Positives = 34/100 (34%), Gaps = 5/100 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLED 201 + + ++ + L QG V+ + + + + T + G LE Sbjct: 309 YTNGQSQLQGQVMLADFANPQGLVKTNGTSWIQSFSSGAPVNGAPSTGTLGGLVAGALEG 368 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 SN + E+ ++ + + + I ++K + Sbjct: 369 SNVDLTSELVSLMTAQRNYQANAKTISTSDKLTQSLFNAV 408 >gi|15611911|ref|NP_223562.1| flagellar hook protein FlgE [Helicobacter pylori J99] gi|4155414|gb|AAD06422.1| putative FLAGELLAR BASAL-BODY/ROD/HOOKPROTEIN [Helicobacter pylori J99] Length = 605 Score = 75.3 bits (183), Expect = 7e-12, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 56/146 (38%), Gaps = 22/146 (15%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI---- 56 M + + + + ++++N++N +T+G+R+ +F + + + ++ K Sbjct: 1 MNDTLLNAYSGIKTHQFGIDSLSNNIANVNTLGYRSNDPEFKTLFSSHLDALNAKSVVAN 60 Query: 57 ---SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP---------------RGI 98 V LS + G ++ + E A +G WF + + Sbjct: 61 DRNYGVTGSGNVLSNKDGEYMPSEGEFHMAYQGKGWFVIGPNKNGEMTINKDGFSKKQDN 120 Query: 99 ILTRDGRFKVTDDGSLVSASGKYPVL 124 LTR G F DG LV+ G Y Sbjct: 121 FLTRAGNFARDADGYLVTPEGYYVYG 146 Score = 65.7 bits (158), Expect = 5e-09, Method: Composition-based stats. Identities = 14/103 (13%), Positives = 34/103 (33%), Gaps = 16/103 (15%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS----------------GVTVKR 196 + +A +G+ + QG + + E+ ++ Sbjct: 500 EPVARIGILAFTNDQGLRKIGGNLYEMQEGTINGENRPLSGNPILGWDEEGKLKFGKIRH 559 Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +LE SN N+ + +I + + ++ + + EAI Sbjct: 560 KYLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAIS 602 >gi|327393471|dbj|BAK10893.1| flagellar hook protein FlgE [Pantoea ananatis AJ13355] Length = 415 Score = 75.3 bits (183), Expect = 7e-12, Method: Composition-based stats. Identities = 13/125 (10%), Positives = 38/125 (30%), Gaps = 5/125 (4%) Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 + + +Q+ +++ + L S +G + ++ + Sbjct: 289 GNATQNGYAPGDLTSYAINNDGTITGSYSNQRTQLLGQIVLASFSNPEGLKSQGDNVWAE 348 Query: 180 NIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 + ++ G LE SN + E+ MI + + + I ++ + Sbjct: 349 TNASGQAAVGLANTGTFGSLTAGALESSNVDMSKELVNMIVAQRNYQANAQTIKTQDQIL 408 Query: 235 LEAIR 239 + Sbjct: 409 NTLVN 413 Score = 71.8 bits (174), Expect = 8e-11, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 64/164 (39%), Gaps = 6/164 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SF+ ++ A L + +N++N+ T GF++ + F+++ + K++ V Sbjct: 2 SFSQAVSGLGAASSNLDVIGNNIANSATAGFKSSTIAFADMFAGSNVGLGTKVAAV---- 57 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 + GS +T LD AL G+ +F S + +R+G+F + + +LV+ G Sbjct: 58 -IQNFNDGSTTTTSRGLDVALSGNGFFRLTNSAGAVSYSRNGQFTLDQNRNLVNTQGLNV 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 AS Q + T + S Sbjct: 117 TGYPASGVPPTIQTGANPVAIKIPTTQMPANATTTANQVAKLNS 160 >gi|300817270|ref|ZP_07097488.1| flagellar hook protein FlgE [Escherichia coli MS 107-1] gi|307313519|ref|ZP_07593140.1| fagellar hook-basal body protein [Escherichia coli W] gi|300530246|gb|EFK51308.1| flagellar hook protein FlgE [Escherichia coli MS 107-1] gi|306906687|gb|EFN37198.1| fagellar hook-basal body protein [Escherichia coli W] gi|315059542|gb|ADT73869.1| flagellar hook protein [Escherichia coli W] gi|323171064|gb|EFZ56713.1| flgE [Escherichia coli LT-68] gi|323379899|gb|ADX52167.1| fagellar hook-basal body protein [Escherichia coli KO11] Length = 400 Score = 75.3 bits (183), Expect = 7e-12, Method: Composition-based stats. Identities = 40/187 (21%), Positives = 69/187 (36%), Gaps = 6/187 (3%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66 I A+ ++L +++N++N TVG++++ +FS + Q + +G Sbjct: 5 IAATGLNAVNEQLDGISNNIANAGTVGYKSMTTQFSAMYA-----GSQAMGVSVAGTAQS 59 Query: 67 SKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125 GS +STG LD A+ D +F +S I TR G F+ +G +V+ASG Y Sbjct: 60 ISRGGSLVSTGNALDLAINNDGFFVTCDSAGNISYTRAGSFETDKNGYIVNASGAYLQGY 119 Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185 + + G I + T R + N Sbjct: 120 PVDDTGTLQTGTVTDIQIKTGNIPAQASSSLTFTANFDASDDAIDRTTVPFDATNSSSYT 179 Query: 186 LEDLSGV 192 + V Sbjct: 180 DSYTTTV 186 Score = 68.4 bits (165), Expect = 9e-10, Method: Composition-based stats. Identities = 25/194 (12%), Positives = 55/194 (28%), Gaps = 10/194 (5%) Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113 Q + + +TG F ++ I LT D Sbjct: 211 QYTFDGQQQTGVPATTLTFDPNTGKLTSPTTPQTIEFQTDAAAPIDLTVDYSTCTQYGSE 270 Query: 114 L-VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172 V+ + +Q+ +++ GE +G+V+ L + G Sbjct: 271 FSVTTNAANGYASATQNGVQVDDDGKVYATYSNGERMLQGQVV----LATFPNENGLEAV 326 Query: 173 ENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 + T+ G LE SN + E+ ++ + + + T +I Sbjct: 327 SGTAWVQTGESGTPLIGVPGSGTCGTLSSGVLESSNVDITSELVNLMTAQRNYQANTKVI 386 Query: 228 DENEKSMLEAIRNI 241 + + + + Sbjct: 387 ATSTQLDDALFQAM 400 >gi|83595982|gb|ABC25342.1| flagellar hook protein [uncultured marine bacterium Ant24C4] Length = 437 Score = 75.3 bits (183), Expect = 7e-12, Method: Composition-based stats. Identities = 41/165 (24%), Positives = 64/165 (38%), Gaps = 10/165 (6%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 +S N G+A A RL+T++DN++N+ T G++ F +V N V + Sbjct: 5 SSLNAGVAGLSANATRLATISDNIANSSTFGYKRAVTDFQSLVIENSNSKYTAG-GVRTT 63 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESP---------RGIILTRDGRFKVTDDGS 113 L E GS +ST D A+ G + S ++LT G F+ +DG Sbjct: 64 TTRLIDERGSLVSTTNPTDLAVRGRGLLPVTSEASVQVANGDHPLLLTTTGSFRPDEDGY 123 Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158 L S SG + A+ IP G + + Sbjct: 124 LRSPSGLVLMGWAANADGTIPTNPRDSVDGLEPIKINSNQFAGEP 168 Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 15/98 (15%), Positives = 32/98 (32%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLED 201 S +V+ + L V G + + D V E+ Sbjct: 337 FDSGINRVLYQVPLVDVSNVNGLESLDQQSYRVSPDSGTFFLWDAGDGPTGDVVSFAREE 396 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S+ + E+ Q+I + ++S +I ++ + E Sbjct: 397 SSTDVAGELTQLIQTQRAYSSNAKVIQTVDEMLQETTN 434 >gi|149375034|ref|ZP_01892807.1| Flagellar hook protein FlgE [Marinobacter algicola DG893] gi|149360923|gb|EDM49374.1| Flagellar hook protein FlgE [Marinobacter algicola DG893] Length = 618 Score = 75.3 bits (183), Expect = 7e-12, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 46/110 (41%), Gaps = 2/110 (1%) Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGA--IKNDIDQKISFVASGKEYLSKEVGSFI 74 L +N++N TVGF++ + +F ++ + + + V + G+ Sbjct: 1 MDLDVTGNNIANASTVGFKSSQAQFGDLYASGFLSAGTNPIGDGVRVQDVKQNFGQGNIS 60 Query: 75 STGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVL 124 T LD A+ GD +F L + + +R G+F + DG + + Sbjct: 61 FTDNGLDLAINGDGFFVLNNGGEVRYSRAGQFGIDKDGFVTNNQNMRVQG 110 Score = 69.5 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 11/98 (11%), Positives = 34/98 (34%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLED 201 + + + + + L S + + G + + + ++K +E+ Sbjct: 519 YTNGQSQSLGQVALASFNNTNGLSPVGETTWVETFESGQPIIGAPDTGTLGSIKASSIEE 578 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ +I + + + I+ ++ I Sbjct: 579 SNVDLSAELVNLIIAQRNYQANAKTIETSDAVTQTVIN 616 >gi|327254554|gb|EGE66170.1| hypothetical protein ECSTEC7V_0308 [Escherichia coli STEC_7v] Length = 400 Score = 75.3 bits (183), Expect = 8e-12, Method: Composition-based stats. Identities = 41/187 (21%), Positives = 73/187 (39%), Gaps = 13/187 (6%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66 I A+ ++L +++N++N TVG++++ +FS + Q + +G Sbjct: 5 IAATGLNAVNEQLDGISNNIANAGTVGYKSMTTQFSAMYA-----GSQAMGVSVAGTAQS 59 Query: 67 SKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125 GS +STG LD A+ D +F + +S I TR G F+ DG +V+ASG Y Sbjct: 60 ISRGGSLVSTGNALDLAINDDGFFVMCDSAGNISYTRAGSFETDKDGYIVNASGAYLQGY 119 Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185 + + G I S+ + +++ +P P Sbjct: 120 PVDDSGTLQTGTVTDIQIKTGN-------IPAQASSSLTFTANLDASDDAIDRTTVPFDP 172 Query: 186 LEDLSGV 192 S Sbjct: 173 TNSSSYT 179 Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 25/194 (12%), Positives = 55/194 (28%), Gaps = 10/194 (5%) Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113 Q + + +TG F ++ I LT D Sbjct: 211 QYTFDGQQQTGVPATTLTFDPNTGKLTSPTTPQTIEFQTDAAAPIDLTVDYSTCTQYGSD 270 Query: 114 L-VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172 V+ + +Q+ +++ GE +G+V+ L + G Sbjct: 271 FSVTTNAADGYASATQNGVQVDDDGKVYATYSNGERMLQGQVV----LATFPNDDGLQAV 326 Query: 173 ENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 + T+ G LE SN + E+ ++ + + + T +I Sbjct: 327 SGTAWVQTGESGTPLIGVPGSGTCGTLTSGALESSNVDITSELVNLMTAQRNYQANTKVI 386 Query: 228 DENEKSMLEAIRNI 241 + + + + Sbjct: 387 ATSTQLDDALFQAM 400 >gi|295096225|emb|CBK85315.1| fagellar hook-basal body proteins [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 402 Score = 75.3 bits (183), Expect = 8e-12, Method: Composition-based stats. Identities = 31/192 (16%), Positives = 70/192 (36%), Gaps = 11/192 (5%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGSASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F + ++ + +R+G+FK+ ++ +LV+ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRMVDANGSVFYSRNGQFKLDENRNLVNMQGLQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + + IS ++A + + + P Sbjct: 117 TGYPVAGTPP-----TVQTGANPQAISIPTTLMAAKSTTTASQQINLNSTDTAPTVAFDP 171 Query: 183 PTPLEDLSGVTV 194 P TV Sbjct: 172 SNPDSYNKKGTV 183 Score = 74.9 bits (182), Expect = 9e-12, Method: Composition-based stats. Identities = 19/150 (12%), Positives = 47/150 (31%), Gaps = 5/150 (3%) Query: 95 PRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV 154 P T D F + + + + + + + +++ +V Sbjct: 251 PGATPATFDMSFANSMQQNTGANNIVATSQNGYKPGDLVSYQINDDGTVVGNYSNEQTQV 310 Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLEDSNANSMYE 209 + + L + ++G ++ S + T+ G LE SN + E Sbjct: 311 LGQIVLANFANNEGLKSEGDNVWSATQSSGVALLGTAGSGNFGTLTNGALEASNVDLSKE 370 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + MI + + S I ++ + + Sbjct: 371 LVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400 >gi|146305250|ref|YP_001185715.1| flagellar basal body FlaE domain-containing protein [Pseudomonas mendocina ymp] gi|145573451|gb|ABP82983.1| flagellar basal body FlaE domain protein [Pseudomonas mendocina ymp] Length = 395 Score = 75.3 bits (183), Expect = 8e-12, Method: Composition-based stats. Identities = 32/131 (24%), Positives = 57/131 (43%), Gaps = 6/131 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SFNI + A+ ++L+T++ N++N T GF++ + +F + Q + Sbjct: 2 SFNIAMTGLSAVNEQLNTISHNIANAGTTGFKSSRTEFGSIYADS-----QAMGVEVLAT 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASGKYP 122 + GS ++TG LD A+ G +F S + TR G F D +V+A+G Sbjct: 57 TQSISQGGSLVTTGRSLDLAISGGGFFVTRGSNGDVSYTRAGVFGADKDNYIVNAAGLKL 116 Query: 123 VLDMASVPIQI 133 + Sbjct: 117 QGYPVDAAGNL 127 Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 14/149 (9%), Positives = 47/149 (31%), Gaps = 12/149 (8%) Query: 92 LESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQK 151 I + ++ +V+++ + + + ++ G+ + Sbjct: 248 DPMNIAIDYSNSSQYGSD---FVVTSNRASGYAAGEQTGLSVEKDGMVYANYSNGQRMLQ 304 Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANS 206 G+V L + + G + + + G LE+SN + Sbjct: 305 GQV----ALATFANAGGLKNVSGTAWVESAESGAALIGVPGVGPFGELVAGSLENSNVDL 360 Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSML 235 ++ ++ + + + T ++ N++ Sbjct: 361 TQQLVGLMEGQRNYQANTKVLTTNKELTQ 389 >gi|297517866|ref|ZP_06936252.1| flagellar hook protein FlgE [Escherichia coli OP50] Length = 401 Score = 75.3 bits (183), Expect = 8e-12, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 71/195 (36%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ +LV+ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q+ K T + S + + N Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMATKTTTTASMQINLNSSDPLPTVTPFSASNAD 176 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 177 SYNKKGSVTVFDSQG 191 Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + + + +++ +++ + L + ++G ++ S Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 337 Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + T+ G LE SN + E+ MI + + S I ++ + Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397 Query: 238 IR 239 + Sbjct: 398 VN 399 >gi|192289142|ref|YP_001989747.1| flagellar hook protein FlgE [Rhodopseudomonas palustris TIE-1] gi|192282891|gb|ACE99271.1| flagellar basal body FlaE domain protein [Rhodopseudomonas palustris TIE-1] Length = 421 Score = 74.9 bits (182), Expect = 8e-12, Method: Composition-based stats. Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 3/117 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + + ++A A Q LS ++DN++N+DT G++T FS++V A + V Sbjct: 6 ALSSAISALNAQSQSLSMISDNIANSDTTGYKTTSAMFSQLVTASSSATSYASGGVTVAG 65 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWF---ALESPRGIILTRDGRFKVTDDGSLVSA 117 + G +T D A++G +F S TR+G F + + G LV++ Sbjct: 66 RANISQQGLLAATSNATDVAIQGSGFFVVSDQTSGGTTSYTRNGAFSIDNAGYLVNS 122 Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 12/101 (11%), Positives = 27/101 (26%), Gaps = 5/101 (4%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLED 201 + + I + + + G S + LE Sbjct: 321 YSNGQTIAIYKIAVATFKDPDGLSVNSYGIYSVTAASGDASVQTSGSNGAGKIYGSELES 380 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S ++ + MI Q +++ + +I K I + Sbjct: 381 STTDTSSQFASMISAQQAYSAASQVITTVNKMFDTLISAMR 421 >gi|331666546|ref|ZP_08367420.1| LfgE [Escherichia coli TA271] gi|331065770|gb|EGI37654.1| LfgE [Escherichia coli TA271] Length = 400 Score = 74.9 bits (182), Expect = 8e-12, Method: Composition-based stats. Identities = 40/187 (21%), Positives = 70/187 (37%), Gaps = 6/187 (3%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66 I A+ ++L +++N++N TVG++++ +FS + Q + +G Sbjct: 5 IAATGLNAVNEQLDGISNNIANAGTVGYKSMTTQFSAMYA-----GSQAMGVSVAGTAQS 59 Query: 67 SKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125 GS +STG LD A+ D +F +S I TR G F+ +G +V+ASG Y Sbjct: 60 ISRGGSLVSTGNALDLAINDDGFFVTCDSAGNISYTRAGSFETDKNGYIVNASGAYLQGY 119 Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185 + + G I + T + R + N Sbjct: 120 PVDDTGTLQTGTVTDIQIKTGNIPAQASSSLTFTANFNASDEAIDRTTVPFDATNSSSYT 179 Query: 186 LEDLSGV 192 + V Sbjct: 180 DSYTTTV 186 Score = 68.4 bits (165), Expect = 8e-10, Method: Composition-based stats. Identities = 25/194 (12%), Positives = 55/194 (28%), Gaps = 10/194 (5%) Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113 Q + + +TG F ++ I LT D Sbjct: 211 QYTFDGQQQTGVPATTLTFDPNTGKLTSPTTPQTIEFQTDAAAPIDLTVDYSTCTQYGSE 270 Query: 114 L-VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172 V+ + +Q+ +++ GE +G+V+ L + G Sbjct: 271 FSVTTNAANGYASATQNGVQVDDDGKVYATYSNGERMLQGQVV----LATFPNENGLEAV 326 Query: 173 ENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 + T+ G LE SN + E+ ++ + + + T +I Sbjct: 327 SGTAWVQTGESGTPLIGVPGSGTCGTLSSGVLESSNVDITSELVNLMTAQRNYQANTKVI 386 Query: 228 DENEKSMLEAIRNI 241 + + + + Sbjct: 387 ATSTQLDDALFQAM 400 >gi|331645418|ref|ZP_08346522.1| LfgE [Escherichia coli M605] gi|331045580|gb|EGI17706.1| LfgE [Escherichia coli M605] Length = 400 Score = 74.9 bits (182), Expect = 8e-12, Method: Composition-based stats. Identities = 40/187 (21%), Positives = 69/187 (36%), Gaps = 6/187 (3%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66 I A+ ++L +++N++N TVG++++ +FS + Q + +G Sbjct: 5 IAATGLNAVNEQLDGISNNIANAGTVGYKSMTTQFSAMYA-----GSQAMGVSVAGTAQS 59 Query: 67 SKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125 GS +STG LD A+ D +F +S I TR G F+ +G +V+ASG Y Sbjct: 60 ISRGGSLVSTGNALDLAINDDGFFVTCDSAGNISYTRAGSFETDKNGYIVNASGAYLQGY 119 Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185 + + G I + T R + N Sbjct: 120 PVDDTGTLQTGTVTDIQIKTGNIPAQASSSLTFTANFDASDAAIDRTTVPFDATNSSSYT 179 Query: 186 LEDLSGV 192 + V Sbjct: 180 DSYTTTV 186 Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats. Identities = 25/194 (12%), Positives = 55/194 (28%), Gaps = 10/194 (5%) Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113 Q + + +TG F ++ I LT D Sbjct: 211 QYTFDGQQQTGVPATTLTFDPNTGKLTSPTTPQTIEFQTDAAAPIDLTVDYSTCTQYGSE 270 Query: 114 L-VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172 V+ + +Q+ +++ GE +G+V+ L + G Sbjct: 271 FSVTTNAADGYASATQNGVQVDDDGKVYATYSNGERMLQGQVV----LATFPNENGLEAV 326 Query: 173 ENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 + T+ G LE SN + E+ ++ + + + T +I Sbjct: 327 SGTAWVQTGESGTPLIGVPGSGTCGTLSSGVLESSNVDITSELVNLMTAQRNYQANTKVI 386 Query: 228 DENEKSMLEAIRNI 241 + + + + Sbjct: 387 ATSTQLDDALFQAM 400 >gi|218549196|ref|YP_002382987.1| flagellar hook protein FlgE [Escherichia fergusonii ATCC 35469] gi|218356737|emb|CAQ89365.1| flagellar hook protein [Escherichia fergusonii ATCC 35469] Length = 401 Score = 74.9 bits (182), Expect = 8e-12, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 72/195 (36%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ +LV+ G Sbjct: 57 ITQDFTDGTTTNTGRGLDIAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q+ K T + S + + + N Sbjct: 117 TGYPAAGTPPTIQQGANPTNISIPNTLMAAKTTTTAAMQINLNSSDPLPTVKAFDASNAD 176 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 177 SYNKKGSVTVFDSQG 191 Score = 72.6 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + + + +++ +++ + L + ++G ++ S Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQA 337 Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + T+ G LE SN + E+ MI + + S I ++ + Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397 Query: 238 IR 239 + Sbjct: 398 VN 399 >gi|115522802|ref|YP_779713.1| flagellar hook protein FlgE [Rhodopseudomonas palustris BisA53] gi|115516749|gb|ABJ04733.1| flagellar basal body FlaE domain protein [Rhodopseudomonas palustris BisA53] Length = 421 Score = 74.9 bits (182), Expect = 8e-12, Method: Composition-based stats. Identities = 29/133 (21%), Positives = 59/133 (44%), Gaps = 3/133 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + + ++A + Q L+ ++DN++N+ TVG++T F +V + + V Sbjct: 6 ALSSAISALNSQSQSLAMISDNIANSQTVGYKTTSALFDSLVTSSSSASSYSSGGVTVLS 65 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALE---SPRGIILTRDGRFKVTDDGSLVSASGK 120 + G +T + D + G+ +F + + + TR G F + D G +V+ASG Sbjct: 66 KSNISSQGLLTTTTSSTDIGISGNGFFPVSTALNGGSTLYTRAGSFTIDDSGYMVNASGA 125 Query: 121 YPVLDMASVPIQI 133 Y + + Sbjct: 126 YLLGWRTDADGNV 138 Score = 55.6 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 13/86 (15%), Positives = 27/86 (31%), Gaps = 5/86 (5%) Query: 162 SVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + + N + T++ G LE S A++ E MI Sbjct: 336 TFAAPDQLQVKSNGLYAATADSGTAIVQQSGSNGAGTIQGGKLEASTADTNTEFSNMISA 395 Query: 217 TQKFNSITTLIDENEKSMLEAIRNIA 242 Q +++ + +I + I + Sbjct: 396 QQAYSAASQVITAVNEMFDTLISAVR 421 >gi|281306984|pdb|3A69|A Chain A, Atomic Model Of The Bacterial Flagellar Hook Based On Docking An X-Ray Derived Structure And Terminal Two Alpha- Helices Into An 7.1 Angstrom Resolution Cryoem Map Length = 402 Score = 74.9 bits (182), Expect = 8e-12, Method: Composition-based stats. Identities = 34/195 (17%), Positives = 71/195 (36%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SF+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 1 SFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 55 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ +LV+ G Sbjct: 56 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGMQL 115 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q+ K T + S V + + Sbjct: 116 TGYPATGTPPTIQQGANPAPITIPNTLMAAKSTTTASMQINLNSTDPVPSKTPFSVSDAD 175 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 176 SYNKKGTVTVYDSQG 190 Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 15/147 (10%), Positives = 45/147 (30%), Gaps = 5/147 (3%) Query: 98 IILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157 T F + + + + + + + +++ +V+ Sbjct: 254 TAATFSLSFLNSMQQNTGANNIVATNQNGYKPGDLVSYQINNDGTVVGNYSNEQEQVLGQ 313 Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQ 212 + L + ++G + ++ + + + G LE SN + E+ Sbjct: 314 IVLANFANNEGLASQGDNVWAATQASGVALLGTAGSGNFGKLTNGALEASNVDLSKELVN 373 Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIR 239 MI + + S I ++ + + Sbjct: 374 MIVAQRNYQSNAQTIKTQDQILNTLVN 400 >gi|330447903|ref|ZP_08311551.1| conserved hypothetical protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328492094|dbj|GAA06048.1| conserved hypothetical protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 398 Score = 74.9 bits (182), Expect = 9e-12, Method: Composition-based stats. Identities = 33/132 (25%), Positives = 56/132 (42%), Gaps = 6/132 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SF+I L+ A +L+T+++N++N T GF+ + +FS V + Q + Sbjct: 2 SFDIALSGLDATNVQLNTISNNIANVSTSGFKESRTEFSAVY-----NGMQAGGVEVAAI 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 + GS TG LD A+ G +F + + TR G F D ++VS +G Sbjct: 57 SQNFDKTGSITGTGRPLDLAISGSGFFVTKDHTGQTLYTRSGVFGSDKDNNIVSNNGAKL 116 Query: 123 VLDMASVPIQIP 134 + Sbjct: 117 QGYTVDANNNLQ 128 Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 13/100 (13%), Positives = 34/100 (34%), Gaps = 5/100 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLED 201 + + ++ + L QG V+ + + + + T + G LE Sbjct: 299 YTNGQSQLQGQVMLADFANPQGLVKTNGTSWIQSFSSGAPVNGAPSTGTLGGLVAGALEG 358 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 SN + E+ ++ + + + I ++K + Sbjct: 359 SNVDLTSELVSLMTAQRNYQANAKTISTSDKLTQSLFNAV 398 >gi|4378858|gb|AAD19726.1| flagellar hook protein [Zymomonas mobilis subsp. mobilis ZM4] Length = 412 Score = 74.9 bits (182), Expect = 9e-12, Method: Composition-based stats. Identities = 40/197 (20%), Positives = 73/197 (37%), Gaps = 6/197 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK-ISFVASG 62 +F L A + LS ++N++N+ + GF+ F E+V Q Sbjct: 2 AFYTSLTGLNAAQTDLSVPSNNIANSGSYGFKKTTTDFGELVADSPLASGQNIGQGTRLR 61 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESPRG----IILTRDGRFKVTDDGSLVSAS 118 GS +T LD + GD +F ++SPR I LTRDG F + ++V++ Sbjct: 62 ATIQDFTSGSMKTTNRALDMMVNGDGFFLVKSPRPPSGTISLTRDGSFLTDKNNNVVTSD 121 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178 G Y + + I E G + + + + S+ + G + + ++ Sbjct: 122 GHYLQVYATTNSGNIYNNGETG-SATGGRVVKNLTLPSYEDQVSISSATGETVQVGNNLA 180 Query: 179 PNIPPTPLEDLSGVTVK 195 T + Sbjct: 181 RTGDVTVTGTNGDTVIH 197 Score = 66.0 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 20/136 (14%), Positives = 45/136 (33%), Gaps = 7/136 (5%) Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG--KVIATMGLYSVDMSQG 168 GS ++A D + + G+ G ++ + L V+ G Sbjct: 274 TGSPITAFNPQTSTDESGDTSSALSNISVGTDGKVTATFANGNQYILGAVALGDVNNRNG 333 Query: 169 FVRRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223 N+ + + + +V+ G LE SN + E+ +I + F + Sbjct: 334 LHSTGNANWTVTGTSGSLNYREADTSGLGSVQSGALELSNIDLTQELVNLISEQRNFQAN 393 Query: 224 TTLIDENEKSMLEAIR 239 + I + + + + Sbjct: 394 SKAISTDNQMVSYVMN 409 >gi|39933722|ref|NP_945998.1| flagellar hook protein FlgE [Rhodopseudomonas palustris CGA009] gi|39647569|emb|CAE26089.1| possible flagellar hook protein FlgE [Rhodopseudomonas palustris CGA009] Length = 421 Score = 74.9 bits (182), Expect = 9e-12, Method: Composition-based stats. Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 3/117 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + + ++A A Q LS ++DN++N+DT G++T FS++V A + V Sbjct: 6 ALSSAISALNAQSQSLSMISDNIANSDTTGYKTTSAMFSQLVTASSSATSYASGGVTVAG 65 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWF---ALESPRGIILTRDGRFKVTDDGSLVSA 117 + G +T D A++G +F S TR+G F + + G LV++ Sbjct: 66 RANISQQGLLAATSNATDVAIQGSGFFVVSDQTSGGTTSYTRNGAFSIDNAGYLVNS 122 Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 12/101 (11%), Positives = 27/101 (26%), Gaps = 5/101 (4%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLED 201 + + I + + + G S + LE Sbjct: 321 YSNGQTIAIYKIAVATFKDPDGLSVNSYGIYSVTAASGDASVQTSGSNGAGKIYGSELES 380 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S ++ + MI Q +++ + +I K I + Sbjct: 381 STTDTSSQFASMISAQQAYSAASQVITTVNKMFDTLISAMR 421 >gi|56551507|ref|YP_162346.1| hypothetical protein ZMO0611 [Zymomonas mobilis subsp. mobilis ZM4] gi|56543081|gb|AAV89235.1| protein of unknown function DUF1078 domain protein [Zymomonas mobilis subsp. mobilis ZM4] Length = 411 Score = 74.9 bits (182), Expect = 9e-12, Method: Composition-based stats. Identities = 38/196 (19%), Positives = 71/196 (36%), Gaps = 5/196 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK-ISFVASG 62 +F L A + LS ++N++N+ + GF+ F E+V Q Sbjct: 2 AFYTSLTGLNAAQTDLSVTSNNIANSGSYGFKKTTTDFGELVADSPLASGQNIGQGTRLR 61 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESP---RGIILTRDGRFKVTDDGSLVSASG 119 GS +T LD + GD +F ++S I LTRDG F + ++V++ G Sbjct: 62 ATIQDFTSGSMKTTNRALDMMVNGDGFFLVKSQGASGTISLTRDGSFLTDKNNNVVTSDG 121 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 Y + + I E G + + + + S+ + G + + ++ Sbjct: 122 HYLQVYATTNSGNIYNNGETG-SATGGRVVKNLTLPSYEDQVSISSATGETVQVGNNLAR 180 Query: 180 NIPPTPLEDLSGVTVK 195 T + Sbjct: 181 TGDVTVTGTNGDTVIH 196 Score = 64.9 bits (156), Expect = 9e-09, Method: Composition-based stats. Identities = 14/94 (14%), Positives = 34/94 (36%), Gaps = 5/94 (5%) Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSNAN 205 ++ + L V+ G N+ + + + +V+ G LE SN + Sbjct: 315 NQYILGAVALGDVNNRNGLHSTGNANWTVTGTSGSLNYREADTSGLGSVQSGALELSNID 374 Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E+ +I + F + + I + + + + Sbjct: 375 LTQELVNLISEQRNFQANSKAISTDNQMVSYVMN 408 >gi|259417834|ref|ZP_05741753.1| flagellar hook protein FlgE [Silicibacter sp. TrichCH4B] gi|259346740|gb|EEW58554.1| flagellar hook protein FlgE [Silicibacter sp. TrichCH4B] Length = 422 Score = 74.9 bits (182), Expect = 9e-12, Method: Composition-based stats. Identities = 37/140 (26%), Positives = 62/140 (44%), Gaps = 9/140 (6%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 +S N G+A A RL+ ++DN++N T G++ + F +V + +N V+ Sbjct: 5 SSLNAGVAGLAANSTRLAAISDNIANASTAGYKRVVTSFESMVIS-QNGGSYAAGGVSVN 63 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALES--------PRGIILTRDGRFKVTDDGSL 114 + E S IST D A+ G + + S ++LT G F+ D+G L Sbjct: 64 NTRMIDERSSLISTSNATDLAVAGRGFLPVASLAEVDSGGDPTMLLTTSGSFRTNDEGYL 123 Query: 115 VSASGKYPVLDMASVPIQIP 134 + SG + A+ IP Sbjct: 124 TTTSGLVLLGWPANADGTIP 143 Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 12/98 (12%), Positives = 32/98 (32%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLED 201 + +++ + L + + G ++ P+ V E+ Sbjct: 322 YENGSSRIVYQIPLADMPNANGMKSLDSQTFMPSPDSGAYYLWDAGAGPTGEVASYRQEE 381 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S + E+ MI + ++S +I ++ + E Sbjct: 382 SGTDVATELTSMIQTQRAYSSNAKVIQTVDEMLQETTN 419 >gi|316936123|ref|YP_004111105.1| flagellar hook-basal body protein [Rhodopseudomonas palustris DX-1] gi|315603837|gb|ADU46372.1| flagellar hook-basal body protein [Rhodopseudomonas palustris DX-1] Length = 422 Score = 74.9 bits (182), Expect = 9e-12, Method: Composition-based stats. Identities = 32/133 (24%), Positives = 58/133 (43%), Gaps = 3/133 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + + ++A A Q L+ ++DN++N+ TVG++T FS++V A V Sbjct: 6 ALSSAISALNAQSQSLAMISDNIANSQTVGYKTTSASFSQLVTAASGASTYSSGGVTVLA 65 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA---LESPRGIILTRDGRFKVTDDGSLVSASGK 120 G +T + D + G+ +F + + TR G F + + G LV+ASG Sbjct: 66 RSNITTQGLLTTTTSSTDIGISGNGFFPVTTAVTGGTTLYTRGGSFTLDNSGYLVNASGA 125 Query: 121 YPVLDMASVPIQI 133 Y + + Sbjct: 126 YLLGWRTDADGNV 138 Score = 48.3 bits (113), Expect = 9e-04, Method: Composition-based stats. Identities = 14/101 (13%), Positives = 35/101 (34%), Gaps = 5/101 (4%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLED 201 + K I + + + + ++N + + +++ G LE Sbjct: 322 YSNGKTTTIYKVPVATFAAADQLEAKDNGMYAATLASGTAVVQLSGTNGAGSIEGGVLEA 381 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S +++ E MI Q +++ + +I + I I Sbjct: 382 STSDTNTEFSSMISAQQAYSAASQVISAVNEMYDTLISAIR 422 >gi|238793998|ref|ZP_04637616.1| Flagellar hook protein FlgE [Yersinia intermedia ATCC 29909] gi|238726630|gb|EEQ18166.1| Flagellar hook protein FlgE [Yersinia intermedia ATCC 29909] Length = 425 Score = 74.9 bits (182), Expect = 9e-12, Method: Composition-based stats. Identities = 33/192 (17%), Positives = 68/192 (35%), Gaps = 11/192 (5%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 F+ ++ A L + +N++N+ T GF+ V F+++ Q V Sbjct: 2 GFSQAVSGLNAASSNLDVIGNNIANSATSGFKAGSVSFADMFA-----GSQTGMGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +T LD A+ +F ++ G+ R+G+FK+ ++ ++V+ G Sbjct: 57 ITQDFNDGTPTTTNRRLDLAISQSGFFRMQDSSGGVFFARNGQFKLDENRNIVNMQGLSL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ + +S +IA S +M + + P Sbjct: 117 TGYPATGTPP-----TVQQGANPVPLSIPQDMIAAKATTSGNMVANLTSTHDVITATFDP 171 Query: 183 PTPLEDLSGVTV 194 P + Sbjct: 172 QKPDTYSFVNNM 183 Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 22/210 (10%), Positives = 53/210 (25%), Gaps = 8/210 (3%) Query: 35 RTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES 94 + ++ S + + + S + DF L + Sbjct: 217 KDSSGTLADATKPFDPADPAAASLRGTMVFDTNGALKSVKNGAGTTDFNLTVPMAVVNGA 276 Query: 95 PRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV 154 P K + G + + + +Q+ ++ Sbjct: 277 PAQTFALNVAGSKQQNTG---TDGIVTQNQTGYAAGEFTGFQINNDGSVVGTYSNQQTQL 333 Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYE 209 + + L + +G ++ T+ G LE SN + E Sbjct: 334 LGQIVLVNFSNPEGLSPEGDNVWKETKSSGNPILGTAGGGGFGTLTSGALESSNVDLSKE 393 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + MI + + S I ++ + + Sbjct: 394 LVNMIVAQRNYQSNAQTIKTQDQILQTLVN 423 >gi|297568486|ref|YP_003689830.1| fagellar hook-basal body protein [Desulfurivibrio alkaliphilus AHT2] gi|296924401|gb|ADH85211.1| fagellar hook-basal body protein [Desulfurivibrio alkaliphilus AHT2] Length = 636 Score = 74.9 bits (182), Expect = 9e-12, Method: Composition-based stats. Identities = 28/189 (14%), Positives = 61/189 (32%), Gaps = 8/189 (4%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 G++ ++ ++ + DN++N +TV ++ + F V+ + ++ + + Sbjct: 5 NMMFNGMSGINSMAGNMAVLGDNVANINTVSYKNSQTTFQNVLTSSQDRFHEVGNGSQIQ 64 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDG-------RFKVTDDGSL 114 + G T D A+ G +F + + TRDG + +L Sbjct: 65 AISKNFRPGPLEQTTKATDMAIGGKGFFMVNDYNGETLYTRDGQFDLKVEDYTPAGFYNL 124 Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174 V+ +G Q +I + + + +A S Sbjct: 125 VTPAGYRVQGLNLDYGNGNGQPGDILVRRDSLPQATENVTLALNLQSSAAPPTDTTSLYE 184 Query: 175 SGISPNIPP 183 S PP Sbjct: 185 SWNGAATPP 193 Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 15/134 (11%), Positives = 36/134 (26%), Gaps = 5/134 (3%) Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170 S+S + D + + + + A + L G + Sbjct: 501 TNYATSSSTIFQDQDGYGAGVLQNVSVKPDGTIVGNYSNGQSHDQAQVMLADFANYHGLI 560 Query: 171 RRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225 N+ + + + V LE SN + + + + F + + Sbjct: 561 PGSNNTYQASAQSGDPVIGTPGSGVFGQVLGSSLEGSNVDLARQFADLTMTQRIFQANSK 620 Query: 226 LIDENEKSMLEAIR 239 I ++ +R Sbjct: 621 SITTADEIHQTLMR 634 >gi|158422271|ref|YP_001523563.1| flagellar hook protein FlgE [Azorhizobium caulinodans ORS 571] gi|158329160|dbj|BAF86645.1| flagellar basal body FlaE protein [Azorhizobium caulinodans ORS 571] Length = 430 Score = 74.9 bits (182), Expect = 9e-12, Method: Composition-based stats. Identities = 34/192 (17%), Positives = 68/192 (35%), Gaps = 3/192 (1%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 ++ A +L T++DN++N++T G++ FS ++ + + V + Sbjct: 7 LRTSVSGMNAQSNKLGTISDNIANSNTTGYKKATTDFSSLI-VDSSTSEYNSGSVNTKIS 65 Query: 65 YLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTD-DGSLVSASGKYP 122 Y + G+ S+ + D + GD +F ++ G TR G F V G+LV+ +G Sbjct: 66 YDISKQGTTTSSTSATDMMVNGDGFFVVQDGGGSTYLTRAGSFTVDATTGNLVNTAGYTL 125 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + S + I ++ + SG +P Sbjct: 126 MGYDISKGNNVTPVVNSTAGMVPVNIGSIALAAVPTTSGTMTANLQSTSAVVSGATPGGN 185 Query: 183 PTPLEDLSGVTV 194 +V Sbjct: 186 TAAATYTYKSSV 197 Score = 63.0 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 10/94 (10%), Positives = 28/94 (29%), Gaps = 5/94 (5%) Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNAN 205 + + + +V + ++ T+K LE+SN + Sbjct: 334 NTTNLYRIPVATVKSPDNLTPVSGNAYQVTQESGAMQIGLSGSAGVGTIKSNTLENSNVD 393 Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E+ MI + + + + + + + Sbjct: 394 VASELTDMIVAQRDYTANSKVFQTGTDLLDVLMN 427 >gi|77464881|ref|YP_354385.1| putative flagellar hook protein [Rhodobacter sphaeroides 2.4.1] gi|126463723|ref|YP_001044837.1| hypothetical protein Rsph17029_2963 [Rhodobacter sphaeroides ATCC 17029] gi|221640802|ref|YP_002527064.1| hypothetical protein RSKD131_2703 [Rhodobacter sphaeroides KD131] gi|332559780|ref|ZP_08414102.1| FlgE2 [Rhodobacter sphaeroides WS8N] gi|77389299|gb|ABA80484.1| putative flagellar hook protein [Rhodobacter sphaeroides 2.4.1] gi|126105387|gb|ABN78065.1| protein of unknown function DUF1078 domain protein [Rhodobacter sphaeroides ATCC 17029] gi|221161583|gb|ACM02563.1| Hypothetical Protein RSKD131_2703 [Rhodobacter sphaeroides KD131] gi|332277492|gb|EGJ22807.1| FlgE2 [Rhodobacter sphaeroides WS8N] Length = 465 Score = 74.9 bits (182), Expect = 9e-12, Method: Composition-based stats. Identities = 36/164 (21%), Positives = 64/164 (39%), Gaps = 10/164 (6%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV-GAIKNDIDQKISFVAS 61 +S N G+A A +L+T+ADN++N+ T G++ F +V N V + Sbjct: 5 SSLNAGVAGLNANATKLATIADNIANSGTYGYKRADADFESMVITQSANGGSYAAGGVRA 64 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG---------IILTRDGRFKVTDDG 112 +E G+ +ST + LD A+ G + +++TR G F G Sbjct: 65 NTIRRVEEWGAPVSTASALDIAISGRGMLPVIRETSLGASSGNEALLMTRTGSFATDPSG 124 Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156 L + +G + A+ IP + + + A Sbjct: 125 VLKTDTGLVLLGWPATADGTIPTMSRDSIAQLEPVVIAANQTAA 168 Score = 68.4 bits (165), Expect = 8e-10, Method: Composition-based stats. Identities = 15/103 (14%), Positives = 30/103 (29%), Gaps = 5/103 (4%) Query: 142 VGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKR 196 + +VI + L V G N + + D V Sbjct: 360 FMRATYDTGFTRVIYQVPLVDVPNYNGLTALNNQTFAISPDSGNFYLWDAGDGPTGDVLG 419 Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E S + E+ +I + ++S +I ++ + E Sbjct: 420 YAREGSTTDVATELTNLIQTQRAYSSNAKIIQTVDEMLQETTN 462 >gi|207108222|ref|ZP_03242384.1| flagellar basal-body rod protein (flgG) [Helicobacter pylori HPKX_438_CA4C1] Length = 137 Score = 74.9 bits (182), Expect = 9e-12, Method: Composition-based stats. Identities = 34/137 (24%), Positives = 56/137 (40%), Gaps = 18/137 (13%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDID---- 53 MQ + A RL ++N++N +T GF+ F + + + Sbjct: 1 MQNGYYAATGAMATQFNRLDLTSNNLANLNTNGFKRDDAITGDFLRLYQQYREQLPLEDQ 60 Query: 54 ----------QKISFVASGKEYLSKEVGSFISTGTELDFALE-GDAWFALESPRGIILTR 102 + Y + +G+F T LDFAL + +FA+++ G+ TR Sbjct: 61 TKASAKYLNRNLNRVPILSEIYTDRSLGAFEETHNPLDFALTSPNLYFAIQTNEGVAYTR 120 Query: 103 DGRFKVTDDGSLVSASG 119 DG F V DG LV+ +G Sbjct: 121 DGHFSVDKDGFLVTLNG 137 >gi|149189836|ref|ZP_01868116.1| flagellar hook protein E [Vibrio shilonii AK1] gi|148836322|gb|EDL53279.1| flagellar hook protein E [Vibrio shilonii AK1] Length = 398 Score = 74.9 bits (182), Expect = 9e-12, Method: Composition-based stats. Identities = 31/131 (23%), Positives = 54/131 (41%), Gaps = 6/131 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SF+I L+ A +L+T++ N++N T GF+ + +FS V + Q + Sbjct: 2 SFDIALSGLDATNTQLNTISHNIANASTYGFKEARTEFSAVY-----NGMQAGGVEVASI 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122 + GS TG +D A+ G+ +F + + TR G F D +V +G Sbjct: 57 SQNFDKNGSVSGTGRAMDLAINGNGFFVTKDHMGQTLYTRAGVFGTDKDNYVVGNTGAKL 116 Query: 123 VLDMASVPIQI 133 + Sbjct: 117 QGYGVDSNNNL 127 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 17/134 (12%), Positives = 44/134 (32%), Gaps = 9/134 (6%) Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172 VS + +++ +F G+ +G+V+ L + QG + Sbjct: 269 FGVSTNNPNGYTSGELAGVRVEDNGMVFATYTNGQSQLQGQVV----LANFANPQGLAKT 324 Query: 173 ENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 + + + + + + G LE SN + E+ ++ + + + I Sbjct: 325 NGTAWTQSYGSGAPVMGTPGSGVLGDLTPGALEGSNVDLTSELVNLMTAQRNYQANAKTI 384 Query: 228 DENEKSMLEAIRNI 241 ++K + Sbjct: 385 STSDKLTQALFNAV 398 >gi|170021360|ref|YP_001726314.1| flagellar basal body FlaE domain-containing protein [Escherichia coli ATCC 8739] gi|169756288|gb|ACA78987.1| flagellar basal body FlaE domain protein [Escherichia coli ATCC 8739] Length = 400 Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 40/187 (21%), Positives = 69/187 (36%), Gaps = 6/187 (3%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66 I A+ ++L +++N++N TVG++++ +FS + Q + +G Sbjct: 5 IAATGLNAVNEQLDGISNNIANAGTVGYKSMTTQFSAMYA-----GSQAMGVSVAGTAQS 59 Query: 67 SKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125 GS +STG LD A+ D +F +S I TR G F+ +G +V+ASG Y Sbjct: 60 ISRGGSLVSTGNALDLAINDDGFFVTCDSAGNISYTRAGSFETDKNGYIVNASGAYLQGY 119 Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185 + + G I + T R + N Sbjct: 120 PVDDSGTLQTGTVTDIQIKTGNIPAQASSSLTFTANFDASDAAIDRTTVPFDATNSSSYT 179 Query: 186 LEDLSGV 192 + V Sbjct: 180 DSYTTTV 186 Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats. Identities = 25/194 (12%), Positives = 55/194 (28%), Gaps = 10/194 (5%) Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113 Q + + +TG F ++ I LT D Sbjct: 211 QYTFDGQQQTGVPATTLTFDPNTGKLTSPTTPQTIEFQTDAAAPIDLTVDYSTCTQYGSE 270 Query: 114 L-VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172 V+ + +Q+ +++ GE +G+V+ L + G Sbjct: 271 FSVTTNAANGYASATQNGVQVDDDGKVYATYSNGERMLQGQVV----LATFPNENGLEAV 326 Query: 173 ENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 + T+ G LE SN + E+ ++ + + + T +I Sbjct: 327 SGTAWVQTGESGTPLIGVPGSGTCGTLSSGVLESSNVDITSELVNLMTAQRNYQANTKVI 386 Query: 228 DENEKSMLEAIRNI 241 + + + + Sbjct: 387 ATSTQLDDALFQAM 400 >gi|188494513|ref|ZP_03001783.1| Flagellar basal body protein FlgE [Escherichia coli 53638] gi|188489712|gb|EDU64815.1| Flagellar basal body protein FlgE [Escherichia coli 53638] Length = 400 Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 40/187 (21%), Positives = 69/187 (36%), Gaps = 6/187 (3%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66 I A+ ++L +++N++N TVG++++ +FS + Q + +G Sbjct: 5 IAATGLNAVNEQLDGISNNIANAGTVGYKSMTTQFSAMYA-----GSQAMGVSVAGTAQS 59 Query: 67 SKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125 GS +STG LD A+ D +F +S I TR G F+ +G +V+ASG Y Sbjct: 60 ISRGGSLVSTGNALDLAINDDGFFVTCDSAGNISYTRAGSFETDKNGYIVNASGAYLQGY 119 Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185 + + G I + T R + N Sbjct: 120 PVDDTGTLQTGTVTDIQIKTGNIPAQASSSLTFTANFDASDAAIDRTTVPFDATNSSSYT 179 Query: 186 LEDLSGV 192 + V Sbjct: 180 DSYTTTV 186 Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats. Identities = 25/194 (12%), Positives = 55/194 (28%), Gaps = 10/194 (5%) Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113 Q + + +TG F ++ I LT D Sbjct: 211 QYTFDGQQQTGVPATTLTFDPNTGKLTSPTTPQTIEFQTDAAAPIDLTVDYSTCTQYGSE 270 Query: 114 L-VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172 V+ + +Q+ +++ GE +G+V+ L + G Sbjct: 271 FSVTTNAANGYASATQNGVQVDDDGKVYATYSNGERMLQGQVV----LATFPNENGLEAV 326 Query: 173 ENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 + T+ G LE SN + E+ ++ + + + T +I Sbjct: 327 SGTAWVQTGESGTPLIGVPGSGTCGTLSSGVLESSNVDITSELVNLMTAQRNYQANTKVI 386 Query: 228 DENEKSMLEAIRNI 241 + + + + Sbjct: 387 ATSTQLDDALFQAM 400 >gi|257484946|ref|ZP_05638987.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 120 Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 27/120 (22%), Positives = 49/120 (40%), Gaps = 3/120 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + ++ A+N++N T GF + + + ++ ++ Sbjct: 1 MDKLLYVAMSGASENAIAQKAHANNLANVSTNGFMRDLEQARSM--PVFGEVMPSRAYAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 S + G+ + TG ELD A++GD W A+++P G TR + G L SG Sbjct: 59 SERPGTDFSAGAMVETGRELDIAVKGDGWIAVQTPDGGEAYTRSSGMNIDALGVLRDGSG 118 >gi|168234103|ref|ZP_02659161.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194468943|ref|ZP_03074927.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194455307|gb|EDX44146.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205331935|gb|EDZ18699.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 425 Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 34/195 (17%), Positives = 71/195 (36%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SF+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 SFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ +LV+ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGMQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q+ K T + S +N + Sbjct: 117 TGYPATGTPPTIQQGANPAPITIPNTLMAAKSTTTASMQVNLNSTDAKPAKNPFDPSDAN 176 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 177 TYNKKGSITVYDSQG 191 Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 13/122 (10%), Positives = 39/122 (31%), Gaps = 5/122 (4%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + + + +++ +V+ + L + ++G + ++ + Sbjct: 302 NQNGYKPGDLVSYQINNDGTVVGNYSNEQEQVLGQIVLANFANNEGLASQGDNVWAATQA 361 Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + + G LE SN + E+ MI + + S I ++ + Sbjct: 362 SGVALLGTAGSGNFGKLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 421 Query: 238 IR 239 + Sbjct: 422 VN 423 >gi|157371207|ref|YP_001479196.1| flagellar hook protein FlgE [Serratia proteamaculans 568] gi|157322971|gb|ABV42068.1| flagellar basal body FlaE domain protein [Serratia proteamaculans 568] Length = 407 Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 14/123 (11%), Positives = 34/123 (27%), Gaps = 5/123 (4%) Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 D + +Q+ +V+ + + + +G + ++ Sbjct: 283 VSQDGYGAGEYTNFQINNDGTVVGIYSNQQTQVLGQIVMANFSNPEGLSSQGDNVWQETG 342 Query: 182 PPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + G LE SN + E+ MI + + S I + + Sbjct: 343 ASGQPRVGIAGGGGFGKLTSGALEASNVDLSQELVNMIVAQRNYQSNAQTIKTQDSILQT 402 Query: 237 AIR 239 + Sbjct: 403 LVS 405 Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 61/134 (45%), Gaps = 6/134 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ V F+++ Q V Sbjct: 2 AFSQAVSGLNAAATNLDVIGNNIANSATSGFKSGTVSFADMFA-----GSQVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122 + + G+ T LD A+ G+ +F ++ G+ +R+G+FK+ ++ +L + G Sbjct: 57 ITQNFKGGTTTGTSRALDVAISGNGFFRMQDQDGGVFYSRNGQFKLDENRNLTNMQGLQL 116 Query: 123 VLDMASVPIQIPQK 136 A+ Q+ Sbjct: 117 TGYPAAGTPPTIQQ 130 >gi|126176156|ref|YP_001052305.1| flagellar hook protein FlgE [Shewanella baltica OS155] gi|304412508|ref|ZP_07394114.1| fagellar hook-basal body protein [Shewanella baltica OS183] gi|307307167|ref|ZP_07586905.1| fagellar hook-basal body protein [Shewanella baltica BA175] gi|125999361|gb|ABN63436.1| flagellar basal body FlaE domain protein [Shewanella baltica OS155] gi|304349150|gb|EFM13562.1| fagellar hook-basal body protein [Shewanella baltica OS183] gi|306910406|gb|EFN40837.1| fagellar hook-basal body protein [Shewanella baltica BA175] Length = 395 Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 6/133 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SFNI L+ A Q L+T+++N++N T GFR + +F+ + + Q Sbjct: 2 SFNIALSGLQATTQDLNTISNNIANASTSGFRGGRSEFASIY-----NGGQAGGVGVMST 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLVSASGKYP 122 + GS TG +LD ++G+ +F L+ G R G F +G + G Sbjct: 57 SQNFSKGGSLTYTGRQLDMGIQGEGFFVLKGNDGGAMYARAGMFHKDSEGFITDPVGSRL 116 Query: 123 VLDMASVPIQIPQ 135 + +I Q Sbjct: 117 QGYSVNATGKIQQ 129 Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 18/143 (12%), Positives = 37/143 (25%), Gaps = 6/143 (4%) Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI-ATMGLYSV 163 + + ++ N G + + + L + Sbjct: 253 DINFDKSTQYAAKYNNSSLSQDGYTSGELKGVRLDDNGMLYGTYTNGQDQLQGQVILANF 312 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRG-----FLEDSNANSMYEMGQMIHLTQ 218 G N+ S T G +LE SN ++ EM ++ + Sbjct: 313 SNPNGLSAVSNNAWVATNTAGQAITGSPSTGTMGTVTGGYLEGSNVDTTAEMVNLMSAQR 372 Query: 219 KFNSITTLIDENEKSMLEAIRNI 241 + S ++D N + I Sbjct: 373 NYQSNAKVLDVNSTMQQALLNAI 395 >gi|238762359|ref|ZP_04623330.1| Lateral flagellar hook protein (FlgE-like) [Yersinia kristensenii ATCC 33638] gi|238699344|gb|EEP92090.1| Lateral flagellar hook protein (FlgE-like) [Yersinia kristensenii ATCC 33638] Length = 397 Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 36/132 (27%), Positives = 65/132 (49%), Gaps = 6/132 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SF+I A+ ++L+T+++N++N+ T GF++ + +FS + Q + SG Sbjct: 2 SFSIANTGLSAVTEQLNTISNNIANSATKGFKSGRTEFSSMYAQ-----SQPLGVGVSGT 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASGKYP 122 ++ GS TG +D A+ G+ +F +++ TR G F ++G LV+ASG Sbjct: 57 SQSIRKEGSIDRTGNAMDLAISGNGFFVVKNSNGDEAYTRAGMFTTDNNGLLVNASGMKL 116 Query: 123 VLDMASVPIQIP 134 A I Sbjct: 117 QGYSADATGNIQ 128 Score = 68.4 bits (165), Expect = 7e-10, Method: Composition-based stats. Identities = 14/94 (14%), Positives = 34/94 (36%), Gaps = 5/94 (5%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSM 207 + + L + + G + + S + T ++ G LE SN + Sbjct: 304 MLQGKLALANFANANGLAAQNGTTWSATSKSGAALLGAPGTGLLGGIEVGALEASNVDLT 363 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 E+ ++ + + + T +I N+ M + + Sbjct: 364 AELVGLMTAQRNYQANTKIISTNDSMMNALFQVL 397 >gi|333004885|gb|EGK24405.1| flagellar hook protein flgE [Shigella flexneri VA-6] Length = 399 Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 32/195 (16%), Positives = 71/195 (36%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ +L++ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLLNMQGLQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q+ K T + S + + N Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNAD 176 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 177 SYNKKGSVTVFDSQG 191 Score = 71.1 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + + + +++ +++ + L + ++G ++ S Sbjct: 276 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 335 Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + T+ G LE SN + E+ MI + + S I ++ + Sbjct: 336 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTR 395 Query: 238 IR 239 + Sbjct: 396 VN 397 >gi|260431756|ref|ZP_05785727.1| flagellar hook protein FlgE [Silicibacter lacuscaerulensis ITI-1157] gi|260415584|gb|EEX08843.1| flagellar hook protein FlgE [Silicibacter lacuscaerulensis ITI-1157] Length = 439 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 8/140 (5%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 +S N G+AA A RL+T++DN++N+ T G++ ++ F +V A + V + Sbjct: 13 SSLNAGVAALKANANRLATISDNIANSSTFGYKRVETDFHSMVTAGQGGSYSAG-GVRTT 71 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-------ILTRDGRFKVTDDGSLV 115 + L + GS ++T D A++G + I +LT G F+ +G LV Sbjct: 72 SQRLIDQRGSLVTTNNSTDLAVQGRGLLPVRPSSQIGTPSNEMLLTTTGSFRTNAEGYLV 131 Query: 116 SASGKYPVLDMASVPIQIPQ 135 + SG + A+ IP Sbjct: 132 TESGLVLLGWPANSDGSIPN 151 Score = 68.0 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 14/120 (11%), Positives = 37/120 (30%), Gaps = 5/120 (4%) Query: 125 DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP- 183 D ++V + + + + + + L V G + +P+ Sbjct: 317 DGSAVGTMASVEIDENGYVYALYDTGVTRRMYQIPLADVPNPNGLTALNSQTYAPSRESG 376 Query: 184 ----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + + E+S + E+ MI + ++S +I ++ + E Sbjct: 377 TYFLWNAGEGPTGELISFAREESTTDVATELTSMIQTQRAYSSSAKVIQTVDEMLQETTN 436 >gi|237799636|ref|ZP_04588097.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022491|gb|EGI02548.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv. oryzae str. 1_6] Length = 121 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 27/120 (22%), Positives = 49/120 (40%), Gaps = 3/120 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + ++ A+N++N T GF + + + ++ ++ Sbjct: 1 MDKLLYVAMSGASENAIAQKAHANNLANVSTNGFMRDLEQARSM--PVFGEVMPSRAYAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 S + G+ + TG ELD A++GD W A+++P G TR + G L SG Sbjct: 59 SERPGTDFSAGAMVQTGRELDIAVKGDGWIAVQTPDGGEAYTRSSGMNIDALGVLRDGSG 118 >gi|323975930|gb|EGB71024.1| fagellar hook-basal body protein [Escherichia coli TW10509] Length = 400 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 41/187 (21%), Positives = 69/187 (36%), Gaps = 6/187 (3%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66 I A+ ++L +++N++N TVG++++ +FS + Q + +G Sbjct: 5 IAATGLNAVNEQLDGISNNIANAGTVGYKSMTTQFSAMYA-----GSQAMGVSVAGTAQS 59 Query: 67 SKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125 GS +STG LD A+ D +F + +S I TR G F+ DG +V+ASG Y Sbjct: 60 ISRGGSLVSTGNALDLAINDDGFFVMCDSAGNISYTRAGSFETDKDGYIVNASGAYLQGY 119 Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185 + + G I + T R N Sbjct: 120 PVDDSGTLQTGTVTDIQIKTGNIPAQASSSLTFTANFDASDDAIDRTTVPFDPTNSSSYT 179 Query: 186 LEDLSGV 192 + V Sbjct: 180 DSYTTTV 186 Score = 68.7 bits (166), Expect = 6e-10, Method: Composition-based stats. Identities = 25/194 (12%), Positives = 55/194 (28%), Gaps = 10/194 (5%) Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113 Q + + +TG F ++ I LT D Sbjct: 211 QYTFDGQQQTGVPATTLTFDPNTGKLTSPTTPQTIEFQTDAAAPIDLTVDYSTCTQYGSE 270 Query: 114 L-VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172 V+ + +Q+ +++ GE +G+V+ L + G Sbjct: 271 FSVTTNSANGYASATQNGVQVDDDGKVYATYSNGERMLQGQVV----LATFPNENGLEAV 326 Query: 173 ENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 + T+ G LE SN + E+ ++ + + + T +I Sbjct: 327 SGTAWVQTGESGTPLIGVPGSGTCGTLSSGVLESSNVDITSELVNLMTAQRNYQANTKVI 386 Query: 228 DENEKSMLEAIRNI 241 + + + + Sbjct: 387 ATSTQLDDALFQAM 400 >gi|260752886|ref|YP_003225779.1| hypothetical protein Za10_0647 [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258552249|gb|ACV75195.1| protein of unknown function DUF1078 domain protein [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 417 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 35/198 (17%), Positives = 66/198 (33%), Gaps = 4/198 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK-NDIDQKISFVASG 62 +F L A + LS ++N++N+ + GF+ F E+V Sbjct: 2 AFYTSLTGLNAAQTDLSVTSNNIANSGSYGFKKTTTDFGELVADSPYASAKNIGQGTRLR 61 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESP---RGIILTRDGRFKVTDDGSLVSASG 119 GS +T LD + GD +F ++S I LTRDG F + ++V++ G Sbjct: 62 ATIQDFTSGSMKTTNRALDMMVNGDGFFLVKSQGASGTISLTRDGSFLTDKNNNVVTSDG 121 Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 Y + + I + + + + V+ N+ + Sbjct: 122 HYLQVYATTNSGDIYNNGQTGSATGGRTVKNLTLPSYEDQVSISATDGNTVQVGNNLAAT 181 Query: 180 NIPPTPLEDLSGVTVKRG 197 + + G Sbjct: 182 GTVKIGGTVIENAKITLG 199 Score = 64.9 bits (156), Expect = 8e-09, Method: Composition-based stats. Identities = 14/94 (14%), Positives = 34/94 (36%), Gaps = 5/94 (5%) Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPN-----IPPTPLEDLSGVTVKRGFLEDSNAN 205 ++ + L V+ G N+ + + + +V+ G LE SN + Sbjct: 321 NQYILGAVALGDVNNRNGLHSTGNANWTVTGTSGSLNYREADTSGLGSVQSGALELSNID 380 Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E+ +I + F + + I + + + + Sbjct: 381 LTQELVNLISEQRNFQANSKAISTDNQMVSYVMN 414 >gi|293395583|ref|ZP_06639866.1| flagellar hook protein FlgE [Serratia odorifera DSM 4582] gi|291421902|gb|EFE95148.1| flagellar hook protein FlgE [Serratia odorifera DSM 4582] Length = 411 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 30/134 (22%), Positives = 61/134 (45%), Gaps = 6/134 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ V F+++ Q V Sbjct: 2 AFSQAVSGLNAAATNLDVIGNNIANSATAGFKSGSVSFADMFA-----GSQVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASGKYP 122 + G+ ST LD A+ + +F ++ GI +R+G+FK+ ++ +LV+ G Sbjct: 57 ITQNFNGGTTTSTNRALDVAITENGFFRMQDSDGGIFYSRNGQFKLDENRNLVNMQGLNL 116 Query: 123 VLDMASVPIQIPQK 136 A+ Q+ Sbjct: 117 TGYPAAGTPPTIQQ 130 Score = 72.2 bits (175), Expect = 5e-11, Method: Composition-based stats. Identities = 15/123 (12%), Positives = 36/123 (29%), Gaps = 5/123 (4%) Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 + + + E +Q+ +V+ + L + +G + ++ Sbjct: 287 VAQNGYTAGEYNNFQIEKDGTVVGIYSNQQKQVLGQIVLANFSNPEGLASKGDNVWQETG 346 Query: 182 PPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + G LE SN + E+ MI + + S I + + Sbjct: 347 ASGQPRVGTAGGGGFGNLTSGALEASNVDLSQELVNMIVAQRNYQSNAQTIKTQDSILQT 406 Query: 237 AIR 239 + Sbjct: 407 LVS 409 >gi|306813303|ref|ZP_07447496.1| flagellar basal body FlaE domain-containing protein [Escherichia coli NC101] gi|305854066|gb|EFM54505.1| flagellar basal body FlaE domain-containing protein [Escherichia coli NC101] Length = 400 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 40/187 (21%), Positives = 69/187 (36%), Gaps = 6/187 (3%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66 I A+ ++L +++N++N TVG++++ +FS + Q + +G Sbjct: 5 IAATGLNAVNEQLDGISNNIANAGTVGYKSMTTQFSAMYA-----GSQAMGVSVAGTAQS 59 Query: 67 SKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125 GS +STG LD A+ D +F +S I TR G F+ +G +V+ASG Y Sbjct: 60 ISRGGSLVSTGNALDLAINDDGFFVTCDSAGNISYTRAGSFETDKNGYIVNASGAYLQGY 119 Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185 + + G I + T R + N Sbjct: 120 PVDDTGTLQTGTVTDIQIKTGNIPAQASSSLTFTANFDASDAAIDRTTVPFDATNSSSYT 179 Query: 186 LEDLSGV 192 + V Sbjct: 180 DSYTTTV 186 Score = 68.4 bits (165), Expect = 9e-10, Method: Composition-based stats. Identities = 25/194 (12%), Positives = 55/194 (28%), Gaps = 10/194 (5%) Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113 Q + + +TG F ++ I LT D Sbjct: 211 QYTFDGQQQTGVPATTLTFDPNTGKLTSPNTPQTIEFQTDAAAPIDLTVDYSSCTQYGSE 270 Query: 114 L-VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172 V+ + +Q+ +++ GE +G+V+ L + G Sbjct: 271 FSVTTNAANGYASATQNGVQVDDDGKVYATYSNGERMLQGQVV----LATFPNENGLEAV 326 Query: 173 ENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 + T+ G LE SN + E+ ++ + + + T +I Sbjct: 327 SGTAWVQTGESGTPLIGVPGSGTCGTLSSGVLESSNVDITSELVNLMTAQRNYQANTKVI 386 Query: 228 DENEKSMLEAIRNI 241 + + + + Sbjct: 387 ATSTQLDDALFQAM 400 >gi|322616547|gb|EFY13456.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322620512|gb|EFY17376.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622506|gb|EFY19351.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629657|gb|EFY26432.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322632623|gb|EFY29369.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636882|gb|EFY33585.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641580|gb|EFY38218.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644070|gb|EFY40616.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650030|gb|EFY46448.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653955|gb|EFY50278.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658487|gb|EFY54749.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322663345|gb|EFY59547.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322670079|gb|EFY66219.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674857|gb|EFY70948.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676673|gb|EFY72740.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682595|gb|EFY78614.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686652|gb|EFY82631.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323195766|gb|EFZ80942.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198342|gb|EFZ83446.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323203174|gb|EFZ88204.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323209177|gb|EFZ94114.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323209681|gb|EFZ94610.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217863|gb|EGA02578.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323222151|gb|EGA06535.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323224923|gb|EGA09181.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229665|gb|EGA13788.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323232890|gb|EGA16986.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240625|gb|EGA24667.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323242939|gb|EGA26960.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323250256|gb|EGA34145.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323252631|gb|EGA36469.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323258841|gb|EGA42494.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323261030|gb|EGA44623.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266939|gb|EGA50424.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323269980|gb|EGA53429.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 403 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 34/195 (17%), Positives = 71/195 (36%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SF+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 SFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ +LV+ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGMQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q+ K T + S V + + Sbjct: 117 TGYPATGTPPTIQQGANPAPITIPNTLMAAKSTTTASMQINLNSTDPVPSKTPFSVSDAD 176 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 177 SYNKKGTVTVYDSQG 191 Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 15/147 (10%), Positives = 45/147 (30%), Gaps = 5/147 (3%) Query: 98 IILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157 T F + + + + + + + +++ +V+ Sbjct: 255 TAATFSLSFLNSMQQNTGANNIIATNQNGYKPGDLVSYQINNDGTVVGNYSNEQEQVLGQ 314 Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQ 212 + L + ++G + ++ + + + G LE SN + E+ Sbjct: 315 IVLANFANNEGLASQGDNVWAATQASGVALLGTAGSGNFGKLTNGALEASNVDLSKELVN 374 Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIR 239 MI + + S I ++ + + Sbjct: 375 MIVAQRNYQSNAQTIKTQDQILNTLVN 401 >gi|306814075|ref|ZP_07448248.1| flagellar hook protein FlgE [Escherichia coli NC101] gi|305852712|gb|EFM53160.1| flagellar hook protein FlgE [Escherichia coli NC101] Length = 401 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 72/195 (36%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ L + +N++N+ T GF++ F+++ + V Sbjct: 2 AFSQAVSGLNVAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ +LV+ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q+ K T + S + N+ + N Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPSVNTFDASNAD 176 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 177 SYNKKGSVTVFDSQG 191 Score = 72.2 bits (175), Expect = 5e-11, Method: Composition-based stats. Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + + + +++ +++ + L + ++G ++ S Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 337 Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + T+ G LE SN + E+ MI + + S I ++ + Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397 Query: 238 IR 239 + Sbjct: 398 VN 399 >gi|218681813|ref|ZP_03529560.1| flagellar hook protein FlgE [Rhizobium etli CIAT 894] Length = 400 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 17/121 (14%), Positives = 35/121 (28%), Gaps = 1/121 (0%) Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178 + V I + + + + + G V N Sbjct: 278 NGQAASPVKDVTIDGDGIVYAKYEDGTNKPLYRIPLANVASPDKLTLMSGNVYSANGQSG 337 Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 + P + T+K G LE SN + E+ +MI + + + + + M + Sbjct: 338 VTVTGFPQTNG-LGTIKSGALEGSNVDLAGELTEMIEAQRSYTANSKVFQTGSDIMDVLV 396 Query: 239 R 239 Sbjct: 397 N 397 >gi|312884834|ref|ZP_07744526.1| flagellar hook protein FlgE [Vibrio caribbenthicus ATCC BAA-2122] gi|309367486|gb|EFP95046.1| flagellar hook protein FlgE [Vibrio caribbenthicus ATCC BAA-2122] Length = 398 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 34/131 (25%), Positives = 52/131 (39%), Gaps = 6/131 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SFNI L+ A L+T++ N++N T GF+ + +FS V + Q + Sbjct: 2 SFNIALSGLDATNTDLNTISHNIANASTTGFKGARTEFSAVY-----NGMQPGGVEVASI 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122 + GS TG +D A+ G +F + TR G F D LVS +G Sbjct: 57 SQNFDKNGSISGTGRPMDLAINGTGFFVTKDSTGQTQYTRAGVFNRDKDNFLVSNTGAKL 116 Query: 123 VLDMASVPIQI 133 + Sbjct: 117 QGYSVDGNNNL 127 Score = 72.6 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 28/227 (12%), Positives = 62/227 (27%), Gaps = 17/227 (7%) Query: 30 DTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAW 89 +T F + +V ++ N+ + F +G V + A+ ++ Sbjct: 174 NTNSFNSSYST--KVYDSLGNEHNVNQYFTKTGPNTWQVNVQVDGAATPSATIAMNFNSD 231 Query: 90 FALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFN-------- 141 +L++P V SG V Sbjct: 232 GSLQTPTAPYSVAFPAAGAQPMNIQVDLSGSTQFGAAFGVSTNSHNGYTSGELVGARVED 291 Query: 142 --VGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----V 194 + + ++ + L QG V+ + + + T + Sbjct: 292 SGRVYATYTNGQSQLQGQVVLADFANPQGLVKVNGTAWTQSFSSGAPIVGVPGTGTLGDL 351 Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 G LE SN + E+ ++ + + + I N+K + Sbjct: 352 SPGALEGSNVDLTSELVNLMTAQRNYQANAKTISTNDKLTQALFNAV 398 >gi|16760053|ref|NP_455670.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16764533|ref|NP_460148.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29142176|ref|NP_805518.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|62179694|ref|YP_216111.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|167553035|ref|ZP_02346785.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167994041|ref|ZP_02575133.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168264030|ref|ZP_02686003.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168467129|ref|ZP_02700971.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168822620|ref|ZP_02834620.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194442954|ref|YP_002040431.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|197250199|ref|YP_002146866.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197265088|ref|ZP_03165162.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|198245171|ref|YP_002215960.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|204930842|ref|ZP_03221715.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205353085|ref|YP_002226886.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207857315|ref|YP_002243966.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213161844|ref|ZP_03347554.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213424680|ref|ZP_03357445.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213582037|ref|ZP_03363863.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213648926|ref|ZP_03378979.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213865505|ref|ZP_03387624.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|224584319|ref|YP_002638117.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238911003|ref|ZP_04654840.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289806609|ref|ZP_06537238.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Typhi str. AG3] gi|289828580|ref|ZP_06546405.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|60392287|sp|P0A1J1|FLGE_SALTY RecName: Full=Flagellar hook protein flgE gi|60392288|sp|P0A1J2|FLGE_SALTI RecName: Full=Flagellar hook protein flgE gi|25511789|pir||AB0640 flagellar hook protein FlgE [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|47673|emb|CAA36022.1| flgE protein (AA 1-403) [Salmonella enterica subsp. enterica serovar Typhimurium] gi|16419694|gb|AAL20107.1| hook protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16502347|emb|CAD08301.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Typhi] gi|29137806|gb|AAO69367.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|62127327|gb|AAX65030.1| flagellar biosynthesis, hook protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|194401617|gb|ACF61839.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|195630413|gb|EDX49039.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197213902|gb|ACH51299.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197243343|gb|EDY25963.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197939687|gb|ACH77020.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|204320301|gb|EDZ05505.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205272866|emb|CAR37795.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205322416|gb|EDZ10255.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205328054|gb|EDZ14818.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205341012|gb|EDZ27776.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205347322|gb|EDZ33953.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206709118|emb|CAR33451.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224468846|gb|ACN46676.1| flagellar hook protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261246388|emb|CBG24197.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267992951|gb|ACY87836.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157718|emb|CBW17210.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312912164|dbj|BAJ36138.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320086383|emb|CBY96156.1| Flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321223795|gb|EFX48858.1| Flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322714164|gb|EFZ05735.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323129447|gb|ADX16877.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|326623708|gb|EGE30053.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326628165|gb|EGE34508.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] gi|332988068|gb|AEF07051.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 403 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 34/195 (17%), Positives = 71/195 (36%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SF+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 SFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ +LV+ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGMQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q+ K T + S V + + Sbjct: 117 TGYPATGTPPTIQQGANPAPITIPNTLMAAKSTTTASMQINLNSTDPVPSKTPFSVSDAD 176 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 177 SYNKKGTVTVYDSQG 191 Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 15/147 (10%), Positives = 45/147 (30%), Gaps = 5/147 (3%) Query: 98 IILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157 T F + + + + + + + +++ +V+ Sbjct: 255 TAATFSLSFLNSMQQNTGANNIVATNQNGYKPGDLVSYQINNDGTVVGNYSNEQEQVLGQ 314 Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQ 212 + L + ++G + ++ + + + G LE SN + E+ Sbjct: 315 IVLANFANNEGLASQGDNVWAATQASGVALLGTAGSGNFGKLTNGALEASNVDLSKELVN 374 Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIR 239 MI + + S I ++ + + Sbjct: 375 MIVAQRNYQSNAQTIKTQDQILNTLVN 401 >gi|56413836|ref|YP_150911.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197362759|ref|YP_002142396.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56128093|gb|AAV77599.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197094236|emb|CAR59741.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 403 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 34/195 (17%), Positives = 71/195 (36%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SF+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 SFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ +LV+ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGMQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q+ K T + S V + + Sbjct: 117 TGYPATGTPPTIQQGANPAPITIPNTLMAAKSTTTASMQINLNSTDPVPSKTPFSVSDAD 176 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 177 SYNKKGTVTVYDSQG 191 Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 15/147 (10%), Positives = 45/147 (30%), Gaps = 5/147 (3%) Query: 98 IILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157 T F + + + + + + + +++ +V+ Sbjct: 255 TAATFSLSFLNSMQQNTGANNIVATNQNGYKPGDLVSYQINNDGTVVGNYSNEQEQVLGQ 314 Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQ 212 + L + ++G + ++ + + + G LE SN + E+ Sbjct: 315 IVLANFANNEGLASQGDNVWAATQASGAALLGTAGSGNFGKLTNGALEASNVDLSKELVN 374 Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIR 239 MI + + S I ++ + + Sbjct: 375 MIVAQRNYQSNAQTIKTQDQILNTLVN 401 >gi|170694392|ref|ZP_02885546.1| protein of unknown function DUF1078 domain protein [Burkholderia graminis C4D1M] gi|170140815|gb|EDT08989.1| protein of unknown function DUF1078 domain protein [Burkholderia graminis C4D1M] Length = 502 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 68/177 (38%), Gaps = 2/177 (1%) Query: 19 LSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--IDQKISFVASGKEYLSKEVGSFIST 76 L + +N++N +TVGF++ +F+++ +Q + G+ ST Sbjct: 17 LDVIGNNIANANTVGFKSGAAQFADMYANSVATAVGNQIGIGTKLSEVQQQFSQGTITST 76 Query: 77 GTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQK 136 LD A+ G+ +F L + ++ +R+G F++ +G + +A G + A+ I Sbjct: 77 NQALDVAINGNGFFQLSNNGSLVYSRNGVFQLDKNGFITNAQGLQLMGYAANSTGVINTA 136 Query: 137 DEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT 193 + I+ K GL + + + T + +T Sbjct: 137 QTVPLSVPTANIAPKATTNIAAGLNLNAQDPLMLGTPSVTAATTNAGTLTTPGATIT 193 Score = 66.4 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 14/125 (11%), Positives = 35/125 (28%), Gaps = 5/125 (4%) Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 D + +Q+ + + L + G V N+ Sbjct: 377 NSLQPDGYAAGTLTSFTIGADGTLTGNYSNQQTAALGQIVLANFSNQNGLVNLGNNEFQQ 436 Query: 180 NIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 + + + ++ G +E+SN + E+ +I + + + I + Sbjct: 437 TSQSGVAQISAPGSTNHGVLQGGAVENSNVDLTSELVDLITAQRNYQANAQTIKTQQTVD 496 Query: 235 LEAIR 239 I Sbjct: 497 QTLIN 501 >gi|27380965|ref|NP_772494.1| hypothetical protein bll5854 [Bradyrhizobium japonicum USDA 110] gi|27354131|dbj|BAC51119.1| bll5854 [Bradyrhizobium japonicum USDA 110] Length = 754 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 28/172 (16%), Positives = 63/172 (36%), Gaps = 11/172 (6%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + N + A L ++ N++N+ T G++ I F +++ Q V + Sbjct: 6 AMNTSVGGLQAQSYALQNISGNIANSSTTGYKGIGTSFVDLIPDASVPSKQVAGGVTANA 65 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFAL-----------ESPRGIILTRDGRFKVTDDG 112 + G+ S+ + A+ GD +F++ + TR G F++ +G Sbjct: 66 KATITTQGTISSSSVATNMAITGDGFFSIQKATSVVDNLPQFGGVTYYTRRGDFQLNSNG 125 Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 +LV+ +G Y + PQ + + + + ++ Sbjct: 126 NLVNGAGYYLMGVTVDPKTGNPQGNVATVLKFQNNFIPAQATTSIQYAANLP 177 Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 14/88 (15%), Positives = 33/88 (37%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMI 214 +A + L + + + + P D + T+ LE SN + E ++I Sbjct: 667 LAQVSLSHFNGTNYLKALDGGAYAATEQSGPAIDGASGTISGSSLEGSNTDIADEFTKLI 726 Query: 215 HLTQKFNSITTLIDENEKSMLEAIRNIA 242 Q +++ T +I + + + + Sbjct: 727 VTQQAYSANTKVITTANSMVQDLLNVLR 754 >gi|238788315|ref|ZP_04632109.1| Flagellar hook protein FlgE [Yersinia frederiksenii ATCC 33641] gi|238723561|gb|EEQ15207.1| Flagellar hook protein FlgE [Yersinia frederiksenii ATCC 33641] Length = 428 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 33/192 (17%), Positives = 68/192 (35%), Gaps = 11/192 (5%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 F+ ++ A L + +N++N+ T GF+ V F+++ Q V Sbjct: 2 GFSQAVSGLNAASSNLDVIGNNIANSATSGFKAGSVSFADMFA-----GSQTGMGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVTDDGSLVSASGKYP 122 G+ +T LD A+ +F ++ G + R+G+FK+ ++ ++V+ G Sbjct: 57 ITQDFNDGTPTTTNRRLDLAISQSGFFRMQDSSGGVYFARNGQFKLDENRNIVNMQGLSL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ + +S +IA S +M + + P Sbjct: 117 TGYPATGTPP-----TVQQGANPVPLSIPQDMIAAKATESGNMVANLTSTHDVISATFDP 171 Query: 183 PTPLEDLSGVTV 194 P + Sbjct: 172 EKPDTYSFVNNM 183 Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 20/220 (9%), Positives = 54/220 (24%), Gaps = 7/220 (3%) Query: 27 SNTDT--VGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFAL 84 +N +T V + ++ S + + + + + G Sbjct: 207 ANGNTWAVYTKDSSATLADATKPFDPTDPAAASLRGTMVFDTNGALKTVANGGGAASATN 266 Query: 85 EGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE 144 T + + + + + Sbjct: 267 FNMTIPMGVVNGAPAQTFALNVAGSKQQNTGTDGIVTQNQTGYAAGEFTGFQINNDGSVV 326 Query: 145 KGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFL 199 +Q+ +++ + L + +G ++ T+ G L Sbjct: 327 GTYSNQQTQLLGQIVLVNFSNPEGLSPEGDNVWKETKSSGNPILGTAGGGGFGTLTSGAL 386 Query: 200 EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E SN + E+ MI + + S I ++ + + Sbjct: 387 ESSNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILQTLVN 426 >gi|330501137|ref|YP_004378006.1| flagellar basal body FlaE domain-containing protein [Pseudomonas mendocina NK-01] gi|328915423|gb|AEB56254.1| flagellar basal body FlaE domain-containing protein [Pseudomonas mendocina NK-01] Length = 395 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 31/132 (23%), Positives = 58/132 (43%), Gaps = 6/132 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SFNI + A+ ++L+T++ N++N T GF++ + +F + Q + Sbjct: 2 SFNIAMTGLSAVNEQLNTISHNIANAGTTGFKSSRTEFGSIYAD-----SQAMGVEVLAT 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122 + GS ++TG LD A+ G +F + TR G F D ++V+A+G+ Sbjct: 57 TQSISQGGSLVTTGRSLDLAISGGGFFVTRGGNGDVSYTRAGVFGADKDNNIVNAAGQTL 116 Query: 123 VLDMASVPIQIP 134 + Sbjct: 117 QGYPVDAAGNLQ 128 Score = 62.2 bits (149), Expect = 6e-08, Method: Composition-based stats. Identities = 9/99 (9%), Positives = 31/99 (31%), Gaps = 5/99 (5%) Query: 142 VGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP-----LEDLSGVTVKR 196 + + + + + L + + G + + Sbjct: 291 MVYANYSNGQRMLQGQVALATFANAGGLKDVSGTAWVETADSGAALIGVPGVGPFGALVA 350 Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 G LE+SN + ++ ++ + + + T ++ N++ Sbjct: 351 GSLENSNVDLTQQLVGLMEGQRNYQANTKVLTTNKELTQ 389 >gi|238799107|ref|ZP_04642563.1| Flagellar hook protein FlgE [Yersinia mollaretii ATCC 43969] gi|238717054|gb|EEQ08914.1| Flagellar hook protein FlgE [Yersinia mollaretii ATCC 43969] Length = 420 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 29/134 (21%), Positives = 56/134 (41%), Gaps = 6/134 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 F+ ++ A L + +N++N+ T GF+ V F+++ Q V Sbjct: 2 GFSQAVSGLNAASSNLDVIGNNIANSATSGFKAGSVSFADMFA-----GSQTGMGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +T LD A+ + +F ++ GI R+G+FK+ D ++V+ G Sbjct: 57 ITQDFNDGTATTTNRRLDLAISQNGFFRMQDSSGGIFYARNGQFKLDADRNIVNMQGLSL 116 Query: 123 VLDMASVPIQIPQK 136 A+ Q+ Sbjct: 117 TGYPATGTPPTIQQ 130 Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 12/98 (12%), Positives = 32/98 (32%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLED 201 + + +++ + + + +G ++ T+ G LE Sbjct: 321 YSNSQTQLLGQIVMANFANPEGLSSEGDNVWKETRASGNPMLGTAGGGGFGTLTSGALES 380 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ MI + + S I ++ + + Sbjct: 381 SNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILQTLVN 418 >gi|146311246|ref|YP_001176320.1| flagellar hook protein FlgE [Enterobacter sp. 638] gi|145318122|gb|ABP60269.1| flagellar basal body FlaE domain protein [Enterobacter sp. 638] Length = 404 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 31/192 (16%), Positives = 68/192 (35%), Gaps = 6/192 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKIGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F + ++ + +R+G+FK+ ++ ++V+ G Sbjct: 57 ITQDFNDGTTTNTGRGLDVAISQNGFFRMVDANGSVFYSRNGQFKLDENRNIVNMQGLQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + Q K T S + ++ Sbjct: 117 TGYPVAGTPPTIQTGANPQAITIPNTLMAAKSTTTASQQINLNSTDAAPSKAFNVADTSD 176 Query: 183 PTPLEDLSGVTV 194 P VTV Sbjct: 177 PDSYNKKGTVTV 188 Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 16/150 (10%), Positives = 46/150 (30%), Gaps = 5/150 (3%) Query: 95 PRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV 154 P T F + + + + + + + +++ +V Sbjct: 253 PGATPATFALSFANSMQQNTGANNIVATNQNGYKPGDLVSYQINDNGTVVGNYSNEQNQV 312 Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLEDSNANSMYE 209 + + L + ++G ++ + + ++ G LE SN + E Sbjct: 313 LGQIVLANFANNEGLKSEGDNVWTATQSSGVALLGTAGTGNFGSLTNGALEASNVDLSKE 372 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + MI + + S I ++ + + Sbjct: 373 LVNMIVAQRNYQSNAQTIKTQDQILNTLVN 402 >gi|90418365|ref|ZP_01226277.1| putative flagellar hook protein FlgE [Aurantimonas manganoxydans SI85-9A1] gi|90338037|gb|EAS51688.1| putative flagellar hook protein FlgE [Aurantimonas manganoxydans SI85-9A1] Length = 388 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 2/101 (1%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66 ++ A RLSTV++N++N+ T G++ +F+ +V A + + V + Sbjct: 9 TSVSGMNAQANRLSTVSENIANSSTNGYKRNSTEFASLVLA-QGGGEYNPGSVKTQVRQS 67 Query: 67 SKEVGSFISTGTELDFALEGDAWF-ALESPRGIILTRDGRF 106 + GS +T + D A++GD +F ++ TR G F Sbjct: 68 ISQQGSIAATSSGSDLAIQGDGFFVVQDTAGREFYTRAGSF 108 Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 17/210 (8%), Positives = 44/210 (20%), Gaps = 5/210 (2%) Query: 35 RTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES 94 + + + +G A+ + G +T D Sbjct: 176 KKSSMVVYDSIGKAIEVPVDMEKTAANTWTVSYTDSGGPQTTTIVFDPNTGRPTAAPANM 235 Query: 95 PRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV 154 + + + V + + + Sbjct: 236 TYTHVNGDTVDIEFGSLTEYATDFSSKLVTNGNPPGSFTGFAFAENGTLSGVMNTGQLIP 295 Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYE 209 + M L + S T + LE SN + E Sbjct: 296 LYEMSLARFASPDQLQASAGNVYSATASSGVAALGGPGTNGYGSLVSSGLEQSNVDLASE 355 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + MI + +++ + + + + + Sbjct: 356 LTSMIESQRSYSANSKVFQTGAEILDVLVN 385 >gi|212637785|ref|YP_002314310.1| flagellar hook protein FlgE [Shewanella piezotolerans WP3] gi|212559269|gb|ACJ31723.1| Flagellar basal body rod protein FlaE [Shewanella piezotolerans WP3] Length = 402 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 26/210 (12%), Positives = 57/210 (27%), Gaps = 10/210 (4%) Query: 42 SEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL- 100 + V + + + + D L G L I+ Sbjct: 193 EHALTQYYVKTADNTWSVHYMMDDVDVTPAAGHQLTFDSDGMLTGGDSLTLNINDPAIIG 252 Query: 101 ---TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI-A 156 T + S + ++ + G + + + Sbjct: 253 GASTLNLALGYDKSTQYASDYNNSSLNQNGYTSGELNGIRLDESGMLYGTYTNGQEQLQG 312 Query: 157 TMGLYSVDMSQGFVRRENSGI-SPNIPPTP----LEDLSGVTVKRGFLEDSNANSMYEMG 211 + L + G + N+ + N P + +V G+LE SN ++ EM Sbjct: 313 QVVLADFNNPNGLIPVSNNAWTATNAAGQPIVGTPTTGTLGSVASGYLEGSNVDTTAEMV 372 Query: 212 QMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 ++ + + S ++D N + I Sbjct: 373 SLMTAQRNYQSNAKVLDANSTMQQALLNAI 402 Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 60/144 (41%), Gaps = 6/144 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SFNI L+ A Q L+T+++N++N+ TVGFR+ + +FS + + Q Sbjct: 2 SFNIALSGLQATTQDLNTISNNIANSSTVGFRSGRSEFSAIY-----NGGQAGGVNVMST 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 GS + TG +LD ++GD +F + R G F DG + +G Sbjct: 57 SQNFSMGGSLVYTGRQLDMGIQGDGFFVLSSQDGNTMYARAGMFNQDADGFVTDPAGNRL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKG 146 S + + + G Sbjct: 117 QGYSVSGTGNLQTGNVTDLQVQAG 140 >gi|295097203|emb|CBK86293.1| fagellar hook-basal body proteins [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 404 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 28/157 (17%), Positives = 59/157 (37%), Gaps = 7/157 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SF+ GL+ A + L V +N++N+ T GF+ V F+++ V Sbjct: 2 SFSQGLSGLNAAAKALDVVGNNIANSQTAGFKAGSVAFADIFA------GTTGLGVQVAG 55 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 + G + + LD L+G +F + + R+G+FK +G++++++ Sbjct: 56 VTQNFGDGGLTAGNSSLDMGLQGKGFFRMVSEGGAVYYGRNGQFKQDQNGNIINSTNGLY 115 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG 159 + + + +T G Sbjct: 116 LTGYQATGTPPTIAPGAPVGPIRIPTEDMPPAASTAG 152 Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 24/141 (17%), Positives = 37/141 (26%), Gaps = 9/141 (6%) Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 SLV I E+ G+ +A + L Sbjct: 266 SSLTRRATDSLVKVDTIDGQAPGKYQSFVIGDSGEVVATYSNGQRQ----TVAQIVLADF 321 Query: 164 DMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 S G N+ S S T+ LE SN + EM MI + Sbjct: 322 ANSGGLAAEGNNVWSETPQSGQPFLGTSGSGSFGTINGNMLEQSNVDLGQEMVNMIVYQR 381 Query: 219 KFNSITTLIDENEKSMLEAIR 239 + S + I + + + Sbjct: 382 NYQSNSQTIKTQSELLQTLVN 402 >gi|224825777|ref|ZP_03698881.1| flagellar basal body FlaE domain protein [Lutiella nitroferrum 2002] gi|224602001|gb|EEG08180.1| flagellar basal body FlaE domain protein [Lutiella nitroferrum 2002] Length = 399 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 30/122 (24%), Positives = 53/122 (43%), Gaps = 6/122 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 S I L+ A+ +L ++++N++N+ T GF++ + FS Q + Sbjct: 2 SLEIALSGINAVNSQLGSISNNIANSGTYGFKSSRANFSATYA-----GTQATGVEVASN 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122 G ++TG LD A++G +F + TR G F DG LV + G++ Sbjct: 57 TQSIGRSGGTVTTGRALDAAIQGRGFFVTRDNAGSVAYTRVGIFNTDKDGVLVDSFGRHV 116 Query: 123 VL 124 Sbjct: 117 QG 118 Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats. Identities = 14/100 (14%), Positives = 36/100 (36%), Gaps = 5/100 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGI-----SPNIPPTPLEDLSGVTVKRGFLED 201 + + + + T+ L + G V + S + T+ G LE Sbjct: 300 YSNGQKQAVGTIALANFPNEDGLVPVSATSWVDSPASGTALLSAPGSGLAGTLSAGSLEQ 359 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 SN + E+ ++ + + + T +I + + ++ + Sbjct: 360 SNVDMTAELVNLMSAQRNYQANTKVISTEGQVIQALMQAV 399 >gi|170748125|ref|YP_001754385.1| flagellar hook protein FlgE [Methylobacterium radiotolerans JCM 2831] gi|170654647|gb|ACB23702.1| flagellar basal body FlaE domain protein [Methylobacterium radiotolerans JCM 2831] Length = 407 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 33/122 (27%), Positives = 56/122 (45%), Gaps = 3/122 (2%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 + G++ A RL TVADN+ N +T G++ +FS ++ S V + Sbjct: 7 LHAGVSGMNAQSNRLGTVADNIQNQNTTGYKRASTEFSSLLIDPSPGSYDAGS-VDTVVR 65 Query: 65 YLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVT-DDGSLVSASGKYP 122 + E G+ +T + D ++G+ +F ++ G TR G F V G LV+A+G Sbjct: 66 HRISEEGTGTATNSPTDLTIKGNGFFVVKDGSGRSYLTRAGNFVVDGQTGDLVNAAGMRL 125 Query: 123 VL 124 Sbjct: 126 QG 127 Score = 62.6 bits (150), Expect = 5e-08, Method: Composition-based stats. Identities = 22/212 (10%), Positives = 52/212 (24%), Gaps = 11/212 (5%) Query: 34 FRTIKVKFSEVVGAIKNDIDQKISF-VASGKEYLSKEVGSFISTGTELDFALEGDAWFAL 92 F+ N+ Q ++ + Y +G + + G Sbjct: 198 FKADL-----YFAKTANNTWQVTAYDASLPGNYPGTPLGGPTTLTFNAFGQIAGAPKLNF 252 Query: 93 ESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG 152 P G T D + K ++ + + Sbjct: 253 TVPNGQPFTLDLSPLSQVADVAQVSDIKARSVNGNAASAVEGADIDTDGTVYAIYRDGSR 312 Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSM 207 + + + SV R + N P + ++ LE+S + Sbjct: 313 RAAFRIPVASVGSPDNLTPRAGNVFDVNPESGPAQIGFANVGGRGHIQSKMLENSTVDLG 372 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E+ MI + + + + + + + Sbjct: 373 NELATMIEAQTTYGANSKVFQTGSEMLELLVN 404 >gi|327478809|gb|AEA82119.1| flagellar basal body FlaE domain-containing protein [Pseudomonas stutzeri DSM 4166] Length = 396 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 41/202 (20%), Positives = 71/202 (35%), Gaps = 11/202 (5%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SFNI L A+ ++L+T+ +N++N+ TVGF++ + F + Q + G Sbjct: 2 SFNIALTGLSAVNEQLNTIGNNIANSGTVGFKSSRTNFGSLYAET-----QAMGVEVIGT 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASGKYP 122 + G+ ST LD A+ G +F S + TR G F D + ++ G+ Sbjct: 57 TQSISQGGALTSTNRTLDLAISGGGFFVTRASNGDVGYTRAGIFGTDKDSYITNSLGQRL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQK-----GKVIATMGLYSVDMSQGFVRRENSGI 177 A + G I + V V + +S Sbjct: 117 QGYPADATGNLQTGTVGDLQLRSGGIPARATDALSFVANLDANQEVPTVAFDPQAADSYN 176 Query: 178 SPNIPPTPLEDLSGVTVKRGFL 199 S T+ + F+ Sbjct: 177 STYTTKLYDSQGKEHTLTQYFV 198 Score = 66.8 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 18/132 (13%), Positives = 46/132 (34%), Gaps = 9/132 (6%) Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174 V+ + + + + +++ GE +G+V+ L S ++G Sbjct: 269 VTNNRATGYAAGEQTGMSVEKDGKVYATYSNGERMLQGQVV----LASFVNAEGLKNISG 324 Query: 175 SGISPNIPPTPLEDLS-----GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 + + + T+ G LE SN + ++ ++ + + + T +I Sbjct: 325 TAWTETAASGAAMLGAPGVGQYGTLASGALESSNVDLTQQLVGLMEGQRNYQANTQVIST 384 Query: 230 NEKSMLEAIRNI 241 N++ I Sbjct: 385 NKELTQVLFNAI 396 >gi|157146226|ref|YP_001453545.1| flagellar hook protein FlgE [Citrobacter koseri ATCC BAA-895] gi|157083431|gb|ABV13109.1| hypothetical protein CKO_01983 [Citrobacter koseri ATCC BAA-895] Length = 401 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 32/195 (16%), Positives = 71/195 (36%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ +LV+ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q+ K T + S + + + Sbjct: 117 TGYPATGTPPTIQQGANPGPITIPNTLMAAKATTTASMQINLNSSDELPSKTPFDPSDAD 176 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 177 SYNKKGTVTVFDSQG 191 Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 13/122 (10%), Positives = 39/122 (31%), Gaps = 5/122 (4%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + + + +++ +V+ + L + ++G + ++ + Sbjct: 278 NQNGYKPGDLVSYQINDDGTVVGNYSNEQTQVLGQIVLANFANNEGLASQGDNVWAATQA 337 Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + + G LE SN + E+ MI + + S I ++ + Sbjct: 338 SGVALLGTAGTGNFGKLTNGALESSNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397 Query: 238 IR 239 + Sbjct: 398 VN 399 >gi|89056664|ref|YP_512115.1| hypothetical protein Jann_4173 [Jannaschia sp. CCS1] gi|88866213|gb|ABD57090.1| flagellar hook protein FlgE putative [Jannaschia sp. CCS1] Length = 452 Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 17/123 (13%), Positives = 41/123 (33%), Gaps = 5/123 (4%) Query: 125 DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP- 183 D + V + + + + + + + L + G + +N + + Sbjct: 330 DGSPVGNLVSVEVDPNGFVKANFDVGITRTVYQIPLIDLPNPNGLIAEDNQLYTTSAESG 389 Query: 184 ----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 D V LE+S + E+ Q+I + ++S +I ++ + E Sbjct: 390 SFFLWDAGDGPTGDVVAFALEESTTDVAAELTQLIQTQRAYSSNAKIIQTVDEMLQETTN 449 Query: 240 NIA 242 I Sbjct: 450 IIR 452 Score = 73.0 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 34/146 (23%), Positives = 56/146 (38%), Gaps = 11/146 (7%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 +S N G+A RL+T+ADN++N+ T G++ FS +V V Sbjct: 18 SSLNAGVAGLSVNASRLATIADNIANSGTNGYKRATADFSSMVIDQGGGTYSAG-GVRVT 76 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALES----------PRGIILTRDGRFKVTDDG 112 L + G+ +T D A+ G + + + L G F+ DG Sbjct: 77 TGRLIDQSGALATTNNGTDLAVRGRGFLPVTRSSAVNAAAGAELPLYLATTGSFRTDADG 136 Query: 113 SLVSASGKYPVLDMASVPIQIPQKDE 138 LV++SG + A +P Sbjct: 137 YLVTSSGVTLMGWPADADGNVPSFPR 162 >gi|120597305|ref|YP_961879.1| flagellar hook protein FlgE [Shewanella sp. W3-18-1] gi|120557398|gb|ABM23325.1| flagellar basal body FlaE domain protein [Shewanella sp. W3-18-1] Length = 395 Score = 74.1 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 34/133 (25%), Positives = 58/133 (43%), Gaps = 6/133 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SFNI L+ A Q L+T+++N++N T GFR + +F+ + + Q Sbjct: 2 SFNIALSGLQATTQDLNTISNNIANASTNGFRGGRSEFASIY-----NGGQAGGVSVMST 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASGKYP 122 + GS TG +LD ++G+ +F L+ + G + R G F G + G Sbjct: 57 TQNFSKGGSLTYTGRQLDMGIQGEGFFVLKGTDGGAMYARAGMFHKDSQGFITDPVGSRL 116 Query: 123 VLDMASVPIQIPQ 135 + +I Q Sbjct: 117 QGYSVNATGKIQQ 129 Score = 65.3 bits (157), Expect = 7e-09, Method: Composition-based stats. Identities = 17/142 (11%), Positives = 38/142 (26%), Gaps = 6/142 (4%) Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI-ATMGLYSVD 164 + + ++ N G + + + + L + Sbjct: 254 INFDKSTQYAAKYNNSSLSQDGYTSGELKGVRLDDNGMLYGTYTNGQEQLQGQVILANFS 313 Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVTVKRG-----FLEDSNANSMYEMGQMIHLTQK 219 G N+ + T G +LE SN ++ EM ++ + Sbjct: 314 NPNGLSAVSNNAWVATNTAGQAITGAPSTGTMGTVTGGYLEGSNVDTTAEMVNLMSAQRN 373 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + S ++D N + I Sbjct: 374 YQSNAKVLDVNSTMQQALLNAI 395 >gi|146294550|ref|YP_001184974.1| flagellar hook protein FlgE [Shewanella putrefaciens CN-32] gi|145566240|gb|ABP77175.1| flagellar basal body FlaE domain protein [Shewanella putrefaciens CN-32] Length = 395 Score = 74.1 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 34/133 (25%), Positives = 58/133 (43%), Gaps = 6/133 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SFNI L+ A Q L+T+++N++N T GFR + +F+ + + Q Sbjct: 2 SFNIALSGLQATTQDLNTISNNIANASTNGFRGGRSEFASIY-----NGGQAGGVSVMST 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASGKYP 122 + GS TG +LD ++G+ +F L+ + G + R G F G + G Sbjct: 57 TQNFSKGGSLTYTGRQLDMGIQGEGFFVLKGTDGGAMYARAGMFHKDSQGFITDPVGSRL 116 Query: 123 VLDMASVPIQIPQ 135 + +I Q Sbjct: 117 QGYSVNATGKIQQ 129 Score = 65.3 bits (157), Expect = 7e-09, Method: Composition-based stats. Identities = 17/142 (11%), Positives = 38/142 (26%), Gaps = 6/142 (4%) Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI-ATMGLYSVD 164 + + ++ N G + + + + L + Sbjct: 254 INFDKSTQYAAKYNNSSLSQDGYTSGELKGVRLDDNGMLYGTYTNGQEQLQGQVILANFS 313 Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVTVKRG-----FLEDSNANSMYEMGQMIHLTQK 219 G N+ + T G +LE SN ++ EM ++ + Sbjct: 314 NPNGLSAVSNNAWVATNTAGQAITGAPSTGTMGTVTGGYLEGSNVDTTAEMVNLMSAQRN 373 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 + S ++D N + I Sbjct: 374 YQSNAKVLDVNSTMQQALLNAI 395 >gi|312164118|gb|ADQ38281.1| flagellar hook protein [Azospirillum brasilense] Length = 291 Score = 74.1 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 31/135 (22%), Positives = 59/135 (43%), Gaps = 16/135 (11%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 FN G+ A + L T+++N++N T GF+ + +FS+ V + + + V + + Sbjct: 7 FNNGVLGLTAQNRALGTISNNIANASTSGFKASETQFSDFVLSDRTGNKDPGNGVRAFE- 65 Query: 65 YLSKEVGSFISTGTELDFALEGDAWFALES---------------PRGIILTRDGRFKVT 109 L G+ T + A+ G+ +F ++ + LTR G F Sbjct: 66 RLDHSGGTVTRTDITTNAAINGNGFFIVQDLAAQAGTTATTAQTSDDSVFLTRSGDFSPD 125 Query: 110 DDGSLVSASGKYPVL 124 +G LV+ +GK + Sbjct: 126 KEGRLVNGAGKALMG 140 >gi|293408367|ref|ZP_06652206.1| conserved hypothetical protein [Escherichia coli B354] gi|291471545|gb|EFF14028.1| conserved hypothetical protein [Escherichia coli B354] Length = 400 Score = 74.1 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 40/187 (21%), Positives = 68/187 (36%), Gaps = 6/187 (3%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66 I A+ ++L +++N++N TVG++++ +FS + Q + +G Sbjct: 5 IAATGLNAVNEQLDGISNNIANAGTVGYKSMTTQFSAMYA-----GSQAMGVSVAGTAQS 59 Query: 67 SKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125 GS +STG LD A+ D +F +S I TR G F+ +G +V+ASG Y Sbjct: 60 ISRGGSLVSTGNALDLAINNDGFFVTCDSAGNISYTRAGSFETDKNGYIVNASGAYLQGY 119 Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185 + + G I + T R N Sbjct: 120 PVDDSGTLQTGTVTDIQIKTGNIPAQASSSLTFTANFDASDDAIDRTTVPFDPTNSSSYT 179 Query: 186 LEDLSGV 192 + V Sbjct: 180 DSYTTTV 186 Score = 68.7 bits (166), Expect = 6e-10, Method: Composition-based stats. Identities = 25/194 (12%), Positives = 55/194 (28%), Gaps = 10/194 (5%) Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113 Q + + +TG F ++ I LT D Sbjct: 211 QYTFDGQQQTGVPATTLTFDPNTGKLTSPTTPQTIEFQTDAAAPIDLTVDYSTCTQYGSD 270 Query: 114 L-VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172 V+ + +Q+ +++ GE +G+V+ L + G Sbjct: 271 FSVTTNSANGYASATQNGVQVDDDGKVYATYSNGERMLQGQVV----LATFPNENGLEAV 326 Query: 173 ENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 + T+ G LE SN + E+ ++ + + + T +I Sbjct: 327 SGTAWVQTGESGTPLIGVPGSGTCGTLTSGVLESSNVDITSELVNLMTAQRNYQANTKVI 386 Query: 228 DENEKSMLEAIRNI 241 + + + + Sbjct: 387 ATSTQLDDALFQAM 400 >gi|89072315|ref|ZP_01158894.1| flagellar hook protein [Photobacterium sp. SKA34] gi|89051847|gb|EAR57299.1| flagellar hook protein [Photobacterium sp. SKA34] Length = 398 Score = 74.1 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 33/132 (25%), Positives = 56/132 (42%), Gaps = 6/132 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SF+I L+ A +L+T+++N++N T GF+ + +FS V + Q + Sbjct: 2 SFDIALSGLDATNIQLNTISNNIANVSTSGFKESRTEFSAVY-----NGMQAGGVEVAAI 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASGKYP 122 + GS TG LD A+ G +F + + TR G F D ++VS +G Sbjct: 57 SQNFDKTGSITGTGRPLDLAISGSGFFVTKDLTGQTLYTRSGVFGSDKDNNIVSNNGAKL 116 Query: 123 VLDMASVPIQIP 134 + Sbjct: 117 QGYTVDANNNLQ 128 Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 13/100 (13%), Positives = 34/100 (34%), Gaps = 5/100 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLED 201 + + ++ + L QG V+ + + + + T + G LE Sbjct: 299 YTNGQSQLQGQVMLADFANPQGLVKTNGTSWIQSFSSGAPVNGAPSTGTLGGLVAGALEG 358 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 SN + E+ ++ + + + I ++K + Sbjct: 359 SNVDLTSELVSLMTAQRNYQANAKTISTSDKLTQSLFNAV 398 >gi|157781876|gb|ABV72264.1| FlgE [Azospirillum brasilense] Length = 297 Score = 74.1 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 31/135 (22%), Positives = 59/135 (43%), Gaps = 16/135 (11%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 FN G+ A + L T+++N++N T GF+ + +FS+ V + + + V + + Sbjct: 7 FNNGVLGLTAQNRALGTISNNIANASTSGFKASETQFSDFVLSDRTGNKDPGNGVRAFE- 65 Query: 65 YLSKEVGSFISTGTELDFALEGDAWFALES---------------PRGIILTRDGRFKVT 109 L G+ T + A+ G+ +F ++ + LTR G F Sbjct: 66 RLDHSGGTVTRTDITTNAAINGNGFFIVQDLAAQAGTTATTAQTSDDSVFLTRSGDFSPD 125 Query: 110 DDGSLVSASGKYPVL 124 +G LV+ +GK + Sbjct: 126 KEGRLVNGAGKALMG 140 >gi|296445196|ref|ZP_06887156.1| fagellar hook-basal body protein [Methylosinus trichosporium OB3b] gi|296257370|gb|EFH04437.1| fagellar hook-basal body protein [Methylosinus trichosporium OB3b] Length = 413 Score = 74.1 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 2/121 (1%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 FN + A L V+ N++N+ TVG++ +FS V+ +++N D V + Sbjct: 7 FNTSVMGMAAQASALGAVSQNIANSGTVGYKDATTQFSTVLSSVQNGSDPAG-GVTAQTG 65 Query: 65 YLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYPV 123 G+ T + D A++G +F + +LTR G F+ +G LV+ +G Y + Sbjct: 66 VAVTAQGNTQQTSSTTDLAIQGSGFFVVSDSSGNTLLTRAGSFEPDSEGRLVNKAGYYLM 125 Query: 124 L 124 Sbjct: 126 G 126 Score = 59.1 bits (141), Expect = 5e-07, Method: Composition-based stats. Identities = 11/85 (12%), Positives = 28/85 (32%), Gaps = 6/85 (7%) Query: 162 SVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHL 216 +V G + + N T ++ LE S + ++ MI Sbjct: 329 NVSSPSGLQSVSGNAFATNASSGTAYVGLPGTGSFGDIQSKSLESSTVDLATQLSNMIVA 388 Query: 217 TQKFNSITTLIDENEKSMLEAIRNI 241 + + + + + + M + + N+ Sbjct: 389 QRSYTANSQVFQVASEVM-QVLNNL 412 >gi|218703525|ref|YP_002411044.1| lateral flagellar hook FlgE-like protein [Escherichia coli UMN026] gi|293403355|ref|ZP_06647446.1| flgE [Escherichia coli FVEC1412] gi|300900359|ref|ZP_07118535.1| flagellar hook protein FlgE [Escherichia coli MS 198-1] gi|218430622|emb|CAR11488.1| Lateral flagellar hook protein (FlgE-like) [Escherichia coli UMN026] gi|291429208|gb|EFF02228.1| flgE [Escherichia coli FVEC1412] gi|300356127|gb|EFJ71997.1| flagellar hook protein FlgE [Escherichia coli MS 198-1] Length = 400 Score = 74.1 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 40/187 (21%), Positives = 68/187 (36%), Gaps = 6/187 (3%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66 I A+ ++L +++N++N TVG++++ +FS + Q + +G Sbjct: 5 IAATGLNAVNEQLDGISNNIANAGTVGYKSMTTQFSAMYA-----GSQAMGVSVAGTAQS 59 Query: 67 SKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125 GS +STG LD A+ D +F +S I TR G F+ +G +V+ASG Y Sbjct: 60 ISRGGSLVSTGNALDLAINNDGFFVTCDSAGNISYTRAGSFETDKNGYIVNASGAYLQGY 119 Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185 + + G I + T R N Sbjct: 120 PVDDTGTLQTGTVTDIQIKTGNIPAQASSSLTFTANFDASDDAIDRTTVPFDPTNSSSYT 179 Query: 186 LEDLSGV 192 + V Sbjct: 180 DSYTTTV 186 Score = 68.4 bits (165), Expect = 8e-10, Method: Composition-based stats. Identities = 25/194 (12%), Positives = 55/194 (28%), Gaps = 10/194 (5%) Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113 Q + + +TG F ++ I LT D Sbjct: 211 QYTFDGQQQTGVPATTLTFDPNTGKLTSLTTPQTIEFQTDAAAPIDLTVDYSTCTQYGSD 270 Query: 114 L-VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172 V+ + +Q+ +++ GE +G+V+ L + G Sbjct: 271 FSVTTNSANGYASATQNGVQVDDDGKVYATYSNGERMLQGQVV----LATFPNENGLEAV 326 Query: 173 ENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 + T+ G LE SN + E+ ++ + + + T +I Sbjct: 327 SGTAWVQTGESGTPLIGVPGSGTCGTLTSGVLESSNVDITSELVNLMTAQRNYQANTKVI 386 Query: 228 DENEKSMLEAIRNI 241 + + + + Sbjct: 387 ATSTQLDDALFQAM 400 >gi|260767923|ref|ZP_05876857.1| flagellar hook protein FlgE [Vibrio furnissii CIP 102972] gi|260615953|gb|EEX41138.1| flagellar hook protein FlgE [Vibrio furnissii CIP 102972] Length = 398 Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 6/131 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SFNI L+ A L+T++ N++N T GF+ + +FS V + Q + Sbjct: 2 SFNIALSGLDATNTELNTISHNIANASTYGFKGARTEFSAVY-----NGMQPGGVEVASI 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122 + GS TG +D A+ G +F + + TR G F D +V +G Sbjct: 57 SQNFDKNGSVTGTGRAMDLAINGSGFFVTKDSMGQTLYTRSGVFGTDKDNYVVGNTGAKL 116 Query: 123 VLDMASVPIQI 133 + Sbjct: 117 QGYSVDGSNNL 127 Score = 71.8 bits (174), Expect = 9e-11, Method: Composition-based stats. Identities = 19/134 (14%), Positives = 42/134 (31%), Gaps = 9/134 (6%) Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172 VS + +++ ++ GE +G+V+ L + QG + Sbjct: 269 FGVSTNNPNGYTSGELAGVRVEGNGMVYATYTNGESQLQGQVV----LANFANPQGLAKV 324 Query: 173 ENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 + + + T + G LE SN + E+ ++ + + + I Sbjct: 325 SGTAWTQSFSSGSPTVGVPGTGTLGDLTPGALEGSNVDLTSELVSLMTAQRNYQANAKTI 384 Query: 228 DENEKSMLEAIRNI 241 +K I Sbjct: 385 STEDKLTQALFNAI 398 >gi|315179626|gb|ADT86540.1| flagellar hook protein E [Vibrio furnissii NCTC 11218] Length = 398 Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 6/131 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SFNI L+ A L+T++ N++N T GF+ + +FS V + Q + Sbjct: 2 SFNIALSGLDATNTELNTISHNIANASTYGFKGARTEFSAVY-----NGMQPGGVEVASI 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122 + GS TG +D A+ G +F + + TR G F D +V +G Sbjct: 57 SQNFDKNGSVTGTGRAMDLAINGSGFFVTKDSMGQTLYTRSGVFGTDKDNYVVGNTGAKL 116 Query: 123 VLDMASVPIQI 133 + Sbjct: 117 QGYSVDGNNNL 127 Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 19/134 (14%), Positives = 42/134 (31%), Gaps = 9/134 (6%) Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172 VS + +++ ++ GE +G+V+ L + QG + Sbjct: 269 FGVSTNNPNGYTSGELAGVRVEGNGMVYATYTNGESQLQGQVV----LANFANPQGLAKV 324 Query: 173 ENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 + + + T + G LE SN + E+ ++ + + + I Sbjct: 325 SGTAWTQSFSSGSPTVGVPGTGTLGDLTPGALEGSNVDLTSELVSLMTAQRNYQANAKTI 384 Query: 228 DENEKSMLEAIRNI 241 +K I Sbjct: 385 STEDKLTQALFNAI 398 >gi|161614600|ref|YP_001588565.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|168237259|ref|ZP_02662317.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168244776|ref|ZP_02669708.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194449419|ref|YP_002045176.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194736988|ref|YP_002114176.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|161363964|gb|ABX67732.1| hypothetical protein SPAB_02350 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194407723|gb|ACF67942.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194712490|gb|ACF91711.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197289882|gb|EDY29243.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|205336442|gb|EDZ23206.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 403 Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 34/195 (17%), Positives = 71/195 (36%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SF+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 SFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ +LV+ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGMQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q+ K T + S V + + Sbjct: 117 TGYPATGTPPTIQQGANPAPITIPNTLMAAKSTTTASMQINLNSTDPVPSKTPFSVSDAD 176 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 177 SYNKKGTVTVYDSQG 191 Score = 73.4 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 15/147 (10%), Positives = 45/147 (30%), Gaps = 5/147 (3%) Query: 98 IILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157 T F + + + + + + + +++ +V+ Sbjct: 255 TAATFSLSFLNSMQQNTGANNIVATNQNGYKPGDLVSYQINNDGTVVGNYSNEQEQVLGQ 314 Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQ 212 + L + ++G + ++ + + + G LE SN + E+ Sbjct: 315 IVLANFANNEGLASQGDNVWAATQASGVALLGTAGSGNFGKLTNGALEASNVDLSKELVN 374 Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIR 239 MI + + S I ++ + + Sbjct: 375 MIVAQRNYQSNAQTIKTQDQILNTLVN 401 >gi|289679022|ref|ZP_06499912.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv. syringae FF5] Length = 151 Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 28/147 (19%), Positives = 53/147 (36%), Gaps = 3/147 (2%) Query: 98 IILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157 TR + G L SG + + + + Q+ EI G S Sbjct: 2 EAYTRSSGMNIDALGVLRDGSGLPVMGNGGPIAVPPQQQIEIGADGTISIRSLGESPQVM 61 Query: 158 MGLYS---VDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMI 214 + V + + G+ P + + V V+ GFL+ SN N++ EM ++ Sbjct: 62 AQVDRIKLVRPDLKTMEKGPDGLIHTKTGRPADADATVQVESGFLQASNVNAVEEMTSVL 121 Query: 215 HLTQKFNSITTLIDENEKSMLEAIRNI 241 L+++F ++ E+ R + Sbjct: 122 ALSRQFELHVKMMKTAEEDDQSMARVL 148 >gi|167945456|ref|ZP_02532530.1| flagellar hook protein FlgE [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 175 Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 27/114 (23%), Positives = 48/114 (42%), Gaps = 3/114 (2%) Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID--QKISFVASGKEYLSKEVGSFI 74 L +N++N+ T GF+ + +F+++ + +D V + K S Sbjct: 3 TDLEVTGNNIANSSTTGFKESRAEFADIFASSISDASNATSGQGVRTTKVAQQFRQDSIE 62 Query: 75 STGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLVSASGKYPVLDMA 127 T LD + G+ +F +E P G TR G F V +G +V +G + Sbjct: 63 FTANNLDLGINGEGFFTMEQPNGDRSYTRAGAFNVDRNGYVVDHTGSRLQIFPP 116 >gi|195940721|ref|ZP_03086103.1| flagellar basal body rod protein FlgF [Escherichia coli O157:H7 str. EC4024] Length = 186 Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 39/186 (20%), Positives = 65/186 (34%), Gaps = 13/186 (6%) Query: 68 KEVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASGKYPVLDM 126 G T LD AL+ D W A+++ G TR+G +V+ G L +PV+ Sbjct: 1 MTPGQMDYTARPLDVALQQDGWLAVQTADGGEGYTRNGNIQVSATGQL--TIQGHPVMGE 58 Query: 127 ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL----YSVDMSQGFVRRENSGISP--- 179 A + G T+ V V+R + G+ Sbjct: 59 AGPLTVPEGSELTIAADGTISALNPGDPANTVAPVGRLKLVKAEGNEVQRGDDGMFRLTQ 118 Query: 180 ---NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 L+ + V G LE SN + M MI ++F +I +++ + Sbjct: 119 AAQATRGATLQADPTIRVMSGVLEGSNVKPVEAMTDMIASARRFEMQMKIISSVDENASK 178 Query: 237 AIRNIA 242 A + +A Sbjct: 179 ANQLLA 184 >gi|1294806|gb|AAB06803.1| hook protein [Treponema denticola] Length = 184 Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 23/115 (20%), Positives = 46/115 (40%), Gaps = 12/115 (10%) Query: 25 NMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK------------ISFVASGKEYLSKEVGS 72 N++N +T GF+ +V F +++ + + + G+ Sbjct: 1 NVANVNTTGFKRGRVNFQDLISQQLSGAARPTEELGGVNPKEVGLGMMVASIDTIFTQGA 60 Query: 73 FISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMA 127 +TG D A++G+ +F L+ TR G F + +G+LV+ + V Sbjct: 61 LQTTGVNTDLAIQGNGFFILKDGEKTFYTRAGAFGIDKEGTLVNPANGMRVQGWM 115 >gi|289679025|ref|ZP_06499915.1| flagellar hook protein FlgE [Pseudomonas syringae pv. syringae FF5] Length = 137 Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 21/129 (16%), Positives = 40/129 (31%), Gaps = 5/129 (3%) Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 ++S +D S + + G + K I + L S G R ++ Sbjct: 7 TSSRSAAYVDGHSAGELKSLEVGRDGILRAGFTNGMTKSIGQVMLASFANPHGLQPRSDT 66 Query: 176 GISPNIPPTPLED-----LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + E + ++ G LE SN E+ +I + + + I Sbjct: 67 RWTATADSGVAEYDVPGVGTLGSIVSGALEGSNVVLADELIALIQAQTAYQANSKAISTE 126 Query: 231 EKSMLEAIR 239 M I+ Sbjct: 127 VTLMQTLIQ 135 >gi|146278769|ref|YP_001168928.1| hypothetical protein Rsph17025_2736 [Rhodobacter sphaeroides ATCC 17025] gi|145557010|gb|ABP71623.1| protein of unknown function DUF1078 domain protein [Rhodobacter sphaeroides ATCC 17025] Length = 474 Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 35/170 (20%), Positives = 66/170 (38%), Gaps = 10/170 (5%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV-GAIKNDIDQKISFVAS 61 +S N G+A A +L+++ADN++N+ T G++ F +V N V + Sbjct: 5 SSLNAGVAGLYANATKLASIADNIANSGTYGYKRADADFESMVITQSANSGTYSAGGVRA 64 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG---------IILTRDGRFKVTDDG 112 L +E G+ +ST +D A+ G + +++TR G FK +G Sbjct: 65 NTLRLVEERGAIVSTSNAMDIAISGRGMLPVVRETSLGSTTGNDALLMTRTGSFKTDPNG 124 Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162 L + +G + A+ +P + + + A Sbjct: 125 VLKTDTGLVLLGWPANADGTVPTMSRDSISQLQPVVIAANQTAADPTTRM 174 Score = 69.1 bits (167), Expect = 4e-10, Method: Composition-based stats. Identities = 15/98 (15%), Positives = 30/98 (30%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLED 201 + +VI + L V G N + + D V E Sbjct: 374 YDTGFTRVIYQIPLVDVPNYNGLTALNNQTFAISPDSGSFYLWDAGDGPTGDVVGYAREG 433 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S + E+ +I + ++S +I ++ + E Sbjct: 434 STTDVAQELTNLIQTQRAYSSNAKIIQTVDEMLQETTN 471 >gi|59889780|emb|CAH19136.1| Lateral flagellar hook protein (FlgE-like) [Escherichia coli] gi|284920044|emb|CBG33101.1| lateral flagellar hook protein (FlgE-like) [Escherichia coli 042] Length = 400 Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 36/146 (24%), Positives = 63/146 (43%), Gaps = 6/146 (4%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66 I A+ ++L +++N++N TVG++++ +FS + Q + +G Sbjct: 5 IAATGLNAVNEQLDGISNNIANAGTVGYKSMTTQFSAMYA-----GSQAMGVSVAGTAQS 59 Query: 67 SKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125 GS +STG LD A+ D +F +S I TR G F+ +G +V+ASG Y Sbjct: 60 ISRGGSLVSTGNALDLAINNDGFFVTCDSAGNISYTRAGSFETDKNGYIVNASGAYLQGY 119 Query: 126 MASVPIQIPQKDEIFNVGEKGEISQK 151 + + G I + Sbjct: 120 PVDDSGTLQTGTVTDIQIKTGNIPAQ 145 Score = 68.7 bits (166), Expect = 6e-10, Method: Composition-based stats. Identities = 25/194 (12%), Positives = 55/194 (28%), Gaps = 10/194 (5%) Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113 Q + + +TG F ++ I LT D Sbjct: 211 QYTFDGQQQTGVPAMTLTFDPNTGKLTSPTTPQTIEFQTDAAAPIDLTVDYSTCTQYGSE 270 Query: 114 L-VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172 V+ + +Q+ +++ GE +G+V+ L + G Sbjct: 271 FSVTTNAANGYASATQNGVQVDDDGKVYATYSNGERMLQGQVV----LATFPNENGLEAV 326 Query: 173 ENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 + T+ G LE SN + E+ ++ + + + T +I Sbjct: 327 SGTAWVQTGESGTPLIGVPGSGTCGTLSSGVLESSNVDITSELVNLMTAQRNYQANTKVI 386 Query: 228 DENEKSMLEAIRNI 241 + + + + Sbjct: 387 ATSTQLDDALFQAM 400 >gi|262166282|ref|ZP_06034019.1| flagellar hook protein FlgE [Vibrio mimicus VM223] gi|262025998|gb|EEY44666.1| flagellar hook protein FlgE [Vibrio mimicus VM223] Length = 421 Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 31/196 (15%), Positives = 67/196 (34%), Gaps = 13/196 (6%) Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGKEYLSKEVGSFI 74 L+T ++N++N +T GF+ + +F +V N V + K GS I Sbjct: 1 MDLNTTSNNIANANTFGFKESRAEFGDVYSTSLFTNAKTTPGQGVQAAKVAQQFHEGSSI 60 Query: 75 STGTELDFALEGDAWFALES----PRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVP 130 T LD + G +FA+ P+ LTR+G F + + +V+A+ ++ + + Sbjct: 61 YTNNPLDLRIAGTGFFAVAKDKIVPQQNELTRNGAFHLDKNSYMVTANDEFLLGYEVNPD 120 Query: 131 IQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF-------VRRENSGISPNIPP 183 E + + + + ++ + + + Sbjct: 121 SGDVLSYEPKPINIPPQFGKPKQTANIDLGANLPANGELKDPTLFDITDPETYNRTTSST 180 Query: 184 TPLEDLSGVTVKRGFL 199 + +L Sbjct: 181 IYDSMGQPYKLTTYYL 196 Score = 65.7 bits (158), Expect = 5e-09, Method: Composition-based stats. Identities = 15/122 (12%), Positives = 37/122 (30%), Gaps = 5/122 (4%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI- 181 D A+ + + + + + L V QG ++ + Sbjct: 298 DQDGATTGFLTKIDFDENGSVLATYSNGQNTTLGRVALVRVANEQGLDKKGGTQWDATQF 357 Query: 182 ----PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 S ++ G LE SN + E+ +I + F + + ++ + Sbjct: 358 SGDKIWGESNKGSFGSISNGSLEQSNIDMTQELVDLISAQRNFQANSRALEVHNGLQQNI 417 Query: 238 IR 239 ++ Sbjct: 418 LQ 419 >gi|22126389|ref|NP_669812.1| flagellar basal body rod protein FlgF [Yersinia pestis KIM 10] gi|45441408|ref|NP_992947.1| flagellar basal body rod protein FlgF [Yersinia pestis biovar Microtus str. 91001] gi|108807174|ref|YP_651090.1| flagellar basal body rod protein FlgF [Yersinia pestis Antiqua] gi|108812482|ref|YP_648249.1| flagellar basal body rod protein FlgF [Yersinia pestis Nepal516] gi|145598609|ref|YP_001162685.1| flagellar basal body rod protein FlgF [Yersinia pestis Pestoides F] gi|149366250|ref|ZP_01888285.1| flagellar basal-body rod protein FlgF [Yersinia pestis CA88-4125] gi|162420290|ref|YP_001606474.1| flagellar basal body rod protein FlgF [Yersinia pestis Angola] gi|165926032|ref|ZP_02221864.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar Orientalis str. F1991016] gi|165938686|ref|ZP_02227241.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar Orientalis str. IP275] gi|166010809|ref|ZP_02231707.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar Antiqua str. E1979001] gi|166211025|ref|ZP_02237060.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar Antiqua str. B42003004] gi|167401087|ref|ZP_02306590.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167420459|ref|ZP_02312212.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425815|ref|ZP_02317568.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167467492|ref|ZP_02332196.1| flagellar basal-body rod protein FlgF [Yersinia pestis FV-1] gi|218928923|ref|YP_002346798.1| flagellar basal body rod protein FlgF [Yersinia pestis CO92] gi|229896243|ref|ZP_04511413.1| Flagellar basal-body rod protein flgF [Yersinia pestis Pestoides A] gi|229897178|ref|ZP_04512334.1| Flagellar basal-body rod protein flgF [Yersinia pestis biovar Orientalis str. PEXU2] gi|229897904|ref|ZP_04513055.1| Flagellar basal-body rod protein flgF [Yersinia pestis biovar Orientalis str. India 195] gi|229902864|ref|ZP_04517981.1| Flagellar basal-body rod protein flgF [Yersinia pestis Nepal516] gi|270486644|ref|ZP_06203718.1| flagellar basal body rod protein FlgF [Yersinia pestis KIM D27] gi|294504029|ref|YP_003568091.1| flagellar basal-body rod protein FlgF [Yersinia pestis Z176003] gi|21959375|gb|AAM86063.1|AE013853_11 cell-proximal portion of basal-body rod protein [Yersinia pestis KIM 10] gi|45436268|gb|AAS61824.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar Microtus str. 91001] gi|108776130|gb|ABG18649.1| flagellar basal-body rod protein FlgF [Yersinia pestis Nepal516] gi|108779087|gb|ABG13145.1| flagellar basal-body rod protein FlgF [Yersinia pestis Antiqua] gi|115347534|emb|CAL20443.1| flagellar basal-body rod protein FlgF [Yersinia pestis CO92] gi|145210305|gb|ABP39712.1| flagellar basal-body rod protein FlgF [Yersinia pestis Pestoides F] gi|149292663|gb|EDM42737.1| flagellar basal-body rod protein FlgF [Yersinia pestis CA88-4125] gi|162353105|gb|ABX87053.1| flagellar basal-body rod protein FlgF [Yersinia pestis Angola] gi|165913300|gb|EDR31922.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar Orientalis str. IP275] gi|165922236|gb|EDR39413.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar Orientalis str. F1991016] gi|165990153|gb|EDR42454.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar Antiqua str. E1979001] gi|166208205|gb|EDR52685.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar Antiqua str. B42003004] gi|166962154|gb|EDR58175.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167049476|gb|EDR60884.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167055214|gb|EDR65011.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229680311|gb|EEO76410.1| Flagellar basal-body rod protein flgF [Yersinia pestis Nepal516] gi|229688945|gb|EEO81010.1| Flagellar basal-body rod protein flgF [Yersinia pestis biovar Orientalis str. India 195] gi|229693515|gb|EEO83564.1| Flagellar basal-body rod protein flgF [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701166|gb|EEO89195.1| Flagellar basal-body rod protein flgF [Yersinia pestis Pestoides A] gi|262361785|gb|ACY58506.1| flagellar basal-body rod protein FlgF [Yersinia pestis D106004] gi|262366079|gb|ACY62636.1| flagellar basal-body rod protein FlgF [Yersinia pestis D182038] gi|270335148|gb|EFA45925.1| flagellar basal body rod protein FlgF [Yersinia pestis KIM D27] gi|294354488|gb|ADE64829.1| flagellar basal-body rod protein FlgF [Yersinia pestis Z176003] gi|320015466|gb|ADV99037.1| Flagellar basal-body rod protein flgF [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 209 Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 65/195 (33%), Gaps = 7/195 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A+N++N T GFR V I + V Sbjct: 1 MDHAIYTAMGAARQSLELQAVTANNLANASTPGFRAQLAAMRAV--PIDGPSLATRTMVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + G+ +G LD AL+ D + A++ P TR+G +++ +G + + G Sbjct: 59 TSTPGVDISQGTMNFSGRPLDVALQQDGYLAVQLPDGSEAYTRNGNIQISANGQM-TVQG 117 Query: 120 KYPVLDM---ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + D P + + + V + G + + G Sbjct: 118 YPLMGDNGPIDVPPQAAVTIAADGTISALNAGDSPNTIAQLGQIKRVQATAGEMMHGDDG 177 Query: 177 ISPNIPPTPLEDLSG 191 + P T + Sbjct: 178 LFHLTPETQQARGAQ 192 >gi|241761151|ref|ZP_04759240.1| protein of unknown function DUF1078 domain protein [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241374770|gb|EER64231.1| protein of unknown function DUF1078 domain protein [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 418 Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 32/135 (23%), Positives = 53/135 (39%), Gaps = 4/135 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK-NDIDQKISFVASG 62 +F L A + LS ++N++N+ + GF+ F E+V Sbjct: 2 AFYTSLTGLNAAQTDLSVTSNNIANSGSYGFKKTTTDFGELVADSPLASAKNIGQGTRLR 61 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESP---RGIILTRDGRFKVTDDGSLVSASG 119 GS +T LD + GD +F ++S I LTRDG F + ++V++ G Sbjct: 62 ATIQDFTSGSMKTTNRALDMMVNGDGFFLVKSQGASGTISLTRDGSFLTDKNNNVVTSDG 121 Query: 120 KYPVLDMASVPIQIP 134 Y + I Sbjct: 122 HYLQVYATDNSGNIY 136 Score = 65.7 bits (158), Expect = 6e-09, Method: Composition-based stats. Identities = 15/94 (15%), Positives = 35/94 (37%), Gaps = 5/94 (5%) Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISP-----NIPPTPLEDLSGVTVKRGFLEDSNAN 205 ++ + L V+ G N+ + N+ + +V+ G LE SN + Sbjct: 322 NQYILGAVALGDVNNRNGLHSTGNANWTVTGTSGNLNYREADTSGLGSVQSGALELSNID 381 Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E+ +I + F + + I + + + + Sbjct: 382 LTQELVNLISEQRNFQANSKAISTDNQMVSYVMN 415 >gi|254255087|ref|ZP_04948404.1| Flagellar hook protein FlgE [Burkholderia dolosa AUO158] gi|124899732|gb|EAY71575.1| Flagellar hook protein FlgE [Burkholderia dolosa AUO158] Length = 419 Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 38/196 (19%), Positives = 69/196 (35%), Gaps = 6/196 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SFNI L+ A+ +L ++ N++N T G++ + FS + Sbjct: 30 SFNIALSGIKAINGQLGEISQNIANAGTYGYKAGRANFSAFYL-----GSTPGGVMVGST 84 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASGKYP 122 GS +STG+ +D AL G+ +F ++ +R GRF G+++ G+ Sbjct: 85 SQAMNVAGSLVSTGSGMDAALPGNGFFVTRDANGALVYSRVGRFGTDQHGNVIDYMGRKV 144 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ QI + V + F + + + Sbjct: 145 QGYAAAGGGQIGDLSIPGGGIPAKASESVAYAGNMSADWVVPANGTFDKDDPQSYNRMSS 204 Query: 183 PTPLEDLSGVTVKRGF 198 T L+ L V + Sbjct: 205 QTVLDSLGREHVVNQY 220 Score = 72.2 bits (175), Expect = 6e-11, Method: Composition-based stats. Identities = 10/93 (10%), Positives = 31/93 (33%), Gaps = 5/93 (5%) Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMY 208 + + + + + G V +G + + G LE SN Sbjct: 327 IAGQLAVATFQNADGLVSVSGTGWHASAAAGEALYGVAGAGPIDKLVVGALEQSNVELTE 386 Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 E+ ++ Q + + + ++ + + ++ + Sbjct: 387 ELVNLMSAQQNYQANSKVLSTENEMVRTLMQTL 419 >gi|165925081|ref|ZP_02220913.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar Orientalis str. F1991016] gi|165939053|ref|ZP_02227605.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar Orientalis str. IP275] gi|166008950|ref|ZP_02229848.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar Antiqua str. E1979001] gi|167418761|ref|ZP_02310514.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167466336|ref|ZP_02331040.1| flagellar basal body rod protein FlgF [Yersinia pestis FV-1] gi|229840624|ref|ZP_04460783.1| Flagellar basal-body rod protein flgF [Yersinia pestis biovar Orientalis str. PEXU2] gi|229842825|ref|ZP_04462977.1| Flagellar basal-body rod protein flgF [Yersinia pestis biovar Orientalis str. India 195] gi|294502790|ref|YP_003566852.1| hypothetical protein YPZ3_0680 [Yersinia pestis Z176003] gi|165913009|gb|EDR31634.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar Orientalis str. IP275] gi|165923281|gb|EDR40432.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar Orientalis str. F1991016] gi|165992289|gb|EDR44590.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar Antiqua str. E1979001] gi|166962755|gb|EDR58776.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar Orientalis str. MG05-1020] gi|229690092|gb|EEO82149.1| Flagellar basal-body rod protein flgF [Yersinia pestis biovar Orientalis str. India 195] gi|229696990|gb|EEO87037.1| Flagellar basal-body rod protein flgF [Yersinia pestis biovar Orientalis str. PEXU2] gi|262360822|gb|ACY57543.1| hypothetical protein YPD4_0634 [Yersinia pestis D106004] gi|262364767|gb|ACY61324.1| hypothetical protein YPD8_0634 [Yersinia pestis D182038] gi|294353249|gb|ADE63590.1| hypothetical protein YPZ3_0680 [Yersinia pestis Z176003] Length = 197 Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 42/196 (21%), Positives = 76/196 (38%), Gaps = 6/196 (3%) Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 V S + S TG +LD AL+ A+ S TR+G+ V Sbjct: 1 MGGGYSSRVAVLSQNAGVDMTPASLQETGRDLDIALKNQGLIAVLSGGREAYTRNGQMDV 60 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS---VDM 165 + +G ++ +G + D + + I + G I Q G + + VD+ Sbjct: 61 SAEG-ALTINGLPVLGDGGPIVLPPYSALSIADDGTIAIIPQAGGIKTPEEIERIKLVDI 119 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225 +R+ N G+ + P V V LE SN +++ EM I L+++F + Sbjct: 120 PANQLRKNNRGLLVSNRG-PAARDETVQVVNKHLESSNVSAISEMIASISLSRQFEAQIK 178 Query: 226 LIDENEKSMLEAIRNI 241 ++ E + +A + Sbjct: 179 MMKVAED-LAQAGNRM 193 >gi|90422996|ref|YP_531366.1| hypothetical protein RPC_1485 [Rhodopseudomonas palustris BisB18] gi|90105010|gb|ABD87047.1| protein of unknown function DUF1078-like [Rhodopseudomonas palustris BisB18] Length = 599 Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 30/132 (22%), Positives = 51/132 (38%), Gaps = 12/132 (9%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + +A L ++ N++N+ T F+ I F +++ ND Q V + Sbjct: 6 ALTTSVAGLRTQSYALENISGNIANSQTTAFKRIDTSFLDLIPQTGND-QQLAGSVTAKS 64 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRG-----------IILTRDGRFKVTDDG 112 + GS S A+ GD +FA++ P TR G F + +G Sbjct: 65 RSTNTIQGSVQSASVSTYMAINGDGFFAVQKPGSFSDNNPVFTGVNNYTRRGDFSLDKNG 124 Query: 113 SLVSASGKYPVL 124 LV+ +G Y Sbjct: 125 YLVNGAGYYLQG 136 Score = 62.2 bits (149), Expect = 6e-08, Method: Composition-based stats. Identities = 14/123 (11%), Positives = 36/123 (29%) Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 D + + + +A + + + + + R + Sbjct: 477 NQMQQDGYAAGQLTSVSVSNEGRVVGAYSNGRNIDLAEVSVATFNGANFLKRLDGGAFEV 536 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G ++ LE SN + E ++I Q +++ T +I + + + Sbjct: 537 TNESGAALFGKGGSISGSSLEASNTDIADEFTKLIVTQQAYSANTKVITTANTMVSDLLN 596 Query: 240 NIA 242 I Sbjct: 597 VIR 599 >gi|110641252|ref|YP_668982.1| flagellar hook protein FlgE [Escherichia coli 536] gi|191172366|ref|ZP_03033907.1| flagellar hook protein FlgE [Escherichia coli F11] gi|300982621|ref|ZP_07176205.1| flagellar hook protein FlgE [Escherichia coli MS 200-1] gi|110342844|gb|ABG69081.1| flagellar hook protein FlgE [Escherichia coli 536] gi|190907250|gb|EDV66848.1| flagellar hook protein FlgE [Escherichia coli F11] gi|300307086|gb|EFJ61606.1| flagellar hook protein FlgE [Escherichia coli MS 200-1] gi|324013350|gb|EGB82569.1| flagellar hook protein FlgE [Escherichia coli MS 60-1] Length = 401 Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 72/195 (36%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ L + +N++N+ T GF++ F+++ + V Sbjct: 2 AFSQAVSGLNVAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ +LV+ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q+ K T + S + N+ + N Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDSLPSVNAFDASNAD 176 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 177 SYNKKGSVTVFDSQG 191 Score = 72.2 bits (175), Expect = 6e-11, Method: Composition-based stats. Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + + + +++ +++ + L + ++G ++ S Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 337 Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + T+ G LE SN + E+ MI + + S I ++ + Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397 Query: 238 IR 239 + Sbjct: 398 VN 399 >gi|322378866|ref|ZP_08053283.1| flagellar hook protein FlgE [Helicobacter suis HS1] gi|321148676|gb|EFX43159.1| flagellar hook protein FlgE [Helicobacter suis HS1] Length = 601 Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 29/145 (20%), Positives = 59/145 (40%), Gaps = 21/145 (14%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND------IDQ 54 M + + + + ++++N++N +TVG+R + +F + A + D Sbjct: 1 MNDTLLHAYSGIKTHQFGIDSLSNNLANINTVGYRENEPEFKSLFAAHFDSMSNNVTADD 60 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA---------------LESPRGII 99 + VA G +S + G ++ + ++ + A +G WF + + Sbjct: 61 RNFGVAKGSNAISDKDGEYMPSDSDFNMAYQGSGWFIVGPNKDGSFEIDKDGYKQSQENF 120 Query: 100 LTRDGRFKVTDDGSLVSASGKYPVL 124 TRDG F DG +V+ G Y Sbjct: 121 FTRDGNFLRDADGYIVNTHGYYVYG 145 Score = 66.8 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 16/143 (11%), Positives = 43/143 (30%), Gaps = 17/143 (11%) Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRE 173 + D I + + + + + + +G+ + QG + Sbjct: 456 YEDSRIYQVSQDGKPKGILRNMRIDDDGIIHLSFSNGAIETMGRVGIAAFTNDQGLKKVG 515 Query: 174 NS----------GISPNIPPTPLEDL-------SGVTVKRGFLEDSNANSMYEMGQMIHL 216 ++ G + + P+ + +LE SN N+ + +I + Sbjct: 516 SNLFDISNATRNGRAVPLSGNPILGWDRDDGKLKFGKIMHKYLETSNVNAGRSLTNLILM 575 Query: 217 TQKFNSITTLIDENEKSMLEAIR 239 + ++ + + EAI Sbjct: 576 QRGYSMNAKAFTTGDDLIKEAIN 598 >gi|238755324|ref|ZP_04616667.1| Flagellar hook protein FlgE [Yersinia ruckeri ATCC 29473] gi|238706460|gb|EEP98834.1| Flagellar hook protein FlgE [Yersinia ruckeri ATCC 29473] Length = 427 Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 30/134 (22%), Positives = 58/134 (43%), Gaps = 6/134 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 F+ ++ A L + +N++N+ T GF++ V F+++ Q V Sbjct: 2 GFSQAVSGLNAASSNLDVIGNNIANSATSGFKSGSVSFADMFA-----GSQTGMGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +T LD A+ +F LE GI R+G+F++ ++ ++VS G + Sbjct: 57 ITQDFNDGTPTTTNRRLDLAISQSGFFRLEDSSGGISYARNGQFRLDENRNIVSQQGLHL 116 Query: 123 VLDMASVPIQIPQK 136 A+ Q+ Sbjct: 117 TGYPATGTPPTVQQ 130 Score = 69.1 bits (167), Expect = 4e-10, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 41/141 (29%), Gaps = 9/141 (6%) Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 G + VSA + QI + + + G+++ T + Sbjct: 289 GAMQQNTGSDSVSAQTQTGYAAGEFTGFQIEKDGSVVGTYSNQQKQLLGQIVLT----NF 344 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRG-----FLEDSNANSMYEMGQMIHLTQ 218 +G + ++ + G LE SN + E+ MI + Sbjct: 345 ANPEGLSPQGDNVWKETGSSGAAIIGTAGGGGFGTLTSGALESSNVDLSKELVNMIVAQR 404 Query: 219 KFNSITTLIDENEKSMLEAIR 239 + S I ++ + + Sbjct: 405 NYQSNAQTIKTQDQILQTLVN 425 >gi|322380410|ref|ZP_08054616.1| flagellar hook protein FlgE [Helicobacter suis HS5] gi|321147200|gb|EFX41894.1| flagellar hook protein FlgE [Helicobacter suis HS5] Length = 601 Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 29/145 (20%), Positives = 59/145 (40%), Gaps = 21/145 (14%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND------IDQ 54 M + + + + ++++N++N +TVG+R + +F + A + D Sbjct: 1 MNDTLLHAYSGIKTHQFGIDSLSNNLANINTVGYRENEPEFKSLFAAHFDSMSNNVTADD 60 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA---------------LESPRGII 99 + VA G +S + G ++ + ++ + A +G WF + + Sbjct: 61 RNFGVAKGSNAISDKDGEYMPSDSDFNMAYQGSGWFIVGPNKDGSFEIDKDGYKQSQENF 120 Query: 100 LTRDGRFKVTDDGSLVSASGKYPVL 124 TRDG F DG +V+ G Y Sbjct: 121 FTRDGNFLRDADGYIVNTHGYYVYG 145 Score = 66.8 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 16/143 (11%), Positives = 43/143 (30%), Gaps = 17/143 (11%) Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRE 173 + D I + + + + + + +G+ + QG + Sbjct: 456 YEDSRIYQVSQDGKPKGILRNMRIDDDGIIHLSFSNGAIETMGRVGIAAFTNDQGLKKVG 515 Query: 174 NS----------GISPNIPPTPLEDL-------SGVTVKRGFLEDSNANSMYEMGQMIHL 216 ++ G + + P+ + +LE SN N+ + +I + Sbjct: 516 SNLFDISNATRNGRAVPLSGNPILGWDRDDGKLKFGKIMHKYLETSNVNAGRSLTNLILM 575 Query: 217 TQKFNSITTLIDENEKSMLEAIR 239 + ++ + + EAI Sbjct: 576 QRGYSMNAKAFTTGDDLIKEAIN 598 >gi|333008278|gb|EGK27752.1| flagellar hook protein flgE [Shigella flexneri K-272] gi|333019768|gb|EGK39040.1| flagellar hook protein flgE [Shigella flexneri K-227] Length = 390 Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 31/195 (15%), Positives = 70/195 (35%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+F + ++ +L++ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFMLDENRNLLNMQGLQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q+ K T + S + + N Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNAD 176 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 177 SYNKKGSVTVFDSQG 191 Score = 63.0 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 21/163 (12%), Positives = 51/163 (31%), Gaps = 6/163 (3%) Query: 72 SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPI 131 F + GT +D A+ + + T F + + + + + Sbjct: 229 EFNANGTLVDGAMANNIATGAINGAEPA-TFSLSFLNSMQQNTGANNIVATTQNGYKPGD 287 Query: 132 QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PL 186 + + +++ +++ + L + ++G ++ S Sbjct: 288 LVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTA 347 Query: 187 EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 + T+ G LE SN + E+ MI + + S I Sbjct: 348 GTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKT 390 >gi|261339376|ref|ZP_05967234.1| flagellar hook protein FlgE [Enterobacter cancerogenus ATCC 35316] gi|288318177|gb|EFC57115.1| flagellar hook protein FlgE [Enterobacter cancerogenus ATCC 35316] Length = 402 Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 18/150 (12%), Positives = 46/150 (30%), Gaps = 5/150 (3%) Query: 95 PRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV 154 P T F + + + + + + + +++ +V Sbjct: 251 PGATPATFAMSFANSMQQNTGANNIVATNQNGYKPGDLVSYQINDDGSVVGNYSNEQTQV 310 Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLEDSNANSMYE 209 + + L + ++G ++ S + T+ G LE SN + E Sbjct: 311 LGQIVLANFANNEGLKSEGDNVWSATQSSGVALLGTAGSGNFGTLTNGALEASNVDLSKE 370 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + MI + + S I ++ + + Sbjct: 371 LVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400 Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 30/192 (15%), Positives = 69/192 (35%), Gaps = 11/192 (5%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGSASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F + ++ + +R+G+FK+ ++ +LV+ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRMVDANGSVFYSRNGQFKLDENRNLVNMQGLQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + + IS ++A + + + Sbjct: 117 TGYPVAGTPP-----TVQTGANPQAISIPTTLMAAKSTTTASQQINLNSTDTAPTKAFDA 171 Query: 183 PTPLEDLSGVTV 194 P TV Sbjct: 172 TNPDTYNKKGTV 183 >gi|117926844|ref|YP_867461.1| hypothetical protein Mmc1_3570 [Magnetococcus sp. MC-1] gi|117610600|gb|ABK46055.1| protein of unknown function DUF1078 domain protein [Magnetococcus sp. MC-1] Length = 496 Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 32/217 (14%), Positives = 66/217 (30%), Gaps = 14/217 (6%) Query: 33 GFRTIKVKFSEVVGAIKNDIDQKISFVAS------GKEYLSKEVGSFISTGTELDFALEG 86 G+ + F + G + + I+F + + + + G I+ DF++ Sbjct: 279 GYTAGVLTF-DTYGRLDTEGSTPITFQFTGNSSTAETQQILFDFGDAITADATNDFSIAD 337 Query: 87 DAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG 146 A + G S + A + + Sbjct: 338 GAVLYGSGTNTAEVANTGLLGSVQRASSFTTMSASQNGFSAGFLESLSVG--LDGTINGT 395 Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPN-----IPPTPLEDLSGVTVKRGFLED 201 + + K + +GL D Q + + + + T++ LE+ Sbjct: 396 YTNGETKALYQIGLVDFDNEQALDQVGANLFAETHLSGVPREGEPNSGALGTIRSYTLEN 455 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 SN + EM MI + F + + LI + + E I Sbjct: 456 SNVDMSNEMVNMITTQRAFQANSRLITVTDGMLEELI 492 Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 33/214 (15%), Positives = 61/214 (28%), Gaps = 22/214 (10%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN-----DIDQKIS 57 + G +A ++ + +N+SNT+T F+ + F +V+ Q + Sbjct: 5 QAMYAGSSALTNYGNAMTVIGNNLSNTNTTAFKGSRTTFEDVLIQTVGISGTRASTQIGT 64 Query: 58 FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP-----------------RGIIL 100 V + G F T T D A++G +F + Sbjct: 65 GVGVSAIDQLMQQGGFAGTSTVTDLAIDGQGFFKVRDANPGSAQLGGGGGNATSSMDTFY 124 Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 TR G FK DG +V+ +G + ++ A Sbjct: 125 TRAGDFKQNLDGYMVTNAGLILQGYAVDQTSGETSGSMTDINLATYQSAEPKATTAISVG 184 Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTV 194 + + N P + + V Sbjct: 185 MMLQSDAAIITDANHSTYDPNDPASYNYATPIRV 218 >gi|157959902|ref|YP_001499936.1| flagellar hook protein FlgE [Shewanella pealeana ATCC 700345] gi|157844902|gb|ABV85401.1| flagellar basal body FlaE domain protein [Shewanella pealeana ATCC 700345] Length = 402 Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 58/144 (40%), Gaps = 6/144 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SFNI L+ A Q L+T+++N++N+ TVGFR+ + +FS + + Q Sbjct: 2 SFNIALSGLQATTQDLNTISNNIANSSTVGFRSGRSEFSAIY-----NGGQAGGVNVMST 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASGKYP 122 GS TG +LD ++G+ +F L R G F DG + +G Sbjct: 57 SQNFSMGGSLTYTGRQLDMGIQGEGFFVLSGQDGSTSYARAGMFNQDADGYITDPAGNRL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKG 146 + + + G Sbjct: 117 QGYSIGATGNLQNGNVTDLQVQTG 140 Score = 68.4 bits (165), Expect = 9e-10, Method: Composition-based stats. Identities = 30/204 (14%), Positives = 62/204 (30%), Gaps = 15/204 (7%) Query: 43 EVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTR 102 V + + + T D A+ G A + + Sbjct: 209 SVHYNMDGTDVTPVGGHTLEFDSNGMLTTGNDITLNITDAAIIGGA---SNMELALSFDK 265 Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162 ++ + S ++ +G I+I ++ G+ +G+V+ L Sbjct: 266 STQYAADYNNSSLNQNGYT---SGELNGIRIDDNGMLYGTYTNGQEQIQGQVV----LAD 318 Query: 163 VDMSQGFVRRENSGI-SPNIPPTP----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217 G V N+ + N P + + G+LE SN + EM ++ Sbjct: 319 FSNPNGLVPTSNNAWTASNAAGQPIIGTPTTGTLGGLSAGYLEGSNVDQTAEMVNLMTAQ 378 Query: 218 QKFNSITTLIDENEKSMLEAIRNI 241 + + S ++D N + I Sbjct: 379 RNYQSNAKVLDTNSTMQQALLNAI 402 >gi|167626155|ref|YP_001676449.1| flagellar hook protein FlgE [Shewanella halifaxensis HAW-EB4] gi|167356177|gb|ABZ78790.1| flagellar basal body FlaE domain protein [Shewanella halifaxensis HAW-EB4] Length = 402 Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 58/144 (40%), Gaps = 6/144 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SFNI L+ A Q L+T+++N++N+ TVGFR+ + +FS + + Q Sbjct: 2 SFNIALSGLQATTQDLNTISNNIANSSTVGFRSGRSEFSAIY-----NGGQAGGVNVMNT 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALE-SPRGIILTRDGRFKVTDDGSLVSASGKYP 122 GS TG +LD ++G+ +F L R G F DG + +G Sbjct: 57 SQNFSAGGSLTYTGRQLDMGIQGEGFFMLSGQDGSTTYARAGMFNQNADGFITDPAGSRL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKG 146 + + + G Sbjct: 117 QGYPVGATGNLQTGNVTDLQVQAG 140 Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats. Identities = 16/145 (11%), Positives = 39/145 (26%), Gaps = 6/145 (4%) Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI-ATMGLY 161 S + ++ + G + + + + L Sbjct: 258 SLALSYDKSTQYASDYNNSSLSQNGYTSGELNGIRLDDSGMLYGTYTNGQEQLQGQVVLA 317 Query: 162 SVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + G N+ + + ++ G+LE SN + EM ++ Sbjct: 318 DFNNPNGLEPVSNNAWAATNAAGQPIIGTPTTGTLGSIAGGYLEGSNVDQTAEMVNLMTA 377 Query: 217 TQKFNSITTLIDENEKSMLEAIRNI 241 + + S ++D N + I Sbjct: 378 QRNYQSNAKVLDTNSTMQQALLNAI 402 >gi|296102908|ref|YP_003613054.1| flagellar hook protein FlgE [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057367|gb|ADF62105.1| flagellar hook protein FlgE [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 402 Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 30/192 (15%), Positives = 71/192 (36%), Gaps = 11/192 (5%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGSASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F + ++ + +R+G+FK+ ++ +LV+ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRMVDANGSVFYSRNGQFKLDENRNLVNMQGMQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + + I+ ++A + + + + P Sbjct: 117 TGYPVAGTPS-----TVQTGANPQPINIPTTLMAAKATTTASQQINLNSTDTAPTTAFDP 171 Query: 183 PTPLEDLSGVTV 194 P TV Sbjct: 172 ANPDTYNKKGTV 183 Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 18/150 (12%), Positives = 46/150 (30%), Gaps = 5/150 (3%) Query: 95 PRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV 154 P T F + + + + + + + +++ +V Sbjct: 251 PGATPATFAMSFANSMQQNTGANNIVGTSQNGFKPGDLVSYQINDDGTVVGNYSNEQTQV 310 Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLEDSNANSMYE 209 + + L + ++G ++ S + T+ G LE SN + E Sbjct: 311 LGQIVLANFANNEGLKSEGDNVWSATQSSGVALLGTAGSGNFGTLTNGALEASNVDLSKE 370 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + MI + + S I ++ + + Sbjct: 371 LVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400 >gi|209884509|ref|YP_002288366.1| flagellar basal body FlaE domain protein [Oligotropha carboxidovorans OM5] gi|209872705|gb|ACI92501.1| flagellar basal body FlaE domain protein [Oligotropha carboxidovorans OM5] Length = 602 Score = 73.4 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 15/123 (12%), Positives = 36/123 (29%) Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 D + + +A + L + + R + Sbjct: 480 NQIQNDGFPAGQLQTVSISNNGRVVGNYSNGRNIDLAAITLATFNGPNFLKRVDGGAFEV 539 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G T+ LE SN + E ++I Q +++ T +I + + + + + Sbjct: 540 TDESGQALFGKGGTIVGSSLEGSNTDIADEFTKLIVTQQAYSANTKVITTSNQMVQDLLN 599 Query: 240 NIA 242 + Sbjct: 600 VLR 602 Score = 71.1 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 27/139 (19%), Positives = 51/139 (36%), Gaps = 12/139 (8%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + +A + L ++ N++N+ T F+ I F +++ ++ Q V S Sbjct: 6 ALTTSVAGLRSQSYALENISGNIANSQTTAFKRIDTSFLDLIPDTGSNS-QLAGSVRSSS 64 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRG-----------IILTRDGRFKVTDDG 112 + G + A+ GD +FA++ P TR G F + +G Sbjct: 65 RETNTVQGDVQAAAVSTYMAINGDGFFAVQKPGSFTDNNPVFDGVDRYTRRGDFTLDKNG 124 Query: 113 SLVSASGKYPVLDMASVPI 131 LV+ +G Y Sbjct: 125 YLVNGAGYYLEGIPIDPTT 143 >gi|311280017|ref|YP_003942248.1| fagellar hook-basal body protein [Enterobacter cloacae SCF1] gi|308749212|gb|ADO48964.1| fagellar hook-basal body protein [Enterobacter cloacae SCF1] Length = 402 Score = 73.4 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 32/195 (16%), Positives = 69/195 (35%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ +LV+ G Sbjct: 57 ITQDFTDGTTTNTGRALDVAISQNGFFRLVDSNGSVYYSRNGQFKLDENRNLVNMQGLQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q+ K T + S + Sbjct: 117 TGYPATGTPPTIQQGANPVALNVPNTLMAAKTTTTAAMQINLNSTDKTPTVTPFDATKAD 176 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 177 SYNKKGSVTVYDSQG 191 Score = 73.4 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 17/144 (11%), Positives = 44/144 (30%), Gaps = 5/144 (3%) Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 T F + + S + + + + +++ +V+ + L Sbjct: 257 TFALSFANSMQQNTGSNNIVATNQNGYKPGDLVSYQINDDGTVVGNYSNEQTQVLGQIVL 316 Query: 161 YSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIH 215 + ++G ++ S + + G LE SN + E+ MI Sbjct: 317 ANFANNEGLQSEGDNVWSATKSSGVALLGTAGTGNFGKLTNGALEASNVDLSKELVNMIV 376 Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239 + + S I ++ + + Sbjct: 377 AQRNYQSNAQTIKTQDQILNTLVN 400 >gi|295687864|ref|YP_003591557.1| fagellar hook-basal body protein [Caulobacter segnis ATCC 21756] gi|295429767|gb|ADG08939.1| fagellar hook-basal body protein [Caulobacter segnis ATCC 21756] Length = 425 Score = 73.4 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 27/135 (20%), Positives = 55/135 (40%), Gaps = 6/135 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + + ++ A + LS +++N++N+ T ++T V F +V S V + Sbjct: 6 ALSTAVSGLTAQSRALSAISENIANSSTTAYKTTDVYFQALVSG-GKGSSTSTSAVTAKS 64 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPR-----GIILTRDGRFKVTDDGSLVSAS 118 G+ ST + A++ +F + S + TR+G F+ DG L++ Sbjct: 65 SQAMSVQGTVTSTSVATNVAIQDAGFFVVTSDPAGAASEDMYTRNGSFETNADGYLINTE 124 Query: 119 GKYPVLDMASVPIQI 133 G Y + + Sbjct: 125 GFYLMGWPTDAEGNV 139 Score = 55.6 bits (132), Expect = 5e-06, Method: Composition-based stats. Identities = 11/93 (11%), Positives = 28/93 (30%), Gaps = 5/93 (5%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMYE 209 I + + + G + N + ++ LE S + E Sbjct: 333 IYQIPIATFSNPNGLTLVSGTTYDENSAAGQVHLNLPGEGGAGSLVASALEGSTTDIATE 392 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 +MI Q +++ + ++ I+ + Sbjct: 393 FNKMIIAQQAYSAASQVVSSASDMFDSLIQAVR 425 >gi|218660672|ref|ZP_03516602.1| flagellar hook protein FlgE [Rhizobium etli IE4771] Length = 374 Score = 73.4 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 28/201 (13%), Positives = 59/201 (29%), Gaps = 8/201 (3%) Query: 39 VKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98 F A+ + A G L+ + ++TG ++ + + I Sbjct: 179 AMFRNADAAVGGTTSFPYTTAAVGTGTLNFDANGKLTTGGAVNI-------VDPVTGQTI 231 Query: 99 ILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158 + G ++ D S + V I + + + Sbjct: 232 AMDFSGFTQLGADFSGTGTPNGQAATPVKDVTIDGDGIVYAKYEDGSTKPLYRIPLANVA 291 Query: 159 GLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 + + G V N + P + T+K G LE SN + E+ +MI + Sbjct: 292 SPDKLTLMSGNVYSANGQSGVTVTGFPQTNG-LGTIKSGALEGSNVDLAGELTEMIESQR 350 Query: 219 KFNSITTLIDENEKSMLEAIR 239 + + + + M + Sbjct: 351 SYTANSKVFQTGSDIMDVLVN 371 >gi|310816852|ref|YP_003964816.1| flagellar hook protein FlgE [Ketogulonicigenium vulgare Y25] gi|308755587|gb|ADO43516.1| flagellar hook protein FlgE [Ketogulonicigenium vulgare Y25] Length = 432 Score = 73.4 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 35/167 (20%), Positives = 64/167 (38%), Gaps = 9/167 (5%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 +S N G+A A +L+T++DN++N+ T G++ + +F +V + V + Sbjct: 5 SSMNAGVAGLSANANKLATISDNIANSSTNGYKRAQTEFYAMVIGSSSTKYTAG-GVRTT 63 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI--------ILTRDGRFKVTDDGSL 114 + E G +ST D A+ G + + + I +T G F G L Sbjct: 64 ATRVIDERGPLVSTSNATDIAISGRGFLPVTTLSAIEAGGALPFQMTTTGSFSPNAAGYL 123 Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLY 161 +ASG + A I + G +V+ + Sbjct: 124 TTASGHVLMGWAADSTGSIGTQSRDTTSGLTPVRVLTNQVVGSPTTQ 170 Score = 68.4 bits (165), Expect = 8e-10, Method: Composition-based stats. Identities = 11/93 (11%), Positives = 29/93 (31%), Gaps = 5/93 (5%) Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLEDSNANS 206 +++ + + V G + + + + E S + Sbjct: 337 TRLLYQIPVVDVPNVNGLQALGSQTYAVSQDSGAFFLWDAGAGPTGEMLGYASEGSAVDV 396 Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E+ QMI + ++S +I ++ + E Sbjct: 397 ATELTQMIQTQRAYSSNAKVIQTVDEMLQETTN 429 >gi|222147375|ref|YP_002548332.1| flagellar hook protein FlgE [Agrobacterium vitis S4] gi|221734365|gb|ACM35328.1| flagellar hook protein [Agrobacterium vitis S4] Length = 411 Score = 73.4 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 11/131 (8%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 ++ N ++ A +L+++ DN+SNT T G++ + FS +V S Sbjct: 5 SAMNSSVSGLTAQSNKLTSIGDNISNTSTTGYKGTETAFSSLVNG----------GTTST 54 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWF-ALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 + G ST +E D A++GD +F + + LTR G F++ +DG LV++SG Sbjct: 55 TTQTVSQSGDLESTSSETDLAIDGDGYFVVQDDEGDVFLTRQGDFEIDEDGYLVNSSGYT 114 Query: 122 PVLDMASVPIQ 132 + Sbjct: 115 LLGYSYDNGEP 125 Score = 72.6 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 12/93 (12%), Positives = 29/93 (31%), Gaps = 5/93 (5%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYE 209 + L +V + + + S T++ LE SN + E Sbjct: 319 TYKIALATVASPDNLEEVGGTAYKVDADSGTVVVGFAGTGSFGTIESSTLESSNVDLASE 378 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 + MI + +++ + + + I + Sbjct: 379 LSDMIAAQRAYSANSKVFQTAADMLDTVINMVR 411 >gi|330945585|gb|EGH47092.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv. pisi str. 1704B] Length = 153 Score = 73.4 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 28/147 (19%), Positives = 53/147 (36%), Gaps = 3/147 (2%) Query: 98 IILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157 TR + G L SG + + + + Q+ EI G S Sbjct: 4 EAYTRSSGMNIDALGVLRDGSGLPVMGNGGPIAVPPQQQIEIGADGTISIRSLGESPQVM 63 Query: 158 MGLYS---VDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMI 214 + V + + G+ P + + V V+ GFL+ SN N++ EM ++ Sbjct: 64 AQVDRIKLVRPDLKTMEKGPDGLIHTKTGRPADADATVQVESGFLQASNVNAVEEMTSVL 123 Query: 215 HLTQKFNSITTLIDENEKSMLEAIRNI 241 L+++F ++ E+ R + Sbjct: 124 ALSRQFELHVKMMKTAEEDDQSMARVL 150 >gi|315926654|gb|EFV06034.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 594 Score = 73.4 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 18/144 (12%), Positives = 46/144 (31%), Gaps = 5/144 (3%) Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 T + S + +G+ + + + + K +A M + Sbjct: 448 TSGSNDGLVSSNSASTLTGQATDGYTSGNLKPDAIRVDDKGNILGEFTNGKTFAVAKMAM 507 Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIH 215 SV + G + + T +K LE SN + + ++I Sbjct: 508 ASVANNSGLEEIGGNLFKVTANSGAIVVGEAGTGGRGEMKTSALEMSNVDLSRSLTELII 567 Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239 + + + + + I +++ + I+ Sbjct: 568 IQRGYQANSKTISTSDQMLQTLIQ 591 >gi|161503735|ref|YP_001570847.1| flagellar hook protein FlgE [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160865082|gb|ABX21705.1| hypothetical protein SARI_01820 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 402 Score = 73.4 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 60/134 (44%), Gaps = 6/134 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SF+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 SFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ +LV+ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGMQL 116 Query: 123 VLDMASVPIQIPQK 136 A+ Q+ Sbjct: 117 TGYPATGTPPTIQQ 130 Score = 73.4 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 15/147 (10%), Positives = 45/147 (30%), Gaps = 5/147 (3%) Query: 98 IILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157 T F + + + + + + + +++ +V+ Sbjct: 254 TAATFSLNFLNSMQQNTGANNIVATNQNGYKPGDLVSYQINNDGTVVGNYSNEQEQVLGQ 313 Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQ 212 + L + ++G + ++ + + + G LE SN + E+ Sbjct: 314 IVLANFANNEGLASQGDNVWAATQASGVALLGTAGSGNFGKLTNGALEASNVDLSKELVN 373 Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIR 239 MI + + S I ++ + + Sbjct: 374 MIVAQRNYQSNAQTIKTQDQILNTLVN 400 >gi|226327745|ref|ZP_03803263.1| hypothetical protein PROPEN_01618 [Proteus penneri ATCC 35198] gi|225203449|gb|EEG85803.1| hypothetical protein PROPEN_01618 [Proteus penneri ATCC 35198] Length = 160 Score = 73.4 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 23/116 (19%), Positives = 43/116 (37%), Gaps = 3/116 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + + VA+N++N T GF+ V + D + Sbjct: 1 MDHVIYTAMGGARHSMENQAVVANNLANASTPGFKAQLSAMRAV--PVNGDTLPTRTLTV 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLV 115 + + G+ TG +D AL + + A++ TR+G + DG L+ Sbjct: 59 ASTPGSDQSQGTMNYTGRSMDVALSDNGYLAVQLEDGTEAYTRNGNIQRNADGMLM 114 >gi|197285510|ref|YP_002151382.1| flagellar hook protein FlgE [Proteus mirabilis HI4320] gi|227356001|ref|ZP_03840393.1| flagellar hook protein [Proteus mirabilis ATCC 29906] gi|194682997|emb|CAR43446.1| flagellar hook protein [Proteus mirabilis HI4320] gi|227163989|gb|EEI48891.1| flagellar hook protein [Proteus mirabilis ATCC 29906] Length = 406 Score = 73.4 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 35/192 (18%), Positives = 64/192 (33%), Gaps = 6/192 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SF+ ++ A L T+ +N+SN+ T GF+ V F++V + K+S ++ Sbjct: 2 SFSQAVSGLNAAAANLDTIGNNISNSATYGFKGATVSFADVFAGSGAGLGVKVSGIS--- 58 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASGKYP 122 + + GS +T D A+ G +F +E G+ +R+G F +G L + G Sbjct: 59 --QNFKDGSITTTNRPTDVAISGGGFFRIEDSNGGVFYSRNGEFGKDKNGYLTNMQGMRI 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + + AT + + P Sbjct: 117 TGYPVQNVDGKNVVQKGATPTPIIIPTDMMNASATDKMDMTVNLNSAEEAIDQTTHKFDP 176 Query: 183 PTPLEDLSGVTV 194 V Sbjct: 177 KDNDSYNFSTNV 188 Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 15/121 (12%), Positives = 35/121 (28%), Gaps = 5/121 (4%) Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183 + + E +Q+ +V+ + L + G + ++ S Sbjct: 284 QNGYQAGEFTNFRIEPDGSIMATYSNQQSQVVGQIALANFANPGGLSSQGDNMWSETNGS 343 Query: 184 TPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 + LE SN + E+ MI + + S I ++ + + Sbjct: 344 GSPIVGVAGSGVFGKLTNNALEASNVDMSQELVNMIVAQRNYQSNAQTIKTQDQILQTLV 403 Query: 239 R 239 Sbjct: 404 S 404 >gi|322832564|ref|YP_004212591.1| flagellar hook-basal body protein [Rahnella sp. Y9602] gi|321167765|gb|ADW73464.1| flagellar hook-basal body protein [Rahnella sp. Y9602] Length = 414 Score = 73.4 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 30/130 (23%), Positives = 56/130 (43%), Gaps = 6/130 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SF+ ++ A L + +N++N+ TVGF+T F+++ Q V Sbjct: 2 SFSQAVSGLSAASTNLDVIGNNIANSATVGFKTATASFADMFA-----GSQTGMGVKVAA 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122 + G+ +T LD AL G+ +F L + +R+G+F + + +LV+ G Sbjct: 57 VTQNFNDGTTTNTSRGLDVALSGNGFFRLTDTSGAVYYSRNGQFSLDANRNLVNMQGLSV 116 Query: 123 VLDMASVPIQ 132 A+ Sbjct: 117 TGFPATGTPP 126 Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 19/144 (13%), Positives = 40/144 (27%), Gaps = 5/144 (3%) Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 T F + S S S D + + K +++ + L Sbjct: 269 TVSLDFTGSIQQSTGSDSIGSQTQDGYAAGQMTGYTINDDGTISGTYSNNKTQLLGQIVL 328 Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIH 215 + +G ++ + ++ G LE SN + E+ MI Sbjct: 329 SNFSNPEGLKSEGDNVWTATASSGQAVTGIAGQGGLASMTSGALESSNVDLSAELVNMIV 388 Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239 + + S I + + + Sbjct: 389 AQRNYQSNAQTIKTQDSILNTLVN 412 >gi|254488501|ref|ZP_05101706.1| flagellar hook protein FlgE [Roseobacter sp. GAI101] gi|214045370|gb|EEB86008.1| flagellar hook protein FlgE [Roseobacter sp. GAI101] Length = 432 Score = 73.4 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 44/243 (18%), Positives = 85/243 (34%), Gaps = 20/243 (8%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 +S N G+A A RL++V+DN++N+ T G++ + F+ +V + + V + Sbjct: 5 SSLNAGVAGLQANATRLASVSDNIANSSTYGYKRVVTDFNSLVLSEGSSSYTAG-GVRAS 63 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALE---------SPRGIILTRDGRFKVTDDGS 113 + L E G+ +ST D A+ G + + ++LT G F++ +G Sbjct: 64 SQRLLGEDGALVSTTNSTDLAVRGRGFLPVTTATEFNANSETPEMMLTTTGSFRLDAEGF 123 Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRE 173 L + SG + A+ IP + G + + ++ Sbjct: 124 LKTESGLLLMGWPANADGSIPIYPRDTDDGLRPVQFALNLNGDPTTRVDMSLNLPATATA 183 Query: 174 NSGISPNIPPTPLEDLSGVTVKRGFLE-DSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 G + + T K +E N L+D + Sbjct: 184 AGGSGEPQILSIEYFDNLGTSKSISMEFTPNV-PATGTTN--------EWNVKLMDSAQG 234 Query: 233 SML 235 +L Sbjct: 235 GLL 237 Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats. Identities = 25/143 (17%), Positives = 46/143 (32%), Gaps = 17/143 (11%) Query: 97 GIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156 I LT+DG G V +G + + I Q I +G +S Sbjct: 304 PIALTKDGSPIGNMAGVEVDENGYVNAIYDNGLRNTIYQIPLIDMPNPEGMVSL------ 357 Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 +Q ++ SG + +K E+S + E+ MI Sbjct: 358 --------DAQTYLPSTKSGAY---FLWDSGEGPTGDIKSYSREESTTDVATELTTMIRT 406 Query: 217 TQKFNSITTLIDENEKSMLEAIR 239 + ++S +I ++ + E Sbjct: 407 QRAYSSNAKVIQTVDEMLQETTN 429 >gi|209966998|ref|YP_002299913.1| flagellar hook protein FlgE [Rhodospirillum centenum SW] gi|209960464|gb|ACJ01101.1| flagellar hook protein FlgE [Rhodospirillum centenum SW] Length = 655 Score = 73.4 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 24/163 (14%), Positives = 59/163 (36%), Gaps = 11/163 (6%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + + A + L ++DN++N+ T+G++ ++ F ++ + + V + Sbjct: 6 AMTTAVGGLTAQSRSLGHISDNIANSQTIGYKRVETSFQNLITQSNSSVHSPG-GVRARP 64 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGI----------ILTRDGRFKVTDDGS 113 Y + G+ T + A+ G +F + + TR G F + +G Sbjct: 65 SYTNNIQGNVSQTQFATNMAISGSGFFQVSRGEEVSGTVNFQSQAYFTRAGDFSLDKNGY 124 Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156 L +++G Y + ++ + + I Sbjct: 125 LRNSAGYYLNGWGLRSGTNVVERGTPQPIRVQQLIDNPTATTN 167 Score = 68.0 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 11/98 (11%), Positives = 37/98 (37%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLED 201 + + +V+A + ++ V G + + + + + + +E Sbjct: 555 YDNGRSRVLAQIPIFQVSNPNGMQKTDGNAYVATTDSGAVRASGAGENGAGNLVVSSIEG 614 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E ++I + +++ T ++ ++E + Sbjct: 615 SNVDIADEFTKLIVTQRAYSANTRVVTSANDMLVEVLN 652 >gi|261821153|ref|YP_003259259.1| flagellar hook protein FlgE [Pectobacterium wasabiae WPP163] gi|261605166|gb|ACX87652.1| fagellar hook-basal body protein [Pectobacterium wasabiae WPP163] Length = 405 Score = 73.4 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 56/133 (42%), Gaps = 7/133 (5%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 F+ ++ A L + +N++N+ TVGF++ V F+++ + V Sbjct: 2 GFSQAVSGLNAASNNLDVIGNNIANSATVGFKSGAVTFADMFA-----GSKVGMGVKVAS 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ S+ +LD A+ G ++ ++ +R+G+F + ++V+A G Sbjct: 57 VLQDFGNGTVTSSSRDLDIAISGGGFYRLQDTNGSTYYSRNGQFMLNGR-NIVNAQGMQL 115 Query: 123 VLDMASVPIQIPQ 135 + + Q Sbjct: 116 TGYPVTGTPPVVQ 128 Score = 71.1 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 17/123 (13%), Positives = 35/123 (28%), Gaps = 5/123 (4%) Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 P+ + + E + + + + + L S +G ++ S Sbjct: 281 PIQNGYAPGALTGFAINDDGTIEGNYSNGQKQPLGQILLASFANPEGLSPEGDNAWSETA 340 Query: 182 PPTPLEDLSGVTVKRGFL-----EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 T G L E SN + E+ MI + + S I + + Sbjct: 341 SSGQAVVGLAGTGSLGKLIGKSTESSNVDLSKELVNMIVAQRNYQSNAQTIKTQDSILQT 400 Query: 237 AIR 239 + Sbjct: 401 LVS 403 >gi|187734244|ref|YP_001880752.1| flagellar hook protein FlgE [Shigella boydii CDC 3083-94] gi|187431236|gb|ACD10510.1| flagellar hook protein FlgE [Shigella boydii CDC 3083-94] Length = 402 Score = 73.4 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 21/173 (12%), Positives = 55/173 (31%), Gaps = 6/173 (3%) Query: 72 SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPI 131 F + GT +D A+ + + T F + + + + + Sbjct: 229 EFNANGTLVDGAMANNIATGAINGADPA-TFSLSFLNSMQQNTGANNIVATPQNGYKPGD 287 Query: 132 QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PL 186 + + +++ +++ + L + ++G ++ S Sbjct: 288 LVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTA 347 Query: 187 EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + T+ G LE SN + E+ MI + + S I ++ + + Sbjct: 348 GTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 400 Score = 72.2 bits (175), Expect = 6e-11, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 70/195 (35%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N+ N+ T GF++ F+++ + V Sbjct: 2 AFSQAVSGLNAAATNLDVIGNNIVNSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ +LV+ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q+ K T + S + + N Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNAD 176 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 177 SYNKKGSVTVFDSQG 191 >gi|213026536|ref|ZP_03340983.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 110 Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 55/114 (48%), Gaps = 6/114 (5%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SF+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 SFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVS 116 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ +LV+ Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVN 110 >gi|283833630|ref|ZP_06353371.1| flagellar hook protein FlgE [Citrobacter youngae ATCC 29220] gi|291071313|gb|EFE09422.1| flagellar hook protein FlgE [Citrobacter youngae ATCC 29220] Length = 411 Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 13/122 (10%), Positives = 40/122 (32%), Gaps = 5/122 (4%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + + + +++ +V+ + L + ++G + ++ + Sbjct: 288 NQNGYKPGDLVSYQINNDGTVVGNYSNEQKQVLGQIVLANFANNEGLASQGDNVWAATQS 347 Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + + + G LE SN + E+ MI + + S I ++ + Sbjct: 348 SGVALLGTAGEGNFGKLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 407 Query: 238 IR 239 + Sbjct: 408 VN 409 Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 60/134 (44%), Gaps = 6/134 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGAASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F + +S + +R+G+FK+ ++ ++V+ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRMVDSNGSVFYSRNGQFKLDENRNIVNMQGLQL 116 Query: 123 VLDMASVPIQIPQK 136 A+ Q+ Sbjct: 117 TGYPATGTPPTVQQ 130 >gi|301166803|emb|CBW26380.1| putative flagellar hook protein [Bacteriovorax marinus SJ] Length = 414 Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 39/164 (23%), Positives = 65/164 (39%), Gaps = 3/164 (1%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK---NDIDQKISFVAS 61 NI L ++L V DN++N T GF+ + +FSE++ + DQ + Sbjct: 7 LNITANTSKQLGRKLEMVGDNINNAGTNGFKGSRAEFSEMLNTASMGADGGDQVGAGAII 66 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 G+ + + D A++G FA+ +P G TRDG F+ DG LV++ G Sbjct: 67 DASKRDLSQGTLAHSNSATDLAIDGTGLFAVNTPFGQAYTRDGSFRFDKDGYLVTSDGHK 126 Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 + + + S V TM L + + Sbjct: 127 VLGYNGEEGQESNTVSPLQLSNGSMNASATSNVSMTMNLDARED 170 Score = 55.3 bits (131), Expect = 7e-06, Method: Composition-based stats. Identities = 11/97 (11%), Positives = 29/97 (29%), Gaps = 5/97 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLED 201 + K + + + QG R + N + ++ +E Sbjct: 315 YDNGKSVQLGKIAVAKFTNEQGLRRVGQNLFVGNQTSGQVSLGKSGEQGRGDIRTNAIEQ 374 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 SN + M+ + F++ + + + + I Sbjct: 375 SNVDITNNFVDMMKTQKSFSANSEAMSAIDGLLKNVI 411 >gi|323527713|ref|YP_004229866.1| flagellar hook-basal body protein [Burkholderia sp. CCGE1001] gi|323384715|gb|ADX56806.1| flagellar hook-basal body protein [Burkholderia sp. CCGE1001] Length = 502 Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 68/182 (37%), Gaps = 3/182 (1%) Query: 19 LSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--IDQKISFVASGKEYLSKEVGSFIST 76 L + +N++N +TVGF++ +F+++ +Q + G+ ST Sbjct: 17 LDVIGNNIANANTVGFKSGAAQFADMYANSVATAVGNQVGIGTKLSEVQQQFSQGTITST 76 Query: 77 GTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQK 136 LD A+ G+ +F L + ++ +R+G F++ +G + +A G + A+ I Sbjct: 77 NQALDVAINGNGFFQLSNNGSLVYSRNGVFQLDKNGFITNAQGLQLMGYAANSSGIINTA 136 Query: 137 DEIFNVGEKGEISQKGKVIATMGLY-SVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVK 195 + I+ K + GL + + + N + Sbjct: 137 QTVPLSVPTANIAPKATTNISAGLNLNAQDPLMLGTPSVTASASNTGTLTSPGATITNTA 196 Query: 196 RG 197 G Sbjct: 197 SG 198 Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 14/125 (11%), Positives = 35/125 (28%), Gaps = 5/125 (4%) Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 D + +Q+ + + L + G V N+ Sbjct: 377 NSLQPDGYAAGTLTSFTIGADGTLTGNYSNQQTAALGQIVLANFSNQNGLVNLGNNEFQQ 436 Query: 180 NIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 + + + ++ G +E+SN + E+ +I + + + I + Sbjct: 437 TSQSGVAQISAPGSTNHGVLQGGAVENSNVDLTSELVDLITAQRNYQANAQTIKTQQTVD 496 Query: 235 LEAIR 239 I Sbjct: 497 QTLIN 501 >gi|218509412|ref|ZP_03507290.1| flagellar hook protein FlgE [Rhizobium etli Brasil 5] Length = 196 Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 17/121 (14%), Positives = 35/121 (28%), Gaps = 1/121 (0%) Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178 + V I + + + + + G V N Sbjct: 74 NGQAATPVKDVTIDGDGIVYAKYEDGSTKPLYRIPLANVASPDKLTLMSGNVYSANGQSG 133 Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 + P + T+K G LE SN + E+ +MI + + + + + M + Sbjct: 134 VTVTGFPQTNG-LGTIKSGALEGSNVDLAGELTEMIEAQRSYTANSKVFQTGSDIMDVLV 192 Query: 239 R 239 Sbjct: 193 N 193 >gi|148258440|ref|YP_001243025.1| putative flagellar hook protein FlgE [Bradyrhizobium sp. BTAi1] gi|146410613|gb|ABQ39119.1| putative flagellar hook protein FlgE [Bradyrhizobium sp. BTAi1] Length = 466 Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 29/133 (21%), Positives = 58/133 (43%), Gaps = 8/133 (6%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + + A ++ ++ N++NT T G++ + FS+++ + S VA + Sbjct: 6 ALLTAFSGMKAQSYAMANISGNIANTQTPGYKYVDTSFSDLISSQTRKQAVAGSVVAEAR 65 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRG-------IILTRDGRFKVTDDGSLVS 116 S G+ +TGT + A+ G A+F+++ G + TR G F + DG L++ Sbjct: 66 FTNS-VQGALRATGTSTNMAINGPAFFSVQQKTGDSKFSGVPLYTRRGDFTIDKDGYLMN 124 Query: 117 ASGKYPVLDMASV 129 + Y Sbjct: 125 GADLYLFGTNLDP 137 Score = 68.4 bits (165), Expect = 8e-10, Method: Composition-based stats. Identities = 15/124 (12%), Positives = 36/124 (29%), Gaps = 1/124 (0%) Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 D + +A G+ + Sbjct: 343 NTLAQDGYPAGSLKSLSVTSEGTIVGTFTNDMTAAVAVAGVANFANPNALKPASGGSYEQ 402 Query: 180 NIPPTPLEDL-SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 P +G T+ G +E SN++ E ++I Q +++ ++ +++ M + + Sbjct: 403 TRDSGPPIAGLNGATIVGGNVEASNSDVAGEFSKLIATQQAYSANVKVMTTSQQMMSDLL 462 Query: 239 RNIA 242 I Sbjct: 463 NAIR 466 >gi|254227983|ref|ZP_04921413.1| Flagellar hook protein FlgE [Vibrio sp. Ex25] gi|262396035|ref|YP_003287888.1| flagellar hook protein FlgE [Vibrio sp. Ex25] gi|151939479|gb|EDN58307.1| Flagellar hook protein FlgE [Vibrio sp. Ex25] gi|262339629|gb|ACY53423.1| flagellar hook protein FlgE [Vibrio sp. Ex25] Length = 398 Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 32/132 (24%), Positives = 52/132 (39%), Gaps = 6/132 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SFNI L+ A L+T++ N++N T GF+ + +FS V + Q + Sbjct: 2 SFNIALSGLDATNTELNTISHNIANASTYGFKGGRTEFSAVY-----NGMQPGGVEVASI 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122 + GS TG +D A+ G +F + + TR G F D + + SG Sbjct: 57 SQNFDKDGSISGTGRAMDLAINGGGFFVTKDNMGQTLYTRSGVFATDKDNFVTANSGAKL 116 Query: 123 VLDMASVPIQIP 134 + Sbjct: 117 QGYSVDSNNNLM 128 Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats. Identities = 16/134 (11%), Positives = 43/134 (32%), Gaps = 9/134 (6%) Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172 VS + +++ ++ G+ +G+V+ L +QG + Sbjct: 269 FGVSTNSPNGYTSGELAGVRVEGNGMVYATYTNGQSQLQGQVV----LADFANTQGLAKV 324 Query: 173 ENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 + + + + + G LE SN + E+ ++ + + + I Sbjct: 325 SGTAWTQSFSSGAPITGVPGSGTLGDLTPGALEGSNVDLTSELVALMTAQRNYQANAKTI 384 Query: 228 DENEKSMLEAIRNI 241 ++K + Sbjct: 385 STSDKLTQALFNAV 398 >gi|218663526|ref|ZP_03519456.1| flagellar hook protein FlgE [Rhizobium etli IE4771] Length = 384 Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 13/73 (17%), Positives = 27/73 (36%), Gaps = 1/73 (1%) Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 G V N + P + +++ G LE SN + E+ +MI + + + + + Sbjct: 310 SGNVYTANGQSGVTVTGFPQTNG-LGSIQSGALESSNVDLAGELTEMIEAQRSYTANSKV 368 Query: 227 IDENEKSMLEAIR 239 M + Sbjct: 369 FQTGSDIMDVLVN 381 >gi|213028802|ref|ZP_03343249.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 293 Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 15/147 (10%), Positives = 45/147 (30%), Gaps = 5/147 (3%) Query: 98 IILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157 T F + + + + + + + +++ +V+ Sbjct: 145 TAATFSLSFLNSMQQNTGANNIVATNQNGYKPGDLVSYQINNDGTVVGNYSNEQEQVLGQ 204 Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQ 212 + L + ++G + ++ + + + G LE SN + E+ Sbjct: 205 IVLANFANNEGLASQGDNVWAATQASGVALLGTAGSGNFGKLTNGALEASNVDLSKELVN 264 Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIR 239 MI + + S I ++ + + Sbjct: 265 MIVAQRNYQSNAQTIKTQDQILNTLVN 291 >gi|299131804|ref|ZP_07024999.1| fagellar hook-basal body protein [Afipia sp. 1NLS2] gi|298591941|gb|EFI52141.1| fagellar hook-basal body protein [Afipia sp. 1NLS2] Length = 604 Score = 73.0 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 15/123 (12%), Positives = 36/123 (29%) Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 D + + +A + L + + R + Sbjct: 482 NQIQNDGFPAGQLQTVSISNNGRVVGNYSNGRNIDLAAITLATFNGPNFLKRVDGGAFEV 541 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G T+ LE SN + E ++I Q +++ T +I + + + + + Sbjct: 542 TDESGQALFGKGGTIVGSSLEGSNTDIADEFTKLIVTQQAYSANTKVITTSNQMVQDLLN 601 Query: 240 NIA 242 + Sbjct: 602 VLR 604 Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 27/139 (19%), Positives = 51/139 (36%), Gaps = 12/139 (8%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + +A + L ++ N++N+ T F+ I F +++ + Q V+S Sbjct: 6 ALTTSVAGLRSQSYALENISGNIANSQTTAFKRIDTSFLDLIPDTGANA-QLAGSVSSSS 64 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRG-----------IILTRDGRFKVTDDG 112 + G + A+ GD +FA++ P TR G F + +G Sbjct: 65 RETNTVQGDVQAASVATYMAINGDGFFAVQKPGSFTDNNPVFDGVDRYTRRGDFTLDKNG 124 Query: 113 SLVSASGKYPVLDMASVPI 131 LV+ +G Y Sbjct: 125 YLVNGAGYYLEGIPIDPTT 143 >gi|260779347|ref|ZP_05888239.1| flagellar hook protein FlgE [Vibrio coralliilyticus ATCC BAA-450] gi|260605511|gb|EEX31806.1| flagellar hook protein FlgE [Vibrio coralliilyticus ATCC BAA-450] Length = 362 Score = 73.0 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 31/131 (23%), Positives = 54/131 (41%), Gaps = 6/131 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SFNI L+ A L+T++ N++N T GF+ + +F+ V + Q + Sbjct: 2 SFNIALSGLDATNTELNTISHNIANASTYGFKGARTEFAAVY-----NGMQPGGVEVASI 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGKYP 122 + GS TG +D A+ G+ +F + G + TR G F D ++ +G Sbjct: 57 SQNFDKNGSVSGTGRAMDLAINGNGFFVTKDSAGQLLYTRSGVFGTDKDNYVIGNTGAKL 116 Query: 123 VLDMASVPIQI 133 + Sbjct: 117 QGYSVDGNNNL 127 >gi|238785497|ref|ZP_04629480.1| Flagellar hook protein FlgE [Yersinia bercovieri ATCC 43970] gi|238713599|gb|EEQ05628.1| Flagellar hook protein FlgE [Yersinia bercovieri ATCC 43970] Length = 419 Score = 73.0 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 56/134 (41%), Gaps = 6/134 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 F+ ++ A L + +N++N+ T GF+ V F+++ Q V Sbjct: 2 GFSQAVSGLNAASSNLDVIGNNIANSATSGFKAGSVSFADMFA-----GSQTGMGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +T LD A+ + +F ++ GI R+G+FK+ D ++++ G Sbjct: 57 ITQDFNDGTATTTNRRLDLAISQNGFFRMQDSSGGIFYARNGQFKLDADRNIINMQGLSL 116 Query: 123 VLDMASVPIQIPQK 136 A+ Q+ Sbjct: 117 TGYPATGTPPTIQQ 130 Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 12/123 (9%), Positives = 35/123 (28%), Gaps = 5/123 (4%) Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 + + + + +++ + + + +G ++ + Sbjct: 295 QNQTGYAAGEFTGFQINNDGSVVGTYSNSQTQLLGQIVMANFANPEGLSSEGDNVWKETL 354 Query: 182 PPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 T+ G LE SN + E+ MI + + S I ++ + Sbjct: 355 ASGNPMLGTAGGGGFGTLTSGALESSNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILQT 414 Query: 237 AIR 239 + Sbjct: 415 LVN 417 >gi|170751911|ref|YP_001758171.1| hypothetical protein Mrad2831_5543 [Methylobacterium radiotolerans JCM 2831] gi|170658433|gb|ACB27488.1| protein of unknown function DUF1078 domain protein [Methylobacterium radiotolerans JCM 2831] Length = 461 Score = 73.0 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 31/211 (14%), Positives = 67/211 (31%), Gaps = 22/211 (10%) Query: 1 MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 M ++ ++ + +S ++ N++N+ T G++ I F +++ D + Sbjct: 1 MDLFSALQTSVSGLQSQSYAISNISGNIANSQTTGYKRIDTSFVDLMSEKTPD-REIAGS 59 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-----------LTRDGRFK 107 V + + + G+ +S+ + A+ G +F + G TR G F Sbjct: 60 VLAKSQLTNTLAGNIVSSSVPTNMAINGQGFFTVVQKTGDANGATTFGGTDLYTRRGDFA 119 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 DG LV+ +G Y G I + ++ + Sbjct: 120 QDKDGYLVNGAGGYLTGSNLDPIT--------GQTTSIGPIKIGNATLPAQATTTITYAA 171 Query: 168 GFVRRENSGISPNIPPTPLEDLSGVTVKRGF 198 ++ S + V G Sbjct: 172 NLPSTPSTSASATSGSDLYNQNTAAVVTSGS 202 Score = 65.3 bits (157), Expect = 7e-09, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 33/89 (37%), Gaps = 1/89 (1%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFL-EDSNANSMYEMGQM 213 +A++G+ + G N + P + G E SN + E +M Sbjct: 373 LASVGVVQFANADGLKADTNGNYLQTVDSGPPLSGLNGSTISGASNEQSNTDIASEFSKM 432 Query: 214 IHLTQKFNSITTLIDENEKSMLEAIRNIA 242 I Q +++ T ++ + M + + I Sbjct: 433 IVTQQAYSANTRVMSTAQTMMSDLLNVIR 461 >gi|27378811|ref|NP_770340.1| flagellar hook protein FlgE [Bradyrhizobium japonicum USDA 110] gi|27351960|dbj|BAC48965.1| flgE [Bradyrhizobium japonicum USDA 110] Length = 421 Score = 73.0 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 62/168 (36%), Gaps = 3/168 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + + ++A A Q LS ++DN++N+DT G++T F +V A N V Sbjct: 6 ALSSAISALSAQSQSLSMISDNIANSDTTGYKTTSAMFDALVTASSNATSYASGGVTVSG 65 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWF---ALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + G +T D A++G +F S I TR+G F + + G L + Sbjct: 66 RANITQQGLLAATSNATDVAIQGSGFFAVSNSTSGGTISYTRNGAFTINNAGYLENNGNY 125 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 + + + +++ T + ++ Sbjct: 126 LEGWRTDADGNVVGNESASNLTAINTQVASTSGSATTKTTVAANLPSD 173 Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 14/101 (13%), Positives = 32/101 (31%), Gaps = 5/101 (4%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLED 201 + + I + + + G R + S + + T+ LE Sbjct: 321 YSNGQTIAIYKIAVATFADPNGLSARSDGIYSATVTSGNAALQASGENGAGTIYGSELES 380 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S ++ + MI Q +++ + +I K I + Sbjct: 381 STTDTSSQFSSMISAQQAYSAASQVISTVNKMYDTLISAMR 421 >gi|315931307|gb|EFV10276.1| flagellar hook protein FlgE [Campylobacter jejuni subsp. jejuni 327] Length = 847 Score = 73.0 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 17/144 (11%), Positives = 46/144 (31%), Gaps = 5/144 (3%) Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 T + S + +G+ + + + + K +A + + Sbjct: 701 TSGSNDGLVSSNSASTLTGQATDGYTSGNLKPDAIRVDDKGNILGEFTNGKTFAVAKIAM 760 Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIH 215 SV + G + + T +K LE SN + + ++I Sbjct: 761 ASVANNSGLEEIGGNLFKVTANSGNIVVGEAGTGGRGEMKTSALEMSNVDLSRSLTELII 820 Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239 + + + + + I +++ + I+ Sbjct: 821 IQRGYQANSKTISTSDQMLQTLIQ 844 Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 29/165 (17%), Positives = 52/165 (31%), Gaps = 14/165 (8%) Query: 19 LSTVADNMSNTDTVGFRTIKVKFSEVVGAI------------KNDIDQKISFVASGKEYL 66 + +N+SN +T GF+ + F + ++ Q V+ Sbjct: 1 MDVEGNNISNVNTTGFKYSRADFGTMFSQTVKIATAPTDGRGGSNPLQIGLGVSVSSTTR 60 Query: 67 SKEVGSFISTGTELDFALEGDAWFALES--PRGIILTRDGRFKVTDDGSLVSASGKYPVL 124 GS +T D A+ GD +F + LTR G FK+ G+ V+ +G Sbjct: 61 IHSQGSVQTTDKNTDVAINGDGFFMVSDDGGLTNYLTRSGDFKLDAYGNFVNNAGFVVQG 120 Query: 125 DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169 + Q +T +++ G Sbjct: 121 WNINWDDQTIDSSRTPQNIFIDPGMHIPAAKSTEVAIKANLNSGL 165 >gi|1272368|gb|AAA97476.1| LfgE [Vibrio parahaemolyticus] Length = 362 Score = 73.0 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 29/132 (21%), Positives = 51/132 (38%), Gaps = 6/132 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SFNI L+ A L+T++ N++N T GF+ + +F+ V + Q + Sbjct: 2 SFNIALSGLDATNTELNTISHNIANASTYGFKGARTEFAAVY-----NGMQPGGVEVASI 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122 + GS TG +D A+ G +F + + TR G F + + +G Sbjct: 57 SQNFDKNGSITGTGRSMDLAINGSGFFVTKDHMGQTLYTRSGVFGTDKSNFVTANNGAKL 116 Query: 123 VLDMASVPIQIP 134 + Sbjct: 117 QGYSVDSNNNLM 128 >gi|226327746|ref|ZP_03803264.1| hypothetical protein PROPEN_01619 [Proteus penneri ATCC 35198] gi|225203450|gb|EEG85804.1| hypothetical protein PROPEN_01619 [Proteus penneri ATCC 35198] Length = 406 Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 33/192 (17%), Positives = 63/192 (32%), Gaps = 6/192 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SF+ ++ A L T+ +N+SN+ T GF+ V F++V + K++ ++ Sbjct: 2 SFSQAVSGLNAAAANLDTIGNNISNSATYGFKGASVSFADVFAGSGAGLGVKVAGIS--- 58 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 + + GS +T D A+ G +F + G+ +R+G F +G L + G Sbjct: 59 --QNFKDGSITTTNRPTDVAISGGGFFRIEDQNGGVFYSRNGEFGKDKNGFLTNMQGMRV 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + + AT + + P Sbjct: 117 TGYPVQSVDGKNVVQKGATPTPIVIPTDMMNASATDKVDMTVNLNSAEEPIDQTTHAFNP 176 Query: 183 PTPLEDLSGVTV 194 V Sbjct: 177 KDNDSYNFSTNV 188 Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 15/121 (12%), Positives = 36/121 (29%), Gaps = 5/121 (4%) Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183 + + E +Q+ +V+ + L + + G + ++ S Sbjct: 284 QNGYQAGEFTNFRIEQDGSIMATYSNQQSQVVGQIALANFANAGGLSSQGDNMWSETNGS 343 Query: 184 TPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 + LE SN + E+ MI + + S I ++ + + Sbjct: 344 GSPIVGVAGSGVFGKLTNNALEASNVDMSQELVNMIVAQRNYQSNAQTIKTQDQILQTLV 403 Query: 239 R 239 Sbjct: 404 S 404 >gi|99082779|ref|YP_614933.1| hypothetical protein TM1040_2939 [Ruegeria sp. TM1040] gi|99039059|gb|ABF65671.1| Flagellar hook protein flgE [Ruegeria sp. TM1040] Length = 422 Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 34/140 (24%), Positives = 61/140 (43%), Gaps = 9/140 (6%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 +S N G+A A RL+ ++DN++N+ T G++ + F +V + V+ Sbjct: 5 SSLNAGVAGLAANSTRLAAISDNIANSSTAGYKRVVTSFESMVISQSGGRYAAG-GVSVN 63 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALE--------SPRGIILTRDGRFKVTDDGSL 114 + E S IST D A+ G + + ++LT G F+ D+G L Sbjct: 64 NTRMIDERSSLISTSNATDLAVAGRGFLPVASLAEVKAGEDPNMLLTTSGSFRTNDEGYL 123 Query: 115 VSASGKYPVLDMASVPIQIP 134 ++SG + A+ +P Sbjct: 124 TTSSGLVLLGWPANSDGTLP 143 Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 13/98 (13%), Positives = 33/98 (33%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLED 201 + +++ + L + + G ++ P+ TV E+ Sbjct: 322 YENGSSRIVYQIPLADMPNANGMRSLDSQTFMPSPDSGAYYLWDAGAGPTGTVASYRQEE 381 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S + E+ MI + ++S +I ++ + E Sbjct: 382 SGTDVASELTTMIQTQRAYSSNAKVIQTVDEMLQETTN 419 >gi|332088750|gb|EGI93862.1| flagellar hook protein flgE [Shigella boydii 5216-82] Length = 401 Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 34/195 (17%), Positives = 73/195 (37%), Gaps = 6/195 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F+ ++ A L + +N++N+ T GF++ F+++ + V Sbjct: 2 AFSQAVSGLNAAATNLYVIGNNIANSATYGFKSGTASFADMFA-----GSKVGLGVKVAG 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ +TG LD A+ + +F ++S + +R+G+FK+ ++ +LV+ G Sbjct: 57 ITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQL 116 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 A+ Q+ K T + S + N+ + N Sbjct: 117 TGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPSVNAFDASNAD 176 Query: 183 PTPLEDLSGVTVKRG 197 + V +G Sbjct: 177 SYNKKGSVTVFDSQG 191 Score = 72.2 bits (175), Expect = 6e-11, Method: Composition-based stats. Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 5/122 (4%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 + + + +++ +++ + L + ++G ++ S Sbjct: 278 TQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQS 337 Query: 183 PT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + T+ G LE SN + E+ MI + + S I ++ + Sbjct: 338 SGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTL 397 Query: 238 IR 239 + Sbjct: 398 VN 399 >gi|163735543|ref|ZP_02142975.1| flagellar hook protein FlgE, putative [Roseobacter litoralis Och 149] gi|161391163|gb|EDQ15500.1| flagellar hook protein FlgE, putative [Roseobacter litoralis Och 149] Length = 416 Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 15/123 (12%), Positives = 39/123 (31%), Gaps = 5/123 (4%) Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 D +++ + + + + + I + L +V G ++ P+ Sbjct: 291 VTKDGSAIGNFVGVDVDPNGFVRASFDTGEIRTIYQIPLINVPNPNGLQAFDSQTYLPSR 350 Query: 182 PP-----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 D + E+S + E+ MI + ++S +I ++ + E Sbjct: 351 QSGAFFLWNAGDGPTGDIVSFAREESTTDVAGELTDMIKTQRAYSSNAKVIQTVDEMLQE 410 Query: 237 AIR 239 Sbjct: 411 TTN 413 Score = 56.8 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 30/149 (20%), Positives = 58/149 (38%), Gaps = 10/149 (6%) Query: 19 LSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGT 78 +++++DN++N+ T G++ ++ F +V + V + + L E G+ +ST Sbjct: 1 MASISDNIANSSTFGYKRVQTDFESMVLSSGG-GSYAAGGVRANTQRLIDERGTLVSTSN 59 Query: 79 ELDFALEGDAWFALES---------PRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASV 129 D A+ G + + LT G F+ +G L S SG + A+ Sbjct: 60 STDLAVRGGGMLPVAQSAQVQTAGADAPMFLTTTGSFRTDAEGYLTSQSGLVLMGWPAAA 119 Query: 130 PIQIPQKDEIFNVGEKGEISQKGKVIATM 158 IP G + G++ Sbjct: 120 DGSIPVYPRDTADGLEPVRIATGQLAGNP 148 >gi|254511352|ref|ZP_05123419.1| flagellar hook protein FlgE [Rhodobacteraceae bacterium KLH11] gi|221535063|gb|EEE38051.1| flagellar hook protein FlgE [Rhodobacteraceae bacterium KLH11] Length = 439 Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 8/139 (5%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 +S N G+AA A RL+T++DN++N+ T G++ ++ F +V + + V + Sbjct: 13 SSLNAGVAALKANANRLATISDNIANSSTFGYKRVETDFHSMVTSGQGGSYSAG-GVRTT 71 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-------LTRDGRFKVTDDGSLV 115 + L + GS ++T D A+ G + I LT G F+ ++G LV Sbjct: 72 SQRLIDQRGSLVTTNNSTDLAVRGRGMLPVRPSSQIAAGSNEMMLTTTGSFRTNEEGYLV 131 Query: 116 SASGKYPVLDMASVPIQIP 134 + SG + A+ IP Sbjct: 132 TQSGLVLLGWRAAADGSIP 150 Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 14/120 (11%), Positives = 38/120 (31%), Gaps = 5/120 (4%) Query: 125 DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP- 183 D ++V + + + + + + L V G ++ +P+ Sbjct: 317 DGSAVGTMTSVQVDENGYVYAFYDTGVSRRMFQIPLADVPNPNGLTALDSQTYAPSRDSG 376 Query: 184 ----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + + E+S + E+ MI + ++S +I ++ + E Sbjct: 377 TFFLWNAGEGPTGDLVSFAREESTTDVATELTSMIQTQRAYSSSAKVIQTVDEMLQETTN 436 >gi|163738039|ref|ZP_02145455.1| S-adenosyl-L-homocysteine hydrolase [Phaeobacter gallaeciensis BS107] gi|161388655|gb|EDQ13008.1| S-adenosyl-L-homocysteine hydrolase [Phaeobacter gallaeciensis BS107] Length = 440 Score = 72.6 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 33/143 (23%), Positives = 58/143 (40%), Gaps = 10/143 (6%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 +S N G+A A RL++++DN++N T G++ ++ F +V + V + Sbjct: 12 SSLNAGVAGLSANASRLASISDNIANASTPGYKRVQTDFHSMVMSSSGGAYSAG-GVRTT 70 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFAL---------ESPRGIILTRDGRFKVTDDGS 113 L E G ++T D A+ G + + ++LT F+ DG Sbjct: 71 NVRLIDERGPLVTTSNATDLAVRGRGMLPVASINEVETGATNPQMMLTTTASFRTNADGL 130 Query: 114 LVSASGKYPVLDMASVPIQIPQK 136 L + SG + A IP Sbjct: 131 LATESGLVLMGWPAQSDGTIPPY 153 Score = 68.0 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 15/120 (12%), Positives = 37/120 (30%), Gaps = 5/120 (4%) Query: 125 DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP- 183 D A V + + + +V+ + L + G + + P+ Sbjct: 318 DGAPVGNFTGVEIDEAGFVHANYDTGVSRVVYQVPLVDLPNPNGMIAMDRQTYMPSSESG 377 Query: 184 ----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + + E+S + E+ MI + ++S +I ++ + E Sbjct: 378 SYFLWNAGEGPTGDILGYAREESATDVAGELTNMIQTQRAYSSNAKVIQTVDEMLQETTN 437 >gi|163744346|ref|ZP_02151706.1| flagellar hook protein FlgE [Oceanibulbus indolifex HEL-45] gi|161381164|gb|EDQ05573.1| flagellar hook protein FlgE [Oceanibulbus indolifex HEL-45] Length = 422 Score = 72.6 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 57/162 (35%), Gaps = 12/162 (7%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 ++ IG++ A R+ ++ N++N +TVG+R +F + + + V + Sbjct: 5 SALQIGVSGLQANSSRVQNISSNIANANTVGYRRTFSEF------VTQNTGSTQAGVLTD 58 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWF------ALESPRGIILTRDGRFKVTDDGSLVS 116 G+ + T + D A++GD +F LTR G F +G L + Sbjct: 59 VRANISTNGNIVGTNSTTDLAVQGDGFFVVSRNANDPIESNYYLTRAGSFTPDQNGDLRN 118 Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158 ++G + +V T Sbjct: 119 SAGYFLSGFPTDAAGNTGSVSSTSYNDLSTVNIASYQVQGTP 160 Score = 72.2 bits (175), Expect = 6e-11, Method: Composition-based stats. Identities = 10/83 (12%), Positives = 29/83 (34%), Gaps = 5/83 (6%) Query: 162 SVDMSQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLEDSNANSMYEMGQMIHL 216 +V + + + + ++ LE SN + E+ +I Sbjct: 337 NVANPDQMRSVDGNAYVATRDSGAVSLGNPMLNGLGSINSNALEGSNVDIAQELTDLIQT 396 Query: 217 TQKFNSITTLIDENEKSMLEAIR 239 + ++S +I +++ + E + Sbjct: 397 QRAYSSSAKIITTSDEMLSETLN 419 >gi|15895423|ref|NP_348772.1| flagellar hook protein FlgE [Clostridium acetobutylicum ATCC 824] gi|15025147|gb|AAK80112.1|AE007716_1 Flagellar hook protein FlgE [Clostridium acetobutylicum ATCC 824] gi|325509569|gb|ADZ21205.1| Flagellar hook protein FlgE [Clostridium acetobutylicum EA 2018] Length = 423 Score = 72.6 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 16/130 (12%), Positives = 36/130 (27%), Gaps = 1/130 (0%) Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ-GF 169 G + G I Q G + G + M + G Sbjct: 291 KGFSIGQDGVITANLDNGSAAAIGQIAMSSFTNAGGLEKEGGNYVKPSASSGQPMVRSGA 350 Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 + + + G LE SN + + MI ++ + + +I Sbjct: 351 YSNKLDPTFISSAKKEDNSGGYGKMYSGALEMSNVDLAQQFSDMIVASRAYQANGKIITT 410 Query: 230 NEKSMLEAIR 239 +++ + + + Sbjct: 411 SDEILQDLVN 420 Score = 68.0 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 35/186 (18%), Positives = 63/186 (33%), Gaps = 38/186 (20%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID------- 53 M + G++ + +L V N++N+ T +++ + FS+ + Sbjct: 1 MLRAMTSGISGLKVNQNKLDIVGSNIANSSTTAYKSQSINFSDAISETIKGASGATANYG 60 Query: 54 -----QKISFVASGKEYLSKEVGSFISTGTELDFAL-EGDAWFA---------------- 91 Q V S + GS +TG LD A+ +GD +F Sbjct: 61 GVNPEQITLGVNSSAIITNTASGSVNTTGRNLDVAITDGDGYFMVASGANMADESECINV 120 Query: 92 ---------LESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNV 142 S I TRDG F + ++G+LV+A G+ + + + Sbjct: 121 STTDHSITSTPSGTDISYTRDGSFNLDNEGNLVTADGRKVLGYSMVGRNTLYEDSADKTK 180 Query: 143 GEKGEI 148 G Sbjct: 181 NIYGNF 186 >gi|32490790|ref|NP_871044.1| hypothetical protein WGLp041 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25165996|dbj|BAC24187.1| flgE [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 410 Score = 72.6 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 32/130 (24%), Positives = 59/130 (45%), Gaps = 6/130 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SF G+ + Q L + +N++N+ T+GF++ V FS++ + ++S V Sbjct: 2 SFIQGINGINSAAQALDVIGNNIANSQTIGFKSSYVSFSDIFSGSMVGLGSQLSNV---- 57 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 + GS ++ LD A+ G+ +F +S I TR+G FK+ +V+ K+ Sbjct: 58 -TQNFASGSMVTGSKNLDMAISGNGFFRLSDSGGKIYFTRNGEFKLNSHRQIVNLQNKFL 116 Query: 123 VLDMASVPIQ 132 A Sbjct: 117 TGYQARGNPP 126 Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats. Identities = 16/129 (12%), Positives = 38/129 (29%), Gaps = 5/129 (3%) Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 Y ++ V + + ++IA + + + + G + Sbjct: 280 DNQINYQKINGHGVGKFNDYNVSDSGKIIANYSNGQTQLIAQIAMANFTNNLGLTPNGEN 339 Query: 176 GISPNIPPTP-----LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + P E S + LE SN + E+ +M+ + S I Sbjct: 340 CWLESAESGPAIIGLSETGSFGRISGQKLESSNVDISNELVKMMTQQSNYQSNAQTIKTQ 399 Query: 231 EKSMLEAIR 239 ++ + + Sbjct: 400 DQLLQILVN 408 >gi|227112521|ref|ZP_03826177.1| flagellar hook protein FlgE [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 400 Score = 72.6 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 56/133 (42%), Gaps = 7/133 (5%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 F+ ++ A L + +N++N+ TVGF++ V F+++ + V Sbjct: 2 GFSQAVSGLNAASNNLDVIGNNIANSATVGFKSGTVTFADMFA-----GSKVGMGVKVAS 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ S+ +LD A+ G ++ ++ +R+G+F + ++V+A G Sbjct: 57 VLQDFGNGTVTSSSRDLDIAISGGGFYRLQDTNGSTYYSRNGQFMLNGR-NIVNAQGMQL 115 Query: 123 VLDMASVPIQIPQ 135 + + Q Sbjct: 116 TGYPVAGTPPVVQ 128 Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 17/123 (13%), Positives = 34/123 (27%), Gaps = 5/123 (4%) Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 P + + E + + + + + L S +G ++ S Sbjct: 276 PTQNGFAPGSLTGFAINDDGTIEGSYSNGQKQPLGQILLASFANPEGLSPEGDNAWSETA 335 Query: 182 PPTPLEDLSGVTVKRGFL-----EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 T G L E SN + E+ MI + + S I + + Sbjct: 336 SSGQAVVGLAGTGSLGKLIGKSTESSNVDLSKELVNMIVAQRNYQSNAQTIKTQDSILQT 395 Query: 237 AIR 239 + Sbjct: 396 LVS 398 >gi|28900122|ref|NP_799777.1| flagellar hook protein FlgE [Vibrio parahaemolyticus RIMD 2210633] gi|153837072|ref|ZP_01989739.1| flagellar hook protein FlgE [Vibrio parahaemolyticus AQ3810] gi|260365772|ref|ZP_05778268.1| flagellar hook protein FlgE [Vibrio parahaemolyticus K5030] gi|260880694|ref|ZP_05893049.1| flagellar hook protein FlgE [Vibrio parahaemolyticus AN-5034] gi|260897700|ref|ZP_05906196.1| flagellar hook protein FlgE [Vibrio parahaemolyticus Peru-466] gi|260899389|ref|ZP_05907784.1| flagellar hook protein FlgE [Vibrio parahaemolyticus AQ4037] gi|28808405|dbj|BAC61610.1| LfgE [Vibrio parahaemolyticus RIMD 2210633] gi|149749660|gb|EDM60405.1| flagellar hook protein FlgE [Vibrio parahaemolyticus AQ3810] gi|308086228|gb|EFO35923.1| flagellar hook protein FlgE [Vibrio parahaemolyticus Peru-466] gi|308092098|gb|EFO41793.1| flagellar hook protein FlgE [Vibrio parahaemolyticus AN-5034] gi|308109176|gb|EFO46716.1| flagellar hook protein FlgE [Vibrio parahaemolyticus AQ4037] gi|308114990|gb|EFO52530.1| flagellar hook protein FlgE [Vibrio parahaemolyticus K5030] gi|328470101|gb|EGF41012.1| flagellar hook protein FlgE [Vibrio parahaemolyticus 10329] Length = 398 Score = 72.6 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 29/132 (21%), Positives = 51/132 (38%), Gaps = 6/132 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SFNI L+ A L+T++ N++N T GF+ + +F+ V + Q + Sbjct: 2 SFNIALSGLDATNTELNTISHNIANASTYGFKGARTEFAAVY-----NGMQPGGVEVASI 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASGKYP 122 + GS TG +D A+ G +F + + TR G F + + +G Sbjct: 57 SQNFDKNGSITGTGRSMDLAINGSGFFVTKDHMGQTLYTRSGVFGTDKSNFVTANNGAKL 116 Query: 123 VLDMASVPIQIP 134 + Sbjct: 117 QGYSVDSNNNLM 128 Score = 68.7 bits (166), Expect = 6e-10, Method: Composition-based stats. Identities = 16/134 (11%), Positives = 43/134 (32%), Gaps = 9/134 (6%) Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172 VS + +++ ++ G+ +G+V+ L +QG + Sbjct: 269 FGVSTNSPNGYTSGELAGVRVEDNGMVYATYTNGQSQLQGQVV----LADFANTQGLAKV 324 Query: 173 ENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 + + + + + G LE SN + E+ ++ + + + I Sbjct: 325 SGTAWTQSFSSGAPIMGVPGSGTLGNLTPGALEGSNVDLTSELVALMTAQRNYQANAKTI 384 Query: 228 DENEKSMLEAIRNI 241 ++K + Sbjct: 385 STSDKLTQALFNAV 398 >gi|110677963|ref|YP_680970.1| flagellar hook protein FlgE, putative [Roseobacter denitrificans OCh 114] gi|109454079|gb|ABG30284.1| flagellar hook protein FlgE, putative [Roseobacter denitrificans OCh 114] Length = 436 Score = 72.6 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 15/123 (12%), Positives = 39/123 (31%), Gaps = 5/123 (4%) Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 D +++ + + + + + I + L +V G ++ P+ Sbjct: 311 VTKDGSAIGNFVGVDVDPNGFVRASFDTGEIRTIYQIPLINVPNPNGLQAFDSQTYLPSR 370 Query: 182 PP-----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 D + E+S + E+ MI + ++S +I ++ + E Sbjct: 371 QSGAFFLWNAGDGPTGDIVSFAREESTTDVAGELTDMIKTQRAYSSNAKVIQTVDEMLQE 430 Query: 237 AIR 239 Sbjct: 431 TTN 433 Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 38/165 (23%), Positives = 66/165 (40%), Gaps = 10/165 (6%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 +S N G+A QRL++++DN++N+ T G++ ++ F +V + V + Sbjct: 5 SSLNAGVAGLQTNSQRLASISDNIANSSTFGYKRVQTDFESMVLSSGG-GAYAAGGVRAN 63 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI---------ILTRDGRFKVTDDGS 113 + L E G+ +ST D A+ G + + LT G F+ DG Sbjct: 64 TQRLIDERGTLVSTSNSTDLAVRGGGMLPVAQAAQVQTAGTDAPMFLTTTGSFRPDADGY 123 Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158 L S SG + A+ IP G + G++ Sbjct: 124 LTSQSGLVLMGWPAAADGSIPVYPRDTADGLEPIRIATGQLAGNP 168 >gi|283834455|ref|ZP_06354196.1| flagellar hook protein FlgE [Citrobacter youngae ATCC 29220] gi|291070002|gb|EFE08111.1| flagellar hook protein FlgE [Citrobacter youngae ATCC 29220] Length = 400 Score = 72.6 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 36/146 (24%), Positives = 64/146 (43%), Gaps = 6/146 (4%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66 I A+ ++L +++N++N+ TVG++++ +FS + Q + +G Sbjct: 5 IAATGLNAVNEQLDGISNNIANSGTVGYKSMTTQFSAMYA-----GTQAMGVSVAGSAQS 59 Query: 67 SKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125 GS +STG LD A+ D +F + +S I TR G F +G +V+ASG Y Sbjct: 60 ISTGGSMVSTGNALDLAINDDGFFVMCDSAGNISYTRAGSFVTDKNGYIVNASGDYLQGY 119 Query: 126 MASVPIQIPQKDEIFNVGEKGEISQK 151 + + G I + Sbjct: 120 PVDDSGTLQTGTVTDIQIKTGNIPAQ 145 Score = 68.7 bits (166), Expect = 6e-10, Method: Composition-based stats. Identities = 25/194 (12%), Positives = 57/194 (29%), Gaps = 10/194 (5%) Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD-GRFKVTDDG 112 Q + + + +TG D F + I +T D Sbjct: 211 QYTFDGEAQSGVPATTLTFDPNTGKLTDPTTPQTITFTTDEAAPISMTVDYSDCTQYGSD 270 Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172 V+ + +Q+ +++ GE +G+V+ L + G Sbjct: 271 FSVTTNSATGYASATQNGVQVDDDGKVYATYSNGERMLQGQVV----LATFPDENGLQAV 326 Query: 173 ENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 + + T+ G LE SN + E+ ++ + + + T +I Sbjct: 327 SGTAWVQTGESGTPLIGTPGSGSCGTLSSGMLESSNVDITNELVNLMTAQRNYQANTKVI 386 Query: 228 DENEKSMLEAIRNI 241 + + + + Sbjct: 387 STSTQLDQALFQAM 400 >gi|242280400|ref|YP_002992529.1| hypothetical protein Desal_2938 [Desulfovibrio salexigens DSM 2638] gi|242123294|gb|ACS80990.1| protein of unknown function DUF1078 domain protein [Desulfovibrio salexigens DSM 2638] Length = 528 Score = 72.2 bits (175), Expect = 5e-11, Method: Composition-based stats. Identities = 31/208 (14%), Positives = 60/208 (28%), Gaps = 16/208 (7%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN------------ 50 +S + L + N++N +T +++ + Sbjct: 4 SSMYTAATGVKSHGVLLQQIGANLANVNTTAYKSGDTFLETLASQSSGKANSGIVSGGIS 63 Query: 51 DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI--ILTRDGRFKV 108 Q ++ + GSF +T + D A+ G +F + P TR G F Sbjct: 64 TPGQIGLGTRVATTRINFKEGSFETTNSSTDIAIGGQGFFRVADPVSNASRYTRAGSFHF 123 Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 +G LV + I + + K E G I + Sbjct: 124 DKNGQLVDSHKNILQGYKIDDDGNIGSTSQNIVLPMKEETDTYGNKIMVVKSDPKGTDS- 182 Query: 169 FVRRENSGISPNIPPTPLEDLSGVTVKR 196 V + S + + ED ++ + Sbjct: 183 -VTMRTNLDSGAVDNSSSEDSPFFSLLQ 209 Score = 71.8 bits (174), Expect = 9e-11, Method: Composition-based stats. Identities = 18/122 (14%), Positives = 33/122 (27%), Gaps = 5/122 (4%) Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 D + + + + LY+ G R ++ S I Sbjct: 403 QSQDGFGEGYLQNVSFSPDGIMSALFSNGMSAELYQVNLYNFKNEFGLRREGSNYFSATI 462 Query: 182 PPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 +V LE SN + E MI + F + + I + + Sbjct: 463 DSGEAIQGVARKDGLGSVVSNSLETSNVDLADEFAYMILTQRGFQANSKGITTTDSMINT 522 Query: 237 AI 238 A+ Sbjct: 523 AL 524 >gi|91224199|ref|ZP_01259462.1| flagellar hook protein E [Vibrio alginolyticus 12G01] gi|269965644|ref|ZP_06179757.1| Flagellar hook protein flgE [Vibrio alginolyticus 40B] gi|91191110|gb|EAS77376.1| flagellar hook protein E [Vibrio alginolyticus 12G01] gi|269829712|gb|EEZ83948.1| Flagellar hook protein flgE [Vibrio alginolyticus 40B] Length = 398 Score = 72.2 bits (175), Expect = 6e-11, Method: Composition-based stats. Identities = 32/132 (24%), Positives = 53/132 (40%), Gaps = 6/132 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SFNI L+ A L+T++ N++N T GF+ + +FS V + Q + Sbjct: 2 SFNIALSGLDATNTELNTISHNIANASTYGFKGGRTEFSAVY-----NGMQPGGVEVASI 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLVSASGKYP 122 + GS TG +D A+ G +F + G + TR G F + + + SG Sbjct: 57 SQNFDKDGSITGTGRAMDLAINGGGFFVTKDNMGQMLYTRSGVFSTDKNNFVTANSGAKL 116 Query: 123 VLDMASVPIQIP 134 + Sbjct: 117 QGYSVDSNNNLM 128 Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 16/134 (11%), Positives = 43/134 (32%), Gaps = 9/134 (6%) Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172 VS + +++ ++ G+ +G+V+ L +QG + Sbjct: 269 FGVSTNSPNGYTSGELAGVRVEGNGMVYATYTNGQSQLQGQVV----LADFANTQGLAKV 324 Query: 173 ENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 + + + + + G LE SN + E+ ++ + + + I Sbjct: 325 SGTSWTQSFSSGAPIMGVPGSGTMGDLTPGALEGSNVDLTSELVALMTAQRNYQANAKTI 384 Query: 228 DENEKSMLEAIRNI 241 ++K + Sbjct: 385 STSDKLTQALFNAV 398 >gi|209521589|ref|ZP_03270287.1| flagellar basal body FlaE domain protein [Burkholderia sp. H160] gi|209497972|gb|EDZ98129.1| flagellar basal body FlaE domain protein [Burkholderia sp. H160] Length = 502 Score = 72.2 bits (175), Expect = 6e-11, Method: Composition-based stats. Identities = 28/177 (15%), Positives = 65/177 (36%), Gaps = 2/177 (1%) Query: 19 LSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGKEYLSKEVGSFIST 76 L + +N++N +TVGF++ +F+++ Q + G+ +T Sbjct: 17 LDVIGNNIANANTVGFKSGTAEFADMYANSVATATSQQIGIGTQLSEVQQQFSQGTITTT 76 Query: 77 GTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQK 136 L+ A+ G+ +F + + + +R+G F++ +G + +A G + A+ I Sbjct: 77 NQALNVAINGNGFFQMSNNGTLTYSRNGVFQLDKNGFITNAEGLDLMGYAANSSGIINTA 136 Query: 137 DEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT 193 + I+ + T GL + + + +T Sbjct: 137 QTVPLTVPTANIAPQATTKITAGLNLNAQDNIMLGTPTVTAGATNTGSLTTTGATIT 193 Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 12/98 (12%), Positives = 32/98 (32%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLED 201 + + + + L + G V N+ + + + ++ G +E+ Sbjct: 404 YSNGQTAALGQIVLANFSNQNGLVDLGNNEYGQTAASGVAQISTPGSTNHGVLQGGAVEN 463 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ +I + + + I + I Sbjct: 464 SNVDLTSELVNLITAQRNYQANAQTIKTQQAVDQTLIN 501 >gi|115523522|ref|YP_780433.1| flagellar basal body FlaE domain-containing protein [Rhodopseudomonas palustris BisA53] gi|115517469|gb|ABJ05453.1| flagellar basal body FlaE domain protein [Rhodopseudomonas palustris BisA53] Length = 602 Score = 72.2 bits (175), Expect = 6e-11, Method: Composition-based stats. Identities = 27/132 (20%), Positives = 49/132 (37%), Gaps = 12/132 (9%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + +A A L ++ N++N+ T F+ I F +++ + Q V Sbjct: 6 ALTTSVAGLRANSYALENISGNIANSQTTAFKRIDSSFLDLIPQTGVN-QQLAGSVTFAS 64 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRG-----------IILTRDGRFKVTDDG 112 + GS + A+ GD +F ++ P TR G F + +G Sbjct: 65 RSTNTVQGSVSAASVSTFMAINGDGFFVVQKPGSFADNNPIFDGVNRYTRRGDFSLDKNG 124 Query: 113 SLVSASGKYPVL 124 LV+ +G Y Sbjct: 125 YLVNGAGYYVQG 136 Score = 69.1 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 13/85 (15%), Positives = 31/85 (36%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMI 214 +A + + + + + R + G T+ LE SN + E ++I Sbjct: 515 LAEISIATFNGANFLKRTDGGVFEATNESGEALYGKGGTISGSSLEASNTDIADEFTKLI 574 Query: 215 HLTQKFNSITTLIDENEKSMLEAIR 239 Q +++ T +I + + + Sbjct: 575 VTQQAYSANTKVITTANTMVQDLLN 599 >gi|316932790|ref|YP_004107772.1| flagellar hook-basal body protein [Rhodopseudomonas palustris DX-1] gi|315600504|gb|ADU43039.1| flagellar hook-basal body protein [Rhodopseudomonas palustris DX-1] Length = 616 Score = 72.2 bits (175), Expect = 6e-11, Method: Composition-based stats. Identities = 28/137 (20%), Positives = 51/137 (37%), Gaps = 12/137 (8%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + +A A L ++ N++N+ T F+ I F +++ N+ Q V + Sbjct: 6 ALTTSVAGLRANSYALENISGNIANSQTTAFKRIDTSFLDLIPQTGNN-QQLAGSVNAES 64 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRG-----------IILTRDGRFKVTDDG 112 + GS S A+ G+ +F ++ P TR G F + +G Sbjct: 65 RLTNTLTGSVQSAAVSTYMAINGEGFFVVQKPASFTDNNPIFAGVNNYTRRGDFSLDKNG 124 Query: 113 SLVSASGKYPVLDMASV 129 LV+ +G Y Sbjct: 125 YLVNGAGYYLQGVPIDP 141 Score = 69.5 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 13/120 (10%), Positives = 36/120 (30%) Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 D + + + + +A + + + + + R + Sbjct: 494 NQLKQDGYAAGQLVSVSVSNQGRVVGSYSNGRNIDLAEVSVATFNGANFLKRIDGGAFET 553 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G ++ LE SN + E ++I Q +++ T +I + + + Sbjct: 554 TNESGEALFGKGGSISGASLESSNTDIADEFTKLIVTQQAYSANTKVITTANTMVQDLLN 613 >gi|114765247|ref|ZP_01444379.1| putative flagellar hook protein [Pelagibaca bermudensis HTCC2601] gi|114542382|gb|EAU45410.1| putative flagellar hook protein [Roseovarius sp. HTCC2601] Length = 433 Score = 72.2 bits (175), Expect = 6e-11, Method: Composition-based stats. Identities = 24/203 (11%), Positives = 58/203 (28%), Gaps = 8/203 (3%) Query: 45 VGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDG 104 G + + + Y V + G D A ++T Sbjct: 228 YGTVTMSFNDTGENAGAPAAYGDVTVTAAAPAGFAFDPATGEMTLTIDNGTEPQVVTMAL 287 Query: 105 RFKVTDDGSLVSASGKYPV---LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLY 161 + +G + P+ + + + + F + K + ++ L Sbjct: 288 GAPGSFEGLTQFSGDYTPMTVRPNGSESGTLTRVEFDEFGDVWGVFDNGTRKALYSIPLA 347 Query: 162 SVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 + G NS + T+ G +E +N + E+ +I Sbjct: 348 TFANPNGLETSNNSTFHTSNTSGSYYLGQPGTGETGTMTSGGVESANVDIAEELTSLIQR 407 Query: 217 TQKFNSITTLIDENEKSMLEAIR 239 + ++S +I ++ + E + Sbjct: 408 QRAYSSNAKIITTADEMLNETVN 430 Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 34/162 (20%), Positives = 66/162 (40%), Gaps = 10/162 (6%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV-GAIKNDIDQKISFVAS 61 + G++ +A + + ++ N++N DTVG+R FS++V + + VA+ Sbjct: 5 NAMASGVSGLMANSKAVEKISYNIANADTVGYRRS---FSQMVTSGSTSASGSFSTGVAT 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL------TRDGRFKVTDDGSLV 115 + + GSF+ T + + G +F + S TR G F+ +DG+LV Sbjct: 62 EVTHSNTAEGSFMDTSVNSNLTITGSGFFVVNSNIDASYTAGNMFTRVGSFEPDEDGNLV 121 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157 +A+G Y + + D + + T Sbjct: 122 NAAGLYLMGFGYGDDGTLGAVDRASFNDLEPVNIANQTISGT 163 >gi|307731363|ref|YP_003908587.1| fagellar hook-basal body protein [Burkholderia sp. CCGE1003] gi|307585898|gb|ADN59296.1| fagellar hook-basal body protein [Burkholderia sp. CCGE1003] Length = 502 Score = 72.2 bits (175), Expect = 6e-11, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 68/182 (37%), Gaps = 3/182 (1%) Query: 19 LSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--IDQKISFVASGKEYLSKEVGSFIST 76 L + +N++N +TVGF++ +F+++ +Q + G+ ST Sbjct: 17 LDVIGNNIANANTVGFKSGAAQFADMYANSVATAVGNQVGIGTKLSEVQQQFSQGTITST 76 Query: 77 GTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQK 136 LD A+ G+ +F L + ++ +R+G F++ +G + +A G + A+ I Sbjct: 77 NQALDVAINGNGFFQLSNNGSLVYSRNGVFQLDKNGFITNAQGLQLMGYAANSSGIINTA 136 Query: 137 DEIFNVGEKGEISQKGKVIATMGLY-SVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVK 195 + I+ K + GL + + + N + Sbjct: 137 QTVPLSVPTANIAPKATTNISAGLNLNAQDPLMLGTPSVTANASNTGTLTTPGATITNTA 196 Query: 196 RG 197 G Sbjct: 197 SG 198 Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 13/125 (10%), Positives = 35/125 (28%), Gaps = 5/125 (4%) Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 D + +Q+ + + L + G V N+ Sbjct: 377 NSLQPDGYAAGTLTSFTIGADGTLTGNYSNQQTAALGQIALANFSNQNGLVNLGNNVFQQ 436 Query: 180 NIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 + + + ++ G +E+SN + ++ +I + + + I + Sbjct: 437 TSQSGVAQISAPGSTNHGVLQGGAVENSNVDLTSQLVDLITAQRNYQANAQTIKTQQTVD 496 Query: 235 LEAIR 239 I Sbjct: 497 QTLIN 501 >gi|260222468|emb|CBA32062.1| hypothetical protein Csp_D30240 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 104 Score = 72.2 bits (175), Expect = 6e-11, Method: Composition-based stats. Identities = 13/89 (14%), Positives = 26/89 (29%), Gaps = 5/89 (5%) Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEM 210 + + QG + S + G LEDSN + E+ Sbjct: 14 GQLLVADFRNVQGLTQIAGGNWIETSASGQPVLGSPGEGKFGKTRSGALEDSNVDLTGEL 73 Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAIR 239 M+ + + + I ++ M + Sbjct: 74 VNMMTAQRNYQANAQTIKTQDQIMSTLVN 102 >gi|255605341|ref|XP_002538377.1| Flagellar L-ring protein precursor, putative [Ricinus communis] gi|223512459|gb|EEF24006.1| Flagellar L-ring protein precursor, putative [Ricinus communis] Length = 334 Score = 72.2 bits (175), Expect = 6e-11, Method: Composition-based stats. Identities = 13/82 (15%), Positives = 28/82 (34%), Gaps = 5/82 (6%) Query: 145 KGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS-----GVTVKRGFL 199 + I + + S G ++ + + + T+++G L Sbjct: 24 QMPNQTDLTQIGQIQVASFPNPAGLQAVGDNYLIETPASGTVALGNAGIDGRGTIRQGML 83 Query: 200 EDSNANSMYEMGQMIHLTQKFN 221 E SN N + E+ MI + + Sbjct: 84 EGSNVNVVEELVDMIETQRAYE 105 >gi|218461124|ref|ZP_03501215.1| flagellar hook protein FlgE [Rhizobium etli Kim 5] Length = 91 Score = 71.8 bits (174), Expect = 7e-11, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 30/87 (34%), Gaps = 1/87 (1%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQ 212 + + + G V N + P + T+K G LE SN + E+ + Sbjct: 3 PLANVASPDKLTLMSGNVYSANGQSGVTVTGFPQTNG-LGTIKSGALEGSNVDLAGELTE 61 Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIR 239 MI + + + + + M + Sbjct: 62 MIESQRSYTANSKVFQTGSDIMDVLVN 88 >gi|296157456|ref|ZP_06840291.1| fagellar hook-basal body protein [Burkholderia sp. Ch1-1] gi|295892228|gb|EFG72011.1| fagellar hook-basal body protein [Burkholderia sp. Ch1-1] Length = 503 Score = 71.8 bits (174), Expect = 7e-11, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 55/124 (44%), Gaps = 2/124 (1%) Query: 19 LSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--IDQKISFVASGKEYLSKEVGSFIST 76 L + +N++N +TVGF++ +F+++ +Q G+ ST Sbjct: 17 LDVIGNNIANANTVGFKSGAAQFADMYANSVATAVGNQIGIGTKLADVQQQFSQGTITST 76 Query: 77 GTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQK 136 LD A+ G+ +F L + ++ +R+G F++ +G + +A G + A+ I Sbjct: 77 NQALDVAINGNGFFQLSNNGSLVYSRNGVFQLDKNGFITNAQGLQLMGYAANSSGIINTA 136 Query: 137 DEIF 140 + Sbjct: 137 QTVP 140 Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 14/125 (11%), Positives = 35/125 (28%), Gaps = 5/125 (4%) Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 D + +Q+ + + L + G V N+ Sbjct: 378 NSLQPDGYAAGTLTSFTIGADGTLTGNYSNQQTAALGQIVLANFSNQNGLVNLGNNEFQQ 437 Query: 180 NIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 + + + ++ G +E+SN + E+ +I + + + I + Sbjct: 438 TSQSGVAQISAPGSTNHGVLQGGAVENSNVDLTSELVDLITAQRNYQANAQTIKTQQTVD 497 Query: 235 LEAIR 239 I Sbjct: 498 QTLIN 502 >gi|126734127|ref|ZP_01749874.1| flagellar hook protein FlgE, putative [Roseobacter sp. CCS2] gi|126716993|gb|EBA13857.1| flagellar hook protein FlgE, putative [Roseobacter sp. CCS2] Length = 444 Score = 71.8 bits (174), Expect = 7e-11, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 62/181 (34%), Gaps = 11/181 (6%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 +S N +A A RL+T++DN+SN+ T G++ F +V V + Sbjct: 5 SSLNASVAGLAANATRLATISDNISNSSTYGYKRAVTDFQSMVIESGQGTYSAG-GVRTT 63 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESP---------RGIILTRDGRFKVTDDGS 113 L E G+ +ST D A+ G + S + LT G F+ G Sbjct: 64 TSRLIDERGALVSTSNPTDLAVRGRGMLPVTSETSVTVDNGDNPLFLTTTGSFRPDAQGY 123 Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRE 173 L S G +L + + ++ + A VD+S Sbjct: 124 LRSP-GGLVLLGVPAAADGTIPNYPRDSIDGLVPVQINANQFAGEATTRVDLSVNLPATS 182 Query: 174 N 174 Sbjct: 183 T 183 Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 12/93 (12%), Positives = 29/93 (31%), Gaps = 5/93 (5%) Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLEDSNANS 206 +V+ + L V G + D + E+S + Sbjct: 349 NRVLYQIPLVDVPNVNGLETLDQQSYRVTPDSGSFFLWDAGDGPTGDIVGFAREESATDV 408 Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E+ ++I + ++S +I ++ + E Sbjct: 409 AGELTELIQTQRAYSSNAKVIQTVDEMLQETTN 441 >gi|114762177|ref|ZP_01441645.1| flagellar hook protein FlgE, putative [Pelagibaca bermudensis HTCC2601] gi|114545201|gb|EAU48204.1| flagellar hook protein FlgE, putative [Roseovarius sp. HTCC2601] Length = 432 Score = 71.8 bits (174), Expect = 7e-11, Method: Composition-based stats. Identities = 36/148 (24%), Positives = 66/148 (44%), Gaps = 8/148 (5%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 +S N G++ RLS ++DN++N+ T G+R ++ F+ +V + + A Sbjct: 5 SSLNAGVSGLAGNASRLSAISDNIANSSTYGYRRVETDFTALVMSSGSQRAYTAGGTAID 64 Query: 63 KEYLSKEVGSFISTGTELDFALEG--------DAWFALESPRGIILTRDGRFKVTDDGSL 114 L E G+ +ST D A++G A + ++LT G F++ ++G L Sbjct: 65 NLRLIDEGGAIVSTSNATDLAVDGIGMLPVASQAQYEATGEPELLLTSTGSFRIDENGYL 124 Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNV 142 S +G Y + A++ IP Sbjct: 125 ASENGYYLMGWPAALDGSIPPYPRDTIN 152 Score = 67.6 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 19/120 (15%), Positives = 43/120 (35%), Gaps = 5/120 (4%) Query: 125 DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP- 183 D +SV + + + S + +V+ + L + G + + S P+ Sbjct: 310 DGSSVGNMVSVEVDENGYVSALYDSGQSQVLYQIPLVDLPNYNGMIAVDGSTFRPSPESG 369 Query: 184 ----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 D +VK ++S + E+ MI + ++S +I ++ + E Sbjct: 370 SFFLWDAGDGPTGSVKSYARQESATDIAQELTDMIRTQRAYSSNAKVIQTVDEMLQETTN 429 >gi|32265682|ref|NP_859714.1| flagellar hook protein FlgE [Helicobacter hepaticus ATCC 51449] gi|32261730|gb|AAP76780.1| flagellar hook protein FlgE [Helicobacter hepaticus ATCC 51449] Length = 745 Score = 71.8 bits (174), Expect = 7e-11, Method: Composition-based stats. Identities = 29/150 (19%), Positives = 54/150 (36%), Gaps = 22/150 (14%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI-------D 53 M + + + L ++++N++N +T+G+R +F + + + + Sbjct: 1 MNGTLVNSYSGIKTHQFGLDSISNNIANVNTIGYRENIPQFETLFANNMDFLNADSPINN 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA---------------LESPRGI 98 +S GS+ +T E + A EG WF E + Sbjct: 61 DMNYGATKSSNAISTRSGSYKATDGEFNVAYEGKGWFIVGEQKSGSFEIKDDGYEKKQKN 120 Query: 99 ILTRDGRFKVTDDGSLVSASGKYPVLDMAS 128 TRDG F +G +V+ SG Y Sbjct: 121 YFTRDGSFLRDGEGYIVNTSGYYMYGVDLG 150 Score = 65.3 bits (157), Expect = 7e-09, Method: Composition-based stats. Identities = 16/102 (15%), Positives = 38/102 (37%), Gaps = 15/102 (14%) Query: 153 KVIATMGLYSVDMSQGFVRRENS----------GISPNIPPTPLEDLSGVTVKRGF---- 198 + + +G+ + QG + + G + I P+ G+ +K G Sbjct: 641 EPMGRIGIAAFVNDQGLRKVGGNLFEMTEMVVNGNANTISGRPILGWEGLNLKYGSVLYK 700 Query: 199 -LEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 LE SN + + ++I + + ++ + + EA+ Sbjct: 701 HLETSNVDVGNALTELIVMQRGYSMNARAFTTGDDLIKEALN 742 >gi|253688972|ref|YP_003018162.1| hypothetical protein PC1_2595 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251755550|gb|ACT13626.1| protein of unknown function DUF1078 domain protein [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 405 Score = 71.8 bits (174), Expect = 8e-11, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 53/132 (40%), Gaps = 5/132 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 F+ ++ A L + +N++N+ TVGF++ V F+++ + V Sbjct: 2 GFSQAVSGLNAASNNLDVIGNNIANSATVGFKSGTVTFADMFA-----GSKVGMGVKVAS 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPV 123 G+ S+ +LD A+ G ++ L+ G + + + ++V+A G Sbjct: 57 VLQDFGNGTVTSSSRDLDIAISGGGFYRLQDTNGSVYYSRNGQFMLNGRNIVNAQGMQLT 116 Query: 124 LDMASVPIQIPQ 135 + + Q Sbjct: 117 GYPVAGTPPVVQ 128 Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 12/123 (9%), Positives = 30/123 (24%), Gaps = 5/123 (4%) Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 P + + + + + + L +G ++ S Sbjct: 281 PTQNGFGPGSLTGYAINDDGTIVGSYSNGQKQALGQILLAGFANPEGLSPEGDNAWSETA 340 Query: 182 PPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + + E SN + E+ MI + + S I + + Sbjct: 341 SSGQAVVGLAGSGNLGKLVGKSTEMSNVDLSKELVNMIVAQRNYQSNAQTIKTQDSILQT 400 Query: 237 AIR 239 + Sbjct: 401 LVS 403 >gi|254475161|ref|ZP_05088547.1| flagellar hook protein FlgE [Ruegeria sp. R11] gi|214029404|gb|EEB70239.1| flagellar hook protein FlgE [Ruegeria sp. R11] Length = 441 Score = 71.8 bits (174), Expect = 8e-11, Method: Composition-based stats. Identities = 34/143 (23%), Positives = 58/143 (40%), Gaps = 10/143 (6%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 +S N G++ A RL++++DN++N+ T G++ ++ F +V V + Sbjct: 12 SSLNAGVSGLTANASRLASISDNIANSSTAGYKRVQTDFHSMVMGSSGGTYSAG-GVRTT 70 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALE---------SPRGIILTRDGRFKVTDDGS 113 L E G +ST D A+ G + S ++LT F+ DG Sbjct: 71 NVRLIDERGPLVSTNNATDLAVRGRGMLPVTSMTEVEVGASNPQMMLTTTASFRTNADGL 130 Query: 114 LVSASGKYPVLDMASVPIQIPQK 136 L + SG + A IP Sbjct: 131 LATESGLVLMGWPAQSDGTIPPY 153 Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 12/98 (12%), Positives = 32/98 (32%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLED 201 + +V+ + L + G + + P+ + + E+ Sbjct: 341 YDTGVSRVVYQVPLVDLPNPNGMIAMDRQTYMPSSESGSYFLWNAGEGPTGDILGYAREE 400 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S + E+ MI + ++S +I ++ + E Sbjct: 401 SATDVAGELTNMIQTQRAYSSNAKVIQTVDEMLQETTN 438 >gi|288960286|ref|YP_003450626.1| flagellar hook protein [Azospirillum sp. B510] gi|288912594|dbj|BAI74082.1| flagellar hook protein [Azospirillum sp. B510] Length = 871 Score = 71.8 bits (174), Expect = 8e-11, Method: Composition-based stats. Identities = 13/100 (13%), Positives = 35/100 (35%), Gaps = 5/100 (5%) Query: 144 EKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGF 198 + + K+IA + + + + R + E V Sbjct: 768 MVNYDNGRSKMIARVPIITFNNPNALQRESGGVFLESEDAGKPNFNDPETNGAGAVVANS 827 Query: 199 LEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 +E SN + E +MI + +++ ++ +++ + E + Sbjct: 828 VESSNVDIADEFTKMIVTQRSYSANAKIVTTSDEMLQEVL 867 Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 33/233 (14%), Positives = 78/233 (33%), Gaps = 29/233 (12%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 S + A + L ++DN++N+ T+G++ + F +V + + V + Sbjct: 6 SMTTAVLGLNAQSKALGHISDNIANSSTIGYKRVDSAFETMVLQSSQRLHEPG-GVTAQP 64 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALE-------------------SPRGIILTRDG 104 +++ GS + + A++G +F++ + + TR G Sbjct: 65 VFMNSIQGSLTQVQSPTNIAIQGQGFFSVSKVNVQNSTSTLVQTQTGAVNSSSVYYTRAG 124 Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 F++ LV++SG + + +KD++ V I + ++ Sbjct: 125 DFELDKSRYLVNSSGYALNGWLVDPVTGVLKKDQVAPVQVSSLIDKPVATSTIDLEANLP 184 Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGF-------LE--DSNANSMY 208 + ++ P ++ LE SN + Sbjct: 185 ATPTPGKKVPDSSIPIFDSQGNPRTVNFKWRQQADSSWRMVLETPGSNTKPVD 237 >gi|187925761|ref|YP_001897403.1| hypothetical protein Bphyt_3791 [Burkholderia phytofirmans PsJN] gi|187716955|gb|ACD18179.1| protein of unknown function DUF1078 domain protein [Burkholderia phytofirmans PsJN] Length = 503 Score = 71.8 bits (174), Expect = 8e-11, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 56/124 (45%), Gaps = 2/124 (1%) Query: 19 LSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--IDQKISFVASGKEYLSKEVGSFIST 76 L + +N++N +TVGF++ +F+++ +Q + G+ ST Sbjct: 17 LDVIGNNIANANTVGFKSGAAQFADMYANSVATAVGNQVGIGTKLAEVQQQFSQGTITST 76 Query: 77 GTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQK 136 LD A+ G+ +F L + ++ +R+G F++ +G + +A G + A+ I Sbjct: 77 NQALDVAINGNGFFQLSNNGSMVYSRNGVFQLDKNGFITNAQGLQLMGYAANSSGIINTA 136 Query: 137 DEIF 140 + Sbjct: 137 QTVP 140 Score = 66.4 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 13/125 (10%), Positives = 34/125 (27%), Gaps = 5/125 (4%) Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 D +++ + + L + G V N+ Sbjct: 378 NSLQPDGYEAGTLTSFTIGADGTLTGNYSNRQTAALGQIALANFSNQNGLVNLGNNEFQQ 437 Query: 180 NIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 + + + ++ G +E+SN + E+ +I + + + I + Sbjct: 438 TSASGVAQISAPGSTNHGVLQGGAVENSNVDLTSELVNLITAQRNYQANAQTIKTQQTVD 497 Query: 235 LEAIR 239 I Sbjct: 498 QTLIN 502 >gi|254464969|ref|ZP_05078380.1| flagellar hook protein FlgE [Rhodobacterales bacterium Y4I] gi|206685877|gb|EDZ46359.1| flagellar hook protein FlgE [Rhodobacterales bacterium Y4I] Length = 435 Score = 71.8 bits (174), Expect = 8e-11, Method: Composition-based stats. Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 9/141 (6%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 +S N G++ A RL++++DN++N+ T G++ ++ F +V + V + Sbjct: 5 SSLNAGVSGLSANASRLASISDNIANSSTRGYKRVQTDFHSMVLSGSGGTYSAG-GVRTT 63 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALES--------PRGIILTRDGRFKVTDDGSL 114 L E G +ST D A+ G + S ++LT G F+ G L Sbjct: 64 NVRLIDERGPLVSTNNATDLAVRGRGMLPVASITEVEAGGSPSMMLTSTGSFRTDSSGYL 123 Query: 115 VSASGKYPVLDMASVPIQIPQ 135 + SG + A +P Sbjct: 124 STESGLVLMGWPAQADGTLPD 144 Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 18/125 (14%), Positives = 36/125 (28%), Gaps = 5/125 (4%) Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 D +V + + S KVI + L V G ++ P Sbjct: 308 GTTEKDGTAVGSFVSVEVNASGEVIASYDSGDTKVIYKVPLADVSNINGMQALDSQTYKP 367 Query: 180 NIPP-----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 + + E+S + E+ MI + ++S +I ++ + Sbjct: 368 TDDSGAFYLWDAGEGPTGEILGYAQEESAVDVATELTDMIKTQRAYSSNAKVIQTVDEML 427 Query: 235 LEAIR 239 E Sbjct: 428 QETTN 432 >gi|91791414|ref|YP_561065.1| flagellar basal body rod protein-like protein [Shewanella denitrificans OS217] gi|91713416|gb|ABE53342.1| Flagellar basal body rod protein-like protein [Shewanella denitrificans OS217] Length = 215 Score = 71.8 bits (174), Expect = 8e-11, Method: Composition-based stats. Identities = 40/232 (17%), Positives = 77/232 (33%), Gaps = 27/232 (11%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 Q L+T ++N++N +T G+ + F++V+ A Q S + Sbjct: 9 GINTQLQSLATTSNNVANANTPGYLR-QTSFTQVLDAQIQTQTQVSS---------KQLS 58 Query: 71 GSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVP 130 G+ TG DFA+ G + F +E + LT+DGRF + + G LV SG + + Sbjct: 59 GAIKQTGNVYDFAVLGKSLFVVELLGELRLTQDGRFHLNEAGDLVHISGAMAMTSEGPLA 118 Query: 131 IQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS 190 + + G N L Sbjct: 119 ANTETDQIAARLWTVSTSESYTNLQPAEM--------GLYLANWDDWKTNDDSKVLAQAL 170 Query: 191 GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 + E N+ ++ +M+ + + S+ + ++ I + Sbjct: 171 ------NYTEH---NATADVLEMMRIQRSVESLQKAYQTYDAAIGYGISELG 213 >gi|91785634|ref|YP_560840.1| putative flagellar hook protein FlgE [Burkholderia xenovorans LB400] gi|91689588|gb|ABE32788.1| putative flagellar hook protein FlgE [Burkholderia xenovorans LB400] Length = 503 Score = 71.8 bits (174), Expect = 8e-11, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 55/124 (44%), Gaps = 2/124 (1%) Query: 19 LSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--IDQKISFVASGKEYLSKEVGSFIST 76 L + +N++N +TVGF++ +F+++ +Q G+ ST Sbjct: 17 LDVIGNNIANANTVGFKSGAAQFADMYANSVATAVGNQIGIGTKLADVQQQFSQGTITST 76 Query: 77 GTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQK 136 LD A+ G+ +F L + ++ +R+G F++ +G + +A G + A+ I Sbjct: 77 NQALDVAINGNGFFQLSNNGSLVYSRNGVFQLDKNGFITNAQGLQLMGYAANSSGIINTA 136 Query: 137 DEIF 140 + Sbjct: 137 QTVP 140 Score = 65.7 bits (158), Expect = 5e-09, Method: Composition-based stats. Identities = 14/125 (11%), Positives = 35/125 (28%), Gaps = 5/125 (4%) Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 D + +Q+ + + L + G V N+ Sbjct: 378 NSLQPDGYAAGTLTSFTIGADGTLTGNYSNQQTAALGQIVLANFSNQNGLVNLGNNEFQQ 437 Query: 180 NIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 + + + ++ G +E+SN + E+ +I + + + I + Sbjct: 438 TSQSGVAQISAPGSTNHGVLQGGAVENSNVDLTSELVDLITAQRNYQANAQTIKTQQTVD 497 Query: 235 LEAIR 239 I Sbjct: 498 QTLIN 502 >gi|218678737|ref|ZP_03526634.1| flagellar hook protein FlgE [Rhizobium etli CIAT 894] Length = 112 Score = 71.8 bits (174), Expect = 9e-11, Method: Composition-based stats. Identities = 13/73 (17%), Positives = 27/73 (36%), Gaps = 1/73 (1%) Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 G V N + P + +++ G LE SN + E+ +MI + + + + + Sbjct: 38 SGNVYSANGQSGVTVTGFPQTNG-LGSIQSGALESSNVDLAGELTEMIEAQRSYTANSKV 96 Query: 227 IDENEKSMLEAIR 239 M + Sbjct: 97 FQTGSDIMDVLVN 109 >gi|227328338|ref|ZP_03832362.1| flagellar hook protein FlgE [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 400 Score = 71.4 bits (173), Expect = 9e-11, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 55/133 (41%), Gaps = 7/133 (5%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 F+ ++ A L + +N++N+ TVGF++ V F+++ + V Sbjct: 2 GFSQAVSGLNAASNNLDVIGNNIANSATVGFKSGTVTFADMFA-----GSKVGMGVKVAS 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ S+ +LD A+ G ++ ++ +R+G+F + ++V+A G Sbjct: 57 VLQDFGNGTVTSSSRDLDIAISGGGFYRLQDTNGSTYYSRNGQFMLNGR-NIVNAQGMQL 115 Query: 123 VLDMASVPIQIPQ 135 + Q Sbjct: 116 TGYPVAGTPPTVQ 128 Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 17/123 (13%), Positives = 34/123 (27%), Gaps = 5/123 (4%) Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 P + + E + + + + + L S +G ++ S Sbjct: 276 PTQNGFAPGSLTGFAINDDGTIEGNYSNGQKQALGQILLASFANPEGLSPEGDNAWSETA 335 Query: 182 PPTPLEDLSGVTVKRGFL-----EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 T G L E SN + E+ MI + + S I + + Sbjct: 336 SSGQAVVGLAGTGSLGKLIGKSTESSNVDLSKELVNMIVAQRNYQSNAQTIKTQDSILQT 395 Query: 237 AIR 239 + Sbjct: 396 LVS 398 >gi|84502376|ref|ZP_01000512.1| flagellar hook protein FlgE, putative [Oceanicola batsensis HTCC2597] gi|84389188|gb|EAQ01985.1| flagellar hook protein FlgE, putative [Oceanicola batsensis HTCC2597] Length = 422 Score = 71.4 bits (173), Expect = 9e-11, Method: Composition-based stats. Identities = 15/94 (15%), Positives = 37/94 (39%), Gaps = 5/94 (5%) Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNAN 205 + + + L +V G + +N+ + + + G +E SN + Sbjct: 326 MRRALYQIPLATVPNPNGLMTADNATFLVSEASGSFTLSMAGSGTAGEITGGSVESSNVD 385 Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E+ ++I + F+S +I ++ + E +R Sbjct: 386 IAEELTELIQKQRAFSSNAKIITTADEMLDETVR 419 Score = 56.8 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 32/155 (20%), Positives = 65/155 (41%), Gaps = 12/155 (7%) Query: 13 LALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV--GAIKNDIDQKISFVASGKEYLSKEV 70 +A + ++ ++ N++N+DT GFR F++++ GA S V + + + + Sbjct: 1 MANSKAVARISYNIANSDTYGFRRS---FAQMLTSGATIPTGTVSASGVRAEVVHQNTQD 57 Query: 71 GSFISTGTELDFALEGDAWFALESPRGI-------ILTRDGRFKVTDDGSLVSASGKYPV 123 G+ ++TG + A+ G+ +FA+ +TR G F+ +G L +ASG Y Sbjct: 58 GTPLTTGAATNLAISGNGFFAVTRNINEGTGEPEHFMTRAGDFQPDSEGYLRNASGMYLA 117 Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158 + D G + + + Sbjct: 118 GFPYDESGSLGVIDRNQFSGLQTVRIAEMSIAGNP 152 >gi|323492338|ref|ZP_08097491.1| flagellar hook protein FlgE [Vibrio brasiliensis LMG 20546] gi|323313385|gb|EGA66496.1| flagellar hook protein FlgE [Vibrio brasiliensis LMG 20546] Length = 398 Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 17/134 (12%), Positives = 42/134 (31%), Gaps = 9/134 (6%) Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172 VS + +++ ++ G+ +G+V+ L QG + Sbjct: 269 FGVSTNNPNGYTSGELAGVRVEDNGMVYATYTNGQSQLQGQVV----LADFANPQGLAKV 324 Query: 173 ENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 + + + + + G LE SN + E+ ++ + + + I Sbjct: 325 SGTAWTQSFSSGAPIMGVPGSGTLGDLTPGALEGSNVDLTSELVNLMTAQRNYQANAKTI 384 Query: 228 DENEKSMLEAIRNI 241 N+K + Sbjct: 385 STNDKLTQALFNAV 398 Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 31/131 (23%), Positives = 52/131 (39%), Gaps = 6/131 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SFNI L+ A L+T++ N++N T GF+ + +F+ V + Q + Sbjct: 2 SFNIALSGLDATNTELNTISHNIANASTYGFKGARTEFAAVY-----NGMQPGGVEVASI 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-ILTRDGRFKVTDDGSLVSASGKYP 122 + GS TG +D A+ G +F + G + TR G F D + +G Sbjct: 57 SQNFDKNGSVSGTGRAMDLAINGSGFFITKDTSGQLLYTRSGVFGTDKDNYVTGNTGAKL 116 Query: 123 VLDMASVPIQI 133 + Sbjct: 117 QGYSVDGNNNL 127 >gi|328543139|ref|YP_004303248.1| hypothetical protein SL003B_1520 [polymorphum gilvum SL003B-26A1] gi|326412884|gb|ADZ69947.1| Conserved domain protein [Polymorphum gilvum SL003B-26A1] Length = 361 Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 17/121 (14%), Positives = 45/121 (37%) Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 D + + + +Q+ + + + L + Q R + S + Sbjct: 241 LNQDGYAAGQVVGLSIDGAGRIIASYSNQQTRSLFEIPLATFQADQNLRRVDGSAFAATP 300 Query: 182 PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 +G T+ LE SNA+ E ++I Q +++ + ++ ++ + +A+ + Sbjct: 301 SSGKAAYGNGGTIVANALESSNADIAAEFSKLIITQQAYSANSKVVTSADQMLNDALNMV 360 Query: 242 A 242 Sbjct: 361 R 361 >gi|21672604|ref|NP_660671.1| flagellar hook protein FlgE [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|25008456|sp|Q8K9K6|FLGE_BUCAP RecName: Full=Flagellar hook protein flgE gi|21623235|gb|AAM67882.1| flagellar hook protein FlgE [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 409 Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 50/120 (41%), Gaps = 1/120 (0%) Query: 9 LAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSK 68 + + + V++N++N T+GF++ F ++V S V + Sbjct: 7 INGLMINNDYIDIVSNNIANASTIGFKSSTPSFFDIVSHSFYSNQIIKSGVGISNLVQNF 66 Query: 69 EVGSFISTGTELDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASGKYPVLDMA 127 G + T +LD + D +F + +G + TR+G F + + ++V+ G Y Sbjct: 67 SDGVLVQTNRDLDLGIVQDGFFRVLDSKGYVYYTRNGHFLLDKNKNIVNGQGMYLTGQNQ 126 Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 13/98 (13%), Positives = 30/98 (30%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLED 201 +++ + I + L + S S + ++ FLE Sbjct: 310 YTNEEEQKIGQIFLAKFINPEKLKPESGSIWSATHESGQEKIGAAGDQGFGSLYTKFLES 369 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ MI + + S ++ + + Sbjct: 370 SNVDLNKELINMIIAQRNYQSSAQAFKTEDRIINTLVN 407 >gi|289612565|emb|CBI60084.1| unnamed protein product [Sordaria macrospora] Length = 159 Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 29/126 (23%), Positives = 52/126 (41%), Gaps = 14/126 (11%) Query: 19 LSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------------QKISFVASGKEY 65 + +++N++N +T GF+ + F + I + V Sbjct: 1 MRVISNNLANVNTTGFKRDRASFEAMSYQIITAQGAASTQESRYATGLNLGTGVRIQGTA 60 Query: 66 LSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLVSASGKYPVL 124 + GS +TG LD A+EGD +F ++ P G + TR G F + +G LV+ G + Sbjct: 61 SIQTQGSLATTGNALDMAMEGDGYFQVQMPGGQLGYTRAGNFTRSAEGLLVTTEGYQVMP 120 Query: 125 DMASVP 130 + Sbjct: 121 GITLPE 126 >gi|126730121|ref|ZP_01745933.1| flagellar hook protein FlgE, putative [Sagittula stellata E-37] gi|126709501|gb|EBA08555.1| flagellar hook protein FlgE, putative [Sagittula stellata E-37] Length = 435 Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 34/142 (23%), Positives = 63/142 (44%), Gaps = 10/142 (7%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 +S N G+A A RL+T++DN++N+ T G++ ++ +FS +V N V + Sbjct: 5 SSLNAGVAGLSANATRLATISDNIANSATQGYKRVETEFSAMV-TSGNSGTYTAGGVRTQ 63 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALES---------PRGIILTRDGRFKVTDDGS 113 L E G+ ++T D A+ G + + + +T F++ +G Sbjct: 64 TNRLVAEHGALVTTNNATDLAVRGTGFLPVAQATEVLAGNGNPQMFMTTTASFRLDAEGY 123 Query: 114 LVSASGKYPVLDMASVPIQIPQ 135 L + SG + A+ IP Sbjct: 124 LRTESGLMLLGWRANADGSIPN 145 Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 31/98 (31%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLED 201 + VI + L V G + N P+ D + E+ Sbjct: 335 FDTGASAVIFQIPLVDVPNPNGMIALNNQLFQPSAESGSFFLWDAGDGPTGEIVPYAREE 394 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S + E+ MI + ++S +I ++ + E Sbjct: 395 STTDVAAELTDMIQTQRAYSSNAKVIQTVDEMLQETTN 432 >gi|50120639|ref|YP_049806.1| flagellar hook protein FlgE [Pectobacterium atrosepticum SCRI1043] gi|49611165|emb|CAG74611.1| flagellar hook protein [Pectobacterium atrosepticum SCRI1043] Length = 405 Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 55/133 (41%), Gaps = 7/133 (5%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 F+ ++ A L + +N++N+ TVGF++ V F+++ + V Sbjct: 2 GFSQAVSGLNAASNNLDVIGNNIANSATVGFKSGNVTFADMFA-----GSKVGMGVKVAS 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFA-LESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 G+ S+ +LD A+ G ++ ++ +R+G+F + ++V+A G Sbjct: 57 VLQDFGNGTVTSSSRDLDIAISGGGFYRLQDTNGSTYYSRNGQFMLNGR-NIVNAQGMQL 115 Query: 123 VLDMASVPIQIPQ 135 + Q Sbjct: 116 TGYPVAGTPPTVQ 128 Score = 68.0 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 17/123 (13%), Positives = 34/123 (27%), Gaps = 5/123 (4%) Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 P + + E + + + + + L S +G ++ S Sbjct: 281 PTQNGFAPGSLTGFAINDDGTIEGSYSNGQKQALGQILLASFANPEGLSPEGDNAWSETA 340 Query: 182 PPTPLEDLSGVTVKRGFL-----EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 T G L E SN + E+ MI + + S I + + Sbjct: 341 SSGQAVVGLAGTGSLGKLIGKSTESSNVDLSKELVSMIVAQRNYQSNAQTIKTQDSILQT 400 Query: 237 AIR 239 + Sbjct: 401 LVS 403 >gi|294675564|ref|YP_003576179.1| flagellar hook protein FlgE [Rhodobacter capsulatus SB 1003] gi|294474384|gb|ADE83772.1| flagellar hook protein FlgE [Rhodobacter capsulatus SB 1003] Length = 452 Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 36/164 (21%), Positives = 63/164 (38%), Gaps = 10/164 (6%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS-FVAS 61 +S N G+A A RL+T++DN++N+ T G++ F +V + V + Sbjct: 5 SSLNAGVAGLAANATRLATISDNIANSGTYGYKRATADFESMVLTQARSSGTYSAGGVRA 64 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALES---------PRGIILTRDGRFKVTDDG 112 L + GS I T +D A+ G + + + + + +T G F DG Sbjct: 65 SSGRLIDQRGSLIGTSNAMDIAISGRGFLPVANTSALANGLGDQPLTMTSTGSFHTDKDG 124 Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156 L + SG + A IP G + + + Sbjct: 125 VLRTDSGLVLLGWAALADGTIPVNARDTVTGLQPVVINANQTAG 168 Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats. Identities = 13/98 (13%), Positives = 30/98 (30%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLED 201 + + + + L V G +N + D V+ E Sbjct: 352 YDTGFIRTVYQVPLVDVSNINGLTALDNQTFQVSSTSGSFYLWDAGDGPTGAVEGYAREG 411 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S + E+ +I + ++S +I ++ + E Sbjct: 412 SAVDVAQELTNLIQTQRAYSSNAKVIQTVDEMLQETTN 449 >gi|207108617|ref|ZP_03242779.1| flagellar hook protein FlgE [Helicobacter pylori HPKX_438_CA4C1] Length = 294 Score = 71.1 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 14/128 (10%), Positives = 40/128 (31%), Gaps = 5/128 (3%) Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + + + + + V + + +A + L + G + Sbjct: 164 SETYAIEQNGYQAGDLMDVRFDSDGVLLGAFSNGRTLALAQVALANFANDAGLQALGGNV 223 Query: 177 ISPNIPPTPLEDLSGVTVKRGF-----LEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 S + T +RG LE SN + + +I + + F + + + ++ Sbjct: 224 FSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQRGFQANSKAVTTSD 283 Query: 232 KSMLEAIR 239 + + + Sbjct: 284 QILNTLLN 291 >gi|333008282|gb|EGK27756.1| flagellar basal-body rod protein flgG domain protein [Shigella flexneri K-272] gi|333019772|gb|EGK39044.1| flagellar basal-body rod protein flgG domain protein [Shigella flexneri K-227] Length = 82 Score = 71.1 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 9/80 (11%), Positives = 28/80 (35%), Gaps = 5/80 (6%) Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQK 219 G + + + + + +G++E SN N E+ MI + + Sbjct: 2 NDTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRA 61 Query: 220 FNSITTLIDENEKSMLEAIR 239 + + + ++ + + + Sbjct: 62 YEINSKAVSTTDQMLQKLTQ 81 >gi|89067517|ref|ZP_01155030.1| flagellar hook protein FlgE, putative [Oceanicola granulosus HTCC2516] gi|89047086|gb|EAR53140.1| flagellar hook protein FlgE, putative [Oceanicola granulosus HTCC2516] Length = 433 Score = 71.1 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 39/168 (23%), Positives = 62/168 (36%), Gaps = 10/168 (5%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 +S N +A A RL+T+ADN++N+ T G++ F +V V Sbjct: 5 SSLNASVAGLTANASRLATIADNIANSSTFGYKRATTDFHSMVLNTTEGTYSAG-GVRVT 63 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESP---------RGIILTRDGRFKVTDDGS 113 + L + GS +ST D A+ G + + +LT G F+V D G Sbjct: 64 TQRLIDQRGSIVSTDNVTDLAVRGRGMMPVSTEAALGTGNASSQFLLTSTGSFRVDDQGY 123 Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLY 161 L S SG + A + +P G + + Y Sbjct: 124 LASQSGLILMGWPAGIDGNVPAFPRDTADGLQPIRINANQSAGEATTY 171 Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats. Identities = 17/120 (14%), Positives = 35/120 (29%), Gaps = 5/120 (4%) Query: 125 DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP- 183 D +V + + KVI + L V G + Sbjct: 311 DGNAVGSMTSIDIDANGFMRAAFDTGISKVIYQIPLVDVSNVNGLETLDQQTYRATPESG 370 Query: 184 ----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 D + LE+S + E+ ++I + ++S +I ++ + E Sbjct: 371 SYFLWDAGDGPTGDLLSYALEESATDVAGELTELIQTQRAYSSNAKVIQTVDEMLQETTN 430 >gi|162147445|ref|YP_001601906.1| flagellar hook protein flgE [Gluconacetobacter diazotrophicus PAl 5] gi|209545555|ref|YP_002277784.1| hypothetical protein Gdia_3444 [Gluconacetobacter diazotrophicus PAl 5] gi|161786022|emb|CAP55604.1| putative flagellar hook protein flgE [Gluconacetobacter diazotrophicus PAl 5] gi|209533232|gb|ACI53169.1| protein of unknown function DUF1078 domain protein [Gluconacetobacter diazotrophicus PAl 5] Length = 569 Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 29/172 (16%), Positives = 56/172 (32%), Gaps = 15/172 (8%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 + + ++ A + +++N++N+ TVG++ F + V S Sbjct: 5 NALSTAVSGIDAQSTAFTNLSNNIANSQTVGYKAESTSFQDFVAGSLTSSTASSDISDSV 64 Query: 63 KEYLSKEVGSFISTGTELD---FALEGDAWFA------------LESPRGIILTRDGRFK 107 + VG+ + D A+ G+ F + TR+G F Sbjct: 65 AAVDVQNVGAQGTASASTDTLAMAINGNGLFDVSEETGQATSGTTQFENTQYYTRNGEFY 124 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG 159 ++G LV+ +G Y MA + NV + I Sbjct: 125 ENNEGYLVNTTGYYLDGYMADSNGSLGNTLTQINVANVSFRPTETTTITQSA 176 Score = 52.6 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 10/94 (10%), Positives = 32/94 (34%), Gaps = 5/94 (5%) Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNAN 205 ++I + L + G + + T++ G++E S + Sbjct: 472 DTQLIGKVALSTFANVDGLNAVTGQAYTATAASGAAQTGTVGSNGTGTLEVGYVESSTTD 531 Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 ++ +I + +++ T ++ + + I Sbjct: 532 LTSDLSALIVDQEAYSANTKVVTTADDLLQATIS 565 >gi|91976146|ref|YP_568805.1| hypothetical protein RPD_1667 [Rhodopseudomonas palustris BisB5] gi|91682602|gb|ABE38904.1| protein of unknown function DUF1078-like [Rhodopseudomonas palustris BisB5] Length = 610 Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 51/139 (36%), Gaps = 12/139 (8%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + +A A L ++ N++N+ T F+ + F +++ + Q V S Sbjct: 6 ALTTSVAGLRANSYALENISGNIANSQTTAFKRVDTAFLDLIPQAGTNA-QVAGSVTSES 64 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRG-----------IILTRDGRFKVTDDG 112 + GS S A+ G+ +FA++ P TR G F + +G Sbjct: 65 RLTNTLSGSVQSASVSTYMAINGEGFFAVQKPGSFSDNSPVFTGVNNYTRRGDFSLDKNG 124 Query: 113 SLVSASGKYPVLDMASVPI 131 LV+ +G Y Sbjct: 125 YLVNGAGYYLQGVAIDPTT 143 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 13/120 (10%), Positives = 35/120 (29%) Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 D + + + +A + + + + + R + Sbjct: 488 NQLQQDGYAAGQLTSVSVSNEGRVVGAYSNGRNIDLAEVSVATFNGANFLKRIDGGAFEV 547 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G ++ LE SN + E ++I Q +++ T +I + + + Sbjct: 548 TNESGEALYGKGGSISGSSLESSNTDIADEFTKLIVTQQAYSANTKVITTANTMVQDLLN 607 >gi|86750926|ref|YP_487422.1| hypothetical protein RPB_3817 [Rhodopseudomonas palustris HaA2] gi|86573954|gb|ABD08511.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2] Length = 598 Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 27/139 (19%), Positives = 51/139 (36%), Gaps = 12/139 (8%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + +A A L ++ N++N+ T F+ + F +++ + Q V + Sbjct: 6 ALTTSVAGLRANSYALENISGNIANSQTTAFKRVDTSFLDLIPQAGTN-QQLAGSVTAES 64 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRG-----------IILTRDGRFKVTDDG 112 + GS S A+ G+ +FA++ P TR G F + +G Sbjct: 65 RLTNTLSGSVQSASVSTYMAINGEGFFAVQKPGSFSDNSPVFTGVNNYTRRGDFSLDKNG 124 Query: 113 SLVSASGKYPVLDMASVPI 131 LV+ +G Y Sbjct: 125 YLVNGAGYYLQGVAIDPTT 143 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 13/120 (10%), Positives = 35/120 (29%) Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 D + + + +A + + + + + R + Sbjct: 476 NQLQQDGYAAGQLTSVSVSNEGRVVGSYSNGRNIDLAEVSVATFNGANFLKRIDGGAFEV 535 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G ++ LE SN + E ++I Q +++ T +I + + + Sbjct: 536 TNESGEALYGKGGSISGSSLESSNTDIADEFTKLIVTQQAYSANTKVITTANTMVQDLLN 595 >gi|126738557|ref|ZP_01754262.1| flagellar hook protein FlgE, putative [Roseobacter sp. SK209-2-6] gi|126720356|gb|EBA17062.1| flagellar hook protein FlgE, putative [Roseobacter sp. SK209-2-6] Length = 446 Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 61/165 (36%), Gaps = 10/165 (6%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 ++ N G++ A L+ ++DN++N+ T G++ I+ F +V K V Sbjct: 18 SALNAGVSGLSANASSLAAISDNIANSSTRGYKRIQTDFQSMVVGSKGGSYTAG-GVGFD 76 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFAL---------ESPRGIILTRDGRFKVTDDGS 113 K L E G + T D A+ G + ++LT G F+ DG Sbjct: 77 KLRLVDERGPLVGTNNATDLAVSGRGMLPVAALSEVESGNGNPTMMLTTTGSFRTNADGY 136 Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158 L +ASG + A+ + G + ++ Sbjct: 137 LTTASGLVLMGWPANANGTVDDGPRDTAEGLEPIQYNMNQLTGEP 181 Score = 69.5 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 19/120 (15%), Positives = 38/120 (31%), Gaps = 5/120 (4%) Query: 125 DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP- 183 D + V + + + S KVI + L + G + P+ Sbjct: 324 DGSEVGTMVGVEVDAQGYVRANYDSGASKVIYKVPLADMANPNGLKALDKQTYLPSSQSG 383 Query: 184 ----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 D V +E+S + E+ MI + ++S +I ++ + E Sbjct: 384 SYFLWDAGDGPTGEVASYSMEESATDVATELTDMIKTQRAYSSNAKVIQTVDEMLQETTN 443 >gi|283784085|ref|YP_003363950.1| lateral flagellar hook protein [Citrobacter rodentium ICC168] gi|282947539|emb|CBG87091.1| lateral flagellar hook protein [Citrobacter rodentium ICC168] Length = 400 Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 34/146 (23%), Positives = 61/146 (41%), Gaps = 6/146 (4%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66 I A+ ++L +++N++N TVG++++ FS + Q + +G Sbjct: 5 IAATGLNAVNEQLDGISNNIANAGTVGYKSMTTDFSAMYAD-----SQAMGVSVAGTAQS 59 Query: 67 SKEVGSFISTGTELDFALEGDAWFAL-ESPRGIILTRDGRFKVTDDGSLVSASGKYPVLD 125 GS +STG LD A+ +F + +S I TR G F+ +G +V+ASG Sbjct: 60 IARGGSMVSTGNALDLAINNGGFFVMCDSAGNITYTRAGSFETDKNGYIVNASGACLQGY 119 Query: 126 MASVPIQIPQKDEIFNVGEKGEISQK 151 + + G I + Sbjct: 120 PVDGSGTLQTGTVTDLQIQTGNIPAQ 145 Score = 68.0 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 17/132 (12%), Positives = 44/132 (33%), Gaps = 9/132 (6%) Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174 V+ + +Q+ +++ GE +G+++ L + G Sbjct: 273 VTTNSANGYASATQNGVQVDDDGKVYATYSNGERMLQGQIV----LATFPNENGLEAVSG 328 Query: 175 SGISPNIPPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 + S T+ G LE SN + E+ +++ + + + T +I Sbjct: 329 TAWVQTGESGSALIGVPGSGSCGTLSSGMLESSNVDITTELVELMTAQRNYQANTKVIST 388 Query: 230 NEKSMLEAIRNI 241 + + + + Sbjct: 389 STQLDDALFQAM 400 >gi|170744543|ref|YP_001773198.1| flagellar hook protein FlgE [Methylobacterium sp. 4-46] gi|168198817|gb|ACA20764.1| protein of unknown function DUF1078 domain protein [Methylobacterium sp. 4-46] Length = 407 Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 36/183 (19%), Positives = 70/183 (38%), Gaps = 2/183 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + G++ A R+STVA+N+ N T G++ + +FS ++ + D V + + Sbjct: 6 ALRTGMSGMNAQSNRISTVAENVQNAGTTGYKRVSTEFSSLLLSSSATGDYNSGSVETVQ 65 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL-TRDGRFKVT-DDGSLVSASGKY 121 + G+ +ST ++ D A+ G+ +F ++ G TR G F G+ +A+G Sbjct: 66 RRAVSDEGARVSTSSKSDLAIAGNGFFVVKDASGASYLTRAGNFVPDGSTGTFKNAAGFT 125 Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 + P + + + + K A+ SG P Sbjct: 126 LMGYSLKNGQASPTLNSLDGMVPVNISALGMKASASTKGALTGNLDSTAAAVTSGAVPAG 185 Query: 182 PPT 184 Sbjct: 186 SNY 188 Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 12/83 (14%), Positives = 27/83 (32%), Gaps = 5/83 (6%) Query: 162 SVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYEMGQMIHL 216 VD R + + L+ + G LE SN + E+ MI Sbjct: 322 DVDSPDNLKPRAGNVYETTLESGALQVGFANQGGRGGIVSGALEQSNVDVSTELTSMIAS 381 Query: 217 TQKFNSITTLIDENEKSMLEAIR 239 + + + + + + + ++ Sbjct: 382 QTVYTANSKVFMTSNEMLDTLMQ 404 >gi|254419105|ref|ZP_05032829.1| conserved domain protein [Brevundimonas sp. BAL3] gi|196185282|gb|EDX80258.1| conserved domain protein [Brevundimonas sp. BAL3] Length = 588 Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 11/90 (12%), Positives = 30/90 (33%), Gaps = 5/90 (5%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNANSMYE 209 IA + + + + + ++ T+ LE S + E Sbjct: 496 IAQVAIATFPSPDSLKEVSGNAYAVSLESGTFNLKAAGTGGAGTIAAQQLESSTVDLSAE 555 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +I + +++ + +I ++ + E I Sbjct: 556 FTGLITTQRAYSASSKIITTADEMLAELIN 585 Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 31/185 (16%), Positives = 64/185 (34%), Gaps = 8/185 (4%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV-GAIKNDIDQKISFVASGK 63 G++ A L+ ++ N++N +TVG++ + +F +V + V + Sbjct: 1 MLAGVSGLAANSAALAAISQNIANVNTVGYKRSQGEFQTLVNSQTRAGGSYSAGGVMANT 60 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-------LTRDGRFKVTDDGSLVS 116 + G T D A+ G +F + + TR G F+V + G L + Sbjct: 61 RAFVSQEGQLQRTTASTDLAVSGQGFFVTTTQAENVGATDTRLFTRAGAFRVDNLGYLKN 120 Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 ++G Y +I + I G ++ + + +S Sbjct: 121 SAGLYLQGWPVDSNGEIATDPSDLSRLRSVNIGSVGGTAEPTTRVQINANLRSTQAVSSP 180 Query: 177 ISPNI 181 +P Sbjct: 181 AAPTN 185 >gi|144901061|emb|CAM77925.1| probable: Flagellar hook protein FlgE, gene: FLGE OR GSU0419 [Magnetospirillum gryphiswaldense MSR-1] Length = 605 Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 39/236 (16%), Positives = 80/236 (33%), Gaps = 37/236 (15%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI-----SF 58 + N A +A + +++ N+SN +T G++ + F V+ K Sbjct: 79 AMNNASTAMMATSWDMGSISQNISNVNTTGYKRKETLFKTVMSESKAGPSTHSGKLNIFG 138 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWF----------------------ALESPR 96 V + Y ++ G+ + D A+ G + +++ P Sbjct: 139 VKTADRYHIEQQGTITGSNWNTDLAINGRGFLLVAPPSTTTSGTTVSSNAPTSASVDDPA 198 Query: 97 GIILTRDGRFKV----TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKG 152 ++ TRDG F + +A G Y + MA I Q + V E + +G Sbjct: 199 SVLYTRDGSFHFVAGPNQEKYFTTAGGNYVLGWMADDTGTIDQTGALTPVYTLPETTMEG 258 Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMY 208 + T ++ + ++ S + PL +T+ S ++ Sbjct: 259 RET-TEASVFANIPRDATLSASNFNSTSTFTDPLGASQTLTLNW-----SRVDATT 308 Score = 55.3 bits (131), Expect = 7e-06, Method: Composition-based stats. Identities = 11/122 (9%), Positives = 27/122 (22%), Gaps = 6/122 (4%) Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177 D I + K + + + + + Sbjct: 475 HIDNIATDGYGSGTLISSGFNERGEMYGQFTNGKTRALFKLPIAQFVAENNLEPISGNLF 534 Query: 178 SPNIPPTP------LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 + + LE SN + E +MI + + + T+ + Sbjct: 535 RRSREAGDITVSSVENAVGAPRFSPSSLEASNVDIGQEFTKMIVTQKAYTTNATVFKTAD 594 Query: 232 KS 233 + Sbjct: 595 EM 596 >gi|254440385|ref|ZP_05053879.1| conserved domain protein [Octadecabacter antarcticus 307] gi|198255831|gb|EDY80145.1| conserved domain protein [Octadecabacter antarcticus 307] Length = 432 Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 23/182 (12%), Positives = 49/182 (26%), Gaps = 23/182 (12%) Query: 81 DFALEGDAWFALESPRGIILTRDG--RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDE 138 D A G ++ + G T DG + + + Sbjct: 248 DLAGLGGRLLSVNNTTGGAYTADGTVSVTTDSGTIEIDIGNIGEPGGLTQLSDNFAPVSI 307 Query: 139 IFNVGEKGEISQK----------------GKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 I N G ++ +++ + L V G + +N S Sbjct: 308 IKNGSPVGTMTSVEVDANGFVRALFDNGVSRIMYQVPLVDVSNPNGLISEDNQSYSVTPE 367 Query: 183 P-----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 D + E+S + E+ +I + ++S +I ++ + E Sbjct: 368 SGQFFLWDAGDGPTGDIVSFAREESATDVAAELTNLIKTQRAYSSNAKVIQTVDEMLQET 427 Query: 238 IR 239 Sbjct: 428 TN 429 Score = 63.0 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 31/194 (15%), Positives = 65/194 (33%), Gaps = 3/194 (1%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 +SFN +A + RL+T++DN++N+ T G++ + F +V V Sbjct: 5 SSFNASVAGLASNASRLATISDNIANSSTYGYKRVVADFHSMVVDGGKGKYTAG-GVGVT 63 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF--KVTDDGSLVSASGK 120 + L E G ++T D A+ G + + + + F ++ GS + + Sbjct: 64 TQRLIDERGPLVATSNATDLAVRGRGMLPVTERSSVSVGSESDFSLRLATTGSFRTDAEG 123 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 Y + + P + + + I + V + + Sbjct: 124 YLTTTNGLLLLGWPSNADGSLPNLPRDTIGGLEPIRIDTNQFISDPTTNVELAVNLPATA 183 Query: 181 IPPTPLEDLSGVTV 194 D + V Sbjct: 184 TEAGASGDTEELLV 197 >gi|329849962|ref|ZP_08264808.1| flagellar hook protein flgE [Asticcacaulis biprosthecum C19] gi|328841873|gb|EGF91443.1| flagellar hook protein flgE [Asticcacaulis biprosthecum C19] Length = 474 Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 29/172 (16%), Positives = 59/172 (34%), Gaps = 7/172 (4%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + G+ A A LST+++N++N +T G++ + F+ +V + V + Sbjct: 4 NRAMQSGVTALAANASALSTISNNIANANTTGYKRVTTNFTNLVSGTSGTATYASNGVTA 63 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFAL-------ESPRGIILTRDGRFKVTDDGSL 114 + G + + ++G +F ++ TRDG F G L Sbjct: 64 AVQQNMTARGELNAASSGYSLGIDGQGFFVTSDTSDAINQGSTMLFTRDGSFNTDTSGYL 123 Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 +A+G Y A + ++ + S D + Sbjct: 124 RNAAGLYLQGWQADSSGTVNPSSTDITRLGPINVANIANRAESTTRVSFDAN 175 Score = 64.1 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 10/97 (10%), Positives = 34/97 (35%), Gaps = 5/97 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLED 201 + + +A + L + + G + + + + + LE Sbjct: 374 YNNGNTRTLAQVALATFINANGLTPISGNAFTVSSQSGGFTLREPGEGGAGNLAPAALEA 433 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S + E +I + +++ + +I +++ + E + Sbjct: 434 STVDLAQEFTGLITTQRAYSAASKIITTSDEMLQELL 470 >gi|313895783|ref|ZP_07829337.1| flagellar hook-basal body complex protein FlhP domain protein [Selenomonas sp. oral taxon 137 str. F0430] gi|312975208|gb|EFR40669.1| flagellar hook-basal body complex protein FlhP domain protein [Selenomonas sp. oral taxon 137 str. F0430] Length = 117 Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 13/90 (14%), Positives = 30/90 (33%), Gaps = 6/90 (6%) Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPP------TPLEDLSGVTVKRGFLEDSNANSMYE 209 A + + G + + + + +G + LE SN + + Sbjct: 25 AQVAVAKFPNPSGLTKLGGNLYQESNNSNVKTVQPQTVETAGAKITPSSLEMSNVDISDQ 84 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 MI + F S + +I +++ + I Sbjct: 85 FSDMIITQRGFQSNSKIITVSDEMLETLIN 114 >gi|21748188|emb|CAD41958.1| flagellar hook protein [Pseudomonas fluorescens] Length = 181 Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 24/128 (18%), Positives = 41/128 (32%), Gaps = 5/128 (3%) Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + PV D + K + V +Q+ K I + L S + QG + Sbjct: 52 SYRNPPVTDGYATGQITGLKIDGSGVLFATFSNQQSKAIGQISLASFNNEQGLQPAGGTT 111 Query: 177 ISPNIPP-----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 E + ++K LE+SN N E+ +I + + I Sbjct: 112 WKETFASGQPGYDAPESGTLGSIKASSLENSNVNLTNELVDLIKAQSNYQANAKTISTQS 171 Query: 232 KSMLEAIR 239 M I+ Sbjct: 172 TIMQTIIQ 179 >gi|218672515|ref|ZP_03522184.1| flagellar basal body rod protein FlgG [Rhizobium etli GR56] Length = 58 Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 10/52 (19%), Positives = 25/52 (48%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 + I A + L +A+N++N +T GF+ + +F++++ + Sbjct: 1 MRALAIAATGMDAQQTNLEVIANNIANINTTGFKRARAEFTDLLYQTERAKG 52 >gi|156976141|ref|YP_001447047.1| flagellar hook protein FlgE [Vibrio harveyi ATCC BAA-1116] gi|156527735|gb|ABU72820.1| hypothetical protein VIBHAR_04912 [Vibrio harveyi ATCC BAA-1116] Length = 399 Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 30/132 (22%), Positives = 53/132 (40%), Gaps = 6/132 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SFNI L+ A L+T++ N++N T GF+ + +F+ V + Q + Sbjct: 2 SFNIALSGLDATNTELNTISHNIANASTYGFKGGRTEFAAVY-----NGMQPGGVEVASI 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLVSASGKYP 122 + GS TG +D A+ G +F + G + TR G F + + + +G Sbjct: 57 SQNFDKNGSVTGTGRAMDLAINGSGFFVTKDHMGQMLYTRAGVFGTDKNNFVTANNGAKL 116 Query: 123 VLDMASVPIQIP 134 + Sbjct: 117 QGYSVDNNANLQ 128 Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 18/134 (13%), Positives = 43/134 (32%), Gaps = 9/134 (6%) Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172 VS + +++ ++ G+ +G+V+ L +QG + Sbjct: 270 FGVSTNNPNGYTSGELAGVRVEDNGMVYATYTNGQSQLQGQVV----LADFANTQGLSKV 325 Query: 173 ENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 + + + T + G LE SN + E+ ++ + + + I Sbjct: 326 SGTAWTQSFSSGAPIMGVPGTGTLGDLTPGALEGSNVDLTSELVALMTAQRNYQANAKTI 385 Query: 228 DENEKSMLEAIRNI 241 N+K + Sbjct: 386 STNDKLTQALFNAV 399 >gi|153831673|ref|ZP_01984340.1| flagellar hook protein FlgE [Vibrio harveyi HY01] gi|269960116|ref|ZP_06174492.1| Flagellar hook protein flgE [Vibrio harveyi 1DA3] gi|148872183|gb|EDL71000.1| flagellar hook protein FlgE [Vibrio harveyi HY01] gi|269835087|gb|EEZ89170.1| Flagellar hook protein flgE [Vibrio harveyi 1DA3] Length = 399 Score = 70.3 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 30/132 (22%), Positives = 53/132 (40%), Gaps = 6/132 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SFNI L+ A L+T++ N++N T GF+ + +F+ V + Q + Sbjct: 2 SFNIALSGLDATNTELNTISHNIANASTYGFKGGRTEFAAVY-----NGMQPGGVEVASI 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLVSASGKYP 122 + GS TG +D A+ G +F + G + TR G F + + + +G Sbjct: 57 SQNFDKNGSVTGTGRAMDLAINGSGFFVTKDHMGQMLYTRAGVFGTDKNNFVTANNGAKL 116 Query: 123 VLDMASVPIQIP 134 + Sbjct: 117 QGYSVDNNANLQ 128 Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 18/134 (13%), Positives = 43/134 (32%), Gaps = 9/134 (6%) Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172 VS + +++ ++ G+ +G+V+ L +QG + Sbjct: 270 FGVSTNNPNGYTSGELAGVRVEDNGMVYATYTNGQSQLQGQVV----LADFANTQGLSKV 325 Query: 173 ENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 + + + T + G LE SN + E+ ++ + + + I Sbjct: 326 SGTAWTQSFSSGAPIMGVPGTGTLGDLTPGALEGSNVDLTSELVALMTAQRNYQANAKTI 385 Query: 228 DENEKSMLEAIRNI 241 N+K + Sbjct: 386 STNDKLTQALFNAV 399 >gi|296535149|ref|ZP_06897378.1| flagellar hook protein FlgE [Roseomonas cervicalis ATCC 49957] gi|296264524|gb|EFH10920.1| flagellar hook protein FlgE [Roseomonas cervicalis ATCC 49957] Length = 436 Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 59/165 (35%), Gaps = 13/165 (7%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 S + A ++ V++N++N+ T G++ + F+E + ++ + A+ Sbjct: 8 SLYAATSGLGAQTAAITNVSNNVANSQTTGYKRVDTAFAEQLSQSTARLNGSSTVSAAPV 67 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESP------------RGIILTRDGRFKVTDD 111 +S G L A+ G+ FA+ P TR+G F T + Sbjct: 68 ATVS-RGGDISQVENPLALAISGNGLFAVSRPAGTDANGNTVFSPTQFYTRNGDFSKTAE 126 Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156 G LV+ SG + + + V E + I Sbjct: 127 GYLVNTSGYALEGWPVANGAVNRGQLGLIQVDEAPYAPEATTQIG 171 Score = 68.7 bits (166), Expect = 6e-10, Method: Composition-based stats. Identities = 22/162 (13%), Positives = 51/162 (31%), Gaps = 5/162 (3%) Query: 86 GDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEK 145 GD + A P I L G + + + + A+ + Sbjct: 275 GDLFGAGSQPVAISLGTFGSTQGVTQYAGATYQQNSVTANGAAPGAYTGVGIKENGEVVV 334 Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLE 200 + K + IA + + + + G R + + + T+ +E Sbjct: 335 SYDNGKSRTIAQVPIVTFQNADGLQREDGQAFTATQAAGQFRVLAAGEQGTGTLATSSIE 394 Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 SN + E +MI + +++ + ++ M E + + Sbjct: 395 ASNVDITSEFSKMIVAQRAYSANSRVLSTVSGLMSETVDMLR 436 >gi|322380221|ref|ZP_08054447.1| flagellar hook protein FlgE [Helicobacter suis HS5] gi|321147348|gb|EFX42022.1| flagellar hook protein FlgE [Helicobacter suis HS5] Length = 619 Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 14/128 (10%), Positives = 36/128 (28%), Gaps = 5/128 (3%) Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + + + + + V + K +A + L + G S Sbjct: 489 SETYAIEQNGYQAGDLMDVRFDNDGVLLGSFSNGKTLSLAQVALANFANDAGLQADGGSV 548 Query: 177 ISPNIPPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 S V LE SN + + +I + + F + + + ++ Sbjct: 549 FSETSNSGKALIGAANTGRRGGVSGSKLESSNVDLSRSLTNLIVVQRGFQANSKAVTTSD 608 Query: 232 KSMLEAIR 239 + + + Sbjct: 609 QILNTLLN 616 >gi|323203175|gb|EFZ88205.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] Length = 179 Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 44/127 (34%), Gaps = 4/127 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V + + V Sbjct: 1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVDGLSLATRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + G T LD AL+ D W +++ TR+G +V G ++ G Sbjct: 59 ASTPGADMTPGQLDYTSRPLDVALQQDGWLVVQAADGAEGYTRNGNIQVGPTG-QLTIQG 117 Query: 120 KYPVLDM 126 + + Sbjct: 118 HPVIGEG 124 >gi|600722|gb|AAA92801.1| flagellar hook FlgE [Helicobacter mustelae] Length = 403 Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 33/185 (17%), Positives = 57/185 (30%), Gaps = 15/185 (8%) Query: 24 DNMSNTDTVGFRTIKVKFSEVVGAI-------------KNDIDQKISFVASGKEYLSKEV 70 +N++N +T GF+ + F +++ + V Sbjct: 1 NNIANVNTTGFKYSRASFVDMISQTKLIATSPHKGGLGGQNDVSVGLGVNVNSTTKVFSQ 60 Query: 71 GSFISTGTELDFALEGDAWFALES--PRGIILTRDGRFKVTDDGSLVSASGKYPVLDMAS 128 GS +T + D A+EGD +F + + TRDG F +G+LV+ G M Sbjct: 61 GSTQNTDVKTDLAIEGDGFFIISPDRGKTQNFTRDGEFLFDANGNLVTNGGYVVQGWMKD 120 Query: 129 VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED 188 + E + I + S R N ++ Sbjct: 121 DLRNAEKISEDDFFRVDTTKPIQNIQIDPAMMMPARASSNISLRANLNAGRHVDQVANVF 180 Query: 189 LSGVT 193 G T Sbjct: 181 GLGST 185 >gi|295678058|ref|YP_003606582.1| fagellar hook-basal body protein [Burkholderia sp. CCGE1002] gi|295437901|gb|ADG17071.1| fagellar hook-basal body protein [Burkholderia sp. CCGE1002] Length = 510 Score = 69.9 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 60/151 (39%), Gaps = 2/151 (1%) Query: 19 LSTVADNMSNTDTVGFRTIKVKFSEVVGAI--KNDIDQKISFVASGKEYLSKEVGSFIST 76 L + +N++N +TVGF++ +F+++ Q + G+ +T Sbjct: 17 LDVIGNNIANANTVGFKSGTAEFADMYANSVATATSQQIGIGTKLSEVQQQFSQGTITTT 76 Query: 77 GTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQK 136 L+ A+ G+ ++ L ++ +R+G F++ +G + +A G + AS I Sbjct: 77 NQALNVAINGNGFYQLSDNGTLVYSRNGVFQLDKNGFITNAQGLKLMGYAASSAGIINTA 136 Query: 137 DEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 + I+ + T GL Sbjct: 137 QTVPLTVPTANIAPQATTSITAGLNLNAQDN 167 Score = 64.9 bits (156), Expect = 8e-09, Method: Composition-based stats. Identities = 13/125 (10%), Positives = 34/125 (27%), Gaps = 5/125 (4%) Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 D + + + + + L + G V N+ Sbjct: 385 NNLSTDGYAAGQLTSFTVSADGTLTGNYSNGQTAALGQIVLANFANQNGLVNLGNNEYGQ 444 Query: 180 NIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 + + + ++ G +E+SN + E+ +I + + + I + Sbjct: 445 TSASGVAQISTPGSTNHGVLQGGAVENSNVDLTSELVNLITAQRNYQANAQTIKTQQAVD 504 Query: 235 LEAIR 239 I Sbjct: 505 QTLIN 509 >gi|56695115|ref|YP_165462.1| flagellar hook protein FlgE, putative [Ruegeria pomeroyi DSS-3] gi|56676852|gb|AAV93518.1| flagellar hook protein FlgE, putative [Ruegeria pomeroyi DSS-3] Length = 431 Score = 69.5 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 39/168 (23%), Positives = 67/168 (39%), Gaps = 8/168 (4%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 +S N G+AA A RL+T++DN++N+ T G++ ++ F +V A V + Sbjct: 5 SSLNAGVAALSANASRLATISDNIANSSTYGYKRVETDFHALVNASGRGKYTAG-GVRTT 63 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-------LTRDGRFKVTDDGSLV 115 + L + GS +ST D A+ G + + L G F+ D+G L Sbjct: 64 TQRLIDQRGSLVSTSNSTDLAVRGRGMLPVMRSSQLALPQQDMLLATTGSFRTDDEGYLK 123 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 S +G + A+ IP + G ++ V Sbjct: 124 SEAGLVLMGWRANPDGSIPNLPRDTSDGLVPVQLSVNQLSGAPTTEMV 171 Score = 66.8 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 15/120 (12%), Positives = 37/120 (30%), Gaps = 5/120 (4%) Query: 125 DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP- 183 D +V + + + + + + L + G V ++ P+ Sbjct: 309 DGTAVGTMSRVEVDENGFVYAFFDNGVSRRVFQIPLVDMPNPNGLVALDSQTYEPSRESG 368 Query: 184 ----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 D + E+S + E+ MI + ++S +I ++ + E Sbjct: 369 TFFLWDAGDGPTGDLVSFAREESTTDVATELTAMIQTQRAYSSSAKVIQTVDEMLQETTN 428 >gi|255262922|ref|ZP_05342264.1| flagellar hook protein FlgE [Thalassiobium sp. R2A62] gi|255105257|gb|EET47931.1| flagellar hook protein FlgE [Thalassiobium sp. R2A62] Length = 422 Score = 69.5 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 32/163 (19%), Positives = 63/163 (38%), Gaps = 8/163 (4%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 +S N G+A A +L+T++DN++N+ T G++ F +V N V+ Sbjct: 5 SSLNAGIAGLAANASKLATISDNIANSSTFGYKRAGADFHSLVTGSGNGTYSAG-GVSVT 63 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALES-------PRGIILTRDGRFKVTDDGSLV 115 + + GS +ST D ++ G + + ++LT G F+ +G L Sbjct: 64 TQRMVDARGSLVSTSNATDLSISGRGMLPVTNRSGVESGDSAMMLTSTGSFRTDSNGYLT 123 Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158 ++ G + A +P + + K + Sbjct: 124 TSGGLVLMGVPADGDGVVPTFSRDTQAALQPIKIDRTKFVGEP 166 Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 13/120 (10%), Positives = 36/120 (30%), Gaps = 5/120 (4%) Query: 125 DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP- 183 + + V I + + + + + + + + V G S + Sbjct: 300 NGSPVGNMISIEVNEKGIVQGIFDTGTTRALYQVPIVDVPNPNGLKAGNQQTFSISQNSG 359 Query: 184 ----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 V E+S + E+ Q+I + +++ +I ++ + E Sbjct: 360 SFYLWDAGAGPVGDVVSYAREESTTDVAAELTQLIQTQRAYSTNAKVIQTVDEMLQETTN 419 >gi|163742565|ref|ZP_02149951.1| flagellar hook protein FlgE, putative [Phaeobacter gallaeciensis 2.10] gi|161384150|gb|EDQ08533.1| flagellar hook protein FlgE, putative [Phaeobacter gallaeciensis 2.10] Length = 440 Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats. Identities = 35/143 (24%), Positives = 59/143 (41%), Gaps = 10/143 (6%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 +S N G+A A RL++++DN++N+ T G++ ++ F +V + V + Sbjct: 12 SSLNAGVAGLTANASRLASISDNIANSSTAGYKRVQTDFHSMVMSSSGGTYSAG-GVRTT 70 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALES---------PRGIILTRDGRFKVTDDGS 113 L E G +ST D A+ G + S ++LT F+ DG Sbjct: 71 NVRLIDERGPLVSTSNATDLAVRGRGMLPVTSMNEVETGAANPQMMLTTTASFRTNADGL 130 Query: 114 LVSASGKYPVLDMASVPIQIPQK 136 L + SG + A IP Sbjct: 131 LATESGLVLMGWPAQSDGTIPPY 153 Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 15/120 (12%), Positives = 37/120 (30%), Gaps = 5/120 (4%) Query: 125 DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP- 183 D A V + + + +V+ + L + G + + P+ Sbjct: 318 DGAPVGNFTGVEIDEAGYVHANYDTGVSRVVYQVPLVDLPNPNGMIAMDRQTYMPSSESG 377 Query: 184 ----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + + E+S + E+ MI + ++S +I ++ + E Sbjct: 378 SYFLWNAGEGPTGDILGYAREESATDVAGELTNMIQTQRAYSSNAKVIQTVDEMLQETTN 437 >gi|213613181|ref|ZP_03371007.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 110 Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats. Identities = 13/98 (13%), Positives = 36/98 (36%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLED 201 +++ +V+ + L + ++G + ++ + + + G LE Sbjct: 11 YSNEQEQVLGQIVLANFANNEGLASQGDNVWAATQASGVALLGTAGSGNFGKLTNGALEA 70 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ MI + + S I ++ + + Sbjct: 71 SNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVN 108 >gi|260429561|ref|ZP_05783538.1| flagellar hook protein FlgE [Citreicella sp. SE45] gi|260420184|gb|EEX13437.1| flagellar hook protein FlgE [Citreicella sp. SE45] Length = 431 Score = 69.5 bits (168), Expect = 4e-10, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 72/202 (35%), Gaps = 9/202 (4%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 +S N G++ RL+ ++DN++N+ T G+R ++ F+ +V + + Sbjct: 5 SSLNAGVSGLSGNASRLAAISDNIANSSTYGYRRVETDFTALVMSSGTRTYTAG-GTSVD 63 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAW--------FALESPRGIILTRDGRFKVTDDGSL 114 + + G+ +ST D A++G + ++LT G F++ ++G L Sbjct: 64 NLRVVDQGGALVSTSNATDLAIDGIGMLPVVAVSQYEATGEPELLLTSTGSFRIDENGYL 123 Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174 S SG Y + A++ IP G + + ++ + Sbjct: 124 ASESGYYLMGWPANLDGTIPNYPRDTINGLEPIQFSLSLTGDPTTSVDMALNLPATATQA 183 Query: 175 SGISPNIPPTPLEDLSGVTVKR 196 + + Sbjct: 184 GASGETEYLEIEYFDNVGISQS 205 Score = 66.8 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 19/120 (15%), Positives = 43/120 (35%), Gaps = 5/120 (4%) Query: 125 DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP- 183 D +SV + + + S + +V+ + L + G + + S P+ Sbjct: 309 DGSSVGNMVSVEVDENGYVSALYDSGQSQVLYQIPLADLPNYNGMIAVDGSTFRPSPESG 368 Query: 184 ----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 D +VK ++S + E+ MI + ++S +I ++ + E Sbjct: 369 SFFLWDAGDGPTGSVKSYARQESATDIARELTDMIRTQRAYSSNAKVIQTVDEMLQETTN 428 >gi|163803169|ref|ZP_02197052.1| flagellar hook protein [Vibrio sp. AND4] gi|159173069|gb|EDP57902.1| flagellar hook protein [Vibrio sp. AND4] Length = 399 Score = 69.1 bits (167), Expect = 4e-10, Method: Composition-based stats. Identities = 30/132 (22%), Positives = 53/132 (40%), Gaps = 6/132 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SFNI L+ A L+T++ N++N T GF+ + +F+ V + Q + Sbjct: 2 SFNIALSGLDATNTELNTISHNIANASTYGFKGGRTEFAAVY-----NGMQPGGVEVASI 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGII-LTRDGRFKVTDDGSLVSASGKYP 122 + GS TG +D A+ G +F + G + TR G F + + + +G Sbjct: 57 SQNFDKNGSVTGTGRAMDLAINGSGFFVTKDNMGQMLYTRAGVFGTDKNNFVTANNGAKL 116 Query: 123 VLDMASVPIQIP 134 + Sbjct: 117 QGYSVDNNANLQ 128 Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 18/134 (13%), Positives = 43/134 (32%), Gaps = 9/134 (6%) Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172 VS + +++ ++ G+ +G+V+ L +QG + Sbjct: 270 FGVSTNNPNGYTSGELAGVRVEDNGMVYATYTNGQSQLQGQVV----LADFANTQGLSKV 325 Query: 173 ENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 + + + T + G LE SN + E+ ++ + + + I Sbjct: 326 SGTSWTQSFSSGAPIMGVPGTGTLGNLTPGALEGSNVDLTSELVALMTAQRNYQANAKTI 385 Query: 228 DENEKSMLEAIRNI 241 N+K + Sbjct: 386 STNDKLTQALFNAV 399 >gi|226327744|ref|ZP_03803262.1| hypothetical protein PROPEN_01617 [Proteus penneri ATCC 35198] gi|225203448|gb|EEG85802.1| hypothetical protein PROPEN_01617 [Proteus penneri ATCC 35198] Length = 98 Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 32/89 (35%), Gaps = 3/89 (3%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQ 212 K++ V G +G++ P +D V V G LE SN N M Sbjct: 9 KMVKPEQNDLVRGDDGLFHLSPNGVARAGAELPADDS--VKVLAGVLEGSNVNPAEAMVD 66 Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIRNI 241 MI ++F +I + + A + Sbjct: 67 MIANARRFEMQMKVIHSADDNAQRA-NQL 94 >gi|258512707|ref|YP_003186141.1| flagellar basal body rod protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257479433|gb|ACV59752.1| flagellar basal body rod protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 403 Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats. Identities = 30/207 (14%), Positives = 54/207 (26%), Gaps = 10/207 (4%) Query: 46 GAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGR 105 G+ +D A Y + ++ A+ D L + ++ Sbjct: 192 GSETDDPYAIRVGNADDMGYHAFLPVNYADANGRSGLAVTRDGALQLNAENVVVDAAGHA 251 Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFN----------VGEKGEISQKGKVI 155 D V G+ V + Q +G+ G++ Sbjct: 252 IAPLDAAGRVMVGGRIVVNPLYHGTQIFSQSGTPVYDANGQPSFRVYDAQGQPVAGGRIG 311 Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIH 215 + G G PL S + G LE SN N M QM+ Sbjct: 312 LVDADVTQLQPLGEGEYMVGGSYQAAAVEPLLRASTGRMVFGALESSNVNVAATMAQMMQ 371 Query: 216 LTQKFNSITTLIDENEKSMLEAIRNIA 242 + + + + + A +I Sbjct: 372 ALNAYEANQRVAQSVDSMLNVAATDIG 398 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 31/208 (14%), Positives = 62/208 (29%), Gaps = 15/208 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTI-----------KVKFSEVVGAIK 49 M + A ++ +++N++N +T GF+ ++S G+ Sbjct: 1 MIQGLTAAASGMAAEDRLEQLLSNNLANQETPGFKASIGELIEDPVFAMERYSYGDGSDG 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109 I + V + S G +TG LD A+ LT G K Sbjct: 61 IGIGEMGGGVDFQEGVPSFSEGGLETTGRPLDLAIVD---VLSSGEVAYALTPQGA-KPV 116 Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169 V A G+ M + + + Q ++++ G + D + Sbjct: 117 AGLVTVGAGGRLTAGGMPLAVYGLDGQPVQGLFAVRNPSYQGSELLSEGGAPAYDAAGRP 176 Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRG 197 + + E ++ G Sbjct: 177 SYVFENAAGQVVYTPGSETDDPYAIRVG 204 >gi|39936993|ref|NP_949269.1| flagellar hook protein flgE [Rhodopseudomonas palustris CGA009] gi|192292821|ref|YP_001993426.1| hypothetical protein Rpal_4455 [Rhodopseudomonas palustris TIE-1] gi|39650850|emb|CAE29373.1| probable flagellar hook protein flgE [Rhodopseudomonas palustris CGA009] gi|192286570|gb|ACF02951.1| protein of unknown function DUF1078 domain protein [Rhodopseudomonas palustris TIE-1] Length = 598 Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats. Identities = 28/132 (21%), Positives = 52/132 (39%), Gaps = 12/132 (9%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + +A + L ++ N++N+ T F+ I F +++ N+ Q V +G Sbjct: 6 ALTTSVAGLRSNSYALENISGNIANSQTTAFKRIDTSFLDLIPQAGNN-QQLAGSVTAGS 64 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRG-----------IILTRDGRFKVTDDG 112 + GS S A+ G+ +F ++ P TR G F + +G Sbjct: 65 RLTNTTQGSVQSASVSTYMAINGEGFFVVQKPSSFSDNNPIFPGVDNFTRRGDFSLDKNG 124 Query: 113 SLVSASGKYPVL 124 LV+ +G Y Sbjct: 125 YLVNGAGYYLEG 136 Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 15/120 (12%), Positives = 36/120 (30%) Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 D S + + + +A + + + + + R + Sbjct: 476 NQLQQDGYSAGQLVSVSVSNDGRVVGAYSNGRNIDLAEVSVATFNGANFLKRTDGGAFEI 535 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G +V LE SN + E ++I Q +++ T +I + + + Sbjct: 536 TNESGQPLYGKGGSVSGSSLESSNTDIADEFTKLIVTQQAYSANTKVITTANTMVQDLLN 595 >gi|296127542|ref|YP_003634794.1| flagellar basal-body rod protein FlgC [Brachyspira murdochii DSM 12563] gi|296019358|gb|ADG72595.1| flagellar basal-body rod protein FlgC [Brachyspira murdochii DSM 12563] Length = 153 Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 24/48 (50%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 K G++E N N + EM M+ ++ + + +T+I + A+ I Sbjct: 105 KAGYVEMPNVNPVTEMVDMMEASRAYEANSTMIQSAKTMFGSALNIIR 152 Score = 56.4 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 20/122 (16%), Positives = 33/122 (27%), Gaps = 12/122 (9%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKI 56 + N + A RL +ADN++N +T FR +V F D K Sbjct: 5 SIINTSGSGLTAQRTRLDVIADNIANVNTTRTTEGGAFRRSRVIFK------PRDDGNKY 58 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVS 116 + E D + P I + + + V+ Sbjct: 59 RSPFLPEALQPNVGTGVRVFSIEKDMETATRFVYDPSHPDAIKYGEKAGYVEMPNVNPVT 118 Query: 117 AS 118 Sbjct: 119 EM 120 >gi|300870979|ref|YP_003785850.1| flagellar basal body rod protein FlgC [Brachyspira pilosicoli 95/1000] gi|300688678|gb|ADK31349.1| flagellar basal body rod protein, FlgC [Brachyspira pilosicoli 95/1000] Length = 153 Score = 69.1 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 24/48 (50%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 K G++E N N + EM M+ ++ + + +T+I + A+ I Sbjct: 105 KAGYVEMPNVNPVTEMVDMMEASRAYEANSTMIQSAKTMFGSALNIIR 152 Score = 56.8 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 20/122 (16%), Positives = 33/122 (27%), Gaps = 12/122 (9%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKI 56 + N + A RL +ADN++N +T FR +V F D K Sbjct: 5 SIINTSGSGLTAQRTRLDVIADNIANVNTTRTTEGGAFRRSRVVFK------PRDDGNKY 58 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVS 116 + E D + P I + + + V+ Sbjct: 59 RSPFLPEALQPNVGTGVRVFSIEKDMETATRFVYDPSHPDAIKYGEKAGYVEMPNVNPVT 118 Query: 117 AS 118 Sbjct: 119 EM 120 >gi|225619783|ref|YP_002721040.1| flagellar basal body rod protein FlgC [Brachyspira hyodysenteriae WA1] gi|225214602|gb|ACN83336.1| flagellar basal body rod protein FlgC [Brachyspira hyodysenteriae WA1] Length = 153 Score = 69.1 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 24/48 (50%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 K G++E N N + EM M+ ++ + + +T+I + A+ I Sbjct: 105 KAGYVEMPNVNPVTEMVDMMEASRAYEANSTMIQSAKTMFGSALNIIR 152 Score = 56.4 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 20/122 (16%), Positives = 32/122 (26%), Gaps = 12/122 (9%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKI 56 + N + A RL +ADN++N +T FR +V F D K Sbjct: 5 SIINTSGSGLTAQRTRLDVIADNIANVNTTRTTEGGAFRRSRVIFK------PRDDGNKY 58 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVS 116 E D + P I + + + V+ Sbjct: 59 RSPFLPDALQPNVGTGVRVFSIEKDMETATRFVYDPSHPDAIKYGEKAGYVEMPNVNPVT 118 Query: 117 AS 118 Sbjct: 119 EM 120 >gi|86136709|ref|ZP_01055287.1| flagellar hook protein FlgE, putative [Roseobacter sp. MED193] gi|85826033|gb|EAQ46230.1| flagellar hook protein FlgE, putative [Roseobacter sp. MED193] Length = 388 Score = 68.7 bits (166), Expect = 6e-10, Method: Composition-based stats. Identities = 20/123 (16%), Positives = 38/123 (30%), Gaps = 5/123 (4%) Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 D + V + + + S +VI + L V G +N P+ Sbjct: 263 VTKDGSEVGTMVGVEVDPQGYVRANYDSGASRVIFKIPLVDVPNLNGLKSLDNQTYLPSS 322 Query: 182 PP-----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 D V E+S + E+ MI + ++S +I ++ + E Sbjct: 323 DSGSYFLWDAGDGPTGEVASYAQEESATDVATELTDMIKTQRAYSSNAKVIQTVDEMLQE 382 Query: 237 AIR 239 Sbjct: 383 TTN 385 >gi|238782792|ref|ZP_04626821.1| Flagellar basal body FlaE domain protein [Yersinia bercovieri ATCC 43970] gi|238716215|gb|EEQ08198.1| Flagellar basal body FlaE domain protein [Yersinia bercovieri ATCC 43970] Length = 359 Score = 68.7 bits (166), Expect = 6e-10, Method: Composition-based stats. Identities = 13/125 (10%), Positives = 32/125 (25%), Gaps = 5/125 (4%) Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 + + + + +++ + L S G + ++ Sbjct: 233 DRQSTTGYAPGMMNGYTVGDGGEIIASYSNGEQQLLGQVVLSSFTNPGGLSSQGDNCWLE 292 Query: 180 NIPPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 + + LE SN + EM MI + + S + I + + Sbjct: 293 TPESGQPVTGISGTGNLGKLSGNKLEASNVDLSKEMVNMIVYQRNYQSNSQTIKTQSELL 352 Query: 235 LEAIR 239 Sbjct: 353 QILAN 357 >gi|260574380|ref|ZP_05842384.1| protein of unknown function DUF1078 domain protein [Rhodobacter sp. SW2] gi|259023276|gb|EEW26568.1| protein of unknown function DUF1078 domain protein [Rhodobacter sp. SW2] Length = 435 Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 64/164 (39%), Gaps = 10/164 (6%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS-FVAS 61 ++ + G+A A RL++++DN++N+ T G++ F +V + V + Sbjct: 5 SALSAGVAGLNANATRLASISDNIANSGTYGYKRASTDFESMVITQAAGAGTYSAGGVRA 64 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALE---------SPRGIILTRDGRFKVTDDG 112 L E G+ +ST LD A+ G + + +++T G F+ +G Sbjct: 65 STTRLIDERGALVSTSNALDLAVSGRGMLPVSATAGLGTDLAGTNLMMTTTGSFRPDANG 124 Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA 156 L + SG + A+ IP G + + Sbjct: 125 VLRTQSGLVLLGWPANADGTIPVLPRDTIAGLTPVVINSNQQAG 168 Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 12/98 (12%), Positives = 28/98 (28%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLED 201 + + + + L G + N + D V E Sbjct: 335 YDTGFTRRLYQIPLVDTPNLNGLIALNNQTYQISPNSGSFFLWDAGDGPTGAVVGYSREG 394 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S + E+ +I + ++S +I ++ + E Sbjct: 395 STTDVAAELTNLIQTQRAYSSNAKVIQTVDEMLQETTN 432 >gi|289670509|ref|ZP_06491584.1| flagellar basal body rod protein FlgF [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 141 Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats. Identities = 26/132 (19%), Positives = 47/132 (35%), Gaps = 6/132 (4%) Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 T +G V G P+ ++I I + + V + VD Sbjct: 5 TANGHAVLDEGGTPMTIPPHQAMEIGSDGSISIIPQGEGPQTMAIV---GKMKVVDAPAD 61 Query: 169 FVRRENSGISPNIPPTPLEDLSGVT---VKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225 + R G+ N P + + T + G LE SN ++ + +MI L ++F Sbjct: 62 RLTRRPDGLMRNTSTDPAQAFAVATGKTINSGMLEGSNVDAAGALVEMIQLQRQFEMQVK 121 Query: 226 LIDENEKSMLEA 237 +I + + A Sbjct: 122 IIKNGDDNAQSA 133 >gi|323706570|ref|ZP_08118123.1| protein of unknown function DUF1078 domain protein [Thermoanaerobacterium xylanolyticum LX-11] gi|323534077|gb|EGB23875.1| protein of unknown function DUF1078 domain protein [Thermoanaerobacterium xylanolyticum LX-11] Length = 59 Score = 68.4 bits (165), Expect = 7e-10, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 22/55 (40%), Gaps = 1/55 (1%) Query: 188 DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 V++GFLE SN + EM MI + + + I + + N+ Sbjct: 5 QGRMGNVRQGFLETSNVQVVNEMVNMIAAQRAYELNSKAIQAADDML-SIANNLR 58 >gi|146341767|ref|YP_001206815.1| flagellar hook protein FlgE [Bradyrhizobium sp. ORS278] gi|146194573|emb|CAL78598.1| putative flagellar hook protein FlgE [Bradyrhizobium sp. ORS278] Length = 415 Score = 68.4 bits (165), Expect = 8e-10, Method: Composition-based stats. Identities = 27/118 (22%), Positives = 50/118 (42%), Gaps = 4/118 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + + ++A A L+ ++DN+SN DT G++T F ++V A + V+ Sbjct: 6 ALSSAISALNAQSSSLAMISDNISNADTTGYKTTSGLFEQLVTASSSSKAYSSGGVSVSG 65 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALES----PRGIILTRDGRFKVTDDGSLVSA 117 + G +T D A++G +F S TR+G F + G + + Sbjct: 66 RSNITQQGLLAATTNATDVAIQGSGFFVATSSTAAGGETFYTRNGAFTTDNAGYIENN 123 Score = 48.3 bits (113), Expect = 8e-04, Method: Composition-based stats. Identities = 12/101 (11%), Positives = 32/101 (31%), Gaps = 5/101 (4%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLED 201 + + I + + + G V + + + T+ LE Sbjct: 315 YSNGQTVPIYKIAVATFADPNGLVAHSSGMYTSTATSGNATLQASGENGAGTIYGSELES 374 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S ++ + MI Q +++ + ++ K I ++ Sbjct: 375 STTDTTGQFSNMISAQQAYSAASQVVSAVNKMYDTLISSMR 415 >gi|218290052|ref|ZP_03494219.1| flagellar basal body rod protein [Alicyclobacillus acidocaldarius LAA1] gi|218239886|gb|EED07074.1| flagellar basal body rod protein [Alicyclobacillus acidocaldarius LAA1] Length = 403 Score = 68.4 bits (165), Expect = 8e-10, Method: Composition-based stats. Identities = 19/125 (15%), Positives = 33/125 (26%) Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177 G + + +G G++ + G G Sbjct: 274 HGTQIFSQSGTPVYDANGQPSFRVYDAQGNPVAGGRIGLVDADVAGLQPLGEGEYMVGGS 333 Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 PL S + G LE SN N M QM+ + + + + + A Sbjct: 334 YQAAAVEPLLRASTGRMVFGALESSNVNVAATMAQMMQALNAYEANQRVAQSVDSMLNVA 393 Query: 238 IRNIA 242 +I Sbjct: 394 ATDIG 398 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 32/208 (15%), Positives = 61/208 (29%), Gaps = 15/208 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTI-----------KVKFSEVVGAIK 49 M + A ++ +++N++N +T GF+ ++S G+ Sbjct: 1 MIQGLTAAASGMAAEDRLEQLLSNNLANQETPGFKASIGELIEDPVFAMERYSYGDGSDG 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109 I + V + S G +TG LD A+ LT G K Sbjct: 61 IGIGEMGGGVDFQEGVPSFSEGGLETTGRPLDLAIVDTI---SSGEVAYALTPQGA-KPA 116 Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169 V A G+ M + + Q ++++ G + D S Sbjct: 117 AGPVTVGAGGRLTAGGMPLAVYGPDGQPVQGLFAVRNPSYQGSELLSEGGAPAYDASGRP 176 Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRG 197 + + E ++ G Sbjct: 177 SYVFENAAGQVVYTPGSETDDPYAIRVG 204 >gi|213025696|ref|ZP_03340143.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 93 Score = 68.4 bits (165), Expect = 8e-10, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 33/93 (35%), Gaps = 13/93 (13%) Query: 14 ALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------------QKISFVA 60 A + + +A+N++N T GF+ + F +++ Q + V Sbjct: 1 AQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQTTLPSGLQIGTGVR 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALE 93 G+ T D A++G +F + Sbjct: 61 PVATERLHSQGNLSQTNNSKDVAIKGQGFFQVM 93 >gi|296120817|ref|YP_003628595.1| flagellar basal body rod protein-like protein [Planctomyces limnophilus DSM 3776] gi|296013157|gb|ADG66396.1| Flagellar basal body rod protein-like protein [Planctomyces limnophilus DSM 3776] Length = 521 Score = 68.4 bits (165), Expect = 9e-10, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 69/207 (33%), Gaps = 15/207 (7%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 L NM+ T+G+R V +++ V + + G Sbjct: 292 IRVLRAAQHIHRQNMAQAKTIGYRRRVV-------QLQSHGTPLADQVPTLSTTIDPTPG 344 Query: 72 SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPI 131 +I T LD A++G WF + + +LTR G ++ L G + Sbjct: 345 EWIITERPLDLAIQGYGWFVVRHDQQQLLTRVGHLVWNENRQLAIEIGTRSYPLDPPIVA 404 Query: 132 QIPQKDEIFNVGEKGEISQKGKVIATMG---LYSVDMSQGFVRRENSGISP-----NIPP 183 + + + G ++++G + +V + + + + N+ Sbjct: 405 PEGCTQLLIEETGNVQAATAGSELSSLGVITMATVPDATQLLEKLPGLFATTGKSGNLTF 464 Query: 184 TPLEDLSGVTVKRGFLEDSNANSMYEM 210 E + G LE SN NS E+ Sbjct: 465 HTAETARSGKLIAGRLEQSNVNSELEL 491 >gi|288958564|ref|YP_003448905.1| flagellar hook protein [Azospirillum sp. B510] gi|288910872|dbj|BAI72361.1| flagellar hook protein [Azospirillum sp. B510] Length = 881 Score = 68.4 bits (165), Expect = 9e-10, Method: Composition-based stats. Identities = 10/100 (10%), Positives = 35/100 (35%), Gaps = 5/100 (5%) Query: 144 EKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGF 198 + + ++IA + + + + R + + + Sbjct: 778 MVNYDNGRSRMIAKVPIVTFNNPNALQRESGGVFVESEGAGKPNLNDPKLNGAGAMVANS 837 Query: 199 LEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 +E SN + E +MI + +++ ++ +++ + E + Sbjct: 838 VEASNVDIASEFTKMIVTQRGYSANAKVLTASDEMLQEVL 877 Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 24/142 (16%), Positives = 54/142 (38%), Gaps = 20/142 (14%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66 L +A + L ++DN++N T G++ + F +V + + V + ++ Sbjct: 9 SALMGLVAQSKALGNISDNIANASTAGYKRVDTTFQSMVLQ-SSPRNHAPGGVTARPSFM 67 Query: 67 SKEVGSFISTGTELDFALEGDAWFALES-------------------PRGIILTRDGRFK 107 + G+ S + A++G +F++ + TR G F+ Sbjct: 68 NDVQGNLTSVSSNTSAAIQGQGFFSVSRLDAQTAGTIGGATGGGATGSGPNVYTRLGDFQ 127 Query: 108 VTDDGSLVSASGKYPVLDMASV 129 ++ LV++SG + Sbjct: 128 LSRTRHLVNSSGFALNGWLVDP 149 >gi|148254600|ref|YP_001239185.1| flagellar hook protein FlgE [Bradyrhizobium sp. BTAi1] gi|146406773|gb|ABQ35279.1| putative flagellar hook protein FlgE [Bradyrhizobium sp. BTAi1] Length = 412 Score = 68.0 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 28/118 (23%), Positives = 51/118 (43%), Gaps = 4/118 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + + ++A A L+ ++DN+SN DT G++T F ++V A N V+ Sbjct: 6 ALSSAISALNAQSSSLAMISDNISNADTTGYKTTSGLFEQLVTASSNSKAYSSGGVSVSS 65 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWF----ALESPRGIILTRDGRFKVTDDGSLVSA 117 + G +T D A++G +F + + TR+G F + G L + Sbjct: 66 RTNITQQGLLATTTNATDVAIQGSGFFVATDSTSAGGETFYTRNGAFTTDNAGYLENN 123 Score = 49.9 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 14/101 (13%), Positives = 32/101 (31%), Gaps = 5/101 (4%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLED 201 + + I + + + G V N + + T+ LE Sbjct: 312 YSNGQTVPIYKIAVATFADPNGLVAHSNGMYTATATSGNATLQASGENGAGTIYGSELES 371 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S ++ + MI Q +++ + +I K I ++ Sbjct: 372 STTDTTGQFSNMISAQQAYSAASQVISAVNKMYDTLISSMR 412 >gi|219684534|ref|ZP_03539477.1| flagellar basal-body rod protein FlgC [Borrelia garinii PBr] gi|219685765|ref|ZP_03540576.1| flagellar basal-body rod protein FlgC [Borrelia garinii Far04] gi|219671896|gb|EED28950.1| flagellar basal-body rod protein FlgC [Borrelia garinii PBr] gi|219672704|gb|EED29732.1| flagellar basal-body rod protein FlgC [Borrelia garinii Far04] Length = 152 Score = 68.0 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 26/47 (55%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G++E N N + EM MI ++ + + +T+I+ ++ A+ + S Sbjct: 106 GYVELPNVNLVEEMVDMISASRAYEANSTVINSSKSMFRSALAILQS 152 Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 10/46 (21%), Positives = 22/46 (47%), Gaps = 6/46 (13%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFS 42 +S N+ A R+ +++N++N T G +R ++ F+ Sbjct: 5 SSINVASTGLTAQRLRIDVISNNIANVSTSRTPDGGPYRRQRIIFA 50 >gi|114799551|ref|YP_758981.1| flagellar hook protein FlgE [Hyphomonas neptunium ATCC 15444] gi|114739725|gb|ABI77850.1| flagellar hook protein FlgE [Hyphomonas neptunium ATCC 15444] Length = 434 Score = 68.0 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 37/165 (22%), Positives = 60/165 (36%), Gaps = 10/165 (6%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 +S N G+ RL+T++DN++N+ T G++ V FS +V K V Sbjct: 5 SSLNAGVMGLSVNGTRLATISDNIANSGTYGYKRSAVDFSSMVLQQKTSAYAAG-GVRVD 63 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALES---------PRGIILTRDGRFKVTDDGS 113 GS I TG+ D A+ G + R ++LT G F ++G Sbjct: 64 TYKDIAATGSLIRTGSATDVAISGRGLLPVTDLDGTTNLASNRNMMLTPTGSFFADENGY 123 Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158 L + SG + + A + + AT Sbjct: 124 LRTQSGLFLLGWAADSSGGVGNVSRNSGANLVPVNISTSQFNATP 168 Score = 62.2 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 21/205 (10%), Positives = 56/205 (27%), Gaps = 12/205 (5%) Query: 43 EVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTR 102 + G + + + + G D A + P + + R Sbjct: 231 DSAGDPLTSVGDLALTFNDSPTAGGRIASATAANGATYDPATGRVSLTLDHGPVEVFIGR 290 Query: 103 ---DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG 159 +A K I+I ++ + + +KG + + + Sbjct: 291 PNDSAGITQLAASFAPTAVTKNGSPIGDLQSIEIDEQGFLQAIYDKGFR----RTLYQIP 346 Query: 160 LYSVDMSQGFVRRENSGISPNIPP-----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMI 214 + V G ++ S + + L +S + E+ +I Sbjct: 347 VGDVPNMNGLRALDSQAYSVSNSSGNLYLWDAGSGPVGGISGYSLMESTTDIASELTDLI 406 Query: 215 HLTQKFNSITTLIDENEKSMLEAIR 239 + ++S ++ ++ + E Sbjct: 407 ETQRAYSSNAKIVQTVDEMLQETTN 431 >gi|15639388|ref|NP_218837.1| flagellar basal body rod protein FlgC [Treponema pallidum subsp. pallidum str. Nichols] gi|189025630|ref|YP_001933402.1| flagellar basal body rod protein FlgC [Treponema pallidum subsp. pallidum SS14] gi|3322680|gb|AAC65385.1| flagellar basal-body rod protein (flgC) [Treponema pallidum subsp. pallidum str. Nichols] gi|189018205|gb|ACD70823.1| flagellar basal-body rod protein [Treponema pallidum subsp. pallidum SS14] Length = 129 Score = 67.6 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 11/67 (16%), Positives = 30/67 (44%) Query: 172 RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 +++ S + D K G++E N + + EM +I ++ + + ++I ++ Sbjct: 59 EKDNAPSRLVYDPTHPDAILSGPKAGYVEYPNVDIVTEMVDLISASRAYEANISVISGSK 118 Query: 232 KSMLEAI 238 + A+ Sbjct: 119 EMFQRAL 125 >gi|330721008|gb|EGG99169.1| Flagellar hook protein FlgE [gamma proteobacterium IMCC2047] Length = 92 Score = 67.6 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 12/90 (13%), Positives = 33/90 (36%), Gaps = 5/90 (5%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYE 209 + +GL + +G + N+ + + + ++ G LE+SN + E Sbjct: 1 MGQVGLANFSNVEGLSPQGNTQWAETFDSGNPVVGTPGSASLGVLQSGALEESNVDLSAE 60 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + +I + + + I+ ++ Sbjct: 61 LVSLILAQRNYQANARAIETESAVTQAILQ 90 >gi|224531802|ref|ZP_03672434.1| flagellar basal-body rod protein FlgC [Borrelia valaisiana VS116] gi|224511267|gb|EEF81673.1| flagellar basal-body rod protein FlgC [Borrelia valaisiana VS116] Length = 152 Score = 67.6 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 26/47 (55%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G++E N N + EM MI ++ + + +T+I+ ++ A+ + S Sbjct: 106 GYVELPNVNLVEEMVDMISASRAYEANSTVINSSKSMFRSALAILQS 152 Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 10/46 (21%), Positives = 22/46 (47%), Gaps = 6/46 (13%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFS 42 +S N+ A R+ +++N++N T G +R ++ F+ Sbjct: 5 SSINVASTGLTAQRLRIDVISNNIANVSTSRTPDGGPYRRQRIIFA 50 >gi|224534284|ref|ZP_03674862.1| flagellar basal-body rod protein FlgC [Borrelia spielmanii A14S] gi|224514386|gb|EEF84702.1| flagellar basal-body rod protein FlgC [Borrelia spielmanii A14S] Length = 152 Score = 67.6 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 26/47 (55%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G++E N N + EM MI ++ + + +T+I+ ++ A+ + S Sbjct: 106 GYVELPNVNLVEEMVDMISASRAYEANSTVINSSKSMFRSALAILQS 152 Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 10/46 (21%), Positives = 22/46 (47%), Gaps = 6/46 (13%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFS 42 +S N+ A R+ +++N++N T G +R ++ F+ Sbjct: 5 SSINVASTGLTAQRLRIDVISNNIANVSTSRTPDGGPYRRQRIIFA 50 >gi|216264021|ref|ZP_03436015.1| flagellar basal-body rod protein FlgC [Borrelia afzelii ACA-1] gi|215980065|gb|EEC20887.1| flagellar basal-body rod protein FlgC [Borrelia afzelii ACA-1] Length = 152 Score = 67.6 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 26/47 (55%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G++E N N + EM MI ++ + + +T+I+ ++ A+ + S Sbjct: 106 GYVELPNVNLVEEMVDMISASRAYEANSTVINSSKSMFRSALAILQS 152 Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 10/46 (21%), Positives = 22/46 (47%), Gaps = 6/46 (13%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFS 42 +S N+ A R+ +++N++N T G +R ++ F+ Sbjct: 5 SSINVASTGLTAQRLRIDVISNNIANVSTSRTPDGGPYRRQRIIFA 50 >gi|111115118|ref|YP_709736.1| flagellar basal body rod protein FlgC [Borrelia afzelii PKo] gi|110890392|gb|ABH01560.1| flagellar basal-body rod protein [Borrelia afzelii PKo] Length = 152 Score = 67.6 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 26/47 (55%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G++E N N + EM MI ++ + + +T+I+ ++ A+ + S Sbjct: 106 GYVELPNVNLVEEMVDMISASRAYEANSTVINSSKSMFRSALAILQS 152 Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 10/46 (21%), Positives = 22/46 (47%), Gaps = 6/46 (13%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFS 42 +S N+ A R+ +++N++N T G +R ++ F+ Sbjct: 5 SSINVASTGLTAQRLRIDVISNNIANVSTSRTPDGGPYRRQRIIFA 50 >gi|1448943|gb|AAB04619.1| flagellar basal body distal rod protein [Borrelia burgdorferi] Length = 152 Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 24/42 (57%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++E N N + EM MI ++ + + +T+I+ ++ A+ Sbjct: 106 GYVELPNVNLVEEMVDMISASRAYEANSTVINSSKSMFRSAL 147 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 7/29 (24%), Positives = 15/29 (51%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDT 31 +S N+ A R+ +++N++N T Sbjct: 5 SSINVASTGLTAQRLRIDVISNNIANVST 33 >gi|225552253|ref|ZP_03773193.1| flagellar basal-body rod protein FlgC [Borrelia sp. SV1] gi|225371251|gb|EEH00681.1| flagellar basal-body rod protein FlgC [Borrelia sp. SV1] Length = 152 Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 24/42 (57%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++E N N + EM MI ++ + + +T+I+ ++ A+ Sbjct: 106 GYVELPNVNLVEEMVDMISASRAYEANSTVINSSKSMFRSAL 147 Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 10/46 (21%), Positives = 22/46 (47%), Gaps = 6/46 (13%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFS 42 +S N+ A R+ +++N++N T G +R ++ F+ Sbjct: 5 SSINVASTGLAAQRLRIDVISNNIANVSTSRTPDGGPYRRQRIIFA 50 >gi|170737038|ref|YP_001778298.1| flagellar basal body FlaE domain-containing protein [Burkholderia cenocepacia MC0-3] gi|169819226|gb|ACA93808.1| flagellar basal body FlaE domain protein [Burkholderia cenocepacia MC0-3] Length = 389 Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 12/92 (13%), Positives = 31/92 (33%), Gaps = 5/92 (5%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRG-----FLEDSNANSMYE 209 + + + G V + SG + T G +E SN + E Sbjct: 298 AGQLAIATFQNENGLVPVDGSGWQASSATGEPLIGKPGTGMAGKLAVRAVEQSNVDMTAE 357 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 + ++ Q + + + ++ + M ++ + Sbjct: 358 LVSLMGAQQNYQANSKVLSTENEMMRALMQAL 389 Score = 62.2 bits (149), Expect = 6e-08, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 56/124 (45%), Gaps = 6/124 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SFNI LA A+ +L+ +++N++N+ T+GF++ + F+ S S Sbjct: 2 SFNIALAGINAINGQLNQISNNIANSGTLGFKSGRANFASSYINAMPSGVSIGSTSQSMD 61 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWF-ALESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 + +TG LD A+ G +F + ++ ++ +R G F + +G++ + Sbjct: 62 VTGNF-----SATGRGLDAAIAGKGFFISRDTDGSMVFSRAGVFNIDKNGNVTDFMSRVV 116 Query: 123 VLDM 126 Sbjct: 117 QGYG 120 >gi|15594638|ref|NP_212427.1| flagellar basal body rod protein FlgC [Borrelia burgdorferi B31] gi|195941353|ref|ZP_03086735.1| flagellar basal body rod protein FlgC [Borrelia burgdorferi 80a] gi|216264936|ref|ZP_03436928.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 156a] gi|218249308|ref|YP_002374816.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi ZS7] gi|221217671|ref|ZP_03589139.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 72a] gi|223888936|ref|ZP_03623527.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 64b] gi|224533191|ref|ZP_03673791.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi WI91-23] gi|224533682|ref|ZP_03674270.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi CA-11.2a] gi|225549042|ref|ZP_03770017.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 94a] gi|225550067|ref|ZP_03771027.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 118a] gi|226320594|ref|ZP_03796154.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 29805] gi|2494521|sp|Q57466|FLGC_BORBU RecName: Full=Flagellar basal-body rod protein flgC gi|1165277|gb|AAA85616.1| FlgC [Borrelia burgdorferi] gi|1196316|gb|AAB51408.1| flagellar basal body rod protein [Borrelia burgdorferi] gi|2688173|gb|AAC66655.1| flagellar basal-body rod protein (flgC) [Borrelia burgdorferi B31] gi|215981409|gb|EEC22216.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 156a] gi|218164496|gb|ACK74557.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi ZS7] gi|221192348|gb|EEE18567.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 72a] gi|223885752|gb|EEF56851.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 64b] gi|224511918|gb|EEF82319.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi WI91-23] gi|224512975|gb|EEF83338.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi CA-11.2a] gi|225369179|gb|EEG98632.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 118a] gi|225370268|gb|EEG99706.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 94a] gi|226234013|gb|EEH32734.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi 29805] gi|312147876|gb|ADQ30535.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi JD1] gi|312149272|gb|ADQ29343.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi N40] Length = 152 Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 24/42 (57%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++E N N + EM MI ++ + + +T+I+ ++ A+ Sbjct: 106 GYVELPNVNLVEEMVDMISASRAYEANSTVINSSKSMFRSAL 147 Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 10/46 (21%), Positives = 22/46 (47%), Gaps = 6/46 (13%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFS 42 +S N+ A R+ +++N++N T G +R ++ F+ Sbjct: 5 SSINVASTGLTAQRLRIDVISNNIANVSTSRTPDGGPYRRQRIIFA 50 >gi|226321611|ref|ZP_03797137.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi Bol26] gi|226232800|gb|EEH31553.1| flagellar basal-body rod protein FlgC [Borrelia burgdorferi Bol26] Length = 152 Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 24/42 (57%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++E N N + EM MI ++ + + +T+I+ ++ A+ Sbjct: 106 GYVELPNVNLVEEMVDMISASRAYEANSTVINSSKSMFRSAL 147 Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 10/46 (21%), Positives = 22/46 (47%), Gaps = 6/46 (13%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFS 42 +S N+ A R+ +++N++N T G +R ++ F+ Sbjct: 5 SSINVASTGLTAQRLRIDVISNNIANVSTSRTPDGGPYRRQRIIFA 50 >gi|315301942|ref|ZP_07872943.1| flagellar hook protein FlgE [Listeria ivanovii FSL F6-596] gi|313629684|gb|EFR97816.1| flagellar hook protein FlgE [Listeria ivanovii FSL F6-596] Length = 342 Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 21/175 (12%), Positives = 44/175 (25%), Gaps = 8/175 (4%) Query: 72 SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPI 131 ++ + G + A + I D ++ + + P D Sbjct: 170 NYNAQGELTNAAALRNIQINTTVNGKQI---DMDLNLSGLTNYGTNQVFSPTSDGKGAAT 226 Query: 132 QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-- 189 +A + + + G V+ N P + Sbjct: 227 VKDYAITDSGYIAVSYSDGTVIPVAQLAVATFSNEDGLVKMGNGEYVPGLSSGDAVYGVA 286 Query: 190 ---SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 + LE SN + E ++ F T +I + M + + I Sbjct: 287 GQNGAGGISGSSLEGSNVDLSREFVNLMTYQSGFQGNTKVIRVADDVMKQIVNLI 341 >gi|307748584|gb|ADN91854.1| Hypothetical protein CJM1_1678 [Campylobacter jejuni subsp. jejuni M1] Length = 88 Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 12/83 (14%), Positives = 30/83 (36%), Gaps = 5/83 (6%) Query: 162 SVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHL 216 SV + G + + T +K LE SN + + ++I + Sbjct: 3 SVANNSGLEEIGGNLFKVTANSGNIVVGEAGTGGRGEMKTSALEMSNVDLSRSLTELIII 62 Query: 217 TQKFNSITTLIDENEKSMLEAIR 239 + + + + I +++ + I+ Sbjct: 63 QRGYQANSKTISTSDQMLQTLIQ 85 >gi|255592000|ref|XP_002535648.1| Flagellar basal-body rod protein flgG, putative [Ricinus communis] gi|223522414|gb|EEF26735.1| Flagellar basal-body rod protein flgG, putative [Ricinus communis] Length = 230 Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 43/216 (19%), Positives = 65/216 (30%), Gaps = 17/216 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV---------------- 44 MQ + L + QRL N++N T G++ V + Sbjct: 1 MQEVLALALQSMQQDMQRLDRTGLNLANALTPGYQREVVSARPLRLGAPSFAAMVGTAAA 60 Query: 45 -VGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103 A + A G+ STG LD AL G +F + +P G TR Sbjct: 61 AAVADNAPAASPHAPAAGLLVQTDHRPGTLRSTGQNLDVALAGAGYFEVSTPGGPAYTRQ 120 Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 G F++ G LV+A G + + +Q Q L V Sbjct: 121 GSFRLDAQGRLVTAQGHAVMGRGGEILLQSSQVRIDAQGNIFDGDGVGRTDRPVAQLKVV 180 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFL 199 + Q R +I P + + L Sbjct: 181 EAPQPSQLRRLGEGLMSIDGQPGQLADADIRIQQAL 216 >gi|34497159|ref|NP_901374.1| flagellar hook protein flgE [Chromobacterium violaceum ATCC 12472] gi|34103016|gb|AAQ59379.1| flagellar hook protein flgE [Chromobacterium violaceum ATCC 12472] Length = 393 Score = 66.8 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 11/100 (11%), Positives = 34/100 (34%), Gaps = 5/100 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLED 201 + + +V+A + + + + + P + + LE Sbjct: 294 YSNDQKQVVARLAIANFANQGALTAASQTSWQESSASGPALLSPAGSNMAGKLVTSSLEQ 353 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 SN + E+ ++ + + + T +I + M ++ + Sbjct: 354 SNVDVTSELVSLMTAQRNYQANTKVISTENQVMQALMQAV 393 Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 6/125 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SF I L+ A+ +L +V+DN++N+ T GF++ +V F+ Q + A+ Sbjct: 2 SFEIALSGINAVNNQLGSVSDNIANSGTYGFKSGRVTFASAYA-----GSQAMGVNANPN 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALES-PRGIILTRDGRFKVTDDGSLVSASGKYP 122 G ++TG LD A++G ++ S + +R G F DG LV G Sbjct: 57 SQNIGRNGGLVNTGRALDAAIDGRGFYVSRSVAGAVSYSRVGIFDTDKDGYLVDNYGGRV 116 Query: 123 VLDMA 127 Sbjct: 117 QGYAQ 121 >gi|203284214|ref|YP_002221954.1| flagellar basal-body rod protein [Borrelia duttonii Ly] gi|203287753|ref|YP_002222768.1| flagellar basal-body rod protein [Borrelia recurrentis A1] gi|201083657|gb|ACH93248.1| flagellar basal-body rod protein [Borrelia duttonii Ly] gi|201084973|gb|ACH94547.1| flagellar basal-body rod protein [Borrelia recurrentis A1] Length = 154 Score = 66.8 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 10/45 (22%), Positives = 25/45 (55%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 G++E N N + EM MI ++ + + +++I+ ++ A+ + Sbjct: 108 GYVEFPNVNVVEEMVDMISASRAYEANSSVINSSKSMFRSALSIL 152 Score = 58.0 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 21/46 (45%), Gaps = 6/46 (13%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFS 42 +S N A RL +A+N++N +T +R ++ F+ Sbjct: 7 SSINTASTGLTAQRLRLDVIANNIANVETTRTADGGAYRRERIIFA 52 >gi|330943209|gb|EGH45616.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv. pisi str. 1704B] Length = 101 Score = 66.8 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 44/103 (42%), Gaps = 3/103 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + ++ A+N++N T GF + + + ++ ++ Sbjct: 1 MDKLLYVAMSGASENAIAQKAHANNLANVSTNGFMRDLEQARSM--PVFGEVMPSRAYAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTR 102 S + G+ + TG ELD A++GD W A+++P G TR Sbjct: 59 SERPGTDFSAGAMVQTGRELDIAVKGDGWIAVQTPDGGEAYTR 101 >gi|255323568|ref|ZP_05364698.1| flagellar hook protein [Campylobacter showae RM3277] gi|255299282|gb|EET78569.1| flagellar hook protein [Campylobacter showae RM3277] Length = 543 Score = 66.8 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 20/137 (14%), Positives = 44/137 (32%), Gaps = 10/137 (7%) Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV--IATMGLYSVDMSQGF 169 G ++ K + V I + + G G+V + + LY QG Sbjct: 403 GVTSTSQAKSISIAQDGVREGILKDYYTNDSGNILAQFTNGQVRSVGKVALYHFQNEQGL 462 Query: 170 VRRENSGISPNIPPTPLEDLSGV--------TVKRGFLEDSNANSMYEMGQMIHLTQKFN 221 + ++ S + + LE SN + + ++I + ++ Sbjct: 463 AKMGDNIYSQSANSGAAFFYKDAGGKSIYGAKLASSMLEQSNVDLAQALTEVIVTQKAYD 522 Query: 222 SITTLIDENEKSMLEAI 238 + I + + + AI Sbjct: 523 ANAKSITTSNEMLQRAI 539 Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 45/209 (21%), Positives = 75/209 (35%), Gaps = 9/209 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI----KNDIDQKI 56 M S G++ + A+N++N + VGF +F + N+ Q Sbjct: 1 MVRSLYNGVSGVRTQGFSMDVWANNIANINNVGFTASIPEFKSIFYQTSFAAGNNPTQDQ 60 Query: 57 SFVASGKEYL---SKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113 + + + G F+ T LD A+ G +F + + G TR G F V + Sbjct: 61 VGLGATGMTTALSFYKQGPFMKTDNVLDMAIGGKGFFGVTNGSGTYYTRAGSFGVDKERY 120 Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRE 173 LV+ G Y L + Q+ + T+G + D+ G + + Sbjct: 121 LVTNQGNYV-LGTQNTLTQVTPSQGAIEAFGRVNGRAAVTQAYTLGADTTDLDVGDIGSQ 179 Query: 174 NSGISPNIPPTPLEDLSGVTVKRGFLEDS 202 P P + S VT K G L+ S Sbjct: 180 GKIRLPEFLYLPTKPTSKVTFK-GNLDSS 207 >gi|24459279|gb|AAL86632.1| FlgG [Vibrio fischeri ES114] Length = 43 Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 23/43 (53%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 M + + A + ++T+++N++N TVGF+ + F + Sbjct: 1 MNPALWVSKTGLDAQQTNIATISNNLANASTVGFKKSRAVFED 43 >gi|328545575|ref|YP_004305684.1| FlgE protein [polymorphum gilvum SL003B-26A1] gi|326415316|gb|ADZ72379.1| FlgE protein [Polymorphum gilvum SL003B-26A1] Length = 418 Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 32/165 (19%), Positives = 61/165 (36%), Gaps = 7/165 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + N +++ A Q LS V+ N++N+ T ++ F+ +V V + Sbjct: 6 ALNSAISSLYAQSQALSNVSSNLANSQTTAYKASSTSFTSLVA---GTTSSSSGGVVAST 62 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWF---ALESPRGIILTRDGRFKVTDDGSLVSASGK 120 E G +S+ + A+EG +F + S TR+G F++ +G ++ G Sbjct: 63 RSSVSEQGLLVSSSSSTHLAIEGSGFFVVSSEVSGGQTYYTRNGEFEIDANG-YLTNGGY 121 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 Y + ++ S K V AT + Sbjct: 122 YLLGWATDASGNPVAGTSEASLVPIDVDSVKSSVGATSNVTMQAN 166 Score = 56.0 bits (133), Expect = 4e-06, Method: Composition-based stats. Identities = 12/97 (12%), Positives = 37/97 (38%), Gaps = 5/97 (5%) Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE-----DLSGVTVKRGFLEDSNAN 205 + +VI + + + + G N + + T+ G+LE S + Sbjct: 322 EQRVIYKIPVATFPNANGLTEMSNGIYARSSYSGNSTLHLAGTGGVGTINGGYLEASTTD 381 Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 + E +M+ Q +++ + ++ + + ++ + Sbjct: 382 TSTEFSRMLTAQQAYSAASQILSASNEMFQSLMQAVR 418 >gi|187918167|ref|YP_001883730.1| flagellar basal body rod protein FlgC [Borrelia hermsii DAH] gi|119861015|gb|AAX16810.1| flagellar basal-body rod protein FlgC [Borrelia hermsii DAH] Length = 152 Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 26/45 (57%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 G++E N N++ EM MI ++ + + +T+I+ ++ A+ + Sbjct: 106 GYVEFPNVNAVEEMVDMISASRAYEANSTVINSSKSMFRSALSIL 150 Score = 58.0 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 6/46 (13%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFS 42 +S N A RL +A+N++N +T +R +V F+ Sbjct: 5 SSINTASTGLTAQRLRLDVIANNIANVETTRTSEGGSYRRQRVIFA 50 >gi|51598553|ref|YP_072741.1| flagellar basal body rod protein FlgC [Borrelia garinii PBi] gi|51573124|gb|AAU07149.1| flagellar basal-body rod protein [Borrelia garinii PBi] Length = 152 Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 26/47 (55%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G++E N N + EM MI ++ + + +T+++ ++ A+ + S Sbjct: 106 GYVELPNVNLVEEMVDMISASRAYEANSTVVNSSKSMFRSALAILQS 152 Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 10/46 (21%), Positives = 22/46 (47%), Gaps = 6/46 (13%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFS 42 +S N+ A R+ +++N++N T G +R ++ F+ Sbjct: 5 SSINVASTGLTAQRLRIDVISNNIANVSTSRTPDGGPYRRQRIIFA 50 >gi|255028363|ref|ZP_05300314.1| flagellar basal body rod protein FlgG [Listeria monocytogenes LO28] Length = 217 Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 60/181 (33%), Gaps = 14/181 (7%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV--------VGAIKNDID 53 IG A + Q + ++N++N T GF+ ++ + G + + Sbjct: 1 MKGLYIGAAGMMNYMQHIQVHSNNVANAQTPGFKFDQLTSEVISRNKVNYQNGPVTRQVG 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFAL------EGDAWFALESPRGIILTRDGRFK 107 V +++ GS T + DF + +G +F I L+R G+F Sbjct: 61 TIDYGVRPAATHINLTAGSSYITNRDRDFFMQDTDPTQGSNFFITAKNGEISLSRGGQFH 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 G L +A G + + ++ + + +G V +Q Sbjct: 121 SDQFGFLRTADGANLLSATGEAIQVGQKTSIRAEANGDLYNAETSQYLGRLGTKFVSANQ 180 Query: 168 G 168 Sbjct: 181 A 181 >gi|304321120|ref|YP_003854763.1| putative flagellar hook protein [Parvularcula bermudensis HTCC2503] gi|303300022|gb|ADM09621.1| putative flagellar hook protein [Parvularcula bermudensis HTCC2503] Length = 446 Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 37/168 (22%), Positives = 63/168 (37%), Gaps = 10/168 (5%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 +S N G+A +L+ +ADN+SN++T+G++ +F +V + V + Sbjct: 5 SSLNAGVAGLATNAVKLAAIADNISNSETIGYKRAVAEFQSLVIDSGPNAYSAG-GVRAT 63 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALES---------PRGIILTRDGRFKVTDDGS 113 + GS I TG D A+ G + + R ++LT G F +DG Sbjct: 64 PYIDVDDQGSLIGTGNATDLAIAGRGLLPVTNQDGAQAVTAERQLLLTATGSFTPDEDGY 123 Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLY 161 L + SG + + A I + AT Sbjct: 124 LRTTSGLFLLGFPADSNGDIGTVSRQSTESLEPVRVNVSNFTATPTEN 171 Score = 59.9 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 14/123 (11%), Positives = 37/123 (30%), Gaps = 5/123 (4%) Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 D A + + + + + + + + + + V G S Sbjct: 319 YSLTKDGAEIGNLLDFEVDGQGNLDAVFDTGFRRTLYKIPVADVPNLNGLEAANASAYKV 378 Query: 180 NIPP-----TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 + D + L +S + E+ Q+I + ++S +I ++ + Sbjct: 379 SQSSGDLYLWDAGDGPTGEMAGFSLMESTVDVANELTQLIQTQRAYSSNAKIIQTVDEIL 438 Query: 235 LEA 237 E Sbjct: 439 QET 441 >gi|291059787|gb|ADD72522.1| flagellar basal-body rod protein FlgC [Treponema pallidum subsp. pallidum str. Chicago] Length = 152 Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 11/67 (16%), Positives = 30/67 (44%) Query: 172 RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 +++ S + D K G++E N + + EM +I ++ + + ++I ++ Sbjct: 82 EKDNAPSRLVYDPTHPDAILSGPKAGYVEYPNVDIVTEMVDLISASRAYEANISVISGSK 141 Query: 232 KSMLEAI 238 + A+ Sbjct: 142 EMFQRAL 148 Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 18/44 (40%), Gaps = 6/44 (13%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVK 40 + NI A R ++DN++N + G FR +V Sbjct: 6 SGINIAATGMSAQRLRADVISDNIANASSTRTQEGGVFRRSRVV 49 >gi|213421609|ref|ZP_03354675.1| flagellar hook protein FlgE [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 147 Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 15/142 (10%), Positives = 44/142 (30%), Gaps = 5/142 (3%) Query: 98 IILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157 T F + + + + + + + +++ +V+ Sbjct: 6 TAATFSLSFLNSMQQNTGANNIVATNQNGYKPGDLVSYQINNDGTVVGNYSNEQEQVLGQ 65 Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLEDSNANSMYEMGQ 212 + L + ++G + ++ + + + G LE SN + E+ Sbjct: 66 IVLANFANNEGLASQGDNVWAATQASGVALLGTAGSGNFGKLTNGALEASNVDLSKELVN 125 Query: 213 MIHLTQKFNSITTLIDENEKSM 234 MI + + S I ++ + Sbjct: 126 MIVAQRNYQSNAQTIKTQDQIL 147 >gi|262364765|gb|ACY61322.1| flagellar hook protein [Yersinia pestis D182038] Length = 104 Score = 65.7 bits (158), Expect = 5e-09, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 33/85 (38%), Gaps = 5/85 (5%) Query: 162 SVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHL 216 + G V + + S + + T ++ G LE+SN + E+ ++ Sbjct: 20 NFASPSGLVTQNGTSWSESNKSGAALLGTPGTGLLGSLESGALENSNVDITAELVGLMTA 79 Query: 217 TQKFNSITTLIDENEKSMLEAIRNI 241 + + + T +I N+ M + + Sbjct: 80 QRNYQASTKIISTNDSMMNALFQVL 104 >gi|260772274|ref|ZP_05881190.1| flagellar hook protein FlgE [Vibrio metschnikovii CIP 69.14] gi|260611413|gb|EEX36616.1| flagellar hook protein FlgE [Vibrio metschnikovii CIP 69.14] Length = 356 Score = 65.3 bits (157), Expect = 7e-09, Method: Composition-based stats. Identities = 15/122 (12%), Positives = 38/122 (31%), Gaps = 5/122 (4%) Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 D A+ + + + + + + + V QG ++ + Sbjct: 233 DQDGATTGFLTKIDFDEYGSVLATYSNGQNVTLGRVAMVRVANEQGLDKKGGTQWDSTQQ 292 Query: 183 -----PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 S T+ G LE SN + E+ +I + F + + ++ + Sbjct: 293 SGVKIWGESSKGSFGTISNGVLEQSNIDMTQELVDLISAQRNFQANSRALEVHTGLQQTI 352 Query: 238 IR 239 ++ Sbjct: 353 LQ 354 >gi|255030384|ref|ZP_05302335.1| flagellar hook protein FlgE [Listeria monocytogenes LO28] Length = 189 Score = 65.3 bits (157), Expect = 7e-09, Method: Composition-based stats. Identities = 17/125 (13%), Positives = 31/125 (24%), Gaps = 5/125 (4%) Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 P D +A + + + G V+ N P + Sbjct: 64 PTSDGKGAATVKDYAVTDSGYIAVSYSDGTVIPVAQLAVATFSNEDGLVKMGNGEYVPGL 123 Query: 182 PPTPLEDL-----SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + LE SN + E ++ F T +I + M + Sbjct: 124 SSGDAVYGVAGQNGAGGISGSSLEGSNVDLSREFVNLMTYQSGFQGNTKVIRVADDVMKQ 183 Query: 237 AIRNI 241 + I Sbjct: 184 IVNLI 188 >gi|306820111|ref|ZP_07453759.1| flagellar basal-body rod protein FlgC [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551889|gb|EFM39832.1| flagellar basal-body rod protein FlgC [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 145 Score = 65.3 bits (157), Expect = 8e-09, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 30/71 (42%), Gaps = 6/71 (8%) Query: 168 GFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 G V ++ P P D + G+++ N + EM MI + + + T + Sbjct: 77 GIVEDKSDFKLRYDPGHPDADEN------GYVKMPNVELITEMVDMITAQRAYEANATAV 130 Query: 228 DENEKSMLEAI 238 + ++ + +AI Sbjct: 131 NTSKAMLQKAI 141 Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 19/47 (40%), Gaps = 6/47 (12%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43 + NI A A R+ ++ N++N T G ++ F E Sbjct: 5 SGMNINATALTAERLRMDIISKNIANAQTTRTKNGLPYKRQVAVFKE 51 >gi|237799210|ref|ZP_04587671.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022065|gb|EGI02122.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv. oryzae str. 1_6] Length = 122 Score = 64.9 bits (156), Expect = 8e-09, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 34/72 (47%) Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 + + G+ P + + V V+ GFL+ SN N++ EM ++ L+++F ++ Sbjct: 48 MEKGPDGLIHTKTGRPADADATVQVESGFLQASNVNAVEEMTSVLALSRQFELHVKMMKT 107 Query: 230 NEKSMLEAIRNI 241 E+ R + Sbjct: 108 AEEDDQSMARVL 119 >gi|315301940|ref|ZP_07872942.1| flagellar basal-body rod protein FlgG [Listeria ivanovii FSL F6-596] gi|313629693|gb|EFR97824.1| flagellar basal-body rod protein FlgG [Listeria ivanovii FSL F6-596] Length = 74 Score = 64.9 bits (156), Expect = 9e-09, Method: Composition-based stats. Identities = 11/66 (16%), Positives = 28/66 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + ++ A +Q LS ++N++N +T G++ V F++++ + Sbjct: 1 MNQTMYTAISGMNAFQQALSVTSNNIANANTTGYKKQSVVFNDLLYQNTMGSVAGGLYAG 60 Query: 61 SGKEYL 66 + Sbjct: 61 TNPMSF 66 >gi|119953092|ref|YP_945301.1| flagellar basal body rod protein FlgC [Borrelia turicatae 91E135] gi|119861863|gb|AAX17631.1| flagellar basal-body rod protein FlgC [Borrelia turicatae 91E135] Length = 152 Score = 64.9 bits (156), Expect = 9e-09, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 28/47 (59%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 ++G++E N N++ EM MI ++ + + +T+I+ ++ A+ + Sbjct: 104 RKGYVEFPNVNAVEEMVDMISASRAYEANSTVINSSKAIFRSALSIL 150 Score = 59.9 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 6/46 (13%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFS 42 +S N A RL +A+N++N +T +R ++ FS Sbjct: 5 SSINTAATGLTAQRLRLDVIANNIANVETTRTSEGGSYRRQRIVFS 50 >gi|330889084|gb|EGH21745.1| flagellar hook protein FlgE [Pseudomonas syringae pv. mori str. 301020] Length = 419 Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 33/99 (33%), Gaps = 5/99 (5%) Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED-----LSGVTVKRGFLE 200 G + K I + L S QG R ++ + + + + ++ LE Sbjct: 319 GFTNGMNKNIGQVILASFANPQGLQARSDTRWTESADSGVADYDVPGVGTLGSLIGDGLE 378 Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +N E+ +I + + + I M I+ Sbjct: 379 GANVVLADELIALIQAQTAYQANSKAISTEATVMQTLIQ 417 >gi|296133051|ref|YP_003640298.1| flagellar basal-body rod protein FlgC [Thermincola sp. JR] gi|296031629|gb|ADG82397.1| flagellar basal-body rod protein FlgC [Thermincola potens JR] Length = 145 Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 21/43 (48%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 +G++E N N + EM MI T+ + + I ++ +A Sbjct: 98 AQGYVEMPNVNIVTEMVDMISATRAYEANVASIRATKEMFAKA 140 Score = 52.6 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 22/49 (44%), Gaps = 6/49 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43 M SF+I + A R+ +++N++N +T G +R F Sbjct: 3 MFDSFDISASGLTAQRLRMDLISENIANVNTTRTASGGPYRRKLAVFEA 51 >gi|320535379|ref|ZP_08035493.1| flagellar basal-body rod protein FlgC [Treponema phagedenis F0421] gi|320147781|gb|EFW39283.1| flagellar basal-body rod protein FlgC [Treponema phagedenis F0421] Length = 152 Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 12/71 (16%), Positives = 30/71 (42%), Gaps = 1/71 (1%) Query: 172 RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 +++ S + D G++E N N + EM +I ++ + + ++I ++ Sbjct: 82 EKDNAPSRLVYDPNHPDAIKSGPNAGYVEYPNVNIVTEMVDLISASRAYEANASVILGSK 141 Query: 232 KSMLEAIRNIA 242 + A+ I Sbjct: 142 EMFQRAL-EIG 151 Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 7/50 (14%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G---FRTIKVKFSE 43 M +S NI A R ++DN++N + G F+ +V SE Sbjct: 3 MFSSINIAATGMSAERLRTDVISDNIANASSTRTQEGEGPFKRSRVILSE 52 >gi|237817504|ref|ZP_04596494.1| flagellar hook protein FlgE [Brucella abortus str. 2308 A] gi|237787259|gb|EEP61477.1| flagellar hook protein FlgE [Brucella abortus str. 2308 A] Length = 106 Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 3/64 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M G++ A RLSTVADN++N TVG++ + +FS +V S + Sbjct: 6 MMR---TGVSGMNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAGQYNSGSVLT 62 Query: 61 SGKE 64 + Sbjct: 63 DVRY 66 >gi|289804815|ref|ZP_06535444.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 134 Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 21/132 (15%), Positives = 39/132 (29%), Gaps = 7/132 (5%) Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169 + G + G + + D V G + K++ G G Sbjct: 6 EGGPITVPEGSEITIAADGTISALNPGDPPNTVAPVGRL----KLVKAEGNEVQRSDDGL 61 Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 R + L + + G LE SN + M MI ++F +I Sbjct: 62 FRLTAEAQAE--RGAVLAADPSIRIMSGVLEGSNVKPVEAMTDMIANARRFEMQMKVITS 119 Query: 230 NEKSMLEAIRNI 241 +++ A + Sbjct: 120 VDENEGRA-NQL 130 >gi|256043052|ref|ZP_05445997.1| flagellar basal body rod protein FlgF [Brucella melitensis bv. 1 str. Rev.1] Length = 70 Score = 64.1 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 41/67 (61%) Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + P+ P P+ D + V V +G +E SN ++M EM ++I +++ F + L+ + E ++ E Sbjct: 1 MIPSKPAQPVVDDNSVGVVQGMIEGSNVDAMTEMTRLISISRAFEQVNNLLSQQEATVSE 60 Query: 237 AIRNIAS 243 AI+ + S Sbjct: 61 AIKTLGS 67 >gi|226225740|ref|YP_002759846.1| flagellar basal-body rod protein FlgC [Gemmatimonas aurantiaca T-27] gi|226088931|dbj|BAH37376.1| flagellar basal-body rod protein FlgC [Gemmatimonas aurantiaca T-27] Length = 183 Score = 64.1 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 30/238 (12%), Positives = 61/238 (25%), Gaps = 60/238 (25%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M S I + A QR+ T+A N++N D Sbjct: 4 MFKSMGIAASGISAQRQRMETIAQNIANADVT---------------------------- 35 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + + L+ A +A F G Sbjct: 36 -----RGTDGTPYKRREVVLESATAQNALF------------------NPGNVTAQTLGN 72 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 V + + I + F V V+ V G + G Sbjct: 73 QNVAGAPAFEVPITDAAQTFQVPVLPVTGGADGVMGGEFGVRV---AGVAEDQGEGRLVY 129 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 P P D + G++ + ++ E+ +++ + + + + + + A+ Sbjct: 130 EPGHPDADGN------GYVRYPDIDTTQELVKLMDAKRIYEANAAVFQTAKSMLRAAL 181 >gi|126653431|ref|ZP_01725527.1| flagellar hook-basal body protein [Bacillus sp. B14905] gi|126589787|gb|EAZ83920.1| flagellar hook-basal body protein [Bacillus sp. B14905] Length = 125 Score = 64.1 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 25/125 (20%), Positives = 51/125 (40%), Gaps = 18/125 (14%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--------- 51 M + L+ +L T+++N++N++T GF+ + F+E++ N+ Sbjct: 1 MLRTMITATNTMGQLQNKLDTISNNIANSNTTGFKAKEASFNELLYQQFNNDKLDRAERQ 60 Query: 52 ---IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA------LESPRGIILTR 102 + S G+ +++ GS +T +LD A + E+ + TR Sbjct: 61 TPVGIRYGSGAMLGQIKSNQKQGSLQTTNRDLDLAFTTAKQYFNILMPNGENGTETVYTR 120 Query: 103 DGRFK 107 G F Sbjct: 121 QGDFY 125 >gi|224418355|ref|ZP_03656361.1| flagellar hook protein FlgE [Helicobacter canadensis MIT 98-5491] Length = 727 Score = 64.1 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 32/105 (30%), Gaps = 18/105 (17%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL------------------SGVTV 194 + I +G+ + QG + + N E V Sbjct: 619 EPIGRIGIAAFVNDQGLSKVGGNLFKMNAMTINGETSVVSGPPLLAWEETGNASLKYGQV 678 Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 LE SN ++ + +I + + I ++ M EAI+ Sbjct: 679 LDHMLETSNVDTGTALTDLIVYQRGYQMSAKSITTADQLMQEAIQ 723 >gi|332297607|ref|YP_004439529.1| flagellar basal-body rod protein FlgC [Treponema brennaborense DSM 12168] gi|332180710|gb|AEE16398.1| flagellar basal-body rod protein FlgC [Treponema brennaborense DSM 12168] Length = 151 Score = 64.1 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 30/69 (43%), Gaps = 2/69 (2%) Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 V+ G P P SG G++E N N + EM +I ++ + + +++I Sbjct: 81 VKDTAQGRMVYDPSHPDAIQSGPN--AGYVEYPNVNIVNEMVDLISASRAYEANSSVIQG 138 Query: 230 NEKSMLEAI 238 ++ A+ Sbjct: 139 SKDMFSSAL 147 Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 8/29 (27%), Positives = 12/29 (41%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTV 32 S NI R ++DN++N T Sbjct: 6 SINIAATGMSVERLRTDVISDNIANASTT 34 >gi|257457889|ref|ZP_05623048.1| flagellar basal-body rod protein FlgC [Treponema vincentii ATCC 35580] gi|257444602|gb|EEV19686.1| flagellar basal-body rod protein FlgC [Treponema vincentii ATCC 35580] Length = 151 Score = 64.1 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 31/75 (41%), Gaps = 3/75 (4%) Query: 168 GFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 G + + P P +SG G++E N N + EM +I ++ + + ++ Sbjct: 79 GIEKDNSEPRLSYEPDHPHAIVSGPK--AGYVEYPNVNIVTEMVDLISASRSYEANAAVV 136 Query: 228 DENEKSMLEAIRNIA 242 +++ A+ I Sbjct: 137 QGSKEMFQRAL-EIG 150 Score = 52.2 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 10/69 (14%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56 +S NI A R ++DN++N T FR +V ++ + ID ++ Sbjct: 5 SSINIAATGMSAERLRTDVISDNIANASTTSSQEGGYFRRSRV----ILAQKNDGIDWRL 60 Query: 57 SFVASGKEY 65 FV S + Sbjct: 61 PFVPSDMDR 69 >gi|531462|gb|AAA67880.1| orfG [Bacillus subtilis subsp. subtilis str. 168] Length = 135 Score = 64.1 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 16/126 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M S L+Q++ T++ N+SN++T G++ FSE+V + +D+K VA Sbjct: 1 MLRSMLTASTTLNQLQQQIDTISSNLSNSNTTGYKAKDTNFSELVRQQFDQVDEKNEEVA 60 Query: 61 SGKEYLS---------------KEVGSFISTGTELDFALEGDA-WFALESPRGIILTRDG 104 ++ + GS T +LD A + + TRDG Sbjct: 61 KARKTPPGLRLGVGAMMSSRLVSDQGSIQKTDRDLDIAFTSPYQYLQVNVNGNRQYTRDG 120 Query: 105 RFKVTD 110 VT Sbjct: 121 ALYVTP 126 >gi|158604896|gb|ABW74721.1| flagellar hook protein [Campylobacter concisus 13826] Length = 533 Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 15/106 (14%), Positives = 36/106 (33%), Gaps = 8/106 (7%) Query: 142 VGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP--------PTPLEDLSGVT 193 + + +A + LY QG + ++ E + G Sbjct: 425 NIMANFDNTRAFPVAKVALYHFINDQGVAKVGDNLYEATANSGEPFFYKNKAGETVYGAQ 484 Query: 194 VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + LE SN + + ++I + + + I +++ + AI+ Sbjct: 485 ILANKLEMSNVDLGQALSEVIVTQKAYEASAKSITTSDEMIQTAIQ 530 Score = 58.7 bits (140), Expect = 6e-07, Method: Composition-based stats. Identities = 31/132 (23%), Positives = 49/132 (37%), Gaps = 7/132 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI------KNDIDQ 54 M F G++ + ++N+SN + VGF+ +F ++ DQ Sbjct: 1 MMRGFYNGVSGIKTQSFGMDVWSNNISNINNVGFKASIPEFKNLINQNLVSAGSGPTSDQ 60 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF-ALESPRGIILTRDGRFKVTDDGS 113 L GSF ST D A+ GD +F ++ TR G F + G+ Sbjct: 61 VGLGATKQTTALDMSNGSFQSTDNNFDLAIGGDGFFGVVDKTGKNYYTRTGTFDIDAAGN 120 Query: 114 LVSASGKYPVLD 125 LV G + Sbjct: 121 LVDTRGNLLLGT 132 >gi|257484945|ref|ZP_05638986.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 126 Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 34/72 (47%) Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 + + G+ P + + V V+ GFL+ SN N++ EM ++ L+++F ++ Sbjct: 52 MEKGPDGLIHTKTGRPADADATVQVESGFLQASNVNAVEEMTSVLALSRQFELHVKMMKT 111 Query: 230 NEKSMLEAIRNI 241 E+ R + Sbjct: 112 AEEDDQSMARVL 123 >gi|328947992|ref|YP_004365329.1| flagellar basal-body rod protein FlgC [Treponema succinifaciens DSM 2489] gi|328448316|gb|AEB14032.1| flagellar basal-body rod protein FlgC [Treponema succinifaciens DSM 2489] Length = 153 Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 3/74 (4%) Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 ++ G P P SG +G++E N N + EM MI + + + +++I Sbjct: 82 IKDSEQGRMVYDPSHPDAIQSGPN--KGYVEYPNVNIVNEMVNMISANRAYEANSSVIQG 139 Query: 230 NEKSMLEAIRNIAS 243 +++ A+ IAS Sbjct: 140 SKEMFASAL-EIAS 152 Score = 45.6 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 7/29 (24%), Positives = 12/29 (41%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTV 32 S NI R +++N++N T Sbjct: 6 SINIAATGMSVERLRTDVISNNIANATTT 34 >gi|313141887|ref|ZP_07804080.1| flagellar hook protein FlgE [Helicobacter canadensis MIT 98-5491] gi|313130918|gb|EFR48535.1| flagellar hook protein FlgE [Helicobacter canadensis MIT 98-5491] Length = 708 Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 32/105 (30%), Gaps = 18/105 (17%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL------------------SGVTV 194 + I +G+ + QG + + N E V Sbjct: 600 EPIGRIGIAAFVNDQGLSKVGGNLFKMNAMTINGETSVVSGPPLLAWEETGNASLKYGQV 659 Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 LE SN ++ + +I + + I ++ M EAI+ Sbjct: 660 LDHMLETSNVDTGTALTDLIVYQRGYQMSAKSITTADQLMQEAIQ 704 >gi|256370963|ref|YP_003108787.1| protein of unknown function DUF1078 domain protein [Acidimicrobium ferrooxidans DSM 10331] gi|256007547|gb|ACU53114.1| protein of unknown function DUF1078 domain protein [Acidimicrobium ferrooxidans DSM 10331] Length = 431 Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 30/149 (20%), Positives = 65/149 (43%), Gaps = 13/149 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS--- 57 M S + ++ A ++ L +A+N++N +T G+++ + +F++++ ++ + Sbjct: 1 MTKSLSSAISGIEANQEWLDNIANNIANANTTGYQSTQTEFADLLYQQQSAAGGPVPGQT 60 Query: 58 ----------FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107 V G+ + TGT D A++G + + TRDG + Sbjct: 61 GGTNPLVVGSGVRVSATPTDFSQGTIVQTGTSTDVAIQGQGFLVVNQGGQNYYTRDGALQ 120 Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQK 136 + G LV+ASG + + + Q+ Q Sbjct: 121 LDGAGQLVTASGALVMGWVPNAAGQVNQN 149 Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 25/193 (12%), Positives = 57/193 (29%), Gaps = 11/193 (5%) Query: 52 IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDD 111 D +++ + G + L L+ P +F + Sbjct: 243 FDPATGQISAISGTSTANPDQLALGGFPTSYDLPAGYAMNLDFPTPGTAQAVTQFAASSP 302 Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171 + V+ YP +A I E + +V+ + L +QG + Sbjct: 303 TAQVTNQNGYPSGALAGFTIGSDGVIEGTYANGR------TQVLGQIALAQFANAQGLSK 356 Query: 172 RENSGISPNIPPTPLEDLSGV-----TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 + N + + S + G LE SN + E+ ++ + + T + Sbjct: 357 QGNLLYAATTNSGAPQLGSPGAAGLGQLVGGALESSNVSIGSELTNLVVAQTDYQANTKV 416 Query: 227 IDENEKSMLEAIR 239 + + ++ Sbjct: 417 VQTTATVLQSLVQ 429 >gi|83593766|ref|YP_427518.1| hypothetical protein Rru_A2431 [Rhodospirillum rubrum ATCC 11170] gi|83576680|gb|ABC23231.1| Protein of unknown function DUF1078 [Rhodospirillum rubrum ATCC 11170] Length = 442 Score = 63.0 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 32/200 (16%), Positives = 57/200 (28%), Gaps = 9/200 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +F A + L ++ N++N +T G++ + F ++ + D V Sbjct: 6 AFTNSSMAMITQSHALGQISTNVANINTTGYKQVDTNFKTLLSESTANFD--FFGVKPVD 63 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRG----IILTRDGRFKVTDDGSLVS--A 117 E G ++TG LD A+ G F + TRDG F V Sbjct: 64 YRRVSEQGGLLTTGRNLDVAIGGQGLFMVNQQADLSGETFYTRDGSFGARVAKETVGKVV 123 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF-VRRENSG 176 +G + + D+ T+ R E G Sbjct: 124 AGNSYLSTQDGYYVMGWAADQAAVQAGTEPFPVNDTKTGTITGARALSPIQLNTRAEADG 183 Query: 177 ISPNIPPTPLEDLSGVTVKR 196 + + T + Sbjct: 184 QATTAAVVRANINALATTTQ 203 Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 24/70 (34%) Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 + R ++ I G TV G LE S + + +MI ++S T+ Sbjct: 367 KNLYRASDAAGESRIFSADSAASVGTTVTSGALEQSTVDLGDQFSKMITTQTAYSSSATV 426 Query: 227 IDENEKSMLE 236 ++ Sbjct: 427 FRTCDEMSQT 436 >gi|326402284|ref|YP_004282365.1| flagellar hook protein FlgE [Acidiphilium multivorum AIU301] gi|325049145|dbj|BAJ79483.1| flagellar hook protein FlgE [Acidiphilium multivorum AIU301] Length = 425 Score = 63.0 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 25/143 (17%), Positives = 54/143 (37%), Gaps = 16/143 (11%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + + ++ A + ++DN++N+ T+G++ + F+ + + V + Sbjct: 6 ALDTSVSGLQAQSSAFTNISDNIANSQTIGYKGVNTHFTNYLVQST-ASNNGPDSVVANP 64 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESP---------------RGIILTRDGRFKV 108 EY + G+ + L A+ G+ +F + P TR G F + Sbjct: 65 EYTNTVEGTITQSSNPLSLAINGNGYFNVSLPGPTTTTAGKTTQTFDAQQYYTRAGDFTL 124 Query: 109 TDDGSLVSASGKYPVLDMASVPI 131 G LV+ +G Y + Sbjct: 125 NSSGYLVNGAGAYLDGWSVNPTT 147 Score = 59.9 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 16/132 (12%), Positives = 41/132 (31%), Gaps = 6/132 (4%) Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171 G+ ++ G + + + + K IA + L S Sbjct: 293 GTSLNLQGVSQNGSPSGAFSNLSIDTQGNITANY--TNGFSKQIAQIPLASFASPDALQN 350 Query: 172 RENS----GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 + + SG + G +E+SN + + +I+ Q + + T ++ Sbjct: 351 KSGQIETATQASGAATINAVGGSGGALVTGSVENSNVDIATQFTDLINAQQAYTANTKVV 410 Query: 228 DENEKSMLEAIR 239 ++ + + Sbjct: 411 TAAQQILTTTVN 422 >gi|148259130|ref|YP_001233257.1| flagellar hook protein FlgE [Acidiphilium cryptum JF-5] gi|146400811|gb|ABQ29338.1| flagellar basal body FlaE domain protein [Acidiphilium cryptum JF-5] Length = 425 Score = 63.0 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 25/143 (17%), Positives = 54/143 (37%), Gaps = 16/143 (11%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + + ++ A + ++DN++N+ T+G++ + F+ + + V + Sbjct: 6 ALDTSVSGLQAQSSAFTNISDNIANSQTIGYKGVNTHFTNYLVQST-ASNNGPDSVVANP 64 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESP---------------RGIILTRDGRFKV 108 EY + G+ + L A+ G+ +F + P TR G F + Sbjct: 65 EYTNTVEGTITQSSNPLSLAINGNGYFNVSLPGPTTTTAGKTTQTFDAQQYYTRAGDFTL 124 Query: 109 TDDGSLVSASGKYPVLDMASVPI 131 G LV+ +G Y + Sbjct: 125 NSSGYLVNGAGAYLDGWSVNPTT 147 Score = 59.9 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 16/132 (12%), Positives = 41/132 (31%), Gaps = 6/132 (4%) Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171 G+ ++ G + + + + K IA + L S Sbjct: 293 GTSLNLQGVSQNGSPSGAFSNLSIDTQGNITANY--TNGFSKQIAQIPLASFASPDALQN 350 Query: 172 RENS----GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 + + SG + G +E+SN + + +I+ Q + + T ++ Sbjct: 351 KSGQIETATQASGAATINAVGGSGGALVTGSVENSNVDIATQFTDLINAQQAYTANTKVV 410 Query: 228 DENEKSMLEAIR 239 ++ + + Sbjct: 411 TAAQQILTTTVN 422 >gi|310659047|ref|YP_003936768.1| flagellar component of cell-proximal portion of basal-body rod [Clostridium sticklandii DSM 519] gi|308825825|emb|CBH21863.1| flagellar component of cell-proximal portion of basal-body rod [Clostridium sticklandii] Length = 146 Score = 63.0 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 27/46 (58%), Gaps = 1/46 (2%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G++ SN +++ EM MI T+ + + T ++ ++ +L+A+ I Sbjct: 101 GYVTMSNVDTITEMVDMISATRSYEANVTALNTSKSMLLKAL-EIG 145 Score = 51.8 bits (122), Expect = 8e-05, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 6/47 (12%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43 +S NI +A A R+ ++ N++N +T G +R V F E Sbjct: 5 SSINISASALTAERTRMDVISKNLANANTTRTQSGDPYRRQVVVFKE 51 >gi|170022971|ref|YP_001719476.1| flagellar basal body rod protein [Yersinia pseudotuberculosis YPIII] gi|169749505|gb|ACA67023.1| flagellar basal body rod protein [Yersinia pseudotuberculosis YPIII] Length = 102 Score = 62.6 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 5/87 (5%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 SF+I A A ++L+T+++N++N+ T GF+ + +FS + Q + SG Sbjct: 2 SFSIANTALNAHTEQLNTISNNIANSATKGFKASRTEFSSMYAQ-----SQPLGVAVSGV 56 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWF 90 + G TG LD A+ G +F Sbjct: 57 SQNISKDGQKEKTGMGLDLAISGGGFF 83 >gi|42526722|ref|NP_971820.1| flagellar basal body rod protein FlgC [Treponema denticola ATCC 35405] gi|41817037|gb|AAS11731.1| flagellar basal-body rod protein FlgC [Treponema denticola ATCC 35405] Length = 151 Score = 62.6 bits (150), Expect = 5e-08, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 21/42 (50%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++E N N + EM +I ++ + + +++ + A+ Sbjct: 106 GYVEYPNVNIVTEMVDLISASRAYEANLAVVNGAKDMFQRAL 147 Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 28/68 (41%), Gaps = 10/68 (14%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDIDQKIS 57 S NI R +++N++N ++ G F+ +V +VG K+ ID + Sbjct: 6 SINIAATGMGVERLRTDVISNNIANASSLETQEGGPFKRSRV----IVGQKKSGIDWQTP 61 Query: 58 FVASGKEY 65 F E Sbjct: 62 FTPQNVER 69 >gi|325473784|gb|EGC76972.1| FlgC protein [Treponema denticola F0402] Length = 151 Score = 62.6 bits (150), Expect = 5e-08, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 21/42 (50%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++E N N + EM +I ++ + + +++ + A+ Sbjct: 106 GYVEYPNVNIVTEMVDLISASRAYEANLAVVNGAKDMFQRAL 147 Score = 45.6 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 27/65 (41%), Gaps = 10/65 (15%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDIDQKIS 57 S NI R +++N++N ++ G F+ +V +VG K+ ID + Sbjct: 6 SINIAATGMGVERLRTDVISNNIANASSLETQEGGPFKRSRV----IVGQKKSGIDWQTP 61 Query: 58 FVASG 62 F Sbjct: 62 FTPQN 66 >gi|330955627|gb|EGH55887.1| flagellar hook protein FlgE [Pseudomonas syringae Cit 7] Length = 208 Score = 62.6 bits (150), Expect = 5e-08, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 30/98 (30%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLED 201 + K +VI L S QG + + + + + LE+ Sbjct: 109 YTNGKSQVIGQTSLTSFANVQGLAQAGGTNWRETFASGVPVSGAPQSGTLGYITGQALEE 168 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ +I + + I M I+ Sbjct: 169 SNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQTTIQ 206 >gi|159045788|ref|YP_001534582.1| flagellar basal body rod protein FlgC [Dinoroseobacter shibae DFL 12] gi|157913548|gb|ABV94981.1| flagellar basal-body rod protein FlgC [Dinoroseobacter shibae DFL 12] Length = 130 Score = 62.6 bits (150), Expect = 5e-08, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 30/79 (37%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 S + + +A QRL+ V+ N++N DT G++ + +F ++ + V+ Sbjct: 5 LKSMTVSASGLMAQAQRLNVVSQNIANVDTPGYQRKQAEFQQMFDTFDGTDGVAVLRVSL 64 Query: 62 GKEYLSKEVGSFISTGTEL 80 L + Sbjct: 65 DDSALKRIYDPSHPLADPT 83 Score = 41.0 bits (94), Expect = 0.15, Method: Composition-based stats. Identities = 19/131 (14%), Positives = 38/131 (29%), Gaps = 3/131 (2%) Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170 G L+ + MA I NV G ++ + + + Sbjct: 1 MGDLLKSMTVSASGLMAQAQRLNVVSQNIANVDTPGYQRKQAEFQQMFDTFDGTDGVAVL 60 Query: 171 RRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 R + P L+ T G+ E SN ++M E+ + + + D Sbjct: 61 RVSLDDSALKRIYDPSHPLADPT---GYYEGSNVSTMVEVADAREAQRSYEANLRSFDNA 117 Query: 231 EKSMLEAIRNI 241 + + + Sbjct: 118 RQMSRSLLELL 128 >gi|294827625|ref|NP_710527.2| flagellar basal body rod protein FlgC [Leptospira interrogans serovar Lai str. 56601] gi|293385469|gb|AAN47545.2| flagellar basal body rod protein FlgC [Leptospira interrogans serovar Lai str. 56601] Length = 153 Score = 62.2 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 23/42 (54%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++E N N + EM MI ++ + + +I+ ++ +A+ Sbjct: 107 GYVEMPNVNIVTEMTDMISASRSYEANVQMINGSKAMFNKAL 148 Score = 54.9 bits (130), Expect = 9e-06, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 27/65 (41%), Gaps = 7/65 (10%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNT----DTVG---FRTIKVKFSEVVGAIKNDIDQK 55 +S NI A R+ +++N++N+ +T G FR +V + + K Sbjct: 5 SSINISATGLSAQRLRMDVISNNIANSTTTRNTNGDGPFRRDRVVMTPINLRTKWRSPVY 64 Query: 56 ISFVA 60 V+ Sbjct: 65 PFGVS 69 >gi|116327145|ref|YP_796865.1| flagellar basal body rod protein FlgC [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116332198|ref|YP_801916.1| flagellar basal body rod protein FlgC [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116119889|gb|ABJ77932.1| Endoflagellar proximal basal body rod protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116125887|gb|ABJ77158.1| Endoflagellar proximal basal body rod protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 153 Score = 62.2 bits (149), Expect = 6e-08, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 23/42 (54%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++E N N + EM MI ++ + + +I+ ++ +A+ Sbjct: 107 GYVEMPNVNIVTEMTDMISASRSYEANVQMINGSKAMFNKAL 148 Score = 54.9 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 27/65 (41%), Gaps = 7/65 (10%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNT----DTVG---FRTIKVKFSEVVGAIKNDIDQK 55 +S NI A R+ +++N++N+ +T G FR +V + + + Sbjct: 5 SSINISATGLSAQRLRMDVISNNIANSTTTRNTNGDGPFRRDRVVMTPINLRTRWRSPVY 64 Query: 56 ISFVA 60 VA Sbjct: 65 PFGVA 69 >gi|45656202|ref|YP_000288.1| flagellar basal body rod protein FlgC [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45599436|gb|AAS68925.1| flagellar basal-body rod protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 155 Score = 62.2 bits (149), Expect = 6e-08, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 23/42 (54%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++E N N + EM MI ++ + + +I+ ++ +A+ Sbjct: 109 GYVEMPNVNIVTEMTDMISASRSYEANVQMINGSKAMFNKAL 150 Score = 54.9 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 27/65 (41%), Gaps = 7/65 (10%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNT----DTVG---FRTIKVKFSEVVGAIKNDIDQK 55 +S NI A R+ +++N++N+ +T G FR +V + + K Sbjct: 7 SSINISATGLSAQRLRMDVISNNIANSTTTRNTNGDGPFRRDRVVMTPINLRTKWRSPVY 66 Query: 56 ISFVA 60 V+ Sbjct: 67 PFGVS 71 >gi|309788144|ref|ZP_07682750.1| flagellar basal-body rod protein flgF [Shigella dysenteriae 1617] gi|308923996|gb|EFP69497.1| flagellar basal-body rod protein flgF [Shigella dysenteriae 1617] Length = 111 Score = 62.2 bits (149), Expect = 7e-08, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 36/113 (31%), Gaps = 2/113 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V ++ + V Sbjct: 1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGPSLPTRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113 + G T LD AL+ D W + F++ G+ Sbjct: 59 ASTPGADMTPGKMDYTSRPLDVALQQDGWPCRPLTAAKGIRVMAAFRLIPPGN 111 >gi|330809244|ref|YP_004353706.1| flagellar hook protein FlgE [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327377352|gb|AEA68702.1| putative flagellar hook protein FlgE [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 392 Score = 61.8 bits (148), Expect = 7e-08, Method: Composition-based stats. Identities = 10/87 (11%), Positives = 30/87 (34%), Gaps = 4/87 (4%) Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPL----EDLSGVTVKRGFLEDSNANSMYEMGQ 212 + L + NS + ++ G+LE SN + E G Sbjct: 301 QLALADFADESALIAGANSLYHTPSSMKAEFGRAGEKQFGRIQGGYLELSNVDLAQEFGD 360 Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIR 239 ++ + + + + + ++ + + + + Sbjct: 361 ILIIQRGYQASSRVMTVSNEMLEQLYN 387 Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 29/126 (23%), Positives = 52/126 (41%), Gaps = 6/126 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M +F G++ + + L V++N+SN +T G+R + N D + Sbjct: 1 MLQAFFNGMSGLFSFAKGLDNVSNNVSNMNTPGYRGS-----DTFYRAVNGQDGQSFGSG 55 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR-GIILTRDGRFKVTDDGSLVSASG 119 + + G TG + A+ G +F L + + TR G+F+V DG LV Sbjct: 56 IAGTQVRIKPGENRQTGNNTNVAINGAGYFVLRDEQGALSYTRAGQFEVDKDGYLVDTIS 115 Query: 120 KYPVLD 125 + + Sbjct: 116 QQRIAG 121 >gi|313673746|ref|YP_004051857.1| flagellar basal-body rod protein flgc [Calditerrivibrio nitroreducens DSM 19672] gi|312940502|gb|ADR19694.1| flagellar basal-body rod protein FlgC [Calditerrivibrio nitroreducens DSM 19672] Length = 134 Score = 61.8 bits (148), Expect = 8e-08, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 24/42 (57%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G+++ N N + EM MI ++ + + T+++ ++ + A+ Sbjct: 88 GYVQYPNVNPIEEMVNMIEASRSYEANVTVLNTAKQLAMRAL 129 Score = 58.3 bits (139), Expect = 9e-07, Method: Composition-based stats. Identities = 14/103 (13%), Positives = 29/103 (28%), Gaps = 6/103 (5%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDT----VG--FRTIKVKFSEVVGAIKNDIDQKI 56 N+ A R++ ++ N++N +T G ++ V F E++ + Sbjct: 5 NILNVAATGLSAQRIRINVISSNLANANTTKTETGEPYKRKDVVFKELLEGEYTGGVRVE 64 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 V K ++ K E Sbjct: 65 KVVEDKKPFVLKYEPGHPDANEEGYVQYPNVNPIEEMVNMIEA 107 >gi|307718596|ref|YP_003874128.1| hypothetical protein STHERM_c09080 [Spirochaeta thermophila DSM 6192] gi|306532321|gb|ADN01855.1| hypothetical protein STHERM_c09080 [Spirochaeta thermophila DSM 6192] gi|315186391|gb|EFU20151.1| flagellar basal-body rod protein FlgC [Spirochaeta thermophila DSM 6578] Length = 152 Score = 61.8 bits (148), Expect = 8e-08, Method: Composition-based stats. Identities = 10/46 (21%), Positives = 25/46 (54%), Gaps = 1/46 (2%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G++E N N + EM +I ++ + + +++ ++ L+A+ I Sbjct: 107 GYVEYPNVNIVNEMVDLIDASRAYEANLAVVNGSKTMFLKAL-EIG 151 Score = 61.0 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 19/44 (43%), Gaps = 6/44 (13%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFS 42 NI A R+ +++N++N T G FR +V F Sbjct: 7 INIAATGLTAQRLRMDVISNNIANATTTRTTEGGPFRRSRVVFR 50 >gi|260886629|ref|ZP_05897892.1| flagellar basal-body rod protein FlgC [Selenomonas sputigena ATCC 35185] gi|330839539|ref|YP_004414119.1| flagellar basal-body rod protein FlgC [Selenomonas sputigena ATCC 35185] gi|260863772|gb|EEX78272.1| flagellar basal-body rod protein FlgC [Selenomonas sputigena ATCC 35185] gi|329747303|gb|AEC00660.1| flagellar basal-body rod protein FlgC [Selenomonas sputigena ATCC 35185] Length = 147 Score = 61.8 bits (148), Expect = 9e-08, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++E N N + EM MI ++ + + T I+ + A+ Sbjct: 102 GYVERPNINIVQEMVDMITASRAYEANVTAINAAKGMAQNALN 144 Score = 49.9 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 6/32 (18%), Positives = 15/32 (46%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32 M + + A R+ +++N++N +T Sbjct: 3 MFGGIDASASGLTAERLRMDVISNNIANANTT 34 >gi|313650471|gb|EFS14878.1| flagellar basal-body rod protein flgF [Shigella flexneri 2a str. 2457T] gi|323165586|gb|EFZ51373.1| flagellar basal-body rod protein flgF [Shigella sonnei 53G] gi|332759653|gb|EGJ89958.1| flagellar basal-body rod protein flgF [Shigella flexneri 2747-71] gi|332761423|gb|EGJ91707.1| flagellar basal-body rod protein flgF [Shigella flexneri K-671] gi|333004887|gb|EGK24407.1| flagellar basal-body rod protein flgF [Shigella flexneri VA-6] gi|333005400|gb|EGK24918.1| flagellar basal-body rod protein flgF [Shigella flexneri K-218] gi|333019423|gb|EGK38706.1| flagellar basal-body rod protein flgF [Shigella flexneri K-304] Length = 132 Score = 61.8 bits (148), Expect = 9e-08, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 26/67 (38%), Gaps = 1/67 (1%) Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 S + L+ + V G LE SN N++ M MI ++F +I + + Sbjct: 63 SAETQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNA 122 Query: 235 LEAIRNI 241 A + Sbjct: 123 GRA-NQL 128 >gi|2105146|gb|AAB57897.1| FlgC [Treponema denticola] Length = 151 Score = 61.8 bits (148), Expect = 9e-08, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 21/42 (50%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++E N N + EM +I ++ + + +++ + A+ Sbjct: 106 GYVEYPNVNIVTEMVDLISASRAYEANLAVVNGAKDMFQRAL 147 Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 20/121 (16%), Positives = 43/121 (35%), Gaps = 13/121 (10%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDIDQKIS 57 S NI R +++N++N ++ G F+ +V +VG K+ ID + Sbjct: 6 SINIAATGMGVERLRTDVISNNIANASSLETQEGGPFKRSRV----IVGQKKSGIDWQTP 61 Query: 58 FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSA 117 F E E +S + + + P+ + + + ++V+ Sbjct: 62 FTPQNVERGVGEGVKVLSIEKDTS---DTVGFMIRTHPKALKYGPKEGYVEYPNVNIVTE 118 Query: 118 S 118 Sbjct: 119 M 119 >gi|330899402|gb|EGH30821.1| flagellar hook protein FlgE [Pseudomonas syringae pv. japonica str. M301072PT] Length = 93 Score = 61.4 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 15/91 (16%), Positives = 27/91 (29%), Gaps = 5/91 (5%) Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLEDSNANSMY 208 VI L S QG + + + + + LE+SN + Sbjct: 1 VIGQTSLTSFANVQGLAQAGGTNWRETFASGVPVSGAPQSGTLGYITGQALEESNVDLTM 60 Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E+ +I + + I M I+ Sbjct: 61 ELVNLIKAQSNYQANAKTISTQSTIMQTTIQ 91 >gi|289679028|ref|ZP_06499918.1| flagellar hook protein FlgE [Pseudomonas syringae pv. syringae FF5] Length = 159 Score = 61.4 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 30/98 (30%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLED 201 + K +VI L S QG + + + + + LE+ Sbjct: 60 YTNGKSQVIGQTSLTSFANVQGLAQAGGTNWRETFASGVPVSGAPQSGTLGYITGQALEE 119 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ +I + + I M I+ Sbjct: 120 SNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQTTIQ 157 >gi|313895871|ref|ZP_07829425.1| flagellar basal-body rod protein FlgC [Selenomonas sp. oral taxon 137 str. F0430] gi|312975296|gb|EFR40757.1| flagellar basal-body rod protein FlgC [Selenomonas sp. oral taxon 137 str. F0430] Length = 151 Score = 61.4 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G++E N N + EM MI ++ + + T I+ + + A+R I S Sbjct: 104 GYVERPNVNIVSEMVDMISASRGYEANATTINAAKSMVNAALR-IGS 149 Score = 52.6 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 8/48 (16%), Positives = 18/48 (37%), Gaps = 6/48 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFS 42 M + + A R+ +++N++N +T + V F Sbjct: 3 MFLGIDAAASGLTAERLRMDVISNNIANANTTRAQGGGAYHRRYVVFQ 50 >gi|289609890|emb|CBI60366.1| unnamed protein product [Sordaria macrospora] Length = 90 Score = 61.4 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 44/90 (48%), Gaps = 5/90 (5%) Query: 19 LSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS--GKEYLSKEVGSFIST 76 +++++ N++N T GF+ + +F++V+ + ++ + G+ + + Sbjct: 1 MASISHNLANVGTTGFKKSRAEFADVIASNLAVAPTQMVGSGTVVKGNRQQFGEGNLVQS 60 Query: 77 GTELDFALEGDAWF---ALESPRGIILTRD 103 + LD A+ GD +F + +G+ TR+ Sbjct: 61 SSSLDIAIAGDGFFALKPDPNKQGLAFTRN 90 >gi|167037671|ref|YP_001665249.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|167040332|ref|YP_001663317.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter sp. X514] gi|256750738|ref|ZP_05491623.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter ethanolicus CCSD1] gi|300914416|ref|ZP_07131732.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter sp. X561] gi|307264864|ref|ZP_07546426.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter wiegelii Rt8.B1] gi|307724348|ref|YP_003904099.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter sp. X513] gi|320116086|ref|YP_004186245.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|326389485|ref|ZP_08211052.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter ethanolicus JW 200] gi|166854572|gb|ABY92981.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter sp. X514] gi|166856505|gb|ABY94913.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|256750321|gb|EEU63340.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter ethanolicus CCSD1] gi|300889351|gb|EFK84497.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter sp. X561] gi|306920122|gb|EFN50334.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter wiegelii Rt8.B1] gi|307581409|gb|ADN54808.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter sp. X513] gi|319929177|gb|ADV79862.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|325994490|gb|EGD52915.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter ethanolicus JW 200] Length = 147 Score = 61.4 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 11/48 (22%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 + G++E N N + EM MI T+ + + T + ++ +++ I Sbjct: 99 QNGYVEYPNVNIVSEMVDMISATRAYEANVTAFNASKAMFQKSL-EIG 145 Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats. Identities = 8/30 (26%), Positives = 16/30 (53%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV 32 +S +I + A R+ +A N++N +T Sbjct: 5 SSMDISASGLTAERLRMDIIAQNIANVNTT 34 >gi|304438470|ref|ZP_07398410.1| flagellar basal-body rod protein FlgC [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304368553|gb|EFM22238.1| flagellar basal-body rod protein FlgC [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 151 Score = 61.4 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 21/135 (15%), Positives = 43/135 (31%), Gaps = 6/135 (4%) Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 R ++ + ++ + + + G S + M Sbjct: 18 RLRMDVISNNIANANTTRTQGGGAYHRRYVVFQPREKGHGIGFESFLARASNRMRPGDGV 77 Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224 + G G P P + G++E N N + EM MI ++ + + T Sbjct: 78 RAVGIRTDNTQGPLVYEPGHPDANAD------GYVERPNVNIVAEMVDMISASRGYEANT 131 Query: 225 TLIDENEKSMLEAIR 239 T I+ + + A+R Sbjct: 132 TTINAAKSMVNAALR 146 Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 8/48 (16%), Positives = 18/48 (37%), Gaps = 6/48 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFS 42 M + + A R+ +++N++N +T + V F Sbjct: 3 MFLGIDTAASGLTAERLRMDVISNNIANANTTRTQGGGAYHRRYVVFQ 50 >gi|309788145|ref|ZP_07682751.1| flagellar basal-body rod protein flgF [Shigella dysenteriae 1617] gi|308923997|gb|EFP69498.1| flagellar basal-body rod protein flgF [Shigella dysenteriae 1617] Length = 123 Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 26/67 (38%), Gaps = 1/67 (1%) Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 S S L+ + V G LE SN N++ M MI ++F +I + + Sbjct: 54 SAESQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNA 113 Query: 235 LEAIRNI 241 A + Sbjct: 114 GRA-NQL 119 >gi|330953722|gb|EGH53982.1| flagellar hook protein FlgE [Pseudomonas syringae Cit 7] Length = 162 Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 30/98 (30%), Gaps = 5/98 (5%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT-----PLEDLSGVTVKRGFLED 201 + K +VI L S QG + + + + + LE+ Sbjct: 63 YTNGKSQVIGQTSLTSFANVQGLAQAGGTNWRETFASGVPVSGAPQSGTLGYITGQALEE 122 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + E+ +I + + I M I+ Sbjct: 123 SNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQTTIQ 160 >gi|303240290|ref|ZP_07326809.1| flagellar basal-body rod protein FlgC [Acetivibrio cellulolyticus CD2] gi|302592200|gb|EFL61929.1| flagellar basal-body rod protein FlgC [Acetivibrio cellulolyticus CD2] Length = 146 Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 23/42 (54%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++E N + + EM MI T+ + + T I+ + ++A+ Sbjct: 101 GYVEMPNVDILTEMVNMISATRSYEANVTSINTTKSMAMKAL 142 Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 6/47 (12%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDT------VGFRTIKVKFSE 43 +S +IG + A R+ T++ N++N +T +R V F E Sbjct: 5 SSLDIGASGLTAQRLRMDTISQNIANANTTRTENGTAYRRKVVVFEE 51 >gi|289578436|ref|YP_003477063.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter italicus Ab9] gi|297544712|ref|YP_003677014.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|289528149|gb|ADD02501.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter italicus Ab9] gi|296842487|gb|ADH61003.1| flagellar basal-body rod protein FlgC [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 147 Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 11/48 (22%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 + G++E N N + EM MI T+ + + T + ++ +++ I Sbjct: 99 QNGYVEYPNVNIVSEMVDMISATRAYEANVTAFNASKAMFQKSL-EIG 145 Score = 49.9 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 7/30 (23%), Positives = 16/30 (53%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV 32 +S +I + A R+ ++ N++N +T Sbjct: 5 SSMDISASGLTAERVRMDVISQNIANVNTT 34 >gi|126653433|ref|ZP_01725529.1| flagellar basal-body rod protein [Bacillus sp. B14905] gi|126589789|gb|EAZ83922.1| flagellar basal-body rod protein [Bacillus sp. B14905] Length = 67 Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 9/59 (15%), Positives = 25/59 (42%), Gaps = 3/59 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDIDQKI 56 M F + ++R +++N++N +T GF+ + F +++ + + Sbjct: 1 MFKGFYTVATGMITQQRRTELLSNNLANANTPGFKADQSTIRSFPDMLMSSIGKTNALP 59 >gi|320529387|ref|ZP_08030475.1| flagellar basal-body rod protein FlgC [Selenomonas artemidis F0399] gi|320138353|gb|EFW30247.1| flagellar basal-body rod protein FlgC [Selenomonas artemidis F0399] Length = 151 Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G++E N N + EM MI ++ + + TT I+ + + A+R I S Sbjct: 104 GYVERPNVNIVSEMVDMISASRGYEANTTTINAAKSMVNAALR-IGS 149 Score = 52.6 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 8/48 (16%), Positives = 18/48 (37%), Gaps = 6/48 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFS 42 M + + A R+ +++N++N +T + V F Sbjct: 3 MFLGIDAAASGLTAERLRMDVISNNIANANTTRAQGGGAYHRRYVVFQ 50 >gi|291526818|emb|CBK92404.1| flagellar hook-associated protein FlgK [Eubacterium rectale M104/1] Length = 569 Score = 60.7 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 30/58 (51%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 SF +G + + L+T A+NM+N +T G+ +V+FS+ +N+ + S Sbjct: 7 SFYVGSSGLKNSQNALNTTANNMANVNTTGYVRQQVRFSDKHYITRNNPTAGTNIQQS 64 >gi|332758237|gb|EGJ88560.1| flagellar basal-body rod protein flgF [Shigella flexneri 4343-70] gi|332767685|gb|EGJ97878.1| hypothetical protein SF293071_1339 [Shigella flexneri 2930-71] gi|333008280|gb|EGK27754.1| flagellar basal-body rod protein flgF [Shigella flexneri K-272] gi|333019770|gb|EGK39042.1| flagellar basal-body rod protein flgF [Shigella flexneri K-227] Length = 123 Score = 60.7 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 26/67 (38%), Gaps = 1/67 (1%) Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 S + L+ + V G LE SN N++ M MI ++F +I + + Sbjct: 54 SAETQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNA 113 Query: 235 LEAIRNI 241 A + Sbjct: 114 GRA-NQL 119 >gi|289679023|ref|ZP_06499913.1| flagellar basal body rod protein FlgF [Pseudomonas syringae pv. syringae FF5] Length = 92 Score = 60.7 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 39/93 (41%), Gaps = 2/93 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + ++ A+N++N T GF + + + ++ ++ Sbjct: 1 MDKLLYVAMSGASENAIAQKAHANNLANVSTNGFMRDLEQARSM--PVFGEVMPSRAYAM 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALE 93 S + G+ + TG ELD A++GD W A++ Sbjct: 59 SERPGTDFSAGAMVQTGRELDIAVKGDGWIAVQ 91 >gi|302338075|ref|YP_003803281.1| flagellar basal-body rod protein FlgC [Spirochaeta smaragdinae DSM 11293] gi|301635260|gb|ADK80687.1| flagellar basal-body rod protein FlgC [Spirochaeta smaragdinae DSM 11293] Length = 152 Score = 60.7 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 9/46 (19%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G++E N N + EM M+ ++ + + +++ ++ + A+ I Sbjct: 107 GYVEMPNVNIVEEMVDMMSASRSYEANVAVVNGSKAMFMRAL-EIG 151 Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 6/47 (12%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43 +S N+ A RL V+DN++N T G FR +V F Sbjct: 5 SSINVAATGMSAQRLRLDVVSDNIANASTARTPEGGPFRRSRVIFRA 51 >gi|255021352|ref|ZP_05293400.1| Flagellar basal-body rod protein flgC [Acidithiobacillus caldus ATCC 51756] gi|254969215|gb|EET26729.1| Flagellar basal-body rod protein flgC [Acidithiobacillus caldus ATCC 51756] Length = 138 Score = 60.7 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 7/47 (14%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G+++ N N + EM MI ++ + + +++ + + + + + + Sbjct: 93 GYVQMPNVNPVDEMVNMISASRAYQANVNVMNTTKALLQKTL-TLGA 138 Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 16/101 (15%), Positives = 31/101 (30%), Gaps = 7/101 (6%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDIDQKISF 58 ++ +A A RL+ VA N++N ++ G +R +V F+ + Sbjct: 7 LDVASSALTAQSYRLNVVASNLANANSATSSDGQPYRAREVVFAATPLH-SGQAPAGVEG 65 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 V + EG +P + Sbjct: 66 VQVAGVVEKPGPLKLVYEPGNPAANAEGYVQMPNVNPVDEM 106 >gi|238922533|ref|YP_002936046.1| flagellar hook-associated protein FlgK [Eubacterium rectale ATCC 33656] gi|238874205|gb|ACR73912.1| flagellar hook-associated protein FlgK [Eubacterium rectale ATCC 33656] gi|291526373|emb|CBK91960.1| flagellar hook-associated protein FlgK [Eubacterium rectale DSM 17629] Length = 569 Score = 60.7 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 30/58 (51%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 SF +G + + L+T A+NM+N +T G+ +V+FS+ +N+ + S Sbjct: 7 SFYVGSSGLKNSQNALNTTANNMANVNTTGYVRQQVRFSDKHYITRNNPTAGTNIQQS 64 >gi|313650472|gb|EFS14879.1| flagellar basal-body rod protein flgF [Shigella flexneri 2a str. 2457T] gi|323165585|gb|EFZ51372.1| flagellar basal-body rod protein flgF [Shigella sonnei 53G] gi|332758236|gb|EGJ88559.1| flagellar basal-body rod protein flgF [Shigella flexneri 4343-70] gi|332759657|gb|EGJ89962.1| flagellar basal-body rod protein flgF [Shigella flexneri 2747-71] gi|332761422|gb|EGJ91706.1| flagellar basal-body rod protein flgF [Shigella flexneri K-671] gi|332767684|gb|EGJ97877.1| flagella basal body rod family protein [Shigella flexneri 2930-71] gi|333004886|gb|EGK24406.1| flagellar basal-body rod protein flgF [Shigella flexneri VA-6] gi|333005551|gb|EGK25069.1| flagellar basal-body rod protein flgF [Shigella flexneri K-218] gi|333008279|gb|EGK27753.1| flagellar basal-body rod protein flgF [Shigella flexneri K-272] gi|333019416|gb|EGK38699.1| flagellar basal-body rod protein flgF [Shigella flexneri K-304] gi|333019769|gb|EGK39041.1| flagellar basal-body rod protein flgF [Shigella flexneri K-227] Length = 111 Score = 60.7 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 36/113 (31%), Gaps = 2/113 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N T GFR V ++ + V Sbjct: 1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV--PVEGLSLPTRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113 + G T LD AL+ D W + F++ G+ Sbjct: 59 ASTPGADMTPGKMDYTSRPLDVALQQDGWPCRPLTAAKGIRVMAAFRLIPPGN 111 >gi|332092842|gb|EGI97910.1| flagellar basal-body rod protein flgF [Shigella dysenteriae 155-74] Length = 123 Score = 60.7 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 26/67 (38%), Gaps = 1/67 (1%) Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 S + L+ + V G LE SN N++ M MI ++F +I + + Sbjct: 54 SAETQATRGPVLQADPTLRVMSGGLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNA 113 Query: 235 LEAIRNI 241 A + Sbjct: 114 GRA-NQL 119 >gi|320354315|ref|YP_004195654.1| flagellar basal-body rod protein FlgC [Desulfobulbus propionicus DSM 2032] gi|320122817|gb|ADW18363.1| flagellar basal-body rod protein FlgC [Desulfobulbus propionicus DSM 2032] Length = 145 Score = 60.3 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G++E N N + EM M+ T+ + + TT I ++ + A+ +I S Sbjct: 100 GYVEMPNVNVLKEMVDMMSTTRSYEANTTTIKSAKRMAMRAL-DIGS 145 Score = 44.1 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 8/51 (15%) Query: 1 MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSE 43 M T+F+I + A RL+T++ N++N++T ++ V F Sbjct: 1 MDIFTTFDIAASGLKAQTMRLNTISANLANSETTSTPEGGPYKKKSVVFQT 51 >gi|220932527|ref|YP_002509435.1| flagellar basal-body rod protein FlgC [Halothermothrix orenii H 168] gi|219993837|gb|ACL70440.1| flagellar basal-body rod protein FlgC [Halothermothrix orenii H 168] Length = 145 Score = 60.3 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 22/43 (51%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N EM MI ++ + + T ++ + L+A++ Sbjct: 99 GYVAMPNVNITTEMVDMISASRAYEANVTALNTAKNMALKALQ 141 Score = 56.4 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 6/49 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43 M S NI + A R+ +ADN++N +T G +R F E Sbjct: 1 MLDSLNISASGLTAQRLRMDIIADNIANVNTTRTEDGGPYRRKLPVFRE 49 >gi|207110390|ref|ZP_03244552.1| flagellar hook protein FlgE [Helicobacter pylori HPKX_438_CA4C1] Length = 107 Score = 60.3 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 13/101 (12%), Positives = 33/101 (32%), Gaps = 16/101 (15%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS----------------GVTVKR 196 + +A +G+ + QG + + E+ ++ Sbjct: 7 EPVARIGILAFTNDQGLRKIGGNLYEMQEGTINGENRPLSGNPILGWDEEGKLKFGKIRH 66 Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 +LE SN N+ + +I + + ++ + + EA Sbjct: 67 KYLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEA 107 >gi|297570257|ref|YP_003691601.1| protein of unknown function DUF1078 domain protein [Desulfurivibrio alkaliphilus AHT2] gi|296926172|gb|ADH86982.1| protein of unknown function DUF1078 domain protein [Desulfurivibrio alkaliphilus AHT2] Length = 118 Score = 60.3 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 34/83 (40%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M T + L+ LAL+Q+ + A N +N +T G++ ++V E V + + Sbjct: 1 MVTGIHSALSGLLALQQKTAATAHNTANVNTDGYKKVRVTLHEGVAPGTVEPRAEKIETP 60 Query: 61 SGKEYLSKEVGSFISTGTELDFA 83 G + + +D A Sbjct: 61 GPVVQEQTAAGPEMVEKSNVDLA 83 Score = 56.0 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 5/42 (11%), Positives = 18/42 (42%) Query: 198 FLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +E SN + EM ++ + + + ++ ++ + + Sbjct: 74 MVEKSNVDLAQEMPNLMLSRRYYQANLKVVQSEDERLGSLLN 115 >gi|332088747|gb|EGI93859.1| flagellar basal-body rod protein flgF [Shigella boydii 5216-82] Length = 123 Score = 60.3 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 23/55 (41%), Gaps = 1/55 (1%) Query: 187 EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 + + V G LE SN N++ M MI ++F +I + + A + Sbjct: 66 QADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRA-NQL 119 >gi|302389656|ref|YP_003825477.1| flagellar basal-body rod protein FlgC [Thermosediminibacter oceani DSM 16646] gi|302200284|gb|ADL07854.1| flagellar basal-body rod protein FlgC [Thermosediminibacter oceani DSM 16646] Length = 147 Score = 60.3 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 + G++ N N + EM MI T+ + + T I+ + + +A+ I Sbjct: 99 QMGYVRMPNVNIVTEMVDMISATRSYEANITAINSAKGMITKAL-EIG 145 Score = 59.9 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 6/47 (12%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43 S I + A R+ +++N++N +T G +R +V F E Sbjct: 5 RSLEISASGLTAQRLRMDVISNNIANVNTTRTEEGGPYRRQRVIFQE 51 >gi|317052365|ref|YP_004113481.1| flagellar basal-body rod protein FlgC [Desulfurispirillum indicum S5] gi|316947449|gb|ADU66925.1| flagellar basal-body rod protein FlgC [Desulfurispirillum indicum S5] Length = 151 Score = 60.3 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 23/42 (54%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N N + EM MI ++ + + T+I+ +K EA+ Sbjct: 105 GYVAYPNINVVEEMTDMITASRSYEANITMIETIKKMANEAL 146 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 10/45 (22%), Positives = 20/45 (44%), Gaps = 6/45 (13%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFS 42 I +A A QR++ ++ N++N T G ++ + F Sbjct: 6 GLKISSSALFAQRQRMNVISSNLANAHTTRAEDGTYYKRKDLVFK 50 >gi|238927420|ref|ZP_04659180.1| flagellar basal body rod protein [Selenomonas flueggei ATCC 43531] gi|238884702|gb|EEQ48340.1| flagellar basal body rod protein [Selenomonas flueggei ATCC 43531] Length = 151 Score = 59.9 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 21/139 (15%), Positives = 44/139 (31%), Gaps = 7/139 (5%) Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 R ++ + ++ + + + G S + + Sbjct: 18 RLRMDVISNNIANANTTRTQGGGAYHRRYVVFQPREKGTGIGFESFLARASNRLRPGDGV 77 Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224 + G P P + G++E N N + EM MI ++ + + T Sbjct: 78 RAVSIQADNTQGPLVYEPGHPDANAD------GYVERPNVNIVAEMVDMISASRGYEANT 131 Query: 225 TLIDENEKSMLEAIRNIAS 243 T I+ + + A+R I S Sbjct: 132 TTINAAKSMVSAALR-IGS 149 Score = 51.8 bits (122), Expect = 8e-05, Method: Composition-based stats. Identities = 8/48 (16%), Positives = 18/48 (37%), Gaps = 6/48 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFS 42 M + + A R+ +++N++N +T + V F Sbjct: 3 MFLGIDAAASGLTAERLRMDVISNNIANANTTRTQGGGAYHRRYVVFQ 50 >gi|161526188|ref|YP_001581200.1| flagellar basal body rod protein FlgC [Burkholderia multivorans ATCC 17616] gi|189349096|ref|YP_001944724.1| flagellar basal body rod protein FlgC [Burkholderia multivorans ATCC 17616] gi|221199737|ref|ZP_03572780.1| flagellar basal-body rod protein FlgC [Burkholderia multivorans CGD2M] gi|221208658|ref|ZP_03581658.1| flagellar basal-body rod protein FlgC [Burkholderia multivorans CGD2] gi|221215569|ref|ZP_03588532.1| flagellar basal-body rod protein FlgC [Burkholderia multivorans CGD1] gi|160343617|gb|ABX16703.1| flagellar basal-body rod protein FlgC [Burkholderia multivorans ATCC 17616] gi|189333118|dbj|BAG42188.1| flagellar basal-body rod protein [Burkholderia multivorans ATCC 17616] gi|221164557|gb|EED97040.1| flagellar basal-body rod protein FlgC [Burkholderia multivorans CGD1] gi|221171469|gb|EEE03916.1| flagellar basal-body rod protein FlgC [Burkholderia multivorans CGD2] gi|221179976|gb|EEE12380.1| flagellar basal-body rod protein FlgC [Burkholderia multivorans CGD2M] Length = 141 Score = 59.9 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G+++ N + + EM MI ++ + + ++ ++ ML+ + I S Sbjct: 96 GYVQMPNVDPVQEMVNMISASRSYQANVETLNTAKQLMLKTL-TIGS 141 Score = 41.4 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 34/105 (32%), Gaps = 7/105 (6%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDT-VG-----FRTIKVKFS-EVVGAIKNDIDQ 54 F + +A A QRL+ A N++N D+ G ++ +V F+ + +G + Q Sbjct: 5 MNIFGVAGSALSAQSQRLNVTASNLANADSATGPDGKPYKAKQVVFATDPIGGARTASGQ 64 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 + V K G P + Sbjct: 65 GVGGVRVTKVIDDPSPMKSTYDPANPAADANGYVQMPNVDPVQEM 109 >gi|325529011|gb|EGD06024.1| flagellar basal body rod protein FlgC [Burkholderia sp. TJI49] Length = 141 Score = 59.9 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G+++ N + + EM MI ++ + + ++ ++ ML+ + I S Sbjct: 96 GYVQMPNVDPVQEMVNMISASRSYQANVETLNTAKQLMLKTL-TIGS 141 Score = 41.8 bits (96), Expect = 0.086, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 34/105 (32%), Gaps = 7/105 (6%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDT-VG-----FRTIKVKFS-EVVGAIKNDIDQ 54 F + +A A QRL+ A N++N D+ G ++ +V F+ + +G + Q Sbjct: 5 MNIFGVAGSALSAQSQRLNVTASNLANADSATGPDGKPYKAKQVVFATDPIGGARTASGQ 64 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 + V K G P + Sbjct: 65 GVGGVRVTKVVDDPSPMKSTYDPANPAADANGYVQMPNVDPVQEM 109 >gi|78044505|ref|YP_359818.1| flagellar hook-associated protein FlgK [Carboxydothermus hydrogenoformans Z-2901] gi|77996620|gb|ABB15519.1| flagellar hook-associated protein 1 [Carboxydothermus hydrogenoformans Z-2901] Length = 473 Score = 59.9 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 21/43 (48%), Gaps = 1/43 (2%) Query: 1 MQT-SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS 42 M S L++ A + L + N++N +T G+ +V F+ Sbjct: 1 MFNISLETALSSLRAQQLALDITSHNIANANTPGYTRQRVNFA 43 Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 16/43 (37%) Query: 200 EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 E + EM MI +++ ++ ++ M I + Sbjct: 427 ESGGVSIDEEMANMILYQNAYSAAARIVTAIDEMMDIVINRMG 469 >gi|292669734|ref|ZP_06603160.1| flagellar basal-body rod protein FlgC [Selenomonas noxia ATCC 43541] gi|292648531|gb|EFF66503.1| flagellar basal-body rod protein FlgC [Selenomonas noxia ATCC 43541] Length = 151 Score = 59.9 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 23/43 (53%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++E N N + EM MI ++ + + T I+ + + A+R Sbjct: 104 GYVERPNVNIVAEMVDMISASRGYEANATTINAAKSMVTAALR 146 Score = 52.6 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 8/48 (16%), Positives = 18/48 (37%), Gaps = 6/48 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFS 42 M + + A R+ +++N++N +T + V F Sbjct: 3 MFLGIDAAASGLTAERLRMDVISNNIANANTTRAQGGGAYHRRYVVFQ 50 >gi|89895737|ref|YP_519224.1| hypothetical protein DSY2991 [Desulfitobacterium hafniense Y51] gi|89335185|dbj|BAE84780.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 176 Score = 59.9 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 11/59 (18%), Positives = 26/59 (44%) Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 N + + G++ N N + EM MI ++ + + T ++ ++ M +A+ Sbjct: 113 NPDSPDAAQTTEDGIPAGYVRMPNVNIVTEMVDMISASRAYEANVTALNASKAMMTKAL 171 Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats. Identities = 8/29 (27%), Positives = 16/29 (55%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTV 32 S +I + A RL +++N++N +T Sbjct: 6 SMDISASGLTAQRLRLDVISNNIANINTT 34 >gi|20807891|ref|NP_623062.1| flagellar basal body rod protein [Thermoanaerobacter tengcongensis MB4] gi|20516456|gb|AAM24666.1| Flagellar basal body rod protein [Thermoanaerobacter tengcongensis MB4] Length = 146 Score = 59.9 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 10/48 (20%), Positives = 23/48 (47%), Gaps = 1/48 (2%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 ++G++ N N + EM MI T+ + + T + + +++ I Sbjct: 99 QQGYVSYPNVNIVAEMVDMISATRAYEANVTAFNAAKSMFQKSL-EIG 145 Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 6/48 (12%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44 +S +I A R+ V+ N++N +T G +R V F E+ Sbjct: 5 SSMDISATGLTAERVRMDVVSQNIANANTTRTVQGGPYRRKLVVFKEI 52 >gi|300114793|ref|YP_003761368.1| flagellar hook-associated protein FlgK [Nitrosococcus watsonii C-113] gi|299540730|gb|ADJ29047.1| flagellar hook-associated protein FlgK [Nitrosococcus watsonii C-113] Length = 647 Score = 59.9 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 12/79 (15%), Positives = 29/79 (36%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 IG + LA ++ L+T + N++N +T GF + + + + + Sbjct: 7 LGIGASGLLAAQRALATTSHNIANVNTPGFSRQRAELAARLPEFTGQGFIGTGVDVTTVR 66 Query: 65 YLSKEVGSFISTGTELDFA 83 + + ++A Sbjct: 67 RAYDSFLTEQARHATSEYA 85 Score = 44.5 bits (103), Expect = 0.013, Method: Composition-based stats. Identities = 7/41 (17%), Positives = 13/41 (31%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E +I Q F + +I + + + Sbjct: 606 SGVNLEEEAANLIRFQQAFQAAARVISTADTMFQTLLGAVG 646 >gi|219670161|ref|YP_002460596.1| flagellar basal-body rod protein FlgC [Desulfitobacterium hafniense DCB-2] gi|219540421|gb|ACL22160.1| flagellar basal-body rod protein FlgC [Desulfitobacterium hafniense DCB-2] Length = 176 Score = 59.5 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 11/59 (18%), Positives = 26/59 (44%) Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 N + + G++ N N + EM MI ++ + + T ++ ++ M +A+ Sbjct: 113 NPDSPDAAQTTEDGIPAGYVRMPNVNIVTEMVDMISASRAYEANVTALNASKAMMSKAL 171 Score = 49.1 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 8/29 (27%), Positives = 16/29 (55%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTV 32 S +I + A RL +++N++N +T Sbjct: 6 SMDISASGLTAQRLRLDVISNNIANINTT 34 >gi|73532548|dbj|BAE19832.1| flagellar hook protein [Edwardsiella tarda] Length = 76 Score = 59.5 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 36/81 (44%), Gaps = 5/81 (6%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 A +L + +N++N+ TVGF++ V F+++ + V + G Sbjct: 1 MNAASSQLDVIGNNIANSQTVGFKSGSVTFADMFA-----GSKVGLGVTVASVNQDFKDG 55 Query: 72 SFISTGTELDFALEGDAWFAL 92 + +T LD A+ G +F + Sbjct: 56 TTTTTNRGLDVAISGQGFFRM 76 >gi|89069822|ref|ZP_01157157.1| flagellar basal-body rod protein FlgC [Oceanicola granulosus HTCC2516] gi|89044623|gb|EAR50739.1| flagellar basal-body rod protein FlgC [Oceanicola granulosus HTCC2516] Length = 128 Score = 59.5 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 14/74 (18%), Positives = 31/74 (41%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 + ++ + A RL V++N++N+DT G+R V F + GA ++ + Sbjct: 6 QALDVVASGLRAQSARLRHVSENIANSDTPGYRRKTVTFRDAFGATAGEVAVGPVRLDDS 65 Query: 63 KEYLSKEVGSFIST 76 + ++ Sbjct: 66 ALERIFDPAHPLAD 79 Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 5/47 (10%), Positives = 17/47 (36%) Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G E SN + + E+ + + + + ++ + + + Sbjct: 81 SGHFEGSNVDLLIEIADAREAQRSYEANLKMFEQVRQMSTSLLDLLR 127 >gi|154174960|ref|YP_001407311.1| hypothetical protein CCV52592_2049 [Campylobacter curvus 525.92] gi|153793155|gb|EAU00899.2| conserved hypothetical protein [Campylobacter curvus 525.92] Length = 533 Score = 59.5 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 18/122 (14%), Positives = 43/122 (35%), Gaps = 8/122 (6%) Query: 125 DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG--------FVRRENSG 176 D + + + + + +A + LY QG + NSG Sbjct: 407 DGYAEGLLSKYSMDDSGNVIANFDNTRTFPVAKVALYHFQNEQGVSKVGDNLYEATPNSG 466 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + + + G + LE SN + + ++I + + +++ I +++ + Sbjct: 467 EAFFYKNKAGQTIYGANIIANKLEMSNVDLGQALTEVIVIQKAYDASAKSITTSDEMIQT 526 Query: 237 AI 238 AI Sbjct: 527 AI 528 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 22/116 (18%), Positives = 40/116 (34%), Gaps = 7/116 (6%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK------NDIDQK 55 F G++ + ++N++N + GF+ +F ++ DQ Sbjct: 1 MRGFYNGVSGIKTQSFGMDVWSNNIANINNAGFKASIPEFKNLINQSAVSAGNYPTTDQV 60 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF-ALESPRGIILTRDGRFKVTD 110 L G F +T D A+ G +F ++ I TR G F + Sbjct: 61 GLGAVKQTTALKMSNGGFQTTDKNFDLAIGGKGFFGVTDANGKIYYTRTGSFNIDA 116 >gi|254251189|ref|ZP_04944507.1| flagella basal body rod protein [Burkholderia dolosa AUO158] gi|124893798|gb|EAY67678.1| flagella basal body rod protein [Burkholderia dolosa AUO158] Length = 141 Score = 59.5 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G+++ N + + EM MI ++ + + ++ ++ ML+ + I S Sbjct: 96 GYVQMPNVDPVQEMVNMISASRSYQANVETLNTAKQLMLKTL-TIGS 141 Score = 41.4 bits (95), Expect = 0.10, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 40/100 (40%), Gaps = 9/100 (9%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDT-VG-----FRTIKVKFS-EVVGAIKNDIDQ 54 F + +A A QRL+ A N++N D+ G ++ +V F+ + +G + Q Sbjct: 5 MNIFGVAGSALSAQSQRLNVTASNLANADSATGPDGKPYKAKQVVFATDPMGGARTASGQ 64 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES 94 + V K ST + A + + + + + Sbjct: 65 GVGGVRVTKVIDD--PSPMKSTYDPANPAADENGYVQMPN 102 >gi|90577350|ref|ZP_01233161.1| putative flagellar hook-associated protein [Vibrio angustum S14] gi|90440436|gb|EAS65616.1| putative flagellar hook-associated protein [Vibrio angustum S14] Length = 455 Score = 59.5 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 23/67 (34%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 NIGL A + L A N++N +T GF + + + G + + Sbjct: 1 MNMINIGLTGLNANKTALDVTAHNIANVNTPGFSRQQAMMNALAGNDILSAGSGVEIASI 60 Query: 62 GKEYLSK 68 + Sbjct: 61 RRISDQF 67 Score = 36.8 bits (83), Expect = 2.6, Method: Composition-based stats. Identities = 7/40 (17%), Positives = 15/40 (37%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 S NS E ++ T + + +I + +R + Sbjct: 416 SAVNSDEEAANLMTFTNAYQANMKVISTANELFDSVLRLL 455 >gi|46204473|ref|ZP_00049952.2| COG1749: Flagellar hook protein FlgE [Magnetospirillum magnetotacticum MS-1] Length = 127 Score = 59.5 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 14/89 (15%), Positives = 31/89 (34%), Gaps = 1/89 (1%) Query: 155 IATMGLYSVDMSQGFVRRE-NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQM 213 +A + + G + + L TV +E SN + E +M Sbjct: 39 LARVEVAQFVNPDGLKADSLGNYQQTVASGEAISGLKDTTVVGANVEQSNTDIAAEFSKM 98 Query: 214 IHLTQKFNSITTLIDENEKSMLEAIRNIA 242 I Q +++ T ++ + + + + I Sbjct: 99 IVTQQAYSANTRVMSTAQTMISDLLNVIR 127 >gi|114320055|ref|YP_741738.1| flagellar basal-body rod protein FlgC [Alkalilimnicola ehrlichii MLHE-1] gi|114226449|gb|ABI56248.1| flagellar basal-body rod protein FlgC [Alkalilimnicola ehrlichii MLHE-1] Length = 151 Score = 59.5 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 27/44 (61%) Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +G++ SN N + EM MI ++ + + +++ +++ +L+ +R Sbjct: 104 QGYVYRSNVNPVEEMTNMISASRSYQNNVEVMNTSKELLLQTLR 147 Score = 42.5 bits (98), Expect = 0.047, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 6/49 (12%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVV 45 F++ + A + RL+TVA N++N++TV +R+ + F+ V+ Sbjct: 5 KVFDVSGSGMNAQQTRLNTVASNLANSETVAGSPEQAYRSRQPVFASVL 53 >gi|119899029|ref|YP_934242.1| flagellar basal-body rod protein FlgC [Azoarcus sp. BH72] gi|119671442|emb|CAL95355.1| flagellar basal-body rod protein FlgC [Azoarcus sp. BH72] Length = 146 Score = 59.1 bits (141), Expect = 5e-07, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 22/43 (51%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++E N N + EM MI ++ + + +++ + + ++ Sbjct: 101 GYVEMPNVNVVEEMVNMISASRSYQNNAEVMNTAQTLLQRTLQ 143 Score = 38.7 bits (88), Expect = 0.76, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 6/49 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43 M F I +A A RL+T A N++N D+V G +R +V F+ Sbjct: 3 MLNVFQIAGSALNAQSLRLNTTASNLANADSVIAEDGQPYRAKQVVFAA 51 >gi|91202525|emb|CAJ72164.1| strongly similar to flagellar basal-body rod protein FlgC [Candidatus Kuenenia stuttgartiensis] Length = 147 Score = 59.1 bits (141), Expect = 5e-07, Method: Composition-based stats. Identities = 10/46 (21%), Positives = 23/46 (50%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 GF+E N N EM ++ ++ + + +I+ ++ +A+ I Sbjct: 101 GFVEMPNVNIATEMVDLVTASRSYEANLAVINSSKDITNQALSIIG 146 >gi|225377360|ref|ZP_03754581.1| hypothetical protein ROSEINA2194_03008 [Roseburia inulinivorans DSM 16841] gi|225210785|gb|EEG93139.1| hypothetical protein ROSEINA2194_03008 [Roseburia inulinivorans DSM 16841] Length = 51 Score = 59.1 bits (141), Expect = 5e-07, Method: Composition-based stats. Identities = 8/36 (22%), Positives = 17/36 (47%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRT 36 M + ++RL + +N++N DT G++ Sbjct: 1 MIKGLYTAYTGMVNEQKRLDVLTNNLANADTNGYKK 36 >gi|332799171|ref|YP_004460670.1| flagellar basal-body rod protein FlgC [Tepidanaerobacter sp. Re1] gi|332696906|gb|AEE91363.1| flagellar basal-body rod protein FlgC [Tepidanaerobacter sp. Re1] Length = 143 Score = 59.1 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 22/43 (51%) Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N N + EM MI T+ + + T I+ + M +A+ Sbjct: 96 SGYVMLPNVNIVTEMVDMISATRSYEANVTAINSAKSMMSKAL 138 Score = 55.3 bits (131), Expect = 8e-06, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 6/47 (12%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43 S +I + A RL T+++N++N +T G F+ +V F E Sbjct: 5 NSLDISASGLTAQRLRLDTISNNIANANTTRTEEGGPFQRERVVFQE 51 >gi|296274397|ref|YP_003657028.1| hypothetical protein Arnit_2873 [Arcobacter nitrofigilis DSM 7299] gi|296098571|gb|ADG94521.1| protein of unknown function DUF1078 domain protein [Arcobacter nitrofigilis DSM 7299] Length = 913 Score = 58.7 bits (140), Expect = 6e-07, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 34/82 (41%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M S NI + A + + +N++N +T G++ V+ SE + + + ++ Sbjct: 1 MLDSLNIAQSGLKAAQTAVENTMNNIANVNTEGYKKRVVETSETDQLPGSKLGRGVTVGN 60 Query: 61 SGKEYLSKEVGSFISTGTELDF 82 + + + I T+ + Sbjct: 61 TIRITSEYLYDNIIKQNTKESY 82 Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 4/35 (11%), Positives = 15/35 (42%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 ++ EM +I +++ +I ++ + + Sbjct: 875 VDNDEEMINLIKFQSAYSANAKMITTVDEMLKTLL 909 >gi|260893877|ref|YP_003239974.1| flagellar basal-body rod protein FlgC [Ammonifex degensii KC4] gi|260866018|gb|ACX53124.1| flagellar basal-body rod protein FlgC [Ammonifex degensii KC4] Length = 137 Score = 58.7 bits (140), Expect = 7e-07, Method: Composition-based stats. Identities = 9/48 (18%), Positives = 23/48 (47%), Gaps = 1/48 (2%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 + G++ N N E+ +I + + + T+++ ++ +AI I Sbjct: 89 QNGYVRYPNVNVADEVVDLIGAARAYEANATVLETAKEMARQAI-EIG 135 Score = 45.6 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 6/77 (7%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDIDQKISFVA 60 I + A RL VA+N++N DT G +R F++V+ A K + V Sbjct: 9 ISGSGLTAERLRLDLVANNLANIDTTRTPAGGPYRRRVPVFAQVLEARKEGMVGMGVRVV 68 Query: 61 SGKEYLSKEVGSFISTG 77 + E S + Sbjct: 69 AIVEDQSPFKVVYDPNH 85 >gi|183220163|ref|YP_001838159.1| flagellar basal body rod protein FlgC [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189910283|ref|YP_001961838.1| flagellar basal body rod protein FlgC [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167774959|gb|ABZ93260.1| Endoflagellar proximal basal body rod protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167778585|gb|ABZ96883.1| Flagellar basal-body rod protein FlgC [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 153 Score = 58.7 bits (140), Expect = 7e-07, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 23/41 (56%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 G++E N N + EM MI ++ + + LI+ ++ M +A Sbjct: 107 GYVELPNINIVTEMTDMISASRSYEANVQLINGSKAMMNKA 147 Score = 56.4 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 27/67 (40%), Gaps = 7/67 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNT----DTVG---FRTIKVKFSEVVGAIKNDID 53 M S NI A R+ +++N++N+ +T G FR +V + + + Sbjct: 3 MFDSINISATGLSAQRLRMDVISNNIANSTTTRNTNGDGPFRRDRVILTPINLRTQWKSP 62 Query: 54 QKISFVA 60 VA Sbjct: 63 VYPFGVA 69 >gi|218509843|ref|ZP_03507721.1| flagellar hook protein FlgE [Rhizobium etli Brasil 5] Length = 65 Score = 58.7 bits (140), Expect = 7e-07, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 S ++ A RLSTV+DN++N +T G++ + FS +V S + Sbjct: 6 SMKTAVSGMNAQANRLSTVSDNIANVNTTGYKAVSTSFSSLVLPSSGGNYNSGGVQTSVR 65 >gi|167585192|ref|ZP_02377580.1| flagellar basal-body rod protein FlgC [Burkholderia ubonensis Bu] Length = 141 Score = 58.7 bits (140), Expect = 7e-07, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 23/43 (53%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G+++ N + + EM MI ++ + + ++ ++ ML+ + Sbjct: 96 GYVQMPNVDPVQEMVNMISASRSYQANVETLNTAKQLMLKTLT 138 Score = 41.0 bits (94), Expect = 0.15, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 36/99 (36%), Gaps = 7/99 (7%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDT-VG-----FRTIKVKFSEVVGAIKNDIDQK 55 F + +A A QRL+ A N++N D+ G ++ +V F+ + Sbjct: 5 MNIFGVAGSALSAQSQRLNVTASNIANADSATGPDGKPYKAKQVVFAADPQGRARTASGQ 64 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES 94 + + + ST + A + + + + + Sbjct: 65 GVGGVRVAKVID-DPSPMKSTYDPANPAADANGYVQMPN 102 >gi|83589621|ref|YP_429630.1| flagellar basal-body rod protein FlgC [Moorella thermoacetica ATCC 39073] gi|83572535|gb|ABC19087.1| flagellar basal-body rod protein FlgC [Moorella thermoacetica ATCC 39073] Length = 145 Score = 58.7 bits (140), Expect = 7e-07, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G++ N N + EM MI ++ + + T+++ + L+A+ I Sbjct: 100 GYVHLPNINIVNEMVDMITASRAYEANVTVLNAAKAMTLKAL-EIG 144 Score = 55.3 bits (131), Expect = 8e-06, Method: Composition-based stats. Identities = 14/101 (13%), Positives = 32/101 (31%), Gaps = 10/101 (9%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKF----SEVVGAIKNDID 53 + I + A RL +A+N++N +T G +R F E +G + Sbjct: 6 ALAISASGLTAERLRLDIIANNLANINTTRTPRGGPYRREVPVFAERLQEAMGQLPGRPS 65 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES 94 + + ++ + + + L + Sbjct: 66 SRAPGAGVEVAAIVEDNSPPRLVYDPSHPDADANGYVHLPN 106 >gi|77165832|ref|YP_344357.1| hypothetical protein Noc_2369 [Nitrosococcus oceani ATCC 19707] gi|254433787|ref|ZP_05047295.1| flagellar hook-associated protein FlgK [Nitrosococcus oceani AFC27] gi|76884146|gb|ABA58827.1| conserved hypothetical protein [Nitrosococcus oceani ATCC 19707] gi|207090120|gb|EDZ67391.1| flagellar hook-associated protein FlgK [Nitrosococcus oceani AFC27] Length = 647 Score = 58.7 bits (140), Expect = 7e-07, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 33/85 (38%), Gaps = 2/85 (2%) Query: 1 MQTS--FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 M +S IG + LA ++ L+T + N++N +T GF + + + + Sbjct: 1 MASSDLLGIGASGLLAAQRALATTSHNIANVNTPGFSRQRTELAARLPEFTGQGFIGTGV 60 Query: 59 VASGKEYLSKEVGSFISTGTELDFA 83 + + + + ++A Sbjct: 61 DVTTVRRAYDSFLTEQARYSTSEYA 85 Score = 44.5 bits (103), Expect = 0.013, Method: Composition-based stats. Identities = 7/41 (17%), Positives = 13/41 (31%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E +I Q F + +I + + + Sbjct: 606 SGVNLEEEAANLIRFQQAFQAAARVISTADTMFQTLLGAVG 646 >gi|254516995|ref|ZP_05129053.1| flagellar hook-associated protein FlgK [gamma proteobacterium NOR5-3] gi|219674500|gb|EED30868.1| flagellar hook-associated protein FlgK [gamma proteobacterium NOR5-3] Length = 639 Score = 58.3 bits (139), Expect = 8e-07, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 29/52 (55%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M NIG +A L+L++ +ST N++N +T GF +V+F+ + + Sbjct: 1 MADVLNIGTSALLSLQRAISTTGHNIANVNTEGFSRQRVEFAALEPQLSGAG 52 >gi|237653585|ref|YP_002889899.1| flagellar basal-body rod protein FlgC [Thauera sp. MZ1T] gi|237624832|gb|ACR01522.1| flagellar basal-body rod protein FlgC [Thauera sp. MZ1T] Length = 134 Score = 58.3 bits (139), Expect = 8e-07, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 20/43 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++E N N + EM MI ++ + + ++ + ++ Sbjct: 89 GYVEMPNVNVVEEMVNMISASRSYQNNAEVMSTARTLLQRTLQ 131 Score = 37.5 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 6/49 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43 M F I +A A RL+ A N++N D+V G +R +V F+ Sbjct: 3 MLNVFQIAGSALNAQSLRLNATASNLANADSVISEDGQPYRAKQVVFAA 51 >gi|206895941|ref|YP_002246669.1| flagellar hook-associated protein FlgK [Coprothermobacter proteolyticus DSM 5265] gi|206738558|gb|ACI17636.1| flagellar hook-associated protein FlgK [Coprothermobacter proteolyticus DSM 5265] Length = 540 Score = 58.3 bits (139), Expect = 8e-07, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 17/42 (40%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS 42 M S I + A L + N++N +T G+ + F Sbjct: 1 MIWSLEIAKRSLQAQMLALDVTSHNIANVNTPGYSRQEAVFR 42 Score = 38.3 bits (87), Expect = 0.89, Method: Composition-based stats. Identities = 6/42 (14%), Positives = 15/42 (35%), Gaps = 1/42 (2%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 S N E +I + + ++ + + I N+ + Sbjct: 499 SGVNLDEEAVNLIRFQKGYAMSARIVSVVDGMLD-LIINMGA 539 >gi|226313072|ref|YP_002772966.1| flagellar basal-body rod protein FlgC [Brevibacillus brevis NBRC 100599] gi|226096020|dbj|BAH44462.1| flagellar basal-body rod protein FlgC [Brevibacillus brevis NBRC 100599] Length = 152 Score = 58.3 bits (139), Expect = 9e-07, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 25/44 (56%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 + G+L N + M EM MI ++ + + T ++ ++ ML+A+ Sbjct: 106 QDGYLLMPNVDPMKEMVDMISASRSYEANVTALNASKAMMLKAL 149 Score = 40.2 bits (92), Expect = 0.27, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 17/41 (41%), Gaps = 5/41 (12%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 N +A A RL T++ N++N + + F + Sbjct: 5 QGINTSASALTANRLRLDTISSNIANAEVT-----RANFVD 40 >gi|295696111|ref|YP_003589349.1| flagellar basal-body rod protein FlgC [Bacillus tusciae DSM 2912] gi|295411713|gb|ADG06205.1| flagellar basal-body rod protein FlgC [Bacillus tusciae DSM 2912] Length = 155 Score = 58.3 bits (139), Expect = 9e-07, Method: Composition-based stats. Identities = 14/122 (11%), Positives = 37/122 (30%) Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 A+ + + + G + G+ V + Sbjct: 29 ANADTTRRPDGTPGPYRRRMVVMEPQPAPGSFAAALASAGGTGVPEGVRVSAIVEDPSPF 88 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 P P + + G+++ N + EM +I ++ + + T +D + ++ Sbjct: 89 QLKYDPSNPDAVQNPASPLYGYVQLPNVDVATEMVDLISASRAYEANVTALDAGKMMAVK 148 Query: 237 AI 238 A+ Sbjct: 149 AL 150 Score = 43.7 bits (101), Expect = 0.020, Method: Composition-based stats. Identities = 10/31 (32%), Positives = 16/31 (51%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32 Q +F I + A R+ +A N++N DT Sbjct: 4 QDTFAISGSGLSAQRLRMDVIAGNIANADTT 34 >gi|255019026|ref|ZP_05291152.1| flagellar basal body rod protein FlgG [Listeria monocytogenes FSL F2-515] Length = 168 Score = 58.3 bits (139), Expect = 9e-07, Method: Composition-based stats. Identities = 24/141 (17%), Positives = 47/141 (33%), Gaps = 2/141 (1%) Query: 85 EGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE 144 +G +F I L+R G+F G L +A G + + Sbjct: 11 QGSNFFITAKNGEISLSRGGQFHSDQFGFLRTADGANLLSATGEAIQVGQKTSIRAEANG 70 Query: 145 KGEISQKGKVIATMGLYSVDMSQG--FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDS 202 ++ + + +G V +Q V+ + N T ++ G +E S Sbjct: 71 DLYNAETSQYLGRLGTKFVSANQADSLVKDGEGRLHINGVNTMNLPAGQGIIQNGVIETS 130 Query: 203 NANSMYEMGQMIHLTQKFNSI 223 N + EM Q++ + + Sbjct: 131 NVDLGVEMVQLMDNQRMVQAS 151 >gi|152990371|ref|YP_001356093.1| flagellar basal-body rod protein FlgC [Nitratiruptor sp. SB155-2] gi|151422232|dbj|BAF69736.1| flagellar basal-body rod protein FlgC [Nitratiruptor sp. SB155-2] Length = 136 Score = 58.3 bits (139), Expect = 9e-07, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 22/42 (52%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G+++ N + + EM MI + + + T + ++ +L+ I Sbjct: 90 GYVQLPNVDPLREMVDMISAMRTYEANLTAFNTHKDMLLKTI 131 Score = 41.4 bits (95), Expect = 0.098, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 23/59 (38%), Gaps = 6/59 (10%) Query: 1 MQ-TSFNIGLAAQLALEQRLSTVADNMSNTDT---VG--FRTIKVKFSEVVGAIKNDID 53 M + + R+ VA NM+N ++ G +R F E++ +N I Sbjct: 1 MIFKGLEVSQTGLSTQKYRMDIVASNMANANSIDDNGVPYRRKIPIFQEILDKEQNRIP 59 >gi|254246963|ref|ZP_04940284.1| Flagellar basal-body rod protein FlgC [Burkholderia cenocepacia PC184] gi|124871739|gb|EAY63455.1| Flagellar basal-body rod protein FlgC [Burkholderia cenocepacia PC184] Length = 141 Score = 58.3 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G+++ N + + EM MI ++ + + ++ + ML+ + I S Sbjct: 96 GYVQMPNVDPVQEMVNMISASRSYQANVETLNTAKTLMLKTL-TIGS 141 Score = 42.2 bits (97), Expect = 0.071, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 34/105 (32%), Gaps = 7/105 (6%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDT-VG-----FRTIKVKFS-EVVGAIKNDIDQ 54 F + +A A QRL+ A N++N D+ G ++ +V F+ + +G + Q Sbjct: 5 MNIFGVAGSALSAQSQRLNVTASNLANADSATGPDGKPYKAKQVVFATDPLGGARTASGQ 64 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 + V K G P + Sbjct: 65 GVGGVRVTKVMDDPSPMKSTYDPANPAADANGYVQMPNVDPVQEM 109 >gi|167630287|ref|YP_001680786.1| flagellar basal-body rod protein flgc, putative [Heliobacterium modesticaldum Ice1] gi|167593027|gb|ABZ84775.1| flagellar basal-body rod protein flgc, putative [Heliobacterium modesticaldum Ice1] Length = 159 Score = 58.3 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 25/61 (40%) Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 I D G++ N N++ EM MI T+ + + T I+ + ++A Sbjct: 94 FKMIYDPQHPDAIRTGPLTGYVRMPNVNTVTEMVDMISATRAYEANVTAINAAKSMAMKA 153 Query: 238 I 238 + Sbjct: 154 L 154 Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 6/31 (19%), Positives = 16/31 (51%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32 +S + + A R+ +++N++N +T Sbjct: 4 LSSIDTSASGLTAQRFRMDIISNNLANVNTT 34 >gi|78067839|ref|YP_370608.1| flagellar basal body rod protein FlgC [Burkholderia sp. 383] gi|77968584|gb|ABB09964.1| Flagellar basal-body rod protein FlgC [Burkholderia sp. 383] Length = 141 Score = 58.3 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G+++ N + + EM MI ++ + + ++ + ML+ + I S Sbjct: 96 GYVQMPNVDPVQEMVNMISASRSYQANVETLNTAKTLMLKTL-TIGS 141 Score = 41.8 bits (96), Expect = 0.096, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 40/100 (40%), Gaps = 9/100 (9%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDT-VG-----FRTIKVKFS-EVVGAIKNDIDQ 54 F + +A A QRL+ A N++N D+ G ++ +V F+ + +G + Q Sbjct: 5 MNIFGVAGSALSAQSQRLNVTASNLANADSATGPDGKPYKAKQVVFATDPIGGARTASGQ 64 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES 94 + V K ST + A + + + + + Sbjct: 65 GVGGVRVTKVMDD--PSPMKSTYDPSNPAADSNGYVQMPN 102 >gi|51246506|ref|YP_066390.1| flagellar basal body rod protein (FlgC) [Desulfotalea psychrophila LSv54] gi|50877543|emb|CAG37383.1| probable flagellar basal body rod protein (FlgC) [Desulfotalea psychrophila LSv54] Length = 143 Score = 58.0 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 25/46 (54%), Gaps = 1/46 (2%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G+++ N +++ EM M+ T+ + + T I ++ L+A+ I Sbjct: 98 GYVDMPNVDTLKEMVDMMSATRSYQANVTAIQSAKRMALKAL-EIG 142 Score = 48.3 bits (113), Expect = 9e-04, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 31/84 (36%), Gaps = 8/84 (9%) Query: 1 MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDI 52 M SF I +A A RL T++ N++N +T ++ V F + Sbjct: 1 MDILNSFKISSSALKAQSIRLDTISSNIANAETTSTPEGGPYKKKSVYFQAKPLTFAEQL 60 Query: 53 DQKISFVASGKEYLSKEVGSFIST 76 + ++ +G E ++ Sbjct: 61 NGSLNAKTTGVEVINIIEDKSEPR 84 >gi|188592115|ref|YP_001796713.1| flgc: flagellar basal-body rod protein [Cupriavidus taiwanensis LMG 19424] gi|170938489|emb|CAP63476.1| FlgC: Flagellar basal-body rod protein [Cupriavidus taiwanensis LMG 19424] Length = 122 Score = 58.0 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 16/96 (16%), Positives = 38/96 (39%) Query: 144 EKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSN 203 G+ + +V+ M G V+ + P+ P + +G++ N Sbjct: 24 PDGQAYRAKQVVFGMAPTPGQTDIGGVQVQGVSEDPSPPRMVHNPTHPMANAQGYVVMPN 83 Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 N + EM MI ++ + + +++ + ML+ + Sbjct: 84 VNPVEEMVNMISASRSYQANVEVLNTAKNMMLKTLT 119 >gi|218674651|ref|ZP_03524320.1| flagellar hook protein FlgE [Rhizobium etli GR56] Length = 77 Score = 58.0 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 34/72 (47%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 S ++ A RLSTV+DN++N +T G++ + FS +V + S + Sbjct: 6 SMKTAVSGMSAQANRLSTVSDNIANANTTGYKAVSTSFSSLVLPSSSGNYNSGGVQTSVR 65 Query: 64 EYLSKEVGSFIS 75 + +S++ + Sbjct: 66 QAISQQGDISYT 77 >gi|134297200|ref|YP_001120935.1| flagellar basal body rod protein FlgC [Burkholderia vietnamiensis G4] gi|134140357|gb|ABO56100.1| flagellar basal-body rod protein FlgC [Burkholderia vietnamiensis G4] Length = 141 Score = 58.0 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 22/43 (51%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G+++ N + + EM MI ++ + + ++ + ML+ + Sbjct: 96 GYVQMPNVDPVQEMVNMISASRSYQANVETLNTAKTLMLKTLT 138 Score = 42.5 bits (98), Expect = 0.050, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 34/105 (32%), Gaps = 7/105 (6%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDT-VG-----FRTIKVKFS-EVVGAIKNDIDQ 54 F + +A A QRL+ A N++N D+ G ++ +V F+ + +G + Q Sbjct: 5 MNIFGVAGSALSAQSQRLNVTASNLANADSATGPDGKPYKAKQVVFATDPLGGARTASGQ 64 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 + V K G P + Sbjct: 65 GVGGVRVTKVVDDPSPMKSTYDPANPAADANGYVQMPNVDPVQEM 109 >gi|149203129|ref|ZP_01880100.1| flagellar basal-body rod protein FlgC [Roseovarius sp. TM1035] gi|149143675|gb|EDM31711.1| flagellar basal-body rod protein FlgC [Roseovarius sp. TM1035] Length = 130 Score = 58.0 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 28/78 (35%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 + ++ + A QRL V++N++N DT G+R V F +S V Sbjct: 6 NALSVSASGLKAQAQRLQHVSENIANADTPGYRRKTVSFEATHAGTGTAGAVTVSRVHLD 65 Query: 63 KEYLSKEVGSFISTGTEL 80 + + E Sbjct: 66 QSAPQRIYDPSHPLADET 83 Score = 36.8 bits (83), Expect = 2.5, Method: Composition-based stats. Identities = 15/106 (14%), Positives = 29/106 (27%), Gaps = 3/106 (2%) Query: 128 SVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE 187 + I N G + AT + R +P P Sbjct: 18 QAQRLQHVSENIANADTPGYRRKTVSFEATHAGTGTAGAVTVSRVHLDQSAPQRIYDPSH 77 Query: 188 DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 L+ T G + S + M E+ + + + + D+ + Sbjct: 78 PLADET---GHYQGSTVDLMIEIADAREAQRSYEANLKMFDQVRQM 120 >gi|116694217|ref|YP_728428.1| flagellar basal body rod protein [Ralstonia eutropha H16] gi|113528716|emb|CAJ95063.1| flagellar basal body rod protein [Ralstonia eutropha H16] Length = 135 Score = 58.0 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 16/96 (16%), Positives = 37/96 (38%) Query: 144 EKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSN 203 G+ + +V+ M G V+ P+ P + +G++ N Sbjct: 37 PDGQAYRAKQVVFGMAPTPGQTDIGGVQVRGVSEDPSPPRMVHNPTHPMANAQGYVVMPN 96 Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 N + EM MI ++ + + +++ + ML+ + Sbjct: 97 VNPVEEMVNMISASRSYQANVEVLNTAKNMMLKTLT 132 Score = 38.3 bits (87), Expect = 0.86, Method: Composition-based stats. Identities = 19/109 (17%), Positives = 37/109 (33%), Gaps = 7/109 (6%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQ- 54 F++ +A A QR++ A N++N D+V +R +V F + DI Sbjct: 4 MNIFDVAGSAMAAQSQRMNVTASNLANADSVVSPDGQAYRAKQVVFGMAPTPGQTDIGGV 63 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103 ++ V+ + + + E I +R Sbjct: 64 QVRGVSEDPSPPRMVHNPTHPMANAQGYVVMPNVNPVEEMVNMISASRS 112 >gi|254994393|ref|ZP_05276583.1| flagellar hook protein FlgE [Listeria monocytogenes FSL J2-064] Length = 62 Score = 58.0 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 10/54 (18%), Positives = 18/54 (33%) Query: 188 DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 + LE SN + E ++ F T +I + M + + I Sbjct: 8 QNGAGGISGSSLEGSNVDLSREFVNLMTYQSGFQGNTKVIRVADDVMKQIVNLI 61 >gi|85706171|ref|ZP_01037266.1| flagellar basal-body rod protein FlgC [Roseovarius sp. 217] gi|85669335|gb|EAQ24201.1| flagellar basal-body rod protein FlgC [Roseovarius sp. 217] Length = 130 Score = 57.6 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 31/78 (39%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 + ++ + A QRL V++N++N DT G+R V F + ++S V Sbjct: 6 NALSVSASGLKAQAQRLVHVSENIANADTPGYRRKTVSFETAFAGSEGTGAVEVSRVNLD 65 Query: 63 KEYLSKEVGSFISTGTEL 80 + L K E Sbjct: 66 RRELQKIYDPSHPLADET 83 Score = 36.8 bits (83), Expect = 2.7, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 14/37 (37%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 G + S + M E+ + + + + D+ + Sbjct: 84 GHYQGSTVDLMIEIADAREAQRSYEANLKMFDQVRQM 120 >gi|125972984|ref|YP_001036894.1| flagellar basal-body rod protein FlgC [Clostridium thermocellum ATCC 27405] gi|256004781|ref|ZP_05429756.1| flagellar basal-body rod protein FlgC [Clostridium thermocellum DSM 2360] gi|281417195|ref|ZP_06248215.1| flagellar basal-body rod protein FlgC [Clostridium thermocellum JW20] gi|125713209|gb|ABN51701.1| flagellar basal-body rod protein FlgC [Clostridium thermocellum ATCC 27405] gi|255991231|gb|EEU01338.1| flagellar basal-body rod protein FlgC [Clostridium thermocellum DSM 2360] gi|281408597|gb|EFB38855.1| flagellar basal-body rod protein FlgC [Clostridium thermocellum JW20] gi|316940780|gb|ADU74814.1| flagellar basal-body rod protein FlgC [Clostridium thermocellum DSM 1313] Length = 147 Score = 57.6 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 23/46 (50%), Gaps = 1/46 (2%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G++ N + + EM MI T+ + + T I+ + ++A+ I Sbjct: 102 GYVLMPNVDVITEMVNMISATRAYEANITAINTTKGLAMKAL-EIG 146 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 6/46 (13%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43 S +I +A A R+ T++ N++N +T G +R V F E Sbjct: 6 SLDISASALTAQRLRMDTISQNIANANTTRTENGQPYRRKTVLFEE 51 >gi|326791545|ref|YP_004309366.1| flagellar basal-body rod protein FlgC [Clostridium lentocellum DSM 5427] gi|326542309|gb|ADZ84168.1| flagellar basal-body rod protein FlgC [Clostridium lentocellum DSM 5427] Length = 145 Score = 57.6 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 23/44 (52%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 +G++E N N++ EM MI ++ + + T + + +A+ Sbjct: 98 AQGYVEMPNVNTVDEMVNMISASRSYEANVTSFNTMKSMFAKAL 141 Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 6/47 (12%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44 S +I + A RL ++ NM+N +T G ++ V F ++ Sbjct: 6 SMDIAASGLTAQRLRLDIISQNMANVNTTRTAEGGPYKRKTVIFEQM 52 >gi|227112519|ref|ZP_03826175.1| flagellar basal body rod protein FlgC [Pectobacterium carotovorum subsp. brasiliensis PBR1692] gi|227328336|ref|ZP_03832360.1| flagellar basal body rod protein FlgC [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 134 Score = 57.6 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 7/44 (15%), Positives = 22/44 (50%) Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +G++ N + + EM I ++ + + +++ + ML+ + Sbjct: 88 QGYVRMPNVDPVAEMVNTISASRSYQANVEVLNTTKSMMLKTLT 131 Score = 37.2 bits (84), Expect = 1.9, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 6/47 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42 F I +A A QRL+ A N++N G +R +V F Sbjct: 4 LNIFEISGSALSAQSQRLNVSASNLANADSVTGPDGEPYRAKQVVFE 50 >gi|188586015|ref|YP_001917560.1| flagellar basal-body rod protein FlgC [Natranaerobius thermophilus JW/NM-WN-LF] gi|179350702|gb|ACB84972.1| flagellar basal-body rod protein FlgC [Natranaerobius thermophilus JW/NM-WN-LF] Length = 146 Score = 57.6 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 19/42 (45%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G+++ N + EM MI ++ + + T ID + + Sbjct: 101 GYVQKPNVEIVKEMTDMITASRAYEANATAIDNAKSMASNTL 142 Score = 54.9 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 22/49 (44%), Gaps = 6/49 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43 M +F+I + A R+ +++N++N +T G +R F Sbjct: 1 MFDTFDISGSGLTAERLRMDVISNNIANANTTRTEDGEPYRRQMPVFET 49 >gi|253688974|ref|YP_003018164.1| flagellar basal-body rod protein FlgC [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251755552|gb|ACT13628.1| flagellar basal-body rod protein FlgC [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 134 Score = 57.6 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 7/44 (15%), Positives = 22/44 (50%) Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +G++ N + + EM I ++ + + +++ + ML+ + Sbjct: 88 QGYVRMPNVDPVAEMVNTISASRSYQANVEVLNTTKSMMLKTLT 131 Score = 37.2 bits (84), Expect = 2.0, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 6/47 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42 F I +A A QRL+ A N++N G +R +V F Sbjct: 4 LNIFEISGSALSAQSQRLNVSASNLANADSVTGPDGEPYRAKQVVFE 50 >gi|297617136|ref|YP_003702295.1| flagellar basal-body rod protein FlgC [Syntrophothermus lipocalidus DSM 12680] gi|297144973|gb|ADI01730.1| flagellar basal-body rod protein FlgC [Syntrophothermus lipocalidus DSM 12680] Length = 145 Score = 57.6 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 9/44 (20%), Positives = 23/44 (52%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 + G++ N N + EM MI T+ + + + ++ + ++A+ Sbjct: 98 QDGYVNMPNVNVVSEMVDMISATRAYEANVSAVEATKSMAMKAL 141 Score = 55.6 bits (132), Expect = 5e-06, Method: Composition-based stats. Identities = 11/48 (22%), Positives = 22/48 (45%), Gaps = 6/48 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43 +F+I + A R+ +++N++N +T G +R V F Sbjct: 4 LNAFDISASGMTAQRLRMDVISNNLANVNTTRTPQGGPYRRQMVIFEA 51 >gi|325295411|ref|YP_004281925.1| flagellar basal-body rod protein FlgC [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065859|gb|ADY73866.1| flagellar basal-body rod protein FlgC [Desulfurobacterium thermolithotrophum DSM 11699] Length = 135 Score = 57.6 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 24/47 (51%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G+++ N + + EM MI + + + T + ++ +L AI + + Sbjct: 89 GYVKLPNVDPIREMVDMISAMRTYEANLTAFNTHKGMLLNAIDILKA 135 Score = 43.3 bits (100), Expect = 0.028, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 19/57 (33%), Gaps = 6/57 (10%) Query: 1 MQ-TSFNIGLAAQLALEQRLSTVADNMSNTDTV---G--FRTIKVKFSEVVGAIKND 51 M + L R+ + N++N ++V G +R F V+ Sbjct: 1 MIFKGLEVSLTGMEVQRVRIDIHSSNLANANSVDENGNPYRRKIPIFESVLEKTAKG 57 >gi|292492369|ref|YP_003527808.1| flagellar hook-associated protein FlgK [Nitrosococcus halophilus Nc4] gi|291580964|gb|ADE15421.1| flagellar hook-associated protein FlgK [Nitrosococcus halophilus Nc4] Length = 647 Score = 57.6 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 32/79 (40%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 +IGL+ LA+++ L+T + N++N +T GF + + S + + Sbjct: 7 LSIGLSGLLAMQRSLATTSHNIANVNTPGFSRQRTELSASLPESTAKGFIGTGVNVATVR 66 Query: 65 YLSKEVGSFISTGTELDFA 83 + G ++A Sbjct: 67 RAYDAFLTEQVQGYTSEYA 85 Score = 40.6 bits (93), Expect = 0.20, Method: Composition-based stats. Identities = 6/41 (14%), Positives = 13/41 (31%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E ++ Q F + +I + + + Sbjct: 606 SGVNLEEEAANLLRFQQAFQAAARVISVADDMFQSLLGAVG 646 >gi|323163702|gb|EFZ49522.1| flagellar basal-body rod protein flgF domain protein [Escherichia coli E128010] Length = 75 Score = 57.6 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 27/67 (40%) Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 S S L+ + V G LE SN N++ M MI ++F +I + + Sbjct: 6 SAESQATRGPILQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNA 65 Query: 235 LEAIRNI 241 A + + Sbjct: 66 GRANQLL 72 >gi|53717912|ref|YP_106898.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei K96243] gi|53724563|ref|YP_104796.1| flagellar basal body rod protein FlgC [Burkholderia mallei ATCC 23344] gi|76809289|ref|YP_331878.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei 1710b] gi|121599639|ref|YP_994289.1| flagellar basal body rod protein FlgC [Burkholderia mallei SAVP1] gi|124385719|ref|YP_001028062.1| flagellar basal body rod protein FlgC [Burkholderia mallei NCTC 10229] gi|126439110|ref|YP_001057320.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei 668] gi|126450357|ref|YP_001082869.1| flagellar basal body rod protein FlgC [Burkholderia mallei NCTC 10247] gi|126454889|ref|YP_001064562.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei 1106a] gi|134283634|ref|ZP_01770333.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei 305] gi|167001534|ref|ZP_02267329.1| flagellar basal-body rod protein FlgC [Burkholderia mallei PRL-20] gi|167717658|ref|ZP_02400894.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei DM98] gi|167736701|ref|ZP_02409475.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei 14] gi|167813799|ref|ZP_02445479.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei 91] gi|167822316|ref|ZP_02453787.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei 9] gi|167843906|ref|ZP_02469414.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei B7210] gi|167892408|ref|ZP_02479810.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei 7894] gi|167900906|ref|ZP_02488111.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei NCTC 13177] gi|167909125|ref|ZP_02496216.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei 112] gi|167917162|ref|ZP_02504253.1| flagellar basal body rod protein FlgC [Burkholderia pseudomallei BCC215] gi|217424916|ref|ZP_03456412.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei 576] gi|226199800|ref|ZP_03795351.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei Pakistan 9] gi|237810459|ref|YP_002894910.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei MSHR346] gi|238562527|ref|ZP_00440313.2| flagellar basal-body rod protein FlgC [Burkholderia mallei GB8 horse 4] gi|242316173|ref|ZP_04815189.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei 1106b] gi|254174790|ref|ZP_04881451.1| flagellar basal-body rod protein FlgC [Burkholderia mallei ATCC 10399] gi|254182142|ref|ZP_04888739.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei 1655] gi|254188072|ref|ZP_04894584.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei Pasteur 52237] gi|254197006|ref|ZP_04903430.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei S13] gi|254201894|ref|ZP_04908258.1| flagellar basal-body rod protein FlgC [Burkholderia mallei FMH] gi|254207228|ref|ZP_04913579.1| flagellar basal-body rod protein FlgC [Burkholderia mallei JHU] gi|254258642|ref|ZP_04949696.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei 1710a] gi|254295812|ref|ZP_04963269.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei 406e] gi|254359730|ref|ZP_04976001.1| flagellar basal-body rod protein FlgC [Burkholderia mallei 2002721280] gi|42766726|gb|AAS45446.1| putative flagellar biosynthesis protein [Burkholderia pseudomallei] gi|52208326|emb|CAH34259.1| flagellar basal-body rod protein [Burkholderia pseudomallei K96243] gi|52427986|gb|AAU48579.1| flagellar basal-body rod protein FlgC [Burkholderia mallei ATCC 23344] gi|76578742|gb|ABA48217.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei 1710b] gi|121228449|gb|ABM50967.1| flagellar basal-body rod protein FlgC [Burkholderia mallei SAVP1] gi|124293739|gb|ABN03008.1| flagellar basal-body rod protein FlgC [Burkholderia mallei NCTC 10229] gi|126218603|gb|ABN82109.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei 668] gi|126228531|gb|ABN92071.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei 1106a] gi|126243227|gb|ABO06320.1| flagellar basal-body rod protein FlgC [Burkholderia mallei NCTC 10247] gi|134245043|gb|EBA45138.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei 305] gi|147747788|gb|EDK54864.1| flagellar basal-body rod protein FlgC [Burkholderia mallei FMH] gi|147752770|gb|EDK59836.1| flagellar basal-body rod protein FlgC [Burkholderia mallei JHU] gi|148028944|gb|EDK86876.1| flagellar basal-body rod protein FlgC [Burkholderia mallei 2002721280] gi|157805705|gb|EDO82875.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei 406e] gi|157935752|gb|EDO91422.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei Pasteur 52237] gi|160695835|gb|EDP85805.1| flagellar basal-body rod protein FlgC [Burkholderia mallei ATCC 10399] gi|169653749|gb|EDS86442.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei S13] gi|184212680|gb|EDU09723.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei 1655] gi|217391936|gb|EEC31962.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei 576] gi|225928151|gb|EEH24187.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei Pakistan 9] gi|237504017|gb|ACQ96335.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei MSHR346] gi|238522487|gb|EEP85931.1| flagellar basal-body rod protein FlgC [Burkholderia mallei GB8 horse 4] gi|242139412|gb|EES25814.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei 1106b] gi|243062736|gb|EES44922.1| flagellar basal-body rod protein FlgC [Burkholderia mallei PRL-20] gi|254217331|gb|EET06715.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei 1710a] Length = 141 Score = 57.6 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 10/49 (20%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 + G++ N + + EM MI ++ + + ++ ++ ML+ + I S Sbjct: 94 QNGYVTMPNVDPVQEMVNMISASRSYQANVETLNTAKQLMLKTL-TIGS 141 Score = 43.3 bits (100), Expect = 0.027, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 34/99 (34%), Gaps = 7/99 (7%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSEVVGAIKNDIDQK 55 F++ +A A QRL+ A N++N G ++ +V F+ + Sbjct: 5 MNIFDVAGSAMSAQSQRLNVTASNLANADSVTGPDGKPYKAKQVVFATAPMGRARTASGQ 64 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES 94 + + + + + A + + + + + Sbjct: 65 GVGGVQVSKVID-DPSPMKTAYDPSNPAADQNGYVTMPN 102 >gi|115353120|ref|YP_774959.1| flagellar basal body rod protein FlgC [Burkholderia ambifaria AMMD] gi|170703094|ref|ZP_02893914.1| flagellar basal-body rod protein FlgC [Burkholderia ambifaria IOP40-10] gi|171321836|ref|ZP_02910737.1| flagellar basal-body rod protein FlgC [Burkholderia ambifaria MEX-5] gi|172061974|ref|YP_001809626.1| flagellar basal body rod protein FlgC [Burkholderia ambifaria MC40-6] gi|115283108|gb|ABI88625.1| flagellar basal-body rod protein FlgC [Burkholderia ambifaria AMMD] gi|170131991|gb|EDT00499.1| flagellar basal-body rod protein FlgC [Burkholderia ambifaria IOP40-10] gi|171092874|gb|EDT38126.1| flagellar basal-body rod protein FlgC [Burkholderia ambifaria MEX-5] gi|171994491|gb|ACB65410.1| flagellar basal-body rod protein FlgC [Burkholderia ambifaria MC40-6] Length = 141 Score = 57.6 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G+++ N + + EM MI ++ + + ++ + ML+ + I S Sbjct: 96 GYVQMPNVDPVQEMVNMISASRSYQANVETLNTAKTLMLKTL-TIGS 141 Score = 41.4 bits (95), Expect = 0.10, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 34/105 (32%), Gaps = 7/105 (6%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDT-VG-----FRTIKVKFS-EVVGAIKNDIDQ 54 F + +A A QRL+ A N++N D+ G ++ +V F+ + +G + Q Sbjct: 5 MNIFGVAGSALSAQSQRLNVTASNLANADSATGPDGKPYKAKQVVFATDPMGGARTASGQ 64 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 + V K G P + Sbjct: 65 GVGGVRVTKVMDDPSPMKSTYDPANPSADANGYVQMPNVDPVQEM 109 >gi|154250382|ref|YP_001411207.1| flagellar basal-body rod protein FlgC [Fervidobacterium nodosum Rt17-B1] gi|154154318|gb|ABS61550.1| flagellar basal-body rod protein FlgC [Fervidobacterium nodosum Rt17-B1] Length = 138 Score = 57.6 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 23/43 (53%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G+++ N N + EM MI+ + + + T I+ + + A++ Sbjct: 93 GYVKLPNVNIVREMVDMINAQRAYEANATAINTTKAMINAALQ 135 Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 34/85 (40%), Gaps = 6/85 (7%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDIDQKI 56 NI A R+ ++ N++N++T G +R F EV+ IK + + Sbjct: 6 NIMNISATGLSAQRFRIEVISTNIANSETTRTENGGPYRRKVPVFQEVLRNIKGNQENGG 65 Query: 57 SFVASGKEYLSKEVGSFISTGTELD 81 V S E S+ + T + D Sbjct: 66 VMVKSIYEDPSEYRIVYDPTHPDAD 90 >gi|107023955|ref|YP_622282.1| flagellar basal body rod protein FlgC [Burkholderia cenocepacia AU 1054] gi|116691042|ref|YP_836665.1| flagellar basal body rod protein FlgC [Burkholderia cenocepacia HI2424] gi|170734376|ref|YP_001766323.1| flagellar basal body rod protein FlgC [Burkholderia cenocepacia MC0-3] gi|206558966|ref|YP_002229726.1| flagellar basal body rod protein FlgC [Burkholderia cenocepacia J2315] gi|105894144|gb|ABF77309.1| flagellar basal-body rod protein FlgC [Burkholderia cenocepacia AU 1054] gi|116649131|gb|ABK09772.1| flagellar basal-body rod protein FlgC [Burkholderia cenocepacia HI2424] gi|169817618|gb|ACA92201.1| flagellar basal-body rod protein FlgC [Burkholderia cenocepacia MC0-3] gi|198035003|emb|CAR50875.1| flagellar basal-body rod protein FlgC (putative proximal rod protein) [Burkholderia cenocepacia J2315] Length = 141 Score = 57.6 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G+++ N + + EM MI ++ + + ++ + ML+ + I S Sbjct: 96 GYVQMPNVDPVQEMVNMISASRSYQANVETLNTAKTLMLKTL-TIGS 141 Score = 41.4 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 34/105 (32%), Gaps = 7/105 (6%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDT-VG-----FRTIKVKFS-EVVGAIKNDIDQ 54 F + +A A QRL+ A N++N D+ G ++ +V F+ + +G + Q Sbjct: 5 MNIFGVAGSALSAQSQRLNVTASNLANADSATGPDGKPYKAKQVVFATDPMGGARTASGQ 64 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 + V K G P + Sbjct: 65 GVGGVRVTKVMDDPSPMKSTYDPANPAADANGYVQMPNVDPVQEM 109 >gi|302392398|ref|YP_003828218.1| flagellar basal-body rod protein FlgC [Acetohalobium arabaticum DSM 5501] gi|302204475|gb|ADL13153.1| flagellar basal-body rod protein FlgC [Acetohalobium arabaticum DSM 5501] Length = 145 Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 18/136 (13%), Positives = 39/136 (28%), Gaps = 9/136 (6%) Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171 G VS+SG + + G +K V + + Sbjct: 6 GMNVSSSGMTAQRLRMDLISNNIANINTTRTDDGGPYKKKSPVFKAKNDQGFSLPNSDAQ 65 Query: 172 RENSGISPNIPPTPLEDLSGVTVKR---------GFLEDSNANSMYEMGQMIHLTQKFNS 222 G + V G++E N + EM M+ ++ + + Sbjct: 66 SNQVGQGVEVSSIKESSKPPKLVYNPQHPDANEEGYVEMPNIDIASEMVDMVSASRAYEA 125 Query: 223 ITTLIDENEKSMLEAI 238 T ++ +++ A+ Sbjct: 126 NVTALNTSKQMAKSAL 141 Score = 49.9 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 8/47 (17%), Positives = 20/47 (42%), Gaps = 6/47 (12%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43 + N+ + A R+ +++N++N +T G ++ F Sbjct: 5 SGMNVSSSGMTAQRLRMDLISNNIANINTTRTDDGGPYKKKSPVFKA 51 >gi|83310488|ref|YP_420752.1| flagellar hook protein FlgE [Magnetospirillum magneticum AMB-1] gi|82945329|dbj|BAE50193.1| Flagellar hook protein FlgE [Magnetospirillum magneticum AMB-1] Length = 545 Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 27/223 (12%), Positives = 67/223 (30%), Gaps = 29/223 (13%) Query: 1 MQTSFNIGLA-AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ----- 54 M + A ++ + +++ N++N +T G++ + F V+ Sbjct: 1 MLFGAFTNASQAMQTMDWAMGSISQNIANVNTTGYKEKETLFKTVLSETHTSPPTSQNSP 60 Query: 55 ---------KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR--------- 96 I V + + + G+ ++ T D A+ G +F + P Sbjct: 61 TKNTATTGLDIFGVRAVDRTMVSKSGTITASTTWSDMAINGRGFFIVTPPDSTGAPQTTL 120 Query: 97 ---GIILTRDGRFKVTDD--GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQK 151 + TR G F + + + ++ A+ + + K G+ S Sbjct: 121 SSSNTLYTRAGDFTQRAVNGNNYFTTADGNFLMGWAADNLGVVSKTLSPVYANLGQKSDG 180 Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTV 194 + + +V + + +T+ Sbjct: 181 MATTSIQLVANVPSNATMTGATKTFTDTTSVTDGFGTAQDLTM 223 Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 19/142 (13%), Positives = 39/142 (27%) Query: 96 RGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI 155 LT+ G V Y M V I + + V Sbjct: 399 DMRKLTQFSGETNNKLGVKVIDQNGYASGTMDKVEISTDGSVMAHYDNGESRRIFQIPVA 458 Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIH 215 + + +D G + R + + SG ++ E SN + +MI Sbjct: 459 SFVAPDQLDAISGTLFRATEQAGDMTVASISDQGSGASIVASATESSNVALEDQFTRMIV 518 Query: 216 LTQKFNSITTLIDENEKSMLEA 237 + ++ + + ++ Sbjct: 519 TQKAYSVNSNVFKTADEMTQTI 540 >gi|167835109|ref|ZP_02461992.1| flagellar basal body rod protein FlgC [Burkholderia thailandensis MSMB43] Length = 141 Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 10/49 (20%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 + G++ N + + EM MI ++ + + ++ ++ ML+ + I S Sbjct: 94 QNGYVTMPNVDPVQEMVNMISASRSYQANVETLNTAKQLMLKTL-TIGS 141 Score = 43.3 bits (100), Expect = 0.026, Method: Composition-based stats. Identities = 14/99 (14%), Positives = 35/99 (35%), Gaps = 7/99 (7%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSEVVGAIKNDIDQK 55 F++ +A A QRL+ A N++N G ++ +V F+ + Sbjct: 5 MNIFDVAGSAMSAQSQRLNVTASNLANADSVTGPDGKPYKAKQVVFATAPMGRARTASGQ 64 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES 94 + + + +T + A + + + + + Sbjct: 65 GVGGVQVTKVVD-DPSPMKTTYDPSNPAADQNGYVTMPN 102 >gi|83720057|ref|YP_440799.1| flagellar basal body rod protein FlgC [Burkholderia thailandensis E264] gi|167579486|ref|ZP_02372360.1| flagellar basal body rod protein FlgC [Burkholderia thailandensis TXDOH] gi|167617583|ref|ZP_02386214.1| flagellar basal body rod protein FlgC [Burkholderia thailandensis Bt4] gi|257140550|ref|ZP_05588812.1| flagellar basal body rod protein FlgC [Burkholderia thailandensis E264] gi|83653882|gb|ABC37945.1| flagellar basal-body rod protein FlgC [Burkholderia thailandensis E264] Length = 141 Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 10/49 (20%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 + G++ N + + EM MI ++ + + ++ ++ ML+ + I S Sbjct: 94 QNGYVTMPNVDPVQEMVNMISASRSYQANVETLNTAKQLMLKTL-TIGS 141 Score = 43.3 bits (100), Expect = 0.028, Method: Composition-based stats. Identities = 14/99 (14%), Positives = 35/99 (35%), Gaps = 7/99 (7%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSEVVGAIKNDIDQK 55 F++ +A A QRL+ A N++N G ++ +V F+ + Sbjct: 5 MNIFDVAGSAMSAQSQRLNVTASNLANADSVTGPDGKPYKAKQVVFATAPMGGARTASGQ 64 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES 94 + + + +T + A + + + + + Sbjct: 65 GVGGVQVTKVID-DPSPMKTTYDPSNPAADQNGYVTMPN 102 >gi|145297460|ref|YP_001140301.1| lateral flagellar hook-associated protein [Aeromonas salmonicida subsp. salmonicida A449] gi|142850232|gb|ABO88553.1| lateral flagellar hook-associated protein [Aeromonas salmonicida subsp. salmonicida A449] Length = 439 Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 30/61 (49%), Gaps = 2/61 (3%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV--VGAIKNDIDQKISFV 59 + NIGL+ A + L+ A N++N +T+G+ + + G + N + +++ V Sbjct: 1 MSMLNIGLSGLNAAQIALNVTAQNIANVNTIGYSRQEAMMGSLSGFGRLDNGMGVEVTGV 60 Query: 60 A 60 Sbjct: 61 R 61 Score = 39.1 bits (89), Expect = 0.57, Method: Composition-based stats. Identities = 5/38 (13%), Positives = 17/38 (44%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S N+ E +++ T+ + + +I +++ + Sbjct: 400 SGVNTDEEGVKIMAYTKAYQANAKVISTSDQLFNSILN 437 >gi|121607563|ref|YP_995370.1| flagellar basal-body rod protein FlgC [Verminephrobacter eiseniae EF01-2] gi|121552203|gb|ABM56352.1| flagellar basal-body rod protein FlgC [Verminephrobacter eiseniae EF01-2] Length = 134 Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 9/45 (20%), Positives = 25/45 (55%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +G++ SN N++ EM MI + + + +++ + +L+ ++ Sbjct: 87 AQGYVTHSNVNAVQEMVDMISAARSYQNNVEVMNTAKSLLLKTLQ 131 Score = 42.5 bits (98), Expect = 0.049, Method: Composition-based stats. Identities = 16/81 (19%), Positives = 32/81 (39%), Gaps = 6/81 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQ 54 M + FN+ +A A QRL+ VA N++N D V ++ +V F + Sbjct: 3 MLSIFNLSGSAISAQAQRLNVVASNLANVDAVAGPDGQPYKARQVVFQTAPMGAPSAAGV 62 Query: 55 KISFVASGKEYLSKEVGSFIS 75 ++ ++ + + Sbjct: 63 RVIAISESQVPGRRVHDPGHP 83 >gi|50120637|ref|YP_049804.1| flagellar basal body rod protein FlgC [Pectobacterium atrosepticum SCRI1043] gi|49611163|emb|CAG74609.1| flagellar basal-body rod protein [Pectobacterium atrosepticum SCRI1043] Length = 134 Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 7/44 (15%), Positives = 22/44 (50%) Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +G++ N + + EM I ++ + + +++ + ML+ + Sbjct: 88 QGYVRMPNVDPVAEMVNTISASRSYQANVEVLNTTKSMMLKTLT 131 Score = 37.2 bits (84), Expect = 2.3, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 6/47 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42 F I +A A QRL+ A N++N G +R +V F Sbjct: 4 LNIFEISGSALSAQSQRLNVSASNLANADSVTGPDGQPYRAKQVVFE 50 >gi|330818587|ref|YP_004362292.1| flagellar basal-body rod protein FlgC [Burkholderia gladioli BSR3] gi|327370980|gb|AEA62336.1| flagellar basal-body rod protein FlgC [Burkholderia gladioli BSR3] Length = 141 Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G++ N + + EM MI ++ + + ++ ++ ML+ + I S Sbjct: 96 GYVTMPNVDPVQEMVNMISASRSYQANVETLNTAKQLMLKTL-TIGS 141 Score = 39.9 bits (91), Expect = 0.29, Method: Composition-based stats. Identities = 14/99 (14%), Positives = 33/99 (33%), Gaps = 7/99 (7%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSEVVGAIKNDIDQK 55 F++ +A A QRL+ A N++N G +R +V F + Sbjct: 5 MNIFDVAGSAMSAESQRLNVTASNLANADSVTGPDGKPYRAKQVVFETQPVGNARTRSGQ 64 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES 94 + + + + + A + + + + + Sbjct: 65 GVG-GVQVKQVIDDPSPMKTNYDPSNPAADANGYVTMPN 102 >gi|169831914|ref|YP_001717896.1| flagellar basal-body rod protein FlgB [Candidatus Desulforudis audaxviator MP104C] gi|169638758|gb|ACA60264.1| flagellar basal-body rod protein FlgB [Candidatus Desulforudis audaxviator MP104C] Length = 132 Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 20/42 (47%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 A R +A N++N +T GF+ +V F + A +D Sbjct: 14 ALDGQAVRQRVIAHNIANLNTPGFKRSRVDFQAFMQAALDDS 55 >gi|150021011|ref|YP_001306365.1| flagellar basal-body rod protein FlgC [Thermosipho melanesiensis BI429] gi|149793532|gb|ABR30980.1| flagellar basal-body rod protein FlgC [Thermosipho melanesiensis BI429] Length = 137 Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 22/43 (51%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G+++ N N + EM MI+ + + + T + + + A++ Sbjct: 92 GYVKLPNVNVVREMVDMINAQRAYEANVTAFNTTKAMINSALQ 134 Score = 52.2 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 15/85 (17%), Positives = 31/85 (36%), Gaps = 6/85 (7%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDIDQKI 56 I A R+ + +N++N++T G +R F E++ ++ ++ Sbjct: 5 NIMTIAATGMSAQRLRIDVITNNLANSETTRTEKGEPYRRKVPVFQELLRNVRGRLENGG 64 Query: 57 SFVASGKEYLSKEVGSFISTGTELD 81 V E S + T + D Sbjct: 65 VVVKEIYEDQSPFRVVYDPTHPDAD 89 >gi|147678426|ref|YP_001212641.1| flagellar basal body rod protein [Pelotomaculum thermopropionicum SI] gi|146274523|dbj|BAF60272.1| flagellar basal body rod protein [Pelotomaculum thermopropionicum SI] Length = 147 Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 32/82 (39%), Gaps = 9/82 (10%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVG---------FRTIKVKFSEVVGAIKNDIDQ 54 SF I + A RL +++N++N +T G +R F++V+ +++ Sbjct: 6 SFAISASGLTAERLRLDLISNNIANMNTAGRPDDPAVPAYRRRFPVFAQVLQEVRSAGTA 65 Query: 55 KISFVASGKEYLSKEVGSFIST 76 + + +G + Sbjct: 66 RPRYKGAGVRVIRIVEDHSPPR 87 Score = 56.4 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 1/46 (2%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G++ N N + EM MI T+ + + T ++ + L+AI I Sbjct: 101 GYVAYPNINIVNEMINMITATRSYEANVTALNAAKDIALKAI-EIG 145 >gi|118581824|ref|YP_903074.1| flagellar basal-body rod protein FlgC [Pelobacter propionicus DSM 2379] gi|118504534|gb|ABL01017.1| flagellar basal-body rod protein FlgC [Pelobacter propionicus DSM 2379] Length = 145 Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 22/43 (51%) Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 +G++ N N + EM MI ++ + + T + + L+A+ Sbjct: 99 QGYVAMPNVNVIEEMADMIGASRTYEANVTAVQTAKSMALKAL 141 Score = 42.2 bits (97), Expect = 0.058, Method: Composition-based stats. Identities = 9/51 (17%), Positives = 23/51 (45%), Gaps = 8/51 (15%) Query: 1 MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43 M ++ N+ +A A R++ ++ N++N + G ++ F+ Sbjct: 1 MDFFSAMNVSASALSAERTRMNLISSNLANANATRTPEGGPYKRKDAVFAA 51 >gi|261821151|ref|YP_003259257.1| flagellar basal body rod protein FlgC [Pectobacterium wasabiae WPP163] gi|261605164|gb|ACX87650.1| flagellar basal-body rod protein FlgC [Pectobacterium wasabiae WPP163] Length = 134 Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 6/44 (13%), Positives = 22/44 (50%) Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +G++ N + + EM I ++ + + +++ + M++ + Sbjct: 88 QGYVRMPNVDPVAEMVNTISASRSYQANVEVLNTTKSMMMKTLT 131 Score = 36.8 bits (83), Expect = 3.1, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 6/47 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42 F I +A A QRL+ A N++N G +R +V F Sbjct: 4 LNIFEISGSALSAQSQRLNVSASNLANADSVTGPDGEPYRAKQVVFE 50 >gi|307546970|ref|YP_003899449.1| flagellar basal body rod protein FlgC [Halomonas elongata DSM 2581] gi|307218994|emb|CBV44264.1| flagellar basal body rod protein FlgC [Halomonas elongata DSM 2581] Length = 135 Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 9/44 (20%), Positives = 25/44 (56%) Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +G+++ N + EM MI ++ + + ++D N++ +L+ + Sbjct: 88 QGYVDMPNVDPAAEMVNMISASRSYQANVEVMDTNKQLLLKTLS 131 Score = 42.2 bits (97), Expect = 0.064, Method: Composition-based stats. Identities = 16/81 (19%), Positives = 30/81 (37%), Gaps = 6/81 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQ 54 M + F I +A A QR++ A N++N D+V +R +V F + Sbjct: 3 MFSVFEISGSAMSAQSQRMNVTASNLANADSVAGPDGEAYRAKQVLFETRAQSRTGVGGV 62 Query: 55 KISFVASGKEYLSKEVGSFIS 75 + V + ++ Sbjct: 63 GVREVIEDPSPMRRQYRPEHP 83 >gi|167630286|ref|YP_001680785.1| flagellar basal-body rod protein flgb, putative [Heliobacterium modesticaldum Ice1] gi|167593026|gb|ABZ84774.1| flagellar basal-body rod protein flgb, putative [Heliobacterium modesticaldum Ice1] Length = 137 Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 28/57 (49%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLS 67 A R +ADN++N DT G++ +V+F + + A+ + ++ S ++ Sbjct: 16 GLDAASTRHQVIADNLANVDTPGYKRKEVQFEDELAAVIDREASGMTGKRSDPRHIP 72 >gi|89092134|ref|ZP_01165089.1| flagellar basal-body rod protein FlgC [Oceanospirillum sp. MED92] gi|89083869|gb|EAR63086.1| flagellar basal-body rod protein FlgC [Oceanospirillum sp. MED92] Length = 145 Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 24/44 (54%) Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +GF+ N N + EM MI ++ F T +++ ++ + + IR Sbjct: 98 QGFVYYPNVNVVEEMADMISASRSFQINTEIMNTAKQMLQQTIR 141 >gi|224825170|ref|ZP_03698276.1| flagellar hook-associated protein FlgK [Lutiella nitroferrum 2002] gi|224602841|gb|EEG09018.1| flagellar hook-associated protein FlgK [Lutiella nitroferrum 2002] Length = 598 Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 28/183 (15%), Positives = 55/183 (30%), Gaps = 4/183 (2%) Query: 1 MQTSFN-IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN-DIDQKISF 58 M TS IG++ A + L+ + N+SN +T G+ + + + + Sbjct: 1 MGTSIFSIGVSGLNAAQGALTVTSHNISNVNTAGYTRQVTQQAARYPQSASYGFIGQGVD 60 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK--VTDDGSLVS 116 + + + + D G F + + + G GSL + Sbjct: 61 LTHVNRVYDDYLTQQVQSAQATDSYYSGQLDFLKQVDSLMADSTVGVSPSLQDFFGSLQT 120 Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 S + I Q G++ + ++T SVD G + Sbjct: 121 LSSDPSAIPSRQTAINNAQALATKFRTLDGQLQEMASGVSTRIKASVDTINGLASQIADL 180 Query: 177 ISP 179 Sbjct: 181 NQR 183 Score = 39.5 bits (90), Expect = 0.41, Method: Composition-based stats. Identities = 6/38 (15%), Positives = 15/38 (39%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S N E +I Q + + + +I ++ ++ Sbjct: 559 SGVNLDEEAANLIKYQQAYQASSKVIQIAQQLFSSLLQ 596 >gi|188586014|ref|YP_001917559.1| flagellar basal-body rod protein FlgB [Natranaerobius thermophilus JW/NM-WN-LF] gi|179350701|gb|ACB84971.1| flagellar basal-body rod protein FlgB [Natranaerobius thermophilus JW/NM-WN-LF] Length = 134 Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 15/98 (15%), Positives = 37/98 (37%), Gaps = 3/98 (3%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSK- 68 + +R +++N++N +T GF+ +V F E + + I + ++++ Sbjct: 12 NSLNGTTKRHEVISNNIANVNTPGFKRGRVDFEEQLKEAMKADSKDIEGKITREKHIPIG 71 Query: 69 --EVGSFISTGTELDFALEGDAWFALESPRGIILTRDG 104 + E D ++ D LT++ Sbjct: 72 KVDSTIEPQVRRESDSSMRNDDNNVDVDTEMSRLTQNS 109 >gi|92114100|ref|YP_574028.1| flagellar basal-body rod protein FlgC [Chromohalobacter salexigens DSM 3043] gi|91797190|gb|ABE59329.1| flagellar basal-body rod protein FlgC [Chromohalobacter salexigens DSM 3043] Length = 135 Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 22/43 (51%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N + + EM MI ++ + + +++ ++ M + + Sbjct: 89 GYVAMPNVDPVDEMVDMIAASRSYQANVEVMNTSKSLMQQTLS 131 >gi|317129211|ref|YP_004095493.1| flagellar basal-body rod protein FlgC [Bacillus cellulosilyticus DSM 2522] gi|315474159|gb|ADU30762.1| flagellar basal-body rod protein FlgC [Bacillus cellulosilyticus DSM 2522] Length = 148 Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 26/46 (56%), Gaps = 1/46 (2%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G++E N + + EM ++ T+ + + T +D ++ +L+A+ I Sbjct: 103 GYVELPNVDPLKEMIDLMSATRSYEANVTTLDAHKNMLLKAL-EIG 147 Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 10/29 (34%), Positives = 14/29 (48%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTV 32 N +A A R+ V+ NM+N DT Sbjct: 6 GINTSASALTAQRLRMDVVSSNMANADTT 34 >gi|330447910|ref|ZP_08311558.1| flagellar hook-associated protein FlgK [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328492101|dbj|GAA06055.1| flagellar hook-associated protein FlgK [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 455 Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 15/72 (20%), Positives = 26/72 (36%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 NIGL+ A + L A N++N +TVG+ + S + G + + Sbjct: 1 MNMINIGLSGLNANKTALDVTAHNVANVNTVGYSRQQAMMSALAGRELFSAGSGVEVDSI 60 Query: 62 GKEYLSKEVGSF 73 + V Sbjct: 61 RRVSDQFIVKQM 72 Score = 36.4 bits (82), Expect = 3.5, Method: Composition-based stats. Identities = 7/40 (17%), Positives = 15/40 (37%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 S NS E ++ T + + +I + +R + Sbjct: 416 SAVNSDEEAANLMTFTNAYQANMKVISTANELFDSVLRLL 455 >gi|138894738|ref|YP_001125191.1| flagellar basal body rod protein FlgC [Geobacillus thermodenitrificans NG80-2] gi|196247641|ref|ZP_03146343.1| flagellar basal-body rod protein FlgC [Geobacillus sp. G11MC16] gi|134266251|gb|ABO66446.1| Flagellar basal-body rod protein [Geobacillus thermodenitrificans NG80-2] gi|196212425|gb|EDY07182.1| flagellar basal-body rod protein FlgC [Geobacillus sp. G11MC16] Length = 150 Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 23/116 (19%), Positives = 35/116 (30%), Gaps = 17/116 (14%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV------G----FRTIKVK-------FSE 43 M S NI +A A R+ ++ N++N DT G +R V FS Sbjct: 3 MFQSLNISASALTAQRLRMDVISSNIANVDTTRARLVNGEWEPYRRKVVVVEPRGEQFSS 62 Query: 44 VVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 + A D S V + + D +G P + Sbjct: 63 YLQAALGRTDAVGSGVRVREIVDDPAPFKLLYDPDHPDAGDDGYVRLPNVDPLKEM 118 Score = 56.8 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 9/46 (19%), Positives = 25/46 (54%), Gaps = 1/46 (2%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G++ N + + EM +I T+ + + T ++ ++ +++A+ I Sbjct: 105 GYVRLPNVDPLKEMVDLIGATRSYEANVTALNASKGMLMKAL-EIG 149 >gi|332669180|ref|YP_004452188.1| flagellar hook-associated protein FlgK [Cellulomonas fimi ATCC 484] gi|332338218|gb|AEE44801.1| flagellar hook-associated protein FlgK [Cellulomonas fimi ATCC 484] Length = 480 Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 29/88 (32%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 + L++ +A Q L N++N +TVG+ + S + A + G Sbjct: 5 SGLGTALSSLIAQRQALDVAGQNVANANTVGYTRQRASMSALPAAQVPSMFSVNHGAGEG 64 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWF 90 E + L G ++ Sbjct: 65 VRVTGIERLGDVFLDMRLRTQTGGASYL 92 Score = 48.3 bits (113), Expect = 9e-04, Method: Composition-based stats. Identities = 6/55 (10%), Positives = 22/55 (40%) Query: 188 DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 + + VT ++ L ++ ++ E M+ + + ++ ++ + I Sbjct: 422 ESARVTAQQQQLAATSVDTDEETVNMLAFQRAYEGAARVLTAVDEMLDTLINRTG 476 >gi|284041507|ref|YP_003391847.1| flagellar basal-body rod protein FlgC [Conexibacter woesei DSM 14684] gi|283945728|gb|ADB48472.1| flagellar basal-body rod protein FlgC [Conexibacter woesei DSM 14684] Length = 149 Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 7/46 (15%), Positives = 21/46 (45%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G++ N N + EM +I ++ + + T + ++ + + + Sbjct: 104 GYVAMPNVNPVTEMVDLISSSRSYEANVTAMQSAKQMFTKTLELLR 149 Score = 40.6 bits (93), Expect = 0.18, Method: Composition-based stats. Identities = 7/29 (24%), Positives = 14/29 (48%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTV 32 + +I + A R+ A+N++N T Sbjct: 6 AIDIAGSGLTAERLRMDVTAENLANAQTT 34 >gi|291278935|ref|YP_003495770.1| flagellar basal-body rod protein FlgC [Deferribacter desulfuricans SSM1] gi|290753637|dbj|BAI80014.1| flagellar basal-body rod protein FlgC [Deferribacter desulfuricans SSM1] Length = 134 Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 10/46 (21%), Positives = 25/46 (54%), Gaps = 1/46 (2%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G++ N N + EM M+ ++ + + T+++ ++ L+A+ I Sbjct: 88 GYVAYPNINPIEEMVNMLEASRSYEANVTVLNTAKQLALKAL-EIG 132 Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 14/101 (13%), Positives = 28/101 (27%), Gaps = 6/101 (5%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDIDQKISF 58 I A R++ ++ N++N +T G ++ +V F ++ + Sbjct: 7 LKIASTGLSAQRIRINVISSNLANANTTRTEDGTPYQKREVIFRTILDGELRGGVRVEKV 66 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 V K + K E A Sbjct: 67 VRDEKPPILKYEPGHPDANEEGYVAYPNINPIEEMVNMLEA 107 >gi|94500239|ref|ZP_01306772.1| flagellar basal-body rod protein FlgC [Oceanobacter sp. RED65] gi|94427538|gb|EAT12515.1| flagellar basal-body rod protein FlgC [Oceanobacter sp. RED65] Length = 148 Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 6/43 (13%), Positives = 19/43 (44%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N + EM M+ ++ + ++ ++ + + Sbjct: 103 GYVMYPNVNIVEEMTDMMSSSRSYQMNVEMMKTAKQMLQRTLT 145 Score = 40.6 bits (93), Expect = 0.20, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 6/48 (12%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEV 44 FN+ A RL+T A N++N +TV +R K F + Sbjct: 5 NVFNVAGTGMNAQSVRLNTTASNIANAETVSSSIDETYRARKPWFQAL 52 >gi|94266975|ref|ZP_01290624.1| conserved hypothetical protein [delta proteobacterium MLMS-1] gi|93452330|gb|EAT02961.1| conserved hypothetical protein [delta proteobacterium MLMS-1] Length = 118 Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 34/83 (40%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + L+ AL+Q+ S A N++N +T G++ +KV +E + + Sbjct: 1 MVSGIQAALSGLQALQQKNSATAHNVANVNTDGYKKVKVSLAETTPPGGVEARAEKIDTP 60 Query: 61 SGKEYLSKEVGSFISTGTELDFA 83 + G + + +D A Sbjct: 61 GPQVSEQTADGPELVEKSNVDLA 83 Score = 56.4 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 7/41 (17%), Positives = 18/41 (43%) Query: 199 LEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +E SN + EM M+ + F + ++ ++ + + Sbjct: 75 VEKSNVDLAEEMPNMMLSRRYFQANLKVVQTEDERLGNLLN 115 >gi|309388815|gb|ADO76695.1| flagellar basal-body rod protein FlgC [Halanaerobium praevalens DSM 2228] Length = 143 Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 20/43 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++E N + M EM MI ++ + + T I + A+ Sbjct: 98 GYVELPNVSVMTEMVNMIDASRAYEANTQAISNYKSMANSALN 140 Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 8/32 (25%), Positives = 16/32 (50%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32 M +I + A R+ T++ N++N +T Sbjct: 1 MFKGIDISASGLTAQRLRMDTISSNIANAETT 32 >gi|289523576|ref|ZP_06440430.1| flagellar basal-body rod protein FlgC [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503268|gb|EFD24432.1| flagellar basal-body rod protein FlgC [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 136 Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 23/47 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G++ N N + EM M+ T+ + + +++ ++ AI + S Sbjct: 90 GYVAYPNVNVVREMTDMMAATRAYEANLMVVESAKEIWGSAIDVLRS 136 Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 15/106 (14%), Positives = 33/106 (31%), Gaps = 7/106 (6%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDI-DQKI 56 S I ++ A + ++ N++N +T G +R F+E + A + ++ Sbjct: 6 SLEIAGSSLTAHRLWMDLISQNLANVNTTRTQDGGPYRRKVPIFAERLEAAEKGAKGVRV 65 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTR 102 + E + + E + TR Sbjct: 66 EKIEEDDLPPRMVYQPEHPDADEEGYVAYPNVNVVREMTDMMAATR 111 >gi|261419417|ref|YP_003253099.1| flagellar basal body rod protein FlgC [Geobacillus sp. Y412MC61] gi|319766232|ref|YP_004131733.1| flagellar basal-body rod protein FlgC [Geobacillus sp. Y412MC52] gi|261375874|gb|ACX78617.1| flagellar basal-body rod protein FlgC [Geobacillus sp. Y412MC61] gi|317111098|gb|ADU93590.1| flagellar basal-body rod protein FlgC [Geobacillus sp. Y412MC52] Length = 150 Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 40/114 (35%), Gaps = 3/114 (2%) Query: 129 VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED 188 V + + E S G + A +G VR +P Sbjct: 39 VNGEWEPYRRKMVIIEPQSGSFSGYLQAALGRADAVDGGVQVREIVDDPAPFKLVYDPNH 98 Query: 189 LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G++ N + + EM +I T+ + + T+++ ++ +++A+ I Sbjct: 99 PDAG--ADGYVRLPNVDPLKEMVDLIGATRSYEANVTVLNASKGMLMKAL-EIG 149 Score = 52.2 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 33/114 (28%), Gaps = 17/114 (14%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV------G----FRTIKV-------KFSEVV 45 S NI +A A R+ +A N++N DT G +R V FS + Sbjct: 5 QSLNISASALTAQRLRMDVIASNIANVDTTRARLVNGEWEPYRRKMVIIEPQSGSFSGYL 64 Query: 46 GAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 A D V + + D +G P + Sbjct: 65 QAALGRADAVDGGVQVREIVDDPAPFKLVYDPNHPDAGADGYVRLPNVDPLKEM 118 >gi|168334478|ref|ZP_02692649.1| Flagellar basal body rod protein [Epulopiscium sp. 'N.t. morphotype B'] Length = 153 Score = 56.8 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 21/42 (50%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++E N + + EM MI ++ + + T + + +A+ Sbjct: 108 GYVEMPNVDVVTEMVNMISASRSYEANVTAFNNLKSMNTKAL 149 Score = 44.5 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 11/85 (12%), Positives = 24/85 (28%), Gaps = 6/85 (7%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDIDQKI 56 + +I A RL + N++N ++ G ++ V F + + Sbjct: 5 SGMDIAATGLTAQRFRLDVITQNLANINSTRTPDGGPYQRRTVLFESIPMRDAANKLPDN 64 Query: 57 SFVASGKEYLSKEVGSFISTGTELD 81 + +G D Sbjct: 65 FHNILNRNLNMYHTSGVQVSGIVED 89 >gi|78224306|ref|YP_386053.1| flagellar basal-body rod protein FlgC [Geobacter metallireducens GS-15] gi|78195561|gb|ABB33328.1| Flagellar basal-body rod protein FlgC [Geobacter metallireducens GS-15] Length = 147 Score = 56.8 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 23/49 (46%), Gaps = 1/49 (2%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 +G++ N N + EM MI T+ + + T + + L+ + + S Sbjct: 99 AQGYVALPNVNVVEEMADMIAATRAYEANVTAVQAAKGMALKTL-ELGS 146 Score = 41.0 bits (94), Expect = 0.15, Method: Composition-based stats. Identities = 10/55 (18%), Positives = 24/55 (43%), Gaps = 8/55 (14%) Query: 1 MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGA 47 M ++ I +A A R++ ++ N++N ++ G ++ F+ A Sbjct: 1 MDFFSAMQISSSALSAERTRMNLISSNIANANSTRTAEGGPYKRKDAVFAATPAA 55 >gi|56419752|ref|YP_147070.1| flagellar basal body rod protein FlgC [Geobacillus kaustophilus HTA426] gi|56379594|dbj|BAD75502.1| flagellar basal-body rod protein [Geobacillus kaustophilus HTA426] Length = 150 Score = 56.8 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 9/46 (19%), Positives = 26/46 (56%), Gaps = 1/46 (2%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G++ N + + EM +I T+ + + T+++ ++ +++A+ I Sbjct: 105 GYVRLPNVDPLKEMVDLIGATRSYEANVTVLNASKGMLMKAL-EIG 149 Score = 52.6 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 33/114 (28%), Gaps = 17/114 (14%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV------G----FRTIKV-------KFSEVV 45 S NI +A A R+ +A N++N DT G +R V FS + Sbjct: 5 QSLNISASALTAQRLRMDVIASNIANVDTTRARLVNGEWEPYRRKMVIIEPRSGSFSGYL 64 Query: 46 GAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 A D V + + D +G P + Sbjct: 65 QAALGRADAVDGGVRVREIVDDPAPFKLVYDPNHPDAGADGYVRLPNVDPLKEM 118 >gi|119384843|ref|YP_915899.1| flagellar basal body rod protein FlgC [Paracoccus denitrificans PD1222] gi|119374610|gb|ABL70203.1| flagellar basal body rod protein [Paracoccus denitrificans PD1222] Length = 130 Score = 56.8 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 3/48 (6%) Query: 1 MQTSFNI---GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV 45 M S + ++ + RL +++N++N DT G+R V F E V Sbjct: 1 MTNSLSATELAVSGMKSQAVRLRHISENIANADTPGYRRKLVAFREQV 48 Score = 40.2 bits (92), Expect = 0.24, Method: Composition-based stats. Identities = 13/113 (11%), Positives = 36/113 (31%), Gaps = 3/113 (2%) Query: 131 IQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS 190 + + N+ + K++A G V P + Sbjct: 18 QAVRLRHISENIANADTPGYRRKLVAFREQVDFGRPTGAVTPGPPRFDRRELPRIHDPAH 77 Query: 191 GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS---MLEAIRN 240 + + G+ SN + + E+ + + + + +++ + +L+ IR Sbjct: 78 PMADEEGYYSGSNVDLIIEIADAKEAGRSYEANLRVFEQSRQMGSSLLDLIRR 130 >gi|83646783|ref|YP_435218.1| flagellar basal-body rod protein FlgC [Hahella chejuensis KCTC 2396] gi|83634826|gb|ABC30793.1| flagellar basal-body rod protein FlgC [Hahella chejuensis KCTC 2396] Length = 133 Score = 56.8 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G++E N + EM M+ T+ + + +++ + L+A+ I S Sbjct: 88 GYVEMPAINPVDEMTSMMLATRAYEANVSVLSAAKTMALKAL-EIGS 133 >gi|217077497|ref|YP_002335215.1| flagellar basal-body rod protein FlgC [Thermosipho africanus TCF52B] gi|217037352|gb|ACJ75874.1| flagellar basal-body rod protein FlgC [Thermosipho africanus TCF52B] Length = 137 Score = 56.8 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 22/43 (51%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G+++ N N + EM MI+ + + + T + + + A++ Sbjct: 92 GYVKLPNVNVVREMVDMINAQRAYEANVTAFNTTKAMINSALQ 134 Score = 51.8 bits (122), Expect = 7e-05, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 31/85 (36%), Gaps = 6/85 (7%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDIDQKI 56 I A R+ +++N++N++T G +R F E++ I ++ Sbjct: 5 NIMTISATGMSAQRLRIDVISNNLANSETTRTENGEPYRRKVPVFQELLRNINGRLENGG 64 Query: 57 SFVASGKEYLSKEVGSFISTGTELD 81 V E S + T + D Sbjct: 65 VVVKKIYEDKSPFRIVYDPTHPDAD 89 >gi|225181613|ref|ZP_03735054.1| flagellar basal-body rod protein FlgC [Dethiobacter alkaliphilus AHT 1] gi|225167721|gb|EEG76531.1| flagellar basal-body rod protein FlgC [Dethiobacter alkaliphilus AHT 1] Length = 136 Score = 56.8 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 23/42 (54%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N N + EM MI T+ + + T ++ ++ L+A+ Sbjct: 90 GYVAYPNVNIVQEMVDMITATRAYEANVTALNASKNMFLKAL 131 Score = 49.9 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 38/107 (35%), Gaps = 7/107 (6%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVV-GAIKNDIDQK 55 + N+ + A RL +A+N++N T G ++ F+EV+ GA K+ + Sbjct: 5 KAMNVSSSGLTAERFRLDLIANNIANAHTTRTEDGGPYQRKSAVFAEVMDGARKSGQGVR 64 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTR 102 + V+ E + + E I TR Sbjct: 65 VQGVSVDNTEPRLVYEPEHPDANEEGYVAYPNVNIVQEMVDMITATR 111 >gi|163856433|ref|YP_001630731.1| flagellar basal body rod protein FlgC [Bordetella petrii DSM 12804] gi|163260161|emb|CAP42463.1| flagellar basal-body rod protein FlgC [Bordetella petrii] Length = 139 Score = 56.8 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 6/44 (13%), Positives = 23/44 (52%) Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +G++ N + + E MI ++ + + +++ ++ M++ + Sbjct: 92 QGYVTMPNVDPVAETVNMIAASRSYQANVEVLNTAKQLMMKTLT 135 Score = 37.2 bits (84), Expect = 2.3, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 6/46 (13%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDT-VG-----FRTIKVKFS 42 + F+I +A A QR++ A N++N D+ VG +R +V F Sbjct: 5 SIFDIAGSALQAQSQRMNVSASNLANADSAVGPDGQPYRARQVVFQ 50 >gi|253573516|ref|ZP_04850859.1| flagellar basal-body rod protein FlgC [Paenibacillus sp. oral taxon 786 str. D14] gi|251847044|gb|EES75049.1| flagellar basal-body rod protein FlgC [Paenibacillus sp. oral taxon 786 str. D14] Length = 149 Score = 56.8 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 23/43 (53%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N + + EM MI T+ + + T ++ ++ +A++ Sbjct: 104 GYVYMPNVDILKEMVDMISATRSYEANVTALNASKAMFTKALQ 146 Score = 42.5 bits (98), Expect = 0.044, Method: Composition-based stats. Identities = 9/29 (31%), Positives = 16/29 (55%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTV 32 SF I +A A R+ ++ N++N +T Sbjct: 6 SFGISSSALTAQRLRMDVISSNIANAETT 34 >gi|33596138|ref|NP_883781.1| flagellar basal body rod protein FlgC [Bordetella parapertussis 12822] gi|33601539|ref|NP_889099.1| flagellar basal body rod protein FlgC [Bordetella bronchiseptica RB50] gi|33573141|emb|CAE36788.1| flagellar basal-body rod protein FlgC [Bordetella parapertussis] gi|33575975|emb|CAE33054.1| flagellar basal-body rod protein FlgC [Bordetella bronchiseptica RB50] Length = 139 Score = 56.8 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 18/136 (13%), Positives = 43/136 (31%), Gaps = 12/136 (8%) Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 VSAS +A Q + ++ G+ I + + V Sbjct: 12 SALSAQSQRMNVSASNMANADSVAGPDGQPYRARQVVFQVNPPPGQAFGQEIGGVRVAGV 71 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223 Q ++ P +G++ N + + E MI ++ + + Sbjct: 72 VEDQSPFKKIYDPKHPMAD------------AQGYVNMPNVDPVAETVNMIAASRSYQAN 119 Query: 224 TTLIDENEKSMLEAIR 239 +++ ++ ML+ + Sbjct: 120 VEVLNTAKQLMLKTLT 135 Score = 37.5 bits (85), Expect = 1.8, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFS 42 I +A A QR++ A NM+N D+V +R +V F Sbjct: 9 IAGSALSAQSQRMNVSASNMANADSVAGPDGQPYRARQVVFQ 50 >gi|220929470|ref|YP_002506379.1| flagellar basal-body rod protein FlgC [Clostridium cellulolyticum H10] gi|219999798|gb|ACL76399.1| flagellar basal-body rod protein FlgC [Clostridium cellulolyticum H10] Length = 147 Score = 56.8 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 22/42 (52%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N + + EM MI T+ + + T ++ + L+A+ Sbjct: 102 GYVNMPNVDIVTEMVNMISATRSYEANVTSVNATKSMALKAL 143 Score = 52.2 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 23/47 (48%), Gaps = 6/47 (12%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43 ++ +I + A R+ T++ N++N +T G +R V F E Sbjct: 5 SALDISASGLTAQRVRMDTISQNIANANTTRTTDGTPYRRRDVVFEE 51 >gi|39995516|ref|NP_951467.1| flagellar basal-body rod protein FlgC [Geobacter sulfurreducens PCA] gi|39982279|gb|AAR33740.1| flagellar basal-body rod protein FlgC [Geobacter sulfurreducens PCA] gi|298504516|gb|ADI83239.1| flagellar basal body rod protein FlgC [Geobacter sulfurreducens KN400] Length = 146 Score = 56.8 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 1/47 (2%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G++ N N + EM MI T+ + + T + + L+ + I S Sbjct: 100 GYVALPNVNVVEEMADMIAATRAYEANVTAMQAAKNMALKTL-EIGS 145 Score = 40.6 bits (93), Expect = 0.18, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 41/136 (30%), Gaps = 21/136 (15%) Query: 1 MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFS---------- 42 M ++ + +A A R++ ++ N++N ++ G ++ F+ Sbjct: 1 MDFFSAMQVSSSALSAERTRMNLISANLANANSTRTAEGGPYKRKDAVFAATQVGEGFRS 60 Query: 43 --EVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL 100 + + Q V + S + AL + E I Sbjct: 61 ALDRMRKNAPQGVQVTGIVEDPNPPRLQYDPSHPDADAKGYVALP-NVNVVEEMADMIAA 119 Query: 101 TRDGRFKVTDDGSLVS 116 TR VT + + Sbjct: 120 TRAYEANVTAMQAAKN 135 >gi|260222465|emb|CBA32056.1| Flagellar basal-body rod protein flgC [Curvibacter putative symbiont of Hydra magnipapillata] Length = 134 Score = 56.8 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 24/43 (55%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ SN N + EM MI ++ + + +++ + +L+ ++ Sbjct: 89 GYVTQSNVNPVEEMVNMISASRSYQNNVEVMNTAKSLLLKTLQ 131 Score = 44.5 bits (103), Expect = 0.013, Method: Composition-based stats. Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 6/82 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQ 54 M + FN+ +A A QRL+ VA N++N D V G+++ +V F V + Sbjct: 3 MFSIFNVSGSAVSAQSQRLNVVASNLANADAVAGPDGQGYKSRQVVFETVPMGSEASSGV 62 Query: 55 KISFVASGKEYLSKEVGSFIST 76 K+S + E L K + Sbjct: 63 KVSSIKESNEPLRKVHNPLHPS 84 >gi|166009026|ref|ZP_02229924.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar Antiqua str. E1979001] gi|167419248|ref|ZP_02311001.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167466339|ref|ZP_02331043.1| flagellar basal body rod protein FlgF [Yersinia pestis FV-1] gi|229840622|ref|ZP_04460781.1| Flagellar basal-body rod protein flgF [Yersinia pestis biovar Orientalis str. PEXU2] gi|229842827|ref|ZP_04462979.1| Flagellar basal-body rod protein flgF [Yersinia pestis biovar Orientalis str. India 195] gi|165992365|gb|EDR44666.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar Antiqua str. E1979001] gi|166963242|gb|EDR59263.1| flagellar basal-body rod protein FlgF [Yersinia pestis biovar Orientalis str. MG05-1020] gi|229690094|gb|EEO82151.1| Flagellar basal-body rod protein flgF [Yersinia pestis biovar Orientalis str. India 195] gi|229696988|gb|EEO87035.1| Flagellar basal-body rod protein flgF [Yersinia pestis biovar Orientalis str. PEXU2] Length = 62 Score = 56.8 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 8/37 (21%), Positives = 16/37 (43%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTI 37 M ++ + A+N++N++T GFR Sbjct: 1 MDKLLYTAVSGANRSLSQQQIHANNLANSNTQGFRAD 37 >gi|323705448|ref|ZP_08117023.1| flagellar basal-body rod protein FlgC [Thermoanaerobacterium xylanolyticum LX-11] gi|323535350|gb|EGB25126.1| flagellar basal-body rod protein FlgC [Thermoanaerobacterium xylanolyticum LX-11] Length = 149 Score = 56.8 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 22/42 (52%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N N + EM MI T+ + + T ++ + + +A+ Sbjct: 103 GYVNYPNVNIVSEMVDMISATRAYEANVTAVNSTKSMIEKAL 144 Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 8/31 (25%), Positives = 14/31 (45%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32 S +I A R+ ++ N++N DT Sbjct: 4 LNSIDISATGLTAERLRMDVISQNIANVDTT 34 >gi|146281769|ref|YP_001171922.1| flagellar basal body rod protein FlgC [Pseudomonas stutzeri A1501] gi|145569974|gb|ABP79080.1| flagellar basal-body rod protein FlgC [Pseudomonas stutzeri A1501] Length = 134 Score = 56.8 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 15/111 (13%), Positives = 34/111 (30%), Gaps = 6/111 (5%) Query: 129 VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED 188 + + G + + G V + + P P D Sbjct: 27 QTYRARHPVFATVFQQAGGQPNESLFAGQDQAGAGVQVLGVVEDQGELQARYEPNHPAAD 86 Query: 189 LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + G++ N N + EM MI ++ F + L++ + + + + Sbjct: 87 ------ESGYVYYPNVNVVEEMADMISASRAFQTNAELMNTAKTMLQKVLT 131 Score = 40.6 bits (93), Expect = 0.19, Method: Composition-based stats. Identities = 13/73 (17%), Positives = 26/73 (35%), Gaps = 6/73 (8%) Query: 12 QLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65 A RL+T++ N++N +TV +R F+ V ++ + Sbjct: 1 MSAQSTRLNTISSNIANAETVSSSVDQTYRARHPVFATVFQQAGGQPNESLFAGQDQAGA 60 Query: 66 LSKEVGSFISTGT 78 + +G G Sbjct: 61 GVQVLGVVEDQGE 73 >gi|297530608|ref|YP_003671883.1| flagellar basal-body rod protein FlgC [Geobacillus sp. C56-T3] gi|297253860|gb|ADI27306.1| flagellar basal-body rod protein FlgC [Geobacillus sp. C56-T3] Length = 150 Score = 56.8 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 9/46 (19%), Positives = 26/46 (56%), Gaps = 1/46 (2%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G++ N + + EM +I T+ + + T+++ ++ +++A+ I Sbjct: 105 GYVRLPNVDPLKEMVDLIGATRSYEANVTVLNASKGMLMKAL-EIG 149 Score = 52.2 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 33/114 (28%), Gaps = 17/114 (14%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV------G----FRTIKV-------KFSEVV 45 S NI +A A R+ +A N++N DT G +R V FS + Sbjct: 5 QSLNISASALTAQRLRMDVIASNIANVDTTRARLVNGEWEPYRRKMVIIEPQSGSFSGYL 64 Query: 46 GAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 A D V + + D +G P + Sbjct: 65 QAALGRADAVDGGVRVREIVDDPAPFKLVYDPNHPDAGADGYVRLPNVDPLKEM 118 >gi|332531616|ref|ZP_08407513.1| flagellar basal-body rod protein FlgC [Hylemonella gracilis ATCC 19624] gi|332038979|gb|EGI75408.1| flagellar basal-body rod protein FlgC [Hylemonella gracilis ATCC 19624] Length = 136 Score = 56.8 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 24/43 (55%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ SN N + EM MI ++ + + +++ + +L+ ++ Sbjct: 91 GYVNQSNVNPVEEMVNMISASRSYQNNVEVMNTAKTLLLKTLQ 133 Score = 40.2 bits (92), Expect = 0.24, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 29/82 (35%), Gaps = 6/82 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQ 54 M + F + +A A QRL+ VA N++N D V ++ +V F + Sbjct: 3 MFSIFGVSGSAISAQAQRLNVVASNLANADAVAGPDGQFYKARQVVFETLPFDEATPGAA 62 Query: 55 KISFVASGKEYLSKEVGSFIST 76 + A + + Sbjct: 63 GVKINAVTESQAPARRTYEPTH 84 >gi|251789166|ref|YP_003003887.1| flagellar basal body rod protein FlgC [Dickeya zeae Ech1591] gi|271500064|ref|YP_003333089.1| flagellar basal-body rod protein FlgC [Dickeya dadantii Ech586] gi|307131611|ref|YP_003883627.1| flagellar basal-body rod protein flgC [Dickeya dadantii 3937] gi|247537787|gb|ACT06408.1| flagellar basal-body rod protein FlgC [Dickeya zeae Ech1591] gi|270343619|gb|ACZ76384.1| flagellar basal-body rod protein FlgC [Dickeya dadantii Ech586] gi|306529140|gb|ADM99070.1| Flagellar basal-body rod protein flgC [Dickeya dadantii 3937] Length = 134 Score = 56.8 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N + + EM I ++ + + +++ + ML+ + Sbjct: 89 GYVRMPNVDPVNEMVNTISASRSYQANVEVLNTTKSMMLKTLT 131 Score = 39.1 bits (89), Expect = 0.61, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 6/47 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42 F+I +A A QRL+ A N++N G +R +V F Sbjct: 4 LNIFDISGSALSAQSQRLNVSASNLANADSVTGPDGQPYRAKQVVFE 50 >gi|304316910|ref|YP_003852055.1| flagellar basal-body rod protein FlgC [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778412|gb|ADL68971.1| flagellar basal-body rod protein FlgC [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 149 Score = 56.4 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 22/42 (52%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N N + EM MI T+ + + T ++ + + +A+ Sbjct: 103 GYVNYPNVNIVSEMVDMISATRAYEANVTAVNSAKSMIEKAL 144 Score = 45.6 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 8/31 (25%), Positives = 14/31 (45%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32 S +I A R+ ++ N++N DT Sbjct: 4 LNSIDISATGLTAERLRMDVISQNIANVDTT 34 >gi|326204628|ref|ZP_08194484.1| flagellar basal-body rod protein FlgC [Clostridium papyrosolvens DSM 2782] gi|325985195|gb|EGD46035.1| flagellar basal-body rod protein FlgC [Clostridium papyrosolvens DSM 2782] Length = 147 Score = 56.4 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 22/42 (52%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N + + EM MI T+ + + T ++ + L+A+ Sbjct: 102 GYVNMPNVDIVTEMVNMISATRSYEANVTSVNATKSMALKAL 143 Score = 51.8 bits (122), Expect = 8e-05, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 24/47 (51%), Gaps = 6/47 (12%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43 ++ +I + A R+ T++ N++N +T G +R +V F E Sbjct: 5 SALDISASGLTAQRVRMDTISQNIANANTTRTADGTPYRRREVVFEE 51 >gi|94266018|ref|ZP_01289739.1| conserved hypothetical protein [delta proteobacterium MLMS-1] gi|94270422|ref|ZP_01291737.1| conserved hypothetical protein [delta proteobacterium MLMS-1] gi|93450809|gb|EAT01850.1| conserved hypothetical protein [delta proteobacterium MLMS-1] gi|93453413|gb|EAT03835.1| conserved hypothetical protein [delta proteobacterium MLMS-1] Length = 118 Score = 56.4 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 7/41 (17%), Positives = 18/41 (43%) Query: 199 LEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +E SN + EM M+ + F + ++ ++ + + Sbjct: 75 VEKSNVDLAEEMPNMMLSRRYFQANLKVVQTEDERLGNLLN 115 Score = 55.3 bits (131), Expect = 6e-06, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 33/83 (39%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M L+ AL+Q+ S A N++N +T G++ +KV +E + + Sbjct: 1 MVGGIQAALSGLQALQQKNSATAHNVANVNTDGYKKVKVSLAETTPPGGVEARAEKIDTP 60 Query: 61 SGKEYLSKEVGSFISTGTELDFA 83 + G + + +D A Sbjct: 61 GPQVSEQTADGPELVEKSNVDLA 83 >gi|226939376|ref|YP_002794449.1| FlgC1 [Laribacter hongkongensis HLHK9] gi|226714302|gb|ACO73440.1| FlgC1 [Laribacter hongkongensis HLHK9] Length = 137 Score = 56.4 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 22/43 (51%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N + EM MI ++ + + +++ ++ + + + Sbjct: 91 GYVTMPNINPVEEMTDMISASRAYQTNVEMMNTTKQLLQKTLS 133 Score = 40.6 bits (93), Expect = 0.19, Method: Composition-based stats. Identities = 14/81 (17%), Positives = 34/81 (41%), Gaps = 6/81 (7%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTD----TVG--FRTIKVKFSEVVGAIKNDIDQK 55 +I +A A +RL+ VA N++N D + G ++ ++ F+ + + K Sbjct: 4 NRVLDIAGSALTAQSKRLNVVASNIANVDSAVASNGEPYKARRIVFTPIPVSPAEPKVAK 63 Query: 56 ISFVASGKEYLSKEVGSFIST 76 ++ A ++ + + Sbjct: 64 VAVTAIVEDQSPPRMNYNPAH 84 >gi|251797447|ref|YP_003012178.1| flagellar basal-body rod protein FlgC [Paenibacillus sp. JDR-2] gi|247545073|gb|ACT02092.1| flagellar basal-body rod protein FlgC [Paenibacillus sp. JDR-2] Length = 151 Score = 56.4 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 21/42 (50%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N + EM MI ++ + + T ++ ++ +A+ Sbjct: 106 GYVHMPNVDVAKEMVDMISASRSYEANVTALNASKAMFTKAL 147 Score = 36.4 bits (82), Expect = 3.4, Method: Composition-based stats. Identities = 5/21 (23%), Positives = 11/21 (52%) Query: 12 QLALEQRLSTVADNMSNTDTV 32 A R+ ++ N++N +T Sbjct: 14 LTAQRLRMDVISSNIANAETT 34 >gi|54307275|ref|YP_128295.1| flagellar hook-associated protein [Photobacterium profundum SS9] gi|46911695|emb|CAG18493.1| Hypothetical flagellar hook-associated protein [Photobacterium profundum SS9] Length = 468 Score = 56.4 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 29/80 (36%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + NIGL+ A LS + N++N T GF +V F V A +S V Sbjct: 1 MSLINIGLSGLNAANAGLSVTSHNIANAMTPGFSRQRVGFGAQVSAGSQGAGVGVSSVER 60 Query: 62 GKEYLSKEVGSFISTGTELD 81 + + + + Sbjct: 61 MADNYLNQQIYKQNGSWGFN 80 Score = 35.6 bits (80), Expect = 6.7, Method: Composition-based stats. Identities = 13/123 (10%), Positives = 33/123 (26%), Gaps = 3/123 (2%) Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178 G+ + I + + + + +A ++ G+ Sbjct: 342 GEPGNSENLQQLIDLKNAPVSIDQTKLSIEDAETYQVAIAKFEGKSLNNGYTGLTGDWAI 401 Query: 179 PNIPPTPLEDLSGVTVKRGFLED---SNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 + S V + E S N E ++ TQ + + +I ++ Sbjct: 402 KTAQIEADTEASKALVGQAQGERDSISGVNLDEEAASIMTYTQMYQANAKVISTAQQLFD 461 Query: 236 EAI 238 + Sbjct: 462 VTL 464 >gi|33592477|ref|NP_880121.1| flagellar basal body rod protein FlgC [Bordetella pertussis Tohama I] gi|33572123|emb|CAE41665.1| flagellar basal-body rod protein FlgC [Bordetella pertussis Tohama I] gi|332381894|gb|AEE66741.1| flagellar basal body rod protein FlgC [Bordetella pertussis CS] Length = 139 Score = 56.4 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 10/87 (11%), Positives = 31/87 (35%) Query: 153 KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQ 212 + + G VR + + + +G++ N + + E Sbjct: 49 FQVNPPAGQAFGQEIGGVRVAGVVEDQSPFKKIYDPKHPMADAQGYVNMPNVDPVAETVN 108 Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIR 239 MI ++ + + +++ ++ ML+ + Sbjct: 109 MIAASRSYQANVEVLNTAKQLMLKTLT 135 Score = 37.2 bits (84), Expect = 2.3, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFS 42 I +A A QR++ A NM+N D+V +R +V F Sbjct: 9 IAGSALSAQSQRMNVSASNMANADSVAGPDGQPYRARQVVFQ 50 >gi|319649569|ref|ZP_08003725.1| flagellar basal-body rod protein C [Bacillus sp. 2_A_57_CT2] gi|317398731|gb|EFV79413.1| flagellar basal-body rod protein C [Bacillus sp. 2_A_57_CT2] Length = 150 Score = 56.4 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 25/42 (59%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++E N + + EM +I T+ + + T+ + ++ M++A+ Sbjct: 105 GYVEMPNVDPLREMTDLISATRSYEANVTVFNASKGMMMKAL 146 Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 10/32 (31%), Positives = 16/32 (50%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32 M S N +A A R+ ++ NM+N D+ Sbjct: 3 MFHSMNNTASALTAQRLRMDVISSNMANADST 34 >gi|302037602|ref|YP_003797924.1| flagellar basal-body rod protein FlgC [Candidatus Nitrospira defluvii] gi|300605666|emb|CBK41999.1| Flagellar basal-body rod protein FlgC [Candidatus Nitrospira defluvii] Length = 149 Score = 56.4 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 1/46 (2%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 GF+ N N M EM MI ++ + + I+ A+ I Sbjct: 104 GFVTMPNVNVMEEMVNMIGASRAYEANVQAINATRTMWNRAL-EIG 148 Score = 42.9 bits (99), Expect = 0.038, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 6/46 (13%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNT-----DTVG-FRTIKVKFSE 43 S + ++A A RL+ +A N++N T G +R V F Sbjct: 6 SLAVSVSALDAHRHRLNVIASNLANAQSTKTSTGGPYRRRDVVFQA 51 >gi|239817167|ref|YP_002946077.1| flagellar basal-body rod protein FlgC [Variovorax paradoxus S110] gi|239803744|gb|ACS20811.1| flagellar basal-body rod protein FlgC [Variovorax paradoxus S110] Length = 138 Score = 56.4 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 22/43 (51%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N + EM MI ++ + + +++ + M++ + Sbjct: 93 GYVAMPNVNVVEEMTNMISASRSYQANVEVLNTAKTLMVKTLS 135 Score = 43.3 bits (100), Expect = 0.026, Method: Composition-based stats. Identities = 19/121 (15%), Positives = 40/121 (33%), Gaps = 6/121 (4%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQK 55 F++ +A A QR++ A N++N ++V +R +V F ++ K Sbjct: 8 MNIFSVAGSAMAAQSQRMNVTASNLANAESVAGPDGKPYRAKQVVFEVDASGQQDIGGVK 67 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115 ++ V L + + E I +R + V + Sbjct: 68 VAGVIEDPSPLKMVFDPKNPHADAKGYVAMPNVNVVEEMTNMISASRSYQANVEVLNTAK 127 Query: 116 S 116 + Sbjct: 128 T 128 >gi|149927796|ref|ZP_01916047.1| flagellar basal-body rod protein FlgC [Limnobacter sp. MED105] gi|149823418|gb|EDM82649.1| flagellar basal-body rod protein FlgC [Limnobacter sp. MED105] Length = 140 Score = 56.4 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 24/43 (55%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N++ EM M+ ++ + + +++ ++ ML+ + Sbjct: 94 GYVYMPNVNAVEEMVDMLAASRSYQTNAEVMNTAKQLMLKTLN 136 Score = 39.1 bits (89), Expect = 0.55, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 27/80 (33%), Gaps = 6/80 (7%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56 SF + A A RL+TVA N++N DT ++ KV F V+ Sbjct: 5 NSFKLAGGAMQAQTTRLNTVASNLANVDTAAGDPNSVYQARKVVFEAVLQKAAPGKASLA 64 Query: 57 SFVASGKEYLSKEVGSFIST 76 V K + Sbjct: 65 ENVQVKDIVEDKTEAKKMFD 84 >gi|238028851|ref|YP_002913082.1| flagellar basal body rod protein FlgC [Burkholderia glumae BGR1] gi|237878045|gb|ACR30378.1| Flagellar basal-body rod protein FlgC [Burkholderia glumae BGR1] Length = 141 Score = 56.4 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 12/94 (12%), Positives = 35/94 (37%), Gaps = 12/94 (12%) Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNAN 205 G ++ G+ + + + V ++ +P G++ N + Sbjct: 57 GARTRSGQGVGGVQVKQVIDDPSPMKTSYDPSNPTADAN------------GYVTLPNVD 104 Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + EM MI ++ + + ++ ++ ML+ + Sbjct: 105 PVQEMVNMISASRSYQANVETLNTAKQLMLKTLT 138 Score = 41.0 bits (94), Expect = 0.14, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 27/88 (30%), Gaps = 6/88 (6%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSEVVGAIKNDIDQK 55 F++ +A A QRL+ A N++N G +R +V F + Sbjct: 5 MNIFDVAGSAMSAESQRLNVTASNLANADSVTGPDGKPYRAKQVVFETQPLGGARTRSGQ 64 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFA 83 K+ + S A Sbjct: 65 GVGGVQVKQVIDDPSPMKTSYDPSNPTA 92 >gi|186477695|ref|YP_001859165.1| flagellar basal body rod protein FlgC [Burkholderia phymatum STM815] gi|184194154|gb|ACC72119.1| flagellar basal-body rod protein FlgC [Burkholderia phymatum STM815] Length = 141 Score = 56.4 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 11/61 (18%), Positives = 27/61 (44%) Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 P T E + G+++ N + + EM MI ++ + + ++ ++ ML+ + Sbjct: 78 PTPMKTSYEPGNPAADANGYVQLPNVDPVQEMVNMISASRSYQANVETLNTAKQLMLKTL 137 Query: 239 R 239 Sbjct: 138 T 138 Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 33/105 (31%), Gaps = 7/105 (6%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS-EVVGAIKNDIDQ 54 FN+ +A A QRL+ A N++N T G ++ +V F+ +G + Q Sbjct: 5 MNIFNVAGSAMSAQSQRLNVTASNLANADSTTGPDGKPYKAKQVVFAVNPIGGARTGSGQ 64 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 ++ V G P + Sbjct: 65 QVGGVQVTGVIDDPTPMKTSYEPGNPAADANGYVQLPNVDPVQEM 109 >gi|149189842|ref|ZP_01868122.1| putative flagellar hook-associated protein [Vibrio shilonii AK1] gi|148836328|gb|EDL53285.1| putative flagellar hook-associated protein [Vibrio shilonii AK1] Length = 457 Score = 56.4 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 31/99 (31%), Gaps = 1/99 (1%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 NI L+ A L A N++N +T G+ + + + G + + V Sbjct: 1 MNLVNIALSGMNANRVALDVTAQNVANINTPGYSRQQAVMASLAGGKYDKTNP-GMGVEV 59 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL 100 + T + A + + S +L Sbjct: 60 TSIRRVTDQYLVKQTWSTASAANYASGYTSAMSQLENML 98 >gi|253682065|ref|ZP_04862862.1| flagellar basal-body rod protein FlgC [Clostridium botulinum D str. 1873] gi|253561777|gb|EES91229.1| flagellar basal-body rod protein FlgC [Clostridium botulinum D str. 1873] Length = 145 Score = 56.4 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G++ N N + EM MI T+ + + T I+ ++ ++A+ I Sbjct: 100 GYVLMPNVNILNEMADMIAATRAYEANVTAINSSKSMFMKAL-EIG 144 Score = 39.9 bits (91), Expect = 0.33, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 20/49 (40%), Gaps = 8/49 (16%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV-G-------FRTIKVKFSE 43 +S I + A R+ T++ N++N T G +R F E Sbjct: 5 SSLRISASGLSAERLRMDTISSNITNFKTTRGKDGNKEPYRRKIAVFQE 53 >gi|168698712|ref|ZP_02730989.1| Flagellar basal body rod protein [Gemmata obscuriglobus UQM 2246] Length = 144 Score = 56.4 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 6/53 (11%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDID 53 I A R+ +A+N++N +T G +R V F E++GA Sbjct: 12 ISGTGMSAERLRMEVIANNIANANTTRSANGGPYRRQDVVFEELLGAAAGPFG 64 Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 8/47 (17%), Positives = 18/47 (38%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 GF+ N EM ++ T+ + + + +A+ + S Sbjct: 98 GFVRMPNVQLPIEMVNLLTATRAYEANLRAAQTFRQMNEQALVLLRS 144 >gi|71282480|ref|YP_268228.1| flagellar hook-associated protein [Colwellia psychrerythraea 34H] gi|71148220|gb|AAZ28693.1| flagellar hook-associated protein [Colwellia psychrerythraea 34H] Length = 665 Score = 56.4 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 32/229 (13%), Positives = 63/229 (27%), Gaps = 17/229 (7%) Query: 1 MQTSFN-IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFV 59 M S G++ LA +Q+L+T N+SN +T G+ + + + VG + Sbjct: 1 MSVSLYQSGMSGLLAAQQQLATTGHNISNVNTDGYNRQRAEQNATVGLNNGNNYIGGGTY 60 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF--KVTDDGSLVSA 117 L + + L ++ T + ++ Sbjct: 61 IQDITRLYDQFSHKEQITNQSKLGNADSLHARLTQLDQVMSTSGNAVVGSLDQFYQALNG 120 Query: 118 SGKYPVLDM-----ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172 P + + I + ++SQ + Sbjct: 121 VADNPNDSGLRSIVLNQANTLSNDFNQLTNNLDQMTKSINGEIEQVASKISEISQELAKI 180 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSN---ANSMYE----MGQMI 214 + + P + L G E SN N++ + M MI Sbjct: 181 NETIMHSQQGGQPNDLLDKRDQLIG--ELSNYTQVNTVKDANNVMTVMI 227 >gi|295690745|ref|YP_003594438.1| flagellar hook-associated protein FlgK [Caulobacter segnis ATCC 21756] gi|295432648|gb|ADG11820.1| flagellar hook-associated protein FlgK [Caulobacter segnis ATCC 21756] Length = 703 Score = 56.4 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 24/223 (10%), Positives = 65/223 (29%), Gaps = 20/223 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + + + A + L +DN++N +T G+ + S ++ I I + Sbjct: 4 NSIMSTATSGMTAAQTGLRVTSDNIANVNTNGYVRKTISQSNMLS-NGMGIGVSIDAIKR 62 Query: 62 GKEYLSKEVGSFISTGTELDFALEG-----DAWFALESPRGIILTRDGRFKVTDDGSLVS 116 + ++ + + F + TR + + Sbjct: 63 ATDRFLTTASLNAASDSSRATVIAQSLNNVQQLFGDPTGSTSFFTRLD----DVFTAFSA 118 Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN-- 174 A + + + + + IS+ GK + T VD + + + Sbjct: 119 AQDDPSSALLRTQALTRVDQFLSESSRITSSISKLGKDVDTRISGDVDRVNDLLSQIDAL 178 Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217 + + V+ G + E+ +++++ Sbjct: 179 NTDITRAKVAGTDATGAENVQSG--------LVDELSKLMNVQ 213 Score = 35.6 bits (80), Expect = 5.9, Method: Composition-based stats. Identities = 7/30 (23%), Positives = 11/30 (36%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 N E+ + Q FN+ LI + Sbjct: 665 VNLDEELINLTTYQQAFNASARLIQAAKDM 694 >gi|15615023|ref|NP_243326.1| flagellar basal body rod protein FlgC [Bacillus halodurans C-125] gi|10175080|dbj|BAB06179.1| flagellar basal-body rod protein [Bacillus halodurans C-125] Length = 152 Score = 56.4 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 25/42 (59%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++E N + + EM ++ T+ + + T ++ ++ +++A+ Sbjct: 107 GYVEMPNVDPLREMVDLMSATRSYEANVTTLNASKNILMKAL 148 Score = 39.1 bits (89), Expect = 0.50, Method: Composition-based stats. Identities = 8/29 (27%), Positives = 15/29 (51%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTV 32 NI +A + R+ ++ NM+N +T Sbjct: 6 GMNISGSALTSQRLRMDVISANMANAETT 34 >gi|167568105|ref|ZP_02361021.1| flagellar basal body rod protein FlgC [Burkholderia oklahomensis EO147] gi|167574223|ref|ZP_02367097.1| flagellar basal body rod protein FlgC [Burkholderia oklahomensis C6786] Length = 141 Score = 56.4 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 8/45 (17%), Positives = 23/45 (51%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + G++ N + + EM MI ++ + + ++ ++ ML+ + Sbjct: 94 QNGYVTMPNVDPVQEMVNMISASRSYQANVETLNTAKQLMLKTLT 138 Score = 43.3 bits (100), Expect = 0.033, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 34/99 (34%), Gaps = 7/99 (7%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSEVVGAIKNDIDQK 55 F++ +A A QRL+ A N++N G ++ +V F+ + Sbjct: 5 MNIFDVAGSAMSAQSQRLNVTASNLANADSVTGPDGKPYKAKQVVFATAPMGRARTASGQ 64 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES 94 + + + + + A + + + + + Sbjct: 65 GVGGVQVTKVID-DPSPMKTAYDPSNPAADQNGYVTMPN 102 >gi|330946986|gb|EGH47794.1| flagellar hook protein FlgE [Pseudomonas syringae pv. pisi str. 1704B] Length = 80 Score = 56.4 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 9/55 (16%), Positives = 19/55 (34%) Query: 185 PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + + + LE+SN + E+ +I + + I M I+ Sbjct: 24 APQSGTLGYITGQALEESNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQTTIQ 78 >gi|225849147|ref|YP_002729311.1| flagellar basal-body rod protein FlgC [Sulfurihydrogenibium azorense Az-Fu1] gi|225643183|gb|ACN98233.1| flagellar basal-body rod protein FlgC [Sulfurihydrogenibium azorense Az-Fu1] Length = 137 Score = 56.4 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 8/48 (16%), Positives = 24/48 (50%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 + G++ N + + EM M+ + + + T + ++ +L+++ I Sbjct: 89 QNGYVRLPNVDPIREMVDMMSAMRSYEANLTAFNTHKDMILKSLEIIR 136 Score = 43.7 bits (101), Expect = 0.024, Method: Composition-based stats. Identities = 14/88 (15%), Positives = 28/88 (31%), Gaps = 7/88 (7%) Query: 1 MQ-TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDID 53 M + ++ A R+ A N++N ++ G +R F V+ + + Sbjct: 1 MIFKGLEVSVSGMQAERVRIDLSASNLANVNSTRAEDGQPYRRKVPVFEAVLDSQSKNTP 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELD 81 V + S F + D Sbjct: 61 IYKVRVKEIQTDPSPFKLKFDPNNPDAD 88 >gi|167469720|ref|ZP_02334424.1| flagellar hook protein FlgE [Yersinia pestis FV-1] Length = 73 Score = 56.0 bits (133), Expect = 4e-06, Method: Composition-based stats. Identities = 11/58 (18%), Positives = 28/58 (48%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 F+ ++ A L + +N++N+ T GF+ V F+++ + + K++ + Sbjct: 2 GFSQAVSGMNAASSNLDVIGNNIANSATSGFKAGSVSFADMFAGSQTGMGVKVAGITQ 59 >gi|218886418|ref|YP_002435739.1| hypothetical protein DvMF_1322 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218757372|gb|ACL08271.1| protein of unknown function DUF1078 domain protein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 136 Score = 56.0 bits (133), Expect = 4e-06, Method: Composition-based stats. Identities = 16/132 (12%), Positives = 36/132 (27%) Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 G+ +SA + + + F + + G Sbjct: 3 DGFGTPLSALDAFGTSMAVTANNVANMNTDEFRASDVRLQTGPASQDGQDGQERGVQVAE 62 Query: 169 FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228 + G + VTV+ +E SN + EM M+ + F + ++ Sbjct: 63 IRQSTTEGPLRMDLRRVVHADGSVTVETSAIEGSNTDVANEMVSMLTDQRAFEANAAVVR 122 Query: 229 ENEKSMLEAIRN 240 ++ + Sbjct: 123 ARDEMTGILVDR 134 Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 28/82 (34%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M F L+A A ++ A+N++N +T FR V+ + Q+ Sbjct: 1 MIDGFGTPLSALDAFGTSMAVTANNVANMNTDEFRASDVRLQTGPASQDGQDGQERGVQV 60 Query: 61 SGKEYLSKEVGSFISTGTELDF 82 + + E + + Sbjct: 61 AEIRQSTTEGPLRMDLRRVVHA 82 >gi|296186751|ref|ZP_06855153.1| flagellar hook-associated protein FlgK [Clostridium carboxidivorans P7] gi|296048788|gb|EFG88220.1| flagellar hook-associated protein FlgK [Clostridium carboxidivorans P7] Length = 463 Score = 56.0 bits (133), Expect = 4e-06, Method: Composition-based stats. Identities = 11/88 (12%), Positives = 33/88 (37%), Gaps = 4/88 (4%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV----VGAIKNDIDQKISFVA 60 NI + A ++ + + N++N +T G+ + + + ++ N + Sbjct: 8 LNISKSGMFAQQRCIDVTSHNIANANTDGYSRQRAELQTTKPFPMPSVNNAVGPGQLGTG 67 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDA 88 + + SF+ ++ ++G Sbjct: 68 VEVTTIDRIRDSFLDYQIRVEKGVDGQY 95 >gi|147678427|ref|YP_001212642.1| flagellar basal body protein [Pelotomaculum thermopropionicum SI] gi|146274524|dbj|BAF60273.1| flagellar basal body protein [Pelotomaculum thermopropionicum SI] Length = 133 Score = 56.0 bits (133), Expect = 4e-06, Method: Composition-based stats. Identities = 12/55 (21%), Positives = 20/55 (36%), Gaps = 6/55 (10%) Query: 5 FNIGLA------AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 GL A R +A+N++N +T GF+ V+F + Sbjct: 1 MFSGLTMQALKKGLDAAALRHRVIANNIANANTPGFKKSAVEFESLFKEALGRNP 55 >gi|255523748|ref|ZP_05390714.1| flagellar hook-associated protein FlgK [Clostridium carboxidivorans P7] gi|255512617|gb|EET88891.1| flagellar hook-associated protein FlgK [Clostridium carboxidivorans P7] Length = 649 Score = 56.0 bits (133), Expect = 4e-06, Method: Composition-based stats. Identities = 11/88 (12%), Positives = 33/88 (37%), Gaps = 4/88 (4%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV----VGAIKNDIDQKISFVA 60 NI + A ++ + + N++N +T G+ + + + ++ N + Sbjct: 8 LNISKSGMFAQQRCIDVTSHNIANANTDGYSRQRAELQTTKPFPMPSVNNAVGPGQLGTG 67 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDA 88 + + SF+ ++ ++G Sbjct: 68 VEVTTIDRIRDSFLDYQIRVEKGVDGQY 95 Score = 44.1 bits (102), Expect = 0.018, Method: Composition-based stats. Identities = 6/40 (15%), Positives = 15/40 (37%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 S + EM ++ + + LI ++ + I + Sbjct: 608 SGVSLDEEMANLVQFQHCYQANAKLISTVDQLLDVVINGL 647 >gi|83646774|ref|YP_435209.1| flagellar hook protein FlgE [Hahella chejuensis KCTC 2396] gi|83634817|gb|ABC30784.1| Flagellar hook protein FlgE [Hahella chejuensis KCTC 2396] Length = 660 Score = 56.0 bits (133), Expect = 4e-06, Method: Composition-based stats. Identities = 10/90 (11%), Positives = 29/90 (32%), Gaps = 4/90 (4%) Query: 157 TMGLYSVDMSQGFVRRENS----GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQ 212 + + + S G I VK +E SN E + Sbjct: 569 QVAMANFLNVNALTSEGGSLFSAGEDAGITVGAANSGGFGKVKGESIELSNVELSREFAE 628 Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 +I + + + + + +++ + + + ++ Sbjct: 629 IIIIQRGYQASSQVMNVSNEMIENLYNSVR 658 Score = 55.6 bits (132), Expect = 5e-06, Method: Composition-based stats. Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 1/92 (1%) Query: 30 DTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAW 89 +T GF+ V F E+ + V + G +TG D A++G + Sbjct: 31 NTPGFKGRDVFFQEL-NPYSDGQGSHYDGVKVNGSGIRFSAGDLTTTGNNTDLAIDGAGF 89 Query: 90 FALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 F L + TR G+F++ +DG LV + Sbjct: 90 FILRGEGENLYTRAGQFRLDNDGYLVDQNSNR 121 >gi|315281336|ref|ZP_07869982.1| flagellar basal body rod protein FlgG [Listeria marthii FSL S4-120] gi|313615012|gb|EFR88510.1| flagellar basal body rod protein FlgG [Listeria marthii FSL S4-120] Length = 152 Score = 56.0 bits (133), Expect = 4e-06, Method: Composition-based stats. Identities = 24/144 (16%), Positives = 50/144 (34%), Gaps = 2/144 (1%) Query: 95 PRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV 154 R I L+R G+F G L +A G + + ++ + Sbjct: 1 DREISLSRGGQFHSDQFGFLRTADGANLLSATGEAIQVGQKTSIRAEANGDLYNAETNQY 60 Query: 155 IATMGLYSVDMSQG--FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQ 212 + +G V +Q V+ + N T ++ G +E SN + EM Q Sbjct: 61 LGRLGTKFVSANQADSLVKDGEGRLHVNGVNTMNLPAGQGIIQNGVIETSNVDLGVEMVQ 120 Query: 213 MIHLTQKFNSITTLIDENEKSMLE 236 ++ + + +++ +K + Sbjct: 121 LMDNQRMVQASKNVVNMFDKVYDK 144 >gi|300722684|ref|YP_003711974.1| flagellar basal-body rod cell-proximal protein [Xenorhabdus nematophila ATCC 19061] gi|297629191|emb|CBJ89787.1| flagellar biosynthesis; cell-proximal portion of basal-body rod [Xenorhabdus nematophila ATCC 19061] Length = 134 Score = 56.0 bits (133), Expect = 4e-06, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N + + EM I ++ + + +++ + ML+ + Sbjct: 89 GYVRMPNVDVVGEMVNTISASRSYQANVEVLNTTKSIMLKTLT 131 Score = 39.1 bits (89), Expect = 0.58, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 6/47 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42 + F+I +A A QRL+ A NM+N VG +R +V F Sbjct: 4 LSIFDIASSALSAQSQRLNVSASNMANADSVVGPDGEPYRAKQVVFR 50 >gi|206890290|ref|YP_002248113.1| flagellar basal-body rod protein FlgC [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742228|gb|ACI21285.1| flagellar basal-body rod protein FlgC [Thermodesulfovibrio yellowstonii DSM 11347] Length = 135 Score = 56.0 bits (133), Expect = 4e-06, Method: Composition-based stats. Identities = 22/125 (17%), Positives = 41/125 (32%), Gaps = 3/125 (2%) Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRE 173 VSA+G +V E G +K + T + R Sbjct: 9 KVSATGLEAQKIRLNVIASNLANINSTKTPEGGPYRRKDVLFTTYMYDQISQGVDVQRIV 68 Query: 174 NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 I P + K G+++ N N M EM +I ++ + + T+I+ + Sbjct: 69 EDQRPFRIVYEPSHPDAD---KNGYVKYPNVNPMEEMINLISASRAYEANLTMINSYKDM 125 Query: 234 MLEAI 238 + + Sbjct: 126 FMRTL 130 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 12/88 (13%), Positives = 26/88 (29%), Gaps = 6/88 (6%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDIDQKISF 58 + A + RL+ +A N++N ++ G +R V F+ + + Sbjct: 8 LKVSATGLEAQKIRLNVIASNLANINSTKTPEGGPYRRKDVLFTTYMYDQISQGVDVQRI 67 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEG 86 V + + S Sbjct: 68 VEDQRPFRIVYEPSHPDADKNGYVKYPN 95 >gi|288553067|ref|YP_003425002.1| flagellar basal body rod protein FlgC [Bacillus pseudofirmus OF4] gi|288544227|gb|ADC48110.1| flagellar basal body rod protein FlgC [Bacillus pseudofirmus OF4] Length = 151 Score = 56.0 bits (133), Expect = 4e-06, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 24/42 (57%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++E N + + EM ++ T+ + + T ++ + +++A+ Sbjct: 106 GYVEMPNVDPLREMVDLMTATRSYEANVTSLNATKNMLMKAL 147 Score = 40.2 bits (92), Expect = 0.22, Method: Composition-based stats. Identities = 8/30 (26%), Positives = 15/30 (50%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV 32 + FN +A R+ ++ NM+N +T Sbjct: 5 SGFNASASALTTQRLRMDVISSNMANAETT 34 >gi|2494522|sp|P70911|FLGC_BORHE RecName: Full=Flagellar basal-body rod protein flgC gi|1621621|gb|AAB51474.1| flagellar rod protein FLgC [Borrelia hermsii] Length = 59 Score = 56.0 bits (133), Expect = 4e-06, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 6/46 (13%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFS 42 +S N A RL +A+N++N +T +R +V F+ Sbjct: 5 SSINTASTGLTAQRLRLDVIANNIANVETTRTSEGGSYRRQRVIFA 50 >gi|311105933|ref|YP_003978786.1| flagellar basal-body rod protein FlgC [Achromobacter xylosoxidans A8] gi|310760622|gb|ADP16071.1| flagellar basal-body rod protein FlgC [Achromobacter xylosoxidans A8] Length = 139 Score = 56.0 bits (133), Expect = 4e-06, Method: Composition-based stats. Identities = 6/45 (13%), Positives = 21/45 (46%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +G++ N + + E MI ++ + + +++ + M + + Sbjct: 91 AQGYVSMPNVDPVAETVNMIAASRSYQANVEVLNTAKALMQKTLT 135 Score = 37.5 bits (85), Expect = 1.7, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 6/47 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42 + F+I +A A QR++ A NM+N VG +R +V F Sbjct: 4 LSIFDIAGSALSAQSQRMNVAASNMANADSVVGPDGKPYRARQVVFQ 50 >gi|330839540|ref|YP_004414120.1| flagellar basal-body rod protein FlgB [Selenomonas sputigena ATCC 35185] gi|329747304|gb|AEC00661.1| flagellar basal-body rod protein FlgB [Selenomonas sputigena ATCC 35185] Length = 137 Score = 56.0 bits (133), Expect = 4e-06, Method: Composition-based stats. Identities = 8/45 (17%), Positives = 20/45 (44%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46 + ++ A R ++ N++N +T F+ V F +++ Sbjct: 8 NRALDVMQRGMGAANLRQEVISHNIANVNTPNFKKSNVVFEDLLA 52 >gi|188997545|ref|YP_001931796.1| flagellar basal-body rod protein FlgC [Sulfurihydrogenibium sp. YO3AOP1] gi|188932612|gb|ACD67242.1| flagellar basal-body rod protein FlgC [Sulfurihydrogenibium sp. YO3AOP1] Length = 136 Score = 56.0 bits (133), Expect = 4e-06, Method: Composition-based stats. Identities = 7/46 (15%), Positives = 23/46 (50%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G++ N + + EM M+ + + + T + ++ +++++ I Sbjct: 90 GYVRLPNVDPIREMVDMMTAMRTYEANLTAFNTHKDMLIKSLEIIR 135 Score = 43.3 bits (100), Expect = 0.026, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 20/53 (37%), Gaps = 6/53 (11%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIK 49 I ++ A R+ A N++N ++ G +R F V+ A Sbjct: 4 KGLEISVSGMQAERVRIDLAASNLANVNSTHTENGQPYRRKVPVFEAVLDAQS 56 >gi|134300250|ref|YP_001113746.1| flagellar basal-body rod protein FlgB [Desulfotomaculum reducens MI-1] gi|134052950|gb|ABO50921.1| flagellar basal-body rod protein FlgB [Desulfotomaculum reducens MI-1] Length = 132 Score = 56.0 bits (133), Expect = 4e-06, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 21/50 (42%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 A R +A+N++N +T GF+ V F + + A + + Sbjct: 15 GLDAGAARQRVIANNIANFNTPGFKKSYVSFEDQLKAALGNSGVSLKGTH 64 >gi|114762160|ref|ZP_01441628.1| flagellar basal-body rod protein FlgC [Pelagibaca bermudensis HTCC2601] gi|114545184|gb|EAU48187.1| flagellar basal-body rod protein FlgC [Roseovarius sp. HTCC2601] Length = 130 Score = 56.0 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 11/39 (28%), Positives = 21/39 (53%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS 42 + ++ + A RL V++N++N DT G+R + F Sbjct: 7 ALSVSSSGLRAQADRLRVVSENIANVDTPGYRRKTLPFE 45 Score = 40.6 bits (93), Expect = 0.21, Method: Composition-based stats. Identities = 4/37 (10%), Positives = 16/37 (43%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 GF + +N + + E+ + + + + ++ + Sbjct: 83 GFYDGTNVDLIVELADAREAQRSYEANLKMFEQTRQM 119 >gi|114320063|ref|YP_741746.1| flagellar hook-associated protein FlgK [Alkalilimnicola ehrlichii MLHE-1] gi|114226457|gb|ABI56256.1| flagellar hook-associated protein FlgK [Alkalilimnicola ehrlichii MLHE-1] Length = 695 Score = 56.0 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 31/80 (38%), Gaps = 1/80 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + N G++ +A ++ L+ + N+SN +T GF +V+ S + + + V Sbjct: 1 MSGTMNTGISGLMAAQRALAATSHNISNVNTEGFSRQRVEQSSRL-PTGSGAGFVGNGVQ 59 Query: 61 SGKEYLSKEVGSFISTGTEL 80 + + Sbjct: 60 VDTVRRLADQNLIENVRNNT 79 >gi|312793870|ref|YP_004026793.1| flagellar hook-associated protein flgk [Caldicellulosiruptor kristjanssonii 177R1B] gi|312181010|gb|ADQ41180.1| flagellar hook-associated protein FlgK [Caldicellulosiruptor kristjanssonii 177R1B] Length = 527 Score = 56.0 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 22/192 (11%), Positives = 57/192 (29%), Gaps = 11/192 (5%) Query: 51 DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTD 110 I ++ + L ++ G L+ +G +F + RD + Sbjct: 343 GIPYYLNRLNEFARKLIEKFNELHKKGWSLNGQNKGINFFEPPVGQKFFYARDIKVSDAI 402 Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170 L + + Y V ++ + ++ N + + + ++ SQG Sbjct: 403 MNDLNNIATTYDVNNLPGGNDLVVDMLKLRNDTSIFKEGKFEDFLKSLISNLGVDSQG-- 460 Query: 171 RRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + N + + G + EM +I F + +I+ Sbjct: 461 ---AKNFAENQKVMVTQLDNRRQAVSG------VSIDEEMTNLIKYQHGFQASARMINAF 511 Query: 231 EKSMLEAIRNIA 242 ++ + + + Sbjct: 512 DEMLDTIVNRLG 523 Score = 43.7 bits (101), Expect = 0.021, Method: Composition-based stats. Identities = 11/77 (14%), Positives = 21/77 (27%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 I + L + N++N T G+ + + K V G Sbjct: 5 GLEIARTGIFVNRKGLEVTSHNVANASTPGYTRQVLNVKSNPPSSKVGFYSPKFQVGMGA 64 Query: 64 EYLSKEVGSFISTGTEL 80 + S E + + Sbjct: 65 DVQSLEQIRDMFLDMQY 81 >gi|293395581|ref|ZP_06639864.1| flagellar basal-body rod protein FlgC [Serratia odorifera DSM 4582] gi|291421900|gb|EFE95146.1| flagellar basal-body rod protein FlgC [Serratia odorifera DSM 4582] Length = 134 Score = 56.0 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 14/127 (11%), Positives = 42/127 (33%) Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172 ++ SG + + +V + K + + G VR Sbjct: 5 NIFDISGSALSAQSQRLNVSASNMANADSVSGPDGQPYRAKQVVFEVAAAPGQPTGGVRV 64 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 + P + + + +G++ N + + EM I ++ + + +++ + Sbjct: 65 ASIVDDPAPERLVFQPGNPLADAKGYVRMPNVDVVGEMVNTISASRSYQANVEVLNTTKS 124 Query: 233 SMLEAIR 239 M++ + Sbjct: 125 MMMKTLT 131 Score = 36.0 bits (81), Expect = 4.2, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 6/47 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFS 42 F+I +A A QRL+ A NM+N D+V +R +V F Sbjct: 4 LNIFDISGSALSAQSQRLNVSASNMANADSVSGPDGQPYRAKQVVFE 50 >gi|149375027|ref|ZP_01892800.1| Flagellar hook-associated protein [Marinobacter algicola DG893] gi|149360916|gb|EDM49367.1| Flagellar hook-associated protein [Marinobacter algicola DG893] Length = 682 Score = 56.0 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 33/88 (37%), Gaps = 3/88 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M NIGL L + L+T +N++N +T G+ +V+F Sbjct: 1 MAGLINIGLTGILGHQAALNTTGNNITNANTPGYSRQEVQFET---QSAQRTGAGSVGTG 57 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDA 88 + + +++ D +L G+ Sbjct: 58 VSITNIRRLANEYLTQQVREDSSLFGEQ 85 >gi|317406203|gb|EFV86452.1| flagellar basal-body rod protein FlgC [Achromobacter xylosoxidans C54] Length = 139 Score = 56.0 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 6/45 (13%), Positives = 21/45 (46%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +G++ N + + E MI ++ + + +++ + M + + Sbjct: 91 AQGYVSMPNVDPVAETVNMIAASRSYQANVEVLNTAKSLMQKTLT 135 Score = 37.2 bits (84), Expect = 2.3, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 6/47 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42 + F+I +A A QR++ A NM+N VG +R +V F Sbjct: 4 LSIFDIAGSALSAQSQRMNVAASNMANADSVVGPDGQPYRARQVVFQ 50 >gi|284041493|ref|YP_003391833.1| flagellar hook-associated protein FlgK [Conexibacter woesei DSM 14684] gi|283945714|gb|ADB48458.1| flagellar hook-associated protein FlgK [Conexibacter woesei DSM 14684] Length = 443 Score = 56.0 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 32/86 (37%), Gaps = 1/86 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 L +A +Q L+T N++N +T GF + F + A++ + + + + Sbjct: 8 GLQTSLRGLIAHQQALNTTGHNVANANTPGFSRQEAIFGAM-SALRLPTNSGTTGLGAQL 66 Query: 64 EYLSKEVGSFISTGTELDFALEGDAW 89 +G + LD G Sbjct: 67 GTGVDVLGIRRIRDSFLDLQFRGTNM 92 Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 5/39 (12%), Positives = 13/39 (33%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 + EM MI + + + + ++ + I Sbjct: 401 VSPDEEMTNMIRFQRGYQASARTMSTLDEMLDTLINRTG 439 >gi|239628952|ref|ZP_04671983.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239519098|gb|EEQ58964.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 118 Score = 56.0 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 11/58 (18%), Positives = 26/58 (44%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFV 59 + A+ + + N++N +T GF+ KV+F +V+ + +++ V Sbjct: 6 DRALGALERGMDAMWLKQQVSSHNIANVETPGFKAKKVEFKDVLRETEQGVERIAKPV 63 >gi|207728344|ref|YP_002256738.1| flagellar basal-body rod protein flgc [Ralstonia solanacearum MolK2] gi|207739739|ref|YP_002258132.1| flagellar basal-body rod protein flgc [Ralstonia solanacearum IPO1609] gi|206591590|emb|CAQ57202.1| flagellar basal-body rod protein flgc [Ralstonia solanacearum MolK2] gi|206593121|emb|CAQ60027.1| flagellar basal-body rod protein flgc [Ralstonia solanacearum IPO1609] Length = 168 Score = 56.0 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 20/43 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N + + EM MI ++ + + + + + +A+ Sbjct: 123 GYVTMPNVDVVDEMVNMISASRSYQANVEVANTTKTMAAKALT 165 Score = 40.6 bits (93), Expect = 0.21, Method: Composition-based stats. Identities = 15/85 (17%), Positives = 31/85 (36%), Gaps = 6/85 (7%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDT------VGFRTIKVKFSEVVGAIKNDIDQKI 56 ++ +A A +R++ VA N++N ++ +R +V FS G + Sbjct: 38 KVMDVAGSALTAQSKRMNVVASNLANAESVTGPDGTAYRAKQVVFSPEQGTDGYATGVSV 97 Query: 57 SFVASGKEYLSKEVGSFISTGTELD 81 V K + + + D Sbjct: 98 DGVVEDTVTPMKRMHQPGNPLADAD 122 >gi|292669735|ref|ZP_06603161.1| flagellar basal-body rod protein FlgB [Selenomonas noxia ATCC 43541] gi|292648532|gb|EFF66504.1| flagellar basal-body rod protein FlgB [Selenomonas noxia ATCC 43541] Length = 140 Score = 55.6 bits (132), Expect = 5e-06, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 37/89 (41%), Gaps = 5/89 (5%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN-DIDQKISFVASGK 63 +IG A A R +++N++N +T FR V+F +++ D D + V + Sbjct: 11 IDIGSRAMAAASLRHEVLSNNIANVNTPYFRRSHVRFEDLLKQELGMDSDPLMKVVRTHD 70 Query: 64 EY----LSKEVGSFISTGTELDFALEGDA 88 + + + I + L+G+ Sbjct: 71 RHLPAAFHGKARAVIEQDATTNMRLDGNN 99 >gi|310641541|ref|YP_003946299.1| flagellar basal-body rod protein flgc [Paenibacillus polymyxa SC2] gi|309246491|gb|ADO56058.1| Flagellar basal-body rod protein FlgC [Paenibacillus polymyxa SC2] Length = 150 Score = 55.6 bits (132), Expect = 5e-06, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 23/42 (54%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N + M EM MI T+ + + T ++ ++ + +A+ Sbjct: 105 GYVYMPNVDIMKEMVDMISATRSYEANVTALNASKAMVSKAL 146 Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 17/115 (14%), Positives = 36/115 (31%), Gaps = 17/115 (14%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV------G----FRTIKVK-------FSEV 44 F+I +A A R+ ++ N++N +T G +R V F++V Sbjct: 4 NNGFDISASALTAQRLRMDVISSNIANAETTRAKVENGQAIPYRRKTVVLEPNQSGFADV 63 Query: 45 VGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 + A + V + + + D +G + + Sbjct: 64 LKAQMEGSSTSAAGVKVSQIQEDQSPLKPVYNPGHPDADKDGYVYMPNVDIMKEM 118 >gi|51894142|ref|YP_076833.1| flagella basal body rod protein [Symbiobacterium thermophilum IAM 14863] gi|51857831|dbj|BAD41989.1| flagella basal body rod protein [Symbiobacterium thermophilum IAM 14863] Length = 119 Score = 55.6 bits (132), Expect = 5e-06, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 38/109 (34%), Gaps = 10/109 (9%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI---KNDIDQKISFVASGKEYLS 67 A A R +A+N++N T GF+ +V F + D DQ V + + Sbjct: 14 AIDAASLRQRVLANNLANAMTPGFKRSRVDFETELARALAKGGDPDQVRPTVVRETDSIG 73 Query: 68 KEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVS 116 + G+ + E W+A LTR +++ Sbjct: 74 RPDGNNVDVEAESVKMAANQIWYA-------ALTRQINDHFDRLRMVIT 115 >gi|308068650|ref|YP_003870255.1| flagellar basal-body rod protein flgC [Paenibacillus polymyxa E681] gi|305857929|gb|ADM69717.1| Flagellar basal-body rod protein flgC [Paenibacillus polymyxa E681] Length = 150 Score = 55.6 bits (132), Expect = 5e-06, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 23/42 (54%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N + M EM MI T+ + + T ++ ++ + +A+ Sbjct: 105 GYVYMPNVDIMKEMVDMISATRSYEANVTALNASKAMVSKAL 146 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 17/115 (14%), Positives = 36/115 (31%), Gaps = 17/115 (14%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV------G----FRTIKVK-------FSEV 44 F+I +A A R+ ++ N++N +T G +R V F++V Sbjct: 4 NNGFDISASALTAQRLRMDVISSNIANAETTRAKVENGQAVPYRRKTVVLEPNQSGFADV 63 Query: 45 VGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 + A + V + + + D +G + + Sbjct: 64 LKAQMEGSSTSAAGVKVSQIQEDQSPLKPVYNPGHPDADKDGYVYMPNVDIMKEM 118 >gi|23099008|ref|NP_692474.1| flagellar basal body rod protein FlgC [Oceanobacillus iheyensis HTE831] gi|22777236|dbj|BAC13509.1| flagellar basal-body rod protein [Oceanobacillus iheyensis HTE831] Length = 151 Score = 55.6 bits (132), Expect = 5e-06, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 25/43 (58%) Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 +G++E N + + EM ++ T+ + + T + ++ +++A+ Sbjct: 105 QGYVEMPNVDPLKEMVDLMSATRSYEANITAFNASKGMLMKAL 147 Score = 39.5 bits (90), Expect = 0.38, Method: Composition-based stats. Identities = 7/30 (23%), Positives = 13/30 (43%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV 32 S N + A R+ V+ N++N + Sbjct: 5 NSMNTSASGLTAQRLRMDIVSSNVANAQST 34 >gi|331006032|ref|ZP_08329374.1| Flagellar basal-body rod protein FlgC [gamma proteobacterium IMCC1989] gi|330420161|gb|EGG94485.1| Flagellar basal-body rod protein FlgC [gamma proteobacterium IMCC1989] Length = 140 Score = 55.6 bits (132), Expect = 5e-06, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N + EM MI ++ F +++ ++ M A+ Sbjct: 95 GYVFYPNVNVVEEMTNMISASRSFQINVEVMNSAKQMMQRALT 137 Score = 38.7 bits (88), Expect = 0.79, Method: Composition-based stats. Identities = 17/114 (14%), Positives = 33/114 (28%), Gaps = 6/114 (5%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQK 55 + F+I + A RL+T A N++N D +R F+ + + D + Sbjct: 4 DSVFSIAGSGMNAQSLRLNTTASNLANADAAASSIDETYRGRHPVFASLKDTLSMDSNGN 63 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109 S + + + E F +T + Sbjct: 64 ASVGVGVLGIVESDAPLQPRYEPGHPLSNEEGYVFYPNVNVVEEMTNMISASRS 117 >gi|196018952|ref|XP_002118898.1| hypothetical protein TRIADDRAFT_62888 [Trichoplax adhaerens] gi|190577813|gb|EDV18617.1| hypothetical protein TRIADDRAFT_62888 [Trichoplax adhaerens] Length = 140 Score = 55.6 bits (132), Expect = 5e-06, Method: Composition-based stats. Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 8/133 (6%) Query: 1 MQTSFNIGLA-AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFV 59 M ++ + A E + N+SN +T G++ F + ++ + V Sbjct: 1 MSSAGIAAVTQGMAAAEFITGKLGINLSNANTPGYKG----FGTYL---LSETSKYNGGV 53 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119 +G + G T E D+A+EGD +F LE I TR GR+++ + + S +G Sbjct: 54 NAGSRINANIQGEISETKKEFDYAIEGDGFFPLECGEQIKFTRAGRYELDNQDFIKSPNG 113 Query: 120 KYPVLDMASVPIQ 132 Y + + + Q Sbjct: 114 CYLLGEAYTDDNQ 126 >gi|311030132|ref|ZP_07708222.1| flagellar basal body rod protein FlgC [Bacillus sp. m3-13] Length = 150 Score = 55.6 bits (132), Expect = 5e-06, Method: Composition-based stats. Identities = 7/46 (15%), Positives = 25/46 (54%), Gaps = 1/46 (2%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G++E N + + EM ++ ++ + + T+ + ++ M++ + + Sbjct: 105 GYVELPNVDPLKEMVDLMSASRSYEANVTVFNASKGIMMKTL-ELG 149 Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 11/32 (34%), Positives = 17/32 (53%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32 M S NI +A A R+ ++ NM+N D+ Sbjct: 3 MFKSMNISSSALTAQRLRMDVISSNMANVDST 34 >gi|293605001|ref|ZP_06687397.1| flagellar basal-body rod protein FlgC [Achromobacter piechaudii ATCC 43553] gi|292816606|gb|EFF75691.1| flagellar basal-body rod protein FlgC [Achromobacter piechaudii ATCC 43553] Length = 139 Score = 55.6 bits (132), Expect = 5e-06, Method: Composition-based stats. Identities = 6/45 (13%), Positives = 21/45 (46%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +G++ N + + E MI ++ + + +++ + M + + Sbjct: 91 AQGYISMPNVDPVAETVNMIAASRSYQANVEVLNTAKSLMQKTLT 135 Score = 39.1 bits (89), Expect = 0.54, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 6/47 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42 + F+I +A A QR++ A N++N VG +R +V F Sbjct: 4 LSIFDIAGSALSAQSQRMNVTASNLANADSVVGPDGQPYRARQVVFQ 50 >gi|163789652|ref|ZP_02184090.1| Flagellar basal body rod protein FlgC [Carnobacterium sp. AT7] gi|159875184|gb|EDP69250.1| Flagellar basal body rod protein FlgC [Carnobacterium sp. AT7] Length = 145 Score = 55.6 bits (132), Expect = 5e-06, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 26/43 (60%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G+++ SN N EM M+ + +++ T ++ +++ + +A++ Sbjct: 99 GYVQQSNVNMADEMIDMMTTLRTYDANVTAMNASKEMLSKALQ 141 Score = 39.9 bits (91), Expect = 0.36, Method: Composition-based stats. Identities = 11/60 (18%), Positives = 26/60 (43%), Gaps = 7/60 (11%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTV----G---FRTIKVKFSEVVGAIKNDIDQKI 56 S I + +L T++ N++N +T G + +V F E + ++ ++ + Sbjct: 6 SMQINASGLSLERLKLDTISTNIANVNTTRTEDGEGPYLKKEVVFEESLKQVETSLNGQG 65 >gi|300311350|ref|YP_003775442.1| flagellar basal-body rod protein [Herbaspirillum seropedicae SmR1] gi|300074135|gb|ADJ63534.1| Flagellar basal-body rod protein [Herbaspirillum seropedicae SmR1] Length = 134 Score = 55.6 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N + EM MI ++ + + ++ + +++ + Sbjct: 89 GYVAMPNVNPVEEMVNMISASRAYQTNVETMNTAKAMLVKTLT 131 Score = 42.2 bits (97), Expect = 0.070, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 33/92 (35%), Gaps = 9/92 (9%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTD-------TVGFRTIKVKFSEV-VGAIKNDIDQ 54 FN+ +A A QRL+ A N++N D T ++ +V F + VG +K+ + Sbjct: 5 NIFNVAGSAMSAQSQRLNATASNIANADSATSPDGTP-YKAKQVVFQAIPVGGVKDSGVK 63 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEG 86 + V A+ Sbjct: 64 VAAVVEDQAPPKLVYDPKHPMADGNGYVAMPN 95 >gi|15616183|ref|NP_244488.1| flagellar hook-associated protein FlgK [Bacillus halodurans C-125] gi|10176245|dbj|BAB07340.1| flagellar hook-associated protein 1 (HAP1) [Bacillus halodurans C-125] Length = 556 Score = 55.6 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 12/85 (14%), Positives = 22/85 (25%), Gaps = 2/85 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + + L TV N++N +T G+ +V F V + + + Sbjct: 8 GLETARRGMMTQQAALRTVGHNIANANTPGYTRQRVNF--VQTQAYPGVGRNAPSIPGQV 65 Query: 64 EYLSKEVGSFISTGTELDFALEGDA 88 LD Sbjct: 66 GTGVMAGSIQRIRDAFLDLQYRQHN 90 Score = 44.5 bits (103), Expect = 0.011, Method: Composition-based stats. Identities = 8/41 (19%), Positives = 16/41 (39%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S + EM MI +N+ I + ++ + I + Sbjct: 512 SQVSLDEEMTLMIQFQHAYNAAARNITQIDEMLDRIINGMG 552 >gi|238916198|ref|YP_002929715.1| flagellar hook-associated protein 1 FlgK [Eubacterium eligens ATCC 27750] gi|238871558|gb|ACR71268.1| flagellar hook-associated protein 1 FlgK [Eubacterium eligens ATCC 27750] Length = 646 Score = 55.6 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 24/55 (43%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 IG + L+T A N+SN +T G+ +V FS+ N D+ S Sbjct: 7 GLFIGTTGLKTAQTALNTTAHNLSNINTSGYTRQQVTFSDTQYVRVNTSDKVSSP 61 >gi|211639036|emb|CAR67650.1| flagellar hook protein flge [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] Length = 72 Score = 55.6 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 11/59 (18%), Positives = 28/59 (47%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 +F+ ++ A L + +N++N T GF++ F+++ + + K+S + Sbjct: 2 AFSQAVSGLNAAAANLDVIGNNIANAATYGFKSSSAAFADIFAGSQVGLGVKMSGINQN 60 >gi|34498342|ref|NP_902557.1| flagellar basal-body rod protein flgC [Chromobacterium violaceum ATCC 12472] gi|34104196|gb|AAQ60555.1| flagellar basal-body rod protein flgC [Chromobacterium violaceum ATCC 12472] Length = 136 Score = 55.6 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 22/43 (51%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N + EM MI ++ + + +++ + + + ++ Sbjct: 91 GYVTMPNVNVVEEMADMIAASRAYQNNVEMMNTAKSLLQKTLQ 133 Score = 38.7 bits (88), Expect = 0.76, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 6/48 (12%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNT----DTVG--FRTIKVKFSEV 44 FNI +A A RL+ VA N++N + G ++ V F+ V Sbjct: 5 NLFNISGSALSAQSMRLNVVASNLANAESATSSTGQPYKGRHVVFTAV 52 >gi|15642198|ref|NP_231830.1| flagellar basal body rod protein FlgC [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121586290|ref|ZP_01676080.1| flagellar basal-body rod protein FlgC [Vibrio cholerae 2740-80] gi|121726545|ref|ZP_01679794.1| flagellar basal-body rod protein FlgC [Vibrio cholerae V52] gi|147675208|ref|YP_001217716.1| flagellar basal body rod protein FlgC [Vibrio cholerae O395] gi|153817070|ref|ZP_01969737.1| flagellar basal-body rod protein FlgC [Vibrio cholerae NCTC 8457] gi|153820804|ref|ZP_01973471.1| flagellar basal-body rod protein FlgC [Vibrio cholerae B33] gi|227082323|ref|YP_002810874.1| flagellar basal-body rod protein FlgC [Vibrio cholerae M66-2] gi|229507724|ref|ZP_04397229.1| flagellar basal-body rod protein FlgC [Vibrio cholerae BX 330286] gi|229512081|ref|ZP_04401560.1| flagellar basal-body rod protein FlgC [Vibrio cholerae B33] gi|229519217|ref|ZP_04408660.1| flagellar basal-body rod protein FlgC [Vibrio cholerae RC9] gi|229607228|ref|YP_002877876.1| flagellar basal body rod protein FlgC [Vibrio cholerae MJ-1236] gi|254849328|ref|ZP_05238678.1| flagellar basal-body rod protein FlgC [Vibrio cholerae MO10] gi|255747102|ref|ZP_05421047.1| flagellar basal-body rod protein FlgC [Vibrio cholera CIRS 101] gi|262161354|ref|ZP_06030464.1| flagellar basal-body rod protein FlgC [Vibrio cholerae INDRE 91/1] gi|262167775|ref|ZP_06035477.1| flagellar basal-body rod protein FlgC [Vibrio cholerae RC27] gi|298500423|ref|ZP_07010228.1| flagellar basal-body rod protein FlgC [Vibrio cholerae MAK 757] gi|9656755|gb|AAF95344.1| flagellar basal-body rod protein FlgC [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121549556|gb|EAX59582.1| flagellar basal-body rod protein FlgC [Vibrio cholerae 2740-80] gi|121630998|gb|EAX63377.1| flagellar basal-body rod protein FlgC [Vibrio cholerae V52] gi|126512338|gb|EAZ74932.1| flagellar basal-body rod protein FlgC [Vibrio cholerae NCTC 8457] gi|126521596|gb|EAZ78819.1| flagellar basal-body rod protein FlgC [Vibrio cholerae B33] gi|146317091|gb|ABQ21630.1| flagellar basal-body rod protein FlgC [Vibrio cholerae O395] gi|227010211|gb|ACP06423.1| flagellar basal-body rod protein FlgC [Vibrio cholerae M66-2] gi|227014095|gb|ACP10305.1| flagellar basal-body rod protein FlgC [Vibrio cholerae O395] gi|229343906|gb|EEO08881.1| flagellar basal-body rod protein FlgC [Vibrio cholerae RC9] gi|229352046|gb|EEO16987.1| flagellar basal-body rod protein FlgC [Vibrio cholerae B33] gi|229355229|gb|EEO20150.1| flagellar basal-body rod protein FlgC [Vibrio cholerae BX 330286] gi|229369883|gb|ACQ60306.1| flagellar basal-body rod protein FlgC [Vibrio cholerae MJ-1236] gi|254845033|gb|EET23447.1| flagellar basal-body rod protein FlgC [Vibrio cholerae MO10] gi|255735504|gb|EET90904.1| flagellar basal-body rod protein FlgC [Vibrio cholera CIRS 101] gi|262023840|gb|EEY42539.1| flagellar basal-body rod protein FlgC [Vibrio cholerae RC27] gi|262028665|gb|EEY47319.1| flagellar basal-body rod protein FlgC [Vibrio cholerae INDRE 91/1] gi|297541116|gb|EFH77170.1| flagellar basal-body rod protein FlgC [Vibrio cholerae MAK 757] Length = 138 Score = 55.6 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 24/43 (55%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ SN N M EM MI ++ + + + D +++ +L ++ Sbjct: 93 GYIYKSNVNVMEEMANMISASRSYQTNVQVADASKQMLLRTLQ 135 >gi|294679035|ref|YP_003579650.1| flagellar basal-body rod protein FlgC [Rhodobacter capsulatus SB 1003] gi|294477855|gb|ADE87243.1| flagellar basal-body rod protein FlgC [Rhodobacter capsulatus SB 1003] Length = 131 Score = 55.6 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 24/56 (42%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 ++ ++ + A RL V++N++N DT G+ V+F E+ Sbjct: 6 STLSVSASGLKAQSMRLRHVSENIANADTPGYHRKVVRFEELAAQKDGGATGVELG 61 Score = 42.9 bits (99), Expect = 0.037, Method: Composition-based stats. Identities = 7/47 (14%), Positives = 21/47 (44%), Gaps = 3/47 (6%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS---MLEAIRN 240 G+ + SN + + E+ + + + + D+ + ++E +R Sbjct: 85 GYYDGSNVDLVVEIADARQAQRSYEANLRMFDQTRQMSSALMELLRR 131 >gi|306821564|ref|ZP_07455162.1| flagellar hook-associated protein FlgK [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550309|gb|EFM38302.1| flagellar hook-associated protein FlgK [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 536 Score = 55.6 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 10/61 (16%), Positives = 22/61 (36%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 + N + A ++ L T+ N++N +T G+ + S + + V Sbjct: 20 SGLNAATSGLFAAQRVLDTIGHNIANQNTPGYTRQRANQSAASATSIENGNYLGMGVKMS 79 Query: 63 K 63 Sbjct: 80 S 80 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 18/43 (41%) Query: 200 EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 E S+ + E+ M+ +N+ +I ++ + I + Sbjct: 490 EVSSVSENEELTNMVKFQHAYNASARMITTVDEMIDVLINRMG 532 >gi|331269312|ref|YP_004395804.1| flagellar basal-body rod protein FlgC [Clostridium botulinum BKT015925] gi|329125862|gb|AEB75807.1| flagellar basal-body rod protein FlgC [Clostridium botulinum BKT015925] Length = 145 Score = 55.3 bits (131), Expect = 6e-06, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G++ N N + EM MI T+ + + T I+ ++ ++A+ I Sbjct: 100 GYVLMPNVNILNEMADMIAATRAYEANVTAINSSKNMFMKAL-EIG 144 Score = 39.5 bits (90), Expect = 0.45, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 20/49 (40%), Gaps = 8/49 (16%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV-G-------FRTIKVKFSE 43 +S I + A R+ T++ N++N T G +R F E Sbjct: 5 SSLRISASGLSAERLRMDTISSNITNFKTTRGKDGQKEPYRRKIAVFQE 53 >gi|312877567|ref|ZP_07737526.1| flagellar hook-associated protein FlgK [Caldicellulosiruptor lactoaceticus 6A] gi|311795642|gb|EFR12012.1| flagellar hook-associated protein FlgK [Caldicellulosiruptor lactoaceticus 6A] Length = 522 Score = 55.3 bits (131), Expect = 7e-06, Method: Composition-based stats. Identities = 21/192 (10%), Positives = 57/192 (29%), Gaps = 11/192 (5%) Query: 51 DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTD 110 I ++ + + L ++ + G L+ G +F + R + Sbjct: 338 GIPYYLNRLNEFAQKLIEKFNELHTQGWSLNGQNTGINFFEPPVGQTFFYARYIKVSDAI 397 Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170 L + + Y V ++ + ++ N + + + ++ SQG Sbjct: 398 MNDLNNIATTYDVNNLPGGNDLVVDMLKLRNDTSIFKEGKFEDFLKSLISNLGVDSQG-- 455 Query: 171 RRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + N + + G + EM +I F + +I+ Sbjct: 456 ---AKNFAENQKVMVTQLDNRRQAVSG------VSIDEEMTNLIKYQHGFQASARMINAF 506 Query: 231 EKSMLEAIRNIA 242 ++ + + + Sbjct: 507 DEMLDTIVNRLG 518 Score = 43.3 bits (100), Expect = 0.031, Method: Composition-based stats. Identities = 11/77 (14%), Positives = 21/77 (27%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 I + L + N++N T G+ + + K V G Sbjct: 5 GLEIARTGIFVNRKGLEVTSHNVANASTPGYTRQVLNVKSNPPSSKVGFYSPKFQVGMGA 64 Query: 64 EYLSKEVGSFISTGTEL 80 + S E + + Sbjct: 65 DVQSLEQIRDMFLDMQY 81 >gi|241766918|ref|ZP_04764724.1| flagellar basal-body rod protein FlgC [Acidovorax delafieldii 2AN] gi|241362622|gb|EER58470.1| flagellar basal-body rod protein FlgC [Acidovorax delafieldii 2AN] Length = 134 Score = 55.3 bits (131), Expect = 7e-06, Method: Composition-based stats. Identities = 15/96 (15%), Positives = 37/96 (38%), Gaps = 1/96 (1%) Query: 144 EKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSN 203 G+ + +V+ D S G S + +G++ SN Sbjct: 37 PDGQAYKARQVVFQTAPMGADSSAGVRVSAISENNTPGRRIHDPSHPSAD-AQGYVTHSN 95 Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 N++ EM MI ++ + + +++ + +L+ ++ Sbjct: 96 VNAVDEMVNMISASRSYQNNVEVMNTAKSLLLKTLQ 131 Score = 42.2 bits (97), Expect = 0.062, Method: Composition-based stats. Identities = 19/109 (17%), Positives = 39/109 (35%), Gaps = 6/109 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQ 54 M + F++ +A A QRL+ VA N++N D V ++ +V F + Sbjct: 3 MFSIFSVSGSAISAQSQRLNVVASNLANVDAVAGPDGQAYKARQVVFQTAPMGADSSAGV 62 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103 ++S ++ + + + + E I +R Sbjct: 63 RVSAISENNTPGRRIHDPSHPSADAQGYVTHSNVNAVDEMVNMISASRS 111 >gi|157362949|ref|YP_001469716.1| flagellar basal-body rod protein FlgC [Thermotoga lettingae TMO] gi|157313553|gb|ABV32652.1| flagellar basal-body rod protein FlgC [Thermotoga lettingae TMO] Length = 137 Score = 55.3 bits (131), Expect = 7e-06, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 20/43 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N + EM +I + + + + + + + A++ Sbjct: 91 GYVSLPNVNVLREMVDLISAQRSYEANISAFNTTKSMINSALQ 133 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 29/78 (37%), Gaps = 6/78 (7%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDIDQKISF 58 N+ + A R+ ++ N++N++T G +R FSE + + + Sbjct: 7 MNVSASGMTAQRLRVDIISSNIANSETTRTDRGTPYRRRVPVFSEYLISDGKSASTGVKV 66 Query: 59 VASGKEYLSKEVGSFIST 76 V ++ + S Sbjct: 67 VRIEEDPSPFRLVYDPSH 84 >gi|146296278|ref|YP_001180049.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145409854|gb|ABP66858.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 146 Score = 55.3 bits (131), Expect = 7e-06, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 20/43 (46%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + G++ N + + EM MI ++ + + T ++ + + Sbjct: 99 QNGYVNYPNVDIVTEMVNMIEASRAYEANVTAMNITKSMITRI 141 Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 6/49 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43 M + NI +A A R+ +A N++N +T G +R V F E Sbjct: 3 MFDAINISASALHAQRVRMDVIAQNIANANTTRTEDGTPYRRKIVVFEE 51 >gi|325274802|ref|ZP_08140830.1| flagellar basal body rod protein FlgC [Pseudomonas sp. TJI-51] gi|324100070|gb|EGB97888.1| flagellar basal body rod protein FlgC [Pseudomonas sp. TJI-51] Length = 87 Score = 55.3 bits (131), Expect = 7e-06, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 32/73 (43%), Gaps = 6/73 (8%) Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 +G V +++ + P P + K G++ N N + EM MI ++ F + L Sbjct: 18 KGIVEDQSNLEARYEPNHPAAN------KDGYVYYPNVNVVEEMADMISASRAFQTNAEL 71 Query: 227 IDENEKSMLEAIR 239 ++ + M + + Sbjct: 72 MNTAKSMMQKVLT 84 >gi|85858815|ref|YP_461017.1| flagellar basal-body rod protein [Syntrophus aciditrophicus SB] gi|85721906|gb|ABC76849.1| flagellar basal-body rod protein [Syntrophus aciditrophicus SB] Length = 143 Score = 55.3 bits (131), Expect = 7e-06, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 21/44 (47%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 ++G + N N M EM MI ++ + + T D + L+ + Sbjct: 96 QQGNVAMPNVNVMMEMTDMITASRAYEACVTAFDATKNMALKTL 139 Score = 44.9 bits (104), Expect = 0.010, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 20/51 (39%), Gaps = 8/51 (15%) Query: 1 MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSE 43 M TSF I + A ++ +A N++N T ++ FS Sbjct: 1 MDFLTSFRICSSGFAAQRAKMDVIASNLANVSTTSTPEGGPYKRKVAIFSS 51 >gi|89072309|ref|ZP_01158888.1| putative flagellar hook-associated protein [Photobacterium sp. SKA34] gi|89051841|gb|EAR57293.1| putative flagellar hook-associated protein [Photobacterium sp. SKA34] Length = 144 Score = 55.3 bits (131), Expect = 7e-06, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 23/67 (34%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 NIGL A + L A N++N +T GF + S + G + + Sbjct: 1 MNMINIGLTGLNANKTALDVTAHNVANVNTPGFSRQQAMMSALAGNNILSAGSGVEVASI 60 Query: 62 GKEYLSK 68 + Sbjct: 61 RRISDQF 67 >gi|290474970|ref|YP_003467854.1| flagellar basal body rod cell-proximal protein [Xenorhabdus bovienii SS-2004] gi|289174287|emb|CBJ81077.1| flagellar biosynthesis; cell-proximal portion of basal-body rod [Xenorhabdus bovienii SS-2004] Length = 134 Score = 55.3 bits (131), Expect = 7e-06, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N + + EM I ++ + + +++ + ML+ + Sbjct: 89 GYVRMPNVDVVGEMVNTISASRSYQANIEVLNTTKSIMLKTLT 131 Score = 38.7 bits (88), Expect = 0.64, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 6/47 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42 + F+I +A A QRL+ A NM+N VG +R +V F Sbjct: 4 LSIFDIASSALSAQSQRLNVSASNMANADSVVGPDGEPYRAKQVVFR 50 >gi|327441057|dbj|BAK17422.1| flagellar basal body rod protein [Solibacillus silvestris StLB046] Length = 154 Score = 55.3 bits (131), Expect = 7e-06, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 24/42 (57%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G+++ SN + + EM +I ++ + + T + N+ + +A+ Sbjct: 108 GYVQMSNVDVLKEMVDLISASRSYEANITAFNANKNMLTKAL 149 Score = 44.1 bits (102), Expect = 0.016, Method: Composition-based stats. Identities = 8/29 (27%), Positives = 14/29 (48%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTV 32 S N +A R+ ++ N++N DT Sbjct: 6 SMNTTASALTTQRLRMDVISSNIANVDTT 34 >gi|301631992|ref|XP_002945075.1| PREDICTED: flagellar basal-body rod protein flgC-like [Xenopus (Silurana) tropicalis] Length = 134 Score = 55.3 bits (131), Expect = 7e-06, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 29/64 (45%), Gaps = 6/64 (9%) Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 G P P D G++ SN N++ EM MI ++ + + +++ + +L Sbjct: 74 GRRVFDPGHPSADGE------GYVNHSNVNAVEEMVNMISASRSYQNNVEVMNTAKTLLL 127 Query: 236 EAIR 239 + ++ Sbjct: 128 KTLQ 131 Score = 39.9 bits (91), Expect = 0.31, Method: Composition-based stats. Identities = 18/107 (16%), Positives = 37/107 (34%), Gaps = 6/107 (5%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKI 56 + FN+ +A A QRL+ VA N++N D V ++ +V F + ++ Sbjct: 5 SIFNVSGSAISAQSQRLNVVASNLANVDAVAGPDGQAYKARQVVFQTTPMGSDSAAGVRV 64 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103 + + + + + + E I +R Sbjct: 65 RSIEESQVPGRRVFDPGHPSADGEGYVNHSNVNAVEEMVNMISASRS 111 >gi|260886628|ref|ZP_05897891.1| flagellar basal-body rod protein FlgB [Selenomonas sputigena ATCC 35185] gi|260863771|gb|EEX78271.1| flagellar basal-body rod protein FlgB [Selenomonas sputigena ATCC 35185] Length = 142 Score = 55.3 bits (131), Expect = 7e-06, Method: Composition-based stats. Identities = 8/45 (17%), Positives = 20/45 (44%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46 + ++ A R ++ N++N +T F+ V F +++ Sbjct: 13 NRALDVMQRGMGAANLRQEVISHNIANVNTPNFKKSNVVFEDLLA 57 >gi|289670508|ref|ZP_06491583.1| flagellar basal body rod protein FlgF [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 90 Score = 55.3 bits (131), Expect = 7e-06, Method: Composition-based stats. Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 2/88 (2%) Query: 9 LAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSK 68 + A Q STV+ N++N DTVGF+ I+ + + Sbjct: 1 MTGARASLQAQSTVSHNLANVDTVGFKAALANTEAF--KIQGKGYPSRIDALHVDQGFDR 58 Query: 69 EVGSFISTGTELDFALEGDAWFALESPR 96 G TG LD +L+ D W A++SP Sbjct: 59 SQGHQKVTGNPLDVSLQQDRWLAVQSPD 86 >gi|218288292|ref|ZP_03492591.1| flagellar basal-body rod protein FlgC [Alicyclobacillus acidocaldarius LAA1] gi|218241651|gb|EED08824.1| flagellar basal-body rod protein FlgC [Alicyclobacillus acidocaldarius LAA1] Length = 144 Score = 55.3 bits (131), Expect = 7e-06, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 22/42 (52%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++E SN N +M +I T+ + + T D ++ + A+ Sbjct: 99 GYVESSNVNLTTQMVDLIQATRAYQANATAFDAAKQMAVTAL 140 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 16/95 (16%), Positives = 35/95 (36%), Gaps = 15/95 (15%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTI---------KVKFSEVVG 46 TS +I + A + L+ +A+N++N +T G +R V F +G Sbjct: 4 NTSMDISASGLAANQLWLNVIANNIANVNTTRTPQGGPYRAEIVNFAPVENDVSFQTALG 63 Query: 47 AIKNDIDQKISFVASGKEYLSKEVGSFISTGTELD 81 I + + ++ ++ S ++ Sbjct: 64 QAVQGIGGGVEVTSITQDTSPFQLIYDPSNPDAVN 98 >gi|126734103|ref|ZP_01749850.1| flagellar basal-body rod protein FlgC [Roseobacter sp. CCS2] gi|126716969|gb|EBA13833.1| flagellar basal-body rod protein FlgC [Roseobacter sp. CCS2] Length = 130 Score = 55.3 bits (131), Expect = 7e-06, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 32/77 (41%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + ++ + A RL V++N++NTDT G+R + F E+V + + + + Sbjct: 7 AISVATSGMKAQASRLRHVSENIANTDTPGYRRKAITFEELVTQGRTTGAVETGPLRLDQ 66 Query: 64 EYLSKEVGSFISTGTEL 80 L + + Sbjct: 67 TELKRVYDPSHPLADDT 83 Score = 40.6 bits (93), Expect = 0.20, Method: Composition-based stats. Identities = 8/45 (17%), Positives = 19/45 (42%), Gaps = 1/45 (2%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 G SN N + E+ + + + + D+ + M A+ ++ Sbjct: 84 GHYNGSNVNLLIEIADAREAQRSYEANLKMFDQVRQ-MSSALNDL 127 >gi|224370168|ref|YP_002604332.1| FlgG1 [Desulfobacterium autotrophicum HRM2] gi|223692885|gb|ACN16168.1| FlgG1 [Desulfobacterium autotrophicum HRM2] Length = 117 Score = 55.3 bits (131), Expect = 7e-06, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 16/43 (37%) Query: 200 EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 E SN + E I + F + T I ++ + + + Sbjct: 75 ELSNTDLAGEFTDQIITQRAFEANTRTIQTEDQMLGTLLDIVG 117 Score = 39.5 bits (90), Expect = 0.39, Method: Composition-based stats. Identities = 8/39 (20%), Positives = 19/39 (48%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39 M + N +A A +++ A+N++N + F+ + Sbjct: 1 MGFAINTSASALKAFGTKMAVSANNVANVYSDDFKKSRA 39 >gi|329901228|ref|ZP_08272753.1| Flagellar basal-body rod protein FlgC [Oxalobacteraceae bacterium IMCC9480] gi|327549160|gb|EGF33752.1| Flagellar basal-body rod protein FlgC [Oxalobacteraceae bacterium IMCC9480] Length = 122 Score = 55.3 bits (131), Expect = 8e-06, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N + EM MI ++ + + ++ + +L+ + Sbjct: 77 GYVSMPNVNVVEEMVNMISASRSYQTNVETMNAAKTLLLKTLT 119 Score = 39.1 bits (89), Expect = 0.52, Method: Composition-based stats. Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 6/39 (15%) Query: 12 QLALEQRLSTVADNMSNT----DTVG--FRTIKVKFSEV 44 A QRL+ VA N++N T G ++ +V FS V Sbjct: 1 MSAQAQRLNVVASNIANADSTTSTNGQVYKAKQVVFSAV 39 >gi|323490140|ref|ZP_08095360.1| flagellar basal body rod protein FlgC [Planococcus donghaensis MPA1U2] gi|323396188|gb|EGA89014.1| flagellar basal body rod protein FlgC [Planococcus donghaensis MPA1U2] Length = 151 Score = 55.3 bits (131), Expect = 8e-06, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 24/42 (57%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ SN + + EM ++ T+ + + T ++ ++ ++A+ Sbjct: 106 GYVRMSNVDPLQEMVDLMSATRSYEANVTALNASKSMFMKAL 147 Score = 42.5 bits (98), Expect = 0.052, Method: Composition-based stats. Identities = 9/29 (31%), Positives = 15/29 (51%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTV 32 FNI + A R+ V+ N++N +T Sbjct: 6 GFNISSSGLTANRLRMDVVSANIANANTN 34 >gi|261856354|ref|YP_003263637.1| flagellar hook-associated protein FlgK [Halothiobacillus neapolitanus c2] gi|261836823|gb|ACX96590.1| flagellar hook-associated protein FlgK [Halothiobacillus neapolitanus c2] Length = 549 Score = 55.3 bits (131), Expect = 8e-06, Method: Composition-based stats. Identities = 23/134 (17%), Positives = 51/134 (38%), Gaps = 1/134 (0%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-QKISFV 59 M + + LA++Q L+T +N++N +T G+ +V + + +N V Sbjct: 1 MPDLMSNSVTGLLAMQQALATTGNNIANANTPGYSRERVNLASMQAQYQNGSYIGSGVQV 60 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119 AS + + S ++ T + +L F + + + T G + T + + Sbjct: 61 ASVTRVYDQFITSQLNAATTTNSSLTFQNDFTTQVTQLLGDTSSGIAQQTQAFFNATQAI 120 Query: 120 KYPVLDMASVPIQI 133 D + + Sbjct: 121 AANPTDATARSTFL 134 >gi|114566383|ref|YP_753537.1| flagellar basal body rod protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337318|gb|ABI68166.1| flagellar basal body rod protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 155 Score = 55.3 bits (131), Expect = 8e-06, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N N + EM MI T+ + + +I+ + + A+ Sbjct: 110 GYVNYPNVNIVEEMINMISATRAYEANAQVIEATKSIAMRAL 151 Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 20/49 (40%), Gaps = 7/49 (14%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDT------VG-FRTIKVKFSE 43 S + + A R+ T+A NM+N +T G +R V F Sbjct: 4 LNSIDTSASGLTAQRLRMDTIASNMANVETTRVDNRTGPYRRQVVVFEA 52 >gi|222530141|ref|YP_002574023.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor bescii DSM 6725] gi|222456988|gb|ACM61250.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor bescii DSM 6725] Length = 145 Score = 55.3 bits (131), Expect = 8e-06, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 20/43 (46%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + G++ N + + EM MI ++ + + T ++ + + Sbjct: 98 QNGYVNYPNVDIVTEMVNMIEASRSYEANVTALNITKSMITRT 140 Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 6/49 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43 M + NI +A A R+ +A N++N +T G +R V F E Sbjct: 1 MFDAINISSSALSAQRVRMDVIAQNIANANTTRTENGQPYRRKVVVFEE 49 >gi|121533765|ref|ZP_01665592.1| flagellar basal-body rod protein FlgC [Thermosinus carboxydivorans Nor1] gi|121307756|gb|EAX48671.1| flagellar basal-body rod protein FlgC [Thermosinus carboxydivorans Nor1] Length = 143 Score = 55.3 bits (131), Expect = 8e-06, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 21/44 (47%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N N + EM M+ + + + T I+ + L+A+ Sbjct: 96 AAGYVAMPNVNIIAEMVDMMTAARAYEANVTAINAAKSMALKAL 139 Score = 52.2 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 12/112 (10%), Positives = 34/112 (30%), Gaps = 16/112 (14%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKV---------KFSEVVGAI 48 + + + A R+ +++N++N +T G +R V F++++ Sbjct: 6 AIDAAASGMTAERLRMDVISNNIANANTTRTPEGGPYRRQMVIFQPRAGQNSFADLLSGK 65 Query: 49 KNDIDQKISF-VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 ++ ++ V + + A+ A Sbjct: 66 VENVGVRVVGIVKDEAPFRQVFDPNHPDANAAGYVAMPNVNIIAEMVDMMTA 117 >gi|294084412|ref|YP_003551170.1| flgK flagellar hook-associated protein 1 [Candidatus Puniceispirillum marinum IMCC1322] gi|292663985|gb|ADE39086.1| FlgK flagellar hook-associated protein 1 [Candidatus Puniceispirillum marinum IMCC1322] Length = 1402 Score = 55.3 bits (131), Expect = 8e-06, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 26/50 (52%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50 M + F+IG + + Q L+ N++N +T G++ + E+ G+ + Sbjct: 1 MASLFDIGKSGLSSYRQALAVTGQNIANINTDGYKRREANLEEIQGSTGS 50 Score = 41.8 bits (96), Expect = 0.088, Method: Composition-based stats. Identities = 24/165 (14%), Positives = 50/165 (30%), Gaps = 13/165 (7%) Query: 84 LEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVG 143 + G F + TR SA G L ++ Sbjct: 1244 INGIVDFVDTETGTTMATRTLDAYKEA-----SAKGFAVKLSGELEIEDKFHIATNYDGV 1298 Query: 144 EKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP---NIPPTPLEDLSGVTVKRGFLE 200 G + + T +D+ GF S ++ ++ + L + T++ LE Sbjct: 1299 GDGRNLKAIIDLQTPNDEELDIG-GFQEVFGSMVAELGSSVRTSKLTLEAAQTLRDASLE 1357 Query: 201 D----SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 S N E ++I Q + + ++ + +++I Sbjct: 1358 AEASYSGVNLDTEASRLIEQQQAYQASARILSTARELFQTLMQSI 1402 >gi|259907632|ref|YP_002647988.1| Flagellar basal-body rod protein, FlgC [Erwinia pyrifoliae Ep1/96] gi|224963254|emb|CAX54738.1| Flagellar basal-body rod protein, FlgC [Erwinia pyrifoliae Ep1/96] gi|283477474|emb|CAY73390.1| Flagellar basal-body rod protein flgC [Erwinia pyrifoliae DSM 12163] gi|310764862|gb|ADP09812.1| Flagellar basal-body rod protein, FlgC [Erwinia sp. Ejp617] Length = 134 Score = 55.3 bits (131), Expect = 8e-06, Method: Composition-based stats. Identities = 11/92 (11%), Positives = 34/92 (36%) Query: 148 ISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSM 207 + + + + G V+ S E + + ++G++ N N + Sbjct: 40 QPYRARQVTFEVDAAAGNEIGGVKVGEVVESSAPDRLVYEPGNPLADQQGYVRMPNVNVV 99 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 EM + ++ + + +++ + ML+ + Sbjct: 100 DEMVNTLSASRSYQANVEVMNSAKAMMLKTLS 131 >gi|226944490|ref|YP_002799563.1| flagellar basal-body rod protein [Azotobacter vinelandii DJ] gi|226719417|gb|ACO78588.1| flagellar basal-body rod protein [Azotobacter vinelandii DJ] Length = 135 Score = 54.9 bits (130), Expect = 9e-06, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 24/43 (55%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N ++EM MI ++ + + +++ +++ +L+ + Sbjct: 89 GYVSLPNVEPVHEMVNMIAASRSYQANVEVMNTSKQMLLKTLT 131 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 33/81 (40%), Gaps = 6/81 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQ 54 M F+I +A A QR++ A N++N D+VG +R +V F + + Sbjct: 3 MFNIFDIAGSALSAQSQRMNVTASNLANVDSVGSEDGQAYRAKQVLFESMARGRSDTGGV 62 Query: 55 KISFVASGKEYLSKEVGSFIS 75 ++ V L +E Sbjct: 63 RVVQVVEDPSPLRQEYRPEHP 83 >gi|299536009|ref|ZP_07049328.1| flagellar hook-associated protein FlgK [Lysinibacillus fusiformis ZC1] gi|298728614|gb|EFI69170.1| flagellar hook-associated protein FlgK [Lysinibacillus fusiformis ZC1] Length = 555 Score = 54.9 bits (130), Expect = 9e-06, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 20/41 (48%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S+ + EM MI Q +N+ +I ++++ + I + Sbjct: 511 SSVSLDEEMTNMITFQQAYNANARMITVVDETLDKIINGMG 551 Score = 42.2 bits (97), Expect = 0.063, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 27/79 (34%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 + L T N+SN +T+G+ +V G ++Q I G + + Sbjct: 14 GLFTQQTALYTTGHNISNANTLGYSRQRVNMQATPGFPTAGLNQPIYPGHLGTGVEAGSI 73 Query: 71 GSFISTGTELDFALEGDAW 89 + + E + + Sbjct: 74 QRIRDEFIDRQYRQETNKF 92 >gi|242238967|ref|YP_002987148.1| flagellar basal-body rod protein FlgC [Dickeya dadantii Ech703] gi|242131024|gb|ACS85326.1| flagellar basal-body rod protein FlgC [Dickeya dadantii Ech703] Length = 134 Score = 54.9 bits (130), Expect = 9e-06, Method: Composition-based stats. Identities = 8/61 (13%), Positives = 26/61 (42%) Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 P+ + + + +RG++ N + EM I ++ + + +++ + M + + Sbjct: 71 PSPDKLVYQPGNPLADQRGYVRMPNVDVAAEMVNSISASRSYQANVEVLNTAKTLMQKTL 130 Query: 239 R 239 Sbjct: 131 T 131 Score = 36.8 bits (83), Expect = 2.7, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 6/42 (14%) Query: 7 IGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42 I +A A QR++ A N++N G +R +V F Sbjct: 9 ISGSALTAQSQRMNVSASNLANADSVTGPDGQPYRAKQVVFK 50 >gi|37525839|ref|NP_929183.1| flagellar basal body rod protein FlgC [Photorhabdus luminescens subsp. laumondii TTO1] gi|36785268|emb|CAE14209.1| Flagellar basal-body rod protein FlgC (Putative proximal rod protein) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 134 Score = 54.9 bits (130), Expect = 9e-06, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N + + EM I ++ + + +++ + ML+ + Sbjct: 89 GYVRMPNVDVVGEMINTISASRSYQANVEVLNTTKSMMLKTLT 131 Score = 39.5 bits (90), Expect = 0.47, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 31/80 (38%), Gaps = 6/80 (7%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQK 55 + F+I +A A QRL+ A NM+N D+V +R +V F A + + Sbjct: 4 LSIFDIAGSALSAQSQRLNVSASNMANADSVAGPDGQPYRAKQVVFRVAAPAGQETGGVR 63 Query: 56 ISFVASGKEYLSKEVGSFIS 75 +S + E Sbjct: 64 VSEIVDDPTPFRLEYQPGHP 83 >gi|222053600|ref|YP_002535962.1| flagellar basal-body rod protein FlgC [Geobacter sp. FRC-32] gi|221562889|gb|ACM18861.1| flagellar basal-body rod protein FlgC [Geobacter sp. FRC-32] Length = 146 Score = 54.9 bits (130), Expect = 9e-06, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 27/75 (36%), Gaps = 4/75 (5%) Query: 168 GFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 G V+ P + P + G++ N N + EM MI T+ + + T Sbjct: 75 GVVQITEDQTPPRLQYDPTHPDADAK---GYVALPNVNVVEEMADMIAATRTYEANVTAA 131 Query: 228 DENEKSMLEAIRNIA 242 + L+ + + Sbjct: 132 QAAKSMALKTL-ELG 145 Score = 42.2 bits (97), Expect = 0.067, Method: Composition-based stats. Identities = 11/51 (21%), Positives = 23/51 (45%), Gaps = 8/51 (15%) Query: 1 MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43 M TS +I +A A R++ ++ N++N + G ++ F+ Sbjct: 1 MDFFTSMDISASALTAERTRMNLISSNLANAGSTRTAEGGPYKRKDAVFAA 51 >gi|291613036|ref|YP_003523193.1| flagellar basal-body rod protein FlgC [Sideroxydans lithotrophicus ES-1] gi|291583148|gb|ADE10806.1| flagellar basal-body rod protein FlgC [Sideroxydans lithotrophicus ES-1] Length = 134 Score = 54.9 bits (130), Expect = 9e-06, Method: Composition-based stats. Identities = 7/44 (15%), Positives = 23/44 (52%) Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +G++ N N + EM MI ++ + + +++ ++ + + + Sbjct: 88 QGYVTMPNVNPVDEMVNMISASRSYQNNVDVLNTSKTLLTKTLT 131 Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 42/120 (35%), Gaps = 6/120 (5%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDT-VG-----FRTIKVKFSEVVGAIKNDIDQKI 56 FNI +A A QRL+ VA N++N D+ G ++ +V FS V + K+ Sbjct: 5 NIFNIAGSAMTAQSQRLNVVASNLANVDSATGPDGKPYKAKQVVFSTVPITGQVGEGVKV 64 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVS 116 + V + + + E I +R + V + + Sbjct: 65 AAVVEDNSPMKTVYDPKNPLADGQGYVTMPNVNPVDEMVNMISASRSYQNNVDVLNTSKT 124 >gi|312621566|ref|YP_004023179.1| flagellar basal-body rod protein flgc [Caldicellulosiruptor kronotskyensis 2002] gi|312202033|gb|ADQ45360.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor kronotskyensis 2002] Length = 145 Score = 54.9 bits (130), Expect = 9e-06, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 20/43 (46%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + G++ N + + EM MI ++ + + T ++ + + Sbjct: 98 QNGYVNYPNVDIVTEMVNMIEASRSYEANVTALNITKSMITRT 140 Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 6/49 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43 M + NI +A A R+ +A N++N +T G +R V F E Sbjct: 1 MFDAINISSSALSAQRVRMDVIAQNIANANTTRTENGQPYRRKVVVFEE 49 >gi|302872573|ref|YP_003841209.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor obsidiansis OB47] gi|302575432|gb|ADL43223.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor obsidiansis OB47] Length = 145 Score = 54.9 bits (130), Expect = 9e-06, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 20/43 (46%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + G++ N + + EM MI ++ + + T ++ + + Sbjct: 98 QNGYVNYPNVDIVTEMVNMIEASRSYEANVTALNITKSMITRT 140 Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 6/49 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43 M + NI +A A R+ +A N++N +T G +R V F E Sbjct: 1 MFDAINISSSALTAQRVRMDVIAQNIANANTTRTESGQPYRRKIVVFEE 49 >gi|326319095|ref|YP_004236767.1| flagellar basal-body rod protein FlgC [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375931|gb|ADX48200.1| flagellar basal-body rod protein FlgC [Acidovorax avenae subsp. avenae ATCC 19860] Length = 134 Score = 54.9 bits (130), Expect = 9e-06, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 24/43 (55%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ SN N + EM MI ++ + + +++ + +L+ ++ Sbjct: 89 GYVTHSNVNPVEEMVNMISASRSYQNNVEVLNTTKSLLLKTLQ 131 Score = 41.8 bits (96), Expect = 0.085, Method: Composition-based stats. Identities = 19/109 (17%), Positives = 39/109 (35%), Gaps = 6/109 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQ 54 M + F + +A A QRL+ VA N++N D V ++ +V F + Sbjct: 3 MFSIFGVSGSAISAQAQRLNVVASNLANVDAVAGPDGQAYKARQVVFQTAPMGDEGAAGV 62 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103 ++S ++ + + + + + E I +R Sbjct: 63 RVSAISESQAPGKRVLDPTHPQADAEGYVTHSNVNPVEEMVNMISASRS 111 >gi|269836584|ref|YP_003318812.1| flagellar basal-body rod protein FlgC [Sphaerobacter thermophilus DSM 20745] gi|269785847|gb|ACZ37990.1| flagellar basal-body rod protein FlgC [Sphaerobacter thermophilus DSM 20745] Length = 154 Score = 54.9 bits (130), Expect = 9e-06, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 28/84 (33%), Gaps = 6/84 (7%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDIDQKISF 58 + ++ A R+ +A N++N DT G +R +V F+ V Sbjct: 7 MRVSMSGLTAQRLRMDVIASNIANVDTTRTPEGGPYRRRQVVFTAVPATDSRPSAGGFQR 66 Query: 59 VASGKEYLSKEVGSFISTGTELDF 82 V + + S T D Sbjct: 67 VLAPVDPQSNAGQGVAVTAIRTDP 90 Score = 44.1 bits (102), Expect = 0.016, Method: Composition-based stats. Identities = 6/43 (13%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 GF+ + + + EM ++ ++ + + T+++ + A+ Sbjct: 108 GFVLRPDIDVITEMTDLLAASRAYEANVTVLNAVKAMASRALT 150 >gi|323703166|ref|ZP_08114819.1| flagellar basal-body rod protein FlgB [Desulfotomaculum nigrificans DSM 574] gi|323531825|gb|EGB21711.1| flagellar basal-body rod protein FlgB [Desulfotomaculum nigrificans DSM 574] Length = 132 Score = 54.9 bits (130), Expect = 9e-06, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 20/50 (40%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 A R +A+N++N +T GF+ V F E + A + Sbjct: 15 GLDASALRQRVIANNVANLNTPGFKKSYVSFEEQLKAAMESGGGPLKGTH 64 >gi|120613057|ref|YP_972735.1| flagellar basal-body rod protein FlgC [Acidovorax citrulli AAC00-1] gi|120591521|gb|ABM34961.1| flagellar basal-body rod protein FlgC [Acidovorax citrulli AAC00-1] Length = 134 Score = 54.9 bits (130), Expect = 9e-06, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 24/43 (55%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ SN N + EM MI ++ + + +++ + +L+ ++ Sbjct: 89 GYVTHSNVNPVEEMVNMISASRSYQNNVEVLNTTKSLLLKTLQ 131 Score = 41.8 bits (96), Expect = 0.096, Method: Composition-based stats. Identities = 19/109 (17%), Positives = 39/109 (35%), Gaps = 6/109 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQ 54 M + F + +A A QRL+ VA N++N D V ++ +V F + Sbjct: 3 MFSIFGVSGSAISAQAQRLNVVASNLANVDAVAGPDGQAYKARQVVFQTAPMGGEGAAGV 62 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103 ++S ++ + + + + + E I +R Sbjct: 63 RVSAISESQAPGKRVLDPTHPQADAEGYVTHSNVNPVEEMVNMISASRS 111 >gi|292489135|ref|YP_003532022.1| flagellar basal-body rod protein FlgC [Erwinia amylovora CFBP1430] gi|292900254|ref|YP_003539623.1| flagellar basal-body rod protein [Erwinia amylovora ATCC 49946] gi|291200102|emb|CBJ47228.1| flagellar basal-body rod protein [Erwinia amylovora ATCC 49946] gi|291554569|emb|CBA22184.1| Flagellar basal-body rod protein flgC [Erwinia amylovora CFBP1430] gi|312173293|emb|CBX81548.1| Flagellar basal-body rod protein flgC [Erwinia amylovora ATCC BAA-2158] Length = 134 Score = 54.9 bits (130), Expect = 9e-06, Method: Composition-based stats. Identities = 11/92 (11%), Positives = 34/92 (36%) Query: 148 ISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSM 207 + + + + G V+ S E + + ++G++ N N + Sbjct: 40 QPYRARQVTFEVDAAAGNEIGGVKVGEVVESSAPDRLVYEPGNPLADQQGYVRMPNVNVV 99 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 EM + ++ + + +++ + ML+ + Sbjct: 100 DEMVNTLSASRSYQANVEVMNSAKAMMLKTLS 131 >gi|238796902|ref|ZP_04640406.1| Flagellar basal-body rod protein flgC [Yersinia mollaretii ATCC 43969] gi|238719162|gb|EEQ10974.1| Flagellar basal-body rod protein flgC [Yersinia mollaretii ATCC 43969] Length = 121 Score = 54.9 bits (130), Expect = 9e-06, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N + EM I ++ + + +++ + ML+ + Sbjct: 76 GYVRMPNVNVVSEMVNTISASRSYQANVEVMNTAKSMMLKTLT 118 >gi|223038370|ref|ZP_03608664.1| flagellar basal-body rod protein FlgG (Distal rod protein) [Campylobacter rectus RM3267] gi|222880227|gb|EEF15314.1| flagellar basal-body rod protein FlgG (Distal rod protein) [Campylobacter rectus RM3267] Length = 41 Score = 54.9 bits (130), Expect = 9e-06, Method: Composition-based stats. Identities = 6/39 (15%), Positives = 19/39 (48%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 SN + + Q+I + + F + + I +++ + ++ Sbjct: 1 MSNVDLSRSLTQLIVVQRGFQANSKTITTSDEMLNTLLQ 39 >gi|110677659|ref|YP_680666.1| flagellar basal body rod protein FlgC [Roseobacter denitrificans OCh 114] gi|163733139|ref|ZP_02140583.1| flagellar basal-body rod protein FlgC [Roseobacter litoralis Och 149] gi|109453775|gb|ABG29980.1| flagellar basal-body rod protein FlgC [Roseobacter denitrificans OCh 114] gi|161393674|gb|EDQ17999.1| flagellar basal-body rod protein FlgC [Roseobacter litoralis Och 149] Length = 129 Score = 54.9 bits (130), Expect = 9e-06, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 25/80 (31%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 S ++ + A RL +++N+SN DT G+R V F G + Sbjct: 6 KSLDVTTSGLKAQATRLRHLSENISNADTPGYRRKLVSFETAFGGQGVSTVETSRVRLDQ 65 Query: 63 KEYLSKEVGSFISTGTELDF 82 S F Sbjct: 66 STLERVYDPSHPMADESGYF 85 Score = 43.3 bits (100), Expect = 0.033, Method: Composition-based stats. Identities = 7/48 (14%), Positives = 21/48 (43%), Gaps = 3/48 (6%) Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS---MLEAIRN 240 G+ + SN + + E+ + + + + ++ K ++E +R Sbjct: 82 SGYFDGSNVDLLIELSDAREAQRSYEANLKVFEQTRKMSSSLMELLRK 129 >gi|83647167|ref|YP_435602.1| flagellar hook-associated protein [Hahella chejuensis KCTC 2396] gi|83635210|gb|ABC31177.1| Flagellar hook-associated protein [Hahella chejuensis KCTC 2396] Length = 892 Score = 54.9 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 22/50 (44%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 NIGL A + L+T +N+SN +T G+ +V+F Sbjct: 4 NVINIGLTGLKASQTALATTGNNVSNANTEGYSRQRVEFEATPSQFIGAG 53 >gi|332525068|ref|ZP_08401248.1| flagellar basal-body rod protein FlgC [Rubrivivax benzoatilyticus JA2] gi|332108357|gb|EGJ09581.1| flagellar basal-body rod protein FlgC [Rubrivivax benzoatilyticus JA2] Length = 139 Score = 54.9 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 24/43 (55%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ SN N++ EM MI ++ + + +++ + + + ++ Sbjct: 93 GYVTFSNVNAVQEMVDMISASRSYQNNVEVMNTAKTLLQKTLQ 135 Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQ 54 M F++ +A A QRL+ VA N++N DTV ++ +V F + D Sbjct: 3 MFRIFDVSGSAVSAQSQRLNVVASNLANADTVAGPDGQAYKARQVVFQTALMDAGADPAS 62 >gi|170694390|ref|ZP_02885544.1| flagellar basal-body rod protein FlgC [Burkholderia graminis C4D1M] gi|170140813|gb|EDT08987.1| flagellar basal-body rod protein FlgC [Burkholderia graminis C4D1M] Length = 127 Score = 54.9 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 10/61 (16%), Positives = 25/61 (40%) Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 P T + + G++ N + + EM MI ++ + + ++ + ML+ + Sbjct: 64 PTPMKTAYDPGNPAANADGYVTLPNVDPVQEMVNMISASRSYQANVETLNTAKTLMLKTL 123 Query: 239 R 239 Sbjct: 124 T 124 Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 6/36 (16%) Query: 12 QLALEQRLSTVADNMSNT-DTVG-----FRTIKVKF 41 A QRL+ A N++N T G ++ +V F Sbjct: 1 MSAQSQRLNVTASNLANADSTTGPDGQPYKAKQVVF 36 >gi|160939632|ref|ZP_02086980.1| hypothetical protein CLOBOL_04524 [Clostridium bolteae ATCC BAA-613] gi|158437423|gb|EDP15187.1| hypothetical protein CLOBOL_04524 [Clostridium bolteae ATCC BAA-613] Length = 118 Score = 54.9 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 9/58 (15%), Positives = 23/58 (39%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFV 59 + + + + N++N +T G++ KV+F +V+ ++ V Sbjct: 6 DRALGALERGMDGMWLKQQIASHNIANVETPGYKAKKVEFRDVLYETAQGTERISKPV 63 >gi|149912830|ref|ZP_01901364.1| flagellar basal-body rod protein FlgC [Roseobacter sp. AzwK-3b] gi|149813236|gb|EDM73062.1| flagellar basal-body rod protein FlgC [Roseobacter sp. AzwK-3b] Length = 130 Score = 54.9 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 14/40 (35%), Positives = 22/40 (55%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 S ++ + A QRL V++N++N DT G+R V F Sbjct: 7 SLSVSASGLKAQAQRLRHVSENIANADTPGYRRKTVSFEA 46 Score = 39.5 bits (90), Expect = 0.42, Method: Composition-based stats. Identities = 4/33 (12%), Positives = 12/33 (36%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 SN + E+ + + + + D+ + Sbjct: 88 SSNVQLVIEIADAREAQRSYEANLKMFDQARQM 120 >gi|187478183|ref|YP_786207.1| flagellar basal body rod protein FlgC [Bordetella avium 197N] gi|115422769|emb|CAJ49297.1| flagellar basal-body rod protein [Bordetella avium 197N] Length = 139 Score = 54.9 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 6/45 (13%), Positives = 21/45 (46%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +G++ N + + E MI ++ + + +++ ++ M + Sbjct: 91 AQGYVAMPNVDPVAETVNMIAASRSYQANIEVLNTAKQLMQRTLT 135 Score = 36.0 bits (81), Expect = 4.2, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 7/60 (11%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKISFVA 60 I +A A QRL+ A N++N D+V +R +V F + A+ Q+I V Sbjct: 9 ISGSALAAQSQRLNVAASNLANADSVAGPDGQPYRARQVVFQ-MNPALGQAAGQEIGGVK 67 >gi|83589620|ref|YP_429629.1| flagellar basal-body rod protein FlgB [Moorella thermoacetica ATCC 39073] gi|83572534|gb|ABC19086.1| flagellar basal-body rod protein FlgB [Moorella thermoacetica ATCC 39073] Length = 132 Score = 54.9 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 12/83 (14%), Positives = 26/83 (31%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 + A R T+A N++N +T GF+ +V F + + + + Sbjct: 7 MYVLEKALDTATLRQRTIAHNIANVNTPGFKRYQVSFEDQLSRALGLEPGLPLYRTNPYH 66 Query: 65 YLSKEVGSFISTGTELDFALEGD 87 + + + D Sbjct: 67 LPPSGLELAPQVSRDTSTTMRQD 89 >gi|289523577|ref|ZP_06440431.1| flagellar basal-body rod protein FlgB [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503269|gb|EFD24433.1| flagellar basal-body rod protein FlgB [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 135 Score = 54.9 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 20/122 (16%), Positives = 41/122 (33%), Gaps = 12/122 (9%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 L +R ++ N++NT+T G+ +V F + + + + +A+ E + Sbjct: 12 GMKGLSKRFEAISQNVANTNTPGYARSEVTFEDELREALSVSKRPKLPLATTHEAHITNL 71 Query: 71 GSFISTGTELDFALEG------------DAWFALESPRGIILTRDGRFKVTDDGSLVSAS 118 I T + + G D + + + T GS +A Sbjct: 72 PRDIKGITPKEHRVVGELARWDGNGVDLDIEMSKLAQARMTYTALASLMSKRVGSYKTAI 131 Query: 119 GK 120 G Sbjct: 132 GG 133 >gi|169826733|ref|YP_001696891.1| flagellar hook-associated protein FlgK [Lysinibacillus sphaericus C3-41] gi|168991221|gb|ACA38761.1| Flagellar hook-associated protein 1 (HAP1) [Lysinibacillus sphaericus C3-41] Length = 530 Score = 54.9 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 19/41 (46%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S + EM MI Q +N+ +I ++++ + I + Sbjct: 486 SAVSLDEEMTNMITFQQAYNANARMITVVDETLDKIINGMG 526 Score = 41.4 bits (95), Expect = 0.10, Method: Composition-based stats. Identities = 12/72 (16%), Positives = 24/72 (33%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 + L T N+SN +T+G+ +V G ++Q G + + Sbjct: 14 GLFVQQTALYTTGHNISNANTLGYSRQRVNMQATPGFPTAGLNQPTYPGHLGTGVEAGSI 73 Query: 71 GSFISTGTELDF 82 S + + Sbjct: 74 QRIRSEFIDRQY 85 >gi|237653577|ref|YP_002889891.1| flagellar hook-associated protein FlgK [Thauera sp. MZ1T] gi|237624824|gb|ACR01514.1| flagellar hook-associated protein FlgK [Thauera sp. MZ1T] Length = 660 Score = 54.9 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 26/196 (13%), Positives = 51/196 (26%), Gaps = 3/196 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + NIGL A + L+T + N++N T GF V Sbjct: 1 MASLLNIGLTGLSASQAYLNTTSHNIANAATPGFHRQTVTQEARDPQYSGGAFFGTGTGV 60 Query: 61 S---GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSA 117 + E + ++A L++ T G+L + Sbjct: 61 TGVARSYSQLLEGQVLSADSRRAEYAAYSQFISQLDNVLADADTGLTPALNEFFGALQNV 120 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177 + + + G IS+ + + T +++ G+ Sbjct: 121 TSNPTNVAARQALLSSGDTLSARFRTLDGRISEIAEGVETEMRSTLESINGYAAAIAELN 180 Query: 178 SPNIPPTPLEDLSGVT 193 + S Sbjct: 181 ERMVISRTGGAGSAAN 196 >gi|157371209|ref|YP_001479198.1| flagellar basal body rod protein FlgC [Serratia proteamaculans 568] gi|157322973|gb|ABV42070.1| flagellar basal-body rod protein FlgC [Serratia proteamaculans 568] Length = 134 Score = 54.9 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 6/43 (13%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N + + EM I ++ + + +++ + M++ + Sbjct: 89 GYVRMPNVDVVGEMVNTISASRSYQANVEVLNTTKSMMMKTLT 131 Score = 35.6 bits (80), Expect = 5.5, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 6/47 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFS 42 F+I +A A QRL+ A NM+N D+V +R +V F Sbjct: 4 LNIFDISGSALSAQSQRLNVSASNMANADSVSGPDGQPYRAKQVVFE 50 >gi|148266225|ref|YP_001232931.1| flagellar basal-body rod protein FlgC [Geobacter uraniireducens Rf4] gi|146399725|gb|ABQ28358.1| flagellar basal-body rod protein FlgC [Geobacter uraniireducens Rf4] Length = 146 Score = 54.9 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 30/80 (37%), Gaps = 3/80 (3%) Query: 159 GLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 G V G V+ P + P + ++G++ N N + EM MI T+ Sbjct: 66 GNRGVPQQVGVVQINEDQNPPRLQYDPTHPDAN---QQGYVALPNVNVVEEMADMIAATR 122 Query: 219 KFNSITTLIDENEKSMLEAI 238 + + T + ++ + Sbjct: 123 TYEANVTAAQAAKSMAMKTL 142 Score = 38.3 bits (87), Expect = 0.85, Method: Composition-based stats. Identities = 17/107 (15%), Positives = 38/107 (35%), Gaps = 13/107 (12%) Query: 1 MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFS-----EVVGA 47 M TS +I +A A R++ ++ N++N ++ G +R FS E + Sbjct: 1 MDFFTSMDISSSALTAERTRMNLISSNLANANSTRTAEGGPYRRKDAVFSARPVAESFSS 60 Query: 48 IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES 94 + + + G ++++ + AL + Sbjct: 61 VFSKTGNRGVPQQVGVVQINEDQNPPRLQYDPTHPDANQQGYVALPN 107 >gi|308050374|ref|YP_003913940.1| flagellar basal-body rod protein FlgC [Ferrimonas balearica DSM 9799] gi|307632564|gb|ADN76866.1| flagellar basal-body rod protein FlgC [Ferrimonas balearica DSM 9799] Length = 139 Score = 54.9 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 8/45 (17%), Positives = 20/45 (44%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + G++ N N + EM MI ++ + + + + + +R Sbjct: 91 QEGYIYKPNVNVVEEMANMISASRSYQANVQVASAAKDMAQQTLR 135 Score = 43.3 bits (100), Expect = 0.026, Method: Composition-based stats. Identities = 12/62 (19%), Positives = 24/62 (38%), Gaps = 6/62 (9%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56 F+ + A RL+T A N++N ++V +R + F + +Q + Sbjct: 5 KIFDTAGSGMSAQSVRLNTTASNIANANSVSSSAGETYRARQPIFEAALQQASGYQNQSV 64 Query: 57 SF 58 Sbjct: 65 PV 66 >gi|224418356|ref|ZP_03656362.1| hypothetical protein HcanM9_03665 [Helicobacter canadensis MIT 98-5491] Length = 36 Score = 54.9 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 9/36 (25%), Positives = 18/36 (50%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRT 36 M S G++ + + ++N++N +T GFR Sbjct: 1 MVGSLYSGISGIKTHQTGIDVTSNNIANVNTTGFRA 36 >gi|312962289|ref|ZP_07776780.1| flagellar hook-associated protein FlgK [Pseudomonas fluorescens WH6] gi|311283216|gb|EFQ61806.1| flagellar hook-associated protein FlgK [Pseudomonas fluorescens WH6] Length = 678 Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 10/51 (19%), Positives = 24/51 (47%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 + NIG++ A + LS +++N++N +T G+ + + + Sbjct: 1 MSLLNIGMSGLNAAQGSLSVLSNNIANVNTPGYSRQQTTQNAGASNPYGGV 51 Score = 36.0 bits (81), Expect = 4.5, Method: Composition-based stats. Identities = 14/89 (15%), Positives = 30/89 (33%), Gaps = 9/89 (10%) Query: 162 SVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSN---------ANSMYEMGQ 212 +VD + G + + + + + G L +N N E G Sbjct: 590 AVDGNAGVSLVSANSRLVSQVGSKAAQANTDSTATGALLAANKAASNSVSQVNLDEEAGD 649 Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIRNI 241 MI Q + + + +I +++ I + Sbjct: 650 MIKFQQYYTASSQIIKAAQETFSTLINAL 678 >gi|294635608|ref|ZP_06714085.1| flagellar basal-body rod protein FlgC [Edwardsiella tarda ATCC 23685] gi|291091060|gb|EFE23621.1| flagellar basal-body rod protein FlgC [Edwardsiella tarda ATCC 23685] Length = 134 Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 6/43 (13%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N + + EM I ++ + + +++ + M++ + Sbjct: 89 GYVRMPNVDVVGEMVNSIAASRSYQANVEVLNTTKSLMMKTLT 131 Score = 39.1 bits (89), Expect = 0.59, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 6/47 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42 + F+I +A A +R++ A N++N G +R +V F Sbjct: 4 LSIFDISGSALTAQSKRMNVAASNLANADSVTGPDGEPYRAKQVVFQ 50 >gi|126652479|ref|ZP_01724651.1| flagellar hook-associated protein K [Bacillus sp. B14905] gi|126590750|gb|EAZ84865.1| flagellar hook-associated protein K [Bacillus sp. B14905] Length = 530 Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 19/41 (46%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S + EM MI Q +N+ +I ++++ + I + Sbjct: 486 SAVSLDEEMTNMITFQQAYNANARMITVVDETLDKIINGMG 526 Score = 41.8 bits (96), Expect = 0.080, Method: Composition-based stats. Identities = 12/72 (16%), Positives = 24/72 (33%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 + L T N+SN +T+G+ +V G ++Q G + + Sbjct: 14 GLFVQQTALYTTGHNISNANTLGYSRQRVNMQATPGFPTAGLNQPTYPGHLGTGVEASSI 73 Query: 71 GSFISTGTELDF 82 S + + Sbjct: 74 QRIRSEFIDRQY 85 >gi|269138580|ref|YP_003295280.1| flagellar basal body rod protein [Edwardsiella tarda EIB202] gi|267984240|gb|ACY84069.1| flagellar basal body rod protein [Edwardsiella tarda EIB202] gi|304558590|gb|ADM41254.1| Flagellar basal-body rod protein FlgC [Edwardsiella tarda FL6-60] Length = 134 Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 6/43 (13%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N + + EM I ++ + + +++ + M++ + Sbjct: 89 GYVRMPNVDVVGEMVNSIAASRSYQANVEVLNTTKSLMMKTLT 131 Score = 39.1 bits (89), Expect = 0.59, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 6/47 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42 + F+I +A A +R++ A N++N G +R +V F Sbjct: 4 LSIFDISGSALTAQSKRMNVAASNLANADSVTGPDGEPYRAKQVVFQ 50 >gi|160903121|ref|YP_001568702.1| flagellar basal-body rod protein FlgC [Petrotoga mobilis SJ95] gi|160360765|gb|ABX32379.1| flagellar basal-body rod protein FlgC [Petrotoga mobilis SJ95] Length = 140 Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 7/42 (16%), Positives = 18/42 (42%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N N + EM M+ + + +++ + A+ Sbjct: 95 GYVSYPNVNVLREMVDMMSAQRAYEMNAAVVNSAKSMYNSAL 136 Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 19/137 (13%), Positives = 35/137 (25%), Gaps = 18/137 (13%) Query: 1 MQTSFN----IGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKN 50 M I + A RL ++ N++N+DT G +R V F E + N Sbjct: 1 MMDGLFKVLDIAASGMTAERFRLDVISQNLANSDTTRTEEGGPYRRKAVIFQEALSESTN 60 Query: 51 D--------IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTR 102 + + + + + G + Sbjct: 61 GDRNFGGVKVSSIVEDPSPFRLVYDPNHPDADAEGYVSYPNVNVLREMVDMMSAQRAYEM 120 Query: 103 DGRFKVTDDGSLVSASG 119 + + SA G Sbjct: 121 NAAVVNSAKSMYNSALG 137 >gi|15596275|ref|NP_249769.1| flagellar basal body rod protein FlgC [Pseudomonas aeruginosa PAO1] gi|107100523|ref|ZP_01364441.1| hypothetical protein PaerPA_01001548 [Pseudomonas aeruginosa PACS2] gi|116049007|ref|YP_792191.1| flagellar basal body rod protein FlgC [Pseudomonas aeruginosa UCBPP-PA14] gi|152984084|ref|YP_001349652.1| flagellar basal body rod protein FlgC [Pseudomonas aeruginosa PA7] gi|218892958|ref|YP_002441827.1| flagellar basal body rod protein FlgC [Pseudomonas aeruginosa LESB58] gi|254234214|ref|ZP_04927537.1| flagellar basal-body rod protein FlgC [Pseudomonas aeruginosa C3719] gi|254239436|ref|ZP_04932758.1| flagellar basal-body rod protein FlgC [Pseudomonas aeruginosa 2192] gi|296390558|ref|ZP_06880033.1| flagellar basal body rod protein FlgC [Pseudomonas aeruginosa PAb1] gi|313106033|ref|ZP_07792292.1| flagellar basal-body rod protein FlgC [Pseudomonas aeruginosa 39016] gi|9946994|gb|AAG04467.1|AE004539_9 flagellar basal-body rod protein FlgC [Pseudomonas aeruginosa PAO1] gi|115584228|gb|ABJ10243.1| flagellar basal-body rod protein FlgC [Pseudomonas aeruginosa UCBPP-PA14] gi|126166145|gb|EAZ51656.1| flagellar basal-body rod protein FlgC [Pseudomonas aeruginosa C3719] gi|126192814|gb|EAZ56877.1| flagellar basal-body rod protein FlgC [Pseudomonas aeruginosa 2192] gi|150959242|gb|ABR81267.1| flagellar basal-body rod protein FlgC [Pseudomonas aeruginosa PA7] gi|218773186|emb|CAW28998.1| flagellar basal-body rod protein FlgC [Pseudomonas aeruginosa LESB58] gi|310878794|gb|EFQ37388.1| flagellar basal-body rod protein FlgC [Pseudomonas aeruginosa 39016] Length = 146 Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 15/72 (20%), Positives = 32/72 (44%), Gaps = 6/72 (8%) Query: 168 GFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 G V ++S + P P D + G++ N N + EM MI ++ F + ++ Sbjct: 78 GIVEDQSSLMPRYEPNHPAADAN------GYVYYPNVNVVEEMADMISASRAFQTNAEMM 131 Query: 228 DENEKSMLEAIR 239 + ++ M + + Sbjct: 132 NTAKQMMQKVLT 143 Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 37/101 (36%), Gaps = 11/101 (10%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDID----- 53 FNI + A RL+TVA N++N +TV +R FS + + D Sbjct: 7 FNIAGSGMSAQSTRLNTVASNIANAETVSSSVDKTYRARHPVFSTMFQQAQGDSGSLFAD 66 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES 94 Q S + ++ S + A + + + + Sbjct: 67 QDSSGAGVQVLGIVEDQSSLMPRYEPNHPAADANGYVYYPN 107 >gi|270262403|ref|ZP_06190674.1| flagellar basal-body rod protein FlgC [Serratia odorifera 4Rx13] gi|270043087|gb|EFA16180.1| flagellar basal-body rod protein FlgC [Serratia odorifera 4Rx13] Length = 134 Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 6/43 (13%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N + + EM I ++ + + +++ + M++ + Sbjct: 89 GYVRMPNVDVVSEMVNTISASRSYQANVEVLNTTKSMMMKTLT 131 Score = 36.8 bits (83), Expect = 2.4, Method: Composition-based stats. Identities = 17/80 (21%), Positives = 27/80 (33%), Gaps = 6/80 (7%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSEVVGAIKNDIDQK 55 F+I +A A QR++ A NM+N G +R +V F A + + Sbjct: 4 LNIFDISGSALSAQSQRMNVSASNMANADSVTGPDGEPYRAKQVVFEVAAAAGQPTGGVR 63 Query: 56 ISFVASGKEYLSKEVGSFIS 75 +S V Sbjct: 64 VSQVVDDPAPERLVYQPGNP 83 >gi|260682026|ref|YP_003213311.1| flagellar basal-body rod protein [Clostridium difficile CD196] gi|260685624|ref|YP_003216757.1| flagellar basal-body rod protein [Clostridium difficile R20291] gi|260208189|emb|CBA60524.1| flagellar basal-body rod protein [Clostridium difficile CD196] gi|260211640|emb|CBE01891.1| flagellar basal-body rod protein [Clostridium difficile R20291] Length = 128 Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 10/46 (21%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G++E N N + EM +I ++ ++S ++ + + +A+ I Sbjct: 83 GYVEYPNVNILVEMTDLITASRAYDSNVDTLNAQKSMISKAL-EIG 127 Score = 44.9 bits (104), Expect = 0.010, Method: Composition-based stats. Identities = 16/111 (14%), Positives = 33/111 (29%), Gaps = 6/111 (5%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKISF 58 I + A ++ ++ N++N + +R V F E + K++ Sbjct: 1 MRISASGLTAESLKMDIISSNVANINATRGPNGEAYRRKVVSFEENYDNKLGMLGVKVTS 60 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109 V K L + + + +E I +R V Sbjct: 61 VEDDKSPLKEVYDPSHPDAKPNGYVEYPNVNILVEMTDLITASRAYDSNVD 111 >gi|258511369|ref|YP_003184803.1| flagellar basal-body rod protein FlgC [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478095|gb|ACV58414.1| flagellar basal-body rod protein FlgC [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 144 Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 22/42 (52%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++E SN N +M +I T+ + + T D ++ + A+ Sbjct: 99 GYVETSNVNLTTQMVDLIQATRAYQANATAFDAAKQMAVTAL 140 Score = 48.7 bits (114), Expect = 7e-04, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 35/95 (36%), Gaps = 15/95 (15%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTI---------KVKFSEVVG 46 TS NI + A + L+ +A+N++N +T G +R V F +G Sbjct: 4 NTSMNISASGLAANQLWLNVIANNIANVNTTRTPQGGPYRAEIVNFAPVENDVSFQTALG 63 Query: 47 AIKNDIDQKISFVASGKEYLSKEVGSFISTGTELD 81 I + + ++ ++ S ++ Sbjct: 64 QAVQGIGGGVEVTSITQDTSPFQLIYDPSNPDAVN 98 >gi|255099395|ref|ZP_05328372.1| putative flagellar hook-associated protein [Clostridium difficile QCD-63q42] gi|255305252|ref|ZP_05349424.1| putative flagellar hook-associated protein [Clostridium difficile ATCC 43255] Length = 436 Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 22/41 (53%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 + N + A ++ + T++ N+SN DT G+ + +F+ Sbjct: 6 SILNTANSGMNAHQKAIQTISHNISNLDTDGYSRQRTEFAT 46 Score = 50.3 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 6/40 (15%), Positives = 17/40 (42%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 S + EM ++I + + + + ++ + + I I Sbjct: 396 SGVSLDEEMTELIKIQRSYQASAKVMSTAVQLLDVVINGI 435 >gi|89098646|ref|ZP_01171528.1| flagellar basal-body rod protein C [Bacillus sp. NRRL B-14911] gi|89086608|gb|EAR65727.1| flagellar basal-body rod protein C [Bacillus sp. NRRL B-14911] Length = 149 Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 25/42 (59%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G+++ N + + EM +I T+ + + T+ + ++ M++A+ Sbjct: 104 GYVQMPNVDPLREMVDLISATRSYEANVTVFNASKSMMMKAL 145 Score = 41.8 bits (96), Expect = 0.092, Method: Composition-based stats. Identities = 10/32 (31%), Positives = 16/32 (50%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32 M S N +A A R+ ++ NM+N D+ Sbjct: 3 MFHSMNTTSSALTAQRLRMDVISSNMANVDST 34 >gi|304310785|ref|YP_003810383.1| Flagellar basal-body rod protein FlgC [gamma proteobacterium HdN1] gi|301796518|emb|CBL44726.1| Flagellar basal-body rod protein FlgC [gamma proteobacterium HdN1] Length = 145 Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N + EM MI ++ F + +++ ++ + + Sbjct: 100 GYVAYPNVNVVEEMTNMISASRSFQTNADVMNSAKQMLSAVLN 142 Score = 37.5 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 22/58 (37%), Gaps = 6/58 (10%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56 F+I + A RL+T + N++N ++V +R F A + Sbjct: 7 FDIAGSGMSAQTVRLNTTSSNIANAESVASSVDKTYRARHPVFMAQYTAALGNRPTDP 64 >gi|309779445|ref|ZP_07674206.1| flagellar basal-body rod protein FlgC [Ralstonia sp. 5_7_47FAA] gi|308921686|gb|EFP67322.1| flagellar basal-body rod protein FlgC [Ralstonia sp. 5_7_47FAA] Length = 135 Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 20/43 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N + + EM MI ++ + + + + + +A+ Sbjct: 90 GYVTMPNVDVVDEMVNMISASRSYQANVEVANTTKTMASKALT 132 Score = 38.3 bits (87), Expect = 0.86, Method: Composition-based stats. Identities = 15/86 (17%), Positives = 31/86 (36%), Gaps = 8/86 (9%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSEVVGAIKNDIDQKI 56 ++ +A A +R++ VA N++N G +R +V FS +D + Sbjct: 5 KVMDVAGSALTAQSKRMNVVASNLANAESVTGPDGKAYRAKQVVFS--PAQESDDYATGV 62 Query: 57 SFVASGKEYLSKEVGSFISTGTELDF 82 S ++ ++ D Sbjct: 63 SVDRVVEDTVTPMKRMHQPGNPLADA 88 >gi|254443396|ref|ZP_05056872.1| flagellar basal-body rod protein FlgC [Verrucomicrobiae bacterium DG1235] gi|198257704|gb|EDY82012.1| flagellar basal-body rod protein FlgC [Verrucomicrobiae bacterium DG1235] Length = 123 Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 31/75 (41%), Gaps = 6/75 (8%) Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSIT 224 + V E +G P P D G ++ N N +EM +I ++ + + Sbjct: 51 NVRDVVTDETNGPLVFNPGHPDADEK------GMVQLPNVNLTHEMVDLISASRSYEANL 104 Query: 225 TLIDENEKSMLEAIR 239 ++ +++ +A+R Sbjct: 105 QVVRTSKQMAQQALR 119 >gi|222099583|ref|YP_002534151.1| Flagellar hook-associated protein 1 [Thermotoga neapolitana DSM 4359] gi|221571973|gb|ACM22785.1| Flagellar hook-associated protein 1 [Thermotoga neapolitana DSM 4359] Length = 860 Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 10/63 (15%), Positives = 20/63 (31%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M N L + ++ V N++N +T G+ + + Q + Sbjct: 8 MFGILNTALTGIYTHKLAMNVVGHNIANANTPGYSRQRPVIEATPPIPLTTLTQPSIPLQ 67 Query: 61 SGK 63 G Sbjct: 68 MGT 70 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 7/39 (17%), Positives = 15/39 (38%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 + EM MI F++ +I ++ + I + Sbjct: 822 VSLDEEMANMIEYQHAFSAAAKVISTVDEMIQTVINMVR 860 >gi|255264378|ref|ZP_05343720.1| flagellar basal-body rod protein FlgC [Thalassiobium sp. R2A62] gi|255106713|gb|EET49387.1| flagellar basal-body rod protein FlgC [Thalassiobium sp. R2A62] Length = 130 Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 22/50 (44%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 S I + A RL ++N++N DT G+R F +V ++ Sbjct: 6 NSLAISASGMAAQTDRLRFTSENIANADTPGYRRKTTSFEAIVEQGQSTG 55 Score = 37.2 bits (84), Expect = 1.9, Method: Composition-based stats. Identities = 4/48 (8%), Positives = 19/48 (39%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G+ + +N + + E+ + + + + D++ + + + Sbjct: 82 ASGYYQGTNVDLLIEIADAREAQRSYEANLKMFDQSRQMSSSLMELLR 129 >gi|313895777|ref|ZP_07829331.1| flagellar basal-body rod protein FlgB [Selenomonas sp. oral taxon 137 str. F0430] gi|320529388|ref|ZP_08030476.1| flagellar basal-body rod protein FlgB [Selenomonas artemidis F0399] gi|312975202|gb|EFR40663.1| flagellar basal-body rod protein FlgB [Selenomonas sp. oral taxon 137 str. F0430] gi|320138354|gb|EFW30248.1| flagellar basal-body rod protein FlgB [Selenomonas artemidis F0399] Length = 140 Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 31/75 (41%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 ++ +IG A A R +++N++N +T FR V+F +++ + + V Sbjct: 9 STLDIGSRALAAASLRHEVLSNNIANVNTPNFRRSHVRFEDLLQKELGLAEDPLMKVVRT 68 Query: 63 KEYLSKEVGSFISTG 77 + + G Sbjct: 69 HDRHFPLAFRGKAHG 83 >gi|225375212|ref|ZP_03752433.1| hypothetical protein ROSEINA2194_00837 [Roseburia inulinivorans DSM 16841] gi|225212879|gb|EEG95233.1| hypothetical protein ROSEINA2194_00837 [Roseburia inulinivorans DSM 16841] Length = 594 Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 22/54 (40%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS 57 S IG + + L+T ++N++N +T G+ +V + N Sbjct: 7 SLYIGASGLQNSQNALNTTSNNLANVNTKGYVRQQVLQVDRNYTTFNTTASISQ 60 Score = 42.2 bits (97), Expect = 0.072, Method: Composition-based stats. Identities = 8/40 (20%), Positives = 18/40 (45%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 +S E+ +MI +N+ + I+ + + I + S Sbjct: 555 VSSDEELTKMIKFQNAYNASSRFINVVNEMIESMITQLGS 594 >gi|297520377|ref|ZP_06938763.1| flagellar basal body rod protein FlgC [Escherichia coli OP50] Length = 103 Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 6/43 (13%), Positives = 22/43 (51%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G+++ N + + EM + ++ + + +++ + ML+ + Sbjct: 58 GYVKMPNVDVVGEMVNTMSASRSYQANVEVLNTVKSMMLKTLT 100 >gi|332296506|ref|YP_004438429.1| flagellar basal-body rod protein FlgC [Thermodesulfobium narugense DSM 14796] gi|332179609|gb|AEE15298.1| flagellar basal-body rod protein FlgC [Thermodesulfobium narugense DSM 14796] Length = 134 Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 7/45 (15%), Positives = 23/45 (51%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 G++E N N + EM +I+ ++ + + ++ + + + + + Sbjct: 89 GYVEYPNVNPIREMVSLINASRSYEADLNVVSATKSMIGQTLDEL 133 Score = 43.7 bits (101), Expect = 0.023, Method: Composition-based stats. Identities = 13/82 (15%), Positives = 27/82 (32%), Gaps = 7/82 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-----DTVG--FRTIKVKFSEVVGAIKNDIDQ 54 + I + A ++ A+N++N D G F+ V+ E G + + Sbjct: 3 LRTLEIAGSGLTAQRLKMDVAANNLANAYSNVKDKNGQIFKRQIVELQESTGKDGSFLGV 62 Query: 55 KISFVASGKEYLSKEVGSFIST 76 K++ + S Sbjct: 63 KVAGIISDNSPPRMVYDPGNPE 84 >gi|46202330|ref|ZP_00053401.2| COG1749: Flagellar hook protein FlgE [Magnetospirillum magnetotacticum MS-1] Length = 205 Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 50/150 (33%), Gaps = 28/150 (18%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA--------------IKNDIDQKIS 57 +++ + +++ N++N +T G++ F V+ I Sbjct: 1 MQSMDWAMGSISQNIANVNTTGYKEKDTLFKTVLSESHTAPASTQNSPNKNTATTGLDIF 60 Query: 58 FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG-----------IILTRDGRF 106 V + L + G+ S+ T D A+ G +F + P + TR G F Sbjct: 61 GVRAVDRNLITKSGTITSSTTWSDMAINGRGFFIVTQPDSTGAPGAGGTSGTLYTRAGDF 120 Query: 107 KV---TDDGSLVSASGKYPVLDMASVPIQI 133 + +A G Y + A I Sbjct: 121 TQRAVNGNNYFTTADGNYLMGWAADSKGVI 150 >gi|294501824|ref|YP_003565524.1| flagellar hook-associated protein FlgK [Bacillus megaterium QM B1551] gi|294351761|gb|ADE72090.1| flagellar hook-associated protein FlgK [Bacillus megaterium QM B1551] Length = 507 Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 12/82 (14%), Positives = 31/82 (37%), Gaps = 6/82 (7%) Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLED-----SNANSMYEMGQMIHLTQKFN 221 GF + +S + + T+ +G +E S + EM MI +N Sbjct: 424 DGFYQSVIGQMSVDAQQANRLKSNSETL-QGAVEQRRQSTSAVSLDEEMTNMIQFQHAYN 482 Query: 222 SITTLIDENEKSMLEAIRNIAS 243 + ++ ++ + + + + + Sbjct: 483 ASARMVTMIDEMLDKIVNGLGT 504 Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 13/89 (14%), Positives = 25/89 (28%), Gaps = 3/89 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDIDQKISFVA 60 + A + L T+ N+SN +T G+ +V F N Sbjct: 7 GLQVAKRGMDAQQAALYTIGHNVSNANTPGYTRQRVSLETFPAYPAPGMNQTGTAGQIGM 66 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAW 89 + + + D ++ W Sbjct: 67 GVEASTVERIRDTFLDTQYRDETIKVGYW 95 >gi|149195179|ref|ZP_01872270.1| flagellar basal-body rod protein C [Caminibacter mediatlanticus TB-2] gi|149134731|gb|EDM23216.1| flagellar basal-body rod protein C [Caminibacter mediatlanticus TB-2] Length = 165 Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 9/47 (19%), Positives = 19/47 (40%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G++ N N + EM +I T+ + + + AI + + Sbjct: 119 GYVAYPNINPVIEMADLIEATRSYQANVAAFQSAKNMAQSAINILQA 165 Score = 43.7 bits (101), Expect = 0.023, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 24/49 (48%), Gaps = 6/49 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44 SF+I A R++ +++N++N +T G +R +V F + Sbjct: 4 LNSFDISGYGLSAQRFRINIISENIANANTTRTPEGGPYRRKEVIFKAI 52 >gi|332092853|gb|EGI97921.1| flagellar basal-body rod protein flgF [Shigella dysenteriae 155-74] Length = 111 Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 35/113 (30%), Gaps = 2/113 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + + A N++N GFR V ++ + V Sbjct: 1 MDHAIYTAMGAASQTLNQQAVTASNLANASMPGFRAQLNALRAV--PVEGLSLPTRTLVT 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113 + G T LD AL+ D W + F++ G+ Sbjct: 59 ASTPGADMTPGKMDYTSRPLDVALQQDGWPCRPLTAAKGIRVMAAFRLIPPGN 111 >gi|120554039|ref|YP_958390.1| flagellar hook-associated protein FlgK [Marinobacter aquaeolei VT8] gi|120323888|gb|ABM18203.1| flagellar hook-associated protein FlgK [Marinobacter aquaeolei VT8] Length = 688 Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 18/88 (20%), Positives = 34/88 (38%), Gaps = 3/88 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M IGL+ L + L+T A+N++N +T G+ +V+F Sbjct: 1 MAGLIGIGLSGVLGYQAALNTTANNITNANTPGYSRQEVQFET---QEGRRTGAGTIGSG 57 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDA 88 + + +++S D L G+ Sbjct: 58 VSVADIRRLADAYLSQQLREDSTLFGEQ 85 >gi|117923583|ref|YP_864200.1| flagellar basal-body rod protein FlgC [Magnetococcus sp. MC-1] gi|117607339|gb|ABK42794.1| flagellar basal-body rod protein FlgC [Magnetococcus sp. MC-1] Length = 141 Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 25/42 (59%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N + M EM M+ ++ + + ++++ +++ L+A+ Sbjct: 96 GYVAMPNIDVMTEMVNMMSASRSYEANVSVLNASKQMALKAL 137 Score = 41.4 bits (95), Expect = 0.097, Method: Composition-based stats. Identities = 11/122 (9%), Positives = 39/122 (31%), Gaps = 13/122 (10%) Query: 1 MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVK-----FSEVVGA 47 M TSF + + A R++ +++N++N T G ++ F + + Sbjct: 1 MDFLTSFKVTASGLAAQRLRMNIISENVANAQTTRTPEGGPYKRRDPVFMSRPFQDYLTR 60 Query: 48 IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107 ++ ++ ++ + + + + +++ ++ Sbjct: 61 EESAGATGVAVDRVNVDHRPPRLQYDPNHPDANADGYVAMPNIDVMTEMVNMMSASRSYE 120 Query: 108 VT 109 Sbjct: 121 AN 122 >gi|255099413|ref|ZP_05328390.1| flagellar basal-body rod protein [Clostridium difficile QCD-63q42] Length = 134 Score = 54.5 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 10/46 (21%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G++E N N + EM +I ++ ++S ++ + + +A+ I Sbjct: 89 GYVEYPNVNILVEMTDLITASRAYDSNVDTLNAQKSMISKAL-EIG 133 Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 17/113 (15%), Positives = 34/113 (30%), Gaps = 6/113 (5%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKI 56 + I + A ++ ++ N++N + +R V F E + K+ Sbjct: 5 SGMRISASGLTAESLKMDIISSNVANINATRGPNGEAYRRKVVSFEENYDNKLGMLGVKV 64 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109 + V K L K + + +E I +R V Sbjct: 65 TSVEDDKSPLKKVYDPSHPDAKPNGYVEYPNVNILVEMTDLITASRAYDSNVD 117 >gi|281412143|ref|YP_003346222.1| flagellar hook-associated protein FlgK [Thermotoga naphthophila RKU-10] gi|281373246|gb|ADA66808.1| flagellar hook-associated protein FlgK [Thermotoga naphthophila RKU-10] Length = 858 Score = 54.1 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 16/43 (37%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 M N L A + ++ V N++N T G+ + Sbjct: 6 MFGILNTALTGIHAHKLAMNVVGHNIANASTPGYSRQRPVIEA 48 Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 7/39 (17%), Positives = 15/39 (38%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 + EM MI F++ +I ++ + I + Sbjct: 820 VSLDEEMANMIKYQHAFSAAAKVITAVDQMIQTVINMVG 858 >gi|307731365|ref|YP_003908589.1| flagellar basal-body rod protein FlgC [Burkholderia sp. CCGE1003] gi|307585900|gb|ADN59298.1| flagellar basal-body rod protein FlgC [Burkholderia sp. CCGE1003] Length = 141 Score = 54.1 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 10/61 (16%), Positives = 25/61 (40%) Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 P T + + G++ N + + EM MI ++ + + ++ + ML+ + Sbjct: 78 PTPMKTAYDPGNPAANADGYVTLPNVDPVQEMVNMISASRSYQANVETLNTAKTLMLKTL 137 Query: 239 R 239 Sbjct: 138 T 138 Score = 42.9 bits (99), Expect = 0.036, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 6/47 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42 F + +A A QRL+ A N++N T G ++ +V F+ Sbjct: 5 MNIFGVAGSAMSAQSQRLNVTASNLANADSTTGPDGQPYKAKQVVFA 51 >gi|148976392|ref|ZP_01813098.1| flagellar basal-body rod protein C [Vibrionales bacterium SWAT-3] gi|145964215|gb|EDK29471.1| flagellar basal-body rod protein C [Vibrionales bacterium SWAT-3] Length = 137 Score = 54.1 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 24/43 (55%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 GF+ SN N M EM MI ++ + + + D +++ +L ++ Sbjct: 92 GFIYKSNVNVMEEMANMISASRAYQTNVQVADSSKQMLLRTLQ 134 Score = 36.0 bits (81), Expect = 5.2, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 27/81 (33%), Gaps = 6/81 (7%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56 FN+ +A A RL+T + N++N D+V ++ F + +N Sbjct: 5 NVFNVTGSAMSAESVRLNTTSSNLANADSVSSSAKETYKARHAVFGAELNRARNSDHTVP 64 Query: 57 SFVASGKEYLSKEVGSFISTG 77 V E + Sbjct: 65 VKVLGIVESDKPLSAEYNPDH 85 >gi|91785636|ref|YP_560842.1| flagellar basal body rod protein FlgC [Burkholderia xenovorans LB400] gi|296157458|ref|ZP_06840293.1| flagellar basal-body rod protein FlgC [Burkholderia sp. Ch1-1] gi|91689590|gb|ABE32790.1| Flagellar basal-body rod protein FlgC [Burkholderia xenovorans LB400] gi|295892230|gb|EFG72013.1| flagellar basal-body rod protein FlgC [Burkholderia sp. Ch1-1] Length = 141 Score = 54.1 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 10/61 (16%), Positives = 25/61 (40%) Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 P T + + G++ N + + EM MI ++ + + ++ + ML+ + Sbjct: 78 PTPMKTAYDPGNPAANADGYVTLPNVDPVQEMVNMISASRSYQANVETLNTAKTLMLKTL 137 Query: 239 R 239 Sbjct: 138 T 138 Score = 42.9 bits (99), Expect = 0.038, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 6/47 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42 F + +A A QRL+ A N++N T G ++ +V F+ Sbjct: 5 MNIFGVAGSAMSAQSQRLNVTASNLANADSTTGPDGQPYKAKQVVFA 51 >gi|328958286|ref|YP_004375672.1| flagellar basal body rod protein FlgC [Carnobacterium sp. 17-4] gi|328674610|gb|AEB30656.1| flagellar basal body rod protein FlgC [Carnobacterium sp. 17-4] Length = 145 Score = 54.1 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 25/43 (58%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G+++ N N EM M+ + +++ T ++ +++ + +A++ Sbjct: 99 GYVQMPNVNMADEMIDMMTTLRTYDANVTAMNASKEMLTKALQ 141 Score = 38.7 bits (88), Expect = 0.66, Method: Composition-based stats. Identities = 11/60 (18%), Positives = 24/60 (40%), Gaps = 7/60 (11%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTV----G---FRTIKVKFSEVVGAIKNDIDQKI 56 S I + +L T++ N++N +T G + +V F E ++ + + Sbjct: 6 SMQINASGLSLERLKLDTISTNIANVNTTRTEDGEGPYLKKEVVFEESFKQVETSLAGQG 65 >gi|148269976|ref|YP_001244436.1| flagellar hook-associated protein FlgK [Thermotoga petrophila RKU-1] gi|147735520|gb|ABQ46860.1| flagellar hook-associated protein FlgK [Thermotoga petrophila RKU-1] Length = 858 Score = 54.1 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 16/43 (37%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 M N L A + ++ V N++N T G+ + Sbjct: 6 MFGILNTALTGIHAHKLAMNVVGHNIANASTPGYSRQRPVIEA 48 Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 7/39 (17%), Positives = 15/39 (38%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 + EM MI F++ +I ++ + I + Sbjct: 820 VSLDEEMANMIKYQHAFSAAAKVITAVDQMIQTVINMVG 858 >gi|52080221|ref|YP_079012.1| flagellar basal body rod protein FlgC [Bacillus licheniformis ATCC 14580] gi|52785598|ref|YP_091427.1| flagellar basal body rod protein FlgC [Bacillus licheniformis ATCC 14580] gi|319646000|ref|ZP_08000230.1| flagellar basal-body rod protein [Bacillus sp. BT1B_CT2] gi|52003432|gb|AAU23374.1| flagellar basal-body rod protein [Bacillus licheniformis ATCC 14580] gi|52348100|gb|AAU40734.1| FlgC [Bacillus licheniformis ATCC 14580] gi|317391750|gb|EFV72547.1| flagellar basal-body rod protein [Bacillus sp. BT1B_CT2] Length = 150 Score = 54.1 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 7/42 (16%), Positives = 24/42 (57%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G+++ N + + EM ++ T+ + + T ++ + +++A+ Sbjct: 105 GYVQMPNVDPLKEMVDLMSSTRSYEANVTAMNATKGMLMKAL 146 Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 26/114 (22%), Positives = 38/114 (33%), Gaps = 17/114 (14%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV------G----FRTIKV-------KFSEVV 45 S NI +A A R+ TV+ N++N DT G +R V FS V+ Sbjct: 5 NSINISASALTAQRVRMDTVSSNLANMDTTRAKLVDGQWQPYRRKLVSTAPKGESFSSVL 64 Query: 46 GAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 + N + V K K + T D +G P + Sbjct: 65 QSSMNASARVGEGVKVTKISEDKTPFKLVYDPTHPDANEDGYVQMPNVDPLKEM 118 >gi|330502732|ref|YP_004379601.1| flagellar basal body rod protein FlgC [Pseudomonas mendocina NK-01] gi|328917018|gb|AEB57849.1| flagellar basal body rod protein FlgC [Pseudomonas mendocina NK-01] Length = 147 Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N + EM MI ++ F + +++ ++ + + Sbjct: 102 GYVYYPNVNVVEEMADMISASRAFQTNVEMMNTAKQMLQRVLT 144 Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 6/53 (11%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKND 51 FNI A RL+T++ N++N +TV +R F+ V + Sbjct: 7 FNIAGTGMSAQSTRLNTISSNIANAETVSSSLDQTYRARHPVFATVFQQAQGG 59 >gi|311280019|ref|YP_003942250.1| flagellar basal-body rod protein FlgC [Enterobacter cloacae SCF1] gi|308749214|gb|ADO48966.1| flagellar basal-body rod protein FlgC [Enterobacter cloacae SCF1] Length = 134 Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 6/43 (13%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N + + EM + ++ + + +++ + ML+ + Sbjct: 89 GYVRMPNVDVVGEMVNTMSASRSYQANVEVLNTVKSMMLKTLT 131 Score = 38.3 bits (87), Expect = 1.0, Method: Composition-based stats. Identities = 14/105 (13%), Positives = 29/105 (27%), Gaps = 7/105 (6%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS-EVVGAIKNDIDQ 54 + F++ +A A +RL+ A N++N G +R +V F + + Sbjct: 4 LSIFDVAGSALTAQSKRLNVAASNLANADSVTGPDGQPYRAKQVVFQVDAPIGAATGGVK 63 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 + V S + + Sbjct: 64 VANVVESQAPDKLVFQPGNPLADAKGYVRMPNVDVVGEMVNTMSA 108 >gi|254519436|ref|ZP_05131492.1| flagellar hook-associated protein 1 [Clostridium sp. 7_2_43FAA] gi|226913185|gb|EEH98386.1| flagellar hook-associated protein 1 [Clostridium sp. 7_2_43FAA] Length = 611 Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 33/98 (33%), Gaps = 2/98 (2%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 ++FNI ++ + + N++N++TVG+ + K S A Sbjct: 6 STFNIAKRGMNVQQKSIDVTSHNIANSNTVGYSRQRAKIET--SRPFGGTSMGSSVQAGQ 63 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL 100 ++ LD+ + G++ + Sbjct: 64 LGTGAQIRAIERVRDNFLDYQVRGESAVLGKYDIRNNF 101 Score = 44.5 bits (103), Expect = 0.013, Method: Composition-based stats. Identities = 6/40 (15%), Positives = 16/40 (40%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 S + EM ++ +N+ +I ++ + I + Sbjct: 570 SGVSLDEEMANLVQFQHAYNANAKIISTVDELLEVIINGL 609 >gi|170288661|ref|YP_001738899.1| flagellar hook-associated protein FlgK [Thermotoga sp. RQ2] gi|170176164|gb|ACB09216.1| flagellar hook-associated protein FlgK [Thermotoga sp. RQ2] Length = 858 Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 16/43 (37%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 M N L A + ++ V N++N T G+ + Sbjct: 6 MFGILNTALTGIHAHKLAMNVVGHNIANASTPGYSRQRPVIEA 48 Score = 51.8 bits (122), Expect = 8e-05, Method: Composition-based stats. Identities = 7/39 (17%), Positives = 15/39 (38%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 + EM MI F++ +I ++ + I + Sbjct: 820 VSLDEEMANMIEYQHAFSAAAKVITAVDQMIQTVINMVG 858 >gi|149182549|ref|ZP_01861021.1| flagellar hook-associated protein [Bacillus sp. SG-1] gi|148849741|gb|EDL63919.1| flagellar hook-associated protein [Bacillus sp. SG-1] Length = 529 Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 11/90 (12%), Positives = 32/90 (35%), Gaps = 6/90 (6%) Query: 159 GLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLE-----DSNANSMYEMGQM 213 + + + G++ + + T+++ +E S + EM M Sbjct: 438 QNSQMANFRNYYEVLIGGMAVDAQNAVRLTDNSATLRQ-AVEERRMSTSAVSLDEEMTNM 496 Query: 214 IHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 I +N+ +I ++ + + I + + Sbjct: 497 IQYQHAYNASARMISLQDELLDKIINGMGT 526 Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 7/41 (17%), Positives = 15/41 (36%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 + L N++N +T+GF ++ F + Sbjct: 6 QGLETARRGMYTQQSALQVTGHNVANANTLGFTRQRINFEQ 46 >gi|312135856|ref|YP_004003194.1| flagellar basal-body rod protein flgc [Caldicellulosiruptor owensensis OL] gi|311775907|gb|ADQ05394.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor owensensis OL] Length = 145 Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 14/103 (13%), Positives = 34/103 (33%) Query: 135 QKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTV 194 Q V + +++ S G VR + P+ + Sbjct: 38 QPYRRKIVVFEERKQNFSQILNQKIEQIQASSSGGVRVKAILEDPSPFKKVYDPTHPDAD 97 Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + G++ N + + EM MI ++ + + T ++ + + Sbjct: 98 QNGYVNYPNVDIVTEMVNMIEASRSYEANVTALNITKSMITRT 140 Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 6/49 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43 M + NI +A A R+ +A N++N +T G +R V F E Sbjct: 1 MFDAINISSSALTAQRVRMDVIAQNIANANTTRTENGQPYRRKIVVFEE 49 >gi|209521587|ref|ZP_03270285.1| flagellar basal-body rod protein FlgC [Burkholderia sp. H160] gi|209497970|gb|EDZ98127.1| flagellar basal-body rod protein FlgC [Burkholderia sp. H160] Length = 141 Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 11/61 (18%), Positives = 26/61 (42%) Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 P+ T E + G++ N + + EM MI ++ + + ++ + ML+ + Sbjct: 78 PSPMKTAYEPGNPAANADGYVTLPNVDPVQEMVNMISASRSYQANVETLNTAKTLMLKTL 137 Query: 239 R 239 Sbjct: 138 T 138 Score = 42.5 bits (98), Expect = 0.055, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 6/47 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42 F + +A A +RL+ A N++N T G ++ +V F+ Sbjct: 5 MNIFGVAGSAMSAQSERLNVTASNLANADSTTGPDGQPYKAKQVVFA 51 >gi|126668564|ref|ZP_01739518.1| flagellar hook-associated protein [Marinobacter sp. ELB17] gi|126626969|gb|EAZ97612.1| flagellar hook-associated protein [Marinobacter sp. ELB17] Length = 668 Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 35/88 (39%), Gaps = 3/88 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M IGL+ L + L+T A+N++N +T G+ V+F Sbjct: 1 MAGLLGIGLSGILGSQAALNTTANNITNANTPGYSRQDVQFG---AQTPQRTGAGSIGTG 57 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDA 88 E + + +++ D +LEG+ Sbjct: 58 VNVENIRRLANEYLTQQIREDSSLEGEQ 85 >gi|88858145|ref|ZP_01132787.1| flagellar biosynthesis; cell-proximal portion of basal-body rod [Pseudoalteromonas tunicata D2] gi|88819762|gb|EAR29575.1| flagellar biosynthesis; cell-proximal portion of basal-body rod [Pseudoalteromonas tunicata D2] Length = 140 Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 21/42 (50%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 GF+ SN N + EM MI ++ + + L D + + + I Sbjct: 94 GFIYKSNVNVVEEMANMISASRAYQTNVQLADAAKSMLSKTI 135 Score = 37.5 bits (85), Expect = 1.8, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 30/95 (31%), Gaps = 8/95 (8%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56 F+I A RL+T A NMSN ++V +R F+ + K Q+ Sbjct: 5 NVFDISATGMSAQSVRLNTTASNMSNANSVSSSIDQTYRARHPVFAAEL--TKAAASQQG 62 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA 91 V + + + D + Sbjct: 63 ESVGVKVLGIVESDKPLQIEFNPTHPMADKDGFIY 97 >gi|302342345|ref|YP_003806874.1| flagellar basal-body rod protein FlgC [Desulfarculus baarsii DSM 2075] gi|301638958|gb|ADK84280.1| flagellar basal-body rod protein FlgC [Desulfarculus baarsii DSM 2075] Length = 147 Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 22/42 (52%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N + + EM +I T+ + + + + ++ L+A+ Sbjct: 102 GYVLYPNVDVVTEMVNLISATRSYEANVSAVGASKNMALKAL 143 Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 2/34 (5%) Query: 1 MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTV 32 M TS I + A RL+ ++ N++N +T Sbjct: 1 MDFVTSMEISASGLSAQRTRLNIISQNLANAETT 34 >gi|90408058|ref|ZP_01216229.1| flagellar basal-body rod protein FlgC [Psychromonas sp. CNPT3] gi|90310815|gb|EAS38929.1| flagellar basal-body rod protein FlgC [Psychromonas sp. CNPT3] Length = 140 Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 22/43 (51%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 GF+ SN N M EM MI ++ + + + D ++ + ++ Sbjct: 94 GFVYHSNVNVMEEMANMISASRSYQTNVQIADAAKQMLSRTLQ 136 Score = 41.4 bits (95), Expect = 0.10, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 22/66 (33%), Gaps = 10/66 (15%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTD--------TVGFRTIKVKFSEVVGAIKNDIDQ 54 +I A RL+T A N++N + T +R F+ + K + Sbjct: 5 RILDISATGMSAQSVRLNTTASNLANANSVSSSSEKT--YRARHPVFAAELNKAKGALSS 62 Query: 55 KISFVA 60 V Sbjct: 63 SGVGVK 68 >gi|89902475|ref|YP_524946.1| flagellar basal-body rod protein FlgC [Rhodoferax ferrireducens T118] gi|89347212|gb|ABD71415.1| flagellar basal-body rod protein FlgC [Rhodoferax ferrireducens T118] Length = 134 Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 24/43 (55%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ SN N + EM MI ++ + + +++ + +L+ ++ Sbjct: 89 GYVTQSNVNPIEEMVNMISASRSYQNNVEVMNTAKTLLLKTLQ 131 Score = 42.2 bits (97), Expect = 0.061, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 6/50 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEV 44 M + FN+ +A A QRL+ VA N++N D V G++ +V F V Sbjct: 3 MFSIFNVSGSAISAQSQRLNVVASNLANADAVAGPDGQGYKGRQVVFETV 52 >gi|73539448|ref|YP_299815.1| flagellar basal-body rod protein FlgC [Ralstonia eutropha JMP134] gi|72122785|gb|AAZ64971.1| Flagellar basal-body rod protein FlgC [Ralstonia eutropha JMP134] Length = 135 Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 37/96 (38%) Query: 144 EKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSN 203 G+ + +VI M G V+ + P+ P + G++ N Sbjct: 37 PDGQAYRTKQVIFGMAPTPGQSDVGGVQVQGVMEDPSPPRMVHNPTHPMANAEGYVVMPN 96 Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 N + EM MI ++ + + +++ + ML+ + Sbjct: 97 VNPVEEMVNMISASRSYQANVEVLNSAKNMMLKTLT 132 Score = 37.2 bits (84), Expect = 2.3, Method: Composition-based stats. Identities = 19/109 (17%), Positives = 38/109 (34%), Gaps = 7/109 (6%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQ- 54 F++ +A A QR++ A N++N D+V +RT +V F ++D+ Sbjct: 4 MNIFDVAGSAMAAQSQRMNVTASNLANADSVVSPDGQAYRTKQVIFGMAPTPGQSDVGGV 63 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103 ++ V + + + E I +R Sbjct: 64 QVQGVMEDPSPPRMVHNPTHPMANAEGYVVMPNVNPVEEMVNMISASRS 112 >gi|254973892|ref|ZP_05270364.1| putative flagellar hook-associated protein [Clostridium difficile QCD-66c26] gi|255091277|ref|ZP_05320755.1| putative flagellar hook-associated protein [Clostridium difficile CIP 107932] gi|255312936|ref|ZP_05354519.1| putative flagellar hook-associated protein [Clostridium difficile QCD-76w55] gi|255515695|ref|ZP_05383371.1| putative flagellar hook-associated protein [Clostridium difficile QCD-97b34] gi|255648789|ref|ZP_05395691.1| putative flagellar hook-associated protein [Clostridium difficile QCD-37x79] gi|260682009|ref|YP_003213294.1| putative flagellar hook-associated protein [Clostridium difficile CD196] gi|260685607|ref|YP_003216740.1| putative flagellar hook-associated protein [Clostridium difficile R20291] gi|260208172|emb|CBA60493.1| putative flagellar hook-associated protein [Clostridium difficile CD196] gi|260211623|emb|CBE01861.1| putative flagellar hook-associated protein [Clostridium difficile R20291] Length = 436 Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 22/41 (53%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 + N + A ++ + T++ N+SN DT G+ + +F+ Sbjct: 6 SILNTANSGMNAHQKAIQTISHNISNLDTDGYSRQRTEFAT 46 Score = 49.9 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 6/40 (15%), Positives = 17/40 (42%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 S + EM ++I + + + + ++ + + I I Sbjct: 396 SGVSLDEEMTELIKIQRSYQASAKVMSTAVQLLDVVINGI 435 >gi|146307871|ref|YP_001188336.1| flagellar basal body rod protein FlgC [Pseudomonas mendocina ymp] gi|145576072|gb|ABP85604.1| flagellar basal-body rod protein FlgC [Pseudomonas mendocina ymp] Length = 147 Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N + EM MI ++ F + +++ ++ + + Sbjct: 102 GYVYYPNVNVVEEMADMISASRAFQTNVEMMNTAKQMLQRVLT 144 Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 6/53 (11%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKND 51 FNI A RL+T++ N++N +TV +R F+ V + Sbjct: 7 FNIAGTGMSAQSTRLNTISSNIANAETVSSSIDQTYRARHPVFATVFQQAQGG 59 >gi|17548564|ref|NP_521904.1| flagellar basal-body rod protein FlgC [Ralstonia solanacearum GMI1000] gi|300693335|ref|YP_003749308.1| flagellar basal-body rod protein flgc (proximal rod protein) [Ralstonia solanacearum PSI07] gi|17430812|emb|CAD17494.1| probable flagellar basal-body rod protein flgc [Ralstonia solanacearum GMI1000] gi|299075372|emb|CBJ34667.1| Flagellar basal-body rod protein flgC (proximal rod protein) [Ralstonia solanacearum PSI07] Length = 135 Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 20/43 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N + + EM MI ++ + + + + + +A+ Sbjct: 90 GYVTMPNVDVVDEMVNMISASRSYQANVEVANTTKTMAAKALT 132 Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 23/46 (50%), Gaps = 6/46 (13%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDT------VGFRTIKVKFS 42 ++ +A A +R++ VA N++N ++ +R +V FS Sbjct: 5 KVMDVAGSALTAQSKRMNVVASNLANAESVTGPDGTAYRAKQVVFS 50 >gi|295111496|emb|CBL28246.1| flagellar basal-body rod protein FlgC [Synergistetes bacterium SGP1] Length = 139 Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 9/65 (13%), Positives = 25/65 (38%) Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 P + K G++ N N + EM M+ ++ + + +++ + A+ Sbjct: 75 RTAPRMTYQPDHPDADKDGYVAYPNVNLVREMTDMLVASRAYEANLSVVTTAREMWNGAL 134 Query: 239 RNIAS 243 + + Sbjct: 135 EVMRA 139 Score = 49.5 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 10/82 (12%), Positives = 24/82 (29%), Gaps = 6/82 (7%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDIDQKIS 57 S + +A A + T++ N++N +T G ++ F+E++ Sbjct: 6 SMEVAGSALTAHRLWMDTISSNLANINTTRTLSGGPYKRRVPVFAEMLDRTIGGYRDIGG 65 Query: 58 FVASGKEYLSKEVGSFISTGTE 79 + Sbjct: 66 VRVTAITEDRTAPRMTYQPDHP 87 >gi|291520179|emb|CBK75400.1| Flagellar hook-associated protein [Butyrivibrio fibrisolvens 16/4] Length = 199 Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 13/77 (16%), Positives = 27/77 (35%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 S +G + + L+T A+N+SN +T G+ +V + + + G Sbjct: 7 SLYVGASGLQSASHGLNTTANNLSNINTEGYVREQVVYEDRNYQKIGTAAISTQYRGLGV 66 Query: 64 EYLSKEVGSFISTGTEL 80 + + I Sbjct: 67 QVGTIVHARDIFLDKAY 83 >gi|255598721|ref|XP_002537067.1| Flagellar basal-body rod protein flgC, putative [Ricinus communis] gi|223517602|gb|EEF25316.1| Flagellar basal-body rod protein flgC, putative [Ricinus communis] Length = 121 Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 20/43 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N EM MI ++ + + ++ + +L+ + Sbjct: 76 GYITMPNVNVTEEMVNMISASRAYQNNVETMNAAKTMLLKTLN 118 >gi|254476330|ref|ZP_05089716.1| flagellar basal-body rod protein FlgC [Ruegeria sp. R11] gi|214030573|gb|EEB71408.1| flagellar basal-body rod protein FlgC [Ruegeria sp. R11] Length = 130 Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 23/42 (54%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44 S +I +A A RL V++N+SN DT G+R V F V Sbjct: 6 KSLSISASALQAQSTRLRHVSENISNADTPGYRRKTVPFEAV 47 Score = 40.6 bits (93), Expect = 0.17, Method: Composition-based stats. Identities = 5/38 (13%), Positives = 15/38 (39%) Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 G + SN + M E+ + + + + ++ + Sbjct: 83 SGHYKGSNVDLMIEIADAREAQRSYEANLKMFEQGRQM 120 >gi|222100200|ref|YP_002534768.1| Flagellar basal-body rod protein FlgC [Thermotoga neapolitana DSM 4359] gi|221572590|gb|ACM23402.1| Flagellar basal-body rod protein FlgC [Thermotoga neapolitana DSM 4359] Length = 139 Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N + EM +I+ + +++ + + + A++ Sbjct: 93 GYVRMPNVNIVREMVDLINAQRAYDANVAAFNVTKNMVNSALQ 135 Score = 44.5 bits (103), Expect = 0.012, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 22/53 (41%), Gaps = 6/53 (11%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKND 51 NI A R+ V+ N++N +T G +R F+E + K+ Sbjct: 7 MNISATGMSAQRLRVEIVSTNIANAETTRTEMGEPYRRKVPVFAEYLRRAKDG 59 >gi|222529660|ref|YP_002573542.1| flagellar hook-associated protein FlgK [Caldicellulosiruptor bescii DSM 6725] gi|222456507|gb|ACM60769.1| flagellar hook-associated protein FlgK [Caldicellulosiruptor bescii DSM 6725] Length = 525 Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 20/192 (10%), Positives = 55/192 (28%), Gaps = 11/192 (5%) Query: 51 DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTD 110 I ++ + + L ++ + G L+ G +F + R + Sbjct: 341 GIPYYLNRLNEFAQKLIEKFNELHTQGWSLNGQNTGINFFEPPVGQTFFYARYIKVSDAI 400 Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170 L + + Y + + ++ N + + + ++ SQG Sbjct: 401 MNDLNNIATTYDASSLPGGNDLVVDMLKLRNDNSVFKEGKFEDFLKSLISNLGVDSQG-- 458 Query: 171 RRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + N + + G + EM +I F + +I+ Sbjct: 459 ---AKNFAENQKVMVTQLDNRRQAVSG------VSIDEEMTNLIKYQHGFQASARMINAF 509 Query: 231 EKSMLEAIRNIA 242 ++ + + + Sbjct: 510 DEMLDVIVNRLG 521 Score = 42.5 bits (98), Expect = 0.052, Method: Composition-based stats. Identities = 11/77 (14%), Positives = 21/77 (27%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 I + L + N++N T G+ + + K V G Sbjct: 5 GLEIARTGIFVNRKGLEVTSHNVANASTPGYTRQVLNVKSNPPSAKVGFYSPKFQVGLGA 64 Query: 64 EYLSKEVGSFISTGTEL 80 + S E + + Sbjct: 65 DVQSLEQIRDMFLDVQY 81 >gi|253990129|ref|YP_003041485.1| flagellar basal body rod protein FlgC [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|211639034|emb|CAR67648.1| flagellar basal-body rod protein flgc (putative proximal rod protein) [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253781579|emb|CAQ84742.1| flagellar basal-body rod protein flgc (putative proximal rod protein) [Photorhabdus asymbiotica] Length = 134 Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N + + EM I ++ + + +++ + ML+ + Sbjct: 89 GYVRMPNVDVVGEMINTISASRSYQANVEVLNTTKSLMLKTLT 131 Score = 39.9 bits (91), Expect = 0.33, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 31/101 (30%), Gaps = 7/101 (6%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFS-EVVGAIKNDIDQ 54 + F+I +A A QRL+ A NM+N D+V +R +V F + + Sbjct: 4 LSVFDIAGSALSAQSQRLNVSASNMANADSVAGPDGQPYRAKQVVFRVAAPAGQETGGVR 63 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP 95 V + + + + Sbjct: 64 VSEIVDDPTPFRLEYQPGHPLADEKGYVRMPNVDVVGEMIN 104 >gi|126697817|ref|YP_001086714.1| flagellar basal-body rod protein [Clostridium difficile 630] gi|254973910|ref|ZP_05270382.1| flagellar basal-body rod protein [Clostridium difficile QCD-66c26] gi|255091296|ref|ZP_05320774.1| flagellar basal-body rod protein [Clostridium difficile CIP 107932] gi|255305270|ref|ZP_05349442.1| flagellar basal-body rod protein [Clostridium difficile ATCC 43255] gi|255312954|ref|ZP_05354537.1| flagellar basal-body rod protein [Clostridium difficile QCD-76w55] gi|255515713|ref|ZP_05383389.1| flagellar basal-body rod protein [Clostridium difficile QCD-97b34] gi|255648807|ref|ZP_05395709.1| flagellar basal-body rod protein [Clostridium difficile QCD-37x79] gi|306518922|ref|ZP_07405269.1| flagellar basal body rod protein FlgC [Clostridium difficile QCD-32g58] gi|115249254|emb|CAJ67067.1| Flagellar basal-body rod protein FlgC [Clostridium difficile] Length = 134 Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 10/46 (21%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G++E N N + EM +I ++ ++S ++ + + +A+ I Sbjct: 89 GYVEYPNVNILVEMTDLITASRAYDSNVDTLNAQKSMISKAL-EIG 133 Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 16/113 (14%), Positives = 34/113 (30%), Gaps = 6/113 (5%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKI 56 + I + A ++ ++ N++N + +R V F E + K+ Sbjct: 5 SGMRISASGLTAESLKMDIISSNVANINATRGPNGEAYRRKVVSFEENYDNKLGMLGVKV 64 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109 + V K L + + + +E I +R V Sbjct: 65 TSVEDDKSPLKEVYDPSHPDAKPNGYVEYPNVNILVEMTDLITASRAYDSNVD 117 >gi|94312667|ref|YP_585876.1| flagellar basal body rod protein FlgC [Cupriavidus metallidurans CH34] gi|93356519|gb|ABF10607.1| flagellar basal body rod protein FlgC [Cupriavidus metallidurans CH34] Length = 135 Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 15/96 (15%), Positives = 33/96 (34%) Query: 144 EKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSN 203 G+ + +VI M G V+ + G++ N Sbjct: 37 PNGQPYRAKQVIFEMAPTPGQSDVGGVQVAGVMEDTAPARMVHNPSHPLADANGYVTMPN 96 Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 N + EM MI ++ + + +++ + ML+ + Sbjct: 97 VNPVEEMVNMISASRSYQANVEVLNTAKNMMLKTLT 132 Score = 36.0 bits (81), Expect = 5.0, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 28/58 (48%), Gaps = 6/58 (10%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDT----VG--FRTIKVKFSEVVGAIKNDID 53 + F++ +A A QR++ A N++N D+ G +R +V F ++D+ Sbjct: 4 MSIFDVAGSAMAAQSQRMNVTASNLANADSAVAPNGQPYRAKQVIFEMAPTPGQSDVG 61 >gi|118444436|ref|YP_877973.1| flagellar basal body rod protein FlgC [Clostridium novyi NT] gi|118134892|gb|ABK61936.1| flagellar basal-body rod protein FlgC [Clostridium novyi NT] Length = 145 Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 23/42 (54%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N N + EM MI T+ + + T I+ ++ ++A+ Sbjct: 100 GYVLMPNVNILNEMADMIAATRAYEANVTAINSSKNMFMKAL 141 Score = 36.0 bits (81), Expect = 5.1, Method: Composition-based stats. Identities = 8/30 (26%), Positives = 15/30 (50%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV 32 +S I + A R+ T++ N++N T Sbjct: 5 SSMRISASGLAAERLRMDTISSNITNFKTT 34 >gi|57167572|ref|ZP_00366712.1| flagellar basal-body rod protein FlgC [Campylobacter coli RM2228] gi|305433078|ref|ZP_07402234.1| flagellar basal-body rod protein FlgC [Campylobacter coli JV20] gi|57020694|gb|EAL57358.1| flagellar basal-body rod protein FlgC [Campylobacter coli RM2228] gi|304443779|gb|EFM36436.1| flagellar basal-body rod protein FlgC [Campylobacter coli JV20] Length = 164 Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 9/48 (18%), Positives = 20/48 (41%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 +G++ N N + EM +I T+ + + + + AI + Sbjct: 116 AQGYVAYPNVNPVIEMADLIEATRAYQANVSAFTSAKTIAQSAIDLLR 163 Score = 42.9 bits (99), Expect = 0.038, Method: Composition-based stats. Identities = 9/39 (23%), Positives = 18/39 (46%), Gaps = 6/39 (15%) Query: 11 AQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43 A R++ ++ N++N +T G +R +V F Sbjct: 13 GLSAQRFRMNVISSNIANANTTRTAEGGPYRRREVIFKA 51 >gi|323341388|ref|ZP_08081632.1| flagellar basal-body rod protein FlgC [Lactobacillus ruminis ATCC 25644] gi|323091265|gb|EFZ33893.1| flagellar basal-body rod protein FlgC [Lactobacillus ruminis ATCC 25644] Length = 139 Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++E N N EM MI + + + + + N+ + +A+ Sbjct: 93 GYVEMPNVNMADEMVDMIQAMRTYEANVSSTEANKNILKKAL 134 Score = 42.5 bits (98), Expect = 0.044, Method: Composition-based stats. Identities = 11/64 (17%), Positives = 23/64 (35%), Gaps = 6/64 (9%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDIDQKI 56 I + +L + N++N +T G ++ V+FSE + + Sbjct: 5 NGLQINASGLSLERMKLDVASTNIANVNTTRTAEGGPYKKKTVEFSENLRQAQGTNKITS 64 Query: 57 SFVA 60 + V Sbjct: 65 AGVK 68 >gi|149927804|ref|ZP_01916055.1| Flagellar hook-associated protein [Limnobacter sp. MED105] gi|149823426|gb|EDM82657.1| Flagellar hook-associated protein [Limnobacter sp. MED105] Length = 576 Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 30/87 (34%), Gaps = 1/87 (1%) Query: 1 MQTSFN-IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFV 59 M S I L+ A LST + N++N++TVGF +V + Sbjct: 1 MSNSVYGIALSGLNAARAGLSTTSHNIANSNTVGFNRQQVIQQSRPSTGSDIGYIGQGVD 60 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEG 86 + + + + + D A Sbjct: 61 IASVQRVYSDFINSQEQKATSDAAFYN 87 >gi|240145383|ref|ZP_04743984.1| flagellar hook-associated protein FlgK [Roseburia intestinalis L1-82] gi|257202504|gb|EEV00789.1| flagellar hook-associated protein FlgK [Roseburia intestinalis L1-82] Length = 587 Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 23/40 (57%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 S IG+A + + L+ ++N++N DT G+ V F++ Sbjct: 7 SMFIGVAGLQSSQNALNVTSNNLANLDTTGYVRQSVLFAD 46 Score = 37.5 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 7/39 (17%), Positives = 16/39 (41%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 +S E+ MI +N+ + I+ + + I + Sbjct: 549 VSSDEELTYMIKYQNAYNASSRFINVINEMIEHLITQLG 587 >gi|291539398|emb|CBL12509.1| flagellar hook-associated protein FlgK [Roseburia intestinalis XB6B4] Length = 587 Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 23/40 (57%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 S IG+A + + L+ ++N++N DT G+ V F++ Sbjct: 7 SMFIGVAGLQSSQNALNVTSNNLANLDTTGYVRQSVLFAD 46 Score = 37.5 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 7/39 (17%), Positives = 16/39 (41%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 +S E+ MI +N+ + I+ + + I + Sbjct: 549 VSSDEELTYMIKYQNAYNASSRFINVINEMIEHLITQLG 587 >gi|83747656|ref|ZP_00944692.1| FlgC [Ralstonia solanacearum UW551] gi|300696911|ref|YP_003747572.1| FlgC: flagellar basal-body rod protein [Ralstonia solanacearum CFBP2957] gi|83725708|gb|EAP72850.1| FlgC [Ralstonia solanacearum UW551] gi|299073635|emb|CBJ53155.1| FlgC: Flagellar basal-body rod protein [Ralstonia solanacearum CFBP2957] Length = 135 Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 20/43 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N + + EM MI ++ + + + + + +A+ Sbjct: 90 GYVTMPNVDVVDEMVNMISASRSYQANVEVANTTKTMAAKALT 132 Score = 39.1 bits (89), Expect = 0.59, Method: Composition-based stats. Identities = 15/85 (17%), Positives = 31/85 (36%), Gaps = 6/85 (7%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDT------VGFRTIKVKFSEVVGAIKNDIDQKI 56 ++ +A A +R++ VA N++N ++ +R +V FS G + Sbjct: 5 KVMDVAGSALTAQSKRMNVVASNLANAESVTGPDGTAYRAKQVVFSPEQGTDGYATGVSV 64 Query: 57 SFVASGKEYLSKEVGSFISTGTELD 81 V K + + + D Sbjct: 65 DGVVEDTVTPMKRMHQPGNPLADAD 89 >gi|312126817|ref|YP_003991691.1| flagellar basal-body rod protein flgc [Caldicellulosiruptor hydrothermalis 108] gi|311776836|gb|ADQ06322.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor hydrothermalis 108] Length = 147 Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 20/43 (46%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + G++ N + + EM MI ++ + + T ++ + + Sbjct: 100 QNGYVNYPNVDIVTEMVNMIEASRSYEANVTALNITKSMITRT 142 Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 6/49 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSE 43 M + NI +A A R+ +A N++N +T +R V F E Sbjct: 3 MFDAINISSSALTAQRVRMDVIAQNIANANTTKTENGQPYRRKVVVFEE 51 >gi|124268256|ref|YP_001022260.1| flagellar basal body rod protein [Methylibium petroleiphilum PM1] gi|124261031|gb|ABM96025.1| flagellar basal body rod protein [Methylibium petroleiphilum PM1] Length = 138 Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 25/43 (58%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ SN N++ EM MI ++ + + +++ + +L+ ++ Sbjct: 93 GYVTYSNVNAVEEMVNMISASRSYQNNIEVMNTAKTLLLKTLQ 135 Score = 49.9 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQ 54 M FN+ +A A QRL+ VA N++N DTV ++ +V F + + Sbjct: 3 MLNIFNVSGSAVSAQSQRLNVVASNLANADTVAGPDGKAYKARQVVFQTLPFQQPGEAGT 62 >gi|266621921|ref|ZP_06114856.1| flagellar basal-body rod protein FlgB [Clostridium hathewayi DSM 13479] gi|288866394|gb|EFC98692.1| flagellar basal-body rod protein FlgB [Clostridium hathewayi DSM 13479] Length = 118 Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 15/107 (14%), Positives = 29/107 (27%), Gaps = 12/107 (11%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69 + A+ + N++N +T GF+ KV+F +V+ + V Sbjct: 14 SGLDAMWLKQQVAGHNIANVETPGFKAKKVEFKQVLKEAADGSGPVYKAVVGTDNDTEAR 73 Query: 70 VGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVS 116 + + L T G L + Sbjct: 74 PDGNNVQVEKEELDL------------WKAYTEYSAMTSRMSGKLST 108 >gi|94987189|ref|YP_595122.1| flagellar hook-associated protein [Lawsonia intracellularis PHE/MN1-00] gi|94731438|emb|CAJ54801.1| Flagellar hook-associated protein [Lawsonia intracellularis PHE/MN1-00] Length = 705 Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 32/77 (41%), Gaps = 2/77 (2%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG--AIKNDIDQKISFV 59 T F IG +A + L+ +N++N +T G+ V+F + G + Q + Sbjct: 4 NTLFGIGKSAIAGNQTALNVTGNNIANVNTQGYSRQSVRFEDRYGLNQTPGMLGQGVHTA 63 Query: 60 ASGKEYLSKEVGSFIST 76 + + ++++ Sbjct: 64 EIYRNFNRFVEDAYLNR 80 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 18/158 (11%), Positives = 40/158 (25%), Gaps = 8/158 (5%) Query: 82 FALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFN 141 AL + +F + + D + + S+ ++ Sbjct: 553 AALGINTFFQGSDATDMAIKPDVIQNTNFINAGKVNANGEVSTGDNSIAKELADLATKEV 612 Query: 142 VGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLED 201 G + + A G V S +++ L Sbjct: 613 TISTGWETTHQTLGAYYG--------ALVGLVGSDTRTAKFNADYNKTLSNELEQQALSI 664 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + N EM Q+I + + LI ++ + + Sbjct: 665 TGVNLDEEMTQLIKFQHSYTAAAKLITTADQMLQTLLS 702 >gi|312792645|ref|YP_004025568.1| flagellar basal-body rod protein flgc [Caldicellulosiruptor kristjanssonii 177R1B] gi|312179785|gb|ADQ39955.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor kristjanssonii 177R1B] Length = 147 Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 20/43 (46%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + G++ N + + EM MI ++ + + T ++ + + Sbjct: 100 QNGYVNYPNVDIVTEMVNMIEASRSYEANVTALNITKSMITRT 142 Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 6/49 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43 M + NI +A A R+ +A N++N +T G +R V F E Sbjct: 3 MFDAINISSSALAAQRVRMDVIAQNIANANTTRTENGQPYRRKVVVFEE 51 >gi|269138588|ref|YP_003295288.1| flagellar hook-associated protein [Edwardsiella tarda EIB202] gi|267984248|gb|ACY84077.1| flagellar hook-associated protein [Edwardsiella tarda EIB202] Length = 546 Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 29/89 (32%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M N ++ A + L+ ++N++N T G+ V F+E G V Sbjct: 1 MANLINNAMSGLSAAQTALAVTSNNINNVYTAGYNRQTVSFAENNGTSTPAGFIGNGVVV 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAW 89 SG + + D A Sbjct: 61 SGINREYNQFIVNQLRQGQSDLATTSTYH 89 >gi|187925763|ref|YP_001897405.1| flagellar basal body rod protein FlgC [Burkholderia phytofirmans PsJN] gi|187716957|gb|ACD18181.1| flagellar basal-body rod protein FlgC [Burkholderia phytofirmans PsJN] Length = 141 Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 10/61 (16%), Positives = 25/61 (40%) Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 P T + + G++ N + + EM MI ++ + + ++ + ML+ + Sbjct: 78 PTPMKTAYDPGNPAANSDGYVTLPNVDPVQEMVNMISASRSYQANVETLNTAKTLMLKTL 137 Query: 239 R 239 Sbjct: 138 T 138 Score = 42.9 bits (99), Expect = 0.037, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 6/47 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42 F + +A A QRL+ A N++N T G ++ +V F+ Sbjct: 5 MNIFGVAGSAMSAQSQRLNVTASNLANADSTTGPDGQPYKAKQVVFA 51 >gi|295707173|ref|YP_003600248.1| flagellar hook-associated protein FlgK [Bacillus megaterium DSM 319] gi|294804832|gb|ADF41898.1| flagellar hook-associated protein FlgK [Bacillus megaterium DSM 319] Length = 507 Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 8/53 (15%), Positives = 22/53 (41%), Gaps = 5/53 (9%) Query: 196 RGFLED-----SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 +G +E S + EM MI +N+ ++ ++ + + + + + Sbjct: 452 QGAVEQRRQSTSAVSLDEEMTNMIQFQHAYNASARMVTMIDEMLDKIVNGLGT 504 Score = 49.9 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 13/89 (14%), Positives = 25/89 (28%), Gaps = 3/89 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDIDQKISFVA 60 + A + L T+ N+SN +T G+ +V F N Sbjct: 7 GLQVAKRGMDAQQAALYTIGHNVSNANTPGYTRQRVSLETFPAYPAPGMNQTGTAGQIGM 66 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAW 89 + + + D ++ W Sbjct: 67 GVEASTVERIRDTFLDTQYRDETIKVGYW 95 >gi|323527715|ref|YP_004229868.1| flagellar basal-body rod protein FlgC [Burkholderia sp. CCGE1001] gi|323384717|gb|ADX56808.1| flagellar basal-body rod protein FlgC [Burkholderia sp. CCGE1001] Length = 141 Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 10/61 (16%), Positives = 25/61 (40%) Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 P T + + G++ N + + EM MI ++ + + ++ + ML+ + Sbjct: 78 PTPMKTAYDPGNPAANADGYVTLPNVDPVQEMVNMISASRSYQANVETLNTAKTLMLKTL 137 Query: 239 R 239 Sbjct: 138 T 138 Score = 41.8 bits (96), Expect = 0.093, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 32/99 (32%), Gaps = 7/99 (7%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSEVVGAIKNDIDQK 55 F + +A A QRL+ A N++N T G +R +V F+ V Sbjct: 5 MNIFGVAGSAMSAQSQRLNVTASNLANADSTTGPDGQPYRAKQVVFA-VAPLGGARTASG 63 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES 94 + + + + A D + L + Sbjct: 64 QQVGGVQVTGVVDDPTPMKTAYDPGNPAANADGYVTLPN 102 >gi|24374760|ref|NP_718803.1| flagellar basal body rod protein FlgC [Shewanella oneidensis MR-1] gi|24349426|gb|AAN56247.1|AE015762_4 flagellar basal-body rod protein FlgC [Shewanella oneidensis MR-1] Length = 138 Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 19/42 (45%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 GF+ N N M EM MI ++ + + + + + + + Sbjct: 93 GFIYKPNVNVMEEMADMISASRSYQMNVQVAEAAKSMLQQTL 134 Score = 37.5 bits (85), Expect = 1.7, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 22/50 (44%), Gaps = 6/50 (12%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVG 46 F++ + A RL+T A N++N D+V +R+ F + Sbjct: 5 NIFDVAGSGMSAQSLRLNTTASNIANADSVSSSIDKTYRSRHPIFEAEMA 54 >gi|113969604|ref|YP_733397.1| flagellar basal body rod protein FlgC [Shewanella sp. MR-4] gi|114046836|ref|YP_737386.1| flagellar basal body rod protein FlgC [Shewanella sp. MR-7] gi|113884288|gb|ABI38340.1| flagellar basal-body rod protein FlgC [Shewanella sp. MR-4] gi|113888278|gb|ABI42329.1| flagellar basal-body rod protein FlgC [Shewanella sp. MR-7] Length = 138 Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 19/42 (45%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 GF+ N N M EM MI ++ + + + + + + + Sbjct: 93 GFIYKPNVNVMEEMADMISASRSYQMNVQVAEAAKSMLQQTL 134 Score = 36.8 bits (83), Expect = 3.0, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 23/50 (46%), Gaps = 6/50 (12%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVG 46 + F++ + A RL+T A N++N D+V +R+ F + Sbjct: 5 SIFDVAGSGMSAQSVRLNTTASNIANADSVSSSIDKTYRSRHPIFEAEMA 54 >gi|153001474|ref|YP_001367155.1| flagellar basal body rod protein FlgC [Shewanella baltica OS185] gi|160876205|ref|YP_001555521.1| flagellar basal body rod protein FlgC [Shewanella baltica OS195] gi|151366092|gb|ABS09092.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS185] gi|160861727|gb|ABX50261.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS195] gi|315268395|gb|ADT95248.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS678] Length = 138 Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 19/42 (45%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 GF+ N N M EM MI ++ + + + + + + + Sbjct: 93 GFIYKPNVNVMEEMADMISASRSYQMNVQVAEAAKSMLQQTL 134 Score = 36.8 bits (83), Expect = 3.0, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 23/50 (46%), Gaps = 6/50 (12%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVG 46 + F++ + A RL+T A N++N D+V +R+ F + Sbjct: 5 SIFDVAGSGMSAQSVRLNTTASNIANADSVSSSVDKTYRSRHPIFEAEMA 54 >gi|126175148|ref|YP_001051297.1| flagellar basal body rod protein FlgC [Shewanella baltica OS155] gi|125998353|gb|ABN62428.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS155] Length = 138 Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 19/42 (45%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 GF+ N N M EM MI ++ + + + + + + + Sbjct: 93 GFIYKPNVNVMEEMADMISASRSYQMNVQVAEAAKSMLQQTL 134 Score = 37.2 bits (84), Expect = 1.9, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 22/50 (44%), Gaps = 6/50 (12%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVG 46 + F++ + A RL+T A N++N D+V +R F + Sbjct: 5 SIFDVAGSGMSAQSVRLNTTASNIANADSVSSSVDKTYRARHPIFEAEMA 54 >gi|332530688|ref|ZP_08406619.1| flagellar basal body rod protein [Hylemonella gracilis ATCC 19624] gi|332039856|gb|EGI76251.1| flagellar basal body rod protein [Hylemonella gracilis ATCC 19624] Length = 101 Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 24/43 (55%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 M + +IG++ A + RL + A N++N +T GF+ V + Sbjct: 2 MASLSSIGISGLQAAQLRLDSSAHNVANLNTPGFKRQTVTQQD 44 >gi|322382305|ref|ZP_08056212.1| flagellar basal body rod protein FlgC-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153658|gb|EFX46033.1| flagellar basal body rod protein FlgC-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 129 Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 13/101 (12%), Positives = 33/101 (32%), Gaps = 9/101 (8%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKR---------G 197 +K V+ + + + +G + + V G Sbjct: 25 PYQRKMVVVEPKNQTNFAQNLQNAMKNGTGQGVRVSNIVGDQTPFKRVYNPVHPDSDADG 84 Query: 198 FLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 ++ N + EM MI T+ + + T ++ + + +A+ Sbjct: 85 YVYMPNVDIQKEMVDMISATRSYEANVTALNATKGMITKAL 125 >gi|148270547|ref|YP_001245007.1| flagellar basal-body rod protein FlgC [Thermotoga petrophila RKU-1] gi|170289253|ref|YP_001739491.1| flagellar basal-body rod protein FlgC [Thermotoga sp. RQ2] gi|147736091|gb|ABQ47431.1| flagellar basal-body rod protein FlgC [Thermotoga petrophila RKU-1] gi|170176756|gb|ACB09808.1| flagellar basal-body rod protein FlgC [Thermotoga sp. RQ2] Length = 140 Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N + EM +I+ + +++ + + + A++ Sbjct: 94 GYVRMPNVNIVREMVDLINAQRAYDANVAAFNVTKAMVNSALQ 136 Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 21/53 (39%), Gaps = 6/53 (11%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDT----VG--FRTIKVKFSEVVGAIKND 51 NI A R+ V+ N++N +T G +R F+E + N Sbjct: 8 MNISATGMSAQRLRVEIVSTNIANAETTRTETGEPYRRKVPVFAEYLRRTPNG 60 >gi|15644117|ref|NP_229166.1| flagellar basal-body rod protein FlgC [Thermotoga maritima MSB8] gi|281412855|ref|YP_003346934.1| flagellar basal-body rod protein FlgC [Thermotoga naphthophila RKU-10] gi|4981925|gb|AAD36435.1|AE001790_7 flagellar basal-body rod protein FlgC [Thermotoga maritima MSB8] gi|281373958|gb|ADA67520.1| flagellar basal-body rod protein FlgC [Thermotoga naphthophila RKU-10] Length = 140 Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N + EM +I+ + +++ + + + A++ Sbjct: 94 GYVRMPNVNIVREMVDLINAQRAYDANVAAFNVTKAMVNSALQ 136 Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 21/53 (39%), Gaps = 6/53 (11%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDT----VG--FRTIKVKFSEVVGAIKND 51 NI A R+ V+ N++N +T G +R F+E + N Sbjct: 8 MNISATGMSAQRLRVEIVSTNIANAETTRTETGEPYRRKVPVFAEYLRRTPNG 60 >gi|295096227|emb|CBK85317.1| flagellar basal-body rod protein FlgC [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 134 Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 6/45 (13%), Positives = 22/45 (48%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G+++ N + + EM + ++ + + +++ + ML+ + Sbjct: 87 ASGYVKMPNVDVVGEMVNSMSASRSYQANVEVLNTVKSMMLKTLT 131 Score = 39.5 bits (90), Expect = 0.48, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 6/47 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42 F+I +A A +RL+ A N++N G +R +V F Sbjct: 4 LNIFDIAGSALTAQSKRLNVAASNLANADSVTGPDGQPYRAKQVVFQ 50 >gi|291534844|emb|CBL07956.1| flagellar hook-associated protein FlgK [Roseburia intestinalis M50/1] Length = 589 Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 23/40 (57%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 S IG+A + + L+ ++N++N DT G+ V F++ Sbjct: 7 SMFIGVAGLQSSQNALNVTSNNLANLDTTGYVRQSVLFAD 46 Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats. Identities = 7/39 (17%), Positives = 16/39 (41%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 +S E+ MI +N+ + I+ + + I + Sbjct: 551 VSSDEELTYMIKYQNAYNASSRFINVINEMIEHLITQLG 589 >gi|170755438|ref|YP_001782346.1| flagellar hook-associated protein FlgK [Clostridium botulinum B1 str. Okra] gi|169120650|gb|ACA44486.1| flagellar hook-associated protein FlgK [Clostridium botulinum B1 str. Okra] Length = 621 Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 11/39 (28%), Positives = 21/39 (53%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 NIG + A + L+T + N++N +T G+ +V+ Sbjct: 8 LNIGKSGMFAQQGALNTTSHNIANANTEGYSRQRVELQT 46 Score = 39.5 bits (90), Expect = 0.39, Method: Composition-based stats. Identities = 4/40 (10%), Positives = 14/40 (35%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 S + E ++ + + +I ++ + I + Sbjct: 580 SGVSMDEEFANLVQFNHCYQANAKIISTVDQLLDVVINGL 619 >gi|299068730|emb|CBJ39969.1| FlgC: Flagellar basal-body rod protein [Ralstonia solanacearum CMR15] Length = 129 Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 20/43 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N + + EM MI ++ + + + + + +A+ Sbjct: 84 GYVTMPNVDVVDEMVNMISASRSYQANVEVANTTKTMAAKALT 126 Score = 37.5 bits (85), Expect = 1.4, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 23/44 (52%), Gaps = 6/44 (13%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDT------VGFRTIKVKFS 42 ++ +A A +R++ VA N++N ++ +R +V FS Sbjct: 1 MDVAGSALTAQSKRMNVVASNLANAESVTGPDGTAYRAKQVVFS 44 >gi|260574405|ref|ZP_05842409.1| flagellar basal-body rod protein FlgC [Rhodobacter sp. SW2] gi|259023301|gb|EEW26593.1| flagellar basal-body rod protein FlgC [Rhodobacter sp. SW2] Length = 126 Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 26/78 (33%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 S + + A RL V++N++N DT G+ + F E + + + Sbjct: 5 LQSLTMAASGMEAQAMRLRHVSENIANADTPGYHRKTMSFQEAMDGGTVEAGPVRLDRSE 64 Query: 62 GKEYLSKEVGSFISTGTE 79 + TG Sbjct: 65 LVKIYDPGHPLADETGHY 82 Score = 42.9 bits (99), Expect = 0.034, Method: Composition-based stats. Identities = 4/37 (10%), Positives = 13/37 (35%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 SN + + E+ + + + + D+ + Sbjct: 84 GSNVDLVIEIADAREAQRSYEANLKMFDQARQMTQSL 120 >gi|167465320|ref|ZP_02330409.1| flagellar basal body rod protein FlgC [Paenibacillus larvae subsp. larvae BRL-230010] Length = 149 Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 13/101 (12%), Positives = 33/101 (32%), Gaps = 9/101 (8%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKR---------G 197 +K V+ + + + +G + + V G Sbjct: 45 PYQRKMVVVEPKNQTNFAQNLQNAMKNGTGQGVRVSNIVGDQTPFKRVYNPVHPDSDADG 104 Query: 198 FLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 ++ N + EM MI T+ + + T ++ + + +A+ Sbjct: 105 YVYMPNVDIQKEMVDMISATRSYEANVTALNATKGMITKAL 145 Score = 40.2 bits (92), Expect = 0.24, Method: Composition-based stats. Identities = 8/30 (26%), Positives = 16/30 (53%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV 32 F+I +A A R+ ++ N++N D+ Sbjct: 5 NGFDISSSALTAQRLRMDVISSNIANADST 34 >gi|258592507|emb|CBE68816.1| flagellar basal-body rod protein FlgC (cell-proximal rod protein) [NC10 bacterium 'Dutch sediment'] Length = 140 Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 7/42 (16%), Positives = 20/42 (47%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N N + EM ++ ++ + + + I + M + + Sbjct: 95 GYVAMPNINPVMEMVDLMSASRAYEANISAIQIAKSMMTKTL 136 Score = 35.2 bits (79), Expect = 7.9, Method: Composition-based stats. Identities = 9/32 (28%), Positives = 16/32 (50%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32 M S I A A R++ +A+N++N + Sbjct: 1 MFASMEINATALAAQRVRMNLIAENLANAEVT 32 >gi|300854137|ref|YP_003779121.1| Flagellar hook-associated protein [Clostridium ljungdahlii DSM 13528] gi|300434252|gb|ADK14019.1| Flagellar hook-associated protein [Clostridium ljungdahlii DSM 13528] Length = 638 Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 7/41 (17%), Positives = 18/41 (43%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 + FN + A + ++ + N++N +T G+ + Sbjct: 6 SIFNTAKSGLFAQQTAINVTSHNIANANTDGYSRQRADMET 46 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 6/41 (14%), Positives = 16/41 (39%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 +S + EM +I + + +I ++ + I + Sbjct: 596 NSGVSIDEEMTNLIQFQHCYQANAKMISTVDELLDVVINQL 636 >gi|302878274|ref|YP_003846838.1| flagellar basal-body rod protein FlgC [Gallionella capsiferriformans ES-2] gi|302581063|gb|ADL55074.1| flagellar basal-body rod protein FlgC [Gallionella capsiferriformans ES-2] Length = 134 Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 23/43 (53%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N + EM MI ++ + + +++ ++ +L+ + Sbjct: 89 GYVSMPNVNVVDEMVNMISASRAYQNNVDVLNTSKTLLLKTLT 131 Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 23/120 (19%), Positives = 39/120 (32%), Gaps = 6/120 (5%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSEVVGAIKNDIDQKI 56 FN+ + A QRL+ VA N++N T G +R +V FS + K+ Sbjct: 5 NIFNVAGSGMAAQSQRLNVVASNLANADSTTGADGKPYRAKQVVFSATPMGSTDVQGVKV 64 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVS 116 VA + + + E I +R + V + + Sbjct: 65 VRVAEDTSPMKIVYDPKHPMADAKGYVSMPNVNVVDEMVNMISASRAYQNNVDVLNTSKT 124 >gi|312876494|ref|ZP_07736477.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor lactoaceticus 6A] gi|311796705|gb|EFR13051.1| flagellar basal-body rod protein FlgC [Caldicellulosiruptor lactoaceticus 6A] Length = 147 Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 20/43 (46%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 + G++ N + + EM MI ++ + + T ++ + + Sbjct: 100 QNGYVNYPNVDIVTEMVNMIEASRSYEANVTALNITKSMITRT 142 Score = 52.6 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 6/49 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43 M + NI +A A R+ +A N++N +T G +R V F E Sbjct: 3 MFDAINISSSALAAQRVRMDVIAQNIANANTTRTENGQPYRRKVVVFEE 51 >gi|74101664|gb|AAZ99754.1| FlgKL [Aeromonas hydrophila] Length = 437 Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 28/59 (47%), Gaps = 2/59 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV--VGAIKNDIDQKISFVA 60 NIG + A + L+ A N++N +T+G+ + + G + N + +++ V Sbjct: 1 MLNIGFSGLNAAQIALNVTAQNIANVNTIGYSRQEAMMGSLSGFGRLDNGMGVEVTGVR 59 Score = 39.1 bits (89), Expect = 0.53, Method: Composition-based stats. Identities = 5/38 (13%), Positives = 17/38 (44%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S N+ E +++ T+ + + +I +++ + Sbjct: 398 SGVNTDEEGVKIMAYTKAYQANAKVISTSDQLFNSILN 435 >gi|262404542|ref|ZP_06081097.1| flagellar basal-body rod protein FlgC [Vibrio sp. RC586] gi|262349574|gb|EEY98712.1| flagellar basal-body rod protein FlgC [Vibrio sp. RC586] Length = 138 Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 23/43 (53%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N M EM MI ++ + + + D +++ +L ++ Sbjct: 93 GYIYKPNVNVMEEMANMISASRSYQTNVQVADASKQMLLRTLQ 135 >gi|253998490|ref|YP_003050553.1| flagellar basal-body rod protein FlgC [Methylovorus sp. SIP3-4] gi|313200565|ref|YP_004039223.1| flagellar basal-body rod protein flgc [Methylovorus sp. MP688] gi|253985169|gb|ACT50026.1| flagellar basal-body rod protein FlgC [Methylovorus sp. SIP3-4] gi|312439881|gb|ADQ83987.1| flagellar basal-body rod protein FlgC [Methylovorus sp. MP688] Length = 134 Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 8/45 (17%), Positives = 21/45 (46%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +G++ N N EM MI ++ + + ++ + +L+ + Sbjct: 87 AQGYVTMPNVNVTEEMVNMISASRAYQNNVETMNAAKTMLLKTLT 131 Score = 37.5 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 34/106 (32%), Gaps = 6/106 (5%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDT----VG--FRTIKVKFSEVVGAIKNDIDQKI 56 FN+ +A A QRL+ VA N++N D+ G ++ +V FS K+ Sbjct: 5 NVFNVSGSAMSAQSQRLNAVASNLANADSATSANGQPYKAKQVVFSATPTNNAAVSGVKV 64 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTR 102 V + + E I +R Sbjct: 65 QQVIEDPSPPKVVYDPKHPAANAQGYVTMPNVNVTEEMVNMISASR 110 >gi|217972596|ref|YP_002357347.1| flagellar basal body rod protein FlgC [Shewanella baltica OS223] gi|304409980|ref|ZP_07391599.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS183] gi|307302307|ref|ZP_07582065.1| flagellar basal-body rod protein FlgC [Shewanella baltica BA175] gi|217497731|gb|ACK45924.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS223] gi|304351389|gb|EFM15788.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS183] gi|306914345|gb|EFN44766.1| flagellar basal-body rod protein FlgC [Shewanella baltica BA175] Length = 138 Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 19/42 (45%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 GF+ N N M EM MI ++ + + + + + + + Sbjct: 93 GFIYKPNVNVMEEMADMISASRSYQMNVQVAEAAKSMLQQTL 134 Score = 36.4 bits (82), Expect = 3.3, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 23/50 (46%), Gaps = 6/50 (12%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVG 46 + F++ + A RL+T A N++N D+V +R+ F + Sbjct: 5 SIFDVAGSGMSAQSVRLNTTASNIANADSVSSSVDKTYRSRHPIFEAEMA 54 >gi|153213630|ref|ZP_01948903.1| flagellar basal-body rod protein FlgC [Vibrio cholerae 1587] gi|153825350|ref|ZP_01978017.1| flagellar basal-body rod protein FlgC [Vibrio cholerae MZO-2] gi|153829337|ref|ZP_01982004.1| flagellar basal-body rod protein FlgC [Vibrio cholerae 623-39] gi|183179563|ref|ZP_02957774.1| flagellar basal-body rod protein FlgC [Vibrio cholerae MZO-3] gi|229513843|ref|ZP_04403305.1| flagellar basal-body rod protein FlgC [Vibrio cholerae TMA 21] gi|229522148|ref|ZP_04411565.1| flagellar basal-body rod protein FlgC [Vibrio cholerae TM 11079-80] gi|229524194|ref|ZP_04413599.1| flagellar basal-body rod protein FlgC [Vibrio cholerae bv. albensis VL426] gi|229528796|ref|ZP_04418186.1| flagellar basal-body rod protein FlgC [Vibrio cholerae 12129(1)] gi|254286492|ref|ZP_04961449.1| flagellar basal-body rod protein FlgC [Vibrio cholerae AM-19226] gi|258621047|ref|ZP_05716081.1| Flagellar basal-body rod protein flgC [Vibrio mimicus VM573] gi|258625275|ref|ZP_05720183.1| Flagellar basal-body rod protein flgC [Vibrio mimicus VM603] gi|261211324|ref|ZP_05925612.1| flagellar basal-body rod protein FlgC [Vibrio sp. RC341] gi|262170823|ref|ZP_06038501.1| flagellar basal-body rod protein FlgC [Vibrio mimicus MB-451] gi|262191691|ref|ZP_06049867.1| flagellar basal-body rod protein FlgC [Vibrio cholerae CT 5369-93] gi|297580845|ref|ZP_06942770.1| flagellar basal-body rod protein FlgC [Vibrio cholerae RC385] gi|124115829|gb|EAY34649.1| flagellar basal-body rod protein FlgC [Vibrio cholerae 1587] gi|148875178|gb|EDL73313.1| flagellar basal-body rod protein FlgC [Vibrio cholerae 623-39] gi|149741034|gb|EDM55103.1| flagellar basal-body rod protein FlgC [Vibrio cholerae MZO-2] gi|150423441|gb|EDN15385.1| flagellar basal-body rod protein FlgC [Vibrio cholerae AM-19226] gi|183012974|gb|EDT88274.1| flagellar basal-body rod protein FlgC [Vibrio cholerae MZO-3] gi|229332570|gb|EEN98056.1| flagellar basal-body rod protein FlgC [Vibrio cholerae 12129(1)] gi|229337775|gb|EEO02792.1| flagellar basal-body rod protein FlgC [Vibrio cholerae bv. albensis VL426] gi|229341073|gb|EEO06078.1| flagellar basal-body rod protein FlgC [Vibrio cholerae TM 11079-80] gi|229349024|gb|EEO13981.1| flagellar basal-body rod protein FlgC [Vibrio cholerae TMA 21] gi|258582448|gb|EEW07289.1| Flagellar basal-body rod protein flgC [Vibrio mimicus VM603] gi|258586435|gb|EEW11150.1| Flagellar basal-body rod protein flgC [Vibrio mimicus VM573] gi|260839279|gb|EEX65905.1| flagellar basal-body rod protein FlgC [Vibrio sp. RC341] gi|261891899|gb|EEY37885.1| flagellar basal-body rod protein FlgC [Vibrio mimicus MB-451] gi|262032430|gb|EEY50992.1| flagellar basal-body rod protein FlgC [Vibrio cholerae CT 5369-93] gi|297534671|gb|EFH73507.1| flagellar basal-body rod protein FlgC [Vibrio cholerae RC385] gi|327484718|gb|AEA79125.1| Flagellar basal-body rod protein FlgC [Vibrio cholerae LMA3894-4] Length = 138 Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 23/43 (53%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N M EM MI ++ + + + D +++ +L ++ Sbjct: 93 GYIYKPNVNVMEEMANMISASRSYQTNVQVADASKQMLLRTLQ 135 >gi|295401181|ref|ZP_06811154.1| flagellar hook-associated protein FlgK [Geobacillus thermoglucosidasius C56-YS93] gi|294976774|gb|EFG52379.1| flagellar hook-associated protein FlgK [Geobacillus thermoglucosidasius C56-YS93] Length = 530 Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 19/41 (46%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S+ + EM MI +N+ +I ++ + + I N+ Sbjct: 486 SSVSLDEEMTNMIKFQHAYNAAARMITAIDEMLDKIINNMG 526 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 21/46 (45%), Gaps = 3/46 (6%) Query: 1 MQTSFN---IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 M ++F+ + + L A N++N +T G+ +V F E Sbjct: 1 MLSTFHGLEVAKRGMFTQQAALYVTAHNIANANTPGYSRQRVNFVE 46 >gi|238782790|ref|ZP_04626819.1| Flagellar basal-body rod protein flgC [Yersinia bercovieri ATCC 43970] gi|238716213|gb|EEQ08196.1| Flagellar basal-body rod protein flgC [Yersinia bercovieri ATCC 43970] Length = 121 Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N + EM I ++ + + +++ + ML+ + Sbjct: 76 GYVRMPNVNVVSEMVNTISASRSYQANVEVLNTAKSMMLKTLT 118 >gi|326202857|ref|ZP_08192724.1| flagellar hook-associated protein FlgK [Clostridium papyrosolvens DSM 2782] gi|325986934|gb|EGD47763.1| flagellar hook-associated protein FlgK [Clostridium papyrosolvens DSM 2782] Length = 544 Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 29/229 (12%), Positives = 69/229 (30%), Gaps = 18/229 (7%) Query: 32 VGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA 91 ++ +F + N+ K + + + + + T+ + A G +F Sbjct: 314 PYYQKKLNEFVQTFAIAFNEGYTKTNSGYAHTDVGHIDGYGYDPDLTDANTAPTGIRFFT 373 Query: 92 LESPRGIILTRDGRF--------------KVTDDGSLVSASGKYPVLDMASVPIQIPQKD 137 + ++ +V ++A D+ P I + Sbjct: 374 MLGVGNTPISSADLIAGVTVGKSDPDYINQVAQQYKQITAKNFSVSSDIIDNPNNIAASE 433 Query: 138 EIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRG 197 G G + + + L+ + F++ +G+ + ++ T+ R Sbjct: 434 TTGQNGNTGVLKKLMGIRTNQSLFKEGAPEDFMKSLVAGMGIDAQQAETFAITQDTLVRQ 493 Query: 198 F----LEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 + S N EM MI Q +N+ +I + I + Sbjct: 494 VDNRRMSVSGVNLNEEMTNMIKFQQSYNAAARMIVTMGQIYDTLINKLG 542 Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 23/80 (28%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 NI L+ ++ L TV N+SN T G+ + S D + + Sbjct: 7 GLNIALSGLYTAQRNLDTVGHNLSNATTPGYSRQQTIQSASNPLAVLDGTGMVGTGSQAT 66 Query: 64 EYLSKEVGSFISTGTELDFA 83 + A Sbjct: 67 GVQRIRDSYLDFKYWSENVA 86 >gi|254445805|ref|ZP_05059281.1| flagellar hook-associated protein FlgK [Verrucomicrobiae bacterium DG1235] gi|198260113|gb|EDY84421.1| flagellar hook-associated protein FlgK [Verrucomicrobiae bacterium DG1235] Length = 486 Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 7/40 (17%), Positives = 16/40 (40%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 S + EM M+ + F + LI ++ + + + Sbjct: 446 SGVSIDEEMTDMMKFQRAFQATGKLIQTIDEMLDVIVNRL 485 >gi|89056688|ref|YP_512139.1| flagellar basal body rod protein FlgC [Jannaschia sp. CCS1] gi|88866237|gb|ABD57114.1| flagellar basal-body rod protein FlgC [Jannaschia sp. CCS1] Length = 130 Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 12/81 (14%), Positives = 31/81 (38%), Gaps = 2/81 (2%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKF--SEVVGAIKNDIDQKISFVA 60 + ++ + A QRL+ V++N++N DT G++ F A++ + + Sbjct: 6 NALSVAASGMRAQTQRLTHVSENIANADTPGYQRKITSFEVERGFSAVEGQVRTGPVRLD 65 Query: 61 SGKEYLSKEVGSFISTGTELD 81 + + ++ Sbjct: 66 QTALPVIFDPSHPMADEAGSY 86 Score = 42.2 bits (97), Expect = 0.067, Method: Composition-based stats. Identities = 11/79 (13%), Positives = 29/79 (36%), Gaps = 1/79 (1%) Query: 163 VDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS 222 +G VR + P + + + G E SN + + E+ + + + Sbjct: 50 FSAVEGQVRTGPVRLDQTALPVIFDPSHPMADEAGSYEGSNVDLVIELADAREANRSYEA 109 Query: 223 ITTLIDENEKSMLEAIRNI 241 + D+ + M ++ ++ Sbjct: 110 NLRIFDQIRQ-MSSSLNDL 127 >gi|237796175|ref|YP_002863727.1| flagellar hook-associated protein FlgK [Clostridium botulinum Ba4 str. 657] gi|229264184|gb|ACQ55217.1| flagellar hook-associated protein FlgK [Clostridium botulinum Ba4 str. 657] Length = 622 Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 11/39 (28%), Positives = 21/39 (53%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 NIG + A + L+T + N++N +T G+ +V+ Sbjct: 8 LNIGKSGMFAQQGALNTTSHNIANANTEGYSRQRVELQT 46 Score = 39.5 bits (90), Expect = 0.44, Method: Composition-based stats. Identities = 4/40 (10%), Positives = 14/40 (35%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 S + E ++ + + +I ++ + I + Sbjct: 581 SGVSMDEEFANLVQFNHCYQANAKIISTVDQLLDVVINGL 620 >gi|168183196|ref|ZP_02617860.1| flagellar hook-associated protein FlgK [Clostridium botulinum Bf] gi|182673575|gb|EDT85536.1| flagellar hook-associated protein FlgK [Clostridium botulinum Bf] Length = 622 Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 11/39 (28%), Positives = 21/39 (53%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 NIG + A + L+T + N++N +T G+ +V+ Sbjct: 8 LNIGKSGMFAQQGALNTTSHNIANANTEGYSRQRVELQT 46 Score = 39.5 bits (90), Expect = 0.44, Method: Composition-based stats. Identities = 4/40 (10%), Positives = 14/40 (35%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 S + E ++ + + +I ++ + I + Sbjct: 581 SGVSMDEEFANLVQFNHCYQANAKIISTVDQLLDVVINGL 620 >gi|297538894|ref|YP_003674663.1| flagellar basal-body rod protein FlgC [Methylotenera sp. 301] gi|297258241|gb|ADI30086.1| flagellar basal-body rod protein FlgC [Methylotenera sp. 301] Length = 135 Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 20/43 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N EM MI ++ + + ++ + +L+ + Sbjct: 89 GYVTMPNVNVTEEMVNMISASRAYQNNVETMNAAKTMLLKTLT 131 Score = 41.4 bits (95), Expect = 0.099, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 36/107 (33%), Gaps = 8/107 (7%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTD-------TVGFRTIKVKFSEVVGAIKNDIDQK 55 FNI +A A QRL+TVA N++N D T ++ +V FS + K Sbjct: 5 NVFNISGSAMSAQAQRLNTVASNLANADSATSANGTP-YKAKQVVFSATPTGSPDASGVK 63 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTR 102 + V + + + E I +R Sbjct: 64 VLKVIEDNSPAKVVYDPKHPLANDKGYVTMPNVNVTEEMVNMISASR 110 >gi|126697802|ref|YP_001086699.1| putative flagellar hook-associated protein [Clostridium difficile 630] gi|115249239|emb|CAJ67052.1| Flagellar hook-associated protein FlgK (or HAP1) [Clostridium difficile] Length = 436 Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 33/77 (42%), Gaps = 4/77 (5%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE----VVGAIKNDIDQKISF 58 + N + A ++ + T++ N+SN DT G+ + +F+ + ++ N I + Sbjct: 6 SILNTANSGMNAHQKSIQTISHNISNLDTDGYSRQRTEFATNSPMYMPSLSNSIGRGQLG 65 Query: 59 VASGKEYLSKEVGSFIS 75 +++ SF Sbjct: 66 TGVHVTDVTRARNSFYD 82 Score = 49.1 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 5/40 (12%), Positives = 17/40 (42%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 S + EM +++ + + + + ++ + + I I Sbjct: 396 SGVSLDEEMTELMKVQRSYQASAKVMSTAVQLLDVVINGI 435 >gi|330720177|gb|EGG98566.1| Flagellar basal-body rod protein FlgC [gamma proteobacterium IMCC2047] Length = 150 Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N + + EM MI ++ + + +++ ++ M + Sbjct: 105 GYVYYPNVDVVTEMADMISASRAYQTNVEIMNTAKQMMQRVLT 147 >gi|295678060|ref|YP_003606584.1| flagellar basal-body rod protein FlgC [Burkholderia sp. CCGE1002] gi|295437903|gb|ADG17073.1| flagellar basal-body rod protein FlgC [Burkholderia sp. CCGE1002] Length = 141 Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 10/61 (16%), Positives = 26/61 (42%) Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 P+ T + + G++ N + + EM MI ++ + + ++ + ML+ + Sbjct: 78 PSPMKTAYDPGNPAADANGYVTLPNVDPVQEMVNMISASRSYQANVETLNTAKTLMLKTL 137 Query: 239 R 239 Sbjct: 138 T 138 Score = 41.4 bits (95), Expect = 0.097, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 6/47 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42 F + +A A +RL+ A N++N T G ++ +V F+ Sbjct: 5 MNIFGVAGSAMSAQSERLNVTASNLANADSTTGPDGQPYKAKQVIFA 51 >gi|239907806|ref|YP_002954547.1| putative flagellar basal-body rod protein [Desulfovibrio magneticus RS-1] gi|239797672|dbj|BAH76661.1| putative flagellar basal-body rod protein [Desulfovibrio magneticus RS-1] Length = 128 Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 11/69 (15%), Positives = 23/69 (33%) Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 VR + G + G +E SN + + MI ++ F + I Sbjct: 56 VRDASPGGYQPESVSAYNQAGVYEPSAGLVETSNVDLARQTVDMIQTSRAFEANVVTIRS 115 Query: 230 NEKSMLEAI 238 ++ + + Sbjct: 116 QDQMLGTLL 124 Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 21/43 (48%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 M + + +A A ++ A+N++N +T G+++ + Sbjct: 1 MTDAISAAQSALSAFSTSMAVTANNVANVNTDGYKSQDARLET 43 >gi|226327748|ref|ZP_03803266.1| hypothetical protein PROPEN_01621 [Proteus penneri ATCC 35198] gi|225203452|gb|EEG85806.1| hypothetical protein PROPEN_01621 [Proteus penneri ATCC 35198] Length = 134 Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 6/42 (14%), Positives = 20/42 (47%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N + + EM I ++ + + +++ + M + + Sbjct: 89 GYVRMPNVDVVGEMINTISASRSYQANVEVMNTAKSLMQKTL 130 Score = 36.4 bits (82), Expect = 3.8, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 31/79 (39%), Gaps = 6/79 (7%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56 + F+I +A A QRL+ A NM+N D+V +R +V F A + ++ Sbjct: 5 SIFDISGSALSAQSQRLNVSASNMANADSVAGPDGEPYRAKQVVFQVNAPAGQEVGGVRV 64 Query: 57 SFVASGKEYLSKEVGSFIS 75 + V E Sbjct: 65 TEVVDDPAPFRMEYQPGHP 83 >gi|187926956|ref|YP_001893301.1| flagellar basal-body rod protein FlgC [Ralstonia pickettii 12J] gi|241665285|ref|YP_002983644.1| flagellar basal-body rod protein FlgC [Ralstonia pickettii 12D] gi|187728710|gb|ACD29874.1| flagellar basal-body rod protein FlgC [Ralstonia pickettii 12J] gi|240867312|gb|ACS64972.1| flagellar basal-body rod protein FlgC [Ralstonia pickettii 12D] Length = 135 Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 20/43 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N + + EM MI ++ + + + + + +A+ Sbjct: 90 GYVTMPNVDVVDEMVNMISASRSYQANVEVANTTKTMAAKALT 132 Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 14/86 (16%), Positives = 32/86 (37%), Gaps = 8/86 (9%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNT------DTVGFRTIKVKFSEVVGAIKNDIDQKI 56 ++ +A A +R++ VA N++N + +R +V F+ V +D + Sbjct: 5 KVMDVAGSALTAQSKRMNVVASNLANAESVTGPNGTAYRAKQVVFTPV--QESDDYATGV 62 Query: 57 SFVASGKEYLSKEVGSFISTGTELDF 82 S ++ ++ D Sbjct: 63 SVDRVVEDTVTPMKRMHQPGNPLADA 88 >gi|302871568|ref|YP_003840204.1| flagellar hook-associated protein FlgK [Caldicellulosiruptor obsidiansis OB47] gi|302574427|gb|ADL42218.1| flagellar hook-associated protein FlgK [Caldicellulosiruptor obsidiansis OB47] Length = 525 Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 20/192 (10%), Positives = 56/192 (29%), Gaps = 11/192 (5%) Query: 51 DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTD 110 I ++ + + L ++ + G L+ G +F + R + Sbjct: 341 GIPYYLNRLNEFAQKLIEKFNELHTQGWSLNGQNTGINFFEPPVGQTFFYARYIKVSDAI 400 Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170 L + + Y ++ + ++ N + + + ++ SQG Sbjct: 401 MNDLNNIATTYDASNLPGGNDLVVDMLKLRNDTSIFKEGKFEDFLKSLISNLGVDSQG-- 458 Query: 171 RRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + N + + G + EM +I F + +I+ Sbjct: 459 ---AKNFAENQKVMVTQLDNRRQAVSG------VSIDEEMTNLIKYQHGFQASARMINAF 509 Query: 231 EKSMLEAIRNIA 242 ++ + + + Sbjct: 510 DEMLDVIVNRLG 521 Score = 43.3 bits (100), Expect = 0.030, Method: Composition-based stats. Identities = 11/77 (14%), Positives = 21/77 (27%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 I + L + N++N T G+ + + K V G Sbjct: 5 GLEIARTGIFVNRKGLEVTSHNVANASTPGYTRQVLNVKSNPPSSKVGFYSPKFQVGMGA 64 Query: 64 EYLSKEVGSFISTGTEL 80 + S E + + Sbjct: 65 DVQSLEQIRDMFLDMQY 81 >gi|319764537|ref|YP_004128474.1| flagellar basal-body rod protein flgc [Alicycliphilus denitrificans BC] gi|330826753|ref|YP_004390056.1| flagellar basal-body rod protein FlgC [Alicycliphilus denitrificans K601] gi|317119098|gb|ADV01587.1| flagellar basal-body rod protein FlgC [Alicycliphilus denitrificans BC] gi|329312125|gb|AEB86540.1| flagellar basal-body rod protein FlgC [Alicycliphilus denitrificans K601] Length = 134 Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 25/43 (58%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ SN N++ EM MI ++ + + +++ + +L+ ++ Sbjct: 89 GYVTHSNVNAVEEMVNMISASRSYQNNVEVMNTAKSLLLKTLQ 131 Score = 42.2 bits (97), Expect = 0.068, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 37/109 (33%), Gaps = 6/109 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQ 54 M + FN+ +A A QRL+ VA N++N D V ++ +V F + Sbjct: 3 MFSIFNVSGSAISAQSQRLNVVASNLANVDAVAGPDGQAYKARQVVFQTAPMGPDSSAGV 62 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103 ++S + + + + E I +R Sbjct: 63 RVSTIQESGVPGRRVHDPSNPMADAEGYVTHSNVNAVEEMVNMISASRS 111 >gi|117919770|ref|YP_868962.1| flagellar basal body rod protein FlgC [Shewanella sp. ANA-3] gi|117612102|gb|ABK47556.1| flagellar basal-body rod protein FlgC [Shewanella sp. ANA-3] Length = 138 Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 19/42 (45%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 GF+ N N M EM MI ++ + + + + + + + Sbjct: 93 GFIYKPNVNVMEEMADMISASRSYQMNVQVAEAAKSMLQQTL 134 Score = 37.2 bits (84), Expect = 2.0, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 22/50 (44%), Gaps = 6/50 (12%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVG 46 F++ + A RL+T A N++N D+V +R+ F + Sbjct: 5 NIFDVAGSGMSAQSLRLNTTASNIANADSVSSSVDKTYRSRHPIFEAEMA 54 >gi|104782845|ref|YP_609343.1| flagellar basal body rod protein FlgC [Pseudomonas entomophila L48] gi|95111832|emb|CAK16556.1| flagellar cell-proximal portion of basal-body rod FlgC [Pseudomonas entomophila L48] Length = 147 Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 32/73 (43%), Gaps = 6/73 (8%) Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 +G + +++ + P P + K G++ N N + EM MI ++ F + L Sbjct: 78 KGIIEDQSNLEARYEPNHPAAN------KDGYVYYPNVNVVEEMADMISASRAFQTNAEL 131 Query: 227 IDENEKSMLEAIR 239 ++ + M + + Sbjct: 132 MNTAKTMMQKVLT 144 Score = 44.5 bits (103), Expect = 0.012, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 6/56 (10%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQ 54 FNI + A RL+TVA N++N +TV +R F+ + + Q Sbjct: 7 FNIAGSGMSAQNTRLNTVASNIANAETVSSSLDQTYRARHPVFATTFQQAQGGVGQ 62 >gi|71906389|ref|YP_283976.1| flagellar basal-body rod protein FlgC [Dechloromonas aromatica RCB] gi|71846010|gb|AAZ45506.1| Flagellar basal-body rod protein FlgC [Dechloromonas aromatica RCB] Length = 137 Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N + EM MI ++ + + +++ + +L + Sbjct: 91 GYVAFPNVNVVEEMTNMISASRSYQTNVEVMNTAKTMLLRTLS 133 Score = 38.7 bits (88), Expect = 0.81, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 26/64 (40%), Gaps = 6/64 (9%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDIDQKI 56 F + +A A RL+T A N++N D+V G +R +V F D + + Sbjct: 5 NVFQVSSSAMTAQSMRLNTTASNLANADSVISADGKPYRAKQVVFEATPMGNAGDSSKGV 64 Query: 57 SFVA 60 Sbjct: 65 RVRQ 68 >gi|222055648|ref|YP_002538010.1| flagellar basal-body rod protein FlgC [Geobacter sp. FRC-32] gi|221564937|gb|ACM20909.1| flagellar basal-body rod protein FlgC [Geobacter sp. FRC-32] Length = 139 Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G++ N N + EM M+ T+ + + TT + ++A+ I S Sbjct: 93 GYVAYPNVNIVEEMADMVTATRAYEANTTAMKAGMDMQMKAL-EIGS 138 Score = 42.5 bits (98), Expect = 0.056, Method: Composition-based stats. Identities = 13/100 (13%), Positives = 35/100 (35%), Gaps = 7/100 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDIDQ 54 M + I +A A R++ ++ N++N ++ G +R F+ V+ +++ Sbjct: 1 MD-AMEISASALTAERTRMNLISSNLANANSTRTDEGGQYRRKDAVFATVLDGASANMEG 59 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES 94 + + ++ D + A + Sbjct: 60 GTEVIGVEVVNIIEDQSPPRLQYDPGHPDAREDGYVAYPN 99 >gi|224373490|ref|YP_002607862.1| flagellar hook-associated protein FlgK [Nautilia profundicola AmH] gi|223589300|gb|ACM93036.1| flagellar hook-associated protein FlgK [Nautilia profundicola AmH] Length = 727 Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 30/79 (37%), Gaps = 2/79 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV--VGAIKNDIDQKISFVAS 61 SF+ L A + + ++N+SN + + FS + + +I DI + + Sbjct: 6 SFSTALTGLKAHQTAIDVTSNNISNASNPDYVRERAVFSTLNPINSIPGDIGTGVQISSI 65 Query: 62 GKEYLSKEVGSFISTGTEL 80 + + + ST Sbjct: 66 YRITDTFLFNRYTSTSATF 84 Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 5/71 (7%), Positives = 18/71 (25%) Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 +G + ++ + S N E+ + + + + + Sbjct: 652 RGLTADLANQTQIVSSKKESTQTLLTSISNEYYSLSGVNIDEELVNLEQYQRGYQANAKV 711 Query: 227 IDENEKSMLEA 237 I + + Sbjct: 712 ITTINQMLDAL 722 >gi|127512277|ref|YP_001093474.1| flagellar basal body rod protein FlgC [Shewanella loihica PV-4] gi|126637572|gb|ABO23215.1| flagellar basal-body rod protein FlgC [Shewanella loihica PV-4] Length = 139 Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 20/43 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 GF+ N N M EM MI ++ + + D + + + +R Sbjct: 93 GFIYKPNVNVMEEMANMISASRSYQMNVQVADAAKSMLQQTLR 135 Score = 40.2 bits (92), Expect = 0.25, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 31/87 (35%), Gaps = 6/87 (6%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56 FN+ + A RL+T A N++N D+V +R F + + + Sbjct: 5 NIFNVAGSGMSAQSVRLNTTASNIANADSVSSSVDKTYRARHPVFEAELAKASHQQNTSQ 64 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFA 83 + +G K + S L A Sbjct: 65 AVKVAGIVESDKPLQKEYSPDHPLADA 91 >gi|260774936|ref|ZP_05883837.1| flagellar basal-body rod protein FlgC [Vibrio coralliilyticus ATCC BAA-450] gi|260609191|gb|EEX35349.1| flagellar basal-body rod protein FlgC [Vibrio coralliilyticus ATCC BAA-450] Length = 138 Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 23/43 (53%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N M EM MI ++ + + + D +++ +L ++ Sbjct: 93 GYIYKPNVNVMEEMANMISASRSYQTNVQVADASKQMLLRTLQ 135 Score = 35.6 bits (80), Expect = 6.8, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 25/62 (40%), Gaps = 6/62 (9%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56 FN+ +A A RL+T + N++N D+V ++ F + K D + Sbjct: 5 NVFNVTGSAMSAESVRLNTTSSNLANADSVSSSAKDTYKARHAVFGAELSKAKYGRDHTV 64 Query: 57 SF 58 Sbjct: 65 PV 66 >gi|148380698|ref|YP_001255239.1| flagellar hook-associated protein FlgK [Clostridium botulinum A str. ATCC 3502] gi|153932743|ref|YP_001384982.1| flagellar hook-associated protein FlgK [Clostridium botulinum A str. ATCC 19397] gi|153935679|ref|YP_001388452.1| flagellar hook-associated protein FlgK [Clostridium botulinum A str. Hall] gi|226950152|ref|YP_002805243.1| flagellar hook-associated protein FlgK [Clostridium botulinum A2 str. Kyoto] gi|148290182|emb|CAL84301.1| flagellar hook-associated protein 1 [Clostridium botulinum A str. ATCC 3502] gi|152928787|gb|ABS34287.1| flagellar hook-associated protein FlgK [Clostridium botulinum A str. ATCC 19397] gi|152931593|gb|ABS37092.1| flagellar hook-associated protein FlgK [Clostridium botulinum A str. Hall] gi|226841472|gb|ACO84138.1| flagellar hook-associated protein FlgK [Clostridium botulinum A2 str. Kyoto] Length = 622 Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 11/39 (28%), Positives = 21/39 (53%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 NIG + A + L+T + N++N +T G+ +V+ Sbjct: 8 LNIGKSGMFAQQGALNTTSHNIANANTEGYSRQRVELQT 46 Score = 39.5 bits (90), Expect = 0.46, Method: Composition-based stats. Identities = 4/40 (10%), Positives = 14/40 (35%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 S + E ++ + + +I ++ + I + Sbjct: 581 SGVSMDEEFANLVQFNHCYQANAKIISTVDQLLDVVINGL 620 >gi|304438469|ref|ZP_07398409.1| flagellar basal-body rod protein FlgB [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304368552|gb|EFM22237.1| flagellar basal-body rod protein FlgB [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 139 Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 12/73 (16%), Positives = 28/73 (38%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 ++ A A R +++N++N +T F+ V+F +++ D + V + Sbjct: 11 IDVSSRAMAASTLRHEVLSNNIANVNTPNFKRSHVRFEDLLKKELGLEDDPLMPVVRTHD 70 Query: 65 YLSKEVGSFISTG 77 + G Sbjct: 71 RHLPLAYRGKAHG 83 >gi|238919257|ref|YP_002932772.1| flagellar basal-body rod protein FlgC, [Edwardsiella ictaluri 93-146] gi|238868826|gb|ACR68537.1| flagellar basal-body rod protein FlgC, putative [Edwardsiella ictaluri 93-146] Length = 134 Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 6/43 (13%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N + + EM I ++ + + +++ + M++ + Sbjct: 89 GYVRMPNVDVVSEMVNSIAASRSYQANVEVLNTTKSLMMKTLT 131 >gi|224825162|ref|ZP_03698268.1| flagellar basal-body rod protein FlgC [Lutiella nitroferrum 2002] gi|224602833|gb|EEG09010.1| flagellar basal-body rod protein FlgC [Lutiella nitroferrum 2002] Length = 136 Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 10/61 (16%), Positives = 27/61 (44%) Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 P + + + +RG++ N N + EM MI + + + L++ + + + + Sbjct: 73 TTPPRLKYDPGNPLADQRGYVNLPNVNPVEEMADMISAARSYQTNVELMNTAKNLLQKTL 132 Query: 239 R 239 + Sbjct: 133 Q 133 >gi|91792662|ref|YP_562313.1| flagellar basal body rod protein FlgC [Shewanella denitrificans OS217] gi|91714664|gb|ABE54590.1| flagellar basal-body rod protein FlgC [Shewanella denitrificans OS217] Length = 138 Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 20/43 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 GF+ N N M EM MI ++ + + D + + + +R Sbjct: 93 GFIYKPNVNVMEEMADMISASRSYQMNVQVADATKTMLQQTLR 135 Score = 36.4 bits (82), Expect = 3.5, Method: Composition-based stats. Identities = 14/95 (14%), Positives = 31/95 (32%), Gaps = 9/95 (9%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56 F++ + A RL+T A N++N D+V +R F + + + Sbjct: 5 NIFDVSGSGMAAQSIRLNTTASNIANADSVSSSVDKTYRARHPIFEAELNKAHDQQNGTK 64 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA 91 + + + + +GD + Sbjct: 65 ---GVQVRAIVESDKPLLKEYSPSHPMADGDGFIY 96 >gi|296134284|ref|YP_003641531.1| flagellar hook-associated protein FlgK [Thermincola sp. JR] gi|296032862|gb|ADG83630.1| flagellar hook-associated protein FlgK [Thermincola potens JR] Length = 479 Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 16/43 (37%) Query: 200 EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 E S + EM MI +N+ I ++ + + + Sbjct: 433 EVSGVSLDEEMTNMIKFQHAYNAAARTITAMDEMLDTIVNRLG 475 Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 19/40 (47%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 NIG A A ++ L A N++N +T GF + + Sbjct: 7 GLNIGRQALQAQQRALDVTAHNIANANTEGFSRQRAVMAT 46 >gi|157376210|ref|YP_001474810.1| flagellar hook-associated protein FlgK [Shewanella sediminis HAW-EB3] gi|157318584|gb|ABV37682.1| flagellar hook-associated protein FlgK [Shewanella sediminis HAW-EB3] Length = 638 Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 10/50 (20%), Positives = 21/50 (42%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51 NI LA + +L+ ++N++N +T G+ + S + Sbjct: 3 MNLLNIARTGVLASQSQLAVTSNNIANANTQGYHRQVAEQSSLESQRAGS 52 Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats. Identities = 4/38 (10%), Positives = 11/38 (28%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S N E ++ Q + + ++ + Sbjct: 598 SGVNIDEEAANLLRFQQAYQASARIMTTASEIFDTLFN 635 >gi|121997313|ref|YP_001002100.1| flagellar hook-associated protein FlgK [Halorhodospira halophila SL1] gi|121588718|gb|ABM61298.1| flagellar hook-associated protein FlgK [Halorhodospira halophila SL1] Length = 685 Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 22/40 (55%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 M G++ A ++ L+T + N+SN +T G+ +V+ Sbjct: 1 MVDILQTGISGLRASQRGLATTSHNISNVNTDGYSRQRVE 40 >gi|150388562|ref|YP_001318611.1| flagellar hook-associated protein FlgK [Alkaliphilus metalliredigens QYMF] gi|149948424|gb|ABR46952.1| flagellar hook-associated protein FlgK [Alkaliphilus metalliredigens QYMF] Length = 493 Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 9/38 (23%), Positives = 20/38 (52%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 + FN + A ++ L V N++N +T G+ +++ Sbjct: 6 SGFNTATSGIFASQRSLDVVGHNIANANTPGYSRQRLE 43 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 6/42 (14%), Positives = 17/42 (40%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 S + EM M+ +N+ ++ ++ + I + + Sbjct: 449 SGVSLDEEMANMVRFQHAYNASARMVTTMDEMIDVIINRMGT 490 >gi|291288218|ref|YP_003505034.1| flagellar basal-body rod protein FlgC [Denitrovibrio acetiphilus DSM 12809] gi|290885378|gb|ADD69078.1| flagellar basal-body rod protein FlgC [Denitrovibrio acetiphilus DSM 12809] Length = 134 Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 10/46 (21%), Positives = 25/46 (54%), Gaps = 1/46 (2%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G++ N N + EM M+ ++ + + TT++ ++ ++A+ I Sbjct: 88 GYVAYPNINPIEEMVNMLEASKSYEANTTVVSTAKQLAMKAL-EIG 132 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 15/101 (14%), Positives = 27/101 (26%), Gaps = 6/101 (5%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDIDQKISF 58 + A R+S ++ N++N +T G + V F +V+ + Sbjct: 7 LGVAGTGMSAQRIRISAISANLANANTTRTDDGGPYVRQDVIFKQVLEGELAGGVKVTEV 66 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 V K + K E A Sbjct: 67 VKDEKPPILKYEPGHPDADEEGYVAYPNINPIEEMVNMLEA 107 >gi|163785037|ref|ZP_02179764.1| flagellar hook-associated protein [Hydrogenivirga sp. 128-5-R1-1] gi|159879693|gb|EDP73470.1| flagellar hook-associated protein [Hydrogenivirga sp. 128-5-R1-1] Length = 166 Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 16/155 (10%), Positives = 50/155 (32%), Gaps = 5/155 (3%) Query: 88 AWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGE 147 ++ + I L+ + + G+ +S+ G P + + Sbjct: 9 NFYVQLYAKDIKLSPSIKIQND-TGNFISSIGGINNYTSLYNPEEKALLTTTTGLQIGST 67 Query: 148 ISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVK---RGFLE-DSN 203 + + L + + + ++ S I I + ++ + +E S Sbjct: 68 YYKLNSIDNLSLLDTKSFQELYTKKFTSEIGFEISDAKNRLDANKNLRDAVQSKIEEKSG 127 Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 N E+ ++ + + S +I+ ++ + + Sbjct: 128 VNVDEELVNLMKYQRAYQSAAKIINVTDELLQTIL 162 >gi|289679031|ref|ZP_06499921.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv. syringae FF5] Length = 124 Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 30/73 (41%), Gaps = 6/73 (8%) Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 G + ++ + P P D K G++ N N + EM MI ++ F + + Sbjct: 55 NGIIEDSSNLEARYEPNHPSAD------KDGYVYYPNVNVVEEMADMISASRSFQTNAEI 108 Query: 227 IDENEKSMLEAIR 239 ++ + M + + Sbjct: 109 MNTAKSMMQKVLT 121 >gi|229591865|ref|YP_002873984.1| flagellar hook-associated protein FlgK [Pseudomonas fluorescens SBW25] gi|229363731|emb|CAY51133.1| putative flagellar hook-associated protein [Pseudomonas fluorescens SBW25] Length = 682 Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 11/51 (21%), Positives = 24/51 (47%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 + NIG++ A + LS +++N++N +T G+ + S + Sbjct: 1 MSLLNIGMSGLNAAQGSLSVLSNNIANANTAGYSRQQTIQSANASNQYGGV 51 Score = 36.0 bits (81), Expect = 4.2, Method: Composition-based stats. Identities = 9/40 (22%), Positives = 18/40 (45%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 S N E G MI Q + + + +I +++ I ++ Sbjct: 643 SQVNLDEEAGDMIKFQQYYTASSQIIKAAQETFSTLINSL 682 >gi|121533766|ref|ZP_01665593.1| flagellar basal-body rod protein FlgB [Thermosinus carboxydivorans Nor1] gi|121307757|gb|EAX48672.1| flagellar basal-body rod protein FlgB [Thermosinus carboxydivorans Nor1] Length = 164 Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 11/68 (16%), Positives = 25/68 (36%) Query: 21 TVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTEL 80 +++N++N +T GF+ +V F E + N + + T Sbjct: 57 VISNNIANVNTPGFKRSEVHFEEQLKQALNAKSGLSRTHQRHIAAKGDDFSVEVITVNNT 116 Query: 81 DFALEGDA 88 + +G+ Sbjct: 117 AYRADGNN 124 >gi|295706287|ref|YP_003599362.1| flagellar basal-body rod protein FlgC [Bacillus megaterium DSM 319] gi|294803946|gb|ADF41012.1| flagellar basal-body rod protein FlgC [Bacillus megaterium DSM 319] Length = 149 Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 15/123 (12%), Positives = 39/123 (31%), Gaps = 3/123 (2%) Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 S V + V + V+ + + + Sbjct: 26 SNMANAETTRGTYVNGEWQPYKRKMVVMQSDRSPSFSSVLHSEINKNQNNGVKVTDIVED 85 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 N+ P + +G+++ N + + EM +I T+ + + T+ + N+ + Sbjct: 86 NTPFNLVYNPTHPDAND---QGYVQMPNVDPLKEMTDLISATRSYEANVTVFNTNKSILT 142 Query: 236 EAI 238 +A+ Sbjct: 143 KAL 145 Score = 35.6 bits (80), Expect = 5.6, Method: Composition-based stats. Identities = 10/28 (35%), Positives = 15/28 (53%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTV 32 NI +A A R+ V+ NM+N +T Sbjct: 7 MNITSSALTANRLRMDVVSSNMANAETT 34 >gi|291288372|ref|YP_003505188.1| flagellar hook-associated protein FlgK [Denitrovibrio acetiphilus DSM 12809] gi|290885532|gb|ADD69232.1| flagellar hook-associated protein FlgK [Denitrovibrio acetiphilus DSM 12809] Length = 584 Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 4/40 (10%), Positives = 18/40 (45%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 + EM ++ + F + + I ++ + + + ++ + Sbjct: 542 VSMDEEMTNLMKFQRAFEASSRFITVVDEMLEKLVNSLGT 581 Score = 50.3 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 12/88 (13%), Positives = 27/88 (30%), Gaps = 3/88 (3%) Query: 1 MQTSFN---IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS 57 M + G++ A + + +N+SN +T G+ +V + Sbjct: 1 MSNLMHIFSTGVSGLFASQAGIDVTGNNISNVNTEGYSRQRVVLETANPEKNSQGVFGRG 60 Query: 58 FVASGKEYLSKEVGSFISTGTELDFALE 85 E + ++ + D A Sbjct: 61 VSVETVERIYDDMLASSIRNESSDLAYY 88 >gi|167034946|ref|YP_001670177.1| flagellar basal body rod protein FlgC [Pseudomonas putida GB-1] gi|166861434|gb|ABY99841.1| flagellar basal-body rod protein FlgC [Pseudomonas putida GB-1] Length = 147 Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N + EM MI ++ F + L++ + M + + Sbjct: 102 GYVYYPNVNVVEEMADMISASRAFQTNAELMNTAKSMMQKVLT 144 Score = 41.8 bits (96), Expect = 0.083, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 6/56 (10%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQ 54 FNI + A RL+TVA N++N +TV +R F+ + Q Sbjct: 7 FNIAGSGMSAQNTRLNTVASNIANAETVSSSIDQTYRARHPVFATTFQNAQAGGSQ 62 >gi|261253616|ref|ZP_05946189.1| flagellar basal-body rod protein FlgC [Vibrio orientalis CIP 102891] gi|260937007|gb|EEX92996.1| flagellar basal-body rod protein FlgC [Vibrio orientalis CIP 102891] Length = 138 Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 23/43 (53%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N M EM MI ++ + + + D +++ +L ++ Sbjct: 93 GYIYKPNVNVMEEMANMISASRSYQTNVQVADASKQMLLRTLQ 135 >gi|225850273|ref|YP_002730507.1| flagellar basal-body rod protein FlgC [Persephonella marina EX-H1] gi|225645322|gb|ACO03508.1| flagellar basal-body rod protein FlgC [Persephonella marina EX-H1] Length = 136 Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 8/48 (16%), Positives = 24/48 (50%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 + G++ N + + EM M+ + + + T + ++ +L+++ I Sbjct: 88 QNGYVAYPNVDPLREMVDMMSAIRTYEANLTAFNTHKDMLLKSLELIR 135 Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 13/109 (11%), Positives = 25/109 (22%), Gaps = 10/109 (9%) Query: 1 MQ-TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDID 53 M + + A R+ + N++N ++ G +R F V+ Sbjct: 1 MIFKGLEVSVTGMAAQRIRIDITSSNLANVNSTRTEDGQPYRRKVPVFQAVLDNQTKTPV 60 Query: 54 QK---ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 K + + K S A Sbjct: 61 YKVKIPEVIEDPSPFKLKFDPSHPDADQNGYVAYPNVDPLREMVDMMSA 109 >gi|119775452|ref|YP_928192.1| flagellar basal body rod protein FlgC [Shewanella amazonensis SB2B] gi|119767952|gb|ABM00523.1| flagellar basal-body rod protein FlgC [Shewanella amazonensis SB2B] Length = 137 Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 GF+ N N M EM MI ++ + + D + +++ +R Sbjct: 92 GFIYKPNVNVMEEMADMISASRSYQMNVQVADTAKSMLMQTLR 134 Score = 40.6 bits (93), Expect = 0.18, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 26/86 (30%), Gaps = 6/86 (6%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56 FN+ + A RL+T A N++N D+V +R F + + Sbjct: 5 NIFNVSGSGMSAQSVRLNTTASNIANADSVSSSVDKTYRARHPVFEAELAKASQQQSARG 64 Query: 57 SFVASGKEYLSKEVGSFISTGTELDF 82 V E + D Sbjct: 65 VNVKGIVESDKPLQKEYNPDHPMADA 90 >gi|291277450|ref|YP_003517222.1| flagellar basal-body rod protein [Helicobacter mustelae 12198] gi|290964644|emb|CBG40498.1| flagellar basal-body rod protein [Helicobacter mustelae 12198] Length = 164 Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 9/47 (19%), Positives = 19/47 (40%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G++ N N + EM +I T+ + + + AI + + Sbjct: 118 GYVAYPNVNPVVEMADLIEATRAYQANVAAFQSAKNMANNAITMLQA 164 Score = 41.8 bits (96), Expect = 0.081, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 22/49 (44%), Gaps = 6/49 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44 +SF+I A R + ++ N++N +T G +R +V F Sbjct: 4 LSSFDISGYGLSAQRFRTNIISSNIANANTTRTDEGGPYRRQEVVFKAF 52 >gi|71280491|ref|YP_268220.1| flagellar basal-body rod protein FlgC [Colwellia psychrerythraea 34H] gi|71146231|gb|AAZ26704.1| flagellar basal-body rod protein FlgC [Colwellia psychrerythraea 34H] Length = 143 Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N + EM MI ++ + + L + + + + ++ Sbjct: 97 GYIYKPNVNVIEEMTNMISASRSYQTNVQLAESAKNMLNKTLQ 139 Score = 36.4 bits (82), Expect = 4.0, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 32/103 (31%), Gaps = 7/103 (6%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKF-SEVVGAIKNDIDQK 55 F+I + A RL+T A N++N D+V +R F + + A Sbjct: 5 NVFDITGSGMSAQSVRLNTTASNIANADSVSSSADKTYRARHPVFAAAMQEAAAGQGKSD 64 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98 S V + + + D + + I Sbjct: 65 GSGVGVNVLGIVESDKPLNVEYAPSHPMADKDGYIYKPNVNVI 107 >gi|68164540|gb|AAY87269.1| predicted flagellar hook-associated protein 1 [uncultured bacterium BAC17H8] Length = 1404 Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 22/44 (50%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44 M F+IG + + Q L+ N++N +T G++ + E+ Sbjct: 1 MANLFDIGRSGLNSYRQGLAITGQNIANINTDGYKRRGAELEEL 44 >gi|16125152|ref|NP_419716.1| flagellar hook-associated protein FlaN [Caulobacter crescentus CB15] gi|221233880|ref|YP_002516316.1| flagellar hook-associated protein FlaN [Caulobacter crescentus NA1000] gi|13422164|gb|AAK22884.1| flagellar hook-associated protein FlaN, putative [Caulobacter crescentus CB15] gi|220963052|gb|ACL94408.1| flagellar hook-associated protein FlaN [Caulobacter crescentus NA1000] Length = 703 Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 9/46 (19%), Positives = 20/46 (43%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50 + + +A + L +DN++N +T G+ V S ++ Sbjct: 7 MSTATSGMMAAQTGLRVTSDNIANVNTTGYVRKTVSQSNLLSNGMG 52 Score = 34.8 bits (78), Expect = 9.6, Method: Composition-based stats. Identities = 7/30 (23%), Positives = 11/30 (36%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 N E+ + Q FN+ LI + Sbjct: 665 VNLDEELINLTTYQQAFNASARLIQATKDM 694 >gi|148546704|ref|YP_001266806.1| flagellar basal body rod protein FlgC [Pseudomonas putida F1] gi|148510762|gb|ABQ77622.1| flagellar basal-body rod protein FlgC [Pseudomonas putida F1] Length = 147 Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N + EM MI ++ F + L++ + M + + Sbjct: 102 GYVYYPNVNVVEEMADMISASRAFQTNAELMNTAKSMMQKVLT 144 Score = 41.4 bits (95), Expect = 0.10, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 6/56 (10%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQ 54 FNI + A RL+TVA N++N +TV +R F+ + Q Sbjct: 7 FNIAGSGMSAQNTRLNTVASNIANAETVSSSIDQTYRARHPVFATTFQNAQAGSSQ 62 >gi|322807049|emb|CBZ04623.1| flagellar hook-associated protein FlgK [Clostridium botulinum H04402 065] Length = 630 Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 10/39 (25%), Positives = 21/39 (53%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 NIG + A + ++T + N++N +T G+ +V+ Sbjct: 8 LNIGKSGMFAQQGAINTTSHNIANANTEGYSRQRVELQT 46 Score = 39.9 bits (91), Expect = 0.31, Method: Composition-based stats. Identities = 4/40 (10%), Positives = 14/40 (35%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 S + E ++ + + +I ++ + I + Sbjct: 589 SGVSLDEEFANLVQFNHCYQANAKIISTVDQLLDVVINGL 628 >gi|296103613|ref|YP_003613759.1| Flagellar basal-body rod protein, FlgC [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058072|gb|ADF62810.1| Flagellar basal-body rod protein, FlgC [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 134 Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 9/44 (20%), Positives = 22/44 (50%) Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +G++ N N M EM I ++ + + +++ + ML+ + Sbjct: 88 QGYVRMPNVNVMNEMVNTISASRSYQANVEVMNSAKSLMLKTLT 131 Score = 36.0 bits (81), Expect = 5.1, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 6/44 (13%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFS 42 F+I +A A +RL+ A NM+N D+V +R +V FS Sbjct: 7 FDISGSAMAAQSRRLNVSASNMANADSVAGPDGQPYRARQVVFS 50 >gi|3493240|gb|AAC33326.1| hook associated protein I homolog [Caulobacter crescentus CB15] Length = 397 Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 9/46 (19%), Positives = 20/46 (43%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50 + + +A + L +DN++N +T G+ V S ++ Sbjct: 7 MSTATSGMMAAQTGLRVTSDNIANVNTTGYVRKTVSQSNLLSNGMG 52 >gi|311992325|gb|ADQ26736.1| proximal rod protein [Aeromonas hydrophila] Length = 138 Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 22/43 (51%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 GF+ N N + EM MI+ ++ + + + D +K + + + Sbjct: 92 GFIFKPNVNMVEEMADMINASRSYQTNVQVADSAKKMLQQTLN 134 Score = 36.4 bits (82), Expect = 3.6, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 6/55 (10%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKND 51 F+I +A A RL+TVA NM+N D+V + + F+ + +D Sbjct: 4 KVFDIAGSAMSAQSVRLNTVASNMANADSVSSSVEKTYHARRPIFAAQLDQAMSD 58 >gi|145298489|ref|YP_001141330.1| flagellar basal body rod protein FlgC [Aeromonas salmonicida subsp. salmonicida A449] gi|142851261|gb|ABO89582.1| flagellar basal body rod protein FlgC [Aeromonas salmonicida subsp. salmonicida A449] Length = 139 Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 22/43 (51%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N + EM MI+ ++ + + + D +K + + + Sbjct: 93 GYIFKPNVNMVEEMADMINASRSYQTNVQVADSAKKMLQQTLN 135 Score = 36.4 bits (82), Expect = 3.2, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56 F+I +A A RL+TVA NM+N D+V + + F+ + +D + Sbjct: 5 KVFDIAGSAMSAQSVRLNTVASNMANADSVSSSVEKTYHARRPIFAAQLDQAMSDKQSSV 64 >gi|294500941|ref|YP_003564641.1| flagellar basal-body rod protein FlgC [Bacillus megaterium QM B1551] gi|294350878|gb|ADE71207.1| flagellar basal-body rod protein FlgC [Bacillus megaterium QM B1551] Length = 149 Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 25/43 (58%) Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 +G+++ N + + EM +I T+ + + T+ + N+ + +A+ Sbjct: 103 QGYVKMPNVDPLKEMTDLISATRSYEANVTVFNTNKSILTKAL 145 Score = 37.5 bits (85), Expect = 1.7, Method: Composition-based stats. Identities = 10/30 (33%), Positives = 16/30 (53%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV 32 + NI +A A R+ V+ NM+N +T Sbjct: 5 RNMNITSSALTANRLRMDVVSSNMANAETT 34 >gi|149194904|ref|ZP_01871998.1| flagellar hook-associated protein [Caminibacter mediatlanticus TB-2] gi|149135063|gb|EDM23545.1| flagellar hook-associated protein [Caminibacter mediatlanticus TB-2] Length = 717 Score = 52.9 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 33/80 (41%), Gaps = 2/80 (2%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV--VGAIKNDIDQKISFVA 60 +S + L+ A + + T ++N+SN + + FS + + +I DI ++ Sbjct: 5 SSLSTALSGLNAHQTAIQTTSNNISNASNPDYVRERAVFSTLPPINSIPGDIGTGVNISK 64 Query: 61 SGKEYLSKEVGSFISTGTEL 80 + + + T +L Sbjct: 65 IYRITDTFVFNQMVKTSQDL 84 Score = 42.9 bits (99), Expect = 0.034, Method: Composition-based stats. Identities = 4/47 (8%), Positives = 16/47 (34%) Query: 191 GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 +++ + S N E+ + + + + +I + + Sbjct: 666 FTSIQNQYYSISGVNIDEELINLEKFQRGYQANAKVITTINQMLDAL 712 >gi|311031940|ref|ZP_07710030.1| flagellar hook-associated protein FlgK [Bacillus sp. m3-13] Length = 620 Score = 52.9 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 18/38 (47%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKF 41 S + + + L TV N++N +T G+ +V F Sbjct: 7 SLEVARRGLVTQQTALQTVGHNIANANTPGYTRQRVNF 44 Score = 49.9 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 8/41 (19%), Positives = 17/41 (41%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S + EM MI +N+ +I ++ + + I + Sbjct: 576 SGVSLDEEMTSMIQYQHAYNASARMITLTDELLDKIINGMG 616 >gi|304404241|ref|ZP_07385903.1| flagellar basal-body rod protein FlgB [Paenibacillus curdlanolyticus YK9] gi|304347219|gb|EFM13051.1| flagellar basal-body rod protein FlgB [Paenibacillus curdlanolyticus YK9] Length = 136 Score = 52.9 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 33/67 (49%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69 A + E R ++DN++N DT F+ +V F +++ ++KI+ + + ++ Sbjct: 14 TAIQSAETRQKVISDNIANVDTPNFKRSEVLFEDLLADAMGTNEKKIAGIRTNARHIPIG 73 Query: 70 VGSFIST 76 S I T Sbjct: 74 QSSSIPT 80 >gi|294140182|ref|YP_003556160.1| flagellar basal-body rod protein FlgC [Shewanella violacea DSS12] gi|293326651|dbj|BAJ01382.1| flagellar basal-body rod protein FlgC [Shewanella violacea DSS12] Length = 138 Score = 52.9 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 20/43 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 GF+ N N M EM MI ++ + + + + + + +R Sbjct: 93 GFIYKPNVNVMEEMANMISASRSYQMNVQVAEAAKSMLQQTLR 135 Score = 38.7 bits (88), Expect = 0.63, Method: Composition-based stats. Identities = 16/95 (16%), Positives = 31/95 (32%), Gaps = 9/95 (9%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56 FN+ + A RL+T A N++N D+V +R F + Sbjct: 5 NIFNVAGSGMSAQSIRLNTTASNIANADSVSSSVDKTYRARHPIFEAEMAKASYQQQSSP 64 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA 91 S + + + + + +GD + Sbjct: 65 SV---KVKGIVESDAPLLKEYSPNHPMADGDGFIY 96 >gi|295399807|ref|ZP_06809788.1| flagellar basal-body rod protein FlgC [Geobacillus thermoglucosidasius C56-YS93] gi|312111681|ref|YP_003989997.1| flagellar basal-body rod protein FlgC [Geobacillus sp. Y4.1MC1] gi|294978210|gb|EFG53807.1| flagellar basal-body rod protein FlgC [Geobacillus thermoglucosidasius C56-YS93] gi|311216782|gb|ADP75386.1| flagellar basal-body rod protein FlgC [Geobacillus sp. Y4.1MC1] Length = 150 Score = 52.9 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 8/48 (16%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 + G++ N + + EM ++ T+ + + T+ + + +++A+ I Sbjct: 103 RNGYVRLPNVDPLKEMVDLMSATRSYEANVTVFNATKGMLMKAL-EIG 149 Score = 44.9 bits (104), Expect = 0.009, Method: Composition-based stats. Identities = 24/116 (20%), Positives = 35/116 (30%), Gaps = 17/116 (14%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV------G----FRTIKVK-------FSE 43 M + +I +A A R+ V+ NM+N DT G +R V FS Sbjct: 3 MFQNLDITASALTAQRLRMDVVSSNMANVDTTRARFVNGQWEPYRRKLVVMEPRQEGFST 62 Query: 44 VVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 + A N D V K + + D G P + Sbjct: 63 YLQAAMNSRDSVGGGVRVTKIVEDPAPFKLVYDPSHPDADRNGYVRLPNVDPLKEM 118 >gi|87119678|ref|ZP_01075575.1| Flagellar basal-body rod protein FlgC [Marinomonas sp. MED121] gi|86165154|gb|EAQ66422.1| Flagellar basal-body rod protein FlgC [Marinomonas sp. MED121] Length = 149 Score = 52.9 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 9/44 (20%), Positives = 22/44 (50%) Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ SN N + EM M+ ++ F + +++ + M + + Sbjct: 102 SGYVYYSNVNPVEEMADMMSASRSFQTNVEVMNSAKSMMQKMLT 145 Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 6/58 (10%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDID 53 F I +A A RL+TVA N++N D+V +R K FS ++ Sbjct: 4 NNIFAISGSAMSAQTIRLNTVASNIANADSVASSEDQTYRARKPVFSTMMQESMRGYG 61 >gi|121596115|ref|YP_988011.1| flagellar basal-body rod protein FlgC [Acidovorax sp. JS42] gi|222112270|ref|YP_002554534.1| flagellar basal-body rod protein flgc [Acidovorax ebreus TPSY] gi|120608195|gb|ABM43935.1| flagellar basal-body rod protein FlgC [Acidovorax sp. JS42] gi|221731714|gb|ACM34534.1| flagellar basal-body rod protein FlgC [Acidovorax ebreus TPSY] Length = 134 Score = 52.9 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 25/43 (58%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ SN N++ EM MI ++ + + +++ + +L+ ++ Sbjct: 89 GYVTHSNVNAVEEMVNMISASRSYQNNVEVMNTAKTLLLKTLQ 131 Score = 41.8 bits (96), Expect = 0.083, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 39/109 (35%), Gaps = 6/109 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQ 54 M + FN+ +A A QRL+ VA N++N D V ++ +V F ++ Sbjct: 3 MFSIFNVSGSAISAQSQRLNVVASNLANVDAVAGPDGQAYKARQVVFQTAPMGPESAAGV 62 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103 ++S + + + + + E I +R Sbjct: 63 RVSSIQESDQPGRRVHDPANPMADAEGYVTHSNVNAVEEMVNMISASRS 111 >gi|146296674|ref|YP_001180445.1| flagellar hook-associated protein FlgK [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145410250|gb|ABP67254.1| flagellar hook-associated protein FlgK [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 525 Score = 52.9 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 21/192 (10%), Positives = 56/192 (29%), Gaps = 11/192 (5%) Query: 51 DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTD 110 I ++ + + L ++ + G L+ G +F + R + Sbjct: 341 GIPYYLNRLNEFAQKLIEKFNELHTQGWSLNGQNTGINFFEPPVSQTFFYARYIKVSDAI 400 Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170 L + + Y V ++ + + N + + + ++ SQG Sbjct: 401 MNDLNNIATTYDVNNLPGGNDLVVDMLRLRNDTSIFKEGRFEDFLKSLISNLGVDSQG-- 458 Query: 171 RRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + N + + G + EM +I F + +I+ Sbjct: 459 ---AKNFAENQKVMVTQLDNRRQAVSG------VSIDEEMTNLIKYQHGFQASARMINAF 509 Query: 231 EKSMLEAIRNIA 242 ++ + + + Sbjct: 510 DEMLDVIVNRLG 521 Score = 44.9 bits (104), Expect = 0.010, Method: Composition-based stats. Identities = 10/77 (12%), Positives = 22/77 (28%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 I + L + N++N T G+ + + + + I V G Sbjct: 5 GLEIARTGIYVNRKGLEVTSHNVANASTPGYTRQVLNVKSIPPSNRVGIYDPKFQVGMGA 64 Query: 64 EYLSKEVGSFISTGTEL 80 + S + + Sbjct: 65 DVQSLVQIRDMFLDMQY 81 >gi|172057890|ref|YP_001814350.1| flagellar basal-body rod protein FlgC [Exiguobacterium sibiricum 255-15] gi|171990411|gb|ACB61333.1| flagellar basal-body rod protein FlgC [Exiguobacterium sibiricum 255-15] Length = 132 Score = 52.9 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 9/46 (19%), Positives = 25/46 (54%), Gaps = 1/46 (2%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G+++ N + + EM M+ T+ + + T ++ + +++A+ I Sbjct: 87 GYVKMPNVDLLKEMVDMMGATRSYEANVTALNATKAMLVKAM-EIG 131 Score = 48.7 bits (114), Expect = 7e-04, Method: Composition-based stats. Identities = 10/32 (31%), Positives = 15/32 (46%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32 M + F+ A RL TV+ N++N T Sbjct: 3 MFSGFHTSATGLTAQRLRLDTVSANIANAQTT 34 >gi|332982896|ref|YP_004464337.1| flagellar hook-associated protein FlgK [Mahella australiensis 50-1 BON] gi|332700574|gb|AEE97515.1| flagellar hook-associated protein FlgK [Mahella australiensis 50-1 BON] Length = 495 Score = 52.9 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 3/56 (5%) Query: 1 MQTSFN---IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 M ++F IG +A +Q L+ A N++N T G+ +V +V + Sbjct: 1 MSSTFYGLQIGKSAINLQQQALNVTAHNIANAGTPGYTRQQVISEAIVPPSTLGMG 56 Score = 44.1 bits (102), Expect = 0.017, Method: Composition-based stats. Identities = 6/41 (14%), Positives = 16/41 (39%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S E+ M+ Q +N+ +I ++ + + + Sbjct: 451 SGVLLDEELMNMVKFQQSYNAAARVITAMDEMLDVLVNRVG 491 >gi|28897550|ref|NP_797155.1| flagellar basal body rod protein FlgC [Vibrio parahaemolyticus RIMD 2210633] gi|153839687|ref|ZP_01992354.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus AQ3810] gi|260364609|ref|ZP_05777211.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus K5030] gi|260878286|ref|ZP_05890641.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus AN-5034] gi|260898116|ref|ZP_05906612.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus Peru-466] gi|260901951|ref|ZP_05910346.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus AQ4037] gi|5361006|gb|AAD42913.1|U12817_7 polar flagellar FlgC homolog [Vibrio parahaemolyticus] gi|28805762|dbj|BAC59039.1| polar flagellar FlgC [Vibrio parahaemolyticus RIMD 2210633] gi|149746797|gb|EDM57785.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus AQ3810] gi|308086105|gb|EFO35800.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus Peru-466] gi|308090161|gb|EFO39856.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus AN-5034] gi|308106781|gb|EFO44321.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus AQ4037] gi|308115115|gb|EFO52655.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus K5030] gi|328473455|gb|EGF44303.1| flagellar basal body rod protein FlgC [Vibrio parahaemolyticus 10329] Length = 137 Score = 52.9 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 23/43 (53%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N M EM MI ++ + + + D +++ +L ++ Sbjct: 92 GYIYKPNVNVMEEMANMISASRAYQTNVQVADSSKQMLLRTLQ 134 Score = 38.3 bits (87), Expect = 0.99, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 26/81 (32%), Gaps = 6/81 (7%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56 FN+ +A A RL+T + N++N D+V ++ F + D Sbjct: 5 NVFNVTGSAMSAESVRLNTTSSNLANADSVSSSAKDTYKARHAVFGAELSNAMRGGDTVP 64 Query: 57 SFVASGKEYLSKEVGSFISTG 77 V E + Sbjct: 65 VKVLGIVESDKPLSAEYNPDH 85 >gi|332981429|ref|YP_004462870.1| flagellar basal-body rod protein FlgC [Mahella australiensis 50-1 BON] gi|332699107|gb|AEE96048.1| flagellar basal-body rod protein FlgC [Mahella australiensis 50-1 BON] Length = 129 Score = 52.9 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 20/41 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 G++ N + EM M+ T+ + + T+ID + + A Sbjct: 84 GYVRMPNVDVTEEMVDMVSATRSYEANVTVIDAAKNMAMRA 124 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 7/32 (21%), Positives = 15/32 (46%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32 M + N + A R+ ++ N++N +T Sbjct: 3 MFDAINNSASGLTAQRLRMDIISQNIANANTT 34 >gi|157146228|ref|YP_001453547.1| flagellar basal body rod protein FlgC [Citrobacter koseri ATCC BAA-895] gi|157083433|gb|ABV13111.1| hypothetical protein CKO_01985 [Citrobacter koseri ATCC BAA-895] Length = 134 Score = 52.9 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 6/43 (13%), Positives = 22/43 (51%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G+++ N + + EM + ++ + + +++ + ML+ + Sbjct: 89 GYVKMPNVDVVGEMVNTMSASRSYQANVEVLNTVKSMMLKTLT 131 Score = 39.1 bits (89), Expect = 0.62, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 6/47 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42 F+I +A A +RL+ A N++N G +R +V F Sbjct: 4 LNIFDIAGSALTAQSKRLNVAASNLANADSVTGPDGQPYRAKQVVFQ 50 >gi|323495379|ref|ZP_08100456.1| flagellar basal body rod protein FlgC [Vibrio brasiliensis LMG 20546] gi|323310302|gb|EGA63489.1| flagellar basal body rod protein FlgC [Vibrio brasiliensis LMG 20546] Length = 138 Score = 52.9 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 23/43 (53%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N M EM MI ++ + + L D +++ +L ++ Sbjct: 93 GYIYKPNVNVMEEMANMISASRSYQTNVQLADASKQMLLRTLQ 135 >gi|317051987|ref|YP_004113103.1| flagellar basal body rod protein [Desulfurispirillum indicum S5] gi|316947071|gb|ADU66547.1| flagellar basal body rod protein [Desulfurispirillum indicum S5] Length = 129 Score = 52.9 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 16/83 (19%), Positives = 28/83 (33%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M +F +A R S A N++N +T GF++ +V +E V I Sbjct: 1 MVDAFYNAASAIKTYGFRQSASAHNVANVNTDGFKSQRVDTAEGVSGGVRPTGVSIDKSH 60 Query: 61 SGKEYLSKEVGSFISTGTELDFA 83 + + + A Sbjct: 61 GPFRPSEFPADTVSFSADAIAMA 83 Score = 38.3 bits (87), Expect = 0.86, Method: Composition-based stats. Identities = 7/44 (15%), Positives = 17/44 (38%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G +E SN + E+ ++ T +I ++ + + Sbjct: 82 MAGLVEGSNTDITREIVNSSVNQYSVSANTGVIRSQDEMIGTLL 125 >gi|187778686|ref|ZP_02995159.1| hypothetical protein CLOSPO_02281 [Clostridium sporogenes ATCC 15579] gi|187772311|gb|EDU36113.1| hypothetical protein CLOSPO_02281 [Clostridium sporogenes ATCC 15579] Length = 624 Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 10/39 (25%), Positives = 21/39 (53%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 NIG + A + ++T + N++N +T G+ +V+ Sbjct: 11 LNIGKSGMFAQQGAINTTSHNIANANTEGYSRQRVELQT 49 Score = 39.9 bits (91), Expect = 0.34, Method: Composition-based stats. Identities = 4/40 (10%), Positives = 14/40 (35%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 S + E ++ + + +I ++ + I + Sbjct: 583 SGVSLDEEFANLVQFNHCYQANAKIISTVDQLLDVVINGL 622 >gi|134300249|ref|YP_001113745.1| flagellar basal-body rod protein FlgC [Desulfotomaculum reducens MI-1] gi|134052949|gb|ABO50920.1| flagellar basal-body rod protein FlgC [Desulfotomaculum reducens MI-1] Length = 145 Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 11/88 (12%), Positives = 29/88 (32%), Gaps = 9/88 (10%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVG---------FRTIKVKFSEVVGAIKNDIDQ 54 SF I + + RL +++N++N +T +R F+E + + Sbjct: 6 SFGISASGMTSERLRLDLISNNIANMNTPSRPNDPNSPVYRRRVPIFAEQLRQTISTKGV 65 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDF 82 + + ++++ Sbjct: 66 EPKGAGVRVKAITEDPAPPRIVNDPSHP 93 Score = 52.2 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G + N N + EM MI ++ + + T ++ + L+A+ Sbjct: 99 GNVAYPNINIVNEMVDMITASRTYEANVTALNAAKSMALKAL 140 >gi|114562340|ref|YP_749853.1| flagellar basal body rod protein FlgC [Shewanella frigidimarina NCIMB 400] gi|114333633|gb|ABI71015.1| flagellar basal-body rod protein FlgC [Shewanella frigidimarina NCIMB 400] Length = 138 Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 20/43 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 GF+ N N M EM MI ++ + + D + + + +R Sbjct: 93 GFIYKPNVNVMEEMADMISASRSYQMNVQVADATKSMLQQTLR 135 Score = 39.9 bits (91), Expect = 0.33, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 29/86 (33%), Gaps = 7/86 (8%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFS-EVVGAIKNDIDQK 55 FN+ + A RL+T A N++N D+V +R F E++ A Sbjct: 5 NIFNVSGSGMSAQSVRLNTTASNIANADSVSSSVDKTYRARHPVFEAEMLKANSQQNSSP 64 Query: 56 ISFVASGKEYLSKEVGSFISTGTELD 81 V E + + D Sbjct: 65 GVTVKGIVESDKPLLKEYSPDHPMAD 90 >gi|197104256|ref|YP_002129633.1| flagellar hook-associated protein [Phenylobacterium zucineum HLK1] gi|196477676|gb|ACG77204.1| flagellar hook-associated protein [Phenylobacterium zucineum HLK1] Length = 700 Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 31/214 (14%), Positives = 67/214 (31%), Gaps = 14/214 (6%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGF-RTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + A + L V+DN++N +T G+ R V+ VV + + + + Sbjct: 7 LQTAASGLNAAQASLRAVSDNIANVNTPGYVRKAVVQQPLVVDGVGMGVRVQGMKRITDD 66 Query: 64 EYLSKEVGSFISTGTELDFALE---GDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 S + + + A + F S G +R G+ +A+ Sbjct: 67 YLQSASLTAASDSSRWAAVAQYLDNAQSLFGDPSSPGFFFSRLDEI----YGAFATAADD 122 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 + S I Q ++S+ G + T +D + + + + + Sbjct: 123 PSSSLLRSQSIANIQDFLAEADRINSQLSELGGTVETRITADIDRANDLLAQVDRLNAEI 182 Query: 181 IPPTPLEDLSGVT--VKRGFL-EDS---NANSMY 208 + + + ++ L E S N Sbjct: 183 SRAKMVNADASGSENIQSQLLDELSSLMNVRVAR 216 Score = 39.9 bits (91), Expect = 0.35, Method: Composition-based stats. Identities = 11/66 (16%), Positives = 23/66 (34%), Gaps = 2/66 (3%) Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 N+ + + L+ T +R +E N E+ M Q FN+ ++ + Sbjct: 634 RNAASAETRKESAAAVLNEATARRQSVEG--VNLDEELVNMTTYQQAFNASARMVQAAKD 691 Query: 233 SMLEAI 238 + Sbjct: 692 LFDVLL 697 >gi|163738064|ref|ZP_02145480.1| flagellar basal-body rod protein FlgC [Phaeobacter gallaeciensis BS107] gi|163742540|ref|ZP_02149926.1| flagellar basal-body rod protein FlgC [Phaeobacter gallaeciensis 2.10] gi|161384125|gb|EDQ08508.1| flagellar basal-body rod protein FlgC [Phaeobacter gallaeciensis 2.10] gi|161388680|gb|EDQ13033.1| flagellar basal-body rod protein FlgC [Phaeobacter gallaeciensis BS107] Length = 130 Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 23/42 (54%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44 S ++ +A A RL V++N+SN DT G+R V F V Sbjct: 6 KSLSVSASALKAQASRLRHVSENISNADTPGYRRKTVPFEAV 47 Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 6/38 (15%), Positives = 15/38 (39%) Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 G E SN + M E+ + + + + ++ + Sbjct: 83 SGHYEGSNVDLMIEIADAREAQRSYEANLKMFEQGRQM 120 >gi|123442786|ref|YP_001006763.1| flagellar basal body rod protein FlgC [Yersinia enterocolitica subsp. enterocolitica 8081] gi|332161320|ref|YP_004297897.1| flagellar basal body rod protein FlgC [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|2494525|sp|Q56894|FLGC_YEREN RecName: Full=Flagellar basal-body rod protein flgC gi|793899|emb|CAA88193.1| flgC [Yersinia enterocolitica] gi|122089747|emb|CAL12600.1| flagellar basal-body rod protein FlgC [Yersinia enterocolitica subsp. enterocolitica 8081] gi|325665550|gb|ADZ42194.1| flagellar basal body rod protein FlgC [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330860608|emb|CBX70905.1| flagellar basal-body rod protein flgC [Yersinia enterocolitica W22703] Length = 134 Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 20/43 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N + EM I ++ + + +++ + ML+ + Sbjct: 89 GYVRMPNVDVTGEMVNTISASRSYQANVEVLNTTKSLMLKTLT 131 Score = 38.3 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 22/58 (37%), Gaps = 6/58 (10%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSEVVGAIKNDID 53 F+I +A A QRL+ A NM+N G +R +V F + Sbjct: 4 LNIFDIAGSALSAQSQRLNVSASNMANADSVTGPDGQPYRAKQVVFQVAAQPGQETGG 61 >gi|238785499|ref|ZP_04629482.1| Flagellar basal-body rod protein flgC [Yersinia bercovieri ATCC 43970] gi|238799105|ref|ZP_04642561.1| Flagellar basal-body rod protein flgC [Yersinia mollaretii ATCC 43969] gi|238713601|gb|EEQ05630.1| Flagellar basal-body rod protein flgC [Yersinia bercovieri ATCC 43970] gi|238717052|gb|EEQ08912.1| Flagellar basal-body rod protein flgC [Yersinia mollaretii ATCC 43969] Length = 134 Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 20/43 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N + EM I ++ + + +++ + ML+ + Sbjct: 89 GYVRMPNVDVTGEMVNTISASRSYQANVEVLNTTKSLMLKTLT 131 Score = 39.1 bits (89), Expect = 0.61, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 26/68 (38%), Gaps = 6/68 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSEVVGAIKNDIDQK 55 F+I +A A QRL+ A NM+N G +R +V F + + Sbjct: 4 LNIFDIAGSALSAQSQRLNVSASNMANADSVTGPDGQPYRAKQVVFQVAAQPGQETGGVR 63 Query: 56 ISFVASGK 63 +S V Sbjct: 64 VSQVVDDP 71 >gi|258511368|ref|YP_003184802.1| flagellar basal-body rod protein FlgB [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478094|gb|ACV58413.1| flagellar basal-body rod protein FlgB [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 134 Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 21/49 (42%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 +A A R + A+N++N T G++ V F ++ + D Sbjct: 9 SALDASTLRQAVYANNIANAGTPGYKRQDVAFETLLQSALGSGDSNALG 57 >gi|312135425|ref|YP_004002763.1| flagellar hook-associated protein flgk [Caldicellulosiruptor owensensis OL] gi|311775476|gb|ADQ04963.1| flagellar hook-associated protein FlgK [Caldicellulosiruptor owensensis OL] Length = 525 Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 18/173 (10%), Positives = 47/173 (27%), Gaps = 11/173 (6%) Query: 70 VGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASV 129 + G L+ G +F + R + L + + Y + Sbjct: 360 FNELHTQGWSLNGQNTGINFFEPPVGQTFFYARYIKVSDAIMNDLNNIATTYDASSLPGG 419 Query: 130 PIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL 189 + ++ N + + + ++ SQG + N + Sbjct: 420 NDLVVDMLKLRNDTSIFKEGRFEDFLKSLISNLGVDSQG-----AKNFAENQKVMVTQLD 474 Query: 190 SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 + G + EM +I F + +I+ ++ + + + Sbjct: 475 NRRQAVSG------VSIDEEMTNLIKYQHGFQASARMINAFDEMLDVIVNRLG 521 Score = 43.3 bits (100), Expect = 0.027, Method: Composition-based stats. Identities = 11/77 (14%), Positives = 21/77 (27%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 I + L + N++N T G+ + + K V G Sbjct: 5 GLEIARTGIFVNRKGLEVTSHNVANASTPGYTRQVLNVKSNPPSAKVGFYSPKFQVGMGA 64 Query: 64 EYLSKEVGSFISTGTEL 80 + S E + + Sbjct: 65 DVQSLEQIRNMFLDMQY 81 >gi|296452609|ref|ZP_06894303.1| flagellar hook-associated protein FlgK [Clostridium difficile NAP08] gi|296880979|ref|ZP_06904925.1| flagellar hook-associated protein FlgK [Clostridium difficile NAP07] gi|296258570|gb|EFH05471.1| flagellar hook-associated protein FlgK [Clostridium difficile NAP08] gi|296428000|gb|EFH13901.1| flagellar hook-associated protein FlgK [Clostridium difficile NAP07] Length = 436 Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 13/77 (16%), Positives = 33/77 (42%), Gaps = 4/77 (5%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE----VVGAIKNDIDQKISF 58 + N + + ++ + T++ N+SN DT G+ + +F+ + ++ N I + Sbjct: 6 SILNTANSGMNSHQKAIQTISHNISNLDTEGYSRQRTEFATNSPMYMPSLSNSIGRGQLG 65 Query: 59 VASGKEYLSKEVGSFIS 75 +++ SF Sbjct: 66 TGVHVTDVTRARNSFYD 82 Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 6/40 (15%), Positives = 17/40 (42%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 S + EM ++I + + + + ++ + + I I Sbjct: 396 SGVSLDEEMTELIKIQRSYQASAKVMSTAVQLLDVVINGI 435 >gi|22126392|ref|NP_669815.1| flagellar basal body rod protein FlgC [Yersinia pestis KIM 10] gi|45441411|ref|NP_992950.1| flagellar basal body rod protein FlgC [Yersinia pestis biovar Microtus str. 91001] gi|51596009|ref|YP_070200.1| flagellar basal body rod protein FlgC [Yersinia pseudotuberculosis IP 32953] gi|108807171|ref|YP_651087.1| flagellar basal body rod protein FlgC [Yersinia pestis Antiqua] gi|108812485|ref|YP_648252.1| flagellar basal body rod protein FlgC [Yersinia pestis Nepal516] gi|145598612|ref|YP_001162688.1| flagellar basal body rod protein FlgC [Yersinia pestis Pestoides F] gi|149366253|ref|ZP_01888288.1| flagellar basal-body rod protein FlgC [Yersinia pestis CA88-4125] gi|153947032|ref|YP_001401292.1| flagellar basal body rod protein FlgC [Yersinia pseudotuberculosis IP 31758] gi|162420507|ref|YP_001606471.1| flagellar basal body rod protein FlgC [Yersinia pestis Angola] gi|165926046|ref|ZP_02221878.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar Orientalis str. F1991016] gi|165938792|ref|ZP_02227347.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar Orientalis str. IP275] gi|166010857|ref|ZP_02231755.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar Antiqua str. E1979001] gi|166211044|ref|ZP_02237079.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar Antiqua str. B42003004] gi|167401147|ref|ZP_02306650.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167420240|ref|ZP_02311993.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425758|ref|ZP_02317511.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167469718|ref|ZP_02334422.1| flagellar basal-body rod protein FlgC [Yersinia pestis FV-1] gi|170024649|ref|YP_001721154.1| flagellar basal body rod protein FlgC [Yersinia pseudotuberculosis YPIII] gi|186895112|ref|YP_001872224.1| flagellar basal body rod protein FlgC [Yersinia pseudotuberculosis PB1/+] gi|218928920|ref|YP_002346795.1| flagellar basal body rod protein FlgC [Yersinia pestis CO92] gi|229896240|ref|ZP_04511410.1| flagellar basal-body rod protein FlgC [Yersinia pestis Pestoides A] gi|229897175|ref|ZP_04512331.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar Orientalis str. PEXU2] gi|229897901|ref|ZP_04513052.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar Orientalis str. India 195] gi|229902867|ref|ZP_04517984.1| flagellar basal-body rod protein FlgC [Yersinia pestis Nepal516] gi|270486647|ref|ZP_06203721.1| flagellar basal-body rod protein FlgC [Yersinia pestis KIM D27] gi|294504032|ref|YP_003568094.1| flagellar basal body rod protein [Yersinia pestis Z176003] gi|21959379|gb|AAM86066.1|AE013854_2 cell-proximal portion of basal-body rod protein [Yersinia pestis KIM 10] gi|45436272|gb|AAS61827.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar Microtus str. 91001] gi|51589291|emb|CAH20912.1| flagellar basal-body rod protein FlgC [Yersinia pseudotuberculosis IP 32953] gi|108776133|gb|ABG18652.1| flagellar basal-body rod protein FlgC [Yersinia pestis Nepal516] gi|108779084|gb|ABG13142.1| flagellar basal-body rod protein FlgC [Yersinia pestis Antiqua] gi|115347531|emb|CAL20440.1| flagellar basal-body rod protein FlgC [Yersinia pestis CO92] gi|145210308|gb|ABP39715.1| flagellar basal-body rod protein FlgC [Yersinia pestis Pestoides F] gi|149292666|gb|EDM42740.1| flagellar basal-body rod protein FlgC [Yersinia pestis CA88-4125] gi|152958527|gb|ABS45988.1| flagellar basal-body rod protein FlgC [Yersinia pseudotuberculosis IP 31758] gi|162353322|gb|ABX87270.1| flagellar basal-body rod protein FlgC [Yersinia pestis Angola] gi|165913406|gb|EDR32028.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar Orientalis str. IP275] gi|165922250|gb|EDR39427.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar Orientalis str. F1991016] gi|165990201|gb|EDR42502.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar Antiqua str. E1979001] gi|166208224|gb|EDR52704.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar Antiqua str. B42003004] gi|166961935|gb|EDR57956.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167049536|gb|EDR60944.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167055157|gb|EDR64954.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169751183|gb|ACA68701.1| flagellar basal-body rod protein FlgC [Yersinia pseudotuberculosis YPIII] gi|186698138|gb|ACC88767.1| flagellar basal-body rod protein FlgC [Yersinia pseudotuberculosis PB1/+] gi|229680314|gb|EEO76413.1| flagellar basal-body rod protein FlgC [Yersinia pestis Nepal516] gi|229688942|gb|EEO81007.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar Orientalis str. India 195] gi|229693512|gb|EEO83561.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701163|gb|EEO89192.1| flagellar basal-body rod protein FlgC [Yersinia pestis Pestoides A] gi|262361782|gb|ACY58503.1| flagellar basal body rod protein [Yersinia pestis D106004] gi|262366082|gb|ACY62639.1| flagellar basal body rod protein [Yersinia pestis D182038] gi|270335151|gb|EFA45928.1| flagellar basal-body rod protein FlgC [Yersinia pestis KIM D27] gi|294354491|gb|ADE64832.1| flagellar basal body rod protein [Yersinia pestis Z176003] gi|320015469|gb|ADV99040.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 134 Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 20/43 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N + EM I ++ + + +++ + ML+ + Sbjct: 89 GYVRMPNVDVTGEMVNTISASRSYQANVEVLNTTKSLMLKTLT 131 Score = 39.5 bits (90), Expect = 0.41, Method: Composition-based stats. Identities = 13/80 (16%), Positives = 26/80 (32%), Gaps = 6/80 (7%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSEVVGAIKNDIDQK 55 F+I +A A QR++ A N++N G +R +V F + + Sbjct: 4 LNIFDIAGSALSAQSQRMNVSASNLANADSVTGPDGQPYRAKQVVFQVAAQPGQETGGVR 63 Query: 56 ISFVASGKEYLSKEVGSFIS 75 ++ + Sbjct: 64 VAQIVDDPSPDRLVYQPGNP 83 >gi|322832562|ref|YP_004212589.1| flagellar basal-body rod protein FlgC [Rahnella sp. Y9602] gi|321167763|gb|ADW73462.1| flagellar basal-body rod protein FlgC [Rahnella sp. Y9602] Length = 134 Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 6/43 (13%), Positives = 22/43 (51%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G+++ N + + EM I ++ + + +++ + M++ + Sbjct: 89 GYVQMPNVDVVSEMVNTISASRSYQANVEVLNTTKSLMMKTLT 131 Score = 39.9 bits (91), Expect = 0.33, Method: Composition-based stats. Identities = 16/102 (15%), Positives = 29/102 (28%), Gaps = 7/102 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS-EVVGAIKNDID 53 M F+I +A A QRL+ A NM+N G ++ +V F + + Sbjct: 3 MLGIFDIAGSALAAQSQRLNVSASNMANADSVTGPDGKPYKAKQVVFQVDAAPGQETGGV 62 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESP 95 + V + + + Sbjct: 63 KVAQVVDDPAPMRMVYEPGNPMADAKGYVQMPNVDVVSEMVN 104 >gi|297617135|ref|YP_003702294.1| flagellar basal-body rod protein FlgB [Syntrophothermus lipocalidus DSM 12680] gi|297144972|gb|ADI01729.1| flagellar basal-body rod protein FlgB [Syntrophothermus lipocalidus DSM 12680] Length = 138 Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 29/70 (41%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A R +A+N++N DT G++ ++V F E + + + + + +L Sbjct: 17 ALDGAMLRQKVIANNLANVDTPGYKAMEVTFEEQLKNSMKEAGSEYNLKTTHPRHLQIPN 76 Query: 71 GSFISTGTEL 80 S G + Sbjct: 77 ISSFQVGINV 86 >gi|260893878|ref|YP_003239975.1| flagellar basal-body rod protein FlgB [Ammonifex degensii KC4] gi|260866019|gb|ACX53125.1| flagellar basal-body rod protein FlgB [Ammonifex degensii KC4] Length = 133 Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 27/79 (34%), Gaps = 2/79 (2%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ--KISFVASGKEYLSKE 69 A R +ADN++N DT GF+ V+F E + N ++ Sbjct: 16 LDAAALRQRVIADNLANVDTPGFKKGVVRFEEELKRALNAPLPLRTTDPRHFPSPVPLEK 75 Query: 70 VGSFISTGTELDFALEGDA 88 V + +G+ Sbjct: 76 VSPRVERDYFTSMRADGNN 94 >gi|320173527|gb|EFW48723.1| Flagellar basal-body rod protein FlgC [Shigella dysenteriae CDC 74-1112] Length = 134 Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 6/43 (13%), Positives = 22/43 (51%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G+++ N + + EM + ++ + + +++ + ML+ + Sbjct: 89 GYVKMPNVDVVGEMVNTMSASRSYQANVEVLNTVKSMMLKTLT 131 Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 6/47 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42 F+I +A A QRL+ A N++N G +R +V F Sbjct: 4 LNIFDIAGSALTAQFQRLNVAASNLANADSVTGPDGQPYRAKQVVFQ 50 >gi|238755326|ref|ZP_04616669.1| Flagellar basal-body rod protein flgC [Yersinia ruckeri ATCC 29473] gi|238706462|gb|EEP98836.1| Flagellar basal-body rod protein flgC [Yersinia ruckeri ATCC 29473] gi|253317693|gb|ACT22782.1| flagellar basal body rod protein FlgC [Yersinia ruckeri] Length = 134 Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N + + EM I ++ + + +++ + ML+ + Sbjct: 89 GYVRMPNVDVVGEMVNTISASRSYQANVEVLNTTKSMMLKTLT 131 Score = 36.4 bits (82), Expect = 3.4, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 6/47 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42 F+I +A A QR++ A NM+N G +R +V F Sbjct: 4 LNIFDIAGSALSAQSQRMNVSASNMANADSVTGPDGQPYRAKQVVFQ 50 >gi|90021857|ref|YP_527684.1| flagellar basal body rod protein FlgC [Saccharophagus degradans 2-40] gi|89951457|gb|ABD81472.1| flagellar basal-body rod protein FlgC [Saccharophagus degradans 2-40] Length = 144 Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 18/139 (12%), Positives = 37/139 (26%), Gaps = 6/139 (4%) Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 T +AS +S + + + Q Sbjct: 9 TAGSGMNAQSVRLNTTASNIANAETASSSADTVYRGRHPVFATVQAGYMQGQVGALDDEQ 68 Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 G V + P P D G++ N N + EM MI ++ F Sbjct: 69 EMGVQVMGIVESDAPLQRRYEPGHPQADEE------GYVHYPNVNIVEEMANMISASRSF 122 Query: 221 NSITTLIDENEKSMLEAIR 239 +++ ++ + ++ Sbjct: 123 QMNVEVMNSAKQMVQRVLQ 141 Score = 36.8 bits (83), Expect = 2.5, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 20/53 (37%), Gaps = 6/53 (11%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDT------VGFRTIKVKFSEVVGAIKND 51 F+ + A RL+T A N++N +T +R F+ V Sbjct: 7 FDTAGSGMNAQSVRLNTTASNIANAETASSSADTVYRGRHPVFATVQAGYMQG 59 >gi|193069522|ref|ZP_03050476.1| flagellar basal-body rod protein FlgC [Escherichia coli E110019] gi|192957270|gb|EDV87719.1| flagellar basal-body rod protein FlgC [Escherichia coli E110019] Length = 134 Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 6/43 (13%), Positives = 22/43 (51%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G+++ N + + EM + ++ + + +++ + ML+ + Sbjct: 89 GYVKMPNVDVVGEMVNTMSASRSYQANVEVLNTVKSMMLKTLT 131 Score = 36.0 bits (81), Expect = 4.7, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 20/47 (42%), Gaps = 6/47 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42 F+I +A A QRL+ N++N G +R +V F Sbjct: 4 LNIFDIAGSALTAQSQRLNVAVSNLANADSVTGPDGQPYRAKQVVFQ 50 >gi|260767771|ref|ZP_05876706.1| flagellar basal-body rod protein FlgC [Vibrio furnissii CIP 102972] gi|260617280|gb|EEX42464.1| flagellar basal-body rod protein FlgC [Vibrio furnissii CIP 102972] gi|315179397|gb|ADT86311.1| flagellar basal-body rod protein FlgC [Vibrio furnissii NCTC 11218] Length = 138 Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 23/43 (53%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N M EM MI ++ + + + D +++ +L ++ Sbjct: 93 GYIYKPNVNVMEEMANMISASRSYQTNVQVADASKQMLLRTLQ 135 Score = 35.2 bits (79), Expect = 7.2, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 26/62 (41%), Gaps = 6/62 (9%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56 FN+ +A A RL+T + N++N D+V ++ F + + + D + Sbjct: 5 NVFNVTGSAMSAESVRLNTTSSNLANADSVSSSAKDTYKARHAVFGAELSKARYNRDPNV 64 Query: 57 SF 58 Sbjct: 65 PV 66 >gi|298529920|ref|ZP_07017322.1| flagellar hook-associated protein FlgK [Desulfonatronospira thiodismutans ASO3-1] gi|298509294|gb|EFI33198.1| flagellar hook-associated protein FlgK [Desulfonatronospira thiodismutans ASO3-1] Length = 701 Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 8/39 (20%), Positives = 15/39 (38%) Query: 200 EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 E S N EM +I + + +I ++ M + Sbjct: 659 EKSGVNLDEEMSNLIKYQHSYQAAARMISTADQMMQTLL 697 Score = 52.2 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 24/77 (31%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 N G A A + + T +N++N +T G+R +V+ E + A Sbjct: 8 MNSGRTALFANQSAIQTTGNNIANVNTEGYRRREVRLEEAMALDTAPGQIGTGVNAKEVF 67 Query: 65 YLSKEVGSFISTGTELD 81 D Sbjct: 68 RHFDSFIETQYNDKSSD 84 >gi|269796409|ref|YP_003315864.1| flagellar hook-associated protein FlgK [Sanguibacter keddieii DSM 10542] gi|269098594|gb|ACZ23030.1| flagellar hook-associated protein FlgK [Sanguibacter keddieii DSM 10542] Length = 475 Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 10/58 (17%), Positives = 23/58 (39%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 + + L++ + Q L N++N +T G+ +V V + + + V Sbjct: 5 SGLSTALSSLITQRQALEVAGQNLANINTPGYTRQRVDMQSVSAGQGATMFSQGNQVG 62 Score = 44.5 bits (103), Expect = 0.013, Method: Composition-based stats. Identities = 3/39 (7%), Positives = 13/39 (33%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 + E M+ + + ++ ++ + + I Sbjct: 433 VDQDEESINMLSFQRAYQGAARVMTAVDEMLDQLINRTG 471 >gi|84388089|ref|ZP_00990985.1| flagellar basal body rod protein [Vibrio splendidus 12B01] gi|84377156|gb|EAP94026.1| flagellar basal body rod protein [Vibrio splendidus 12B01] Length = 137 Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 23/43 (53%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N M EM MI ++ + + + D +++ +L ++ Sbjct: 92 GYIYKPNVNVMEEMANMISASRAYQTNVQVADSSKQMLLRTLQ 134 Score = 36.4 bits (82), Expect = 3.2, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 27/81 (33%), Gaps = 6/81 (7%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56 FN+ +A A RL+T + N++N D+V ++ F + +N Sbjct: 5 NVFNVTGSAMSAESVRLNTTSSNLANADSVSSSAEETYKARHAVFGAELNKARNSGHTVP 64 Query: 57 SFVASGKEYLSKEVGSFISTG 77 V E + Sbjct: 65 VKVLGIVESDKPLSAEYNPDH 85 >gi|301168116|emb|CBW27702.1| flagellar basal-body rod protein [Bacteriovorax marinus SJ] Length = 135 Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 8/64 (12%), Positives = 26/64 (40%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + ++ + R ++ N++N +T G++ +V F + + + Q+ Sbjct: 5 DKTLKALASSLNFRQMRQEIISSNIANAETPGYKAKRVDFEQALARALDVDGQQQLNTED 64 Query: 62 GKEY 65 + + Sbjct: 65 SRHF 68 >gi|293409440|ref|ZP_06653016.1| flagellar basal-body rod protein FlgC [Escherichia coli B354] gi|291469908|gb|EFF12392.1| flagellar basal-body rod protein FlgC [Escherichia coli B354] Length = 134 Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 6/43 (13%), Positives = 22/43 (51%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G+++ N + + EM + ++ + + +++ + ML+ + Sbjct: 89 GYVKMPNVDVVGEMVNTMSASRSYQANVEVLNTVKSMMLKTLT 131 Score = 39.1 bits (89), Expect = 0.54, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 6/47 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42 F+I +A A QRL+ A N++N G +R +V F Sbjct: 4 LNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRAKQVVFQ 50 >gi|170682563|ref|YP_001744106.1| flagellar basal body rod protein FlgC [Escherichia coli SMS-3-5] gi|170520281|gb|ACB18459.1| flagellar basal-body rod protein FlgC [Escherichia coli SMS-3-5] Length = 134 Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 6/43 (13%), Positives = 22/43 (51%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G+++ N + + EM + ++ + + +++ + ML+ + Sbjct: 89 GYVKMPNVDVVGEMVNTMSASRSYQANVEVLNTVKSMMLKTLT 131 Score = 38.7 bits (88), Expect = 0.79, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 6/47 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDT-VG-----FRTIKVKFS 42 F+I +A A QRL+ A N++N D+ G +R +V F Sbjct: 4 LNIFDIAGSALTAQSQRLNVAASNLANADSLTGPDGQPYRAKQVVFQ 50 >gi|54294169|ref|YP_126584.1| flagellar hook-associated protein FlgK [Legionella pneumophila str. Lens] gi|53754001|emb|CAH15472.1| flagellar hook-associated protein 1 [Legionella pneumophila str. Lens] Length = 649 Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 18/132 (13%), Positives = 49/132 (37%), Gaps = 1/132 (0%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + NI + A ++ L +N++N T G+ ++F+ + + + + V+ Sbjct: 1 MSILNIAYSGLNAFQRALDVTGNNIANFKTRGYSRQSIQFTPI-ASNRYAGSYIGAGVSV 59 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 Y + + + + L + + DA++ +L++DG + + G+ Sbjct: 60 SSIYRNVDQFANAQVRSTLSYRTQYDAFYNQAIQIDKLLSQDGSSISAPLQTFFDSIGQL 119 Query: 122 PVLDMASVPIQI 133 + Sbjct: 120 NSTPDNIATRGV 131 >gi|163750572|ref|ZP_02157810.1| flagellar basal-body rod protein FlgC [Shewanella benthica KT99] gi|161329727|gb|EDQ00716.1| flagellar basal-body rod protein FlgC [Shewanella benthica KT99] Length = 139 Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 20/43 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 GF+ N N M EM MI ++ + + + + + + +R Sbjct: 93 GFIYKPNVNVMEEMANMISASRSYQMNVQVAEAAKSMLQQTLR 135 Score = 39.1 bits (89), Expect = 0.61, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 31/86 (36%), Gaps = 7/86 (8%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKF-SEVVGAIKNDIDQK 55 FN+ + A RL+T A N++N D+V +R F +E++ A Sbjct: 5 NIFNVAGSGMSAQSIRLNTTASNIANADSVSSSVDKTYRARHPIFAAEMLKASYQQQSSP 64 Query: 56 ISFVASGKEYLSKEVGSFISTGTELD 81 V E + + + D Sbjct: 65 SVVVKGIVESDAPLLKEYSPNHPMAD 90 >gi|91776307|ref|YP_546063.1| flagellar basal-body rod protein FlgC [Methylobacillus flagellatus KT] gi|91710294|gb|ABE50222.1| flagellar basal-body rod protein FlgC [Methylobacillus flagellatus KT] Length = 135 Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 20/43 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N EM MI ++ + + ++ + +L+ + Sbjct: 90 GYVAMPNVNVTEEMVNMISASRSYQNNVETMNAAKSMLLKTLT 132 Score = 36.4 bits (82), Expect = 4.0, Method: Composition-based stats. Identities = 23/92 (25%), Positives = 32/92 (34%), Gaps = 8/92 (8%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNT----DTVG--FRTIKVKFSEVVGAIKNDID--Q 54 FNI +A A QRL+ VA N++N + G +RT + FS V K D + Sbjct: 5 NVFNISGSAMSAQGQRLNVVASNLANADSVTSSNGQPYRTKHIVFSAVPVNAKGDAQGVK 64 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEG 86 V K A+ Sbjct: 65 VQQIVEDQAPPQLKYDPKHPLADANGYVAMPN 96 >gi|150390489|ref|YP_001320538.1| flagellar basal-body rod protein FlgC [Alkaliphilus metalliredigens QYMF] gi|149950351|gb|ABR48879.1| flagellar basal-body rod protein FlgC [Alkaliphilus metalliredigens QYMF] Length = 147 Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 23/42 (54%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N + + EM MI T+ + + TT ++ + ++A+ Sbjct: 102 GYVLMPNVDIVVEMANMISATRAYEANTTALNATKSMAMKAL 143 Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 18/127 (14%), Positives = 38/127 (29%), Gaps = 19/127 (14%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE------------- 43 + N + A R+ T++ N++N +T G ++ V F Sbjct: 5 NAINTSASGLTAERFRMDTISKNIANANTTRTPNGSPYKRQVVLFQSKEDAKGFSSQLER 64 Query: 44 VVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103 ++ + ++ V + + E + L + +E I TR Sbjct: 65 IMNNNEKPGGVEVVGVKNDSSPYRQVYDPGHPDANEEGYVLMPNVDIVVEMANMISATRA 124 Query: 104 GRFKVTD 110 T Sbjct: 125 YEANTTA 131 >gi|88799029|ref|ZP_01114610.1| Flagellar hook-associated protein [Reinekea sp. MED297] gi|88778256|gb|EAR09450.1| Flagellar hook-associated protein [Reinekea sp. MED297] Length = 1025 Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 17/42 (40%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 + + + A + L T N+SN +T G+ + + Sbjct: 1 MSLLSTAITGIKAHQTALETTGHNISNANTPGYSRQEAVMAT 42 Score = 37.5 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 24/220 (10%), Positives = 60/220 (27%), Gaps = 23/220 (10%) Query: 36 TIKVKFSEVVGAIKNDIDQK----------ISFVASGKEYLSKEVGSFISTGTELDFALE 85 +K F E + A + + V E + S ++ G ++D + Sbjct: 809 AVKAAFEEQIQAQLDSPGRAEVDIDEQGNVSYKVFMRVEGTGTQAVSRVNVGGQVDVVMA 868 Query: 86 GDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEK 145 + G I + + G G+ D ++ + N + Sbjct: 869 DGIRLETDPEVGGIFNGVPDARSSYMGFQFQVGGRPEAGDEFTIEWNDAGVSDNRNALDL 928 Query: 146 GEISQKGKVIATMGLYSVDMS-----QGFVRRENSGISPNIPPTPLEDLSGVTV--KRGF 198 + + G + S + + + + + + V +G Sbjct: 929 VGLETTDTINDIDGGMTFTESYSQTVEQIGTLTSQAQIRSDASRAVLEGTQSEVDSVQG- 987 Query: 199 LEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 N E ++I +N+ +I ++ + Sbjct: 988 -----VNLDEEAARLIEFQVAYNANAKVIAVAQELFDSIL 1022 >gi|261339374|ref|ZP_05967232.1| flagellar basal-body rod protein FlgC [Enterobacter cancerogenus ATCC 35316] gi|288318175|gb|EFC57113.1| flagellar basal-body rod protein FlgC [Enterobacter cancerogenus ATCC 35316] Length = 134 Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 6/43 (13%), Positives = 22/43 (51%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G+++ N + + EM + ++ + + +++ + ML+ + Sbjct: 89 GYVKMPNVDVVGEMVNSMSASRSYQANVEVLNTVKSMMLKTLT 131 Score = 39.5 bits (90), Expect = 0.42, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 28/105 (26%), Gaps = 7/105 (6%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFS-EVVGAIKNDIDQ 54 F+I +A A +RL+ A N++N D+V +R +V F + + Sbjct: 4 LNIFDIAGSALTAQSKRLNVAASNLANADSVAGPDGQPYRAKQVVFQVDAAPGAATGGVK 63 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 V S + Sbjct: 64 VSDVVESQAPDKLVYEPGNPLADANGYVKMPNVDVVGEMVNSMSA 108 >gi|161503737|ref|YP_001570849.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160865084|gb|ABX21707.1| hypothetical protein SARI_01822 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 134 Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 6/43 (13%), Positives = 22/43 (51%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G+++ N + + EM + ++ + + +++ + ML+ + Sbjct: 89 GYVKMPNVDVVGEMVNTMSASRSYQANVEVLNTVKSMMLKTLT 131 Score = 38.7 bits (88), Expect = 0.71, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 6/47 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42 F+I +A A +RL+ A N++N G +R +V F Sbjct: 4 LNIFDIAGSALTAQSKRLNVAASNLANADSVTGPDGQPYRAKQVVFQ 50 >gi|78043872|ref|YP_359837.1| flagellar basal-body rod protein FlgB [Carboxydothermus hydrogenoformans Z-2901] gi|77995987|gb|ABB14886.1| flagellar basal-body rod protein FlgB [Carboxydothermus hydrogenoformans Z-2901] Length = 136 Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 21/55 (38%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65 A R +A N++N +T G+R V F E V N S + + Sbjct: 15 GIDAATIRQQAIAHNIANVNTPGYRKEVVVFEEKVQEFLNQKKGNFSLKTTHPRH 69 >gi|254485520|ref|ZP_05098725.1| flagellar basal-body rod protein FlgC [Roseobacter sp. GAI101] gi|214042389|gb|EEB83027.1| flagellar basal-body rod protein FlgC [Roseobacter sp. GAI101] Length = 130 Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 21/44 (47%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46 + ++ + A RL +++N+SN DT G+R V F Sbjct: 6 NALDVSSSGLRAQANRLRHLSENISNADTPGYRRKLVSFQTAFS 49 Score = 39.5 bits (90), Expect = 0.44, Method: Composition-based stats. Identities = 5/33 (15%), Positives = 13/33 (39%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 SN N + E+ + + + + ++ K Sbjct: 88 GSNVNLLIELADAKEAQRSYEANLKMFEQTRKM 120 >gi|82777311|ref|YP_403660.1| flagellar basal body rod protein FlgC [Shigella dysenteriae Sd197] gi|309788141|ref|ZP_07682747.1| flagellar basal-body rod protein FlgC [Shigella dysenteriae 1617] gi|81241459|gb|ABB62169.1| cell-proximal portion of basal-body rod [Shigella dysenteriae Sd197] gi|308923993|gb|EFP69494.1| flagellar basal-body rod protein FlgC [Shigella dysenteriae 1617] Length = 134 Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 6/43 (13%), Positives = 22/43 (51%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G+++ N + + EM + ++ + + +++ + ML+ + Sbjct: 89 GYVKMPNVDVVGEMVNTMSASRSYQANVEVLNTVKSMMLKTLT 131 Score = 39.1 bits (89), Expect = 0.55, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 6/47 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42 F+I +A A QRL+ A N++N G +R +V F Sbjct: 4 LNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRAKQVVFQ 50 >gi|312882661|ref|ZP_07742398.1| flagellar basal body rod protein FlgC [Vibrio caribbenthicus ATCC BAA-2122] gi|309369622|gb|EFP97137.1| flagellar basal body rod protein FlgC [Vibrio caribbenthicus ATCC BAA-2122] Length = 138 Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 23/43 (53%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N M EM MI ++ + + + D +++ +L ++ Sbjct: 93 GYIYKPNVNVMEEMANMISASRSYQTNVQVADASKQMLLRTLQ 135 >gi|296102910|ref|YP_003613056.1| flagellar basal body rod protein FlgC [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057369|gb|ADF62107.1| flagellar basal body rod protein FlgC [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 134 Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 6/43 (13%), Positives = 22/43 (51%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G+++ N + + EM + ++ + + +++ + ML+ + Sbjct: 89 GYVKMPNVDVVGEMVNSMSASRSYQANVEVLNTVKSMMLKTLT 131 Score = 39.1 bits (89), Expect = 0.55, Method: Composition-based stats. Identities = 15/105 (14%), Positives = 26/105 (24%), Gaps = 7/105 (6%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS-EVVGAIKNDIDQ 54 F+I +A A +RL+ A N++N G +R +V F + + Sbjct: 4 LNIFDIAGSALTAQSKRLNVAASNLANADSVTGPDGQPYRAKQVVFQVDAAPGAATGGVK 63 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 V S + Sbjct: 64 VSDVVESQAPDKLVYEPGNPLADANGYVKMPNVDVVGEMVNSMSA 108 >gi|256833255|ref|YP_003161982.1| flagellar hook-associated protein FlgK [Jonesia denitrificans DSM 20603] gi|256686786|gb|ACV09679.1| flagellar hook-associated protein FlgK [Jonesia denitrificans DSM 20603] Length = 463 Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 6/40 (15%), Positives = 17/40 (42%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS 42 + + L++ A + N++N +T G+ + + Sbjct: 5 SGLSTALSSLNAQRAAMEITGQNIANVNTPGYTRQRADMT 44 Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 2/39 (5%), Positives = 15/39 (38%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 ++ E ++ + + + ++ ++ + + I Sbjct: 421 VDTDEETVNLLSYQRAYQAAARVMTTVDEMLDQLINRTG 459 >gi|218288291|ref|ZP_03492590.1| flagellar basal-body rod protein FlgB [Alicyclobacillus acidocaldarius LAA1] gi|218241650|gb|EED08823.1| flagellar basal-body rod protein FlgB [Alicyclobacillus acidocaldarius LAA1] Length = 134 Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 21/49 (42%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 +A A R + A+N++N T G++ V F ++ + D Sbjct: 9 SALDASTLRQAVYANNIANAGTPGYKRQDVAFETLLQSALGSGDSNALG 57 >gi|27363707|ref|NP_759235.1| flagellar basal body rod protein FlgC [Vibrio vulnificus CMCP6] gi|37679145|ref|NP_933754.1| flagellar basal body rod protein FlgC [Vibrio vulnificus YJ016] gi|320157111|ref|YP_004189490.1| flagellar basal-body rod protein FlgC [Vibrio vulnificus MO6-24/O] gi|27359823|gb|AAO08762.1| flagellar basal-body rod protein FlgC [Vibrio vulnificus CMCP6] gi|37197887|dbj|BAC93725.1| flagellar basal body rod protein FlgC [Vibrio vulnificus YJ016] gi|319932423|gb|ADV87287.1| flagellar basal-body rod protein FlgC [Vibrio vulnificus MO6-24/O] Length = 138 Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 23/43 (53%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N M EM MI ++ + + + D +++ +L ++ Sbjct: 93 GYIYKPNVNVMEEMANMISASRAYQTNVQVADASKQMLLRTLQ 135 >gi|307310148|ref|ZP_07589798.1| flagellar basal-body rod protein FlgC [Escherichia coli W] gi|306909866|gb|EFN40360.1| flagellar basal-body rod protein FlgC [Escherichia coli W] gi|315060352|gb|ADT74679.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli W] gi|320200970|gb|EFW75554.1| Flagellar basal-body rod protein FlgC [Escherichia coli EC4100B] gi|323379087|gb|ADX51355.1| flagellar basal-body rod protein FlgC [Escherichia coli KO11] Length = 134 Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 6/43 (13%), Positives = 22/43 (51%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G+++ N + + EM + ++ + + +++ + ML+ + Sbjct: 89 GYVKMPNVDVVGEMVNTMSASRSYQANVEVLNTVKSMMLKTLT 131 Score = 39.1 bits (89), Expect = 0.55, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 6/47 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42 F+I +A A QRL+ A N++N G +R +V F Sbjct: 4 LNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRAKQVVFQ 50 >gi|169831934|ref|YP_001717916.1| flagellar hook-associated protein FlgK [Candidatus Desulforudis audaxviator MP104C] gi|169638778|gb|ACA60284.1| flagellar hook-associated protein FlgK [Candidatus Desulforudis audaxviator MP104C] Length = 532 Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 8/55 (14%), Positives = 19/55 (34%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 I + +Q ++T A N++N +T G++ + + Sbjct: 5 GIEIARRSLHGHQQAMNTTAHNIANINTPGYKRQEAVLQSTPAIAYPSVFSPRPG 59 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 12/80 (15%), Positives = 30/80 (37%), Gaps = 6/80 (7%) Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLED-----SNANSMYEMGQMIHLTQKFN 221 G+ ++ +GI ++ + + G +E S N E+ +MI + Sbjct: 453 DGYYQQLVTGIGADLNAAQRGRDNVSAIL-GQIEALRESVSGVNLDEELTRMIQYQYGYQ 511 Query: 222 SITTLIDENEKSMLEAIRNI 241 + +I ++ + I + Sbjct: 512 AAARVITVLDELLDTLINRM 531 >gi|170722894|ref|YP_001750582.1| flagellar basal body rod protein FlgC [Pseudomonas putida W619] gi|169760897|gb|ACA74213.1| flagellar basal-body rod protein FlgC [Pseudomonas putida W619] Length = 147 Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 32/73 (43%), Gaps = 6/73 (8%) Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 +G + +++ + P P + K G++ N N + EM MI ++ F + L Sbjct: 78 KGIIEDQSNLEARYEPNHPAAN------KDGYVYYPNVNVVEEMADMISASRAFQTNAEL 131 Query: 227 IDENEKSMLEAIR 239 ++ + M + + Sbjct: 132 MNTAKNMMQKVLT 144 Score = 41.4 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 6/56 (10%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQ 54 FNI + A RL+TVA N++N +TV +R F+ + Q Sbjct: 7 FNIAGSGMSAQNTRLNTVASNIANAETVSSSIDQTYRARHPVFATTFQNAQAGGSQ 62 >gi|253996321|ref|YP_003048385.1| flagellar basal-body rod protein FlgC [Methylotenera mobilis JLW8] gi|253983000|gb|ACT47858.1| flagellar basal-body rod protein FlgC [Methylotenera mobilis JLW8] Length = 135 Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 20/43 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N EM MI ++ + + ++ + +++ + Sbjct: 89 GYVSMPNVNVTEEMVNMISASRAYQNNVETMNATKTMLMKTLT 131 Score = 41.4 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 40/107 (37%), Gaps = 8/107 (7%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTD-------TVGFRTIKVKFSEVVGAIKNDIDQK 55 FNI +A A QRL+TVA N++N D T +++ +V FS + + K Sbjct: 5 NVFNISGSAMSAQAQRLNTVASNLANADSATSANGTP-YKSKQVVFSAMPSKSPDVSGVK 63 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTR 102 ++ V K + + + E I +R Sbjct: 64 VTKVVEDKSAPRMIYDPKHPLANDKGYVSMPNVNVTEEMVNMISASR 110 >gi|117621411|ref|YP_857345.1| flagellar basal body rod protein FlgC [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117562818|gb|ABK39766.1| flagellar basal-body rod protein FlgC [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 139 Score = 52.6 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 22/43 (51%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 GF+ N N + EM MI+ ++ + + + D +K + + + Sbjct: 93 GFIFKPNVNMVEEMADMINASRSYQTNVQVADSAKKMLQQTLN 135 Score = 36.0 bits (81), Expect = 4.6, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 6/55 (10%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKND 51 F+I +A A RL+TVA NM+N D+V + + F+ + +D Sbjct: 5 KVFDIAGSAMSAQSVRLNTVASNMANADSVSSSVEKTYHARRPIFAAQLDQAMSD 59 >gi|307609983|emb|CBW99512.1| flagellar hook-associated protein 1 [Legionella pneumophila 130b] Length = 649 Score = 52.6 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 18/132 (13%), Positives = 49/132 (37%), Gaps = 1/132 (0%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + NI + A ++ L +N++N T G+ ++F+ + + + + V+ Sbjct: 1 MSILNIAYSGLNAFQRALDVTGNNIANFKTRGYSRQSIQFTPI-ASNRYAGSYIGAGVSV 59 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 Y + + + + L + + DA++ +L++DG + + G+ Sbjct: 60 SSIYRNVDQFANAQVRSTLSYRTQYDAFYNQAIQIDKLLSQDGSSISVPLQTFFDSIGQL 119 Query: 122 PVLDMASVPIQI 133 + Sbjct: 120 NSTPDNIATRGV 131 >gi|26991079|ref|NP_746504.1| flagellar basal body rod protein FlgC [Pseudomonas putida KT2440] gi|24986114|gb|AAN69968.1|AE016635_4 flagellar basal-body rod protein FlgC [Pseudomonas putida KT2440] gi|313497759|gb|ADR59125.1| FlgC [Pseudomonas putida BIRD-1] Length = 147 Score = 52.6 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N + EM MI ++ F + L++ + M + + Sbjct: 102 GYVYYPNVNVVEEMADMISASRAFQTNAELMNTAKNMMQKVLT 144 Score = 41.4 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 6/56 (10%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQ 54 FNI + A RL+TVA N++N +TV +R F+ + Q Sbjct: 7 FNIAGSGMSAQNTRLNTVASNIANAETVSSSIDQTYRARHPVFATTFQNAQAGSSQ 62 >gi|15801191|ref|NP_287208.1| flagellar basal body rod protein FlgC [Escherichia coli O157:H7 EDL933] gi|15830706|ref|NP_309479.1| flagellar basal body rod protein FlgC [Escherichia coli O157:H7 str. Sakai] gi|16129037|ref|NP_415592.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli str. K-12 substr. MG1655] gi|26247214|ref|NP_753254.1| flagellar basal body rod protein FlgC [Escherichia coli CFT073] gi|74311636|ref|YP_310055.1| flagellar basal body rod protein FlgC [Shigella sonnei Ss046] gi|82544460|ref|YP_408407.1| flagellar basal body rod protein FlgC [Shigella boydii Sb227] gi|89107920|ref|AP_001700.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli str. K-12 substr. W3110] gi|91210226|ref|YP_540212.1| flagellar basal body rod protein FlgC [Escherichia coli UTI89] gi|110641250|ref|YP_668980.1| flagellar basal body rod protein FlgC [Escherichia coli 536] gi|117623260|ref|YP_852173.1| flagellar basal body rod protein FlgC [Escherichia coli APEC O1] gi|157158527|ref|YP_001462308.1| flagellar basal body rod protein FlgC [Escherichia coli E24377A] gi|157160601|ref|YP_001457919.1| flagellar basal body rod protein FlgC [Escherichia coli HS] gi|168747150|ref|ZP_02772172.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7 str. EC4113] gi|168758634|ref|ZP_02783641.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7 str. EC4401] gi|168764486|ref|ZP_02789493.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7 str. EC4501] gi|168767733|ref|ZP_02792740.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7 str. EC4486] gi|168773919|ref|ZP_02798926.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7 str. EC4196] gi|168783604|ref|ZP_02808611.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7 str. EC4076] gi|168790009|ref|ZP_02815016.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7 str. EC869] gi|168802019|ref|ZP_02827026.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7 str. EC508] gi|170020530|ref|YP_001725484.1| flagellar basal body rod protein FlgC [Escherichia coli ATCC 8739] gi|170080725|ref|YP_001730045.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli str. K-12 substr. DH10B] gi|187733039|ref|YP_001880754.1| flagellar basal body rod protein FlgC [Shigella boydii CDC 3083-94] gi|188493209|ref|ZP_03000479.1| flagellar basal-body rod protein FlgC [Escherichia coli 53638] gi|191168455|ref|ZP_03030243.1| flagellar basal-body rod protein FlgC [Escherichia coli B7A] gi|191172415|ref|ZP_03033956.1| flagellar basal-body rod protein FlgC [Escherichia coli F11] gi|193064524|ref|ZP_03045604.1| flagellar basal-body rod protein FlgC [Escherichia coli E22] gi|194428485|ref|ZP_03061025.1| flagellar basal-body rod protein FlgC [Escherichia coli B171] gi|194437997|ref|ZP_03070090.1| flagellar basal-body rod protein FlgC [Escherichia coli 101-1] gi|195935464|ref|ZP_03080846.1| flagellar basal body rod protein FlgC [Escherichia coli O157:H7 str. EC4024] gi|208806183|ref|ZP_03248520.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7 str. EC4206] gi|208816163|ref|ZP_03257342.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7 str. EC4045] gi|208822529|ref|ZP_03262848.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7 str. EC4042] gi|209400948|ref|YP_002269920.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7 str. EC4115] gi|209918328|ref|YP_002292412.1| flagellar basal body rod protein FlgC [Escherichia coli SE11] gi|215486283|ref|YP_002328714.1| flagellar basal body rod protein FlgC [Escherichia coli O127:H6 str. E2348/69] gi|217328457|ref|ZP_03444539.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7 str. TW14588] gi|218553653|ref|YP_002386566.1| flagellar basal body rod protein FlgC [Escherichia coli IAI1] gi|218557956|ref|YP_002390869.1| flagellar basal body rod protein FlgC [Escherichia coli S88] gi|218689027|ref|YP_002397239.1| flagellar basal body rod protein FlgC [Escherichia coli ED1a] gi|218694608|ref|YP_002402275.1| flagellar basal body rod protein FlgC [Escherichia coli 55989] gi|218700423|ref|YP_002408052.1| flagellar basal body rod protein FlgC [Escherichia coli IAI39] gi|218704482|ref|YP_002412001.1| flagellar basal body rod protein FlgC [Escherichia coli UMN026] gi|227886568|ref|ZP_04004373.1| flagellar basal body rod protein FlgC [Escherichia coli 83972] gi|237706940|ref|ZP_04537421.1| flagellar rod protein FlgC [Escherichia sp. 3_2_53FAA] gi|238900328|ref|YP_002926124.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli BW2952] gi|253773902|ref|YP_003036733.1| flagellar basal body rod protein FlgC [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254161180|ref|YP_003044288.1| flagellar basal body rod protein FlgC [Escherichia coli B str. REL606] gi|254792456|ref|YP_003077293.1| flagellar basal body rod protein FlgC [Escherichia coli O157:H7 str. TW14359] gi|256018669|ref|ZP_05432534.1| flagellar basal body rod protein FlgC [Shigella sp. D9] gi|256023228|ref|ZP_05437093.1| flagellar basal body rod protein FlgC [Escherichia sp. 4_1_40B] gi|260843314|ref|YP_003221092.1| flagellar component FlgC of cell-proximal portion of basal-body rod [Escherichia coli O103:H2 str. 12009] gi|260854557|ref|YP_003228448.1| flagellar component FlgC of cell-proximal portion of basal-body rod [Escherichia coli O26:H11 str. 11368] gi|260867437|ref|YP_003233839.1| flagellar component FlgC of cell-proximal portion of basal-body rod [Escherichia coli O111:H- str. 11128] gi|261227021|ref|ZP_05941302.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli O157:H7 str. FRIK2000] gi|261256255|ref|ZP_05948788.1| flagellar component FlgC of cell-proximal portion of basal-body rod [Escherichia coli O157:H7 str. FRIK966] gi|291282094|ref|YP_003498912.1| Cell-proximal portion of basal-body rod [Escherichia coli O55:H7 str. CB9615] gi|293404358|ref|ZP_06648352.1| flgC [Escherichia coli FVEC1412] gi|293414369|ref|ZP_06657018.1| flagellar basal-body rod protein FlgC [Escherichia coli B185] gi|293433364|ref|ZP_06661792.1| flagellar basal-body rod protein FlgC [Escherichia coli B088] gi|298380138|ref|ZP_06989743.1| flagellar basal-body rod protein FlgC [Escherichia coli FVEC1302] gi|300816776|ref|ZP_07096996.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 107-1] gi|300821145|ref|ZP_07101294.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 119-7] gi|300899593|ref|ZP_07117832.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 198-1] gi|300902465|ref|ZP_07120447.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 84-1] gi|300918676|ref|ZP_07135257.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 115-1] gi|300922600|ref|ZP_07138700.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 182-1] gi|300928374|ref|ZP_07143908.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 187-1] gi|300938639|ref|ZP_07153368.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 21-1] gi|300950169|ref|ZP_07164114.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 116-1] gi|300954386|ref|ZP_07166840.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 175-1] gi|300974378|ref|ZP_07172590.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 45-1] gi|300982623|ref|ZP_07176207.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 200-1] gi|301023261|ref|ZP_07187058.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 69-1] gi|301029711|ref|ZP_07192765.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 196-1] gi|301051142|ref|ZP_07197972.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 185-1] gi|301304987|ref|ZP_07211089.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 124-1] gi|301328556|ref|ZP_07221617.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 78-1] gi|301644986|ref|ZP_07244952.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 146-1] gi|306814077|ref|ZP_07448250.1| flagellar basal body rod protein FlgC [Escherichia coli NC101] gi|307137709|ref|ZP_07497065.1| flagellar basal body rod protein FlgC [Escherichia coli H736] gi|309798068|ref|ZP_07692443.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 145-7] gi|312968852|ref|ZP_07783059.1| flagellar basal-body rod protein FlgC [Escherichia coli 2362-75] gi|312971211|ref|ZP_07785389.1| flagellar basal-body rod protein FlgC [Escherichia coli 1827-70] gi|331641618|ref|ZP_08342753.1| flagellar basal-body rod protein FlgC [Escherichia coli H736] gi|331646332|ref|ZP_08347435.1| flagellar basal-body rod protein FlgC [Escherichia coli M605] gi|331652127|ref|ZP_08353146.1| flagellar basal-body rod protein FlgC [Escherichia coli M718] gi|331657136|ref|ZP_08358098.1| flagellar basal-body rod protein FlgC [Escherichia coli TA206] gi|331662480|ref|ZP_08363403.1| flagellar basal-body rod protein FlgC [Escherichia coli TA143] gi|331667474|ref|ZP_08368338.1| flagellar basal-body rod protein FlgC [Escherichia coli TA271] gi|331672594|ref|ZP_08373383.1| flagellar basal-body rod protein FlgC [Escherichia coli TA280] gi|331676865|ref|ZP_08377561.1| flagellar basal-body rod protein FlgC [Escherichia coli H591] gi|331682576|ref|ZP_08383195.1| flagellar basal-body rod protein FlgC [Escherichia coli H299] gi|332279738|ref|ZP_08392151.1| flagellar rod protein FlgC [Shigella sp. D9] gi|78100011|sp|P0ABX4|FLGC_ECO57 RecName: Full=Flagellar basal-body rod protein flgC; AltName: Full=Putative proximal rod protein gi|78100012|sp|P0ABX3|FLGC_ECOL6 RecName: Full=Flagellar basal-body rod protein flgC; AltName: Full=Putative proximal rod protein gi|78100013|sp|P0ABX2|FLGC_ECOLI RecName: Full=Flagellar basal-body rod protein flgC; AltName: Full=Putative proximal rod protein gi|12514612|gb|AAG55820.1|AE005317_9 flagellar biosynthesis, cell-proximal portion of basal-body rod [Escherichia coli O157:H7 str. EDL933] gi|26107615|gb|AAN79814.1|AE016759_88 Flagellar basal-body rod protein flgC [Escherichia coli CFT073] gi|1787314|gb|AAC74158.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli str. K-12 substr. MG1655] gi|4062651|dbj|BAA35882.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli str. K12 substr. W3110] gi|13360916|dbj|BAB34875.1| flagellar rod protein FlgC [Escherichia coli O157:H7 str. Sakai] gi|73855113|gb|AAZ87820.1| flagellar protein for cell-proximal portion of basal-body rod [Shigella sonnei Ss046] gi|81245871|gb|ABB66579.1| cell-proximal portion of basal-body rod [Shigella boydii Sb227] gi|91071800|gb|ABE06681.1| flagellar biosynthesis, cell-proximal portion of basal-body rod [Escherichia coli UTI89] gi|110342842|gb|ABG69079.1| flagellar basal-body rod protein FlgC [Escherichia coli 536] gi|115512384|gb|ABJ00459.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli APEC O1] gi|157066281|gb|ABV05536.1| flagellar basal-body rod protein FlgC [Escherichia coli HS] gi|157080557|gb|ABV20265.1| flagellar basal-body rod protein FlgC [Escherichia coli E24377A] gi|169755458|gb|ACA78157.1| flagellar basal-body rod protein FlgC [Escherichia coli ATCC 8739] gi|169888560|gb|ACB02267.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli str. K-12 substr. DH10B] gi|187430031|gb|ACD09305.1| flagellar basal-body rod protein FlgC [Shigella boydii CDC 3083-94] gi|187770492|gb|EDU34336.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7 str. EC4196] gi|188017999|gb|EDU56121.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7 str. EC4113] gi|188488408|gb|EDU63511.1| flagellar basal-body rod protein FlgC [Escherichia coli 53638] gi|188999102|gb|EDU68088.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7 str. EC4076] gi|189354569|gb|EDU72988.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7 str. EC4401] gi|189363308|gb|EDU81727.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7 str. EC4486] gi|189365512|gb|EDU83928.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7 str. EC4501] gi|189370511|gb|EDU88927.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7 str. EC869] gi|189375937|gb|EDU94353.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7 str. EC508] gi|190901474|gb|EDV61235.1| flagellar basal-body rod protein FlgC [Escherichia coli B7A] gi|190907299|gb|EDV66897.1| flagellar basal-body rod protein FlgC [Escherichia coli F11] gi|192927776|gb|EDV82390.1| flagellar basal-body rod protein FlgC [Escherichia coli E22] gi|194413537|gb|EDX29819.1| flagellar basal-body rod protein FlgC [Escherichia coli B171] gi|194422933|gb|EDX38927.1| flagellar basal-body rod protein FlgC [Escherichia coli 101-1] gi|208725984|gb|EDZ75585.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7 str. EC4206] gi|208732811|gb|EDZ81499.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7 str. EC4045] gi|208738014|gb|EDZ85697.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7 str. EC4042] gi|209162348|gb|ACI39781.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7 str. EC4115] gi|209773398|gb|ACI85011.1| flagellar rod protein FlgC [Escherichia coli] gi|209773400|gb|ACI85012.1| flagellar rod protein FlgC [Escherichia coli] gi|209773402|gb|ACI85013.1| flagellar rod protein FlgC [Escherichia coli] gi|209773404|gb|ACI85014.1| flagellar rod protein FlgC [Escherichia coli] gi|209773406|gb|ACI85015.1| flagellar rod protein FlgC [Escherichia coli] gi|209911587|dbj|BAG76661.1| flagellar basal-body rod protein FlgC [Escherichia coli SE11] gi|215264355|emb|CAS08712.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli O127:H6 str. E2348/69] gi|217318884|gb|EEC27310.1| flagellar basal-body rod protein FlgC [Escherichia coli O157:H7 str. TW14588] gi|218351340|emb|CAU97046.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli 55989] gi|218360421|emb|CAQ97973.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli IAI1] gi|218364725|emb|CAR02415.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli S88] gi|218370409|emb|CAR18216.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli IAI39] gi|218426591|emb|CAR07419.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli ED1a] gi|218431579|emb|CAR12458.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli UMN026] gi|222032827|emb|CAP75566.1| flagellar basal-body rod protein flgC [Escherichia coli LF82] gi|226898150|gb|EEH84409.1| flagellar rod protein FlgC [Escherichia sp. 3_2_53FAA] gi|227836772|gb|EEJ47238.1| flagellar basal body rod protein FlgC [Escherichia coli 83972] gi|238861102|gb|ACR63100.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli BW2952] gi|242376878|emb|CAQ31595.1| flagellar basal-body rod protein FlgC, subunit of Flagellar Motor Complex and Flagellum [Escherichia coli BL21(DE3)] gi|253324946|gb|ACT29548.1| flagellar basal-body rod protein FlgC [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253973081|gb|ACT38752.1| flagellar basal-body rod protein C [Escherichia coli B str. REL606] gi|253977295|gb|ACT42965.1| flagellar basal-body rod protein C [Escherichia coli BL21(DE3)] gi|254591856|gb|ACT71217.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli O157:H7 str. TW14359] gi|257753206|dbj|BAI24708.1| flagellar component FlgC of cell-proximal portion of basal-body rod [Escherichia coli O26:H11 str. 11368] gi|257758461|dbj|BAI29958.1| flagellar component FlgC of cell-proximal portion of basal-body rod [Escherichia coli O103:H2 str. 12009] gi|257763793|dbj|BAI35288.1| flagellar component FlgC of cell-proximal portion of basal-body rod [Escherichia coli O111:H- str. 11128] gi|260449786|gb|ACX40208.1| flagellar basal-body rod protein FlgC [Escherichia coli DH1] gi|281178183|dbj|BAI54513.1| flagellar basal-body rod protein FlgC [Escherichia coli SE15] gi|284920897|emb|CBG33960.1| flagellar basal-body rod protein FlgC [Escherichia coli 042] gi|290761967|gb|ADD55928.1| Cell-proximal portion of basal-body rod [Escherichia coli O55:H7 str. CB9615] gi|291324183|gb|EFE63605.1| flagellar basal-body rod protein FlgC [Escherichia coli B088] gi|291428944|gb|EFF01969.1| flgC [Escherichia coli FVEC1412] gi|291434427|gb|EFF07400.1| flagellar basal-body rod protein FlgC [Escherichia coli B185] gi|294493232|gb|ADE91988.1| flagellar basal-body rod protein FlgC [Escherichia coli IHE3034] gi|298279836|gb|EFI21344.1| flagellar basal-body rod protein FlgC [Escherichia coli FVEC1302] gi|299877399|gb|EFI85610.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 196-1] gi|300297163|gb|EFJ53548.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 185-1] gi|300307088|gb|EFJ61608.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 200-1] gi|300318622|gb|EFJ68406.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 175-1] gi|300356864|gb|EFJ72734.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 198-1] gi|300397106|gb|EFJ80644.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 69-1] gi|300405497|gb|EFJ89035.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 84-1] gi|300410621|gb|EFJ94159.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 45-1] gi|300414170|gb|EFJ97480.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 115-1] gi|300421077|gb|EFK04388.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 182-1] gi|300450516|gb|EFK14136.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 116-1] gi|300456424|gb|EFK19917.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 21-1] gi|300463632|gb|EFK27125.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 187-1] gi|300526444|gb|EFK47513.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 119-7] gi|300530550|gb|EFK51612.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 107-1] gi|300839705|gb|EFK67465.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 124-1] gi|300844948|gb|EFK72708.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 78-1] gi|301076715|gb|EFK91521.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 146-1] gi|305852714|gb|EFM53162.1| flagellar basal body rod protein FlgC [Escherichia coli NC101] gi|307553076|gb|ADN45851.1| flagellar basal-body rod protein FlgC [Escherichia coli ABU 83972] gi|307627456|gb|ADN71760.1| flagellar basal body rod protein FlgC [Escherichia coli UM146] gi|308118351|gb|EFO55613.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 145-7] gi|309701346|emb|CBJ00647.1| flagellar basal-body rod protein FlgC [Escherichia coli ETEC H10407] gi|310336413|gb|EFQ01599.1| flagellar basal-body rod protein FlgC [Escherichia coli 1827-70] gi|312286254|gb|EFR14167.1| flagellar basal-body rod protein FlgC [Escherichia coli 2362-75] gi|312945636|gb|ADR26463.1| flagellar basal body rod protein FlgC [Escherichia coli O83:H1 str. NRG 857C] gi|315135706|dbj|BAJ42865.1| cell-proximal portion of basal-body rod [Escherichia coli DH1] gi|315253875|gb|EFU33843.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 85-1] gi|315287371|gb|EFU46782.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 110-3] gi|315291068|gb|EFU50431.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 153-1] gi|315296705|gb|EFU56000.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 16-3] gi|315618244|gb|EFU98834.1| flagellar basal-body rod protein FlgC [Escherichia coli 3431] gi|320179226|gb|EFW54184.1| Flagellar basal-body rod protein FlgC [Shigella boydii ATCC 9905] gi|320186979|gb|EFW61692.1| Flagellar basal-body rod protein FlgC [Shigella flexneri CDC 796-83] gi|320189757|gb|EFW64413.1| Flagellar basal-body rod protein FlgC [Escherichia coli O157:H7 str. EC1212] gi|320196444|gb|EFW71067.1| Flagellar basal-body rod protein FlgC [Escherichia coli WV_060327] gi|320637525|gb|EFX07325.1| flagellar basal body rod protein FlgC [Escherichia coli O157:H7 str. G5101] gi|320643086|gb|EFX12287.1| flagellar basal body rod protein FlgC [Escherichia coli O157:H- str. 493-89] gi|320648544|gb|EFX17199.1| flagellar basal body rod protein FlgC [Escherichia coli O157:H- str. H 2687] gi|320653858|gb|EFX21932.1| flagellar basal body rod protein FlgC [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320659338|gb|EFX26907.1| flagellar basal body rod protein FlgC [Escherichia coli O55:H7 str. USDA 5905] gi|320664473|gb|EFX31624.1| flagellar basal body rod protein FlgC [Escherichia coli O157:H7 str. LSU-61] gi|323156881|gb|EFZ43015.1| flagellar basal-body rod protein FlgC [Escherichia coli EPECa14] gi|323163756|gb|EFZ49575.1| flagellar basal-body rod protein FlgC [Escherichia coli E128010] gi|323174797|gb|EFZ60412.1| flagellar basal-body rod protein FlgC [Escherichia coli LT-68] gi|323175695|gb|EFZ61289.1| flagellar basal-body rod protein FlgC [Escherichia coli 1180] gi|323185803|gb|EFZ71164.1| flagellar basal-body rod protein FlgC [Escherichia coli 1357] gi|323190586|gb|EFZ75858.1| flagellar basal-body rod protein FlgC [Escherichia coli RN587/1] gi|323937814|gb|EGB34078.1| flagellar basal-body rod protein FlgC [Escherichia coli E1520] gi|323942543|gb|EGB38710.1| flagellar basal-body rod protein FlgC [Escherichia coli E482] gi|323947624|gb|EGB43628.1| flagellar basal-body rod protein FlgC [Escherichia coli H120] gi|323953240|gb|EGB49106.1| flagellar basal-body rod protein FlgC [Escherichia coli H252] gi|323957898|gb|EGB53610.1| flagellar basal-body rod protein FlgC [Escherichia coli H263] gi|323962673|gb|EGB58251.1| flagellar basal-body rod protein FlgC [Escherichia coli H489] gi|323967015|gb|EGB62441.1| flagellar basal-body rod protein FlgC [Escherichia coli M863] gi|323973337|gb|EGB68526.1| flagellar basal-body rod protein FlgC [Escherichia coli TA007] gi|323976553|gb|EGB71641.1| flagellar basal-body rod protein FlgC [Escherichia coli TW10509] gi|324007914|gb|EGB77133.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 57-2] gi|324013348|gb|EGB82567.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 60-1] gi|324017422|gb|EGB86641.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 117-3] gi|324117355|gb|EGC11262.1| flagellar basal-body rod protein FlgC [Escherichia coli E1167] gi|326339296|gb|EGD63110.1| Flagellar basal-body rod protein FlgC [Escherichia coli O157:H7 str. 1125] gi|326344743|gb|EGD68491.1| Flagellar basal-body rod protein FlgC [Escherichia coli O157:H7 str. 1044] gi|327253473|gb|EGE65111.1| flagellar basal-body rod protein FlgC [Escherichia coli STEC_7v] gi|330910888|gb|EGH39398.1| flagellar basal-body rod protein FlgC [Escherichia coli AA86] gi|331038416|gb|EGI10636.1| flagellar basal-body rod protein FlgC [Escherichia coli H736] gi|331045084|gb|EGI17211.1| flagellar basal-body rod protein FlgC [Escherichia coli M605] gi|331050405|gb|EGI22463.1| flagellar basal-body rod protein FlgC [Escherichia coli M718] gi|331055384|gb|EGI27393.1| flagellar basal-body rod protein FlgC [Escherichia coli TA206] gi|331060902|gb|EGI32866.1| flagellar basal-body rod protein FlgC [Escherichia coli TA143] gi|331065059|gb|EGI36954.1| flagellar basal-body rod protein FlgC [Escherichia coli TA271] gi|331070237|gb|EGI41603.1| flagellar basal-body rod protein FlgC [Escherichia coli TA280] gi|331075554|gb|EGI46852.1| flagellar basal-body rod protein FlgC [Escherichia coli H591] gi|331080207|gb|EGI51386.1| flagellar basal-body rod protein FlgC [Escherichia coli H299] gi|332094031|gb|EGI99083.1| flagellar basal-body rod protein FlgC [Shigella boydii 3594-74] gi|332102090|gb|EGJ05436.1| flagellar rod protein FlgC [Shigella sp. D9] gi|332342620|gb|AEE55954.1| flagellar basal-body rod protein FlgC [Escherichia coli UMNK88] Length = 134 Score = 52.6 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 6/43 (13%), Positives = 22/43 (51%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G+++ N + + EM + ++ + + +++ + ML+ + Sbjct: 89 GYVKMPNVDVVGEMVNTMSASRSYQANVEVLNTVKSMMLKTLT 131 Score = 39.1 bits (89), Expect = 0.56, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 6/47 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42 F+I +A A QRL+ A N++N G +R +V F Sbjct: 4 LNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRAKQVVFQ 50 >gi|330811237|ref|YP_004355699.1| flagellar basal-body rod protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379345|gb|AEA70695.1| Putative flagellar basal-body rod protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 147 Score = 52.6 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 30/72 (41%), Gaps = 6/72 (8%) Query: 168 GFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 G V +++ + P P D G++ N N + EM MI ++ F + ++ Sbjct: 79 GVVEDQSNLEARYEPNHPAADAK------GYVYYPNVNVVEEMADMISASRSFQTNAEMM 132 Query: 228 DENEKSMLEAIR 239 + + M + + Sbjct: 133 NTAKTMMQKVLT 144 Score = 40.6 bits (93), Expect = 0.18, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 6/56 (10%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQ 54 FNI +A A RL+TVA N++N +TV +R F+ + ++ Sbjct: 7 FNIAGSAMSAQTTRLNTVASNIANAETVSSSIDQTYRARHPVFATMFQGGQSGGSD 62 >gi|266621920|ref|ZP_06114855.1| flagellar basal-body rod protein FlgC [Clostridium hathewayi DSM 13479] gi|288866393|gb|EFC98691.1| flagellar basal-body rod protein FlgC [Clostridium hathewayi DSM 13479] Length = 144 Score = 52.6 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 23/46 (50%), Gaps = 1/46 (2%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G++ N NS EM ++ T+ + + T ++ + L+A+ I Sbjct: 99 GYVMMPNVNSAEEMVDLMAATRAYEANVTALNIAKSMALKAL-EIG 143 >gi|256371026|ref|YP_003108850.1| flagellar hook-associated protein FlgK [Acidimicrobium ferrooxidans DSM 10331] gi|256007610|gb|ACU53177.1| flagellar hook-associated protein FlgK [Acidimicrobium ferrooxidans DSM 10331] Length = 462 Score = 52.6 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 11/37 (29%), Positives = 20/37 (54%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 + I L+ A + L VA N++N +T G+++ V Sbjct: 5 ALYIALSGLEAQQVGLDVVAQNVANANTPGYQSESVD 41 >gi|304558598|gb|ADM41262.1| Flagellar hook-associated protein FlgK [Edwardsiella tarda FL6-60] Length = 546 Score = 52.6 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 18/167 (10%), Positives = 45/167 (26%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M N ++ A + L+ ++N++N T G+ V F+E G V Sbjct: 1 MANLINNAMSGLSAAQTALAVTSNNINNVYTAGYNRQSVSFAENNGTSTPAGFIGNGVVV 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 SG + + +FA + ++ + Sbjct: 61 SGINREYNQFIVNQLRQGQSEFATTSTYHKQISQIDDLLADSTNSLSANMQNFFKNLQNL 120 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 ++ + K + + ++ + ++ Sbjct: 121 VSYPSDSAARQTVISNANGLTAQFKTTDAYLRNLESSTNATVSNNAE 167 >gi|260437431|ref|ZP_05791247.1| flagellar hook-associated protein FlgK [Butyrivibrio crossotus DSM 2876] gi|292810063|gb|EFF69268.1| flagellar hook-associated protein FlgK [Butyrivibrio crossotus DSM 2876] Length = 579 Score = 52.6 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 20/40 (50%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 +GL+ L+T A+N++N +T G+ +V + Sbjct: 5 GLYVGLSGLQTSSNSLNTTANNLANVNTSGYVRQQVVNGD 44 Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 8/35 (22%), Positives = 16/35 (45%) Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 E+ MI Q +N+ + I+ + + I N+ Sbjct: 543 EELSNMIKFQQAYNASSRFINVIDDMIQTLINNLG 577 >gi|157376218|ref|YP_001474818.1| flagellar basal body rod protein FlgC [Shewanella sediminis HAW-EB3] gi|157318592|gb|ABV37690.1| flagellar basal-body rod protein FlgC [Shewanella sediminis HAW-EB3] Length = 138 Score = 52.6 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 20/43 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 GF+ N N M EM MI ++ + + + + + + +R Sbjct: 93 GFIYKPNVNVMEEMANMISASRSYQMNVQVAEAAKSMLQQTLR 135 Score = 37.2 bits (84), Expect = 2.0, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 26/82 (31%), Gaps = 6/82 (7%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKISF 58 FN+ + A RL+T A N++N D V +R F + + + Sbjct: 7 FNVAGSGMSAQSVRLNTTASNIANADAVSSSVDETYRARHPIFEAEMAKASHQQQSSQAV 66 Query: 59 VASGKEYLSKEVGSFISTGTEL 80 G + S + Sbjct: 67 AVKGIVESDAPLQKEYSPDHPM 88 >gi|90021858|ref|YP_527685.1| GTP-binding protein LepA [Saccharophagus degradans 2-40] gi|89951458|gb|ABD81473.1| flagellar basal-body rod protein FlgB [Saccharophagus degradans 2-40] Length = 134 Score = 52.6 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 9/51 (17%), Positives = 22/51 (43%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 + I +A +R +A+N++N +T G++ + F + + Sbjct: 6 DKALGIYESALSLRSERAGVLANNLANVNTPGYKARDIDFQQALKDSMGQG 56 >gi|301168512|emb|CBW28102.1| putative flagellar hook-associated protein 1 [Bacteriovorax marinus SJ] Length = 487 Score = 52.6 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 35/98 (35%), Gaps = 5/98 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M NIG A ++ L T N+SN +T G+ +V I + + Sbjct: 1 MSDLLNIGRTGLNASKKSLETTGHNISNVNTEGYSRQRVN-----QTTNTPITKGGTVHG 55 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98 +G S + L+ A+ D +F + R Sbjct: 56 TGVRVKSVTRINDDFINKRLEKAISNDRFFEQRAERMT 93 Score = 40.2 bits (92), Expect = 0.28, Method: Composition-based stats. Identities = 3/35 (8%), Positives = 11/35 (31%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 + E M+ + + ++ ++ I Sbjct: 449 VSIDEEAANMVKFQHAYEASAKIMQTADEMFKTVI 483 >gi|323498422|ref|ZP_08103418.1| flagellar basal body rod protein FlgC [Vibrio sinaloensis DSM 21326] gi|323316495|gb|EGA69510.1| flagellar basal body rod protein FlgC [Vibrio sinaloensis DSM 21326] Length = 138 Score = 52.6 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 23/43 (53%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N M EM MI ++ + + + D +++ +L ++ Sbjct: 93 GYIYKPNVNVMEEMANMISASRSYQTNVQVADASKQMLLRTLQ 135 >gi|119469948|ref|ZP_01612753.1| flagellar biosynthesis; cell-proximal portion of basal-body rod [Alteromonadales bacterium TW-7] gi|119446658|gb|EAW27931.1| flagellar biosynthesis; cell-proximal portion of basal-body rod [Alteromonadales bacterium TW-7] Length = 143 Score = 52.6 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 21/42 (50%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N N + EM MI ++ + + + D ++ + + + Sbjct: 97 GYIYKPNVNVVEEMANMISASRSYETNVQVADAAKQMLSKTL 138 Score = 39.1 bits (89), Expect = 0.59, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 24/59 (40%), Gaps = 6/59 (10%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQK 55 F+I + A RL+T A N+SN +T+ +R + F+ + + Sbjct: 5 NVFDIAGSGMSAQNVRLNTTASNISNANTISSSQDKTYRARQPVFAAELTKASESVSNN 63 >gi|89100618|ref|ZP_01173476.1| flagellar hook-associated protein K [Bacillus sp. NRRL B-14911] gi|89084642|gb|EAR63785.1| flagellar hook-associated protein K [Bacillus sp. NRRL B-14911] Length = 527 Score = 52.6 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 14/107 (13%), Positives = 30/107 (28%), Gaps = 1/107 (0%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + L N++N +T GF ++ F + +++ G Sbjct: 2 GLETARRGMFTQQSALYVTGHNIANANTPGFSRQRINFEQTSPYPAASMNRPQVPGQMGT 61 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTD 110 + V +L + +E + S LT+ Sbjct: 62 GVEAGSVQRIREGFLDLQYRVEANK-VGYYSSMSESLTKMEEIMNEP 107 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 8/41 (19%), Positives = 16/41 (39%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S + EM MI +N+ I ++ + + I + Sbjct: 483 SAVSLDEEMTNMIKFQHAYNAAARNITVVDEMLDKIINGMG 523 >gi|46202499|ref|ZP_00053126.2| COG1749: Flagellar hook protein FlgE [Magnetospirillum magnetotacticum MS-1] Length = 354 Score = 52.6 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 22/137 (16%), Positives = 37/137 (27%) Query: 100 LTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG 159 LT+ T Y M V I K K + V + Sbjct: 212 LTQFSGDTSTKMSVKNIDQDGYASGTMDQVEIDTAGKVVAHFDNGKSRTIFQIPVATFVS 271 Query: 160 LYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 +D G V R SG ++ LE SN + +MI + Sbjct: 272 ADQLDPISGTVFRATEQAGDITIAAISAQGSGASIVASSLEASNVALEDQFSKMIVTQKA 331 Query: 220 FNSITTLIDENEKSMLE 236 +++ + ++ Sbjct: 332 YSTNANVFKTADEMTQT 348 >gi|254508426|ref|ZP_05120546.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus 16] gi|219548636|gb|EED25641.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus 16] Length = 138 Score = 52.6 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 23/43 (53%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N M EM MI ++ + + + D +++ +L ++ Sbjct: 93 GYIYKPNVNVMEEMANMISASRSYQTNVQVADASKQMLLRTLQ 135 Score = 35.2 bits (79), Expect = 8.9, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 31/84 (36%), Gaps = 6/84 (7%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56 FN+ +A A RL+T + N++N D+V ++ F + K D + Sbjct: 5 NVFNVTGSAMSAESVRLNTTSSNLANADSVSSSAKDTYKARHAVFGAELSKAKYGNDHTV 64 Query: 57 SFVASGKEYLSKEVGSFISTGTEL 80 G K + + + L Sbjct: 65 PVKVMGIVESDKPLSAEYNPDHPL 88 >gi|149188064|ref|ZP_01866359.1| flagellar basal-body rod protein C [Vibrio shilonii AK1] gi|148838052|gb|EDL54994.1| flagellar basal-body rod protein C [Vibrio shilonii AK1] Length = 138 Score = 52.6 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 23/43 (53%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N M EM MI ++ + + + D +++ +L +R Sbjct: 93 GYIYKPNVNVMEEMANMISASRSYQTNVQVADASKQMLLSTLR 135 >gi|20807892|ref|NP_623063.1| flagellar basal body protein [Thermoanaerobacter tengcongensis MB4] gi|20516457|gb|AAM24667.1| Flagellar basal body protein [Thermoanaerobacter tengcongensis MB4] Length = 131 Score = 52.6 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 22/41 (53%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51 A R + +A+N++N DT F+ +VKF E++ N Sbjct: 11 GLYAATVRSNVIANNIANVDTPNFKRSEVKFEEILQEALNG 51 >gi|54297188|ref|YP_123557.1| flagellar hook-associated protein FlgK [Legionella pneumophila str. Paris] gi|53750973|emb|CAH12384.1| flagellar hook-associated protein 1 [Legionella pneumophila str. Paris] Length = 649 Score = 52.6 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 18/132 (13%), Positives = 49/132 (37%), Gaps = 1/132 (0%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + NI + A ++ L +N++N T G+ ++F+ + + + + V+ Sbjct: 1 MSILNIAYSGLNAFQRALDVTGNNIANFKTRGYSRQSIQFTPI-ASNRYAGSYIGAGVSV 59 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 Y + + + + L + + DA++ +L++DG + + G+ Sbjct: 60 SSIYRNVDQFANAQVRSTLSYRTQYDAFYNQAIQIDKLLSQDGSSISVPLQTFFDSIGQL 119 Query: 122 PVLDMASVPIQI 133 + Sbjct: 120 NSTPDNIATRGV 131 >gi|229592132|ref|YP_002874251.1| flagellar basal body rod protein FlgC [Pseudomonas fluorescens SBW25] gi|229363998|emb|CAY51548.1| putative flagellar basal-body rod protein [Pseudomonas fluorescens SBW25] Length = 147 Score = 52.6 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 30/72 (41%), Gaps = 6/72 (8%) Query: 168 GFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 G V +++ + P P + G++ N N + EM MI ++ F + ++ Sbjct: 79 GVVEDQSNLEARYEPNHPAANEK------GYVYYPNVNVVEEMADMISASRSFQTNAEMM 132 Query: 228 DENEKSMLEAIR 239 + + M + + Sbjct: 133 NTAKTMMQKVLT 144 Score = 41.8 bits (96), Expect = 0.075, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 6/56 (10%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQ 54 FNI + A RL+TVA N++N +TV +R F+ + ++ Sbjct: 7 FNIAGSGMSAQTTRLNTVASNIANAETVSSSIDQTYRARHPVFATMFQGGQSGGSD 62 >gi|311694367|gb|ADP97240.1| flagellar hook-associated protein FlgK [marine bacterium HP15] Length = 676 Score = 52.6 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 30/88 (34%), Gaps = 3/88 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M IGL L+ + L+T +N++N +T G+ +V F Sbjct: 1 MAGLIGIGLTGILSHQAALNTTGNNITNANTPGYSRQEVLFET---QEGQRTGAGTIGSG 57 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDA 88 + + ++ D L G+ Sbjct: 58 VNVADIRRLANEYLVQQVREDSTLYGEQ 85 >gi|240145509|ref|ZP_04744110.1| flagellar basal-body rod protein FlgC [Roseburia intestinalis L1-82] gi|257202324|gb|EEV00609.1| flagellar basal-body rod protein FlgC [Roseburia intestinalis L1-82] gi|291536000|emb|CBL09112.1| flagellar basal-body rod protein FlgC [Roseburia intestinalis M50/1] gi|291538494|emb|CBL11605.1| flagellar basal-body rod protein FlgC [Roseburia intestinalis XB6B4] Length = 146 Score = 52.6 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 22/43 (51%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N++ EM +I T+ + + TT D + + A+ Sbjct: 101 GYVTYPNVNTVTEMTNLIDATRAYEANTTAFDATKSMVQAALN 143 Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 6/47 (12%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43 +F+I + A R+ T+A N++N +T G +R V F+E Sbjct: 5 QAFDISASGMTAERFRMDTIAQNIANINTTRTEDGTPYRRKIVTFAE 51 >gi|117928040|ref|YP_872591.1| flagellar hook-associated protein FlgK [Acidothermus cellulolyticus 11B] gi|117648503|gb|ABK52605.1| flagellar hook-associated protein FlgK [Acidothermus cellulolyticus 11B] Length = 463 Score = 52.6 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 24/58 (41%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 S + L A A + L N++N T G+ + F + G++ + + V + Sbjct: 7 SLSTALTALQAERKALEVTGQNIANASTSGYTRQRAVFQGIGGSVVPAMYSRSDGVGA 64 Score = 38.7 bits (88), Expect = 0.66, Method: Composition-based stats. Identities = 4/39 (10%), Positives = 12/39 (30%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S + E +I +++ + + + I Sbjct: 421 ASGVDLDEEQTNLITFQHAYDAAAKYLSVIDSILDTLIN 459 >gi|258514000|ref|YP_003190222.1| flagellar basal-body rod protein FlgB [Desulfotomaculum acetoxidans DSM 771] gi|257777705|gb|ACV61599.1| flagellar basal-body rod protein FlgB [Desulfotomaculum acetoxidans DSM 771] Length = 134 Score = 52.6 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 20/42 (47%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 A A R +A+N++N +T GF+ V F ++ N Sbjct: 15 AIDAGSLRQRVIANNIANINTPGFKKSSVAFESILKKNLNTG 56 >gi|148358812|ref|YP_001250019.1| hypothetical protein LPC_0694 [Legionella pneumophila str. Corby] gi|296106857|ref|YP_003618557.1| flagellar hook-associated protein 1 FlgK [Legionella pneumophila 2300/99 Alcoy] gi|148280585|gb|ABQ54673.1| hypothetical protein LPC_0694 [Legionella pneumophila str. Corby] gi|295648758|gb|ADG24605.1| flagellar hook-associated protein 1 FlgK [Legionella pneumophila 2300/99 Alcoy] Length = 649 Score = 52.6 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 18/132 (13%), Positives = 49/132 (37%), Gaps = 1/132 (0%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + NI + A ++ L +N++N T G+ ++F+ + + + + V+ Sbjct: 1 MSILNIAYSGLNAFQRALDVTGNNIANFKTRGYSRQSIQFTPI-ASNRYAGSYIGAGVSV 59 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 Y + + + + L + + DA++ +L++DG + + G+ Sbjct: 60 SSIYRNVDQFANAQVRSTLSYRTQYDAFYNQAIQIDKLLSQDGSSISVPLQTFFDSIGQL 119 Query: 122 PVLDMASVPIQI 133 + Sbjct: 120 NSTPDNIATRGV 131 >gi|15642858|ref|NP_227899.1| flagellar hook-associated protein 1 [Thermotoga maritima MSB8] gi|4980572|gb|AAD35177.1|AE001695_3 flagellar hook-associated protein 1 [Thermotoga maritima MSB8] Length = 858 Score = 52.6 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 16/43 (37%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 M N L A + ++ V N++N T G+ + Sbjct: 6 MFGILNTALTGIHAHKLAMNIVGHNIANASTPGYSRQRPVIEA 48 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 7/39 (17%), Positives = 15/39 (38%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 + EM MI F++ +I ++ + I + Sbjct: 820 VSLDEEMANMIEYQHAFSAAAKVITAVDQMIQTVINMVG 858 >gi|218549198|ref|YP_002382989.1| flagellar basal body rod protein FlgC [Escherichia fergusonii ATCC 35469] gi|218356739|emb|CAQ89367.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia fergusonii ATCC 35469] gi|324113869|gb|EGC07843.1| flagellar basal-body rod protein FlgC [Escherichia fergusonii B253] gi|325497618|gb|EGC95477.1| flagellar basal body rod protein FlgC [Escherichia fergusonii ECD227] Length = 134 Score = 52.6 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 6/43 (13%), Positives = 22/43 (51%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G+++ N + + EM + ++ + + +++ + ML+ + Sbjct: 89 GYVKMPNVDVVGEMVNTMSASRSYQANVEVLNTVKSMMLKTLT 131 Score = 38.3 bits (87), Expect = 1.0, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 6/47 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42 F+I +A A QRL+ A N++N G +R V F Sbjct: 4 LNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRAKHVVFQ 50 >gi|1857438|gb|AAC45656.1| FlgC [Proteus mirabilis] Length = 134 Score = 52.6 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 6/42 (14%), Positives = 20/42 (47%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N + + EM I ++ + + +++ + M + + Sbjct: 89 GYVRKPNVDVVGEMINTISASRSYQANVEVMNTAKSLMQKTL 130 Score = 35.6 bits (80), Expect = 5.7, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 29/79 (36%), Gaps = 6/79 (7%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSEVVGAIKNDIDQKI 56 + F+I +A A QRL+ A NM+N VG +R +V F A + + Sbjct: 5 SIFDISGSALSAQSQRLNVSASNMANVDSVVGPDGEPYRAKQVVFQVNAPAGQEIGGVHV 64 Query: 57 SFVASGKEYLSKEVGSFIS 75 + V E Sbjct: 65 TQVVDDPTPFRMEYQPGNP 83 >gi|304404242|ref|ZP_07385904.1| flagellar basal-body rod protein FlgC [Paenibacillus curdlanolyticus YK9] gi|304347220|gb|EFM13052.1| flagellar basal-body rod protein FlgC [Paenibacillus curdlanolyticus YK9] Length = 149 Score = 52.6 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 20/42 (47%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N + EM MI ++ + + T ++ + +A+ Sbjct: 104 GYVSMPNVDIAKEMIDMISASRSYEANITALNATKGMFAKAL 145 Score = 41.4 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 7/30 (23%), Positives = 15/30 (50%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV 32 F+ +A A R+ ++ N++N +T Sbjct: 5 NGFDANASALTAQRLRMDVISSNIANAETT 34 >gi|149182501|ref|ZP_01860974.1| flagellar basal-body rod protein C [Bacillus sp. SG-1] gi|148849761|gb|EDL63938.1| flagellar basal-body rod protein C [Bacillus sp. SG-1] Length = 153 Score = 52.6 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 9/44 (20%), Positives = 26/44 (59%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 + G+++ N + + EM +I T+ + + T+ + N+ M++++ Sbjct: 106 QDGYVQMPNVDPLREMIDLISATRSYEANVTVFNANKSMMMKSL 149 Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 10/29 (34%), Positives = 15/29 (51%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTV 32 S N +A A R+ ++ NM+N DT Sbjct: 6 SMNTSASALSAQRLRMDVISSNMANADTT 34 >gi|88858137|ref|ZP_01132779.1| flagellar hook-associated protein [Pseudoalteromonas tunicata D2] gi|88819754|gb|EAR29567.1| flagellar hook-associated protein [Pseudoalteromonas tunicata D2] Length = 681 Score = 52.6 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 14/105 (13%), Positives = 34/105 (32%), Gaps = 8/105 (7%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 G++ A ++ L T N++N +T G+ V+ + + V G Sbjct: 6 LGTGVSGLAAAQKGLDTTGHNIANVNTTGYNRQTVE-------QISTVGIPFGGVFLGNG 58 Query: 65 YLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109 + + + + + + F + + +R F Sbjct: 59 TQVSSISRAFNEFSYTEV-IYNKSQFNYNNTQTTNASRLDNFLAN 102 Score = 36.8 bits (83), Expect = 3.1, Method: Composition-based stats. Identities = 6/41 (14%), Positives = 16/41 (39%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E +I Q +++ +I ++ ++ + Sbjct: 641 SGVNLDEEAANLIRYQQAYSAAARIISIANETFDSLLQAVR 681 >gi|269961597|ref|ZP_06175959.1| Flagellar basal-body rod protein flgC [Vibrio harveyi 1DA3] gi|269833638|gb|EEZ87735.1| Flagellar basal-body rod protein flgC [Vibrio harveyi 1DA3] Length = 124 Score = 52.6 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 23/43 (53%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N M EM MI ++ + + + D +++ +L ++ Sbjct: 79 GYIYKPNVNVMEEMANMISASRAYQTNVQVADSSKQMLLRTLQ 121 >gi|197285512|ref|YP_002151384.1| flagellar basal-body rod protein [Proteus mirabilis HI4320] gi|227356003|ref|ZP_03840395.1| flagellar basal-body rod protein [Proteus mirabilis ATCC 29906] gi|194682999|emb|CAR43448.1| flagellar basal-body rod protein [Proteus mirabilis HI4320] gi|227163991|gb|EEI48893.1| flagellar basal-body rod protein [Proteus mirabilis ATCC 29906] Length = 134 Score = 52.6 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 6/42 (14%), Positives = 20/42 (47%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N + + EM I ++ + + +++ + M + + Sbjct: 89 GYVRKPNVDVVGEMINTISASRSYQANVEVMNTAKSLMQKTL 130 Score = 36.0 bits (81), Expect = 4.7, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 30/79 (37%), Gaps = 6/79 (7%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSEVVGAIKNDIDQKI 56 + F+I +A A QRL+ A NM+N VG +R +V F A ++ + Sbjct: 5 SIFDISGSALSAQSQRLNVSASNMANVDSVVGPDGEPYRAKQVVFQVNAPAGQDIGGVHV 64 Query: 57 SFVASGKEYLSKEVGSFIS 75 + V E Sbjct: 65 TQVVDDPTPFRMEYQPGNP 83 >gi|88811799|ref|ZP_01127053.1| flagellar basal body rod protein [Nitrococcus mobilis Nb-231] gi|88791190|gb|EAR22303.1| flagellar basal body rod protein [Nitrococcus mobilis Nb-231] Length = 139 Score = 52.6 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 23/43 (53%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ SN N++ M MI ++ + + ++ + +L+ +R Sbjct: 94 GYVYRSNVNTVEAMVNMISASRSYQNNVEVVSTSRDLLLQTLR 136 Score = 42.2 bits (97), Expect = 0.063, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 29/92 (31%), Gaps = 10/92 (10%) Query: 1 MQTSFN----IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKN 50 M + + +A A RL+ A NM+N DTV ++ + F+ + + Sbjct: 1 MIMALFDIFDVAGSAMSAQALRLNITASNMANADTVASTPERAYKARQPVFAAALNTAHD 60 Query: 51 DIDQKISFVASGKEYLSKEVGSFISTGTELDF 82 + + + + D Sbjct: 61 TVSAVPVQLRGVVTSSAAAEPLYQPNNPLADA 92 >gi|260597443|ref|YP_003210014.1| flagellar basal body rod protein FlgC [Cronobacter turicensis z3032] gi|260216620|emb|CBA29913.1| Flagellar basal-body rod protein flgC [Cronobacter turicensis z3032] Length = 134 Score = 52.6 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 6/43 (13%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N + + EM + ++ + + +++ + ML+ + Sbjct: 89 GYVRMPNVDVVGEMVNSMSASRSYQANVEVLNTVKSMMLKTLT 131 Score = 39.1 bits (89), Expect = 0.52, Method: Composition-based stats. Identities = 15/105 (14%), Positives = 29/105 (27%), Gaps = 7/105 (6%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDT-VG-----FRTIKVKFS-EVVGAIKNDIDQ 54 F+I +A A +R++ A N++N D+ G +R +V F + + Sbjct: 4 LNIFDIAGSAMTAQSKRMNVAASNLANADSATGPDGQPYRAKQVIFQVDAAPGAATGGVK 63 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 V S + + Sbjct: 64 VTDVVESQAPDKLVYEPGNPLADAKGYVRMPNVDVVGEMVNSMSA 108 >gi|212639569|ref|YP_002316089.1| flagellar basal body rod protein FlgC [Anoxybacillus flavithermus WK1] gi|212561049|gb|ACJ34104.1| Flagellar basal body rod protein FlgC [Anoxybacillus flavithermus WK1] Length = 145 Score = 52.6 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 7/42 (16%), Positives = 25/42 (59%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G+++ N + + EM ++ T+ + + T+++ + +++A+ Sbjct: 100 GYVQLPNVDPLKEMVDLMSATRSYEANVTVLNATKGMLMKAL 141 Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 12/32 (37%), Positives = 18/32 (56%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32 M SFN+ +A A R+ ++ NM+N DT Sbjct: 1 MFQSFNVSASALTAQRLRMDVISANMANVDTT 32 >gi|156934442|ref|YP_001438358.1| flagellar basal body rod protein FlgC [Cronobacter sakazakii ATCC BAA-894] gi|156532696|gb|ABU77522.1| hypothetical protein ESA_02273 [Cronobacter sakazakii ATCC BAA-894] Length = 134 Score = 52.6 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 6/43 (13%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N + + EM + ++ + + +++ + ML+ + Sbjct: 89 GYVRMPNVDVVGEMVNSMSASRSYQANVEVLNTVKSMMLKTLT 131 Score = 39.5 bits (90), Expect = 0.39, Method: Composition-based stats. Identities = 15/105 (14%), Positives = 29/105 (27%), Gaps = 7/105 (6%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDT-VG-----FRTIKVKFS-EVVGAIKNDIDQ 54 F+I +A A +R++ A N++N D+ G +R +V F + + Sbjct: 4 LNIFDIAGSAMTAQSKRMNVAASNLANADSATGPDGQPYRAKQVVFQVDAAPGAATGGVK 63 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 V S + + Sbjct: 64 VTDVVESQAPDKLVYEPGNPLADAKGYVRMPNVDVVGEMVNSMSA 108 >gi|312962590|ref|ZP_07777080.1| flagellar basal-body rod protein FlgC [Pseudomonas fluorescens WH6] gi|311283170|gb|EFQ61761.1| flagellar basal-body rod protein FlgC [Pseudomonas fluorescens WH6] Length = 147 Score = 52.6 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 30/72 (41%), Gaps = 6/72 (8%) Query: 168 GFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 G V +++ + P P + G++ N N + EM MI ++ F + ++ Sbjct: 79 GVVEDQSNLEARYEPNHPAANEK------GYVYYPNVNVVEEMADMISASRSFQTNAEMM 132 Query: 228 DENEKSMLEAIR 239 + + M + + Sbjct: 133 NTAKTMMQKVLT 144 Score = 42.9 bits (99), Expect = 0.036, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 6/56 (10%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQ 54 FNI + A RL+TVA N++N +TV +R F+ + A +N Sbjct: 7 FNIAGSGMSAQTTRLNTVASNIANAETVSSSIDQTYRARHPVFATMFQAGQNGGSD 62 >gi|157692298|ref|YP_001486760.1| flagellar basal body rod protein FlgC [Bacillus pumilus SAFR-032] gi|157681056|gb|ABV62200.1| flagellar basal body rod protein [Bacillus pumilus SAFR-032] Length = 150 Score = 52.6 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 25/42 (59%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G+++ N + + EM +I ++ + + T ++ N+ +++A+ Sbjct: 105 GYVQTPNVDPLKEMVDLISSSRSYEANVTALNANKSMLMKAL 146 Score = 42.9 bits (99), Expect = 0.043, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 37/114 (32%), Gaps = 17/114 (14%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV------G----FRTIKV-------KFSEVV 45 + N +A A R+ V+ N++N DT G +R V FS ++ Sbjct: 5 SGVNASASALTAQRLRMDVVSSNLANMDTTRAKQVDGNWEPYRRKLVTLQPSGESFSSIL 64 Query: 46 GAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 + N + + V + K + + T D G P + Sbjct: 65 NSSMNSSGKLGNGVKATKITEDETPFNLQYDPTNPDANENGYVQTPNVDPLKEM 118 >gi|120598230|ref|YP_962804.1| flagellar basal body rod protein FlgC [Shewanella sp. W3-18-1] gi|146293692|ref|YP_001184116.1| flagellar basal body rod protein FlgC [Shewanella putrefaciens CN-32] gi|120558323|gb|ABM24250.1| flagellar basal-body rod protein FlgC [Shewanella sp. W3-18-1] gi|145565382|gb|ABP76317.1| flagellar basal-body rod protein FlgC [Shewanella putrefaciens CN-32] gi|319427091|gb|ADV55165.1| flagellar basal-body rod protein FlgC [Shewanella putrefaciens 200] Length = 138 Score = 52.6 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 19/42 (45%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 GF+ N N M EM MI ++ + + + + + + + Sbjct: 93 GFIYKPNVNVMEEMADMISASRSYQMNVQVAEAAKSMLQQTL 134 Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 25/58 (43%), Gaps = 6/58 (10%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQ 54 + F++ + A RL+T A N++N D+V +R+ F + ++ Sbjct: 5 SIFDVAGSGMSAQSVRLNTTASNIANADSVSSSIDKTYRSRHPIFEAEMAKAQSQQQT 62 >gi|318605240|emb|CBY26738.1| flagellar basal-body rod protein FlgC [Yersinia enterocolitica subsp. palearctica Y11] Length = 134 Score = 52.6 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 20/43 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N + EM I ++ + + +++ + ML+ + Sbjct: 89 GYVRMPNVDVTGEMVNTISASRSYQANVEVLNTTKSLMLKTLT 131 Score = 37.9 bits (86), Expect = 1.4, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 22/58 (37%), Gaps = 6/58 (10%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSEVVGAIKNDID 53 F+I +A A QRL+ A NM+N G +R +V F + Sbjct: 4 LNIFDIAGSALSAQSQRLNVSASNMANADSVTGPDGQPYRAKQVVFQVAAQPGQETGG 61 >gi|42524765|ref|NP_970145.1| flagellar basal-body rod protein [Bdellovibrio bacteriovorus HD100] gi|39576975|emb|CAE78204.1| flagellar basal-body rod protein [Bdellovibrio bacteriovorus HD100] Length = 147 Score = 52.6 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 21/42 (50%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N N M EM MI ++ + + T + ++ L A+ Sbjct: 102 GYVAYPNINLMEEMTNMIQASRSYEANVTAVQASKDMALSAL 143 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 6/52 (11%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGA 47 T I + A R++T+A N++N +T G +R V F + A Sbjct: 5 LTGMRISSSGMAAQRMRMNTIASNIANINTTQTPEGGPYRRKDVVFEAMPDA 56 >gi|46578934|ref|YP_009742.1| flagellar hook-associated protein FlgK [Desulfovibrio vulgaris str. Hildenborough] gi|46448346|gb|AAS95001.1| flagellar hook-associated protein FlgK, putative [Desulfovibrio vulgaris str. Hildenborough] gi|311232792|gb|ADP85646.1| flagellar hook-associated protein FlgK [Desulfovibrio vulgaris RCH1] Length = 698 Score = 52.6 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 31/73 (42%), Gaps = 2/73 (2%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV--VGAIKNDIDQKISFVA 60 + FN+G A + + T +N++N +T G+ +V+F E + + Q + Sbjct: 5 SLFNLGWNALNGAQSAIQTTGNNIANVNTPGYSRQEVRFEEAPTLDKFGGQMGQGVYAAE 64 Query: 61 SGKEYLSKEVGSF 73 + + S+ Sbjct: 65 VIRHFNKFLFSSY 77 Score = 39.1 bits (89), Expect = 0.61, Method: Composition-based stats. Identities = 6/38 (15%), Positives = 14/38 (36%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S N EM ++ + + L+ ++ +R Sbjct: 658 SGVNLDEEMASLVKFQHSYKAAAKLVTTADEMFQVLLR 695 >gi|327399355|ref|YP_004340224.1| flagellar basal-body rod protein FlgC [Hippea maritima DSM 10411] gi|327181984|gb|AEA34165.1| flagellar basal-body rod protein FlgC [Hippea maritima DSM 10411] Length = 137 Score = 52.6 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 18/127 (14%), Positives = 46/127 (36%) Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 +SG ++ + E G ++ V +G V+ + Sbjct: 11 SSGMSAQRLRMNIISSNIANADTVRTPEGGPYKRRDVVFEAIGYSKFSDVLKKVQVADII 70 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 P + + + K G++ N N + EM +I + + + ++ID ++++ Sbjct: 71 RDDTPPKLVYDPSNPLANKDGYVAYPNINPVIEMTNLIDAMRTYQANASVIDSAKQTIQA 130 Query: 237 AIRNIAS 243 A+ + + Sbjct: 131 ALGILRA 137 Score = 51.8 bits (122), Expect = 8e-05, Method: Composition-based stats. Identities = 19/128 (14%), Positives = 40/128 (31%), Gaps = 12/128 (9%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDIDQKIS 57 S NI + A R++ ++ N++N DTV G ++ V F + + +D+ +K+ Sbjct: 6 SMNIASSGMSAQRLRMNIISSNIANADTVRTPEGGPYKRRDVVFEAIGYSKFSDVLKKVQ 65 Query: 58 FV------ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDD 111 K G + + + Sbjct: 66 VADIIRDDTPPKLVYDPSNPLANKDGYVAYPNINPVIEMTNLIDAMRTYQANASVIDSAK 125 Query: 112 GSLVSASG 119 ++ +A G Sbjct: 126 QTIQAALG 133 >gi|213026534|ref|ZP_03340981.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 108 Score = 52.6 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 6/43 (13%), Positives = 22/43 (51%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G+++ N + + EM + ++ + + +++ + ML+ + Sbjct: 63 GYVKMPNVDVVGEMVNTMSASRSYQANIEVLNTVKSMMLKTLT 105 >gi|153940778|ref|YP_001392018.1| flagellar hook-associated protein FlgK [Clostridium botulinum F str. Langeland] gi|152936674|gb|ABS42172.1| flagellar hook-associated protein FlgK [Clostridium botulinum F str. Langeland] gi|295320033|gb|ADG00411.1| flagellar hook-associated protein FlgK [Clostridium botulinum F str. 230613] Length = 621 Score = 52.6 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 11/39 (28%), Positives = 20/39 (51%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 NIG + A + L+T + N++N T G+ +V+ Sbjct: 8 LNIGKSGMFAQQGALNTTSHNIANASTEGYSRQRVELQT 46 Score = 39.9 bits (91), Expect = 0.36, Method: Composition-based stats. Identities = 4/40 (10%), Positives = 14/40 (35%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 S + E ++ + + +I ++ + I + Sbjct: 580 SGVSMDEEFANLVQFNHCYQANAKIISTVDQLLDVVINGL 619 >gi|120603465|ref|YP_967865.1| flagellar hook-associated protein FlgK [Desulfovibrio vulgaris DP4] gi|120563694|gb|ABM29438.1| flagellar hook-associated protein FlgK [Desulfovibrio vulgaris DP4] Length = 698 Score = 52.6 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 31/73 (42%), Gaps = 2/73 (2%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV--VGAIKNDIDQKISFVA 60 + FN+G A + + T +N++N +T G+ +V+F E + + Q + Sbjct: 5 SLFNLGWNALNGAQSAIQTTGNNIANVNTPGYSRQEVRFEEAPTLDKFGGQMGQGVYAAE 64 Query: 61 SGKEYLSKEVGSF 73 + + S+ Sbjct: 65 VIRHFNKFLFSSY 77 Score = 38.3 bits (87), Expect = 1.0, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 13/37 (35%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N EM ++ + + L+ ++ + Sbjct: 658 SGVNLDEEMASLVKFQHSYKAAAKLVTTADEMFQVLL 694 >gi|225159033|ref|ZP_03725343.1| flagellar basal-body rod protein FlgC [Opitutaceae bacterium TAV2] gi|224802412|gb|EEG20674.1| flagellar basal-body rod protein FlgC [Opitutaceae bacterium TAV2] Length = 140 Score = 52.6 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 9/44 (20%), Positives = 21/44 (47%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G + N N YEM +I ++ + + ++ + + L+A+ Sbjct: 93 ASGMVTMPNVNLAYEMVDLITASRTYEANLQVVKNSRQMALKAL 136 Score = 41.4 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 21/53 (39%), Gaps = 6/53 (11%) Query: 10 AAQLALEQRLSTVADNMSNTDTV-G-----FRTIKVKFSEVVGAIKNDIDQKI 56 +A A + RL +A N++N T G ++ V F + ID Sbjct: 12 SALNAQKTRLDIIAQNIANAHTTRGPNGLPYQRQMVSFESELTNKLGQIDGVP 64 >gi|153837083|ref|ZP_01989750.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus AQ3810] gi|149749671|gb|EDM60416.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus AQ3810] Length = 457 Score = 52.6 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 20/53 (37%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54 NI L+ A L A N++N +T G+ + + V N + Sbjct: 1 MNLVNIALSGLNANRVALDVTAQNVANVNTPGYSRQQALMATVGDGKSNRLSS 53 >gi|168180854|ref|ZP_02615518.1| flagellar hook-associated protein FlgK [Clostridium botulinum NCTC 2916] gi|182668369|gb|EDT80348.1| flagellar hook-associated protein FlgK [Clostridium botulinum NCTC 2916] Length = 621 Score = 52.6 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 11/39 (28%), Positives = 20/39 (51%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 NIG + A + L+T + N++N T G+ +V+ Sbjct: 8 LNIGKSGMFAQQGALNTTSHNIANASTEGYSRQRVELQT 46 Score = 39.5 bits (90), Expect = 0.37, Method: Composition-based stats. Identities = 4/40 (10%), Positives = 14/40 (35%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 S + E ++ + + +I ++ + I + Sbjct: 580 SGVSMDEEFANLVQFNHCYQANAKIISTVDQLLDVVINGL 619 >gi|158320509|ref|YP_001513016.1| flagellar basal-body rod protein FlgB [Alkaliphilus oremlandii OhILAs] gi|158140708|gb|ABW19020.1| flagellar basal-body rod protein FlgB [Alkaliphilus oremlandii OhILAs] Length = 131 Score = 52.6 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 32/81 (39%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + NI A A +R + +N++N +T F+ V F +V+ N K + Sbjct: 1 MYNNINILTKALDASWRRNEVITNNIANAETPNFKRSDVIFEDVLREHLNASKLKGTITN 60 Query: 61 SGKEYLSKEVGSFISTGTELD 81 + ++ I + D Sbjct: 61 ANHIPINGGHLKDIQPQIKTD 81 >gi|168187558|ref|ZP_02622193.1| flagellar basal-body rod protein FlgC [Clostridium botulinum C str. Eklund] gi|169294598|gb|EDS76731.1| flagellar basal-body rod protein FlgC [Clostridium botulinum C str. Eklund] Length = 145 Score = 52.6 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 23/42 (54%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N N + EM MI T+ + + T I+ ++ ++A+ Sbjct: 100 GYVLMPNVNILNEMADMIAATRAYEANVTAINSSKNMFMKAL 141 >gi|327480018|gb|AEA83328.1| flagellar basal body rod protein FlgC [Pseudomonas stutzeri DSM 4166] Length = 147 Score = 52.6 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N + EM MI ++ F + L++ + + + + Sbjct: 102 GYVYYPNVNVVEEMADMISASRAFQTNAELMNTAKTMLQKVLT 144 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 17/80 (21%), Positives = 29/80 (36%), Gaps = 6/80 (7%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKISF 58 FNI + A RL+T++ N++N +TV +R F+ V DQ + Sbjct: 7 FNIAGSGMSAQSTRLNTISSNIANAETVSSSVDQTYRARHPVFATVFQQANGQPDQSLFA 66 Query: 59 VASGKEYLSKEVGSFISTGT 78 + +G Sbjct: 67 GQDQAGVGVQVLGVVEDQSE 86 >gi|262394941|ref|YP_003286795.1| flagellar basal-body rod protein FlgC [Vibrio sp. Ex25] gi|262338535|gb|ACY52330.1| flagellar basal-body rod protein FlgC [Vibrio sp. Ex25] Length = 137 Score = 52.6 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 23/43 (53%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N M EM MI ++ + + + D +++ +L ++ Sbjct: 92 GYIYKPNVNVMEEMANMISASRAYQTNVQVADSSKQMLLRTLQ 134 Score = 38.3 bits (87), Expect = 0.96, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 26/81 (32%), Gaps = 6/81 (7%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56 FN+ +A A RL+T + N++N D+V ++ F + D Sbjct: 5 NVFNVTGSAMSAESVRLNTTSSNLANADSVSSSAKDTYKARHAVFGAELSNAMRGGDTVP 64 Query: 57 SFVASGKEYLSKEVGSFISTG 77 V E + Sbjct: 65 VKVMGIVESDKPLSAEYNPDH 85 >gi|70731825|ref|YP_261567.1| flagellar basal body rod protein FlgC [Pseudomonas fluorescens Pf-5] gi|68346124|gb|AAY93730.1| flagellar basal-body rod protein FlgC [Pseudomonas fluorescens Pf-5] Length = 147 Score = 52.6 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 30/72 (41%), Gaps = 6/72 (8%) Query: 168 GFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 G V +++ + P P D G++ N N + EM MI ++ F + ++ Sbjct: 79 GVVEDQSNLEARYEPNHPAADAK------GYVYYPNVNVVEEMADMISASRSFQTNAEMM 132 Query: 228 DENEKSMLEAIR 239 + + M + + Sbjct: 133 NTAKTMMQKVLT 144 Score = 39.1 bits (89), Expect = 0.59, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 26/63 (41%), Gaps = 6/63 (9%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKISF 58 FNI + A RL+TVA N++N ++V +R F+ + ++ + Sbjct: 7 FNIAGSGMSAQTTRLNTVASNIANAESVSSSIDQTYRARHPVFATMFQGAQSGGSDSLFQ 66 Query: 59 VAS 61 Sbjct: 67 NQD 69 >gi|239826611|ref|YP_002949235.1| flagellar basal body rod protein FlgC [Geobacillus sp. WCH70] gi|239806904|gb|ACS23969.1| flagellar basal-body rod protein FlgC [Geobacillus sp. WCH70] Length = 150 Score = 52.2 bits (123), Expect = 5e-05, Method: Composition-based stats. Identities = 7/42 (16%), Positives = 23/42 (54%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N + + EM ++ T+ + + T+ + + +++A+ Sbjct: 105 GYVRLPNVDPLKEMVDLMSATRSYEANVTVFNATKGMLMKAL 146 Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 35/114 (30%), Gaps = 17/114 (14%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV------G----FRTIKVK-------FSEVV 45 S +I +A A R+ ++ NM+N DT G +R V FS + Sbjct: 5 QSLDITASALTAQRLRMDVISSNMANVDTTHARLVNGQWEPYRRKFVVMEPRQEGFSTYL 64 Query: 46 GAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 A N + V K + + + D G P + Sbjct: 65 QAAMNSRSSVGNGVRVTKIMEDQTPFKLVYDPSHPDADPNGYVRLPNVDPLKEM 118 >gi|220913735|ref|YP_002489044.1| flagellar basal-body rod protein FlgB [Arthrobacter chlorophenolicus A6] gi|219860613|gb|ACL40955.1| flagellar basal-body rod protein FlgB [Arthrobacter chlorophenolicus A6] Length = 113 Score = 52.2 bits (123), Expect = 5e-05, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 34/82 (41%), Gaps = 2/82 (2%) Query: 1 MQTSFNIGL--AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 M S +A L R T+A+N++N +T ++ +V F + + A + S Sbjct: 1 MLESVTSAALASALDGLALRQRTIANNIANINTPNYKAKRVSFEDELAASVRRGNGHTSA 60 Query: 59 VASGKEYLSKEVGSFISTGTEL 80 ++ G+ ++ TE Sbjct: 61 SVEASLEPTQLNGNNVNLDTET 82 >gi|171059414|ref|YP_001791763.1| flagellar basal-body rod protein FlgC [Leptothrix cholodnii SP-6] gi|170776859|gb|ACB34998.1| flagellar basal-body rod protein FlgC [Leptothrix cholodnii SP-6] Length = 136 Score = 52.2 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 25/43 (58%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ SN N++ EM MI ++ + + +++ + +L+ ++ Sbjct: 89 GYVTYSNVNAVEEMVNMISASRSYQNNVEVMNTAKTLLLKTLQ 131 Score = 44.5 bits (103), Expect = 0.013, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 38/109 (34%), Gaps = 6/109 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQ 54 M FN+ +A A QRL+ VA N++N DTV F+ +V F V Sbjct: 3 MLNIFNVAGSAVSAQSQRLNAVATNLANADTVAGPDGQSFKARQVMFQSVQMGEMGAAGV 62 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103 K+S + + + + + E I +R Sbjct: 63 KVSQITEDQSPGRRVHDPKHPQADAEGYVTYSNVNAVEEMVNMISASRS 111 >gi|296531743|ref|ZP_06894568.1| flagellar hook-associated protein FlgK [Roseomonas cervicalis ATCC 49957] gi|296267926|gb|EFH13728.1| flagellar hook-associated protein FlgK [Roseomonas cervicalis ATCC 49957] Length = 485 Score = 52.2 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 10/52 (19%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGF-RTIKVKFSEVVGAIKNDIDQ 54 + + L++ A +++ + +++N++N +T G+ R + +V I + +D Sbjct: 6 ALSNALSSLAAEQRQAAILSNNIANANTPGYVRRDMPRSERLVAGIGSGVDT 57 Score = 36.0 bits (81), Expect = 4.6, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 19/43 (44%), Gaps = 3/43 (6%) Query: 200 EDSN---ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E SN N E+ +++ + Q +++ +I + + E Sbjct: 440 ELSNKTAVNVDEELQRLLLVQQTYSASVQIIQAATRMLDELAT 482 >gi|312109475|ref|YP_003987791.1| flagellar hook-associated protein FlgK [Geobacillus sp. Y4.1MC1] gi|311214576|gb|ADP73180.1| flagellar hook-associated protein FlgK [Geobacillus sp. Y4.1MC1] Length = 534 Score = 52.2 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 8/41 (19%), Positives = 19/41 (46%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S+ + EM MI +N+ +I ++ + + I ++ Sbjct: 490 SSVSLDEEMTNMIKFQHAYNAAARMITAIDEMLDKIINDMG 530 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 21/46 (45%), Gaps = 3/46 (6%) Query: 1 MQTSFN---IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 M ++F+ + + L A N++N +T G+ +V F E Sbjct: 1 MLSTFHGLEVAKRGMFTQQAALYVTAHNIANANTPGYSRQRVNFVE 46 >gi|28900128|ref|NP_799783.1| putative flagellar hook-associated protein [Vibrio parahaemolyticus RIMD 2210633] gi|260365778|ref|ZP_05778274.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus K5030] gi|260880700|ref|ZP_05893055.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus AN-5034] gi|260897694|ref|ZP_05906190.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus Peru-466] gi|28808411|dbj|BAC61616.1| putative flagellar hook-associated protein [Vibrio parahaemolyticus RIMD 2210633] gi|308086274|gb|EFO35969.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus Peru-466] gi|308092694|gb|EFO42389.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus AN-5034] gi|308114946|gb|EFO52486.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus K5030] Length = 457 Score = 52.2 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 20/53 (37%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54 NI L+ A L A N++N +T G+ + + V N + Sbjct: 1 MNLVNIALSGLNANRVALDVTAQNVANVNTPGYSRQQALMATVGDGKSNRLSS 53 >gi|294140191|ref|YP_003556169.1| flagellar hook-associated protein FlgK [Shewanella violacea DSS12] gi|293326660|dbj|BAJ01391.1| flagellar hook-associated protein FlgK, putative [Shewanella violacea DSS12] Length = 638 Score = 52.2 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 23/52 (44%), Gaps = 1/52 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M NI LA + +L+ ++N++N +T G+ + S + D Sbjct: 3 MD-LLNIARTGVLASQSQLAVTSNNIANANTQGYHRQVAEQSSLESQRFGDS 53 Score = 39.5 bits (90), Expect = 0.44, Method: Composition-based stats. Identities = 4/41 (9%), Positives = 12/41 (29%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E ++ Q + + ++ + + Sbjct: 598 SGVNLDEEAANLMRFQQAYQASARIMTTANEIFETLFNAVR 638 >gi|77359720|ref|YP_339295.1| flagellar biosynthesis; cell-proximal portion of basal-body rod [Pseudoalteromonas haloplanktis TAC125] gi|76874631|emb|CAI85852.1| flagellar biosynthesis; cell-proximal portion of basal-body rod [Pseudoalteromonas haloplanktis TAC125] Length = 143 Score = 52.2 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 21/42 (50%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N N + EM MI ++ + + + D ++ + + + Sbjct: 97 GYIYKPNVNVVEEMANMISASRSYQTNVQVADAAKQMLSKTL 138 Score = 39.5 bits (90), Expect = 0.44, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 36/96 (37%), Gaps = 7/96 (7%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKF-SEVVGAIKNDIDQK 55 F+I + A RL+T A N+SN +T+ +R + F +E+ A + + + Sbjct: 5 NVFDIAGSGMSAQNVRLNTTASNISNANTISSSQDKTYRARQPVFAAELTKASASASNPQ 64 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA 91 S V + + + + + + Sbjct: 65 GSAVGVKVLGIVESNKPLQIEYNPNHPSADENGYIY 100 >gi|320354701|ref|YP_004196040.1| hypothetical protein Despr_2613 [Desulfobulbus propionicus DSM 2032] gi|320123203|gb|ADW18749.1| protein of unknown function DUF1078 domain protein [Desulfobulbus propionicus DSM 2032] Length = 117 Score = 52.2 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 22/48 (45%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI 48 M + L+ A ++ + A N++N +T G+R +V S V Sbjct: 1 MISGIQSALSGAQAFSAKIESNAHNIANLNTEGYRKSRVVLSAGVAQS 48 Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 6/46 (13%), Positives = 19/46 (41%), Gaps = 2/46 (4%) Query: 195 KRGF--LEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 +G+ E SN + E+ ++ T + + + ++ + + Sbjct: 68 AQGYAVRELSNVDLGEEIPDLMRNTHGYAANLRTVQVSDNMLQTLL 113 >gi|269103183|ref|ZP_06155880.1| flagellar hook-associated protein FlgK [Photobacterium damselae subsp. damselae CIP 102761] gi|268163081|gb|EEZ41577.1| flagellar hook-associated protein FlgK [Photobacterium damselae subsp. damselae CIP 102761] Length = 661 Score = 52.2 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 17/121 (14%), Positives = 37/121 (30%), Gaps = 2/121 (1%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS--EVVGAIKNDIDQKISFVASG 62 IG++ +++L + N+SN +T G+ V+ + N Sbjct: 6 MQIGMSGLRTSQKQLDVASHNISNVNTPGYSRQVVEQKADDAFYNGSNYYGTGAYIDNVS 65 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 + Y + T L+ A + + + D + V + +P Sbjct: 66 RAYDQFAARELTLSTTHLEEANVRQQNMMMLDDFTSKSAVNTVNSMNDFYNSVRSLSDHP 125 Query: 123 V 123 Sbjct: 126 N 126 >gi|261885051|ref|ZP_06009090.1| hypothetical protein CfetvA_07580 [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 58 Score = 52.2 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 8/54 (14%), Positives = 25/54 (46%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54 M + G++ + + +++++SN +TVG+++ + V+ + Sbjct: 1 MMIGYYNGISGIKSGNIGIDVISNDISNINTVGYKSSTAECKSVLYPGLDHTSS 54 >gi|260899395|ref|ZP_05907790.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus AQ4037] gi|308109296|gb|EFO46836.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus AQ4037] Length = 457 Score = 52.2 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 20/53 (37%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54 NI L+ A L A N++N +T G+ + + V N + Sbjct: 1 MNLVNIALSGLNANRVALDVTAQNVANVNTPGYSRQQALMATVGDGKSNRLSS 53 >gi|261856362|ref|YP_003263645.1| flagellar basal-body rod protein FlgC [Halothiobacillus neapolitanus c2] gi|261836831|gb|ACX96598.1| flagellar basal-body rod protein FlgC [Halothiobacillus neapolitanus c2] Length = 133 Score = 52.2 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 22/43 (51%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ SN N + EM M+ ++ + + ++D + L ++ Sbjct: 88 GYVYSSNVNPVEEMVNMLSASRSYQTNVQMMDTAKNLALRTLQ 130 Score = 37.2 bits (84), Expect = 2.3, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 6/54 (11%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKN 50 + FN+ +A A RL+ A NM+N D V ++ + F +V+ Sbjct: 5 SIFNVSSSAMSAQSLRLNATASNMANADAVATKPEDAYKAREPVFQQVMEQNGG 58 >gi|170725953|ref|YP_001759979.1| flagellar basal body rod protein FlgC [Shewanella woodyi ATCC 51908] gi|169811300|gb|ACA85884.1| flagellar basal-body rod protein FlgC [Shewanella woodyi ATCC 51908] Length = 139 Score = 52.2 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 20/43 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 GF+ N N M EM MI ++ + + + + + + +R Sbjct: 94 GFIYKPNVNVMEEMADMISASRSYQMNVQVAEAAKSMLQQTLR 136 Score = 36.4 bits (82), Expect = 3.4, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 21/50 (42%), Gaps = 6/50 (12%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVG 46 FN+ + A RL+T A N++N D+V +R F + Sbjct: 6 NIFNVSGSGMSAQSVRLNTTASNIANADSVSSSIDETYRARHPIFEAEMA 55 >gi|296283218|ref|ZP_06861216.1| flagellar hook-associated protein FlgK [Citromicrobium bathyomarinum JL354] Length = 698 Score = 52.2 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 9/45 (20%), Positives = 20/45 (44%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA 47 ++ A + + +V++N++N T G+ +V S V Sbjct: 5 NILGTAVSGLSASQAGIRSVSNNIANISTPGYARERVSLSTGVTQ 49 Score = 39.1 bits (89), Expect = 0.54, Method: Composition-based stats. Identities = 6/37 (16%), Positives = 15/37 (40%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N E+ QM+ L +++ ++ + + Sbjct: 658 SGVNLDEELSQMVVLQNSYSAAARVMTTATQMYDTLL 694 >gi|260772272|ref|ZP_05881188.1| flagellar basal-body rod protein FlgC [Vibrio metschnikovii CIP 69.14] gi|260611411|gb|EEX36614.1| flagellar basal-body rod protein FlgC [Vibrio metschnikovii CIP 69.14] Length = 138 Score = 52.2 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 23/43 (53%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 GF+ N N M EM MI ++ + + + D +++ +L ++ Sbjct: 93 GFIYKPNVNVMEEMANMISASRSYQTNVQVADASKQMLLRTLQ 135 >gi|86153269|ref|ZP_01071473.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp. jejuni HB93-13] gi|121612733|ref|YP_001000227.1| flagellar basal body rod protein FlgC [Campylobacter jejuni subsp. jejuni 81-176] gi|167005182|ref|ZP_02270940.1| flagellar basal body rod protein FlgC [Campylobacter jejuni subsp. jejuni 81-176] gi|85842995|gb|EAQ60206.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp. jejuni HB93-13] gi|87250029|gb|EAQ72987.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp. jejuni 81-176] Length = 164 Score = 52.2 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 9/46 (19%), Positives = 19/46 (41%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G++ N N + EM +I T+ + + + + AI + Sbjct: 118 GYVAYPNVNPVIEMADLIEATRAYQANVSAFTSAKTIAQSAIDLLR 163 Score = 43.3 bits (100), Expect = 0.026, Method: Composition-based stats. Identities = 9/39 (23%), Positives = 18/39 (46%), Gaps = 6/39 (15%) Query: 11 AQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43 A R++ ++ N++N +T G +R +V F Sbjct: 13 GLSAQRFRMNVISSNIANANTTRTAEGGPYRRREVIFKA 51 >gi|120554030|ref|YP_958381.1| flagellar basal body rod protein FlgB [Marinobacter aquaeolei VT8] gi|120323879|gb|ABM18194.1| flagellar basal-body rod protein FlgB [Marinobacter aquaeolei VT8] Length = 132 Score = 52.2 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 15/103 (14%), Positives = 31/103 (30%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + I A A +R +A+N++N DT G++ V F ++ ++ + Sbjct: 6 DKALGIHEHALQARVKRAEVLANNLANADTPGYKARDVDFQAMMQKAQDSMTGFGMTTTH 65 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDG 104 + G+ D R+ Sbjct: 66 SGHMDTSSPGADGELLYRTPHQPSIDGNTVDAQAEQTRFMRNA 108 >gi|330445346|ref|ZP_08308998.1| flagellar basal-body rod protein FlgC [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489537|dbj|GAA03495.1| flagellar basal-body rod protein FlgC [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 138 Score = 52.2 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 10/45 (22%), Positives = 25/45 (55%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +GF+ N N M EM MI ++ + + + D +++ +++ ++ Sbjct: 91 AQGFIYKPNVNVMEEMANMISASRSYQNNVQVADASKQMLMKTLQ 135 >gi|315648139|ref|ZP_07901240.1| flagellar basal-body rod protein FlgC [Paenibacillus vortex V453] gi|315276785|gb|EFU40128.1| flagellar basal-body rod protein FlgC [Paenibacillus vortex V453] Length = 149 Score = 52.2 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 23/42 (54%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N + EM M+ T+ + + T I+ ++ +++A+ Sbjct: 104 GYVFMPNVDITKEMVDMLAATRSYEANVTAINASKAMIMKAL 145 Score = 41.8 bits (96), Expect = 0.091, Method: Composition-based stats. Identities = 19/113 (16%), Positives = 33/113 (29%), Gaps = 16/113 (14%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV------G----FRTIKVKFS------EVVG 46 SF I +A A R+ ++ N++N +T G +R V F E + Sbjct: 5 NSFGINASALTAQRLRMDVISSNIANAETTRARIENGQAVPYRRKTVVFQPQQESFEGLL 64 Query: 47 AIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 + V + + T D EG + + Sbjct: 65 RAQMSGQDAGQGVKVAAVQEDQAPLKRVYNPTHPDANTEGYVFMPNVDITKEM 117 >gi|190574257|ref|YP_001972102.1| flagellar hook-associated protein FlgK [Stenotrophomonas maltophilia K279a] gi|190012179|emb|CAQ45802.1| putative flagellar hook-associated protein [Stenotrophomonas maltophilia K279a] Length = 626 Score = 52.2 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 32/83 (38%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + G A LA ++ L+T + N++N +T G+ KV F+ Sbjct: 1 MSSVLSTGTGALLAFQRALATTSHNVANLNTPGYSRQKVNFATADPQNYGYGTVGNGTRI 60 Query: 61 SGKEYLSKEVGSFISTGTELDFA 83 + + ++ + + A Sbjct: 61 TDIRRTADQLAISRLLDSSGELA 83 Score = 42.2 bits (97), Expect = 0.062, Method: Composition-based stats. Identities = 9/39 (23%), Positives = 15/39 (38%) Query: 200 EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 E S N E M+ L Q + + + LI + + Sbjct: 583 EVSGVNLDEEAADMLRLQQAYQAASQLISTADSMFQTIL 621 >gi|170760196|ref|YP_001788056.1| flagellar hook-associated protein FlgK [Clostridium botulinum A3 str. Loch Maree] gi|169407185|gb|ACA55596.1| flagellar hook-associated protein FlgK [Clostridium botulinum A3 str. Loch Maree] Length = 621 Score = 52.2 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 11/39 (28%), Positives = 20/39 (51%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 NIG + A + L+T + N++N T G+ +V+ Sbjct: 8 LNIGKSGMFAQQGALNTTSHNIANASTEGYSRQRVELQT 46 Score = 39.5 bits (90), Expect = 0.40, Method: Composition-based stats. Identities = 4/40 (10%), Positives = 14/40 (35%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 S + E ++ + + +I ++ + I + Sbjct: 580 SGVSMDEEFANLVQFNHCYQANAKIISTVDQLLDVVINGL 619 >gi|109899396|ref|YP_662651.1| flagellar hook-associated protein FlgK [Pseudoalteromonas atlantica T6c] gi|109701677|gb|ABG41597.1| flagellar hook-associated protein FlgK [Pseudoalteromonas atlantica T6c] Length = 709 Score = 52.2 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 47/130 (36%), Gaps = 4/130 (3%) Query: 1 MQTS---FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKF-SEVVGAIKNDIDQKI 56 M + +I + A Q LST +N++N +T G+ + F +E+ G + +++ Sbjct: 1 MIRTADLLSIARSGVEASNQLLSTTGNNIANVNTEGYVRERTNFVAELTGGVGQFTTERV 60 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVS 116 + + A+ + + + + ++R T + + Sbjct: 61 MNTFAQNQLRRDTTNLAEHEAYWSKTAVLDNVFASEANSISSSMSRFFASLQTANDDPTN 120 Query: 117 ASGKYPVLDM 126 S + VL Sbjct: 121 MSARQLVLGD 130 >gi|57238273|ref|YP_178646.1| flagellar basal body rod protein FlgC [Campylobacter jejuni RM1221] gi|57167077|gb|AAW35856.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni RM1221] gi|315057945|gb|ADT72274.1| Flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp. jejuni S3] Length = 164 Score = 52.2 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 9/46 (19%), Positives = 19/46 (41%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G++ N N + EM +I T+ + + + + AI + Sbjct: 118 GYVAYPNVNPVIEMADLIEATRAYQANVSAFTSAKTIAQSAIDLLR 163 Score = 43.3 bits (100), Expect = 0.026, Method: Composition-based stats. Identities = 9/39 (23%), Positives = 18/39 (46%), Gaps = 6/39 (15%) Query: 11 AQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43 A R++ ++ N++N +T G +R +V F Sbjct: 13 GLSAQRFRMNVISSNIANANTTRTAEGGPYRRREVIFKA 51 >gi|254499106|ref|ZP_05111796.1| hypothetical protein LDG_3179 [Legionella drancourtii LLAP12] gi|254351645|gb|EET10490.1| hypothetical protein LDG_3179 [Legionella drancourtii LLAP12] Length = 408 Score = 52.2 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 24/195 (12%), Positives = 53/195 (27%), Gaps = 7/195 (3%) Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109 +D D I+ K + + F L G T + Sbjct: 210 DDKDVDITPYYDQKIEFAYSSSGAEPGKDSIQFGLNGKQVNIYFGSAHNGSTNSVQLDTV 269 Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIA--TMGLYSVDMSQ 167 + + + G+ G+ I +GL D + Sbjct: 270 EGAFSNEKRTNIEIDYNDGYGVGKQSYWSFDEEGQIAYYYDNGQTIKGIHVGLARFDDME 329 Query: 168 GFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYEMGQMIHLTQKFNS 222 + + + ++ LE SN +S E ++ L + F + Sbjct: 330 NNLIQTQDNFFRAKTNRGIHYGRPNNNGFECIRANELEASNVDSTAEFANIVVLQRMFQA 389 Query: 223 ITTLIDENEKSMLEA 237 + ++D +++ + E Sbjct: 390 CSQIMDIDKQLLEEL 404 Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 23/157 (14%), Positives = 50/157 (31%), Gaps = 5/157 (3%) Query: 33 GFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL 92 GF+ V +S + + V + G+++ + D A+ G +F + Sbjct: 5 GFKRSDVFYSSL--GNGQGEEGMGHGVRVSGMRTNYGPGNYLKGMGDSDLAIVGHGFFVV 62 Query: 93 ESPRGII-LTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQK 151 + TRDG F D + +G ++ + E G+ S+ Sbjct: 63 KLKNNEFVYTRDGHFNFEDGILIDRKTGGQVQGYDSAGN--LAPIHEKGPQTTPGKASRD 120 Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED 188 + + + +D + P+ P + Sbjct: 121 IFLKGSFVAHLIDEKKNTDPNIPDPNIPDPTPKAPTE 157 >gi|238751760|ref|ZP_04613248.1| Flagellar basal-body rod protein flgC [Yersinia rohdei ATCC 43380] gi|238710031|gb|EEQ02261.1| Flagellar basal-body rod protein flgC [Yersinia rohdei ATCC 43380] Length = 134 Score = 52.2 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 20/43 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N + EM I ++ + + +++ + ML+ + Sbjct: 89 GYVRMPNVDVTGEMVNTISASRSYQANVEVLNTTKSLMLKTLT 131 Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 22/58 (37%), Gaps = 6/58 (10%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSEVVGAIKNDID 53 F+I +A A QR++ A NM+N G +R +V F + Sbjct: 4 LNIFDIAGSALSAQSQRMNVSASNMANADSVTGPDGQPYRAKQVVFQVAAQPGQETGG 61 >gi|32266907|ref|NP_860939.1| flagellar basal body rod protein FlgC [Helicobacter hepaticus ATCC 51449] gi|32262959|gb|AAP78005.1| flagellar basal body rod protein FlgC [Helicobacter hepaticus ATCC 51449] Length = 163 Score = 52.2 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 17/43 (39%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N + EM +I T+ + + + AI Sbjct: 117 GYVAYPNVNPVVEMADLIEATRAYQANVAAFQSAKNMASNAIT 159 Score = 42.5 bits (98), Expect = 0.044, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 6/49 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44 +SF+I A R++T++ N++N +T G +R +V F Sbjct: 3 LSSFDISGYGLSAQRVRINTISSNIANANTTRTDEGGPYRRREVIFRAF 51 >gi|86146157|ref|ZP_01064483.1| flagellar basal body rod protein [Vibrio sp. MED222] gi|218708802|ref|YP_002416423.1| flagellar basal body rod protein FlgC [Vibrio splendidus LGP32] gi|85836104|gb|EAQ54236.1| flagellar basal body rod protein [Vibrio sp. MED222] gi|218321821|emb|CAV17789.1| Polar flagellar FlgC [Vibrio splendidus LGP32] Length = 137 Score = 52.2 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 23/43 (53%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N M EM MI ++ + + + D +++ +L ++ Sbjct: 92 GYIYKPNVNVMEEMANMISASRAYQTNVQVADSSKQMLLRTLQ 134 Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 27/81 (33%), Gaps = 6/81 (7%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56 FN+ +A A RL+T + N++N D+V ++ F + +N Sbjct: 5 NVFNVTGSAMSAESVRLNTTSSNLANADSVSSSAKDTYKARHAVFGAELNQARNSGHTVP 64 Query: 57 SFVASGKEYLSKEVGSFISTG 77 V E + Sbjct: 65 VKVLGIVESDKPLNAEYNPDH 85 >gi|238788313|ref|ZP_04632107.1| Flagellar basal-body rod protein flgC [Yersinia frederiksenii ATCC 33641] gi|238723559|gb|EEQ15205.1| Flagellar basal-body rod protein flgC [Yersinia frederiksenii ATCC 33641] Length = 134 Score = 52.2 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 20/43 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N + EM I ++ + + +++ + ML+ + Sbjct: 89 GYVRMPNVDVTGEMVNTISASRSYQANVEVLNTTKSLMLKTLT 131 Score = 38.7 bits (88), Expect = 0.72, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 26/68 (38%), Gaps = 6/68 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSEVVGAIKNDIDQK 55 F+I +A A QR++ A NM+N G +R +V F + + Sbjct: 4 LNIFDIAGSALSAQSQRMNVSASNMANADSVTGPDGQPYRAKQVVFQVAAQPGQETGGVR 63 Query: 56 ISFVASGK 63 ++ V Sbjct: 64 VAQVVDDP 71 >gi|260767929|ref|ZP_05876863.1| flagellar hook-associated protein FlgK [Vibrio furnissii CIP 102972] gi|260615959|gb|EEX41144.1| flagellar hook-associated protein FlgK [Vibrio furnissii CIP 102972] gi|315179632|gb|ADT86546.1| flagellar hook-associated protein [Vibrio furnissii NCTC 11218] Length = 457 Score = 52.2 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 23/53 (43%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54 NI L+ A L A N++N +T G+ + + V GA +++ Sbjct: 1 MNLVNIALSGLNANRVALDVTAQNVANINTPGYSRQQALMASVGGAKYDNLSA 53 >gi|194015045|ref|ZP_03053662.1| flagellar basal-body rod protein FlgC [Bacillus pumilus ATCC 7061] gi|194014071|gb|EDW23636.1| flagellar basal-body rod protein FlgC [Bacillus pumilus ATCC 7061] Length = 150 Score = 52.2 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 25/42 (59%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G+++ N + + EM +I ++ + + T ++ N+ +++A+ Sbjct: 105 GYVQTPNVDPLKEMVDLISSSRSYEANVTALNANKSMLMKAL 146 Score = 42.5 bits (98), Expect = 0.055, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 37/114 (32%), Gaps = 17/114 (14%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV------G----FRTIKV-------KFSEVV 45 + N +A A R+ V+ N++N DT G +R V FS ++ Sbjct: 5 SGVNASASALTAQRLRMDVVSSNLANMDTTRAKQVDGNWEPYRRKLVTLQPSGESFSSIL 64 Query: 46 GAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 + N + + V + K + + T D G P + Sbjct: 65 NSNMNSSGKLGNGVKATKITEDETPFNLQYDPTNPDANENGYVQTPNVDPLKEM 118 >gi|332533177|ref|ZP_08409046.1| flagellar basal-body rod protein FlgC [Pseudoalteromonas haloplanktis ANT/505] gi|332037459|gb|EGI73913.1| flagellar basal-body rod protein FlgC [Pseudoalteromonas haloplanktis ANT/505] Length = 143 Score = 52.2 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 21/42 (50%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N N + EM MI ++ + + + D ++ + + + Sbjct: 97 GYIYKPNVNVVEEMANMISASRSYQTNVQVADAAKQMLSKTL 138 Score = 39.1 bits (89), Expect = 0.51, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 37/96 (38%), Gaps = 7/96 (7%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKF-SEVVGAIKNDIDQK 55 F+I + A RL+T A N+SN +T+ +R + F +E+ A + +Q+ Sbjct: 5 NVFDIAGSGMSAQNVRLNTTASNISNANTISSSQDKTYRARQPVFAAELTKASASVSNQQ 64 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA 91 S V + + + + + + Sbjct: 65 GSAVGVKVLGIVESDAPLQIEYNPNHPSADENGYIY 100 >gi|317492430|ref|ZP_07950859.1| flagellar basal-body rod protein FlgC [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919769|gb|EFV41099.1| flagellar basal-body rod protein FlgC [Enterobacteriaceae bacterium 9_2_54FAA] Length = 134 Score = 52.2 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 6/43 (13%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N + + EM I ++ + + +++ + M++ + Sbjct: 89 GYVRMPNVDVVGEMVNSIAASRSYQANVEVLNTTKSLMMKTLT 131 Score = 40.6 bits (93), Expect = 0.18, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 6/48 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42 M F+I +A A QR++ A NM+N G +R +V F Sbjct: 3 MLNIFDISGSALAAQSQRMNVAASNMANADSVTGPDGEPYRAKQVVFE 50 >gi|253573515|ref|ZP_04850858.1| flagellar basal-body rod protein FlgB [Paenibacillus sp. oral taxon 786 str. D14] gi|251847043|gb|EES75048.1| flagellar basal-body rod protein FlgB [Paenibacillus sp. oral taxon 786 str. D14] Length = 135 Score = 52.2 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 25/67 (37%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69 A A R +A+N++N DT F+ V F ++ A N + + + Sbjct: 14 TAIQAANLRQGVIANNIANVDTPYFKRSSVSFESMLQAEMNGNMPALQGRRTDVRHFVIG 73 Query: 70 VGSFIST 76 + + Sbjct: 74 PTTEVPE 80 >gi|16760051|ref|NP_455668.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16764531|ref|NP_460146.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29142178|ref|NP_805520.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56413838|ref|YP_150913.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62179692|ref|YP_216109.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161614602|ref|YP_001588567.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167553037|ref|ZP_02346787.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167994039|ref|ZP_02575131.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168234101|ref|ZP_02659159.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168237257|ref|ZP_02662315.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168244774|ref|ZP_02669706.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168264032|ref|ZP_02686005.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168467127|ref|ZP_02700969.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168822618|ref|ZP_02834618.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194446237|ref|YP_002040429.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194448226|ref|YP_002045174.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194469652|ref|ZP_03075636.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194737972|ref|YP_002114174.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197250491|ref|YP_002146868.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197264065|ref|ZP_03164139.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197362761|ref|YP_002142398.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198244048|ref|YP_002215962.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200389763|ref|ZP_03216374.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204930701|ref|ZP_03221574.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205353087|ref|YP_002226888.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207857317|ref|YP_002243968.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213161846|ref|ZP_03347556.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213419883|ref|ZP_03352949.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213424678|ref|ZP_03357443.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213582035|ref|ZP_03363861.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213615928|ref|ZP_03371754.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213648924|ref|ZP_03378977.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213865507|ref|ZP_03387626.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|224584321|ref|YP_002638119.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238911005|ref|ZP_04654842.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289828582|ref|ZP_06546407.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|60392283|sp|P0A1I7|FLGC_SALTY RecName: Full=Flagellar basal-body rod protein flgC; AltName: Full=Putative proximal rod protein gi|60392284|sp|P0A1I8|FLGC_SALTI RecName: Full=Flagellar basal-body rod protein flgC; AltName: Full=Putative proximal rod protein gi|25298909|pir||AH0639 probable flagellar basal-body rod protein FlgC (proximal rod protein) STY1214 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16419692|gb|AAL20105.1| flagellar biosynthesis protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16502345|emb|CAD08299.1| putative flagellar basal-body rod protein FlgC (proximal rod protein) [Salmonella enterica subsp. enterica serovar Typhi] gi|29137808|gb|AAO69369.1| putative flagellar basal-body rod protein FlgC [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56128095|gb|AAV77601.1| putative flagellar basal-body rod protein FlgC (proximal rod protein) [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62127325|gb|AAX65028.1| flagellar biosynthesis, cell-proximal portion of basal-body rod [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161363966|gb|ABX67734.1| hypothetical protein SPAB_02352 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194404900|gb|ACF65122.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194406530|gb|ACF66749.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194456016|gb|EDX44855.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194713474|gb|ACF92695.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195630453|gb|EDX49079.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197094238|emb|CAR59743.1| putative flagellar basal-body rod protein FlgC (proximal rod protein) [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197214194|gb|ACH51591.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197242320|gb|EDY24940.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197289825|gb|EDY29186.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197938564|gb|ACH75897.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199602208|gb|EDZ00754.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204320160|gb|EDZ05364.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205272868|emb|CAR37797.1| putative flagellar basal-body rod protein FlgC (proximal rod protein) [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205322443|gb|EDZ10282.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205328049|gb|EDZ14813.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205331940|gb|EDZ18704.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205336413|gb|EDZ23177.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205341032|gb|EDZ27796.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205347372|gb|EDZ34003.1| flagellar basal-body rod protein FlgC [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206709120|emb|CAR33453.1| putative flagellar basal-body rod protein FlgC (proximal rod protein) [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224468848|gb|ACN46678.1| flagellar basal body rod protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261246386|emb|CBG24195.1| putative flagellar basal-body rod protein FlgC (proximal rod protein) [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267992949|gb|ACY87834.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157716|emb|CBW17208.1| putative flagellar basal-body rod protein FlgC (proximal rod protein) [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312912162|dbj|BAJ36136.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320086385|emb|CBY96158.1| Flagellar basal-body rod protein flgC [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321223793|gb|EFX48856.1| Flagellar basal-body rod protein FlgC [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322616545|gb|EFY13454.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322620514|gb|EFY17378.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622508|gb|EFY19353.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629659|gb|EFY26434.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322632621|gb|EFY29367.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636884|gb|EFY33587.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641578|gb|EFY38216.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644068|gb|EFY40614.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322653957|gb|EFY50280.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658489|gb|EFY54751.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322663347|gb|EFY59549.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322670081|gb|EFY66221.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674855|gb|EFY70946.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676675|gb|EFY72742.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682597|gb|EFY78616.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686650|gb|EFY82629.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322714162|gb|EFZ05733.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323129445|gb|ADX16875.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323195764|gb|EFZ80940.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198344|gb|EFZ83448.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323203172|gb|EFZ88202.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323209175|gb|EFZ94112.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323209679|gb|EFZ94608.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217865|gb|EGA02580.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323222153|gb|EGA06537.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323224925|gb|EGA09183.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229667|gb|EGA13790.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323232892|gb|EGA16988.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240627|gb|EGA24669.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323242941|gb|EGA26962.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323250258|gb|EGA34147.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323252633|gb|EGA36471.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323258839|gb|EGA42492.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323261028|gb|EGA44621.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266937|gb|EGA50422.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323269978|gb|EGA53427.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326623710|gb|EGE30055.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326628167|gb|EGE34510.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] gi|332988066|gb|AEF07049.1| flagellar basal body rod protein FlgC [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 134 Score = 52.2 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 6/43 (13%), Positives = 22/43 (51%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G+++ N + + EM + ++ + + +++ + ML+ + Sbjct: 89 GYVKMPNVDVVGEMVNTMSASRSYQANIEVLNTVKSMMLKTLT 131 Score = 38.3 bits (87), Expect = 0.92, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 6/47 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42 F+I +A A +RL+ A N++N G +R +V F Sbjct: 4 LNIFDIAGSALAAQSKRLNVAASNLANADSVTGPDGQPYRAKQVVFQ 50 >gi|312622116|ref|YP_004023729.1| flagellar hook-associated protein flgk [Caldicellulosiruptor kronotskyensis 2002] gi|312202583|gb|ADQ45910.1| flagellar hook-associated protein FlgK [Caldicellulosiruptor kronotskyensis 2002] Length = 525 Score = 52.2 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 19/192 (9%), Positives = 54/192 (28%), Gaps = 11/192 (5%) Query: 51 DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTD 110 I ++ + + L ++ + G L+ +F + R + Sbjct: 341 GIPYYLNRLNEFAQKLIEKFNELHTQGWSLNGQNTNINFFEPPVGQTFFYARYIKVSDAV 400 Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170 L + + Y + + ++ N + + + ++ SQG Sbjct: 401 MNDLNNIATTYDASSLPGGNDLVVDMLKLRNDNSVFKEGKFEDFLKSLISNLGVDSQG-- 458 Query: 171 RRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + N + + G + EM +I F + +I+ Sbjct: 459 ---AKNFAENQKVMVTQLDNRRQAVSG------VSIDEEMTNLIRYQHGFQASARMINAF 509 Query: 231 EKSMLEAIRNIA 242 ++ + + + Sbjct: 510 DEMLDVIVNRLG 521 Score = 42.5 bits (98), Expect = 0.047, Method: Composition-based stats. Identities = 11/77 (14%), Positives = 21/77 (27%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 I + L + N++N T G+ + + K V G Sbjct: 5 GLEIARTGIFVNRKGLEVTSHNVANASTPGYTRQVLNVKSNPPSAKVGFYSPKFQVGMGA 64 Query: 64 EYLSKEVGSFISTGTEL 80 + S E + + Sbjct: 65 DVQSLEQIRDMFLDIQY 81 >gi|254785369|ref|YP_003072798.1| flagellar basal body rod protein FlgC [Teredinibacter turnerae T7901] gi|237685992|gb|ACR13256.1| flagellar basal-body rod protein FlgC [Teredinibacter turnerae T7901] Length = 145 Score = 52.2 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 20/43 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N + EM MI ++ F +++ ++ + + Sbjct: 100 GYVYYPNVNVVEEMTNMISASRSFQVNVEVMNSAKQMVQRVLT 142 >gi|160939631|ref|ZP_02086979.1| hypothetical protein CLOBOL_04523 [Clostridium bolteae ATCC BAA-613] gi|158437422|gb|EDP15186.1| hypothetical protein CLOBOL_04523 [Clostridium bolteae ATCC BAA-613] Length = 144 Score = 52.2 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 22/42 (52%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N NS EM ++ ++ + + T ++ + L+A+ Sbjct: 99 GYVMMPNVNSAEEMVDLMAASRAYEANVTALNVAKSMALKAL 140 Score = 39.5 bits (90), Expect = 0.38, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 6/46 (13%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43 S NI +A A R + N++N +T G ++ +V F E Sbjct: 6 SLNITGSALTAERFRTDIIMQNLANQNTTRTAEGGPYKRKQVVFRE 51 >gi|291562058|emb|CBL40874.1| flagellar hook-associated protein FlgK [butyrate-producing bacterium SS3/4] Length = 557 Score = 52.2 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 31/85 (36%), Gaps = 2/85 (2%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 + FN L+A A ++RL N+SN +T G+ +++ S + N + + + Sbjct: 7 SGFNTALSALQANQKRLDITGQNLSNMNTAGYTRQQLEASSLNYT--NPVSHYSNGNETA 64 Query: 63 KEYLSKEVGSFISTGTELDFALEGD 87 + LD Sbjct: 65 VGFGVSMDRVSQIRDPYLDIQYRSQ 89 Score = 36.4 bits (82), Expect = 3.5, Method: Composition-based stats. Identities = 18/137 (13%), Positives = 36/137 (26%) Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 D + ++A S I I I+ G D Sbjct: 421 STDDSTTGITAGNIGISKGWTSGTIHISTDGTNRTDTILDMIAAMKDTKKLNGKTFADYM 480 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 + S S N +++ S + E M+ +N+ + L Sbjct: 481 NNLSTQLASDSSSNQTALKTGTTVLNSIQDSRDSLSGVSLDEEATNMMAYVSAYNAASRL 540 Query: 227 IDENEKSMLEAIRNIAS 243 + ++ + I N + Sbjct: 541 MTALDEVLNTLISNTGA 557 >gi|152980444|ref|YP_001353109.1| FlgC flagellar basal body rod protein [Janthinobacterium sp. Marseille] gi|151280521|gb|ABR88931.1| FlgC flagellar basal body rod protein [Janthinobacterium sp. Marseille] Length = 135 Score = 52.2 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 20/43 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G + N N + EM MI ++ + + ++ + +L+ + Sbjct: 90 GHVAMPNVNVVEEMVNMISASRSYQTNVETMNTAKTMLLKTLT 132 Score = 41.0 bits (94), Expect = 0.15, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 31/102 (30%), Gaps = 8/102 (7%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSE--VVGAIKNDIDQ 54 FN+ +A A QRL+ V+ N++N T +R +V+F + G + + Sbjct: 5 NIFNVSGSAMSAQSQRLNVVSSNIANAESTTSADGKTYRAKQVEFQAQQMKGGATSTGVR 64 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPR 96 V + A+ Sbjct: 65 VNRVVEDTSPLKMVFDPKHPNADETGHVAMPNVNVVEEMVNM 106 >gi|28211376|ref|NP_782320.1| flagellar hook-associated protein 1 [Clostridium tetani E88] gi|28203817|gb|AAO36257.1| flagellar hook-associated protein 1 [Clostridium tetani E88] Length = 579 Score = 52.2 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 7/39 (17%), Positives = 19/39 (48%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 ++G + A ++ + + NM+N +T G+ + + Sbjct: 8 LHVGKSGIFANQKAIDVTSHNMANANTEGYSRQRAELQT 46 Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats. Identities = 5/41 (12%), Positives = 14/41 (34%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 S + E +I + + +I ++ + I + Sbjct: 537 ASGVSIDEETTNLIQFQHAYQANAKIISTVDELLDVVINGL 577 >gi|258625228|ref|ZP_05720140.1| putative flagellar hook-associated protein 1 [Vibrio mimicus VM603] gi|258582475|gb|EEW07312.1| putative flagellar hook-associated protein 1 [Vibrio mimicus VM603] Length = 457 Score = 52.2 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 18/43 (41%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44 NI L+ A L A N++N +T GF + + V Sbjct: 1 MNIVNIALSGLNANRVALDVTAQNVANINTPGFSRQQAIMTSV 43 Score = 36.0 bits (81), Expect = 4.6, Method: Composition-based stats. Identities = 11/92 (11%), Positives = 30/92 (32%), Gaps = 5/92 (5%) Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLED----SNANSM 207 K +A G ++ ++ F + + ++ + +E S NS Sbjct: 365 NKPVAITGFGNISINDAFTSMVGETAIKARQAD-SDYQTRASMNQQAIESRNNVSAVNSD 423 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E ++ +N+ +I + ++ Sbjct: 424 EEAANLMTFANAYNANMKVISTANQLFDSVLQ 455 >gi|331269279|ref|YP_004395771.1| flagellar hook-associated protein 1 [Clostridium botulinum BKT015925] gi|329125829|gb|AEB75774.1| flagellar hook-associated protein 1 [Clostridium botulinum BKT015925] Length = 647 Score = 52.2 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 12/90 (13%), Positives = 32/90 (35%), Gaps = 4/90 (4%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV----VGAIKNDIDQKISF 58 ++ N+G A + L + N++N++T G+ + + A+ N + Sbjct: 6 STLNVGKRGLYAQQGALDVTSHNIANSNTEGYTRQRALMETTRPFGMPAMDNQVGPGQIG 65 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDA 88 + + +F+ + + G Sbjct: 66 TGVEISKIQRVRDTFMDYQVRRETSTLGQY 95 Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 5/40 (12%), Positives = 15/40 (37%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 S + EM ++ + + +I ++ + I + Sbjct: 606 SGVSLNEEMANIVQYQHAYQANAKIIATTDQLLDVVINGL 645 >gi|268589984|ref|ZP_06124205.1| flagellar basal-body rod protein FlgC [Providencia rettgeri DSM 1131] gi|291314702|gb|EFE55155.1| flagellar basal-body rod protein FlgC [Providencia rettgeri DSM 1131] Length = 134 Score = 52.2 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 7/61 (11%), Positives = 26/61 (42%) Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 P P + ++G+++ N + + EM I ++ + + +++ + + + + Sbjct: 71 PTPPRMEYKPGHPSADEKGYVQMPNVDMVGEMINTISASRSYQANLEVMNTAKTLLQKTL 130 Query: 239 R 239 Sbjct: 131 T 131 Score = 37.5 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 20/121 (16%), Positives = 41/121 (33%), Gaps = 6/121 (4%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQK 55 + F+I +A A QRL+ A NM+N +++ +R +V F + Sbjct: 4 LSIFDISASALTAQSQRLNVSASNMANAESIAGPDGQPYRAKQVVFQMAPQGRHEVGGVR 63 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115 +S + E + E + + E I +R + + + Sbjct: 64 VSELIEDPTPPRMEYKPGHPSADEKGYVQMPNVDMVGEMINTISASRSYQANLEVMNTAK 123 Query: 116 S 116 + Sbjct: 124 T 124 >gi|258622494|ref|ZP_05717516.1| putative flagellar hook-associated protein 1 [Vibrio mimicus VM573] gi|258585194|gb|EEW09921.1| putative flagellar hook-associated protein 1 [Vibrio mimicus VM573] Length = 457 Score = 52.2 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 18/43 (41%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44 NI L+ A L A N++N +T GF + + V Sbjct: 1 MNIVNIALSGLNANRVALDVTAQNVANINTPGFSRQQAIMTSV 43 Score = 36.4 bits (82), Expect = 3.3, Method: Composition-based stats. Identities = 7/57 (12%), Positives = 22/57 (38%), Gaps = 4/57 (7%) Query: 187 EDLSGVTVKRGFLED----SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + + ++ + +E S NS E ++ + +N+ +I + ++ Sbjct: 399 DYQTRASMNQQAIESRDNVSAVNSDEEAANLMTFSNAYNANMKVISTANQLFDSVLQ 455 >gi|238764390|ref|ZP_04625340.1| Flagellar basal-body rod protein flgC [Yersinia kristensenii ATCC 33638] gi|238697416|gb|EEP90183.1| Flagellar basal-body rod protein flgC [Yersinia kristensenii ATCC 33638] Length = 134 Score = 52.2 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 20/43 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N + EM I ++ + + +++ + ML+ + Sbjct: 89 GYVRMPNVDITGEMVNTISASRSYQANVEVLNTTKSLMLKTLT 131 Score = 38.7 bits (88), Expect = 0.72, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 26/68 (38%), Gaps = 6/68 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSEVVGAIKNDIDQK 55 F+I +A A QR++ A NM+N G +R +V F + + Sbjct: 4 LNIFDIAGSALSAQSQRMNVSASNMANADSVTGPDGQPYRAKQVVFQVAAQPGQETGGVR 63 Query: 56 ISFVASGK 63 ++ V Sbjct: 64 VAQVIDDP 71 >gi|284989567|ref|YP_003408121.1| flagellar hook-associated protein FlgK [Geodermatophilus obscurus DSM 43160] gi|284062812|gb|ADB73750.1| flagellar hook-associated protein FlgK [Geodermatophilus obscurus DSM 43160] Length = 482 Score = 52.2 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 N A A ++ L N++N +T G+ +V+ + G I S V Sbjct: 7 GLNTARTALWASQRGLDVTGQNIANVNTDGYSRQRVELRAMGGTAVPAIHSVSSPVG 63 Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 6/41 (14%), Positives = 16/41 (39%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N EM M+ +++ ++ ++++ I Sbjct: 438 SGVNLDEEMTNMLSFQHAYSAAARMVTAIDEALDTLINRTG 478 >gi|317492422|ref|ZP_07950851.1| flagellar hook-associated protein FlgK [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919761|gb|EFV41091.1| flagellar hook-associated protein FlgK [Enterobacteriaceae bacterium 9_2_54FAA] Length = 561 Score = 52.2 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 29/83 (34%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M N ++ A + LS ++N+SN T G+ V F++ G + Sbjct: 1 MANLINSAMSGLSAAQTALSVTSNNLSNVYTQGYNRQTVSFAQSGGISTSTGFIGNGVNV 60 Query: 61 SGKEYLSKEVGSFISTGTELDFA 83 SG + D+A Sbjct: 61 SGINREYNSFIVGQLRQGQSDYA 83 Score = 35.2 bits (79), Expect = 8.7, Method: Composition-based stats. Identities = 8/73 (10%), Positives = 20/73 (27%) Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 G V + + + + + + S N E G ++ Q + + + Sbjct: 487 AGLVGTVGNQTNSAKVDSTAQGNVVKQLTQQQQSVSGVNLDEEYGNLMRFQQYYQANAQV 546 Query: 227 IDENEKSMLEAIR 239 I + Sbjct: 547 IQTATTLFSALLN 559 >gi|313901523|ref|ZP_07834970.1| flagellar basal-body rod protein FlgC [Thermaerobacter subterraneus DSM 13965] gi|313468218|gb|EFR63685.1| flagellar basal-body rod protein FlgC [Thermaerobacter subterraneus DSM 13965] Length = 188 Score = 52.2 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 6/49 (12%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43 M ++F+I + A RL +A N++N D+ G +R + F E Sbjct: 5 MFSTFDIAASGMTAQRLRLDLIASNLANVDSTRTPQGGPYRRLVPVFEE 53 Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 5/30 (16%), Positives = 15/30 (50%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 G++ N + + EM ++ T+ + + + Sbjct: 142 GYVAYPNVDPLAEMVNLLAATRAYEANVAV 171 >gi|319790422|ref|YP_004152055.1| flagellar basal-body rod protein FlgC [Thermovibrio ammonificans HB-1] gi|317114924|gb|ADU97414.1| flagellar basal-body rod protein FlgC [Thermovibrio ammonificans HB-1] Length = 135 Score = 52.2 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 8/47 (17%), Positives = 21/47 (44%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G++ N + + EM MI + + + T + + ++ I + + Sbjct: 89 GYVTLPNVDPLREMVDMISAMRSYEANLTAFNTRKNMIVNTIDILKA 135 Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 13/82 (15%), Positives = 27/82 (32%), Gaps = 6/82 (7%) Query: 1 MQ-TSFNIGLAAQLALEQRLSTVADNMSNTDTV---G--FRTIKVKFSEVVGAIKNDIDQ 54 M + + LA R+ A N++N ++V G +R F V+ + Sbjct: 1 MIFKGLEVSVTGMLAQRVRMDVAASNLANANSVDDNGQPYRRRVPIFEAVLDEVNGVKTY 60 Query: 55 KISFVASGKEYLSKEVGSFIST 76 ++ ++ S Sbjct: 61 RVKVKKIVEDPSPFRKIYDPSN 82 >gi|163803175|ref|ZP_02197058.1| putative flagellar hook-associated protein [Vibrio sp. AND4] gi|159173075|gb|EDP57908.1| putative flagellar hook-associated protein [Vibrio sp. AND4] Length = 457 Score = 52.2 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 17/99 (17%), Positives = 28/99 (28%), Gaps = 1/99 (1%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 NI L+ A L A N++N +T G+ + + VG K + V Sbjct: 1 MNLVNIALSGLNANRVALDVTAQNVANINTPGYSRQQALMAS-VGDGKYNKLSPGMGVEV 59 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL 100 + T + A + L Sbjct: 60 TSIRRVTDQFLVKQTWSTNSLAAYSAGYVTAMDQLENTL 98 >gi|52841457|ref|YP_095256.1| flagellar hook-associated protein FlgK [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52628568|gb|AAU27309.1| flagellar hook associated protein 1 FlgK [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 649 Score = 52.2 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 18/132 (13%), Positives = 49/132 (37%), Gaps = 1/132 (0%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + NI + A ++ L +N++N T G+ ++F+ + + + + V+ Sbjct: 1 MSILNIAYSGLNAFQRALDVTGNNIANFKTRGYSRQSIQFTPI-TSNRYAGSYIGAGVSV 59 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 Y + + + + L + + DA++ +L++DG + + G+ Sbjct: 60 ASIYRNVDQFANAQVRSTLSYRTQYDAFYNQAIQIDKLLSQDGSSISVPLQTFFDSIGQL 119 Query: 122 PVLDMASVPIQI 133 + Sbjct: 120 NSTPDNIATRGV 131 >gi|289548424|ref|YP_003473412.1| flagellar basal-body rod protein FlgC [Thermocrinis albus DSM 14484] gi|289182041|gb|ADC89285.1| flagellar basal-body rod protein FlgC [Thermocrinis albus DSM 14484] Length = 137 Score = 52.2 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 7/42 (16%), Positives = 18/42 (42%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 GF+ N + EM M+ + + + T + ++ + + Sbjct: 92 GFVRLPNVDVTAEMVDMLSALRSYEANLTAFNATKEIVQRTL 133 Score = 38.3 bits (87), Expect = 0.99, Method: Composition-based stats. Identities = 5/22 (22%), Positives = 12/22 (54%) Query: 7 IGLAAQLALEQRLSTVADNMSN 28 + + A R++ +A N++N Sbjct: 10 VSASGMYAQRVRINVIASNLAN 31 >gi|167628881|ref|YP_001679380.1| flagellar hook-associated protein flgk, putative [Heliobacterium modesticaldum Ice1] gi|167591621|gb|ABZ83369.1| flagellar hook-associated protein flgk, putative [Heliobacterium modesticaldum Ice1] Length = 736 Score = 52.2 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 8/41 (19%), Positives = 19/41 (46%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S+ + EM MI Q +N+ +++ ++ + I + Sbjct: 692 SSVSLDEEMTNMIRYQQAYNASARMVNVMDEMLDTIIHRLG 732 Score = 39.5 bits (90), Expect = 0.38, Method: Composition-based stats. Identities = 7/37 (18%), Positives = 12/37 (32%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 I A L N++N +T G+ + Sbjct: 7 GLEIAKRGINANRIGLDVTGHNITNVNTEGYSRQTIV 43 >gi|167623359|ref|YP_001673653.1| flagellar basal body rod protein FlgC [Shewanella halifaxensis HAW-EB4] gi|167353381|gb|ABZ75994.1| flagellar basal-body rod protein FlgC [Shewanella halifaxensis HAW-EB4] Length = 138 Score = 52.2 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 20/43 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 GF+ N N M EM MI ++ + + + + + + +R Sbjct: 93 GFIYKPNVNVMEEMANMISASRSYQMNVQVTEAAKSMLQQTLR 135 Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 27/84 (32%), Gaps = 6/84 (7%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56 FN+ + A RL+T A N++N D+V +R F + + Sbjct: 5 NIFNVAGSGMSAQSVRLNTTASNIANADSVSSSVGETYRARHPIFEAEMSKAQQHQSASA 64 Query: 57 SFVASGKEYLSKEVGSFISTGTEL 80 S G + S + Sbjct: 65 SVAVKGIVESDLPLNKEFSPDHPM 88 >gi|194365674|ref|YP_002028284.1| flagellar hook-associated protein FlgK [Stenotrophomonas maltophilia R551-3] gi|194348478|gb|ACF51601.1| flagellar hook-associated protein FlgK [Stenotrophomonas maltophilia R551-3] Length = 626 Score = 52.2 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 32/83 (38%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + G A LA ++ L+T + N++N +T G+ KV F+ Sbjct: 1 MSSVLSTGTGALLAFQRALATTSHNVANLNTPGYSRQKVNFATADPQNYGYGTVGNGTRI 60 Query: 61 SGKEYLSKEVGSFISTGTELDFA 83 + + ++ + + A Sbjct: 61 TDIRRTADQLAISRLLDSSGELA 83 Score = 42.2 bits (97), Expect = 0.070, Method: Composition-based stats. Identities = 9/39 (23%), Positives = 15/39 (38%) Query: 200 EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 E S N E M+ L Q + + + LI + + Sbjct: 583 EVSGVNLDEEAADMLRLQQAYQAASQLISTADSMFQTIL 621 >gi|312127297|ref|YP_003992171.1| flagellar hook-associated protein flgk [Caldicellulosiruptor hydrothermalis 108] gi|311777316|gb|ADQ06802.1| flagellar hook-associated protein FlgK [Caldicellulosiruptor hydrothermalis 108] Length = 525 Score = 52.2 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 6/41 (14%), Positives = 16/41 (39%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S + EM +I F + +I+ ++ + + + Sbjct: 481 SGVSIDEEMTNLIKYQHGFQASARMINAFDEMLDVLVNRLG 521 Score = 42.5 bits (98), Expect = 0.046, Method: Composition-based stats. Identities = 11/77 (14%), Positives = 21/77 (27%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 I + L + N++N T G+ + + K V G Sbjct: 5 GLEIARTGIFVNRKGLEVTSHNVANASTPGYTRQVLNVKSNPPSAKVGFYSPKFQVGMGA 64 Query: 64 EYLSKEVGSFISTGTEL 80 + S E + + Sbjct: 65 DVQSLEQIRDMFLDIQY 81 >gi|207108270|ref|ZP_03242432.1| flagellar basal-body rod protein FlgG [Helicobacter pylori HPKX_438_CA4C1] Length = 49 Score = 52.2 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 198 FLEDSNANSMYEMGQMIHLTQKFNSITTLIDE-NEKSMLEAIRNIAS 243 LE SN N++ EM +I + + + + ++ + EAI +A+ Sbjct: 1 MLEKSNVNAVREMSALIEINRFLDMYSKVLKTHQDDMNAEAINKLAT 47 >gi|91225871|ref|ZP_01260840.1| flagellar basal-body rod protein C [Vibrio alginolyticus 12G01] gi|91189521|gb|EAS75797.1| flagellar basal-body rod protein C [Vibrio alginolyticus 12G01] Length = 137 Score = 52.2 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 23/43 (53%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N M EM MI ++ + + + D +++ +L ++ Sbjct: 92 GYIYKPNVNVMEEMANMISASRAYQTNVQVADSSKQMLLRTLQ 134 Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 26/81 (32%), Gaps = 6/81 (7%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56 FN+ +A A RL+T + N++N D+V ++ F + D Sbjct: 5 NVFNVTGSAMSAESVRLNTTSSNLANADSVSSSAKDTYKARHAVFGAELSNAMRGGDTVP 64 Query: 57 SFVASGKEYLSKEVGSFISTG 77 V E + Sbjct: 65 VKVMGIVESDKPLNAEYNPDH 85 >gi|317121813|ref|YP_004101816.1| flagellar basal-body rod protein FlgC [Thermaerobacter marianensis DSM 12885] gi|315591793|gb|ADU51089.1| flagellar basal-body rod protein FlgC [Thermaerobacter marianensis DSM 12885] Length = 179 Score = 52.2 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 27/67 (40%), Gaps = 6/67 (8%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDIDQKI 56 +F+I + A RL +A N++N DT G +R + F E V + ++ Sbjct: 7 NTFDIAASGMTAQRLRLDLIASNLANVDTTRTAQGGPYRRLVPVFQERVRPFAEVLRERA 66 Query: 57 SFVASGK 63 + Sbjct: 67 AGFGGMS 73 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 8/46 (17%), Positives = 19/46 (41%), Gaps = 1/46 (2%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G++ N + + EM ++ T+ + + + L A+ I Sbjct: 133 GYVAYPNVDPLMEMVNLLAATRAYEANVAVFSAARTLALRAL-EIG 177 >gi|302343763|ref|YP_003808292.1| flagellar hook-associated protein FlgK [Desulfarculus baarsii DSM 2075] gi|301640376|gb|ADK85698.1| flagellar hook-associated protein FlgK [Desulfarculus baarsii DSM 2075] Length = 574 Score = 52.2 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 7/38 (18%), Positives = 16/38 (42%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S + EM +MI + + +I +++ + I Sbjct: 533 MSGVSLDEEMVRMIQFQRSYQMAAQMIQVSDELLQTLI 570 Score = 44.1 bits (102), Expect = 0.018, Method: Composition-based stats. Identities = 11/83 (13%), Positives = 25/83 (30%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 + +I A A +L V+ N++N +T G+ + + + Sbjct: 6 SMMDISRWALNASVDQLDVVSHNVANVNTPGYSRQVAVLATRNPQYSSKGYFGNGVQTTT 65 Query: 63 KEYLSKEVGSFISTGTELDFALE 85 ++ T D + Sbjct: 66 VMQYVDKLLLGRLTANTSDTSYY 88 >gi|224437870|ref|ZP_03658817.1| flagellar basal body rod protein FlgC [Helicobacter cinaedi CCUG 18818] gi|313144319|ref|ZP_07806512.1| flagellar basal body rod protein FlgC [Helicobacter cinaedi CCUG 18818] gi|313129350|gb|EFR46967.1| flagellar basal body rod protein FlgC [Helicobacter cinaedi CCUG 18818] Length = 163 Score = 52.2 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 17/43 (39%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N + EM +I T+ + + + AI Sbjct: 117 GYVAYPNVNPVVEMADLIEATRAYQANVAAFQSAKNMASNAIT 159 Score = 42.5 bits (98), Expect = 0.047, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 6/49 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44 +SF+I A R++T++ N++N +T G +R +V F Sbjct: 3 LSSFDISGYGLSAQRVRVNTISSNIANANTTRTDEGGPYRRREVVFRAF 51 >gi|212634346|ref|YP_002310871.1| flagellar basal body rod protein FlgC [Shewanella piezotolerans WP3] gi|212555830|gb|ACJ28284.1| Flagellar basal-body rod protein FlgC [Shewanella piezotolerans WP3] Length = 138 Score = 52.2 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 20/43 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 GF+ N N M EM MI ++ + + D + + + +R Sbjct: 93 GFIYKPNVNVMEEMANMISASRSYQMNVQVTDAAKSMLQQTLR 135 Score = 36.4 bits (82), Expect = 3.2, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 27/84 (32%), Gaps = 6/84 (7%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56 FN+ + A RL+T A N++N D V +R F + + Sbjct: 5 NIFNVAGSGMSAQSVRLNTTASNIANADAVSSSAGETYRARHPIFEAEMSKAQQHQSASQ 64 Query: 57 SFVASGKEYLSKEVGSFISTGTEL 80 S G + S G + Sbjct: 65 SVAVKGIVESDLPLNKEFSPGHPM 88 >gi|153951079|ref|YP_001398445.1| flagellar basal body rod protein FlgC [Campylobacter jejuni subsp. doylei 269.97] gi|152938525|gb|ABS43266.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp. doylei 269.97] Length = 164 Score = 52.2 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 9/46 (19%), Positives = 19/46 (41%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G++ N N + EM +I T+ + + + + AI + Sbjct: 118 GYVAYPNVNPVIEMADLIEATRAYQANVSAFTSAKTIAQSAIDLLR 163 Score = 42.9 bits (99), Expect = 0.036, Method: Composition-based stats. Identities = 10/39 (25%), Positives = 18/39 (46%), Gaps = 6/39 (15%) Query: 11 AQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43 A R+S ++ N++N +T G +R +V F Sbjct: 13 GLSAQRFRMSVISSNIANVNTTRTAEGGPYRRREVIFKA 51 >gi|153834459|ref|ZP_01987126.1| flagellar basal-body rod protein FlgC [Vibrio harveyi HY01] gi|163802605|ref|ZP_02196497.1| flagellar basal-body rod protein C [Vibrio sp. AND4] gi|148869155|gb|EDL68187.1| flagellar basal-body rod protein FlgC [Vibrio harveyi HY01] gi|159173688|gb|EDP58507.1| flagellar basal-body rod protein C [Vibrio sp. AND4] Length = 137 Score = 52.2 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 23/43 (53%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N M EM MI ++ + + + D +++ +L ++ Sbjct: 92 GYIYKPNVNVMEEMANMISASRAYQTNVQVADSSKQMLLRTLQ 134 Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 26/81 (32%), Gaps = 6/81 (7%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56 FN+ +A A RL+T + N++N D+V ++ F + D Sbjct: 5 NVFNVTGSAMSAESVRLNTTSSNLANADSVSSSAKDTYKARHAVFGAELSNAMRGGDTVP 64 Query: 57 SFVASGKEYLSKEVGSFISTG 77 V E + Sbjct: 65 VKVMGIVESDKPLNAEYNPDH 85 >gi|144245|gb|AAA23042.1| hook protein [Caulobacter vibrioides] Length = 52 Score = 52.2 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 27/46 (58%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA 47 ++ G++ +A L+ ++DN++N +TVGF+ FS +V + Sbjct: 4 NSAMLAGVSGLIANSSALAAISDNIANVNTVGFKRSTSNFSTLVTS 49 >gi|86151838|ref|ZP_01070052.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp. jejuni 260.94] gi|148925898|ref|ZP_01809585.1| flagellar basal-body rod protein [Campylobacter jejuni subsp. jejuni CG8486] gi|157414808|ref|YP_001482064.1| flagellar basal body rod protein FlgC [Campylobacter jejuni subsp. jejuni 81116] gi|205355383|ref|ZP_03222154.1| flagellar basaL body rod protein [Campylobacter jejuni subsp. jejuni CG8421] gi|283954185|ref|ZP_06371710.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp. jejuni 414] gi|283955949|ref|ZP_06373439.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp. jejuni 1336] gi|315124050|ref|YP_004066054.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85841467|gb|EAQ58715.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp. jejuni 260.94] gi|145844884|gb|EDK21988.1| flagellar basal-body rod protein [Campylobacter jejuni subsp. jejuni CG8486] gi|157385772|gb|ABV52087.1| flagellar basal-body rod protein [Campylobacter jejuni subsp. jejuni 81116] gi|205346617|gb|EDZ33249.1| flagellar basaL body rod protein [Campylobacter jejuni subsp. jejuni CG8421] gi|283792609|gb|EFC31388.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp. jejuni 1336] gi|283794464|gb|EFC33208.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp. jejuni 414] gi|284925790|gb|ADC28142.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp. jejuni IA3902] gi|315017772|gb|ADT65865.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315931721|gb|EFV10676.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp. jejuni 327] Length = 164 Score = 51.8 bits (122), Expect = 7e-05, Method: Composition-based stats. Identities = 9/46 (19%), Positives = 19/46 (41%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G++ N N + EM +I T+ + + + + AI + Sbjct: 118 GYVAYPNVNPVIEMADLIEATRAYQANVSAFTSAKTIAQSAIDLLR 163 Score = 43.3 bits (100), Expect = 0.031, Method: Composition-based stats. Identities = 9/39 (23%), Positives = 18/39 (46%), Gaps = 6/39 (15%) Query: 11 AQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43 A R++ ++ N++N +T G +R +V F Sbjct: 13 GLSAQRFRMNVISSNIANANTTRTAEGGPYRRREVIFKA 51 >gi|323703167|ref|ZP_08114820.1| flagellar basal-body rod protein FlgC [Desulfotomaculum nigrificans DSM 574] gi|323531826|gb|EGB21712.1| flagellar basal-body rod protein FlgC [Desulfotomaculum nigrificans DSM 574] Length = 145 Score = 51.8 bits (122), Expect = 7e-05, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 27/60 (45%) Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 P P E + + + G + N N + EM MI ++ + + T ++ + L+A+ Sbjct: 81 PAPPRIVHEPDNPLADQDGNVAYPNINIVNEMVDMITASRAYEANVTALNAAKSMALKAL 140 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 13/88 (14%), Positives = 29/88 (32%), Gaps = 9/88 (10%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVG---------FRTIKVKFSEVVGAIKNDIDQ 54 SF I + + RL +A+N++N +T G +R F+E + Sbjct: 6 SFAISASGMTSERLRLDLIANNVANMNTAGRPNDPNNPVYRRRVPVFAEQLRQTMAANST 65 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDF 82 + + + ++ + Sbjct: 66 EPRGAGVRVKAIVEDPAPPRIVHEPDNP 93 >gi|212640402|ref|YP_002316922.1| flagellar hook-associated protein FlgK [Anoxybacillus flavithermus WK1] gi|212561882|gb|ACJ34937.1| Flagellar hook-associated protein [Anoxybacillus flavithermus WK1] Length = 513 Score = 51.8 bits (122), Expect = 7e-05, Method: Composition-based stats. Identities = 11/72 (15%), Positives = 24/72 (33%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A +Q L N++N +T G+ +V F + ++ + G V Sbjct: 14 GMTAQQQALYVTGHNIANANTPGYSRQRVNFEQTPPYPFASKNRPVMPGQMGTGVEGGTV 73 Query: 71 GSFISTGTELDF 82 ++ + Sbjct: 74 QRMREQFLDVQY 85 Score = 51.8 bits (122), Expect = 8e-05, Method: Composition-based stats. Identities = 12/80 (15%), Positives = 29/80 (36%), Gaps = 4/80 (5%) Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLED----SNANSMYEMGQMIHLTQKFNS 222 Q F ++ N + +++ E S+ + EM M+ +N+ Sbjct: 430 QNFYESLIGQMAVNAQEAKRLSENSEVLRQSVDERRMAVSSVSLDEEMMNMMKFQHAYNA 489 Query: 223 ITTLIDENEKSMLEAIRNIA 242 +I ++ + + I N+ Sbjct: 490 SARMITMIDQMLDKIINNMG 509 >gi|313497768|gb|ADR59134.1| FlgK [Pseudomonas putida BIRD-1] Length = 680 Score = 51.8 bits (122), Expect = 7e-05, Method: Composition-based stats. Identities = 11/52 (21%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + +IGL+ A + LS ++N++N T G+ + + Sbjct: 1 MSSLISIGLSGLSASQAALSVTSNNIANAATSGYSRQQTVQAAGPSHNIGAG 52 >gi|146311244|ref|YP_001176318.1| flagellar basal body rod protein FlgC [Enterobacter sp. 638] gi|145318120|gb|ABP60267.1| flagellar basal-body rod protein FlgC [Enterobacter sp. 638] Length = 134 Score = 51.8 bits (122), Expect = 7e-05, Method: Composition-based stats. Identities = 6/43 (13%), Positives = 22/43 (51%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G+++ N + + EM + ++ + + +++ + ML+ + Sbjct: 89 GYVKMPNVDVVGEMVNTMSASRSYQANVEVLNTVKSMMLKTLT 131 Score = 37.5 bits (85), Expect = 1.7, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 6/47 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42 F+I +A A QRL+ A NM+N G +R +V F Sbjct: 4 LNIFDIAGSALTAQSQRLNVAASNMANADSVTGPDGQPYRAKQVVFQ 50 >gi|262166284|ref|ZP_06034021.1| flagellar basal-body rod protein FlgC [Vibrio mimicus VM223] gi|262026000|gb|EEY44668.1| flagellar basal-body rod protein FlgC [Vibrio mimicus VM223] Length = 71 Score = 51.8 bits (122), Expect = 7e-05, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 23/43 (53%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N M EM MI ++ + + + D +++ +L ++ Sbjct: 26 GYIYKPNVNVMEEMANMISASRSYQTNVQVADASKQMLLRTLQ 68 >gi|239628951|ref|ZP_04671982.1| flagellar basal-body rod protein FlgC [Clostridiales bacterium 1_7_47_FAA] gi|239519097|gb|EEQ58963.1| flagellar basal-body rod protein FlgC [Clostridiales bacterium 1_7_47FAA] Length = 144 Score = 51.8 bits (122), Expect = 7e-05, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 22/42 (52%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N NS EM ++ ++ + + T ++ + L+A+ Sbjct: 99 GYVMMPNVNSAEEMVDLMAASRAYEANVTALNIAKSMALKAL 140 Score = 38.3 bits (87), Expect = 0.85, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 6/46 (13%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43 S NI +A A R + N++N +T G +R +V F E Sbjct: 6 SLNITGSALTAERFRTDIIMQNLANQNTTRTADGGPYRRKQVVFRE 51 >gi|134095099|ref|YP_001100174.1| basal-body rod protein [Herminiimonas arsenicoxydans] gi|133739002|emb|CAL62050.1| Flagellar basal-body rod protein FlgC (Putative proximal rod protein) [Herminiimonas arsenicoxydans] Length = 134 Score = 51.8 bits (122), Expect = 7e-05, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 20/43 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G + N N + EM MI ++ + + ++ + +L+ + Sbjct: 89 GHVAMPNVNVVEEMVNMISASRSYQTNVETMNAAKTMLLKTLT 131 Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 39/120 (32%), Gaps = 6/120 (5%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSEVVGAIKNDIDQKI 56 FN+ +A A QRL+ V+ N++N T +R +V+F V A K+ Sbjct: 5 NIFNVAGSAMSAQSQRLNVVSSNIANAESTTSADGKTYRAKQVEFQSVPMAGATSTGVKV 64 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVS 116 V L E + E I +R + V + + Sbjct: 65 RQVVEDASPLKMVFDPKHPNADETGHVAMPNVNVVEEMVNMISASRSYQTNVETMNAAKT 124 >gi|261840251|gb|ACY00017.1| flagellar basal body rod protein FlgC [Helicobacter pylori 52] gi|332674370|gb|AEE71187.1| flagellar basal-body rod protein FlgC [Helicobacter pylori 83] Length = 161 Score = 51.8 bits (122), Expect = 8e-05, Method: Composition-based stats. Identities = 8/44 (18%), Positives = 19/44 (43%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 +G++ N N++ EM ++ T+ + + + AI Sbjct: 113 AQGYVAYPNVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAI 156 Score = 39.5 bits (90), Expect = 0.40, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 6/49 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44 +SF+I A R + ++ N++N +T G +R + F Sbjct: 3 LSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFKAF 51 >gi|163750564|ref|ZP_02157802.1| hypothetical flagellar hook-associated protein [Shewanella benthica KT99] gi|161329719|gb|EDQ00708.1| hypothetical flagellar hook-associated protein [Shewanella benthica KT99] Length = 637 Score = 51.8 bits (122), Expect = 8e-05, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 23/51 (45%), Gaps = 1/51 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51 M NI LA + +L+ ++N++N +T G+ + S + D Sbjct: 3 MD-LLNIARTGVLASQAQLAVTSNNIANVNTQGYHRQVAEQSSLESQRLGD 52 Score = 40.6 bits (93), Expect = 0.19, Method: Composition-based stats. Identities = 4/41 (9%), Positives = 13/41 (31%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E ++ Q + + ++ + + + Sbjct: 597 SGVNLDEEAANLMRFQQAYQASARIMTTANEIFETLLNAVR 637 >gi|108563932|ref|YP_628248.1| flagellar basal body rod protein FlgC [Helicobacter pylori HPAG1] gi|188528350|ref|YP_001911037.1| flagellar basal body rod protein FlgC [Helicobacter pylori Shi470] gi|217033829|ref|ZP_03439254.1| hypothetical protein HP9810_877g33 [Helicobacter pylori 98-10] gi|107837705|gb|ABF85574.1| flagellar basal-body rod protein [Helicobacter pylori HPAG1] gi|188144590|gb|ACD49007.1| flagellar basal body rod protein FlgC [Helicobacter pylori Shi470] gi|216943727|gb|EEC23170.1| hypothetical protein HP9810_877g33 [Helicobacter pylori 98-10] gi|308062841|gb|ADO04729.1| flagellar basal body rod protein FlgC [Helicobacter pylori Cuz20] gi|315585965|gb|ADU40346.1| flagellar basal-body rod protein FlgC [Helicobacter pylori 35A] gi|317013372|gb|ADU83980.1| flagellar basal body rod protein FlgC [Helicobacter pylori Lithuania75] gi|317179760|dbj|BAJ57548.1| flagellar basal body rod protein FlgC [Helicobacter pylori F30] gi|317181261|dbj|BAJ59047.1| flagellar basal body rod protein FlgC [Helicobacter pylori F32] Length = 161 Score = 51.8 bits (122), Expect = 8e-05, Method: Composition-based stats. Identities = 8/44 (18%), Positives = 19/44 (43%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 +G++ N N++ EM ++ T+ + + + AI Sbjct: 113 AQGYVAYPNVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAI 156 Score = 39.5 bits (90), Expect = 0.40, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 6/49 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44 +SF+I A R + ++ N++N +T G +R + F Sbjct: 3 LSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFKAF 51 >gi|322379367|ref|ZP_08053738.1| flagellar basal body rod protein FlgC [Helicobacter suis HS1] gi|322380862|ref|ZP_08054952.1| flagellar basal body rod protein FlgC [Helicobacter suis HS5] gi|321146713|gb|EFX41523.1| flagellar basal body rod protein FlgC [Helicobacter suis HS5] gi|321148185|gb|EFX42714.1| flagellar basal body rod protein FlgC [Helicobacter suis HS1] Length = 165 Score = 51.8 bits (122), Expect = 8e-05, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 17/42 (40%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N N + EM +I T+ + + + AI Sbjct: 119 GYVSYPNVNPVVEMADLIEATRAYQANVAAFQSTKNMAANAI 160 Score = 40.6 bits (93), Expect = 0.17, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 6/49 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44 +SF+I A R + ++ N++N +T G +R + F Sbjct: 5 LSSFDISGYGLSAQRVRANLISSNIANANTTRTDEGGPYRRQEAVFKSF 53 >gi|26991070|ref|NP_746495.1| flagellar hook-associated protein FlgK [Pseudomonas putida KT2440] gi|24986104|gb|AAN69959.1|AE016634_8 flagellar hook-associated protein FlgK [Pseudomonas putida KT2440] Length = 680 Score = 51.8 bits (122), Expect = 8e-05, Method: Composition-based stats. Identities = 11/52 (21%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + +IGL+ A + LS ++N++N T G+ + + Sbjct: 1 MSSLISIGLSGLSASQAALSVTSNNIANAATSGYSRQQTVQAAGPSHNIGAG 52 >gi|254466614|ref|ZP_05080025.1| flagellar basal-body rod protein FlgC [Rhodobacterales bacterium Y4I] gi|206687522|gb|EDZ48004.1| flagellar basal-body rod protein FlgC [Rhodobacterales bacterium Y4I] Length = 130 Score = 51.8 bits (122), Expect = 8e-05, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 22/42 (52%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44 + ++ + A RL V++N+SN DT G+R V F V Sbjct: 6 KALSVTASGLKAQAARLRHVSENISNADTPGYRRKAVPFESV 47 Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 8/48 (16%), Positives = 19/48 (39%), Gaps = 3/48 (6%) Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS---MLEAIRN 240 G E SN + M E+ + + + + ++ ++E +R Sbjct: 83 SGHFEGSNVDLMIEIADAREAQRSYEANLKMFEQTRSMSASLMELLRR 130 >gi|157961169|ref|YP_001501203.1| flagellar basal body rod protein FlgC [Shewanella pealeana ATCC 700345] gi|157846169|gb|ABV86668.1| flagellar basal-body rod protein FlgC [Shewanella pealeana ATCC 700345] Length = 138 Score = 51.8 bits (122), Expect = 8e-05, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 20/43 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 GF+ N N M EM MI ++ + + + + + + +R Sbjct: 93 GFIYKPNVNVMEEMANMISASRSYQMNVQVTEAAKSMLQQTLR 135 Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 27/84 (32%), Gaps = 6/84 (7%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56 FN+ + A RL+T A N++N D+V +R F + + Sbjct: 5 NIFNVAGSGMSAQSVRLNTTASNIANADSVSSSVGETYRARHPIFEAEMSKAQQHQSAAQ 64 Query: 57 SFVASGKEYLSKEVGSFISTGTEL 80 S G + S + Sbjct: 65 SVAVKGIVESDLPLNKEFSPDHPM 88 >gi|307265481|ref|ZP_07547036.1| flagellar hook-associated protein FlgK [Thermoanaerobacter wiegelii Rt8.B1] gi|306919435|gb|EFN49654.1| flagellar hook-associated protein FlgK [Thermoanaerobacter wiegelii Rt8.B1] Length = 480 Score = 51.8 bits (122), Expect = 8e-05, Method: Composition-based stats. Identities = 7/41 (17%), Positives = 16/41 (39%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S + EM MI + + + +I ++ + I + Sbjct: 436 SGVSLDEEMTNMIKYQKSYAASARVITAMDELLDTLINRMG 476 Score = 51.0 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 7/54 (12%), Positives = 17/54 (31%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56 I ++ L N++N +T G+ V + + + + Sbjct: 5 QGLEIAKTGLFVSQKALDVTGHNIANANTTGYTRQVVDMASIAPPTTFGMYDQW 58 >gi|218516400|ref|ZP_03513240.1| flagellar hook protein FlgE [Rhizobium etli 8C-3] Length = 126 Score = 51.8 bits (122), Expect = 8e-05, Method: Composition-based stats. Identities = 12/32 (37%), Positives = 21/32 (65%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFR 35 S ++ A RLSTV+DN+++ +TVG++ Sbjct: 31 SMKTAVSGMSAQANRLSTVSDNIADANTVGYK 62 >gi|23016761|ref|ZP_00056514.1| COG1558: Flagellar basal body rod protein [Magnetospirillum magnetotacticum MS-1] Length = 138 Score = 51.8 bits (122), Expect = 8e-05, Method: Composition-based stats. Identities = 8/41 (19%), Positives = 16/41 (39%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 G++ N N + EM M + + + +I + M Sbjct: 93 GYVLAPNVNPLIEMMDMREAQRSYEANLQVIQTSRTMMDRT 133 Score = 38.3 bits (87), Expect = 0.95, Method: Composition-based stats. Identities = 9/33 (27%), Positives = 15/33 (45%), Gaps = 3/33 (9%) Query: 1 MQTSFN---IGLAAQLALEQRLSTVADNMSNTD 30 M N I + QRL +++N++N D Sbjct: 3 MDPLMNSSKIAKSGLKVQSQRLRVISENLANAD 35 >gi|311068140|ref|YP_003973063.1| flagellar basal body rod protein FlgC [Bacillus atrophaeus 1942] gi|310868657|gb|ADP32132.1| flagellar basal body rod protein FlgC [Bacillus atrophaeus 1942] Length = 149 Score = 51.8 bits (122), Expect = 8e-05, Method: Composition-based stats. Identities = 9/46 (19%), Positives = 26/46 (56%), Gaps = 1/46 (2%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G+++ N + + EM ++ T+ + + T ++ ++ +L+A+ I Sbjct: 104 GYVQKPNVDPLKEMVDLVSSTRSYEANVTAMNASKGMLLKAL-EIG 148 Score = 43.3 bits (100), Expect = 0.033, Method: Composition-based stats. Identities = 10/30 (33%), Positives = 16/30 (53%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV 32 S N+ +A A R+ V+ N++N DT Sbjct: 5 QSLNVSGSALTAQRVRMDVVSSNLANMDTT 34 >gi|325274792|ref|ZP_08140821.1| flagellar hook-associated protein FlgK [Pseudomonas sp. TJI-51] gi|324100073|gb|EGB97890.1| flagellar hook-associated protein FlgK [Pseudomonas sp. TJI-51] Length = 680 Score = 51.8 bits (122), Expect = 8e-05, Method: Composition-based stats. Identities = 11/39 (28%), Positives = 21/39 (53%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39 M + +IGL+ A + LS ++N++N T G+ + Sbjct: 1 MSSLISIGLSGLNASQAALSVTSNNIANAATSGYSRQQT 39 >gi|315452789|ref|YP_004073059.1| flagellar basal-body rod protein [Helicobacter felis ATCC 49179] gi|315131841|emb|CBY82469.1| flagellar basal-body rod protein [Helicobacter felis ATCC 49179] Length = 163 Score = 51.8 bits (122), Expect = 8e-05, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 17/42 (40%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N N + EM +I T+ + + + AI Sbjct: 117 GYVSYPNVNPVVEMADLIEATRAYQANVAAFQSTKNMATNAI 158 Score = 40.2 bits (92), Expect = 0.26, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 6/49 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44 +SF+I A R + ++ N++N +T G +R + F Sbjct: 3 LSSFDISGYGLSAQRVRANLISSNIANANTTRTDEGGPYRRQEAIFKSF 51 >gi|319944137|ref|ZP_08018415.1| flagellar basal-body rod protein FlgC [Lautropia mirabilis ATCC 51599] gi|319742631|gb|EFV95040.1| flagellar basal-body rod protein FlgC [Lautropia mirabilis ATCC 51599] Length = 149 Score = 51.8 bits (122), Expect = 8e-05, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 23/43 (53%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ SN N + EM MI ++ + + +++ ++ L+ + Sbjct: 104 GYVMHSNVNVIEEMVNMISASRSYQNNVEMMNTAQQLALKTLS 146 Score = 41.0 bits (94), Expect = 0.14, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 9/64 (14%) Query: 1 MQTSFNI---GLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKND 51 M + NI +A A QRL+TVA N++N DTV ++ +V F + + Sbjct: 1 MSSLMNILPLAGSALSAQSQRLNTVASNLANADTVAGPDGSVYKARQVVFKPAMVEARQA 60 Query: 52 IDQK 55 + Sbjct: 61 AGAR 64 >gi|317182784|dbj|BAJ60568.1| flagellar basal body rod protein FlgC [Helicobacter pylori F57] Length = 161 Score = 51.8 bits (122), Expect = 8e-05, Method: Composition-based stats. Identities = 8/44 (18%), Positives = 19/44 (43%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 +G++ N N++ EM ++ T+ + + + AI Sbjct: 113 AQGYVAYPNVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAI 156 Score = 39.5 bits (90), Expect = 0.43, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 6/49 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44 +SF+I A R + ++ N++N +T G +R + F Sbjct: 3 LSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFKAF 51 >gi|207093272|ref|ZP_03241059.1| flagellar hook protein FlgE [Helicobacter pylori HPKX_438_AG0C1] Length = 40 Score = 51.8 bits (122), Expect = 8e-05, Method: Composition-based stats. Identities = 3/37 (8%), Positives = 16/37 (43%) Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 N + + +I + + F + + + +++ + + Sbjct: 1 NVDLSRSLTNLIVVQRGFQANSKAVTTSDQILNTLLN 37 >gi|83589598|ref|YP_429607.1| flagellar hook-associated protein FlgK [Moorella thermoacetica ATCC 39073] gi|83572512|gb|ABC19064.1| Flagellar hook-associated protein [Moorella thermoacetica ATCC 39073] Length = 486 Score = 51.8 bits (122), Expect = 8e-05, Method: Composition-based stats. Identities = 12/97 (12%), Positives = 30/97 (30%), Gaps = 9/97 (9%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFL--------ED-SNAN 205 IA + ++ + + + +T +G L E S + Sbjct: 387 IAQLQHKLIENLDNTTFDDYYKNFTAKLGVDAHEATRMTTNQGVLVDQLTNRKESISGVS 446 Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 EM M+ + + + +I + + + I + Sbjct: 447 LDEEMANMLQYLRAYEASARMITTLDSMLDKIINGMG 483 Score = 49.1 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 13/85 (15%), Positives = 27/85 (31%), Gaps = 1/85 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 FN L A ++ + T + N++N +T G+ +V + A + Sbjct: 7 GFNTALRGMQAQQRGIYTTSHNIANANTEGYTRQQVVLTAT-PAYPVPAMNRPGGQGWQI 65 Query: 64 EYLSKEVGSFISTGTELDFALEGDA 88 + LD + + Sbjct: 66 GTGVDSQETRRLRDEFLDTQIRRET 90 >gi|269965426|ref|ZP_06179545.1| Flagellar basal-body rod protein flgC [Vibrio alginolyticus 40B] gi|269829905|gb|EEZ84135.1| Flagellar basal-body rod protein flgC [Vibrio alginolyticus 40B] Length = 70 Score = 51.8 bits (122), Expect = 8e-05, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 23/43 (53%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N M EM MI ++ + + + D +++ +L ++ Sbjct: 25 GYIYKPNVNVMEEMANMISASRAYQTNVQVADSSKQMLLRTLQ 67 >gi|154686035|ref|YP_001421196.1| flagellar basal body rod protein FlgC [Bacillus amyloliquefaciens FZB42] gi|154351886|gb|ABS73965.1| FlgC [Bacillus amyloliquefaciens FZB42] Length = 150 Score = 51.8 bits (122), Expect = 8e-05, Method: Composition-based stats. Identities = 9/46 (19%), Positives = 26/46 (56%), Gaps = 1/46 (2%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G+++ N + + EM ++ T+ + + T ++ ++ +L+A+ I Sbjct: 105 GYVQKPNVDPLKEMVDLVSSTRSYEANVTALNASKGMLLKAL-EIG 149 Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 35/114 (30%), Gaps = 17/114 (14%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV------G----FRTIKV-------KFSEVV 45 S NI +A A R+ V+ N++N DT G +R V FS ++ Sbjct: 5 QSLNISGSALTAQRVRMDVVSSNLANMDTTRAKQVNGEWVPYRRKLVSLQSGGESFSSLL 64 Query: 46 GAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 + N + V + + D +G P + Sbjct: 65 HSKMNGTGSAGNGVKVSGVTEDPSAFNLVYDPENPDANKDGYVQKPNVDPLKEM 118 >gi|15646165|ref|NP_208349.1| flagellar basal body rod protein FlgC [Helicobacter pylori 26695] gi|217031711|ref|ZP_03437215.1| hypothetical protein HPB128_155g24 [Helicobacter pylori B128] gi|298737153|ref|YP_003729683.1| flagellar basal-body rod protein FlgC [Helicobacter pylori B8] gi|2314741|gb|AAD08598.1| flagellar basal-body rod protein (flgC) [Helicobacter pylori 26695] gi|216946558|gb|EEC25158.1| hypothetical protein HPB128_155g24 [Helicobacter pylori B128] gi|298356347|emb|CBI67219.1| flagellar basal-body rod protein FlgC [Helicobacter pylori B8] Length = 161 Score = 51.8 bits (122), Expect = 8e-05, Method: Composition-based stats. Identities = 8/44 (18%), Positives = 19/44 (43%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 +G++ N N++ EM ++ T+ + + + AI Sbjct: 113 AQGYVAYPNVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAI 156 Score = 39.5 bits (90), Expect = 0.42, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 6/49 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44 +SF+I A R + ++ N++N +T G +R + F Sbjct: 3 LSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFKAF 51 >gi|327441344|dbj|BAK17709.1| flagellar hook-associated protein [Solibacillus silvestris StLB046] Length = 562 Score = 51.8 bits (122), Expect = 8e-05, Method: Composition-based stats. Identities = 8/39 (20%), Positives = 18/39 (46%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 + EM MI Q +N+ +I ++++ + I + Sbjct: 520 VSLDEEMTNMITFQQAYNANARMITVIDETLDKIINGMG 558 Score = 39.5 bits (90), Expect = 0.37, Method: Composition-based stats. Identities = 9/44 (20%), Positives = 17/44 (38%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54 + L T N+SN +T+G+ +V G ++ Sbjct: 14 GLYTQQSALYTTGHNISNANTLGYSRQRVNMETTPGFPGAGLNS 57 >gi|315127355|ref|YP_004069358.1| flagellar biosynthesis; cell-proximal portion of basal-body rod [Pseudoalteromonas sp. SM9913] gi|315015869|gb|ADT69207.1| flagellar biosynthesis; cell-proximal portion of basal-body rod [Pseudoalteromonas sp. SM9913] Length = 143 Score = 51.8 bits (122), Expect = 8e-05, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 21/42 (50%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N N + EM MI ++ + + + D ++ + + + Sbjct: 97 GYIYKPNVNVVEEMANMISASRSYQTNVQVADAAKQMLSKTL 138 Score = 38.7 bits (88), Expect = 0.70, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 36/96 (37%), Gaps = 7/96 (7%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKF-SEVVGAIKNDIDQK 55 F+I + A RL+T A N+SN +T+ +R + F +E+ A + + + Sbjct: 5 NVFDIAGSGMSAQNVRLNTTASNISNANTISSSQNETYRARQPVFAAELTKASASASNPQ 64 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA 91 S V + + + + + + Sbjct: 65 GSAVGVKVLGVVESNKPLQIEYNPNHPSADENGYIY 100 >gi|205373369|ref|ZP_03226173.1| flagellar basal body rod protein FlgC [Bacillus coahuilensis m4-4] Length = 149 Score = 51.8 bits (122), Expect = 8e-05, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 26/42 (61%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G+++ N + + EM +I T+ + + T+++ N+ +++++ Sbjct: 104 GYVKMPNVDPLREMTDLISATRSYEANVTVMNANKALLMKSL 145 Score = 43.7 bits (101), Expect = 0.021, Method: Composition-based stats. Identities = 10/30 (33%), Positives = 16/30 (53%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV 32 S NI +A A R+ ++ N++N DT Sbjct: 5 QSINISTSALTAQRLRMDVISSNVANADTT 34 >gi|262173360|ref|ZP_06041037.1| flagellar hook-associated protein FlgK [Vibrio mimicus MB-451] gi|261890718|gb|EEY36705.1| flagellar hook-associated protein FlgK [Vibrio mimicus MB-451] Length = 457 Score = 51.8 bits (122), Expect = 8e-05, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 18/43 (41%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44 NI L+ A L A N++N +T GF + + V Sbjct: 1 MNIVNIALSGLNANRVALDVTAQNVANINTPGFSRQQAIMTSV 43 Score = 35.6 bits (80), Expect = 6.0, Method: Composition-based stats. Identities = 11/92 (11%), Positives = 30/92 (32%), Gaps = 5/92 (5%) Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLED----SNANSM 207 K +A G ++ ++ F + + ++ + +E S NS Sbjct: 365 NKPVAITGFGNISINDAFTSMVGETAIKARQAD-SDYQTRTSMNQQAIESRNNVSAVNSD 423 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E ++ +N+ +I + ++ Sbjct: 424 EEAANLMTFANAYNANMKVISTANQLFDSVLQ 455 >gi|83647176|ref|YP_435611.1| flagellar basal body rod protein FlgB [Hahella chejuensis KCTC 2396] gi|83635219|gb|ABC31186.1| Flagellar basal body protein [Hahella chejuensis KCTC 2396] Length = 131 Score = 51.8 bits (122), Expect = 8e-05, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 23/49 (46%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50 + I A +R +A+N++N DT GFR + F V+ K+ Sbjct: 6 DKALGIHEQALNVRTRRAEVLANNIANADTPGFRARDIDFKAVLRQAKS 54 >gi|192361114|ref|YP_001982394.1| flagellar hook-associated protein 1 FlgK [Cellvibrio japonicus Ueda107] gi|190687279|gb|ACE84957.1| flagellar hook-associated protein 1 FlgK [Cellvibrio japonicus Ueda107] Length = 923 Score = 51.8 bits (122), Expect = 8e-05, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 23/63 (36%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + ++ A + L T N+SN +T G+ +V +S S V Sbjct: 1 MSGILSNAISGLQASQNALRTAGHNISNANTTGYTRQQVVYSTRPEQSAGAAGFVGSGVT 60 Query: 61 SGK 63 + Sbjct: 61 TTS 63 Score = 39.9 bits (91), Expect = 0.32, Method: Composition-based stats. Identities = 6/40 (15%), Positives = 13/40 (32%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 S N E +I Q + + +I + + + Sbjct: 884 SGVNLDEEAADLIRFQQLYQANARVITVARELFDTLLNAL 923 >gi|323705449|ref|ZP_08117024.1| flagellar basal-body rod protein FlgB [Thermoanaerobacterium xylanolyticum LX-11] gi|323535351|gb|EGB25127.1| flagellar basal-body rod protein FlgB [Thermoanaerobacterium xylanolyticum LX-11] Length = 136 Score = 51.8 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 21/41 (51%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51 A A E R +++N++N DT GF+ V F ++ N Sbjct: 15 ALDASELRNEVISNNIANVDTPGFKRSDVNFESILNDAINS 55 >gi|317011794|gb|ADU85541.1| flagellar basal body rod protein FlgC [Helicobacter pylori SouthAfrica7] Length = 161 Score = 51.8 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 8/44 (18%), Positives = 19/44 (43%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 +G++ N N++ EM ++ T+ + + + AI Sbjct: 113 AQGYVAYPNVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAI 156 Score = 39.5 bits (90), Expect = 0.44, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 6/49 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44 +SF+I A R + ++ N++N +T G +R + F Sbjct: 3 LSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFKAF 51 >gi|189426355|ref|YP_001953532.1| flagellar basal-body rod protein FlgC [Geobacter lovleyi SZ] gi|189422614|gb|ACD97012.1| flagellar basal-body rod protein FlgC [Geobacter lovleyi SZ] Length = 145 Score = 51.8 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 19/43 (44%) Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 +G++ N N + EM MI T+ + + + L+ + Sbjct: 99 QGYVALPNVNVVEEMADMITATRVYEANVMSAQAAKNMALKTL 141 Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 11/51 (21%), Positives = 23/51 (45%), Gaps = 8/51 (15%) Query: 1 MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43 M T+ N +A A R++ ++ N++N +T G ++ F+ Sbjct: 1 MDLFTAMNTSSSALTAERTRMNLISSNLANVNTTRTPEGGPYKRKDAVFAA 51 >gi|86139479|ref|ZP_01058048.1| flagellar basal-body rod protein FlgC [Roseobacter sp. MED193] gi|85823982|gb|EAQ44188.1| flagellar basal-body rod protein FlgC [Roseobacter sp. MED193] Length = 130 Score = 51.8 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 21/41 (51%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 S ++ + A RL V++N+SN DT G+R V F Sbjct: 6 NSLSVTASGLKAQATRLRHVSENISNADTPGYRRKSVPFEA 46 Score = 41.8 bits (96), Expect = 0.084, Method: Composition-based stats. Identities = 6/38 (15%), Positives = 15/38 (39%) Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 G E SN + M E+ + +++ + ++ Sbjct: 83 SGHYEGSNVDLMIEIADAREAQRSYDANLKMFEQTRGM 120 >gi|294339836|emb|CAZ88199.1| putative flagellar hook-associated protein FlgK [Thiomonas sp. 3As] Length = 667 Score = 51.8 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 9/47 (19%), Positives = 18/47 (38%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51 N L A + L +N++N +T G+ S + ++ Sbjct: 8 LNNALTGLQAAQSALQVTGNNIANVNTPGYSRETAVQSTLTPSLYGG 54 >gi|299531280|ref|ZP_07044690.1| flagellar hook-associated protein FlgK [Comamonas testosteroni S44] gi|298720687|gb|EFI61634.1| flagellar hook-associated protein FlgK [Comamonas testosteroni S44] Length = 648 Score = 51.8 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 22/51 (43%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 + N+G A +A + L T N++N +T G+ V F G + Sbjct: 1 MSLLNVGARALMANQIALQTTGHNIANVNTAGYSRQSVAFQTSAGQNIGNG 51 Score = 35.2 bits (79), Expect = 8.0, Method: Composition-based stats. Identities = 5/41 (12%), Positives = 15/41 (36%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E +++ Q + + ++ + I+ + Sbjct: 607 SGVNLDEEAAKLLQYQQSYQASAKMLQVAQGIFDSVIQAVG 647 >gi|160901877|ref|YP_001567458.1| flagellar hook-associated protein FlgK [Petrotoga mobilis SJ95] gi|160359521|gb|ABX31135.1| flagellar hook-associated protein FlgK [Petrotoga mobilis SJ95] Length = 818 Score = 51.8 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 33/225 (14%), Positives = 54/225 (24%), Gaps = 12/225 (5%) Query: 28 NTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGD 87 N G V N ID + V FI + L Sbjct: 594 NATNTGVTASVTPHGSFVLRAGNLIDFDLKNVTIKGPEKLFNALGFIEDDSNNIVTLISP 653 Query: 88 AWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGE 147 + K+ ++ +V+ L + N G Sbjct: 654 D--ISPEQIDEKFSEADLLKIDNELGIVNQISVSSNLKENPSLLATDLGYYDINYSPTGA 711 Query: 148 ISQKG-KVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFL--EDS-- 202 + I+ M SV + G E + + L E S Sbjct: 712 GNVSVWDEISKMYDNSVLDNGRVGFSNFLGNIVTDIGVKGETADKMRLNSEMLNSEISLE 771 Query: 203 -----NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 + EM ++ Q FN+ +I + M I N+ Sbjct: 772 KERVMGVSIDEEMTNLVKYQQAFNASARVITAVNQMMETVINNLG 816 >gi|168187526|ref|ZP_02622161.1| flagellar hook-associated protein FlgK [Clostridium botulinum C str. Eklund] gi|169294577|gb|EDS76710.1| flagellar hook-associated protein FlgK [Clostridium botulinum C str. Eklund] Length = 678 Score = 51.8 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 11/90 (12%), Positives = 32/90 (35%), Gaps = 4/90 (4%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV----VGAIKNDIDQKISF 58 ++ N+G A + L + N++N++T G+ + + ++ N + Sbjct: 6 STLNVGKRGLYAQQGALDVTSHNIANSNTKGYTRQRALMETTRPFGMPSMDNQVGPGQIG 65 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDA 88 + + +F+ + + G Sbjct: 66 TGVEISKIQRVRDTFMDYQVRRETSTLGQY 95 Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 5/40 (12%), Positives = 15/40 (37%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 S + EM ++ + + +I ++ + I + Sbjct: 637 SGVSLNEEMANIVQYQHAYQANAKIIATTDQLLDVVINGL 676 >gi|254780090|ref|YP_003058197.1| flagellar basal body rod protein FlgC [Helicobacter pylori B38] gi|254002003|emb|CAX30262.1| Flagellar basal-body rod protein FlgC [Helicobacter pylori B38] Length = 161 Score = 51.8 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 8/44 (18%), Positives = 19/44 (43%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 +G++ N N++ EM ++ T+ + + + AI Sbjct: 113 AQGYVAYPNVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAI 156 Score = 39.9 bits (91), Expect = 0.33, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 6/49 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44 +SF+I A R + ++ N++N +T G +R + F Sbjct: 3 LSSFDISGYGLSAQRLRANLISSNIANVNTTRTSEGGPYRRQEAVFKAF 51 >gi|220927554|ref|YP_002504463.1| flagellar hook-associated protein FlgK [Clostridium cellulolyticum H10] gi|219997882|gb|ACL74483.1| flagellar hook-associated protein FlgK [Clostridium cellulolyticum H10] Length = 537 Score = 51.8 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 23/80 (28%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 NI L+ ++ L TV N+SN T G+ + S D + + Sbjct: 7 GLNIALSGLYTAQRNLDTVGHNLSNASTPGYSRQQSIQSASNPLAVMDGTGMVGTGSQVT 66 Query: 64 EYLSKEVGSFISTGTELDFA 83 + A Sbjct: 67 GVERIRDTYLDFKYWSENVA 86 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 27/222 (12%), Positives = 66/222 (29%), Gaps = 11/222 (4%) Query: 32 VGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA 91 ++ +F N+ + + G E+ ++L A G +F Sbjct: 314 PYYQRKLNEFVRTFAINFNEGYTRNDALPDGYEHNGVGHIEGYGYDSDLTDAPTGIRFFT 373 Query: 92 LESPRGIIL-------TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGE 144 + + T + + + ++A D+ +I D G Sbjct: 374 MLCVGDTPISGSAFIGTATSVGDIANQYNQITAKNFSVSSDIIDDANRIATSDADGQNGN 433 Query: 145 KGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP-PTPLEDLSGVTVKR---GFLE 200 + + + + L+ + F++ +G+ + V++ + Sbjct: 434 TNILKKLMGIRSNQSLFKEGAPEDFMKSLVAGMGIDAQQAETFAKTQKALVRQVDNRRMS 493 Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N EM M+ Q +N+ +I + I + Sbjct: 494 VSGVNLNEEMTNMVKFQQSYNAAARMIVTMGEIYDTLINRLG 535 >gi|221069316|ref|ZP_03545421.1| flagellar hook-associated protein FlgK [Comamonas testosteroni KF-1] gi|220714339|gb|EED69707.1| flagellar hook-associated protein FlgK [Comamonas testosteroni KF-1] Length = 648 Score = 51.8 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 22/51 (43%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 + N+G A +A + L T N++N +T G+ V F G + Sbjct: 1 MSLLNVGARALMANQIALQTTGHNIANVNTAGYSRQSVAFQTSAGQNIGNG 51 Score = 36.8 bits (83), Expect = 3.0, Method: Composition-based stats. Identities = 5/42 (11%), Positives = 15/42 (35%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E +++ Q + + ++ + I+ + Sbjct: 606 MSGVNLDEEAAKLLQYQQSYQASAKMLQVAQGIFDSVIQAVG 647 >gi|332305621|ref|YP_004433472.1| flagellar hook-associated protein FlgK [Glaciecola agarilytica 4H-3-7+YE-5] gi|332172950|gb|AEE22204.1| flagellar hook-associated protein FlgK [Glaciecola agarilytica 4H-3-7+YE-5] Length = 709 Score = 51.8 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 19/130 (14%), Positives = 47/130 (36%), Gaps = 4/130 (3%) Query: 1 MQTS---FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKF-SEVVGAIKNDIDQKI 56 M + +I + A Q LST +N++N +T G+ + F +++ G + +++ Sbjct: 1 MIRTADLVSIARSGVEASNQLLSTTGNNIANVNTDGYVRERTSFVAQLTGGVGQYTTERV 60 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVS 116 + + A+ + + + + ++R T + + Sbjct: 61 MNTFAQNQLRRDTTNLAEHEAYWTKTAVLDNVFASEANSISASMSRFFASLQTANDDPTN 120 Query: 117 ASGKYPVLDM 126 S + VL Sbjct: 121 MSARQLVLGD 130 >gi|238927421|ref|ZP_04659181.1| flagellar basal body rod protein [Selenomonas flueggei ATCC 43531] gi|238884703|gb|EEQ48341.1| flagellar basal body rod protein [Selenomonas flueggei ATCC 43531] Length = 139 Score = 51.8 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 10/46 (21%), Positives = 22/46 (47%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50 ++ A A R +++N++N +T FR V+F +++ Sbjct: 11 IDVSSRALSAANLRHEVLSNNIANVNTPYFRRSHVRFEDLLRKELG 56 >gi|256830790|ref|YP_003159518.1| flagellar basal-body rod protein FlgC [Desulfomicrobium baculatum DSM 4028] gi|256579966|gb|ACU91102.1| flagellar basal-body rod protein FlgC [Desulfomicrobium baculatum DSM 4028] Length = 145 Score = 51.8 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 8/46 (17%), Positives = 21/46 (45%), Gaps = 1/46 (2%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G++ + N + EM M+ + + + + I ++ +A+ I Sbjct: 100 GYVSYPDINVVEEMTNMLSAMRAYEANVSTITTSKSMFSKAL-EIG 144 Score = 43.3 bits (100), Expect = 0.032, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 24/54 (44%), Gaps = 6/54 (11%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIK 49 T+ ++G +A A L+ ++ N++N T G +R +V F E Sbjct: 4 MTAIDVGASALKAERTHLNVISMNLANAKTTRTVDGGPYRRKEVVFKETEVQSP 57 >gi|261344144|ref|ZP_05971788.1| flagellar basal-body rod protein FlgC [Providencia rustigianii DSM 4541] gi|282567736|gb|EFB73271.1| flagellar basal-body rod protein FlgC [Providencia rustigianii DSM 4541] Length = 134 Score = 51.8 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 5/43 (11%), Positives = 22/43 (51%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G+++ N +++ EM I ++ + + +++ + + + + Sbjct: 89 GYVQMPNVDTVGEMINTISASRSYQANLEVMNTAKTLLQKTLT 131 Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 6/47 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFS 42 + F+I +A A QRL+ A NM+N ++V +R +V F Sbjct: 4 LSIFDISASALTAQSQRLNVSASNMANAESVAGPDGQPYRAKQVVFQ 50 >gi|253681928|ref|ZP_04862725.1| flagellar hook-associated protein FlgK [Clostridium botulinum D str. 1873] gi|253561640|gb|EES91092.1| flagellar hook-associated protein FlgK [Clostridium botulinum D str. 1873] Length = 686 Score = 51.8 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 8/39 (20%), Positives = 17/39 (43%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 N+G A + L + N++N++T G+ + Sbjct: 8 LNVGKRGLYAQQGALDVTSHNIANSNTEGYTRQRAIMET 46 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 5/41 (12%), Positives = 15/41 (36%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 S + EM ++ + + +I ++ + I + Sbjct: 644 TSGVSLNEEMANIVQYQHAYQANAKIIATTDQLLDVVINGL 684 >gi|160896081|ref|YP_001561663.1| flagellar basal-body rod protein FlgC [Delftia acidovorans SPH-1] gi|160361665|gb|ABX33278.1| flagellar basal-body rod protein FlgC [Delftia acidovorans SPH-1] Length = 134 Score = 51.8 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 25/43 (58%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ SN +++ EM MI ++ + + +++ + +L+ ++ Sbjct: 89 GYVTHSNVSAVDEMVNMISASRSYQNNVEVMNTTKSLLLKTLQ 131 Score = 40.2 bits (92), Expect = 0.22, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 39/109 (35%), Gaps = 6/109 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQ 54 M + F+I +A A QRL+ VA N++N D V ++ +V F V + Sbjct: 3 MFSIFSISGSAVSAQSQRLNVVASNLANVDAVAGPDGKAYQARQVVFQTVAMGEEGSSGV 62 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103 ++S ++ + + + E I +R Sbjct: 63 RVSAISQDNTPGRRIHDPQHPLADAEGYVTHSNVSAVDEMVNMISASRS 111 >gi|317010250|gb|ADU80830.1| flagellar basal body rod protein FlgC [Helicobacter pylori India7] Length = 161 Score = 51.8 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 8/44 (18%), Positives = 19/44 (43%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 +G++ N N++ EM ++ T+ + + + AI Sbjct: 113 AQGYVAYPNVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAI 156 Score = 39.1 bits (89), Expect = 0.49, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 6/49 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44 +SF+I A R + ++ N++N +T G +R + F Sbjct: 3 LSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFKAF 51 >gi|167626153|ref|YP_001676447.1| flagellar basal-body rod protein FlgC [Shewanella halifaxensis HAW-EB4] gi|167356175|gb|ABZ78788.1| flagellar basal-body rod protein FlgC [Shewanella halifaxensis HAW-EB4] Length = 139 Score = 51.8 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 10/48 (20%), Positives = 27/48 (56%), Gaps = 1/48 (2%) Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 +G++ SN N++ EM M+ ++ F + +++ +SM + + + + Sbjct: 92 QGYVAYSNVNTVEEMADMMAASRSFETNVEIMNRA-RSMQQGLLQLGA 138 Score = 36.0 bits (81), Expect = 4.2, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 6/51 (11%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKND 51 I A A RL+TVA N++N FR +K FS + + Sbjct: 9 IAGAGMNAQTIRLNTVASNLANAGAAAESPDEAFRALKPVFSTIYKQTQEG 59 >gi|221069324|ref|ZP_03545429.1| flagellar basal-body rod protein FlgC [Comamonas testosteroni KF-1] gi|264676568|ref|YP_003276474.1| flagellar basal-body rod protein FlgC [Comamonas testosteroni CNB-2] gi|299531288|ref|ZP_07044698.1| flagellar basal-body rod protein FlgC [Comamonas testosteroni S44] gi|220714347|gb|EED69715.1| flagellar basal-body rod protein FlgC [Comamonas testosteroni KF-1] gi|262207080|gb|ACY31178.1| flagellar basal-body rod protein FlgC [Comamonas testosteroni CNB-2] gi|298720695|gb|EFI61642.1| flagellar basal-body rod protein FlgC [Comamonas testosteroni S44] Length = 134 Score = 51.8 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 25/43 (58%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ SN +++ EM MI ++ + + +++ + +L+ ++ Sbjct: 89 GYVTHSNVSAVDEMVNMISASRSYQNNVEVMNTAKTLLLKTLQ 131 Score = 44.5 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 38/109 (34%), Gaps = 6/109 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQ 54 M + FNI +A A QRL+ VA N++N D V ++ +V F V Sbjct: 3 MFSIFNISGSAVSAQSQRLNVVASNLANVDAVAGPDGSVYKARQVVFQTVPMGNDGSAGV 62 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103 K++ ++ + + + E I +R Sbjct: 63 KVNAISEDNTPGRRIHDPSNPLADGEGYVTHSNVSAVDEMVNMISASRS 111 >gi|255321464|ref|ZP_05362622.1| flagellar basal-body rod protein FlgC [Campylobacter showae RM3277] gi|255301320|gb|EET80579.1| flagellar basal-body rod protein FlgC [Campylobacter showae RM3277] Length = 165 Score = 51.8 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 8/45 (17%), Positives = 19/45 (42%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 G++ N N + EM +I T+ + + + + A+ + Sbjct: 119 GYVAYPNINPVIEMADLIEATRAYQANVSAFQSAKTIAQSALELL 163 Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 11 AQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44 A R++ ++ N++N +TV G +R +V F V Sbjct: 14 GLSAQRFRMNVISSNIANANTVRTAEGGPYRRREVIFKAV 53 >gi|302389655|ref|YP_003825476.1| flagellar basal-body rod protein FlgB [Thermosediminibacter oceani DSM 16646] gi|302200283|gb|ADL07853.1| flagellar basal-body rod protein FlgB [Thermosediminibacter oceani DSM 16646] Length = 136 Score = 51.8 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 30/63 (47%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 A R +A+N++N DT F+ V F E++ + + ++ + ++++S Sbjct: 15 MDAKWMRHEVLANNIANVDTPNFKRSDVVFEELLQKYLKESNSRLPLKTTSEKHISNLKP 74 Query: 72 SFI 74 +F Sbjct: 75 TFD 77 >gi|269792948|ref|YP_003317852.1| flagellar basal-body rod protein FlgC [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100583|gb|ACZ19570.1| flagellar basal-body rod protein FlgC [Thermanaerovibrio acidaminovorans DSM 6589] Length = 139 Score = 51.8 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 9/44 (20%), Positives = 22/44 (50%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 + G++ N N + EM M+ ++ + + T+++ + AI Sbjct: 91 QEGYVAYPNVNVVREMADMMVASRAYEANLTVVETGKAMWNSAI 134 Score = 42.9 bits (99), Expect = 0.041, Method: Composition-based stats. Identities = 12/83 (14%), Positives = 23/83 (27%), Gaps = 6/83 (7%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDIDQKI 56 S ++ +A A + ++ N++N +T G + F E + A D Sbjct: 5 RSVDVAGSALTAHRVWMDAISSNLANVNTTRTPEGGPYVRRVPIFQERLMAAMKDGSTSS 64 Query: 57 SFVASGKEYLSKEVGSFISTGTE 79 E Sbjct: 65 GVKVVAIERDPLPPRMVYQPDHP 87 >gi|255523706|ref|ZP_05390672.1| flagellar basal-body rod protein FlgC [Clostridium carboxidivorans P7] gi|296186710|ref|ZP_06855112.1| flagellar basal-body rod protein FlgC [Clostridium carboxidivorans P7] gi|255512575|gb|EET88849.1| flagellar basal-body rod protein FlgC [Clostridium carboxidivorans P7] gi|296048747|gb|EFG88179.1| flagellar basal-body rod protein FlgC [Clostridium carboxidivorans P7] Length = 144 Score = 51.4 bits (121), Expect = 9e-05, Method: Composition-based stats. Identities = 9/44 (20%), Positives = 20/44 (45%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 +G++ N N + EM M+ T+ + + I + +A+ Sbjct: 97 AQGYVSKPNVNVLNEMADMMVATRAYEANIDAISSEKTMFSKAL 140 Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 9/59 (15%) Query: 1 MQTSFN---IGLAAQLALEQRLSTVADNMSNTDTV-G-----FRTIKVKFSEVVGAIKN 50 M +FN I + A R+ T+A N++N DT G +R F E + N Sbjct: 1 MIKAFNNLRISASGLSAERLRMDTIASNIANVDTTRGANGQPYRRKIAVFQENLNTQLN 59 >gi|229544391|ref|ZP_04433449.1| flagellar basal-body rod protein FlgC [Bacillus coagulans 36D1] gi|229324876|gb|EEN90553.1| flagellar basal-body rod protein FlgC [Bacillus coagulans 36D1] Length = 149 Score = 51.4 bits (121), Expect = 9e-05, Method: Composition-based stats. Identities = 8/46 (17%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G++ N + + EM MI T+ + + T ++ ++ +++ + + Sbjct: 104 GYVTKPNVDLLTEMTGMISATRSYEANVTALNASKAMLMKTL-ELG 148 Score = 44.9 bits (104), Expect = 0.009, Method: Composition-based stats. Identities = 11/32 (34%), Positives = 16/32 (50%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32 M T NI A A R+ ++ N++N DT Sbjct: 3 MFTGMNISSEALSAQRLRMDVISSNIANADTT 34 >gi|103488393|ref|YP_617954.1| flagellar hook-associated protein [Sphingopyxis alaskensis RB2256] gi|98978470|gb|ABF54621.1| Flagellar hook-associated protein [Sphingopyxis alaskensis RB2256] Length = 441 Score = 51.4 bits (121), Expect = 9e-05, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 25/50 (50%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50 M IG + A + LST+ DN++N T G+ +++ E VG + Sbjct: 1 MSDLLGIGYSGLKAYSRALSTIGDNIANAQTPGYARRRLEMMEAVGGGNS 50 >gi|302670715|ref|YP_003830675.1| flagellar basal-body rod protein FlgB [Butyrivibrio proteoclasticus B316] gi|302395188|gb|ADL34093.1| flagellar basal-body rod protein FlgB [Butyrivibrio proteoclasticus B316] Length = 131 Score = 51.4 bits (121), Expect = 9e-05, Method: Composition-based stats. Identities = 12/78 (15%), Positives = 28/78 (35%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A A R +A+N++N DT G++ + F + + + + Sbjct: 16 AADASWLRNEVIANNIANVDTPGYKRQDLNFEDELERALGNSRYVTMDAKVAGLKERELR 75 Query: 71 GSFISTGTELDFALEGDA 88 I+ + + L+ + Sbjct: 76 PRVINDYSNFSYRLDKNN 93 >gi|237751239|ref|ZP_04581719.1| flagellar basal body rod protein FlgC [Helicobacter bilis ATCC 43879] gi|229372605|gb|EEO22996.1| flagellar basal body rod protein FlgC [Helicobacter bilis ATCC 43879] Length = 163 Score = 51.4 bits (121), Expect = 9e-05, Method: Composition-based stats. Identities = 8/45 (17%), Positives = 18/45 (40%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +G++ N N + EM ++ T+ + + + AI Sbjct: 115 AQGYVAYPNVNPVVEMADLVEATRAYQANVAAFQSAKNMASNAIT 159 Score = 41.8 bits (96), Expect = 0.082, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 23/49 (46%), Gaps = 6/49 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44 ++F+I A R++ ++ N++N +T G +R +V F Sbjct: 3 MSTFDISGYGLSAQRVRVNVISANIANANTTRTDEGGPYRRQEVVFRAF 51 >gi|109948140|ref|YP_665368.1| flagellar basal body rod protein FlgC [Helicobacter acinonychis str. Sheeba] gi|109715361|emb|CAK00369.1| flagellar basal-body rod protein [Helicobacter acinonychis str. Sheeba] Length = 161 Score = 51.4 bits (121), Expect = 9e-05, Method: Composition-based stats. Identities = 8/44 (18%), Positives = 19/44 (43%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 +G++ N N++ EM ++ T+ + + + AI Sbjct: 113 AQGYVAYPNVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAI 156 Score = 39.1 bits (89), Expect = 0.51, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 6/49 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44 +SF+I A R + ++ N++N +T G +R + F Sbjct: 3 LSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFKAF 51 >gi|307945654|ref|ZP_07660990.1| flagellar basal-body rod protein FlgC [Roseibium sp. TrichSKD4] gi|307771527|gb|EFO30752.1| flagellar basal-body rod protein FlgC [Roseibium sp. TrichSKD4] Length = 136 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 16/130 (12%), Positives = 36/130 (27%), Gaps = 13/130 (10%) Query: 1 MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKN- 50 M S + + A R+ +A+N++N ++ +R F N Sbjct: 1 MDLIKSLFVAASGLKAQNGRMRVIAENIANANSTAKTPDGEPYRRRVPTFQSHFSKELNA 60 Query: 51 ---DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFK 107 ++ + ++ KE + G L+ + A + Sbjct: 61 EVVELGKVAEDKSAFKERYQPGHPAANEQGYVLEPNVNTLIETADMREAQRSYEANLNVI 120 Query: 108 VTDDGSLVSA 117 + L Sbjct: 121 QSSRRMLQRT 130 Score = 48.7 bits (114), Expect = 7e-04, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 20/43 (46%) Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 +G++ + N N++ E M + + + +I + + + I Sbjct: 89 QGYVLEPNVNTLIETADMREAQRSYEANLNVIQSSRRMLQRTI 131 >gi|226225705|ref|YP_002759811.1| flagellar hook-associated protein 1 [Gemmatimonas aurantiaca T-27] gi|226088896|dbj|BAH37341.1| flagellar hook-associated protein 1 [Gemmatimonas aurantiaca T-27] Length = 482 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 7/38 (18%), Positives = 17/38 (44%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S N+ E+ M+ + Q + + +I ++ + I Sbjct: 443 SGVNTDEELVNMLRVQQSYQAAAKMITAADEMLKTLIN 480 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 13/94 (13%), Positives = 32/94 (34%), Gaps = 4/94 (4%) Query: 1 MQTSFN-IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFV 59 M + I +A L+ + L T++ N++N +T GF + + + Sbjct: 1 MGSGLFSIARSALLSHQTALQTISHNVANAETPGFSRQEAV---LAANTPVRLYNGNVGT 57 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALE 93 + ++ + L G++ + Sbjct: 58 GVHVATIQRKRDLLLDDNYRSANVLAGNSTMRRD 91 >gi|223040442|ref|ZP_03610716.1| flagellar basal-body rod protein FlgC [Campylobacter rectus RM3267] gi|222878292|gb|EEF13399.1| flagellar basal-body rod protein FlgC [Campylobacter rectus RM3267] Length = 165 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 8/45 (17%), Positives = 19/45 (42%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 G++ N N + EM +I T+ + + + + A+ + Sbjct: 119 GYVAYPNINPVIEMADLIEATRAYQANVSAFQSAKTIAQSALELL 163 Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 11 AQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44 A R++ ++ N++N +TV G +R +V F V Sbjct: 14 GLSAQRFRMNVISSNIANANTVRTAEGGPYRRREVIFKAV 53 >gi|83594157|ref|YP_427909.1| flagellar basal body rod protein FlgC [Rhodospirillum rubrum ATCC 11170] gi|83577071|gb|ABC23622.1| Flagellar basal-body rod protein FlgC [Rhodospirillum rubrum ATCC 11170] Length = 137 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 16/127 (12%), Positives = 36/127 (28%) Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 A+ I + +GE + +V+ + ++ VR Sbjct: 11 ATSGLKAQTERLRTIAQNMANADSMAERQGEDPYRRRVVTFKSVMDREVGAEMVRTGRVR 70 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + + G++ N N M EM M + + + +I + Sbjct: 71 EDMSAFTRKYDPSHPGADAEGYVLAPNVNPMVEMMDMREAQRSYEANLNVITATREMTRN 130 Query: 237 AIRNIAS 243 + + S Sbjct: 131 TLELLRS 137 Score = 39.1 bits (89), Expect = 0.50, Method: Composition-based stats. Identities = 18/111 (16%), Positives = 33/111 (29%), Gaps = 11/111 (9%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVV----GAIKNDIDQK 55 I + A +RL T+A NM+N D++ +R V F V+ GA + Sbjct: 10 IATSGLKAQTERLRTIAQNMANADSMAERQGEDPYRRRVVTFKSVMDREVGAEMVRTGRV 69 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106 +++ + G L + + Sbjct: 70 REDMSAFTRKYDPSHPGADAEGYVLAPNVNPMVEMMDMREAQRSYEANLNV 120 >gi|183598615|ref|ZP_02960108.1| hypothetical protein PROSTU_02015 [Providencia stuartii ATCC 25827] gi|188020794|gb|EDU58834.1| hypothetical protein PROSTU_02015 [Providencia stuartii ATCC 25827] Length = 134 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 5/43 (11%), Positives = 20/43 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N + + EM I ++ + + +++ + + + + Sbjct: 89 GYVRMPNVDMVGEMINTISASRSYQANLEVMNTAKTLLQKTLT 131 Score = 39.5 bits (90), Expect = 0.40, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 39/121 (32%), Gaps = 6/121 (4%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSEVVGAIKNDIDQK 55 + F+I +A A QRL+ A NM+N VG FR +V F + Sbjct: 4 LSIFDISASALTAQSQRLNVSASNMANAESVVGPDGEPFRAKQVVFQMTPQGRNGVGGVR 63 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115 +S + E E + + E I +R + + + Sbjct: 64 VSQLIEDPTPPRMEYKPGHPLADEKGYVRMPNVDMVGEMINTISASRSYQANLEVMNTAK 123 Query: 116 S 116 + Sbjct: 124 T 124 >gi|157738153|ref|YP_001490837.1| flagellar basal body rod protein FlgC [Arcobacter butzleri RM4018] gi|157700007|gb|ABV68167.1| flagellar basal body rod protein FlgC [Arcobacter butzleri RM4018] Length = 154 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 6/53 (11%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKN 50 +N+ + A R++ V+ N++N T G ++ +V F +V+ A N Sbjct: 6 GYNVATSGMSAQRTRINVVSANIANAKTTHTAEGGPYKKQEVVFEDVLVANTN 58 Score = 42.5 bits (98), Expect = 0.056, Method: Composition-based stats. Identities = 7/47 (14%), Positives = 20/47 (42%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G++ + N + EM +I + + + T + + + + + S Sbjct: 108 GYVAYPDINPVIEMVNLIEAMRSYEANVTSFNTHRGIDSKTLEILNS 154 >gi|229826300|ref|ZP_04452369.1| hypothetical protein GCWU000182_01672 [Abiotrophia defectiva ATCC 49176] gi|229789170|gb|EEP25284.1| hypothetical protein GCWU000182_01672 [Abiotrophia defectiva ATCC 49176] Length = 147 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 23/42 (54%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N N++ EM MI T+ + + T + + +L+A+ Sbjct: 100 GYVTYPNVNTVQEMTDMIDATRSYEANVTAFNATKNMILKAL 141 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 6/46 (13%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43 + +I A + R +A N++N +T G +R V F+E Sbjct: 6 AMDISATGMTAQQLRTDVIAQNIANINTTRDQNGNVYRRKNVVFTE 51 >gi|302390139|ref|YP_003825960.1| flagellar hook-associated protein FlgK [Thermosediminibacter oceani DSM 16646] gi|302200767|gb|ADL08337.1| flagellar hook-associated protein FlgK [Thermosediminibacter oceani DSM 16646] Length = 465 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 24/68 (35%), Gaps = 3/68 (4%) Query: 1 MQTSFN---IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS 57 M +SF I A A ++ V+ N++N +T G+ + + Sbjct: 1 MYSSFFGIEIAKRALFAQQRAQENVSHNVANANTPGYSRQRPVMEATYTKPWAGMYTAAG 60 Query: 58 FVASGKEY 65 V +G Sbjct: 61 AVQAGTGV 68 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 7/41 (17%), Positives = 18/41 (43%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S+ + EM +MI +N+ +I ++ + + + Sbjct: 421 SSVSLDEEMSRMIMYQHAYNAAARMITAIDEMLDTIVSRMG 461 >gi|237731005|ref|ZP_04561486.1| flagellar basal body rod protein FlgC [Citrobacter sp. 30_2] gi|226906544|gb|EEH92462.1| flagellar basal body rod protein FlgC [Citrobacter sp. 30_2] Length = 134 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 6/43 (13%), Positives = 22/43 (51%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G+++ N + + EM + ++ + + +++ + ML+ + Sbjct: 89 GYVKMPNVDVVGEMVNTMSASRSYQANVEVLNTVKSLMLKTLT 131 Score = 37.5 bits (85), Expect = 1.7, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 6/47 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFS 42 F+I +A A +RL+ A NM+N D+V +R +V F Sbjct: 4 LNIFDIAGSALTAQSKRLNVAASNMANADSVSGPDGQPYRAKQVVFQ 50 >gi|254524155|ref|ZP_05136210.1| flagellar hook-associated protein FlgK [Stenotrophomonas sp. SKA14] gi|219721746|gb|EED40271.1| flagellar hook-associated protein FlgK [Stenotrophomonas sp. SKA14] Length = 626 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 25/50 (50%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50 M + + G A LA ++ L+T + N++N +T G+ KV F+ Sbjct: 1 MSSVLSTGTGALLAFQRALATTSHNVANLNTPGYSRQKVNFATADPQNYG 50 Score = 41.8 bits (96), Expect = 0.077, Method: Composition-based stats. Identities = 9/39 (23%), Positives = 15/39 (38%) Query: 200 EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 E S N E M+ L Q + + + LI + + Sbjct: 583 EVSGVNLDEEAADMLRLQQAYQAASQLISTADSMFQTIL 621 >gi|329890330|ref|ZP_08268673.1| flagellar hook-associated protein FlgK [Brevundimonas diminuta ATCC 11568] gi|328845631|gb|EGF95195.1| flagellar hook-associated protein FlgK [Brevundimonas diminuta ATCC 11568] Length = 735 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 19/42 (45%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 + NI + A + +L V+DN+SN +T G+ Sbjct: 4 NSIMNIATSGMNAAQTQLRVVSDNVSNVNTPGYVRKIADQQS 45 Score = 36.4 bits (82), Expect = 4.0, Method: Composition-based stats. Identities = 6/30 (20%), Positives = 11/30 (36%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 N E+ M Q FN+ ++ + Sbjct: 697 VNLDEELVLMTTYQQAFNASARMVQAAKDM 726 >gi|315636296|ref|ZP_07891546.1| flagellar basal-body rod protein FlgC [Arcobacter butzleri JV22] gi|315479385|gb|EFU70068.1| flagellar basal-body rod protein FlgC [Arcobacter butzleri JV22] Length = 154 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 6/53 (11%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKN 50 +N+ + A R++ V+ N++N T G ++ +V F +V+ A N Sbjct: 6 GYNVATSGMSAQRTRINVVSANIANAKTTHTAEGGPYKKQEVVFEDVLVANTN 58 Score = 42.2 bits (97), Expect = 0.058, Method: Composition-based stats. Identities = 7/47 (14%), Positives = 20/47 (42%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G++ + N + EM +I + + + T + + + + + S Sbjct: 108 GYVAYPDINPVIEMVNLIEAMRSYEANVTSFNTHRGIDSKTLEILNS 154 >gi|99082804|ref|YP_614958.1| flagellar basal body rod protein FlgC [Ruegeria sp. TM1040] gi|99039084|gb|ABF65696.1| Flagellar basal-body rod protein flgC [Ruegeria sp. TM1040] Length = 130 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 23/42 (54%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44 S ++ + A RL+ V++N+SN DT G+R V F V Sbjct: 6 KSLSVTASGLRAQAARLTHVSENISNADTPGYRRKTVSFQSV 47 Score = 44.1 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 7/37 (18%), Positives = 15/37 (40%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 G E SN + M E+ + + + + D+ + Sbjct: 84 GHYEGSNVDLMIEIADAREAQRTYEANLKMFDQTRQM 120 >gi|308185345|ref|YP_003929478.1| flagellar basal body rod protein FlgC [Helicobacter pylori SJM180] gi|308061265|gb|ADO03161.1| flagellar basal body rod protein FlgC [Helicobacter pylori SJM180] Length = 161 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 8/44 (18%), Positives = 19/44 (43%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 +G++ N N++ EM ++ T+ + + + AI Sbjct: 113 AQGYVAYPNVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAI 156 Score = 39.5 bits (90), Expect = 0.40, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 6/49 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44 +SF+I A R + ++ N++N +T G +R + F Sbjct: 3 LSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFRAF 51 >gi|308173581|ref|YP_003920286.1| flagellar component of cell-proximal portion of basal-body rod [Bacillus amyloliquefaciens DSM 7] gi|307606445|emb|CBI42816.1| flagellar component of cell-proximal portion of basal-body rod [Bacillus amyloliquefaciens DSM 7] gi|328553487|gb|AEB23979.1| flagellar basal body rod protein FlgC [Bacillus amyloliquefaciens TA208] gi|328911722|gb|AEB63318.1| flagellar component of cell-proximal portion of basal-body rod [Bacillus amyloliquefaciens LL3] Length = 150 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 17/112 (15%), Positives = 44/112 (39%), Gaps = 4/112 (3%) Query: 131 IQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS 190 +P + ++ ++ GE G+ S + N+ P + Sbjct: 42 EWVPYRRKLVSLQSGGESFSSLLNSKMNGIGSAGNGVKVSAVTEDPSAFNLVYDPENPDA 101 Query: 191 GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 K G+++ N + + EM ++ T+ + + T ++ ++ +L+A+ I Sbjct: 102 N---KDGYVQKPNVDPLKEMVDLVSSTRSYEANVTALNASKGMLLKAL-EIG 149 Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 36/114 (31%), Gaps = 17/114 (14%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV------G----FRTIKV-------KFSEVV 45 S NI +A A R+ V+ N++N DT G +R V FS ++ Sbjct: 5 QSLNISGSALTAQRVRMDVVSSNLANMDTTRAKQVNGEWVPYRRKLVSLQSGGESFSSLL 64 Query: 46 GAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 + N I + V + + D +G P + Sbjct: 65 NSKMNGIGSAGNGVKVSAVTEDPSAFNLVYDPENPDANKDGYVQKPNVDPLKEM 118 >gi|297380732|gb|ADI35619.1| flagellar basal-body rod protein FlgC [Helicobacter pylori v225d] Length = 161 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 8/44 (18%), Positives = 19/44 (43%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 +G++ N N++ EM ++ T+ + + + AI Sbjct: 113 AQGYVAYPNVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAI 156 Score = 39.1 bits (89), Expect = 0.53, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 6/49 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44 +SF+I A R + ++ N++N +T G +R + F Sbjct: 3 LSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFKAF 51 >gi|261838846|gb|ACX98612.1| flagellar basal-body rod protein [Helicobacter pylori 51] Length = 161 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 8/44 (18%), Positives = 19/44 (43%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 +G++ N N++ EM ++ T+ + + + AI Sbjct: 113 AQGYVAYPNVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAI 156 Score = 39.1 bits (89), Expect = 0.53, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 6/49 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44 +SF+I A R + ++ N++N +T G +R + F Sbjct: 3 LSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFKAF 51 >gi|261407986|ref|YP_003244227.1| flagellar basal-body rod protein FlgC [Paenibacillus sp. Y412MC10] gi|329929277|ref|ZP_08283030.1| flagellar basal-body rod protein FlgC [Paenibacillus sp. HGF5] gi|261284449|gb|ACX66420.1| flagellar basal-body rod protein FlgC [Paenibacillus sp. Y412MC10] gi|328936646|gb|EGG33089.1| flagellar basal-body rod protein FlgC [Paenibacillus sp. HGF5] Length = 149 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 23/42 (54%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N + EM M+ T+ + + T I+ ++ +++A+ Sbjct: 104 GYVFMPNVDITKEMVDMLAATRSYEANVTAINASKAMIMKAL 145 Score = 41.4 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 19/113 (16%), Positives = 35/113 (30%), Gaps = 16/113 (14%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV------G----FRTIKVKFS------EVVG 46 SF I +A A R+ ++ N++N +T G +R V F E + Sbjct: 5 NSFGINASALTAQRLRMDVISSNIANAETTRARIENGQAVPYRRKTVVFQPQQESFEGLL 64 Query: 47 AIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 + + V + + + T D EG + + Sbjct: 65 RAQMNGQNAGQGVKVAQVREDQSPLKQVYNPTHPDANAEGYVFMPNVDITKEM 117 >gi|146296277|ref|YP_001180048.1| flagellar basal-body rod protein FlgB [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145409853|gb|ABP66857.1| flagellar basal-body rod protein FlgB [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 137 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 10/61 (16%), Positives = 26/61 (42%) Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76 +R +++N++N DT G++ + F + A ND + + +++ + Sbjct: 20 KRNEVISNNIANADTPGYKAKDLNFKAFLQAYLNDQNNLELITTDKRHIKAEQSSGTSTK 79 Query: 77 G 77 Sbjct: 80 D 80 >gi|308064340|gb|ADO06227.1| flagellar basal body rod protein FlgC [Helicobacter pylori Sat464] Length = 161 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 8/44 (18%), Positives = 19/44 (43%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 +G++ N N++ EM ++ T+ + + + AI Sbjct: 113 AQGYVAYPNVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAI 156 Score = 39.1 bits (89), Expect = 0.55, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 6/49 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44 +SF+I A R + ++ N++N +T G +R + F Sbjct: 3 LSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFKAF 51 >gi|144900468|emb|CAM77332.1| Flagellar basal-body rod protein FlgC [Magnetospirillum gryphiswaldense MSR-1] Length = 137 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 7/46 (15%), Positives = 20/46 (43%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G++ N N + EM M + + + +I+ + + + + + Sbjct: 91 GYVLAPNVNPLIEMMDMREAQRSYEANMNVINSSRQLLSRTVEMLR 136 Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 27/83 (32%), Gaps = 9/83 (10%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTD--------TVGFRTIKVKFSEVVGAIKNDID 53 Q + I ++ A +RL +++N++N D T ++ V F + Sbjct: 5 QKASKIAISGMKAQSERLRVISENLANADSLARTPDGTP-YKRKVVTFKSELDRANGYTG 63 Query: 54 QKISFVASGKEYLSKEVGSFIST 76 K+ V + Sbjct: 64 VKVDKVRPDASEFQRRYDPKHPA 86 >gi|118444348|ref|YP_877945.1| flagellar hook-associated protein 1 [Clostridium novyi NT] gi|118134804|gb|ABK61848.1| flagellar hook-associated protein 1 [Clostridium novyi NT] Length = 676 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 11/90 (12%), Positives = 32/90 (35%), Gaps = 4/90 (4%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV----VGAIKNDIDQKISF 58 ++ N+G A + L + N++N++T G+ + + ++ N + Sbjct: 6 STLNVGKRGLYAQQGALDVTSHNIANSNTKGYTRQRALMETTRPFGMPSMDNQVGPGQIG 65 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDA 88 + + +F+ + + G Sbjct: 66 TGVEISKIQRVRDTFMDYQVRRETSTLGQY 95 Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 5/40 (12%), Positives = 15/40 (37%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 S + EM ++ + + +I ++ + I + Sbjct: 635 SGVSLNEEMANIVQYQHAYQANAKIIATTDQLLDVVINGL 674 >gi|310816827|ref|YP_003964791.1| flagellar basal-body rod protein FlgC [Ketogulonicigenium vulgare Y25] gi|308755562|gb|ADO43491.1| flagellar basal-body rod protein FlgC [Ketogulonicigenium vulgare Y25] Length = 127 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 10/39 (25%), Positives = 18/39 (46%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 +I + A R+ ++N++N DT G+ V F Sbjct: 8 LSIAASGMQAQASRMRFTSENIANADTPGYHRKLVSFRA 46 Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats. Identities = 5/47 (10%), Positives = 18/47 (38%) Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 +G SN + + E+ ++ + + + D+ + + + Sbjct: 80 QGNYSGSNVDLLIEIADAREASRSYEANLKVFDQVRQMSTSLLDLLR 126 >gi|283833632|ref|ZP_06353373.1| flagellar basal-body rod protein FlgC [Citrobacter youngae ATCC 29220] gi|291071315|gb|EFE09424.1| flagellar basal-body rod protein FlgC [Citrobacter youngae ATCC 29220] Length = 134 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 6/43 (13%), Positives = 22/43 (51%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G+++ N + + EM + ++ + + +++ + ML+ + Sbjct: 89 GYVKMPNVDVVGEMVNTMSASRSYQANVEVLNTVKSLMLKTLT 131 Score = 38.3 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 6/47 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42 F+I +A A +RL+ A NM+N G +R +V F Sbjct: 4 LNIFDIAGSALTAQSKRLNVAASNMANADSVTGPDGQPYRAKQVVFQ 50 >gi|259417635|ref|ZP_05741554.1| flagellar basal-body rod protein FlgC [Silicibacter sp. TrichCH4B] gi|259346541|gb|EEW58355.1| flagellar basal-body rod protein FlgC [Silicibacter sp. TrichCH4B] Length = 130 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 23/42 (54%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44 S ++ + A RL+ V++N+SN DT G+R V F V Sbjct: 6 KSLSVTASGLRAQAARLTHVSENISNADTPGYRRKTVSFQAV 47 Score = 44.1 bits (102), Expect = 0.017, Method: Composition-based stats. Identities = 7/37 (18%), Positives = 15/37 (40%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 G E SN + M E+ + + + + D+ + Sbjct: 84 GHYEGSNVDLMIEIADAREAQRTYEANLKMFDQTRQM 120 >gi|255654320|ref|ZP_05399729.1| putative flagellar hook-associated protein [Clostridium difficile QCD-23m63] Length = 315 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 6/40 (15%), Positives = 17/40 (42%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 S + EM ++I + + + + ++ + + I I Sbjct: 275 SGVSLDEEMTELIKIQRSYQASAKVMSTAVQLLDVVINGI 314 >gi|312884828|ref|ZP_07744520.1| flagellar hook-associated protein FlgK [Vibrio caribbenthicus ATCC BAA-2122] gi|309367480|gb|EFP95040.1| flagellar hook-associated protein FlgK [Vibrio caribbenthicus ATCC BAA-2122] Length = 457 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 39/128 (30%), Gaps = 1/128 (0%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 NIGL A L A N++N +T G+ + + VG K+D + V Sbjct: 1 MNLVNIGLTGLNASRVALDVTAQNVANINTPGYSRQQALMAS-VGGPKHDKLSAGAGVEV 59 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 + T A + + S L DG T +A Sbjct: 60 PSIRRISDEFLVKQTWQTNSIASYAERYTTNFSQLENTLKADGFSISTGLDKFFNALNDA 119 Query: 122 PVLDMASV 129 V ++ Sbjct: 120 SVTPDSTP 127 >gi|210135737|ref|YP_002302176.1| flagellar basal body rod protein FlgC [Helicobacter pylori P12] gi|210133705|gb|ACJ08696.1| flagellar basal-body rod protein FlgC [Helicobacter pylori P12] Length = 161 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 8/44 (18%), Positives = 19/44 (43%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 +G++ N N++ EM ++ T+ + + + AI Sbjct: 113 AQGYVAYPNVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAI 156 Score = 39.1 bits (89), Expect = 0.56, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 6/49 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44 +SF+I A R + ++ N++N +T G +R + F Sbjct: 3 LSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFKAF 51 >gi|217059|dbj|BAA02862.1| FlgC [Salmonella enterica subsp. enterica serovar Typhimurium] gi|581758|emb|CAA36310.1| unnamed protein product [Salmonella enterica subsp. enterica serovar Typhimurium] Length = 134 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 6/43 (13%), Positives = 22/43 (51%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G+++ N + + EM + ++ + + +++ + ML+ + Sbjct: 89 GYVKMPNVDVVGEMVNTMSASRTYQANIEVLNTVKSMMLKTLT 131 Score = 38.3 bits (87), Expect = 0.91, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 6/47 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42 F+I +A A +RL+ A N++N G +R +V F Sbjct: 4 LNIFDIAGSALAAQSKRLNVAASNLANADSVTGPDGQPYRAKQVVFQ 50 >gi|307747446|gb|ADN90716.1| Flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp. jejuni M1] Length = 164 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 8/46 (17%), Positives = 19/46 (41%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G++ N N + EM +I T+ + + + + A+ + Sbjct: 118 GYVAYPNVNPVIEMADLIEATRAYQANVSAFTSAKTIAQSAVDLLR 163 Score = 43.3 bits (100), Expect = 0.031, Method: Composition-based stats. Identities = 9/39 (23%), Positives = 18/39 (46%), Gaps = 6/39 (15%) Query: 11 AQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43 A R++ ++ N++N +T G +R +V F Sbjct: 13 GLSAQRFRMNVISSNIANANTTRTAEGGPYRRREVIFKA 51 >gi|260222474|emb|CBA32074.1| hypothetical protein Csp_D30300 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 656 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 21/51 (41%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 + NIG A A + L T +N++N +T G+ V V G Sbjct: 1 MSILNIGTRALQANQIALQTAGNNIANVNTPGYSRQNVVLKAVEGQFSGGG 51 Score = 42.9 bits (99), Expect = 0.041, Method: Composition-based stats. Identities = 7/41 (17%), Positives = 15/41 (36%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E ++I Q + + +I + I+ + Sbjct: 615 SGVNLDEEAAKLIQFQQAYQASAKMIQIAQNIFDTLIQGLG 655 >gi|296135666|ref|YP_003642908.1| flagellar hook-associated protein FlgK [Thiomonas intermedia K12] gi|295795788|gb|ADG30578.1| flagellar hook-associated protein FlgK [Thiomonas intermedia K12] Length = 667 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 9/47 (19%), Positives = 18/47 (38%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51 N L A + L +N++N +T G+ S + ++ Sbjct: 8 LNNALTGLQAAQSALQVTGNNIANVNTPGYSRETAVQSTLTPSLYGG 54 >gi|150390490|ref|YP_001320539.1| flagellar basal-body rod protein FlgB [Alkaliphilus metalliredigens QYMF] gi|149950352|gb|ABR48880.1| flagellar basal-body rod protein FlgB [Alkaliphilus metalliredigens QYMF] Length = 136 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 10/55 (18%), Positives = 21/55 (38%), Gaps = 4/55 (7%) Query: 1 MQTSFNIGL----AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51 M + +A A R +++N++N +T F+ V+F + Sbjct: 1 MTNGLYSNINLLNSAMSASWVRNEAISNNIANANTPNFKKSTVEFETHLKNALQG 55 >gi|88813660|ref|ZP_01128889.1| hypothetical protein NB231_05371 [Nitrococcus mobilis Nb-231] gi|88789078|gb|EAR20216.1| hypothetical protein NB231_05371 [Nitrococcus mobilis Nb-231] Length = 652 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 12/83 (14%), Positives = 29/83 (34%), Gaps = 3/83 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M F+ ++ LA ++ ++T A N++N +T G+ + E+ + Sbjct: 1 MGDLFDNSISGLLAFQRAINTTAHNIANVNTAGYSRQRT---ELTARAPTEFGNGFVGNG 57 Query: 61 SGKEYLSKEVGSFISTGTELDFA 83 ++ + A Sbjct: 58 VQAASTNRLFNQTRQVAVQTSSA 80 >gi|291280513|ref|YP_003497348.1| flagellar hook-associated protein 1 FlgK [Deferribacter desulfuricans SSM1] gi|290755215|dbj|BAI81592.1| flagellar hook-associated protein 1 FlgK [Deferribacter desulfuricans SSM1] Length = 584 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 4/40 (10%), Positives = 13/40 (32%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 + E +I + + + I ++ + I + Sbjct: 542 VSLDEEFTNLIKFQKAYEANARFITAVDEMLDRLINGTGT 581 Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 6/39 (15%), Positives = 17/39 (43%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 F G++ + + + N++N +T G+ ++ Sbjct: 8 FQTGVSGLMVSQAGIDVTGHNIANVNTEGYSRQRLSIET 46 >gi|238793996|ref|ZP_04637614.1| Flagellar basal-body rod protein flgC [Yersinia intermedia ATCC 29909] gi|238726628|gb|EEQ18164.1| Flagellar basal-body rod protein flgC [Yersinia intermedia ATCC 29909] Length = 134 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 20/43 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N + EM I ++ + + +++ + ML+ + Sbjct: 89 GYVRMPNVDVTGEMINTISASRSYQANVEVLNTTKSLMLKTLT 131 Score = 38.3 bits (87), Expect = 1.0, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 26/80 (32%), Gaps = 6/80 (7%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSEVVGAIKNDIDQK 55 F+I +A A QRL+ A NM+N G +R +V F + + Sbjct: 4 LNIFDIAGSALSAQSQRLNVSASNMANADSVTGPDGQPYRAKQVVFQVAAQPGQETGGVR 63 Query: 56 ISFVASGKEYLSKEVGSFIS 75 +S + Sbjct: 64 VSQIVDDPAPDRLVYQPGNP 83 >gi|15612531|ref|NP_224184.1| flagellar basal body rod protein FlgC [Helicobacter pylori J99] gi|4156087|gb|AAD07040.1| FLAGELLAR BASAL-BODY ROD PROTEIN [Helicobacter pylori J99] Length = 161 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 8/44 (18%), Positives = 19/44 (43%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 +G++ N N++ EM ++ T+ + + + AI Sbjct: 113 AQGYVAYPNVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAI 156 Score = 39.5 bits (90), Expect = 0.43, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 6/49 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44 +SF+I A R + ++ N++N +T G +R + F Sbjct: 3 LSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFRAF 51 >gi|300854206|ref|YP_003779190.1| flagellar basal-body rod protein FlgC [Clostridium ljungdahlii DSM 13528] gi|300434321|gb|ADK14088.1| flagellar basal-body rod protein FlgC [Clostridium ljungdahlii DSM 13528] Length = 143 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 9/44 (20%), Positives = 21/44 (47%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N N + EM M+ T+ + + + I+ + +A+ Sbjct: 96 ASGYVSMPNVNILNEMADMMVATRAYEANLSAINSEKSMFSKAL 139 Score = 42.2 bits (97), Expect = 0.069, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 28/88 (31%), Gaps = 9/88 (10%) Query: 1 MQTSFNI---GLAAQLALEQRLSTVADNMSNTDTV-G-----FRTIKVKFSEVVGAIKND 51 M +FN + A + T+A NM+N +T G +R F E + + Sbjct: 1 MIQAFNTMRISASGLSAERLSMDTIASNMANAETTRGADGQPYRRKVAVFGENLSKALDS 60 Query: 52 IDQKISFVASGKEYLSKEVGSFISTGTE 79 K K+ S + Sbjct: 61 NGNYGDVPEGVKVVAIKDDTSPFKREYD 88 >gi|262396029|ref|YP_003287882.1| flagellar hook-associated protein FlgK [Vibrio sp. Ex25] gi|262339623|gb|ACY53417.1| flagellar hook-associated protein FlgK [Vibrio sp. Ex25] Length = 457 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 27/88 (30%), Gaps = 1/88 (1%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 NI L+ A L A N++N +TVG+ + + V N + V Sbjct: 1 MNLVNIALSGLGANRVALDVTAQNVANVNTVGYSRQQALMASVDDGKANRLSP-GLGVEV 59 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAW 89 + T + A + Sbjct: 60 TSIRRVTDQFLIKQTWSTNSMAAYASGY 87 >gi|170725961|ref|YP_001759987.1| flagellar hook-associated protein FlgK [Shewanella woodyi ATCC 51908] gi|169811308|gb|ACA85892.1| flagellar hook-associated protein FlgK [Shewanella woodyi ATCC 51908] Length = 637 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 11/51 (21%), Positives = 22/51 (43%), Gaps = 1/51 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51 M NI LA + +L+ ++N++N +T G+ + S + Sbjct: 3 MD-LLNIARTGVLASQSQLAVTSNNIANANTQGYHRQVAEQSSLDNQRLGG 52 Score = 37.2 bits (84), Expect = 2.2, Method: Composition-based stats. Identities = 6/41 (14%), Positives = 14/41 (34%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E G +I Q + + ++ + ++ Sbjct: 597 SGVNLDEEAGNLIRFQQAYQASARIMTTASEIFDTLFSSVR 637 >gi|188589591|ref|YP_001920169.1| flagellar hook-associated protein FlgK [Clostridium botulinum E3 str. Alaska E43] gi|251779172|ref|ZP_04822092.1| flagellar hook-associated protein FlgK [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|188499872|gb|ACD53008.1| flagellar hook-associated protein FlgK [Clostridium botulinum E3 str. Alaska E43] gi|243083487|gb|EES49377.1| flagellar hook-associated protein FlgK [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 604 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 8/48 (16%), Positives = 18/48 (37%), Gaps = 5/48 (10%) Query: 199 LED-----SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 LE S + EM +I +++ +I ++ + I + Sbjct: 555 LEMQRLSVSGVSLDEEMTNLIQFQHAYSANAKVISTVDELLDVVINGL 602 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 7/34 (20%), Positives = 16/34 (47%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 + + ++T + N++N +TVGF + Sbjct: 10 VAKRGLNVQQGAINTTSHNIANANTVGFSRQRAV 43 >gi|146281777|ref|YP_001171930.1| flagellar hook-associated protein FlgK [Pseudomonas stutzeri A1501] gi|145569982|gb|ABP79088.1| flagellar hook-associated protein FlgK [Pseudomonas stutzeri A1501] Length = 669 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 22/40 (55%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 M + +IGL+ A + L+T +N++N DT G+ V Sbjct: 1 MASLISIGLSGLSASQTALATTGNNIANVDTAGYSRQSVV 40 Score = 38.3 bits (87), Expect = 0.84, Method: Composition-based stats. Identities = 7/40 (17%), Positives = 14/40 (35%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 S N E +I Q + + +I ++ I + Sbjct: 630 SGVNLDEEAANLIKFQQYYTAAAQVIKAAQQMFDTIINTL 669 >gi|158320510|ref|YP_001513017.1| flagellar basal-body rod protein FlgC [Alkaliphilus oremlandii OhILAs] gi|158140709|gb|ABW19021.1| flagellar basal-body rod protein FlgC [Alkaliphilus oremlandii OhILAs] Length = 147 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 22/42 (52%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G+++ N + M EM MI ++ + + T ++ + L+ + Sbjct: 102 GYVKMPNVDIMTEMANMISASRAYEANITAMNGTKSMFLKTL 143 Score = 43.3 bits (100), Expect = 0.030, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 18/47 (38%), Gaps = 6/47 (12%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43 S NI + A R+ N++N +T G +R V F Sbjct: 5 NSLNISASGLTAERLRMDIATKNIANANTTRTSNGTPYRRQVVVFKT 51 >gi|28869138|ref|NP_791757.1| flagellar basal-body rod protein FlgC [Pseudomonas syringae pv. tomato str. DC3000] gi|66046709|ref|YP_236550.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv. syringae B728a] gi|71737330|ref|YP_275565.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv. phaseolicola 1448A] gi|213967584|ref|ZP_03395732.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv. tomato T1] gi|237799204|ref|ZP_04587665.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv. oryzae str. 1_6] gi|237806223|ref|ZP_04592927.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv. oryzae str. 1_6] gi|257484951|ref|ZP_05638992.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289627761|ref|ZP_06460715.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289651649|ref|ZP_06482992.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv. aesculi str. 2250] gi|298487859|ref|ZP_07005899.1| Flagellar basal-body rod protein flgC [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|301385711|ref|ZP_07234129.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv. tomato Max13] gi|302060077|ref|ZP_07251618.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv. tomato K40] gi|302134836|ref|ZP_07260826.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv. tomato NCPPB 1108] gi|302185585|ref|ZP_07262258.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv. syringae 642] gi|28852378|gb|AAO55452.1| flagellar basal-body rod protein FlgC [Pseudomonas syringae pv. tomato str. DC3000] gi|63257416|gb|AAY38512.1| Flagellar basal-body rod protein FlgC [Pseudomonas syringae pv. syringae B728a] gi|71557883|gb|AAZ37094.1| flagellar basal-body rod protein FlgC [Pseudomonas syringae pv. phaseolicola 1448A] gi|213927885|gb|EEB61432.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv. tomato T1] gi|298157584|gb|EFH98664.1| Flagellar basal-body rod protein flgC [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320325091|gb|EFW81160.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv. glycinea str. B076] gi|320329350|gb|EFW85343.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv. glycinea str. race 4] gi|330866420|gb|EGH01129.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330875981|gb|EGH10130.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330880520|gb|EGH14669.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv. glycinea str. race 4] gi|330889087|gb|EGH21748.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv. mori str. 301020] gi|330899399|gb|EGH30818.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv. japonica str. M301072PT] gi|330943205|gb|EGH45612.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv. pisi str. 1704B] gi|330953719|gb|EGH53979.1| flagellar basal body rod protein FlgC [Pseudomonas syringae Cit 7] gi|330961194|gb|EGH61454.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv. maculicola str. ES4326] gi|330967088|gb|EGH67348.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv. actinidiae str. M302091] gi|330972411|gb|EGH72477.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv. aceris str. M302273PT] gi|330975974|gb|EGH76040.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv. aptata str. DSM 50252] gi|330986466|gb|EGH84569.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv. lachrymans str. M301315] gi|331011040|gb|EGH91096.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331017028|gb|EGH97084.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv. lachrymans str. M302278PT] gi|331022059|gb|EGI02116.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv. oryzae str. 1_6] gi|331027336|gb|EGI07391.1| flagellar basal body rod protein FlgC [Pseudomonas syringae pv. oryzae str. 1_6] Length = 146 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 30/73 (41%), Gaps = 6/73 (8%) Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 G + ++ + P P D K G++ N N + EM MI ++ F + + Sbjct: 77 NGIIEDSSNLEARYEPNHPSAD------KDGYVYYPNVNVVEEMADMISASRSFQTNAEI 130 Query: 227 IDENEKSMLEAIR 239 ++ + M + + Sbjct: 131 MNTAKSMMQKVLT 143 Score = 40.2 bits (92), Expect = 0.26, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 6/58 (10%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQ 54 FNI +A A RL+T A N++N +TV +R F+ V+ ++ Sbjct: 5 NVFNIAGSAMSAQTTRLNTTASNIANAETVSSSMDQTYRARHPVFATVMQGQQSTGGS 62 >gi|330830305|ref|YP_004393257.1| flagellar basal-body rod protein FlgC [Aeromonas veronii B565] gi|328805441|gb|AEB50640.1| Flagellar basal-body rod protein FlgC [Aeromonas veronii B565] Length = 139 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 23/43 (53%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 GF+ N N + EM MI+ ++ + + + D +K + + ++ Sbjct: 93 GFIFKPNVNMVEEMADMINASRSYQTNVQVADSAKKMLQQTLQ 135 Score = 36.4 bits (82), Expect = 3.6, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 6/55 (10%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKND 51 F+I +A A RL+TVA NM+N D+V + + F+ + +D Sbjct: 5 KVFDIAGSAMSAQSVRLNTVASNMANADSVSSSVENTYHARRPVFAAQLDQAMSD 59 >gi|208435438|ref|YP_002267104.1| flagellar basal-body rod protein [Helicobacter pylori G27] gi|308183713|ref|YP_003927840.1| flagellar basal body rod protein FlgC [Helicobacter pylori PeCan4] gi|208433367|gb|ACI28238.1| flagellar basal-body rod protein [Helicobacter pylori G27] gi|308065898|gb|ADO07790.1| flagellar basal body rod protein FlgC [Helicobacter pylori PeCan4] Length = 161 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 8/44 (18%), Positives = 19/44 (43%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 +G++ N N++ EM ++ T+ + + + AI Sbjct: 113 AQGYVAYPNVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAI 156 Score = 39.5 bits (90), Expect = 0.44, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 6/49 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44 +SF+I A R + ++ N++N +T G +R + F Sbjct: 3 LSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFRAF 51 >gi|332088752|gb|EGI93864.1| flagellar basal-body rod protein FlgC [Shigella boydii 5216-82] Length = 134 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 6/40 (15%), Positives = 21/40 (52%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 G+++ N + + EM + ++ + + +++ + ML+ Sbjct: 89 GYVKMPNVDVVGEMVNTMSASRSYQANVEVLNTVKSMMLK 128 Score = 39.1 bits (89), Expect = 0.60, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 6/47 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42 F+I +A A QRL+ A N++N G +R +V F Sbjct: 4 LNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRAKQVVFQ 50 >gi|170768138|ref|ZP_02902591.1| flagellar basal-body rod protein FlgC [Escherichia albertii TW07627] gi|170122904|gb|EDS91835.1| flagellar basal-body rod protein FlgC [Escherichia albertii TW07627] Length = 134 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 11/89 (12%), Positives = 35/89 (39%) Query: 148 ISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSM 207 + K + + + G V+ + S E + + +G+++ N + + Sbjct: 40 QPYRAKQVVFQVNAAPGAATGGVKVADVIESQAPDKWVYEPGNPLADAKGYVKMPNVDVV 99 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLE 236 EM + ++ + + +++ + ML+ Sbjct: 100 GEMVNTMSASRSYQANVEVLNTVKSMMLK 128 Score = 38.7 bits (88), Expect = 0.63, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 6/47 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42 F+I +A A QRL+ A N++N G +R +V F Sbjct: 4 LNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRAKQVVFQ 50 >gi|229918625|ref|YP_002887271.1| flagellar basal-body rod protein FlgC [Exiguobacterium sp. AT1b] gi|229470054|gb|ACQ71826.1| flagellar basal-body rod protein FlgC [Exiguobacterium sp. AT1b] Length = 142 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 6/41 (14%), Positives = 23/41 (56%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 G+++ N + + EM ++ T+ + + ++ ++ +++A Sbjct: 96 GYVQMPNVDLLKEMVDLMGATRSYEANIAAMNASKAMLVKA 136 Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 11/32 (34%), Positives = 18/32 (56%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32 M SF+I +A + R+ TV+ N++N T Sbjct: 3 MFDSFHISASALTSQRLRMDTVSANIANAQTT 34 >gi|158321541|ref|YP_001514048.1| flagellar hook-associated protein FlgK [Alkaliphilus oremlandii OhILAs] gi|158141740|gb|ABW20052.1| flagellar hook-associated protein FlgK [Alkaliphilus oremlandii OhILAs] Length = 522 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 23/195 (11%), Positives = 51/195 (26%), Gaps = 17/195 (8%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKF-SEVVGAIKNDIDQKISFVASG 62 F + A ++ L N++N +T G+ +++ + + V + Sbjct: 7 GFTTAKSGLFASQRALDITGHNLANVNTKGYSRQRLEQVQSTPLKLAGGQGMLGTGVDTT 66 Query: 63 KEYL------SKEVGSFISTGTELDFALEGDAWFALESPRG----------IILTRDGRF 106 + + + D +G A+ + Sbjct: 67 AIHQLRNEFLDYKYRDEATAFGYWDAKADGLAFIESIMNEPSDTGITKVIDQMFESFHEL 126 Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 + A + + + E V E+ K I T G ++ Sbjct: 127 SKNPNNITTRALVRQRATTFTNSVNHTYNQLEKMVVDYNFEVQSMVKSINTYGEQIARLN 186 Query: 167 QGFVRRENSGISPNI 181 +R E G + N Sbjct: 187 DQILRFEVDGSNAND 201 Score = 45.6 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 6/41 (14%), Positives = 16/41 (39%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S + E+ M+ +N+ ++ ++ + I I Sbjct: 478 SGVSEDEELANMVKFQHAYNASARMMTTIDEMLDVLINRIG 518 >gi|254227989|ref|ZP_04921419.1| flagellar hook-associated protein FlgK [Vibrio sp. Ex25] gi|151939485|gb|EDN58313.1| flagellar hook-associated protein FlgK [Vibrio sp. Ex25] Length = 457 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 27/88 (30%), Gaps = 1/88 (1%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 NI L+ A L A N++N +TVG+ + + V N + V Sbjct: 1 MNLVNIALSGLGANRVALDVTAQNVANVNTVGYSRQQALMASVDDGKANRLSP-GLGVEV 59 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAW 89 + T + A + Sbjct: 60 TSIRRVTDQFLIKQTWSTNSMAAYASGY 87 >gi|95929847|ref|ZP_01312588.1| flagellar basal-body rod protein FlgC [Desulfuromonas acetoxidans DSM 684] gi|95134143|gb|EAT15801.1| flagellar basal-body rod protein FlgC [Desulfuromonas acetoxidans DSM 684] Length = 143 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 +G++ N + + E M+ T+ + + T I ++ L+A+ I Sbjct: 97 QGYVALPNIDLLKETTDMMLATRAYEANITTIKSAKRMALKAL-EIG 142 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 8/50 (16%) Query: 1 MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFS 42 M TS NI +A A RL T++ NM+N +T G +R V F Sbjct: 1 MDIFTSLNISSSALKAQRIRLDTISSNMANAETTRTPEGGPYRRKMVVFE 50 >gi|84514827|ref|ZP_01002190.1| FlgK flagellar hook-associated protein 1 [Loktanella vestfoldensis SKA53] gi|84510986|gb|EAQ07440.1| FlgK flagellar hook-associated protein 1 [Loktanella vestfoldensis SKA53] Length = 1421 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 23/46 (50%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46 M + +IG +A A + L+ N+ N +T G+R +EV G Sbjct: 1 MASLLDIGRSAVQAQREALNVTGQNIVNANTEGYRRRDATLTEVYG 46 >gi|315497622|ref|YP_004086426.1| flagellar hook-associated protein flgk [Asticcacaulis excentricus CB 48] gi|315415634|gb|ADU12275.1| flagellar hook-associated protein FlgK [Asticcacaulis excentricus CB 48] Length = 718 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 36/78 (46%), Gaps = 1/78 (1%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGF-RTIKVKFSEVVGAIKNDIDQKISFVA 60 + NIG + + + +L V+DN+SN +T G+ R + + + V+G+ + +A Sbjct: 4 NSILNIGASGLMTAQSQLRVVSDNISNVNTPGYIRKVGTQQASVIGSQGAGVMSGQVMLA 63 Query: 61 SGKEYLSKEVGSFISTGT 78 + K + + S Sbjct: 64 ADKYLQQAAMRANSSASQ 81 Score = 37.2 bits (84), Expect = 2.0, Method: Composition-based stats. Identities = 5/36 (13%), Positives = 13/36 (36%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 N E+ + Q +++ + LI ++ Sbjct: 681 VNLDEELINLTTYQQAYSASSRLIQAAKEMYDVLFN 716 >gi|254470324|ref|ZP_05083728.1| flagellar basal-body rod protein FlgC [Pseudovibrio sp. JE062] gi|211960635|gb|EEA95831.1| flagellar basal-body rod protein FlgC [Pseudovibrio sp. JE062] Length = 136 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 17/119 (14%), Positives = 37/119 (31%), Gaps = 11/119 (9%) Query: 1 MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGA-IKN 50 M S I + A R+ +A+N++N D+ G +R FS A ++ Sbjct: 1 MDFIKSMFIAASGLKAQTGRMRVIAENIANADSTGQTPGEDPYRRKVPTFSSSFDAKVEA 60 Query: 51 DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109 ++ + E+ + + + + + TR + Sbjct: 61 ELVKLGRVREDKSEFKLRYEPDHPAANDKGYVKMPNVNTLVEMADMQEA-TRSYEANLN 118 Score = 50.3 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 8/46 (17%), Positives = 22/46 (47%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G+++ N N++ EM M T+ + + ++ + M + + + Sbjct: 90 GYVKMPNVNTLVEMADMQEATRSYEANLNVVKSSRSMMQKTLDILR 135 >gi|169831913|ref|YP_001717895.1| flagellar basal-body rod protein FlgC [Candidatus Desulforudis audaxviator MP104C] gi|169638757|gb|ACA60263.1| flagellar basal-body rod protein FlgC [Candidatus Desulforudis audaxviator MP104C] Length = 139 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 30/88 (34%), Gaps = 7/88 (7%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKN-DIDQK 55 SF I + A RL +++N++N T G +R F++ + + Sbjct: 5 KSFGISGSGMTAERLRLDLISNNIANAHTTRTREGGPYRREVPVFAQYLERFRGRGFAGA 64 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFA 83 V + + S + D A Sbjct: 65 GVRVTAVVKDPSPLRAVHEPEHPDADAA 92 Score = 44.1 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 6/48 (12%), Positives = 20/48 (41%), Gaps = 1/48 (2%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 GF++ N + E ++ ++ + + D ++ + A+ + Sbjct: 91 AAGFVQYPNVDLNREFVDLMGASRAYEANAAAFDAAKQMVQRAL-ELG 137 >gi|307638243|gb|ADN80693.1| Flagellar basal-body rod protein [Helicobacter pylori 908] gi|325996836|gb|ADZ52241.1| Flagellar basal-body rod protein [Helicobacter pylori 2018] gi|325998428|gb|ADZ50636.1| Flagellar basal-body rod protein [Helicobacter pylori 2017] Length = 161 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 8/44 (18%), Positives = 19/44 (43%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 +G++ N N++ EM ++ T+ + + + AI Sbjct: 113 AQGYVAYPNVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAI 156 Score = 39.5 bits (90), Expect = 0.45, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 6/49 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44 +SF+I A R + ++ N++N +T G +R + F Sbjct: 3 LSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFRAF 51 >gi|126463750|ref|YP_001044864.1| flagellar basal body rod protein FlgC [Rhodobacter sphaeroides ATCC 17029] gi|332559806|ref|ZP_08414128.1| flagellar basal body rod protein FlgC2 [Rhodobacter sphaeroides WS8N] gi|126105414|gb|ABN78092.1| protein of unknown function DUF1078 domain protein [Rhodobacter sphaeroides ATCC 17029] gi|332277518|gb|EGJ22833.1| flagellar basal body rod protein FlgC2 [Rhodobacter sphaeroides WS8N] Length = 126 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 20/42 (47%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 S + + + RL V++N++N DT G+ V F E Sbjct: 5 LQSLGLSASGMRSQALRLRHVSENIANADTPGYHRKTVSFQE 46 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 8/79 (10%), Positives = 25/79 (31%) Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223 D G V + + + + G+ + SN + + E+ + + + Sbjct: 47 DPDSGLVSTGPVRLDRSELQKIYAPGHPLAGEDGYYDGSNVDLVVEVADAREAQRSYEAN 106 Query: 224 TTLIDENEKSMLEAIRNIA 242 + D+ + + + Sbjct: 107 LRMFDQARQMTQSLLDLLR 125 >gi|114706769|ref|ZP_01439669.1| flagellar basal-body rod protein C [Fulvimarina pelagi HTCC2506] gi|114537717|gb|EAU40841.1| flagellar basal-body rod protein C [Fulvimarina pelagi HTCC2506] Length = 138 Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 14/101 (13%), Positives = 32/101 (31%) Query: 143 GEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDS 202 G K + VR + G + + + + G+++ Sbjct: 38 DTPGADPYVRKTVTFGATLDEVTGANLVRVTDIGTDKADFESTYDPGNPAADENGYVKRP 97 Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 N N + EM M + + + +I + + + I + S Sbjct: 98 NVNMLTEMMDMREANRSYEANIQVIKQAREIINMTIDLLRS 138 Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 12/55 (21%), Positives = 22/55 (40%), Gaps = 7/55 (12%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKN 50 +S I + A RL V++N++N +T G + V F + + Sbjct: 7 SSLKIAASGMEAQSTRLRVVSENVANAETTGDTPGADPYVRKTVTFGATLDEVTG 61 >gi|326792655|ref|YP_004310476.1| flagellar hook-associated protein FlgK [Clostridium lentocellum DSM 5427] gi|326543419|gb|ADZ85278.1| flagellar hook-associated protein FlgK [Clostridium lentocellum DSM 5427] Length = 645 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 13/155 (8%), Positives = 38/155 (24%), Gaps = 12/155 (7%) Query: 100 LTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG 159 + + G + + + + ++ G + G + Sbjct: 489 YSTGSSTGMPATGEDLVGNNYSKMTATNITISKEIYENASNMRSTYGADEESGSDLFRAL 548 Query: 160 LYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLED------------SNANSM 207 D S+ F + +I + + + E S + Sbjct: 549 SNQKDNSKMFKEGDPKDYMASIFSELGINAQEALMYQSTQESVTGIIKNQRLSVSQVDLT 608 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 E +I Q + + +++ + I + Sbjct: 609 EEFTSLIKYQQAYQASAKIMNTIDGIYETTIFKLG 643 Score = 45.6 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 9/33 (27%), Positives = 18/33 (54%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTI 37 FN+ L+ A ++ L ++N++N T G+ Sbjct: 6 FNVALSGLFAAQRGLHVTSNNITNASTDGYSRQ 38 >gi|220934392|ref|YP_002513291.1| flagellar basal-body rod protein FlgC [Thioalkalivibrio sp. HL-EbGR7] gi|219995702|gb|ACL72304.1| flagellar basal-body rod protein FlgC [Thioalkalivibrio sp. HL-EbGR7] Length = 139 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 7/44 (15%), Positives = 24/44 (54%) Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +G++ N + + EM MI ++ + + +++ ++ +L ++ Sbjct: 92 QGYIFKPNVSVVEEMANMISASRSYQNNVEVMNTTKQLLLRTLQ 135 Score = 37.2 bits (84), Expect = 2.1, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 30/81 (37%), Gaps = 6/81 (7%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNT----DTV--GFRTIKVKFSEVVGAIKNDIDQKI 56 F++ +A A RL+ +A NM+N T +R F+ V+ A Sbjct: 6 KIFDVSGSALSAQSVRLNAIASNMANAQVASQTPEGAYRAKHPVFASVLQAAGQSGSATP 65 Query: 57 SFVASGKEYLSKEVGSFISTG 77 V + E ++ V + Sbjct: 66 VRVVNVLESQAEPVAEYAPNH 86 >gi|77460471|ref|YP_349978.1| flagellar basal body rod protein FlgC [Pseudomonas fluorescens Pf0-1] gi|77384474|gb|ABA75987.1| putative flagellar basal-body rod protein [Pseudomonas fluorescens Pf0-1] Length = 147 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 30/72 (41%), Gaps = 6/72 (8%) Query: 168 GFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 G V +++ + P P D G++ N N + EM MI ++ F + ++ Sbjct: 79 GVVEDQSNLEARYEPNHPAADAK------GYVYYPNVNVVEEMADMISASRSFQTNAEMM 132 Query: 228 DENEKSMLEAIR 239 + + M + + Sbjct: 133 NTAKTMMQKVLT 144 Score = 40.6 bits (93), Expect = 0.17, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 29/80 (36%), Gaps = 6/80 (7%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKISF 58 FNI + A RL+TVA N++N +TV +R F+ + ++ + Sbjct: 7 FNIAGSGMSAQTTRLNTVASNIANAETVSSSIDQTYRARHPVFATMFQGGQSGGSNSLFQ 66 Query: 59 VASGKEYLSKEVGSFISTGT 78 + +G Sbjct: 67 NQDAAGQGVQVMGVVEDQSN 86 >gi|82702451|ref|YP_412017.1| flagellar basal-body rod protein FlgC [Nitrosospira multiformis ATCC 25196] gi|82410516|gb|ABB74625.1| flagellar basal-body rod protein FlgC [Nitrosospira multiformis ATCC 25196] Length = 139 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 22/43 (51%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 GF+ N N + EM MI ++ + + +++ + +L+ + Sbjct: 94 GFVTMPNVNVVEEMVDMISASRSYQNNVDMMNTAKTLLLKTLT 136 Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 25/64 (39%), Gaps = 6/64 (9%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56 F + +A A QRL+ VA N++N D+ ++ +V F N I Sbjct: 5 NIFTVAGSAMTAQNQRLNVVASNLANADSAASSNGQPYKAKQVVFMSTSPLGDNGISNGT 64 Query: 57 SFVA 60 V Sbjct: 65 HGVR 68 >gi|88799018|ref|ZP_01114599.1| Flagellar basal body protein [Reinekea sp. MED297] gi|88778245|gb|EAR09439.1| Flagellar basal body protein [Reinekea sp. MED297] Length = 132 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 35/88 (39%), Gaps = 1/88 (1%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + S I A L +R S +A+N++N DT GF+ + F ++ + Sbjct: 7 ENSLGIHDNALLVRSERSSVLANNLANADTPGFKARDMDFKAILRGEVEKQQSLEMAETN 66 Query: 62 GKEYLSKEVGSFISTG-TELDFALEGDA 88 + ++ + L +++G+ Sbjct: 67 SRHIPGRQHEGWEKLYRHPLQPSIDGNT 94 >gi|86149025|ref|ZP_01067257.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp. jejuni CF93-6] gi|88596860|ref|ZP_01100096.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp. jejuni 84-25] gi|218562179|ref|YP_002343958.1| flagellar basal body rod protein FlgC [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|85840383|gb|EAQ57640.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp. jejuni CF93-6] gi|88190549|gb|EAQ94522.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp. jejuni 84-25] gi|112359885|emb|CAL34673.1| flagellar basal-body rod protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|315928561|gb|EFV07858.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp. jejuni 305] Length = 164 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 9/46 (19%), Positives = 19/46 (41%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G++ N N + EM +I T+ + + + + AI + Sbjct: 118 GYVAYPNVNPVIEMADLIEATRAYQANVSAFTSAKTISQSAIDLLR 163 Score = 43.3 bits (100), Expect = 0.031, Method: Composition-based stats. Identities = 9/39 (23%), Positives = 18/39 (46%), Gaps = 6/39 (15%) Query: 11 AQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43 A R++ ++ N++N +T G +R +V F Sbjct: 13 GLSAQRFRMNVISSNIANANTTRTAEGGPYRRREVIFKA 51 >gi|91224193|ref|ZP_01259456.1| putative flagellar hook-associated protein [Vibrio alginolyticus 12G01] gi|91191104|gb|EAS77370.1| putative flagellar hook-associated protein [Vibrio alginolyticus 12G01] Length = 457 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 27/88 (30%), Gaps = 1/88 (1%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 NI L+ A L A N++N +TVG+ + + V N + V Sbjct: 1 MNLVNIALSGLGANRVALDVTAQNVANVNTVGYSRQQALMASVDDGKANRLSP-GLGVEV 59 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAW 89 + T + A + Sbjct: 60 TSIRRVTDQFLIKQTWSTNSMAAYASGY 87 >gi|16078682|ref|NP_389501.1| flagellar basal body rod protein FlgC [Bacillus subtilis subsp. subtilis str. 168] gi|221309494|ref|ZP_03591341.1| flagellar basal body rod protein FlgC [Bacillus subtilis subsp. subtilis str. 168] gi|221313819|ref|ZP_03595624.1| flagellar basal body rod protein FlgC [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221318743|ref|ZP_03600037.1| flagellar basal body rod protein FlgC [Bacillus subtilis subsp. subtilis str. JH642] gi|221323014|ref|ZP_03604308.1| flagellar basal body rod protein FlgC [Bacillus subtilis subsp. subtilis str. SMY] gi|321315385|ref|YP_004207672.1| flagellar basal body rod protein FlgC [Bacillus subtilis BSn5] gi|120294|sp|P24501|FLGC_BACSU RecName: Full=Flagellar basal-body rod protein flgC gi|142916|gb|AAA22442.1| flgC [Bacillus subtilis] gi|2633991|emb|CAB13492.1| flagellar component of cell-proximal portion of basal-body rod [Bacillus subtilis subsp. subtilis str. 168] gi|320021659|gb|ADV96645.1| flagellar basal body rod protein FlgC [Bacillus subtilis BSn5] Length = 150 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 14/108 (12%), Positives = 42/108 (38%), Gaps = 3/108 (2%) Query: 131 IQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS 190 +P + ++ ++ KGE G + + N+ P + + Sbjct: 42 EWVPYRRKMVSLQSKGESFSSILNSQMSGSGNAGNGVKVSKITEDDSDFNLVYDPTDPDA 101 Query: 191 GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G+++ N + + EM ++ T+ + + T ++ + +++A+ Sbjct: 102 NAE---GYVQKPNVDPLKEMVDLVSSTRSYEANVTAMNATKGMLMKAL 146 Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 38/113 (33%), Gaps = 17/113 (15%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTV------G----FRTIKV-------KFSEVVG 46 S N+ +A A R+ V+ N++N DT G +R V FS ++ Sbjct: 6 SLNVSASALTAQRVRMDVVSSNLANMDTTRAKQVNGEWVPYRRKMVSLQSKGESFSSILN 65 Query: 47 AIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 + + + V K + + T+ D EG P + Sbjct: 66 SQMSGSGNAGNGVKVSKITEDDSDFNLVYDPTDPDANAEGYVQKPNVDPLKEM 118 >gi|317014993|gb|ADU82429.1| flagellar basal body rod protein FlgC [Helicobacter pylori Gambia94/24] Length = 161 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 8/44 (18%), Positives = 19/44 (43%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 +G++ N N++ EM ++ T+ + + + AI Sbjct: 113 AQGYVAYPNVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAI 156 Score = 39.5 bits (90), Expect = 0.48, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 6/49 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44 +SF+I A R + ++ N++N +T G +R + F Sbjct: 3 LSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFRAF 51 >gi|269960122|ref|ZP_06174498.1| putative flagellar hook-associated protein 1 [Vibrio harveyi 1DA3] gi|269835093|gb|EEZ89176.1| putative flagellar hook-associated protein 1 [Vibrio harveyi 1DA3] Length = 457 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 18/43 (41%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44 NI L+ A L A N++N +T G+ + + V Sbjct: 1 MNLVNIALSGLNANRVALDVTAQNVANINTPGYSRQQALTASV 43 >gi|302382561|ref|YP_003818384.1| flagellar hook-associated protein FlgK [Brevundimonas subvibrioides ATCC 15264] gi|302193189|gb|ADL00761.1| flagellar hook-associated protein FlgK [Brevundimonas subvibrioides ATCC 15264] Length = 707 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 23/51 (45%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 + NI + A +Q+L V+DN+SN +T G+ + + + Sbjct: 4 NSILNIANSGLQAAQQQLRVVSDNVSNVNTPGYVRKIAEQTSLTTQGVGSG 54 Score = 39.5 bits (90), Expect = 0.40, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 14/41 (34%), Gaps = 3/41 (7%) Query: 201 DSN---ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 SN N E+ M Q FN+ LI + + Sbjct: 663 QSNYEGVNLDEELVLMTTYQQAFNASARLIQAAQDMYDTLL 703 >gi|238758112|ref|ZP_04619292.1| Flagellar basal-body rod protein flgC [Yersinia aldovae ATCC 35236] gi|238703650|gb|EEP96187.1| Flagellar basal-body rod protein flgC [Yersinia aldovae ATCC 35236] Length = 134 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 20/43 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N + EM I ++ + + +++ + ML+ + Sbjct: 89 GYVRMPNVDVTGEMINTISASRSYQANVEVLNTTKSLMLKTLT 131 Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 23/58 (39%), Gaps = 6/58 (10%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSEVVGAIKNDID 53 F+I +A A QRL+ A NM+N G +R +V F A + Sbjct: 4 LNIFDIAGSALSAQSQRLNVSASNMANAESVTGPDGQPYRAKQVVFQVAAQAGQETGG 61 >gi|167034937|ref|YP_001670168.1| flagellar hook-associated protein FlgK [Pseudomonas putida GB-1] gi|166861425|gb|ABY99832.1| flagellar hook-associated protein FlgK [Pseudomonas putida GB-1] Length = 680 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 11/39 (28%), Positives = 21/39 (53%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39 M + +IGL+ A + LS ++N++N T G+ + Sbjct: 1 MSSLISIGLSGLSASQAALSVTSNNIANAATSGYSRQQT 39 >gi|85712252|ref|ZP_01043303.1| Flagellar basal body rod protein [Idiomarina baltica OS145] gi|85693879|gb|EAQ31826.1| Flagellar basal body rod protein [Idiomarina baltica OS145] Length = 150 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ SN N+M EM MI ++ + + + D + +R Sbjct: 104 GYIYRSNVNTMEEMANMISASRSYQTNVQVADTAKTMTQRLLR 146 Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 23/54 (42%), Gaps = 6/54 (11%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKN 50 FNI +A A RL+T A N++N ++V +R F+ + Sbjct: 5 NIFNISGSAMSAQSVRLNTTASNLANANSVSSSIDETYRARSPIFAAALSDASG 58 >gi|311070047|ref|YP_003974970.1| flagellar hook-associated protein FlgK [Bacillus atrophaeus 1942] gi|310870564|gb|ADP34039.1| flagellar hook-associated protein FlgK [Bacillus atrophaeus 1942] Length = 507 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 18/43 (41%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 S + EM MI +N+ ++ ++ + + I + + Sbjct: 462 MSAVSLDEEMTNMIQFQHAYNAAARMVTLQDEMLDKVINGMGA 504 Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 18/40 (45%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 A A + LST A+N++N +T G+ +V Sbjct: 7 GLETARRALSAQQAALSTTANNVANANTDGYTRQRVSLEA 46 >gi|260779341|ref|ZP_05888233.1| flagellar hook-associated protein FlgK [Vibrio coralliilyticus ATCC BAA-450] gi|260605505|gb|EEX31800.1| flagellar hook-associated protein FlgK [Vibrio coralliilyticus ATCC BAA-450] Length = 457 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 18/43 (41%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44 NI L+ A L A N+SN +T G+ + + V Sbjct: 1 MNLVNIALSGLNANRVALDVTAQNVSNINTPGYSRQQALMASV 43 >gi|299534789|ref|ZP_07048119.1| flagellar basal body rod protein FlgC [Lysinibacillus fusiformis ZC1] gi|298729877|gb|EFI70422.1| flagellar basal body rod protein FlgC [Lysinibacillus fusiformis ZC1] Length = 153 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 23/42 (54%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N + + EM ++ T+ + + T+ + N+ + +A+ Sbjct: 108 GYVNMPNVDPLKEMVDLMSATRSYEANITVFNANKSMLTKAL 149 Score = 42.9 bits (99), Expect = 0.038, Method: Composition-based stats. Identities = 9/29 (31%), Positives = 14/29 (48%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTV 32 N +A A R+ ++ NM+N DT Sbjct: 6 GMNTTASALTAQRLRMDVISSNMANMDTT 34 >gi|218135315|ref|ZP_03464119.1| hypothetical protein BACPEC_03220 [Bacteroides pectinophilus ATCC 43243] gi|217990700|gb|EEC56711.1| hypothetical protein BACPEC_03220 [Bacteroides pectinophilus ATCC 43243] Length = 606 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 10/51 (19%), Positives = 20/51 (39%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 T +G + + + L+T A N++N + G+ +V S Sbjct: 5 MTGLYVGSSGLRSAQTALNTTAHNLANVNVKGYTRQQVALSSAEYFKIGQT 55 Score = 41.8 bits (96), Expect = 0.084, Method: Composition-based stats. Identities = 8/40 (20%), Positives = 19/40 (47%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 +S E+ MI Q +N+ + I+ ++ + + + S Sbjct: 567 VSSEEELQNMIKYQQAYNAASRYINVIDQMLEHIVTRLGS 606 >gi|157363535|ref|YP_001470302.1| flagellar hook-associated protein FlgK [Thermotoga lettingae TMO] gi|157314139|gb|ABV33238.1| flagellar hook-associated protein FlgK [Thermotoga lettingae TMO] Length = 841 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 8/39 (20%), Positives = 15/39 (38%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 + EM MI FN+ +I ++ + I + Sbjct: 799 VSLDEEMTNMIQYQHAFNASARVITTIDEMIGRVIDKLG 837 Score = 37.2 bits (84), Expect = 2.2, Method: Composition-based stats. Identities = 6/22 (27%), Positives = 13/22 (59%) Query: 19 LSTVADNMSNTDTVGFRTIKVK 40 ++ VA N++N+ T G+ + Sbjct: 1 MNVVAHNIANSSTDGYSRQRPV 22 >gi|288958048|ref|YP_003448389.1| flagellar basal-body rod protein [Azospirillum sp. B510] gi|288910356|dbj|BAI71845.1| flagellar basal-body rod protein [Azospirillum sp. B510] Length = 136 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 9/47 (19%), Positives = 20/47 (42%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G++ N NS+ E M + + + + ID + + I + + Sbjct: 90 GYVLMPNVNSVVEAMDMREAQRSYEANLSAIDTARQMLTRTIDILRT 136 Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats. Identities = 16/109 (14%), Positives = 32/109 (29%), Gaps = 10/109 (9%) Query: 1 MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFS-EVVGAIKN 50 M S + + A RL +++N++N T +R V F E+ A+ Sbjct: 1 MDLYKSMAVSASGMKAQGTRLKVISENLANASTTAETPGDLPYRRKTVVFKNELDRAMDV 60 Query: 51 DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 D + ++ + S S + + Sbjct: 61 DKVRVAKVDVDKSDFQRRYDPSHPSADADGYVLMPNVNSVVEAMDMREA 109 >gi|241765797|ref|ZP_04763738.1| flagellar hook-associated protein FlgK [Acidovorax delafieldii 2AN] gi|241364308|gb|EER59458.1| flagellar hook-associated protein FlgK [Acidovorax delafieldii 2AN] Length = 664 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 21/51 (41%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 + N+G A LA + L T N++N +T G+ V V G Sbjct: 1 MSLLNVGARALLANQVALQTAGHNIANVNTPGYSRQTVVLQTVQGQFTGGG 51 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 18/150 (12%), Positives = 40/150 (26%), Gaps = 9/150 (6%) Query: 98 IILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157 T + G ++ G D +V + + + G S + Sbjct: 518 QPYTPGAPISID--GWQITLQGTPKSGDTVNVGNALDPQYGDYYTRNAGNASALMGLRDV 575 Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLED-----SNANSMYEMGQ 212 + +S G+ + + T LE S N E + Sbjct: 576 KMFDNATLSDGYAGAIAQVGTRTQS--ASFAANLSTTIAANLERDRTAVSGVNLDEEAAK 633 Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 +I Q + + ++ + I+ + Sbjct: 634 LIQFQQAYQASAKMLQIAQNIFDNLIQTVG 663 >gi|90411003|ref|ZP_01219017.1| flagellar basal body rod protein [Photobacterium profundum 3TCK] gi|90328216|gb|EAS44527.1| flagellar basal body rod protein [Photobacterium profundum 3TCK] Length = 138 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 23/43 (53%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N M EM MI ++ + S + D +++ ++ ++ Sbjct: 93 GYIYKPNVNVMEEMANMISASRSYQSNVQVADASKQMLMSTLQ 135 Score = 35.6 bits (80), Expect = 6.1, Method: Composition-based stats. Identities = 16/111 (14%), Positives = 39/111 (35%), Gaps = 10/111 (9%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVV----GAIKNDI 52 FN+ +A A RL+T + N++N ++V ++ F+ + + Sbjct: 5 NVFNVTGSAMSAESVRLNTTSSNLANANSVSSSAEETYKARHPIFAAALNSASYQRAESV 64 Query: 53 DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103 ++ + ++ L E + + + + E I +R Sbjct: 65 PVQVKGIVESQKPLRAEYNPQHPLANDEGYIYKPNVNVMEEMANMISASRS 115 >gi|304316911|ref|YP_003852056.1| flagellar basal-body rod protein FlgB [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778413|gb|ADL68972.1| flagellar basal-body rod protein FlgB [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 136 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 21/41 (51%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51 A A E R +++N++N DT GF+ V F ++ N Sbjct: 15 ALDASELRDEVISNNIANVDTPGFKRSDVNFESILNDAINS 55 >gi|238924172|ref|YP_002937688.1| flagellar basal body rod protein [Eubacterium rectale ATCC 33656] gi|238875847|gb|ACR75554.1| flagellar basal body rod protein [Eubacterium rectale ATCC 33656] gi|291524901|emb|CBK90488.1| flagellar basal-body rod protein FlgC [Eubacterium rectale DSM 17629] Length = 146 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N++ EM +I T+ + + T + ++ ++ Sbjct: 101 GYVSYPNVNTVTEMTNLIDATRAYEANATAFEASKSMAQNGLQ 143 Score = 48.3 bits (113), Expect = 9e-04, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 31/86 (36%), Gaps = 6/86 (6%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56 +FNI + A R +A N++N +T +R V FSE + I Sbjct: 5 QAFNISASGMTAERFRTDIIAQNIANVNTTSTKEGTPYRRKIVTFSEKNVTPFSQIYSSS 64 Query: 57 SFVASGKEYLSKEVGSFISTGTELDF 82 A G V S ST ++ Sbjct: 65 KKAAVGNGVKVSSVTSDYSTDFIKEY 90 >gi|332284017|ref|YP_004415928.1| flagellar basal body rod protein FlgC [Pusillimonas sp. T7-7] gi|330427970|gb|AEC19304.1| flagellar basal body rod protein FlgC [Pusillimonas sp. T7-7] Length = 138 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 20/43 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N + + E MI ++ + + +I+ + M+ + Sbjct: 93 GYVTMPNVDVVAETVNMISASRSYQANVEVINTAKSLMMRTLS 135 Score = 37.5 bits (85), Expect = 1.4, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 6/55 (10%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKND 51 + F I +A A QR++ A N++N D+V +R +V F A ++ Sbjct: 5 SIFQIAGSALTAQSQRMNVTASNLANADSVAGPDGQPYRARQVVFQMAPVAGQSQ 59 >gi|330880524|gb|EGH14673.1| flagellar hook protein FlgE [Pseudomonas syringae pv. glycinea str. race 4] Length = 52 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 9/48 (18%), Positives = 17/48 (35%) Query: 192 VTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + LE+SN + E+ +I + + I M I+ Sbjct: 3 GYITGQALEESNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQTTIQ 50 >gi|315281334|ref|ZP_07869981.1| flagellar basal body rod protein FlgG [Listeria marthii FSL S4-120] gi|313615022|gb|EFR88519.1| flagellar basal body rod protein FlgG [Listeria marthii FSL S4-120] Length = 111 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 14/97 (14%), Positives = 34/97 (35%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 IG A + Q + ++N++N T GF+ ++ + N + ++ Sbjct: 1 MKGLYIGAAGMMNYMQHIQVHSNNVANAQTPGFKFDQLTSEVISRNKVNYQNGPVARQVG 60 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98 +Y + + I+ + D F ++ Sbjct: 61 TIDYGVRPAATHINLTAGSSYITNRDRDFFMQDTNPT 97 >gi|291529042|emb|CBK94628.1| flagellar basal-body rod protein FlgC [Eubacterium rectale M104/1] Length = 146 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N++ EM +I T+ + + T + ++ ++ Sbjct: 101 GYVSYPNVNTVTEMTNLIDATRAYEANATAFEASKSMAQNGLQ 143 Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 31/86 (36%), Gaps = 6/86 (6%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56 +FNI + A R +A N++N +T +R V FSE + I Sbjct: 5 QAFNISASGMTAERFRTDIIAQNIANVNTTSTKGGTPYRRKIVTFSEKNVTPFSQIYSSS 64 Query: 57 SFVASGKEYLSKEVGSFISTGTELDF 82 A G V S ST ++ Sbjct: 65 KKAAVGNGVKVSSVTSDYSTDFIKEY 90 >gi|153831692|ref|ZP_01984359.1| flagellar hook-associated protein FlgK [Vibrio harveyi HY01] gi|148872202|gb|EDL71019.1| flagellar hook-associated protein FlgK [Vibrio harveyi HY01] Length = 457 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 18/43 (41%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44 NI L+ A L A N++N +T G+ + + V Sbjct: 1 MNLVNIALSGLNANRVALDVTAQNVANINTPGYSRQQALTASV 43 >gi|32490788|ref|NP_871042.1| hypothetical protein WGLp039 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25165994|dbj|BAC24185.1| flgC [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 133 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 22/43 (51%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G+++ SN N + EM I ++ + + +I+ +L+ + Sbjct: 88 GYVKSSNVNMISEMINTISSSRSYQANVEVINTARSMILKTLT 130 >gi|315927025|gb|EFV06380.1| flagellar basal-body rod protein FlgC [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 144 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 9/46 (19%), Positives = 19/46 (41%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G++ N N + EM +I T+ + + + + AI + Sbjct: 98 GYVAYPNVNPVIEMADLIEATRAYQANVSAFTSAKTISQSAIDLLR 143 >gi|169827118|ref|YP_001697276.1| flagellar basal body rod protein FlgC [Lysinibacillus sphaericus C3-41] gi|168991606|gb|ACA39146.1| Flagellar basal-body rod protein [Lysinibacillus sphaericus C3-41] Length = 153 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 23/42 (54%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N + + EM ++ T+ + + T+ + N+ + +A+ Sbjct: 108 GYVNLPNVDPLKEMVDLMSATRSYEANVTVFNANKSMLTKAL 149 Score = 43.7 bits (101), Expect = 0.022, Method: Composition-based stats. Identities = 9/29 (31%), Positives = 14/29 (48%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTV 32 N +A A R+ ++ NM+N DT Sbjct: 6 GMNTTASALTAQRLRMDVISSNMANMDTT 34 >gi|126653751|ref|ZP_01725669.1| flagellar basal-body rod protein C [Bacillus sp. B14905] gi|126589715|gb|EAZ83851.1| flagellar basal-body rod protein C [Bacillus sp. B14905] Length = 153 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 23/42 (54%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N + + EM ++ T+ + + T+ + N+ + +A+ Sbjct: 108 GYVNLPNVDPLKEMVDLMSATRSYEANVTVFNANKSMLTKAL 149 Score = 43.7 bits (101), Expect = 0.022, Method: Composition-based stats. Identities = 9/29 (31%), Positives = 14/29 (48%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTV 32 N +A A R+ ++ NM+N DT Sbjct: 6 GMNTTASALTAQRLRMDVISSNMANMDTT 34 >gi|94312666|ref|YP_585875.1| flagellar basal body rod protein FlgB [Cupriavidus metallidurans CH34] gi|93356518|gb|ABF10606.1| flagellar basal body rod protein FlgB [Cupriavidus metallidurans CH34] gi|222834412|gb|EEE72889.1| predicted protein [Populus trichocarpa] Length = 134 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 29/75 (38%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR S +A N+++ DT G++ F+ + + S Sbjct: 14 ALSLRTQRQSVIASNIAHADTPGYKARDFDFASTLAQSVERGQRSEGTSLSTTSVRHLPG 73 Query: 71 GSFISTGTELDFALE 85 + STG ELD+ + Sbjct: 74 QAPTSTGHELDYRIP 88 >gi|319787115|ref|YP_004146590.1| flagellar hook-associated protein FlgK [Pseudoxanthomonas suwonensis 11-1] gi|317465627|gb|ADV27359.1| flagellar hook-associated protein FlgK [Pseudoxanthomonas suwonensis 11-1] Length = 625 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 25/42 (59%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 + + G A LA ++ LSTV+ N++N +T G+ +V F+ Sbjct: 1 MSVLSTGTGALLAFQRALSTVSHNVANVNTEGYTRQRVDFAA 42 >gi|260428875|ref|ZP_05782852.1| flagellar basal-body rod protein FlgC [Citreicella sp. SE45] gi|260419498|gb|EEX12751.1| flagellar basal-body rod protein FlgC [Citreicella sp. SE45] Length = 130 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 20/41 (48%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 + ++ + A RL V++N++N DT G+ + F Sbjct: 6 NALSVSSSGLRAQASRLRIVSENIANVDTPGYHRKTIPFET 46 Score = 39.5 bits (90), Expect = 0.43, Method: Composition-based stats. Identities = 4/46 (8%), Positives = 18/46 (39%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 GF + +N + + E+ + + + + ++ + + + Sbjct: 84 GFYDGTNVDLIVELADAREAQRSYEANLKMFEQTRQMSSNLLDLLR 129 >gi|313903612|ref|ZP_07837002.1| flagellar hook-associated protein FlgK [Thermaerobacter subterraneus DSM 13965] gi|313466165|gb|EFR61689.1| flagellar hook-associated protein FlgK [Thermaerobacter subterraneus DSM 13965] Length = 533 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 6/29 (20%), Positives = 12/29 (41%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKV 39 A ++ L N++N +T G+ Sbjct: 14 GLWAQQRALDVTGHNIANANTPGYSRQVA 42 Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 5/39 (12%), Positives = 13/39 (33%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 + EM Q++ + + L+ + + I Sbjct: 491 VSLDEEMTQLVRYQHAYAAAARLVTAVDSMLAVLIERTG 529 >gi|229541552|ref|ZP_04430612.1| flagellar hook-associated protein FlgK [Bacillus coagulans 36D1] gi|229325972|gb|EEN91647.1| flagellar hook-associated protein FlgK [Bacillus coagulans 36D1] Length = 538 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 8/41 (19%), Positives = 19/41 (46%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S+ + E+ MI Q +N+ +I ++ + + I + Sbjct: 494 SSVSVDEELTNMIKYQQAYNAAARMITMTDEMLDKIINGMG 534 Score = 41.8 bits (96), Expect = 0.081, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 16/40 (40%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 A A + L TV N++N +T G+ +V Sbjct: 6 GLETAKRALTAQQNALYTVGQNVANANTDGYTRQRVNLQA 45 >gi|269965650|ref|ZP_06179763.1| putative flagellar hook-associated protein [Vibrio alginolyticus 40B] gi|269829718|gb|EEZ83954.1| putative flagellar hook-associated protein [Vibrio alginolyticus 40B] Length = 107 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 27/88 (30%), Gaps = 1/88 (1%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 NI L+ A L A N++N +TVG+ + + V N + V Sbjct: 1 MNLVNIALSGLGANRVALDVTAQNVANVNTVGYSRQQALMASVDDGKANRLSP-GLGVEV 59 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAW 89 + T + A + Sbjct: 60 TSIRRVTDQFLIKQTWSTNSMAAYASGY 87 >gi|257095361|ref|YP_003169002.1| flagellar basal-body rod protein FlgC [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047885|gb|ACV37073.1| flagellar basal-body rod protein FlgC [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 134 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 7/34 (20%), Positives = 17/34 (50%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 G++ N N + EM MI ++ + + +++ Sbjct: 89 GYVTMPNVNVVDEMTNMISASRSYQTNVEVMNTA 122 Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 18/108 (16%), Positives = 33/108 (30%), Gaps = 6/108 (5%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSEVVGAIKNDIDQK 55 +F + +A A RL+ VA N++N VG +R +V F + Sbjct: 4 LNAFQVAGSALTAQSLRLNAVASNLANADSVVGSDGKPYRAKQVVFVATPMGSPAAEGVR 63 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103 + V + + + + E I +R Sbjct: 64 VKQVVEDSSPGRRVYDPRNPAADDRGYVTMPNVNVVDEMTNMISASRS 111 >gi|227820856|ref|YP_002824826.1| flagellar basal body rod protein FlgC [Sinorhizobium fredii NGR234] gi|227339855|gb|ACP24073.1| flagellar basal-body rod protein FlgC [Sinorhizobium fredii NGR234] Length = 139 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 12/99 (12%), Positives = 33/99 (33%) Query: 145 KGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNA 204 G + K I+ V + G + + + ++G ++ N Sbjct: 39 PGADPYRRKTISFAAEVDRASGASLVEVQRLGTDDSDFSIEFDPGNPAADEKGMVKMPNV 98 Query: 205 NSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 N + EM M + + + + ++ + + I + + Sbjct: 99 NVLIEMADMREANRAYEANLQTVKQSRDLISQTIDLLRA 137 Score = 42.5 bits (98), Expect = 0.045, Method: Composition-based stats. Identities = 11/60 (18%), Positives = 23/60 (38%), Gaps = 10/60 (16%) Query: 1 MQ---TSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKN 50 M ++ + + A RL V++N++N + G +R + F+ V Sbjct: 1 MDPLTSALKVSASGLQAESTRLRIVSENIANARSTGDVPGADPYRRKTISFAAEVDRASG 60 >gi|156973584|ref|YP_001444491.1| flagellar basal body rod protein FlgC [Vibrio harveyi ATCC BAA-1116] gi|156525178|gb|ABU70264.1| hypothetical protein VIBHAR_01287 [Vibrio harveyi ATCC BAA-1116] Length = 137 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 23/43 (53%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N M EM MI ++ + + + D +++ +L ++ Sbjct: 92 GYIYKPNVNVMEEMANMISASRAYQTNLQVADSSKQMLLRTLQ 134 Score = 38.3 bits (87), Expect = 1.0, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 26/81 (32%), Gaps = 6/81 (7%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56 FN+ +A A RL+T + N++N D+V ++ F + D Sbjct: 5 NVFNVTGSAMSAESVRLNTTSSNLANADSVSSSAKDTYKARHAVFGAELSNAMRGGDTVP 64 Query: 57 SFVASGKEYLSKEVGSFISTG 77 V E + Sbjct: 65 VKVMGIVESDKPLNAEYNPDH 85 >gi|291484170|dbj|BAI85245.1| flagellar basal body rod protein FlgC [Bacillus subtilis subsp. natto BEST195] Length = 150 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 14/108 (12%), Positives = 42/108 (38%), Gaps = 3/108 (2%) Query: 131 IQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS 190 +P + ++ ++ KGE G + + N+ P + + Sbjct: 42 EWVPYRRKMVSLQSKGESFSSILNSQMSGSGNAGNGVKVSKITEDDSDFNLVYDPTDPDA 101 Query: 191 GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G+++ N + + EM ++ T+ + + T ++ + +++A+ Sbjct: 102 NAD---GYVQKPNVDPLKEMVDLVSSTRSYEANVTAMNATKGMLMKAL 146 Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 38/113 (33%), Gaps = 17/113 (15%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTV------G----FRTIKV-------KFSEVVG 46 S N+ +A A R+ V+ N++N DT G +R V FS ++ Sbjct: 6 SLNVSASALTAQRVRMDVVSSNLANMDTTRAKQVNGEWVPYRRKMVSLQSKGESFSSILN 65 Query: 47 AIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 + + + V K + + T+ D +G P + Sbjct: 66 SQMSGSGNAGNGVKVSKITEDDSDFNLVYDPTDPDANADGYVQKPNVDPLKEM 118 >gi|255521621|ref|ZP_05388858.1| flagellar basal body rod protein FlgG [Listeria monocytogenes FSL J1-175] Length = 106 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 13/98 (13%), Positives = 28/98 (28%), Gaps = 1/98 (1%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN-DIDQKISFVA 60 IG A + Q + ++N++N T GF+ ++ + N V Sbjct: 1 MKGLYIGAAGMMNYMQHIQVHSNNVANAQTPGFKFDQLTSEVISRNKVNYQNGPVARQVG 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98 + + T +F ++ Sbjct: 61 TIDYGVRPAATHINLTAGSSYITNRDRDFFMQDTDPTQ 98 >gi|183222558|ref|YP_001840554.1| flagellar hook-associated protein FlgK [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189912593|ref|YP_001964148.1| flagellar hook-associated protein FlgK [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167777269|gb|ABZ95570.1| Endoflagellar hook junction protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167780980|gb|ABZ99278.1| Flagellar hook-associated protein 1 (HAP1) [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 637 Score = 51.0 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 8/39 (20%), Positives = 15/39 (38%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 N EM M+ Q +N+ +I + + I + Sbjct: 598 VNLDEEMANMVQFQQSYNASARMISTLNEMLDTIINRLG 636 >gi|54308095|ref|YP_129115.1| flagellar basal body rod protein FlgC [Photobacterium profundum SS9] gi|46912521|emb|CAG19313.1| Putative flagellar basal body rod protein FlgC [Photobacterium profundum SS9] Length = 138 Score = 51.0 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 23/43 (53%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N M EM MI ++ + S + D +++ ++ ++ Sbjct: 93 GYIYKPNVNVMEEMANMISASRSYQSNVQVADASKQMLMSTLQ 135 >gi|251797448|ref|YP_003012179.1| flagellar basal-body rod protein FlgB [Paenibacillus sp. JDR-2] gi|247545074|gb|ACT02093.1| flagellar basal-body rod protein FlgB [Paenibacillus sp. JDR-2] Length = 132 Score = 51.0 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 21/44 (47%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54 A A E R VA+N++N DT F+ +V F E++ Sbjct: 12 ALKASELRQGVVANNIANVDTPNFKRSEVLFEELLSQEMGGQTA 55 >gi|46581297|ref|YP_012105.1| flagellar basal-body rod protein [Desulfovibrio vulgaris str. Hildenborough] gi|46450718|gb|AAS97365.1| flagellar basal-body rod protein, putative [Desulfovibrio vulgaris str. Hildenborough] gi|311234961|gb|ADP87815.1| protein of unknown function DUF1078 domain protein [Desulfovibrio vulgaris RCH1] Length = 125 Score = 51.0 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 7/35 (20%), Positives = 15/35 (42%) Query: 199 LEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 +E SN ++ EM M+ + + I ++ Sbjct: 82 VEGSNTDTAREMVSMMETQRAHEANVASIRAHDDM 116 Score = 44.5 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 30/84 (35%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 + G AA A L A+N++N +T GFR + ++ G + + G Sbjct: 3 IDTGWAALDAFGIGLGVTANNIANVNTDGFRASQTRYETGPGGEGVRLGEIRESTTPGPL 62 Query: 65 YLSKEVGSFISTGTELDFALEGDA 88 + + + +EG Sbjct: 63 HEGMGIVEREGRMEQQRVLVEGSN 86 >gi|192362305|ref|YP_001982402.1| flagellar basal body rod protein FlgC [Cellvibrio japonicus Ueda107] gi|190688470|gb|ACE86148.1| flagellar basal-body rod protein FlgC [Cellvibrio japonicus Ueda107] Length = 148 Score = 51.0 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 15/106 (14%), Positives = 32/106 (30%), Gaps = 6/106 (5%) Query: 134 PQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT 193 G ++ G + + G V + P P D Sbjct: 46 QPVFAAIAQQAMGNLNGAGYSQNELDANAGVQVLGIVESDAPLQRRYEPGHPKADAD--- 102 Query: 194 VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N + EM MI ++ F +++ ++ + + Sbjct: 103 ---GYVFYPNVNPVEEMANMISASRSFQMNVEVMNSAKQMVQRVLT 145 Score = 37.2 bits (84), Expect = 2.4, Method: Composition-based stats. Identities = 11/59 (18%), Positives = 24/59 (40%), Gaps = 6/59 (10%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKIS 57 F+I A RL+T A N++N + +R+ + F+ + +++ Sbjct: 7 FDIAGTGMNAQSLRLNTTASNLANAQSASSSVDEVYRSRQPVFAAIAQQAMGNLNGAGY 65 >gi|323165582|gb|EFZ51369.1| flagellar basal-body rod protein FlgC [Shigella sonnei 53G] Length = 134 Score = 51.0 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 6/43 (13%), Positives = 22/43 (51%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G+++ N + + EM + ++ + + +++ + ML+ + Sbjct: 89 GYVKMPNVDVVGEMVNTMSASRSYQANVEVLNMVKSMMLKTLT 131 Score = 38.7 bits (88), Expect = 0.74, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 6/47 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS 42 F+I +A A QRL+ A N++N G +R +V F Sbjct: 4 LNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRAKQVVFQ 50 >gi|283850813|ref|ZP_06368099.1| flagellar hook-associated protein FlgK [Desulfovibrio sp. FW1012B] gi|283573736|gb|EFC21710.1| flagellar hook-associated protein FlgK [Desulfovibrio sp. FW1012B] Length = 709 Score = 51.0 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 12/72 (16%), Positives = 22/72 (30%) Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 G V + S + + + L S N E+ MI + + L Sbjct: 634 SGLVGKIGSDTANASYQASYQSTLAAQLDAAQLSASGVNLDEELTNMIKFQHSYQAAAKL 693 Query: 227 IDENEKSMLEAI 238 I ++ M + Sbjct: 694 ISTADQLMETVL 705 Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 13/77 (16%), Positives = 27/77 (35%), Gaps = 2/77 (2%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE--VVGAIKNDIDQKISFVASGKE 64 IG +A + L +N++N DT G+ + + V + + + Sbjct: 10 IGRSALSTSQAALQVTGNNIANVDTEGYSKQTLITKDGSYVSGSAGQLGSGVVAQEVVRS 69 Query: 65 YLSKEVGSFISTGTELD 81 + ++ GT D Sbjct: 70 HDQFIEAQYLQRGTARD 86 >gi|150395483|ref|YP_001325950.1| flagellar basal body rod protein FlgC [Sinorhizobium medicae WSM419] gi|150026998|gb|ABR59115.1| flagellar basal-body rod protein FlgC [Sinorhizobium medicae WSM419] Length = 139 Score = 51.0 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 14/99 (14%), Positives = 32/99 (32%) Query: 145 KGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNA 204 G + K I+ V E G + + + ++G ++ N Sbjct: 39 PGTDPYRRKTISFAAEVDRASGASLVEVERLGTDDSDFNVEFDPGNPAADEKGMVKLPNV 98 Query: 205 NSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 N + EM M + + + I + + + I + + Sbjct: 99 NILIEMADMREANRAYEANLQTIKQARDLISQTIDLLRA 137 Score = 42.9 bits (99), Expect = 0.033, Method: Composition-based stats. Identities = 11/60 (18%), Positives = 23/60 (38%), Gaps = 10/60 (16%) Query: 1 MQ---TSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKN 50 M ++ + + A RL V++N++N + G +R + F+ V Sbjct: 1 MDPLTSALKVSASGLQAESTRLRIVSENIANARSTGDAPGTDPYRRKTISFAAEVDRASG 60 >gi|28275264|ref|NP_783519.1| flagellar hook-associated protein [Shewanella oneidensis MR-1] Length = 386 Score = 51.0 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 13/80 (16%), Positives = 30/80 (37%), Gaps = 1/80 (1%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA-IKNDIDQKISFVA 60 NI LA + +L ++N++N +TVG+ + + + + ++V+ Sbjct: 3 IDLLNIARTGVLASQSQLGVTSNNIANANTVGYHRQVATQTTLDSQRLGSSFYGTGTYVS 62 Query: 61 SGKEYLSKEVGSFISTGTEL 80 K + + G Sbjct: 63 DVKRIYNDYAARELRIGQTT 82 >gi|329849687|ref|ZP_08264533.1| flagellar basal-body rod protein FlgC [Asticcacaulis biprosthecum C19] gi|328841598|gb|EGF91168.1| flagellar basal-body rod protein FlgC [Asticcacaulis biprosthecum C19] Length = 138 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 5/47 (10%), Positives = 20/47 (42%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 +G+++ N +++ E M + + + +I+ + + + Sbjct: 90 AQGYVKRPNVDTLTESMDMREAQRAYEANLNVIETARDMNQKILNIL 136 >gi|302874587|ref|YP_003843220.1| flagellar basal-body rod protein FlgC [Clostridium cellulovorans 743B] gi|307690802|ref|ZP_07633248.1| flagellar basal body rod protein FlgC [Clostridium cellulovorans 743B] gi|302577444|gb|ADL51456.1| flagellar basal-body rod protein FlgC [Clostridium cellulovorans 743B] Length = 143 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 22/47 (46%), Gaps = 1/47 (2%) Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 +G++ N N + EM +I ++ + + T I + +A+ I Sbjct: 97 QGYVTMPNINILNEMADLIASSRAYEANVTAITAQKGIFTKAL-EIG 142 Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 19/46 (41%), Gaps = 6/46 (13%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43 S I + A R+ V+ N++N +T G ++ F E Sbjct: 6 SMRISSSGLSAERLRMDIVSSNIANVNTTRTEDGGPYKRKIGMFQE 51 >gi|254437430|ref|ZP_05050924.1| conserved domain protein [Octadecabacter antarcticus 307] gi|198252876|gb|EDY77190.1| conserved domain protein [Octadecabacter antarcticus 307] Length = 1436 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 23/50 (46%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50 M + F IG +A A Q L+ N+ N +T G+R +EV G Sbjct: 1 MASLFEIGRSAINAQRQALNVTGQNIVNANTEGYRRRDANLTEVFGVQSE 50 >gi|195952550|ref|YP_002120840.1| flagellar basal-body rod protein FlgC [Hydrogenobaculum sp. Y04AAS1] gi|195932162|gb|ACG56862.1| flagellar basal-body rod protein FlgC [Hydrogenobaculum sp. Y04AAS1] Length = 136 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 20/44 (45%) Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +G++E+ N N EM MI TQ + + + + + I Sbjct: 90 QGYVEEPNINVTTEMVDMITATQSYQANLSAFNMTKNIAQFTIN 133 Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 14/119 (11%), Positives = 42/119 (35%), Gaps = 5/119 (4%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTD---TVG--FRTIKVKFSEVVGAIKNDIDQKIS 57 +F++ + A R++T+A N++N + T G ++ ++ F V Sbjct: 6 NAFDVSASGMYAERIRMNTIASNLANYESYKTDGTPYQKLEPVFQAVYDRNMLSDGLVPV 65 Query: 58 FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVS 116 V+ ++ ++ S + + + ++T ++ ++ Sbjct: 66 NVSEIRQSNGFKLIYDPSNPHANTQGYVEEPNINVTTEMVDMITATQSYQANLSAFNMT 124 >gi|27381986|ref|NP_773515.1| flagellar basal body rod protein FlgC [Bradyrhizobium japonicum USDA 110] gi|27355156|dbj|BAC52140.1| flagellar basal-body rod protein [Bradyrhizobium japonicum USDA 110] Length = 138 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 31/98 (31%) Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNAN 205 G + K I + + G+ + K G+++ N N Sbjct: 41 GADPYQRKTITFDAAMDRASGAQLAKVKEVGVDTTPYRVEYDPGHPAADKSGYVKLPNVN 100 Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 M EM M + + + + ++ + + I + S Sbjct: 101 MMIEMADMREVNRSYEANLQVVKQVRSMLGMTIDLLRS 138 Score = 41.4 bits (95), Expect = 0.10, Method: Composition-based stats. Identities = 10/104 (9%), Positives = 28/104 (26%), Gaps = 8/104 (7%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKN-DIDQK 55 S + + A R+ V++N++N + G ++ + F + + + Sbjct: 8 SLTVASSGLEAQSTRMRIVSENLANATSTGRTAGADPYQRKTITFDAAMDRASGAQLAKV 67 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 Y + + L + + Sbjct: 68 KEVGVDTTPYRVEYDPGHPAADKSGYVKLPNVNMMIEMADMREV 111 >gi|160878463|ref|YP_001557431.1| flagellar hook-associated protein FlgK [Clostridium phytofermentans ISDg] gi|160427129|gb|ABX40692.1| flagellar hook-associated protein FlgK [Clostridium phytofermentans ISDg] Length = 620 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 8/51 (15%), Positives = 19/51 (37%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 +S +G++ + L+T N++N +T G+ + Sbjct: 4 MSSLYVGVSGLQVSQNGLNTTGHNLANVETEGYVRQQTVLQTSQYRTIGQS 54 >gi|120601522|ref|YP_965922.1| hypothetical protein Dvul_0472 [Desulfovibrio vulgaris DP4] gi|120561751|gb|ABM27495.1| protein of unknown function DUF1078 domain protein [Desulfovibrio vulgaris DP4] Length = 125 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 7/35 (20%), Positives = 15/35 (42%) Query: 199 LEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 +E SN ++ EM M+ + + I ++ Sbjct: 82 VEGSNTDTAREMVSMMETQRAHEANVASIRAHDDM 116 Score = 44.1 bits (102), Expect = 0.015, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 30/84 (35%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 + G AA A L A+N++N +T GFR + ++ G + + G Sbjct: 3 IDTGWAALDAFGIGLGVTANNIANVNTDGFRASQTRYETGPGGEGVRVGEIRESTTPGPL 62 Query: 65 YLSKEVGSFISTGTELDFALEGDA 88 + + + +EG Sbjct: 63 HEGMGIVEREGRMEQQRVLVEGSN 86 >gi|94500248|ref|ZP_01306781.1| Flagellar hook-associated protein [Oceanobacter sp. RED65] gi|94427547|gb|EAT12524.1| Flagellar hook-associated protein [Oceanobacter sp. RED65] Length = 991 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 9/52 (17%), Positives = 19/52 (36%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M IG++ + L+ +N++N DT G+ + + Sbjct: 1 MAGILEIGISGLRVHQTALTVTGNNIANVDTEGYSRQDASIVSQNPQFQGGV 52 >gi|288554150|ref|YP_003426085.1| flagellar hook-associated protein FlgK [Bacillus pseudofirmus OF4] gi|288545310|gb|ADC49193.1| flagellar hook-associated protein FlgK [Bacillus pseudofirmus OF4] Length = 523 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 9/40 (22%), Positives = 18/40 (45%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 A + + L T N++N +T G+ +V F++ Sbjct: 7 GLETARRAMMTQQYALHTTGHNIANANTPGYSRQRVNFTQ 46 Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 8/41 (19%), Positives = 16/41 (39%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S+ + EM MI +N+ I ++ + I + Sbjct: 479 SSVSLDEEMTDMIKFQHAYNAAARNITMVDEMLDRIINGLG 519 >gi|152965588|ref|YP_001361372.1| flagellar hook-associated protein FlgK [Kineococcus radiotolerans SRS30216] gi|151360105|gb|ABS03108.1| flagellar hook-associated protein FlgK [Kineococcus radiotolerans SRS30216] Length = 482 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 23/53 (43%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK 55 + N A A ++ + T N++N +T G+ +V+ S V QK Sbjct: 5 SGINTASRALGAAQRGMETTGQNIANVNTPGYSRQRVEQSSSVLNQTGQFTQK 57 Score = 44.9 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 4/41 (9%), Positives = 17/41 (41%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N EM ++ +++ ++ ++++ + + Sbjct: 442 SGVNLDEEMTNLVAYQHAYSAAAKVLTTMDEALQSLLNMVR 482 >gi|149375037|ref|ZP_01892810.1| Flagellar basal body protein [Marinobacter algicola DG893] gi|149360926|gb|EDM49377.1| Flagellar basal body protein [Marinobacter algicola DG893] Length = 132 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 14/103 (13%), Positives = 32/103 (31%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + I A +R +A+N++N DT G++ V F ++ ++ + Sbjct: 6 DKALGIHQHALEGRIKRAEVLANNLANADTPGYKARDVDFQAMMQKAQDSMSGFGMTRTH 65 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDG 104 + +G+ + D R+ Sbjct: 66 ESHMDTSSMGADSELLYRVPHQPSVDGNTVDAQQEQTRFMRNA 108 >gi|77464908|ref|YP_354412.1| flagellar basal body rod protein FlgC [Rhodobacter sphaeroides 2.4.1] gi|221640829|ref|YP_002527091.1| flagellar basal body rod protein FlgC [Rhodobacter sphaeroides KD131] gi|77389326|gb|ABA80511.1| putative flagellar basal-body rod protein FlgC [Rhodobacter sphaeroides 2.4.1] gi|221161610|gb|ACM02590.1| flagellar basal-body rod protein FlgC [Rhodobacter sphaeroides KD131] Length = 128 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 20/42 (47%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 S + + + RL V++N++N DT G+ V F E Sbjct: 7 LQSLGLSASGMRSQALRLRHVSENIANADTPGYHRKTVSFQE 48 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 8/79 (10%), Positives = 25/79 (31%) Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223 D G V + + + + G+ + SN + + E+ + + + Sbjct: 49 DPDSGLVSTGPVRLDRSELQKIYAPGHPLAGEDGYYDGSNVDLVVEIADAREAQRSYEAN 108 Query: 224 TTLIDENEKSMLEAIRNIA 242 + D+ + + + Sbjct: 109 LRMFDQARQMTQSLLDLLR 127 >gi|225181620|ref|ZP_03735061.1| flagellar hook-associated protein FlgK [Dethiobacter alkaliphilus AHT 1] gi|225167728|gb|EEG76538.1| flagellar hook-associated protein FlgK [Dethiobacter alkaliphilus AHT 1] Length = 494 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 20/61 (32%), Gaps = 1/61 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS-EVVGAIKNDIDQKISFVASG 62 NI A ++ L A N++N +T G+ S N S V Sbjct: 6 GLNISRLGMQAQQKALEVTAHNVANANTPGYSRQVAGMSTTTPLPYPNGQGMLGSGVKVS 65 Query: 63 K 63 + Sbjct: 66 Q 66 Score = 44.1 bits (102), Expect = 0.017, Method: Composition-based stats. Identities = 6/40 (15%), Positives = 14/40 (35%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 S + EM M+ + + +I ++ I + Sbjct: 453 SGVSIDEEMANMVQFQLSYQASARVITTLDEIYDTLINRM 492 >gi|154250318|ref|YP_001411143.1| flagellar hook-associated protein FlgK [Fervidobacterium nodosum Rt17-B1] gi|154154254|gb|ABS61486.1| flagellar hook-associated protein FlgK [Fervidobacterium nodosum Rt17-B1] Length = 847 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 13/85 (15%), Positives = 32/85 (37%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 N GL A + ++ VA N++N +T GF + + + + Q + G Sbjct: 10 LNTGLLGVYASKLAMNVVAHNIANANTPGFSRQRPELLTMPPIPITSLTQPAVPLQIGTG 69 Query: 65 YLSKEVGSFISTGTELDFALEGDAW 89 +++ ++ + + + Sbjct: 70 VYVRDIKRVRDAFLDIQYRQTNNKY 94 Score = 48.7 bits (114), Expect = 6e-04, Method: Composition-based stats. Identities = 8/39 (20%), Positives = 15/39 (38%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 + EM MI Q FN+ ++ + + I + Sbjct: 805 VSLDEEMANMIKYQQAFNAAARVMTAVDDMISRVIDKLG 843 >gi|296330833|ref|ZP_06873308.1| flagellar basal body rod protein FlgC [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305674351|ref|YP_003866023.1| flagellar component of cell-proximal portion of basal-body rod [Bacillus subtilis subsp. spizizenii str. W23] gi|296151838|gb|EFG92712.1| flagellar basal body rod protein FlgC [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305412595|gb|ADM37714.1| flagellar component of cell-proximal portion of basal-body rod [Bacillus subtilis subsp. spizizenii str. W23] Length = 150 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 14/108 (12%), Positives = 42/108 (38%), Gaps = 3/108 (2%) Query: 131 IQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS 190 +P + ++ ++ KGE G + + N+ P + + Sbjct: 42 EWMPYRRKMVSLQSKGESFSSILNSQMSGSGNAGNGVKVSKITEDDSEFNLVYDPTDPDA 101 Query: 191 GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G+++ N + + EM ++ T+ + + T ++ + +++A+ Sbjct: 102 NAE---GYVQKPNVDPLKEMVDLVSSTRSYEANVTAMNATKGMLMKAL 146 Score = 44.9 bits (104), Expect = 0.009, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 38/113 (33%), Gaps = 17/113 (15%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTV------G----FRTIKV-------KFSEVVG 46 S N+ +A A R+ V+ N++N DT G +R V FS ++ Sbjct: 6 SLNVSASALTAQRVRMDVVSSNLANMDTTRAKQVNGEWMPYRRKMVSLQSKGESFSSILN 65 Query: 47 AIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 + + + V K + + T+ D EG P + Sbjct: 66 SQMSGSGNAGNGVKVSKITEDDSEFNLVYDPTDPDANAEGYVQKPNVDPLKEM 118 >gi|285018203|ref|YP_003375914.1| flagellar hook-associated protein 1 (hap1) [Xanthomonas albilineans GPE PC73] gi|283473421|emb|CBA15926.1| probable flagellar hook-associated protein 1 (hap1) [Xanthomonas albilineans] Length = 624 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 25/50 (50%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51 + + G A LA ++ L TV+ N++N +T G+ + F+ V + Sbjct: 1 MSVMSTGTGALLAFQRALQTVSHNVANANTNGYSRQRASFATNVPNQFGN 50 Score = 41.8 bits (96), Expect = 0.074, Method: Composition-based stats. Identities = 20/164 (12%), Positives = 46/164 (28%), Gaps = 3/164 (1%) Query: 79 ELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDE 138 + A + ++ T ++ +G ++ GK D +V P + Sbjct: 464 PSNIAFVDATHYTIDGTGPFAYT--AGQTISANGWSLTLDGKPSSGDSFAVSPTGPGSSD 521 Query: 139 IFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGF 198 N + K + + G S + +++ + Sbjct: 522 NGNAQLLSHL-DDAKALNGGTITLNGAVSGLSTTIGSAARQAQYSSDAQNVIQSNAQDAR 580 Query: 199 LEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E M+ L Q + + + +I + + I Sbjct: 581 DSLSGVNLDEEAANMLQLQQAYEAASHIISTADTMFQSILSAIR 624 >gi|326796599|ref|YP_004314419.1| flagellar basal-body rod protein FlgC [Marinomonas mediterranea MMB-1] gi|326547363|gb|ADZ92583.1| flagellar basal-body rod protein FlgC [Marinomonas mediterranea MMB-1] Length = 149 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N + EM M+ ++ F + +++ + M + + Sbjct: 103 GYVFYPNVNPVEEMADMMSASRSFQTNVEVMNSAKSMMQKMLS 145 Score = 39.5 bits (90), Expect = 0.44, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 37/93 (39%), Gaps = 6/93 (6%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQK 55 F I +A A RL+TVA N++N D+V +R K F+E++ + + Sbjct: 4 NNIFAISGSAMSAQTIRLNTVASNIANVDSVASSVDETYRARKPVFAEMMEESMRERGWR 63 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDA 88 + + +V + + L E D Sbjct: 64 DVSDDDLQSGVGVQVAGIVESDAPLQPRYEPDH 96 >gi|78485814|ref|YP_391739.1| flagellar basal-body rod protein FlgC [Thiomicrospira crunogena XCL-2] gi|78364100|gb|ABB42065.1| Flagellar basal-body rod protein FlgC [Thiomicrospira crunogena XCL-2] Length = 136 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 24/43 (55%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N + EM M+ ++ + + +++ +++ +L I+ Sbjct: 91 GYIYRPNVNVVEEMANMMSASRSYETNIEVLNTSKQLLLRTIQ 133 Score = 38.7 bits (88), Expect = 0.81, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 26/64 (40%), Gaps = 6/64 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQ 54 M + +I A RL+T+A NM+N D++ +R+ + F ++ Sbjct: 3 MFPTLDISATGMHAQTVRLNTIASNMANVDSISSNSDETYRSKQPVFKTIMDNETGRPAG 62 Query: 55 KISF 58 + Sbjct: 63 GVMV 66 >gi|66768556|ref|YP_243318.1| flagellar hook-associated protein FlgK [Xanthomonas campestris pv. campestris str. 8004] gi|66573888|gb|AAY49298.1| flagellar protein [Xanthomonas campestris pv. campestris str. 8004] Length = 624 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 27/42 (64%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 + + G +A +A ++ LSTV+ N++N +T G+ +V+F+ Sbjct: 1 MSIMSTGTSALIAFQRALSTVSHNVANINTEGYSRQRVEFAT 42 >gi|56695104|ref|YP_165451.1| flagellar basal body rod protein FlgC [Ruegeria pomeroyi DSS-3] gi|56676841|gb|AAV93507.1| flagellar basal-body rod protein FlgC [Ruegeria pomeroyi DSS-3] Length = 135 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 15/40 (37%), Positives = 22/40 (55%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS 42 S ++ +A A RL V++N+SN DT G+R V F Sbjct: 11 KSLSVTASALRAQATRLRHVSENISNADTPGYRRKTVPFE 50 Score = 42.9 bits (99), Expect = 0.038, Method: Composition-based stats. Identities = 9/47 (19%), Positives = 20/47 (42%), Gaps = 3/47 (6%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS---MLEAIRN 240 G + SN + M E+ + + + L D+ + ++E +R Sbjct: 89 GHYQGSNVDLMIEIADAREAQRSYEANLKLFDQARQMSASLMELLRK 135 >gi|212709490|ref|ZP_03317618.1| hypothetical protein PROVALCAL_00532 [Providencia alcalifaciens DSM 30120] gi|212687828|gb|EEB47356.1| hypothetical protein PROVALCAL_00532 [Providencia alcalifaciens DSM 30120] Length = 134 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 5/43 (11%), Positives = 22/43 (51%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G+++ N +++ EM I ++ + + +++ + + + + Sbjct: 89 GYVKMPNVDTVGEMINTISASRSYQANLEVMNTAKTLLQKTLT 131 Score = 37.2 bits (84), Expect = 2.2, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 7/58 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSEVVGAIKNDID 53 + F+I +A A QRL+ A NM+N VG +R +V F + +N + Sbjct: 4 LSIFDISSSALTAQSQRLNVSASNMANAESVVGPDGEPYRAKQVVFQ-MAPQGRNQVG 60 >gi|197120201|ref|YP_002140628.1| flagellar basal body rod protein FlgC [Geobacter bemidjiensis Bem] gi|197089561|gb|ACH40832.1| flagellar basal body rod protein FlgC [Geobacter bemidjiensis Bem] Length = 145 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 20/42 (47%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N N + EM MI ++ + + T ++ L+ + Sbjct: 100 GYVAYPNINVVEEMADMITASRSYEANITATQASKSMALKTL 141 Score = 41.0 bits (94), Expect = 0.15, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 28/77 (36%), Gaps = 8/77 (10%) Query: 1 MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDI 52 M TS +I A A R++ ++ N++N ++ G +R F+ Sbjct: 1 MDFFTSMDISATALAAERTRMNLISSNLANVNSTRTAEGGPYRRKDAVFTATPLKEGASF 60 Query: 53 DQKISFVASGKEYLSKE 69 +S S + + Sbjct: 61 GAALSQATSARSVQVTQ 77 >gi|304310784|ref|YP_003810382.1| Flagellar basal-body rod protein FlgB [gamma proteobacterium HdN1] gi|301796517|emb|CBL44725.1| Flagellar basal-body rod protein FlgB [gamma proteobacterium HdN1] Length = 135 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 27/55 (49%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65 A +R +++N++N DT GFR V F +V+G + D S V + + Sbjct: 15 AMELRGRRAEILSNNLANGDTPGFRARDVDFKDVLGGMLGDPSATPSPVTTQSGH 69 >gi|153001466|ref|YP_001367147.1| flagellar hook-associated protein FlgK [Shewanella baltica OS185] gi|151366084|gb|ABS09084.1| flagellar hook-associated protein FlgK [Shewanella baltica OS185] Length = 641 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 28/77 (36%), Gaps = 1/77 (1%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA-IKNDIDQKISFVASGK 63 NI LA + +L ++N++N +T G+ S + + N ++V K Sbjct: 6 LNIARTGVLASQSQLGVTSNNIANANTAGYHRQVATQSTLESQRLGNSFYGTGTYVNDVK 65 Query: 64 EYLSKEVGSFISTGTEL 80 + + G Sbjct: 66 RIYNDYAARELRIGQTT 82 Score = 38.7 bits (88), Expect = 0.75, Method: Composition-based stats. Identities = 4/41 (9%), Positives = 15/41 (36%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E ++ Q + + ++ ++ + ++ Sbjct: 601 SGVNLDEEAANLMRFQQAYQASARIMTTAQQIFDTLLSSVR 641 >gi|21231391|ref|NP_637308.1| flagellar hook-associated protein FlgK [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|188991635|ref|YP_001903645.1| flagellar hook-associated protein FlgK [Xanthomonas campestris pv. campestris str. B100] gi|21113056|gb|AAM41232.1| flagellar protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|167733395|emb|CAP51596.1| Flagellar hook-associated protein 1 (HAP1) [Xanthomonas campestris pv. campestris] Length = 624 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 27/42 (64%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 + + G +A +A ++ LSTV+ N++N +T G+ +V+F+ Sbjct: 1 MSIMSTGTSALIAFQRALSTVSHNVANINTEGYSRQRVEFAT 42 >gi|54297179|ref|YP_123548.1| flagellar basal body rod protein FlgB [Legionella pneumophila str. Paris] gi|148358803|ref|YP_001250010.1| flagellar basal body rod protein FlgB [Legionella pneumophila str. Corby] gi|296106848|ref|YP_003618548.1| flagellar basal-body rod protein FlgB [Legionella pneumophila 2300/99 Alcoy] gi|53750964|emb|CAH12375.1| Flagellar basal-body rod protein FlgB [Legionella pneumophila str. Paris] gi|148280576|gb|ABQ54664.1| flagellar basal body rod protein FlgB [Legionella pneumophila str. Corby] gi|295648749|gb|ADG24596.1| flagellar basal-body rod protein FlgB [Legionella pneumophila 2300/99 Alcoy] Length = 130 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 41/87 (47%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + F I A +A +QR S +A+N++N +T F+ V F+EV+ A Q++ + Sbjct: 6 DSYFGIHAKALIARDQRASVLANNIANVNTPNFKARDVDFNEVLTATMAGNSQQLRVTSD 65 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDA 88 + + + + +L+G+ Sbjct: 66 QHISTNADFMTHLKYRMTHHASLDGNT 92 >gi|258511108|ref|YP_003184542.1| flagellar basal-body rod protein FlgB [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257477834|gb|ACV58153.1| flagellar basal-body rod protein FlgB [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 134 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 10/49 (20%), Positives = 20/49 (40%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 A A R + A+N++N +T G++ V F ++ + Sbjct: 9 NALDASTLRQAVYANNIANAETPGYKRQDVAFETLLQNALSGQASGALG 57 >gi|289606849|emb|CBI60984.1| unnamed protein product [Sordaria macrospora] Length = 336 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 22/128 (17%), Positives = 46/128 (35%), Gaps = 3/128 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV-VGAIKNDIDQKISFV 59 M +IG + A + L+T +DN++N T G+ +EV VG+ + ++ Sbjct: 40 MSDLLSIGASGVRAYQSALTTTSDNIANAGTTGYVRRTTSLAEVGVGSSRQITGSGVTVT 99 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119 + + +++ + G W A +R ++T + + Sbjct: 100 GVARSADIYRSQEVRQSNSDVSRSDGGIVWMARIEDALT--SRALTDRMTAFFNSATTLS 157 Query: 120 KYPVLDMA 127 P D Sbjct: 158 ADPSADAP 165 >gi|255021361|ref|ZP_05293409.1| Flagellar hook-associated protein flgK [Acidithiobacillus caldus ATCC 51756] gi|254969224|gb|EET26738.1| Flagellar hook-associated protein flgK [Acidithiobacillus caldus ATCC 51756] Length = 684 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 8/47 (17%), Positives = 17/47 (36%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51 + L+ + L +N++N +T G+ V S + Sbjct: 8 LSSALSGLQVAQDALQVTGNNIANVNTPGYSQESVVQSSLPTTFLGG 54 >gi|212637783|ref|YP_002314308.1| flagellar basal-body rod protein FlgC [Shewanella piezotolerans WP3] gi|212559267|gb|ACJ31721.1| Flagellar basal-body rod protein FlgC [Shewanella piezotolerans WP3] Length = 139 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 10/48 (20%), Positives = 27/48 (56%), Gaps = 1/48 (2%) Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 +G++ SN N++ EM M+ ++ F + +++ +SM + + + + Sbjct: 92 QGYVAYSNVNTVEEMADMMAASRSFETSVEVMNRA-RSMQQGLLQLGA 138 Score = 36.4 bits (82), Expect = 3.4, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 6/51 (11%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKND 51 I A A RL+TVA N++N FR +K FS + + Sbjct: 9 IAGAGMNAQTIRLNTVASNLANAGAAAESPDQAFRALKPVFSTIYKQTQEG 59 >gi|317178281|dbj|BAJ56070.1| flagellar basal body rod protein FlgC [Helicobacter pylori F16] Length = 161 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 8/44 (18%), Positives = 19/44 (43%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 +G++ N N++ EM ++ T+ + + + AI Sbjct: 113 AQGYVAYPNVNAVVEMADLVEATRAYQANVVAFQSAKNMAQNAI 156 Score = 39.1 bits (89), Expect = 0.52, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 6/49 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44 +SF+I A R + ++ N++N +T G +R + F Sbjct: 3 LSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFKAF 51 >gi|332701538|ref|ZP_08421626.1| flagellar hook-associated protein FlgK [Desulfovibrio africanus str. Walvis Bay] gi|332551687|gb|EGJ48731.1| flagellar hook-associated protein FlgK [Desulfovibrio africanus str. Walvis Bay] Length = 696 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 22/192 (11%), Positives = 52/192 (27%), Gaps = 16/192 (8%) Query: 1 MQTSFN-IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE------VVGAIKNDID 53 M ++ IG A L + ++ +NM+N +T G+ V F+ G + N Sbjct: 1 MISNLYYIGANALLNYQTAINVTGNNMANAETAGYSRRTVDFATRTTTDKYYGQVGNGSI 60 Query: 54 QKISFVASGKEYLSKEVGSFISTGTE----LDFALEGDAWFALESPRGII-----LTRDG 104 + + +G + + + +E T Sbjct: 61 IQAIRRNYDSYLEDQYLGQSADSTYWSTVTSNCTAIESLFVQVEDDGLSAVLDSLWTGFE 120 Query: 105 RFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 G+ + + + EI + + + + Sbjct: 121 ALPSDPGGTANRTELLGTAESLTGMLNDLYADMRSEEERMNAEIRDQVNEVNDILGQLAE 180 Query: 165 MSQGFVRRENSG 176 +++G V + Sbjct: 181 VNKGLVAHPENA 192 Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats. Identities = 5/36 (13%), Positives = 12/36 (33%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 N E+ + L +++ LI + + Sbjct: 658 VNVNEEVVNLTRLQDAYDAAAKLITTANEMFETVLS 693 >gi|291519599|emb|CBK74820.1| flagellar basal-body rod protein FlgC [Butyrivibrio fibrisolvens 16/4] Length = 151 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 20/43 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N++ EM +I ++ + + T D + I+ Sbjct: 105 GYVRYPNVNTVTEMTNLIDASRSYEANVTAFDAIKSMAGYGIQ 147 Score = 45.6 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 34/86 (39%), Gaps = 6/86 (6%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDIDQKISF 58 F+I A R+ +A+N++N T G +R V F+E + + Sbjct: 7 FDIVATGLTAQRFRMDIIAENIANVSTTRTQNGGPYRRKIVTFTEKNYHAGIPNFKNVLK 66 Query: 59 VASGKEYLSKEVGSFISTGTELDFAL 84 + Y + S +S TE DF + Sbjct: 67 DKQLRFYGNGVKVSKVSEDTETDFIM 92 >gi|329898292|ref|ZP_08272375.1| Flagellar basal-body rod protein FlgB [gamma proteobacterium IMCC3088] gi|328920857|gb|EGG28300.1| Flagellar basal-body rod protein FlgB [gamma proteobacterium IMCC3088] Length = 124 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 26/50 (52%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50 M + F + A + QRL +A N++N DT GF+ V F +V+ A Sbjct: 1 MNSIFGVHEQALVLKSQRLQVLAKNIANADTPGFKARDVDFKQVLAAQAG 50 >gi|34557980|ref|NP_907795.1| flagellar basal body rod protein FlgC [Wolinella succinogenes DSM 1740] gi|34483698|emb|CAE10695.1| FLAGELLAR BASAL-BODY ROD PROTEIN FLGC PROXIMAL ROD PROTEIN [Wolinella succinogenes] Length = 164 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 18/43 (41%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N + EM +I T+ + + + + A+ Sbjct: 118 GYVAYPNINPVVEMADLIEATRAYQANVSAFQSAKNMASTALT 160 Score = 41.0 bits (94), Expect = 0.14, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 23/49 (46%), Gaps = 6/49 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44 +SF+I A R++ ++ N++N +T G +R +V F Sbjct: 4 LSSFDISGYGLSAQRFRVNMISSNIANANTTRTDEGGPYRRKEVIFKAF 52 >gi|120598238|ref|YP_962812.1| flagellar hook-associated protein FlgK [Shewanella sp. W3-18-1] gi|120558331|gb|ABM24258.1| flagellar hook-associated protein FlgK [Shewanella sp. W3-18-1] Length = 641 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 27/80 (33%), Gaps = 1/80 (1%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA-IKNDIDQKISFVA 60 NI LA + +L ++N++N +T G+ S + N ++V Sbjct: 3 IDLLNIARTGVLASQSQLGVTSNNIANANTAGYHRQVATQSTLESQRFGNSFYGTGTYVD 62 Query: 61 SGKEYLSKEVGSFISTGTEL 80 K + + G Sbjct: 63 DVKRIYNDYAARELRIGQTT 82 Score = 38.7 bits (88), Expect = 0.69, Method: Composition-based stats. Identities = 4/41 (9%), Positives = 15/41 (36%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E ++ Q + + ++ ++ + ++ Sbjct: 601 SGVNLDEEAANLMRFQQAYQASARIMTTAQQIFDTLLTSVR 641 >gi|304409972|ref|ZP_07391591.1| flagellar hook-associated protein FlgK [Shewanella baltica OS183] gi|307302315|ref|ZP_07582073.1| flagellar hook-associated protein FlgK [Shewanella baltica BA175] gi|304351381|gb|EFM15780.1| flagellar hook-associated protein FlgK [Shewanella baltica OS183] gi|306914353|gb|EFN44774.1| flagellar hook-associated protein FlgK [Shewanella baltica BA175] Length = 641 Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 28/77 (36%), Gaps = 1/77 (1%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA-IKNDIDQKISFVASGK 63 NI LA + +L ++N++N +T G+ S + + N ++V K Sbjct: 6 LNIARTGVLASQSQLGVTSNNIANANTAGYHRQVATQSTLESQRLGNSFYGTGTYVNDVK 65 Query: 64 EYLSKEVGSFISTGTEL 80 + + G Sbjct: 66 RIYNDYAARELRIGQTT 82 Score = 38.3 bits (87), Expect = 0.82, Method: Composition-based stats. Identities = 4/41 (9%), Positives = 15/41 (36%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E ++ Q + + ++ ++ + ++ Sbjct: 601 SGVNLDEEAANLMRFQQAYQASARIMTTAQQIFDTLLSSVR 641 >gi|160876197|ref|YP_001555513.1| flagellar hook-associated protein FlgK [Shewanella baltica OS195] gi|160861719|gb|ABX50253.1| flagellar hook-associated protein FlgK [Shewanella baltica OS195] gi|315268387|gb|ADT95240.1| flagellar hook-associated protein FlgK [Shewanella baltica OS678] Length = 641 Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 28/77 (36%), Gaps = 1/77 (1%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA-IKNDIDQKISFVASGK 63 NI LA + +L ++N++N +T G+ S + + N ++V K Sbjct: 6 LNIARTGVLASQSQLGVTSNNIANANTAGYHRQVATQSTLESQRLGNSFYGTGTYVNDVK 65 Query: 64 EYLSKEVGSFISTGTEL 80 + + G Sbjct: 66 RIYNDYAARELRIGQTT 82 Score = 38.3 bits (87), Expect = 0.82, Method: Composition-based stats. Identities = 4/41 (9%), Positives = 15/41 (36%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E ++ Q + + ++ ++ + ++ Sbjct: 601 SGVNLDEEAANLMRFQQAYQASARIMTTAQQIFDTLLSSVR 641 >gi|126175140|ref|YP_001051289.1| flagellar hook-associated protein FlgK [Shewanella baltica OS155] gi|125998345|gb|ABN62420.1| flagellar hook-associated protein FlgK [Shewanella baltica OS155] Length = 641 Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 28/77 (36%), Gaps = 1/77 (1%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA-IKNDIDQKISFVASGK 63 NI LA + +L ++N++N +T G+ S + + N ++V K Sbjct: 6 LNIARTGVLASQSQLGVTSNNIANANTAGYHRQVATQSTLESQRLGNSFYGTGTYVNDVK 65 Query: 64 EYLSKEVGSFISTGTEL 80 + + G Sbjct: 66 RIYNDYAARELRIGQTT 82 Score = 38.3 bits (87), Expect = 0.83, Method: Composition-based stats. Identities = 4/41 (9%), Positives = 15/41 (36%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E ++ Q + + ++ ++ + ++ Sbjct: 601 SGVNLDEEAANLMRFQQAYQASARIMTTAQQIFDTLLSSVR 641 >gi|325982373|ref|YP_004294775.1| flagellar basal-body rod protein FlgC [Nitrosomonas sp. AL212] gi|325531892|gb|ADZ26613.1| flagellar basal-body rod protein FlgC [Nitrosomonas sp. AL212] Length = 133 Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 6/44 (13%), Positives = 21/44 (47%) Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N + EM M+ ++ + + +++ + + + + Sbjct: 87 SGYVTMPNVNVVDEMVNMMSASRSYQNSVDMMNTTKSLLQKTLT 130 Score = 40.6 bits (93), Expect = 0.20, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 39/118 (33%), Gaps = 6/118 (5%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNT----DTVG--FRTIKVKFSEVVGAIKNDIDQKI 56 F I +A A QRL+ VA N+SN + G +R +V FS + K+ Sbjct: 4 NVFGIASSAMSAQSQRLNVVASNLSNADSVTSSTGEPYRGRQVVFSTLRADANGAAGVKV 63 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSL 114 + V + + + + E + +R + V + Sbjct: 64 AGVIHDPSPMRQVFEPNHPFANTSGYVTMPNVNVVDEMVNMMSASRSYQNSVDMMNTT 121 >gi|78358192|ref|YP_389641.1| flagellar hook-associated protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78220597|gb|ABB39946.1| Flagellar hook-associated protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 696 Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 10/77 (12%), Positives = 28/77 (36%), Gaps = 2/77 (2%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE--VVGAIKNDIDQKISFV 59 + ++G A A + + T +N++N +T G+ V+F + + + Sbjct: 4 NSLLSVGKDALFASQSAIQTTGNNIANVNTPGYSRQAVRFEAKTPIDWKPGQMGTGVKAA 63 Query: 60 ASGKEYLSKEVGSFIST 76 + + + + Sbjct: 64 EVFRYFNTFIEQEYHDH 80 Score = 39.5 bits (90), Expect = 0.38, Method: Composition-based stats. Identities = 4/35 (11%), Positives = 13/35 (37%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 N EM ++ + + L+ ++ + + Sbjct: 658 VNLDEEMSSLVKFQHSYKAAAKLVTTADEMLQVLL 692 >gi|15964413|ref|NP_384766.1| flagellar basal body rod protein FlgC [Sinorhizobium meliloti 1021] gi|307311555|ref|ZP_07591196.1| flagellar basal-body rod protein FlgC [Sinorhizobium meliloti BL225C] gi|307318910|ref|ZP_07598341.1| flagellar basal-body rod protein FlgC [Sinorhizobium meliloti AK83] gi|17380478|sp|Q52944|FLGC_RHIME RecName: Full=Flagellar basal-body rod protein flgC gi|15073590|emb|CAC45232.1| Flagellar basal-body rod protein [Sinorhizobium meliloti 1021] gi|306895324|gb|EFN26079.1| flagellar basal-body rod protein FlgC [Sinorhizobium meliloti AK83] gi|306899572|gb|EFN30201.1| flagellar basal-body rod protein FlgC [Sinorhizobium meliloti BL225C] Length = 139 Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 14/99 (14%), Positives = 33/99 (33%) Query: 145 KGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNA 204 G + K I+ V E G + + + ++G ++ N Sbjct: 39 PGADPFRRKTISFAAEVDRASGASLVEVERLGTDDSDFNIEFDPGNPAADEKGMVKLPNV 98 Query: 205 NSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 N + EM M + + + I ++ + + I + + Sbjct: 99 NILIEMADMREANRAYEANLQTIKQSRDLISQTIDLLRA 137 Score = 43.7 bits (101), Expect = 0.022, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 23/60 (38%), Gaps = 10/60 (16%) Query: 1 MQ---TSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKN 50 M ++ + + A RL V++N++N + G FR + F+ V Sbjct: 1 MDPLTSALKVSASGLQAESTRLRIVSENIANARSTGDAPGADPFRRKTISFAAEVDRASG 60 >gi|114046844|ref|YP_737394.1| flagellar hook-associated protein FlgK [Shewanella sp. MR-7] gi|113888286|gb|ABI42337.1| flagellar hook-associated protein FlgK [Shewanella sp. MR-7] Length = 641 Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 13/80 (16%), Positives = 29/80 (36%), Gaps = 1/80 (1%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA-IKNDIDQKISFVA 60 NI LA + +L ++N++N +T G+ + + + N ++V+ Sbjct: 3 IDLLNIARTGVLASQSQLGVTSNNIANANTAGYHRQVATQTTLDSQRLGNSFYGTGTYVS 62 Query: 61 SGKEYLSKEVGSFISTGTEL 80 K + + G Sbjct: 63 DVKRIYNDYAARELRIGQTT 82 Score = 38.7 bits (88), Expect = 0.74, Method: Composition-based stats. Identities = 4/41 (9%), Positives = 15/41 (36%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E ++ Q + + ++ ++ + ++ Sbjct: 601 SGVNLDEEAANLMRFQQAYQASARIMSTAQQIFDTLLTSVR 641 >gi|322421737|ref|YP_004200960.1| flagellar basal-body rod protein FlgC [Geobacter sp. M18] gi|320128124|gb|ADW15684.1| flagellar basal-body rod protein FlgC [Geobacter sp. M18] Length = 145 Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 9/46 (19%), Positives = 20/46 (43%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G++ N N + EM MI ++ + + T + L+ + + Sbjct: 100 GYVAYPNINVVEEMADMITASRSYEANITATQAAKSMALKTLDLLR 145 Score = 41.4 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 13/82 (15%), Positives = 29/82 (35%), Gaps = 8/82 (9%) Query: 1 MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDI 52 M TS +I +A A R++ ++ N++N ++ G +R F+ Sbjct: 1 MDFFTSMDISASALAAERTRMNLISSNLANVNSTRTAEGGPYRRKDAVFTATPVTEGKSF 60 Query: 53 DQKISFVASGKEYLSKEVGSFI 74 +S + ++ Sbjct: 61 GAALSRANEARSVQVTQINEDQ 82 >gi|284007175|emb|CBA72461.1| flagellar basal body rod protein FlgC [Arsenophonus nasoniae] Length = 135 Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 7/45 (15%), Positives = 21/45 (46%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +RG++ N + EM I ++ + + +++ + M + + Sbjct: 88 QRGYIRKPNVDVTAEMINPISASRSYQANIEVMNTTKSLMQKTLT 132 >gi|256833244|ref|YP_003161971.1| flagellar basal-body rod protein FlgB [Jonesia denitrificans DSM 20603] gi|256686775|gb|ACV09668.1| flagellar basal-body rod protein FlgB [Jonesia denitrificans DSM 20603] Length = 113 Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 35/80 (43%), Gaps = 1/80 (1%) Query: 2 QTSFNIGL-AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 + + L +A L QR +A+N++N +T F +V+F + + + ++ Sbjct: 3 DSVTYVALNSALDGLAQRQRVIANNVANINTPNFHAQRVQFEDELSRQVQRGNGAVTPTV 62 Query: 61 SGKEYLSKEVGSFISTGTEL 80 ++ G+ ++ TE Sbjct: 63 QRSLEPTRLDGNNVNLDTET 82 >gi|296534150|ref|ZP_06896646.1| flagellar basal-body rod protein FlgC [Roseomonas cervicalis ATCC 49957] gi|296265526|gb|EFH11655.1| flagellar basal-body rod protein FlgC [Roseomonas cervicalis ATCC 49957] Length = 136 Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 17/136 (12%), Positives = 43/136 (31%) Query: 108 VTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 + + +L ++ + + G + K + + Sbjct: 1 MDLERALSVSASGMSAQSARLRVVAENVANRDSTGETPGAEPYRRKTVTFANRLDRALGA 60 Query: 168 GFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 VR G + P + RG++ N +SM EM M + +++ +++ Sbjct: 61 ETVRVARIGTAAGNFPEQYDPQHPAADARGYVRKPNVDSMVEMMDMREAQRSYSANLSVL 120 Query: 228 DENEKSMLEAIRNIAS 243 + + AI + + Sbjct: 121 ETTRAMIQRAIDLLRA 136 Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 17/119 (14%), Positives = 39/119 (32%), Gaps = 13/119 (10%) Query: 1 MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFS----EVVGA 47 M + ++ + A RL VA+N++N D+ G +R V F+ +GA Sbjct: 1 MDLERALSVSASGMSAQSARLRVVAENVANRDSTGETPGAEPYRRKTVTFANRLDRALGA 60 Query: 48 IKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106 + + + + E + + + G ++ + + Sbjct: 61 ETVRVARIGTAAGNFPEQYDPQHPAADARGYVRKPNVDSMVEMMDMREAQRSYSANLSV 119 >gi|283780143|ref|YP_003370898.1| flagellar hook-associated protein FlgK [Pirellula staleyi DSM 6068] gi|283438596|gb|ADB17038.1| flagellar hook-associated protein FlgK [Pirellula staleyi DSM 6068] Length = 565 Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 11/82 (13%), Positives = 26/82 (31%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 ++ I + +A + L V +N++N +T G+ +V + + + Sbjct: 4 LSTLQIANNSLIASQLGLQVVGNNIANANTPGYIRQQVVLTPAPTQRYGGLLLGLGVEVQ 63 Query: 62 GKEYLSKEVGSFISTGTELDFA 83 + D A Sbjct: 64 AVIQQTDRFLEERLRSALSDLA 85 Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 10/55 (18%), Positives = 18/55 (32%), Gaps = 5/55 (9%) Query: 190 SGVTVKRGFLED-----SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G V + LE + N E +MI + F + +I + + Sbjct: 510 EGYRVFQNTLEGQLLAITGVNLDEEAVRMIQYQRTFQASARVISTINDLLEVLVN 564 >gi|15616944|ref|NP_240157.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219682252|ref|YP_002468636.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|11386805|sp|P57420|FLGC_BUCAI RecName: Full=Flagellar basal-body rod protein flgC gi|25298910|pir||C84969 flagellar basal-body rod protein flgC [imported] - Buchnera sp. (strain APS) gi|10039009|dbj|BAB13043.1| flagellar basal-body rod protein flgC [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219621985|gb|ACL30141.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|311086076|gb|ADP66158.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311086647|gb|ADP66728.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] gi|311087233|gb|ADP67313.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] gi|311087752|gb|ADP67831.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 136 Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 20/43 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ SN N + EM I + + + ++ + +++ + Sbjct: 91 GYILASNVNPITEMVNNIAAARSYQANIEVLKTAKSMIMKTLT 133 Score = 41.8 bits (96), Expect = 0.078, Method: Composition-based stats. Identities = 11/34 (32%), Positives = 21/34 (61%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFR 35 FNI +A +A Q+L+ +A N++N D+ ++ Sbjct: 4 LNIFNIAGSAMIAQSQKLNVIASNLANMDSTIYK 37 >gi|302669847|ref|YP_003829807.1| flagellar hook-associated protein FlgK2 [Butyrivibrio proteoclasticus B316] gi|302394320|gb|ADL33225.1| flagellar hook-associated protein FlgK2 [Butyrivibrio proteoclasticus B316] Length = 615 Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 12/37 (32%), Positives = 19/37 (51%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 NI + A L+T A+N++N +T G+ KV Sbjct: 7 GLNIAASGLRASNASLNTTANNIANANTDGYSRQKVT 43 >gi|219681697|ref|YP_002468083.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|257471393|ref|ZP_05635392.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|219624540|gb|ACL30695.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] Length = 136 Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 20/43 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ SN N + EM I + + + ++ + +++ + Sbjct: 91 GYILASNVNPITEMVNNIAAARSYQANIEVLKTAKSMIMKTLT 133 Score = 41.8 bits (96), Expect = 0.078, Method: Composition-based stats. Identities = 11/34 (32%), Positives = 21/34 (61%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFR 35 FNI +A +A Q+L+ +A N++N D+ ++ Sbjct: 4 LNIFNIAGSAMIAQSQKLNVIASNLANMDSTIYK 37 >gi|217972604|ref|YP_002357355.1| flagellar hook-associated protein FlgK [Shewanella baltica OS223] gi|217497739|gb|ACK45932.1| flagellar hook-associated protein FlgK [Shewanella baltica OS223] Length = 641 Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 28/77 (36%), Gaps = 1/77 (1%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA-IKNDIDQKISFVASGK 63 NI LA + +L ++N++N +T G+ S + + N ++V K Sbjct: 6 LNIARTGVLASQSQLGVTSNNIANANTAGYHRQVATQSTLESQRLGNSFYGTGTYVNDVK 65 Query: 64 EYLSKEVGSFISTGTEL 80 + + G Sbjct: 66 RIYNDYAARELRIGQTT 82 Score = 38.3 bits (87), Expect = 0.84, Method: Composition-based stats. Identities = 4/41 (9%), Positives = 15/41 (36%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E ++ Q + + ++ ++ + ++ Sbjct: 601 SGVNLDEEAANLMRFQQAYQASARIMTTAQQIFDTLLSSVR 641 >gi|326389602|ref|ZP_08211168.1| flagellar hook-associated protein FlgK [Thermoanaerobacter ethanolicus JW 200] gi|325994317|gb|EGD52743.1| flagellar hook-associated protein FlgK [Thermoanaerobacter ethanolicus JW 200] Length = 482 Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 7/54 (12%), Positives = 17/54 (31%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56 I ++ L N++N +T G+ V + + + + Sbjct: 5 QGLEIAKTGLFVSQKALDVTGHNIANANTPGYTRQVVDMASIAPPTTFGMYDQW 58 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 6/41 (14%), Positives = 16/41 (39%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S + EM M+ + + + +I ++ + I + Sbjct: 438 SGVSLDEEMTNMLKYQKSYVASARVITVMDELLDTLINRMG 478 >gi|113969612|ref|YP_733405.1| flagellar hook-associated protein FlgK [Shewanella sp. MR-4] gi|113884296|gb|ABI38348.1| flagellar hook-associated protein FlgK [Shewanella sp. MR-4] Length = 641 Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 13/80 (16%), Positives = 29/80 (36%), Gaps = 1/80 (1%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA-IKNDIDQKISFVA 60 NI LA + +L ++N++N +T G+ + + + N ++V+ Sbjct: 3 IDLLNIARTGVLASQSQLGVTSNNIANANTAGYHRQVATQTTLDSQRLGNSFYGTGTYVS 62 Query: 61 SGKEYLSKEVGSFISTGTEL 80 K + + G Sbjct: 63 DVKRIYNDYAARELRIGQTT 82 Score = 38.7 bits (88), Expect = 0.77, Method: Composition-based stats. Identities = 4/41 (9%), Positives = 15/41 (36%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E ++ Q + + ++ ++ + ++ Sbjct: 601 SGVNLDEEAANLMRFQQAYQASARIMSTAQQIFDTLLTSVR 641 >gi|255023253|ref|ZP_05295239.1| flagellar hook protein FlgE [Listeria monocytogenes FSL J1-208] Length = 243 Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 12/78 (15%), Positives = 22/78 (28%), Gaps = 5/78 (6%) Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDL-----SGVTVKRGFLEDSNANSMY 208 +A + + + G V+ N P + + LE SN + Sbjct: 160 PVAQLAVATFSNEDGLVKMGNGEYVPGLSSGDAVYGVAGQNGAGGISGSSLEGSNVDLSR 219 Query: 209 EMGQMIHLTQKFNSITTL 226 E ++ F L Sbjct: 220 EFVNLMTYQSGFQGTQKL 237 >gi|298507071|gb|ADI85794.1| flagellar hook-associated protein FlgK [Geobacter sulfurreducens KN400] Length = 477 Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 20/52 (38%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 + +I + A L ++N++N +T G+ F+ + + Sbjct: 4 LSLLDIAKSGITAQRLALEVTSENITNVNTPGYSKQTTVFTTATVSQERGFP 55 Score = 39.1 bits (89), Expect = 0.55, Method: Composition-based stats. Identities = 7/38 (18%), Positives = 14/38 (36%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S + E+ +I + F LI+ + M + Sbjct: 436 QSGVSLDEELANLIKYQKAFEGAAKLINTGTEMMDVIL 473 >gi|260431752|ref|ZP_05785723.1| flagellar basal-body rod protein FlgC [Silicibacter lacuscaerulensis ITI-1157] gi|260415580|gb|EEX08839.1| flagellar basal-body rod protein FlgC [Silicibacter lacuscaerulensis ITI-1157] Length = 128 Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 30/88 (34%), Gaps = 6/88 (6%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV------VGAIKNDIDQKI 56 S + +A A RL V++N+SN DT G+R V F V + + Sbjct: 6 KSLEVTASALRAQAARLRHVSENISNADTPGYRRKTVPFEAVHKDGADLVQAGRVRLDQS 65 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFAL 84 S G+ +D + Sbjct: 66 KLSRIYDPGHPLADESGHYQGSNVDLMI 93 Score = 44.5 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 8/48 (16%), Positives = 20/48 (41%), Gaps = 3/48 (6%) Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS---MLEAIRN 240 G + SN + M E+ + + + + D+ + ++E +R Sbjct: 81 SGHYQGSNVDLMIEIADAREAQRSYEANLKMFDQARQMSSSLMELLRK 128 >gi|254511648|ref|ZP_05123715.1| flagellar basal-body rod protein FlgC [Rhodobacteraceae bacterium KLH11] gi|221535359|gb|EEE38347.1| flagellar basal-body rod protein FlgC [Rhodobacteraceae bacterium KLH11] Length = 128 Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 31/87 (35%), Gaps = 6/87 (6%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV------VGAIKNDIDQKIS 57 S +A A RL V++N+SN DT G+R V F V + + + + Sbjct: 7 SLTASASALRAQAARLRHVSENISNADTPGYRRKTVPFETVKRGGAELVQVGHVKLDRRD 66 Query: 58 FVASGKEYLSKEVGSFISTGTELDFAL 84 + G+ +D + Sbjct: 67 PGQIYDPGHPMADEAGYYRGSNVDLMI 93 Score = 43.7 bits (101), Expect = 0.022, Method: Composition-based stats. Identities = 7/55 (12%), Positives = 19/55 (34%) Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 P + + + G+ SN + M E+ + + + + D+ + Sbjct: 64 RRDPGQIYDPGHPMADEAGYYRGSNVDLMIEIADAREAQRSYEANLKMFDQTRQM 118 >gi|315127347|ref|YP_004069350.1| flagellar hook-associated [Pseudoalteromonas sp. SM9913] gi|315015861|gb|ADT69199.1| flagellar hook-associated [Pseudoalteromonas sp. SM9913] Length = 668 Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 36/93 (38%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 NI + A + L T + N++N +T G+ + +F+ ++ Sbjct: 4 NLLNIANSGIRANSELLQTTSKNIANVNTEGYVRERTEFTTMIDNQVGRGQTYRLLNEFA 63 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESP 95 ++ L+++ + + A D F+ +S Sbjct: 64 QKQLNRDTSNKSFFDQFVSEASRVDQIFSEKSN 96 >gi|52841448|ref|YP_095247.1| flagellar basal body rod protein FlgB [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|54294160|ref|YP_126575.1| flagellar basal body rod protein FlgB [Legionella pneumophila str. Lens] gi|52628559|gb|AAU27300.1| flagellar basal body rod protein FlgB [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|53753992|emb|CAH15463.1| Flagellar basal-body rod protein FlgB [Legionella pneumophila str. Lens] gi|307609974|emb|CBW99503.1| flagellar basal-body rod protein FlgB [Legionella pneumophila 130b] Length = 130 Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 41/87 (47%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + F I A +A +QR S +A+N++N +T F+ V F+EV+ A Q++ + Sbjct: 6 DSYFGIHAKALIARDQRASVLANNIANVNTPNFKARDVDFNEVLTATMAGNSQQLRVTSD 65 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDA 88 + + + + +L+G+ Sbjct: 66 QHINTNADFMTHLKYRMTHHASLDGNT 92 >gi|187934928|ref|YP_001885009.1| flagellar hook-associated protein FlgK [Clostridium botulinum B str. Eklund 17B] gi|187723081|gb|ACD24302.1| flagellar hook-associated protein FlgK [Clostridium botulinum B str. Eklund 17B] Length = 604 Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 7/48 (14%), Positives = 18/48 (37%), Gaps = 5/48 (10%) Query: 199 LED-----SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 LE S + EM +I +++ ++ ++ + I + Sbjct: 555 LEMQKLSVSGVSLDEEMTNLIQFQHAYSANAKVVSTVDELLDVVINGL 602 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 7/34 (20%), Positives = 16/34 (47%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 + + ++T + N++N +TVGF + Sbjct: 10 VAKRGLNVQQGAINTTSHNIANANTVGFSRQRAV 43 >gi|303240291|ref|ZP_07326810.1| flagellar basal-body rod protein FlgB [Acetivibrio cellulolyticus CD2] gi|302592201|gb|EFL61930.1| flagellar basal-body rod protein FlgB [Acetivibrio cellulolyticus CD2] Length = 137 Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 31/84 (36%), Gaps = 6/84 (7%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN------DIDQKISFVASGKE 64 + A R +A N++N DT G++ V F E + + +A G Sbjct: 15 SLDATATRNEVIAQNIANVDTPGYKRKTVSFEEQLSDAISKNSSFKGRRTDPRHIAIGGS 74 Query: 65 YLSKEVGSFISTGTELDFALEGDA 88 + + + LD L+G+ Sbjct: 75 SADEVKINVSEDKSSLDMRLDGNN 98 >gi|117919778|ref|YP_868970.1| flagellar hook-associated protein FlgK [Shewanella sp. ANA-3] gi|117612110|gb|ABK47564.1| flagellar hook-associated protein FlgK [Shewanella sp. ANA-3] Length = 641 Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 10/79 (12%), Positives = 25/79 (31%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 NI LA + +L ++N++N +T G+ S + + Sbjct: 3 IDLLNIARTGVLASQSQLGVTSNNIANANTAGYHRQVATQSTLESQRLGNSFYGTGTYVD 62 Query: 62 GKEYLSKEVGSFISTGTEL 80 + + + + + Sbjct: 63 DVKRIYNDYAARELRIGQT 81 Score = 38.7 bits (88), Expect = 0.81, Method: Composition-based stats. Identities = 4/41 (9%), Positives = 15/41 (36%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E ++ Q + + ++ ++ + ++ Sbjct: 601 SGVNLDEEAANLMRFQQAYQASARIMTTAQQIFDTLLTSVR 641 >gi|325923280|ref|ZP_08184953.1| flagellar hook-associated protein FlgK [Xanthomonas gardneri ATCC 19865] gi|325546207|gb|EGD17388.1| flagellar hook-associated protein FlgK [Xanthomonas gardneri ATCC 19865] Length = 624 Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 27/42 (64%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 + + G +A +A ++ LSTV+ N++N +T G+ +V+F+ Sbjct: 1 MSIMSTGTSALIAFQRALSTVSHNVANINTEGYSRQRVEFAT 42 >gi|90579907|ref|ZP_01235715.1| flagellar basal body rod protein [Vibrio angustum S14] gi|90438792|gb|EAS63975.1| flagellar basal body rod protein [Vibrio angustum S14] Length = 138 Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 24/43 (55%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 GF+ N N M EM MI ++ + + + D +++ +++ ++ Sbjct: 93 GFIYKPNVNVMEEMANMISASRSYQNNVQVADASKQMLMKTLQ 135 >gi|218133658|ref|ZP_03462462.1| hypothetical protein BACPEC_01527 [Bacteroides pectinophilus ATCC 43243] gi|217991033|gb|EEC57039.1| hypothetical protein BACPEC_01527 [Bacteroides pectinophilus ATCC 43243] Length = 149 Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 19/42 (45%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N N + EM +I T+ + + T + + + + Sbjct: 103 GYVTYPNVNVVQEMTDLIDATRSYEANVTAFNAGKSMATKGL 144 Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 8/28 (28%), Positives = 15/28 (53%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTV 32 FNI + A R +++N++N +T Sbjct: 7 FNIASSGMTAQRLRTDVISENIANVNTT 34 >gi|119775444|ref|YP_928184.1| flagellar hook-associated protein [Shewanella amazonensis SB2B] gi|119767944|gb|ABM00515.1| flagellar hook-associated protein [Shewanella amazonensis SB2B] Length = 638 Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 9/51 (17%), Positives = 20/51 (39%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 NI LA + +L ++N++N +T G+ + + + Sbjct: 3 IDLLNIARTGVLASQAQLGVTSNNIANVNTEGYNRQVATQATHLSQRSGNS 53 Score = 35.6 bits (80), Expect = 5.7, Method: Composition-based stats. Identities = 5/38 (13%), Positives = 13/38 (34%) Query: 200 EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 E S N E ++ Q + + ++ ++ Sbjct: 596 EVSGVNLDEEAANLLRFQQSYQASARIMTTAQQIFDTL 633 >gi|39998134|ref|NP_954085.1| flagellar hook-associated protein FlgK [Geobacter sulfurreducens PCA] gi|39985080|gb|AAR36435.1| flagellar hook-associated protein FlgK [Geobacter sulfurreducens PCA] Length = 477 Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 20/52 (38%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 + +I + A L ++N++N +T G+ F+ + + Sbjct: 4 LSLLDIAKSGITAQRLALEVTSENITNVNTPGYSKQTTVFTTATVSQERGFP 55 Score = 39.1 bits (89), Expect = 0.57, Method: Composition-based stats. Identities = 7/38 (18%), Positives = 14/38 (36%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S + E+ +I + F LI+ + M + Sbjct: 436 QSGVSLDEELANLIKYQKAFEGAAKLINTGTEMMDVIL 473 >gi|57242334|ref|ZP_00370273.1| flagellar basal-body rod protein FlgC [Campylobacter upsaliensis RM3195] gi|315638445|ref|ZP_07893622.1| flagellar basal-body rod protein FlgC [Campylobacter upsaliensis JV21] gi|57017014|gb|EAL53796.1| flagellar basal-body rod protein FlgC [Campylobacter upsaliensis RM3195] gi|315481436|gb|EFU72063.1| flagellar basal-body rod protein FlgC [Campylobacter upsaliensis JV21] Length = 164 Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 18/42 (42%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N N + EM +I T+ + + + + AI Sbjct: 118 GYVAFPNVNPVIEMADLIEATRAYQANVSAFTSAKTIAQSAI 159 Score = 39.9 bits (91), Expect = 0.29, Method: Composition-based stats. Identities = 9/39 (23%), Positives = 17/39 (43%), Gaps = 6/39 (15%) Query: 11 AQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43 A R++ ++ N++N T G +R +V F Sbjct: 13 GLSAQRFRMNVISSNIANAQTTRTAEGGPYRRREVIFKA 51 >gi|182418344|ref|ZP_02949639.1| flagellar hook-associated protein FlgK [Clostridium butyricum 5521] gi|237666652|ref|ZP_04526637.1| flagellar hook-associated protein FlgK [Clostridium butyricum E4 str. BoNT E BL5262] gi|182377726|gb|EDT75270.1| flagellar hook-associated protein FlgK [Clostridium butyricum 5521] gi|237657851|gb|EEP55406.1| flagellar hook-associated protein FlgK [Clostridium butyricum E4 str. BoNT E BL5262] Length = 610 Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 18/43 (41%) Query: 199 LEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 L +S + EM +I + + +I+ ++ + I + Sbjct: 566 LSESGVSLDEEMADLIQFQHSYQANAKMINTVDELLDVVINGL 608 Score = 42.5 bits (98), Expect = 0.049, Method: Composition-based stats. Identities = 5/34 (14%), Positives = 15/34 (44%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 + + ++T + N++N+ T G+ + Sbjct: 10 VAKRGLSVQQGNINTTSHNLANSQTAGYSRQRAV 43 >gi|120554031|ref|YP_958382.1| flagellar basal body rod protein FlgC [Marinobacter aquaeolei VT8] gi|120323880|gb|ABM18195.1| flagellar basal-body rod protein FlgC [Marinobacter aquaeolei VT8] Length = 149 Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 19/43 (44%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N + EM M+ ++ F +++ + M + Sbjct: 103 GYVYYPNVNVVEEMADMMSSSRSFQMNVDVMNTAKSMMQRILT 145 Score = 39.5 bits (90), Expect = 0.44, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 34/92 (36%), Gaps = 6/92 (6%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDT------VGFRTIKVKFSEVVGAIKNDIDQKI 56 F+I + A RL+T A N++N +T +R K F+ + A+ N Q Sbjct: 5 NIFDIAGSGMTAQSLRLNTTASNIANAETASSSTDTTYRARKPVFAAIQQAMLNPDQQGF 64 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDA 88 + V + + EL E + Sbjct: 65 GMGSEEGPGAGVRVEGIVESDAELQMRYEPNH 96 >gi|323697455|ref|ZP_08109367.1| protein of unknown function DUF1078 domain protein [Desulfovibrio sp. ND132] gi|323457387|gb|EGB13252.1| protein of unknown function DUF1078 domain protein [Desulfovibrio desulfuricans ND132] Length = 108 Score = 50.3 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 22/44 (50%) Query: 199 LEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 +E SN + EM MI ++ F + TT I +E+ + IA Sbjct: 65 VETSNTDVGREMVDMIVTSRAFEANTTFIRASEEMTGHLLDMIA 108 Score = 45.6 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 29/81 (35%) Query: 9 LAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSK 68 ++A AL A+N++N +T GFR V G ++ A G Sbjct: 6 VSALSALSTVQEVSANNIANMNTDGFRAGAVSLESGPGGQGVEVASITESTAPGAFINGV 65 Query: 69 EVGSFISTGTELDFALEGDAW 89 E + +D + A+ Sbjct: 66 ETSNTDVGREMVDMIVTSRAF 86 >gi|83647175|ref|YP_435610.1| flagellar basal body rod protein FlgC [Hahella chejuensis KCTC 2396] gi|83635218|gb|ABC31185.1| flagellar basal-body rod protein FlgC [Hahella chejuensis KCTC 2396] Length = 145 Score = 50.3 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 20/43 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N + EM M+ ++ F + +++ + M + Sbjct: 100 GYVFYPNVNVVEEMADMMSASRSFQTNVEVLNSAKTMMQRLLT 142 Score = 39.1 bits (89), Expect = 0.59, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 6/49 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEV 44 + F+I + A RL+T A N++N DT +R K F+ V Sbjct: 4 NSIFDIAGSGMTAQSVRLNTTASNLANADTASSSIDQTYRARKPIFAAV 52 >gi|325567534|ref|ZP_08144201.1| flagellar basal-body rod protein FlgB [Enterococcus casseliflavus ATCC 12755] gi|325158967|gb|EGC71113.1| flagellar basal-body rod protein FlgB [Enterococcus casseliflavus ATCC 12755] Length = 158 Score = 50.3 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 10/58 (17%), Positives = 21/58 (36%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLS 67 A QR ++ N++N +T G++ ++ F + AS + Sbjct: 48 TAMNVSAQRAELISSNIANVNTDGYKAKRIVFESELKQALASSGTDAVTEASVSQVKP 105 >gi|163781740|ref|ZP_02176740.1| flagellar biosynthesis FlgC [Hydrogenivirga sp. 128-5-R1-1] gi|159882960|gb|EDP76464.1| flagellar biosynthesis FlgC [Hydrogenivirga sp. 128-5-R1-1] Length = 137 Score = 50.3 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 7/42 (16%), Positives = 16/42 (38%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N + + EM MI + + + + + I Sbjct: 92 GYVRLPNVDLVKEMADMISAVRSYEANLNAFNLTKDMANRTI 133 Score = 42.2 bits (97), Expect = 0.057, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 32/85 (37%), Gaps = 5/85 (5%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDT---VG--FRTIKVKFSEVVGAIKNDIDQKIS 57 +F I + A R++TVA N++N + G FR ++V F + + + Sbjct: 6 RTFEISASGMYAQRLRMNTVASNLANYEAYKQTGEPFRKLEVVFQAIYNPERVKKGEIPV 65 Query: 58 FVASGKEYLSKEVGSFISTGTELDF 82 V +E + + D Sbjct: 66 AVTQIRESDAPFKVIYDPDNPRADA 90 >gi|258592553|emb|CBE68862.1| putative Flagellar hook-associated protein 1 (HAP1) [NC10 bacterium 'Dutch sediment'] Length = 466 Score = 50.3 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 24/62 (38%), Gaps = 3/62 (4%) Query: 1 MQT---SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS 57 M + S + A A + + T N++N +T GF +V + V + + Sbjct: 1 MISLQASLTMARKALQAQQVAIQTTGHNIANANTPGFTRQRVDLTPAVPFSLGSVGSLGT 60 Query: 58 FV 59 V Sbjct: 61 GV 62 Score = 41.4 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 4/42 (9%), Positives = 13/42 (30%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S + EM +I + + + + + + + Sbjct: 424 ASGVSLDEEMTDLIRFQKAYEAAAHFANVVNDLLGTLMSQLG 465 >gi|52082076|ref|YP_080867.1| flagellar hook-associated protein FlgK [Bacillus licheniformis ATCC 14580] gi|52787465|ref|YP_093294.1| flagellar hook-associated protein FlgK [Bacillus licheniformis ATCC 14580] gi|319647943|ref|ZP_08002161.1| FlgK protein [Bacillus sp. BT1B_CT2] gi|52005287|gb|AAU25229.1| flagellar hook-associated protein 1 [Bacillus licheniformis ATCC 14580] gi|52349967|gb|AAU42601.1| FlgK [Bacillus licheniformis ATCC 14580] gi|317390284|gb|EFV71093.1| FlgK protein [Bacillus sp. BT1B_CT2] Length = 507 Score = 50.3 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 18/40 (45%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 I A + LS A+N+SN +T G+ +V F Sbjct: 8 GLEIAKRGLSAQQSALSVTANNISNANTEGYSRQRVTFKA 47 Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 8/41 (19%), Positives = 17/41 (41%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S + EM MI +N+ +I ++ + + I + Sbjct: 463 SAVSLDEEMSNMIQFQHAYNAAARMITLQDEVLDKIINGMG 503 >gi|170289254|ref|YP_001739492.1| flagellar basal-body rod protein FlgB [Thermotoga sp. RQ2] gi|281412856|ref|YP_003346935.1| flagellar basal-body rod protein FlgB [Thermotoga naphthophila RKU-10] gi|170176757|gb|ACB09809.1| flagellar basal-body rod protein FlgB [Thermotoga sp. RQ2] gi|281373959|gb|ADA67521.1| flagellar basal-body rod protein FlgB [Thermotoga naphthophila RKU-10] Length = 127 Score = 50.3 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 21/50 (42%), Gaps = 1/50 (2%) Query: 1 MQTS-FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK 49 M S F A R + + N++N T G++ V F E++ + Sbjct: 1 MFNSNFYTLKQAMDVALLRQNVHSLNIANVSTPGYKRKYVAFEELLKESE 50 >gi|146307863|ref|YP_001188328.1| flagellar hook-associated protein FlgK [Pseudomonas mendocina ymp] gi|145576064|gb|ABP85596.1| flagellar hook-associated protein FlgK [Pseudomonas mendocina ymp] Length = 681 Score = 50.3 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 19/52 (36%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M NIGL+ A + L+ N+ N +T GF + + Sbjct: 1 MADLLNIGLSGLSASKTSLAVTGHNIVNVNTPGFSRQEAVQTTRTPQFSGAG 52 >gi|160880851|ref|YP_001559819.1| flagellar basal-body rod protein FlgC [Clostridium phytofermentans ISDg] gi|160429517|gb|ABX43080.1| flagellar basal-body rod protein FlgC [Clostridium phytofermentans ISDg] Length = 150 Score = 50.3 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 9/44 (20%), Positives = 23/44 (52%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 + G++ N N++ EM +I T+ + + T + + +L+ + Sbjct: 103 QDGYVTMPNVNTVTEMTNLISATRSYEANVTAFNATKNMLLKGL 146 Score = 49.1 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 6/47 (12%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43 NI + A R+ ++ N++N +T G +R V FSE Sbjct: 5 NGMNISASGMSAQRLRMDIISQNIANVETTRDENGNPYRRKTVVFSE 51 >gi|303240172|ref|ZP_07326692.1| flagellar hook-associated protein FlgK [Acetivibrio cellulolyticus CD2] gi|302592263|gb|EFL61991.1| flagellar hook-associated protein FlgK [Acetivibrio cellulolyticus CD2] Length = 689 Score = 50.3 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 20/47 (42%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50 SF I + E+ LS N++N +T G+ + S +N Sbjct: 7 SFEIARSGMTVNERALSVTGHNIANVNTAGYVRQQAIISSGPMQNEN 53 Score = 39.9 bits (91), Expect = 0.30, Method: Composition-based stats. Identities = 5/39 (12%), Positives = 15/39 (38%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 + EM M+ +++ + I ++ + I + Sbjct: 647 VSMDEEMSNMMKYKFAYSASSRAISIVDEMLDTIISRMG 685 >gi|319427083|gb|ADV55157.1| flagellar hook-associated protein FlgK [Shewanella putrefaciens 200] Length = 641 Score = 50.3 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 27/80 (33%), Gaps = 1/80 (1%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA-IKNDIDQKISFVA 60 NI LA + +L ++N++N +T G+ S + N ++V Sbjct: 3 IDLLNIARTGVLASQSQLGVTSNNIANANTAGYHRQVATQSTLESQRFGNSFYGTGTYVD 62 Query: 61 SGKEYLSKEVGSFISTGTEL 80 K + + G Sbjct: 63 DVKRIYNDYAARELRIGQTT 82 Score = 38.3 bits (87), Expect = 0.82, Method: Composition-based stats. Identities = 4/41 (9%), Positives = 15/41 (36%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E ++ Q + + ++ ++ + ++ Sbjct: 601 SGVNLDEEAANLMRFQQAYQASARIMTTAQQIFDTLLTSVR 641 >gi|89075493|ref|ZP_01161904.1| Putative flagellar basal body rod protein FlgC [Photobacterium sp. SKA34] gi|89048765|gb|EAR54336.1| Putative flagellar basal body rod protein FlgC [Photobacterium sp. SKA34] Length = 138 Score = 50.3 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 24/43 (55%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 GF+ N N M EM MI ++ + + + D +++ +++ ++ Sbjct: 93 GFIYKPNVNVMEEMANMISASRSYQNNVQVADASKQMLMKTLQ 135 >gi|224373713|ref|YP_002608085.1| flagellar basal body rod protein FlgC [Nautilia profundicola AmH] gi|223589296|gb|ACM93032.1| flagellar basal-body rod protein FlgC [Nautilia profundicola AmH] Length = 165 Score = 50.3 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 9/47 (19%), Positives = 19/47 (40%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G++ N N + EM ++ T+ + + + AI + S Sbjct: 119 GYVAYPNINPVIEMADLLEATRAYQANVAAFQSAKTMANSAINILQS 165 Score = 41.8 bits (96), Expect = 0.088, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 6/48 (12%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44 SF+I A R++ +++N++N +T G +R +V F V Sbjct: 5 NSFDISGYGLSAQRFRINIISENIANANTTRTDEGGPYRRKEVIFKAV 52 >gi|78047580|ref|YP_363755.1| flagellar hook-associated protein FlgK [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325927969|ref|ZP_08189190.1| flagellar hook-associated protein FlgK [Xanthomonas perforans 91-118] gi|78036010|emb|CAJ23701.1| flagellar hook-associated protein 1 (HAP1) [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325541654|gb|EGD13175.1| flagellar hook-associated protein FlgK [Xanthomonas perforans 91-118] Length = 624 Score = 50.3 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 27/42 (64%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 + + G +A +A ++ LSTV+ N++N +T G+ +V+F+ Sbjct: 1 MSIMSTGTSALIAFQRALSTVSHNVANINTEGYSRQRVEFAT 42 >gi|146293684|ref|YP_001184108.1| flagellar hook-associated protein FlgK [Shewanella putrefaciens CN-32] gi|145565374|gb|ABP76309.1| flagellar hook-associated protein FlgK [Shewanella putrefaciens CN-32] Length = 641 Score = 50.3 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 27/80 (33%), Gaps = 1/80 (1%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA-IKNDIDQKISFVA 60 NI LA + +L ++N++N +T G+ S + N ++V Sbjct: 3 IDLLNIARTGVLASQSQLGVTSNNIANANTAGYHRQVATQSTLESQRFGNSFYGTGTYVD 62 Query: 61 SGKEYLSKEVGSFISTGTEL 80 K + + G Sbjct: 63 DVKRIYNDYAARELRIGQTT 82 Score = 38.3 bits (87), Expect = 0.84, Method: Composition-based stats. Identities = 4/41 (9%), Positives = 15/41 (36%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E ++ Q + + ++ ++ + ++ Sbjct: 601 SGVNLDEEAANLMRFQQAYQASARIMTTAQQIFDTLLTSVR 641 >gi|254502506|ref|ZP_05114657.1| flagellar basal-body rod protein FlgC [Labrenzia alexandrii DFL-11] gi|222438577|gb|EEE45256.1| flagellar basal-body rod protein FlgC [Labrenzia alexandrii DFL-11] Length = 136 Score = 49.9 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 16/116 (13%), Positives = 35/116 (30%), Gaps = 11/116 (9%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSE----VVGAIKN 50 S I + A R+ +A+N++N ++ +R F +GA K Sbjct: 4 MKSLFISASGLKAQNGRMRVIAENIANANSTARTPDEEPYRRKIPTFQSEFDKQLGADKV 63 Query: 51 DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106 ++ + + ++ K + G L + A + Sbjct: 64 ELGRIVEDKSAFKSTHMPGHPAADENGYVLQPNVSTLVESADMREAQRSYEANLNV 119 Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 7/47 (14%), Positives = 20/47 (42%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G++ N +++ E M + + + +I+ K + I + + Sbjct: 90 GYVLQPNVSTLVESADMREAQRSYEANLNVIETTRKMLQRTIDILRA 136 >gi|253702510|ref|YP_003023699.1| flagellar basal-body rod protein FlgC [Geobacter sp. M21] gi|251777360|gb|ACT19941.1| flagellar basal-body rod protein FlgC [Geobacter sp. M21] Length = 145 Score = 49.9 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 20/42 (47%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N N + EM MI ++ + + T ++ L+ + Sbjct: 100 GYVAYPNINVVEEMADMITASRSYEANITATQASKSMALKTL 141 Score = 40.6 bits (93), Expect = 0.20, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 29/82 (35%), Gaps = 8/82 (9%) Query: 1 MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDI 52 M TS +I A A R++ ++ N++N ++ G +R F+ Sbjct: 1 MDFFTSMDISATALAAERTRMNLISSNLANVNSTRTAEGGPYRRKDAVFTATPLKEGASF 60 Query: 53 DQKISFVASGKEYLSKEVGSFI 74 +S A + ++ Sbjct: 61 GAALSKAAGARSVQVTQINEDQ 82 >gi|59712483|ref|YP_205259.1| flagellar basal body rod protein FlgC [Vibrio fischeri ES114] gi|197336337|ref|YP_002156702.1| flagellar basal-body rod protein FlgC [Vibrio fischeri MJ11] gi|24459275|gb|AAL86628.1| FlgC [Vibrio fischeri ES114] gi|59480584|gb|AAW86371.1| flagellar proximal rod protein FlgC [Vibrio fischeri ES114] gi|197317827|gb|ACH67274.1| flagellar basal-body rod protein FlgC [Vibrio fischeri MJ11] Length = 138 Score = 49.9 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 22/43 (51%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N M EM MI ++ + + + D +++ + +R Sbjct: 93 GYIFKPNVNVMEEMANMISASRSYQTNVQVADASKQMLQSTLR 135 >gi|311694359|gb|ADP97232.1| flagellar basal-body rod protein FlgC-like protein [marine bacterium HP15] Length = 149 Score = 49.9 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 19/43 (44%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N + EM M+ ++ F +++ + M + Sbjct: 103 GYVFYPNVNVVEEMADMMSSSRSFQMNVDVMNTAKSMMQRILT 145 Score = 41.4 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 21/92 (22%), Positives = 35/92 (38%), Gaps = 6/92 (6%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDT----VG--FRTIKVKFSEVVGAIKNDIDQKI 56 + F+I + A RL+T A N++N +T G +R K FS + ++ N + Sbjct: 5 SIFDIAGSGMTAQSLRLNTTASNIANAETASSSTGETYRARKPVFSAIQQSLMNPGQGGL 64 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDA 88 A V + + EL E Sbjct: 65 PMAADEGPGAGVRVDGIVESDAELQMRYEPHH 96 >gi|225851146|ref|YP_002731380.1| flagellar hook-associated protein FlgK [Persephonella marina EX-H1] gi|225645441|gb|ACO03627.1| flagellar hook-associated protein FlgK [Persephonella marina EX-H1] Length = 485 Score = 49.9 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 8/46 (17%), Positives = 20/46 (43%) Query: 193 TVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 TV E S+ N E+ + L + + + +I+ ++ + + Sbjct: 436 TVDSKMKEISSVNLDEELINLTKLQRAYEASAKIINVTDELLQTLL 481 >gi|126738582|ref|ZP_01754287.1| flagellar basal-body rod protein FlgC [Roseobacter sp. SK209-2-6] gi|126720381|gb|EBA17087.1| flagellar basal-body rod protein FlgC [Roseobacter sp. SK209-2-6] Length = 130 Score = 49.9 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 37/91 (40%), Gaps = 10/91 (10%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS- 61 S N+ + A +RL V++N+SN DT G+R V F V ++ND ++ + + Sbjct: 6 NSLNVTASGLKAQAKRLRHVSENISNADTPGYRRKTVPFLA-VRELQNDAEKVETGRVTL 64 Query: 62 --------GKEYLSKEVGSFISTGTELDFAL 84 + G+ +D + Sbjct: 65 DRTELTNIYDPTHPMADDTGHYEGSNVDLMI 95 Score = 40.2 bits (92), Expect = 0.24, Method: Composition-based stats. Identities = 6/37 (16%), Positives = 15/37 (40%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 G E SN + M E+ + +++ + ++ Sbjct: 84 GHYEGSNVDLMIEIADAREAQRSYDANLKMFEQTRSM 120 >gi|312126816|ref|YP_003991690.1| flagellar basal-body rod protein flgb [Caldicellulosiruptor hydrothermalis 108] gi|311776835|gb|ADQ06321.1| flagellar basal-body rod protein FlgB [Caldicellulosiruptor hydrothermalis 108] Length = 132 Score = 49.9 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 9/57 (15%), Positives = 22/57 (38%) Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSF 73 +R +++N++N DT G++ + F + N + F + + Sbjct: 20 KRNEIISNNIANADTPGYKAKDLNFEAYLQRSLNQEEGLQLFTTNERHIKESSSPDN 76 >gi|319790356|ref|YP_004151989.1| flagellar hook-associated protein FlgK [Thermovibrio ammonificans HB-1] gi|317114858|gb|ADU97348.1| flagellar hook-associated protein FlgK [Thermovibrio ammonificans HB-1] Length = 449 Score = 49.9 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 5/46 (10%), Positives = 19/46 (41%) Query: 194 VKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +K+ E S N+ E+ + + + + ++ ++ + + Sbjct: 401 IKQKVEELSGVNTDEELVNLTRYQRAYQAAARVVTVTDELLQTILN 446 Score = 39.9 bits (91), Expect = 0.34, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 24/47 (51%), Gaps = 4/47 (8%) Query: 4 SFNIGLA----AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46 + L+ A L+ + ++T N+SN +T G+ + F+++ G Sbjct: 2 ALFGALSLASQALLSQQIAVNTTNRNLSNVNTDGYSREEPVFADIPG 48 >gi|24217008|ref|NP_714489.1| flagellar hook-associated protein FlgK [Leptospira interrogans serovar Lai str. 56601] gi|24198413|gb|AAN51507.1| flagellar hook-associated protein FlgK [Leptospira interrogans serovar Lai str. 56601] Length = 636 Score = 49.9 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 7/39 (17%), Positives = 15/39 (38%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 N EM M+ +N+ +I+ + + I + Sbjct: 597 VNLDEEMANMVQFQHAYNASAKMINTMNEILDTIINRLG 635 Score = 36.0 bits (81), Expect = 4.5, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 31/99 (31%), Gaps = 9/99 (9%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV---------VGAIKNDID 53 + IG A +Q L T N+SN D + +V + + + I Sbjct: 6 SGLEIGKRGLTAHQQALQTTGHNISNADNKHYARQRVTMTAMDPLYDPSLNRANLPGQIG 65 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL 92 Q + + + + I T D+ + + Sbjct: 66 QGVEIASIERIRDNFIDDRIIETSGNKDYWAARNEYLYQ 104 >gi|327398477|ref|YP_004339346.1| flagellar hook-associated protein FlgK [Hippea maritima DSM 10411] gi|327181106|gb|AEA33287.1| flagellar hook-associated protein FlgK [Hippea maritima DSM 10411] Length = 580 Score = 49.9 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 23/210 (10%), Positives = 52/210 (24%), Gaps = 13/210 (6%) Query: 44 VVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103 V N+ D + S + L + + + ++ + G T D Sbjct: 373 VFTIPVNEDDHLQAQDPSDEHSLIERFNNIMQGYAQMSISPAGKVQIKAIGNYKFAFTYD 432 Query: 104 GRFKVTDDG-SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162 + G + +D+ + P K G+ S + Sbjct: 433 SSNLLAATGINTFFTGHNSSDIDVNRIVQNDPSKIAAGKTLNPGDSSNAQTIAQVQLNKV 492 Query: 163 VDMSQGFVRRENSGISPNIPPTPLEDLSGVTVK----------RGFLEDSNANSMYEMGQ 212 + + + + +I T K + LE + E Sbjct: 493 MVNNTQTIDEYYNAFLGSIGSTKQRFDEIYKAKEAVYQQLKTTQQSLEG--VSLDEEAAN 550 Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 +I + + + I + I + Sbjct: 551 LIKFQRAYQANAKFISVVDDMTQTLINMVR 580 Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 9/37 (24%), Positives = 21/37 (56%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 + NIG++ + ++T +N++N +T G+ +V Sbjct: 7 ALNIGVSGIFVNKAAINTTGNNVANVNTPGYSRERVD 43 >gi|221635454|ref|YP_002523330.1| flagellar hook-associated protein FlgK [Thermomicrobium roseum DSM 5159] gi|221158038|gb|ACM07156.1| flagellar hook-associated protein FlgK [Thermomicrobium roseum DSM 5159] Length = 468 Score = 49.9 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 8/38 (21%), Positives = 17/38 (44%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 + +A ++ + T N++N +T GF +V Sbjct: 4 RALETAFRGLMAQQRVVDTANHNIANANTPGFARQRVS 41 Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 6/39 (15%), Positives = 14/39 (35%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 + EM +I Q + + I ++ + I + Sbjct: 426 VSLDEEMANLIKYQQAYGAAARAITAVDEMLDRIINGMG 464 >gi|167038179|ref|YP_001665757.1| flagellar hook-associated protein FlgK [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|167039112|ref|YP_001662097.1| flagellar hook-associated protein FlgK [Thermoanaerobacter sp. X514] gi|300913298|ref|ZP_07130615.1| flagellar hook-associated protein FlgK [Thermoanaerobacter sp. X561] gi|307723688|ref|YP_003903439.1| flagellar hook-associated protein FlgK [Thermoanaerobacter sp. X513] gi|320116588|ref|YP_004186747.1| flagellar hook-associated protein FlgK [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166853352|gb|ABY91761.1| flagellar hook-associated protein FlgK [Thermoanaerobacter sp. X514] gi|166857013|gb|ABY95421.1| flagellar hook-associated protein FlgK [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|300889983|gb|EFK85128.1| flagellar hook-associated protein FlgK [Thermoanaerobacter sp. X561] gi|307580749|gb|ADN54148.1| flagellar hook-associated protein FlgK [Thermoanaerobacter sp. X513] gi|319929679|gb|ADV80364.1| flagellar hook-associated protein FlgK [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 480 Score = 49.9 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 7/54 (12%), Positives = 17/54 (31%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56 I ++ L N++N +T G+ V + + + + Sbjct: 5 QGLEIAKTGLFVSQKALDVTGHNIANANTPGYTRQVVDMASIAPPTTFGMYDQW 58 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 6/41 (14%), Positives = 16/41 (39%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S + EM M+ + + + +I ++ + I + Sbjct: 436 SGVSLDEEMTNMLKYQKSYAASARVITAIDELLDTLINRMG 476 >gi|307823529|ref|ZP_07653758.1| flagellar basal-body rod protein FlgC [Methylobacter tundripaludum SV96] gi|307735514|gb|EFO06362.1| flagellar basal-body rod protein FlgC [Methylobacter tundripaludum SV96] Length = 138 Score = 49.9 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 17/119 (14%), Positives = 49/119 (41%), Gaps = 6/119 (5%) Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 ++++ +++ + ++ KVI S G V +++ + Sbjct: 22 NLVASNISNANSVSSSAADVYKSRQPVFAAELDKVINKQNATSKVNVLGVVEGQDAPVME 81 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 P P+ + G++ SN N++ EM M+ ++ + + +++ ++ ML+ + Sbjct: 82 YAPNHPMANSD------GYIFKSNVNTVEEMANMMSASRSYQNNVDVLNTAKQMMLQTL 134 >gi|301168115|emb|CBW27701.1| flagellar basal-body rod protein [Bacteriovorax marinus SJ] Length = 146 Score = 49.9 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 22/43 (51%) Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 +G++ + N M EM MI ++ + + ++ + ++A+ Sbjct: 99 QGYVAYPDINVMEEMANMISASRAYEANINAMNTTKNMAMKAL 141 Score = 39.5 bits (90), Expect = 0.48, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 8/51 (15%) Query: 1 MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43 M TS I + A ++R+++++ N++N T G +R +V F Sbjct: 1 MDLLTSLKISSSGLAANKKRMASISSNIANAQTTRTAEGGPYRRKEVVFGS 51 >gi|288573035|ref|ZP_06391392.1| flagellar basal-body rod protein FlgC [Dethiosulfovibrio peptidovorans DSM 11002] gi|288568776|gb|EFC90333.1| flagellar basal-body rod protein FlgC [Dethiosulfovibrio peptidovorans DSM 11002] Length = 140 Score = 49.9 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 6/55 (10%), Positives = 19/55 (34%) Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 P + + G++ N + + EM M+ ++ + + + + Sbjct: 76 TTAPRLVYQPDHPDADQEGYVAMPNVSVVREMADMMVASRAYEANLAVTTSAKSM 130 Score = 43.3 bits (100), Expect = 0.033, Method: Composition-based stats. Identities = 13/109 (11%), Positives = 32/109 (29%), Gaps = 12/109 (11%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTD---TV-G--FRTIKVKFSEVVGAIKNDIDQKI 56 S ++ ++ A + T++ N++N + T G + F +++ I D K Sbjct: 5 KSIDVAASSLTAHRLWMDTISQNLANVNSSRTPEGGPYVRRVPVFQQILDEIGEDGKVKG 64 Query: 57 SFVA------SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 + E A+ + + + Sbjct: 65 GVKVVEIAKDTTTAPRLVYQPDHPDADQEGYVAMPNVSVVREMADMMVA 113 >gi|148980296|ref|ZP_01815983.1| putative flagellar hook-associated protein [Vibrionales bacterium SWAT-3] gi|145961315|gb|EDK26625.1| putative flagellar hook-associated protein [Vibrionales bacterium SWAT-3] Length = 459 Score = 49.9 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 33/95 (34%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65 NIGL+ LA L+T A N +N +T G+ V + + + V Sbjct: 5 NIGLSGALANRVALNTTAQNTANVNTPGYSRQIVTMEASLSGNAVNGINLGAGVEVSDIL 64 Query: 66 LSKEVGSFISTGTELDFALEGDAWFALESPRGIIL 100 + S + A ++F S +L Sbjct: 65 RIADQSSINRLREATESAQYSQSYFNGLSNLENLL 99 Score = 37.2 bits (84), Expect = 2.2, Method: Composition-based stats. Identities = 7/38 (18%), Positives = 13/38 (34%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S NS E M+ + + +I + +R Sbjct: 420 SAVNSDEEAANMLLYLNAYEANMKIISTANQMFQTLLR 457 >gi|294665573|ref|ZP_06730854.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292604671|gb|EFF48041.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 624 Score = 49.9 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 27/42 (64%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 + + G +A +A ++ LSTV+ N++N +T G+ +V+F+ Sbjct: 1 MSIMSTGTSALIAFQRALSTVSHNVANINTEGYSRQRVEFAT 42 >gi|268589172|gb|ACZ06862.1| flagella hook-associated protein [Xanthomonas axonopodis pv. glycines] Length = 624 Score = 49.9 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 27/42 (64%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 + + G +A +A ++ LSTV+ N++N +T G+ +V+F+ Sbjct: 1 MSIMSTGTSALIAFQRALSTVSHNVANINTEGYSRQRVEFAT 42 >gi|294624307|ref|ZP_06703010.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292601389|gb|EFF45423.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 624 Score = 49.9 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 27/42 (64%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 + + G +A +A ++ LSTV+ N++N +T G+ +V+F+ Sbjct: 1 MSIMSTGTSALIAFQRALSTVSHNVANINTEGYSRQRVEFAT 42 >gi|21242721|ref|NP_642303.1| flagellar hook-associated protein FlgK [Xanthomonas axonopodis pv. citri str. 306] gi|21108196|gb|AAM36839.1| flagellar protein [Xanthomonas axonopodis pv. citri str. 306] Length = 624 Score = 49.9 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 27/42 (64%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 + + G +A +A ++ LSTV+ N++N +T G+ +V+F+ Sbjct: 1 MSIMSTGTSALIAFQRALSTVSHNVANINTEGYSRQRVEFAT 42 >gi|154250381|ref|YP_001411206.1| flagellar basal-body rod protein FlgB [Fervidobacterium nodosum Rt17-B1] gi|154154317|gb|ABS61549.1| flagellar basal-body rod protein FlgB [Fervidobacterium nodosum Rt17-B1] Length = 131 Score = 49.9 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 20/54 (37%), Gaps = 5/54 (9%) Query: 1 MQTSFNIG-----LAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK 49 M S A +R A N++N +T G++ + F E + K Sbjct: 1 MDNSIFNSNFDTLKTALDVQMKRQEIHAQNIANAETPGYKRKYIAFEEYLQESK 54 >gi|304317611|ref|YP_003852756.1| flagellar hook-associated protein FlgK [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302779113|gb|ADL69672.1| flagellar hook-associated protein FlgK [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 478 Score = 49.9 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 6/41 (14%), Positives = 16/41 (39%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S + EM M+ + + + +I ++ + I + Sbjct: 436 SGVSLDEEMTNMLKYQKSYEASARMITVMDELLDTLINKMG 476 Score = 44.1 bits (102), Expect = 0.015, Method: Composition-based stats. Identities = 10/54 (18%), Positives = 19/54 (35%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56 I A +Q L+ N+SN +T G+ + S + + + Sbjct: 5 QGLEIAKTGLFASQQALNLTGHNISNANTPGYTRQVIDLSAIAPPTTYGMADQW 58 >gi|255597140|ref|XP_002536705.1| Flagellar hook-associated protein, putative [Ricinus communis] gi|223518821|gb|EEF25678.1| Flagellar hook-associated protein, putative [Ricinus communis] Length = 439 Score = 49.9 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 14/74 (18%), Positives = 28/74 (37%), Gaps = 4/74 (5%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65 L+ LA + L+TV+ N++N T G+ V ++ A +D + Sbjct: 5 YNALSGALAAQAALNTVSQNLANVQTPGYTRQGV----LLQATASDPGTLSAGNGVKIGS 60 Query: 66 LSKEVGSFISTGTE 79 L + ++ Sbjct: 61 LLRFSNTYQLQQMW 74 >gi|157959904|ref|YP_001499938.1| flagellar basal-body rod protein FlgC [Shewanella pealeana ATCC 700345] gi|157844904|gb|ABV85403.1| flagellar basal-body rod protein FlgC [Shewanella pealeana ATCC 700345] Length = 139 Score = 49.9 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 10/48 (20%), Positives = 27/48 (56%), Gaps = 1/48 (2%) Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 +G++ SN N++ EM M+ ++ F + +++ +SM + + + + Sbjct: 92 QGYVAYSNVNTVEEMADMMAASRSFETSVEVMNRA-RSMQQGLLQLGT 138 Score = 36.0 bits (81), Expect = 4.1, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 6/51 (11%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKND 51 I A A RL+TVA N++N FR +K FS + + Sbjct: 9 IAGAGMNAQTIRLNTVASNLANAGAAAESPDQAFRALKPVFSTIYKQTQEG 59 >gi|327480026|gb|AEA83336.1| flagellar hook-associated protein FlgK [Pseudomonas stutzeri DSM 4166] Length = 685 Score = 49.9 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 11/52 (21%), Positives = 20/52 (38%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M +IGL+ A + +LS N++N +T G+ + Sbjct: 1 MADLLSIGLSGLAASKTQLSITGHNITNVNTPGYSRQDATQATRSPQFSGAG 52 >gi|256750927|ref|ZP_05491811.1| flagellar hook-associated protein FlgK [Thermoanaerobacter ethanolicus CCSD1] gi|256750262|gb|EEU63282.1| flagellar hook-associated protein FlgK [Thermoanaerobacter ethanolicus CCSD1] Length = 480 Score = 49.9 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 7/54 (12%), Positives = 17/54 (31%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56 I ++ L N++N +T G+ V + + + + Sbjct: 5 QGLEIAKTGLFVSQKALDVTGHNIANANTPGYTRQVVDMASIAPPTTFGMYDQW 58 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 6/41 (14%), Positives = 16/41 (39%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S + EM M+ + + + +I ++ + I + Sbjct: 436 SGVSLDEEMTNMLKYQKSYAASARVITAIDELLDTLINRMG 476 >gi|313905141|ref|ZP_07838510.1| flagellar basal-body rod protein FlgC [Eubacterium cellulosolvens 6] gi|313470044|gb|EFR65377.1| flagellar basal-body rod protein FlgC [Eubacterium cellulosolvens 6] Length = 151 Score = 49.9 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 7/41 (17%), Positives = 18/41 (43%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 G++E N + E + T+ + + T ++ + +A Sbjct: 106 GYVEMPNVDVTKETVDAMSATRSYEANVTALNAIKMMTQKA 146 Score = 42.9 bits (99), Expect = 0.034, Method: Composition-based stats. Identities = 11/29 (37%), Positives = 16/29 (55%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTV 32 SF+I + A RL A+N++N DT Sbjct: 6 SFDISASGMSAQRIRLDIAAENIANVDTT 34 >gi|117923582|ref|YP_864199.1| flagellar basal-body rod protein FlgB [Magnetococcus sp. MC-1] gi|117607338|gb|ABK42793.1| flagellar basal-body rod protein FlgB [Magnetococcus sp. MC-1] Length = 137 Score = 49.9 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 9/49 (18%), Positives = 21/49 (42%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 ++R +A N++N DT G++ ++ F E + + + Sbjct: 22 QRRQDIIAANIANADTPGYKARRLSFEEELAKSTPRDGDLPMARSDPRH 70 >gi|119477955|ref|ZP_01618055.1| flagellar basal-body rod protein FlgC [marine gamma proteobacterium HTCC2143] gi|119448868|gb|EAW30110.1| flagellar basal-body rod protein FlgC [marine gamma proteobacterium HTCC2143] Length = 147 Score = 49.9 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N + EM MI ++ F L++ ++ M +R Sbjct: 102 GYVYYPNVNVVEEMADMISASRSFQVNVELMNSAKQMMQGLLR 144 >gi|296274007|ref|YP_003656638.1| flagellar basal-body rod protein FlgC [Arcobacter nitrofigilis DSM 7299] gi|296098181|gb|ADG94131.1| flagellar basal-body rod protein FlgC [Arcobacter nitrofigilis DSM 7299] Length = 153 Score = 49.9 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 23/48 (47%), Gaps = 6/48 (12%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVV 45 +NI + A R++ V+ N++N T G ++ V F E++ Sbjct: 6 GYNIASSGMSAQRTRINVVSANIANAKTTHSTDGGPYKKQNVVFQEML 53 Score = 44.5 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 7/47 (14%), Positives = 19/47 (40%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G++ N N + EM +I + + + + + + + + S Sbjct: 107 GYVAYPNINPVIEMVDLIEAMRSYEANVSAFTTTKTIDTKTLELLRS 153 >gi|209695764|ref|YP_002263694.1| flagellar basal body rod protein FlgC [Aliivibrio salmonicida LFI1238] gi|208009717|emb|CAQ80021.1| flagellar basal-body rod protein FlgC [Aliivibrio salmonicida LFI1238] Length = 138 Score = 49.9 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N M EM MI ++ + + + D ++ + +R Sbjct: 93 GYIFKPNVNVMEEMANMISASRSYQTNVQVADAGKQMLQSTLR 135 >gi|163744319|ref|ZP_02151679.1| flagellar basal body rod protein [Oceanibulbus indolifex HEL-45] gi|161381137|gb|EDQ05546.1| flagellar basal body rod protein [Oceanibulbus indolifex HEL-45] Length = 136 Score = 49.9 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 16/110 (14%), Positives = 38/110 (34%), Gaps = 7/110 (6%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQKISFV 59 I + A RL +++N++N D+ G FR + FSE++ ++ + Sbjct: 10 IAASGMTAQTARLRVISENVANADSTGTTPGADPFRRKTISFSELIDRNGGGSLVEVDRI 69 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109 + ++ E + + +E +R+ + Sbjct: 70 GRDQSPFRRDYDPAHPAADETGYVNRPNVDPIIEMANMREASRNYEANMN 119 Score = 44.1 bits (102), Expect = 0.016, Method: Composition-based stats. Identities = 12/119 (10%), Positives = 33/119 (27%) Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 I + G + K I+ L + V + G Sbjct: 14 GMTAQTARLRVISENVANADSTGTTPGADPFRRKTISFSELIDRNGGGSLVEVDRIGRDQ 73 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 + + + G++ N + + EM M ++ + + + + + + + Sbjct: 74 SPFRRDYDPAHPAADETGYVNRPNVDPIIEMANMREASRNYEANMNMFESGRRMRSQML 132 >gi|323163759|gb|EFZ49578.1| flagellar basal-body rod protein flgF domain protein [Escherichia coli E128010] Length = 77 Score = 49.9 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 16/44 (36%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44 M + + A + + A N++N T GFR V Sbjct: 1 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV 44 >gi|237752647|ref|ZP_04583127.1| biosynthetic arginine decarboxylase [Helicobacter winghamensis ATCC BAA-430] gi|229376136|gb|EEO26227.1| biosynthetic arginine decarboxylase [Helicobacter winghamensis ATCC BAA-430] Length = 71 Score = 49.9 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 18/52 (34%) Query: 187 EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 + V++ LE SN + ++ Q I + I + + + Sbjct: 16 QSGISTNVQQATLETSNVDLTTQIPQQIVAQNGVEANVKSIQTADSMLQTLL 67 >gi|168698713|ref|ZP_02730990.1| flagellar basal-body rod protein FlgB [Gemmata obscuriglobus UQM 2246] Length = 116 Score = 49.9 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 18/116 (15%), Positives = 34/116 (29%), Gaps = 7/116 (6%) Query: 5 FNIGLAAQLALEQRLS-------TVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS 57 N L L Q L +A N++N +T G++ ++V F + Sbjct: 1 MNTNLPGLSVLTQLLDASGLRHRVIAQNVANVNTPGYKRLEVAFEADLAKALASPTGGTP 60 Query: 58 FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113 E + + + ++ II +R G + G Sbjct: 61 VKPRVVTGDGPERVDGNNVDIDAEMNALAKNALLYQAATQIIASRVGTLRSAISGR 116 >gi|166712056|ref|ZP_02243263.1| flagellar hook-associated protein FlgK [Xanthomonas oryzae pv. oryzicola BLS256] Length = 624 Score = 49.9 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 27/42 (64%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 + + G +A +A ++ LSTV+ N++N +T G+ +V+F+ Sbjct: 1 MSIMSTGTSALIAFQRALSTVSHNVANINTEGYSRQRVEFAT 42 >gi|121535557|ref|ZP_01667365.1| flagellar hook-associated protein FlgK [Thermosinus carboxydivorans Nor1] gi|121305885|gb|EAX46819.1| flagellar hook-associated protein FlgK [Thermosinus carboxydivorans Nor1] Length = 494 Score = 49.9 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 8/36 (22%), Positives = 16/36 (44%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 N EM MI Q +N+ ++ ++ + + I Sbjct: 452 VNMDEEMTNMIRYQQGYNAAARVVTAIDEMLDKLIN 487 Score = 41.4 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 4/43 (9%) Query: 2 QTSFNIGLAAQL----ALEQRLSTVADNMSNTDTVGFRTIKVK 40 S GL A A + L TV N+SN +T G+ Sbjct: 1 MRSTFSGLNALTRGIYANQIALDTVGHNISNANTEGYSRQLAS 43 >gi|45659268|ref|YP_003354.1| flagellar hook-associated protein FlgK [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45602514|gb|AAS71991.1| flagellar hook-associated protein 1 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 636 Score = 49.9 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 7/39 (17%), Positives = 15/39 (38%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 N EM M+ +N+ +I+ + + I + Sbjct: 597 VNLDEEMANMVQFQHAYNASAKMINTMNEILDTIINRLG 635 Score = 36.0 bits (81), Expect = 5.2, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 31/99 (31%), Gaps = 9/99 (9%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV---------VGAIKNDID 53 + IG A +Q L T N+SN D + +V + + + I Sbjct: 6 SGLEIGKRGLTAHQQALQTTGHNISNADNKHYARQRVTMTAMDPLYDPSLNRANLPGQIG 65 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL 92 Q + + + + I T D+ + + Sbjct: 66 QGVEIASIERIRDNFIDDRIIETSGNKDYWAARNEYLYQ 104 >gi|294635619|ref|ZP_06714095.1| flagellar hook-associated protein FlgK [Edwardsiella tarda ATCC 23685] gi|291091002|gb|EFE23563.1| flagellar hook-associated protein FlgK [Edwardsiella tarda ATCC 23685] Length = 552 Score = 49.9 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 21/43 (48%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 M N ++ A + L+ ++N+++ T G+ V F+E Sbjct: 1 MANLINNAMSGLNAAQTALAVTSNNINHVYTAGYNRQSVSFAE 43 >gi|221639489|ref|YP_002525751.1| Flagellar hook-associated protein 1 [Rhodobacter sphaeroides KD131] gi|221160270|gb|ACM01250.1| Flagellar hook-associated protein 1 [Rhodobacter sphaeroides KD131] Length = 1363 Score = 49.9 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 30/79 (37%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + +I + L+ LS A+N++N +T G+ + ++V G + S Sbjct: 1 MSILDIARSGLLSYRSALSVTAENIANVNTEGYVRREAVLAQVPGGQISPTSAATSGQGV 60 Query: 62 GKEYLSKEVGSFISTGTEL 80 E + + ++ Sbjct: 61 RVEDVRRAFDGLVAQRLRT 79 >gi|77463646|ref|YP_353150.1| FlgK flagellar hook-associated protein 1 [Rhodobacter sphaeroides 2.4.1] gi|77388064|gb|ABA79249.1| FlgK flagellar hook-associated protein 1 [Rhodobacter sphaeroides 2.4.1] Length = 1363 Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 30/79 (37%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + +I + L+ LS A+N++N +T G+ + ++V G + S Sbjct: 1 MSILDIARSGLLSYRSALSVTAENIANVNTEGYVRREAVLAQVPGGQISPTSAATSGQGV 60 Query: 62 GKEYLSKEVGSFISTGTEL 80 E + + ++ Sbjct: 61 RVEDVRRAFDGLVAQRLRT 79 >gi|167750732|ref|ZP_02422859.1| hypothetical protein EUBSIR_01710 [Eubacterium siraeum DSM 15702] gi|167656411|gb|EDS00541.1| hypothetical protein EUBSIR_01710 [Eubacterium siraeum DSM 15702] gi|291532066|emb|CBK97651.1| flagellar basal-body rod protein FlgC [Eubacterium siraeum 70/3] Length = 160 Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 6/48 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43 +S NI + A RL ++ N++N T G +R V FSE Sbjct: 4 LSSLNIAASGMAAERLRLDVISQNVANAKTTRTEDGTPYRRQVVLFSE 51 Score = 40.2 bits (92), Expect = 0.25, Method: Composition-based stats. Identities = 5/43 (11%), Positives = 16/43 (37%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G+ N + E + T+ + + +++ + A+ Sbjct: 114 GYYYLPNVDVAEEEMDAMAATRSYEANLAVLNAVKSMAQTALS 156 >gi|118474843|ref|YP_891880.1| flagellar basal body rod protein FlgC [Campylobacter fetus subsp. fetus 82-40] gi|118414069|gb|ABK82489.1| flagellar basal-body rod protein FlgC [Campylobacter fetus subsp. fetus 82-40] Length = 164 Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 9/45 (20%), Positives = 19/45 (42%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 G++ N N + EM +I T+ + + + + AI + Sbjct: 118 GYIMLPNINPVIEMADLIEATRAYQANVSAFQSAKSIATSAIELL 162 Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 9/40 (22%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 11 AQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44 A R++ ++ N++N +T G +R +V F + Sbjct: 13 GLSAQRFRMNVISSNIANANTTRTAEGGPYRRREVIFKAI 52 >gi|303248256|ref|ZP_07334519.1| protein of unknown function DUF1078 domain protein [Desulfovibrio fructosovorans JJ] gi|302490394|gb|EFL50305.1| protein of unknown function DUF1078 domain protein [Desulfovibrio fructosovorans JJ] Length = 128 Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 7/41 (17%), Positives = 18/41 (43%) Query: 198 FLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 +E SN + + + MI ++ F + +I ++ + Sbjct: 84 MVEMSNVDLVRQNVNMIQDSRAFEANVAVIRTADEMAGTLL 124 Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 9/57 (15%), Positives = 25/57 (43%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS 57 M + + +A A+ ++ A+N++N +T G+++ + S + + Sbjct: 1 MTDAISAAQSALGAMSTSMAVTANNVANVNTDGYKSQDARLSTGPDGQGTQVSSIVE 57 >gi|319405399|emb|CBI79018.1| Flagellar basal-body rod protein flgC [Bartonella sp. AR 15-3] Length = 138 Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 11/75 (14%), Positives = 27/75 (36%), Gaps = 7/75 (9%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQKISFV 59 I A RL +A+N++N ++ G ++ V F ++ + ++ + Sbjct: 11 IATTGLSAQSTRLRVIAENLANVNSTGKSAGARPYQRKTVSFEAILNPYLDAQGVHVTRI 70 Query: 60 ASGKEYLSKEVGSFI 74 ++ K Sbjct: 71 STDKAPFIMRYEPGH 85 Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 20/42 (47%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G+++ N NS+ EM M + + + +I + + + I Sbjct: 92 GYVKYPNVNSIIEMADMREANRSYEANLQVIRQARDLVSQTI 133 >gi|319650643|ref|ZP_08004783.1| flagellar hook-associated protein K [Bacillus sp. 2_A_57_CT2] gi|317397824|gb|EFV78522.1| flagellar hook-associated protein K [Bacillus sp. 2_A_57_CT2] Length = 518 Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 14/107 (13%), Positives = 29/107 (27%), Gaps = 1/107 (0%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + L T N+SN +T G+ ++ FS+ +++ G Sbjct: 7 GLETARRGMFTQQSALYTTGHNISNANTPGYTRQRINFSQTEPYPGAGLNRPQIPGQMGT 66 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTD 110 + V ++ + E LT+ Sbjct: 67 GVEAGSVQRIREGFLDMQYRTESTK-MGYYGAMSESLTKMEEIMNEP 112 Score = 48.7 bits (114), Expect = 6e-04, Method: Composition-based stats. Identities = 8/41 (19%), Positives = 16/41 (39%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S + EM MI +N+ I ++ + + I + Sbjct: 474 SAVSLDEEMTNMIKFQHAYNASARNITVVDEMLDKIINGMG 514 >gi|23016627|ref|ZP_00056381.1| COG1558: Flagellar basal body rod protein [Magnetospirillum magnetotacticum MS-1] Length = 136 Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 8/46 (17%), Positives = 19/46 (41%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G++ N N + EM M + + + +I+ + + I + Sbjct: 91 GYVLAPNVNPLIEMMDMREAQRSYEANMNVINASRSLLSRTIDMLR 136 Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats. Identities = 16/110 (14%), Positives = 32/110 (29%), Gaps = 11/110 (10%) Query: 1 MQ---TSFNIGLAAQLALEQRLSTVADNMSN----TDTV-G--FRTIKVKFS-EVVGAIK 49 M S I ++ QRL +++N++N T G +R + F E+ A Sbjct: 1 MDELSKSTTIAISGMKVQSQRLRLISENLANSDSLAQTPEGLPYRRKVMTFKNELDRATG 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 + + A E+ + + + Sbjct: 61 TSLVKVDKVRADSSEFQRRYDPKHPAADRDGYVLAPNVNPLIEMMDMREA 110 >gi|126730138|ref|ZP_01745950.1| flagellar basal-body rod protein FlgC [Sagittula stellata E-37] gi|126709518|gb|EBA08572.1| flagellar basal-body rod protein FlgC [Sagittula stellata E-37] Length = 129 Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 25/45 (55%), Gaps = 4/45 (8%) Query: 2 QTSFNIGLA----AQLALEQRLSTVADNMSNTDTVGFRTIKVKFS 42 ++F+ L+ + RL V++N++N DT G+R ++ F+ Sbjct: 1 MSAFSDALSVTSGGLTSQAARLRVVSENIANVDTPGYRRKQLNFA 45 Score = 42.2 bits (97), Expect = 0.066, Method: Composition-based stats. Identities = 5/33 (15%), Positives = 13/33 (39%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 SN + M E+ + + + + D+ + Sbjct: 87 GSNVDLMIELADAREAQRSYEANLKMFDQTRQM 119 >gi|89068701|ref|ZP_01156087.1| flagellar basal body rod protein [Oceanicola granulosus HTCC2516] gi|89045664|gb|EAR51726.1| flagellar basal body rod protein [Oceanicola granulosus HTCC2516] Length = 131 Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 31/94 (32%), Gaps = 1/94 (1%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIKNDIDQKISFVA 60 + F I L R V++N++N DT G+R V F +V +S A Sbjct: 6 MSFFRIASQRMQWLGTRQQVVSENIANADTPGYRARDVSPFESMVTRSDAGSGPAVSNPA 65 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALES 94 + +L+G+ E Sbjct: 66 HITGSGRGAAVDVREDEGTWNVSLDGNTVVLEEQ 99 >gi|222824065|ref|YP_002575639.1| flagellar proximal rod protein FlgC [Campylobacter lari RM2100] gi|222539287|gb|ACM64388.1| flagellar proximal rod protein FlgC [Campylobacter lari RM2100] Length = 164 Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 9/47 (19%), Positives = 20/47 (42%) Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 +G++ N N + EM +I T+ + + + + AI + Sbjct: 117 QGYVAFPNINPVIEMADLIEATRAYQANVSAFTSTKTIAQSAIDLLR 163 Score = 42.2 bits (97), Expect = 0.061, Method: Composition-based stats. Identities = 9/39 (23%), Positives = 18/39 (46%), Gaps = 6/39 (15%) Query: 11 AQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43 A R++ ++ N++N +T G +R +V F Sbjct: 13 GLSAQRFRMNVISSNIANANTTRTAEGGPYRRREVIFKA 51 >gi|226939368|ref|YP_002794441.1| FlgK [Laribacter hongkongensis HLHK9] gi|226714294|gb|ACO73432.1| FlgK [Laribacter hongkongensis HLHK9] Length = 610 Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 25/68 (36%), Gaps = 1/68 (1%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + NIG+ A L+T + N+SN +T G+ V S + + V Sbjct: 1 MSLLNIGVTGLNAARAALTTTSQNVSNVNTAGYHRKAVNQSALYYG-PGQFGNTGNGVRV 59 Query: 62 GKEYLSKE 69 Y + Sbjct: 60 DDIYRVYD 67 Score = 37.5 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 5/41 (12%), Positives = 14/41 (34%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E ++ Q + + + ++ ++ I Sbjct: 570 SGVNLDEEAANLLKYQQAYQASSKVVQIAGSLFDSILQAIG 610 >gi|220934400|ref|YP_002513299.1| flagellar hook-associated protein FlgK [Thioalkalivibrio sp. HL-EbGR7] gi|219995710|gb|ACL72312.1| flagellar hook-associated protein FlgK [Thioalkalivibrio sp. HL-EbGR7] Length = 637 Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 25/53 (47%), Gaps = 1/53 (1%) Query: 1 MQTS-FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + IG++ LA ++ L +N++N+ T G+ ++ S + + Sbjct: 7 MSSGVLGIGVSGLLAFQRALGVTGNNIANSATEGYSRQRIDLSTQIPQFAGNG 59 >gi|197122865|ref|YP_002134816.1| flagellar basal-body rod protein FlgC [Anaeromyxobacter sp. K] gi|196172714|gb|ACG73687.1| flagellar basal-body rod protein FlgC [Anaeromyxobacter sp. K] Length = 140 Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 7/42 (16%), Positives = 20/42 (47%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 GF+ + N ++E+ ++ + + + T +D + A+ Sbjct: 95 GFVTLPDVNPVHEIVNLMSAQKAYEANATAVDTLKTMAQRAL 136 Score = 39.9 bits (91), Expect = 0.34, Method: Composition-based stats. Identities = 8/34 (23%), Positives = 17/34 (50%), Gaps = 2/34 (5%) Query: 1 MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTV 32 M ++ N+ + A R++ A N++N +T Sbjct: 1 MDFLSALNVSASGLAAERVRVNLAASNLANAETT 34 >gi|114562348|ref|YP_749861.1| flagellar hook-associated protein FlgK [Shewanella frigidimarina NCIMB 400] gi|114333641|gb|ABI71023.1| flagellar hook-associated protein FlgK [Shewanella frigidimarina NCIMB 400] Length = 642 Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 15/126 (11%), Positives = 40/126 (31%), Gaps = 1/126 (0%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 NI A + +L ++N++N +T G+ S + + S Sbjct: 3 IDLLNIARTGVQASQAQLGVTSNNIANANTEGYNRQVATQSSLESQRLGNSFYGTGTYVS 62 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 + + E + + + + ++ S I ++ G+ + + ++ Sbjct: 63 DVKRVYNEFAARELRIGQTSMS-AAETSYSKLSELDEIYSQIGKMVPENLNNFFASINSV 121 Query: 122 PVLDMA 127 L Sbjct: 122 ADLPTD 127 >gi|332558502|ref|ZP_08412824.1| FlgK (HAP1) [Rhodobacter sphaeroides WS8N] gi|332276214|gb|EGJ21529.1| FlgK (HAP1) [Rhodobacter sphaeroides WS8N] Length = 1363 Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 30/79 (37%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + +I + L+ LS A+N++N +T G+ + ++V G + S Sbjct: 1 MSILDIARSGLLSYRSALSVTAENIANVNTEGYVRREAVLAQVPGGQISPTSAATSGQGV 60 Query: 62 GKEYLSKEVGSFISTGTEL 80 E + + ++ Sbjct: 61 RVEDVRRAFDGLVAQRLRT 79 >gi|300716216|ref|YP_003741019.1| cell-proximal portion of basal-body rod [Erwinia billingiae Eb661] gi|299062052|emb|CAX59168.1| Cell-proximal portion of basal-body rod [Erwinia billingiae Eb661] Length = 134 Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 10/92 (10%), Positives = 32/92 (34%) Query: 148 ISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSM 207 K + G VR P E + + +G+++ N + + Sbjct: 40 QPYVAKQVVFQTDAVPGSPTGGVRVAQVVDDPTPAKLVYEPGNPMADAKGYVKMPNVDVV 99 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E + ++ + + +++ ++ M++ + Sbjct: 100 GETVNTMSASRSYQANVEVLNTVKQMMMKTLT 131 Score = 37.5 bits (85), Expect = 1.8, Method: Composition-based stats. Identities = 15/105 (14%), Positives = 26/105 (24%), Gaps = 7/105 (6%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS-EVVGAIKNDIDQ 54 F+I +A A QRL+ A N++N G + +V F + V + Sbjct: 4 LNIFDIAGSAMNAQSQRLNVSASNLANADSVTGPDGQPYVAKQVVFQTDAVPGSPTGGVR 63 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 V + + Sbjct: 64 VAQVVDDPTPAKLVYEPGNPMADAKGYVKMPNVDVVGETVNTMSA 108 >gi|218887610|ref|YP_002436931.1| flagellar hook-associated protein FlgK [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758564|gb|ACL09463.1| flagellar hook-associated protein FlgK [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 702 Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 28/68 (41%), Gaps = 2/68 (2%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV--VGAIKNDIDQKISFVA 60 + N+G + LA + + T +N++N +TVG+ V+F E + I Sbjct: 6 SLLNMGQLSLLANQTAIQTTGNNIANVNTVGYSRQAVRFEEYPALDGFPGQIGTGAYAAE 65 Query: 61 SGKEYLSK 68 + + Sbjct: 66 VYRYFNGF 73 Score = 42.9 bits (99), Expect = 0.041, Method: Composition-based stats. Identities = 6/38 (15%), Positives = 14/38 (36%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N EM ++ + + L+ ++ M + Sbjct: 661 SSGVNLDEEMASLVKFQHAYKAAAKLVTTADQMMQTLL 698 >gi|11136619|gb|AAG31286.1|AF317649_1 flagellar hook-associated protein 1 [Rhodobacter sphaeroides] Length = 1363 Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 30/79 (37%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + +I + L+ LS A+N++N +T G+ + ++V G + S Sbjct: 1 MSILDIARSGLLSYRSALSVTAENIANVNTEGYVRREAVLAQVPGGQISPTSAATSGQGV 60 Query: 62 GKEYLSKEVGSFISTGTEL 80 E + + ++ Sbjct: 61 RVEDVRRAFDGLVAQRLRT 79 >gi|332533169|ref|ZP_08409038.1| flagellar hook-associated protein FlgK [Pseudoalteromonas haloplanktis ANT/505] gi|332037451|gb|EGI73905.1| flagellar hook-associated protein FlgK [Pseudoalteromonas haloplanktis ANT/505] Length = 667 Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 36/94 (38%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 NI + A + L T + N++N +T G+ + +F+ +V + Sbjct: 4 NLLNIASSGVRASSELLQTTSKNIANVNTEGYVRERTEFTTMVDNQVGRGETYRLLNEFA 63 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESPR 96 + L+++ + + A D F+ ES Sbjct: 64 QSQLNRDTSNKSFFDQFITEANRVDTIFSEESNN 97 >gi|167644972|ref|YP_001682635.1| flagellar hook-associated protein FlgK [Caulobacter sp. K31] gi|167347402|gb|ABZ70137.1| flagellar hook-associated protein FlgK [Caulobacter sp. K31] Length = 704 Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 22/46 (47%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50 N+ + +A + L V+DN++N +T G+ + S +V Sbjct: 7 LNVATSGMMAAQTGLRVVSDNIANINTAGYVRKTIAQSNLVSNGMG 52 Score = 38.3 bits (87), Expect = 0.85, Method: Composition-based stats. Identities = 7/36 (19%), Positives = 11/36 (30%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 N E+ + Q FN+ LI + Sbjct: 667 VNLDEELVNLTTYQQAFNASARLIQATKDMFDVLTN 702 >gi|126462478|ref|YP_001043592.1| flagellar hook-associated protein FlgK [Rhodobacter sphaeroides ATCC 17029] gi|126104142|gb|ABN76820.1| flagellar hook-associated protein FlgK [Rhodobacter sphaeroides ATCC 17029] Length = 1363 Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 30/79 (37%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + +I + L+ LS A+N++N +T G+ + ++V G + S Sbjct: 1 MSILDIARSGLLSYRSALSVTAENIANVNTEGYVRREAVLAQVPGGQISPTSAATSGQGV 60 Query: 62 GKEYLSKEVGSFISTGTEL 80 E + + ++ Sbjct: 61 RVEDVRRAFDGLVAQRLRT 79 >gi|209963543|ref|YP_002296458.1| flagellar basal-body rod protein FlgC, putative [Rhodospirillum centenum SW] gi|209957009|gb|ACI97645.1| flagellar basal-body rod protein FlgC, putative [Rhodospirillum centenum SW] Length = 137 Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 35/110 (31%), Gaps = 11/110 (10%) Query: 1 MQ---TSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVV-GAIK 49 M +SF I + A RL VA+NM+N + G +R + F V+ A++ Sbjct: 1 MDPLASSFGIAASGMKAQATRLRVVAENMANASSTGETPGADPYRRKTIVFDSVLDRALR 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 D + + ++ + + L Sbjct: 61 ADTVRVKTIGRDSSDFRLSYEPGHPAADAKGYVKLPNVNTLVEMMDMREA 110 Score = 44.1 bits (102), Expect = 0.015, Method: Composition-based stats. Identities = 7/46 (15%), Positives = 20/46 (43%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G+++ N N++ EM M + + + ++ + + I + Sbjct: 91 GYVKLPNVNTLVEMMDMREAGRSYEANLNVLQQARGMLGRTIDMLR 136 >gi|116252321|ref|YP_768159.1| hypothetical protein RL2575 [Rhizobium leguminosarum bv. viciae 3841] gi|115256969|emb|CAK08063.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae 3841] Length = 101 Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 20/38 (52%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44 L+ A R+S +A+N++N+ T G+ + + V Sbjct: 9 TALSGMRAQTTRVSAIANNIANSSTPGYARLNTSLTSV 46 >gi|86157822|ref|YP_464607.1| flagellar basal-body rod protein FlgC [Anaeromyxobacter dehalogenans 2CP-C] gi|220917656|ref|YP_002492960.1| flagellar basal-body rod protein FlgC [Anaeromyxobacter dehalogenans 2CP-1] gi|85774333|gb|ABC81170.1| flagellar basal-body rod protein FlgC [Anaeromyxobacter dehalogenans 2CP-C] gi|219955510|gb|ACL65894.1| flagellar basal-body rod protein FlgC [Anaeromyxobacter dehalogenans 2CP-1] Length = 140 Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 7/42 (16%), Positives = 20/42 (47%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 GF+ + N ++E+ ++ + + + T +D + A+ Sbjct: 95 GFVTLPDVNPVHEIVNLMSAQKAYEANATAVDTLKTMAQRAL 136 Score = 39.9 bits (91), Expect = 0.34, Method: Composition-based stats. Identities = 8/34 (23%), Positives = 17/34 (50%), Gaps = 2/34 (5%) Query: 1 MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTV 32 M ++ N+ + A R++ A N++N +T Sbjct: 1 MDFLSALNVSASGLAAERVRVNLAASNLANAETT 34 >gi|125972983|ref|YP_001036893.1| flagellar basal-body rod protein FlgB [Clostridium thermocellum ATCC 27405] gi|125713208|gb|ABN51700.1| flagellar basal-body rod protein FlgB [Clostridium thermocellum ATCC 27405] Length = 134 Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 4/70 (5%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 + A R ++ N++N DT G++ V F E + ND KI + + E++ Sbjct: 15 SLDAALLRNEAISQNIANVDTTGYKRKTVAFEEYL----NDARAKIKGIRTRPEHIPVGA 70 Query: 71 GSFISTGTEL 80 + ++ Sbjct: 71 RDVMDIDIKV 80 >gi|325916941|ref|ZP_08179185.1| flagellar hook-associated protein FlgK [Xanthomonas vesicatoria ATCC 35937] gi|325536844|gb|EGD08596.1| flagellar hook-associated protein FlgK [Xanthomonas vesicatoria ATCC 35937] Length = 624 Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 27/42 (64%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 + + G +A +A ++ LSTV+ N++N +T G+ +V+F+ Sbjct: 1 MSIMSTGTSALIAFQRALSTVSHNVANINTEGYSRQRVEFAT 42 >gi|262276419|ref|ZP_06054228.1| flagellar basal-body rod protein FlgC [Grimontia hollisae CIP 101886] gi|262220227|gb|EEY71543.1| flagellar basal-body rod protein FlgC [Grimontia hollisae CIP 101886] Length = 136 Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 23/43 (53%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N M EM MI ++ + + + + +++ ++ ++ Sbjct: 91 GYIYKPNVNVMEEMANMISASRSYQTNVEVAEASKQMLMRTLQ 133 Score = 35.6 bits (80), Expect = 5.6, Method: Composition-based stats. Identities = 11/82 (13%), Positives = 26/82 (31%), Gaps = 6/82 (7%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56 FN+ +A A RL+T + N++N ++V ++ F+ + + + Sbjct: 5 NVFNVTGSAMSAESVRLNTTSSNLANANSVSSSAAETYKARHPVFAAELNRFQQGASVPV 64 Query: 57 SFVASGKEYLSKEVGSFISTGT 78 + Sbjct: 65 QVKGIVESQKPLRAEYNPEHPM 86 >gi|239834444|ref|ZP_04682772.1| flagellar basal-body rod protein FlgC [Ochrobactrum intermedium LMG 3301] gi|239822507|gb|EEQ94076.1| flagellar basal-body rod protein FlgC [Ochrobactrum intermedium LMG 3301] Length = 140 Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 8/47 (17%), Positives = 20/47 (42%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G++ N N + EM M + + + ++ + + + I + S Sbjct: 93 GYVRYPNVNMVVEMADMREANRSYEANLQVVKQARELISMTIDLLRS 139 Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 14/106 (13%), Positives = 32/106 (30%), Gaps = 8/106 (7%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQ 54 Q++ I + A RL V++N++N + +R V F + + Sbjct: 7 QSTLKIAASGLSAQSTRLRIVSENIANAQSTAKTADADPYRRKTVSFRTELEQGTGAAEV 66 Query: 55 KISFVA-SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 +I+ V ++ + S + + Sbjct: 67 RIAEVGKDTSPFIEQYEPSHPAADERGYVRYPNVNMVVEMADMREA 112 >gi|312876493|ref|ZP_07736476.1| flagellar basal-body rod protein FlgB [Caldicellulosiruptor lactoaceticus 6A] gi|311796704|gb|EFR13050.1| flagellar basal-body rod protein FlgB [Caldicellulosiruptor lactoaceticus 6A] Length = 133 Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 9/60 (15%), Positives = 21/60 (35%) Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76 +R +++N++N DT G++ + F + N + + S Sbjct: 20 KRNEIISNNIANADTPGYKAKDLDFEAFLQKSLNQEENLELVTTDERHIKESSSSQDNSI 79 >gi|256004780|ref|ZP_05429755.1| flagellar basal-body rod protein FlgB [Clostridium thermocellum DSM 2360] gi|255991230|gb|EEU01337.1| flagellar basal-body rod protein FlgB [Clostridium thermocellum DSM 2360] gi|316940781|gb|ADU74815.1| flagellar basal-body rod protein FlgB [Clostridium thermocellum DSM 1313] Length = 134 Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 4/70 (5%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 + A R ++ N++N DT G++ V F E + ND KI + + E++ Sbjct: 15 SLDAALLRNEAISQNIANVDTPGYKRKTVAFEEYL----NDARAKIKGIRTRPEHIPVGA 70 Query: 71 GSFISTGTEL 80 + ++ Sbjct: 71 RDVMDIDIKV 80 >gi|281417194|ref|ZP_06248214.1| flagellar basal-body rod protein FlgB [Clostridium thermocellum JW20] gi|281408596|gb|EFB38854.1| flagellar basal-body rod protein FlgB [Clostridium thermocellum JW20] Length = 134 Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 4/70 (5%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 + A R ++ N++N DT G++ V F E + ND KI + + E++ Sbjct: 15 SLDAALLRNEAISQNIANVDTPGYKRKTVAFEEYL----NDARAKIKGIRTRPEHIPVGA 70 Query: 71 GSFISTGTEL 80 + ++ Sbjct: 71 RDVMDIDIKV 80 >gi|20806999|ref|NP_622170.1| flagellar hook-associated protein FlgK [Thermoanaerobacter tengcongensis MB4] gi|20515482|gb|AAM23774.1| Flagellar hook-associated protein [Thermoanaerobacter tengcongensis MB4] Length = 482 Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 7/54 (12%), Positives = 17/54 (31%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56 I ++ L N++N +T G+ V + + + + Sbjct: 5 QGLEIAKTGLFVSQKALEVTGHNIANANTPGYTRQVVDMASIAPPTTFGMYDQW 58 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 6/41 (14%), Positives = 16/41 (39%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S + EM M+ + + + +I ++ + I + Sbjct: 438 SGVSLDEEMTNMLKYQKSYAACARVITAMDELIDTVINRMG 478 >gi|254255085|ref|ZP_04948402.1| Flagellar basal body rod protein [Burkholderia dolosa AUO158] gi|124899730|gb|EAY71573.1| Flagellar basal body rod protein [Burkholderia dolosa AUO158] Length = 133 Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 22/43 (51%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G + SN +++ EM M+ ++ F++ ++ + + +R Sbjct: 87 GMVYYSNVSAVEEMTDMMAASRAFSTNAEVLSRVKAMQQDLLR 129 Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 5/44 (11%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVG-----FRTIKVKFSEVV 45 I +A A RL T+A N++N DT G +R K F+ V Sbjct: 10 IAGSAMAAQTVRLDTIASNLANADTAGTEGTAYRARKPVFAAVY 53 >gi|222112279|ref|YP_002554543.1| flagellar hook-associated protein flgk [Acidovorax ebreus TPSY] gi|221731723|gb|ACM34543.1| flagellar hook-associated protein FlgK [Acidovorax ebreus TPSY] Length = 672 Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 20/51 (39%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 + N+G A LA + L T N++N T G+ V V G Sbjct: 1 MSLLNVGARALLANQVALQTTGHNIANVSTAGYSRQNVAMETVQGQFTGSG 51 Score = 42.2 bits (97), Expect = 0.071, Method: Composition-based stats. Identities = 6/41 (14%), Positives = 15/41 (36%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E ++I Q + + ++ + I+ + Sbjct: 631 SGVNLDEEAARLIQYQQAYQASAKMLQIAQNIFDNLIQTMG 671 >gi|302872574|ref|YP_003841210.1| flagellar basal-body rod protein FlgB [Caldicellulosiruptor obsidiansis OB47] gi|302575433|gb|ADL43224.1| flagellar basal-body rod protein FlgB [Caldicellulosiruptor obsidiansis OB47] Length = 133 Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 9/60 (15%), Positives = 22/60 (36%) Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76 +R +++N++N DT G++ + F + N + + + S Sbjct: 20 KRNEIISNNIANADTPGYKAKDLNFEAFLQRSFNQEESLELVTTNERHIKESSSSPDNSI 79 >gi|126668556|ref|ZP_01739510.1| flagellar basal-body rod protein C [Marinobacter sp. ELB17] gi|126626961|gb|EAZ97604.1| flagellar basal-body rod protein C [Marinobacter sp. ELB17] Length = 147 Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 18/43 (41%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N EM M+ ++ F +++ + M + Sbjct: 101 GYVYYPNVNVAEEMADMMSSSRSFQMNVDIMNTAKSMMQRILT 143 Score = 39.5 bits (90), Expect = 0.42, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 6/58 (10%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDT----VG--FRTIKVKFSEVVGAIKNDIDQ 54 F+I + A RL+T A N++N +T G +R K F+ V ++ N Sbjct: 5 NIFDIAGSGMTAQSLRLNTTASNIANAETASSSTGETYRARKPVFAAVQQSLLNGNQP 62 >gi|292487937|ref|YP_003530812.1| flagellar basal-body rod protein FlgC [Erwinia amylovora CFBP1430] gi|292899156|ref|YP_003538525.1| flagellar basal-body rod protein [Erwinia amylovora ATCC 49946] gi|291199004|emb|CBJ46115.1| flagellar basal-body rod protein [Erwinia amylovora ATCC 49946] gi|291553359|emb|CBA20404.1| Flagellar basal-body rod protein flgC [Erwinia amylovora CFBP1430] gi|312172058|emb|CBX80315.1| Flagellar basal-body rod protein flgC [Erwinia amylovora ATCC BAA-2158] Length = 134 Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 11/92 (11%), Positives = 33/92 (35%) Query: 148 ISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSM 207 K + + G VR P E + + RG+++ N + + Sbjct: 40 QPYVAKQVVFQTNAAPGSPTGGVRVAEVIDDPTPAKLVYEPGNPMADARGYIKMPNVDVV 99 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E + ++ + + +++ ++ M++ + Sbjct: 100 AETVNSMSASRSYQANVEVLNTVKQMMMKTLT 131 >gi|189426324|ref|YP_001953501.1| flagellar hook-associated protein FlgK [Geobacter lovleyi SZ] gi|189422583|gb|ACD96981.1| flagellar hook-associated protein FlgK [Geobacter lovleyi SZ] Length = 465 Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 8/49 (16%), Positives = 18/49 (36%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 IG + V++N++N +T G+ ++ + N Sbjct: 7 LQIGTTGMRVYQVATEVVSENIANVNTPGYSRQRIVLETAEASTHNGFP 55 Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 5/39 (12%), Positives = 15/39 (38%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +S + E+ ++ + + + LI + A+ Sbjct: 424 NSGVSLDEELTDLMKYQRSYQACAKLITTAGDMLDIAVN 462 >gi|297538902|ref|YP_003674671.1| flagellar hook-associated protein FlgK [Methylotenera sp. 301] gi|297258249|gb|ADI30094.1| flagellar hook-associated protein FlgK [Methylotenera sp. 301] Length = 650 Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 20/173 (11%), Positives = 41/173 (23%), Gaps = 1/173 (0%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M +IG +A A + LST N++N T G+ + +V A + Sbjct: 1 MADILSIGKSALAAAQVGLSTTGHNIANASTPGY-SRQVVIQAAAQAQSSGSGYIGQGTE 59 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + + + + S +L+ ++ Sbjct: 60 VASITRAFNEILSKQVVNSQAASSSSQVYASQLSNINNMLSDASAGLNPAISDFFNSVSD 119 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRE 173 Q V + + + + S V Sbjct: 120 LAANPSDIPTRQSMLSYAQSLVNRLQSTNSSLNEVRSDVNTQLTGSVNLVNTY 172 Score = 36.8 bits (83), Expect = 2.4, Method: Composition-based stats. Identities = 14/189 (7%), Positives = 51/189 (26%), Gaps = 5/189 (2%) Query: 52 IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDD 111 + + + + +S + + P G +T ++ Sbjct: 463 PPTGSNLTGTLGVTYASGMPGTLSMAPSTQPVTVTVSGVSTVYPAGSPITYTSGATISVG 522 Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV-DMSQGFV 170 G + +G D ++ P + + + T + ++ G Sbjct: 523 GLSFAITGTPANGDKFTLSASGPGDNRNGLLLADLQKQGTINNSTTTYSSAFAELVNGVG 582 Query: 171 RRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + + + + + ++ +S N E ++ Q + + ++ Sbjct: 583 NKTRELNITSTSEAKVLEQATAAMQS----ESGVNLDEEATNLLRYQQAYQAAGKMMQIA 638 Query: 231 EKSMLEAIR 239 + ++ Sbjct: 639 SQLFDTLLQ 647 >gi|157373209|ref|YP_001471809.1| flagellar basal-body rod protein FlgC [Shewanella sediminis HAW-EB3] gi|157315583|gb|ABV34681.1| flagellar basal-body rod protein FlgC [Shewanella sediminis HAW-EB3] Length = 139 Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 10/48 (20%), Positives = 28/48 (58%), Gaps = 1/48 (2%) Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 +G++ SN N++ EM M+ ++ F + ++++ +SM + + + + Sbjct: 92 QGYVAYSNVNTVEEMADMMAASRSFETSVEVMNQA-RSMQQGLLQLGT 138 >gi|268680292|ref|YP_003304723.1| flagellar basal-body rod protein FlgC [Sulfurospirillum deleyianum DSM 6946] gi|268618323|gb|ACZ12688.1| flagellar basal-body rod protein FlgC [Sulfurospirillum deleyianum DSM 6946] Length = 163 Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 18/42 (42%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N N + EM +I T+ + + + + AI Sbjct: 118 GYVAYPNINPVIEMANLIEATRAYQANVSAFQSAKAIAQSAI 159 Score = 41.8 bits (96), Expect = 0.092, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 22/49 (44%), Gaps = 6/49 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44 +SF+I A R+ ++ N++N +T G ++ V F V Sbjct: 4 LSSFDISSYGLSAQRFRMDLISSNIANANTTRTSEGGPYQRKDVVFKAV 52 >gi|54297180|ref|YP_123549.1| flagellar basal body rod protein FlgC [Legionella pneumophila str. Paris] gi|53750965|emb|CAH12376.1| Flagellar basal-body rod protein FlgC [Legionella pneumophila str. Paris] Length = 140 Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 22/43 (51%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 GF+ SN N + EM +I ++ + L++ ++ M ++ Sbjct: 95 GFVYTSNINYVEEMANIISASRSYQMNIELLNTTKQLMQRTLQ 137 >gi|209964219|ref|YP_002297134.1| flagellar basal-body rod protein FlgC [Rhodospirillum centenum SW] gi|209957685|gb|ACI98321.1| flagellar basal-body rod protein FlgC [Rhodospirillum centenum SW] Length = 136 Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 24/71 (33%), Gaps = 6/71 (8%) Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 + P P D G++ N NS+ E M + + + +ID + Sbjct: 72 RSDFQRRYDPGHPSADAE------GYVLTPNVNSLVESMDMREAQRSYEANLNVIDTTRQ 125 Query: 233 SMLEAIRNIAS 243 + I + S Sbjct: 126 MLTRTIELLRS 136 Score = 43.7 bits (101), Expect = 0.022, Method: Composition-based stats. Identities = 13/82 (15%), Positives = 28/82 (34%), Gaps = 7/82 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTD----TVG---FRTIKVKFSEVVGAIKNDIDQ 54 + ++ A RL +A+N++N + T G +R V F V+ Sbjct: 4 MNTLSLSAAGLKVQGTRLRVIAENLANANSTAPTPGDLPYRRKVVLFQNVLNRELGMPTV 63 Query: 55 KISFVASGKEYLSKEVGSFIST 76 K+ + + + + Sbjct: 64 KVKKIDVDRSDFQRRYDPGHPS 85 >gi|58582202|ref|YP_201218.1| flagellar hook-associated protein FlgK [Xanthomonas oryzae pv. oryzae KACC10331] gi|188576762|ref|YP_001913691.1| flagellar hook-associated protein FlgK [Xanthomonas oryzae pv. oryzae PXO99A] gi|188576954|ref|YP_001913883.1| flagellar hook-associated protein FlgK [Xanthomonas oryzae pv. oryzae PXO99A] gi|58426796|gb|AAW75833.1| flagellar protein [Xanthomonas oryzae pv. oryzae KACC10331] gi|188521214|gb|ACD59159.1| flagellar hook-associated protein FlgK [Xanthomonas oryzae pv. oryzae PXO99A] gi|188521406|gb|ACD59351.1| flagellar hook-associated protein FlgK [Xanthomonas oryzae pv. oryzae PXO99A] Length = 624 Score = 49.5 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 27/42 (64%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 + + G +A +A ++ LSTV+ N++N +T G+ +V+F+ Sbjct: 1 MSIMSTGTSALIAFQRALSTVSHNVANINTEGYSRQRVEFAT 42 >gi|291558197|emb|CBL35314.1| flagellar basal-body rod protein FlgC [Eubacterium siraeum V10Sc8a] Length = 160 Score = 49.5 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 6/48 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43 +S NI + A RL ++ N++N T G +R V FSE Sbjct: 4 LSSLNIAASGMAAERLRLDVISQNVANAKTTRTEDGTPYRRQVVLFSE 51 Score = 41.0 bits (94), Expect = 0.14, Method: Composition-based stats. Identities = 5/43 (11%), Positives = 16/43 (37%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G+ N + E + T+ + + +++ + A+ Sbjct: 114 GYYYLPNVDVAEEQMDAMAATRSYEANLAVLNAVKSMAQTALS 156 >gi|163794133|ref|ZP_02188106.1| flagellar basal body rod protein [alpha proteobacterium BAL199] gi|159180747|gb|EDP65266.1| flagellar basal body rod protein [alpha proteobacterium BAL199] Length = 136 Score = 49.5 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 12/73 (16%), Positives = 30/73 (41%), Gaps = 6/73 (8%) Query: 171 RRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 R + P PL D G+++ N N++ EM M + + + ++I+ + Sbjct: 70 RDQGDFNIVYEPHHPLADDK------GYIKMPNVNTLIEMTDMREAERSYEANVSVIESS 123 Query: 231 EKSMLEAIRNIAS 243 + + + + + Sbjct: 124 KSLIERTLELLRA 136 Score = 44.5 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 15/109 (13%), Positives = 31/109 (28%), Gaps = 10/109 (9%) Query: 1 MQ--TSFNIGLAAQLALEQRLSTVADNMSNT----DTVG---FRTIKVKFS-EVVGAIKN 50 M + I + A RL VA+N++N +T +R + F E+ I Sbjct: 1 MDLTNAIKISASGMRAQGTRLRVVAENVANAESLGNTAADDPYRRKTITFENELDRKINA 60 Query: 51 DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 D+ + ++ + + + Sbjct: 61 DMVRISKIGRDQGDFNIVYEPHHPLADDKGYIKMPNVNTLIEMTDMREA 109 >gi|153011526|ref|YP_001372740.1| flagellar basal body rod protein FlgC [Ochrobactrum anthropi ATCC 49188] gi|151563414|gb|ABS16911.1| flagellar basal-body rod protein FlgC [Ochrobactrum anthropi ATCC 49188] Length = 140 Score = 49.5 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 8/47 (17%), Positives = 20/47 (42%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G++ N N + EM M + + + ++ + + + I + S Sbjct: 93 GYVRYPNVNMVVEMADMREANRSYEANLQVVKQARELISMTIDLLRS 139 Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 14/106 (13%), Positives = 32/106 (30%), Gaps = 8/106 (7%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQ 54 Q++ I + A RL V++N++N + +R V F + + Sbjct: 7 QSTLKIAASGLSAQSTRLRIVSENIANAQSTAETADADPYRRKTVSFRTELEQGTGAAEV 66 Query: 55 KISFVA-SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 +I+ V ++ + S + + Sbjct: 67 RIAEVGKDTSPFIEQYEPSHPAADERGYVRYPNVNMVVEMADMREA 112 >gi|312135857|ref|YP_004003195.1| flagellar basal-body rod protein flgb [Caldicellulosiruptor owensensis OL] gi|311775908|gb|ADQ05395.1| flagellar basal-body rod protein FlgB [Caldicellulosiruptor owensensis OL] Length = 133 Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats. Identities = 9/60 (15%), Positives = 22/60 (36%) Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76 +R +++N++N DT G++ + F + N + + + S Sbjct: 20 KRNEIISNNIANADTPGYKAKDLNFEAFLQRSFNQEESLELVTTNERHIKESSSNPDNSI 79 >gi|118589983|ref|ZP_01547387.1| flagellar basal-body rod protein C [Stappia aggregata IAM 12614] gi|118437480|gb|EAV44117.1| flagellar basal-body rod protein C [Stappia aggregata IAM 12614] Length = 138 Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats. Identities = 12/97 (12%), Positives = 35/97 (36%) Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNAN 205 G+ + K I +S + V + G + + G+++ N N Sbjct: 41 GDDPYRRKTITFESEFSRAVQANLVSVKGIGEDKAEFAVEYDPGHPAADENGYVKMPNVN 100 Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 ++ E+ M + + + ++ + + ++ I + Sbjct: 101 TLLELADMRETNRSYEANLKVMTQAREMVMRNIDLLR 137 Score = 39.9 bits (91), Expect = 0.36, Method: Composition-based stats. Identities = 11/51 (21%), Positives = 19/51 (37%), Gaps = 7/51 (13%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAI 48 I A A +RL V++N++N + G +R + F Sbjct: 9 LQISGAGLRAQSERLRVVSENLANARSTGEAAGDDPYRRKTITFESEFSRA 59 >gi|330502740|ref|YP_004379609.1| flagellar hook-associated protein FlgK [Pseudomonas mendocina NK-01] gi|328917026|gb|AEB57857.1| flagellar hook-associated protein FlgK [Pseudomonas mendocina NK-01] Length = 681 Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 19/52 (36%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M NIGL+ A + L+ N+ N +T GF + + Sbjct: 1 MADLLNIGLSGLAANKTSLAVTGHNIVNVNTPGFSRQETIQATRTPQFSGAG 52 >gi|221636051|ref|YP_002523927.1| flagellar basal-body rod protein FlgB [Thermomicrobium roseum DSM 5159] gi|221157824|gb|ACM06942.1| flagellar basal-body rod protein FlgB [Thermomicrobium roseum DSM 5159] Length = 138 Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 27/54 (50%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65 AL R A N++N +T GFR V+F +++ A+ N ++ V + + Sbjct: 15 LDALALRQQVTASNVANAETPGFRGQAVRFEDLLQAMLNGTFARLPLVRTDSRH 68 >gi|120613066|ref|YP_972744.1| flagellar hook-associated protein FlgK [Acidovorax citrulli AAC00-1] gi|120591530|gb|ABM34970.1| flagellar hook-associated protein FlgK [Acidovorax citrulli AAC00-1] Length = 642 Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 21/51 (41%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 + N+G A LA + L T N++N +T G+ + V G Sbjct: 1 MSLLNVGARALLANQVALQTTGHNIANVNTAGYSRQTLSLQTVQGQFTGGG 51 Score = 42.9 bits (99), Expect = 0.036, Method: Composition-based stats. Identities = 19/149 (12%), Positives = 37/149 (24%), Gaps = 9/149 (6%) Query: 99 ILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158 T + G ++ G D V + + G S + Sbjct: 498 AYTPGQPITID--GWQITLKGTPGTGDTVKVGNVLDAQYGDAYKRNAGNASAIDALGDVK 555 Query: 159 GLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLED-----SNANSMYEMGQM 213 MS G+ + T+ LE S N E ++ Sbjct: 556 MFDDATMSDGYAGLMAQVGTRMQNAK-YASDVSATISTN-LERDRTAVSGVNLDEEAAKL 613 Query: 214 IHLTQKFNSITTLIDENEKSMLEAIRNIA 242 I Q + + ++ + I+ + Sbjct: 614 IQYQQAYQASAKVLQIAQSIFDNLIQTMR 642 >gi|91201245|emb|CAJ74305.1| similar to flagellar hook-associated protein FlgK [Candidatus Kuenenia stuttgartiensis] Length = 653 Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats. Identities = 7/42 (16%), Positives = 17/42 (40%) Query: 200 EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 E S N E+ +I Q + + I ++ + + ++ Sbjct: 612 EVSGVNIDEELVTLIRFQQAYQASAKYISTVDRLINTLLNSL 653 Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 30/75 (40%), Gaps = 3/75 (4%) Query: 1 MQTS-FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE--VVGAIKNDIDQKIS 57 M +S IG++ LA ++ + A N+SN +T G+ V + + I Q + Sbjct: 1 MASSDIQIGMSGVLAAQRAMMVSAHNISNANTKGYTKQTVSLATRLPLQTTIGSIGQGVD 60 Query: 58 FVASGKEYLSKEVGS 72 V ++ Sbjct: 61 LVKIMRQKDDYLNSR 75 >gi|114777912|ref|ZP_01452826.1| probable flagellar hook-associated protein [Mariprofundus ferrooxydans PV-1] gi|114551699|gb|EAU54251.1| probable flagellar hook-associated protein [Mariprofundus ferrooxydans PV-1] Length = 575 Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats. Identities = 9/81 (11%), Positives = 34/81 (41%), Gaps = 2/81 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--IDQKISFVAS 61 S NI ++ ++ ++ V+ N++N +T G+ + + + + ++ Sbjct: 5 SLNIAASSLQTQQKSINVVSHNIANANTAGYSRQVADIATLTPESVGGLSLGRGVNVTGI 64 Query: 62 GKEYLSKEVGSFISTGTELDF 82 + + + G+++++ Sbjct: 65 SRIVDPMINSALSNNGSQMNY 85 Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 7/37 (18%), Positives = 15/37 (40%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N+ E+ MI + + + +I + M + Sbjct: 535 SGVNTDEELVSMIKFQRAYEASAKIITTTNQMMDSLL 571 >gi|84624094|ref|YP_451466.1| flagellar hook-associated protein FlgK [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|84368034|dbj|BAE69192.1| flagellar protein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 624 Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 27/42 (64%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 + + G +A +A ++ LSTV+ N++N +T G+ +V+F+ Sbjct: 1 MSIMSTGTSALIAFQRALSTVSHNVANINTEGYSRQRVEFAT 42 >gi|308050018|ref|YP_003913584.1| flagellar hook-associated protein FlgK [Ferrimonas balearica DSM 9799] gi|307632208|gb|ADN76510.1| flagellar hook-associated protein FlgK [Ferrimonas balearica DSM 9799] Length = 457 Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 24/59 (40%), Gaps = 4/59 (6%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 GL+ A + L+T ++N++N T G+ ++ +V A S V Sbjct: 1 MNMLGNGLSGLHAAQMHLATTSNNIANATTPGYSRQQL----LVSARPGGFMGAGSGVQ 55 Score = 42.2 bits (97), Expect = 0.061, Method: Composition-based stats. Identities = 6/38 (15%), Positives = 13/38 (34%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S N E +I Q + + +I ++ + Sbjct: 418 SAVNLDEEGINIIVYQQAYQANAKVISTADQLFQTMMT 455 >gi|291520177|emb|CBK75398.1| flagellar hook-associated protein FlgK [Butyrivibrio fibrisolvens 16/4] Length = 494 Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats. Identities = 9/37 (24%), Positives = 18/37 (48%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 I + + +++T A+N+SN +T G+ V Sbjct: 7 GLTIAASGLNTAQAQINTTANNISNVNTTGYSKQVVN 43 >gi|323492332|ref|ZP_08097485.1| flagellar hook-associated protein FlgK [Vibrio brasiliensis LMG 20546] gi|323313379|gb|EGA66490.1| flagellar hook-associated protein FlgK [Vibrio brasiliensis LMG 20546] Length = 457 Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 18/43 (41%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44 NI L+ A L A N+SN +T G+ + + V Sbjct: 1 MNLVNIALSGLNANRVALDVTAQNVSNINTPGYSRQQAMMTSV 43 >gi|149911704|ref|ZP_01900312.1| flagellar biosynthesis; cell-proximal portion of basal-body rod [Moritella sp. PE36] gi|149805234|gb|EDM65251.1| flagellar biosynthesis; cell-proximal portion of basal-body rod [Moritella sp. PE36] Length = 140 Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N N M EM MI ++ + + + D +K + + + Sbjct: 93 GYVYRPNVNIMEEMANMISASRSYQTNVQIADAAKKMLNKTL 134 Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 22/53 (41%), Gaps = 6/53 (11%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIK 49 F+I +A A RL+T A N++N ++V ++ F + Sbjct: 5 RVFDIAGSAMSAQSVRLNTTASNLANANSVSSSAGETYKARYPIFQAQLDQAN 57 >gi|88799019|ref|ZP_01114600.1| flagellar basal-body rod protein FlgC [Reinekea sp. MED297] gi|88778246|gb|EAR09440.1| flagellar basal-body rod protein FlgC [Reinekea sp. MED297] Length = 146 Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 19/43 (44%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N + EM M+ ++ F + + + M + + Sbjct: 101 GYVYYPNVNVVEEMADMMSASRSFTVNVEVFNTAKTLMQKTLT 143 Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 22/56 (39%), Gaps = 6/56 (10%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDI 52 F+I + A RL+T A N++N +V +R K F + + Sbjct: 5 NVFDISGSGMNAQSIRLNTTASNLANAQSVSSSIDETYRARKPVFQHIQSQYIDRS 60 >gi|289208112|ref|YP_003460178.1| flagellar basal-body rod protein FlgC [Thioalkalivibrio sp. K90mix] gi|288943743|gb|ADC71442.1| flagellar basal-body rod protein FlgC [Thioalkalivibrio sp. K90mix] Length = 139 Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 31/81 (38%), Gaps = 6/81 (7%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKI 56 FN +A A RL+TVA N++N +TV +R +V F V+ + Sbjct: 6 NLFNTSASALTAQSVRLNTVASNLANANTVATNPDEAYRAKQVLFQTVMNQADPNGASNG 65 Query: 57 SFVASGKEYLSKEVGSFISTG 77 VA E + + Sbjct: 66 VRVAGIDESQAPPQPHYEPNH 86 Score = 42.5 bits (98), Expect = 0.055, Method: Composition-based stats. Identities = 4/43 (9%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ + + EM M+ ++ + + +++ + + + ++ Sbjct: 93 GYIFRPAISVVEEMANMMSASRNYEANVEVMETSRQLLQRTLQ 135 >gi|52841449|ref|YP_095248.1| flagellar basal body rod protein FlgC [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|54294161|ref|YP_126576.1| flagellar basal body rod protein FlgC [Legionella pneumophila str. Lens] gi|148358804|ref|YP_001250011.1| flagellar basal body rod protein FlgC [Legionella pneumophila str. Corby] gi|296106849|ref|YP_003618549.1| flagellar basal-body rod protein FlgC [Legionella pneumophila 2300/99 Alcoy] gi|52628560|gb|AAU27301.1| flagellar basal body rod protein FlgC [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|53753993|emb|CAH15464.1| Flagellar basal-body rod protein FlgC [Legionella pneumophila str. Lens] gi|148280577|gb|ABQ54665.1| flagellar basal body rod protein FlgC [Legionella pneumophila str. Corby] gi|295648750|gb|ADG24597.1| flagellar basal-body rod protein FlgC [Legionella pneumophila 2300/99 Alcoy] gi|307609975|emb|CBW99504.1| flagellar basal-body rod protein FlgC [Legionella pneumophila 130b] Length = 140 Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 22/43 (51%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 GF+ SN N + EM +I ++ + L++ ++ M ++ Sbjct: 95 GFVYTSNINYVEEMANIISASRSYQMNIELLNTTKQLMQRTLQ 137 >gi|323341352|ref|ZP_08081596.1| hypothetical protein HMPREF0542_12027 [Lactobacillus ruminis ATCC 25644] gi|323091229|gb|EFZ33857.1| hypothetical protein HMPREF0542_12027 [Lactobacillus ruminis ATCC 25644] Length = 514 Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats. Identities = 11/55 (20%), Positives = 21/55 (38%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFV 59 + A + L T A N++NT+T G+ +V + + + V Sbjct: 8 LGTATSGITANQVALQTTAHNIANTNTDGYSRQRVHMTTKPPYVIAGTGTIGTGV 62 Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 15/42 (35%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N EM +I Q F + T ++ + + + Sbjct: 472 MSGVNINEEMSDVIKFQQGFQANTRVLSVIAEMLDTLVNKTG 513 >gi|145298488|ref|YP_001141329.1| flagellar basal body protein FlgB [Aeromonas salmonicida subsp. salmonicida A449] gi|142851260|gb|ABO89581.1| flagellar basal body protein FlgB [Aeromonas salmonicida subsp. salmonicida A449] Length = 132 Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats. Identities = 14/94 (14%), Positives = 34/94 (36%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIS 75 +R ++ N++N DT GF+ + FSE + ++ ++ + L + + Sbjct: 20 SKRAEVLSSNIANADTPGFKARDINFSEALAQAQHQQGFGMATTSEKHFALQSDAPGLMQ 79 Query: 76 TGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109 L ++ R L ++ + Sbjct: 80 YRNPLQPDTGDGNTVDVQQERSEFLRNSLEYQTS 113 >gi|328545507|ref|YP_004305616.1| flagellar basal-body rod protein FlgC [polymorphum gilvum SL003B-26A1] gi|326415248|gb|ADZ72311.1| Flagellar basal-body rod protein FlgC [Polymorphum gilvum SL003B-26A1] Length = 138 Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats. Identities = 7/42 (16%), Positives = 19/42 (45%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G+++ N N + EM M + + + ++ + ++ I Sbjct: 92 GYVKLPNVNLLVEMADMRETNRSYEANLKMMTQARTMVMRTI 133 Score = 41.4 bits (95), Expect = 0.099, Method: Composition-based stats. Identities = 8/29 (27%), Positives = 15/29 (51%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVG 33 I + A +RL V++N++N + G Sbjct: 9 LKISASGLQAQSERLRVVSENLANAQSTG 37 >gi|254478858|ref|ZP_05092223.1| flagellar hook-associated protein FlgK [Carboxydibrachium pacificum DSM 12653] gi|214035220|gb|EEB75929.1| flagellar hook-associated protein FlgK [Carboxydibrachium pacificum DSM 12653] Length = 484 Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats. Identities = 7/54 (12%), Positives = 17/54 (31%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56 I ++ L N++N +T G+ V + + + + Sbjct: 5 QGLEIAKTGLFVSQKALEVTGHNIANANTPGYTRQVVDMASIAPPTTFGMYDQW 58 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 6/42 (14%), Positives = 16/42 (38%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S + EM M+ + + + +I ++ + I + Sbjct: 439 TSGVSLDEEMTNMLKYQKSYAACARVITAMDELIDTIINRMG 480 >gi|187926948|ref|YP_001893293.1| flagellar hook-associated protein FlgK [Ralstonia pickettii 12J] gi|241665277|ref|YP_002983636.1| flagellar hook-associated protein FlgK [Ralstonia pickettii 12D] gi|187728702|gb|ACD29866.1| flagellar hook-associated protein FlgK [Ralstonia pickettii 12J] gi|240867304|gb|ACS64964.1| flagellar hook-associated protein FlgK [Ralstonia pickettii 12D] Length = 645 Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 27/83 (32%), Gaps = 2/83 (2%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE--VVGAIKNDIDQKISFVA 60 + NIG + L +N++N +T G+ + +E + A + Q + Sbjct: 4 SLLNIGATGLRVADINLQVTGNNIANANTPGYSRQEAVQTENIPLYAGVGYLGQGANVTT 63 Query: 61 SGKEYLSKEVGSFISTGTELDFA 83 + Y + A Sbjct: 64 VKRIYDQFLTAQVQNGQAATSAA 86 >gi|256376483|ref|YP_003100143.1| flagellar hook-associated protein FlgK [Actinosynnema mirum DSM 43827] gi|255920786|gb|ACU36297.1| flagellar hook-associated protein FlgK [Actinosynnema mirum DSM 43827] Length = 459 Score = 49.1 bits (115), Expect = 5e-04, Method: Composition-based stats. Identities = 4/39 (10%), Positives = 13/39 (33%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 N E+ M+ + + + ++ + + I Sbjct: 420 VNLDEELTSMLTYQRSYEAAARVMSAVDSMLDTLINRTG 458 Score = 43.3 bits (100), Expect = 0.027, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 17/42 (40%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44 + L A + L N++N T G+ +V+ + V Sbjct: 6 SGITSALGGMQAARRGLEVAGQNIANARTEGYSRQRVETAAV 47 >gi|256830170|ref|YP_003158898.1| flagellar hook-associated protein FlgK [Desulfomicrobium baculatum DSM 4028] gi|256579346|gb|ACU90482.1| flagellar hook-associated protein FlgK [Desulfomicrobium baculatum DSM 4028] Length = 697 Score = 49.1 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 15/74 (20%), Positives = 28/74 (37%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 + FNIG + A + + V +N+SN +T G+ V+F + + A+ Sbjct: 6 SLFNIGKQSLFANQAAIEVVGNNISNANTEGYSRQAVRFEDGYYISYSPGQLGTGVNAAE 65 Query: 63 KEYLSKEVGSFIST 76 E + Sbjct: 66 VIRYFDEFTEVMYN 79 Score = 43.7 bits (101), Expect = 0.023, Method: Composition-based stats. Identities = 8/37 (21%), Positives = 13/37 (35%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N EM +I + + LI E + + Sbjct: 657 SGVNLDEEMTNLIKFQHAYTAAAKLITTAESMLEVLL 693 >gi|225375315|ref|ZP_03752536.1| hypothetical protein ROSEINA2194_00940 [Roseburia inulinivorans DSM 16841] gi|225212804|gb|EEG95158.1| hypothetical protein ROSEINA2194_00940 [Roseburia inulinivorans DSM 16841] Length = 146 Score = 49.1 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 20/43 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N++ EM +I ++ + + TT + + + Sbjct: 101 GYVSYPNVNTVTEMTNLIDASRAYEANTTAFEAAKSIAQSGLS 143 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 6/47 (12%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43 +F+I + A R+ T+A+N++N +T G +R V F+E Sbjct: 5 QAFDISASGMTAERFRMDTIAENIANVNTTRTEDGTPYRRKIVTFAE 51 >gi|83309714|ref|YP_419978.1| flagellar basal body rod protein FlgC [Magnetospirillum magneticum AMB-1] gi|82944555|dbj|BAE49419.1| Flagellar basal body rod protein [Magnetospirillum magneticum AMB-1] Length = 136 Score = 49.1 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 8/46 (17%), Positives = 19/46 (41%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G++ N N + EM M + + + +I+ + + I + Sbjct: 91 GYVLAPNVNPLIEMMDMREAQRSYEANMNVINASRSLLSRTIEMLR 136 Score = 40.6 bits (93), Expect = 0.17, Method: Composition-based stats. Identities = 16/110 (14%), Positives = 33/110 (30%), Gaps = 11/110 (10%) Query: 1 MQ---TSFNIGLAAQLALEQRLSTVADNMSNTD----TV-G--FRTIKVKFS-EVVGAIK 49 M S ++ QRL +++N++N D T G +R + F E+ A Sbjct: 1 MDELSKSTQTAISGMKVQSQRLRVISENLANADSLAQTPEGLPYRRKVMTFKNELDRATG 60 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 ++ + A E+ + + + Sbjct: 61 TNVVKVDKVRADSAEFQRRYDPKHPAADRDGYVLAPNVNPLIEMMDMREA 110 >gi|317153716|ref|YP_004121764.1| flagellar basal-body rod protein FlgC [Desulfovibrio aespoeensis Aspo-2] gi|316943967|gb|ADU63018.1| flagellar basal-body rod protein FlgC [Desulfovibrio aespoeensis Aspo-2] Length = 145 Score = 49.1 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 23/43 (53%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ + N + EM M++ T+ + + I+ ++ +A++ Sbjct: 100 GYVYYPDINVVEEMTNMMNATRGYEANVQTIESVKQMFNKALQ 142 Score = 39.5 bits (90), Expect = 0.45, Method: Composition-based stats. Identities = 9/31 (29%), Positives = 16/31 (51%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32 T+ +IG + A L+ ++ NM+N T Sbjct: 4 MTALDIGASGLKAQRATLNVISMNMANMRTT 34 >gi|332798814|ref|YP_004460313.1| flagellar hook-associated protein FlgK [Tepidanaerobacter sp. Re1] gi|332696549|gb|AEE91006.1| flagellar hook-associated protein FlgK [Tepidanaerobacter sp. Re1] Length = 459 Score = 49.1 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 3/56 (5%) Query: 1 MQTSFN---IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 MQ+SF I A A ++ TVA N+SN +T G+ +V A + Sbjct: 1 MQSSFLGIEIAKTALFANQRAQQTVAHNVSNANTPGYSRQRVILEATHTAYGMGAN 56 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 7/42 (16%), Positives = 19/42 (45%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S+ + EM +MI +N+ + ++ ++ + I + Sbjct: 417 TSSVSLDEEMTKMIQYLHGYNAASRIVTTVDEMLDTIINRMG 458 >gi|322432998|ref|YP_004210247.1| flagellar basal-body rod protein FlgC [Acidobacterium sp. MP5ACTX9] gi|321165225|gb|ADW70929.1| flagellar basal-body rod protein FlgC [Acidobacterium sp. MP5ACTX9] Length = 148 Score = 49.1 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 11/65 (16%), Positives = 25/65 (38%) Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 P E K GF+ N + EM ++ T+ + + + ++ + ++I Sbjct: 84 TAAPVMRYEPGHPDADKDGFVAYPAINPVQEMVDLMGSTRAYQLNASAVSAAKQMIQQSI 143 Query: 239 RNIAS 243 + S Sbjct: 144 DILKS 148 Score = 39.9 bits (91), Expect = 0.33, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 31/110 (28%), Gaps = 14/110 (12%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDT----VG--FRTIKVKFSEV--------VGAIK 49 I +A A QR +A NM+N +T G F+ +V FS Sbjct: 6 MLQISGSALSAERQRSEVIAANMANAETTHTDTGGPFKRKEVVFSSASDSSFHLTFAKTG 65 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 + V + D +G + +P + Sbjct: 66 GLSGKTPGTVRISQIVDDTAAPVMRYEPGHPDADKDGFVAYPAINPVQEM 115 >gi|121596384|ref|YP_988280.1| flagellar basal body rod protein [Acidovorax sp. JS42] gi|120608464|gb|ABM44204.1| flagellar basal body rod protein [Acidovorax sp. JS42] Length = 101 Score = 49.1 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 20/49 (40%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK 49 M T I + A + RL + A N++N +T GFR V Sbjct: 1 MTTLAAIAQSGLQAAQLRLDSSAHNVANLNTPGFRRQTVDQQAAPAPGG 49 >gi|312879581|ref|ZP_07739381.1| flagellar basal-body rod protein FlgC [Aminomonas paucivorans DSM 12260] gi|310782872|gb|EFQ23270.1| flagellar basal-body rod protein FlgC [Aminomonas paucivorans DSM 12260] Length = 139 Score = 49.1 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 8/47 (17%), Positives = 22/47 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G++ N N + EM M+ ++ + + +++ + A+ + S Sbjct: 93 GYVAYPNVNVVREMADMLVASRAYEASVNVVETGKALWTSALEIMRS 139 Score = 43.3 bits (100), Expect = 0.033, Method: Composition-based stats. Identities = 10/83 (12%), Positives = 22/83 (26%), Gaps = 6/83 (7%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDIDQKI 56 + ++ +A A + TV+ N++N +T G + F E + Sbjct: 5 RNIDVAGSALTAHRLWMDTVSSNLANVNTTRTPSGGPYVRKVPIFQEKLMEAMKGAPSSS 64 Query: 57 SFVASGKEYLSKEVGSFISTGTE 79 + Sbjct: 65 GVRVAEIAKDPLPPRMVYQPDHP 87 >gi|119503650|ref|ZP_01625733.1| flagellar hook-associated protein [marine gamma proteobacterium HTCC2080] gi|119460712|gb|EAW41804.1| flagellar hook-associated protein [marine gamma proteobacterium HTCC2080] Length = 556 Score = 49.1 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 34/98 (34%), Gaps = 3/98 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + IG A AL++ +ST N++N +T G+ V S DI Sbjct: 1 MANTLGIGTTALSALQRAISTTGQNIANVNTEGYSRQSVSLSARPAQ---DIGAGYLGSG 57 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98 + + F++ + A G + + Sbjct: 58 VQVTSIDRAYNQFLANDVQQRTASSGYYSLYANAAERV 95 >gi|46578731|ref|YP_009539.1| flagellar basal-body rod protein FlgC [Desulfovibrio vulgaris str. Hildenborough] gi|120603705|ref|YP_968105.1| flagellar basal-body rod protein FlgC [Desulfovibrio vulgaris DP4] gi|46448143|gb|AAS94798.1| flagellar basal-body rod protein FlgC [Desulfovibrio vulgaris str. Hildenborough] gi|120563934|gb|ABM29678.1| flagellar basal-body rod protein FlgC [Desulfovibrio vulgaris DP4] gi|311232603|gb|ADP85457.1| flagellar basal-body rod protein FlgC [Desulfovibrio vulgaris RCH1] Length = 145 Score = 49.1 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 8/44 (18%), Positives = 22/44 (50%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 ++GF+ + N + EM ++ + + + T +D + +A+ Sbjct: 98 QQGFVSYPDINVVEEMANLMTAQRGYEANVTTVDTVKAMYSKAL 141 Score = 39.1 bits (89), Expect = 0.49, Method: Composition-based stats. Identities = 8/31 (25%), Positives = 17/31 (54%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32 T+ +IG +A A ++ ++ N++N T Sbjct: 4 MTALDIGASALTAERTNMNIISMNLANAKTT 34 >gi|325927872|ref|ZP_08189096.1| flagellar basal-body rod protein FlgB [Xanthomonas perforans 91-118] gi|325541712|gb|EGD13230.1| flagellar basal-body rod protein FlgB [Xanthomonas perforans 91-118] Length = 179 Score = 49.1 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 26/55 (47%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65 A EQR+ +A N+SN DT G++ + F + + + + D + K Y Sbjct: 61 ALTLREQRMKLIASNLSNVDTPGYKAKDLNFEAALKSAQGEQDGGLLQTTDAKHY 115 >gi|167465319|ref|ZP_02330408.1| Flagellar basal body protein [Paenibacillus larvae subsp. larvae BRL-230010] Length = 136 Score = 49.1 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 26/80 (32%), Gaps = 7/80 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M+ S A R +A+N++N DT F+ V F E++ + + Sbjct: 12 MERSL-------DASALRQRVIANNVANVDTPQFKRSDVLFEELLQNEITGSVKPLEGYR 64 Query: 61 SGKEYLSKEVGSFISTGTEL 80 + + S Sbjct: 65 TDPRHFKIGQPSLPEGAQIS 84 >gi|238916744|ref|YP_002930261.1| flagellar basal-body rod protein FlgC [Eubacterium eligens ATCC 27750] gi|238872104|gb|ACR71814.1| flagellar basal-body rod protein FlgC [Eubacterium eligens ATCC 27750] Length = 164 Score = 49.1 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 10/32 (31%), Positives = 19/32 (59%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32 M T+FN+ + A + R +++N++N DT Sbjct: 1 MFTAFNVSASGMTAQQLRTDVISENIANADTT 32 Score = 48.3 bits (113), Expect = 9e-04, Method: Composition-based stats. Identities = 8/47 (17%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G++ N N++ EM +I ++ + + + + ++ + + I S Sbjct: 117 GYVTYPNVNTVQEMTDLIDASRSYEANISAFNASKSMATKGLS-IGS 162 >gi|56964843|ref|YP_176574.1| flagellar hook-associated protein 1 FlgK [Bacillus clausii KSM-K16] gi|56911086|dbj|BAD65613.1| flagellar hook-associated protein 1 FlgK [Bacillus clausii KSM-K16] Length = 528 Score = 49.1 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 6/41 (14%), Positives = 16/41 (39%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S + EM +I +N+ + ++ + + I + Sbjct: 484 SGVSLDEEMTLLIQFQHAYNAAARTMTAMDEMLDQIINRLG 524 Score = 39.9 bits (91), Expect = 0.31, Method: Composition-based stats. Identities = 9/50 (18%), Positives = 19/50 (38%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 A + + TV +N++N T G+ +V G + + + Sbjct: 13 AVNTNQTAIQTVGNNVANAKTPGYTRQRVNLQATGGYPATGVWTQPAMNG 62 >gi|302339108|ref|YP_003804314.1| flagellar hook-associated protein FlgK [Spirochaeta smaragdinae DSM 11293] gi|301636293|gb|ADK81720.1| flagellar hook-associated protein FlgK [Spirochaeta smaragdinae DSM 11293] Length = 627 Score = 48.7 bits (114), Expect = 6e-04, Method: Composition-based stats. Identities = 6/40 (15%), Positives = 15/40 (37%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 N E+ MI + + + I ++ + I + + Sbjct: 588 VNLDEELANMIKFQHGYAAASRFITAVDEMLDVIINRMGA 627 >gi|154175384|ref|YP_001408368.1| flagellar hook-associated protein FlgK [Campylobacter curvus 525.92] gi|112802604|gb|EAT99948.1| flagellar hook-associated protein FlgK [Campylobacter curvus 525.92] Length = 623 Score = 48.7 bits (114), Expect = 6e-04, Method: Composition-based stats. Identities = 12/80 (15%), Positives = 31/80 (38%), Gaps = 2/80 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE--VVGAIKNDIDQKISFVAS 61 S N G++ A + ++ST +N++N D+ + +V S + + + Sbjct: 7 SLNTGVSGLNAAQTQISTTGNNIANADSAYYTRQRVVQSASPAMNTVPGGVGTGTQVDTV 66 Query: 62 GKEYLSKEVGSFISTGTELD 81 + + + + L+ Sbjct: 67 KRIHDEFTYSRLKTASSNLE 86 Score = 43.3 bits (100), Expect = 0.028, Method: Composition-based stats. Identities = 13/130 (10%), Positives = 35/130 (26%), Gaps = 7/130 (5%) Query: 110 DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGF 169 D + + A K V + + + G + + I Y Sbjct: 498 QDHTKIRAYSKPVVGNNEVANKMVQLQYTKQTFYSNGTALDRDETIEGYYRYFTTDIASD 557 Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 N+ N + ++ S ++ E+ +I + + +I Sbjct: 558 TEANNTTHDTNTALQKTAEEEFQSI-------SGVDTNEELTNLIRFQASYGAAAKIITT 610 Query: 230 NEKSMLEAIR 239 ++ + + Sbjct: 611 VDQMLDTLLT 620 >gi|296133052|ref|YP_003640299.1| flagellar basal-body rod protein FlgB [Thermincola sp. JR] gi|296031630|gb|ADG82398.1| flagellar basal-body rod protein FlgB [Thermincola potens JR] Length = 138 Score = 48.7 bits (114), Expect = 6e-04, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 23/54 (42%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 A A R +A+NM+N DT G++ + V F E + + + + Sbjct: 17 ALDAASMRNEAIANNMANVDTPGYKRVDVAFEEELKKAMAANGRLQGLTSDPRH 70 >gi|15644116|ref|NP_229165.1| flagellar basal-body rod protein FlgB [Thermotoga maritima MSB8] gi|148270548|ref|YP_001245008.1| flagellar basal-body rod protein FlgB [Thermotoga petrophila RKU-1] gi|4981924|gb|AAD36434.1|AE001790_6 flagellar basal-body rod protein FlgB [Thermotoga maritima MSB8] gi|147736092|gb|ABQ47432.1| flagellar basal-body rod protein FlgB [Thermotoga petrophila RKU-1] Length = 127 Score = 48.7 bits (114), Expect = 6e-04, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 21/50 (42%), Gaps = 1/50 (2%) Query: 1 MQTS-FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK 49 M + F A R + + N++N T G++ V F E++ + Sbjct: 1 MFNTNFYTLKQAMDVALLRQNVHSLNIANVSTPGYKRKYVAFEELLKESE 50 >gi|255263716|ref|ZP_05343058.1| flagellar hook-associated protein FlgK [Thalassiobium sp. R2A62] gi|255106051|gb|EET48725.1| flagellar hook-associated protein FlgK [Thalassiobium sp. R2A62] Length = 479 Score = 48.7 bits (114), Expect = 6e-04, Method: Composition-based stats. Identities = 7/40 (17%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 ++ EM ++ + Q +++ +I ++ M +R + S Sbjct: 441 VDTDQEMQNLLLIEQAYSANAKVIQTVDEMMQTLLR-LGS 479 Score = 44.5 bits (103), Expect = 0.012, Method: Composition-based stats. Identities = 13/89 (14%), Positives = 33/89 (37%), Gaps = 3/89 (3%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 +S + L+ A + V+ N++N+ T G+ ++ ++ + + + Sbjct: 5 SSLSNALSGLTAASRAAEIVSSNLANSLTDGYARRRL---DLSSQLTGGVGGGVQIDGVA 61 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFA 91 + + + L FA A+F Sbjct: 62 RLVDRGVLADRRISDANLGFADTSVAFFR 90 >gi|255654319|ref|ZP_05399728.1| putative flagellar hook-associated protein [Clostridium difficile QCD-23m63] Length = 125 Score = 48.7 bits (114), Expect = 6e-04, Method: Composition-based stats. Identities = 13/77 (16%), Positives = 33/77 (42%), Gaps = 4/77 (5%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE----VVGAIKNDIDQKISF 58 + N + + ++ + T++ N+SN DT G+ + +F+ + ++ N I + Sbjct: 6 SILNTANSGMNSHQKAIQTISHNISNLDTEGYSRQRTEFATNSPMYMPSLSNSIGRGQLG 65 Query: 59 VASGKEYLSKEVGSFIS 75 +++ SF Sbjct: 66 TGVHVTDVTRARNSFYD 82 >gi|297544025|ref|YP_003676327.1| flagellar hook-associated protein FlgK [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296841800|gb|ADH60316.1| flagellar hook-associated protein FlgK [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 480 Score = 48.7 bits (114), Expect = 6e-04, Method: Composition-based stats. Identities = 7/54 (12%), Positives = 16/54 (29%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56 I ++ L N++N +T G+ V + + + Sbjct: 5 QGLEIAKTGLFVSQKALDVTGHNIANANTPGYTRQVVDMVSIAPPTTFGMYDQW 58 Score = 48.3 bits (113), Expect = 8e-04, Method: Composition-based stats. Identities = 6/41 (14%), Positives = 16/41 (39%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S + EM M+ + + + +I ++ + I + Sbjct: 436 SGVSLDEEMTNMLKYQKAYAASARIITAIDELLDTLINKMG 476 >gi|325288776|ref|YP_004264957.1| flagellar basal-body rod protein FlgC [Syntrophobotulus glycolicus DSM 8271] gi|324964177|gb|ADY54956.1| flagellar basal-body rod protein FlgC [Syntrophobotulus glycolicus DSM 8271] Length = 160 Score = 48.7 bits (114), Expect = 6e-04, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 21/42 (50%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N N + EM M+ ++ + + T + ++ +A+ Sbjct: 114 GYVRHPNVNIVQEMIDMLSASRSYEANVTAFNASKAIAAKAL 155 Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 10/53 (18%), Positives = 20/53 (37%), Gaps = 12/53 (22%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV--------G----FRTIKVKFSE 43 + +I + A R+ ++ N++N +T G +R FS Sbjct: 5 SGMDISASGLTAQRLRMDLISSNIANMNTNHTEATTAAGNPIPYRRQMAVFST 57 >gi|269976263|ref|ZP_06183259.1| flagellar basal-body rod protein FlgB [Mobiluncus mulieris 28-1] gi|307699942|ref|ZP_07636993.1| putative flagellar basal-body rod protein FlgB [Mobiluncus mulieris FB024-16] gi|269935592|gb|EEZ92130.1| flagellar basal-body rod protein FlgB [Mobiluncus mulieris 28-1] gi|307614980|gb|EFN94198.1| putative flagellar basal-body rod protein FlgB [Mobiluncus mulieris FB024-16] Length = 115 Score = 48.7 bits (114), Expect = 6e-04, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 31/76 (40%), Gaps = 2/76 (2%) Query: 1 MQTSF-NIGL-AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 M S I + A L R +ADN++N T GF KV+F + + + + + Sbjct: 1 MFDSINYIAMRTALDGLSMRQRVIADNIANIQTPGFLAGKVRFEDELARATRFGNPQSAH 60 Query: 59 VASGKEYLSKEVGSFI 74 +A+ + + Sbjct: 61 IATARSLEPTRIDGNN 76 >gi|260438810|ref|ZP_05792626.1| flagellar basal-body rod protein FlgC [Butyrivibrio crossotus DSM 2876] gi|292808799|gb|EFF68004.1| flagellar basal-body rod protein FlgC [Butyrivibrio crossotus DSM 2876] Length = 145 Score = 48.7 bits (114), Expect = 7e-04, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 21/42 (50%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G+++ N N + EM +I T+ + + T D ++ + + Sbjct: 100 GYVKYPNVNIVNEMTDLIDATRSYEANATAFDASKSMASKGL 141 Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 7/30 (23%), Positives = 14/30 (46%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV 32 + NI + A R ++ N++N +T Sbjct: 5 SGMNIAASGMTAQRLRTDIISGNIANANTT 34 >gi|91792670|ref|YP_562321.1| flagellar hook-associated protein [Shewanella denitrificans OS217] gi|91714672|gb|ABE54598.1| Flagellar hook-associated protein [Shewanella denitrificans OS217] Length = 639 Score = 48.7 bits (114), Expect = 7e-04, Method: Composition-based stats. Identities = 10/79 (12%), Positives = 25/79 (31%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 NI LA + +L ++N++N +T G+ + + S Sbjct: 3 INLLNIARTGVLASQAQLGVTSNNIANANTEGYHRQVAQQGTTDPQMLGGNYYGTGTYVS 62 Query: 62 GKEYLSKEVGSFISTGTEL 80 + + + + + Sbjct: 63 DVKRIYNDYAARELRIGQT 81 Score = 37.2 bits (84), Expect = 1.9, Method: Composition-based stats. Identities = 4/41 (9%), Positives = 14/41 (34%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E ++ Q + + ++ ++ ++ Sbjct: 599 SGVNLDEEAANLLKFQQAYQASARIMTTAQQIFDTLFNSVR 639 >gi|310659650|ref|YP_003937371.1| flagellar hook-associated protein 1 [Clostridium sticklandii DSM 519] gi|308826428|emb|CBH22466.1| flagellar hook-associated protein 1 [Clostridium sticklandii] Length = 518 Score = 48.7 bits (114), Expect = 7e-04, Method: Composition-based stats. Identities = 24/209 (11%), Positives = 52/209 (24%), Gaps = 4/209 (1%) Query: 38 KVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG 97 +++ + + F++ ++ + G L+ A Sbjct: 306 QLQQRDGYKDETKGAPYYVRFLSEFANTFAQALNDIHDDGYSLNGAAASGLPLFTTKNGS 365 Query: 98 IILTRDGRFKVT----DDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK 153 KV DD + +S D I + + + G Sbjct: 366 TNFISASELKVNQALLDDPTKLSLGLGDGAPDNNKNAIAMLNLRSKKDFEIRLTYDTSGA 425 Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQM 213 I D+ + + + V L S + EM M Sbjct: 426 QIVLGEGTPEDVLKTMIASLGVDAQEAKRMFNNQQYLTEEVDSFRLSVSGVSQDEEMSNM 485 Query: 214 IHLTQKFNSITTLIDENEKSMLEAIRNIA 242 I +N+ +I ++ + I + Sbjct: 486 IKFQHAYNAAARMITTVDEMIDVIINRMG 514 Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 19/40 (47%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 +I + A ++ L N+SNT+T G+ ++ S Sbjct: 7 GLSIASSGLFAAQRALDITGHNISNTNTRGYTRQRLNQSA 46 >gi|254292929|ref|YP_003058952.1| flagellar basal-body rod protein FlgC [Hirschia baltica ATCC 49814] gi|254041460|gb|ACT58255.1| flagellar basal-body rod protein FlgC [Hirschia baltica ATCC 49814] Length = 138 Score = 48.7 bits (114), Expect = 7e-04, Method: Composition-based stats. Identities = 8/47 (17%), Positives = 24/47 (51%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G ++ SN +++ EM M + + + +++ + +L A+ + + Sbjct: 92 GMVKYSNVSALVEMTDMREAQRAYEANLNVVEASRSMLLAAVDILKA 138 Score = 43.7 bits (101), Expect = 0.024, Method: Composition-based stats. Identities = 10/82 (12%), Positives = 27/82 (32%), Gaps = 7/82 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQ 54 ++ + + A R+ A+N++N ++ G ++ F + Sbjct: 6 MSAMSSAASGLRAQTVRIRVSAENLANANSTGDTPGADPYQRKVPVFKNYLDRESGAERV 65 Query: 55 KISFVASGKEYLSKEVGSFIST 76 K+S V + + + Sbjct: 66 KVSGVHNDTAPFTVKFDPTHPA 87 >gi|328475671|gb|EGF46420.1| flagellar basal body rod protein FlgB [Listeria monocytogenes 220] Length = 139 Score = 48.7 bits (114), Expect = 7e-04, Method: Composition-based stats. Identities = 10/45 (22%), Positives = 19/45 (42%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56 L+ V++N++N +T F+ + F E G+ Q Sbjct: 12 LNYLQTANQVVSNNIANANTPNFKASEASFEESFGSSLRASGQNS 56 >gi|330808201|ref|YP_004352663.1| flagellar hook-associated protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327376309|gb|AEA67659.1| flagellar hook-associated protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 688 Score = 48.7 bits (114), Expect = 7e-04, Method: Composition-based stats. Identities = 11/39 (28%), Positives = 20/39 (51%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 + NIG++ A + L T +N++N DT G+ + Sbjct: 1 MSLLNIGMSGLSASQTALVTTGNNIANVDTAGYSRQQTV 39 >gi|85712251|ref|ZP_01043302.1| Flagellar basal body protein [Idiomarina baltica OS145] gi|85693878|gb|EAQ31825.1| Flagellar basal body protein [Idiomarina baltica OS145] Length = 134 Score = 48.7 bits (114), Expect = 7e-04, Method: Composition-based stats. Identities = 11/79 (13%), Positives = 23/79 (29%), Gaps = 8/79 (10%) Query: 1 MQTSF----NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56 M L +A+N++N DT G++ + F + + + I Sbjct: 5 MDKLLGIQQYTL--GIRTQRAEL--IANNIANADTPGYKAKGLDFQQALAQAQRGIQSHS 60 Query: 57 SFVASGKEYLSKEVGSFIS 75 K + + Sbjct: 61 LARTHEKHFSVEISPQGQE 79 >gi|197104391|ref|YP_002129768.1| flagellar basal-body rod protein FlgC [Phenylobacterium zucineum HLK1] gi|196477811|gb|ACG77339.1| flagellar basal-body rod protein FlgC [Phenylobacterium zucineum HLK1] Length = 138 Score = 48.7 bits (114), Expect = 7e-04, Method: Composition-based stats. Identities = 14/111 (12%), Positives = 28/111 (25%), Gaps = 12/111 (10%) Query: 1 MQTSFN-----IGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAI 48 M S + I +A A + R+ +A+N++N ++ +R F A Sbjct: 1 MPRSLSGVAQAIAASALRAQQARMRIIAENLANANSTAKVPGGDPYRRQAPVFEPTRVAG 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 + + + S L Sbjct: 61 AAQGVRMSRVEPDQSAFRMEYDPGHPSADDRGYVKLPNVNSLVEAMDMREA 111 Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 7/42 (16%), Positives = 17/42 (40%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G+++ N NS+ E M + + + +I+ + Sbjct: 92 GYVKLPNVNSLVEAMDMREAQRAYEANLNVIETARAMETRTL 133 >gi|319403959|emb|CBI77547.1| Flagellar basal-body rod protein flgC [Bartonella rochalimae ATCC BAA-1498] Length = 138 Score = 48.7 bits (114), Expect = 7e-04, Method: Composition-based stats. Identities = 11/75 (14%), Positives = 26/75 (34%), Gaps = 7/75 (9%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQKISFV 59 I A RL +A+N++N ++ G ++ V F + + ++ + Sbjct: 11 IATTGLSAQSTRLRVIAENLANANSTGKSPGARPYQRKTVSFEATLNPYLDAQGVHVTRI 70 Query: 60 ASGKEYLSKEVGSFI 74 ++ K Sbjct: 71 STDKAPFIMRYEPGH 85 Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 20/42 (47%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G+++ N NS+ EM M + + + +I + + + I Sbjct: 92 GYVKYPNVNSIIEMADMREANRSYEANLQVIRQARDLISQTI 133 >gi|328543166|ref|YP_004303275.1| flagellar basal-body rod protein C [polymorphum gilvum SL003B-26A1] gi|326412912|gb|ADZ69975.1| Flagellar basal-body rod protein C [Polymorphum gilvum SL003B-26A1] Length = 136 Score = 48.7 bits (114), Expect = 7e-04, Method: Composition-based stats. Identities = 13/109 (11%), Positives = 32/109 (29%), Gaps = 10/109 (9%) Query: 1 MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGA-IKN 50 M S I + A R+ +A+N++N D+ G +R F ++ Sbjct: 1 MDLVKSLFISASGLKAQNGRIRVIAENLANADSTGRTPDEDPYRRKIPTFKNRFDRDLQA 60 Query: 51 DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 ++ + E+ ++ + + + Sbjct: 61 ELVELGKLAEDRSEFPTRYEPGHPAADANGNVRVPNVNSLVETVDMREA 109 Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 11/74 (14%), Positives = 24/74 (32%), Gaps = 6/74 (8%) Query: 169 FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228 + + P P D + G + N NS+ E M + + + +I+ Sbjct: 68 LAEDRSEFPTRYEPGHPAADAN------GNVRVPNVNSLVETVDMREAQRSYEANLNVIE 121 Query: 229 ENEKSMLEAIRNIA 242 + + I + Sbjct: 122 STRRMLQRTIDILR 135 >gi|157961177|ref|YP_001501211.1| flagellar hook-associated protein FlgK [Shewanella pealeana ATCC 700345] gi|157846177|gb|ABV86676.1| flagellar hook-associated protein FlgK [Shewanella pealeana ATCC 700345] Length = 640 Score = 48.7 bits (114), Expect = 7e-04, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 22/47 (46%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51 NI LA + +L+ ++N++N +T G+ V S + + Sbjct: 6 MNIARTGVLASQSQLAITSNNIANANTAGYNRQVVSQSALDSQRMGN 52 Score = 36.0 bits (81), Expect = 4.2, Method: Composition-based stats. Identities = 4/41 (9%), Positives = 13/41 (31%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E ++ Q + + ++ + ++ Sbjct: 600 SGVNLDEEAANLMRFQQSYQASARIMTTANEIFNTLFSSLR 640 >gi|254461659|ref|ZP_05075075.1| FlgK flagellar hook-associated protein 1, putative [Rhodobacterales bacterium HTCC2083] gi|206678248|gb|EDZ42735.1| FlgK flagellar hook-associated protein 1, putative [Rhodobacteraceae bacterium HTCC2083] Length = 1431 Score = 48.7 bits (114), Expect = 7e-04, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 23/44 (52%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44 M + +IG +A A + L+ N+ N +T G+R + +EV Sbjct: 1 MASLLDIGRSAVSAQREALNVTGQNIVNANTEGYRRREASLTEV 44 >gi|319406974|emb|CBI80611.1| Flagellar basal-body rod protein flgC [Bartonella sp. 1-1C] Length = 138 Score = 48.7 bits (114), Expect = 7e-04, Method: Composition-based stats. Identities = 11/75 (14%), Positives = 26/75 (34%), Gaps = 7/75 (9%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQKISFV 59 I A RL +A+N++N ++ G ++ V F + + ++ + Sbjct: 11 IATTGLSAQSTRLRVIAENLANANSTGKSPGARPYQRKTVSFEATLNPYIDAQGVHVTRI 70 Query: 60 ASGKEYLSKEVGSFI 74 ++ K Sbjct: 71 STDKAPFIMRYEPGH 85 Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 20/42 (47%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G+++ N NS+ EM M + + + +I + + + I Sbjct: 92 GYVKYPNVNSIIEMADMREANRSYEANLQVIRQARDLISQTI 133 >gi|146277702|ref|YP_001167861.1| flagellar hook-associated protein FlgK [Rhodobacter sphaeroides ATCC 17025] gi|145555943|gb|ABP70556.1| flagellar hook-associated protein FlgK [Rhodobacter sphaeroides ATCC 17025] Length = 1365 Score = 48.7 bits (114), Expect = 7e-04, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 31/79 (39%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + +I + L+ LS A+N++N +T G+ +V ++V G + S Sbjct: 1 MSILDIARSGILSYRSALSVTAENIANVNTEGYVRREVVLAQVPGGQVSPTSAAGSGQGV 60 Query: 62 GKEYLSKEVGSFISTGTEL 80 E + + ++ Sbjct: 61 RVEDVRRAFDGLVAQRLRT 79 >gi|311694358|gb|ADP97231.1| fFlagellar basal-body rod protein FlgB [marine bacterium HP15] Length = 139 Score = 48.7 bits (114), Expect = 7e-04, Method: Composition-based stats. Identities = 15/103 (14%), Positives = 31/103 (30%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 ++ I A A +R +A+N++N DT GF+ + F ++ + + Sbjct: 13 DSALGIHQHAVEARVKRAEVLANNLANADTPGFKARDLDFQAMMQKAQEQVSGFQMAKTH 72 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDG 104 + S + D R+ Sbjct: 73 DAHMDTSPSASESDLMYRVPHQPSVDGNTVDAQQEQTRFMRNA 115 >gi|309779453|ref|ZP_07674214.1| flagellar hook-associated protein FlgK [Ralstonia sp. 5_7_47FAA] gi|308921694|gb|EFP67330.1| flagellar hook-associated protein FlgK [Ralstonia sp. 5_7_47FAA] Length = 645 Score = 48.7 bits (114), Expect = 7e-04, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 27/83 (32%), Gaps = 2/83 (2%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE--VVGAIKNDIDQKISFVA 60 + NIG + + L +N++N T G+ + +E + A + Q + Sbjct: 4 SLLNIGASGLRVADINLQVTGNNIANASTPGYSRQEAVQTENIPLYAGVGYLGQGANVTT 63 Query: 61 SGKEYLSKEVGSFISTGTELDFA 83 + Y S A Sbjct: 64 VKRIYDQFLTAQVQSGQASTSAA 86 >gi|118588700|ref|ZP_01546108.1| flagellar basal-body rod protein C [Stappia aggregata IAM 12614] gi|118438686|gb|EAV45319.1| flagellar basal-body rod protein C [Stappia aggregata IAM 12614] Length = 136 Score = 48.7 bits (114), Expect = 7e-04, Method: Composition-based stats. Identities = 9/47 (19%), Positives = 20/47 (42%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G++ N N++ E M + + + +ID K + I + + Sbjct: 90 GYVLQPNVNTLIETTDMREAQRSYEANLNVIDSTRKMLQRTIDILRA 136 Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 10/59 (16%), Positives = 19/59 (32%), Gaps = 9/59 (15%) Query: 1 MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKN 50 M S I + A R+ +A+N++N ++ +R F Sbjct: 1 MDLIKSLFISASGLRAQNGRMRIIAENIANANSTAKTPEELPYRRKIPTFKSHFDREMG 59 >gi|192360466|ref|YP_001982403.1| flagellar basal-body rod protein FlgB [Cellvibrio japonicus Ueda107] gi|190686631|gb|ACE84309.1| flagellar basal-body rod protein FlgB [Cellvibrio japonicus Ueda107] Length = 133 Score = 48.7 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 23/48 (47%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK 49 + I +A +R S +A+N++N DT ++ V F + +G Sbjct: 6 DKALGIHESALKFRSERASVLANNLANIDTPNYKARDVDFKQALGQQM 53 >gi|226327737|ref|ZP_03803255.1| hypothetical protein PROPEN_01610 [Proteus penneri ATCC 35198] gi|225203441|gb|EEG85795.1| hypothetical protein PROPEN_01610 [Proteus penneri ATCC 35198] Length = 463 Score = 48.7 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 25/53 (47%), Gaps = 1/53 (1%) Query: 1 MQTSF-NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M S N ++ A + +STV++N++N + + F+E G + + Sbjct: 1 MSNSLINTAMSGLNAAQAAMSTVSNNIANQNVKWYNRQMTVFNENSGTMTGNG 53 >gi|313672183|ref|YP_004050294.1| flagellar hook-associated protein flgk [Calditerrivibrio nitroreducens DSM 19672] gi|312938939|gb|ADR18131.1| flagellar hook-associated protein FlgK [Calditerrivibrio nitroreducens DSM 19672] Length = 582 Score = 48.7 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 5/36 (13%), Positives = 13/36 (36%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + E MI + + + I ++ + + I Sbjct: 540 VSMDEEYTNMIKFQKAYEANARFITAVDQMIDKLIN 575 Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 6/35 (17%), Positives = 16/35 (45%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39 + G++ + + N++N +T G+ +V Sbjct: 8 LHTGVSGLYVAQSGIDVTGHNIANLNTEGYSRQRV 42 >gi|296330251|ref|ZP_06872732.1| flagellar hook-associated protein FlgK [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305676144|ref|YP_003867816.1| flagellar hook-filament junction [Bacillus subtilis subsp. spizizenii str. W23] gi|296152519|gb|EFG93387.1| flagellar hook-associated protein FlgK [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305414388|gb|ADM39507.1| flagellar hook-filament junction [Bacillus subtilis subsp. spizizenii str. W23] Length = 507 Score = 48.7 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 7/42 (16%), Positives = 17/42 (40%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S + EM MI +N+ ++ ++ + + I + Sbjct: 462 MSAVSLDEEMTNMIQFQHAYNAAARMVTLQDEILDKVINGMG 503 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 35/92 (38%), Gaps = 2/92 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS--EVVGAIKNDIDQKISFVAS 61 A A + LST A+N++N +T G+ +V + A+ + ++ + + Sbjct: 7 GLETARRALSAQQAALSTTANNVANANTDGYTRQRVSLEATDYFPAVSKNAEKTAGQMGT 66 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALE 93 G + S E I + ++ + Sbjct: 67 GVQGKSVERIRDIFLDYQYRLQNNSAGYYDTK 98 >gi|94969957|ref|YP_592005.1| flagellar hook-associated protein [Candidatus Koribacter versatilis Ellin345] gi|94552007|gb|ABF41931.1| Flagellar hook-associated protein [Candidatus Koribacter versatilis Ellin345] Length = 458 Score = 48.7 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 12/55 (21%), Positives = 23/55 (41%), Gaps = 1/55 (1%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFV 59 +I A LA + + +N++N +T G+ FS V + + + V Sbjct: 8 LSIATRAMLAEQGAMQATTNNIANVNTPGYSRQIPIFSA-VDPVVSGSTTYGNGV 61 Score = 36.8 bits (83), Expect = 2.4, Method: Composition-based stats. Identities = 9/44 (20%), Positives = 18/44 (40%), Gaps = 2/44 (4%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 +RG L S + E ++ + F + L+ ++ M I Sbjct: 411 QRGAL--SGVSLDEETANLLQFQRGFEAAAHLVSVVDEMMQTVI 452 >gi|310641540|ref|YP_003946298.1| flagellar basal-body rod protein flgb [Paenibacillus polymyxa SC2] gi|309246490|gb|ADO56057.1| Flagellar basal-body rod protein FlgB [Paenibacillus polymyxa SC2] Length = 135 Score = 48.7 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 24/58 (41%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLS 67 A A R +ADN+SN DT F+ +V F E++ + + + + Sbjct: 14 AGVQAANTRQRVMADNISNADTPYFKRSEVSFEELLQQQMDGDVTPLRGKVTNSRHFQ 71 >gi|259908814|ref|YP_002649170.1| flagellar basal body rod protein FlgC [Erwinia pyrifoliae Ep1/96] gi|224964436|emb|CAX55945.1| Cell-proximal portion of basal-body rod [Erwinia pyrifoliae Ep1/96] gi|283478796|emb|CAY74712.1| Flagellar basal-body rod protein flgC [Erwinia pyrifoliae DSM 12163] gi|310767288|gb|ADP12238.1| flagellar basal body rod protein FlgC [Erwinia sp. Ejp617] Length = 134 Score = 48.7 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 11/92 (11%), Positives = 33/92 (35%) Query: 148 ISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSM 207 K + + G VR P E + + RG+++ N + + Sbjct: 40 QPYVAKQVVFQTNAAPGSPTGGVRVAEVINDPTPAKLVYEPGNPMADARGYIKMPNVDVV 99 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E + ++ + + +++ ++ M++ + Sbjct: 100 AETVNTLSASRSYQANVEVLNTVKQMMMKTLT 131 Score = 34.8 bits (78), Expect = 9.3, Method: Composition-based stats. Identities = 12/30 (40%), Positives = 18/30 (60%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV 32 F+I +A A QRL+ A N++N D+V Sbjct: 5 RIFDIAGSAMAAQSQRLNVSASNLANADSV 34 >gi|167623367|ref|YP_001673661.1| flagellar hook-associated protein FlgK [Shewanella halifaxensis HAW-EB4] gi|167353389|gb|ABZ76002.1| flagellar hook-associated protein FlgK [Shewanella halifaxensis HAW-EB4] Length = 639 Score = 48.7 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 22/47 (46%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51 NI LA + +L+ ++N++N +T G+ V S + + Sbjct: 6 MNIARTGVLASQSQLAITSNNIANANTAGYNRQVVSQSALDSQRMGN 52 Score = 36.0 bits (81), Expect = 4.4, Method: Composition-based stats. Identities = 4/41 (9%), Positives = 13/41 (31%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E ++ Q + + ++ + ++ Sbjct: 599 SGVNLDEEAANLMRFQQSYQASARIMTTANEIFNTLFSSLR 639 >gi|23092312|gb|AAN08637.1| FlgB [Aeromonas hydrophila] Length = 132 Score = 48.7 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 14/99 (14%), Positives = 34/99 (34%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A +R ++ N++N DT GF+ + FS+ + ++ ++ + L + Sbjct: 15 ALSVRSKRAEVLSSNIANADTPGFKARDINFSQALEEAQHQQGFGLATTSEKHFALQSDA 74 Query: 71 GSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109 L ++ R L ++ + Sbjct: 75 PGLTQYRNPLQPDTGDGNTVDVQQERSEFLRNSLEYQTS 113 >gi|304397202|ref|ZP_07379081.1| flagellar basal-body rod protein FlgC [Pantoea sp. aB] gi|304355351|gb|EFM19719.1| flagellar basal-body rod protein FlgC [Pantoea sp. aB] Length = 134 Score = 48.3 bits (113), Expect = 8e-04, Method: Composition-based stats. Identities = 4/43 (9%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G+++ N + + E + ++ + + +++ + M++ + Sbjct: 89 GYVKMPNVDVVSESVNTMSASRSYQANVEVLNTVKSMMMKTLT 131 Score = 36.4 bits (82), Expect = 3.4, Method: Composition-based stats. Identities = 14/105 (13%), Positives = 26/105 (24%), Gaps = 7/105 (6%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS-EVVGAIKNDIDQ 54 F+I +A A QRL+ A N++N G + +V F + + Sbjct: 4 LNIFDIAGSAMTAQSQRLNVSASNLANADSVTGPDGKPYVAKQVVFQTDAAPGSATGGVK 63 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 V + + + Sbjct: 64 VAKIVDDPTPAKLVYDPGNPMADAKGYVKMPNVDVVSESVNTMSA 108 >gi|148380622|ref|YP_001255163.1| flagellar basal-body rod protein FlgC [Clostridium botulinum A str. ATCC 3502] gi|153931376|ref|YP_001384908.1| flagellar basal body rod protein FlgC [Clostridium botulinum A str. ATCC 19397] gi|153937867|ref|YP_001388377.1| flagellar basal body rod protein FlgC [Clostridium botulinum A str. Hall] gi|148290106|emb|CAL84225.1| flagellar basal-body rod protein [Clostridium botulinum A str. ATCC 3502] gi|152927420|gb|ABS32920.1| flagellar basal-body rod protein FlgC [Clostridium botulinum A str. ATCC 19397] gi|152933781|gb|ABS39280.1| flagellar basal-body rod protein FlgC [Clostridium botulinum A str. Hall] Length = 144 Score = 48.3 bits (113), Expect = 8e-04, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 21/42 (50%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N N + EM M+ + + + T+++ + +A+ Sbjct: 99 GYVSMPNVNVLNEMADMMASVRTYEANVTVMNAEKSMFGKAL 140 Score = 42.5 bits (98), Expect = 0.050, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 20/50 (40%), Gaps = 9/50 (18%) Query: 1 MQTSFNI---GLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKF 41 M +F+ + A R+ T+A N+SN T G ++ F Sbjct: 1 MIKAFDTMRISASGLSAERLRMDTIASNISNATTTRTENGGPYKRKIAVF 50 >gi|321313088|ref|YP_004205375.1| flagellar hook-associated protein FlgK [Bacillus subtilis BSn5] gi|320019362|gb|ADV94348.1| flagellar hook-associated protein FlgK [Bacillus subtilis BSn5] Length = 507 Score = 48.3 bits (113), Expect = 8e-04, Method: Composition-based stats. Identities = 7/42 (16%), Positives = 17/42 (40%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S + EM MI +N+ ++ ++ + + I + Sbjct: 462 MSAVSLDEEMTNMIQFQHAYNAAARMVTLQDELLDKVINGMG 503 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 35/92 (38%), Gaps = 2/92 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS--EVVGAIKNDIDQKISFVAS 61 A A + LST A+N++N +T G+ +V + A+ + ++ + + Sbjct: 7 GLETARRALSAQQAALSTTANNVANANTDGYTRQRVSLEATDYFPAVSKNAEKTAGQMGT 66 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALE 93 G + S E I + ++ + Sbjct: 67 GVQGKSVERIRDIFLDYQYRLQNNSAGYYDTK 98 >gi|289577712|ref|YP_003476339.1| flagellar hook-associated protein FlgK [Thermoanaerobacter italicus Ab9] gi|289527425|gb|ADD01777.1| flagellar hook-associated protein FlgK [Thermoanaerobacter italicus Ab9] Length = 480 Score = 48.3 bits (113), Expect = 8e-04, Method: Composition-based stats. Identities = 7/54 (12%), Positives = 16/54 (29%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56 I ++ L N++N +T G+ V + + + Sbjct: 5 QGLEIAKTGLFVSQKALDVTGHNIANANTPGYTRQVVDMVSIAPPTTFGMYDQW 58 Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 6/41 (14%), Positives = 16/41 (39%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S + EM M+ + + + +I ++ + I + Sbjct: 436 SGVSLDEEMTNMLKYQKSYAASARMITAIDELLDTLINKMG 476 >gi|85058009|ref|YP_453711.1| flagellar basal body rod protein FlgC [Sodalis glossinidius str. 'morsitans'] gi|84778529|dbj|BAE73306.1| flagellar basal-body rod protein FlgC [Sodalis glossinidius str. 'morsitans'] Length = 134 Score = 48.3 bits (113), Expect = 8e-04, Method: Composition-based stats. Identities = 7/42 (16%), Positives = 20/42 (47%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N N + EM + ++ + + +I+ M++ + Sbjct: 89 GYIRMPNVNRVAEMVNTLSASRSYQANVEVINSARSMMMKTL 130 Score = 36.8 bits (83), Expect = 2.9, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 32/94 (34%), Gaps = 8/94 (8%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS--EVVGAIKNDIDQ 54 + F+I +A +A QRL+ A NM+N G +R +V F +G + Sbjct: 5 SIFDISGSALMAQSQRLNVSASNMANADSVTGPDGEPYRAKQVVFQLDAALGQPVGGVRV 64 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEGDA 88 L + G ++ + Sbjct: 65 SQVVEDPAPWRLVYDPGHPLANDRGYIRMPNVNR 98 >gi|168180911|ref|ZP_02615575.1| flagellar basal-body rod protein FlgC [Clostridium botulinum NCTC 2916] gi|182668190|gb|EDT80169.1| flagellar basal-body rod protein FlgC [Clostridium botulinum NCTC 2916] Length = 144 Score = 48.3 bits (113), Expect = 8e-04, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 21/42 (50%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N N + EM M+ + + + T+++ + +A+ Sbjct: 99 GYVSMPNVNVLNEMADMMASVRTYEANVTVMNAEKSMFGKAL 140 Score = 44.5 bits (103), Expect = 0.012, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 20/50 (40%), Gaps = 9/50 (18%) Query: 1 MQTSFNI---GLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKF 41 M +F+ + A R+ T+A N++N T G ++ F Sbjct: 1 MIKAFDTMRISASGLSAERLRMDTIASNIANATTTRTENGGPYKRKIAVF 50 >gi|291486094|dbj|BAI87169.1| flagellar hook-associated protein FlgK [Bacillus subtilis subsp. natto BEST195] Length = 507 Score = 48.3 bits (113), Expect = 8e-04, Method: Composition-based stats. Identities = 7/42 (16%), Positives = 17/42 (40%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S + EM MI +N+ ++ ++ + + I + Sbjct: 462 MSAVSLDEEMTNMIQFQHAYNAAARMVTLQDELLDKVINGMG 503 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 35/92 (38%), Gaps = 2/92 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS--EVVGAIKNDIDQKISFVAS 61 A A + LST A+N++N +T G+ +V + A+ + ++ + + Sbjct: 7 GLETARRALSAQQAALSTTANNVANANTDGYTRQRVSLEATDYFPAVSKNAEKTAGQMGT 66 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALE 93 G + S E I + ++ + Sbjct: 67 GVQGKSVERIRDIFLDYQYRLQNNSAGYYDTK 98 >gi|227871683|ref|ZP_03990096.1| flagellar hook-associated protein FlgK [Oribacterium sinus F0268] gi|227842482|gb|EEJ52699.1| flagellar hook-associated protein FlgK [Oribacterium sinus F0268] Length = 594 Score = 48.3 bits (113), Expect = 8e-04, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 31/80 (38%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 + F+ L+A +++L V N++N +T G+ ++K S + + V G Sbjct: 7 SGFDTALSALRMNQKKLDVVGHNLANMNTEGYTRQELKTSSINYENPTSFYMNSNDVNVG 66 Query: 63 KEYLSKEVGSFISTGTELDF 82 EV + + Sbjct: 67 FGVAMDEVRQLRDQFLDGQY 86 >gi|224370789|ref|YP_002604953.1| FlgC [Desulfobacterium autotrophicum HRM2] gi|223693506|gb|ACN16789.1| FlgC [Desulfobacterium autotrophicum HRM2] Length = 165 Score = 48.3 bits (113), Expect = 8e-04, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 22/51 (43%), Gaps = 8/51 (15%) Query: 1 MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43 M S I A +++ +A+N++N DT G +R V F + Sbjct: 1 MDLLDSMKISATGLAAHRTKMNVIAENLANVDTTRTADGGPYRRKMVVFKD 51 Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 9/46 (19%), Positives = 22/46 (47%), Gaps = 1/46 (2%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G++ N + + E+ MI + + + T I + +L+A+ + Sbjct: 120 GYVAMPNVDHLTEVADMIVAKRSYEASITAISNTKSMILKAL-ELG 164 >gi|150019110|ref|YP_001311364.1| flagellar hook-associated protein FlgK [Clostridium beijerinckii NCIMB 8052] gi|149905575|gb|ABR36408.1| flagellar hook-associated protein FlgK [Clostridium beijerinckii NCIMB 8052] Length = 583 Score = 48.3 bits (113), Expect = 8e-04, Method: Composition-based stats. Identities = 6/43 (13%), Positives = 16/43 (37%) Query: 199 LEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 L +S + E +I + + +I ++ + I + Sbjct: 539 LSESGVSIDEETTNLIQFQHAYQANAKVISTVDELLDVVINGL 581 Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 7/34 (20%), Positives = 14/34 (41%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 I + ++T + N+SN T G+ + Sbjct: 10 IAKRGLNVQQGNINTTSHNISNASTTGYSRQRAV 43 >gi|16080594|ref|NP_391421.1| flagellar hook-associated protein FlgK [Bacillus subtilis subsp. subtilis str. 168] gi|221311492|ref|ZP_03593339.1| flagellar hook-associated protein FlgK [Bacillus subtilis subsp. subtilis str. 168] gi|221315819|ref|ZP_03597624.1| flagellar hook-associated protein FlgK [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320734|ref|ZP_03602028.1| flagellar hook-associated protein FlgK [Bacillus subtilis subsp. subtilis str. JH642] gi|221325019|ref|ZP_03606313.1| flagellar hook-associated protein FlgK [Bacillus subtilis subsp. subtilis str. SMY] gi|2828498|sp|P39810|FLGK_BACSU RecName: Full=Flagellar hook-associated protein 1; Short=HAP1 gi|1762338|gb|AAC44946.1| flagellar-hook associated protein 1 (HAP1) [Bacillus subtilis subsp. subtilis str. 168] gi|2636067|emb|CAB15558.1| flagellar hook-filament junction [Bacillus subtilis subsp. subtilis str. 168] Length = 507 Score = 48.3 bits (113), Expect = 8e-04, Method: Composition-based stats. Identities = 7/42 (16%), Positives = 17/42 (40%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S + EM MI +N+ ++ ++ + + I + Sbjct: 462 MSAVSLDEEMTNMIQFQHAYNAAARMVTLQDELLDKVINGMG 503 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 35/92 (38%), Gaps = 2/92 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS--EVVGAIKNDIDQKISFVAS 61 A A + LST A+N++N +T G+ +V + A+ + ++ + + Sbjct: 7 GLETARRALSAQQAALSTTANNVANANTDGYTRQRVSLEATDYFPAVSKNAEKTAGQMGT 66 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALE 93 G + S E I + ++ + Sbjct: 67 GVQGKSVERIRDIFLDYQYRLQNNSAGYYDTK 98 >gi|90418393|ref|ZP_01226305.1| flagellar basal-body rod protein flgC [Aurantimonas manganoxydans SI85-9A1] gi|90338065|gb|EAS51716.1| flagellar basal-body rod protein flgC [Aurantimonas manganoxydans SI85-9A1] Length = 138 Score = 48.3 bits (113), Expect = 8e-04, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 22/56 (39%), Gaps = 7/56 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKN 50 +S I + A R+ V++N++N T G ++ V F + + Sbjct: 6 LSSLKIAASGLQAQSTRMRIVSENIANAQTTGTTPGSDPYQRKMVSFQSELDRVSG 61 Score = 43.7 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 11/124 (8%), Positives = 33/124 (26%) Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 + + G + K+++ V + G Sbjct: 15 GLQAQSTRMRIVSENIANAQTTGTTPGSDPYQRKMVSFQSELDRVSGAQMVSVDKVGRDD 74 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + + G+++ N + EM M + + + ++ + + + I Sbjct: 75 TPFILESDPGNPAANADGYVKMPNVRMLVEMADMREANRSYEANIQVVKQAREIINMTID 134 Query: 240 NIAS 243 + S Sbjct: 135 LLRS 138 >gi|260892170|ref|YP_003238267.1| flagellar hook-associated protein FlgK [Ammonifex degensii KC4] gi|260864311|gb|ACX51417.1| flagellar hook-associated protein FlgK [Ammonifex degensii KC4] Length = 570 Score = 48.3 bits (113), Expect = 9e-04, Method: Composition-based stats. Identities = 12/86 (13%), Positives = 29/86 (33%), Gaps = 9/86 (10%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE---------VVGAIKNDIDQ 54 L A +A+++ + T A N++N T G+ +V+ + + A + Sbjct: 7 GLETTLRALMAMQRSMETAAHNIANASTPGYSRQRVELAASSAYTIPSVLRPAAPGQLGT 66 Query: 55 KISFVASGKEYLSKEVGSFISTGTEL 80 + + + + L Sbjct: 67 GVDITGIKRVREEFLDRQWREENSRL 92 >gi|92116887|ref|YP_576616.1| flagellar hook-associated protein [Nitrobacter hamburgensis X14] gi|91799781|gb|ABE62156.1| Flagellar hook-associated protein [Nitrobacter hamburgensis X14] Length = 619 Score = 48.3 bits (113), Expect = 9e-04, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 35/79 (44%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 ++ +I ++ A + LS V+ N++N +T G+ + ++V + I + Sbjct: 5 SALSIAMSGLRANQAALSIVSGNVANANTPGYVAQTLVQDQIVTGSTGSGVRVIGVNRTL 64 Query: 63 KEYLSKEVGSFISTGTELD 81 Y+ ++ + + G D Sbjct: 65 DTYVQSQLRTENAGGAYAD 83 Score = 39.1 bits (89), Expect = 0.50, Method: Composition-based stats. Identities = 15/119 (12%), Positives = 33/119 (27%) Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 + + G A Q FV ++S + Sbjct: 498 PVTPAGDTTRSDFIFDQLTSATYTYSPNTGLGAAAAPFKGTLPSFLQQFVSVQSSAATTA 557 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +D+ T++ F + N EM +I L + + ++ + M ++ Sbjct: 558 KQVAQGQDVVVNTLQEKFNAKAGVNIDTEMTNLIALQNSYAANAHVMSVVQSMMQTLLQ 616 >gi|322382306|ref|ZP_08056213.1| flagellar basal body rod protein FlgB-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153659|gb|EFX46034.1| flagellar basal body rod protein FlgB-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 137 Score = 48.3 bits (113), Expect = 9e-04, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 26/80 (32%), Gaps = 7/80 (8%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M+ S A R +A+N++N DT F+ V F E++ + + Sbjct: 13 MERSL-------DASALRQRVIANNVANVDTPQFKRSDVLFEELLQNEITGSVKPLEGYR 65 Query: 61 SGKEYLSKEVGSFISTGTEL 80 + + S Sbjct: 66 TDPRHFKIGQPSLPEGAQIS 85 >gi|304390261|ref|ZP_07372215.1| flagellar hook-associated protein FlgK [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304326743|gb|EFL93987.1| flagellar hook-associated protein FlgK [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 687 Score = 48.3 bits (113), Expect = 9e-04, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44 +S N GL A ++ + N++N +T G+ +V+ + Sbjct: 6 SSLNAGLTGLYAAQRLIEVSGQNINNMNTPGYTRQRVEQRAL 47 Score = 41.0 bits (94), Expect = 0.16, Method: Composition-based stats. Identities = 4/39 (10%), Positives = 12/39 (30%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S+ + E+ +I + ++ + I Sbjct: 646 QSSVDMNEEVINLIQGQHAYAGAARIMSTVNSMLEALIN 684 >gi|298345981|ref|YP_003718668.1| flagellar hook-associated protein FlgK [Mobiluncus curtisii ATCC 43063] gi|298236042|gb|ADI67174.1| flagellar hook-associated protein FlgK [Mobiluncus curtisii ATCC 43063] Length = 687 Score = 48.3 bits (113), Expect = 9e-04, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44 +S N GL A ++ + N++N +T G+ +V+ + Sbjct: 6 SSLNAGLTGLYAAQRLIEVSGQNINNMNTPGYTRQRVEQRAL 47 Score = 41.0 bits (94), Expect = 0.16, Method: Composition-based stats. Identities = 4/39 (10%), Positives = 12/39 (30%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S+ + E+ +I + ++ + I Sbjct: 646 QSSVDMNEEVINLIQGQHAYAGAARIMSTVNSMLEALIN 684 >gi|153938711|ref|YP_001391964.1| flagellar basal body rod protein FlgC [Clostridium botulinum F str. Langeland] gi|152934607|gb|ABS40105.1| flagellar basal-body rod protein FlgC [Clostridium botulinum F str. Langeland] gi|295319981|gb|ADG00359.1| flagellar basal-body rod protein FlgC [Clostridium botulinum F str. 230613] Length = 144 Score = 48.3 bits (113), Expect = 9e-04, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 21/42 (50%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N N + EM M+ + + + T+++ + +A+ Sbjct: 99 GYVSMPNVNVLNEMADMMASVRTYEANVTVMNAEKSMFGKAL 140 Score = 42.2 bits (97), Expect = 0.059, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 20/50 (40%), Gaps = 9/50 (18%) Query: 1 MQTSFNI---GLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKF 41 M +F+ + A R+ T+A N+SN T G ++ F Sbjct: 1 MIKAFDTMRISASGLSAERLRMDTIASNISNATTTRTENGGPYKRKIAVF 50 >gi|149201615|ref|ZP_01878589.1| FlgK flagellar hook-associated protein 1 [Roseovarius sp. TM1035] gi|149144663|gb|EDM32692.1| FlgK flagellar hook-associated protein 1 [Roseovarius sp. TM1035] Length = 1335 Score = 48.3 bits (113), Expect = 9e-04, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 18/43 (41%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 M +IG LA L +N++N DT G+R E Sbjct: 1 MVDLMDIGRGGVLAYRTALGVTGENIANVDTAGYRRRDAVMQE 43 >gi|331005437|ref|ZP_08328816.1| flagellar basal body protein [gamma proteobacterium IMCC1989] gi|330420713|gb|EGG95000.1| flagellar basal body protein [gamma proteobacterium IMCC1989] Length = 130 Score = 48.3 bits (113), Expect = 9e-04, Method: Composition-based stats. Identities = 10/49 (20%), Positives = 19/49 (38%) Query: 9 LAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS 57 + A L R ++ N++N T G+ V F + + + D Sbjct: 14 MTALDGLLLRHQVISHNIANVSTPGYSAKTVSFEQFLTNMSMDATSPSQ 62 >gi|153954739|ref|YP_001395504.1| hypothetical protein CKL_2121 [Clostridium kluyveri DSM 555] gi|219855203|ref|YP_002472325.1| hypothetical protein CKR_1860 [Clostridium kluyveri NBRC 12016] gi|146347597|gb|EDK34133.1| FlgK [Clostridium kluyveri DSM 555] gi|219568927|dbj|BAH06911.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 632 Score = 48.3 bits (113), Expect = 9e-04, Method: Composition-based stats. Identities = 8/75 (10%), Positives = 20/75 (26%) Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 V + E + + S + EM +I + + + Sbjct: 556 NNLVNKVGMHEEEAKKQVDYEATQLESFTQSRESTSGVSLDEEMTNLIQFQHCYQANAKM 615 Query: 227 IDENEKSMLEAIRNI 241 I ++ + I + Sbjct: 616 ISTVDELLDVVINGL 630 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 7/38 (18%), Positives = 18/38 (47%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 + FN + A + ++ + N++N +T G+ + Sbjct: 6 SIFNTAKSGLFAQQTSINVTSHNIANAETEGYSRQRAT 43 >gi|302669846|ref|YP_003829806.1| flagellar hook-associated protein FlgK1 [Butyrivibrio proteoclasticus B316] gi|302394319|gb|ADL33224.1| flagellar hook-associated protein FlgK1 [Butyrivibrio proteoclasticus B316] Length = 557 Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 21/65 (32%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 +G + + L+T A NM+N DT G+ +V I+ G Sbjct: 7 LYVGQSGLQTSQNALNTTAHNMANVDTEGYTRQQVSQGTRAYQTLERRYDTIAPKQIGTG 66 Query: 65 YLSKE 69 Sbjct: 67 VNYNH 71 >gi|289670516|ref|ZP_06491591.1| flagellar hook-associated protein FlgK [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 229 Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 27/42 (64%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 + + G +A +A ++ LSTV+ N++N +T G+ +V+F+ Sbjct: 1 MSIMSTGTSALIAFQRALSTVSHNVANINTEGYSRQRVEFAT 42 >gi|238919265|ref|YP_002932780.1| flagellar hook-associated protein FlgK, [Edwardsiella ictaluri 93-146] gi|238868834|gb|ACR68545.1| flagellar hook-associated protein FlgK, putative [Edwardsiella ictaluri 93-146] Length = 550 Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 19/43 (44%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 M N ++ A + L ++N++N T G+ V +E Sbjct: 1 MANLINNAMSGLSAAQTALGVTSNNINNVYTAGYNRQTVTLAE 43 >gi|116326933|ref|YP_796653.1| flagellar hook-associated protein FlgK [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116332402|ref|YP_802120.1| flagellar hook-associated protein FlgK [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116119677|gb|ABJ77720.1| Endoflagellar hook junction protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116126091|gb|ABJ77362.1| Endoflagellar hook junction protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 636 Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 7/39 (17%), Positives = 15/39 (38%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 N EM M+ +N+ +I+ + + I + Sbjct: 597 VNLDEEMANMVQFQHSYNASAKMINTINEILDTIINRLG 635 Score = 36.0 bits (81), Expect = 5.0, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 31/99 (31%), Gaps = 9/99 (9%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV---------VGAIKNDID 53 + IG A +Q L T N+SN D + +V + + + I Sbjct: 6 SGLEIGKRGLTAHQQALQTTGHNISNADNKHYARQRVTMTAMDPLYDPSLNRANLPGQIG 65 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL 92 Q + + + + I T D+ + + Sbjct: 66 QGVEIASIERIRDNFIDDRIIETSGNKDYWAARNEYLYQ 104 >gi|212634354|ref|YP_002310879.1| flagellar basal body rod protein [Shewanella piezotolerans WP3] gi|212555838|gb|ACJ28292.1| Flagellar basal body rod protein [Shewanella piezotolerans WP3] Length = 640 Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 10/51 (19%), Positives = 22/51 (43%), Gaps = 1/51 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51 M +I LA + +L+ ++N++N +T G+ S + + Sbjct: 3 MD-LLSIARTGVLASQSQLAITSNNIANANTDGYNRQVASQSALDSQRMGN 52 Score = 35.2 bits (79), Expect = 7.9, Method: Composition-based stats. Identities = 4/41 (9%), Positives = 13/41 (31%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E ++ Q + + ++ + ++ Sbjct: 600 SGVNLDEEAANLMRFQQSYQASARIMTTATEIFNTLFSSLR 640 >gi|89902483|ref|YP_524954.1| flagellar hook-associated protein [Rhodoferax ferrireducens T118] gi|89347220|gb|ABD71423.1| Flagellar hook-associated protein [Rhodoferax ferrireducens T118] Length = 644 Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 11/52 (21%), Positives = 19/52 (36%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M ++G A A + L T +N++N +T G+ G Sbjct: 1 MSGLLSVGTRALQANQVMLQTAGNNIANVNTPGYSRQSAVLQTSTGQFTGGG 52 Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 5/41 (12%), Positives = 15/41 (36%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E +++ Q + + ++ + I+ + Sbjct: 604 SGVNLDEEAAKLLQYQQAYQASAKMMQIAQGIFDTLIQTLR 644 >gi|315657526|ref|ZP_07910408.1| flagellar hook-associated protein FlgK [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315491998|gb|EFU81607.1| flagellar hook-associated protein FlgK [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 688 Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44 +S N GL A ++ + N++N +T G+ +V+ + Sbjct: 6 SSLNAGLTGLYAAQRLIEVSGQNINNMNTPGYTRQRVEQRAL 47 Score = 41.0 bits (94), Expect = 0.16, Method: Composition-based stats. Identities = 4/39 (10%), Positives = 12/39 (30%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S+ + E+ +I + ++ + I Sbjct: 647 QSSVDMNEEVINLIQGQHAYAGAARIMSTVNSMLEALIN 685 >gi|302037635|ref|YP_003797957.1| first flagellar hook-filament junction protein FlgK [Candidatus Nitrospira defluvii] gi|300605699|emb|CBK42032.1| First flagellar hook-filament junction protein FlgK [Candidatus Nitrospira defluvii] Length = 464 Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 6/40 (15%), Positives = 18/40 (45%) Query: 200 EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E S + E+ ++ + F + + LI +++ + + Sbjct: 422 EVSGVSMDEELINLLKYQRAFEAASKLITTSDEMLQTILT 461 Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 24/65 (36%), Gaps = 2/65 (3%) Query: 2 QTSFN-IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 IG A ++ LS N++N T G+ ++ SE + Q + V Sbjct: 4 LNGLFGIGSNALATFQRALSVTGQNIANVSTPGYSRQEITLSESL-PENGQPGQIGTGVT 62 Query: 61 SGKEY 65 + + Sbjct: 63 ATEIR 67 >gi|222053739|ref|YP_002536101.1| flagellar hook-associated protein FlgK [Geobacter sp. FRC-32] gi|221563028|gb|ACM19000.1| flagellar hook-associated protein FlgK [Geobacter sp. FRC-32] Length = 479 Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 32/93 (34%), Gaps = 2/93 (2%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--IDQKISFVASG 62 F+I A Q + ++N++N +T G+ +V I + I + VA Sbjct: 7 FSIATRGIAAQRQAIEVTSENIANVNTPGYSRQRVIMESGPANIASGFPIGGGVEVVAVQ 66 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESP 95 + Y + ++ + L P Sbjct: 67 RSYDNLLQTQLVNGNSTYQQNLAKQTALQQVEP 99 Score = 40.6 bits (93), Expect = 0.19, Method: Composition-based stats. Identities = 7/44 (15%), Positives = 16/44 (36%), Gaps = 2/44 (4%) Query: 197 GFLEDSN--ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 L +SN + E+ ++ + F L+ + M + Sbjct: 432 NTLRESNAGVSLDEELTNLLKYQRAFEGAARLVTTGSEMMDTIL 475 >gi|56460254|ref|YP_155535.1| flagellar basal body rod protein [Idiomarina loihiensis L2TR] gi|56179264|gb|AAV81986.1| Flagellar basal body rod protein [Idiomarina loihiensis L2TR] Length = 150 Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 20/44 (45%) Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N+M EM MI ++ + + + D + +R Sbjct: 103 SGYIYRPNVNTMEEMANMISASRSYQTNVQVADTAKTMTQRLLR 146 >gi|121596124|ref|YP_988020.1| flagellar hook-associated protein FlgK [Acidovorax sp. JS42] gi|120608204|gb|ABM43944.1| flagellar hook-associated protein FlgK [Acidovorax sp. JS42] Length = 691 Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 20/51 (39%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 + N+G A LA + L T N++N T G+ V V G Sbjct: 1 MSLLNVGARALLANQVALQTTGHNIANVSTAGYSRQNVGMETVQGQFTGSG 51 Score = 42.2 bits (97), Expect = 0.068, Method: Composition-based stats. Identities = 6/41 (14%), Positives = 15/41 (36%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E ++I Q + + ++ + I+ + Sbjct: 650 SGVNLDEEAARLIQYQQAYQASAKMLQIAQNIFDNLIQTMG 690 >gi|74101656|gb|AAZ99746.1| FlgCL [Aeromonas hydrophila] Length = 141 Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 22/45 (48%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + GF+ SN N++ EM M+ ++ F + +I+ +R Sbjct: 92 QDGFVYYSNVNAVEEMADMMSASRGFETSVEVINRINSMQQGLLR 136 Score = 41.0 bits (94), Expect = 0.15, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 6/55 (10%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDT------VGFRTIKVKFSEVVGAIKN 50 ++I +A A RL TVA N++N D+ FR IK FS + +++ Sbjct: 4 NRIYDIAGSAMRAQTVRLDTVASNLANVDSAAGSEEAAFRAIKPVFSTLYQRVQD 58 >gi|308186391|ref|YP_003930522.1| Flagellar basal-body rod protein flgC [Pantoea vagans C9-1] gi|308056901|gb|ADO09073.1| Flagellar basal-body rod protein flgC [Pantoea vagans C9-1] Length = 134 Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 4/43 (9%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G+++ N + + E + ++ + + +++ + M++ + Sbjct: 89 GYVKMPNVDVVSESVNTMSASRSYQANVEVLNTVKSMMMKTLT 131 Score = 36.4 bits (82), Expect = 3.3, Method: Composition-based stats. Identities = 14/105 (13%), Positives = 26/105 (24%), Gaps = 7/105 (6%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFS-EVVGAIKNDIDQ 54 F+I +A A QRL+ A N++N G + +V F + + Sbjct: 4 LNIFDIAGSAMTAQSQRLNVSASNLANADSVTGPDGKPYVAKQVVFQTDAAPGSATGGVK 63 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 V + + + Sbjct: 64 VARVVDDPTPAKLVYDPGNPMADAKGYVKMPNVDVVSESVNTMSA 108 >gi|207093458|ref|ZP_03241245.1| flagellar basal body rod protein FlgC [Helicobacter pylori HPKX_438_AG0C1] Length = 72 Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 8/44 (18%), Positives = 19/44 (43%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 +G++ N N++ EM ++ T+ + + + AI Sbjct: 24 AQGYVAYPNVNAVVEMADLVEATRAYQANVAAFQSAKNMAQNAI 67 >gi|168183267|ref|ZP_02617931.1| flagellar basal-body rod protein FlgC [Clostridium botulinum Bf] gi|170756841|ref|YP_001782281.1| flagellar basal body rod protein FlgC [Clostridium botulinum B1 str. Okra] gi|226950077|ref|YP_002805168.1| flagellar basal body rod protein FlgC [Clostridium botulinum A2 str. Kyoto] gi|237796104|ref|YP_002863656.1| flagellar basal body rod protein FlgC [Clostridium botulinum Ba4 str. 657] gi|169122053|gb|ACA45889.1| flagellar basal-body rod protein FlgC [Clostridium botulinum B1 str. Okra] gi|182673715|gb|EDT85676.1| flagellar basal-body rod protein FlgC [Clostridium botulinum Bf] gi|226841648|gb|ACO84314.1| flagellar basal-body rod protein FlgC [Clostridium botulinum A2 str. Kyoto] gi|229263476|gb|ACQ54509.1| flagellar basal-body rod protein FlgC [Clostridium botulinum Ba4 str. 657] Length = 144 Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 21/42 (50%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N N + EM M+ + + + T+++ + +A+ Sbjct: 99 GYVSMPNVNVLNEMADMMASVRTYEANVTVMNAEKSMFGKAL 140 Score = 42.2 bits (97), Expect = 0.063, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 20/50 (40%), Gaps = 9/50 (18%) Query: 1 MQTSFNI---GLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKF 41 M +F+ + A R+ T+A N+SN T G ++ F Sbjct: 1 MIKAFDTMRISASGLSAERLRMDTIASNISNATTTRTENGGPYKRKIAVF 50 >gi|73539447|ref|YP_299814.1| flagellar basal body rod protein FlgB [Ralstonia eutropha JMP134] gi|72122784|gb|AAZ64970.1| Flagellar basal-body rod protein FlgB [Ralstonia eutropha JMP134] Length = 135 Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 15/89 (16%), Positives = 28/89 (31%), Gaps = 4/89 (4%) Query: 1 MQTSFNIGL----AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56 M + L A QR S +A N+++ DT G++ FS + + Sbjct: 1 MIDRLDSALRFQQEALSLRTQRQSVIASNIAHADTPGYKARDFDFSSTLAQTMERGRRPD 60 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALE 85 S + +L + + Sbjct: 61 GVSLSTTSVRHLPAQAPTRDDADLAYRIP 89 >gi|319764545|ref|YP_004128482.1| flagellar hook-associated protein flgk [Alicycliphilus denitrificans BC] gi|317119106|gb|ADV01595.1| flagellar hook-associated protein FlgK [Alicycliphilus denitrificans BC] Length = 660 Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 20/51 (39%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 + N+G A LA + L T N++N T G+ V V G Sbjct: 1 MSLLNVGARALLANQVALQTTGHNIANVSTAGYSRQSVAMQTVQGQFTGSG 51 Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 19/150 (12%), Positives = 41/150 (27%), Gaps = 9/150 (6%) Query: 98 IILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157 T ++ G ++ G D +V + + G S ++ Sbjct: 514 QSYTPGQPIQID--GWSITLQGTPQDGDTVTVGNALDPQYGDGYTRNAGNASALMRLRDV 571 Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDS-----NANSMYEMGQ 212 +S G+ + LS LE S N E + Sbjct: 572 KMFDESTLSDGYAGLMAQVGTRTQSAQYAAKLSDS--IASNLEASRTAVSGVNLDEEAAR 629 Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 +I Q + + ++ + I+++ Sbjct: 630 LIQYQQAYQASAKMLQIAQNIFDNLIQSMG 659 >gi|258512522|ref|YP_003185956.1| flagellar hook-associated protein FlgK [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257479248|gb|ACV59567.1| flagellar hook-associated protein FlgK [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 481 Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 13/39 (33%), Positives = 22/39 (56%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 IGL+ A+++ S V +N+ N +T G+ V F+E Sbjct: 9 LYIGLSGLQAMQEAESVVGNNIDNANTPGYAQETVNFAE 47 >gi|145297453|ref|YP_001140294.1| flagellar basal body rod protein FlgC [Aeromonas salmonicida subsp. salmonicida A449] gi|142850225|gb|ABO88546.1| lateral flagellar basal body rod protein, LfgC [Aeromonas salmonicida subsp. salmonicida A449] Length = 141 Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 22/45 (48%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + GF+ SN N++ EM M+ ++ F + +I+ +R Sbjct: 92 QDGFVYYSNVNAVEEMADMMSASRGFETSVEVINRINSMQQGLLR 136 Score = 41.0 bits (94), Expect = 0.16, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 6/55 (10%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDT------VGFRTIKVKFSEVVGAIKN 50 ++I +A A RL TVA N++N D+ FR IK FS + +++ Sbjct: 4 NRIYDIAGSAMRAQTVRLDTVASNLANVDSAAGSEDAAFRAIKPVFSTLYQRVQD 58 >gi|320354350|ref|YP_004195689.1| flagellar hook-associated protein FlgK [Desulfobulbus propionicus DSM 2032] gi|320122852|gb|ADW18398.1| flagellar hook-associated protein FlgK [Desulfobulbus propionicus DSM 2032] Length = 465 Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 9/51 (17%), Positives = 23/51 (45%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 + N G + L ++ + V +N++N +T G+ + + ++ D Sbjct: 5 LNALNAGKTSLLTNQKSIEIVGNNIANVNTEGYSRQRAELMQIPAVNFGDF 55 Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 8/60 (13%), Positives = 21/60 (35%), Gaps = 3/60 (5%) Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + + ++ G+ S + EM +I + F S + ++ M ++ Sbjct: 406 ALQGAQDAAVQLQNLRDGY---SGVSLEEEMIDLIQYQRGFESSAKFLATVDEMMNALLQ 462 >gi|152980141|ref|YP_001353117.1| flagellar hook-associated protein FlgK [Janthinobacterium sp. Marseille] gi|151280218|gb|ABR88628.1| FlgK flagellar hook-associated protein [Janthinobacterium sp. Marseille] Length = 647 Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 21/70 (30%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M +I + A + ++T N++N T G+ V S + G + Sbjct: 1 MSNLLSIAKSGLAAAQAGVATTGHNIANEKTPGYSRQLVIQSSLGGQNLTGGGYIGNGTN 60 Query: 61 SGKEYLSKEV 70 Sbjct: 61 VDSVKRIFND 70 Score = 40.6 bits (93), Expect = 0.18, Method: Composition-based stats. Identities = 21/150 (14%), Positives = 44/150 (29%), Gaps = 1/150 (0%) Query: 90 FALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEIS 149 P G +T ++ G+ + SG D ++ + N+ GE+ Sbjct: 496 VPTTFPAGTPVTYTAGSVISFGGAEIKISGAPANGDKFTISANTNGDGDNRNMLALGELQ 555 Query: 150 QKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYE 209 K + Y+ SQ V + + E ++ +S N E Sbjct: 556 TKNVLQGGTASYNSAYSQ-LVSLVGNKTRELQTNSASEGALLKQMQTAQQSESGVNLDEE 614 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 ++ Q + + ++ I Sbjct: 615 ATNLLRYQQAYQASGKVMQAVSDMFDVLIS 644 >gi|330826761|ref|YP_004390064.1| flagellar hook-associated protein FlgK [Alicycliphilus denitrificans K601] gi|329312133|gb|AEB86548.1| flagellar hook-associated protein FlgK [Alicycliphilus denitrificans K601] Length = 660 Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 20/51 (39%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 + N+G A LA + L T N++N T G+ V V G Sbjct: 1 MSLLNVGARALLANQVALQTTGHNIANVSTAGYSRQSVAMQTVQGQFTGSG 51 Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 19/150 (12%), Positives = 41/150 (27%), Gaps = 9/150 (6%) Query: 98 IILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157 T ++ G ++ G D +V + + G S ++ Sbjct: 514 QSYTPGQPIQID--GWSITLQGTPQDGDTVTVGNALDPQYGDGYTRNAGNASALMRLRDV 571 Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDS-----NANSMYEMGQ 212 +S G+ + LS LE S N E + Sbjct: 572 KMFDESTLSDGYAGLMAQVGTRTQSAQYAAKLSDS--IASNLEASRTAVSGVNLDEEAAR 629 Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 +I Q + + ++ + I+++ Sbjct: 630 LIQYQQAYQASAKMLQIAQNIFDNLIQSMG 659 >gi|308050366|ref|YP_003913932.1| flagellar hook-associated protein FlgK [Ferrimonas balearica DSM 9799] gi|307632556|gb|ADN76858.1| flagellar hook-associated protein FlgK [Ferrimonas balearica DSM 9799] Length = 636 Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 8/40 (20%), Positives = 20/40 (50%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 M +I + LA ++++ ++N++N T G+ + Sbjct: 1 MADLMSIARSGVLAAQKQMGVTSNNIANVGTEGYNRQVAE 40 >gi|255022062|ref|ZP_05294068.1| Flagellar hook-associated protein flgK [Acidithiobacillus caldus ATCC 51756] gi|254968548|gb|EET26104.1| Flagellar hook-associated protein flgK [Acidithiobacillus caldus ATCC 51756] Length = 661 Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 27/79 (34%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 +GL+ LA E L TV++N++N +T G+ + + V + Sbjct: 7 LQVGLSGVLASENALQTVSNNIANENTPGYVSEVANLATNPSQPTTFPGGLGEGVQTASI 66 Query: 65 YLSKEVGSFISTGTELDFA 83 + + A Sbjct: 67 SRNFSKFAQTQFMNATSMA 85 >gi|268316361|ref|YP_003290080.1| flagellar basal-body rod protein FlgC [Rhodothermus marinus DSM 4252] gi|262333895|gb|ACY47692.1| flagellar basal-body rod protein FlgC [Rhodothermus marinus DSM 4252] Length = 166 Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 6/42 (14%), Positives = 19/42 (45%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ + N + EM +I + + + + I ++ + + Sbjct: 123 GYVAYPDVNVVEEMAHLISANRIYEANLSTIQAAKEIVKRTL 164 Score = 35.6 bits (80), Expect = 6.7, Method: Composition-based stats. Identities = 18/128 (14%), Positives = 34/128 (26%), Gaps = 2/128 (1%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66 A +S +N++N T RT + + A+ + + + L Sbjct: 13 TAARGLEAQRMAMSAATENIANAATT--RTDEGTPYAIKRAVHTNPEVRNRRFYELLSRL 70 Query: 67 SKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDM 126 + + L L I T R++ A+G D+ Sbjct: 71 RTAPRTQDPRHSSSPSLLTRLPEAELGPETTIAETLRLRYEYDPTHPHADANGYVAYPDV 130 Query: 127 ASVPIQIP 134 V Sbjct: 131 NVVEEMAH 138 >gi|289666054|ref|ZP_06487635.1| flagellar hook-associated protein FlgK [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 223 Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 27/42 (64%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 + + G +A +A ++ LSTV+ N++N +T G+ +V+F+ Sbjct: 1 MSIMSTGTSALIAFQRALSTVSHNVANINTEGYSRQRVEFAT 42 >gi|317130315|ref|YP_004096597.1| flagellar hook-associated protein FlgK [Bacillus cellulosilyticus DSM 2522] gi|315475263|gb|ADU31866.1| flagellar hook-associated protein FlgK [Bacillus cellulosilyticus DSM 2522] Length = 550 Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 16/40 (40%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 A + L T N++N +T G+ +V FS Sbjct: 8 GLETARRAMTTHQSALHTTGHNIANANTPGYSRQRVNFST 47 Score = 44.5 bits (103), Expect = 0.012, Method: Composition-based stats. Identities = 7/39 (17%), Positives = 14/39 (35%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 + EM MI +N+ I ++ + I + Sbjct: 508 VSLDEEMTNMIQFQHAYNAAARNITMIDEMLDIIINRMG 546 >gi|220934391|ref|YP_002513290.1| flagellar basal-body rod protein FlgB [Thioalkalivibrio sp. HL-EbGR7] gi|219995701|gb|ACL72303.1| flagellar basal-body rod protein FlgB [Thioalkalivibrio sp. HL-EbGR7] Length = 130 Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 10/51 (19%), Positives = 20/51 (39%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 + I A +RL +A N++N DT ++ + F + + Sbjct: 6 DKALGIHADALQLRSRRLELLASNLANADTPNYKARDIDFRAALSQAQGGG 56 >gi|15606427|ref|NP_213807.1| flagellar biosynthesis FlgC [Aquifex aeolicus VF5] gi|6225342|sp|O67243|FLGC_AQUAE RecName: Full=Flagellar basal-body rod protein flgC gi|2983627|gb|AAC07195.1| flagellar biosynthesis FlgC [Aquifex aeolicus VF5] Length = 134 Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 6/41 (14%), Positives = 14/41 (34%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 G++ N + EM MI + + + ++ Sbjct: 89 GYVRLPNIEPVKEMVDMITAVRSYEANLKAFSLTKEIFERT 129 Score = 44.5 bits (103), Expect = 0.013, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 25/48 (52%), Gaps = 4/48 (8%) Query: 1 MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46 M + +I + A R++TVA N++N ++ F++ F+ +V Sbjct: 2 MDIFNALDISASGMYAQRIRMNTVASNLANYES--FKSDGTPFNRLVP 47 >gi|328470107|gb|EGF41018.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus 10329] Length = 457 Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 17/99 (17%), Positives = 31/99 (31%), Gaps = 1/99 (1%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 NI L+ A L A N+++ +T G+ + + VG K++ V Sbjct: 1 MNLVNIALSGLNANRVALDVTAQNVASVNTPGYSRQQALMAT-VGDGKSNRLSSGMGVEV 59 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL 100 + T + A + + S L Sbjct: 60 TSIRRVTDQFLVKQTWSTNSLAAYAAGYTSSMSQLENTL 98 >gi|238755319|ref|ZP_04616662.1| hypothetical protein yruck0001_10770 [Yersinia ruckeri ATCC 29473] gi|238706455|gb|EEP98829.1| hypothetical protein yruck0001_10770 [Yersinia ruckeri ATCC 29473] Length = 547 Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 19/42 (45%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 N ++ A + LSTV +N+SN G+ F++ Sbjct: 3 NNLINTAMSGLSAAQYALSTVGNNISNFQVTGYNRQNAIFAQ 44 >gi|332140552|ref|YP_004426290.1| flagellar hook-associated protein FlgK [Alteromonas macleodii str. 'Deep ecotype'] gi|327550574|gb|AEA97292.1| flagellar hook-associated protein FlgK [Alteromonas macleodii str. 'Deep ecotype'] Length = 680 Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 7/35 (20%), Positives = 17/35 (48%) Query: 8 GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS 42 + A + L T ++N++N +T G+ + + Sbjct: 10 ATSGVNASSKLLQTTSNNIANVNTPGYVRERTELQ 44 >gi|312621565|ref|YP_004023178.1| flagellar basal-body rod protein flgb [Caldicellulosiruptor kronotskyensis 2002] gi|312202032|gb|ADQ45359.1| flagellar basal-body rod protein FlgB [Caldicellulosiruptor kronotskyensis 2002] Length = 133 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 7/56 (12%), Positives = 20/56 (35%) Query: 21 TVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76 +++N++N DT G++ + F + + + + + S Sbjct: 24 IISNNIANADTPGYKAKDLNFEAFLQRSLDQEESLELVTTNERHIKESSSNPDNSI 79 >gi|308068649|ref|YP_003870254.1| flagellar basal-body rod protein FlgB [Paenibacillus polymyxa E681] gi|305857928|gb|ADM69716.1| flagellar basal-body rod protein FlgB [Paenibacillus polymyxa E681] Length = 135 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 27/71 (38%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69 A A R +ADN+SN DT F+ +V F E++ + + + + Sbjct: 14 AGVQAANTRQRVMADNISNADTPYFKRSEVSFEELLQQQMDGDVTPLRGKVTNSRHFQIG 73 Query: 70 VGSFISTGTEL 80 + I T Sbjct: 74 PVNSIPDATVT 84 >gi|292492360|ref|YP_003527799.1| flagellar basal-body rod protein FlgB [Nitrosococcus halophilus Nc4] gi|291580955|gb|ADE15412.1| flagellar basal-body rod protein FlgB [Nitrosococcus halophilus Nc4] Length = 133 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 26/68 (38%), Gaps = 4/68 (5%) Query: 1 MQTSFNIGLA----AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56 M SF+ L A +R +A N++N DT G++ + F + + Sbjct: 1 MSISFDSALGIHPYALSLWSRRAELLAANLANADTPGYKARDIDFKTALQQAQGQGAALP 60 Query: 57 SFVASGKE 64 V G+ Sbjct: 61 LQVTHGRH 68 >gi|332187895|ref|ZP_08389628.1| flagellar basal-body rod protein FlgB [Sphingomonas sp. S17] gi|332012056|gb|EGI54128.1| flagellar basal-body rod protein FlgB [Sphingomonas sp. S17] Length = 115 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 23/57 (40%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66 AA QR+ +A N++N T GF+ + F + A++ + A Sbjct: 12 AALEVRGQRMGVLASNIANASTPGFKARDIDFKAALAAVEGGQQDQGIAKAMKYRVP 68 >gi|315654567|ref|ZP_07907473.1| flagellar hook-associated protein FlgK [Mobiluncus curtisii ATCC 51333] gi|315491031|gb|EFU80650.1| flagellar hook-associated protein FlgK [Mobiluncus curtisii ATCC 51333] Length = 681 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44 +S N GL A ++ + N++N +T G+ +V+ + Sbjct: 6 SSLNAGLTGLYAAQRLIEVSGQNINNMNTPGYTRQRVEQRAL 47 Score = 40.6 bits (93), Expect = 0.18, Method: Composition-based stats. Identities = 4/39 (10%), Positives = 12/39 (30%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S+ + E+ +I + ++ + I Sbjct: 640 QSSVDMNEEVINLIQGQHAYAGAARIMSTVNSMLEALIN 678 >gi|258514001|ref|YP_003190223.1| flagellar basal-body rod protein FlgC [Desulfotomaculum acetoxidans DSM 771] gi|257777706|gb|ACV61600.1| flagellar basal-body rod protein FlgC [Desulfotomaculum acetoxidans DSM 771] Length = 140 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 8/44 (18%), Positives = 22/44 (50%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 + G + N N + EM M+ + + + T ++ ++ ++A+ Sbjct: 92 QEGNVAYPNINIVNEMVNMMAARRAYEANATALEASKSMAMKAL 135 Score = 43.3 bits (100), Expect = 0.028, Method: Composition-based stats. Identities = 12/92 (13%), Positives = 33/92 (35%), Gaps = 6/92 (6%) Query: 14 ALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLS 67 A L +++N++N +T G ++ FS+ + ++ + + V + Sbjct: 16 AERLWLDIISNNIANLNTTRTAKGGPYKRQMPVFSQRLQSVVDSAKTRAGGVEVNRVVQD 75 Query: 68 KEVGSFISTGTELDFALEGDAWFALESPRGII 99 + + D EG+ + + + Sbjct: 76 NAPPRMVYDPSHPDADQEGNVAYPNINIVNEM 107 >gi|114330359|ref|YP_746581.1| flagellar basal-body rod protein FlgC [Nitrosomonas eutropha C91] gi|114307373|gb|ABI58616.1| flagellar basal-body rod protein FlgC [Nitrosomonas eutropha C91] Length = 134 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 6/43 (13%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N + EM M+ ++ + + +++ + + + + Sbjct: 89 GYVTLPNVNVVDEMVNMMSASRSYQNSVDMMNVTKTLLQKTLS 131 Score = 42.5 bits (98), Expect = 0.047, Method: Composition-based stats. Identities = 21/118 (17%), Positives = 41/118 (34%), Gaps = 6/118 (5%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNT----DTVG--FRTIKVKFSEVVGAIKNDIDQKISF 58 FN+ +A A QRL+ VA N++N + G +R+ +V F V + K++ Sbjct: 7 FNVAGSAMAAQSQRLNVVASNLANADSATSSTGEAYRSRQVVFRTVDISADKAKGVKVAG 66 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVS 116 + + E + + E + +R + V + Sbjct: 67 IVHDPSPMRVVYDPKHPMADEKGYVTLPNVNVVDEMVNMMSASRSYQNSVDMMNVTKT 124 >gi|222530142|ref|YP_002574024.1| flagellar basal-body rod protein FlgB [Caldicellulosiruptor bescii DSM 6725] gi|222456989|gb|ACM61251.1| flagellar basal-body rod protein FlgB [Caldicellulosiruptor bescii DSM 6725] Length = 133 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 8/55 (14%), Positives = 20/55 (36%) Query: 21 TVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIS 75 +++N++N DT G++ + F + N + + + S Sbjct: 24 IISNNIANADTPGYKAKDLNFRAFLQRSLNQEESLELVTTNERHIKESSSNPDNS 78 >gi|207111880|ref|ZP_03246042.1| flagellar basal body rod protein FlgG [Helicobacter pylori HPKX_438_CA4C1] Length = 36 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 4/34 (11%), Positives = 15/34 (44%), Gaps = 1/34 (2%) Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 EM +I + + + + I + + + + ++ Sbjct: 1 EEMTDLITAQRAYEANSKSIQTADAML-QTVNSL 33 >gi|307546962|ref|YP_003899441.1| flagellar hook-associated protein FlgK [Halomonas elongata DSM 2581] gi|307218986|emb|CBV44256.1| flagellar hook-associated protein FlgK [Halomonas elongata DSM 2581] Length = 555 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 21/42 (50%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 + F+ GL+ A + LST ++N+SN T G+ E Sbjct: 1 MSIFSTGLSGLNAAQNALSTTSNNISNVFTPGYNREVAILGE 42 Score = 39.1 bits (89), Expect = 0.62, Method: Composition-based stats. Identities = 6/38 (15%), Positives = 14/38 (36%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N E +I Q + + +I+ + + + Sbjct: 514 ASGVNLDEEAANLIRYQQYYQANAKVIEAGKTMIDTIL 551 >gi|34498334|ref|NP_902549.1| flagellar hook-associated protein 1 [Chromobacterium violaceum ATCC 12472] gi|34104188|gb|AAQ60547.1| flagellar hook-associated protein 1 [Chromobacterium violaceum ATCC 12472] Length = 595 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 22/176 (12%), Positives = 53/176 (30%), Gaps = 3/176 (1%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKF--SEVVGAIKNDIDQKISFVASGKE 64 IGL+ + LS ++N+SN +T G+ + V A + Q + + + Sbjct: 11 IGLSGLNVAQNALSVTSNNISNVNTPGYNAQYMTQAGRTPVNAGFGYLGQGVDATSVMRT 70 Query: 65 YLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGR-FKVTDDGSLVSASGKYPV 123 Y V + T + + T+ + G++ + + + Sbjct: 71 YNQYLVTQMQTAQTNSSYYTTQSQQLQQVANMIQNSTQSVSPAIQSFFGAMQTLTQQPNS 130 Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 + + Q ++ Q + + SV ++ + Sbjct: 131 TASRQAVLGMAQALATSMTSMNSQLQQIQQGVNNQISSSVQSINALAQQIANLNQQ 186 >gi|303325592|ref|ZP_07356035.1| flagellar hook-associated protein FlgK [Desulfovibrio sp. 3_1_syn3] gi|302863508|gb|EFL86439.1| flagellar hook-associated protein FlgK [Desulfovibrio sp. 3_1_syn3] Length = 710 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 26/79 (32%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 NIG +A A + +S +N++N DT G+ V + G Q + A Sbjct: 6 LNIGQSALNASQAWISVTGNNLANADTEGYSRQYVDQRDAGGLTAKPGAQGLGVNAQQIM 65 Query: 65 YLSKEVGSFISTGTELDFA 83 + A Sbjct: 66 RFFDSFLERSYVRQATNSA 84 Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 7/37 (18%), Positives = 14/37 (37%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N EM +I + + LI ++ + + Sbjct: 670 SGVNMDEEMSNLIKFQHSYTAAAKLITTADQMLQTLL 706 >gi|77918753|ref|YP_356568.1| flagellar hook-associated protein [Pelobacter carbinolicus DSM 2380] gi|77544836|gb|ABA88398.1| flagellar hook-associated protein [Pelobacter carbinolicus DSM 2380] Length = 464 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 6/36 (16%), Positives = 14/36 (38%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + EM +I + F + L+ ++ M + Sbjct: 426 VSLEEEMINLIQYQRGFEASAKLLTTVDEMMDTVLS 461 Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 9/50 (18%), Positives = 18/50 (36%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 + N+G + + L +N++N +T G+ V V Sbjct: 7 ALNLGKTSLATHQTLLDVTGNNIANVNTDGYSRQSVDLGTVPALNFRGFQ 56 >gi|127512285|ref|YP_001093482.1| flagellar hook-associated protein FlgK [Shewanella loihica PV-4] gi|126637580|gb|ABO23223.1| flagellar hook-associated protein FlgK [Shewanella loihica PV-4] Length = 638 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 12/80 (15%), Positives = 29/80 (36%), Gaps = 1/80 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M NI LA + +L+ ++N++N +T G+ + S + + Sbjct: 3 MD-LLNIARTGVLASQSQLAVTSNNITNANTQGYHRQVAEQSSLESQRLGNSFYGAGTYI 61 Query: 61 SGKEYLSKEVGSFISTGTEL 80 + + + E + + Sbjct: 62 TDVKRIYNEYAARELRIGQT 81 Score = 35.2 bits (79), Expect = 8.5, Method: Composition-based stats. Identities = 4/41 (9%), Positives = 13/41 (31%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E ++ Q + + ++ + ++ Sbjct: 598 SGVNLDEEAANLMRFQQSYQASARIMTTATEIFDTLFSSVR 638 >gi|114777413|ref|ZP_01452410.1| Flagellar basal-body rod protein FlgC [Mariprofundus ferrooxydans PV-1] gi|114552195|gb|EAU54697.1| Flagellar basal-body rod protein FlgC [Mariprofundus ferrooxydans PV-1] Length = 148 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 9/46 (19%), Positives = 23/46 (50%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G ++ N N + EM M + F + T ++ +++ L+++ + Sbjct: 103 GIVKMPNVNPVEEMVDMNSAARSFEANVTTMEASKRMFLKSLELLR 148 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 6/54 (11%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIK 49 +S +I + A R+ VA+N++N + G +R +V F V A Sbjct: 6 LSSMHISASGMSAQRTRMDIVAENIANAGSTRTSEGGPYRRRQVIFQAVSPAQP 59 >gi|332981428|ref|YP_004462869.1| flagellar basal-body rod protein FlgB [Mahella australiensis 50-1 BON] gi|332699106|gb|AEE96047.1| flagellar basal-body rod protein FlgB [Mahella australiensis 50-1 BON] Length = 137 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 15/41 (36%), Positives = 23/41 (56%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51 A L R ++DN++N DT GF+ KV F +V+ +D Sbjct: 17 ALDGLWMRNQVISDNVANVDTPGFKASKVAFEDVLKGALDD 57 >gi|317047689|ref|YP_004115337.1| flagellar basal-body rod protein FlgC [Pantoea sp. At-9b] gi|316949306|gb|ADU68781.1| flagellar basal-body rod protein FlgC [Pantoea sp. At-9b] Length = 134 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 9/92 (9%), Positives = 36/92 (39%) Query: 148 ISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSM 207 K + + M+ G V+ P+ + + + ++G+++ N + + Sbjct: 40 QPYVAKQVVFQTDAAPGMATGGVKVAGVVDDPSPAKLVYDPGNPMADQKGYVKMPNVDVV 99 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E + ++ + + +++ + M++ + Sbjct: 100 AETVNTMSASRSYQANVEVLNTVKSMMMKTLT 131 Score = 35.6 bits (80), Expect = 5.8, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 24/68 (35%), Gaps = 6/68 (8%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSEVVGAIKNDIDQK 55 F+I +A A QRL+ A N++N G + +V F K Sbjct: 4 LNIFDIAGSAMTAQSQRLNVSASNLANADSVTGPDGQPYVAKQVVFQTDAAPGMATGGVK 63 Query: 56 ISFVASGK 63 ++ V Sbjct: 64 VAGVVDDP 71 >gi|153953776|ref|YP_001394541.1| flagellar basal body rod protein FlgC [Clostridium kluyveri DSM 555] gi|219854392|ref|YP_002471514.1| hypothetical protein CKR_1049 [Clostridium kluyveri NBRC 12016] gi|146346657|gb|EDK33193.1| FlgC [Clostridium kluyveri DSM 555] gi|219568116|dbj|BAH06100.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 143 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 19/42 (45%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N N + EM M+ + + + + I + +A+ Sbjct: 98 GYVSMPNVNILNEMADMMVAVRSYEANLSAISAEKSMFSKAL 139 Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 26/74 (35%), Gaps = 9/74 (12%) Query: 1 MQTSFNI---GLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKND 51 M +FN + A R+ T+A NM+N +T +R F E + N Sbjct: 1 MIQAFNTLRISASGLSAERLRMDTIASNMANVETTKGADGNPYRRKIAVFQENLQKQLNK 60 Query: 52 IDQKISFVASGKEY 65 + + K Sbjct: 61 AGRYENVSQGVKAV 74 >gi|257871286|ref|ZP_05650939.1| flagellar basal-body rod protein FlgB [Enterococcus gallinarum EG2] gi|257805450|gb|EEV34272.1| flagellar basal-body rod protein FlgB [Enterococcus gallinarum EG2] Length = 136 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 10/58 (17%), Positives = 22/58 (37%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLS 67 A QR ++ N++N +T G++ ++ F + + AS + Sbjct: 26 TAMNVSAQRAELISSNIANVNTDGYKAKRIVFESELKQALASSGTDAATEASVSQVKP 83 >gi|23499914|ref|NP_699354.1| flagellar basal body rod protein FlgC [Brucella suis 1330] gi|23463491|gb|AAN33359.1| flagellar basal-body rod protein FlgC [Brucella suis 1330] Length = 140 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 8/47 (17%), Positives = 21/47 (44%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G+++ N N + EM M + + + ++ + + + I + S Sbjct: 93 GYVKYPNVNMVVEMADMREANRSYEANLQVVRQARELISMTIDLLRS 139 Score = 44.5 bits (103), Expect = 0.012, Method: Composition-based stats. Identities = 13/106 (12%), Positives = 32/106 (30%), Gaps = 8/106 (7%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQ 54 Q++ I + A RL V++N++N + +R V F + + Sbjct: 7 QSTLKIAASGLSAQSTRLCIVSENIANAQSTAKTADTDPYRRKTVSFRTELEQGTGAAEV 66 Query: 55 KISFVA-SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 +++ V ++ + S + + Sbjct: 67 RVAEVGKDTSPFIEQYDPSHPAADARGYVKYPNVNMVVEMADMREA 112 >gi|296135675|ref|YP_003642917.1| flagellar basal-body rod protein FlgC [Thiomonas intermedia K12] gi|294339845|emb|CAZ88208.1| Flagellar basal-body rod protein flgC (Putative proximal rod protein) [Thiomonas sp. 3As] gi|295795797|gb|ADG30587.1| flagellar basal-body rod protein FlgC [Thiomonas intermedia K12] Length = 138 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 7/31 (22%), Positives = 16/31 (51%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 G++ N N + EM MI ++ + + ++ Sbjct: 93 GYVSYPNVNPVDEMVNMISASRAYQADVNVM 123 Score = 39.5 bits (90), Expect = 0.48, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 24/47 (51%), Gaps = 6/47 (12%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTD----TVG--FRTIKVKFSE 43 ++ ++ + A RL+ VA N++N + + G +R +V F+ Sbjct: 5 SALDVANSGLTAESYRLNVVASNLANANSAVSSNGQPYRAREVVFAA 51 >gi|240145510|ref|ZP_04744111.1| flagellar basal-body rod protein FlgB [Roseburia intestinalis L1-82] gi|257202325|gb|EEV00610.1| flagellar basal-body rod protein FlgB [Roseburia intestinalis L1-82] gi|291535999|emb|CBL09111.1| flagellar basal-body rod protein FlgB [Roseburia intestinalis M50/1] gi|291538493|emb|CBL11604.1| flagellar basal-body rod protein FlgB [Roseburia intestinalis XB6B4] Length = 131 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 19/40 (47%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50 A A R + + +N++N DT G++ V F V+ Sbjct: 16 AADASWMRENVITNNIANIDTPGYKRQDVDFESVLQKALG 55 >gi|90408066|ref|ZP_01216237.1| flagellar hook-associated protein 1 FlgK [Psychromonas sp. CNPT3] gi|90310823|gb|EAS38937.1| flagellar hook-associated protein 1 FlgK [Psychromonas sp. CNPT3] Length = 693 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 25/201 (12%), Positives = 57/201 (28%), Gaps = 5/201 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M F IGL+ + + L+T N++N +T G+ V EVV + Sbjct: 1 MADLFQIGLSGIHSSQASLATTGHNIANINTKGYSRQSV---EVVTGGADRYGSNFIGRG 57 Query: 61 SGKEYLSKEVGSFISTGTELDFA--LEGDAWFALESPRGIILTRDGRFKVTDDGSLVSAS 118 + + + F T ++ + F + +L+ + A Sbjct: 58 ALVNSIERAYDRFAFTENVMNTSQLAYSKEVFTQTNQIDALLSDSSTSATKPVLEVFKAI 117 Query: 119 GKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGIS 178 Q+ + + + + ++ + + S + ++ Sbjct: 118 NGVADHPNMLESRQVFLESSSNMINQYHRLYDNLEIQYNSINHDITNSAKTLTTLAENVA 177 Query: 179 PNIPPTPLEDLSGVTVKRGFL 199 SG + L Sbjct: 178 QLNVQIAAVLGSGGDSRSNDL 198 Score = 36.0 bits (81), Expect = 5.1, Method: Composition-based stats. Identities = 18/139 (12%), Positives = 43/139 (30%), Gaps = 8/139 (5%) Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171 G + V P+ +N G+ S ++ A G ++ ++ + Sbjct: 555 GKVTFNIAGIDVEMYQGSPLVGDIFSLNYNETGDGDNSNILEMAALQGKKIMNNNKATFQ 614 Query: 172 RENSGISPNIPPTPLEDL----SGVTVKRGFLED----SNANSMYEMGQMIHLTQKFNSI 223 SG+ I S +++ E S N E ++ Q +++ Sbjct: 615 DIYSGMISEIGSRTANADISMKSATILQQQSFERVENVSGVNMDEEAANLLMFQQHYSAA 674 Query: 224 TTLIDENEKSMLEAIRNIA 242 +I + ++ + Sbjct: 675 ARVISVAGELFDTILQAVR 693 >gi|23092313|gb|AAN08638.1| FlgC [Aeromonas hydrophila] Length = 139 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 22/43 (51%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 GF+ N N + EM M + ++ + + + D +K + + ++ Sbjct: 93 GFIFKPNVNMVEEMADMTNASRSYQTNVQVADSAKKMLQQTLQ 135 Score = 36.0 bits (81), Expect = 4.4, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56 F+I +A A RL+TVA NM+N D+V + + F+ + +D + Sbjct: 5 KVFDIAGSAMSAQSVRLNTVASNMANADSVSSSVENTYHARRPIFAAQLDQAMSDKQASV 64 >gi|117923397|ref|YP_864014.1| flagellar hook-associated protein FlgK [Magnetococcus sp. MC-1] gi|117607153|gb|ABK42608.1| flagellar hook-associated protein FlgK [Magnetococcus sp. MC-1] Length = 588 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 28/58 (48%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 + NI L+ + LS+V+ N++N +T G+ + GA++ + D VA Sbjct: 11 SLLNISKTGLLSNQYALSSVSQNIANVNTAGYSRQTAALTSNQGALRGNTDGIGGGVA 68 Score = 45.6 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 4/37 (10%), Positives = 16/37 (43%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S + E+ ++ + F + + ++ ++ + I Sbjct: 548 SGVSLEEELTDLMRFQRAFQASSKMVVTADELLQSVI 584 >gi|149191159|ref|ZP_01869417.1| putative flagellar hook-associated protein [Vibrio shilonii AK1] gi|148834997|gb|EDL51976.1| putative flagellar hook-associated protein [Vibrio shilonii AK1] Length = 459 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 33/97 (34%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 NIGL+ LA L+T A N +N +T G+ V + + V G Sbjct: 3 MVNIGLSGVLANRVALNTTAQNTANVNTPGYSRQVVSLEATSSGNFVNGINLGAGVEVGD 62 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL 100 E S + A ++F S +L Sbjct: 63 IIRIAEQSSINRLREATESAQYSQSYFDGLSNIENLL 99 Score = 37.5 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 6/37 (16%), Positives = 12/37 (32%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S NS E M+ + + +I + + Sbjct: 420 SAVNSDEEAANMLLYLNAYEANMKVISTANQMFQTLL 456 >gi|15895480|ref|NP_348829.1| flagellar hook-associated protein FlgK [Clostridium acetobutylicum ATCC 824] gi|15025209|gb|AAK80169.1|AE007721_9 Flagellar hook-associated protein FlgK [Clostridium acetobutylicum ATCC 824] gi|325509627|gb|ADZ21263.1| Flagellar hook-associated protein FlgK [Clostridium acetobutylicum EA 2018] Length = 634 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 10/36 (27%), Positives = 17/36 (47%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 NIG++ +Q + N+SN T G+ +V Sbjct: 8 LNIGVSGLTVNQQAIDVTGHNISNASTDGYSRQRVD 43 Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 6/41 (14%), Positives = 17/41 (41%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 S + EM +I + + + +I ++ + + N+ Sbjct: 592 TSGVSLDEEMTNLIQYSHGYQASAKIISTVDQLLDVVVNNL 632 >gi|329297212|ref|ZP_08254548.1| flagellar basal body rod protein FlgC [Plautia stali symbiont] Length = 134 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 11/127 (8%), Positives = 43/127 (33%) Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172 ++ +G + + D +V K + + + G V+ Sbjct: 5 NIFDIAGSAMTAQSQRLNVSASNLDNADSVTGPDGQPYVAKQVIFQTDAAQGAATGGVKV 64 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 P + + + ++G+++ N + + E + ++ + + +++ + Sbjct: 65 AGVVNDPTPAKLVYDPGNPLADQKGYVKMPNVDVVAETVNTMSASRSYQANVEVLNTVKS 124 Query: 233 SMLEAIR 239 M++ + Sbjct: 125 MMMKTLT 131 >gi|110632658|ref|YP_672866.1| flagellar basal body rod protein FlgC [Mesorhizobium sp. BNC1] gi|110283642|gb|ABG61701.1| flagellar basal-body rod protein FlgC [Chelativorans sp. BNC1] Length = 139 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 14/99 (14%), Positives = 30/99 (30%) Query: 145 KGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNA 204 G + K I+ V P P + G+++ N Sbjct: 39 PGGDPYRRKTISFAAELGRGNGGAMVEVSAIARDPAEFPVEYMPGHEAADEFGYVKMPNV 98 Query: 205 NSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 N + EM M + + + ++ + + + I + S Sbjct: 99 NMLVEMADMREANRGYEANLQVVKQARELISMTIDLLRS 137 Score = 40.2 bits (92), Expect = 0.26, Method: Composition-based stats. Identities = 12/101 (11%), Positives = 33/101 (32%), Gaps = 8/101 (7%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQKISFV 59 I + A +R+ V++N++N + +R + F+ +G ++S + Sbjct: 10 IAGSGLAAQSERMRVVSENLANAQSTSEVPGGDPYRRKTISFAAELGRGNGGAMVEVSAI 69 Query: 60 A-SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 A E+ + + + + + Sbjct: 70 ARDPAEFPVEYMPGHEAADEFGYVKMPNVNMLVEMADMREA 110 >gi|196249402|ref|ZP_03148100.1| flagellar hook-associated protein FlgK [Geobacillus sp. G11MC16] gi|196211159|gb|EDY05920.1| flagellar hook-associated protein FlgK [Geobacillus sp. G11MC16] Length = 528 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 8/41 (19%), Positives = 16/41 (39%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S + EM MI +N+ I ++ + + I + Sbjct: 484 SAVSLDEEMMNMIKFQHAYNAAARQITAIDEMLDKIINGMG 524 Score = 44.5 bits (103), Expect = 0.013, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 26/68 (38%), Gaps = 3/68 (4%) Query: 1 MQTSFN---IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS 57 M ++F+ A +A + L T N++N +T G+ +V+ +++ Sbjct: 1 MLSTFHGLEAARRAMMAQQAALYTTGHNIANANTEGYTRQRVQLEATTPFPTPGLNRPNI 60 Query: 58 FVASGKEY 65 G Sbjct: 61 PGQMGTGV 68 >gi|30248320|ref|NP_840390.1| flagella basal body rod protein [Nitrosomonas europaea ATCC 19718] gi|30138206|emb|CAD84214.1| Flagella basal body rod protein [Nitrosomonas europaea ATCC 19718] Length = 134 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 22/43 (51%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N + EM M+ ++ + + +++ + + +A+ Sbjct: 89 GYVTLPNVNVVDEMVNMMSASRSYQNSVDMMNVTKTLLQKALT 131 Score = 41.4 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 20/118 (16%), Positives = 41/118 (34%), Gaps = 6/118 (5%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNT----DTVG--FRTIKVKFSEVVGAIKNDIDQKISF 58 FN+ ++ A QRL+ VA N++N + G +R+ +V F + K++ Sbjct: 7 FNVAGSSMAAQSQRLNVVASNLANADSATSSTGEAYRSRQVVFRTIDVTADKAKGVKVAG 66 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVS 116 V + + E + + E + +R + V + Sbjct: 67 VVNDPSPMRVVYDPKHPMANEKGYVTLPNVNVVDEMVNMMSASRSYQNSVDMMNVTKT 124 >gi|157373201|ref|YP_001471801.1| flagellar hook-associated protein FlgK [Shewanella sediminis HAW-EB3] gi|157315575|gb|ABV34673.1| flagellar hook-associated protein FlgK [Shewanella sediminis HAW-EB3] Length = 457 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 7/41 (17%), Positives = 15/41 (36%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 S N E +I Q + + +I ++ + +I Sbjct: 417 TSGVNMDEEAVNLIIYQQSYQANAKVISTADQLFQTILNSI 457 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 22/43 (51%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44 + NIG++ A L+T ++N++N G+ +V S V Sbjct: 1 MSMLNIGMSGLNASMAALNTTSNNVANAMVPGYSRQQVMMSSV 43 >gi|326319103|ref|YP_004236775.1| flagellar hook-associated protein FlgK [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375939|gb|ADX48208.1| flagellar hook-associated protein FlgK [Acidovorax avenae subsp. avenae ATCC 19860] Length = 643 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 21/51 (41%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 + N+G A LA + L T N++N +T G+ + V G Sbjct: 1 MSLLNVGARALLANQVALQTAGHNIANVNTAGYSRQTLSLQTVQGQFTGGG 51 Score = 41.4 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 17/149 (11%), Positives = 35/149 (23%), Gaps = 9/149 (6%) Query: 99 ILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158 T + G ++ G D V + + G S + Sbjct: 498 AYTPGQPITID--GWEITLKGTPGTGDTVKVGNALDAQYGDAYKRNAGNASAIDALGDVK 555 Query: 159 GLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLED-----SNANSMYEMGQM 213 MS G+ + LE + N E ++ Sbjct: 556 MFDDATMSDGYAGLM--AQVGTRMQNAKYASDVSSTISTNLERDRSAVAGVNLDEEAAKL 613 Query: 214 IHLTQKFNSITTLIDENEKSMLEAIRNIA 242 I Q + + ++ + I+ + Sbjct: 614 IQYQQAYQASAKVLQIAQSIFDNLIQTMG 642 >gi|15895433|ref|NP_348782.1| flagellar basal body rod protein FlgC [Clostridium acetobutylicum ATCC 824] gi|15025157|gb|AAK80122.1|AE007716_11 Flagellar basal body rod protein FlgC [Clostridium acetobutylicum ATCC 824] gi|325509579|gb|ADZ21215.1| flagellar basal body rod protein FlgC [Clostridium acetobutylicum EA 2018] Length = 143 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 22/42 (52%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N N + EM M+ T+ + + T +++ + +A+ Sbjct: 98 GYVAMPNVNILNEMADMMASTRAYEANVTAMNDEKGMYTKAL 139 Score = 39.1 bits (89), Expect = 0.55, Method: Composition-based stats. Identities = 9/39 (23%), Positives = 16/39 (41%), Gaps = 6/39 (15%) Query: 11 AQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43 A R+ T++ N++N T G +R F + Sbjct: 13 GLSAERLRMDTISSNIANISTTRTADGGPYRRKVAVFQD 51 >gi|325567496|ref|ZP_08144163.1| hypothetical protein HMPREF9087_0452 [Enterococcus casseliflavus ATCC 12755] gi|325158929|gb|EGC71075.1| hypothetical protein HMPREF9087_0452 [Enterococcus casseliflavus ATCC 12755] Length = 507 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 11/57 (19%), Positives = 19/57 (33%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 S A + L T + N++NT+T G+ +V + V Sbjct: 7 SLGTATRGMTANQAALQTSSHNIANTNTDGYSRQRVNLQAEASYHLAGVGSIGMGVK 63 Score = 43.3 bits (100), Expect = 0.028, Method: Composition-based stats. Identities = 7/41 (17%), Positives = 14/41 (34%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S + EM +I Q F + ++ + + I Sbjct: 466 SGVSLNEEMSDVIRFQQGFQANARILSVVSEMLDTLINRTG 506 >gi|257871323|ref|ZP_05650976.1| flagellar hook-associated protein FlgK [Enterococcus gallinarum EG2] gi|257805487|gb|EEV34309.1| flagellar hook-associated protein FlgK [Enterococcus gallinarum EG2] Length = 507 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 11/57 (19%), Positives = 19/57 (33%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 S A + L T + N++NT+T G+ +V + V Sbjct: 7 SLGTATRGMTANQAALQTSSHNIANTNTDGYSRQRVNLQAEASYHLAGVGSIGMGVK 63 Score = 43.3 bits (100), Expect = 0.028, Method: Composition-based stats. Identities = 7/41 (17%), Positives = 14/41 (34%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S + EM +I Q F + ++ + + I Sbjct: 466 SGVSLNEEMSDVIRFQQGFQANARILSVVSEMLDTLINRTG 506 >gi|257866412|ref|ZP_05646065.1| flagellar hook-associated protein FlgK [Enterococcus casseliflavus EC30] gi|257873072|ref|ZP_05652725.1| flagellar hook-associated protein FlgK [Enterococcus casseliflavus EC10] gi|257800370|gb|EEV29398.1| flagellar hook-associated protein FlgK [Enterococcus casseliflavus EC30] gi|257807236|gb|EEV36058.1| flagellar hook-associated protein FlgK [Enterococcus casseliflavus EC10] Length = 507 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 11/57 (19%), Positives = 19/57 (33%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 S A + L T + N++NT+T G+ +V + V Sbjct: 7 SLGTATRGMTANQAALQTSSHNIANTNTDGYSRQRVNLQAEASYHLAGVGSIGMGVK 63 Score = 43.3 bits (100), Expect = 0.028, Method: Composition-based stats. Identities = 7/41 (17%), Positives = 14/41 (34%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S + EM +I Q F + ++ + + I Sbjct: 466 SGVSLNEEMSDVIRFQQGFQANARILSVVSEMLDTLINRTG 506 >gi|182412250|ref|YP_001817316.1| flagellar basal-body rod protein FlgC [Opitutus terrae PB90-1] gi|177839464|gb|ACB73716.1| flagellar basal-body rod protein FlgC [Opitutus terrae PB90-1] Length = 139 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 20/43 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G + N N YEM +I ++ + + ++ + ++ ++ Sbjct: 94 GLVTMPNVNLSYEMVDLITASRAYEANLAVVRNARQMAVKTLQ 136 Score = 42.9 bits (99), Expect = 0.042, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 30/91 (32%), Gaps = 6/91 (6%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDIDQK 55 + +I A A + RL VA N++N T G ++ V F + + Sbjct: 4 ISGIDITAGALNAQKTRLDMVAQNIANAQTTRTPNGGPYQRQVVSFETELVRREGLSGPA 63 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEG 86 + V + G + D +G Sbjct: 64 LQSVKVANVTADRSPGQQVFNPQHPDAGPDG 94 >gi|161620234|ref|YP_001594120.1| flagellar basal body rod protein FlgC [Brucella canis ATCC 23365] gi|254702574|ref|ZP_05164402.1| flagellar basal body rod protein FlgC [Brucella suis bv. 3 str. 686] gi|260568518|ref|ZP_05838987.1| flagellar basal body rod protein [Brucella suis bv. 4 str. 40] gi|261753154|ref|ZP_05996863.1| flagellar basal-body rod protein FlgC [Brucella suis bv. 3 str. 686] gi|161337045|gb|ABX63349.1| flagellar basal-body rod protein FlgC [Brucella canis ATCC 23365] gi|260155183|gb|EEW90264.1| flagellar basal body rod protein [Brucella suis bv. 4 str. 40] gi|261742907|gb|EEY30833.1| flagellar basal-body rod protein FlgC [Brucella suis bv. 3 str. 686] Length = 140 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 8/47 (17%), Positives = 21/47 (44%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G+++ N N + EM M + + + ++ + + + I + S Sbjct: 93 GYVKYPNVNMVVEMADMREANRSYEANLQVVRQARELISMTIDLLRS 139 Score = 44.5 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 13/106 (12%), Positives = 32/106 (30%), Gaps = 8/106 (7%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQ 54 Q++ I + A RL V++N++N + +R V F + + Sbjct: 7 QSTLKIAASGLSAQSTRLCIVSENIANAQSTARTADTDPYRRKTVSFRTELEQGTGAAEV 66 Query: 55 KISFVA-SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 +++ V ++ + S + + Sbjct: 67 RVAEVGKDTSPFIEQYDPSHPAADARGYVKYPNVNMVVEMADMREA 112 >gi|75675293|ref|YP_317714.1| hypothetical protein Nwi_1100 [Nitrobacter winogradskyi Nb-255] gi|74420163|gb|ABA04362.1| Protein of unknown function DUF1078 [Nitrobacter winogradskyi Nb-255] Length = 622 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 34/77 (44%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 ++ +I ++ A + LS V+ N++N +T G+ + +VV + I + Sbjct: 5 SALSIAMSGLRANQAALSIVSGNVANANTPGYVAQTLVQDQVVTGGMGSGVRVIGVNRTL 64 Query: 63 KEYLSKEVGSFISTGTE 79 Y+ ++ + + G Sbjct: 65 DAYVQSQLRTENAGGAY 81 Score = 39.1 bits (89), Expect = 0.56, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 31/93 (33%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANS 206 + G A Q FV ++ + + + T++ F + S N Sbjct: 527 PNTGLGAAAAPFQGTLSSFLQQFVSLQSGAATTARQVAQGQSIVVNTLQEKFDDKSGVNM 586 Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 EM +I L + + ++ + M ++ Sbjct: 587 DTEMANLIALQNSYAANAHVMTVVQSMMQTLMQ 619 >gi|257876025|ref|ZP_05655678.1| flagellar hook-associated protein FlgK [Enterococcus casseliflavus EC20] gi|257810191|gb|EEV39011.1| flagellar hook-associated protein FlgK [Enterococcus casseliflavus EC20] Length = 507 Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 11/57 (19%), Positives = 19/57 (33%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 S A + L T + N++NT+T G+ +V + V Sbjct: 7 SLGTATRGMTANQAALQTSSHNIANTNTDGYSRQRVNLQAEASYHLAGVGSIGMGVK 63 Score = 43.3 bits (100), Expect = 0.028, Method: Composition-based stats. Identities = 7/41 (17%), Positives = 14/41 (34%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S + EM +I Q F + ++ + + I Sbjct: 466 SGVSLNEEMSDVIRFQQGFQANARILSVVSEMLDTLINRTG 506 >gi|227112527|ref|ZP_03826183.1| flagellar hook-associated protein FlgK [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 564 Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 13/74 (17%), Positives = 28/74 (37%), Gaps = 2/74 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA--IKNDIDQKISF 58 M N ++ + LSTV++N+SN G+ + + + I ++ Sbjct: 1 MSNLINTAMSGLKGAQVALSTVSNNISNQAVTGYSRQNAILEQAISSSTSAGYIGNGVNV 60 Query: 59 VASGKEYLSKEVGS 72 V+ ++Y Sbjct: 61 VSINRQYNEFITNQ 74 >gi|331005439|ref|ZP_08328818.1| Flagellar basal-body rod protein FlgC [gamma proteobacterium IMCC1989] gi|330420715|gb|EGG95002.1| Flagellar basal-body rod protein FlgC [gamma proteobacterium IMCC1989] Length = 144 Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 9/46 (19%), Positives = 20/46 (43%), Gaps = 1/46 (2%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G + N N EM ++ T+ + + ++ + S+ +A I Sbjct: 99 GMVAYPNINPASEMVNLLEATRAYEANVKALNASI-SLAQATLEIG 143 Score = 35.6 bits (80), Expect = 6.2, Method: Composition-based stats. Identities = 9/30 (30%), Positives = 17/30 (56%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV 32 + F+I A + R+ VA N++N++T Sbjct: 5 SIFDISAAGMSVQKARVDVVALNLANSETT 34 >gi|163789653|ref|ZP_02184091.1| flagellar basal-body rod protein FlgB [Carnobacterium sp. AT7] gi|159875185|gb|EDP69251.1| flagellar basal-body rod protein FlgB [Carnobacterium sp. AT7] Length = 125 Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 26/53 (49%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 M ++N+ A A R ++ N++N +T G++ KV+F ++ + Sbjct: 1 MDPTYNLMKNALDAASMRQEMISSNIANVNTDGYKVNKVEFESILDNVSKGTT 53 >gi|149375036|ref|ZP_01892809.1| flagellar basal-body rod protein C [Marinobacter algicola DG893] gi|149360925|gb|EDM49376.1| flagellar basal-body rod protein C [Marinobacter algicola DG893] Length = 149 Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 19/43 (44%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N + EM M+ ++ F +++ + M + Sbjct: 103 GYVFYPNVNVVEEMADMMSSSRSFQMNVDIMNSAKSMMQRILT 145 Score = 40.2 bits (92), Expect = 0.22, Method: Composition-based stats. Identities = 21/92 (22%), Positives = 37/92 (40%), Gaps = 6/92 (6%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56 F+I + A RL+T A N++N +T +R K F+ + ++ N Q + Sbjct: 5 NIFDIAGSGMTAQSLRLNTTASNIANAETASSSTDQTYRARKPVFAAIQQSMLNPSQQSL 64 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDA 88 +F + V + + EL E D Sbjct: 65 AFGSDTGPGAGVRVEGIVESDAELQMRYEPDH 96 >gi|83312926|ref|YP_423190.1| flagellar hook-associated protein [Magnetospirillum magneticum AMB-1] gi|82947767|dbj|BAE52631.1| Flagellar hook-associated protein [Magnetospirillum magneticum AMB-1] Length = 858 Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 18/139 (12%), Positives = 37/139 (26%), Gaps = 12/139 (8%) Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 +R TD G + G + G + A++ Sbjct: 729 SRGSMQYNTDLGKYFLSEGDNTTALALGAAMSSKTDMATAGSLYAGSYTFAEHAAASIAQ 788 Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 S D + + G + F S N E+ MI+ Q + Sbjct: 789 VSTDA------------AHAKDRQDYQTTLGQALNSQFASTSGVNLDEEVANMINFQQAY 836 Query: 221 NSITTLIDENEKSMLEAIR 239 ++ +I ++ + + Sbjct: 837 SASAKVISTLQEMLDTLVN 855 Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 17/79 (21%), Positives = 33/79 (41%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 N L+ L ++ L ++ N+ N +T G+ ++ V A Q+ + + Sbjct: 6 GLNSALSGLLTNQKGLDVISQNVVNVNTKGYVRKQMTPESRVVAGVGAGVQQGALTRNVD 65 Query: 64 EYLSKEVGSFISTGTELDF 82 E L +++ ST LD Sbjct: 66 EGLMRDIRRQTSTQGALDV 84 >gi|172058468|ref|YP_001814928.1| flagellar hook-associated protein FlgK [Exiguobacterium sibiricum 255-15] gi|171990989|gb|ACB61911.1| flagellar hook-associated protein FlgK [Exiguobacterium sibiricum 255-15] Length = 509 Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 8/41 (19%), Positives = 16/41 (39%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S + EM MI +N+ I ++ + + I + Sbjct: 465 SAVSIDEEMTMMIQYQHAYNAAARNITTVDEMLDKIINGMG 505 Score = 39.1 bits (89), Expect = 0.49, Method: Composition-based stats. Identities = 8/40 (20%), Positives = 16/40 (40%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 G A + L + +N++N T GF ++ + Sbjct: 7 GIETGRRALTTNQWALQSTGNNIANAGTAGFSRQRLVMAT 46 >gi|224825775|ref|ZP_03698879.1| flagellar basal-body rod protein FlgC [Lutiella nitroferrum 2002] gi|224601999|gb|EEG08178.1| flagellar basal-body rod protein FlgC [Lutiella nitroferrum 2002] Length = 140 Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 6/37 (16%), Positives = 16/37 (43%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 N N + EM M+ ++ F + ++ + + + Sbjct: 99 PNVNPVEEMTDMMSASRAFQTNVEVLARVKTMQQDLL 135 Score = 42.2 bits (97), Expect = 0.069, Method: Composition-based stats. Identities = 20/99 (20%), Positives = 38/99 (38%), Gaps = 6/99 (6%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDT------VGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 I +A A RL+TVA N++N ++ FR K F+ V +D + + V Sbjct: 9 IAGSAMTAQTVRLNTVASNLANAESASGSEGAAFRARKPVFATVYRGADSDGAWQGASVQ 68 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 S + + +G+ ++ +P + Sbjct: 69 VLDVVKSDSPLRKVHEPSNPLADADGNVFYPNVNPVEEM 107 >gi|307131603|ref|YP_003883619.1| flagellar hook-associated protein flgK [Dickeya dadantii 3937] gi|306529132|gb|ADM99062.1| Flagellar hook-associated protein flgK [Dickeya dadantii 3937] Length = 640 Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 12/39 (30%), Positives = 19/39 (48%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39 M N G++ A + LSTV++N+SN G+ Sbjct: 1 MSNLINTGMSGLSAAQAALSTVSNNISNQAVTGYSRQNA 39 >gi|241589577|ref|YP_002979602.1| flagellar hook-associated protein FlgK [Ralstonia pickettii 12D] gi|240868289|gb|ACS65948.1| flagellar hook-associated protein FlgK [Ralstonia pickettii 12D] Length = 641 Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 27/71 (38%), Gaps = 3/71 (4%) Query: 1 MQTSF-NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK--NDIDQKIS 57 M +S NIG + L + N++N +T G+ +V +E D+ Q + Sbjct: 1 MSSSLLNIGASGLRTAGIHLQVIGSNIANVNTPGYSRQEVVQTENPPHYGGVGDLGQGAN 60 Query: 58 FVASGKEYLSK 68 + Y Sbjct: 61 VATVKRIYDQF 71 Score = 37.5 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 3/38 (7%), Positives = 12/38 (31%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S N E +++ + + + ++ + Sbjct: 600 SGVNLDEEAMKLMQYQKAYQASAKVMQTANSLFDTLLS 637 >gi|39936948|ref|NP_949224.1| flagellar basal body rod protein FlgC [Rhodopseudomonas palustris CGA009] gi|192292776|ref|YP_001993381.1| flagellar basal body rod protein FlgC [Rhodopseudomonas palustris TIE-1] gi|39650805|emb|CAE29328.1| flagellar basal-body rod protein flgC [Rhodopseudomonas palustris CGA009] gi|192286525|gb|ACF02906.1| flagellar basal-body rod protein FlgC [Rhodopseudomonas palustris TIE-1] Length = 141 Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 7/47 (14%), Positives = 19/47 (40%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G ++ N N + EM M + + + +I + + + + + Sbjct: 95 GNVKYPNVNPVIEMTDMRDAQRSYEANLNVISATRRMIQRTLDILKA 141 Score = 41.4 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 9/55 (16%), Positives = 21/55 (38%), Gaps = 7/55 (12%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKN 50 S I + A R+ +++N++N D+ +R F+ + + Sbjct: 10 RSMGIATSGLRAQAGRMRVISENVANADSTAQNPGGDPYRRKVPTFTSALDRTLD 64 >gi|89068702|ref|ZP_01156088.1| flagellar basal body rod protein [Oceanicola granulosus HTCC2516] gi|89045665|gb|EAR51727.1| flagellar basal body rod protein [Oceanicola granulosus HTCC2516] Length = 136 Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 11/119 (9%), Positives = 32/119 (26%) Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 + + G + K ++ + + V+ G Sbjct: 14 GMHAQGQRLRIVAENVANADSRGTTPGADPYRRKTVSFEEMIDRESGAALVKVGEIGRDT 73 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 + + GF++ N N++ EM M + + + + + + + Sbjct: 74 TDFTLVHDPAHPAADENGFVKVPNVNAIIEMTNMREAARSYEANMNMYEAGRAMRQQIL 132 Score = 43.7 bits (101), Expect = 0.022, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 7/51 (13%) Query: 7 IGLAAQLALEQRLSTVADNMSNTD----TVG---FRTIKVKFSEVVGAIKN 50 I + A QRL VA+N++N D T G +R V F E++ Sbjct: 10 IAASGMHAQGQRLRIVAENVANADSRGTTPGADPYRRKTVSFEEMIDRESG 60 >gi|206603156|gb|EDZ39636.1| Flagellar basal-body rod protein FlgC [Leptospirillum sp. Group II '5-way CG'] Length = 145 Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 29/69 (42%), Gaps = 6/69 (8%) Query: 168 GFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 G VR P +P D + G++ N + + EM ++ ++ + S T + Sbjct: 77 GMVRDPRPLNRVYDPGSPDAD------RSGYVLRPNVSKLEEMVNLLDASRAYESNLTAL 130 Query: 228 DENEKSMLE 236 D+ ++ + Sbjct: 131 DDTKQMARK 139 Score = 36.4 bits (82), Expect = 4.0, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 21/47 (44%), Gaps = 6/47 (12%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTV-G-----FRTIKVKFSEV 44 + I A R++ ++ N++N+ +V G F V F+ V Sbjct: 6 AMRIAAGGMEAERVRMNVLSGNLANSQSVHGNPRGVFERRDVIFAAV 52 >gi|317121043|ref|YP_004101046.1| flagellar hook-associated protein FlgK [Thermaerobacter marianensis DSM 12885] gi|315591023|gb|ADU50319.1| flagellar hook-associated protein FlgK [Thermaerobacter marianensis DSM 12885] Length = 520 Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 6/29 (20%), Positives = 12/29 (41%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKV 39 A ++ L N++N +T G+ Sbjct: 14 GLWAQQRALDVTGHNIANANTEGYSRQVA 42 Score = 40.2 bits (92), Expect = 0.23, Method: Composition-based stats. Identities = 6/39 (15%), Positives = 13/39 (33%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 + EM Q+I + + L+ + + I Sbjct: 478 VSLDEEMTQLIRYQHAYAAAARLVTAVDTMLGILIERTG 516 >gi|237753202|ref|ZP_04583682.1| flagellar basal-body rod protein flgc proximal rod protein [Helicobacter winghamensis ATCC BAA-430] gi|229375469|gb|EEO25560.1| flagellar basal-body rod protein flgc proximal rod protein [Helicobacter winghamensis ATCC BAA-430] Length = 166 Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 18/43 (41%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N + EM +I ++ + + + + AI Sbjct: 120 GYVAYPNINPVVEMADLIEASKAYQANVAVFQSAKNMASTAIS 162 Score = 39.9 bits (91), Expect = 0.33, Method: Composition-based stats. Identities = 9/31 (29%), Positives = 18/31 (58%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32 +SF+I A QR++ ++ N++N +T Sbjct: 3 LSSFDISGYGLSAQRQRVNLISSNIANANTT 33 >gi|218781795|ref|YP_002433113.1| hypothetical protein Dalk_3959 [Desulfatibacillum alkenivorans AK-01] gi|218763179|gb|ACL05645.1| Putative flagellar basal body rod protein [Desulfatibacillum alkenivorans AK-01] Length = 117 Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 5/40 (12%), Positives = 16/40 (40%) Query: 199 LEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 +E SN + E+ I + + + + ++ + + Sbjct: 74 VEKSNVDLAQEVTNQILAARGYEANLASVKAFDEMLGSTL 113 Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 23/43 (53%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 M N ++A A ++ + A+N +N DT G++ +V SE Sbjct: 1 MIAGINASVSALNAYGRKFQSTANNTANIDTDGYKKTRVTMSE 43 >gi|306841051|ref|ZP_07473775.1| flagellar basal-body rod protein FlgC [Brucella sp. BO2] gi|306288940|gb|EFM60240.1| flagellar basal-body rod protein FlgC [Brucella sp. BO2] Length = 107 Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 8/47 (17%), Positives = 21/47 (44%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G+++ N N + EM M + + + ++ + + + I + S Sbjct: 60 GYVKYPNVNMVVEMADMREANRSYEANLQVVRQARELISMTIDLLRS 106 >gi|242308880|ref|ZP_04808035.1| flagellar hook-protein FlgK [Helicobacter pullorum MIT 98-5489] gi|239524544|gb|EEQ64410.1| flagellar hook-protein FlgK [Helicobacter pullorum MIT 98-5489] Length = 609 Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 26/231 (11%), Positives = 67/231 (29%), Gaps = 20/231 (8%) Query: 8 GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLS 67 GL ++ +L+ +N D G F + A N+ +F + K Sbjct: 395 GLTNMQSILDQLN------ANVDGNGDANASNDFDDRFVATFNN--DTKTFAITSKNPAE 446 Query: 68 KEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMA 127 + S GT A + +F I L +K + + Sbjct: 447 EIYISIQDNGTNFAGAFGVNRFFDGNDASNIQL--AQSYKNDPTLI-------HAYREAV 497 Query: 128 SVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLE 187 ++ + + +G + + + S + Sbjct: 498 DGNFEVANMMQQLQYDKITFTDSEGNIQNETISGYF---RFIASKVASQTESTQITQETK 554 Query: 188 DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 + V++K+ + S + E+ +I +++ ++ ++ + + Sbjct: 555 EAVYVSIKQEYKAISEVSVDDELVNLIKYQSGYSANAKMVSTIDEMLNTLL 605 Score = 37.5 bits (85), Expect = 1.4, Method: Composition-based stats. Identities = 6/29 (20%), Positives = 14/29 (48%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTD 30 +S N + + TV++N++N + Sbjct: 5 LSSLNTPYTGLTGHQVMVDTVSNNIANAN 33 >gi|56460255|ref|YP_155536.1| flagellar basal body protein [Idiomarina loihiensis L2TR] gi|56179265|gb|AAV81987.1| Flagellar basal body protein [Idiomarina loihiensis L2TR] Length = 134 Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 11/75 (14%), Positives = 26/75 (34%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M I QR +A+N++N DT G++ + F + + + ++ Sbjct: 5 MDKLMGIQQHTLGVRTQRAELIANNIANADTPGYKAKGLDFQQALQQAQRGMENHKMART 64 Query: 61 SGKEYLSKEVGSFIS 75 + + + Sbjct: 65 HEQHFSVEVKPQGTE 79 >gi|161594054|ref|NP_901379.2| flagellar hook-associated protein FlgK [Chromobacterium violaceum ATCC 12472] Length = 455 Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 12/85 (14%), Positives = 26/85 (30%), Gaps = 3/85 (3%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 N L+ A + L+T + N++N T G+ V + D + Sbjct: 1 MRMINNALSGAQAAQVALNTASQNIANQQTPGYSRQGVV---LATQAPGAGDPLSAGYGV 57 Query: 62 GKEYLSKEVGSFISTGTELDFALEG 86 + + + + + G Sbjct: 58 NVSNVRRFSDDYKNLLQWQAASNVG 82 >gi|124516313|gb|EAY57821.1| Flagellar basal-body rod protein FlgC [Leptospirillum rubarum] Length = 145 Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 29/69 (42%), Gaps = 6/69 (8%) Query: 168 GFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 G VR P +P D + G++ N + + EM ++ ++ + S T + Sbjct: 77 GMVRDPRPLNRVYDPGSPDAD------RSGYVLRPNVSKLEEMVNLLDASRAYESNLTAL 130 Query: 228 DENEKSMLE 236 D+ ++ + Sbjct: 131 DDTKQMARK 139 Score = 36.0 bits (81), Expect = 4.1, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 21/47 (44%), Gaps = 6/47 (12%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTV-G-----FRTIKVKFSEV 44 + I A R++ +A N++N+ +V G F V F+ V Sbjct: 6 AMRIAAGGMEAERVRMNVLAGNLANSQSVHGNPRGVFERRDVIFAAV 52 >gi|50120645|ref|YP_049812.1| flagellar hook-associated protein FlgK [Pectobacterium atrosepticum SCRI1043] gi|49611171|emb|CAG74617.1| flagellar hook-associated protein 1 [Pectobacterium atrosepticum SCRI1043] Length = 568 Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 13/74 (17%), Positives = 28/74 (37%), Gaps = 2/74 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA--IKNDIDQKISF 58 M N ++ + LSTV++N+SN G+ + + + I ++ Sbjct: 1 MSNLINTAMSGLKGAQIALSTVSNNISNQAVTGYSRQNAILEQAISSSTSAGYIGNGVNV 60 Query: 59 VASGKEYLSKEVGS 72 V+ ++Y Sbjct: 61 VSINRQYNEFITNQ 74 >gi|323697478|ref|ZP_08109390.1| flagellar hook-associated protein FlgK [Desulfovibrio sp. ND132] gi|323457410|gb|EGB13275.1| flagellar hook-associated protein FlgK [Desulfovibrio desulfuricans ND132] Length = 711 Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 24/239 (10%), Positives = 51/239 (21%), Gaps = 17/239 (7%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 LA L F F+ + +++ D A Sbjct: 483 IYNASTGLLASSAALD-------------FDGSGGTFNPEIHTLEDVRDAFNRTYAGAIN 529 Query: 65 YLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVL 124 + FA D + +++ Y Sbjct: 530 ATIVNNKLRLEAEDGYTFAFGTDTAGLYAGLGLNTFFKGDDANSMAINEKITSDLDYLAT 589 Query: 125 DMASVPIQIPQKDE----IFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 + ++ D + ++ T +D G V + + Sbjct: 590 GHVNGAGEMNTGDNTTALSMYALREVSVTTSTAFEGTTSQTILDYYNGIVGNVGTDTNRA 649 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + E S N EM +I + + LI ++ + + Sbjct: 650 QFNQNFYQTLANDLNDRQQEVSGVNLDEEMSDLIRYQASYTAAAKLITTADEMLQTILS 708 Score = 39.9 bits (91), Expect = 0.30, Method: Composition-based stats. Identities = 9/74 (12%), Positives = 25/74 (33%), Gaps = 2/74 (2%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE--VVGAIKNDIDQKISFVASGKEYLSK 68 A A + +L +N++N +T G+ V E + + + + + Sbjct: 15 ALFASQAQLQVTGENIANVNTEGYSRRSVNLEEGTYIDYSPGQLGTGVKATEVVRSFDEM 74 Query: 69 EVGSFISTGTELDF 82 ++ + + Sbjct: 75 VEAMYLQQSSLSNM 88 >gi|307720251|ref|YP_003891391.1| flagellar basal-body rod protein FlgC [Sulfurimonas autotrophica DSM 16294] gi|306978344|gb|ADN08379.1| flagellar basal-body rod protein FlgC [Sulfurimonas autotrophica DSM 16294] Length = 164 Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 8/45 (17%), Positives = 18/45 (40%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 G++ N N + EM ++ T+ + + + AI + Sbjct: 119 GYVAYPNINPVVEMSDLVEATRSYQANVAAFQSAKDMANSAISLL 163 Score = 39.5 bits (90), Expect = 0.37, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 6/49 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44 SF+I A R++T++ N++N T G +R +V F + Sbjct: 5 LNSFDISGYGLSAQRVRVNTISSNIANAQTTRTDEGGPYRRREVVFKAI 53 >gi|239995128|ref|ZP_04715652.1| flagellar basal-body rod protein FlgB [Alteromonas macleodii ATCC 27126] Length = 144 Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 11/89 (12%), Positives = 32/89 (35%), Gaps = 3/89 (3%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69 +A +R+ ++ N++N +T G++ + F++ + + + A+ Sbjct: 14 SALTIRTERMEVISGNLANANTPGYKARDIDFNKAMQSAMREAS---GGTANHASSGMVR 70 Query: 70 VGSFISTGTELDFALEGDAWFALESPRGI 98 +G A D + + + Sbjct: 71 TNDRHLSGNSTSVAANFDMQYRIPTQPDT 99 >gi|150020229|ref|YP_001305583.1| flagellar hook-associated protein FlgK [Thermosipho melanesiensis BI429] gi|149792750|gb|ABR30198.1| flagellar hook-associated protein FlgK [Thermosipho melanesiensis BI429] Length = 846 Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 21/57 (36%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 + N GL + ++ V+ N++N +T GF + + Q + Sbjct: 9 ALNTGLLGIYTSKLAMNVVSHNIANANTPGFSRQVPIIRTMPPIPATTLTQPSVPLQ 65 Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 7/39 (17%), Positives = 15/39 (38%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 + EM MI FN+ ++ ++ + I + Sbjct: 804 VSLDEEMANMIKFQHAFNASARVMTAVDEMIGRVIDKLG 842 >gi|75675326|ref|YP_317747.1| flagellar basal body rod protein FlgC [Nitrobacter winogradskyi Nb-255] gi|74420196|gb|ABA04395.1| Flagellar basal-body rod protein FlgC [Nitrobacter winogradskyi Nb-255] Length = 141 Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 9/58 (15%), Positives = 21/58 (36%) Query: 186 LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 E + G ++ N N + EM M + + + +I + + + + S Sbjct: 84 HEPGNPAADTSGNVKYPNVNPLVEMTDMRDAQRSYEANLNIISATRRMIQRTLDILKS 141 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 10/116 (8%), Positives = 33/116 (28%), Gaps = 11/116 (9%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKN---- 50 S +I + A R+ +++N++N ++ +R FS + + Sbjct: 9 MRSMSIATSGLRAQAGRMRVISENIANANSTAQAPGGDPYRRKVPTFSSALDRALDAKVV 68 Query: 51 DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106 + + ++ + + ++G + + Sbjct: 69 TLGRVRPDTSTFRIKHEPGNPAADTSGNVKYPNVNPLVEMTDMRDAQRSYEANLNI 124 >gi|78042758|ref|YP_359838.1| flagellar basal-body rod protein FlgC [Carboxydothermus hydrogenoformans Z-2901] gi|77994873|gb|ABB13772.1| flagellar basal-body rod protein FlgC [Carboxydothermus hydrogenoformans Z-2901] Length = 138 Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 10/67 (14%), Positives = 23/67 (34%), Gaps = 5/67 (7%) Query: 172 RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 + P P D + VK N N E+ ++ + + + T+ + + Sbjct: 73 TKTPYRYVFNPNHPDADPNTGLVK-----YPNVNINDEIVNLLAAQRAYEANVTVFNTAK 127 Query: 232 KSMLEAI 238 +A+ Sbjct: 128 AMYAKAL 134 Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 32/86 (37%), Gaps = 6/86 (6%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDIDQKI 56 +SF I +A A L T+ DN++N +T G + V F E++ A + Sbjct: 5 SSFQITASALTAHRLWLDTIVDNIANANTTRTPAGGTYNRKDVIFEEILEAKAGFKGGGV 64 Query: 57 SFVASGKEYLSKEVGSFISTGTELDF 82 ++ + F + D Sbjct: 65 RVSQIVEDTKTPYRYVFNPNHPDADP 90 >gi|95929883|ref|ZP_01312624.1| Flagellar hook-associated protein [Desulfuromonas acetoxidans DSM 684] gi|95134179|gb|EAT15837.1| Flagellar hook-associated protein [Desulfuromonas acetoxidans DSM 684] Length = 552 Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 8/49 (16%), Positives = 20/49 (40%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 + N G + A ++ + +N++N +T G+ V ++ Sbjct: 6 ALNTGKTSLFASQKSIEVAGNNIANVNTEGYSRQNVVLGDIPSLEFGGF 54 Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 7/36 (19%), Positives = 15/36 (41%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + EM +I + F + L+ ++ M+ I Sbjct: 514 VSIEEEMISLIKFQRGFEASAKLLSTVDELMVTVIN 549 >gi|239815254|ref|YP_002944164.1| flagellar basal-body rod protein FlgC [Variovorax paradoxus S110] gi|239801831|gb|ACS18898.1| flagellar basal-body rod protein FlgC [Variovorax paradoxus S110] Length = 153 Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 9/48 (18%), Positives = 23/48 (47%), Gaps = 1/48 (2%) Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G++ + ++ EM M+ T+ + + + ++ L A+ +I S Sbjct: 105 SGYVAYAAVDTATEMVSMMSATRAYEANVSAMNTARTLALRAL-DIGS 151 Score = 35.2 bits (79), Expect = 7.2, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 14/34 (41%), Gaps = 2/34 (5%) Query: 1 MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTV 32 M SF I R+ A N++N +TV Sbjct: 1 MDYTQSFAISAIGMNIERTRVDVAALNLANANTV 34 >gi|332994156|gb|AEF04211.1| flagellar hook-associated protein FlgK [Alteromonas sp. SN2] Length = 709 Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Query: 8 GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKF--SEVVGAIKNDIDQKISFVASGK 63 + A + L T ++N++N +T G+ + + S+V G + ++ I+ A + Sbjct: 10 ATSGVNASSKLLQTTSNNIANVNTPGYVRERTELVNSDVFGVEIGNTERIINVFAQNQ 67 >gi|296124187|ref|YP_003631965.1| flagellar basal-body rod protein FlgC [Planctomyces limnophilus DSM 3776] gi|296016527|gb|ADG69766.1| flagellar basal-body rod protein FlgC [Planctomyces limnophilus DSM 3776] Length = 137 Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 9/32 (28%), Positives = 18/32 (56%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32 M + +I + +A R+ T+A N++N +T Sbjct: 1 MFHTLDISTSGLIAQRTRMDTIAGNIANVNTT 32 Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 6/46 (13%), Positives = 18/46 (39%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G + N N + E + ++ + + T ++ + + R + Sbjct: 92 GKVLYPNINVVTEFVNAMEASRAYEANVTTMEVTKDMIQNTFRLLG 137 >gi|188586845|ref|YP_001918390.1| flagellar hook-associated protein FlgK [Natranaerobius thermophilus JW/NM-WN-LF] gi|179351532|gb|ACB85802.1| flagellar hook-associated protein FlgK [Natranaerobius thermophilus JW/NM-WN-LF] Length = 568 Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 7/41 (17%), Positives = 19/41 (46%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S + EM +M+ +N+ + ++ ++S+ I + Sbjct: 524 SGVSMDEEMTKMVQQQHAYNAASRVVTTIDESLDTIINQMG 564 Score = 35.2 bits (79), Expect = 7.0, Method: Composition-based stats. Identities = 13/90 (14%), Positives = 23/90 (25%), Gaps = 2/90 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 A A L T N++N + G+ K S Q + A Sbjct: 7 GMETAKRALFAQRNALDTTGHNIANAERDGYTRQKAHMSATSPYTM--PAQNMPGTAGQI 64 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALE 93 + +D + ++ F Sbjct: 65 GTGVEVESVERMRDDFIDSQIREESRFKGN 94 >gi|152989404|ref|YP_001349644.1| flagellar hook-associated protein FlgK [Pseudomonas aeruginosa PA7] gi|150964562|gb|ABR86587.1| flagellar hook-associated protein FlgK [Pseudomonas aeruginosa PA7] Length = 682 Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 10/52 (19%), Positives = 17/52 (32%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M +IGL+ + L+ N++N T G+ V Sbjct: 1 MSDLLSIGLSGLGTSQTWLTVTGHNITNVKTPGYSRQSAIQQTQVPQFSGAG 52 >gi|90415321|ref|ZP_01223255.1| flagellar basal-body rod protein FlgB [marine gamma proteobacterium HTCC2207] gi|90332644|gb|EAS47814.1| flagellar basal-body rod protein FlgB [marine gamma proteobacterium HTCC2207] Length = 128 Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 14/86 (16%), Positives = 30/86 (34%), Gaps = 4/86 (4%) Query: 1 MQTSFNIGLA----AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56 M F+ A +R+ ++ N++N DT GF+ + F V+ ++ + Sbjct: 1 MMKMFDAAFGIHEKALDLRAKRMEVLSQNIANADTPGFKARDIDFKNVLNNVQQAGSIRT 60 Query: 57 SFVASGKEYLSKEVGSFISTGTELDF 82 + A + S + Sbjct: 61 THAAHVSQASSAGADMVYTVPFGTSV 86 >gi|71278001|ref|YP_268219.1| flagellar basal-body rod protein FlgB [Colwellia psychrerythraea 34H] gi|71143741|gb|AAZ24214.1| flagellar basal-body rod protein FlgB [Colwellia psychrerythraea 34H] Length = 132 Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 16/108 (14%), Positives = 35/108 (32%), Gaps = 6/108 (5%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 F + L QR +A N++N DT G++ + F++ + N Sbjct: 6 DKGFQLHTQGMLIRSQRAEVIASNIANADTPGYKAKGLDFNQALAQAAN------KQKMG 59 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109 K +D+ + + + + + R+ K + Sbjct: 60 MSRTNDKHFDIRTELNNSVDYRVPNNPDTGDGNTVDVQVERNLYLKNS 107 >gi|312792644|ref|YP_004025567.1| flagellar basal-body rod protein flgb [Caldicellulosiruptor kristjanssonii 177R1B] gi|312179784|gb|ADQ39954.1| flagellar basal-body rod protein FlgB [Caldicellulosiruptor kristjanssonii 177R1B] Length = 133 Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 9/60 (15%), Positives = 21/60 (35%) Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76 +R +++N++N DT G++ + F + N + + S Sbjct: 20 KRNEIISNNIANADTPGYKVKDLNFEAFLQKSLNQEENLELVTTDERHIKESSSSQDNSI 79 >gi|88858146|ref|ZP_01132788.1| flagellar basal-body rod protein FlgB [Pseudoalteromonas tunicata D2] gi|88819763|gb|EAR29576.1| flagellar basal-body rod protein FlgB [Pseudoalteromonas tunicata D2] Length = 134 Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 34/75 (45%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 +F I A LA QR +A N++N DT G++ + F++ + + K+ ++S Sbjct: 6 DKAFGIHPNAMLARVQRAEVLASNIANADTPGYKAKDIDFAQALKSAKSAQSSQLSRTHE 65 Query: 62 GKEYLSKEVGSFIST 76 ++ IS Sbjct: 66 KHFSINTSSIDSISQ 80 >gi|121602485|ref|YP_989402.1| flagellar basal body rod protein FlgC [Bartonella bacilliformis KC583] gi|120614662|gb|ABM45263.1| flagellar basal-body rod protein FlgC [Bartonella bacilliformis KC583] Length = 137 Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 11/75 (14%), Positives = 23/75 (30%), Gaps = 7/75 (9%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQKISFV 59 + A RL +A+N++N ++ G +R V F + + + + Sbjct: 11 VSTTGLGAQSTRLRIIAENLANANSTGRAPGAAPYRRKTVSFETALNPYVDAQGVHVKRI 70 Query: 60 ASGKEYLSKEVGSFI 74 K Sbjct: 71 GVDKAPFIMRYEPGH 85 Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 20/42 (47%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G+++ N N++ EM M + + + +I + + + I Sbjct: 92 GYVKYPNVNAVIEMADMREANRSYEANLQVIRQVRDLVSQTI 133 >gi|315125981|ref|YP_004067984.1| LfgB [Pseudoalteromonas sp. SM9913] gi|315014495|gb|ADT67833.1| LfgB [Pseudoalteromonas sp. SM9913] Length = 124 Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 15/94 (15%), Positives = 36/94 (38%), Gaps = 3/94 (3%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 + R +A N++N DT GF++ V + +++ ++ + Q +G + + Sbjct: 14 SMKLRLDRAEIIASNLANVDTPGFKSRDVDYRQIMQSVSSSFSQNRDVDFAGVQTDELKY 73 Query: 71 GSFIS---TGTELDFALEGDAWFALESPRGIILT 101 G ++ +E + + LT Sbjct: 74 RVPYQPSSDGNTVELNIEQAKFASNSMDFQTSLT 107 >gi|157959896|ref|YP_001499930.1| flagellar hook-associated protein FlgK [Shewanella pealeana ATCC 700345] gi|157844896|gb|ABV85395.1| flagellar hook-associated protein FlgK [Shewanella pealeana ATCC 700345] Length = 457 Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 7/41 (17%), Positives = 15/41 (36%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 S N E +I Q + + +I ++ + +I Sbjct: 417 TSGVNMDEEGVNLIIYQQSYQANAKVISTADQLFQTILNSI 457 Score = 44.5 bits (103), Expect = 0.013, Method: Composition-based stats. Identities = 13/77 (16%), Positives = 26/77 (33%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + NIG++ A L+ ++N+SN G+ +V S V + Sbjct: 1 MSMLNIGMSGLNASMAALTATSNNVSNAMVPGYSRQQVVMSSVGNGTYGSGSGVMVDGVR 60 Query: 62 GKEYLSKEVGSFISTGT 78 + + +T Sbjct: 61 RISDQYQVTQQWNATSN 77 >gi|315649834|ref|ZP_07902917.1| flagellar hook-associated protein FlgK [Paenibacillus vortex V453] gi|315274808|gb|EFU38189.1| flagellar hook-associated protein FlgK [Paenibacillus vortex V453] Length = 552 Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 22/199 (11%), Positives = 64/199 (32%), Gaps = 10/199 (5%) Query: 51 DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-----ILTRDGR 105 D + K + G T + A G +F + I L+++ + Sbjct: 318 DANNPRKLAVDTKHTVDGLNGLHKLGYTLNEPATTGSDFFVSANGGPITAGNMRLSQNIQ 377 Query: 106 FKVTDDGSLV-SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 + + G+ + + P + V ++ + G + + + Sbjct: 378 SDLKNIGASLRTEMKTNPDGTTSEVVLKGNGGMALLIAGLSERTFSFNPNNSNGAVTDIT 437 Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGF----LEDSNANSMYEMGQMIHLTQKF 220 +G+++ S + + +G + L S+ + EM +I + Sbjct: 438 NFEGYLQSVISKLGTDSSNAIKMVENGTLLVEHADTLRLSISSVSLDEEMSDLIRFQHAY 497 Query: 221 NSITTLIDENEKSMLEAIR 239 ++ + ++ ++ + + I Sbjct: 498 SASSRVVTTIDEMLDKLIN 516 Score = 38.7 bits (88), Expect = 0.77, Method: Composition-based stats. Identities = 8/35 (22%), Positives = 16/35 (45%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39 IG +A + ++T N++N +T G+ Sbjct: 8 LEIGKRGLIAQQAAINTAGHNVTNANTPGYSRQTT 42 >gi|264676576|ref|YP_003276482.1| flagellar hook-associated protein FlgK [Comamonas testosteroni CNB-2] gi|262207088|gb|ACY31186.1| flagellar hook-associated protein FlgK [Comamonas testosteroni CNB-2] Length = 643 Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 19/45 (42%) Query: 8 GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 G A +A + L T N++N +T G+ V F G + Sbjct: 2 GARALMANQIALQTTGHNIANVNTAGYSRQSVAFQTSAGQNIGNG 46 Score = 35.2 bits (79), Expect = 8.0, Method: Composition-based stats. Identities = 5/41 (12%), Positives = 15/41 (36%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E +++ Q + + ++ + I+ + Sbjct: 602 SGVNLDEEAAKLLQYQQSYQASAKMLQVAQGIFDSVIQAVG 642 >gi|148558590|ref|YP_001257211.1| flagellar basal body rod protein FlgC [Brucella ovis ATCC 25840] gi|148369875|gb|ABQ62747.1| flagellar basal-body rod protein FlgC [Brucella ovis ATCC 25840] Length = 140 Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 8/47 (17%), Positives = 21/47 (44%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G+++ N N + EM M + + + ++ + + + I + S Sbjct: 93 GYVKYPNVNMVVEMADMREANRSYEANLQVVRQARELISMTIDLLRS 139 Score = 44.1 bits (102), Expect = 0.015, Method: Composition-based stats. Identities = 12/106 (11%), Positives = 31/106 (29%), Gaps = 8/106 (7%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQ 54 Q++ I + RL V++N++N + +R V F + + Sbjct: 7 QSTLKIAASGLSVQSTRLRIVSENIANAQSTARTADTDPYRRKTVSFRAELEQGTGAAEV 66 Query: 55 KISFVA-SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 +++ V ++ + S + + Sbjct: 67 RVAEVGKDTSPFIEQYDPSHPAADARGYVKYPNVNMVVEMADMREA 112 >gi|70729010|ref|YP_258744.1| flagellar hook-associated protein FlgK [Pseudomonas fluorescens Pf-5] gi|68343309|gb|AAY90915.1| flagellar hook-associated protein FlgK [Pseudomonas fluorescens Pf-5] Length = 683 Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 11/39 (28%), Positives = 20/39 (51%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 + NIG++ A + L T +N++N DT G+ + Sbjct: 1 MSLLNIGMSGLAASQTSLMTTGNNIANADTAGYSRQQTV 39 >gi|85715030|ref|ZP_01046015.1| hypothetical protein NB311A_11677 [Nitrobacter sp. Nb-311A] gi|85698227|gb|EAQ36099.1| hypothetical protein NB311A_11677 [Nitrobacter sp. Nb-311A] Length = 620 Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 12/77 (15%), Positives = 33/77 (42%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 ++ +I ++ A + LS V+ N++N +T G+ + ++V + I + Sbjct: 5 SALSIAMSGLRANQAALSIVSGNVANANTPGYVAQTLVQDQIVTGSTGSGVRIIGVSRTL 64 Query: 63 KEYLSKEVGSFISTGTE 79 Y+ ++ + + Sbjct: 65 DAYVQSQLRTENAGSAY 81 Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 13/93 (13%), Positives = 33/93 (35%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANS 206 + G A Q FV ++ + +++ T+++ F ++ N Sbjct: 527 PNTGLGAAAAPFQGTLPSFLQQFVSLQSGAATTAKQVAQGQEIVVNTLQKKFDAEAGVNM 586 Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 EM +I L + + ++ + M ++ Sbjct: 587 DTEMANLIALQNSYAANAHVMTVVQSMMQTLLQ 619 >gi|317052131|ref|YP_004113247.1| flagellar hook-associated protein FlgK [Desulfurispirillum indicum S5] gi|316947215|gb|ADU66691.1| flagellar hook-associated protein FlgK [Desulfurispirillum indicum S5] Length = 569 Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 6/41 (14%), Positives = 16/41 (39%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E+ M+ + F + + I ++ + + + Sbjct: 528 SGVNENEELTNMLKFQRSFEASSRFITTIDRLLDNIVNRMG 568 Score = 44.9 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 16/41 (39%), Positives = 22/41 (53%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 S N+GL+ LA + L TV N+SN +T GF +V Sbjct: 5 QSLNVGLSGVLASQSALMTVGHNLSNMNTEGFSRQRVVLQA 45 >gi|154253013|ref|YP_001413837.1| flagellar basal body rod protein FlgC [Parvibaculum lavamentivorans DS-1] gi|154156963|gb|ABS64180.1| flagellar basal-body rod protein FlgC [Parvibaculum lavamentivorans DS-1] Length = 139 Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 14/106 (13%), Positives = 30/106 (28%), Gaps = 8/106 (7%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSE-VVGAIKNDID 53 S + + A R+ +A+N++N D+ +R V F + + I + Sbjct: 7 IKSMMVAASGLKAQSGRMRVIAENIANADSTSRVAGGDPYRRKIVTFEDKLNREIGANTV 66 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 V E+ K + + + Sbjct: 67 SLGRPVLDKTEFQLKYMPGHPAADEAGYVKMPNVNGMVEAMDMREA 112 Score = 44.1 bits (102), Expect = 0.018, Method: Composition-based stats. Identities = 9/46 (19%), Positives = 20/46 (43%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G+++ N N M E M + + + LI + + + + I + Sbjct: 93 GYVKMPNVNGMVEAMDMREAQRSYEANLNLIQASRRMISQTIDILR 138 >gi|28211332|ref|NP_782276.1| flagellar basal body rod protein FlgC [Clostridium tetani E88] gi|28203772|gb|AAO36213.1| flagellar basal-body rod protein flgC [Clostridium tetani E88] Length = 143 Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 9/46 (19%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G++ N N++ E+ +I T+ + + I+ ++ ++A+ I Sbjct: 98 GYVLMPNVNALNEVADLIAATRSYEANVDAINSSKSMFMKAL-EIG 142 Score = 40.2 bits (92), Expect = 0.23, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 24/65 (36%), Gaps = 6/65 (9%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSEVVGAIKNDIDQ 54 M + I + A R+ T+A N+ N+ T G +R F E + N Sbjct: 3 MFNNMRISASGLSAERLRIDTIASNIVNSRSTRGKNGEPYRRKVAIFQENLTKEINKQTG 62 Query: 55 KISFV 59 K V Sbjct: 63 KREEV 67 >gi|319898635|ref|YP_004158728.1| flagellar basal-body rod protein flgC [Bartonella clarridgeiae 73] gi|319402599|emb|CBI76144.1| Flagellar basal-body rod protein flgC [Bartonella clarridgeiae 73] Length = 138 Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 11/75 (14%), Positives = 25/75 (33%), Gaps = 7/75 (9%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQKISFV 59 I A RL +A+N++N ++ G ++ V F + + + + Sbjct: 11 IATTGLSAQSTRLRIIAENLANANSTGKSAGARPYQRKTVSFEATLNPYIDAQGVHVKRI 70 Query: 60 ASGKEYLSKEVGSFI 74 ++ K Sbjct: 71 STDKAPFIMRYEPGH 85 Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 20/42 (47%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G+++ N NS+ EM M + + + +I + + + I Sbjct: 92 GYVKYPNVNSIIEMADMREANRSYEANLQVIRQARDLVSQTI 133 >gi|77165840|ref|YP_344365.1| flagellar basal-body rod protein FlgC [Nitrosococcus oceani ATCC 19707] gi|254433209|ref|ZP_05046717.1| flagellar basal-body rod protein FlgC [Nitrosococcus oceani AFC27] gi|76884154|gb|ABA58835.1| Flagellar basal-body rod protein FlgC [Nitrosococcus oceani ATCC 19707] gi|207089542|gb|EDZ66813.1| flagellar basal-body rod protein FlgC [Nitrosococcus oceani AFC27] Length = 137 Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 24/43 (55%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N NS+ EM MI ++ + + + + +++ +L ++ Sbjct: 92 GYIFHPNVNSIEEMANMISASRNYENNVEMANTSKQLLLRTLQ 134 Score = 39.1 bits (89), Expect = 0.59, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 31/87 (35%), Gaps = 6/87 (6%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56 F+I A A RL+T A N++N D+V +R + F+ ++ + Sbjct: 5 KVFDIAGTAMSAQTLRLNTTASNLANADSVSSSIDQTYRARQPVFATLLDKFNPEAPAGG 64 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFA 83 V E + + + A Sbjct: 65 VQVLGVVESGAPLQQEYAPDHPMANEA 91 >gi|218289685|ref|ZP_03493893.1| flagellar hook-associated protein FlgK [Alicyclobacillus acidocaldarius LAA1] gi|218240142|gb|EED07326.1| flagellar hook-associated protein FlgK [Alicyclobacillus acidocaldarius LAA1] Length = 487 Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 28/202 (13%), Positives = 55/202 (27%), Gaps = 9/202 (4%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 IGL+ A+++ S V +N+ N +T G+ E V ++ + Sbjct: 9 LYIGLSGLQAMQEAESVVGNNIDNANTPGY------AQESVNLVEGHPYPPVPGDGPMIG 62 Query: 65 YLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVL 124 + S S + + + W +S + T +S Sbjct: 63 GQYGQGVSVQSVTRQDSWFYDRQDW-QNQSTYQMYSTYSSILTQVQGILSEPSSNGIQSA 121 Query: 125 DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT 184 + N + + +G+V+A Q S I+ Sbjct: 122 LDQFFSAWQTLSTDPSNTAARQAVITQGQVLAQTANTVTSQLQTLQSNVLSQINDQFQEL 181 Query: 185 PLEDLSGVTVKRG--FLEDSNA 204 V+ + SN Sbjct: 182 EQYAQELSAVQAQIAAISQSNV 203 >gi|242278628|ref|YP_002990757.1| flagellar basal-body rod protein FlgC [Desulfovibrio salexigens DSM 2638] gi|242121522|gb|ACS79218.1| flagellar basal-body rod protein FlgC [Desulfovibrio salexigens DSM 2638] Length = 147 Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G + + N + EM MI +++ + + +D ++ A+R Sbjct: 100 GIVRYPDINVVEEMVNMITISRSYEANAQAVDSAKRMFNRALR 142 Score = 39.9 bits (91), Expect = 0.32, Method: Composition-based stats. Identities = 15/123 (12%), Positives = 36/123 (29%), Gaps = 15/123 (12%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVK---------FSEVVGAI 48 + +IG + A + L+ V+ NM+N T G +R V F + Sbjct: 6 ALDIGASGLKAQREYLNVVSMNMANAKTTRTAEGGPYRRKSVSMESSPVLSPFETAMNQQ 65 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 N + ++ + + + + + ++T ++ Sbjct: 66 LNQQLRGVTVRGIVSDTRPFKEVYEPNHPDADKKGIVRYPDINVVEEMVNMITISRSYEA 125 Query: 109 TDD 111 Sbjct: 126 NAQ 128 >gi|182680550|ref|YP_001834696.1| flagellar basal body rod protein FlgC [Beijerinckia indica subsp. indica ATCC 9039] gi|182636433|gb|ACB97207.1| flagellar basal-body rod protein FlgC [Beijerinckia indica subsp. indica ATCC 9039] Length = 138 Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 13/98 (13%), Positives = 31/98 (31%) Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNAN 205 G + K + V+ ++ G + + +GF++ N N Sbjct: 41 GANPYQRKTVTFSSEMDRLSGLDLVQIKSIGKDTTPFQREHDPGNPAADDKGFVKRPNVN 100 Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 + EM M + + + ++ + I + S Sbjct: 101 ILIEMADMREANRSYEANLQVLKQARDLSTMTIDLLRS 138 Score = 41.4 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 24/54 (44%), Gaps = 7/54 (12%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKN 50 S I + A RL +++NM+N+++ G ++ V FS + + Sbjct: 8 SMKIAGSGLEAQSTRLRVISENMANSESTGTTAGANPYQRKTVTFSSEMDRLSG 61 >gi|329928727|ref|ZP_08282576.1| flagellar hook-associated protein FlgK [Paenibacillus sp. HGF5] gi|328937508|gb|EGG33926.1| flagellar hook-associated protein FlgK [Paenibacillus sp. HGF5] Length = 523 Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 22/199 (11%), Positives = 63/199 (31%), Gaps = 10/199 (5%) Query: 51 DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI-----ILTRDGR 105 D + K + G T + A G +F + I L++ + Sbjct: 318 DANNPRKLAEDTKHTVDGLNGLHKLGYTLNEPATTGGDFFVSANGGPITAGNMRLSQTIQ 377 Query: 106 FKVTDDGSLV-SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVD 164 + + G+ + + P + V ++ + G + + + Sbjct: 378 SDLKNIGASLRTEMKTNPDGTTSEVVLKGNGGMALLIAGLSERTFSFNPNNSNGAVTDIT 437 Query: 165 MSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGF----LEDSNANSMYEMGQMIHLTQKF 220 +G+++ S + + +G + L S+ + EM +I + Sbjct: 438 NFEGYLQSVISKLGTDSSNAIKMVENGTLLVEHADTLRLSISSVSLDEEMSDLIRFQHAY 497 Query: 221 NSITTLIDENEKSMLEAIR 239 ++ + ++ ++ + + I Sbjct: 498 SASSRVVTTIDEMLDKLIN 516 Score = 39.5 bits (90), Expect = 0.38, Method: Composition-based stats. Identities = 9/35 (25%), Positives = 16/35 (45%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39 IG +A + L+T N++N +T G+ Sbjct: 8 LEIGKRGLIAQQAALNTAGHNVTNANTPGYSRQTT 42 >gi|306846280|ref|ZP_07478841.1| flagellar basal-body rod protein FlgC [Brucella sp. BO1] gi|306273275|gb|EFM55144.1| flagellar basal-body rod protein FlgC [Brucella sp. BO1] Length = 140 Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 8/47 (17%), Positives = 21/47 (44%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G+++ N N + EM M + + + ++ + + + I + S Sbjct: 93 GYVKYPNVNMVVEMADMREANRSYEANLQVVRQARELISMTIDLLRS 139 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 12/106 (11%), Positives = 32/106 (30%), Gaps = 8/106 (7%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQ 54 Q++ I + A RL +++N++N + +R V F + + Sbjct: 7 QSTLKIAASGLSAQSTRLRIISENIANAQSTARTADADPYRRKTVSFRTELEQGTGAAEV 66 Query: 55 KISFVA-SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 +++ V ++ + S + + Sbjct: 67 RVAEVGKDTSPFIEQYDPSHPAADARGYVKYPNVNMVVEMADMREA 112 >gi|297531376|ref|YP_003672651.1| flagellar hook-associated protein FlgK [Geobacillus sp. C56-T3] gi|297254628|gb|ADI28074.1| flagellar hook-associated protein FlgK [Geobacillus sp. C56-T3] Length = 531 Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 8/41 (19%), Positives = 17/41 (41%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S+ + EM MI +N+ I ++ + + I + Sbjct: 487 SSVSLDEEMMNMIKYQHAYNAAARQITVIDEMLDKLINGMG 527 Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 10/45 (22%), Positives = 22/45 (48%), Gaps = 3/45 (6%) Query: 1 MQTSFN---IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS 42 M ++F+ +A + L T + N++N +T G+ +V+ Sbjct: 1 MLSTFHGLEAARRGMMAQQAALYTTSHNIANANTEGYTRQRVQLR 45 >gi|239996708|ref|ZP_04717232.1| Flagellar hook-associated protein [Alteromonas macleodii ATCC 27126] Length = 680 Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 20/179 (11%), Positives = 54/179 (30%), Gaps = 1/179 (0%) Query: 8 GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS-EVVGAIKNDIDQKISFVASGKEYL 66 + A + L T ++N++N +T G+ + + V ++ ++I V + + Sbjct: 10 ATSGVNASSKLLQTTSNNIANVNTPGYVRERTELQNSQVFGVEIGNTERIINVFAQNQLR 69 Query: 67 SKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDM 126 A + + + L+ T + + + VL Sbjct: 70 RDITSVGELEAFSSKTAAIDNLLASEANSISQGLSEYFAALQTAADDPTNLASRDQVLGK 129 Query: 127 ASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185 + Q + + + ++ E++ + + + R N P Sbjct: 130 SESLYQRMKTLSDYMLEKEEELNLEFTSMVNRANTLIGNIGDLNRNIVIANGNNTSDQP 188 >gi|23016696|ref|ZP_00056449.1| COG1256: Flagellar hook-associated protein [Magnetospirillum magnetotacticum MS-1] Length = 858 Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 33/79 (41%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 N ++ L ++ L ++ N+ N +T G+ ++ V A Q+ + + Sbjct: 6 GLNTAVSGLLTNQKGLDVISQNVVNVNTKGYVRKQMTPESRVVAGVGAGVQQGALTRNVD 65 Query: 64 EYLSKEVGSFISTGTELDF 82 E L +++ ST LD Sbjct: 66 EGLMRDIRRQTSTQGALDV 84 Score = 44.5 bits (103), Expect = 0.013, Method: Composition-based stats. Identities = 16/139 (11%), Positives = 36/139 (25%), Gaps = 12/139 (8%) Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 +R +D G + G + G + A++ Sbjct: 729 SRGAMQYNSDLGKYYLSEGDNTTALALGAAMSTKTNMATAGSLYAGSYNFAEHAAASIAQ 788 Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 S D + R++ S N E+ MI+ Q + Sbjct: 789 VSTDAAHSKDRQDYQTTLGQALDKQYAS------------TSGVNLDEEVANMINFQQAY 836 Query: 221 NSITTLIDENEKSMLEAIR 239 ++ +I ++ + + Sbjct: 837 SASAKVISTLQEMLDVLVN 855 >gi|254720612|ref|ZP_05182423.1| flagellar basal body rod protein FlgC [Brucella sp. 83/13] gi|265985652|ref|ZP_06098387.1| flagellar basal-body rod protein FlgC [Brucella sp. 83/13] gi|306838574|ref|ZP_07471411.1| flagellar basal-body rod protein FlgC [Brucella sp. NF 2653] gi|264664244|gb|EEZ34505.1| flagellar basal-body rod protein FlgC [Brucella sp. 83/13] gi|306406360|gb|EFM62602.1| flagellar basal-body rod protein FlgC [Brucella sp. NF 2653] Length = 140 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 8/47 (17%), Positives = 21/47 (44%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G+++ N N + EM M + + + ++ + + + I + S Sbjct: 93 GYVKYPNVNMVVEMADMREANRSYEANLQVVRQARELISMTIDLLRS 139 Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 13/106 (12%), Positives = 32/106 (30%), Gaps = 8/106 (7%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQ 54 Q++ I + A RL V++N++N + +R V F + + Sbjct: 7 QSTLKIAASGLSAQSTRLRIVSENIANAQSTARTADADPYRRKTVSFRTELEQGTGAAEV 66 Query: 55 KISFVA-SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 +++ V ++ + S + + Sbjct: 67 RVAEVGKDTSPFIEQYDPSHPAADARGYVKYPNVNMVVEMADMREA 112 >gi|319409189|emb|CBI82833.1| Flagellar basal-body rod protein flgC [Bartonella schoenbuchensis R1] Length = 137 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 11/75 (14%), Positives = 26/75 (34%), Gaps = 7/75 (9%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQKISFV 59 + A RL +A+N++N ++ G +R V F + + +++ + Sbjct: 11 VATTGLSAQSMRLRIIAENLANANSTGKSPGASPYRRKTVSFEAALNPHSDAQGVQVTRI 70 Query: 60 ASGKEYLSKEVGSFI 74 + K Sbjct: 71 GNDKAPFIMRYEPGH 85 Score = 43.3 bits (100), Expect = 0.033, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 20/42 (47%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G+++ N NS+ EM M + + + ++ + + + I Sbjct: 92 GYVKYPNVNSIVEMADMREANRSYEANLQVVRQVRDLVSQTI 133 >gi|316932834|ref|YP_004107816.1| flagellar basal-body rod protein FlgC [Rhodopseudomonas palustris DX-1] gi|315600548|gb|ADU43083.1| flagellar basal-body rod protein FlgC [Rhodopseudomonas palustris DX-1] Length = 141 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 7/47 (14%), Positives = 19/47 (40%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G ++ N N + EM M + + + +I + + + + + Sbjct: 95 GNVKYPNVNPVIEMTDMRDAQRSYEANLNVISATRRMIQRTLDILKA 141 Score = 43.7 bits (101), Expect = 0.023, Method: Composition-based stats. Identities = 10/59 (16%), Positives = 22/59 (37%), Gaps = 9/59 (15%) Query: 1 MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKN 50 M S I + A R+ +++N++N D+ +R F+ + + Sbjct: 6 MDFSRSMAIATSGLRAQAGRMRVISENIANADSTAQTAGGDPYRRKVPTFTSALDRSLD 64 >gi|254418692|ref|ZP_05032416.1| flagellar hook-associated protein FlgK [Brevundimonas sp. BAL3] gi|196184869|gb|EDX79845.1| flagellar hook-associated protein FlgK [Brevundimonas sp. BAL3] Length = 705 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 10/50 (20%), Positives = 19/50 (38%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 + NI + + +L +DN++N T G+ V + V Sbjct: 5 SIMNIATSGLQTAQAQLRVTSDNIANVHTPGYVRKTVDQTAAVTQGYGAG 54 Score = 41.0 bits (94), Expect = 0.14, Method: Composition-based stats. Identities = 8/35 (22%), Positives = 13/35 (37%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 N E+ M Q +N+ LI ++ I Sbjct: 667 VNMDEELVNMTTFQQAYNASARLIQASKDMYDTLI 701 >gi|17989433|ref|NP_542066.1| flagellar basal body rod protein FlgC [Brucella melitensis bv. 1 str. 16M] gi|62317101|ref|YP_222954.1| flagellar basal body rod protein FlgC [Brucella abortus bv. 1 str. 9-941] gi|83269093|ref|YP_418384.1| flagellar basal body rod protein FlgC [Brucella melitensis biovar Abortus 2308] gi|163844344|ref|YP_001621999.1| flagellar basal body rod protein FlgC [Brucella suis ATCC 23445] gi|189022366|ref|YP_001932107.1| flagellar basal body rod protein FlgC [Brucella abortus S19] gi|225628623|ref|ZP_03786657.1| flagellar basal-body rod protein FlgC [Brucella ceti str. Cudo] gi|225686010|ref|YP_002733982.1| flagellar basal body rod protein FlgC [Brucella melitensis ATCC 23457] gi|237816663|ref|ZP_04595655.1| flagellar basal-body rod protein FlgC [Brucella abortus str. 2308 A] gi|254691414|ref|ZP_05154668.1| flagellar basal body rod protein FlgC [Brucella abortus bv. 6 str. 870] gi|254695288|ref|ZP_05157116.1| flagellar basal body rod protein FlgC [Brucella abortus bv. 3 str. Tulya] gi|254698386|ref|ZP_05160214.1| flagellar basal body rod protein FlgC [Brucella abortus bv. 2 str. 86/8/59] gi|254699459|ref|ZP_05161287.1| flagellar basal body rod protein FlgC [Brucella suis bv. 5 str. 513] gi|254706294|ref|ZP_05168122.1| flagellar basal body rod protein FlgC [Brucella pinnipedialis M163/99/10] gi|254711412|ref|ZP_05173223.1| flagellar basal body rod protein FlgC [Brucella pinnipedialis B2/94] gi|254712011|ref|ZP_05173822.1| flagellar basal body rod protein FlgC [Brucella ceti M644/93/1] gi|254715080|ref|ZP_05176891.1| flagellar basal body rod protein FlgC [Brucella ceti M13/05/1] gi|256014940|ref|YP_003104949.1| flagellar basal body rod protein [Brucella microti CCM 4915] gi|256029958|ref|ZP_05443572.1| flagellar basal body rod protein FlgC [Brucella pinnipedialis M292/94/1] gi|256043071|ref|ZP_05446015.1| flagellar basal body rod protein FlgC [Brucella melitensis bv. 1 str. Rev.1] gi|256059610|ref|ZP_05449808.1| flagellar basal body rod protein FlgC [Brucella neotomae 5K33] gi|256111945|ref|ZP_05452896.1| flagellar basal body rod protein FlgC [Brucella melitensis bv. 3 str. Ether] gi|256252926|ref|ZP_05458462.1| flagellar basal body rod protein FlgC [Brucella ceti B1/94] gi|256256600|ref|ZP_05462136.1| flagellar basal body rod protein FlgC [Brucella abortus bv. 9 str. C68] gi|256262867|ref|ZP_05465399.1| flagellar basal body rod protein [Brucella melitensis bv. 2 str. 63/9] gi|260544339|ref|ZP_05820160.1| flagellar basal body rod protein [Brucella abortus NCTC 8038] gi|260564301|ref|ZP_05834786.1| flagellar basal body rod protein [Brucella melitensis bv. 1 str. 16M] gi|260757028|ref|ZP_05869376.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 6 str. 870] gi|260762844|ref|ZP_05875176.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 2 str. 86/8/59] gi|260882838|ref|ZP_05894452.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 9 str. C68] gi|261215657|ref|ZP_05929938.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 3 str. Tulya] gi|261216790|ref|ZP_05931071.1| flagellar basal-body rod protein FlgC [Brucella ceti M13/05/1] gi|261220017|ref|ZP_05934298.1| flagellar basal-body rod protein FlgC [Brucella ceti B1/94] gi|261313738|ref|ZP_05952935.1| flagellar basal-body rod protein FlgC [Brucella pinnipedialis M163/99/10] gi|261319020|ref|ZP_05958217.1| flagellar basal-body rod protein FlgC [Brucella pinnipedialis B2/94] gi|261319657|ref|ZP_05958854.1| flagellar basal-body rod protein FlgC [Brucella ceti M644/93/1] gi|261323579|ref|ZP_05962776.1| flagellar basal-body rod protein FlgC [Brucella neotomae 5K33] gi|261749910|ref|ZP_05993619.1| flagellar basal-body rod protein FlgC [Brucella suis bv. 5 str. 513] gi|265986977|ref|ZP_06099534.1| flagellar basal-body rod protein FlgC [Brucella pinnipedialis M292/94/1] gi|265989509|ref|ZP_06102066.1| flagellar basal-body rod protein FlgC [Brucella melitensis bv. 1 str. Rev.1] gi|265993392|ref|ZP_06105949.1| flagellar basal-body rod protein FlgC [Brucella melitensis bv. 3 str. Ether] gi|294853173|ref|ZP_06793845.1| flagellar basal-body rod protein FlgC [Brucella sp. NVSL 07-0026] gi|297249956|ref|ZP_06933657.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 5 str. B3196] gi|17985310|gb|AAL54330.1| flagellar basal-body rod protein flgc [Brucella melitensis bv. 1 str. 16M] gi|62197294|gb|AAX75593.1| FlgC, flagellar basal-body rod rotein FlgC [Brucella abortus bv. 1 str. 9-941] gi|82939367|emb|CAJ12315.1| Flagellar basal body rod protein:Flagellar basal-body rod protein FlgC [Brucella melitensis biovar Abortus 2308] gi|163675067|gb|ABY39177.1| flagellar basal-body rod protein FlgC [Brucella suis ATCC 23445] gi|189020940|gb|ACD73661.1| Flagellar basal body rod protein [Brucella abortus S19] gi|225616469|gb|EEH13517.1| flagellar basal-body rod protein FlgC [Brucella ceti str. Cudo] gi|225642115|gb|ACO02028.1| flagellar basal-body rod protein FlgC [Brucella melitensis ATCC 23457] gi|237787476|gb|EEP61692.1| flagellar basal-body rod protein FlgC [Brucella abortus str. 2308 A] gi|255997600|gb|ACU49287.1| flagellar basal body rod protein [Brucella microti CCM 4915] gi|260097610|gb|EEW81484.1| flagellar basal body rod protein [Brucella abortus NCTC 8038] gi|260151944|gb|EEW87037.1| flagellar basal body rod protein [Brucella melitensis bv. 1 str. 16M] gi|260673265|gb|EEX60086.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 2 str. 86/8/59] gi|260677136|gb|EEX63957.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 6 str. 870] gi|260872366|gb|EEX79435.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 9 str. C68] gi|260917264|gb|EEX84125.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 3 str. Tulya] gi|260918601|gb|EEX85254.1| flagellar basal-body rod protein FlgC [Brucella ceti B1/94] gi|260921879|gb|EEX88447.1| flagellar basal-body rod protein FlgC [Brucella ceti M13/05/1] gi|261292347|gb|EEX95843.1| flagellar basal-body rod protein FlgC [Brucella ceti M644/93/1] gi|261298243|gb|EEY01740.1| flagellar basal-body rod protein FlgC [Brucella pinnipedialis B2/94] gi|261299559|gb|EEY03056.1| flagellar basal-body rod protein FlgC [Brucella neotomae 5K33] gi|261302764|gb|EEY06261.1| flagellar basal-body rod protein FlgC [Brucella pinnipedialis M163/99/10] gi|261739663|gb|EEY27589.1| flagellar basal-body rod protein FlgC [Brucella suis bv. 5 str. 513] gi|262764262|gb|EEZ10294.1| flagellar basal-body rod protein FlgC [Brucella melitensis bv. 3 str. Ether] gi|263000178|gb|EEZ12868.1| flagellar basal-body rod protein FlgC [Brucella melitensis bv. 1 str. Rev.1] gi|263092702|gb|EEZ16911.1| flagellar basal body rod protein [Brucella melitensis bv. 2 str. 63/9] gi|264659174|gb|EEZ29435.1| flagellar basal-body rod protein FlgC [Brucella pinnipedialis M292/94/1] gi|294818828|gb|EFG35828.1| flagellar basal-body rod protein FlgC [Brucella sp. NVSL 07-0026] gi|297173825|gb|EFH33189.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 5 str. B3196] gi|326410333|gb|ADZ67397.1| flagellar basal body rod protein FlgC [Brucella melitensis M28] gi|326553625|gb|ADZ88264.1| flagellar basal body rod protein FlgC [Brucella melitensis M5-90] Length = 140 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 8/47 (17%), Positives = 21/47 (44%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G+++ N N + EM M + + + ++ + + + I + S Sbjct: 93 GYVKYPNVNMVVEMADMREANRSYEANLQVVRQARELISMTIDLLRS 139 Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 13/106 (12%), Positives = 32/106 (30%), Gaps = 8/106 (7%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQ 54 Q++ I + A RL V++N++N + +R V F + + Sbjct: 7 QSTLKIAASGLSAQSTRLRIVSENIANAQSTARTADTDPYRRKTVSFRTELEQGTGAAEV 66 Query: 55 KISFVA-SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 +++ V ++ + S + + Sbjct: 67 RVAEVGKDTSPFIEQYDPSHPAADARGYVKYPNVNMVVEMADMREA 112 >gi|220932550|ref|YP_002509458.1| flagellar hook-associated protein FlgK [Halothermothrix orenii H 168] gi|219993860|gb|ACL70463.1| flagellar hook-associated protein FlgK [Halothermothrix orenii H 168] Length = 471 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 8/38 (21%), Positives = 17/38 (44%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S + EM MI Q +N+ ++ + ++ + I Sbjct: 431 SGVSLDEEMANMIKFQQAYNAAAKMVSKVDEMLNTLIN 468 Score = 41.4 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 6/30 (20%), Positives = 13/30 (43%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 A ++ L N++N +T G+ + Sbjct: 13 ALQVQKKSLDVTGHNIANANTEGYSRQRAV 42 >gi|222148673|ref|YP_002549630.1| flagellar hook protein [Agrobacterium vitis S4] gi|221735659|gb|ACM36622.1| flagellar hook protein [Agrobacterium vitis S4] Length = 108 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 15/96 (15%), Positives = 31/96 (32%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 N + LA + RL+ +A N++N DT G++ + S + + A+ Sbjct: 7 LNSATSGMLAQQTRLTNIASNIANADTPGYQRLNTTLSASGSGVAATTTRSTDAPATQDT 66 Query: 65 YLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL 100 + + F + +L Sbjct: 67 SNVDPLREITDMIGAENGLAANAKVFETGADMWDML 102 >gi|294013083|ref|YP_003546543.1| flagellar basal-body rod protein FlgB [Sphingobium japonicum UT26S] gi|292676413|dbj|BAI97931.1| flagellar basal-body rod protein FlgB [Sphingobium japonicum UT26S] Length = 122 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 22/51 (43%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 A QRLS +A N++N T G++ + F + + + V+ Sbjct: 14 ALALRSQRLSLLASNIANASTPGYKARDIDFESALKEATTRQGKSPADVSQ 64 >gi|308175273|ref|YP_003921978.1| flagellar hook-filament junction [Bacillus amyloliquefaciens DSM 7] gi|307608137|emb|CBI44508.1| flagellar hook-filament junction [Bacillus amyloliquefaciens DSM 7] Length = 505 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 19/40 (47%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 A A + LSTV++N++N +T G+ +V Sbjct: 7 GLETARRALSAQQTALSTVSNNVANANTAGYTRQRVTLQS 46 Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 17/42 (40%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 S + EM MI +N+ +I ++ + I + + Sbjct: 461 SAVSLDEEMTNMIQFQHAYNAAARIITMQDEIFDKIINGMGT 502 >gi|254731831|ref|ZP_05190409.1| flagellar basal body rod protein FlgC [Brucella abortus bv. 4 str. 292] gi|260759600|ref|ZP_05871948.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 4 str. 292] gi|260669918|gb|EEX56858.1| flagellar basal-body rod protein FlgC [Brucella abortus bv. 4 str. 292] Length = 140 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 8/47 (17%), Positives = 21/47 (44%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G+++ N N + EM M + + + ++ + + + I + S Sbjct: 93 GYVKYPNVNMVVEMADMREANRSYEANLQVVRQARELISMTIDLLRS 139 Score = 44.5 bits (103), Expect = 0.013, Method: Composition-based stats. Identities = 12/106 (11%), Positives = 31/106 (29%), Gaps = 8/106 (7%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQ 54 Q++ I + RL V++N++N + +R V F + + Sbjct: 7 QSTLKIAASGLSTQSTRLRIVSENIANAQSTARTADTDPYRRKTVSFRTELEQGTGAAEV 66 Query: 55 KISFVA-SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 +++ V ++ + S + + Sbjct: 67 RVAEVGKDTSPFIEQYDPSHPAADARGYVKYPNVNMVVEMADMREA 112 >gi|253998491|ref|YP_003050554.1| flagellar basal-body rod protein FlgB [Methylovorus sp. SIP3-4] gi|313200566|ref|YP_004039224.1| flagellar basal-body rod protein flgb [Methylovorus sp. MP688] gi|253985170|gb|ACT50027.1| flagellar basal-body rod protein FlgB [Methylovorus sp. SIP3-4] gi|312439882|gb|ADQ83988.1| flagellar basal-body rod protein FlgB [Methylovorus sp. MP688] Length = 142 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 27/69 (39%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69 +A QR +A N++N DT ++ + F++ + + D S + K + Sbjct: 13 SALRVRAQRQELIAANIANADTPNYKARDINFNDALNNALSGNDTPGSGLDVSKTSSAHL 72 Query: 70 VGSFISTGT 78 G S Sbjct: 73 SGDPTSVDY 81 >gi|56421672|ref|YP_148990.1| flagellar hook-associated protein FlgK [Geobacillus kaustophilus HTA426] gi|56381514|dbj|BAD77422.1| flagellar hook-associated protein 1 (HAP1) [Geobacillus kaustophilus HTA426] Length = 531 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 8/41 (19%), Positives = 17/41 (41%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S+ + EM MI +N+ I ++ + + I + Sbjct: 487 SSVSLDEEMMNMIKFQHAYNAAARQITVIDEMLDKLINGMG 527 Score = 44.1 bits (102), Expect = 0.016, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 26/68 (38%), Gaps = 3/68 (4%) Query: 1 MQTSFN---IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS 57 M ++F+ A +A + L T N++N +T G+ +V+ +++ Sbjct: 1 MLSTFHGLEAARRAMMAQQAALYTTGHNIANANTEGYTRQRVQLKATPPFPTPGLNRPNI 60 Query: 58 FVASGKEY 65 G Sbjct: 61 PGQMGTGV 68 >gi|222084863|ref|YP_002543392.1| flagellar basal-body rod protein [Agrobacterium radiobacter K84] gi|221722311|gb|ACM25467.1| flagellar basal-body rod protein [Agrobacterium radiobacter K84] Length = 138 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 11/96 (11%), Positives = 28/96 (29%) Query: 143 GEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDS 202 G + K + V + G + + ++G+++ Sbjct: 37 DTPGADPYRRKTVTFGAELDRANGVTTVGVKKMGEDTGKFVEQYDPDNPAADQKGYVKMP 96 Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 N N + EM M + + + + + + I Sbjct: 97 NVNILVEMADMREANRSYEANLQTVRQARDLISSTI 132 Score = 44.1 bits (102), Expect = 0.016, Method: Composition-based stats. Identities = 15/104 (14%), Positives = 32/104 (30%), Gaps = 8/104 (7%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNT----DTVG---FRTIKVKF-SEVVGAIKNDIDQK 55 + I + A RL V++N++N DT G +R V F +E+ A Sbjct: 7 ALKIAGSGLEAQSTRLRVVSENIANARSTGDTPGADPYRRKTVTFGAELDRANGVTTVGV 66 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 +++ + + + + + Sbjct: 67 KKMGEDTGKFVEQYDPDNPAADQKGYVKMPNVNILVEMADMREA 110 >gi|238924173|ref|YP_002937689.1| hypothetical protein EUBREC_1811 [Eubacterium rectale ATCC 33656] gi|238875848|gb|ACR75555.1| hypothetical protein EUBREC_1811 [Eubacterium rectale ATCC 33656] gi|291524902|emb|CBK90489.1| flagellar basal-body rod protein FlgB [Eubacterium rectale DSM 17629] gi|291529043|emb|CBK94629.1| flagellar basal-body rod protein FlgB [Eubacterium rectale M104/1] Length = 128 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 33/78 (42%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A A QR + +A+N+SN DT G++ + F V+ + + SK Sbjct: 16 AADASYQREAILANNISNVDTPGYKRKDLNFEGVLSQELGRCKHQSLDKKISELDTSKLT 75 Query: 71 GSFISTGTELDFALEGDA 88 + + + + ++G+ Sbjct: 76 ANVYTDHSNYSYRMDGNN 93 >gi|94968682|ref|YP_590730.1| flagellar basal-body rod protein FlgC [Candidatus Koribacter versatilis Ellin345] gi|94550732|gb|ABF40656.1| flagellar basal-body rod protein FlgC [Candidatus Koribacter versatilis Ellin345] Length = 145 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 3/45 (6%), Positives = 19/45 (42%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 G + N + + E ++ + + + + ++ + +++ + Sbjct: 100 GMVAYPNIDPIEETVDLMSALRSYQLNASAVQAAKQMIQQSLEIL 144 Score = 35.2 bits (79), Expect = 7.0, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 27/106 (25%), Gaps = 12/106 (11%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE------VVGAIKNDI 52 A A R VA NM+N +T G +R +V FS +V A Sbjct: 7 IRTSGGAMAAERLRAEIVAGNMANAETTRTAEGGPYRRKQVIFSSAQPTFGMVLAKAGGE 66 Query: 53 DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98 V D EG + P Sbjct: 67 PAIGGGVRVLDIVQDSRDPVLRYEPGHPDANAEGMVAYPNIDPIEE 112 >gi|323698499|ref|ZP_08110411.1| flagellar basal-body rod protein FlgB [Desulfovibrio sp. ND132] gi|323458431|gb|EGB14296.1| flagellar basal-body rod protein FlgB [Desulfovibrio desulfuricans ND132] Length = 136 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 10/71 (14%), Positives = 23/71 (32%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 +R + V N++N +T G++ +++F E + + N Sbjct: 16 MDLRLERQNIVTGNIANVNTPGYKARRLEFEERLQSALNQNALGKLTRTQQDHLPIAFDP 75 Query: 72 SFISTGTELDF 82 + D Sbjct: 76 NGFKGDGIQDL 86 >gi|256158120|ref|ZP_05456038.1| flagellar basal body rod protein FlgC [Brucella ceti M490/95/1] gi|265996637|ref|ZP_06109194.1| flagellar basal-body rod protein FlgC [Brucella ceti M490/95/1] gi|262550934|gb|EEZ07095.1| flagellar basal-body rod protein FlgC [Brucella ceti M490/95/1] Length = 140 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 8/47 (17%), Positives = 21/47 (44%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G+++ N N + EM M + + + ++ + + + I + S Sbjct: 93 GYVKYPNVNMVVEMADMREANRSYEANLQVVRQARELISMTIDLLRS 139 Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 13/106 (12%), Positives = 32/106 (30%), Gaps = 8/106 (7%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQ 54 Q++ I + A RL V++N++N + +R V F + + Sbjct: 7 QSTLKIAASGLSAQSTRLRIVSENIANAQSTARTADTDPYRRKTVSFRTELEQGTGAAEV 66 Query: 55 KISFVA-SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 +++ V ++ + S + + Sbjct: 67 RVAEVGKDTSPFIGQYDPSHPAADARGYVKYPNVNMVVEMADMREA 112 >gi|332704817|ref|ZP_08424905.1| flagellar hook-associated protein FlgK [Desulfovibrio africanus str. Walvis Bay] gi|332554966|gb|EGJ52010.1| flagellar hook-associated protein FlgK [Desulfovibrio africanus str. Walvis Bay] Length = 725 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 18/201 (8%), Positives = 50/201 (24%), Gaps = 3/201 (1%) Query: 38 KVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG 97 + F+++ ++ + + + L Sbjct: 524 RDAFNDMFASMGLAVPADMQASIVNGSLRIASGNGHTFGFGQDSTGLLAGLGINTYFSGT 583 Query: 98 IILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157 + + V + SL++A ++ I + + G A Sbjct: 584 SARSIEINSAVASNTSLINAGHYNGAGEINEGDNLIASDIAALKDKKLDIHTDFGG-TAH 642 Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217 L + ++ + + ++ L S N EM +I Sbjct: 643 QTLSEFYNALVSSVGGDTSSAQFNFSYQNSLAQDLDAQQQSL--SGVNLDEEMSNLIKFQ 700 Query: 218 QKFNSITTLIDENEKSMLEAI 238 + + LI ++ + + Sbjct: 701 HSYTAAAKLISTADQMLQTLL 721 Score = 44.5 bits (103), Expect = 0.013, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 24/69 (34%), Gaps = 1/69 (1%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 +I A + + N+SN +TVG+ V+ E + + Q V + Sbjct: 5 NNIMDIARKGLFASQAAIEVTGQNISNVNTVGYSRRYVRLEESL-QLDYRPGQIGMGVEA 63 Query: 62 GKEYLSKEV 70 + + Sbjct: 64 AEVLRHFDR 72 >gi|295696110|ref|YP_003589348.1| flagellar basal-body rod protein FlgB [Bacillus tusciae DSM 2912] gi|295411712|gb|ADG06204.1| flagellar basal-body rod protein FlgB [Bacillus tusciae DSM 2912] Length = 135 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 23/70 (32%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A A R +ADN++N DT G+ V+F ++ F + ++ Sbjct: 15 ALDATALRQKLIADNVANVDTPGYHRQDVRFEDIFAQALAQPAPLAGFRTDPRHFIIGPP 74 Query: 71 GSFISTGTEL 80 Sbjct: 75 PLSQVRPETT 84 >gi|289523318|ref|ZP_06440172.1| flagellar hook-associated protein FlgK [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503010|gb|EFD24174.1| flagellar hook-associated protein FlgK [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 825 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 8/39 (20%), Positives = 16/39 (41%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 N EM ++ Q FN++ I ++ + I + Sbjct: 783 VNIDEEMMDIVKFQQAFNAMARYITTIDEMLDTIINRMG 821 >gi|212637791|ref|YP_002314316.1| flagellar hook-associated protein [Shewanella piezotolerans WP3] gi|212559275|gb|ACJ31729.1| Flagellar hook-associated protein, putative [Shewanella piezotolerans WP3] Length = 457 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 12/88 (13%), Positives = 30/88 (34%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + NIG++ A L+ ++N++N G+ +V S V + + Sbjct: 1 MSMLNIGMSGLNASMAALNATSNNVANAMVPGYSRQQVMMSSVGNGVYGSGAGVMVDGVR 60 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAW 89 + + +T ++ + Sbjct: 61 RISDQYEVAQLWNTTSNLGFAKVQSSYF 88 Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 7/41 (17%), Positives = 15/41 (36%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 S N E +I Q + + +I ++ + +I Sbjct: 417 TSGVNMDEEGTNLIIYQQSYQANAKVISTADQLFQTILNSI 457 >gi|167948872|ref|ZP_02535946.1| Flagellar basal-body rod protein FlgC [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 124 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 20/43 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N + EM MI ++ + + ++ ++ +R Sbjct: 79 GYIFRPNVNPVEEMANMISASRSYQGNVEVASAAKQLLMATLR 121 Score = 36.0 bits (81), Expect = 4.6, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 26/78 (33%), Gaps = 6/78 (7%) Query: 12 QLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65 A RL+ VA NM+N D V +R + F +V D + E Sbjct: 1 MSAQSLRLNLVASNMANVDAVSSSIDETYRARQPVFRAMVDQFNPDAPAVGVSMVGVIES 60 Query: 66 LSKEVGSFISTGTELDFA 83 + + + D A Sbjct: 61 QAPLIREYAPDHQMADEA 78 >gi|332994165|gb|AEF04220.1| flagellar basal-body rod protein FlgB [Alteromonas sp. SN2] Length = 143 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 9/73 (12%), Positives = 28/73 (38%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69 +A R+ ++ N++N +T G++ + F++ + + + D + + Sbjct: 14 SALAIRTDRMEVISGNLANANTPGYKAKDIDFNKAMESAMSAQDGQHKLGGGSLVRTHDK 73 Query: 70 VGSFISTGTELDF 82 + +F Sbjct: 74 HIGGDVSSVASNF 86 >gi|2275159|gb|AAB81411.1| FlgC [Sinorhizobium meliloti] Length = 138 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 14/99 (14%), Positives = 33/99 (33%) Query: 145 KGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNA 204 G + K I+ V E G + + + ++G ++ N Sbjct: 38 PGADPFRRKTISFAAEVDRASGASLVEVERLGTDDSEFNIEFDPGNPAADEKGMVKLPNL 97 Query: 205 NSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 N + EM M + + + I ++ + + I + + Sbjct: 98 NILIEMADMREANRAYEANLQTIKQSRDLISQTIDLLRA 136 Score = 43.7 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 21/54 (38%), Gaps = 7/54 (12%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKN 50 + + + A RL V++N++N + G FR + F+ V Sbjct: 6 ALKVSASGLQAESTRLRIVSENIANARSTGDAPGADPFRRKTISFAAEVDRASG 59 >gi|170694400|ref|ZP_02885554.1| flagellar hook-associated protein FlgK [Burkholderia graminis C4D1M] gi|170140823|gb|EDT08997.1| flagellar hook-associated protein FlgK [Burkholderia graminis C4D1M] Length = 657 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 28/220 (12%), Positives = 57/220 (25%), Gaps = 9/220 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI---DQKIS 57 M N+GL+ A + L+T N+SN T G+ F+E G + Sbjct: 1 MSNLINLGLSGLNAAQWGLTTTGQNISNASTPGYTIETPVFAETGGQYTGSGFLPQGVST 60 Query: 58 FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSA 117 + + + + A L + G + + Sbjct: 61 VTVTRQYSQYLTTQLNNAQSSSSSLATYNSLISQLNNLVGSPTAGLASAITGYFTGMQNV 120 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177 S L + Q + + + T +V + ++ Sbjct: 121 SNNASSLATRQTAMSGAQTLANQINAAGQQYDALRESVNTQLSNTVSQINSYTQQIAQLN 180 Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217 + + + L SN + Q+I + Sbjct: 181 GQISAASTQGQPPNQLLDQRDLAVSN------LSQLIGVQ 214 Score = 36.4 bits (82), Expect = 3.3, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 13/37 (35%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N E ++ Q + + + +I + + Sbjct: 617 SGVNINEEAANLLQYQQLYQANSKVIQTAQTLFQTLL 653 >gi|109899405|ref|YP_662660.1| flagellar basal-body rod protein FlgB [Pseudoalteromonas atlantica T6c] gi|109701686|gb|ABG41606.1| flagellar basal-body rod protein FlgB [Pseudoalteromonas atlantica T6c] Length = 133 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 9/58 (15%), Positives = 26/58 (44%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIS 75 R+ +A N++N +T G++ + F + + + +N +Q ++ + + Sbjct: 22 RMEVLAGNLANANTPGYKARDINFQDAMRSAQNSRNQNLTRTHENHIKGHMQGSGEVQ 79 >gi|254559638|ref|YP_003066733.1| flagellar hook-associated protein 1 FlgK [Methylobacterium extorquens DM4] gi|254266916|emb|CAX22715.1| putative flagellar hook-associated protein 1 FlgK [Methylobacterium extorquens DM4] Length = 632 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 12/73 (16%), Positives = 27/73 (36%) Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 QG + + + + + ++ T + F S N EM +I L Q + + + Sbjct: 559 QGVISVQGAAAAAAQDLDEGQSIALSTAQGRFASASGVNIDEEMSNLIALQQAYAANARV 618 Query: 227 IDENEKSMLEAIR 239 + + +R Sbjct: 619 LTAARDMIDTLLR 631 Score = 42.2 bits (97), Expect = 0.068, Method: Composition-based stats. Identities = 7/31 (22%), Positives = 16/31 (51%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGF 34 +F+ A + ++ V+ N++N T G+ Sbjct: 5 AFSTATAGLRVTQAQIGVVSQNIANVGTAGY 35 >gi|218528944|ref|YP_002419760.1| flagellar hook-associated protein FlgK [Methylobacterium chloromethanicum CM4] gi|218521247|gb|ACK81832.1| flagellar hook-associated protein FlgK [Methylobacterium chloromethanicum CM4] Length = 632 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 12/73 (16%), Positives = 27/73 (36%) Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 QG + + + + + ++ T + F S N EM +I L Q + + + Sbjct: 559 QGVISVQGAAAAAAQDLDEGQSIALSTAQGRFASASGVNIDEEMSNLIALQQAYAANARV 618 Query: 227 IDENEKSMLEAIR 239 + + +R Sbjct: 619 LTAARDMIDTLLR 631 Score = 42.2 bits (97), Expect = 0.068, Method: Composition-based stats. Identities = 7/31 (22%), Positives = 16/31 (51%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGF 34 +F+ A + ++ V+ N++N T G+ Sbjct: 5 AFSTATAGLRVTQAQIGVVSQNIANVGTAGY 35 >gi|91202526|emb|CAJ72165.1| similar to flagellar basal-body rod protein FlgB [Candidatus Kuenenia stuttgartiensis] Length = 125 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 15/22 (68%) Query: 21 TVADNMSNTDTVGFRTIKVKFS 42 VA+N++N +T G++ + V F Sbjct: 25 VVANNIANVNTPGYKKMVVNFE 46 >gi|307293790|ref|ZP_07573634.1| flagellar basal-body rod protein FlgB [Sphingobium chlorophenolicum L-1] gi|306879941|gb|EFN11158.1| flagellar basal-body rod protein FlgB [Sphingobium chlorophenolicum L-1] Length = 122 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 23/51 (45%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 A QRLS +A N++N T G++ + F + + + + V+ Sbjct: 14 ALALRSQRLSLLASNIANASTPGYKARDIDFESALKEATSRQGKSAADVSQ 64 >gi|239828340|ref|YP_002950964.1| flagellar hook-associated protein FlgK [Geobacillus sp. WCH70] gi|239808633|gb|ACS25698.1| flagellar hook-associated protein FlgK [Geobacillus sp. WCH70] Length = 541 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 20/44 (45%), Gaps = 3/44 (6%) Query: 1 MQTSFN---IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKF 41 M ++F+ A + + L N++N +T G+ +V F Sbjct: 1 MLSTFHGLEAAKRAMMTQQAALYVTGHNVANANTPGYTRQRVNF 44 Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 8/41 (19%), Positives = 17/41 (41%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S+ + EM MI +N+ I ++ + + I + Sbjct: 497 SSVSLDEEMMNMIKFQHAYNAAARQITVVDEMLDKIINGMG 537 >gi|188580158|ref|YP_001923603.1| flagellar hook-associated protein FlgK [Methylobacterium populi BJ001] gi|179343656|gb|ACB79068.1| flagellar hook-associated protein FlgK [Methylobacterium populi BJ001] Length = 632 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 16/120 (13%), Positives = 32/120 (26%) Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 Q S + A D QG + + + + Sbjct: 512 GTASGIGDGARPQALFTALTGTQRLFSSSSGISGINAPTRSSVADFVQGVISVQGAAAAA 571 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + ++ T + F S N EM +I L Q + + ++ + +R Sbjct: 572 AQDLDEGQGIALSTAQGRFASASGVNIDQEMSNLIALQQAYAANARVLTAARDMIDTLLR 631 Score = 42.2 bits (97), Expect = 0.061, Method: Composition-based stats. Identities = 7/31 (22%), Positives = 16/31 (51%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGF 34 +F+ A + ++ V+ N++N T G+ Sbjct: 5 AFSTATAGLRVTQAQIGVVSQNIANVGTAGY 35 >gi|78221659|ref|YP_383406.1| flagellar hook-associated protein [Geobacter metallireducens GS-15] gi|78192914|gb|ABB30681.1| Flagellar hook-associated protein [Geobacter metallireducens GS-15] Length = 477 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 10/80 (12%), Positives = 28/80 (35%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 Q+ +IG ++ +A L ++N++N +T G+ + + ++ + Sbjct: 4 QSILDIGKSSLIAQRLALEVTSENITNVNTPGYSRQTTVLATGITTMERGFPMGTGVKVA 63 Query: 62 GKEYLSKEVGSFISTGTELD 81 + + D Sbjct: 64 DIQRAYDAFLQSQLSKENTD 83 Score = 36.8 bits (83), Expect = 2.7, Method: Composition-based stats. Identities = 7/42 (16%), Positives = 16/42 (38%), Gaps = 2/42 (4%) Query: 199 LEDSN--ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 L +SN + E+ ++ + + LI+ M + Sbjct: 432 LRESNSGVSLDEELANLVKYQKAYEGAAKLINVGSDMMDTIL 473 >gi|332140543|ref|YP_004426281.1| flagellar basal-body rod protein FlgB [Alteromonas macleodii str. 'Deep ecotype'] gi|327550565|gb|AEA97283.1| flagellar basal-body rod protein FlgB [Alteromonas macleodii str. 'Deep ecotype'] Length = 144 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 7/42 (16%), Positives = 24/42 (57%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51 +A +R+ ++ N++N +T G++ + F++ + + ++ Sbjct: 14 SALKIRTERMEVISGNLANANTPGYKARDIDFNKAMQSAMHE 55 >gi|302670716|ref|YP_003830676.1| flagellar basal-body rod protein FlgC [Butyrivibrio proteoclasticus B316] gi|302395189|gb|ADL34094.1| flagellar basal-body rod protein FlgC [Butyrivibrio proteoclasticus B316] Length = 149 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 8/46 (17%), Positives = 21/46 (45%), Gaps = 1/46 (2%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G++ N N++ EM +I ++ + + T D ++ + + Sbjct: 103 GYVTYPNVNTVTEMTNLIDASRSYEANATAFDASKNIAARGL-ELG 147 Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 9/29 (31%), Positives = 17/29 (58%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTV 32 SFNI + A R+ +++N++N +T Sbjct: 6 SFNINSSGMTAQRFRMDIISENIANANTT 34 >gi|77918798|ref|YP_356613.1| flagellar basal-body rod protein FlgC [Pelobacter carbinolicus DSM 2380] gi|77544881|gb|ABA88443.1| flagellar basal-body rod protein FlgC [Pelobacter carbinolicus DSM 2380] Length = 143 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 19/42 (45%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G L N N M E+ M+ + + + + I ++ +A+ Sbjct: 98 GMLTLPNINVMEEVVDMMTAMRSYEANISAIKSAQRMATKAL 139 Score = 43.7 bits (101), Expect = 0.024, Method: Composition-based stats. Identities = 14/124 (11%), Positives = 36/124 (29%), Gaps = 15/124 (12%) Query: 1 MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G---------FRTIKVKFSEVV 45 M T+ + +A A RL+ ++ N++N T G F++ + F + + Sbjct: 1 MDIFTAMQVSASALSAQRTRLNVISGNLANVGTTRTPEGGPYRKRDVVFQSSQNMFEDHL 60 Query: 46 GAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGR 105 + Q + + + + ++T Sbjct: 61 QQAMDTNVQGVEVSRIQPNSRDFRTVYQPGHPDADENGMLTLPNINVMEEVVDMMTAMRS 120 Query: 106 FKVT 109 ++ Sbjct: 121 YEAN 124 >gi|332799170|ref|YP_004460669.1| flagellar basal-body rod protein FlgB [Tepidanaerobacter sp. Re1] gi|332696905|gb|AEE91362.1| flagellar basal-body rod protein FlgB [Tepidanaerobacter sp. Re1] Length = 134 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 9/35 (25%), Positives = 21/35 (60%) Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51 +R +++N++N DT G++ + + F E++ N Sbjct: 20 KRYELISNNLANVDTPGYKRMGMSFEEILMNSLNQ 54 >gi|217076647|ref|YP_002334363.1| flagellar hook-associated protein 1 [Thermosipho africanus TCF52B] gi|217036500|gb|ACJ75022.1| flagellar hook-associated protein 1 [Thermosipho africanus TCF52B] Length = 847 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 12/86 (13%), Positives = 30/86 (34%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + N GL + ++ V+ N++N +T GF + + Q + G Sbjct: 9 ALNTGLLGVYTSKLAMNVVSHNIANANTPGFSRQVPIIRTMPPIPATTLTQPSIPLQIGT 68 Query: 64 EYLSKEVGSFISTGTELDFALEGDAW 89 K++ ++ + + + Sbjct: 69 GSKVKDIQRIRDEFLDIQYRQVNNKY 94 Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 7/39 (17%), Positives = 15/39 (38%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 + EM MI FN+ ++ ++ + I + Sbjct: 805 VSLDEEMANMIKFQHAFNASARVMTAVDEMIGRVIDRLG 843 >gi|302387756|ref|YP_003823578.1| flagellar hook-associated protein FlgK [Clostridium saccharolyticum WM1] gi|302198384|gb|ADL05955.1| flagellar hook-associated protein FlgK [Clostridium saccharolyticum WM1] Length = 680 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 30/91 (32%), Gaps = 7/91 (7%) Query: 1 MQTSFNIGLA----AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56 M S G A A ++ L N++N +T G+ ++ ++V + Sbjct: 1 MTRSTFSGFTIAQLAMSASQRALDVTGQNIANINTKGYTKQQL---DLVSLNLRGGEVVS 57 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGD 87 + AS Y + G LD Sbjct: 58 TGPASKIGYGVEITGISQIRDPFLDVQYRNQ 88 Score = 41.8 bits (96), Expect = 0.088, Method: Composition-based stats. Identities = 5/41 (12%), Positives = 15/41 (36%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S + E ++ + + + L+ ++ + I N Sbjct: 636 SGVSLDEEGINLMQFQRSYTAAARLMTTLDEVLNVLINNTG 676 >gi|218886714|ref|YP_002436035.1| flagellar hook-associated protein FlgK [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218757668|gb|ACL08567.1| flagellar hook-associated protein FlgK [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 690 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 12/83 (14%), Positives = 27/83 (32%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + FNIG +A + +S ++N++N D G+ V+++ + Sbjct: 5 NSIFNIGSSALSNAQIGISVTSNNLANADVTGYSRQTVQYTTGPTVSSGGYTYGSGAEVA 64 Query: 62 GKEYLSKEVGSFISTGTELDFAL 84 D ++ Sbjct: 65 EITRHFSYTVESQYLSYSSDASM 87 >gi|212639570|ref|YP_002316090.1| flagellar basal body rod protein FlgB [Anoxybacillus flavithermus WK1] gi|212561050|gb|ACJ34105.1| Flagellar basal body rod protein FlgB [Anoxybacillus flavithermus WK1] Length = 126 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 9/65 (13%), Positives = 17/65 (26%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 + +A+N++N DT F+ V+F V Sbjct: 14 GLNYSSLKQKVIANNIANVDTPNFKAKDVQFRTEFHQALQAYRTDPRHFEFKGGTSKFFV 73 Query: 71 GSFIS 75 + Sbjct: 74 TTKND 78 >gi|224532015|ref|ZP_03672647.1| flagellar basal-body rod protein FlgB [Borrelia valaisiana VS116] gi|224511480|gb|EEF81886.1| flagellar basal-body rod protein FlgB [Borrelia valaisiana VS116] Length = 135 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 10/32 (31%), Positives = 17/32 (53%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 L R S ++DN++N +T F+ K+ F Sbjct: 15 LDVLSLRQSVISDNIANVNTPNFKRSKISFES 46 >gi|147678447|ref|YP_001212662.1| flagellar hook-associated protein FlgK [Pelotomaculum thermopropionicum SI] gi|146274544|dbj|BAF60293.1| flagellar hook-associated protein [Pelotomaculum thermopropionicum SI] Length = 471 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 7/41 (17%), Positives = 15/41 (36%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S + EM +I + +I ++ + I +A Sbjct: 430 SGVSMDEEMTSLIQYQYAYQGAARVITVLDEMLDTLINRMA 470 Score = 42.9 bits (99), Expect = 0.039, Method: Composition-based stats. Identities = 8/40 (20%), Positives = 15/40 (37%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 S I A + + N++N +T GF + + Sbjct: 8 SLEISRRGLAAGQTGMEVSGHNVANANTPGFTRQRPVLAA 47 >gi|291617018|ref|YP_003519760.1| FlgC [Pantoea ananatis LMG 20103] gi|291152048|gb|ADD76632.1| FlgC [Pantoea ananatis LMG 20103] gi|327393469|dbj|BAK10891.1| flagellar basal-body rod protein FlgC [Pantoea ananatis AJ13355] Length = 134 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 4/43 (9%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G+++ N + + E + ++ + + +++ + M++ + Sbjct: 89 GYVKMPNVDVVAETVNTMSASRSYQANVEVLNTVKSMMMKTLT 131 >gi|291613044|ref|YP_003523201.1| flagellar hook-associated protein FlgK [Sideroxydans lithotrophicus ES-1] gi|291583156|gb|ADE10814.1| flagellar hook-associated protein FlgK [Sideroxydans lithotrophicus ES-1] Length = 640 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 10/50 (20%), Positives = 24/50 (48%), Gaps = 1/50 (2%) Query: 4 SFN-IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 S I ++A A + L+T ++N++N +T G+ + + ++ Sbjct: 2 SIYGIAVSALNAAQAGLTTTSNNIANANTPGYSRQAIIQAGMLPQNTGSG 51 >gi|229916660|ref|YP_002885306.1| flagellar hook-associated protein FlgK [Exiguobacterium sp. AT1b] gi|229468089|gb|ACQ69861.1| flagellar hook-associated protein FlgK [Exiguobacterium sp. AT1b] Length = 504 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 8/41 (19%), Positives = 16/41 (39%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S + EM MI +N+ I ++ + + I + Sbjct: 460 SAVSLDEEMTMMIQYQHAYNAAARNITAVDEMLDKIINGMG 500 Score = 35.6 bits (80), Expect = 5.4, Method: Composition-based stats. Identities = 4/37 (10%), Positives = 12/37 (32%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 + + L +N++N G+ ++ Sbjct: 7 GLETARRSLSTHQWALQATGNNVANASNPGYSRQRLT 43 >gi|188991644|ref|YP_001903654.1| flagellar basal body rod protein FlgB [Xanthomonas campestris pv. campestris str. B100] gi|167733404|emb|CAP51605.1| unnamed protein product [Xanthomonas campestris pv. campestris] Length = 224 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 25/55 (45%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65 A EQR+ +A N+SN DT G++ + F + A + D + K Y Sbjct: 106 ALTLREQRMKLIASNLSNVDTPGYKAKDLNFEAALKAAEGVRDGGLMQATDAKHY 160 >gi|163850384|ref|YP_001638427.1| flagellar hook-associated protein FlgK [Methylobacterium extorquens PA1] gi|163661989|gb|ABY29356.1| flagellar hook-associated protein FlgK [Methylobacterium extorquens PA1] Length = 632 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 12/73 (16%), Positives = 27/73 (36%) Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 QG + + + + + ++ T + F S N EM +I L Q + + + Sbjct: 559 QGVISVQGAAAAAAQDLDEGQSIALSTAQGRFASASGVNIDEEMSNLIALQQAYAANARV 618 Query: 227 IDENEKSMLEAIR 239 + + +R Sbjct: 619 LTAARDMIDTLLR 631 Score = 42.2 bits (97), Expect = 0.072, Method: Composition-based stats. Identities = 7/31 (22%), Positives = 16/31 (51%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGF 34 +F+ A + ++ V+ N++N T G+ Sbjct: 5 AFSTATAGLRVTQAQIGVVSQNIANVGTAGY 35 >gi|91794989|ref|YP_564640.1| flagellar hook-associated protein [Shewanella denitrificans OS217] gi|91716991|gb|ABE56917.1| Flagellar hook-associated protein [Shewanella denitrificans OS217] Length = 457 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 30/216 (13%), Positives = 56/216 (25%), Gaps = 7/216 (3%) Query: 25 NMSNTD-TVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFA 83 N +N++ ++ F + F VG + + + E+ ++ A Sbjct: 246 NPANSNISIQFGKSQFVFENSVGGSMGSLMTYRDTQLANSQTYIDELAQHLANEFNNTLA 305 Query: 84 LEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVG 143 L D A + + S + LD + Sbjct: 306 LGTDLSGAAPVKNFLSVNSVNPAGSLAISSGFTPEDLALGLDGTQGDNSNLKALAALASK 365 Query: 144 EKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSN 203 G S G V S+ + G R+ + E S G Sbjct: 366 SLGFTSLGGAVSLGESFSSIVGALGSASRQAKADAKTNTDLHTEAKSQWASTSG------ 419 Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 N E +I Q + + +I E+ + Sbjct: 420 VNPDEEGVNLIVYQQAYQANAKVITTAERLFQTVLN 455 Score = 40.6 bits (93), Expect = 0.17, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 19/42 (45%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 NIG + LA L+ ++N++N G+ +V S Sbjct: 1 MNMLNIGKSGLLASAASLNATSNNVANAMVAGYSRQQVMTSS 42 >gi|254504860|ref|ZP_05117011.1| flagellar basal-body rod protein FlgC [Labrenzia alexandrii DFL-11] gi|222440931|gb|EEE47610.1| flagellar basal-body rod protein FlgC [Labrenzia alexandrii DFL-11] Length = 138 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 11/97 (11%), Positives = 33/97 (34%) Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNAN 205 G+ + K I ++ V + G + G+++ N N Sbjct: 41 GDDPYRRKTITFESEFNRVTQANLVAVKGIGTDKAPFTVEYDPGHPAADVDGYVKMPNVN 100 Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 ++ E+ M + + + ++ + + ++ I + Sbjct: 101 TLMELADMRETNRTYEANLKVMTQAREMVMRHIDLLR 137 Score = 44.1 bits (102), Expect = 0.017, Method: Composition-based stats. Identities = 11/79 (13%), Positives = 25/79 (31%), Gaps = 7/79 (8%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQKIS 57 I + A R+ V++N++N + G +R + F + + Sbjct: 9 LQIAASGLKAQSDRMRIVSENLANARSTGEASGDDPYRRKTITFESEFNRVTQANLVAVK 68 Query: 58 FVASGKEYLSKEVGSFIST 76 + + K + E Sbjct: 69 GIGTDKAPFTVEYDPGHPA 87 >gi|188534172|ref|YP_001907969.1| flagellar basal body rod protein FlgC [Erwinia tasmaniensis Et1/99] gi|188029214|emb|CAO97086.1| Cell-proximal portion of basal-body rod [Erwinia tasmaniensis Et1/99] Length = 134 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 4/43 (9%), Positives = 22/43 (51%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G+++ N + + E + ++ + + +++ ++ M++ + Sbjct: 89 GYVKMPNVDVVAETVNTLSASRSYQANVEVLNTVKQMMMKTLT 131 Score = 34.8 bits (78), Expect = 9.7, Method: Composition-based stats. Identities = 12/31 (38%), Positives = 18/31 (58%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32 F+I +A A QRL+ A N++N D+V Sbjct: 4 LNIFDIAGSAMAAQSQRLNVSASNLANADSV 34 >gi|149911696|ref|ZP_01900304.1| Flagellar hook-associated protein [Moritella sp. PE36] gi|149805226|gb|EDM65243.1| Flagellar hook-associated protein [Moritella sp. PE36] Length = 659 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 21/40 (52%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 M IG + L ++ L+T +N+SN +T G+ + + Sbjct: 1 MANLLQIGTSGVLGHQKMLNTTGNNISNVNTEGYSRQRTQ 40 >gi|269792279|ref|YP_003317183.1| flagellar hook-associated protein FlgK [Thermanaerovibrio acidaminovorans DSM 6589] gi|269099914|gb|ACZ18901.1| flagellar hook-associated protein FlgK [Thermanaerovibrio acidaminovorans DSM 6589] Length = 858 Score = 47.2 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 10/39 (25%), Positives = 16/39 (41%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 N EM +I Q FN I I ++ + + I + Sbjct: 816 VNMDEEMMDIIKFQQAFNGIARYITTIDEMLDKIINGMG 854 Score = 36.0 bits (81), Expect = 4.9, Method: Composition-based stats. Identities = 13/85 (15%), Positives = 25/85 (29%), Gaps = 3/85 (3%) Query: 1 MQTSFN---IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS 57 M SF +G A + + T N+SN + G+ +V S + + Sbjct: 1 MLNSFFGFEMGRRAMDYFRRGMETAGHNISNANVEGYSRQRVDASSSPPFTDPGLARPAL 60 Query: 58 FVASGKEYLSKEVGSFISTGTELDF 82 G + + + Sbjct: 61 PGQIGTGVQIDAIRRLRDLFLDSQY 85 >gi|329895981|ref|ZP_08271239.1| Flagellar hook-associated protein flgK [gamma proteobacterium IMCC3088] gi|328922062|gb|EGG29425.1| Flagellar hook-associated protein flgK [gamma proteobacterium IMCC3088] Length = 1003 Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 36/84 (42%), Gaps = 2/84 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--IDQKISF 58 M +IG +A Q ++T ++N+SN +T G+ +VK +E + + Sbjct: 1 MSDFLSIGASAINVYRQAIATTSNNISNVNTEGYSKQEVKITESYPTQIANYYLGTGAFT 60 Query: 59 VASGKEYLSKEVGSFISTGTELDF 82 + + Y S + ++LD Sbjct: 61 GSVQRSYDEFVERSLRDSASDLDA 84 >gi|138896699|ref|YP_001127152.1| flagellar hook-associated protein FlgK [Geobacillus thermodenitrificans NG80-2] gi|134268212|gb|ABO68407.1| Flagellar hook-associated protein 1 [Geobacillus thermodenitrificans NG80-2] Length = 540 Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 8/41 (19%), Positives = 17/41 (41%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S+ + EM MI +N+ I ++ + + I + Sbjct: 496 SSVSLDEEMMNMIKFQHAYNAAARQITVVDEMLDKIINGMG 536 Score = 44.1 bits (102), Expect = 0.018, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 26/68 (38%), Gaps = 3/68 (4%) Query: 1 MQTSFN---IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS 57 M ++F+ A +A + L T N++N +T G+ +V+ +++ Sbjct: 1 MLSTFHGLEAARRAMMAQQAALYTTGHNIANANTEGYTRQRVQLKATPPFPTPGLNRPNI 60 Query: 58 FVASGKEY 65 G Sbjct: 61 PGQMGTGV 68 >gi|332305612|ref|YP_004433463.1| flagellar basal-body rod protein FlgB [Glaciecola agarilytica 4H-3-7+YE-5] gi|332172941|gb|AEE22195.1| flagellar basal-body rod protein FlgB [Glaciecola agarilytica 4H-3-7+YE-5] Length = 133 Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 8/58 (13%), Positives = 26/58 (44%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIS 75 R+ +A N++N +T G++ + F + + + ++ Q ++ + + + Sbjct: 22 RMEVLAGNLANANTPGYKARDINFQDAMRSAQSGRSQNLTRTHENHIKGNMQGSGEMQ 79 >gi|328958295|ref|YP_004375681.1| flagellar hook-associated protein FlgK [Carnobacterium sp. 17-4] gi|328674619|gb|AEB30665.1| flagellar hook-associated protein FlgK [Carnobacterium sp. 17-4] Length = 472 Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 20/56 (35%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 N + L T + N+SN +TVG+ KV I Q + V Sbjct: 8 LNNATKGLNVQQAALQTTSHNISNANTVGYSRQKVTMVADNPYTLGGIGQLGTGVR 63 Score = 43.7 bits (101), Expect = 0.020, Method: Composition-based stats. Identities = 6/41 (14%), Positives = 13/41 (31%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S + E+ I F + + +I + + I Sbjct: 431 SGVSINEEVTNTIAYQSAFEANSRIISVVSEMLDTLINRTG 471 >gi|297583333|ref|YP_003699113.1| flagellar hook-associated protein FlgK [Bacillus selenitireducens MLS10] gi|297141790|gb|ADH98547.1| flagellar hook-associated protein FlgK [Bacillus selenitireducens MLS10] Length = 660 Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 7/41 (17%), Positives = 16/41 (39%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S+ + EM MI +N+ + ++ + I + Sbjct: 616 SSVSLDEEMTMMIQFQHAYNAAARSLTAVDEILDRIINQMG 656 Score = 43.3 bits (100), Expect = 0.031, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 20/43 (46%), Gaps = 3/43 (6%) Query: 1 MQTSFN---IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 M ++F+ A + L TV N++N +T G+ +V Sbjct: 1 MLSTFHGLETARKALNTAQTSLHTVGHNIANANTEGYSRQRVN 43 >gi|328555246|gb|AEB25738.1| flagellar hook-associated protein FlgK [Bacillus amyloliquefaciens TA208] gi|328913607|gb|AEB65203.1| flagellar hook-filament junction [Bacillus amyloliquefaciens LL3] Length = 505 Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 17/42 (40%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 S + EM MI +N+ +I ++ + I + + Sbjct: 461 SAVSLDEEMTNMIQFQHAYNAAARIITMQDEIFDKIINGMGT 502 Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 19/40 (47%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 A A + LSTV++N++N +T G+ +V Sbjct: 7 GLETARRALSAQQTALSTVSNNVANANTEGYTRQRVTLQS 46 >gi|312879808|ref|ZP_07739608.1| flagellar hook-associated protein FlgK [Aminomonas paucivorans DSM 12260] gi|310783099|gb|EFQ23497.1| flagellar hook-associated protein FlgK [Aminomonas paucivorans DSM 12260] Length = 872 Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 9/39 (23%), Positives = 15/39 (38%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 N EM +I Q FN I ++ + + I + Sbjct: 830 VNMDEEMMDIIKFQQAFNGAARYITTIDEMLDKIINGMG 868 Score = 37.2 bits (84), Expect = 2.2, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 20/46 (43%), Gaps = 3/46 (6%) Query: 1 MQTSFN---IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 M SF +G A + + T N++N D G+ +V+ S Sbjct: 1 MINSFFGFEMGRRAMDYFRRGMETAGHNIANADVEGYSRQRVEASS 46 >gi|326792656|ref|YP_004310477.1| flagellar hook-associated protein FlgK [Clostridium lentocellum DSM 5427] gi|326543420|gb|ADZ85279.1| flagellar hook-associated protein FlgK [Clostridium lentocellum DSM 5427] Length = 559 Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 26/79 (32%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 +S ++ A ++ L N+SN +T G+ ++ SE + + + V Sbjct: 4 ISSITKAVSGLAAAQKGLQVTGHNLSNVNTEGYTRQQLLQSESDYLVIGNRGSRYLQVGL 63 Query: 62 GKEYLSKEVGSFISTGTEL 80 G L Sbjct: 64 GVTQDEIRQIRNELADKRL 82 Score = 37.2 bits (84), Expect = 2.2, Method: Composition-based stats. Identities = 5/34 (14%), Positives = 12/34 (35%) Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 E M+ +N+ +I + + I + Sbjct: 526 EEFANMLKYQYAYNASARMITMLDGMLDTIINKM 559 >gi|83944175|ref|ZP_00956631.1| flagellar basal body rod protein [Sulfitobacter sp. EE-36] gi|83955124|ref|ZP_00963780.1| flagellar basal body rod protein [Sulfitobacter sp. NAS-14.1] gi|83840453|gb|EAP79626.1| flagellar basal body rod protein [Sulfitobacter sp. NAS-14.1] gi|83845042|gb|EAP82923.1| flagellar basal body rod protein [Sulfitobacter sp. EE-36] Length = 122 Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 15/127 (11%), Positives = 40/127 (31%), Gaps = 6/127 (4%) Query: 115 VSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRREN 174 + A G + ++ + + ++ S G +R + Sbjct: 1 MRAQGDRLRIVSENLANASSTAQTAGGDPYQRKTISFESATDPSTGAAIVQSAGVLRDDA 60 Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSM 234 P P D + G+++ N N + EM M + + + +++D+ Sbjct: 61 DFTLRYEPSHPAAD------QNGYIKMPNVNPLIEMSNMREAARSYEANLSMLDKARDMR 114 Query: 235 LEAIRNI 241 + + + Sbjct: 115 RQLVELL 121 >gi|323706357|ref|ZP_08117922.1| flagellar hook-associated protein FlgK [Thermoanaerobacterium xylanolyticum LX-11] gi|323534319|gb|EGB24105.1| flagellar hook-associated protein FlgK [Thermoanaerobacterium xylanolyticum LX-11] Length = 478 Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 6/41 (14%), Positives = 16/41 (39%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S + EM M+ + + + +I ++ + I + Sbjct: 436 SGVSLDEEMANMLKYQKSYEASARMITVMDELLDTLINKMG 476 Score = 43.3 bits (100), Expect = 0.033, Method: Composition-based stats. Identities = 10/54 (18%), Positives = 19/54 (35%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56 I A +Q L+ N+SN +T G+ + S + + + Sbjct: 5 QGLEIAKTGLFASQQALNLTGHNISNANTPGYTRQVIDLSAIAPPTTYGMADQW 58 >gi|77359728|ref|YP_339303.1| flagellar hook-associated [Pseudoalteromonas haloplanktis TAC125] gi|76874639|emb|CAI85860.1| putative flagellar hook-associated [Pseudoalteromonas haloplanktis TAC125] Length = 670 Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 34/93 (36%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 NI + A L T + N++N +T G+ + + ++ + Sbjct: 4 NLLNIANSGIRANTDLLQTTSKNIANVNTDGYVRERTEHGTMIDNQVGKGNTYRLLNEFA 63 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESP 95 ++ L+++ + + A D F+ E+ Sbjct: 64 QKQLNRDTSNKTFFDQFVSEANRVDTLFSQEAN 96 >gi|302874576|ref|YP_003843209.1| flagellar hook-associated protein FlgK [Clostridium cellulovorans 743B] gi|307690813|ref|ZP_07633259.1| flagellar hook-associated protein FlgK [Clostridium cellulovorans 743B] gi|302577433|gb|ADL51445.1| flagellar hook-associated protein FlgK [Clostridium cellulovorans 743B] Length = 579 Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 9/39 (23%), Positives = 19/39 (48%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 ++ N A + +ST + N++N +T G+ +V Sbjct: 5 LSTLNTANKGINAQQTAISTTSHNIANANTEGYSRQRVN 43 Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 5/40 (12%), Positives = 15/40 (37%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 S + EM +I + + +I ++ + + + Sbjct: 538 SGVSIDEEMTNLIQFQHAYVANAKVISTVDQLLDVLVNGL 577 >gi|240137460|ref|YP_002961931.1| putative flagellar hook-associated protein 1 FlgK [Methylobacterium extorquens AM1] gi|240007428|gb|ACS38654.1| putative flagellar hook-associated protein 1 FlgK [Methylobacterium extorquens AM1] Length = 632 Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 14/84 (16%), Positives = 29/84 (34%) Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIH 215 A D QG + + + + + ++ T + F S N EM +I Sbjct: 548 APTRSSVADFVQGVISVQGAAAAAAQDLDEGQSIALSTAQGRFASASGVNIDEEMSNLIA 607 Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239 L Q + + ++ + +R Sbjct: 608 LQQAYAANARVLTAARDMIDTLLR 631 Score = 41.8 bits (96), Expect = 0.081, Method: Composition-based stats. Identities = 7/31 (22%), Positives = 16/31 (51%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGF 34 +F+ A + ++ V+ N++N T G+ Sbjct: 5 AFSTATAGLRVTQAQIGVVSQNIANVGTAGY 35 >gi|21672602|ref|NP_660669.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|25008458|sp|Q8K9K8|FLGC_BUCAP RecName: Full=Flagellar basal-body rod protein flgC gi|21623233|gb|AAM67880.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 136 Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 5/43 (11%), Positives = 20/43 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ +N N + E I ++ + + ++ + +++ + Sbjct: 91 GYVLQTNVNPVSETINHISASRSYQANVEVLKTAKSMIMKTLS 133 Score = 39.9 bits (91), Expect = 0.29, Method: Composition-based stats. Identities = 7/28 (25%), Positives = 15/28 (53%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT 29 NI +A A ++++ +A N++N Sbjct: 4 LNILNIAGSAMSAQSEKINVIASNLANA 31 >gi|288962707|ref|YP_003453001.1| flagellar basal-body rod protein [Azospirillum sp. B510] gi|288914973|dbj|BAI76457.1| flagellar basal-body rod protein [Azospirillum sp. B510] Length = 139 Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 15/99 (15%), Positives = 36/99 (36%) Query: 145 KGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNA 204 KG + K ++ + + VR + G + + +G+++ N Sbjct: 41 KGGDPYRRKTVSFDSVMDRGVGAELVRVKQIGRDRSDFQLAYDPSHPAADDKGYVKKPNV 100 Query: 205 NSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 + EM M + F + +I+++ M + + S Sbjct: 101 QPLVEMMDMREAGRAFEASMNVIEQSRAMMTRVVDLLRS 139 Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 20/48 (41%), Gaps = 7/48 (14%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVV 45 I A A RL VA+N++N D+ +R V F V+ Sbjct: 10 LKIAGAGLQAQSTRLRVVAENLANADSTATAKGGDPYRRKTVSFDSVM 57 >gi|325295212|ref|YP_004281726.1| flagellar hook-associated protein FlgK [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065660|gb|ADY73667.1| flagellar hook-associated protein FlgK [Desulfurobacterium thermolithotrophum DSM 11699] Length = 451 Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 4/39 (10%), Positives = 17/39 (43%) Query: 200 EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 E S+ N E+ + + + + +++ ++ + + Sbjct: 409 ELSSVNMDEELLNLTRYQRAYEAAAKVVNVTDELLQTIL 447 Score = 37.2 bits (84), Expect = 2.4, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 28/79 (35%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 S +I A L+ + ++ N+SN T G+ F+++ G + F + Sbjct: 6 SLSIASQALLSNKAAINVTNRNISNVYTDGYSRETPVFADIPGTGVTVETVRRIFNKAYF 65 Query: 64 EYLSKEVGSFISTGTELDF 82 E + + D Sbjct: 66 TRYISENQNNKGLSSYKDI 84 >gi|300311349|ref|YP_003775441.1| Flagellar basal-body rod protein FlgB [Herbaspirillum seropedicae SmR1] gi|300074134|gb|ADJ63533.1| Flagellar basal-body rod FlgB protein [Herbaspirillum seropedicae SmR1] Length = 142 Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 12/67 (17%), Positives = 27/67 (40%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR +A N++N DT ++ V F++ + ++ + + + + Sbjct: 15 AMNLRAQRQQVLASNIANADTPNYKARDVNFADALKNALDNKATAMPPLELARTAATHVP 74 Query: 71 GSFISTG 77 G+ G Sbjct: 75 GTAPENG 81 >gi|167626161|ref|YP_001676455.1| flagellar hook-associated protein FlgK [Shewanella halifaxensis HAW-EB4] gi|167356183|gb|ABZ78796.1| flagellar hook-associated protein FlgK [Shewanella halifaxensis HAW-EB4] Length = 457 Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 7/41 (17%), Positives = 15/41 (36%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 S N E +I Q + + +I ++ + +I Sbjct: 417 TSGVNMDEEGVNLIIYQQSYQANAKVISTADQLFQTILNSI 457 Score = 43.7 bits (101), Expect = 0.024, Method: Composition-based stats. Identities = 12/79 (15%), Positives = 28/79 (35%), Gaps = 4/79 (5%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + NIG++ A L+ ++N++N G+ +V ++ ++ N + S V Sbjct: 1 MSMLNIGMSGLNASMAALTATSNNINNAMVPGYSRQQV----MLSSVGNGVYGSGSGVMV 56 Query: 62 GKEYLSKEVGSFISTGTEL 80 + Sbjct: 57 DGVRRISDQYEVAQLWNTT 75 >gi|15596283|ref|NP_249777.1| flagellar hook-associated protein FlgK [Pseudomonas aeruginosa PAO1] gi|218892950|ref|YP_002441819.1| flagellar hook-associated protein FlgK [Pseudomonas aeruginosa LESB58] gi|9947002|gb|AAG04475.1|AE004539_17 flagellar hook-associated protein 1 FlgK [Pseudomonas aeruginosa PAO1] gi|218773178|emb|CAW28990.1| flagellar hook-associated protein 1 FlgK [Pseudomonas aeruginosa LESB58] Length = 683 Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 9/52 (17%), Positives = 17/52 (32%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M +IGL+ + L+ N++N T G+ + Sbjct: 1 MSDLLSIGLSGLGTSQTWLTVTGHNITNVKTPGYSRQDAIQQTRIPQFSGAG 52 >gi|218508323|ref|ZP_03506201.1| probable flagellar basal body rod protein [Rhizobium etli Brasil 5] gi|327191050|gb|EGE58103.1| putative flagellar basal body rod protein [Rhizobium etli CNPAF512] Length = 100 Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 10/29 (34%), Positives = 18/29 (62%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGF 34 NI L+ A R+ +A+N++N+ T G+ Sbjct: 8 NIALSGMRAQMTRIGAIANNVANSSTPGY 36 Score = 37.2 bits (84), Expect = 2.1, Method: Composition-based stats. Identities = 5/33 (15%), Positives = 13/33 (39%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 S+ + E+ +MI Q + + + + Sbjct: 58 TSDVDPATELTEMIEAEQAYKANAAVFETGADM 90 >gi|254234222|ref|ZP_04927545.1| flagellar hook-associated protein 1 FlgK [Pseudomonas aeruginosa C3719] gi|126166153|gb|EAZ51664.1| flagellar hook-associated protein 1 FlgK [Pseudomonas aeruginosa C3719] Length = 683 Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 9/52 (17%), Positives = 17/52 (32%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M +IGL+ + L+ N++N T G+ + Sbjct: 1 MSDLLSIGLSGLGTSQTWLTVTGHNITNVKTPGYSRQDAIQQTRIPQFSGAG 52 >gi|325288761|ref|YP_004264942.1| flagellar hook-associated protein FlgK [Syntrophobotulus glycolicus DSM 8271] gi|324964162|gb|ADY54941.1| flagellar hook-associated protein FlgK [Syntrophobotulus glycolicus DSM 8271] Length = 493 Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 4/41 (9%), Positives = 16/41 (39%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S + EM +I +++ ++ + + + + + Sbjct: 450 SGVSIDEEMTNLIKFQTAYSAAARMVTIMDDMLDKVVNGMG 490 Score = 36.4 bits (82), Expect = 3.6, Method: Composition-based stats. Identities = 12/81 (14%), Positives = 25/81 (30%), Gaps = 1/81 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG-AIKNDIDQKISFVASG 62 +G A A + L+ N+SN T G+ + + + + Sbjct: 7 GLELGKRALSAQQLALNAAGHNISNASTQGYTRQVANLATTIPDQLYLFGHTQSVGTGVA 66 Query: 63 KEYLSKEVGSFISTGTELDFA 83 + + +FI + A Sbjct: 67 VATIIRVRDNFIDRQYRWETA 87 >gi|300114801|ref|YP_003761376.1| flagellar basal-body rod protein FlgC [Nitrosococcus watsonii C-113] gi|299540738|gb|ADJ29055.1| flagellar basal-body rod protein FlgC [Nitrosococcus watsonii C-113] Length = 137 Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 24/43 (55%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N NS+ EM MI ++ + + + + +++ +L ++ Sbjct: 92 GYIFHPNVNSIEEMANMISASRSYQNNVEMANTSKQLLLRTLQ 134 Score = 38.3 bits (87), Expect = 0.98, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 31/87 (35%), Gaps = 6/87 (6%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56 F+I A A RL+T A N++N D+V +R + F+ ++ + Sbjct: 5 KVFDIAGTAMSAQTLRLNTTASNLANADSVSSSIHQTYRARQPVFATLLDELNPAAPAGG 64 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFA 83 V E + + + A Sbjct: 65 VQVLGVVESGAPLQQEYAPDHPMANEA 91 >gi|197285504|ref|YP_002151376.1| flagellar hook-associated protein 1 [Proteus mirabilis HI4320] gi|194682991|emb|CAR43432.1| flagellar hook-associated protein 1 [Proteus mirabilis HI4320] Length = 547 Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 19/42 (45%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 N ++ A + +ST+++N++N + F+E Sbjct: 3 NNLINTAMSGLNAAQAAMSTISNNIANQKVNWYNRQMTVFNE 44 >gi|288940415|ref|YP_003442655.1| flagellar hook-associated protein FlgK [Allochromatium vinosum DSM 180] gi|288895787|gb|ADC61623.1| flagellar hook-associated protein FlgK [Allochromatium vinosum DSM 180] Length = 723 Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 29/79 (36%), Gaps = 3/79 (3%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + G+ LA ++ L+T + N+SN T G+ +V ++ I + Sbjct: 1 MSVLGTGITGLLAFQRALATTSHNISNAATEGYSRQRV---DLATNIPQRLGSGYIGQGV 57 Query: 62 GKEYLSKEVGSFISTGTEL 80 + + + +I Sbjct: 58 NVDGIRRLQNDWIDAQLRT 76 Score = 42.9 bits (99), Expect = 0.037, Method: Composition-based stats. Identities = 14/127 (11%), Positives = 32/127 (25%), Gaps = 6/127 (4%) Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 + + ++ + G +GE +G+ G ++ G R Sbjct: 602 TPAAGDLFTVELGKDRPGDNRNMLEMTGIQGERLIQGRTTLQGGYNTLIADVGTQTRRAQ 661 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 + G N E MI Q + + +I + + Sbjct: 662 ISRDSSAVQLESAQQQRESLSG------VNLDEEAANMIRFQQAYRAAAQVITTSGEMFD 715 Query: 236 EAIRNIA 242 + + Sbjct: 716 TLLNAVR 722 >gi|284989559|ref|YP_003408113.1| flagellar basal-body rod protein FlgB [Geodermatophilus obscurus DSM 43160] gi|284062804|gb|ADB73742.1| flagellar basal-body rod protein FlgB [Geodermatophilus obscurus DSM 43160] Length = 115 Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 14/84 (16%), Positives = 27/84 (32%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69 +A L QR ADN++N T GF +V F + + + L Sbjct: 12 SALNGLAQRQRVTADNIANLQTPGFLAGRVDFETGLRGALTSGQTPTATTGTVHRSLEPT 71 Query: 70 VGSFISTGTELDFALEGDAWFALE 93 + + + + + + Sbjct: 72 RMDGNNVNLDAETVIATETGLRYQ 95 >gi|254519424|ref|ZP_05131480.1| flagellar basal-body rod protein FlgC [Clostridium sp. 7_2_43FAA] gi|226913173|gb|EEH98374.1| flagellar basal-body rod protein FlgC [Clostridium sp. 7_2_43FAA] Length = 134 Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 6/46 (13%), Positives = 22/46 (47%), Gaps = 1/46 (2%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G++ N N + EM +I ++ + + ++ ++ +++ + Sbjct: 89 GYVTMPNVNLLNEMADIIAASRAYEANVDTLNASKSMFTKSL-ELG 133 Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 7/30 (23%), Positives = 13/30 (43%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV 32 + I + A R+ T+ N++N T Sbjct: 5 NTMRISASGLSAERLRMDTITSNITNATTT 34 >gi|253681456|ref|ZP_04862253.1| flagellar basal-body rod protein FlgB [Clostridium botulinum D str. 1873] gi|253561168|gb|EES90620.1| flagellar basal-body rod protein FlgB [Clostridium botulinum D str. 1873] Length = 134 Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 12/70 (17%), Positives = 30/70 (42%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 + A +R + + +N++N +T G++ V F + + K+ +D KI+ Sbjct: 19 SLKATAKRKNVINNNIANFNTKGYKRSYVTFEDSLKESKDKLDLKITNDKHIAYKKKFGE 78 Query: 71 GSFISTGTEL 80 + ++ Sbjct: 79 INVKKDESDS 88 >gi|225871925|ref|YP_002753379.1| flagellar basal-body rod protein FlgC [Acidobacterium capsulatum ATCC 51196] gi|225793067|gb|ACO33157.1| flagellar basal-body rod protein FlgC [Acidobacterium capsulatum ATCC 51196] Length = 165 Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 7/49 (14%), Positives = 23/49 (46%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 K+G++ N + EM ++ T+ + ++ + + + A+ + + Sbjct: 117 KQGYVSYPEINPVTEMVDLMSATRSYGLNSSAVQATKNMINSALEILKA 165 >gi|217976223|ref|YP_002360370.1| flagellar basal body rod protein FlgC [Methylocella silvestris BL2] gi|217501599|gb|ACK49008.1| flagellar basal-body rod protein FlgC [Methylocella silvestris BL2] Length = 140 Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 14/99 (14%), Positives = 30/99 (30%) Query: 145 KGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNA 204 G K I VR + G + + +GF++ N Sbjct: 40 PGADPYARKTITFASELDRASGVDLVRVKGIGADKAPFRVEQDPGNPAADSKGFVKLPNV 99 Query: 205 NSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 N + EM M + + + ++ + + + + S Sbjct: 100 NVIMEMADMREANRSYEANLQIVKQTRELSSMTVDLLRS 138 Score = 39.5 bits (90), Expect = 0.46, Method: Composition-based stats. Identities = 15/104 (14%), Positives = 34/104 (32%), Gaps = 8/104 (7%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKF-SEVVGAIKNDIDQK 55 S + + A RL V++N++N + G + + F SE+ A D+ + Sbjct: 8 SLRVAGSGLEAQSARLRIVSENLANAQSTGSTPGADPYARKTITFASELDRASGVDLVRV 67 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 A + ++ + ++ L + Sbjct: 68 KGIGADKAPFRVEQDPGNPAADSKGFVKLPNVNVIMEMADMREA 111 >gi|120597303|ref|YP_961877.1| flagellar basal-body rod protein FlgC [Shewanella sp. W3-18-1] gi|146294552|ref|YP_001184976.1| flagellar basal-body rod protein FlgC [Shewanella putrefaciens CN-32] gi|120557396|gb|ABM23323.1| flagellar basal-body rod protein FlgC [Shewanella sp. W3-18-1] gi|145566242|gb|ABP77177.1| flagellar basal-body rod protein FlgC [Shewanella putrefaciens CN-32] Length = 138 Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 8/44 (18%), Positives = 22/44 (50%) Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +G++ SN N++ EM M+ ++ F + +++ ++ Sbjct: 91 QGYVAYSNVNTIEEMADMMAASRSFETSVEVMNRARSMQQGLLQ 134 >gi|323703356|ref|ZP_08115006.1| flagellar hook-associated protein FlgK [Desulfotomaculum nigrificans DSM 574] gi|323531719|gb|EGB21608.1| flagellar hook-associated protein FlgK [Desulfotomaculum nigrificans DSM 574] Length = 496 Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 6/37 (16%), Positives = 13/37 (35%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 I +A + + N++N T G+ + Sbjct: 7 GLEIAKRGTMAHRKAMDVTGHNIANASTPGYSRQEAV 43 Score = 43.3 bits (100), Expect = 0.026, Method: Composition-based stats. Identities = 6/41 (14%), Positives = 16/41 (39%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S + E+ ++I + + +I ++ + I I Sbjct: 456 SGVSVDEELTRVIQFQYGYQASARMIAIQDEMLDYLINRIR 496 >gi|253688966|ref|YP_003018156.1| flagellar hook-associated protein FlgK [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251755544|gb|ACT13620.1| flagellar hook-associated protein FlgK [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 568 Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 13/74 (17%), Positives = 27/74 (36%), Gaps = 2/74 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA--IKNDIDQKISF 58 M N ++ + LSTV++N+SN G+ + + I ++ Sbjct: 1 MSNLINTAMSGLKGAQVALSTVSNNISNQAVTGYSRQNAILEQATSSSTSAGYIGNGVNV 60 Query: 59 VASGKEYLSKEVGS 72 V+ ++Y Sbjct: 61 VSINRQYNEFITNQ 74 >gi|227355995|ref|ZP_03840387.1| flagellar hook-associated protein 1 [Proteus mirabilis ATCC 29906] gi|227163983|gb|EEI48885.1| flagellar hook-associated protein 1 [Proteus mirabilis ATCC 29906] Length = 547 Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 19/42 (45%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 N ++ A + +ST+++N++N + F+E Sbjct: 3 NNLINTAMSGLNAAQAAMSTISNNIANQKVNWYNRQMTVFNE 44 >gi|21242730|ref|NP_642312.1| flagellar basal body rod protein FlgB [Xanthomonas axonopodis pv. citri str. 306] gi|78047589|ref|YP_363764.1| flagellar basal body rod protein FlgB [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|294625271|ref|ZP_06703910.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294664588|ref|ZP_06729929.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|21108206|gb|AAM36848.1| flagellar protein [Xanthomonas axonopodis pv. citri str. 306] gi|78036019|emb|CAJ23710.1| flagellar basal body protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|292600445|gb|EFF44543.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292605645|gb|EFF48955.1| flagellar protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 133 Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 26/55 (47%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65 A EQR+ +A N+SN DT G++ + F + + + + D + K Y Sbjct: 15 ALTLREQRMKLIASNLSNVDTPGYKAKDLNFEAALKSAQGEQDGGLLQTTDAKHY 69 >gi|306817677|ref|ZP_07451419.1| possible flagellar hook-associated protein FlgK [Mobiluncus mulieris ATCC 35239] gi|304649491|gb|EFM46774.1| possible flagellar hook-associated protein FlgK [Mobiluncus mulieris ATCC 35239] Length = 916 Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 20/42 (47%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44 +S N GL A ++ + N+ N +T G+ +V+ + Sbjct: 6 SSLNAGLTGLYAAQRLIEVSGQNIINQNTPGYTRQRVEQKAL 47 Score = 40.2 bits (92), Expect = 0.23, Method: Composition-based stats. Identities = 4/39 (10%), Positives = 11/39 (28%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S+ + E+ +I + + + I Sbjct: 875 QSSVDMNEEVMNLIRGQHAYAGAARITSTVNSMLETLIN 913 >gi|239907786|ref|YP_002954527.1| flagellar hook-associated protein 1 [Desulfovibrio magneticus RS-1] gi|239797652|dbj|BAH76641.1| flagellar hook-associated protein 1 [Desulfovibrio magneticus RS-1] Length = 710 Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 28/211 (13%), Positives = 48/211 (22%), Gaps = 7/211 (3%) Query: 31 TVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWF 90 T G ++V AI N +S S + + Sbjct: 500 TPG----VTTLDDLVTAIDNAFSPPAFSDTYLDASISNNRLSISGVNGRTFQFGDDSSGV 555 Query: 91 ALESPRGIILT--RDGRF-KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGE 147 LT R G+ ++ V V + + E Sbjct: 556 LAALGVNTFLTGSRASDVAVNDVVGTDLNRINAGHVGADGLVAVGDNLTAKAMTELENTA 615 Query: 148 ISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSM 207 IS T+ D V + S + + + L S N Sbjct: 616 ISFYVAGKTTVNQTLTDNYASLVSKIGSDTAAASYQATYQAALAAELNEQQLSTSGVNLD 675 Query: 208 YEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 E+ MI + + L+ + Sbjct: 676 EELTNMIKFQHSYQAAAKLVSTANSMFETVL 706 Score = 44.5 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 13/81 (16%), Positives = 29/81 (35%), Gaps = 2/81 (2%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE--VVGAIKNDIDQKISFVA 60 + ++G A A + L +N+SN DT G+ V + V + + Sbjct: 6 SLLSMGAGALRANQAALQVTGNNISNVDTEGYSRQSVVLKDGQYVNTFTGQVGTGVVAQE 65 Query: 61 SGKEYLSKEVGSFISTGTELD 81 + + +++ + D Sbjct: 66 VVRAHDKFVEAQYLTKVSARD 86 >gi|256376476|ref|YP_003100136.1| flagellar basal-body rod protein FlgB [Actinosynnema mirum DSM 43827] gi|255920779|gb|ACU36290.1| flagellar basal-body rod protein FlgB [Actinosynnema mirum DSM 43827] Length = 118 Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 23/69 (33%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69 AA L R A+N++N T GF KV F E +G + + + Sbjct: 12 AALTGLAMRQRVSANNIANVQTPGFIASKVNFEESLGEAVRSGEGSTAVRGTRPVISDSV 71 Query: 70 VGSFISTGT 78 + Sbjct: 72 NAARQDGNN 80 >gi|207728352|ref|YP_002256746.1| flagellar hook-associated protein 1 [Ralstonia solanacearum MolK2] gi|206591598|emb|CAQ57210.1| flagellar hook-associated protein 1 [Ralstonia solanacearum MolK2] Length = 642 Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 26/83 (31%), Gaps = 2/83 (2%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE--VVGAIKNDIDQKISFVA 60 + NI A + L +N++N T G+ + +E + + Q ++ Sbjct: 4 SLLNIAATGLRAADVNLQVTGNNIANASTAGYSRQEAVQTENIPMATGAGYLGQGVNVTT 63 Query: 61 SGKEYLSKEVGSFISTGTELDFA 83 + Y S A Sbjct: 64 VKRIYDQFLTAQVQSGQAATSAA 86 >gi|154687656|ref|YP_001422817.1| flagellar hook-associated protein FlgK [Bacillus amyloliquefaciens FZB42] gi|154353507|gb|ABS75586.1| FlgK [Bacillus amyloliquefaciens FZB42] Length = 505 Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 17/42 (40%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 S + EM MI +N+ +I ++ + I + + Sbjct: 461 SAVSLDEEMTNMIQFQHAYNAAARIITMQDEIFDKIINGMGT 502 Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 19/40 (47%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 A A + LSTV++N++N +T G+ +V Sbjct: 7 GLETARRALSAQQTALSTVSNNVANANTEGYTRQRVTLQS 46 >gi|254463002|ref|ZP_05076418.1| flagellar basal-body rod protein FlgC [Rhodobacterales bacterium HTCC2083] gi|206679591|gb|EDZ44078.1| flagellar basal-body rod protein FlgC [Rhodobacteraceae bacterium HTCC2083] Length = 139 Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 6/43 (13%), Positives = 19/43 (44%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ + + EM MI ++++ + ++ M+ + Sbjct: 93 GYVYIAPVDVNEEMVDMIEASRQYQNNLEVVTTMRTLMMRTVN 135 >gi|126668555|ref|ZP_01739509.1| flagellar basal-body rod protein B [Marinobacter sp. ELB17] gi|126626960|gb|EAZ97603.1| flagellar basal-body rod protein B [Marinobacter sp. ELB17] Length = 136 Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 24/54 (44%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 A A QR +A+N++N DT GF+ + F ++ +++ + Sbjct: 15 ALQARVQRAEILANNLANADTPGFKARDIDFQAIMKRAQSNASGFGMNTTNSGH 68 >gi|2916794|emb|CAA11960.1| flagellar basal-body rod protein [Sinorhizobium meliloti] Length = 139 Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 14/99 (14%), Positives = 33/99 (33%) Query: 145 KGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNA 204 G + K I+ V E G + + + ++G ++ N Sbjct: 39 PGADPFRRKTISFAAEVDRASGASLVEVERLGTDDSEFNIEFDPGNPAADEKGMVKLPNL 98 Query: 205 NSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 N + EM M + + + I ++ + + I + + Sbjct: 99 NILIEMADMREANRAYEANLQTIKQSRDLISQTIDLLRA 137 Score = 42.9 bits (99), Expect = 0.035, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 21/54 (38%), Gaps = 7/54 (12%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKN 50 + + + A RL V++N++N + G FR + F+ V Sbjct: 7 ALKVSASGLQAESTRLRIVSENIANARSTGDAPGADPFRRKTISFAAEVDRASG 60 >gi|332187897|ref|ZP_08389630.1| flagellar hook-associated protein FlgK [Sphingomonas sp. S17] gi|332012058|gb|EGI54130.1| flagellar hook-associated protein FlgK [Sphingomonas sp. S17] Length = 447 Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M +IG + A + L+ V +N++N T G+ V EVV A ++ + Sbjct: 1 MSDLLSIGASGVRAYQTALTAVGENIANVGTDGYSRRTVTMREVVPAAGLAANKVSAGSG 60 >gi|238752861|ref|ZP_04614326.1| Flagellar hook-associated protein [Yersinia rohdei ATCC 43380] gi|238708900|gb|EEQ01153.1| Flagellar hook-associated protein [Yersinia rohdei ATCC 43380] Length = 452 Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 12/89 (13%), Positives = 23/89 (25%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 L+ A + L A N++N T G+ + + S + + V Sbjct: 1 MNFIKTALSGTKAAQAHLDATAMNVANMKTPGYSRQRAEQSALGASGVGAYAGNGVNVDG 60 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWF 90 K + G + Sbjct: 61 IKRISDHYLVKQEWQANSQSAYFNGKQRY 89 Score = 39.5 bits (90), Expect = 0.44, Method: Composition-based stats. Identities = 3/37 (8%), Positives = 15/37 (40%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S+ + E ++ + + S ++ ++ + + Sbjct: 413 SSVDKDEEAINLMEYQRVYQSNIKVVSTGDQLFRDLL 449 >gi|258513988|ref|YP_003190210.1| flagellar hook-associated protein FlgK [Desulfotomaculum acetoxidans DSM 771] gi|257777693|gb|ACV61587.1| flagellar hook-associated protein FlgK [Desulfotomaculum acetoxidans DSM 771] Length = 430 Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 9/37 (24%), Positives = 17/37 (45%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 IG A A + + +N++N +T G+ +V Sbjct: 7 GLEIGKRALQANKTGMDVTGNNVANANTTGYSRQRVN 43 Score = 42.9 bits (99), Expect = 0.038, Method: Composition-based stats. Identities = 4/37 (10%), Positives = 15/37 (40%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S + EM ++ + + + +I ++ + + Sbjct: 390 SGVSIEEEMTNLLQYQYGYQAASKIITTIDQMLETLL 426 >gi|261419416|ref|YP_003253098.1| flagellar basal body rod protein FlgB [Geobacillus sp. Y412MC61] gi|319766231|ref|YP_004131732.1| flagellar basal-body rod protein FlgB [Geobacillus sp. Y412MC52] gi|261375873|gb|ACX78616.1| flagellar basal-body rod protein FlgB [Geobacillus sp. Y412MC61] gi|317111097|gb|ADU93589.1| flagellar basal-body rod protein FlgB [Geobacillus sp. Y412MC52] Length = 129 Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 10/33 (30%), Positives = 16/33 (48%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 R +ADN++N DT G++ V+F Sbjct: 14 GLRYAALRQQAIADNIANADTPGYKAKDVRFQS 46 >gi|297584033|ref|YP_003699813.1| flagellar basal-body rod protein FlgC [Bacillus selenitireducens MLS10] gi|297142490|gb|ADH99247.1| flagellar basal-body rod protein FlgC [Bacillus selenitireducens MLS10] Length = 142 Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 19/52 (36%), Gaps = 10/52 (19%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG---------FRTIKVKFS 42 M N+ + + R+ V+ NM+N T G +R V F Sbjct: 1 MFHGMNVSASGLTSQRLRMDVVSSNMANAESTRGRFVDGEWEPYRRKMVTFE 52 Score = 44.9 bits (104), Expect = 0.009, Method: Composition-based stats. Identities = 8/35 (22%), Positives = 19/35 (54%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 G++E N + + EM ++ T+ + + T D ++ Sbjct: 106 GYVELPNVDPLKEMIDLMSATRSYEAGVTSFDAHK 140 >gi|1086559|gb|AAB68966.1| FlgC [Agrobacterium tumefaciens] gi|2459712|gb|AAB71788.1| FlgC [Agrobacterium tumefaciens] Length = 139 Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 9/68 (13%), Positives = 24/68 (35%) Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 G+ + + G ++ N N + EM M + +++ +I + + Sbjct: 70 GVDRGDFVHEYDPGNPAADTNGMVKMPNVNVVIEMADMREANRSYDANLQVIRQTRDLVA 129 Query: 236 EAIRNIAS 243 I + + Sbjct: 130 STIDLLKA 137 Score = 38.3 bits (87), Expect = 1.0, Method: Composition-based stats. Identities = 11/48 (22%), Positives = 19/48 (39%), Gaps = 7/48 (14%) Query: 10 AAQLALEQRLSTVADNMSNT----DTVG---FRTIKVKFSEVVGAIKN 50 + RL V++N++N DT G +R V F + + Sbjct: 13 SGLEVQSTRLRIVSENIANARSTGDTPGADPYRRKTVTFGSELDHVSG 60 >gi|251772446|gb|EES53013.1| flagellar basal-body rod protein FlgC [Leptospirillum ferrodiazotrophum] Length = 145 Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 7/40 (17%), Positives = 20/40 (50%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 G++ N + + EM +I ++ + + T +D ++ + Sbjct: 100 GYVMHPNVSKLEEMTNLIDASRAYEANLTAMDTTKRMASK 139 Score = 36.4 bits (82), Expect = 3.7, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 6/47 (12%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTD-TVG-----FRTIKVKFSEV 44 + I + A RL+ +A N++N D T G + V F+ V Sbjct: 6 AMRISASGLEAERVRLNVLAGNLANADATRGNPNGTYERRDVIFAAV 52 >gi|209963558|ref|YP_002296473.1| flagellar hook-associated protein 1 FlgK, putative [Rhodospirillum centenum SW] gi|209957024|gb|ACI97660.1| flagellar hook-associated protein 1 FlgK, putative [Rhodospirillum centenum SW] Length = 495 Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 8/41 (19%), Positives = 20/41 (48%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44 + L A +Q+ + ++ N++N T G+ +V + + Sbjct: 6 ALQTALTGLQAQQQKSAILSRNVANATTPGYTRKEVTLASL 46 >gi|74317654|ref|YP_315394.1| flagellar basal-body rod protein FlgC [Thiobacillus denitrificans ATCC 25259] gi|74057149|gb|AAZ97589.1| flagellar basal-body rod protein FlgC [Thiobacillus denitrificans ATCC 25259] Length = 134 Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 8/31 (25%), Positives = 16/31 (51%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 G++ N N + EM MI ++ + S ++ Sbjct: 89 GYVTMPNVNVVEEMVNMISASRSYQSNVEMM 119 Score = 41.4 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 6/107 (5%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDT----VG--FRTIKVKFSEVVGAIKNDIDQKI 56 FN+ +A A QRL+TVA N++N D+ G ++ +V F+ + Sbjct: 5 NIFNVAGSAMNAQSQRLNTVASNLANADSATSANGQPYKAKQVVFAAAPVGDNGATGVNV 64 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103 + V + + + + E I +R Sbjct: 65 AAVIDDPSPMKTVYDPKNPLADDKGYVTMPNVNVVEEMVNMISASRS 111 >gi|254239444|ref|ZP_04932766.1| flagellar hook-associated protein 1 FlgK [Pseudomonas aeruginosa 2192] gi|126192822|gb|EAZ56885.1| flagellar hook-associated protein 1 FlgK [Pseudomonas aeruginosa 2192] Length = 682 Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 10/52 (19%), Positives = 17/52 (32%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M +IGL+ + L+ N++N T G+ V Sbjct: 1 MSDLLSIGLSGLGTSQTWLTITGHNITNVKTPGYSRQDAIQQTQVPQFSGAG 52 >gi|83747648|ref|ZP_00944684.1| FlgK [Ralstonia solanacearum UW551] gi|207739731|ref|YP_002258124.1| flagellar hook-associated protein 1 [Ralstonia solanacearum IPO1609] gi|83725700|gb|EAP72842.1| FlgK [Ralstonia solanacearum UW551] gi|206593113|emb|CAQ60019.1| flagellar hook-associated protein 1 [Ralstonia solanacearum IPO1609] Length = 642 Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 26/83 (31%), Gaps = 2/83 (2%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE--VVGAIKNDIDQKISFVA 60 + NI A + L +N++N T G+ + +E + + Q ++ Sbjct: 4 SLLNIAATGLRAADVNLQVTGNNIANASTAGYSRQEAVQTENIPMATGAGYLGQGVNVTT 63 Query: 61 SGKEYLSKEVGSFISTGTELDFA 83 + Y S A Sbjct: 64 VKRIYDQFLTAQVQSGQAATSAA 86 >gi|260888523|ref|ZP_05899786.1| flagellar hook-associated protein FlgK [Selenomonas sputigena ATCC 35185] gi|330838173|ref|YP_004412753.1| flagellar hook-associated protein FlgK [Selenomonas sputigena ATCC 35185] gi|260861720|gb|EEX76220.1| flagellar hook-associated protein FlgK [Selenomonas sputigena ATCC 35185] gi|329745937|gb|AEB99293.1| flagellar hook-associated protein FlgK [Selenomonas sputigena ATCC 35185] Length = 571 Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 7/41 (17%), Positives = 16/41 (39%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E+ MI Q +++ + ++ + + N Sbjct: 527 SGVNWNEELSNMIKFQQGYSACARCMTTMDEMLDRLVNNTG 567 Score = 38.3 bits (87), Expect = 0.84, Method: Composition-based stats. Identities = 9/40 (22%), Positives = 15/40 (37%), Gaps = 7/40 (17%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 M + L TV N++N +T G+ +V Sbjct: 1 MVRGIY-------NNQLSLDTVGHNITNANTEGYSRQRVN 33 >gi|187935497|ref|YP_001885039.1| flagellar basal body rod protein FlgC [Clostridium botulinum B str. Eklund 17B] gi|187723650|gb|ACD24871.1| flagellar basal-body rod protein FlgC [Clostridium botulinum B str. Eklund 17B] Length = 135 Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 20/42 (47%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N N + EM M+ T+ + + ++ + +A+ Sbjct: 90 GYVTMPNVNVLNEMADMMVSTRSYEANVETLNALKGMFSKAL 131 Score = 37.5 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 32/107 (29%), Gaps = 7/107 (6%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTV----G---FRTIKVKFSEVVGAIKNDIDQKI 56 S I A R+ T+ NM+N+ T G + F E + + K Sbjct: 6 SMQISATGISAERLRMDTITSNMTNSSTTRSADGSGPYVRKIAVFQEALDENRKMAGIKP 65 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103 + K L K E + + E ++ TR Sbjct: 66 VKIVEDKSPLRKVYKPTHPDADETGYVTMPNVNVLNEMADMMVSTRS 112 >gi|119469947|ref|ZP_01612752.1| flagellar biosynthesis; cell-proximal portion of basal-body rod [Alteromonadales bacterium TW-7] gi|119446657|gb|EAW27930.1| flagellar biosynthesis; cell-proximal portion of basal-body rod [Alteromonadales bacterium TW-7] Length = 135 Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 27/54 (50%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65 L QR +A N++N DT G++ + F+ + A K+ + V + +++ Sbjct: 16 MLIRSQRAEVLASNIANADTPGYKAKDINFASALKAAKSHQQSGNTMVTTNEKH 69 >gi|313106041|ref|ZP_07792300.1| flagellar hook-associated protein FlgK [Pseudomonas aeruginosa 39016] gi|310878802|gb|EFQ37396.1| flagellar hook-associated protein FlgK [Pseudomonas aeruginosa 39016] Length = 682 Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 10/52 (19%), Positives = 17/52 (32%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M +IGL+ + L+ N++N T G+ V Sbjct: 1 MSDLLSIGLSGLGTSQTWLTITGHNITNVKTPGYSRQDAIQQTQVPQFSGAG 52 >gi|295697521|ref|YP_003590759.1| flagellar hook-associated protein FlgK [Bacillus tusciae DSM 2912] gi|295413123|gb|ADG07615.1| flagellar hook-associated protein FlgK [Bacillus tusciae DSM 2912] Length = 540 Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 6/36 (16%), Positives = 15/36 (41%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + EM MI Q + + ++ ++ + + I Sbjct: 498 VSIDEEMANMIRFQQAYGASARMVTAIDQMLDKLIN 533 Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 7/40 (17%), Positives = 16/40 (40%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 + + ++T + N+ N +T G+ +V S Sbjct: 7 GLETAVRGLRGQQAAINTASHNIDNANTPGYTRQRVDLSA 46 >gi|242309757|ref|ZP_04808912.1| flagellar basal body rod protein FlgC [Helicobacter pullorum MIT 98-5489] gi|239523758|gb|EEQ63624.1| flagellar basal body rod protein FlgC [Helicobacter pullorum MIT 98-5489] Length = 166 Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 17/43 (39%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N + EM +I T+ + + + AI Sbjct: 120 GYVAYPNINPVVEMADLIEATKAYQANVAAFQSAKNMATTAIS 162 Score = 39.5 bits (90), Expect = 0.45, Method: Composition-based stats. Identities = 9/31 (29%), Positives = 18/31 (58%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32 +SF+I A QR++ ++ N++N +T Sbjct: 3 LSSFDISGYGLSAQRQRVNLISSNIANANTT 33 >gi|332524834|ref|ZP_08401025.1| flagellar basal body rod protein [Rubrivivax benzoatilyticus JA2] gi|332108134|gb|EGJ09358.1| flagellar basal body rod protein [Rubrivivax benzoatilyticus JA2] Length = 164 Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 10/33 (30%), Positives = 16/33 (48%) Query: 8 GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 L+ A + RL N++N+ T GFR + Sbjct: 73 SLSGLNAAQTRLDVAGHNVANSLTEGFRRQVAQ 105 >gi|326386936|ref|ZP_08208550.1| Flagellar hook-associated protein [Novosphingobium nitrogenifigens DSM 19370] gi|326208616|gb|EGD59419.1| Flagellar hook-associated protein [Novosphingobium nitrogenifigens DSM 19370] Length = 454 Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 12/74 (16%), Positives = 23/74 (31%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 +IG + A + L N++N T G+ E+V IS Sbjct: 4 NLLSIGASGARAAQIALDVTGQNIANASTDGYVRRAANNVELVSPSGWSAPNDISLAGVT 63 Query: 63 KEYLSKEVGSFIST 76 +++ + Sbjct: 64 VSGITRNADIYTQA 77 Score = 36.4 bits (82), Expect = 4.0, Method: Composition-based stats. Identities = 3/36 (8%), Positives = 10/36 (27%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + E ++ Q F + ++ + Sbjct: 417 VDLNTEAVNLVRFQQAFQASGKVMQTASDIFTTMLN 452 >gi|94264091|ref|ZP_01287890.1| Flagellar basal-body rod protein FlgC [delta proteobacterium MLMS-1] gi|93455507|gb|EAT05697.1| Flagellar basal-body rod protein FlgC [delta proteobacterium MLMS-1] Length = 144 Score = 46.8 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 20/42 (47%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G + N N+ +M M++ + + + +D ++ L A+ Sbjct: 99 GIVRYPNVNTAEQMVDMMNARRSYEANVAALDAVKEMALRAL 140 Score = 39.1 bits (89), Expect = 0.48, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 8/51 (15%) Query: 1 MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43 M T+ NI +A A RL+ + NM+N +T G +R V F Sbjct: 1 MDILTAMNISGSALKAERSRLNIASMNMANANTTRTVEGGPYRAKSVVFEA 51 >gi|269836576|ref|YP_003318804.1| flagellar basal-body rod protein FlgB [Sphaerobacter thermophilus DSM 20745] gi|269785839|gb|ACZ37982.1| flagellar basal-body rod protein FlgB [Sphaerobacter thermophilus DSM 20745] Length = 138 Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 20/43 (46%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 A L R A+N++N DT F+ +V F E + +D Sbjct: 15 ALDGLALRQRVTANNVANADTPRFKASRVTFEETLRQRLHDEP 57 >gi|23099962|ref|NP_693428.1| flagellar hook-associated protein FlgK [Oceanobacillus iheyensis HTE831] gi|22778193|dbj|BAC14463.1| flagellar hook-associated protein 1 [Oceanobacillus iheyensis HTE831] Length = 490 Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 7/41 (17%), Positives = 15/41 (36%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S + EM MI +N+ + ++ + I + Sbjct: 446 SAVSLDEEMSNMIKFQHAYNAAARGMTTMDEMIDTIINRMG 486 Score = 41.4 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 16/34 (47%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44 A A + L T N+SN +T G+ +V + Sbjct: 13 ALAAQQSALYTTGHNISNANTPGYTRQRVNLEAM 46 >gi|290474980|ref|YP_003467864.1| flagellar hook-filament junction protein 1 [Xenorhabdus bovienii SS-2004] gi|289174297|emb|CBJ81087.1| flagellar biosynthesis; hook-filament junction protein 1 [Xenorhabdus bovienii SS-2004] Length = 546 Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 18/41 (43%), Gaps = 1/41 (2%) Query: 1 MQTSF-NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 M S N ++ A + + V +N++N+ VG+ Sbjct: 1 MSNSLMNTAMSGINAAQVAMGVVGNNIANSKNVGYNRQTTV 41 >gi|121607555|ref|YP_995362.1| flagellar hook-associated protein FlgK [Verminephrobacter eiseniae EF01-2] gi|121552195|gb|ABM56344.1| flagellar hook-associated protein FlgK [Verminephrobacter eiseniae EF01-2] Length = 658 Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 20/48 (41%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 N+ A LA + L T N++N +T G+ V V G + Sbjct: 4 LNVSTRALLADQVVLQTTGHNIANVNTPGYSRQSVALQTVPGQFTGNG 51 Score = 41.4 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 18/137 (13%), Positives = 39/137 (28%), Gaps = 7/137 (5%) Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170 DG + G D + + + + G S + +S G+ Sbjct: 523 DGWEIRLQGAPNTGDTVLIGNALDPQYGDRFSRDTGNASALMDLRDLKMFDESTLSDGYA 582 Query: 171 RRENSGISPNIPPTPLEDLSGVTVKRGFLED-----SNANSMYEMGQMIHLTQKFNSITT 225 + + T+ LE S N E ++I Q F + + Sbjct: 583 QAIAQVGTRTQSAK-FAADLSRTIAAN-LERDRTAISGVNLDEEAARLIQYQQAFQASSK 640 Query: 226 LIDENEKSMLEAIRNIA 242 ++ + ++ +A Sbjct: 641 VMQVAQNIFDALLQGLA 657 >gi|91776306|ref|YP_546062.1| flagellar basal-body rod protein FlgB [Methylobacillus flagellatus KT] gi|91710293|gb|ABE50221.1| flagellar basal-body rod protein FlgB [Methylobacillus flagellatus KT] Length = 131 Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 10/66 (15%), Positives = 22/66 (33%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69 A QR +A N++N DT G++ + F++ + + ++ Sbjct: 13 TALRVRGQRQELLAANIANADTPGYKARDINFADTFKQALTGASGGLKADTTHPGHIPAT 72 Query: 70 VGSFIS 75 Sbjct: 73 ASHQNG 78 >gi|51598554|ref|YP_072742.1| flagellar basal body rod protein FlgB [Borrelia garinii PBi] gi|51573125|gb|AAU07150.1| flagellar basal-body rod protein [Borrelia garinii PBi] Length = 135 Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 9/32 (28%), Positives = 16/32 (50%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 L R ++DN++N DT F+ ++ F Sbjct: 15 LDVLSLRQGVISDNIANVDTPNFKRSRISFES 46 >gi|51598442|ref|YP_072630.1| flagellar hook-associated protein FlgK [Borrelia garinii PBi] gi|51573013|gb|AAU07038.1| flagellar hook-associated protein [Borrelia garinii PBi] Length = 627 Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 16/41 (39%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E+ MI Q F + + I + + + I + Sbjct: 586 SGVNKDEELANMIEFQQAFIAASKFITVSAELIDTIINKMG 626 Score = 35.6 bits (80), Expect = 6.0, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 19/46 (41%), Gaps = 3/46 (6%) Query: 1 MQT---SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 M + IG + A + ++TV N+SN G+ +V Sbjct: 1 MDSTFSGIEIGKRSLFAHKDAMNTVGHNLSNATKPGYSRQRVTMKT 46 >gi|197122916|ref|YP_002134867.1| flagellar hook-associated protein FlgK [Anaeromyxobacter sp. K] gi|196172765|gb|ACG73738.1| flagellar hook-associated protein FlgK [Anaeromyxobacter sp. K] Length = 469 Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 5/38 (13%), Positives = 16/38 (42%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S + E+ +M + + +I+ +I + + + Sbjct: 429 ASGVSVDEELLEMEKAQRAYEAISKVIQASSEMFDTLL 466 Score = 36.0 bits (81), Expect = 5.0, Method: Composition-based stats. Identities = 5/43 (11%), Positives = 13/43 (30%) Query: 24 DNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66 N+ N +T G+ + + + A + + Sbjct: 27 HNLQNANTPGYARQRAVLATALPAQQAGGAWIGRGATLAQVTQ 69 >gi|156976147|ref|YP_001447053.1| flagellar hook-associated protein [Vibrio harveyi ATCC BAA-1116] gi|156527741|gb|ABU72826.1| hypothetical protein VIBHAR_04918 [Vibrio harveyi ATCC BAA-1116] Length = 457 Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 17/43 (39%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44 NI L+ A L A N++N T G+ + + V Sbjct: 1 MNLVNIALSGLNANRVALDVTAQNVANIITPGYSRQQALMTSV 43 >gi|107100531|ref|ZP_01364449.1| hypothetical protein PaerPA_01001556 [Pseudomonas aeruginosa PACS2] gi|13183733|gb|AAK15324.1|AF332547_1 flagellar hook-associated protein 1 FlgK [Pseudomonas aeruginosa] Length = 682 Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 10/52 (19%), Positives = 17/52 (32%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M +IGL+ + L+ N++N T G+ V Sbjct: 1 MSDLLSIGLSGLGTSQTWLTITGHNITNVKTPGYSRQDAIQQTQVPQFSGAG 52 >gi|330830306|ref|YP_004393258.1| flagellar basal-body rod protein FlgB [Aeromonas veronii B565] gi|328805442|gb|AEB50641.1| Flagellar basal-body rod protein FlgB [Aeromonas veronii B565] Length = 132 Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 12/93 (12%), Positives = 35/93 (37%) Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76 +R ++ N++N DT GF+ + F++ + ++ ++ + L+ + + Sbjct: 21 KRAEVLSSNIANADTPGFKARDINFAQALQEAQSHQGFGLATTSEKHFALNMDAPGTVQY 80 Query: 77 GTELDFALEGDAWFALESPRGIILTRDGRFKVT 109 L ++ R L ++ + Sbjct: 81 RNPLQPDTGDGNTVDVQQERSEFLRNSLEYQTS 113 >gi|300696919|ref|YP_003747580.1| flagellar hook-filament junction protein 1 [Ralstonia solanacearum CFBP2957] gi|299073643|emb|CBJ53163.1| flagellar hook-filament junction protein 1 [Ralstonia solanacearum CFBP2957] Length = 642 Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 26/83 (31%), Gaps = 2/83 (2%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE--VVGAIKNDIDQKISFVA 60 + NI A + L +N++N T G+ + +E + + Q ++ Sbjct: 4 SLLNIAATGLRAADVNLQVTGNNIANASTAGYSRQEAVQTENIPMATGAGYLGQGVNVTT 63 Query: 61 SGKEYLSKEVGSFISTGTELDFA 83 + Y S A Sbjct: 64 VKRIYDQFLTAQVQSGQAATSAA 86 >gi|254780380|ref|YP_003064793.1| flagellar basal body rod protein FlgC [Candidatus Liberibacter asiaticus str. psy62] gi|254040057|gb|ACT56853.1| flagellar basal body rod protein FlgC [Candidatus Liberibacter asiaticus str. psy62] Length = 134 Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 11/60 (18%), Positives = 22/60 (36%), Gaps = 10/60 (16%) Query: 1 MQTSF---NIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKN 50 M +I + R+ +++N++N T G +R + F EV+ Sbjct: 1 MDYLIASAHIANSGLAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGG 60 Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats. Identities = 18/119 (15%), Positives = 37/119 (31%) Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183 L + S +QI ++ T+ V G VR + G+ + Sbjct: 15 LAVQSARMQIISENIANARTTGDTPGSDPYRRKTISFEEVMHGSGGVRVKKIGVDQSTFV 74 Query: 184 TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 + V G ++ N N + E M + + + I ++ M + + Sbjct: 75 EEFDPGHPVANASGIVKYPNVNVLVETADMRETNRLYMANLQTIKQSHDMMTTTLDLLR 133 >gi|167034947|ref|YP_001670178.1| flagellar basal body rod protein FlgB [Pseudomonas putida GB-1] gi|166861435|gb|ABY99842.1| flagellar basal-body rod protein FlgB [Pseudomonas putida GB-1] Length = 136 Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 23/64 (35%) Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76 QR +A+N++N DT ++ + F+ V+ A + F E Sbjct: 21 QRAEVLANNIANADTPNYKARDMDFASVLAAESDKQQSGGRFSLDRTNSRHIEADGLAMA 80 Query: 77 GTEL 80 L Sbjct: 81 DETL 84 >gi|329901236|ref|ZP_08272761.1| Flagellar hook-associated protein flgK [Oxalobacteraceae bacterium IMCC9480] gi|327549168|gb|EGF33760.1| Flagellar hook-associated protein flgK [Oxalobacteraceae bacterium IMCC9480] Length = 644 Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 28/83 (33%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M ++G + LA + ++T N++N T G+ V + G D Sbjct: 1 MGNILSVGQSGLLAAQLGVTTTGHNIANAATPGYSRQVVIQTSAGGQSSGDGFVGQGTTV 60 Query: 61 SGKEYLSKEVGSFISTGTELDFA 83 + + + + + A Sbjct: 61 ASIQRIYDAYTATRVNAAQTSKA 83 >gi|307546971|ref|YP_003899450.1| flagellar basal body rod protein FlgB [Halomonas elongata DSM 2581] gi|307218995|emb|CBV44265.1| flagellar basal body rod protein FlgB [Halomonas elongata DSM 2581] Length = 137 Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 11/58 (18%), Positives = 21/58 (36%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIS 75 R +A N++N DT G++ + FS + +A + G + Sbjct: 22 RQQVLASNIANADTPGYKARDMDFSSALEQAMQRGGGNAEGLALERTSARHLAGQAST 79 >gi|225166310|ref|ZP_03727999.1| flagellar hook-associated protein FlgK [Opitutaceae bacterium TAV2] gi|224799447|gb|EEG17987.1| flagellar hook-associated protein FlgK [Opitutaceae bacterium TAV2] Length = 469 Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 3/42 (7%), Positives = 15/42 (35%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S + E +++ + + + +I + + + + Sbjct: 426 TSGVSLDEETINLVNYQRAYQASARVITILDDLLNTVVNRLG 467 >gi|90415320|ref|ZP_01223254.1| flagellar basal-body rod protein FlgC [marine gamma proteobacterium HTCC2207] gi|90332643|gb|EAS47813.1| flagellar basal-body rod protein FlgC [marine gamma proteobacterium HTCC2207] Length = 141 Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 22/42 (52%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 GF+ SN N + EM +M+ + + + +++ + M+ + Sbjct: 95 GFVFSSNVNEVTEMVEMMGAARSYQNNVEVVNTARELMMRTL 136 Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 33/104 (31%), Gaps = 6/104 (5%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKI 56 F I +A A R+++ A NM+N TV F+ + F ++ + D + Sbjct: 5 NIFGIAASAMNAQMVRMNSTASNMANAGTVSSSAEDAFKAKRPVFQALLQEHQLDQGSQF 64 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL 100 + + + A + F+ + Sbjct: 65 LGGVKVLDMVDDTAPNKKMHDPGNPLADKDGFVFSSNVNEVTEM 108 >gi|257866375|ref|ZP_05646028.1| flagellar basal-body rod protein FlgB [Enterococcus casseliflavus EC30] gi|257873109|ref|ZP_05652762.1| flagellar basal-body rod protein FlgB [Enterococcus casseliflavus EC10] gi|257875988|ref|ZP_05655641.1| flagellar basal-body rod protein FlgB [Enterococcus casseliflavus EC20] gi|257800333|gb|EEV29361.1| flagellar basal-body rod protein FlgB [Enterococcus casseliflavus EC30] gi|257807273|gb|EEV36095.1| flagellar basal-body rod protein FlgB [Enterococcus casseliflavus EC10] gi|257810154|gb|EEV38974.1| flagellar basal-body rod protein FlgB [Enterococcus casseliflavus EC20] Length = 120 Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 11/67 (16%), Positives = 27/67 (40%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M ++++ A QR ++ N++N +T G++ ++ F + + A Sbjct: 1 MLDTYDLLKTAMNVSAQRAELISSNIANVNTDGYKAKRIVFESELKQALASSGTDAATEA 60 Query: 61 SGKEYLS 67 S + Sbjct: 61 SVSQVKP 67 >gi|288940407|ref|YP_003442647.1| flagellar basal-body rod protein FlgC [Allochromatium vinosum DSM 180] gi|288895779|gb|ADC61615.1| flagellar basal-body rod protein FlgC [Allochromatium vinosum DSM 180] Length = 139 Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 5/43 (11%), Positives = 18/43 (41%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N + EM M+ ++ + + ++ + ++ Sbjct: 93 GYVFRPAINVVEEMANMMSASRSYEANVEVLTTARSLLQRTLQ 135 Score = 39.9 bits (91), Expect = 0.34, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 28/111 (25%), Gaps = 13/111 (11%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56 FN +A A RL+TVA NM+N +R V F V+ + Sbjct: 6 RIFNTSASALTAQSVRLNTVASNMANAAMTASTAEDTYRAKHVLFQTVIDQEDPNGVAMP 65 Query: 57 SFVA-------SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL 100 VA G A+ A Sbjct: 66 VRVAGIVDDECEPIPTYEPNHPHANEEGYVFRPAINVVEEMANMMSASRSY 116 >gi|119715016|ref|YP_921981.1| flagellar hook-associated protein FlgK [Nocardioides sp. JS614] gi|119535677|gb|ABL80294.1| flagellar hook-associated protein FlgK [Nocardioides sp. JS614] Length = 466 Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 18/42 (42%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44 +S N L A + L + N++N T G+ +V + Sbjct: 6 SSINTALTALRYQQVALDVASTNVANVGTDGYVRRRVVGETL 47 >gi|88704300|ref|ZP_01102014.1| flagellar hook-associated protein 1 FlgK [Congregibacter litoralis KT71] gi|88701351|gb|EAQ98456.1| flagellar hook-associated protein 1 FlgK [Congregibacter litoralis KT71] Length = 627 Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 11/71 (15%), Positives = 27/71 (38%) Query: 13 LALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGS 72 ++L++ +ST N++N +T GF +V+F+ + + + + + Sbjct: 1 MSLQRAISTTGQNIANVNTEGFSRQRVEFAALEPQLSGSGFVGSGVGIAAITRSYDQYLA 60 Query: 73 FISTGTELDFA 83 A Sbjct: 61 GDVLDRTSSAA 71 >gi|300693344|ref|YP_003749317.1| flagellar hook-filament junction protein 1 [Ralstonia solanacearum PSI07] gi|299075381|emb|CBJ34676.1| flagellar hook-filament junction protein 1 [Ralstonia solanacearum PSI07] Length = 642 Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 26/83 (31%), Gaps = 2/83 (2%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE--VVGAIKNDIDQKISFVA 60 + NIG + L +N++N T G+ + +E + + Q ++ Sbjct: 4 SLLNIGATGLRVADINLQVTGNNIANASTPGYSRQEAVQTENTPMATGAGYLGQGVNVTT 63 Query: 61 SGKEYLSKEVGSFISTGTELDFA 83 + Y S A Sbjct: 64 VKRIYDQFLTAQVQSGQASTSAA 86 >gi|332088749|gb|EGI93861.1| flagellar basal-body rod protein flgF domain protein [Shigella boydii 5216-82] Length = 50 Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 8/37 (21%), Positives = 14/37 (37%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTI 37 M + + A + + A N++N GFR Sbjct: 1 MDHAIYTAMGAASQTLNQQAVTASNLANASMPGFRAQ 37 >gi|326791546|ref|YP_004309367.1| flagellar basal-body rod protein FlgB [Clostridium lentocellum DSM 5427] gi|326542310|gb|ADZ84169.1| flagellar basal-body rod protein FlgB [Clostridium lentocellum DSM 5427] Length = 122 Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 11/87 (12%), Positives = 31/87 (35%), Gaps = 3/87 (3%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 N ++ A R +++N+SN DT G++ V+F ++ + Sbjct: 7 IDLMNTAIS---ATMLRKGIISENISNVDTPGYKRKDVRFETILEKEIKKGGTAGLNLKD 63 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDA 88 + + + + + ++ + Sbjct: 64 IEPEIYTDYANSSYRLDGNNVDIDVEM 90 >gi|291526374|emb|CBK91961.1| flagellar hook-associated protein FlgK [Eubacterium rectale DSM 17629] gi|291526819|emb|CBK92405.1| flagellar hook-associated protein FlgK [Eubacterium rectale M104/1] Length = 617 Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 9/40 (22%), Positives = 19/40 (47%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 +IG +A + + +T A+N++N T G+ + Sbjct: 7 GLHIGSSALSSFQVATNTTANNIANVKTTGYTRQEATLQA 46 >gi|83594184|ref|YP_427936.1| hypothetical protein Rru_A2852 [Rhodospirillum rubrum ATCC 11170] gi|83577098|gb|ABC23649.1| conserved hypothetical protein [Rhodospirillum rubrum ATCC 11170] Length = 727 Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 9/47 (19%), Positives = 20/47 (42%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50 + + G++ ++ L V+ N++N +T G+ VV Sbjct: 6 ALSAGISGLQTAQKGLDLVSHNLANINTPGYTRKIFNPESVVLNGSG 52 Score = 35.2 bits (79), Expect = 8.1, Method: Composition-based stats. Identities = 13/80 (16%), Positives = 26/80 (32%), Gaps = 1/80 (1%) Query: 157 TMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV-TVKRGFLEDSNANSMYEMGQMIH 215 T G S +N+ + + T T++ E S N E+ Q++ Sbjct: 641 TTGARSFSDYAALTLSQNASEASAVATTVSYQSQLADTLQLKSAEISAVNMDEELSQLLV 700 Query: 216 LTQKFNSITTLIDENEKSML 235 Q + + +I + Sbjct: 701 WEQMYRASAKVISAAADMLD 720 >gi|315121849|ref|YP_004062338.1| flagellar basal body rod protein FlgC [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495251|gb|ADR51850.1| flagellar basal body rod protein FlgC [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 134 Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 10/51 (19%), Positives = 20/51 (39%), Gaps = 7/51 (13%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKN 50 I + R+ +++N++N T G +R + F EV+ Sbjct: 10 IANSGLTVQSSRMHVISENIANARTTGNTAGSDPYRRKTISFEEVMHEGGG 60 Score = 35.6 bits (80), Expect = 6.1, Method: Composition-based stats. Identities = 6/48 (12%), Positives = 18/48 (37%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G ++ N N + E M + + + +I ++ + + + Sbjct: 86 ASGIVKYPNVNVLVETADMRETNRLYMANLQIIKQSRDMIATTLDLLR 133 >gi|91794997|ref|YP_564648.1| flagellar basal-body rod protein FlgC [Shewanella denitrificans OS217] gi|91716999|gb|ABE56925.1| flagellar basal-body rod protein FlgC [Shewanella denitrificans OS217] Length = 139 Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 8/44 (18%), Positives = 22/44 (50%) Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +G++ SN N++ EM M+ ++ F + +++ ++ Sbjct: 92 QGYVAYSNVNTVDEMADMMAASRSFETSVEIMNRARSMQQGLLQ 135 Score = 38.3 bits (87), Expect = 0.95, Method: Composition-based stats. Identities = 17/80 (21%), Positives = 26/80 (32%), Gaps = 6/80 (7%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKISFVA 60 I A A RL+TVA N++N T +R +K F+ V + + S Sbjct: 9 IAGAGMNAQTIRLNTVASNIANAGTAAETPEEAYRALKPVFATVYEQFQQNATSGASVEV 68 Query: 61 SGKEYLSKEVGSFISTGTEL 80 S + Sbjct: 69 MDIVQTSAPLDLRYEPNHPY 88 >gi|13472574|ref|NP_104141.1| flagellar basal body rod protein FlgC [Mesorhizobium loti MAFF303099] gi|14023320|dbj|BAB49927.1| flagellar basal-body rod protein; FlgC [Mesorhizobium loti MAFF303099] Length = 138 Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 9/60 (15%), Positives = 26/60 (43%) Query: 179 PNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 P++ P + + ++G+++ N N + EM M + + + ++ + + I Sbjct: 73 PSVFPVEFQPGNEAADEKGYVKMPNVNVLIEMADMTEANRSYEANLQVVKQARDLISMTI 132 Score = 43.3 bits (100), Expect = 0.026, Method: Composition-based stats. Identities = 13/104 (12%), Positives = 32/104 (30%), Gaps = 8/104 (7%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKF-SEVVGAIKNDIDQK 55 + + + A +RL V++N++N + G +R + F SE+ A + Sbjct: 7 ALKVAASGLGAQSERLRVVSENLANAQSTGTTPGADPYRRKTISFVSELDRASGASTVEV 66 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 S + + + + + + Sbjct: 67 NSIDRDPSVFPVEFQPGNEAADEKGYVKMPNVNVLIEMADMTEA 110 >gi|322806995|emb|CBZ04565.1| flagellar basal-body rod protein FlgC [Clostridium botulinum H04402 065] Length = 67 Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 21/42 (50%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N N + EM M+ + + + T+++ + +A+ Sbjct: 22 GYVSMPNVNVLNEMADMMASVRTYEANVTVMNAEKSMFGKAL 63 >gi|56419751|ref|YP_147069.1| flagellar basal body rod protein FlgB [Geobacillus kaustophilus HTA426] gi|297530609|ref|YP_003671884.1| flagellar basal-body rod protein FlgB [Geobacillus sp. C56-T3] gi|56379593|dbj|BAD75501.1| flagellar basal-body rod protein [Geobacillus kaustophilus HTA426] gi|297253861|gb|ADI27307.1| flagellar basal-body rod protein FlgB [Geobacillus sp. C56-T3] Length = 129 Score = 46.4 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 10/33 (30%), Positives = 16/33 (48%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 R +ADN++N DT G++ V+F Sbjct: 14 GLRYAALRQQAIADNIANADTPGYKAKDVRFQA 46 >gi|307699881|ref|ZP_07636932.1| putative flagellar hook-associated protein FlgK [Mobiluncus mulieris FB024-16] gi|307614919|gb|EFN94137.1| putative flagellar hook-associated protein FlgK [Mobiluncus mulieris FB024-16] Length = 976 Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 20/42 (47%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44 +S N GL A ++ + N+ N +T G+ +V+ + Sbjct: 6 SSLNAGLTGLYAAQRLIEVSGQNIINQNTPGYTRQRVEQKAL 47 Score = 39.9 bits (91), Expect = 0.29, Method: Composition-based stats. Identities = 4/39 (10%), Positives = 11/39 (28%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S+ + E+ +I + + + I Sbjct: 935 QSSVDMNEEVMNLIRGQHAYAGAARITSTVNSMLETLIN 973 >gi|289208120|ref|YP_003460186.1| flagellar hook-associated protein FlgK [Thioalkalivibrio sp. K90mix] gi|288943751|gb|ADC71450.1| flagellar hook-associated protein FlgK [Thioalkalivibrio sp. K90mix] Length = 640 Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 11/48 (22%), Positives = 24/48 (50%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54 IG +A LA ++ + T ++N++N+ T G+ + + + Q Sbjct: 6 IGTSALLAFQRAIGTTSNNIANSATEGYSRQRTELGNLSPQFLGGSYQ 53 >gi|308050026|ref|YP_003913592.1| flagellar basal-body rod protein FlgC [Ferrimonas balearica DSM 9799] gi|307632216|gb|ADN76518.1| flagellar basal-body rod protein FlgC [Ferrimonas balearica DSM 9799] Length = 138 Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 20/43 (46%) Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 +G++ SN N++ EM M+ T+ F + ++ + Sbjct: 91 QGYVTYSNVNTVQEMADMMAATRAFETSVDIMSRARSMQQGLL 133 Score = 35.2 bits (79), Expect = 9.0, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 35/130 (26%), Gaps = 9/130 (6%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKISFVA 60 I +A RL+TVA N++N + +R IK F + +A Sbjct: 9 IAGSAMNVQSIRLNTVASNLANAEAAAPDEASAYRAIKPVFQTLYEQGNGGGVSANVQIA 68 Query: 61 SGKEYLSKEVGSFISTGTELD---FALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSA 117 + + + + + + E + TR V S Sbjct: 69 GVVQSDAPLESRYEPDHPMANEQGYVTYSNVNTVQEMADMMAATRAFETSVDIMSRARSM 128 Query: 118 SGKYPVLDMA 127 L Sbjct: 129 QQGLLKLGGM 138 >gi|251780808|ref|ZP_04823728.1| flagellar basal-body rod protein FlgC [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243085123|gb|EES51013.1| flagellar basal-body rod protein FlgC [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 135 Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 20/42 (47%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N N + EM M+ T+ + + ++ + +A+ Sbjct: 90 GYVTMPNVNVLNEMADMMVSTRSYEANVETLNALKGMFSKAL 131 Score = 37.9 bits (86), Expect = 1.4, Method: Composition-based stats. Identities = 18/107 (16%), Positives = 31/107 (28%), Gaps = 7/107 (6%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTV----G---FRTIKVKFSEVVGAIKNDIDQKI 56 S I A R+ T+ NM+N+ T G + F E + + K Sbjct: 6 SMQISATGISAERLRMDTITSNMTNSSTTRSADGSGPYVRKIAVFQEALDENRKMAGIKP 65 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103 + K + E + + E ++ TR Sbjct: 66 VKIVEDKSPFRRVYKPTDPDADETGYVTMPNVNVLNEMADMMVSTRS 112 >gi|289666044|ref|ZP_06487625.1| flagellar basal body rod protein FlgB [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289670503|ref|ZP_06491578.1| flagellar basal body rod protein FlgB [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 133 Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 26/55 (47%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65 A EQR+ +A N+SN DT G++ + F + + + + D + K Y Sbjct: 15 ALALREQRMKLIASNLSNVDTPGYKAKDLNFEAALKSAQGEQDGGLMQTTDAKHY 69 >gi|317133463|ref|YP_004092777.1| flagellar hook-associated protein FlgK [Ethanoligenens harbinense YUAN-3] gi|315471442|gb|ADU28046.1| flagellar hook-associated protein FlgK [Ethanoligenens harbinense YUAN-3] Length = 548 Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 16/81 (19%), Positives = 24/81 (29%), Gaps = 3/81 (3%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 T N L+ A + L A N+SN T G+ V ++ N + V Sbjct: 5 NTGLNTALSGLSASQTALGVTAHNISNAATDGYSRQMV---DLQAVNVNTGAYQWKPVVP 61 Query: 62 GKEYLSKEVGSFISTGTELDF 82 + LD Sbjct: 62 FVGNGVNSNQITQARDGFLDV 82 Score = 35.2 bits (79), Expect = 7.2, Method: Composition-based stats. Identities = 5/38 (13%), Positives = 13/38 (34%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S+ + E ++ Q + + +I M + Sbjct: 508 SSVSIDEETVNLMKFQQMYGASARVITTINDMMGTLLS 545 >gi|194015655|ref|ZP_03054271.1| flagellar hook-associated protein FlgK [Bacillus pumilus ATCC 7061] gi|194013059|gb|EDW22625.1| flagellar hook-associated protein FlgK [Bacillus pumilus ATCC 7061] Length = 506 Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 7/42 (16%), Positives = 17/42 (40%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S + EM MI +N+ ++ ++ + + I + Sbjct: 461 TSAVSIDEEMTNMIQFQHAYNAAARVVTLQDEILDKVINGMG 502 Score = 42.9 bits (99), Expect = 0.033, Method: Composition-based stats. Identities = 15/107 (14%), Positives = 26/107 (24%), Gaps = 9/107 (8%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE---------VVGAIKNDIDQ 54 A L ++N+SN +T G+ +V F G + Sbjct: 7 GLETAKRGITAQRAGLYVTSNNVSNANTDGYSRQRVTFKADNPYPVISVYDGKTYGQMGT 66 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101 + + S F L + + LT Sbjct: 67 GVQVGTVERIRDSFLDLQFRDHNNNLSYYSTKSDALSQMEGVMNDLT 113 >gi|170722885|ref|YP_001750573.1| flagellar hook-associated protein FlgK [Pseudomonas putida W619] gi|169760888|gb|ACA74204.1| flagellar hook-associated protein FlgK [Pseudomonas putida W619] Length = 682 Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 11/38 (28%), Positives = 20/38 (52%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIK 38 M + NIG++ A + L T +N++N D G+ + Sbjct: 1 MASLINIGMSGLSASQSGLHTTGNNIANADVAGYSRQQ 38 >gi|260466621|ref|ZP_05812809.1| flagellar basal-body rod protein FlgC [Mesorhizobium opportunistum WSM2075] gi|259029627|gb|EEW30915.1| flagellar basal-body rod protein FlgC [Mesorhizobium opportunistum WSM2075] Length = 138 Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 7/42 (16%), Positives = 18/42 (42%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G+++ N N + EM M + + + ++ + + I Sbjct: 91 GYVKMPNVNVLIEMADMTEANRSYEANLQVVKQARDLISMTI 132 Score = 44.5 bits (103), Expect = 0.013, Method: Composition-based stats. Identities = 13/104 (12%), Positives = 34/104 (32%), Gaps = 8/104 (7%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKF-SEVVGAIKNDIDQK 55 + + + A +RL V++N++N + G +R + F SE+ A + + Sbjct: 7 ALKVAASGLGAQSERLRVVSENLANAQSTGTTPGSDPYRRKTISFVSELDRASGSSTVEV 66 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 S ++ + + + + + Sbjct: 67 NSIDRDPSDFPVEFQPGNEAADEKGYVKMPNVNVLIEMADMTEA 110 >gi|206889963|ref|YP_002249841.1| flagellar hook-associated protein FlgK [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741901|gb|ACI20958.1| flagellar hook-associated protein FlgK [Thermodesulfovibrio yellowstonii DSM 11347] Length = 554 Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 24/65 (36%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 F+IG L ++ L V+ N+SN T G+ V F + I + V Sbjct: 7 FDIGKTGVLTYQKALEVVSHNISNAATEGYTRQDVIFQNMSSGILSLSGVTGRGVKLEDI 66 Query: 65 YLSKE 69 + Sbjct: 67 RRMYD 71 Score = 38.7 bits (88), Expect = 0.72, Method: Composition-based stats. Identities = 4/36 (11%), Positives = 13/36 (36%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 S + E +I + + + +I ++ + Sbjct: 514 SGVSLDEEAVNLIKYQKMYEASARVIKVADEILATL 549 >gi|258404735|ref|YP_003197477.1| flagellar hook-associated protein FlgK [Desulfohalobium retbaense DSM 5692] gi|257796962|gb|ACV67899.1| flagellar hook-associated protein FlgK [Desulfohalobium retbaense DSM 5692] Length = 560 Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 11/58 (18%), Positives = 25/58 (43%), Gaps = 1/58 (1%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFV 59 ++ ++G A ++ L V +N+SN T G+ ++ S + ++ V Sbjct: 5 LSALHLGQTGMAASQKALEVVGNNVSNVSTEGYSRQTIE-SSALPTLQRGGLSFGQGV 61 Score = 43.3 bits (100), Expect = 0.026, Method: Composition-based stats. Identities = 27/261 (10%), Positives = 58/261 (22%), Gaps = 27/261 (10%) Query: 3 TSFNIGLAAQLALEQRLST-VADNM----------------SNTDTVGFRTI-KVKFSEV 44 +S + Q L +N + +T G + KV+FS+ Sbjct: 300 SSLIQAVNGQHTQGTDLDGDTGNNFFEPVTHFKSASFGTKTAPANTTGSDSDVKVEFSDG 359 Query: 45 VGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALE------GDAWFALESPRGI 98 D + + GT D+ L + +P Sbjct: 360 TDKSITIPDGTTFEGVAEAINDANVGVKATVAGTSGDYELRIASTDPDTTITTITNPSSN 419 Query: 99 ILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158 + + + G + D G ++K Sbjct: 420 LQSPLLSWTQDGGGGDSGLQLAIENTGDIAAGESDAPGDNRNAQKMAGLKNEKMVNGRYT 479 Query: 159 GLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 + V N ++ E S + M ++ + Sbjct: 480 AIDFYGKVAADVGVAGQQNDFNRSSFQNTVDQLEARRQ---EISGVSINESMIKLQRYQK 536 Query: 219 KFNSITTLIDENEKSMLEAIR 239 F + + ++ M + Sbjct: 537 AFQASAQYLTTADEMMQTLLN 557 >gi|170722895|ref|YP_001750583.1| flagellar basal body rod protein FlgB [Pseudomonas putida W619] gi|169760898|gb|ACA74214.1| flagellar basal-body rod protein FlgB [Pseudomonas putida W619] Length = 136 Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 27/98 (27%), Gaps = 2/98 (2%) Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76 QR +A+N++N DT ++ + FS V+ A F E Sbjct: 21 QRAEVLANNIANADTPNYKARDMDFSSVLAAESQKQQSGGRFAMDRTNSRHIEAEGLAMA 80 Query: 77 GTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSL 114 L + + I + G Sbjct: 81 DDTLQYRTPTQPSIDQNTVDAQI--EQSNYTENAIGFQ 116 >gi|238758104|ref|ZP_04619284.1| hypothetical protein yaldo0001_12400 [Yersinia aldovae ATCC 35236] gi|238703642|gb|EEP96179.1| hypothetical protein yaldo0001_12400 [Yersinia aldovae ATCC 35236] Length = 555 Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 1/44 (2%) Query: 1 MQTSF-NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 M S N ++ A + LSTV++N++N G+ F++ Sbjct: 1 MSNSLMNTAMSGLSAAQYALSTVSNNITNFQVAGYNRQNAIFAQ 44 >gi|227876730|ref|ZP_03994839.1| possible flagellar hook-associated protein FlgK [Mobiluncus mulieris ATCC 35243] gi|269976257|ref|ZP_06183253.1| putative flagellar hook-associated protein FlgK [Mobiluncus mulieris 28-1] gi|227842627|gb|EEJ52827.1| possible flagellar hook-associated protein FlgK [Mobiluncus mulieris ATCC 35243] gi|269935586|gb|EEZ92124.1| putative flagellar hook-associated protein FlgK [Mobiluncus mulieris 28-1] Length = 1034 Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 20/42 (47%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44 +S N GL A ++ + N+ N +T G+ +V+ + Sbjct: 6 SSLNAGLTGLYAAQRLIEVSGQNIINQNTPGYTRQRVEQKAL 47 Score = 39.9 bits (91), Expect = 0.30, Method: Composition-based stats. Identities = 4/39 (10%), Positives = 11/39 (28%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S+ + E+ +I + + + I Sbjct: 993 QSSVDMNEEVMNLIRGQHAYAGAARITSTVNSMLETLIN 1031 >gi|188592114|ref|YP_001796712.1| flagellar basal body rod protein flgb [Cupriavidus taiwanensis LMG 19424] gi|170938488|emb|CAP63475.1| FlgB: Flagellar basal-body rod protein [Cupriavidus taiwanensis LMG 19424] Length = 135 Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 25/75 (33%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR S +A N+++ DT G++ FS + + S Sbjct: 15 ALSLRNQRQSVIASNIAHADTPGYKARDFDFSSTLAQTVERGHRNEGMSLSTTSVRHLPA 74 Query: 71 GSFISTGTELDFALE 85 + +L + + Sbjct: 75 QAPGREEFDLAYRIP 89 >gi|146341929|ref|YP_001206977.1| putative flagellar hook-associated protein FlgK [Bradyrhizobium sp. ORS278] gi|146194735|emb|CAL78760.1| putative flagellar hook-associated protein 1 (HAP1, FlgK protein) [Bradyrhizobium sp. ORS278] Length = 621 Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 11/81 (13%), Positives = 28/81 (34%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 ++ ++ + + LS ++ N++N +T G+ EV Sbjct: 5 SALATAMSGLRSTQAALSIISSNVANANTPGYVAQNPNQIEVASGGFGSTVMTTGVNRQL 64 Query: 63 KEYLSKEVGSFISTGTELDFA 83 ++ ++ + S G D Sbjct: 65 DLFVQNQLRTETSGGAYADQM 85 Score = 36.8 bits (83), Expect = 2.8, Method: Composition-based stats. Identities = 12/73 (16%), Positives = 29/73 (39%) Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 Q FV ++ S + + + + T+K F + N EM +I + + + + Sbjct: 546 QQFVSQQGSASTLATQLSQGQSVVVATLKEKFQSTAGVNMDSEMSNLIQVQNTYAANAHI 605 Query: 227 IDENEKSMLEAIR 239 + + M ++ Sbjct: 606 MSVVQSMMQSLLQ 618 >gi|86157770|ref|YP_464555.1| flagellar hook-associated protein [Anaeromyxobacter dehalogenans 2CP-C] gi|85774281|gb|ABC81118.1| flagellar hook-associated protein [Anaeromyxobacter dehalogenans 2CP-C] Length = 469 Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 5/38 (13%), Positives = 15/38 (39%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S + E+ +M + + +I+ +I + + Sbjct: 429 ASGVSVDEELLEMERAQRAYEAISKVIQATSEMFDTLL 466 Score = 37.2 bits (84), Expect = 2.3, Method: Composition-based stats. Identities = 5/44 (11%), Positives = 15/44 (34%) Query: 23 ADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66 + N+ N +T G+ + + + A + + + Sbjct: 26 SHNLQNANTPGYARQRAVLATTLPAEQAGGAWIGRGASLAQVTQ 69 >gi|332994164|gb|AEF04219.1| flagellar basal-body rod protein FlgC [Alteromonas sp. SN2] Length = 140 Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 20/43 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N + EM M+ ++ + + + D ++ ++ Sbjct: 93 GYIYKPNVNIVEEMANMMSASKAYETNVQVADTTKRIFRRVLQ 135 Score = 37.2 bits (84), Expect = 2.3, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 23/60 (38%), Gaps = 6/60 (10%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56 +I A RL+T A N++N ++V +R F+ + D + + Sbjct: 5 NVMSISSTGMEAENVRLNTTASNIANANSVSSSYDETYRARHPVFAAELQRAMGDQSKGV 64 >gi|168333623|ref|ZP_02691883.1| flagellar hook-associated protein FlgK [Epulopiscium sp. 'N.t. morphotype B'] Length = 578 Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 9/76 (11%), Positives = 19/76 (25%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 ++ A ++ L N++N +T G+ ++ E V G Sbjct: 3 LTTTVSGLTAAQKGLMVTGHNLANINTPGYTRQQLLQHETGYRDVRKYGGYTQQVGMGVS 62 Query: 65 YLSKEVGSFISTGTEL 80 Sbjct: 63 ETEIRQIRDNFADERY 78 >gi|327399356|ref|YP_004340225.1| flagellar basal-body rod protein FlgB [Hippea maritima DSM 10411] gi|327181985|gb|AEA34166.1| flagellar basal-body rod protein FlgB [Hippea maritima DSM 10411] Length = 132 Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 21/42 (50%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 R +A N++N DT ++ + F++++ +ND+ Sbjct: 15 GLDVANLRQDLIASNIANADTPNYKAKHIPFNDILKLRQNDL 56 >gi|254499115|ref|ZP_05111805.1| flagellar basal-body rod protein FlgC [Legionella drancourtii LLAP12] gi|254351654|gb|EET10499.1| flagellar basal-body rod protein FlgC [Legionella drancourtii LLAP12] Length = 140 Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 8/58 (13%), Positives = 25/58 (43%) Query: 182 PPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 P + K+G++ +++ EM ++ ++ + + +I+ L+A+ Sbjct: 78 PSKVYQPGHPAADKQGYVNYPGVSTIDEMTTLLRASRAYEANIKIINSAHSLYLQALS 135 Score = 35.2 bits (79), Expect = 8.4, Method: Composition-based stats. Identities = 7/22 (31%), Positives = 12/22 (54%) Query: 7 IGLAAQLALEQRLSTVADNMSN 28 I A + R+ VA+N++N Sbjct: 9 IASQGMNAEKLRVDVVANNIAN 30 >gi|166712065|ref|ZP_02243272.1| flagellar basal body rod protein FlgB [Xanthomonas oryzae pv. oryzicola BLS256] Length = 133 Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 26/55 (47%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65 A EQR+ +A N+SN DT G++ + F + + + + D + K Y Sbjct: 15 ALALREQRMKLIASNLSNVDTPGYKAKDLNFEAALKSAQGEQDGGLMQTTDAKHY 69 >gi|325291941|ref|YP_004277805.1| flagellar basal body rod protein FlgC [Agrobacterium sp. H13-3] gi|325059794|gb|ADY63485.1| flagellar basal body rod protein FlgC [Agrobacterium sp. H13-3] Length = 139 Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 9/68 (13%), Positives = 24/68 (35%) Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 G+ + + G ++ N N + EM M + +++ +I + + Sbjct: 70 GVDRGDFVHEYDPGNPAADTSGMVKMPNVNVLIEMADMREANRSYDANLQVIRQTRDLVA 129 Query: 236 EAIRNIAS 243 I + + Sbjct: 130 STIDLLKA 137 Score = 40.6 bits (93), Expect = 0.20, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 20/51 (39%), Gaps = 7/51 (13%) Query: 7 IGLAAQLALEQRLSTVADNMSNT----DTVG---FRTIKVKFSEVVGAIKN 50 I + RL V++N++N DT G +R V F + + Sbjct: 10 IAGSGLEVQSTRLRIVSENIANARSTGDTPGADPYRRKTVTFGSELDRVSG 60 >gi|319787123|ref|YP_004146598.1| flagellar basal-body rod protein FlgC [Pseudoxanthomonas suwonensis 11-1] gi|317465635|gb|ADV27367.1| flagellar basal-body rod protein FlgC [Pseudoxanthomonas suwonensis 11-1] Length = 135 Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 19/37 (51%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 G++ + + + +M MI ++ + + +I+ ++ Sbjct: 90 GYVFAPDVDPVSQMVNMISASRSYQAGVEIINTAKEL 126 Score = 36.4 bits (82), Expect = 3.1, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 36/101 (35%), Gaps = 10/101 (9%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKISF 58 F++ +A A RLST+A N++N D V ++ ++ F A + D ++ Sbjct: 7 FDVAGSALQAQSVRLSTIASNLANADAVAGSPEAVYKPLEPVFQ----AQASGSDPALTG 62 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 V + S +G + P + Sbjct: 63 VRVREIAQSDAPPVRRYEPGHPLADADGYVFAPDVDPVSQM 103 >gi|284041506|ref|YP_003391846.1| flagellar basal-body rod protein FlgB [Conexibacter woesei DSM 14684] gi|283945727|gb|ADB48471.1| flagellar basal-body rod protein FlgB [Conexibacter woesei DSM 14684] Length = 117 Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 8/50 (16%), Positives = 20/50 (40%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFV 59 +A R + +N++N +T G++ + F + A + + Sbjct: 13 SALRGSSMRQELLTNNLANINTPGYQRQDLDFHSALQAAQASGNDPTEVT 62 >gi|302392399|ref|YP_003828219.1| flagellar basal-body rod protein FlgB [Acetohalobium arabaticum DSM 5501] gi|302204476|gb|ADL13154.1| flagellar basal-body rod protein FlgB [Acetohalobium arabaticum DSM 5501] Length = 135 Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 12/71 (16%), Positives = 28/71 (39%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 S ++ A L+QR +++N++N DT ++ V F + N+ ++ Sbjct: 7 NQSISVLTKALDGLQQRQEAISNNIANVDTPDYKRKDVNFKSELKTALNNDSTGLTATHK 66 Query: 62 GKEYLSKEVGS 72 + + Sbjct: 67 NHFSTNSNLDQ 77 >gi|238922534|ref|YP_002936047.1| flagellar hook-associated protein FlgK [Eubacterium rectale ATCC 33656] gi|238874206|gb|ACR73913.1| flagellar hook-associated protein FlgK [Eubacterium rectale ATCC 33656] Length = 617 Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 9/40 (22%), Positives = 19/40 (47%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 +IG +A + + +T A+N++N T G+ + Sbjct: 7 GLHIGSSALSSFQVATNTTANNIANVKTTGYTRQEATLQA 46 >gi|219684499|ref|ZP_03539442.1| flagellar hook-associated protein FlgK [Borrelia garinii PBr] gi|219671861|gb|EED28915.1| flagellar hook-associated protein FlgK [Borrelia garinii PBr] Length = 627 Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 16/41 (39%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E+ MI Q F + + I + + + I + Sbjct: 586 SGVNKDEELANMIEFQQAFIAASKFITVSAELIDTVINKMG 626 Score = 35.2 bits (79), Expect = 7.4, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 19/46 (41%), Gaps = 3/46 (6%) Query: 1 MQT---SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 M + IG + A + ++TV N+SN G+ +V Sbjct: 1 MDSTFSGIEIGKRSLFAHKDAMNTVGHNLSNATKPGYSRQRVIMKT 46 >gi|58582192|ref|YP_201208.1| flagellar basal body rod protein FlgB [Xanthomonas oryzae pv. oryzae KACC10331] gi|84624085|ref|YP_451457.1| flagellar basal body rod protein FlgB [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|58426786|gb|AAW75823.1| flagellar protein [Xanthomonas oryzae pv. oryzae KACC10331] gi|84368025|dbj|BAE69183.1| flagellar protein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 132 Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 26/55 (47%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65 A EQR+ +A N+SN DT G++ + F + + + + D + K Y Sbjct: 15 ALALREQRMKLIASNLSNVDTPGYKAKDLNFEAALKSAQGEQDGGLMQTTDAKHY 69 >gi|219685806|ref|ZP_03540615.1| flagellar hook-associated protein FlgK [Borrelia garinii Far04] gi|219672639|gb|EED29669.1| flagellar hook-associated protein FlgK [Borrelia garinii Far04] Length = 627 Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 16/41 (39%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E+ MI Q F + + I + + + I + Sbjct: 586 SGVNKDEELANMIEFQQAFIAASKFITVSAELIDTVINKMG 626 Score = 35.6 bits (80), Expect = 6.0, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 19/46 (41%), Gaps = 3/46 (6%) Query: 1 MQT---SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 M + IG + A + ++TV N+SN G+ +V Sbjct: 1 MDSTFSGIEIGKRSLFAHKDAMNTVGHNLSNATKPGYSRQRVTMKT 46 >gi|111115003|ref|YP_709621.1| flagellar hook-associated protein FlgK [Borrelia afzelii PKo] gi|110890277|gb|ABH01445.1| flagellar hook-associated protein [Borrelia afzelii PKo] Length = 627 Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 16/41 (39%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E+ MI Q F + + I + + + I + Sbjct: 586 SGVNKDEELANMIEFQQAFIAASKFITVSAELIDTVINKMG 626 Score = 36.8 bits (83), Expect = 2.9, Method: Composition-based stats. Identities = 11/57 (19%), Positives = 23/57 (40%), Gaps = 3/57 (5%) Query: 1 MQT---SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54 M + IG + A + ++TV N+SN G+ +V + +++ Sbjct: 1 MDSTFSGIEIGKRSLFAHKDAMNTVGHNLSNATKPGYSRQRVTMKTAIPLYAPQLNR 57 >gi|49077262|gb|AAT49657.1| PA1077 [synthetic construct] Length = 136 Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 29/76 (38%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + I A QR +A+N++N DT ++ + F+ V+ K+ + + Sbjct: 6 DRALGIHQQALSFRAQRAEVLANNLANADTPNYKARDLDFAAVLAEQKDKAAKGTFATRT 65 Query: 62 GKEYLSKEVGSFISTG 77 E G + G Sbjct: 66 TNERHIAAEGFGMGEG 81 >gi|322832570|ref|YP_004212597.1| flagellar hook-associated protein FlgK [Rahnella sp. Y9602] gi|321167771|gb|ADW73470.1| flagellar hook-associated protein FlgK [Rahnella sp. Y9602] Length = 550 Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 18/40 (45%), Gaps = 1/40 (2%) Query: 1 MQTSF-NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39 M +S N ++ A + LST +N++N G+ Sbjct: 1 MSSSLINTAMSGLNAAQAALSTTGNNIANVSVAGYNRQTA 40 >gi|288573036|ref|ZP_06391393.1| flagellar basal-body rod protein FlgB [Dethiosulfovibrio peptidovorans DSM 11002] gi|288568777|gb|EFC90334.1| flagellar basal-body rod protein FlgB [Dethiosulfovibrio peptidovorans DSM 11002] Length = 131 Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 22/60 (36%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 L R +V N++N +T G+ +V F + + I N + K + Sbjct: 13 LQGLAHRFRSVGQNLANANTPGYARREVSFEDQLDDIVNGPKRLPMATTDPKHMTTHARS 72 >gi|319781683|ref|YP_004141159.1| flagellar basal-body rod protein FlgC [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167571|gb|ADV11109.1| flagellar basal-body rod protein FlgC [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 138 Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 7/42 (16%), Positives = 18/42 (42%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G+++ N N + EM M + + + ++ + + I Sbjct: 91 GYVKMPNVNVLIEMADMTEANRSYEANLQVVKQARDLISMTI 132 Score = 44.1 bits (102), Expect = 0.017, Method: Composition-based stats. Identities = 13/104 (12%), Positives = 33/104 (31%), Gaps = 8/104 (7%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKF-SEVVGAIKNDIDQK 55 + + + A +RL V++N++N + G +R + F SE+ A + Sbjct: 7 ALKVAASGLGAQSERLRVVSENLANAQSTGTAPGSDPYRRKTISFVSELDRASGSSTVAV 66 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 S ++ + + + + + Sbjct: 67 NSIDRDPSDFPVEFQPGNEAADEKGYVKMPNVNVLIEMADMTEA 110 >gi|216263829|ref|ZP_03435823.1| flagellar hook-associated protein FlgK [Borrelia afzelii ACA-1] gi|215979873|gb|EEC20695.1| flagellar hook-associated protein FlgK [Borrelia afzelii ACA-1] Length = 627 Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 16/41 (39%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E+ MI Q F + + I + + + I + Sbjct: 586 SGVNKDEELANMIEFQQAFIAASKFITVSAELIDTVINKMG 626 Score = 36.8 bits (83), Expect = 3.1, Method: Composition-based stats. Identities = 11/57 (19%), Positives = 23/57 (40%), Gaps = 3/57 (5%) Query: 1 MQT---SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54 M + IG + A + ++TV N+SN G+ +V + +++ Sbjct: 1 MDSTFSGIEIGKRSLFAHKDAMNTVGHNLSNATKPGYSRQRVTMKTAIPLYAPQLNR 57 >gi|116049015|ref|YP_792183.1| flagellar hook-associated protein FlgK [Pseudomonas aeruginosa UCBPP-PA14] gi|115584236|gb|ABJ10251.1| flagellar hook-associated protein 1 FlgK [Pseudomonas aeruginosa UCBPP-PA14] Length = 683 Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 10/52 (19%), Positives = 17/52 (32%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M +IGL+ + L+ N++N T G+ V Sbjct: 1 MSDLLSIGLSGLGTSQTWLTITGHNITNVKTPGYSRQDAIQQTQVPQFSGAG 52 >gi|255017933|ref|ZP_05290059.1| flagellar basal body rod protein FlgB [Listeria monocytogenes FSL F2-515] Length = 96 Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 10/45 (22%), Positives = 20/45 (44%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56 L+ V++N++N +T F+ + F E +G+ Q Sbjct: 1 MNYLQTANQVVSNNIANANTPNFKASEASFEESLGSSLRASGQNS 45 >gi|224532252|ref|ZP_03672884.1| flagellar hook-associated protein FlgK [Borrelia valaisiana VS116] gi|224511717|gb|EEF82123.1| flagellar hook-associated protein FlgK [Borrelia valaisiana VS116] Length = 627 Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 16/41 (39%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E+ MI Q F + + I + + + I + Sbjct: 586 SGVNKDEELANMIEFQQAFIAASKFITVSAELIDTVINKMG 626 Score = 35.6 bits (80), Expect = 6.0, Method: Composition-based stats. Identities = 12/83 (14%), Positives = 27/83 (32%), Gaps = 3/83 (3%) Query: 1 MQT---SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS 57 M + IG + A + ++TV N+SN G+ +V +++ Sbjct: 1 MDSTFSGIEIGKRSLFAHKDAMNTVGHNLSNATKPGYSRQRVTMKTTTPLYAPQLNRAKK 60 Query: 58 FVASGKEYLSKEVGSFISTGTEL 80 G+ + + + Sbjct: 61 QGQLGQGIMVQSIDRVKDELLNT 83 >gi|15596274|ref|NP_249768.1| flagellar basal body rod protein FlgB [Pseudomonas aeruginosa PAO1] gi|107100522|ref|ZP_01364440.1| hypothetical protein PaerPA_01001547 [Pseudomonas aeruginosa PACS2] gi|116049006|ref|YP_792192.1| flagellar basal body rod protein FlgB [Pseudomonas aeruginosa UCBPP-PA14] gi|218892959|ref|YP_002441828.1| flagellar basal body rod protein FlgB [Pseudomonas aeruginosa LESB58] gi|254234213|ref|ZP_04927536.1| flagellar basal-body rod protein FlgB [Pseudomonas aeruginosa C3719] gi|254239435|ref|ZP_04932757.1| flagellar basal-body rod protein FlgB [Pseudomonas aeruginosa 2192] gi|296390559|ref|ZP_06880034.1| flagellar basal body rod protein FlgB [Pseudomonas aeruginosa PAb1] gi|313106032|ref|ZP_07792291.1| flagellar basal-body rod protein FlgB [Pseudomonas aeruginosa 39016] gi|9946993|gb|AAG04466.1|AE004539_8 flagellar basal-body rod protein FlgB [Pseudomonas aeruginosa PAO1] gi|115584227|gb|ABJ10242.1| flagellar basal-body rod protein FlgB [Pseudomonas aeruginosa UCBPP-PA14] gi|126166144|gb|EAZ51655.1| flagellar basal-body rod protein FlgB [Pseudomonas aeruginosa C3719] gi|126192813|gb|EAZ56876.1| flagellar basal-body rod protein FlgB [Pseudomonas aeruginosa 2192] gi|218773187|emb|CAW28999.1| flagellar basal-body rod protein FlgB [Pseudomonas aeruginosa LESB58] gi|310878793|gb|EFQ37387.1| flagellar basal-body rod protein FlgB [Pseudomonas aeruginosa 39016] Length = 135 Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 29/76 (38%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + I A QR +A+N++N DT ++ + F+ V+ K+ + + Sbjct: 6 DRALGIHQQALSFRAQRAEVLANNLANADTPNYKARDLDFAAVLAEQKDKAAKGTFATRT 65 Query: 62 GKEYLSKEVGSFISTG 77 E G + G Sbjct: 66 TNERHIAAEGFGMGEG 81 >gi|56964036|ref|YP_175767.1| flagellar basal body rod protein FlgC [Bacillus clausii KSM-K16] gi|56910279|dbj|BAD64806.1| flagellar basal-body rod protein FlgC [Bacillus clausii KSM-K16] Length = 148 Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 7/42 (16%), Positives = 20/42 (47%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N EM + T+ + + T + ++ +++A+ Sbjct: 103 GYVSKPNVEIAREMVDITSATRSYEANVTALQASKGMVMKAL 144 Score = 44.9 bits (104), Expect = 0.009, Method: Composition-based stats. Identities = 17/100 (17%), Positives = 31/100 (31%), Gaps = 10/100 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M +S N+ + R+ A N++N DT R +V + V Sbjct: 3 MFSSMNVSGSGLTLQRLRMDVAASNIANADTT--RAERVN--------GEWQPYQRRMVV 52 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL 100 G + + ELD + +P ++ Sbjct: 53 QGPTSMGRFSSDLQKATAELDQGVVAKQIVRDPTPATLVY 92 >gi|303327773|ref|ZP_07358213.1| putative flagellar basal-body rod protein [Desulfovibrio sp. 3_1_syn3] gi|302862134|gb|EFL85068.1| putative flagellar basal-body rod protein [Desulfovibrio sp. 3_1_syn3] Length = 133 Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 15/103 (14%), Positives = 33/103 (32%), Gaps = 1/103 (0%) Query: 137 DEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN-IPPTPLEDLSGVTVK 195 + NV G Q G V + +G P + P + +++ Sbjct: 27 HNVANVNTAGFAPQHAVYATGPGGRGVRLDAVLQDSGVAGRLPAEVRNNPAVSTAPASME 86 Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 F+ + EM QMI + + + ++ + + + Sbjct: 87 SDFVNPGGTDLGREMTQMISTQRTYEANAQVVRTGDAMLGTLL 129 Score = 44.9 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 34/104 (32%), Gaps = 4/104 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID----QKISFV 59 S N+G +A A ++ A N++N +T GF ++ G +D Sbjct: 7 SMNLGASAMNAHSWGMAVTAHNVANVNTAGFAPQHAVYATGPGGRGVRLDAVLQDSGVAG 66 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103 E + S E DF G E + I R Sbjct: 67 RLPAEVRNNPAVSTAPASMESDFVNPGGTDLGREMTQMISTQRT 110 >gi|94263245|ref|ZP_01287062.1| Flagellar basal-body rod protein FlgC [delta proteobacterium MLMS-1] gi|93456463|gb|EAT06583.1| Flagellar basal-body rod protein FlgC [delta proteobacterium MLMS-1] Length = 144 Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 20/42 (47%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G + N N+ +M M++ + + + +D ++ L A+ Sbjct: 99 GIVRYPNVNTAEQMVDMMNARRSYEANVAALDAVKEMALRAL 140 Score = 38.7 bits (88), Expect = 0.73, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 8/51 (15%) Query: 1 MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43 M T+ NI +A A RL+ + NM+N +T G +R V F Sbjct: 1 MDILTAMNISGSALKAERSRLNIASMNMANANTTRTVEGGPYRAKSVVFEA 51 >gi|90423029|ref|YP_531399.1| flagellar basal body rod protein FlgC [Rhodopseudomonas palustris BisB18] gi|90105043|gb|ABD87080.1| flagellar basal-body rod protein FlgC [Rhodopseudomonas palustris BisB18] Length = 141 Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 8/58 (13%), Positives = 21/58 (36%) Query: 186 LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 E + G ++ N N + EM M + + + +I + + + + + Sbjct: 84 YEPGNPAADAAGNVKYPNVNPLVEMTDMRDAQRSYEANLNIISATRRMIQRTLDILKA 141 Score = 44.9 bits (104), Expect = 0.010, Method: Composition-based stats. Identities = 11/59 (18%), Positives = 22/59 (37%), Gaps = 9/59 (15%) Query: 1 MQ--TSFNIGLAAQLALEQRLSTVADNMSN----TDTVG---FRTIKVKFSEVVGAIKN 50 M S I + A R+ +++N++N T G +R F+ + + Sbjct: 6 MDFSRSMGIATSGLRAQAARMRVISENIANAESTAQTPGGDPYRRKVPTFTSALDRALD 64 >gi|114330367|ref|YP_746589.1| flagellar hook-associated protein FlgK [Nitrosomonas eutropha C91] gi|114307381|gb|ABI58624.1| flagellar hook-associated protein FlgK [Nitrosomonas eutropha C91] Length = 467 Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Query: 1 MQTS-FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39 M S N+G++ A + L T + N+SN T G+ + Sbjct: 1 MANSIMNVGVSGLQAAQTALLTTSHNISNATTPGYNRQQA 40 >gi|251772404|gb|EES52971.1| flagellar hook-associated protein FlgK [Leptospirillum ferrodiazotrophum] Length = 559 Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 27/76 (35%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 NIG A E L T N+SN +T G+ +V + V + + A+ Sbjct: 8 MNIGQTGIEANEAALKTAGHNLSNVNTPGYSRERVMLEQHVPDMGHPGMMGAGVDAARIR 67 Query: 65 YLSKEVGSFISTGTEL 80 + ST + Sbjct: 68 RVVNHFLENQSTRQKT 83 >gi|227328344|ref|ZP_03832368.1| flagellar hook-associated protein FlgK [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 564 Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 13/74 (17%), Positives = 29/74 (39%), Gaps = 2/74 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA--IKNDIDQKISF 58 M N ++ + LSTV++N+SN +G+ + + + I ++ Sbjct: 1 MSNLINTAMSGLKGAQVALSTVSNNISNQAVIGYSRQNAILEQAISSSTSAGYIGNGVNV 60 Query: 59 VASGKEYLSKEVGS 72 V+ ++Y Sbjct: 61 VSINRQYNEFITNQ 74 >gi|116694216|ref|YP_728427.1| flagellar basal body rod protein FlgB [Ralstonia eutropha H16] gi|113528715|emb|CAJ95062.1| flagellar basal body protein [Ralstonia eutropha H16] Length = 135 Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 25/75 (33%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR S +A N+++ DT G++ FS + + S Sbjct: 15 ALSLRNQRQSVIASNIAHADTPGYKARDFDFSSTLAQSVERGHRNEGMSLSTTSVRHLPA 74 Query: 71 GSFISTGTELDFALE 85 + +L + + Sbjct: 75 QAPGREEFDLAYRIP 89 >gi|103488385|ref|YP_617946.1| flagellar basal-body rod protein FlgC [Sphingopyxis alaskensis RB2256] gi|98978462|gb|ABF54613.1| flagellar basal-body rod protein FlgC [Sphingopyxis alaskensis RB2256] Length = 267 Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 26/117 (22%), Positives = 42/117 (35%), Gaps = 9/117 (7%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVV---GAIKNDIDQK 55 F+I A A RL+T A N++N TV FR++K F V+ G IDQ Sbjct: 141 FDISGRAMSAQLVRLNTTASNLANAGTVAGSEAGAFRSLKPVFRTVMDDHGRATVQIDQI 200 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDG 112 + + + + G + A++ A + + T G Sbjct: 201 TTSKMAPSKRHDPSNPLADADGNVWEAAVDSAAELVEMVETARQYQNNVQVLETAKG 257 Score = 42.5 bits (98), Expect = 0.055, Method: Composition-based stats. Identities = 5/36 (13%), Positives = 19/36 (52%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +S E+ +M+ +++ + +++ + + E +R Sbjct: 229 VDSAAELVEMVETARQYQNNVQVLETAKGLINETLR 264 >gi|261420582|ref|YP_003254264.1| flagellar hook-associated protein FlgK [Geobacillus sp. Y412MC61] gi|319768252|ref|YP_004133753.1| flagellar hook-associated protein FlgK [Geobacillus sp. Y412MC52] gi|261377039|gb|ACX79782.1| flagellar hook-associated protein FlgK [Geobacillus sp. Y412MC61] gi|317113118|gb|ADU95610.1| flagellar hook-associated protein FlgK [Geobacillus sp. Y412MC52] Length = 531 Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 11/68 (16%), Positives = 26/68 (38%), Gaps = 3/68 (4%) Query: 1 MQTSFN---IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS 57 M ++F+ +A + L T + N++N +T G+ +V+ +++ Sbjct: 1 MLSTFHGLEAARRGMMAQQAALYTTSHNIANANTEGYTRQRVQLQPTPPFPTPGLNRPNI 60 Query: 58 FVASGKEY 65 G Sbjct: 61 PGQMGTGV 68 Score = 44.5 bits (103), Expect = 0.013, Method: Composition-based stats. Identities = 7/41 (17%), Positives = 17/41 (41%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S+ + EM M+ +N+ I ++ + + I + Sbjct: 487 SSVSLDEEMMNMVKFQHAYNAAARQITVIDEMLDKLINGMG 527 >gi|144899352|emb|CAM76216.1| Flagellar hook-associated protein [Magnetospirillum gryphiswaldense MSR-1] Length = 939 Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 19/40 (47%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 N L+ L ++ L TVA N++N +T G+ + Sbjct: 6 GLNTALSGLLTNQRALDTVAQNVTNVNTKGYVRKVMNQES 45 Score = 39.5 bits (90), Expect = 0.42, Method: Composition-based stats. Identities = 7/37 (18%), Positives = 15/37 (40%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N E+ MI Q +++ +I ++ + Sbjct: 899 SGVNLDEEVSAMIDFQQAYSATAKVITVLQEMLETLT 935 >gi|85716543|ref|ZP_01047513.1| flagellar basal body rod protein [Nitrobacter sp. Nb-311A] gi|85696544|gb|EAQ34432.1| flagellar basal body rod protein [Nitrobacter sp. Nb-311A] Length = 141 Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 23/56 (41%), Gaps = 7/56 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTD----TVG---FRTIKVKFSEVVGAIKN 50 S +I + A R+ +++N++N D T G +R FS + + Sbjct: 9 MRSMSIATSGLRAQAGRMRVISENIANVDSTAQTPGGDPYRRKVPTFSSALDRTLD 64 Score = 44.5 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 9/49 (18%), Positives = 21/49 (42%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G ++ N NS+ EM M + + + + +I + + + + S Sbjct: 93 ASGNVKYPNVNSLVEMTDMRNAQRSYEANLNIISATRRMIQRTLDILKS 141 >gi|326204629|ref|ZP_08194485.1| flagellar basal-body rod protein FlgB [Clostridium papyrosolvens DSM 2782] gi|325985196|gb|EGD46036.1| flagellar basal-body rod protein FlgB [Clostridium papyrosolvens DSM 2782] Length = 137 Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 11/83 (13%), Positives = 27/83 (32%), Gaps = 5/83 (6%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN-----DIDQKISFVASGKEY 65 + A R ++ N++N DT ++ V F E + + + + Sbjct: 15 SLNASWARNEVISQNLANVDTPNYKRKDVTFEEYLNDSLDSKRLEGNTTDERHIPIKSKN 74 Query: 66 LSKEVGSFISTGTELDFALEGDA 88 K ++ ++G+ Sbjct: 75 TDKIKPEITQDNSDTSMRIDGNN 97 >gi|152997584|ref|YP_001342419.1| flagellar basal-body rod protein FlgC [Marinomonas sp. MWYL1] gi|150838508|gb|ABR72484.1| flagellar basal-body rod protein FlgC [Marinomonas sp. MWYL1] Length = 151 Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N M EM M+ ++ F + +++ + M + + Sbjct: 105 GYVFYPNVNPMEEMADMMSASRSFQTNVEIMNSAKSMMQKMLT 147 >gi|54307268|ref|YP_128288.1| FlgC flagellar basal-body rod protein [Photobacterium profundum SS9] gi|46911688|emb|CAG18486.1| Hypothetical FlgC flagellar basal-body rod protein [Photobacterium profundum SS9] Length = 138 Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 10/46 (21%), Positives = 23/46 (50%), Gaps = 1/46 (2%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G++ S N + EM M+ ++ F + ++ +SM ++I + Sbjct: 92 GYVFHSTVNVVEEMADMMAASRNFETNVNVMSRA-RSMQQSILRLG 136 Score = 39.5 bits (90), Expect = 0.45, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 28/77 (36%), Gaps = 6/77 (7%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDT------VGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 I +A A RL+TVA N++N D G+ + FS V+ + + + + Sbjct: 9 IAGSAMSAQTIRLNTVASNLANADVVSGSDKTGYHAKRPVFSTVMIDMDSPVPGAKVQID 68 Query: 61 SGKEYLSKEVGSFISTG 77 E + Sbjct: 69 DVIESTEPLRRRYEPNH 85 >gi|37360906|dbj|BAC98360.1| flagellar hook protein [Burkholderia glumae] Length = 40 Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 4/39 (10%), Positives = 13/39 (33%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +S + E+ +I + + + I + + Sbjct: 1 NSTVDLTGELVNLITAQRNYQANAQTIKTQQTVDQTLLN 39 >gi|188576753|ref|YP_001913682.1| flagellar basal body rod protein FlgB [Xanthomonas oryzae pv. oryzae PXO99A] gi|188576944|ref|YP_001913873.1| flagellar basal body rod protein FlgB [Xanthomonas oryzae pv. oryzae PXO99A] gi|188521205|gb|ACD59150.1| flagellar basal-body rod protein FlgB [Xanthomonas oryzae pv. oryzae PXO99A] gi|188521396|gb|ACD59341.1| flagellar basal-body rod protein FlgB [Xanthomonas oryzae pv. oryzae PXO99A] Length = 117 Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 25/54 (46%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65 EQR+ +A N+SN DT G++ + F + + + + D + K Y Sbjct: 1 MALREQRMKLIASNLSNVDTPGYKAKDLNFEAALKSAQGEQDGGLMQTTDAKHY 54 >gi|330809235|ref|YP_004353697.1| flagellar basal-body rod protein flgC [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327377343|gb|AEA68693.1| Putative Flagellar basal-body rod protein flgC [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 131 Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 10/87 (11%), Positives = 29/87 (33%) Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEM 210 + +++ S G + + + E + + G + N + EM Sbjct: 40 RSPLLSVSPPTSFAGQLGLQQPRVHAQARSDSRLVHEPSHPMADQNGMVHYPNIEAAREM 99 Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEA 237 ++ T+ + + + + L+A Sbjct: 100 ATLVSATRAYEANIRSYNSLREMTLKA 126 >gi|188590422|ref|YP_001920200.1| flagellar basal body rod protein FlgC [Clostridium botulinum E3 str. Alaska E43] gi|188500703|gb|ACD53839.1| flagellar basal-body rod protein FlgC [Clostridium botulinum E3 str. Alaska E43] Length = 135 Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 20/42 (47%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N N + EM M+ T+ + + ++ + +A+ Sbjct: 90 GYVTMPNVNVLNEMADMMVSTRSYEANVETLNALKGMFSKAL 131 Score = 38.3 bits (87), Expect = 0.94, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 32/107 (29%), Gaps = 7/107 (6%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTV----G---FRTIKVKFSEVVGAIKNDIDQKI 56 S I A R+ T+ NM+N T G + F E + + K Sbjct: 6 SMQISATGISAERLRMDTITSNMTNASTTRSADGSGPYVRKIAVFQEALDENRKMAGIKP 65 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103 + + K L K E + + E ++ TR Sbjct: 66 AKIVEDKSPLRKVYNPTHPDADETGYVTMPNVNVLNEMADMMVSTRS 112 >gi|71907892|ref|YP_285479.1| flagellar basal-body rod protein FlgB [Dechloromonas aromatica RCB] gi|71847513|gb|AAZ47009.1| Flagellar basal-body rod protein FlgB [Dechloromonas aromatica RCB] Length = 153 Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 29/78 (37%), Gaps = 2/78 (2%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A Q+L +A N++N DT G++ + + F E + ++ + +A+ Sbjct: 33 GVRAYRQQL--IASNIANADTPGYKAVDIDFEEAMRIAQSASPIPPTMLATTSIGHISGE 90 Query: 71 GSFISTGTELDFALEGDA 88 L + + Sbjct: 91 AVSAQPPYPLKYQVPSQD 108 >gi|325289234|ref|YP_004265415.1| flagellar hook-associated protein FlgK [Syntrophobotulus glycolicus DSM 8271] gi|324964635|gb|ADY55414.1| flagellar hook-associated protein FlgK [Syntrophobotulus glycolicus DSM 8271] Length = 507 Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 9/50 (18%), Positives = 18/50 (36%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 + + +L+T N+SN DT G+ +V ++ Sbjct: 7 GIATATSGLSVSQSQLNTTGHNISNADTAGYVRQQVVQTDASYLKSGQYQ 56 Score = 36.8 bits (83), Expect = 2.9, Method: Composition-based stats. Identities = 4/41 (9%), Positives = 14/41 (34%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S + E+ ++ +N+ ++ + + I Sbjct: 463 SAVSMDEELANLLKYQHAYNASARVMSMIDGMLGRLIEETG 503 >gi|187918168|ref|YP_001883731.1| flagellar basal body rod protein FlgB [Borrelia hermsii DAH] gi|119861016|gb|AAX16811.1| flagellar basal-body rod protein FlgB [Borrelia hermsii DAH] Length = 135 Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 13/32 (40%), Positives = 17/32 (53%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 L R S +ADN++N DT F+ KV F Sbjct: 15 LDVLSLRQSVIADNIANVDTPNFKRSKVTFEA 46 >gi|167770223|ref|ZP_02442276.1| hypothetical protein ANACOL_01566 [Anaerotruncus colihominis DSM 17241] gi|167667545|gb|EDS11675.1| hypothetical protein ANACOL_01566 [Anaerotruncus colihominis DSM 17241] Length = 120 Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 10/82 (12%), Positives = 25/82 (30%), Gaps = 1/82 (1%) Query: 2 QTSFNIGL-AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 + + ++ L + + N++N +T G++ VKF +V+ Sbjct: 4 DSLAFQAMRSSLNGLAIEQNIILHNLANYETPGYKAKSVKFEDVLKESSRKDGSGRYDFK 63 Query: 61 SGKEYLSKEVGSFISTGTELDF 82 + + D Sbjct: 64 ATVFEQEDTTMRPDGNNVDSDV 85 >gi|291288219|ref|YP_003505035.1| flagellar basal-body rod protein FlgB [Denitrovibrio acetiphilus DSM 12809] gi|290885379|gb|ADD69079.1| flagellar basal-body rod protein FlgB [Denitrovibrio acetiphilus DSM 12809] Length = 136 Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 11/72 (15%), Positives = 27/72 (37%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 + + +A+N++N DT G++ ++F +V+ + + + K Sbjct: 10 IDTLATGLRTASVKNGVIAENIANKDTPGYKAQDLEFYDVMDEVLGTGKKLPLTRTNEKH 69 Query: 65 YLSKEVGSFIST 76 G S+ Sbjct: 70 LPPAGRGVDPSS 81 >gi|254475034|ref|ZP_05088420.1| flagellar hook-associated protein FlgK [Ruegeria sp. R11] gi|214029277|gb|EEB70112.1| flagellar hook-associated protein FlgK [Ruegeria sp. R11] Length = 482 Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 9/38 (23%), Positives = 20/38 (52%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 ++ N ++ A ++ S V++N++N T G+ V Sbjct: 5 SALNSAMSGLTAAGRQTSVVSENLANVLTPGYSRRSVA 42 Score = 42.5 bits (98), Expect = 0.047, Method: Composition-based stats. Identities = 11/85 (12%), Positives = 30/85 (35%), Gaps = 1/85 (1%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMI 214 + T L + +S + R + +++ L +S E+ +I Sbjct: 398 LGTANLDASTLSANLLSRFAQSEYSAQQNVAFAQATHTEMQQRQLAQG-VDSDAELQNLI 456 Query: 215 HLTQKFNSITTLIDENEKSMLEAIR 239 + + + + +I ++ M +R Sbjct: 457 VIEKVYQANARMISVVDELMETLLR 481 >gi|126176158|ref|YP_001052307.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS155] gi|304412510|ref|ZP_07394116.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS183] gi|307307169|ref|ZP_07586907.1| flagellar basal-body rod protein FlgC [Shewanella baltica BA175] gi|125999363|gb|ABN63438.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS155] gi|304349152|gb|EFM13564.1| flagellar basal-body rod protein FlgC [Shewanella baltica OS183] gi|306910408|gb|EFN40839.1| flagellar basal-body rod protein FlgC [Shewanella baltica BA175] Length = 138 Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 8/44 (18%), Positives = 22/44 (50%) Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +G++ SN N++ EM M+ ++ F + +++ ++ Sbjct: 91 QGYVAYSNVNTIEEMADMMAASRSFETSVEIMNRARSMQQGLLQ 134 Score = 36.8 bits (83), Expect = 2.5, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 6/52 (11%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDI 52 I A A RL+TVA N++N T +R +K F+ + + + Sbjct: 9 IAGAGMNAQTIRLNTVASNLANAGTAAENPESAYRALKPVFATIYDSTQQGA 60 >gi|157693942|ref|YP_001488404.1| flagellar hook-associated protein FlgK [Bacillus pumilus SAFR-032] gi|157682700|gb|ABV63844.1| flagellar hook-associated protein 1 [Bacillus pumilus SAFR-032] Length = 506 Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 7/42 (16%), Positives = 17/42 (40%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S + EM MI +N+ ++ ++ + + I + Sbjct: 461 TSAVSIDEEMTNMIQFQHAYNAAARVVTLQDEILDKVINGMG 502 Score = 42.5 bits (98), Expect = 0.044, Method: Composition-based stats. Identities = 15/107 (14%), Positives = 26/107 (24%), Gaps = 9/107 (8%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE---------VVGAIKNDIDQ 54 A L ++N+SN +T G+ +V F G + Sbjct: 7 GLETAKRGITAQRAGLYVTSNNVSNANTDGYSRQRVTFKAENPYPVISVYDGKTYGQMGT 66 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101 + + S F L + + LT Sbjct: 67 GVQVGTVERIRDSFLDLQFRDHNNNLSYYSAKSDALSQMEGVMNDLT 113 >gi|114765223|ref|ZP_01444355.1| flagellar basal-body rod protein C [Pelagibaca bermudensis HTCC2601] gi|114542358|gb|EAU45386.1| flagellar basal-body rod protein C [Roseovarius sp. HTCC2601] Length = 136 Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 12/79 (15%), Positives = 26/79 (32%), Gaps = 7/79 (8%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQKIS 57 ++ + A +RL V++N++N + G +R + F E+V ++ Sbjct: 8 LSVAASGMRAQGERLKVVSENVANASSTGNSNGEDPYRRKIISFQEMVDRDSGASMVEVD 67 Query: 58 FVASGKEYLSKEVGSFIST 76 V Sbjct: 68 GVRRDDADFQLNYDPSHPA 86 Score = 43.3 bits (100), Expect = 0.028, Method: Composition-based stats. Identities = 14/119 (11%), Positives = 35/119 (29%) Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 + + GE + K+I+ + D V + Sbjct: 14 GMRAQGERLKVVSENVANASSTGNSNGEDPYRRKIISFQEMVDRDSGASMVEVDGVRRDD 73 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 + + GF++ SN N++ EM M ++ + + + + + + Sbjct: 74 ADFQLNYDPSHPAADEDGFVKVSNVNTILEMSNMREASRSYQANLNMFETGRSMRSQLL 132 >gi|85058017|ref|YP_453719.1| flagellar hook-associated protein 1 FlgK [Sodalis glossinidius str. 'morsitans'] gi|84778537|dbj|BAE73314.1| flagellar hook-associated protein 1 FlgK [Sodalis glossinidius str. 'morsitans'] Length = 556 Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 7/37 (18%), Positives = 15/37 (40%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTI 37 M + I + +Q LS + +N++N + Sbjct: 1 MLNLYYIASSGLQTGQQALSVIGNNLANATNPYYSRQ 37 >gi|160903120|ref|YP_001568701.1| flagellar basal-body rod protein FlgB [Petrotoga mobilis SJ95] gi|160360764|gb|ABX32378.1| flagellar basal-body rod protein FlgB [Petrotoga mobilis SJ95] Length = 133 Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 12/70 (17%), Positives = 27/70 (38%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 AL R + ++ N++N +T G++ V F + ++ V + + Sbjct: 14 MDALSLRQNVISQNIANYETPGYKRKYVDFENELQKALSEDSALTLKVNRDQHINNTLSL 73 Query: 72 SFISTGTELD 81 I ++D Sbjct: 74 GKIQPNIQID 83 >gi|84502401|ref|ZP_01000537.1| flagellar basal body rod protein [Oceanicola batsensis HTCC2597] gi|84389213|gb|EAQ02010.1| flagellar basal body rod protein [Oceanicola batsensis HTCC2597] Length = 136 Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 21/43 (48%) Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 +GF++ SN + + EM M ++ + + L + + + I Sbjct: 90 QGFIKVSNVSPIMEMANMREASRSYEANMNLFEAARRMRSQVI 132 Score = 43.3 bits (100), Expect = 0.026, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 25/60 (41%), Gaps = 10/60 (16%) Query: 1 MQ---TSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKN 50 M + I + LA +RL V++N++N + +R + F E++ + Sbjct: 1 MDPLKSILTISASGMLAQGERLKVVSENVANASSTAMSPGEDPYRRKTITFEELLDSESG 60 >gi|312962293|ref|ZP_07776784.1| flagellar basal-body rod protein FlgG [Pseudomonas fluorescens WH6] gi|311283220|gb|EFQ61810.1| flagellar basal-body rod protein FlgG [Pseudomonas fluorescens WH6] Length = 38 Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 6/35 (17%), Positives = 16/35 (45%) Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 + EM MI + + + +I ++ + +N+ Sbjct: 4 VEEMVNMITTQRAYEMNSKVISTADQMLSFVTQNL 38 >gi|170748110|ref|YP_001754370.1| flagellar basal body rod protein FlgB [Methylobacterium radiotolerans JCM 2831] gi|170654632|gb|ACB23687.1| flagellar basal body rod protein [Methylobacterium radiotolerans JCM 2831] Length = 128 Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 20/43 (46%), Gaps = 2/43 (4%) Query: 5 FNIGLAAQLALEQ-RLSTVADNMSNTDTVGFR-TIKVKFSEVV 45 + QL R + ++ N++N +T G+R F +V+ Sbjct: 6 LFNLASRQLQHLTARQAVISGNIANANTPGYRARDLTPFRDVL 48 >gi|220925380|ref|YP_002500682.1| flagellar basal body rod protein FlgC [Methylobacterium nodulans ORS 2060] gi|219949987|gb|ACL60379.1| flagellar basal-body rod protein FlgC [Methylobacterium nodulans ORS 2060] Length = 136 Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 8/53 (15%), Positives = 17/53 (32%) Query: 186 LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 E + G + N N + E M + + + +I + + I Sbjct: 79 HEPGNPAADANGEVRLPNVNLLVETVDMREAQRSYEANLNMITAARRMISRTI 131 Score = 42.5 bits (98), Expect = 0.051, Method: Composition-based stats. Identities = 6/29 (20%), Positives = 14/29 (48%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTD 30 + I + A R+ +++N++N D Sbjct: 4 MKAIGIAASGLRAQSGRMRVISENIANAD 32 >gi|332558510|ref|ZP_08412832.1| FlgC [Rhodobacter sphaeroides WS8N] gi|332276222|gb|EGJ21537.1| FlgC [Rhodobacter sphaeroides WS8N] Length = 138 Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 30/87 (34%), Gaps = 6/87 (6%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDT------VGFRTIKVKFSEVVGAIKNDIDQK 55 + FN+G A A R++TVA N++N T FR ++ F Sbjct: 5 DSVFNVGARALSAQMVRMNTVASNLANAGTVSDRAETAFRPLRPVFETSYADAVGRTGLS 64 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDF 82 + VA + + + D Sbjct: 65 TTDVAGVVSLDREPARVYRPDHPQADP 91 Score = 35.2 bits (79), Expect = 7.9, Method: Composition-based stats. Identities = 4/36 (11%), Positives = 13/36 (36%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + EM +M+ ++++ + + M Sbjct: 100 VSVDEEMVEMMEASRQYQNTLEAVSTLRSLMARTAS 135 >gi|325567533|ref|ZP_08144200.1| flagellar basal-body rod protein FlgC [Enterococcus casseliflavus ATCC 12755] gi|325158966|gb|EGC71112.1| flagellar basal-body rod protein FlgC [Enterococcus casseliflavus ATCC 12755] Length = 138 Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 21/42 (50%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ SN + EM M+ + + + + + N+ + +A+ Sbjct: 92 GYVGQSNVDIADEMVAMLQAVRTYEANVSASEMNKTILKKAL 133 Score = 40.6 bits (93), Expect = 0.21, Method: Composition-based stats. Identities = 9/58 (15%), Positives = 21/58 (36%), Gaps = 6/58 (10%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQ 54 I + +L T++ N++N +T ++ + FSE + + Sbjct: 5 NGLTINASGLALERLKLDTISSNIANVNTNQTQTTAAYQKKSILFSENLKNSREGTPA 62 >gi|224534287|ref|ZP_03674865.1| flagellar hook-associated protein FlgK [Borrelia spielmanii A14S] gi|224514389|gb|EEF84705.1| flagellar hook-associated protein FlgK [Borrelia spielmanii A14S] Length = 627 Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 16/41 (39%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E+ MI Q F + + I + + + I + Sbjct: 586 SGVNKDEELANMIEFQQAFIAASKFITVSAELIDTVINKMG 626 Score = 35.2 bits (79), Expect = 7.2, Method: Composition-based stats. Identities = 12/83 (14%), Positives = 28/83 (33%), Gaps = 3/83 (3%) Query: 1 MQT---SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS 57 M + IG + A + ++TV N+SN G+ +V + +++ Sbjct: 1 MDSTFSGIEIGKRSLFAHKDAMNTVGHNLSNATKPGYSRQRVTMTTTTPLYAPQLNRAKK 60 Query: 58 FVASGKEYLSKEVGSFISTGTEL 80 G+ + + + Sbjct: 61 QGQLGQGIMVQSIDRVKDELLNT 83 >gi|83859394|ref|ZP_00952915.1| flagellar hook-associated protein FlaN, putative [Oceanicaulis alexandrii HTCC2633] gi|83852841|gb|EAP90694.1| flagellar hook-associated protein FlaN, putative [Oceanicaulis alexandrii HTCC2633] Length = 708 Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 8/33 (24%), Positives = 17/33 (51%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGF 34 + L+ A + L T ++N++N +T G+ Sbjct: 4 NSVIGNALSGLRASQLGLRTASNNVANVNTPGY 36 >gi|323698500|ref|ZP_08110412.1| flagellar basal-body rod protein FlgC [Desulfovibrio sp. ND132] gi|323458432|gb|EGB14297.1| flagellar basal-body rod protein FlgC [Desulfovibrio desulfuricans ND132] Length = 145 Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 8/48 (16%), Positives = 21/48 (43%), Gaps = 1/48 (2%) Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 +G++ + N + EM M+ + + + + + +A+ I S Sbjct: 99 QGYVFYPDINVVEEMANMMQAMRGYEANVQTVQAVKNMFQKAL-TIGS 145 Score = 38.3 bits (87), Expect = 0.96, Method: Composition-based stats. Identities = 8/31 (25%), Positives = 16/31 (51%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32 T+ +I + A +L+ ++ NM+N T Sbjct: 4 MTALDISASGLTAQRAQLNVISMNMANMRTT 34 >gi|297618069|ref|YP_003703228.1| flagellar hook-associated protein FlgK [Syntrophothermus lipocalidus DSM 12680] gi|297145906|gb|ADI02663.1| flagellar hook-associated protein FlgK [Syntrophothermus lipocalidus DSM 12680] Length = 618 Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 15/41 (36%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKF 41 M IG A + + L N++N +T G+ Sbjct: 4 MFLGLEIGRRAIMTQQTALDVTGHNVANANTEGYSRQVAVM 44 Score = 43.7 bits (101), Expect = 0.022, Method: Composition-based stats. Identities = 7/42 (16%), Positives = 16/42 (38%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S + EM MI +N+ I ++++ + + Sbjct: 573 TSGVSLDEEMVNMIKFQHAYNAAARYITVIDEAVDVIVNRMG 614 >gi|196247642|ref|ZP_03146344.1| flagellar basal-body rod protein FlgB [Geobacillus sp. G11MC16] gi|196212426|gb|EDY07183.1| flagellar basal-body rod protein FlgB [Geobacillus sp. G11MC16] Length = 129 Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 17/38 (44%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI 48 R +ADN++N DT G++ V+F + Sbjct: 14 GLRYASLRQQAIADNIANVDTPGYKAKDVRFQAELNRA 51 >gi|92114092|ref|YP_574020.1| flagellar hook-associated protein [Chromohalobacter salexigens DSM 3043] gi|91797182|gb|ABE59321.1| Flagellar hook-associated protein [Chromohalobacter salexigens DSM 3043] Length = 539 Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 25/69 (36%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + F+IGL+ A + LST ++N+SN T G+ E + V Sbjct: 1 MSIFSIGLSGLSAAQSALSTTSNNLSNVYTEGYNRQLTILGESYSNGSTGTGVSVDEVQR 60 Query: 62 GKEYLSKEV 70 E Sbjct: 61 QFNSYVTEQ 69 Score = 36.0 bits (81), Expect = 4.7, Method: Composition-based stats. Identities = 7/71 (9%), Positives = 22/71 (30%) Query: 169 FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228 V + + + ++ +S N E ++ Q + + +ID Sbjct: 467 LVNEVGNTTNITQVNLDAQSGLTEQLREYQQSESGVNLDEEYANLVRYQQYYQANARVID 526 Query: 229 ENEKSMLEAIR 239 + + ++ Sbjct: 527 VGSQVLDSVLQ 537 >gi|85710161|ref|ZP_01041226.1| flagellar proximal rod protein [Erythrobacter sp. NAP1] gi|85688871|gb|EAQ28875.1| flagellar proximal rod protein [Erythrobacter sp. NAP1] Length = 117 Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 20/38 (52%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA 47 AA QR+ +A N++N T GF+ + F+ + A Sbjct: 11 AALELRSQRMGVIASNIANAATPGFKARDMDFNAALNA 48 >gi|47566127|ref|ZP_00237165.1| flagellar basal-body rod protein flgC [Bacillus cereus G9241] gi|206974761|ref|ZP_03235676.1| flagellar basal-body rod protein FlgC [Bacillus cereus H3081.97] gi|217959228|ref|YP_002337776.1| flagellar basal body rod protein FlgC [Bacillus cereus AH187] gi|229138444|ref|ZP_04267033.1| Flagellar basal-body rod protein FlgC [Bacillus cereus BDRD-ST26] gi|47557044|gb|EAL15374.1| flagellar basal-body rod protein flgC [Bacillus cereus G9241] gi|206746780|gb|EDZ58172.1| flagellar basal-body rod protein FlgC [Bacillus cereus H3081.97] gi|217065314|gb|ACJ79564.1| flagellar basal-body rod protein FlgC [Bacillus cereus AH187] gi|228644981|gb|EEL01224.1| Flagellar basal-body rod protein FlgC [Bacillus cereus BDRD-ST26] Length = 137 Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 7/40 (17%), Positives = 22/40 (55%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 G++ N + EM ++ + + + T++++ N+K + + Sbjct: 91 GYVRYPNVDVTAEMTNVMVAQKMYEANTSVLNANKKMLDK 130 Score = 42.2 bits (97), Expect = 0.071, Method: Composition-based stats. Identities = 5/33 (15%), Positives = 13/33 (39%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG 33 M + N + + + ++N+ N +T Sbjct: 1 MFQAINASGSGLTTARKWMEVTSNNIVNANTTA 33 >gi|313683371|ref|YP_004061109.1| flagellar basal-body rod protein flgc [Sulfuricurvum kujiense DSM 16994] gi|313156231|gb|ADR34909.1| flagellar basal-body rod protein FlgC [Sulfuricurvum kujiense DSM 16994] Length = 164 Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 8/45 (17%), Positives = 19/45 (42%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 G++ N N + EM ++ T+ + + + + AI + Sbjct: 118 GYVAYPNINPVVEMADLVEATRSYQANVAAFESAKNMAGSAISIL 162 Score = 39.9 bits (91), Expect = 0.31, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 6/49 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44 SF+I A R++T++ N++N T G +R +V F + Sbjct: 4 LNSFDISGYGLSAQRVRVNTISANIANAQTTRTNEGGPYRRQEVIFKAI 52 >gi|294339846|emb|CAZ88209.1| putative Flagellar basal-body rod protein flgB (Putative proximal rod protein) [Thiomonas sp. 3As] Length = 135 Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 12/74 (16%), Positives = 25/74 (33%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69 A QR ++ N++N +T G++ + V FS A + + + Sbjct: 14 TALNLRAQRQQLLSANIANANTPGYKAVDVDFSAAFKAALSGQQTGGLPLKTENARQLAG 73 Query: 70 VGSFISTGTELDFA 83 + + A Sbjct: 74 NVAPAGSNFIAYQA 87 >gi|167614835|ref|ZP_02383470.1| flagellar basal-body rod protein FlgC [Burkholderia thailandensis Bt4] Length = 125 Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 19/42 (45%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G + N N + EM M+ ++ +++ ++ LE + Sbjct: 80 GNVLYPNVNPVEEMTDMLSASRAYSTNVEVLGRVNSMQLELL 121 Score = 36.4 bits (82), Expect = 4.0, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 33/96 (34%), Gaps = 11/96 (11%) Query: 12 QLALEQRLSTVADNMSNT--------DTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 A RL+T+A N++N T +R K F+ + + + Sbjct: 1 MSAQTVRLNTIASNLANADAASGAEDST--YRARKPVFASIFQLDAQGEPRGAAVQVLDV 58 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 ++ + G L A EG+ + +P + Sbjct: 59 VKSTEPLRKVHQPGHPLADA-EGNVLYPNVNPVEEM 93 >gi|242278629|ref|YP_002990758.1| flagellar basal body rod protein FlgB [Desulfovibrio salexigens DSM 2638] gi|242121523|gb|ACS79219.1| flagellar basal-body rod protein FlgB [Desulfovibrio salexigens DSM 2638] Length = 136 Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76 QR + V+ N++N +T G++ +++F E + N +D K + K ++ + Sbjct: 21 QRQNLVSSNLANVNTPGYKEKRLEFEEDLQKAMN-LDAKGKMTRTSKMHIPTAFDANKFE 79 Query: 77 GTE 79 G Sbjct: 80 GDT 82 >gi|157371201|ref|YP_001479190.1| flagellar hook-associated protein FlgK [Serratia proteamaculans 568] gi|157322965|gb|ABV42062.1| flagellar hook-associated protein FlgK [Serratia proteamaculans 568] Length = 548 Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 14/134 (10%), Positives = 39/134 (29%), Gaps = 1/134 (0%) Query: 1 MQTSF-NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFV 59 M S N ++ A + LSTV++N+SN + G+ ++ G + Sbjct: 1 MSNSLINTAMSGLNAAQVALSTVSNNISNYNVAGYNRQTAILAQNGGMSTMNGFIGNGVT 60 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119 + + + G + + + + ++ ++ + Sbjct: 61 VTSVNREYNQFITNQLRGAQSQAGAQNAYFEKISQIDNLLASKTNTLSTNMQDFFSNLEN 120 Query: 120 KYPVLDMASVPIQI 133 + + Sbjct: 121 LVSNAGDDAARQTV 134 >gi|332296509|ref|YP_004438432.1| flagellar hook-associated protein FlgK [Thermodesulfobium narugense DSM 14796] gi|332179612|gb|AEE15301.1| flagellar hook-associated protein FlgK [Thermodesulfobium narugense DSM 14796] Length = 936 Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 16/139 (11%), Positives = 38/139 (27%), Gaps = 8/139 (5%) Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 G + G V G+ ++ I G + G S+ Sbjct: 806 GSSGMPLYGITVGTDGESLTFVTSNPNQSIRVL--GEYSSALGFKNYDGSFTVANAYISM 863 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223 + G ++ + N + +G + EM +I +++ Sbjct: 864 TSNIGTQGQQATTNYTNQSNVVTLLQNQQQSVQG------VSMDEEMTNLIQYQTAYSAS 917 Query: 224 TTLIDENEKSMLEAIRNIA 242 +I+ + + I + Sbjct: 918 ARVINAINSMLDKLINSTG 936 Score = 42.2 bits (97), Expect = 0.062, Method: Composition-based stats. Identities = 7/82 (8%), Positives = 25/82 (30%), Gaps = 3/82 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKF---SEVVGAIKNDIDQKISFVA 60 I +A + + + N++N +T + F + + ++ ++ Sbjct: 9 GLQIAQSALASNQLAMDVTGHNVANANTASYSRQSPVFVQNTPLSYPTSGEVGTGVNIST 68 Query: 61 SGKEYLSKEVGSFISTGTELDF 82 + S + + + Sbjct: 69 IKRYRDSFIDAQLRNASSLQSY 90 >gi|323341389|ref|ZP_08081633.1| flagellar basal-body rod protein FlgB [Lactobacillus ruminis ATCC 25644] gi|323091266|gb|EFZ33894.1| flagellar basal-body rod protein FlgB [Lactobacillus ruminis ATCC 25644] Length = 121 Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 7/44 (15%), Positives = 21/44 (47%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 A + R +++N++N +T ++ +V F + + ++ Sbjct: 9 TAMDVSQTRSELISNNIANVNTPNYKAKRVVFESQLSQAMDSLN 52 >gi|225569981|ref|ZP_03779006.1| hypothetical protein CLOHYLEM_06076 [Clostridium hylemonae DSM 15053] gi|225161451|gb|EEG74070.1| hypothetical protein CLOHYLEM_06076 [Clostridium hylemonae DSM 15053] Length = 136 Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 9/67 (13%), Positives = 20/67 (29%), Gaps = 5/67 (7%) Query: 2 QTSFNIGLAAQLALE-----QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56 S + + ++N++N DT G+++ V F E + Sbjct: 9 INSMYGNTIGMMEKSLDFLWTKQGVTSNNIANVDTPGYKSKYVTFEETFQRRLAAATKAG 68 Query: 57 SFVASGK 63 + Sbjct: 69 DGRQVRQ 75 >gi|37525847|ref|NP_929191.1| flagellar hook-associated protein FlgK [Photorhabdus luminescens subsp. laumondii TTO1] gi|36785276|emb|CAE14217.1| Flagellar hook-associated protein 1 (HAP1) [Photorhabdus luminescens subsp. laumondii TTO1] gi|37681983|gb|AAQ97871.1| FlgK [Photorhabdus luminescens] Length = 549 Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 11/41 (26%), Positives = 21/41 (51%), Gaps = 1/41 (2%) Query: 1 MQTSF-NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 M +S NI ++ A + L TV++N++N+ G+ Sbjct: 1 MSSSLINIAMSGLQAAQIALGTVSNNLANSKVPGYNRQSTV 41 >gi|317121812|ref|YP_004101815.1| flagellar basal-body rod protein FlgB [Thermaerobacter marianensis DSM 12885] gi|315591792|gb|ADU51088.1| flagellar basal-body rod protein FlgB [Thermaerobacter marianensis DSM 12885] Length = 156 Score = 45.6 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 11/37 (29%), Positives = 18/37 (48%) Query: 9 LAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV 45 A L R +A N++N DT G++ V F+ + Sbjct: 10 AAGLEVLALRQRLLAQNVANADTPGYKRYDVDFARAL 46 >gi|309388814|gb|ADO76694.1| flagellar basal-body rod protein FlgB [Halanaerobium praevalens DSM 2228] Length = 128 Score = 45.6 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 8/35 (22%), Positives = 17/35 (48%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV 45 A +R +A+N++N T G++ + F + Sbjct: 10 ALAGSARRGELIANNLANVSTPGYKRQDIDFKSAL 44 >gi|219684621|ref|ZP_03539564.1| flagellar basal-body rod protein FlgB [Borrelia garinii PBr] gi|219671983|gb|EED29037.1| flagellar basal-body rod protein FlgB [Borrelia garinii PBr] Length = 135 Score = 45.6 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 21/44 (47%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK 55 L R S ++DN++N DT F+ K+ F + ++ + Sbjct: 15 LDVLSLRQSVISDNIANVDTPNFKRSKISFESELEKAFSNKGKN 58 >gi|94987301|ref|YP_595234.1| flagellar basal body rod protein [Lawsonia intracellularis PHE/MN1-00] gi|94731550|emb|CAJ54913.1| Flagellar basal body rod protein [Lawsonia intracellularis PHE/MN1-00] Length = 146 Score = 45.6 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 21/42 (50%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G + + N + EM ++ ++ + + +T ID + + A+ Sbjct: 100 GMVSYPDINVVEEMANLMTASRNYEANSTTIDTVKNMYMRAL 141 >gi|218887374|ref|YP_002436695.1| flagellar basal-body rod protein FlgC [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758328|gb|ACL09227.1| flagellar basal-body rod protein FlgC [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 145 Score = 45.6 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 9/44 (20%), Positives = 21/44 (47%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 + GF+ + N + EM ++ + + + T ID + +A+ Sbjct: 98 QDGFVAYPDINVVEEMASLMTAQRGYEANVTTIDTVKAMYTKAL 141 Score = 40.6 bits (93), Expect = 0.19, Method: Composition-based stats. Identities = 8/31 (25%), Positives = 17/31 (54%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32 T+ +IG +A A ++ ++ N++N T Sbjct: 4 MTAIDIGASALNAERTNMNIISMNLANVKTT 34 >gi|42780837|ref|NP_978084.1| flagellar basal body rod protein FlgC [Bacillus cereus ATCC 10987] gi|222095368|ref|YP_002529428.1| flagellar basal body rod protein flgc [Bacillus cereus Q1] gi|229195957|ref|ZP_04322710.1| Flagellar basal-body rod protein FlgC [Bacillus cereus m1293] gi|42736757|gb|AAS40692.1| flagellar basal-body rod protein FlgC [Bacillus cereus ATCC 10987] gi|221239426|gb|ACM12136.1| flagellar basal-body rod protein FlgC [Bacillus cereus Q1] gi|228587516|gb|EEK45581.1| Flagellar basal-body rod protein FlgC [Bacillus cereus m1293] Length = 137 Score = 45.6 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 7/40 (17%), Positives = 22/40 (55%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 G++ N + EM ++ + + + T++++ N+K + + Sbjct: 91 GYVRYPNVDVTAEMTNVMVAQKMYEANTSVLNANKKMLDK 130 Score = 42.2 bits (97), Expect = 0.073, Method: Composition-based stats. Identities = 5/33 (15%), Positives = 13/33 (39%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG 33 M + N + + + ++N+ N +T Sbjct: 1 MFQAINASGSGLTTARKWMEVTSNNIVNANTTA 33 >gi|229029424|ref|ZP_04185507.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH1271] gi|228731883|gb|EEL82782.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH1271] Length = 137 Score = 45.6 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 7/40 (17%), Positives = 22/40 (55%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 G++ N + EM ++ + + + T++++ N+K + + Sbjct: 91 GYVRYPNVDVTAEMTNVMVAQKMYEANTSVLNANKKMLDK 130 Score = 41.8 bits (96), Expect = 0.074, Method: Composition-based stats. Identities = 5/33 (15%), Positives = 13/33 (39%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG 33 M + N + + + ++N+ N +T Sbjct: 1 MFQAINASGSGLTTARKWMEVTSNNIVNANTTA 33 >gi|187778746|ref|ZP_02995219.1| hypothetical protein CLOSPO_02341 [Clostridium sporogenes ATCC 15579] gi|187772371|gb|EDU36173.1| hypothetical protein CLOSPO_02341 [Clostridium sporogenes ATCC 15579] Length = 153 Score = 45.6 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 21/42 (50%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N N + EM M+ + + + T+++ + +A+ Sbjct: 108 GYVSMPNVNVLNEMADMMASVRTYEASVTVMNAEKSMFGKAL 149 Score = 43.7 bits (101), Expect = 0.021, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 20/50 (40%), Gaps = 9/50 (18%) Query: 1 MQTSFNI---GLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKF 41 M +F+ + A R+ T+A N++N T G ++ F Sbjct: 10 MIKAFDTMRISASGLSAERLRMDTIASNIANATTTRTENGGPYKRKIAVF 59 >gi|78355403|ref|YP_386852.1| flagellar basal body rod protein FlgB [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78217808|gb|ABB37157.1| flagellar basal-body rod protein FlgB [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 155 Score = 45.6 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 8/69 (11%), Positives = 26/69 (37%), Gaps = 1/69 (1%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 +R + + NM+N T G++ ++ F + + A + + + + ++++ Sbjct: 35 MDMQLKRQNVIMSNMANVRTPGYKARELDFEKDLQAALS-LGTEGKIARTHEKHVPATFD 93 Query: 72 SFISTGTEL 80 Sbjct: 94 PETFGPEWT 102 >gi|270262395|ref|ZP_06190666.1| flagellar hook-associated protein FlgK [Serratia odorifera 4Rx13] gi|270043079|gb|EFA16172.1| flagellar hook-associated protein FlgK [Serratia odorifera 4Rx13] Length = 548 Score = 45.6 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 14/134 (10%), Positives = 38/134 (28%), Gaps = 1/134 (0%) Query: 1 MQTSF-NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFV 59 M S N ++ A + LSTV++N+SN + G+ ++ G Sbjct: 1 MSNSLINTAMSGLNAAQVALSTVSNNISNYNVAGYNRQTAILAQNGGMSTMSGFIGNGVT 60 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119 + + + G + + + + ++ ++ + Sbjct: 61 VTSVNREYNQFITSQLRGAQSQAGAQNAYFEKISQIDNLLASKTNTLSTNMQDFFSNLQN 120 Query: 120 KYPVLDMASVPIQI 133 + + Sbjct: 121 LVSNAGDDAARQTV 134 >gi|320015457|gb|ADV99028.1| flagellar hook-associated protein 1 [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 554 Score = 45.6 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 1/44 (2%) Query: 1 MQTSF-NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 M S N ++ A + LSTV++N++N G+ F++ Sbjct: 1 MSNSLMNTAMSGLNAAQYALSTVSNNITNFQVAGYNRQNTVFAQ 44 >gi|170748652|ref|YP_001754912.1| flagellar basal body rod protein FlgC [Methylobacterium radiotolerans JCM 2831] gi|170655174|gb|ACB24229.1| flagellar basal-body rod protein FlgC [Methylobacterium radiotolerans JCM 2831] Length = 135 Score = 45.6 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 12/93 (12%), Positives = 30/93 (32%) Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNAN 205 G + K+ + V P+ T E + +G ++ N N Sbjct: 39 GAQPYRRKIPTFTSHLDDETGARLVEAGRVKRDPSAFRTKYEPGNPAADAQGVVQMPNVN 98 Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 ++ E + + + + +I K + + + Sbjct: 99 ALIENMDLREAQRSYEANLNMISATRKMLAQTL 131 Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 8/28 (28%), Positives = 14/28 (50%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTD 30 S + A A R+ +A+N++N D Sbjct: 5 KSLAVAAAGLKAQSGRMRIIAENIANAD 32 >gi|167645332|ref|YP_001682995.1| flagellar basal body rod protein FlgC [Caulobacter sp. K31] gi|167347762|gb|ABZ70497.1| flagellar basal-body rod protein FlgC [Caulobacter sp. K31] Length = 140 Score = 45.6 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 11/102 (10%), Positives = 27/102 (26%), Gaps = 7/102 (6%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQKIS 57 I +A A + R+ +A+N++N ++ +R F + Sbjct: 12 MAIAASALKAQQGRMRVIAENIANANSTARVAGGDPYRRQVPVFKPTTLKGGGEGVVMAK 71 Query: 58 FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 K++ + + + L Sbjct: 72 VDPDMKDFGTAYDPGNPAADAKGYVKLPNVDTLVEALDMKEA 113 Score = 42.2 bits (97), Expect = 0.065, Method: Composition-based stats. Identities = 6/60 (10%), Positives = 23/60 (38%) Query: 183 PTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 T + + +G+++ N +++ E M + + + +I+ + + + Sbjct: 80 GTAYDPGNPAADAKGYVKLPNVDTLVEALDMKEAQRAYEANMNVIETSRAMESRTLDILR 139 >gi|26991080|ref|NP_746505.1| flagellar basal body rod protein FlgB [Pseudomonas putida KT2440] gi|24986115|gb|AAN69969.1|AE016635_5 flagellar basal-body rod protein FlgB [Pseudomonas putida KT2440] Length = 136 Score = 45.6 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 11/51 (21%), Positives = 21/51 (41%) Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLS 67 QR +A+N++N DT ++ + F+ V+ A + F Sbjct: 21 QRAEVLANNIANADTPNYKARDMDFASVLAAESDKQQSGGRFNLDRTNSRH 71 >gi|311992323|gb|ADQ26735.1| proximal rod protein [Aeromonas hydrophila] Length = 131 Score = 45.6 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 13/98 (13%), Positives = 32/98 (32%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 +R ++ N++N DT GF+ + FS+ + + ++ + L + Sbjct: 15 LSVRSKRAEVLSSNIANADTPGFKARDINFSQALEEAQQQQGFGLATTSEKHFALQMDAP 74 Query: 72 SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109 L ++ R L ++ + Sbjct: 75 GVTQYRNPLQPDTGDGNTVDVQQERSEFLRNSLEYQTS 112 >gi|251789174|ref|YP_003003895.1| flagellar hook-associated protein FlgK [Dickeya zeae Ech1591] gi|247537795|gb|ACT06416.1| flagellar hook-associated protein FlgK [Dickeya zeae Ech1591] Length = 640 Score = 45.6 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 12/39 (30%), Positives = 19/39 (48%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39 M N G++ A + LSTV++N+SN G+ Sbjct: 1 MSNLINTGMSGLSAAQAALSTVSNNISNQAVAGYSRQNA 39 >gi|238758113|ref|ZP_04619293.1| Flagellar basal-body rod protein flgB [Yersinia aldovae ATCC 35236] gi|238703651|gb|EEP96188.1| Flagellar basal-body rod protein flgB [Yersinia aldovae ATCC 35236] Length = 137 Score = 45.6 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 24/65 (36%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR ++ N++N DT GF+ + FS + + + V+ Sbjct: 15 ALNLRSQRQEVLSSNIANADTPGFQARDIDFSSQLKKVMEQGRVNGTGVSLSLTSARHIP 74 Query: 71 GSFIS 75 S + Sbjct: 75 ASTVQ 79 >gi|22126384|ref|NP_669807.1| flagellar hook-associated protein FlgK [Yersinia pestis KIM 10] gi|45441403|ref|NP_992942.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar Microtus str. 91001] gi|51596017|ref|YP_070208.1| flagellar hook-associated protein FlgK [Yersinia pseudotuberculosis IP 32953] gi|108807179|ref|YP_651095.1| flagellar hook-associated protein FlgK [Yersinia pestis Antiqua] gi|108812477|ref|YP_648244.1| flagellar hook-associated protein FlgK [Yersinia pestis Nepal516] gi|145598604|ref|YP_001162680.1| flagellar hook-associated protein FlgK [Yersinia pestis Pestoides F] gi|149366245|ref|ZP_01888280.1| flagellar hook-associated protein 1 [Yersinia pestis CA88-4125] gi|153948415|ref|YP_001401283.1| flagellar hook-associated protein FlgK [Yersinia pseudotuberculosis IP 31758] gi|162421752|ref|YP_001606478.1| flagellar hook-associated protein FlgK [Yersinia pestis Angola] gi|165925892|ref|ZP_02221724.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar Orientalis str. F1991016] gi|165938764|ref|ZP_02227319.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar Orientalis str. IP275] gi|166010871|ref|ZP_02231769.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar Antiqua str. E1979001] gi|166210949|ref|ZP_02236984.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar Antiqua str. B42003004] gi|167401050|ref|ZP_02306553.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167420208|ref|ZP_02311961.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425863|ref|ZP_02317616.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167467496|ref|ZP_02332200.1| flagellar hook-associated protein FlgK [Yersinia pestis FV-1] gi|186895120|ref|YP_001872232.1| flagellar hook-associated protein FlgK [Yersinia pseudotuberculosis PB1/+] gi|218928928|ref|YP_002346803.1| flagellar hook-associated protein FlgK [Yersinia pestis CO92] gi|229896251|ref|ZP_04511421.1| flagellar hook-associated protein 1 [Yersinia pestis Pestoides A] gi|229897188|ref|ZP_04512344.1| flagellar hook-associated protein 1 [Yersinia pestis biovar Orientalis str. PEXU2] gi|229897915|ref|ZP_04513066.1| flagellar hook-associated protein 1 [Yersinia pestis biovar Orientalis str. India 195] gi|229902854|ref|ZP_04517971.1| flagellar hook-associated protein 1 [Yersinia pestis Nepal516] gi|270486639|ref|ZP_06203713.1| flagellar hook-associated protein FlgK [Yersinia pestis KIM D27] gi|294504024|ref|YP_003568086.1| flagellar hook-associated protein [Yersinia pestis Z176003] gi|21959370|gb|AAM86058.1|AE013853_6 flagellar biosynthesis protein, hook-filament junction protein 1 [Yersinia pestis KIM 10] gi|45436263|gb|AAS61819.1| flagellar hook-associated protein 1 [Yersinia pestis biovar Microtus str. 91001] gi|51589299|emb|CAH20920.1| flagellar hook-associated protein 1 [Yersinia pseudotuberculosis IP 32953] gi|108776125|gb|ABG18644.1| flagellar hook-associated protein 1 [Yersinia pestis Nepal516] gi|108779092|gb|ABG13150.1| flagellar hook-associated protein 1 [Yersinia pestis Antiqua] gi|115347539|emb|CAL20448.1| flagellar hook-associated protein 1 [Yersinia pestis CO92] gi|145210300|gb|ABP39707.1| flagellar hook-associated protein 1 [Yersinia pestis Pestoides F] gi|149292658|gb|EDM42732.1| flagellar hook-associated protein 1 [Yersinia pestis CA88-4125] gi|152959910|gb|ABS47371.1| flagellar hook-associated protein FlgK [Yersinia pseudotuberculosis IP 31758] gi|162354567|gb|ABX88515.1| flagellar hook-associated protein FlgK [Yersinia pestis Angola] gi|165913378|gb|EDR32000.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar Orientalis str. IP275] gi|165922096|gb|EDR39273.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar Orientalis str. F1991016] gi|165990215|gb|EDR42516.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar Antiqua str. E1979001] gi|166208129|gb|EDR52609.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar Antiqua str. B42003004] gi|166961903|gb|EDR57924.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167049439|gb|EDR60847.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167055262|gb|EDR65059.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar Mediaevalis str. K1973002] gi|186698146|gb|ACC88775.1| flagellar hook-associated protein FlgK [Yersinia pseudotuberculosis PB1/+] gi|229680301|gb|EEO76400.1| flagellar hook-associated protein 1 [Yersinia pestis Nepal516] gi|229688956|gb|EEO81021.1| flagellar hook-associated protein 1 [Yersinia pestis biovar Orientalis str. India 195] gi|229693525|gb|EEO83574.1| flagellar hook-associated protein 1 [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701174|gb|EEO89203.1| flagellar hook-associated protein 1 [Yersinia pestis Pestoides A] gi|262361790|gb|ACY58511.1| flagellar hook-associated protein [Yersinia pestis D106004] gi|262366074|gb|ACY62631.1| flagellar hook-associated protein [Yersinia pestis D182038] gi|270335143|gb|EFA45920.1| flagellar hook-associated protein FlgK [Yersinia pestis KIM D27] gi|294354483|gb|ADE64824.1| flagellar hook-associated protein [Yersinia pestis Z176003] Length = 554 Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 1/44 (2%) Query: 1 MQTSF-NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 M S N ++ A + LSTV++N++N G+ F++ Sbjct: 1 MSNSLMNTAMSGLNAAQYALSTVSNNITNFQVAGYNRQNTVFAQ 44 >gi|119715009|ref|YP_921974.1| flagellar basal-body rod protein FlgB [Nocardioides sp. JS614] gi|119535670|gb|ABL80287.1| flagellar basal-body rod protein FlgB [Nocardioides sp. JS614] Length = 118 Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 28/84 (33%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69 AA + R ADN++N DT G+R V F + A D + + Sbjct: 15 AALDGIALRQRVTADNIANVDTPGYRASSVDFETSLRAAIAAGDPAGAAPGELLATDTPV 74 Query: 70 VGSFISTGTELDFALEGDAWFALE 93 + + + + F + Sbjct: 75 GANGNNVDLRKETLAAVQSQFQYQ 98 >gi|170024641|ref|YP_001721146.1| flagellar hook-associated protein FlgK [Yersinia pseudotuberculosis YPIII] gi|169751175|gb|ACA68693.1| flagellar hook-associated protein FlgK [Yersinia pseudotuberculosis YPIII] Length = 554 Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 1/44 (2%) Query: 1 MQTSF-NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 M S N ++ A + LSTV++N++N G+ F++ Sbjct: 1 MSNSLMNTAMSGLNAAQYALSTVSNNITNFQVAGYNRQNTVFAQ 44 >gi|167576660|ref|ZP_02369534.1| flagellar basal-body rod protein FlgC [Burkholderia thailandensis TXDOH] Length = 138 Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 19/42 (45%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G + N N + EM M+ ++ +++ ++ LE + Sbjct: 93 GNVLYPNVNPVEEMTDMLSASRAYSTNVEVLGRVNSMQLELL 134 Score = 39.1 bits (89), Expect = 0.55, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 28/82 (34%), Gaps = 10/82 (12%) Query: 7 IGLAAQLALEQRLSTVADNMSNT--------DTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 I +A A RL+T+A N++N T +R K F+ + + + Sbjct: 9 IAGSAMSAQTVRLNTIASNLANADAASGAEDST--YRARKPVFASIFQLDAQGEPRGAAV 66 Query: 59 VASGKEYLSKEVGSFISTGTEL 80 ++ + G L Sbjct: 67 QVLDVVKSTEPLRKVHQPGHPL 88 >gi|27380924|ref|NP_772453.1| flagellar basal body rod protein FlgC [Bradyrhizobium japonicum USDA 110] gi|27354090|dbj|BAC51078.1| flagellar basal-body rod protein [Bradyrhizobium japonicum USDA 110] Length = 141 Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 9/47 (19%), Positives = 20/47 (42%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G ++ N NS+ EM M + + + +I + + + + S Sbjct: 95 GNVKYPNVNSVVEMTDMRDAQRSYEANLNIISATRRMIQRTLDILKS 141 Score = 42.2 bits (97), Expect = 0.060, Method: Composition-based stats. Identities = 12/55 (21%), Positives = 22/55 (40%), Gaps = 7/55 (12%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTD----TVG---FRTIKVKFSEVVGAIKN 50 S I + A R+ +++N++N D T G +R FS + + Sbjct: 10 RSMAIATSGLRAQAGRMRVISENIANADSTSQTAGGDPYRRKVPTFSSALDRTLD 64 >gi|152965613|ref|YP_001361397.1| flagellar basal-body rod protein FlgB [Kineococcus radiotolerans SRS30216] gi|151360130|gb|ABS03133.1| flagellar basal-body rod protein FlgB [Kineococcus radiotolerans SRS30216] Length = 116 Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 30/78 (38%), Gaps = 3/78 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + + L A ++ +ADN+SN +T G+ KV F + + D + V+ Sbjct: 8 ALHTALNGLQARQRA---IADNISNINTPGYLANKVAFENELKSAVATGDAGAAAVSGIA 64 Query: 64 EYLSKEVGSFISTGTELD 81 S E LD Sbjct: 65 TQKSLEPTREDGNNVNLD 82 >gi|325288805|ref|YP_004264986.1| flagellar basal-body rod protein FlgB [Syntrophobotulus glycolicus DSM 8271] gi|324964206|gb|ADY54985.1| flagellar basal-body rod protein FlgB [Syntrophobotulus glycolicus DSM 8271] Length = 132 Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 22/62 (35%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 NI L R +ADN++N DT F+ V F V+ + ++ Sbjct: 8 RVLNILEGGLDGLSLRNKVLADNIANVDTPNFKKSDVNFEAVLQEAIGEDQALPMKMSLP 67 Query: 63 KE 64 Sbjct: 68 GH 69 >gi|297569162|ref|YP_003690506.1| flagellar basal-body rod protein FlgC [Desulfurivibrio alkaliphilus AHT2] gi|296925077|gb|ADH85887.1| flagellar basal-body rod protein FlgC [Desulfurivibrio alkaliphilus AHT2] Length = 144 Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 6/41 (14%), Positives = 17/41 (41%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 G + N N +M M++ + + + ++ ++ A Sbjct: 99 GIVRYPNVNVAEQMVDMMNARRSYEANVAALEAVKEMAARA 139 Score = 39.5 bits (90), Expect = 0.45, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 30/91 (32%), Gaps = 8/91 (8%) Query: 1 MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDI 52 M T+ I +A A RL+ + N++N +T G +R V F Sbjct: 1 MDILTAMKISGSALKAERSRLNVASMNLANANTTRTMEGGPYRAKSVVFEAKPLDRDFGA 60 Query: 53 DQKISFVASGKEYLSKEVGSFISTGTELDFA 83 + + K + + V D A Sbjct: 61 ALQGAASRLRKVEVVEVVEDQAPFREVYDPA 91 >gi|327480017|gb|AEA83327.1| flagellar basal body rod protein FlgB [Pseudomonas stutzeri DSM 4166] Length = 134 Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 10/50 (20%), Positives = 21/50 (42%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65 QR +A+N++N DT ++ + FS V+ + + + Sbjct: 20 SQRAEVLANNIANADTPNYKARDLDFSSVLAEQSARSQGGFGVARTSERH 69 >gi|292492361|ref|YP_003527800.1| flagellar basal-body rod protein FlgC [Nitrosococcus halophilus Nc4] gi|291580956|gb|ADE15413.1| flagellar basal-body rod protein FlgC [Nitrosococcus halophilus Nc4] Length = 137 Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 23/43 (53%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N + EM MI ++ + + + + +++ +L ++ Sbjct: 92 GYIFHPNVNPIEEMANMISASRSYQNSVEVANTSKQLLLRTLQ 134 Score = 36.8 bits (83), Expect = 2.4, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 29/87 (33%), Gaps = 6/87 (6%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56 +I A A RL+T A N++N D+V +R F+ V+ + Sbjct: 5 NIIDISGTAMSAQTLRLNTTASNLANADSVSSSVNQTYRARHPVFATVLNDFNQEEATGG 64 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFA 83 V E + + + A Sbjct: 65 VQVLGVVESKAPLQQEYAPDHPMANEA 91 >gi|257095353|ref|YP_003168994.1| flagellar hook-associated protein FlgK [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047877|gb|ACV37065.1| flagellar hook-associated protein FlgK [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 681 Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 10/49 (20%), Positives = 15/49 (30%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 L A + L T N++N T GF + + G Sbjct: 5 MIGSSLTGINAAQLGLQTTEHNIANASTPGFSRQRTVQASNPGVQSGAG 53 Score = 39.9 bits (91), Expect = 0.32, Method: Composition-based stats. Identities = 23/162 (14%), Positives = 40/162 (24%), Gaps = 2/162 (1%) Query: 82 FALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFN 141 A A S I L G + SG D + + N Sbjct: 522 PAAVPVAGLDYRSGDSITLVDPAVVSTPPAGFSFTISGLPNNGDTFVISRNTGGTADSRN 581 Query: 142 VGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLED 201 G++ + + Y D V + S + + Sbjct: 582 ALALGQLQVQNTMSGKTATYQ-DAYAQLVSQTGSKTRQIQVSGEAQQALLEQAQASRDSL 640 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 S N E +I Q + + + ++ E I + S Sbjct: 641 SAVNLDEEAANLIRYQQAYQASAKALQIG-ANLFETILQLGS 681 >gi|218778840|ref|YP_002430158.1| flagellar hook-associated protein FlgK [Desulfatibacillum alkenivorans AK-01] gi|218760224|gb|ACL02690.1| Flagellar hook-associated protein FlgK [Desulfatibacillum alkenivorans AK-01] Length = 583 Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 9/50 (18%), Positives = 20/50 (40%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 ++ +I + A + + V+ N++N +T G+ V V Sbjct: 6 SALDIAVGAMATHQYGMDVVSHNVANVNTEGYTLQTVINKSKVPQASGGF 55 Score = 43.3 bits (100), Expect = 0.032, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 28/78 (35%), Gaps = 6/78 (7%) Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLED-----SNANSMYEMGQMIHLTQKFN 221 +GF S + ++ ++ + LE S + EM ++I L Q + Sbjct: 504 EGFYASMISALGSSLNSAERNREFAESMVQN-LETVRGSISGVSLDEEMTKLIELQQSYA 562 Query: 222 SITTLIDENEKSMLEAIR 239 + LI ++ + Sbjct: 563 AAAKLITTMDEIFQTLMT 580 >gi|146278635|ref|YP_001168794.1| flagellar basal body rod protein FlgC [Rhodobacter sphaeroides ATCC 17025] gi|145556876|gb|ABP71489.1| protein of unknown function DUF1078 domain protein [Rhodobacter sphaeroides ATCC 17025] Length = 126 Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 23/69 (33%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 + RL V++N++N DT GF V F + +S ++ Sbjct: 14 GMRSQALRLRHVSENIANVDTPGFHRKTVSFQSEPDSGLVSTGPVRLDRSSLQKMYDPGH 73 Query: 71 GSFISTGTE 79 TG Sbjct: 74 PMADDTGYY 82 Score = 45.2 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 8/74 (10%), Positives = 23/74 (31%) Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223 + G V + + + + G+ + SN N + E+ + + + Sbjct: 47 EPDSGLVSTGPVRLDRSSLQKMYDPGHPMADDTGYYDGSNVNLVVEIADAREAQRSYEAN 106 Query: 224 TTLIDENEKSMLEA 237 + D+ + Sbjct: 107 LRMFDQARQMTQSL 120 >gi|2494517|sp|P70910|FLGB_BORHE RecName: Full=Flagellar basal-body rod protein flgB gi|1621620|gb|AAB51473.1| flagellar rod protein FlgB [Borrelia hermsii] Length = 135 Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 13/32 (40%), Positives = 17/32 (53%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 L R S +ADN++N DT F+ KV F Sbjct: 15 LDVLSLRQSVIADNIANVDTPNFKRSKVTFEA 46 >gi|271500072|ref|YP_003333097.1| flagellar hook-associated protein FlgK [Dickeya dadantii Ech586] gi|270343627|gb|ACZ76392.1| flagellar hook-associated protein FlgK [Dickeya dadantii Ech586] Length = 638 Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 12/39 (30%), Positives = 19/39 (48%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39 M N G++ A + LSTV++N+SN G+ Sbjct: 1 MSNLINTGMSGLSAAQAALSTVSNNISNQAVAGYSRQNA 39 >gi|92116946|ref|YP_576675.1| flagellar basal body rod protein FlgC [Nitrobacter hamburgensis X14] gi|91799840|gb|ABE62215.1| flagellar basal-body rod protein FlgC [Nitrobacter hamburgensis X14] Length = 141 Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 9/49 (18%), Positives = 20/49 (40%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G ++ N NS+ EM M + + + +I + + + + S Sbjct: 93 ASGNVKYPNVNSLVEMTDMRDAQRSYEANLNIISATRRMIQRTLDILKS 141 Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 11/116 (9%), Positives = 34/116 (29%), Gaps = 11/116 (9%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKN---- 50 S +I + A R+ +++N++N D+ +R FS + + Sbjct: 9 MRSMSIATSGLRAQAGRMRVISENIANADSTAQVPGGDPYRRKVPTFSSALDRALDAKVV 68 Query: 51 DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106 + + +++ + + ++G + + Sbjct: 69 SLGRVKPDMSTFRIKHEPSNPAADASGNVKYPNVNSLVEMTDMRDAQRSYEANLNI 124 >gi|182418356|ref|ZP_02949651.1| flagellar basal-body rod protein FlgC [Clostridium butyricum 5521] gi|237666561|ref|ZP_04526546.1| flagellar basal-body rod protein FlgC [Clostridium butyricum E4 str. BoNT E BL5262] gi|182377738|gb|EDT75282.1| flagellar basal-body rod protein FlgC [Clostridium butyricum 5521] gi|237657760|gb|EEP55315.1| flagellar basal-body rod protein FlgC [Clostridium butyricum E4 str. BoNT E BL5262] Length = 135 Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 19/42 (45%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N N + EM M+ T+ + + + + +A+ Sbjct: 90 GYVTMPNVNVLNEMADMMVATRSYEANVDTFNALKSMFSKAL 131 Score = 40.2 bits (92), Expect = 0.28, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 33/114 (28%), Gaps = 7/114 (6%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G---FRTIKVKFSEVVGAIKNDIDQK 55 S I A R+ T+ NMSN T G + F E + A K K Sbjct: 5 KSMQISATGLSAERLRMDTITSNMSNARTTRSADGSGPYVRRIAVFQEALDANKEMAGVK 64 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109 + L KE E + + E ++ TR V Sbjct: 65 AVKIEKDNSPLRKEYNPNHPDADENGYVTMPNVNVLNEMADMMVATRSYEANVD 118 >gi|222112615|ref|YP_002554879.1| flagellar basal body rod protein [Acidovorax ebreus TPSY] gi|221732059|gb|ACM34879.1| flagellar basal body rod protein [Acidovorax ebreus TPSY] Length = 107 Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 20/58 (34%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 M +I + A + RL T A N++N +T GF V S Sbjct: 8 MTALASIARSGLQAAQLRLGTSAHNVANLNTPGFTRQVVDQQAAPAQGGVQARTGRSG 65 >gi|87306349|ref|ZP_01088496.1| probable flagellar hook-associated protein [Blastopirellula marina DSM 3645] gi|87290528|gb|EAQ82415.1| probable flagellar hook-associated protein [Blastopirellula marina DSM 3645] Length = 567 Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 9/80 (11%), Positives = 25/80 (31%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 S A +A + + +N++N +T + +V ++ ++ + Sbjct: 6 SLQQSKNALVAAQIGIQVTGNNIANVNTPDYLRERVIYTPAPTQSYGNLRLGMGVQVEAV 65 Query: 64 EYLSKEVGSFISTGTELDFA 83 + + D A Sbjct: 66 VQQVDQFLEERLRNSISDLA 85 Score = 43.7 bits (101), Expect = 0.020, Method: Composition-based stats. Identities = 6/38 (15%), Positives = 16/38 (42%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S + E +I ++F + + LI ++ + + Sbjct: 529 SGVSLDEEAVNLITFQRQFQAASRLISVIDELLEVLVN 566 >gi|256830789|ref|YP_003159517.1| flagellar basal-body rod protein FlgB [Desulfomicrobium baculatum DSM 4028] gi|256579965|gb|ACU91101.1| flagellar basal-body rod protein FlgB [Desulfomicrobium baculatum DSM 4028] Length = 136 Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 9/39 (23%), Positives = 20/39 (51%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50 QR + V+ N++N +T G++ ++F + + A Sbjct: 16 MDFQLQRQNIVSANLANINTPGYKARTLEFEKDLQAALG 54 >gi|150019082|ref|YP_001311336.1| flagellar basal body rod protein FlgC [Clostridium beijerinckii NCIMB 8052] gi|149905547|gb|ABR36380.1| flagellar basal-body rod protein FlgC [Clostridium beijerinckii NCIMB 8052] Length = 135 Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 19/42 (45%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N N + EM M+ T+ + + + + +A+ Sbjct: 90 GYVTMPNVNVLNEMADMMVATRSYEANVDTFNALKSMFSKAL 131 Score = 42.9 bits (99), Expect = 0.036, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 33/113 (29%), Gaps = 7/113 (6%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTV----G---FRTIKVKFSEVVGAIKNDIDQKI 56 S I A R+ T+ NM+N T G + F E + A K+ K Sbjct: 6 SMQISATGLSAERLRMDTITSNMANASTTRSANGKGPYVRKVAVFQEALDANKDMAGVKA 65 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109 + + L K + + E ++ TR V Sbjct: 66 VKIENDPSPLRKVYDPTHPDADSNGYVTMPNVNVLNEMADMMVATRSYEANVD 118 >gi|289627760|ref|ZP_06460714.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289651650|ref|ZP_06482993.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv. aesculi str. 2250] gi|330866419|gb|EGH01128.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 137 Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 26/79 (32%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + I A QR +A+N+SN DT F+ + FS V+ A + + + Sbjct: 6 DKALGIHEKALNFRAQRAEVLANNISNADTPNFKARDLDFSSVLAAENDKVQNGHFALNK 65 Query: 62 GKEYLSKEVGSFISTGTEL 80 + Sbjct: 66 TNSRHIHIEAEGMGNDDGT 84 >gi|257866376|ref|ZP_05646029.1| flagellar basal body rod protein FlgC [Enterococcus casseliflavus EC30] gi|257871287|ref|ZP_05650940.1| flagellar basal body rod protein FlgC [Enterococcus gallinarum EG2] gi|257873108|ref|ZP_05652761.1| flagellar basal body rod protein FlgC [Enterococcus casseliflavus EC10] gi|257875989|ref|ZP_05655642.1| flagellar basal body rod protein FlgC [Enterococcus casseliflavus EC20] gi|257800334|gb|EEV29362.1| flagellar basal body rod protein FlgC [Enterococcus casseliflavus EC30] gi|257805451|gb|EEV34273.1| flagellar basal body rod protein FlgC [Enterococcus gallinarum EG2] gi|257807272|gb|EEV36094.1| flagellar basal body rod protein FlgC [Enterococcus casseliflavus EC10] gi|257810155|gb|EEV38975.1| flagellar basal body rod protein FlgC [Enterococcus casseliflavus EC20] Length = 138 Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 21/42 (50%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ SN + EM M+ + + + + + N+ + +A+ Sbjct: 92 GYVGQSNVDIADEMVAMLQAVRTYEANVSASEMNKTILKKAL 133 Score = 44.5 bits (103), Expect = 0.012, Method: Composition-based stats. Identities = 15/123 (12%), Positives = 39/123 (31%), Gaps = 7/123 (5%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDID- 53 M I + +L T++ N++N +T ++ + FSE + + Sbjct: 3 MFNGLTINASGLALERLKLDTISSNIANVNTNQTQTTAAYQKKSILFSENLKNSREGTPA 62 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113 V ++++ + D G + + +L ++ S Sbjct: 63 TYGVKVTGIAADETEKLTYDPTNPAANDEGYVGQSNVDIADEMVAMLQAVRTYEANVSAS 122 Query: 114 LVS 116 ++ Sbjct: 123 EMN 125 >gi|51246541|ref|YP_066425.1| flagellar hook-associated protein 1 (FlgK) [Desulfotalea psychrophila LSv54] gi|50877578|emb|CAG37418.1| related to Flagellar hook-associated protein 1 (FlgK) [Desulfotalea psychrophila LSv54] Length = 480 Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 24/232 (10%), Positives = 62/232 (26%), Gaps = 16/232 (6%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 + N G + ++++ +N++N +T G+ K S + Sbjct: 6 NALNAGRTSLEVSQKQIEISGNNIANVNTKGYSKQSAKLSPYPAMNFGGFFVGQGVKVTD 65 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII------LTRDGRFKVTDDGSLVS 116 + S +D+ E + I L D L + Sbjct: 66 VDRQHNTFISNQLVNKSVDYGYENSKTASFAEIERIFSVSKDNLAGDIDHFFDSWQELST 125 Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + D+ + + E ++ + G+ V+ + N Sbjct: 126 KPTDVVLRDITLQKGSVLAAKFNNSANELDQVQKNIGAQLKSGVSEVNNKLKQLGELNDR 185 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228 I + + + + + E+ Q I + + +++ Sbjct: 186 IYQIENNGQTANGARDSRES---------LLQELAQTIGAQ-SYELSSGMVN 227 Score = 42.9 bits (99), Expect = 0.040, Method: Composition-based stats. Identities = 6/36 (16%), Positives = 12/36 (33%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + EM +I F S + ++ M + Sbjct: 443 VSLEEEMISLIQFQNSFQSSAKFLSTVDELMDTLLN 478 >gi|293395589|ref|ZP_06639872.1| flagellar hook-associated protein FlgK [Serratia odorifera DSM 4582] gi|291421908|gb|EFE95154.1| flagellar hook-associated protein FlgK [Serratia odorifera DSM 4582] Length = 549 Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 32/75 (42%), Gaps = 3/75 (4%) Query: 1 MQTSF-NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE--VVGAIKNDIDQKIS 57 M S N ++ A + LSTV++N+SN + G+ ++ +G + I ++ Sbjct: 1 MSNSLINTAMSGLNAAQVALSTVSNNISNYNVAGYNRQTAILAQNGGMGTMSGFIGNGVT 60 Query: 58 FVASGKEYLSKEVGS 72 + +EY Sbjct: 61 VTSVNREYNQFITNQ 75 >gi|255030210|ref|ZP_05302161.1| flagellar basal body rod protein FlgB [Listeria monocytogenes LO28] Length = 107 Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 10/45 (22%), Positives = 20/45 (44%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56 L+ V++N++N +T F+ + F E +G+ Q Sbjct: 12 LNYLQTANQVVSNNIANANTPNFKASEASFEESLGSSLRASGQNS 56 >gi|253990121|ref|YP_003041477.1| flagellar hook-associated protein FlgK [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253781571|emb|CAQ84734.1| flagellar hook-associated protein 1 flgK [Photorhabdus asymbiotica] Length = 547 Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 15/84 (17%), Positives = 28/84 (33%), Gaps = 6/84 (7%) Query: 1 MQTSF-NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFV 59 M S N ++ A + L T+++N++N G+ V + F+ Sbjct: 1 MSNSLINTAMSGLQAAQIALGTLSNNVANMRVPGYNR-----QSTVINQNGGTMTSVGFI 55 Query: 60 ASGKEYLSKEVGSFISTGTELDFA 83 +G S +L A Sbjct: 56 GNGVTVASINRQYNEFINQQLSSA 79 >gi|229544390|ref|ZP_04433448.1| flagellar basal-body rod protein FlgB [Bacillus coagulans 36D1] gi|229324875|gb|EEN90552.1| flagellar basal-body rod protein FlgB [Bacillus coagulans 36D1] Length = 129 Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 11/71 (15%), Positives = 23/71 (32%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A R +++N++N DT ++ V F V+ N I + + Sbjct: 14 ALQYASLRQKVISNNIANADTPNYKAQDVSFKNVLEDSVNAISATRTDPRHFRFSAGDSS 73 Query: 71 GSFISTGTELD 81 ++ Sbjct: 74 SEIVTESGTTY 84 >gi|86750885|ref|YP_487381.1| flagellar basal body rod protein FlgC [Rhodopseudomonas palustris HaA2] gi|86573913|gb|ABD08470.1| flagellar basal-body rod protein FlgC [Rhodopseudomonas palustris HaA2] Length = 141 Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 9/49 (18%), Positives = 20/49 (40%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G ++ N NSM EM M + + + +I + + + + + Sbjct: 93 AAGNVKYPNVNSMIEMTDMRSAQRSYEANLNVISATRRMIQRTLDILKA 141 Score = 42.9 bits (99), Expect = 0.034, Method: Composition-based stats. Identities = 9/55 (16%), Positives = 21/55 (38%), Gaps = 7/55 (12%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKN 50 S I + A R+ +++N++N D+ +R F+ + + Sbjct: 10 RSMGIATSGLRAQAGRMRVISENIANADSTAQKPGGDPYRRKVPTFTSALDRSLD 64 >gi|304407695|ref|ZP_07389346.1| flagellar hook-associated protein FlgK [Paenibacillus curdlanolyticus YK9] gi|304343178|gb|EFM09021.1| flagellar hook-associated protein FlgK [Paenibacillus curdlanolyticus YK9] Length = 508 Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 9/75 (12%), Positives = 26/75 (34%), Gaps = 6/75 (8%) Query: 168 GFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 G +E + + N + S G + EM ++I +++ + Sbjct: 436 GLQSQEANRQATNQQDIVTQVDSRRQSVSG------VSLDEEMSELIKYQHAYSAAARFM 489 Query: 228 DENEKSMLEAIRNIA 242 ++++ + I + Sbjct: 490 TTIDETLDKVINGMG 504 Score = 42.9 bits (99), Expect = 0.035, Method: Composition-based stats. Identities = 9/37 (24%), Positives = 16/37 (43%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 S + + +ST N++N +T GF +V Sbjct: 7 SIETAKRSLFTEQANISTTGHNIANANTPGFSRQRVN 43 >gi|296390550|ref|ZP_06880025.1| flagellar hook-associated protein FlgK [Pseudomonas aeruginosa PAb1] Length = 683 Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 9/52 (17%), Positives = 17/52 (32%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M +IGL+ + L+ N++N T G+ + Sbjct: 1 MSDLLSIGLSGLGTSQTWLTITGHNITNVKTPGYSRQDAIQQTRIPQFSGAG 52 >gi|254496885|ref|ZP_05109733.1| flagellar basal body rod protein FlgC [Legionella drancourtii LLAP12] gi|254353904|gb|EET12591.1| flagellar basal body rod protein FlgC [Legionella drancourtii LLAP12] Length = 140 Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 13/93 (13%), Positives = 35/93 (37%) Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANS 206 + V + D V+ + + +S P + + +GF+ N N Sbjct: 45 KYPIFKTVQENATQWMGDQINAGVQLKGTYVSTADPIKHYQPNNPQADAKGFIYTPNVNY 104 Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + EM +I ++ + L++ ++ + ++ Sbjct: 105 VDEMANVISASRSYQMNIELVNNAKQLIQRTLQ 137 >gi|83716764|ref|YP_438387.1| flagellar basal-body rod protein FlgC [Burkholderia thailandensis E264] gi|257141420|ref|ZP_05589682.1| flagellar basal-body rod protein FlgC [Burkholderia thailandensis E264] gi|83650589|gb|ABC34653.1| flagellar basal-body rod protein FlgC [Burkholderia thailandensis E264] Length = 138 Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 19/42 (45%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G + N N + EM M+ ++ +++ ++ LE + Sbjct: 93 GNVLYPNVNPVEEMTDMLSASRAYSTNVEVLGRVNSMQLELL 134 Score = 40.6 bits (93), Expect = 0.20, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 36/101 (35%), Gaps = 11/101 (10%) Query: 7 IGLAAQLALEQRLSTVADNMSNT--------DTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 I +A A RL+T+A N++N T +R K F+ + + + Sbjct: 9 IAGSAMSAQTVRLNTIASNLANADAASGAEDST--YRARKPVFASIFQLDAQGEPRGAAV 66 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 ++ + G L A EG+ + +P + Sbjct: 67 QVLDVVKSTEPLRKVHQPGHPLADA-EGNVLYPNVNPVEEM 106 >gi|325921021|ref|ZP_08182903.1| flagellar basal-body rod protein FlgB [Xanthomonas gardneri ATCC 19865] gi|325548503|gb|EGD19475.1| flagellar basal-body rod protein FlgB [Xanthomonas gardneri ATCC 19865] Length = 182 Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 24/50 (48%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65 EQR+ +A N+SN DT G++ + F + + + D + K Y Sbjct: 69 EQRMKLIASNLSNVDTPGYKAKDMDFEAALKSAEGVRDGSLMQTTDAKHY 118 >gi|255522321|ref|ZP_05389558.1| flagellar basal body rod protein FlgG [Listeria monocytogenes FSL J1-175] Length = 107 Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 29/75 (38%) Query: 162 SVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221 S + + V+ + N T ++ G +E SN + EM Q++ + Sbjct: 25 SANQADSLVKDGEGRLHVNGINTMNLPAGQGIIQNGVIETSNVDLGVEMVQLMDNQRMVQ 84 Query: 222 SITTLIDENEKSMLE 236 + +++ +K + Sbjct: 85 ASKNVVNMFDKVYDK 99 >gi|254294559|ref|YP_003060582.1| flagellar hook-associated protein FlgK [Hirschia baltica ATCC 49814] gi|254043090|gb|ACT59885.1| flagellar hook-associated protein FlgK [Hirschia baltica ATCC 49814] Length = 714 Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 23/42 (54%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44 + L+A A + LSTV+ N++N +T G+ + F+ + Sbjct: 5 SIMATSLSALRANQSALSTVSTNVANVNTEGYTRLDTHFNSL 46 Score = 38.7 bits (88), Expect = 0.81, Method: Composition-based stats. Identities = 9/50 (18%), Positives = 21/50 (42%), Gaps = 2/50 (4%) Query: 190 SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + V ++R +E + E+ +M Q +NS + ++ +R Sbjct: 665 TEVAMRRESVEG--VSIDEELVKMTQYQQAYNSASRMMQAASDMFDTLLR 712 >gi|111115119|ref|YP_709737.1| flagellar basal body rod protein FlgB [Borrelia afzelii PKo] gi|216263868|ref|ZP_03435862.1| flagellar basal-body rod protein FlgB [Borrelia afzelii ACA-1] gi|110890393|gb|ABH01561.1| flagellar basal-body rod protein [Borrelia afzelii PKo] gi|215979912|gb|EEC20734.1| flagellar basal-body rod protein FlgB [Borrelia afzelii ACA-1] Length = 135 Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 11/32 (34%), Positives = 17/32 (53%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 L R S ++DN++N DT F+ K+ F Sbjct: 15 LDVLSLRQSVISDNIANVDTPNFKRSKISFES 46 >gi|289651639|ref|ZP_06482982.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv. aesculi str. 2250] Length = 686 Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 35/97 (36%), Gaps = 1/97 (1%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + +IGL+ A ++T+ +N +N DT G+ +V + I + + Sbjct: 1 MSLISIGLSGINASSAAINTIGNNTANVDTAGYSRQQVM-TTASAQINIGLGVGYIGTGT 59 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98 + + S++ + AL DA Sbjct: 60 TLSDVRRIYNSYLDAQLQTSTALSADAVAYSGQASKT 96 >gi|119953093|ref|YP_945302.1| flagellar basal body rod protein FlgB [Borrelia turicatae 91E135] gi|119861864|gb|AAX17632.1| flagellar basal-body rod protein FlgB [Borrelia turicatae 91E135] Length = 137 Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 20/42 (47%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 S ++ L R S +ADN++N DT F+ KV F Sbjct: 7 DRSIDLAHRYLDVLSLRQSVIADNVANVDTPNFKRSKVTFES 48 >gi|289627770|ref|ZP_06460724.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|330866430|gb|EGH01139.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 686 Score = 45.6 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 35/97 (36%), Gaps = 1/97 (1%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + +IGL+ A ++T+ +N +N DT G+ +V + I + + Sbjct: 1 MSLISIGLSGINASSAAINTIGNNTANVDTAGYSRQQVM-TTASAQINIGLGVGYIGTGT 59 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98 + + S++ + AL DA Sbjct: 60 TLSDVRRIYNSYLDAQLQTSTALSADAVAYSGQASKT 96 >gi|323527706|ref|YP_004229859.1| flagellar hook-associated protein FlgK [Burkholderia sp. CCGE1001] gi|323384708|gb|ADX56799.1| flagellar hook-associated protein FlgK [Burkholderia sp. CCGE1001] Length = 657 Score = 45.6 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 29/220 (13%), Positives = 63/220 (28%), Gaps = 9/220 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISF 58 M N+GL+ A + L+T N+SN T G+ F+E G Q +S Sbjct: 1 MSNLINLGLSGLNAAQWGLTTTGQNISNASTPGYTIETPVFAETGGQYTGSGYLPQGVST 60 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD-GRFKVTDDGSLVSA 117 V ++Y + + ++ + + T + + + Sbjct: 61 VTVTRQYSQYLTTQLNNAQSSSSSLSTYNSLISQLNNLVGSPTAGIASAITSYFTGMQNV 120 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177 + L + Q + + + T +V + ++ Sbjct: 121 ANNASSLATRQTAMSGAQTLANQINAAGQQYDALRESVNTQLSNTVSQINSYTQQIAQLN 180 Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217 + + + L SN + Q+I + Sbjct: 181 GQINAASTQGQPPNQLLDQRDLAVSN------LSQLIGVQ 214 Score = 36.0 bits (81), Expect = 4.1, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 13/37 (35%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N E ++ Q + + + +I + + Sbjct: 617 SGVNINEEAANLLQYQQLYQANSKVIQTAQTLFQTLL 653 >gi|195941352|ref|ZP_03086734.1| flagellar basal body rod protein FlgB [Borrelia burgdorferi 80a] gi|216264410|ref|ZP_03436402.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi 156a] gi|218249205|ref|YP_002374817.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi ZS7] gi|221217697|ref|ZP_03589165.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi 72a] gi|224533198|ref|ZP_03673798.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi WI91-23] gi|224533758|ref|ZP_03674346.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi CA-11.2a] gi|225549095|ref|ZP_03770070.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi 94a] gi|225550185|ref|ZP_03771145.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi 118a] gi|226320595|ref|ZP_03796155.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi 29805] gi|226321612|ref|ZP_03797138.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi Bol26] gi|1196315|gb|AAB51407.1| flagellar basal body rod protein [Borrelia burgdorferi] gi|215980883|gb|EEC21690.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi 156a] gi|218164393|gb|ACK74454.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi ZS7] gi|221192374|gb|EEE18593.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi 72a] gi|224511925|gb|EEF82326.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi WI91-23] gi|224513051|gb|EEF83414.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi CA-11.2a] gi|225369297|gb|EEG98750.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi 118a] gi|225370321|gb|EEG99759.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi 94a] gi|226232801|gb|EEH31554.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi Bol26] gi|226234014|gb|EEH32735.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi 29805] gi|312148512|gb|ADQ31171.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi JD1] gi|312149176|gb|ADQ29247.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi N40] Length = 135 Score = 45.6 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 11/32 (34%), Positives = 17/32 (53%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 L R S ++DN++N DT F+ K+ F Sbjct: 15 LDVLSLRQSVISDNIANVDTPNFKRSKISFES 46 >gi|227873538|ref|ZP_03991783.1| flagellar basal body rod protein [Oribacterium sinus F0268] gi|227840628|gb|EEJ51013.1| flagellar basal body rod protein [Oribacterium sinus F0268] Length = 136 Score = 45.6 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 6/44 (13%), Positives = 19/44 (43%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 +G++ N + + E + T+ + + T ++ + A+ Sbjct: 89 AQGYVNYPNVDILKETVDSMSATRSYEANVTALNAMKTMAQRAL 132 Score = 38.3 bits (87), Expect = 0.90, Method: Composition-based stats. Identities = 10/97 (10%), Positives = 26/97 (26%), Gaps = 14/97 (14%) Query: 12 QLALEQRLSTVADNMSNTDTV------GFRTIKVK--------FSEVVGAIKNDIDQKIS 57 A R+ A+N++N DT ++ V F + + +N + Sbjct: 1 MSAQRVRMDIAAENIANVDTTRTEAGSAYKRKDVVLESFGERSFQQALRNAQNGKGFRGQ 60 Query: 58 FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALES 94 + + + + + + Sbjct: 61 HAGVRVQGVITDDREMKRVYNPNHPDADAQGYVNYPN 97 >gi|242278491|ref|YP_002990620.1| flagellar hook-associated protein FlgK [Desulfovibrio salexigens DSM 2638] gi|242121385|gb|ACS79081.1| flagellar hook-associated protein FlgK [Desulfovibrio salexigens DSM 2638] Length = 704 Score = 45.6 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 7/37 (18%), Positives = 14/37 (37%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N EM +I + + LI ++ + + Sbjct: 664 SGVNIDEEMSNLIKYQHSYTAAAKLITTADQMLQTLL 700 Score = 40.6 bits (93), Expect = 0.18, Method: Composition-based stats. Identities = 17/79 (21%), Positives = 27/79 (34%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + N+G A A + +S DN+SN +T G+ KV+ E V N A+ Sbjct: 5 NSLLNLGTGALFASQSAISVTGDNISNVNTEGYSRRKVRLEERVSINYNPGQLGTGVRAA 64 Query: 62 GKEYLSKEVGSFISTGTEL 80 + Sbjct: 65 EVYRNFDQFVENSYNDKAT 83 >gi|332702980|ref|ZP_08423068.1| flagellar basal-body rod protein FlgC [Desulfovibrio africanus str. Walvis Bay] gi|332553129|gb|EGJ50173.1| flagellar basal-body rod protein FlgC [Desulfovibrio africanus str. Walvis Bay] Length = 147 Score = 45.6 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 10/48 (20%), Positives = 22/48 (45%), Gaps = 6/48 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43 T+ ++ + A +L+ ++ N++N +T G +R V F Sbjct: 4 MTALDVAASGLTAKRTQLNIISSNLANINTTRTAEGGPYRRKTVVFQT 51 Score = 41.8 bits (96), Expect = 0.093, Method: Composition-based stats. Identities = 8/45 (17%), Positives = 18/45 (40%), Gaps = 5/45 (11%) Query: 200 EDSNA-----NSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E N N + EM MI + + + ++ + +A++ Sbjct: 98 EFGNVRFPDINVVEEMAHMITAMRSYEANAASVESIKSMFSKALQ 142 >gi|319765009|ref|YP_004128946.1| flagellar basal body rod protein [Alicycliphilus denitrificans BC] gi|330827204|ref|YP_004390507.1| flagellar basal body rod protein [Alicycliphilus denitrificans K601] gi|317119570|gb|ADV02059.1| flagellar basal body rod protein [Alicycliphilus denitrificans BC] gi|329312576|gb|AEB86991.1| flagellar basal body rod protein [Alicycliphilus denitrificans K601] Length = 107 Score = 45.6 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 18/58 (31%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 M +I + A + RL + A N++N T GF V Sbjct: 8 MTPLASIARSGLQAAQLRLDSSAHNVANLGTPGFARQAVDQQAAPAQGGVQARTGRFG 65 >gi|218463663|ref|ZP_03503754.1| hypothetical protein RetlK5_31494 [Rhizobium etli Kim 5] Length = 106 Score = 45.6 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 8/29 (27%), Positives = 16/29 (55%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGF 34 N L+ A R+ +A+N++N+ T + Sbjct: 8 NTALSGMRAQTTRIGAIANNIANSSTPDY 36 >gi|6502601|gb|AAF14368.1|AF133240_2 flagellar proximal rod protein FlgC [Rhodobacter sphaeroides] Length = 139 Score = 45.6 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 30/87 (34%), Gaps = 6/87 (6%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDT------VGFRTIKVKFSEVVGAIKNDIDQK 55 + FN+G A A R++TVA N++N T FR ++ F Sbjct: 6 DSVFNVGARALSAQMVRMNTVASNLANAGTVSDRAETAFRPLRPVFETSYADAVGRTGLS 65 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDF 82 + VA + + + D Sbjct: 66 TTDVAGVVSLDREPARVYRPDHPQADP 92 Score = 34.8 bits (78), Expect = 9.9, Method: Composition-based stats. Identities = 4/36 (11%), Positives = 13/36 (36%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + EM +M+ ++++ + + M Sbjct: 101 VSVDEEMVEMMEASRQYQNTLEAVSTLRSLMARTAS 136 >gi|134300275|ref|YP_001113771.1| flagellar hook-associated protein FlgK [Desulfotomaculum reducens MI-1] gi|134052975|gb|ABO50946.1| flagellar hook-associated protein FlgK [Desulfotomaculum reducens MI-1] Length = 586 Score = 45.6 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 6/41 (14%), Positives = 16/41 (39%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S + E+ ++I + + +I ++ + I I Sbjct: 546 SGVSIDEELTKVIQYQYGYQACARMISMQDEMLDYLINRIR 586 Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 18/209 (8%), Positives = 49/209 (23%), Gaps = 8/209 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 I + + N++N +T G+ + S D + Sbjct: 7 GLEIAKRGTQVYRKAMDVTGHNITNANTPGYSRQEAVIS--PSTPWTRPDYLTAMTPGQL 64 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL---TRDGRFKVTDDGSLVSASGK 120 + LD + F + + + T + G ++ Sbjct: 65 GTGADVKEVRRIRDYYLDVQMRNSGSFEGYWEKKLDMAKRTETVFLEPDGRGLQLTLLNF 124 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 + + Q P + + ++ + ++ + + Sbjct: 125 FNDWQNLNNSPQDPGVKKAVKETGDELATIFRQMHNQLSNIDKTVNSSLQYQVDQVNHLT 184 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYE 209 L + + G N + + E Sbjct: 185 TRIAELSNTIINVIGNGA--QPN-DLLDE 210 >gi|124268248|ref|YP_001022252.1| flagellar hook-associated protein [Methylibium petroleiphilum PM1] gi|124261023|gb|ABM96017.1| flagellar hook-associated protein [Methylibium petroleiphilum PM1] Length = 653 Score = 45.6 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M ++G A A L T+ +N++N +T G+ +V+ G Sbjct: 1 MAGLMSLGTRAMFANYATLQTIGNNIANANTPGYSRQQVELGTAGGQSTGAG 52 >gi|225548519|ref|ZP_03769567.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi 94a] gi|225370782|gb|EEH00217.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi 94a] Length = 627 Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 16/41 (39%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E+ MI Q F + + I + + + I + Sbjct: 586 SGVNKDEELANMIEFQQAFIAASKFITVSVELIDTVINKMG 626 Score = 35.6 bits (80), Expect = 5.9, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 19/46 (41%), Gaps = 3/46 (6%) Query: 1 MQT---SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 M + IG + A + ++TV N+SN G+ +V Sbjct: 1 MDSTFSGIEIGKRSLFAHKDAMNTVGHNLSNATKPGYSRQRVTMKT 46 >gi|196044999|ref|ZP_03112232.1| flagellar basal-body rod protein FlgC [Bacillus cereus 03BB108] gi|225863603|ref|YP_002748981.1| flagellar basal-body rod protein FlgC [Bacillus cereus 03BB102] gi|229183936|ref|ZP_04311152.1| Flagellar basal-body rod protein FlgC [Bacillus cereus BGSC 6E1] gi|196024001|gb|EDX62675.1| flagellar basal-body rod protein FlgC [Bacillus cereus 03BB108] gi|225788684|gb|ACO28901.1| flagellar basal-body rod protein FlgC [Bacillus cereus 03BB102] gi|228599588|gb|EEK57192.1| Flagellar basal-body rod protein FlgC [Bacillus cereus BGSC 6E1] gi|324325762|gb|ADY21022.1| flagellar basal body rod protein FlgC [Bacillus thuringiensis serovar finitimus YBT-020] Length = 137 Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 7/40 (17%), Positives = 22/40 (55%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 G++ N + EM ++ + + + T++++ N+K + + Sbjct: 91 GYVRYPNVDVTAEMTNVMVAQKMYEANTSVLNANKKMLDK 130 Score = 41.8 bits (96), Expect = 0.094, Method: Composition-based stats. Identities = 5/33 (15%), Positives = 13/33 (39%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG 33 M + N + + + ++N+ N +T Sbjct: 1 MFQAINASGSGLTTARKWMEVTSNNIVNANTTA 33 >gi|188581884|ref|YP_001925329.1| flagellar basal body rod protein FlgC [Methylobacterium populi BJ001] gi|179345382|gb|ACB80794.1| flagellar basal-body rod protein FlgC [Methylobacterium populi BJ001] Length = 136 Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 16/109 (14%), Positives = 30/109 (27%), Gaps = 10/109 (9%) Query: 1 MQ--TSFNIGLAAQLALEQRLSTVADNMSNTD----TVG---FRTIKVKFSEVVGAIKN- 50 M S I + A R+ +A+N++N D T G +R F+ N Sbjct: 1 MDFLKSLGIAASGLKAQSGRMRIIAENIANADSAAQTPGGDPYRRKIPTFTNRFDRELNA 60 Query: 51 DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 + + + +K + + L Sbjct: 61 SVVEAGRVRRDPTPFRTKYDPGNPAADARGEVRLPNVNGLIENMDMREA 109 Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats. Identities = 11/101 (10%), Positives = 31/101 (30%) Query: 143 GEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDS 202 G + K+ + +++ V P T + + RG + Sbjct: 36 QTPGGDPYRRKIPTFTNRFDRELNASVVEAGRVRRDPTPFRTKYDPGNPAADARGEVRLP 95 Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 N N + E M + + + ++ + + + + + Sbjct: 96 NVNGLIENMDMREAQRSYEANLNMVTATRRMISRTLEILKA 136 >gi|157362948|ref|YP_001469715.1| flagellar basal-body rod protein FlgB [Thermotoga lettingae TMO] gi|157313552|gb|ABV32651.1| flagellar basal-body rod protein FlgB [Thermotoga lettingae TMO] Length = 125 Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 19/41 (46%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50 A R + A N++N +T G++ V F E++ + Sbjct: 11 TAMDVAILRQNIFAQNIANAETPGYKRKYVVFEELLNQAMS 51 >gi|229827759|ref|ZP_04453828.1| hypothetical protein GCWU000182_03151 [Abiotrophia defectiva ATCC 49176] gi|229787958|gb|EEP24072.1| hypothetical protein GCWU000182_03151 [Abiotrophia defectiva ATCC 49176] Length = 633 Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 13/38 (34%), Positives = 22/38 (57%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39 TSF +G++ A + L+ A N++N DT G+ +V Sbjct: 4 MTSFGVGVSGLNAAQNSLNATAHNITNADTKGYVRQQV 41 Score = 43.3 bits (100), Expect = 0.029, Method: Composition-based stats. Identities = 9/40 (22%), Positives = 18/40 (45%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 +S E+ MI Q FN+ + I ++ + + + S Sbjct: 594 VSSDEELTHMIKFQQAFNAASRYITVIDEMLEHVVTRLGS 633 >gi|195941912|ref|ZP_03087294.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi 80a] gi|225549791|ref|ZP_03770755.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi 118a] gi|225369599|gb|EEG99048.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi 118a] gi|312149645|gb|ADQ29716.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi N40] Length = 627 Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 16/41 (39%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E+ MI Q F + + I + + + I + Sbjct: 586 SGVNKDEELANMIEFQQAFIAASKFITVSVELIDTVINKMG 626 Score = 35.6 bits (80), Expect = 5.9, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 19/46 (41%), Gaps = 3/46 (6%) Query: 1 MQT---SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 M + IG + A + ++TV N+SN G+ +V Sbjct: 1 MDSTFSGIEIGKRSLFAHKDAMNTVGHNLSNATKPGYSRQRVTMKT 46 >gi|146335607|gb|ABQ23406.1| FlgK [Pseudomonas syringae pv. averrhoi] Length = 686 Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 35/97 (36%), Gaps = 1/97 (1%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + +IGL+ A ++T+ +N +N DT G+ +V + I + + Sbjct: 1 MSLISIGLSGINASSAAINTIGNNTANVDTAGYSRQQVM-TTASAQINIGLGVGYIGTGT 59 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98 + + S++ + AL DA Sbjct: 60 TLSDVRRIYNSYLDAQLQTSTALSADAVAYSGQASKT 96 >gi|71733906|ref|YP_275555.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv. phaseolicola 1448A] gi|298487849|ref|ZP_07005889.1| Flagellar hook-associated protein flgK [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|71554459|gb|AAZ33670.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv. phaseolicola 1448A] gi|298157574|gb|EFH98654.1| Flagellar hook-associated protein flgK [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320325100|gb|EFW81169.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv. glycinea str. B076] Length = 686 Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 35/97 (36%), Gaps = 1/97 (1%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + +IGL+ A ++T+ +N +N DT G+ +V + I + + Sbjct: 1 MSLISIGLSGINASSAAINTIGNNTANVDTAGYSRQQVM-TTASAQINIGLGVGYIGTGT 59 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98 + + S++ + AL DA Sbjct: 60 TLSDVRRIYNSYLDAQLQTSTALSADAVAYSGQASKT 96 >gi|257484939|ref|ZP_05638980.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv. tabaci ATCC 11528] gi|49205098|dbj|BAC75962.2| flagellar hook-associated protein FlgK [Pseudomonas syringae pv. tabaci] gi|330986475|gb|EGH84578.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv. lachrymans str. M301315] gi|331011049|gb|EGH91105.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 686 Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 35/97 (36%), Gaps = 1/97 (1%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + +IGL+ A ++T+ +N +N DT G+ +V + I + + Sbjct: 1 MSLISIGLSGINASSAAINTIGNNTANVDTAGYSRQQVM-TTASAQINIGLGVGYIGTGT 59 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98 + + S++ + AL DA Sbjct: 60 TLSDVRRIYNSYLDAQLQTSTALSADAVAYSGQASKT 96 >gi|224532827|ref|ZP_03673442.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi WI91-23] gi|224512216|gb|EEF82602.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi WI91-23] Length = 627 Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 16/41 (39%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E+ MI Q F + + I + + + I + Sbjct: 586 SGVNKDEELANMIEFQQAFIAASKFITVSVELIDTVINKMG 626 Score = 35.6 bits (80), Expect = 5.9, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 19/46 (41%), Gaps = 3/46 (6%) Query: 1 MQT---SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 M + IG + A + ++TV N+SN G+ +V Sbjct: 1 MDSTFSGIEIGKRSLFAHKDAMNTVGHNLSNATKPGYSRQRVTMKT 46 >gi|134280730|ref|ZP_01767440.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei 305] gi|125657215|gb|ABN48703.1| flagellar basal body protein [Burkholderia pseudomallei] gi|134247752|gb|EBA47836.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei 305] Length = 124 Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 30/94 (31%), Gaps = 2/94 (2%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69 A +R +A N++N DT G+R + F + D A Sbjct: 14 TALKLRAERTKVIASNLANLDTPGYRARDLDFKRSLAEAGGDGAHARPGDALTGGVTLGY 73 Query: 70 VGSFI--STGTELDFALEGDAWFALESPRGIILT 101 + G ++ +E A+ + LT Sbjct: 74 RVPYQAAQDGNTVELGIEQAAFAQNAVDFQMSLT 107 >gi|152985328|ref|YP_001349653.1| flagellar basal body rod protein FlgB [Pseudomonas aeruginosa PA7] gi|150960486|gb|ABR82511.1| flagellar basal-body rod protein FlgB [Pseudomonas aeruginosa PA7] Length = 135 Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 28/76 (36%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + I A QR +A+N++N DT ++ + F V+ K+ + + Sbjct: 6 DRALGIHPQALSFRAQRAEVLANNLANADTPNYKARDLDFGAVLAEQKDKAAKGTFATRT 65 Query: 62 GKEYLSKEVGSFISTG 77 E G + G Sbjct: 66 TNERHIAAEGFGMGEG 81 >gi|22127321|ref|NP_670744.1| flagellar hook-associated protein FlgK [Yersinia pestis KIM 10] gi|45442802|ref|NP_994341.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar Microtus str. 91001] gi|108809049|ref|YP_652965.1| flagellar hook-associated protein FlgK [Yersinia pestis Antiqua] gi|108810754|ref|YP_646521.1| flagellar hook-associated protein FlgK [Yersinia pestis Nepal516] gi|145597823|ref|YP_001161899.1| flagellar hook-associated protein FlgK [Yersinia pestis Pestoides F] gi|150260243|ref|ZP_01916971.1| lateral flagellar hook-associated protein 1 [Yersinia pestis CA88-4125] gi|162420194|ref|YP_001604841.1| flagellar hook-associated protein FlgK [Yersinia pestis Angola] gi|165925087|ref|ZP_02220919.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar Orientalis str. F1991016] gi|165939060|ref|ZP_02227612.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar Orientalis str. IP275] gi|166008985|ref|ZP_02229883.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar Antiqua str. E1979001] gi|166212172|ref|ZP_02238207.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar Antiqua str. B42003004] gi|167399689|ref|ZP_02305213.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167419324|ref|ZP_02311077.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425178|ref|ZP_02316931.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167466331|ref|ZP_02331035.1| flagellar hook-associated protein FlgK [Yersinia pestis FV-1] gi|218927918|ref|YP_002345793.1| flagellar hook-associated protein FlgK [Yersinia pestis CO92] gi|229837414|ref|ZP_04457577.1| Flagellar hook-associated protein flgK [Yersinia pestis Pestoides A] gi|229840629|ref|ZP_04460788.1| Flagellar hook-associated protein flgK [Yersinia pestis biovar Orientalis str. PEXU2] gi|229842820|ref|ZP_04462972.1| Flagellar hook-associated protein flgK [Yersinia pestis biovar Orientalis str. India 195] gi|229900951|ref|ZP_04516075.1| Flagellar hook-associated protein flgK [Yersinia pestis Nepal516] gi|270487666|ref|ZP_06204740.1| flagellar hook-associated protein FlgK [Yersinia pestis KIM D27] gi|294502794|ref|YP_003566856.1| flagellar hook-associated protein [Yersinia pestis Z176003] gi|21960402|gb|AAM86995.1|AE013948_3 putative flagellar hook-associated protein [Yersinia pestis KIM 10] gi|45437668|gb|AAS63218.1| putative flagellar hook-associated protein [Yersinia pestis biovar Microtus str. 91001] gi|108774402|gb|ABG16921.1| flagellar hook-associated protein [Yersinia pestis Nepal516] gi|108780962|gb|ABG15020.1| putative flagellar hook-associated protein [Yersinia pestis Antiqua] gi|115346529|emb|CAL19406.1| putative flagellar hook-associated protein [Yersinia pestis CO92] gi|145209519|gb|ABP38926.1| flagellar hook-associated protein [Yersinia pestis Pestoides F] gi|149289651|gb|EDM39728.1| lateral flagellar hook-associated protein 1 [Yersinia pestis CA88-4125] gi|162353009|gb|ABX86957.1| flagellar hook-associated protein FlgK [Yersinia pestis Angola] gi|165913016|gb|EDR31641.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar Orientalis str. IP275] gi|165923287|gb|EDR40438.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar Orientalis str. F1991016] gi|165992324|gb|EDR44625.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar Antiqua str. E1979001] gi|166206918|gb|EDR51398.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar Antiqua str. B42003004] gi|166963318|gb|EDR59339.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167052193|gb|EDR63601.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167055941|gb|EDR65722.1| flagellar hook-associated protein FlgK [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229682290|gb|EEO78382.1| Flagellar hook-associated protein flgK [Yersinia pestis Nepal516] gi|229690087|gb|EEO82144.1| Flagellar hook-associated protein flgK [Yersinia pestis biovar Orientalis str. India 195] gi|229696995|gb|EEO87042.1| Flagellar hook-associated protein flgK [Yersinia pestis biovar Orientalis str. PEXU2] gi|229705537|gb|EEO91547.1| Flagellar hook-associated protein flgK [Yersinia pestis Pestoides A] gi|262360826|gb|ACY57547.1| flagellar hook-associated protein [Yersinia pestis D106004] gi|262364771|gb|ACY61328.1| flagellar hook-associated protein [Yersinia pestis D182038] gi|270336170|gb|EFA46947.1| flagellar hook-associated protein FlgK [Yersinia pestis KIM D27] gi|294353253|gb|ADE63594.1| flagellar hook-associated protein [Yersinia pestis Z176003] gi|320016705|gb|ADW00277.1| Flagellar hook-associated protein flgK [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 453 Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 7/53 (13%), Positives = 20/53 (37%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54 + A + L+ + N++N T G+ + + S + + ++ Sbjct: 1 MNFIRTAFSGMQATQAHLNATSMNIANMHTPGYSRQRAEQSAIGADGQGGVNA 53 Score = 38.7 bits (88), Expect = 0.74, Method: Composition-based stats. Identities = 6/37 (16%), Positives = 15/37 (40%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N+ E ++ + + S +I +K + + Sbjct: 414 SGVNNDEEAMNLMEYQRAYQSNMKVIATGDKLFSDLL 450 >gi|330875990|gb|EGH10139.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 686 Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 35/97 (36%), Gaps = 1/97 (1%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + +IGL+ A ++T+ +N +N DT G+ +V + I + + Sbjct: 1 MSLISIGLSGINASSAAINTIGNNTANVDTAGYSRQQVM-TTASAQINIGLGVGYIGTGT 59 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98 + + ++ + AL DA I Sbjct: 60 TLSDVRRIYNGYLDAQLQTSTALSADAVAYSGQASKI 96 >gi|269836594|ref|YP_003318822.1| flagellar hook-associated protein FlgK [Sphaerobacter thermophilus DSM 20745] gi|269785857|gb|ACZ38000.1| flagellar hook-associated protein FlgK [Sphaerobacter thermophilus DSM 20745] Length = 471 Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 7/36 (19%), Positives = 13/36 (36%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 L A ++ + N++N +T GF Sbjct: 8 LETLLRALQTQQRAVDVTNHNIANANTPGFSRQVAA 43 Score = 44.5 bits (103), Expect = 0.012, Method: Composition-based stats. Identities = 4/40 (10%), Positives = 14/40 (35%) Query: 200 EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E + + E +I + + + ++ + + I Sbjct: 425 EVAGVSLDEEAVNLIKYQHAYQAAARAMTVVDEMLDKLIN 464 >gi|15594526|ref|NP_212315.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi B31] gi|216264299|ref|ZP_03436291.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi 156a] gi|221217529|ref|ZP_03588999.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi 72a] gi|223889273|ref|ZP_03623861.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi 64b] gi|226321499|ref|ZP_03797025.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi Bol26] gi|3915691|sp|P70859|FLGK_BORBU RecName: Full=Flagellar hook-associated protein 1; Short=HAP1 gi|2688082|gb|AAC66579.1| flagellar hook-associated protein (flgK) [Borrelia burgdorferi B31] gi|215980772|gb|EEC21579.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi 156a] gi|221192592|gb|EEE18809.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi 72a] gi|223885306|gb|EEF56408.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi 64b] gi|226232688|gb|EEH31441.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi Bol26] gi|312148243|gb|ADQ30902.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi JD1] Length = 627 Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 16/41 (39%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E+ MI Q F + + I + + + I + Sbjct: 586 SGVNKDEELANMIEFQQAFIAASKFITVSVELIDTVINKMG 626 Score = 35.6 bits (80), Expect = 6.0, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 19/46 (41%), Gaps = 3/46 (6%) Query: 1 MQT---SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 M + IG + A + ++TV N+SN G+ +V Sbjct: 1 MDSTFSGIEIGKRSLFAHKDAMNTVGHNLSNATKPGYSRQRVTMKT 46 >gi|330967097|gb|EGH67357.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv. actinidiae str. M302091] Length = 686 Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 16/97 (16%), Positives = 34/97 (35%), Gaps = 1/97 (1%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + +IGL+ A ++T+ +N +N DT G+ +V + I + + Sbjct: 1 MSLISIGLSGINASSAAINTIGNNTANVDTAGYSRQQVM-TTASAQINIGLGVGYIGTGT 59 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98 + + ++ + AL DA Sbjct: 60 TLSDVRRIYNGYLDAQLQTSTALSADAVAYSGQASKT 96 >gi|224417697|ref|ZP_03655703.1| flagellar basal body rod protein FlgC [Helicobacter canadensis MIT 98-5491] gi|253827046|ref|ZP_04869931.1| flagellar basal body rod protein [Helicobacter canadensis MIT 98-5491] gi|313141240|ref|ZP_07803433.1| flagellar basal body rod protein FlgC [Helicobacter canadensis MIT 98-5491] gi|253510452|gb|EES89111.1| flagellar basal body rod protein [Helicobacter canadensis MIT 98-5491] gi|313130271|gb|EFR47888.1| flagellar basal body rod protein FlgC [Helicobacter canadensis MIT 98-5491] Length = 166 Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 18/43 (41%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N++ EM +I T+ + + + AI Sbjct: 120 GYVAYPNINAVVEMADLIEATKAYQANVAAFQSAKNMANNAIS 162 Score = 39.1 bits (89), Expect = 0.61, Method: Composition-based stats. Identities = 9/31 (29%), Positives = 18/31 (58%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32 +SF+I A QR++ ++ N++N +T Sbjct: 3 LSSFDISGYGLSAQRQRVNLISSNIANANTT 33 >gi|218249283|ref|YP_002374709.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi ZS7] gi|218164471|gb|ACK74532.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi ZS7] Length = 627 Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 16/41 (39%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E+ MI Q F + + I + + + I + Sbjct: 586 SGVNKDEELANMIEFQQAFIAASKFITVSVELIDTVINKMG 626 Score = 35.6 bits (80), Expect = 6.0, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 19/46 (41%), Gaps = 3/46 (6%) Query: 1 MQT---SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 M + IG + A + ++TV N+SN G+ +V Sbjct: 1 MDSTFSGIEIGKRSLFAHKDAMNTVGHNLSNATKPGYSRQRVTMKT 46 >gi|325921022|ref|ZP_08182904.1| flagellar basal-body rod protein FlgC [Xanthomonas gardneri ATCC 19865] gi|325548504|gb|EGD19476.1| flagellar basal-body rod protein FlgC [Xanthomonas gardneri ATCC 19865] Length = 135 Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 6/43 (13%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ + + + +M MI ++ + + +++ ++ L I Sbjct: 90 GYVFSPDVDPVAQMVNMISASRNYQAGVEMLNTAKELALATIT 132 Score = 35.6 bits (80), Expect = 6.7, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 31/84 (36%), Gaps = 8/84 (9%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKISF 58 F++ +A A RLST+A N++N D+V ++ I+ F + D Sbjct: 7 FDVAGSALHAQSVRLSTIASNLANADSVAGSAEATYKPIEPIFQA--RQNRQDPSLTSVN 64 Query: 59 VASGKEYLSKEVGSFISTGTELDF 82 V + + + D Sbjct: 65 VKEITTTNAPPIRRYEPGHPLADA 88 >gi|51894141|ref|YP_076832.1| flagella basal body rod protein [Symbiobacterium thermophilum IAM 14863] gi|51857830|dbj|BAD41988.1| flagella basal body rod protein [Symbiobacterium thermophilum IAM 14863] Length = 147 Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 25/78 (32%), Gaps = 13/78 (16%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVK-------FSEVVGA 47 M + +A A R+ +A+N++N T G +R V F+ + Sbjct: 3 MFQAMEASASALTAERLRMDVIANNLANYRTTRTAEGGPYRRRTVVVEERPNTFASELAR 62 Query: 48 IKNDIDQKISFVASGKEY 65 + V + Sbjct: 63 QAGRPAEPGLGVRVTQIV 80 Score = 42.5 bits (98), Expect = 0.046, Method: Composition-based stats. Identities = 7/46 (15%), Positives = 20/46 (43%), Gaps = 1/46 (2%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G + N + + E+ ++ + +++ T + + L A+ I Sbjct: 102 GIVRLPNVDLLQEITDLMLAQRMYDANLTAFNAAKNMALRAL-EIG 146 >gi|238794003|ref|ZP_04637621.1| hypothetical protein yinte0001_21180 [Yersinia intermedia ATCC 29909] gi|238726635|gb|EEQ18171.1| hypothetical protein yinte0001_21180 [Yersinia intermedia ATCC 29909] Length = 555 Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 1/44 (2%) Query: 1 MQTSF-NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 M S N ++ A + LSTV++N++N G+ F++ Sbjct: 1 MSNSLMNTAMSGLSAAQYALSTVSNNITNFQVAGYNRQNTIFAQ 44 >gi|91791420|ref|YP_561071.1| putative flagellar basal body rod protein FlgC [Shewanella denitrificans OS217] gi|91713422|gb|ABE53348.1| putative flagellar basal body rod protein FlgC [Shewanella denitrificans OS217] Length = 127 Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 7/48 (14%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 K+GF+ + + +EM + + + + + + ++ +A+ I Sbjct: 80 KQGFIYMPDIDLAHEMVTLSSAKRAYEANIKVYNSYKEMSAKAL-EIG 126 >gi|329849966|ref|ZP_08264812.1| flagellar hook-associated protein FlgK [Asticcacaulis biprosthecum C19] gi|328841877|gb|EGF91447.1| flagellar hook-associated protein FlgK [Asticcacaulis biprosthecum C19] Length = 713 Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 10/32 (31%), Positives = 21/32 (65%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGF 34 + NIG++ + +++L +DN+SN +T G+ Sbjct: 5 SIMNIGVSGLMTAQEQLRITSDNISNVNTPGY 36 >gi|117621022|ref|YP_857346.1| flagellar basal-body rod protein FlgB [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117562429|gb|ABK39377.1| flagellar basal-body rod protein FlgB [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 132 Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 13/98 (13%), Positives = 32/98 (32%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 +R ++ N++N DT GF+ + FS+ + + ++ + L + Sbjct: 16 LSVRSKRAEVLSSNIANADTPGFKARDINFSQALEEAQQQQGFGLATTSEKHFALQMDAP 75 Query: 72 SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109 L ++ R L ++ + Sbjct: 76 GVTQYRNPLQPDTGDGNTVDVQQERSEFLRNSLEYQTS 113 >gi|28869148|ref|NP_791767.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv. tomato str. DC3000] gi|213967575|ref|ZP_03395723.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv. tomato T1] gi|301385720|ref|ZP_07234138.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv. tomato Max13] gi|302060067|ref|ZP_07251608.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv. tomato K40] gi|302134826|ref|ZP_07260816.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28852388|gb|AAO55462.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv. tomato str. DC3000] gi|213927876|gb|EEB61423.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv. tomato T1] gi|331017018|gb|EGH97074.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 686 Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 16/97 (16%), Positives = 34/97 (35%), Gaps = 1/97 (1%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + +IGL+ A ++T+ +N +N DT G+ +V + I + + Sbjct: 1 MSLISIGLSGINASSAAINTIGNNTANVDTAGYSRQQVM-TTASAQINIGLGVGYIGTGT 59 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98 + + ++ + AL DA Sbjct: 60 TLSDVRRIYNGYLDAQLQTSTALSADAVAYSGQASKT 96 >gi|163789663|ref|ZP_02184101.1| Flagellar hook-associated protein [Carnobacterium sp. AT7] gi|159875195|gb|EDP69261.1| Flagellar hook-associated protein [Carnobacterium sp. AT7] Length = 361 Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 16/167 (9%), Positives = 38/167 (22%), Gaps = 10/167 (5%) Query: 86 GDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEK 145 G +F L + + + + + Q + Sbjct: 194 GTDFFDLSETVDGNYAASIQVNKEILNDVSKINAGKNIETVVGGDGTRAQAIAALQNTKL 253 Query: 146 GEISQKGKVIATMGLYSVDM-SQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFL----E 200 + ++ ++D G S + + +G L E Sbjct: 254 DYSTNPLELKYNETTMTIDNQPGGSTVAGAYNDSVTQMGIVKQQSDNMVDSQGSLVSLLE 313 Query: 201 D-----SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S + E+ I F + + +I + + I Sbjct: 314 ARRDSVSGVSINEEVTNTITYQSAFEANSRIISVVSEMLDTLINRTG 360 >gi|320329359|gb|EFW85352.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv. glycinea str. race 4] Length = 686 Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 35/97 (36%), Gaps = 1/97 (1%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + +IGL+ A ++T+ +N +N DT G+ +V + I + + Sbjct: 1 MSLISIGLSGINASSAAINTIGNNTANVDTAGYSRQQVM-TTASAQINIGLGVGYIGTGT 59 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98 + + S++ + AL DA Sbjct: 60 TLSDVRRIYNSYLDAQLQTSTALSADAVAYSGQASKT 96 >gi|302878282|ref|YP_003846846.1| flagellar hook-associated protein FlgK [Gallionella capsiferriformans ES-2] gi|302581071|gb|ADL55082.1| flagellar hook-associated protein FlgK [Gallionella capsiferriformans ES-2] Length = 646 Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 1/40 (2%) Query: 1 MQTSFNIG-LAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39 M ++ L+ A + LST N++N +T G+ + Sbjct: 1 MGSNIYSASLSGMNAAQFALSTTQHNIANANTPGYSRQTM 40 Score = 35.2 bits (79), Expect = 8.3, Method: Composition-based stats. Identities = 12/158 (7%), Positives = 31/158 (19%), Gaps = 6/158 (3%) Query: 82 FALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFN 141 A+ G + P G + + + + Sbjct: 492 PAVAGAVAYTEGVPITYNGWTATITGTPAAGDVFNVKSNTTATGDNRNALLMAALQTQNL 551 Query: 142 VGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLED 201 + G + S G +E S + ++ G Sbjct: 552 LASSGGVGANATTNLQGAYSQFVGSIGAKTQELLVTSTAQDAMVTQTVATQQSVSG---- 607 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 N E ++ + + + + + Sbjct: 608 --VNLDEEAANLLRYQRAYQAAAKAMQIANTMFDSLLT 643 >gi|296103614|ref|YP_003613760.1| Flagellar basal-body rod protein FlgB [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058073|gb|ADF62811.1| Flagellar basal-body rod protein FlgB [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 136 Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 26/68 (38%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A L +R +A N++N DT G++ + F++ + A + S V+ Sbjct: 14 ALGLLSRRQDILASNIANADTPGYKARDIDFTQQLKAAMENNAMAKSPVSLSLTSNKHIE 73 Query: 71 GSFISTGT 78 G Sbjct: 74 GKARPFDD 81 >gi|94495414|ref|ZP_01301994.1| flagellar proximal rod protein [Sphingomonas sp. SKA58] gi|94424802|gb|EAT09823.1| flagellar proximal rod protein [Sphingomonas sp. SKA58] Length = 123 Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 26/72 (36%), Gaps = 2/72 (2%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV--GAIKNDIDQKISFVASGKEYLSK 68 A QRLS +A N++N T G++ + F + ++ + ++ + Sbjct: 14 ALALRSQRLSLLASNIANASTPGYKARDIDFEAALKEATAQSSGATSTDMGKAVEDAMGY 73 Query: 69 EVGSFISTGTEL 80 V S Sbjct: 74 RVPLQPSLDGNT 85 >gi|227876736|ref|ZP_03994845.1| flagellar basal body rod protein [Mobiluncus mulieris ATCC 35243] gi|306817683|ref|ZP_07451425.1| flagella basal body rod protein [Mobiluncus mulieris ATCC 35239] gi|227842633|gb|EEJ52833.1| flagellar basal body rod protein [Mobiluncus mulieris ATCC 35243] gi|304649497|gb|EFM46780.1| flagella basal body rod protein [Mobiluncus mulieris ATCC 35239] Length = 106 Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 27/65 (41%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69 A L R +ADN++N T GF KV+F + + + + + +A+ + Sbjct: 3 TALDGLSMRQRVIADNIANIQTPGFLAGKVRFEDELARATRFGNPQSAHIATARSLEPTR 62 Query: 70 VGSFI 74 + Sbjct: 63 IDGNN 67 >gi|163760754|ref|ZP_02167834.1| probable flagellar basal body rod protein [Hoeflea phototrophica DFL-43] gi|162282076|gb|EDQ32367.1| probable flagellar basal body rod protein [Hoeflea phototrophica DFL-43] Length = 112 Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 24/58 (41%), Gaps = 1/58 (1%) Query: 1 MQTSF-NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS 57 M +S N + A +R+ +A N++N DT + V+ G + ++ Sbjct: 1 MISSIINTAFSGMAAQSKRMDAIASNVANVDTPDYNRKTVEMVTTAGGGVRAVPREAP 58 >gi|316932833|ref|YP_004107815.1| flagellar basal body rod protein [Rhodopseudomonas palustris DX-1] gi|315600547|gb|ADU43082.1| flagellar basal body rod protein [Rhodopseudomonas palustris DX-1] Length = 136 Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 12/72 (16%), Positives = 26/72 (36%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69 +QR +ADN++N+DT GF+ + + + + + + + Sbjct: 14 TRMQWHQQRQRVLADNIANSDTPGFKPLDLVAPTFDPSGRPTAGSPVGSLPMMRTSAVHI 73 Query: 70 VGSFISTGTELD 81 S + D Sbjct: 74 APSGGTESFSQD 85 >gi|149203101|ref|ZP_01880072.1| flagellar hook-associated protein K [Roseovarius sp. TM1035] gi|149143647|gb|EDM31683.1| flagellar hook-associated protein K [Roseovarius sp. TM1035] Length = 482 Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 7/32 (21%), Positives = 17/32 (53%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGF 34 ++ + L+ A + + ++ N++N T GF Sbjct: 5 SALSSALSGLAANTRAVDVISGNLANALTEGF 36 Score = 36.8 bits (83), Expect = 2.6, Method: Composition-based stats. Identities = 6/36 (16%), Positives = 17/36 (47%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +S E+ +++ + Q F + +I + + +R Sbjct: 446 VDSDAELQRLLLVEQAFGANARMIQTIDDLLDTLLR 481 >gi|91776315|ref|YP_546071.1| flagellar hook-associated protein FlgK [Methylobacillus flagellatus KT] gi|91710302|gb|ABE50230.1| Flagellar hook-associated protein [Methylobacillus flagellatus KT] Length = 645 Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 16/83 (19%), Positives = 25/83 (30%), Gaps = 1/83 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M FNIG A A + +ST N++N +T G+ + +V A + Sbjct: 1 MSNIFNIGKTALNAAQVGISTTGHNIANANTEGY-SRQVIVQSAGQAQAWGFGYLGNGTQ 59 Query: 61 SGKEYLSKEVGSFISTGTELDFA 83 A Sbjct: 60 VDTVKRVYNELLSRQISNSQSIA 82 Score = 36.0 bits (81), Expect = 4.6, Method: Composition-based stats. Identities = 6/45 (13%), Positives = 15/45 (33%), Gaps = 3/45 (6%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 ++G +S N E +I Q + + ++ + Sbjct: 602 QQG---ESGVNLDEEAVNLIRYQQAYQAAGKVMQIASTLFETVLS 643 >gi|121997322|ref|YP_001002109.1| flagellar basal-body rod protein FlgB [Halorhodospira halophila SL1] gi|121588727|gb|ABM61307.1| flagellar basal-body rod protein FlgB [Halorhodospira halophila SL1] Length = 135 Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 12/71 (16%), Positives = 22/71 (30%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A +R +A N++N DT G++ + F E + Q + + Sbjct: 15 AMRLRGERNELLASNIANADTPGYKARDMDFREAMRQASEPQPQPLQATSPQHVQPPPSS 74 Query: 71 GSFISTGTELD 81 L Sbjct: 75 SMAAGDPKSLY 85 >gi|315635632|ref|ZP_07890895.1| flagellar hook-associated protein FlgK [Arcobacter butzleri JV22] gi|315479929|gb|EFU70599.1| flagellar hook-associated protein FlgK [Arcobacter butzleri JV22] Length = 636 Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 31/78 (39%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 FN+ A + TV++N++N DT G++ SE+ + + ++ + Sbjct: 7 FNVAQTGLNASRYGIETVSNNIANKDTDGYKKRVTDLSEIGQMGSSITGRGVNVDGVSRV 66 Query: 65 YLSKEVGSFISTGTELDF 82 ++ T+ + Sbjct: 67 TSQYLYDNYTKEYTKTSY 84 Score = 40.6 bits (93), Expect = 0.20, Method: Composition-based stats. Identities = 4/35 (11%), Positives = 15/35 (42%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 + EM ++ L +++ +I ++ + + Sbjct: 598 VDEDDEMVNLMKLQAAYSANAQMITAVDEMIKVIL 632 >gi|167905087|ref|ZP_02492292.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei NCTC 13177] Length = 134 Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 30/100 (30%), Gaps = 4/100 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + A + +A N++N DT G+R + F + D A Sbjct: 20 GLHPAALKLRAERTK--VIASNLANLDTPGYRARDLDFKRSLAEAGGDGAHARPGDALTG 77 Query: 64 EYLSKEVGSFI--STGTELDFALEGDAWFALESPRGIILT 101 + G ++ +E A+ + LT Sbjct: 78 GVTLGYRVPYQAAQDGNTVELGIEQAAFAQNAVDFQMSLT 117 >gi|313681828|ref|YP_004059566.1| flagellar hook-associated protein flgk [Sulfuricurvum kujiense DSM 16994] gi|313154688|gb|ADR33366.1| flagellar hook-associated protein FlgK [Sulfuricurvum kujiense DSM 16994] Length = 615 Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 12/67 (17%), Positives = 25/67 (37%), Gaps = 1/67 (1%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 + +IG + A + + T N+SN +T G+ +V + + D Q+ Sbjct: 6 NALHIGYSGLNAAQIGIDTTGHNISNAETEGYTRQRVV-TAAAAPLGVDPGQRGGGTQVT 64 Query: 63 KEYLSKE 69 + Sbjct: 65 DITRIFD 71 Score = 42.5 bits (98), Expect = 0.044, Method: Composition-based stats. Identities = 10/72 (13%), Positives = 23/72 (31%) Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 V R + + I ++K+ S + EM +I + + + Sbjct: 540 DNLVTRVGTRTNSAIVSNDSITAQFNSIKQEQDSISKVSIDEEMANLIRYQTSYGAAAKV 599 Query: 227 IDENEKSMLEAI 238 I ++ M + Sbjct: 600 ITTIDQMMTTLL 611 >gi|126462486|ref|YP_001043600.1| flagellar basal-body rod protein FlgC [Rhodobacter sphaeroides ATCC 17029] gi|126104150|gb|ABN76828.1| flagellar basal-body rod protein FlgC [Rhodobacter sphaeroides ATCC 17029] Length = 138 Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 30/87 (34%), Gaps = 6/87 (6%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDT------VGFRTIKVKFSEVVGAIKNDIDQK 55 + F++G A A R++TVA N++N T FR ++ F Sbjct: 5 DSVFDVGARALSAQMVRMNTVASNLANAGTVSDKAETAFRPLRPVFETSYADAVGRTGLS 64 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDF 82 + VA + + + D Sbjct: 65 TTDVAGVVSLDREPARVYRPDHPQADP 91 Score = 35.6 bits (80), Expect = 6.0, Method: Composition-based stats. Identities = 4/36 (11%), Positives = 13/36 (36%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + EM +M+ ++++ + + M Sbjct: 100 VSVDEEMVEMMEASRQYQNTLEAVSTLRSLMARTAS 135 >gi|326392863|ref|ZP_08214093.1| protein of unknown function DUF1078 domain protein [Thermoanaerobacter ethanolicus JW 200] gi|325991095|gb|EGD49857.1| protein of unknown function DUF1078 domain protein [Thermoanaerobacter ethanolicus JW 200] Length = 89 Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 6/41 (14%), Positives = 16/41 (39%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S + EM M+ + + + +I ++ + I + Sbjct: 45 SGVSLDEEMTNMLKYQKSYVASARVITVMDELLDTLINRMG 85 >gi|296282282|ref|ZP_06860280.1| flagellar basal-body rod protein FlgB [Citromicrobium bathyomarinum JL354] Length = 115 Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 13/77 (16%), Positives = 28/77 (36%), Gaps = 1/77 (1%) Query: 1 MQTSFN-IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFV 59 M I AA QR++ + N++N T G++ + F + A + + + Sbjct: 1 MNEGLFGIHGAALEIRAQRMAVLGSNIANAGTPGYKARDIDFGAALQARLAGSESEGAAQ 60 Query: 60 ASGKEYLSKEVGSFIST 76 + + +T Sbjct: 61 RATVYRIPTMASLDGNT 77 >gi|262276420|ref|ZP_06054229.1| flagellar basal-body rod protein FlgB [Grimontia hollisae CIP 101886] gi|262220228|gb|EEY71544.1| flagellar basal-body rod protein FlgB [Grimontia hollisae CIP 101886] Length = 131 Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 11/37 (29%), Positives = 21/37 (56%) Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 QR T+A N++N +T G++ V F + + A + + Sbjct: 21 QRAETLASNLANANTPGYKAQDVDFEQALQAATSGAN 57 >gi|148256779|ref|YP_001241364.1| flagellar basal body rod protein FlgC [Bradyrhizobium sp. BTAi1] gi|146408952|gb|ABQ37458.1| flagellar basal-body rod protein FlgC (cell-proximal rod protein) [Bradyrhizobium sp. BTAi1] Length = 141 Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 7/49 (14%), Positives = 19/49 (38%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G ++ N N + EM M + + + +I + + + + + Sbjct: 93 ASGNVKYPNVNPLVEMTDMRDAQRSYEANLNIIGATRRMIQRTLDILKT 141 Score = 44.9 bits (104), Expect = 0.009, Method: Composition-based stats. Identities = 10/55 (18%), Positives = 22/55 (40%), Gaps = 7/55 (12%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKN 50 S +I + A R+ +++N++N D+ +R FS + + Sbjct: 10 RSMSIATSGLRAQAGRMRVISENIANADSTAAKAGGDPYRRKVPTFSSALDRALD 64 >gi|167725928|ref|ZP_02409164.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei DM98] gi|167905088|ref|ZP_02492293.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei NCTC 13177] Length = 125 Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 19/42 (45%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G + N N + EM M+ ++ +++ ++ LE + Sbjct: 80 GNVLYPNVNPVEEMTDMLSASRAYSTNVEVLGRVNGMQLELL 121 Score = 36.8 bits (83), Expect = 2.5, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 34/94 (36%), Gaps = 7/94 (7%) Query: 12 QLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65 A RL+T+A N++N D+ +R K F+ + + + Sbjct: 1 MSAQTVRLNTIASNLANADSASGTEDATYRARKPVFASIFQLDAQGEPRGAAVQVLDVVK 60 Query: 66 LSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 ++ + G L A EG+ + +P + Sbjct: 61 STEPLRKVHQPGHPLADA-EGNVLYPNVNPVEEM 93 >gi|313610105|gb|EFR85430.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes FSL F2-208] Length = 133 Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 11/104 (10%), Positives = 29/104 (27%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 L+ V++N++N +T F+ + F E +G+ Q A + + Sbjct: 12 LNYLQTANQVVSNNIANANTPNFKASEASFEESLGSSLRASGQNSIESAGNLTKTNTKHL 71 Query: 72 SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115 + + + + + + Sbjct: 72 AGTDIDETNAKVTTKSGSINEDGNNVNVTSEMISLTKNNQMYAL 115 >gi|254853086|ref|ZP_05242434.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes FSL R2-503] gi|255521220|ref|ZP_05388457.1| flagellar basal body rod protein FlgB [Listeria monocytogenes FSL J1-175] gi|300764523|ref|ZP_07074516.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes FSL N1-017] gi|258606435|gb|EEW19043.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes FSL R2-503] gi|300514877|gb|EFK41931.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes FSL N1-017] Length = 133 Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 11/104 (10%), Positives = 30/104 (28%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 L+ V++N++N +T F+ + F E +G+ Q + A + + Sbjct: 12 LNYLQTANQVVSNNIANANTPNFKASEASFEESLGSSLRASGQNSTESAGNLTKTNTKHL 71 Query: 72 SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115 + + + + + + Sbjct: 72 AGTEIDETNAKVTTKSGSINEDGNNVNVTSEMISLTKNNQMYAL 115 >gi|58039961|ref|YP_191925.1| flagellar basal body rod protein FlgC [Gluconobacter oxydans 621H] gi|58002375|gb|AAW61269.1| Flagellar basal-body rod protein FlgC [Gluconobacter oxydans 621H] Length = 135 Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 25/77 (32%), Gaps = 7/77 (9%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQKISFV 59 I + A QRL VA+N++N DT G +R + F+E V + V Sbjct: 9 ISASGMDAQAQRLRIVAENLANQDTTGSQPGADPYRRKTITFAEHVDDETGASTVDVQNV 68 Query: 60 ASGKEYLSKEVGSFIST 76 Sbjct: 69 GQDMSDFDTRYDPSHPA 85 Score = 43.3 bits (100), Expect = 0.030, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 18/42 (42%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G+++ SN +SM EM M + + + + + + Sbjct: 90 GYVKVSNVDSMTEMMDMREAERSYEANLNALSSTRTMLSRTL 131 >gi|91976172|ref|YP_568831.1| flagellar basal body rod protein FlgC [Rhodopseudomonas palustris BisB5] gi|91682628|gb|ABE38930.1| flagellar basal-body rod protein FlgC [Rhodopseudomonas palustris BisB5] Length = 141 Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 8/49 (16%), Positives = 21/49 (42%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G ++ N NS+ EM M + + + + +I + + + + + Sbjct: 93 AAGNVKYPNVNSVIEMTDMRNAQRSYEANLNVISATRRMIQRTLDILKA 141 Score = 41.4 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 10/55 (18%), Positives = 21/55 (38%), Gaps = 7/55 (12%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSN----TDTVG---FRTIKVKFSEVVGAIKN 50 S I + A R+ +++N++N T G +R F+ + + Sbjct: 10 RSMGIATSGLRAQAGRMRVISENIANAESTAQTAGGDPYRRKVPTFTSALDRSLD 64 >gi|325274805|ref|ZP_08140832.1| flagellar basal body rod protein FlgB [Pseudomonas sp. TJI-51] gi|324100050|gb|EGB97869.1| flagellar basal body rod protein FlgB [Pseudomonas sp. TJI-51] Length = 136 Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 26/64 (40%) Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76 QR +A+N++N DT ++ + FS V+ A + + + G ++ Sbjct: 21 QRAEVLANNIANADTPNYKARDMDFSSVLAAETSKQQSGRFAMERTNSRHIEAEGLAVAA 80 Query: 77 GTEL 80 L Sbjct: 81 DDTL 84 >gi|255022491|ref|ZP_05294477.1| flagellar basal body rod protein FlgB [Listeria monocytogenes FSL J1-208] Length = 133 Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 10/45 (22%), Positives = 20/45 (44%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56 L+ V++N++N +T F+ + F E +G+ Q Sbjct: 12 LNYLQTANQVVSNNIANANTPNFKASEASFEESLGSSLRASGQNS 56 >gi|51597631|ref|YP_071822.1| flagellar hook-associated protein FlgK [Yersinia pseudotuberculosis IP 32953] gi|186896765|ref|YP_001873877.1| flagellar hook-associated protein FlgK [Yersinia pseudotuberculosis PB1/+] gi|51590913|emb|CAH22569.1| putative flagellar hook-associated protein [Yersinia pseudotuberculosis IP 32953] gi|186699791|gb|ACC90420.1| flagellar hook-associated protein FlgK [Yersinia pseudotuberculosis PB1/+] Length = 453 Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 7/53 (13%), Positives = 20/53 (37%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54 + A + L+ + N++N T G+ + + S + + ++ Sbjct: 1 MNFIRTAFSGMQATQAHLNATSMNIANMHTPGYSRQRAEQSAIGADGQGGVNA 53 Score = 38.3 bits (87), Expect = 0.85, Method: Composition-based stats. Identities = 6/37 (16%), Positives = 15/37 (40%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N+ E ++ + + S +I +K + + Sbjct: 414 SGVNNDEEAMNLMEYQRAYQSNMKVIATGDKLFSDLL 450 >gi|222147569|ref|YP_002548526.1| flagellar basal body rod protein FlgC [Agrobacterium vitis S4] gi|221734557|gb|ACM35520.1| flagellar basal-body rod protein [Agrobacterium vitis S4] Length = 145 Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 12/101 (11%), Positives = 31/101 (30%) Query: 143 GEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDS 202 G + K I V+ + G + + + +G+++ Sbjct: 43 DTPGANPYRRKTITFGSEMDRATGTEIVKVKKLGFDKSNFTEEYDPSNPAADAKGYVKMP 102 Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 N N + EM M + + + + + + + + S Sbjct: 103 NVNVLIEMADMREANRTYEANLQSVKQTRDLITSTLDLLKS 143 Score = 42.9 bits (99), Expect = 0.036, Method: Composition-based stats. Identities = 14/105 (13%), Positives = 33/105 (31%), Gaps = 8/105 (7%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKF-SEVVGAIKNDIDQ 54 ++ I + RL V++N++N + G +R + F SE+ A +I + Sbjct: 12 SALKIAGSGLDVQSTRLRIVSENIANAQSTGDTPGANPYRRKTITFGSEMDRATGTEIVK 71 Query: 55 KISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 + + S + + + + Sbjct: 72 VKKLGFDKSNFTEEYDPSNPAADAKGYVKMPNVNVLIEMADMREA 116 >gi|160896073|ref|YP_001561655.1| flagellar hook-associated protein FlgK [Delftia acidovorans SPH-1] gi|160361657|gb|ABX33270.1| flagellar hook-associated protein FlgK [Delftia acidovorans SPH-1] Length = 642 Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 16/40 (40%) Query: 13 LALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 +A + L T N++N +T G+ V F G Sbjct: 1 MANQIALQTTGHNIANVNTAGYSRQSVAFQTSPGQNMGSG 40 Score = 36.4 bits (82), Expect = 3.9, Method: Composition-based stats. Identities = 4/41 (9%), Positives = 15/41 (36%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E +++ Q + + ++ + ++ + Sbjct: 601 SGVNLDEEAAKLLQYQQSYQASAKMLQVAQSIFDSVLQTVG 641 >gi|114565761|ref|YP_752915.1| flagellar hook-associated protein-like protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114336696|gb|ABI67544.1| Flagellar hook-associated protein-like protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 838 Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 16/41 (39%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S + EM MI FN+ + I ++ + I + Sbjct: 794 SGVSLDEEMTNMIKFQHAFNAASRFITGIDEGLEVIINRMG 834 Score = 43.3 bits (100), Expect = 0.029, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 22/62 (35%), Gaps = 6/62 (9%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK------FSEVVGAIKNDIDQKIS 57 IG + L + L+ N++N +T GF F + N + Q + Sbjct: 6 GLEIGKRSVLMHQTALNITGHNIANANTPGFARQAPSIVTTSPFHAPMLNNANRVGQLGT 65 Query: 58 FV 59 V Sbjct: 66 GV 67 >gi|319787124|ref|YP_004146599.1| flagellar basal-body rod protein FlgB [Pseudoxanthomonas suwonensis 11-1] gi|317465636|gb|ADV27368.1| flagellar basal-body rod protein FlgB [Pseudoxanthomonas suwonensis 11-1] Length = 139 Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 1/63 (1%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVV-GAIKNDIDQKISFVASGKEYLSKEVGSFI 74 EQR+ +A N++N DT G++ + F+ + A ++ + + I Sbjct: 20 EQRMKLIASNLANADTPGYKAQDLDFNAALDAATRSRTGGVANGPGVPAATHESHLQDAI 79 Query: 75 STG 77 +TG Sbjct: 80 ATG 82 >gi|225552255|ref|ZP_03773195.1| flagellar basal-body rod protein FlgB [Borrelia sp. SV1] gi|225371253|gb|EEH00683.1| flagellar basal-body rod protein FlgB [Borrelia sp. SV1] Length = 135 Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 11/32 (34%), Positives = 17/32 (53%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 L R S ++DN++N DT F+ K+ F Sbjct: 15 LDVLSLRQSVISDNIANVDTPNFKRSKISFES 46 >gi|225552251|ref|ZP_03773191.1| flagellar hook-associated protein FlgK [Borrelia sp. SV1] gi|225371249|gb|EEH00679.1| flagellar hook-associated protein FlgK [Borrelia sp. SV1] Length = 627 Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 16/41 (39%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E+ MI Q F + + I + + + I + Sbjct: 586 SGVNKDEELANMIEFQQAFIAASKFITVSVELIDTVINKMG 626 Score = 36.4 bits (82), Expect = 3.5, Method: Composition-based stats. Identities = 11/57 (19%), Positives = 23/57 (40%), Gaps = 3/57 (5%) Query: 1 MQT---SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54 M + IG + A + ++TV N+SN G+ +V + +++ Sbjct: 1 MDSTFSGIEIGKRSLFAHKDAMNTVGHNLSNATKPGYSRQRVTMKTAIPLYAPQLNR 57 >gi|307720252|ref|YP_003891392.1| flagellar basal-body rod protein FlgB [Sulfurimonas autotrophica DSM 16294] gi|306978345|gb|ADN08380.1| flagellar basal-body rod protein FlgB [Sulfurimonas autotrophica DSM 16294] Length = 143 Score = 45.2 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 13/81 (16%), Positives = 28/81 (34%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTG 77 R ++ N++N DT ++ + F + + A KN++ Q + + S + Sbjct: 22 RQDMISSNIANADTPYYKPRDISFEDALIAKKNELYQDNAHQLKMAQTNSGHLQPKAQAS 81 Query: 78 TELDFALEGDAWFALESPRGI 98 D A + Sbjct: 82 QIKPTLYFRDGHMARNDGNSV 102 >gi|313624694|gb|EFR94651.1| flagellar basal-body rod protein FlgB [Listeria innocua FSL J1-023] Length = 133 Score = 45.2 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 18/44 (40%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK 55 L+ V++N++N +T F+ + F E GA Sbjct: 12 LNYLQTANQVVSNNIANANTPNFKASEASFEESFGASLRSSGSN 55 >gi|254458686|ref|ZP_05072110.1| flagellar basal-body rod protein FlgC [Campylobacterales bacterium GD 1] gi|207084452|gb|EDZ61740.1| flagellar basal-body rod protein FlgC [Campylobacterales bacterium GD 1] Length = 163 Score = 45.2 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 8/45 (17%), Positives = 20/45 (44%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 G++ N N + EM ++ T+ + + + ++ AI + Sbjct: 118 GYVAYPNINPVIEMADLVEATRSYQANVAAFESSKNMANSAISLL 162 Score = 41.0 bits (94), Expect = 0.14, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 6/49 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44 +SF+I A R++T++ N++N T G +R +V F + Sbjct: 4 LSSFDISGYGLSAQRVRVNTISQNIANAQTTRTEEGGPYRRKEVVFKAI 52 >gi|190574265|ref|YP_001972110.1| flagellar basal body rod protein FlgC [Stenotrophomonas maltophilia K279a] gi|190012187|emb|CAQ45810.1| putative flagellar basal-body rod protein FlgC [Stenotrophomonas maltophilia K279a] Length = 135 Score = 45.2 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 4/43 (9%), Positives = 20/43 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ + + + +M +I ++ + + ++ ++ L + Sbjct: 90 GYIYQPDVDPVAQMVNLISTSRNYQAGVEMLTTAKELALATLT 132 Score = 39.5 bits (90), Expect = 0.41, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 6/56 (10%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQ 54 F+I +A A R+ST+A N+SN DTV ++ ++ F V +I Sbjct: 7 FDIAGSALQAQSVRMSTIASNLSNADTVAGSADAVYKPLEPIFQAVTSKNDPNITS 62 >gi|254182895|ref|ZP_04889488.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei 1655] gi|184213429|gb|EDU10472.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei 1655] Length = 131 Score = 45.2 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 30/100 (30%), Gaps = 4/100 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + A + +A N++N DT G+R + F + D A Sbjct: 17 GLHPAALKLRAERTK--VIASNLANLDTPGYRARDLDFKRSLAEAGGDGAHARPGDALTG 74 Query: 64 EYLSKEVGSFI--STGTELDFALEGDAWFALESPRGIILT 101 + G ++ +E A+ + LT Sbjct: 75 GVTLGYRVPYQAAQDGNTVELGIEQAAFAQNAVDFQMSLT 114 >gi|229166585|ref|ZP_04294337.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH621] gi|228616839|gb|EEK73912.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH621] Length = 137 Score = 45.2 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 6/33 (18%), Positives = 14/33 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG 33 M + N + + + ++N+ N +T G Sbjct: 1 MFQAINASGSGLTTARKWMEVTSNNIVNVNTTG 33 Score = 43.7 bits (101), Expect = 0.021, Method: Composition-based stats. Identities = 7/40 (17%), Positives = 22/40 (55%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 G++ N + EM ++ + + + T++++ N+K + + Sbjct: 91 GYVRYPNIDVTAEMTNVMVAQKMYEANTSVLNANKKMLDK 130 >gi|303326604|ref|ZP_07357046.1| flagellar basal-body rod protein FlgC [Desulfovibrio sp. 3_1_syn3] gi|302862592|gb|EFL85524.1| flagellar basal-body rod protein FlgC [Desulfovibrio sp. 3_1_syn3] Length = 146 Score = 44.9 bits (104), Expect = 0.009, Method: Composition-based stats. Identities = 7/46 (15%), Positives = 21/46 (45%), Gaps = 1/46 (2%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G++ + N + EM ++ + + + T ++ + +A+ I Sbjct: 100 GYVSYPDINVVEEMANLMSAQRNYEANVTTVEAIKGMYNKAL-EIG 144 Score = 40.2 bits (92), Expect = 0.26, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 19/34 (55%), Gaps = 2/34 (5%) Query: 1 MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTV 32 M T+ +IG + A R++T++ N++N T Sbjct: 1 MDFLTALDIGASGLTADRTRINTISMNLANAKTT 34 >gi|217965192|ref|YP_002350870.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes HCC23] gi|217334462|gb|ACK40256.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes HCC23] gi|307570249|emb|CAR83428.1| flagellar basal-body rod protein [Listeria monocytogenes L99] Length = 133 Score = 44.9 bits (104), Expect = 0.009, Method: Composition-based stats. Identities = 10/45 (22%), Positives = 19/45 (42%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56 L+ V++N++N +T F+ + F E G+ Q Sbjct: 12 LNYLQTANQVVSNNIANANTPNFKASEASFEESFGSSLRASGQNS 56 >gi|254932010|ref|ZP_05265369.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes HPB2262] gi|290894007|ref|ZP_06556982.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes FSL J2-071] gi|290556453|gb|EFD89992.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes FSL J2-071] gi|293583562|gb|EFF95594.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes HPB2262] gi|332311134|gb|EGJ24229.1| Flagellar basal-body rod protein FlgB [Listeria monocytogenes str. Scott A] Length = 133 Score = 44.9 bits (104), Expect = 0.009, Method: Composition-based stats. Identities = 11/104 (10%), Positives = 28/104 (26%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 L+ V++N++N +T F+ + F E G+ Q A + + Sbjct: 12 LNYLQTANQVVSNNIANANTPNFKASEASFEESFGSSLRASGQNSIESAGNLTKTNTKHL 71 Query: 72 SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115 + + + + + + Sbjct: 72 AGTDIDETNAKVTTKSGSINEDGNNVNVTSEMISLTKNNQMYAL 115 >gi|118588701|ref|ZP_01546109.1| flagellar basal-body rod protein B [Stappia aggregata IAM 12614] gi|118438687|gb|EAV45320.1| flagellar basal-body rod protein B [Stappia aggregata IAM 12614] Length = 134 Score = 44.9 bits (104), Expect = 0.009, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 30/87 (34%), Gaps = 4/87 (4%) Query: 5 FNIGL-AAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDIDQKISFVA 60 L + + R S +A N++N DT G+ V F + +G ++ + Sbjct: 8 LFQALKSKMQWHQTRQSVLAQNIANADTPGYMARDVKEYSFKDHIGRQSLNLSTDTTASG 67 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGD 87 + L + I + G+ Sbjct: 68 HIRGSLGATDKAKIEEDDTFEVTPSGN 94 >gi|15887900|ref|NP_353581.1| flagellar basal body rod protein FlgC [Agrobacterium tumefaciens str. C58] gi|20141427|sp|Q44336|FLGC_AGRT5 RecName: Full=Flagellar basal-body rod protein flgC gi|15155492|gb|AAK86366.1| flagellar basal-body rod protein [Agrobacterium tumefaciens str. C58] Length = 139 Score = 44.9 bits (104), Expect = 0.009, Method: Composition-based stats. Identities = 9/68 (13%), Positives = 24/68 (35%) Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 G+ + + G ++ N N + EM M + +++ +I + + Sbjct: 70 GVDRGDFVHEYDPGNPAADTNGMVKMPNVNVLIEMADMREANRSYDANLQVIRQTRDLVA 129 Query: 236 EAIRNIAS 243 I + + Sbjct: 130 STIDLLKA 137 Score = 40.6 bits (93), Expect = 0.18, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 20/51 (39%), Gaps = 7/51 (13%) Query: 7 IGLAAQLALEQRLSTVADNMSNT----DTVG---FRTIKVKFSEVVGAIKN 50 I + RL V++N++N DT G +R V F + + Sbjct: 10 IAGSGLEVQSTRLRIVSENIANARSTGDTPGADPYRRKTVTFGSELDHVSG 60 >gi|260431757|ref|ZP_05785728.1| flagellar hook-associated protein FlgK [Silicibacter lacuscaerulensis ITI-1157] gi|260415585|gb|EEX08844.1| flagellar hook-associated protein FlgK [Silicibacter lacuscaerulensis ITI-1157] Length = 483 Score = 44.9 bits (104), Expect = 0.009, Method: Composition-based stats. Identities = 14/88 (15%), Positives = 31/88 (35%), Gaps = 3/88 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M T+ N L A + + V+ N++N T G+ + E+ + + ++ V Sbjct: 3 MSTALNNALGGLSAASRGAAVVSGNIANALTPGYAKRTL---ELATSQISGNGVQVVGVT 59 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDA 88 + + L+ A+ Sbjct: 60 RHHDPVLAANLRAADADLALNSAIADFH 87 Score = 37.5 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 11/84 (13%), Positives = 32/84 (38%), Gaps = 1/84 (1%) Query: 156 ATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIH 215 T L + ++S+ + + + +++ E +S E+ +M+ Sbjct: 400 GTGSLRAAELSEALLSKAGANAHTAQSRMTFAASLHQQMEQLVAEQG-VDSDAELQRMMQ 458 Query: 216 LTQKFNSITTLIDENEKSMLEAIR 239 + Q + + +I ++ M +R Sbjct: 459 IEQAYAANARIISVVDELMEMLLR 482 >gi|238916199|ref|YP_002929716.1| flagellar hook-associated protein 1 FlgK [Eubacterium eligens ATCC 27750] gi|238871559|gb|ACR71269.1| flagellar hook-associated protein 1 FlgK [Eubacterium eligens ATCC 27750] Length = 523 Score = 44.9 bits (104), Expect = 0.009, Method: Composition-based stats. Identities = 11/102 (10%), Positives = 28/102 (27%), Gaps = 4/102 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV----VGAIKNDIDQKISFV 59 I A + ++ + N++N +T G+ A + + Sbjct: 7 GLTIAYTGLQAAQTSINVTSHNLANINTKGYTRESASTKAADALRTYARYGTLGSGVVVD 66 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101 A + S + + T +++ + T Sbjct: 67 AINQTRDSYYDEKYRNNNTNYGQYNVKNSYMSQIENYLNEFT 108 >gi|291326355|ref|ZP_06124197.2| flagellar hook-associated protein FlgK [Providencia rettgeri DSM 1131] gi|291314693|gb|EFE55146.1| flagellar hook-associated protein FlgK [Providencia rettgeri DSM 1131] Length = 562 Score = 44.9 bits (104), Expect = 0.009, Method: Composition-based stats. Identities = 12/77 (15%), Positives = 26/77 (33%), Gaps = 2/77 (2%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFV 59 N L+ A + LS +++N++N + F E G + + F Sbjct: 18 NNVMNNALSGVNAAQGGLSVISNNLANAGVGYYHRQSAVFGENPGTMTPNGYFGNGTYFS 77 Query: 60 ASGKEYLSKEVGSFIST 76 +E+ + + Sbjct: 78 HVRREFDEFINAQYSQS 94 >gi|21231400|ref|NP_637317.1| flagellar basal body rod protein FlgB [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66768547|ref|YP_243309.1| flagellar basal body rod protein FlgB [Xanthomonas campestris pv. campestris str. 8004] gi|21113066|gb|AAM41241.1| flagellar protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66573879|gb|AAY49289.1| flagellar protein [Xanthomonas campestris pv. campestris str. 8004] Length = 133 Score = 44.9 bits (104), Expect = 0.009, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 25/55 (45%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65 A EQR+ +A N+SN DT G++ + F + A + D + K Y Sbjct: 15 ALTLREQRMKLIASNLSNVDTPGYKAKDLNFEAALKAAEGVRDGGLMQATDAKHY 69 >gi|46906961|ref|YP_013350.1| flagellar basal body rod protein FlgB [Listeria monocytogenes serotype 4b str. F2365] gi|47095276|ref|ZP_00232887.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes str. 1/2a F6854] gi|224498792|ref|ZP_03667141.1| flagellar basal body rod protein FlgB [Listeria monocytogenes Finland 1988] gi|254829367|ref|ZP_05234054.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes FSL N3-165] gi|254900054|ref|ZP_05259978.1| flagellar basal body rod protein FlgB [Listeria monocytogenes J0161] gi|254911393|ref|ZP_05261405.1| flagellar basal body rod protein FlgB [Listeria monocytogenes J2818] gi|254935720|ref|ZP_05267417.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes F6900] gi|254993618|ref|ZP_05275808.1| flagellar basal body rod protein FlgB [Listeria monocytogenes FSL J2-064] gi|255025678|ref|ZP_05297664.1| flagellar basal body rod protein FlgB [Listeria monocytogenes FSL J2-003] gi|46880227|gb|AAT03527.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes serotype 4b str. F2365] gi|47016347|gb|EAL07269.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes str. 1/2a F6854] gi|258601780|gb|EEW15105.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes FSL N3-165] gi|258608303|gb|EEW20911.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes F6900] gi|293589330|gb|EFF97664.1| flagellar basal body rod protein FlgB [Listeria monocytogenes J2818] Length = 133 Score = 44.9 bits (104), Expect = 0.009, Method: Composition-based stats. Identities = 11/104 (10%), Positives = 30/104 (28%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 L+ V++N++N +T F+ + F E +G+ Q + A + + Sbjct: 12 LNYLQTANQVVSNNIANANTPNFKASEASFEESLGSSLRASGQNSTESAGNLTKTNTKHL 71 Query: 72 SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115 + + + + + + Sbjct: 72 AGTDIDETNAKVTTKSGSINEDGNNVNVTSEMISLTKNNQMYAL 115 >gi|289666045|ref|ZP_06487626.1| flagellar basal body rod protein FlgC [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 135 Score = 44.9 bits (104), Expect = 0.009, Method: Composition-based stats. Identities = 5/43 (11%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ + + + +M MI ++ + + +++ ++ L + Sbjct: 90 GYVFSPDVDPVSQMVNMISASRNYQAGVEMLNTAKELALATLT 132 Score = 36.4 bits (82), Expect = 3.1, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 31/84 (36%), Gaps = 8/84 (9%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKISF 58 F++ +A A RLST+A N++N D+V ++ I+ F + D Sbjct: 7 FDVAGSALHAQSVRLSTIASNLANADSVAGSAEATYKPIEPIFQA--QQSRRDPSLTSVN 64 Query: 59 VASGKEYLSKEVGSFISTGTELDF 82 V + + + D Sbjct: 65 VKEITTTNAPPIRRYEPGHPLADA 88 >gi|296135676|ref|YP_003642918.1| flagellar basal-body rod protein FlgB [Thiomonas intermedia K12] gi|295795798|gb|ADG30588.1| flagellar basal-body rod protein FlgB [Thiomonas intermedia K12] Length = 135 Score = 44.9 bits (104), Expect = 0.009, Method: Composition-based stats. Identities = 11/74 (14%), Positives = 25/74 (33%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69 A QR ++ N++N +T G++ + + FS A + + + Sbjct: 14 TALNLRAQRQQLLSANIANANTPGYKAVDLDFSAAFKAALSGQQTGGLPLKTENARQLAG 73 Query: 70 VGSFISTGTELDFA 83 + + A Sbjct: 74 NVAPAGSNFIAYQA 87 >gi|209884536|ref|YP_002288393.1| flagellar basal-body rod protein FlgC [Oligotropha carboxidovorans OM5] gi|209872732|gb|ACI92528.1| flagellar basal-body rod protein FlgC [Oligotropha carboxidovorans OM5] Length = 141 Score = 44.9 bits (104), Expect = 0.009, Method: Composition-based stats. Identities = 9/58 (15%), Positives = 22/58 (37%) Query: 186 LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 E + G ++ N NS+ EM M + + + +I + + + + + Sbjct: 84 HEPGNPAADANGNVKYPNVNSLVEMTDMREAQRSYEANLNIISATRRMIQRTLDILKA 141 Score = 42.2 bits (97), Expect = 0.064, Method: Composition-based stats. Identities = 10/59 (16%), Positives = 22/59 (37%), Gaps = 9/59 (15%) Query: 1 MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKN 50 M S +I + A R+ +++N++N D+ +R F + + Sbjct: 5 MDFLKSMSIATSGLRAQAGRMRVISENIANADSTAGTAGGDPYRRKVPTFVSALDRSLD 63 >gi|149202211|ref|ZP_01879184.1| Flagellar proximal rod protein FlgB [Roseovarius sp. TM1035] gi|149144309|gb|EDM32340.1| Flagellar proximal rod protein FlgB [Roseovarius sp. TM1035] Length = 128 Score = 44.9 bits (104), Expect = 0.009, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 21/44 (47%) Query: 9 LAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 +A EQR + +A N++N T GF+ + F V+ A Sbjct: 13 ASALNLREQRGAMLASNIANAATPGFKARDMDFETVLNAETGGG 56 >gi|194365682|ref|YP_002028292.1| flagellar basal body rod protein FlgC [Stenotrophomonas maltophilia R551-3] gi|254521317|ref|ZP_05133372.1| flagellar basal-body rod protein FlgC [Stenotrophomonas sp. SKA14] gi|194348486|gb|ACF51609.1| flagellar basal-body rod protein FlgC [Stenotrophomonas maltophilia R551-3] gi|219718908|gb|EED37433.1| flagellar basal-body rod protein FlgC [Stenotrophomonas sp. SKA14] Length = 135 Score = 44.9 bits (104), Expect = 0.009, Method: Composition-based stats. Identities = 4/43 (9%), Positives = 20/43 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ + + + +M +I ++ + + ++ ++ L + Sbjct: 90 GYIYQPDVDPVAQMVNLISTSRNYQAGVEMLTTAKELALATLT 132 Score = 39.5 bits (90), Expect = 0.43, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 6/56 (10%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQ 54 F+I +A A R+ST+A N+SN DTV ++ ++ F V +I Sbjct: 7 FDIAGSALQAQSVRMSTIASNLSNADTVAGSADAVYKPLEPIFQAVTSKNDPNITS 62 >gi|289808979|ref|ZP_06539608.1| flagellar basal body rod protein FlgF [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 45 Score = 44.9 bits (104), Expect = 0.009, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 16/44 (36%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44 M + + A + + A N++N T GFR V Sbjct: 2 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV 45 >gi|16802752|ref|NP_464237.1| flagellar basal body rod protein FlgB [Listeria monocytogenes EGD-e] gi|224501985|ref|ZP_03670292.1| flagellar basal body rod protein FlgB [Listeria monocytogenes FSL R2-561] gi|254830299|ref|ZP_05234954.1| flagellar basal body rod protein FlgB [Listeria monocytogenes 10403S] gi|284801040|ref|YP_003412905.1| flagellar basal body rod protein FlgB [Listeria monocytogenes 08-5578] gi|284994182|ref|YP_003415950.1| flagellar basal body rod protein FlgB [Listeria monocytogenes 08-5923] gi|16410099|emb|CAC98788.1| lmo0710 [Listeria monocytogenes EGD-e] gi|284056602|gb|ADB67543.1| flagellar basal body rod protein FlgB [Listeria monocytogenes 08-5578] gi|284059649|gb|ADB70588.1| flagellar basal body rod protein FlgB [Listeria monocytogenes 08-5923] Length = 133 Score = 44.9 bits (104), Expect = 0.009, Method: Composition-based stats. Identities = 11/104 (10%), Positives = 30/104 (28%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 L+ V++N++N +T F+ + F E +G+ Q + A + + Sbjct: 12 LNYLQTANQVVSNNIANANTPNFKASEASFEESLGSSLRASGQNSAESAGNLTKTNTKHL 71 Query: 72 SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115 + + + + + + Sbjct: 72 AGTDIDETNAKVTTKSGSINEDGNNVNVTSEMISLTKNNQMYAL 115 >gi|327478815|gb|AEA82125.1| flagellar hook-associated protein FlgK [Pseudomonas stutzeri DSM 4166] Length = 459 Score = 44.9 bits (104), Expect = 0.009, Method: Composition-based stats. Identities = 13/89 (14%), Positives = 29/89 (32%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66 IG + A + L+ N++N +T GF + + V G I + + + Sbjct: 7 IGYSGVRASQIALTATGQNIANVNTPGFSRLAPEMHSVGGQTATSIGGGVQVSSIRRLSN 66 Query: 67 SKEVGSFISTGTELDFALEGDAWFALESP 95 + T+ ++ + Sbjct: 67 DFQNQQLWRASTDKNYYGTSQQYLTALEG 95 Score = 38.3 bits (87), Expect = 0.83, Method: Composition-based stats. Identities = 5/32 (15%), Positives = 11/32 (34%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 S N E ++ Q + + +I + Sbjct: 420 SAVNLDEEAVNLMAYEQAYQANMKVISTSNDL 451 >gi|291276682|ref|YP_003516454.1| putative flagellar hook-associated protein [Helicobacter mustelae 12198] gi|290963876|emb|CBG39712.1| putative flagellar hook-associated protein [Helicobacter mustelae 12198] Length = 606 Score = 44.9 bits (104), Expect = 0.009, Method: Composition-based stats. Identities = 6/38 (15%), Positives = 15/38 (39%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S + EM +I +++ +I +K + + Sbjct: 566 SQVSVDEEMVNLIKFQSGYSANAKVITAIDKMIDTLLS 603 Score = 36.0 bits (81), Expect = 5.3, Method: Composition-based stats. Identities = 5/27 (18%), Positives = 9/27 (33%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTD 30 S A + + +N+SN Sbjct: 7 SLGTSYTGLQANQLMVDVTGNNISNAS 33 >gi|221636059|ref|YP_002523935.1| flagellar basal-body rod protein FlgC [Thermomicrobium roseum DSM 5159] gi|221158060|gb|ACM07178.1| flagellar basal-body rod protein FlgC [Thermomicrobium roseum DSM 5159] Length = 151 Score = 44.9 bits (104), Expect = 0.009, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G + + + + EM ++ T+ + + T++D + + A+ Sbjct: 105 GIVRYPDIDVVSEMTNLMAATRAYEANVTVLDALKTMAMRALS 147 Score = 42.5 bits (98), Expect = 0.051, Method: Composition-based stats. Identities = 9/28 (32%), Positives = 14/28 (50%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTV 32 + L+A A R+ A N++N DT Sbjct: 7 MRVSLSALTAQRVRMDVTASNLANVDTT 34 >gi|118588734|ref|ZP_01546142.1| hypothetical protein SIAM614_18549 [Stappia aggregata IAM 12614] gi|118438720|gb|EAV45353.1| hypothetical protein SIAM614_18549 [Stappia aggregata IAM 12614] Length = 617 Score = 44.9 bits (104), Expect = 0.009, Method: Composition-based stats. Identities = 9/48 (18%), Positives = 20/48 (41%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50 ++ N + +++L A N++N DT G+ + + N Sbjct: 5 SALNTAVFGITYNQRQLDVTASNIANADTAGYSKKTISANVYFDGNGN 52 >gi|170741833|ref|YP_001770488.1| flagellar basal body rod protein FlgB [Methylobacterium sp. 4-46] gi|168196107|gb|ACA18054.1| flagellar basal body rod protein [Methylobacterium sp. 4-46] Length = 127 Score = 44.9 bits (104), Expect = 0.009, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 4/61 (6%) Query: 2 QTSFNI-GLAAQLAL--EQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIKNDIDQKIS 57 + + GLA++ A R +TVA N++N DT G++ V F+EV+ D+ Sbjct: 1 MSGIYLFGLASRRAQYLSVRQATVAGNIANADTPGYKARDVVPFAEVLSRAGLDLAATSQ 60 Query: 58 F 58 Sbjct: 61 G 61 >gi|212709498|ref|ZP_03317626.1| hypothetical protein PROVALCAL_00540 [Providencia alcalifaciens DSM 30120] gi|212687836|gb|EEB47364.1| hypothetical protein PROVALCAL_00540 [Providencia alcalifaciens DSM 30120] Length = 546 Score = 44.9 bits (104), Expect = 0.009, Method: Composition-based stats. Identities = 12/77 (15%), Positives = 26/77 (33%), Gaps = 2/77 (2%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFV 59 N L+ A + LS +++N++N + F E G + + F Sbjct: 3 NNVMNNALSGVNAAQGGLSVISNNLANAGVGYYHRQSAVFGENPGTMTPNGYFGNGTYFS 62 Query: 60 ASGKEYLSKEVGSFIST 76 +E+ + + Sbjct: 63 HVRREFDEFVNAQYSQS 79 >gi|163852027|ref|YP_001640070.1| flagellar basal body rod protein FlgC [Methylobacterium extorquens PA1] gi|218530781|ref|YP_002421597.1| flagellar basal body rod protein FlgC [Methylobacterium chloromethanicum CM4] gi|240139294|ref|YP_002963769.1| flagellar basal-body rod protein flgC [Methylobacterium extorquens AM1] gi|254561750|ref|YP_003068845.1| flagellar basal-body rod protein flgC [Methylobacterium extorquens DM4] gi|163663632|gb|ABY30999.1| flagellar basal-body rod protein FlgC [Methylobacterium extorquens PA1] gi|218523084|gb|ACK83669.1| flagellar basal-body rod protein FlgC [Methylobacterium chloromethanicum CM4] gi|240009266|gb|ACS40492.1| flagellar basal-body rod protein flgC [Methylobacterium extorquens AM1] gi|254269028|emb|CAX24989.1| flagellar basal-body rod protein flgC [Methylobacterium extorquens DM4] Length = 136 Score = 44.9 bits (104), Expect = 0.009, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 29/109 (26%), Gaps = 10/109 (9%) Query: 1 MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKN- 50 M S I + A R+ +A+N++N D+ +R F+ N Sbjct: 1 MDFLKSLGIAASGLKAQSGRMRIIAENIANADSTAQTAGGDPYRRKIPTFTSRFDNELNA 60 Query: 51 DIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 + + + +K + + L Sbjct: 61 SVVEAGRVRRDPTPFRTKHDPGNPAADARGEVRLPNVNGLIENMDMREA 109 Score = 37.5 bits (85), Expect = 1.8, Method: Composition-based stats. Identities = 12/124 (9%), Positives = 33/124 (26%) Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 I + G + K+ + +++ V P Sbjct: 13 GLKAQSGRMRIIAENIANADSTAQTAGGDPYRRKIPTFTSRFDNELNASVVEAGRVRRDP 72 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 T + + RG + N N + E M + + + ++ + + + Sbjct: 73 TPFRTKHDPGNPAADARGEVRLPNVNGLIENMDMREAQRSYEANLNMVTATRRMISRTLE 132 Query: 240 NIAS 243 + + Sbjct: 133 ILKA 136 >gi|225569938|ref|ZP_03778963.1| hypothetical protein CLOHYLEM_06033 [Clostridium hylemonae DSM 15053] gi|225161408|gb|EEG74027.1| hypothetical protein CLOHYLEM_06033 [Clostridium hylemonae DSM 15053] Length = 515 Score = 44.9 bits (104), Expect = 0.010, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 25/77 (32%), Gaps = 14/77 (18%) Query: 1 MQTSFNIGLA----AQLALEQRLSTVADNMSNTDTVGFRTIK----------VKFSEVVG 46 M S G A A ++ + N+SN +T G+ + FS V Sbjct: 1 MIRSTFAGFTMAQQALSANQRAIDVAGQNLSNINTPGYTRQRLDLASISPVGASFSSSVY 60 Query: 47 AIKNDIDQKISFVASGK 63 K + ++ + Sbjct: 61 DNKVGQGVMMKGISQIR 77 Score = 43.3 bits (100), Expect = 0.029, Method: Composition-based stats. Identities = 7/41 (17%), Positives = 19/41 (46%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E+ ++ Q +N+ + L+ ++ + + I + Sbjct: 471 SGVNMDEEVMDLMRYHQSYNAASRLMTTMDEMLDKLINDTG 511 >gi|238799422|ref|ZP_04642851.1| hypothetical protein ymoll0001_16400 [Yersinia mollaretii ATCC 43969] gi|238716726|gb|EEQ08613.1| hypothetical protein ymoll0001_16400 [Yersinia mollaretii ATCC 43969] Length = 549 Score = 44.9 bits (104), Expect = 0.010, Method: Composition-based stats. Identities = 10/39 (25%), Positives = 20/39 (51%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 N ++ A + LSTV++N++N G+ F++ Sbjct: 1 MNTAMSGLSAAQYALSTVSNNITNFQVAGYNRQNAIFAQ 39 >gi|222823431|ref|YP_002575005.1| flagellar hook-associated protein FlgK [Campylobacter lari RM2100] gi|222538653|gb|ACM63754.1| flagellar hook-associated protein FlgK [Campylobacter lari RM2100] Length = 609 Score = 44.9 bits (104), Expect = 0.010, Method: Composition-based stats. Identities = 12/78 (15%), Positives = 27/78 (34%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 S G++ A E +++T +N+SN + V + + S + + + Sbjct: 6 SLYTGVSGIKAAEIQINTTGNNISNANAVFYTRQRAVQSSGMSIDRGGLHLGTGTQIDTI 65 Query: 64 EYLSKEVGSFISTGTELD 81 + L E + Sbjct: 66 KRLHDEHSYYELKNATTQ 83 Score = 40.2 bits (92), Expect = 0.24, Method: Composition-based stats. Identities = 23/197 (11%), Positives = 58/197 (29%), Gaps = 12/197 (6%) Query: 42 SEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101 ++ A + Q S SF GT AL ++F + I + Sbjct: 421 NDYFKAFYHYDGQSDSGNFQINGLKKGYKISFKDKGTNFPGALNVSSFFNGQDASSINV- 479 Query: 102 RDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLY 161 + + + S++G D+A+ +Q+ + F + S Sbjct: 480 -NSSIRNDPNTLKASSNGVDGNNDIANAMLQLQNQKVNFYNKDGTVDSLTLDGYYRKFTG 538 Query: 162 SVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFN 221 + + + + N+ + S N+ E+ +I + Sbjct: 539 KIASNA---ESNSFAHATNMTVFNTAYAEYQS-------KSGVNTNEELAALIQYQASYG 588 Query: 222 SITTLIDENEKSMLEAI 238 + ++ ++ + + Sbjct: 589 AAAKIVTTVDQMIETLL 605 >gi|90422608|ref|YP_530978.1| flagellar basal body rod protein FlgC [Rhodopseudomonas palustris BisB18] gi|90104622|gb|ABD86659.1| flagellar basal-body rod protein FlgC [Rhodopseudomonas palustris BisB18] Length = 139 Score = 44.9 bits (104), Expect = 0.010, Method: Composition-based stats. Identities = 12/100 (12%), Positives = 30/100 (30%) Query: 143 GEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDS 202 G + K V+ ++ G+ + + G+++ Sbjct: 38 RSPGAEPYQRKTTTFTAEMDRAAGVPVVKVKDIGVDRAPFRLDYQPGHPAADQSGYVKLP 97 Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 N N + EM M + + + +I + + I + Sbjct: 98 NVNMLIEMADMRETNRTYEANLQVIKQTRSMVSMTIDLLR 137 Score = 43.3 bits (100), Expect = 0.028, Method: Composition-based stats. Identities = 13/103 (12%), Positives = 29/103 (28%), Gaps = 8/103 (7%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKF-SEVVGAIKNDIDQK 55 S I + A RL V++N++N ++ G ++ F +E+ A + + Sbjct: 8 SVQIASSGLEAQSTRLRVVSENLANANSTGRSPGAEPYQRKTTTFTAEMDRAAGVPVVKV 67 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98 + + L + Sbjct: 68 KDIGVDRAPFRLDYQPGHPAADQSGYVKLPNVNMLIEMADMRE 110 >gi|261344136|ref|ZP_05971780.1| flagellar hook-associated protein FlgK [Providencia rustigianii DSM 4541] gi|282567728|gb|EFB73263.1| flagellar hook-associated protein FlgK [Providencia rustigianii DSM 4541] Length = 547 Score = 44.9 bits (104), Expect = 0.010, Method: Composition-based stats. Identities = 12/77 (15%), Positives = 26/77 (33%), Gaps = 2/77 (2%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFV 59 N L+ A + LS +++N++N + F E G + + F Sbjct: 3 NNVMNNALSGVNAAQGGLSVISNNLANAGVGYYHRQSAVFGENPGTMTPNGYFGNGTYFS 62 Query: 60 ASGKEYLSKEVGSFIST 76 +E+ + + Sbjct: 63 HVRREFDEFVNAQYSQS 79 >gi|238799104|ref|ZP_04642560.1| Flagellar basal-body rod protein flgB [Yersinia mollaretii ATCC 43969] gi|238717051|gb|EEQ08911.1| Flagellar basal-body rod protein flgB [Yersinia mollaretii ATCC 43969] Length = 137 Score = 44.9 bits (104), Expect = 0.010, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 24/65 (36%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR ++ N++N DT GF+ + FS + + + V+ Sbjct: 15 ALNLRAQRQEILSSNIANADTPGFQARDIDFSSQLQKVMEQGRASGTGVSLSLTSARHIP 74 Query: 71 GSFIS 75 S + Sbjct: 75 ASTVQ 79 >gi|47091673|ref|ZP_00229469.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes str. 4b H7858] gi|226223341|ref|YP_002757448.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes Clip81459] gi|254824010|ref|ZP_05229011.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes FSL J1-194] gi|47019992|gb|EAL10729.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes str. 4b H7858] gi|225875803|emb|CAS04506.1| Putative flagellar basal-body rod protein FlgB [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|293593238|gb|EFG00999.1| flagellar basal-body rod protein FlgB [Listeria monocytogenes FSL J1-194] gi|328467275|gb|EGF38355.1| flagellar basal body rod protein FlgB [Listeria monocytogenes 1816] Length = 133 Score = 44.9 bits (104), Expect = 0.010, Method: Composition-based stats. Identities = 11/104 (10%), Positives = 29/104 (27%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 L+ V++N++N +T F+ + F E G+ Q + A + + Sbjct: 12 LNYLQTANQVVSNNIANANTPNFKASEASFEESFGSSLRASGQNSTESAGNLTKTNTKHL 71 Query: 72 SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115 + + + + + + Sbjct: 72 AGTDIDETNAKVTTKSGSINEDGNNVNVTSEMISLTKNNQMYAL 115 >gi|307823537|ref|ZP_07653766.1| flagellar hook-associated protein FlgK [Methylobacter tundripaludum SV96] gi|307735522|gb|EFO06370.1| flagellar hook-associated protein FlgK [Methylobacter tundripaludum SV96] Length = 612 Score = 44.9 bits (104), Expect = 0.010, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 20/52 (38%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M L+ L ++ L T +N+SN T G+ +V+ D Sbjct: 1 MSGLLATSLSGLLVAQRSLETTQNNISNIHTEGYSRQRVEQGTKPAQFTGDG 52 >gi|303248348|ref|ZP_07334609.1| flagellar basal-body rod protein FlgC [Desulfovibrio fructosovorans JJ] gi|302490256|gb|EFL50170.1| flagellar basal-body rod protein FlgC [Desulfovibrio fructosovorans JJ] Length = 146 Score = 44.9 bits (104), Expect = 0.010, Method: Composition-based stats. Identities = 12/71 (16%), Positives = 25/71 (35%), Gaps = 6/71 (8%) Query: 168 GFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 G V P P + G++ + N + EM MI + + + ++ I Sbjct: 78 GLVNDNRPFRMQYEPGHPDANAE------GYVAYPDINVVEEMANMITAMRSYEASSSSI 131 Query: 228 DENEKSMLEAI 238 + +A+ Sbjct: 132 GTVKTMFSKAL 142 Score = 38.3 bits (87), Expect = 0.91, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 18/34 (52%), Gaps = 2/34 (5%) Query: 1 MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTV 32 M T+ +IG + A ++T++ N++N T Sbjct: 1 MDLFTAMDIGSSGMSAQRTLMNTISMNLANIRTT 34 >gi|268680293|ref|YP_003304724.1| flagellar basal-body rod protein FlgB [Sulfurospirillum deleyianum DSM 6946] gi|268618324|gb|ACZ12689.1| flagellar basal-body rod protein FlgB [Sulfurospirillum deleyianum DSM 6946] Length = 144 Score = 44.9 bits (104), Expect = 0.010, Method: Composition-based stats. Identities = 11/55 (20%), Positives = 23/55 (41%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 A A R ++ N++N DT ++ + F + K +I + S + + Sbjct: 14 AGLNARAMRQDLISSNIANIDTPFYKARDIDFESALIEKKREIYGQNSTADTLEM 68 >gi|125974729|ref|YP_001038639.1| flagellar hook-associated protein FlgK [Clostridium thermocellum ATCC 27405] gi|125714954|gb|ABN53446.1| flagellar hook-associated protein FlgK [Clostridium thermocellum ATCC 27405] Length = 489 Score = 44.9 bits (104), Expect = 0.010, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 16/43 (37%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46 I + E+ LS N++N +T G+ + + Sbjct: 5 GLEIARSGMYVNERALSVTGHNVANVNTKGYARQQAMITTAPY 47 Score = 39.5 bits (90), Expect = 0.37, Method: Composition-based stats. Identities = 5/39 (12%), Positives = 15/39 (38%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 + EM M+ +++ + I+ + + I + Sbjct: 447 VSMDEEMSNMMRYKFAYSASSRAINVIDDMLETIITRMG 485 >gi|325918874|ref|ZP_08180951.1| flagellar basal-body rod protein FlgB [Xanthomonas vesicatoria ATCC 35937] gi|325534911|gb|EGD06830.1| flagellar basal-body rod protein FlgB [Xanthomonas vesicatoria ATCC 35937] Length = 133 Score = 44.9 bits (104), Expect = 0.010, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 25/55 (45%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65 A EQR+ +A N+SN DT G++ + F + + + D + K Y Sbjct: 15 ALSLREQRMKLIASNLSNVDTPGYKAKDLNFEAALKSAQGMQDGGLMQATDAKHY 69 >gi|119952979|ref|YP_945188.1| flagellar hook-associated protein FlgK [Borrelia turicatae 91E135] gi|119861750|gb|AAX17518.1| flagellar hook-associated protein 1 [Borrelia turicatae 91E135] Length = 627 Score = 44.9 bits (104), Expect = 0.010, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 16/41 (39%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E+ MI Q F + + I + + + I + Sbjct: 586 SGVNKDEELANMIEFQQSFIAASKFITVSAELIDTIINKMG 626 >gi|289670504|ref|ZP_06491579.1| flagellar basal body rod protein FlgC [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 135 Score = 44.9 bits (104), Expect = 0.010, Method: Composition-based stats. Identities = 5/43 (11%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ + + + +M MI ++ + + +++ ++ L + Sbjct: 90 GYVFSPDVDPVSQMVNMISTSRNYQAGVEMLNTAKELALATLT 132 Score = 35.6 bits (80), Expect = 6.4, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 31/84 (36%), Gaps = 8/84 (9%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKISF 58 F++ +A A RLST+A N++N D+V ++ I+ F + D Sbjct: 7 FDVAGSALHAHSVRLSTIASNLANADSVAGSAEATYKPIEPIFQA--QQSRRDPSLTSVN 64 Query: 59 VASGKEYLSKEVGSFISTGTELDF 82 V + + + D Sbjct: 65 VKEITTTNAPPIRRYEPGHPLADA 88 >gi|172057891|ref|YP_001814351.1| flagellar basal-body rod protein FlgB [Exiguobacterium sibiricum 255-15] gi|171990412|gb|ACB61334.1| flagellar basal-body rod protein FlgB [Exiguobacterium sibiricum 255-15] Length = 120 Score = 44.9 bits (104), Expect = 0.010, Method: Composition-based stats. Identities = 9/28 (32%), Positives = 18/28 (64%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVV 45 ++ N++N DT G++ +V FS+V+ Sbjct: 21 AQKVISTNIANVDTPGYKAKRVVFSDVL 48 >gi|306820110|ref|ZP_07453758.1| flagellar basal-body rod protein FlgB [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551888|gb|EFM39831.1| flagellar basal-body rod protein FlgB [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 133 Score = 44.9 bits (104), Expect = 0.010, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 21/41 (51%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50 A A R +++ N++N +T ++ V+F E + A + Sbjct: 13 TALDAYSMRNESISSNLANVNTPNYKRKYVRFEEYLTASYD 53 >gi|238764397|ref|ZP_04625347.1| hypothetical protein ykris0001_37640 [Yersinia kristensenii ATCC 33638] gi|238697423|gb|EEP90190.1| hypothetical protein ykris0001_37640 [Yersinia kristensenii ATCC 33638] Length = 338 Score = 44.9 bits (104), Expect = 0.010, Method: Composition-based stats. Identities = 11/39 (28%), Positives = 20/39 (51%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 N ++ A + LSTV++N+SN G+ F++ Sbjct: 1 MNTAMSGLSAAQYALSTVSNNISNFQVAGYNRQNTVFAQ 39 >gi|325918875|ref|ZP_08180952.1| flagellar basal-body rod protein FlgC [Xanthomonas vesicatoria ATCC 35937] gi|325534912|gb|EGD06831.1| flagellar basal-body rod protein FlgC [Xanthomonas vesicatoria ATCC 35937] Length = 135 Score = 44.9 bits (104), Expect = 0.010, Method: Composition-based stats. Identities = 5/43 (11%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ + + + +M MI ++ + + +++ ++ L + Sbjct: 90 GYVFSPDVDPVSQMVNMISASRNYQAGVEMLNTAKELALATLT 132 Score = 36.0 bits (81), Expect = 5.1, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 31/84 (36%), Gaps = 8/84 (9%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKISF 58 F++ +A A RLST+A N++N D+V ++ I+ F + D Sbjct: 7 FDVAGSALHAQSVRLSTIASNLANADSVAGSVEATYKPIEPIFQA--QQSRQDPSLTSVN 64 Query: 59 VASGKEYLSKEVGSFISTGTELDF 82 V + + + D Sbjct: 65 VKEITTTNAPPIRRYEPGHPLADA 88 >gi|299131775|ref|ZP_07024970.1| flagellar basal-body rod protein FlgC [Afipia sp. 1NLS2] gi|298591912|gb|EFI52112.1| flagellar basal-body rod protein FlgC [Afipia sp. 1NLS2] Length = 141 Score = 44.9 bits (104), Expect = 0.010, Method: Composition-based stats. Identities = 9/58 (15%), Positives = 22/58 (37%) Query: 186 LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 E + G ++ N NS+ EM M + + + +I + + + + + Sbjct: 84 HEPGNPAADANGNVKYPNVNSLVEMTDMREAQRSYEANLNIISATRRMIQRTLDILKA 141 Score = 43.7 bits (101), Expect = 0.024, Method: Composition-based stats. Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 9/59 (15%) Query: 1 MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKN 50 M S +I + A R+ +++N++N D+ +R FS + + Sbjct: 5 MDFLKSMSIATSGLRAQAGRMRVISENIANADSTASTAGGDPYRRKVPTFSSTLDRTLD 63 >gi|119469956|ref|ZP_01612761.1| putative flagellar hook-associated protein [Alteromonadales bacterium TW-7] gi|119446666|gb|EAW27939.1| putative flagellar hook-associated protein [Alteromonadales bacterium TW-7] Length = 667 Score = 44.9 bits (104), Expect = 0.010, Method: Composition-based stats. Identities = 10/54 (18%), Positives = 22/54 (40%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56 NI + A + L T + N++N +T G+ + + + +V + Sbjct: 4 NLLNIASSGVRANSELLQTTSKNIANVNTEGYVRERTEHTTMVDNQVGKGETYR 57 >gi|77463654|ref|YP_353158.1| flagellar basal-body rod protein FlgC [Rhodobacter sphaeroides 2.4.1] gi|77388072|gb|ABA79257.1| flagellar basal-body rod protein FlgC [Rhodobacter sphaeroides 2.4.1] Length = 138 Score = 44.9 bits (104), Expect = 0.010, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 30/87 (34%), Gaps = 6/87 (6%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDT------VGFRTIKVKFSEVVGAIKNDIDQK 55 + F++G A A R++TVA N++N T FR ++ F Sbjct: 5 DSVFDVGARALSAQMVRMNTVASNLANAGTVSDKAETAFRPLRPVFETSYADAVGRTGLS 64 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDF 82 + VA + + + D Sbjct: 65 TTDVAGVVSLDREPARVYRPDHPQADP 91 Score = 35.2 bits (79), Expect = 7.0, Method: Composition-based stats. Identities = 4/36 (11%), Positives = 13/36 (36%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + EM +M+ ++++ + + M Sbjct: 100 VSVDEEMVEMMEASRQYQNTLEAVSTLRSLMARTAS 135 >gi|261821159|ref|YP_003259265.1| flagellar hook-associated protein FlgK [Pectobacterium wasabiae WPP163] gi|261605172|gb|ACX87658.1| flagellar hook-associated protein FlgK [Pectobacterium wasabiae WPP163] Length = 556 Score = 44.9 bits (104), Expect = 0.010, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 31/82 (37%), Gaps = 2/82 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA--IKNDIDQKISF 58 M N ++ + LSTV++N+SN +G+ + + + I ++ Sbjct: 1 MSNLINTAMSGLKGAQVALSTVSNNISNQAVIGYSRQNTIIEQAISSSTSAGYIGNGVNV 60 Query: 59 VASGKEYLSKEVGSFISTGTEL 80 V+ ++Y S T Sbjct: 61 VSVDRQYNEFISNQLRSAQTTS 82 >gi|126444366|ref|YP_001061244.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei 668] gi|134280640|ref|ZP_01767350.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei 305] gi|254299688|ref|ZP_04967137.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei 406e] gi|125657216|gb|ABN48704.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei] gi|126223857|gb|ABN87362.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei 668] gi|134247662|gb|EBA47746.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei 305] gi|157809503|gb|EDO86673.1| flagellar basal-body rod protein FlgC [Burkholderia pseudomallei 406e] Length = 138 Score = 44.9 bits (104), Expect = 0.010, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 19/42 (45%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G + N N + EM M+ ++ +++ ++ LE + Sbjct: 93 GNVLYPNVNPVEEMTDMLSASRAYSTNVEVLGRVNGMQLELL 134 Score = 41.4 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 19/99 (19%), Positives = 37/99 (37%), Gaps = 7/99 (7%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKISFVA 60 I +A A RL+T+A N++N D+ +R K F+ + + + Sbjct: 9 IAGSAMSAQTVRLNTIASNLANADSASGTEDATYRARKPVFASIFQLDAQGEPRGAAVQV 68 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 ++ + G L A EG+ + +P + Sbjct: 69 LDVVKSTEPLRKVHQPGHPLADA-EGNVLYPNVNPVEEM 106 >gi|124516723|gb|EAY58231.1| Flagellar hook-associated protein FlgK [Leptospirillum rubarum] Length = 561 Score = 44.9 bits (104), Expect = 0.010, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 1/57 (1%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 NIG + A E LST N+SN +T G+ V+F + + V + Sbjct: 8 LNIGKSGIEANEAGLSTAGQNISNVNTPGYTVENVQF-DQSQPNHGSPGMVGNGVRA 63 >gi|114569242|ref|YP_755922.1| flagellar hook-associated protein FlgK [Maricaulis maris MCS10] gi|114339704|gb|ABI64984.1| flagellar hook-associated protein FlgK [Maricaulis maris MCS10] Length = 713 Score = 44.9 bits (104), Expect = 0.010, Method: Composition-based stats. Identities = 7/36 (19%), Positives = 15/36 (41%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 L+ A + L ++N++N +T G+ Sbjct: 7 LGNALSGLQASQAGLRASSNNVANVNTPGYARTIAS 42 >gi|269796401|ref|YP_003315856.1| flagellar basal-body rod protein FlgB [Sanguibacter keddieii DSM 10542] gi|269098586|gb|ACZ23022.1| flagellar basal-body rod protein FlgB [Sanguibacter keddieii DSM 10542] Length = 113 Score = 44.9 bits (104), Expect = 0.010, Method: Composition-based stats. Identities = 12/80 (15%), Positives = 32/80 (40%), Gaps = 1/80 (1%) Query: 2 QTSFNIGL-AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 + + L +A L R +A+N++N +T + +V F + + ++ Sbjct: 3 DSVTFVALNSALDGLALRQRVIANNVANINTPNYLAGRVSFESELASAVRRGTGAVTATQ 62 Query: 61 SGKEYLSKEVGSFISTGTEL 80 + ++ G+ ++ E Sbjct: 63 ARSLEPTRLDGNNVNLDAET 82 >gi|254973909|ref|ZP_05270381.1| flagellar basal-body rod protein [Clostridium difficile QCD-66c26] gi|255091295|ref|ZP_05320773.1| flagellar basal-body rod protein [Clostridium difficile CIP 107932] gi|255312953|ref|ZP_05354536.1| flagellar basal-body rod protein [Clostridium difficile QCD-76w55] gi|255515712|ref|ZP_05383388.1| flagellar basal-body rod protein [Clostridium difficile QCD-97b34] gi|255648806|ref|ZP_05395708.1| flagellar basal-body rod protein [Clostridium difficile QCD-37x79] gi|260682025|ref|YP_003213310.1| flagellar basal-body rod protein [Clostridium difficile CD196] gi|260685623|ref|YP_003216756.1| flagellar basal-body rod protein [Clostridium difficile R20291] gi|306518921|ref|ZP_07405268.1| flagellar basal-body rod protein [Clostridium difficile QCD-32g58] gi|260208188|emb|CBA60522.1| flagellar basal-body rod protein [Clostridium difficile CD196] gi|260211639|emb|CBE01890.1| flagellar basal-body rod protein [Clostridium difficile R20291] Length = 105 Score = 44.9 bits (104), Expect = 0.010, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 31/93 (33%), Gaps = 2/93 (2%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A R T+A+N++N +T G++ V F E + I++K + + Sbjct: 10 GLDATNLRSQTIANNIANINTEGYKRHYVTFEETLNDAMPKIEEKTDNSKGLRVDGNNVD 69 Query: 71 GSFISTGTELDFALEGDAWFALESPRGIILTRD 103 A + I +T+ Sbjct: 70 IEEEKVNQA--MATLQYNALISFANGKIAMTKS 100 >gi|261409644|ref|YP_003245885.1| flagellar hook-associated protein FlgK [Paenibacillus sp. Y412MC10] gi|261286107|gb|ACX68078.1| flagellar hook-associated protein FlgK [Paenibacillus sp. Y412MC10] Length = 520 Score = 44.9 bits (104), Expect = 0.010, Method: Composition-based stats. Identities = 6/41 (14%), Positives = 19/41 (46%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S + EM +I L + + + + ++++ + I ++ Sbjct: 476 SGVSLDEEMSNLIKLQHSYGAASRFMTTVDQNLDKIINSMG 516 Score = 41.0 bits (94), Expect = 0.15, Method: Composition-based stats. Identities = 7/36 (19%), Positives = 13/36 (36%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39 + A ++T N++N T G+ V Sbjct: 7 GIETAKRSLFAQMAGMNTTGHNIANASTPGYSRQVV 42 >gi|187918055|ref|YP_001883618.1| flagellar hook-associated protein FlgK [Borrelia hermsii DAH] gi|119860903|gb|AAX16698.1| flagellar hook-associated protein 1 [Borrelia hermsii DAH] Length = 627 Score = 44.9 bits (104), Expect = 0.010, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 16/41 (39%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E+ MI Q F + + I + + + I + Sbjct: 586 SGVNKDEELANMIEFQQSFIAASKFITVSAELIDTIINKMG 626 Score = 34.8 bits (78), Expect = 9.1, Method: Composition-based stats. Identities = 13/92 (14%), Positives = 30/92 (32%), Gaps = 5/92 (5%) Query: 1 MQT---SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS 57 M + IG + A + ++T+ N++NT G+ +V + +++ Sbjct: 1 MDSTFSGIEIGKKSLFAHKDAMNTIGHNLTNTSKPGYSRQRVIMKTEMPIYAPQLNRANK 60 Query: 58 FVASGKEYLSKEVGSFISTGTELDFALEGDAW 89 A LD + ++ Sbjct: 61 --AGQLGQGMMVQSIERIRDDLLDIRIAEESH 90 >gi|320353947|ref|YP_004195286.1| flagellar hook-associated protein FlgK [Desulfobulbus propionicus DSM 2032] gi|320122449|gb|ADW17995.1| flagellar hook-associated protein FlgK [Desulfobulbus propionicus DSM 2032] Length = 465 Score = 44.9 bits (104), Expect = 0.010, Method: Composition-based stats. Identities = 13/87 (14%), Positives = 26/87 (29%), Gaps = 3/87 (3%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 TS G + + + +N++N T G+ V + S Sbjct: 5 ITSLYTGASGIFTSQTAIQVTGNNITNAATEGYSRQTAH---VTSSTPLTQGGLTYGTGS 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDA 88 + + + +FI+ A G Sbjct: 62 AVDAIDRANDAFITRQLMAQSATYGQY 88 Score = 36.0 bits (81), Expect = 4.9, Method: Composition-based stats. Identities = 6/38 (15%), Positives = 16/38 (42%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S ++ EM +I + + + I ++ + +R Sbjct: 427 SGVSTDEEMVLLIQYQAGYEAASNYISVVKEMLDTLLR 464 >gi|220905263|ref|YP_002480575.1| flagellar hook-associated protein FlgK [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869562|gb|ACL49897.1| flagellar hook-associated protein FlgK [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 715 Score = 44.9 bits (104), Expect = 0.010, Method: Composition-based stats. Identities = 6/35 (17%), Positives = 13/35 (37%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 N EM +I + + LI ++ + + Sbjct: 677 VNLDEEMSNLIKFQHSYTAAAKLITTADQMLQTLL 711 Score = 42.9 bits (99), Expect = 0.034, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 23/82 (28%), Gaps = 1/82 (1%) Query: 1 MQTSF-NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFV 59 M NIG A A + +S N++N DT G+ V + + + Sbjct: 1 MLNGLLNIGKTALGASQAWISVTGSNIANADTEGYSRRYVDQRDAGTITAKPGGESLGVN 60 Query: 60 ASGKEYLSKEVGSFISTGTELD 81 A + Sbjct: 61 AQQIMRFFDAFLERSYVRQSTN 82 >gi|188583283|ref|YP_001926728.1| hypothetical protein Mpop_4075 [Methylobacterium populi BJ001] gi|179346781|gb|ACB82193.1| protein of unknown function DUF1078 domain protein [Methylobacterium populi BJ001] Length = 113 Score = 44.9 bits (104), Expect = 0.010, Method: Composition-based stats. Identities = 7/47 (14%), Positives = 17/47 (36%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G L+ N EM ++ + + + I + + + + S Sbjct: 67 GNLKLPNVRPTVEMSELRSAMRAYEANLRTIATFDDLKGKTLALLKS 113 >gi|34497157|ref|NP_901372.1| flagellar basal-body rod protein flgC [Chromobacterium violaceum ATCC 12472] gi|34103014|gb|AAQ59377.1| flagellar basal-body rod protein flgC [Chromobacterium violaceum ATCC 12472] Length = 134 Score = 44.9 bits (104), Expect = 0.010, Method: Composition-based stats. Identities = 8/37 (21%), Positives = 19/37 (51%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 SN N++ EM M+ T+ F + ++ + + + + Sbjct: 92 SNVNAVEEMTDMLSATRAFQTNVEVLAKVKTMQQDLL 128 Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 38/126 (30%), Gaps = 8/126 (6%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKISFVA 60 I +A A RL+TVA N++N DT +R K FS + + Q + V Sbjct: 9 IAGSAMTAQTVRLNTVASNIANADTASGAEQSAYRGRKPVFSSQMQGEGMGV-QVLDVVQ 67 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + + + + + TR + V + + Sbjct: 68 NQEPVRKAHEPGNPLADADGNVFYSNVNAVEEMTDMLSA-TRAFQTNVEVLAKVKTMQQD 126 Query: 121 YPVLDM 126 L Sbjct: 127 LLKLGD 132 >gi|238916743|ref|YP_002930260.1| flagellar basal-body rod protein FlgB [Eubacterium eligens ATCC 27750] gi|238872103|gb|ACR71813.1| flagellar basal-body rod protein FlgB [Eubacterium eligens ATCC 27750] Length = 130 Score = 44.9 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 11/61 (18%), Positives = 24/61 (39%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69 +A A R + +N++N DT ++ V+FS + + S + ++ Sbjct: 14 SAADASWTREEVLTNNIANVDTPNYKRQDVEFSSFLANALQRSGKSTSSLTQRVNNVNYN 73 Query: 70 V 70 Sbjct: 74 D 74 >gi|23009956|ref|ZP_00050814.1| COG1558: Flagellar basal body rod protein [Magnetospirillum magnetotacticum MS-1] Length = 136 Score = 44.9 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 12/106 (11%), Positives = 28/106 (26%), Gaps = 8/106 (7%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKND-ID 53 S I + A R+ +A+N++N D+ +R F+ + + Sbjct: 4 MKSLGIAASGLKAQSGRMRIIAENIANADSTAKTAGGEPYRRKVPTFASRFDRELDAKVI 63 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 + + +K + + L Sbjct: 64 EAGRIARDPSPFRTKYDPGNPAADARGEVRLPNVNGLIENMDMREA 109 Score = 37.2 bits (84), Expect = 2.2, Method: Composition-based stats. Identities = 5/47 (10%), Positives = 17/47 (36%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G + N N + E M + + + ++ + + + + + Sbjct: 90 GEVRLPNVNGLIENMDMREAQRSYEANLNMVTATRRMISRTLDILKA 136 >gi|330889076|gb|EGH21737.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv. mori str. 301020] Length = 546 Score = 44.9 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 35/97 (36%), Gaps = 1/97 (1%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + +IGL+ A ++T+ +N +N DT G+ +V + I + + Sbjct: 1 MSLISIGLSGINASSAAINTIGNNTANVDTAGYSRQQVM-TTASAQINIGLGVGYIGTGT 59 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98 + + S++ + AL DA Sbjct: 60 TLSDVRRIYNSYLDAQLQTSTALSADAVAYSGQASKT 96 >gi|298345987|ref|YP_003718674.1| flagellar basal body rod protein [Mobiluncus curtisii ATCC 43063] gi|304390255|ref|ZP_07372209.1| flagellar basal-body rod protein FlgB [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315654574|ref|ZP_07907480.1| flagella basal body rod protein [Mobiluncus curtisii ATCC 51333] gi|315657520|ref|ZP_07910402.1| flagella basal body rod protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|298236048|gb|ADI67180.1| flagellar basal body rod protein [Mobiluncus curtisii ATCC 43063] gi|304326737|gb|EFL93981.1| flagellar basal-body rod protein FlgB [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315491038|gb|EFU80657.1| flagella basal body rod protein [Mobiluncus curtisii ATCC 51333] gi|315491992|gb|EFU81601.1| flagella basal body rod protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 115 Score = 44.9 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 32/77 (41%), Gaps = 2/77 (2%) Query: 6 NIGL-AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS-EVVGAIKNDIDQKISFVASGK 63 + + A L R +ADN++N T GF KV F E+ A++ + Sbjct: 7 YVAMRTALDGLSMRQRVIADNIANIQTPGFLAGKVSFENELARAVQFGHPATTHIATARS 66 Query: 64 EYLSKEVGSFISTGTEL 80 ++ G+ ++ TE Sbjct: 67 LEPTRIDGNNVNLDTET 83 >gi|21242729|ref|NP_642311.1| flagellar basal body rod protein FlgC [Xanthomonas axonopodis pv. citri str. 306] gi|294625272|ref|ZP_06703911.1| flagellar biosynthesis cell-proximal portion of basal-body rod [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294664589|ref|ZP_06729930.1| flagellar biosynthesis cell-proximal portion of basal-body rod [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|21108205|gb|AAM36847.1| flagellar biosynthesis cell-proximal portion of basal-body rod [Xanthomonas axonopodis pv. citri str. 306] gi|268589170|gb|ACZ06861.1| flagella basal body rod protein [Xanthomonas axonopodis pv. glycines] gi|292600446|gb|EFF44544.1| flagellar biosynthesis cell-proximal portion of basal-body rod [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292605646|gb|EFF48956.1| flagellar biosynthesis cell-proximal portion of basal-body rod [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 135 Score = 44.9 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 5/43 (11%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ + + + +M MI ++ + + +++ ++ L + Sbjct: 90 GYVFSPDVDPVSQMVNMISASRNYQAGVEMLNTAKELALATLT 132 Score = 35.6 bits (80), Expect = 5.5, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 31/84 (36%), Gaps = 8/84 (9%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKISF 58 F++ +A A RLST+A N++N D+V ++ I+ F + D Sbjct: 7 FDVAGSALHAQSVRLSTIASNLANADSVAGSAEATYKPIEPIFQA--QQSRQDPSLTSVN 64 Query: 59 VASGKEYLSKEVGSFISTGTELDF 82 V + + + D Sbjct: 65 VKEITTTNAPPIRRYEPGHPLADA 88 >gi|308273550|emb|CBX30152.1| hypothetical protein N47_D29610 [uncultured Desulfobacterium sp.] Length = 584 Score = 44.9 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 7/46 (15%), Positives = 19/46 (41%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 I +A A + + N++N +T G+ + + +++ Sbjct: 10 IANSALSAQRYGIEITSHNIANVNTNGYTRQNPIYEAKLPGSYSNL 55 Score = 44.5 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 7/38 (18%), Positives = 15/38 (39%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S + EM +I Q + + LI ++ + + Sbjct: 545 SAVSLDEEMANLIKFQQAYTAAAKLISIADEMLDTLLN 582 >gi|304392508|ref|ZP_07374448.1| flagellar basal-body rod protein FlgC [Ahrensia sp. R2A130] gi|303295138|gb|EFL89498.1| flagellar basal-body rod protein FlgC [Ahrensia sp. R2A130] Length = 138 Score = 44.9 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 31/93 (33%) Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNAN 205 G + K I + V + G P+ + S +G ++ N N Sbjct: 40 GGEPYQRKTITFTSALDQANAAQMVDVDKIGRDPSSFSAKFDPSSPGADAKGMVKMPNVN 99 Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 + EM M + + S ++ + + + I Sbjct: 100 VLVEMADMRDANRAYESNLQVMKQVQDMVTATI 132 Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 8/53 (15%), Positives = 20/53 (37%), Gaps = 7/53 (13%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIK 49 + + + A QRL V+ N++N + ++ + F+ + Sbjct: 7 AMKVASSGLAAQSQRLEVVSQNIANAQSTSRVAGGEPYQRKTITFTSALDQAN 59 >gi|296447440|ref|ZP_06889365.1| flagellar basal-body rod protein FlgC [Methylosinus trichosporium OB3b] gi|296255060|gb|EFH02162.1| flagellar basal-body rod protein FlgC [Methylosinus trichosporium OB3b] Length = 139 Score = 44.9 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 12/93 (12%), Positives = 28/93 (30%) Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNAN 205 G K I+ V+ G+ + + G+++ N N Sbjct: 40 GGAPYSRKTISFQSEVDRASGASLVQVGPIGVDRAPFRVEHDPGNPAADTDGYVKYPNVN 99 Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 M E+ M + + + ++ + + I Sbjct: 100 LMTEVADMREANRSYEANVQVMKQTRELFSMTI 132 Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats. Identities = 18/115 (15%), Positives = 39/115 (33%), Gaps = 2/115 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 S I + A RL VA+NM+N +V +S + ++++D+ Sbjct: 7 SMKIAGSGLSAQSARLRVVAENMANAQSVAKTAGGAPYSRKTISFQSEVDRASGASLVQV 66 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSAS 118 + + F + A + D + P ++T + + + Sbjct: 67 GPIGVDRAPFRVEHDPGNPAADTDGYVKY--PNVNLMTEVADMREANRSYEANVQ 119 >gi|226320911|ref|ZP_03796462.1| Flagellar hook-associated protein 1 [Borrelia burgdorferi 29805] gi|226233683|gb|EEH32413.1| Flagellar hook-associated protein 1 [Borrelia burgdorferi 29805] Length = 283 Score = 44.9 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 16/41 (39%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E+ MI Q F + + I + + + I + Sbjct: 242 SGVNKDEELANMIEFQQAFIAASKFITVSVELIDTVINKMG 282 >gi|281418802|ref|ZP_06249821.1| flagellar hook-associated protein FlgK [Clostridium thermocellum JW20] gi|281407886|gb|EFB38145.1| flagellar hook-associated protein FlgK [Clostridium thermocellum JW20] Length = 489 Score = 44.9 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 8/37 (21%), Positives = 15/37 (40%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 I + E+ LS N++N +T G+ + Sbjct: 5 GLEIARSGMYVNERALSVTGHNVANVNTKGYARQQAM 41 Score = 39.5 bits (90), Expect = 0.38, Method: Composition-based stats. Identities = 5/39 (12%), Positives = 15/39 (38%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 + EM M+ +++ + I+ + + I + Sbjct: 447 VSMDEEMSNMMRYKFAYSASSRAINVIDDMLETIITRMG 485 >gi|71906397|ref|YP_283984.1| flagellar hook-associated protein FlgK [Dechloromonas aromatica RCB] gi|71846018|gb|AAZ45514.1| Protein of unknown function DUF1078 [Dechloromonas aromatica RCB] Length = 683 Score = 44.9 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 25/67 (37%), Gaps = 2/67 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE--VVGAIKNDIDQKISF 58 M +I + A + L T +N+SN +T G+ +V + V Q Sbjct: 1 MSGLISIAVTGINAAQAGLLTTTNNISNLNTEGYTRQRVVQASNPTVMTGAGGFGQGAHV 60 Query: 59 VASGKEY 65 V + Y Sbjct: 61 VTVERMY 67 >gi|78047588|ref|YP_363763.1| flagellar basal body rod protein FlgC [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|84624086|ref|YP_451458.1| flagellar basal body rod protein FlgC [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|166712064|ref|ZP_02243271.1| flagellar basal body rod protein FlgC [Xanthomonas oryzae pv. oryzicola BLS256] gi|188576754|ref|YP_001913683.1| flagellar basal body rod protein FlgC [Xanthomonas oryzae pv. oryzae PXO99A] gi|188576945|ref|YP_001913874.1| flagellar basal body rod protein FlgC [Xanthomonas oryzae pv. oryzae PXO99A] gi|325927873|ref|ZP_08189097.1| flagellar basal-body rod protein FlgC [Xanthomonas perforans 91-118] gi|78036018|emb|CAJ23709.1| flagellar basal body rod protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|84368026|dbj|BAE69184.1| flagellar biosynthesis protein [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188521206|gb|ACD59151.1| flagellar basal-body rod protein FlgC [Xanthomonas oryzae pv. oryzae PXO99A] gi|188521397|gb|ACD59342.1| flagellar basal-body rod protein FlgC [Xanthomonas oryzae pv. oryzae PXO99A] gi|325541713|gb|EGD13231.1| flagellar basal-body rod protein FlgC [Xanthomonas perforans 91-118] Length = 135 Score = 44.9 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 5/43 (11%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ + + + +M MI ++ + + +++ ++ L + Sbjct: 90 GYVFSPDVDPVSQMVNMISASRNYQAGVEMLNTAKELALATLT 132 Score = 35.6 bits (80), Expect = 5.5, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 31/84 (36%), Gaps = 8/84 (9%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKISF 58 F++ +A A RLST+A N++N D+V ++ I+ F + D Sbjct: 7 FDVAGSALHAQSVRLSTIASNLANADSVAGSAEATYKPIEPIFQA--QQSRQDPSLTSVN 64 Query: 59 VASGKEYLSKEVGSFISTGTELDF 82 V + + + D Sbjct: 65 VKEITTTNAPPIRRYEPGHPLADA 88 >gi|153949847|ref|YP_001399640.1| flagellar hook-associated protein FlgK [Yersinia pseudotuberculosis IP 31758] gi|152961342|gb|ABS48803.1| flagellar hook-associated protein FlgK [Yersinia pseudotuberculosis IP 31758] Length = 453 Score = 44.9 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 8/53 (15%), Positives = 20/53 (37%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54 + A + L+ + N++N T G+ + + S + + I+ Sbjct: 1 MNFIKTAFSGMQATQAHLNATSMNIANIHTPGYSRQRAEQSAIGADGQGGINA 53 Score = 38.3 bits (87), Expect = 0.86, Method: Composition-based stats. Identities = 6/37 (16%), Positives = 15/37 (40%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N+ E ++ + + S +I +K + + Sbjct: 414 SGVNNDEEAINLMEYQRAYQSNMKVIATGDKLFSDLL 450 >gi|119947171|ref|YP_944851.1| flagellar hook-associated protein FlgK [Psychromonas ingrahamii 37] gi|119865775|gb|ABM05252.1| flagellar hook-associated protein FlgK [Psychromonas ingrahamii 37] Length = 454 Score = 44.9 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 17/79 (21%), Positives = 32/79 (40%), Gaps = 2/79 (2%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + +NI L+ A L+ A N++N +T G + S + ND+ + + Sbjct: 1 MSIYNIALSGVSANRTALNITAQNIANANTAGHSRQQAVQSSI--TRSNDVGAGVEVSSI 58 Query: 62 GKEYLSKEVGSFISTGTEL 80 + + S+ TEL Sbjct: 59 RRMADQFIISQLRSSNTEL 77 Score = 35.6 bits (80), Expect = 6.1, Method: Composition-based stats. Identities = 6/38 (15%), Positives = 13/38 (34%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S NS E ++ + + +I + +R Sbjct: 415 SGVNSDEEAANLMIYANAYEANMKVISTANQMFNSILR 452 >gi|256005260|ref|ZP_05430227.1| flagellar hook-associated protein FlgK [Clostridium thermocellum DSM 2360] gi|255990811|gb|EEU00926.1| flagellar hook-associated protein FlgK [Clostridium thermocellum DSM 2360] gi|316941863|gb|ADU75897.1| flagellar hook-associated protein FlgK [Clostridium thermocellum DSM 1313] Length = 489 Score = 44.9 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 8/37 (21%), Positives = 15/37 (40%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 I + E+ LS N++N +T G+ + Sbjct: 5 GLEIARSGMYVNERALSVTGHNVANVNTKGYARQQAM 41 Score = 39.5 bits (90), Expect = 0.38, Method: Composition-based stats. Identities = 5/39 (12%), Positives = 15/39 (38%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 + EM M+ +++ + I+ + + I + Sbjct: 447 VSMDEEMSNMMRYKFAYSASSRAINVIDDMLETIITRMG 485 >gi|146341894|ref|YP_001206942.1| flagellar basal body rod protein FlgC [Bradyrhizobium sp. ORS278] gi|146194700|emb|CAL78725.1| flagellar basal-body rod protein FlgC (cell-proximal rod protein) [Bradyrhizobium sp. ORS278] Length = 141 Score = 44.9 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 7/49 (14%), Positives = 19/49 (38%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G ++ N N + EM M + + + +I + + + + + Sbjct: 93 ASGNVKYPNVNPLIEMTDMRDAQRSYEANLNIIGATRRMIQRTLDILKT 141 Score = 44.5 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 9/56 (16%), Positives = 21/56 (37%), Gaps = 7/56 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKN 50 S I + A R+ +++N++N D+ +R F+ + + Sbjct: 9 LRSMTIATSGLRAQAGRMRVISENIANADSTAAKAGGDPYRRKVPTFTSALDRALD 64 >gi|310644334|ref|YP_003949093.1| flagellar hook-associated protein flgk [Paenibacillus polymyxa SC2] gi|309249285|gb|ADO58852.1| Flagellar hook-associated protein FlgK [Paenibacillus polymyxa SC2] Length = 522 Score = 44.9 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 6/41 (14%), Positives = 16/41 (39%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S + EM MI +++ + ++ + + I + Sbjct: 478 SGVSLDEEMSNMIKFQHAYSAAARFMTTFDQLLDKLINSTG 518 Score = 37.2 bits (84), Expect = 1.9, Method: Composition-based stats. Identities = 10/51 (19%), Positives = 19/51 (37%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54 S + L+T N++N +T G+ VK + I++ Sbjct: 7 SIETAKRSLFTQTAALNTTGHNIANANTEGYTRQTVKMKASIPMEAYGINR 57 >gi|307731356|ref|YP_003908580.1| flagellar hook-associated protein FlgK [Burkholderia sp. CCGE1003] gi|307585891|gb|ADN59289.1| flagellar hook-associated protein FlgK [Burkholderia sp. CCGE1003] Length = 657 Score = 44.9 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 27/220 (12%), Positives = 59/220 (26%), Gaps = 9/220 (4%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI---DQKIS 57 M N+GL+ A + L+T N+SN T G+ ++E G + Sbjct: 1 MSNLINLGLSGLNAAQWGLTTTGQNISNASTPGYTIETPVYAESGGQYTGSGYLPQGVST 60 Query: 58 FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSA 117 + + + + A L + G + + + Sbjct: 61 VTVTRQYSQYLTTQLNDAQSSSSSLATYNSLISQLNNLIGSPTAGIASAITSYFTGMQNV 120 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177 S L + Q + + + T +V + ++ Sbjct: 121 SNNASSLATRQTAMSGAQTLANQINAAGQQYDALRQSVNTQLNNTVSQINSYTQQIAQLN 180 Query: 178 SPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217 + + + + L SN + Q+I + Sbjct: 181 GQINAASTQDQPPNQLLDQRDLAVSN------LSQLIGVQ 214 Score = 36.4 bits (82), Expect = 3.7, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 13/37 (35%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N E ++ Q + + + +I + + Sbjct: 617 SGVNINEEAANLLQYQQLYQANSKVIQTAQTLFQTLL 653 >gi|254438373|ref|ZP_05051867.1| flagellar basal-body rod protein FlgC [Octadecabacter antarcticus 307] gi|198253819|gb|EDY78133.1| flagellar basal-body rod protein FlgC [Octadecabacter antarcticus 307] Length = 138 Score = 44.9 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 6/36 (16%), Positives = 15/36 (41%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + EM M+ +++F + ++ ML + Sbjct: 100 VDVNEEMVDMLEASRQFQNNLEVVTTMRTLMLRTVN 135 Score = 34.8 bits (78), Expect = 9.2, Method: Composition-based stats. Identities = 10/28 (35%), Positives = 16/28 (57%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTD 30 F+I + A RL+TVA N++N + Sbjct: 6 NVFDIAGRSMAAQMVRLNTVASNIANAN 33 >gi|183598623|ref|ZP_02960116.1| hypothetical protein PROSTU_02024 [Providencia stuartii ATCC 25827] gi|188020803|gb|EDU58843.1| hypothetical protein PROSTU_02024 [Providencia stuartii ATCC 25827] Length = 559 Score = 44.9 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 12/77 (15%), Positives = 26/77 (33%), Gaps = 2/77 (2%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISFV 59 N L+ A + LS +++N++N + F E G + + F Sbjct: 16 NNVMNNALSGVNAAQGGLSVISNNLANAGVGYYHRQSAVFGENPGTMTPNGYFGNGTYFS 75 Query: 60 ASGKEYLSKEVGSFIST 76 +E+ + + Sbjct: 76 HVRREFDEFINQQYGQS 92 >gi|170743258|ref|YP_001771913.1| flagellar basal body rod protein FlgC [Methylobacterium sp. 4-46] gi|168197532|gb|ACA19479.1| flagellar basal-body rod protein FlgC [Methylobacterium sp. 4-46] Length = 136 Score = 44.9 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 6/42 (14%), Positives = 16/42 (38%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G ++ N N + E M + + + ++ + + I Sbjct: 90 GDVQLPNVNLLVETVDMREAQRSYEANLNMVTAARRMISRTI 131 Score = 42.5 bits (98), Expect = 0.046, Method: Composition-based stats. Identities = 12/106 (11%), Positives = 29/106 (27%), Gaps = 8/106 (7%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDT----VG---FRTIKVKFSEVVGAIKN-DID 53 + I + A R+ +++N++N D+ G +R F+ + + + Sbjct: 4 MKAIGIAASGLRAQSGRMRVISENIANADSEPTRAGVEPYRRKVPTFANRLDRELDARMV 63 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 + +K + D L Sbjct: 64 DLGRVRRDQAPFRTKHDPGNPVADAKGDVQLPNVNLLVETVDMREA 109 >gi|332140544|ref|YP_004426282.1| flagellar basal-body rod protein FlgC [Alteromonas macleodii str. 'Deep ecotype'] gi|327550566|gb|AEA97284.1| flagellar basal-body rod protein FlgC [Alteromonas macleodii str. 'Deep ecotype'] Length = 140 Score = 44.9 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 20/43 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N + EM M+ ++ + + + D ++ ++ Sbjct: 93 GYIYKPNVNIVEEMANMMSASKAYETNVQVADTTKRIFRRVLQ 135 Score = 35.6 bits (80), Expect = 5.9, Method: Composition-based stats. Identities = 12/55 (21%), Positives = 20/55 (36%), Gaps = 6/55 (10%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKND 51 I A RL+T A N++N ++V +R F+ + D Sbjct: 5 NVMQISSTGMEAENVRLNTTASNIANANSVSSSYDETYRARHPVFATALQDAMRD 59 >gi|332533178|ref|ZP_08409047.1| flagellar basal-body rod protein FlgB [Pseudoalteromonas haloplanktis ANT/505] gi|332037460|gb|EGI73914.1| flagellar basal-body rod protein FlgB [Pseudoalteromonas haloplanktis ANT/505] Length = 135 Score = 44.9 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 27/55 (49%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65 A L QR +A N++N DT G++ + F+ + A ++ + V + ++ Sbjct: 15 AMLIRSQRAELIATNIANADTPGYKAKDIDFASALKAARSTQQSGNTMVRTNDKH 69 >gi|307718595|ref|YP_003874127.1| flagellar basal-body rod protein [Spirochaeta thermophila DSM 6192] gi|306532320|gb|ADN01854.1| flagellar basal-body rod protein [Spirochaeta thermophila DSM 6192] Length = 138 Score = 44.9 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 8/34 (23%), Positives = 16/34 (47%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV 45 R +A+N++N DT F+ ++ F + Sbjct: 18 MDVNLIRRQIIANNIANADTPNFKRSELNFESSL 51 >gi|167945455|ref|ZP_02532529.1| flagellar hook protein FlgE [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 188 Score = 44.9 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 9/65 (13%), Positives = 27/65 (41%), Gaps = 5/65 (7%) Query: 155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVT-----VKRGFLEDSNANSMYE 209 + + + + +QG + ++ + ++ T ++ G LE+SN + + Sbjct: 124 LGKVAMARFNNNQGLRQVGDTRWVESFASGDVQLGEAGTSSFGLMQSGALENSNVDLAEQ 183 Query: 210 MGQMI 214 + +I Sbjct: 184 LVNLI 188 >gi|330445355|ref|ZP_08309007.1| flagellar hook-associated protein FlgK [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489546|dbj|GAA03504.1| flagellar hook-associated protein FlgK [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 777 Score = 44.9 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 8/47 (17%), Positives = 17/47 (36%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51 +G++ +++L + N+SN T G+ V Sbjct: 6 MQLGISGLRTSQKQLDVTSHNISNVHTPGYSRQVVDQKAADAQWSGG 52 >gi|221639497|ref|YP_002525759.1| Flagellar proximal rod protein FlgC [Rhodobacter sphaeroides KD131] gi|221160278|gb|ACM01258.1| Flagellar proximal rod protein FlgC [Rhodobacter sphaeroides KD131] Length = 139 Score = 44.9 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 30/87 (34%), Gaps = 6/87 (6%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDT------VGFRTIKVKFSEVVGAIKNDIDQK 55 + F++G A A R++TVA N++N T FR ++ F Sbjct: 6 DSVFDVGARALSAQMVRMNTVASNLANAGTVSDKAETAFRPLRPVFETSYADAVGRTGLS 65 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDF 82 + VA + + + D Sbjct: 66 TTDVAGVVSLDREPARVYRPDHPQADP 92 Score = 35.2 bits (79), Expect = 7.8, Method: Composition-based stats. Identities = 4/36 (11%), Positives = 13/36 (36%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + EM +M+ ++++ + + M Sbjct: 101 VSVDEEMVEMMEASRQYQNTLEAVSTLRSLMARTAS 136 >gi|32476538|ref|NP_869532.1| flagellar hook-associated protein [Rhodopirellula baltica SH 1] gi|32447084|emb|CAD76893.1| probable flagellar hook-associated protein [Rhodopirellula baltica SH 1] Length = 584 Score = 44.9 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 7/51 (13%), Positives = 20/51 (39%) Query: 188 DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 + +++ L + N E +MI + F + + +I + + + Sbjct: 532 NDLYASLQSQHLAITGVNIDEESIKMISYQRAFQASSRVISTAAEMLDILL 582 Score = 42.5 bits (98), Expect = 0.046, Method: Composition-based stats. Identities = 13/73 (17%), Positives = 31/73 (42%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A A + L V +N++N +T G+ +++ + V + ++ Q A+G + + Sbjct: 35 ALDAAQIGLQVVGNNIANANTEGYIRQRLEQTPAVAYRQGNLIQGHGVRATGVVQVIDQQ 94 Query: 71 GSFISTGTELDFA 83 + + A Sbjct: 95 LAERMFNAKTAAA 107 >gi|307718454|ref|YP_003873986.1| flagellar hook-associated protein [Spirochaeta thermophila DSM 6192] gi|306532179|gb|ADN01713.1| flagellar hook-associated protein [Spirochaeta thermophila DSM 6192] Length = 624 Score = 44.5 bits (103), Expect = 0.011, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 14/41 (34%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E+ QMI + + I + I +A Sbjct: 583 SGVNIDEELAQMIKFQHGYAASARFITTFNSMLDLLINRMA 623 Score = 38.7 bits (88), Expect = 0.66, Method: Composition-based stats. Identities = 15/41 (36%), Positives = 19/41 (46%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44 S IG LA Q L+TV NMSN G+ +V + Sbjct: 7 SIEIGKRGLLAHTQGLATVGHNMSNASVEGYSRQRVNLEAM 47 >gi|291534845|emb|CBL07957.1| flagellar hook-associated protein FlgK [Roseburia intestinalis M50/1] Length = 613 Score = 44.5 bits (103), Expect = 0.012, Method: Composition-based stats. Identities = 10/37 (27%), Positives = 17/37 (45%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 I + A + L+T A+N+SN T G+ + Sbjct: 7 GLTIASSGLSAYQVALNTSANNISNVQTKGYSKQQAN 43 >gi|302874586|ref|YP_003843219.1| flagellar basal-body rod protein FlgB [Clostridium cellulovorans 743B] gi|307690803|ref|ZP_07633249.1| flagellar basal body rod protein FlgB [Clostridium cellulovorans 743B] gi|302577443|gb|ADL51455.1| flagellar basal-body rod protein FlgB [Clostridium cellulovorans 743B] Length = 129 Score = 44.5 bits (103), Expect = 0.012, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 21/41 (51%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 A+ R VA+N++N +T GF+ V F E + DI Sbjct: 16 LDAVAIRNRVVANNIANINTKGFKRQYVSFEEQLKKSVKDI 56 >gi|240145382|ref|ZP_04743983.1| flagellar hook-associated protein FlgK [Roseburia intestinalis L1-82] gi|257202503|gb|EEV00788.1| flagellar hook-associated protein FlgK [Roseburia intestinalis L1-82] Length = 613 Score = 44.5 bits (103), Expect = 0.012, Method: Composition-based stats. Identities = 10/37 (27%), Positives = 17/37 (45%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 I + A + L+T A+N+SN T G+ + Sbjct: 7 GLTIASSGLSAYQVALNTSANNISNVQTKGYSKQQAN 43 >gi|225181614|ref|ZP_03735055.1| flagellar basal-body rod protein FlgB [Dethiobacter alkaliphilus AHT 1] gi|225167722|gb|EEG76532.1| flagellar basal-body rod protein FlgB [Dethiobacter alkaliphilus AHT 1] Length = 137 Score = 44.5 bits (103), Expect = 0.012, Method: Composition-based stats. Identities = 10/71 (14%), Positives = 23/71 (32%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A +R +A N++N +T F+ V F + + + + ++ Sbjct: 16 GLDAAGERNRVMAHNVANVNTPMFKRQDVSFEKQLRQALAAPSRLPLATTHERHVGGQKS 75 Query: 71 GSFISTGTELD 81 + D Sbjct: 76 LQDVGHKVSTD 86 >gi|332305613|ref|YP_004433464.1| flagellar basal-body rod protein FlgC [Glaciecola agarilytica 4H-3-7+YE-5] gi|332172942|gb|AEE22196.1| flagellar basal-body rod protein FlgC [Glaciecola agarilytica 4H-3-7+YE-5] Length = 140 Score = 44.5 bits (103), Expect = 0.012, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 20/43 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N + EM M+ ++ + + + D ++ +R Sbjct: 93 GYIYKPNVNIVEEMADMMSASKAYETNVQVADTTKRLFRNVLR 135 Score = 39.9 bits (91), Expect = 0.35, Method: Composition-based stats. Identities = 14/84 (16%), Positives = 27/84 (32%), Gaps = 6/84 (7%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56 +I A RL+T A N++N ++V ++ F+ + D + Sbjct: 5 NVMDIASTGMSAQSVRLNTTASNVANANSVSSSYDQTYKARHPVFAAELQRASQDQNAGT 64 Query: 57 SFVASGKEYLSKEVGSFISTGTEL 80 G + S G + Sbjct: 65 GVQVLGVVESQAPLQIEYSPGHPM 88 >gi|315186392|gb|EFU20152.1| flagellar basal-body rod protein FlgB [Spirochaeta thermophila DSM 6578] Length = 138 Score = 44.5 bits (103), Expect = 0.012, Method: Composition-based stats. Identities = 8/34 (23%), Positives = 16/34 (47%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV 45 R +A+N++N DT F+ ++ F + Sbjct: 18 MDVNLIRRQIIANNIANADTPNFKRSELNFESSL 51 >gi|222100201|ref|YP_002534769.1| Flagellar basal-body rod protein FlgB [Thermotoga neapolitana DSM 4359] gi|221572591|gb|ACM23403.1| Flagellar basal-body rod protein FlgB [Thermotoga neapolitana DSM 4359] Length = 137 Score = 44.5 bits (103), Expect = 0.012, Method: Composition-based stats. Identities = 18/125 (14%), Positives = 35/125 (28%), Gaps = 8/125 (6%) Query: 1 MQTS-FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK------NDID 53 M S F A R + N++N T G++ V F E + K + Sbjct: 11 MFNSNFYTLKQAMDVSLLRQKIHSLNIANVSTPGYKRKYVAFEEFLKESKMRLELARTSE 70 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFAL-EGDAWFALESPRGIILTRDGRFKVTDDG 112 + + E + + R +LTR + Sbjct: 71 KHLGGSQRVVEPRVLTQNDTTMRNDGNNVDIDYEMVQLVKNGLRYQVLTRLMSMNIDRYN 130 Query: 113 SLVSA 117 +++ + Sbjct: 131 AVLRS 135 >gi|254511786|ref|ZP_05123853.1| flagellar hook-associated protein FlgK [Rhodobacteraceae bacterium KLH11] gi|221535497|gb|EEE38485.1| flagellar hook-associated protein FlgK [Rhodobacteraceae bacterium KLH11] Length = 483 Score = 44.5 bits (103), Expect = 0.012, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 19/40 (47%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 M T+ N L A + + V+ N++N T G+ ++ Sbjct: 3 MSTALNNALGGLNAASRGAAVVSGNIANALTPGYARRTLE 42 >gi|206603517|gb|EDZ39997.1| Flagellar hook-associated protein (FlgK) [Leptospirillum sp. Group II '5-way CG'] Length = 561 Score = 44.5 bits (103), Expect = 0.012, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 1/57 (1%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 NIG + A E LST N+SN +T G+ V+F + + V + Sbjct: 8 LNIGKSGIEANEAGLSTAGQNISNVNTPGYTVENVQF-DQTQPNHGSPGMVGNGVRA 63 >gi|312879580|ref|ZP_07739380.1| flagellar basal-body rod protein FlgB [Aminomonas paucivorans DSM 12260] gi|310782871|gb|EFQ23269.1| flagellar basal-body rod protein FlgB [Aminomonas paucivorans DSM 12260] Length = 134 Score = 44.5 bits (103), Expect = 0.012, Method: Composition-based stats. Identities = 15/98 (15%), Positives = 31/98 (31%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 L +R+ + N++N +T + +V F + + A+ + V G + G Sbjct: 14 LEGLSRRMGSTTQNLANANTPKYVRREVSFEDQLEALIEAPRRLPLAVTDGHHMTNMPKG 73 Query: 72 SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109 E E + L R ++ Sbjct: 74 IEFVHPVESRVGNEVYRYDENNVDPETELARLAETRMM 111 >gi|317153861|ref|YP_004121909.1| flagellar basal body rod protein [Desulfovibrio aespoeensis Aspo-2] gi|316944112|gb|ADU63163.1| flagellar basal body rod protein [Desulfovibrio aespoeensis Aspo-2] Length = 108 Score = 44.5 bits (103), Expect = 0.012, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 19/46 (41%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G +E SN + EM MI F++ + +E + IA Sbjct: 63 GGVEGSNTDIGTEMVGMIRTGHAFSANVAAVRASEDMTGHLLNMIA 108 Score = 42.5 bits (98), Expect = 0.053, Method: Composition-based stats. Identities = 11/48 (22%), Positives = 17/48 (35%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54 L+A AL A+N++N +T GF V + Sbjct: 4 TNLSALSALSTVQQVSANNIANVNTDGFSASSVTLESGPADQGVRVGS 51 >gi|224825783|ref|ZP_03698887.1| flagellar hook-associated protein FlgK [Lutiella nitroferrum 2002] gi|224602007|gb|EEG08186.1| flagellar hook-associated protein FlgK [Lutiella nitroferrum 2002] Length = 457 Score = 44.5 bits (103), Expect = 0.012, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 23/53 (43%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54 L+ +A + L+TV+ N+SN T G+ V S +V + + Sbjct: 1 MRMIQNALSGAIAAQAALNTVSQNLSNEMTPGYSRQGVLLSTLVPGAGDRLGA 53 >gi|167948873|ref|ZP_02535947.1| Flagellar basal-body rod protein FlgB [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 127 Score = 44.5 bits (103), Expect = 0.012, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 21/42 (50%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 A L +R +A N++N DT G++ F +V+ + + Sbjct: 11 ALLLRARRSELIASNLANADTPGYKARDFDFHKVLQQAQGEP 52 >gi|115523177|ref|YP_780088.1| flagellar basal body rod protein FlgC [Rhodopseudomonas palustris BisA53] gi|115517124|gb|ABJ05108.1| flagellar basal-body rod protein FlgC [Rhodopseudomonas palustris BisA53] Length = 138 Score = 44.5 bits (103), Expect = 0.012, Method: Composition-based stats. Identities = 14/103 (13%), Positives = 31/103 (30%), Gaps = 8/103 (7%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKF-SEVVGAIKNDIDQK 55 S I + RL V++N++N ++ G +R F +E+ A + + Sbjct: 8 SIQIASSGLEVQSTRLRVVSENLANANSTGRAPGAEPYRRKTTTFAAEMDRAQGVRVVKV 67 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98 + + S + + L + Sbjct: 68 KDVGVDRTPFRVEYEPSHPAADQDGYVKLPNVNTLIEMADMRE 110 Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 12/98 (12%), Positives = 31/98 (31%) Query: 145 KGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNA 204 G + K V+ ++ G+ E + G+++ N Sbjct: 40 PGAEPYRRKTTTFAAEMDRAQGVRVVKVKDVGVDRTPFRVEYEPSHPAADQDGYVKLPNV 99 Query: 205 NSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 N++ EM M + + + ++ + + I + Sbjct: 100 NTLIEMADMRETNRSYEANLQVVKQARSMVSMTIDMLR 137 >gi|285018211|ref|YP_003375922.1| flagellar basal body rod protein [Xanthomonas albilineans GPE PC73] gi|283473429|emb|CBA15934.1| probable flagellar basal body rod protein [Xanthomonas albilineans] Length = 135 Score = 44.5 bits (103), Expect = 0.012, Method: Composition-based stats. Identities = 4/43 (9%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ + + + +M +I ++ + + +++ ++ L + Sbjct: 90 GYIYSPDIDPVSQMVNLISASRNYQAGVEVLNTAKELALSTLT 132 Score = 39.5 bits (90), Expect = 0.43, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 6/46 (13%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEV 44 F++ +A A R+ST+A N++N D+V ++ I+ F V Sbjct: 7 FDVAGSALQAQSVRMSTIASNLANADSVAGSAEAAYKPIEPIFQAV 52 >gi|114566382|ref|YP_753536.1| hypothetical protein Swol_0846 [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337317|gb|ABI68165.1| conserved hypothetical protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 138 Score = 44.5 bits (103), Expect = 0.012, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 25/64 (39%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A R +ADN++N DT F+ +V F E + ++ + ++ E Sbjct: 17 AMDVGTLRNDVIADNIANADTPKFKRREVIFEEKMKKALEGTTDQLGLNLTNSRHIQMEG 76 Query: 71 GSFI 74 + Sbjct: 77 NNMD 80 >gi|302338074|ref|YP_003803280.1| flagellar basal-body rod protein FlgB [Spirochaeta smaragdinae DSM 11293] gi|301635259|gb|ADK80686.1| flagellar basal-body rod protein FlgB [Spirochaeta smaragdinae DSM 11293] Length = 138 Score = 44.5 bits (103), Expect = 0.012, Method: Composition-based stats. Identities = 10/67 (14%), Positives = 19/67 (28%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 + R +A+N++N DT ++ V F + + A E Sbjct: 17 SMDVEMLRRQVMANNIANADTPNYKRSVVNFESQLARALDSEKVTKPQAALTNERHIPFN 76 Query: 71 GSFISTG 77 Sbjct: 77 RVQNYRD 83 >gi|254504553|ref|ZP_05116704.1| flagellar hook-associated protein FlgK [Labrenzia alexandrii DFL-11] gi|222440624|gb|EEE47303.1| flagellar hook-associated protein FlgK [Labrenzia alexandrii DFL-11] Length = 631 Score = 44.5 bits (103), Expect = 0.012, Method: Composition-based stats. Identities = 9/48 (18%), Positives = 20/48 (41%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50 ++ N + ++++ A N++N DT G+ V + N Sbjct: 5 SALNTAVFGISFNQRQIDVTASNIANADTAGYSKKTVSANAYFDGDGN 52 Score = 37.5 bits (85), Expect = 1.7, Method: Composition-based stats. Identities = 6/36 (16%), Positives = 14/36 (38%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 N EM ++ L +++ ++ M E + Sbjct: 593 VNLDAEMAFLVQLENAYSANARVMQTINDLMQELLN 628 >gi|218679061|ref|ZP_03526958.1| hypothetical protein RetlC8_09354 [Rhizobium etli CIAT 894] Length = 101 Score = 44.5 bits (103), Expect = 0.012, Method: Composition-based stats. Identities = 10/39 (25%), Positives = 20/39 (51%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44 N L+ A R+ +A+N++N+ T G+ + + V Sbjct: 8 NTALSGMRAQTTRIGAIANNVANSSTSGYARLNTSLTSV 46 >gi|206896029|ref|YP_002246681.1| flagellar basal-body rod protein FlgC [Coprothermobacter proteolyticus DSM 5265] gi|206738646|gb|ACI17724.1| flagellar basal-body rod protein FlgC [Coprothermobacter proteolyticus DSM 5265] Length = 134 Score = 44.5 bits (103), Expect = 0.012, Method: Composition-based stats. Identities = 16/114 (14%), Positives = 31/114 (27%), Gaps = 6/114 (5%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKNDIDQKI 56 + I +A A R+ ++ N++N +T G + V F ++ K+ Sbjct: 5 SLLRIAGSALTAQRFRMDVISSNIANLETTRTPEGGPYHRKIVSFQSMMVGENQGQGVKV 64 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTD 110 + + S E D E + R Sbjct: 65 AQLTEDPSERLVYDPSHPDADPETGMVHYPDMDLITELTDLMSAQRSFEMNSNA 118 Score = 40.2 bits (92), Expect = 0.27, Method: Composition-based stats. Identities = 11/123 (8%), Positives = 29/123 (23%), Gaps = 1/123 (0%) Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171 G + + I E + I + V +QG Sbjct: 3 GFSLLRIAGSALTAQRFRMDVISSNIANLETTRTPEGGPYHRKIVSFQSMMVGENQGQGV 62 Query: 172 RENSGISPNIPPTPLEDL-SGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + + + G + + + + E+ ++ + F + I Sbjct: 63 KVAQLTEDPSERLVYDPSHPDADPETGMVHYPDMDLITELTDLMSAQRSFEMNSNAIAIA 122 Query: 231 EKS 233 + Sbjct: 123 RQV 125 >gi|203284102|ref|YP_002221842.1| flagellar hook-associated protein [Borrelia duttonii Ly] gi|201083545|gb|ACH93136.1| flagellar hook-associated protein [Borrelia duttonii Ly] Length = 627 Score = 44.5 bits (103), Expect = 0.012, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 17/41 (41%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E+ MI Q F + + I+ + + + I + Sbjct: 586 SGVNKDEELANMIEFQQSFIAASKFINVSAELIDTIINKMG 626 >gi|16799793|ref|NP_470061.1| flagellar basal body rod protein FlgB [Listeria innocua Clip11262] gi|16413170|emb|CAC95950.1| lin0718 [Listeria innocua Clip11262] gi|313620053|gb|EFR91568.1| flagellar basal-body rod protein FlgB [Listeria innocua FSL S4-378] Length = 133 Score = 44.5 bits (103), Expect = 0.012, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 18/44 (40%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK 55 L+ V++N++N +T F+ + F E GA Sbjct: 12 LNYLQTANQVVSNNIANANTPNFKASEASFEESFGASLRASGSN 55 >gi|157736472|ref|YP_001489155.1| flagellar hook-associated protein FlgK [Arcobacter butzleri RM4018] gi|157698326|gb|ABV66486.1| flagellar hook-associated protein FlgK [Arcobacter butzleri RM4018] Length = 636 Score = 44.5 bits (103), Expect = 0.012, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 31/78 (39%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 FN+ A + TV++N++N DT G++ SE+ + + ++ + Sbjct: 7 FNVAQTGLSASRYGIETVSNNIANKDTDGYKKRVTDLSEIGQMGSSITGRGVNVDGVSRV 66 Query: 65 YLSKEVGSFISTGTELDF 82 ++ T+ + Sbjct: 67 TSQYLYDNYTKEYTKTSY 84 Score = 40.6 bits (93), Expect = 0.19, Method: Composition-based stats. Identities = 4/35 (11%), Positives = 15/35 (42%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 + EM ++ L +++ +I ++ + + Sbjct: 598 VDEDDEMVNLMKLQAAYSANAQMITAVDEMIKVIL 632 >gi|148261124|ref|YP_001235251.1| flagellar basal body rod protein FlgC [Acidiphilium cryptum JF-5] gi|326404525|ref|YP_004284607.1| flagellar basal-body rod protein FlgC [Acidiphilium multivorum AIU301] gi|146402805|gb|ABQ31332.1| flagellar basal-body rod protein FlgC [Acidiphilium cryptum JF-5] gi|325051387|dbj|BAJ81725.1| flagellar basal-body rod protein FlgC [Acidiphilium multivorum AIU301] Length = 134 Score = 44.5 bits (103), Expect = 0.012, Method: Composition-based stats. Identities = 17/119 (14%), Positives = 40/119 (33%) Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 D I + G + K I+ ++S V+ N G Sbjct: 13 GLSAQDARLQVIAQNLANADSTGSTPGSNPYQRKTISFQDVFSQTTGTDLVQVANIGKDT 72 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 P + + +G+++ N NS+ E+ M + +++ ++++ M + Sbjct: 73 APFPMKYDPSNPAANAQGYVKLPNVNSLVELMDMQQAERSYDANLSVMNATRGMMTRTL 131 Score = 43.7 bits (101), Expect = 0.023, Method: Composition-based stats. Identities = 16/126 (12%), Positives = 32/126 (25%), Gaps = 11/126 (8%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKN----DID 53 +I A A + RL +A N++N D+ G ++ + F +V + Sbjct: 7 LDITAAGLSAQDARLQVIAQNLANADSTGSTPGSNPYQRKTISFQDVFSQTTGTDLVQVA 66 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113 A + + G + + G Sbjct: 67 NIGKDTAPFPMKYDPSNPAANAQGYVKLPNVNSLVELMDMQQAERSYDANLSVMNATRGM 126 Query: 114 LVSASG 119 + G Sbjct: 127 MTRTLG 132 >gi|283853239|ref|ZP_06370490.1| flagellar basal-body rod protein FlgC [Desulfovibrio sp. FW1012B] gi|283571344|gb|EFC19353.1| flagellar basal-body rod protein FlgC [Desulfovibrio sp. FW1012B] Length = 146 Score = 44.5 bits (103), Expect = 0.012, Method: Composition-based stats. Identities = 12/71 (16%), Positives = 25/71 (35%), Gaps = 6/71 (8%) Query: 168 GFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 G V P P + G++ + N + EM MI + + + ++ I Sbjct: 78 GLVNDNRPFRMQYEPGHPDANAD------GYVAYPDINVVEEMANMITAMRSYEASSSSI 131 Query: 228 DENEKSMLEAI 238 + +A+ Sbjct: 132 GTVKNMFTKAL 142 Score = 38.3 bits (87), Expect = 0.86, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 18/34 (52%), Gaps = 2/34 (5%) Query: 1 MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTV 32 M T+ +IG + A ++T++ N++N T Sbjct: 1 MDLFTALDIGSSGMSAQRTLMNTISMNLANIKTT 34 >gi|254434266|ref|ZP_05047774.1| flagellar basal-body rod protein FlgB [Nitrosococcus oceani AFC27] gi|207090599|gb|EDZ67870.1| flagellar basal-body rod protein FlgB [Nitrosococcus oceani AFC27] Length = 148 Score = 44.5 bits (103), Expect = 0.012, Method: Composition-based stats. Identities = 10/94 (10%), Positives = 29/94 (30%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIS 75 +R +A N++N DT G++ + F + + + A + + + Sbjct: 37 SRRAEVLAANLANGDTPGYKARDIDFKAALQQAQGQGLPLQATHAGHVSHSLGQFPGGEA 96 Query: 76 TGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109 A + + +++ + Sbjct: 97 LYRIPQQASLDGNTVDSQVEHSEFMQNALQYQAS 130 >gi|313634367|gb|EFS00963.1| flagellar hook-associated protein FlgK [Listeria seeligeri FSL N1-067] Length = 479 Score = 44.5 bits (103), Expect = 0.013, Method: Composition-based stats. Identities = 16/126 (12%), Positives = 34/126 (26%), Gaps = 3/126 (2%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 FN L+ A + N+SN +T G+ V + K + Sbjct: 6 FNTSLSGMSAAQIANMVAQQNISNMNTPGYIRQAVDQQALYSDGGLLGGNKQTGYGVKVT 65 Query: 65 YLSKEVGSFISTGTELDFALEGDAWFAL---ESPRGIILTRDGRFKVTDDGSLVSASGKY 121 + + ++T A + + + + T + + +A G Sbjct: 66 DIKRLTNVALTTQYNNQIAKQSASLYESGALNQALNLFGTPGKNTPSDNLDNFFTAWGAL 125 Query: 122 PVLDMA 127 Sbjct: 126 AKNPDQ 131 >gi|295678051|ref|YP_003606575.1| flagellar hook-associated protein FlgK [Burkholderia sp. CCGE1002] gi|295437894|gb|ADG17064.1| flagellar hook-associated protein FlgK [Burkholderia sp. CCGE1002] Length = 664 Score = 44.5 bits (103), Expect = 0.013, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 29/80 (36%), Gaps = 1/80 (1%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 NIGL+ A + L+T +N+SN T G+ FSE VG V++ Sbjct: 4 NLLNIGLSGLNAAQWGLTTTGENISNASTPGYTMETPVFSE-VGGNYTGSGYLPMGVSTD 62 Query: 63 KEYLSKEVGSFISTGTELDF 82 + T + Sbjct: 63 TVTRAYSQYLTTELNTAQSW 82 Score = 38.3 bits (87), Expect = 0.99, Method: Composition-based stats. Identities = 13/122 (10%), Positives = 34/122 (27%), Gaps = 6/122 (4%) Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 A G + + + ++ + K ++ G T S + G + Sbjct: 545 ADGDSFTIGPNTGATNDGRNAQLLSNLTKAQVLAGGTATLTNAYASYVNNIGNQATQIQA 604 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 ++ + S G N E ++ Q + + + +I + Sbjct: 605 MATTQTSLVTQITSAQQSVSG------VNINEEAANLLQYQQLYQANSKVIQTAQTLFQT 658 Query: 237 AI 238 + Sbjct: 659 LL 660 >gi|220917708|ref|YP_002493012.1| flagellar hook-associated protein FlgK [Anaeromyxobacter dehalogenans 2CP-1] gi|219955562|gb|ACL65946.1| flagellar hook-associated protein FlgK [Anaeromyxobacter dehalogenans 2CP-1] Length = 469 Score = 44.5 bits (103), Expect = 0.013, Method: Composition-based stats. Identities = 5/38 (13%), Positives = 17/38 (44%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S + E+ +M + +++I+ +I + + + Sbjct: 429 ASGVSVDEELLEMEKAQRAYDAISKVIQASSEMFDTLL 466 Score = 36.0 bits (81), Expect = 5.0, Method: Composition-based stats. Identities = 5/43 (11%), Positives = 13/43 (30%) Query: 24 DNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66 N+ N +T G+ + + + A + + Sbjct: 27 HNLQNANTPGYARQRAVLATTLPAQQAGGAWIGRGATLAQVTQ 69 >gi|451871|gb|AAB59019.1| flagellar hook-filament junction protein [Bacillus subtilis] Length = 129 Score = 44.5 bits (103), Expect = 0.013, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 35/92 (38%), Gaps = 2/92 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS--EVVGAIKNDIDQKISFVAS 61 A A + LST A+N++N +T G+ +V + A+ + ++ + + Sbjct: 7 GLETARRALSAQQAALSTTANNVANANTDGYTRQRVSLEATDYFPAVSKNAEKTAGQMGT 66 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALE 93 G + S E I + ++ + Sbjct: 67 GVQGKSVERIRDIFLDYQYRLQNNSAGYYDTK 98 >gi|188991643|ref|YP_001903653.1| flagellar basal body rod protein FlgC [Xanthomonas campestris pv. campestris str. B100] gi|167733403|emb|CAP51604.1| unnamed protein product [Xanthomonas campestris pv. campestris] Length = 135 Score = 44.5 bits (103), Expect = 0.013, Method: Composition-based stats. Identities = 5/43 (11%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ + + + +M MI ++ + + +++ ++ L + Sbjct: 90 GYVFSPDVDPVSQMVNMISASRNYQAGVEMLNTAKELALATLT 132 Score = 35.6 bits (80), Expect = 6.5, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 31/84 (36%), Gaps = 8/84 (9%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKISF 58 F++ +A A RLST+A N++N D+V ++ I+ F + D Sbjct: 7 FDVAGSALHAQSVRLSTIASNLANADSVAGSAEATYKPIEPIFQA--QQNRQDPSLTSVN 64 Query: 59 VASGKEYLSKEVGSFISTGTELDF 82 V + + + D Sbjct: 65 VKEITTTNAPPIRRYEPGHPLADA 88 >gi|163939550|ref|YP_001644434.1| flagellar basal body rod protein FlgC [Bacillus weihenstephanensis KBAB4] gi|229132557|ref|ZP_04261406.1| Flagellar basal-body rod protein FlgC [Bacillus cereus BDRD-ST196] gi|163861747|gb|ABY42806.1| flagellar basal-body rod protein FlgC [Bacillus weihenstephanensis KBAB4] gi|228650903|gb|EEL06889.1| Flagellar basal-body rod protein FlgC [Bacillus cereus BDRD-ST196] Length = 137 Score = 44.5 bits (103), Expect = 0.013, Method: Composition-based stats. Identities = 6/33 (18%), Positives = 14/33 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG 33 M + N + + + ++N+ N +T G Sbjct: 1 MFQAINASGSGLTTARKWMEVTSNNIVNANTTG 33 Score = 43.7 bits (101), Expect = 0.023, Method: Composition-based stats. Identities = 7/40 (17%), Positives = 22/40 (55%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 G++ N + EM ++ + + + T++++ N+K + + Sbjct: 91 GYVRYPNIDVTAEMTNVMVAQKMYEANTSVLNANKKMLDK 130 >gi|332669187|ref|YP_004452195.1| flagellar basal-body rod protein FlgB [Cellulomonas fimi ATCC 484] gi|332338225|gb|AEE44808.1| flagellar basal-body rod protein FlgB [Cellulomonas fimi ATCC 484] Length = 115 Score = 44.5 bits (103), Expect = 0.013, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 39/91 (42%), Gaps = 1/91 (1%) Query: 2 QTSFNIGL-AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 + + L +A L R ++ADN++N T GF +V+F + + D + Sbjct: 5 DSVSFVALNSALDGLALRQRSIADNVANIQTPGFHARRVRFEDELTRAVAHGDGAVQAST 64 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFA 91 S ++E G+ ++ E ++ + + Sbjct: 65 SRSLEPTRENGNNVNLDAETLLNIDTNLRYQ 95 >gi|327543408|gb|EGF29832.1| flagellar hook-associated protein FlgK [Rhodopirellula baltica WH47] Length = 562 Score = 44.5 bits (103), Expect = 0.013, Method: Composition-based stats. Identities = 7/51 (13%), Positives = 20/51 (39%) Query: 188 DLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 + +++ L + N E +MI + F + + +I + + + Sbjct: 510 NDLYASLQSQHLAITGVNIDEESIKMISYQRAFQASSRVISTAAEMLDILL 560 Score = 42.5 bits (98), Expect = 0.050, Method: Composition-based stats. Identities = 13/73 (17%), Positives = 31/73 (42%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A A + L V +N++N +T G+ +++ + V + ++ Q A+G + + Sbjct: 13 ALDAAQIGLQVVGNNIANANTEGYIRQRLEQTPAVAYRQGNLIQGHGVRATGVVQVIDQQ 72 Query: 71 GSFISTGTELDFA 83 + + A Sbjct: 73 LAERMFNAKTAAA 85 >gi|218778520|ref|YP_002429838.1| flagellar basal-body rod protein FlgC [Desulfatibacillum alkenivorans AK-01] gi|218759904|gb|ACL02370.1| Flagellar basal-body rod protein FlgC [Desulfatibacillum alkenivorans AK-01] Length = 142 Score = 44.5 bits (103), Expect = 0.013, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 19/42 (45%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G L+ N N + EM M+ + ++S + L+A+ Sbjct: 97 GNLQLPNVNVVTEMANMLMAKRVYDSNAAALSTARSMALKAL 138 Score = 40.6 bits (93), Expect = 0.21, Method: Composition-based stats. Identities = 6/34 (17%), Positives = 17/34 (50%), Gaps = 2/34 (5%) Query: 1 MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTV 32 M + + +A +++ V++N++N +T Sbjct: 1 MDLLNAMHASASALSVSRAQMNVVSENLANANTT 34 >gi|21231399|ref|NP_637316.1| flagellar basal body rod protein FlgC [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66768548|ref|YP_243310.1| flagellar basal body rod protein FlgC [Xanthomonas campestris pv. campestris str. 8004] gi|21113065|gb|AAM41240.1| flagellar biosynthesis, cell-proximal portion of basal-body rod [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66573880|gb|AAY49290.1| flagellar biosynthesis, cell-proximal portion of basal-body rod [Xanthomonas campestris pv. campestris str. 8004] Length = 135 Score = 44.5 bits (103), Expect = 0.013, Method: Composition-based stats. Identities = 5/43 (11%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ + + + +M MI ++ + + +++ ++ L + Sbjct: 90 GYVFSPDVDPVSQMVNMISASRNYQAGVEMLNTAKELALATLT 132 >gi|332284016|ref|YP_004415927.1| flagellar basal body rod protein FlgB [Pusillimonas sp. T7-7] gi|330427969|gb|AEC19303.1| flagellar basal body rod protein FlgB [Pusillimonas sp. T7-7] Length = 137 Score = 44.5 bits (103), Expect = 0.013, Method: Composition-based stats. Identities = 8/46 (17%), Positives = 18/46 (39%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK 55 A ++R +A N++N DT ++ F+ + + Sbjct: 14 TALALRQKRQEVLAANIANADTPNYKARDFDFTAALNQAMDGGGSM 59 >gi|322806996|emb|CBZ04566.1| flagellar basal-body rod protein FlgC [Clostridium botulinum H04402 065] Length = 77 Score = 44.5 bits (103), Expect = 0.013, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 20/50 (40%), Gaps = 9/50 (18%) Query: 1 MQTSFNI---GLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKF 41 M +F+ + A R+ T+A N++N T G ++ F Sbjct: 1 MIKAFDTMRISASGLSAERLRMDTIASNIANATTTRTENGGPYKRKIAVF 50 >gi|197120116|ref|YP_002140543.1| flagellar hook-associated protein FlgK [Geobacter bemidjiensis Bem] gi|197089476|gb|ACH40747.1| flagellar hook-associated protein FlgK [Geobacter bemidjiensis Bem] Length = 482 Score = 44.5 bits (103), Expect = 0.013, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 33/102 (32%), Gaps = 2/102 (1%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--IDQKISFVASG 62 F+I + A + +N++N +T G+ +V N + + A Sbjct: 7 FDIASSGVTAQRLAIEVTGENIANVNTDGYSRQQVIMENKPVTTANGFPLGTGVQIGAVQ 66 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDG 104 + Y + ++ + L P LT DG Sbjct: 67 RTYDNMLQLQQVNGNSSYQENLAKQTALEQIQPSFNELTSDG 108 Score = 40.6 bits (93), Expect = 0.17, Method: Composition-based stats. Identities = 20/146 (13%), Positives = 37/146 (25%), Gaps = 11/146 (7%) Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162 G G + L V +P G + +A +G S Sbjct: 334 TGNNFFNPAGLTAGSIALDGALTGTKVAAALPVVPTDPIPTSSGNNLNALQFVA-LGNQS 392 Query: 163 VDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGF--------LEDSN--ANSMYEMGQ 212 V + G N+ S + + +G L SN + E+ Sbjct: 393 VPFTTGNASFVNNYNSLVSQVGVDTEGTQNVASQGASFLKQLSALRSSNSEVSLDEELTN 452 Query: 213 MIHLTQKFNSITTLIDENEKSMLEAI 238 + + F +I + + Sbjct: 453 LTKYQRAFQGSAKVISAATDMLDTVL 478 >gi|116872099|ref|YP_848880.1| flagellar basal body rod protein FlgB [Listeria welshimeri serovar 6b str. SLCC5334] gi|116740977|emb|CAK20097.1| flagellar basal-body rod protein FlgB [Listeria welshimeri serovar 6b str. SLCC5334] Length = 133 Score = 44.5 bits (103), Expect = 0.013, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 18/42 (42%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 L+ V++N++N +T F+ + F E G+ Sbjct: 12 LNYLQTANQVVSNNIANANTPNFKASEASFEESFGSSLRASG 53 >gi|218887373|ref|YP_002436694.1| flagellar basal body rod protein FlgB [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758327|gb|ACL09226.1| flagellar basal-body rod protein FlgB [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 136 Score = 44.5 bits (103), Expect = 0.013, Method: Composition-based stats. Identities = 10/68 (14%), Positives = 24/68 (35%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 QR + V N++N T G++ +++F + + + + S+ Sbjct: 16 MDMQLQRQNVVMSNIANVRTPGYKPRELEFEKQLQSALGLDAKGRMTRTEQNHLPSEFSA 75 Query: 72 SFISTGTE 79 + E Sbjct: 76 DGFNADWE 83 >gi|30248328|ref|NP_840398.1| flagella basal body rod protein [Nitrosomonas europaea ATCC 19718] gi|30138214|emb|CAD84222.1| Flagella basal body rod protein [Nitrosomonas europaea ATCC 19718] Length = 466 Score = 44.5 bits (103), Expect = 0.013, Method: Composition-based stats. Identities = 16/127 (12%), Positives = 33/127 (25%), Gaps = 2/127 (1%) Query: 1 MQTS-FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFV 59 M N+G++ A + L T + N+SN T G+ + + N V Sbjct: 1 MANGIMNVGVSGLRAAQVALLTTSHNISNATTPGYNRQQAI-QSASTPLANSDGFIGRGV 59 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119 + + + D+ + +L + +A Sbjct: 60 QITTVQRIYNQHLVSQSLQAQSQSSQLDSHYNEIKQIDNLLADTTSGLTPALHNFFNAVQ 119 Query: 120 KYPVLDM 126 Sbjct: 120 DVASNPA 126 >gi|320538492|ref|ZP_08038355.1| flagellar hook-associated protein FlgK [Treponema phagedenis F0421] gi|320144663|gb|EFW36416.1| flagellar hook-associated protein FlgK [Treponema phagedenis F0421] Length = 625 Score = 44.5 bits (103), Expect = 0.013, Method: Composition-based stats. Identities = 7/41 (17%), Positives = 14/41 (34%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E+ +I +N+ I + + I + Sbjct: 584 SGVNIDEELSDIIKFQHGYNASARFIATVNEMLDTIINRMG 624 Score = 38.7 bits (88), Expect = 0.81, Method: Composition-based stats. Identities = 14/110 (12%), Positives = 31/110 (28%), Gaps = 8/110 (7%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDIDQKISFVA 60 S +G + A +Q + T N++N+ T G+ +V F + + + Sbjct: 6 SIELGKRSLFAHKQSVQTAGHNVANSSTPGYTRQRVNLDAFEPLYRPDLSRAETPGQIGQ 65 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTD 110 LD + G ++ + + Sbjct: 66 GVTIG-----SIVRLRDELLDQRIVGQSYDYGYWNTRDPYVQLLEQVYNE 110 >gi|253702425|ref|YP_003023614.1| flagellar hook-associated protein FlgK [Geobacter sp. M21] gi|251777275|gb|ACT19856.1| flagellar hook-associated protein FlgK [Geobacter sp. M21] Length = 480 Score = 44.5 bits (103), Expect = 0.013, Method: Composition-based stats. Identities = 16/102 (15%), Positives = 33/102 (32%), Gaps = 2/102 (1%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--IDQKISFVASG 62 F+I + A + +N++N +T G+ +V N + + A Sbjct: 7 FDIASSGVTAQRLAIEVTGENIANVNTEGYSRQQVIMETKPVTTANGFPLGTGVQIAAVQ 66 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDG 104 + Y + ++ + L P +T DG Sbjct: 67 RTYDNMLQLQMVNGNSSYQENLAKQTALEQIQPSFNEVTADG 108 Score = 39.9 bits (91), Expect = 0.31, Method: Composition-based stats. Identities = 12/122 (9%), Positives = 29/122 (23%), Gaps = 4/122 (3%) Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENS 175 + +G ++ +P N + + + T V+ V + Sbjct: 354 TLTGVKVAAALSVPTDPVPSSGNNLNALQLAALGNQSVPFTTGNASFVNNYNSLVSQVGV 413 Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSN--ANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 + L SN + E+ + + F +I Sbjct: 414 DTEGTQNVAGQGASFLKQL--NALRSSNSEVSLDEELTNLTKYQRAFQGSAKVISAATDM 471 Query: 234 ML 235 + Sbjct: 472 LD 473 >gi|123442787|ref|YP_001006764.1| flagellar basal body rod protein FlgB [Yersinia enterocolitica subsp. enterocolitica 8081] gi|332161319|ref|YP_004297896.1| flagellar basal body rod protein FlgB [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|2494519|sp|Q56893|FLGB_YEREN RecName: Full=Flagellar basal-body rod protein flgB gi|793898|emb|CAA88192.1| flgB [Yersinia enterocolitica] gi|122089748|emb|CAL12601.1| flagellar basal-body rod protein FlgB [Yersinia enterocolitica subsp. enterocolitica 8081] gi|318605239|emb|CBY26737.1| flagellar basal-body rod protein FlgB [Yersinia enterocolitica subsp. palearctica Y11] gi|325665549|gb|ADZ42193.1| flagellar basal body rod protein FlgB [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 137 Score = 44.5 bits (103), Expect = 0.013, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 24/65 (36%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR ++ N++N DT GF+ + FS + + + V+ Sbjct: 15 ALNLRAQRQEILSSNIANADTPGFQARDIDFSSQLKKVMEQGRASGTGVSLSLTSARHIP 74 Query: 71 GSFIS 75 S + Sbjct: 75 ASTVQ 79 >gi|298530645|ref|ZP_07018047.1| flagellar basal-body rod protein FlgC [Desulfonatronospira thiodismutans ASO3-1] gi|298510019|gb|EFI33923.1| flagellar basal-body rod protein FlgC [Desulfonatronospira thiodismutans ASO3-1] Length = 146 Score = 44.5 bits (103), Expect = 0.013, Method: Composition-based stats. Identities = 9/31 (29%), Positives = 17/31 (54%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32 S +IG +A A L+ ++ N++N +T Sbjct: 4 MKSLDIGASALSAERTHLNVISMNLANANTT 34 Score = 44.5 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 6/44 (13%), Positives = 21/44 (47%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 + G+++ + N + EM M+ + + + + + + +A+ Sbjct: 98 QEGYVKTPDINVVEEMANMLTAMRTYEANVSAVTNTKNMFNKAL 141 >gi|28869137|ref|NP_791756.1| flagellar basal-body rod protein FlgB [Pseudomonas syringae pv. tomato str. DC3000] gi|213967585|ref|ZP_03395733.1| flagellar basal-body rod protein FlgB [Pseudomonas syringae pv. tomato T1] gi|237799203|ref|ZP_04587664.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv. oryzae str. 1_6] gi|237806222|ref|ZP_04592926.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv. oryzae str. 1_6] gi|301385710|ref|ZP_07234128.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv. tomato Max13] gi|302060078|ref|ZP_07251619.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv. tomato K40] gi|302134837|ref|ZP_07260827.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28852377|gb|AAO55451.1| flagellar basal-body rod protein FlgB [Pseudomonas syringae pv. tomato str. DC3000] gi|213927886|gb|EEB61433.1| flagellar basal-body rod protein FlgB [Pseudomonas syringae pv. tomato T1] gi|331017029|gb|EGH97085.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv. lachrymans str. M302278PT] gi|331022058|gb|EGI02115.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv. oryzae str. 1_6] gi|331027335|gb|EGI07390.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv. oryzae str. 1_6] Length = 135 Score = 44.5 bits (103), Expect = 0.013, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 38/113 (33%), Gaps = 3/113 (2%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + I A QR +A+N+SN DT F+ ++FS V+ A +ND Q F + Sbjct: 6 DKALGIHEKALNFRAQRAEVLANNISNADTPNFKARDLEFSSVLAA-ENDKAQNGHFALN 64 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSL 114 E + L + + + T + G Sbjct: 65 KTNSRHIEAEGMGNDDGTLMYRTPSQPSLDQNTVDSQVET--ASYTENAMGFQ 115 >gi|238785491|ref|ZP_04629474.1| hypothetical protein yberc0001_18240 [Yersinia bercovieri ATCC 43970] gi|238713593|gb|EEQ05622.1| hypothetical protein yberc0001_18240 [Yersinia bercovieri ATCC 43970] Length = 549 Score = 44.5 bits (103), Expect = 0.013, Method: Composition-based stats. Identities = 10/39 (25%), Positives = 20/39 (51%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 N ++ A + LSTV++N++N G+ F++ Sbjct: 1 MNTAMSGLSAAQYALSTVSNNITNFQVAGYNRQNAIFAQ 39 >gi|148546703|ref|YP_001266805.1| flagellar basal body rod protein FlgB [Pseudomonas putida F1] gi|148510761|gb|ABQ77621.1| flagellar basal-body rod protein FlgB [Pseudomonas putida F1] gi|313497758|gb|ADR59124.1| FlgB [Pseudomonas putida BIRD-1] Length = 136 Score = 44.5 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 26/64 (40%) Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76 QR +A+N++N DT ++ + FS V+ A + + + G I+ Sbjct: 21 QRAEVLANNIANADTPNYKARDMDFSSVLAAETSKQQGGRFAMDRTNSRHIEAEGLAIAA 80 Query: 77 GTEL 80 L Sbjct: 81 DDTL 84 >gi|91976147|ref|YP_568806.1| flagellar hook-associated protein [Rhodopseudomonas palustris BisB5] gi|91682603|gb|ABE38905.1| Flagellar hook-associated protein [Rhodopseudomonas palustris BisB5] Length = 623 Score = 44.5 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 34/92 (36%), Gaps = 3/92 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + +I +A A + +S V+ N++N +T G+ V + + +S + + Sbjct: 6 ALSIAMAGLRANQASMSLVSSNVANAETPGYVRKTV---DQITTTAGPSGSGVSIIGVNR 62 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESP 95 E + + + +AL + Sbjct: 63 ELDAYLQSQLRTETSGASYALLRSDFLKQLQG 94 Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 10/73 (13%), Positives = 28/73 (38%) Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 Q FV ++ S + + T+++ + S N EM ++ L +++ + Sbjct: 549 QQFVGQQGSDALAASQLAEGQSVVLNTLQQKYSTSSGVNMDEEMAHLLSLQNAYSANARV 608 Query: 227 IDENEKSMLEAIR 239 + + ++ Sbjct: 609 MSTVNQMYQALMQ 621 >gi|254993619|ref|ZP_05275809.1| flagellar basal body rod protein FlgC [Listeria monocytogenes FSL J2-064] Length = 136 Score = 44.5 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 9/40 (22%), Positives = 21/40 (52%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 G++ +N + EM ++ + + + T+ + NEK M + Sbjct: 90 GYVNYANVDMTAEMTNLMVXQKMYAANTSALQANEKMMEK 129 Score = 38.7 bits (88), Expect = 0.67, Method: Composition-based stats. Identities = 8/30 (26%), Positives = 15/30 (50%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTD 30 M N +A A +Q + ++N++N D Sbjct: 1 MFEGINTSGSALNAAKQWMEVSSNNIANAD 30 >gi|170741834|ref|YP_001770489.1| flagellar basal body rod protein FlgC [Methylobacterium sp. 4-46] gi|168196108|gb|ACA18055.1| flagellar basal-body rod protein FlgC [Methylobacterium sp. 4-46] Length = 138 Score = 44.5 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 16/42 (38%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 N N + EM M + + + +I + + I + S Sbjct: 97 PNVNVLIEMTDMREANRSYEANLQMIKQARALVASVIDLLKS 138 Score = 39.5 bits (90), Expect = 0.39, Method: Composition-based stats. Identities = 10/100 (10%), Positives = 24/100 (24%), Gaps = 8/100 (8%) Query: 8 GLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQKISFVA 60 A RL VA+N++N + G ++ + F + + + Sbjct: 12 ASAGMEVQSLRLRVVAENIANAQSTGVDPGSDPYQRKTITFRSELDRAAGAATVGVREIG 71 Query: 61 -SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 + + + D + Sbjct: 72 VDRAPFRVEHEPGNPAADENGDVKYPNVNVLIEMTDMREA 111 >gi|92114101|ref|YP_574029.1| flagellar basal-body rod protein FlgB [Chromohalobacter salexigens DSM 3043] gi|91797191|gb|ABE59330.1| flagellar basal-body rod protein FlgB [Chromohalobacter salexigens DSM 3043] Length = 139 Score = 44.5 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 10/65 (15%), Positives = 20/65 (30%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTG 77 R +A+N++N DT ++ FS + + ++ G Sbjct: 22 RQKVLANNIANADTPNYKARDFDFSAELDRAMQSGGGREGGLSLATTSARHIPAQAPGGG 81 Query: 78 TELDF 82 D Sbjct: 82 GVHDL 86 >gi|330860609|emb|CBX70906.1| flagellar basal-body rod protein flgB [Yersinia enterocolitica W22703] Length = 96 Score = 44.5 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 12/64 (18%), Positives = 23/64 (35%), Gaps = 2/64 (3%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 A R ++ N++N DT GF+ + FS + + + V+ Sbjct: 1 MRAQ--RQEILSSNIANADTPGFQARDIDFSSQLKKVMEQGRASGTGVSLSLTSARHIPA 58 Query: 72 SFIS 75 S + Sbjct: 59 STVQ 62 >gi|317052364|ref|YP_004113480.1| flagellar basal-body rod protein FlgB [Desulfurispirillum indicum S5] gi|316947448|gb|ADU66924.1| flagellar basal-body rod protein FlgB [Desulfurispirillum indicum S5] Length = 141 Score = 44.5 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 6/72 (8%), Positives = 22/72 (30%) Query: 9 LAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSK 68 + + +A N++N +T ++ ++ F + + + + + + S Sbjct: 16 ATSMTVRSKNQDVIATNVANAETPNYKAKELVFEDQLREAVLGRKEDKEMIPMARTHESH 75 Query: 69 EVGSFISTGTEL 80 Sbjct: 76 LPTGAKPAFMPY 87 >gi|300024587|ref|YP_003757198.1| flagellar hook-associated protein FlgK [Hyphomicrobium denitrificans ATCC 51888] gi|299526408|gb|ADJ24877.1| flagellar hook-associated protein FlgK [Hyphomicrobium denitrificans ATCC 51888] Length = 487 Score = 44.5 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 8/38 (21%), Positives = 19/38 (50%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 N EM ++ L + F + + LI+ + + I+++ Sbjct: 449 VNLDEEMTNLLDLERTFQASSRLINTVNEMLSTLIQSL 486 >gi|187478191|ref|YP_786215.1| flagellar hook-associated protein FlgK [Bordetella avium 197N] gi|115422777|emb|CAJ49305.1| flagellar hook-associated protein 1 [Bordetella avium 197N] Length = 550 Score = 44.5 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 24/181 (13%), Positives = 45/181 (24%), Gaps = 3/181 (1%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 +N+ L A + LS + N++N T G+ +V S + + Sbjct: 1 MNLYNLALTGLNASQAGLSVTSHNINNAATDGYSRQRVVTSTAGASATSQGYFGRGVQVD 60 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 + G A + + + R G S + Sbjct: 61 TVKRQFDGFLYKQLVGASGSAAQLSTQLDQMTAVNNLFADRTVGVSAALSGMFSSLNSAA 120 Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV---IATMGLYSVDMSQGFVRRENSGIS 178 +V + K G Q + T +V ++ R N Sbjct: 121 SAPADPAVRQDLTGKTNSLVAQINGAYQQLQNQRDGLNTQISTTVTQVNSYLERINDLNQ 180 Query: 179 P 179 Sbjct: 181 Q 181 >gi|238788312|ref|ZP_04632106.1| Flagellar basal-body rod protein flgB [Yersinia frederiksenii ATCC 33641] gi|238723558|gb|EEQ15204.1| Flagellar basal-body rod protein flgB [Yersinia frederiksenii ATCC 33641] Length = 137 Score = 44.5 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 24/65 (36%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR ++ N++N DT GF+ + FS + + + V+ Sbjct: 15 ALNLRAQRQEILSSNIANADTPGFQARDIDFSSQLKKVMEQGRVNGTGVSLSLTSARHIP 74 Query: 71 GSFIS 75 S + Sbjct: 75 ASTVQ 79 >gi|254496884|ref|ZP_05109732.1| flagellar basal body rod protein FlgB [Legionella drancourtii LLAP12] gi|254353903|gb|EET12590.1| flagellar basal body rod protein FlgB [Legionella drancourtii LLAP12] Length = 130 Score = 44.5 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 40/87 (45%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + F I A + +QR S +A+N++N +T ++ V F++++ A Q++ + Sbjct: 6 DSYFGIHAKALIGRDQRSSQLANNIANANTPRYKAQDVDFNDLLAAQMAGSSQQLETTSP 65 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDA 88 + + + + +L+G+ Sbjct: 66 NHISSTGDFNANLKYRVTAQMSLDGNT 92 >gi|123442778|ref|YP_001006755.1| flagellar hook-associated protein FlgK [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122089739|emb|CAL12592.1| flagellar hook-associated protein 1 [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 554 Score = 44.5 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 1/44 (2%) Query: 1 MQTSF-NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 M S N ++ A + LSTV++N++N G+ F++ Sbjct: 1 MSNSLMNTAMSGLSAAQYALSTVSNNITNFQVAGYNRQNTIFAQ 44 >gi|58582193|ref|YP_201209.1| flagellar basal body rod protein FlgC [Xanthomonas oryzae pv. oryzae KACC10331] gi|58426787|gb|AAW75824.1| flagellar biosynthesis cell-proximal portion of basal-body rod [Xanthomonas oryzae pv. oryzae KACC10331] Length = 127 Score = 44.5 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 5/43 (11%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ + + + +M MI ++ + + +++ ++ L + Sbjct: 82 GYVFSPDVDPVSQMVNMISASRNYQAGVEMLNTAKELALATLT 124 >gi|146281768|ref|YP_001171921.1| flagellar basal body rod protein FlgB [Pseudomonas stutzeri A1501] gi|145569973|gb|ABP79079.1| flagellar basal-body rod protein FlgB [Pseudomonas stutzeri A1501] Length = 134 Score = 44.5 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 9/38 (23%), Positives = 17/38 (44%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 QR +A+N++N DT ++ + F V+ Sbjct: 20 SQRAEVLANNIANADTPNYKARDLDFGSVLAEQSAQGQ 57 >gi|291539399|emb|CBL12510.1| flagellar hook-associated protein FlgK [Roseburia intestinalis XB6B4] Length = 613 Score = 44.5 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 10/37 (27%), Positives = 17/37 (45%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 I + A + L+T A+N+SN T G+ + Sbjct: 7 GLTIASSGLSAYQVALNTSANNISNVQTKGYSKQQAN 43 >gi|289679032|ref|ZP_06499922.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv. syringae FF5] gi|302185586|ref|ZP_07262259.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv. syringae 642] gi|330899398|gb|EGH30817.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv. japonica str. M301072PT] gi|330943204|gb|EGH45611.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv. pisi str. 1704B] gi|330975973|gb|EGH76039.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 135 Score = 44.5 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 30/80 (37%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + I A QR +A+N+SN DT F+ ++FS V+ A + + Sbjct: 6 DKALGIHEKALNFRAQRAEVLANNISNADTPNFKARDLEFSSVLAAETDKAQNGHFALNK 65 Query: 62 GKEYLSKEVGSFISTGTELD 81 + G GT + Sbjct: 66 TNSRHIEAEGMGNDDGTLMY 85 >gi|253996313|ref|YP_003048377.1| flagellar hook-associated protein FlgK [Methylotenera mobilis JLW8] gi|253982992|gb|ACT47850.1| flagellar hook-associated protein FlgK [Methylotenera mobilis JLW8] Length = 657 Score = 44.5 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 21/191 (10%), Positives = 41/191 (21%), Gaps = 1/191 (0%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 NIG +A A + +ST N++N T G+ V + Sbjct: 4 NILNIGKSALAAAQVGISTTGHNIANASTPGYSRQVVVQAAAQSQNF-GYGFVGQGTEIA 62 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 + + + + + +L+ A K Sbjct: 63 SVTRIFNDILAAQAVRSQSNSSSANTYLSQMTSINDMLSNSTAGLNPAMSDFFGAVQKLS 122 Query: 123 VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIP 182 Q + + I + S G V I+ Sbjct: 123 ANPSDIPTRQSMLSYAQSLASRFQTTNNRLNEIRDSVNTQLTSSVGLVNTYAKQIASLND 182 Query: 183 PTPLEDLSGVT 193 + + Sbjct: 183 VIEKSISANGS 193 Score = 39.1 bits (89), Expect = 0.61, Method: Composition-based stats. Identities = 24/221 (10%), Positives = 56/221 (25%), Gaps = 12/221 (5%) Query: 23 ADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDF 82 + N++NT T + + + + + + ++ + Sbjct: 449 SANVANTGT----------ASISSPAADSTYASSPIASPFNITYNAGAPNTLTGFIATEP 498 Query: 83 ALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNV 142 ++ G +T ++ G + SG D +V Sbjct: 499 VTVTSNGTSVTYAAGAPVTFVNGATISTAGMSFTISGTPNNGDQFTVTPNSVTGPGDNTN 558 Query: 143 GEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDS 202 G Q I YS Q V + + E + +S Sbjct: 559 GLLLAKLQNADTITGNKSYSDAFGQ-MVNGVGNKTRELGILSVSEGQVLEQINASVQAES 617 Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 N E +I Q + + ++ + + + + Sbjct: 618 GVNLDEEATNLIRYQQAYQAAGKMMQIASQLFDVLL-QLGT 657 >gi|15594639|ref|NP_212428.1| flagellar basal body rod protein FlgB [Borrelia burgdorferi B31] gi|223888689|ref|ZP_03623280.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi 64b] gi|1706829|sp|P52608|FLGB_BORBU RecName: Full=Flagellar basal-body rod protein flgB gi|1165278|gb|AAA85617.1| FlgB [Borrelia burgdorferi] gi|2688172|gb|AAC66654.1| flagellar basal-body rod protein (flgB) [Borrelia burgdorferi B31] gi|223885505|gb|EEF56604.1| flagellar basal-body rod protein FlgB [Borrelia burgdorferi 64b] Length = 135 Score = 44.5 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 11/32 (34%), Positives = 17/32 (53%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 L R S ++DN++N DT F+ K+ F Sbjct: 15 LDVLSLRQSVISDNIANIDTPNFKRSKISFES 46 >gi|332294890|ref|YP_004436813.1| flagellar basal-body rod protein FlgB [Thermodesulfobium narugense DSM 14796] gi|332177993|gb|AEE13682.1| flagellar basal-body rod protein FlgB [Thermodesulfobium narugense DSM 14796] Length = 134 Score = 44.5 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 10/65 (15%), Positives = 23/65 (35%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 +R +A N++N DT G+++ + F + + I + ++S Sbjct: 14 GLSGAYKRNEVLAQNIANADTPGYKSYDINFMSELKKALEEDQDNIPLKRTNPLHMSDTP 73 Query: 71 GSFIS 75 Sbjct: 74 NLNKD 78 >gi|323492340|ref|ZP_08097493.1| flagellar basal body rod protein FlgC [Vibrio brasiliensis LMG 20546] gi|323313387|gb|EGA66498.1| flagellar basal body rod protein FlgC [Vibrio brasiliensis LMG 20546] Length = 144 Score = 44.5 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 6/42 (14%), Positives = 18/42 (42%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ + + + EM M+ T+ F + ++ + + Sbjct: 97 GYVYYPDVDVVSEMADMMSATRSFETNVEVLTNVKSMQQGLL 138 Score = 38.3 bits (87), Expect = 0.92, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 6/49 (12%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIK 49 I +A A RL+TVA N++N D V ++ +K F+ V + Sbjct: 9 IAGSAMNAQTVRLNTVASNLANADAVSANPDDAYKALKPVFATVYNKTQ 57 >gi|209545549|ref|YP_002277778.1| flagellar basal body rod protein FlgC [Gluconacetobacter diazotrophicus PAl 5] gi|209533226|gb|ACI53163.1| flagellar basal-body rod protein FlgC [Gluconacetobacter diazotrophicus PAl 5] Length = 135 Score = 44.5 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 25/77 (32%), Gaps = 7/77 (9%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQKISFV 59 + A A E+RL A+N++N DT G +R + F + K+ + Sbjct: 9 VSAAGMRAQEERLRVAAENLANKDTTGSTRGADPYRRKTITFQATLDQASGVSSVKVKGI 68 Query: 60 ASGKEYLSKEVGSFIST 76 + Sbjct: 69 GQDNTPFQTKYDPSHPA 85 Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 8/45 (17%), Positives = 16/45 (35%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 G+++ N NSM E+ + + + + I I Sbjct: 90 GYVKMPNVNSMVEIMDTHEAQHSYEANLNTMQISRSMATRTINLI 134 >gi|238785500|ref|ZP_04629483.1| Flagellar basal-body rod protein flgB [Yersinia bercovieri ATCC 43970] gi|238713602|gb|EEQ05631.1| Flagellar basal-body rod protein flgB [Yersinia bercovieri ATCC 43970] Length = 137 Score = 44.5 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 24/65 (36%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR ++ N++N DT GF+ + FS + + + V+ Sbjct: 15 ALNLRAQRQEILSSNIANADTPGFQARDIDFSSQLKKVVEQGRVSGTGVSLSLTSARHIP 74 Query: 71 GSFIS 75 S + Sbjct: 75 ASTVQ 79 >gi|255099412|ref|ZP_05328389.1| flagellar basal-body rod protein [Clostridium difficile QCD-63q42] Length = 105 Score = 44.5 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 19/35 (54%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV 45 A R T+A+N++N +T G++ V F E + Sbjct: 10 GLDATNLRSQTIANNIANINTEGYKRHYVTFEETL 44 >gi|149184204|ref|ZP_01862522.1| flagellar proximal rod protein [Erythrobacter sp. SD-21] gi|148831524|gb|EDL49957.1| flagellar proximal rod protein [Erythrobacter sp. SD-21] Length = 115 Score = 44.5 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 28/77 (36%), Gaps = 1/77 (1%) Query: 1 MQTSFN-IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFV 59 M I AA QRL + N++N T G++ + F+ + A + + Sbjct: 1 MSEGLFGIHGAALEIRSQRLGVLGSNIANAATPGYKARDIDFAAALDARLEGAEASGATT 60 Query: 60 ASGKEYLSKEVGSFIST 76 + K + +T Sbjct: 61 GAIKYRVPTMASLDGNT 77 >gi|303248233|ref|ZP_07334496.1| flagellar hook-associated protein FlgK [Desulfovibrio fructosovorans JJ] gi|302490371|gb|EFL50282.1| flagellar hook-associated protein FlgK [Desulfovibrio fructosovorans JJ] Length = 696 Score = 44.5 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 11/73 (15%), Positives = 20/73 (27%) Query: 8 GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLS 67 G + A + L +N++N DT G+ V + + VA Sbjct: 11 GRSGLTASQAALQVTGNNIANVDTEGYSKQSVVLVDGNYITSSPGQLGSGVVAQEVVRSY 70 Query: 68 KEVGSFISTGTEL 80 + Sbjct: 71 DALTQSQYLSQIS 83 Score = 40.6 bits (93), Expect = 0.20, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 12/37 (32%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S + E+ +I + + LI + + Sbjct: 656 SGVSLDEELTNLIKFQHAYQAAAKLISTADSLFQTVL 692 >gi|241204820|ref|YP_002975916.1| hypothetical protein Rleg_2100 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858710|gb|ACS56377.1| protein of unknown function DUF1078 domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 101 Score = 44.5 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 20/40 (50%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46 L+ A R+S +A+N++NT T + + + VV Sbjct: 9 TALSGMRAQATRVSAIANNIANTSTPDYARLNTSLTSVVS 48 >gi|332161328|ref|YP_004297905.1| flagellar hook-associated protein FlgK [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318605248|emb|CBY26746.1| flagellar hook-associated protein FlgK [Yersinia enterocolitica subsp. palearctica Y11] gi|325665558|gb|ADZ42202.1| flagellar hook-associated protein FlgK [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330861098|emb|CBX71365.1| flagellar hook-associated protein 1 [Yersinia enterocolitica W22703] Length = 554 Score = 44.5 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 1/44 (2%) Query: 1 MQTSF-NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 M S N ++ A + LSTV++N++N G+ F++ Sbjct: 1 MSNSLMNTAMSGLSAAQYALSTVSNNITNFQVAGYNRQNTIFAQ 44 >gi|315186992|gb|EFU20749.1| flagellar hook-associated protein FlgK [Spirochaeta thermophila DSM 6578] Length = 624 Score = 44.5 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 14/41 (34%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E+ QMI + + I + I +A Sbjct: 583 SGVNIDEELAQMIKFQHGYAASARFISTFNSMLDLLINRMA 623 Score = 42.5 bits (98), Expect = 0.045, Method: Composition-based stats. Identities = 16/41 (39%), Positives = 20/41 (48%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44 S IG LA Q L+TV NMSN G+ +V F + Sbjct: 7 SIEIGKRGLLAHTQGLATVGHNMSNASVEGYSRQRVNFEAM 47 >gi|291562032|emb|CBL40848.1| flagellar basal-body rod protein FlgC [butyrate-producing bacterium SS3/4] Length = 149 Score = 44.5 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 6/42 (14%), Positives = 19/42 (45%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N + + E + T+ + + T ++ + +A+ Sbjct: 104 GYVTMPNVDVLKETVDSMSATRSYEANVTALNAIKLMAQKAL 145 Score = 43.7 bits (101), Expect = 0.024, Method: Composition-based stats. Identities = 10/29 (34%), Positives = 16/29 (55%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTV 32 SF+I + A R+ A+N++N DT Sbjct: 6 SFDISASGMSAQRVRMDIAAENIANMDTT 34 >gi|190891944|ref|YP_001978486.1| flagellar basal body rod protein [Rhizobium etli CIAT 652] gi|190697223|gb|ACE91308.1| probable flagellar basal body rod protein [Rhizobium etli CIAT 652] Length = 100 Score = 44.5 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 10/29 (34%), Positives = 18/29 (62%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGF 34 NI L+ A R+ +A+N++N+ T G+ Sbjct: 8 NIALSGMRAQATRIGAIANNVANSSTSGY 36 Score = 37.5 bits (85), Expect = 1.8, Method: Composition-based stats. Identities = 5/33 (15%), Positives = 13/33 (39%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 S+ + E+ +MI Q + + + + Sbjct: 58 TSDVDPATELTEMIEAEQAYKANAAVFETGADM 90 >gi|238793995|ref|ZP_04637613.1| Flagellar basal-body rod protein flgB [Yersinia intermedia ATCC 29909] gi|238726627|gb|EEQ18163.1| Flagellar basal-body rod protein flgB [Yersinia intermedia ATCC 29909] Length = 137 Score = 44.5 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 24/65 (36%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR ++ N++N DT GF+ + FS + + + V+ Sbjct: 15 ALNLRAQRQEILSSNIANADTPGFQARDIDFSSQLKKVMEQGRANGTGVSLSLTSARHIP 74 Query: 71 GSFIS 75 S + Sbjct: 75 ASTVQ 79 >gi|258404782|ref|YP_003197524.1| flagellar basal-body rod protein FlgC [Desulfohalobium retbaense DSM 5692] gi|257797009|gb|ACV67946.1| flagellar basal-body rod protein FlgC [Desulfohalobium retbaense DSM 5692] Length = 142 Score = 44.5 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 23/42 (54%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ + N + EM ++ T+ + + T I +++ ++A+ Sbjct: 97 GYVTMPDINVLEEMTDIMAATRAYEANVTSIKASQRMAVKAL 138 Score = 37.5 bits (85), Expect = 1.8, Method: Composition-based stats. Identities = 8/29 (27%), Positives = 17/29 (58%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTV 32 + +I +A A R++ + N++NT+T Sbjct: 6 AMDISASAMTAQSLRMNAASSNLANTETT 34 >gi|22126393|ref|NP_669816.1| flagellar basal body rod protein FlgB [Yersinia pestis KIM 10] gi|45441412|ref|NP_992951.1| flagellar basal body rod protein FlgB [Yersinia pestis biovar Microtus str. 91001] gi|51596008|ref|YP_070199.1| flagellar basal body rod protein FlgB [Yersinia pseudotuberculosis IP 32953] gi|108807170|ref|YP_651086.1| flagellar basal body rod protein FlgB [Yersinia pestis Antiqua] gi|108812486|ref|YP_648253.1| flagellar basal body rod protein FlgB [Yersinia pestis Nepal516] gi|145598613|ref|YP_001162689.1| flagellar basal body rod protein FlgB [Yersinia pestis Pestoides F] gi|149366254|ref|ZP_01888289.1| flagellar basal-body rod protein FlgB [Yersinia pestis CA88-4125] gi|153947522|ref|YP_001401293.1| flagellar basal body rod protein FlgB [Yersinia pseudotuberculosis IP 31758] gi|162419951|ref|YP_001606470.1| flagellar basal body rod protein FlgB [Yersinia pestis Angola] gi|165925964|ref|ZP_02221796.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar Orientalis str. F1991016] gi|165938769|ref|ZP_02227324.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar Orientalis str. IP275] gi|166010954|ref|ZP_02231852.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar Antiqua str. E1979001] gi|166211185|ref|ZP_02237220.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar Antiqua str. B42003004] gi|167401128|ref|ZP_02306631.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167420101|ref|ZP_02311854.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425829|ref|ZP_02317582.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167469717|ref|ZP_02334421.1| flagellar basal-body rod protein FlgB [Yersinia pestis FV-1] gi|170024650|ref|YP_001721155.1| flagellar basal body rod protein FlgB [Yersinia pseudotuberculosis YPIII] gi|186895111|ref|YP_001872223.1| flagellar basal body rod protein FlgB [Yersinia pseudotuberculosis PB1/+] gi|218928919|ref|YP_002346794.1| flagellar basal body rod protein FlgB [Yersinia pestis CO92] gi|229896239|ref|ZP_04511409.1| flagellar basal-body rod protein FlgB [Yersinia pestis Pestoides A] gi|229897174|ref|ZP_04512330.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar Orientalis str. PEXU2] gi|229897900|ref|ZP_04513051.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar Orientalis str. India 195] gi|229902868|ref|ZP_04517985.1| flagellar basal-body rod protein FlgB [Yersinia pestis Nepal516] gi|270486648|ref|ZP_06203722.1| flagellar basal-body rod protein FlgB [Yersinia pestis KIM D27] gi|294504033|ref|YP_003568095.1| flagellar basal body rod protein [Yersinia pestis Z176003] gi|21959380|gb|AAM86067.1|AE013854_3 cell-proximal portion of basal-body rod protein [Yersinia pestis KIM 10] gi|45436273|gb|AAS61828.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar Microtus str. 91001] gi|51589290|emb|CAH20911.1| flagellar basal-body rod protein FlgB [Yersinia pseudotuberculosis IP 32953] gi|108776134|gb|ABG18653.1| flagellar basal-body rod protein FlgB [Yersinia pestis Nepal516] gi|108779083|gb|ABG13141.1| flagellar basal-body rod protein FlgB [Yersinia pestis Antiqua] gi|115347530|emb|CAL20439.1| flagellar basal-body rod protein FlgB [Yersinia pestis CO92] gi|145210309|gb|ABP39716.1| flagellar basal-body rod protein FlgB [Yersinia pestis Pestoides F] gi|149292667|gb|EDM42741.1| flagellar basal-body rod protein FlgB [Yersinia pestis CA88-4125] gi|152959017|gb|ABS46478.1| flagellar basal-body rod protein FlgB [Yersinia pseudotuberculosis IP 31758] gi|162352766|gb|ABX86714.1| flagellar basal-body rod protein FlgB [Yersinia pestis Angola] gi|165913383|gb|EDR32005.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar Orientalis str. IP275] gi|165922168|gb|EDR39345.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar Orientalis str. F1991016] gi|165990298|gb|EDR42599.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar Antiqua str. E1979001] gi|166208365|gb|EDR52845.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar Antiqua str. B42003004] gi|166961796|gb|EDR57817.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167049517|gb|EDR60925.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167055228|gb|EDR65025.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169751184|gb|ACA68702.1| flagellar basal-body rod protein FlgB [Yersinia pseudotuberculosis YPIII] gi|186698137|gb|ACC88766.1| flagellar basal-body rod protein FlgB [Yersinia pseudotuberculosis PB1/+] gi|229680315|gb|EEO76414.1| flagellar basal-body rod protein FlgB [Yersinia pestis Nepal516] gi|229688941|gb|EEO81006.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar Orientalis str. India 195] gi|229693511|gb|EEO83560.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701162|gb|EEO89191.1| flagellar basal-body rod protein FlgB [Yersinia pestis Pestoides A] gi|262361781|gb|ACY58502.1| flagellar basal body rod protein [Yersinia pestis D106004] gi|262366083|gb|ACY62640.1| flagellar basal body rod protein [Yersinia pestis D182038] gi|270335152|gb|EFA45929.1| flagellar basal-body rod protein FlgB [Yersinia pestis KIM D27] gi|294354492|gb|ADE64833.1| flagellar basal body rod protein [Yersinia pestis Z176003] gi|320015470|gb|ADV99041.1| flagellar basal-body rod protein FlgB [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 137 Score = 44.5 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 24/65 (36%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR ++ N++N DT GF+ + FS + + + V+ Sbjct: 15 ALNLRAQRQEILSSNIANADTPGFQARDIDFSSQLKKVMEQGRANGTGVSLSLTSARHIP 74 Query: 71 GSFIS 75 + + Sbjct: 75 ATTVQ 79 >gi|203287640|ref|YP_002222655.1| flagellar hook-associated protein [Borrelia recurrentis A1] gi|201084860|gb|ACH94434.1| flagellar hook-associated protein [Borrelia recurrentis A1] Length = 627 Score = 44.5 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 17/41 (41%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E+ MI Q F + + I+ + + + I + Sbjct: 586 SGVNKDEELANMIEFQQSFIAASKFINISAELIDTIINKMG 626 >gi|109899404|ref|YP_662659.1| flagellar basal-body rod protein FlgC [Pseudoalteromonas atlantica T6c] gi|109701685|gb|ABG41605.1| flagellar basal-body rod protein FlgC [Pseudoalteromonas atlantica T6c] Length = 140 Score = 44.5 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 20/43 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N + EM M+ ++ + + + D ++ +R Sbjct: 93 GYIYKPNVNIVEEMADMMSASKAYETNVQVADTTKRLFRNVLR 135 Score = 39.5 bits (90), Expect = 0.39, Method: Composition-based stats. Identities = 14/84 (16%), Positives = 27/84 (32%), Gaps = 6/84 (7%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56 +I A RL+T A N++N ++V ++ F+ + D + Sbjct: 5 NVMDIASTGMSAQSVRLNTTASNVANANSVSSSYDQTYKARHPVFAAELQRASQDQNAGT 64 Query: 57 SFVASGKEYLSKEVGSFISTGTEL 80 G + S G + Sbjct: 65 GVQVMGIVESDAPLQIEYSPGHPM 88 >gi|170737036|ref|YP_001778296.1| flagellar basal-body rod protein FlgC [Burkholderia cenocepacia MC0-3] gi|169819224|gb|ACA93806.1| flagellar basal-body rod protein FlgC [Burkholderia cenocepacia MC0-3] Length = 132 Score = 44.1 bits (102), Expect = 0.015, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 22/43 (51%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G + SN +++ EM M+ ++ F++ ++ + + +R Sbjct: 86 GMVFYSNVSAVEEMADMMAASRAFSTNVEVLTRIKGMQQDLLR 128 Score = 42.2 bits (97), Expect = 0.062, Method: Composition-based stats. Identities = 17/79 (21%), Positives = 28/79 (35%), Gaps = 5/79 (6%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVG-----FRTIKVKFSEVVGAIKNDIDQKISFVAS 61 I +A A RL+T+A N++N T G +R K F+ V + Sbjct: 9 IAGSALSAQTVRLNTIASNLANAGTSGTEETAYRARKPVFASVFQNGGARVQVLDVIATD 68 Query: 62 GKEYLSKEVGSFISTGTEL 80 E G ++ + Sbjct: 69 DALAARHEPGHPLADENGM 87 >gi|295110886|emb|CBL27636.1| Flagellar hook-associated protein [Synergistetes bacterium SGP1] Length = 442 Score = 44.1 bits (102), Expect = 0.015, Method: Composition-based stats. Identities = 8/41 (19%), Positives = 17/41 (41%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E+ MI L + F +++ + ++ + I Sbjct: 398 SGVNLDEELMDMITLNRCFGAMSRYVTTVDEMLNAIINGFG 438 >gi|291613035|ref|YP_003523192.1| flagellar basal-body rod protein FlgB [Sideroxydans lithotrophicus ES-1] gi|291583147|gb|ADE10805.1| flagellar basal-body rod protein FlgB [Sideroxydans lithotrophicus ES-1] Length = 134 Score = 44.1 bits (102), Expect = 0.015, Method: Composition-based stats. Identities = 9/56 (16%), Positives = 22/56 (39%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65 A R +A N++N DT ++ + F+ + + +K+ + + Sbjct: 14 TALNLRAARQELIASNIANADTPNYKAKDIDFASALQGALSGSGEKLQVAVTSPLH 69 >gi|261856363|ref|YP_003263646.1| flagellar basal-body rod protein FlgB [Halothiobacillus neapolitanus c2] gi|261836832|gb|ACX96599.1| flagellar basal-body rod protein FlgB [Halothiobacillus neapolitanus c2] Length = 132 Score = 44.1 bits (102), Expect = 0.015, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 22/54 (40%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 A + QR+ +A N++N DT F+ + F + + A + + Sbjct: 12 ALVFQSQRMGILASNIANADTPNFKARDLSFHDALQAAAGQGSAGQPLALAHNQ 65 >gi|158422260|ref|YP_001523552.1| flagellar basal body rod protein FlgC [Azorhizobium caulinodans ORS 571] gi|158329149|dbj|BAF86634.1| flagellar basal-body rod protein [Azorhizobium caulinodans ORS 571] Length = 140 Score = 44.1 bits (102), Expect = 0.015, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 33/99 (33%) Query: 145 KGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNA 204 G K I + V+ ++ G+ T + + + G ++ N Sbjct: 40 PGADPYTRKTIQFQAELDRTLGASNVKVKSLGVDQAPFLTEYDPGNPAADESGMVKLPNV 99 Query: 205 NSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 N + EM M + + + +I + + + + + Sbjct: 100 NMLTEMADMREANRSYEANLQMIKQTRSMVAMTVDLLRT 138 Score = 36.0 bits (81), Expect = 5.2, Method: Composition-based stats. Identities = 11/77 (14%), Positives = 25/77 (32%), Gaps = 7/77 (9%) Query: 7 IGLAAQLALEQRLSTVADNMSNT----DTVG---FRTIKVKFSEVVGAIKNDIDQKISFV 59 I + QR+ V++N++N T G + ++F + + K+ + Sbjct: 11 IAGSGLQVQAQRMRVVSENLANMRSTGSTPGADPYTRKTIQFQAELDRTLGASNVKVKSL 70 Query: 60 ASGKEYLSKEVGSFIST 76 + E Sbjct: 71 GVDQAPFLTEYDPGNPA 87 >gi|285018212|ref|YP_003375923.1| flagellar basal body protein [Xanthomonas albilineans GPE PC73] gi|283473430|emb|CBA15935.1| probable flagellar basal body protein [Xanthomonas albilineans] Length = 132 Score = 44.1 bits (102), Expect = 0.015, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 23/49 (46%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 EQR+ +A N+SN DT G++ + F + A + + V + Sbjct: 20 EQRMKLIASNISNVDTPGYKAQDLDFDAAMRAAQGQREGTQLEVTDSRH 68 >gi|239995127|ref|ZP_04715651.1| flagellar basal-body rod protein FlgC [Alteromonas macleodii ATCC 27126] Length = 140 Score = 44.1 bits (102), Expect = 0.015, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 20/43 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ N N + EM M+ ++ + + + D ++ ++ Sbjct: 93 GYIYKPNVNIVEEMANMMSASKAYETNVQVADTTKRIFRRVLQ 135 Score = 35.2 bits (79), Expect = 7.8, Method: Composition-based stats. Identities = 12/55 (21%), Positives = 20/55 (36%), Gaps = 6/55 (10%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKND 51 I A RL+T A N++N ++V +R F+ + D Sbjct: 5 NVMQISSTGMEAENVRLNTTASNIANANSVSSSYDETYRARHPVFATALQDAMRD 59 >gi|288574709|ref|ZP_06393066.1| flagellar hook-associated protein FlgK [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570450|gb|EFC92007.1| flagellar hook-associated protein FlgK [Dethiosulfovibrio peptidovorans DSM 11002] Length = 856 Score = 44.1 bits (102), Expect = 0.015, Method: Composition-based stats. Identities = 9/39 (23%), Positives = 18/39 (46%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 N EM Q++ Q FN+I+ + ++ + I + Sbjct: 814 VNIDEEMMQIMQFQQSFNAISRYVTTLDEMLDRVINGMG 852 >gi|224534383|ref|ZP_03674961.1| flagellar basal-body rod protein FlgB [Borrelia spielmanii A14S] gi|224514485|gb|EEF84801.1| flagellar basal-body rod protein FlgB [Borrelia spielmanii A14S] Length = 135 Score = 44.1 bits (102), Expect = 0.015, Method: Composition-based stats. Identities = 12/32 (37%), Positives = 17/32 (53%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 L R S V+DN++N DT F+ K+ F Sbjct: 15 LDVLSLRQSVVSDNIANVDTPNFKRSKISFEA 46 >gi|126738558|ref|ZP_01754263.1| flagellar hook-associated protein K [Roseobacter sp. SK209-2-6] gi|126720357|gb|EBA17063.1| flagellar hook-associated protein K [Roseobacter sp. SK209-2-6] Length = 484 Score = 44.1 bits (102), Expect = 0.015, Method: Composition-based stats. Identities = 8/41 (19%), Positives = 20/41 (48%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 ++ N ++ A + V++N++N T G+ ++ S Sbjct: 5 SAINSAMSGLTANARSSQVVSENLANALTPGYSAQRLNLST 45 Score = 41.8 bits (96), Expect = 0.094, Method: Composition-based stats. Identities = 4/36 (11%), Positives = 18/36 (50%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +S E+ ++ + + + + +++ ++ M +R Sbjct: 448 VDSDAELQNLMIIERAYAANAKMLEAVDEMMQTLLR 483 >gi|152975155|ref|YP_001374672.1| flagellar basal body rod protein FlgB [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152023907|gb|ABS21677.1| flagellar basal-body rod protein FlgB [Bacillus cytotoxicus NVH 391-98] Length = 135 Score = 44.1 bits (102), Expect = 0.015, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 29/72 (40%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 L + +T+++N+SN +T G++ V FSE + + S + + Sbjct: 12 MNYLVTKRNTISNNISNANTPGYKAQDVTFSEQMQMSNELYKKNASDLKTNSSLYQTNKL 71 Query: 72 SFISTGTELDFA 83 + + +A Sbjct: 72 HLPTANVKNTYA 83 >gi|295399806|ref|ZP_06809787.1| flagellar basal-body rod protein FlgB [Geobacillus thermoglucosidasius C56-YS93] gi|312111682|ref|YP_003989998.1| flagellar basal-body rod protein FlgB [Geobacillus sp. Y4.1MC1] gi|294978209|gb|EFG53806.1| flagellar basal-body rod protein FlgB [Geobacillus thermoglucosidasius C56-YS93] gi|311216783|gb|ADP75387.1| flagellar basal-body rod protein FlgB [Geobacillus sp. Y4.1MC1] Length = 130 Score = 44.1 bits (102), Expect = 0.016, Method: Composition-based stats. Identities = 10/65 (15%), Positives = 24/65 (36%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 R +A+N++N DT ++ V+F + ++ K + + Sbjct: 14 GLDYAALREKVIANNIANVDTPNYKAKSVQFRTELDRALQPLEAKRTHPKHLPFHHQISN 73 Query: 71 GSFIS 75 F++ Sbjct: 74 QFFVT 78 >gi|229058378|ref|ZP_04196762.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH603] gi|228719887|gb|EEL71477.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH603] Length = 137 Score = 44.1 bits (102), Expect = 0.016, Method: Composition-based stats. Identities = 6/33 (18%), Positives = 14/33 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG 33 M + N + + + ++N+ N +T G Sbjct: 1 MFQAINASGSGLTTARKWMEVTSNNIVNANTTG 33 Score = 43.3 bits (100), Expect = 0.028, Method: Composition-based stats. Identities = 7/40 (17%), Positives = 22/40 (55%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 G++ N + EM ++ + + + T++++ N+K + + Sbjct: 91 GYVRYPNIDVTAEMTNVMVAQKMYEANTSVLNANKKMLDK 130 >gi|213585978|ref|ZP_03367804.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 546 Score = 44.1 bits (102), Expect = 0.016, Method: Composition-based stats. Identities = 9/52 (17%), Positives = 23/52 (44%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+TV++N++N + G+ ++ + Sbjct: 1 MSSLINHAMSGLNAAQAALNTVSNNINNYNVAGYTRQTTILAQANSTLGAGG 52 >gi|56551509|ref|YP_162348.1| flagellar basal-body rod protein FlgC [Zymomonas mobilis subsp. mobilis ZM4] gi|260752884|ref|YP_003225777.1| flagellar basal-body rod protein FlgC [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|4378860|gb|AAD19728.1| flagellar basal-body rod protein [Zymomonas mobilis subsp. mobilis ZM4] gi|56543083|gb|AAV89237.1| flagellar basal-body rod protein FlgC [Zymomonas mobilis subsp. mobilis ZM4] gi|258552247|gb|ACV75193.1| flagellar basal-body rod protein FlgC [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 134 Score = 44.1 bits (102), Expect = 0.016, Method: Composition-based stats. Identities = 5/35 (14%), Positives = 16/35 (45%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 ++ EM +MI + + + ++ + L+ + Sbjct: 96 VDTAQEMVEMIETARDYQNNVQVMQTAKSLTLDTL 130 >gi|16125206|ref|NP_419770.1| flagellar basal body rod protein FlgC [Caulobacter crescentus CB15] gi|221233942|ref|YP_002516378.1| flagellar basal body rod protein FlgC [Caulobacter crescentus NA1000] gi|13422230|gb|AAK22938.1| flagellar basal-body rod protein FlgC [Caulobacter crescentus CB15] gi|220963114|gb|ACL94470.1| flagellar basal-body rod protein flgC [Caulobacter crescentus NA1000] Length = 139 Score = 44.1 bits (102), Expect = 0.016, Method: Composition-based stats. Identities = 13/126 (10%), Positives = 34/126 (26%), Gaps = 3/126 (2%) Query: 113 SLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRR 172 V++S V + G+ ++ + +R Sbjct: 12 MAVASSALRAQQGRMRVIAENIANAHSTARTAGGDPYRRQVPVFKPTTVQGGEGVQMLRV 71 Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 + + P + G+++ N N+M E M + + + +I+ Sbjct: 72 DPDQSAFKTEYDPGNPAADAK---GYVKLPNVNTMVESLDMKEAQRAYEANLNVIETARS 128 Query: 233 SMLEAI 238 + Sbjct: 129 MQSRTL 134 Score = 39.9 bits (91), Expect = 0.37, Method: Composition-based stats. Identities = 10/102 (9%), Positives = 27/102 (26%), Gaps = 8/102 (7%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQKIS 57 + +A A + R+ +A+N++N + +R F + Q + Sbjct: 12 MAVASSALRAQQGRMRVIAENIANAHSTARTAGGDPYRRQVPVFKPTTVQGGEGV-QMLR 70 Query: 58 FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 + ++ + + L Sbjct: 71 VDPDQSAFKTEYDPGNPAADAKGYVKLPNVNTMVESLDMKEA 112 >gi|117928047|ref|YP_872598.1| hypothetical protein Acel_0839 [Acidothermus cellulolyticus 11B] gi|117648510|gb|ABK52612.1| protein of unknown function DUF1078 domain protein [Acidothermus cellulolyticus 11B] Length = 130 Score = 44.1 bits (102), Expect = 0.016, Method: Composition-based stats. Identities = 12/116 (10%), Positives = 34/116 (29%) Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183 +V + + V A + G V + Sbjct: 12 GTALTVNRKWMDAIADNVSNANDVVPGDQPVFAPRYVQVQAAPGGGVEVVAIRYGSSAGI 71 Query: 184 TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + + RG++ ++ + +M QMI + + + ++ + +A++ Sbjct: 72 ESYDPTNPQADARGYVRHADVDMTSQMTQMIMAQRSYEANLAIMTRATDAYKQALQ 127 >gi|330961193|gb|EGH61453.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv. maculicola str. ES4326] Length = 135 Score = 44.1 bits (102), Expect = 0.016, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 31/80 (38%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + I A QR +A+N+SN DT F+ ++FS V+ A + + Sbjct: 6 DKALGIHEKALNFRAQRAEVLANNISNADTPNFKARDLEFSSVLAAETDKTQNGHFALNK 65 Query: 62 GKEYLSKEVGSFISTGTELD 81 + G + GT + Sbjct: 66 TNSRHIEAEGMGNNDGTLMY 85 >gi|313905162|ref|ZP_07838531.1| flagellar hook-associated protein FlgK [Eubacterium cellulosolvens 6] gi|313470065|gb|EFR65398.1| flagellar hook-associated protein FlgK [Eubacterium cellulosolvens 6] Length = 668 Score = 44.1 bits (102), Expect = 0.016, Method: Composition-based stats. Identities = 13/86 (15%), Positives = 28/86 (32%), Gaps = 4/86 (4%) Query: 1 MQTS----FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56 M + F L++ A ++L N++N T G+ ++K S + Sbjct: 1 MIRATFAGFTTALSSLRANSKKLDVTGQNLANMTTEGYTRQEIKTSSLNYENPTSFYLNE 60 Query: 57 SFVASGKEYLSKEVGSFISTGTELDF 82 + V G + + + Sbjct: 61 NDVNVGFGVSIDRMAQLRDQFLDTQY 86 >gi|296186750|ref|ZP_06855152.1| hypothetical protein CLCAR_2214 [Clostridium carboxidivorans P7] gi|296048787|gb|EFG88219.1| hypothetical protein CLCAR_2214 [Clostridium carboxidivorans P7] Length = 160 Score = 44.1 bits (102), Expect = 0.016, Method: Composition-based stats. Identities = 6/40 (15%), Positives = 15/40 (37%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 S + EM ++ + + LI ++ + I + Sbjct: 119 SGVSLDEEMANLVQFQHCYQANAKLISTVDQLLDVVINGL 158 >gi|238762361|ref|ZP_04623332.1| Flagellar basal-body rod protein FlgC [Yersinia kristensenii ATCC 33638] gi|238699346|gb|EEP92092.1| Flagellar basal-body rod protein FlgC [Yersinia kristensenii ATCC 33638] Length = 141 Score = 44.1 bits (102), Expect = 0.016, Method: Composition-based stats. Identities = 9/47 (19%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 +G++ N + EM M+ ++ F + +++ KSM +++ + Sbjct: 94 QGYVFYPAVNVVSEMADMMSASRSFETNVEVLNSV-KSMQQSVLKLG 139 >gi|58039489|ref|YP_191453.1| flagellar hook-associated protein 1 FlgK [Gluconobacter oxydans 621H] gi|58001903|gb|AAW60797.1| Flagellar hook-associated protein 1 FlgK [Gluconobacter oxydans 621H] Length = 509 Score = 44.1 bits (102), Expect = 0.016, Method: Composition-based stats. Identities = 8/51 (15%), Positives = 20/51 (39%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 ++ +I + A++ ++ ++N+SN T G+ V Sbjct: 4 NSALSIATSGLNAVQNAMAVASNNVSNAGTSGYIKENANVQSTVAGNMGTG 54 Score = 37.2 bits (84), Expect = 2.2, Method: Composition-based stats. Identities = 13/173 (7%), Positives = 44/173 (25%), Gaps = 1/173 (0%) Query: 71 GSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVP 130 + + D G F+ + D + S + + + + Sbjct: 338 DGDVPGTSRTDLTPTGSVGFSQVMSVSSTYSDDPSKLLDSSTSG-TQTIQKVLSYGFGTT 396 Query: 131 IQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS 190 + ++ T + ++ ++ + S L + Sbjct: 397 SDSAGTSQTAAPSTNLGLTGTLSTGYTGNQGIISLATSLTAKQAATASDASSGLALSQTT 456 Query: 191 GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 ++ S + EM ++ L + + ++ + + I + Sbjct: 457 QTSLTSNLSGTSTVSVDTEMANIVTLQNAYAANAKVVSTVQTMFSALLSAIGT 509 >gi|95929195|ref|ZP_01311939.1| protein of unknown function DUF1078-like [Desulfuromonas acetoxidans DSM 684] gi|95134693|gb|EAT16348.1| protein of unknown function DUF1078-like [Desulfuromonas acetoxidans DSM 684] Length = 111 Score = 44.1 bits (102), Expect = 0.016, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 30/83 (36%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + ++ A RL++ A+N++N+ T G+ +V +E QK Sbjct: 1 MIDAMSSAMSGLQAQTLRLNSTANNVANSQTEGYAPSQVTLAENEQGGVRAQLQKPVNGT 60 Query: 61 SGKEYLSKEVGSFISTGTELDFA 83 + + +D Sbjct: 61 GDAQTAENQTSKVDLAKEMVDMM 83 Score = 37.2 bits (84), Expect = 1.9, Method: Composition-based stats. Identities = 5/38 (13%), Positives = 14/38 (36%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S + EM M+ Q +++ + + + + Sbjct: 70 TSKVDLAKEMVDMMQTKQFYSANLKTVSVADSMSGDLL 107 >gi|255028426|ref|ZP_05300377.1| flagellar basal body rod protein FlgC [Listeria monocytogenes LO28] Length = 124 Score = 44.1 bits (102), Expect = 0.016, Method: Composition-based stats. Identities = 9/40 (22%), Positives = 21/40 (52%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 G++ +N + EM ++ + + + T+ + NEK M + Sbjct: 78 GYVNYANVDMTAEMTNLMVGQKMYAANTSALQANEKMMEK 117 >gi|149908761|ref|ZP_01897422.1| LfgC [Moritella sp. PE36] gi|149808303|gb|EDM68242.1| LfgC [Moritella sp. PE36] Length = 140 Score = 44.1 bits (102), Expect = 0.016, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 20/43 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ SN N++ EM M+ ++ F S ++ +R Sbjct: 94 GYVFYSNVNAVAEMADMMSASRSFESSAEVMRRVNSMQQSLLR 136 Score = 36.8 bits (83), Expect = 2.7, Method: Composition-based stats. Identities = 14/99 (14%), Positives = 36/99 (36%), Gaps = 6/99 (6%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKISFVA 60 I + + RL+TVA N++N ++ + +K FS + + ++ + V Sbjct: 9 IAGSGMRSQTLRLNTVASNLANVNSAASSEKEAYHALKPIFSTIYQTSQETLEVTGASVN 68 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 S++ +G +++ + + Sbjct: 69 MLGVTRSQQAIERRYEPENTLANNDGYVFYSNVNAVAEM 107 >gi|148266109|ref|YP_001232815.1| flagellar hook-associated protein FlgK [Geobacter uraniireducens Rf4] gi|146399609|gb|ABQ28242.1| flagellar hook-associated protein FlgK [Geobacter uraniireducens Rf4] Length = 478 Score = 44.1 bits (102), Expect = 0.016, Method: Composition-based stats. Identities = 20/162 (12%), Positives = 39/162 (24%), Gaps = 8/162 (4%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID-------- 53 + G A A + L +N++N +T G+ ++ Sbjct: 4 NSLLETGRTALNAQKLALEVTGENITNVNTTGYSRQTTILETAPTTLERGFPLGSGVKVA 63 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113 + + G + AL+ E + F + Sbjct: 64 AVQRSYDGFLQTQIMGQNATYGQGKTSNSALQRVQQLFNEFTTDGLGVSLQNFFKSWQDL 123 Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVI 155 V+ G + S Q+ N S K + Sbjct: 124 TVNPQGAPERQAVLSQGQQLVDNFHRINSNLNDVKSDMNKSL 165 Score = 41.0 bits (94), Expect = 0.16, Method: Composition-based stats. Identities = 6/39 (15%), Positives = 14/39 (35%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S + E+ +I + + LI+ + + I Sbjct: 437 ASGVSLDEELANLIKYQKAYEGAAKLINVGSEMLDTVIN 475 >gi|308071106|ref|YP_003872711.1| flagellar hook-associated protein [Paenibacillus polymyxa E681] gi|305860385|gb|ADM72173.1| Flagellar hook-associated protein [Paenibacillus polymyxa E681] Length = 526 Score = 44.1 bits (102), Expect = 0.016, Method: Composition-based stats. Identities = 6/38 (15%), Positives = 16/38 (42%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S + EM MI +++ + + ++ + + I Sbjct: 482 SGVSLDEEMSNMIKFQHAYSAASRFMTTFDQLLDKLIN 519 Score = 37.5 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 8/40 (20%), Positives = 13/40 (32%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 + L+T N+SN +T G+ V Sbjct: 7 GIETAKRSLNTQTAALNTTGHNISNANTAGYSRQVVSMKA 46 >gi|268316362|ref|YP_003290081.1| flagellar basal body rod protein [Rhodothermus marinus DSM 4252] gi|262333896|gb|ACY47693.1| flagellar basal body rod protein [Rhodothermus marinus DSM 4252] Length = 112 Score = 44.1 bits (102), Expect = 0.016, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 34/110 (30%), Gaps = 9/110 (8%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A A RL +A N++N DT G++ + V F E + ++ I + Sbjct: 12 AMQAYTWRLKALAANIANLDTPGYQRVGVSFEEALQQARHQIPGLRQPEEVEPRMRMENT 71 Query: 71 GSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + A R + TR R + ++ Sbjct: 72 PPVLEDELME---------LADTQMRTQLTTRALREHFDLMRTAITGRTG 112 >gi|118581855|ref|YP_903105.1| flagellar hook-associated protein FlgK [Pelobacter propionicus DSM 2379] gi|118504565|gb|ABL01048.1| flagellar hook-associated protein FlgK [Pelobacter propionicus DSM 2379] Length = 456 Score = 44.1 bits (102), Expect = 0.016, Method: Composition-based stats. Identities = 5/38 (13%), Positives = 14/38 (36%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S + E+ ++ + + + LI + M + Sbjct: 416 KSGVSLDEELTNLVMYQRSYQASAKLITTVTEMMDTLL 453 Score = 40.6 bits (93), Expect = 0.17, Method: Composition-based stats. Identities = 8/51 (15%), Positives = 18/51 (35%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 ++ IG + + +N++N +T G+ +V N Sbjct: 5 SAMEIGKRGLIIYQVATEVTGENIANVNTEGYSRQRVILETSPPTTHNGFP 55 >gi|330875980|gb|EGH10129.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330967087|gb|EGH67347.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv. actinidiae str. M302091] Length = 135 Score = 44.1 bits (102), Expect = 0.016, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 30/80 (37%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + I A QR +A+N+SN DT F+ ++FS V+ A + + Sbjct: 6 DKALGIHEKALNFRAQRAEVLANNISNADTPNFKARDLEFSSVLAAENDKAQNGHFALNK 65 Query: 62 GKEYLSKEVGSFISTGTELD 81 + G GT + Sbjct: 66 TNSRHIEAEGMGNDDGTLMY 85 >gi|115523571|ref|YP_780482.1| flagellar basal body rod protein FlgC [Rhodopseudomonas palustris BisA53] gi|115517518|gb|ABJ05502.1| flagellar basal-body rod protein FlgC [Rhodopseudomonas palustris BisA53] Length = 141 Score = 44.1 bits (102), Expect = 0.016, Method: Composition-based stats. Identities = 7/49 (14%), Positives = 19/49 (38%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G ++ N N + EM M + + + +I + + + + + Sbjct: 93 AAGNVKYPNVNPLIEMTDMRDAQRSYEANLNIISATRRMVQRTLDILKA 141 Score = 42.9 bits (99), Expect = 0.040, Method: Composition-based stats. Identities = 10/59 (16%), Positives = 21/59 (35%), Gaps = 9/59 (15%) Query: 1 MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKN 50 M S I + A R+ +A+N++N + +R F+ + + Sbjct: 6 MDFSRSMAIATSGLRAQAGRMRVIAENIANAQSTAQTAGGDPYRRKVPTFTTALDRALD 64 >gi|308273186|emb|CBX29789.1| Flagellar basal-body rod protein flgC [uncultured Desulfobacterium sp.] Length = 140 Score = 44.1 bits (102), Expect = 0.017, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 20/46 (43%), Gaps = 1/46 (2%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G L N + EM M+ F++ + I + +L+A+ I Sbjct: 95 GCLSKPNVDLAVEMANMLMARNAFSANLSAIKSTRQMVLKAL-EIG 139 Score = 41.4 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 9/31 (29%), Positives = 16/31 (51%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32 S I + A +R+ +A+N+SN +T Sbjct: 4 MESLKISSSGLYAQRKRMDIIAENLSNIETT 34 >gi|301631994|ref|XP_002945076.1| PREDICTED: flagellar basal-body rod protein flgB-like [Xenopus (Silurana) tropicalis] Length = 141 Score = 44.1 bits (102), Expect = 0.017, Method: Composition-based stats. Identities = 13/77 (16%), Positives = 26/77 (33%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69 A + +R +A N++N DT G+ +F++ + A +D + Sbjct: 14 NALMLRAERQRVIASNIANADTPGYVARDFRFADALRAATDDGTALVRQRLGTDGTRHAG 73 Query: 70 VGSFISTGTELDFALEG 86 + T G Sbjct: 74 HIRLPAARTGEQPGTLG 90 >gi|293115684|ref|ZP_05792627.2| flagellar basal-body rod protein FlgB [Butyrivibrio crossotus DSM 2876] gi|292808800|gb|EFF68005.1| flagellar basal-body rod protein FlgB [Butyrivibrio crossotus DSM 2876] Length = 150 Score = 44.1 bits (102), Expect = 0.017, Method: Composition-based stats. Identities = 13/74 (17%), Positives = 28/74 (37%), Gaps = 2/74 (2%) Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE--VGSFI 74 +R + +NMSN DT G++ ++ F V+ + + + Sbjct: 39 RRSEVLNNNMSNVDTPGYKRQELSFESVLSDAVERAGSSSRNLTQTVRNIDFNCVRPTIY 98 Query: 75 STGTELDFALEGDA 88 + L + L+G+ Sbjct: 99 TDDANLSYRLDGNN 112 >gi|262273531|ref|ZP_06051345.1| flagellar basal-body rod protein FlgC [Grimontia hollisae CIP 101886] gi|262222509|gb|EEY73820.1| flagellar basal-body rod protein FlgC [Grimontia hollisae CIP 101886] Length = 126 Score = 44.1 bits (102), Expect = 0.017, Method: Composition-based stats. Identities = 10/46 (21%), Positives = 23/46 (50%), Gaps = 1/46 (2%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G++ S N + EM M+ ++ F + ++ +SM ++I + Sbjct: 79 GYVFYSQVNPVEEMADMMSASRNFETNVDVMTRA-RSMQQSILRLG 123 Score = 38.3 bits (87), Expect = 0.90, Method: Composition-based stats. Identities = 15/72 (20%), Positives = 24/72 (33%), Gaps = 6/72 (8%) Query: 12 QLALEQRLSTVADNMSNTDT------VGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65 A RL+ VA N++N D G+R + F V+ N + V E Sbjct: 1 MAAQTVRLNAVASNLANADVVSGSEQTGYRAKRPVFETVMVDKGNGTQGAMVRVKEVLES 60 Query: 66 LSKEVGSFISTG 77 + + Sbjct: 61 DAPLQRRYEPNH 72 >gi|300024609|ref|YP_003757220.1| flagellar basal body rod protein [Hyphomicrobium denitrificans ATCC 51888] gi|299526430|gb|ADJ24899.1| flagellar basal body rod protein [Hyphomicrobium denitrificans ATCC 51888] Length = 125 Score = 44.1 bits (102), Expect = 0.017, Method: Composition-based stats. Identities = 10/33 (30%), Positives = 20/33 (60%), Gaps = 1/33 (3%) Query: 15 LEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVG 46 L QR S ++ N++N +T G++ V+ F + + Sbjct: 17 LAQRQSVISQNVANANTPGYKARDVESFEDAMR 49 >gi|226313073|ref|YP_002772967.1| flagellar basal-body rod protein FlgB [Brevibacillus brevis NBRC 100599] gi|226096021|dbj|BAH44463.1| flagellar basal-body rod protein FlgB [Brevibacillus brevis NBRC 100599] Length = 136 Score = 44.1 bits (102), Expect = 0.017, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 24/62 (38%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 + A R T+A+N++N DT F++ +V F + N A Sbjct: 13 SLDAATLRHRTIANNLANIDTPQFKSQQVIFESFLQDELNARAGNGKLEAYRTNQRHLPF 72 Query: 71 GS 72 G+ Sbjct: 73 GN 74 >gi|197103407|ref|YP_002128785.1| putative flagellar basal-body rod protein FlgC [Phenylobacterium zucineum HLK1] gi|196480683|gb|ACG80210.1| putative flagellar basal-body rod protein FlgC [Phenylobacterium zucineum HLK1] Length = 141 Score = 44.1 bits (102), Expect = 0.017, Method: Composition-based stats. Identities = 11/80 (13%), Positives = 26/80 (32%), Gaps = 7/80 (8%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQKIS 57 I A A + R+ +A+N++N+ T +R F+ + + Q + Sbjct: 12 MAIAAMALRAQQARMRIIAENIANSQTTAATPGGDPYRRQMPIFAPLKLEDGSVSVQLVR 71 Query: 58 FVASGKEYLSKEVGSFISTG 77 + + + Sbjct: 72 TEPDPTAFKKEYSPGHPAAD 91 Score = 39.9 bits (91), Expect = 0.33, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 36/115 (31%), Gaps = 3/115 (2%) Query: 129 VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED 188 + I ++ + A + L +S VR E + +P Sbjct: 29 IAENIANSQTTAATPGGDPYRRQMPIFAPLKLEDGSVSVQLVRTEPDPTAFKKEYSPGHP 88 Query: 189 LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 + G++ SN ++ E + + + +ID + +R + S Sbjct: 89 AADP---SGYVTLSNVETLVESLDFKAAQRAYEANLNVIDTSHAMEQSTMRLLQS 140 >gi|153953775|ref|YP_001394540.1| flagellar basal body rod protein FlgB [Clostridium kluyveri DSM 555] gi|219854391|ref|YP_002471513.1| hypothetical protein CKR_1048 [Clostridium kluyveri NBRC 12016] gi|146346656|gb|EDK33192.1| FlgB [Clostridium kluyveri DSM 555] gi|219568115|dbj|BAH06099.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 133 Score = 44.1 bits (102), Expect = 0.017, Method: Composition-based stats. Identities = 10/35 (28%), Positives = 19/35 (54%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV 45 A +R ++DN++N +T G++ V F E + Sbjct: 19 GLDAASERSKAISDNLANVNTAGYKRKYVTFEESL 53 >gi|332162903|ref|YP_004299480.1| flagellar basal-body rod protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318604250|emb|CBY25748.1| flagellar basal-body rod protein FlgC [Yersinia enterocolitica subsp. palearctica Y11] gi|325667133|gb|ADZ43777.1| Flagellar basal-body rod protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330863353|emb|CBX73476.1| flagellar basal-body rod protein flgC [Yersinia enterocolitica W22703] Length = 141 Score = 44.1 bits (102), Expect = 0.017, Method: Composition-based stats. Identities = 7/44 (15%), Positives = 20/44 (45%) Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +G++ N + EM M+ ++ F + +++ + +R Sbjct: 94 QGYVFYPAVNVVSEMADMMSASRSFETNVEVLNSVKSMQQSVLR 137 Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats. Identities = 14/96 (14%), Positives = 29/96 (30%), Gaps = 6/96 (6%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQK 55 + + +A A RL+ +A N++N ++ ++ FS V Sbjct: 4 NNIYRVSGSAMTAQTIRLNAIASNLANAESPAASAATVYKARSPVFSAVYSPRSATNPGG 63 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA 91 ++ + + GS A F Sbjct: 64 VNGAQVQVLDVVETGGSVQRYEPNHPLANPQGYVFY 99 >gi|161503729|ref|YP_001570841.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160865076|gb|ABX21699.1| hypothetical protein SARI_01814 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 553 Score = 44.1 bits (102), Expect = 0.017, Method: Composition-based stats. Identities = 9/52 (17%), Positives = 23/52 (44%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+TV++N++N + G+ ++ + Sbjct: 1 MSSLINHAMSGLNAAQSALNTVSNNINNYNVAGYTRQTTILAQANSTLGAGG 52 >gi|120603704|ref|YP_968104.1| flagellar basal body rod protein FlgB [Desulfovibrio vulgaris DP4] gi|120563933|gb|ABM29677.1| flagellar basal-body rod protein FlgB [Desulfovibrio vulgaris DP4] Length = 136 Score = 44.1 bits (102), Expect = 0.017, Method: Composition-based stats. Identities = 8/39 (20%), Positives = 19/39 (48%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50 QR + V N++N T G++ +++F + + + Sbjct: 16 MDMQLQRQNVVMSNIANVRTPGYKPRELEFEKELQSALG 54 >gi|154175290|ref|YP_001408541.1| flagellar basal body rod protein FlgC [Campylobacter curvus 525.92] gi|112803036|gb|EAU00380.1| flagellar basal-body rod protein FlgC [Campylobacter curvus 525.92] Length = 167 Score = 44.1 bits (102), Expect = 0.017, Method: Composition-based stats. Identities = 8/45 (17%), Positives = 18/45 (40%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 G++ N N + EM ++ T+ + + + AI + Sbjct: 118 GYVAFPNINPVIEMADLVEATRAYQANVAAFQSAKMIAQSAITLL 162 Score = 40.2 bits (92), Expect = 0.23, Method: Composition-based stats. Identities = 9/40 (22%), Positives = 17/40 (42%), Gaps = 6/40 (15%) Query: 11 AQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44 A R++ ++ N++N T G +R +V F Sbjct: 13 GLSAQRFRMNVISSNIANAQTTRTAEGGPYRRQEVIFKAF 52 >gi|260768775|ref|ZP_05877709.1| flagellar hook-associated protein FlgK [Vibrio furnissii CIP 102972] gi|260616805|gb|EEX41990.1| flagellar hook-associated protein FlgK [Vibrio furnissii CIP 102972] gi|315180478|gb|ADT87392.1| hypothetical flagellar hook-associated protein [Vibrio furnissii NCTC 11218] Length = 456 Score = 44.1 bits (102), Expect = 0.017, Method: Composition-based stats. Identities = 12/81 (14%), Positives = 28/81 (34%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + +NI L+ +A + ++ A N +N ++ G+ V S V+ + Sbjct: 1 MSMYNIALSGAMANQVAMNVTAQNTANINSAGYSRKVVDQSAVIYGNAGPNSAGSGVSVT 60 Query: 62 GKEYLSKEVGSFISTGTELDF 82 +S + + Sbjct: 61 SIRRVSDQAAVERLRSANTEL 81 >gi|237752943|ref|ZP_04583423.1| flagellar hook-associated protein FlgK [Helicobacter winghamensis ATCC BAA-430] gi|229375210|gb|EEO25301.1| flagellar hook-associated protein FlgK [Helicobacter winghamensis ATCC BAA-430] Length = 608 Score = 44.1 bits (102), Expect = 0.017, Method: Composition-based stats. Identities = 3/35 (8%), Positives = 14/35 (40%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 + E+ +I +++ +I ++ + + Sbjct: 570 VSVDDELVNLIRFQSGYSANAKMITTIDEMINTLL 604 Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 4/29 (13%), Positives = 11/29 (37%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTD 30 +S N + + +N++N + Sbjct: 5 LSSLNTPYTGLTGHQVMVDVTGNNIANAN 33 >gi|289208111|ref|YP_003460177.1| flagellar basal-body rod protein FlgB [Thioalkalivibrio sp. K90mix] gi|288943742|gb|ADC71441.1| flagellar basal-body rod protein FlgB [Thioalkalivibrio sp. K90mix] Length = 136 Score = 44.1 bits (102), Expect = 0.017, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 28/85 (32%), Gaps = 4/85 (4%) Query: 1 MQTSFNIGLA----AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56 M S + + A +R+ +A N++N DT ++ + F V+ A + Sbjct: 1 MSLSLDKAMGILPEAVNVRAKRMELLASNIANADTPNYKARDIDFRSVLQAAAGEGGNMP 60 Query: 57 SFVASGKEYLSKEVGSFISTGTELD 81 + G + L Sbjct: 61 MASTHQGHIGAGGAGGANGSMETLY 85 >gi|154174839|ref|YP_001408540.1| flagellar basal body rod protein FlgB [Campylobacter curvus 525.92] gi|112803089|gb|EAU00433.1| flagellar basal-body rod protein FlgB [Campylobacter curvus 525.92] Length = 144 Score = 44.1 bits (102), Expect = 0.017, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 22/43 (51%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 AA A E R ++ N++N DT ++ + F V+ ++I Sbjct: 15 AAMAAREMRQKLISGNIANIDTPFYKARDINFESVLRQKADEI 57 >gi|254419217|ref|ZP_05032941.1| flagellar basal-body rod protein FlgC [Brevundimonas sp. BAL3] gi|196185394|gb|EDX80370.1| flagellar basal-body rod protein FlgC [Brevundimonas sp. BAL3] Length = 128 Score = 44.1 bits (102), Expect = 0.017, Method: Composition-based stats. Identities = 17/118 (14%), Positives = 34/118 (28%), Gaps = 9/118 (7%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTD----TVG---FRTIKVKFS--EVVGAIKNDIDQK 55 + +A A + R+ +A+N++N T G +R F EV GA + + Sbjct: 1 MAVAASALKAQQSRMRVIAENIANAQSTARTPGGEPYRRQIPVFQAREVDGATGVTLAEV 60 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113 K + + G + ++ + T Sbjct: 61 RPDQGEFKMDYDPSHPAANAQGYVMRPNVDTLVEAMDMREAQRAYEANLNVIETARSM 118 Score = 43.7 bits (101), Expect = 0.021, Method: Composition-based stats. Identities = 5/44 (11%), Positives = 17/44 (38%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 +G++ N +++ E M + + + +I+ + Sbjct: 80 AQGYVMRPNVDTLVEAMDMREAQRAYEANLNVIETARSMDSRTL 123 >gi|146311243|ref|YP_001176317.1| flagellar basal body rod protein FlgB [Enterobacter sp. 638] gi|145318119|gb|ABP60266.1| flagellar basal-body rod protein FlgB [Enterobacter sp. 638] Length = 138 Score = 44.1 bits (102), Expect = 0.018, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 26/66 (39%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR +A N++N DT G++ + FS + + + + + VA Sbjct: 15 ALNLRAQRQEVLAGNIANADTPGYQARDMDFSSELKKVMDRGRAEGTGVALALTSSRHIP 74 Query: 71 GSFIST 76 ++ Sbjct: 75 AQAMTA 80 >gi|317133491|ref|YP_004092805.1| flagellar basal-body rod protein FlgC [Ethanoligenens harbinense YUAN-3] gi|315471470|gb|ADU28074.1| flagellar basal-body rod protein FlgC [Ethanoligenens harbinense YUAN-3] Length = 143 Score = 44.1 bits (102), Expect = 0.018, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 6/56 (10%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEVVGAIKND 51 + NI + A R+ +++N++N DT G ++ V FSE + Sbjct: 3 LNALNIPGSGLTAQRLRMDVISENLANQDTTETADGGPYQRKTVSFSERTQPTFDG 58 Score = 41.8 bits (96), Expect = 0.084, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 19/37 (51%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 G++ N +++ EM ++ ++ +++ T + + Sbjct: 98 GYVRLPNVDTVTEMTDLMESSRSYSADVTAFNALKGM 134 >gi|238788320|ref|ZP_04632114.1| Flagellar hook-associated protein 1 [Yersinia frederiksenii ATCC 33641] gi|238723566|gb|EEQ15212.1| Flagellar hook-associated protein 1 [Yersinia frederiksenii ATCC 33641] Length = 550 Score = 44.1 bits (102), Expect = 0.018, Method: Composition-based stats. Identities = 11/39 (28%), Positives = 20/39 (51%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 N ++ A + LSTV++N+SN G+ F++ Sbjct: 1 MNTAMSGLSAAQYALSTVSNNISNYQVAGYNRQNTIFAQ 39 >gi|330961205|gb|EGH61465.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv. maculicola str. ES4326] Length = 686 Score = 44.1 bits (102), Expect = 0.018, Method: Composition-based stats. Identities = 11/38 (28%), Positives = 21/38 (55%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39 + +IGL+ A ++T+ +N +N DT G+ +V Sbjct: 1 MSLISIGLSGINASSAAINTIGNNTANVDTAGYSRQQV 38 >gi|295097206|emb|CBK86296.1| flagellar basal-body rod protein FlgB [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 136 Score = 44.1 bits (102), Expect = 0.018, Method: Composition-based stats. Identities = 12/78 (15%), Positives = 27/78 (34%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A L +R +A N++N DT G++ + FS+ + + + + Sbjct: 15 ALGLLSRRQEVLASNIANADTPGYQARDIDFSQQLKNALGNKPASGPVTMALTSSKHMQG 74 Query: 71 GSFISTGTELDFALEGDA 88 +L + + Sbjct: 75 KKMPFDDAQLLYRVPDQP 92 >gi|257484952|ref|ZP_05638993.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv. tabaci ATCC 11528] gi|298487860|ref|ZP_07005900.1| Flagellar basal-body rod protein flgB [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298157585|gb|EFH98665.1| Flagellar basal-body rod protein flgB [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|331011039|gb|EGH91095.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 135 Score = 44.1 bits (102), Expect = 0.018, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 30/80 (37%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + I A QR +A+N+SN DT F+ + FS V+ A + + + Sbjct: 6 DKALGIHEKALNFRAQRAEVLANNISNADTPNFKARDLDFSSVLAAENDKVQNGHFALNK 65 Query: 62 GKEYLSKEVGSFISTGTELD 81 + G GT L Sbjct: 66 TNSRHIEAEGMGNDDGTLLY 85 >gi|182412215|ref|YP_001817281.1| flagellar hook-associated protein FlgK [Opitutus terrae PB90-1] gi|177839429|gb|ACB73681.1| flagellar hook-associated protein FlgK [Opitutus terrae PB90-1] Length = 484 Score = 44.1 bits (102), Expect = 0.018, Method: Composition-based stats. Identities = 17/157 (10%), Positives = 44/157 (28%), Gaps = 18/157 (11%) Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV------IAT 157 G D + + +G + + N G G + V +AT Sbjct: 327 GGVAADDFFATLDGNGDPITAGTFQLASGLTAFSLHANDGTAGAPAGDNSVALAIAQLAT 386 Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVK---RGFLED---------SNAN 205 + + S + + +G T + + +E S + Sbjct: 387 RRFSTTGAPPDLIDGTLSSFYSSAVSGLGQATAGATTRLNSQESIEQLVRSQRDAVSGVS 446 Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 E+ ++ + F + + + +K + + + Sbjct: 447 LDEELSDLLKYQRAFQASSRVFQTIDKLLGVVVEQLG 483 Score = 35.6 bits (80), Expect = 6.9, Method: Composition-based stats. Identities = 8/40 (20%), Positives = 18/40 (45%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 S N + A A + + T N++N + + +V + + Sbjct: 7 SLNSTVGALSAHSRSIETAGKNLANVNNASYARQRVVYGD 46 >gi|57238490|ref|YP_179621.1| flagellar hook-associated protein FlgK [Campylobacter jejuni RM1221] gi|57167294|gb|AAW36073.1| flagellar hook-associated protein FlgK, putative [Campylobacter jejuni RM1221] gi|315058921|gb|ADT73250.1| Flagellar hook-associated protein flgK [Campylobacter jejuni subsp. jejuni S3] Length = 608 Score = 44.1 bits (102), Expect = 0.018, Method: Composition-based stats. Identities = 11/78 (14%), Positives = 23/78 (29%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 G+ A E +++T +N+SN + + +V + + Sbjct: 7 LYTGVTGLKASEVQIATTGNNISNANATFYTRQRVVQTTNGYITTGGVQVGTGTAVESIV 66 Query: 65 YLSKEVGSFISTGTELDF 82 L E + G Sbjct: 67 RLHDEYSYYKLKGASTQL 84 Score = 39.9 bits (91), Expect = 0.33, Method: Composition-based stats. Identities = 5/48 (10%), Positives = 18/48 (37%) Query: 191 GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 +V + S N+ E+ +I + + ++ ++ + + Sbjct: 557 YNSVYSEYQSKSGVNTNEELAALIQYQSSYGAAAKIVSTVDQMLDTLL 604 >gi|332531624|ref|ZP_08407521.1| flagellar hook-associated protein FlgK [Hylemonella gracilis ATCC 19624] gi|332038987|gb|EGI75416.1| flagellar hook-associated protein FlgK [Hylemonella gracilis ATCC 19624] Length = 701 Score = 44.1 bits (102), Expect = 0.018, Method: Composition-based stats. Identities = 9/71 (12%), Positives = 20/71 (28%), Gaps = 1/71 (1%) Query: 13 LALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGS 72 + L+ + +N++N +T G+ + + G V + Sbjct: 13 TTNQNVLNVIGNNIANVNTEGYSRQQAILKSIPGQYM-GTGYYGKGVEISTVTRIYDTFL 71 Query: 73 FISTGTELDFA 83 T A Sbjct: 72 TRQAATTKSVA 82 Score = 35.2 bits (79), Expect = 7.0, Method: Composition-based stats. Identities = 15/164 (9%), Positives = 42/164 (25%), Gaps = 6/164 (3%) Query: 83 ALEGDAWFALESPRGIILTRDGRFKVTDD---GSLVSASGKYPVLDMASVPIQIPQKDEI 139 A G+ + R G ++ G D +V + + Sbjct: 541 ATAGELYSYTPGNPIEADGRTTNLPFDPTTEWGWSLTLKGVPQPGDSFTVKTNPYTQLDA 600 Query: 140 FNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFL 199 N ++ D + + + + V++++ Sbjct: 601 ANAQAMMDLRDMKLF---DKAPLTDGYASLIADIGTKTLGAKQTAAVSEQIAVSIEQDRT 657 Query: 200 EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 S N E +++ Q + + + + I ++ + Sbjct: 658 AISGVNLDEEAARLLQFQQAYQAAGKAMQVAQTLFDTLIASVQA 701 >gi|157165285|ref|YP_001467064.1| flagellar basal body rod protein FlgC [Campylobacter concisus 13826] gi|112800440|gb|EAT97784.1| flagellar basal-body rod protein FlgC [Campylobacter concisus 13826] Length = 166 Score = 44.1 bits (102), Expect = 0.018, Method: Composition-based stats. Identities = 9/45 (20%), Positives = 18/45 (40%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 G++ N N + EM ++ T+ + + + AI I Sbjct: 118 GYVAFPNINPVIEMADLLEATRAYQANVASFQNAKTIAQSAISLI 162 Score = 43.3 bits (100), Expect = 0.031, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 11 AQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44 A R++ ++ N++N T G +R +V F E+ Sbjct: 13 GLSAQRFRMNVISSNIANAQTTRTAEGGPYRRQEVIFKEM 52 >gi|82702459|ref|YP_412025.1| flagellar hook-associated protein FlgK [Nitrosospira multiformis ATCC 25196] gi|82410524|gb|ABB74633.1| conserved hypothetical protein [Nitrosospira multiformis ATCC 25196] Length = 638 Score = 44.1 bits (102), Expect = 0.018, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 30/83 (36%), Gaps = 3/83 (3%) Query: 1 MQTSFN-IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV--KFSEVVGAIKNDIDQKIS 57 M IGL+A A ++ L N+SNT T G+ +V S+ I Q + Sbjct: 1 MSNGIFGIGLSALQAAQRGLLVTGHNISNTATPGYTRQQVIQSTSDARATGSGFIGQGVQ 60 Query: 58 FVASGKEYLSKEVGSFISTGTEL 80 + Y GTE Sbjct: 61 VDTVKRAYNQFLSRQVAQAGTES 83 Score = 39.5 bits (90), Expect = 0.39, Method: Composition-based stats. Identities = 17/147 (11%), Positives = 40/147 (27%), Gaps = 7/147 (4%) Query: 94 SPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK 153 +P + T G G V +G D S+ + N G + Sbjct: 493 NPASVPFTAGGPITFN--GWTVQITGTPQPGDTFSIGPNTDGVADNRNALLLGALQSSNT 550 Query: 154 VIATMGLYSVDMSQ--GFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMG 211 + A Y Q + + + +++ ++ N E Sbjct: 551 LAAGGASYRGAYGQLVSLMGNKTRELEVTAGAQAALLTQTRALQQS---EAGVNLDEEAA 607 Query: 212 QMIHLTQKFNSITTLIDENEKSMLEAI 238 ++ Q + + + +I + + Sbjct: 608 NLLRYQQAYQAASKVIQTANQMFDALL 634 >gi|87119679|ref|ZP_01075576.1| flagellar basal-body rod protein FlgB [Marinomonas sp. MED121] gi|86165155|gb|EAQ66423.1| flagellar basal-body rod protein FlgB [Marinomonas sp. MED121] Length = 133 Score = 44.1 bits (102), Expect = 0.018, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 4/56 (7%) Query: 1 MQTSFNIGLAA----QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M SF A R + +A+N++N DT ++ + FS + +ND Sbjct: 1 MAISFESAFAGHDKFLKFRSDRSAVLANNIANADTPNYKARDISFSSAMSKAQNDA 56 >gi|291617017|ref|YP_003519759.1| FlgB [Pantoea ananatis LMG 20103] gi|291152047|gb|ADD76631.1| FlgB [Pantoea ananatis LMG 20103] gi|327393468|dbj|BAK10890.1| flagellar basal-body rod protein FlgB [Pantoea ananatis AJ13355] Length = 157 Score = 44.1 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 28/78 (35%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + + G A QR +A N++N DT G++ + F+ + + + S +A Sbjct: 26 DAALHFGTEALNLRAQRQEILASNIANADTPGYQARDIDFASELNRAMANGRAEGSSLAL 85 Query: 62 GKEYLSKEVGSFISTGTE 79 S + Sbjct: 86 KVTSARHIEAQTNSAPSM 103 >gi|32266375|ref|NP_860407.1| flagellar hook-associated protein FlgK [Helicobacter hepaticus ATCC 51449] gi|32262425|gb|AAP77473.1| flagellar hook-associated protein FlgK [Helicobacter hepaticus ATCC 51449] Length = 606 Score = 44.1 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 11/72 (15%), Positives = 23/72 (31%) Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 Q R + +D VK+ L S + EM +I + + + Sbjct: 531 QFLAGRVANQTEATQRTKETKDAVLSAVKKEHLAISQVSLDEEMVNLIKFQGGYAANAKV 590 Query: 227 IDENEKSMLEAI 238 I ++ + + Sbjct: 591 ITTIDRMIETLL 602 Score = 38.7 bits (88), Expect = 0.66, Method: Composition-based stats. Identities = 6/29 (20%), Positives = 11/29 (37%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTD 30 +S N A + + +N+SN Sbjct: 5 LSSLNTSYTGLQAHQLMVDVTGNNISNAS 33 >gi|331269311|ref|YP_004395803.1| flagellar basal-body rod protein FlgB [Clostridium botulinum BKT015925] gi|329125861|gb|AEB75806.1| flagellar basal-body rod protein FlgB [Clostridium botulinum BKT015925] Length = 134 Score = 44.1 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 24/43 (55%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 + A +R + + +N+SN +T G++ V F + + K+ ++ Sbjct: 19 SLNATAKRKNVINNNISNFNTKGYKRSYVTFEDSLKESKDKLN 61 >gi|262276410|ref|ZP_06054219.1| flagellar hook-associated protein FlgK [Grimontia hollisae CIP 101886] gi|262220218|gb|EEY71534.1| flagellar hook-associated protein FlgK [Grimontia hollisae CIP 101886] Length = 625 Score = 44.1 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 19/114 (16%), Positives = 38/114 (33%), Gaps = 2/114 (1%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFS--EVVGAIKNDIDQKISFVASGKEYLSK 68 L +++L+T N+SN +T G+ V+ + N Q + A + Y Sbjct: 12 GVLTAQRQLNTTGHNISNVNTDGYSRQSVEQRANDSAYWSANQWGQGVHAAAVRRNYDKF 71 Query: 69 EVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYP 122 V + T + L A ++ + + + + V P Sbjct: 72 AVNEYNITTSALAHAQTRNSQLTMLDDMMSHAAKKIPENMNEFYGAVKGLADSP 125 Score = 39.9 bits (91), Expect = 0.33, Method: Composition-based stats. Identities = 5/40 (12%), Positives = 14/40 (35%) Query: 200 EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E S N E M+ + + + ++ ++ + Sbjct: 583 EISGVNLDEEAANMMKFQHAYMASSRIMTAANETFETLLN 622 >gi|238751759|ref|ZP_04613247.1| Flagellar basal-body rod protein flgB [Yersinia rohdei ATCC 43380] gi|238710030|gb|EEQ02260.1| Flagellar basal-body rod protein flgB [Yersinia rohdei ATCC 43380] Length = 137 Score = 44.1 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 24/65 (36%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR ++ N++N DT GF+ + FS + + + V+ Sbjct: 15 ALNLRAQRQEILSSNIANADTPGFQARDIDFSSQLQKVMEQGRVNGTGVSLSLTSARHIP 74 Query: 71 GSFIS 75 S + Sbjct: 75 ASTVQ 79 >gi|225849064|ref|YP_002729228.1| flagellar hook-associated protein FlgK [Sulfurihydrogenibium azorense Az-Fu1] gi|225644050|gb|ACN99100.1| flagellar hook-associated protein FlgK [Sulfurihydrogenibium azorense Az-Fu1] Length = 483 Score = 44.1 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 19/202 (9%), Positives = 54/202 (26%), Gaps = 7/202 (3%) Query: 40 KFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 F+ V + N + +K + + S+ + + + P+ + Sbjct: 284 DFTTVFATVFNKVHKKGYGLDGSTNLDFFTIDPSKSSTKID----ASNIYLNITDPKKVA 339 Query: 100 LTRDGRFKV--TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157 L ++ + +G + + + + E + S I Sbjct: 340 LAQNSTYLNSDNTNGKDLLGLKNNIRVLYTNPSQPVLTPAEEAALQSSLNDSTNYTYIKD 399 Query: 158 MGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLT 217 ++ V +S S + + N E+ + L Sbjct: 400 HTFAEFYNTK-LVADISSTSSYIKQQQQNNKYLYDAITEKMKNIAGVNMDEELINLSKLQ 458 Query: 218 QKFNSITTLIDENEKSMLEAIR 239 + + + +I ++ M + Sbjct: 459 RSYQASARIITVTDELMQTILN 480 >gi|66046700|ref|YP_236541.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv. syringae B728a] gi|63257407|gb|AAY38503.1| Flagellar basal body rod protein:Protein of unknown function DUF1078 [Pseudomonas syringae pv. syringae B728a] Length = 686 Score = 44.1 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 35/97 (36%), Gaps = 1/97 (1%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + +IGL+ A ++T+ +N +N DT G+ +V + I + Sbjct: 1 MSLISIGLSGINASSAAINTIGNNTANVDTAGYSRQQVL-TTASAQIALGQGVGYIGTGT 59 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98 + + S++ T + AL DA Sbjct: 60 TLSDVRRIYNSYLDTQLQSSTALSADALAYSGQASKT 96 >gi|16799794|ref|NP_470062.1| flagellar basal body rod protein FlgC [Listeria innocua Clip11262] gi|16802753|ref|NP_464238.1| flagellar basal body rod protein FlgC [Listeria monocytogenes EGD-e] gi|46906962|ref|YP_013351.1| flagellar basal body rod protein FlgC [Listeria monocytogenes serotype 4b str. F2365] gi|47091674|ref|ZP_00229470.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes str. 4b H7858] gi|47095277|ref|ZP_00232888.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes str. 1/2a F6854] gi|217965191|ref|YP_002350869.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes HCC23] gi|224498793|ref|ZP_03667142.1| flagellar basal body rod protein FlgC [Listeria monocytogenes Finland 1988] gi|224501984|ref|ZP_03670291.1| flagellar basal body rod protein FlgC [Listeria monocytogenes FSL R2-561] gi|226223342|ref|YP_002757449.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes Clip81459] gi|254824009|ref|ZP_05229010.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL J1-194] gi|254829368|ref|ZP_05234055.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL N3-165] gi|254830298|ref|ZP_05234953.1| flagellar basal body rod protein FlgC [Listeria monocytogenes 10403S] gi|254900053|ref|ZP_05259977.1| flagellar basal body rod protein FlgC [Listeria monocytogenes J0161] gi|254911394|ref|ZP_05261406.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes J2818] gi|254932009|ref|ZP_05265368.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes HPB2262] gi|254935721|ref|ZP_05267418.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes F6900] gi|255022492|ref|ZP_05294478.1| flagellar basal body rod protein FlgC [Listeria monocytogenes FSL J1-208] gi|255025679|ref|ZP_05297665.1| flagellar basal body rod protein FlgC [Listeria monocytogenes FSL J2-003] gi|284801041|ref|YP_003412906.1| flagellar basal body rod protein FlgC [Listeria monocytogenes 08-5578] gi|284994183|ref|YP_003415951.1| flagellar basal body rod protein FlgC [Listeria monocytogenes 08-5923] gi|290894009|ref|ZP_06556984.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL J2-071] gi|16410100|emb|CAC98789.1| lmo0711 [Listeria monocytogenes EGD-e] gi|16413171|emb|CAC95951.1| lin0719 [Listeria innocua Clip11262] gi|46880228|gb|AAT03528.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes serotype 4b str. F2365] gi|47016348|gb|EAL07270.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes str. 1/2a F6854] gi|47019993|gb|EAL10730.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes str. 4b H7858] gi|217334461|gb|ACK40255.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes HCC23] gi|225875804|emb|CAS04507.1| Putative flagellar basal-body rod protein FlgC [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258601782|gb|EEW15107.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL N3-165] gi|258608305|gb|EEW20913.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes F6900] gi|284056603|gb|ADB67544.1| flagellar basal body rod protein FlgC [Listeria monocytogenes 08-5578] gi|284059650|gb|ADB70589.1| flagellar basal body rod protein FlgC [Listeria monocytogenes 08-5923] gi|290556455|gb|EFD89994.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL J2-071] gi|293583560|gb|EFF95592.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes HPB2262] gi|293589332|gb|EFF97666.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes J2818] gi|293593236|gb|EFG00997.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL J1-194] gi|307570250|emb|CAR83429.1| flagellar basal-body rod protein [Listeria monocytogenes L99] gi|313610106|gb|EFR85431.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL F2-208] gi|328467276|gb|EGF38356.1| flagellar basal body rod protein FlgC [Listeria monocytogenes 1816] gi|328475672|gb|EGF46421.1| flagellar basal body rod protein FlgC [Listeria monocytogenes 220] gi|332311135|gb|EGJ24230.1| Flagellar basal-body rod protein FlgC [Listeria monocytogenes str. Scott A] Length = 136 Score = 44.1 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 9/40 (22%), Positives = 21/40 (52%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 G++ +N + EM ++ + + + T+ + NEK M + Sbjct: 90 GYVNYANVDMTAEMTNLMVGQKMYAANTSALQANEKMMEK 129 Score = 39.1 bits (89), Expect = 0.62, Method: Composition-based stats. Identities = 8/30 (26%), Positives = 15/30 (50%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTD 30 M N +A A +Q + ++N++N D Sbjct: 1 MFEGINTSGSALNAAKQWMEVSSNNIANAD 30 >gi|317133492|ref|YP_004092806.1| flagellar basal-body rod protein FlgB [Ethanoligenens harbinense YUAN-3] gi|315471471|gb|ADU28075.1| flagellar basal-body rod protein FlgB [Ethanoligenens harbinense YUAN-3] Length = 125 Score = 44.1 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 40/102 (39%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 S + G A AL QR + ++DN++N DT G++ V F + + +D + S Sbjct: 9 SMDAGTKAIDALWQRSNVISDNVANADTPGYQQKSVSFEDQLSQAISDGSLSAGELDSVS 68 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGR 105 + E G+ S+ + + LTR Sbjct: 69 PQVQVESGTISSSDSNGVDMETQMVELMRNQLQYSYLTRGVS 110 >gi|254463222|ref|ZP_05076638.1| flagellar basal-body rod protein FlgC [Rhodobacterales bacterium HTCC2083] gi|206679811|gb|EDZ44298.1| flagellar basal-body rod protein FlgC [Rhodobacteraceae bacterium HTCC2083] Length = 126 Score = 44.1 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 11/31 (35%), Positives = 16/31 (51%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKF 41 A RL V++N++N DT G+ V F Sbjct: 14 GLKAQSARLRHVSENIANADTPGYHRKIVSF 44 Score = 44.1 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 5/42 (11%), Positives = 16/42 (38%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 SN + + E+ + + + ++D+ + I + Sbjct: 84 SSNVDLIIEIADAREAQRSYEANLKMLDQTRQMSSSLIELLR 125 >gi|187925764|ref|YP_001897406.1| flagellar basal body rod protein FlgB [Burkholderia phytofirmans PsJN] gi|187716958|gb|ACD18182.1| flagellar basal-body rod protein FlgB [Burkholderia phytofirmans PsJN] Length = 164 Score = 44.1 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 27/70 (38%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A R ++ N++N DT G++ V F+ + AS L+ Sbjct: 15 ALDVRAYRQELLSSNIANADTPGYKARDVDFASSLAGALKKSGSATGTAASNNATLAMTQ 74 Query: 71 GSFISTGTEL 80 + +++G + Sbjct: 75 PAGVTSGMSM 84 >gi|116872100|ref|YP_848881.1| flagellar basal body rod protein FlgC [Listeria welshimeri serovar 6b str. SLCC5334] gi|116740978|emb|CAK20098.1| flagellar basal-body rod protein FlgC [Listeria welshimeri serovar 6b str. SLCC5334] Length = 136 Score = 44.1 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 9/40 (22%), Positives = 21/40 (52%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 G++ +N + EM ++ + + + T+ + NEK M + Sbjct: 90 GYVNYANVDMTAEMTNLMVGQKMYAANTSALQANEKMMEK 129 Score = 38.7 bits (88), Expect = 0.63, Method: Composition-based stats. Identities = 8/30 (26%), Positives = 15/30 (50%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTD 30 M N +A A +Q + ++N++N D Sbjct: 1 MFEGINTSGSALNAAKQWMEVSSNNIANAD 30 >gi|157164065|ref|YP_001467063.1| flagellar basal body rod protein FlgB [Campylobacter concisus 13826] gi|112800415|gb|EAT97759.1| flagellar basal-body rod protein FlgB [Campylobacter concisus 13826] Length = 144 Score = 44.1 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 23/43 (53%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 +A E R ++ N++N DT ++ V+F +V+ N+I Sbjct: 15 SALAGRELRQKLISGNLANVDTPFYKARDVRFEDVLREKANEI 57 >gi|269138579|ref|YP_003295279.1| flagellar basal-body rod protein [Edwardsiella tarda EIB202] gi|267984239|gb|ACY84068.1| flagellar basal-body rod protein [Edwardsiella tarda EIB202] gi|304558589|gb|ADM41253.1| Flagellar basal-body rod protein FlgB [Edwardsiella tarda FL6-60] Length = 137 Score = 44.1 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 23/65 (35%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR +A N++N DT G++ + F+ + + S +A Sbjct: 15 ALNLRAQRQEILAANIANADTPGYQARDIDFASQLSRVLEQGRPDGSGIALSLTSSRHIP 74 Query: 71 GSFIS 75 + Sbjct: 75 AQTLQ 79 >gi|224417868|ref|ZP_03655874.1| flagellar hook-associated protein FlgK [Helicobacter canadensis MIT 98-5491] gi|253827207|ref|ZP_04870092.1| flagellar hook-associated protein [Helicobacter canadensis MIT 98-5491] gi|313141411|ref|ZP_07803604.1| flagellar hook-protein FlgK [Helicobacter canadensis MIT 98-5491] gi|253510613|gb|EES89272.1| flagellar hook-associated protein [Helicobacter canadensis MIT 98-5491] gi|313130442|gb|EFR48059.1| flagellar hook-protein FlgK [Helicobacter canadensis MIT 98-5491] Length = 609 Score = 44.1 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 5/67 (7%), Positives = 26/67 (38%) Query: 172 RENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENE 231 + +S ++ +++K+ + S + E+ +I +++ ++ + Sbjct: 539 KVSSQTESTQITLETKEAVYISIKQEYKAISEVSVDDELINLIKYQSGYSANAKMVSTID 598 Query: 232 KSMLEAI 238 + + + Sbjct: 599 EMLNTLL 605 Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 6/29 (20%), Positives = 14/29 (48%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTD 30 +S N + + TV++N++N + Sbjct: 5 LSSLNTPYTGLTGHQVMVDTVSNNIANAN 33 >gi|218230982|ref|YP_002366429.1| flagellar basal body rod protein FlgC [Bacillus cereus B4264] gi|218158939|gb|ACK58931.1| flagellar basal-body rod protein FlgC [Bacillus cereus B4264] Length = 137 Score = 44.1 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 7/40 (17%), Positives = 22/40 (55%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 G++ N + EM ++ + + + T++++ N+K + + Sbjct: 91 GYVRYPNIDVTAEMTNVMVAQKMYEANTSVLNANKKMLDK 130 Score = 42.5 bits (98), Expect = 0.054, Method: Composition-based stats. Identities = 5/33 (15%), Positives = 13/33 (39%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG 33 M + N + + + ++N+ N +T Sbjct: 1 MFQAINASGSGLTTARKWMEVTSNNIVNANTTA 33 >gi|116250480|ref|YP_766318.1| flagellar basal body rod protein FlgC [Rhizobium leguminosarum bv. viciae 3841] gi|115255128|emb|CAK06202.1| putative flagellar basal-body rod protein flgc (putative proximal rod protein) [Rhizobium leguminosarum bv. viciae 3841] Length = 138 Score = 44.1 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 15/101 (14%), Positives = 32/101 (31%) Query: 143 GEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDS 202 G + K I V + G+ T + + ++G ++ Sbjct: 37 DTPGADPYRRKTITFGQQMDRSNGVETVGVKKVGVDEGDFSTEFDPSNPAADQKGVVKLP 96 Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 N N + EM M + +++ I + + I + S Sbjct: 97 NVNILVEMADMREANRSYDANLQTIKQTRDLISSTIDLLKS 137 Score = 41.8 bits (96), Expect = 0.080, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 22/54 (40%), Gaps = 7/54 (12%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNT----DTVG---FRTIKVKFSEVVGAIKN 50 + I + A RL V++N++N DT G +R + F + + Sbjct: 7 AMKIAGSGLEAQSTRLRIVSENIANARSTGDTPGADPYRRKTITFGQQMDRSNG 60 >gi|74317646|ref|YP_315386.1| flagellar hook-associated protein FlgK [Thiobacillus denitrificans ATCC 25259] gi|74057141|gb|AAZ97581.1| Flagellar hook-associated protein [Thiobacillus denitrificans ATCC 25259] Length = 629 Score = 44.1 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 19/48 (39%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50 + IG +A A + LST N++N T G+ V + Sbjct: 4 SILGIGQSALAAAQAGLSTTGHNIANASTPGYSRQVVVQGAALPQNFG 51 Score = 38.7 bits (88), Expect = 0.70, Method: Composition-based stats. Identities = 4/38 (10%), Positives = 12/38 (31%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S N E ++ Q + + ++ + + Sbjct: 589 SGVNLDEEATNLLRYQQAYQAAAKVMQVASEMFDALLT 626 >gi|90422625|ref|YP_530995.1| flagellar hook-associated protein FlgK [Rhodopseudomonas palustris BisB18] gi|90104639|gb|ABD86676.1| Flagellar hook-associated protein [Rhodopseudomonas palustris BisB18] Length = 490 Score = 44.1 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 8/44 (18%), Positives = 22/44 (50%), Gaps = 3/44 (6%) Query: 202 SNANSM---YEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 SN N + EM M+ + + +++ + LI ++ + + + + Sbjct: 447 SNVNGVNMDDEMTFMLQVERTYSASSKLISAVDQMLKDLLAAVG 490 >gi|205356101|ref|ZP_03222868.1| putative flagellar hooK associated protein [Campylobacter jejuni subsp. jejuni CG8421] gi|205345944|gb|EDZ32580.1| putative flagellar hooK associated protein [Campylobacter jejuni subsp. jejuni CG8421] Length = 608 Score = 44.1 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 11/78 (14%), Positives = 23/78 (29%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 G+ A E +++T +N+SN + + +V + + Sbjct: 7 LYTGVTGLKASEVQIATTGNNISNANATFYTRQRVVQTTNGYITTGGVQVGTGTAVESIV 66 Query: 65 YLSKEVGSFISTGTELDF 82 L E + G Sbjct: 67 RLHDEYSYYKLKGASTQL 84 Score = 39.9 bits (91), Expect = 0.36, Method: Composition-based stats. Identities = 5/48 (10%), Positives = 18/48 (37%) Query: 191 GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 +V + S N+ E+ +I + + ++ ++ + + Sbjct: 557 YNSVYSEYQSKSGVNTNEELAALIQYQSSYGAAAKIVSTVDQMLDTLL 604 >gi|157415691|ref|YP_001482947.1| flagellar hook-associated protein FlgK [Campylobacter jejuni subsp. jejuni 81116] gi|157386655|gb|ABV52970.1| flagellar hook-associated protein FlgK, putative [Campylobacter jejuni subsp. jejuni 81116] gi|307748332|gb|ADN91602.1| Putative flagellar hook-associated protein FlgK [Campylobacter jejuni subsp. jejuni M1] gi|315930976|gb|EFV09951.1| flagellar hook-associated protein FlgK [Campylobacter jejuni subsp. jejuni 327] Length = 608 Score = 44.1 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 11/78 (14%), Positives = 23/78 (29%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 G+ A E +++T +N+SN + + +V + + Sbjct: 7 LYTGVTGLKASEVQIATTGNNISNANATFYTRQRVVQTTNGYITTGGVQVGTGTAVESIV 66 Query: 65 YLSKEVGSFISTGTELDF 82 L E + G Sbjct: 67 RLHDEYSYYKLKGASTQL 84 Score = 39.9 bits (91), Expect = 0.36, Method: Composition-based stats. Identities = 5/48 (10%), Positives = 18/48 (37%) Query: 191 GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 +V + S N+ E+ +I + + ++ ++ + + Sbjct: 557 YNSVYSEYQSKSGVNTNEELAALIQYQSSYGAAAKIVSTVDQMLDTLL 604 >gi|71736840|ref|YP_275566.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv. phaseolicola 1448A] gi|71557393|gb|AAZ36604.1| flagellar basal-body rod protein FlgB [Pseudomonas syringae pv. phaseolicola 1448A] Length = 135 Score = 44.1 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 30/80 (37%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + I A QR +A+N+SN DT F+ + FS V+ A + + + Sbjct: 6 DKALGIHEKALNFRAQRAEVLANNISNADTPNFKARDLDFSSVLAAQNDKVQNGHFALNK 65 Query: 62 GKEYLSKEVGSFISTGTELD 81 + G GT + Sbjct: 66 TNSRHIEAEGMGNDDGTLMY 85 >gi|86151883|ref|ZP_01070096.1| flagellar hook-associated protein FlgK, putative [Campylobacter jejuni subsp. jejuni 260.94] gi|315124902|ref|YP_004066906.1| flagellar hook-associated protein FlgK, putative [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85840991|gb|EAQ58240.1| flagellar hook-associated protein FlgK, putative [Campylobacter jejuni subsp. jejuni 260.94] gi|315018624|gb|ADT66717.1| flagellar hook-associated protein FlgK, putative [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 608 Score = 44.1 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 11/78 (14%), Positives = 23/78 (29%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 G+ A E +++T +N+SN + + +V + + Sbjct: 7 LYTGVTGLKASEVQIATTGNNISNANATFYTRQRVVQTTNGYITTGGVQVGTGTAVESIV 66 Query: 65 YLSKEVGSFISTGTELDF 82 L E + G Sbjct: 67 RLHDEYSYYKLKGASTQL 84 Score = 39.9 bits (91), Expect = 0.36, Method: Composition-based stats. Identities = 5/48 (10%), Positives = 18/48 (37%) Query: 191 GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 +V + S N+ E+ +I + + ++ ++ + + Sbjct: 557 YNSVYSEYQSKSGVNTNEELAALIQYQSSYGAAAKIVSTVDQMLDTLL 604 >gi|86149406|ref|ZP_01067637.1| flagellar hook-associated protein FlgK, putative [Campylobacter jejuni subsp. jejuni CF93-6] gi|88596766|ref|ZP_01100003.1| flagellar hook-associated protein FlgK, putative [Campylobacter jejuni subsp. jejuni 84-25] gi|218563069|ref|YP_002344848.1| flagellar hook-associated protein FlgK [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|85840188|gb|EAQ57446.1| flagellar hook-associated protein FlgK, putative [Campylobacter jejuni subsp. jejuni CF93-6] gi|88191607|gb|EAQ95579.1| flagellar hook-associated protein FlgK, putative [Campylobacter jejuni subsp. jejuni 84-25] gi|112360775|emb|CAL35574.1| putative flagellar hook-associated protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284926674|gb|ADC29026.1| flagellar hook-associated protein FlgK [Campylobacter jejuni subsp. jejuni IA3902] gi|315927413|gb|EFV06751.1| flagellar hook-associated protein FlgK [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315929004|gb|EFV08247.1| flagellar hook-associated protein FlgK [Campylobacter jejuni subsp. jejuni 305] Length = 608 Score = 44.1 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 11/78 (14%), Positives = 23/78 (29%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 G+ A E +++T +N+SN + + +V + + Sbjct: 7 LYTGVTGLKASEVQIATTGNNISNANATFYTRQRVVQTTNGYITTGGVQVGTGTAVESIV 66 Query: 65 YLSKEVGSFISTGTELDF 82 L E + G Sbjct: 67 RLHDEYSYYKLKGASTQL 84 Score = 39.9 bits (91), Expect = 0.36, Method: Composition-based stats. Identities = 5/48 (10%), Positives = 18/48 (37%) Query: 191 GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 +V + S N+ E+ +I + + ++ ++ + + Sbjct: 557 YNSVYSEYQSKSGVNTNEELAALIQYQSSYGAAAKIVSTVDQMLDTLL 604 >gi|326319501|ref|YP_004237173.1| flagellar basal body rod protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323376337|gb|ADX48606.1| flagellar basal body rod protein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 100 Score = 43.7 bits (101), Expect = 0.020, Method: Composition-based stats. Identities = 13/39 (33%), Positives = 19/39 (48%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK 49 A + +L T A N++N +T GFR V+ S V Sbjct: 11 GLRAAQLQLDTSAHNVANMNTEGFRRQTVEQSAVPDQGG 49 >gi|218133657|ref|ZP_03462461.1| hypothetical protein BACPEC_01526 [Bacteroides pectinophilus ATCC 43243] gi|217991032|gb|EEC57038.1| hypothetical protein BACPEC_01526 [Bacteroides pectinophilus ATCC 43243] Length = 131 Score = 43.7 bits (101), Expect = 0.020, Method: Composition-based stats. Identities = 9/48 (18%), Positives = 22/48 (45%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65 R + +N++N DT G++ V F + + + + S + ++ Sbjct: 23 RNEVLTNNIANVDTPGYKRKDVSFEKYLNSALEAPENPYSTLNQRVKH 70 >gi|213024454|ref|ZP_03338901.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 403 Score = 43.7 bits (101), Expect = 0.020, Method: Composition-based stats. Identities = 9/52 (17%), Positives = 23/52 (44%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+TV++N++N + G+ ++ + Sbjct: 12 MSSLINHAMSGLNAAQAALNTVSNNINNYNVAGYTRQTTILAQANSTLGAGG 63 >gi|78776565|ref|YP_392880.1| flagellar basal body rod protein FlgC [Sulfurimonas denitrificans DSM 1251] gi|78497105|gb|ABB43645.1| Flagellar basal-body rod protein FlgC [Sulfurimonas denitrificans DSM 1251] Length = 164 Score = 43.7 bits (101), Expect = 0.020, Method: Composition-based stats. Identities = 8/45 (17%), Positives = 20/45 (44%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 G++ N N + EM ++ T+ + + + ++ AI + Sbjct: 119 GYVAYPNINPVIEMADLVEATRSYQANVAAFESSKSIANSAISLL 163 Score = 42.2 bits (97), Expect = 0.072, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 6/49 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44 SF+I A R++T++ N++N T G +R +V F + Sbjct: 5 LNSFDISGYGLSAQRVRVNTISQNIANAQTTRTDEGGPYRRKEVVFKAI 53 >gi|30019789|ref|NP_831420.1| flagellar basal body rod protein FlgC [Bacillus cereus ATCC 14579] gi|29895334|gb|AAP08621.1| Flagellar basal-body rod protein flgC [Bacillus cereus ATCC 14579] Length = 137 Score = 43.7 bits (101), Expect = 0.020, Method: Composition-based stats. Identities = 7/40 (17%), Positives = 22/40 (55%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 G++ N + EM ++ + + + T++++ N+K + + Sbjct: 91 GYVRYPNIDVTAEMTNVMVAQKMYEANTSVLNANKKMLDK 130 Score = 41.8 bits (96), Expect = 0.083, Method: Composition-based stats. Identities = 5/33 (15%), Positives = 13/33 (39%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG 33 M + N + + + ++N+ N +T Sbjct: 1 MFQAINASGSGLTTARKWMQVTSNNIVNANTPA 33 >gi|296531769|ref|ZP_06894591.1| flagellar basal-body rod protein FlgC [Roseomonas cervicalis ATCC 49957] gi|296267908|gb|EFH13713.1| flagellar basal-body rod protein FlgC [Roseomonas cervicalis ATCC 49957] Length = 146 Score = 43.7 bits (101), Expect = 0.020, Method: Composition-based stats. Identities = 7/81 (8%), Positives = 21/81 (25%), Gaps = 7/81 (8%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV-------GFRTIKVKFSEVVGAIKNDIDQK 55 + + R+ A+N++N + +R + F V + Sbjct: 15 QAMATAASGMNTQATRMRVSAENIANASSTAAVPGGDAYRRKLITFDRAVDRATGAQLVR 74 Query: 56 ISFVASGKEYLSKEVGSFIST 76 + + + + Sbjct: 75 MDSIRNDPRDFRTQYDPAHPA 95 Score = 35.2 bits (79), Expect = 8.7, Method: Composition-based stats. Identities = 13/130 (10%), Positives = 40/130 (30%) Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRE 173 + +A+ + G + + K+I VR + Sbjct: 17 MATAASGMNTQATRMRVSAENIANASSTAAVPGGDAYRRKLITFDRAVDRATGAQLVRMD 76 Query: 174 NSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 + P T + +RG+++ N +++ E + + + + ++ + Sbjct: 77 SIRNDPRDFRTQYDPAHPAADERGYVKLPNVDTLVEQADLRAAGRSYEASMAVLQQARAL 136 Query: 234 MLEAIRNIAS 243 + + + S Sbjct: 137 YGKTLDILRS 146 >gi|238764389|ref|ZP_04625339.1| Flagellar basal-body rod protein flgB [Yersinia kristensenii ATCC 33638] gi|238697415|gb|EEP90182.1| Flagellar basal-body rod protein flgB [Yersinia kristensenii ATCC 33638] Length = 137 Score = 43.7 bits (101), Expect = 0.020, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 24/65 (36%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR ++ N++N DT GF+ + FS + + + V+ Sbjct: 15 ALNLRAQRQEILSSNIANADTPGFQARDIDFSSQLKKVMEQGRVNGTGVSLSLTSARHIP 74 Query: 71 GSFIS 75 S + Sbjct: 75 ASTVQ 79 >gi|269792949|ref|YP_003317853.1| flagellar basal-body rod protein FlgB [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100584|gb|ACZ19571.1| flagellar basal-body rod protein FlgB [Thermanaerovibrio acidaminovorans DSM 6589] Length = 134 Score = 43.7 bits (101), Expect = 0.020, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 26/56 (46%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLS 67 L +R+ VA N++N +T + +V F + + A+ + + V+ + + Sbjct: 14 LEGLSRRMGAVAQNVANANTPRYARREVSFEDQLAAVIDQPRRLPLAVSDQRHMTN 69 >gi|33592485|ref|NP_880129.1| flagellar hook-associated protein FlgK [Bordetella pertussis Tohama I] gi|33572131|emb|CAE41673.1| flagellar hook-associated protein 1 [Bordetella pertussis Tohama I] gi|332381902|gb|AEE66749.1| flagellar hook-associated protein FlgK [Bordetella pertussis CS] Length = 548 Score = 43.7 bits (101), Expect = 0.020, Method: Composition-based stats. Identities = 23/179 (12%), Positives = 44/179 (24%), Gaps = 3/179 (1%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 +N+ L A + L T + N++N TVG+ +V S Sbjct: 1 MNLYNLALTGLNASQAGLETTSHNINNATTVGYSRQRVITSTAGAGETGQGFFGRGVQVD 60 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 G + A + + R G S + Sbjct: 61 TVTRQYDSFLYRQLVGAQGSSAQLSTHLAQVSQVNNLFGDRTVGITPALAGLFTSTNAAA 120 Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEIS---QKGKVIATMGLYSVDMSQGFVRRENSGI 177 +V + K + + T +V+ + ++ R N Sbjct: 121 TKPADPAVRADMIGKANSLVTQINTAYQELENQRNGLNTQISTTVEQANSYLERINDLN 179 >gi|316932791|ref|YP_004107773.1| flagellar hook-associated protein FlgK [Rhodopseudomonas palustris DX-1] gi|315600505|gb|ADU43040.1| flagellar hook-associated protein FlgK [Rhodopseudomonas palustris DX-1] Length = 623 Score = 43.7 bits (101), Expect = 0.020, Method: Composition-based stats. Identities = 15/116 (12%), Positives = 38/116 (32%) Query: 126 MASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP 185 + K + + + G A Q FV ++ S + + Sbjct: 508 GDTARPDFMIKQMMNSKYYYSAATGIGSDTAPFKGSLQSYLQQFVSQQGSNAAAAKQLSE 567 Query: 186 LEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 +++ T+++ F S N EM ++ L + + ++ + ++ I Sbjct: 568 GQNVVLNTLQQKFSASSGVNMDEEMAHLLSLQNAYAANARVMSTINQMYQSLMQAI 623 Score = 38.3 bits (87), Expect = 0.86, Method: Composition-based stats. Identities = 9/37 (24%), Positives = 19/37 (51%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 + +I +A + +S V+ N++N +T G+ V Sbjct: 6 ALSIAMAGLRVNQASMSLVSSNVANAETPGYVRKTVN 42 >gi|220929471|ref|YP_002506380.1| flagellar basal-body rod protein FlgB [Clostridium cellulolyticum H10] gi|219999799|gb|ACL76400.1| flagellar basal-body rod protein FlgB [Clostridium cellulolyticum H10] Length = 137 Score = 43.7 bits (101), Expect = 0.020, Method: Composition-based stats. Identities = 11/83 (13%), Positives = 28/83 (33%), Gaps = 5/83 (6%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV-----GAIKNDIDQKISFVASGKEY 65 + A R ++ N++N DT ++ V F + + I + + Sbjct: 15 SISASWTRNEVISQNLANIDTPNYKRKDVTFEQYLNDSLDSRKLEGITTDERHIPIKSKN 74 Query: 66 LSKEVGSFISTGTELDFALEGDA 88 + K ++ ++G+ Sbjct: 75 IEKVKPEITLDNSDTSMRIDGNN 97 >gi|77165841|ref|YP_344366.1| flagellar basal-body rod protein FlgB [Nitrosococcus oceani ATCC 19707] gi|76884155|gb|ABA58836.1| Flagellar basal-body rod protein FlgB [Nitrosococcus oceani ATCC 19707] Length = 131 Score = 43.7 bits (101), Expect = 0.020, Method: Composition-based stats. Identities = 10/94 (10%), Positives = 29/94 (30%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIS 75 +R +A N++N DT G++ + F + + + A + + + Sbjct: 20 SRRAEVLAANLANGDTPGYKARDIDFKAALQQAQGQGLPLQATHAGHVSHSLGQFPGGEA 79 Query: 76 TGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109 A + + +++ + Sbjct: 80 LYRIPQQASLDGNTVDSQVEHSEFMQNALQYQAS 113 >gi|260220025|emb|CBA27150.1| hypothetical protein Csp_A00840 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 99 Score = 43.7 bits (101), Expect = 0.020, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 20/40 (50%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 M + +I L+ A + L+ A N++N T GF+ + Sbjct: 1 MNSISSIALSGLNAAQTSLNASAHNVANLATEGFKRQETV 40 >gi|317153838|ref|YP_004121886.1| flagellar hook-associated protein FlgK [Desulfovibrio aespoeensis Aspo-2] gi|316944089|gb|ADU63140.1| flagellar hook-associated protein FlgK [Desulfovibrio aespoeensis Aspo-2] Length = 711 Score = 43.7 bits (101), Expect = 0.020, Method: Composition-based stats. Identities = 6/36 (16%), Positives = 13/36 (36%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 N EM +I + + LI ++ + + Sbjct: 673 VNLDEEMSNLIRYQASYTAAAKLITTADQMLQTILS 708 Score = 39.5 bits (90), Expect = 0.39, Method: Composition-based stats. Identities = 9/73 (12%), Positives = 23/73 (31%), Gaps = 2/73 (2%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG--AIKNDIDQKISFVASGKEYLSK 68 A A + +L +N++N +T G+ E + + + + Sbjct: 15 ALFASQVQLQVTGENIANVNTEGYSRRSAILEEGPYIDYSPGQLGTGVKAKEVVRNFDEM 74 Query: 69 EVGSFISTGTELD 81 ++ + D Sbjct: 75 VESMYVGQASMRD 87 >gi|268317787|ref|YP_003291506.1| flagellar hook-associated protein FlgK [Rhodothermus marinus DSM 4252] gi|262335321|gb|ACY49118.1| flagellar hook-associated protein FlgK [Rhodothermus marinus DSM 4252] Length = 464 Score = 43.7 bits (101), Expect = 0.020, Method: Composition-based stats. Identities = 6/36 (16%), Positives = 13/36 (36%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + E+ MI Q + + ++D M + Sbjct: 428 VSLDEELTNMIRFQQAYAATARVLDTARSMMDTLLN 463 Score = 36.8 bits (83), Expect = 2.8, Method: Composition-based stats. Identities = 8/29 (27%), Positives = 16/29 (55%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEV 44 + ++TV N++N +T G+ +V V Sbjct: 18 QAAMNTVGQNVANANTEGYARRRVTLQAV 46 >gi|224534079|ref|ZP_03674662.1| flagellar hook-associated protein 1 [Borrelia burgdorferi CA-11.2a] gi|224512778|gb|EEF83146.1| flagellar hook-associated protein 1 [Borrelia burgdorferi CA-11.2a] Length = 151 Score = 43.7 bits (101), Expect = 0.020, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 16/41 (39%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E+ MI Q F + + I + + + I + Sbjct: 110 SGVNKDEELANMIEFQQAFIAASKFITVSVELIDTVINKMG 150 >gi|307945687|ref|ZP_07661023.1| flagellar hook-associated protein FlgK [Roseibium sp. TrichSKD4] gi|307771560|gb|EFO30785.1| flagellar hook-associated protein FlgK [Roseibium sp. TrichSKD4] Length = 617 Score = 43.7 bits (101), Expect = 0.020, Method: Composition-based stats. Identities = 10/48 (20%), Positives = 22/48 (45%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50 ++ N L +++L + N++N DTVG+ +V+ + Sbjct: 5 SALNNALFGVTFNQRQLDVTSQNIANKDTVGYTKKQVEANVFYDGNGG 52 Score = 37.5 bits (85), Expect = 1.8, Method: Composition-based stats. Identities = 4/35 (11%), Positives = 14/35 (40%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 + EM Q+++L + + ++ + + Sbjct: 580 VDLDEEMAQLVNLQNAYAANARVMQAVNELFDRLL 614 >gi|168333624|ref|ZP_02691884.1| flagellar hook-associated protein FlgK [Epulopiscium sp. 'N.t. morphotype B'] Length = 544 Score = 43.7 bits (101), Expect = 0.020, Method: Composition-based stats. Identities = 16/176 (9%), Positives = 42/176 (23%), Gaps = 6/176 (3%) Query: 73 FISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQ 132 + T A + + T + + + D P Sbjct: 369 YRDEDTSAIIASNDPNFDYNKMTAENFSTSLEIIESDKNIRTNYEHRMDVINDPKLDPPY 428 Query: 133 IPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGV 192 + N G + ++S ++ S + N + + Sbjct: 429 NSEIYYNPNPGNNDLLLDLMDQQNNQDVFSQGTPTDYMISIFSAMGVNASEAQMYAKTQS 488 Query: 193 TVKRGFLED-----SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 + +E+ S ++ E +I + ++ + I + S Sbjct: 489 NIISE-IENQRMAVSGVDNNEEFMNLIKYNMAYQISAKVMSTLDNIYDITINRMGS 543 Score = 43.7 bits (101), Expect = 0.021, Method: Composition-based stats. Identities = 9/39 (23%), Positives = 20/39 (51%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 + ++ A +Q LS + N++N +T G+ ++K Sbjct: 6 ITVAMSGLFAAQQGLSVTSSNINNINTPGYSRQEIKQEA 44 >gi|46578732|ref|YP_009540.1| flagellar basal body rod protein FlgB [Desulfovibrio vulgaris str. Hildenborough] gi|46448144|gb|AAS94799.1| flagellar basal-body rod protein FlgB [Desulfovibrio vulgaris str. Hildenborough] gi|311232604|gb|ADP85458.1| flagellar basal-body rod protein FlgB [Desulfovibrio vulgaris RCH1] Length = 136 Score = 43.7 bits (101), Expect = 0.020, Method: Composition-based stats. Identities = 8/39 (20%), Positives = 19/39 (48%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50 QR + V N++N T G++ +++F + + + Sbjct: 16 MDMQLQRQNVVMSNIANVRTPGYKPRELEFEKELQSALG 54 >gi|315281376|ref|ZP_07870013.1| flagellar basal-body rod protein FlgC [Listeria marthii FSL S4-120] gi|313614973|gb|EFR88480.1| flagellar basal-body rod protein FlgC [Listeria marthii FSL S4-120] Length = 136 Score = 43.7 bits (101), Expect = 0.021, Method: Composition-based stats. Identities = 9/40 (22%), Positives = 21/40 (52%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 G++ +N + EM ++ + + + T+ + NEK M + Sbjct: 90 GYVNYANVDMTAEMTNLMVGQKMYAANTSALQANEKMMEK 129 Score = 38.7 bits (88), Expect = 0.71, Method: Composition-based stats. Identities = 8/30 (26%), Positives = 15/30 (50%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTD 30 M N +A A +Q + ++N++N D Sbjct: 1 MFEGINTSGSALNAAKQWMEVSSNNIANAD 30 >gi|241761153|ref|ZP_04759242.1| flagellar basal-body rod protein FlgC [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241374772|gb|EER64233.1| flagellar basal-body rod protein FlgC [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 134 Score = 43.7 bits (101), Expect = 0.021, Method: Composition-based stats. Identities = 5/35 (14%), Positives = 16/35 (45%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 ++ EM +MI + + + ++ + L+ + Sbjct: 96 VDTAQEMVEMIETARDYQNNVQVMQTAKSLTLDTL 130 >gi|237757071|ref|ZP_04585515.1| flagellar hook-associated protein FlgK [Sulfurihydrogenibium yellowstonense SS-5] gi|237690770|gb|EEP59934.1| flagellar hook-associated protein FlgK [Sulfurihydrogenibium yellowstonense SS-5] Length = 475 Score = 43.7 bits (101), Expect = 0.021, Method: Composition-based stats. Identities = 5/36 (13%), Positives = 14/36 (38%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 N E+ + L + + + +I ++ M + Sbjct: 437 VNMDEELINLTKLQRSYQAAARIITVTDELMQTILN 472 >gi|23013291|ref|ZP_00053203.1| COG4786: Flagellar basal body rod protein [Magnetospirillum magnetotacticum MS-1] Length = 58 Score = 43.7 bits (101), Expect = 0.021, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 22/54 (40%) Query: 189 LSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 + ++ G LE SN N E+ Q+ + + + I M AI +A Sbjct: 1 GARERLEVGSLERSNVNPFTELRQVSEVAGAYQTAAARITALHDLMRTAISRLA 54 >gi|91785637|ref|YP_560843.1| flagellar basal body rod protein FlgB [Burkholderia xenovorans LB400] gi|91689591|gb|ABE32791.1| Flagellar basal-body rod protein FlgB [Burkholderia xenovorans LB400] Length = 164 Score = 43.7 bits (101), Expect = 0.021, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 26/70 (37%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A R ++ N++N DT G++ V F+ + AS L+ Sbjct: 15 ALDVRAYRQELLSSNIANADTPGYKARDVDFASSLAGALKKAGGSAGTAASNSSTLAMTQ 74 Query: 71 GSFISTGTEL 80 + ++ G + Sbjct: 75 PAGVTGGMSM 84 >gi|75761144|ref|ZP_00741136.1| Flagellar basal-body rod protein flgC [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|206970905|ref|ZP_03231857.1| flagellar basal-body rod protein FlgC [Bacillus cereus AH1134] gi|218896677|ref|YP_002445088.1| flagellar basal-body rod protein FlgC [Bacillus cereus G9842] gi|228900326|ref|ZP_04064556.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis IBL 4222] gi|228920455|ref|ZP_04083800.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228952124|ref|ZP_04114219.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228958024|ref|ZP_04119760.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis serovar pakistani str. T13001] gi|229069296|ref|ZP_04202586.1| Flagellar basal-body rod protein FlgC [Bacillus cereus F65185] gi|229078926|ref|ZP_04211478.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock4-2] gi|229109201|ref|ZP_04238800.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock1-15] gi|229127070|ref|ZP_04256069.1| Flagellar basal-body rod protein FlgC [Bacillus cereus BDRD-Cer4] gi|229149946|ref|ZP_04278174.1| Flagellar basal-body rod protein FlgC [Bacillus cereus m1550] gi|229178153|ref|ZP_04305524.1| Flagellar basal-body rod protein FlgC [Bacillus cereus 172560W] gi|229189841|ref|ZP_04316852.1| Flagellar basal-body rod protein FlgC [Bacillus cereus ATCC 10876] gi|74491372|gb|EAO54596.1| Flagellar basal-body rod protein flgC [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|206734541|gb|EDZ51711.1| flagellar basal-body rod protein FlgC [Bacillus cereus AH1134] gi|218541427|gb|ACK93821.1| flagellar basal-body rod protein FlgC [Bacillus cereus G9842] gi|228593649|gb|EEK51457.1| Flagellar basal-body rod protein FlgC [Bacillus cereus ATCC 10876] gi|228605283|gb|EEK62733.1| Flagellar basal-body rod protein FlgC [Bacillus cereus 172560W] gi|228633627|gb|EEK90228.1| Flagellar basal-body rod protein FlgC [Bacillus cereus m1550] gi|228656423|gb|EEL12262.1| Flagellar basal-body rod protein FlgC [Bacillus cereus BDRD-Cer4] gi|228674211|gb|EEL29456.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock1-15] gi|228704340|gb|EEL56774.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock4-2] gi|228713783|gb|EEL65668.1| Flagellar basal-body rod protein FlgC [Bacillus cereus F65185] gi|228801649|gb|EEM48530.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis serovar pakistani str. T13001] gi|228807656|gb|EEM54180.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228839085|gb|EEM84381.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228859361|gb|EEN03791.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis IBL 4222] Length = 137 Score = 43.7 bits (101), Expect = 0.021, Method: Composition-based stats. Identities = 7/40 (17%), Positives = 22/40 (55%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 G++ N + EM ++ + + + T++++ N+K + + Sbjct: 91 GYVRYPNIDVTAEMTNVMVAQKMYEANTSVLNANKKMLDK 130 Score = 42.2 bits (97), Expect = 0.057, Method: Composition-based stats. Identities = 5/33 (15%), Positives = 13/33 (39%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG 33 M + N + + + ++N+ N +T Sbjct: 1 MFQAINASGSGLTTARKWMEVTSNNIVNANTTA 33 >gi|22127330|ref|NP_670753.1| flagellar basal body rod protein FlgC [Yersinia pestis KIM 10] gi|45442794|ref|NP_994333.1| flagellar basal body rod protein FlgC [Yersinia pestis biovar Microtus str. 91001] gi|51597639|ref|YP_071830.1| flagellar basal body rod protein FlgC [Yersinia pseudotuberculosis IP 32953] gi|108809057|ref|YP_652973.1| flagellar basal body rod protein FlgC [Yersinia pestis Antiqua] gi|108810746|ref|YP_646513.1| flagellar basal body rod protein FlgC [Yersinia pestis Nepal516] gi|145597815|ref|YP_001161891.1| flagellar basal body rod protein FlgC [Yersinia pestis Pestoides F] gi|150260251|ref|ZP_01916979.1| lateral flagellar rod protein [Yersinia pestis CA88-4125] gi|162418952|ref|YP_001604849.1| flagellar basal body rod protein FlgC [Yersinia pestis Angola] gi|165924966|ref|ZP_02220798.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar Orientalis str. F1991016] gi|165939065|ref|ZP_02227617.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar Orientalis str. IP275] gi|166008997|ref|ZP_02229895.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar Antiqua str. E1979001] gi|166212219|ref|ZP_02238254.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar Antiqua str. B42003004] gi|167398642|ref|ZP_02304166.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167418994|ref|ZP_02310747.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425145|ref|ZP_02316898.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167466343|ref|ZP_02331047.1| flagellar basal-body rod protein FlgC [Yersinia pestis FV-1] gi|170022969|ref|YP_001719474.1| flagellar basal body rod protein FlgC [Yersinia pseudotuberculosis YPIII] gi|186896773|ref|YP_001873885.1| flagellar basal body rod protein FlgC [Yersinia pseudotuberculosis PB1/+] gi|218927910|ref|YP_002345785.1| flagellar basal body rod protein FlgC [Yersinia pestis CO92] gi|229837406|ref|ZP_04457569.1| Flagellar basal-body rod protein flgC [Yersinia pestis Pestoides A] gi|229840619|ref|ZP_04460778.1| Flagellar basal-body rod protein flgC [Yersinia pestis biovar Orientalis str. PEXU2] gi|229842830|ref|ZP_04462982.1| Flagellar basal-body rod protein flgC [Yersinia pestis biovar Orientalis str. India 195] gi|229900943|ref|ZP_04516067.1| Flagellar basal-body rod protein flgC [Yersinia pestis Nepal516] gi|270487675|ref|ZP_06204749.1| flagellar basal-body rod protein FlgC [Yersinia pestis KIM D27] gi|294502786|ref|YP_003566848.1| flagellar basal body rod protein [Yersinia pestis Z176003] gi|21960411|gb|AAM87004.1|AE013948_12 flagellar biosynthesis protein, cell-proximal portion of basal-body rod [Yersinia pestis KIM 10] gi|45437660|gb|AAS63210.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar Microtus str. 91001] gi|51590921|emb|CAH22577.1| Putative flagellar basal-body rod protein [Yersinia pseudotuberculosis IP 32953] gi|108774394|gb|ABG16913.1| flagellar basal-body rod protein [Yersinia pestis Nepal516] gi|108780970|gb|ABG15028.1| putative flagellar basal-body rod protein [Yersinia pestis Antiqua] gi|115346521|emb|CAL19397.1| putative flagellar basal-body rod protein [Yersinia pestis CO92] gi|145209511|gb|ABP38918.1| flagellar basal-body rod protein [Yersinia pestis Pestoides F] gi|149289659|gb|EDM39736.1| lateral flagellar rod protein [Yersinia pestis CA88-4125] gi|162351767|gb|ABX85715.1| flagellar basal-body rod protein FlgC [Yersinia pestis Angola] gi|165913021|gb|EDR31646.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar Orientalis str. IP275] gi|165923166|gb|EDR40317.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar Orientalis str. F1991016] gi|165992336|gb|EDR44637.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar Antiqua str. E1979001] gi|166206965|gb|EDR51445.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar Antiqua str. B42003004] gi|166962988|gb|EDR59009.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051146|gb|EDR62554.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167055908|gb|EDR65689.1| flagellar basal-body rod protein FlgC [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169749503|gb|ACA67021.1| flagellar basal-body rod protein FlgC [Yersinia pseudotuberculosis YPIII] gi|186699799|gb|ACC90428.1| flagellar basal-body rod protein FlgC [Yersinia pseudotuberculosis PB1/+] gi|229682282|gb|EEO78374.1| Flagellar basal-body rod protein flgC [Yersinia pestis Nepal516] gi|229690097|gb|EEO82154.1| Flagellar basal-body rod protein flgC [Yersinia pestis biovar Orientalis str. India 195] gi|229696985|gb|EEO87032.1| Flagellar basal-body rod protein flgC [Yersinia pestis biovar Orientalis str. PEXU2] gi|229705529|gb|EEO91539.1| Flagellar basal-body rod protein flgC [Yersinia pestis Pestoides A] gi|262360818|gb|ACY57539.1| flagellar basal body rod protein [Yersinia pestis D106004] gi|270336179|gb|EFA46956.1| flagellar basal-body rod protein FlgC [Yersinia pestis KIM D27] gi|294353245|gb|ADE63586.1| flagellar basal body rod protein [Yersinia pestis Z176003] gi|320016713|gb|ADW00285.1| Flagellar basal-body rod protein flgC [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 141 Score = 43.7 bits (101), Expect = 0.021, Method: Composition-based stats. Identities = 9/47 (19%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 +G++ N + EM M+ ++ F + +++ KSM +++ + Sbjct: 94 QGYVFYPAVNVVSEMADMMSASRSFETNVEVLNSV-KSMQQSVLKLG 139 Score = 38.7 bits (88), Expect = 0.67, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 30/91 (32%), Gaps = 6/91 (6%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKISFVA 60 + +A A RL+T+A N++N ++ ++ FS V A + + Sbjct: 9 VAGSAMTAQTIRLNTIASNLANAESPAASAATVYKARSPVFSAVYSARTAADPRGVQSAQ 68 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFA 91 + + GS A F Sbjct: 69 VQVLDVVEVGGSVQRYEPNHPMANPQGYVFY 99 >gi|207108977|ref|ZP_03243139.1| flagellar hook protein FlgE [Helicobacter pylori HPKX_438_CA4C1] Length = 40 Score = 43.7 bits (101), Expect = 0.021, Method: Composition-based stats. Identities = 6/40 (15%), Positives = 21/40 (52%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 M + + + + ++++N++N +T+G+R+ + Sbjct: 1 MNDTLLNAYSGIKTHQFGIDSLSNNIANVNTLGYRSNDPE 40 >gi|170694389|ref|ZP_02885543.1| flagellar basal-body rod protein FlgB [Burkholderia graminis C4D1M] gi|170140812|gb|EDT08986.1| flagellar basal-body rod protein FlgB [Burkholderia graminis C4D1M] Length = 163 Score = 43.7 bits (101), Expect = 0.021, Method: Composition-based stats. Identities = 11/73 (15%), Positives = 23/73 (31%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A R ++ N++N DT G++ V F+ + ++ + Sbjct: 15 ALDVRAYRQELLSSNIANADTPGYKARDVDFASSLAGALKKTGAAGHTASNTATLPLAQP 74 Query: 71 GSFISTGTELDFA 83 S + A Sbjct: 75 AGVTSGMSMAATA 87 >gi|120613370|ref|YP_973048.1| flagellar basal body rod protein [Acidovorax citrulli AAC00-1] gi|120591834|gb|ABM35274.1| flagellar basal body rod protein [Acidovorax citrulli AAC00-1] Length = 100 Score = 43.7 bits (101), Expect = 0.021, Method: Composition-based stats. Identities = 13/39 (33%), Positives = 19/39 (48%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK 49 A + +L T A N++N +T GFR V+ S V Sbjct: 11 GLRAAQLQLDTSAHNVANMNTEGFRRQTVEQSAVPDQGG 49 >gi|253575863|ref|ZP_04853197.1| flagellar hook-associated protein FlgK [Paenibacillus sp. oral taxon 786 str. D14] gi|251844657|gb|EES72671.1| flagellar hook-associated protein FlgK [Paenibacillus sp. oral taxon 786 str. D14] Length = 523 Score = 43.7 bits (101), Expect = 0.021, Method: Composition-based stats. Identities = 7/41 (17%), Positives = 17/41 (41%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S + E+ MI Q +N+ + ++ + I ++ Sbjct: 479 SGVSMDEELADMIRFQQAYNAAARNMTVVDEMLDRVINSMG 519 Score = 37.2 bits (84), Expect = 2.0, Method: Composition-based stats. Identities = 15/114 (13%), Positives = 31/114 (27%), Gaps = 1/114 (0%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 A + T+ N++N +T G+ +V +E + + G Sbjct: 7 GIETSKRALFVNTVSMQTLGHNIANANTEGYTRQRVNLTEANPIWAMGMTKSAQPGQLGT 66 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSA 117 + T + F + +T G+ +SA Sbjct: 67 GVEYTSITRVRDTFLDTQFR-RENQMLGSWEVLNSSMTAIQNIINEPSGNGLSA 119 >gi|237751406|ref|ZP_04581886.1| flagellar hook-associated protein FlgK [Helicobacter bilis ATCC 43879] gi|229372772|gb|EEO23163.1| flagellar hook-associated protein FlgK [Helicobacter bilis ATCC 43879] Length = 606 Score = 43.7 bits (101), Expect = 0.021, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 14/37 (37%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S + EM +I + + +I ++ + + Sbjct: 566 SQVSVDEEMVNLIKFQGGYAANAKVITTIDRMIETLL 602 Score = 41.8 bits (96), Expect = 0.075, Method: Composition-based stats. Identities = 4/29 (13%), Positives = 11/29 (37%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTD 30 +S + A + + +N++N Sbjct: 5 LSSLHTSTTGLHAHQLMVDVTGNNIANAS 33 >gi|228907377|ref|ZP_04071235.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis IBL 200] gi|228852238|gb|EEM97034.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis IBL 200] Length = 137 Score = 43.7 bits (101), Expect = 0.021, Method: Composition-based stats. Identities = 7/40 (17%), Positives = 22/40 (55%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 G++ N + EM ++ + + + T++++ N+K + + Sbjct: 91 GYVRYPNIDVTAEMTNVMVAQKMYEANTSVLNANKKMLDK 130 Score = 42.2 bits (97), Expect = 0.058, Method: Composition-based stats. Identities = 5/33 (15%), Positives = 13/33 (39%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG 33 M + N + + + ++N+ N +T Sbjct: 1 MFQAINASGSGLTTARKWMEVTSNNIVNANTTA 33 >gi|161614593|ref|YP_001588558.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|161363957|gb|ABX67725.1| hypothetical protein SPAB_02343 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 553 Score = 43.7 bits (101), Expect = 0.021, Method: Composition-based stats. Identities = 9/52 (17%), Positives = 23/52 (44%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+TV++N++N + G+ ++ + Sbjct: 1 MSSLINHAMSGLNAAQAALNTVSNNINNYNVAGYTRQTTILAQANSTLGAGG 52 >gi|168699687|ref|ZP_02731964.1| probable flagellar hook-associated protein [Gemmata obscuriglobus UQM 2246] Length = 562 Score = 43.7 bits (101), Expect = 0.021, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 20/40 (50%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 M S+ IG +A ++ L + N++N T G+ + + Sbjct: 1 MTNSYAIGTSAIATAQKALDLIGQNVANATTPGYHRVDPQ 40 >gi|83814873|ref|YP_446719.1| flagella basal body rod protein [Salinibacter ruber DSM 13855] gi|83756267|gb|ABC44380.1| Flagella basal body rod protein [Salinibacter ruber DSM 13855] Length = 137 Score = 43.7 bits (101), Expect = 0.021, Method: Composition-based stats. Identities = 12/71 (16%), Positives = 24/71 (33%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69 A A QR + N++N DT G+ + V F E + ++ + ++ Sbjct: 36 NAMSAYAQRRRAASSNLANIDTPGYDRMSVSFEEELQDVRRHSGSLREQSEVEPDTEVED 95 Query: 70 VGSFISTGTEL 80 + Sbjct: 96 EAPVLEEELMT 106 >gi|162147439|ref|YP_001601900.1| flagellar basal body rod protein FlgC [Gluconacetobacter diazotrophicus PAl 5] gi|161786016|emb|CAP55598.1| putative flagellar basal-body rod protein flgC [Gluconacetobacter diazotrophicus PAl 5] Length = 135 Score = 43.7 bits (101), Expect = 0.021, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 25/77 (32%), Gaps = 7/77 (9%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQKISFV 59 + A A E+RL A+N++N DT G +R + F + K+ + Sbjct: 9 VSAAGMRAQEERLRVAAENLANKDTTGSTRGADPYRRKTITFQATLDQASGVSSVKVKGI 68 Query: 60 ASGKEYLSKEVGSFIST 76 + Sbjct: 69 GQDNTPFQTKYDPSHPA 85 Score = 37.5 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 8/45 (17%), Positives = 16/45 (35%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 G+++ N NSM E+ + + + + I I Sbjct: 90 GYVKMPNVNSMVEIMDTHEAQHSYEANLNTMQISRSMATRTINLI 134 >gi|226314925|ref|YP_002774821.1| flagellar hook-associated protein 1 [Brevibacillus brevis NBRC 100599] gi|226097875|dbj|BAH46317.1| flagellar hook-associated protein 1 [Brevibacillus brevis NBRC 100599] Length = 495 Score = 43.7 bits (101), Expect = 0.022, Method: Composition-based stats. Identities = 5/41 (12%), Positives = 18/41 (43%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S + EM +M+ +++ ++ ++ + + I + Sbjct: 451 SGVSIDDEMAEMVKYQHAYSASARVMTSMDEILDKVINGMG 491 Score = 42.2 bits (97), Expect = 0.067, Method: Composition-based stats. Identities = 9/40 (22%), Positives = 16/40 (40%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 + A + L+T N+SN +T G+ +V Sbjct: 7 GIEVSKRGLFAQQSALNTTGHNISNANTEGYSRQRVNMQA 46 >gi|194468525|ref|ZP_03074509.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194454889|gb|EDX43728.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] Length = 553 Score = 43.7 bits (101), Expect = 0.022, Method: Composition-based stats. Identities = 9/52 (17%), Positives = 23/52 (44%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+TV++N++N + G+ ++ + Sbjct: 1 MSSLINHAMSGLNAAQAALNTVSNNINNYNVAGYTRQTTILAQANSTLGAGG 52 >gi|15612112|ref|NP_223764.1| flagellar hook-associated protein FlgK [Helicobacter pylori J99] gi|4155652|gb|AAD06640.1| FLAGELLAR HOOK-ASSOCIATED PROTEIN 1 (HAP1) [Helicobacter pylori J99] Length = 606 Score = 43.7 bits (101), Expect = 0.022, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 18/52 (34%), Gaps = 8/52 (15%) Query: 195 KRGFLED--------SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 K+ LE S + EM +I + + +I ++ + + Sbjct: 551 KQSMLETIKKEQLSISQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLL 602 Score = 38.7 bits (88), Expect = 0.69, Method: Composition-based stats. Identities = 6/29 (20%), Positives = 11/29 (37%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTD 30 +S N A + + +N+SN Sbjct: 5 LSSLNTSYTGLQAHQSMVDVTGNNISNAS 33 >gi|317014505|gb|ADU81941.1| flagellar hook-associated protein FlgK [Helicobacter pylori Gambia94/24] Length = 606 Score = 43.7 bits (101), Expect = 0.022, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 18/52 (34%), Gaps = 8/52 (15%) Query: 195 KRGFLED--------SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 K+ LE S + EM +I + + +I ++ + + Sbjct: 551 KQSMLETIKKEQLSISQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLL 602 Score = 38.7 bits (88), Expect = 0.69, Method: Composition-based stats. Identities = 6/29 (20%), Positives = 11/29 (37%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTD 30 +S N A + + +N+SN Sbjct: 5 LSSLNTSYTGLQAHQSMVDVTGNNISNAS 33 >gi|296534151|ref|ZP_06896647.1| probable flagellar basal-body rod protein FlgB [Roseomonas cervicalis ATCC 49957] gi|296265527|gb|EFH11656.1| probable flagellar basal-body rod protein FlgB [Roseomonas cervicalis ATCC 49957] Length = 129 Score = 43.7 bits (101), Expect = 0.022, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 25/76 (32%), Gaps = 3/76 (3%) Query: 8 GLAAQLA--LEQRLSTVADNMSNTDTVGFR-TIKVKFSEVVGAIKNDIDQKISFVASGKE 64 LA Q LEQR +A N++N +T GF+ F +V+ + + Sbjct: 10 ALAGQRLNWLEQRQKVLAQNIANANTPGFQPRDLQAFEQVLERAGANAPLARTDARHIPA 69 Query: 65 YLSKEVGSFISTGTEL 80 + Sbjct: 70 RNEMQGRPDRKVSERS 85 >gi|149911705|ref|ZP_01900313.1| flagellar basal body protein [Moritella sp. PE36] gi|149805235|gb|EDM65252.1| flagellar basal body protein [Moritella sp. PE36] Length = 131 Score = 43.7 bits (101), Expect = 0.022, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 19/38 (50%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 E+R +A N++N DT GF+ + F + + + Sbjct: 20 ERRAEVLASNIANADTPGFKARDLSFKDALASATQGSS 57 >gi|153949008|ref|YP_001399632.1| flagellar basal body rod protein FlgC [Yersinia pseudotuberculosis IP 31758] gi|152960503|gb|ABS47964.1| flagellar basal-body rod protein FlgC [Yersinia pseudotuberculosis IP 31758] Length = 141 Score = 43.7 bits (101), Expect = 0.022, Method: Composition-based stats. Identities = 9/47 (19%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 +G++ N + EM M+ ++ F + +++ KSM +++ + Sbjct: 94 QGYVFYPAVNVVSEMADMMSASRSFETNVEVLNSV-KSMQQSVLKLG 139 Score = 39.9 bits (91), Expect = 0.33, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 30/91 (32%), Gaps = 6/91 (6%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKISFVA 60 + +A A RL+T+A N++N ++ ++ FS V A Q I Sbjct: 9 VAGSAMTAQTIRLNTIASNLANAESPAASAATVYKARSPVFSAVYSARAETEPQGIQSAQ 68 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFA 91 + + GS A F Sbjct: 69 VQVLDVVEVGGSVQRYEPNHPMANPQGYVFY 99 >gi|330502731|ref|YP_004379600.1| flagellar basal body rod protein FlgB [Pseudomonas mendocina NK-01] gi|328917017|gb|AEB57848.1| flagellar basal body rod protein FlgB [Pseudomonas mendocina NK-01] Length = 135 Score = 43.7 bits (101), Expect = 0.022, Method: Composition-based stats. Identities = 9/60 (15%), Positives = 23/60 (38%) Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76 QR +++N++N DT ++ + F+ V+ + + + + G Sbjct: 21 QRAEVLSNNIANADTPNYKARDLDFASVLAEQNSRMQRGGVALNRTDSRHIPADGVNSGE 80 >gi|310767296|gb|ADP12246.1| flagellar hook-associated protein FlgK [Erwinia sp. Ejp617] Length = 551 Score = 43.7 bits (101), Expect = 0.022, Method: Composition-based stats. Identities = 8/51 (15%), Positives = 19/51 (37%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51 M N ++ A L+T ++N++N G+ ++ + Sbjct: 1 MSNLINTAMSGLSASSAALNTTSNNITNYAVTGYSRQTTVLNQSASTLSGG 51 >gi|157147104|ref|YP_001454423.1| flagellar basal body rod protein FlgC [Citrobacter koseri ATCC BAA-895] gi|157084309|gb|ABV13987.1| hypothetical protein CKO_02881 [Citrobacter koseri ATCC BAA-895] Length = 141 Score = 43.7 bits (101), Expect = 0.022, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 20/43 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ + N + EM M+ ++ F + +++ + +R Sbjct: 95 GYVYYPDVNVVEEMADMMSASRGFETNVDVLNSVKSMQQSLLR 137 Score = 38.3 bits (87), Expect = 0.99, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 22/45 (48%), Gaps = 6/45 (13%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVV 45 + +A A RL+T+A N++N +T ++ + F+ V Sbjct: 9 VSGSAMTAQTVRLNTIASNLANAETASATEDGVYKARRPVFAAVY 53 >gi|229043498|ref|ZP_04191208.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH676] gi|229144356|ref|ZP_04272762.1| Flagellar basal-body rod protein FlgC [Bacillus cereus BDRD-ST24] gi|296502344|ref|YP_003664044.1| flagellar basal body rod protein FlgC [Bacillus thuringiensis BMB171] gi|228639143|gb|EEK95567.1| Flagellar basal-body rod protein FlgC [Bacillus cereus BDRD-ST24] gi|228725876|gb|EEL77123.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH676] gi|296323396|gb|ADH06324.1| flagellar basal body rod protein FlgC [Bacillus thuringiensis BMB171] Length = 137 Score = 43.7 bits (101), Expect = 0.022, Method: Composition-based stats. Identities = 7/40 (17%), Positives = 22/40 (55%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 G++ N + EM ++ + + + T++++ N+K + + Sbjct: 91 GYVRYPNIDVTAEMTNVMVAQKMYEANTSVLNANKKMLDK 130 Score = 42.2 bits (97), Expect = 0.058, Method: Composition-based stats. Identities = 5/33 (15%), Positives = 13/33 (39%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG 33 M + N + + + ++N+ N +T Sbjct: 1 MFQAINASGSGLTTARKWMEVTSNNIVNANTTA 33 >gi|66046710|ref|YP_236551.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv. syringae B728a] gi|63257417|gb|AAY38513.1| Flagellar basal-body rod protein FlgB [Pseudomonas syringae pv. syringae B728a] gi|320329349|gb|EFW85342.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv. glycinea str. race 4] gi|330880519|gb|EGH14668.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv. glycinea str. race 4] gi|330889088|gb|EGH21749.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv. mori str. 301020] gi|330953718|gb|EGH53978.1| flagellar basal body rod protein FlgB [Pseudomonas syringae Cit 7] gi|330972410|gb|EGH72476.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv. aceris str. M302273PT] gi|330986465|gb|EGH84568.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv. lachrymans str. M301315] Length = 135 Score = 43.7 bits (101), Expect = 0.022, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 30/80 (37%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + I A QR +A+N+SN DT F+ + FS V+ A + + + Sbjct: 6 DKALGIHEKALNFRAQRAEVLANNISNADTPNFKARDLDFSSVLAAENDKVQNGHFALNK 65 Query: 62 GKEYLSKEVGSFISTGTELD 81 + G GT + Sbjct: 66 TNSRHIEAEGMGNDDGTLMY 85 >gi|316936688|gb|ADU60340.1| FlgB [Salmonella enterica subsp. enterica serovar Typhimurium] Length = 87 Score = 43.7 bits (101), Expect = 0.022, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 26/66 (39%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR +A N++N DT G++ + F+ + + ++ VA Sbjct: 9 ALNLRAQRQEILAANIANADTPGYQARDIDFASELKKVMVRGREETGGVALTLTSSHHIP 68 Query: 71 GSFIST 76 +S+ Sbjct: 69 AQAVSS 74 >gi|313624695|gb|EFR94652.1| flagellar basal-body rod protein FlgC [Listeria innocua FSL J1-023] Length = 136 Score = 43.7 bits (101), Expect = 0.022, Method: Composition-based stats. Identities = 9/40 (22%), Positives = 21/40 (52%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 G++ +N + EM ++ + + + T+ + NEK M + Sbjct: 90 GYVNYANVDMTAEMTNLMVGQKMYAANTSALQANEKMMEK 129 Score = 38.7 bits (88), Expect = 0.75, Method: Composition-based stats. Identities = 8/30 (26%), Positives = 15/30 (50%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTD 30 M N +A A +Q + ++N++N D Sbjct: 1 MFEGINTSGSALNAAKQWMEVSSNNIANAD 30 >gi|167553029|ref|ZP_02346779.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205322438|gb|EDZ10277.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 553 Score = 43.7 bits (101), Expect = 0.022, Method: Composition-based stats. Identities = 9/52 (17%), Positives = 23/52 (44%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+TV++N++N + G+ ++ + Sbjct: 1 MSSLINHAMSGLNAAQAALNTVSNNINNYNVAGYTRQTTILAQANSTLGAGG 52 >gi|16760059|ref|NP_455676.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16764539|ref|NP_460154.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29142170|ref|NP_805512.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56413830|ref|YP_150905.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62179700|ref|YP_216117.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|167994047|ref|ZP_02575139.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168234109|ref|ZP_02659167.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168237266|ref|ZP_02662324.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168244782|ref|ZP_02669714.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168264024|ref|ZP_02685997.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168467136|ref|ZP_02700978.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168822627|ref|ZP_02834627.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194442729|ref|YP_002040437.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194448239|ref|YP_002045182.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194736355|ref|YP_002114182.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197249622|ref|YP_002146860.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197362753|ref|YP_002142390.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198241785|ref|YP_002215954.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200390530|ref|ZP_03217141.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|207857309|ref|YP_002243960.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213051794|ref|ZP_03344672.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213648932|ref|ZP_03378985.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213865497|ref|ZP_03387616.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|224584313|ref|YP_002638111.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238910997|ref|ZP_04654834.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289828575|ref|ZP_06546400.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|61224025|sp|P0A1J5|FLGK_SALTY RecName: Full=Flagellar hook-associated protein 1; Short=HAP1 gi|61224026|sp|P0A1J6|FLGK_SALTI RecName: Full=Flagellar hook-associated protein 1; Short=HAP1 gi|25300786|pir||AH0640 flagellar hook-associated protein 1 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|47679|emb|CAA36025.1| HAP1 (AA 1-553) [Salmonella enterica subsp. enterica serovar Typhimurium] gi|16419700|gb|AAL20113.1| hook-filament junction protein 1 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16502353|emb|CAD08307.1| flagellar hook-associated protein 1 [Salmonella enterica subsp. enterica serovar Typhi] gi|29137800|gb|AAO69361.1| flagellar hook-associated protein 1 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56128087|gb|AAV77593.1| flagellar hook-associated protein 1 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62127333|gb|AAX65036.1| flagellar biosynthesis, hook-filament junction protein 1 [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|194401392|gb|ACF61614.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194406543|gb|ACF66762.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194711857|gb|ACF91078.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195630439|gb|EDX49065.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197094230|emb|CAR59735.1| flagellar hook-associated protein 1 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197213325|gb|ACH50722.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197289876|gb|EDY29237.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197936301|gb|ACH73634.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199602975|gb|EDZ01521.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205328045|gb|EDZ14809.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205331904|gb|EDZ18668.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205336421|gb|EDZ23185.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205341046|gb|EDZ27810.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205347332|gb|EDZ33963.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206709112|emb|CAR33445.1| flagellar hook-associated protein 1 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224468840|gb|ACN46670.1| flagellar hook-associated protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261246394|emb|CBG24203.1| flagellar hook-associated protein 1 [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267992957|gb|ACY87842.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157724|emb|CBW17216.1| flagellar hook-associated protein 1 [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312912170|dbj|BAJ36144.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320086377|emb|CBY96150.1| Flagellar hook-associated protein 1 HAP1 [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321223801|gb|EFX48864.1| Flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322616553|gb|EFY13462.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322620506|gb|EFY17370.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622500|gb|EFY19345.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629651|gb|EFY26426.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322632629|gb|EFY29375.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636876|gb|EFY33579.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641586|gb|EFY38224.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322646487|gb|EFY42997.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650024|gb|EFY46442.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653949|gb|EFY50272.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322663339|gb|EFY59541.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322670073|gb|EFY66213.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674863|gb|EFY70954.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676667|gb|EFY72734.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682589|gb|EFY78608.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686658|gb|EFY82637.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322714170|gb|EFZ05741.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323129453|gb|ADX16883.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323195772|gb|EFZ80948.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198336|gb|EFZ83440.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204842|gb|EFZ89836.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323209183|gb|EFZ94120.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323213433|gb|EFZ98229.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217857|gb|EGA02572.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323222145|gb|EGA06529.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323224917|gb|EGA09175.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229659|gb|EGA13782.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323232884|gb|EGA16980.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240619|gb|EGA24661.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323242933|gb|EGA26954.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323250251|gb|EGA34140.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323252625|gb|EGA36463.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323258847|gb|EGA42500.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323261036|gb|EGA44629.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266945|gb|EGA50430.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323269986|gb|EGA53435.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326623702|gb|EGE30047.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|332988074|gb|AEF07057.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 553 Score = 43.7 bits (101), Expect = 0.023, Method: Composition-based stats. Identities = 9/52 (17%), Positives = 23/52 (44%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+TV++N++N + G+ ++ + Sbjct: 1 MSSLINHAMSGLNAAQAALNTVSNNINNYNVAGYTRQTTILAQANSTLGAGG 52 >gi|330972421|gb|EGH72487.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv. aceris str. M302273PT] Length = 686 Score = 43.7 bits (101), Expect = 0.023, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 35/97 (36%), Gaps = 1/97 (1%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + +IGL+ A ++T+ +N +N DT G+ +V + I + Sbjct: 1 MSLISIGLSGINASSAAINTIGNNTANVDTAGYSRQQVL-TTASAQIALGQGVGYIGTGT 59 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98 + + S++ T + AL DA Sbjct: 60 TLSDVRRIYNSYLDTQLQSSTALSADAVAYSGQASKT 96 >gi|254853085|ref|ZP_05242433.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL R2-503] gi|255521221|ref|ZP_05388458.1| flagellar basal body rod protein FlgC [Listeria monocytogenes FSL J1-175] gi|300764524|ref|ZP_07074517.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL N1-017] gi|258606433|gb|EEW19041.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL R2-503] gi|300514878|gb|EFK41932.1| flagellar basal-body rod protein FlgC [Listeria monocytogenes FSL N1-017] Length = 136 Score = 43.7 bits (101), Expect = 0.023, Method: Composition-based stats. Identities = 9/40 (22%), Positives = 21/40 (52%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 G++ +N + EM ++ + + + T+ + NEK M + Sbjct: 90 GYVNYANVDMTAEMTNLMVGQKMYAANTSALQANEKMMEK 129 Score = 38.7 bits (88), Expect = 0.76, Method: Composition-based stats. Identities = 8/30 (26%), Positives = 15/30 (50%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTD 30 M N +A A +Q + ++N++N D Sbjct: 1 MFEGINTSGSALNAAKQWMEVSSNNIANAD 30 >gi|33596145|ref|NP_883788.1| flagellar hook-associated protein FlgK [Bordetella parapertussis 12822] gi|33601547|ref|NP_889107.1| flagellar hook-associated protein FlgK [Bordetella bronchiseptica RB50] gi|33573148|emb|CAE36796.1| flagellar hook-associated protein 1 [Bordetella parapertussis] gi|33575983|emb|CAE33062.1| flagellar hook-associated protein 1 [Bordetella bronchiseptica RB50] Length = 548 Score = 43.7 bits (101), Expect = 0.023, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 25/68 (36%), Gaps = 1/68 (1%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 +N+ L A + L T + N++N TVG+ +V + GA + V Sbjct: 1 MNLYNLALTGLNASQAGLETTSHNINNATTVGYSRQRVI-TSTAGAGETGQGFFGRGVQV 59 Query: 62 GKEYLSKE 69 + Sbjct: 60 DTVTRQYD 67 >gi|330943214|gb|EGH45621.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv. pisi str. 1704B] Length = 686 Score = 43.7 bits (101), Expect = 0.023, Method: Composition-based stats. Identities = 11/38 (28%), Positives = 21/38 (55%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39 + +IGL+ A ++T+ +N +N DT G+ +V Sbjct: 1 MSLISIGLSGINASSAAINTIGNNTANVDTAGYSRQQV 38 >gi|317153715|ref|YP_004121763.1| flagellar basal-body rod protein FlgB [Desulfovibrio aespoeensis Aspo-2] gi|316943966|gb|ADU63017.1| flagellar basal-body rod protein FlgB [Desulfovibrio aespoeensis Aspo-2] Length = 136 Score = 43.7 bits (101), Expect = 0.023, Method: Composition-based stats. Identities = 11/65 (16%), Positives = 22/65 (33%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTG 77 R + V N+SN DT ++ +++F + + N + + Sbjct: 22 RQNVVMGNISNVDTPEYKARRLEFEDKLQQALNHDARGKMTRTQQSHLPAVFNADGFQGD 81 Query: 78 TELDF 82 DF Sbjct: 82 GIKDF 86 >gi|307637788|gb|ADN80238.1| Flagellar hook-associated protein [Helicobacter pylori 908] gi|325996386|gb|ADZ51791.1| Flagellar hook-associated protein [Helicobacter pylori 2018] gi|325997974|gb|ADZ50182.1| Flagellar hook-associated protein [Helicobacter pylori 2017] Length = 606 Score = 43.7 bits (101), Expect = 0.023, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 18/52 (34%), Gaps = 8/52 (15%) Query: 195 KRGFLED--------SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 K+ LE S + EM +I + + +I ++ + + Sbjct: 551 KQSMLETIKKEQLSISQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLL 602 Score = 38.7 bits (88), Expect = 0.74, Method: Composition-based stats. Identities = 6/29 (20%), Positives = 11/29 (37%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTD 30 +S N A + + +N+SN Sbjct: 5 LSSLNTSYTGLQAHQSMVDVTGNNISNAS 33 >gi|315498435|ref|YP_004087239.1| flagellar basal-body rod protein flgc [Asticcacaulis excentricus CB 48] gi|315416447|gb|ADU13088.1| flagellar basal-body rod protein FlgC [Asticcacaulis excentricus CB 48] Length = 140 Score = 43.7 bits (101), Expect = 0.023, Method: Composition-based stats. Identities = 10/46 (21%), Positives = 21/46 (45%), Gaps = 7/46 (15%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSE 43 ++ +A A + R+ +A+N++N D+ G +R F Sbjct: 13 LSVAASALRAQQARMRIIAENIANADSTGQTPGADPYRGQIPVFEA 58 Score = 39.1 bits (89), Expect = 0.58, Method: Composition-based stats. Identities = 6/42 (14%), Positives = 18/42 (42%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G+++ SN S+ + M + + + +I+ + + Sbjct: 94 GYVKRSNVKSLIQSMDMRDAQRAYEANLNVIETTRSMEQKTL 135 >gi|89075502|ref|ZP_01161913.1| hypothetical flagellar hook-associated protein FlgM [Photobacterium sp. SKA34] gi|89048774|gb|EAR54345.1| hypothetical flagellar hook-associated protein FlgM [Photobacterium sp. SKA34] Length = 778 Score = 43.7 bits (101), Expect = 0.023, Method: Composition-based stats. Identities = 8/47 (17%), Positives = 17/47 (36%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51 +G++ +++L + N+SN T G+ V Sbjct: 6 MQLGISGLRTSQKQLDVTSHNISNVHTAGYSRQVVDQKAADAQWSGG 52 >gi|315301954|ref|ZP_07872952.1| flagellar hook-associated protein FlgK [Listeria ivanovii FSL F6-596] gi|313629677|gb|EFR97812.1| flagellar hook-associated protein FlgK [Listeria ivanovii FSL F6-596] Length = 444 Score = 43.7 bits (101), Expect = 0.023, Method: Composition-based stats. Identities = 16/126 (12%), Positives = 34/126 (26%), Gaps = 3/126 (2%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 FN L+ A + N+SN +T G+ V + K + Sbjct: 6 FNTSLSGMSAAQIANMVAQQNISNMNTPGYIRQAVDQQAIYSDGGLLGGNKQTGYGVKVT 65 Query: 65 YLSKEVGSFISTGTELDFALEGDAWFAL---ESPRGIILTRDGRFKVTDDGSLVSASGKY 121 + + ++T A + + + + T + + +A G Sbjct: 66 DIKRLTNVALTTQYNNQIAKQSASLYESGALNQALNLFGTPGKNTPSDNLDNFFTAWGAL 125 Query: 122 PVLDMA 127 Sbjct: 126 AKNPDQ 131 >gi|238751767|ref|ZP_04613255.1| hypothetical protein yrohd0001_35400 [Yersinia rohdei ATCC 43380] gi|238710038|gb|EEQ02268.1| hypothetical protein yrohd0001_35400 [Yersinia rohdei ATCC 43380] Length = 549 Score = 43.7 bits (101), Expect = 0.023, Method: Composition-based stats. Identities = 11/39 (28%), Positives = 20/39 (51%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 N ++ A + LSTV++N+SN G+ F++ Sbjct: 1 MNTAMSGLSAAQYGLSTVSNNISNYQVAGYNRQNAIFTQ 39 >gi|188995967|ref|YP_001930218.1| flagellar hook-associated protein FlgK [Sulfurihydrogenibium sp. YO3AOP1] gi|188931034|gb|ACD65664.1| flagellar hook-associated protein FlgK [Sulfurihydrogenibium sp. YO3AOP1] Length = 475 Score = 43.7 bits (101), Expect = 0.023, Method: Composition-based stats. Identities = 5/36 (13%), Positives = 14/36 (38%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 N E+ + L + + + +I ++ M + Sbjct: 437 VNMDEELINLTKLQRSYQAAARIITVTDELMQTILN 472 >gi|197262560|ref|ZP_03162634.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|204930865|ref|ZP_03221738.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|197240815|gb|EDY23435.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|204320324|gb|EDZ05528.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 553 Score = 43.7 bits (101), Expect = 0.023, Method: Composition-based stats. Identities = 9/52 (17%), Positives = 23/52 (44%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+TV++N++N + G+ ++ + Sbjct: 1 MSSLINHAMSGLNAAQAALNTVSNNINNYNVAGYTRQTTILAQANSTLGAGG 52 >gi|241203104|ref|YP_002974200.1| flagellar basal body rod protein FlgC [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240856994|gb|ACS54661.1| flagellar basal-body rod protein FlgC [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 138 Score = 43.7 bits (101), Expect = 0.023, Method: Composition-based stats. Identities = 17/99 (17%), Positives = 35/99 (35%), Gaps = 12/99 (12%) Query: 145 KGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNA 204 G+ + + T+G+ V + +G E +P P G ++ N Sbjct: 51 FGQQMDRTNGVETVGVKKVGVDEGDFSTEFDPSNPAADPK------------GVVKLPNV 98 Query: 205 NSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 N + EM M + +++ I + + I + S Sbjct: 99 NILVEMADMREANRSYDANLQTIKQTRDLISSTIDLLKS 137 Score = 42.5 bits (98), Expect = 0.051, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 22/54 (40%), Gaps = 7/54 (12%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNT----DTVG---FRTIKVKFSEVVGAIKN 50 + I + A RL V++N++N DT G +R + F + + Sbjct: 7 AMKIAGSGLEAQSTRLRIVSENIANARSTGDTPGADPYRRKTITFGQQMDRTNG 60 >gi|152975156|ref|YP_001374673.1| flagellar basal body rod protein FlgC [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152023908|gb|ABS21678.1| flagellar basal-body rod protein FlgC [Bacillus cytotoxicus NVH 391-98] Length = 137 Score = 43.7 bits (101), Expect = 0.023, Method: Composition-based stats. Identities = 16/128 (12%), Positives = 45/128 (35%), Gaps = 3/128 (2%) Query: 109 TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQG 168 GS ++A+ K+ + ++ + + + L Sbjct: 6 NASGSGLTAARKWMEVSSDNIVNANTTSAPDGEPYRRRSVVLESNRNFASMLKEAPNDGV 65 Query: 169 FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228 + R S + N+ P + G++ N + EM ++ + + + T++++ Sbjct: 66 KITRIESDPNENLVYNPSHPHANAE---GYVRYPNIDMTAEMTNVMVAQKMYEANTSVLN 122 Query: 229 ENEKSMLE 236 N+K + + Sbjct: 123 ANKKMLDK 130 Score = 41.0 bits (94), Expect = 0.16, Method: Composition-based stats. Identities = 14/88 (15%), Positives = 28/88 (31%), Gaps = 12/88 (13%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKV------KFSEVVGAI 48 M + N + A + + +DN+ N +T +R V F+ ++ Sbjct: 1 MFQAINASGSGLTAARKWMEVSSDNIVNANTTSAPDGEPYRRRSVVLESNRNFASMLKEA 60 Query: 49 KNDIDQKISFVASGKEYLSKEVGSFIST 76 ND + + E L + Sbjct: 61 PNDGVKITRIESDPNENLVYNPSHPHAN 88 >gi|219670203|ref|YP_002460638.1| flagellar hook-associated protein FlgK [Desulfitobacterium hafniense DCB-2] gi|219540463|gb|ACL22202.1| flagellar hook-associated protein FlgK [Desulfitobacterium hafniense DCB-2] Length = 583 Score = 43.7 bits (101), Expect = 0.023, Method: Composition-based stats. Identities = 8/53 (15%), Positives = 18/53 (33%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK 55 + + A + + L T N++N +T+G+ V + Sbjct: 6 SGLELARRALESQQIALDTTGHNIANANTIGYTRQVVNLQATSPDSIPGMGHY 58 Score = 42.5 bits (98), Expect = 0.052, Method: Composition-based stats. Identities = 3/39 (7%), Positives = 14/39 (35%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 N E+ +I + + + ++ + + + + Sbjct: 542 VNMDEEITNLIKFQKSYTAAARIVTMLDSMLDTIVNGMG 580 >gi|89067518|ref|ZP_01155031.1| flagellar hook-associated protein [Oceanicola granulosus HTCC2516] gi|89047087|gb|EAR53141.1| flagellar hook-associated protein [Oceanicola granulosus HTCC2516] Length = 478 Score = 43.7 bits (101), Expect = 0.024, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 22/50 (44%), Gaps = 1/50 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGF-RTIKVKFSEVVGAIKNDI 52 S L+ +R V+ N++N T G+ R S ++G ++ D Sbjct: 6 SIGSALSGLEVASRRAEIVSGNIANALTEGYGRRSLAVSSTMLGGVRADG 55 >gi|322432968|ref|YP_004210217.1| flagellar hook-associated protein FlgK [Acidobacterium sp. MP5ACTX9] gi|321165195|gb|ADW70899.1| flagellar hook-associated protein FlgK [Acidobacterium sp. MP5ACTX9] Length = 457 Score = 43.7 bits (101), Expect = 0.024, Method: Composition-based stats. Identities = 11/52 (21%), Positives = 21/52 (40%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 ++ N A +A E +S +N++N T G+ V E + + Sbjct: 5 MSTLNTASEALMAQEAEISVTNNNIANASTAGYTRETVSLQEAAPTSQGALS 56 Score = 36.0 bits (81), Expect = 4.9, Method: Composition-based stats. Identities = 6/40 (15%), Positives = 12/40 (30%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 S + E +I Q + + ++ I I Sbjct: 415 SGVSIDEESANLIRYQQAYEAAAKVVSTISTLFDTTINMI 454 >gi|162661125|gb|EDQ48677.1| predicted protein [Physcomitrella patens subsp. patens] Length = 515 Score = 43.7 bits (101), Expect = 0.024, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 23/65 (35%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QRL+ +A N++N DT G++ + F E + + S + Sbjct: 396 ALKIRTQRLAIIASNIANADTPGYQAKDLDFKEALERSNATMLSVSSTSKGHIPSSEMKS 455 Query: 71 GSFIS 75 Sbjct: 456 IYDTQ 460 >gi|325289235|ref|YP_004265416.1| flagellar hook-associated protein FlgK [Syntrophobotulus glycolicus DSM 8271] gi|324964636|gb|ADY55415.1| flagellar hook-associated protein FlgK [Syntrophobotulus glycolicus DSM 8271] Length = 512 Score = 43.7 bits (101), Expect = 0.024, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 33/89 (37%), Gaps = 3/89 (3%) Query: 1 MQT--SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 M + +GL A + L+T+ N+SN T G+ + +V + A+ + Sbjct: 1 MNSFFGLTVGLKGLTASQAALNTINHNISNAGTTGY-SRQVVAQKASRALAAANGAGMVG 59 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGD 87 + + F+ + A G+ Sbjct: 60 TGVDITTIVQIRNVFLDRRYWQENAQYGE 88 Score = 36.8 bits (83), Expect = 2.8, Method: Composition-based stats. Identities = 4/38 (10%), Positives = 15/38 (39%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 + E +I +N+ ++ ++ + I ++ Sbjct: 472 VSLDEETSNLIKYQLAYNAAAKVMSVMDEVLDVTINSL 509 >gi|229172391|ref|ZP_04299950.1| Flagellar basal-body rod protein FlgC [Bacillus cereus MM3] gi|228610862|gb|EEK68125.1| Flagellar basal-body rod protein FlgC [Bacillus cereus MM3] Length = 137 Score = 43.7 bits (101), Expect = 0.024, Method: Composition-based stats. Identities = 7/40 (17%), Positives = 22/40 (55%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 G++ N + EM ++ + + + T++++ N+K + + Sbjct: 91 GYVRYPNIDVTAEMTNVMVAQKMYEANTSVLNANKKMLDK 130 Score = 42.2 bits (97), Expect = 0.069, Method: Composition-based stats. Identities = 5/33 (15%), Positives = 13/33 (39%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG 33 M + N + + + ++N+ N +T Sbjct: 1 MFQAINASGSGLTTARKWMEVTSNNIVNANTTA 33 >gi|167639076|ref|ZP_02397349.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str. A0193] gi|177650375|ref|ZP_02933342.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str. A0174] gi|254734585|ref|ZP_05192297.1| flagellar basal body rod protein FlgC [Bacillus anthracis str. Western North America USA6153] gi|167512866|gb|EDR88239.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str. A0193] gi|172083519|gb|EDT68579.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str. A0174] Length = 137 Score = 43.7 bits (101), Expect = 0.024, Method: Composition-based stats. Identities = 7/40 (17%), Positives = 22/40 (55%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 G++ N + EM ++ + + + T++++ N+K + + Sbjct: 91 GYVRYPNIDVTAEMTNVMVAQKMYEANTSVLNANKKMLDK 130 Score = 42.2 bits (97), Expect = 0.068, Method: Composition-based stats. Identities = 5/33 (15%), Positives = 13/33 (39%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG 33 M + N + + + ++N+ N +T Sbjct: 1 MFQAINASGSGLTTARKWMEVTSNNIVNANTTA 33 >gi|104782846|ref|YP_609344.1| flagellar basal body rod protein FlgB [Pseudomonas entomophila L48] gi|95111833|emb|CAK16557.1| flagellar biosynthesis; cell-proximal portion of basal-body rod [Pseudomonas entomophila L48] Length = 135 Score = 43.7 bits (101), Expect = 0.024, Method: Composition-based stats. Identities = 12/61 (19%), Positives = 26/61 (42%) Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76 QR +A+N++N DT ++ + FS V+ A + + + + G ++ Sbjct: 21 QRAEVLANNIANADTPNYKARDMDFSSVLAAEADKQQKGRIALDRTNSRHIEAEGLAMAD 80 Query: 77 G 77 Sbjct: 81 D 81 >gi|209967001|ref|YP_002299916.1| flagellar hook-associated protein FlgK, putative [Rhodospirillum centenum SW] gi|209960467|gb|ACJ01104.1| flagellar hook-associated protein FlgK, putative [Rhodospirillum centenum SW] Length = 526 Score = 43.7 bits (101), Expect = 0.024, Method: Composition-based stats. Identities = 10/61 (16%), Positives = 22/61 (36%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + + ++ A + ++TV+ N SN T G+ V V + + Sbjct: 6 AISSAISGLRATQNNIATVSQNTSNIQTPGYTRKFVTQEAQVHTPTTGGVRTGQVQRTFD 65 Query: 64 E 64 + Sbjct: 66 Q 66 Score = 36.4 bits (82), Expect = 4.0, Method: Composition-based stats. Identities = 5/34 (14%), Positives = 13/34 (38%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 N E+ + L + + + + +I E+ Sbjct: 488 VNLDEEVVMLTVLQRSYAASSRVITTVEQMYDSL 521 >gi|30261743|ref|NP_844120.1| flagellar basal body rod protein FlgC [Bacillus anthracis str. Ames] gi|47526963|ref|YP_018312.1| flagellar basal body rod protein FlgC [Bacillus anthracis str. 'Ames Ancestor'] gi|49184573|ref|YP_027825.1| flagellar basal body rod protein FlgC [Bacillus anthracis str. Sterne] gi|49480942|ref|YP_035864.1| flagellar basal body rod protein FlgC [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52143711|ref|YP_083115.1| flagellar basal body rod protein FlgC [Bacillus cereus E33L] gi|65319012|ref|ZP_00391971.1| COG1558: Flagellar basal body rod protein [Bacillus anthracis str. A2012] gi|165869530|ref|ZP_02214189.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str. A0488] gi|167633252|ref|ZP_02391577.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str. A0442] gi|170686301|ref|ZP_02877523.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str. A0465] gi|170706453|ref|ZP_02896913.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str. A0389] gi|190566322|ref|ZP_03019240.1| flagellar basal-body rod protein FlgC [Bacillus anthracis Tsiankovskii-I] gi|196038959|ref|ZP_03106266.1| flagellar basal-body rod protein FlgC [Bacillus cereus NVH0597-99] gi|218902859|ref|YP_002450693.1| flagellar basal-body rod protein FlgC [Bacillus cereus AH820] gi|227815498|ref|YP_002815507.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str. CDC 684] gi|228914323|ref|ZP_04077938.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228926780|ref|ZP_04089848.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228933028|ref|ZP_04095891.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228945347|ref|ZP_04107702.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229090705|ref|ZP_04221938.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock3-42] gi|229121296|ref|ZP_04250527.1| Flagellar basal-body rod protein FlgC [Bacillus cereus 95/8201] gi|229155315|ref|ZP_04283426.1| Flagellar basal-body rod protein FlgC [Bacillus cereus ATCC 4342] gi|229602307|ref|YP_002866143.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str. A0248] gi|254683233|ref|ZP_05147094.1| flagellar basal body rod protein FlgC [Bacillus anthracis str. CNEVA-9066] gi|254723821|ref|ZP_05185607.1| flagellar basal body rod protein FlgC [Bacillus anthracis str. A1055] gi|254740994|ref|ZP_05198682.1| flagellar basal body rod protein FlgC [Bacillus anthracis str. Kruger B] gi|254755237|ref|ZP_05207271.1| flagellar basal body rod protein FlgC [Bacillus anthracis str. Vollum] gi|254759773|ref|ZP_05211797.1| flagellar basal body rod protein FlgC [Bacillus anthracis str. Australia 94] gi|300117337|ref|ZP_07055127.1| flagellar basal body rod protein FlgC [Bacillus cereus SJ1] gi|301053281|ref|YP_003791492.1| flagellar basal body rod protein [Bacillus anthracis CI] gi|30255971|gb|AAP25606.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str. Ames] gi|47502111|gb|AAT30787.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str. 'Ames Ancestor'] gi|49178500|gb|AAT53876.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str. Sterne] gi|49332498|gb|AAT63144.1| flagellar basal-body rod protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51977180|gb|AAU18730.1| flagellar basal-body rod protein [Bacillus cereus E33L] gi|164714970|gb|EDR20488.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str. A0488] gi|167531290|gb|EDR93968.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str. A0442] gi|170128551|gb|EDS97418.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str. A0389] gi|170669998|gb|EDT20739.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str. A0465] gi|190562457|gb|EDV16424.1| flagellar basal-body rod protein FlgC [Bacillus anthracis Tsiankovskii-I] gi|196030104|gb|EDX68704.1| flagellar basal-body rod protein FlgC [Bacillus cereus NVH0597-99] gi|218535692|gb|ACK88090.1| flagellar basal-body rod protein FlgC [Bacillus cereus AH820] gi|227007024|gb|ACP16767.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str. CDC 684] gi|228628240|gb|EEK84956.1| Flagellar basal-body rod protein FlgC [Bacillus cereus ATCC 4342] gi|228662141|gb|EEL17750.1| Flagellar basal-body rod protein FlgC [Bacillus cereus 95/8201] gi|228692647|gb|EEL46373.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock3-42] gi|228814319|gb|EEM60585.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228826629|gb|EEM72400.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228832893|gb|EEM78462.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228845317|gb|EEM90353.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229266715|gb|ACQ48352.1| flagellar basal-body rod protein FlgC [Bacillus anthracis str. A0248] gi|298725172|gb|EFI65824.1| flagellar basal body rod protein FlgC [Bacillus cereus SJ1] gi|300375450|gb|ADK04354.1| flagellar basal body rod protein [Bacillus cereus biovar anthracis str. CI] Length = 137 Score = 43.7 bits (101), Expect = 0.024, Method: Composition-based stats. Identities = 7/40 (17%), Positives = 22/40 (55%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 G++ N + EM ++ + + + T++++ N+K + + Sbjct: 91 GYVRYPNIDVTAEMTNVMVAQKMYEANTSVLNANKKMLDK 130 Score = 42.2 bits (97), Expect = 0.071, Method: Composition-based stats. Identities = 5/33 (15%), Positives = 13/33 (39%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG 33 M + N + + + ++N+ N +T Sbjct: 1 MFQAINASGSGLTTARKWMEVTSNNIVNANTTA 33 >gi|313639049|gb|EFS04037.1| flagellar hook-associated protein FlgK [Listeria seeligeri FSL S4-171] Length = 507 Score = 43.7 bits (101), Expect = 0.024, Method: Composition-based stats. Identities = 16/126 (12%), Positives = 34/126 (26%), Gaps = 3/126 (2%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 FN L+ A + N+SN +T G+ V + K + Sbjct: 6 FNTSLSGMSAAQIANMVAQQNISNMNTPGYIRQAVDQQALYSDGGLLGGNKQTGYGVKVT 65 Query: 65 YLSKEVGSFISTGTELDFALEGDAWFAL---ESPRGIILTRDGRFKVTDDGSLVSASGKY 121 + + ++T A + + + + T + + +A G Sbjct: 66 DIKRLTNVALTTQYNNQIAKQSASLYESGALNQALNLFGTPGKNTPSDNLDNFFTAWGAL 125 Query: 122 PVLDMA 127 Sbjct: 126 AKNPDQ 131 Score = 37.5 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 5/35 (14%), Positives = 12/35 (34%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 N EM ++ + + T ++ M + Sbjct: 470 VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALL 504 >gi|255305269|ref|ZP_05349441.1| flagellar basal-body rod protein [Clostridium difficile ATCC 43255] Length = 105 Score = 43.7 bits (101), Expect = 0.024, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 33/93 (35%), Gaps = 2/93 (2%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A A R T+A+N++N +T G++ V F E + I++KI + + Sbjct: 10 ALDATNLRSQTIANNIANINTEGYKRHYVTFEETLNDAMPKIEEKIDNSKGLRVDGNNVD 69 Query: 71 GSFISTGTELDFALEGDAWFALESPRGIILTRD 103 A + I +T+ Sbjct: 70 IEEEKVNQA--MATLQYNALISFANGKIAMTKS 100 >gi|134095091|ref|YP_001100166.1| flagellar hook-associated protein FlgK [Herminiimonas arsenicoxydans] gi|133738994|emb|CAL62042.1| putative flagellar hook-associated protein 1 FlgK-like [Herminiimonas arsenicoxydans] Length = 659 Score = 43.7 bits (101), Expect = 0.024, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 19/47 (40%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA 47 M +I + A ++T N++N T G+ V + + G Sbjct: 1 MSNLLSIAKSGLAAAHAGIATTGHNIANQATPGYSRQLVIQASLGGQ 47 Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats. Identities = 21/146 (14%), Positives = 43/146 (29%), Gaps = 1/146 (0%) Query: 94 SPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK 153 P + V+ G+ + SG D S+ + N+ GE+ K Sbjct: 512 PPAETTVPYTAGAIVSFGGAEIKISGTPADGDTFSISANTNGDGDNRNMLLLGELQTKNV 571 Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQM 213 + Y+ SQ V + + + E ++ +S N E + Sbjct: 572 LQGGTASYNSAYSQ-LVSQVGNKTRELETNSLAEGALLKQMQTAQQSESGVNLDEEATNL 630 Query: 214 IHLTQKFNSITTLIDENEKSMLEAIR 239 + Q + + ++ I Sbjct: 631 LRYQQAYQASGKVMQAVSDMFDVLIS 656 >gi|291617026|ref|YP_003519768.1| FlgK [Pantoea ananatis LMG 20103] gi|291152056|gb|ADD76640.1| FlgK [Pantoea ananatis LMG 20103] Length = 546 Score = 43.7 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 15/167 (8%), Positives = 46/167 (27%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + N ++ A + LST ++N+SN G+ +E ++ Sbjct: 1 MSSIINSAMSGLSAAQAALSTTSNNISNYTVAGYSRQTTILAEANSTLQGKSYYGNGVNV 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 +G + + G+ + + + + ++ T G + Sbjct: 61 TGVQREYDSFIAAQLRGSSATYNAANTQYSQVSNIDDLMSTSTTNLSTAIQGFFSNMQNV 120 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQ 167 + + + + + + + ++ Sbjct: 121 VSNANDPAARQSMLSNSQGLVNQFQTQAQYLTNMQNSVNTNIASNVD 167 >gi|322421655|ref|YP_004200878.1| flagellar hook-associated protein FlgK [Geobacter sp. M18] gi|320128042|gb|ADW15602.1| flagellar hook-associated protein FlgK [Geobacter sp. M18] Length = 481 Score = 43.7 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 24/187 (12%), Positives = 54/187 (28%), Gaps = 8/187 (4%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND--IDQKISFVASG 62 F+I + A + +N+SN +T G+ +V + N + + A Sbjct: 7 FDIASSGITANRLAIEVTGENISNVNTEGYSRQRVVMENKPVSTANGFALGTGVEIAAVQ 66 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSL------VS 116 + Y + ++ + +L + P LT DG + V+ Sbjct: 67 RSYDNMLQLQLVNANSTYQESLAQQSALEQIEPSFNSLTSDGLGTAVANFFGAFQDLSVN 126 Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 SG + + + + S + + D ++ Sbjct: 127 PSGSAERQAVLTRAQIMVDSFHQLDSSLTSVASTADNNLVGITAEVTDNARNLALVNTQI 186 Query: 177 ISPNIPP 183 ++ N Sbjct: 187 LATNSVG 193 Score = 36.0 bits (81), Expect = 4.3, Method: Composition-based stats. Identities = 5/41 (12%), Positives = 13/41 (31%), Gaps = 2/41 (4%) Query: 197 GFLEDSN--ANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 L SN + E+ + + F +++ + Sbjct: 434 NALRASNSEVSLDEELLNLTRYQRAFQGSAKVVNAATDMLD 474 >gi|259908806|ref|YP_002649162.1| flagellar hook-associated protein FlgK [Erwinia pyrifoliae Ep1/96] gi|224964428|emb|CAX55937.1| Flagellar hook-filament junction protein 1 [Erwinia pyrifoliae Ep1/96] Length = 551 Score = 43.7 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 8/51 (15%), Positives = 19/51 (37%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51 M N ++ A L+T ++N++N G+ ++ + Sbjct: 1 MSNLINTAMSGLSASSAALNTTSNNITNYAVTGYSRQTTVLNQSASTLSGG 51 >gi|27381968|ref|NP_773497.1| flagellar hook-associated protein FlgK [Bradyrhizobium japonicum USDA 110] gi|27355138|dbj|BAC52122.1| flgK [Bradyrhizobium japonicum USDA 110] Length = 491 Score = 43.7 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 6/41 (14%), Positives = 19/41 (46%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N EM M+ + + +++ + +I ++ + + + Sbjct: 450 SGVNMDDEMSLMLQVERTYSASSKIISTVDQMLQSLLAAVG 490 >gi|330975982|gb|EGH76048.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 686 Score = 43.7 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 11/38 (28%), Positives = 21/38 (55%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39 + +IGL+ A ++T+ +N +N DT G+ +V Sbjct: 1 MSLISIGLSGINASSAAINTIGNNTANVDTAGYSRQQV 38 >gi|320325090|gb|EFW81159.1| flagellar basal body rod protein FlgB [Pseudomonas syringae pv. glycinea str. B076] Length = 135 Score = 43.7 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 30/80 (37%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + I A QR +A+N+SN DT F+ + FS V+ A + + + Sbjct: 6 DKALGIHEKALNFRAQRAEVLANNISNADTPNFKARDLDFSSVLAAENDKVQNGYFALNK 65 Query: 62 GKEYLSKEVGSFISTGTELD 81 + G GT + Sbjct: 66 TNSRHIEAEGMGNDDGTLMY 85 >gi|304397210|ref|ZP_07379089.1| flagellar hook-associated protein FlgK [Pantoea sp. aB] gi|304355359|gb|EFM19727.1| flagellar hook-associated protein FlgK [Pantoea sp. aB] Length = 549 Score = 43.7 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 15/159 (9%), Positives = 48/159 (30%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + N ++ A + LST ++N+SN G+ ++ ++ + Sbjct: 1 MSSIINSAMSGLSAAQAALSTTSNNISNYTVAGYSRQTTVLAQANSTLQGNSYYGNGVNI 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 +G + + G+ +++ + + ++ T + G + Sbjct: 61 TGVQREYDAFIATQLRGSSANYSAVSTQHSQISNIDDLLSTSTTSLSTSLQGFFTNLQNV 120 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG 159 + S + + + + ++ Sbjct: 121 VSNANDPSARQSMLSNAQGLVSQFQTSAQYLNNMQNSVN 159 >gi|229826299|ref|ZP_04452368.1| hypothetical protein GCWU000182_01671 [Abiotrophia defectiva ATCC 49176] gi|229789169|gb|EEP25283.1| hypothetical protein GCWU000182_01671 [Abiotrophia defectiva ATCC 49176] Length = 131 Score = 43.7 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 22/50 (44%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 A A R + +++N++N DT G++ V+F + VA Sbjct: 16 AADASWLRNNLISNNIANNDTPGYKRKDVQFESYLAMELIRGGSLRHRVA 65 >gi|126697816|ref|YP_001086713.1| flagellar basal-body rod protein [Clostridium difficile 630] gi|115249253|emb|CAJ67066.1| Flagellar basal-body rod protein FlgB [Clostridium difficile] Length = 105 Score = 43.7 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 10/35 (28%), Positives = 19/35 (54%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV 45 A R T+A+N++N +T G++ + F E + Sbjct: 10 GLDATNLRSQTIANNIANINTEGYKRHYITFEETL 44 >gi|84502400|ref|ZP_01000536.1| flagellar basal-body rod protein flgB [Oceanicola batsensis HTCC2597] gi|84389212|gb|EAQ02009.1| flagellar basal-body rod protein flgB [Oceanicola batsensis HTCC2597] Length = 133 Score = 43.7 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 1/43 (2%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKV-KFSEVVGAIKNDI 52 L R +A N++N+DT G++ V F+EV+ Sbjct: 15 RMNWLGARQQVIAQNVANSDTPGYKARDVSNFAEVLRGAGGAG 57 >gi|114562339|ref|YP_749852.1| flagellar basal body rod protein FlgB [Shewanella frigidimarina NCIMB 400] gi|114333632|gb|ABI71014.1| flagellar basal-body rod protein FlgB [Shewanella frigidimarina NCIMB 400] Length = 132 Score = 43.7 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 14/105 (13%), Positives = 30/105 (28%) Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76 QR ++ N++N +T ++ V F+ + A + + K + + Sbjct: 21 QRAEVISSNIANANTPHYKAQDVNFASAMQAASSHQKGLSMSQTTEKHFDLTALSQQHVQ 80 Query: 77 GTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 + A GD ++ G L Sbjct: 81 YRMPNQADTGDGNTVDTQKEQAAFMQNALEYQMSLGFLEGKFNGM 125 >gi|289433983|ref|YP_003463855.1| flagellar hook-associated protein 1-related protein [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170227|emb|CBH26767.1| flagellar hook-associated protein 1-related protein [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 507 Score = 43.7 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 16/126 (12%), Positives = 34/126 (26%), Gaps = 3/126 (2%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 FN L+ A + N+SN +T G+ V + K + Sbjct: 6 FNTSLSGMSAAQIANMVAQQNISNMNTPGYIRQAVDQQALYSDGGLLGGNKQTGYGVKVT 65 Query: 65 YLSKEVGSFISTGTELDFALEGDAWFAL---ESPRGIILTRDGRFKVTDDGSLVSASGKY 121 + + ++T A + + + + T + + +A G Sbjct: 66 DIKRLTNVALTTQYNNQIAKQSASLYESGALNQALNLFGTPGKNTPSDNLDNFFTAWGAL 125 Query: 122 PVLDMA 127 Sbjct: 126 AKNPDQ 131 Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats. Identities = 5/35 (14%), Positives = 12/35 (34%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 N EM ++ + + T ++ M + Sbjct: 470 VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALL 504 >gi|224436692|ref|ZP_03657696.1| flagellar hook-associated protein FlgK [Helicobacter cinaedi CCUG 18818] gi|313143190|ref|ZP_07805383.1| flagellar hook-protein FlgK [Helicobacter cinaedi CCUG 18818] gi|313128221|gb|EFR45838.1| flagellar hook-protein FlgK [Helicobacter cinaedi CCUG 18818] Length = 606 Score = 43.7 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 14/37 (37%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S + EM +I + + +I ++ + + Sbjct: 566 SQVSLDEEMVNLIKFQGGYAANAKVITTIDRMIETLL 602 Score = 39.1 bits (89), Expect = 0.51, Method: Composition-based stats. Identities = 6/29 (20%), Positives = 11/29 (37%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTD 30 +S N A + + +N+SN Sbjct: 5 LSSLNTSYTGLQAHQLMVDVTGNNISNAS 33 >gi|118477180|ref|YP_894331.1| flagellar basal body rod protein FlgC [Bacillus thuringiensis str. Al Hakam] gi|118416405|gb|ABK84824.1| flagellar basal-body rod protein [Bacillus thuringiensis str. Al Hakam] Length = 137 Score = 43.7 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 7/40 (17%), Positives = 22/40 (55%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 G++ N + EM ++ + + + T++++ N+K + + Sbjct: 91 GYVRYPNIDVTAEMTNVMVAQKMYEANTSVLNANKKMLDK 130 Score = 42.2 bits (97), Expect = 0.072, Method: Composition-based stats. Identities = 5/33 (15%), Positives = 13/33 (39%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG 33 M + N + + + ++N+ N +T Sbjct: 1 MFQAINASGSGLTTARKWMEVTSNNIVNANTTA 33 >gi|296157459|ref|ZP_06840294.1| flagellar basal-body rod protein FlgB [Burkholderia sp. Ch1-1] gi|295892231|gb|EFG72014.1| flagellar basal-body rod protein FlgB [Burkholderia sp. Ch1-1] Length = 164 Score = 43.7 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 27/70 (38%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A R ++ N++N DT G++ V F+ + AS L+ Sbjct: 15 ALDVRAYRQELLSSNIANADTPGYKARDVDFASSLAGALKKAGGSAGTAASNNSTLAMTQ 74 Query: 71 GSFISTGTEL 80 + +++G + Sbjct: 75 PAGVTSGMSM 84 >gi|238752868|ref|ZP_04614333.1| Flagellar basal-body rod protein FlgC [Yersinia rohdei ATCC 43380] gi|238708907|gb|EEQ01160.1| Flagellar basal-body rod protein FlgC [Yersinia rohdei ATCC 43380] Length = 141 Score = 43.7 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 7/44 (15%), Positives = 20/44 (45%) Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +G++ N + EM M+ ++ F + +++ + +R Sbjct: 94 QGYVFYPQVNVVSEMADMMSASRSFETNVEVLNSVKSMQQSVLR 137 Score = 38.3 bits (87), Expect = 0.99, Method: Composition-based stats. Identities = 16/96 (16%), Positives = 29/96 (30%), Gaps = 6/96 (6%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQK 55 + I +A A RL+T+A N++N ++ ++ FS V Sbjct: 4 NNIYRISGSAMTAQTIRLNTIASNLANAESPAASEATVYKARSPVFSAVYSPRSAAAPGG 63 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFA 91 + + + GS A F Sbjct: 64 VGGAQVQVLDVVETGGSVQRYEPNHPLANPQGYVFY 99 >gi|163850061|ref|YP_001638104.1| flagellar basal body rod protein FlgC [Methylobacterium extorquens PA1] gi|218528664|ref|YP_002419480.1| flagellar basal body rod protein FlgC [Methylobacterium chloromethanicum CM4] gi|240137195|ref|YP_002961664.1| flagellar biosynthesis; cell-proximal portion of basal-body rod [Methylobacterium extorquens AM1] gi|254559207|ref|YP_003066302.1| cell-proximal portion of basal-body rod biosynthesis protein [Methylobacterium extorquens DM4] gi|163661666|gb|ABY29033.1| flagellar basal-body rod protein FlgC [Methylobacterium extorquens PA1] gi|218520967|gb|ACK81552.1| flagellar basal-body rod protein FlgC [Methylobacterium chloromethanicum CM4] gi|240007161|gb|ACS38387.1| flagellar biosynthesis; cell-proximal portion of basal-body rod [Methylobacterium extorquens AM1] gi|254266485|emb|CAX22249.1| flagellar biosynthesis; cell-proximal portion of basal-body rod [Methylobacterium extorquens DM4] Length = 138 Score = 43.7 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 16/42 (38%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 N N + EM M + + + +I + + I + S Sbjct: 97 PNVNMLVEMADMREANRSYEANLQVIKQARAMVASVIDLLKS 138 Score = 37.2 bits (84), Expect = 2.1, Method: Composition-based stats. Identities = 10/72 (13%), Positives = 22/72 (30%), Gaps = 7/72 (9%) Query: 8 GLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQKISFVA 60 A A R+ V++N++N + G + V F + ++ + Sbjct: 12 ASAGLEAQSLRMRVVSENLANAQSTGATPGADPYARKTVTFRAELDRAAGVASVRLREIG 71 Query: 61 SGKEYLSKEVGS 72 + E Sbjct: 72 TDNAPFRTEHDP 83 >gi|146305256|ref|YP_001185721.1| flagellar hook-associated protein FlgK [Pseudomonas mendocina ymp] gi|145573457|gb|ABP82989.1| flagellar hook-associated protein FlgK [Pseudomonas mendocina ymp] Length = 455 Score = 43.3 bits (100), Expect = 0.026, Method: Composition-based stats. Identities = 9/66 (13%), Positives = 24/66 (36%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66 I + A + L++ N++N +T GF ++ + G + + ++ + Sbjct: 7 IAYSGVRASQVALASTGQNIANVNTPGFSRLQTITGSLAGQGGLSVGGGVEVISIRRMTN 66 Query: 67 SKEVGS 72 Sbjct: 67 DFHNQQ 72 Score = 41.4 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 4/37 (10%), Positives = 13/37 (35%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S + E ++ Q + + +I + + + Sbjct: 416 SAVSLDEEAVNLMTYQQAYQANMKVISTANQLFDDML 452 >gi|330953732|gb|EGH53992.1| flagellar hook-associated protein FlgK [Pseudomonas syringae Cit 7] Length = 686 Score = 43.3 bits (100), Expect = 0.026, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 35/97 (36%), Gaps = 1/97 (1%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + +IGL+ A ++T+ +N +N DT G+ +V + I + Sbjct: 1 MSLISIGLSGINASSAAINTIGNNTANVDTAGYSRQQVL-TTASAQIALGQGVGYIGTGT 59 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98 + + S++ T + AL DA Sbjct: 60 TLSDVRRIYNSYLDTQLQSSTALSADAVAYSGQASKT 96 >gi|313650475|gb|EFS14882.1| flagellar basal-body rod protein flgC [Shigella flexneri 2a str. 2457T] gi|332092840|gb|EGI97908.1| flagellar basal-body rod protein flgC [Shigella dysenteriae 155-74] gi|332758233|gb|EGJ88556.1| flagellar basal-body rod protein flgC [Shigella flexneri 4343-70] gi|332759610|gb|EGJ89915.1| flagellar basal-body rod protein flgC [Shigella flexneri 2747-71] gi|332761419|gb|EGJ91703.1| flagellar basal-body rod protein flgC [Shigella flexneri K-671] gi|332767681|gb|EGJ97874.1| hypothetical protein SF293071_1335 [Shigella flexneri 2930-71] gi|333004883|gb|EGK24403.1| flagellar basal-body rod protein flgC [Shigella flexneri VA-6] gi|333005580|gb|EGK25098.1| flagellar basal-body rod protein flgC [Shigella flexneri K-218] gi|333008276|gb|EGK27750.1| flagellar basal-body rod protein flgC [Shigella flexneri K-272] gi|333019432|gb|EGK38715.1| flagellar basal-body rod protein flgC [Shigella flexneri K-304] gi|333019766|gb|EGK39038.1| flagellar basal-body rod protein flgC [Shigella flexneri K-227] Length = 42 Score = 43.3 bits (100), Expect = 0.026, Method: Composition-based stats. Identities = 5/39 (12%), Positives = 18/39 (46%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 N + + EM + ++ + + +++ + ML+ + Sbjct: 1 MPNVDVVGEMVNTMSASRSYQANVEVLNTVKSMMLKTLT 39 >gi|292487945|ref|YP_003530820.1| flagellar hook-filament junction protein 1 [Erwinia amylovora CFBP1430] gi|292899164|ref|YP_003538533.1| flagellar hook-associated protein 1 [Erwinia amylovora ATCC 49946] gi|291199012|emb|CBJ46123.1| flagellar hook-associated protein 1 [Erwinia amylovora ATCC 49946] gi|291553367|emb|CBA20412.1| Flagellar hook-filament junction protein 1 [Erwinia amylovora CFBP1430] gi|312172066|emb|CBX80323.1| Flagellar hook-filament junction protein 1 [Erwinia amylovora ATCC BAA-2158] Length = 551 Score = 43.3 bits (100), Expect = 0.026, Method: Composition-based stats. Identities = 8/51 (15%), Positives = 19/51 (37%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51 M N ++ A L+T ++N++N G+ ++ + Sbjct: 1 MSNLINTAMSGLSASSAALNTTSNNITNYAVTGYSRQTTVLNQSASTLSGG 51 >gi|196033444|ref|ZP_03100856.1| flagellar basal-body rod protein FlgC [Bacillus cereus W] gi|195993878|gb|EDX57834.1| flagellar basal-body rod protein FlgC [Bacillus cereus W] Length = 137 Score = 43.3 bits (100), Expect = 0.026, Method: Composition-based stats. Identities = 7/40 (17%), Positives = 22/40 (55%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 G++ N + EM ++ + + + T++++ N+K + + Sbjct: 91 GYVRYPNIDVTAEMTNVMVAQKMYEANTSVLNANKKMLDK 130 Score = 42.2 bits (97), Expect = 0.072, Method: Composition-based stats. Identities = 5/33 (15%), Positives = 13/33 (39%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG 33 M + N + + + ++N+ N +T Sbjct: 1 MFQAINASGSGLTTARKWMEVTSNNIVNANTTA 33 >gi|326402283|ref|YP_004282364.1| flagellar hook-associated protein [Acidiphilium multivorum AIU301] gi|325049144|dbj|BAJ79482.1| flagellar hook-associated protein [Acidiphilium multivorum AIU301] Length = 485 Score = 43.3 bits (100), Expect = 0.026, Method: Composition-based stats. Identities = 10/49 (20%), Positives = 21/49 (42%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 I + A++Q+L+ V+ N++N +T G+ S + Sbjct: 6 GLAIASSGLSAIDQQLAVVSQNIANANTSGYSVETANLSSATAGGQGSG 54 >gi|307731366|ref|YP_003908590.1| flagellar basal-body rod protein FlgB [Burkholderia sp. CCGE1003] gi|307585901|gb|ADN59299.1| flagellar basal-body rod protein FlgB [Burkholderia sp. CCGE1003] Length = 163 Score = 43.3 bits (100), Expect = 0.027, Method: Composition-based stats. Identities = 11/73 (15%), Positives = 23/73 (31%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A R ++ N++N DT G++ V F+ + ++ + Sbjct: 15 ALDVRAYRQELLSSNIANADTPGYKARDVDFASSLAGALKKTGAAGHTASNTATLAMAQP 74 Query: 71 GSFISTGTELDFA 83 S + A Sbjct: 75 AGVTSGMSMAATA 87 >gi|126653752|ref|ZP_01725670.1| flagellar basal-body rod protein B [Bacillus sp. B14905] gi|126589716|gb|EAZ83852.1| flagellar basal-body rod protein B [Bacillus sp. B14905] Length = 130 Score = 43.3 bits (100), Expect = 0.027, Method: Composition-based stats. Identities = 11/78 (14%), Positives = 29/78 (37%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69 T+A+N++N DT ++ V F +++ K+ ++ ++ Sbjct: 13 NGLSYATLNHKTIANNIANVDTPNYKAKNVSFKDMLAEQKDISISAYRTDNRHYDFTIRQ 72 Query: 70 VGSFISTGTELDFALEGD 87 ++ L + G+ Sbjct: 73 STPGVNNIENLRYRNNGN 90 >gi|89056689|ref|YP_512140.1| flagellar basal body rod protein FlgB [Jannaschia sp. CCS1] gi|88866238|gb|ABD57115.1| flagellar basal-body rod protein FlgB [Jannaschia sp. CCS1] Length = 117 Score = 43.3 bits (100), Expect = 0.027, Method: Composition-based stats. Identities = 16/111 (14%), Positives = 30/111 (27%), Gaps = 2/111 (1%) Query: 5 FNIGLAAQLALE-QRLSTVADNMSNTDTVGFR-TIKVKFSEVVGAIKNDIDQKISFVASG 62 + R + VA N++N DT G+R F + + + + + V Sbjct: 7 IFQLASGLARHSASRQAVVAQNIANADTPGYRARDVADFQQTWRNMTAEAREGRTEVPMR 66 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113 ++ + L G S + T G Sbjct: 67 VIDARTPASPNGNSVSLEFEMLRGIEAQRAHSRALRVYGSAMTILRTSIGR 117 >gi|34556699|ref|NP_906514.1| flagellar hook-associated protein FlgK [Wolinella succinogenes DSM 1740] gi|34482413|emb|CAE09414.1| FLAGELLAR HOOK-ASSOCIATED PROTEIN 1 [Wolinella succinogenes] Length = 609 Score = 43.3 bits (100), Expect = 0.027, Method: Composition-based stats. Identities = 34/228 (14%), Positives = 68/228 (29%), Gaps = 20/228 (8%) Query: 14 ALEQRLSTVADNMSNTDT--VGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 AL V N N +T G F + A N+ + +F K Sbjct: 395 ALTTMQDIV--NQLNANTDDNGDGNAINDFDDNFYATYNN--ETKTFQILPKNPSDGIYI 450 Query: 72 SFISTGTELDFALEGDAWFALESPRGIILT-RDGRFKVTDDGSLVSASGKYPVLDMASVP 130 S+ GT AL + +F S + I L R G + G V + Sbjct: 451 SYQDNGTNFAGALGINRFFDGNSAQNINLAMRYRDDPTLIRGYREAVEGNIVVANKMQQL 510 Query: 131 IQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLS 190 +N + E + T + + + ++ Sbjct: 511 QYNKVNFFDYNGNQYNETLADFFKLVTT-------------KIATDTADAKTSNEIKKAV 557 Query: 191 GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 +VK+ ++ S ++ E+ +I + + ++ +K + + Sbjct: 558 LTSVKQEYVSISEVSTDEELTNLIRFQGGYTANAKVVATLDKMLDTLL 605 Score = 35.2 bits (79), Expect = 8.4, Method: Composition-based stats. Identities = 5/28 (17%), Positives = 12/28 (42%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTD 30 +S N+ + +S +N++N Sbjct: 6 SSLNLAYTGLQTHQVMVSVTGNNIANAS 33 >gi|289679013|ref|ZP_06499903.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv. syringae FF5] Length = 560 Score = 43.3 bits (100), Expect = 0.027, Method: Composition-based stats. Identities = 11/38 (28%), Positives = 21/38 (55%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39 + +IGL+ A ++T+ +N +N DT G+ +V Sbjct: 1 MSLISIGLSGINASSAAINTIGNNTANVDTAGYSRQQV 38 >gi|289433989|ref|YP_003463861.1| flagellar basal-body rod protein FlgC [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|315301963|ref|ZP_07872959.1| flagellar basal-body rod protein FlgC [Listeria ivanovii FSL F6-596] gi|289170233|emb|CBH26773.1| flagellar basal-body rod protein FlgC [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|313629670|gb|EFR97807.1| flagellar basal-body rod protein FlgC [Listeria ivanovii FSL F6-596] gi|313639044|gb|EFS04033.1| flagellar basal-body rod protein FlgC [Listeria seeligeri FSL S4-171] Length = 136 Score = 43.3 bits (100), Expect = 0.027, Method: Composition-based stats. Identities = 9/40 (22%), Positives = 21/40 (52%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 G++ +N + EM ++ + + + T+ + NEK M + Sbjct: 90 GYVNYANVDMTAEMTNLMVGQKMYAANTSALQANEKMMEK 129 Score = 38.3 bits (87), Expect = 0.91, Method: Composition-based stats. Identities = 8/30 (26%), Positives = 15/30 (50%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTD 30 M N +A A +Q + ++N++N D Sbjct: 1 MFEGINTSGSALNAAKQWMEVSSNNIANAD 30 >gi|89075491|ref|ZP_01161902.1| flagellar basal body protein [Photobacterium sp. SKA34] gi|89048763|gb|EAR54334.1| flagellar basal body protein [Photobacterium sp. SKA34] Length = 131 Score = 43.3 bits (100), Expect = 0.027, Method: Composition-based stats. Identities = 13/38 (34%), Positives = 22/38 (57%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 E+R T+A N+SN +T G++ + FS + A + D Sbjct: 20 EKRAETLASNISNANTPGYKAKDLDFSRALKAATSGAD 57 >gi|219670132|ref|YP_002460567.1| flagellar basal-body rod protein FlgB [Desulfitobacterium hafniense DCB-2] gi|219540392|gb|ACL22131.1| flagellar basal-body rod protein FlgB [Desulfitobacterium hafniense DCB-2] Length = 133 Score = 43.3 bits (100), Expect = 0.027, Method: Composition-based stats. Identities = 11/55 (20%), Positives = 24/55 (43%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65 + A R +A+N++N DT F+ V F ++G ++ + + + Sbjct: 16 SLDASSLRYKVLANNVANVDTPDFKRSDVDFDLLLGEAMGQTGGELPLKVTSERH 70 >gi|188579865|ref|YP_001923310.1| flagellar basal body rod protein FlgC [Methylobacterium populi BJ001] gi|179343363|gb|ACB78775.1| flagellar basal-body rod protein FlgC [Methylobacterium populi BJ001] Length = 138 Score = 43.3 bits (100), Expect = 0.027, Method: Composition-based stats. Identities = 9/47 (19%), Positives = 19/47 (40%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G ++ N N + EM M + + + +I + + I + S Sbjct: 92 GNVKLPNVNMLVEMADMREANRSYEANLQVIKQARAMVASVIDLLKS 138 Score = 37.5 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 10/100 (10%), Positives = 29/100 (29%), Gaps = 8/100 (8%) Query: 8 GLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQKISFVA 60 A A R+ V++N++N + G + V F + ++ + Sbjct: 12 ASAGLEAQSLRMRVVSENLANAQSTGASPGADPYARKTVTFRAELDRAAGIASVRLREIG 71 Query: 61 S-GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 + + ++ + + + L + Sbjct: 72 TDDAPFRTEHDPANPAADENGNVKLPNVNMLVEMADMREA 111 >gi|83815671|ref|YP_446718.1| flagellar basal-body rod protein FlgC [Salinibacter ruber DSM 13855] gi|294508653|ref|YP_003572712.1| flagellar basal-body rod protein flgC [Salinibacter ruber M8] gi|83757065|gb|ABC45178.1| flagellar basal-body rod protein FlgC [Salinibacter ruber DSM 13855] gi|294344982|emb|CBH25760.1| Flagellar basal-body rod protein flgC [Salinibacter ruber M8] Length = 166 Score = 43.3 bits (100), Expect = 0.027, Method: Composition-based stats. Identities = 5/41 (12%), Positives = 16/41 (39%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 G++ + N EM +M + + + + ++ + Sbjct: 123 GYVHYPDVNVAQEMARMTSANRVYEANLSAVEATKSMAQRT 163 >gi|218506433|ref|ZP_03504311.1| flagellar basal body rod protein FlgC [Rhizobium etli Brasil 5] Length = 102 Score = 43.3 bits (100), Expect = 0.028, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 28/80 (35%), Gaps = 7/80 (8%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNT----DTVG---FRTIKVKFSEVVGAIKNDIDQKI 56 + I + A RL V++N++N DT G +R + F + + + + Sbjct: 7 AMKIAGSGLEAQSTRLRIVSENIANARSTGDTPGADPYRRKTITFGQQMDHVSGVETVNV 66 Query: 57 SFVASGKEYLSKEVGSFIST 76 V + S E Sbjct: 67 KKVGVDEGDFSTEFDPSNPA 86 >gi|57169005|ref|ZP_00368134.1| flagellar hook-associated protein 1 (HAP1) (flgK) [Campylobacter coli RM2228] gi|305432258|ref|ZP_07401421.1| flagellar hook-associated protein FlgK [Campylobacter coli JV20] gi|57019671|gb|EAL56360.1| flagellar hook-associated protein 1 (HAP1) (flgK) [Campylobacter coli RM2228] gi|304444606|gb|EFM37256.1| flagellar hook-associated protein FlgK [Campylobacter coli JV20] Length = 608 Score = 43.3 bits (100), Expect = 0.028, Method: Composition-based stats. Identities = 11/78 (14%), Positives = 23/78 (29%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 G+ A E +++T +N+SN + + +V + + Sbjct: 7 LYTGVTGLKASEVQIATTGNNISNANATFYTRQRVVQTTNGYITTGGVQVGTGTTVESIV 66 Query: 65 YLSKEVGSFISTGTELDF 82 L E + G Sbjct: 67 RLHDEYSYYKLKGASTQL 84 Score = 39.9 bits (91), Expect = 0.34, Method: Composition-based stats. Identities = 7/70 (10%), Positives = 21/70 (30%) Query: 169 FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228 + S N +V + S N+ E+ +I + + ++ Sbjct: 535 LTGKIGSDGENNNVVNASNQTLYNSVYSEYQSKSGVNTNEELAALIQWQSSYGAAAKIVT 594 Query: 229 ENEKSMLEAI 238 ++ + + Sbjct: 595 TVDQMLDTLL 604 >gi|237751238|ref|ZP_04581718.1| flagellar basal-body rod protein [Helicobacter bilis ATCC 43879] gi|229372604|gb|EEO22995.1| flagellar basal-body rod protein [Helicobacter bilis ATCC 43879] Length = 132 Score = 43.3 bits (100), Expect = 0.028, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 20/43 (46%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 +A R +A NM+N DT +R V F +++ + I Sbjct: 3 SALDYRSLRQDLIASNMANVDTPFYRPRDVHFEDMLAEKASQI 45 >gi|188534164|ref|YP_001907961.1| flagellar hook-associated protein FlgK [Erwinia tasmaniensis Et1/99] gi|188029206|emb|CAO97078.1| Flagellar hook-filament junction protein 1 [Erwinia tasmaniensis Et1/99] Length = 551 Score = 43.3 bits (100), Expect = 0.028, Method: Composition-based stats. Identities = 8/40 (20%), Positives = 15/40 (37%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 M N + A L+T ++N++N G+ Sbjct: 1 MANLINTAMTGLNAASAALNTTSNNITNYAVTGYSRQTTV 40 >gi|90579916|ref|ZP_01235724.1| flagellar hook-associated protein [Vibrio angustum S14] gi|90438801|gb|EAS63984.1| flagellar hook-associated protein [Vibrio angustum S14] Length = 778 Score = 43.3 bits (100), Expect = 0.028, Method: Composition-based stats. Identities = 8/47 (17%), Positives = 17/47 (36%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51 +G++ +++L + N+SN T G+ V Sbjct: 6 MQLGISGLRTSQKQLDVTSHNISNVHTAGYSRQVVDQKAADAQWSGG 52 >gi|302185576|ref|ZP_07262249.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv. syringae 642] Length = 686 Score = 43.3 bits (100), Expect = 0.028, Method: Composition-based stats. Identities = 11/38 (28%), Positives = 21/38 (55%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39 + +IGL+ A ++T+ +N +N DT G+ +V Sbjct: 1 MSLISIGLSGINASSAAINTIGNNTANVDTAGYSRQQV 38 >gi|228938858|ref|ZP_04101458.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228971739|ref|ZP_04132360.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228978348|ref|ZP_04138725.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis Bt407] gi|228781365|gb|EEM29566.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis Bt407] gi|228787829|gb|EEM35787.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228820707|gb|EEM66732.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326939358|gb|AEA15254.1| flagellar basal body rod protein FlgC [Bacillus thuringiensis serovar chinensis CT-43] Length = 137 Score = 43.3 bits (100), Expect = 0.028, Method: Composition-based stats. Identities = 7/40 (17%), Positives = 22/40 (55%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 G++ N + EM ++ + + + T++++ N+K + + Sbjct: 91 GYVRYPNIDVTAEMTNVMVTQKMYEANTSVLNANKKMLDK 130 Score = 42.2 bits (97), Expect = 0.058, Method: Composition-based stats. Identities = 5/33 (15%), Positives = 13/33 (39%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG 33 M + N + + + ++N+ N +T Sbjct: 1 MFQAINASGSGLTTARKWMEVTSNNIVNANTTA 33 >gi|296127541|ref|YP_003634793.1| flagellar basal-body rod protein FlgB [Brachyspira murdochii DSM 12563] gi|296019357|gb|ADG72594.1| flagellar basal-body rod protein FlgB [Brachyspira murdochii DSM 12563] Length = 142 Score = 43.3 bits (100), Expect = 0.028, Method: Composition-based stats. Identities = 9/66 (13%), Positives = 15/66 (22%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 R +ADN++N T F+ V F + + Sbjct: 20 LNVYGLRAEVIADNIANVSTPNFKRSDVTFEYQLARALDSEKYDGMEAKRTDSRHFPFHM 79 Query: 72 SFISTG 77 Sbjct: 80 PMNYQD 85 >gi|205375049|ref|ZP_03227840.1| flagellar hook-associated protein FlgK [Bacillus coahuilensis m4-4] Length = 511 Score = 43.3 bits (100), Expect = 0.028, Method: Composition-based stats. Identities = 9/51 (17%), Positives = 20/51 (39%), Gaps = 5/51 (9%) Query: 197 GFLED-----SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G +E+ S + EM M+ +N+ +I ++ + I + Sbjct: 457 GAVENRRMSTSQVSLDEEMTNMVQYQHAYNAAARMISLTDELLDTIINGMG 507 Score = 42.9 bits (99), Expect = 0.037, Method: Composition-based stats. Identities = 9/40 (22%), Positives = 16/40 (40%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 A + L T + N++N +T G+ +V S Sbjct: 6 GLETAKRAMNTSQSALYTTSHNIANANTPGYSRQQVSMST 45 >gi|209547926|ref|YP_002279843.1| flagellar basal body rod protein FlgC [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209533682|gb|ACI53617.1| flagellar basal-body rod protein FlgC [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 138 Score = 43.3 bits (100), Expect = 0.028, Method: Composition-based stats. Identities = 9/49 (18%), Positives = 21/49 (42%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 ++G ++ N N + EM M + +++ I + + I + S Sbjct: 89 QKGVVKLPNVNILVEMADMREANRSYDANLQTIKQTRDLISSTIDLLKS 137 Score = 42.2 bits (97), Expect = 0.062, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 22/54 (40%), Gaps = 7/54 (12%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNT----DTVG---FRTIKVKFSEVVGAIKN 50 + I + A RL V++N++N DT G +R + F + + Sbjct: 7 AMKIAGSGLEAQSTRLRIVSENIANARSTGDTPGADPYRRKTITFGQQMDRASG 60 >gi|90579905|ref|ZP_01235713.1| flagellar basal body protein [Vibrio angustum S14] gi|90438790|gb|EAS63973.1| flagellar basal body protein [Vibrio angustum S14] Length = 131 Score = 43.3 bits (100), Expect = 0.029, Method: Composition-based stats. Identities = 13/38 (34%), Positives = 22/38 (57%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 E+R T+A N+SN +T G++ + FS + A + D Sbjct: 20 EKRAETLASNISNANTPGYKAKDLDFSRALKAATSGAD 57 >gi|89902474|ref|YP_524945.1| flagellar basal-body rod protein FlgB [Rhodoferax ferrireducens T118] gi|89347211|gb|ABD71414.1| flagellar basal-body rod protein FlgB [Rhodoferax ferrireducens T118] Length = 150 Score = 43.3 bits (100), Expect = 0.029, Method: Composition-based stats. Identities = 11/77 (14%), Positives = 23/77 (29%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + + A + +R +A N++N DT G+ + F + + Sbjct: 5 MTSGLDFQAKALVLRAERQRVIASNIANADTPGYVARDLNFKDAMLQATGADSSSGLRTG 64 Query: 61 SGKEYLSKEVGSFISTG 77 + G Sbjct: 65 NSNSQGGGANGMTHPHH 81 >gi|229096230|ref|ZP_04227203.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock3-29] gi|229102343|ref|ZP_04233051.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock3-28] gi|229115185|ref|ZP_04244595.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock1-3] gi|228668325|gb|EEL23757.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock1-3] gi|228680990|gb|EEL35159.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock3-28] gi|228687190|gb|EEL41095.1| Flagellar basal-body rod protein FlgC [Bacillus cereus Rock3-29] Length = 137 Score = 43.3 bits (100), Expect = 0.029, Method: Composition-based stats. Identities = 7/40 (17%), Positives = 22/40 (55%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 G++ N + EM ++ + + + T++++ N+K + + Sbjct: 91 GYVRYPNIDVTAEMTNVMVAQKMYEANTSVLNANKKMLDK 130 Score = 41.8 bits (96), Expect = 0.077, Method: Composition-based stats. Identities = 5/33 (15%), Positives = 13/33 (39%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG 33 M + N + + + ++N+ N +T Sbjct: 1 MFQAMNASGSGLTTARKWMEVTSNNIVNANTTA 33 >gi|162147480|ref|YP_001601941.1| flagellar hook-associated protein [Gluconacetobacter diazotrophicus PAl 5] gi|161786057|emb|CAP55639.1| putative flagellar hook-associated protein [Gluconacetobacter diazotrophicus PAl 5] Length = 503 Score = 43.3 bits (100), Expect = 0.029, Method: Composition-based stats. Identities = 11/48 (22%), Positives = 24/48 (50%), Gaps = 2/48 (4%) Query: 1 MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46 M +S + + +E +L +++N+SN+ T G+ + + S V Sbjct: 1 MDLLSSLSTATSGLNGIEYQLGVLSNNVSNSSTTGYVSETAEVSSAVA 48 >gi|149202210|ref|ZP_01879183.1| flagellar basal-body rod protein FlgC [Roseovarius sp. TM1035] gi|149144308|gb|EDM32339.1| flagellar basal-body rod protein FlgC [Roseovarius sp. TM1035] Length = 138 Score = 43.3 bits (100), Expect = 0.029, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 31/88 (35%), Gaps = 7/88 (7%) Query: 1 MQTSFN-IGLAAQLALEQRLSTVADNMSN---TDTV---GFRTIKVKFSEVVGAIKNDID 53 M + + +A A RL+TVA NM+N T +R ++ F + Sbjct: 2 MIKNIFDVASSAMSAQMVRLNTVASNMANAQAVSTTKEEAYRPLRPVFETIYADQTGQSG 61 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELD 81 + V + + V ++ D Sbjct: 62 LSTTHVTDVVQLDREPVRAYRPDHPMAD 89 Score = 37.5 bits (85), Expect = 1.8, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 20/42 (47%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 GF+ +S N EM +M+ ++++ ++ + M + Sbjct: 92 GFVYESVVNPDEEMVEMVEASRQYQNVLETVSTLRTLMARTV 133 >gi|94968683|ref|YP_590731.1| flagellar basal-body rod protein FlgB [Candidatus Koribacter versatilis Ellin345] gi|94550733|gb|ABF40657.1| flagellar basal-body rod protein FlgB [Candidatus Koribacter versatilis Ellin345] Length = 118 Score = 43.3 bits (100), Expect = 0.029, Method: Composition-based stats. Identities = 12/72 (16%), Positives = 25/72 (34%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 N+ A R +A+NM+N DT G+ T + F+ + + + + + Sbjct: 9 LNVAERALDVSAARQRVIANNMANVDTPGYHTRDIDFAGQLRQMLGEASGGSQTTLASRN 68 Query: 65 YLSKEVGSFIST 76 + Sbjct: 69 VPGLVERPDGNN 80 >gi|86750925|ref|YP_487421.1| flagellar hook-associated protein [Rhodopseudomonas palustris HaA2] gi|86573953|gb|ABD08510.1| Flagellar hook-associated protein [Rhodopseudomonas palustris HaA2] Length = 623 Score = 43.3 bits (100), Expect = 0.029, Method: Composition-based stats. Identities = 14/121 (11%), Positives = 37/121 (30%) Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 P + K + + G A Q FV ++ S Sbjct: 503 PPTAAGDTTRPDFITKQLTSSKYLYSATTGIGSNAAPYNGTLESFLQQFVSQQGSNAQAA 562 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 + + T+++ + +S N EM ++ L +++ ++ + ++ Sbjct: 563 TQLASGQSVVLNTLQQKYATNSGVNMDEEMAHLLSLQNAYSANARVMSTVNQMYQTLMQA 622 Query: 241 I 241 + Sbjct: 623 M 623 Score = 40.6 bits (93), Expect = 0.19, Method: Composition-based stats. Identities = 10/49 (20%), Positives = 21/49 (42%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 + +I +A A + +S V+ N++N +T G+ V + Sbjct: 6 ALSIAMAGLRANQASMSLVSSNVANAETPGYVRKTVNQVTTLSGPSGSG 54 >gi|148259129|ref|YP_001233256.1| flagellar hook-associated protein FlgK [Acidiphilium cryptum JF-5] gi|146400810|gb|ABQ29337.1| flagellar hook-associated protein FlgK [Acidiphilium cryptum JF-5] Length = 485 Score = 43.3 bits (100), Expect = 0.029, Method: Composition-based stats. Identities = 10/49 (20%), Positives = 21/49 (42%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 I + A++Q+L+ V+ N++N +T G+ S + Sbjct: 6 GLAIASSGLSAIDQQLAVVSQNIANANTSGYSVETANLSAATAGGQGSG 54 >gi|332298485|ref|YP_004440407.1| flagellar hook-associated protein FlgK [Treponema brennaborense DSM 12168] gi|332181588|gb|AEE17276.1| flagellar hook-associated protein FlgK [Treponema brennaborense DSM 12168] Length = 629 Score = 43.3 bits (100), Expect = 0.029, Method: Composition-based stats. Identities = 7/41 (17%), Positives = 15/41 (36%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E+ +I +N+ I ++ + I + Sbjct: 588 SGVNVDEELADIIKFQHGYNAAAKFITVMDELLDTVINRLG 628 Score = 36.0 bits (81), Expect = 4.5, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 18/34 (52%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44 + +A Q +ST N+SN T G+ +V+ + Sbjct: 14 SLMAQSQSISTAGHNISNASTEGYSRQRVQLRQF 47 >gi|192292820|ref|YP_001993425.1| flagellar hook-associated protein FlgK [Rhodopseudomonas palustris TIE-1] gi|192286569|gb|ACF02950.1| flagellar hook-associated protein FlgK [Rhodopseudomonas palustris TIE-1] Length = 623 Score = 43.3 bits (100), Expect = 0.029, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 35/93 (37%) Query: 149 SQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMY 208 + G A + Q FV ++ S + + +++ T+++ F S N Sbjct: 531 TGIGSDAAPYKGTLLSYLQQFVSQQGSNAAAAQQLSEGQNVVLNTLQQKFSTSSGVNMDE 590 Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 EM ++ L + + ++ + ++ I Sbjct: 591 EMAHLLSLQNAYAANARVMSTINQMYQSLMQAI 623 Score = 39.9 bits (91), Expect = 0.29, Method: Composition-based stats. Identities = 13/92 (14%), Positives = 31/92 (33%), Gaps = 3/92 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + I +A + +S V+ N++N +T G+ V S V + + V + Sbjct: 6 ALAIAMAGLRVNQATMSLVSSNVANAETPGYVRKTVNQSAV---NAGETGTSVKVVGVDR 62 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESP 95 + + + + +A + Sbjct: 63 QLDDYILAQLRTETSGGAYASLRSDFLKQLQG 94 >gi|296283243|ref|ZP_06861241.1| flagellar basal body rod protein FlgB [Citromicrobium bathyomarinum JL354] Length = 124 Score = 43.3 bits (100), Expect = 0.029, Method: Composition-based stats. Identities = 10/35 (28%), Positives = 17/35 (48%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46 L R +A N++N DT G++ +V+ G Sbjct: 1 MRHLSDRQQVIAQNIANGDTPGYKAREVEAPSFAG 35 >gi|300024608|ref|YP_003757219.1| flagellar basal-body rod protein FlgC [Hyphomicrobium denitrificans ATCC 51888] gi|299526429|gb|ADJ24898.1| flagellar basal-body rod protein FlgC [Hyphomicrobium denitrificans ATCC 51888] Length = 139 Score = 43.3 bits (100), Expect = 0.029, Method: Composition-based stats. Identities = 9/51 (17%), Positives = 19/51 (37%), Gaps = 7/51 (13%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKN 50 + A R+ V++N++N T G ++ + F V+ Sbjct: 11 SAASGLFAQSSRMRVVSENIANASTTGKTPGADPYQRKTISFQSVMDENAG 61 Score = 42.5 bits (98), Expect = 0.048, Method: Composition-based stats. Identities = 14/101 (13%), Positives = 34/101 (33%) Query: 143 GEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDS 202 G + K I+ + + V+ + T + G ++ Sbjct: 38 KTPGADPYQRKTISFQSVMDENAGADLVQVDKISHDETPFETQYMPGNAAADSNGMVKMP 97 Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 N N + E+ M ++ + + T +I + + + I + S Sbjct: 98 NVNMLVELADMREASRSYTANTQVIKQVRELVSMTIDLMRS 138 >gi|168334477|ref|ZP_02692648.1| Flagellar basal body protein [Epulopiscium sp. 'N.t. morphotype B'] Length = 120 Score = 43.3 bits (100), Expect = 0.029, Method: Composition-based stats. Identities = 14/88 (15%), Positives = 35/88 (39%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + +I A A R + +N++N DTVG++ V+F ++ +K + Sbjct: 1 MFENIDITKKALDASMLRYQHLTNNIANIDTVGYKRTDVEFGSILARELQMNGRKNIDLN 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDA 88 + + + + + ++ + Sbjct: 61 RIQPRVYYDNAGARTRLDGNNIDIDKEM 88 >gi|23013710|ref|ZP_00053576.1| COG4786: Flagellar basal body rod protein [Magnetospirillum magnetotacticum MS-1] Length = 100 Score = 43.3 bits (100), Expect = 0.029, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 18/40 (45%), Gaps = 2/40 (5%) Query: 1 MQTSFN--IGLAAQLALEQRLSTVADNMSNTDTVGFRTIK 38 M +S L+ + T ADN++N T G++ + Sbjct: 1 MISSIASTTLLSGLATQSRVAQTAADNIANVTTPGYQAER 40 >gi|330445345|ref|ZP_08308997.1| flagellar basal-body rod protein FlgB [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489536|dbj|GAA03494.1| flagellar basal-body rod protein FlgB [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 131 Score = 43.3 bits (100), Expect = 0.030, Method: Composition-based stats. Identities = 9/37 (24%), Positives = 20/37 (54%) Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 +R T+A N++N +T G++ + F + A + + Sbjct: 21 KRAETLASNIANANTPGYKAKDIDFQRALNAATSGAN 57 >gi|317492431|ref|ZP_07950860.1| flagellar basal-body rod protein FlgB [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919770|gb|EFV41100.1| flagellar basal-body rod protein FlgB [Enterobacteriaceae bacterium 9_2_54FAA] Length = 149 Score = 43.3 bits (100), Expect = 0.030, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 20/65 (30%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR +A N++N DT GF+ + FS + S V Sbjct: 27 ALNLRAQRQEILAANIANADTPGFQARDIDFSSQLTRAIEQGRVNGSGVELKTTSSRHIP 86 Query: 71 GSFIS 75 Sbjct: 87 AQSFQ 91 >gi|217034660|ref|ZP_03440065.1| hypothetical protein HP9810_901g7 [Helicobacter pylori 98-10] gi|216942868|gb|EEC22359.1| hypothetical protein HP9810_901g7 [Helicobacter pylori 98-10] Length = 606 Score = 43.3 bits (100), Expect = 0.030, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 14/37 (37%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S + EM +I + + +I ++ + + Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVISTIDRMIDTLL 602 Score = 36.8 bits (83), Expect = 2.7, Method: Composition-based stats. Identities = 6/29 (20%), Positives = 11/29 (37%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTD 30 +S N A + + +N+SN Sbjct: 5 LSSLNASYTGLQAHQSMVDVTGNNISNAS 33 >gi|89895708|ref|YP_519195.1| hypothetical protein DSY2962 [Desulfitobacterium hafniense Y51] gi|89335156|dbj|BAE84751.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 129 Score = 43.3 bits (100), Expect = 0.030, Method: Composition-based stats. Identities = 11/55 (20%), Positives = 24/55 (43%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65 + A R +A+N++N DT F+ V F ++G ++ + + + Sbjct: 12 SLDASSLRYKVLANNVANVDTPDFKRSDVDFDLLLGEAMGQTGGELPLKVTSERH 66 >gi|27378285|ref|NP_769814.1| flagellar basal-body rod protein [Bradyrhizobium japonicum USDA 110] gi|27351432|dbj|BAC48439.1| flagellar basal-body rod protein [Bradyrhizobium japonicum USDA 110] Length = 149 Score = 43.3 bits (100), Expect = 0.030, Method: Composition-based stats. Identities = 10/32 (31%), Positives = 16/32 (50%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG 33 + F+I + A R+S A N++N T G Sbjct: 1 MSIFSIATSGLSAASLRVSVAASNIANISTTG 32 Score = 40.6 bits (93), Expect = 0.18, Method: Composition-based stats. Identities = 5/42 (11%), Positives = 15/42 (35%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G + N + E +++ F + +I ++ + Sbjct: 104 GLVAAPNVDLAGEFVELVTAKYSFIANAKVIQAYAETTESLL 145 >gi|317180851|dbj|BAJ58637.1| flagellar hook-associated protein FlgK [Helicobacter pylori F32] Length = 606 Score = 43.3 bits (100), Expect = 0.030, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 14/37 (37%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S + EM +I + + +I ++ + + Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVISTIDRMIDTLL 602 Score = 36.8 bits (83), Expect = 2.7, Method: Composition-based stats. Identities = 6/29 (20%), Positives = 11/29 (37%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTD 30 +S N A + + +N+SN Sbjct: 5 LSSLNASYTGLQAHQSMVDVTGNNISNAS 33 >gi|56695116|ref|YP_165463.1| flagellar hook-associated protein FlgK [Ruegeria pomeroyi DSS-3] gi|56676853|gb|AAV93519.1| flagellar hook-associated protein FlgK, putative [Ruegeria pomeroyi DSS-3] Length = 483 Score = 43.3 bits (100), Expect = 0.030, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 22/56 (39%), Gaps = 3/56 (5%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFV 59 + N L+ A + +DN++N T G+ + EV G +I V Sbjct: 6 ALNSALSGLTAASRATGVASDNIANALTPGYARRSL---EVAGNTIGGAGVRILGV 58 Score = 36.8 bits (83), Expect = 3.0, Method: Composition-based stats. Identities = 13/105 (12%), Positives = 35/105 (33%), Gaps = 1/105 (0%) Query: 135 QKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTV 194 Q+ F+ + T + + + + R S S + Sbjct: 379 QQINAFHQALTATRTPSDPRFGTGDMTANQVGAALLSRVAQNESLATERLTFASASRTEM 438 Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 ++ LE ++ E+ ++ + Q + + +I+ + M +R Sbjct: 439 QKLELEQG-VDTDVELQMLMQIEQAYAANARMIETVGEMMDTLLR 482 >gi|300870978|ref|YP_003785849.1| flagellar basal body rod protein FlgB [Brachyspira pilosicoli 95/1000] gi|300688677|gb|ADK31348.1| flagellar basal body rod protein, FlgB [Brachyspira pilosicoli 95/1000] Length = 142 Score = 43.3 bits (100), Expect = 0.031, Method: Composition-based stats. Identities = 12/70 (17%), Positives = 25/70 (35%), Gaps = 1/70 (1%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFS-EVVGAIKNDIDQKISFVASGKEYLSKEV 70 R +ADN++N T F+ V F ++ A+ ++ I + + + Sbjct: 20 LNVYGLRAEVIADNIANVSTPNFKRSDVTFEYQLARALDSEKYDGIEAKRTDPRHFPFNM 79 Query: 71 GSFISTGTEL 80 S + Sbjct: 80 PMDYSEVSPT 89 >gi|323527716|ref|YP_004229869.1| flagellar basal-body rod protein FlgB [Burkholderia sp. CCGE1001] gi|323384718|gb|ADX56809.1| flagellar basal-body rod protein FlgB [Burkholderia sp. CCGE1001] Length = 163 Score = 43.3 bits (100), Expect = 0.031, Method: Composition-based stats. Identities = 11/73 (15%), Positives = 23/73 (31%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A R ++ N++N DT G++ V F+ + ++ + Sbjct: 15 ALDVRAYRQELLSSNIANADTPGYKARDVDFASSLAGALKKTGATGHAASNTAALPMAQP 74 Query: 71 GSFISTGTELDFA 83 S + A Sbjct: 75 AGVTSGMSMAATA 87 >gi|255022067|ref|ZP_05294073.1| flagellar basal-body rod protein FlgC [Acidithiobacillus caldus ATCC 51756] gi|254968553|gb|EET26109.1| flagellar basal-body rod protein FlgC [Acidithiobacillus caldus ATCC 51756] Length = 141 Score = 43.3 bits (100), Expect = 0.031, Method: Composition-based stats. Identities = 8/45 (17%), Positives = 20/45 (44%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 K G++ SN N + M M+ ++ + T + + ++ + Sbjct: 96 KAGYVRGSNVNPIESMVDMLSASRAYQDDVTAANVLKTIAMKTLS 140 Score = 36.4 bits (82), Expect = 3.3, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 23/57 (40%), Gaps = 6/57 (10%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTD----TVG--FRTIKVKFSEVVGAIKNDI 52 + ++ AA A RL V N++N + + G ++ +V F V + Sbjct: 9 INALSVTGAAMSAQNARLGAVVSNLANANSVTSSTGTPYKAREVVFEAVPDGTASGG 65 >gi|39936992|ref|NP_949268.1| flagellar hook-associated protein [Rhodopseudomonas palustris CGA009] gi|39650849|emb|CAE29372.1| possible flagellar hook-associated protein 1 FlgK [Rhodopseudomonas palustris CGA009] Length = 623 Score = 43.3 bits (100), Expect = 0.031, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 35/93 (37%) Query: 149 SQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMY 208 + G A + Q FV ++ S + + +++ T+++ F S N Sbjct: 531 TGIGSDAAPYKGTLLSYLQQFVSQQGSNAAAAQQLSEGQNVVLNTLQQKFSTSSGVNMDE 590 Query: 209 EMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 EM ++ L + + ++ + ++ I Sbjct: 591 EMAHLLSLQNAYAANARVMSTINQMYQSLMQAI 623 Score = 39.9 bits (91), Expect = 0.31, Method: Composition-based stats. Identities = 13/92 (14%), Positives = 31/92 (33%), Gaps = 3/92 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + I +A + +S V+ N++N +T G+ V S V + + V + Sbjct: 6 ALAIAMAGLRVNQATMSLVSSNVANAETPGYVRKTVNQSAV---NAGETGTSVKVVGVDR 62 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESP 95 + + + + +A + Sbjct: 63 QLDDYILAQLRTETSGGAYASLRSDFLKQLQG 94 >gi|253997380|ref|YP_003049444.1| flagellar basal body rod protein [Methylotenera mobilis JLW8] gi|253984059|gb|ACT48917.1| flagellar basal body rod protein [Methylotenera mobilis JLW8] Length = 99 Score = 43.3 bits (100), Expect = 0.031, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 27/77 (35%) Query: 9 LAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSK 68 L+ A + RL A+N++N T F +V +++ G D K + A Sbjct: 7 LSGMNAAQARLDVAANNIANLSTDNFTRKEVVQADLPGGGTRVADIKSAAQAGSNLEADM 66 Query: 69 EVGSFISTGTELDFALE 85 + ++ Sbjct: 67 VEQLQARNTYMTNLSVF 83 >gi|239909138|ref|YP_002955880.1| flagellar basal-body rod protein FlgC [Desulfovibrio magneticus RS-1] gi|239799005|dbj|BAH77994.1| flagellar basal-body rod protein FlgC [Desulfovibrio magneticus RS-1] Length = 147 Score = 43.3 bits (100), Expect = 0.031, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 20/42 (47%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ + N + EM MI + + + ++ I + +A+ Sbjct: 101 GYVAYPDINVVEEMANMITAMRSYEASSSSIGTVKNMFNKAL 142 Score = 37.5 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 18/34 (52%), Gaps = 2/34 (5%) Query: 1 MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTV 32 M T+ +IG + A ++T++ N++N T Sbjct: 1 MDLFTAMDIGSSGMSAQRTTMNTISMNLANIKTT 34 >gi|209545589|ref|YP_002277818.1| flagellar hook-associated protein FlgK [Gluconacetobacter diazotrophicus PAl 5] gi|209533266|gb|ACI53203.1| flagellar hook-associated protein FlgK [Gluconacetobacter diazotrophicus PAl 5] Length = 503 Score = 43.3 bits (100), Expect = 0.031, Method: Composition-based stats. Identities = 11/48 (22%), Positives = 24/48 (50%), Gaps = 2/48 (4%) Query: 1 MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46 M +S + + +E +L +++N+SN+ T G+ + + S V Sbjct: 1 MDLLSSLSTATSGLNGIEYQLGVLSNNVSNSSTTGYVSETAEVSSAVA 48 >gi|313634361|gb|EFS00958.1| flagellar basal-body rod protein FlgC [Listeria seeligeri FSL N1-067] Length = 138 Score = 43.3 bits (100), Expect = 0.031, Method: Composition-based stats. Identities = 9/40 (22%), Positives = 21/40 (52%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 G++ +N + EM ++ + + + T+ + NEK M + Sbjct: 92 GYVNYANVDMTAEMTNLMVGQKMYAANTSALQANEKMMEK 131 Score = 38.3 bits (87), Expect = 1.0, Method: Composition-based stats. Identities = 8/30 (26%), Positives = 15/30 (50%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTD 30 M N +A A +Q + ++N++N D Sbjct: 1 MFEGINTSGSALNAAKQWMEVSSNNIANAD 30 >gi|256370952|ref|YP_003108776.1| flagellar basal body rod protein [Acidimicrobium ferrooxidans DSM 10331] gi|256007536|gb|ACU53103.1| flagellar basal body rod protein [Acidimicrobium ferrooxidans DSM 10331] Length = 111 Score = 43.3 bits (100), Expect = 0.031, Method: Composition-based stats. Identities = 14/90 (15%), Positives = 29/90 (32%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A AL+ + +A+N++N DT G+ V F + A + + V + Sbjct: 11 ALDALQIQSDAIANNVANVDTPGYIQSNVSFQSSLAAALANGGTATTSVTPSSNPVGLNG 70 Query: 71 GSFISTGTELDFALEGDAWFALESPRGIIL 100 + + A+ + Sbjct: 71 NNVSLGQELTQATTNAMDYQAVSNELTTYF 100 >gi|229592133|ref|YP_002874252.1| flagellar basal body rod protein FlgB [Pseudomonas fluorescens SBW25] gi|312962591|ref|ZP_07777081.1| flagellar basal-body rod protein FlgB [Pseudomonas fluorescens WH6] gi|229363999|emb|CAY51549.1| putative flagellar basal-body rod protein [Pseudomonas fluorescens SBW25] gi|311283171|gb|EFQ61762.1| flagellar basal-body rod protein FlgB [Pseudomonas fluorescens WH6] Length = 135 Score = 43.3 bits (100), Expect = 0.032, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 26/65 (40%) Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76 QR +A+N++N DT ++ + FS V+ A ++ + + G Sbjct: 21 QRAEVLANNIANADTPNYKARDLDFSAVLAAQQDKTKNGTFALNMTNSRHIEAQGLSSGD 80 Query: 77 GTELD 81 + L Sbjct: 81 ESLLY 85 >gi|15639647|ref|NP_219097.1| flagellar hook-associated protein FlgK [Treponema pallidum subsp. pallidum str. Nichols] gi|189025885|ref|YP_001933657.1| flagellar hook-associated protein FlgK [Treponema pallidum subsp. pallidum SS14] gi|3322960|gb|AAC65634.1| flagellar hook-associated protein 1 (flgK) [Treponema pallidum subsp. pallidum str. Nichols] gi|189018460|gb|ACD71078.1| flagellar hook-associated protein 1 [Treponema pallidum subsp. pallidum SS14] gi|291060027|gb|ADD72762.1| flagellar hook-associated protein FlgK [Treponema pallidum subsp. pallidum str. Chicago] Length = 625 Score = 43.3 bits (100), Expect = 0.032, Method: Composition-based stats. Identities = 7/42 (16%), Positives = 14/42 (33%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E+ +I +N+ I + + I + Sbjct: 583 TSGVNIDEELADIIKFQHGYNASARFIAAVNEMLDTVINRMG 624 Score = 35.6 bits (80), Expect = 6.5, Method: Composition-based stats. Identities = 16/110 (14%), Positives = 27/110 (24%), Gaps = 8/110 (7%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDIDQKISFVA 60 S +G A A +Q + T N+SN+ T G+ +V F + + Sbjct: 6 SIELGKRALYAHKQSVQTAGHNVSNSSTPGYSRQRVNLDSFEPLYRPDLSRAQLPGQIGQ 65 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTD 110 LD + R + Sbjct: 66 GVTIG-----SIARLRDQLLDSRIVSQTDEQGYWSTRDAYVRLLEQVYNE 110 >gi|146277710|ref|YP_001167869.1| flagellar basal-body rod protein FlgC [Rhodobacter sphaeroides ATCC 17025] gi|145555951|gb|ABP70564.1| flagellar basal-body rod protein FlgC [Rhodobacter sphaeroides ATCC 17025] Length = 138 Score = 43.3 bits (100), Expect = 0.032, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 31/87 (35%), Gaps = 6/87 (6%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDT------VGFRTIKVKFSEVVGAIKNDIDQK 55 F++G A A R++TVA N++N T FR ++ F Sbjct: 5 NNIFDVGARALSAQMVRMNTVASNLANAGTVSDTAETAFRPLRPVFETTYADAVGKSGLS 64 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDF 82 + VA+ + ++ + D Sbjct: 65 TTDVAAVVSLDREPARTYRPDHPQADA 91 >gi|327193034|gb|EGE59946.1| flagellar basal-body rod protein [Rhizobium etli CNPAF512] Length = 138 Score = 43.3 bits (100), Expect = 0.032, Method: Composition-based stats. Identities = 9/47 (19%), Positives = 19/47 (40%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G ++ N N + EM M + +++ I + + I + S Sbjct: 91 GVVKLPNVNVLVEMADMREANRSYDANLQTIKQTRDLISSTIDLLKS 137 Score = 42.2 bits (97), Expect = 0.058, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 28/80 (35%), Gaps = 7/80 (8%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNT----DTVG---FRTIKVKFSEVVGAIKNDIDQKI 56 + I + A RL V++N++N DT G +R + F + + + + Sbjct: 7 AMKIAGSGLEAQSTRLRIVSENIANARSTGDTPGADPYRRKTITFGQQMDHVSGVETVNV 66 Query: 57 SFVASGKEYLSKEVGSFIST 76 V + S E Sbjct: 67 KKVGVDEGDFSTEFDPSNPA 86 >gi|227112518|ref|ZP_03826174.1| flagellar basal body rod protein FlgB [Pectobacterium carotovorum subsp. brasiliensis PBR1692] gi|227328335|ref|ZP_03832359.1| flagellar basal body rod protein FlgB [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 138 Score = 43.3 bits (100), Expect = 0.032, Method: Composition-based stats. Identities = 11/65 (16%), Positives = 22/65 (33%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR +A N++N DT G++ + F+ + + +A + Sbjct: 15 ALNLRAQRQEILAANIANADTPGYQARDIDFASQLSKTMEQGRVNGTGIALKTTSVRHIP 74 Query: 71 GSFIS 75 Sbjct: 75 AQNFQ 79 >gi|157164728|ref|YP_001466716.1| flagellar hook-associated protein FlgK [Campylobacter concisus 13826] gi|157101468|gb|EAT97207.2| flagellar hook-associated protein FlgK [Campylobacter concisus 13826] Length = 623 Score = 43.3 bits (100), Expect = 0.032, Method: Composition-based stats. Identities = 8/77 (10%), Positives = 29/77 (37%), Gaps = 4/77 (5%) Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLE----DSNANSMYEMGQMIHLTQKFNS 222 +G+ R + ++ + + +++R E S ++ E+ +I + + Sbjct: 544 EGYYRYFTTDMASDTEANNTIHDTNTSLQRTAEEEFQSTSGVDTNEELTNLIRFQASYGA 603 Query: 223 ITTLIDENEKSMLEAIR 239 +I ++ + + Sbjct: 604 AAKIITTVDQMLDTLLS 620 Score = 41.8 bits (96), Expect = 0.093, Method: Composition-based stats. Identities = 11/80 (13%), Positives = 30/80 (37%), Gaps = 2/80 (2%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE--VVGAIKNDIDQKISFVAS 61 S G++ A + ++ST +N++N D+ + +V S + + + Sbjct: 7 SLGTGVSGLNAAQVQISTTGNNITNADSNYYTRQRVVQSASPAMNTVPGGVGTGTQVDTV 66 Query: 62 GKEYLSKEVGSFISTGTELD 81 + + + + L+ Sbjct: 67 TRLHDEFAYSRLKYSSSNLE 86 >gi|304321145|ref|YP_003854788.1| putative flagellar basal-body rod protein FlgC [Parvularcula bermudensis HTCC2503] gi|303300047|gb|ADM09646.1| putative flagellar basal-body rod protein FlgC [Parvularcula bermudensis HTCC2503] Length = 127 Score = 43.3 bits (100), Expect = 0.032, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 21/42 (50%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 TS I A R+ TV +N+SN DT G++ + FS Sbjct: 6 LTSLRIAGDGMNAQSFRMRTVNENLSNIDTPGYQRKMLTFST 47 Score = 40.6 bits (93), Expect = 0.20, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 17/43 (39%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 GF+E SN + + E+ + F++ + + I Sbjct: 80 GFVEMSNVDMLTELSDAREAKRSFDANIEAFRQAREMYAGLIS 122 >gi|297584032|ref|YP_003699812.1| flagellar basal-body rod protein FlgB [Bacillus selenitireducens MLS10] gi|297142489|gb|ADH99246.1| flagellar basal-body rod protein FlgB [Bacillus selenitireducens MLS10] Length = 134 Score = 43.3 bits (100), Expect = 0.033, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 22/42 (52%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51 + A +R T++DN++N DT ++ K F+ + +D Sbjct: 14 TSLNASARRQDTISDNVANVDTPNYKAKKTVFNHQLQRAMDD 55 >gi|160878464|ref|YP_001557432.1| flagellar hook-associated protein FlgK [Clostridium phytofermentans ISDg] gi|160427130|gb|ABX40693.1| flagellar hook-associated protein FlgK [Clostridium phytofermentans ISDg] Length = 613 Score = 43.3 bits (100), Expect = 0.033, Method: Composition-based stats. Identities = 14/97 (14%), Positives = 27/97 (27%), Gaps = 7/97 (7%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +IG + A + L+T A N++N +T GF V + +++ Sbjct: 7 GLSIGNSGLYASQAGLNTTAHNIANIETEGFSRQ-------VAKQQAGTALRVNSSYGMV 59 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL 100 G + D + Sbjct: 60 GTGVDIKGVTQIRDSYYDLKYMKNNTMYGAYSTKEYY 96 Score = 37.2 bits (84), Expect = 1.9, Method: Composition-based stats. Identities = 9/77 (11%), Positives = 21/77 (27%) Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 Q V + V+ L S + E ++ + +N + Sbjct: 537 QTLVAEIGIDAKQASNFAENQMNILSAVQNQRLSISGVDQEEEAMNLVRYQKAYNLSAKV 596 Query: 227 IDENEKSMLEAIRNIAS 243 I ++ I + + Sbjct: 597 ISIMDQIYDRLINYMGA 613 >gi|228984828|ref|ZP_04145000.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228775026|gb|EEM23420.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 137 Score = 43.3 bits (100), Expect = 0.033, Method: Composition-based stats. Identities = 7/40 (17%), Positives = 22/40 (55%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 G++ N + EM ++ + + + T++++ N+K + + Sbjct: 91 GYVRYPNIDVTAEMTNVMVAQKMYEANTSVLNANKKMLDK 130 Score = 41.8 bits (96), Expect = 0.092, Method: Composition-based stats. Identities = 5/33 (15%), Positives = 13/33 (39%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG 33 M + N + + + ++N+ N +T Sbjct: 1 MFQAINASGSGLTTARKWMEVTSNNIVNANTTA 33 >gi|237653586|ref|YP_002889900.1| flagellar basal-body rod protein FlgB [Thauera sp. MZ1T] gi|237624833|gb|ACR01523.1| flagellar basal-body rod protein FlgB [Thauera sp. MZ1T] Length = 134 Score = 43.3 bits (100), Expect = 0.033, Method: Composition-based stats. Identities = 10/56 (17%), Positives = 20/56 (35%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65 A R +A N++N DT ++ V F + N + + + + Sbjct: 14 TALNLQAHRQQLIASNIANADTPHYKARDVDFRAALQGALNASREGVQMATTQAGH 69 >gi|300722675|ref|YP_003711965.1| flagellar hook-filament junction protein 1 [Xenorhabdus nematophila ATCC 19061] gi|297629182|emb|CBJ89778.1| flagellar biosynthesis; hook-filament junction protein 1 [Xenorhabdus nematophila ATCC 19061] Length = 546 Score = 42.9 bits (99), Expect = 0.033, Method: Composition-based stats. Identities = 13/84 (15%), Positives = 29/84 (34%), Gaps = 1/84 (1%) Query: 1 MQTSF-NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFV 59 M S N ++ A + + V +N++N+ + + ++ G + V Sbjct: 1 MSNSLMNTAMSGINAAQVAMGVVGNNIANSKSADYNRQTTVMTQNNGTMSPVGFVGNGVV 60 Query: 60 ASGKEYLSKEVGSFISTGTELDFA 83 SG E + + +A Sbjct: 61 VSGINREYSEFITQQHNAAQTKYA 84 >gi|187932920|ref|YP_001885038.1| flagellar basal body rod protein FlgB [Clostridium botulinum B str. Eklund 17B] gi|187721073|gb|ACD22294.1| flagellar basal-body rod protein FlgB [Clostridium botulinum B str. Eklund 17B] Length = 133 Score = 42.9 bits (99), Expect = 0.033, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 31/78 (39%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A R +A+NM+N +T G++ V F E + + D + S + ++ Sbjct: 18 GLKASNARSKAIANNMANINTKGYKKFNVIFEENLKNNSDKKDLSLKITNSRHLRGNNDL 77 Query: 71 GSFISTGTELDFALEGDA 88 I E + ++ D Sbjct: 78 NGDIEVVREENTSMRTDD 95 >gi|70731826|ref|YP_261568.1| flagellar basal body rod protein FlgB [Pseudomonas fluorescens Pf-5] gi|68346125|gb|AAY93731.1| flagellar basal-body rod protein FlgB [Pseudomonas fluorescens Pf-5] Length = 155 Score = 42.9 bits (99), Expect = 0.034, Method: Composition-based stats. Identities = 11/65 (16%), Positives = 23/65 (35%) Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76 +R +A+N++N DT ++ + FS V+ + + G Sbjct: 41 KRAEVLANNIANADTPNYKARDLDFSAVLAEQNQKAQNGTFALNMTNNRHIEAQGLSSGD 100 Query: 77 GTELD 81 + L Sbjct: 101 ESLLY 105 >gi|255321465|ref|ZP_05362623.1| flagellar basal-body rod protein FlgB [Campylobacter showae RM3277] gi|255301321|gb|EET80580.1| flagellar basal-body rod protein FlgB [Campylobacter showae RM3277] Length = 145 Score = 42.9 bits (99), Expect = 0.034, Method: Composition-based stats. Identities = 9/58 (15%), Positives = 20/58 (34%), Gaps = 6/58 (10%) Query: 1 MQTSFNIGLA------AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + A + R ++ N++N DT ++ + F + +I Sbjct: 1 MFAGIQTSKSKPLVESALASRNLRQQMISSNIANIDTPFYKARDIAFEAALSQTAQEI 58 >gi|183220164|ref|YP_001838160.1| flagellar basal body rod protein FlgB [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189910284|ref|YP_001961839.1| flagellar basal body rod protein FlgB [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167774960|gb|ABZ93261.1| Endoflagellar proximal basal body rod protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167778586|gb|ABZ96884.1| Flagellar basal-body rod protein FlgB [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 143 Score = 42.9 bits (99), Expect = 0.034, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 17/41 (41%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51 A QR + DN++N D F+ +V F ++ Sbjct: 17 GLGAATQRRKVITDNIANADVPNFKRSEVVFESMLKRAIES 57 >gi|89098647|ref|ZP_01171529.1| flagellar basal-body rod protein B [Bacillus sp. NRRL B-14911] gi|89086609|gb|EAR65728.1| flagellar basal-body rod protein B [Bacillus sp. NRRL B-14911] Length = 135 Score = 42.9 bits (99), Expect = 0.034, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 30/88 (34%), Gaps = 2/88 (2%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK--NDIDQKISFVA 60 + + + + VA N++N DT ++ V F V+ + I+ K + V Sbjct: 9 NTISTLENSLNQASLKQKVVAQNIANADTPNYKAKDVSFKSVLQSEMAIGGIEAKRTDVR 68 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDA 88 S + DF G+ Sbjct: 69 HYSFAAEGSGQSGVIINKNTDFNHNGNN 96 >gi|325982365|ref|YP_004294767.1| flagellar hook-associated protein FlgK [Nitrosomonas sp. AL212] gi|325531884|gb|ADZ26605.1| flagellar hook-associated protein FlgK [Nitrosomonas sp. AL212] Length = 638 Score = 42.9 bits (99), Expect = 0.034, Method: Composition-based stats. Identities = 13/82 (15%), Positives = 29/82 (35%), Gaps = 1/82 (1%) Query: 1 MQTS-FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFV 59 M +IG++ L + +L T + N+SN T G+ +V + Sbjct: 1 MGNGILDIGISGLLTAQNQLLTTSHNISNVATPGYNRQQVILNTNTPQSSGAGFVGRGVH 60 Query: 60 ASGKEYLSKEVGSFISTGTELD 81 ++ + + + S + Sbjct: 61 STTVQRIYNQFLVNQSLQIQTQ 82 Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 18/146 (12%), Positives = 39/146 (26%), Gaps = 3/146 (2%) Query: 94 SPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK 153 T G SG D+ ++ + + N G + K Sbjct: 494 PATNQAYTEGADISFN--GYTFQISGNPAAGDIFTITPNLNGSADNRNALLLGALQTKNT 551 Query: 154 VIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQM 213 V Y Q V + + + + ++ S N E + Sbjct: 552 VENGTASYQSAYGQ-LVSQIGNKTRELEVTSKSQANFLAQIENTIQSTSGVNLDEEAANL 610 Query: 214 IHLTQKFNSITTLIDENEKSMLEAIR 239 + Q + + + +I+ + +R Sbjct: 611 MRFQQAYQAASKIIEMSNTLFDSILR 636 >gi|253688975|ref|YP_003018165.1| flagellar basal-body rod protein FlgB [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251755553|gb|ACT13629.1| flagellar basal-body rod protein FlgB [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 138 Score = 42.9 bits (99), Expect = 0.034, Method: Composition-based stats. Identities = 11/65 (16%), Positives = 22/65 (33%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR +A N++N DT G++ + F+ + + +A + Sbjct: 15 ALNLRAQRQEILAANIANADTPGYQARDIDFASQLSKTMEQGRVNGTGIALKTTSVRHIP 74 Query: 71 GSFIS 75 Sbjct: 75 AQNFQ 79 >gi|218516085|ref|ZP_03512925.1| flagellar basal body rod protein FlgC [Rhizobium etli 8C-3] Length = 132 Score = 42.9 bits (99), Expect = 0.034, Method: Composition-based stats. Identities = 9/47 (19%), Positives = 19/47 (40%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G ++ N N + EM M + +++ I + + I + S Sbjct: 85 GVVKLPNVNVLVEMADMREANRSYDANLQTIKQTRDLISSTIDLLKS 131 Score = 42.2 bits (97), Expect = 0.066, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 27/80 (33%), Gaps = 7/80 (8%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNT----DTVG---FRTIKVKFSEVVGAIKNDIDQKI 56 + I + A RL V++N++N DT G +R + F + + + Sbjct: 1 AMKIAGSGLEAQSTRLRIVSENIANARSTGDTPGADPYRRKTITFGQQMDRASGVETVNV 60 Query: 57 SFVASGKEYLSKEVGSFIST 76 V + S E Sbjct: 61 KKVGVDEGDFSTEFDPSNPA 80 >gi|308186399|ref|YP_003930530.1| Flagellar hook-associated protein 1 (HAP1) [Pantoea vagans C9-1] gi|308056909|gb|ADO09081.1| Flagellar hook-associated protein 1 (HAP1) [Pantoea vagans C9-1] Length = 550 Score = 42.9 bits (99), Expect = 0.035, Method: Composition-based stats. Identities = 15/159 (9%), Positives = 48/159 (30%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + N ++ A + LST ++N+SN G+ ++ ++ + Sbjct: 1 MSSIINSAMSGLSAAQAALSTTSNNISNYTVAGYSRQTTVLAQANSTLQGNSYYGNGVNI 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 +G + + G+ +++ + + ++ T + G + Sbjct: 61 TGVQREYDAFIATQLRGSSANYSAVSTQHSQISNIDDLLSTSTTSLSTSLQGFFTNLQNV 120 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG 159 + S + + + + ++ Sbjct: 121 VSNANDPSARQSMLSNAQGLVSQFQTSAQYLNNMQNSVN 159 >gi|283956843|ref|ZP_06374316.1| putative flagellar hook-associated protein FlgK [Campylobacter jejuni subsp. jejuni 1336] gi|283791569|gb|EFC30365.1| putative flagellar hook-associated protein FlgK [Campylobacter jejuni subsp. jejuni 1336] Length = 608 Score = 42.9 bits (99), Expect = 0.035, Method: Composition-based stats. Identities = 8/36 (22%), Positives = 17/36 (47%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 G+ A E +++T +N+SN + + +V Sbjct: 7 LYTGVTGLKASEVQIATTGNNISNANATFYTRQRVV 42 Score = 39.9 bits (91), Expect = 0.35, Method: Composition-based stats. Identities = 5/48 (10%), Positives = 18/48 (37%) Query: 191 GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 +V + S N+ E+ +I + + ++ ++ + + Sbjct: 557 YNSVYSEYQSKSGVNTNEELAALIQYQSSYGAAAKIVSTVDQMLDTLL 604 >gi|148925638|ref|ZP_01809326.1| putative flagellar hook-associated protein [Campylobacter jejuni subsp. jejuni CG8486] gi|145845648|gb|EDK22739.1| putative flagellar hook-associated protein [Campylobacter jejuni subsp. jejuni CG8486] Length = 608 Score = 42.9 bits (99), Expect = 0.035, Method: Composition-based stats. Identities = 8/36 (22%), Positives = 17/36 (47%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 G+ A E +++T +N+SN + + +V Sbjct: 7 LYTGVTGLKASEVQIATTGNNISNANATFYTRQRVV 42 Score = 39.9 bits (91), Expect = 0.35, Method: Composition-based stats. Identities = 5/48 (10%), Positives = 18/48 (37%) Query: 191 GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 +V + S N+ E+ +I + + ++ ++ + + Sbjct: 557 YNSVYSEYQSKSGVNTNEELAALIQYQSSYGAAAKIVSTVDQMLDTLL 604 >gi|327393477|dbj|BAK10899.1| flagellar hook-associated protein 1 [Pantoea ananatis AJ13355] Length = 546 Score = 42.9 bits (99), Expect = 0.035, Method: Composition-based stats. Identities = 21/182 (11%), Positives = 52/182 (28%), Gaps = 3/182 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISF 58 M + N ++ A + LST ++N+SN G+ +E ++ ++ Sbjct: 1 MSSIINSAMSGLSAAQAALSTTSNNISNYTVAGYSRQTTILAEANSTLQGKSYYGNGVNV 60 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDG-SLVSA 117 +EY S + + A + + T + + ++ + Sbjct: 61 TGVQREYDSFIAAQLRGSSATYNAANTQYSQVSNIDDLMSTSTTNLSTAIQGFFSNMQNV 120 Query: 118 SGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGI 177 + Q + ++ + T VD F + ++ Sbjct: 121 VSNANDPAARQSMLSNSQGLVNQFQTQAQYLTNMQNSVNTNIASDVDQINTFTTQISNLN 180 Query: 178 SP 179 Sbjct: 181 QQ 182 >gi|269796400|ref|YP_003315855.1| flagellar basal-body rod protein FlgC [Sanguibacter keddieii DSM 10542] gi|269098585|gb|ACZ23021.1| flagellar basal-body rod protein FlgC [Sanguibacter keddieii DSM 10542] Length = 134 Score = 42.9 bits (99), Expect = 0.035, Method: Composition-based stats. Identities = 24/140 (17%), Positives = 47/140 (33%), Gaps = 10/140 (7%) Query: 100 LTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG 159 +T G + G V+ V D + + DE S G G Sbjct: 1 MTTFGAIGIASTGMTVNRKWLDAVSDNLANINTVRPSDEAAFQARYVVASAVGYPENGQG 60 Query: 160 LYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 + + G G + P PL D G+++ + +M QMI + Sbjct: 61 VQVAGIELG----SAEGRMVHEPDHPLADAE------GYVKYPEVDMAGQMSQMIMAQRG 110 Query: 220 FNSITTLIDENEKSMLEAIR 239 + + +++D + + A++ Sbjct: 111 YQANASVVDRAKATYEAALQ 130 Score = 39.5 bits (90), Expect = 0.38, Method: Composition-based stats. Identities = 15/85 (17%), Positives = 22/85 (25%), Gaps = 6/85 (7%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKIS 57 + I + L V+DN++N +TV F+ V S V Q Sbjct: 6 AIGIASTGMTVNRKWLDAVSDNLANINTVRPSDEAAFQARYVVASAVGYPENGQGVQVAG 65 Query: 58 FVASGKEYLSKEVGSFISTGTELDF 82 E E Sbjct: 66 IELGSAEGRMVHEPDHPLADAEGYV 90 >gi|205373368|ref|ZP_03226172.1| flagellar basal body rod protein FlgB [Bacillus coahuilensis m4-4] Length = 133 Score = 42.9 bits (99), Expect = 0.035, Method: Composition-based stats. Identities = 13/76 (17%), Positives = 26/76 (34%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69 A + ++ N++N DT ++ VKF DI ++ + Sbjct: 14 AGLNYSTDKQKAISQNIANVDTPNYKAKDVKFESYFKKSVADIQANVTSDKHMSFKPTSA 73 Query: 70 VGSFISTGTELDFALE 85 G+ + + DF Sbjct: 74 TGTSAAPYSSSDFIYH 89 >gi|121612872|ref|YP_001001115.1| flagellar hook-associated protein FlgK [Campylobacter jejuni subsp. jejuni 81-176] gi|87249591|gb|EAQ72550.1| flagellar hook-associated protein FlgK, putative [Campylobacter jejuni subsp. jejuni 81-176] Length = 608 Score = 42.9 bits (99), Expect = 0.035, Method: Composition-based stats. Identities = 8/36 (22%), Positives = 17/36 (47%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 G+ A E +++T +N+SN + + +V Sbjct: 7 LYTGVTGLKASEVQIATTGNNISNANATFYTRQRVV 42 Score = 39.9 bits (91), Expect = 0.35, Method: Composition-based stats. Identities = 5/48 (10%), Positives = 18/48 (37%) Query: 191 GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 +V + S N+ E+ +I + + ++ ++ + + Sbjct: 557 YNSVYSEYQSKSGVNTNEELAALIQYQSSYGAAAKIVSTVDQMLDTLL 604 >gi|220925381|ref|YP_002500683.1| flagellar basal body rod protein FlgB [Methylobacterium nodulans ORS 2060] gi|219949988|gb|ACL60380.1| flagellar basal body rod protein [Methylobacterium nodulans ORS 2060] Length = 134 Score = 42.9 bits (99), Expect = 0.036, Method: Composition-based stats. Identities = 7/29 (24%), Positives = 14/29 (48%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIK 38 + R +A+N++N +T GF+ Sbjct: 14 NRMQWHQTRQKVLAENVANANTPGFKARD 42 >gi|190890361|ref|YP_001976903.1| flagellar basal-body rod protein [Rhizobium etli CIAT 652] gi|190695640|gb|ACE89725.1| flagellar basal-body rod protein [Rhizobium etli CIAT 652] Length = 138 Score = 42.9 bits (99), Expect = 0.036, Method: Composition-based stats. Identities = 9/47 (19%), Positives = 19/47 (40%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G ++ N N + EM M + +++ I + + I + S Sbjct: 91 GVVKLPNVNVLVEMADMREANRSYDANLQTIKQTRDLISSTIDLLKS 137 Score = 41.8 bits (96), Expect = 0.074, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 27/80 (33%), Gaps = 7/80 (8%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNT----DTVG---FRTIKVKFSEVVGAIKNDIDQKI 56 + I + A RL V++N++N DT G +R + F + + + Sbjct: 7 AMKIAGSGLEAQSTRLRIVSENIANARSTGDTPGADPYRRKTITFGQQMDRASGVETVNV 66 Query: 57 SFVASGKEYLSKEVGSFIST 76 V + S E Sbjct: 67 KKVGVDEGDFSTEFDPSNPA 86 >gi|86153170|ref|ZP_01071375.1| flagellar hook-associated protein FlgK [Campylobacter jejuni subsp. jejuni HB93-13] gi|85844055|gb|EAQ61265.1| flagellar hook-associated protein FlgK [Campylobacter jejuni subsp. jejuni HB93-13] Length = 608 Score = 42.9 bits (99), Expect = 0.036, Method: Composition-based stats. Identities = 8/36 (22%), Positives = 17/36 (47%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 G+ A E +++T +N+SN + + +V Sbjct: 7 LYTGVTGLKASEVQIATTGNNISNANATFYTRQRVV 42 Score = 39.9 bits (91), Expect = 0.37, Method: Composition-based stats. Identities = 5/48 (10%), Positives = 18/48 (37%) Query: 191 GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 +V + S N+ E+ +I + + ++ ++ + + Sbjct: 557 YNSVYSEYQSKSGVNTNEELAALIQYQSSYGAAAKIVSTVDQMLDTLL 604 >gi|329890582|ref|ZP_08268925.1| flagellar basal-body rod protein FlgC [Brevundimonas diminuta ATCC 11568] gi|328845883|gb|EGF95447.1| flagellar basal-body rod protein FlgC [Brevundimonas diminuta ATCC 11568] Length = 144 Score = 42.9 bits (99), Expect = 0.036, Method: Composition-based stats. Identities = 5/42 (11%), Positives = 17/42 (40%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G+++ N +++ E M + + + +I+ + Sbjct: 98 GYVQRPNVDTLVEAMDMREAQRAYEANLNVIETARNMDSRTL 139 Score = 40.2 bits (92), Expect = 0.24, Method: Composition-based stats. Identities = 9/49 (18%), Positives = 21/49 (42%), Gaps = 7/49 (14%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSE 43 T+ + +A A + R+ +A+N++N ++ +R F Sbjct: 14 NTAMAVASSALKAQQSRMRIIAENIANAESTANVAGGQPYRRQTPVFQA 62 >gi|283850788|ref|ZP_06368074.1| flagellar basal body rod protein [Desulfovibrio sp. FW1012B] gi|283573711|gb|EFC21685.1| flagellar basal body rod protein [Desulfovibrio sp. FW1012B] Length = 121 Score = 42.9 bits (99), Expect = 0.036, Method: Composition-based stats. Identities = 4/37 (10%), Positives = 14/37 (37%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S+ + ++ M ++ F + +I + + Sbjct: 81 SDVDLAGQVVSMTLASRTFEANAAVIRTADDMAGTLL 117 >gi|218672513|ref|ZP_03522182.1| flagellar basal body rod protein FlgC [Rhizobium etli GR56] Length = 138 Score = 42.9 bits (99), Expect = 0.036, Method: Composition-based stats. Identities = 9/49 (18%), Positives = 21/49 (42%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 ++G ++ N N + EM M + +++ I + + I + S Sbjct: 89 QKGVVKLPNVNILVEMADMREANRSYDANLQTIKQTRDLISSTIDLLKS 137 Score = 41.8 bits (96), Expect = 0.080, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 27/80 (33%), Gaps = 7/80 (8%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNT----DTVG---FRTIKVKFSEVVGAIKNDIDQKI 56 + I + A RL V++N++N DT G +R + F + + + Sbjct: 7 AMKIAGSGLEAQSTRLRIVSENIANARSTGDTPGADPYRRKTITFGQQMDRASGVETVNV 66 Query: 57 SFVASGKEYLSKEVGSFIST 76 V + S E Sbjct: 67 KKVGVDEGDFSTEFDPSNPA 86 >gi|89895774|ref|YP_519261.1| hypothetical protein DSY3028 [Desulfitobacterium hafniense Y51] gi|89335222|dbj|BAE84817.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 533 Score = 42.9 bits (99), Expect = 0.037, Method: Composition-based stats. Identities = 8/53 (15%), Positives = 18/53 (33%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK 55 + + A + + L T N++N +T+G+ V + Sbjct: 6 SGLELARRALESQQIALDTTGHNIANANTIGYTRQVVNLQATSPDSIPGMGHY 58 Score = 39.5 bits (90), Expect = 0.47, Method: Composition-based stats. Identities = 2/39 (5%), Positives = 14/39 (35%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 N E+ ++ + + + ++ + + + + Sbjct: 492 VNMDEEITNLVKFQKSYTAAARIVTMLDSMLDTIVNGMG 530 >gi|315127356|ref|YP_004069359.1| flagellar biosynthesis; cell-proximal portion of basal-body rod [Pseudoalteromonas sp. SM9913] gi|315015870|gb|ADT69208.1| flagellar biosynthesis; cell-proximal portion of basal-body rod [Pseudoalteromonas sp. SM9913] Length = 136 Score = 42.9 bits (99), Expect = 0.037, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 28/55 (50%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65 A L QR +A N++N DT G++ + F+ + K++ + V + +++ Sbjct: 15 AMLIRSQRAEMLATNIANADTPGYKAKDIDFASALKTAKSNQLSGNTMVRTNEKH 69 >gi|188588215|ref|YP_001920199.1| flagellar basal body rod protein FlgB [Clostridium botulinum E3 str. Alaska E43] gi|188498496|gb|ACD51632.1| flagellar basal-body rod protein FlgB [Clostridium botulinum E3 str. Alaska E43] Length = 133 Score = 42.9 bits (99), Expect = 0.037, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 20/43 (46%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 A R +A+NM+N +T G++ V F E + N D Sbjct: 18 GLKASNARSKAIANNMANINTKGYKKFNVIFEENLKNNSNTKD 60 >gi|261821150|ref|YP_003259256.1| flagellar basal body rod protein FlgB [Pectobacterium wasabiae WPP163] gi|261605163|gb|ACX87649.1| flagellar basal-body rod protein FlgB [Pectobacterium wasabiae WPP163] Length = 138 Score = 42.9 bits (99), Expect = 0.037, Method: Composition-based stats. Identities = 11/65 (16%), Positives = 22/65 (33%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR +A N++N DT G++ + F+ + + +A + Sbjct: 15 ALNLRAQRQEILAANIANADTPGYQARDIDFASQLSKTMEQGRVNGTGIALKTTSVRHIP 74 Query: 71 GSFIS 75 Sbjct: 75 AQNFQ 79 >gi|217077496|ref|YP_002335214.1| flagellar basal-body rod protein FlgB [Thermosipho africanus TCF52B] gi|217037351|gb|ACJ75873.1| flagellar basal-body rod protein FlgB [Thermosipho africanus TCF52B] Length = 127 Score = 42.9 bits (99), Expect = 0.037, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 23/50 (46%), Gaps = 1/50 (2%) Query: 1 MQTS-FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK 49 M S F+ AA +R + N++N +T ++ + F E++ K Sbjct: 1 MFNSNFSTLKAAMDVALKRQEIHSQNIANAETPNYKRKYIVFEELLNESK 50 >gi|302391042|ref|YP_003826862.1| flagellar hook-associated protein FlgK [Acetohalobium arabaticum DSM 5501] gi|302203119|gb|ADL11797.1| flagellar hook-associated protein FlgK [Acetohalobium arabaticum DSM 5501] Length = 801 Score = 42.9 bits (99), Expect = 0.037, Method: Composition-based stats. Identities = 7/40 (17%), Positives = 15/40 (37%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 S + EM +MI Q + + ++ + + I Sbjct: 760 SGVSLDEEMSKMIKYQQSYTAAAKFTSTMDEILNTLVNGI 799 Score = 38.7 bits (88), Expect = 0.74, Method: Composition-based stats. Identities = 8/37 (21%), Positives = 15/37 (40%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39 + +G A + L N+SN +T G+ + Sbjct: 6 SGIELGKRALQVQRKSLDVTGHNISNANTEGYSRQEA 42 >gi|156934434|ref|YP_001438350.1| flagellar hook-associated protein FlgK [Cronobacter sakazakii ATCC BAA-894] gi|156532688|gb|ABU77514.1| hypothetical protein ESA_02265 [Cronobacter sakazakii ATCC BAA-894] Length = 552 Score = 42.9 bits (99), Expect = 0.037, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 35/98 (35%), Gaps = 6/98 (6%) Query: 1 MQTSF-NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFV 59 M +S N ++ A + LSTV++N+SN + G+ V N + +V Sbjct: 1 MSSSLINSAMSGLSAAQTALSTVSNNISNYNVAGYTRQTT-----VLGQSNSTMTQGGWV 55 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRG 97 +G + +L+ A + + Sbjct: 56 GNGVYVSGIQREYDAFITNQLNAAQNQSSGLTTRYEQM 93 >gi|313901989|ref|ZP_07835405.1| flagellar basal body rod protein FlgB [Thermaerobacter subterraneus DSM 13965] gi|313467778|gb|EFR63276.1| flagellar basal body rod protein FlgB [Thermaerobacter subterraneus DSM 13965] Length = 70 Score = 42.9 bits (99), Expect = 0.038, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 19/40 (47%) Query: 9 LAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI 48 A L R +A N++N +T G++ + F+ + A Sbjct: 10 AAGLEVLALRQRLLAQNVANAETPGYKRYDLDFARALEAA 49 >gi|300716224|ref|YP_003741027.1| flagellar hook-filament junction protein 1 [Erwinia billingiae Eb661] gi|299062060|emb|CAX59176.1| Flagellar hook-filament junction protein 1 [Erwinia billingiae Eb661] Length = 550 Score = 42.9 bits (99), Expect = 0.038, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 26/69 (37%), Gaps = 1/69 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M N L+ A L+T ++N+SN G+ ++ G+ + + + V+ Sbjct: 1 MSNLINTALSGINAASAALNTTSNNISNYSVAGYSRQTTVLAQA-GSTLSGTNYYGNGVS 59 Query: 61 SGKEYLSKE 69 + Sbjct: 60 VASVNREYD 68 >gi|297570285|ref|YP_003691629.1| flagellar hook-associated protein FlgK [Desulfurivibrio alkaliphilus AHT2] gi|296926200|gb|ADH87010.1| flagellar hook-associated protein FlgK [Desulfurivibrio alkaliphilus AHT2] Length = 870 Score = 42.9 bits (99), Expect = 0.038, Method: Composition-based stats. Identities = 8/33 (24%), Positives = 14/33 (42%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTI 37 N A L ++ + N++N DT G+ Sbjct: 8 LNTAKQALLTQQRSIQVTGHNVANVDTPGYSRQ 40 Score = 42.5 bits (98), Expect = 0.044, Method: Composition-based stats. Identities = 6/41 (14%), Positives = 17/41 (41%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S + EM +I + + LI +++ ++ + + Sbjct: 830 SGVSLDEEMANLIKFQHAYTAAARLISTSDEMLVTLLDTVR 870 >gi|223040425|ref|ZP_03610699.1| flagellar basal-body rod protein FlgB [Campylobacter rectus RM3267] gi|222878275|gb|EEF13382.1| flagellar basal-body rod protein FlgB [Campylobacter rectus RM3267] Length = 145 Score = 42.9 bits (99), Expect = 0.038, Method: Composition-based stats. Identities = 9/58 (15%), Positives = 20/58 (34%), Gaps = 6/58 (10%) Query: 1 MQTSFNIGLA------AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + A + R ++ N++N DT ++ + F + +I Sbjct: 1 MFAGIQTSKSKPLVESALASRNLRQQMISSNIANIDTPFYKARDIAFEAALSQTAQEI 58 >gi|152983100|ref|YP_001353453.1| flagellar basal-body rod protein FlgB [Janthinobacterium sp. Marseille] gi|151283177|gb|ABR91587.1| flagellar basal-body rod protein FlgB [Janthinobacterium sp. Marseille] Length = 141 Score = 42.9 bits (99), Expect = 0.038, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 19/42 (45%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS 57 +RL VA N++N DT ++ + F + D+ + Sbjct: 30 SKRLEVVASNIANADTPNYKARDIDFKTALNRALAAPDKIVP 71 >gi|313639043|gb|EFS04032.1| flagellar basal body rod protein FlgB [Listeria seeligeri FSL S4-171] Length = 133 Score = 42.9 bits (99), Expect = 0.039, Method: Composition-based stats. Identities = 10/104 (9%), Positives = 28/104 (26%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 L+ V++N++N +T F+ + F E +G+ Q + + Sbjct: 12 LNYLQTANQVVSNNIANANTSNFKASETSFEESLGSSLRPSGQNNETTTGSLTKTNSKHL 71 Query: 72 SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115 + + + + + + Sbjct: 72 TGTEIDQINAKVTTKGGSINEDGNNVNVTSEMISLTKNNQMYAL 115 >gi|229160708|ref|ZP_04288700.1| Flagellar basal-body rod protein FlgC [Bacillus cereus R309803] gi|228622723|gb|EEK79557.1| Flagellar basal-body rod protein FlgC [Bacillus cereus R309803] Length = 137 Score = 42.9 bits (99), Expect = 0.039, Method: Composition-based stats. Identities = 7/40 (17%), Positives = 22/40 (55%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 G++ N + EM ++ + + + T++++ N+K + + Sbjct: 91 GYVRYPNIDVTAEMTNVMIAQKMYEANTSVLNANKKMLDK 130 Score = 41.8 bits (96), Expect = 0.082, Method: Composition-based stats. Identities = 5/33 (15%), Positives = 13/33 (39%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG 33 M + N + + + ++N+ N +T Sbjct: 1 MFQAINASGSGLTTARKWMEVTSNNIVNANTTA 33 >gi|224825161|ref|ZP_03698267.1| flagellar basal-body rod protein FlgB [Lutiella nitroferrum 2002] gi|224602832|gb|EEG09009.1| flagellar basal-body rod protein FlgB [Lutiella nitroferrum 2002] Length = 136 Score = 42.9 bits (99), Expect = 0.039, Method: Composition-based stats. Identities = 9/54 (16%), Positives = 22/54 (40%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 A +R +A N++N DT ++ + + F+ + + + + V Sbjct: 15 ALNLRAKRAEVIASNIANADTPNYKAVDLDFASALQSAQGTQSRLALNVTDPAH 68 >gi|209549487|ref|YP_002281404.1| hypothetical protein Rleg2_1893 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209535243|gb|ACI55178.1| protein of unknown function DUF1078 domain protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 101 Score = 42.9 bits (99), Expect = 0.039, Method: Composition-based stats. Identities = 10/39 (25%), Positives = 20/39 (51%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44 N L+ A R+ +A+N++N+ T G+ + + V Sbjct: 8 NTALSGMRAQTPRIGAIANNVANSSTSGYARLNTSLTSV 46 >gi|121596114|ref|YP_988010.1| flagellar basal-body rod protein FlgB [Acidovorax sp. JS42] gi|120608194|gb|ABM43934.1| flagellar basal-body rod protein FlgB [Acidovorax sp. JS42] Length = 151 Score = 42.9 bits (99), Expect = 0.039, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 29/71 (40%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69 +A L +R +A N++N DT G+ KF++ + A+ S + Sbjct: 27 SALLLRSERQRAIASNIANADTPGYVARDFKFADAMRAVNEAQAPSPLRSQSVSDPRHIP 86 Query: 70 VGSFISTGTEL 80 + + S ++ Sbjct: 87 LPAAASGSSDS 97 >gi|78357998|ref|YP_389447.1| flagellar basal-body rod protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78220403|gb|ABB39752.1| flagellar basal-body rod protein, putative [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 125 Score = 42.9 bits (99), Expect = 0.039, Method: Composition-based stats. Identities = 5/40 (12%), Positives = 15/40 (37%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 S+ + + E M+ + + + I ++ I + Sbjct: 85 SDTDLVRESVTMMENQRAYEANAAAIRAQDEMTGTFIDEM 124 Score = 38.7 bits (88), Expect = 0.69, Method: Composition-based stats. Identities = 12/33 (36%), Positives = 17/33 (51%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 A A R + ADN++N T GFR+ +V Sbjct: 9 ALNAFSMRQAVTADNIANASTDGFRSREVVLET 41 >gi|50120636|ref|YP_049803.1| flagellar basal body rod protein FlgB [Pectobacterium atrosepticum SCRI1043] gi|49611162|emb|CAG74608.1| flagellar basal-body rod protein [Pectobacterium atrosepticum SCRI1043] Length = 138 Score = 42.9 bits (99), Expect = 0.039, Method: Composition-based stats. Identities = 11/65 (16%), Positives = 22/65 (33%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR +A N++N DT G++ + F+ + + +A + Sbjct: 15 ALNLRAQRQEILAANIANADTPGYQARDIDFASQLSKTMEQGRVNGTGIALKTTSVRHIP 74 Query: 71 GSFIS 75 Sbjct: 75 AQSFQ 79 >gi|117928046|ref|YP_872597.1| flagellar basal-body rod protein [Acidothermus cellulolyticus 11B] gi|117648509|gb|ABK52611.1| flagellar basal-body rod protein [Acidothermus cellulolyticus 11B] Length = 125 Score = 42.9 bits (99), Expect = 0.039, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 27/72 (37%), Gaps = 3/72 (4%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 + + +A A ++ L ADN++N DT F +V F + + A D + + + Sbjct: 19 QALEVSIAGLSARQRAL---ADNVANIDTPNFLAKRVVFEDSLKAAIASGDPGAAQITTL 75 Query: 63 KEYLSKEVGSFI 74 Sbjct: 76 TSLEPTNTNGNN 87 >gi|302387782|ref|YP_003823604.1| flagellar basal-body rod protein FlgC [Clostridium saccharolyticum WM1] gi|302198410|gb|ADL05981.1| flagellar basal-body rod protein FlgC [Clostridium saccharolyticum WM1] Length = 148 Score = 42.9 bits (99), Expect = 0.040, Method: Composition-based stats. Identities = 11/31 (35%), Positives = 17/31 (54%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32 +S NI +A A RL ++N++N DT Sbjct: 4 LSSMNISASAMTAQRLRLDIASENIANIDTT 34 Score = 42.2 bits (97), Expect = 0.062, Method: Composition-based stats. Identities = 6/42 (14%), Positives = 19/42 (45%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G+++ N + + E + T+ + + T + + +A+ Sbjct: 103 GYVQMPNVDLIKETVDSMSATRSYEANITAFNAIKFMASKAL 144 >gi|289548869|ref|YP_003473857.1| flagellar hook-associated protein FlgK [Thermocrinis albus DSM 14484] gi|289182486|gb|ADC89730.1| flagellar hook-associated protein FlgK [Thermocrinis albus DSM 14484] Length = 516 Score = 42.9 bits (99), Expect = 0.040, Method: Composition-based stats. Identities = 16/194 (8%), Positives = 49/194 (25%), Gaps = 6/194 (3%) Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVT 109 + S + + ++ G ++ P G R Sbjct: 323 GESGSITLVGVSSVTVSYQPSDTLQDIANIINAQNAGFTASVVQEPDGTYTLR--IVSSD 380 Query: 110 DDGSLVSASGKYP----VLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 + ++G PQ + + + + + D+ Sbjct: 381 PSYQITDSNGNIGVKVFTGTGLQDGGVNPQLPSLMGNLDYSVADRFFSLSSRWWEDLKDL 440 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225 Q V +S + +E ++ E + E +++ L + + ++ Sbjct: 441 YQKLVSDISSTQNTLKKQHEIEKALLDSLNARLSELQGVSIDQEFMEIMQLQRSYEALAK 500 Query: 226 LIDENEKSMLEAIR 239 + + + + Sbjct: 501 TVSAMDDLLRTTLN 514 >gi|298345988|ref|YP_003718675.1| flagellar basal body rod protein [Mobiluncus curtisii ATCC 43063] gi|304390254|ref|ZP_07372208.1| flagellar basal-body rod protein FlgC [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315654575|ref|ZP_07907481.1| flagellar basal-body rod protein FlgC [Mobiluncus curtisii ATCC 51333] gi|315657519|ref|ZP_07910401.1| flagellar basal-body rod protein FlgC [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|298236049|gb|ADI67181.1| flagellar basal body rod protein [Mobiluncus curtisii ATCC 43063] gi|304326736|gb|EFL93980.1| flagellar basal-body rod protein FlgC [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315491039|gb|EFU80658.1| flagellar basal-body rod protein FlgC [Mobiluncus curtisii ATCC 51333] gi|315491991|gb|EFU81600.1| flagellar basal-body rod protein FlgC [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 132 Score = 42.9 bits (99), Expect = 0.040, Method: Composition-based stats. Identities = 12/111 (10%), Positives = 25/111 (22%), Gaps = 8/111 (7%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDI--DQK 55 + I + L ++DN++N +T FR V V Sbjct: 6 AIGIAGTGMTVNRKWLDCISDNIANINTTKPMNEEAFRARYVVAQAVDYGRPAGTMVSGI 65 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106 G+ + G ++ + + Sbjct: 66 ALGGTDGRIVYDPRDPNANEEGYVRHPDIDLGSQMTQLIMAQRAYQANAAV 116 Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 14/133 (10%), Positives = 32/133 (24%), Gaps = 6/133 (4%) Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 G + E G + M Sbjct: 3 TFGAIGIAGTGMTVNRKWLDCISDNIANINTTKPMNEEAFRARYVVAQAVDYGRPAGTMV 62 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 G G P P + G++ + + +M Q+I + + + + Sbjct: 63 SGIALGGTDGRIVYDPRDPNANEE------GYVRHPDIDLGSQMTQLIMAQRAYQANAAV 116 Query: 227 IDENEKSMLEAIR 239 +D + + A++ Sbjct: 117 VDRAKSTYEAALQ 129 >gi|153951647|ref|YP_001398768.1| flagellar hook-associated protein FlgK [Campylobacter jejuni subsp. doylei 269.97] gi|152939093|gb|ABS43834.1| putative flagellar hook-associated protein FlgK [Campylobacter jejuni subsp. doylei 269.97] Length = 608 Score = 42.9 bits (99), Expect = 0.040, Method: Composition-based stats. Identities = 8/36 (22%), Positives = 17/36 (47%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 G+ A E +++T +N+SN + + +V Sbjct: 7 LYTGVTGLKASEVQIATTGNNISNANATFYTRQRVV 42 Score = 41.8 bits (96), Expect = 0.084, Method: Composition-based stats. Identities = 5/48 (10%), Positives = 18/48 (37%) Query: 191 GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 +V + S N+ E+ +I + + ++ ++ + + Sbjct: 557 YNSVYSEYQSKSGVNTNEELVALIQYQSSYGAAAKIVSTVDQMLDTLL 604 >gi|90021849|ref|YP_527676.1| hypothetical protein Sde_2204 [Saccharophagus degradans 2-40] gi|89951449|gb|ABD81464.1| Flagellar hook-associated protein [Saccharophagus degradans 2-40] Length = 920 Score = 42.9 bits (99), Expect = 0.040, Method: Composition-based stats. Identities = 10/48 (20%), Positives = 17/48 (35%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 I + A + LST N+SN + G+ +V + Sbjct: 6 LGISVTGLRASQSALSTTGHNISNANVDGYSRQRVIAETNPATRADGG 53 Score = 36.0 bits (81), Expect = 4.5, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 48/168 (28%), Gaps = 6/168 (3%) Query: 76 TGTELDFALEGDAWFALESPRGIIL---TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQ 132 +G + D A+ P+ +L T + K G V+ SGK D ++ Sbjct: 753 SGGKFDIAMADGVSLTTFPPQSRLLGDTTAEDFAKNRYMGIQVNLSGKPQAGDSFTLDFN 812 Query: 133 IPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTP-LEDLSG 191 I + + I V S R S I + L Sbjct: 813 IDGAMDNRSALALVAIQSSNLVQGKSASLSESYGSLIERVGIDTSSSRINMEASKQVLEH 872 Query: 192 VTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 T R + S N E +I Q +++ +I I Sbjct: 873 TTAMRNSI--SAVNLDEEAANLIRFEQMYSANAQVISVARNLFDTLIN 918 >gi|78355402|ref|YP_386851.1| flagellar basal-body rod protein FlgC [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78217807|gb|ABB37156.1| flagellar basal-body rod protein FlgC [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 146 Score = 42.9 bits (99), Expect = 0.040, Method: Composition-based stats. Identities = 6/42 (14%), Positives = 21/42 (50%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G+++ + N + EM ++ + + + + I+ + +A+ Sbjct: 100 GYVKYPDINVVEEMANLMTSQRGYQASVSTIEAVKSMYTKAL 141 Score = 37.2 bits (84), Expect = 2.2, Method: Composition-based stats. Identities = 8/31 (25%), Positives = 16/31 (51%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32 T+ +IG +A A ++ + N++N T Sbjct: 4 MTALDIGASALSAERTSMNITSMNLANAKTT 34 >gi|289433988|ref|YP_003463860.1| flagellar basal-body rod protein FlgB [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170232|emb|CBH26772.1| flagellar basal-body rod protein FlgB [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 133 Score = 42.9 bits (99), Expect = 0.040, Method: Composition-based stats. Identities = 10/104 (9%), Positives = 28/104 (26%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 L+ V++N++N +T F+ + F E +G+ Q + + Sbjct: 12 LNYLQTANQVVSNNIANANTSNFKASETSFEESLGSSLRPSGQNNETTTGSLTKTNSKHL 71 Query: 72 SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115 + + + + + + Sbjct: 72 TGTEIDQTNAKVTTKGGSINEDGNNVNVTSEMISLTKNNQMYAL 115 >gi|146278770|ref|YP_001168929.1| flagellar hook-associated protein FlgK [Rhodobacter sphaeroides ATCC 17025] gi|145557011|gb|ABP71624.1| flagellar hook-associated protein FlgK [Rhodobacter sphaeroides ATCC 17025] Length = 476 Score = 42.9 bits (99), Expect = 0.040, Method: Composition-based stats. Identities = 13/77 (16%), Positives = 26/77 (33%), Gaps = 3/77 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + + L+ + + T A+N++N T GF ++ EV + + V + Sbjct: 6 ALSSALSGLTVTSRGVETAANNIANALTEGFARREL---EVSARAYGGEGRGVRVVGVNR 62 Query: 64 EYLSKEVGSFISTGTEL 80 VG Sbjct: 63 IIDMTLVGDRRLADAAT 79 >gi|294084420|ref|YP_003551178.1| flagellar basal-body rod protein FlgC [Candidatus Puniceispirillum marinum IMCC1322] gi|292663993|gb|ADE39094.1| flagellar basal-body rod protein FlgC [Candidatus Puniceispirillum marinum IMCC1322] Length = 138 Score = 42.9 bits (99), Expect = 0.041, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 19/43 (44%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 GF+ + N E +M+ ++++ + ++ M+ I Sbjct: 93 GFVYSAAVNVEEEFVEMLEASRQYQNNIEVVTTLRALMMRTIN 135 Score = 35.6 bits (80), Expect = 5.9, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 32/86 (37%), Gaps = 6/86 (6%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKI 56 F+I A A RL+T+A N++N + +R++K F ND Sbjct: 6 NVFDISGRAMAAQMVRLNTIASNLANAGNLASSEDEAYRSMKPVFETRFADNVNDSGMST 65 Query: 57 SFVASGKEYLSKEVGSFISTGTELDF 82 + V + K ++ + D Sbjct: 66 TQVVGVTKLSRKPERIYMPDHPKSDA 91 >gi|225375314|ref|ZP_03752535.1| hypothetical protein ROSEINA2194_00939 [Roseburia inulinivorans DSM 16841] gi|225212803|gb|EEG95157.1| hypothetical protein ROSEINA2194_00939 [Roseburia inulinivorans DSM 16841] Length = 131 Score = 42.9 bits (99), Expect = 0.041, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 21/40 (52%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50 A A R + + +N++NTDT G++ +V F V+ Sbjct: 16 AADASWLRETAIMNNLANTDTPGYKRQEVDFESVLQRELG 55 >gi|331007440|ref|ZP_08330617.1| Flagellar hook-associated protein flgK [gamma proteobacterium IMCC1989] gi|330418747|gb|EGG93236.1| Flagellar hook-associated protein flgK [gamma proteobacterium IMCC1989] Length = 1062 Score = 42.9 bits (99), Expect = 0.041, Method: Composition-based stats. Identities = 8/46 (17%), Positives = 18/46 (39%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50 + ++ + L TV N++N +T G+ + + G Sbjct: 6 LGVSISGLRVSQNALRTVGHNIANANTAGYTRQSTDINSMGGTQTG 51 >gi|311280011|ref|YP_003942242.1| flagellar hook-associated protein FlgK [Enterobacter cloacae SCF1] gi|308749206|gb|ADO48958.1| flagellar hook-associated protein FlgK [Enterobacter cloacae SCF1] Length = 547 Score = 42.9 bits (99), Expect = 0.041, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 23/52 (44%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+TV++N+++ + G+ ++ + Sbjct: 1 MSSLINSAMSGLGAAQAALNTVSNNIASYNVSGYTRQTTVLAQSNSTLGPGG 52 >gi|291334310|gb|ADD93971.1| predicted flagellar proximal rod protein [uncultured marine bacterium MedDCM-OCT-S09-C247] Length = 138 Score = 42.9 bits (99), Expect = 0.041, Method: Composition-based stats. Identities = 6/43 (13%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ + N+ E+ +M+ ++++ + ++ M+ I Sbjct: 93 GYIYMAAVNTEEELVEMLEASRQYENNVEVVSTLRGLMMRTIS 135 Score = 41.4 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 28/85 (32%), Gaps = 6/85 (7%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKI 56 F++ A RL+TVA N++N +V +R IK FS + Sbjct: 6 NIFDVAARGMSAQMVRLNTVASNLANARSVASSEAEAYRAIKPVFSTLYADDLERSGVSS 65 Query: 57 SFVASGKEYLSKEVGSFISTGTELD 81 V + + + D Sbjct: 66 VDVVDIVAVDREPEKVYQPGHPKAD 90 >gi|225619784|ref|YP_002721041.1| flagellar basal body rod protein FlgB [Brachyspira hyodysenteriae WA1] gi|225214603|gb|ACN83337.1| flagellar basal body rod protein FlgB [Brachyspira hyodysenteriae WA1] Length = 142 Score = 42.9 bits (99), Expect = 0.041, Method: Composition-based stats. Identities = 9/64 (14%), Positives = 16/64 (25%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 R +ADN++N T F+ V F + + + Sbjct: 20 LNVYGLRAEVIADNIANVSTPNFKRSDVTFEYQLARALDSENYNGMEAKRTDSRHFPFHM 79 Query: 72 SFIS 75 Sbjct: 80 PMDY 83 >gi|239826610|ref|YP_002949234.1| flagellar basal body rod protein FlgB [Geobacillus sp. WCH70] gi|239806903|gb|ACS23968.1| flagellar basal-body rod protein FlgB [Geobacillus sp. WCH70] Length = 130 Score = 42.9 bits (99), Expect = 0.041, Method: Composition-based stats. Identities = 9/60 (15%), Positives = 21/60 (35%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 R +A+N++N DT ++ +V+F + ++ K + Sbjct: 14 GLDYASLREKVIANNIANVDTPNYKAKEVRFRAELDRALQPLEAKRTNPKHLPFTRPMTN 73 >gi|242277990|ref|YP_002990119.1| flagellar hook-associated protein FlgK [Desulfovibrio salexigens DSM 2638] gi|242120884|gb|ACS78580.1| flagellar hook-associated protein FlgK [Desulfovibrio salexigens DSM 2638] Length = 694 Score = 42.9 bits (99), Expect = 0.042, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 1/47 (2%) Query: 1 MQ-TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46 M F+IG A + LS +N++N T G+R V E + Sbjct: 1 MLGNIFSIGRGAMQNAQIGLSVHGNNVANLKTPGYRRRTVIQDESMS 47 >gi|299534790|ref|ZP_07048120.1| flagellar basal body rod protein FlgB [Lysinibacillus fusiformis ZC1] gi|298729878|gb|EFI70423.1| flagellar basal body rod protein FlgB [Lysinibacillus fusiformis ZC1] Length = 130 Score = 42.9 bits (99), Expect = 0.042, Method: Composition-based stats. Identities = 11/78 (14%), Positives = 29/78 (37%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69 T+A+N++N DT ++ V F +++ K+ ++ ++ Sbjct: 13 NGLSYATLNHKTIANNIANVDTPNYKAKNVSFKDMLEEQKSIAISAYRTDNRHYDFTFRQ 72 Query: 70 VGSFISTGTELDFALEGD 87 ++ L + G+ Sbjct: 73 ATPGVNIVENLRYRNNGN 90 >gi|152990394|ref|YP_001356116.1| flagellar hook-associated protein 1 FliK [Nitratiruptor sp. SB155-2] gi|151422255|dbj|BAF69759.1| flagellar hook-associated protein 1 FliK [Nitratiruptor sp. SB155-2] Length = 596 Score = 42.9 bits (99), Expect = 0.043, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 22/44 (50%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44 M + N L ++ + V +N++N +T G+ ++ FS + Sbjct: 11 MANALNNISQTLLQNQKAIDIVNNNIANLNTEGYSRVEAGFSSL 54 Score = 40.2 bits (92), Expect = 0.28, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 15/37 (40%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N E+ ++ L + + + ++ ++ I Sbjct: 556 SGVNLDEELVKLTQLQRSYQATARVMMVTDELFKTLI 592 >gi|302384099|ref|YP_003819922.1| flagellar basal-body rod protein FlgC [Brevundimonas subvibrioides ATCC 15264] gi|302194727|gb|ADL02299.1| flagellar basal-body rod protein FlgC [Brevundimonas subvibrioides ATCC 15264] Length = 144 Score = 42.5 bits (98), Expect = 0.044, Method: Composition-based stats. Identities = 8/49 (16%), Positives = 21/49 (42%), Gaps = 7/49 (14%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSE 43 ++ + +A A + R+ +A+N++N ++ +R F Sbjct: 14 NSAMAVAASALTAQQSRMRIIAENIANAESTARTAGGQPYRRQIPVFEA 62 Score = 40.2 bits (92), Expect = 0.22, Method: Composition-based stats. Identities = 6/42 (14%), Positives = 16/42 (38%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N +S+ E M + + + +I+ + Sbjct: 98 GYVLRPNVDSLIESMDMREAQRAYEANLNVIETARTMESRTL 139 >gi|229017032|ref|ZP_04173952.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH1273] gi|229023213|ref|ZP_04179724.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH1272] gi|228738138|gb|EEL88623.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH1272] gi|228744303|gb|EEL94385.1| Flagellar basal-body rod protein FlgC [Bacillus cereus AH1273] Length = 137 Score = 42.5 bits (98), Expect = 0.044, Method: Composition-based stats. Identities = 8/40 (20%), Positives = 22/40 (55%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 G++ N N EM ++ + + + T++++ N+K + + Sbjct: 91 GYVRYPNINVTAEMTNVMVAQKMYEANTSVLNANKKMLDK 130 Score = 42.2 bits (97), Expect = 0.057, Method: Composition-based stats. Identities = 7/33 (21%), Positives = 15/33 (45%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG 33 M + N +A + + ++N+ N +T G Sbjct: 1 MFQAINASGSALTTARKWMEVTSNNIVNANTTG 33 >gi|315301962|ref|ZP_07872958.1| flagellar basal-body rod protein FlgB [Listeria ivanovii FSL F6-596] gi|313629669|gb|EFR97806.1| flagellar basal-body rod protein FlgB [Listeria ivanovii FSL F6-596] Length = 133 Score = 42.5 bits (98), Expect = 0.044, Method: Composition-based stats. Identities = 10/104 (9%), Positives = 28/104 (26%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 L+ V++N++N +T F+ + F E +G+ Q + + Sbjct: 12 LNYLQTANQVVSNNIANANTSNFKASETSFEESLGSSLRPSGQNNEATTGSLTKTNSKHL 71 Query: 72 SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115 + + + + + + Sbjct: 72 AGTEIDQTNAKVTTKGGSINEDGNNVNVTSEMISLTKNNQMYAL 115 >gi|169827117|ref|YP_001697275.1| flagellar basal body rod protein FlgB [Lysinibacillus sphaericus C3-41] gi|168991605|gb|ACA39145.1| Flagellar basal-body rod protein [Lysinibacillus sphaericus C3-41] Length = 130 Score = 42.5 bits (98), Expect = 0.044, Method: Composition-based stats. Identities = 12/78 (15%), Positives = 28/78 (35%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69 T+A+N++N DT ++ V F E++ K ++ ++ Sbjct: 13 NGLSYATLNHKTIANNIANVDTPNYKAKNVSFKEMLAEQKGIAISAYRTDNRHYDFTIRQ 72 Query: 70 VGSFISTGTELDFALEGD 87 ++ L + G+ Sbjct: 73 STPGVNNIENLRYRNNGN 90 >gi|283782090|ref|YP_003372845.1| flagellar basal-body rod protein FlgC [Pirellula staleyi DSM 6068] gi|283440543|gb|ADB18985.1| flagellar basal-body rod protein FlgC [Pirellula staleyi DSM 6068] Length = 141 Score = 42.5 bits (98), Expect = 0.044, Method: Composition-based stats. Identities = 10/29 (34%), Positives = 18/29 (62%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNT 29 M T+ +I +A +A RL T++ N++N Sbjct: 1 MHTALDISTSALVAQRIRLDTISSNLANM 29 Score = 40.2 bits (92), Expect = 0.23, Method: Composition-based stats. Identities = 5/48 (10%), Positives = 20/48 (41%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 ++G++ N E + T+ + + +++ + + +R + Sbjct: 94 RKGYVAYPRINQTAEFVDALVATRAYEANVGVMEITKNMSQQTLRILG 141 >gi|225569965|ref|ZP_03778990.1| hypothetical protein CLOHYLEM_06060 [Clostridium hylemonae DSM 15053] gi|225161435|gb|EEG74054.1| hypothetical protein CLOHYLEM_06060 [Clostridium hylemonae DSM 15053] Length = 134 Score = 42.5 bits (98), Expect = 0.044, Method: Composition-based stats. Identities = 6/41 (14%), Positives = 17/41 (41%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 G++ N + + E + T+ + + T + + +A Sbjct: 89 GYVRMPNVDMIKETTDAMAATRSYEANITAFNAVKLMAQKA 129 >gi|319944129|ref|ZP_08018407.1| flagellar hook-associated protein [Lautropia mirabilis ATCC 51599] gi|319742623|gb|EFV95032.1| flagellar hook-associated protein [Lautropia mirabilis ATCC 51599] Length = 628 Score = 42.5 bits (98), Expect = 0.045, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 26/83 (31%), Gaps = 1/83 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M IG +A A +L T N++N T G+ +V+ + G + V Sbjct: 1 MAGLIQIGQSALAAAYTQLQTGGHNIANVHTPGYVRQEVQLATAGGQYHGH-GYIGNGVE 59 Query: 61 SGKEYLSKEVGSFISTGTELDFA 83 + + A Sbjct: 60 VQDVRRAYDRFMADEVTRSTSLA 82 Score = 41.0 bits (94), Expect = 0.14, Method: Composition-based stats. Identities = 17/133 (12%), Positives = 42/133 (31%), Gaps = 3/133 (2%) Query: 106 FKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDM 165 F V +G ++ SG+ + D+ + + + + N E ++ + V + Sbjct: 495 FNVEANGWTLTLSGRPAMGDVLEMKKRSAPRQDNANAREMTLLADRHNVDGATFSQAFAS 554 Query: 166 SQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITT 225 V + + TV S N E +++ Q + + Sbjct: 555 LLSDVGSRALQAKTSEKASAKMLEGAKTVLAN---RSGVNLDEEAARLLQYRQAYQAAAK 611 Query: 226 LIDENEKSMLEAI 238 +I ++ + Sbjct: 612 VIQTADEMFNSIL 624 >gi|90411002|ref|ZP_01219016.1| flagellar basal body protein [Photobacterium profundum 3TCK] gi|90328215|gb|EAS44526.1| flagellar basal body protein [Photobacterium profundum 3TCK] Length = 131 Score = 42.5 bits (98), Expect = 0.045, Method: Composition-based stats. Identities = 9/37 (24%), Positives = 20/37 (54%) Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 +R T+A N++N +T G++ + F + A + + Sbjct: 21 KRAETLASNIANANTPGYKAKDMDFDRALKAATSGAN 57 >gi|222112269|ref|YP_002554533.1| flagellar basal-body rod protein flgb [Acidovorax ebreus TPSY] gi|221731713|gb|ACM34533.1| flagellar basal-body rod protein FlgB [Acidovorax ebreus TPSY] Length = 138 Score = 42.5 bits (98), Expect = 0.045, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 30/71 (42%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69 +A L +R +A N++N DT G+ KF++ + A+ + S + Sbjct: 14 SALLLRSERQRAIASNIANADTPGYVARDFKFADAMRAVNEAHNPSPLRSQSVSDPRHIP 73 Query: 70 VGSFISTGTEL 80 + + S ++ Sbjct: 74 LPAAASGSSDS 84 >gi|213417746|ref|ZP_03350864.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 88 Score = 42.5 bits (98), Expect = 0.045, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 26/66 (39%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR +A N++N DT G++ + F+ + + ++ VA Sbjct: 15 ALNLRAQRQEILAANIANADTPGYQARDIDFASELKKVMVRGREETGGVALSLTSSRHIP 74 Query: 71 GSFIST 76 +S+ Sbjct: 75 AQAVSS 80 >gi|319649570|ref|ZP_08003726.1| flagellar basal-body rod protein B [Bacillus sp. 2_A_57_CT2] gi|317398732|gb|EFV79414.1| flagellar basal-body rod protein B [Bacillus sp. 2_A_57_CT2] Length = 131 Score = 42.5 bits (98), Expect = 0.045, Method: Composition-based stats. Identities = 7/92 (7%), Positives = 24/92 (26%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIS 75 + ++ N++N DT ++ F E + + ++ + + Sbjct: 19 SLKQKVISQNIANADTPNYKAKDASFKEAFQSALEGSMEANKSDIRHYDFKNGLSSAQGV 78 Query: 76 TGTELDFALEGDAWFALESPRGIILTRDGRFK 107 ++ + T + Sbjct: 79 ITKRNASYNHNGNSVDVDKEMAELATNQIYYN 110 >gi|302878273|ref|YP_003846837.1| flagellar basal-body rod protein FlgB [Gallionella capsiferriformans ES-2] gi|302581062|gb|ADL55073.1| flagellar basal-body rod protein FlgB [Gallionella capsiferriformans ES-2] Length = 134 Score = 42.5 bits (98), Expect = 0.046, Method: Composition-based stats. Identities = 12/64 (18%), Positives = 23/64 (35%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 S + A R +A N++N DT G++ + F+ + K+ S Sbjct: 6 DESLHFNQTALSLRGARQELLASNIANADTPGYKARDINFASALQNALAGTSVKLPMATS 65 Query: 62 GKEY 65 + Sbjct: 66 SAMH 69 >gi|220905030|ref|YP_002480342.1| hypothetical protein Ddes_1767 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869329|gb|ACL49664.1| protein of unknown function DUF1078 domain protein [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 133 Score = 42.5 bits (98), Expect = 0.046, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 21/53 (39%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54 TS +G +A ++ A N++N T GF + ++ +D Sbjct: 5 NTSMQLGASAMNTHSWGMAVSAHNVANVSTPGFEPQRAVYATGPAGQGVRLDA 57 Score = 42.5 bits (98), Expect = 0.049, Method: Composition-based stats. Identities = 7/37 (18%), Positives = 13/37 (35%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N EM MI + + T + + + + Sbjct: 93 SGTNLAREMVSMISTQHAYKANATTVRTADAMLGTLL 129 >gi|203287754|ref|YP_002222769.1| flagellar basal-body rod protein [Borrelia recurrentis A1] gi|201084974|gb|ACH94548.1| flagellar basal-body rod protein [Borrelia recurrentis A1] Length = 135 Score = 42.5 bits (98), Expect = 0.046, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 16/26 (61%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSE 43 R S VADN++N DT F+ KV F Sbjct: 21 RQSVVADNIANVDTPNFKRSKVTFEA 46 >gi|167770222|ref|ZP_02442275.1| hypothetical protein ANACOL_01565 [Anaerotruncus colihominis DSM 17241] gi|167667544|gb|EDS11674.1| hypothetical protein ANACOL_01565 [Anaerotruncus colihominis DSM 17241] Length = 145 Score = 42.5 bits (98), Expect = 0.046, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 6/48 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43 S +I +A A R+ T+ N++N++T G +R +V F E Sbjct: 4 MKSMDIVGSALTAERFRMDTILQNIANSNTTRTPEGEPYRRKQVVFQE 51 Score = 37.2 bits (84), Expect = 2.0, Method: Composition-based stats. Identities = 8/46 (17%), Positives = 20/46 (43%), Gaps = 1/46 (2%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G++ N N E ++ + +++ T + + L+A+ I Sbjct: 99 GYVMYPNVNLTEERVDLMAASNAYDANLTALAVVKSLALKAL-EIG 143 >gi|89092133|ref|ZP_01165088.1| Flagellar basal-body rod protein FlgB [Oceanospirillum sp. MED92] gi|89083868|gb|EAR63085.1| Flagellar basal-body rod protein FlgB [Oceanospirillum sp. MED92] Length = 131 Score = 42.5 bits (98), Expect = 0.046, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 4/49 (8%) Query: 1 MQTSFNIGLA----AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV 45 M SF+ L A L +R +A+N++N DT F+ ++F+ + Sbjct: 1 MAISFDAALGIHDDALLHRARRAEVLANNIANADTPNFKARDMEFAHAL 49 >gi|313634360|gb|EFS00957.1| flagellar basal-body rod protein FlgB [Listeria seeligeri FSL N1-067] Length = 133 Score = 42.5 bits (98), Expect = 0.047, Method: Composition-based stats. Identities = 10/104 (9%), Positives = 28/104 (26%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 L+ V++N++N +T F+ + F E +G+ Q + + Sbjct: 12 LNYLQTANQVVSNNIANANTSNFKASETSFEESLGSSLRPSGQNNETTTGSLTKTNSKHL 71 Query: 72 SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115 + + + + + + Sbjct: 72 TGTEIDQTNAKVTNKGGSINEDGNNVNVTSEMISLTKNNQMYAL 115 >gi|157961168|ref|YP_001501202.1| flagellar basal body rod protein FlgB [Shewanella pealeana ATCC 700345] gi|157846168|gb|ABV86667.1| flagellar basal-body rod protein FlgB [Shewanella pealeana ATCC 700345] Length = 132 Score = 42.5 bits (98), Expect = 0.047, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 25/59 (42%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFI 74 QR ++ N++N DT G++ V FS+ + A ++ + K + + Sbjct: 20 SQRAEILSSNIANADTPGYKARDVDFSKAMNAAQSQQTGLAMAKSDSKHFDMAALTQQH 78 >gi|85859203|ref|YP_461405.1| flagellar hook-associated protein 1 [Syntrophus aciditrophicus SB] gi|85722294|gb|ABC77237.1| flagellar hook-associated protein 1 [Syntrophus aciditrophicus SB] Length = 463 Score = 42.5 bits (98), Expect = 0.047, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 16/34 (47%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44 A + + + N+SN +T G+ + FS V Sbjct: 14 ALSSFQAAIDITGSNISNVNTPGYSRQRPVFSSV 47 >gi|109947182|ref|YP_664410.1| flagellar hook-associated protein FlgK [Helicobacter acinonychis str. Sheeba] gi|109714403|emb|CAJ99411.1| flgK [Helicobacter acinonychis str. Sheeba] Length = 606 Score = 42.5 bits (98), Expect = 0.047, Method: Composition-based stats. Identities = 23/213 (10%), Positives = 58/213 (27%), Gaps = 16/213 (7%) Query: 28 NTDTVGFRTIKVK--FSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALE 85 N +T + + F + A N+ +K T AL+ Sbjct: 404 NANTDDNKDNNAENDFDDYFTASFNNETKKFIIQPKNASQGLFVSMKDNGTNFMG--ALK 461 Query: 86 GDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEK 145 + +F + I L ++ + + T + + + Sbjct: 462 LNPFFQGDDASTISLNKEYKKEPTTIR------------PWLAPINGNFDVANMMQQLQY 509 Query: 146 GEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNAN 205 + + + Q + N+ + + T+K+ L S + Sbjct: 510 DSVDFYNDKFDIKQMKISEFYQFLTSKINTDAEKSGRILDTKKSMLETIKKEQLSISQVS 569 Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 EM +I + + +I ++ + + Sbjct: 570 VDEEMVNLIKFQSGYAANAKVITAIDRMIDTLL 602 Score = 38.7 bits (88), Expect = 0.68, Method: Composition-based stats. Identities = 6/29 (20%), Positives = 11/29 (37%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTD 30 +S N A + + +N+SN Sbjct: 5 LSSLNTSYTGLQAHQSMVDVTGNNISNAS 33 >gi|170743259|ref|YP_001771914.1| flagellar basal body rod protein FlgB [Methylobacterium sp. 4-46] gi|168197533|gb|ACA19480.1| flagellar basal body rod protein [Methylobacterium sp. 4-46] Length = 133 Score = 42.5 bits (98), Expect = 0.048, Method: Composition-based stats. Identities = 7/29 (24%), Positives = 14/29 (48%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIK 38 + R +A+N++N +T GF+ Sbjct: 14 NRMQWHQTRQKVLAENVANANTPGFKARD 42 >gi|203284215|ref|YP_002221955.1| flagellar basal-body rod protein [Borrelia duttonii Ly] gi|201083658|gb|ACH93249.1| flagellar basal-body rod protein [Borrelia duttonii Ly] Length = 135 Score = 42.5 bits (98), Expect = 0.048, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 16/26 (61%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSE 43 R S VADN++N DT F+ KV F Sbjct: 21 RQSVVADNIANVDTPNFKRSKVTFEA 46 >gi|54308103|ref|YP_129123.1| flagellar hook-associated protein FlgK [Photobacterium profundum SS9] gi|46912529|emb|CAG19321.1| hypothetical flagellar hook-associated protein FlgM [Photobacterium profundum SS9] Length = 626 Score = 42.5 bits (98), Expect = 0.048, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 33/94 (35%), Gaps = 2/94 (2%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS--EVVGAIKNDIDQKISFVASG 62 N+G L +++L+T + N++N +T G+ V + + + + Sbjct: 6 LNMGSQGLLTAQRQLNTTSHNINNVNTEGYSRQSVVQQTNDPIWWGGSQHGTGVHAAEVR 65 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESPR 96 + Y T T L +A E + Sbjct: 66 RGYDQFATNELNLTTTNLSYATEREGQLGRLDNM 99 Score = 36.0 bits (81), Expect = 4.5, Method: Composition-based stats. Identities = 13/131 (9%), Positives = 37/131 (28%), Gaps = 5/131 (3%) Query: 114 LVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS-----VDMSQG 168 V+ G L ++ + + G G + + + A + +D+ +G Sbjct: 494 EVNVGGTRFTLSSGAMGGDVFAVNLNAADGNNGNLIKMQDLQAQKIMNDGRSSVIDVYEG 553 Query: 169 FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228 + + + + E N E M+ Q + + + ++ Sbjct: 554 LNTEMGVQKASASRLKEVGLVEKDAAQSRVAEIGGVNMDEEAANMMKFQQAYMASSRIMS 613 Query: 229 ENEKSMLEAIR 239 + + Sbjct: 614 VANDTFDTLLN 624 >gi|220932528|ref|YP_002509436.1| flagellar basal-body rod protein FlgB [Halothermothrix orenii H 168] gi|219993838|gb|ACL70441.1| flagellar basal-body rod protein FlgB [Halothermothrix orenii H 168] Length = 131 Score = 42.5 bits (98), Expect = 0.048, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 19/41 (46%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51 +R +ADN++N DT ++ V F + +I + Sbjct: 11 GLDGASKRHRALADNIANVDTPNYKRKDVDFVSTLKSIASQ 51 >gi|328948264|ref|YP_004365601.1| flagellar hook-associated protein FlgK [Treponema succinifaciens DSM 2489] gi|328448588|gb|AEB14304.1| flagellar hook-associated protein FlgK [Treponema succinifaciens DSM 2489] Length = 623 Score = 42.5 bits (98), Expect = 0.049, Method: Composition-based stats. Identities = 7/41 (17%), Positives = 14/41 (34%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E+ +I +N I ++ + I + Sbjct: 582 SGVNIDEELADIIKFQHGYNVAAKFISVQDELLDTLINRLG 622 Score = 37.5 bits (85), Expect = 1.7, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 20/52 (38%), Gaps = 3/52 (5%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDI 52 IG + +A ++ T N+SN DT G+ +V F + Sbjct: 7 GIEIGKRSLMAHSTQIQTAGHNISNADTEGYSRQRVIVKSFEPIYRPDLERA 58 >gi|114797235|ref|YP_759001.1| flagellar basal-body rod protein [Hyphomonas neptunium ATCC 15444] gi|114737409|gb|ABI75534.1| flagellar basal-body rod protein [Hyphomonas neptunium ATCC 15444] Length = 128 Score = 42.5 bits (98), Expect = 0.049, Method: Composition-based stats. Identities = 10/71 (14%), Positives = 24/71 (33%) Query: 8 GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLS 67 +A +R+ A+N+SN DT G++ + + + + + Sbjct: 11 AVAGMELQSRRMGVTAENISNADTPGYKRKLLMVEQSQLSSGEQFMASRVQLDEAEAKRD 70 Query: 68 KEVGSFISTGT 78 ++ G Sbjct: 71 YNPEHPMADGE 81 Score = 42.2 bits (97), Expect = 0.060, Method: Composition-based stats. Identities = 6/46 (13%), Positives = 16/46 (34%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G++ SN + + EM M + + + + + + Sbjct: 82 GYVTLSNVSIVTEMADMREANRSYEANLNSFQQARSMYRSLLDILR 127 >gi|90411011|ref|ZP_01219025.1| flagellar hook-associated protein [Photobacterium profundum 3TCK] gi|90328224|gb|EAS44535.1| flagellar hook-associated protein [Photobacterium profundum 3TCK] Length = 626 Score = 42.5 bits (98), Expect = 0.050, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 33/94 (35%), Gaps = 2/94 (2%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS--EVVGAIKNDIDQKISFVASG 62 N+G L +++L+T + N++N +T G+ V + + + + Sbjct: 6 LNMGSQGLLTAQRQLNTTSHNINNVNTEGYSRQSVVQQTNDPIWWGGSQHGTGVHAAEVR 65 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESPR 96 + Y T T L +A E + Sbjct: 66 RGYDQFATNELNLTTTNLSYATEREGQLGRLDNM 99 Score = 37.2 bits (84), Expect = 2.3, Method: Composition-based stats. Identities = 11/116 (9%), Positives = 33/116 (28%) Query: 124 LDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPP 183 + + + D K + Q K++ +D+ +G + Sbjct: 509 MGGDVFAVNLNASDGDNGNLIKMQDLQSQKIMNDGRSSVIDVYEGLNTEMGVQKASASRL 568 Query: 184 TPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + + + E + N E M+ Q + + + ++ + + Sbjct: 569 KEVGLVEKDAAQSRVAEIAGVNMDEEAANMMKFQQAYMASSRIMSVANDTFDTLLN 624 >gi|208435016|ref|YP_002266682.1| flagellar hook-associated protein 1 [Helicobacter pylori G27] gi|208432945|gb|ACI27816.1| flagellar hook-associated protein 1 [Helicobacter pylori G27] Length = 606 Score = 42.5 bits (98), Expect = 0.050, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 14/37 (37%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S + EM +I + + +I ++ + + Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLL 602 Score = 38.7 bits (88), Expect = 0.67, Method: Composition-based stats. Identities = 6/29 (20%), Positives = 11/29 (37%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTD 30 +S N A + + +N+SN Sbjct: 5 LSSLNTSYTGLQAHQSMVDVTGNNISNAS 33 >gi|317182372|dbj|BAJ60156.1| flagellar hook-associated protein FlgK [Helicobacter pylori F57] Length = 606 Score = 42.5 bits (98), Expect = 0.051, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 14/37 (37%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S + EM +I + + +I ++ + + Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLL 602 Score = 36.8 bits (83), Expect = 2.6, Method: Composition-based stats. Identities = 6/29 (20%), Positives = 11/29 (37%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTD 30 +S N A + + +N+SN Sbjct: 5 LSSLNASYTGLQAHQSMVDVTGNNISNAS 33 >gi|308183223|ref|YP_003927350.1| flagellar hook-associated protein FlgK [Helicobacter pylori PeCan4] gi|308065408|gb|ADO07300.1| flagellar hook-associated protein FlgK [Helicobacter pylori PeCan4] Length = 606 Score = 42.5 bits (98), Expect = 0.051, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 14/37 (37%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S + EM +I + + +I ++ + + Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLL 602 Score = 38.7 bits (88), Expect = 0.67, Method: Composition-based stats. Identities = 6/29 (20%), Positives = 11/29 (37%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTD 30 +S N A + + +N+SN Sbjct: 5 LSSLNTSYTGLQAHQSMVDVTGNNISNAS 33 >gi|261839850|gb|ACX99615.1| flagellar hook-associated protein FlgK [Helicobacter pylori 52] Length = 606 Score = 42.5 bits (98), Expect = 0.051, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 14/37 (37%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S + EM +I + + +I ++ + + Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLL 602 Score = 36.8 bits (83), Expect = 2.6, Method: Composition-based stats. Identities = 6/29 (20%), Positives = 11/29 (37%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTD 30 +S N A + + +N+SN Sbjct: 5 LSSLNASYTGLQAHQSMVDVTGNNISNAS 33 >gi|149195180|ref|ZP_01872271.1| flagellar basal-body rod protein B [Caminibacter mediatlanticus TB-2] gi|149134732|gb|EDM23217.1| flagellar basal-body rod protein B [Caminibacter mediatlanticus TB-2] Length = 142 Score = 42.5 bits (98), Expect = 0.051, Method: Composition-based stats. Identities = 13/81 (16%), Positives = 25/81 (30%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTG 77 R +A N++N DT +R ++F + + N K S + + Sbjct: 22 RQDMIASNIANADTPFYRPKDIRFEDALQEEINKKFNKPSKKLELAKTNPMHLEPKDIED 81 Query: 78 TELDFALEGDAWFALESPRGI 98 + D A + Sbjct: 82 SYKPIVFFRDGHLARNDGNSV 102 >gi|15645733|ref|NP_207910.1| flagellar hook-associated protein FlgK [Helicobacter pylori 26695] gi|2314271|gb|AAD08163.1| flagellar hook-associated protein 1 (HAP1) (flgK) [Helicobacter pylori 26695] Length = 606 Score = 42.5 bits (98), Expect = 0.051, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 14/37 (37%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S + EM +I + + +I ++ + + Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLL 602 Score = 38.7 bits (88), Expect = 0.68, Method: Composition-based stats. Identities = 6/29 (20%), Positives = 11/29 (37%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTD 30 +S N A + + +N+SN Sbjct: 5 LSSLNTSYTGLQAHQSMVDVTGNNISNAS 33 >gi|27904801|ref|NP_777927.1| flagellar basal-body rod protein Flgb [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|46395819|sp|Q89AI0|FLGB_BUCBP RecName: Full=Flagellar basal-body rod protein flgB gi|27904199|gb|AAO27032.1| flagellar basal-body rod protein Flgb [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 136 Score = 42.5 bits (98), Expect = 0.051, Method: Composition-based stats. Identities = 12/97 (12%), Positives = 34/97 (35%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 R +A N++N +T G ++ + FS+ G + ++ Q + Sbjct: 16 LNLHAYRQEILASNIANANTPGHKSSDINFSKTFGKLFSNALQGKKNNLTTTSNKHISNN 75 Query: 72 SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKV 108 + + ++ +++ + + I + R Sbjct: 76 DNVELSNYDEQTVKNNSYVSKNNAINIDVDRINFVHN 112 >gi|27380964|ref|NP_772493.1| hypothetical protein bll5853 [Bradyrhizobium japonicum USDA 110] gi|27354130|dbj|BAC51118.1| bll5853 [Bradyrhizobium japonicum USDA 110] Length = 627 Score = 42.5 bits (98), Expect = 0.051, Method: Composition-based stats. Identities = 12/73 (16%), Positives = 28/73 (38%) Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 Q F+ + + + + + T++ F S+ N EM +I L + + + Sbjct: 552 QQFLSIQGNAATQATQLQQGQSVVVSTLQAKFNSTSSVNLDSEMSNLIQLQNAYAANAHV 611 Query: 227 IDENEKSMLEAIR 239 + + M I+ Sbjct: 612 MSVVQSMMNTLIQ 624 Score = 41.4 bits (95), Expect = 0.10, Method: Composition-based stats. Identities = 8/32 (25%), Positives = 18/32 (56%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGF 34 ++ ++ A + LS V+ N++N+ T G+ Sbjct: 5 SALASAMSGLRANQAALSIVSSNVANSQTPGY 36 >gi|254779670|ref|YP_003057776.1| flagellar hook-associated protein FlgK [Helicobacter pylori B38] gi|254001582|emb|CAX29629.1| Flagellar hook-associated protein 1 (HAP 1) (FlgK) [Helicobacter pylori B38] Length = 606 Score = 42.5 bits (98), Expect = 0.052, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 14/37 (37%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S + EM +I + + +I ++ + + Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLL 602 Score = 38.7 bits (88), Expect = 0.68, Method: Composition-based stats. Identities = 6/29 (20%), Positives = 11/29 (37%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTD 30 +S N A + + +N+SN Sbjct: 5 LSSLNTSYTGLQAHQSMVDVTGNNISNAS 33 >gi|108563482|ref|YP_627798.1| flagellar hook-associated protein FlgK [Helicobacter pylori HPAG1] gi|107837255|gb|ABF85124.1| flagellar hook-associated protein 1 [Helicobacter pylori HPAG1] Length = 606 Score = 42.5 bits (98), Expect = 0.052, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 14/37 (37%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S + EM +I + + +I ++ + + Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLL 602 Score = 38.7 bits (88), Expect = 0.68, Method: Composition-based stats. Identities = 6/29 (20%), Positives = 11/29 (37%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTD 30 +S N A + + +N+SN Sbjct: 5 LSSLNTSYTGLQAHQSMVDVTGNNISNAS 33 >gi|94265700|ref|ZP_01289439.1| conserved hypothetical protein [delta proteobacterium MLMS-1] gi|93453786|gb|EAT04158.1| conserved hypothetical protein [delta proteobacterium MLMS-1] Length = 875 Score = 42.5 bits (98), Expect = 0.052, Method: Composition-based stats. Identities = 5/41 (12%), Positives = 17/41 (41%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S + EM +I + + +I +++ ++ + + Sbjct: 835 SGVSLDEEMANLIKFQHAYTAAARMISMSDEMLVTLLDTVR 875 Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 9/39 (23%), Positives = 16/39 (41%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 N+ A L + + N++N DT G+ K+ Sbjct: 8 LNLAKQALLTHQSSIQVAGHNVANVDTPGYTRQKINIEA 46 >gi|15639387|ref|NP_218836.1| flagellar basal-body rod protein (flgB) [Treponema pallidum subsp. pallidum str. Nichols] gi|189025629|ref|YP_001933401.1| flagellar basal-body rod protein [Treponema pallidum subsp. pallidum SS14] gi|3322679|gb|AAC65384.1| flagellar basal-body rod protein (flgB) [Treponema pallidum subsp. pallidum str. Nichols] gi|189018204|gb|ACD70822.1| flagellar basal-body rod protein [Treponema pallidum subsp. pallidum SS14] gi|291059786|gb|ADD72521.1| flagellar basal-body rod protein FlgB [Treponema pallidum subsp. pallidum str. Chicago] Length = 136 Score = 42.5 bits (98), Expect = 0.052, Method: Composition-based stats. Identities = 11/62 (17%), Positives = 20/62 (32%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A R A+N++N + GF+ V F + + + SF + Sbjct: 14 ALDVNALRYEVTANNLANAEVPGFKRTDVNFEAELKRALDSQRNETSFFKQATAGTNMLS 73 Query: 71 GS 72 Sbjct: 74 SD 75 >gi|317178579|dbj|BAJ56367.1| flagellar hook-associated protein FlgK [Helicobacter pylori F30] Length = 606 Score = 42.5 bits (98), Expect = 0.052, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 14/37 (37%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S + EM +I + + +I ++ + + Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLL 602 Score = 36.8 bits (83), Expect = 2.7, Method: Composition-based stats. Identities = 6/29 (20%), Positives = 11/29 (37%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTD 30 +S N A + + +N+SN Sbjct: 5 LSSLNASYTGLQAHQSMVDVTGNNISNAS 33 >gi|89092142|ref|ZP_01165097.1| flagellar hook-associated protein [Oceanospirillum sp. MED92] gi|89083877|gb|EAR63094.1| flagellar hook-associated protein [Oceanospirillum sp. MED92] Length = 750 Score = 42.5 bits (98), Expect = 0.052, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 18/42 (42%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 + +G + A + L+ N+SN +T G+ + F Sbjct: 1 MSLLLLGTQSLQANQSALAVTGQNISNVNTEGYSRQRPVFES 42 >gi|191168469|ref|ZP_03030257.1| flagellar hook-associated protein FlgK [Escherichia coli B7A] gi|190901488|gb|EDV61249.1| flagellar hook-associated protein FlgK [Escherichia coli B7A] Length = 547 Score = 42.5 bits (98), Expect = 0.052, Method: Composition-based stats. Identities = 13/119 (10%), Positives = 38/119 (31%), Gaps = 2/119 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI--DQKISF 58 M + N ++ A + L+T ++N+S+ + G+ ++ + + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV 60 Query: 59 VASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSA 117 +EY + + T+ + + T ++ D + + Sbjct: 61 SGVQREYDAFITNQLRAAQTQSSGLIARYEQMSKIDNMLSTSTSSLATQMQDFFTSLQT 119 >gi|227876737|ref|ZP_03994846.1| flagellar basal body rod protein [Mobiluncus mulieris ATCC 35243] gi|269976264|ref|ZP_06183260.1| flagellar basal-body rod protein FlgC [Mobiluncus mulieris 28-1] gi|306817684|ref|ZP_07451426.1| flagellar basal-body rod protein FlgC [Mobiluncus mulieris ATCC 35239] gi|307699910|ref|ZP_07636961.1| flagellar basal-body rod protein FlgC [Mobiluncus mulieris FB024-16] gi|227842634|gb|EEJ52834.1| flagellar basal body rod protein [Mobiluncus mulieris ATCC 35243] gi|269935593|gb|EEZ92131.1| flagellar basal-body rod protein FlgC [Mobiluncus mulieris 28-1] gi|304649498|gb|EFM46781.1| flagellar basal-body rod protein FlgC [Mobiluncus mulieris ATCC 35239] gi|307614948|gb|EFN94166.1| flagellar basal-body rod protein FlgC [Mobiluncus mulieris FB024-16] Length = 132 Score = 42.5 bits (98), Expect = 0.053, Method: Composition-based stats. Identities = 12/111 (10%), Positives = 28/111 (25%), Gaps = 8/111 (7%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDI--DQK 55 + I + L ++DN++N +T FR V V Sbjct: 6 AIGIAGTGMTVNRKWLDCISDNIANINTTKPMNEEAFRARYVVAQAVDYGRPAGTMVAGI 65 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106 G+ + + + G ++ + + + Sbjct: 66 ALGGTDGRIVYDPKDPNANAEGYVRHPDIDLGSQMSQLIMAQRAYQANAAV 116 Score = 40.6 bits (93), Expect = 0.21, Method: Composition-based stats. Identities = 14/133 (10%), Positives = 32/133 (24%), Gaps = 6/133 (4%) Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 G + E G + M Sbjct: 3 TFGAIGIAGTGMTVNRKWLDCISDNIANINTTKPMNEEAFRARYVVAQAVDYGRPAGTMV 62 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 G G P P + G++ + + +M Q+I + + + + Sbjct: 63 AGIALGGTDGRIVYDPKDPNANAE------GYVRHPDIDLGSQMSQLIMAQRAYQANAAV 116 Query: 227 IDENEKSMLEAIR 239 +D + + A++ Sbjct: 117 VDRAKATYESALQ 129 >gi|94987302|ref|YP_595235.1| flagellar basal body rod protein FlgB [Lawsonia intracellularis PHE/MN1-00] gi|94731551|emb|CAJ54914.1| Flagellar basal body protein [Lawsonia intracellularis PHE/MN1-00] Length = 137 Score = 42.5 bits (98), Expect = 0.053, Method: Composition-based stats. Identities = 7/39 (17%), Positives = 17/39 (43%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50 QR + + N++N +T +R ++F + + Sbjct: 16 MDMQLQRQNVIMSNIANVNTPRYRPRTIEFEDQLQKALG 54 >gi|12620925|gb|AAG61142.1| flagellar hook-associated protein 1 [Helicobacter pylori] Length = 606 Score = 42.5 bits (98), Expect = 0.053, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 14/37 (37%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S + EM +I + + +I ++ + + Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLL 602 Score = 36.8 bits (83), Expect = 2.7, Method: Composition-based stats. Identities = 6/29 (20%), Positives = 11/29 (37%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTD 30 +S N A + + +N+SN Sbjct: 5 LSSLNASYTGLQAHQSMVDVTGNNISNAS 33 >gi|74317655|ref|YP_315395.1| flagellar basal-body rod protein FlgB [Thiobacillus denitrificans ATCC 25259] gi|74057150|gb|AAZ97590.1| flagellar basal-body rod protein FlgB [Thiobacillus denitrificans ATCC 25259] Length = 133 Score = 42.5 bits (98), Expect = 0.054, Method: Composition-based stats. Identities = 11/67 (16%), Positives = 22/67 (32%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A +QR +A N++N DT ++ + F + + +A+ Sbjct: 15 ALRVRDQRQQVLASNIANADTPHYKARDLDFKTALQGALQGTQTGGTALATTAPGHLAGK 74 Query: 71 GSFISTG 77 G Sbjct: 75 AGGSDAG 81 >gi|317011316|gb|ADU85063.1| flagellar hook-associated protein FlgK [Helicobacter pylori SouthAfrica7] Length = 606 Score = 42.5 bits (98), Expect = 0.054, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 14/37 (37%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S + EM +I + + +I ++ + + Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLL 602 Score = 40.6 bits (93), Expect = 0.21, Method: Composition-based stats. Identities = 6/29 (20%), Positives = 11/29 (37%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTD 30 +S N A + + +N+SN Sbjct: 5 LSSLNTSYTGLQAHQSMMDVTGNNISNAS 33 >gi|297538893|ref|YP_003674662.1| flagellar basal-body rod protein FlgB [Methylotenera sp. 301] gi|297258240|gb|ADI30085.1| flagellar basal-body rod protein FlgB [Methylotenera sp. 301] Length = 140 Score = 42.5 bits (98), Expect = 0.054, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 27/80 (33%), Gaps = 4/80 (5%) Query: 1 MQTSFNIGLA----AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56 M + L+ A QR +A N++N DT F+ + F + + I++ Sbjct: 1 MLNRLDEALSFHQNALRVRGQRQELIAANIANADTPNFKARDIDFKAAMQSAVAGINKDA 60 Query: 57 SFVASGKEYLSKEVGSFIST 76 A + S Sbjct: 61 FQTAKTSPLHLDGSRASNSN 80 >gi|188579864|ref|YP_001923309.1| flagellar basal body rod protein FlgB [Methylobacterium populi BJ001] gi|179343362|gb|ACB78774.1| flagellar basal body rod protein [Methylobacterium populi BJ001] Length = 129 Score = 42.5 bits (98), Expect = 0.054, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 1/44 (2%) Query: 15 LEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIKNDIDQKIS 57 L R +T+A N++N +T G++ V F++V+ D+ + Sbjct: 18 LATRQATIAGNVANANTPGYKARDVVPFAQVLARTGLDMSSTAN 61 >gi|42522141|ref|NP_967521.1| FlgK, flagellar hook-associated protein [Bdellovibrio bacteriovorus HD100] gi|39574672|emb|CAE78514.1| FlgK, flagellar hook-associated protein [Bdellovibrio bacteriovorus HD100] Length = 469 Score = 42.5 bits (98), Expect = 0.054, Method: Composition-based stats. Identities = 6/38 (15%), Positives = 15/38 (39%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S + E +MI + +++ LI ++ + Sbjct: 428 SGVSLDEETTKMIEFQKTYDASARLIKTADEMFDTVLN 465 Score = 39.1 bits (89), Expect = 0.52, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 18/40 (45%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 + G + + + L TV N++N T GF +V+ Sbjct: 7 MMDTGKRSLMNSQTALQTVGHNIANKSTEGFSRQRVELQT 46 >gi|307131612|ref|YP_003883628.1| flagellar basal-body rod protein flgB [Dickeya dadantii 3937] gi|306529141|gb|ADM99071.1| Flagellar basal-body rod protein flgB [Dickeya dadantii 3937] Length = 139 Score = 42.5 bits (98), Expect = 0.055, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 25/79 (31%), Gaps = 4/79 (5%) Query: 1 MQTSFNIGL----AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56 M + L A QR +A N++N DT G++ + F+ + + Sbjct: 1 MLDKLDTALRFQQEALNLRAQRQEILAANIANADTPGYQARDIDFASELNKVMEQGRASG 60 Query: 57 SFVASGKEYLSKEVGSFIS 75 V+ + Sbjct: 61 QSVSLSLTSARHIPAQTVQ 79 >gi|315587007|gb|ADU41388.1| flagellar hook-associated protein FlgK [Helicobacter pylori 35A] Length = 606 Score = 42.5 bits (98), Expect = 0.055, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 14/37 (37%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S + EM +I + + +I ++ + + Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLL 602 Score = 36.8 bits (83), Expect = 2.8, Method: Composition-based stats. Identities = 6/29 (20%), Positives = 11/29 (37%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTD 30 +S N A + + +N+SN Sbjct: 5 LSSLNASYTGLQAHQSMVDVTGNNISNAS 33 >gi|261838448|gb|ACX98214.1| flagellar hook-associated protein 1 [Helicobacter pylori 51] Length = 606 Score = 42.5 bits (98), Expect = 0.055, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 14/37 (37%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S + EM +I + + +I ++ + + Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLL 602 Score = 36.8 bits (83), Expect = 2.8, Method: Composition-based stats. Identities = 6/29 (20%), Positives = 11/29 (37%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTD 30 +S N A + + +N+SN Sbjct: 5 LSSLNASYTGLQAHQSMVDVTGNNISNAS 33 >gi|188534173|ref|YP_001907970.1| flagellar basal body rod protein FlgB [Erwinia tasmaniensis Et1/99] gi|188029215|emb|CAO97087.1| Flagellar basal-body rod protein [Erwinia tasmaniensis Et1/99] Length = 137 Score = 42.5 bits (98), Expect = 0.055, Method: Composition-based stats. Identities = 10/66 (15%), Positives = 25/66 (37%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR +A N++N DT G++ + F+ + + + + ++ Sbjct: 15 ALNLRAQRQEILASNIANADTPGYQARDIDFASQLSKAVENGRAQGTGLSLAVTSARHIP 74 Query: 71 GSFIST 76 + + Sbjct: 75 AETLQS 80 >gi|187778745|ref|ZP_02995218.1| hypothetical protein CLOSPO_02340 [Clostridium sporogenes ATCC 15579] gi|187772370|gb|EDU36172.1| hypothetical protein CLOSPO_02340 [Clostridium sporogenes ATCC 15579] Length = 133 Score = 42.5 bits (98), Expect = 0.055, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 26/58 (44%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSK 68 + A R +++N++N +T G++ V F E + N+I+ K++ Sbjct: 19 SMDASSYRGRAISNNIANYNTPGYKRHYVTFEETLKDNLNNINMKVTTEKHMNNGAEF 76 >gi|332673917|gb|AEE70734.1| flagellar hook-associated protein FlgK [Helicobacter pylori 83] Length = 606 Score = 42.5 bits (98), Expect = 0.055, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 14/37 (37%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S + EM +I + + +I ++ + + Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLL 602 Score = 38.7 bits (88), Expect = 0.74, Method: Composition-based stats. Identities = 6/29 (20%), Positives = 11/29 (37%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTD 30 +S N A + + +N+SN Sbjct: 5 LSSLNTSYTGLQAHQSMVDVTGNNISNAS 33 >gi|294013092|ref|YP_003546552.1| flagellar hook-associated protein 1 FlgK [Sphingobium japonicum UT26S] gi|292676422|dbj|BAI97940.1| flagellar hook-associated protein 1 FlgK [Sphingobium japonicum UT26S] Length = 446 Score = 42.5 bits (98), Expect = 0.055, Method: Composition-based stats. Identities = 26/245 (10%), Positives = 64/245 (26%), Gaps = 33/245 (13%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M F IG + A ++ V++N++N T G+ V + + +A Sbjct: 1 MSDLFIIGASGTKAYRTAMAAVSENIANASTEGYSRRSV--------TTVESGSSTATMA 52 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + S D L + T ++ S Sbjct: 53 VYISRANFGGTDVKSVNRATDPYL----------DATVRYTNTQLGSAVARMRWLTDSET 102 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 + + + + + +V + V Q F + + Sbjct: 103 ALNDTETGIGQLMTGMFQNMDKLAASPNDKSLRVTTLDSIGRVA--QAFNQTAADLAQVS 160 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQ----MIHLTQKFNSITTLIDENEKSMLE 236 S T+ + ++ + ++ ++ L+D + ++ Sbjct: 161 SGIATEAQASVTTINQ---------ALSALADINNSLLRAQPGTSAYAQLLDSRDAALGT 211 Query: 237 AIRNI 241 N+ Sbjct: 212 LSSNL 216 >gi|251780661|ref|ZP_04823581.1| flagellar basal-body rod protein FlgB [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243084976|gb|EES50866.1| flagellar basal-body rod protein FlgB [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 133 Score = 42.5 bits (98), Expect = 0.055, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 19/40 (47%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50 A R +A+NM+N +T G++ V F E + + Sbjct: 18 GLKASNARSKAIANNMANINTKGYKKFNVIFEENLKNNSD 57 >gi|222095367|ref|YP_002529427.1| flagellar basal body rod protein flgb [Bacillus cereus Q1] gi|221239425|gb|ACM12135.1| flagellar basal-body rod protein FlgB [Bacillus cereus Q1] Length = 172 Score = 42.5 bits (98), Expect = 0.055, Method: Composition-based stats. Identities = 11/72 (15%), Positives = 28/72 (38%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 L + +TV+ N++N +T G++ V F+E + + + + + Sbjct: 49 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKSNTADLKTNADLYQTNEM 108 Query: 72 SFISTGTELDFA 83 + + +A Sbjct: 109 HLPTVNAKNTYA 120 >gi|293605009|ref|ZP_06687405.1| flagellar hook-associated protein 1 [Achromobacter piechaudii ATCC 43553] gi|292816614|gb|EFF75699.1| flagellar hook-associated protein 1 [Achromobacter piechaudii ATCC 43553] Length = 557 Score = 42.5 bits (98), Expect = 0.055, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 18/38 (47%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39 + L A + L+T + N++N TVG+ +V Sbjct: 1 MNLYKTALGGLNAAQAGLATTSHNINNATTVGYNRQRV 38 >gi|238919256|ref|YP_002932771.1| flagellar basal body rod protein FlgB [Edwardsiella ictaluri 93-146] gi|238868825|gb|ACR68536.1| flagellar basal-body rod protein FlgB, putative [Edwardsiella ictaluri 93-146] Length = 137 Score = 42.5 bits (98), Expect = 0.055, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 24/65 (36%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR +A N++N DT G++ + F+ + + + S +A Sbjct: 15 ALNLRAQRQEILAANIANADTPGYQARDIDFASQLSRVLENGRPDGSGIALTLTSARHIP 74 Query: 71 GSFIS 75 + Sbjct: 75 AQNVQ 79 >gi|94263281|ref|ZP_01287097.1| conserved hypothetical protein [delta proteobacterium MLMS-1] gi|93456364|gb|EAT06488.1| conserved hypothetical protein [delta proteobacterium MLMS-1] Length = 879 Score = 42.5 bits (98), Expect = 0.055, Method: Composition-based stats. Identities = 5/41 (12%), Positives = 17/41 (41%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S + EM +I + + +I +++ ++ + + Sbjct: 839 SGVSLDEEMANLIKFQHAYTAAARMISMSDEMLVTLLDTVR 879 Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 9/39 (23%), Positives = 16/39 (41%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 N+ A L + + N++N DT G+ K+ Sbjct: 8 LNLAKQALLTHQSSIQVAGHNVANVDTPGYTRQKINIEA 46 >gi|207092063|ref|ZP_03239850.1| flagellar hook-associated protein FlgK [Helicobacter pylori HPKX_438_AG0C1] Length = 606 Score = 42.5 bits (98), Expect = 0.056, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 14/37 (37%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S + EM +I + + +I ++ + + Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLL 602 Score = 38.7 bits (88), Expect = 0.74, Method: Composition-based stats. Identities = 6/29 (20%), Positives = 11/29 (37%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTD 30 +S N A + + +N+SN Sbjct: 5 LSSLNTSYTGLQAHQSMVDVTGNNISNAS 33 >gi|167567748|ref|ZP_02360664.1| flagellar basal-body rod protein FlgC [Burkholderia oklahomensis EO147] gi|167574699|ref|ZP_02367573.1| flagellar basal-body rod protein FlgC [Burkholderia oklahomensis C6786] Length = 138 Score = 42.5 bits (98), Expect = 0.056, Method: Composition-based stats. Identities = 7/42 (16%), Positives = 19/42 (45%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G + N + + EM M+ T+ +++ ++ +E + Sbjct: 93 GNVLYPNVDPVEEMTDMLSSTRAYSTNVEVLGRVNGMQMELL 134 Score = 37.2 bits (84), Expect = 2.0, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 35/99 (35%), Gaps = 7/99 (7%) Query: 7 IGLAAQLALEQRLSTVADNMSNT----DTVG--FRTIKVKFSEVVGAIKNDIDQKISFVA 60 I +A A RL+T+A N++N T +R K F+ + + + Sbjct: 9 IAGSAMAAQTVRLNTIASNLANADAASSTEASTYRARKPVFASIFKVGADGEVNGAAVQV 68 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 ++ + G L A +G+ + P + Sbjct: 69 LDVVQSTEPLRKVHQPGNPLADA-DGNVLYPNVDPVEEM 106 >gi|261341496|ref|ZP_05969354.1| flagellar basal-body rod protein FlgC [Enterobacter cancerogenus ATCC 35316] gi|288316292|gb|EFC55230.1| flagellar basal-body rod protein FlgC [Enterobacter cancerogenus ATCC 35316] Length = 141 Score = 42.5 bits (98), Expect = 0.056, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 22/47 (46%), Gaps = 6/47 (12%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGA 47 + +A A RL+T+A N++N +T ++ + F+ V Sbjct: 9 VSGSAMTAQTVRLNTIASNLANAETPAVDEGNVYKARRPVFAAVYQN 55 Score = 40.6 bits (93), Expect = 0.20, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 20/43 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ + N + EM M+ ++ F + +++ + +R Sbjct: 95 GYVWYPDINVVEEMADMMSASRNFETNVDVLNNVKSMQQSLLR 137 >gi|149182500|ref|ZP_01860973.1| flagellar basal-body rod protein B [Bacillus sp. SG-1] gi|148849760|gb|EDL63937.1| flagellar basal-body rod protein B [Bacillus sp. SG-1] Length = 129 Score = 42.5 bits (98), Expect = 0.056, Method: Composition-based stats. Identities = 5/41 (12%), Positives = 16/41 (39%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50 + ++ N++N DT ++ + F + + + Sbjct: 13 NGLNYSSAKQKVISQNIANVDTPNYKAKSISFKDQLNESIS 53 >gi|218549199|ref|YP_002382990.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia fergusonii ATCC 35469] gi|218356740|emb|CAQ89368.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia fergusonii ATCC 35469] gi|324113868|gb|EGC07842.1| flagellar basal-body rod protein FlgB [Escherichia fergusonii B253] gi|325497619|gb|EGC95478.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia fergusonii ECD227] Length = 163 Score = 42.2 bits (97), Expect = 0.057, Method: Composition-based stats. Identities = 12/62 (19%), Positives = 22/62 (35%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR +A N++N DT G++ + F+ + I + V+ Sbjct: 40 ALNLRAQRQEVLAANIANADTPGYQARDLDFASELKKIMVRGRNEAQGVSLTLTSTQHIP 99 Query: 71 GS 72 Sbjct: 100 AQ 101 >gi|317177869|dbj|BAJ55658.1| flagellar hook-associated protein FlgK [Helicobacter pylori F16] Length = 606 Score = 42.2 bits (97), Expect = 0.057, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 14/37 (37%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S + EM +I + + +I ++ + + Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLL 602 Score = 36.8 bits (83), Expect = 2.9, Method: Composition-based stats. Identities = 6/29 (20%), Positives = 11/29 (37%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTD 30 +S N A + + +N+SN Sbjct: 5 LSSLNASYTGLQAHQSMVDVTGNNISNAS 33 >gi|220922288|ref|YP_002497590.1| flagellar hook-associated protein FlgK [Methylobacterium nodulans ORS 2060] gi|219946895|gb|ACL57287.1| flagellar hook-associated protein FlgK [Methylobacterium nodulans ORS 2060] Length = 623 Score = 42.2 bits (97), Expect = 0.057, Method: Composition-based stats. Identities = 6/39 (15%), Positives = 16/39 (41%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S N E+ ++I L + + ++ + + +R Sbjct: 584 QSGVNIDEELSRLIQLQSAYAANARVLTAAKDMIDTLMR 622 Score = 41.4 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 7/33 (21%), Positives = 14/33 (42%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGF 34 + N A + + V+ N++N T G+ Sbjct: 3 LNALNTATAGLQVTQAAIGIVSQNVANQSTPGY 35 >gi|73539456|ref|YP_299823.1| flagellar hook-associated protein FlgK [Ralstonia eutropha JMP134] gi|72122793|gb|AAZ64979.1| Protein of unknown function DUF1078 [Ralstonia eutropha JMP134] Length = 631 Score = 42.2 bits (97), Expect = 0.058, Method: Composition-based stats. Identities = 11/51 (21%), Positives = 21/51 (41%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 + F+IGL+ + L+T + N +N T G+ + G + Sbjct: 1 MSLFSIGLSGLNTAQNALTTTSHNFANAATEGYSRQNTIVASAGGQYTSQG 51 Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats. Identities = 7/37 (18%), Positives = 11/37 (29%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N E M+ Q + + +I I Sbjct: 591 SGVNMDEETVSMLRFQQMYQANARVIQAASTLFDTII 627 >gi|126443247|ref|YP_001061243.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei 668] gi|167725927|ref|ZP_02409163.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei DM98] gi|126222738|gb|ABN86243.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei 668] Length = 124 Score = 42.2 bits (97), Expect = 0.058, Method: Composition-based stats. Identities = 15/100 (15%), Positives = 30/100 (30%), Gaps = 4/100 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + A + +A N++N DT G++ + F + D A Sbjct: 10 GLHPAALKLRAERTK--VIASNLANLDTPGYQARDLDFKRSLAEAGGDGAHARPGDALTG 67 Query: 64 EYLSKEVGSFI--STGTELDFALEGDAWFALESPRGIILT 101 + G ++ +E A+ + LT Sbjct: 68 GVTLGYRVPYQAAQDGNTVELGIEQAAFAQNAVDFQMSLT 107 >gi|118474675|ref|YP_891310.1| flagellar hook-associated protein FlgK [Campylobacter fetus subsp. fetus 82-40] gi|118413901|gb|ABK82321.1| flagellar hook-associated protein FlgK [Campylobacter fetus subsp. fetus 82-40] Length = 617 Score = 42.2 bits (97), Expect = 0.059, Method: Composition-based stats. Identities = 7/40 (17%), Positives = 17/40 (42%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 S G + A + ++ N++N ++ + +V S Sbjct: 6 SLYTGASGLNAAQLQIQVTGQNITNINSDYYTRQRVVQSA 45 >gi|50954402|ref|YP_061690.1| flagellar basal-body rod protein [Leifsonia xyli subsp. xyli str. CTCB07] gi|50950884|gb|AAT88585.1| flagellar basal-body rod protein [Leifsonia xyli subsp. xyli str. CTCB07] Length = 132 Score = 42.2 bits (97), Expect = 0.059, Method: Composition-based stats. Identities = 4/45 (8%), Positives = 17/45 (37%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +G++ + + +M +I + + + + A++ Sbjct: 84 AQGYVRGTGIDLSVQMTNLIMAQRAYQANANTVSSARYMYQSALQ 128 >gi|307293781|ref|ZP_07573625.1| flagellar hook-associated protein FlgK [Sphingobium chlorophenolicum L-1] gi|306879932|gb|EFN11149.1| flagellar hook-associated protein FlgK [Sphingobium chlorophenolicum L-1] Length = 446 Score = 42.2 bits (97), Expect = 0.060, Method: Composition-based stats. Identities = 27/245 (11%), Positives = 64/245 (26%), Gaps = 33/245 (13%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M F IG + A ++ V++N++N T G+ V + + +A Sbjct: 1 MSDLFIIGASGTKAYRTAMAAVSENIANASTEGYSRRSV--------TTVESGSSTATMA 52 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + S D L + T ++ S Sbjct: 53 VYISRANFGGTDVKSVNRSTDPYL----------DATVRYTNTQLGSAVARMRWLTDSET 102 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 V + + + + +V + V Q F + + Sbjct: 103 ALNDTETGVGQLMTGMFQNMDKLAASPNDKSLRVTTLDSISRVA--QAFKQTAADLTQVS 160 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQ----MIHLTQKFNSITTLIDENEKSMLE 236 S T+ + ++ + ++ ++ L+D + ++ Sbjct: 161 SGIATEAQASVTTINQ---------ALSALADINNSLLRAQPGTSAYAQLLDSRDAALGT 211 Query: 237 AIRNI 241 N+ Sbjct: 212 LSSNL 216 >gi|220904841|ref|YP_002480153.1| flagellar basal-body rod protein FlgC [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869140|gb|ACL49475.1| flagellar basal-body rod protein FlgC [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 145 Score = 42.2 bits (97), Expect = 0.060, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 21/42 (50%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ + N + EM ++ + F + T +D + ++A+ Sbjct: 100 GYVMYPDINVVEEMANLMTAQRNFEANVTTVDAIKGMYVKAL 141 Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats. Identities = 9/31 (29%), Positives = 18/31 (58%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32 T+F+I + A R++T++ N++N T Sbjct: 4 MTAFDISASGLAADRTRINTISMNLANAKTT 34 >gi|163803167|ref|ZP_02197050.1| flagellar basal-body rod protein C [Vibrio sp. AND4] gi|159173067|gb|EDP57900.1| flagellar basal-body rod protein C [Vibrio sp. AND4] Length = 144 Score = 42.2 bits (97), Expect = 0.060, Method: Composition-based stats. Identities = 7/44 (15%), Positives = 20/44 (45%) Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +G++ + + + EM M+ T+ F + ++ + +R Sbjct: 96 QGYVYYPDIDVVSEMADMMSATRSFETNVEVLTNVKSMQQGLLR 139 Score = 36.0 bits (81), Expect = 5.2, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 35/96 (36%), Gaps = 6/96 (6%) Query: 10 AAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +A A RL+TVA N++N D V ++ +K F+ V + D + A + Sbjct: 12 SAMTAQTVRLNTVASNLANADAVSANPDDAYKALKPVFATVYQKTQMTTDNGVYPNAEVR 71 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 + E + L + + ++ Sbjct: 72 IVDVVQSAGQAEQRFEPNNPLANNQGYVYYPDIDVV 107 >gi|254299689|ref|ZP_04967138.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei 406e] gi|157809389|gb|EDO86559.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei 406e] Length = 131 Score = 42.2 bits (97), Expect = 0.060, Method: Composition-based stats. Identities = 15/100 (15%), Positives = 30/100 (30%), Gaps = 4/100 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + A + +A N++N DT G++ + F + D A Sbjct: 17 GLHPAALKLRAERTK--VIASNLANLDTPGYQARDLDFKRSLAEAGGDGAHARPGDALTG 74 Query: 64 EYLSKEVGSFI--STGTELDFALEGDAWFALESPRGIILT 101 + G ++ +E A+ + LT Sbjct: 75 GVTLGYRVPYQAAQDGNTVELGIEQAAFAQNAVDFQMSLT 114 >gi|149189834|ref|ZP_01868114.1| flagellar basal body rod protein [Vibrio shilonii AK1] gi|148836320|gb|EDL53277.1| flagellar basal body rod protein [Vibrio shilonii AK1] Length = 144 Score = 42.2 bits (97), Expect = 0.060, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 18/43 (41%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ + + EM M+ T+ F + ++ + +R Sbjct: 97 GYVYYPGVDVVAEMADMMSATRSFETNVEVLANVKSMQQGLLR 139 Score = 40.6 bits (93), Expect = 0.17, Method: Composition-based stats. Identities = 19/99 (19%), Positives = 37/99 (37%), Gaps = 6/99 (6%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKISFVA 60 I +A A RL+TVA N++N D V ++ +K F+ V + Q + A Sbjct: 9 IAGSAMTAQTVRLNTVASNLANADAVSANPDDAYKALKPVFATVYSQTQLAAGQNVYPNA 68 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 + + + E + L + + ++ Sbjct: 69 EVRIVDVVQSDAKADQRFEPNNPLANEEGYVYYPGVDVV 107 >gi|307293789|ref|ZP_07573633.1| flagellar basal-body rod protein FlgC [Sphingobium chlorophenolicum L-1] gi|306879940|gb|EFN11157.1| flagellar basal-body rod protein FlgC [Sphingobium chlorophenolicum L-1] Length = 136 Score = 42.2 bits (97), Expect = 0.061, Method: Composition-based stats. Identities = 8/36 (22%), Positives = 18/36 (50%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +S E+ MI + + + +++ + M+E IR Sbjct: 98 VDSSAELVDMIETARMYQNNVQVLNTAKSLMMETIR 133 Score = 35.6 bits (80), Expect = 5.8, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 30/87 (34%), Gaps = 6/87 (6%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSEVVGAIKNDIDQK 55 F+I A A RL+ A NM+N + G +R IK F V + + Sbjct: 7 MNVFDIAGRAMSAQLVRLNATASNMANAGNVTGSAAEAYRAIKPVFQSVTDSPGVSTVKV 66 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDF 82 + V + + + + D Sbjct: 67 QNVVTTNAQPTKRHDPNHPLADKNGDV 93 >gi|68164548|gb|AAY87277.1| predicted flagellar proximal rod protein [uncultured bacterium BAC17H8] Length = 138 Score = 42.2 bits (97), Expect = 0.062, Method: Composition-based stats. Identities = 7/45 (15%), Positives = 19/45 (42%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + GF+ + N E +M+ +++ + ++ M+ I Sbjct: 91 QDGFVYAAAVNVEEEFVEMLEAKRQYQNNVEVVTTLRALMMRTIN 135 Score = 37.5 bits (85), Expect = 1.7, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 30/86 (34%), Gaps = 6/86 (6%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQK 55 F++ + A RL+T+A N++N + +R +K F A D Sbjct: 5 DNIFDVASRSMSAQLVRLNTIASNLANAGNISGSEDQAYRAMKPIFKTTYAANVKDSGIS 64 Query: 56 ISFVASGKEYLSKEVGSFISTGTELD 81 + VA + ++ D Sbjct: 65 TTEVAGITTSERRPERIYMPNHPLSD 90 >gi|307721502|ref|YP_003892642.1| flagellar hook-associated protein FlgK [Sulfurimonas autotrophica DSM 16294] gi|306979595|gb|ADN09630.1| flagellar hook-associated protein FlgK [Sulfurimonas autotrophica DSM 16294] Length = 626 Score = 42.2 bits (97), Expect = 0.062, Method: Composition-based stats. Identities = 5/35 (14%), Positives = 13/35 (37%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 + EM +I + + +I ++ M + Sbjct: 588 VSIDEEMTNLIKYQTSYGAAAKVITTVDQMMQTLL 622 Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats. Identities = 10/82 (12%), Positives = 32/82 (39%), Gaps = 2/82 (2%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV--VGAIKNDIDQKISFVA 60 + +IG + + ++T N++N + G+ +V S + D+ + Sbjct: 6 NTLSIGYSGLSTAQVGINTTGHNIANAENEGYTRQRVVTSAANPLITSAGDVGNGVEVQD 65 Query: 61 SGKEYLSKEVGSFISTGTELDF 82 + + + + S ++ ++ Sbjct: 66 IKRVFDNFVFDRYNSISSDKEY 87 >gi|237810458|ref|YP_002894909.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei MSHR346] gi|237506387|gb|ACQ98705.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei MSHR346] Length = 163 Score = 42.2 bits (97), Expect = 0.062, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 27/93 (29%), Gaps = 1/93 (1%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A R ++ N++N DT G+R V FS + + A+ Sbjct: 15 ALDVRAYRQELLSSNIANADTPGYRARDVDFSSTLARALKQDGATSAGNAAQLPLAQPAG 74 Query: 71 GSFISTGTELDFA-LEGDAWFALESPRGIILTR 102 + + A L G+ R Sbjct: 75 VASGMSMATTSGAHLAGNVKLIPTGGPSDDYGR 107 >gi|171059406|ref|YP_001791755.1| flagellar hook-associated protein FlgK [Leptothrix cholodnii SP-6] gi|170776851|gb|ACB34990.1| flagellar hook-associated protein FlgK [Leptothrix cholodnii SP-6] Length = 640 Score = 42.2 bits (97), Expect = 0.062, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 22/79 (27%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 N+G A A + +L T N++N + G+ + V G Sbjct: 7 LNLGTRAMFASQAQLQTTGHNIANANVAGYSRQDTVLTTVGGQYSGAGYYGRGVAVQTVT 66 Query: 65 YLSKEVGSFISTGTELDFA 83 + T A Sbjct: 67 RAVSAFQTDQVAQTRAQAA 85 >gi|54308094|ref|YP_129114.1| flagellar basal body rod protein FlgB [Photobacterium profundum SS9] gi|46912520|emb|CAG19312.1| putative polar flagellar FlgB [Photobacterium profundum SS9] Length = 131 Score = 42.2 bits (97), Expect = 0.062, Method: Composition-based stats. Identities = 8/37 (21%), Positives = 19/37 (51%) Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 +R +A N++N +T G++ + F + A + + Sbjct: 21 KRAEILASNIANANTPGYKAKDMDFGRALKAATSGAN 57 >gi|160939640|ref|ZP_02086988.1| hypothetical protein CLOBOL_04532 [Clostridium bolteae ATCC BAA-613] gi|158437431|gb|EDP15195.1| hypothetical protein CLOBOL_04532 [Clostridium bolteae ATCC BAA-613] Length = 484 Score = 42.2 bits (97), Expect = 0.063, Method: Composition-based stats. Identities = 23/202 (11%), Positives = 48/202 (23%), Gaps = 8/202 (3%) Query: 41 FSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL 100 F++++ + + F + D F L+ + Sbjct: 287 FTDMLTGADPINAGIPYYQNKMDNFAQTLADVFNNKIHADDPDFPDKYKFLLQGGVDGKV 346 Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 T VS + D I F G + + Sbjct: 347 TAGNISISDQWADDVSYIIRKQNPDGELDNQDILDMKAAFEQDFNFGGEYTGTF--SEFI 404 Query: 161 YSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKF 220 SV + G + NS S G + E M+ + + Sbjct: 405 TSVTNTLGSGIKTNSARMSASLAIAESADSERMGVSG------VSLNEEGISMMTYNKAY 458 Query: 221 NSITTLIDENEKSMLEAIRNIA 242 ++ L+ ++ + I + Sbjct: 459 QALGRLMTTMDEQLDMIINKMG 480 Score = 36.4 bits (82), Expect = 3.9, Method: Composition-based stats. Identities = 6/37 (16%), Positives = 15/37 (40%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 ++ + V +N+SN+ T G+ ++ Sbjct: 2 GLETAKRGIQVNQKAIDIVGNNISNSKTKGYTRQRLD 38 >gi|126734126|ref|ZP_01749873.1| flagellar hook-associated protein FlgK [Roseobacter sp. CCS2] gi|126716992|gb|EBA13856.1| flagellar hook-associated protein FlgK [Roseobacter sp. CCS2] Length = 480 Score = 42.2 bits (97), Expect = 0.063, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 20/44 (45%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44 M ++ N + A + V+ N+SN T G+ V+ S V Sbjct: 1 MSSALNNAVTGLTATSRMAEVVSSNLSNALTEGYGRRGVELSSV 44 >gi|300114802|ref|YP_003761377.1| flagellar basal-body rod protein FlgB [Nitrosococcus watsonii C-113] gi|299540739|gb|ADJ29056.1| flagellar basal-body rod protein FlgB [Nitrosococcus watsonii C-113] Length = 131 Score = 42.2 bits (97), Expect = 0.064, Method: Composition-based stats. Identities = 8/37 (21%), Positives = 17/37 (45%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 +R +A N++N DT G++ + F + + Sbjct: 20 SRRAEILAANLANGDTPGYKARDIDFKAALQQAQGQG 56 >gi|297380296|gb|ADI35183.1| flagellar hook-associated protein FlgK [Helicobacter pylori v225d] Length = 606 Score = 42.2 bits (97), Expect = 0.064, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 14/37 (37%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S + EM +I + + +I ++ + + Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVISAIDRMIDTLL 602 Score = 36.8 bits (83), Expect = 2.6, Method: Composition-based stats. Identities = 6/29 (20%), Positives = 11/29 (37%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTD 30 +S N A + + +N+SN Sbjct: 5 LSSLNASYTGLQAHQSMVDVTGNNISNAS 33 >gi|229029418|ref|ZP_04185501.1| Flagellar hook-associated protein FlgK [Bacillus cereus AH1271] gi|228731877|gb|EEL82776.1| Flagellar hook-associated protein FlgK [Bacillus cereus AH1271] Length = 432 Score = 42.2 bits (97), Expect = 0.064, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 25/53 (47%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 N L+ LA + L T N+SN T G+ V F V + + +Q+I + Sbjct: 7 NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQAVNFGSVGASNGHTPEQRIGY 59 Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 5/34 (14%), Positives = 11/34 (32%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 N EM ++ + F + + I + Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAISTMNEVFDSL 427 >gi|167835108|ref|ZP_02461991.1| flagellar basal body rod protein FlgB [Burkholderia thailandensis MSMB43] Length = 163 Score = 42.2 bits (97), Expect = 0.064, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 26/93 (27%), Gaps = 1/93 (1%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A R ++ N++N DT G+R V FS + + + Sbjct: 15 ALDVRAYRQELLSSNIANADTPGYRARDVDFSSTLARALKQDGAASAGNGATLPLAQPAG 74 Query: 71 GSFISTGTELDFA-LEGDAWFALESPRGIILTR 102 + + A L G+ R Sbjct: 75 VTSGMSMAATSGAHLAGNVKLIPTGGPSDDYGR 107 >gi|86356310|ref|YP_468202.1| flagellar basal body rod protein FlgC [Rhizobium etli CFN 42] gi|86280412|gb|ABC89475.1| flagellar basal-body rod protein [Rhizobium etli CFN 42] Length = 138 Score = 42.2 bits (97), Expect = 0.064, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 27/80 (33%), Gaps = 7/80 (8%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNT----DTVG---FRTIKVKFSEVVGAIKNDIDQKI 56 + I + A RL V++N++N DT G +R + F + + + Sbjct: 7 AMKIAGSGLEAQSTRLRIVSENIANARSTGDTPGADPYRRKTITFGQQMDRTSGVETVNV 66 Query: 57 SFVASGKEYLSKEVGSFIST 76 V + S E Sbjct: 67 KKVGVDEGDFSTEFDPSNPA 86 Score = 41.8 bits (96), Expect = 0.077, Method: Composition-based stats. Identities = 9/47 (19%), Positives = 19/47 (40%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G ++ N N + EM M + +++ I + + I + S Sbjct: 91 GVVKLPNVNILVEMADMREANRSYDANLQTIRQTRDLISSTIDLLKS 137 >gi|85058008|ref|YP_453710.1| flagellar basal-body rod protein FlgB [Sodalis glossinidius str. 'morsitans'] gi|84778528|dbj|BAE73305.1| flagellar basal-body rod protein FlgB [Sodalis glossinidius str. 'morsitans'] Length = 137 Score = 42.2 bits (97), Expect = 0.064, Method: Composition-based stats. Identities = 12/67 (17%), Positives = 27/67 (40%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69 AA L +R +A N++N DT G++ + F+ + Q+ + ++ Sbjct: 14 AALNILNRRQDVLAANIANADTPGYQARDIPFTRELRRAIEQGQQRSNNLSLSLTSRQHI 73 Query: 70 VGSFIST 76 ++ Sbjct: 74 PAEGVAH 80 >gi|313610113|gb|EFR85437.1| flagellar hook-associated protein FlgK [Listeria monocytogenes FSL F2-208] Length = 389 Score = 42.2 bits (97), Expect = 0.064, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 18/42 (42%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46 FN L+ A + N+SN +T G+ V + V G Sbjct: 6 FNTSLSGMSAAQIANMVAQQNISNMNTPGYIRQAVDQTAVYG 47 >gi|296102902|ref|YP_003613048.1| flagellar hook-associated protein FlgK [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057361|gb|ADF62099.1| flagellar hook-associated protein FlgK [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 545 Score = 42.2 bits (97), Expect = 0.064, Method: Composition-based stats. Identities = 9/52 (17%), Positives = 21/52 (40%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+TV++N+S+ + G+ + Sbjct: 1 MSSLINSAMSGLSAAQAALNTVSNNISSYNVAGYTRQTTVLGASNSTLTGGG 52 >gi|217032694|ref|ZP_03438180.1| hypothetical protein HPB128_202g28 [Helicobacter pylori B128] gi|298735878|ref|YP_003728403.1| flagellar hook-associated protein 1 FlgK [Helicobacter pylori B8] gi|216945624|gb|EEC24275.1| hypothetical protein HPB128_202g28 [Helicobacter pylori B128] gi|298355067|emb|CBI65939.1| flagellar hook-associated protein 1 FlgK [Helicobacter pylori B8] Length = 606 Score = 42.2 bits (97), Expect = 0.064, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 14/37 (37%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S + EM +I + + +I ++ + + Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVISAIDRMIDTLL 602 Score = 38.7 bits (88), Expect = 0.67, Method: Composition-based stats. Identities = 6/29 (20%), Positives = 11/29 (37%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTD 30 +S N A + + +N+SN Sbjct: 5 LSSLNTSYTGLQAHQSMVDVTGNNISNAS 33 >gi|207110317|ref|ZP_03244479.1| flagellar basal body rod protein FlgC [Helicobacter pylori HPKX_438_CA4C1] Length = 113 Score = 42.2 bits (97), Expect = 0.064, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 6/49 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44 +SF+I A R + ++ N++N +T G +R + F Sbjct: 3 LSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFKAF 51 >gi|17548572|ref|NP_521912.1| flagellar hook-associated protein FlgK [Ralstonia solanacearum GMI1000] gi|17430820|emb|CAD17502.1| probable flagellar hook-associated protein 1 [Ralstonia solanacearum GMI1000] Length = 642 Score = 42.2 bits (97), Expect = 0.064, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 26/83 (31%), Gaps = 2/83 (2%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE--VVGAIKNDIDQKISFVA 60 + NIG + L +N+SN T G+ + +E + + Q ++ Sbjct: 4 SLLNIGATGLRVADINLQVTGNNISNASTAGYSRQEAVQTENIPMATGAGYLGQGVNVTT 63 Query: 61 SGKEYLSKEVGSFISTGTELDFA 83 + Y S A Sbjct: 64 VKRIYDQFLTAQVQSGQAASSAA 86 >gi|291519600|emb|CBK74821.1| flagellar basal-body rod protein FlgB [Butyrivibrio fibrisolvens 16/4] Length = 132 Score = 42.2 bits (97), Expect = 0.065, Method: Composition-based stats. Identities = 10/35 (28%), Positives = 21/35 (60%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV 45 A A +R + + +N++N DT G++ ++F V+ Sbjct: 16 AADASWRRQTLILNNLANDDTPGYKRKDIEFGSVL 50 >gi|288962672|ref|YP_003452966.1| flagellar hook-associated protein 1 [Azospirillum sp. B510] gi|288914938|dbj|BAI76422.1| flagellar hook-associated protein 1 [Azospirillum sp. B510] Length = 465 Score = 42.2 bits (97), Expect = 0.065, Method: Composition-based stats. Identities = 9/49 (18%), Positives = 22/49 (44%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 + L+ +Q+ + ++ N++N T G+ ++ S V A + Sbjct: 6 ALTAALSGLRTTQQQAAMLSHNLANATTAGYVRRELDLSAVTTAGRGAG 54 >gi|260779349|ref|ZP_05888241.1| flagellar basal-body rod protein FlgC [Vibrio coralliilyticus ATCC BAA-450] gi|260605513|gb|EEX31808.1| flagellar basal-body rod protein FlgC [Vibrio coralliilyticus ATCC BAA-450] Length = 144 Score = 42.2 bits (97), Expect = 0.065, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 19/43 (44%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ + + + EM M+ T+ F + ++ + +R Sbjct: 97 GYVYYPDIDVVSEMADMMSATRSFETNVEVLSNVKSMQQGLLR 139 Score = 38.7 bits (88), Expect = 0.72, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 6/65 (9%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKISFVA 60 I +A A RL+TVA N++N D V ++ +K F+ V + ++ A Sbjct: 9 IAGSAMNAQTVRLNTVASNLANADAVSANPDDAYKALKPVFATVYSKTQLSASKESYPNA 68 Query: 61 SGKEY 65 + Sbjct: 69 EVRIV 73 >gi|118475637|ref|YP_891881.1| flagellar basal body rod protein FlgB [Campylobacter fetus subsp. fetus 82-40] gi|118414863|gb|ABK83283.1| flagellar basal-body rod protein FlgB [Campylobacter fetus subsp. fetus 82-40] Length = 146 Score = 42.2 bits (97), Expect = 0.065, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 6/64 (9%) Query: 1 MQTSFNIGLA------AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54 M F+ + A R +A N++N DT +++ V F + A KN+I Sbjct: 1 MYAGFSTSKSKQLVEAALEGRVLRQKLIASNIANIDTPFYKSKDVDFESALIAKKNEIYS 60 Query: 55 KISF 58 K S Sbjct: 61 KNSG 64 >gi|326796591|ref|YP_004314411.1| flagellar hook-associated protein FlgK [Marinomonas mediterranea MMB-1] gi|326547355|gb|ADZ92575.1| flagellar hook-associated protein FlgK [Marinomonas mediterranea MMB-1] Length = 659 Score = 42.2 bits (97), Expect = 0.066, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 24/44 (54%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46 + NIGL+ R+STV N+SN DT G+ + S V+G Sbjct: 4 SLLNIGLSGLQTSSARISTVGQNVSNVDTEGYNRQETATSSVLG 47 >gi|308063903|gb|ADO05790.1| flagellar hook-associated protein FlgK [Helicobacter pylori Sat464] Length = 606 Score = 42.2 bits (97), Expect = 0.066, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 14/37 (37%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S + EM +I + + +I ++ + + Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVISAIDRMIDTLL 602 Score = 36.8 bits (83), Expect = 2.6, Method: Composition-based stats. Identities = 6/29 (20%), Positives = 11/29 (37%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTD 30 +S N A + + +N+SN Sbjct: 5 LSSLNASYTGLQAHQSMVDVTGNNISNAS 33 >gi|188527901|ref|YP_001910588.1| flagellar hook-associated protein FlgK [Helicobacter pylori Shi470] gi|188144141|gb|ACD48558.1| flagellar hook-associated protein FlgK [Helicobacter pylori Shi470] gi|308062395|gb|ADO04283.1| flagellar hook-associated protein FlgK [Helicobacter pylori Cuz20] Length = 606 Score = 42.2 bits (97), Expect = 0.066, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 14/37 (37%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S + EM +I + + +I ++ + + Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVISAIDRMIDTLL 602 Score = 36.8 bits (83), Expect = 2.6, Method: Composition-based stats. Identities = 6/29 (20%), Positives = 11/29 (37%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTD 30 +S N A + + +N+SN Sbjct: 5 LSSLNASYTGLQAHQSMVDVTGNNISNAS 33 >gi|119503642|ref|ZP_01625725.1| flagellar basal-body rod protein FlgC [marine gamma proteobacterium HTCC2080] gi|119460704|gb|EAW41796.1| flagellar basal-body rod protein FlgC [marine gamma proteobacterium HTCC2080] Length = 134 Score = 42.2 bits (97), Expect = 0.066, Method: Composition-based stats. Identities = 19/106 (17%), Positives = 39/106 (36%), Gaps = 6/106 (5%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKIS 57 S +I A A R++T+A NM+N ++V F+ F V+ + + +++ Sbjct: 6 SMSIAGTALSAQTTRINTIASNMANANSVSSTAEDTFKARAPIFQAVLEGESDQLGVRVT 65 Query: 58 FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103 + +E E F + D + + +R Sbjct: 66 SIEEVGGEARQEFEPAHPLANEEGFIYKPDIDVTQQMANMMSASRS 111 Score = 39.1 bits (89), Expect = 0.56, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 GF+ + + +M M+ ++ F S +I+ +++ L + Sbjct: 89 GFIYKPDIDVTQQMANMMSASRSFQSAIEVINTSKQLALRTLT 131 >gi|23008564|ref|ZP_00049957.1| COG1558: Flagellar basal body rod protein [Magnetospirillum magnetotacticum MS-1] Length = 118 Score = 42.2 bits (97), Expect = 0.066, Method: Composition-based stats. Identities = 9/47 (19%), Positives = 19/47 (40%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G ++ N N + EM M + + + +I + + I + S Sbjct: 72 GNVKLPNVNMLVEMADMREANRSYEANLQVIKQARAMVASVIDLLKS 118 >gi|53717911|ref|YP_106897.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei K96243] gi|76809258|ref|YP_331876.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei 1710b] gi|134283584|ref|ZP_01770283.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei 305] gi|167717657|ref|ZP_02400893.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei DM98] gi|167736700|ref|ZP_02409474.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei 14] gi|167843905|ref|ZP_02469413.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei B7210] gi|167909124|ref|ZP_02496215.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei 112] gi|254262000|ref|ZP_04953054.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei 1710a] gi|254295811|ref|ZP_04963268.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei 406e] gi|52208325|emb|CAH34258.1| putative flagellar basal-body rod protein [Burkholderia pseudomallei K96243] gi|76578711|gb|ABA48186.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei 1710b] gi|134244993|gb|EBA45088.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei 305] gi|157805665|gb|EDO82835.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei 406e] gi|254220689|gb|EET10073.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei 1710a] Length = 163 Score = 42.2 bits (97), Expect = 0.067, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 27/93 (29%), Gaps = 1/93 (1%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A R ++ N++N DT G+R V FS + + A+ Sbjct: 15 ALDVRAYRQELLSSNIANADTPGYRARDVDFSSTLARALKQDGAASAGNAAQLPLAQPAG 74 Query: 71 GSFISTGTELDFA-LEGDAWFALESPRGIILTR 102 + + A L G+ R Sbjct: 75 VASGMSMATTSGAHLAGNVKLIPTGGPSDDYGR 107 >gi|294675565|ref|YP_003576180.1| flagellar hook-associated protein FlgK [Rhodobacter capsulatus SB 1003] gi|294474385|gb|ADE83773.1| flagellar hook-associated protein FlgK [Rhodobacter capsulatus SB 1003] Length = 484 Score = 42.2 bits (97), Expect = 0.067, Method: Composition-based stats. Identities = 11/51 (21%), Positives = 24/51 (47%), Gaps = 1/51 (1%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGF-RTIKVKFSEVVGAIKNDI 52 ++FN ++ A ++ V+ N++N T G+ R S+ +G + Sbjct: 5 SAFNFAISGLTASSRKAEVVSSNIANAMTEGYARRELSIASQTLGGTGGGV 55 Score = 37.2 bits (84), Expect = 1.9, Method: Composition-based stats. Identities = 17/138 (12%), Positives = 42/138 (30%), Gaps = 11/138 (7%) Query: 112 GSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVR 171 G + + P +S ++ G I T + G Sbjct: 345 GRIRMNAIVDPEQGGSSWHLRDGLMAAAPGAVSDGTILNALSAALTRESAPASGNYGSAL 404 Query: 172 RENSGISPNIPPTPLEDLSGVTVKRGF--------LEDS---NANSMYEMGQMIHLTQKF 220 R SG++ + + +G+ E S ++ YEM ++ + + + Sbjct: 405 RSASGLAAELLSFASSGRQSAELTQGYATARHEALTEMSLADGVDTDYEMQSLLVIEKAY 464 Query: 221 NSITTLIDENEKSMLEAI 238 + ++ + + E + Sbjct: 465 AANAKVVQTIDAMLQELL 482 >gi|326796600|ref|YP_004314420.1| flagellar basal-body rod protein FlgB [Marinomonas mediterranea MMB-1] gi|326547364|gb|ADZ92584.1| flagellar basal-body rod protein FlgB [Marinomonas mediterranea MMB-1] Length = 131 Score = 42.2 bits (97), Expect = 0.068, Method: Composition-based stats. Identities = 11/73 (15%), Positives = 28/73 (38%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIS 75 R S +A+N++N DT ++ + F ++ + +D + + + Sbjct: 20 SARASVLANNIANADTPHYKARDITFDSMLQSEVKCLDLAGNDDQHIDGSSTFGSDDALL 79 Query: 76 TGTELDFALEGDA 88 +L+G+ Sbjct: 80 YRNPSQPSLDGNT 92 >gi|317009731|gb|ADU80311.1| flagellar hook-associated protein FlgK [Helicobacter pylori India7] Length = 606 Score = 42.2 bits (97), Expect = 0.068, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 14/37 (37%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S + EM +I + + +I ++ + + Sbjct: 566 SQVSVDEEMVNLIKFQSGYAANAKVISAIDRMIDTLL 602 Score = 39.5 bits (90), Expect = 0.44, Method: Composition-based stats. Identities = 6/29 (20%), Positives = 11/29 (37%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTD 30 +S N A + + +N+SN Sbjct: 5 LSSLNTSYTGLQAHQNMVDVTGNNISNAS 33 >gi|254516987|ref|ZP_05129045.1| flagellar basal-body rod protein FlgC [gamma proteobacterium NOR5-3] gi|219674492|gb|EED30860.1| flagellar basal-body rod protein FlgC [gamma proteobacterium NOR5-3] Length = 140 Score = 42.2 bits (97), Expect = 0.068, Method: Composition-based stats. Identities = 10/59 (16%), Positives = 23/59 (38%), Gaps = 6/59 (10%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56 + + + A QRL+T++ N++N + V +R F ++ + Sbjct: 6 AIGVAATSLDAQSQRLNTISSNLANANAVSSSAEETYRAQYPVFETMLNDLTTGNGADG 64 Score = 40.2 bits (92), Expect = 0.23, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 20/43 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 GF+ NS+ EM M+ ++ + ++ ++ +L + Sbjct: 95 GFIYRPAINSVEEMANMMEASRSYQDSIEAMNTAKQLILRTLT 137 >gi|119385424|ref|YP_916480.1| flagellar hook-associated protein FlgK [Paracoccus denitrificans PD1222] gi|119375191|gb|ABL70784.1| flagellar hook-associated protein FlgK [Paracoccus denitrificans PD1222] Length = 486 Score = 42.2 bits (97), Expect = 0.068, Method: Composition-based stats. Identities = 7/51 (13%), Positives = 21/51 (41%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 ++ + ++ A + + V+ N++N T G ++ S ++ Sbjct: 5 SAISNAVSGLTAASRGIEIVSSNIANALTPGHARRELDLSSRPSEHGGGVN 55 Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 5/36 (13%), Positives = 14/36 (38%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +S EM ++ L + + + + + +R Sbjct: 449 VDSDKEMESLLALERAYAANAKVFQTANDMLDAILR 484 >gi|46204472|ref|ZP_00049951.2| COG1256: Flagellar hook-associated protein [Magnetospirillum magnetotacticum MS-1] Length = 181 Score = 42.2 bits (97), Expect = 0.068, Method: Composition-based stats. Identities = 7/31 (22%), Positives = 16/31 (51%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGF 34 +F+ A + ++ V+ N++N T G+ Sbjct: 5 AFSTATAGLRVTQAQIGVVSQNIANVGTAGY 35 >gi|261341488|ref|ZP_05969346.1| flagellar hook-associated protein FlgK [Enterobacter cancerogenus ATCC 35316] gi|288316284|gb|EFC55222.1| flagellar hook-associated protein FlgK [Enterobacter cancerogenus ATCC 35316] Length = 456 Score = 42.2 bits (97), Expect = 0.069, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 21/53 (39%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54 NI + A + +S + N+SN T G+ + S VV + + Sbjct: 1 MNMINIAWSGLQAAQFGMSVTSMNISNALTPGYSRQGIIQSSVVTMGQGGMSA 53 >gi|293395580|ref|ZP_06639863.1| flagellar basal-body rod protein FlgB [Serratia odorifera DSM 4582] gi|291421899|gb|EFE95145.1| flagellar basal-body rod protein FlgB [Serratia odorifera DSM 4582] Length = 137 Score = 42.2 bits (97), Expect = 0.069, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 23/65 (35%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR +A N++N DT G++ + F+ + + S VA Sbjct: 15 ALNLRAQRQEILAGNIANADTPGYQARDIDFASQLNKVMAQGRASGSGVALSLTSARHIP 74 Query: 71 GSFIS 75 + Sbjct: 75 AQNLQ 79 >gi|94312675|ref|YP_585884.1| flagellar hook-filament junction protein [Cupriavidus metallidurans CH34] gi|93356527|gb|ABF10615.1| flagellar hook-filament junction protein [Cupriavidus metallidurans CH34] Length = 631 Score = 42.2 bits (97), Expect = 0.069, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 19/51 (37%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 + FNIGL+ + L+T N SN T G+ + G Sbjct: 1 MSLFNIGLSGLNVAQNALTTTGHNFSNAATPGYTRQSTIIASAGGQFTGSG 51 Score = 39.5 bits (90), Expect = 0.40, Method: Composition-based stats. Identities = 5/38 (13%), Positives = 12/38 (31%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S N E ++ Q + + +I + + Sbjct: 592 SGVNMDEETVNLLKFQQLYQANAKVIQTASTIIDTLLS 629 >gi|299068738|emb|CBJ39977.1| flagellar hook-filament junction protein 1 [Ralstonia solanacearum CMR15] Length = 642 Score = 42.2 bits (97), Expect = 0.070, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 26/83 (31%), Gaps = 2/83 (2%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE--VVGAIKNDIDQKISFVA 60 + NIG + L +N+SN T G+ + +E + + Q ++ Sbjct: 4 SLLNIGATGLRVADINLQVTGNNISNASTAGYSRQEAVQTENIPMATGAGYLGQGVNVTT 63 Query: 61 SGKEYLSKEVGSFISTGTELDFA 83 + Y S A Sbjct: 64 VKRIYDQFLTAQVQSGQAASSAA 86 >gi|146307872|ref|YP_001188337.1| flagellar basal body rod protein FlgB [Pseudomonas mendocina ymp] gi|145576073|gb|ABP85605.1| flagellar basal-body rod protein FlgB [Pseudomonas mendocina ymp] Length = 135 Score = 42.2 bits (97), Expect = 0.070, Method: Composition-based stats. Identities = 9/33 (27%), Positives = 18/33 (54%) Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK 49 QR +A+N++N DT ++ + F+ V+ Sbjct: 21 QRAEVLANNIANADTPNYKARDLDFASVLAEQN 53 >gi|297580846|ref|ZP_06942771.1| flagellar basal-body rod protein FlgB [Vibrio cholerae RC385] gi|297534672|gb|EFH73508.1| flagellar basal-body rod protein FlgB [Vibrio cholerae RC385] Length = 131 Score = 42.2 bits (97), Expect = 0.070, Method: Composition-based stats. Identities = 8/38 (21%), Positives = 18/38 (47%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 E+ +A N++ +T GF+ + F + + A + Sbjct: 20 ERNSEVIATNIAQANTPGFKAKGMDFQKALQAASSGAS 57 >gi|94495405|ref|ZP_01301985.1| flagellar hook-associated protein 1 [Sphingomonas sp. SKA58] gi|94424793|gb|EAT09814.1| flagellar hook-associated protein 1 [Sphingomonas sp. SKA58] Length = 445 Score = 42.2 bits (97), Expect = 0.071, Method: Composition-based stats. Identities = 29/241 (12%), Positives = 71/241 (29%), Gaps = 25/241 (10%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M F IG + A ++ +++N++N T G+ V +E S ++ Sbjct: 1 MSDLFIIGSSGTKAYRTAMAAISENIANAGTDGYARRTVTTAE--------SGASTSTMS 52 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + + D L DA T R+ + ++ +S Sbjct: 53 LYIAKANFGGTQVMGVDRASDPYL--DATVRTTGMNLGSATARLRWLTDAETAMNDSSTG 110 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 L + + + +A S + + + + GI+ Sbjct: 111 VGQLMTSMFQNMEKLAASPGDTSLRVTTLDSISRVAQ----SFNQTAADLTNVSDGIATE 166 Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 + ++ N N+ ++ ++ L+D + ++ + N Sbjct: 167 ATASVQTINRSLSALA------NINNS-----LLRAQPGTSAYAQLLDSRDAALQDLSEN 215 Query: 241 I 241 + Sbjct: 216 L 216 >gi|298530646|ref|ZP_07018048.1| flagellar basal-body rod protein FlgB [Desulfonatronospira thiodismutans ASO3-1] gi|298510020|gb|EFI33924.1| flagellar basal-body rod protein FlgB [Desulfonatronospira thiodismutans ASO3-1] Length = 136 Score = 42.2 bits (97), Expect = 0.071, Method: Composition-based stats. Identities = 10/33 (30%), Positives = 20/33 (60%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50 R + V+ N++N T G++ +V+F E + + N Sbjct: 22 RQNVVSSNLANVKTPGYQARRVEFEEQLQSALN 54 >gi|150021010|ref|YP_001306364.1| flagellar basal-body rod protein FlgB [Thermosipho melanesiensis BI429] gi|149793531|gb|ABR30979.1| flagellar basal-body rod protein FlgB [Thermosipho melanesiensis BI429] Length = 127 Score = 42.2 bits (97), Expect = 0.071, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 21/50 (42%), Gaps = 1/50 (2%) Query: 1 MQTS-FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK 49 M S FN A +R + N++N +T ++ + F E+ K Sbjct: 1 MFNSNFNTLKVAMDVALKRQEIHSQNIANAETPNYKRKYIVFEELFNESK 50 >gi|268679766|ref|YP_003304197.1| flagellar hook-associated protein FlgK [Sulfurospirillum deleyianum DSM 6946] gi|268617797|gb|ACZ12162.1| flagellar hook-associated protein FlgK [Sulfurospirillum deleyianum DSM 6946] Length = 614 Score = 42.2 bits (97), Expect = 0.072, Method: Composition-based stats. Identities = 9/70 (12%), Positives = 22/70 (31%) Query: 169 FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228 + S S D +V + S N E+ +I +++ +I Sbjct: 541 LTTKIGSDASTANSNYDTNDALYSSVYTQYQSVSGVNKDEELANLIQYQSSYSAAAKIIT 600 Query: 229 ENEKSMLEAI 238 ++ + + Sbjct: 601 TIDQMLETLL 610 Score = 41.8 bits (96), Expect = 0.088, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 34/82 (41%), Gaps = 2/82 (2%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV--KFSEVVGAIKNDIDQKISFVA 60 ++ N G +A A + ++T + N++N D + +V S+ + I +S + Sbjct: 5 STLNTGTSALNAAQVAVATTSQNIANVDNPYYTRQRVTLSASDALNTKGVSIGTGVSITS 64 Query: 61 SGKEYLSKEVGSFISTGTELDF 82 + + ++ T L + Sbjct: 65 IVRIHDEFVFSKLRTSSTSLAY 86 >gi|167579485|ref|ZP_02372359.1| flagellar basal body rod protein FlgB [Burkholderia thailandensis TXDOH] Length = 163 Score = 42.2 bits (97), Expect = 0.072, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 27/93 (29%), Gaps = 1/93 (1%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A R ++ N++N DT G+R V FS + + A+ Sbjct: 15 ALDVRAYRQELLSSNIANADTPGYRARDVDFSSTLARALKQDGAASAGNAAALPLAQPAG 74 Query: 71 GSFISTGTELDFA-LEGDAWFALESPRGIILTR 102 + + A L G+ R Sbjct: 75 VTSGMSMATTSSAHLAGNVKLIPTGGPSDDYGR 107 >gi|163850060|ref|YP_001638103.1| flagellar basal body rod protein FlgB [Methylobacterium extorquens PA1] gi|218528663|ref|YP_002419479.1| flagellar basal body rod protein FlgB [Methylobacterium chloromethanicum CM4] gi|240137194|ref|YP_002961663.1| Flagellar basal-body rod protein flgB [Methylobacterium extorquens AM1] gi|254559206|ref|YP_003066301.1| flagellar basal-body rod protein flgB [Methylobacterium extorquens DM4] gi|163661665|gb|ABY29032.1| flagellar basal body rod protein [Methylobacterium extorquens PA1] gi|218520966|gb|ACK81551.1| flagellar basal body rod protein [Methylobacterium chloromethanicum CM4] gi|240007160|gb|ACS38386.1| Flagellar basal-body rod protein flgB [Methylobacterium extorquens AM1] gi|254266484|emb|CAX22248.1| Flagellar basal-body rod protein flgB [Methylobacterium extorquens DM4] Length = 129 Score = 42.2 bits (97), Expect = 0.072, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 23/43 (53%), Gaps = 1/43 (2%) Query: 15 LEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIKNDIDQKI 56 L R +T+A N++N +T G++ V F++V+ D+ Sbjct: 18 LATRQATIAGNVANANTPGYKARDVMPFAQVLARTGLDMASTA 60 >gi|315281375|ref|ZP_07870012.1| flagellar basal-body rod protein FlgB [Listeria marthii FSL S4-120] gi|313614972|gb|EFR88479.1| flagellar basal-body rod protein FlgB [Listeria marthii FSL S4-120] Length = 133 Score = 42.2 bits (97), Expect = 0.073, Method: Composition-based stats. Identities = 12/104 (11%), Positives = 29/104 (27%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 L+ V+ N++N +T F+ + F E GA Q + + + Sbjct: 12 LNYLQTANQVVSSNIANANTPNFKASEASFEESFGASLRASGQSSTESTGNLTKTNTKHL 71 Query: 72 SFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLV 115 + +T + + + + + Sbjct: 72 AGTNTDETNAKITTKSGSINEDGNNVNVTSEMISLTKNNQMYAL 115 >gi|294013084|ref|YP_003546544.1| flagellar basal-body rod protein FlgC [Sphingobium japonicum UT26S] gi|292676414|dbj|BAI97932.1| flagellar basal-body rod protein FlgC [Sphingobium japonicum UT26S] Length = 138 Score = 42.2 bits (97), Expect = 0.073, Method: Composition-based stats. Identities = 8/36 (22%), Positives = 18/36 (50%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +S E+ MI + + + +++ + M+E IR Sbjct: 100 VDSSAELVDMIETARMYQNNVQVLNTAKSLMMETIR 135 Score = 35.2 bits (79), Expect = 7.1, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 30/87 (34%), Gaps = 6/87 (6%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSEVVGAIKNDIDQK 55 F+I A A RL+ A NM+N + G +R IK F V + + Sbjct: 9 MNVFDIAGRAMSAQLVRLNATASNMANAGNVTGSAAEAYRAIKPVFQSVTDSPGVSTVKV 68 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDF 82 + V + + + + D Sbjct: 69 QNVVTTNAQPTKRHDPNHPLADKNGDV 95 >gi|315125982|ref|YP_004067985.1| LfgC [Pseudoalteromonas sp. SM9913] gi|315014496|gb|ADT67834.1| LfgC [Pseudoalteromonas sp. SM9913] Length = 138 Score = 42.2 bits (97), Expect = 0.074, Method: Composition-based stats. Identities = 10/46 (21%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G++ SN N++ EM M+ ++ + + ++ SM ++I + Sbjct: 93 GYVFYSNVNALEEMADMMSASRSYQTSVEVMGRVN-SMQQSILKLG 137 Score = 41.4 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 7/56 (12%) Query: 3 TSFNIGL-AAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKND 51 S +A A RL T+A N++N DT ++ +K FS + ++ Sbjct: 4 NSIYDASGSAMRAQVIRLDTIASNLANADTAAGSEADAYKALKPVFSALYKQTQDS 59 >gi|288960379|ref|YP_003450719.1| flagellar basal-body rod protein [Azospirillum sp. B510] gi|288912687|dbj|BAI74175.1| flagellar basal-body rod protein [Azospirillum sp. B510] Length = 134 Score = 42.2 bits (97), Expect = 0.074, Method: Composition-based stats. Identities = 4/43 (9%), Positives = 15/43 (34%) Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G + N + E + + + + ++ ++ M + Sbjct: 88 SGMVAAPNVDLATERITQMAANRAYGANVAVVRTQDEMMKSLL 130 >gi|254785368|ref|YP_003072797.1| flagellar basal-body rod protein FlgB [Teredinibacter turnerae T7901] gi|237687018|gb|ACR14282.1| flagellar basal-body rod protein FlgB [Teredinibacter turnerae T7901] Length = 134 Score = 42.2 bits (97), Expect = 0.074, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 26/64 (40%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + + I +A +R +A N++NTDT G++ F E + + S + Sbjct: 6 EKALGIHESAMRLRGERAGMLASNLANTDTPGYKARDFNFQEALDRQMTGRNGDFSLQTT 65 Query: 62 GKEY 65 + Sbjct: 66 QHAH 69 >gi|220904842|ref|YP_002480154.1| flagellar basal body rod protein FlgB [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869141|gb|ACL49476.1| flagellar basal-body rod protein FlgB [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 137 Score = 42.2 bits (97), Expect = 0.074, Method: Composition-based stats. Identities = 10/67 (14%), Positives = 22/67 (32%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 R + +A N++N DT ++ ++ F + + + S + S Sbjct: 16 MNMQLDRQNIIAGNLANIDTPNYKPRELSFEKELQTALGQDMEGQMSRTSAEHIPSTFDP 75 Query: 72 SFISTGT 78 S Sbjct: 76 SSFRPEW 82 >gi|242278417|ref|YP_002990546.1| flagellar hook-associated protein FlgK [Desulfovibrio salexigens DSM 2638] gi|242121311|gb|ACS79007.1| flagellar hook-associated protein FlgK [Desulfovibrio salexigens DSM 2638] Length = 583 Score = 42.2 bits (97), Expect = 0.074, Method: Composition-based stats. Identities = 12/73 (16%), Positives = 31/73 (42%), Gaps = 2/73 (2%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV--VGAIKNDIDQKISFVA 60 + +IG A + ++T ++N++N++T G++ + + + + N + VA Sbjct: 5 NTLSIGQRALANAQVSINTTSNNIANSETEGYQRADAVYDSLGNINSYGNSLGTGADIVA 64 Query: 61 SGKEYLSKEVGSF 73 + F Sbjct: 65 IRANWDRFIEKQF 77 Score = 36.8 bits (83), Expect = 3.0, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 13/37 (35%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N E+ + Q++ + +I + + Sbjct: 544 SGVNVDEELVNLTRHQQQYEAACQIISVTRDMIDTVL 580 >gi|255521665|ref|ZP_05388902.1| flagellar hook-associated protein FlgK [Listeria monocytogenes FSL J1-175] Length = 357 Score = 41.8 bits (96), Expect = 0.074, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 18/42 (42%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46 FN L+ A + N+SN +T G+ V + V G Sbjct: 6 FNTSLSGMSAAQIANMVAQQNISNMNTPGYIRQAVDQTAVYG 47 >gi|157147096|ref|YP_001454415.1| flagellar hook-associated protein FlgK [Citrobacter koseri ATCC BAA-895] gi|157084301|gb|ABV13979.1| hypothetical protein CKO_02873 [Citrobacter koseri ATCC BAA-895] Length = 461 Score = 41.8 bits (96), Expect = 0.074, Method: Composition-based stats. Identities = 10/82 (12%), Positives = 23/82 (28%), Gaps = 1/82 (1%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + NI + A + ++ + N++N T G+ + +G + + V Sbjct: 1 MSMINIAFSGLQAAQVGMNVTSMNIANLLTPGYSRQGII-QSSIGPMGEAGFTAGNGVQV 59 Query: 62 GKEYLSKEVGSFISTGTELDFA 83 A Sbjct: 60 DSIRRISSQYLVNQVWQTNSKA 81 >gi|114570487|ref|YP_757167.1| flagellar basal body rod protein FlgC [Maricaulis maris MCS10] gi|114340949|gb|ABI66229.1| flagellar basal-body rod protein FlgC [Maricaulis maris MCS10] Length = 137 Score = 41.8 bits (96), Expect = 0.076, Method: Composition-based stats. Identities = 8/46 (17%), Positives = 21/46 (45%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G+++ SN ++ EM M + + + +I+ + A+ + Sbjct: 91 GYVQYSNVQTLVEMMDMREAMRSYEANLNMIENARRMQERALDLLR 136 Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 12/104 (11%), Positives = 27/104 (25%), Gaps = 8/104 (7%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFS-EVVGAIKNDIDQKI 56 I A R+ +++N++N D+ +R F E+ A + + Sbjct: 8 MQISAFGMRAQAARMRIISENIANADSTAREAGGDPYRRQVPVFEAELDRATGLNAVRMT 67 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL 100 E+ + + E + Sbjct: 68 DVAHDQSEFTLEYDPGHPAANAEGYVQYSNVQTLVEMMDMREAM 111 >gi|329297213|ref|ZP_08254549.1| flagellar basal body rod protein FlgB [Plautia stali symbiont] Length = 137 Score = 41.8 bits (96), Expect = 0.076, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 26/75 (34%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + G A QR +A N++N DT G++ + F+ + + + S +A Sbjct: 6 DAALRFGTEALNLRAQRQEILASNIANADTPGYQARDIDFASQLSKAMQNGRAEGSSLAL 65 Query: 62 GKEYLSKEVGSFIST 76 S Sbjct: 66 NVTSSRHIEAQTNSQ 80 >gi|209521586|ref|ZP_03270284.1| flagellar basal-body rod protein FlgB [Burkholderia sp. H160] gi|209497969|gb|EDZ98126.1| flagellar basal-body rod protein FlgB [Burkholderia sp. H160] Length = 165 Score = 41.8 bits (96), Expect = 0.076, Method: Composition-based stats. Identities = 8/51 (15%), Positives = 19/51 (37%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 A R ++ N++N DT G++ + F+ + + + Sbjct: 15 AMDVRAYRQELLSSNIANADTPGYKARDIDFASSLAGALKKTGGSTAGQGT 65 >gi|117621121|ref|YP_857337.1| flagellar hook-associated protein FlgK [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117562528|gb|ABK39476.1| flagellar hook-associated protein FlgK [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 666 Score = 41.8 bits (96), Expect = 0.076, Method: Composition-based stats. Identities = 9/50 (18%), Positives = 23/50 (46%), Gaps = 4/50 (8%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54 IG + +A ++ L T ++N+ N ++ G+ + ++ N + Sbjct: 6 LGIGTSGVMAQQRLLQTTSNNIVNVNSQGYVRERT----LIYTNANGLGT 51 >gi|32474824|ref|NP_867818.1| flagellar basal-body rod potein FlgC [Rhodopirellula baltica SH 1] gi|32445364|emb|CAD75365.1| flagellar basal-body rod potein FlgC [Rhodopirellula baltica SH 1] gi|327539962|gb|EGF26561.1| flagellar basal-body rod protein FlgC [Rhodopirellula baltica WH47] Length = 143 Score = 41.8 bits (96), Expect = 0.076, Method: Composition-based stats. Identities = 8/30 (26%), Positives = 18/30 (60%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTD 30 M ++ +I +A +A RL+ ++ N++N Sbjct: 5 MISALDISTSALVAQRTRLNAISGNIANIS 34 Score = 41.4 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 6/46 (13%), Positives = 21/46 (45%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G++ N + +M + T+ + + +I+ ++ + + +A Sbjct: 98 GYVAYPNIDLTTQMVDALESTRAYEANVGVIEISKGMSRQRLAILA 143 >gi|260574406|ref|ZP_05842410.1| flagellar basal body rod protein [Rhodobacter sp. SW2] gi|259023302|gb|EEW26594.1| flagellar basal body rod protein [Rhodobacter sp. SW2] Length = 126 Score = 41.8 bits (96), Expect = 0.077, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 1/42 (2%) Query: 18 RLSTVADNMSNTDTVGFRT-IKVKFSEVVGAIKNDIDQKISF 58 R +A N++N DT GF+ F+E A + + Sbjct: 21 RQEVIARNVANADTPGFKAQDLPDFAETYQAGEGAMRATRPG 62 >gi|149178731|ref|ZP_01857314.1| flagellar basal-body rod potein FlgC [Planctomyces maris DSM 8797] gi|148842429|gb|EDL56809.1| flagellar basal-body rod potein FlgC [Planctomyces maris DSM 8797] Length = 137 Score = 41.8 bits (96), Expect = 0.077, Method: Composition-based stats. Identities = 6/48 (12%), Positives = 21/48 (43%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 + G + N + + E + + + + + +D ++ ++R +A Sbjct: 90 QDGNVTYPNIDLVTEFVNALEAGRAYEANISALDITKEMFSTSLRILA 137 Score = 41.0 bits (94), Expect = 0.14, Method: Composition-based stats. Identities = 9/30 (30%), Positives = 18/30 (60%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTD 30 M +I +A +A QR++T+A N++ + Sbjct: 1 MLKGIDISTSALVAQRQRMNTIAGNIAAVN 30 >gi|259907631|ref|YP_002647987.1| Flagellar basal-body rod protein FlgB [Erwinia pyrifoliae Ep1/96] gi|224963253|emb|CAX54737.1| Flagellar basal-body rod protein FlgB [Erwinia pyrifoliae Ep1/96] gi|283477473|emb|CAY73389.1| Flagellar basal-body rod protein flgB [Erwinia pyrifoliae DSM 12163] Length = 135 Score = 41.8 bits (96), Expect = 0.078, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 23/50 (46%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 A L +R +A N++N DT G+ + FS+ + + S V+ Sbjct: 15 ALSLLSRRQEVLASNIANADTPGYMARDIDFSQQLKNTLANQSMAKSPVS 64 >gi|239815253|ref|YP_002944163.1| flagellar basal body protein [Variovorax paradoxus S110] gi|239801830|gb|ACS18897.1| flagellar basal body protein [Variovorax paradoxus S110] Length = 127 Score = 41.8 bits (96), Expect = 0.079, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 22/49 (44%) Query: 9 LAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS 57 A A R +A N++N + VG+ +V F + + ++ + Q Sbjct: 14 AMALDAASLRQQAIATNIANANAVGYVPQRVSFEDQLADARSTLAQSGR 62 >gi|254457451|ref|ZP_05070879.1| flagellar hook-associated protein FlgK [Campylobacterales bacterium GD 1] gi|207086243|gb|EDZ63527.1| flagellar hook-associated protein FlgK [Campylobacterales bacterium GD 1] Length = 626 Score = 41.8 bits (96), Expect = 0.079, Method: Composition-based stats. Identities = 6/37 (16%), Positives = 14/37 (37%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S + EM +I + + +I ++ M + Sbjct: 586 SKVSLDEEMTNLIKYQTSYGAAAKIITTIDQMMQTLL 622 Score = 39.1 bits (89), Expect = 0.59, Method: Composition-based stats. Identities = 8/82 (9%), Positives = 29/82 (35%), Gaps = 2/82 (2%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV--VGAIKNDIDQKISFVA 60 + +IG + + ++T N+SN + G+ +V + + ++ + Sbjct: 6 NALHIGYSGLNVAQIGINTTGHNISNAEVDGYTRQRVITAAATPLQTYPGNVGNGAQVMD 65 Query: 61 SGKEYLSKEVGSFISTGTELDF 82 + + + + ++ Sbjct: 66 IKRVFDNFVFDRYTDISETKEY 87 >gi|13472593|ref|NP_104160.1| flagellar hook-associated protein FlgK [Mesorhizobium loti MAFF303099] gi|14023339|dbj|BAB49946.1| flagellar hook-associated protein 1; FlgK [Mesorhizobium loti MAFF303099] Length = 484 Score = 41.8 bits (96), Expect = 0.079, Method: Composition-based stats. Identities = 10/144 (6%), Positives = 32/144 (22%), Gaps = 4/144 (2%) Query: 103 DGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYS 162 + + G+ + + + G+ + Sbjct: 341 NAAMDPSAGGNPTLLRDGGANGAAYVANTTGGPSYSSLLIAYGDRLDKPMTFDPAAGISA 400 Query: 163 VDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLED-SN---ANSMYEMGQMIHLTQ 218 + + + + + E SN N EM M+ L Sbjct: 401 TSSVSDYAANSIGWLQSMRQQASTAADAKEALAQRSSEALSNATGVNVDQEMSLMLDLEH 460 Query: 219 KFNSITTLIDENEKSMLEAIRNIA 242 + + ++ + + + + Sbjct: 461 TYQASARMMKTVDDMLTALLNAVG 484 >gi|153213631|ref|ZP_01948904.1| flagellar basal-body rod protein FlgB [Vibrio cholerae 1587] gi|153825327|ref|ZP_01977994.1| flagellar basal-body rod protein FlgB [Vibrio cholerae MZO-2] gi|153829345|ref|ZP_01982012.1| flagellar basal-body rod protein FlgB [Vibrio cholerae 623-39] gi|229513844|ref|ZP_04403306.1| flagellar basal-body rod protein FlgB [Vibrio cholerae TMA 21] gi|229522149|ref|ZP_04411566.1| flagellar basal-body rod protein FlgB [Vibrio cholerae TM 11079-80] gi|229524195|ref|ZP_04413600.1| flagellar basal-body rod protein FlgB [Vibrio cholerae bv. albensis VL426] gi|229528795|ref|ZP_04418185.1| flagellar basal-body rod protein FlgB [Vibrio cholerae 12129(1)] gi|254286491|ref|ZP_04961448.1| flagellar basal-body rod protein FlgB [Vibrio cholerae AM-19226] gi|262191692|ref|ZP_06049868.1| flagellar basal-body rod protein FlgB [Vibrio cholerae CT 5369-93] gi|124115830|gb|EAY34650.1| flagellar basal-body rod protein FlgB [Vibrio cholerae 1587] gi|148875186|gb|EDL73321.1| flagellar basal-body rod protein FlgB [Vibrio cholerae 623-39] gi|149741011|gb|EDM55080.1| flagellar basal-body rod protein FlgB [Vibrio cholerae MZO-2] gi|150423440|gb|EDN15384.1| flagellar basal-body rod protein FlgB [Vibrio cholerae AM-19226] gi|229332569|gb|EEN98055.1| flagellar basal-body rod protein FlgB [Vibrio cholerae 12129(1)] gi|229337776|gb|EEO02793.1| flagellar basal-body rod protein FlgB [Vibrio cholerae bv. albensis VL426] gi|229341074|gb|EEO06079.1| flagellar basal-body rod protein FlgB [Vibrio cholerae TM 11079-80] gi|229349025|gb|EEO13982.1| flagellar basal-body rod protein FlgB [Vibrio cholerae TMA 21] gi|262032431|gb|EEY50993.1| flagellar basal-body rod protein FlgB [Vibrio cholerae CT 5369-93] gi|327484719|gb|AEA79126.1| Flagellar basal-body rod protein FlgB [Vibrio cholerae LMA3894-4] Length = 131 Score = 41.8 bits (96), Expect = 0.079, Method: Composition-based stats. Identities = 8/38 (21%), Positives = 18/38 (47%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 E+ +A N++ +T GF+ + F + + A + Sbjct: 20 ERNSEVIATNIAQANTPGFKAKGMDFQKALQAASSGAS 57 >gi|187925754|ref|YP_001897396.1| flagellar hook-associated protein FlgK [Burkholderia phytofirmans PsJN] gi|187716948|gb|ACD18172.1| flagellar hook-associated protein FlgK [Burkholderia phytofirmans PsJN] Length = 657 Score = 41.8 bits (96), Expect = 0.080, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 24/70 (34%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M N+GL+ A + L+T N+SN T G+ ++E G Sbjct: 1 MSNLINLGLSGLNAAQWGLTTTGQNISNASTPGYTIETPVYAESGGQYTGSGYLPQGVST 60 Query: 61 SGKEYLSKEV 70 + + Sbjct: 61 TTVTRQYSQY 70 Score = 35.6 bits (80), Expect = 5.8, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 13/37 (35%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N E ++ Q + + + +I + + Sbjct: 617 SGVNINEEAANLLQYQQLYQANSKVIQTAQTLFQTIL 653 >gi|52080220|ref|YP_079011.1| flagellar basal body rod protein FlgB [Bacillus licheniformis ATCC 14580] gi|52785597|ref|YP_091426.1| flagellar basal body rod protein FlgB [Bacillus licheniformis ATCC 14580] gi|319646001|ref|ZP_08000231.1| FlgB protein [Bacillus sp. BT1B_CT2] gi|52003431|gb|AAU23373.1| flagellar basal-body rod protein [Bacillus licheniformis ATCC 14580] gi|52348099|gb|AAU40733.1| FlgB [Bacillus licheniformis ATCC 14580] gi|317391751|gb|EFV72548.1| FlgB protein [Bacillus sp. BT1B_CT2] Length = 129 Score = 41.8 bits (96), Expect = 0.080, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 20/44 (45%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54 A + + +N++N DT ++ KV F V+ + I+ Sbjct: 14 ALNQANIKQKVITNNLANVDTPNYKAKKVSFKNVLNEESSRINA 57 >gi|304321121|ref|YP_003854764.1| flagellar hook-associated protein [Parvularcula bermudensis HTCC2503] gi|303300023|gb|ADM09622.1| flagellar hook-associated protein [Parvularcula bermudensis HTCC2503] Length = 481 Score = 41.8 bits (96), Expect = 0.080, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 28/82 (34%), Gaps = 1/82 (1%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGF-RTIKVKFSEVVGAIKNDIDQKISFVAS 61 ++ +I + A R T A N++N G+ R V VVG+ + + + Sbjct: 5 SALSIANSGLAAASIRAQTTASNIANATVEGYSRRDVVLSERVVGSTGIGVSVVGTERVT 64 Query: 62 GKEYLSKEVGSFISTGTELDFA 83 S + + A Sbjct: 65 SPVLTSTRIRLEAADSFATQTA 86 Score = 35.6 bits (80), Expect = 5.4, Method: Composition-based stats. Identities = 14/132 (10%), Positives = 34/132 (25%), Gaps = 14/132 (10%) Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 D +I G Q ++I G + S + Sbjct: 348 VDPDEGGELYRIQAGIGATAPAPSGNGDQLNRLIDAFGAERAAPPALGINGNASAVDLVA 407 Query: 182 PPTPLEDLSGVTVKRGFLEDSN--------------ANSMYEMGQMIHLTQKFNSITTLI 227 + + L S ++ E+ Q++ + Q + + +I Sbjct: 408 EVNAAVTEADAEAQDDALYASTRAQLAREEEQAIIGVDTDRELQQLLLIEQAYGANARVI 467 Query: 228 DENEKSMLEAIR 239 ++ + +R Sbjct: 468 QTIDEMLDILMR 479 >gi|322379368|ref|ZP_08053739.1| flagellar basal body rod protein FlgB [Helicobacter suis HS1] gi|322380861|ref|ZP_08054951.1| flagellar basal body rod protein FlgB [Helicobacter suis HS5] gi|321146712|gb|EFX41522.1| flagellar basal body rod protein FlgB [Helicobacter suis HS5] gi|321148186|gb|EFX42715.1| flagellar basal body rod protein FlgB [Helicobacter suis HS1] Length = 140 Score = 41.8 bits (96), Expect = 0.081, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 19/45 (42%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK 55 A R +A N++N DT +R V F ++ K ++ Sbjct: 13 AMDYRSLRQDLIASNIANVDTPFYRPRDVDFETMLAHKKAEVFDH 57 >gi|228958023|ref|ZP_04119759.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar pakistani str. T13001] gi|228801648|gb|EEM48529.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar pakistani str. T13001] Length = 166 Score = 41.8 bits (96), Expect = 0.081, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 29/72 (40%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 L + +TV+ N++N +T G++ V F+E + + + S + Sbjct: 43 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNEM 102 Query: 72 SFISTGTELDFA 83 + T+ +A Sbjct: 103 HLPTVNTKNTYA 114 >gi|78776765|ref|YP_393080.1| flagellar hook-associated protein FlgK [Sulfurimonas denitrificans DSM 1251] gi|78497305|gb|ABB43845.1| Flagellar hook-associated protein [Sulfurimonas denitrificans DSM 1251] Length = 628 Score = 41.8 bits (96), Expect = 0.081, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 15/37 (40%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S + E+ +I + + + +I ++ M + Sbjct: 588 SKVSIDEELTNLIKYQTSYGAASKIITTIDQMMQTLL 624 Score = 38.3 bits (87), Expect = 0.98, Method: Composition-based stats. Identities = 13/85 (15%), Positives = 31/85 (36%), Gaps = 5/85 (5%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE-----VVGAIKNDIDQKIS 57 S +IG + A + +ST + N++N ++ G+ +V + + + Q + Sbjct: 7 NSLSIGYSGLSAAQAGVSTTSHNITNAESEGYTRQRVVTAAATPVNMAPGNVGNGTQIMD 66 Query: 58 FVASGKEYLSKEVGSFISTGTELDF 82 ++ + DF Sbjct: 67 IARIFDNFVYDRYTGISAEKEYSDF 91 >gi|262396037|ref|YP_003287890.1| flagellar basal-body rod protein FlgC [Vibrio sp. Ex25] gi|262339631|gb|ACY53425.1| flagellar basal-body rod protein FlgC [Vibrio sp. Ex25] Length = 131 Score = 41.8 bits (96), Expect = 0.081, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 19/43 (44%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ + + + EM M+ T+ F + ++ + +R Sbjct: 84 GYVYYPDIDVVAEMADMMSATRSFETNVEVLSNVKSMQQGLLR 126 >gi|254516986|ref|ZP_05129044.1| flagellar basal-body rod protein FlgB [gamma proteobacterium NOR5-3] gi|219674491|gb|EED30859.1| flagellar basal-body rod protein FlgB [gamma proteobacterium NOR5-3] Length = 135 Score = 41.8 bits (96), Expect = 0.081, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 28/78 (35%), Gaps = 2/78 (2%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A A + L +A N++N+DT G++ + FS + + A+ Sbjct: 21 ALRAQKTEL--LAANIANSDTPGYKARDIDFSAAMANASGAQEALTRTHAAHLSTSGTPG 78 Query: 71 GSFISTGTELDFALEGDA 88 +L+G+ Sbjct: 79 NVEPMYRVPTQPSLDGNT 96 >gi|304392492|ref|ZP_07374432.1| flagellar hook-associated protein FlgK [Ahrensia sp. R2A130] gi|303295122|gb|EFL89482.1| flagellar hook-associated protein FlgK [Ahrensia sp. R2A130] Length = 481 Score = 41.8 bits (96), Expect = 0.083, Method: Composition-based stats. Identities = 7/44 (15%), Positives = 19/44 (43%), Gaps = 3/44 (6%) Query: 202 SN---ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 SN N EM +++ L + + + ++ ++ + +I Sbjct: 438 SNEGGVNIDEEMTRLLQLERAYEASARIVSTVDRLFDTLLASIR 481 >gi|317047688|ref|YP_004115336.1| flagellar basal-body rod protein FlgB [Pantoea sp. At-9b] gi|316949305|gb|ADU68780.1| flagellar basal-body rod protein FlgB [Pantoea sp. At-9b] Length = 137 Score = 41.8 bits (96), Expect = 0.083, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 28/78 (35%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + G A +R +A N++N DT G++ + F+ + + + + S +A Sbjct: 6 DAALRFGTEALNLRAERQEILASNIANADTPGYQARDIDFASQLSKVMENGRSEGSSLAL 65 Query: 62 GKEYLSKEVGSFISTGTE 79 S + Sbjct: 66 NVTSARHIEAQTNSQPSM 83 >gi|296157449|ref|ZP_06840284.1| flagellar hook-associated protein FlgK [Burkholderia sp. Ch1-1] gi|295892221|gb|EFG72004.1| flagellar hook-associated protein FlgK [Burkholderia sp. Ch1-1] Length = 657 Score = 41.8 bits (96), Expect = 0.083, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 24/70 (34%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M N+GL+ A + L+T N+SN T G+ ++E G Sbjct: 1 MSNLINLGLSGLNAAQWGLTTTGQNISNASTPGYTIENPVYAESGGQYTGSGYLPQGVST 60 Query: 61 SGKEYLSKEV 70 + + Sbjct: 61 TTVTRQYSQY 70 Score = 35.6 bits (80), Expect = 6.1, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 13/37 (35%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N E ++ Q + + + +I + + Sbjct: 617 SGVNINEEAANLLQYQQLYQANSKVIQTAQTLFQTIL 653 >gi|295096228|emb|CBK85318.1| flagellar basal-body rod protein FlgB [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 138 Score = 41.8 bits (96), Expect = 0.083, Method: Composition-based stats. Identities = 12/66 (18%), Positives = 25/66 (37%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR +A N++N DT G++ + FS + + + + V+ Sbjct: 15 ALNLRAQRQEILAANIANADTPGYQARDIDFSSELKKVMERGRAEGTGVSLALTSSRHIP 74 Query: 71 GSFIST 76 ++ Sbjct: 75 AQAMTA 80 >gi|270487671|ref|ZP_06204745.1| conserved domain protein [Yersinia pestis KIM D27] gi|270336175|gb|EFA46952.1| conserved domain protein [Yersinia pestis KIM D27] Length = 50 Score = 41.8 bits (96), Expect = 0.083, Method: Composition-based stats. Identities = 10/37 (27%), Positives = 19/37 (51%) Query: 199 LEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 LE SN +++ EM I L+++F + ++ E Sbjct: 5 LESSNVSAISEMIASISLSRQFEAQIKMMKVAEDLAQ 41 >gi|237799215|ref|ZP_04587676.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022070|gb|EGI02127.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv. oryzae str. 1_6] Length = 192 Score = 41.8 bits (96), Expect = 0.083, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 35/97 (36%), Gaps = 1/97 (1%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + +IGL+ A ++T+ +N +N DT G+ +V S I + Sbjct: 1 MSLISIGLSGINASSAAINTIGNNTANVDTAGYSRQQVL-STASAQIALGQGVGYLGTGT 59 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98 + + S++ T + AL DA Sbjct: 60 TLSDVRRIYNSYLDTQLQSSTALSADAVAYSGQAGKT 96 >gi|84388097|ref|ZP_00990993.1| flagellar hook-associated protein [Vibrio splendidus 12B01] gi|84377164|gb|EAP94034.1| flagellar hook-associated protein [Vibrio splendidus 12B01] Length = 626 Score = 41.8 bits (96), Expect = 0.083, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 32/85 (37%), Gaps = 2/85 (2%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 N+G + L +++L+T N+SN +T G+ V V + V Sbjct: 6 LNVGAQSVLTAQRQLNTTGHNISNANTEGYSRQSVI-QGVNDPRQYGGQSYGMGVHVENV 64 Query: 65 YLSKEVGSFISTG-TELDFALEGDA 88 S + + + + A +GD Sbjct: 65 RRSWDQFAVKELNLSTTNAANKGDT 89 Score = 36.8 bits (83), Expect = 2.5, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 13/37 (35%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N E M+ Q + + + ++ + + Sbjct: 587 SGVNLDEEAANMMKFQQAYMASSRIMQAANDTFNTIL 623 >gi|220924393|ref|YP_002499695.1| flagellar basal body rod protein [Methylobacterium nodulans ORS 2060] gi|219949000|gb|ACL59392.1| flagellar basal body rod protein [Methylobacterium nodulans ORS 2060] Length = 119 Score = 41.8 bits (96), Expect = 0.084, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 23/70 (32%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 L R +TVA N++N DT G+R V + + A + Sbjct: 14 AQHLSARQATVAGNIANADTPGYRARDVVPFRPIPVCVGPPSRLRFGRAVSPARRATGRP 73 Query: 72 SFISTGTELD 81 + E D Sbjct: 74 AGAGPPWEGD 83 >gi|146311252|ref|YP_001176326.1| flagellar hook-associated protein FlgK [Enterobacter sp. 638] gi|145318128|gb|ABP60275.1| flagellar hook-associated protein FlgK [Enterobacter sp. 638] Length = 546 Score = 41.8 bits (96), Expect = 0.084, Method: Composition-based stats. Identities = 9/52 (17%), Positives = 21/52 (40%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+TV++N+S+ + G+ + Sbjct: 1 MSSLINSAMSGLSAAQASLNTVSNNISSYNVAGYTRQTTVLGAANSTLTGGG 52 >gi|228964726|ref|ZP_04125833.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar sotto str. T04001] gi|228794976|gb|EEM42475.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar sotto str. T04001] Length = 152 Score = 41.8 bits (96), Expect = 0.085, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 29/72 (40%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 L + +TV+ N++N +T G++ V F+E + + + S + Sbjct: 29 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNEM 88 Query: 72 SFISTGTELDFA 83 + T+ +A Sbjct: 89 HLPTVNTKNTYA 100 >gi|325109010|ref|YP_004270078.1| flagellar basal-body rod protein FlgC [Planctomyces brasiliensis DSM 5305] gi|324969278|gb|ADY60056.1| flagellar basal-body rod protein FlgC [Planctomyces brasiliensis DSM 5305] Length = 133 Score = 41.8 bits (96), Expect = 0.086, Method: Composition-based stats. Identities = 17/107 (15%), Positives = 31/107 (28%), Gaps = 8/107 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G----FRTIKVKFSEVVGAIKNDI 52 M + +I + +A QRL+T+A+N++N T G F+ V F+ + + Sbjct: 1 MFRTIDIITSGLVAQRQRLNTIAENVANQQTTRDAEGNVSPFQRRFVTFAADSDSTEAAG 60 Query: 53 DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 + E A Sbjct: 61 VKFEVEKDDQTPPRLVYEPGHPDANAEGYVAYPAINMVTEFVNAMEA 107 Score = 37.2 bits (84), Expect = 1.9, Method: Composition-based stats. Identities = 6/45 (13%), Positives = 17/45 (37%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 G++ N + E + ++ + + +K A+R + Sbjct: 88 GYVAYPAINMVTEFVNAMEASRAYEANVVSFSTTQKIGEMALRIL 132 >gi|294635607|ref|ZP_06714084.1| flagellar basal-body rod protein FlgB [Edwardsiella tarda ATCC 23685] gi|291091059|gb|EFE23620.1| flagellar basal-body rod protein FlgB [Edwardsiella tarda ATCC 23685] Length = 137 Score = 41.8 bits (96), Expect = 0.086, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 23/65 (35%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR +A N++N DT G++ + F+ + I S +A Sbjct: 15 ALNLRAQRQEILAANIANADTPGYQARDIDFASQLSRILEQGRPDGSSMALSLTSARHIP 74 Query: 71 GSFIS 75 + Sbjct: 75 AQTVQ 79 >gi|116619479|ref|YP_821635.1| flagellar basal-body rod protein FlgC [Candidatus Solibacter usitatus Ellin6076] gi|116222641|gb|ABJ81350.1| flagellar basal-body rod protein FlgC [Candidatus Solibacter usitatus Ellin6076] Length = 144 Score = 41.8 bits (96), Expect = 0.087, Method: Composition-based stats. Identities = 5/42 (11%), Positives = 18/42 (42%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ N+ +M ++ ++ F + + + + +I Sbjct: 99 GYVAFPKINTAEDMVDLMGASRSFEANVAAMSAVKDMIQRSI 140 Score = 37.9 bits (86), Expect = 1.4, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 20/47 (42%), Gaps = 6/47 (12%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSE 43 + ++G + A R + +N++N +T G +R V F Sbjct: 5 SLLSVGASGMSAQRARAELLVENLANAETTRTPEGGPYRRKDVVFET 51 >gi|315179405|gb|ADT86319.1| flage3llar hook-associated protein FlgK [Vibrio furnissii NCTC 11218] Length = 644 Score = 41.8 bits (96), Expect = 0.088, Method: Composition-based stats. Identities = 13/84 (15%), Positives = 28/84 (33%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 N+G + L +++L+T N+SN +T G+ V + + Sbjct: 6 LNVGAQSVLTAQRQLNTTGHNISNVNTEGYSRQSVIQGTNMPRRYGGETYGMGVHVENVR 65 Query: 65 YLSKEVGSFISTGTELDFALEGDA 88 + D++ + D Sbjct: 66 RSWDQFAVKELNLATTDYSFKRDN 89 Score = 37.2 bits (84), Expect = 2.1, Method: Composition-based stats. Identities = 6/37 (16%), Positives = 13/37 (35%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N E M+ Q + + + +I + + Sbjct: 605 SGVNLDEEAANMMKFQQAYMASSRIIQAANDTFNTIL 641 >gi|304397201|ref|ZP_07379080.1| flagellar basal-body rod protein FlgB [Pantoea sp. aB] gi|304355350|gb|EFM19718.1| flagellar basal-body rod protein FlgB [Pantoea sp. aB] Length = 137 Score = 41.8 bits (96), Expect = 0.088, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 28/78 (35%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + G A QR +A N++N DT G++ + F+ + + ++ + S +A Sbjct: 6 DAALKFGTEALNLRAQRQEILASNIANADTPGYQARDIDFASELSRVMSNGRAEGSSMAL 65 Query: 62 GKEYLSKEVGSFISTGTE 79 + Sbjct: 66 KVTSARHIEAQTNGAPSM 83 >gi|91785627|ref|YP_560833.1| flagellar hook-associated protein FlgK [Burkholderia xenovorans LB400] gi|91689581|gb|ABE32781.1| Flagellar hook-associated protein [Burkholderia xenovorans LB400] Length = 657 Score = 41.8 bits (96), Expect = 0.088, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 24/70 (34%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M N+GL+ A + L+T N+SN T G+ ++E G Sbjct: 1 MSNLINLGLSGLNAAQWGLTTTGQNISNASTPGYTIETPVYAESGGQYTGSGYLPQGVST 60 Query: 61 SGKEYLSKEV 70 + + Sbjct: 61 TTVTRQYSQY 70 Score = 35.6 bits (80), Expect = 6.5, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 13/37 (35%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N E ++ Q + + + +I + + Sbjct: 617 SGVNINEEAANLLQYQQLYQANSKVIQTAQTLFQTIL 653 >gi|315121850|ref|YP_004062339.1| flagellar basal body rod protein FlgB [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495252|gb|ADR51851.1| flagellar basal body rod protein FlgB [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 183 Score = 41.8 bits (96), Expect = 0.089, Method: Composition-based stats. Identities = 11/72 (15%), Positives = 23/72 (31%), Gaps = 1/72 (1%) Query: 15 LEQRLSTVADNMSNTDTVGFR-TIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSF 73 L +R V++N++N T G+R F V+ + + + Sbjct: 70 LSERQKVVSENIANASTPGYRSKDISAFETVLNDNIAMARTHEAHLKAMDFDGFYRHVRT 129 Query: 74 ISTGTELDFALE 85 I ++ Sbjct: 130 IQAPLYQPIGVQ 141 >gi|251799725|ref|YP_003014456.1| flagellar hook-associated protein FlgK [Paenibacillus sp. JDR-2] gi|247547351|gb|ACT04370.1| flagellar hook-associated protein FlgK [Paenibacillus sp. JDR-2] Length = 518 Score = 41.8 bits (96), Expect = 0.089, Method: Composition-based stats. Identities = 11/89 (12%), Positives = 28/89 (31%), Gaps = 4/89 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV----VGAIKNDIDQKISFV 59 + + L+T N+SN +T G+ +V F+ + Sbjct: 7 GLETAKRSIFTTQTALNTTGHNISNANTSGYSRQRVNFTAARPIEAYGYSHSTAAGQLGT 66 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDA 88 +++ F+ + ++ G+ Sbjct: 67 GVEASSITRVRDKFLDSQFYSEYKWLGNY 95 Score = 40.6 bits (93), Expect = 0.18, Method: Composition-based stats. Identities = 5/41 (12%), Positives = 18/41 (43%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S + EM ++ +N+ ++ ++++ I ++ Sbjct: 474 SGVSLDEEMSDLVKFQHAYNASARVMTVIDETLDRIINSMG 514 >gi|15615024|ref|NP_243327.1| flagellar basal body rod protein FlgB [Bacillus halodurans C-125] gi|10175081|dbj|BAB06180.1| flagellar basal-body rod protein [Bacillus halodurans C-125] Length = 132 Score = 41.8 bits (96), Expect = 0.089, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 18/42 (42%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 + ++ N++N DT ++ KV F +V ++ Sbjct: 15 GLYGASLQQRAISQNIANVDTPNYKAKKVNFQKVFDEALSNT 56 >gi|27381987|ref|NP_773516.1| flagellar basal body rod protein FlgB [Bradyrhizobium japonicum USDA 110] gi|27355157|dbj|BAC52141.1| flagellar basal-body rod protein [Bradyrhizobium japonicum USDA 110] Length = 133 Score = 41.8 bits (96), Expect = 0.089, Method: Composition-based stats. Identities = 14/74 (18%), Positives = 30/74 (40%), Gaps = 1/74 (1%) Query: 8 GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIKNDIDQKISFVASGKEYL 66 + LE R ST+A N++N +T GF+ V+ F++V+ + + Sbjct: 17 ASSQARYLELRQSTIATNVANANTPGFKARDVEPFNKVLDGMPVRLATTSPTHMQLSATE 76 Query: 67 SKEVGSFISTGTEL 80 + + ++ Sbjct: 77 TDTRATSKKDSWDV 90 >gi|310659048|ref|YP_003936769.1| flagellar basal-body rod protein [Clostridium sticklandii DSM 519] gi|308825826|emb|CBH21864.1| flagellar basal-body rod protein [Clostridium sticklandii] Length = 130 Score = 41.8 bits (96), Expect = 0.090, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 27/78 (34%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69 A A R T+ N++N +T ++ V F E + KN+ + S Sbjct: 11 TALNAYNLRNETINKNLANVNTPNYKREVVSFEEYLDKSKNNYITGFKTNNKHIDIPSNN 70 Query: 70 VGSFISTGTELDFALEGD 87 + ++ + D Sbjct: 71 PSVPYTIKRDMSVSTRED 88 >gi|291562018|emb|CBL40832.1| flagellar basal-body rod protein FlgB [butyrate-producing bacterium SS3/4] Length = 130 Score = 41.8 bits (96), Expect = 0.090, Method: Composition-based stats. Identities = 12/90 (13%), Positives = 28/90 (31%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 +L R + +N++N DT GF++ + F + + + Sbjct: 16 LDSLWMRQNLTMNNIANVDTPGFKSQYMTFENELAQKIRSALTVKKTSMKNVARGIENMR 75 Query: 72 SFISTGTELDFALEGDAWFALESPRGIILT 101 + T L+ + + + T Sbjct: 76 PSVHTTLNESTRLDENNVDMDQEQVELART 105 >gi|242309690|ref|ZP_04808845.1| predicted protein [Helicobacter pullorum MIT 98-5489] gi|239523691|gb|EEQ63557.1| predicted protein [Helicobacter pullorum MIT 98-5489] Length = 74 Score = 41.8 bits (96), Expect = 0.090, Method: Composition-based stats. Identities = 9/74 (12%), Positives = 20/74 (27%) Query: 169 FVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228 S + + ++ LE SN + ++ + I Sbjct: 1 MNPISGSTYYGYDAFSNAQSGIDANMRSATLETSNTDITQSTVNTMNAQNGVEANAQTIQ 60 Query: 229 ENEKSMLEAIRNIA 242 + M A+ +A Sbjct: 61 TADSMMQSALDILA 74 >gi|154252985|ref|YP_001413809.1| flagellar hook-associated protein FlgK [Parvibaculum lavamentivorans DS-1] gi|154156935|gb|ABS64152.1| flagellar hook-associated protein FlgK [Parvibaculum lavamentivorans DS-1] Length = 613 Score = 41.8 bits (96), Expect = 0.090, Method: Composition-based stats. Identities = 4/32 (12%), Positives = 14/32 (43%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGF 34 ++ ++ + + + N++N T G+ Sbjct: 5 SALGAAMSGLNVTQAGIDVTSRNIANVGTAGY 36 Score = 36.0 bits (81), Expect = 4.4, Method: Composition-based stats. Identities = 5/36 (13%), Positives = 14/36 (38%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 N EM ++ L +++ +I ++ + Sbjct: 575 VNIDDEMSNLLLLQNAYSANARVITTIKQLFDVLLS 610 >gi|308186390|ref|YP_003930521.1| Flagellar basal-body rod protein flgB [Pantoea vagans C9-1] gi|308056900|gb|ADO09072.1| Flagellar basal-body rod protein flgB [Pantoea vagans C9-1] Length = 137 Score = 41.8 bits (96), Expect = 0.091, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 28/78 (35%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + G A QR +A N++N DT G++ + F+ + + ++ + S +A Sbjct: 6 DAALKFGTEALNLRAQRQEILASNIANADTPGYQARDIDFASELSRVMSNGRAEGSSMAL 65 Query: 62 GKEYLSKEVGSFISTGTE 79 + Sbjct: 66 KVTSARHIEAQTNGAPSM 83 >gi|260767921|ref|ZP_05876855.1| flagellar basal-body rod protein FlgC [Vibrio furnissii CIP 102972] gi|260615951|gb|EEX41136.1| flagellar basal-body rod protein FlgC [Vibrio furnissii CIP 102972] gi|315179624|gb|ADT86538.1| flagellar basal-body rod protein FlgC [Vibrio furnissii NCTC 11218] Length = 144 Score = 41.8 bits (96), Expect = 0.091, Method: Composition-based stats. Identities = 6/42 (14%), Positives = 18/42 (42%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ + + + EM M+ T+ F + ++ + + Sbjct: 97 GYVYYPDIDVVAEMADMMSATRSFETNVEVLSNVKSMQQGLL 138 Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 6/65 (9%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKISFVA 60 I +A A RL+TVA N++N D V +R +K F+ V + + A Sbjct: 9 IAGSAMTAQTVRLNTVASNLANADAVSANPDDAYRALKPVFATVYNKSQLATGDNVYPSA 68 Query: 61 SGKEY 65 + Sbjct: 69 EVRIV 73 >gi|254993553|ref|ZP_05275743.1| flagellar hook-associated protein FlgK [Listeria monocytogenes FSL J2-064] Length = 506 Score = 41.8 bits (96), Expect = 0.091, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 18/42 (42%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46 FN L+ A + N+SN +T G+ V + V G Sbjct: 6 FNTSLSGMSAAQIANMVAQQNISNMNTPGYIRQAVDQTAVYG 47 Score = 38.7 bits (88), Expect = 0.63, Method: Composition-based stats. Identities = 7/41 (17%), Positives = 14/41 (34%), Gaps = 2/41 (4%) Query: 198 FLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 LE N EM ++ + + T ++ M + Sbjct: 465 SLEG--VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALL 503 >gi|238755327|ref|ZP_04616670.1| Flagellar basal-body rod protein flgB [Yersinia ruckeri ATCC 29473] gi|238706463|gb|EEP98837.1| Flagellar basal-body rod protein flgB [Yersinia ruckeri ATCC 29473] gi|253317692|gb|ACT22781.1| flagellar basal body protein FlgB [Yersinia ruckeri] Length = 137 Score = 41.8 bits (96), Expect = 0.091, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 23/65 (35%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR ++ N++N DT GF+ + FS + + S ++ Sbjct: 15 ALNLRAQRQEILSANIANADTPGFQARDIDFSSQLQKVMEQGRVNGSGMSLSLTAARHIP 74 Query: 71 GSFIS 75 I Sbjct: 75 AQNIQ 79 >gi|148976400|ref|ZP_01813106.1| flagellar hook-associated protein K [Vibrionales bacterium SWAT-3] gi|145964223|gb|EDK29479.1| flagellar hook-associated protein K [Vibrionales bacterium SWAT-3] Length = 626 Score = 41.8 bits (96), Expect = 0.091, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 32/85 (37%), Gaps = 2/85 (2%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 N+G + L +++L+T N+SN +T G+ V V + V Sbjct: 6 LNVGAQSVLTAQRQLNTTGHNISNANTEGYSRQSVI-QGVNDPRQYGGQTYGMGVHVENV 64 Query: 65 YLSKEVGSFISTG-TELDFALEGDA 88 S + + + + A +GD Sbjct: 65 RRSWDQFAVNELNLSTTNAANKGDT 89 Score = 36.4 bits (82), Expect = 3.4, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 13/37 (35%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N E M+ Q + + + ++ + + Sbjct: 587 SGVNLDEEAANMMKFQQAYMASSRIMQAANDTFNTIL 623 >gi|84514835|ref|ZP_01002198.1| flagellar basal-body rod protein FlgC [Loktanella vestfoldensis SKA53] gi|84510994|gb|EAQ07448.1| flagellar basal-body rod protein FlgC [Loktanella vestfoldensis SKA53] Length = 139 Score = 41.8 bits (96), Expect = 0.091, Method: Composition-based stats. Identities = 6/42 (14%), Positives = 18/42 (42%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 GF+ + E+ M+ ++++ + ++ ML + Sbjct: 93 GFVYMPPVDMNEELVDMLEASRQYQNNLEVLTTMRTLMLRTV 134 Score = 39.1 bits (89), Expect = 0.53, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 29/85 (34%), Gaps = 6/85 (7%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDT-VG-----FRTIKVKFSEVVGAIKNDIDQKI 56 F+I + A RL+TVA N++N +T G FR ++ F + ++ Sbjct: 6 NVFDIAGRSMAAQMVRLNTVASNIANANTRSGSAEQTFRPLRPVFQTAFEGGIRNAERAT 65 Query: 57 SFVASGKEYLSKEVGSFISTGTELD 81 V + D Sbjct: 66 VDVKEIVALDREAQRVHEPGHPLAD 90 >gi|126441479|ref|YP_001057319.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei 668] gi|126220972|gb|ABN84478.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei 668] Length = 163 Score = 41.8 bits (96), Expect = 0.091, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 27/93 (29%), Gaps = 1/93 (1%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A R ++ N++N DT G+R V FS + + A+ Sbjct: 15 ALDVRAYRQELLSSNIANADTPGYRARDVDFSSTLARALKQDGAASAGNAAQLPLAQPAG 74 Query: 71 GSFISTGTELDFA-LEGDAWFALESPRGIILTR 102 + + A L G+ R Sbjct: 75 VASGMSMATTSGAHLAGNVKLIPTGGPSDDYGR 107 >gi|47095271|ref|ZP_00232882.1| flagellar hook-associated protein 1-related protein [Listeria monocytogenes str. 1/2a F6854] gi|254900059|ref|ZP_05259983.1| flagellar hook-associated protein FlgK [Listeria monocytogenes J0161] gi|254911388|ref|ZP_05261400.1| conserved hypothetical protein [Listeria monocytogenes J2818] gi|254935715|ref|ZP_05267412.1| flagellar hook-associated protein FlgK [Listeria monocytogenes F6900] gi|47016342|gb|EAL07264.1| flagellar hook-associated protein 1-related protein [Listeria monocytogenes str. 1/2a F6854] gi|258608298|gb|EEW20906.1| flagellar hook-associated protein FlgK [Listeria monocytogenes F6900] gi|293589325|gb|EFF97659.1| conserved hypothetical protein [Listeria monocytogenes J2818] Length = 506 Score = 41.8 bits (96), Expect = 0.091, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 18/42 (42%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46 FN L+ A + N+SN +T G+ V + V G Sbjct: 6 FNTSLSGMSAAQIANMVAQQNISNMNTPGYIRQAVDQTAVYG 47 Score = 38.7 bits (88), Expect = 0.64, Method: Composition-based stats. Identities = 7/41 (17%), Positives = 14/41 (34%), Gaps = 2/41 (4%) Query: 198 FLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 LE N EM ++ + + T ++ M + Sbjct: 465 SLEG--VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALL 503 >gi|296102911|ref|YP_003613057.1| flagellar basal body rod protein FlgB [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057370|gb|ADF62108.1| flagellar basal body rod protein FlgB [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 139 Score = 41.8 bits (96), Expect = 0.092, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 25/66 (37%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR +A N++N DT G++ + FS + + + S VA Sbjct: 15 ALNLRAQRQEILAANIANADTPGYQARDIDFSSELKKVMERGRAEGSGVALALTSSRHIP 74 Query: 71 GSFIST 76 ++ Sbjct: 75 AQAMTA 80 >gi|241766736|ref|ZP_04764570.1| flagellar basal body rod protein [Acidovorax delafieldii 2AN] gi|241362905|gb|EER58629.1| flagellar basal body rod protein [Acidovorax delafieldii 2AN] Length = 101 Score = 41.8 bits (96), Expect = 0.093, Method: Composition-based stats. Identities = 10/33 (30%), Positives = 16/33 (48%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 A + RL A+N++N +T G+R V Sbjct: 11 GLQAAQLRLDASANNVANMNTSGYRREAVAQQA 43 >gi|53724562|ref|YP_104795.1| flagellar basal body rod protein FlgB [Burkholderia mallei ATCC 23344] gi|67641535|ref|ZP_00440312.1| flagellar basal-body rod protein FlgB [Burkholderia mallei GB8 horse 4] gi|121600142|ref|YP_994288.1| flagellar basal body rod protein FlgB [Burkholderia mallei SAVP1] gi|124384637|ref|YP_001028063.1| flagellar basal body rod protein FlgB [Burkholderia mallei NCTC 10229] gi|126450078|ref|YP_001082870.1| flagellar basal body rod protein FlgB [Burkholderia mallei NCTC 10247] gi|126451866|ref|YP_001064561.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei 1106a] gi|167001533|ref|ZP_02267328.1| flagellar basal-body rod protein FlgB [Burkholderia mallei PRL-20] gi|167813798|ref|ZP_02445478.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei 91] gi|167822315|ref|ZP_02453786.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei 9] gi|167892407|ref|ZP_02479809.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei 7894] gi|167900905|ref|ZP_02488110.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei NCTC 13177] gi|167917161|ref|ZP_02504252.1| flagellar basal body rod protein FlgB [Burkholderia pseudomallei BCC215] gi|217424904|ref|ZP_03456400.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei 576] gi|226199738|ref|ZP_03795289.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei Pakistan 9] gi|242317296|ref|ZP_04816312.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei 1106b] gi|254174732|ref|ZP_04881393.1| flagellar basal-body rod protein FlgB [Burkholderia mallei ATCC 10399] gi|254182143|ref|ZP_04888740.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei 1655] gi|254188073|ref|ZP_04894585.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei Pasteur 52237] gi|254196553|ref|ZP_04902977.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei S13] gi|254201893|ref|ZP_04908257.1| flagellar basal-body rod protein FlgB [Burkholderia mallei FMH] gi|254207227|ref|ZP_04913578.1| flagellar basal-body rod protein FlgB [Burkholderia mallei JHU] gi|254359729|ref|ZP_04976000.1| flagellar basal-body rod protein FlgB [Burkholderia mallei 2002721280] gi|52427985|gb|AAU48578.1| flagellar basal-body rod protein FlgB [Burkholderia mallei ATCC 23344] gi|121228952|gb|ABM51470.1| flagellar basal-body rod protein FlgB [Burkholderia mallei SAVP1] gi|124292657|gb|ABN01926.1| flagellar basal-body rod protein FlgB [Burkholderia mallei NCTC 10229] gi|126225508|gb|ABN89048.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei 1106a] gi|126242948|gb|ABO06041.1| flagellar basal-body rod protein FlgB [Burkholderia mallei NCTC 10247] gi|147747787|gb|EDK54863.1| flagellar basal-body rod protein FlgB [Burkholderia mallei FMH] gi|147752769|gb|EDK59835.1| flagellar basal-body rod protein FlgB [Burkholderia mallei JHU] gi|148028943|gb|EDK86875.1| flagellar basal-body rod protein FlgB [Burkholderia mallei 2002721280] gi|157935753|gb|EDO91423.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei Pasteur 52237] gi|160695777|gb|EDP85747.1| flagellar basal-body rod protein FlgB [Burkholderia mallei ATCC 10399] gi|169653296|gb|EDS85989.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei S13] gi|184212681|gb|EDU09724.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei 1655] gi|217391924|gb|EEC31950.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei 576] gi|225928089|gb|EEH24125.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei Pakistan 9] gi|238522486|gb|EEP85930.1| flagellar basal-body rod protein FlgB [Burkholderia mallei GB8 horse 4] gi|242140535|gb|EES26937.1| flagellar basal-body rod protein FlgB [Burkholderia pseudomallei 1106b] gi|243062735|gb|EES44921.1| flagellar basal-body rod protein FlgB [Burkholderia mallei PRL-20] Length = 163 Score = 41.8 bits (96), Expect = 0.093, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 20/52 (38%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 A R ++ N++N DT G+R V FS + + A+ Sbjct: 15 ALDVRAYRQELLSSNIANADTPGYRARDVDFSSTLARALKQDGAASAGNAAQ 66 >gi|330811238|ref|YP_004355700.1| flagellar basal-body rod protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379346|gb|AEA70696.1| Putative flagellar basal-body rod protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 135 Score = 41.8 bits (96), Expect = 0.094, Method: Composition-based stats. Identities = 13/80 (16%), Positives = 27/80 (33%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + I A QR +A+N++N DT ++ + FS+V+ + Sbjct: 6 DKALGIHEQALSFRAQRAEVLANNIANADTPNYKARDLDFSKVLAEQNEKTKNGHFALNM 65 Query: 62 GKEYLSKEVGSFISTGTELD 81 + G + + Sbjct: 66 TNSRHIEAEGLGNGDESLMY 85 >gi|209966304|ref|YP_002299219.1| flagellar basal-body rod protein FlgC [Rhodospirillum centenum SW] gi|209959770|gb|ACJ00407.1| flagellar basal-body rod protein FlgC [Rhodospirillum centenum SW] Length = 146 Score = 41.8 bits (96), Expect = 0.094, Method: Composition-based stats. Identities = 11/93 (11%), Positives = 26/93 (27%), Gaps = 2/93 (2%) Query: 149 SQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKR--GFLEDSNANS 206 + + + G +V G + P E G + N + Sbjct: 51 TPRPYAPVSSGQTAVTGPDGQGMGTRAVFRATQPAFVPEFSPDSPFADADGMVAAPNVDL 110 Query: 207 MYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + E M + + + + ++ EA+ Sbjct: 111 VGETVAMTQGLDAYKANLRVFEAADELTREALN 143 Score = 39.1 bits (89), Expect = 0.55, Method: Composition-based stats. Identities = 10/33 (30%), Positives = 16/33 (48%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG 33 M I + A +RL+ ADN++N + G Sbjct: 1 MVDPIAIAGSGMTAQARRLAAGADNIANARSTG 33 >gi|160897165|ref|YP_001562747.1| flagellar basal-body rod protein FlgB [Delftia acidovorans SPH-1] gi|160362749|gb|ABX34362.1| flagellar basal-body rod protein FlgB [Delftia acidovorans SPH-1] Length = 129 Score = 41.8 bits (96), Expect = 0.094, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 23/69 (33%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QRL+ +A N++N DT G++ + F E + + S + Sbjct: 10 ALKIRTQRLAIIASNIANADTPGYQAKDLDFKEALERSNATMLSVSSTSKGHIPSSEMKS 69 Query: 71 GSFISTGTE 79 Sbjct: 70 IYDTQVAFR 78 >gi|321315384|ref|YP_004207671.1| flagellar basal body rod protein FlgB [Bacillus subtilis BSn5] gi|320021658|gb|ADV96644.1| flagellar basal body rod protein FlgB [Bacillus subtilis BSn5] Length = 129 Score = 41.8 bits (96), Expect = 0.095, Method: Composition-based stats. Identities = 8/45 (17%), Positives = 21/45 (46%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54 A + + + +N++N DT ++ KV F ++ + ++ Sbjct: 13 NALSRADIKQKVITNNIANIDTPNYKAKKVSFQNLLDQESSRLET 57 >gi|209695756|ref|YP_002263686.1| flagellar hook-associated protein FlgK [Aliivibrio salmonicida LFI1238] gi|208009709|emb|CAQ80013.1| flagellar hook-associated protein type 3 FlgM [Aliivibrio salmonicida LFI1238] Length = 626 Score = 41.8 bits (96), Expect = 0.095, Method: Composition-based stats. Identities = 15/95 (15%), Positives = 39/95 (41%), Gaps = 2/95 (2%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA--IKNDIDQKISFVASG 62 N+G L +++L+T + N++N +T GF V + ++ + A Sbjct: 6 LNLGTQGVLTAQRQLNTTSHNINNVNTEGFSRQSVVQETNMPHWVSGANLGAGVHVAAVR 65 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESPRG 97 + + + T L+++++ +A + + Sbjct: 66 RSFDQFATNELNLSTTNLNYSMDTEANLDVLTNMM 100 Score = 38.3 bits (87), Expect = 0.83, Method: Composition-based stats. Identities = 5/38 (13%), Positives = 16/38 (42%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S N E M+ Q + + + ++ +++ ++ Sbjct: 587 SGVNLDEEAANMMKFQQAYMASSRIMKAADETFNTILQ 624 >gi|322378745|ref|ZP_08053174.1| flagellar hook-associated protein FlgK [Helicobacter suis HS1] gi|321148775|gb|EFX43246.1| flagellar hook-associated protein FlgK [Helicobacter suis HS1] Length = 606 Score = 41.8 bits (96), Expect = 0.095, Method: Composition-based stats. Identities = 8/80 (10%), Positives = 26/80 (32%), Gaps = 2/80 (2%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKF--SEVVGAIKNDIDQKISFV 59 +S N A + + +N+SN + + +V + +++ ++ Sbjct: 5 LSSLNTSYTGLQAHQVMVDVTGNNISNANDPFYSRQRVIATPQSTLMYTNRNMNMGVNVQ 64 Query: 60 ASGKEYLSKEVGSFISTGTE 79 + + + + E Sbjct: 65 SIQRVHDDFVFARYTRANQE 84 Score = 41.4 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 6/37 (16%), Positives = 15/37 (40%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S +S EM +I + + +I ++ + + Sbjct: 566 SGVSSDEEMVNLIKFQSGYAANAKVITAIDRMIETLL 602 >gi|322380594|ref|ZP_08054746.1| flagellar hook-associated protein FlgK [Helicobacter suis HS5] gi|321146916|gb|EFX41664.1| flagellar hook-associated protein FlgK [Helicobacter suis HS5] Length = 606 Score = 41.8 bits (96), Expect = 0.095, Method: Composition-based stats. Identities = 8/80 (10%), Positives = 26/80 (32%), Gaps = 2/80 (2%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKF--SEVVGAIKNDIDQKISFV 59 +S N A + + +N+SN + + +V + +++ ++ Sbjct: 5 LSSLNTSYTGLQAHQVMVDVTGNNISNANDPFYSRQRVIATPQSTLMYTNRNMNMGVNVQ 64 Query: 60 ASGKEYLSKEVGSFISTGTE 79 + + + + E Sbjct: 65 SIQRVHDDFVFARYTRANQE 84 Score = 41.4 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 6/37 (16%), Positives = 15/37 (40%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S +S EM +I + + +I ++ + + Sbjct: 566 SGVSSDEEMVNLIKFQSGYAANAKVITAIDRMIETLL 602 >gi|157146229|ref|YP_001453548.1| flagellar basal body rod protein FlgB [Citrobacter koseri ATCC BAA-895] gi|157083434|gb|ABV13112.1| hypothetical protein CKO_01986 [Citrobacter koseri ATCC BAA-895] Length = 138 Score = 41.8 bits (96), Expect = 0.095, Method: Composition-based stats. Identities = 11/66 (16%), Positives = 26/66 (39%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR +A N++N DT G++ + F+ + + ++ +A Sbjct: 15 ALNLRAQRQEVLAANIANADTPGYQARDMDFASELKKVMVRGREETGGIALKLTSAQHIP 74 Query: 71 GSFIST 76 +++ Sbjct: 75 AQTVAS 80 >gi|54307267|ref|YP_128287.1| flagellar basal body rod protein FlgB [Photobacterium profundum SS9] gi|46911687|emb|CAG18485.1| Hypothetical FlgB putative flagellar basal-body rod protein [Photobacterium profundum SS9] Length = 139 Score = 41.8 bits (96), Expect = 0.095, Method: Composition-based stats. Identities = 9/36 (25%), Positives = 18/36 (50%) Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 QR +A N++N DT ++ + F + + I + Sbjct: 35 QRAKVLASNLANVDTPNYKARDISFEDAMSQIAGEA 70 >gi|300954378|ref|ZP_07166832.1| flagellar hook-associated protein FlgK [Escherichia coli MS 175-1] gi|301029703|ref|ZP_07192757.1| flagellar hook-associated protein FlgK [Escherichia coli MS 196-1] gi|299877391|gb|EFI85602.1| flagellar hook-associated protein FlgK [Escherichia coli MS 196-1] gi|300318614|gb|EFJ68398.1| flagellar hook-associated protein FlgK [Escherichia coli MS 175-1] gi|323942551|gb|EGB38718.1| flagellar hook protein FlgK [Escherichia coli E482] Length = 547 Score = 41.8 bits (96), Expect = 0.096, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 21/52 (40%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ + + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMEQANSTLGAGG 52 >gi|224498787|ref|ZP_03667136.1| flagellar hook-associated protein FlgK [Listeria monocytogenes Finland 1988] gi|254829362|ref|ZP_05234049.1| flagellar hook-associated protein FlgK [Listeria monocytogenes FSL N3-165] gi|254830304|ref|ZP_05234959.1| flagellar hook-associated protein FlgK [Listeria monocytogenes 10403S] gi|284801035|ref|YP_003412900.1| flagellar hook-associated protein FlgK [Listeria monocytogenes 08-5578] gi|284994177|ref|YP_003415945.1| flagellar hook-associated protein FlgK [Listeria monocytogenes 08-5923] gi|258601775|gb|EEW15100.1| flagellar hook-associated protein FlgK [Listeria monocytogenes FSL N3-165] gi|284056597|gb|ADB67538.1| flagellar hook-associated protein FlgK [Listeria monocytogenes 08-5578] gi|284059644|gb|ADB70583.1| flagellar hook-associated protein FlgK [Listeria monocytogenes 08-5923] Length = 506 Score = 41.8 bits (96), Expect = 0.096, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 18/42 (42%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46 FN L+ A + N+SN +T G+ V + V G Sbjct: 6 FNTSLSGMSAAQIANMVAQQNISNMNTPGYIRQAVDQTAVYG 47 Score = 38.7 bits (88), Expect = 0.66, Method: Composition-based stats. Identities = 7/41 (17%), Positives = 14/41 (34%), Gaps = 2/41 (4%) Query: 198 FLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 LE N EM ++ + + T ++ M + Sbjct: 465 SLEG--VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALL 503 >gi|16802747|ref|NP_464232.1| flagellar hook-associated protein FlgK [Listeria monocytogenes EGD-e] gi|224501990|ref|ZP_03670297.1| flagellar hook-associated protein FlgK [Listeria monocytogenes FSL R2-561] gi|16410094|emb|CAC98783.1| lmo0705 [Listeria monocytogenes EGD-e] Length = 506 Score = 41.8 bits (96), Expect = 0.096, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 18/42 (42%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46 FN L+ A + N+SN +T G+ V + V G Sbjct: 6 FNTSLSGMSAAQIANMVAQQNISNMNTPGYIRQAVDQTAVYG 47 Score = 38.7 bits (88), Expect = 0.66, Method: Composition-based stats. Identities = 7/41 (17%), Positives = 14/41 (34%), Gaps = 2/41 (4%) Query: 198 FLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 LE N EM ++ + + T ++ M + Sbjct: 465 SLEG--VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALL 503 >gi|254932015|ref|ZP_05265374.1| flagellar hook-associated protein FlgK [Listeria monocytogenes HPB2262] gi|293583567|gb|EFF95599.1| flagellar hook-associated protein FlgK [Listeria monocytogenes HPB2262] gi|328475667|gb|EGF46416.1| flagellar hook-associated protein FlgK [Listeria monocytogenes 220] Length = 506 Score = 41.4 bits (95), Expect = 0.097, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 18/42 (42%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46 FN L+ A + N+SN +T G+ V + V G Sbjct: 6 FNTSLSGMSAAQIANMVAQQNISNMNTPGYIRQAVDQTAVYG 47 Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 5/35 (14%), Positives = 12/35 (34%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 N EM ++ + + T ++ M + Sbjct: 469 VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALL 503 >gi|83719578|ref|YP_440798.1| flagellar basal body rod protein FlgB [Burkholderia thailandensis E264] gi|167617582|ref|ZP_02386213.1| flagellar basal body rod protein FlgB [Burkholderia thailandensis Bt4] gi|257140551|ref|ZP_05588813.1| flagellar basal body rod protein FlgB [Burkholderia thailandensis E264] gi|83653403|gb|ABC37466.1| flagellar basal-body rod protein FlgB [Burkholderia thailandensis E264] Length = 163 Score = 41.4 bits (95), Expect = 0.097, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 27/93 (29%), Gaps = 1/93 (1%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A R ++ N++N DT G+R V FS + + A+ Sbjct: 15 ALDVRAYRQELLSSNIANADTPGYRARDVDFSSTLARALKQDGAASAGNAAALPLAQPAG 74 Query: 71 GSFISTGTELDFA-LEGDAWFALESPRGIILTR 102 + + A L G+ R Sbjct: 75 VTSGMSMATTSGAHLAGNVKLTPTGGPSDDYGR 107 >gi|183179571|ref|ZP_02957782.1| flagellar hook-associated protein FlgK [Vibrio cholerae MZO-3] gi|183012982|gb|EDT88282.1| flagellar hook-associated protein FlgK [Vibrio cholerae MZO-3] Length = 624 Score = 41.4 bits (95), Expect = 0.098, Method: Composition-based stats. Identities = 14/84 (16%), Positives = 27/84 (32%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 N+G + L +++L+T N+SN +T G+ V + Sbjct: 6 LNVGTQSVLTAQRQLNTTGHNISNVNTEGYSRQSVIQGTNAPRQYGGETYGMGVHVENVR 65 Query: 65 YLSKEVGSFISTGTELDFALEGDA 88 + D+A + D Sbjct: 66 RSWDQFAVKELNIASTDYAFKRDT 89 Score = 37.2 bits (84), Expect = 2.1, Method: Composition-based stats. Identities = 6/37 (16%), Positives = 14/37 (37%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N E M+ Q + + + +I + + + Sbjct: 585 SGVNLDEEAANMMKFQQAYMASSRIIQASNDTFNTIL 621 >gi|78485806|ref|YP_391731.1| hypothetical protein Tcr_1465 [Thiomicrospira crunogena XCL-2] gi|78364092|gb|ABB42057.1| Flagellar hook-associated protein FlgK [Thiomicrospira crunogena XCL-2] Length = 630 Score = 41.4 bits (95), Expect = 0.098, Method: Composition-based stats. Identities = 13/76 (17%), Positives = 28/76 (36%), Gaps = 3/76 (3%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M NIG AA + + + N++N T G+ + ++ + ++ Sbjct: 1 MADMLNIGTAATNTFRRAIEVTSHNVANVGTEGYSRQRA---DITSSSASNAGYGFLGAG 57 Query: 61 SGKEYLSKEVGSFIST 76 S + + +I T Sbjct: 58 SRVSSIDRVYADYIQT 73 >gi|254227981|ref|ZP_04921411.1| flagellar basal-body rod protein FlgC [Vibrio sp. Ex25] gi|151939477|gb|EDN58305.1| flagellar basal-body rod protein FlgC [Vibrio sp. Ex25] Length = 144 Score = 41.4 bits (95), Expect = 0.098, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 19/43 (44%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ + + + EM M+ T+ F + ++ + +R Sbjct: 97 GYVYYPDIDVVAEMADMMSATRSFETNVEVLSNVKSMQQGLLR 139 Score = 35.6 bits (80), Expect = 6.8, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 6/46 (13%) Query: 10 AAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIK 49 +A A RL+TVA N++N D V ++ +K F+ V + Sbjct: 12 SAMTAQTVRLNTVASNLANADAVSANPDDAYKALKPVFATVYQKAQ 57 >gi|206895357|ref|YP_002246680.1| flagellar basal-body rod protein FlgB [Coprothermobacter proteolyticus DSM 5265] gi|206737974|gb|ACI17052.1| flagellar basal-body rod protein FlgB [Coprothermobacter proteolyticus DSM 5265] Length = 113 Score = 41.4 bits (95), Expect = 0.099, Method: Composition-based stats. Identities = 12/36 (33%), Positives = 19/36 (52%) Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 Q L V N++N DT G++ +V F V ++N Sbjct: 15 QNLQAVQSNLANVDTPGYKRQEVDFQTVFMELQNHG 50 >gi|254251198|ref|ZP_04944516.1| Flagellar hook-associated protein [Burkholderia dolosa AUO158] gi|124893807|gb|EAY67687.1| Flagellar hook-associated protein [Burkholderia dolosa AUO158] Length = 655 Score = 41.4 bits (95), Expect = 0.099, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 28/80 (35%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 T N+G++ A L+T N+SN T G+ + F+E G + Sbjct: 3 NTLMNLGVSGLNAALWGLTTTGQNISNAATPGYSVERPVFAEASGQYTSSGYLPQGVNTV 62 Query: 62 GKEYLSKEVGSFISTGTELD 81 + + S G + Sbjct: 63 TVQRQYSQYLSDQLNGAQSQ 82 Score = 36.4 bits (82), Expect = 3.1, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 11/37 (29%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N E ++ Q + + +I + Sbjct: 615 SGVNQNEEAANLMQYQQYYQANAKVIQTAATLFQTVL 651 >gi|2443633|gb|AAC33158.1| hook associated protein [Vibrio cholerae] Length = 624 Score = 41.4 bits (95), Expect = 0.099, Method: Composition-based stats. Identities = 14/84 (16%), Positives = 27/84 (32%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 N+G + L +++L+T N+SN +T G+ V + Sbjct: 6 LNVGTQSVLTAQRQLNTTGHNISNVNTEGYSRQSVIQGTNAPRQYGGETYGMGVHVENVR 65 Query: 65 YLSKEVGSFISTGTELDFALEGDA 88 + D+A + D Sbjct: 66 RSWDQFAVKELNIASTDYAFKRDT 89 Score = 37.2 bits (84), Expect = 2.1, Method: Composition-based stats. Identities = 6/37 (16%), Positives = 14/37 (37%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N E M+ Q + + + +I + + + Sbjct: 585 SGVNLDEEAANMMKFQQAYMASSRIIQASNDTFNTIL 621 >gi|89072317|ref|ZP_01158896.1| flagellar basal body rod protein [Photobacterium sp. SKA34] gi|89051849|gb|EAR57301.1| flagellar basal body rod protein [Photobacterium sp. SKA34] Length = 144 Score = 41.4 bits (95), Expect = 0.099, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 19/43 (44%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ + + + EM M+ T+ F + ++ + +R Sbjct: 97 GYVYYPDIDVVAEMADMMSATRSFETNVEVLSNVKSMQQGLLR 139 Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 29/71 (40%), Gaps = 6/71 (8%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKISFVA 60 I +A A RL+TVA N++N D V ++ +K F+ V + +Q A Sbjct: 9 IAGSAMNAQTIRLNTVASNLANADAVAANPDDAYKALKPVFATVYNKTQLTGEQADYPSA 68 Query: 61 SGKEYLSKEVG 71 + + Sbjct: 69 EVRIMDVVQHA 79 >gi|15642190|ref|NP_231822.1| flagellar hook-associated protein FlgK [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121726550|ref|ZP_01679799.1| flagellar hook-associated protein FlgK [Vibrio cholerae V52] gi|147675062|ref|YP_001217708.1| flagellar hook-associated protein FlgK [Vibrio cholerae O395] gi|153817114|ref|ZP_01969781.1| flagellar hook-associated protein FlgK [Vibrio cholerae NCTC 8457] gi|153820887|ref|ZP_01973554.1| flagellar hook-associated protein FlgK [Vibrio cholerae B33] gi|227082315|ref|YP_002810866.1| flagellar hook-associated protein FlgM [Vibrio cholerae M66-2] gi|229507732|ref|ZP_04397237.1| flagellar hook-associated protein FlgK [Vibrio cholerae BX 330286] gi|229512073|ref|ZP_04401552.1| flagellar hook-associated protein FlgK [Vibrio cholerae B33] gi|229519209|ref|ZP_04408652.1| flagellar hook-associated protein FlgK [Vibrio cholerae RC9] gi|229607236|ref|YP_002877884.1| flagellar hook-associated protein FlgK [Vibrio cholerae MJ-1236] gi|254849320|ref|ZP_05238670.1| flagellar hook-associated protein FlgK [Vibrio cholerae MO10] gi|255747110|ref|ZP_05421055.1| flagellar hook-associated protein FlgK [Vibrio cholera CIRS 101] gi|262167783|ref|ZP_06035485.1| flagellar hook-associated protein FlgK [Vibrio cholerae RC27] gi|298500431|ref|ZP_07010236.1| flagellar hook-associated protein FlgK [Vibrio cholerae MAK 757] gi|9656746|gb|AAF95336.1| flagellar hook-associated protein FlgM [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121631003|gb|EAX63382.1| flagellar hook-associated protein FlgK [Vibrio cholerae V52] gi|126512382|gb|EAZ74976.1| flagellar hook-associated protein FlgK [Vibrio cholerae NCTC 8457] gi|126521679|gb|EAZ78902.1| flagellar hook-associated protein FlgK [Vibrio cholerae B33] gi|146316945|gb|ABQ21484.1| flagellar hook-associated protein FlgK [Vibrio cholerae O395] gi|227010203|gb|ACP06415.1| flagellar hook-associated protein FlgM [Vibrio cholerae M66-2] gi|227014087|gb|ACP10297.1| flagellar hook-associated protein FlgM [Vibrio cholerae O395] gi|229343898|gb|EEO08873.1| flagellar hook-associated protein FlgK [Vibrio cholerae RC9] gi|229352038|gb|EEO16979.1| flagellar hook-associated protein FlgK [Vibrio cholerae B33] gi|229355237|gb|EEO20158.1| flagellar hook-associated protein FlgK [Vibrio cholerae BX 330286] gi|229369891|gb|ACQ60314.1| flagellar hook-associated protein FlgK [Vibrio cholerae MJ-1236] gi|254845025|gb|EET23439.1| flagellar hook-associated protein FlgK [Vibrio cholerae MO10] gi|255735512|gb|EET90912.1| flagellar hook-associated protein FlgK [Vibrio cholera CIRS 101] gi|262023848|gb|EEY42547.1| flagellar hook-associated protein FlgK [Vibrio cholerae RC27] gi|297541124|gb|EFH77178.1| flagellar hook-associated protein FlgK [Vibrio cholerae MAK 757] Length = 624 Score = 41.4 bits (95), Expect = 0.099, Method: Composition-based stats. Identities = 14/84 (16%), Positives = 27/84 (32%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 N+G + L +++L+T N+SN +T G+ V + Sbjct: 6 LNVGTQSVLTAQRQLNTTGHNISNVNTEGYSRQSVIQGTNAPRQYGGETYGMGVHVENVR 65 Query: 65 YLSKEVGSFISTGTELDFALEGDA 88 + D+A + D Sbjct: 66 RSWDQFAVKELNIASTDYAFKRDT 89 Score = 37.2 bits (84), Expect = 2.1, Method: Composition-based stats. Identities = 6/37 (16%), Positives = 14/37 (37%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N E M+ Q + + + +I + + + Sbjct: 585 SGVNLDEEAANMMKFQQAYMASSRIIQASNDTFNTIL 621 >gi|42524766|ref|NP_970146.1| flagellar basal-body rod protein FlgB [Bdellovibrio bacteriovorus HD100] gi|39576976|emb|CAE78205.1| flagellar basal-body rod protein FlgB [Bdellovibrio bacteriovorus HD100] Length = 136 Score = 41.4 bits (95), Expect = 0.10, Method: Composition-based stats. Identities = 9/80 (11%), Positives = 27/80 (33%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + N + + R + + N++N +T G+ K+ F + + ++ Sbjct: 6 DKTTNALATSLSMRQLRHNVTSSNIANAETPGYHAKKMDFEGALQRALDLDGANSLSTSN 65 Query: 62 GKEYLSKEVGSFISTGTELD 81 + + + + D Sbjct: 66 PEHFAVGGISVSKTRPDIYD 85 >gi|86146149|ref|ZP_01064475.1| flagellar hook-associated protein [Vibrio sp. MED222] gi|85836096|gb|EAQ54228.1| flagellar hook-associated protein [Vibrio sp. MED222] Length = 626 Score = 41.4 bits (95), Expect = 0.10, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 26/76 (34%), Gaps = 1/76 (1%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 N+G + L +++L+T N+SN +T G+ V V + V Sbjct: 6 LNVGAQSVLTAQRQLNTTGHNISNANTEGYSRQSVV-QGVNDPRQYGGQTYGMGVHVENV 64 Query: 65 YLSKEVGSFISTGTEL 80 S + + Sbjct: 65 RRSWDQFAVKELNLST 80 Score = 36.8 bits (83), Expect = 3.0, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 13/37 (35%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N E M+ Q + + + ++ + + Sbjct: 587 SGVNLDEEAANMMKFQQAYMASSRIMQAANDTFNTIL 623 >gi|229522140|ref|ZP_04411557.1| flagellar hook-associated protein FlgK [Vibrio cholerae TM 11079-80] gi|229341065|gb|EEO06070.1| flagellar hook-associated protein FlgK [Vibrio cholerae TM 11079-80] Length = 624 Score = 41.4 bits (95), Expect = 0.10, Method: Composition-based stats. Identities = 14/84 (16%), Positives = 27/84 (32%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 N+G + L +++L+T N+SN +T G+ V + Sbjct: 6 LNVGTQSVLTAQRQLNTTGHNISNVNTEGYSRQSVIQGTNAPRQYGGETYGMGVHVENVR 65 Query: 65 YLSKEVGSFISTGTELDFALEGDA 88 + D+A + D Sbjct: 66 RSWDQFAVKELNIASTDYAFKRDT 89 Score = 37.2 bits (84), Expect = 2.1, Method: Composition-based stats. Identities = 6/37 (16%), Positives = 14/37 (37%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N E M+ Q + + + +I + + + Sbjct: 585 SGVNLDEEAANMMKFQQAYMASSRIIQASNDTFNTIL 621 >gi|153213645|ref|ZP_01948918.1| flagellar hook-associated protein FlgK [Vibrio cholerae 1587] gi|153825351|ref|ZP_01978018.1| flagellar hook-associated protein FlgK [Vibrio cholerae MZO-2] gi|153829350|ref|ZP_01982017.1| flagellar hook-associated protein FlgK [Vibrio cholerae 623-39] gi|229524186|ref|ZP_04413591.1| flagellar hook-associated protein FlgK [Vibrio cholerae bv. albensis VL426] gi|229528804|ref|ZP_04418194.1| flagellar hook-associated protein FlgK [Vibrio cholerae 12129(1)] gi|262191683|ref|ZP_06049859.1| flagellar hook-associated protein FlgK [Vibrio cholerae CT 5369-93] gi|124115844|gb|EAY34664.1| flagellar hook-associated protein FlgK [Vibrio cholerae 1587] gi|148875191|gb|EDL73326.1| flagellar hook-associated protein FlgK [Vibrio cholerae 623-39] gi|149741035|gb|EDM55104.1| flagellar hook-associated protein FlgK [Vibrio cholerae MZO-2] gi|229332578|gb|EEN98064.1| flagellar hook-associated protein FlgK [Vibrio cholerae 12129(1)] gi|229337767|gb|EEO02784.1| flagellar hook-associated protein FlgK [Vibrio cholerae bv. albensis VL426] gi|262032422|gb|EEY50984.1| flagellar hook-associated protein FlgK [Vibrio cholerae CT 5369-93] gi|327484710|gb|AEA79117.1| Flagellar hook-associated protein FlgK [Vibrio cholerae LMA3894-4] Length = 624 Score = 41.4 bits (95), Expect = 0.10, Method: Composition-based stats. Identities = 14/84 (16%), Positives = 27/84 (32%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 N+G + L +++L+T N+SN +T G+ V + Sbjct: 6 LNVGTQSVLTAQRQLNTTGHNISNVNTEGYSRQSVIQGTNAPRQYGGETYGMGVHVENVR 65 Query: 65 YLSKEVGSFISTGTELDFALEGDA 88 + D+A + D Sbjct: 66 RSWDQFAVKELNIASTDYAFKRDT 89 Score = 37.2 bits (84), Expect = 2.1, Method: Composition-based stats. Identities = 6/37 (16%), Positives = 14/37 (37%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N E M+ Q + + + +I + + + Sbjct: 585 SGVNLDEEAANMMKFQQAYMASSRIIQASNDTFNTIL 621 >gi|262161346|ref|ZP_06030456.1| flagellar hook-associated protein FlgK [Vibrio cholerae INDRE 91/1] gi|262028657|gb|EEY47311.1| flagellar hook-associated protein FlgK [Vibrio cholerae INDRE 91/1] Length = 624 Score = 41.4 bits (95), Expect = 0.10, Method: Composition-based stats. Identities = 14/84 (16%), Positives = 27/84 (32%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 N+G + L +++L+T N+SN +T G+ V + Sbjct: 6 LNVGTQSVLTAQRQLNTTGHNISNVNTEGYSRQSVIQGTNAPRQYGGETYGMGVHVENVR 65 Query: 65 YLSKEVGSFISTGTELDFALEGDA 88 + D+A + D Sbjct: 66 RSWDQFAVKELNIASTDYAFKRDT 89 Score = 37.2 bits (84), Expect = 2.1, Method: Composition-based stats. Identities = 6/37 (16%), Positives = 14/37 (37%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N E M+ Q + + + +I + + + Sbjct: 585 SGVNLDEEAANMMKFQQAYMASSRIIQASNDTFNTIL 621 >gi|229513835|ref|ZP_04403297.1| flagellar hook-associated protein FlgK [Vibrio cholerae TMA 21] gi|229349016|gb|EEO13973.1| flagellar hook-associated protein FlgK [Vibrio cholerae TMA 21] Length = 624 Score = 41.4 bits (95), Expect = 0.10, Method: Composition-based stats. Identities = 14/84 (16%), Positives = 27/84 (32%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 N+G + L +++L+T N+SN +T G+ V + Sbjct: 6 LNVGTQSVLTAQRQLNTTGHNISNVNTEGYSRQSVIQGTNAPRQYGGETYGMGVHVENVR 65 Query: 65 YLSKEVGSFISTGTELDFALEGDA 88 + D+A + D Sbjct: 66 RSWDQFAVKELNIASTDYAFKRDT 89 Score = 37.2 bits (84), Expect = 2.2, Method: Composition-based stats. Identities = 6/37 (16%), Positives = 14/37 (37%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N E M+ Q + + + +I + + + Sbjct: 585 SGVNLDEEAANMMKFQQAYMASSRIIQASNDTFNTIL 621 >gi|225375213|ref|ZP_03752434.1| hypothetical protein ROSEINA2194_00838 [Roseburia inulinivorans DSM 16841] gi|225212880|gb|EEG95234.1| hypothetical protein ROSEINA2194_00838 [Roseburia inulinivorans DSM 16841] Length = 610 Score = 41.4 bits (95), Expect = 0.10, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 17/40 (42%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 I + A + L+T A+N+SN T G+ S Sbjct: 7 GLTIASSGLSAYQAALNTTANNISNEQTKGYSRQAANLSA 46 >gi|190574266|ref|YP_001972111.1| flagellar basal body rod protein FlgB [Stenotrophomonas maltophilia K279a] gi|254523965|ref|ZP_05136020.1| flagellar basal-body rod protein FlgB [Stenotrophomonas sp. SKA14] gi|190012188|emb|CAQ45811.1| putative flagellar basal-body rod protein FlgB [Stenotrophomonas maltophilia K279a] gi|219721556|gb|EED40081.1| flagellar basal-body rod protein FlgB [Stenotrophomonas sp. SKA14] Length = 131 Score = 41.4 bits (95), Expect = 0.10, Method: Composition-based stats. Identities = 12/55 (21%), Positives = 22/55 (40%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65 A EQR+ +A N+ N DT G++ + F + + + + Y Sbjct: 15 AMPLREQRMKLIASNLGNADTPGYKAQDLDFDAALRHAQGQDANGLMATTHEQHY 69 >gi|121586274|ref|ZP_01676064.1| flagellar hook-associated protein FlgK [Vibrio cholerae 2740-80] gi|121549540|gb|EAX59566.1| flagellar hook-associated protein FlgK [Vibrio cholerae 2740-80] Length = 624 Score = 41.4 bits (95), Expect = 0.10, Method: Composition-based stats. Identities = 14/84 (16%), Positives = 27/84 (32%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 N+G + L +++L+T N+SN +T G+ V + Sbjct: 6 LNVGTQSVLTAQRQLNTTGHNISNVNTEGYSRQSVIQGTNAPRQYGGETYGMGVHVENVR 65 Query: 65 YLSKEVGSFISTGTELDFALEGDA 88 + D+A + D Sbjct: 66 RSWDQFAVKELNIASTDYAFKRDT 89 Score = 37.2 bits (84), Expect = 2.2, Method: Composition-based stats. Identities = 6/37 (16%), Positives = 14/37 (37%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N E M+ Q + + + +I + + + Sbjct: 585 SGVNLDEEAANMMKFQQAYMASSRIIQASNDTFNTIL 621 >gi|186477694|ref|YP_001859164.1| flagellar basal body rod protein FlgB [Burkholderia phymatum STM815] gi|184194153|gb|ACC72118.1| flagellar basal-body rod protein FlgB [Burkholderia phymatum STM815] Length = 163 Score = 41.4 bits (95), Expect = 0.10, Method: Composition-based stats. Identities = 8/69 (11%), Positives = 24/69 (34%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A R ++ N++N+DT G++ + F+ + + ++ + + Sbjct: 15 ALDVRAYRQELLSSNIANSDTPGYKARDIDFASSLAGALKKSGGSTAGASNNSQLAMTQP 74 Query: 71 GSFISTGTE 79 + Sbjct: 75 AGVSQGMSM 83 >gi|90422997|ref|YP_531367.1| flagellar hook-associated protein [Rhodopseudomonas palustris BisB18] gi|90105011|gb|ABD87048.1| Flagellar hook-associated protein [Rhodopseudomonas palustris BisB18] Length = 626 Score = 41.4 bits (95), Expect = 0.10, Method: Composition-based stats. Identities = 13/92 (14%), Positives = 33/92 (35%), Gaps = 3/92 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + +I +A A + ++ V+ N++N +T G+ V + V + ++ + Sbjct: 6 ALSIAMAGLRANQAAMTLVSSNVANAETPGYIRKSV---DQVTTNTGSMGSGVNINGVNR 62 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESP 95 E S + + +A + Sbjct: 63 ELDSFVQTQLRTETSGAGYASLKSDFLQQLQG 94 Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 5/38 (13%), Positives = 15/38 (39%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S N EM ++ L +++ ++ + ++ Sbjct: 587 SGVNMDEEMAHLLSLQNAYSANARVMSTVNQMYQTLMQ 624 >gi|292900255|ref|YP_003539624.1| flagellar basal-body rod protein [Erwinia amylovora ATCC 49946] gi|291200103|emb|CBJ47229.1| flagellar basal-body rod protein [Erwinia amylovora ATCC 49946] Length = 135 Score = 41.4 bits (95), Expect = 0.10, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 24/68 (35%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A L +R +A N++N DT G+ + FS+ + + S V+ Sbjct: 15 ALSLLSRRQEVLASNIANADTPGYLARDIDFSQQLKNTLANQSMAKSPVSLSLTAEKHIE 74 Query: 71 GSFISTGT 78 G Sbjct: 75 GKGRPFDD 82 >gi|260772280|ref|ZP_05881196.1| flagellar hook-associated protein FlgK [Vibrio metschnikovii CIP 69.14] gi|260611419|gb|EEX36622.1| flagellar hook-associated protein FlgK [Vibrio metschnikovii CIP 69.14] Length = 641 Score = 41.4 bits (95), Expect = 0.10, Method: Composition-based stats. Identities = 12/76 (15%), Positives = 25/76 (32%), Gaps = 1/76 (1%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 N+G + L +++L+T N++N +T G+ V + V Sbjct: 6 LNLGAQSVLTAQRQLNTTGHNIANVNTEGYSRQSVI-QGTNAPRQLGGQTYGMGVHVENV 64 Query: 65 YLSKEVGSFISTGTEL 80 S + + Sbjct: 65 RRSWDQFAVKELNLAT 80 Score = 36.4 bits (82), Expect = 3.3, Method: Composition-based stats. Identities = 19/200 (9%), Positives = 48/200 (24%), Gaps = 19/200 (9%) Query: 40 KFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 +F + D ++ K ++ + + A P Sbjct: 459 EFEAYLVPNTGAGDHEMQIRVVDKNGQLLATQPYLFNDDQSKLPIVIPAQQTSGQPTVFT 518 Query: 100 LTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG 159 LTR + +A+ D ++ I + + I + T Sbjct: 519 LTRGAI-----ENDKFTANLNPAEGDNGNLRKMIHLQTTKKMNDNESTIIGLYHNLNTDF 573 Query: 160 LYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 + S + + G + S N E M+ Sbjct: 574 GLKLSTSTRL------------ADVARLEKEAAESRIGSV--SGVNLDEEAANMMKFQHA 619 Query: 220 FNSITTLIDENEKSMLEAIR 239 + + + ++ + ++ Sbjct: 620 YMASSRIMQAANDTFNTILQ 639 >gi|257095362|ref|YP_003169003.1| flagellar basal-body rod protein FlgB [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047886|gb|ACV37074.1| flagellar basal-body rod protein FlgB [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 136 Score = 41.4 bits (95), Expect = 0.10, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 22/58 (37%), Gaps = 4/58 (6%) Query: 1 MQTSFNIGLA----AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54 M + + L+ A R +A N++N DT +R F+ + + Q Sbjct: 1 MVSMLDSALSFQQQALTLRAHRQQVLAANIANADTPNYRARDFDFAAALQNAVSGRSQ 58 >gi|226223336|ref|YP_002757443.1| flagellar hook-associated protein FlgK [Listeria monocytogenes Clip81459] gi|254824015|ref|ZP_05229016.1| flagellar hook-associated protein FlgK [Listeria monocytogenes FSL J1-194] gi|225875798|emb|CAS04501.1| Putative flagellar hook-associated protein FlgK [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|293593243|gb|EFG01004.1| flagellar hook-associated protein FlgK [Listeria monocytogenes FSL J1-194] Length = 506 Score = 41.4 bits (95), Expect = 0.10, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 18/42 (42%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46 FN L+ A + N+SN +T G+ V + V G Sbjct: 6 FNTSLSGMSAAQIANMVAQQNISNMNTPGYIRQAVDQTAVYG 47 Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 5/35 (14%), Positives = 12/35 (34%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 N EM ++ + + T ++ M + Sbjct: 469 VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALL 503 >gi|218708810|ref|YP_002416431.1| flagellar hook-associated protein FlgK [Vibrio splendidus LGP32] gi|218321829|emb|CAV17801.1| flagellar hook-associated protein FlgK [Vibrio splendidus LGP32] Length = 626 Score = 41.4 bits (95), Expect = 0.10, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 26/76 (34%), Gaps = 1/76 (1%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 N+G + L +++L+T N+SN +T G+ V V + V Sbjct: 6 LNVGAQSVLTAQRQLNTTGHNISNANTEGYSRQSVV-QGVNDPRQYGGQTYGMGVHVENV 64 Query: 65 YLSKEVGSFISTGTEL 80 S + + Sbjct: 65 RRSWDQFAVKELNLST 80 Score = 36.8 bits (83), Expect = 3.1, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 13/37 (35%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N E M+ Q + + + ++ + + Sbjct: 587 SGVNLDEEAANMMKFQQAYMASSRIMQAANDTFNTIL 623 >gi|170751912|ref|YP_001758172.1| flagellar hook-associated protein FlgK [Methylobacterium radiotolerans JCM 2831] gi|170658434|gb|ACB27489.1| flagellar hook-associated protein FlgK [Methylobacterium radiotolerans JCM 2831] Length = 627 Score = 41.4 bits (95), Expect = 0.10, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 31/98 (31%) Query: 142 VGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLED 201 S G V A + +Q V + + S + + T + F Sbjct: 529 PQTFSSSSGIGGVSAPYSTSVIGFAQDIVSTQGANASNASALDATQQTALSTAQSRFSAG 588 Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + N EM +I L + + ++ + + ++ Sbjct: 589 AGVNIDQEMSNLIALQTAYGANARVLTAARDMLTQLLQ 626 >gi|254853091|ref|ZP_05242439.1| flagellar hook-associated protein FlgK [Listeria monocytogenes FSL R2-503] gi|300764517|ref|ZP_07074510.1| flagellar hook-associated protein 1-related protein [Listeria monocytogenes FSL N1-017] gi|258606440|gb|EEW19048.1| flagellar hook-associated protein FlgK [Listeria monocytogenes FSL R2-503] gi|300514871|gb|EFK41925.1| flagellar hook-associated protein 1-related protein [Listeria monocytogenes FSL N1-017] Length = 506 Score = 41.4 bits (95), Expect = 0.10, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 18/42 (42%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46 FN L+ A + N+SN +T G+ V + V G Sbjct: 6 FNTSLSGMSAAQIANMVAQQNISNMNTPGYIRQAVDQTAVYG 47 Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 5/35 (14%), Positives = 12/35 (34%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 N EM ++ + + T ++ M + Sbjct: 469 VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALL 503 >gi|46906956|ref|YP_013345.1| flagellar hook-associated protein FlgK [Listeria monocytogenes serotype 4b str. F2365] gi|46880222|gb|AAT03522.1| flagellar hook-associated protein 1-related protein [Listeria monocytogenes serotype 4b str. F2365] Length = 506 Score = 41.4 bits (95), Expect = 0.10, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 18/42 (42%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46 FN L+ A + N+SN +T G+ V + V G Sbjct: 6 FNTSLSGMSAAQIANMVAQQNISNMNTPGYIRQAVDQTAVYG 47 Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 5/35 (14%), Positives = 12/35 (34%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 N EM ++ + + T ++ M + Sbjct: 469 VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALL 503 >gi|37679153|ref|NP_933762.1| flagellar hook-associated protein FlgK [Vibrio vulnificus YJ016] gi|320157103|ref|YP_004189482.1| flagellar hook-associated protein FlgK [Vibrio vulnificus MO6-24/O] gi|37197895|dbj|BAC93733.1| flagellar hook-associated protein FlgK [Vibrio vulnificus YJ016] gi|319932415|gb|ADV87279.1| flagellar hook-associated protein FlgK [Vibrio vulnificus MO6-24/O] Length = 638 Score = 41.4 bits (95), Expect = 0.10, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 30/83 (36%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 N+G + L +++L+T N+SN +T G+ V + + Sbjct: 6 LNVGTQSVLTAQRQLNTTGHNISNVNTEGYSRQSVIQATNDPRQFGGSTYGMGVHVENVR 65 Query: 65 YLSKEVGSFISTGTELDFALEGD 87 + + +FA +GD Sbjct: 66 RSWDQFAVNELNLSTTNFANKGD 88 Score = 37.2 bits (84), Expect = 2.0, Method: Composition-based stats. Identities = 5/38 (13%), Positives = 14/38 (36%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S N E M+ Q + + + ++ + ++ Sbjct: 599 SGVNLDEEAANMMRFQQAYMASSRIMQAANDTFNTILQ 636 >gi|261339373|ref|ZP_05967231.1| flagellar basal-body rod protein FlgB [Enterobacter cancerogenus ATCC 35316] gi|288318174|gb|EFC57112.1| flagellar basal-body rod protein FlgB [Enterobacter cancerogenus ATCC 35316] Length = 138 Score = 41.4 bits (95), Expect = 0.10, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 25/66 (37%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR +A N++N DT G++ + FS + + + + VA Sbjct: 15 ALNLRAQRQEILAANIANADTPGYQARDIDFSSELKKVMERGRAEGTGVALAMTSSRHIP 74 Query: 71 GSFIST 76 ++ Sbjct: 75 AQAMTA 80 >gi|217965197|ref|YP_002350875.1| flagellar hook-associated protein FlgK [Listeria monocytogenes HCC23] gi|217334467|gb|ACK40261.1| flagellar hook-associated protein FlgK [Listeria monocytogenes HCC23] gi|307570244|emb|CAR83423.1| flagellar hook-associated protein 1-related protein [Listeria monocytogenes L99] Length = 506 Score = 41.4 bits (95), Expect = 0.10, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 18/42 (42%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46 FN L+ A + N+SN +T G+ V + V G Sbjct: 6 FNTSLSGMSAAQIANMVAQQNISNMNTPGYIRQAVDQTAVYG 47 Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats. Identities = 5/35 (14%), Positives = 12/35 (34%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 N EM ++ + + T ++ M + Sbjct: 469 VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALL 503 >gi|163789664|ref|ZP_02184102.1| flagellar hook-associated protein K [Carnobacterium sp. AT7] gi|159875196|gb|EDP69262.1| flagellar hook-associated protein K [Carnobacterium sp. AT7] Length = 98 Score = 41.4 bits (95), Expect = 0.10, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 20/56 (35%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 N L + L T + N+SN +T G+ KV I Q + V Sbjct: 8 LNNATKGLLVQQSALQTTSHNISNANTEGYSRQKVTMVADNPYTLGGIGQLGTGVR 63 >gi|323139652|ref|ZP_08074694.1| flagellar basal-body rod protein FlgC [Methylocystis sp. ATCC 49242] gi|322395084|gb|EFX97643.1| flagellar basal-body rod protein FlgC [Methylocystis sp. ATCC 49242] Length = 139 Score = 41.4 bits (95), Expect = 0.10, Method: Composition-based stats. Identities = 14/96 (14%), Positives = 30/96 (31%) Query: 143 GEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDS 202 G K I+ VR G+ P + + G ++ Sbjct: 38 NTPGADPYVRKTISFANELDRASGVRLVRVNQIGVDPTPFTIEHDPGNPAADANGDVKRP 97 Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 N N + EMG M + + + ++ ++ + + Sbjct: 98 NVNLLVEMGDMREANRAYEADLQVMKQSRDLIAMTV 133 Score = 36.8 bits (83), Expect = 2.7, Method: Composition-based stats. Identities = 15/106 (14%), Positives = 29/106 (27%), Gaps = 8/106 (7%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT----DTVG---FRTIKVKFS-EVVGAIKNDID 53 S + A A RL V++NM+N +T G + + F+ E+ A + Sbjct: 6 DASLKVAGAGLAAQSARLRIVSENMANAQSTGNTPGADPYVRKTISFANELDRASGVRLV 65 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 + + + + D Sbjct: 66 RVNQIGVDPTPFTIEHDPGNPAADANGDVKRPNVNLLVEMGDMREA 111 >gi|295096219|emb|CBK85309.1| flagellar hook-associated protein FlgK [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 546 Score = 41.4 bits (95), Expect = 0.10, Method: Composition-based stats. Identities = 9/52 (17%), Positives = 21/52 (40%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+TV++N+S+ + G+ + Sbjct: 1 MSSLINSAMSGLSAAQSALNTVSNNISSYNVAGYTRQTTILGASNSTLTGGG 52 >gi|313624689|gb|EFR94646.1| flagellar hook-associated protein FlgK [Listeria innocua FSL J1-023] Length = 506 Score = 41.4 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 18/42 (42%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46 FN L+ A + N+SN +T G+ V + V G Sbjct: 6 FNTSLSGMSAAQIANMVAQQNISNMNTPGYIRQAVDQTAVYG 47 Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats. Identities = 5/35 (14%), Positives = 12/35 (34%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 N EM ++ + + T ++ M + Sbjct: 469 VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALL 503 >gi|313620048|gb|EFR91563.1| flagellar hook-associated protein FlgK [Listeria innocua FSL S4-378] Length = 506 Score = 41.4 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 18/42 (42%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46 FN L+ A + N+SN +T G+ V + V G Sbjct: 6 FNTSLSGMSAAQIANMVAQQNISNMNTPGYIRQAVDQTAVYG 47 Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats. Identities = 5/35 (14%), Positives = 12/35 (34%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 N EM ++ + + T ++ M + Sbjct: 469 VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALL 503 >gi|163783192|ref|ZP_02178186.1| flagellar hook associated protein FlgK [Hydrogenivirga sp. 128-5-R1-1] gi|159881526|gb|EDP75036.1| flagellar hook associated protein FlgK [Hydrogenivirga sp. 128-5-R1-1] Length = 528 Score = 41.4 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 2/40 (5%), Positives = 18/40 (45%) Query: 200 EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 E + + E +++ + + + ++ ++ ++ + + Sbjct: 488 EMQSVSIDREFMEIMKVKRTYEAVAKVVTTIDELLQTTLN 527 >gi|149191151|ref|ZP_01869409.1| flagellar basal-body rod protein C [Vibrio shilonii AK1] gi|148834989|gb|EDL51968.1| flagellar basal-body rod protein C [Vibrio shilonii AK1] Length = 142 Score = 41.4 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 17/41 (41%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 G++ S N + EM MI T+ F + ++ + Sbjct: 96 GYVYYSGINVVNEMADMISATRSFEASVEVLGNVKSMQQSL 136 Score = 39.1 bits (89), Expect = 0.55, Method: Composition-based stats. Identities = 15/96 (15%), Positives = 30/96 (31%), Gaps = 7/96 (7%) Query: 4 SFN-IGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56 +A A RL+T++ N++N D+V ++ +K FS V Q Sbjct: 5 GIYETAGSAMSAQTVRLNTISSNLANADSVSGDPSKVYKPLKPIFSAVYNHFNAQETQHQ 64 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL 92 V + + + + + Sbjct: 65 GVVPIRIADVVEVSSMMEGRYEPNNPLSNDEGYVYY 100 >gi|16799788|ref|NP_470056.1| flagellar hook-associated protein FlgK [Listeria innocua Clip11262] gi|16413165|emb|CAC95945.1| lin0713 [Listeria innocua Clip11262] Length = 506 Score = 41.4 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 18/42 (42%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46 FN L+ A + N+SN +T G+ V + V G Sbjct: 6 FNTSLSGMSAAQIANMVAQQNISNMNTPGYIRQAVDQTAVYG 47 Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats. Identities = 5/35 (14%), Positives = 12/35 (34%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 N EM ++ + + T ++ M + Sbjct: 469 VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALL 503 >gi|297580837|ref|ZP_06942762.1| flagellar hook-associated protein FlgK [Vibrio cholerae RC385] gi|297534663|gb|EFH73499.1| flagellar hook-associated protein FlgK [Vibrio cholerae RC385] Length = 624 Score = 41.4 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 14/84 (16%), Positives = 27/84 (32%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 N+G + L +++L+T N+SN +T G+ V + Sbjct: 6 LNVGTQSVLTAQRQLNTTGHNISNVNTEGYSRQSVIQGTNAPRQYGGETYGMGVHVENVR 65 Query: 65 YLSKEVGSFISTGTELDFALEGDA 88 + D+A + D Sbjct: 66 RSWDQFAVKELNIASTDYAFKRDT 89 Score = 37.2 bits (84), Expect = 2.2, Method: Composition-based stats. Identities = 6/37 (16%), Positives = 14/37 (37%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N E M+ Q + + + +I + + + Sbjct: 585 SGVNLDEEAANMMKFQQAYMASSRIIQASNDTFNTIL 621 >gi|254225807|ref|ZP_04919412.1| flagellar hook-associated protein FlgK [Vibrio cholerae V51] gi|125621713|gb|EAZ50042.1| flagellar hook-associated protein FlgK [Vibrio cholerae V51] Length = 624 Score = 41.4 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 15/84 (17%), Positives = 27/84 (32%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 N+G + L +++L+T N+SN +T G+ V + Sbjct: 6 LNVGTQSVLTAQRQLNTTGHNISNVNTEGYSRQSVIQGTNAPRQYGGETYGMGVHVENVR 65 Query: 65 YLSKEVGSFISTGTELDFALEGDA 88 + DFA + D Sbjct: 66 RSWDQFAVKELNIASTDFAFKRDT 89 Score = 37.2 bits (84), Expect = 2.1, Method: Composition-based stats. Identities = 6/37 (16%), Positives = 14/37 (37%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N E M+ Q + + + +I + + + Sbjct: 585 SGVNLDEEAANMMKFQQAYMASSRIIQASNDTFNTIL 621 >gi|229058377|ref|ZP_04196761.1| Flagellar basal-body rod protein [Bacillus cereus AH603] gi|228719886|gb|EEL71476.1| Flagellar basal-body rod protein [Bacillus cereus AH603] Length = 161 Score = 41.4 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 20/34 (58%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV 45 L + +TV+ N++N +T G++ V F+E + Sbjct: 38 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEKM 71 >gi|23092321|gb|AAN08646.1| FlgK [Aeromonas hydrophila] Length = 664 Score = 41.4 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 8/35 (22%), Positives = 19/35 (54%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39 IG + +A ++ L T ++N+ N ++ G+ + Sbjct: 6 LGIGTSGVMAQQRLLQTTSNNIVNVNSQGYVRERT 40 >gi|319764536|ref|YP_004128473.1| flagellar basal-body rod protein flgb [Alicycliphilus denitrificans BC] gi|330826752|ref|YP_004390055.1| flagellar basal-body rod protein FlgB [Alicycliphilus denitrificans K601] gi|317119097|gb|ADV01586.1| flagellar basal-body rod protein FlgB [Alicycliphilus denitrificans BC] gi|329312124|gb|AEB86539.1| flagellar basal-body rod protein FlgB [Alicycliphilus denitrificans K601] Length = 138 Score = 41.4 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 12/62 (19%), Positives = 24/62 (38%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69 A L +R +A N++N DT G+ +F++ + A + S + Sbjct: 14 NALLLRSERQRAIASNIANADTPGYVARDFQFADALRAAEGARAPGGMRQQSVSDPRHIP 73 Query: 70 VG 71 + Sbjct: 74 LP 75 >gi|148554191|ref|YP_001261773.1| flagellar basal-body rod protein FlgC [Sphingomonas wittichii RW1] gi|148499381|gb|ABQ67635.1| flagellar basal-body rod protein FlgC [Sphingomonas wittichii RW1] Length = 134 Score = 41.4 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 4/36 (11%), Positives = 18/36 (50%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + E+ +M+ +++ + +++ + L+ +R Sbjct: 96 VDQAQELVEMMETARQYQNNVSVMQTAKTLTLDTLR 131 Score = 37.2 bits (84), Expect = 2.0, Method: Composition-based stats. Identities = 22/125 (17%), Positives = 38/125 (30%), Gaps = 9/125 (7%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFS---EVVGAIKNDI 52 + F+I A A RL+T A N++N +V FR IK FS + G + Sbjct: 5 LSVFDIAGRAMSAQMVRLNTSASNLANAGSVAGSKAEAFRAIKPVFSSVTDAPGVATVKV 64 Query: 53 DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDG 112 DQ ++ + G + ++ + T Sbjct: 65 DQVVASNIEPTKRYDPNHPKADKDGNVWEAGVDQAQELVEMMETARQYQNNVSVMQTAKT 124 Query: 113 SLVSA 117 + Sbjct: 125 LTLDT 129 >gi|121607564|ref|YP_995371.1| flagellar basal-body rod protein FlgB [Verminephrobacter eiseniae EF01-2] gi|121552204|gb|ABM56353.1| flagellar basal-body rod protein FlgB [Verminephrobacter eiseniae EF01-2] Length = 141 Score = 41.4 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 21/41 (51%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50 AA + QR T+A N++N DT G+ KF + + + Sbjct: 14 AALVLRAQRQRTIASNIANADTPGYAARDFKFGDALREVAG 54 >gi|315281368|ref|ZP_07870006.1| flagellar hook-associated protein FlgK [Listeria marthii FSL S4-120] gi|313614985|gb|EFR88491.1| flagellar hook-associated protein FlgK [Listeria marthii FSL S4-120] Length = 506 Score = 41.4 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 18/42 (42%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46 FN L+ A + N+SN +T G+ V + V G Sbjct: 6 FNTSLSGMSAAQIANMVAQQNISNMNTPGYIRQAVDQTAVYG 47 Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats. Identities = 5/35 (14%), Positives = 12/35 (34%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 N EM ++ + + T ++ M + Sbjct: 469 VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALL 503 >gi|104782836|ref|YP_609334.1| flagellar hook-associated protein FlgK [Pseudomonas entomophila L48] gi|95111823|emb|CAK16547.1| flagellar hook-associated protein FlgK [Pseudomonas entomophila L48] Length = 681 Score = 41.4 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 9/52 (17%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + NIG++ A + + T+ +N++N D + ++ + Sbjct: 1 MASLINIGMSGLGAAQSGMYTLGNNIANADVESYSRQQIVQKTKGSQQVGQV 52 >gi|330501143|ref|YP_004378012.1| flagellar hook-associated protein FlgK [Pseudomonas mendocina NK-01] gi|328915429|gb|AEB56260.1| flagellar hook-associated protein FlgK [Pseudomonas mendocina NK-01] Length = 455 Score = 41.4 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 4/38 (10%), Positives = 13/38 (34%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S + E ++ Q + + +I + + + Sbjct: 416 SAVSLDEEAVNLMTYQQAYQANMKVISTANQLFDDMLS 453 Score = 41.4 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 13/84 (15%), Positives = 28/84 (33%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66 I + A + L+T N++N T GF ++ + G + + ++ + Sbjct: 7 IAYSGVRASQVALATTGQNIANVKTPGFSRLQTITGSLAGQGGLSVGGGVEVISIRRMTN 66 Query: 67 SKEVGSFISTGTELDFALEGDAWF 90 TE +F + Sbjct: 67 EFHNQQLWRATTEQNFYSASQQYL 90 >gi|239628960|ref|ZP_04671991.1| flagellar hook-protein FlgK [Clostridiales bacterium 1_7_47_FAA] gi|239519106|gb|EEQ58972.1| flagellar hook-protein FlgK [Clostridiales bacterium 1_7_47FAA] Length = 489 Score = 41.4 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 6/37 (16%), Positives = 16/37 (43%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 + ++ + V +N+SN +T G+ ++ Sbjct: 7 GLETAKRGIMVNQKAIDIVGNNISNVNTKGYTRQRLD 43 Score = 39.9 bits (91), Expect = 0.35, Method: Composition-based stats. Identities = 5/41 (12%), Positives = 16/41 (39%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S + E M+ + + ++ L+ ++ + I + Sbjct: 445 SGVSLNEEGINMMTYNKAYQALGRLMTTMDEQLDMIINKMG 485 >gi|30248319|ref|NP_840389.1| flagella basal body rod protein [Nitrosomonas europaea ATCC 19718] gi|30138205|emb|CAD84213.1| Flagella basal body rod protein [Nitrosomonas europaea ATCC 19718] Length = 137 Score = 41.4 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 12/78 (15%), Positives = 28/78 (35%), Gaps = 2/78 (2%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A R ++ N++N DT GF+ F++ + +++ + S +A+ Sbjct: 17 GLRA--TRQELLSGNIANADTPGFKARDFDFAKAMQNVQSPQRVQHSSLATTAPGHIGMA 74 Query: 71 GSFISTGTELDFALEGDA 88 T + + Sbjct: 75 DFRSITSVPKQYRVPQQP 92 >gi|226944498|ref|YP_002799571.1| flagellar hook-associated protein [Azotobacter vinelandii DJ] gi|226719425|gb|ACO78596.1| flagellar hook-associated protein [Azotobacter vinelandii DJ] Length = 541 Score = 41.4 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 11/36 (30%), Positives = 21/36 (58%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTI 37 + F+IG++ A + LST ++N++N T G+ Sbjct: 1 MSIFSIGVSGLNAAQVALSTTSNNITNVYTDGYNRQ 36 >gi|308094613|ref|ZP_05890642.2| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus AN-5034] gi|308090130|gb|EFO39825.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus AN-5034] Length = 172 Score = 41.4 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 6/38 (15%), Positives = 19/38 (50%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 E+ ++ N++ +T G++ + F++ + A + Sbjct: 61 ERNAEVISTNIAQANTPGYKARGLDFAKELQAATSGAS 98 >gi|229166584|ref|ZP_04294336.1| Flagellar basal-body rod protein [Bacillus cereus AH621] gi|228616838|gb|EEK73911.1| Flagellar basal-body rod protein [Bacillus cereus AH621] Length = 161 Score = 41.4 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 20/34 (58%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV 45 L + +TV+ N++N +T G++ V F+E + Sbjct: 38 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQM 71 >gi|88704308|ref|ZP_01102022.1| flagellar basal body rod protein FlgC [Congregibacter litoralis KT71] gi|88701359|gb|EAQ98464.1| flagellar basal body rod protein FlgC [Congregibacter litoralis KT71] Length = 140 Score = 41.4 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 9/96 (9%), Positives = 33/96 (34%), Gaps = 7/96 (7%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKIS 57 + ++ + A RL+T++ N++N + V +R F ++ + + + + Sbjct: 6 AISVAATSLDAQSTRLNTISSNLANANAVSSSAEETYRAQYPVFETMLNELSS-ANGMDA 64 Query: 58 FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE 93 +++ + + + + Sbjct: 65 VAGVRVSGITQSDLPAVKEYVPTHPMADDEGFIYRP 100 Score = 39.5 bits (90), Expect = 0.39, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 20/43 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 GF+ NS+ EM M+ ++ + ++ ++ +L + Sbjct: 95 GFIYRPAINSVEEMANMMEASRSYQDSIEAMNTAKQLILRTLT 137 >gi|15642199|ref|NP_231831.1| flagellar basal body rod protein FlgB [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121586275|ref|ZP_01676065.1| flagellar basal-body rod protein FlgB [Vibrio cholerae 2740-80] gi|121726570|ref|ZP_01679819.1| flagellar basal-body rod protein FlgB [Vibrio cholerae V52] gi|147673875|ref|YP_001217717.1| flagellar basal body rod protein FlgB [Vibrio cholerae O395] gi|153817081|ref|ZP_01969748.1| flagellar basal-body rod protein FlgB [Vibrio cholerae NCTC 8457] gi|153820794|ref|ZP_01973461.1| flagellar basal-body rod protein FlgB [Vibrio cholerae B33] gi|183179562|ref|ZP_02957773.1| flagellar basal-body rod protein FlgB [Vibrio cholerae MZO-3] gi|227082324|ref|YP_002810875.1| flagellar basal-body rod protein FlgB [Vibrio cholerae M66-2] gi|229507723|ref|ZP_04397228.1| flagellar basal-body rod protein FlgB [Vibrio cholerae BX 330286] gi|229512082|ref|ZP_04401561.1| flagellar basal-body rod protein FlgB [Vibrio cholerae B33] gi|229519218|ref|ZP_04408661.1| flagellar basal-body rod protein FlgB [Vibrio cholerae RC9] gi|229607227|ref|YP_002877875.1| flagellar basal body rod protein FlgB [Vibrio cholerae MJ-1236] gi|254849329|ref|ZP_05238679.1| flagellar basal-body rod protein FlgB [Vibrio cholerae MO10] gi|255747101|ref|ZP_05421046.1| flagellar basal-body rod protein FlgB [Vibrio cholera CIRS 101] gi|262161355|ref|ZP_06030465.1| flagellar basal-body rod protein FlgB [Vibrio cholerae INDRE 91/1] gi|262167774|ref|ZP_06035476.1| flagellar basal-body rod protein FlgB [Vibrio cholerae RC27] gi|298500422|ref|ZP_07010227.1| flagellar basal-body rod protein FlgB [Vibrio cholerae MAK 757] gi|9656756|gb|AAF95345.1| flagellar basal-body rod protein FlgB [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121549541|gb|EAX59567.1| flagellar basal-body rod protein FlgB [Vibrio cholerae 2740-80] gi|121631023|gb|EAX63402.1| flagellar basal-body rod protein FlgB [Vibrio cholerae V52] gi|126512349|gb|EAZ74943.1| flagellar basal-body rod protein FlgB [Vibrio cholerae NCTC 8457] gi|126521586|gb|EAZ78809.1| flagellar basal-body rod protein FlgB [Vibrio cholerae B33] gi|146315758|gb|ABQ20297.1| flagellar basal-body rod protein FlgB [Vibrio cholerae O395] gi|183012973|gb|EDT88273.1| flagellar basal-body rod protein FlgB [Vibrio cholerae MZO-3] gi|227010212|gb|ACP06424.1| flagellar basal-body rod protein FlgB [Vibrio cholerae M66-2] gi|227014096|gb|ACP10306.1| flagellar basal-body rod protein FlgB [Vibrio cholerae O395] gi|229343907|gb|EEO08882.1| flagellar basal-body rod protein FlgB [Vibrio cholerae RC9] gi|229352047|gb|EEO16988.1| flagellar basal-body rod protein FlgB [Vibrio cholerae B33] gi|229355228|gb|EEO20149.1| flagellar basal-body rod protein FlgB [Vibrio cholerae BX 330286] gi|229369882|gb|ACQ60305.1| flagellar basal-body rod protein FlgB [Vibrio cholerae MJ-1236] gi|254845034|gb|EET23448.1| flagellar basal-body rod protein FlgB [Vibrio cholerae MO10] gi|255735503|gb|EET90903.1| flagellar basal-body rod protein FlgB [Vibrio cholera CIRS 101] gi|262023839|gb|EEY42538.1| flagellar basal-body rod protein FlgB [Vibrio cholerae RC27] gi|262028666|gb|EEY47320.1| flagellar basal-body rod protein FlgB [Vibrio cholerae INDRE 91/1] gi|297541115|gb|EFH77169.1| flagellar basal-body rod protein FlgB [Vibrio cholerae MAK 757] Length = 131 Score = 41.4 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 8/38 (21%), Positives = 18/38 (47%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 E+ +A N++ +T GF+ + F + + A + Sbjct: 20 ERNSEVIATNIAQANTPGFKAKGMDFQKALQAASSGAS 57 >gi|225871951|ref|YP_002753405.1| flagellar hook-associated protein FlgK [Acidobacterium capsulatum ATCC 51196] gi|225791881|gb|ACO31971.1| flagellar hook-associated protein FlgK [Acidobacterium capsulatum ATCC 51196] Length = 472 Score = 41.4 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 31/236 (13%), Positives = 74/236 (31%), Gaps = 9/236 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +FNI A A + LS V++N++N +T G+ ++ +I+ + V Sbjct: 7 AFNIATGALEADQAALSIVSNNVANANTTGYTREVPV-WQMADSIQINGITYGDGVNMTG 65 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK--- 120 + S + + A + + + + S V S Sbjct: 66 PQSQRSPVLQQSLDQQTQAQSDSAARLSALQQVQGVFSSSISTSSSSTSSTVGISQDLSS 125 Query: 121 ----YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 + L+ + Q + + + +++ S G V + N+ Sbjct: 126 FFSAWSALEANPTQTSLRQGVLSAAANLTSDFNSAAQQLSSQAASVDHQSAGLVTQINNL 185 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ-KFNSITTLIDENE 231 + G LED+ A ++ ++ ++ + Q + + + Sbjct: 186 TAQIAKLNTQISSQSPNSDAGSLEDARATAISQLSALVGVNQIQNQGNSLTLTTTS 241 >gi|260768785|ref|ZP_05877719.1| flagellar basal-body rod protein FlgC [Vibrio furnissii CIP 102972] gi|260616815|gb|EEX42000.1| flagellar basal-body rod protein FlgC [Vibrio furnissii CIP 102972] gi|315180488|gb|ADT87402.1| flagellar basal-body rod protein C [Vibrio furnissii NCTC 11218] Length = 140 Score = 41.4 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 20/43 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ S N + EM M+ T+ F + +++ + +R Sbjct: 94 GYVYHSGINVVNEMADMMSSTRSFEANVEVLNNVKSMQQSLMR 136 Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 27/65 (41%), Gaps = 7/65 (10%) Query: 3 TSFN-IGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQK 55 +A +A RL+T++ N++N D+V ++ +K F+ V ++ Sbjct: 4 NGIYETSGSAMMAQTIRLNTISSNLANADSVASNPNDVYKPLKPVFTSVFNSLSAQSASG 63 Query: 56 ISFVA 60 V Sbjct: 64 SVPVR 68 >gi|257457497|ref|ZP_05622665.1| flagellar hook-associated protein FlgK [Treponema vincentii ATCC 35580] gi|257445120|gb|EEV20195.1| flagellar hook-associated protein FlgK [Treponema vincentii ATCC 35580] Length = 625 Score = 41.4 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 6/41 (14%), Positives = 14/41 (34%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E+ +I +N+ + + + I + Sbjct: 584 SGVNIDEELADIIKFQHGYNATARFVAAVNEMLDTVINRLG 624 >gi|170742313|ref|YP_001770968.1| flagellar hook-associated protein FlgK [Methylobacterium sp. 4-46] gi|168196587|gb|ACA18534.1| flagellar hook-associated protein FlgK [Methylobacterium sp. 4-46] Length = 623 Score = 41.4 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 8/53 (15%), Positives = 22/53 (41%) Query: 187 EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + ++ T + F E S E+ ++I L +++ ++ + +R Sbjct: 570 QKIALSTAQGRFSETSGVTIDEELSRLIQLQSAYSANARVLTAARDVLDTLMR 622 >gi|326319094|ref|YP_004236766.1| flagellar basal-body rod protein FlgB [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375930|gb|ADX48199.1| flagellar basal-body rod protein FlgB [Acidovorax avenae subsp. avenae ATCC 19860] Length = 147 Score = 41.4 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 18/43 (41%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 A + +R +A N++N DT G+ F++ + Sbjct: 14 NALMLRAERQRAIASNIANADTPGYVARDFNFADALRDATGQG 56 >gi|159045918|ref|YP_001534712.1| flagellar hook-associated protein FlgK [Dinoroseobacter shibae DFL 12] gi|157913678|gb|ABV95111.1| flagellar hook-associated protein FlgK [Dinoroseobacter shibae DFL 12] Length = 485 Score = 41.4 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 8/32 (25%), Positives = 16/32 (50%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGF 34 ++ L+ A + S V+ N++N T G+ Sbjct: 5 STLGNALSGLTAASKAASVVSSNIANATTEGY 36 Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats. Identities = 6/73 (8%), Positives = 25/73 (34%), Gaps = 1/73 (1%) Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 + + + T++ LE ++ E+ +++ + + + + Sbjct: 413 SDLLSTIGAARQASENEVSYTAAKWETLRSLELEGG-VDTDAELQKLLMIETAYAANARV 471 Query: 227 IDENEKSMLEAIR 239 I ++ + +R Sbjct: 472 IQTVDEMLDLLLR 484 >gi|313904267|ref|ZP_07837645.1| flagellar basal-body rod protein FlgB [Eubacterium cellulosolvens 6] gi|313470817|gb|EFR66141.1| flagellar basal-body rod protein FlgB [Eubacterium cellulosolvens 6] Length = 131 Score = 41.4 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 8/34 (23%), Positives = 18/34 (52%) Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50 QR + +N++N DT F++ + F + + + Sbjct: 21 QRQNITVNNIANVDTPKFKSQYLTFEDTLASRIR 54 >gi|290894002|ref|ZP_06556977.1| flagellar hook-associated protein FlgK [Listeria monocytogenes FSL J2-071] gi|290556448|gb|EFD89987.1| flagellar hook-associated protein FlgK [Listeria monocytogenes FSL J2-071] Length = 506 Score = 41.4 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 18/42 (42%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46 FN L+ A + N+SN +T G+ V + V G Sbjct: 6 FNTSLSGMSAAQIANMVAQQNISNMNTPGYIRQAVDQTAVYG 47 Score = 37.9 bits (86), Expect = 1.4, Method: Composition-based stats. Identities = 5/35 (14%), Positives = 12/35 (34%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 N EM ++ + + T ++ M + Sbjct: 469 VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALL 503 >gi|27363699|ref|NP_759227.1| flagellar hook-associated protein FlgK [Vibrio vulnificus CMCP6] gi|27359815|gb|AAO08754.1| flagellar hook-associated protein FlgK [Vibrio vulnificus CMCP6] Length = 638 Score = 41.4 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 30/83 (36%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 N+G + L +++L+T N+SN +T G+ V + + Sbjct: 6 LNVGTQSVLTAQRQLNTTGHNISNVNTEGYSRQSVIQATNDPRQFGGSTYGMGVHVENVR 65 Query: 65 YLSKEVGSFISTGTELDFALEGD 87 + + +FA +GD Sbjct: 66 RSWDQFAVNELNLSTTNFANKGD 88 Score = 37.2 bits (84), Expect = 2.1, Method: Composition-based stats. Identities = 5/38 (13%), Positives = 14/38 (36%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S N E M+ Q + + + ++ + ++ Sbjct: 599 SGVNLDEEAANMMRFQQAYMASSRIMQAANDTFNTILQ 636 >gi|315639201|ref|ZP_07894363.1| flagellar hook-associated protein 1 (HAP1) (flgK) [Campylobacter upsaliensis JV21] gi|315480527|gb|EFU71169.1| flagellar hook-associated protein 1 (HAP1) (flgK) [Campylobacter upsaliensis JV21] Length = 608 Score = 41.4 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 12/82 (14%), Positives = 24/82 (29%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 + G+ A E +++T +N+SN + + +V + + Sbjct: 7 LHTGVTGLKASEVQIATTGNNISNANATFYTRQRVVQTTNGYITTGGVQVGTGTAIESIV 66 Query: 65 YLSKEVGSFISTGTELDFALEG 86 L E F G Sbjct: 67 RLHDEHAYFKLKNASTQQEYTG 88 Score = 37.9 bits (86), Expect = 1.4, Method: Composition-based stats. Identities = 4/38 (10%), Positives = 15/38 (39%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N+ E+ +I + + ++ ++ + + Sbjct: 567 KSGVNTNEELAALIQWQSSYGAAAKIVSTVDQMLDTLL 604 >gi|170680262|ref|YP_001742379.1| lateral flagellar hook associated protein 1 [Escherichia coli SMS-3-5] gi|170517980|gb|ACB16158.1| lateral flagellar hook associated protein 1 [Escherichia coli SMS-3-5] Length = 458 Score = 41.4 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 23/78 (29%), Gaps = 2/78 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M NIG + + L+ A N +N T G+ + S + GA + + V Sbjct: 1 MD-MINIGYSGASTAQVELNVTAQNTANAMTTGYTRQVAEISTI-GASGGSPNSAGNGVQ 58 Query: 61 SGKEYLSKEVGSFISTGT 78 Sbjct: 59 VDSIRRVSNQYQVNQVWY 76 >gi|167585200|ref|ZP_02377588.1| flagellar hook-associated protein FlgK [Burkholderia ubonensis Bu] Length = 656 Score = 41.4 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 12/77 (15%), Positives = 27/77 (35%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 N+G++ A L+T ++N++N T G+ + ++E G + Sbjct: 1 MNLGISGLNAAIWGLTTTSNNIANAATPGYTIERPVYAEASGQYTGSGYLPQGVNTVTVQ 60 Query: 65 YLSKEVGSFISTGTELD 81 + S + Sbjct: 61 RQYSQYLSDQLNSAQTQ 77 Score = 38.3 bits (87), Expect = 0.94, Method: Composition-based stats. Identities = 8/72 (11%), Positives = 19/72 (26%) Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 +V + S + + + E S N E ++ Q + + + Sbjct: 581 ANYVNGIGNTASQLKSSNAAQTALVGQITKAQQEVSGVNQNEEAANLMQYQQLYQANAKV 640 Query: 227 IDENEKSMLEAI 238 I + Sbjct: 641 IQTASTLFQTVL 652 >gi|221640803|ref|YP_002527065.1| flagellar hook-associated protein FlgK [Rhodobacter sphaeroides KD131] gi|332559781|ref|ZP_08414103.1| FlgK2 [Rhodobacter sphaeroides WS8N] gi|221161584|gb|ACM02564.1| Flagellar hook-associated protein FlgK [Rhodobacter sphaeroides KD131] gi|332277493|gb|EGJ22808.1| FlgK2 [Rhodobacter sphaeroides WS8N] Length = 481 Score = 41.4 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 11/77 (14%), Positives = 24/77 (31%), Gaps = 3/77 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + + L+ + + ++N++N T GF ++ EV Q + V + Sbjct: 6 ALSNALSGLNVTSRSIENSSNNVANALTEGFARREL---EVTARSYGGGGQGVRTVGIDR 62 Query: 64 EYLSKEVGSFISTGTEL 80 V Sbjct: 63 MVNMALVADRRLADAAT 79 Score = 36.4 bits (82), Expect = 3.4, Method: Composition-based stats. Identities = 4/35 (11%), Positives = 16/35 (45%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 ++ EM Q++ L + + + ++ + + + Sbjct: 445 VDTDREMEQLLLLERAYAANAKVVTACDDLLQYLL 479 >gi|218135314|ref|ZP_03464118.1| hypothetical protein BACPEC_03219 [Bacteroides pectinophilus ATCC 43243] gi|217990699|gb|EEC56710.1| hypothetical protein BACPEC_03219 [Bacteroides pectinophilus ATCC 43243] Length = 512 Score = 41.4 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 16/102 (15%), Positives = 28/102 (27%), Gaps = 4/102 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE----VVGAIKNDIDQKISFV 59 NI A ++T A N+SN +T G+ + S A + Sbjct: 7 GLNIAYTGLQAASVSINTTAHNVSNVNTKGYSRQQTDVSADNALRTYAKYGTAGSGVIVN 66 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101 + + S + S T + + T Sbjct: 67 SIQQVRDSYYDVKYRSNETNYGYYNTMQTYMTQLEDYLNEYT 108 >gi|170021354|ref|YP_001726308.1| flagellar hook-associated protein FlgK [Escherichia coli ATCC 8739] gi|169756282|gb|ACA78981.1| flagellar hook-associated protein FlgK [Escherichia coli ATCC 8739] Length = 458 Score = 41.4 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 23/78 (29%), Gaps = 2/78 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M NIG + + L+ A N +N T G+ + S + GA + + V Sbjct: 1 MD-MINIGYSGASTAQVELNVTAQNTANAMTTGYTRQVAEISTI-GASGGSPNSAGNGVQ 58 Query: 61 SGKEYLSKEVGSFISTGT 78 Sbjct: 59 VDSIRRVSNQYQVNQVWY 76 >gi|310764863|gb|ADP09813.1| Flagellar basal-body rod protein FlgB [Erwinia sp. Ejp617] Length = 147 Score = 41.4 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 23/50 (46%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 A L +R +A N++N DT G+ + FS+ + + S V+ Sbjct: 27 ALSLLSRRQEVLASNIANADTPGYMARDIDFSQQLKNTLANQSMAKSPVS 76 >gi|256830992|ref|YP_003159720.1| hypothetical protein Dbac_3229 [Desulfomicrobium baculatum DSM 4028] gi|256580168|gb|ACU91304.1| protein of unknown function DUF1078 domain protein [Desulfomicrobium baculatum DSM 4028] Length = 123 Score = 41.4 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 28/78 (35%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A + A+N++N +T GF + +V+F + + ASG S E Sbjct: 7 AMQGISFSQQVAANNVANMNTNGFHSSRVEFETGLNGQGVQVQDVYENTASGPLVPSGEY 66 Query: 71 GSFISTGTELDFALEGDA 88 + +EG Sbjct: 67 VETDEGLRYEEMLVEGSN 84 >gi|77464882|ref|YP_354386.1| flagellar hook-associated protein FlgK [Rhodobacter sphaeroides 2.4.1] gi|77389300|gb|ABA80485.1| putative flagellar hook protein [Rhodobacter sphaeroides 2.4.1] Length = 481 Score = 41.4 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 11/77 (14%), Positives = 24/77 (31%), Gaps = 3/77 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + + L+ + + ++N++N T GF ++ EV Q + V + Sbjct: 6 ALSNALSGLNVTSRSIENSSNNVANALTEGFARREL---EVTARSYGGGGQGVRTVGIDR 62 Query: 64 EYLSKEVGSFISTGTEL 80 V Sbjct: 63 MVNMALVADRRLADAAT 79 Score = 36.4 bits (82), Expect = 3.4, Method: Composition-based stats. Identities = 4/35 (11%), Positives = 16/35 (45%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 ++ EM Q++ L + + + ++ + + + Sbjct: 445 VDTDREMEQLLLLERAYAANAKVVTACDDLLQYLL 479 >gi|116872094|ref|YP_848875.1| flagellar hook-associated protein FlgK [Listeria welshimeri serovar 6b str. SLCC5334] gi|116740972|emb|CAK20092.1| flagellar hook-associated protein 1-related protein [Listeria welshimeri serovar 6b str. SLCC5334] Length = 506 Score = 41.4 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 18/42 (42%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46 FN L+ A + N+SN +T G+ V + V G Sbjct: 6 FNTSLSGMSAAQIANMVAQQNISNMNTPGYIRQAVDQTAVYG 47 Score = 37.5 bits (85), Expect = 1.4, Method: Composition-based stats. Identities = 5/35 (14%), Positives = 12/35 (34%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 N EM ++ + + T ++ M + Sbjct: 469 VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALL 503 >gi|88704309|ref|ZP_01102023.1| flagellar basal-body rod protein FlgB [Congregibacter litoralis KT71] gi|88701360|gb|EAQ98465.1| flagellar basal-body rod protein FlgB [Congregibacter litoralis KT71] Length = 146 Score = 41.4 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 29/78 (37%), Gaps = 2/78 (2%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A A + L ++ N++N+DT G++ + F + + D A+ Sbjct: 32 ALRAQKTEL--LSANIANSDTPGYKARDIDFRAAMQSAMGAQDGMTRTHAAHLNASGTPG 89 Query: 71 GSFISTGTELDFALEGDA 88 + +L+G+ Sbjct: 90 STEPMYRIPTQPSLDGNT 107 >gi|261211325|ref|ZP_05925613.1| flagellar basal-body rod protein FlgB [Vibrio sp. RC341] gi|260839280|gb|EEX65906.1| flagellar basal-body rod protein FlgB [Vibrio sp. RC341] Length = 131 Score = 41.4 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 8/38 (21%), Positives = 18/38 (47%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 E+ +A N++ +T GF+ + F + + A + Sbjct: 20 ERNSEVIATNIAQANTPGFKAKGMDFQKALQAASSGAS 57 >gi|254182888|ref|ZP_04889481.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei 1655] gi|184213422|gb|EDU10465.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei 1655] Length = 452 Score = 41.4 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 23/195 (11%), Positives = 50/195 (25%), Gaps = 1/195 (0%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 IG++ A Q L + N +N T G+ V S + + + S Sbjct: 1 MNIIYIGMSGIRAANQSLLAASQNTANIATAGYSRRGVLLSTGLTGGVDASG-LLRLNES 59 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 K + + +P + G+L +ASG Sbjct: 60 YKTQQLWQAAGQYGRYDAAQTYFDQLEALFGGNPVDGKTQANDLGFGKFIGALEAASGDP 119 Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 + + I + ++ + + I + +V+ G + Sbjct: 120 GDSVLRNGVIDAANSMTKQFNNMRSVLTNQLRSIEQQRVTTVEQVNGLAKTVAELNGKIA 179 Query: 182 PPTPLEDLSGVTVKR 196 + + Sbjct: 180 AGQASGADVSALMDQ 194 >gi|47566126|ref|ZP_00237164.1| flagellar basal-body rod protein flgB [Bacillus cereus G9241] gi|47557043|gb|EAL15373.1| flagellar basal-body rod protein flgB [Bacillus cereus G9241] Length = 135 Score = 41.4 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 12/72 (16%), Positives = 29/72 (40%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 L + +TV+ N++N +T G++ V F+E + + + + + Sbjct: 12 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKSNTADLKTNPDLYQTNEM 71 Query: 72 SFISTGTELDFA 83 + T+ +A Sbjct: 72 HLPTVNTKNTYA 83 >gi|328958287|ref|YP_004375673.1| flagellar basal body rod protein FlgB [Carnobacterium sp. 17-4] gi|328674611|gb|AEB30657.1| flagellar basal body rod protein FlgB [Carnobacterium sp. 17-4] Length = 142 Score = 41.4 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 21/43 (48%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 A A R ++ N++N +T ++ KV+F ++ + N Sbjct: 27 NALDAASMRQEMISSNIANVNTADYKVNKVEFESILENVSNGT 69 >gi|311105941|ref|YP_003978794.1| flagellar hook-associated protein FlgK [Achromobacter xylosoxidans A8] gi|310760630|gb|ADP16079.1| flagellar hook-associated protein FlgK [Achromobacter xylosoxidans A8] Length = 555 Score = 41.4 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 11/51 (21%), Positives = 22/51 (43%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 + + L A + L+T + N++N TVG+ +V S ++ Sbjct: 1 MNMYKLALGGLNAAQAGLATTSHNINNATTVGYNRQRVMVSTAGAQATSNG 51 >gi|331671810|ref|ZP_08372606.1| flagellar hook-associated protein FlgK [Escherichia coli TA280] gi|331070799|gb|EGI42158.1| flagellar hook-associated protein FlgK [Escherichia coli TA280] Length = 458 Score = 41.4 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 23/78 (29%), Gaps = 2/78 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M NIG + + L+ A N +N T G+ + S + GA + + V Sbjct: 1 MD-MINIGYSGASTAQVELNVTAQNTANAMTTGYTRQVAEISTI-GASGGSPNSAGNGVQ 58 Query: 61 SGKEYLSKEVGSFISTGT 78 Sbjct: 59 VDSIRRVSNQYQVNQVWY 76 >gi|254470337|ref|ZP_05083741.1| flagellar hook-associated protein, putative [Pseudovibrio sp. JE062] gi|211960648|gb|EEA95844.1| flagellar hook-associated protein, putative [Pseudovibrio sp. JE062] Length = 519 Score = 41.4 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 6/64 (9%), Positives = 22/64 (34%), Gaps = 1/64 (1%) Query: 175 SGISPNIPPTPLEDLSGVTVKRGFLEDS-NANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 S I+ + ++ + E+S + E+ ++ L + + ++ ++ Sbjct: 452 SQIASAATSAESNSKAVTSIAKNAYENSYKVDVDEELVKLTELQNAYAANARVLSAIDEM 511 Query: 234 MLEA 237 Sbjct: 512 YDTL 515 >gi|254299680|ref|ZP_04967129.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei 406e] gi|157809590|gb|EDO86760.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei 406e] Length = 452 Score = 41.4 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 23/195 (11%), Positives = 50/195 (25%), Gaps = 1/195 (0%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 IG++ A Q L + N +N T G+ V S + + + S Sbjct: 1 MNIIYIGMSGIRAANQSLLAASQNTANIATAGYSRRGVLLSTGLTGGVDASG-LLRLNES 59 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 K + + +P + G+L +ASG Sbjct: 60 YKTQQLWQAAGQYGRYDAAQTYFDQLEALFGGNPVDGKTQANDLGFGKFIGALEAASGDP 119 Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 + + I + ++ + + I + +V+ G + Sbjct: 120 GDSVLRNGVIDAANSMTKQFNNMRSVLTNQLRSIEQQRVTTVEQVNGLAKTVAELNGKIA 179 Query: 182 PPTPLEDLSGVTVKR 196 + + Sbjct: 180 AGQASGADVSALMDQ 194 >gi|16764530|ref|NP_460145.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|62179691|ref|YP_216108.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161614603|ref|YP_001588568.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167553038|ref|ZP_02346788.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167994038|ref|ZP_02575130.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168237256|ref|ZP_02662314.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168244773|ref|ZP_02669705.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168264033|ref|ZP_02686006.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168467126|ref|ZP_02700968.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168822617|ref|ZP_02834617.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194445886|ref|YP_002040428.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194449295|ref|YP_002045173.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194737837|ref|YP_002114173.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197250045|ref|YP_002146869.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197262046|ref|ZP_03162120.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|198242083|ref|YP_002215963.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200390920|ref|ZP_03217531.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204930812|ref|ZP_03221685.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205353088|ref|YP_002226889.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207857318|ref|YP_002243969.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224584322|ref|YP_002638120.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238911006|ref|ZP_04654843.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|120293|sp|P16437|FLGB_SALTY RecName: Full=Flagellar basal-body rod protein flgB; AltName: Full=Putative proximal rod protein gi|47669|emb|CAA36309.1| unnamed protein product [Salmonella enterica subsp. enterica serovar Typhimurium] gi|217058|dbj|BAA02861.1| FlgB [Salmonella enterica subsp. enterica serovar Typhimurium] gi|16419691|gb|AAL20104.1| flagellar biosynthesis protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|62127324|gb|AAX65027.1| flagellar biosynthesis, cell-proximal portion of basal-body rod [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161363967|gb|ABX67735.1| hypothetical protein SPAB_02353 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194404549|gb|ACF64771.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194407599|gb|ACF67818.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194713339|gb|ACF92560.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195630354|gb|EDX48980.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197213748|gb|ACH51145.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197240301|gb|EDY22921.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197289757|gb|EDY29118.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197936599|gb|ACH73932.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199603365|gb|EDZ01911.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204320271|gb|EDZ05475.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205272869|emb|CAR37798.1| putative flagellar basal-body rod protein FlgB (proximal rod protein) [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205322410|gb|EDZ10249.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205328023|gb|EDZ14787.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205336425|gb|EDZ23189.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205341041|gb|EDZ27805.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205347333|gb|EDZ33964.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206709121|emb|CAR33454.1| putative flagellar basal-body rod protein FlgB (proximal rod protein) [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224468849|gb|ACN46679.1| flagellar basal body rod protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261246385|emb|CBG24194.1| putative flagellar basal-body rod protein FlgB (proximal rod protein) [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267992948|gb|ACY87833.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157715|emb|CBW17207.1| putative flagellar basal-body rod protein FlgB (proximal rod protein) [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312912161|dbj|BAJ36135.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320086386|emb|CBY96159.1| Flagellar basal-body rod protein flgB putative proximal rod protein [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321223792|gb|EFX48855.1| Flagellar basal-body rod protein FlgB [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322616544|gb|EFY13453.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322620515|gb|EFY17379.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622509|gb|EFY19354.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629660|gb|EFY26435.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322632620|gb|EFY29366.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636885|gb|EFY33588.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641577|gb|EFY38215.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644067|gb|EFY40613.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650032|gb|EFY46450.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653958|gb|EFY50281.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658490|gb|EFY54752.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322663348|gb|EFY59550.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322670082|gb|EFY66222.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674854|gb|EFY70945.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676676|gb|EFY72743.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682598|gb|EFY78617.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686649|gb|EFY82628.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322714161|gb|EFZ05732.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323129444|gb|ADX16874.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323195763|gb|EFZ80939.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198345|gb|EFZ83449.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323203171|gb|EFZ88201.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323209174|gb|EFZ94111.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323209678|gb|EFZ94607.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217866|gb|EGA02581.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323222154|gb|EGA06538.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323224926|gb|EGA09184.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229668|gb|EGA13791.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323232893|gb|EGA16989.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240628|gb|EGA24670.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323242942|gb|EGA26963.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323250259|gb|EGA34148.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323252634|gb|EGA36472.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323258838|gb|EGA42491.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323261027|gb|EGA44620.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266936|gb|EGA50421.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323269977|gb|EGA53426.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326623711|gb|EGE30056.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326628168|gb|EGE34511.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] gi|332988065|gb|AEF07048.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 138 Score = 41.4 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 26/66 (39%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR +A N++N DT G++ + F+ + + ++ VA Sbjct: 15 ALNLRAQRQEILAANIANADTPGYQARDIDFASELKKVMVRGREETGGVALTLTSSHHIP 74 Query: 71 GSFIST 76 +S+ Sbjct: 75 AQAVSS 80 >gi|284920905|emb|CBG33968.1| flagellar hook-associated protein 1 [Escherichia coli 042] Length = 547 Score = 41.4 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGTGG 52 >gi|258511107|ref|YP_003184541.1| hypothetical protein Aaci_1117 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257477833|gb|ACV58152.1| protein of unknown function DUF1078 domain protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 69 Score = 41.4 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 8/37 (21%), Positives = 17/37 (45%) Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 N N +M +I T+ + + T D ++ + A+ Sbjct: 30 NVNLTTQMVDLIQATRAYQANATAFDAAKQMAVTALS 66 Score = 39.1 bits (89), Expect = 0.48, Method: Composition-based stats. Identities = 8/27 (29%), Positives = 16/27 (59%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTD 30 S NI + A + L+ +A+N++N + Sbjct: 6 SMNISASGLAANQLWLNVIANNIANVN 32 >gi|74311643|ref|YP_310062.1| flagellar hook-associated protein FlgK [Shigella sonnei Ss046] gi|73855120|gb|AAZ87827.1| flagellar hook-filament junction protein 1 [Shigella sonnei Ss046] gi|323165592|gb|EFZ51379.1| flagellar hook-associated protein FlgK [Shigella sonnei 53G] Length = 547 Score = 41.4 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|228964727|ref|ZP_04125834.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis serovar sotto str. T04001] gi|228794977|gb|EEM42476.1| Flagellar basal-body rod protein FlgC [Bacillus thuringiensis serovar sotto str. T04001] Length = 128 Score = 41.4 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 5/33 (15%), Positives = 13/33 (39%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG 33 M + N + + + ++N+ N +T Sbjct: 1 MFQAINASGSGLTTARKWMEVTSNNIVNANTTA 33 Score = 38.3 bits (87), Expect = 0.89, Method: Composition-based stats. Identities = 7/37 (18%), Positives = 21/37 (56%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 G++ N + EM ++ + + + T++++ N+K+ Sbjct: 91 GYVRYPNIDVTAEMTNVMVAQKMYEANTSVLNANKKN 127 >gi|170748109|ref|YP_001754369.1| flagellar basal body rod protein FlgC [Methylobacterium radiotolerans JCM 2831] gi|170654631|gb|ACB23686.1| flagellar basal-body rod protein FlgC [Methylobacterium radiotolerans JCM 2831] Length = 138 Score = 41.4 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 8/46 (17%), Positives = 18/46 (39%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G ++ N N + EM M + + + +I + + I + Sbjct: 92 GNVKLPNVNMLIEMADMREANRSYEANLQMIKQTRAMVASIIELLR 137 Score = 41.0 bits (94), Expect = 0.15, Method: Composition-based stats. Identities = 11/101 (10%), Positives = 28/101 (27%), Gaps = 8/101 (7%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQKISFV 59 I + A +RL +A+N++N + G + + F + I + Sbjct: 11 IAGSGMEAQSERLRVIAENIANARSTGQTAGSDPYTRKTITFRTALDRASGTAAVAIRQI 70 Query: 60 A-SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 + + + + + L + Sbjct: 71 GEDKAPFRVEYDPGNPAADADGNVKLPNVNMLIEMADMREA 111 >gi|57505236|ref|ZP_00371165.1| flagellar hook-associated protein 1 (HAP1) (flgK) [Campylobacter upsaliensis RM3195] gi|57016372|gb|EAL53157.1| flagellar hook-associated protein 1 (HAP1) (flgK) [Campylobacter upsaliensis RM3195] Length = 608 Score = 41.4 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 12/82 (14%), Positives = 24/82 (29%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 + G+ A E +++T +N+SN + + +V + + Sbjct: 7 LHTGVTGLKASEVQIATTGNNISNANATFYTRQRVVQTTNGYITTGGVQVGTGTAIESIV 66 Query: 65 YLSKEVGSFISTGTELDFALEG 86 L E F G Sbjct: 67 RLHDEHAYFKLKNASTQQEYTG 88 Score = 37.5 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 4/38 (10%), Positives = 15/38 (39%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N+ E+ +I + + ++ ++ + + Sbjct: 567 KSGVNTNEELAALIQWQSSYGAAAKIVSTVDQMLDTLL 604 >gi|262404543|ref|ZP_06081098.1| flagellar basal-body rod protein FlgB [Vibrio sp. RC586] gi|262349575|gb|EEY98713.1| flagellar basal-body rod protein FlgB [Vibrio sp. RC586] Length = 131 Score = 41.4 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 8/38 (21%), Positives = 17/38 (44%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 E +A N++ +T GF+ + F + + A + Sbjct: 20 EHNSEVIATNIAQANTPGFKAKGMDFQKALQAASSGAS 57 >gi|168234100|ref|ZP_02659158.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194469067|ref|ZP_03075051.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194455431|gb|EDX44270.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205331910|gb|EDZ18674.1| flagellar basal-body rod protein FlgB [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 138 Score = 41.4 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 26/66 (39%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR +A N++N DT G++ + F+ + + ++ VA Sbjct: 15 ALNLRAQRQEILAANIANADTPGYQARDIDFASELKKVMVRGREETGGVALSLTSSHHIP 74 Query: 71 GSFIST 76 +S+ Sbjct: 75 AQAVSS 80 >gi|126176150|ref|YP_001052299.1| flagellar hook-associated protein FlgK [Shewanella baltica OS155] gi|125999355|gb|ABN63430.1| flagellar hook-associated protein FlgK [Shewanella baltica OS155] Length = 457 Score = 41.4 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 10/39 (25%), Positives = 19/39 (48%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 + NIG + LA L+ ++N++N G+ +V Sbjct: 1 MSMLNIGKSGLLASMAALNATSNNVANAMVAGYSRQQVM 39 Score = 40.2 bits (92), Expect = 0.22, Method: Composition-based stats. Identities = 6/39 (15%), Positives = 13/39 (33%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S N E +I Q + + +I ++ + Sbjct: 417 TSGVNPDEEGINLIIYQQSYMANAKVISTADQLFQTMLS 455 >gi|304412502|ref|ZP_07394108.1| flagellar hook-associated protein FlgK [Shewanella baltica OS183] gi|307307161|ref|ZP_07586899.1| flagellar hook-associated protein FlgK [Shewanella baltica BA175] gi|304349144|gb|EFM13556.1| flagellar hook-associated protein FlgK [Shewanella baltica OS183] gi|306910400|gb|EFN40831.1| flagellar hook-associated protein FlgK [Shewanella baltica BA175] Length = 457 Score = 41.4 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 10/39 (25%), Positives = 19/39 (48%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 + NIG + LA L+ ++N++N G+ +V Sbjct: 1 MSMLNIGKSGLLASMAALNATSNNVANAMVAGYSRQQVM 39 Score = 40.2 bits (92), Expect = 0.23, Method: Composition-based stats. Identities = 6/39 (15%), Positives = 13/39 (33%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S N E +I Q + + +I ++ + Sbjct: 417 TSGVNPDEEGINLIIYQQSYMANAKVISTADQLFQTMLS 455 >gi|301051132|ref|ZP_07197963.1| flagellar hook-associated protein FlgK [Escherichia coli MS 185-1] gi|300297216|gb|EFJ53601.1| flagellar hook-associated protein FlgK [Escherichia coli MS 185-1] Length = 425 Score = 41.4 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|259908815|ref|YP_002649171.1| flagellar basal body rod protein FlgB [Erwinia pyrifoliae Ep1/96] gi|224964437|emb|CAX55946.1| Flagellar basal-body rod protein [Erwinia pyrifoliae Ep1/96] gi|283478797|emb|CAY74713.1| Flagellar basal-body rod protein flgB [Erwinia pyrifoliae DSM 12163] gi|310767287|gb|ADP12237.1| flagellar basal body rod protein FlgB [Erwinia sp. Ejp617] Length = 137 Score = 41.4 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 11/65 (16%), Positives = 22/65 (33%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR +A N++N DT G++ + F+ + + S ++ Sbjct: 15 ALNLRAQRQEILASNIANADTPGYQARDIDFASQLTKAVEHGRAQGSGMSLTVTSARHIP 74 Query: 71 GSFIS 75 Sbjct: 75 AETQQ 79 >gi|207110308|ref|ZP_03244470.1| flagellar basal body rod protein FlgG [Helicobacter pylori HPKX_438_CA4C1] Length = 114 Score = 41.4 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 35/114 (30%), Gaps = 6/114 (5%) Query: 93 ESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEI-SQK 151 TR G FK+ + G+LV++ G + + + + Sbjct: 1 MPDGTTAYTRSGNFKLDEQGNLVTSEGYLLIPQITLPEDTTQVNIGVDGTVSVTQGLQTT 60 Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSG-----VTVKRGFLE 200 VI + L + G ++ S + +++GFLE Sbjct: 61 SNVIGQITLANFVNPAGLHSMGDNLFSITNASGDAIVGNPDSQGLGKLRQGFLE 114 >gi|161503738|ref|YP_001570850.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160865085|gb|ABX21708.1| hypothetical protein SARI_01823 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 138 Score = 41.4 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 12/66 (18%), Positives = 26/66 (39%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR +A N++N DT G++ + F+ + + ++ V+ Sbjct: 15 ALNLRAQRQEILAANIANADTPGYQARDIDFASELKKVMVRGREETGGVSLTLTSSHHIP 74 Query: 71 GSFIST 76 +S+ Sbjct: 75 AQAVSS 80 >gi|325474917|gb|EGC78103.1| flagellar hook-associated protein FlgK [Treponema denticola F0402] Length = 623 Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 6/41 (14%), Positives = 14/41 (34%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E+ +I +N+ + + + I + Sbjct: 582 SGVNIDEELSDIIKFQHGYNASARFVSVINEMIDTVINRMG 622 Score = 36.0 bits (81), Expect = 4.5, Method: Composition-based stats. Identities = 10/50 (20%), Positives = 19/50 (38%), Gaps = 3/50 (6%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDIDQKIS 57 + A +Q + T N+SN+ T G+ +V F + + Sbjct: 13 SLFAHQQSIQTAGHNISNSSTKGYTRQRVNLEAFEPIYRPDLTRAETPGQ 62 >gi|306813297|ref|ZP_07447490.1| flagellar hook-associated protein FlgK [Escherichia coli NC101] gi|305854060|gb|EFM54499.1| flagellar hook-associated protein FlgK [Escherichia coli NC101] Length = 458 Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 33/222 (14%), Positives = 66/222 (29%), Gaps = 14/222 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M NIG + + L+ A N +N T G+ + S + GA + + V Sbjct: 1 MD-MINIGYSGASTAQVELNVTAQNTANAMTTGYTRQVAEISTI-GASGGSPNSAGNGVQ 58 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 +S +++ + + S + LT+ D+ SL Sbjct: 59 VDSIR-------RVSNQYQVNQVWYAASDYGYYSTQQEYLTQLEAVLSDDNSSLSGGFDN 111 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKV----IATMGLYSVDMSQGFVRRENSG 176 + + + E G +S + I + + Q V + N+ Sbjct: 112 FFAALNEATTSPDDSALREQVISEAGALSLRIDNTLDYIDSQSTEIISQQQAMVSQINTL 171 Query: 177 ISPNIPPTPLEDLSGVTV-KRGFLEDSNANSMYEMGQMIHLT 217 S + L D+ + E+ M+ + Sbjct: 172 TSGIASYNQQIAQAEANGDNASALYDARDQMVEELSGMMDVQ 213 >gi|213418634|ref|ZP_03351700.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 142 Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 9/52 (17%), Positives = 23/52 (44%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+TV++N++N + G+ ++ + Sbjct: 1 MSSLINHAMSGLNAAQAALNTVSNNINNYNVAGYTRQTTILAQANSTLGAGG 52 >gi|77460472|ref|YP_349979.1| flagellar basal body rod protein FlgB [Pseudomonas fluorescens Pf0-1] gi|77384475|gb|ABA75988.1| putative flagellar basal-body rod protein FlgB (proximal rod protein) [Pseudomonas fluorescens Pf0-1] Length = 135 Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 13/98 (13%), Positives = 34/98 (34%), Gaps = 3/98 (3%) Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76 QR +A+N++N DT ++ ++FS+V+ A + + + S+ + + Sbjct: 21 QRAEVLANNIANADTPNYKARDLEFSKVLEA---QSQKNANGTIALNMTNSRHIEAEGLG 77 Query: 77 GTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSL 114 + +++ + G Sbjct: 78 NGDESLMYRTPMQPSIDQNTVDAQLEQSNYAENAVGFQ 115 >gi|126463724|ref|YP_001044838.1| flagellar hook-associated protein FlgK [Rhodobacter sphaeroides ATCC 17029] gi|126105388|gb|ABN78066.1| flagellar hook-associated protein FlgK [Rhodobacter sphaeroides ATCC 17029] Length = 481 Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 11/77 (14%), Positives = 24/77 (31%), Gaps = 3/77 (3%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + + L+ + + ++N++N T GF ++ EV Q + V + Sbjct: 6 ALSNALSGLNVTSRSIENSSNNVANALTEGFARREL---EVTARSYGGGGQGVRTVGIDR 62 Query: 64 EYLSKEVGSFISTGTEL 80 V Sbjct: 63 MMNMALVADRRLADAAT 79 Score = 36.4 bits (82), Expect = 3.7, Method: Composition-based stats. Identities = 4/35 (11%), Positives = 16/35 (45%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 ++ EM Q++ L + + + ++ + + + Sbjct: 445 VDTDREMEQLLLLERAYAANAKVVTACDDLLQYLL 479 >gi|315453582|ref|YP_004073852.1| putative flagellar hook-associated protein [Helicobacter felis ATCC 49179] gi|315132634|emb|CBY83262.1| putative flagellar hook-associated protein [Helicobacter felis ATCC 49179] Length = 606 Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 15/37 (40%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S ++ EM +I + + +I ++ + + Sbjct: 566 SGVSTDEEMVNLIKYQGGYAANAKVITAIDRMIETLL 602 Score = 39.1 bits (89), Expect = 0.49, Method: Composition-based stats. Identities = 6/29 (20%), Positives = 12/29 (41%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTD 30 +S N A + + +N+SN + Sbjct: 5 LSSLNTSYTGLQAHQVMVDVTGNNISNAN 33 >gi|90577342|ref|ZP_01233153.1| flagellar basal body rod protein [Vibrio angustum S14] gi|90440428|gb|EAS65608.1| flagellar basal body rod protein [Vibrio angustum S14] Length = 144 Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 19/43 (44%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ + + + EM M+ T+ F + ++ + +R Sbjct: 97 GYVYYPDIDVVAEMADMMSATRSFETNVEVLSNVKSMQQGLLR 139 Score = 38.3 bits (87), Expect = 0.91, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 6/71 (8%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKISFVA 60 I +A A RL+TVA N++N D V ++ +K F+ V + DQ A Sbjct: 9 IAGSAMNAQTIRLNTVASNLANADAVAANPNDAYKALKPVFATVYNKTQLTGDQADYPSA 68 Query: 61 SGKEYLSKEVG 71 + + Sbjct: 69 EVRIMDVVQHA 79 >gi|300716215|ref|YP_003741018.1| flagellar basal-body rod protein [Erwinia billingiae Eb661] gi|299062051|emb|CAX59167.1| Flagellar basal-body rod protein [Erwinia billingiae Eb661] Length = 137 Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 11/65 (16%), Positives = 24/65 (36%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR +A N++N DT G++ + F+ + + + S ++ Sbjct: 15 ALNLRAQRQEILASNIANADTPGYQARDIDFASQMNKVMEQGRAEGSGLSLAVTSARHIP 74 Query: 71 GSFIS 75 + Sbjct: 75 AETLQ 79 >gi|228952123|ref|ZP_04114218.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229043497|ref|ZP_04191207.1| Flagellar basal-body rod protein [Bacillus cereus AH676] gi|229109200|ref|ZP_04238799.1| Flagellar basal-body rod protein [Bacillus cereus Rock1-15] gi|229127069|ref|ZP_04256068.1| Flagellar basal-body rod protein [Bacillus cereus BDRD-Cer4] gi|229144355|ref|ZP_04272761.1| Flagellar basal-body rod protein [Bacillus cereus BDRD-ST24] gi|228639142|gb|EEK95566.1| Flagellar basal-body rod protein [Bacillus cereus BDRD-ST24] gi|228656422|gb|EEL12261.1| Flagellar basal-body rod protein [Bacillus cereus BDRD-Cer4] gi|228674210|gb|EEL29455.1| Flagellar basal-body rod protein [Bacillus cereus Rock1-15] gi|228725875|gb|EEL77122.1| Flagellar basal-body rod protein [Bacillus cereus AH676] gi|228807655|gb|EEM54179.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 147 Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 29/72 (40%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 L + +TV+ N++N +T G++ V F+E + + + S + Sbjct: 24 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNEM 83 Query: 72 SFISTGTELDFA 83 + T+ +A Sbjct: 84 HLPTVNTKNTYA 95 >gi|229149945|ref|ZP_04278173.1| Flagellar basal-body rod protein [Bacillus cereus m1550] gi|228633626|gb|EEK90227.1| Flagellar basal-body rod protein [Bacillus cereus m1550] Length = 147 Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 29/72 (40%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 L + +TV+ N++N +T G++ V F+E + + + S + Sbjct: 24 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNEM 83 Query: 72 SFISTGTELDFA 83 + T+ +A Sbjct: 84 HLPTVNTKNTYA 95 >gi|218549190|ref|YP_002382981.1| flagellar hook-associated protein FlgK [Escherichia fergusonii ATCC 35469] gi|218356731|emb|CAQ89359.1| flagellar hook-filament junction protein 1 [Escherichia fergusonii ATCC 35469] Length = 548 Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLSAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|90415312|ref|ZP_01223246.1| flagellar protein [marine gamma proteobacterium HTCC2207] gi|90332635|gb|EAS47805.1| flagellar protein [marine gamma proteobacterium HTCC2207] Length = 1001 Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 26/52 (50%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M +IG A Q LSTV++N++N +T G+ + SE + + + Sbjct: 1 MADILSIGAGATQLYRQALSTVSNNIANLNTEGYSRQVSETSENAPSQQGTV 52 >gi|188492642|ref|ZP_02999912.1| flagellar hook-associated protein FlgK [Escherichia coli 53638] gi|188487841|gb|EDU62944.1| flagellar hook-associated protein FlgK [Escherichia coli 53638] Length = 458 Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 23/78 (29%), Gaps = 2/78 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M NIG + + L+ A N +N T G+ + S + GA + + V Sbjct: 1 MD-MINIGYSGASTAQVELNVTAQNTANAMTTGYTRQVAEISTI-GASGGSPNSAGNGVQ 58 Query: 61 SGKEYLSKEVGSFISTGT 78 Sbjct: 59 VDSIRRVSNQYQVNQVWY 76 >gi|324113877|gb|EGC07851.1| flagellar hook protein FlgK [Escherichia fergusonii B253] Length = 548 Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLSAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|323175237|gb|EFZ60850.1| flagellar hook-associated protein FlgK [Escherichia coli LT-68] Length = 547 Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|308173580|ref|YP_003920285.1| flagellar component of cell-proximal portion of basal-body rod [Bacillus amyloliquefaciens DSM 7] gi|307606444|emb|CBI42815.1| flagellar component of cell-proximal portion of basal-body rod [Bacillus amyloliquefaciens DSM 7] gi|328911721|gb|AEB63317.1| flagellar component of cell-proximal portion of basal-body rod [Bacillus amyloliquefaciens LL3] Length = 129 Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 7/35 (20%), Positives = 19/35 (54%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 + + +N++N DT ++ KV F ++ +++ Sbjct: 21 KQKVITNNIANIDTPNYKAKKVSFRNLLDQETSNL 55 >gi|300918686|ref|ZP_07135266.1| flagellar hook-associated protein FlgK [Escherichia coli MS 115-1] gi|300414160|gb|EFJ97470.1| flagellar hook-associated protein FlgK [Escherichia coli MS 115-1] Length = 547 Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|291484169|dbj|BAI85244.1| flagellar basal body rod protein FlgB [Bacillus subtilis subsp. natto BEST195] Length = 129 Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 20/43 (46%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 A + + + +N++N DT ++ KV F ++ + + Sbjct: 13 NALSRADIKQKVITNNIANIDTPNYKAKKVSFQNLLDQESSRL 55 >gi|291282102|ref|YP_003498920.1| Flagellar hook-associated protein FlgK [Escherichia coli O55:H7 str. CB9615] gi|290761975|gb|ADD55936.1| Flagellar hook-associated protein FlgK [Escherichia coli O55:H7 str. CB9615] Length = 547 Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|258622485|ref|ZP_05717507.1| Flagellar basal-body rod protein flgB [Vibrio mimicus VM573] gi|258625237|ref|ZP_05720149.1| Flagellar basal-body rod protein flgB [Vibrio mimicus VM603] gi|262173351|ref|ZP_06041028.1| flagellar basal-body rod protein FlgB [Vibrio mimicus MB-451] gi|258582484|gb|EEW07321.1| Flagellar basal-body rod protein flgB [Vibrio mimicus VM603] gi|258585185|gb|EEW09912.1| Flagellar basal-body rod protein flgB [Vibrio mimicus VM573] gi|261890709|gb|EEY36696.1| flagellar basal-body rod protein FlgB [Vibrio mimicus MB-451] Length = 120 Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 15/85 (17%), Positives = 26/85 (30%), Gaps = 1/85 (1%) Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76 QR +A N++N DT G+ + F+ V+ + E Sbjct: 21 QRTKVLASNLANVDTPGYLAKDLSFTTVMNQTGSGS-VHEPVPKFQVETKYSVPYQNSKD 79 Query: 77 GTELDFALEGDAWFALESPRGIILT 101 G + +E + LT Sbjct: 80 GNTAELGIEQAKFTQNNMDFQTSLT 104 >gi|228938857|ref|ZP_04101457.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228971738|ref|ZP_04132359.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228978347|ref|ZP_04138724.1| Flagellar basal-body rod protein [Bacillus thuringiensis Bt407] gi|228781364|gb|EEM29565.1| Flagellar basal-body rod protein [Bacillus thuringiensis Bt407] gi|228787828|gb|EEM35786.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228820706|gb|EEM66731.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 147 Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 29/72 (40%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 L + +TV+ N++N +T G++ V F+E + + + S + Sbjct: 24 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNEM 83 Query: 72 SFISTGTELDFA 83 + T+ +A Sbjct: 84 HLPTVNTKNTYA 95 >gi|261339382|ref|ZP_05967240.1| flagellar hook-associated protein FlgK [Enterobacter cancerogenus ATCC 35316] gi|288318183|gb|EFC57121.1| flagellar hook-associated protein FlgK [Enterobacter cancerogenus ATCC 35316] Length = 547 Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 9/52 (17%), Positives = 21/52 (40%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+TV++N+S+ + G+ + Sbjct: 1 MSSLINSAMSGLSAAQAALNTVSNNISSYNVAGYTRQTTILGASNSTLTGGG 52 >gi|163738040|ref|ZP_02145456.1| Flagellar hook-associated protein [Phaeobacter gallaeciensis BS107] gi|161388656|gb|EDQ13009.1| Flagellar hook-associated protein [Phaeobacter gallaeciensis BS107] Length = 482 Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 31/93 (33%), Gaps = 5/93 (5%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 ++ N + A + S V++N+SN T G+ + D + Sbjct: 5 SALNSAMTGLTAAGRSTSVVSENLSNVLTPGYSR-----RSLALTSAGDGFSGVKVGHVQ 59 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESP 95 + S S +E+ A A+F + Sbjct: 60 RINDPALQSSVRSANSEVGVAEVKSAFFGRMTE 92 Score = 40.2 bits (92), Expect = 0.23, Method: Composition-based stats. Identities = 20/175 (11%), Positives = 53/175 (30%), Gaps = 3/175 (1%) Query: 67 SKEVGSFISTGTELDFALEGDA--WFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVL 124 + + T T D + D +F + GI + K+ G + + + Sbjct: 308 RFQDPALDPTLTATDPGIFTDQGAFFDPANTVGIANRIELNDKIAMQGQAETWRLRDGLN 367 Query: 125 DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT 184 + + + + + T L + +S + R + Sbjct: 368 AASPGNAGDATLLRGYADALDAKRTVSSVGLGTANLDASTLSANLLSRFAQSENSAEQNV 427 Query: 185 PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + + + L +S E+ +I + + + + +I ++ M +R Sbjct: 428 AFAAATYTEMYQRELAQG-VDSDAELQNLIVIEKVYQANARMISVVDELMETLLR 481 >gi|331645424|ref|ZP_08346528.1| flagellar hook-associated protein FlgK [Escherichia coli M605] gi|59889786|emb|CAH19142.1| Lateral flagellar hook associated protein 1 (FlgK-like) [Escherichia coli] gi|284920050|emb|CBG33107.1| lateral flagellar hook associated protein 1 (FlgK-like) [Escherichia coli 042] gi|331045586|gb|EGI17712.1| flagellar hook-associated protein FlgK [Escherichia coli M605] Length = 458 Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 23/78 (29%), Gaps = 2/78 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M NIG + + L+ A N +N T G+ + S + GA + + V Sbjct: 1 MD-MINIGYSGASTAQVELNVTAQNTANAMTTGYTRQVAEISTI-GASGGSPNSAGNGVQ 58 Query: 61 SGKEYLSKEVGSFISTGT 78 Sbjct: 59 VDSIRRVSNQYQVNQVWY 76 >gi|194432475|ref|ZP_03064762.1| flagellar hook-associated protein FlgK [Shigella dysenteriae 1012] gi|194419362|gb|EDX35444.1| flagellar hook-associated protein FlgK [Shigella dysenteriae 1012] gi|332092937|gb|EGI98005.1| flagellar hook-associated protein FlgK [Shigella dysenteriae 155-74] Length = 547 Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|330447901|ref|ZP_08311549.1| flagellar basal-body rod protein FlgC [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328492092|dbj|GAA06046.1| flagellar basal-body rod protein FlgC [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 144 Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 19/43 (44%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ + + + EM M+ T+ F + ++ + +R Sbjct: 97 GYVYYPDIDVVAEMADMMSATRSFETNVEVLSNVKSMQQGLLR 139 Score = 35.2 bits (79), Expect = 7.8, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 6/71 (8%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKISFVA 60 I +A A RL+TVA N++N D V ++ +K F+ V G + +Q A Sbjct: 9 IAGSAMNAQTIRLNTVASNLANADAVAANPDDAYQALKPVFATVYGKTQLTGEQANYPSA 68 Query: 61 SGKEYLSKEVG 71 + + Sbjct: 69 EVRIMDVVQHA 79 >gi|320179217|gb|EFW54175.1| Flagellar hook-associated protein FlgK [Shigella boydii ATCC 9905] gi|332089154|gb|EGI94263.1| flagellar hook-associated protein FlgK [Shigella boydii 5216-82] Length = 547 Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|315618252|gb|EFU98842.1| flagellar hook-associated protein FlgK [Escherichia coli 3431] Length = 547 Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|331682584|ref|ZP_08383203.1| flagellar hook-associated protein FlgK [Escherichia coli H299] gi|331080215|gb|EGI51394.1| flagellar hook-associated protein FlgK [Escherichia coli H299] Length = 547 Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|293433372|ref|ZP_06661800.1| flagellar hook-associated protein FlgK [Escherichia coli B088] gi|291324191|gb|EFE63613.1| flagellar hook-associated protein FlgK [Escherichia coli B088] Length = 547 Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|218694616|ref|YP_002402283.1| flagellar hook-associated protein FlgK [Escherichia coli 55989] gi|307310140|ref|ZP_07589790.1| flagellar hook-associated protein FlgK [Escherichia coli W] gi|218351348|emb|CAU97054.1| flagellar hook-filament junction protein 1 [Escherichia coli 55989] gi|306909858|gb|EFN40352.1| flagellar hook-associated protein FlgK [Escherichia coli W] gi|315060360|gb|ADT74687.1| flagellar hook-filament junction protein 1 [Escherichia coli W] gi|320200978|gb|EFW75562.1| Flagellar hook-associated protein FlgK [Escherichia coli EC4100B] gi|323379079|gb|ADX51347.1| flagellar hook-associated protein FlgK [Escherichia coli KO11] Length = 547 Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|118589984|ref|ZP_01547388.1| flagellar basal-body rod protein B [Stappia aggregata IAM 12614] gi|118437481|gb|EAV44118.1| flagellar basal-body rod protein B [Stappia aggregata IAM 12614] Length = 126 Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 12/67 (17%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Query: 15 LEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIKNDIDQKISFVASGKEYLSKEVGSF 73 L R +T+A+N++N +T GFR+ ++ F+ V+ + + +++ Sbjct: 17 LSVRQATIAENIANANTPGFRSKDLEPFTTVISRTQLAMTATHDGHLGQTMEAARKSDVE 76 Query: 74 ISTGTEL 80 + + Sbjct: 77 KADSWTV 83 >gi|91792661|ref|YP_562312.1| flagellar basal body rod protein FlgB [Shewanella denitrificans OS217] gi|91714663|gb|ABE54589.1| flagellar basal-body rod protein FlgB [Shewanella denitrificans OS217] Length = 132 Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 9/59 (15%), Positives = 23/59 (38%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFI 74 QR ++ N++N +T ++ V F+ + + ++ S K + + Sbjct: 20 SQRAEVLSSNIANANTPHYKAQDVDFASAMQSARSHQKGLSMSNTSEKHFDLTSLTQQH 78 >gi|82544453|ref|YP_408400.1| flagellar hook-associated protein FlgK [Shigella boydii Sb227] gi|81245864|gb|ABB66572.1| hook-filament junction protein 1 [Shigella boydii Sb227] gi|320173535|gb|EFW48731.1| Flagellar hook-associated protein FlgK [Shigella dysenteriae CDC 74-1112] gi|332094064|gb|EGI99116.1| flagellar hook-associated protein FlgK [Shigella boydii 3594-74] Length = 547 Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|148546713|ref|YP_001266815.1| flagellar hook-associated protein FlgK [Pseudomonas putida F1] gi|148510771|gb|ABQ77631.1| flagellar hook-associated protein FlgK [Pseudomonas putida F1] Length = 676 Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 17/133 (12%), Positives = 37/133 (27%), Gaps = 1/133 (0%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + NIG++ A + + T+ +N++N D + + G + S Sbjct: 1 MASLINIGMSGLGAAQSGMYTLGNNIANADVESYSRQQNVQKTKGGQQVGQVF-IGSGTT 59 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 T + E ++ +P L+ S ++ Sbjct: 60 LADVRRVYNAFIENQLRTTTSLSSEASSYLDQITPLDTSLSSSDTGITAALQSFFTSMQD 119 Query: 121 YPVLDMASVPIQI 133 Q+ Sbjct: 120 AAAKPTEDASRQL 132 >gi|260222464|emb|CBA32054.1| Flagellar basal-body rod protein flgB [Curvibacter putative symbiont of Hydra magnipapillata] Length = 166 Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 13/104 (12%), Positives = 31/104 (29%), Gaps = 4/104 (3%) Query: 1 MQTSFNIGLA----AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56 M ++ L + +R +A N++N DT G+ F + + + + Sbjct: 21 MFSNLTNALDFQSKGLVLRAERQRVIASNIANADTPGYSGRDFDFKKAMAEATSGPTIAL 80 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL 100 + +SG I ++ + + Sbjct: 81 APPSSGTPADGTTNNRHIPLTPIEGSSIGDNNKLGYTIQTQPAM 124 >gi|256018661|ref|ZP_05432526.1| flagellar hook-associated protein FlgK [Shigella sp. D9] gi|332279730|ref|ZP_08392143.1| flagellar hook-filament junction protein 1 [Shigella sp. D9] gi|323185795|gb|EFZ71156.1| flagellar hook-associated protein FlgK [Escherichia coli 1357] gi|324117347|gb|EGC11254.1| flagellar hook protein FlgK [Escherichia coli E1167] gi|332102082|gb|EGJ05428.1| flagellar hook-filament junction protein 1 [Shigella sp. D9] Length = 547 Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|315296713|gb|EFU56008.1| flagellar hook-associated protein FlgK [Escherichia coli MS 16-3] Length = 547 Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|296534169|ref|ZP_06896661.1| flagellar hook-associated protein FlgK [Roseomonas cervicalis ATCC 49957] gi|296265505|gb|EFH11638.1| flagellar hook-associated protein FlgK [Roseomonas cervicalis ATCC 49957] Length = 500 Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 17/42 (40%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44 ++ + ++L A N++N DT G+ V V Sbjct: 5 SALLTATSGLRLTTRQLEQSAQNIANADTAGYTRKTVSGEAV 46 >gi|256020234|ref|ZP_05434099.1| flagellar hook-associated protein FlgK [Shigella sp. D9] gi|300817263|ref|ZP_07097481.1| flagellar hook-associated protein FlgK [Escherichia coli MS 107-1] gi|332281396|ref|ZP_08393809.1| lateral flagellar hook associated protein 1 [Shigella sp. D9] gi|300530239|gb|EFK51301.1| flagellar hook-associated protein FlgK [Escherichia coli MS 107-1] gi|332103748|gb|EGJ07094.1| lateral flagellar hook associated protein 1 [Shigella sp. D9] Length = 458 Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 23/78 (29%), Gaps = 2/78 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M NIG + + L+ A N +N T G+ + S + GA + + V Sbjct: 1 MD-MINIGYSGASTAQVELNVTAQNTANAMTTGYTRQVAEISTI-GASGGSPNSAGNGVQ 58 Query: 61 SGKEYLSKEVGSFISTGT 78 Sbjct: 59 VDSIRRVSNQYQVNQVWY 76 >gi|194014328|ref|ZP_03052945.1| flagellar basal-body rod protein FlgB [Bacillus pumilus ATCC 7061] gi|194013354|gb|EDW22919.1| flagellar basal-body rod protein FlgB [Bacillus pumilus ATCC 7061] Length = 131 Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 7/36 (19%), Positives = 19/36 (52%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV 45 A + +++N++N DT +++ V F +++ Sbjct: 15 NALGRANVKQKVISNNIANIDTPNYKSKNVAFHDML 50 >gi|170683657|ref|YP_001744098.1| flagellar hook-associated protein FlgK [Escherichia coli SMS-3-5] gi|170521375|gb|ACB19553.1| flagellar hook-associated protein FlgK [Escherichia coli SMS-3-5] Length = 547 Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|91210234|ref|YP_540220.1| flagellar hook-associated protein FlgK [Escherichia coli UTI89] gi|117623268|ref|YP_852181.1| flagellar hook-associated protein FlgK [Escherichia coli APEC O1] gi|218557964|ref|YP_002390877.1| flagellar hook-associated protein FlgK [Escherichia coli S88] gi|237706932|ref|ZP_04537413.1| hook-filament junction protein FlgK [Escherichia sp. 3_2_53FAA] gi|306814069|ref|ZP_07448242.1| flagellar hook-associated protein FlgK [Escherichia coli NC101] gi|91071808|gb|ABE06689.1| hook-filament junction protein 1 [Escherichia coli UTI89] gi|115512392|gb|ABJ00467.1| hook-filament junction protein FlgK [Escherichia coli APEC O1] gi|218364733|emb|CAR02423.1| flagellar hook-filament junction protein 1 [Escherichia coli S88] gi|226898142|gb|EEH84401.1| hook-filament junction protein FlgK [Escherichia sp. 3_2_53FAA] gi|294491481|gb|ADE90237.1| flagellar hook-associated protein FlgK [Escherichia coli IHE3034] gi|305852706|gb|EFM53154.1| flagellar hook-associated protein FlgK [Escherichia coli NC101] gi|307627448|gb|ADN71752.1| flagellar hook-associated protein FlgK [Escherichia coli UM146] gi|315287426|gb|EFU46837.1| flagellar hook-associated protein FlgK [Escherichia coli MS 110-3] gi|323953232|gb|EGB49098.1| flagellar hook protein FlgK [Escherichia coli H252] gi|323957906|gb|EGB53618.1| flagellar hook protein FlgK [Escherichia coli H263] Length = 547 Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|51246505|ref|YP_066389.1| flagellar basal-body rod protein (FlgB) [Desulfotalea psychrophila LSv54] gi|50877542|emb|CAG37382.1| related to flagellar basal-body rod protein (FlgB) [Desulfotalea psychrophila LSv54] Length = 137 Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 6/26 (23%), Positives = 14/26 (53%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSE 43 + ++ N++N +T G+ + F E Sbjct: 24 KQEVISSNIANAETPGYAARRFNFEE 49 >gi|27363708|ref|NP_759236.1| flagellar basal body rod protein FlgB [Vibrio vulnificus CMCP6] gi|37679144|ref|NP_933753.1| flagellar basal body rod protein FlgB [Vibrio vulnificus YJ016] gi|320157112|ref|YP_004189491.1| flagellar basal-body rod protein FlgB [Vibrio vulnificus MO6-24/O] gi|27359824|gb|AAO08763.1| flagellar basal-body rod protein FlgB [Vibrio vulnificus CMCP6] gi|37197886|dbj|BAC93724.1| flagellar basal body protein FlgB [Vibrio vulnificus YJ016] gi|319932424|gb|ADV87288.1| flagellar basal-body rod protein FlgB [Vibrio vulnificus MO6-24/O] Length = 131 Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 7/38 (18%), Positives = 19/38 (50%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 E+ ++ N++ +T G++ + FS+ + A + Sbjct: 20 ERNAEVISTNIAQANTPGYKARGLDFSKELQAASSGAS 57 >gi|16078681|ref|NP_389500.1| flagellar basal body rod protein FlgB [Bacillus subtilis subsp. subtilis str. 168] gi|221309493|ref|ZP_03591340.1| flagellar basal body rod protein FlgB [Bacillus subtilis subsp. subtilis str. 168] gi|221313818|ref|ZP_03595623.1| flagellar basal body rod protein FlgB [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221318742|ref|ZP_03600036.1| flagellar basal body rod protein FlgB [Bacillus subtilis subsp. subtilis str. JH642] gi|221323013|ref|ZP_03604307.1| flagellar basal body rod protein FlgB [Bacillus subtilis subsp. subtilis str. SMY] gi|120292|sp|P24500|FLGB_BACSU RecName: Full=Flagellar basal-body rod protein flgB gi|142915|gb|AAA22441.1| flgB [Bacillus subtilis] gi|2633990|emb|CAB13491.1| flagellar component of cell-proximal portion of basal-body rod [Bacillus subtilis subsp. subtilis str. 168] Length = 129 Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 20/43 (46%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 A + + + +N++N DT ++ KV F ++ + + Sbjct: 13 NALSRADIKQKVITNNIANIDTPNYKAKKVSFQNLLDQESSRL 55 >gi|157159090|ref|YP_001462316.1| flagellar hook-associated protein FlgK [Escherichia coli E24377A] gi|209918336|ref|YP_002292420.1| flagellar hook-associated protein FlgK [Escherichia coli SE11] gi|218553660|ref|YP_002386573.1| flagellar hook-associated protein FlgK [Escherichia coli IAI1] gi|300821137|ref|ZP_07101286.1| flagellar hook-associated protein FlgK [Escherichia coli MS 119-7] gi|331676873|ref|ZP_08377569.1| flagellar hook-associated protein FlgK [Escherichia coli H591] gi|157081120|gb|ABV20828.1| flagellar hook-associated protein FlgK [Escherichia coli E24377A] gi|209911595|dbj|BAG76669.1| flagellar hook-filament junction protein 1 FlgK [Escherichia coli SE11] gi|218360428|emb|CAQ97982.1| flagellar hook-filament junction protein 1 [Escherichia coli IAI1] gi|300526436|gb|EFK47505.1| flagellar hook-associated protein FlgK [Escherichia coli MS 119-7] gi|323947616|gb|EGB43620.1| flagellar hook-associated protein FlgK [Escherichia coli H120] gi|324017414|gb|EGB86633.1| flagellar hook-associated protein FlgK [Escherichia coli MS 117-3] gi|331075562|gb|EGI46860.1| flagellar hook-associated protein FlgK [Escherichia coli H591] Length = 547 Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|16129045|ref|NP_415600.1| flagellar hook-filament junction protein 1 [Escherichia coli str. K-12 substr. MG1655] gi|89107928|ref|AP_001708.1| flagellar hook-filament junction protein 1 [Escherichia coli str. K-12 substr. W3110] gi|170080733|ref|YP_001730053.1| flagellar hook-filament junction protein 1 [Escherichia coli str. K-12 substr. DH10B] gi|238900336|ref|YP_002926132.1| flagellar hook-filament junction protein 1 [Escherichia coli BW2952] gi|256023220|ref|ZP_05437085.1| flagellar hook-associated protein FlgK [Escherichia sp. 4_1_40B] gi|307137717|ref|ZP_07497073.1| flagellar hook-associated protein FlgK [Escherichia coli H736] gi|331641626|ref|ZP_08342761.1| flagellar hook-associated protein FlgK [Escherichia coli H736] gi|2506419|sp|P33235|FLGK_ECOLI RecName: Full=Flagellar hook-associated protein 1; Short=HAP1 gi|1651528|dbj|BAA35891.1| flagellar hook-filament junction protein 1 [Escherichia coli str. K12 substr. W3110] gi|1787323|gb|AAC74166.1| flagellar hook-filament junction protein 1 [Escherichia coli str. K-12 substr. MG1655] gi|169888568|gb|ACB02275.1| flagellar hook-filament junction protein 1 [Escherichia coli str. K-12 substr. DH10B] gi|238861110|gb|ACR63108.1| flagellar hook-filament junction protein 1 [Escherichia coli BW2952] gi|260449778|gb|ACX40200.1| flagellar hook-associated protein FlgK [Escherichia coli DH1] gi|315135714|dbj|BAJ42873.1| flagellar hook-associated protein FlgK [Escherichia coli DH1] gi|323937822|gb|EGB34086.1| flagellar hook-associated protein FlgK [Escherichia coli E1520] gi|331038424|gb|EGI10644.1| flagellar hook-associated protein FlgK [Escherichia coli H736] Length = 547 Score = 41.0 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|308050375|ref|YP_003913941.1| flagellar basal-body rod protein FlgB [Ferrimonas balearica DSM 9799] gi|307632565|gb|ADN76867.1| flagellar basal-body rod protein FlgB [Ferrimonas balearica DSM 9799] Length = 131 Score = 41.0 bits (94), Expect = 0.14, Method: Composition-based stats. Identities = 7/34 (20%), Positives = 17/34 (50%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51 R ++ N++N DT ++ + F + + K+ Sbjct: 22 RAEVLSSNIANADTPNYKAQDLDFEQALAGAKSR 55 >gi|312115251|ref|YP_004012847.1| flagellar basal-body rod protein FlgC [Rhodomicrobium vannielii ATCC 17100] gi|311220380|gb|ADP71748.1| flagellar basal-body rod protein FlgC [Rhodomicrobium vannielii ATCC 17100] Length = 139 Score = 41.0 bits (94), Expect = 0.14, Method: Composition-based stats. Identities = 15/109 (13%), Positives = 34/109 (31%), Gaps = 11/109 (10%) Query: 1 MQT---SFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKF-SEVVGAIK 49 M S I + A QR+ +N++N+++ G + + F E+ A Sbjct: 3 MDNLSASLAIAGSGLSAQSQRIRVATENLANSESTGKTPGALPYTRKILSFDQELDAATG 62 Query: 50 NDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98 ++ A Y + + + + + L + Sbjct: 63 AELVIIGDVDADRSPYRIENIPGHPAADAQGNVKLPNVNVLVELADIRE 111 Score = 36.0 bits (81), Expect = 4.1, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 22/54 (40%), Gaps = 6/54 (11%) Query: 176 GISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 NIP P D +G ++ N N + E+ + T+ + + +I + Sbjct: 78 YRIENIPGHPAADA------QGNVKLPNVNVLVELADIREGTRSYEANLQVIKQ 125 >gi|193064539|ref|ZP_03045619.1| flagellar hook-associated protein FlgK [Escherichia coli E22] gi|194428412|ref|ZP_03060952.1| flagellar hook-associated protein FlgK [Escherichia coli B171] gi|260843322|ref|YP_003221100.1| flagellar hook-filament junction protein FlgK [Escherichia coli O103:H2 str. 12009] gi|192927791|gb|EDV82405.1| flagellar hook-associated protein FlgK [Escherichia coli E22] gi|194413464|gb|EDX29746.1| flagellar hook-associated protein FlgK [Escherichia coli B171] gi|257758469|dbj|BAI29966.1| flagellar hook-filament junction protein FlgK [Escherichia coli O103:H2 str. 12009] Length = 547 Score = 41.0 bits (94), Expect = 0.14, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|323171070|gb|EFZ56719.1| flagellar hook-associated protein FlgK [Escherichia coli LT-68] Length = 458 Score = 41.0 bits (94), Expect = 0.14, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 23/78 (29%), Gaps = 2/78 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M NIG + + L+ A N +N T G+ + S + GA + + V Sbjct: 1 MD-MINIGYSGASTAQVELNVTAQNTANAMTTGYTRQVAEISTI-GASGGSPNSAGNGVQ 58 Query: 61 SGKEYLSKEVGSFISTGT 78 Sbjct: 59 VDSIRRVSNQYQVNQVWY 76 >gi|309701354|emb|CBJ00655.1| flagellar hook-associated protein 1 [Escherichia coli ETEC H10407] Length = 547 Score = 41.0 bits (94), Expect = 0.14, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|229132556|ref|ZP_04261405.1| Flagellar basal-body rod protein [Bacillus cereus BDRD-ST196] gi|228650902|gb|EEL06888.1| Flagellar basal-body rod protein [Bacillus cereus BDRD-ST196] Length = 161 Score = 41.0 bits (94), Expect = 0.14, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 20/34 (58%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV 45 L + +TV+ N++N +T G++ V F+E + Sbjct: 38 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQM 71 >gi|42527853|ref|NP_972951.1| flagellar hook-associated protein FlgK [Treponema denticola ATCC 35405] gi|41818681|gb|AAS12870.1| flagellar hook-associated protein FlgK [Treponema denticola ATCC 35405] Length = 623 Score = 41.0 bits (94), Expect = 0.14, Method: Composition-based stats. Identities = 6/41 (14%), Positives = 14/41 (34%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E+ +I +N+ + + + I + Sbjct: 582 SGVNIDEELSDIIKFQHGYNASARFVSVINEMIDTVINRMG 622 Score = 36.0 bits (81), Expect = 4.8, Method: Composition-based stats. Identities = 10/50 (20%), Positives = 19/50 (38%), Gaps = 3/50 (6%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVK---FSEVVGAIKNDIDQKIS 57 + A +Q + T N+SN+ T G+ +V F + + Sbjct: 13 SLFAHQQSIQTAGHNISNSSTKGYTRQRVNLEAFEPIYRPDLTRAETPGQ 62 >gi|26247222|ref|NP_753262.1| flagellar hook-associated protein FlgK [Escherichia coli CFT073] gi|227886560|ref|ZP_04004365.1| flagellar hook-associated protein FlgK [Escherichia coli 83972] gi|300974386|ref|ZP_07172598.1| flagellar hook-associated protein FlgK [Escherichia coli MS 45-1] gi|26107623|gb|AAN79822.1|AE016759_96 Flagellar hook-associated protein 1 [Escherichia coli CFT073] gi|227836764|gb|EEJ47230.1| flagellar hook-associated protein FlgK [Escherichia coli 83972] gi|300410629|gb|EFJ94167.1| flagellar hook-associated protein FlgK [Escherichia coli MS 45-1] gi|307553084|gb|ADN45859.1| flagellar hook-associated protein FlgK [Escherichia coli ABU 83972] gi|315291060|gb|EFU50423.1| flagellar hook-associated protein FlgK [Escherichia coli MS 153-1] Length = 547 Score = 41.0 bits (94), Expect = 0.14, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|194438121|ref|ZP_03070214.1| flagellar hook-associated protein FlgK [Escherichia coli 101-1] gi|253773894|ref|YP_003036725.1| flagellar hook-associated protein FlgK [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254161188|ref|YP_003044296.1| flagellar hook-associated protein FlgK [Escherichia coli B str. REL606] gi|300928366|ref|ZP_07143900.1| flagellar hook-associated protein FlgK [Escherichia coli MS 187-1] gi|194423057|gb|EDX39051.1| flagellar hook-associated protein FlgK [Escherichia coli 101-1] gi|242376886|emb|CAQ31603.1| flagellar biosynthesis, hook-filament junction protein 1, subunit of Flagellum [Escherichia coli BL21(DE3)] gi|253324938|gb|ACT29540.1| flagellar hook-associated protein FlgK [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253973089|gb|ACT38760.1| flagellar hook-associated protein K [Escherichia coli B str. REL606] gi|253977303|gb|ACT42973.1| flagellar hook-associated protein K [Escherichia coli BL21(DE3)] gi|300463624|gb|EFK27117.1| flagellar hook-associated protein FlgK [Escherichia coli MS 187-1] gi|323962681|gb|EGB58259.1| flagellar hook protein FlgK [Escherichia coli H489] gi|323973329|gb|EGB68518.1| flagellar hook protein FlgK [Escherichia coli TA007] gi|332342628|gb|AEE55962.1| flagellar hook-associated protein FlgK [Escherichia coli UMNK88] Length = 547 Score = 41.0 bits (94), Expect = 0.14, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|258625283|ref|ZP_05720191.1| flagellar hook-associated protein 1 [Vibrio mimicus VM603] gi|258582456|gb|EEW07297.1| flagellar hook-associated protein 1 [Vibrio mimicus VM603] Length = 624 Score = 41.0 bits (94), Expect = 0.14, Method: Composition-based stats. Identities = 13/84 (15%), Positives = 28/84 (33%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 N+G + L +++L+T N+SN +T G+ V + + Sbjct: 6 LNVGTQSVLTAQRQLNTTGHNISNVNTEGYSRQSVIQGTNMPRQYGGETYGMGVHVENVR 65 Query: 65 YLSKEVGSFISTGTELDFALEGDA 88 + D++ + D Sbjct: 66 RSWDQFAVKELNIASTDYSFKRDT 89 Score = 37.2 bits (84), Expect = 2.3, Method: Composition-based stats. Identities = 6/37 (16%), Positives = 14/37 (37%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N E M+ Q + + + +I + + + Sbjct: 585 SGVNLDEEAANMMKFQQAYMASSRIIQASNDTFNTIL 621 >gi|120613056|ref|YP_972734.1| flagellar basal-body rod protein FlgB [Acidovorax citrulli AAC00-1] gi|120591520|gb|ABM34960.1| flagellar basal-body rod protein FlgB [Acidovorax citrulli AAC00-1] Length = 147 Score = 41.0 bits (94), Expect = 0.14, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 18/43 (41%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 A + +R +A N++N DT G+ F++ + Sbjct: 14 NALMLRAERQRAIASNIANADTPGYVARDFNFADALRDATGQG 56 >gi|258621055|ref|ZP_05716089.1| flagellar hook-associated protein 1 [Vibrio mimicus VM573] gi|262166276|ref|ZP_06034013.1| flagellar hook-associated protein FlgK [Vibrio mimicus VM223] gi|262170831|ref|ZP_06038509.1| flagellar hook-associated protein FlgK [Vibrio mimicus MB-451] gi|258586443|gb|EEW11158.1| flagellar hook-associated protein 1 [Vibrio mimicus VM573] gi|261891907|gb|EEY37893.1| flagellar hook-associated protein FlgK [Vibrio mimicus MB-451] gi|262025992|gb|EEY44660.1| flagellar hook-associated protein FlgK [Vibrio mimicus VM223] Length = 624 Score = 41.0 bits (94), Expect = 0.14, Method: Composition-based stats. Identities = 13/84 (15%), Positives = 28/84 (33%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 N+G + L +++L+T N+SN +T G+ V + + Sbjct: 6 LNVGTQSVLTAQRQLNTTGHNISNVNTEGYSRQSVIQGTNMPRQYGGETYGMGVHVENVR 65 Query: 65 YLSKEVGSFISTGTELDFALEGDA 88 + D++ + D Sbjct: 66 RSWDQFAVKELNIASTDYSFKRDT 89 Score = 37.2 bits (84), Expect = 2.2, Method: Composition-based stats. Identities = 6/37 (16%), Positives = 14/37 (37%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N E M+ Q + + + +I + + + Sbjct: 585 SGVNLDEEAANMMKFQQAYMASSRIIQASNDTFNTIL 621 >gi|145298497|ref|YP_001141338.1| flagellar hook-associated protein FlgK [Aeromonas salmonicida subsp. salmonicida A449] gi|142851269|gb|ABO89590.1| flagellar hook-associated protein FlgK [Aeromonas salmonicida subsp. salmonicida A449] Length = 666 Score = 41.0 bits (94), Expect = 0.14, Method: Composition-based stats. Identities = 9/35 (25%), Positives = 19/35 (54%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39 IG + LA ++ L T ++N+ N ++ G+ + Sbjct: 6 LGIGTSGVLAQQRLLQTTSNNIVNVNSQGYVRERT 40 >gi|300938647|ref|ZP_07153376.1| flagellar hook-associated protein FlgK [Escherichia coli MS 21-1] gi|300456432|gb|EFK19925.1| flagellar hook-associated protein FlgK [Escherichia coli MS 21-1] Length = 547 Score = 41.0 bits (94), Expect = 0.14, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|300902473|ref|ZP_07120455.1| flagellar hook-associated protein FlgK [Escherichia coli MS 84-1] gi|301304979|ref|ZP_07211081.1| flagellar hook-associated protein FlgK [Escherichia coli MS 124-1] gi|300405505|gb|EFJ89043.1| flagellar hook-associated protein FlgK [Escherichia coli MS 84-1] gi|300839697|gb|EFK67457.1| flagellar hook-associated protein FlgK [Escherichia coli MS 124-1] gi|315253883|gb|EFU33851.1| flagellar hook-associated protein FlgK [Escherichia coli MS 85-1] Length = 547 Score = 41.0 bits (94), Expect = 0.14, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|254464939|ref|ZP_05078350.1| flagellar hook-associated protein FlgK [Rhodobacterales bacterium Y4I] gi|206685847|gb|EDZ46329.1| flagellar hook-associated protein FlgK [Rhodobacterales bacterium Y4I] Length = 482 Score = 41.0 bits (94), Expect = 0.14, Method: Composition-based stats. Identities = 8/32 (25%), Positives = 16/32 (50%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGF 34 ++ N + A + VA+N++N T G+ Sbjct: 5 SALNSAMTGLSAAGRSSQVVAENLANALTPGY 36 Score = 35.2 bits (79), Expect = 8.4, Method: Composition-based stats. Identities = 24/201 (11%), Positives = 61/201 (30%), Gaps = 11/201 (5%) Query: 39 VKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98 V+ E + A+ D+ ++ + + G F G+ D A +E + Sbjct: 292 VEAQEDLDAMAADLIERFQDPSLDATIGVTDAGIFTDDGSFYDPANIVGLSNRIELNDLL 351 Query: 99 ILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATM 158 L R G DG +A G + + G + ++ Sbjct: 352 ALDRAGETWRFRDGLYAAAPGDPGDSSLLQAYSDALNTTRTVSSVGLGTANMTAATLSAN 411 Query: 159 GLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQ 218 L R ++ + + +L+ ++ E+ ++ + + Sbjct: 412 LLSRFAQDNETAARASTFAATSFNELSQAELALG-----------VDTDAELQNLMLVEK 460 Query: 219 KFNSITTLIDENEKSMLEAIR 239 + + ++ ++ M +R Sbjct: 461 YYAANARMLSVVDELMETLLR 481 >gi|194365683|ref|YP_002028293.1| flagellar basal body rod protein FlgB [Stenotrophomonas maltophilia R551-3] gi|194348487|gb|ACF51610.1| flagellar basal-body rod protein FlgB [Stenotrophomonas maltophilia R551-3] Length = 131 Score = 41.0 bits (94), Expect = 0.14, Method: Composition-based stats. Identities = 12/55 (21%), Positives = 23/55 (41%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65 A EQR+ +A N+ N DT G++ + F + + + + + Y Sbjct: 15 AMPLREQRMKLIASNLGNADTPGYKAQDLDFDAALRHAQGQDANGLMTTTNEQHY 69 >gi|85706143|ref|ZP_01037238.1| flagellar hook-associated protein [Roseovarius sp. 217] gi|85669307|gb|EAQ24173.1| flagellar hook-associated protein [Roseovarius sp. 217] Length = 459 Score = 41.0 bits (94), Expect = 0.14, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 21/42 (50%), Gaps = 1/42 (2%) Query: 199 LEDSN-ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 LE +N +S E+ +++ + Q F + +I + + +R Sbjct: 417 LELANGVDSDAELQRLLLVEQAFGANARMIQTIDDMLDTLLR 458 >gi|323163692|gb|EFZ49513.1| flagellar hook-associated protein FlgK [Escherichia coli E128010] Length = 547 Score = 41.0 bits (94), Expect = 0.14, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|209773324|gb|ACI84974.1| flagellar hook-filament junction protein 1 FlgK [Escherichia coli] gi|320659346|gb|EFX26915.1| flagellar hook-associated protein FlgK [Escherichia coli O55:H7 str. USDA 5905] Length = 547 Score = 41.0 bits (94), Expect = 0.14, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|325497610|gb|EGC95469.1| flagellar hook-associated protein FlgK [Escherichia fergusonii ECD227] Length = 548 Score = 41.0 bits (94), Expect = 0.14, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLSAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|320186970|gb|EFW61683.1| Flagellar hook-associated protein FlgK [Shigella flexneri CDC 796-83] Length = 547 Score = 41.0 bits (94), Expect = 0.14, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|293409448|ref|ZP_06653024.1| flagellar hook-associated protein FlgK [Escherichia coli B354] gi|331662488|ref|ZP_08363411.1| flagellar hook-associated protein FlgK [Escherichia coli TA143] gi|331672601|ref|ZP_08373390.1| flagellar hook-associated protein FlgK [Escherichia coli TA280] gi|291469916|gb|EFF12400.1| flagellar hook-associated protein FlgK [Escherichia coli B354] gi|331060910|gb|EGI32874.1| flagellar hook-associated protein FlgK [Escherichia coli TA143] gi|331070244|gb|EGI41610.1| flagellar hook-associated protein FlgK [Escherichia coli TA280] Length = 547 Score = 41.0 bits (94), Expect = 0.14, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|260574381|ref|ZP_05842385.1| flagellar hook-associated protein FlgK [Rhodobacter sp. SW2] gi|259023277|gb|EEW26569.1| flagellar hook-associated protein FlgK [Rhodobacter sp. SW2] Length = 485 Score = 41.0 bits (94), Expect = 0.14, Method: Composition-based stats. Identities = 7/41 (17%), Positives = 19/41 (46%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV 44 S + ++ A + V+ N++N T G+ ++ + + Sbjct: 6 SLSNAMSGLTASSRAAEVVSSNVANAMTEGYARREINLAAL 46 Score = 38.7 bits (88), Expect = 0.78, Method: Composition-based stats. Identities = 6/44 (13%), Positives = 21/44 (47%), Gaps = 1/44 (2%) Query: 192 VTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 +++ LE+ ++ EM +++ + Q +++ +I + Sbjct: 438 TALQQQELENG-VDTDQEMQKLLLIEQAYSANARVIQTAGDMID 480 >gi|218700416|ref|YP_002408045.1| flagellar hook-associated protein FlgK [Escherichia coli IAI39] gi|218370402|emb|CAR18207.1| flagellar hook-filament junction protein 1 [Escherichia coli IAI39] Length = 547 Score = 41.0 bits (94), Expect = 0.14, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|4433373|dbj|BAA21014.1| FlgB protein [Salmonella enterica subsp. enterica serovar Typhimurium] Length = 66 Score = 41.0 bits (94), Expect = 0.14, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 23/50 (46%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 A QR +A N++N DT G++ + F+ + + ++ VA Sbjct: 15 ALNLRAQRQEILAANIANADTPGYQARDIDFASELKKVMVRGREETGGVA 64 >gi|229102342|ref|ZP_04233050.1| Flagellar basal-body rod protein [Bacillus cereus Rock3-28] gi|229115184|ref|ZP_04244594.1| Flagellar basal-body rod protein [Bacillus cereus Rock1-3] gi|228668324|gb|EEL23756.1| Flagellar basal-body rod protein [Bacillus cereus Rock1-3] gi|228680989|gb|EEL35158.1| Flagellar basal-body rod protein [Bacillus cereus Rock3-28] Length = 135 Score = 41.0 bits (94), Expect = 0.14, Method: Composition-based stats. Identities = 12/72 (16%), Positives = 28/72 (38%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 L + +TV+ N++N +T G++ V F+E + + + S + Sbjct: 12 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMSKSSALYKNNAADLKSNPDLYQTNEM 71 Query: 72 SFISTGTELDFA 83 + + +A Sbjct: 72 HLPTVNMKNTYA 83 >gi|220913734|ref|YP_002489043.1| flagellar basal-body rod protein FlgC [Arthrobacter chlorophenolicus A6] gi|219860612|gb|ACL40954.1| flagellar basal-body rod protein FlgC [Arthrobacter chlorophenolicus A6] Length = 130 Score = 41.0 bits (94), Expect = 0.14, Method: Composition-based stats. Identities = 8/46 (17%), Positives = 22/46 (47%), Gaps = 1/46 (2%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G++ + + +MG +I + + + ++D ++ L A+ I Sbjct: 84 GYVRYPDIDLAEQMGALIVAQRGYQANAQVVDRARETYLAAL-EIG 128 Score = 39.5 bits (90), Expect = 0.44, Method: Composition-based stats. Identities = 15/109 (13%), Positives = 32/109 (29%), Gaps = 6/109 (5%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTD----TVG--FRTIKVKFSEVVGAIKNDIDQKIS 57 + I A + L V+DN++N + T G FR ++ +E + Sbjct: 5 AIGIAGTALTVHRKWLDAVSDNLANMNNAARTDGEAFRARYIEAAEGTDGTGVYVRSTPE 64 Query: 58 FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106 A G+ + + G ++ + + Sbjct: 65 GDAEGRMVYQPDHPLADAEGYVRYPDIDLAEQMGALIVAQRGYQANAQV 113 >gi|300936133|ref|ZP_07151072.1| flagellar hook-associated protein FlgK [Escherichia coli MS 21-1] gi|300458711|gb|EFK22204.1| flagellar hook-associated protein FlgK [Escherichia coli MS 21-1] Length = 458 Score = 41.0 bits (94), Expect = 0.14, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 23/78 (29%), Gaps = 2/78 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M NIG + + L+ A N +N T G+ + S + GA + + V Sbjct: 1 MD-MINIGYSGASTAQVELNVTAQNTANAMTTGYTRQVAEISTI-GASGGSPNSAGNGVQ 58 Query: 61 SGKEYLSKEVGSFISTGT 78 Sbjct: 59 VDSIRRVSNQYQVNQVWY 76 >gi|331646340|ref|ZP_08347443.1| flagellar hook-associated protein FlgK [Escherichia coli M605] gi|281178191|dbj|BAI54521.1| flagellar hook-filament junction protein 1 FlgK [Escherichia coli SE15] gi|330910896|gb|EGH39406.1| flagellar hook-associated protein FlgK [Escherichia coli AA86] gi|331045092|gb|EGI17219.1| flagellar hook-associated protein FlgK [Escherichia coli M605] Length = 547 Score = 41.0 bits (94), Expect = 0.14, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|215486291|ref|YP_002328722.1| flagellar hook-associated protein FlgK [Escherichia coli O127:H6 str. E2348/69] gi|312968844|ref|ZP_07783051.1| flagellar hook-associated protein FlgK [Escherichia coli 2362-75] gi|215264363|emb|CAS08720.1| flagellar hook-filament junction protein 1 [Escherichia coli O127:H6 str. E2348/69] gi|312286246|gb|EFR14159.1| flagellar hook-associated protein FlgK [Escherichia coli 2362-75] Length = 547 Score = 41.0 bits (94), Expect = 0.14, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|187732740|ref|YP_001880749.1| flagellar hook-associated protein FlgK [Shigella boydii CDC 3083-94] gi|187429732|gb|ACD09006.1| flagellar hook-associated protein FlgK [Shigella boydii CDC 3083-94] Length = 547 Score = 41.0 bits (94), Expect = 0.14, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|300816784|ref|ZP_07097004.1| flagellar hook-associated protein FlgK [Escherichia coli MS 107-1] gi|309798076|ref|ZP_07692451.1| flagellar hook-associated protein FlgK [Escherichia coli MS 145-7] gi|300530558|gb|EFK51620.1| flagellar hook-associated protein FlgK [Escherichia coli MS 107-1] gi|308118359|gb|EFO55621.1| flagellar hook-associated protein FlgK [Escherichia coli MS 145-7] Length = 547 Score = 41.0 bits (94), Expect = 0.15, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|261211316|ref|ZP_05925604.1| flagellar hook-associated protein FlgK [Vibrio sp. RC341] gi|260839271|gb|EEX65897.1| flagellar hook-associated protein FlgK [Vibrio sp. RC341] Length = 624 Score = 41.0 bits (94), Expect = 0.15, Method: Composition-based stats. Identities = 13/84 (15%), Positives = 28/84 (33%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 N+G + L +++L+T N+SN +T G+ V + + Sbjct: 6 LNVGTQSVLTAQRQLNTTGHNISNVNTEGYSRQSVIQGTNMPRQYGGETYGMGVHVENVR 65 Query: 65 YLSKEVGSFISTGTELDFALEGDA 88 + D++ + D Sbjct: 66 RSWDQFAVKELNIASTDYSFKRDT 89 Score = 37.2 bits (84), Expect = 2.4, Method: Composition-based stats. Identities = 6/37 (16%), Positives = 14/37 (37%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N E M+ Q + + + +I + + + Sbjct: 585 SGVNLDEEAANMMKFQQAYMASSRIIQASNDTFNTIL 621 >gi|260867445|ref|YP_003233847.1| flagellar hook-filament junction protein FlgK [Escherichia coli O111:H- str. 11128] gi|257763801|dbj|BAI35296.1| flagellar hook-filament junction protein FlgK [Escherichia coli O111:H- str. 11128] Length = 547 Score = 41.0 bits (94), Expect = 0.15, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|260854565|ref|YP_003228456.1| flagellar hook-filament junction protein FlgK [Escherichia coli O26:H11 str. 11368] gi|257753214|dbj|BAI24716.1| flagellar hook-filament junction protein FlgK [Escherichia coli O26:H11 str. 11368] gi|323156889|gb|EFZ43023.1| flagellar hook-associated protein FlgK [Escherichia coli EPECa14] Length = 547 Score = 41.0 bits (94), Expect = 0.15, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|295678061|ref|YP_003606585.1| flagellar basal-body rod protein FlgB [Burkholderia sp. CCGE1002] gi|295437904|gb|ADG17074.1| flagellar basal-body rod protein FlgB [Burkholderia sp. CCGE1002] Length = 166 Score = 41.0 bits (94), Expect = 0.15, Method: Composition-based stats. Identities = 8/54 (14%), Positives = 19/54 (35%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 A R ++ N++N DT G++ + F+ + + + Sbjct: 15 AMDVRAYRQELLSSNIANADTPGYKARDIDFASSLAGALKKTGGSTAGQGASNN 68 >gi|271500063|ref|YP_003333088.1| flagellar basal-body rod protein FlgB [Dickeya dadantii Ech586] gi|270343618|gb|ACZ76383.1| flagellar basal-body rod protein FlgB [Dickeya dadantii Ech586] Length = 139 Score = 41.0 bits (94), Expect = 0.15, Method: Composition-based stats. Identities = 11/62 (17%), Positives = 21/62 (33%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR +A N++N DT G++ + F+ + + V+ Sbjct: 15 ALNLRAQRQEILAANIANADTPGYQARDIDFASELNKVMEQGRTSNQSVSLNLTSTRHIP 74 Query: 71 GS 72 Sbjct: 75 AQ 76 >gi|260853472|ref|YP_003227363.1| putative lateral flagellar hook-filament junction protein [Escherichia coli O26:H11 str. 11368] gi|257752121|dbj|BAI23623.1| predicted lateral flagellar hook-filament junction protein [Escherichia coli O26:H11 str. 11368] gi|323158097|gb|EFZ44196.1| flagellar hook-associated protein FlgK [Escherichia coli EPECa14] Length = 458 Score = 41.0 bits (94), Expect = 0.15, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 23/78 (29%), Gaps = 2/78 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M NIG + + L+ A N +N T G+ + S + GA + + V Sbjct: 1 MD-MINIGYSGASTAQVELNVTAQNTANAMTTGYTRQVAEISTI-GASGGSPNSAGNGVQ 58 Query: 61 SGKEYLSKEVGSFISTGT 78 Sbjct: 59 VDSIRRVSNQYQVNQVWY 76 >gi|152997576|ref|YP_001342411.1| flagellar hook-associated protein FlgK [Marinomonas sp. MWYL1] gi|150838500|gb|ABR72476.1| flagellar hook-associated protein FlgK [Marinomonas sp. MWYL1] Length = 658 Score = 41.0 bits (94), Expect = 0.15, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 1/41 (2%) Query: 1 MQTSFN-IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 M ++ IGL+ L+ R++T N +N DT G+ + Sbjct: 1 MGSNLYSIGLSGLLSSNARINTTGQNTANVDTEGYSRQRTD 41 >gi|320196436|gb|EFW71059.1| Flagellar hook-associated protein FlgK [Escherichia coli WV_060327] Length = 547 Score = 41.0 bits (94), Expect = 0.15, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|331666552|ref|ZP_08367426.1| flagellar hook-associated protein FlgK [Escherichia coli TA271] gi|331065776|gb|EGI37660.1| flagellar hook-associated protein FlgK [Escherichia coli TA271] Length = 458 Score = 41.0 bits (94), Expect = 0.15, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 23/78 (29%), Gaps = 2/78 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M NIG + + L+ A N +N T G+ + S + GA + + V Sbjct: 1 MD-MINIGYSGASTAQVELNVTAQNTANAMTTGYTRQVAEISTI-GASGGSPNSAGNGVQ 58 Query: 61 SGKEYLSKEVGSFISTGT 78 Sbjct: 59 VDSIRRVSNQYQVNQVWY 76 >gi|307313513|ref|ZP_07593134.1| flagellar hook-associated protein FlgK [Escherichia coli W] gi|306906681|gb|EFN37192.1| flagellar hook-associated protein FlgK [Escherichia coli W] gi|315059548|gb|ADT73875.1| flagellar hook-filament junction protein 1 [Escherichia coli W] gi|323181553|gb|EFZ66973.1| flagellar hook-associated protein FlgK [Escherichia coli 1357] gi|323379893|gb|ADX52161.1| flagellar hook-associated protein FlgK [Escherichia coli KO11] Length = 458 Score = 41.0 bits (94), Expect = 0.15, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 23/78 (29%), Gaps = 2/78 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M NIG + + L+ A N +N T G+ + S + GA + + V Sbjct: 1 MD-MINIGYSGASTAQVELNVTAQNTANAMTTGYTRQVAEISTI-GASGGSPNSAGNGVQ 58 Query: 61 SGKEYLSKEVGSFISTGT 78 Sbjct: 59 VDSIRRVSNQYQVNQVWY 76 >gi|300922608|ref|ZP_07138708.1| flagellar hook-associated protein FlgK [Escherichia coli MS 182-1] gi|301328548|ref|ZP_07221609.1| flagellar hook-associated protein FlgK [Escherichia coli MS 78-1] gi|300421085|gb|EFK04396.1| flagellar hook-associated protein FlgK [Escherichia coli MS 182-1] gi|300844940|gb|EFK72700.1| flagellar hook-associated protein FlgK [Escherichia coli MS 78-1] Length = 547 Score = 41.0 bits (94), Expect = 0.15, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|222032835|emb|CAP75574.1| flagellar hook-associated protein 1 [Escherichia coli LF82] gi|312945644|gb|ADR26471.1| flagellar hook-associated protein FlgK [Escherichia coli O83:H1 str. NRG 857C] Length = 547 Score = 41.0 bits (94), Expect = 0.15, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|94495413|ref|ZP_01301993.1| flagellar cell-proximal portion protein [Sphingomonas sp. SKA58] gi|94424801|gb|EAT09822.1| flagellar cell-proximal portion protein [Sphingomonas sp. SKA58] Length = 138 Score = 41.0 bits (94), Expect = 0.15, Method: Composition-based stats. Identities = 9/36 (25%), Positives = 18/36 (50%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +S E+ MI + + + +++ + MLE IR Sbjct: 100 VDSNAELVDMIETARMYQNNVQVLNTAKSLMLETIR 135 Score = 36.8 bits (83), Expect = 2.6, Method: Composition-based stats. Identities = 22/123 (17%), Positives = 43/123 (34%), Gaps = 9/123 (7%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKF---SEVVGAIKNDI 52 F+I A A RL+T A NM+N + G +R IK F ++ G + Sbjct: 9 MNIFDIAGRAMSAQLVRLNTTASNMANAGNVTGSAQDAYRAIKPVFTSVTDSPGVSTVKV 68 Query: 53 DQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDG 112 ++ A + + G + A++ +A + + + T Sbjct: 69 SDVVTTKAEPTKRHDPNHPLADANGDVWEAAVDSNAELVDMIETARMYQNNVQVLNTAKS 128 Query: 113 SLV 115 ++ Sbjct: 129 LML 131 >gi|163939549|ref|YP_001644433.1| flagellar basal body rod protein FlgB [Bacillus weihenstephanensis KBAB4] gi|163861746|gb|ABY42805.1| flagellar basal-body rod protein [Bacillus weihenstephanensis KBAB4] Length = 135 Score = 41.0 bits (94), Expect = 0.15, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 31/72 (43%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 L + +TV+ N++N +T G++ V F+E + + + + S + V Sbjct: 12 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEKMNMSSGLYKKNAADLKSNPDLYQTNVM 71 Query: 72 SFISTGTELDFA 83 + T+ +A Sbjct: 72 HLPTANTKNTYA 83 >gi|327254560|gb|EGE66176.1| flagellar hook-associated protein FlgK [Escherichia coli STEC_7v] Length = 458 Score = 41.0 bits (94), Expect = 0.15, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 23/78 (29%), Gaps = 2/78 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M NIG + + L+ A N +N T G+ + S + GA + + V Sbjct: 1 MD-MINIGYSGASTAQVELNVTAQNTANAMTTGYTRQVAEISTI-GASGGSPNSAGNGVQ 58 Query: 61 SGKEYLSKEVGSFISTGT 78 Sbjct: 59 VDSIRRVSNQYQVNQVWY 76 >gi|323967023|gb|EGB62449.1| flagellar hook protein FlgK [Escherichia coli M863] gi|327253481|gb|EGE65119.1| flagellar hook-associated protein FlgK [Escherichia coli STEC_7v] Length = 547 Score = 41.0 bits (94), Expect = 0.15, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|323190594|gb|EFZ75866.1| flagellar hook-associated protein FlgK [Escherichia coli RN587/1] Length = 547 Score = 41.0 bits (94), Expect = 0.15, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|322382414|ref|ZP_08056317.1| FlgK-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153631|gb|EFX46010.1| FlgK-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 472 Score = 41.0 bits (94), Expect = 0.15, Method: Composition-based stats. Identities = 14/124 (11%), Positives = 37/124 (29%), Gaps = 6/124 (4%) Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 ++ + ++ + + G S+ G +E + Sbjct: 352 DEKLISGNNTLAKLMAQLKDTKFTFSGAGRGITNSTINDFYGSLVGQLGVQSKEATRQYE 411 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 N ++ + T G +E EM +M+ FN+ + ++ + + I Sbjct: 412 NEGKLVVQADTRRTSVSGVVEL------EEMMEMVKYNHSFNAAARFMTTYDEILNKLIN 465 Query: 240 NIAS 243 + Sbjct: 466 GTGT 469 >gi|320664481|gb|EFX31632.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7 str. LSU-61] Length = 547 Score = 41.0 bits (94), Expect = 0.15, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|331657144|ref|ZP_08358106.1| flagellar hook-associated protein FlgK [Escherichia coli TA206] gi|324007922|gb|EGB77141.1| flagellar hook-associated protein FlgK [Escherichia coli MS 57-2] gi|331055392|gb|EGI27401.1| flagellar hook-associated protein FlgK [Escherichia coli TA206] Length = 547 Score = 41.0 bits (94), Expect = 0.15, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|167568104|ref|ZP_02361020.1| flagellar basal body rod protein FlgB [Burkholderia oklahomensis EO147] gi|167574222|ref|ZP_02367096.1| flagellar basal body rod protein FlgB [Burkholderia oklahomensis C6786] Length = 163 Score = 41.0 bits (94), Expect = 0.15, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 21/52 (40%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 A R ++ N++N DT G+R V FS + + + A+ Sbjct: 15 ALDVRTYRQELLSSNIANADTPGYRARDVDFSSTLARALKQDGARSAGNAAQ 66 >gi|146294544|ref|YP_001184968.1| flagellar hook-associated protein FlgK [Shewanella putrefaciens CN-32] gi|145566234|gb|ABP77169.1| flagellar hook-associated protein FlgK [Shewanella putrefaciens CN-32] Length = 457 Score = 41.0 bits (94), Expect = 0.15, Method: Composition-based stats. Identities = 10/39 (25%), Positives = 19/39 (48%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 + NIG + LA L+ ++N++N G+ +V Sbjct: 1 MSMLNIGKSGLLASMAALNATSNNVANAMVAGYSRQQVM 39 Score = 40.2 bits (92), Expect = 0.27, Method: Composition-based stats. Identities = 6/39 (15%), Positives = 13/39 (33%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S N E +I Q + + +I ++ + Sbjct: 417 TSGVNPDEEGINLIIYQQSYMANAKVISTADQLFQTMLS 455 >gi|224370754|ref|YP_002604918.1| putative flagellar hook-associated protein [Desulfobacterium autotrophicum HRM2] gi|223693471|gb|ACN16754.1| putative flagellar hook-associated protein [Desulfobacterium autotrophicum HRM2] Length = 1268 Score = 41.0 bits (94), Expect = 0.15, Method: Composition-based stats. Identities = 6/37 (16%), Positives = 16/37 (43%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S + EM +I F + + L+ +++ + + Sbjct: 1229 SAVSLDEEMINLIKYQHAFGAASKLVTVSDEMLNTLL 1265 Score = 38.3 bits (87), Expect = 0.92, Method: Composition-based stats. Identities = 7/32 (21%), Positives = 16/32 (50%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGF 34 ++ NI A A + L+ +N++N + + Sbjct: 6 STLNIAQGAIAAQQYGLNVTGNNIANVNNPDY 37 >gi|157160609|ref|YP_001457927.1| flagellar hook-associated protein FlgK [Escherichia coli HS] gi|170020522|ref|YP_001725476.1| flagellar hook-associated protein FlgK [Escherichia coli ATCC 8739] gi|312971219|ref|ZP_07785397.1| flagellar hook-associated protein FlgK [Escherichia coli 1827-70] gi|157066289|gb|ABV05544.1| flagellar hook-associated protein FlgK [Escherichia coli HS] gi|169755450|gb|ACA78149.1| flagellar hook-associated protein FlgK [Escherichia coli ATCC 8739] gi|310336421|gb|EFQ01607.1| flagellar hook-associated protein FlgK [Escherichia coli 1827-70] Length = 547 Score = 41.0 bits (94), Expect = 0.15, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|332669188|ref|YP_004452196.1| flagellar basal-body rod protein FlgC [Cellulomonas fimi ATCC 484] gi|332338226|gb|AEE44809.1| flagellar basal-body rod protein FlgC [Cellulomonas fimi ATCC 484] Length = 132 Score = 41.0 bits (94), Expect = 0.15, Method: Composition-based stats. Identities = 5/43 (11%), Positives = 21/43 (48%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ + + +M Q++ + + + ++D ++ A++ Sbjct: 86 GYVRYPDIDMSSQMTQLMMAQRGYQANAAVVDRARETYNAALQ 128 Score = 37.5 bits (85), Expect = 1.7, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 30/110 (27%), Gaps = 7/110 (6%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKN-DIDQKI 56 + I + L V+DN+SN TV FR V +E G + + + Sbjct: 6 AIGIASTGLTVHRKWLDAVSDNLSNLSTVRPTSEEAFRAKYVVAAESAGENQGVQVAGIV 65 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106 A G+ G ++ + + Sbjct: 66 EGSAEGRLVYEPGHPLADEDGYVRYPDIDMSSQMTQLMMAQRGYQANAAV 115 >gi|292489136|ref|YP_003532023.1| flagellar basal-body rod protein FlgB [Erwinia amylovora CFBP1430] gi|291554570|emb|CBA22186.1| Flagellar basal-body rod protein flgB [Erwinia amylovora CFBP1430] gi|312173294|emb|CBX81549.1| Flagellar basal-body rod protein flgB [Erwinia amylovora ATCC BAA-2158] Length = 147 Score = 41.0 bits (94), Expect = 0.15, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 24/68 (35%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A L +R +A N++N DT G+ + FS+ + + S V+ Sbjct: 27 ALSLLSRRQEVLASNIANADTPGYLARDIDFSQQLKNTLANQSMAKSPVSLSLTAEKHIE 86 Query: 71 GSFISTGT 78 G Sbjct: 87 GKGRPFDD 94 >gi|229172390|ref|ZP_04299949.1| Flagellar basal-body rod protein [Bacillus cereus MM3] gi|228610861|gb|EEK68124.1| Flagellar basal-body rod protein [Bacillus cereus MM3] Length = 135 Score = 41.0 bits (94), Expect = 0.15, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 30/72 (41%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 L + +TV+ N++N +T G++ V F+E + ++ + S + Sbjct: 12 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNVADLKSNPDLYQTNEM 71 Query: 72 SFISTGTELDFA 83 + T+ +A Sbjct: 72 HLPTVNTKNTYA 83 >gi|317129212|ref|YP_004095494.1| flagellar basal-body rod protein FlgB [Bacillus cellulosilyticus DSM 2522] gi|315474160|gb|ADU30763.1| flagellar basal-body rod protein FlgB [Bacillus cellulosilyticus DSM 2522] Length = 134 Score = 41.0 bits (94), Expect = 0.15, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 22/42 (52%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51 A A R +T+A N++N DT ++ K FS + + N+ Sbjct: 14 TALSASMTRHNTIAQNIANVDTPNYKAKKAVFSHELNSAMNN 55 >gi|218689035|ref|YP_002397247.1| flagellar hook-associated protein FlgK [Escherichia coli ED1a] gi|218426599|emb|CAR07427.1| flagellar hook-filament junction protein 1 [Escherichia coli ED1a] Length = 547 Score = 41.0 bits (94), Expect = 0.15, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|15801199|ref|NP_287216.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7 EDL933] gi|15830714|ref|NP_309487.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7 str. Sakai] gi|168747142|ref|ZP_02772164.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7 str. EC4113] gi|168758625|ref|ZP_02783632.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7 str. EC4401] gi|168764494|ref|ZP_02789501.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7 str. EC4501] gi|168767741|ref|ZP_02792748.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7 str. EC4486] gi|168773927|ref|ZP_02798934.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7 str. EC4196] gi|168783612|ref|ZP_02808619.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7 str. EC4076] gi|168790017|ref|ZP_02815024.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7 str. EC869] gi|168802027|ref|ZP_02827034.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7 str. EC508] gi|195935472|ref|ZP_03080854.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7 str. EC4024] gi|208808965|ref|ZP_03251302.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7 str. EC4206] gi|208815841|ref|ZP_03257020.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7 str. EC4045] gi|208822064|ref|ZP_03262383.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7 str. EC4042] gi|209396607|ref|YP_002269928.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7 str. EC4115] gi|217328179|ref|ZP_03444261.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7 str. TW14588] gi|254792464|ref|YP_003077301.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7 str. TW14359] gi|261227013|ref|ZP_05941294.1| flagellar hook-filament junction protein 1 [Escherichia coli O157:H7 str. FRIK2000] gi|261256247|ref|ZP_05948780.1| flagellar hook-filament junction protein 1 [Escherichia coli O157:H7 str. FRIK966] gi|12514623|gb|AAG55828.1|AE005318_5 flagellar biosynthesis, hook-filament junction protein 1 [Escherichia coli O157:H7 str. EDL933] gi|13360924|dbj|BAB34883.1| flagellar hook-filament junction protein 1 FlgK [Escherichia coli O157:H7 str. Sakai] gi|187770507|gb|EDU34351.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7 str. EC4196] gi|188018095|gb|EDU56217.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7 str. EC4113] gi|188999081|gb|EDU68067.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7 str. EC4076] gi|189354572|gb|EDU72991.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7 str. EC4401] gi|189363324|gb|EDU81743.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7 str. EC4486] gi|189365527|gb|EDU83943.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7 str. EC4501] gi|189370488|gb|EDU88904.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7 str. EC869] gi|189375922|gb|EDU94338.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7 str. EC508] gi|208728766|gb|EDZ78367.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7 str. EC4206] gi|208732489|gb|EDZ81177.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7 str. EC4045] gi|208737549|gb|EDZ85232.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7 str. EC4042] gi|209158007|gb|ACI35440.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7 str. EC4115] gi|209773318|gb|ACI84971.1| flagellar hook-filament junction protein 1 FlgK [Escherichia coli] gi|209773320|gb|ACI84972.1| flagellar hook-filament junction protein 1 FlgK [Escherichia coli] gi|209773322|gb|ACI84973.1| flagellar hook-filament junction protein 1 FlgK [Escherichia coli] gi|209773326|gb|ACI84975.1| flagellar hook-filament junction protein 1 FlgK [Escherichia coli] gi|217318606|gb|EEC27032.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7 str. TW14588] gi|254591864|gb|ACT71225.1| flagellar hook-filament junction protein 1 [Escherichia coli O157:H7 str. TW14359] gi|320189765|gb|EFW64421.1| Flagellar hook-associated protein FlgK [Escherichia coli O157:H7 str. EC1212] gi|320637533|gb|EFX07333.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H7 str. G5101] gi|320643094|gb|EFX12295.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H- str. 493-89] gi|320648552|gb|EFX17207.1| flagellar hook-associated protein FlgK [Escherichia coli O157:H- str. H 2687] gi|320653866|gb|EFX21940.1| flagellar hook-associated protein FlgK [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|326339304|gb|EGD63118.1| Flagellar hook-associated protein FlgK [Escherichia coli O157:H7 str. 1125] gi|326344735|gb|EGD68483.1| Flagellar hook-associated protein FlgK [Escherichia coli O157:H7 str. 1044] Length = 547 Score = 41.0 bits (94), Expect = 0.15, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|323976263|gb|EGB71356.1| flagellar hook protein FlgK [Escherichia coli TW10509] Length = 458 Score = 41.0 bits (94), Expect = 0.16, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 23/78 (29%), Gaps = 2/78 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M NIG + + L+ A N +N T G+ + S + GA + + V Sbjct: 1 MD-MINIGYSGASTAQVELNVTAQNTANAMTTGYTRQVAEISTI-GASGGSPNSAGNGVQ 58 Query: 61 SGKEYLSKEVGSFISTGT 78 Sbjct: 59 VDSIRRVSNQYQVNQVWY 76 >gi|309788151|ref|ZP_07682757.1| flagellar hook-associated protein FlgK [Shigella dysenteriae 1617] gi|308924003|gb|EFP69504.1| flagellar hook-associated protein FlgK [Shigella dysenteriae 1617] Length = 366 Score = 41.0 bits (94), Expect = 0.16, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|293414375|ref|ZP_06657024.1| flagellar hook-associated protein FlgK [Escherichia coli B185] gi|291434433|gb|EFF07406.1| flagellar hook-associated protein FlgK [Escherichia coli B185] Length = 547 Score = 41.0 bits (94), Expect = 0.16, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|254473329|ref|ZP_05086726.1| flagellar basal-body rod protein FlgC [Pseudovibrio sp. JE062] gi|211957445|gb|EEA92648.1| flagellar basal-body rod protein FlgC [Pseudovibrio sp. JE062] Length = 139 Score = 41.0 bits (94), Expect = 0.16, Method: Composition-based stats. Identities = 15/127 (11%), Positives = 39/127 (30%) Query: 117 ASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSG 176 +S V + + G + K I + V +N G Sbjct: 12 SSSGLRVQSQRMRIVSENLANVQSTGDTPGANPYQRKTITFKSEVDRALGANLVAVKNIG 71 Query: 177 ISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + + G ++ N N++ E+ M ++ + + ++ ++ + + Sbjct: 72 SDKGDYRVEFDPSHPAADENGNVKYPNVNTLIELADMREASRSYEAGLQMMVKSREMITR 131 Query: 237 AIRNIAS 243 I + S Sbjct: 132 TIDLLRS 138 Score = 40.6 bits (93), Expect = 0.19, Method: Composition-based stats. Identities = 15/104 (14%), Positives = 35/104 (33%), Gaps = 8/104 (7%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKF-SEVVGAIKNDIDQK 55 S I + QR+ V++N++N + G ++ + F SEV A+ ++ Sbjct: 8 SLKISSSGLRVQSQRMRIVSENLANVQSTGDTPGANPYQRKTITFKSEVDRALGANLVAV 67 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 + + +Y + S + + + Sbjct: 68 KNIGSDKGDYRVEFDPSHPAADENGNVKYPNVNTLIELADMREA 111 >gi|217959227|ref|YP_002337775.1| flagellar basal body rod protein FlgB [Bacillus cereus AH187] gi|229138443|ref|ZP_04267032.1| Flagellar basal-body rod protein [Bacillus cereus BDRD-ST26] gi|217063551|gb|ACJ77801.1| flagellar basal-body rod protein FlgB [Bacillus cereus AH187] gi|228644980|gb|EEL01223.1| Flagellar basal-body rod protein [Bacillus cereus BDRD-ST26] Length = 135 Score = 41.0 bits (94), Expect = 0.16, Method: Composition-based stats. Identities = 12/72 (16%), Positives = 29/72 (40%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 L + +TV+ N++N +T G++ V F+E + + + + + Sbjct: 12 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKSNTADLKTNADLYQTNEM 71 Query: 72 SFISTGTELDFA 83 + T+ +A Sbjct: 72 HLPTVNTKNTYA 83 >gi|163794627|ref|ZP_02188597.1| putative flagellar basal-body rod protein flgC [alpha proteobacterium BAL199] gi|159179900|gb|EDP64425.1| putative flagellar basal-body rod protein flgC [alpha proteobacterium BAL199] Length = 138 Score = 41.0 bits (94), Expect = 0.16, Method: Composition-based stats. Identities = 5/42 (11%), Positives = 15/42 (35%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G + N + + E I ++ + I ++ + + Sbjct: 93 GLVHRPNVDLVRETADQISGQRQLEANLATIRAADELLQATL 134 >gi|157692297|ref|YP_001486759.1| flagellar basal body rod protein FlgB [Bacillus pumilus SAFR-032] gi|157681055|gb|ABV62199.1| flagellar basal body rod protein [Bacillus pumilus SAFR-032] Length = 129 Score = 41.0 bits (94), Expect = 0.16, Method: Composition-based stats. Identities = 7/36 (19%), Positives = 19/36 (52%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV 45 A + +++N++N DT +++ V F +++ Sbjct: 13 NALGRANVKQKVISNNIANIDTPNYKSKNVAFHDML 48 >gi|110641258|ref|YP_668988.1| flagellar hook-associated protein FlgK [Escherichia coli 536] gi|191172473|ref|ZP_03034014.1| flagellar hook-associated protein FlgK [Escherichia coli F11] gi|300982573|ref|ZP_07176195.1| flagellar hook-associated protein FlgK [Escherichia coli MS 200-1] gi|110342850|gb|ABG69087.1| flagellar hook-associated protein 1 [Escherichia coli 536] gi|190907357|gb|EDV66955.1| flagellar hook-associated protein FlgK [Escherichia coli F11] gi|300307154|gb|EFJ61674.1| flagellar hook-associated protein FlgK [Escherichia coli MS 200-1] gi|324013281|gb|EGB82500.1| flagellar hook-associated protein FlgK [Escherichia coli MS 60-1] Length = 547 Score = 41.0 bits (94), Expect = 0.16, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|188492078|ref|ZP_02999348.1| flagellar hook-associated protein FlgK [Escherichia coli 53638] gi|188487277|gb|EDU62380.1| flagellar hook-associated protein FlgK [Escherichia coli 53638] Length = 547 Score = 41.0 bits (94), Expect = 0.16, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|317047697|ref|YP_004115345.1| flagellar hook-associated protein FlgK [Pantoea sp. At-9b] gi|316949314|gb|ADU68789.1| flagellar hook-associated protein FlgK [Pantoea sp. At-9b] Length = 547 Score = 41.0 bits (94), Expect = 0.16, Method: Composition-based stats. Identities = 22/193 (11%), Positives = 49/193 (25%), Gaps = 1/193 (0%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + N ++ A + LST ++N+SN G+ + + + + V Sbjct: 1 MSSIINSAMSGLSAAQAALSTTSNNISNYTVAGYTRQTTILGQA-NSTLSGNSYYGNGVT 59 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + + + ++ S +L+ T + Sbjct: 60 VTGVQREYDEFITAQLRSASATYNAQNTQYSQISNIDDLLSTSTTSLSTSIQDFFTNVQN 119 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180 Q + V + +Q + T + S + S I+ Sbjct: 120 VVSNADDPSARQSMLSNAQGLVNQFQTTAQYLTNMQTSVNTDITSSVDQINTYTSQIANL 179 Query: 181 IPPTPLEDLSGVT 193 T Sbjct: 180 NTQIAKLTTGDGT 192 >gi|120597311|ref|YP_961885.1| flagellar hook-associated protein FlgK [Shewanella sp. W3-18-1] gi|120557404|gb|ABM23331.1| flagellar hook-associated protein FlgK [Shewanella sp. W3-18-1] Length = 457 Score = 41.0 bits (94), Expect = 0.16, Method: Composition-based stats. Identities = 10/39 (25%), Positives = 19/39 (48%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 + NIG + LA L+ ++N++N G+ +V Sbjct: 1 MSMLNIGKSGLLASMAALNATSNNVANAMVAGYSRQQVM 39 Score = 40.2 bits (92), Expect = 0.28, Method: Composition-based stats. Identities = 6/39 (15%), Positives = 13/39 (33%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S N E +I Q + + +I ++ + Sbjct: 417 TSGVNPDEEGINLIIYQQSYMANAKVISTADQLFQTMLS 455 >gi|42780836|ref|NP_978083.1| flagellar basal body rod protein FlgB [Bacillus cereus ATCC 10987] gi|42736756|gb|AAS40691.1| flagellar basal-body rod protein FlgB [Bacillus cereus ATCC 10987] Length = 135 Score = 41.0 bits (94), Expect = 0.16, Method: Composition-based stats. Identities = 12/72 (16%), Positives = 29/72 (40%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 L + +TV+ N++N +T G++ V F+E + + + + + Sbjct: 12 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKSNTTDLKTNADLYQTNEM 71 Query: 72 SFISTGTELDFA 83 + T+ +A Sbjct: 72 HLPTVNTKNTYA 83 >gi|28897549|ref|NP_797154.1| flagellar basal body rod protein FlgB [Vibrio parahaemolyticus RIMD 2210633] gi|153839689|ref|ZP_01992356.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus AQ3810] gi|260364608|ref|ZP_05777210.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus K5030] gi|260898117|ref|ZP_05906613.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus Peru-466] gi|260901950|ref|ZP_05910345.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus AQ4037] gi|5361005|gb|AAD42912.1|U12817_6 polar flagellar FlgB homolog [Vibrio parahaemolyticus] gi|28805761|dbj|BAC59038.1| polar flagellar FlgB [Vibrio parahaemolyticus RIMD 2210633] gi|149746799|gb|EDM57787.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus AQ3810] gi|308086116|gb|EFO35811.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus Peru-466] gi|308106785|gb|EFO44325.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus AQ4037] gi|308115123|gb|EFO52663.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus K5030] gi|328473456|gb|EGF44304.1| flagellar basal body rod protein FlgB [Vibrio parahaemolyticus 10329] Length = 131 Score = 41.0 bits (94), Expect = 0.16, Method: Composition-based stats. Identities = 6/38 (15%), Positives = 19/38 (50%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 E+ ++ N++ +T G++ + F++ + A + Sbjct: 20 ERNAEVISTNIAQANTPGYKARGLDFAKELQAATSGAS 57 >gi|126463751|ref|YP_001044865.1| flagellar basal body rod protein FlgB [Rhodobacter sphaeroides ATCC 17029] gi|332559807|ref|ZP_08414129.1| FlgB2 [Rhodobacter sphaeroides WS8N] gi|126105415|gb|ABN78093.1| flagellar basal-body rod protein FlgB [Rhodobacter sphaeroides ATCC 17029] gi|332277519|gb|EGJ22834.1| FlgB2 [Rhodobacter sphaeroides WS8N] Length = 127 Score = 41.0 bits (94), Expect = 0.16, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 15/44 (34%), Gaps = 1/44 (2%) Query: 8 GLAAQLALEQRLSTVADNMSNTDTVGFRT-IKVKFSEVVGAIKN 50 + R VA N++N DT G+R +F Sbjct: 11 AQSMARHAGLRTEVVAHNLANADTPGYRAQDLPEFESYASGTVG 54 >gi|332187874|ref|ZP_08389607.1| flagellar basal-body rod protein FlgC [Sphingomonas sp. S17] gi|332012035|gb|EGI54107.1| flagellar basal-body rod protein FlgC [Sphingomonas sp. S17] Length = 136 Score = 41.0 bits (94), Expect = 0.16, Method: Composition-based stats. Identities = 3/35 (8%), Positives = 15/35 (42%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 + E+ M+ + + + ++ + +L+ + Sbjct: 98 VDETRELVDMMETARTYQNNVEVMQTAKSLILDTL 132 Score = 35.6 bits (80), Expect = 5.5, Method: Composition-based stats. Identities = 16/126 (12%), Positives = 37/126 (29%), Gaps = 10/126 (7%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTD------TVGFRTIKVKFSEVVGAIKN----D 51 + F + A A R++T A N++N ++T+K F A D Sbjct: 6 LSIFQVSGRAMSAQLVRMNTTASNLANAGGIAGSVETAYKTMKPVFRTSFDAATGLSTVD 65 Query: 52 IDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDD 111 +++ ++ + G + A++ + T Sbjct: 66 VEKIVTAGEDPTKRHDPNNPLADKDGNVFEAAVDETRELVDMMETARTYQNNVEVMQTAK 125 Query: 112 GSLVSA 117 ++ Sbjct: 126 SLILDT 131 >gi|253996322|ref|YP_003048386.1| flagellar basal-body rod protein FlgB [Methylotenera mobilis JLW8] gi|253983001|gb|ACT47859.1| flagellar basal-body rod protein FlgB [Methylotenera mobilis JLW8] Length = 135 Score = 41.0 bits (94), Expect = 0.16, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 28/85 (32%), Gaps = 4/85 (4%) Query: 1 MQTSFNIGLA----AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56 M + L+ A QR +A N++N DT ++ + F + + K Sbjct: 1 MINKLDAALSFHQNALRVRGQRQELIAANIANADTPNYKARDLDFGAAMKSAMAGAANKE 60 Query: 57 SFVASGKEYLSKEVGSFISTGTELD 81 +F + + G + Sbjct: 61 AFNTNKTSDKHLDGIPSSIGGGAMF 85 >gi|206974988|ref|ZP_03235903.1| flagellar basal-body rod protein FlgB [Bacillus cereus H3081.97] gi|206747007|gb|EDZ58399.1| flagellar basal-body rod protein FlgB [Bacillus cereus H3081.97] Length = 135 Score = 41.0 bits (94), Expect = 0.16, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 29/72 (40%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 L + +TV+ N++N +T G++ V F+E + + + S + Sbjct: 12 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKSNAADLKSNPDLYQTNEM 71 Query: 72 SFISTGTELDFA 83 + T+ +A Sbjct: 72 HLPTVNTKNTYA 83 >gi|115523176|ref|YP_780087.1| flagellar basal body rod protein FlgB [Rhodopseudomonas palustris BisA53] gi|115517123|gb|ABJ05107.1| flagellar basal body rod protein [Rhodopseudomonas palustris BisA53] Length = 134 Score = 41.0 bits (94), Expect = 0.16, Method: Composition-based stats. Identities = 8/36 (22%), Positives = 21/36 (58%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 F++ + L R ++++ N++N +T G+R ++ Sbjct: 14 FDVASSHAQWLSLRQASISSNVANANTPGYRAQDIE 49 >gi|258621046|ref|ZP_05716080.1| Flagellar basal-body rod protein flgB [Vibrio mimicus VM573] gi|258625274|ref|ZP_05720182.1| Flagellar basal-body rod protein flgB [Vibrio mimicus VM603] gi|262170822|ref|ZP_06038500.1| flagellar basal-body rod protein FlgB [Vibrio mimicus MB-451] gi|258582447|gb|EEW07288.1| Flagellar basal-body rod protein flgB [Vibrio mimicus VM603] gi|258586434|gb|EEW11149.1| Flagellar basal-body rod protein flgB [Vibrio mimicus VM573] gi|261891898|gb|EEY37884.1| flagellar basal-body rod protein FlgB [Vibrio mimicus MB-451] Length = 131 Score = 41.0 bits (94), Expect = 0.16, Method: Composition-based stats. Identities = 15/95 (15%), Positives = 31/95 (32%), Gaps = 10/95 (10%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID----------QKISFVASGKEY 65 E+ +A N++ +T GF+ + F + + A + S +G+ Sbjct: 20 ERNSEVIATNIAQANTPGFKAKGMDFQKALQAASSGASISLSRTDGRHIPASSTVTGEIL 79 Query: 66 LSKEVGSFISTGTELDFALEGDAWFALESPRGIIL 100 G +D LE + + + L Sbjct: 80 YRTPTQPDTGDGNTVDVDLERNMFMQNQIRHQASL 114 >gi|254463526|ref|ZP_05076942.1| flagellar basal-body rod protein FlgB [Rhodobacterales bacterium HTCC2083] gi|206680115|gb|EDZ44602.1| flagellar basal-body rod protein FlgB [Rhodobacteraceae bacterium HTCC2083] Length = 128 Score = 41.0 bits (94), Expect = 0.16, Method: Composition-based stats. Identities = 10/45 (22%), Positives = 19/45 (42%) Query: 9 LAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 +A R + +A N++N T G++ + F + A D Sbjct: 12 ASALSLRSARNNMLASNIANAATPGYKARDMDFDREMSARIGDSP 56 >gi|91225870|ref|ZP_01260839.1| flagellar basal-body rod protein B [Vibrio alginolyticus 12G01] gi|262394942|ref|YP_003286796.1| flagellar basal-body rod protein FlgB [Vibrio sp. Ex25] gi|269965427|ref|ZP_06179546.1| Flagellar basal-body rod protein flgB [Vibrio alginolyticus 40B] gi|91189520|gb|EAS75796.1| flagellar basal-body rod protein B [Vibrio alginolyticus 12G01] gi|262338536|gb|ACY52331.1| flagellar basal-body rod protein FlgB [Vibrio sp. Ex25] gi|269829906|gb|EEZ84136.1| Flagellar basal-body rod protein flgB [Vibrio alginolyticus 40B] Length = 131 Score = 41.0 bits (94), Expect = 0.16, Method: Composition-based stats. Identities = 6/38 (15%), Positives = 19/38 (50%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 E+ ++ N++ +T G++ + F++ + A + Sbjct: 20 ERNAEVISTNIAQANTPGYKARGLDFAKELQAATSGAS 57 >gi|324325761|gb|ADY21021.1| flagellar basal body rod protein FlgB [Bacillus thuringiensis serovar finitimus YBT-020] Length = 135 Score = 41.0 bits (94), Expect = 0.16, Method: Composition-based stats. Identities = 12/72 (16%), Positives = 29/72 (40%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 L + +TV+ N++N +T G++ V F+E + + + + + Sbjct: 12 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKSNTADLKTNADLYQTNEM 71 Query: 72 SFISTGTELDFA 83 + T+ +A Sbjct: 72 HLPTVNTKNTYA 83 >gi|321445153|gb|EFX60611.1| hypothetical protein DAPPUDRAFT_342411 [Daphnia pulex] Length = 136 Score = 41.0 bits (94), Expect = 0.16, Method: Composition-based stats. Identities = 9/37 (24%), Positives = 19/37 (51%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA 47 A + +R +A N++N DT G++ + F+ + Sbjct: 15 ALVLRSERQRLLASNIANADTPGYKARDMDFASALRE 51 >gi|322832561|ref|YP_004212588.1| flagellar basal-body rod protein FlgB [Rahnella sp. Y9602] gi|321167762|gb|ADW73461.1| flagellar basal-body rod protein FlgB [Rahnella sp. Y9602] Length = 136 Score = 41.0 bits (94), Expect = 0.16, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 27/79 (34%), Gaps = 4/79 (5%) Query: 1 MQTSFNIGL----AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56 M N L A QR ++ N++N DT G++ + F+ + + Sbjct: 1 MLDKLNAALQFQQEALNLRAQRQEILSANIANADTPGYQARDIDFASQLQKVMEQGRASG 60 Query: 57 SFVASGKEYLSKEVGSFIS 75 S ++ S + Sbjct: 61 SGISLSLTSDRHIPASNVQ 79 >gi|283833624|ref|ZP_06353365.1| flagellar hook-associated protein FlgK [Citrobacter youngae ATCC 29220] gi|291071307|gb|EFE09416.1| flagellar hook-associated protein FlgK [Citrobacter youngae ATCC 29220] Length = 550 Score = 41.0 bits (94), Expect = 0.16, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLSAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|228907376|ref|ZP_04071234.1| Flagellar basal-body rod protein [Bacillus thuringiensis IBL 200] gi|228852237|gb|EEM97033.1| Flagellar basal-body rod protein [Bacillus thuringiensis IBL 200] Length = 135 Score = 41.0 bits (94), Expect = 0.16, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 29/72 (40%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 L + +TV+ N++N +T G++ V F+E + + + S + Sbjct: 12 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMKKSSALYKNNAADLKSNPDLYQTNEM 71 Query: 72 SFISTGTELDFA 83 + T+ +A Sbjct: 72 HLPTVNTKNTYA 83 >gi|153831731|ref|ZP_01984398.1| flagellar basal-body rod protein FlgC [Vibrio harveyi HY01] gi|156976139|ref|YP_001447045.1| flagellar basal body rod protein FlgC [Vibrio harveyi ATCC BAA-1116] gi|269960114|ref|ZP_06174490.1| Flagellar basal-body rod protein C [Vibrio harveyi 1DA3] gi|148872241|gb|EDL71058.1| flagellar basal-body rod protein FlgC [Vibrio harveyi HY01] gi|156527733|gb|ABU72818.1| hypothetical protein VIBHAR_04910 [Vibrio harveyi ATCC BAA-1116] gi|269835085|gb|EEZ89168.1| Flagellar basal-body rod protein C [Vibrio harveyi 1DA3] Length = 144 Score = 40.6 bits (93), Expect = 0.17, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 19/43 (44%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ + + + EM M+ T+ F + ++ + +R Sbjct: 97 GYVYYPDIDVVSEMADMMSATRSFETNVEVLTNVKSMQQGLLR 139 Score = 34.8 bits (78), Expect = 9.5, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 35/96 (36%), Gaps = 6/96 (6%) Query: 10 AAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +A A RL+TVA N++N D V ++ +K F+ V + + + A + Sbjct: 12 SAMTAQTVRLNTVASNLANADAVSANPDDAYKALKPVFATVYQKTQMATENGVYPNAEVR 71 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 + E + L D + ++ Sbjct: 72 IVDVVQNAGQAEKRFEPNNPLANDEGYVYYPDIDVV 107 >gi|188493729|ref|ZP_03000999.1| flagellar basal-body rod protein FlgB [Escherichia coli 53638] gi|188488928|gb|EDU64031.1| flagellar basal-body rod protein FlgB [Escherichia coli 53638] Length = 138 Score = 40.6 bits (93), Expect = 0.17, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 22/62 (35%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR +A N++N DT G++ + F+ + + S VA Sbjct: 15 ALNLRAQRQEVLAANIANADTPGYQARDIDFASELKKVMQRGRDATSVVALTMTSTQHIP 74 Query: 71 GS 72 Sbjct: 75 AQ 76 >gi|332088753|gb|EGI93865.1| flagellar basal-body rod protein FlgB [Shigella boydii 5216-82] Length = 138 Score = 40.6 bits (93), Expect = 0.17, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 22/62 (35%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR +A N++N DT G++ + F+ + + S VA Sbjct: 15 ALNLRAQRQEVLAANIANADTPGYQARDIDFASELKKVMQRGRDATSVVALTMTSTQHIP 74 Query: 71 GS 72 Sbjct: 75 AQ 76 >gi|323976545|gb|EGB71633.1| flagellar hook protein FlgK [Escherichia coli TW10509] Length = 547 Score = 40.6 bits (93), Expect = 0.17, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|300950179|ref|ZP_07164123.1| flagellar hook-associated protein FlgK [Escherichia coli MS 116-1] gi|300450464|gb|EFK14084.1| flagellar hook-associated protein FlgK [Escherichia coli MS 116-1] Length = 547 Score = 40.6 bits (93), Expect = 0.17, Method: Composition-based stats. Identities = 10/81 (12%), Positives = 26/81 (32%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + N ++ A + L+T ++N+S+ + G+ + + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMEQANSTLGAGGWGGNGVYV 60 Query: 61 SGKEYLSKEVGSFISTGTELD 81 SG + + + Sbjct: 61 SGVQREYDAFITNQLRAAQTQ 81 >gi|293408373|ref|ZP_06652212.1| flagellar hook-associated protein FlgK [Escherichia coli B354] gi|291471551|gb|EFF14034.1| flagellar hook-associated protein FlgK [Escherichia coli B354] Length = 458 Score = 40.6 bits (93), Expect = 0.17, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 23/78 (29%), Gaps = 2/78 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M NIG + + L+ A N +N T G+ + S + GA + + V Sbjct: 1 MD-MINIGYSGASTAQVELNVTAQNTANAMTTGYTRQVAEISTI-GASGGSPNSAGNGVQ 58 Query: 61 SGKEYLSKEVGSFISTGT 78 Sbjct: 59 VDSIRRVSNQYQVNQVWY 76 >gi|56413839|ref|YP_150914.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197362762|ref|YP_002142399.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56128096|gb|AAV77602.1| putative flagellar basal-body rod protein FlgB (proximal rod protein) [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197094239|emb|CAR59744.1| putative flagellar basal-body rod protein FlgB (proximal rod protein) [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 138 Score = 40.6 bits (93), Expect = 0.17, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 26/66 (39%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR +A N++N DT G++ + F+ + + ++ VA Sbjct: 15 ALNLRAQRQEILAANIANADTPGYQARDIDFTSELKKVMVRGREETGGVALTLTSSHHIP 74 Query: 71 GSFIST 76 +S+ Sbjct: 75 AQAVSS 80 >gi|323191378|gb|EFZ76640.1| flagellar hook-associated protein FlgK [Escherichia coli RN587/1] Length = 458 Score = 40.6 bits (93), Expect = 0.17, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 23/78 (29%), Gaps = 2/78 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M NIG + + L+ A N +N T G+ + S + GA + + V Sbjct: 1 MD-MINIGYSGASTAQVELNVTAQNTANAMTTGYTRQVAEISTI-GASGGSPNSAGNGVQ 58 Query: 61 SGKEYLSKEVGSFISTGT 78 Sbjct: 59 VDSIRRVSNQYQVNQVWY 76 >gi|77464909|ref|YP_354413.1| flagellar basal body rod protein FlgB [Rhodobacter sphaeroides 2.4.1] gi|77389327|gb|ABA80512.1| hypothetical protein RSP_1331 [Rhodobacter sphaeroides 2.4.1] Length = 127 Score = 40.6 bits (93), Expect = 0.17, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 14/44 (31%), Gaps = 1/44 (2%) Query: 8 GLAAQLALEQRLSTVADNMSNTDTVGFRT-IKVKFSEVVGAIKN 50 + R VA N++N DT G+R F Sbjct: 11 AQSMARHAGLRTEVVAHNLANADTPGYRAQDLPDFESYASGTVG 54 >gi|320107020|ref|YP_004182610.1| flagellar basal-body rod protein FlgC [Terriglobus saanensis SP1PR4] gi|319925541|gb|ADV82616.1| flagellar basal-body rod protein FlgC [Terriglobus saanensis SP1PR4] Length = 152 Score = 40.6 bits (93), Expect = 0.17, Method: Composition-based stats. Identities = 8/37 (21%), Positives = 17/37 (45%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 GF+E + N + EM ++ T+ + T + + Sbjct: 107 GFVEYPDINPLTEMVDLMGATRSYGLNATALQAEKGM 143 Score = 36.8 bits (83), Expect = 2.8, Method: Composition-based stats. Identities = 10/29 (34%), Positives = 14/29 (48%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTV 32 +I +A A R VA NM+N +T Sbjct: 6 MMDISASALHAQRVRAEVVATNMANAETT 34 >gi|212709489|ref|ZP_03317617.1| hypothetical protein PROVALCAL_00531 [Providencia alcalifaciens DSM 30120] gi|212687827|gb|EEB47355.1| hypothetical protein PROVALCAL_00531 [Providencia alcalifaciens DSM 30120] Length = 137 Score = 40.6 bits (93), Expect = 0.17, Method: Composition-based stats. Identities = 12/64 (18%), Positives = 25/64 (39%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A E R + +A N++N DT G++ + F+ + + K ++ Sbjct: 15 ALSIREARQTVLASNIANADTPGYQARDIDFNRQLQQAMDKGVVKGKGISLAVTAKGHIE 74 Query: 71 GSFI 74 G + Sbjct: 75 GHDM 78 >gi|163758013|ref|ZP_02165101.1| flagellar basal-body rod protein C [Hoeflea phototrophica DFL-43] gi|162284302|gb|EDQ34585.1| flagellar basal-body rod protein C [Hoeflea phototrophica DFL-43] Length = 142 Score = 40.6 bits (93), Expect = 0.17, Method: Composition-based stats. Identities = 5/47 (10%), Positives = 19/47 (40%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 G ++ N N + E+ M + + + + + + + + + + Sbjct: 94 GMVKLPNVNVLVELADMREANRSYEANLQTVKQTRELVSMTLDLLRA 140 Score = 39.1 bits (89), Expect = 0.55, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 20/43 (46%), Gaps = 7/43 (16%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFS 42 I + E R+ +++N++N+ + G +R + FS Sbjct: 13 IASSGLDVQETRMRILSENLANSQSTGDTPGADAYRRKTISFS 55 >gi|119947179|ref|YP_944859.1| flagellar basal-body rod protein FlgC [Psychromonas ingrahamii 37] gi|119865783|gb|ABM05260.1| flagellar basal-body rod protein FlgC [Psychromonas ingrahamii 37] Length = 142 Score = 40.6 bits (93), Expect = 0.17, Method: Composition-based stats. Identities = 6/40 (15%), Positives = 16/40 (40%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 S + + EM M+ ++ F +++ + I + Sbjct: 101 SGIDVVSEMADMMSASRSFEMNVEVLNNAKSMQQSLISVL 140 Score = 36.0 bits (81), Expect = 4.7, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 29/87 (33%), Gaps = 6/87 (6%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQK 55 Q F +A A RL+T++ N++N D+ F+ +K F+ + + N Sbjct: 4 QQIFLTAGSAMTAQTVRLNTISSNLANADSFSGNKEDVFKPLKPIFATIYNNMNNGSASN 63 Query: 56 ISFVASGKEYLSKEVGSFISTGTELDF 82 I + + Sbjct: 64 IRSAQVMVADVIATDSLTQQRHEPENP 90 >gi|229096229|ref|ZP_04227202.1| Flagellar basal-body rod protein [Bacillus cereus Rock3-29] gi|228687189|gb|EEL41094.1| Flagellar basal-body rod protein [Bacillus cereus Rock3-29] Length = 138 Score = 40.6 bits (93), Expect = 0.17, Method: Composition-based stats. Identities = 12/72 (16%), Positives = 28/72 (38%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 L + +TV+ N++N +T G++ V F+E + + + S + Sbjct: 15 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMSKSSALYKNNAADLKSNPDLYQTNEM 74 Query: 72 SFISTGTELDFA 83 + + +A Sbjct: 75 HLPTVNMKNTYA 86 >gi|224373714|ref|YP_002608086.1| flagellar basal body rod protein FlgB [Nautilia profundicola AmH] gi|223588710|gb|ACM92446.1| flagellar basal-body rod protein FlgB [Nautilia profundicola AmH] Length = 143 Score = 40.6 bits (93), Expect = 0.17, Method: Composition-based stats. Identities = 10/33 (30%), Positives = 18/33 (54%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50 R +A N++N DT +R ++F E + A + Sbjct: 22 RQDMIASNIANADTPYYRPKDIRFEEALQAEVD 54 >gi|207091983|ref|ZP_03239770.1| flagellar basal body rod protein FlgC [Helicobacter pylori HPKX_438_AG0C1] Length = 89 Score = 40.6 bits (93), Expect = 0.17, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 6/49 (12%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTV----G--FRTIKVKFSEV 44 +SF+I A R + ++ N++N +T G +R + F Sbjct: 3 LSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFKAF 51 >gi|221199736|ref|ZP_03572779.1| flagellar basal-body rod protein FlgB [Burkholderia multivorans CGD2M] gi|221208659|ref|ZP_03581659.1| flagellar basal-body rod protein FlgB [Burkholderia multivorans CGD2] gi|221215568|ref|ZP_03588531.1| flagellar basal-body rod protein FlgB [Burkholderia multivorans CGD1] gi|221164556|gb|EED97039.1| flagellar basal-body rod protein FlgB [Burkholderia multivorans CGD1] gi|221171470|gb|EEE03917.1| flagellar basal-body rod protein FlgB [Burkholderia multivorans CGD2] gi|221179975|gb|EEE12379.1| flagellar basal-body rod protein FlgB [Burkholderia multivorans CGD2M] Length = 162 Score = 40.6 bits (93), Expect = 0.17, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 18/43 (41%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 A R ++ N++N DT G+R V F+ + + Sbjct: 15 ALDVRAYRQELLSSNIANADTPGYRARDVDFASTLARSLKQAN 57 >gi|94500238|ref|ZP_01306771.1| flagellar basal body rod protein [Oceanobacter sp. RED65] gi|94427537|gb|EAT12514.1| flagellar basal body rod protein [Oceanobacter sp. RED65] Length = 131 Score = 40.6 bits (93), Expect = 0.17, Method: Composition-based stats. Identities = 10/71 (14%), Positives = 28/71 (39%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTG 77 R +A+N++N DT ++ + F+ ++ + + ++ V + Sbjct: 23 RAEILANNLANADTPHYKARDIDFNAMLDGAMSSRSIGMEKTHKAHISGNQSVDDSLKYR 82 Query: 78 TELDFALEGDA 88 A++G+ Sbjct: 83 NPYQPAIDGNT 93 >gi|16760050|ref|NP_455667.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29142179|ref|NP_805521.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213161847|ref|ZP_03347557.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213424677|ref|ZP_03357442.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213582034|ref|ZP_03363860.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213615929|ref|ZP_03371755.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213648923|ref|ZP_03378976.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213865508|ref|ZP_03387627.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|289828583|ref|ZP_06546408.1| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|291084685|ref|ZP_06540939.2| flagellar basal body rod protein FlgB [Salmonella enterica subsp. enterica serovar Typhi str. AG3] gi|25298905|pir||AG0639 probable flagellar basal-body rod protein FlgB (proximal rod protein) STY1213 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16502344|emb|CAD08298.1| putative flagellar basal-body rod protein FlgB (proximal rod protein) [Salmonella enterica subsp. enterica serovar Typhi] gi|29137809|gb|AAO69370.1| putative flagellar basal-body rod protein FlgB [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 138 Score = 40.6 bits (93), Expect = 0.17, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 26/66 (39%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR +A N++N DT G++ + F+ + + ++ VA Sbjct: 15 ALNLRAQRQEILAANIANADTPGYQARDIDFASELKKVMVRGREETGGVALSLTSSRHIP 74 Query: 71 GSFIST 76 +S+ Sbjct: 75 AQAVSS 80 >gi|312884837|ref|ZP_07744529.1| flagellar basal body rod protein FlgB [Vibrio caribbenthicus ATCC BAA-2122] gi|309367489|gb|EFP95049.1| flagellar basal body rod protein FlgB [Vibrio caribbenthicus ATCC BAA-2122] Length = 120 Score = 40.6 bits (93), Expect = 0.17, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 31/85 (36%), Gaps = 1/85 (1%) Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76 QR +A N++N DT G+ + F+ VV + + K + S + Sbjct: 21 QRTKVLASNLANVDTPGYLAKDLSFATVVSQVSSQGVDKPIPKLDIQSQYSVPYQNSK-N 79 Query: 77 GTELDFALEGDAWFALESPRGIILT 101 G ++ +E + LT Sbjct: 80 GNTVELGVEQGKFTQNNMDFQTSLT 104 >gi|229195956|ref|ZP_04322709.1| Flagellar basal-body rod protein [Bacillus cereus m1293] gi|228587515|gb|EEK45580.1| Flagellar basal-body rod protein [Bacillus cereus m1293] Length = 135 Score = 40.6 bits (93), Expect = 0.17, Method: Composition-based stats. Identities = 11/72 (15%), Positives = 28/72 (38%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 L + +TV+ N++N +T G++ V F+E + + + + + Sbjct: 12 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKSNTADLKTNADLYQTNEM 71 Query: 72 SFISTGTELDFA 83 + + +A Sbjct: 72 HLPTVNAKNTYA 83 >gi|170768131|ref|ZP_02902584.1| flagellar hook-associated protein FlgK [Escherichia albertii TW07627] gi|170122897|gb|EDS91828.1| flagellar hook-associated protein FlgK [Escherichia albertii TW07627] Length = 547 Score = 40.6 bits (93), Expect = 0.18, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQAKSTLGAGG 52 >gi|167623358|ref|YP_001673652.1| flagellar basal body rod protein FlgB [Shewanella halifaxensis HAW-EB4] gi|167353380|gb|ABZ75993.1| flagellar basal-body rod protein FlgB [Shewanella halifaxensis HAW-EB4] Length = 132 Score = 40.6 bits (93), Expect = 0.18, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 25/59 (42%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFI 74 QR ++ N++N DT ++ V FS+ +GA ++ + K + + Sbjct: 20 SQRAEVLSSNIANADTPNYKARDVDFSKAMGAAQSQQSGLAMTKSDTKHFDMAALTQQH 78 >gi|229121295|ref|ZP_04250526.1| Flagellar basal-body rod protein [Bacillus cereus 95/8201] gi|228662140|gb|EEL17749.1| Flagellar basal-body rod protein [Bacillus cereus 95/8201] Length = 135 Score = 40.6 bits (93), Expect = 0.18, Method: Composition-based stats. Identities = 10/32 (31%), Positives = 19/32 (59%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 L + +TV+ N++N +T G++ V F+E Sbjct: 12 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAE 43 >gi|206890640|ref|YP_002248112.1| flagellar basal-body rod protein FlgB [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742578|gb|ACI21635.1| flagellar basal-body rod protein FlgB [Thermodesulfovibrio yellowstonii DSM 11347] Length = 111 Score = 40.6 bits (93), Expect = 0.18, Method: Composition-based stats. Identities = 14/102 (13%), Positives = 31/102 (30%), Gaps = 3/102 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M S I R +A N++N DT ++ + F E + + + + Sbjct: 1 MDKSIKILEKVMDICTYRQKILASNIANADTPNYKAKDINFQEELKKAAESHNAEYKVIE 60 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTR 102 + +++ + A + + TR Sbjct: 61 APTTMPNRDGNTVNIEVEMTKLA---ETMLMYNGATQLFSTR 99 >gi|330830297|ref|YP_004393249.1| flagellar hook-associated protein FlgK [Aeromonas veronii B565] gi|328805433|gb|AEB50632.1| Flagellar hook-associated protein FlgK [Aeromonas veronii B565] Length = 667 Score = 40.6 bits (93), Expect = 0.18, Method: Composition-based stats. Identities = 9/35 (25%), Positives = 19/35 (54%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39 IG + LA ++ L T ++N+ N ++ G+ + Sbjct: 6 LGIGSSGVLAQQRLLQTTSNNIVNVNSQGYVRERT 40 >gi|228984827|ref|ZP_04144999.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228775025|gb|EEM23419.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 135 Score = 40.6 bits (93), Expect = 0.18, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 29/72 (40%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 L + +TV+ N++N +T G++ V F+E + + + S + Sbjct: 12 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNEM 71 Query: 72 SFISTGTELDFA 83 + T+ +A Sbjct: 72 HLPTVNTKNTYA 83 >gi|163742564|ref|ZP_02149950.1| flagellar hook-associated protein K [Phaeobacter gallaeciensis 2.10] gi|161384149|gb|EDQ08532.1| flagellar hook-associated protein K [Phaeobacter gallaeciensis 2.10] Length = 472 Score = 40.6 bits (93), Expect = 0.18, Method: Composition-based stats. Identities = 20/175 (11%), Positives = 53/175 (30%), Gaps = 3/175 (1%) Query: 67 SKEVGSFISTGTELDFALEGDA--WFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVL 124 + + T T D + D +F + GI + K+ G + + + Sbjct: 298 RFQDPALDPTLTATDPGIFTDQGAFFDPANTVGIANRIELNDKIAMQGQAETWRLRDGLN 357 Query: 125 DMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPT 184 + + + + + T L + +S + R + Sbjct: 358 AASPGNAGDATLLRGYADALDAKRTVSSVGLGTANLDASTLSANLLSRFAQSKNSAEQNV 417 Query: 185 PLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + + + L +S E+ +I + + + + +I ++ M +R Sbjct: 418 AFAAATYTEMYQRELAQG-VDSDAELQNLIVIEKVYQANARMISVVDELMETLLR 471 Score = 34.8 bits (78), Expect = 9.2, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 28/87 (32%), Gaps = 5/87 (5%) Query: 9 LAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSK 68 + A + S V++N+SN T G+ + D + + Sbjct: 1 MTGLTAAGRSTSVVSENLSNVLTPGYSR-----RSLALTSAGDGFSGVKVGHVQRINDPA 55 Query: 69 EVGSFISTGTELDFALEGDAWFALESP 95 S S +E+ A A+F + Sbjct: 56 LQSSVRSANSEVGVAEVKSAFFGRMTE 82 >gi|294140181|ref|YP_003556159.1| flagellar basal-body rod protein FlgB [Shewanella violacea DSS12] gi|293326650|dbj|BAJ01381.1| flagellar basal-body rod protein FlgB [Shewanella violacea DSS12] Length = 132 Score = 40.6 bits (93), Expect = 0.18, Method: Composition-based stats. Identities = 10/66 (15%), Positives = 23/66 (34%), Gaps = 2/66 (3%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A R +A N++N DT ++ V F + + A + + + + + + Sbjct: 17 GIRAQ--RAEVIASNIANADTPHYKARDVNFDKALQAASSRQGGLAMSSSDSRHFDLEAL 74 Query: 71 GSFIST 76 Sbjct: 75 SQQNYG 80 >gi|262273532|ref|ZP_06051346.1| flagellar basal-body rod protein FlgB [Grimontia hollisae CIP 101886] gi|262222510|gb|EEY73821.1| flagellar basal-body rod protein FlgB [Grimontia hollisae CIP 101886] Length = 124 Score = 40.6 bits (93), Expect = 0.19, Method: Composition-based stats. Identities = 13/104 (12%), Positives = 34/104 (32%) Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76 QR +A N++N DT ++ + F + + +I + ++ + + + Sbjct: 21 QRAKVIAGNLANVDTPNYKARDISFEQAMDSIASRARMNHIQRRDVSQHYTLQYREPMQP 80 Query: 77 GTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + + G T + +G + G+ Sbjct: 81 SQDGNTVELGVEQAKFAENAMAFETSMTFLNMKLNGLREAIKGQ 124 >gi|119899030|ref|YP_934243.1| flagellar basal-body rod protein FlgB [Azoarcus sp. BH72] gi|119671443|emb|CAL95356.1| flagellar basal-body rod protein FlgB [Azoarcus sp. BH72] Length = 133 Score = 40.6 bits (93), Expect = 0.19, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 16/41 (39%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50 A R +A N++N DT ++ + F E + Sbjct: 14 TALNLQAHRQQLLASNIANADTPHYKARDIDFREALQGALG 54 >gi|218704490|ref|YP_002412009.1| flagellar hook-associated protein FlgK [Escherichia coli UMN026] gi|293404366|ref|ZP_06648360.1| flgK [Escherichia coli FVEC1412] gi|298380146|ref|ZP_06989751.1| flagellar hook-associated protein 1 [Escherichia coli FVEC1302] gi|300899601|ref|ZP_07117840.1| flagellar hook-associated protein FlgK [Escherichia coli MS 198-1] gi|218431587|emb|CAR12466.1| flagellar hook-filament junction protein 1 [Escherichia coli UMN026] gi|291428952|gb|EFF01977.1| flgK [Escherichia coli FVEC1412] gi|298279844|gb|EFI21352.1| flagellar hook-associated protein 1 [Escherichia coli FVEC1302] gi|300356872|gb|EFJ72742.1| flagellar hook-associated protein FlgK [Escherichia coli MS 198-1] Length = 547 Score = 40.6 bits (93), Expect = 0.19, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMTQANSTLGAGG 52 >gi|91210225|ref|YP_540211.1| flagellar basal body rod protein FlgB [Escherichia coli UTI89] gi|215486282|ref|YP_002328713.1| flagellar basal body rod protein FlgB [Escherichia coli O127:H6 str. E2348/69] gi|218557955|ref|YP_002390868.1| flagellar basal body rod protein FlgB [Escherichia coli S88] gi|237706941|ref|ZP_04537422.1| flagellar basal body rod protein FlgB [Escherichia sp. 3_2_53FAA] gi|312968853|ref|ZP_07783060.1| flagellar basal-body rod protein FlgB [Escherichia coli 2362-75] gi|331646331|ref|ZP_08347434.1| flagellar basal-body rod protein FlgB [Escherichia coli M605] gi|331657135|ref|ZP_08358097.1| flagellar basal-body rod protein FlgB [Escherichia coli TA206] gi|91071799|gb|ABE06680.1| cell-proximal portion of basal-body rod FlgB [Escherichia coli UTI89] gi|215264354|emb|CAS08711.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli O127:H6 str. E2348/69] gi|218364724|emb|CAR02414.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli S88] gi|222032826|emb|CAP75565.1| flagellar basal-body rod protein flgB [Escherichia coli LF82] gi|226898151|gb|EEH84410.1| flagellar basal body rod protein FlgB [Escherichia sp. 3_2_53FAA] gi|294489848|gb|ADE88604.1| flagellar basal-body rod protein FlgB [Escherichia coli IHE3034] gi|307627457|gb|ADN71761.1| flagellar basal body rod protein FlgB [Escherichia coli UM146] gi|312286255|gb|EFR14168.1| flagellar basal-body rod protein FlgB [Escherichia coli 2362-75] gi|312945635|gb|ADR26462.1| flagellar basal body rod protein FlgB [Escherichia coli O83:H1 str. NRG 857C] gi|315287372|gb|EFU46783.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 110-3] gi|320196445|gb|EFW71068.1| Flagellar basal-body rod protein FlgB [Escherichia coli WV_060327] gi|323190585|gb|EFZ75857.1| flagellar basal-body rod protein FlgB [Escherichia coli RN587/1] gi|323957897|gb|EGB53609.1| flagellar basal-body rod protein FlgB [Escherichia coli H263] gi|330910887|gb|EGH39397.1| flagellar basal-body rod protein FlgB [Escherichia coli AA86] gi|331045083|gb|EGI17210.1| flagellar basal-body rod protein FlgB [Escherichia coli M605] gi|331055383|gb|EGI27392.1| flagellar basal-body rod protein FlgB [Escherichia coli TA206] Length = 138 Score = 40.6 bits (93), Expect = 0.19, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 22/62 (35%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR +A N++N DT G++ + F+ + + S VA Sbjct: 15 ALNLRAQRQEVLAANIANADTPGYQARDIDFASELKKVMQRGRDATSVVALTMTSTKHIP 74 Query: 71 GS 72 Sbjct: 75 AQ 76 >gi|78067830|ref|YP_370599.1| flagellar hook-associated protein FlgK [Burkholderia sp. 383] gi|77968575|gb|ABB09955.1| conserved hypothetical protein [Burkholderia sp. 383] Length = 660 Score = 40.6 bits (93), Expect = 0.19, Method: Composition-based stats. Identities = 13/80 (16%), Positives = 26/80 (32%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 T N+G++ A L+T +N+SN T G+ + ++E Sbjct: 3 NTLMNLGVSGLNAALWGLTTTGNNISNAATPGYSVQRPVYAEASSQYSGSGYMPQGVNTV 62 Query: 62 GKEYLSKEVGSFISTGTELD 81 + + S + Sbjct: 63 TVQRQYSQYLSDQLNTAQTQ 82 Score = 34.8 bits (78), Expect = 10.0, Method: Composition-based stats. Identities = 4/37 (10%), Positives = 12/37 (32%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S ++ E ++ Q + + +I + Sbjct: 620 SGVSTNEEAANLMQYQQFYQANAKVIQTAATLFQTVL 656 >gi|301023269|ref|ZP_07187066.1| flagellar hook-associated protein FlgK [Escherichia coli MS 69-1] gi|300397114|gb|EFJ80652.1| flagellar hook-associated protein FlgK [Escherichia coli MS 69-1] Length = 547 Score = 40.6 bits (93), Expect = 0.19, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMTQANSTLGAGG 52 >gi|260772271|ref|ZP_05881187.1| flagellar basal-body rod protein FlgB [Vibrio metschnikovii CIP 69.14] gi|260611410|gb|EEX36613.1| flagellar basal-body rod protein FlgB [Vibrio metschnikovii CIP 69.14] Length = 131 Score = 40.6 bits (93), Expect = 0.19, Method: Composition-based stats. Identities = 7/37 (18%), Positives = 17/37 (45%) Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 + +A N++ ++T GF+ + F + A + Sbjct: 21 RNAEVIATNIAQSNTPGFKAKGMDFDRALKAASSGAS 57 >gi|229017031|ref|ZP_04173951.1| Flagellar basal-body rod protein [Bacillus cereus AH1273] gi|229023212|ref|ZP_04179723.1| Flagellar basal-body rod protein [Bacillus cereus AH1272] gi|228738137|gb|EEL88622.1| Flagellar basal-body rod protein [Bacillus cereus AH1272] gi|228744302|gb|EEL94384.1| Flagellar basal-body rod protein [Bacillus cereus AH1273] Length = 177 Score = 40.6 bits (93), Expect = 0.19, Method: Composition-based stats. Identities = 12/72 (16%), Positives = 29/72 (40%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 L + +TV+ N++N +T G++ V F+E + + + + S + Sbjct: 54 MNYLVTKRNTVSSNIANANTPGYKAQGVTFAEQMNMNNPLFKKNAADLKSNSDLYQTNEM 113 Query: 72 SFISTGTELDFA 83 + + +A Sbjct: 114 HLPTANMKNTYA 125 >gi|161526189|ref|YP_001581201.1| flagellar basal body rod protein FlgB [Burkholderia multivorans ATCC 17616] gi|189349095|ref|YP_001944723.1| flagellar basal body rod protein FlgB [Burkholderia multivorans ATCC 17616] gi|160343618|gb|ABX16704.1| flagellar basal-body rod protein FlgB [Burkholderia multivorans ATCC 17616] gi|189333117|dbj|BAG42187.1| flagellar basal-body rod protein [Burkholderia multivorans ATCC 17616] Length = 162 Score = 40.6 bits (93), Expect = 0.19, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 18/43 (41%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 A R ++ N++N DT G+R V F+ + + Sbjct: 15 ALDVRAYRQELLSSNIANADTPGYRARDVDFASTLAHSLKQAN 57 >gi|323139651|ref|ZP_08074693.1| flagellar basal body rod protein FlgB [Methylocystis sp. ATCC 49242] gi|322395083|gb|EFX97642.1| flagellar basal body rod protein FlgB [Methylocystis sp. ATCC 49242] Length = 126 Score = 40.6 bits (93), Expect = 0.19, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 1/67 (1%) Query: 15 LEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIKNDIDQKISFVASGKEYLSKEVGSF 73 L R S VA N++N+DT G+R V F+ V+ + ++ + + + Sbjct: 17 LSTRQSLVAQNIANSDTPGYRARDVMPFARVMESSALEMAGSNPLHMHPSQSEAYAAATK 76 Query: 74 ISTGTEL 80 + G E Sbjct: 77 PTDGWET 83 >gi|332525060|ref|ZP_08401240.1| flagellar hook-associated protein FlgK [Rubrivivax benzoatilyticus JA2] gi|332108349|gb|EGJ09573.1| flagellar hook-associated protein FlgK [Rubrivivax benzoatilyticus JA2] Length = 659 Score = 40.6 bits (93), Expect = 0.20, Method: Composition-based stats. Identities = 8/48 (16%), Positives = 18/48 (37%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 ++G+ A A + N+SN + G+ + + + G Sbjct: 1 MSLGMRAMTASYASMQVTGHNISNANVPGYSRQQAELATAKGQYTGAG 48 Score = 38.7 bits (88), Expect = 0.81, Method: Composition-based stats. Identities = 6/41 (14%), Positives = 15/41 (36%) Query: 200 EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 E S N E ++I Q + + ++ + ++ Sbjct: 616 EVSGVNLDEEAARLIQYQQSYQAAAKVLQVAQSVFETLLQT 656 >gi|218689026|ref|YP_002397238.1| flagellar basal body rod protein FlgB [Escherichia coli ED1a] gi|218426590|emb|CAR07418.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli ED1a] gi|324007913|gb|EGB77132.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 57-2] Length = 138 Score = 40.6 bits (93), Expect = 0.20, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 22/62 (35%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR +A N++N DT G++ + F+ + + S VA Sbjct: 15 ALNLRAQRQEVLAANIANADTPGYQARDIDFASELKKVMQRGRDATSVVALTMTSTKHIP 74 Query: 71 GS 72 Sbjct: 75 AQ 76 >gi|117623259|ref|YP_852172.1| flagellar basal body rod protein FlgB [Escherichia coli APEC O1] gi|115512383|gb|ABJ00458.1| cell-proximal portion of basal-body rod FlgB [Escherichia coli APEC O1] gi|323953241|gb|EGB49107.1| flagellar basal-body rod protein FlgB [Escherichia coli H252] Length = 138 Score = 40.6 bits (93), Expect = 0.20, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 22/62 (35%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR +A N++N DT G++ + F+ + + S VA Sbjct: 15 ALNLRAQRQEVLAANIANADTPGYQARDIDFASELKKVMQRGRDATSVVALTMTSTKHIP 74 Query: 71 GS 72 Sbjct: 75 AQ 76 >gi|323947625|gb|EGB43629.1| flagellar basal-body rod protein FlgB [Escherichia coli H120] Length = 138 Score = 40.6 bits (93), Expect = 0.20, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 22/62 (35%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR +A N++N DT G++ + F+ + + S VA Sbjct: 15 ALNLRAQRQEVLAANIANADTPGYQARDIDFASELKKVMQRGRDATSVVALTMTSTQHIP 74 Query: 71 GS 72 Sbjct: 75 AQ 76 >gi|218896676|ref|YP_002445087.1| flagellar basal-body rod protein FlgB [Bacillus cereus G9842] gi|218543629|gb|ACK96023.1| flagellar basal-body rod protein FlgB [Bacillus cereus G9842] Length = 135 Score = 40.6 bits (93), Expect = 0.20, Method: Composition-based stats. Identities = 12/72 (16%), Positives = 28/72 (38%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 L + +TV+ N++N +T G++ V F+E + + + S + Sbjct: 12 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNEM 71 Query: 72 SFISTGTELDFA 83 + + +A Sbjct: 72 HLPTVNMKNTYA 83 >gi|196045109|ref|ZP_03112342.1| flagellar basal-body rod protein FlgB [Bacillus cereus 03BB108] gi|218902858|ref|YP_002450692.1| flagellar basal-body rod protein FlgB [Bacillus cereus AH820] gi|228945346|ref|ZP_04107701.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|300117338|ref|ZP_07055128.1| flagellar basal body rod protein FlgB [Bacillus cereus SJ1] gi|301053280|ref|YP_003791491.1| flagellar basal body rod protein [Bacillus anthracis CI] gi|196024111|gb|EDX62785.1| flagellar basal-body rod protein FlgB [Bacillus cereus 03BB108] gi|218535408|gb|ACK87806.1| flagellar basal-body rod protein FlgB [Bacillus cereus AH820] gi|228814318|gb|EEM60584.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|298725173|gb|EFI65825.1| flagellar basal body rod protein FlgB [Bacillus cereus SJ1] gi|300375449|gb|ADK04353.1| flagellar basal body rod protein [Bacillus cereus biovar anthracis str. CI] Length = 135 Score = 40.6 bits (93), Expect = 0.20, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 29/72 (40%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 L + +TV+ N++N +T G++ V F+E + + + S + Sbjct: 12 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNEM 71 Query: 72 SFISTGTELDFA 83 + T+ +A Sbjct: 72 HLPTVNTKNTYA 83 >gi|148980304|ref|ZP_01815991.1| flagellar basal-body rod protein C [Vibrionales bacterium SWAT-3] gi|145961323|gb|EDK26633.1| flagellar basal-body rod protein C [Vibrionales bacterium SWAT-3] Length = 142 Score = 40.6 bits (93), Expect = 0.20, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 17/41 (41%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 G++ S N + EM MI T+ F + ++ + Sbjct: 96 GYVYYSGINVVNEMADMISATRSFEASVEVLGNVKSMQQSL 136 Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 15/96 (15%), Positives = 31/96 (32%), Gaps = 7/96 (7%) Query: 4 SFN-IGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56 +A A RL+T++ N++N D+V ++ +K FS V Q+ Sbjct: 5 GIYETAGSAMSAQTVRLNTISSNLANADSVSGDPSQVYKPLKPIFSAVYNHFNAQQTQQQ 64 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFAL 92 V + + + + + Sbjct: 65 GVVPIRIADVVEVSSMMEGRYEPNNPLSNDEGYVYY 100 >gi|119503641|ref|ZP_01625724.1| Flagellar basal-body rod protein FlgB [marine gamma proteobacterium HTCC2080] gi|119460703|gb|EAW41795.1| Flagellar basal-body rod protein FlgB [marine gamma proteobacterium HTCC2080] Length = 133 Score = 40.6 bits (93), Expect = 0.20, Method: Composition-based stats. Identities = 10/79 (12%), Positives = 26/79 (32%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + I QR++ ++ N++N +T ++ + F + N + Sbjct: 5 DNALGISPQVLALRSQRMNLLSANIANAETPNYKARDIDFRAAMTQASNSQESTQLRATQ 64 Query: 62 GKEYLSKEVGSFISTGTEL 80 K E + + + Sbjct: 65 AKHMTGFESQLGVESDIKY 83 >gi|27378814|ref|NP_770343.1| flagellar hook-associated protein [Bradyrhizobium japonicum USDA 110] gi|27351963|dbj|BAC48968.1| flaN [Bradyrhizobium japonicum USDA 110] Length = 582 Score = 40.6 bits (93), Expect = 0.20, Method: Composition-based stats. Identities = 9/28 (32%), Positives = 16/28 (57%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVGF 34 I + A + ++S + N+SN DT G+ Sbjct: 9 IAFSGLSATQVQISVTSSNISNADTTGY 36 >gi|283955071|ref|ZP_06372574.1| flagellar hook-associated protein FlgK, putative [Campylobacter jejuni subsp. jejuni 414] gi|283793438|gb|EFC32204.1| flagellar hook-associated protein FlgK, putative [Campylobacter jejuni subsp. jejuni 414] Length = 608 Score = 40.6 bits (93), Expect = 0.20, Method: Composition-based stats. Identities = 8/36 (22%), Positives = 18/36 (50%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 + G+ A E +++T +N+SN + + +V Sbjct: 7 LHTGVTGLKASEVQIATTGNNISNANATFYTRQRVV 42 Score = 37.5 bits (85), Expect = 1.8, Method: Composition-based stats. Identities = 5/48 (10%), Positives = 17/48 (35%) Query: 191 GVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 +V + S N+ E+ +I + + ++ + + + Sbjct: 557 YNSVYSEYQSKSGVNTNEELAALIQYQSSYGAAAKIVSTVNQMLDTLL 604 >gi|229155314|ref|ZP_04283425.1| Flagellar basal-body rod protein [Bacillus cereus ATCC 4342] gi|228628239|gb|EEK84955.1| Flagellar basal-body rod protein [Bacillus cereus ATCC 4342] Length = 135 Score = 40.6 bits (93), Expect = 0.20, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 20/34 (58%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV 45 L + +TV+ N++N +T G++ V F+E + Sbjct: 12 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQM 45 >gi|138894737|ref|YP_001125190.1| flagellar basal body rod protein FlgB [Geobacillus thermodenitrificans NG80-2] gi|134266250|gb|ABO66445.1| Flagellar basal-body rod protein [Geobacillus thermodenitrificans NG80-2] Length = 129 Score = 40.6 bits (93), Expect = 0.20, Method: Composition-based stats. Identities = 9/33 (27%), Positives = 15/33 (45%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 R +ADN++N DT G + ++F Sbjct: 14 GLRYASLRQQAIADNIANVDTPGCKAKDIRFQA 46 >gi|115523570|ref|YP_780481.1| flagellar basal body rod protein FlgB [Rhodopseudomonas palustris BisA53] gi|115517517|gb|ABJ05501.1| flagellar basal body rod protein [Rhodopseudomonas palustris BisA53] Length = 136 Score = 40.6 bits (93), Expect = 0.20, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 15/26 (57%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFR 35 ++R +ADN++N+DT F+ Sbjct: 14 TRMQWHQERQRVLADNIANSDTPAFK 39 >gi|30261742|ref|NP_844119.1| flagellar basal body rod protein FlgB [Bacillus anthracis str. Ames] gi|47526962|ref|YP_018311.1| flagellar basal body rod protein FlgB [Bacillus anthracis str. 'Ames Ancestor'] gi|49184572|ref|YP_027824.1| flagellar basal body rod protein FlgB [Bacillus anthracis str. Sterne] gi|65319011|ref|ZP_00391970.1| COG1815: Flagellar basal body protein [Bacillus anthracis str. A2012] gi|165869479|ref|ZP_02214138.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str. A0488] gi|167633168|ref|ZP_02391493.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str. A0442] gi|167639175|ref|ZP_02397448.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str. A0193] gi|170686191|ref|ZP_02877413.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str. A0465] gi|170706512|ref|ZP_02896972.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str. A0389] gi|177650628|ref|ZP_02933595.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str. A0174] gi|190566366|ref|ZP_03019284.1| flagellar basal-body rod protein FlgB [Bacillus anthracis Tsiankovskii-I] gi|227815499|ref|YP_002815508.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str. CDC 684] gi|229601762|ref|YP_002866142.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str. A0248] gi|254683232|ref|ZP_05147093.1| flagellar basal body rod protein FlgB [Bacillus anthracis str. CNEVA-9066] gi|254723820|ref|ZP_05185606.1| flagellar basal body rod protein FlgB [Bacillus anthracis str. A1055] gi|254734584|ref|ZP_05192296.1| flagellar basal body rod protein FlgB [Bacillus anthracis str. Western North America USA6153] gi|254740993|ref|ZP_05198681.1| flagellar basal body rod protein FlgB [Bacillus anthracis str. Kruger B] gi|254755236|ref|ZP_05207270.1| flagellar basal body rod protein FlgB [Bacillus anthracis str. Vollum] gi|254759772|ref|ZP_05211796.1| flagellar basal body rod protein FlgB [Bacillus anthracis str. Australia 94] gi|30255970|gb|AAP25605.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str. Ames] gi|47502110|gb|AAT30786.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str. 'Ames Ancestor'] gi|49178499|gb|AAT53875.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str. Sterne] gi|164714919|gb|EDR20437.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str. A0488] gi|167512965|gb|EDR88338.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str. A0193] gi|167531206|gb|EDR93884.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str. A0442] gi|170128610|gb|EDS97477.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str. A0389] gi|170669888|gb|EDT20629.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str. A0465] gi|172083772|gb|EDT68832.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str. A0174] gi|190562501|gb|EDV16468.1| flagellar basal-body rod protein FlgB [Bacillus anthracis Tsiankovskii-I] gi|227006070|gb|ACP15813.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str. CDC 684] gi|229266170|gb|ACQ47807.1| flagellar basal-body rod protein FlgB [Bacillus anthracis str. A0248] Length = 135 Score = 40.6 bits (93), Expect = 0.20, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 29/72 (40%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 L + +TV+ N++N +T G++ V F+E + + + S + Sbjct: 12 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNEM 71 Query: 72 SFISTGTELDFA 83 + T+ +A Sbjct: 72 HVPTVNTKNTYA 83 >gi|300696910|ref|YP_003747571.1| flagellar component of cell-proximal portion of basal-body rod, protein flgb [Ralstonia solanacearum CFBP2957] gi|299073634|emb|CBJ53154.1| flagellar component of cell-proximal portion of basal-body rod, protein flgb [Ralstonia solanacearum CFBP2957] Length = 153 Score = 40.6 bits (93), Expect = 0.20, Method: Composition-based stats. Identities = 17/121 (14%), Positives = 35/121 (28%), Gaps = 3/121 (2%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR +A N++N DT ++ F + + + Sbjct: 15 ALRLRSQRHQLLASNIANADTPSYKARDFDFQSALQKATGQQSGSSLPMTATAAGHLTAA 74 Query: 71 GSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVP 130 G+ + + +L + T + + DG+ V G+ +V Sbjct: 75 GAPAADVVPMQASLSAQSQADALQGEVEYRT---SQQPSIDGNTVDMDGERMRFADNTVR 131 Query: 131 I 131 Sbjct: 132 Y 132 >gi|188592123|ref|YP_001796721.1| flagellar hook-associated protein flgk [Cupriavidus taiwanensis LMG 19424] gi|170938497|emb|CAP63484.1| FlgK: Flagellar hook-associated protein 1 [Cupriavidus taiwanensis LMG 19424] Length = 639 Score = 40.6 bits (93), Expect = 0.20, Method: Composition-based stats. Identities = 11/51 (21%), Positives = 21/51 (41%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 + F+IGL+ + L+T N +N+ T G+ + G + Sbjct: 1 MSLFSIGLSGLNTAQNALTTTGHNFANSATEGYSRQNTIVASAGGQYTSQG 51 Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 7/37 (18%), Positives = 11/37 (29%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N E M+ Q + + +I I Sbjct: 599 SGVNMDEETVSMLRFQQLYQANARVIQTAGTLFDTII 635 >gi|228926779|ref|ZP_04089847.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228832892|gb|EEM78461.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 138 Score = 40.6 bits (93), Expect = 0.20, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 29/72 (40%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 L + +TV+ N++N +T G++ V F+E + + + S + Sbjct: 15 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNEM 74 Query: 72 SFISTGTELDFA 83 + T+ +A Sbjct: 75 HLPTVNTKNKYA 86 >gi|115523523|ref|YP_780434.1| flagellar hook-associated protein [Rhodopseudomonas palustris BisA53] gi|115517470|gb|ABJ05454.1| flagellar hook-associated protein FlgK [Rhodopseudomonas palustris BisA53] Length = 629 Score = 40.6 bits (93), Expect = 0.20, Method: Composition-based stats. Identities = 9/31 (29%), Positives = 19/31 (61%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGF 34 + +I +A A + +S V+ N++N +T G+ Sbjct: 6 ALSIAMAGLRANQASMSLVSSNVANAETPGY 36 Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats. Identities = 5/39 (12%), Positives = 14/39 (35%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S N EM ++ L +++ ++ ++ Sbjct: 589 QSGVNMDEEMAHLLALQNAYSANARVMSTVNDMYKTLMQ 627 >gi|323967014|gb|EGB62440.1| flagellar basal-body rod protein FlgB [Escherichia coli M863] gi|323976554|gb|EGB71642.1| flagellar basal-body rod protein FlgB [Escherichia coli TW10509] gi|327253472|gb|EGE65110.1| flagellar basal-body rod protein FlgB [Escherichia coli STEC_7v] Length = 138 Score = 40.6 bits (93), Expect = 0.20, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 23/62 (37%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR +A N++N DT G++ + F+ + + + S VA Sbjct: 15 ALNLRAQRQEVLAANIANADTPGYQARDIDFASELKKVMQRGRDETSMVALTMTSTQHIP 74 Query: 71 GS 72 Sbjct: 75 AQ 76 >gi|261344145|ref|ZP_05971789.1| flagellar basal-body rod protein FlgB [Providencia rustigianii DSM 4541] gi|282567738|gb|EFB73273.1| flagellar basal-body rod protein FlgB [Providencia rustigianii DSM 4541] Length = 137 Score = 40.6 bits (93), Expect = 0.20, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 25/65 (38%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A E R + +A N++N DT G++ + F+ + + K ++ Sbjct: 15 ALSIREARQTVLASNIANADTPGYQARDIDFNRQLQQAMDKGVVKGKGISLAVTAKGHIE 74 Query: 71 GSFIS 75 G + Sbjct: 75 GHDMQ 79 >gi|77918799|ref|YP_356614.1| flagellar basal-body rod protein FlgB [Pelobacter carbinolicus DSM 2380] gi|77544882|gb|ABA88444.1| flagellar basal-body rod protein FlgB [Pelobacter carbinolicus DSM 2380] Length = 141 Score = 40.6 bits (93), Expect = 0.20, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 21/52 (40%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLS 67 +Q+ +A N++N+ T G+ +++ F E + + + Sbjct: 22 QQKQELIASNIANSQTPGYIPVQLSFEEDLARALQNNQSAPGQPSDQPHPRH 73 >gi|1857439|gb|AAC45657.1| FlgB [Proteus mirabilis] Length = 139 Score = 40.6 bits (93), Expect = 0.20, Method: Composition-based stats. Identities = 10/66 (15%), Positives = 20/66 (30%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A +R +A N++N DT GF+ + F+ + + + Sbjct: 15 ALSLRNKRQEILAANIANADTPGFQARDIDFAAELKKTMENGRTGSHGLQLTMTSERHIP 74 Query: 71 GSFIST 76 Sbjct: 75 IKPGYR 80 >gi|56964037|ref|YP_175768.1| flagellar basal body rod protein FlgB [Bacillus clausii KSM-K16] gi|56910280|dbj|BAD64807.1| flagellar basal-body rod protein FlgB [Bacillus clausii KSM-K16] Length = 131 Score = 40.6 bits (93), Expect = 0.20, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 18/43 (41%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 + ++ N++N DT F+ V F +V+ A+ Sbjct: 13 GIRYSSTKQKAISTNLANVDTPNFKEKTVSFDQVLQAVGEKTG 55 >gi|78485815|ref|YP_391740.1| flagellar basal-body rod protein FlgB [Thiomicrospira crunogena XCL-2] gi|78364101|gb|ABB42066.1| Flagellar basal-body rod protein FlgB [Thiomicrospira crunogena XCL-2] Length = 133 Score = 40.6 bits (93), Expect = 0.21, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 38/95 (40%), Gaps = 7/95 (7%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M++ F I A ++R S +A+N++N DT F+ V + + + A + D+ + Sbjct: 1 MESVFGIHEHALAVRKERQSILANNIANADTPNFKARDVDWRKEMQAAEEDLSKGHYKPD 60 Query: 61 SGKEYLSKEVGSFISTG-------TELDFALEGDA 88 G ++ AL+G+ Sbjct: 61 LKMTNSRHIEGFAEASTEDYLKYRMPTQPALDGNT 95 >gi|315296704|gb|EFU55999.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 16-3] Length = 138 Score = 40.6 bits (93), Expect = 0.21, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 22/62 (35%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR +A N++N DT G++ + F+ + + S VA Sbjct: 15 ALNLRAQRQEVLAANIANADTPGYQARDIDFASELKKVMQRGRDATSVVALTMTSTQHIP 74 Query: 71 GS 72 Sbjct: 75 AQ 76 >gi|237731013|ref|ZP_04561494.1| flagellar hook-associated protein FlgK [Citrobacter sp. 30_2] gi|226906552|gb|EEH92470.1| flagellar hook-associated protein FlgK [Citrobacter sp. 30_2] Length = 552 Score = 40.6 bits (93), Expect = 0.21, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLSAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|157146220|ref|YP_001453539.1| flagellar hook-associated protein FlgK [Citrobacter koseri ATCC BAA-895] gi|157083425|gb|ABV13103.1| hypothetical protein CKO_01977 [Citrobacter koseri ATCC BAA-895] Length = 544 Score = 40.6 bits (93), Expect = 0.21, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLSAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|255026116|ref|ZP_05298102.1| flagellar hook-associated protein FlgK [Listeria monocytogenes FSL J2-003] Length = 198 Score = 40.6 bits (93), Expect = 0.21, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 18/42 (42%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46 FN L+ A + N+SN +T G+ V + V G Sbjct: 6 FNTSLSGMSAAQIANMVAQQNISNMNTPGYIRQAVDQTAVYG 47 >gi|206970568|ref|ZP_03231520.1| flagellar basal-body rod protein FlgB [Bacillus cereus AH1134] gi|218232483|ref|YP_002366428.1| flagellar basal body rod protein FlgB [Bacillus cereus B4264] gi|229069295|ref|ZP_04202585.1| Flagellar basal-body rod protein [Bacillus cereus F65185] gi|229078925|ref|ZP_04211477.1| Flagellar basal-body rod protein [Bacillus cereus Rock4-2] gi|206734204|gb|EDZ51374.1| flagellar basal-body rod protein FlgB [Bacillus cereus AH1134] gi|218160440|gb|ACK60432.1| flagellar basal-body rod protein FlgB [Bacillus cereus B4264] gi|228704339|gb|EEL56773.1| Flagellar basal-body rod protein [Bacillus cereus Rock4-2] gi|228713782|gb|EEL65667.1| Flagellar basal-body rod protein [Bacillus cereus F65185] Length = 135 Score = 40.6 bits (93), Expect = 0.21, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 29/72 (40%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 L + +TV+ N++N +T G++ V F+E + + + S + Sbjct: 12 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNEM 71 Query: 72 SFISTGTELDFA 83 + T+ +A Sbjct: 72 HLPTVNTKNTYA 83 >gi|30019788|ref|NP_831419.1| flagellar basal body rod protein FlgB [Bacillus cereus ATCC 14579] gi|49480943|ref|YP_035863.1| flagellar basal body rod protein FlgB [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52143715|ref|YP_083114.1| flagellar basal body rod protein FlgB [Bacillus cereus E33L] gi|196033492|ref|ZP_03100904.1| flagellar basal-body rod protein FlgB [Bacillus cereus W] gi|296502343|ref|YP_003664043.1| flagellar basal body rod protein FlgB [Bacillus thuringiensis BMB171] gi|29895333|gb|AAP08620.1| Flagellar basal-body rod protein flgB [Bacillus cereus ATCC 14579] gi|49332499|gb|AAT63145.1| flagellar basal-body rod protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51977184|gb|AAU18734.1| flagellar basal-body rod protein [Bacillus cereus E33L] gi|195993926|gb|EDX57882.1| flagellar basal-body rod protein FlgB [Bacillus cereus W] gi|296323395|gb|ADH06323.1| flagellar basal body rod protein FlgB [Bacillus thuringiensis BMB171] Length = 135 Score = 40.6 bits (93), Expect = 0.21, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 29/72 (40%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 L + +TV+ N++N +T G++ V F+E + + + S + Sbjct: 12 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNEM 71 Query: 72 SFISTGTELDFA 83 + T+ +A Sbjct: 72 HLPTVNTKNTYA 83 >gi|238028852|ref|YP_002913083.1| flagellar basal body rod protein FlgB [Burkholderia glumae BGR1] gi|237878046|gb|ACR30379.1| Flagellar basal-body rod protein FlgB [Burkholderia glumae BGR1] Length = 167 Score = 40.6 bits (93), Expect = 0.21, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 18/38 (47%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI 48 A R ++ N++N DT G++ V F+ +G Sbjct: 20 ALDVRAYRQELISSNIANADTPGYQARDVDFASALGRS 57 >gi|167464316|ref|ZP_02329405.1| flagellar hook-associated protein FlgK [Paenibacillus larvae subsp. larvae BRL-230010] Length = 519 Score = 40.6 bits (93), Expect = 0.21, Method: Composition-based stats. Identities = 14/124 (11%), Positives = 37/124 (29%), Gaps = 6/124 (4%) Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 ++ + ++ + + G S+ G +E + Sbjct: 399 DEKLISGNNTLAKLMAQLKDTKFTFSGAGRGITNSTINDFYGSLVGQLGVQSKEATRQYE 458 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 N ++ + T G +E EM +M+ FN+ + ++ + + I Sbjct: 459 NEGKLVVQADTRRTSVSGVVEL------EEMMEMVKYNHSFNAAARFMTTYDEILNKLIN 512 Query: 240 NIAS 243 + Sbjct: 513 GTGT 516 Score = 38.3 bits (87), Expect = 0.98, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 25/79 (31%), Gaps = 3/79 (3%) Query: 1 MQTSFN---IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS 57 M++SF + LA + L+ + N+SN G+ +V + + I Sbjct: 1 MRSSFFGFETAKRSMLASQNVLNIIGHNISNQHIPGYSRQRVNLNASMPIEYPGIGHTTI 60 Query: 58 FVASGKEYLSKEVGSFIST 76 G + Sbjct: 61 PGQMGTGVDMHSITRIRDR 79 >gi|326939357|gb|AEA15253.1| flagellar basal body rod protein FlgB [Bacillus thuringiensis serovar chinensis CT-43] Length = 135 Score = 40.2 bits (92), Expect = 0.22, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 29/72 (40%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 L + +TV+ N++N +T G++ V F+E + + + S + Sbjct: 12 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNEM 71 Query: 72 SFISTGTELDFA 83 + T+ +A Sbjct: 72 HLPTVNTKNTYA 83 >gi|299066533|emb|CBJ37723.1| putative Flagellar basal-body rod protein FlgC [Ralstonia solanacearum CMR15] Length = 157 Score = 40.2 bits (92), Expect = 0.22, Method: Composition-based stats. Identities = 8/69 (11%), Positives = 21/69 (30%), Gaps = 6/69 (8%) Query: 170 VRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDE 229 P P + G +G ++ EM ++ + + + ++ Sbjct: 89 EPTGAQPRMVYEPGHPFANDKGFVAYQG------VDTATEMVTLMSALRAYEANVVAMNT 142 Query: 230 NEKSMLEAI 238 L+A+ Sbjct: 143 ARTLSLKAL 151 Score = 39.1 bits (89), Expect = 0.55, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 15/34 (44%), Gaps = 2/34 (5%) Query: 1 MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTV 32 M +F I A R+ + N++N +TV Sbjct: 1 MDYARAFAISAAGMAVERTRVDVASLNLANANTV 34 >gi|116694225|ref|YP_728436.1| flagellar hook-associated protein FlgK [Ralstonia eutropha H16] gi|113528724|emb|CAJ95071.1| flagellar hook-associated protein 1 [Ralstonia eutropha H16] Length = 639 Score = 40.2 bits (92), Expect = 0.22, Method: Composition-based stats. Identities = 11/51 (21%), Positives = 21/51 (41%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 + F+IGL+ + L+T N +N+ T G+ + G + Sbjct: 1 MSLFSIGLSGLNTAQNALTTTGHNFANSATEGYSRQNTIVASAGGQYTSQG 51 Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 7/37 (18%), Positives = 11/37 (29%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N E M+ Q + + +I I Sbjct: 599 SGVNMDEETVSMLRFQQLYQANARVIQTAGTLFDTII 635 >gi|78776566|ref|YP_392881.1| flagellar basal body rod protein FlgB [Sulfurimonas denitrificans DSM 1251] gi|78497106|gb|ABB43646.1| Flagellar basal-body rod protein FlgB [Sulfurimonas denitrificans DSM 1251] Length = 143 Score = 40.2 bits (92), Expect = 0.22, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 27/93 (29%) Query: 8 GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLS 67 A R ++ N++N DT +R V+F + + K I S + S Sbjct: 12 AAKALDYRAIRQDMISSNIANADTPFYRPRDVRFEDTLAEQKAKILNLSIPKLSLAQTDS 71 Query: 68 KEVGSFISTGTELDFALEGDAWFALESPRGIIL 100 + D A + L Sbjct: 72 AHIPLKDEPDNSKAKTFFRDGHMARNDGNSVDL 104 >gi|119775453|ref|YP_928193.1| flagellar basal body rod protein FlgB [Shewanella amazonensis SB2B] gi|119767953|gb|ABM00524.1| flagellar basal-body rod protein FlgB [Shewanella amazonensis SB2B] Length = 132 Score = 40.2 bits (92), Expect = 0.22, Method: Composition-based stats. Identities = 9/57 (15%), Positives = 23/57 (40%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFI 74 R ++ N++N DT ++ V F++ + A ++ S + + + Sbjct: 22 RAEVLSSNIANADTPHYKARDVNFADALQAARSQQRGMQMAQTSEGHFDLQALSRQH 78 >gi|315452788|ref|YP_004073058.1| putative flagellar basal-body rod protein [Helicobacter felis ATCC 49179] gi|315131840|emb|CBY82468.1| putative flagellar basal-body rod protein [Helicobacter felis ATCC 49179] Length = 140 Score = 40.2 bits (92), Expect = 0.22, Method: Composition-based stats. Identities = 10/45 (22%), Positives = 19/45 (42%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK 55 A R +A N++N DT +R + F ++ K ++ Sbjct: 13 AMDYRALRQDLIASNIANVDTPFYRPKDLDFETMLAHKKAEVFDH 57 >gi|281178182|dbj|BAI54512.1| flagellar basal-body rod protein FlgB [Escherichia coli SE15] Length = 138 Score = 40.2 bits (92), Expect = 0.22, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 22/62 (35%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR +A N++N DT G++ + F+ + + S VA Sbjct: 15 ALNLRAQRQEVLAANIANADTPGYQARDIDFASELKKVMQRGRDATSVVALTMTSTQHIP 74 Query: 71 GS 72 Sbjct: 75 AQ 76 >gi|253773903|ref|YP_003036734.1| flagellar basal body rod protein FlgB [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254161179|ref|YP_003044287.1| flagellar basal body rod protein FlgB [Escherichia coli B str. REL606] gi|297516832|ref|ZP_06935218.1| flagellar basal body rod protein FlgB [Escherichia coli OP50] gi|242376877|emb|CAQ31594.1| flagellar basal-body rod protein FlgB, subunit of Flagellar Motor Complex and Flagellum [Escherichia coli BL21(DE3)] gi|253324947|gb|ACT29549.1| flagellar basal-body rod protein FlgB [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253973080|gb|ACT38751.1| flagellar basal-body rod protein B [Escherichia coli B str. REL606] gi|253977294|gb|ACT42964.1| flagellar basal-body rod protein B [Escherichia coli BL21(DE3)] Length = 138 Score = 40.2 bits (92), Expect = 0.22, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 22/62 (35%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR +A N++N DT G++ + F+ + + S VA Sbjct: 15 ALNLRAQRQEVLAANIANADTPGYQARDIDFASELKKVIQRGRDATSVVALTMTSTQHIP 74 Query: 71 GS 72 Sbjct: 75 AQ 76 >gi|254470270|ref|ZP_05083674.1| flagellar basal-body rod protein FlgB [Pseudovibrio sp. JE062] gi|211960581|gb|EEA95777.1| flagellar basal-body rod protein FlgB [Pseudovibrio sp. JE062] Length = 127 Score = 40.2 bits (92), Expect = 0.22, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIK---VKFSEVVGAIKNDIDQKISFVASGKEY 65 +QR +A+N++N DT G+R+ + FS++V A + + ++G Sbjct: 9 MQWHQQRQGVLAENVANADTPGYRSKDLKELSFSDMVDAEQGTGALRPVVTSAGHIT 65 >gi|196039148|ref|ZP_03106455.1| flagellar basal-body rod protein FlgB [Bacillus cereus NVH0597-99] gi|196030293|gb|EDX68893.1| flagellar basal-body rod protein FlgB [Bacillus cereus NVH0597-99] Length = 135 Score = 40.2 bits (92), Expect = 0.22, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 20/34 (58%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV 45 L + +TV+ N++N +T G++ V F+E + Sbjct: 12 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQM 45 >gi|333004892|gb|EGK24412.1| flagellar hook-associated protein 1 domain protein [Shigella flexneri VA-6] Length = 274 Score = 40.2 bits (92), Expect = 0.22, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|228914322|ref|ZP_04077937.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228845316|gb|EEM90352.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 138 Score = 40.2 bits (92), Expect = 0.22, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 29/72 (40%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 L + +TV+ N++N +T G++ V F+E + + + S + Sbjct: 15 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNEM 74 Query: 72 SFISTGTELDFA 83 + T+ +A Sbjct: 75 HLPTVNTKNTYA 86 >gi|187478182|ref|YP_786206.1| flagellar basal body rod protein FlgB [Bordetella avium 197N] gi|115422768|emb|CAJ49296.1| flagellar basal-body rod protein [Bordetella avium 197N] Length = 135 Score = 40.2 bits (92), Expect = 0.22, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 22/69 (31%) Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76 QR ++ N++N DT ++ F + + Q + S Sbjct: 21 QRQEVLSSNIANADTPNYKARDFDFKTAMQNALDGRMQLPDTQLHLTSARHIPAKAVSSG 80 Query: 77 GTELDFALE 85 EL + L Sbjct: 81 PAELQYRLP 89 >gi|260437430|ref|ZP_05791246.1| flagellar hook-associated protein FlgK [Butyrivibrio crossotus DSM 2876] gi|292810062|gb|EFF69267.1| flagellar hook-associated protein FlgK [Butyrivibrio crossotus DSM 2876] Length = 543 Score = 40.2 bits (92), Expect = 0.22, Method: Composition-based stats. Identities = 13/81 (16%), Positives = 25/81 (30%), Gaps = 4/81 (4%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV----VGAIKNDIDQKISFV 59 IG + A ++T A N+SN +T G+ V + + + Sbjct: 7 GLTIGSSGLFASNAAINTTAHNISNINTKGYTKQVSNQQAAESIRVYQSYGTVGTGTAVI 66 Query: 60 ASGKEYLSKEVGSFISTGTEL 80 + + S + T Sbjct: 67 SIDQLRSSYYDTKYRHANTNC 87 >gi|268589985|ref|ZP_06124206.1| flagellar basal-body rod protein FlgB [Providencia rettgeri DSM 1131] gi|291314704|gb|EFE55157.1| flagellar basal-body rod protein FlgB [Providencia rettgeri DSM 1131] Length = 137 Score = 40.2 bits (92), Expect = 0.22, Method: Composition-based stats. Identities = 12/62 (19%), Positives = 22/62 (35%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A E R + +A N++N DT G++ + F+ + + V Sbjct: 15 ALSIREARQTVLASNIANADTPGYQARDIDFNRQLQQAMDKGVVGGKGVTLAVTSKGHIE 74 Query: 71 GS 72 G Sbjct: 75 GR 76 >gi|148380623|ref|YP_001255164.1| flagellar basal-body rod protein FlgB [Clostridium botulinum A str. ATCC 3502] gi|153932093|ref|YP_001384909.1| flagellar basal body rod protein FlgB [Clostridium botulinum A str. ATCC 19397] gi|153937135|ref|YP_001388378.1| flagellar basal body rod protein FlgB [Clostridium botulinum A str. Hall] gi|153941113|ref|YP_001391965.1| flagellar basal body rod protein FlgB [Clostridium botulinum F str. Langeland] gi|168183266|ref|ZP_02617930.1| flagellar basal-body rod protein FlgB [Clostridium botulinum Bf] gi|170757776|ref|YP_001782282.1| flagellar basal body rod protein FlgB [Clostridium botulinum B1 str. Okra] gi|226950078|ref|YP_002805169.1| flagellar basal-body rod protein FlgB [Clostridium botulinum A2 str. Kyoto] gi|237796105|ref|YP_002863657.1| flagellar basal-body rod protein FlgB [Clostridium botulinum Ba4 str. 657] gi|148290107|emb|CAL84226.1| flagellar basal-body rod protein [Clostridium botulinum A str. ATCC 3502] gi|152928137|gb|ABS33637.1| flagellar basal-body rod protein FlgB [Clostridium botulinum A str. ATCC 19397] gi|152933049|gb|ABS38548.1| flagellar basal-body rod protein FlgB [Clostridium botulinum A str. Hall] gi|152937009|gb|ABS42507.1| flagellar basal-body rod protein FlgB [Clostridium botulinum F str. Langeland] gi|169122988|gb|ACA46824.1| flagellar basal-body rod protein FlgB [Clostridium botulinum B1 str. Okra] gi|182673652|gb|EDT85613.1| flagellar basal-body rod protein FlgB [Clostridium botulinum Bf] gi|226842504|gb|ACO85170.1| flagellar basal-body rod protein FlgB [Clostridium botulinum A2 str. Kyoto] gi|229262300|gb|ACQ53333.1| flagellar basal-body rod protein FlgB [Clostridium botulinum Ba4 str. 657] gi|295319982|gb|ADG00360.1| flagellar basal-body rod protein FlgB [Clostridium botulinum F str. 230613] Length = 133 Score = 40.2 bits (92), Expect = 0.22, Method: Composition-based stats. Identities = 11/58 (18%), Positives = 27/58 (46%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSK 68 + A R +++N++N +T ++ V F E + N+I+ K++ + + Sbjct: 19 SMNASSYRGKVISNNIANYNTPDYKRHYVTFEETLKDNLNNINMKVTAEKHMNDGVEF 76 >gi|261253608|ref|ZP_05946181.1| flagellar hook-associated protein FlgK [Vibrio orientalis CIP 102891] gi|260936999|gb|EEX92988.1| flagellar hook-associated protein FlgK [Vibrio orientalis CIP 102891] Length = 624 Score = 40.2 bits (92), Expect = 0.22, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 29/79 (36%), Gaps = 1/79 (1%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE-VVGAIKNDIDQKISFVASGK 63 N+G + L +++L+T N+SN +T G+ V + + V + Sbjct: 6 LNLGAQSVLTAQRQLNTTGHNISNVNTEGYSRQSVIQGTNMPRQYGGETYGMGVHVDKVR 65 Query: 64 EYLSKEVGSFISTGTELDF 82 + + ++ T Sbjct: 66 RSWDQFAVNELNVSTTSHA 84 Score = 35.2 bits (79), Expect = 8.4, Method: Composition-based stats. Identities = 4/35 (11%), Positives = 12/35 (34%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 N E M+ Q + + + ++ + + Sbjct: 587 VNLDEEAANMMKFQQAYMASSRIMQAANDTFNTIL 621 >gi|16129036|ref|NP_415591.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli str. K-12 substr. MG1655] gi|24112484|ref|NP_706994.1| flagellar basal body rod protein FlgB [Shigella flexneri 2a str. 301] gi|26247213|ref|NP_753253.1| flagellar basal body rod protein FlgB [Escherichia coli CFT073] gi|30062611|ref|NP_836782.1| flagellar basal body rod protein FlgB [Shigella flexneri 2a str. 2457T] gi|74311635|ref|YP_310054.1| flagellar basal body rod protein FlgB [Shigella sonnei Ss046] gi|89107919|ref|AP_001699.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli str. K-12 substr. W3110] gi|110641249|ref|YP_668979.1| flagellar basal body rod protein FlgB [Escherichia coli 536] gi|110805091|ref|YP_688611.1| flagellar basal body rod protein FlgB [Shigella flexneri 5 str. 8401] gi|157157889|ref|YP_001462307.1| flagellar basal body rod protein FlgB [Escherichia coli E24377A] gi|157160600|ref|YP_001457918.1| flagellar basal body rod protein FlgB [Escherichia coli HS] gi|170020531|ref|YP_001725485.1| flagellar basal body rod protein FlgB [Escherichia coli ATCC 8739] gi|170080724|ref|YP_001730044.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli str. K-12 substr. DH10B] gi|170683265|ref|YP_001744107.1| flagellar basal body rod protein FlgB [Escherichia coli SMS-3-5] gi|187732438|ref|YP_001880755.1| flagellar basal body rod protein FlgB [Shigella boydii CDC 3083-94] gi|191168464|ref|ZP_03030252.1| flagellar basal-body rod protein FlgB [Escherichia coli B7A] gi|191172447|ref|ZP_03033988.1| flagellar basal-body rod protein FlgB [Escherichia coli F11] gi|193064567|ref|ZP_03045647.1| flagellar basal-body rod protein FlgB [Escherichia coli E22] gi|193069459|ref|ZP_03050413.1| flagellar basal-body rod protein FlgB [Escherichia coli E110019] gi|194428410|ref|ZP_03060950.1| flagellar basal-body rod protein FlgB [Escherichia coli B171] gi|194438104|ref|ZP_03070197.1| flagellar basal-body rod protein FlgB [Escherichia coli 101-1] gi|209918327|ref|YP_002292411.1| flagellar basal body rod protein FlgB [Escherichia coli SE11] gi|218553652|ref|YP_002386565.1| flagellar basal body rod protein FlgB [Escherichia coli IAI1] gi|218694607|ref|YP_002402274.1| flagellar basal body rod protein FlgB [Escherichia coli 55989] gi|218700424|ref|YP_002408053.1| flagellar basal body rod protein FlgB [Escherichia coli IAI39] gi|218704481|ref|YP_002412000.1| flagellar basal body rod protein FlgB [Escherichia coli UMN026] gi|227886569|ref|ZP_04004374.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli 83972] gi|238900327|ref|YP_002926123.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli BW2952] gi|256018670|ref|ZP_05432535.1| flagellar basal body rod protein FlgB [Shigella sp. D9] gi|256023229|ref|ZP_05437094.1| flagellar basal body rod protein FlgB [Escherichia sp. 4_1_40B] gi|260843313|ref|YP_003221091.1| flagellar component FlgB of cell-proximal portion of basal-body rod [Escherichia coli O103:H2 str. 12009] gi|260854556|ref|YP_003228447.1| flagellar component FlgB of cell-proximal portion of basal-body rod [Escherichia coli O26:H11 str. 11368] gi|260867436|ref|YP_003233838.1| flagellar component FlgB of cell-proximal portion of basal-body rod [Escherichia coli O111:H- str. 11128] gi|293404357|ref|ZP_06648351.1| flgB [Escherichia coli FVEC1412] gi|293409439|ref|ZP_06653015.1| flagellar basal-body rod protein FlgB [Escherichia coli B354] gi|293414368|ref|ZP_06657017.1| flagellar basal-body rod protein FlgB [Escherichia coli B185] gi|293433363|ref|ZP_06661791.1| flagellar basal-body rod protein FlgB [Escherichia coli B088] gi|298380137|ref|ZP_06989742.1| flagellar basal-body rod protein FlgB [Escherichia coli FVEC1302] gi|300816775|ref|ZP_07096995.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 107-1] gi|300821146|ref|ZP_07101295.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 119-7] gi|300899592|ref|ZP_07117831.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 198-1] gi|300902464|ref|ZP_07120446.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 84-1] gi|300918675|ref|ZP_07135256.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 115-1] gi|300922599|ref|ZP_07138699.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 182-1] gi|300928375|ref|ZP_07143909.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 187-1] gi|300950168|ref|ZP_07164113.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 116-1] gi|300954387|ref|ZP_07166841.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 175-1] gi|300974377|ref|ZP_07172589.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 45-1] gi|300982624|ref|ZP_07176208.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 200-1] gi|301023260|ref|ZP_07187057.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 69-1] gi|301029712|ref|ZP_07192766.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 196-1] gi|301051143|ref|ZP_07197973.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 185-1] gi|301304988|ref|ZP_07211090.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 124-1] gi|301328557|ref|ZP_07221618.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 78-1] gi|301644985|ref|ZP_07244951.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 146-1] gi|306814078|ref|ZP_07448251.1| flagellar basal body rod protein FlgB [Escherichia coli NC101] gi|307137708|ref|ZP_07497064.1| flagellar basal body rod protein FlgB [Escherichia coli H736] gi|307310149|ref|ZP_07589799.1| flagellar basal-body rod protein FlgB [Escherichia coli W] gi|309798067|ref|ZP_07692442.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 145-7] gi|312971210|ref|ZP_07785388.1| flagellar basal-body rod protein FlgB [Escherichia coli 1827-70] gi|331641617|ref|ZP_08342752.1| flagellar basal-body rod protein FlgB [Escherichia coli H736] gi|331652126|ref|ZP_08353145.1| flagellar basal-body rod protein FlgB [Escherichia coli M718] gi|331662479|ref|ZP_08363402.1| flagellar basal-body rod protein FlgB [Escherichia coli TA143] gi|331667473|ref|ZP_08368337.1| flagellar basal-body rod protein FlgB [Escherichia coli TA271] gi|331672593|ref|ZP_08373382.1| flagellar basal-body rod protein FlgB [Escherichia coli TA280] gi|331676864|ref|ZP_08377560.1| flagellar basal-body rod protein FlgB [Escherichia coli H591] gi|331682575|ref|ZP_08383194.1| flagellar basal-body rod protein FlgB [Escherichia coli H299] gi|332279739|ref|ZP_08392152.1| flagellar component of cell-proximal portion of basal-body rod [Shigella sp. D9] gi|78100008|sp|P0ABX0|FLGB_ECOL6 RecName: Full=Flagellar basal-body rod protein flgB; AltName: Full=Putative proximal rod protein gi|78100009|sp|P0ABW9|FLGB_ECOLI RecName: Full=Flagellar basal-body rod protein flgB; AltName: Full=Putative proximal rod protein gi|78100010|sp|P0ABX1|FLGB_SHIFL RecName: Full=Flagellar basal-body rod protein flgB; AltName: Full=Putative proximal rod protein gi|26107614|gb|AAN79813.1|AE016759_87 Flagellar basal-body rod protein flgB [Escherichia coli CFT073] gi|1787313|gb|AAC74157.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli str. K-12 substr. MG1655] gi|4062650|dbj|BAA35881.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli str. K12 substr. W3110] gi|24051370|gb|AAN42701.1| flagellar basal-body rod protein FlgB (proximal rod protein) [Shigella flexneri 2a str. 301] gi|30040857|gb|AAP16588.1| flagellar basal-body rod protein FlgB (proximal rod protein) [Shigella flexneri 2a str. 2457T] gi|73855112|gb|AAZ87819.1| flagellar protein for cell-proximal portion of basal-body rod [Shigella sonnei Ss046] gi|110342841|gb|ABG69078.1| flagellar basal-body rod protein FlgB [Escherichia coli 536] gi|110614639|gb|ABF03306.1| Flagellar basal body protein [Shigella flexneri 5 str. 8401] gi|157066280|gb|ABV05535.1| flagellar basal-body rod protein FlgB [Escherichia coli HS] gi|157079919|gb|ABV19627.1| flagellar basal-body rod protein FlgB [Escherichia coli E24377A] gi|169755459|gb|ACA78158.1| flagellar basal-body rod protein FlgB [Escherichia coli ATCC 8739] gi|169888559|gb|ACB02266.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli str. K-12 substr. DH10B] gi|170520983|gb|ACB19161.1| flagellar basal-body rod protein FlgB [Escherichia coli SMS-3-5] gi|187429430|gb|ACD08704.1| flagellar basal-body rod protein FlgB [Shigella boydii CDC 3083-94] gi|190901483|gb|EDV61244.1| flagellar basal-body rod protein FlgB [Escherichia coli B7A] gi|190907331|gb|EDV66929.1| flagellar basal-body rod protein FlgB [Escherichia coli F11] gi|192927819|gb|EDV82433.1| flagellar basal-body rod protein FlgB [Escherichia coli E22] gi|192957207|gb|EDV87656.1| flagellar basal-body rod protein FlgB [Escherichia coli E110019] gi|194413462|gb|EDX29744.1| flagellar basal-body rod protein FlgB [Escherichia coli B171] gi|194423040|gb|EDX39034.1| flagellar basal-body rod protein FlgB [Escherichia coli 101-1] gi|209911586|dbj|BAG76660.1| flagellar basal-body rod protein FlgB [Escherichia coli SE11] gi|218351339|emb|CAU97045.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli 55989] gi|218360420|emb|CAQ97972.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli IAI1] gi|218370410|emb|CAR18217.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli IAI39] gi|218431578|emb|CAR12457.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli UMN026] gi|227836773|gb|EEJ47239.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli 83972] gi|238861101|gb|ACR63099.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli BW2952] gi|257753205|dbj|BAI24707.1| flagellar component FlgB of cell-proximal portion of basal-body rod [Escherichia coli O26:H11 str. 11368] gi|257758460|dbj|BAI29957.1| flagellar component FlgB of cell-proximal portion of basal-body rod [Escherichia coli O103:H2 str. 12009] gi|257763792|dbj|BAI35287.1| flagellar component FlgB of cell-proximal portion of basal-body rod [Escherichia coli O111:H- str. 11128] gi|260449787|gb|ACX40209.1| flagellar basal-body rod protein FlgB [Escherichia coli DH1] gi|281600493|gb|ADA73477.1| Flagellar basal-body rod protein flgB [Shigella flexneri 2002017] gi|284920896|emb|CBG33959.1| flagellar basal-body rod protein FlgB [Escherichia coli 042] gi|291324182|gb|EFE63604.1| flagellar basal-body rod protein FlgB [Escherichia coli B088] gi|291428943|gb|EFF01968.1| flgB [Escherichia coli FVEC1412] gi|291434426|gb|EFF07399.1| flagellar basal-body rod protein FlgB [Escherichia coli B185] gi|291469907|gb|EFF12391.1| flagellar basal-body rod protein FlgB [Escherichia coli B354] gi|298279835|gb|EFI21343.1| flagellar basal-body rod protein FlgB [Escherichia coli FVEC1302] gi|299877400|gb|EFI85611.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 196-1] gi|300297164|gb|EFJ53549.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 185-1] gi|300307089|gb|EFJ61609.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 200-1] gi|300318623|gb|EFJ68407.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 175-1] gi|300356863|gb|EFJ72733.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 198-1] gi|300397105|gb|EFJ80643.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 69-1] gi|300405496|gb|EFJ89034.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 84-1] gi|300410620|gb|EFJ94158.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 45-1] gi|300414169|gb|EFJ97479.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 115-1] gi|300421076|gb|EFK04387.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 182-1] gi|300450515|gb|EFK14135.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 116-1] gi|300463633|gb|EFK27126.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 187-1] gi|300526445|gb|EFK47514.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 119-7] gi|300530549|gb|EFK51611.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 107-1] gi|300839706|gb|EFK67466.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 124-1] gi|300844949|gb|EFK72709.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 78-1] gi|301076714|gb|EFK91520.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 146-1] gi|305852715|gb|EFM53163.1| flagellar basal body rod protein FlgB [Escherichia coli NC101] gi|306909867|gb|EFN40361.1| flagellar basal-body rod protein FlgB [Escherichia coli W] gi|307553075|gb|ADN45850.1| flagellar basal-body rod protein FlgB [Escherichia coli ABU 83972] gi|308118350|gb|EFO55612.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 145-7] gi|309701345|emb|CBJ00646.1| flagellar basal-body rod protein FlgB [Escherichia coli ETEC H10407] gi|310336412|gb|EFQ01598.1| flagellar basal-body rod protein FlgB [Escherichia coli 1827-70] gi|313650477|gb|EFS14884.1| flagellar basal-body rod protein FlgB [Shigella flexneri 2a str. 2457T] gi|315060351|gb|ADT74678.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli W] gi|315135705|dbj|BAJ42864.1| flgB [Escherichia coli DH1] gi|315253874|gb|EFU33842.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 85-1] gi|315291067|gb|EFU50430.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 153-1] gi|315618243|gb|EFU98833.1| flagellar basal-body rod protein FlgB [Escherichia coli 3431] gi|320173526|gb|EFW48722.1| Flagellar basal-body rod protein FlgB [Shigella dysenteriae CDC 74-1112] gi|320200969|gb|EFW75553.1| Flagellar basal-body rod protein FlgB [Escherichia coli EC4100B] gi|323156880|gb|EFZ43014.1| flagellar basal-body rod protein FlgB [Escherichia coli EPECa14] gi|323163755|gb|EFZ49574.1| flagellar basal-body rod protein FlgB [Escherichia coli E128010] gi|323165581|gb|EFZ51368.1| flagellar basal-body rod protein FlgB [Shigella sonnei 53G] gi|323174798|gb|EFZ60413.1| flagellar basal-body rod protein FlgB [Escherichia coli LT-68] gi|323175696|gb|EFZ61290.1| flagellar basal-body rod protein FlgB [Escherichia coli 1180] gi|323185804|gb|EFZ71165.1| flagellar basal-body rod protein FlgB [Escherichia coli 1357] gi|323379088|gb|ADX51356.1| flagellar basal-body rod protein FlgB [Escherichia coli KO11] gi|323937813|gb|EGB34077.1| flagellar basal-body rod protein FlgB [Escherichia coli E1520] gi|323942542|gb|EGB38709.1| flagellar basal-body rod protein FlgB [Escherichia coli E482] gi|323962672|gb|EGB58250.1| flagellar basal-body rod protein FlgB [Escherichia coli H489] gi|323973338|gb|EGB68527.1| flagellar basal-body rod protein FlgB [Escherichia coli TA007] gi|324013347|gb|EGB82566.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 60-1] gi|324017423|gb|EGB86642.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 117-3] gi|324117356|gb|EGC11263.1| flagellar basal-body rod protein FlgB [Escherichia coli E1167] gi|331038415|gb|EGI10635.1| flagellar basal-body rod protein FlgB [Escherichia coli H736] gi|331050404|gb|EGI22462.1| flagellar basal-body rod protein FlgB [Escherichia coli M718] gi|331060901|gb|EGI32865.1| flagellar basal-body rod protein FlgB [Escherichia coli TA143] gi|331065058|gb|EGI36953.1| flagellar basal-body rod protein FlgB [Escherichia coli TA271] gi|331070236|gb|EGI41602.1| flagellar basal-body rod protein FlgB [Escherichia coli TA280] gi|331075553|gb|EGI46851.1| flagellar basal-body rod protein FlgB [Escherichia coli H591] gi|331080206|gb|EGI51385.1| flagellar basal-body rod protein FlgB [Escherichia coli H299] gi|332102091|gb|EGJ05437.1| flagellar component of cell-proximal portion of basal-body rod [Shigella sp. D9] gi|332342619|gb|AEE55953.1| flagellar basal-body rod protein FlgB [Escherichia coli UMNK88] gi|332758231|gb|EGJ88554.1| flagellar basal-body rod protein FlgB [Shigella flexneri 4343-70] gi|332759615|gb|EGJ89920.1| flagellar basal-body rod protein FlgB [Shigella flexneri 2747-71] gi|332761417|gb|EGJ91701.1| flagellar basal-body rod protein FlgB [Shigella flexneri K-671] gi|332767679|gb|EGJ97872.1| flagellar basal-body rod protein FlgB [Shigella flexneri 2930-71] gi|333005507|gb|EGK25025.1| flagellar basal-body rod protein FlgB [Shigella flexneri K-218] gi|333008274|gb|EGK27748.1| flagellar basal-body rod protein FlgB [Shigella flexneri K-272] gi|333019331|gb|EGK38614.1| flagellar basal-body rod protein FlgB [Shigella flexneri K-304] gi|333019764|gb|EGK39036.1| flagellar basal-body rod protein FlgB [Shigella flexneri K-227] Length = 138 Score = 40.2 bits (92), Expect = 0.22, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 22/62 (35%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR +A N++N DT G++ + F+ + + S VA Sbjct: 15 ALNLRAQRQEVLAANIANADTPGYQARDIDFASELKKVMQRGRDATSVVALTMTSTQHIP 74 Query: 71 GS 72 Sbjct: 75 AQ 76 >gi|260774935|ref|ZP_05883836.1| flagellar basal-body rod protein FlgB [Vibrio coralliilyticus ATCC BAA-450] gi|260609190|gb|EEX35348.1| flagellar basal-body rod protein FlgB [Vibrio coralliilyticus ATCC BAA-450] Length = 132 Score = 40.2 bits (92), Expect = 0.23, Method: Composition-based stats. Identities = 6/38 (15%), Positives = 19/38 (50%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 E+ ++ N++ +T G+++ + F + + A + Sbjct: 20 ERNAEVISTNIAQANTPGYKSKGMDFQKALQAATSGAS 57 >gi|160896082|ref|YP_001561664.1| flagellar basal-body rod protein FlgB [Delftia acidovorans SPH-1] gi|160361666|gb|ABX33279.1| flagellar basal-body rod protein FlgB [Delftia acidovorans SPH-1] Length = 160 Score = 40.2 bits (92), Expect = 0.23, Method: Composition-based stats. Identities = 12/66 (18%), Positives = 25/66 (37%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A + +R +A N++N DT G+ F E + A+ + S ++ Sbjct: 38 ALVLRAERQRAIASNIANADTPGYVARDFNFREALTAVTSGPSPMTLASVSQGGHIPLPA 97 Query: 71 GSFIST 76 + + Sbjct: 98 AASGQS 103 >gi|313650466|gb|EFS14873.1| flagellar hook-associated 1 domain protein [Shigella flexneri 2a str. 2457T] gi|332758242|gb|EGJ88565.1| flagellar hook-associated protein 1 domain protein [Shigella flexneri 4343-70] gi|332759634|gb|EGJ89939.1| flagellar hook-associated protein 1 domain protein [Shigella flexneri 2747-71] gi|332761428|gb|EGJ91712.1| flagellar hook-associated protein 1 domain protein [Shigella flexneri K-671] gi|332767690|gb|EGJ97883.1| flagella basal body rod family protein [Shigella flexneri 2930-71] gi|333005757|gb|EGK25275.1| flagellar hook-associated protein 1 domain protein [Shigella flexneri K-218] gi|333008286|gb|EGK27760.1| flagellar hook-associated protein 1 domain protein [Shigella flexneri K-272] gi|333019422|gb|EGK38705.1| flagellar hook-associated protein 1 domain protein [Shigella flexneri K-304] gi|333019776|gb|EGK39048.1| flagellar hook-associated protein 1 domain protein [Shigella flexneri K-227] Length = 274 Score = 40.2 bits (92), Expect = 0.23, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|311105932|ref|YP_003978785.1| flagellar basal-body rod protein FlgB [Achromobacter xylosoxidans A8] gi|310760621|gb|ADP16070.1| flagellar basal-body rod protein FlgB [Achromobacter xylosoxidans A8] Length = 135 Score = 40.2 bits (92), Expect = 0.23, Method: Composition-based stats. Identities = 7/57 (12%), Positives = 16/57 (28%), Gaps = 2/57 (3%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLS 67 A R ++ N++N DT ++ F + + + Sbjct: 17 GLRAQ--RQEVLSSNIANADTPNYKARDFDFKTAMANAMEGTKRLPDTSLTLTSARH 71 >gi|163738065|ref|ZP_02145481.1| flagellar basal-body rod protein; FlgB [Phaeobacter gallaeciensis BS107] gi|163742539|ref|ZP_02149925.1| flagellar basal-body rod protein; FlgB [Phaeobacter gallaeciensis 2.10] gi|161384124|gb|EDQ08507.1| flagellar basal-body rod protein; FlgB [Phaeobacter gallaeciensis 2.10] gi|161388681|gb|EDQ13034.1| flagellar basal-body rod protein; FlgB [Phaeobacter gallaeciensis BS107] Length = 138 Score = 40.2 bits (92), Expect = 0.23, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 22/53 (41%), Gaps = 1/53 (1%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIKNDID 53 F I + +R + V+ N++N DT G+ +K F EV D Sbjct: 14 LNVFKIAYSMATHAGKRQALVSQNIANADTPGYNAKDIKPFKEVYAQGPRAGD 66 >gi|59712475|ref|YP_205251.1| flagellar hook-associated protein FlgK [Vibrio fischeri ES114] gi|59480576|gb|AAW86363.1| flagellar hook-associated protein 1, FlgK [Vibrio fischeri ES114] Length = 626 Score = 40.2 bits (92), Expect = 0.23, Method: Composition-based stats. Identities = 15/95 (15%), Positives = 39/95 (41%), Gaps = 2/95 (2%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA--IKNDIDQKISFVASG 62 N+G L +++L+T + N++N +T GF V + ++ + A Sbjct: 6 LNLGTQGVLTAQRQLNTTSHNINNVNTEGFSRQSVVQDTNMPHWVSGANLGAGVHVAAVR 65 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESPRG 97 + + + T L+++++ +A + + Sbjct: 66 RSFDQFATNELNLSTTNLNYSMDTEANLDVLTNMM 100 Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 5/38 (13%), Positives = 16/38 (42%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S N E M+ Q + + + ++ +++ ++ Sbjct: 587 SGVNLDEEAANMMKFQQAYMASSRIMKAADETFNSILQ 624 >gi|322435945|ref|YP_004218157.1| flagellar hook-associated protein FlgK [Acidobacterium sp. MP5ACTX9] gi|321163672|gb|ADW69377.1| flagellar hook-associated protein FlgK [Acidobacterium sp. MP5ACTX9] Length = 469 Score = 40.2 bits (92), Expect = 0.23, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 1/43 (2%) Query: 2 QTSFN-IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 +S + A A + L+T A+N++N +TVG+ V F+ Sbjct: 4 LSSLYDLSRGALQADQVALTTTANNVANQNTVGYTRQVVTFAS 46 >gi|296330832|ref|ZP_06873307.1| flagellar basal body rod protein FlgB [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305674350|ref|YP_003866022.1| flagellar component of cell-proximal portion of basal-body rod [Bacillus subtilis subsp. spizizenii str. W23] gi|296151837|gb|EFG92711.1| flagellar basal body rod protein FlgB [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305412594|gb|ADM37713.1| flagellar component of cell-proximal portion of basal-body rod [Bacillus subtilis subsp. spizizenii str. W23] Length = 129 Score = 40.2 bits (92), Expect = 0.23, Method: Composition-based stats. Identities = 7/35 (20%), Positives = 18/35 (51%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 + + +N++N DT ++ KV F ++ + + Sbjct: 21 KQKVITNNIANIDTPNYKAKKVSFQNLLDQESSRL 55 >gi|283833633|ref|ZP_06353374.1| flagellar basal-body rod protein FlgB [Citrobacter youngae ATCC 29220] gi|291071316|gb|EFE09425.1| flagellar basal-body rod protein FlgB [Citrobacter youngae ATCC 29220] Length = 138 Score = 40.2 bits (92), Expect = 0.23, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 26/66 (39%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR +A N++N DT G++ + F+ + + ++ V+ Sbjct: 15 ALNLRAQRQEILAANIANADTPGYQARDLDFASELKKVMVRGREQTGGVSLTLTSAQHIP 74 Query: 71 GSFIST 76 +ST Sbjct: 75 AQTVST 80 >gi|310816851|ref|YP_003964815.1| flagellar hook-associated protein [Ketogulonicigenium vulgare Y25] gi|308755586|gb|ADO43515.1| flagellar hook-associated protein [Ketogulonicigenium vulgare Y25] Length = 468 Score = 40.2 bits (92), Expect = 0.24, Method: Composition-based stats. Identities = 14/81 (17%), Positives = 24/81 (29%), Gaps = 1/81 (1%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 S L+ A+ ++ ++ N+SN T G+ +V S + V Sbjct: 6 SLGNALSGLAAVSRQTEVISSNISNALTEGYARREVALSAS-SIGGRGAGVTVDGVTRAV 64 Query: 64 EYLSKEVGSFISTGTELDFAL 84 T AL Sbjct: 65 NAAITADRRAAQTHMSGALAL 85 >gi|322432999|ref|YP_004210248.1| flagellar basal-body rod protein FlgB [Acidobacterium sp. MP5ACTX9] gi|321165226|gb|ADW70930.1| flagellar basal-body rod protein FlgB [Acidobacterium sp. MP5ACTX9] Length = 117 Score = 40.2 bits (92), Expect = 0.24, Method: Composition-based stats. Identities = 14/36 (38%), Positives = 20/36 (55%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 R T+A NM+N DT G+RT V F + + + D Sbjct: 21 REQTIASNMANVDTPGYRTKDVNFKQAMMTASSGAD 56 >gi|326202856|ref|ZP_08192723.1| flagellar hook-associated protein FlgK [Clostridium papyrosolvens DSM 2782] gi|325986933|gb|EGD47762.1| flagellar hook-associated protein FlgK [Clostridium papyrosolvens DSM 2782] Length = 707 Score = 40.2 bits (92), Expect = 0.24, Method: Composition-based stats. Identities = 6/41 (14%), Positives = 18/41 (43%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S + EM M+ +++ + +++ + M I ++ Sbjct: 663 SGVSMDEEMSNMMKYKFAYDASSRVLNVMDSMMETIITSLG 703 Score = 39.9 bits (91), Expect = 0.33, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 22/75 (29%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 +S+ I + E+ L N+SN T GF + + + K+ G Sbjct: 6 SSYEIARSGLKVSERGLFVTGHNLSNIQTPGFTRQQAIIETNPYITEYGKNGKLFQYGLG 65 Query: 63 KEYLSKEVGSFISTG 77 + Sbjct: 66 ADIQETRQIRHTFLD 80 >gi|113969603|ref|YP_733396.1| flagellar basal body rod protein FlgB [Shewanella sp. MR-4] gi|114046835|ref|YP_737385.1| flagellar basal body rod protein FlgB [Shewanella sp. MR-7] gi|113884287|gb|ABI38339.1| flagellar basal-body rod protein FlgB [Shewanella sp. MR-4] gi|113888277|gb|ABI42328.1| flagellar basal-body rod protein FlgB [Shewanella sp. MR-7] Length = 135 Score = 40.2 bits (92), Expect = 0.24, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 23/59 (38%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76 R ++ N++N DT ++ V FS + K Q+ S +G E + Sbjct: 22 RAEVISSNIANADTPHYKARDVDFSAALNVAKTQQQQRNSLEMTGDEQQHFGLAQLTGQ 80 >gi|209884510|ref|YP_002288367.1| flagellar hook-associated protein FlgK [Oligotropha carboxidovorans OM5] gi|209872706|gb|ACI92502.1| flagellar hook-associated protein FlgK [Oligotropha carboxidovorans OM5] Length = 624 Score = 40.2 bits (92), Expect = 0.24, Method: Composition-based stats. Identities = 11/79 (13%), Positives = 24/79 (30%), Gaps = 1/79 (1%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGF-RTIKVKFSEVVGAIKNDIDQKISFVAS 61 + ++ A + L+ VA N+SN +T G+ R + G + + Sbjct: 5 QALATAMSGLRANQAALALVASNVSNIETPGYVRKSLNQAQTTTGTGSSGVIVTGVNREL 64 Query: 62 GKEYLSKEVGSFISTGTEL 80 + + Sbjct: 65 NVYVQKQVLTETSGASYAT 83 Score = 40.2 bits (92), Expect = 0.28, Method: Composition-based stats. Identities = 17/202 (8%), Positives = 50/202 (24%), Gaps = 3/202 (1%) Query: 43 EVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTR 102 +++ + + AS + G +D + + L Sbjct: 423 DLLNISGDAGGATVVGSASSTITIRDLAGGDPQLPLFVDNGVPYTGAITATGSQQTGLAA 482 Query: 103 DGRFKV---TDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG 159 D +V + + + + G Sbjct: 483 RISVNNLLLADPSRMVIYNTTPTTQAGDTTRVDFILSQLTQGSYYVSPQTGIGSSATPFK 542 Query: 160 LYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 + Q F + + +++ T++ S N EM ++ L Sbjct: 543 GTMLGFLQQFTTMQGQAAASAKQLADGQNVVLSTLQNKLNATSGVNIDEEMAHLLALQNA 602 Query: 220 FNSITTLIDENEKSMLEAIRNI 241 +++ ++ + +R++ Sbjct: 603 YSANARVMSTVKDMFDSLLRSM 624 >gi|317406204|gb|EFV86453.1| flagellar basal-body rod protein [Achromobacter xylosoxidans C54] Length = 135 Score = 40.2 bits (92), Expect = 0.24, Method: Composition-based stats. Identities = 7/57 (12%), Positives = 16/57 (28%), Gaps = 2/57 (3%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLS 67 A R ++ N++N DT ++ F + + + Sbjct: 17 GLRAQ--RQEVLSSNIANADTPNYKARDFDFKAAMQNAMEGSKRLPDTSLTLTSARH 71 >gi|163750573|ref|ZP_02157811.1| flagellar basal-body rod protein FlgB [Shewanella benthica KT99] gi|161329728|gb|EDQ00717.1| flagellar basal-body rod protein FlgB [Shewanella benthica KT99] Length = 132 Score = 40.2 bits (92), Expect = 0.24, Method: Composition-based stats. Identities = 9/60 (15%), Positives = 22/60 (36%) Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76 +R +A N++N DT ++ V F + + A + + + + + Sbjct: 21 KRAEVIASNIANADTPHYKARDVNFDKALQAATSRQGGLAMSRSDSRHFDLTALSQQNYG 80 >gi|225159034|ref|ZP_03725344.1| flagellar basal-body rod protein FlgB [Opitutaceae bacterium TAV2] gi|224802413|gb|EEG20675.1| flagellar basal-body rod protein FlgB [Opitutaceae bacterium TAV2] Length = 144 Score = 40.2 bits (92), Expect = 0.24, Method: Composition-based stats. Identities = 15/72 (20%), Positives = 27/72 (37%), Gaps = 2/72 (2%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVK--FSEVVGAIKNDIDQKISFVASGKEYLSKE 69 A R +A N++N +T GFR + V F+ + A N+ S + + Sbjct: 28 LDAAVLRQEAIASNIANAETPGFRRLDVSSDFAATLRARFNEAAASGSERVQMSDLTPRL 87 Query: 70 VGSFISTGTELD 81 + + D Sbjct: 88 MEDASARTVRPD 99 >gi|237731004|ref|ZP_04561485.1| flagellar basal body rod protein FlgB [Citrobacter sp. 30_2] gi|226906543|gb|EEH92461.1| flagellar basal body rod protein FlgB [Citrobacter sp. 30_2] Length = 138 Score = 40.2 bits (92), Expect = 0.24, Method: Composition-based stats. Identities = 12/66 (18%), Positives = 25/66 (37%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR +A N++N DT G++ + F+ + + ++ V+ Sbjct: 15 ALNLRAQRQEILAANIANADTPGYQARDLDFASELKKVMVRGREETGGVSLTLTSAQHIP 74 Query: 71 GSFIST 76 +S Sbjct: 75 AQTVSA 80 >gi|324325756|gb|ADY21016.1| flagellar hook-associated protein FlgK [Bacillus thuringiensis serovar finitimus YBT-020] Length = 432 Score = 40.2 bits (92), Expect = 0.24, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 25/53 (47%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 N L+ LA + L T N+SN T G+ V + V + + +Q+I + Sbjct: 7 NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSVGASNGHTPEQRIGY 59 Score = 38.3 bits (87), Expect = 0.86, Method: Composition-based stats. Identities = 5/34 (14%), Positives = 11/34 (32%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 N EM ++ + F + + I + Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427 >gi|323498423|ref|ZP_08103419.1| flagellar basal body rod protein FlgB [Vibrio sinaloensis DSM 21326] gi|323316496|gb|EGA69511.1| flagellar basal body rod protein FlgB [Vibrio sinaloensis DSM 21326] Length = 131 Score = 40.2 bits (92), Expect = 0.24, Method: Composition-based stats. Identities = 6/38 (15%), Positives = 20/38 (52%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 E+ ++ N++ +T G+++ + F + + A ++ Sbjct: 20 ERNAEVISTNIAQANTPGYKSKGMDFQKALQAATSEAS 57 >gi|264676567|ref|YP_003276473.1| flagellar basal-body rod protein FlgB [Comamonas testosteroni CNB-2] gi|299531289|ref|ZP_07044699.1| flagellar basal-body rod protein FlgB [Comamonas testosteroni S44] gi|262207079|gb|ACY31177.1| flagellar basal-body rod protein FlgB [Comamonas testosteroni CNB-2] gi|298720696|gb|EFI61643.1| flagellar basal-body rod protein FlgB [Comamonas testosteroni S44] Length = 137 Score = 40.2 bits (92), Expect = 0.24, Method: Composition-based stats. Identities = 12/66 (18%), Positives = 23/66 (34%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A L +R +A N++N DT G+ F E + A + + ++ + Sbjct: 15 ALLLRAERQRAIASNIANADTPGYVARDFNFREALMAATSGPKPLTQASVTTAGHIPLQA 74 Query: 71 GSFIST 76 Sbjct: 75 QMSDEA 80 >gi|148256817|ref|YP_001241402.1| putative flagellar hook-associated protein FlgK [Bradyrhizobium sp. BTAi1] gi|146408990|gb|ABQ37496.1| putative flagellar hook-associated protein 1 (HAP1, FlgK protein) [Bradyrhizobium sp. BTAi1] Length = 611 Score = 40.2 bits (92), Expect = 0.24, Method: Composition-based stats. Identities = 11/73 (15%), Positives = 26/73 (35%) Query: 9 LAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSK 68 ++ + + LS ++ N++N +T G+ EV ++ Sbjct: 1 MSGLRSTQAALSIISSNVANANTPGYVAQNPNQIEVASGGFGSTVMTTGVNRQLDLFVQN 60 Query: 69 EVGSFISTGTELD 81 ++ + S G D Sbjct: 61 QLRTETSGGAYAD 73 Score = 36.8 bits (83), Expect = 2.4, Method: Composition-based stats. Identities = 5/36 (13%), Positives = 15/36 (41%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 N EM +I + +++ ++ + M ++ Sbjct: 573 VNMDSEMSNLIQVQNTYSANAHIMSVVQSMMQSLLQ 608 >gi|301644994|ref|ZP_07244960.1| flagellar hook-associated protein FlgK [Escherichia coli MS 146-1] gi|301076723|gb|EFK91529.1| flagellar hook-associated protein FlgK [Escherichia coli MS 146-1] Length = 293 Score = 40.2 bits (92), Expect = 0.25, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|256833243|ref|YP_003161970.1| flagellar basal body rod protein [Jonesia denitrificans DSM 20603] gi|256686774|gb|ACV09667.1| flagellar basal body rod protein [Jonesia denitrificans DSM 20603] Length = 134 Score = 40.2 bits (92), Expect = 0.25, Method: Composition-based stats. Identities = 8/29 (27%), Positives = 14/29 (48%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTV 32 + I + L V+DN++N +TV Sbjct: 6 AIGIASTGLTVNRKWLDAVSDNLANVNTV 34 Score = 37.5 bits (85), Expect = 1.8, Method: Composition-based stats. Identities = 23/140 (16%), Positives = 44/140 (31%), Gaps = 10/140 (7%) Query: 100 LTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG 159 +T G + G V+ V D + + DE G T G Sbjct: 1 MTTFGAIGIASTGLTVNRKWLDAVSDNLANVNTVRPTDEEAFQARYVIAQAAGGPRDTAG 60 Query: 160 LYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQK 219 + G G P PL D G++ + + +M Q+I + Sbjct: 61 TQVAGIELG----SAEGRLVYEPDHPLADEG------GYVRYPDIDLSSQMSQLIMAQRG 110 Query: 220 FNSITTLIDENEKSMLEAIR 239 + + T +++ + +A+ Sbjct: 111 YQASTAVVERARATYEQALS 130 >gi|83858796|ref|ZP_00952318.1| flagellar basal-body rod protein [Oceanicaulis alexandrii HTCC2633] gi|83853619|gb|EAP91471.1| flagellar basal-body rod protein [Oceanicaulis alexandrii HTCC2633] Length = 138 Score = 40.2 bits (92), Expect = 0.25, Method: Composition-based stats. Identities = 10/70 (14%), Positives = 27/70 (38%), Gaps = 6/70 (8%) Query: 173 ENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEK 232 E+ P P D G+++ N +S+ E+ M + + + T+++ + Sbjct: 74 ESDFRMVYEPGHPAADGE------GYVKYPNVSSLVELMDMRDAQRSYEANLTMVEGTRR 127 Query: 233 SMLEAIRNIA 242 + + + Sbjct: 128 MLERTLDLLR 137 Score = 38.3 bits (87), Expect = 0.89, Method: Composition-based stats. Identities = 9/103 (8%), Positives = 26/103 (25%), Gaps = 8/103 (7%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVV-GAIKNDIDQKI 56 I A A R+ +A+N++N ++ ++ F + ++ + Sbjct: 9 LQISAAGLRAQSSRMRVIAENVANAESTARTPEENPYQRQIPVFESEFDRQVGTELVRMN 68 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 ++ + E + Sbjct: 69 DVALDESDFRMVYEPGHPAADGEGYVKYPNVSSLVELMDMRDA 111 >gi|254785378|ref|YP_003072807.1| flagellar hook-associated protein FlgK [Teredinibacter turnerae T7901] gi|237685158|gb|ACR12422.1| flagellar hook-associated protein FlgK [Teredinibacter turnerae T7901] Length = 1060 Score = 40.2 bits (92), Expect = 0.25, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 27/92 (29%), Gaps = 3/92 (3%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 I + A + LST N+SN G+ +V + Sbjct: 4 NLLGISITGLRAAQASLSTTGHNISNAGVEGYSRQRVNIETNPATFN---GSHYIGSGAN 60 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALES 94 + + + F+S D AL D + Sbjct: 61 IQEIERFANDFVSEQLRQDSALAADMNIYYDY 92 Score = 37.9 bits (86), Expect = 1.4, Method: Composition-based stats. Identities = 21/169 (12%), Positives = 38/169 (22%), Gaps = 2/169 (1%) Query: 74 ISTGTELDFALEGDAWFALESPRGIIL--TRDGRFKVTDDGSLVSASGKYPVLDMASVPI 131 ++ G LD L P +I TR F + + + P Sbjct: 891 MTVGGRLDVTLAEGMSLGTFPPESMIFGDTRVADFAKSAYVGIQAELAGIPDTGDTFTLD 950 Query: 132 QIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSG 191 GK++ + V + + Sbjct: 951 FNWDAASDSRNAMDLVNLATGKLVGGGVASLSESYGALVESVGIDAAAAKINAEAAEQVL 1010 Query: 192 VTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 + S N E +I Q +++ T +I I Sbjct: 1011 SQTTQMRDSLSGVNLDEEAANLIRFEQLYSANTQVISVARDLFDRLINT 1059 >gi|229029423|ref|ZP_04185506.1| Flagellar basal-body rod protein [Bacillus cereus AH1271] gi|228731882|gb|EEL82781.1| Flagellar basal-body rod protein [Bacillus cereus AH1271] Length = 135 Score = 40.2 bits (92), Expect = 0.25, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 20/34 (58%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV 45 L + +TV+ N++N +T G++ V F+E + Sbjct: 12 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQM 45 >gi|238796909|ref|ZP_04640413.1| Flagellar hook-associated protein [Yersinia mollaretii ATCC 43969] gi|238719169|gb|EEQ10981.1| Flagellar hook-associated protein [Yersinia mollaretii ATCC 43969] Length = 547 Score = 40.2 bits (92), Expect = 0.25, Method: Composition-based stats. Identities = 9/57 (15%), Positives = 21/57 (36%), Gaps = 4/57 (7%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 N+ + + + L+ V +N++N T G+ + ++G F Sbjct: 1 MNLINLAQSGLSSAQSALNVVGNNINNAVTPGYSRQNI----MLGQAGGKTTNVGFF 53 >gi|320354314|ref|YP_004195653.1| flagellar basal-body rod protein FlgB [Desulfobulbus propionicus DSM 2032] gi|320122816|gb|ADW18362.1| flagellar basal-body rod protein FlgB [Desulfobulbus propionicus DSM 2032] Length = 137 Score = 40.2 bits (92), Expect = 0.25, Method: Composition-based stats. Identities = 5/40 (12%), Positives = 14/40 (35%) Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56 + + N++N +T G+ F + + + Sbjct: 23 KNQEVIGSNIANAETPGYSAQAFSFEDQLKSAMTGQGLHP 62 >gi|228933027|ref|ZP_04095890.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|229090704|ref|ZP_04221937.1| Flagellar basal-body rod protein [Bacillus cereus Rock3-42] gi|228692646|gb|EEL46372.1| Flagellar basal-body rod protein [Bacillus cereus Rock3-42] gi|228826628|gb|EEM72399.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 138 Score = 40.2 bits (92), Expect = 0.25, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 29/72 (40%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 L + +TV+ N++N +T G++ V F+E + + + S + Sbjct: 15 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNEM 74 Query: 72 SFISTGTELDFA 83 + T+ +A Sbjct: 75 HLPTVNTKNTYA 86 >gi|221069325|ref|ZP_03545430.1| flagellar basal-body rod protein FlgB [Comamonas testosteroni KF-1] gi|220714348|gb|EED69716.1| flagellar basal-body rod protein FlgB [Comamonas testosteroni KF-1] Length = 137 Score = 40.2 bits (92), Expect = 0.25, Method: Composition-based stats. Identities = 12/66 (18%), Positives = 23/66 (34%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A L +R +A N++N DT G+ F E + A + + ++ + Sbjct: 15 ALLLRAERQRAIASNIANADTPGYVARDFNFREALMAATSGPKPLTQASVTTAGHIPLQA 74 Query: 71 GSFIST 76 Sbjct: 75 QMSDEA 80 >gi|75761145|ref|ZP_00741137.1| Flagellar basal-body rod protein flgB [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228900325|ref|ZP_04064555.1| Flagellar basal-body rod protein [Bacillus thuringiensis IBL 4222] gi|74491373|gb|EAO54597.1| Flagellar basal-body rod protein flgB [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228859360|gb|EEN03790.1| Flagellar basal-body rod protein [Bacillus thuringiensis IBL 4222] Length = 138 Score = 40.2 bits (92), Expect = 0.25, Method: Composition-based stats. Identities = 12/72 (16%), Positives = 28/72 (38%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 L + +TV+ N++N +T G++ V F+E + + + S + Sbjct: 15 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNEM 74 Query: 72 SFISTGTELDFA 83 + + +A Sbjct: 75 HLPTVNMKNTYA 86 >gi|311280020|ref|YP_003942251.1| flagellar basal-body rod protein FlgB [Enterobacter cloacae SCF1] gi|308749215|gb|ADO48967.1| flagellar basal-body rod protein FlgB [Enterobacter cloacae SCF1] Length = 138 Score = 40.2 bits (92), Expect = 0.25, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 27/66 (40%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR +A N++N+DT G++ + F+ + + + + S V+ Sbjct: 15 ALNLRAQRQEILAANIANSDTPGYQARDIDFASELKKVMDRGRAETSGVSLALTSERHIP 74 Query: 71 GSFIST 76 +S Sbjct: 75 AQTMSA 80 >gi|228920454|ref|ZP_04083799.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|229178152|ref|ZP_04305523.1| Flagellar basal-body rod protein [Bacillus cereus 172560W] gi|228605282|gb|EEK62732.1| Flagellar basal-body rod protein [Bacillus cereus 172560W] gi|228839084|gb|EEM84380.1| Flagellar basal-body rod protein [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 138 Score = 40.2 bits (92), Expect = 0.25, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 29/72 (40%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 L + +TV+ N++N +T G++ V F+E + + + S + Sbjct: 15 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNEM 74 Query: 72 SFISTGTELDFA 83 + T+ +A Sbjct: 75 HLPTVNTKNTYA 86 >gi|207111252|ref|ZP_03245414.1| flagellar basal body rod protein FlgG [Helicobacter pylori HPKX_438_CA4C1] Length = 27 Score = 40.2 bits (92), Expect = 0.26, Method: Composition-based stats. Identities = 6/27 (22%), Positives = 13/27 (48%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMS 27 M S + LA + + T ++N++ Sbjct: 1 MLRSLYSATSGMLAQQTHIDTTSNNIA 27 >gi|163802606|ref|ZP_02196498.1| flagellar basal body protein [Vibrio sp. AND4] gi|159173689|gb|EDP58508.1| flagellar basal body protein [Vibrio sp. AND4] Length = 131 Score = 40.2 bits (92), Expect = 0.26, Method: Composition-based stats. Identities = 6/38 (15%), Positives = 20/38 (52%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 E+ ++ N++ +T G+++ + F++ + A + Sbjct: 20 ERNAEVISTNIAQANTPGYKSRGLDFAKELQAATSGAS 57 >gi|170725952|ref|YP_001759978.1| flagellar basal body rod protein FlgB [Shewanella woodyi ATCC 51908] gi|169811299|gb|ACA85883.1| flagellar basal-body rod protein FlgB [Shewanella woodyi ATCC 51908] Length = 132 Score = 40.2 bits (92), Expect = 0.26, Method: Composition-based stats. Identities = 9/61 (14%), Positives = 22/61 (36%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIS 75 QR ++ N++N DT ++ + F + + A + + K + + Sbjct: 20 SQRAEVISSNIANADTPHYKARDIDFDKALQAATSQQRGLAMTGSDSKHFDLAALSEQHY 79 Query: 76 T 76 Sbjct: 80 G 80 >gi|320179227|gb|EFW54185.1| Flagellar basal-body rod protein FlgB [Shigella boydii ATCC 9905] Length = 138 Score = 40.2 bits (92), Expect = 0.26, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 22/62 (35%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR +A N++N DT G++ + F+ + + S VA Sbjct: 15 ALNLRAQRQEVLAANIANADTPGYQARDIDFASELKKVMQRGRDATSVVALTMTSTQHIP 74 Query: 71 GS 72 Sbjct: 75 AQ 76 >gi|226327749|ref|ZP_03803267.1| hypothetical protein PROPEN_01622 [Proteus penneri ATCC 35198] gi|225203453|gb|EEG85807.1| hypothetical protein PROPEN_01622 [Proteus penneri ATCC 35198] Length = 136 Score = 40.2 bits (92), Expect = 0.26, Method: Composition-based stats. Identities = 10/66 (15%), Positives = 20/66 (30%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A +R +A N++N DT GF+ + F+ + + + Sbjct: 15 ALSIRNKRQEILAANIANADTPGFQARDIDFASELKKTIENGRTGSHGMQLAMTSERHIP 74 Query: 71 GSFIST 76 Sbjct: 75 IKPGYR 80 >gi|225863602|ref|YP_002748980.1| flagellar basal-body rod protein FlgB [Bacillus cereus 03BB102] gi|229183935|ref|ZP_04311151.1| Flagellar basal-body rod protein [Bacillus cereus BGSC 6E1] gi|225786134|gb|ACO26351.1| flagellar basal-body rod protein FlgB [Bacillus cereus 03BB102] gi|228599587|gb|EEK57191.1| Flagellar basal-body rod protein [Bacillus cereus BGSC 6E1] Length = 135 Score = 40.2 bits (92), Expect = 0.26, Method: Composition-based stats. Identities = 10/32 (31%), Positives = 19/32 (59%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 L + +TV+ N++N +T G++ V F+E Sbjct: 12 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAE 43 >gi|90423028|ref|YP_531398.1| flagellar basal body rod protein FlgB [Rhodopseudomonas palustris BisB18] gi|90105042|gb|ABD87079.1| flagellar basal body rod protein [Rhodopseudomonas palustris BisB18] Length = 136 Score = 40.2 bits (92), Expect = 0.26, Method: Composition-based stats. Identities = 9/24 (37%), Positives = 16/24 (66%) Query: 12 QLALEQRLSTVADNMSNTDTVGFR 35 ++R +ADN++N+DT GF+ Sbjct: 16 MQWHQERQRVLADNIANSDTPGFK 39 >gi|156973583|ref|YP_001444490.1| flagellar basal body rod protein FlgB [Vibrio harveyi ATCC BAA-1116] gi|156525177|gb|ABU70263.1| hypothetical protein VIBHAR_01286 [Vibrio harveyi ATCC BAA-1116] Length = 131 Score = 40.2 bits (92), Expect = 0.27, Method: Composition-based stats. Identities = 6/38 (15%), Positives = 20/38 (52%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 E+ ++ N++ +T G+++ + F++ + A + Sbjct: 20 ERNTEVISTNIAQANTPGYKSRGLDFAKELQAATSGAS 57 >gi|323490135|ref|ZP_08095355.1| flagellar hook-associated protein FlgK [Planococcus donghaensis MPA1U2] gi|323396183|gb|EGA89009.1| flagellar hook-associated protein FlgK [Planococcus donghaensis MPA1U2] Length = 422 Score = 40.2 bits (92), Expect = 0.27, Method: Composition-based stats. Identities = 6/39 (15%), Positives = 16/39 (41%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 + EM ++ +N+ L+ ++ + I +A Sbjct: 383 VSLDEEMANLVKYQHSYNAAARLVSMTDQMLDTIINRMA 421 Score = 36.4 bits (82), Expect = 3.9, Method: Composition-based stats. Identities = 9/37 (24%), Positives = 16/37 (43%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 +G + LST N++N +T G+ +V Sbjct: 7 GLELGKRGLSVGQASLSTTGQNIANVNTKGYSRQQVN 43 >gi|293605000|ref|ZP_06687396.1| flagellar basal-body rod protein FlgB [Achromobacter piechaudii ATCC 43553] gi|292816605|gb|EFF75690.1| flagellar basal-body rod protein FlgB [Achromobacter piechaudii ATCC 43553] Length = 135 Score = 40.2 bits (92), Expect = 0.27, Method: Composition-based stats. Identities = 9/48 (18%), Positives = 16/48 (33%), Gaps = 2/48 (4%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 F A R ++ N++N DT ++ F + D Sbjct: 11 FYQQALGLRAQ--RQEVLSSNIANADTPNYKARDFDFKTAMQNAMEDS 56 >gi|197336362|ref|YP_002156694.1| flagellar hook-associated protein FlgK [Vibrio fischeri MJ11] gi|197317852|gb|ACH67299.1| flagellar hook-associated protein FlgK [Vibrio fischeri MJ11] Length = 626 Score = 40.2 bits (92), Expect = 0.27, Method: Composition-based stats. Identities = 15/95 (15%), Positives = 38/95 (40%), Gaps = 2/95 (2%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA--IKNDIDQKISFVASG 62 N+G L +++L+T + N++N +T GF V + + + A Sbjct: 6 LNLGTQGVLTAQRQLNTTSHNINNVNTEGFSRQSVVQDTNMPHWVSGANFGAGVHVAAVR 65 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALESPRG 97 + + + T L+++++ +A + + Sbjct: 66 RSFDQFATNELNLSTTNLNYSMDTEANLDVLTNMM 100 Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 5/38 (13%), Positives = 16/38 (42%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S N E M+ Q + + + ++ +++ ++ Sbjct: 587 SGVNLDEEAANMMKFQQAYMASSRIMKAADETFNSILQ 624 >gi|34497156|ref|NP_901371.1| flagellar basal-body rod protein flgB [Chromobacterium violaceum ATCC 12472] gi|34103013|gb|AAQ59376.1| probable flagellar basal-body rod protein flgB [Chromobacterium violaceum ATCC 12472] Length = 117 Score = 40.2 bits (92), Expect = 0.27, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 38/100 (38%), Gaps = 2/100 (2%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + +I A R +A N++N +T G++ + F + + D ++F Sbjct: 4 DKALSIHPEALRLRADRTRVLASNIANENTPGYQARDIDFKAALASAAADSP--LAFDDG 61 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101 G + L + G ++ ++E + S LT Sbjct: 62 GGDLLYRLPNHPSRDGNTVELSVEQAEFSQNVSEFQTSLT 101 >gi|15895434|ref|NP_348783.1| flagellar basal body rod protein FlgB [Clostridium acetobutylicum ATCC 824] gi|15025158|gb|AAK80123.1|AE007716_12 Flagellar basal-body rod protein FlgB [Clostridium acetobutylicum ATCC 824] gi|325509580|gb|ADZ21216.1| flagellar basal body rod protein FlgB [Clostridium acetobutylicum EA 2018] Length = 134 Score = 40.2 bits (92), Expect = 0.27, Method: Composition-based stats. Identities = 8/66 (12%), Positives = 25/66 (37%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A +R +++N++N +T ++ V F + + +++ + + + S Sbjct: 20 GLDATSERGKAISNNIANVNTKDYKRYYVSFEDNLKNSMDNLGMERTDSRHINDGASFGD 79 Query: 71 GSFIST 76 Sbjct: 80 IQLKQD 85 >gi|331652135|ref|ZP_08353154.1| flagellar hook-associated protein FlgK [Escherichia coli M718] gi|331050413|gb|EGI22471.1| flagellar hook-associated protein FlgK [Escherichia coli M718] Length = 547 Score = 40.2 bits (92), Expect = 0.27, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIVAQANSTLGAGG 52 >gi|223040539|ref|ZP_03610811.1| flagellar hook-associated protein FlgK [Campylobacter rectus RM3267] gi|222878174|gb|EEF13283.1| flagellar hook-associated protein FlgK [Campylobacter rectus RM3267] Length = 617 Score = 40.2 bits (92), Expect = 0.27, Method: Composition-based stats. Identities = 14/81 (17%), Positives = 30/81 (37%), Gaps = 2/81 (2%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK--FSEVVGAIKNDIDQKISFVA 60 +S +IG+ A + +++T N++N D + +V E I DI Sbjct: 6 SSLHIGMTGLDAAQTQITTTGHNITNADNEHYTRQRVVQSAREAFHDIPGDIGTGTQVDT 65 Query: 61 SGKEYLSKEVGSFISTGTELD 81 + + ++ L+ Sbjct: 66 VVRVHDEFTFARLRTSNINLE 86 Score = 39.9 bits (91), Expect = 0.29, Method: Composition-based stats. Identities = 7/37 (18%), Positives = 14/37 (37%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N E+ +I + + +I EK + + Sbjct: 577 SGVNLNEELTNLIRFQSSYGAAAKIITTVEKMLDTLL 613 >gi|197285513|ref|YP_002151385.1| flagellar basal body rod protein FlgB [Proteus mirabilis HI4320] gi|227356004|ref|ZP_03840396.1| flagellar basal-body rod protein [Proteus mirabilis ATCC 29906] gi|194683000|emb|CAR43449.1| flagellar basal-body rod protein [Proteus mirabilis HI4320] gi|227163992|gb|EEI48894.1| flagellar basal-body rod protein [Proteus mirabilis ATCC 29906] Length = 137 Score = 40.2 bits (92), Expect = 0.27, Method: Composition-based stats. Identities = 10/66 (15%), Positives = 20/66 (30%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A +R +A N++N DT GF+ + F+ + + + Sbjct: 15 ALSLRNKRQEILAANIANADTPGFQARDIDFAAELKKTMENGRTGSHGLQLTMTSERHIP 74 Query: 71 GSFIST 76 Sbjct: 75 IKPGYR 80 >gi|153834443|ref|ZP_01987110.1| flagellar basal-body rod protein FlgB [Vibrio harveyi HY01] gi|269961596|ref|ZP_06175958.1| Flagellar basal-body rod protein flgB [Vibrio harveyi 1DA3] gi|148869139|gb|EDL68171.1| flagellar basal-body rod protein FlgB [Vibrio harveyi HY01] gi|269833637|gb|EEZ87734.1| Flagellar basal-body rod protein flgB [Vibrio harveyi 1DA3] Length = 131 Score = 40.2 bits (92), Expect = 0.28, Method: Composition-based stats. Identities = 6/38 (15%), Positives = 20/38 (52%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 E+ ++ N++ +T G+++ + F++ + A + Sbjct: 20 ERNAEVISTNIAQANTPGYKSRGLDFAKELQAATSGAS 57 >gi|119477956|ref|ZP_01618056.1| Flagellar basal body protein [marine gamma proteobacterium HTCC2143] gi|119448869|gb|EAW30111.1| Flagellar basal body protein [marine gamma proteobacterium HTCC2143] Length = 134 Score = 40.2 bits (92), Expect = 0.28, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 28/80 (35%), Gaps = 4/80 (5%) Query: 1 MQTSFNIGLA----AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56 M SF L A R +A+N+ N DT F+ + F + + + Sbjct: 1 MAISFQNALGIHEKALHVRTMRAEVLANNLVNADTPNFKARDIDFKSALNSEMSSQSASR 60 Query: 57 SFVASGKEYLSKEVGSFIST 76 VA+ ++ S+ Sbjct: 61 GMVATNSRHIGGASQSYQPE 80 >gi|118477179|ref|YP_894330.1| flagellar basal body rod protein FlgB [Bacillus thuringiensis str. Al Hakam] gi|118416404|gb|ABK84823.1| flagellar basal-body rod protein [Bacillus thuringiensis str. Al Hakam] Length = 138 Score = 40.2 bits (92), Expect = 0.28, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 20/34 (58%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVV 45 L + +TV+ N++N +T G++ V F+E + Sbjct: 15 MNYLVTKRNTVSSNIANANTPGYKAQDVTFAEQM 48 >gi|304310891|ref|YP_003810489.1| Flagellar hook-associated protein 1 [gamma proteobacterium HdN1] gi|301796624|emb|CBL44836.1| Flagellar hook-associated protein 1 [gamma proteobacterium HdN1] Length = 668 Score = 40.2 bits (92), Expect = 0.28, Method: Composition-based stats. Identities = 19/157 (12%), Positives = 39/157 (24%), Gaps = 1/157 (0%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M IGL+ + + LST + N+ N T G+ +V S + IK Sbjct: 1 MADITQIGLSGLMVSKSALSTTSHNIVNVGTDGYSRQRVDISAI-DPIKLGGKYIGQGAI 59 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120 + D++F +L ++ Sbjct: 60 VNGISRITNTFLTDQLRRDTQNFNSYDSYFDFAGRVDSLLGDQSTAITPTLQGFFNSVQD 119 Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIAT 157 + Q+ + + ++ Sbjct: 120 LNNDPASIPIRQVMLSEANALTNRFNTVYEQLYQQNQ 156 >gi|328543140|ref|YP_004303249.1| flagellar hook-associated protein FlgK [polymorphum gilvum SL003B-26A1] gi|326412886|gb|ADZ69949.1| Flagellar hook-associated protein FlgK [Polymorphum gilvum SL003B-26A1] Length = 617 Score = 39.9 bits (91), Expect = 0.28, Method: Composition-based stats. Identities = 3/38 (7%), Positives = 15/38 (39%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 + E+ +I L + + ++ ++ + ++ Sbjct: 580 VDVDAELAFLIELQNAYAANARVMQAAKEMFDVLLNSV 617 >gi|311068139|ref|YP_003973062.1| flagellar basal body rod protein FlgB [Bacillus atrophaeus 1942] gi|310868656|gb|ADP32131.1| flagellar basal body rod protein FlgB [Bacillus atrophaeus 1942] Length = 129 Score = 39.9 bits (91), Expect = 0.28, Method: Composition-based stats. Identities = 8/45 (17%), Positives = 20/45 (44%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54 A + + +N++N DT ++ KV F ++ + ++ Sbjct: 13 NALGRANVKQKVITNNIANIDTPNYKAKKVSFQNLLNQESSRLES 57 >gi|260767920|ref|ZP_05876854.1| flagellar basal-body rod protein FlgB [Vibrio furnissii CIP 102972] gi|260615950|gb|EEX41135.1| flagellar basal-body rod protein FlgB [Vibrio furnissii CIP 102972] gi|315179623|gb|ADT86537.1| flagellar basal body rod protein [Vibrio furnissii NCTC 11218] Length = 120 Score = 39.9 bits (91), Expect = 0.28, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 33/105 (31%), Gaps = 5/105 (4%) Query: 1 MQTSFNIGLA----AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56 M SF L A QR +A N++N DT G+ + F V+ N Sbjct: 1 MAISFETALGVHPEALNFRVQRTKVLASNLANVDTPGYLAKDLTFKTVMSTAGNRGVNPG 60 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101 + S + G ++ +E + LT Sbjct: 61 IPEWQVESQYSIPYQNSK-NGNTVELGVEQAKFTQNNMDFQTSLT 104 >gi|255592868|ref|XP_002535736.1| conserved hypothetical protein [Ricinus communis] gi|223522123|gb|EEF26647.1| conserved hypothetical protein [Ricinus communis] Length = 274 Score = 39.9 bits (91), Expect = 0.28, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 A Q L +A N++N DT G++ + + +E + K+ D + + Sbjct: 177 GLRAYRQEL--LASNIANADTPGYKAVDIDINEALRTGKSKDDAPLLYRM 224 >gi|329849688|ref|ZP_08264534.1| flagellar basal-body rod protein FlgB [Asticcacaulis biprosthecum C19] gi|328841599|gb|EGF91169.1| flagellar basal-body rod protein FlgB [Asticcacaulis biprosthecum C19] Length = 137 Score = 39.9 bits (91), Expect = 0.28, Method: Composition-based stats. Identities = 10/67 (14%), Positives = 21/67 (31%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69 + R VA+N++N T GF+ + + ++ + Q + Sbjct: 14 SRMGWHSDRQKVVAENVANASTPGFKPHDLSPQDFEKMVRGETPQGNLGLTMTNTQHMAP 73 Query: 70 VGSFIST 76 F Sbjct: 74 ATPFSPG 80 >gi|221640830|ref|YP_002527092.1| flagellar basal body rod protein FlgB [Rhodobacter sphaeroides KD131] gi|221161611|gb|ACM02591.1| Flagellar basal-body rod protein FlgB [Rhodobacter sphaeroides KD131] Length = 127 Score = 39.9 bits (91), Expect = 0.28, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 14/44 (31%), Gaps = 1/44 (2%) Query: 8 GLAAQLALEQRLSTVADNMSNTDTVGFRT-IKVKFSEVVGAIKN 50 + R VA N++N DT G+R F Sbjct: 11 AQSMARHAGLRTEVVAHNLANADTPGYRAQDLPDFESYASGTVG 54 >gi|119384842|ref|YP_915898.1| flagellar basal body rod protein FlgB [Paracoccus denitrificans PD1222] gi|119374609|gb|ABL70202.1| flagellar basal-body rod protein FlgB [Paracoccus denitrificans PD1222] Length = 129 Score = 39.9 bits (91), Expect = 0.28, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 27/76 (35%), Gaps = 8/76 (10%) Query: 9 LAAQLALE-QRLSTVADNMSNTDTVGFR-TIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66 ++ A +R +A N++N DT GFR F+E + + + + + Sbjct: 11 ASSLTAHAVERQKLIARNVANADTPGFRSRDLAGFAETYRSHG------PTGMRASRPGH 64 Query: 67 SKEVGSFISTGTELDF 82 E G D Sbjct: 65 LTEGRGGDGAGRITDA 80 >gi|251789165|ref|YP_003003886.1| flagellar basal-body rod protein FlgB [Dickeya zeae Ech1591] gi|247537786|gb|ACT06407.1| flagellar basal-body rod protein FlgB [Dickeya zeae Ech1591] Length = 139 Score = 39.9 bits (91), Expect = 0.29, Method: Composition-based stats. Identities = 11/65 (16%), Positives = 21/65 (32%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR +A N++N DT G++ + F+ + + V+ Sbjct: 15 ALNLRAQRQEILAANIANADTPGYQARDIDFASELNKVMEKGRVDGQSVSLSLTSSRHIP 74 Query: 71 GSFIS 75 Sbjct: 75 AQTAQ 79 >gi|15801190|ref|NP_287207.1| flagellar basal body rod protein FlgB [Escherichia coli O157:H7 EDL933] gi|15830705|ref|NP_309478.1| flagellar basal body rod protein FlgB [Escherichia coli O157:H7 str. Sakai] gi|168747151|ref|ZP_02772173.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7 str. EC4113] gi|168758635|ref|ZP_02783642.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7 str. EC4401] gi|168764485|ref|ZP_02789492.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7 str. EC4501] gi|168767732|ref|ZP_02792739.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7 str. EC4486] gi|168773918|ref|ZP_02798925.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7 str. EC4196] gi|168783603|ref|ZP_02808610.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7 str. EC4076] gi|168790008|ref|ZP_02815015.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7 str. EC869] gi|168802018|ref|ZP_02827025.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7 str. EC508] gi|195935463|ref|ZP_03080845.1| flagellar basal body rod protein FlgB [Escherichia coli O157:H7 str. EC4024] gi|208809503|ref|ZP_03251840.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7 str. EC4206] gi|208815239|ref|ZP_03256418.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7 str. EC4045] gi|208822644|ref|ZP_03262963.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7 str. EC4042] gi|209398681|ref|YP_002269919.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7 str. EC4115] gi|217328423|ref|ZP_03444505.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7 str. TW14588] gi|254792455|ref|YP_003077292.1| flagellar basal body rod protein FlgB [Escherichia coli O157:H7 str. TW14359] gi|261227022|ref|ZP_05941303.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli O157:H7 str. FRIK2000] gi|261256256|ref|ZP_05948789.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli O157:H7 str. FRIK966] gi|291282093|ref|YP_003498911.1| Flagellar basal-body rod protein FlgB [Escherichia coli O55:H7 str. CB9615] gi|12514611|gb|AAG55819.1|AE005317_8 flagellar biosynthesis, cell-proximal portion of basal-body rod [Escherichia coli O157:H7 str. EDL933] gi|13360915|dbj|BAB34874.1| flagellar rod protein FlgB [Escherichia coli O157:H7 str. Sakai] gi|187770374|gb|EDU34218.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7 str. EC4196] gi|188018167|gb|EDU56289.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7 str. EC4113] gi|188999105|gb|EDU68091.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7 str. EC4076] gi|189354564|gb|EDU72983.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7 str. EC4401] gi|189363078|gb|EDU81497.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7 str. EC4486] gi|189365535|gb|EDU83951.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7 str. EC4501] gi|189370453|gb|EDU88869.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7 str. EC869] gi|189375929|gb|EDU94345.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7 str. EC508] gi|208729304|gb|EDZ78905.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7 str. EC4206] gi|208731887|gb|EDZ80575.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7 str. EC4045] gi|208738129|gb|EDZ85812.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7 str. EC4042] gi|209160081|gb|ACI37514.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7 str. EC4115] gi|209773408|gb|ACI85016.1| flagellar rod protein FlgB [Escherichia coli] gi|209773410|gb|ACI85017.1| flagellar rod protein FlgB [Escherichia coli] gi|209773412|gb|ACI85018.1| flagellar rod protein FlgB [Escherichia coli] gi|209773414|gb|ACI85019.1| flagellar rod protein FlgB [Escherichia coli] gi|209773416|gb|ACI85020.1| flagellar rod protein FlgB [Escherichia coli] gi|217318850|gb|EEC27276.1| flagellar basal-body rod protein FlgB [Escherichia coli O157:H7 str. TW14588] gi|254591855|gb|ACT71216.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli O157:H7 str. TW14359] gi|290761966|gb|ADD55927.1| Flagellar basal-body rod protein FlgB [Escherichia coli O55:H7 str. CB9615] gi|320189756|gb|EFW64412.1| Flagellar basal-body rod protein FlgB [Escherichia coli O157:H7 str. EC1212] gi|320637524|gb|EFX07324.1| flagellar basal body rod protein FlgB [Escherichia coli O157:H7 str. G5101] gi|320643085|gb|EFX12286.1| flagellar basal body rod protein FlgB [Escherichia coli O157:H- str. 493-89] gi|320648543|gb|EFX17198.1| flagellar basal body rod protein FlgB [Escherichia coli O157:H- str. H 2687] gi|320653857|gb|EFX21931.1| flagellar basal body rod protein FlgB [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320659337|gb|EFX26906.1| flagellar basal body rod protein FlgB [Escherichia coli O55:H7 str. USDA 5905] gi|320664472|gb|EFX31623.1| flagellar basal body rod protein FlgB [Escherichia coli O157:H7 str. LSU-61] gi|326339295|gb|EGD63109.1| Flagellar basal-body rod protein FlgB [Escherichia coli O157:H7 str. 1125] gi|326344744|gb|EGD68492.1| Flagellar basal-body rod protein FlgB [Escherichia coli O157:H7 str. 1044] Length = 138 Score = 39.9 bits (91), Expect = 0.29, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 22/62 (35%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR +A N++N DT G++ + F+ + + S VA Sbjct: 15 ALNLRAQRQEVLAANIANADTPGYQARDIDFASELKKVMQRGRNATSVVALTMTSTQHIP 74 Query: 71 GS 72 Sbjct: 75 AQ 76 >gi|95928660|ref|ZP_01311407.1| Flagellar hook-associated protein [Desulfuromonas acetoxidans DSM 684] gi|95135450|gb|EAT17102.1| Flagellar hook-associated protein [Desulfuromonas acetoxidans DSM 684] Length = 465 Score = 39.9 bits (91), Expect = 0.29, Method: Composition-based stats. Identities = 12/79 (15%), Positives = 25/79 (31%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + N G + ++ + +N++N T G+ +K S N I V + Sbjct: 7 ALNTGKTGLMVSQKGIEVTGNNLTNASTEGYSRQVLKVSSSPALEHNGIIVGHGAVVTAI 66 Query: 64 EYLSKEVGSFISTGTELDF 82 + D+ Sbjct: 67 ARQESVFVTKQLINKSGDY 85 >gi|315125990|ref|YP_004067993.1| lateral flagellar hook-associated protein [Pseudoalteromonas sp. SM9913] gi|315014504|gb|ADT67842.1| lateral flagellar hook-associated protein [Pseudoalteromonas sp. SM9913] Length = 435 Score = 39.9 bits (91), Expect = 0.29, Method: Composition-based stats. Identities = 6/38 (15%), Positives = 16/38 (42%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S N E ++H Q +++ +I ++ ++ Sbjct: 396 SGVNLDEEAANLMHFQQMYSANAKVISTADQMFKSLLQ 433 Score = 39.5 bits (90), Expect = 0.38, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 16/42 (38%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 + N L+ A L+ N++N G+ + +F Sbjct: 1 MSMLNNALSGLNAANIALTVSGQNVANAAVEGYSRQQAQFKT 42 >gi|47566121|ref|ZP_00237159.1| flagellar hook-associated protein 1, putative [Bacillus cereus G9241] gi|47557038|gb|EAL15368.1| flagellar hook-associated protein 1, putative [Bacillus cereus G9241] Length = 432 Score = 39.9 bits (91), Expect = 0.29, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 33/101 (32%), Gaps = 6/101 (5%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65 N L+ LA + L T N+SN T G+ V + VGA ++ Sbjct: 7 NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGS-VGASNGHTPEQRIGYGVQTLG 65 Query: 66 LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106 + + + + + F+ + L+R Sbjct: 66 VDRITDEVKTRQFN-----DQMSQFSYYAYMNSTLSRVESM 101 Score = 39.1 bits (89), Expect = 0.55, Method: Composition-based stats. Identities = 18/196 (9%), Positives = 43/196 (21%), Gaps = 4/196 (2%) Query: 44 VVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRD 103 V+ D L G + A++ A Sbjct: 234 VLTVNGQDTYPLQLQKNKEPMSLQIYGTDIPLNGGAIQSAIDTKAKITGYKDNLNEFVNS 293 Query: 104 GRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSV 163 + +V + G+ + + ++ + GL Sbjct: 294 LKKQVNTVMNKDFFVGEDAKKLEINPDFTKDISKMKISAETANRLAGITEEDFKPGLTYK 353 Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGVTVKR--GFLEDSNANSMYEMGQMIHLTQKFN 221 + S S + +++ +E N EM ++ + F Sbjct: 354 QALDQLLVGVASDKSSVNAYQNIHKDLLEGIQQEKMSVEG--VNMEEEMVNLMAFQKYFV 411 Query: 222 SITTLIDENEKSMLEA 237 + + I + Sbjct: 412 ANSKAITTMNEVFDSL 427 >gi|167725936|ref|ZP_02409172.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei DM98] Length = 452 Score = 39.9 bits (91), Expect = 0.29, Method: Composition-based stats. Identities = 23/195 (11%), Positives = 50/195 (25%), Gaps = 1/195 (0%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 IG++ A Q L + N +N T G+ V S + + + S Sbjct: 1 MNIIYIGMSGIRAANQSLLAASQNTANIATGGYSRRGVLLSTGLTGGVDASG-LLRLNES 59 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 K + + +P + G+L +ASG Sbjct: 60 YKTQQLWQAAGQYGRYDAAQTYFDQLEALFGGNPVDGKTQANDLGFGKFIGALEAASGDP 119 Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 + + I + ++ + + I + +V+ G + Sbjct: 120 GDSVLRNGVIDAANSMTKQFNNMRSVLTNQLRSIEQQRVTTVEQVNGLAKTVAELNGKIA 179 Query: 182 PPTPLEDLSGVTVKR 196 + + Sbjct: 180 AGQASGADVSALMDQ 194 >gi|194365325|ref|YP_002027935.1| hypothetical protein Smal_1547 [Stenotrophomonas maltophilia R551-3] gi|194348129|gb|ACF51252.1| conserved hypothetical protein [Stenotrophomonas maltophilia R551-3] Length = 99 Score = 39.9 bits (91), Expect = 0.29, Method: Composition-based stats. Identities = 8/32 (25%), Positives = 13/32 (40%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32 M I L+ +Q + A N++N T Sbjct: 1 MNNVMGIALSGMRVAQQGVQVAAHNVANLATP 32 >gi|255322686|ref|ZP_05363830.1| flagellar hook-associated protein FlgK [Campylobacter showae RM3277] gi|255300247|gb|EET79520.1| flagellar hook-associated protein FlgK [Campylobacter showae RM3277] Length = 617 Score = 39.9 bits (91), Expect = 0.29, Method: Composition-based stats. Identities = 7/38 (18%), Positives = 14/38 (36%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S N E+ +I + + +I EK + + Sbjct: 577 SGVNLNEELTNLIRFQSSYGAAAKIITTVEKMLDTLLT 614 Score = 39.1 bits (89), Expect = 0.51, Method: Composition-based stats. Identities = 13/81 (16%), Positives = 32/81 (39%), Gaps = 2/81 (2%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK--FSEVVGAIKNDIDQKISFVA 60 +S +IG++ A + +++T N++N D+ + +V E + DI Sbjct: 6 SSLHIGVSGLDAAQTQITTTGHNITNADSEHYTRQRVVQSAREPFHDMPGDIGTGTKVDT 65 Query: 61 SGKEYLSKEVGSFISTGTELD 81 + + ++ L+ Sbjct: 66 VVRVHDEFTFARLRTSNINLE 86 >gi|209521596|ref|ZP_03270294.1| flagellar hook-associated protein FlgK [Burkholderia sp. H160] gi|209497979|gb|EDZ98136.1| flagellar hook-associated protein FlgK [Burkholderia sp. H160] Length = 664 Score = 39.9 bits (91), Expect = 0.29, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 27/68 (39%), Gaps = 1/68 (1%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 NIGL+ A + L+T +N+SN T G+ +SE VG V++ Sbjct: 4 NLLNIGLSGLSAAQWGLTTTGENISNASTAGYTMETPVYSE-VGGTYTGSGYLPMGVSTD 62 Query: 63 KEYLSKEV 70 + Sbjct: 63 TVTRAYSQ 70 Score = 37.2 bits (84), Expect = 2.2, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 13/37 (35%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N E ++ Q + + + +I + + Sbjct: 624 SGVNINEEAANLLQYQQLYQANSKVIQTAQTLFQTLL 660 >gi|167905095|ref|ZP_02492300.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei NCTC 13177] Length = 452 Score = 39.9 bits (91), Expect = 0.29, Method: Composition-based stats. Identities = 23/195 (11%), Positives = 50/195 (25%), Gaps = 1/195 (0%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 IG++ A Q L + N +N T G+ V S + + + S Sbjct: 1 MNIIYIGMSGIRAANQSLLAASQNTANIATGGYSRRGVLLSTGLTGGVDASG-LLRLNES 59 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 K + + +P + G+L +ASG Sbjct: 60 YKTQQLWQAAGQYGRYDAAQTYFDQLEALFGGNPVDGKTQANDLGFGKFIGALEAASGDP 119 Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 + + I + ++ + + I + +V+ G + Sbjct: 120 GDSVLRNGVIDAANSMTKQFNNMRSVLTNQLRSIEQQRVTTVEQVNGLAKTVAELNGKIA 179 Query: 182 PPTPLEDLSGVTVKR 196 + + Sbjct: 180 AGQASGADVSALMDQ 194 >gi|332284025|ref|YP_004415936.1| flagellar hook-associated protein FlgK [Pusillimonas sp. T7-7] gi|330427978|gb|AEC19312.1| flagellar hook-associated protein FlgK [Pusillimonas sp. T7-7] Length = 553 Score = 39.9 bits (91), Expect = 0.30, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 17/38 (44%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39 N+GL A + RL T N++N T G+ V Sbjct: 1 MNLANLGLTGLNAAQNRLQTAGHNINNAATEGYNRQSV 38 >gi|217959222|ref|YP_002337770.1| flagellar hook-associated protein FlgK [Bacillus cereus AH187] gi|217064765|gb|ACJ79015.1| putative flagellar hook-associated protein [Bacillus cereus AH187] Length = 432 Score = 39.9 bits (91), Expect = 0.30, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 25/53 (47%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 N L+ LA + L T N+SN T G+ V + V + + +Q+I + Sbjct: 7 NTPLSGMLAAQMGLQTTRQNLSNIHTPGYVRQMVNYGSVGASNGHTPEQRIGY 59 Score = 38.3 bits (87), Expect = 0.91, Method: Composition-based stats. Identities = 5/34 (14%), Positives = 11/34 (32%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 N EM ++ + F + + I + Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427 >gi|134280799|ref|ZP_01767509.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei 305] gi|125657224|gb|ABN48712.1| flagellar hook-associated protein [Burkholderia pseudomallei] gi|134247821|gb|EBA47905.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei 305] Length = 452 Score = 39.9 bits (91), Expect = 0.30, Method: Composition-based stats. Identities = 23/195 (11%), Positives = 50/195 (25%), Gaps = 1/195 (0%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 IG++ A Q L + N +N T G+ V S + + + S Sbjct: 1 MNIIYIGMSGIRAANQSLLAASQNTANIATGGYSRRGVLLSTGLTGGVDASG-LLRLNES 59 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 K + + +P + G+L +ASG Sbjct: 60 YKTQQLWQAAGQYGRYDAAQTYFDQLEALFGGNPVDGKTQANDLGFGKFIGALEAASGDP 119 Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 + + I + ++ + + I + +V+ G + Sbjct: 120 GDSVLRNGVIDAANSMTKQFNNMRSVLTNQLRSIEQQRVTTVEQVNGLAKTVAELNGKIA 179 Query: 182 PPTPLEDLSGVTVKR 196 + + Sbjct: 180 AGQASGADVSALMDQ 194 >gi|42780831|ref|NP_978078.1| flagellar hook-associated protein FlgK [Bacillus cereus ATCC 10987] gi|222095362|ref|YP_002529422.1| flagellar hook-associated protein flgk [Bacillus cereus Q1] gi|42736751|gb|AAS40686.1| flagellar hook-associated protein, putative [Bacillus cereus ATCC 10987] gi|221239420|gb|ACM12130.1| flagellar hook-associated protein 1 [Bacillus cereus Q1] Length = 432 Score = 39.9 bits (91), Expect = 0.30, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 25/53 (47%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 N L+ LA + L T N+SN T G+ V + V + + +Q+I + Sbjct: 7 NTPLSGMLAAQMGLQTTRQNLSNIHTPGYVRQMVNYGSVGASNGHTPEQRIGY 59 Score = 38.3 bits (87), Expect = 0.89, Method: Composition-based stats. Identities = 5/34 (14%), Positives = 11/34 (32%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 N EM ++ + F + + I + Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427 >gi|320530514|ref|ZP_08031572.1| flagellar hook-associated protein FlgK [Selenomonas artemidis F0399] gi|320137347|gb|EFW29271.1| flagellar hook-associated protein FlgK [Selenomonas artemidis F0399] Length = 582 Score = 39.9 bits (91), Expect = 0.30, Method: Composition-based stats. Identities = 10/137 (7%), Positives = 41/137 (29%), Gaps = 2/137 (1%) Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 ++ S + + K + G + + ++T+ + Sbjct: 445 TISAGSSTYTYDNSWINGTGDGTMAVELSKLFNTDQGSSMNPAGTERPVSTISINQYYN- 503 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 G + + + +D + + + N E+ M+ + + + + Sbjct: 504 -GIMSKLGANAETVDKKLKQQDDLITQITQWRQSTAGVNWNEELTNMLKFQTGYGACSRV 562 Query: 227 IDENEKSMLEAIRNIAS 243 + ++ + + I + + Sbjct: 563 LTSMDEMLDKLINSTGT 579 Score = 39.9 bits (91), Expect = 0.34, Method: Composition-based stats. Identities = 8/49 (16%), Positives = 17/49 (34%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 N + + L T N++N T G+ V + ++ + Sbjct: 7 GLNTMVKGIQNNQLSLDTTGHNITNASTPGYSRQSVNSAATNYQERSSL 55 >gi|241766917|ref|ZP_04764723.1| flagellar basal-body rod protein FlgB [Acidovorax delafieldii 2AN] gi|241362621|gb|EER58469.1| flagellar basal-body rod protein FlgB [Acidovorax delafieldii 2AN] Length = 147 Score = 39.9 bits (91), Expect = 0.31, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 18/47 (38%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56 A + +R +A N++N DT G+ F+E + Sbjct: 14 NALMLRAERQRAIASNIANADTPGYVARDFNFAETLREATGAGSATS 60 >gi|228920449|ref|ZP_04083794.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228839079|gb|EEM84375.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 432 Score = 39.9 bits (91), Expect = 0.31, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 25/53 (47%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 N L+ LA + L T N+SN T G+ V + V + + +Q+I + Sbjct: 7 NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSVGASNGHTPEQRIGY 59 Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 5/34 (14%), Positives = 11/34 (32%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 N EM ++ + F + + I + Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427 >gi|229058370|ref|ZP_04196754.1| Flagellar hook-associated protein FlgK [Bacillus cereus AH603] gi|228719879|gb|EEL71469.1| Flagellar hook-associated protein FlgK [Bacillus cereus AH603] Length = 432 Score = 39.9 bits (91), Expect = 0.31, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 25/53 (47%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 N L+ LA + L T N+SN T G+ V + V + + +Q+I + Sbjct: 7 NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSVGASNGHTPEQRIGY 59 Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 5/34 (14%), Positives = 11/34 (32%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 N EM ++ + F + + I + Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427 >gi|210135277|ref|YP_002301716.1| flagellar hook-associated protein FlgK [Helicobacter pylori P12] gi|210133245|gb|ACJ08236.1| flagellar hook-associated protein 1 [Helicobacter pylori P12] Length = 606 Score = 39.9 bits (91), Expect = 0.31, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 14/37 (37%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S + EM +I + + +I ++ + + Sbjct: 566 SQVSVDEEMLNLIKFQSGYAANAKVITAIDRMIDTLL 602 Score = 38.7 bits (88), Expect = 0.67, Method: Composition-based stats. Identities = 6/29 (20%), Positives = 11/29 (37%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTD 30 +S N A + + +N+SN Sbjct: 5 LSSLNTSYTGLQAHQSMVDVTGNNISNAS 33 >gi|126445158|ref|YP_001061252.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei 668] gi|126224649|gb|ABN88154.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei 668] Length = 452 Score = 39.9 bits (91), Expect = 0.31, Method: Composition-based stats. Identities = 23/195 (11%), Positives = 50/195 (25%), Gaps = 1/195 (0%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 IG++ A Q L + N +N T G+ V S + + + S Sbjct: 1 MNIIYIGMSGIRAANQSLLAASQNTANIATGGYSRRGVLLSTGLTGGVDASG-LLRLNES 59 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 K + + +P + G+L +ASG Sbjct: 60 YKTQQLWQAAGQYGRYDAAQTYFDQLEALFGGNPVDGKTQANDLGFGKFIGALEAASGDP 119 Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 + + I + ++ + + I + +V+ G + Sbjct: 120 GDSVLRNGVIDAANSMTKQFNNMRSVLTNQLRSIEQQRVTTVEQVNGLAKTVAELNGKIA 179 Query: 182 PPTPLEDLSGVTVKR 196 + + Sbjct: 180 AGQASGADVSALMDQ 194 >gi|238782789|ref|ZP_04626818.1| Flagellar basal-body rod protein flgB [Yersinia bercovieri ATCC 43970] gi|238716212|gb|EEQ08195.1| Flagellar basal-body rod protein flgB [Yersinia bercovieri ATCC 43970] Length = 135 Score = 39.9 bits (91), Expect = 0.31, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 21/45 (46%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK 55 A L QR +A N++N DT G+ + FS+ + + + Sbjct: 15 ALRLLTQRQDILASNIANVDTPGYLARDIDFSQQLKTAVDRSAPE 59 >gi|313896955|ref|ZP_07830502.1| flagellar hook-associated protein FlgK [Selenomonas sp. oral taxon 137 str. F0430] gi|312974402|gb|EFR39870.1| flagellar hook-associated protein FlgK [Selenomonas sp. oral taxon 137 str. F0430] Length = 582 Score = 39.9 bits (91), Expect = 0.31, Method: Composition-based stats. Identities = 10/137 (7%), Positives = 41/137 (29%), Gaps = 2/137 (1%) Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 ++ S + + K + G + + ++T+ + Sbjct: 445 TISAGSSTYTYDNSWINGTGDGTMAVELSKLFNTDQGSSMNPAGTERPVSTISINQYYN- 503 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 G + + + +D + + + N E+ M+ + + + + Sbjct: 504 -GIMSKLGANAETVDKKLKQQDDLITQITQWRQSTAGVNWNEELTNMLKFQTGYGACSRV 562 Query: 227 IDENEKSMLEAIRNIAS 243 + ++ + + I + + Sbjct: 563 LTSMDEMLDKLINSTGT 579 Score = 39.9 bits (91), Expect = 0.35, Method: Composition-based stats. Identities = 8/49 (16%), Positives = 17/49 (34%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 N + + L T N++N T G+ V + ++ + Sbjct: 7 GLNTMVKGIQNNQLSLDTTGHNITNASTPGYSRQSVNSAATNYQERSSL 55 >gi|229166579|ref|ZP_04294331.1| Flagellar hook-associated protein FlgK [Bacillus cereus AH621] gi|228616833|gb|EEK73906.1| Flagellar hook-associated protein FlgK [Bacillus cereus AH621] Length = 432 Score = 39.9 bits (91), Expect = 0.31, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 25/53 (47%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 N L+ LA + L T N+SN T G+ V + V + + +Q+I + Sbjct: 7 NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSVGASNGHTPEQRIGY 59 Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 5/34 (14%), Positives = 11/34 (32%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 N EM ++ + F + + I + Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427 >gi|163939544|ref|YP_001644428.1| flagellar hook-associated protein FlgK [Bacillus weihenstephanensis KBAB4] gi|163861741|gb|ABY42800.1| flagellar hook-associated protein FlgK [Bacillus weihenstephanensis KBAB4] Length = 432 Score = 39.9 bits (91), Expect = 0.31, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 25/53 (47%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 N L+ LA + L T N+SN T G+ V + V + + +Q+I + Sbjct: 7 NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSVGASNGHTPEQRIGY 59 Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 5/34 (14%), Positives = 11/34 (32%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 N EM ++ + F + + I + Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427 >gi|229096224|ref|ZP_04227197.1| Flagellar hook-associated protein FlgK [Bacillus cereus Rock3-29] gi|229102337|ref|ZP_04233045.1| Flagellar hook-associated protein FlgK [Bacillus cereus Rock3-28] gi|229115179|ref|ZP_04244589.1| Flagellar hook-associated protein FlgK [Bacillus cereus Rock1-3] gi|228668319|gb|EEL23751.1| Flagellar hook-associated protein FlgK [Bacillus cereus Rock1-3] gi|228680984|gb|EEL35153.1| Flagellar hook-associated protein FlgK [Bacillus cereus Rock3-28] gi|228687184|gb|EEL41089.1| Flagellar hook-associated protein FlgK [Bacillus cereus Rock3-29] Length = 432 Score = 39.9 bits (91), Expect = 0.32, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 25/53 (47%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 N L+ LA + L T N+SN T G+ V + V + + +Q+I + Sbjct: 7 NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSVGASNGHTPEQRIGY 59 Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 5/34 (14%), Positives = 11/34 (32%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 N EM ++ + F + + I + Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427 >gi|323495380|ref|ZP_08100457.1| flagellar basal body rod protein FlgB [Vibrio brasiliensis LMG 20546] gi|323310303|gb|EGA63490.1| flagellar basal body rod protein FlgB [Vibrio brasiliensis LMG 20546] Length = 131 Score = 39.9 bits (91), Expect = 0.32, Method: Composition-based stats. Identities = 6/38 (15%), Positives = 20/38 (52%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 E+ ++ N++ +T G+++ + F + + A ++ Sbjct: 20 ERNAEVISTNIAQANTPGYKSKGMDFQKALQAATSEAS 57 >gi|258622486|ref|ZP_05717508.1| Flagellar basal-body rod protein C [Vibrio mimicus VM573] gi|262173352|ref|ZP_06041029.1| flagellar basal-body rod protein FlgC [Vibrio mimicus MB-451] gi|258585186|gb|EEW09913.1| Flagellar basal-body rod protein C [Vibrio mimicus VM573] gi|261890710|gb|EEY36697.1| flagellar basal-body rod protein FlgC [Vibrio mimicus MB-451] Length = 144 Score = 39.9 bits (91), Expect = 0.32, Method: Composition-based stats. Identities = 6/42 (14%), Positives = 18/42 (42%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ + + + EM M+ T+ F + ++ + + Sbjct: 97 GYVYYPDIDVVAEMADMMSATRSFETNVEVLSNVKSMQQGLL 138 Score = 36.8 bits (83), Expect = 2.8, Method: Composition-based stats. Identities = 19/99 (19%), Positives = 34/99 (34%), Gaps = 6/99 (6%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKISFVA 60 I +A A RL+TVA N++N D V ++ +K F+ V + A Sbjct: 9 IAGSAMTAQTVRLNTVASNLANADAVSANSDDAYKALKPVFATVYNKTQMAASDSAYPSA 68 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 + + E + L D + ++ Sbjct: 69 EVRVMDVVQNAGQAEKRFEPNNPLANDEGYVYYPDIDVV 107 >gi|30019783|ref|NP_831414.1| flagellar hook-associated protein FlgK [Bacillus cereus ATCC 14579] gi|229127064|ref|ZP_04256063.1| Flagellar hook-associated protein FlgK [Bacillus cereus BDRD-Cer4] gi|29895328|gb|AAP08615.1| Flagellar hook-associated protein 1 [Bacillus cereus ATCC 14579] gi|228656417|gb|EEL12256.1| Flagellar hook-associated protein FlgK [Bacillus cereus BDRD-Cer4] Length = 432 Score = 39.9 bits (91), Expect = 0.32, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 32/101 (31%), Gaps = 6/101 (5%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65 N L+ LA + L T N+SN T G+ V + G K ++ Sbjct: 7 NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYESA-GGSKGYAPEQRIGYGVQTLG 65 Query: 66 LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106 + + + + + F+ + L+R Sbjct: 66 VDRITDEVKTKQYN-----DQMSQFSYYAYMNSTLSRVESM 101 Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 5/34 (14%), Positives = 11/34 (32%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 N EM ++ + F + + I + Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427 >gi|85710170|ref|ZP_01041235.1| flagellar hook-associated protein 1 [Erythrobacter sp. NAP1] gi|85688880|gb|EAQ28884.1| flagellar hook-associated protein 1 [Erythrobacter sp. NAP1] Length = 452 Score = 39.9 bits (91), Expect = 0.32, Method: Composition-based stats. Identities = 6/35 (17%), Positives = 13/35 (37%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 + E +I L Q F + + +I + + Sbjct: 415 VDLDAEAASLIRLQQAFEANSRVIQVASELFDTIL 449 >gi|229132551|ref|ZP_04261400.1| Flagellar hook-associated protein FlgK [Bacillus cereus BDRD-ST196] gi|228650897|gb|EEL06883.1| Flagellar hook-associated protein FlgK [Bacillus cereus BDRD-ST196] Length = 432 Score = 39.9 bits (91), Expect = 0.33, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 25/53 (47%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 N L+ LA + L T N+SN T G+ V + V + + +Q+I + Sbjct: 7 NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSVGASNGHTPEQRIGY 59 Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 5/34 (14%), Positives = 11/34 (32%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 N EM ++ + F + + I + Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427 >gi|254477691|ref|ZP_05091077.1| flagellar basal-body rod protein; FlgB [Ruegeria sp. R11] gi|214031934|gb|EEB72769.1| flagellar basal-body rod protein; FlgB [Ruegeria sp. R11] Length = 129 Score = 39.9 bits (91), Expect = 0.33, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 22/53 (41%), Gaps = 1/53 (1%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIKNDID 53 F I + +R + VA N++N DT G+ +K F EV D Sbjct: 5 LNVFKIAYSMATHAGKRQALVAQNIANADTPGYNAKDIKPFKEVYEQRARPGD 57 >gi|217976222|ref|YP_002360369.1| flagellar basal body rod protein FlgB [Methylocella silvestris BL2] gi|217501598|gb|ACK49007.1| flagellar basal body rod protein FlgB [Methylocella silvestris BL2] Length = 126 Score = 39.9 bits (91), Expect = 0.33, Method: Composition-based stats. Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 3/40 (7%) Query: 9 LAAQLA--LEQRLSTVADNMSNTDTVGFRTIKVK-FSEVV 45 L++Q A L R S +A N++N +T GF V F +V Sbjct: 9 LSSQQARWLTVRQSVIAANVANANTPGFTASDVTPFEDVF 48 >gi|218896670|ref|YP_002445081.1| flagellar hook-associated protein FlgK [Bacillus cereus G9842] gi|228900319|ref|ZP_04064549.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis IBL 4222] gi|218546008|gb|ACK98402.1| flagellar hook-associated protein FlgK [Bacillus cereus G9842] gi|228859354|gb|EEN03784.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis IBL 4222] Length = 432 Score = 39.9 bits (91), Expect = 0.33, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 25/53 (47%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 N L+ LA + L T N+SN T G+ V + V + + +Q+I + Sbjct: 7 NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSVGASNGHTPEQRIGY 59 Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 5/34 (14%), Positives = 11/34 (32%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 N EM ++ + F + + I + Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427 >gi|149191150|ref|ZP_01869408.1| flagellar basal body rod protein [Vibrio shilonii AK1] gi|148834988|gb|EDL51967.1| flagellar basal body rod protein [Vibrio shilonii AK1] Length = 115 Score = 39.9 bits (91), Expect = 0.33, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 3/51 (5%) Query: 16 EQRLS---TVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + RL ++ N++N DT ++ + +KF V+ I N D I A + Sbjct: 16 QFRLDRAAVLSSNIANVDTPNYKAMDLKFDAVLSGIGNSKDWYIDTSAQYR 66 >gi|228907371|ref|ZP_04071229.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis IBL 200] gi|228852232|gb|EEM97028.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis IBL 200] Length = 432 Score = 39.9 bits (91), Expect = 0.33, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 25/53 (47%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 N L+ LA + L T N+SN T G+ V + V + + +Q+I + Sbjct: 7 NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSVGASNGHTPEQRIGY 59 Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 5/34 (14%), Positives = 11/34 (32%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 N EM ++ + F + + I + Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427 >gi|229144350|ref|ZP_04272756.1| Flagellar hook-associated protein FlgK [Bacillus cereus BDRD-ST24] gi|296502338|ref|YP_003664038.1| flagellar hook-associated protein FlgK [Bacillus thuringiensis BMB171] gi|228639137|gb|EEK95561.1| Flagellar hook-associated protein FlgK [Bacillus cereus BDRD-ST24] gi|296323390|gb|ADH06318.1| flagellar hook-associated protein FlgK [Bacillus thuringiensis BMB171] Length = 432 Score = 39.9 bits (91), Expect = 0.33, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 32/101 (31%), Gaps = 6/101 (5%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65 N L+ LA + L T N+SN T G+ V + G K ++ Sbjct: 7 NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYESA-GGSKGYAPEQRIGYGVQTLG 65 Query: 66 LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106 + + + + + F+ + L+R Sbjct: 66 VDRITDEVKTKQYN-----DQMSQFSYYAYMNSTLSRVESM 101 Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 5/34 (14%), Positives = 11/34 (32%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 N EM ++ + F + + I + Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427 >gi|208435439|ref|YP_002267105.1| flagellar basal-body rod protein [Helicobacter pylori G27] gi|208433368|gb|ACI28239.1| flagellar basal-body rod protein [Helicobacter pylori G27] Length = 140 Score = 39.9 bits (91), Expect = 0.33, Method: Composition-based stats. Identities = 11/37 (29%), Positives = 18/37 (48%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 R +A N++N DT +R + F V+ K +I Sbjct: 18 SLRQDMIASNIANVDTPFYRPKDLDFESVLAEKKAEI 54 >gi|254251188|ref|ZP_04944506.1| Flagellar basal body protein [Burkholderia dolosa AUO158] gi|124893797|gb|EAY67677.1| Flagellar basal body protein [Burkholderia dolosa AUO158] Length = 173 Score = 39.9 bits (91), Expect = 0.33, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 18/43 (41%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 A R ++ N++N DT G+R V F+ + + Sbjct: 25 ALDVRAYRQELLSSNIANADTPGYRARDVDFASTLARSLKQAN 67 >gi|108563933|ref|YP_628249.1| flagellar basal body rod protein FlgB [Helicobacter pylori HPAG1] gi|107837706|gb|ABF85575.1| flagellar basal-body rod protein [Helicobacter pylori HPAG1] Length = 140 Score = 39.9 bits (91), Expect = 0.33, Method: Composition-based stats. Identities = 9/29 (31%), Positives = 15/29 (51%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVG 46 R +A N++N DT +R + F V+ Sbjct: 20 RQDMIASNIANVDTPFYRPKDLDFESVLA 48 >gi|255601427|ref|XP_002537672.1| Flagellar hook-associated protein, putative [Ricinus communis] gi|223515502|gb|EEF24710.1| Flagellar hook-associated protein, putative [Ricinus communis] Length = 274 Score = 39.9 bits (91), Expect = 0.33, Method: Composition-based stats. Identities = 10/73 (13%), Positives = 24/73 (32%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + N L+ +A + LS + N++N T G+ + + + V + Sbjct: 1 MSILNNALSGAIASQLALSASSQNIANLQTKGYTRQGALLTALAPSTGAKEAGNGVSVTA 60 Query: 62 GKEYLSKEVGSFI 74 + + Sbjct: 61 LMRFSDSYKTQQM 73 >gi|163856441|ref|YP_001630739.1| flagellar hook-associated protein FlgK [Bordetella petrii DSM 12804] gi|163260169|emb|CAP42471.1| flagellar hook-associated protein 1 [Bordetella petrii] Length = 549 Score = 39.9 bits (91), Expect = 0.33, Method: Composition-based stats. Identities = 9/68 (13%), Positives = 22/68 (32%), Gaps = 1/68 (1%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 +N+ L A + + + N++N G+ ++ + GA + V Sbjct: 1 MNLYNLALTGLNASQAGMEVTSHNINNAANAGYSRQRLV-TSTAGATETGQGFFGRGVQV 59 Query: 62 GKEYLSKE 69 + Sbjct: 60 DTVKRQYD 67 >gi|149188063|ref|ZP_01866358.1| flagellar basal-body rod protein B [Vibrio shilonii AK1] gi|148838051|gb|EDL54993.1| flagellar basal-body rod protein B [Vibrio shilonii AK1] Length = 131 Score = 39.9 bits (91), Expect = 0.33, Method: Composition-based stats. Identities = 6/38 (15%), Positives = 18/38 (47%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 E+ ++ N++ +T G++ ++F + A + Sbjct: 20 EKNAEVISTNIAQANTPGYKAKGMEFDRALKAASSGAS 57 >gi|90422393|ref|YP_530763.1| flagellar hook-associated protein [Rhodopseudomonas palustris BisB18] gi|90104407|gb|ABD86444.1| Flagellar hook-associated protein [Rhodopseudomonas palustris BisB18] Length = 588 Score = 39.9 bits (91), Expect = 0.33, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 22/47 (46%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 I +++ + + ++S + N+SN DT G+ + VV A Sbjct: 9 IAVSSLMNTQVQISVTSSNISNADTTGYTVKTANQAAVVNAGTGAGT 55 >gi|258625236|ref|ZP_05720148.1| Flagellar basal-body rod protein C [Vibrio mimicus VM603] gi|258582483|gb|EEW07320.1| Flagellar basal-body rod protein C [Vibrio mimicus VM603] Length = 144 Score = 39.9 bits (91), Expect = 0.34, Method: Composition-based stats. Identities = 6/42 (14%), Positives = 18/42 (42%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ + + + EM M+ T+ F + ++ + + Sbjct: 97 GYVYYPDIDVVAEMADMMSATRSFETNVEMLSNVKSMQQGLL 138 Score = 36.4 bits (82), Expect = 3.9, Method: Composition-based stats. Identities = 19/99 (19%), Positives = 34/99 (34%), Gaps = 6/99 (6%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKISFVA 60 I +A A RL+TVA N++N D V ++ +K F+ V + A Sbjct: 9 IAGSAMTAQTVRLNTVASNLANADAVSANSDDAYKALKPVFATVYNKTQMAASDSAYPSA 68 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 + + E + L D + ++ Sbjct: 69 EVRVMDVVQNAGQAEKRFEPNNPLANDEGYVYYPDIDVV 107 >gi|206970814|ref|ZP_03231766.1| putative flagellar hook-associated protein [Bacillus cereus AH1134] gi|206734450|gb|EDZ51620.1| putative flagellar hook-associated protein [Bacillus cereus AH1134] Length = 432 Score = 39.9 bits (91), Expect = 0.34, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 25/53 (47%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 N L+ LA + L T N+SN T G+ V + V + + +Q+I + Sbjct: 7 NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSVGASNGHTPEQRIGY 59 Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 5/34 (14%), Positives = 11/34 (32%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 N EM ++ + F + + I + Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427 >gi|220927553|ref|YP_002504462.1| flagellar hook-associated protein FlgK [Clostridium cellulolyticum H10] gi|219997881|gb|ACL74482.1| flagellar hook-associated protein FlgK [Clostridium cellulolyticum H10] Length = 708 Score = 39.9 bits (91), Expect = 0.34, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 22/75 (29%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 +S+ I + E+ L N+SN T GF + + + K+ G Sbjct: 6 SSYEIARSGLKVSERGLFVTGHNLSNVHTPGFTRQQAIIETNPYITQYGKNGKLFQYGLG 65 Query: 63 KEYLSKEVGSFISTG 77 + Sbjct: 66 ADIQETRQIRHTFLD 80 Score = 39.5 bits (90), Expect = 0.39, Method: Composition-based stats. Identities = 6/41 (14%), Positives = 18/41 (43%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S + EM M+ +++ + +++ + M I ++ Sbjct: 664 SGVSMDEEMSNMMKYKFAYDASSRVLNIMDSMMETIITSLG 704 >gi|238796901|ref|ZP_04640405.1| Flagellar basal-body rod protein flgB [Yersinia mollaretii ATCC 43969] gi|238719161|gb|EEQ10973.1| Flagellar basal-body rod protein flgB [Yersinia mollaretii ATCC 43969] Length = 137 Score = 39.9 bits (91), Expect = 0.34, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 20/45 (44%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK 55 A L QR +A N++N DT G+ + FS+ + + Sbjct: 15 ALSLLTQRQDILASNIANVDTPGYLARDMDFSQQLKNAVDRSAPD 59 >gi|319944138|ref|ZP_08018416.1| flagellar basal-body rod protein FlgB [Lautropia mirabilis ATCC 51599] gi|319742632|gb|EFV95041.1| flagellar basal-body rod protein FlgB [Lautropia mirabilis ATCC 51599] Length = 154 Score = 39.9 bits (91), Expect = 0.34, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 15/40 (37%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50 A R T+A N++N DT F+ F + Sbjct: 17 ALQLRASRQETIASNIANADTPNFKAKDFDFGAALREASG 56 >gi|317010251|gb|ADU80831.1| flagellar basal body rod protein FlgB [Helicobacter pylori India7] Length = 140 Score = 39.9 bits (91), Expect = 0.34, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 18/35 (51%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 R +A N++N DT +R + F V+ K +I Sbjct: 20 RQDMIASNIANVDTPFYRPRDLDFESVLAEKKAEI 54 >gi|228938852|ref|ZP_04101452.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228971733|ref|ZP_04132354.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228978342|ref|ZP_04138719.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis Bt407] gi|228781359|gb|EEM29560.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis Bt407] gi|228787823|gb|EEM35781.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228820701|gb|EEM66726.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326939352|gb|AEA15248.1| flagellar hook-associated protein FlgK [Bacillus thuringiensis serovar chinensis CT-43] Length = 432 Score = 39.9 bits (91), Expect = 0.34, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 25/53 (47%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 N L+ LA + L T N+SN T G+ V + V + + +Q+I + Sbjct: 7 NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSVGASNGHTPEQRIGY 59 Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 5/34 (14%), Positives = 11/34 (32%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 N EM ++ + F + + I + Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427 >gi|152965614|ref|YP_001361398.1| hypothetical protein Krad_1648 [Kineococcus radiotolerans SRS30216] gi|151360131|gb|ABS03134.1| protein of unknown function DUF1078 domain protein [Kineococcus radiotolerans SRS30216] Length = 131 Score = 39.9 bits (91), Expect = 0.34, Method: Composition-based stats. Identities = 4/43 (9%), Positives = 20/43 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G+++ + + +M ++ + + + I +++ A++ Sbjct: 85 GYVKYPDIDMSSQMTSLMMAQRAYQANLQTITSAKEAYSAALQ 127 Score = 37.2 bits (84), Expect = 2.0, Method: Composition-based stats. Identities = 11/103 (10%), Positives = 27/103 (26%), Gaps = 6/103 (5%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKIS 57 + I + + V+DN++N +T F V +E + ++ Sbjct: 6 AIGIAGTGVTVNRKWMDAVSDNLANINTATRTDEDAFAARYVVAAEAADGKGTQVAGIVT 65 Query: 58 FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL 100 G+ + G ++ + Sbjct: 66 GSTEGRMVHEPDNPLADENGYVKYPDIDMSSQMTSLMMAQRAY 108 >gi|327478806|gb|AEA82116.1| flagellar basal-body rod protein FlgB [Pseudomonas stutzeri DSM 4166] Length = 104 Score = 39.9 bits (91), Expect = 0.35, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 33/86 (38%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIS 75 QR +A N++N DT GF+ + F + + + ++S S L + Sbjct: 3 MQRSEILAANLANEDTPGFQARDIDFGAEMQRLDDGASSRLSIAGSDPRMLYRVPTQASQ 62 Query: 76 TGTELDFALEGDAWFALESPRGIILT 101 G ++ ++E + LT Sbjct: 63 DGNTVELSVEQAQFSRNSMDFQTSLT 88 >gi|182680551|ref|YP_001834697.1| flagellar basal body rod protein FlgB [Beijerinckia indica subsp. indica ATCC 9039] gi|182636434|gb|ACB97208.1| flagellar basal body rod protein FlgB [Beijerinckia indica subsp. indica ATCC 9039] Length = 126 Score = 39.9 bits (91), Expect = 0.35, Method: Composition-based stats. Identities = 11/64 (17%), Positives = 23/64 (35%), Gaps = 1/64 (1%) Query: 18 RLSTVADNMSNTDTVGFRT-IKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76 R +T+A N++ +T GF++ + F +V + + + Sbjct: 20 RQATIAQNIAQANTPGFKSVDLLPFEQVYSESGLRMTATSPKHLAADPNEADLTAGHTEA 79 Query: 77 GTEL 80 G E Sbjct: 80 GWET 83 >gi|207108518|ref|ZP_03242680.1| flagellar hook-associated protein FlgK [Helicobacter pylori HPKX_438_CA4C1] Length = 267 Score = 39.9 bits (91), Expect = 0.35, Method: Composition-based stats. Identities = 6/29 (20%), Positives = 11/29 (37%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTD 30 +S N A + + +N+SN Sbjct: 5 LSSLNTSYTGLQAHQSMVDVTGNNISNAS 33 >gi|163735544|ref|ZP_02142976.1| flagellar hook-associated protein K [Roseobacter litoralis Och 149] gi|161391164|gb|EDQ15501.1| flagellar hook-associated protein K [Roseobacter litoralis Och 149] Length = 481 Score = 39.9 bits (91), Expect = 0.35, Method: Composition-based stats. Identities = 5/31 (16%), Positives = 14/31 (45%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGF 34 + + + A + ++ N++N T G+ Sbjct: 6 ALSNAMTGLRAAGRTSEVISANLANAMTPGY 36 Score = 39.1 bits (89), Expect = 0.59, Method: Composition-based stats. Identities = 6/36 (16%), Positives = 19/36 (52%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +S E+ +++ + Q + + +I+ ++ M +R Sbjct: 445 VDSDQELQRLLIVEQAYAANVRMIEAADEMMQTILR 480 >gi|228964720|ref|ZP_04125827.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis serovar sotto str. T04001] gi|228794970|gb|EEM42469.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis serovar sotto str. T04001] Length = 287 Score = 39.9 bits (91), Expect = 0.35, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 25/53 (47%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 N L+ LA + L T N+SN T G+ V + V + + +Q+I + Sbjct: 7 NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSVGASNGHTPEQRIGY 59 >gi|148980305|ref|ZP_01815992.1| flagellar basal-body rod protein B [Vibrionales bacterium SWAT-3] gi|145961324|gb|EDK26634.1| flagellar basal-body rod protein B [Vibrionales bacterium SWAT-3] Length = 115 Score = 39.9 bits (91), Expect = 0.35, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 25/51 (49%), Gaps = 3/51 (5%) Query: 16 EQRLS---TVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + RL ++ N++N DT ++ + ++F V+ I + D I A + Sbjct: 16 QFRLDRAAVLSSNIANVDTPNYKAMDLRFEAVLSGIGHSKDWYIGTAAQYR 66 >gi|83716869|ref|YP_438395.1| flagellar hook-associated protein FlgK [Burkholderia thailandensis E264] gi|167614843|ref|ZP_02383478.1| flagellar hook-associated protein FlgK [Burkholderia thailandensis Bt4] gi|257141428|ref|ZP_05589690.1| flagellar hook-associated protein FlgK [Burkholderia thailandensis E264] gi|83650694|gb|ABC34758.1| flagellar hook-associated protein 1, putative [Burkholderia thailandensis E264] Length = 452 Score = 39.9 bits (91), Expect = 0.35, Method: Composition-based stats. Identities = 23/195 (11%), Positives = 50/195 (25%), Gaps = 1/195 (0%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 IG++ A Q L + N +N T G+ V S + + + S Sbjct: 1 MNIIYIGMSGIRAANQSLLAASQNTANIATGGYSRRGVLLSTGLTGGVDASG-LLRLNES 59 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 K + + +P + G+L +ASG Sbjct: 60 YKTQQLWQTAGQYGRYDAAQTYFDQLEALFGGNPVDGKTKANDLGFGKFIGALEAASGNP 119 Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 + + I + ++ + + I + +V+ G + Sbjct: 120 GDSVLRNGVIDAANSMTKQFNNMRSVLTNQLRSIEQQRVTTVEQVNGLAKTVAELNGKIA 179 Query: 182 PPTPLEDLSGVTVKR 196 + + Sbjct: 180 AGQASGADVSALMDQ 194 >gi|15646166|ref|NP_208350.1| flagellar basal body rod protein FlgB [Helicobacter pylori 26695] gi|217031712|ref|ZP_03437216.1| hypothetical protein HPB128_155g25 [Helicobacter pylori B128] gi|298737152|ref|YP_003729682.1| flagellar basal-body rod protein FlgB [Helicobacter pylori B8] gi|2314742|gb|AAD08599.1| flagellar basal-body rod protein (flgB) [Helicobacter pylori 26695] gi|216946559|gb|EEC25159.1| hypothetical protein HPB128_155g25 [Helicobacter pylori B128] gi|298356346|emb|CBI67218.1| flagellar basal-body rod protein FlgB [Helicobacter pylori B8] Length = 140 Score = 39.9 bits (91), Expect = 0.35, Method: Composition-based stats. Identities = 9/31 (29%), Positives = 15/31 (48%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46 R +A N++N DT +R + F V+ Sbjct: 18 SLRQDMIASNIANVDTPFYRPKDLDFESVLA 48 >gi|299131803|ref|ZP_07024998.1| flagellar hook-associated protein FlgK [Afipia sp. 1NLS2] gi|298591940|gb|EFI52140.1| flagellar hook-associated protein FlgK [Afipia sp. 1NLS2] Length = 610 Score = 39.9 bits (91), Expect = 0.36, Method: Composition-based stats. Identities = 10/122 (8%), Positives = 32/122 (26%) Query: 120 KYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISP 179 + + + G + Q F + S Sbjct: 489 GSGTQSGDTTRSDFILSQLTNSSYYVSPQTGIGSNATPFKGTMLSFLQQFTTMQGQAASS 548 Query: 180 NIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +++ T++ S N EM ++ L +++ ++ + ++ Sbjct: 549 AQQLADGQNVVLSTLQNKLNSSSGVNIDDEMAHLLALQNAYSANARVMSTVKDMFDSLLQ 608 Query: 240 NI 241 ++ Sbjct: 609 SV 610 Score = 36.8 bits (83), Expect = 2.6, Method: Composition-based stats. Identities = 9/32 (28%), Positives = 17/32 (53%) Query: 9 LAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 ++ A + LS V+ N++N +T G+ V Sbjct: 1 MSGLRANQAALSLVSSNVANIETPGYVRKTVN 32 >gi|292487936|ref|YP_003530811.1| flagellar basal-body rod protein FlgB [Erwinia amylovora CFBP1430] gi|292899155|ref|YP_003538524.1| flagellar basal-body rod protein FlgB [Erwinia amylovora ATCC 49946] gi|291199003|emb|CBJ46114.1| flagellar basal-body rod protein FlgB [Erwinia amylovora ATCC 49946] gi|291553358|emb|CBA20403.1| Flagellar basal-body rod protein flgB [Erwinia amylovora CFBP1430] gi|312172057|emb|CBX80314.1| Flagellar basal-body rod protein flgB [Erwinia amylovora ATCC BAA-2158] Length = 137 Score = 39.9 bits (91), Expect = 0.36, Method: Composition-based stats. Identities = 11/64 (17%), Positives = 22/64 (34%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR +A N++N DT G++ + F+ + + S ++ Sbjct: 15 ALNLRAQRQEILASNIANADTPGYQARDIDFASQLTKAVEHGRAQGSAMSLAVTSARHIP 74 Query: 71 GSFI 74 Sbjct: 75 AETQ 78 >gi|241761145|ref|ZP_04759234.1| flagellar hook-associated protein FlgK [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241374764|gb|EER64225.1| flagellar hook-associated protein FlgK [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 458 Score = 39.9 bits (91), Expect = 0.36, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 17/40 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 M IG + L + + + +N+SN T G+ V Sbjct: 1 MSDILQIGASGVLNYGKAIDVIGENVSNASTTGYARRDVS 40 >gi|56551501|ref|YP_162340.1| flagellar hook-associated protein FlgK [Zymomonas mobilis subsp. mobilis ZM4] gi|56543075|gb|AAV89229.1| flagellar hook-associated protein FlgK [Zymomonas mobilis subsp. mobilis ZM4] Length = 458 Score = 39.9 bits (91), Expect = 0.36, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 17/40 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 M IG + L + + + +N+SN T G+ V Sbjct: 1 MSDILQIGASGVLNYGKAIDVIGENVSNASTTGYARRDVS 40 >gi|260752892|ref|YP_003225785.1| flagellar hook-associated protein FlgK [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258552255|gb|ACV75201.1| flagellar hook-associated protein FlgK [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 458 Score = 39.9 bits (91), Expect = 0.37, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 17/40 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 M IG + L + + + +N+SN T G+ V Sbjct: 1 MSDILQIGASGVLNYGKAIDVIGENVSNASTTGYARRDVS 40 >gi|323178488|gb|EFZ64066.1| flagella basal body rod family protein [Escherichia coli 1180] Length = 218 Score = 39.5 bits (90), Expect = 0.37, Method: Composition-based stats. Identities = 13/77 (16%), Positives = 22/77 (28%), Gaps = 1/77 (1%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 NIG + + L+ A N +N T G+ + S + GA + + V Sbjct: 1 MDMINIGYSGASTAQVELNVTAQNTANAMTTGYTRQVAEISTI-GASGGSPNSAGNGVQV 59 Query: 62 GKEYLSKEVGSFISTGT 78 Sbjct: 60 DSIRRVSNQYQVNQVWY 76 >gi|168180910|ref|ZP_02615574.1| flagellar basal-body rod protein FlgB [Clostridium botulinum NCTC 2916] gi|170758458|ref|YP_001787985.1| flagellar basal body rod protein FlgB [Clostridium botulinum A3 str. Loch Maree] gi|169405447|gb|ACA53858.1| flagellar basal-body rod protein FlgB [Clostridium botulinum A3 str. Loch Maree] gi|182668259|gb|EDT80238.1| flagellar basal-body rod protein FlgB [Clostridium botulinum NCTC 2916] gi|322806997|emb|CBZ04567.1| flagellar basal-body rod protein FlgB [Clostridium botulinum H04402 065] Length = 133 Score = 39.5 bits (90), Expect = 0.37, Method: Composition-based stats. Identities = 11/58 (18%), Positives = 27/58 (46%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSK 68 + A R +++N++N +T ++ V F E + N+I+ K++ + + Sbjct: 19 SMDASSYRGKVISNNIANYNTPDYKRHYVTFEETLKDNLNNINMKVTAEKHMNDGVEF 76 >gi|192289145|ref|YP_001989750.1| flagellar hook-associated protein FlgK [Rhodopseudomonas palustris TIE-1] gi|192282894|gb|ACE99274.1| flagellar hook-associated protein FlgK [Rhodopseudomonas palustris TIE-1] Length = 587 Score = 39.5 bits (90), Expect = 0.37, Method: Composition-based stats. Identities = 9/33 (27%), Positives = 16/33 (48%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39 I + A + ++S + N+SN DT G+ Sbjct: 9 IAFSGLAATQVQISVTSANISNADTTGYTKKTA 41 >gi|116327146|ref|YP_796866.1| flagellar basal body rod protein FlgB [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116332197|ref|YP_801915.1| flagellar basal body rod protein FlgB [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116119890|gb|ABJ77933.1| Endoflagellar proximal basal body rod protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116125886|gb|ABJ77157.1| Endoflagellar proximal basal body rod protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 143 Score = 39.5 bits (90), Expect = 0.37, Method: Composition-based stats. Identities = 7/41 (17%), Positives = 16/41 (39%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51 + ++DN++N D F+ +V F ++ Sbjct: 17 GMNNSILKRKVISDNIANADVPHFKRSEVIFESMIKRAIES 57 >gi|21672601|ref|NP_660668.1| flagellar basal-body rod protein FlgB [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|25008459|sp|Q8K9K9|FLGB_BUCAP RecName: Full=Flagellar basal-body rod protein flgB gi|21623232|gb|AAM67879.1| flagellar basal-body rod protein FlgB [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 133 Score = 39.5 bits (90), Expect = 0.37, Method: Composition-based stats. Identities = 8/54 (14%), Positives = 23/54 (42%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65 +R ++ N++N DT ++ + + F + + I + I+ + + Sbjct: 16 LNLYAKRQEILSSNIANADTPNYKAMDINFKDEMDKITKKSNLDITLTKTSSHH 69 >gi|300854205|ref|YP_003779189.1| flagellar basal body protein FlgB [Clostridium ljungdahlii DSM 13528] gi|300434320|gb|ADK14087.1| flagellar basal body protein FlgB [Clostridium ljungdahlii DSM 13528] Length = 133 Score = 39.5 bits (90), Expect = 0.37, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 28/75 (37%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65 + A E R ++ N+SN +T G++ V F E + ++++ K K Sbjct: 14 YLLARGLDAAEARSQAISSNISNINTAGYKRKYVTFEENLKNSVDNLELKTDDAKHIKMG 73 Query: 66 LSKEVGSFISTGTEL 80 + + + Sbjct: 74 NDYGAITTNTDSSTS 88 >gi|292670031|ref|ZP_06603457.1| flagellar hook-associated protein [Selenomonas noxia ATCC 43541] gi|292648332|gb|EFF66304.1| flagellar hook-associated protein [Selenomonas noxia ATCC 43541] Length = 564 Score = 39.5 bits (90), Expect = 0.37, Method: Composition-based stats. Identities = 4/42 (9%), Positives = 16/42 (38%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S + E+ M+ + + + ++ ++ + I + Sbjct: 519 TSGVDWNEELTNMLKFQTGYGACSRVLTSMDEMLDRLINSTG 560 Score = 36.0 bits (81), Expect = 4.6, Method: Composition-based stats. Identities = 8/70 (11%), Positives = 19/70 (27%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 + L TV N++N T G+ +V + + + + Sbjct: 4 GIQNNQLSLDTVGHNITNASTEGYSRQRVDSAATNYQERPSLYGNVYVGGGVDVVALNRA 63 Query: 71 GSFISTGTEL 80 + + Sbjct: 64 RNVYADKQYW 73 >gi|289612744|emb|CBI60033.1| unnamed protein product [Sordaria macrospora] Length = 90 Score = 39.5 bits (90), Expect = 0.37, Method: Composition-based stats. Identities = 4/36 (11%), Positives = 15/36 (41%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + E+ M+ + + + ++ + + E +R Sbjct: 52 VDEPRELVDMLDAARTYQNNVEVMSTAKSLITETLR 87 >gi|110677962|ref|YP_680969.1| flagellar hook-associated protein FlgK [Roseobacter denitrificans OCh 114] gi|109454078|gb|ABG30283.1| flagellar hook-associated protein FlgK [Roseobacter denitrificans OCh 114] Length = 481 Score = 39.5 bits (90), Expect = 0.37, Method: Composition-based stats. Identities = 5/31 (16%), Positives = 14/31 (45%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGF 34 + + + A + ++ N++N T G+ Sbjct: 6 ALSNAMTGLRAAGRTSEVISANLANAMTPGY 36 Score = 39.5 bits (90), Expect = 0.47, Method: Composition-based stats. Identities = 6/36 (16%), Positives = 19/36 (52%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +S E+ +++ + Q + + +I+ ++ M +R Sbjct: 445 VDSDQELQRLLIVEQAYAANARMIEAADEMMQTILR 480 >gi|299822287|ref|ZP_07054173.1| flagellar basal-body rod protein FlgC [Listeria grayi DSM 20601] gi|299815816|gb|EFI83054.1| flagellar basal-body rod protein FlgC [Listeria grayi DSM 20601] Length = 136 Score = 39.5 bits (90), Expect = 0.37, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 22/42 (52%) Query: 195 KRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLE 236 + G++ +N + EM ++ + + + T+ + NEK + + Sbjct: 88 QDGYVRYANIDLTAEMTNIMVGQKMYAANTSALQANEKMLDK 129 Score = 35.6 bits (80), Expect = 5.4, Method: Composition-based stats. Identities = 8/30 (26%), Positives = 15/30 (50%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTD 30 M S N +A A + + +DN++N + Sbjct: 1 MFESINTNGSALNAAKTWMEISSDNIANAN 30 >gi|114762176|ref|ZP_01441644.1| flagellar hook-associated protein K [Pelagibaca bermudensis HTCC2601] gi|114545200|gb|EAU48203.1| flagellar hook-associated protein K [Roseovarius sp. HTCC2601] Length = 486 Score = 39.5 bits (90), Expect = 0.37, Method: Composition-based stats. Identities = 7/42 (16%), Positives = 20/42 (47%), Gaps = 1/42 (2%) Query: 199 LEDS-NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 LE S ++ E+ +++ + Q + + +I ++ M + Sbjct: 444 LELSKGVDTDAELQELLRIEQHYAANARVITTVDELMQTLMN 485 Score = 35.2 bits (79), Expect = 8.9, Method: Composition-based stats. Identities = 7/31 (22%), Positives = 14/31 (45%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGF 34 + + L+ A + VA N++N T + Sbjct: 6 ALSNALSGLTANSRSAGLVASNIANATTESY 36 >gi|28900120|ref|NP_799775.1| flagellar basal body rod protein FlgC [Vibrio parahaemolyticus RIMD 2210633] gi|153837089|ref|ZP_01989756.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus AQ3810] gi|260365770|ref|ZP_05778266.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus K5030] gi|260880692|ref|ZP_05893047.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus AN-5034] gi|260897702|ref|ZP_05906198.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus Peru-466] gi|260899387|ref|ZP_05907782.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus AQ4037] gi|1272366|gb|AAA97474.1| LfgC [Vibrio parahaemolyticus] gi|28808403|dbj|BAC61608.1| LfgC [Vibrio parahaemolyticus RIMD 2210633] gi|149749677|gb|EDM60422.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus AQ3810] gi|308086219|gb|EFO35914.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus Peru-466] gi|308092577|gb|EFO42272.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus AN-5034] gi|308109204|gb|EFO46744.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus AQ4037] gi|308114992|gb|EFO52532.1| flagellar basal-body rod protein FlgC [Vibrio parahaemolyticus K5030] gi|328470099|gb|EGF41010.1| flagellar basal body rod protein FlgC [Vibrio parahaemolyticus 10329] Length = 144 Score = 39.5 bits (90), Expect = 0.37, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 19/43 (44%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ + + + EM M+ T+ F + ++ + +R Sbjct: 97 GYVYYPDIDVVAEMADMMSATRSFETNVEVLANVKSMQQGLLR 139 >gi|150019083|ref|YP_001311337.1| flagellar basal body rod protein FlgB [Clostridium beijerinckii NCIMB 8052] gi|149905548|gb|ABR36381.1| flagellar basal-body rod protein FlgB [Clostridium beijerinckii NCIMB 8052] Length = 134 Score = 39.5 bits (90), Expect = 0.37, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 19/40 (47%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50 A R T+A+NM+N +T ++ V F E + + Sbjct: 18 GIKASNVRAKTIANNMANVNTKDYKRFNVVFEENLKNQGD 57 >gi|304438222|ref|ZP_07398164.1| flagellar hook-associated protein FlgK [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304368829|gb|EFM22512.1| flagellar hook-associated protein FlgK [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 574 Score = 39.5 bits (90), Expect = 0.38, Method: Composition-based stats. Identities = 4/39 (10%), Positives = 15/39 (38%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 + E+ MI + + + ++ ++ + I + Sbjct: 532 VDWNEELTNMIKFQTGYGACSRVLTSMDEILDRLINSTG 570 Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 8/73 (10%), Positives = 20/73 (27%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 N + + L T N++N T G+ +V + + + + Sbjct: 7 GLNTMVRGIQNNQLSLDTTGHNITNASTEGYSRQRVDSAATNYQERPSLYGNVYVGGGVD 66 Query: 64 EYLSKEVGSFIST 76 + + Sbjct: 67 VVALNRARNIYAD 79 >gi|239817151|ref|YP_002946061.1| flagellar hook-associated protein FlgK [Variovorax paradoxus S110] gi|239803728|gb|ACS20795.1| flagellar hook-associated protein FlgK [Variovorax paradoxus S110] Length = 652 Score = 39.5 bits (90), Expect = 0.38, Method: Composition-based stats. Identities = 15/148 (10%), Positives = 40/148 (27%), Gaps = 3/148 (2%) Query: 91 ALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQ 150 + + T + G V SG D ++ + N G + + Sbjct: 504 NYAAGTAVPYTAGASIRFD--GIEVKLSGAPADGDTFTIGKNAGGVSDGSNALRLGALQR 561 Query: 151 KGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEM 210 K + ++ ++ V + + ++ ++ S N E Sbjct: 562 KTAMDGGTSTFNGAFAK-LVSEVGNRAMEIRVASATQEGVTGQIRASRDSISGVNQDEET 620 Query: 211 GQMIHLTQKFNSITTLIDENEKSMLEAI 238 ++ Q + + +I + Sbjct: 621 ANLLMYQQMYQANAKVIQTASTMFDAIL 648 Score = 38.3 bits (87), Expect = 0.90, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 14/38 (36%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39 + F GL+ L T A N +N T G+ Sbjct: 1 MSMFQTGLSGLSVARSALMTTAHNTANVYTAGYSRQTA 38 >gi|308064341|gb|ADO06228.1| flagellar basal body rod protein FlgB [Helicobacter pylori Sat464] Length = 140 Score = 39.5 bits (90), Expect = 0.38, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 21/48 (43%), Gaps = 2/48 (4%) Query: 1 MQ--TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46 M +F +G A R +A N++N DT +R + F V+ Sbjct: 1 MDFSKAFGLGYKALDYRALRQDMIASNIANVDTPFYRPKDLDFESVLA 48 >gi|308184859|ref|YP_003928992.1| flagellar hook-associated protein FlgK [Helicobacter pylori SJM180] gi|308060779|gb|ADO02675.1| flagellar hook-associated protein FlgK [Helicobacter pylori SJM180] Length = 606 Score = 39.5 bits (90), Expect = 0.38, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 14/37 (37%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S + EM +I + + +I ++ + + Sbjct: 566 SQVSVDEEMLNLIKFQSGYAANAKVISAIDRMIDTLL 602 Score = 38.7 bits (88), Expect = 0.67, Method: Composition-based stats. Identities = 6/29 (20%), Positives = 11/29 (37%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTD 30 +S N A + + +N+SN Sbjct: 5 LSSLNTSYTGLQAHQSMVDVTGNNISNAS 33 >gi|229109195|ref|ZP_04238794.1| Flagellar hook-associated protein FlgK [Bacillus cereus Rock1-15] gi|228674205|gb|EEL29450.1| Flagellar hook-associated protein FlgK [Bacillus cereus Rock1-15] Length = 432 Score = 39.5 bits (90), Expect = 0.38, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 25/53 (47%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 N L+ LA + L T N+SN T G+ V + V + + +Q+I + Sbjct: 7 NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSVGASNGHTPEQRIGY 59 Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats. Identities = 5/34 (14%), Positives = 11/34 (32%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 N EM ++ + F + + I + Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427 >gi|218235346|ref|YP_002366423.1| flagellar hook-associated protein FlgK [Bacillus cereus B4264] gi|229069290|ref|ZP_04202580.1| Flagellar hook-associated protein FlgK [Bacillus cereus F65185] gi|229078920|ref|ZP_04211472.1| Flagellar hook-associated protein FlgK [Bacillus cereus Rock4-2] gi|229178147|ref|ZP_04305518.1| Flagellar hook-associated protein FlgK [Bacillus cereus 172560W] gi|218163303|gb|ACK63295.1| putative flagellar hook-associated protein [Bacillus cereus B4264] gi|228605277|gb|EEK62727.1| Flagellar hook-associated protein FlgK [Bacillus cereus 172560W] gi|228704334|gb|EEL56768.1| Flagellar hook-associated protein FlgK [Bacillus cereus Rock4-2] gi|228713777|gb|EEL65662.1| Flagellar hook-associated protein FlgK [Bacillus cereus F65185] Length = 432 Score = 39.5 bits (90), Expect = 0.38, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 25/53 (47%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 N L+ LA + L T N+SN T G+ V + V + + +Q+I + Sbjct: 7 NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSVGASNGHTPEQRIGY 59 Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats. Identities = 5/34 (14%), Positives = 11/34 (32%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 N EM ++ + F + + I + Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427 >gi|87119670|ref|ZP_01075567.1| Flagellar hook-associated protein [Marinomonas sp. MED121] gi|86165146|gb|EAQ66414.1| Flagellar hook-associated protein [Marinomonas sp. MED121] Length = 659 Score = 39.5 bits (90), Expect = 0.38, Method: Composition-based stats. Identities = 16/101 (15%), Positives = 30/101 (29%), Gaps = 1/101 (0%) Query: 1 MQTSFN-IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFV 59 M IGL+ LA ++ T N +N +T G+ S + K Sbjct: 1 MAGDLYSIGLSGVLASSAQIVTTGQNTANVNTEGYNRQSTNLSTLQNGGVQVGSTKRVVD 60 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIIL 100 + + +F + D F+ ++ Sbjct: 61 EFVNTQMRADTSNFNYFESYYQQGTIADEIFSDKATSLNTY 101 Score = 39.1 bits (89), Expect = 0.51, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 17/43 (39%) Query: 200 EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 E S + E +I + + + +I EKS + ++ Sbjct: 617 EVSAVSLDEEAVNLIRYQNSYAASSQVISAAEKSFQTLLNSLR 659 >gi|57242333|ref|ZP_00370272.1| flagellar basal-body rod protein FlgB [Campylobacter upsaliensis RM3195] gi|57017013|gb|EAL53795.1| flagellar basal-body rod protein FlgB [Campylobacter upsaliensis RM3195] Length = 143 Score = 39.5 bits (90), Expect = 0.38, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 21/49 (42%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 +A R + N++N DT ++ V+F + N+I +K Sbjct: 13 SALAGRNLRNQLINSNLANVDTPFYKARDVEFETALVRRANEIFKKEQG 61 >gi|295690698|ref|YP_003594391.1| flagellar basal-body rod protein FlgC [Caulobacter segnis ATCC 21756] gi|295432601|gb|ADG11773.1| flagellar basal-body rod protein FlgC [Caulobacter segnis ATCC 21756] Length = 139 Score = 39.5 bits (90), Expect = 0.38, Method: Composition-based stats. Identities = 7/34 (20%), Positives = 16/34 (47%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 G+++ N NS+ E M + + + +I+ Sbjct: 93 GYVKLPNVNSLVEALDMKEAQRAYEANLNVIETA 126 Score = 38.7 bits (88), Expect = 0.67, Method: Composition-based stats. Identities = 9/95 (9%), Positives = 25/95 (26%), Gaps = 8/95 (8%) Query: 12 QLALEQRLSTVADNMSNTDTVG-------FRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 A + R+ +A+N++N ++ +R F + Q + + Sbjct: 19 LRAQQGRMRVIAENIANANSTATTAGGDPYRRQLPIFRPTKVQGAEGV-QMVRVDPDQSD 77 Query: 65 YLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 + ++ + L Sbjct: 78 FKTEYDPGNPAADANGYVKLPNVNSLVEALDMKEA 112 >gi|87307389|ref|ZP_01089534.1| flagellar basal-body rod potein FlgC [Blastopirellula marina DSM 3645] gi|87290129|gb|EAQ82018.1| flagellar basal-body rod potein FlgC [Blastopirellula marina DSM 3645] Length = 140 Score = 39.5 bits (90), Expect = 0.38, Method: Composition-based stats. Identities = 5/46 (10%), Positives = 23/46 (50%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 G++ N + +M + ++ + + +++ ++ +++R +A Sbjct: 95 GYVAHPRVNMVEQMVDALEASRAYEANIGVVEISKNLAAQSLRILA 140 Score = 38.3 bits (87), Expect = 0.89, Method: Composition-based stats. Identities = 9/30 (30%), Positives = 16/30 (53%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTD 30 M + +I +A +A RL+ V N++N Sbjct: 1 MNGALDISSSAMVAQRIRLNAVTSNIANMS 30 >gi|258592508|emb|CBE68817.1| putative Flagellar basal-body rod protein flgB [NC10 bacterium 'Dutch sediment'] Length = 120 Score = 39.5 bits (90), Expect = 0.39, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 23/49 (46%) Query: 13 LALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 A R +A N++N DT G+R ++V FSE + + V + Sbjct: 17 RAASLRHQVLARNIANIDTPGYRPMEVDFSEELRLASEAGEPPAMVVRT 65 >gi|152997585|ref|YP_001342420.1| flagellar basal-body rod protein FlgB [Marinomonas sp. MWYL1] gi|150838509|gb|ABR72485.1| flagellar basal-body rod protein FlgB [Marinomonas sp. MWYL1] Length = 130 Score = 39.5 bits (90), Expect = 0.39, Method: Composition-based stats. Identities = 9/73 (12%), Positives = 25/73 (34%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIS 75 R + +A+N++N DT ++ + F + + + + + Sbjct: 20 SARAAVLANNIANADTPNYKARDISFDSFLNNESKKLQLAGTNSRHISGEGFSDEPEGLL 79 Query: 76 TGTELDFALEGDA 88 +L+G+ Sbjct: 80 YRNANQPSLDGNT 92 >gi|39933725|ref|NP_946001.1| flagellar hook-associated protein 1 FlgK [Rhodopseudomonas palustris CGA009] gi|39647572|emb|CAE26092.1| possible flagellar hook-associated protein 1 (HAP1, FlgK protein) [Rhodopseudomonas palustris CGA009] Length = 587 Score = 39.5 bits (90), Expect = 0.39, Method: Composition-based stats. Identities = 9/33 (27%), Positives = 16/33 (48%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39 I + A + ++S + N+SN DT G+ Sbjct: 9 IAFSGLAATQVQISVTSANISNADTTGYTKKTA 41 >gi|83747657|ref|ZP_00944693.1| FlgB [Ralstonia solanacearum UW551] gi|207728343|ref|YP_002256737.1| flagellar basal-body rod protein flgb [Ralstonia solanacearum MolK2] gi|207739740|ref|YP_002258133.1| flagellar basal-body rod protein flgb [Ralstonia solanacearum IPO1609] gi|83725709|gb|EAP72851.1| FlgB [Ralstonia solanacearum UW551] gi|206591589|emb|CAQ57201.1| flagellar basal-body rod protein flgb [Ralstonia solanacearum MolK2] gi|206593122|emb|CAQ60028.1| flagellar basal-body rod protein flgb [Ralstonia solanacearum IPO1609] Length = 153 Score = 39.5 bits (90), Expect = 0.39, Method: Composition-based stats. Identities = 17/121 (14%), Positives = 35/121 (28%), Gaps = 3/121 (2%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR +A N++N DT ++ F + + + Sbjct: 15 ALRLRSQRHQLLASNIANADTPSYKARDFDFQSALQKATGQQSGSSLPMTATAAGHLTAA 74 Query: 71 GSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVP 130 G+ + + +L + T + + DG+ V G+ +V Sbjct: 75 GAAAADVVPMQASLSAQSQADALQGEVEYRT---SQQPSIDGNTVDMDGERMRFADNTVR 131 Query: 131 I 131 Sbjct: 132 Y 132 >gi|149912829|ref|ZP_01901363.1| flagellar basal-body rod protein; FlgB [Roseobacter sp. AzwK-3b] gi|149813235|gb|EDM73061.1| flagellar basal-body rod protein; FlgB [Roseobacter sp. AzwK-3b] Length = 129 Score = 39.5 bits (90), Expect = 0.39, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 1/46 (2%) Query: 17 QRLSTVADNMSNTDTVGF-RTIKVKFSEVVGAIKNDIDQKISFVAS 61 R + +A N++N+DT G+ FS ++G K + V Sbjct: 20 TRQAVIAQNLANSDTPGYAARDVAPFSTLIGTDAPQFTSKATRVTH 65 >gi|294084421|ref|YP_003551179.1| flagellar basal-body rod protein FlgB [Candidatus Puniceispirillum marinum IMCC1322] gi|292663994|gb|ADE39095.1| flagellar basal-body rod protein FlgB [Candidatus Puniceispirillum marinum IMCC1322] Length = 128 Score = 39.5 bits (90), Expect = 0.39, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 27/79 (34%), Gaps = 1/79 (1%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69 AA +R +A N++N T F+ + F + + + A Sbjct: 13 AALSLRSKRNDILASNIANAATPNFKARDINFEDEISRVA-GYGTMDGSDARHIRTAVNG 71 Query: 70 VGSFISTGTELDFALEGDA 88 + L+ +L+G+ Sbjct: 72 RPDQVLYRQPLNPSLDGNT 90 >gi|207091984|ref|ZP_03239771.1| flagellar basal body rod protein FlgB [Helicobacter pylori HPKX_438_AG0C1] Length = 140 Score = 39.5 bits (90), Expect = 0.39, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 18/35 (51%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 R +A N++N DT +R + F V+ K +I Sbjct: 20 RQDMIASNIANVDTPFYRPKDLDFESVLAEKKAEI 54 >gi|152980267|ref|YP_001353108.1| FlgB flagellar basal body protein [Janthinobacterium sp. Marseille] gi|151280344|gb|ABR88754.1| FlgB flagellar basal body protein [Janthinobacterium sp. Marseille] Length = 139 Score = 39.5 bits (90), Expect = 0.39, Method: Composition-based stats. Identities = 11/48 (22%), Positives = 19/48 (39%), Gaps = 3/48 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI 48 M L+ R +A N++N DT F+ V F++ + Sbjct: 8 MLRFQETALS-LRGQ--RQQILASNIANADTPNFKARDVDFNKALQGA 52 >gi|118589965|ref|ZP_01547369.1| flagellar hook-associated protein K [Stappia aggregata IAM 12614] gi|118437462|gb|EAV44099.1| flagellar hook-associated protein K [Stappia aggregata IAM 12614] Length = 454 Score = 39.5 bits (90), Expect = 0.39, Method: Composition-based stats. Identities = 17/137 (12%), Positives = 39/137 (28%), Gaps = 14/137 (10%) Query: 116 SASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS--------- 166 G L + + G G + ++++ +V S Sbjct: 314 DQGGDLDRLRDGGISDPLDPNYNYNPSGAAGFSDRLQELVSAFDKDTVFDSGVELDATDS 373 Query: 167 -QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSN----ANSMYEMGQMIHLTQKFN 221 GF S + + E+ N N EM ++ + + ++ Sbjct: 374 LSGFAASSVSWLEAGRKTMTSNVEVQTVILSRTAENLNNKTGVNIDEEMTLLLEIERSYS 433 Query: 222 SITTLIDENEKSMLEAI 238 + T LI + + + + Sbjct: 434 AATRLISAVDAMLEDLL 450 >gi|296282273|ref|ZP_06860271.1| flagellar hook-associated protein FlgK [Citromicrobium bathyomarinum JL354] Length = 446 Score = 39.5 bits (90), Expect = 0.40, Method: Composition-based stats. Identities = 6/39 (15%), Positives = 11/39 (28%) Query: 200 EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 E S + E +I Q F + + + Sbjct: 404 EQSGVDLDNEAANLIRYQQAFQASGKAMQVASDIFDTLL 442 >gi|218703531|ref|YP_002411050.1| lateral flagellar hook associated FlgK-like protein [Escherichia coli UMN026] gi|293403361|ref|ZP_06647452.1| predicted protein [Escherichia coli FVEC1412] gi|298378972|ref|ZP_06988853.1| flagellar hook-associated protein 1 FlgK [Escherichia coli FVEC1302] gi|300899458|ref|ZP_07117706.1| flagellar hook-associated protein FlgK [Escherichia coli MS 198-1] gi|218430628|emb|CAR11494.1| Lateral flagellar hook associated protein 1 (FlgK-like) [Escherichia coli UMN026] gi|291429214|gb|EFF02234.1| predicted protein [Escherichia coli FVEC1412] gi|298280085|gb|EFI21589.1| flagellar hook-associated protein 1 FlgK [Escherichia coli FVEC1302] gi|300356937|gb|EFJ72807.1| flagellar hook-associated protein FlgK [Escherichia coli MS 198-1] Length = 458 Score = 39.5 bits (90), Expect = 0.40, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 24/78 (30%), Gaps = 2/78 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M NIG + + L+ A N +NT T G+ + S + GA + + V Sbjct: 1 MD-MINIGYSGASTAQVELNVTAQNTANTMTTGYTRQVAEISTI-GASGGSPNSAGNGVQ 58 Query: 61 SGKEYLSKEVGSFISTGT 78 Sbjct: 59 VDSIRRVSNQYQVNQVWY 76 >gi|300693334|ref|YP_003749307.1| flagellar component of cell-proximal portion of basal-body rod, protein flgb [Ralstonia solanacearum PSI07] gi|299075371|emb|CBJ34666.2| flagellar component of cell-proximal portion of basal-body rod, protein flgb [Ralstonia solanacearum PSI07] Length = 175 Score = 39.5 bits (90), Expect = 0.40, Method: Composition-based stats. Identities = 18/121 (14%), Positives = 36/121 (29%), Gaps = 3/121 (2%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR +A N++N DT ++ F + + + Sbjct: 37 ALRLRSQRHQLLASNIANADTPSYKARDFDFQSALQKAVGQQSGSSLPMTATAAGHLTAA 96 Query: 71 GSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVP 130 G+ + T + +L + T + + DG+ V G+ +V Sbjct: 97 GAPAADVTPMQASLSAQSQADALQGEVQYRT---SQQPSIDGNTVDMDGERMRFADNTVR 153 Query: 131 I 131 Sbjct: 154 Y 154 >gi|332674371|gb|AEE71188.1| flagellar basal-body rod protein FlgB [Helicobacter pylori 83] Length = 140 Score = 39.5 bits (90), Expect = 0.40, Method: Composition-based stats. Identities = 9/29 (31%), Positives = 15/29 (51%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVG 46 R +A N++N DT +R + F V+ Sbjct: 20 RQDMIASNIANVDTPFYRPKDLDFESVLA 48 >gi|307638244|gb|ADN80694.1| Flagellar basal-body rod protein [Helicobacter pylori 908] gi|325996837|gb|ADZ52242.1| Flagellar basal-body rod protein [Helicobacter pylori 2018] gi|325998429|gb|ADZ50637.1| Flagellar basal-body rod protein [Helicobacter pylori 2017] Length = 140 Score = 39.5 bits (90), Expect = 0.40, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 18/35 (51%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 R +A N++N DT +R + F V+ K +I Sbjct: 20 RQDMIASNIANVDTPFYRPKDLDFESVLAEKKAEI 54 >gi|188528351|ref|YP_001911038.1| flagellar basal body rod protein FlgB [Helicobacter pylori Shi470] gi|188144591|gb|ACD49008.1| flagellar basal body rod protein FlgB [Helicobacter pylori Shi470] Length = 140 Score = 39.5 bits (90), Expect = 0.40, Method: Composition-based stats. Identities = 9/29 (31%), Positives = 15/29 (51%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVG 46 R +A N++N DT +R + F V+ Sbjct: 20 RQDMIASNIANVDTPFYRPKDLDFESVLA 48 >gi|15612532|ref|NP_224185.1| flagellar basal body rod protein FlgB [Helicobacter pylori J99] gi|4156088|gb|AAD07041.1| FLAGELLAR BASAL-BODY ROD PROTEIN [Helicobacter pylori J99] Length = 140 Score = 39.5 bits (90), Expect = 0.41, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 20/41 (48%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 R +A N++N DT +R + F V+ K +I + S Sbjct: 20 RQDMIASNIANVDTPFYRPKDLDFESVLAEKKAEIFENQSG 60 >gi|264678617|ref|YP_003278524.1| flagellar basal-body rod protein FlgB [Comamonas testosteroni CNB-2] gi|299533500|ref|ZP_07046879.1| flagellar basal-body rod protein FlgB [Comamonas testosteroni S44] gi|262209130|gb|ACY33228.1| flagellar basal-body rod protein FlgB [Comamonas testosteroni CNB-2] gi|298718507|gb|EFI59485.1| flagellar basal-body rod protein FlgB [Comamonas testosteroni S44] Length = 127 Score = 39.5 bits (90), Expect = 0.41, Method: Composition-based stats. Identities = 10/46 (21%), Positives = 21/46 (45%) Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 +R+ +A N++N DT G++ + F + + + S S Sbjct: 16 KRMEVLASNIANADTPGYQAKDIDFKAALEETQRQMLTVQSTNKSH 61 >gi|83646784|ref|YP_435219.1| flagellar basal body protein [Hahella chejuensis KCTC 2396] gi|83634827|gb|ABC30794.1| Flagellar basal body protein [Hahella chejuensis KCTC 2396] Length = 125 Score = 39.5 bits (90), Expect = 0.41, Method: Composition-based stats. Identities = 9/40 (22%), Positives = 20/40 (50%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50 + A + + +A N++N T G+R + + F + I + Sbjct: 15 SLDAAQLQQRLIAQNVANASTEGYRAMSLNFKAALQHIDS 54 >gi|229827760|ref|ZP_04453829.1| hypothetical protein GCWU000182_03152 [Abiotrophia defectiva ATCC 49176] gi|229787959|gb|EEP24073.1| hypothetical protein GCWU000182_03152 [Abiotrophia defectiva ATCC 49176] Length = 618 Score = 39.5 bits (90), Expect = 0.41, Method: Composition-based stats. Identities = 9/37 (24%), Positives = 16/37 (43%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 +IG + L+ A N++N T G+ +V Sbjct: 7 GLDIGTTGLHTYQAALNNTAHNITNAKTEGYSRQQVN 43 >gi|158422261|ref|YP_001523553.1| flagellar basal body rod protein FlgB [Azorhizobium caulinodans ORS 571] gi|158329150|dbj|BAF86635.1| flagellar basal-body rod protein [Azorhizobium caulinodans ORS 571] Length = 169 Score = 39.5 bits (90), Expect = 0.41, Method: Composition-based stats. Identities = 12/67 (17%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Query: 15 LEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIKNDIDQKISFVASGKEYLSKEVGSF 73 R +T+ N++N +T G++ +V+ FS V+ + + ++ + Sbjct: 59 ASVRQATITGNIANANTPGYQAREVEPFSAVMNKTRLSMATTEPGHMGVPFAGAETSKTK 118 Query: 74 ISTGTEL 80 S E+ Sbjct: 119 ESDSWEV 125 >gi|317181262|dbj|BAJ59048.1| flagellar basal body rod protein FlgB [Helicobacter pylori F32] Length = 140 Score = 39.5 bits (90), Expect = 0.42, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 18/35 (51%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 R +A N++N DT +R + F V+ K +I Sbjct: 20 RQDMIASNIANVDTPFYRPKDLDFESVLAEKKAEI 54 >gi|297516687|ref|ZP_06935073.1| flagellar hook-associated protein FlgK [Escherichia coli OP50] Length = 247 Score = 39.5 bits (90), Expect = 0.42, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 21/52 (40%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSNLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|210135738|ref|YP_002302177.1| flagellar basal body rod protein FlgB [Helicobacter pylori P12] gi|210133706|gb|ACJ08697.1| flagellar basal-body rod protein FlgB [Helicobacter pylori P12] gi|317179761|dbj|BAJ57549.1| flagellar basal body rod protein FlgB [Helicobacter pylori F30] Length = 140 Score = 39.5 bits (90), Expect = 0.42, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 18/35 (51%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 R +A N++N DT +R + F V+ K +I Sbjct: 20 RQDMIASNIANVDTPFYRPKDLDFESVLAEKKAEI 54 >gi|148258439|ref|YP_001243024.1| putative flagellar hook-associated protein [Bradyrhizobium sp. BTAi1] gi|146410612|gb|ABQ39118.1| putative flagellar hook-associated protein [Bradyrhizobium sp. BTAi1] Length = 599 Score = 39.5 bits (90), Expect = 0.42, Method: Composition-based stats. Identities = 6/36 (16%), Positives = 15/36 (41%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 N EM ++I L + + ++ + + +R Sbjct: 563 VNIDEEMSRLIALQTAYAANARVLTAAREMIDLLLR 598 Score = 38.3 bits (87), Expect = 0.99, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 18/41 (43%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 +FN A L+ + TV+ N++N+ G+ V Sbjct: 4 NAFNTATAGLQTLQVAIGTVSQNVANSGVAGYTRRVVSTES 44 >gi|154686034|ref|YP_001421195.1| flagellar basal body rod protein FlgB [Bacillus amyloliquefaciens FZB42] gi|154351885|gb|ABS73964.1| FlgB [Bacillus amyloliquefaciens FZB42] Length = 129 Score = 39.5 bits (90), Expect = 0.42, Method: Composition-based stats. Identities = 7/35 (20%), Positives = 19/35 (54%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 + + +N++N DT ++ KV F ++ +++ Sbjct: 21 KQKVLTNNIANIDTPNYKAKKVSFRNLLDQETSNL 55 >gi|33592476|ref|NP_880120.1| flagellar basal body rod protein FlgB [Bordetella pertussis Tohama I] gi|33572122|emb|CAE41664.1| flagellar basal-body rod protein FlgB [Bordetella pertussis Tohama I] gi|332381893|gb|AEE66740.1| flagellar basal body rod protein FlgB [Bordetella pertussis CS] Length = 135 Score = 39.5 bits (90), Expect = 0.42, Method: Composition-based stats. Identities = 8/41 (19%), Positives = 15/41 (36%), Gaps = 2/41 (4%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51 A A R ++ N++N DT ++ F + Sbjct: 17 ALRAQ--RQEVLSSNIANADTPNYKARDFDFKAAMQGALEQ 55 >gi|269965418|ref|ZP_06179537.1| flagellar hook-associated protein 1 [Vibrio alginolyticus 40B] gi|269829897|gb|EEZ84127.1| flagellar hook-associated protein 1 [Vibrio alginolyticus 40B] Length = 646 Score = 39.5 bits (90), Expect = 0.43, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 20/35 (57%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39 N+G + L +++L+T N+SN +T G+ V Sbjct: 6 LNVGTQSVLTAQRQLNTTGHNISNVNTDGYSRQSV 40 Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 5/38 (13%), Positives = 14/38 (36%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S N E M+ Q + + + ++ + ++ Sbjct: 607 SGVNLDEEAANMMKFQQAYMASSRVMQAANDTFNTILQ 644 >gi|288940406|ref|YP_003442646.1| flagellar basal-body rod protein FlgB [Allochromatium vinosum DSM 180] gi|288895778|gb|ADC61614.1| flagellar basal-body rod protein FlgB [Allochromatium vinosum DSM 180] Length = 135 Score = 39.5 bits (90), Expect = 0.43, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 28/54 (51%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK 55 +F + +A L +R +A N++N DT +++ F+EV+ ++ ++ Sbjct: 6 DKAFGVLPSAVLIKARRAELLASNLANVDTPNYKSRDFHFTEVLAEVEGMSNRM 59 >gi|300936123|ref|ZP_07151062.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 21-1] gi|300458701|gb|EFK22194.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 21-1] Length = 143 Score = 39.5 bits (90), Expect = 0.43, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 6/45 (13%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVV 45 I +A A RL+TVA N++N + ++ F+ V Sbjct: 9 ISGSAMTAQTLRLNTVASNLANANAPASSEAQAYKARSPVFAAVY 53 Score = 38.3 bits (87), Expect = 0.92, Method: Composition-based stats. Identities = 4/35 (11%), Positives = 15/35 (42%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 N + +M M+ ++ F + +++ + + Sbjct: 104 VNVVEQMADMMSASRDFETNVDVLNNVKSMQQSLL 138 >gi|114777414|ref|ZP_01452411.1| Flagellar basal-body rod protein FlgB [Mariprofundus ferrooxydans PV-1] gi|114552196|gb|EAU54698.1| Flagellar basal-body rod protein FlgB [Mariprofundus ferrooxydans PV-1] Length = 133 Score = 39.5 bits (90), Expect = 0.44, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 22/42 (52%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51 +A +A E+ +A N++N DT F K FS+ + ++ Sbjct: 13 SALIAREKVQGVLASNIANADTPNFHADKRSFSDFLSELQTG 54 >gi|323975932|gb|EGB71026.1| flagellar basal-body rod protein FlgC [Escherichia coli TW10509] Length = 143 Score = 39.5 bits (90), Expect = 0.44, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 6/45 (13%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVV 45 I +A A RL+TVA N++N + ++ F+ V Sbjct: 9 ISGSAMTAQTLRLNTVASNLANANAPASSEAQAYKARSPVFAAVY 53 Score = 38.3 bits (87), Expect = 0.95, Method: Composition-based stats. Identities = 4/35 (11%), Positives = 15/35 (42%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 N + +M M+ ++ F + +++ + + Sbjct: 104 VNVVEQMADMMSASRDFETNVDVLNNVKSMQQSLL 138 >gi|308183714|ref|YP_003927841.1| flagellar basal body rod protein FlgB [Helicobacter pylori PeCan4] gi|308065899|gb|ADO07791.1| flagellar basal body rod protein FlgB [Helicobacter pylori PeCan4] Length = 140 Score = 39.5 bits (90), Expect = 0.44, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 18/35 (51%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 R +A N++N DT +R + F V+ K +I Sbjct: 20 RQDMIASNIANVDTPFYRPKDLDFESVLAEKKAEI 54 >gi|315585966|gb|ADU40347.1| flagellar basal-body rod protein FlgB [Helicobacter pylori 35A] gi|317178282|dbj|BAJ56071.1| flagellar basal body rod protein FlgB [Helicobacter pylori F16] Length = 140 Score = 39.5 bits (90), Expect = 0.44, Method: Composition-based stats. Identities = 9/29 (31%), Positives = 15/29 (51%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVG 46 R +A N++N DT +R + F V+ Sbjct: 20 RQDMIASNIANVDTPFYRPKDLDFESVLA 48 >gi|283784869|ref|YP_003364734.1| flagellar basal-body rod protein FlgB [Citrobacter rodentium ICC168] gi|282948323|emb|CBG87906.1| flagellar basal-body rod protein FlgB [Citrobacter rodentium ICC168] Length = 138 Score = 39.5 bits (90), Expect = 0.44, Method: Composition-based stats. Identities = 12/66 (18%), Positives = 26/66 (39%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR +A N++N DT G+++ + F+ + + Q+ ++ Sbjct: 15 ALNLRAQRQEILAANIANADTPGYQSRDIDFASELKKVMVRGRQETGGISLALTSAQHIP 74 Query: 71 GSFIST 76 S+ Sbjct: 75 AQAFSS 80 >gi|327254552|gb|EGE66168.1| flagellar basal-body rod protein FlgC [Escherichia coli STEC_7v] Length = 143 Score = 39.5 bits (90), Expect = 0.44, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 6/45 (13%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVV 45 I +A A RL+TVA N++N + ++ F+ V Sbjct: 9 ISGSAMTAQTLRLNTVASNLANANAPAGSEAQAYKARSPVFAAVY 53 Score = 38.3 bits (87), Expect = 0.95, Method: Composition-based stats. Identities = 4/35 (11%), Positives = 15/35 (42%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 N + +M M+ ++ F + +++ + + Sbjct: 104 VNVVEQMADMMSASRDFETNVDVLNNVKSMQQSLL 138 >gi|315638444|ref|ZP_07893621.1| flagellar basal-body rod protein FlgB [Campylobacter upsaliensis JV21] gi|315481435|gb|EFU72062.1| flagellar basal-body rod protein FlgB [Campylobacter upsaliensis JV21] Length = 143 Score = 39.5 bits (90), Expect = 0.44, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 21/49 (42%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 +A R + N++N DT ++ V+F + N+I +K Sbjct: 13 SALAGRNLRNQLINSNLANVDTPFYKARDVEFETALVRRANEIFKKDKG 61 >gi|255030434|ref|ZP_05302385.1| flagellar hook-associated protein FlgK [Listeria monocytogenes LO28] Length = 435 Score = 39.5 bits (90), Expect = 0.44, Method: Composition-based stats. Identities = 7/41 (17%), Positives = 14/41 (34%), Gaps = 2/41 (4%) Query: 198 FLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 LE N EM ++ + + T ++ M + Sbjct: 394 SLEG--VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALL 432 >gi|217033828|ref|ZP_03439253.1| hypothetical protein HP9810_877g32 [Helicobacter pylori 98-10] gi|216943726|gb|EEC23169.1| hypothetical protein HP9810_877g32 [Helicobacter pylori 98-10] gi|297380733|gb|ADI35620.1| flagellar basal-body rod protein FlgB [Helicobacter pylori v225d] gi|308062842|gb|ADO04730.1| flagellar basal body rod protein FlgB [Helicobacter pylori Cuz20] Length = 140 Score = 39.5 bits (90), Expect = 0.44, Method: Composition-based stats. Identities = 9/29 (31%), Positives = 15/29 (51%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVG 46 R +A N++N DT +R + F V+ Sbjct: 20 RQDMIASNIANVDTPFYRPKDLDFESVLA 48 >gi|308273187|emb|CBX29790.1| hypothetical protein N47_F14850 [uncultured Desulfobacterium sp.] Length = 135 Score = 39.5 bits (90), Expect = 0.45, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 33/91 (36%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 FNI A QR +T++ N+SN +T G+R + F + Q + Sbjct: 9 NIFNILENAIGVAYQRQNTISSNISNLETPGYRPKDIDFKAAMAKAIGSESQISLSGTNA 68 Query: 63 KEYLSKEVGSFISTGTELDFALEGDAWFALE 93 + + E + G + +++ Sbjct: 69 GHIDLYNEANQEAEAFEEESDWNGVNYVSID 99 >gi|167626152|ref|YP_001676446.1| flagellar basal body rod protein FlgB [Shewanella halifaxensis HAW-EB4] gi|167356174|gb|ABZ78787.1| flagellar basal-body rod protein FlgB [Shewanella halifaxensis HAW-EB4] Length = 116 Score = 39.5 bits (90), Expect = 0.45, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 26/69 (37%) Query: 21 TVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTEL 80 +A N++N +T G++ + F V+ I + + S+ AS + + Sbjct: 25 MLAGNLANAETPGYKARDLDFKSVMLQINSGMSPDRSYQASYRVPYQTSADQNTVELGKE 84 Query: 81 DFALEGDAW 89 +A Sbjct: 85 QARYSQNAM 93 >gi|317182785|dbj|BAJ60569.1| flagellar basal body rod protein FlgB [Helicobacter pylori F57] Length = 140 Score = 39.5 bits (90), Expect = 0.45, Method: Composition-based stats. Identities = 9/29 (31%), Positives = 15/29 (51%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVG 46 R +A N++N DT +R + F V+ Sbjct: 20 RQDMIASNIANVDTPFYRPKDLDFESVLA 48 >gi|306813306|ref|ZP_07447499.1| flagellar basal body rod protein FlgC [Escherichia coli NC101] gi|305854069|gb|EFM54508.1| flagellar basal body rod protein FlgC [Escherichia coli NC101] Length = 143 Score = 39.5 bits (90), Expect = 0.45, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 6/45 (13%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVV 45 I +A A RL+TVA N++N + ++ F+ V Sbjct: 9 ISGSAMTAQTLRLNTVASNLANANAPASSEAQAYKARSPVFAAVY 53 Score = 38.3 bits (87), Expect = 0.96, Method: Composition-based stats. Identities = 4/35 (11%), Positives = 15/35 (42%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 N + +M M+ ++ F + +++ + + Sbjct: 104 VNVVEQMADMMSASRDFETNVDVLNNVKSMQQSLL 138 >gi|183598614|ref|ZP_02960107.1| hypothetical protein PROSTU_02014 [Providencia stuartii ATCC 25827] gi|188020793|gb|EDU58833.1| hypothetical protein PROSTU_02014 [Providencia stuartii ATCC 25827] Length = 137 Score = 39.5 bits (90), Expect = 0.46, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 25/66 (37%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A E R + +A N++N DT G++ + FS + + K VA Sbjct: 15 ALSIREARQTILAANIANADTPGYQARDIDFSRQLQQAMKNGVVKGKGVALAVTSKGHIE 74 Query: 71 GSFIST 76 G + Sbjct: 75 GRNMKQ 80 >gi|254519425|ref|ZP_05131481.1| flagellar basal-body rod protein FlgB [Clostridium sp. 7_2_43FAA] gi|226913174|gb|EEH98375.1| flagellar basal-body rod protein FlgB [Clostridium sp. 7_2_43FAA] Length = 141 Score = 39.5 bits (90), Expect = 0.46, Method: Composition-based stats. Identities = 11/33 (33%), Positives = 16/33 (48%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 A R +A+NM+N +T F+ V F E Sbjct: 25 GLDASALREKVIANNMANINTKDFKKSYVSFEE 57 >gi|170021362|ref|YP_001726316.1| flagellar basal body rod protein FlgC [Escherichia coli ATCC 8739] gi|170683008|ref|YP_001742371.1| flagellar basal body rod protein FlgC [Escherichia coli SMS-3-5] gi|188492955|ref|ZP_03000225.1| flagellar basal-body rod protein FlgC [Escherichia coli 53638] gi|260853464|ref|YP_003227355.1| putative lateral flagellar component of cell-proximal portion of basal-body rod [Escherichia coli O26:H11 str. 11368] gi|260866411|ref|YP_003232813.1| putative lateral flagellar component of cell-proximal portion of basal-body rod [Escherichia coli O111:H- str. 11128] gi|331645416|ref|ZP_08346520.1| flagellar basal-body rod protein FlgC [Escherichia coli M605] gi|331666544|ref|ZP_08367418.1| flagellar basal-body rod protein FlgC [Escherichia coli TA271] gi|331671802|ref|ZP_08372598.1| flagellar basal-body rod protein FlgC [Escherichia coli TA280] gi|169756290|gb|ACA78989.1| flagellar basal-body rod protein FlgC [Escherichia coli ATCC 8739] gi|170520726|gb|ACB18904.1| lateral flagellar basal-body rod protein LfgC [Escherichia coli SMS-3-5] gi|188488154|gb|EDU63257.1| flagellar basal-body rod protein FlgC [Escherichia coli 53638] gi|257752113|dbj|BAI23615.1| predicted lateral flagellar component of cell-proximal portion of basal-body rod [Escherichia coli O26:H11 str. 11368] gi|257762767|dbj|BAI34262.1| predicted lateral flagellar component of cell-proximal portion of basal-body rod [Escherichia coli O111:H- str. 11128] gi|323158105|gb|EFZ44204.1| flagellar basal-body rod protein FlgC [Escherichia coli EPECa14] gi|323171061|gb|EFZ56710.1| flagellar basal-body rod protein FlgC [Escherichia coli LT-68] gi|323181545|gb|EFZ66965.1| flagellar basal-body rod protein FlgC [Escherichia coli 1357] gi|331045578|gb|EGI17704.1| flagellar basal-body rod protein FlgC [Escherichia coli M605] gi|331065768|gb|EGI37652.1| flagellar basal-body rod protein FlgC [Escherichia coli TA271] gi|331070791|gb|EGI42150.1| flagellar basal-body rod protein FlgC [Escherichia coli TA280] Length = 143 Score = 39.5 bits (90), Expect = 0.47, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 6/45 (13%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVV 45 I +A A RL+TVA N++N + ++ F+ V Sbjct: 9 ISGSAMTAQTLRLNTVASNLANANAPASSEAQAYKARSPVFAAVY 53 Score = 38.3 bits (87), Expect = 1.0, Method: Composition-based stats. Identities = 4/35 (11%), Positives = 15/35 (42%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 N + +M M+ ++ F + +++ + + Sbjct: 104 VNVVEQMADMMSASRDFETNVDVLNNVKSMQQSLL 138 >gi|124268257|ref|YP_001022261.1| flagellar basal body protein [Methylibium petroleiphilum PM1] gi|124261032|gb|ABM96026.1| flagellar basal body protein [Methylibium petroleiphilum PM1] Length = 150 Score = 39.5 bits (90), Expect = 0.47, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 30/80 (37%), Gaps = 3/80 (3%) Query: 1 MQT---SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKIS 57 M S N A L +R +A N++N DT G++ + F + + Sbjct: 18 MDRLTNSLNFQTQALLLRSERQRLIASNIANADTPGYQARDMDFGAALREATGAATPGNA 77 Query: 58 FVASGKEYLSKEVGSFISTG 77 A+ +LS G+ G Sbjct: 78 LSATQAGHLSPTAGARSEAG 97 >gi|229017025|ref|ZP_04173945.1| Flagellar hook-associated protein FlgK [Bacillus cereus AH1273] gi|229023207|ref|ZP_04179718.1| Flagellar hook-associated protein FlgK [Bacillus cereus AH1272] gi|228738132|gb|EEL88617.1| Flagellar hook-associated protein FlgK [Bacillus cereus AH1272] gi|228744296|gb|EEL94378.1| Flagellar hook-associated protein FlgK [Bacillus cereus AH1273] Length = 432 Score = 39.5 bits (90), Expect = 0.47, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 23/53 (43%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 N L+ LA + L T N+SN T G+ V V + + Q+I + Sbjct: 7 NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQAVNLGSVGASNGHTPGQRIGY 59 Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 5/34 (14%), Positives = 11/34 (32%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 N EM ++ + F + + I + Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427 >gi|309390123|gb|ADO78003.1| flagellar hook-associated protein FlgK [Halanaerobium praevalens DSM 2228] Length = 572 Score = 39.5 bits (90), Expect = 0.47, Method: Composition-based stats. Identities = 8/63 (12%), Positives = 18/63 (28%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 + ++GL A + L N++N + + + + S G Sbjct: 6 SGLSVGLRALETQRKSLDVTGHNIANANNEKYNKQRAVHKASYPYTAPGLSNNGSAGQMG 65 Query: 63 KEY 65 Sbjct: 66 TGV 68 Score = 37.2 bits (84), Expect = 2.1, Method: Composition-based stats. Identities = 6/38 (15%), Positives = 16/38 (42%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S + EM +I Q + + I++ ++ + + Sbjct: 533 SGVSLDEEMANLIKYQQSYAAAAKYINKTDQLLETLMT 570 >gi|253990130|ref|YP_003041486.1| flagellar basal body rod protein FlgB [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|211639033|emb|CAR67647.1| flagellar basal-body rod protein flgb (putative proximal rod protein) [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253781580|emb|CAQ84743.1| flagellar basal-body rod protein flgb (putative proximal rod protein) [Photorhabdus asymbiotica] Length = 137 Score = 39.5 bits (90), Expect = 0.48, Method: Composition-based stats. Identities = 8/69 (11%), Positives = 20/69 (28%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A +R ++ N++N DT G++ + F+ + + + Sbjct: 15 ALSLRSRRQEILSANIANADTPGYQARDIDFAAQLKKTIAHGRVTGNGIGLTLTSDRHIP 74 Query: 71 GSFISTGTE 79 Sbjct: 75 IQPQKRMEM 83 >gi|149927795|ref|ZP_01916046.1| flagellar basal-body rod protein FlgB [Limnobacter sp. MED105] gi|149823417|gb|EDM82648.1| flagellar basal-body rod protein FlgB [Limnobacter sp. MED105] Length = 150 Score = 39.5 bits (90), Expect = 0.48, Method: Composition-based stats. Identities = 10/55 (18%), Positives = 19/55 (34%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 + A +R + N+SN DT ++ + F + A + S Sbjct: 8 AMQFSAEALKLRARRQEVLTSNISNVDTPNYKAVDFDFQSALKAATGEKGSMGSP 62 >gi|186477704|ref|YP_001859174.1| flagellar hook-associated protein FlgK [Burkholderia phymatum STM815] gi|184194163|gb|ACC72128.1| flagellar hook-associated protein FlgK [Burkholderia phymatum STM815] Length = 657 Score = 39.5 bits (90), Expect = 0.48, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 26/68 (38%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASG 62 F+IGL+ A + L+T N+SN T G+ + ++E G + Sbjct: 4 NLFSIGLSGLNAAQWGLTTTGQNISNQATPGYSVERPVYAESSGQYTGSGYLGSGVSTTT 63 Query: 63 KEYLSKEV 70 + + Sbjct: 64 VQRQYSQY 71 Score = 36.4 bits (82), Expect = 3.4, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 13/37 (35%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N E ++ Q + + + +I + + Sbjct: 617 SGVNINEEAANLLQYQQLYQANSKVIQTAQTLFQTIL 653 >gi|33596137|ref|NP_883780.1| flagellar basal body rod protein FlgB [Bordetella parapertussis 12822] gi|33601538|ref|NP_889098.1| flagellar basal body rod protein FlgB [Bordetella bronchiseptica RB50] gi|33573140|emb|CAE36787.1| flagellar basal-body rod protein FlgB [Bordetella parapertussis] gi|33575974|emb|CAE33053.1| flagellar basal-body rod protein FlgB [Bordetella bronchiseptica RB50] Length = 135 Score = 39.5 bits (90), Expect = 0.48, Method: Composition-based stats. Identities = 8/41 (19%), Positives = 15/41 (36%), Gaps = 2/41 (4%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51 A A R ++ N++N DT ++ F + Sbjct: 17 ALRAQ--RQEVLSSNIANADTPNYKARDFDFKAAMQGALEQ 55 >gi|289805731|ref|ZP_06536360.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 71 Score = 39.1 bits (89), Expect = 0.49, Method: Composition-based stats. Identities = 9/52 (17%), Positives = 23/52 (44%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+TV++N++N + G+ ++ + Sbjct: 1 MSSLINHAMSGLNAAQAALNTVSNNINNYNVAGYTRQTTILAQANSTLGAGG 52 >gi|256020226|ref|ZP_05434091.1| flagellar basal body rod protein FlgC [Shigella sp. D9] gi|300817272|ref|ZP_07097490.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 107-1] gi|307313521|ref|ZP_07593142.1| flagellar basal-body rod protein FlgC [Escherichia coli W] gi|332281388|ref|ZP_08393801.1| flagellar basal body rod protein FlgC [Shigella sp. D9] gi|300530248|gb|EFK51310.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 107-1] gi|306906689|gb|EFN37200.1| flagellar basal-body rod protein FlgC [Escherichia coli W] gi|315059540|gb|ADT73867.1| flagellar component of cell-proximal portion of basal-body rod [Escherichia coli W] gi|323379901|gb|ADX52169.1| flagellar basal-body rod protein FlgC [Escherichia coli KO11] gi|332103740|gb|EGJ07086.1| flagellar basal body rod protein FlgC [Shigella sp. D9] Length = 143 Score = 39.1 bits (89), Expect = 0.49, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 6/45 (13%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVV 45 I +A A RL+TVA N++N + ++ F+ V Sbjct: 9 ISGSAMTAQTLRLNTVASNLANANAPASSEAQAYKARSPVFAAVY 53 Score = 38.3 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 4/35 (11%), Positives = 15/35 (42%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 N + +M M+ ++ F + +++ + + Sbjct: 104 VNVVEQMADMMSASRDFETNVDVLNNVKSMQQSLL 138 >gi|157371210|ref|YP_001479199.1| flagellar basal body rod protein FlgB [Serratia proteamaculans 568] gi|157322974|gb|ABV42071.1| flagellar basal-body rod protein FlgB [Serratia proteamaculans 568] Length = 137 Score = 39.1 bits (89), Expect = 0.49, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 23/65 (35%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR +A N++N DT G++ + F+ + + S +A Sbjct: 15 ALNLRAQRQEILAANIANADTPGYQARDIDFAGQLNKVLEQGRVSGSGIALNMTSARHIP 74 Query: 71 GSFIS 75 + Sbjct: 75 AQNMQ 79 >gi|90423518|ref|YP_531888.1| flagellar hook-associated protein [Rhodopseudomonas palustris BisB18] gi|90105532|gb|ABD87569.1| Flagellar hook-associated protein [Rhodopseudomonas palustris BisB18] Length = 618 Score = 39.1 bits (89), Expect = 0.49, Method: Composition-based stats. Identities = 9/37 (24%), Positives = 18/37 (48%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 +F+ +A A ++ + V+ N+ N T G+ V Sbjct: 5 AFSTAVAGLEAAQKAIRVVSQNVGNAGTAGYVRRTVT 41 Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats. Identities = 4/32 (12%), Positives = 13/32 (40%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 N EM +++ L + + ++ + + Sbjct: 582 VNIDEEMSRLMSLQTAYAANARVLSAVREMLD 613 >gi|115523194|ref|YP_780105.1| flagellar hook-associated protein FlgK [Rhodopseudomonas palustris BisA53] gi|115517141|gb|ABJ05125.1| flagellar hook-associated protein FlgK [Rhodopseudomonas palustris BisA53] Length = 490 Score = 39.1 bits (89), Expect = 0.49, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 20/40 (50%), Gaps = 3/40 (7%) Query: 202 SNANSM---YEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 SN N + EM M+ + + F++ + LI + + E + Sbjct: 447 SNVNGVNMEDEMSFMLQVERTFSASSKLIATVDAMLKELL 486 >gi|317406195|gb|EFV86444.1| flagellar hook-associated protein FlgK [Achromobacter xylosoxidans C54] Length = 558 Score = 39.1 bits (89), Expect = 0.49, Method: Composition-based stats. Identities = 11/51 (21%), Positives = 20/51 (39%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 + + L A + L+T N++N TVG+ +V S + Sbjct: 1 MNLYKLALGGLNASQAGLATTGHNINNATTVGYNRQRVMISTAGAQATTNG 51 >gi|291277449|ref|YP_003517221.1| putative flagellar basal-body rod protein [Helicobacter mustelae 12198] gi|290964643|emb|CBG40497.1| putative flagellar basal-body rod protein [Helicobacter mustelae 12198] Length = 146 Score = 39.1 bits (89), Expect = 0.49, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 25/85 (29%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIS 75 R +A N++N DT +R + F + K I + SK Sbjct: 24 SMRQDLIASNIANVDTPFYRPKDIDFEHYLAQEKARIFDNKPHLELEMAQTSKNHLKGGD 83 Query: 76 TGTELDFALEGDAWFALESPRGIIL 100 T + D A + L Sbjct: 84 TQSYRPTTFFRDGHLARNDGNSVDL 108 >gi|261840252|gb|ACY00018.1| flagellar basal body rod protein FlgB [Helicobacter pylori 52] Length = 140 Score = 39.1 bits (89), Expect = 0.50, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 18/35 (51%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 R +A N++N DT +R + F V+ K +I Sbjct: 20 RQDMIASNIANVDTPFYRPKDLDFESVLAEKKAEI 54 >gi|254780091|ref|YP_003058198.1| flagellar basal body rod protein FlgB [Helicobacter pylori B38] gi|254002004|emb|CAX30263.1| Flagellar basal-body rod protein DlgB [Helicobacter pylori B38] Length = 140 Score = 39.1 bits (89), Expect = 0.50, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 18/35 (51%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 R +A N++N DT +R + F V+ K +I Sbjct: 20 RQDMIASNIANVDTPFYRPKDLDFESVLAEKKAEI 54 >gi|299068729|emb|CBJ39968.1| flagellar component of cell-proximal portion of basal-body rod, protein flgb [Ralstonia solanacearum CMR15] Length = 153 Score = 39.1 bits (89), Expect = 0.50, Method: Composition-based stats. Identities = 17/121 (14%), Positives = 34/121 (28%), Gaps = 3/121 (2%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR +A N++N DT ++ F + + + Sbjct: 15 ALRLRSQRHQLLASNIANADTPSYKARDFDFQSALQKATGQQSGNSLPMTATAAGHLTAA 74 Query: 71 GSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVP 130 G+ + +L + T + + DG+ V G+ +V Sbjct: 75 GAQAGDVVPMQASLSAQSQADPLQGEVQYRT---SQQPSIDGNTVDMDGERMRFADNTVR 131 Query: 131 I 131 Sbjct: 132 Y 132 >gi|32266906|ref|NP_860938.1| flagellar basal body rod protein FlgB [Helicobacter hepaticus ATCC 51449] gi|32262958|gb|AAP78004.1| flagellar basal body rod protein FlgB [Helicobacter hepaticus ATCC 51449] Length = 144 Score = 39.1 bits (89), Expect = 0.51, Method: Composition-based stats. Identities = 9/30 (30%), Positives = 15/30 (50%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGA 47 R +A N++N DT +R V F + + Sbjct: 23 RQDMIASNLANVDTPFYRPKDVNFEQYLSR 52 >gi|317011795|gb|ADU85542.1| flagellar basal body rod protein FlgB [Helicobacter pylori SouthAfrica7] Length = 140 Score = 39.1 bits (89), Expect = 0.51, Method: Composition-based stats. Identities = 9/29 (31%), Positives = 15/29 (51%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVG 46 R +A N++N DT +R + F V+ Sbjct: 20 RQDMIASNIANVDTPFYRPKDLDFESVLA 48 >gi|261838847|gb|ACX98613.1| flagellar basal-body rod protein [Helicobacter pylori 51] Length = 140 Score = 39.1 bits (89), Expect = 0.51, Method: Composition-based stats. Identities = 9/29 (31%), Positives = 15/29 (51%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVG 46 R +A N++N DT +R + F V+ Sbjct: 20 RQDMIASNIANVDTPFYRPKDLDFESVLA 48 >gi|242238975|ref|YP_002987156.1| flagellar hook-associated protein FlgK [Dickeya dadantii Ech703] gi|242131032|gb|ACS85334.1| flagellar hook-associated protein FlgK [Dickeya dadantii Ech703] Length = 551 Score = 39.1 bits (89), Expect = 0.51, Method: Composition-based stats. Identities = 12/39 (30%), Positives = 20/39 (51%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK 49 A + LST ++N+SN+ T G+ V ++ G K Sbjct: 12 GLKAAQVALSTTSNNISNSSTDGYNRQSVSLAQTSGTTK 50 >gi|171059415|ref|YP_001791764.1| flagellar basal-body rod protein FlgB [Leptothrix cholodnii SP-6] gi|170776860|gb|ACB34999.1| flagellar basal-body rod protein FlgB [Leptothrix cholodnii SP-6] Length = 134 Score = 39.1 bits (89), Expect = 0.51, Method: Composition-based stats. Identities = 11/73 (15%), Positives = 29/73 (39%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A + +R +A N++N +T G+ + F+ + + + + ++ V Sbjct: 15 ALVLRSERQRLIASNIANAETPGYVARDLDFASALKQAVGEQSVGGALATTHGGHIPVAV 74 Query: 71 GSFISTGTELDFA 83 G+ ++ A Sbjct: 75 GARSASQLTYATA 87 >gi|5361014|gb|AAD42921.1|U12817_15 polar flagellar hook associated protein type 1 [Vibrio parahaemolyticus] Length = 658 Score = 39.1 bits (89), Expect = 0.51, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 20/35 (57%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39 N+G + L +++L+T N+SN +T G+ V Sbjct: 18 LNVGTQSVLTAQRQLNTTGHNISNVNTEGYSRQSV 52 Score = 37.2 bits (84), Expect = 2.2, Method: Composition-based stats. Identities = 4/36 (11%), Positives = 13/36 (36%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 N E M+ Q + + + ++ + ++ Sbjct: 621 VNLDEEAANMMKFQQAYMASSRVMQAANDTFNTILQ 656 >gi|37525838|ref|NP_929182.1| flagellar basal body rod protein FlgB [Photorhabdus luminescens subsp. laumondii TTO1] gi|36785267|emb|CAE14208.1| Flagellar basal-body rod protein FlgB (Putative proximal rod protein) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 137 Score = 39.1 bits (89), Expect = 0.51, Method: Composition-based stats. Identities = 8/69 (11%), Positives = 20/69 (28%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A +R ++ N++N DT G++ + F+ + + + Sbjct: 15 ALSLRSRRQEILSANIANADTPGYQARDIDFATQLKKTIAHGRVTGNGIGLTLTSDRHIP 74 Query: 71 GSFISTGTE 79 Sbjct: 75 IQPQKRMEM 83 >gi|317013373|gb|ADU83981.1| flagellar basal body rod protein FlgB [Helicobacter pylori Lithuania75] Length = 140 Score = 39.1 bits (89), Expect = 0.51, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 18/35 (51%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 R +A N++N DT +R + F V+ K +I Sbjct: 20 RQDMIASNIANVDTPFYRPKDLDFESVLAEKKAEI 54 >gi|153840135|ref|ZP_01992802.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus AQ3810] gi|149746243|gb|EDM57333.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus AQ3810] Length = 430 Score = 39.1 bits (89), Expect = 0.52, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 20/35 (57%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39 N+G + L +++L+T N+SN +T G+ V Sbjct: 6 LNVGTQSVLTAQRQLNTTGHNISNVNTEGYSRQSV 40 >gi|331667482|ref|ZP_08368346.1| flagellar hook-associated protein 1 (HAP1) [Escherichia coli TA271] gi|331065067|gb|EGI36962.1| flagellar hook-associated protein 1 (HAP1) [Escherichia coli TA271] Length = 218 Score = 39.1 bits (89), Expect = 0.52, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+T ++N+S+ + G+ ++ + Sbjct: 1 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|89056665|ref|YP_512116.1| flagellar hook-associated protein FlgK [Jannaschia sp. CCS1] gi|88866214|gb|ABD57091.1| flagellar hook-associated protein FlgK putative [Jannaschia sp. CCS1] Length = 487 Score = 39.1 bits (89), Expect = 0.52, Method: Composition-based stats. Identities = 7/32 (21%), Positives = 16/32 (50%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGF 34 ++ + L+ A + V+ N++N T G+ Sbjct: 5 STLSSALSGLTASARAADIVSSNLANAMTEGY 36 >gi|86139478|ref|ZP_01058047.1| flagellar basal-body rod protein; FlgB [Roseobacter sp. MED193] gi|85823981|gb|EAQ44187.1| flagellar basal-body rod protein; FlgB [Roseobacter sp. MED193] Length = 137 Score = 39.1 bits (89), Expect = 0.53, Method: Composition-based stats. Identities = 20/123 (16%), Positives = 39/123 (31%), Gaps = 5/123 (4%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIKNDID----QKI 56 F I + +R + V++N++N DT G+ +K F EV A D + Sbjct: 14 LNVFKIAYSMASHAGKRQALVSENIANADTPGYHAKDIKPFKEVYAAGPRPGDMVASRGS 73 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVS 116 + V + D ++ + +R + L + Sbjct: 74 HLNGINGSNMDWAVTTSAVGTDPNDNSVSIETEILNGVEVKRQHSRALAIYKSSMNILRT 133 Query: 117 ASG 119 + G Sbjct: 134 SLG 136 >gi|332525069|ref|ZP_08401249.1| flagellar basal body protein [Rubrivivax benzoatilyticus JA2] gi|332108358|gb|EGJ09582.1| flagellar basal body protein [Rubrivivax benzoatilyticus JA2] Length = 150 Score = 39.1 bits (89), Expect = 0.53, Method: Composition-based stats. Identities = 10/39 (25%), Positives = 17/39 (43%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK 49 A +R +A N++N DT G+ FS+ + Sbjct: 15 ALALRSERQRVIASNIANADTPGYVARDFDFSQALREAT 53 >gi|229918624|ref|YP_002887270.1| flagellar basal-body rod protein FlgB [Exiguobacterium sp. AT1b] gi|229470053|gb|ACQ71825.1| flagellar basal-body rod protein FlgB [Exiguobacterium sp. AT1b] Length = 122 Score = 39.1 bits (89), Expect = 0.53, Method: Composition-based stats. Identities = 11/66 (16%), Positives = 27/66 (40%), Gaps = 1/66 (1%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN-DIDQKISFVASGKEYLSKEVGSFIST 76 ++ N+SN DT F+ + F + + + + ++ + + + G+ S Sbjct: 21 NQKVISHNLSNIDTPNFKAKQAVFEQTLQSEMRLKLQGGRPSDSTQSKVIDRAGGAMRSD 80 Query: 77 GTELDF 82 G +D Sbjct: 81 GNNVDL 86 >gi|197120202|ref|YP_002140629.1| flagellar basal body rod protein FlgB [Geobacter bemidjiensis Bem] gi|197089562|gb|ACH40833.1| flagellar basal body rod protein FlgB [Geobacter bemidjiensis Bem] Length = 139 Score = 39.1 bits (89), Expect = 0.54, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 15/26 (57%) Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFS 42 +R S +A N++N +T G+ + F Sbjct: 23 KRQSVIASNLANVETPGYTPSDLSFE 48 >gi|119477947|ref|ZP_01618047.1| flagellar hook-associated protein K [marine gamma proteobacterium HTCC2143] gi|119448860|gb|EAW30102.1| flagellar hook-associated protein K [marine gamma proteobacterium HTCC2143] Length = 676 Score = 39.1 bits (89), Expect = 0.54, Method: Composition-based stats. Identities = 9/53 (16%), Positives = 21/53 (39%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54 + N+G++A ++ L +N+SN + + + S + Q Sbjct: 1 MSLLNVGISALTTNQKLLQVTGNNISNAGVESYSRQRAEVSTRPEQLLGGSYQ 53 >gi|34498343|ref|NP_902558.1| flagellar basal-body rod protein flgB [Chromobacterium violaceum ATCC 12472] gi|34104197|gb|AAQ60556.1| flagellar basal-body rod protein flgB [Chromobacterium violaceum ATCC 12472] Length = 137 Score = 39.1 bits (89), Expect = 0.54, Method: Composition-based stats. Identities = 8/54 (14%), Positives = 19/54 (35%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 A R + N++N +T ++ + F + A + Q + + Sbjct: 15 ALNLQAYRAEVIGSNVANAETPYYKAVDFDFKSALQAQVDKQGQLGLALTDARH 68 >gi|68164549|gb|AAY87278.1| predicted flagellar proximal rod protein [uncultured bacterium BAC17H8] Length = 128 Score = 39.1 bits (89), Expect = 0.55, Method: Composition-based stats. Identities = 9/49 (18%), Positives = 20/49 (40%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 N+ A +R +A N++N T F+ + F ++ + + Sbjct: 8 LNLHATALTVRAKRNKILASNIANAATPNFKARDINFQALINKSEGEGP 56 >gi|28897559|ref|NP_797164.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus RIMD 2210633] gi|260364617|ref|ZP_05777219.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus K5030] gi|260878278|ref|ZP_05890633.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus AN-5034] gi|260898108|ref|ZP_05906604.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus Peru-466] gi|260901960|ref|ZP_05910355.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus AQ4037] gi|28805771|dbj|BAC59048.1| polar flagellar hook associated protein type 1 FlgK [Vibrio parahaemolyticus RIMD 2210633] gi|308086131|gb|EFO35826.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus Peru-466] gi|308090129|gb|EFO39824.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus AN-5034] gi|308106763|gb|EFO44303.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus AQ4037] gi|308115094|gb|EFO52634.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus K5030] gi|328473447|gb|EGF44295.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus 10329] Length = 646 Score = 39.1 bits (89), Expect = 0.55, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 20/35 (57%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39 N+G + L +++L+T N+SN +T G+ V Sbjct: 6 LNVGTQSVLTAQRQLNTTGHNISNVNTEGYSRQSV 40 Score = 37.2 bits (84), Expect = 2.3, Method: Composition-based stats. Identities = 4/36 (11%), Positives = 13/36 (36%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 N E M+ Q + + + ++ + ++ Sbjct: 609 VNLDEEAANMMKFQQAYMASSRVMQAANDTFNTILQ 644 >gi|308185346|ref|YP_003929479.1| flagellar basal body rod protein FlgB [Helicobacter pylori SJM180] gi|308061266|gb|ADO03162.1| flagellar basal body rod protein FlgB [Helicobacter pylori SJM180] Length = 140 Score = 39.1 bits (89), Expect = 0.55, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 18/35 (51%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 R +A N++N DT +R + F V+ K +I Sbjct: 20 RQDMIASNIANVDTPFYRPKDLDFESVLAEKKAEI 54 >gi|300938638|ref|ZP_07153367.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 21-1] gi|300456423|gb|EFK19916.1| flagellar basal-body rod protein FlgB [Escherichia coli MS 21-1] Length = 138 Score = 39.1 bits (89), Expect = 0.55, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 23/62 (37%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR +A N++N DT G++T + F+ + + S VA Sbjct: 15 ALNLRAQRQEVLAANIANADTPGYQTRDIDFASELKKVMQRGRDATSVVALTMTSTQHIP 74 Query: 71 GS 72 Sbjct: 75 AQ 76 >gi|99082805|ref|YP_614959.1| flagellar basal body rod protein FlgB [Ruegeria sp. TM1040] gi|99039085|gb|ABF65697.1| Flagellar basal-body rod protein flgB [Ruegeria sp. TM1040] Length = 129 Score = 39.1 bits (89), Expect = 0.55, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIKNDID 53 FNI + +R + V++N++N DT G+ +K F EV A + D Sbjct: 5 LNVFNIAYSMATHAGKRQALVSENIANADTPGYHAKDIKPFREVFAASEAQGD 57 >gi|253702511|ref|YP_003023700.1| flagellar basal-body rod protein FlgB [Geobacter sp. M21] gi|251777361|gb|ACT19942.1| flagellar basal-body rod protein FlgB [Geobacter sp. M21] Length = 139 Score = 39.1 bits (89), Expect = 0.56, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 15/26 (57%) Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFS 42 +R S +A N++N +T G+ + F Sbjct: 23 KRQSVIASNLANVETPGYAPSDLSFE 48 >gi|312884836|ref|ZP_07744528.1| flagellar basal body rod protein FlgC [Vibrio caribbenthicus ATCC BAA-2122] gi|309367488|gb|EFP95048.1| flagellar basal body rod protein FlgC [Vibrio caribbenthicus ATCC BAA-2122] Length = 145 Score = 39.1 bits (89), Expect = 0.57, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 6/75 (8%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKISFVA 60 I +A A RL+TVA N++N D V ++ +K F+ V + + A Sbjct: 9 IAGSAMNAQSVRLNTVASNLANADAVSANADDAYKALKPVFATVYNKTQLSVSDNAYPNA 68 Query: 61 SGKEYLSKEVGSFIS 75 + + Sbjct: 69 EVRIVDVVQSSKQAE 83 Score = 39.1 bits (89), Expect = 0.59, Method: Composition-based stats. Identities = 6/42 (14%), Positives = 18/42 (42%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ + + + EM M+ T+ F + ++ + + Sbjct: 97 GYVYYPDIDVVAEMADMMSATRSFETNVAVLGNVKSMQQGLL 138 >gi|303326603|ref|ZP_07357045.1| flagellar basal-body rod protein FlgB [Desulfovibrio sp. 3_1_syn3] gi|302862591|gb|EFL85523.1| flagellar basal-body rod protein FlgB [Desulfovibrio sp. 3_1_syn3] Length = 137 Score = 39.1 bits (89), Expect = 0.57, Method: Composition-based stats. Identities = 8/71 (11%), Positives = 22/71 (30%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 QR + + N++N +T ++ ++ F + + + + S + Sbjct: 16 MDMQLQRQNVITSNLANVETPNYKPRELAFEKELQSALGLDMKGRMSATSEGHMPAAFNP 75 Query: 72 SFISTGTELDF 82 F Sbjct: 76 DNFGPEWSKQF 86 >gi|213621056|ref|ZP_03373839.1| flagellar hook-associated protein FlgK [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 78 Score = 39.1 bits (89), Expect = 0.57, Method: Composition-based stats. Identities = 9/52 (17%), Positives = 23/52 (44%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + N ++ A + L+TV++N++N + G+ ++ + Sbjct: 1 MSSLINHAMSGLNAAQAALNTVSNNINNYNVAGYTRQTTILAQANSTLGAGG 52 >gi|107023946|ref|YP_622273.1| flagellar hook-associated protein FlgK [Burkholderia cenocepacia AU 1054] gi|116691033|ref|YP_836656.1| flagellar hook-associated protein FlgK [Burkholderia cenocepacia HI2424] gi|170734367|ref|YP_001766314.1| flagellar hook-associated protein FlgK [Burkholderia cenocepacia MC0-3] gi|105894135|gb|ABF77300.1| Flagellar hook-associated protein [Burkholderia cenocepacia AU 1054] gi|116649122|gb|ABK09763.1| flagellar hook-associated protein FlgK [Burkholderia cenocepacia HI2424] gi|169817609|gb|ACA92192.1| flagellar hook-associated protein FlgK [Burkholderia cenocepacia MC0-3] Length = 643 Score = 39.1 bits (89), Expect = 0.57, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 29/82 (35%), Gaps = 1/82 (1%) Query: 1 MQTSF-NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFV 59 M S N+G++ A L+T N+SN T G+ + ++E G + Sbjct: 1 MSNSLMNLGVSGLNAALWGLTTTGQNISNAATPGYSVERPVYAEASGQYTSSGYMPQGVN 60 Query: 60 ASGKEYLSKEVGSFISTGTELD 81 + + S G + Sbjct: 61 TVTVQRQYSQYLSDQLNGAQTQ 82 Score = 36.4 bits (82), Expect = 3.7, Method: Composition-based stats. Identities = 7/72 (9%), Positives = 19/72 (26%) Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 +V + S + + + + S N E ++ Q + + + Sbjct: 568 ANYVNGIGNTASQLKSSSAAQTALVGQITQAQQSVSGVNQNEEAANLMQYQQLYQANAKV 627 Query: 227 IDENEKSMLEAI 238 I + Sbjct: 628 IQTASTLFQTVL 639 >gi|332531615|ref|ZP_08407512.1| flagellar basal-body rod protein FlgB [Hylemonella gracilis ATCC 19624] gi|332038978|gb|EGI75407.1| flagellar basal-body rod protein FlgB [Hylemonella gracilis ATCC 19624] Length = 161 Score = 39.1 bits (89), Expect = 0.57, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 20/45 (44%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQK 55 A + +R T+A N++N DT G++ F + D K Sbjct: 15 ALVLRSERQRTIASNIANGDTPGYQARDFDFKSAMQEALGQTDAK 59 >gi|239817168|ref|YP_002946078.1| flagellar basal-body rod protein FlgB [Variovorax paradoxus S110] gi|239803745|gb|ACS20812.1| flagellar basal-body rod protein FlgB [Variovorax paradoxus S110] Length = 136 Score = 39.1 bits (89), Expect = 0.57, Method: Composition-based stats. Identities = 12/72 (16%), Positives = 21/72 (29%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR +A N+++ DT ++ F+ + V Sbjct: 15 ALNLRTQRQEVLAANIAHADTPNYKARDFDFASRLTQAVEHGRAAQQPVQMAATSARHIQ 74 Query: 71 GSFISTGTELDF 82 S+ E D Sbjct: 75 ADAPSSMPERDL 86 >gi|56695105|ref|YP_165452.1| flagellar basal body rod protein FlgB [Ruegeria pomeroyi DSS-3] gi|56676842|gb|AAV93508.1| flagellar basal-body rod protein; FlgB [Ruegeria pomeroyi DSS-3] Length = 138 Score = 39.1 bits (89), Expect = 0.57, Method: Composition-based stats. Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 1/37 (2%) Query: 17 QRLSTVADNMSNTDTVGFR-TIKVKFSEVVGAIKNDI 52 R + +A NM+N DT G+R F+E Sbjct: 29 TRQAVIAQNMANADTPGYRERDIAPFAETFARETAGT 65 >gi|75760642|ref|ZP_00740670.1| Flagellar hook-associated protein 1 [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74491856|gb|EAO55044.1| Flagellar hook-associated protein 1 [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 208 Score = 39.1 bits (89), Expect = 0.58, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 25/53 (47%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 N L+ LA + L T N+SN T G+ V + V + + +Q+I + Sbjct: 7 NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSVGASNGHTPEQRIGY 59 >gi|34557981|ref|NP_907796.1| flagellar basal body rod protein FlgB [Wolinella succinogenes DSM 1740] gi|34483699|emb|CAE10696.1| FLAGELLAR BASAL-BODY ROD PROTEIN FLGB PROXIMAL ROD PROTEIN [Wolinella succinogenes] Length = 145 Score = 39.1 bits (89), Expect = 0.58, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 20/54 (37%), Gaps = 7/54 (12%) Query: 1 MQTSFNI-------GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA 47 M S A R ++ N++N DT +R + F EV+ + Sbjct: 1 MSESIYSYSQARELAYKALDYRSLRQDLISSNIANVDTPMYRPRDINFEEVLTS 54 >gi|255523707|ref|ZP_05390673.1| flagellar basal-body rod protein FlgB [Clostridium carboxidivorans P7] gi|296186711|ref|ZP_06855113.1| flagellar basal-body rod protein FlgB [Clostridium carboxidivorans P7] gi|255512576|gb|EET88850.1| flagellar basal-body rod protein FlgB [Clostridium carboxidivorans P7] gi|296048748|gb|EFG88180.1| flagellar basal-body rod protein FlgB [Clostridium carboxidivorans P7] Length = 133 Score = 39.1 bits (89), Expect = 0.59, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 30/70 (42%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A +R ADN++N +T G++ V F E + + +D+D K + K + Sbjct: 19 GLDASTERSKATADNIANINTKGYKRKYVTFEETLQSNMDDLDLKTTDDKHIKLQENYGQ 78 Query: 71 GSFISTGTEL 80 + + + Sbjct: 79 INTKTDNSTS 88 >gi|327478807|gb|AEA82117.1| flagellar basal body rod protein FlgC [Pseudomonas stutzeri DSM 4166] Length = 142 Score = 39.1 bits (89), Expect = 0.60, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 20/43 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ + N + EM M+ T+ F + +++ + +R Sbjct: 96 GYVYYPDINEIEEMTDMMSATRSFETGVEVLNRVKSMQQSLLR 138 Score = 37.2 bits (84), Expect = 2.3, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 32/102 (31%), Gaps = 7/102 (6%) Query: 4 SFN-IGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSEVVGAIKNDIDQKI 56 S I ++ A RL+TVA N++NTD+ ++ K F+ V + Sbjct: 5 SIYRIAGSSMNAQTVRLNTVASNLANTDSAAANPADVYQARKPMFAAVYENNSLTRGVGL 64 Query: 57 SFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGI 98 + + +G+ + I Sbjct: 65 GGAHVQVLDVVTSGAEPKRRYEPGNPLADGEGYVYYPDINEI 106 >gi|317014994|gb|ADU82430.1| flagellar basal body rod protein FlgB [Helicobacter pylori Gambia94/24] Length = 140 Score = 39.1 bits (89), Expect = 0.60, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 18/35 (51%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 R +A N++N DT +R + F V+ K +I Sbjct: 20 RQDMIASNIANVDTPFYRPKDLDFESVLAEKKAEI 54 >gi|225620569|ref|YP_002721826.1| flagellar hook-associated protein FlgK [Brachyspira hyodysenteriae WA1] gi|225215388|gb|ACN84122.1| flagellar hook-associated protein FlgK [Brachyspira hyodysenteriae WA1] Length = 672 Score = 39.1 bits (89), Expect = 0.60, Method: Composition-based stats. Identities = 12/72 (16%), Positives = 24/72 (33%), Gaps = 5/72 (6%) Query: 176 GISPNIPPTPLEDLSGVTVKRGFLED-----SNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + T + TV +LE S N E+ QM +N+ ++ Sbjct: 600 AKIASRTETANAETEKQTVVMEYLEKLRQSVSGVNLDEEVAQMAMYQHGYNASARVVSVM 659 Query: 231 EKSMLEAIRNIA 242 ++ + I + Sbjct: 660 DQLLDVVINRMG 671 >gi|220913741|ref|YP_002489050.1| flagellar hook-associated protein FlgK [Arthrobacter chlorophenolicus A6] gi|219860619|gb|ACL40961.1| flagellar hook-associated protein FlgK [Arthrobacter chlorophenolicus A6] Length = 472 Score = 39.1 bits (89), Expect = 0.60, Method: Composition-based stats. Identities = 8/53 (15%), Positives = 19/53 (35%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56 N A Q ++ N++N T G+ +++ S + + + Sbjct: 6 GLNTAFLGLTAARQGINLAGQNIANAGTEGYTRQRIEQSPIGAPSASGLTAPG 58 Score = 35.2 bits (79), Expect = 8.3, Method: Composition-based stats. Identities = 2/39 (5%), Positives = 13/39 (33%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 + E ++ + + ++ ++++ I Sbjct: 430 VSLDEENISLLTNQHAYQAAARVMTAVDEALDVLINRTG 468 >gi|114570488|ref|YP_757168.1| flagellar basal-body rod protein FlgB [Maricaulis maris MCS10] gi|114340950|gb|ABI66230.1| flagellar basal-body rod protein FlgB [Maricaulis maris MCS10] Length = 150 Score = 39.1 bits (89), Expect = 0.60, Method: Composition-based stats. Identities = 6/24 (25%), Positives = 13/24 (54%) Query: 11 AQLALEQRLSTVADNMSNTDTVGF 34 + R +A+N++N +T G+ Sbjct: 15 SMSFHSDRQQVIAENIANANTPGY 38 >gi|90422607|ref|YP_530977.1| flagellar basal body rod protein FlgB [Rhodopseudomonas palustris BisB18] gi|90104621|gb|ABD86658.1| flagellar basal body rod protein [Rhodopseudomonas palustris BisB18] Length = 125 Score = 39.1 bits (89), Expect = 0.60, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 26/42 (61%), Gaps = 1/42 (2%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-FSEVV 45 F++ + L R +T++ N++N +T G++ ++ FS+++ Sbjct: 7 FDVASSQAQWLSLRQATISSNVANANTPGYQAKDIESFSKLL 48 >gi|260429026|ref|ZP_05783003.1| flagellar hook-associated protein FlgK [Citreicella sp. SE45] gi|260419649|gb|EEX12902.1| flagellar hook-associated protein FlgK [Citreicella sp. SE45] Length = 485 Score = 39.1 bits (89), Expect = 0.60, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 20/42 (47%), Gaps = 1/42 (2%) Query: 199 LEDSN-ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 LE S ++ E+ +M+ + Q + + +I ++ M + Sbjct: 443 LELSAGVDTDAELQEMLRIEQHYAANARVITTVDELMQTLLS 484 Score = 36.0 bits (81), Expect = 4.5, Method: Composition-based stats. Identities = 8/28 (28%), Positives = 14/28 (50%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDT 31 + + L+ A + S VA N++N T Sbjct: 6 ALSNALSGLTANSRAASLVASNIANATT 33 >gi|90418394|ref|ZP_01226306.1| putative flagellar basal-body rod protein FlgB [Aurantimonas manganoxydans SI85-9A1] gi|90338066|gb|EAS51717.1| putative flagellar basal-body rod protein FlgB [Aurantimonas manganoxydans SI85-9A1] Length = 126 Score = 39.1 bits (89), Expect = 0.60, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 5/53 (9%) Query: 1 MQTSFNI-GLAAQLA--LEQRLSTVADNMSNTDTVGF-RTIKVKFSEVVGAIK 49 M S I GLA+Q L QR + VA+N++N DT G+ F+E + A Sbjct: 1 MD-SLYIFGLASQRTAYLAQRQTVVAENVANVDTPGYTSKDLSSFTEALDATA 52 >gi|291278934|ref|YP_003495769.1| flagellar basal-body rod protein FlgB [Deferribacter desulfuricans SSM1] gi|290753636|dbj|BAI80013.1| flagellar basal-body rod protein FlgB [Deferribacter desulfuricans SSM1] Length = 134 Score = 39.1 bits (89), Expect = 0.61, Method: Composition-based stats. Identities = 8/61 (13%), Positives = 23/61 (37%) Query: 21 TVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTEL 80 +++N++N DT ++ K+ F + + + + V + +S + Sbjct: 25 VISENIANVDTPFYKAKKLDFKDAMQDVMGTGKKLPLKVTNKYHISGSSENFSVSNYVKY 84 Query: 81 D 81 Sbjct: 85 Q 85 >gi|283834449|ref|ZP_06354190.1| flagellar hook-associated protein FlgK [Citrobacter youngae ATCC 29220] gi|291069996|gb|EFE08105.1| flagellar hook-associated protein FlgK [Citrobacter youngae ATCC 29220] Length = 458 Score = 39.1 bits (89), Expect = 0.61, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 22/78 (28%), Gaps = 2/78 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M NIG + + L+ A N +N T G+ + +GA + + V Sbjct: 1 MD-MINIGYSGASTAQVELNVTAQNTANAMTDGYTRQVAI-TSTIGASSGSANSAGNGVQ 58 Query: 61 SGKEYLSKEVGSFISTGT 78 Sbjct: 59 VDSIRRVSNQYQVNQVWY 76 >gi|227815505|ref|YP_002815514.1| flagellar hook-associated protein FlgK [Bacillus anthracis str. CDC 684] gi|227007204|gb|ACP16947.1| flagellar hook-associated protein FlgK [Bacillus anthracis str. CDC 684] Length = 202 Score = 39.1 bits (89), Expect = 0.61, Method: Composition-based stats. Identities = 5/34 (14%), Positives = 11/34 (32%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 N EM ++ + F + + I + Sbjct: 164 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 197 >gi|2105145|gb|AAB57896.1| FlgB [Treponema denticola] Length = 139 Score = 39.1 bits (89), Expect = 0.61, Method: Composition-based stats. Identities = 8/74 (10%), Positives = 22/74 (29%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A R + ++N++N+D F+ +V F + + + Sbjct: 16 ALDVNSLRYTVTSNNLANSDVPNFKRTEVNFESELKRAFDSEKNAKGAFQLATTHPLHIK 75 Query: 71 GSFISTGTELDFAL 84 + + + Sbjct: 76 SNEPIDYKTVSLCV 89 >gi|323191536|gb|EFZ76797.1| flagellar basal-body rod protein FlgC [Escherichia coli RN587/1] Length = 143 Score = 39.1 bits (89), Expect = 0.62, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 6/45 (13%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVV 45 I +A A RL+TVA N++N + ++ F+ V Sbjct: 9 ISGSAMTAQTLRLNTVASNLANANAPASSEAQAYKARSPVFAAVY 53 Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats. Identities = 4/35 (11%), Positives = 15/35 (42%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 N + +M M+ ++ F + +++ + + Sbjct: 104 VNVVEQMADMMSASRDFETNVDVLNNVKSMQQSLL 138 >gi|290474969|ref|YP_003467853.1| flagellar basal body rod cell-proximal protein [Xenorhabdus bovienii SS-2004] gi|289174286|emb|CBJ81076.1| flagellar biosynthesis; cell-proximal portion of basal-body rod [Xenorhabdus bovienii SS-2004] Length = 138 Score = 39.1 bits (89), Expect = 0.62, Method: Composition-based stats. Identities = 8/60 (13%), Positives = 22/60 (36%) Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76 QR ++ N++N DT G++ + F+ + + + + + + Sbjct: 21 QRQEILSANIANADTPGYQARDIDFAAQLKQVMAEGRVTGNGMKLRLASDRHIPAQSQNR 80 >gi|149188072|ref|ZP_01866367.1| flagellar hook-associated protein K [Vibrio shilonii AK1] gi|148838060|gb|EDL55002.1| flagellar hook-associated protein K [Vibrio shilonii AK1] Length = 622 Score = 39.1 bits (89), Expect = 0.62, Method: Composition-based stats. Identities = 13/76 (17%), Positives = 25/76 (32%), Gaps = 1/76 (1%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 N+G + L +++L+T N+SN +T G+ V + V Sbjct: 6 LNLGAQSVLTAQRQLNTTGHNISNANTEGYSRQSVI-QGTNTPRQFGGQTYGMGVHVENV 64 Query: 65 YLSKEVGSFISTGTEL 80 S + + Sbjct: 65 RRSWDQFAVKELNMAT 80 Score = 38.7 bits (88), Expect = 0.76, Method: Composition-based stats. Identities = 5/38 (13%), Positives = 15/38 (39%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S N E M+ Q + + + ++ ++ ++ Sbjct: 583 SGVNLDEEAANMMKFQQAYMASSRVMQAANETFDTILQ 620 >gi|24213047|ref|NP_710528.1| flagellar basal body rod protein FlgB [Leptospira interrogans serovar Lai str. 56601] gi|45656203|ref|YP_000289.1| flagellar basal body rod protein FlgB [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|24193738|gb|AAN47546.1| flagellar basal body rod protein FlgB [Leptospira interrogans serovar Lai str. 56601] gi|45599437|gb|AAS68926.1| flagellar basal-body rod protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 143 Score = 39.1 bits (89), Expect = 0.62, Method: Composition-based stats. Identities = 7/41 (17%), Positives = 16/41 (39%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51 + ++DN++N D F+ +V F ++ Sbjct: 17 GMNNSIFKRKVISDNIANADVPHFKRSEVIFESMIKRAIES 57 >gi|17548563|ref|NP_521903.1| flagellar basal-body rod protein FlgB [Ralstonia solanacearum GMI1000] gi|17430811|emb|CAD17493.1| probable flagellar basal-body rod protein flgb [Ralstonia solanacearum GMI1000] Length = 165 Score = 39.1 bits (89), Expect = 0.62, Method: Composition-based stats. Identities = 17/121 (14%), Positives = 34/121 (28%), Gaps = 3/121 (2%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR +A N++N DT ++ F + + + Sbjct: 27 ALRLRSQRHQLLASNIANADTPSYKARDFDFQSALQKAAGQQSGNSLPMTATAAGHLTAA 86 Query: 71 GSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVP 130 G+ + +L + T + + DG+ V G+ +V Sbjct: 87 GAPAGDVVPMQASLSAQSKADPLQGEVQYRT---SQQPSIDGNTVDMDGERMRFADNTVR 143 Query: 131 I 131 Sbjct: 144 Y 144 >gi|117919769|ref|YP_868961.1| flagellar basal body rod protein FlgB [Shewanella sp. ANA-3] gi|117612101|gb|ABK47555.1| flagellar basal-body rod protein FlgB [Shewanella sp. ANA-3] Length = 134 Score = 39.1 bits (89), Expect = 0.62, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 22/50 (44%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLS 67 R ++ N++N DT ++ V FS + K Q+ S +G E Sbjct: 22 RAEVISSNIANADTPHYKARDVDFSAALNIAKTQQQQRNSLEMTGDEQHF 71 >gi|218703523|ref|YP_002411042.1| flagellar basal body rod protein FlgC [Escherichia coli UMN026] gi|293403353|ref|ZP_06647444.1| flgC [Escherichia coli FVEC1412] gi|298378965|ref|ZP_06988846.1| flagellar basal-body rod protein FlgC [Escherichia coli FVEC1302] gi|300900363|ref|ZP_07118538.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 198-1] gi|218430620|emb|CAR11486.1| putative Flagellar basal-body rod protein flgC ( proximal rod protein) [Escherichia coli UMN026] gi|291429206|gb|EFF02226.1| flgC [Escherichia coli FVEC1412] gi|298280078|gb|EFI21582.1| flagellar basal-body rod protein FlgC [Escherichia coli FVEC1302] gi|300356119|gb|EFJ71989.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 198-1] Length = 143 Score = 38.7 bits (88), Expect = 0.63, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 6/45 (13%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVV 45 I +A A RL+TVA N++N + ++ F+ V Sbjct: 9 ISGSAMTAQTIRLNTVASNLANANAPAGSEAQAYKARSPVFAAVY 53 Score = 38.3 bits (87), Expect = 1.0, Method: Composition-based stats. Identities = 4/35 (11%), Positives = 15/35 (42%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 N + +M M+ ++ F + +++ + + Sbjct: 104 VNVVEQMADMMSASRDFETNVDVLNNVKSMQQSLL 138 >gi|163758012|ref|ZP_02165100.1| flagellar basal-body rod protein B [Hoeflea phototrophica DFL-43] gi|162284301|gb|EDQ34584.1| flagellar basal-body rod protein B [Hoeflea phototrophica DFL-43] Length = 125 Score = 38.7 bits (88), Expect = 0.63, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 1/42 (2%) Query: 18 RLSTVADNMSNTDTVGFR-TIKVKFSEVVGAIKNDIDQKISF 58 R S VA N++N +T G+ F V+ + Sbjct: 20 RQSVVAGNIANVNTPGYTAREVAAFEAVMQETGTRMAATHPG 61 >gi|283784090|ref|YP_003363955.1| lateral flagellar hook associated protein 1 [Citrobacter rodentium ICC168] gi|282947544|emb|CBG87097.1| lateral flagellar hook associated protein 1 [Citrobacter rodentium ICC168] Length = 455 Score = 38.7 bits (88), Expect = 0.63, Method: Composition-based stats. Identities = 13/85 (15%), Positives = 24/85 (28%), Gaps = 1/85 (1%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M NIG + + L+ A N +N T G+ S + + + Sbjct: 1 MD-MINIGYSGASTAQVELNVTAQNTANAMTDGYTRQVAVVSSIGASAGSPNSAGNGVQV 59 Query: 61 SGKEYLSKEVGSFISTGTELDFALE 85 +S + D+ Sbjct: 60 DSIRRVSNQYQVNQVWYAASDYGYY 84 >gi|82702450|ref|YP_412016.1| flagellar basal-body rod protein FlgB [Nitrosospira multiformis ATCC 25196] gi|82410515|gb|ABB74624.1| flagellar basal-body rod protein FlgB [Nitrosospira multiformis ATCC 25196] Length = 134 Score = 38.7 bits (88), Expect = 0.64, Method: Composition-based stats. Identities = 8/41 (19%), Positives = 17/41 (41%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51 A R +A N++N DT ++ + F + + + Sbjct: 15 AANLRAHRQQLIASNIANADTPQYKARDINFKDAMESALTG 55 >gi|254230134|ref|ZP_04923529.1| flagellar hook-associated protein FlgK [Vibrio sp. Ex25] gi|151937327|gb|EDN56190.1| flagellar hook-associated protein FlgK [Vibrio sp. Ex25] Length = 660 Score = 38.7 bits (88), Expect = 0.65, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 20/35 (57%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39 N+G + L +++L+T N+SN +T G+ V Sbjct: 20 LNVGTQSVLTAQRQLNTTGHNISNVNTEGYSRQSV 54 Score = 38.3 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 5/38 (13%), Positives = 14/38 (36%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S N E M+ Q + + + ++ + ++ Sbjct: 621 SGVNLDEEAANMMKFQQAYMASSRVMQAANDTFNTILQ 658 >gi|157376219|ref|YP_001474819.1| flagellar basal body rod protein FlgB [Shewanella sediminis HAW-EB3] gi|157318593|gb|ABV37691.1| flagellar basal-body rod protein FlgB [Shewanella sediminis HAW-EB3] Length = 132 Score = 38.7 bits (88), Expect = 0.65, Method: Composition-based stats. Identities = 9/61 (14%), Positives = 24/61 (39%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIS 75 QR ++ N++N DT ++ + F + + A + + + K + + + Sbjct: 20 SQRAQVISSNIANADTPHYKARDLDFDKAMQAATSRQNGLSMSRSDVKHFDLTALSGQNT 79 Query: 76 T 76 Sbjct: 80 A 80 >gi|213419605|ref|ZP_03352671.1| flagellar basal body rod protein FlgG [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 29 Score = 38.7 bits (88), Expect = 0.66, Method: Composition-based stats. Identities = 2/28 (7%), Positives = 12/28 (42%) Query: 212 QMIHLTQKFNSITTLIDENEKSMLEAIR 239 MI + + + + + ++ + + + Sbjct: 1 NMIQVQRAYEINSKAVSTTDQMLQKLTQ 28 >gi|91225879|ref|ZP_01260848.1| flagellar hook-associated protein K [Vibrio alginolyticus 12G01] gi|91189529|gb|EAS75805.1| flagellar hook-associated protein K [Vibrio alginolyticus 12G01] Length = 646 Score = 38.7 bits (88), Expect = 0.66, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 20/35 (57%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39 N+G + L +++L+T N+SN +T G+ V Sbjct: 6 LNVGTQSVLTAQRQLNTTGHNISNVNTEGYSRQSV 40 Score = 38.3 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 5/38 (13%), Positives = 14/38 (36%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S N E M+ Q + + + ++ + ++ Sbjct: 607 SGVNLDEEAANMMKFQQAYMASSRVMQAANDTFNTILQ 644 >gi|257471392|ref|ZP_05635391.1| flagellar basal-body rod protein FlgB [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|11386804|sp|P57419|FLGB_BUCAI RecName: Full=Flagellar basal-body rod protein flgB gi|311086075|gb|ADP66157.1| flagellar basal-body rod protein FlgB [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311086646|gb|ADP66727.1| flagellar basal-body rod protein FlgB [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] gi|311087232|gb|ADP67312.1| flagellar basal-body rod protein FlgB [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] gi|311087751|gb|ADP67830.1| flagellar basal-body rod protein FlgB [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 133 Score = 38.7 bits (88), Expect = 0.66, Method: Composition-based stats. Identities = 10/32 (31%), Positives = 17/32 (53%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFS 42 A QR ++ N++N DT G+++I F Sbjct: 15 ALNLCSQRQEILSANIANADTPGYKSIDFNFK 46 >gi|328545572|ref|YP_004305681.1| flagellar hook-associated protein [polymorphum gilvum SL003B-26A1] gi|326415313|gb|ADZ72376.1| Flagellar hook-associated protein [Polymorphum gilvum SL003B-26A1] Length = 459 Score = 38.7 bits (88), Expect = 0.66, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 18/34 (52%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 I ++ + + +LS A+N++N DT G+ Sbjct: 10 IATSSLASTQVQLSIAANNVANADTEGYTRKTAS 43 >gi|329402361|gb|AEB91479.1| hook-associated protein 1 [Helicobacter pylori SS1] Length = 606 Score = 38.7 bits (88), Expect = 0.67, Method: Composition-based stats. Identities = 6/29 (20%), Positives = 11/29 (37%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTD 30 +S N A + + +N+SN Sbjct: 5 LSSLNTSYTGLQAHQSMVDVTGNNISNAS 33 Score = 38.7 bits (88), Expect = 0.67, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 14/37 (37%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S + EM +I + + +I ++ + + Sbjct: 566 SQVSVDEEMLNLIKFQSGYAANAKVITAIDRMIDTFL 602 >gi|294500942|ref|YP_003564642.1| flagellar basal-body rod protein FlgB [Bacillus megaterium QM B1551] gi|294350879|gb|ADE71208.1| flagellar basal-body rod protein FlgB [Bacillus megaterium QM B1551] Length = 129 Score = 38.7 bits (88), Expect = 0.67, Method: Composition-based stats. Identities = 12/95 (12%), Positives = 29/95 (30%), Gaps = 4/95 (4%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKV----KFSEVVGAIKNDIDQKISFVASGKEY 65 Q+ T+A N++N DT +++ V +F +++ + Sbjct: 13 NGISYASQKQQTIAQNIANVDTPNYKSKTVSRTSEFRDLLHNELEAYQTDSKHIPFSDSS 72 Query: 66 LSKEVGSFISTGTELDFALEGDAWFALESPRGIIL 100 ++ ++ D A + I Sbjct: 73 QRAITQQGNTSYQANGNNVDMDKEMADMAENQIYY 107 >gi|149189833|ref|ZP_01868113.1| flagellar basal-body rod protein B [Vibrio shilonii AK1] gi|148836319|gb|EDL53276.1| flagellar basal-body rod protein B [Vibrio shilonii AK1] Length = 120 Score = 38.7 bits (88), Expect = 0.67, Method: Composition-based stats. Identities = 15/85 (17%), Positives = 26/85 (30%), Gaps = 1/85 (1%) Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76 QR +A N++N DT G+ + F+ V+ N Sbjct: 21 QRTKVLASNLANVDTPGYLAKDLSFTTVMKQ-ANPNGVHTPTPKLDIATQYSVPYQNSKD 79 Query: 77 GTELDFALEGDAWFALESPRGIILT 101 G ++ +E + LT Sbjct: 80 GNTVELGVEQAKFTQNNMDFQTSLT 104 >gi|115522799|ref|YP_779710.1| flagellar hook-associated protein FlgK [Rhodopseudomonas palustris BisA53] gi|115516746|gb|ABJ04730.1| flagellar hook-associated protein FlgK [Rhodopseudomonas palustris BisA53] Length = 589 Score = 38.7 bits (88), Expect = 0.67, Method: Composition-based stats. Identities = 8/28 (28%), Positives = 18/28 (64%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVGF 34 I +++ + + ++S + N+SN DT G+ Sbjct: 9 IAVSSLMVTQVQISVTSSNISNADTTGY 36 >gi|313650476|gb|EFS14883.1| flagellar basal-body rod protein flgC [Shigella flexneri 2a str. 2457T] gi|332758232|gb|EGJ88555.1| flagellar basal-body rod protein flgC [Shigella flexneri 4343-70] gi|332759647|gb|EGJ89952.1| flagellar basal-body rod protein flgC [Shigella flexneri 2747-71] gi|332761418|gb|EGJ91702.1| flagellar basal-body rod protein flgC [Shigella flexneri K-671] gi|332767680|gb|EGJ97873.1| flagella basal body rod family protein [Shigella flexneri 2930-71] gi|333004882|gb|EGK24402.1| flagellar basal-body rod protein flgC [Shigella flexneri VA-6] gi|333005639|gb|EGK25157.1| flagellar basal-body rod protein flgC [Shigella flexneri K-218] gi|333019455|gb|EGK38738.1| flagellar basal-body rod protein flgC [Shigella flexneri K-304] gi|333019765|gb|EGK39037.1| flagellar basal-body rod protein flgC [Shigella flexneri K-227] Length = 90 Score = 38.7 bits (88), Expect = 0.67, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 28/77 (36%), Gaps = 6/77 (7%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKFSEVVGAIKNDIDQK 55 F+I +A A QRL+ A N++N G +R +V F K Sbjct: 4 LNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRAKQVVFQVNAAPGAATGGVK 63 Query: 56 ISFVASGKEYLSKEVGS 72 ++ V + + + Sbjct: 64 VADVKKVRPRTNWFMNQ 80 >gi|299822281|ref|ZP_07054167.1| flagellar hook-associated protein FlgK [Listeria grayi DSM 20601] gi|299815810|gb|EFI83048.1| flagellar hook-associated protein FlgK [Listeria grayi DSM 20601] Length = 509 Score = 38.7 bits (88), Expect = 0.67, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 17/41 (41%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVG 46 N+ L+ A + N+SN +T G+ V + G Sbjct: 7 NVSLSGMNAAQIATMVAQQNISNINTAGYVRQNVNQQALYG 47 Score = 36.0 bits (81), Expect = 5.3, Method: Composition-based stats. Identities = 4/36 (11%), Positives = 11/36 (30%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 N EM ++ + + T ++ + Sbjct: 472 VNIDEEMTNIMQYQSYYVANTKAMNIVNDMFQSLLN 507 >gi|317012896|gb|ADU83504.1| flagellar hook-associated protein FlgK [Helicobacter pylori Lithuania75] Length = 606 Score = 38.7 bits (88), Expect = 0.68, Method: Composition-based stats. Identities = 6/29 (20%), Positives = 11/29 (37%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTD 30 +S N A + + +N+SN Sbjct: 5 LSSLNTSYTGLQAHQSMVDVTGNNISNAS 33 Score = 38.7 bits (88), Expect = 0.72, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 14/37 (37%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S + EM +I + + +I ++ + + Sbjct: 566 SQVSVDEEMLNLIKFQSGYAANAKVITAIDRMIDALL 602 >gi|228958018|ref|ZP_04119754.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis serovar pakistani str. T13001] gi|228801643|gb|EEM48524.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis serovar pakistani str. T13001] Length = 432 Score = 38.7 bits (88), Expect = 0.68, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 32/101 (31%), Gaps = 6/101 (5%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65 N L+ LA + L T N+SN T G+ V + G K ++ Sbjct: 7 NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSA-GGSKGYAPEQRIGYGVQTLG 65 Query: 66 LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106 + + + + + F+ + L+R Sbjct: 66 VDRITDEVKTKQYN-----DQMSQFSYYAYMNSTLSRVESM 101 Score = 38.3 bits (87), Expect = 1.0, Method: Composition-based stats. Identities = 5/34 (14%), Positives = 11/34 (32%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 N EM ++ + F + + I + Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427 >gi|229189840|ref|ZP_04316851.1| Flagellar basal-body rod protein [Bacillus cereus ATCC 10876] gi|228593648|gb|EEK51456.1| Flagellar basal-body rod protein [Bacillus cereus ATCC 10876] Length = 147 Score = 38.7 bits (88), Expect = 0.68, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 29/72 (40%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 L + +TV+ N++N +T G++ V F+E + + + S + Sbjct: 24 MNYLVTKRNTVSSNIANGNTPGYKAQDVTFAEQMNKSSALYKNNAADLKSNPDLYQTNKM 83 Query: 72 SFISTGTELDFA 83 + T+ +A Sbjct: 84 HLPTVNTKNTYA 95 >gi|90418364|ref|ZP_01226276.1| putative flagellar hook-associated protein FlgK [Aurantimonas manganoxydans SI85-9A1] gi|90338036|gb|EAS51687.1| putative flagellar hook-associated protein FlgK [Aurantimonas manganoxydans SI85-9A1] Length = 499 Score = 38.7 bits (88), Expect = 0.68, Method: Composition-based stats. Identities = 6/35 (17%), Positives = 16/35 (45%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 N EM +++ L + + + + LI + + + Sbjct: 462 INIDDEMTRLLDLERSYQASSKLISTVGQMIDSLL 496 >gi|332704840|ref|ZP_08424928.1| flagellar basal body rod protein [Desulfovibrio africanus str. Walvis Bay] gi|332554989|gb|EGJ52033.1| flagellar basal body rod protein [Desulfovibrio africanus str. Walvis Bay] Length = 126 Score = 38.7 bits (88), Expect = 0.68, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 19/42 (45%) Query: 8 GLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK 49 L A A+ +L A+N++N +T FR +V + Sbjct: 6 SLQALDAVAIQLMVTANNVANVNTEEFRAARVDLEDGYQGQG 47 Score = 38.3 bits (87), Expect = 0.86, Method: Composition-based stats. Identities = 11/68 (16%), Positives = 25/68 (36%) Query: 171 RRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDEN 230 RR + G P L T G+++ SN + E+ +++ + + ++ Sbjct: 55 RRSDQGPHIPDNPERLAAAGYATAAEGWVQGSNTDLAVELTRLMREEATYTANLRVMRTA 114 Query: 231 EKSMLEAI 238 + I Sbjct: 115 HEMAGNII 122 >gi|329901227|ref|ZP_08272752.1| Flagellar basal-body rod protein FlgB [Oxalobacteraceae bacterium IMCC9480] gi|327549159|gb|EGF33751.1| Flagellar basal-body rod protein FlgB [Oxalobacteraceae bacterium IMCC9480] Length = 150 Score = 38.7 bits (88), Expect = 0.68, Method: Composition-based stats. Identities = 11/68 (16%), Positives = 23/68 (33%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69 A QR +A N++N DT ++ + F+ + + + E Sbjct: 14 TALNLRGQRQQLIASNIANADTPNYKARDIDFNSAMKSALARSGTATGATMATAAVQPAE 73 Query: 70 VGSFISTG 77 + +T Sbjct: 74 LARTSTTH 81 >gi|323700468|ref|ZP_08112380.1| flagellar hook-associated protein FlgK [Desulfovibrio sp. ND132] gi|323460400|gb|EGB16265.1| flagellar hook-associated protein FlgK [Desulfovibrio desulfuricans ND132] Length = 669 Score = 38.7 bits (88), Expect = 0.68, Method: Composition-based stats. Identities = 6/38 (15%), Positives = 14/38 (36%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N E+ ++ Q + + +I + M + Sbjct: 629 TSEVNVDEELIELTKYQQAYEAAAQIISVTREMMETVL 666 >gi|242238966|ref|YP_002987147.1| flagellar basal-body rod protein FlgB [Dickeya dadantii Ech703] gi|242131023|gb|ACS85325.1| flagellar basal-body rod protein FlgB [Dickeya dadantii Ech703] Length = 137 Score = 38.7 bits (88), Expect = 0.68, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 18/44 (40%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54 A QR +A N++N DT G++ + F+ + Sbjct: 15 ALNLRAQRQEILAGNIANADTPGYQARDIDFANELKKAMKQGRT 58 >gi|109948141|ref|YP_665369.1| flagellar basal body rod protein FlgB [Helicobacter acinonychis str. Sheeba] gi|109715362|emb|CAK00370.1| flagellar basal-body rod protein FlgB [Helicobacter acinonychis str. Sheeba] Length = 140 Score = 38.7 bits (88), Expect = 0.68, Method: Composition-based stats. Identities = 9/29 (31%), Positives = 15/29 (51%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVG 46 R +A N++N DT +R + F V+ Sbjct: 20 RQDMIASNIANVDTPFYRPKDLDFESVLA 48 >gi|149184213|ref|ZP_01862531.1| Flagellar hook-associated protein [Erythrobacter sp. SD-21] gi|148831533|gb|EDL49966.1| Flagellar hook-associated protein [Erythrobacter sp. SD-21] Length = 446 Score = 38.7 bits (88), Expect = 0.69, Method: Composition-based stats. Identities = 23/156 (14%), Positives = 39/156 (25%), Gaps = 18/156 (11%) Query: 101 TRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGL 160 TR T G + +A LD +S E + A Sbjct: 287 TRLDTIAATLAGVVNNAQAAGVSLDGSSGQPIFAGTTAAGLRVVMSEGAGLATAPAGASA 346 Query: 161 YSVDMS------QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLE------------DS 202 S D + Q + + N+ ++G V + LE S Sbjct: 347 NSRDDANLGALRQSLAALDPAQQLSNVLFDVSSKVAGRNVTQSALETIASSARISLEQQS 406 Query: 203 NANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 + E +I Q F + + + Sbjct: 407 GVDLDTEAANLIRFQQAFQASGRAMQAASDIFNTLL 442 >gi|319781664|ref|YP_004141140.1| flagellar hook-associated protein FlgK [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167552|gb|ADV11090.1| flagellar hook-associated protein FlgK [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 484 Score = 38.7 bits (88), Expect = 0.70, Method: Composition-based stats. Identities = 7/44 (15%), Positives = 16/44 (36%), Gaps = 3/44 (6%) Query: 202 SN---ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 SN N EM ++ L + + ++ + M + + Sbjct: 441 SNATGVNVDQEMSLLLDLEHTYQASARMMKTVDDMMTALLNAVG 484 >gi|262394933|ref|YP_003286787.1| flagellar hook-associated protein FlgK [Vibrio sp. Ex25] gi|262338527|gb|ACY52322.1| flagellar hook-associated protein FlgK [Vibrio sp. Ex25] Length = 646 Score = 38.7 bits (88), Expect = 0.70, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 20/35 (57%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39 N+G + L +++L+T N+SN +T G+ V Sbjct: 6 LNVGTQSVLTAQRQLNTTGHNISNVNTEGYSRQSV 40 Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 5/38 (13%), Positives = 14/38 (36%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S N E M+ Q + + + ++ + ++ Sbjct: 607 SGVNLDEEAANMMKFQQAYMASSRVMQAANDTFNTILQ 644 >gi|182418468|ref|ZP_02949762.1| flagellar basal-body rod protein FlgB [Clostridium butyricum 5521] gi|237666504|ref|ZP_04526489.1| flagellar basal-body rod protein FlgB [Clostridium butyricum E4 str. BoNT E BL5262] gi|182377850|gb|EDT75394.1| flagellar basal-body rod protein FlgB [Clostridium butyricum 5521] gi|237657703|gb|EEP55258.1| flagellar basal-body rod protein FlgB [Clostridium butyricum E4 str. BoNT E BL5262] Length = 148 Score = 38.7 bits (88), Expect = 0.71, Method: Composition-based stats. Identities = 10/33 (30%), Positives = 17/33 (51%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 A R T+++NM+N +T ++ V F E Sbjct: 18 GLKASNLRAKTISNNMANINTKNYKKFGVVFEE 50 >gi|260774944|ref|ZP_05883845.1| flagellar hook-associated protein FlgK [Vibrio coralliilyticus ATCC BAA-450] gi|260609199|gb|EEX35357.1| flagellar hook-associated protein FlgK [Vibrio coralliilyticus ATCC BAA-450] Length = 624 Score = 38.7 bits (88), Expect = 0.71, Method: Composition-based stats. Identities = 12/79 (15%), Positives = 27/79 (34%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 N+G + L +++L+T N+SN +T G+ V + + Sbjct: 6 LNLGSQSVLTAQRQLNTTGHNISNVNTEGYSRQSVIQGANMPRQYGGETYGMGVHVEKVR 65 Query: 65 YLSKEVGSFISTGTELDFA 83 + + ++A Sbjct: 66 RSWDQFAVNEMNISTTNYA 84 Score = 36.0 bits (81), Expect = 5.1, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 13/37 (35%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N E M+ Q + + + ++ + + Sbjct: 585 SGVNLDEEAANMMKFQQAYMASSRIMQAANDTFNTIL 621 >gi|116626183|ref|YP_828339.1| flagellar hook-associated protein FlgK [Candidatus Solibacter usitatus Ellin6076] gi|116229345|gb|ABJ88054.1| flagellar hook-associated protein FlgK [Candidatus Solibacter usitatus Ellin6076] Length = 475 Score = 38.7 bits (88), Expect = 0.71, Method: Composition-based stats. Identities = 3/40 (7%), Positives = 14/40 (35%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIAS 243 + E ++ + + + + ++ AI + + Sbjct: 436 VSLDEEATTLMQFQRAYQANAKYLSVLDELTQTAIDILKT 475 >gi|288958047|ref|YP_003448388.1| flagellar basal-body rod protein [Azospirillum sp. B510] gi|288910355|dbj|BAI71844.1| flagellar basal-body rod protein [Azospirillum sp. B510] Length = 134 Score = 38.7 bits (88), Expect = 0.72, Method: Composition-based stats. Identities = 11/86 (12%), Positives = 27/86 (31%), Gaps = 3/86 (3%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDIDQKISFVASGKEYLSK 68 L QR ++ N++N DT ++ + F + + + S + Sbjct: 16 MDWLTQRQEVLSQNIANADTPEYKGRDLKPFSFRDALSDNRRLTPVATSAGHLAGTRGAG 75 Query: 69 EVGSFISTGTELDFALEGDAWFALES 94 + + A +G+ + Sbjct: 76 GMAQEQKVRDPYETAPDGNNVVLEDQ 101 >gi|254499116|ref|ZP_05111806.1| putative flagellar basal-body rod protein FlgB [Legionella drancourtii LLAP12] gi|254351655|gb|EET10500.1| putative flagellar basal-body rod protein FlgB [Legionella drancourtii LLAP12] Length = 112 Score = 38.7 bits (88), Expect = 0.72, Method: Composition-based stats. Identities = 11/38 (28%), Positives = 23/38 (60%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI 48 A A R + +A+N++N +T G++T++V F + + Sbjct: 13 ALDATLMRQTAIANNVANINTPGYQTLEVNFEQQLNEN 50 >gi|225871924|ref|YP_002753378.1| putative flagellar basal-body rod protein FlgB [Acidobacterium capsulatum ATCC 51196] gi|225793071|gb|ACO33161.1| putative flagellar basal-body rod protein FlgB [Acidobacterium capsulatum ATCC 51196] Length = 155 Score = 38.7 bits (88), Expect = 0.72, Method: Composition-based stats. Identities = 21/117 (17%), Positives = 39/117 (33%), Gaps = 3/117 (2%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFV-ASGKEYLSKEVGSFIST 76 L A NM+N DT G+RT+ F+ + ++++ + Sbjct: 21 ELKVTAQNMANVDTPGYRTVGFNFAAAMQQSVESLEERRIDRERTIAATHGLNGDGSQGA 80 Query: 77 GTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQI 133 +D A + + L R G DG+ VS + + A + + Sbjct: 81 FAAMDAASYAEPLLPASDA--VALHRVGGLLERPDGNDVSVDREGMNMAKAQLQFNM 135 >gi|313683370|ref|YP_004061108.1| flagellar basal-body rod protein flgb [Sulfuricurvum kujiense DSM 16994] gi|313156230|gb|ADR34908.1| flagellar basal-body rod protein FlgB [Sulfuricurvum kujiense DSM 16994] Length = 142 Score = 38.7 bits (88), Expect = 0.72, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 17/43 (39%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 A R ++ N++N DT +R + F + + I Sbjct: 14 NAMDYRAARQDMISGNIANADTPFYRPRDISFEDTLAQKSAQI 56 >gi|82777312|ref|YP_403661.1| flagellar basal body rod protein FlgB [Shigella dysenteriae Sd197] gi|81241460|gb|ABB62170.1| cell-proximal portion of basal-body rod [Shigella dysenteriae Sd197] Length = 138 Score = 38.7 bits (88), Expect = 0.73, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 22/62 (35%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR +A N++N DT G++ + F+ + + S VA Sbjct: 15 ALNLRAQRQEVLAANIANADTPGYQVRDIDFASELKKVMQRGRDATSVVALMMTSTQHIP 74 Query: 71 GS 72 Sbjct: 75 AQ 76 >gi|229189835|ref|ZP_04316846.1| Flagellar hook-associated protein FlgK [Bacillus cereus ATCC 10876] gi|228593643|gb|EEK51451.1| Flagellar hook-associated protein FlgK [Bacillus cereus ATCC 10876] Length = 432 Score = 38.7 bits (88), Expect = 0.74, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 32/101 (31%), Gaps = 6/101 (5%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65 N L+ LA + L T N+SN T G+ V + G K ++ Sbjct: 7 NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSA-GGSKGYAPEQRIGYGVQTLG 65 Query: 66 LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106 + + + + + F+ + L+R Sbjct: 66 VDRITDEVKTKQYN-----DQMSQFSYYAYMNSTLSRVESM 101 Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 5/34 (14%), Positives = 11/34 (32%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 N EM ++ + F + + I + Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427 >gi|224437871|ref|ZP_03658818.1| flagellar basal body rod protein FlgB [Helicobacter cinaedi CCUG 18818] gi|313144320|ref|ZP_07806513.1| flagellar basal body rod protein FlgB [Helicobacter cinaedi CCUG 18818] gi|313129351|gb|EFR46968.1| flagellar basal body rod protein FlgB [Helicobacter cinaedi CCUG 18818] Length = 144 Score = 38.7 bits (88), Expect = 0.74, Method: Composition-based stats. Identities = 9/30 (30%), Positives = 15/30 (50%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGA 47 R +A N++N DT +R V F + + Sbjct: 23 RQDMIASNIANVDTPFYRPKDVNFEQYLAR 52 >gi|150395482|ref|YP_001325949.1| flagellar basal body rod protein FlgB [Sinorhizobium medicae WSM419] gi|150026997|gb|ABR59114.1| flagellar basal body rod protein [Sinorhizobium medicae WSM419] Length = 126 Score = 38.7 bits (88), Expect = 0.74, Method: Composition-based stats. Identities = 10/36 (27%), Positives = 18/36 (50%), Gaps = 1/36 (2%) Query: 15 LEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIK 49 L R + VA N++N +T ++ V+ F V+ Sbjct: 17 LSVRQNVVAGNIANANTPHYKARDVQPFESVLQNTG 52 >gi|291334309|gb|ADD93970.1| predicted flagellar proximal rod protein [uncultured marine bacterium MedDCM-OCT-S09-C247] Length = 146 Score = 38.7 bits (88), Expect = 0.74, Method: Composition-based stats. Identities = 9/49 (18%), Positives = 20/49 (40%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50 + + A QR +A N++N+ T F+ + F ++ + Sbjct: 23 ENQLRVHAEALNLRSQRNEILASNIANSATPNFKAKDLDFEALLNSRMG 71 >gi|190573788|ref|YP_001971633.1| hypothetical protein Smlt1808 [Stenotrophomonas maltophilia K279a] gi|190011710|emb|CAQ45329.1| conserved hypothetical protein [Stenotrophomonas maltophilia K279a] Length = 99 Score = 38.7 bits (88), Expect = 0.74, Method: Composition-based stats. Identities = 9/32 (28%), Positives = 13/32 (40%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32 M I L A +Q + A N++N T Sbjct: 1 MNNVMGIALGGMRAAQQGVQVAAHNVANLATP 32 >gi|126441590|ref|YP_001057329.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei 668] gi|134283597|ref|ZP_01770296.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei 305] gi|217425071|ref|ZP_03456567.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei 576] gi|226199842|ref|ZP_03795393.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei Pakistan 9] gi|237810468|ref|YP_002894919.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei MSHR346] gi|238562529|ref|ZP_00440322.2| flagellar hook-associated protein FlgK [Burkholderia mallei GB8 horse 4] gi|251767452|ref|ZP_02267340.2| flagellar hook-associated protein 1 [Burkholderia mallei PRL-20] gi|254188065|ref|ZP_04894577.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei Pasteur 52237] gi|254201902|ref|ZP_04908266.1| flagellar hook-associated protein 1 [Burkholderia mallei FMH] gi|254207237|ref|ZP_04913588.1| flagellar hook-associated protein 1 [Burkholderia mallei JHU] gi|254295821|ref|ZP_04963278.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei 406e] gi|126221083|gb|ABN84589.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei 668] gi|134245006|gb|EBA45101.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei 305] gi|147747796|gb|EDK54872.1| flagellar hook-associated protein 1 [Burkholderia mallei FMH] gi|147752779|gb|EDK59845.1| flagellar hook-associated protein 1 [Burkholderia mallei JHU] gi|157805698|gb|EDO82868.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei 406e] gi|157935745|gb|EDO91415.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei Pasteur 52237] gi|217392091|gb|EEC32117.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei 576] gi|225928193|gb|EEH24229.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei Pakistan 9] gi|237506435|gb|ACQ98753.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei MSHR346] gi|238522496|gb|EEP85940.1| flagellar hook-associated protein FlgK [Burkholderia mallei GB8 horse 4] gi|243062745|gb|EES44931.1| flagellar hook-associated protein 1 [Burkholderia mallei PRL-20] Length = 714 Score = 38.7 bits (88), Expect = 0.74, Method: Composition-based stats. Identities = 8/72 (11%), Positives = 20/72 (27%) Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 G+V + S + + + + S N E ++ Q + + + Sbjct: 639 AGYVNAIGNAASQLKASSAAQTALVGQITQAQQSVSGVNQNEEAANLMQYQQLYQANAKV 698 Query: 227 IDENEKSMLEAI 238 I + Sbjct: 699 IQTANSVFQTVL 710 Score = 38.3 bits (87), Expect = 0.93, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 27/80 (33%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 T N+G++ A L+T N+SN T G+ + ++E G + Sbjct: 50 NTLMNLGVSGLNAALWGLTTTGQNISNAATPGYSVERPVYAEASGQYTSSGYLPQGVSTV 109 Query: 62 GKEYLSKEVGSFISTGTELD 81 E + S + Sbjct: 110 TVERQYNQYLSNQLNAAQTQ 129 >gi|330720176|gb|EGG98565.1| Flagellar basal-body rod protein FlgB [gamma proteobacterium IMCC2047] Length = 108 Score = 38.7 bits (88), Expect = 0.75, Method: Composition-based stats. Identities = 10/62 (16%), Positives = 25/62 (40%) Query: 21 TVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTEL 80 +A+N++N DT G+++ + F ++ K+D + S + + + Sbjct: 1 MLANNIANADTPGYQSRDMDFKALLMQAKSDQGVNLKRTNSRHFSTANAMETGAGLQYRT 60 Query: 81 DF 82 Sbjct: 61 PM 62 >gi|253998482|ref|YP_003050545.1| flagellar hook-associated protein FlgK [Methylovorus sp. SIP3-4] gi|253985161|gb|ACT50018.1| flagellar hook-associated protein FlgK [Methylovorus sp. SIP3-4] Length = 647 Score = 38.7 bits (88), Expect = 0.75, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 19/46 (41%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50 NIG +A A + +S +N+SN + G+ + S Sbjct: 6 LNIGKSALNAAQIGISVTGNNISNASSAGYNRQVISQSAAASQNVG 51 Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats. Identities = 5/39 (12%), Positives = 13/39 (33%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +S N E ++ Q + + ++ + I Sbjct: 607 NSGVNLDEEAANLLRYQQSYQAAAKVMQIASQMFDTLIN 645 >gi|228952118|ref|ZP_04114213.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228807650|gb|EEM54174.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 432 Score = 38.7 bits (88), Expect = 0.75, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 32/101 (31%), Gaps = 6/101 (5%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65 N L+ LA + L T N+SN T G+ V + G K ++ Sbjct: 7 NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSA-GGSKGYAPEQRIGYGVQTLG 65 Query: 66 LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106 + + + + + F+ + L+R Sbjct: 66 VDRITDEVKTKQYN-----DQMSQFSYYAYMNSTLSRVESM 101 Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 5/34 (14%), Positives = 11/34 (32%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 N EM ++ + F + + I + Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427 >gi|116619478|ref|YP_821634.1| flagellar basal-body rod protein FlgB [Candidatus Solibacter usitatus Ellin6076] gi|116222640|gb|ABJ81349.1| flagellar basal-body rod protein FlgB [Candidatus Solibacter usitatus Ellin6076] Length = 136 Score = 38.7 bits (88), Expect = 0.75, Method: Composition-based stats. Identities = 15/74 (20%), Positives = 25/74 (33%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 L R VA N++N DT G+ T + F + + Q + +V Sbjct: 39 MDLLSARQKLVASNIANADTPGYLTQDLDFQAELRNASGRMPQVSGVAGLKIKNDGNDVS 98 Query: 72 SFISTGTELDFALE 85 + + AL Sbjct: 99 LDRESRLLAENALR 112 >gi|42526721|ref|NP_971819.1| flagellar basal-body rod protein FlgB [Treponema denticola ATCC 35405] gi|41817036|gb|AAS11730.1| flagellar basal-body rod protein FlgB [Treponema denticola ATCC 35405] gi|325473783|gb|EGC76971.1| FlgB protein [Treponema denticola F0402] Length = 139 Score = 38.7 bits (88), Expect = 0.75, Method: Composition-based stats. Identities = 8/72 (11%), Positives = 22/72 (30%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A R + ++N++N+D F+ +V F + + + Sbjct: 16 ALDVNSLRYTVTSNNLANSDVPNFKRTEVNFESELKRAFDSEKNAKGAFQLATTHPLHIK 75 Query: 71 GSFISTGTELDF 82 + ++ Sbjct: 76 SNEPIDYKTVEP 87 >gi|260779350|ref|ZP_05888242.1| flagellar basal-body rod protein FlgB [Vibrio coralliilyticus ATCC BAA-450] gi|260605514|gb|EEX31809.1| flagellar basal-body rod protein FlgB [Vibrio coralliilyticus ATCC BAA-450] Length = 120 Score = 38.7 bits (88), Expect = 0.76, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 28/85 (32%), Gaps = 1/85 (1%) Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76 QR +A N++N DT G+ + F+ V+ + + + Sbjct: 21 QRTKVLASNLANVDTPGYLAKDLSFTTVMNQL-SPHGVNKPVPKLQVSSMYSIPYQNSKD 79 Query: 77 GTELDFALEGDAWFALESPRGIILT 101 G ++ +E + LT Sbjct: 80 GNTVELGVEQGKFTQNNMDFQTSLT 104 >gi|152975150|ref|YP_001374667.1| flagellar hook-associated protein FlgK [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152023902|gb|ABS21672.1| flagellar hook-associated protein FlgK [Bacillus cytotoxicus NVH 391-98] Length = 440 Score = 38.7 bits (88), Expect = 0.76, Method: Composition-based stats. Identities = 5/34 (14%), Positives = 11/34 (32%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 N EM ++ + F + + I + Sbjct: 402 VNMEEEMVNLMAFQKYFVANSKAISTMNEVFDSL 435 Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 24/53 (45%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 N L+ LA + L T N++N T G+ V + V N +Q+I + Sbjct: 7 NTPLSGMLAAQVGLKTTQQNLTNIHTPGYVRQAVNYGSVGANNGNTPEQRIGY 59 >gi|313200557|ref|YP_004039215.1| flagellar hook-associated protein flgk [Methylovorus sp. MP688] gi|312439873|gb|ADQ83979.1| flagellar hook-associated protein FlgK [Methylovorus sp. MP688] Length = 647 Score = 38.7 bits (88), Expect = 0.76, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 19/46 (41%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50 NIG +A A + +S +N+SN + G+ + S Sbjct: 6 LNIGKSALNAAQIGISVTGNNISNASSAGYNRQVISQSAAASQNVG 51 Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats. Identities = 5/39 (12%), Positives = 13/39 (33%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +S N E ++ Q + + ++ + I Sbjct: 607 NSGVNLDEEAANLLRYQQSYQAAAKVMQIASQMFDTLIN 645 >gi|229149940|ref|ZP_04278168.1| Flagellar hook-associated protein FlgK [Bacillus cereus m1550] gi|228633621|gb|EEK90222.1| Flagellar hook-associated protein FlgK [Bacillus cereus m1550] Length = 432 Score = 38.7 bits (88), Expect = 0.76, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 32/101 (31%), Gaps = 6/101 (5%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65 N L+ LA + L T N+SN T G+ V + G K ++ Sbjct: 7 NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSA-GGSKGYAPEQRIGYGVQTLG 65 Query: 66 LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106 + + + + + F+ + L+R Sbjct: 66 VDRITDEVKTKQYN-----DQMSQFSYYAYMNSTLSRVESM 101 Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 5/34 (14%), Positives = 11/34 (32%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 N EM ++ + F + + I + Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427 >gi|146305248|ref|YP_001185713.1| flagellar basal body rod protein FlgC [Pseudomonas mendocina ymp] gi|145573449|gb|ABP82981.1| flagellar basal-body rod protein FlgC [Pseudomonas mendocina ymp] Length = 142 Score = 38.7 bits (88), Expect = 0.76, Method: Composition-based stats. Identities = 6/43 (13%), Positives = 21/43 (48%) Query: 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 +G++ ++ + + EM M+ T+ F + +++ + + Sbjct: 95 QGYVFYADIDQIEEMTDMMSATRSFETSVEVLNRLKSMQQGLL 137 >gi|254182133|ref|ZP_04888730.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei 1655] gi|184212671|gb|EDU09714.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei 1655] Length = 714 Score = 38.7 bits (88), Expect = 0.77, Method: Composition-based stats. Identities = 8/72 (11%), Positives = 20/72 (27%) Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 G+V + S + + + + S N E ++ Q + + + Sbjct: 639 AGYVNAIGNAASQLKASSAAQTALVGQITQAQQSVSGVNQNEEAANLMQYQQLYQANAKV 698 Query: 227 IDENEKSMLEAI 238 I + Sbjct: 699 IQTANSVFQTVL 710 Score = 38.3 bits (87), Expect = 0.95, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 27/80 (33%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 T N+G++ A L+T N+SN T G+ + ++E G + Sbjct: 50 NTLMNLGVSGLNAALWGLTTTGQNISNAATPGYSVERPVYAEASGQYTSSGYLPQGVSTV 109 Query: 62 GKEYLSKEVGSFISTGTELD 81 E + S + Sbjct: 110 TVERQYNQYLSNQLNAAQTQ 129 >gi|170768328|ref|ZP_02902781.1| flagellar basal-body rod protein FlgB [Escherichia albertii TW07627] gi|170123094|gb|EDS92025.1| flagellar basal-body rod protein FlgB [Escherichia albertii TW07627] Length = 138 Score = 38.7 bits (88), Expect = 0.77, Method: Composition-based stats. Identities = 11/62 (17%), Positives = 21/62 (33%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR +A N++N DT ++ + F+ + + + VA Sbjct: 15 ALNLRAQRQEVLAANIANADTPAYQARDIDFASELKRVMQRRRDETRVVALTLTSTQHIP 74 Query: 71 GS 72 Sbjct: 75 AQ 76 >gi|163794165|ref|ZP_02188138.1| hypothetical protein BAL199_02089 [alpha proteobacterium BAL199] gi|159180779|gb|EDP65298.1| hypothetical protein BAL199_02089 [alpha proteobacterium BAL199] Length = 476 Score = 38.7 bits (88), Expect = 0.77, Method: Composition-based stats. Identities = 3/33 (9%), Positives = 13/33 (39%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGF 34 + + A + ++ + N+++ G+ Sbjct: 4 LNAIYSASSGIAAAQAKIDVASRNIASASVEGY 36 >gi|71906388|ref|YP_283975.1| flagellar basal-body rod protein FlgB [Dechloromonas aromatica RCB] gi|71846009|gb|AAZ45505.1| Flagellar basal-body rod protein FlgB [Dechloromonas aromatica RCB] Length = 135 Score = 38.7 bits (88), Expect = 0.77, Method: Composition-based stats. Identities = 10/56 (17%), Positives = 18/56 (32%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66 A QR +A N++N DT ++ F + +A+ Sbjct: 14 AMNLRTQRHQVLASNIANADTPNYKARDFSFESAMQNAMAGRGNGSVALATTSSGH 69 >gi|114320054|ref|YP_741737.1| flagellar basal-body rod protein FlgB [Alkalilimnicola ehrlichii MLHE-1] gi|114226448|gb|ABI56247.1| flagellar basal-body rod protein FlgB [Alkalilimnicola ehrlichii MLHE-1] Length = 134 Score = 38.7 bits (88), Expect = 0.77, Method: Composition-based stats. Identities = 10/54 (18%), Positives = 21/54 (38%), Gaps = 2/54 (3%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 A +L +A N++N DT ++ + F + A + Q + + Sbjct: 17 RLRAERSQL--LASNIANADTPHYKAQDMDFQAAMRAAEGKQAQPLQATHAKHF 68 >gi|330818588|ref|YP_004362293.1| flagellar basal-body rod protein FlgB [Burkholderia gladioli BSR3] gi|327370981|gb|AEA62337.1| flagellar basal-body rod protein FlgB [Burkholderia gladioli BSR3] Length = 162 Score = 38.7 bits (88), Expect = 0.79, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 17/41 (41%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51 A R ++ N++N DT G++ V F +G Sbjct: 15 ALDVRAYRQELLSSNIANADTPGYQARDVDFGATLGRALKQ 55 >gi|229043492|ref|ZP_04191202.1| Flagellar hook-associated protein FlgK [Bacillus cereus AH676] gi|228725870|gb|EEL77117.1| Flagellar hook-associated protein FlgK [Bacillus cereus AH676] Length = 432 Score = 38.7 bits (88), Expect = 0.79, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 32/101 (31%), Gaps = 6/101 (5%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65 N L+ LA + L T N+SN T G+ V + G K ++ Sbjct: 7 NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSA-GGSKGYAPEQRIGYGVQTLG 65 Query: 66 LSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRF 106 + + + + + F+ + L+R Sbjct: 66 VDRITDEVKTKQYN-----DQMSQFSYYAYMNSTLSRVESM 101 Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 5/34 (14%), Positives = 11/34 (32%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 N EM ++ + F + + I + Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427 >gi|323178496|gb|EFZ64074.1| flagellar basal-body rod protein FlgC [Escherichia coli 1180] Length = 130 Score = 38.7 bits (88), Expect = 0.80, Method: Composition-based stats. Identities = 4/35 (11%), Positives = 15/35 (42%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 N + +M M+ ++ F + +++ + + Sbjct: 91 VNVVEQMADMMSASRDFETNVDVLNNVKSMQQSLL 125 Score = 36.0 bits (81), Expect = 4.5, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 17/40 (42%), Gaps = 6/40 (15%) Query: 12 QLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVV 45 A RL+TVA N++N + ++ F+ V Sbjct: 1 MTAQTLRLNTVASNLANANAPASSEAQAYKARSPVFAAVY 40 >gi|167917171|ref|ZP_02504262.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei BCC215] Length = 667 Score = 38.7 bits (88), Expect = 0.80, Method: Composition-based stats. Identities = 8/72 (11%), Positives = 20/72 (27%) Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 G+V + S + + + + S N E ++ Q + + + Sbjct: 592 AGYVNAIGNAASQLKASSAAQTALVGQITQAQQSVSGVNQNEEAANLMQYQQLYQANAKV 651 Query: 227 IDENEKSMLEAI 238 I + Sbjct: 652 IQTANSVFQTVL 663 Score = 38.3 bits (87), Expect = 1.0, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 27/80 (33%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 T N+G++ A L+T N+SN T G+ + ++E G + Sbjct: 3 NTLMNLGVSGLNAALWGLTTTGQNISNAATPGYSVERPVYAEASGQYTSSGYLPQGVSTV 62 Query: 62 GKEYLSKEVGSFISTGTELD 81 E + S + Sbjct: 63 TVERQYNQYLSNQLNAAQTQ 82 >gi|313620054|gb|EFR91569.1| flagellar basal-body rod protein FlgC [Listeria innocua FSL S4-378] Length = 121 Score = 38.7 bits (88), Expect = 0.81, Method: Composition-based stats. Identities = 8/30 (26%), Positives = 15/30 (50%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTD 30 M N +A A +Q + ++N++N D Sbjct: 1 MFEGINTSGSALNAAKQWMEVSSNNIANAD 30 Score = 37.2 bits (84), Expect = 2.1, Method: Composition-based stats. Identities = 5/32 (15%), Positives = 16/32 (50%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLID 228 G++ +N + EM ++ + + + T+ + Sbjct: 90 GYVNYANVDMTAEMTNLMVGQKMYAANTSALQ 121 >gi|270262404|ref|ZP_06190675.1| flagellar basal-body rod protein FlgB [Serratia odorifera 4Rx13] gi|270043088|gb|EFA16181.1| flagellar basal-body rod protein FlgB [Serratia odorifera 4Rx13] Length = 137 Score = 38.7 bits (88), Expect = 0.81, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 23/65 (35%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR +A N++N DT G++ + F+ + + S +A Sbjct: 15 ALNLRAQRQEILAANIANADTPGYQARDIDFAGQLNKVLAQGRVSGSGIALNMTSARHIP 74 Query: 71 GSFIS 75 + Sbjct: 75 AQNMQ 79 >gi|226939377|ref|YP_002794450.1| FlgB [Laribacter hongkongensis HLHK9] gi|226714303|gb|ACO73441.1| FlgB [Laribacter hongkongensis HLHK9] Length = 154 Score = 38.7 bits (88), Expect = 0.81, Method: Composition-based stats. Identities = 9/67 (13%), Positives = 24/67 (35%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A +R +A N++N DT ++ + F++ + + + ++ Sbjct: 32 ALGLHARRNEVIASNIANADTPNYKAVDFDFAKAMKSALAGDSRSSLALSQTDNRHLAGK 91 Query: 71 GSFISTG 77 + T Sbjct: 92 QTQQGTD 98 >gi|76809667|ref|YP_331888.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei 1710b] gi|167892419|ref|ZP_02479821.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei 7894] gi|167909135|ref|ZP_02496226.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei 112] gi|76579120|gb|ABA48595.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei 1710b] Length = 667 Score = 38.7 bits (88), Expect = 0.81, Method: Composition-based stats. Identities = 8/72 (11%), Positives = 20/72 (27%) Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 G+V + S + + + + S N E ++ Q + + + Sbjct: 592 AGYVNAIGNAASQLKASSAAQTALVGQITQAQQSVSGVNQNEEAANLMQYQQLYQANAKV 651 Query: 227 IDENEKSMLEAI 238 I + Sbjct: 652 IQTANSVFQTVL 663 Score = 38.3 bits (87), Expect = 0.99, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 27/80 (33%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 T N+G++ A L+T N+SN T G+ + ++E G + Sbjct: 3 NTLMNLGVSGLNAALWGLTTTGQNISNAATPGYSVERPVYAEASGQYTSSGYLPQGVSTV 62 Query: 62 GKEYLSKEVGSFISTGTELD 81 E + S + Sbjct: 63 TVERQYNQYLSNQLNAAQTQ 82 >gi|53717921|ref|YP_106907.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei K96243] gi|53724572|ref|YP_104805.1| flagellar hook-associated protein FlgK [Burkholderia mallei ATCC 23344] gi|121601252|ref|YP_994298.1| flagellar hook-associated protein FlgK [Burkholderia mallei SAVP1] gi|124385698|ref|YP_001028053.1| flagellar hook-associated protein FlgK [Burkholderia mallei NCTC 10229] gi|126448312|ref|YP_001082860.1| flagellar hook-associated protein FlgK [Burkholderia mallei NCTC 10247] gi|126451511|ref|YP_001064571.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei 1106a] gi|167717670|ref|ZP_02400906.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei DM98] gi|167736711|ref|ZP_02409485.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei 14] gi|167813810|ref|ZP_02445490.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei 91] gi|167822327|ref|ZP_02453798.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei 9] gi|167843917|ref|ZP_02469425.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei B7210] gi|167900916|ref|ZP_02488121.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei NCTC 13177] gi|242314954|ref|ZP_04813970.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei 1106b] gi|254174885|ref|ZP_04881546.1| flagellar hook-associated protein 1 [Burkholderia mallei ATCC 10399] gi|254197004|ref|ZP_04903428.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei S13] gi|254359739|ref|ZP_04976010.1| flagellar hook-associated protein 1 [Burkholderia mallei 2002721280] gi|52208335|emb|CAH34268.1| putative flagellar hook-associated protein [Burkholderia pseudomallei K96243] gi|52427995|gb|AAU48588.1| flagellar hook-associated protein 1 [Burkholderia mallei ATCC 23344] gi|121230062|gb|ABM52580.1| flagellar hook-associated protein 1 [Burkholderia mallei SAVP1] gi|124293718|gb|ABN02987.1| flagellar hook-associated protein FlgK [Burkholderia mallei NCTC 10229] gi|126225153|gb|ABN88693.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei 1106a] gi|126241182|gb|ABO04275.1| flagellar hook-associated protein FlgK [Burkholderia mallei NCTC 10247] gi|148028953|gb|EDK86885.1| flagellar hook-associated protein 1 [Burkholderia mallei 2002721280] gi|160695930|gb|EDP85900.1| flagellar hook-associated protein 1 [Burkholderia mallei ATCC 10399] gi|169653747|gb|EDS86440.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei S13] gi|242138193|gb|EES24595.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei 1106b] Length = 667 Score = 38.7 bits (88), Expect = 0.81, Method: Composition-based stats. Identities = 8/72 (11%), Positives = 20/72 (27%) Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 G+V + S + + + + S N E ++ Q + + + Sbjct: 592 AGYVNAIGNAASQLKASSAAQTALVGQITQAQQSVSGVNQNEEAANLMQYQQLYQANAKV 651 Query: 227 IDENEKSMLEAI 238 I + Sbjct: 652 IQTANSVFQTVL 663 Score = 38.3 bits (87), Expect = 1.0, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 27/80 (33%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 T N+G++ A L+T N+SN T G+ + ++E G + Sbjct: 3 NTLMNLGVSGLNAALWGLTTTGQNISNAATPGYSVERPVYAEASGQYTSSGYLPQGVSTV 62 Query: 62 GKEYLSKEVGSFISTGTELD 81 E + S + Sbjct: 63 TVERQYNQYLSNQLNAAQTQ 82 >gi|187926957|ref|YP_001893302.1| flagellar basal-body rod protein FlgB [Ralstonia pickettii 12J] gi|241665286|ref|YP_002983645.1| flagellar basal-body rod protein FlgB [Ralstonia pickettii 12D] gi|187728711|gb|ACD29875.1| flagellar basal-body rod protein FlgB [Ralstonia pickettii 12J] gi|240867313|gb|ACS64973.1| flagellar basal-body rod protein FlgB [Ralstonia pickettii 12D] Length = 151 Score = 38.3 bits (87), Expect = 0.83, Method: Composition-based stats. Identities = 11/78 (14%), Positives = 22/78 (28%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR +A N++N DT ++ F + + + Sbjct: 15 ALRLRSQRHQILASNIANADTPNYKARDFDFQSALQKAVGQQSGNSLPMTATAAGHLTVD 74 Query: 71 GSFISTGTELDFALEGDA 88 G+ + +L Sbjct: 75 GAPAGEVALMQASLSQQT 92 >gi|119899021|ref|YP_934234.1| flagellar hook-filament junction protein 1 [Azoarcus sp. BH72] gi|119671434|emb|CAL95347.1| flagellar hook-filament junction protein 1 [Azoarcus sp. BH72] Length = 663 Score = 38.3 bits (87), Expect = 0.83, Method: Composition-based stats. Identities = 12/39 (30%), Positives = 17/39 (43%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39 M NIGL A + +L T N++N G+ V Sbjct: 1 MAGLLNIGLTGLNAAQAQLLTTGHNITNAGVEGYHRQTV 39 >gi|301646811|ref|ZP_07246663.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 146-1] gi|307136856|ref|ZP_07496212.1| flagellar basal body rod protein FlgC [Escherichia coli H736] gi|331640711|ref|ZP_08341858.1| flagellar basal-body rod protein FlgC [Escherichia coli H736] gi|301075004|gb|EFK89810.1| flagellar basal-body rod protein FlgC [Escherichia coli MS 146-1] gi|315616829|gb|EFU97446.1| flagellar basal-body rod protein FlgC [Escherichia coli 3431] gi|331040085|gb|EGI12293.1| flagellar basal-body rod protein FlgC [Escherichia coli H736] Length = 143 Score = 38.3 bits (87), Expect = 0.84, Method: Composition-based stats. Identities = 4/35 (11%), Positives = 15/35 (42%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 N + +M M+ ++ F + +++ + + Sbjct: 104 VNVVEQMADMMSASRDFETNVDVLNNVKSMQQSLL 138 Score = 36.0 bits (81), Expect = 4.4, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 6/45 (13%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVV 45 I +A A RL+TVA N++N + ++ F+ V Sbjct: 9 ISGSAMTAQTIRLNTVASNLANAEAPAGSEAQAYKARSPVFAAVY 53 >gi|254258855|ref|ZP_04949909.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei 1710a] gi|254217544|gb|EET06928.1| flagellar hook-associated protein FlgK [Burkholderia pseudomallei 1710a] Length = 419 Score = 38.3 bits (87), Expect = 0.84, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 27/80 (33%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 T N+G++ A L+T N+SN T G+ + ++E G + Sbjct: 3 NTLMNLGVSGLNAALWGLTTTGQNISNAATPGYSVERPVYAEASGQYTSSGYLPQGVSTV 62 Query: 62 GKEYLSKEVGSFISTGTELD 81 E + S + Sbjct: 63 TVERQYNQYLSNQLNAAQTQ 82 >gi|260466602|ref|ZP_05812790.1| flagellar hook-associated protein FlgK [Mesorhizobium opportunistum WSM2075] gi|259029608|gb|EEW30896.1| flagellar hook-associated protein FlgK [Mesorhizobium opportunistum WSM2075] Length = 470 Score = 38.3 bits (87), Expect = 0.84, Method: Composition-based stats. Identities = 8/44 (18%), Positives = 16/44 (36%), Gaps = 3/44 (6%) Query: 202 SN---ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 SN N EM M+ L + + ++ + M + + Sbjct: 427 SNATGVNIDQEMSLMLDLEHTYQASARMMKTVDDMMTALLSAVG 470 >gi|254755230|ref|ZP_05207264.1| flagellar hook-associated protein FlgK [Bacillus anthracis str. Vollum] Length = 239 Score = 38.3 bits (87), Expect = 0.86, Method: Composition-based stats. Identities = 5/34 (14%), Positives = 11/34 (32%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 N EM ++ + F + + I + Sbjct: 201 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 234 >gi|229155309|ref|ZP_04283420.1| Flagellar hook-associated protein FlgK [Bacillus cereus ATCC 4342] gi|228628234|gb|EEK84950.1| Flagellar hook-associated protein FlgK [Bacillus cereus ATCC 4342] Length = 432 Score = 38.3 bits (87), Expect = 0.86, Method: Composition-based stats. Identities = 5/34 (14%), Positives = 11/34 (32%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 N EM ++ + F + + I + Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427 Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 23/53 (43%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 N L+ LA + L T N+SN T G+ V + + +QKI + Sbjct: 7 NTPLSGLLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSAGASQGYSPEQKIGY 59 >gi|148976391|ref|ZP_01813097.1| flagellar basal-body rod protein B [Vibrionales bacterium SWAT-3] gi|145964214|gb|EDK29470.1| flagellar basal-body rod protein B [Vibrionales bacterium SWAT-3] Length = 131 Score = 38.3 bits (87), Expect = 0.86, Method: Composition-based stats. Identities = 6/38 (15%), Positives = 18/38 (47%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 E+ ++ N++ +T G++ + F + + A + Sbjct: 20 ERNAEVLSTNIAQANTPGYKAKGLDFKKSLQAASSGAS 57 >gi|330818578|ref|YP_004362283.1| flagellar hook-associated protein FlgK [Burkholderia gladioli BSR3] gi|327370971|gb|AEA62327.1| flagellar hook-associated protein FlgK [Burkholderia gladioli BSR3] Length = 661 Score = 38.3 bits (87), Expect = 0.86, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 32/83 (38%), Gaps = 1/83 (1%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA-IKNDIDQKISFVAS 61 N+GL+ A ++T N+SN T G+ + F+E G N + Sbjct: 4 NLLNLGLSGINAALWGINTTGQNISNQATPGYSVERPVFAESDGQYTPNGFSPSGVTTVT 63 Query: 62 GKEYLSKEVGSFISTGTELDFAL 84 + S+ + +++ AL Sbjct: 64 VQRQFSQYLSDQLNSANTTASAL 86 Score = 37.5 bits (85), Expect = 1.7, Method: Composition-based stats. Identities = 10/85 (11%), Positives = 23/85 (27%), Gaps = 8/85 (9%) Query: 162 SVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLED--------SNANSMYEMGQM 213 + D + S N+ + +V+ G + S N E + Sbjct: 573 AFDGGSTTLSAAYSSYVNNVGNAAASLSARSSVQAGVVSQITTQQQSVSGVNQNEEAVNL 632 Query: 214 IHLTQKFNSITTLIDENEKSMLEAI 238 + Q + + +I + Sbjct: 633 MQYQQMYQANAKVIQTASTLFSTLL 657 >gi|229195951|ref|ZP_04322704.1| Flagellar hook-associated protein FlgK [Bacillus cereus m1293] gi|228587510|gb|EEK45575.1| Flagellar hook-associated protein FlgK [Bacillus cereus m1293] Length = 420 Score = 38.3 bits (87), Expect = 0.86, Method: Composition-based stats. Identities = 5/34 (14%), Positives = 11/34 (32%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 N EM ++ + F + + I + Sbjct: 382 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 415 >gi|221215578|ref|ZP_03588541.1| flagellar hook-associated protein FlgK [Burkholderia multivorans CGD1] gi|221164566|gb|EED97049.1| flagellar hook-associated protein FlgK [Burkholderia multivorans CGD1] Length = 698 Score = 38.3 bits (87), Expect = 0.86, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 23/51 (45%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 T N+G++ A L+T N+SN T G+ + ++E G + Sbjct: 42 NTLMNLGVSGLNAALWGLTTTGQNISNAATPGYSVERPVYAEASGQYTSSG 92 Score = 36.0 bits (81), Expect = 4.1, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 11/37 (29%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N E ++ Q + + +I + Sbjct: 658 SGVNQNEEAANLMQYQQLYQANAKVIQTAATLFQTVL 694 >gi|228964721|ref|ZP_04125828.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis serovar sotto str. T04001] gi|228794971|gb|EEM42470.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis serovar sotto str. T04001] Length = 139 Score = 38.3 bits (87), Expect = 0.87, Method: Composition-based stats. Identities = 5/34 (14%), Positives = 11/34 (32%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 N EM ++ + F + + I + Sbjct: 101 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 134 >gi|228984822|ref|ZP_04144994.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228775020|gb|EEM23414.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 432 Score = 38.3 bits (87), Expect = 0.87, Method: Composition-based stats. Identities = 5/34 (14%), Positives = 11/34 (32%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 N EM ++ + F + + I + Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427 Score = 37.5 bits (85), Expect = 1.7, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 23/53 (43%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 N L+ LA + L T N+SN T G+ V + + +QKI + Sbjct: 7 NTPLSGLLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSAGASHGYSPEQKIGY 59 >gi|222084862|ref|YP_002543391.1| flagellar basal-body rod protein [Agrobacterium radiobacter K84] gi|221722310|gb|ACM25466.1| flagellar basal-body rod protein [Agrobacterium radiobacter K84] Length = 130 Score = 38.3 bits (87), Expect = 0.87, Method: Composition-based stats. Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 1/39 (2%) Query: 15 LEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIKNDI 52 L+ R VA N++N +T FR V F V+ + Sbjct: 17 LQTRQEVVAGNIANANTPKFRAKDVTPFQAVLDNQNVGM 55 >gi|206974984|ref|ZP_03235899.1| putative flagellar hook-associated protein [Bacillus cereus H3081.97] gi|206747003|gb|EDZ58395.1| putative flagellar hook-associated protein [Bacillus cereus H3081.97] Length = 415 Score = 38.3 bits (87), Expect = 0.87, Method: Composition-based stats. Identities = 5/34 (14%), Positives = 11/34 (32%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 N EM ++ + F + + I + Sbjct: 377 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 410 >gi|86136708|ref|ZP_01055286.1| flagellar hook-associated protein [Roseobacter sp. MED193] gi|85826032|gb|EAQ46229.1| flagellar hook-associated protein [Roseobacter sp. MED193] Length = 471 Score = 38.3 bits (87), Expect = 0.87, Method: Composition-based stats. Identities = 5/36 (13%), Positives = 16/36 (44%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +S E+ M+ + + + ++ ++ M +R Sbjct: 435 VDSDAELQNMMLIENAYAANAKMLSAIDEMMQTLLR 470 >gi|229138438|ref|ZP_04267027.1| Flagellar hook-associated protein FlgK [Bacillus cereus BDRD-ST26] gi|228644975|gb|EEL01218.1| Flagellar hook-associated protein FlgK [Bacillus cereus BDRD-ST26] Length = 420 Score = 38.3 bits (87), Expect = 0.89, Method: Composition-based stats. Identities = 5/34 (14%), Positives = 11/34 (32%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 N EM ++ + F + + I + Sbjct: 382 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 415 >gi|114798876|ref|YP_758980.1| flagellar hook-associated protein FlgK [Hyphomonas neptunium ATCC 15444] gi|114739050|gb|ABI77175.1| flagellar hook-associated protein FlgK [Hyphomonas neptunium ATCC 15444] Length = 483 Score = 38.3 bits (87), Expect = 0.89, Method: Composition-based stats. Identities = 9/46 (19%), Positives = 18/46 (39%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK 49 + + Q+ VA N++N T G+ + E+V + Sbjct: 6 AILAARSGLQVTSQKAEIVATNVANASTPGYVRRSLVVGELVNGSQ 51 >gi|115353111|ref|YP_774950.1| flagellar hook-associated protein FlgK [Burkholderia ambifaria AMMD] gi|115283099|gb|ABI88616.1| flagellar hook-associated protein FlgK [Burkholderia ambifaria AMMD] Length = 665 Score = 38.3 bits (87), Expect = 0.89, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 25/69 (36%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 T N+G++ A L+T N+SN T G+ + ++E G + Sbjct: 3 NTLMNLGVSGLNAALWGLTTTGQNISNAATPGYSVERPVYAEASGQYTSSGYMPQGVNTV 62 Query: 62 GKEYLSKEV 70 + + Sbjct: 63 TVQRQYSQY 71 Score = 36.0 bits (81), Expect = 4.5, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 11/37 (29%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N E ++ Q + + +I + Sbjct: 625 SGVNQNEEAANLMQYQQLYQANAKVIQTAATLFQTVL 661 >gi|283784083|ref|YP_003363948.1| lateral flagellar basal-body rod protein [Citrobacter rodentium ICC168] gi|282947537|emb|CBG87089.1| lateral flagellar basal-body rod protein [Citrobacter rodentium ICC168] Length = 143 Score = 38.3 bits (87), Expect = 0.89, Method: Composition-based stats. Identities = 5/42 (11%), Positives = 19/42 (45%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ + N + +M M+ ++ F + +++ + + Sbjct: 97 GYVWYPDVNVVEQMADMMSASRDFETNVDVLNNVKSMQQSLL 138 Score = 35.2 bits (79), Expect = 7.2, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 20/52 (38%), Gaps = 6/52 (11%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDI 52 I +A A RL+TVA N++N + ++ F+ V Sbjct: 9 ISGSAMTAQTIRLNTVASNLANAEAPASSEAQAYKARSPVFAAVYNNSLTGA 60 >gi|295706288|ref|YP_003599363.1| flagellar basal-body rod protein FlgB [Bacillus megaterium DSM 319] gi|294803947|gb|ADF41013.1| flagellar basal-body rod protein FlgB [Bacillus megaterium DSM 319] Length = 129 Score = 38.3 bits (87), Expect = 0.90, Method: Composition-based stats. Identities = 12/95 (12%), Positives = 29/95 (30%), Gaps = 4/95 (4%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKV----KFSEVVGAIKNDIDQKISFVASGKEY 65 Q+ T+A N++N DT +++ V +F +++ + Sbjct: 13 NGISYASQKQQTIAQNIANVDTPNYKSKTVTRTSEFRDLLHNELEAYQTDSKHIPFSDSS 72 Query: 66 LSKEVGSFISTGTELDFALEGDAWFALESPRGIIL 100 ++ ++ D A + I Sbjct: 73 QRVITQQGNTSYQANGNNVDMDKEMADMAENQIYY 107 >gi|333008275|gb|EGK27749.1| flagellar basal-body rod protein flgC [Shigella flexneri K-272] Length = 90 Score = 38.3 bits (87), Expect = 0.91, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 6/46 (13%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKF 41 F+I +A A QRL+ A N++N G +R +V F Sbjct: 4 LNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRAKQVVF 49 >gi|221199746|ref|ZP_03572789.1| flagellar hook-associated protein FlgK [Burkholderia multivorans CGD2M] gi|221208649|ref|ZP_03581649.1| flagellar hook-associated protein FlgK [Burkholderia multivorans CGD2] gi|221171460|gb|EEE03907.1| flagellar hook-associated protein FlgK [Burkholderia multivorans CGD2] gi|221179985|gb|EEE12389.1| flagellar hook-associated protein FlgK [Burkholderia multivorans CGD2M] Length = 698 Score = 38.3 bits (87), Expect = 0.91, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 23/51 (45%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 T N+G++ A L+T N+SN T G+ + ++E G + Sbjct: 42 NTLMNLGVSGLNAALWGLTTTGQNISNAATPGYSVERPVYAEASGQYTSSG 92 Score = 36.0 bits (81), Expect = 4.2, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 11/37 (29%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N E ++ Q + + +I + Sbjct: 658 SGVNQNEEAANLMQYQQLYQANAKVIQTAATLFQTVL 694 >gi|167585191|ref|ZP_02377579.1| flagellar basal body rod protein FlgB [Burkholderia ubonensis Bu] Length = 162 Score = 38.3 bits (87), Expect = 0.91, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 19/43 (44%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 A R ++ N++N DT G++ V FS + ++ Sbjct: 15 ALDVRAYRQELLSSNIANADTPGYQARDVDFSSTLARSLKQVN 57 >gi|15606764|ref|NP_214144.1| flagellar hook associated protein FlgK [Aquifex aeolicus VF5] gi|2983977|gb|AAC07523.1| flagellar hook associated protein FlgK [Aquifex aeolicus VF5] Length = 426 Score = 38.3 bits (87), Expect = 0.91, Method: Composition-based stats. Identities = 3/41 (7%), Positives = 17/41 (41%) Query: 199 LEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 LE + E +++ + + + ++ ++ ++ + Sbjct: 384 LERQGVSIDQEFMEIMQIQKNYEAVAKILPRIDEMFRTLLN 424 >gi|300870953|ref|YP_003785824.1| flagellar hook associated protein FlgK [Brachyspira pilosicoli 95/1000] gi|300688652|gb|ADK31323.1| flagellar hook associated protein, FlgK [Brachyspira pilosicoli 95/1000] Length = 637 Score = 38.3 bits (87), Expect = 0.92, Method: Composition-based stats. Identities = 11/71 (15%), Positives = 24/71 (33%), Gaps = 5/71 (7%) Query: 177 ISPNIPPTPLEDLSGVTVKRGFLED-----SNANSMYEMGQMIHLTQKFNSITTLIDENE 231 + T + T+ +LE S N E+ QM +N+ ++ + Sbjct: 566 QIASRTETANSESEKQTIVMEYLEKLRQSVSGVNLDEEVAQMAMYQHGYNASARVVSVMD 625 Query: 232 KSMLEAIRNIA 242 + + I + Sbjct: 626 QLLDVVINRMG 636 >gi|254723815|ref|ZP_05185601.1| flagellar hook-associated protein FlgK [Bacillus anthracis str. A1055] Length = 432 Score = 38.3 bits (87), Expect = 0.92, Method: Composition-based stats. Identities = 5/34 (14%), Positives = 11/34 (32%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 N EM ++ + F + + I + Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427 Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 23/53 (43%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 N L+ LA + L T N+SN T G+ V + + +QKI + Sbjct: 7 NTPLSGLLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSAGASQGYSPEQKIGY 59 >gi|91224201|ref|ZP_01259464.1| flagellar basal-body rod protein C [Vibrio alginolyticus 12G01] gi|91191112|gb|EAS77378.1| flagellar basal-body rod protein C [Vibrio alginolyticus 12G01] Length = 144 Score = 38.3 bits (87), Expect = 0.92, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 19/43 (44%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ + + + EM M+ T+ F + ++ + +R Sbjct: 97 GYVFYPDIDVVAEMADMMSATRSFETNVEVLANVKSMQQGLLR 139 Score = 35.2 bits (79), Expect = 8.1, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 34/96 (35%), Gaps = 6/96 (6%) Query: 10 AAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +A A RL+TVA N++N D V ++ +K F+ V + + A + Sbjct: 12 SAMTAQTVRLNTVASNLANADAVSANPEDAYKALKPVFATVYQKTQMTTENGAYPNAEVR 71 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 + E + L D + ++ Sbjct: 72 IVDVVKNAGDAEKRFEPNNPLANDEGYVFYPDIDVV 107 >gi|83716884|ref|YP_438386.1| flagellar basal-body rod protein FlgB [Burkholderia thailandensis E264] gi|167614834|ref|ZP_02383469.1| flagellar basal-body rod protein FlgB [Burkholderia thailandensis Bt4] gi|83650709|gb|ABC34773.1| flagellar basal-body rod protein FlgB [Burkholderia thailandensis E264] Length = 124 Score = 38.3 bits (87), Expect = 0.92, Method: Composition-based stats. Identities = 15/94 (15%), Positives = 29/94 (30%), Gaps = 2/94 (2%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69 A +R +A N++N DT G++ + F + A Sbjct: 14 TALKLRAERTKIIASNLANLDTPGYQAQDLDFKRSLAEAAGGGAGARLGDAPAGGVTLGY 73 Query: 70 VGSFI--STGTELDFALEGDAWFALESPRGIILT 101 + G ++ +E A+ + LT Sbjct: 74 RVPYQAAQDGNTVELGIEQAAFAQNAIDFQMSLT 107 >gi|309779444|ref|ZP_07674205.1| flagellar basal-body rod protein FlgB [Ralstonia sp. 5_7_47FAA] gi|308921685|gb|EFP67321.1| flagellar basal-body rod protein FlgB [Ralstonia sp. 5_7_47FAA] Length = 151 Score = 38.3 bits (87), Expect = 0.92, Method: Composition-based stats. Identities = 11/78 (14%), Positives = 24/78 (30%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR +A N++N DT ++ F + +++ Sbjct: 15 ALHLRSQRHQILASNIANADTPNYKARDFDFQSALQKAVGQQGGNSLPMSATAAGHLSVD 74 Query: 71 GSFISTGTELDFALEGDA 88 G+ + + +L Sbjct: 75 GAPAGDVSLMQASLSQQT 92 >gi|167579496|ref|ZP_02372370.1| flagellar hook-associated protein FlgK [Burkholderia thailandensis TXDOH] Length = 667 Score = 38.3 bits (87), Expect = 0.92, Method: Composition-based stats. Identities = 8/72 (11%), Positives = 20/72 (27%) Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 G+V + S + + + + S N E ++ Q + + + Sbjct: 592 AGYVNAIGNAASQLKASSAAQTALVGQITQAQQSVSGVNQNEEAANLMQYQQLYQANAKV 651 Query: 227 IDENEKSMLEAI 238 I + Sbjct: 652 IQTANSVFQTVL 663 Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 27/80 (33%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 T N+G++ A L+T N+SN T G+ + ++E G + Sbjct: 3 NTLMNLGVSGLNAALWGLTTTGQNISNAATPGYSVERPVYAEASGQYTSSGYLPQGVSTV 62 Query: 62 GKEYLSKEVGSFISTGTELD 81 E + S + Sbjct: 63 TVERQYNQYLSNQLNAAQTQ 82 >gi|163744345|ref|ZP_02151705.1| Flagellar hook-associated protein [Oceanibulbus indolifex HEL-45] gi|161381163|gb|EDQ05572.1| Flagellar hook-associated protein [Oceanibulbus indolifex HEL-45] Length = 468 Score = 38.3 bits (87), Expect = 0.92, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 19/38 (50%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 ++FNI + E R S VA N++N T G+ + Sbjct: 5 SAFNIARSGLSTTEGRASLVAGNIANAQTEGYARREAV 42 >gi|134297201|ref|YP_001120936.1| flagellar basal body rod protein FlgB [Burkholderia vietnamiensis G4] gi|134140358|gb|ABO56101.1| flagellar basal-body rod protein FlgB [Burkholderia vietnamiensis G4] Length = 162 Score = 38.3 bits (87), Expect = 0.92, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 18/43 (41%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 A R ++ N++N DT G++ V F+ + D Sbjct: 15 ALDVRAYRQELLSSNIANADTPGYQARDVDFASALARSLKQTD 57 >gi|237753201|ref|ZP_04583681.1| flagellar basal-body rod protein [Helicobacter winghamensis ATCC BAA-430] gi|229375468|gb|EEO25559.1| flagellar basal-body rod protein [Helicobacter winghamensis ATCC BAA-430] Length = 144 Score = 38.3 bits (87), Expect = 0.93, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 19/42 (45%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 A R +A N++N T +R V F +++ +DI Sbjct: 16 ALDHRALRRDMIASNIANVSTPMYRPKDVNFEQMMALKADDI 57 >gi|156934443|ref|YP_001438359.1| flagellar basal body rod protein FlgB [Cronobacter sakazakii ATCC BAA-894] gi|260597442|ref|YP_003210013.1| flagellar basal body rod protein FlgB [Cronobacter turicensis z3032] gi|156532697|gb|ABU77523.1| hypothetical protein ESA_02274 [Cronobacter sakazakii ATCC BAA-894] gi|260216619|emb|CBA29911.1| Flagellar basal-body rod protein flgB [Cronobacter turicensis z3032] Length = 137 Score = 38.3 bits (87), Expect = 0.93, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 31/72 (43%), Gaps = 1/72 (1%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR +A N++N DT G++ + F+ + + + + + S+ + Sbjct: 15 AINLRAQRQEILAANIANADTPGYQARDIDFASQLKKVMDQ-GRASGSTMTLAMTSSRHI 73 Query: 71 GSFISTGTELDF 82 + STG LD Sbjct: 74 PAQASTGASLDL 85 >gi|84514836|ref|ZP_01002199.1| Flagellar proximal rod protein FlgB [Loktanella vestfoldensis SKA53] gi|84510995|gb|EAQ07449.1| Flagellar proximal rod protein FlgB [Loktanella vestfoldensis SKA53] Length = 105 Score = 38.3 bits (87), Expect = 0.93, Method: Composition-based stats. Identities = 7/33 (21%), Positives = 14/33 (42%) Query: 21 TVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 +A N++N T G++ + F + D Sbjct: 1 MLASNIANAGTPGYKARDIDFDRELARQAGDSP 33 >gi|84388088|ref|ZP_00990984.1| flagellar basal body protein [Vibrio splendidus 12B01] gi|84377155|gb|EAP94025.1| flagellar basal body protein [Vibrio splendidus 12B01] Length = 131 Score = 38.3 bits (87), Expect = 0.93, Method: Composition-based stats. Identities = 6/38 (15%), Positives = 18/38 (47%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 E+ ++ N++ +T G++ + F + + A + Sbjct: 20 ERNAEVLSTNIAQANTPGYKAKGLDFKKSLQAASSGAS 57 >gi|157959905|ref|YP_001499939.1| flagellar basal body rod protein FlgB [Shewanella pealeana ATCC 700345] gi|157844905|gb|ABV85404.1| flagellar basal-body rod protein FlgB [Shewanella pealeana ATCC 700345] Length = 116 Score = 38.3 bits (87), Expect = 0.94, Method: Composition-based stats. Identities = 7/53 (13%), Positives = 21/53 (39%) Query: 21 TVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSF 73 +A N++N +T G++ + F+ V+ + + + + + Sbjct: 25 MLAGNLANAETPGYKARDLDFNAVMTQLNSGMTPNQDYQVGYRIPHQTSADQN 77 >gi|83720978|ref|YP_440808.1| flagellar hook-associated protein FlgK [Burkholderia thailandensis E264] gi|167617593|ref|ZP_02386224.1| flagellar hook-associated protein FlgK [Burkholderia thailandensis Bt4] gi|257140541|ref|ZP_05588803.1| flagellar hook-associated protein FlgK [Burkholderia thailandensis E264] gi|83654803|gb|ABC38866.1| flagellar hook-associated protein 1 [Burkholderia thailandensis E264] Length = 667 Score = 38.3 bits (87), Expect = 0.95, Method: Composition-based stats. Identities = 8/72 (11%), Positives = 20/72 (27%) Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 G+V + S + + + + S N E ++ Q + + + Sbjct: 592 AGYVNAIGNAASQLKASSAAQTALVGQITQAQQSVSGVNQNEEAANLMQYQQLYQANAKV 651 Query: 227 IDENEKSMLEAI 238 I + Sbjct: 652 IQTANSVFQTVL 663 Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 27/80 (33%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 T N+G++ A L+T N+SN T G+ + ++E G + Sbjct: 3 NTLMNLGVSGLNAALWGLTTTGQNISNAATPGYSVERPVYAEASGQYTSSGYLPQGVSTV 62 Query: 62 GKEYLSKEVGSFISTGTELD 81 E + S + Sbjct: 63 TVERQYNQYLSNQLNAAQTQ 82 >gi|296126646|ref|YP_003633898.1| flagellar hook-associated protein FlgK [Brachyspira murdochii DSM 12563] gi|296018462|gb|ADG71699.1| flagellar hook-associated protein FlgK [Brachyspira murdochii DSM 12563] Length = 637 Score = 38.3 bits (87), Expect = 0.95, Method: Composition-based stats. Identities = 12/72 (16%), Positives = 24/72 (33%), Gaps = 5/72 (6%) Query: 176 GISPNIPPTPLEDLSGVTVKRGFLED-----SNANSMYEMGQMIHLTQKFNSITTLIDEN 230 + T + TV +LE S N E+ QM +N+ ++ Sbjct: 565 ARIASRTETANAETEKQTVVMEYLERLRQSVSGVNLDEEVAQMAMYQHGYNASARVVSIM 624 Query: 231 EKSMLEAIRNIA 242 ++ + I + Sbjct: 625 DQLLDVVINRMG 636 >gi|225863597|ref|YP_002748975.1| putative flagellar hook-associated protein [Bacillus cereus 03BB102] gi|225789227|gb|ACO29444.1| putative flagellar hook-associated protein [Bacillus cereus 03BB102] Length = 432 Score = 38.3 bits (87), Expect = 0.95, Method: Composition-based stats. Identities = 5/34 (14%), Positives = 11/34 (32%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 N EM ++ + F + + I + Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427 Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 23/53 (43%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 N L+ LA + L T N+SN T G+ V + + +QKI + Sbjct: 7 NTPLSGLLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSAGASQGYSPEQKIGY 59 >gi|157373210|ref|YP_001471810.1| flagellar basal body rod protein FlgB [Shewanella sediminis HAW-EB3] gi|157315584|gb|ABV34682.1| flagellar basal-body rod protein FlgB [Shewanella sediminis HAW-EB3] Length = 116 Score = 38.3 bits (87), Expect = 0.95, Method: Composition-based stats. Identities = 8/69 (11%), Positives = 22/69 (31%) Query: 21 TVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTEL 80 +A N++N +T G++ + F ++ I + + + + Sbjct: 25 ILAGNLANAETPGYKAKDLNFQALMSGINAGMPASNQYEVGYRVPYQTSADQNTVELGKE 84 Query: 81 DFALEGDAW 89 +A Sbjct: 85 QARYSQNAM 93 >gi|327398582|ref|YP_004339451.1| flagellar basal body rod protein [Hippea maritima DSM 10411] gi|327181211|gb|AEA33392.1| flagellar basal body rod protein [Hippea maritima DSM 10411] Length = 103 Score = 38.3 bits (87), Expect = 0.96, Method: Composition-based stats. Identities = 11/77 (14%), Positives = 23/77 (29%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 N L+ R A+N++N +T ++ + V E G + Sbjct: 3 INTSLSGIKNAFYRQDITANNVANINTKNYKQVNVINQEAKGGGVEAKTTVSKAAPNRNG 62 Query: 65 YLSKEVGSFISTGTELD 81 ++ + D Sbjct: 63 NNVSLADQMVNQISNQD 79 >gi|259417088|ref|ZP_05741007.1| flagellar basal body rod protein FlgB [Silicibacter sp. TrichCH4B] gi|259345994|gb|EEW57808.1| flagellar basal body rod protein FlgB [Silicibacter sp. TrichCH4B] Length = 138 Score = 38.3 bits (87), Expect = 0.97, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIKNDID 53 FNI + +R + V++N++N DT G+ +K F EV A + D Sbjct: 14 LNVFNIAYSMATHAGKRQALVSENIANADTPGYLAKDIKPFKEVFAAGEAQGD 66 >gi|327441058|dbj|BAK17423.1| flagellar basal body protein [Solibacillus silvestris StLB046] Length = 130 Score = 38.3 bits (87), Expect = 0.98, Method: Composition-based stats. Identities = 10/25 (40%), Positives = 18/25 (72%) Query: 21 TVADNMSNTDTVGFRTIKVKFSEVV 45 T+A N++N DT ++T +V F +V+ Sbjct: 24 TIAQNIANVDTPNYKTKEVSFKDVL 48 >gi|170703622|ref|ZP_02894363.1| flagellar hook-associated protein FlgK [Burkholderia ambifaria IOP40-10] gi|170131468|gb|EDT00055.1| flagellar hook-associated protein FlgK [Burkholderia ambifaria IOP40-10] Length = 665 Score = 38.3 bits (87), Expect = 0.98, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 25/69 (36%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 T N+G++ A L+T N+SN T G+ + ++E G + Sbjct: 3 NTLMNLGVSGLNAALWGLTTTGQNISNAATPGYSVERPVYAEASGQYTSSGYMPQGVNTV 62 Query: 62 GKEYLSKEV 70 + + Sbjct: 63 TVQRQYSQY 71 Score = 36.0 bits (81), Expect = 4.9, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 11/37 (29%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N E ++ Q + + +I + Sbjct: 625 SGVNQNEEAANLMQYQQLYQANAKVIQTAATLFQTVL 661 >gi|148554192|ref|YP_001261774.1| flagellar basal-body rod protein FlgB [Sphingomonas wittichii RW1] gi|148499382|gb|ABQ67636.1| flagellar basal-body rod protein FlgB [Sphingomonas wittichii RW1] Length = 115 Score = 38.3 bits (87), Expect = 0.98, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 20/44 (45%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54 A QRLS +A N++N T ++ + F + + + + Sbjct: 12 ALELRSQRLSMLASNIANAATPNYKARDIDFQKALSDATDGMSA 55 >gi|301053275|ref|YP_003791486.1| flagellar hook-associated protein [Bacillus anthracis CI] gi|300375444|gb|ADK04348.1| flagellar hook-associated protein [Bacillus cereus biovar anthracis str. CI] Length = 432 Score = 38.3 bits (87), Expect = 0.99, Method: Composition-based stats. Identities = 5/34 (14%), Positives = 11/34 (32%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 N EM ++ + F + + I + Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427 Score = 37.5 bits (85), Expect = 1.4, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 23/53 (43%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 N L+ LA + L T N+SN T G+ V + + +QKI + Sbjct: 7 NTPLSGLLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSAGASQGYSPEQKIGY 59 >gi|229121290|ref|ZP_04250521.1| Flagellar hook-associated protein FlgK [Bacillus cereus 95/8201] gi|228662135|gb|EEL17744.1| Flagellar hook-associated protein FlgK [Bacillus cereus 95/8201] Length = 432 Score = 38.3 bits (87), Expect = 0.99, Method: Composition-based stats. Identities = 5/34 (14%), Positives = 11/34 (32%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 N EM ++ + F + + I + Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427 Score = 37.5 bits (85), Expect = 1.4, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 23/53 (43%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 N L+ LA + L T N+SN T G+ V + + +QKI + Sbjct: 7 NTPLSGLLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSAGASQGYSPEQKIGY 59 >gi|30261738|ref|NP_844115.1| flagellar hook-associated protein FlgK [Bacillus anthracis str. Ames] gi|47526956|ref|YP_018305.1| flagellar hook-associated protein FlgK [Bacillus anthracis str. 'Ames Ancestor'] gi|49184566|ref|YP_027818.1| flagellar hook-associated protein FlgK [Bacillus anthracis str. Sterne] gi|65319005|ref|ZP_00391964.1| COG1256: Flagellar hook-associated protein [Bacillus anthracis str. A2012] gi|167633324|ref|ZP_02391649.1| putative flagellar hook-associated protein [Bacillus anthracis str. A0442] gi|167639070|ref|ZP_02397343.1| putative flagellar hook-associated protein [Bacillus anthracis str. A0193] gi|170686189|ref|ZP_02877411.1| putative flagellar hook-associated protein [Bacillus anthracis str. A0465] gi|170706527|ref|ZP_02896987.1| putative flagellar hook-associated protein [Bacillus anthracis str. A0389] gi|177650561|ref|ZP_02933528.1| putative flagellar hook-associated protein [Bacillus anthracis str. A0174] gi|190566328|ref|ZP_03019246.1| putative flagellar hook-associated protein [Bacillus anthracis Tsiankovskii-I] gi|229601207|ref|YP_002866138.1| putative flagellar hook-associated protein [Bacillus anthracis str. A0248] gi|254683226|ref|ZP_05147087.1| flagellar hook-associated protein FlgK [Bacillus anthracis str. CNEVA-9066] gi|254734579|ref|ZP_05192291.1| flagellar hook-associated protein FlgK [Bacillus anthracis str. Western North America USA6153] gi|254740987|ref|ZP_05198675.1| flagellar hook-associated protein FlgK [Bacillus anthracis str. Kruger B] gi|254759766|ref|ZP_05211790.1| flagellar hook-associated protein FlgK [Bacillus anthracis str. Australia 94] gi|30255966|gb|AAP25601.1| putative flagellar hook-associated protein [Bacillus anthracis str. Ames] gi|47502104|gb|AAT30780.1| putative flagellar hook-associated protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49178493|gb|AAT53869.1| flagellar hook-associated protein, putative [Bacillus anthracis str. Sterne] gi|167512860|gb|EDR88233.1| putative flagellar hook-associated protein [Bacillus anthracis str. A0193] gi|167531362|gb|EDR94040.1| putative flagellar hook-associated protein [Bacillus anthracis str. A0442] gi|170128625|gb|EDS97492.1| putative flagellar hook-associated protein [Bacillus anthracis str. A0389] gi|170669886|gb|EDT20627.1| putative flagellar hook-associated protein [Bacillus anthracis str. A0465] gi|172083705|gb|EDT68765.1| putative flagellar hook-associated protein [Bacillus anthracis str. A0174] gi|190562463|gb|EDV16430.1| putative flagellar hook-associated protein [Bacillus anthracis Tsiankovskii-I] gi|229265615|gb|ACQ47252.1| putative flagellar hook-associated protein [Bacillus anthracis str. A0248] Length = 432 Score = 38.3 bits (87), Expect = 0.99, Method: Composition-based stats. Identities = 5/34 (14%), Positives = 11/34 (32%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 N EM ++ + F + + I + Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427 Score = 37.5 bits (85), Expect = 1.4, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 23/53 (43%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 N L+ LA + L T N+SN T G+ V + + +QKI + Sbjct: 7 NTPLSGLLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSAGASQGYSPEQKIGY 59 >gi|163803166|ref|ZP_02197049.1| flagellar basal-body rod protein B [Vibrio sp. AND4] gi|159173066|gb|EDP57899.1| flagellar basal-body rod protein B [Vibrio sp. AND4] Length = 120 Score = 38.3 bits (87), Expect = 1.0, Method: Composition-based stats. Identities = 15/85 (17%), Positives = 30/85 (35%), Gaps = 1/85 (1%) Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76 QR +A N++N DT G+ + F+ V+ + + + S + Sbjct: 21 QRTKVLASNLANVDTPGYLAKDLSFTTVMDQVSASSVNEPVPKFRVEAQYSMPYQNSK-D 79 Query: 77 GTELDFALEGDAWFALESPRGIILT 101 G ++ +E + LT Sbjct: 80 GNTVELGVEQAKFTQNNMDFQTSLT 104 >gi|172061965|ref|YP_001809617.1| flagellar hook-associated protein FlgK [Burkholderia ambifaria MC40-6] gi|171994482|gb|ACB65401.1| flagellar hook-associated protein FlgK [Burkholderia ambifaria MC40-6] Length = 665 Score = 38.3 bits (87), Expect = 1.0, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 25/69 (36%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 T N+G++ A L+T N+SN T G+ + ++E G + Sbjct: 3 NTLMNLGVSGLNAALWGLTTTGQNISNAATPGYSVERPVYAEASGQYTSSGYMPQGVNTV 62 Query: 62 GKEYLSKEV 70 + + Sbjct: 63 TVQRQYSQY 71 Score = 36.0 bits (81), Expect = 5.0, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 11/37 (29%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N E ++ Q + + +I + Sbjct: 625 SGVNQNEEAANLMQYQQLYQANAKVIQTAATLFQTVL 661 >gi|293408365|ref|ZP_06652204.1| flagellar basal-body rod protein FlgC [Escherichia coli B354] gi|291471543|gb|EFF14026.1| flagellar basal-body rod protein FlgC [Escherichia coli B354] Length = 143 Score = 38.3 bits (87), Expect = 1.0, Method: Composition-based stats. Identities = 4/35 (11%), Positives = 15/35 (42%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 N + +M M+ ++ F + +++ + + Sbjct: 104 VNVVEQMADMMSASRDFETNVDVLNNVKSMQQSLL 138 Score = 36.4 bits (82), Expect = 3.7, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 6/45 (13%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVV 45 I +A A RL+TVA N++N + ++ F+ V Sbjct: 9 ISGSAMTAQTLRLNTVASNLANAEAPAGSEAQAYKARSPVFAAVY 53 >gi|297569163|ref|YP_003690507.1| flagellar basal-body rod protein FlgB [Desulfurivibrio alkaliphilus AHT2] gi|296925078|gb|ADH85888.1| flagellar basal-body rod protein FlgB [Desulfurivibrio alkaliphilus AHT2] Length = 128 Score = 38.3 bits (87), Expect = 1.0, Method: Composition-based stats. Identities = 8/44 (18%), Positives = 19/44 (43%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54 + +R + N++N +T G++ F V+ + + Q Sbjct: 17 SLNLRNERQGMIQSNIANLETPGYKVQDFPFERVMAQVVSGQGQ 60 >gi|325982375|ref|YP_004294777.1| flagellar basal-body rod protein FlgB [Nitrosomonas sp. AL212] gi|325531894|gb|ADZ26615.1| flagellar basal-body rod protein FlgB [Nitrosomonas sp. AL212] Length = 136 Score = 38.3 bits (87), Expect = 1.0, Method: Composition-based stats. Identities = 8/64 (12%), Positives = 20/64 (31%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69 A R ++ N++N DT F+ + F+ ++ + + + Sbjct: 14 TALSLRVARQELLSSNVANADTPNFKAKDIDFASMLHEKLSSTPSLKKVSLNTTSLMHIN 73 Query: 70 VGSF 73 Sbjct: 74 SSVP 77 >gi|167835119|ref|ZP_02462002.1| flagellar hook-associated protein FlgK [Burkholderia thailandensis MSMB43] Length = 667 Score = 38.3 bits (87), Expect = 1.0, Method: Composition-based stats. Identities = 8/72 (11%), Positives = 20/72 (27%) Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 G+V + S + + + + S N E ++ Q + + + Sbjct: 592 AGYVNAIGNAASQLKASSAAQTALVGQITQAQQSVSGVNQNEEAANLMQYQQLYQANAKV 651 Query: 227 IDENEKSMLEAI 238 I + Sbjct: 652 IQTANSVFQTVL 663 Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 27/80 (33%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 T N+G++ A L+T N+SN T G+ + ++E G + Sbjct: 3 NTLMNLGVSGLNAALWGLTTTGQNISNAATPGYSVERPVYAEASGQYTSSGYLPQGVSTV 62 Query: 62 GKEYLSKEVGSFISTGTELD 81 + + S + Sbjct: 63 TVQRQYNQYLSDQLNAAQTQ 82 >gi|170734377|ref|YP_001766324.1| flagellar basal body rod protein FlgB [Burkholderia cenocepacia MC0-3] gi|169817619|gb|ACA92202.1| flagellar basal-body rod protein FlgB [Burkholderia cenocepacia MC0-3] Length = 162 Score = 38.3 bits (87), Expect = 1.0, Method: Composition-based stats. Identities = 11/73 (15%), Positives = 26/73 (35%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A R ++ N++N DT G++ V F+ + ++ + + +++ Sbjct: 15 ALDVRAYRQELLSSNIANADTPGYQARDVDFASTLARSLKQTSGGLAPSNAAQLPMTQPA 74 Query: 71 GSFISTGTELDFA 83 G A Sbjct: 75 GVTSGMSMVSTAA 87 >gi|49477285|ref|YP_035858.1| flagellar hook-associated protein FlgK [Bacillus thuringiensis serovar konkukian str. 97-27] gi|118477174|ref|YP_894325.1| flagellar hook-associated protein FlgK [Bacillus thuringiensis str. Al Hakam] gi|196033487|ref|ZP_03100899.1| putative flagellar hook-associated protein [Bacillus cereus W] gi|196038896|ref|ZP_03106203.1| putative flagellar hook-associated protein [Bacillus cereus NVH0597-99] gi|229090699|ref|ZP_04221932.1| Flagellar hook-associated protein FlgK [Bacillus cereus Rock3-42] gi|300117343|ref|ZP_07055133.1| flagellar hook-associated protein FlgK [Bacillus cereus SJ1] gi|49328841|gb|AAT59487.1| flagellar hook-associated protein 1 [Bacillus thuringiensis serovar konkukian str. 97-27] gi|118416399|gb|ABK84818.1| flagellar hook-associated protein 1 [Bacillus thuringiensis str. Al Hakam] gi|195993921|gb|EDX57877.1| putative flagellar hook-associated protein [Bacillus cereus W] gi|196030041|gb|EDX68641.1| putative flagellar hook-associated protein [Bacillus cereus NVH0597-99] gi|228692641|gb|EEL46367.1| Flagellar hook-associated protein FlgK [Bacillus cereus Rock3-42] gi|298725178|gb|EFI65830.1| flagellar hook-associated protein FlgK [Bacillus cereus SJ1] Length = 432 Score = 38.3 bits (87), Expect = 1.0, Method: Composition-based stats. Identities = 5/34 (14%), Positives = 11/34 (32%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 N EM ++ + F + + I + Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427 Score = 37.5 bits (85), Expect = 1.4, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 23/53 (43%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 N L+ LA + L T N+SN T G+ V + + +QKI + Sbjct: 7 NTPLSGLLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSAGASQGYSPEQKIGY 59 >gi|52143720|ref|YP_083109.1| flagellar hook-associated protein FlgK [Bacillus cereus E33L] gi|51977189|gb|AAU18739.1| flagellar hook-associated protein 1 [Bacillus cereus E33L] Length = 432 Score = 38.3 bits (87), Expect = 1.0, Method: Composition-based stats. Identities = 5/34 (14%), Positives = 11/34 (32%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 N EM ++ + F + + I + Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427 Score = 37.5 bits (85), Expect = 1.4, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 23/53 (43%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 N L+ LA + L T N+SN T G+ V + + +QKI + Sbjct: 7 NTPLSGLLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSAGASQGYSPEQKIGY 59 >gi|328545508|ref|YP_004305617.1| flagellar basal-body rod protein B [polymorphum gilvum SL003B-26A1] gi|326415249|gb|ADZ72312.1| Flagellar basal-body rod protein B [Polymorphum gilvum SL003B-26A1] Length = 126 Score = 38.3 bits (87), Expect = 1.0, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%) Query: 15 LEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIK 49 L R +T+A+N++N+DT GF V F+ V + Sbjct: 17 LSVRQATIAENIANSDTPGFAARDVVPFASVFDQTR 52 >gi|212637782|ref|YP_002314307.1| flagellar basal body rod protein FlgB [Shewanella piezotolerans WP3] gi|212559266|gb|ACJ31720.1| Flagellar basal-body rod protein FlgB [Shewanella piezotolerans WP3] Length = 116 Score = 38.3 bits (87), Expect = 1.0, Method: Composition-based stats. Identities = 10/69 (14%), Positives = 24/69 (34%) Query: 21 TVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTEL 80 +A N++N +T G++ + F V+ + + + AS + + Sbjct: 25 MLAGNLANAETPGYKARDLDFKAVMSQLNAGMSPSRDYQASYRIPYQSSADQNTVELGKE 84 Query: 81 DFALEGDAW 89 +A Sbjct: 85 QARYSQNAM 93 >gi|196045090|ref|ZP_03112323.1| putative flagellar hook-associated protein [Bacillus cereus 03BB108] gi|228945341|ref|ZP_04107696.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|196024092|gb|EDX62766.1| putative flagellar hook-associated protein [Bacillus cereus 03BB108] gi|228814313|gb|EEM60579.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 432 Score = 38.3 bits (87), Expect = 1.0, Method: Composition-based stats. Identities = 5/34 (14%), Positives = 11/34 (32%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 N EM ++ + F + + I + Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427 Score = 37.5 bits (85), Expect = 1.4, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 23/53 (43%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 N L+ LA + L T N+SN T G+ V + + +QKI + Sbjct: 7 NTPLSGLLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSAGASQGYSPEQKIGY 59 >gi|218902853|ref|YP_002450687.1| putative flagellar hook-associated protein [Bacillus cereus AH820] gi|218537195|gb|ACK89593.1| putative flagellar hook-associated protein [Bacillus cereus AH820] Length = 432 Score = 38.3 bits (87), Expect = 1.0, Method: Composition-based stats. Identities = 5/34 (14%), Positives = 11/34 (32%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 N EM ++ + F + + I + Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427 Score = 37.5 bits (85), Expect = 1.4, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 23/53 (43%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 N L+ LA + L T N+SN T G+ V + + +QKI + Sbjct: 7 NTPLSGLLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSAGASQGYSPEQKIGY 59 >gi|255608368|ref|XP_002538891.1| Flagellar basal-body rod protein flgB, putative [Ricinus communis] gi|223509946|gb|EEF23492.1| Flagellar basal-body rod protein flgB, putative [Ricinus communis] Length = 156 Score = 38.3 bits (87), Expect = 1.0, Method: Composition-based stats. Identities = 11/67 (16%), Positives = 19/67 (28%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKE 69 AA QR +A N++N DT ++ + F + + E Sbjct: 25 AALRVRNQRQELLASNIANADTPQYKARDIDFQSAMQSALQQSAGVGPATQPASEMQQTN 84 Query: 70 VGSFIST 76 Sbjct: 85 NAHMNGN 91 >gi|167770235|ref|ZP_02442288.1| hypothetical protein ANACOL_01578 [Anaerotruncus colihominis DSM 17241] gi|167667557|gb|EDS11687.1| hypothetical protein ANACOL_01578 [Anaerotruncus colihominis DSM 17241] Length = 520 Score = 38.3 bits (87), Expect = 1.0, Method: Composition-based stats. Identities = 6/43 (13%), Positives = 16/43 (37%) Query: 200 EDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 E S E+ M+ + + + L+ ++++ I Sbjct: 474 EVSGVVMDEEVANMMLYQKSLQAASRLMTTLDEALDVLINKTG 516 >gi|153001475|ref|YP_001367156.1| flagellar basal body rod protein FlgB [Shewanella baltica OS185] gi|160876206|ref|YP_001555522.1| flagellar basal body rod protein FlgB [Shewanella baltica OS195] gi|217972595|ref|YP_002357346.1| flagellar basal body rod protein FlgB [Shewanella baltica OS223] gi|304409981|ref|ZP_07391600.1| flagellar basal-body rod protein FlgB [Shewanella baltica OS183] gi|307302306|ref|ZP_07582064.1| flagellar basal-body rod protein FlgB [Shewanella baltica BA175] gi|151366093|gb|ABS09093.1| flagellar basal-body rod protein FlgB [Shewanella baltica OS185] gi|160861728|gb|ABX50262.1| flagellar basal-body rod protein FlgB [Shewanella baltica OS195] gi|217497730|gb|ACK45923.1| flagellar basal-body rod protein FlgB [Shewanella baltica OS223] gi|304351390|gb|EFM15789.1| flagellar basal-body rod protein FlgB [Shewanella baltica OS183] gi|306914344|gb|EFN44765.1| flagellar basal-body rod protein FlgB [Shewanella baltica BA175] gi|315268396|gb|ADT95249.1| flagellar basal-body rod protein FlgB [Shewanella baltica OS678] Length = 134 Score = 38.3 bits (87), Expect = 1.0, Method: Composition-based stats. Identities = 9/32 (28%), Positives = 15/32 (46%), Gaps = 2/32 (6%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFS 42 A R ++ N++N DT ++ V FS Sbjct: 17 GIRAQ--RAEVISSNIANADTPHYKARDVDFS 46 >gi|206558976|ref|YP_002229736.1| flagellar hook-associated protein FlgK [Burkholderia cenocepacia J2315] gi|198035013|emb|CAR50885.1| flagellar hook-associated protein 1 (HAP1) [Burkholderia cenocepacia J2315] Length = 643 Score = 38.3 bits (87), Expect = 1.0, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 28/80 (35%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 T N+G++ A L+T N+SN T G+ + ++E G + Sbjct: 3 NTLMNLGVSGLNAALWGLTTTGQNISNAATPGYSVERPVYAEASGQYTSSGYMPQGVNTV 62 Query: 62 GKEYLSKEVGSFISTGTELD 81 + + S G + Sbjct: 63 TVQRQYSQYLSDQLNGAQTQ 82 Score = 36.0 bits (81), Expect = 4.1, Method: Composition-based stats. Identities = 7/72 (9%), Positives = 19/72 (26%) Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 +V + S + + + + S N E ++ Q + + + Sbjct: 568 ANYVNGIGNTASQLKSSSAAQTALVGQITQAQQSVSGVNQNEEAANLMQYQQLYQANAKV 627 Query: 227 IDENEKSMLEAI 238 I + Sbjct: 628 IQTASTLFQTVL 639 >gi|24374761|ref|NP_718804.1| flagellar basal body rod protein FlgB [Shewanella oneidensis MR-1] gi|24349427|gb|AAN56248.1|AE015762_5 flagellar basal-body rod protein FlgB [Shewanella oneidensis MR-1] Length = 134 Score = 38.3 bits (87), Expect = 1.0, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 23/52 (44%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLS 67 +R +A N++N DT ++ V FS + K Q+ S +G E Sbjct: 20 SERAEVLASNIANADTPHYKARDVDFSAALNVAKTQQQQRNSLEMTGDEQHF 71 >gi|254488055|ref|ZP_05101260.1| flagellar hook-associated protein FlgK [Roseobacter sp. GAI101] gi|214044924|gb|EEB85562.1| flagellar hook-associated protein FlgK [Roseobacter sp. GAI101] Length = 490 Score = 38.3 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 6/36 (16%), Positives = 18/36 (50%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 +S E+ +++ + Q F + ++ ++ M +R Sbjct: 454 VDSDQELQKLLLVEQAFAANARMVQAVDEMMQTLLR 489 Score = 36.8 bits (83), Expect = 3.0, Method: Composition-based stats. Identities = 7/31 (22%), Positives = 14/31 (45%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGF 34 + + + A + +A N+SN T G+ Sbjct: 12 ALSSAMQGLRAAGRGSEVIASNLSNALTPGY 42 >gi|212634345|ref|YP_002310870.1| flagellar basal body rod protein FlgB [Shewanella piezotolerans WP3] gi|212555829|gb|ACJ28283.1| Flagellar basal-body rod protein FlgB [Shewanella piezotolerans WP3] Length = 132 Score = 38.3 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 10/52 (19%), Positives = 24/52 (46%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLS 67 QR ++ N++N DT ++ V F++ + + ++ + GK + Sbjct: 20 SQRAEVLSSNIANADTPNYKARDVDFAKAMNSAQSRQSGLAMAKSDGKHFDM 71 >gi|320107049|ref|YP_004182639.1| flagellar hook-associated protein FlgK [Terriglobus saanensis SP1PR4] gi|319925570|gb|ADV82645.1| flagellar hook-associated protein FlgK [Terriglobus saanensis SP1PR4] Length = 467 Score = 38.3 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 12/88 (13%), Positives = 26/88 (29%), Gaps = 2/88 (2%) Query: 152 GKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMG 211 GK++ S S + +L+ T +R L S + E Sbjct: 374 GKIVGGETPASFFGSFLTQLGTTISGATTDETVTAAELTQATAQRNAL--SGVSLDEEAS 431 Query: 212 QMIHLTQKFNSITTLIDENEKSMLEAIR 239 + + + + + ++ AI Sbjct: 432 NLTEYQRSYQAAAKVFSIVDEMFASAIN 459 >gi|228926774|ref|ZP_04089842.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228832887|gb|EEM78456.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 432 Score = 38.3 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 5/34 (14%), Positives = 11/34 (32%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 N EM ++ + F + + I + Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 427 Score = 37.5 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 23/53 (43%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 N L+ LA + L T N+SN T G+ V + + +QKI + Sbjct: 7 NTPLSGLLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSAGASQGYSPEQKIGY 59 >gi|171322357|ref|ZP_02911181.1| flagellar hook-associated protein FlgK [Burkholderia ambifaria MEX-5] gi|171092319|gb|EDT37688.1| flagellar hook-associated protein FlgK [Burkholderia ambifaria MEX-5] Length = 665 Score = 38.3 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 25/69 (36%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 T N+G++ A L+T N+SN T G+ + ++E G + Sbjct: 3 NTLMNLGVSGLNAALWGLTTTGQNISNAATPGYSVERPVYAEASGQYTSSGYMPQGVNTV 62 Query: 62 GKEYLSKEV 70 + + Sbjct: 63 TVQRQYSQY 71 Score = 36.0 bits (81), Expect = 5.1, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 11/37 (29%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N E ++ Q + + +I + Sbjct: 625 SGVNQNEEAANLMQYQQLYQANAKVIQTAATLFQTVL 661 >gi|160880852|ref|YP_001559820.1| flagellar basal-body rod protein FlgB [Clostridium phytofermentans ISDg] gi|160429518|gb|ABX43081.1| flagellar basal-body rod protein FlgB [Clostridium phytofermentans ISDg] Length = 128 Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 6/28 (21%), Positives = 15/28 (53%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVV 45 R +++N++N DT ++ + F + Sbjct: 23 RQELLSNNLANNDTPNYKRKDLNFESYL 50 >gi|126175149|ref|YP_001051298.1| flagellar basal body rod protein FlgB [Shewanella baltica OS155] gi|125998354|gb|ABN62429.1| flagellar basal-body rod protein FlgB [Shewanella baltica OS155] Length = 134 Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 9/32 (28%), Positives = 15/32 (46%), Gaps = 2/32 (6%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFS 42 A R ++ N++N DT ++ V FS Sbjct: 17 GIRAQ--RAEVISSNIANADTPHYKARDVDFS 46 >gi|254227980|ref|ZP_04921410.1| flagellar basal-body rod protein FlgB [Vibrio sp. Ex25] gi|262396038|ref|YP_003287891.1| flagellar basal-body rod protein FlgB [Vibrio sp. Ex25] gi|151939476|gb|EDN58304.1| flagellar basal-body rod protein FlgB [Vibrio sp. Ex25] gi|262339632|gb|ACY53426.1| flagellar basal-body rod protein FlgB [Vibrio sp. Ex25] Length = 120 Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 30/85 (35%), Gaps = 1/85 (1%) Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76 QR +A N++N DT G+ + F+ V+ + K + S + Sbjct: 21 QRTKVLASNLANVDTPGYLAKDLSFTTVMNQVAAGGVNKPVPKFQVQAQYSVPYQNSK-D 79 Query: 77 GTELDFALEGDAWFALESPRGIILT 101 G ++ +E + LT Sbjct: 80 GNTVELGVEQAKFTQNNMDFQTSLT 104 >gi|323492341|ref|ZP_08097494.1| flagellar basal body rod protein FlgB [Vibrio brasiliensis LMG 20546] gi|323313388|gb|EGA66499.1| flagellar basal body rod protein FlgB [Vibrio brasiliensis LMG 20546] Length = 120 Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 30/85 (35%), Gaps = 1/85 (1%) Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76 QR +A N++N DT G+ + F+ V+ + K S + Sbjct: 21 QRTKVLASNLANVDTPGYLAKDLSFTTVMNQMAPQSVHKPVPQLQISSQYSIPYQNSK-D 79 Query: 77 GTELDFALEGDAWFALESPRGIILT 101 G ++ ++E + LT Sbjct: 80 GNTVELSVEQGKFTQNNMDFQTSLT 104 >gi|161526179|ref|YP_001581191.1| flagellar hook-associated protein FlgK [Burkholderia multivorans ATCC 17616] gi|189349105|ref|YP_001944733.1| flagellar hook-associated protein FlgK [Burkholderia multivorans ATCC 17616] gi|160343608|gb|ABX16694.1| flagellar hook-associated protein FlgK [Burkholderia multivorans ATCC 17616] gi|189333127|dbj|BAG42197.1| flagellar hook-associated protein 1 [Burkholderia multivorans ATCC 17616] Length = 659 Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 23/51 (45%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 T N+G++ A L+T N+SN T G+ + ++E G + Sbjct: 3 NTLMNLGVSGLNAALWGLTTTGQNISNAATPGYSVERPVYAEASGQYTSSG 53 Score = 36.0 bits (81), Expect = 4.9, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 11/37 (29%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N E ++ Q + + +I + Sbjct: 619 SGVNQNEEAANLMQYQQLYQANAKVIQTAATLFQTVL 655 >gi|228914317|ref|ZP_04077932.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228845311|gb|EEM90347.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 420 Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 5/34 (14%), Positives = 11/34 (32%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 N EM ++ + F + + I + Sbjct: 382 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 415 >gi|229183930|ref|ZP_04311146.1| Flagellar hook-associated protein FlgK [Bacillus cereus BGSC 6E1] gi|228599582|gb|EEK57186.1| Flagellar hook-associated protein FlgK [Bacillus cereus BGSC 6E1] Length = 420 Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 5/34 (14%), Positives = 11/34 (32%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 N EM ++ + F + + I + Sbjct: 382 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 415 >gi|284989558|ref|YP_003408112.1| hypothetical protein Gobs_0980 [Geodermatophilus obscurus DSM 43160] gi|284062803|gb|ADB73741.1| protein of unknown function DUF1078 domain protein [Geodermatophilus obscurus DSM 43160] Length = 134 Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 5/43 (11%), Positives = 20/43 (46%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 G++ + + +M Q+I + + + +++ + A++ Sbjct: 88 GYVRYPDIDLGDQMTQLIMAQRGYQANLAVVERATTAYQAALQ 130 Score = 35.2 bits (79), Expect = 7.0, Method: Composition-based stats. Identities = 8/27 (29%), Positives = 14/27 (51%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTD 30 S I + L + L V+DN++N + Sbjct: 6 SLGISGSGLLVHRKWLDAVSDNIANIN 32 >gi|260431753|ref|ZP_05785724.1| flagellar basal body rod protein FlgB [Silicibacter lacuscaerulensis ITI-1157] gi|260415581|gb|EEX08840.1| flagellar basal body rod protein FlgB [Silicibacter lacuscaerulensis ITI-1157] Length = 129 Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 11/39 (28%), Positives = 19/39 (48%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 F + A QR + ++ NM+N DT G+R ++ Sbjct: 5 LNVFKVAYAMATHAGQRQAVISRNMANADTPGYRARDIE 43 >gi|34557691|ref|NP_907506.1| hypothetical protein WS1332 [Wolinella succinogenes DSM 1740] gi|34483408|emb|CAE10406.1| hypothetical protein WS1332 [Wolinella succinogenes] Length = 94 Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 9/57 (15%), Positives = 19/57 (33%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 I ++ A ++ + N++N +T GF ++ E K Sbjct: 1 MQINASSIQAHSSWMNNSSHNVANVNTQGFGALQTNLEESPTQGITANSSKGEGATD 57 >gi|316936120|ref|YP_004111102.1| flagellar hook-associated protein FlgK [Rhodopseudomonas palustris DX-1] gi|315603834|gb|ADU46369.1| flagellar hook-associated protein FlgK [Rhodopseudomonas palustris DX-1] Length = 587 Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 8/28 (28%), Positives = 16/28 (57%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVGF 34 I L + + + ++S + N+SN T G+ Sbjct: 9 IALGSLMTTQVQISVTSSNISNASTTGY 36 >gi|89072308|ref|ZP_01158887.1| putative flagellar hook-associated protein [Photobacterium sp. SKA34] gi|89051840|gb|EAR57292.1| putative flagellar hook-associated protein [Photobacterium sp. SKA34] Length = 286 Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 7/40 (17%), Positives = 15/40 (37%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 S NS E ++ T + + +I + +R + Sbjct: 247 SAVNSDEEAANLMTFTNAYQANMKVISTANELFDSVLRLL 286 >gi|332311130|gb|EGJ24225.1| Flagellar hook-associated protein 1 [Listeria monocytogenes str. Scott A] Length = 494 Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 5/35 (14%), Positives = 12/35 (34%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 N EM ++ + + T ++ M + Sbjct: 457 VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALL 491 >gi|239909137|ref|YP_002955879.1| flagellar basal-body rod protein FlgB [Desulfovibrio magneticus RS-1] gi|239799004|dbj|BAH77993.1| flagellar basal-body rod protein FlgB [Desulfovibrio magneticus RS-1] Length = 136 Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 10/71 (14%), Positives = 26/71 (36%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 ++R + V N++N D F+ ++F + + A N + G + Sbjct: 16 MDLHQERQNVVMSNLANQDVPAFKARTLEFEQELQAALNIDGRGKMTRTQGGHMPTVFNA 75 Query: 72 SFISTGTELDF 82 + ++ + Sbjct: 76 AGFEGNIDMGW 86 >gi|325983735|ref|YP_004296136.1| flagellar basal-body rod protein FlgB [Nitrosomonas sp. AL212] gi|325533254|gb|ADZ27974.1| flagellar basal-body rod protein FlgB [Nitrosomonas sp. AL212] Length = 139 Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 11/37 (29%), Positives = 17/37 (45%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGA 47 A R +A N++N DT F+ + FS V+ Sbjct: 17 ALNLRAARQELLASNVANADTPNFKARDIDFSSVLRE 53 >gi|254255092|ref|ZP_04948409.1| Flagellar hook-associated protein [Burkholderia dolosa AUO158] gi|124899737|gb|EAY71580.1| Flagellar hook-associated protein [Burkholderia dolosa AUO158] Length = 446 Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 17/80 (21%), Positives = 28/80 (35%), Gaps = 1/80 (1%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 +IGL+ LA + L+ A N +N T G+ V + VG D + F Sbjct: 1 MNIMHIGLSGTLAAQAGLNVAARNTANLLTPGYTRQGVHLTSRVGG-GVDATSLVRFADQ 59 Query: 62 GKEYLSKEVGSFISTGTELD 81 K + + + Sbjct: 60 YKTQQKWASNAPYGRYSVTE 79 >gi|325524331|gb|EGD02432.1| flagellar hook-associated protein FlgK [Burkholderia sp. TJI49] Length = 48 Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 22/48 (45%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 N+G++ A L+T N+SN T G+ + ++E G + Sbjct: 1 MNLGVSGLNAALWGLTTTGQNISNAATPGYSVERPVYAEASGQYTSSG 48 >gi|228933022|ref|ZP_04095885.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228826623|gb|EEM72394.1| Flagellar hook-associated protein FlgK [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 420 Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 5/34 (14%), Positives = 11/34 (32%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 N EM ++ + F + + I + Sbjct: 382 VNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 415 >gi|167568430|ref|ZP_02361304.1| flagellar hook-associated protein FlgK [Burkholderia oklahomensis C6786] Length = 668 Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 12/37 (32%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N E ++ Q + + +I + + Sbjct: 628 SGVNQNEEAANLMQYQQLYQANAKVIQTADSLFKTVL 664 Score = 36.8 bits (83), Expect = 2.9, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 28/80 (35%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 T N+G++ A ++T N+SN+ T G+ + ++E G + Sbjct: 3 NTLMNLGISGLNAALWGITTTGQNISNSATPGYSVERPVYAEASGQYTSSGYLPQGVTTV 62 Query: 62 GKEYLSKEVGSFISTGTELD 81 E + S + Sbjct: 63 TVERQYNQYLSNQLNAAQTQ 82 >gi|167561212|ref|ZP_02354128.1| flagellar hook-associated protein FlgK [Burkholderia oklahomensis EO147] Length = 668 Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 12/37 (32%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N E ++ Q + + +I + + Sbjct: 628 SGVNQNEEAANLMQYQQLYQANAKVIQTADSLFKTVL 664 Score = 36.8 bits (83), Expect = 2.9, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 28/80 (35%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 T N+G++ A ++T N+SN+ T G+ + ++E G + Sbjct: 3 NTLMNLGISGLNAALWGITTTGQNISNSATPGYSVERPVYAEASGQYTSSGYLPQGVTTV 62 Query: 62 GKEYLSKEVGSFISTGTELD 81 E + S + Sbjct: 63 TVERQYNQYLSNQLNAAQTQ 82 >gi|47091667|ref|ZP_00229463.1| flagellar hook-associated protein 1-related protein [Listeria monocytogenes str. 4b H7858] gi|47019986|gb|EAL10723.1| flagellar hook-associated protein 1-related protein [Listeria monocytogenes str. 4b H7858] Length = 494 Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 5/35 (14%), Positives = 12/35 (34%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 N EM ++ + + T ++ M + Sbjct: 457 VNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALL 491 >gi|269961605|ref|ZP_06175967.1| flagellar hook-associated protein 1 [Vibrio harveyi 1DA3] gi|269833646|gb|EEZ87743.1| flagellar hook-associated protein 1 [Vibrio harveyi 1DA3] Length = 637 Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 20/35 (57%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39 N+G + L +++L+T N+SN +T G+ V Sbjct: 6 LNVGTQSVLTAQRQLNTTGHNISNANTEGYSRQSV 40 Score = 37.5 bits (85), Expect = 1.4, Method: Composition-based stats. Identities = 5/38 (13%), Positives = 14/38 (36%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S N E M+ Q + + + ++ + ++ Sbjct: 598 SGVNLDEEAANMMKFQQAYMASSRVMQAANDTFNTILQ 635 >gi|312882653|ref|ZP_07742390.1| flagellar hook-associated protein FlgK [Vibrio caribbenthicus ATCC BAA-2122] gi|309369614|gb|EFP97129.1| flagellar hook-associated protein FlgK [Vibrio caribbenthicus ATCC BAA-2122] Length = 624 Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 22/68 (32%), Gaps = 1/68 (1%) Query: 13 LALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGS 72 L +++L+T N+SN +T G+ V + V K S + + Sbjct: 14 LTAQKQLNTTGHNISNVNTDGYSRQSVI-QATETPRYHSGQTYGMGVHVEKVRRSWDQFA 72 Query: 73 FISTGTEL 80 Sbjct: 73 VSELNVST 80 Score = 35.2 bits (79), Expect = 8.1, Method: Composition-based stats. Identities = 5/32 (15%), Positives = 13/32 (40%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 S N E M+ Q + + + ++ + + Sbjct: 585 SGVNLDEEAANMMKFQQAYMASSRIMQASNDT 616 >gi|261253617|ref|ZP_05946190.1| flagellar basal-body rod protein FlgB [Vibrio orientalis CIP 102891] gi|260937008|gb|EEX92997.1| flagellar basal-body rod protein FlgB [Vibrio orientalis CIP 102891] Length = 131 Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 6/38 (15%), Positives = 19/38 (50%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 E+ ++ N++ +T G++ + F + + A ++ Sbjct: 20 ERNAEVMSTNIAQANTPGYKAKGMDFQKALQAATSEAS 57 >gi|254508414|ref|ZP_05120534.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus 16] gi|219548624|gb|EED25629.1| flagellar hook-associated protein FlgK [Vibrio parahaemolyticus 16] Length = 624 Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 23/68 (33%), Gaps = 1/68 (1%) Query: 13 LALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGS 72 L +++L+T N+SN +T G+ V + + V K S + + Sbjct: 14 LTAQRQLNTTGHNISNANTEGYSRQSVVQGTNIPRQYGG-ETYGMGVHVEKVRRSWDQFA 72 Query: 73 FISTGTEL 80 Sbjct: 73 VNELNMST 80 Score = 36.8 bits (83), Expect = 2.7, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 13/37 (35%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N E M+ Q + + + ++ + + Sbjct: 585 SGVNLDEEAANMMKFQQAYMASSRIMQAANDTFNTIL 621 >gi|86357860|ref|YP_469752.1| flagellar basal body rod protein [Rhizobium etli CFN 42] gi|86281962|gb|ABC91025.1| probable flagellar basal body rod protein [Rhizobium etli CFN 42] Length = 101 Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 10/51 (19%), Positives = 20/51 (39%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56 NI L+ A R+ +A+N++N+ T + + + V Sbjct: 8 NIALSGVRAQTTRVGAIANNVANSSTPDYARLNTSLTTVASGGVQATGNPT 58 >gi|163802597|ref|ZP_02196489.1| flagellar hook-associated protein K [Vibrio sp. AND4] gi|159173680|gb|EDP58499.1| flagellar hook-associated protein K [Vibrio sp. AND4] Length = 637 Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 20/35 (57%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39 N+G + L +++L+T N+SN +T G+ V Sbjct: 6 LNVGTQSVLTAQRQLNTTGHNISNANTEGYSRQSV 40 Score = 37.5 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 5/38 (13%), Positives = 14/38 (36%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S N E M+ Q + + + ++ + ++ Sbjct: 598 SGVNLDEEAANMMKFQQAYMASSRVMQAANDTFNTILQ 635 >gi|323498414|ref|ZP_08103410.1| flagellar hook-associated protein FlgK [Vibrio sinaloensis DSM 21326] gi|323316487|gb|EGA69502.1| flagellar hook-associated protein FlgK [Vibrio sinaloensis DSM 21326] Length = 624 Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 10/71 (14%), Positives = 23/71 (32%) Query: 13 LALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGS 72 L +++L+T N+SN +T G+ V + + + Sbjct: 14 LTAQRQLNTTGHNISNANTEGYSRQSVIQGTNMPRQFGGETYGMGVHVEKVRRSWDQFAV 73 Query: 73 FISTGTELDFA 83 + ++A Sbjct: 74 NELNMSTTNYA 84 Score = 36.4 bits (82), Expect = 3.7, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 13/37 (35%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N E M+ Q + + + ++ + + Sbjct: 585 SGVNLDEEAANMMKFQQAYMASSRIMQAANDTFNTIL 621 >gi|307823528|ref|ZP_07653757.1| flagellar basal-body rod protein FlgB [Methylobacter tundripaludum SV96] gi|307735513|gb|EFO06361.1| flagellar basal-body rod protein FlgB [Methylobacter tundripaludum SV96] Length = 130 Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 28/73 (38%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIS 75 E+R +A N++N DT F+ V F V+ A + VG+ + Sbjct: 20 EKRGEILAANLANADTPNFKARDVDFKSVLKQSMTSGVAMERTHAGHIAPQQQVVGANVM 79 Query: 76 TGTELDFALEGDA 88 +L+G+ Sbjct: 80 YRNPYQVSLDGNT 92 >gi|163856432|ref|YP_001630730.1| flagellar basal body rod protein FlgB [Bordetella petrii DSM 12804] gi|163260160|emb|CAP42462.1| flagellar basal-body rod protein FlgB [Bordetella petrii] Length = 135 Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats. Identities = 6/33 (18%), Positives = 14/33 (42%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50 R ++ N++N DT ++ F + + Sbjct: 22 RQEVLSSNIANADTPNYKARDFDFQAAMRNALD 54 >gi|170703093|ref|ZP_02893913.1| flagellar basal-body rod protein FlgB [Burkholderia ambifaria IOP40-10] gi|171321835|ref|ZP_02910736.1| flagellar basal-body rod protein FlgB [Burkholderia ambifaria MEX-5] gi|170131990|gb|EDT00498.1| flagellar basal-body rod protein FlgB [Burkholderia ambifaria IOP40-10] gi|171092873|gb|EDT38125.1| flagellar basal-body rod protein FlgB [Burkholderia ambifaria MEX-5] Length = 162 Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 17/42 (40%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 A R ++ N++N DT G++ V F+ + Sbjct: 15 ALDVRAYRQELLSSNIANADTPGYQARDVDFASTLARSLKQT 56 >gi|172061975|ref|YP_001809627.1| flagellar basal body rod protein FlgB [Burkholderia ambifaria MC40-6] gi|171994492|gb|ACB65411.1| flagellar basal-body rod protein FlgB [Burkholderia ambifaria MC40-6] Length = 162 Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 17/42 (40%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 A R ++ N++N DT G++ V F+ + Sbjct: 15 ALDVRAYRQELLSSNIANADTPGYQARDVDFASTLARSLKQT 56 >gi|78067840|ref|YP_370609.1| flagellar basal body rod protein FlgB [Burkholderia sp. 383] gi|77968585|gb|ABB09965.1| Flagellar basal-body rod protein FlgB [Burkholderia sp. 383] Length = 162 Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats. Identities = 11/73 (15%), Positives = 27/73 (36%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A R ++ N++N+DT G++ V F+ + ++ + + +++ Sbjct: 15 ALDVRAYRQELLSSNIANSDTPGYQARDVDFASTLARSLKQTGGGLAPSNAAQLPMAQPA 74 Query: 71 GSFISTGTELDFA 83 G A Sbjct: 75 GVTSGMSMVSTAA 87 >gi|115353121|ref|YP_774960.1| flagellar basal body rod protein FlgB [Burkholderia ambifaria AMMD] gi|115283109|gb|ABI88626.1| flagellar basal-body rod protein FlgB [Burkholderia ambifaria AMMD] Length = 162 Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 17/42 (40%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 A R ++ N++N DT G++ V F+ + Sbjct: 15 ALDVRAYRQELLSSNIANADTPGYQARDVDFASTLARSLKQA 56 >gi|262273522|ref|ZP_06051336.1| flagellar hook-associated protein FlgK [Grimontia hollisae CIP 101886] gi|262222500|gb|EEY73811.1| flagellar hook-associated protein FlgK [Grimontia hollisae CIP 101886] Length = 464 Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats. Identities = 6/34 (17%), Positives = 14/34 (41%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSML 235 S N E ++ TQ + + +I ++ + Sbjct: 424 SGVNLDEEAVSLMQFTQMYQANAKVISTAQQLLD 457 Score = 37.5 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 6/82 (7%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 FNIGL+ A LS N++ + G+ ++ F D ++S V Sbjct: 1 MNLFNIGLSGLNAASAGLSVTGQNINQSLVPGYSRQRISFGS------QDGGVQVSSVER 54 Query: 62 GKEYLSKEVGSFISTGTELDFA 83 + + +G A Sbjct: 55 MSDTFTHLQIQRQRSGFGYHQA 76 >gi|254246962|ref|ZP_04940283.1| Flagellar basal-body rod protein FlgB [Burkholderia cenocepacia PC184] gi|124871738|gb|EAY63454.1| Flagellar basal-body rod protein FlgB [Burkholderia cenocepacia PC184] Length = 172 Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 17/43 (39%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 A R ++ N++N DT G++ V F+ + Sbjct: 25 ALDVRAYRQELLSSNIANADTPGYQARDVDFASTLARSLKQTS 67 >gi|56130699|ref|YP_145602.1| putative flagellar basal-body rod protein [Ralstonia metallidurans CH34] gi|94152373|ref|YP_581780.1| flagellar basal-body rod protein FlgB [Cupriavidus metallidurans CH34] gi|187928838|ref|YP_001899325.1| flagellar basal-body rod protein FlgB [Ralstonia pickettii 12J] gi|56068689|emb|CAI11251.1| putative flagellar basal-body rod protein [Cupriavidus metallidurans CH34] gi|93358743|gb|ABF12830.1| flagellar basal-body rod protein FlgB [Cupriavidus metallidurans CH34] gi|187725728|gb|ACD26893.1| flagellar basal-body rod protein FlgB [Ralstonia pickettii 12J] Length = 140 Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats. Identities = 8/66 (12%), Positives = 22/66 (33%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A +R ++ N++N DT ++ + FS + + + ++ Sbjct: 20 ALRLRTRRFELLSANIANADTPNYKARDIDFSAELDRVMGSGQNFAGMTMTSPRHIEASK 79 Query: 71 GSFIST 76 + Sbjct: 80 PALEED 85 >gi|156973594|ref|YP_001444501.1| flagellar hook-associated protein FlgK [Vibrio harveyi ATCC BAA-1116] gi|156525188|gb|ABU70274.1| hypothetical protein VIBHAR_01297 [Vibrio harveyi ATCC BAA-1116] Length = 637 Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 20/35 (57%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39 N+G + L +++L+T N+SN +T G+ V Sbjct: 6 LNVGTQSVLTAQRQLNTTGHNISNANTEGYSRQSV 40 Score = 37.5 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 5/38 (13%), Positives = 14/38 (36%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S N E M+ Q + + + ++ + ++ Sbjct: 598 SGVNLDEEAANMMKFQQAYMASSRVMQAANDTFNTILQ 635 >gi|153834473|ref|ZP_01987140.1| flagellar hook-associated protein FlgK [Vibrio harveyi HY01] gi|148869169|gb|EDL68201.1| flagellar hook-associated protein FlgK [Vibrio harveyi HY01] Length = 637 Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 20/35 (57%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39 N+G + L +++L+T N+SN +T G+ V Sbjct: 6 LNVGTQSVLTAQRQLNTTGHNISNANTEGYSRQSV 40 Score = 37.5 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 5/38 (13%), Positives = 14/38 (36%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S N E M+ Q + + + ++ + ++ Sbjct: 598 SGVNLDEEAANMMKFQQAYMASSRVMQAANDTFNTILQ 635 >gi|325529010|gb|EGD06023.1| flagellar basal body rod protein FlgB [Burkholderia sp. TJI49] Length = 162 Score = 37.9 bits (86), Expect = 1.4, Method: Composition-based stats. Identities = 11/73 (15%), Positives = 27/73 (36%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A R ++ N++N DT G++ V F+ + + ++ + + +++ Sbjct: 15 ALDVRAYRQELLSSNIANADTPGYQARDVDFASALARSLKQANGGLAPSNAAQLPMTQPA 74 Query: 71 GSFISTGTELDFA 83 G A Sbjct: 75 GVTSGMTMASTAA 87 >gi|313610115|gb|EFR85438.1| conserved hypothetical protein [Listeria monocytogenes FSL F2-208] Length = 37 Score = 37.9 bits (86), Expect = 1.4, Method: Composition-based stats. Identities = 6/36 (16%), Positives = 12/36 (33%) Query: 206 SMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 E ++ F T +I + M + + I Sbjct: 1 MSREFVNLMTYQSGFQGNTKVIRVADDVMKQIVNLI 36 >gi|91224202|ref|ZP_01259465.1| flagellar basal body rod protein [Vibrio alginolyticus 12G01] gi|269965641|ref|ZP_06179754.1| Flagellar basal-body rod protein flgB [Vibrio alginolyticus 40B] gi|91191113|gb|EAS77379.1| flagellar basal body rod protein [Vibrio alginolyticus 12G01] gi|269829709|gb|EEZ83945.1| Flagellar basal-body rod protein flgB [Vibrio alginolyticus 40B] Length = 120 Score = 37.9 bits (86), Expect = 1.4, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 30/85 (35%), Gaps = 1/85 (1%) Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76 QR +A N++N DT G+ + F+ V+ + K + S + Sbjct: 21 QRTKVLASNLANVDTPGYLAKDLSFTTVMNQVTAGGVNKPVPKFQVQAQYSVPYQNSK-N 79 Query: 77 GTELDFALEGDAWFALESPRGIILT 101 G ++ +E + LT Sbjct: 80 GNTVELGVEQAKFTQNNMDFQTSLT 104 >gi|206558965|ref|YP_002229725.1| flagellar basal body rod protein FlgB [Burkholderia cenocepacia J2315] gi|198035002|emb|CAR50874.1| flagellar basal-body rod protein FlgB (putative proximal rod protein) [Burkholderia cenocepacia J2315] Length = 162 Score = 37.9 bits (86), Expect = 1.4, Method: Composition-based stats. Identities = 10/70 (14%), Positives = 25/70 (35%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A R ++ N++N DT G++ V F+ + ++ + + +++ Sbjct: 15 ALDVRAYRQELLSSNIANADTPGYQARDVDFASTLARSLKQTSGGLAPSNAAQLPMTQPA 74 Query: 71 GSFISTGTEL 80 G Sbjct: 75 GVTSGMSMVS 84 >gi|86146158|ref|ZP_01064484.1| flagellar basal body protein [Vibrio sp. MED222] gi|218708801|ref|YP_002416422.1| flagellar basal body rod protein FlgB [Vibrio splendidus LGP32] gi|85836105|gb|EAQ54237.1| flagellar basal body protein [Vibrio sp. MED222] gi|218321820|emb|CAV17788.1| Flagellar basal body protein FlgB [Vibrio splendidus LGP32] Length = 131 Score = 37.9 bits (86), Expect = 1.4, Method: Composition-based stats. Identities = 6/38 (15%), Positives = 19/38 (50%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 E+ ++ N++ +T G++ + F++ + A + Sbjct: 20 ERNAEVLSTNIAQANTPGYKAKGLDFNKSLQAASSGAS 57 >gi|107023956|ref|YP_622283.1| flagellar basal body rod protein FlgB [Burkholderia cenocepacia AU 1054] gi|116691043|ref|YP_836666.1| flagellar basal body rod protein FlgB [Burkholderia cenocepacia HI2424] gi|105894145|gb|ABF77310.1| flagellar basal-body rod protein FlgB [Burkholderia cenocepacia AU 1054] gi|116649132|gb|ABK09773.1| flagellar basal-body rod protein FlgB [Burkholderia cenocepacia HI2424] Length = 162 Score = 37.9 bits (86), Expect = 1.4, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 17/43 (39%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 A R ++ N++N DT G++ V F+ + Sbjct: 15 ALDVRAYRQELLSSNIANADTPGYQARDVDFASTLARSLKQTS 57 >gi|153831645|ref|ZP_01984312.1| flagellar basal-body rod protein FlgB [Vibrio harveyi HY01] gi|156976138|ref|YP_001447044.1| flagellar basal body rod protein FlgB [Vibrio harveyi ATCC BAA-1116] gi|269960113|ref|ZP_06174489.1| Flagellar basal-body rod protein flgB [Vibrio harveyi 1DA3] gi|148872155|gb|EDL70972.1| flagellar basal-body rod protein FlgB [Vibrio harveyi HY01] gi|156527732|gb|ABU72817.1| hypothetical protein VIBHAR_04909 [Vibrio harveyi ATCC BAA-1116] gi|269835084|gb|EEZ89167.1| Flagellar basal-body rod protein flgB [Vibrio harveyi 1DA3] Length = 120 Score = 37.5 bits (85), Expect = 1.4, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 30/85 (35%), Gaps = 1/85 (1%) Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76 QR +A N++N DT G+ + F+ V+ + K + S + Sbjct: 21 QRTKVLASNLANVDTPGYLAKDLSFTTVMNQMSAGSVNKPVPKFQVEAQYSVPYQNSK-D 79 Query: 77 GTELDFALEGDAWFALESPRGIILT 101 G ++ +E + LT Sbjct: 80 GNTVELGVEQAKFTQNNMDFQTSLT 104 >gi|95929846|ref|ZP_01312587.1| flagellar basal-body rod protein FlgB [Desulfuromonas acetoxidans DSM 684] gi|95134142|gb|EAT15800.1| flagellar basal-body rod protein FlgB [Desulfuromonas acetoxidans DSM 684] Length = 136 Score = 37.5 bits (85), Expect = 1.4, Method: Composition-based stats. Identities = 6/57 (10%), Positives = 17/57 (29%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLS 67 + + +A N++N T G++ F + + ++ Sbjct: 17 SMDLRLRNQQIIAANVANAQTPGYQAKTFTFEDALRQAATGKGTDMAVTHPQHISTH 73 >gi|332092901|gb|EGI97969.1| flagellar basal-body rod protein flgC [Shigella dysenteriae 155-74] Length = 49 Score = 37.5 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 6/46 (13%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNT-DTVG-----FRTIKVKF 41 F+I +A A QRL+ A N++N G +R +V F Sbjct: 4 LNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRAKQVVF 49 >gi|332702981|ref|ZP_08423069.1| flagellar basal-body rod protein FlgB [Desulfovibrio africanus str. Walvis Bay] gi|332553130|gb|EGJ50174.1| flagellar basal-body rod protein FlgB [Desulfovibrio africanus str. Walvis Bay] Length = 167 Score = 37.5 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 28/68 (41%), Gaps = 3/68 (4%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 Q L +A N+SN +T ++ ++ F E + DID + + + ++ Sbjct: 49 LRLQRQNL-VIA-NISNINTPNYKPRRLDFEEKL-QKALDIDSRGKMARTDENHVPTAFN 105 Query: 72 SFISTGTE 79 + +G Sbjct: 106 AKGFSGDW 113 >gi|326386927|ref|ZP_08208541.1| flagellar proximal rod protein [Novosphingobium nitrogenifigens DSM 19370] gi|326208607|gb|EGD59410.1| flagellar proximal rod protein [Novosphingobium nitrogenifigens DSM 19370] Length = 118 Score = 37.5 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 11/66 (16%), Positives = 25/66 (37%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QRL + N++N T G++ + F+ + ++ + +S + Sbjct: 15 ALELRAQRLGLLTSNIANAATPGYKARDIDFASALKSMTQGASNSQAISSSTLYRVPVMP 74 Query: 71 GSFIST 76 +T Sbjct: 75 SLDGNT 80 >gi|85712260|ref|ZP_01043311.1| Flagellar hook-associated protein [Idiomarina baltica OS145] gi|85693887|gb|EAQ31834.1| Flagellar hook-associated protein [Idiomarina baltica OS145] Length = 685 Score = 37.5 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 26/213 (12%), Positives = 53/213 (24%), Gaps = 12/213 (5%) Query: 40 KFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 F + G D V + + +V G D L G + + + Sbjct: 475 NFFDAAGKTLADGAPTGVAVDAVNSDGTFDVTLSRKNG--SDITLTGLSDLKNLAQQAND 532 Query: 100 LTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMG 159 GS + A I + F+ GE + + A + Sbjct: 533 QAAANGNPAPFAGSPLDYDISINGQPAAGDSYSIEYNTDGFDDNRNGEAFTELQQNAQLR 592 Query: 160 LYSVDMSQGFV----------RRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYE 209 S D + S + + + S N E Sbjct: 593 RSSADSDDANMTFAEGYSRVVSDIGSYVQQTRTRRDAAQAIEAQTQAMYEAKSGVNLEEE 652 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 +I + +N+ +I +++ + + Sbjct: 653 AANLIQFERAYNAAARIITVAQRTFDSLLNAVG 685 >gi|146293693|ref|YP_001184117.1| flagellar basal body rod protein FlgB [Shewanella putrefaciens CN-32] gi|145565383|gb|ABP76318.1| flagellar basal-body rod protein FlgB [Shewanella putrefaciens CN-32] gi|319427092|gb|ADV55166.1| flagellar basal-body rod protein FlgB [Shewanella putrefaciens 200] Length = 134 Score = 37.5 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 8/25 (32%), Positives = 14/25 (56%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFS 42 R ++ N++N DT ++ V FS Sbjct: 22 RAEVISSNIANADTPHYKARDVDFS 46 >gi|157738172|ref|YP_001490856.1| flagellar basal body rod protein FlgB [Arcobacter butzleri RM4018] gi|315636315|ref|ZP_07891565.1| flagellar basal body rod protein FlgB [Arcobacter butzleri JV22] gi|157700026|gb|ABV68186.1| flagellar basal body rod protein FlgB [Arcobacter butzleri RM4018] gi|315479404|gb|EFU70087.1| flagellar basal body rod protein FlgB [Arcobacter butzleri JV22] Length = 132 Score = 37.5 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 7/33 (21%), Positives = 17/33 (51%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50 + ++ N++N +T ++T + F E + N Sbjct: 20 KQKVISSNIANVNTPNYKTKDLVFQEELDKNSN 52 >gi|254464199|ref|ZP_05077610.1| flagellar basal-body rod protein; FlgB [Rhodobacterales bacterium Y4I] gi|206685107|gb|EDZ45589.1| flagellar basal-body rod protein; FlgB [Rhodobacterales bacterium Y4I] Length = 129 Score = 37.5 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 1/53 (1%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIKNDID 53 F I + +R + VA N++N DT G+ +K F+EV A Sbjct: 5 LNVFKIAYSMATHAGKRQALVAQNIANADTPGYHAKDIKPFTEVFAAGARQSS 57 >gi|260767763|ref|ZP_05876698.1| flagellar hook-associated protein FlgK [Vibrio furnissii CIP 102972] gi|260617272|gb|EEX42456.1| flagellar hook-associated protein FlgK [Vibrio furnissii CIP 102972] Length = 599 Score = 37.5 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 6/37 (16%), Positives = 13/37 (35%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N E M+ Q + + + +I + + Sbjct: 560 SGVNLDEEAANMMKFQQAYMASSRIIQAANDTFNTIL 596 >gi|227815506|ref|YP_002815515.1| putative flagellar hook-associated protein [Bacillus anthracis str. CDC 684] gi|254755229|ref|ZP_05207263.1| flagellar hook-associated protein FlgK [Bacillus anthracis str. Vollum] gi|227007620|gb|ACP17363.1| putative flagellar hook-associated protein [Bacillus anthracis str. CDC 684] Length = 214 Score = 37.5 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 23/53 (43%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 N L+ LA + L T N+SN T G+ V + + +QKI + Sbjct: 7 NTPLSGLLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSAGASQGYSPEQKIGY 59 >gi|153839997|ref|ZP_01992664.1| flagellar hook-associated protein [Vibrio parahaemolyticus AQ3810] gi|149746457|gb|EDM57466.1| flagellar hook-associated protein [Vibrio parahaemolyticus AQ3810] Length = 375 Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats. Identities = 4/36 (11%), Positives = 13/36 (36%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 N E M+ Q + + + ++ + ++ Sbjct: 338 VNLDEEAANMMKFQQAYMASSRVMQAANDTFNTILQ 373 >gi|127512276|ref|YP_001093473.1| flagellar basal body rod protein FlgB [Shewanella loihica PV-4] gi|126637571|gb|ABO23214.1| flagellar basal-body rod protein FlgB [Shewanella loihica PV-4] Length = 132 Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats. Identities = 8/59 (13%), Positives = 22/59 (37%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFI 74 R ++ N++N DT ++ + F + + A + ++ K + + Sbjct: 20 SARAEVISSNIANADTPHYKAKDLDFDKALQAARTAQSGLAMSRSNEKHFDLAALSQQH 78 >gi|229172385|ref|ZP_04299944.1| Flagellar hook-associated protein FlgK [Bacillus cereus MM3] gi|228610856|gb|EEK68119.1| Flagellar hook-associated protein FlgK [Bacillus cereus MM3] Length = 432 Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 23/53 (43%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 N L+ LA + L T N+SN T G+ V + + +QKI + Sbjct: 7 NTPLSGLLAAQMGLQTTKQNLSNIHTPGYVRQMVNYGSAGASQGYSPEQKIGY 59 Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats. Identities = 4/34 (11%), Positives = 11/34 (32%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 N EM ++ + F + + + + Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAMTTMNEVFDSL 427 >gi|114765248|ref|ZP_01444380.1| flagellar hook-associated protein K [Pelagibaca bermudensis HTCC2601] gi|114542383|gb|EAU45411.1| flagellar hook-associated protein K [Roseovarius sp. HTCC2601] Length = 470 Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats. Identities = 18/138 (13%), Positives = 38/138 (27%), Gaps = 8/138 (5%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 T+ N + + TV+ N++N + + + + V Q + Sbjct: 4 ITALNAARSGMSTSSRWAETVSTNIANANNASYARRETQ----VTTNVQGAAQVSEITRA 59 Query: 62 GKEYLSKEVGSFISTGTELDFALEG----DAWFALESPRGIILTRDGRFKVTDDGSLVSA 117 L + + D G + +LTR F+ + VS Sbjct: 60 VDGALDAMYRGEVGRTAKQDAIAAGLESYTSLLGDTESTDTVLTRLTDFQSSLGLLAVSP 119 Query: 118 SGKYPVLDMASVPIQIPQ 135 + ++ Q Sbjct: 120 ADTALQRATVGDAQELTQ 137 >gi|238028842|ref|YP_002913073.1| flagellar hook-associated protein FlgK [Burkholderia glumae BGR1] gi|237878036|gb|ACR30369.1| Flagellar hook-associated protein [Burkholderia glumae BGR1] Length = 664 Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 11/37 (29%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N E ++ Q + + +I + Sbjct: 624 SGVNQDEEAVNLMQYQQMYQANAKVIQTASTLFSTLL 660 >gi|195940723|ref|ZP_03086105.1| flagellar hook protein FlgE [Escherichia coli O157:H7 str. EC4024] Length = 30 Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats. Identities = 4/27 (14%), Positives = 10/27 (37%) Query: 213 MIHLTQKFNSITTLIDENEKSMLEAIR 239 MI + + S I ++ + + Sbjct: 1 MIVAQRNYQSNAQTIKTQDQILNTLVN 27 >gi|291520178|emb|CBK75399.1| Flagellar hook-associated protein [Butyrivibrio fibrisolvens 16/4] Length = 396 Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats. Identities = 6/39 (15%), Positives = 17/39 (43%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 +S E+ MI +N+ + I+ + + + ++ Sbjct: 356 VSSDEELTTMIKYQSAYNAASRYINVVNEMIEHLVTSLG 394 >gi|15616943|ref|NP_240156.1| flagellar basal-body rod protein FlgB [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|25403596|pir||B84969 flagellar basal-body rod protein flgB [imported] - Buchnera sp. (strain APS) gi|10039008|dbj|BAB13042.1| flagellar basal-body rod protein flgB [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] Length = 115 Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats. Identities = 8/25 (32%), Positives = 15/25 (60%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFS 42 R ++ N++N DT G+++I F Sbjct: 4 RQEILSANIANADTPGYKSIDFNFK 28 >gi|149908762|ref|ZP_01897423.1| LfgB [Moritella sp. PE36] gi|149808304|gb|EDM68243.1| LfgB [Moritella sp. PE36] Length = 123 Score = 37.5 bits (85), Expect = 1.7, Method: Composition-based stats. Identities = 17/109 (15%), Positives = 33/109 (30%), Gaps = 1/109 (0%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A A QR +A N++N DT G+ F V+ ++ ++Q + + Sbjct: 15 ALQARVQRSEILAGNLANVDTPGYLARDYDFKSVLTNLEMQLNQSTGG-RLPELEMDSLY 73 Query: 71 GSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASG 119 + + A G + + + G G Sbjct: 74 RVPFQASKDGNTAELGVEQAKFNNNAMNFQSSLTFLNMRIQGLQKVIDG 122 >gi|56460246|ref|YP_155527.1| flagellar hook-associated protein [Idiomarina loihiensis L2TR] gi|56179256|gb|AAV81978.1| Flagellar hook-associated protein [Idiomarina loihiensis L2TR] Length = 671 Score = 37.5 bits (85), Expect = 1.7, Method: Composition-based stats. Identities = 5/39 (12%), Positives = 14/39 (35%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 N E +I Q + + +I ++ + ++ Sbjct: 633 VNLEEEAANLIQYQQAYTASARIITTSQAIFETLLTSLR 671 Score = 36.4 bits (82), Expect = 3.9, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIKN 50 NIG LA +Q L T N++NT+T + + + F G ++ Sbjct: 6 LNIGKNGILAHQQSLQTTGKNINNTNTDSYVRERTEYFESSYGGLER 52 >gi|186686674|ref|YP_001869868.1| hypothetical protein Npun_CR013 [Nostoc punctiforme PCC 73102] gi|186469559|gb|ACC85357.1| conserved hypothetical protein [Nostoc punctiforme PCC 73102] Length = 457 Score = 37.5 bits (85), Expect = 1.7, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 2/41 (4%) Query: 201 DSNANSMYEM-GQMIHLTQKFNSITTLIDENEKSMLEAIRN 240 SN ++ +I L Q F++ I++ +K + EAI N Sbjct: 163 QSNVEVTKQLSTDLISLKQAFDAQQKTIEQLQKGL-EAINN 202 >gi|163733138|ref|ZP_02140582.1| flagellar basal-body rod protein FlgB, putative [Roseobacter litoralis Och 149] gi|161393673|gb|EDQ17998.1| flagellar basal-body rod protein FlgB, putative [Roseobacter litoralis Och 149] Length = 141 Score = 37.5 bits (85), Expect = 1.7, Method: Composition-based stats. Identities = 9/51 (17%), Positives = 19/51 (37%), Gaps = 1/51 (1%) Query: 17 QRLSTVADNMSNTDTVGFR-TIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66 Q+ + A N++N+DT F+ + FS+ ++ Sbjct: 29 QKQAVTAQNVANSDTPDFKAKDLIAFSDAYRLDPSNGGWGSQKATRQTHIH 79 >gi|163744318|ref|ZP_02151678.1| Flagellar basal body protein [Oceanibulbus indolifex HEL-45] gi|161381136|gb|EDQ05545.1| Flagellar basal body protein [Oceanibulbus indolifex HEL-45] Length = 119 Score = 37.5 bits (85), Expect = 1.7, Method: Composition-based stats. Identities = 12/76 (15%), Positives = 29/76 (38%), Gaps = 4/76 (5%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKV-KFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 L R V++N++N T F+ V F+ ++ ++ + V + ++ + Sbjct: 1 MQWLSARQKVVSENVANVATPNFKARDVSSFASMLS---GELSRDNGLVTTHDKHFTGVA 57 Query: 71 GSFISTGTELDFALEG 86 D ++ G Sbjct: 58 QGTPGVREVTDRSVIG 73 >gi|82544461|ref|YP_408408.1| cell-proximal portion of basal-body rod [Shigella boydii Sb227] gi|81245872|gb|ABB66580.1| cell-proximal portion of basal-body rod [Shigella boydii Sb227] gi|320186980|gb|EFW61693.1| Flagellar basal-body rod protein FlgB [Shigella flexneri CDC 796-83] gi|332094098|gb|EGI99150.1| flagellar basal-body rod protein FlgB [Shigella boydii 3594-74] Length = 109 Score = 37.5 bits (85), Expect = 1.8, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 23/62 (37%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A QR +A N++N DT+G++ + F+ + + S VA Sbjct: 15 ALNLRAQRQEVLAANIANADTLGYQARDIDFASELKKVMQRGRDATSVVALTMTSTQHIP 74 Query: 71 GS 72 Sbjct: 75 AQ 76 >gi|77359719|ref|YP_339294.1| flagellar biosynthesis; cell-proximal portion of basal-body rod [Pseudoalteromonas haloplanktis TAC125] gi|76874630|emb|CAI85851.1| flagellar biosynthesis; cell-proximal portion of basal-body rod [Pseudoalteromonas haloplanktis TAC125] Length = 111 Score = 37.5 bits (85), Expect = 1.8, Method: Composition-based stats. Identities = 10/45 (22%), Positives = 22/45 (48%) Query: 21 TVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65 +A N++N DT G++ + F+ + K+ S V + ++ Sbjct: 1 MLATNIANADTPGYKAKDIDFASALKTAKSHQQGGNSMVRTNSKH 45 >gi|99082780|ref|YP_614934.1| flagellar hook-associated protein FlgK [Ruegeria sp. TM1040] gi|99039060|gb|ABF65672.1| Flagellar hook-associated protein 1 (HAP1) [Ruegeria sp. TM1040] Length = 482 Score = 37.5 bits (85), Expect = 1.8, Method: Composition-based stats. Identities = 7/102 (6%), Positives = 31/102 (30%), Gaps = 1/102 (0%) Query: 138 EIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRG 197 + + + + + + ++ + + ++ Sbjct: 381 NNYAEAMEATNTITSPGLGSGDYSAYAIAANLMTNFTQENTWAEQELAYSSAIFSDIQSR 440 Query: 198 FLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 LE ++ E+ ++ + + + +I ++ M E +R Sbjct: 441 ELEQG-VDTDSELQTLMMVETIYAANARMIQAIDEMMQELMR 481 Score = 35.2 bits (79), Expect = 9.0, Method: Composition-based stats. Identities = 6/31 (19%), Positives = 16/31 (51%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGF 34 + + + A + S ++DN++N + G+ Sbjct: 6 ALSSAMTGITAASRSTSVISDNLANALSEGY 36 >gi|114762159|ref|ZP_01441627.1| hypothetical protein 1100011001331_R2601_14510 [Pelagibaca bermudensis HTCC2601] gi|114545183|gb|EAU48186.1| hypothetical protein R2601_14510 [Roseovarius sp. HTCC2601] Length = 125 Score = 37.5 bits (85), Expect = 1.8, Method: Composition-based stats. Identities = 10/51 (19%), Positives = 17/51 (33%), Gaps = 1/51 (1%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRT-IKVKFSEVVGAIKND 51 F +A R + A N++N DT G+ F + + Sbjct: 5 LNVFQTAMALAKHSGLRQALSAQNIANADTPGYHALDIPDFEATLRGSEGS 55 >gi|262404534|ref|ZP_06081089.1| flagellar hook-associated protein FlgK [Vibrio sp. RC586] gi|262349566|gb|EEY98704.1| flagellar hook-associated protein FlgK [Vibrio sp. RC586] Length = 579 Score = 37.5 bits (85), Expect = 1.8, Method: Composition-based stats. Identities = 6/37 (16%), Positives = 14/37 (37%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N E M+ Q + + + +I + + + Sbjct: 540 SGVNLDEEAANMMKFQQAYMASSRIIQASNDTFNTIL 576 >gi|209695765|ref|YP_002263695.1| flagellar basal body rod protein FlgB [Aliivibrio salmonicida LFI1238] gi|208009718|emb|CAQ80022.1| flagellar basal-body rod protein FlgB [Aliivibrio salmonicida LFI1238] Length = 131 Score = 37.5 bits (85), Expect = 1.8, Method: Composition-based stats. Identities = 7/35 (20%), Positives = 18/35 (51%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50 QR +A N++ +T G++ + F + + + + Sbjct: 20 SQRAEMIATNIAQANTPGYKAKGMDFQKAMQSATS 54 >gi|167574707|ref|ZP_02367581.1| flagellar hook-associated protein FlgK [Burkholderia oklahomensis C6786] Length = 452 Score = 37.5 bits (85), Expect = 1.8, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 23/100 (23%), Gaps = 11/100 (11%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 IG++ A L ADN SN T G+ V + + Sbjct: 1 MNLIYIGMSGLRAANWSLRATADNTSNLATSGYSRRGVL-----------LSSGANGGVD 49 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101 L + L + LT Sbjct: 50 TSATLRFNESYKTQQLWTTNGKLGRHKASQSYLDQLERLT 89 >gi|13472573|ref|NP_104140.1| flagellar basal body rod protein FlgB [Mesorhizobium loti MAFF303099] gi|14023319|dbj|BAB49926.1| flagellar basal-body rod protein; FlgB [Mesorhizobium loti MAFF303099] Length = 126 Score = 37.5 bits (85), Expect = 1.8, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 21/45 (46%), Gaps = 1/45 (2%) Query: 15 LEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIKNDIDQKISF 58 L R S +A N++N +T G+ V+ F +V+ + + Sbjct: 17 LSVRQSAIAGNIANANTPGYTANDVEPFEKVLDRTAVSLQTTEAG 61 >gi|299822286|ref|ZP_07054172.1| flagellar basal-body rod protein FlgB [Listeria grayi DSM 20601] gi|299815815|gb|EFI83053.1| flagellar basal-body rod protein FlgB [Listeria grayi DSM 20601] Length = 121 Score = 37.2 bits (84), Expect = 1.9, Method: Composition-based stats. Identities = 10/81 (12%), Positives = 28/81 (34%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M + L+ + ++DN++N T G++ + F + + + + +A Sbjct: 1 MDNYVASLGSYISYLQSSNTLISDNIANAQTAGYKAKESSFEQNLQQAGSLRETNPKHMA 60 Query: 61 SGKEYLSKEVGSFISTGTELD 81 + + + D Sbjct: 61 GESAGSANVRITEKAGSVNED 81 >gi|302387798|ref|YP_003823620.1| flagellar basal-body rod protein FlgB [Clostridium saccharolyticum WM1] gi|302198426|gb|ADL05997.1| flagellar basal-body rod protein FlgB [Clostridium saccharolyticum WM1] Length = 126 Score = 37.2 bits (84), Expect = 1.9, Method: Composition-based stats. Identities = 12/73 (16%), Positives = 20/73 (27%), Gaps = 8/73 (10%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVV--------GAIKNDIDQKISFVASGKEYLSKE 69 + +N++N DT G++ V F + DI I+ E Sbjct: 22 KQKITMNNIANGDTPGYKAQYVTFEDEFRKRLMSGRQGTSRDIGNIINSSRHFVRNTQDE 81 Query: 70 VGSFISTGTELDF 82 D Sbjct: 82 SARMDGNNVNTDV 94 >gi|255021351|ref|ZP_05293399.1| Flagellar basal-body rod protein flgB [Acidithiobacillus caldus ATCC 51756] gi|254969214|gb|EET26728.1| Flagellar basal-body rod protein flgB [Acidithiobacillus caldus ATCC 51756] Length = 137 Score = 37.2 bits (84), Expect = 1.9, Method: Composition-based stats. Identities = 9/58 (15%), Positives = 23/58 (39%) Query: 9 LAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66 A R +A N++N +T +R + + F++ + A++ + + Sbjct: 13 ADALKVSGYRQQLLAANIANANTPNYRAVDIPFAKTLAAVQRGAEGSLPMKTDSTRQF 70 >gi|167567756|ref|ZP_02360672.1| flagellar hook-associated protein FlgK [Burkholderia oklahomensis EO147] Length = 452 Score = 37.2 bits (84), Expect = 1.9, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 16/42 (38%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 IG++ A L ADN SN T G+ V S Sbjct: 1 MNLIYIGMSGLRAANWSLRATADNTSNLATSGYSRRGVLLSS 42 >gi|284007169|emb|CBA72453.1| flagellar hook-associated protein FlgK [Arsenophonus nasoniae] Length = 545 Score = 37.2 bits (84), Expect = 1.9, Method: Composition-based stats. Identities = 21/184 (11%), Positives = 49/184 (26%), Gaps = 10/184 (5%) Query: 1 MQTSF-NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS-EVVGAIKNDIDQKISF 58 M +S N ++ + LST+ N++N+ + + + N + Sbjct: 1 MSSSLMNTAMSGLKVAQTALSTIGSNIANSKVESYHRQTTTLATDGSNNNINGVKVSGIQ 60 Query: 59 VASGKEYLSKEVGSFISTGTELDFA--------LEGDAWFALESPRGIILTRDGRFKVTD 110 + + + G +A L + L S T Sbjct: 61 REYDEFINAHYNKAVTEQGERKIYAEFALELDKLMSASDTDLASSMTEFFTSLQTLSTDA 120 Query: 111 DGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFV 170 + + M S + Q+ G I Q ++ + ++ Sbjct: 121 ASAPLRTEVINKAQAMISRFKSVEQQFNTMEQRLNGNIGQMADKVSQLAQQVAKLNGEMT 180 Query: 171 RREN 174 + + Sbjct: 181 KIKG 184 >gi|266621929|ref|ZP_06114864.1| flagellar hook-associated protein 1 [Clostridium hathewayi DSM 13479] gi|288866402|gb|EFC98700.1| flagellar hook-associated protein 1 [Clostridium hathewayi DSM 13479] Length = 87 Score = 37.2 bits (84), Expect = 1.9, Method: Composition-based stats. Identities = 5/41 (12%), Positives = 17/41 (41%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S + E M+ + ++++ L+ ++ + I + Sbjct: 43 SGVSLNEEGINMMTYNKAYSALGRLMTTMDEQLDMIINQMG 83 >gi|222833046|gb|EEE71523.1| predicted protein [Populus trichocarpa] Length = 264 Score = 37.2 bits (84), Expect = 1.9, Method: Composition-based stats. Identities = 4/41 (9%), Positives = 15/41 (36%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 S N E +++ Q + + ++ + ++ + Sbjct: 223 SGVNLDEEAAKLLQYQQSYQASAKMLQVAQSIFDSVLQTVG 263 >gi|83595981|gb|ABC25341.1| flagellar hook associated protein [uncultured marine bacterium Ant24C4] Length = 478 Score = 37.2 bits (84), Expect = 1.9, Method: Composition-based stats. Identities = 5/35 (14%), Positives = 16/35 (45%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 +S E+ +++ + Q + + +I + M + Sbjct: 442 VDSDQELQRLLRIEQSYAANARVIQTLDAMMSRLL 476 >gi|159045787|ref|YP_001534581.1| flagellar basal body rod protein FlgB [Dinoroseobacter shibae DFL 12] gi|157913547|gb|ABV94980.1| flagellar basal-body rod protein FlgB [Dinoroseobacter shibae DFL 12] Length = 126 Score = 37.2 bits (84), Expect = 2.0, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 31/85 (36%), Gaps = 5/85 (5%) Query: 5 FNIGLAAQLALEQ-RLSTVADNMSNTDTVGFR-TIKVKFSEVVGAIKNDIDQKISFVASG 62 N +A +A R +A N+++ DT G+R F++ + + + Sbjct: 7 LNTA-SAMVAHANERHGVIARNIAHADTPGYRTQDLKDFTDSYREMTSSG--LRATRDDH 63 Query: 63 KEYLSKEVGSFISTGTELDFALEGD 87 + + + T + A G+ Sbjct: 64 AFGAHRGLDLSVQTVLDTPVAPNGN 88 >gi|323495371|ref|ZP_08100448.1| flagellar hook-associated protein FlgK [Vibrio brasiliensis LMG 20546] gi|323310294|gb|EGA63481.1| flagellar hook-associated protein FlgK [Vibrio brasiliensis LMG 20546] Length = 568 Score = 37.2 bits (84), Expect = 2.0, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 13/37 (35%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N E M+ Q + + + ++ + + Sbjct: 529 SGVNLDEEAANMMKFQQAYMASSRIMQAANDTFNTIL 565 >gi|320535378|ref|ZP_08035492.1| flagellar basal-body rod protein FlgB [Treponema phagedenis F0421] gi|320147780|gb|EFW39282.1| flagellar basal-body rod protein FlgB [Treponema phagedenis F0421] Length = 136 Score = 37.2 bits (84), Expect = 2.0, Method: Composition-based stats. Identities = 8/41 (19%), Positives = 17/41 (41%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51 A R + A+N++N + F+ +V F + + Sbjct: 14 ALDVNALRYTVTANNLANAEVPEFKRTEVSFESELKRALDS 54 >gi|83311102|ref|YP_421366.1| hypothetical protein amb2003 [Magnetospirillum magneticum AMB-1] gi|82945943|dbj|BAE50807.1| hypothetical protein [Magnetospirillum magneticum AMB-1] Length = 100 Score = 37.2 bits (84), Expect = 2.0, Method: Composition-based stats. Identities = 8/40 (20%), Positives = 17/40 (42%), Gaps = 2/40 (5%) Query: 1 MQTSFN--IGLAAQLALEQRLSTVADNMSNTDTVGFRTIK 38 M +S L+ + T A+N++N T ++ + Sbjct: 1 MISSIASTTLLSGLATQSRVAQTAANNIANLTTPDYQAER 40 >gi|144900469|emb|CAM77333.1| flagellar basal-body rod protein FlgB [Magnetospirillum gryphiswaldense MSR-1] Length = 132 Score = 37.2 bits (84), Expect = 2.1, Method: Composition-based stats. Identities = 7/44 (15%), Positives = 21/44 (47%), Gaps = 3/44 (6%) Query: 8 GLAAQLALEQRLSTVADNMSNTDTVGF--RTIKV-KFSEVVGAI 48 + + +R +++N++N +T + + +K F +V+ Sbjct: 11 AQSRMDWIARRQEVLSENIANANTPKYIPKDLKPYNFKDVLDQS 54 >gi|291531969|emb|CBK97554.1| flagellar hook-associated protein FlgK [Eubacterium siraeum 70/3] Length = 503 Score = 37.2 bits (84), Expect = 2.2, Method: Composition-based stats. Identities = 15/84 (17%), Positives = 25/84 (29%), Gaps = 1/84 (1%) Query: 14 ALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSF 73 ++ L +N+SN DTVG+ ++ N I G Sbjct: 1 MAQKALDVTGNNLSNRDTVGYTRQRLDVYSSYM-NMNGIYTTKLARLGLSSQGVFASGVS 59 Query: 74 ISTGTELDFALEGDAWFALESPRG 97 + LD + F E + Sbjct: 60 QTRDDYLDKRYRDNNCFVAEYNQQ 83 >gi|229160707|ref|ZP_04288699.1| Flagellar basal-body rod protein [Bacillus cereus R309803] gi|228622722|gb|EEK79556.1| Flagellar basal-body rod protein [Bacillus cereus R309803] Length = 154 Score = 37.2 bits (84), Expect = 2.2, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 28/72 (38%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 L + +TV+ N++N +T G++ V F+E + S + S + Sbjct: 31 MNYLVTKRNTVSSNIANANTPGYQAQDVTFAEQMNKSSALYKSNSSDLNSNPDLYQTNEM 90 Query: 72 SFISTGTELDFA 83 + + +A Sbjct: 91 HLPTVNMKNTYA 102 >gi|329898291|ref|ZP_08272374.1| Flagellar basal-body rod protein FlgC [gamma proteobacterium IMCC3088] gi|328920856|gb|EGG28299.1| Flagellar basal-body rod protein FlgC [gamma proteobacterium IMCC3088] Length = 141 Score = 37.2 bits (84), Expect = 2.2, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 20/47 (42%), Gaps = 6/47 (12%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVV 45 F+I +A RL A NM+N V ++ +V F V+ Sbjct: 7 FDIAGSALAGQTTRLHATASNMANASNVSSTAEDAYKAKRVVFRTVL 53 >gi|229160702|ref|ZP_04288694.1| Flagellar hook-associated protein FlgK [Bacillus cereus R309803] gi|228622717|gb|EEK79551.1| Flagellar hook-associated protein FlgK [Bacillus cereus R309803] Length = 432 Score = 37.2 bits (84), Expect = 2.3, Method: Composition-based stats. Identities = 5/34 (14%), Positives = 12/34 (35%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEA 237 N EM ++ + F + + I+ + Sbjct: 394 VNMEEEMVNLMAFQKYFVANSKAINTMNEVFDSL 427 Score = 36.8 bits (83), Expect = 2.6, Method: Composition-based stats. Identities = 12/35 (34%), Positives = 16/35 (45%) Query: 6 NIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 N L+ LA + L T N+SN T G+ V Sbjct: 7 NTPLSGMLAAQMGLQTTKQNLSNIHTPGYVRQAVN 41 >gi|254473300|ref|ZP_05086697.1| flagellar hook-associated protein FlgK [Pseudovibrio sp. JE062] gi|211957416|gb|EEA92619.1| flagellar hook-associated protein FlgK [Pseudovibrio sp. JE062] Length = 479 Score = 37.2 bits (84), Expect = 2.3, Method: Composition-based stats. Identities = 5/48 (10%), Positives = 19/48 (39%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50 ++ ++ A ++ + N++N + G+ + +V + Sbjct: 5 SAMLTAQSSIAARSAEMAIASRNVANVNNPGYSRQEAVVQNIVSDTGS 52 >gi|296447441|ref|ZP_06889366.1| flagellar basal body rod protein FlgB [Methylosinus trichosporium OB3b] gi|296255061|gb|EFH02163.1| flagellar basal body rod protein FlgB [Methylosinus trichosporium OB3b] Length = 127 Score = 36.8 bits (83), Expect = 2.4, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 26/67 (38%), Gaps = 1/67 (1%) Query: 15 LEQRLSTVADNMSNTDTVGFRT-IKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSF 73 L R + VA N++N ++ G+R F++V+ + + S + + Sbjct: 18 LSARQALVAQNVANANSPGYRAVDLAPFTKVLDQSGLQMSETNSLHVQSAAFDPQAASPK 77 Query: 74 ISTGTEL 80 T E Sbjct: 78 ERTAWET 84 >gi|255022068|ref|ZP_05294074.1| hypothetical protein ACA_0862 [Acidithiobacillus caldus ATCC 51756] gi|254968554|gb|EET26110.1| hypothetical protein ACA_0862 [Acidithiobacillus caldus ATCC 51756] Length = 120 Score = 36.8 bits (83), Expect = 2.4, Method: Composition-based stats. Identities = 6/48 (12%), Positives = 22/48 (45%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65 +L ++ +++N T G++ + F+ + + ++ ++ Y Sbjct: 20 QLDVLSSDLANASTPGYKATNLDFARALRSALAAPGDQLGDLSRYVRY 67 >gi|90577341|ref|ZP_01233152.1| flagellar basal body rod protein [Vibrio angustum S14] gi|90440427|gb|EAS65607.1| flagellar basal body rod protein [Vibrio angustum S14] Length = 120 Score = 36.8 bits (83), Expect = 2.4, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 33/85 (38%), Gaps = 1/85 (1%) Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76 QR +A N++N DT G+ ++F +V I+ QK + + + Sbjct: 21 QRAKVLASNLANVDTPGYLAKDIRFDAIVSQIEVGKVQKSPTQLVVSDGYAVPYQNSK-D 79 Query: 77 GTELDFALEGDAWFALESPRGIILT 101 G ++ ++E + LT Sbjct: 80 GNTVELSVEQAKFTKNNMDFQSSLT 104 >gi|15964412|ref|NP_384765.1| flagellar basal body rod protein FlgB [Sinorhizobium meliloti 1021] gi|307311554|ref|ZP_07591195.1| flagellar basal body rod protein FlgB [Sinorhizobium meliloti BL225C] gi|307318909|ref|ZP_07598340.1| flagellar basal body rod protein FlgB [Sinorhizobium meliloti AK83] gi|3894106|emb|CAA11959.1| flagellar basal-body rod protein [Sinorhizobium meliloti] gi|15073589|emb|CAC45231.1| Flagellar basal-body rod protein [Sinorhizobium meliloti 1021] gi|306895323|gb|EFN26078.1| flagellar basal body rod protein FlgB [Sinorhizobium meliloti AK83] gi|306899571|gb|EFN30200.1| flagellar basal body rod protein FlgB [Sinorhizobium meliloti BL225C] Length = 126 Score = 36.8 bits (83), Expect = 2.4, Method: Composition-based stats. Identities = 10/33 (30%), Positives = 17/33 (51%), Gaps = 1/33 (3%) Query: 18 RLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIK 49 R + VA N++N +T +R V+ F V+ Sbjct: 20 RQNVVAGNIANANTPHYRAKDVQPFESVLQNTG 52 >gi|153949189|ref|YP_001399631.1| flagellar basal-body rod protein FlgB [Yersinia pseudotuberculosis IP 31758] gi|152960684|gb|ABS48145.1| flagellar basal-body rod protein FlgB [Yersinia pseudotuberculosis IP 31758] Length = 121 Score = 36.8 bits (83), Expect = 2.4, Method: Composition-based stats. Identities = 12/91 (13%), Positives = 29/91 (31%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A R ++ N++N +T F+ + F+ + K S + + ++ Sbjct: 15 AMQLRLTRAELLSANLANVNTPNFQAKDIDFAAEMQRAKRGNGVMASSDLTSPKIKYRQP 74 Query: 71 GSFISTGTELDFALEGDAWFALESPRGIILT 101 G + +E + L+ Sbjct: 75 YQPSLDGNTVALNVEQAEFSKNALDYQTSLS 105 >gi|120598229|ref|YP_962803.1| flagellar basal body rod protein FlgB [Shewanella sp. W3-18-1] gi|120558322|gb|ABM24249.1| flagellar basal-body rod protein FlgB [Shewanella sp. W3-18-1] Length = 134 Score = 36.8 bits (83), Expect = 2.4, Method: Composition-based stats. Identities = 8/25 (32%), Positives = 14/25 (56%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFS 42 R ++ N++N DT ++ V FS Sbjct: 22 RAEVISSNIANADTPHYKARDVDFS 46 >gi|146343395|ref|YP_001208443.1| putative flagellar basal-body rod protein (flgC) [Bradyrhizobium sp. ORS278] gi|146196201|emb|CAL80228.1| putative flagellar basal-body rod protein (flgC) [Bradyrhizobium sp. ORS278] Length = 136 Score = 36.8 bits (83), Expect = 2.4, Method: Composition-based stats. Identities = 8/33 (24%), Positives = 15/33 (45%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG 33 M + ++ A +RL A N++N + G Sbjct: 1 MSPIASNAVSGMNAAARRLEVSASNVANARSTG 33 >gi|126738583|ref|ZP_01754288.1| flagellar basal-body rod protein; FlgB [Roseobacter sp. SK209-2-6] gi|126720382|gb|EBA17088.1| flagellar basal-body rod protein; FlgB [Roseobacter sp. SK209-2-6] Length = 129 Score = 36.8 bits (83), Expect = 2.4, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 23/52 (44%), Gaps = 1/52 (1%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIKNDI 52 F I + +R + V++N++N DT G+ +K F E+ + Sbjct: 5 LNVFKIAYSMATHAGKRQALVSENIANADTPGYHAKDIKPFKEIYASGTRPG 56 >gi|85710162|ref|ZP_01041227.1| flagellar cell-proximal portion protein [Erythrobacter sp. NAP1] gi|85688872|gb|EAQ28876.1| flagellar cell-proximal portion protein [Erythrobacter sp. NAP1] Length = 125 Score = 36.8 bits (83), Expect = 2.5, Method: Composition-based stats. Identities = 6/36 (16%), Positives = 19/36 (52%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + EM +++ +++ ++ + ++ MLE +R Sbjct: 88 VDESAEMVEIMDSARQYQNMVQALQTAKQLMLETLR 123 >gi|149908753|ref|ZP_01897414.1| putative flagellar hook-associated protein [Moritella sp. PE36] gi|149808295|gb|EDM68234.1| putative flagellar hook-associated protein [Moritella sp. PE36] Length = 443 Score = 36.8 bits (83), Expect = 2.5, Method: Composition-based stats. Identities = 7/38 (18%), Positives = 15/38 (39%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S N E ++ Q +N+ +I ++ +R Sbjct: 404 SGVNLDEEGISLMKYQQSYNANAKVISMADQLFSTLLR 441 >gi|148554183|ref|YP_001261765.1| flagellar hook-associated protein FlgK [Sphingomonas wittichii RW1] gi|148499373|gb|ABQ67627.1| flagellar hook-associated protein FlgK [Sphingomonas wittichii RW1] Length = 450 Score = 36.8 bits (83), Expect = 2.5, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 23/43 (53%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 M IG + +A L+TV +N+SN +T G+ KV +E Sbjct: 1 MSDLLQIGRSGVVAYRTALATVGENVSNAETEGYSRRKVVLNE 43 >gi|302037601|ref|YP_003797923.1| flagellar basal-body rod protein FlgB [Candidatus Nitrospira defluvii] gi|300605665|emb|CBK41998.1| Flagellar basal-body rod protein FlgB [Candidatus Nitrospira defluvii] Length = 135 Score = 36.8 bits (83), Expect = 2.5, Method: Composition-based stats. Identities = 10/65 (15%), Positives = 23/65 (35%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTG 77 R +A N++N +T +R + F + + + + + + + G G Sbjct: 21 RQQVIAANIANEETPKYRAKDLNFGQALANAQQGKLPISLVSTNAQHFGPQGTGYQRVLG 80 Query: 78 TELDF 82 D Sbjct: 81 QLEDV 85 >gi|325474122|gb|EGC77310.1| hypothetical protein HMPREF9353_01660 [Treponema denticola F0402] Length = 270 Score = 36.8 bits (83), Expect = 2.6, Method: Composition-based stats. Identities = 26/180 (14%), Positives = 53/180 (29%), Gaps = 28/180 (15%) Query: 28 NTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGD 87 N +T+G++ + + + G +L FAL GD Sbjct: 35 NINTIGYK----------------------PIKTIQNNYVFTQGHLSEFKADLSFALVGD 72 Query: 88 AWFALESP-RGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKG 146 +F + + R F + + G + + Y + + I + + Sbjct: 73 GFFKVYNEKEEEFYMRCCFFIINEYGKFQTYNNMYLSKYINNNNKIINKAYVESSGKLIV 132 Query: 147 EISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANS 206 + + LY D EN + + + G GF+E S ++ Sbjct: 133 TYDDQTTESIMIELYVPDNGS-----ENICFGNYYSFSKSKRIEGTKFLNGFIELSAVDA 187 >gi|27904802|ref|NP_777928.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|46395818|sp|Q89AH9|FLGC_BUCBP RecName: Full=Flagellar basal-body rod protein flgC gi|27904200|gb|AAO27033.1| flagellar basal-body rod protein FlgC [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 136 Score = 36.8 bits (83), Expect = 2.6, Method: Composition-based stats. Identities = 9/76 (11%), Positives = 30/76 (39%) Query: 164 DMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSI 223 + + G V+ + + S + G+ + SN + M E I ++ + + Sbjct: 58 ENNVGGVKMHTVAGDTSSLKSIYNPNSPIADSNGYSKVSNVDIMSETINAITASKNYQTN 117 Query: 224 TTLIDENEKSMLEAIR 239 +++ + +++ + Sbjct: 118 LEILNTTKNMIMKTLT 133 >gi|328545490|ref|YP_004305599.1| flagellar hook-associated protein K [polymorphum gilvum SL003B-26A1] gi|326415231|gb|ADZ72294.1| Flagellar hook-associated protein K [Polymorphum gilvum SL003B-26A1] Length = 496 Score = 36.8 bits (83), Expect = 2.6, Method: Composition-based stats. Identities = 13/81 (16%), Positives = 29/81 (35%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 + + +A A + +TV+ N++ G+ V S VV A ++ +A Sbjct: 6 ALQVAQSALAARQTETATVSRNIAGAQDPGYTRKSVVLSTVVSASGQTGGVRVDGIARTT 65 Query: 64 EYLSKEVGSFISTGTELDFAL 84 + ++ A+ Sbjct: 66 DSALYNSLVRATSVATSQQAI 86 >gi|258404781|ref|YP_003197523.1| flagellar basal-body rod protein FlgB [Desulfohalobium retbaense DSM 5692] gi|257797008|gb|ACV67945.1| flagellar basal-body rod protein FlgB [Desulfohalobium retbaense DSM 5692] Length = 136 Score = 36.8 bits (83), Expect = 2.6, Method: Composition-based stats. Identities = 11/80 (13%), Positives = 24/80 (30%), Gaps = 5/80 (6%) Query: 2 QTSFNIGLAAQLALEQRL-----STVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56 L L + N++N +T G+ + ++F E + A + QK+ Sbjct: 3 DNVLFGSTIGLLEQSLNLRARNHEMLTSNIANAETPGYASQHLQFEEQLRAAFDPEAQKM 62 Query: 57 SFVASGKEYLSKEVGSFIST 76 ++ Sbjct: 63 EATHEDHFGFVDDINQVDGE 82 >gi|315498436|ref|YP_004087240.1| flagellar basal-body rod protein flgb [Asticcacaulis excentricus CB 48] gi|315416448|gb|ADU13089.1| flagellar basal-body rod protein FlgB [Asticcacaulis excentricus CB 48] Length = 137 Score = 36.8 bits (83), Expect = 2.7, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 23/63 (36%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 L QR VA N++N T GF+ +K + +K +Q ++ G Sbjct: 16 MTWLGQRQKLVAQNVANASTPGFKPRDLKALDFASVLKGQQEQTELGLSVTNAGHMNVEG 75 Query: 72 SFI 74 Sbjct: 76 GNN 78 >gi|326404526|ref|YP_004284608.1| flagellar basal-body rod protein FlgB [Acidiphilium multivorum AIU301] gi|325051388|dbj|BAJ81726.1| flagellar basal-body rod protein FlgB [Acidiphilium multivorum AIU301] Length = 126 Score = 36.8 bits (83), Expect = 2.8, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 22/50 (44%), Gaps = 1/50 (2%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIK-VKFSEVVGAIKN 50 + + L Q S +A N++N DT G+ + V FS+ + N Sbjct: 3 LNLIGLAADRLVYLAQSQSVLAQNIANIDTPGYVSRMPVAFSDTLNGTGN 52 >gi|218662054|ref|ZP_03517984.1| hypothetical protein RetlI_22525 [Rhizobium etli IE4771] Length = 88 Score = 36.8 bits (83), Expect = 2.8, Method: Composition-based stats. Identities = 6/23 (26%), Positives = 13/23 (56%) Query: 12 QLALEQRLSTVADNMSNTDTVGF 34 A R+ +A+N++N+ T + Sbjct: 1 MRAQTTRIGAIANNIANSSTPDY 23 >gi|257141419|ref|ZP_05589681.1| flagellar basal-body rod protein FlgB [Burkholderia thailandensis E264] Length = 109 Score = 36.8 bits (83), Expect = 2.8, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 28/92 (30%), Gaps = 2/92 (2%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVG 71 +R +A N++N DT G++ + F + A Sbjct: 1 MKLRAERTKIIASNLANLDTPGYQAQDLDFKRSLAEAAGGGAGARLGDAPAGGVTLGYRV 60 Query: 72 SFI--STGTELDFALEGDAWFALESPRGIILT 101 + G ++ +E A+ + LT Sbjct: 61 PYQAAQDGNTVELGIEQAAFAQNAIDFQMSLT 92 >gi|88811798|ref|ZP_01127052.1| flagellar basal body rod protein [Nitrococcus mobilis Nb-231] gi|88791189|gb|EAR22302.1| flagellar basal body rod protein [Nitrococcus mobilis Nb-231] Length = 131 Score = 36.8 bits (83), Expect = 2.8, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 19/43 (44%), Gaps = 2/43 (4%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQ 54 A +L +A N++N DT ++ FS V+ + D Sbjct: 18 LRAKRTQL--LASNIANADTPHYKARDFDFSNVLHQARADNAT 58 >gi|296531770|ref|ZP_06894592.1| flagellar basal-body rod protein [Roseomonas cervicalis ATCC 49957] gi|296267909|gb|EFH13714.1| flagellar basal-body rod protein [Roseomonas cervicalis ATCC 49957] Length = 133 Score = 36.8 bits (83), Expect = 2.9, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 3/42 (7%) Query: 1 MQTSFN---IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39 M + I A L +R + +A N+++ DT +R V Sbjct: 1 MLDGIDVFRISGARMRHLAERQNVLAQNIAHADTPLYRARDV 42 >gi|241889275|ref|ZP_04776578.1| conserved hypothetical protein [Gemella haemolysans ATCC 10379] gi|241864112|gb|EER68491.1| conserved hypothetical protein [Gemella haemolysans ATCC 10379] Length = 462 Score = 36.8 bits (83), Expect = 2.9, Method: Composition-based stats. Identities = 12/103 (11%), Positives = 24/103 (23%) Query: 107 KVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMS 166 + + + G P + + N G+ G Sbjct: 287 QAPQGFNPNAQHGGQPQGFNPNAQHGGQPQGFNPNAQHGGQPQGFNPNAQHGGQPQGFNP 346 Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYE 209 + G +PN ++G E + N + E Sbjct: 347 NAQHGGQPQGFNPNTQHGGQPQGFNPNAQQGVQEQAVVNEVQE 389 >gi|218460744|ref|ZP_03500835.1| flagellar basal body rod protein FlgB [Rhizobium etli Kim 5] Length = 142 Score = 36.8 bits (83), Expect = 2.9, Method: Composition-based stats. Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 1/29 (3%) Query: 18 RLSTVADNMSNTDTVGFRTIKVK-FSEVV 45 R VA N++N +T FR V F V+ Sbjct: 20 RQQVVAGNIANANTPKFRAKDVTPFDAVL 48 >gi|331006031|ref|ZP_08329373.1| Flagellar basal-body rod protein FlgB [gamma proteobacterium IMCC1989] gi|330420160|gb|EGG94484.1| Flagellar basal-body rod protein FlgB [gamma proteobacterium IMCC1989] Length = 133 Score = 36.8 bits (83), Expect = 2.9, Method: Composition-based stats. Identities = 10/64 (15%), Positives = 22/64 (34%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIS 75 R +A+N++N DT G++ + F ++G + + + S Sbjct: 20 SDRAGLLAENLANADTPGYKAKDIDFKGILGGQVQMQSSGNQMKTTHSNHFAITNNSSEY 79 Query: 76 TGTE 79 Sbjct: 80 DMLY 83 >gi|254522823|ref|ZP_05134878.1| conserved hypothetical protein [Stenotrophomonas sp. SKA14] gi|219720414|gb|EED38939.1| conserved hypothetical protein [Stenotrophomonas sp. SKA14] Length = 99 Score = 36.8 bits (83), Expect = 2.9, Method: Composition-based stats. Identities = 8/32 (25%), Positives = 13/32 (40%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTV 32 M + L A +Q + A N++N T Sbjct: 1 MNNVMGMALGGMRAAQQGVQVAAHNVANLATP 32 >gi|238762362|ref|ZP_04623333.1| Flagellar basal-body rod protein FlgB [Yersinia kristensenii ATCC 33638] gi|238699347|gb|EEP92093.1| Flagellar basal-body rod protein FlgB [Yersinia kristensenii ATCC 33638] Length = 124 Score = 36.8 bits (83), Expect = 3.0, Method: Composition-based stats. Identities = 13/100 (13%), Positives = 30/100 (30%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 Q + + AA R ++ N++N +T F+ + F + K + Sbjct: 9 QKALGVHPAAMQLRLTRAELLSANLANVNTPNFQAKDIDFGAEMQRAKQGSVGIATSQRL 68 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101 + + G + +E + L+ Sbjct: 69 SPQMKYRLPYQPSQDGNTVALNVEQAEFSKNALDYQTSLS 108 >gi|312115252|ref|YP_004012848.1| flagellar basal body rod protein [Rhodomicrobium vannielii ATCC 17100] gi|311220381|gb|ADP71749.1| flagellar basal body rod protein [Rhodomicrobium vannielii ATCC 17100] Length = 124 Score = 36.8 bits (83), Expect = 3.0, Method: Composition-based stats. Identities = 10/63 (15%), Positives = 23/63 (36%), Gaps = 1/63 (1%) Query: 21 TVADNMSNTDTVGFRTIKVK-FSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTE 79 +A N++N +T G++ + F V+ I+ + + + G E Sbjct: 21 VLAQNVANANTPGYKAANIVPFEAVMHDIRLQMTSTSPMHLRAEVSQISSTAQEDAAGGE 80 Query: 80 LDF 82 + Sbjct: 81 TFY 83 >gi|57167573|ref|ZP_00366713.1| flagellar basal-body rod protein FlgB [Campylobacter coli RM2228] gi|305433079|ref|ZP_07402235.1| flagellar basal-body rod protein FlgB [Campylobacter coli JV20] gi|57020695|gb|EAL57359.1| flagellar basal-body rod protein FlgB [Campylobacter coli RM2228] gi|304443780|gb|EFM36437.1| flagellar basal-body rod protein FlgB [Campylobacter coli JV20] Length = 143 Score = 36.8 bits (83), Expect = 3.0, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 19/43 (44%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 +A R + N++N DT ++ ++F + N+I Sbjct: 13 SALAGRNLRNQLINANLANVDTPFYKARDIEFETALVNRANEI 55 >gi|308050027|ref|YP_003913593.1| flagellar basal-body rod protein FlgB [Ferrimonas balearica DSM 9799] gi|307632217|gb|ADN76519.1| flagellar basal-body rod protein FlgB [Ferrimonas balearica DSM 9799] Length = 116 Score = 36.8 bits (83), Expect = 3.1, Method: Composition-based stats. Identities = 7/69 (10%), Positives = 24/69 (34%) Query: 21 TVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTEL 80 ++ N++N +T G+ + FS ++ ++ ++ + + + Sbjct: 25 VLSGNLANAETPGYLARDLDFSRLMTQLERGQATDRNYDHAYRVPYQTSADGNTVELGQE 84 Query: 81 DFALEGDAW 89 +A Sbjct: 85 QARFSQNAM 93 >gi|304392509|ref|ZP_07374449.1| flagellar basal-body rod protein FlgB [Ahrensia sp. R2A130] gi|303295139|gb|EFL89499.1| flagellar basal-body rod protein FlgB [Ahrensia sp. R2A130] Length = 133 Score = 36.8 bits (83), Expect = 3.1, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 21/49 (42%), Gaps = 1/49 (2%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIKNDIDQKISFVASGK 63 E R VA N+++ DT GFR V F+ ++ A + + Sbjct: 31 EARQKVVAANIAHADTPGFRGSDVAPFASLMSADAKPVGMATTHAGHMV 79 >gi|149184205|ref|ZP_01862523.1| flagellar basal-body rod protein FlgC [Erythrobacter sp. SD-21] gi|148831525|gb|EDL49958.1| flagellar basal-body rod protein FlgC [Erythrobacter sp. SD-21] Length = 113 Score = 36.4 bits (82), Expect = 3.2, Method: Composition-based stats. Identities = 7/36 (19%), Positives = 20/36 (55%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + EM +M+ ++++ ++ + ++ MLE +R Sbjct: 76 VDENAEMVEMLEASRQYRNMVEALSTAKQLMLETMR 111 >gi|288553068|ref|YP_003425003.1| flagellar basal body rod protein FlgB [Bacillus pseudofirmus OF4] gi|288544228|gb|ADC48111.1| flagellar basal body rod protein FlgB [Bacillus pseudofirmus OF4] Length = 131 Score = 36.4 bits (82), Expect = 3.2, Method: Composition-based stats. Identities = 8/40 (20%), Positives = 16/40 (40%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50 + R ++DN++N T ++ KV F + Sbjct: 15 GLDGSQLRQRAISDNIANAGTPNYQAKKVSFKHTLNEAMG 54 >gi|298530765|ref|ZP_07018167.1| protein of unknown function DUF1078 domain protein [Desulfonatronospira thiodismutans ASO3-1] gi|298510139|gb|EFI34043.1| protein of unknown function DUF1078 domain protein [Desulfonatronospira thiodismutans ASO3-1] Length = 124 Score = 36.4 bits (82), Expect = 3.2, Method: Composition-based stats. Identities = 10/45 (22%), Positives = 17/45 (37%), Gaps = 3/45 (6%) Query: 8 GLAAQLALEQ---RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK 49 ++ A + R A N++N +T GF +V E Sbjct: 4 SISGMGAFQSFGLRQQASAHNVANVNTRGFEPSRVVLEEAPEHQG 48 >gi|309388244|gb|ADO78728.1| RNA-dependent RNA polymerase [Rotavirus A human/Belgium/BE00031/2008/G1P[8]] Length = 1088 Score = 36.4 bits (82), Expect = 3.2, Method: Composition-based stats. Identities = 10/79 (12%), Positives = 27/79 (34%), Gaps = 3/79 (3%) Query: 1 MQTSFNIGLAA-QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFV 59 M + L++ A+ L +++++N + + ++ F +V + N Sbjct: 130 MDPAILTSLSSNLNAVMFWLERHSNDVANANKI-YKRRLDLF-TIVASTINKYGVPRHNE 187 Query: 60 ASGKEYLSKEVGSFISTGT 78 EY + + Sbjct: 188 KYRYEYEVMKDKPYYLVTW 206 >gi|283784870|ref|YP_003364735.1| flagellar hook-associated protein 1 [Citrobacter rodentium ICC168] gi|282948324|emb|CBG87909.1| flagellar hook-associated protein 1 [Citrobacter rodentium ICC168] Length = 546 Score = 36.4 bits (82), Expect = 3.2, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 M + FN ++ A + L T ++N+++ + G+ ++ + Sbjct: 1 MSSLFNNAMSGLNAAQAALVTASNNINSYNVAGYTRQTTIMAQANSTLGAGG 52 >gi|167750617|ref|ZP_02422744.1| hypothetical protein EUBSIR_01594 [Eubacterium siraeum DSM 15702] gi|167656296|gb|EDS00426.1| hypothetical protein EUBSIR_01594 [Eubacterium siraeum DSM 15702] Length = 519 Score = 36.4 bits (82), Expect = 3.2, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 26/85 (30%), Gaps = 1/85 (1%) Query: 13 LALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGS 72 ++ L +N+SN DTVG+ ++ N I G Sbjct: 16 QMAQKALDVTGNNLSNRDTVGYTRQRLDVYSSYM-NMNGIYTTKLARLGLSSQGVFASGV 74 Query: 73 FISTGTELDFALEGDAWFALESPRG 97 + LD ++ + E + Sbjct: 75 SQTRDDYLDKRYRDNSCYVSEYNQQ 99 >gi|74101655|gb|AAZ99745.1| FlgBL [Aeromonas hydrophila] Length = 129 Score = 36.4 bits (82), Expect = 3.2, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 32/80 (40%), Gaps = 4/80 (5%) Query: 1 MQTSFNIGLA----AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56 M SF+ L A R +A N++N DT G+ V + ++G + + Sbjct: 1 MSISFDSALGVHPYALDVRADRARILAGNLANVDTPGYLARDVDYKTILGRVAQQVATGD 60 Query: 57 SFVASGKEYLSKEVGSFIST 76 + A + ++ ++ + Sbjct: 61 ASAAISQGVMANDMQHPLYR 80 >gi|89068727|ref|ZP_01156113.1| flagellar hook-associated protein [Oceanicola granulosus HTCC2516] gi|89045690|gb|EAR51752.1| flagellar hook-associated protein [Oceanicola granulosus HTCC2516] Length = 470 Score = 36.4 bits (82), Expect = 3.3, Method: Composition-based stats. Identities = 10/37 (27%), Positives = 18/37 (48%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV 39 + + G + LA+ + T A N++N T G+ V Sbjct: 5 NALSAGRSGLLAVSRWSETTAGNVANAKTQGYVRRDV 41 >gi|148261125|ref|YP_001235252.1| flagellar basal body protein-like protein [Acidiphilium cryptum JF-5] gi|146402806|gb|ABQ31333.1| Flagellar basal body protein-like protein [Acidiphilium cryptum JF-5] Length = 126 Score = 36.4 bits (82), Expect = 3.3, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 22/50 (44%), Gaps = 1/50 (2%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIK-VKFSEVVGAIKN 50 + + L Q S +A N++N DT G+ + V FS+ + N Sbjct: 3 LNLIGLAADRLVYLAQSQSVLAQNIANIDTPGYVSRMPVAFSDTLNGTGN 52 >gi|57238272|ref|YP_178647.1| flagellar basal body rod protein FlgB [Campylobacter jejuni RM1221] gi|148925899|ref|ZP_01809586.1| putative flagellar basal-body rod protein [Campylobacter jejuni subsp. jejuni CG8486] gi|205355384|ref|ZP_03222155.1| putative flagellar basaL body rod protein [Campylobacter jejuni subsp. jejuni CG8421] gi|57167076|gb|AAW35855.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni RM1221] gi|145844885|gb|EDK21989.1| putative flagellar basal-body rod protein [Campylobacter jejuni subsp. jejuni CG8486] gi|205346618|gb|EDZ33250.1| putative flagellar basaL body rod protein [Campylobacter jejuni subsp. jejuni CG8421] gi|284925791|gb|ADC28143.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni subsp. jejuni IA3902] gi|315057946|gb|ADT72275.1| Flagellar basal-body rod protein FlgB [Campylobacter jejuni subsp. jejuni S3] Length = 143 Score = 36.4 bits (82), Expect = 3.3, Method: Composition-based stats. Identities = 10/45 (22%), Positives = 20/45 (44%), Gaps = 1/45 (2%) Query: 9 LAAQLALEQ-RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 + LA R + N++N DT ++ ++F + N+I Sbjct: 11 VTGALAGRNLRNQLINANLANVDTPFYKARDIEFETALVNRANEI 55 >gi|300722685|ref|YP_003711975.1| flagellar basal-body rod cell-proximal protein [Xenorhabdus nematophila ATCC 19061] gi|297629192|emb|CBJ89788.1| flagellar biosynthesis; cell-proximal portion of basal-body rod [Xenorhabdus nematophila ATCC 19061] Length = 138 Score = 36.4 bits (82), Expect = 3.3, Method: Composition-based stats. Identities = 8/60 (13%), Positives = 19/60 (31%) Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76 QR ++ N++N DT G++ + F+ + + + Sbjct: 21 QRQEILSANIANADTPGYQARDIDFAAQLKKTMAHGRVTGNGIGLTLTSERHIPIQPQKR 80 >gi|296122953|ref|YP_003630731.1| flagellar hook-associated protein FlgK [Planctomyces limnophilus DSM 3776] gi|296015293|gb|ADG68532.1| flagellar hook-associated protein FlgK [Planctomyces limnophilus DSM 3776] Length = 566 Score = 36.4 bits (82), Expect = 3.4, Method: Composition-based stats. Identities = 6/37 (16%), Positives = 15/37 (40%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 + + + + ++N++N +T GF V Sbjct: 6 ALAVASRSLEIFSASVQVSSNNIANANTKGFVRDAVS 42 >gi|145297452|ref|YP_001140293.1| lateral flagellar basal body protein, LfgB [Aeromonas salmonicida subsp. salmonicida A449] gi|142850224|gb|ABO88545.1| lateral flagellar basal body protein, LfgB [Aeromonas salmonicida subsp. salmonicida A449] Length = 129 Score = 36.4 bits (82), Expect = 3.4, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 32/80 (40%), Gaps = 4/80 (5%) Query: 1 MQTSFNIGLA----AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKI 56 M SF+ L A R +A N++N DT G+ V + ++G + + Sbjct: 1 MSISFDSALGVHPYALDVRADRARILAGNLANVDTPGYLARDVDYKTILGRVAQQVATGD 60 Query: 57 SFVASGKEYLSKEVGSFIST 76 + + + ++ ++ + Sbjct: 61 ASASISQGVMANDMQHPLYR 80 >gi|110632659|ref|YP_672867.1| flagellar basal body rod protein FlgB [Mesorhizobium sp. BNC1] gi|110283643|gb|ABG61702.1| flagellar basal-body rod protein flgB [Chelativorans sp. BNC1] Length = 135 Score = 36.4 bits (82), Expect = 3.4, Method: Composition-based stats. Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 1/36 (2%) Query: 15 LEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIK 49 L R + VA N++N +T ++ + V+ F +V+ + Sbjct: 27 LSVRQAAVAGNIANINTPSYKALDVEPFEKVLDGTR 62 >gi|295097205|emb|CBK86295.1| flagellar basal-body rod protein FlgC [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 134 Score = 36.4 bits (82), Expect = 3.5, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 6/45 (13%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVG------FRTIKVKFSE 43 F+I +A A +RL+ A NM+N D+V +R +V F Sbjct: 7 FDISGSAMAAQSKRLNVSASNMANADSVAGPDGQPYRARQVMFEA 51 >gi|322421738|ref|YP_004200961.1| flagellar basal-body rod protein FlgB [Geobacter sp. M18] gi|320128125|gb|ADW15685.1| flagellar basal-body rod protein FlgB [Geobacter sp. M18] Length = 139 Score = 36.4 bits (82), Expect = 3.5, Method: Composition-based stats. Identities = 6/47 (12%), Positives = 19/47 (40%) Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +R + ++ N++N +T G+ + F + + + + Sbjct: 23 KRHTMISANLANVETPGYTASDISFEGQLKSALKEGPKSGGVTHPRH 69 >gi|330501135|ref|YP_004378004.1| flagellar basal body rod protein FlgC [Pseudomonas mendocina NK-01] gi|328915421|gb|AEB56252.1| flagellar basal body rod protein FlgC [Pseudomonas mendocina NK-01] Length = 142 Score = 36.4 bits (82), Expect = 3.5, Method: Composition-based stats. Identities = 6/42 (14%), Positives = 20/42 (47%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 G++ ++ + + EM M+ T+ F + +++ + + Sbjct: 96 GYVFYADIDQIEEMTDMMSATRSFETSVEVLNRLKSMQQGLL 137 >gi|73999587|ref|XP_544177.2| PREDICTED: similar to swan [Canis familiaris] Length = 814 Score = 36.4 bits (82), Expect = 3.5, Method: Composition-based stats. Identities = 16/129 (12%), Positives = 31/129 (24%) Query: 34 FRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFALEGDAWFALE 93 F+ + F ++ ++ D E + E DF + F Sbjct: 540 FKQTQADFRQLDRSLPEDFRHSPEDFRRSPEDFRRPREEHFRRPLEEDFRRPWEEGFRYP 599 Query: 94 SPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASVPIQIPQKDEIFNVGEKGEISQKGK 153 R+ ++ + G P P I + + G+ Sbjct: 600 REEDFRYPREEDWRRPPEEDFRRTLGGRPRSISGGRPRSISGGRPRSTSAGRPRSTSAGR 659 Query: 154 VIATMGLYS 162 T G Sbjct: 660 PRNTSGGRR 668 >gi|56551510|ref|YP_162349.1| flagellar basal-body rod protein FlgB [Zymomonas mobilis subsp. mobilis ZM4] gi|241761154|ref|ZP_04759243.1| flagellar basal-body rod protein FlgB [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|260752883|ref|YP_003225776.1| flagellar basal-body rod protein FlgB [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|4378861|gb|AAD19729.1| flagellar basal-body rod protein [Zymomonas mobilis subsp. mobilis ZM4] gi|56543084|gb|AAV89238.1| flagellar basal-body rod protein FlgB [Zymomonas mobilis subsp. mobilis ZM4] gi|241374773|gb|EER64234.1| flagellar basal-body rod protein FlgB [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|258552246|gb|ACV75192.1| flagellar basal-body rod protein FlgB [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 117 Score = 36.4 bits (82), Expect = 3.5, Method: Composition-based stats. Identities = 10/66 (15%), Positives = 30/66 (45%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A + QR++ +A N++N T ++ + F++ +G + + + + + + + Sbjct: 14 ALVLRNQRMAMLASNIANAATPNYKARDIDFNKALGEATSGNETEEAVNDAMGYRVPIDK 73 Query: 71 GSFIST 76 +T Sbjct: 74 SIDGNT 79 >gi|189426356|ref|YP_001953533.1| flagellar basal-body rod protein FlgB [Geobacter lovleyi SZ] gi|189422615|gb|ACD97013.1| flagellar basal-body rod protein FlgB [Geobacter lovleyi SZ] Length = 146 Score = 36.4 bits (82), Expect = 3.5, Method: Composition-based stats. Identities = 6/63 (9%), Positives = 20/63 (31%) Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76 + + ++ N++N +T G+ ++F + + + + Sbjct: 23 RNQNLISSNIANAETPGYTPKSLEFEQQLQSAVKKSTTRRGDSQFSGATTHPAHIPLRGG 82 Query: 77 GTE 79 G Sbjct: 83 GER 85 >gi|224825774|ref|ZP_03698878.1| flagellar basal-body rod protein FlgB [Lutiella nitroferrum 2002] gi|224601998|gb|EEG08177.1| flagellar basal-body rod protein FlgB [Lutiella nitroferrum 2002] Length = 118 Score = 36.4 bits (82), Expect = 3.7, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 18/42 (42%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 + +I A +R +A N++N T G++ V F Sbjct: 6 DKALDIHPEALKLRAERTKVLASNIANETTPGYQARDVDFRS 47 >gi|312882662|ref|ZP_07742399.1| flagellar basal body rod protein FlgB [Vibrio caribbenthicus ATCC BAA-2122] gi|309369623|gb|EFP97138.1| flagellar basal body rod protein FlgB [Vibrio caribbenthicus ATCC BAA-2122] Length = 132 Score = 36.4 bits (82), Expect = 3.7, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 20/37 (54%) Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 + ++ N++ ++T G+++ + F + A ++ + Sbjct: 21 RNAELISTNIAQSNTPGYKSKGMDFQRALQAATSEAN 57 >gi|167750733|ref|ZP_02422860.1| hypothetical protein EUBSIR_01711 [Eubacterium siraeum DSM 15702] gi|167656412|gb|EDS00542.1| hypothetical protein EUBSIR_01711 [Eubacterium siraeum DSM 15702] gi|291532067|emb|CBK97652.1| flagellar basal-body rod protein FlgB [Eubacterium siraeum 70/3] gi|291558196|emb|CBL35313.1| flagellar basal-body rod protein FlgB [Eubacterium siraeum V10Sc8a] Length = 127 Score = 36.4 bits (82), Expect = 3.7, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 29/78 (37%), Gaps = 2/78 (2%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 L Q+ +A N++N DT G+ + F V+ + + + E+ Sbjct: 15 GLSVLWQKQQIIAQNIANQDTPGYNCKYLDFYAVLKDRMES--TSVVGGKAKEGSKQVEL 72 Query: 71 GSFISTGTELDFALEGDA 88 + + T + +G+ Sbjct: 73 ATRVYEDTATNTQPDGNN 90 >gi|51894116|ref|YP_076807.1| flagellar hook-associated protein [Symbiobacterium thermophilum IAM 14863] gi|51857805|dbj|BAD41963.1| flagellar hook-associated protein [Symbiobacterium thermophilum IAM 14863] Length = 558 Score = 36.4 bits (82), Expect = 3.7, Method: Composition-based stats. Identities = 4/38 (10%), Positives = 15/38 (39%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 + E+ M + F ++ ++ ++ + I + Sbjct: 520 VSIDEEIALMTAEQKAFAAVARVLTVLDEMLQTLINAV 557 >gi|167576668|ref|ZP_02369542.1| flagellar hook-associated protein FlgK [Burkholderia thailandensis TXDOH] Length = 452 Score = 36.4 bits (82), Expect = 3.8, Method: Composition-based stats. Identities = 23/195 (11%), Positives = 51/195 (26%), Gaps = 1/195 (0%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 IG++ A Q L + NM+N+ + V S + + + S Sbjct: 1 MNIIYIGMSGIRAASQSLLATSQNMANSANNEYSRRGVLLSTGLTGGVDASG-LLRLNES 59 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKY 121 K + G + +P + G+L +ASG Sbjct: 60 YKTQQLWQAGGQYGRYNAAQSYFDQLEALFGGNPVDGKTKANDLGFGKFIGALEAASGNP 119 Query: 122 PVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNI 181 + + I + ++ + + I + +V+ G + Sbjct: 120 GDSVLRNGVINAANTMTKQFNNMRSVLTNQLRSIEQQRVTTVERVNGLAKTVAELNGKIA 179 Query: 182 PPTPLEDLSGVTVKR 196 + + Sbjct: 180 AGQGSGADVSALMDQ 194 >gi|148558589|ref|YP_001258003.1| flagellar hook-associated protein FlgK [Brucella ovis ATCC 25840] gi|148369874|gb|ABQ62746.1| flagellar hook-associated protein FlgK [Brucella ovis ATCC 25840] Length = 464 Score = 36.4 bits (82), Expect = 3.8, Method: Composition-based stats. Identities = 5/43 (11%), Positives = 17/43 (39%), Gaps = 3/43 (6%) Query: 202 SN---ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 SN + EM ++ L + + + ++ + + + + Sbjct: 422 SNATGVDIDTEMALLLDLEHSYQASSRVLTTVSAMLDDLLNAV 464 >gi|291558291|emb|CBL35408.1| flagellar hook-associated protein FlgK [Eubacterium siraeum V10Sc8a] Length = 503 Score = 36.4 bits (82), Expect = 3.9, Method: Composition-based stats. Identities = 14/84 (16%), Positives = 26/84 (30%), Gaps = 1/84 (1%) Query: 14 ALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSF 73 ++ L +N+SN DTVG+ ++ N I G Sbjct: 1 MAQKALDVTGNNLSNRDTVGYTRQRLDVYSSYM-NMNGIYTTKLARLGLSSQGVFASGVS 59 Query: 74 ISTGTELDFALEGDAWFALESPRG 97 + LD ++ + E + Sbjct: 60 QTRDDYLDKRYRDNSCYVSEYNQQ 83 >gi|134297191|ref|YP_001120926.1| flagellar hook-associated protein FlgK [Burkholderia vietnamiensis G4] gi|134140348|gb|ABO56091.1| flagellar hook-associated protein FlgK [Burkholderia vietnamiensis G4] Length = 655 Score = 36.4 bits (82), Expect = 3.9, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 12/37 (32%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N E ++ Q + + +I + + Sbjct: 615 SGVNQNEEAANLMQYQQLYQANAKVIQTAQTLFQTVL 651 Score = 36.0 bits (81), Expect = 4.7, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 21/48 (43%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 N+G++ A L+T N+SN T G+ + ++E G Sbjct: 6 MNLGVSGLNAALWGLTTTGQNISNAATPGYSVERPVYAEESGQYTASG 53 >gi|257091582|ref|YP_003165225.1| hypothetical protein CAP2UW1_4649 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257048591|gb|ACV37778.1| hypothetical protein CAP2UW1_4649 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 119 Score = 36.4 bits (82), Expect = 3.9, Method: Composition-based stats. Identities = 10/54 (18%), Positives = 22/54 (40%), Gaps = 2/54 (3%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 A Q+L +A N++N DT G++ + + +E + + + Sbjct: 3 GVRAYRQQL--LASNIANADTPGYKAVDIDINEAARVVTSTAASLSLATTANGH 54 >gi|301645421|ref|ZP_07245362.1| flagellar hook-associated protein FlgK [Escherichia coli MS 146-1] gi|307136864|ref|ZP_07496220.1| flagellar hook-associated protein FlgK [Escherichia coli H736] gi|331640719|ref|ZP_08341866.1| flagellar hook-associated protein FlgK [Escherichia coli H736] gi|301076305|gb|EFK91111.1| flagellar hook-associated protein FlgK [Escherichia coli MS 146-1] gi|315616821|gb|EFU97438.1| flagellar hook-associated protein FlgK [Escherichia coli 3431] gi|331040093|gb|EGI12301.1| flagellar hook-associated protein FlgK [Escherichia coli H736] Length = 458 Score = 36.4 bits (82), Expect = 4.0, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 22/78 (28%), Gaps = 2/78 (2%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60 M NIG + + L+ A N +N G+ + S + GA + + V Sbjct: 1 MD-MINIGYSGASTAQVELNVTAQNTANAMITGYTRQVAEISTI-GASGGSPNSAGNGVQ 58 Query: 61 SGKEYLSKEVGSFISTGT 78 Sbjct: 59 VDSIRRVSNQYQVNQVWY 76 >gi|226320912|ref|ZP_03796463.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi 29805] gi|226233684|gb|EEH32414.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi 29805] Length = 358 Score = 36.4 bits (82), Expect = 4.0, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 19/46 (41%), Gaps = 3/46 (6%) Query: 1 MQT---SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 M + IG + A + ++TV N+SN G+ +V Sbjct: 1 MDSTFSGIEIGKRSLFAHKDAMNTVGHNLSNATKPGYSRQRVTMKT 46 >gi|83593864|ref|YP_427616.1| hypothetical protein Rru_A2529 [Rhodospirillum rubrum ATCC 11170] gi|83576778|gb|ABC23329.1| Protein of unknown function DUF1078 [Rhodospirillum rubrum ATCC 11170] Length = 452 Score = 36.0 bits (81), Expect = 4.1, Method: Composition-based stats. Identities = 6/36 (16%), Positives = 12/36 (33%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 N E +M+ Q F + +I + + Sbjct: 414 VNVEEETAKMLVFQQSFQMTSQVITTAREMFNTLMS 449 >gi|114330358|ref|YP_746580.1| flagellar basal-body rod protein FlgB [Nitrosomonas eutropha C91] gi|114307372|gb|ABI58615.1| flagellar basal-body rod protein FlgB [Nitrosomonas eutropha C91] Length = 136 Score = 36.0 bits (81), Expect = 4.1, Method: Composition-based stats. Identities = 10/55 (18%), Positives = 24/55 (43%), Gaps = 2/55 (3%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEY 65 A Q L ++ N++N DT F+ FS+ + +++ + + + + Sbjct: 17 GLRAARQEL--LSGNIANADTPSFKAKDFDFSKAMQNVQSPRQVQSALATTSSRH 69 >gi|326386928|ref|ZP_08208542.1| flagellar cell-proximal portion protein [Novosphingobium nitrogenifigens DSM 19370] gi|326208608|gb|EGD59411.1| flagellar cell-proximal portion protein [Novosphingobium nitrogenifigens DSM 19370] Length = 140 Score = 36.0 bits (81), Expect = 4.1, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 25/71 (35%), Gaps = 6/71 (8%) Query: 11 AQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 A A R++T A N++N TV +R +K F+ V+ K+ V Sbjct: 18 AMSAQLVRMNTAASNLANAGTVASNAQGAYRPLKAVFATVLDRSTGLASVKVQGVYQSGA 77 Query: 65 YLSKEVGSFIS 75 + Sbjct: 78 TPVRTHNPDHP 88 Score = 35.2 bits (79), Expect = 8.1, Method: Composition-based stats. Identities = 7/39 (17%), Positives = 19/39 (48%) Query: 201 DSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S + EM +M +++ ++ + ++ ML+ +R Sbjct: 98 SSPVDENAEMVEMTESARQYQNVVEAMQTGKQLMLDTLR 136 >gi|330880535|gb|EGH14684.1| flagellar hook-associated protein FlgK [Pseudomonas syringae pv. glycinea str. race 4] Length = 61 Score = 36.0 bits (81), Expect = 4.2, Method: Composition-based stats. Identities = 6/40 (15%), Positives = 15/40 (37%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 S + E +I Q + + + +I + I ++ Sbjct: 22 SGVSLDEEAANLIKYQQYYTASSQIIKAAQTIFSTLINSL 61 >gi|254691612|ref|ZP_05154866.1| flagellar hook-associated protein FlgK [Brucella abortus bv. 6 str. 870] gi|256256799|ref|ZP_05462335.1| flagellar hook-associated protein FlgK [Brucella abortus bv. 9 str. C68] gi|260757243|ref|ZP_05869591.1| flagellar hook-associated protein FlgK [Brucella abortus bv. 6 str. 870] gi|260883047|ref|ZP_05894661.1| FlgK [Brucella abortus bv. 9 str. C68] gi|297250152|ref|ZP_06933853.1| flagellar hook-associated protein FlgK [Brucella abortus bv. 5 str. B3196] gi|260677351|gb|EEX64172.1| flagellar hook-associated protein FlgK [Brucella abortus bv. 6 str. 870] gi|260872575|gb|EEX79644.1| FlgK [Brucella abortus bv. 9 str. C68] gi|297174021|gb|EFH33385.1| flagellar hook-associated protein FlgK [Brucella abortus bv. 5 str. B3196] Length = 484 Score = 36.0 bits (81), Expect = 4.2, Method: Composition-based stats. Identities = 5/43 (11%), Positives = 17/43 (39%), Gaps = 3/43 (6%) Query: 202 SN---ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 SN + EM ++ L + + + ++ + + + + Sbjct: 442 SNATGVDIDTEMALLLDLEHSYQASSRVLTTVSAMLDDLLNAV 484 >gi|296274028|ref|YP_003656659.1| flagellar basal-body rod protein FlgB [Arcobacter nitrofigilis DSM 7299] gi|296098202|gb|ADG94152.1| flagellar basal-body rod protein FlgB [Arcobacter nitrofigilis DSM 7299] Length = 135 Score = 36.0 bits (81), Expect = 4.2, Method: Composition-based stats. Identities = 7/36 (19%), Positives = 16/36 (44%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 R ++ N++N +T ++T + F + D Sbjct: 20 RQKVISSNIANINTPDYKTKDLSFESQLQEKNRQKD 55 >gi|28900119|ref|NP_799774.1| flagellar basal body rod protein FlgB [Vibrio parahaemolyticus RIMD 2210633] gi|153837054|ref|ZP_01989721.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus AQ3810] gi|260365769|ref|ZP_05778265.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus K5030] gi|260880691|ref|ZP_05893046.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus AN-5034] gi|260897703|ref|ZP_05906199.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus Peru-466] gi|260899386|ref|ZP_05907781.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus AQ4037] gi|1272365|gb|AAA97473.1| LfgB [Vibrio parahaemolyticus] gi|28808402|dbj|BAC61607.1| LfgB [Vibrio parahaemolyticus RIMD 2210633] gi|149749642|gb|EDM60387.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus AQ3810] gi|308086275|gb|EFO35970.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus Peru-466] gi|308091690|gb|EFO41385.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus AN-5034] gi|308109180|gb|EFO46720.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus AQ4037] gi|308115060|gb|EFO52600.1| flagellar basal-body rod protein FlgB [Vibrio parahaemolyticus K5030] gi|328470098|gb|EGF41009.1| flagellar basal body rod protein FlgB [Vibrio parahaemolyticus 10329] Length = 120 Score = 36.0 bits (81), Expect = 4.2, Method: Composition-based stats. Identities = 15/85 (17%), Positives = 30/85 (35%), Gaps = 1/85 (1%) Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76 QR +A N++N DT G+ + F+ V+ + + + S + Sbjct: 21 QRTKVLASNLANVDTPGYLAKDLSFTTVMNQMSTNGVSNSVPKLQVQAQYSVPYQNSK-D 79 Query: 77 GTELDFALEGDAWFALESPRGIILT 101 G ++ +E + LT Sbjct: 80 GNTVELGVEQAKFTQNNMDFQTSLT 104 >gi|134095100|ref|YP_001100175.1| basal-body rod protein [Herminiimonas arsenicoxydans] gi|133739003|emb|CAL62051.1| Flagellar basal-body rod protein FlgB (Putative proximal rod protein) [Herminiimonas arsenicoxydans] Length = 139 Score = 36.0 bits (81), Expect = 4.3, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 30/82 (36%), Gaps = 3/82 (3%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYL 66 L+ A Q+L +A N++N DT F+ + F++ + + A+ + Sbjct: 14 TALS-LRAQRQQL--LASNIANADTPNFKARDIDFNKALQGAIAKSAGGAAAPAALVKTT 70 Query: 67 SKEVGSFISTGTELDFALEGDA 88 + + S L + Sbjct: 71 TAHLSSNTHATIGGAPLLYSNT 92 >gi|224534099|ref|ZP_03674682.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi CA-11.2a] gi|224512798|gb|EEF83166.1| flagellar hook-associated protein FlgK [Borrelia burgdorferi CA-11.2a] Length = 388 Score = 36.0 bits (81), Expect = 4.4, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 19/46 (41%), Gaps = 3/46 (6%) Query: 1 MQT---SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 M + IG + A + ++TV N+SN G+ +V Sbjct: 1 MDSTFSGIEIGKRSLFAHKDAMNTVGHNLSNATKPGYSRQRVTMKT 46 >gi|17988504|ref|NP_541137.1| flagellar hook-associated protein FlgK [Brucella melitensis bv. 1 str. 16M] gi|225686884|ref|YP_002734856.1| flagellar hook-associated protein FlgK [Brucella melitensis ATCC 23457] gi|256042865|ref|ZP_05445811.1| flagellar hook-associated protein FlgK [Brucella melitensis bv. 1 str. Rev.1] gi|256261979|ref|ZP_05464511.1| flagellar hook-associated protein [Brucella melitensis bv. 2 str. 63/9] gi|260564102|ref|ZP_05834587.1| flagellar hook-associated protein [Brucella melitensis bv. 1 str. 16M] gi|265989300|ref|ZP_06101857.1| FlgK [Brucella melitensis bv. 1 str. Rev.1] gi|17984296|gb|AAL53401.1| flagellar hook-associated protein 1 [Brucella melitensis bv. 1 str. 16M] gi|225642989|gb|ACO02902.1| flagellar hook-associated protein FlgK [Brucella melitensis ATCC 23457] gi|260151745|gb|EEW86838.1| flagellar hook-associated protein [Brucella melitensis bv. 1 str. 16M] gi|262999969|gb|EEZ12659.1| FlgK [Brucella melitensis bv. 1 str. Rev.1] gi|263091463|gb|EEZ15999.1| flagellar hook-associated protein [Brucella melitensis bv. 2 str. 63/9] gi|326411302|gb|ADZ68366.1| flagellar hook-associated protein FlgK [Brucella melitensis M28] gi|326554591|gb|ADZ89230.1| flagellar hook-associated protein FlgK [Brucella melitensis M5-90] Length = 484 Score = 36.0 bits (81), Expect = 4.4, Method: Composition-based stats. Identities = 5/43 (11%), Positives = 17/43 (39%), Gaps = 3/43 (6%) Query: 202 SN---ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 SN + EM ++ L + + + ++ + + + + Sbjct: 442 SNATGVDIDTEMALLLDLEHSYQASSRVLTTVSAMLDDLLNAV 484 >gi|325524325|gb|EGD02427.1| flagellar hook-associated protein FlgK [Burkholderia sp. TJI49] Length = 599 Score = 36.0 bits (81), Expect = 4.4, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 11/37 (29%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 S N E ++ Q + + +I + Sbjct: 559 SGVNQNEEAANLMQYQQLYQANAKVIQTAATLFQTVL 595 >gi|256370953|ref|YP_003108777.1| protein of unknown function DUF1078 domain protein [Acidimicrobium ferrooxidans DSM 10331] gi|256007537|gb|ACU53104.1| protein of unknown function DUF1078 domain protein [Acidimicrobium ferrooxidans DSM 10331] Length = 144 Score = 36.0 bits (81), Expect = 4.4, Method: Composition-based stats. Identities = 5/27 (18%), Positives = 13/27 (48%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTD 30 + ++ + L T+A N++N + Sbjct: 6 AIDVAATGVTTEQTWLDTIASNVANVN 32 >gi|254695092|ref|ZP_05156920.1| flagellar hook-associated protein FlgK [Brucella abortus bv. 3 str. Tulya] gi|261215443|ref|ZP_05929724.1| flagellar hook-associated protein FlgK [Brucella abortus bv. 3 str. Tulya] gi|260917050|gb|EEX83911.1| flagellar hook-associated protein FlgK [Brucella abortus bv. 3 str. Tulya] Length = 484 Score = 36.0 bits (81), Expect = 4.5, Method: Composition-based stats. Identities = 5/43 (11%), Positives = 17/43 (39%), Gaps = 3/43 (6%) Query: 202 SN---ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 SN + EM ++ L + + + ++ + + + + Sbjct: 442 SNATGVDIDTEMALLLDLEHSYQASSRVLTTVSAMLDDLLNAV 484 >gi|163845456|ref|YP_001623111.1| flagellar hook-associated protein FlgK [Brucella suis ATCC 23445] gi|163676179|gb|ABY40289.1| flagellar hook-associated protein FlgK [Brucella suis ATCC 23445] Length = 484 Score = 36.0 bits (81), Expect = 4.5, Method: Composition-based stats. Identities = 5/43 (11%), Positives = 17/43 (39%), Gaps = 3/43 (6%) Query: 202 SN---ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 SN + EM ++ L + + + ++ + + + + Sbjct: 442 SNATGVDIDTEMALLLDLEHSYQASSRVLTTVSAMLDDLLNAV 484 >gi|2689167|emb|CAA06002.1| hook associated flagellar protein 1 [Borrelia burgdorferi] Length = 253 Score = 36.0 bits (81), Expect = 4.5, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 19/46 (41%), Gaps = 3/46 (6%) Query: 1 MQT---SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 M + IG + A + ++TV N+SN G+ +V Sbjct: 1 MDSTFSGIEIGKRSLFAHKDAMNTVGHNLSNATKPGYSRQRVTMKT 46 >gi|325291942|ref|YP_004277806.1| flagellar basal body rod protein FlgB [Agrobacterium sp. H13-3] gi|325059795|gb|ADY63486.1| flagellar basal body rod protein FlgB [Agrobacterium sp. H13-3] Length = 130 Score = 36.0 bits (81), Expect = 4.5, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 17/40 (42%), Gaps = 1/40 (2%) Query: 15 LEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIKNDID 53 L R VA N++N +T F V F V+ A + Sbjct: 17 LSVRQEVVATNIANANTPKFHAKDVSPFEAVMQATSQQVG 56 >gi|294679036|ref|YP_003579651.1| flagellar basal-body rod protein; FlgB [Rhodobacter capsulatus SB 1003] gi|294477856|gb|ADE87244.1| flagellar basal-body rod protein; FlgB [Rhodobacter capsulatus SB 1003] Length = 128 Score = 36.0 bits (81), Expect = 4.5, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 21/53 (39%), Gaps = 3/53 (5%) Query: 9 LAAQLALEQRLS--TVADNMSNTDTVGFR-TIKVKFSEVVGAIKNDIDQKISF 58 ++ +A L VA N++N DT G+R V F++ + Sbjct: 10 MSQAMARHAALREGVVATNVANADTPGYRAKDVVSFADSYRTEHAQPMRATRP 62 >gi|312887246|ref|ZP_07746850.1| TonB-dependent receptor [Mucilaginibacter paludis DSM 18603] gi|311300558|gb|EFQ77623.1| TonB-dependent receptor [Mucilaginibacter paludis DSM 18603] Length = 1153 Score = 36.0 bits (81), Expect = 4.6, Method: Composition-based stats. Identities = 25/191 (13%), Positives = 59/191 (30%), Gaps = 6/191 (3%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTI--KVKFSEVVGAIKNDIDQKISFVASGKEYLSK 68 QL+ ++ +T+A+N+ T+ ++ F+ ++GA + + + K Sbjct: 616 GQLSSSRKTTTIANNLLYQGTINYKKDFGNNSFTALLGATQETNKDETTDQGQTGFPNDK 675 Query: 69 EVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMAS 128 ++ GT ++ ++ +A R S + + Sbjct: 676 TYIFDVTRGTTTNY----NSIYATNKAIISYFGRVQYSYKNKYLFSASLRTDGSSIFGPN 731 Query: 129 VPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLED 188 + V + + +K + T L + G R S N+ Sbjct: 732 NRWGLFPSVSAGWVLSEEDFLKKIDWMGTTKLRASWGRAGNDRIVASSYVSNMVALNYPT 791 Query: 189 LSGVTVKRGFL 199 + GF+ Sbjct: 792 GDAQAITNGFV 802 >gi|148252489|ref|YP_001237074.1| putative flagellar basal-body rod protein (flgC) [Bradyrhizobium sp. BTAi1] gi|146404662|gb|ABQ33168.1| putative flagellar basal-body rod protein (flgC) [Bradyrhizobium sp. BTAi1] Length = 125 Score = 36.0 bits (81), Expect = 4.6, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 14/37 (37%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 G + N + EM + F + ++ +++ Sbjct: 80 GLVAAPNVDLAQEMISQLVAKYSFAANARVLKASDEM 116 >gi|23500853|ref|NP_700293.1| flagellar hook-associated protein FlgK [Brucella suis 1330] gi|161621181|ref|YP_001595067.1| flagellar hook-associated protein FlgK [Brucella canis ATCC 23365] gi|254699261|ref|ZP_05161089.1| flagellar hook-associated protein FlgK [Brucella suis bv. 5 str. 513] gi|254702382|ref|ZP_05164210.1| flagellar hook-associated protein FlgK [Brucella suis bv. 3 str. 686] gi|254711817|ref|ZP_05173628.1| flagellar hook-associated protein FlgK [Brucella ceti M644/93/1] gi|254714886|ref|ZP_05176697.1| flagellar hook-associated protein FlgK [Brucella ceti M13/05/1] gi|256015897|ref|YP_003105906.1| flagellar hook-associated protein [Brucella microti CCM 4915] gi|256059805|ref|ZP_05450000.1| flagellar hook-associated protein FlgK [Brucella neotomae 5K33] gi|260568715|ref|ZP_05839184.1| flagellar hook-associated protein [Brucella suis bv. 4 str. 40] gi|261216576|ref|ZP_05930857.1| flagellar hook-associated protein FlgK [Brucella ceti M13/05/1] gi|261319446|ref|ZP_05958643.1| flagellar hook-associated protein FlgK [Brucella ceti M644/93/1] gi|261323785|ref|ZP_05962982.1| FlgK [Brucella neotomae 5K33] gi|261749701|ref|ZP_05993410.1| flagellar hook-associated protein [Brucella suis bv. 5 str. 513] gi|261752945|ref|ZP_05996654.1| flagellar hook-associated protein [Brucella suis bv. 3 str. 686] gi|294852967|ref|ZP_06793639.1| flagellar hook-associated protein FlgK [Brucella sp. NVSL 07-0026] gi|23464517|gb|AAN34298.1| flagellar hook-associated protein FlgK, putative [Brucella suis 1330] gi|161337992|gb|ABX64296.1| flagellar hook-associated protein FlgK [Brucella canis ATCC 23365] gi|255998557|gb|ACU50244.1| flagellar hook-associated protein [Brucella microti CCM 4915] gi|260155380|gb|EEW90461.1| flagellar hook-associated protein [Brucella suis bv. 4 str. 40] gi|260921665|gb|EEX88233.1| flagellar hook-associated protein FlgK [Brucella ceti M13/05/1] gi|261292136|gb|EEX95632.1| flagellar hook-associated protein FlgK [Brucella ceti M644/93/1] gi|261299765|gb|EEY03262.1| FlgK [Brucella neotomae 5K33] gi|261739454|gb|EEY27380.1| flagellar hook-associated protein [Brucella suis bv. 5 str. 513] gi|261742698|gb|EEY30624.1| flagellar hook-associated protein [Brucella suis bv. 3 str. 686] gi|294818622|gb|EFG35622.1| flagellar hook-associated protein FlgK [Brucella sp. NVSL 07-0026] Length = 484 Score = 36.0 bits (81), Expect = 4.6, Method: Composition-based stats. Identities = 5/43 (11%), Positives = 17/43 (39%), Gaps = 3/43 (6%) Query: 202 SN---ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 SN + EM ++ L + + + ++ + + + + Sbjct: 442 SNATGVDIDTEMALLLDLEHSYQASSRVLTTVSAMLDDLLNAV 484 >gi|319403958|emb|CBI77546.1| Flagellar basal-body rod protein flgB [Bartonella rochalimae ATCC BAA-1498] Length = 128 Score = 36.0 bits (81), Expect = 4.6, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 19/34 (55%), Gaps = 1/34 (2%) Query: 15 LEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGA 47 L R +A N++N +T G++ V+ F+ V+ Sbjct: 17 LSVRQKAIASNVANANTPGYKARDVEDFTAVLQN 50 >gi|319405398|emb|CBI79017.1| Flagellar basal-body rod protein flgB [Bartonella sp. AR 15-3] Length = 128 Score = 36.0 bits (81), Expect = 4.7, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 15/26 (57%) Query: 15 LEQRLSTVADNMSNTDTVGFRTIKVK 40 L R +A N++N +T G++ V+ Sbjct: 17 LSVRQKAIASNVANANTPGYKARDVE 42 >gi|306841277|ref|ZP_07473988.1| flagellar hook-associated protein FlgK [Brucella sp. BO2] gi|306288679|gb|EFM60010.1| flagellar hook-associated protein FlgK [Brucella sp. BO2] Length = 484 Score = 36.0 bits (81), Expect = 4.7, Method: Composition-based stats. Identities = 5/43 (11%), Positives = 17/43 (39%), Gaps = 3/43 (6%) Query: 202 SN---ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 SN + EM ++ L + + + ++ + + + + Sbjct: 442 SNATGVDIDTEMALLLDLEHSYQASSRVLTTVSAMLDDLLNAV 484 >gi|89069823|ref|ZP_01157158.1| flagellar basal-body rod protein; FlgB [Oceanicola granulosus HTCC2516] gi|89044624|gb|EAR50740.1| flagellar basal-body rod protein; FlgB [Oceanicola granulosus HTCC2516] Length = 122 Score = 36.0 bits (81), Expect = 4.7, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 17/44 (38%), Gaps = 1/44 (2%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRT-IKVKFSEVVGA 47 A R VA N++N DT G+R F EV G Sbjct: 8 MQTSAAMARHASARQVLVARNIANADTPGYRAQSLPPFREVAGT 51 >gi|306845418|ref|ZP_07477992.1| flagellar hook-associated protein FlgK [Brucella sp. BO1] gi|306274161|gb|EFM55977.1| flagellar hook-associated protein FlgK [Brucella sp. BO1] Length = 484 Score = 36.0 bits (81), Expect = 4.7, Method: Composition-based stats. Identities = 5/43 (11%), Positives = 17/43 (39%), Gaps = 3/43 (6%) Query: 202 SN---ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 SN + EM ++ L + + + ++ + + + + Sbjct: 442 SNATGVDIDTEMALLLDLEHSYQASSRVLTTVSAMLDDLLNAV 484 >gi|254458790|ref|ZP_05072214.1| flagellar basal-body rod protein FlgB [Campylobacterales bacterium GD 1] gi|207084556|gb|EDZ61844.1| flagellar basal-body rod protein FlgB [Campylobacterales bacterium GD 1] Length = 143 Score = 36.0 bits (81), Expect = 4.8, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 30/84 (35%) Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76 R ++ N++N DT +R + F++ + A K DI + S + + + Sbjct: 21 MRQDMISSNIANADTPFYRPRDISFADALAAKKADILNEGSDKLALAQTNGAHIPLHNEK 80 Query: 77 GTELDFALEGDAWFALESPRGIIL 100 G D A + L Sbjct: 81 GNYKPTTFYRDGHMARNDGNSVDL 104 >gi|119715008|ref|YP_921973.1| flagellar basal-body rod protein [Nocardioides sp. JS614] gi|119535669|gb|ABL80286.1| flagellar basal-body rod protein [Nocardioides sp. JS614] Length = 130 Score = 36.0 bits (81), Expect = 4.8, Method: Composition-based stats. Identities = 8/28 (28%), Positives = 15/28 (53%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTV 32 I ++ + L T+A N++N +TV Sbjct: 7 LTIAGSSMGVHQTWLDTLASNIANVNTV 34 Score = 35.2 bits (79), Expect = 8.1, Method: Composition-based stats. Identities = 10/73 (13%), Positives = 30/73 (41%), Gaps = 6/73 (8%) Query: 167 QGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTL 226 G + + G + P P+ D G++ + + +M Q++ + F + + Sbjct: 60 AGLAQSDPQGRLVSDPGNPMADAD------GYVRAPDMDMSTQMTQLVMAQRGFQASVQV 113 Query: 227 IDENEKSMLEAIR 239 + +++ A++ Sbjct: 114 TKQAQETYTAALQ 126 >gi|77457733|ref|YP_347238.1| flagellar hook-associated protein FlgK [Pseudomonas fluorescens Pf0-1] gi|77381736|gb|ABA73249.1| putative flagellar hook-associated protein [Pseudomonas fluorescens Pf0-1] Length = 681 Score = 36.0 bits (81), Expect = 4.8, Method: Composition-based stats. Identities = 10/39 (25%), Positives = 19/39 (48%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVK 40 + NIG++ A L+ +N++N DT G+ + Sbjct: 1 MSLLNIGMSGLAASSSSLAVTGNNIANVDTAGYSRQQTV 39 >gi|315180489|gb|ADT87403.1| flagellar basal body rod protein [Vibrio furnissii NCTC 11218] Length = 104 Score = 36.0 bits (81), Expect = 4.9, Method: Composition-based stats. Identities = 14/96 (14%), Positives = 32/96 (33%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTG 77 R S +A N++N DT ++ V F+ V+ + + S + + Sbjct: 9 RTSVLASNIANADTPNYKAKDVSFNVVMTGLMKETSAIGIQTESLYRIPVQRSRDGNTVE 68 Query: 78 TELDFALEGDAWFALESPRGIILTRDGRFKVTDDGS 113 + + A + + ++ K +G Sbjct: 69 LQSEQARFAQNNMEYQQSLQFLKSKISGLKRAIEGQ 104 >gi|254487293|ref|ZP_05100498.1| flagellar basal-body rod protein; FlgB [Roseobacter sp. GAI101] gi|214044162|gb|EEB84800.1| flagellar basal-body rod protein; FlgB [Roseobacter sp. GAI101] Length = 115 Score = 36.0 bits (81), Expect = 4.9, Method: Composition-based stats. Identities = 8/37 (21%), Positives = 18/37 (48%), Gaps = 1/37 (2%) Query: 17 QRLSTVADNMSNTDTVGF-RTIKVKFSEVVGAIKNDI 52 QR + + N++N+DT G+ F + + ++ Sbjct: 7 QRQAIASQNVANSDTPGYVAKDIAAFETLYQSSRDGT 43 >gi|86149083|ref|ZP_01067315.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni subsp. jejuni CF93-6] gi|88596882|ref|ZP_01100118.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni subsp. jejuni 84-25] gi|218562180|ref|YP_002343959.1| flagellar basal body rod protein FlgB [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|85840441|gb|EAQ57698.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni subsp. jejuni CF93-6] gi|88190571|gb|EAQ94544.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni subsp. jejuni 84-25] gi|112359886|emb|CAL34674.1| flagellar basal-body rod protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|315927026|gb|EFV06381.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315928560|gb|EFV07857.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni subsp. jejuni 305] Length = 143 Score = 36.0 bits (81), Expect = 4.9, Method: Composition-based stats. Identities = 10/45 (22%), Positives = 20/45 (44%), Gaps = 1/45 (2%) Query: 9 LAAQLALEQ-RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 + LA R + N++N DT ++ ++F + N+I Sbjct: 11 VTGALAGRNLRNQLINANLANVDTPFYKARDIEFETALVNRANEI 55 >gi|149203130|ref|ZP_01880101.1| flagellar basal-body rod protein; FlgB [Roseovarius sp. TM1035] gi|149143676|gb|EDM31712.1| flagellar basal-body rod protein; FlgB [Roseovarius sp. TM1035] Length = 129 Score = 36.0 bits (81), Expect = 4.9, Method: Composition-based stats. Identities = 12/70 (17%), Positives = 24/70 (34%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTG 77 R + V+ NM+N DT G+ + VV A + + + ++ Sbjct: 21 RQALVSQNMANADTPGYAARDIADFAVVYASDDGGQMPRATRGGHMLGHETRLDFAVAKD 80 Query: 78 TELDFALEGD 87 + G+ Sbjct: 81 RDAVADPNGN 90 >gi|89072318|ref|ZP_01158897.1| LfgB [Photobacterium sp. SKA34] gi|89051850|gb|EAR57302.1| LfgB [Photobacterium sp. SKA34] Length = 120 Score = 36.0 bits (81), Expect = 4.9, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 31/85 (36%), Gaps = 1/85 (1%) Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIST 76 QR +A N++N DT G+ ++F + I QK + + + Sbjct: 21 QRAKVLASNLANVDTPGYLAKDIRFDAIASQIGVGKVQKAPTQLVVSDGYAVPYQNSK-D 79 Query: 77 GTELDFALEGDAWFALESPRGIILT 101 G ++ ++E + LT Sbjct: 80 GNTVELSVEQAKFTKNNMDFQSSLT 104 >gi|296282281|ref|ZP_06860279.1| flagellar basal-body rod protein FlgC [Citromicrobium bathyomarinum JL354] Length = 130 Score = 36.0 bits (81), Expect = 5.0, Method: Composition-based stats. Identities = 7/36 (19%), Positives = 21/36 (58%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + EM +M+ +++++++ + ++ MLE +R Sbjct: 93 VDENAEMIEMLEASRQYSNMVEAMSTAKQLMLETMR 128 >gi|146278634|ref|YP_001168793.1| flagellar basal body rod protein FlgB [Rhodobacter sphaeroides ATCC 17025] gi|145556875|gb|ABP71488.1| Flagellar basal body protein-like protein [Rhodobacter sphaeroides ATCC 17025] Length = 127 Score = 36.0 bits (81), Expect = 5.0, Method: Composition-based stats. Identities = 9/28 (32%), Positives = 14/28 (50%), Gaps = 1/28 (3%) Query: 18 RLSTVADNMSNTDTVGFR-TIKVKFSEV 44 R +A N++N+DT G+R F Sbjct: 21 RTDVIARNVANSDTPGYRARDLPDFESY 48 >gi|20086976|gb|AAM10736.1| flagella-associated protein K [Leptospira interrogans serovar lai] Length = 543 Score = 36.0 bits (81), Expect = 5.0, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 29/89 (32%), Gaps = 9/89 (10%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEV---------VGAIKNDID 53 + IG A +Q L T N+SN D + +V + + + I Sbjct: 6 SGLEIGKRGLTAHQQALQTTGHNISNADNKHYARQRVTMTAMDPLYDPSLNRANLPGQIG 65 Query: 54 QKISFVASGKEYLSKEVGSFISTGTELDF 82 Q + + + + I T D+ Sbjct: 66 QGVEIASIERIRDNFIDDRIIETSGNKDY 94 >gi|283955950|ref|ZP_06373440.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni subsp. jejuni 1336] gi|283792610|gb|EFC31389.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni subsp. jejuni 1336] Length = 143 Score = 36.0 bits (81), Expect = 5.1, Method: Composition-based stats. Identities = 10/45 (22%), Positives = 20/45 (44%), Gaps = 1/45 (2%) Query: 9 LAAQLALEQ-RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 + LA R + N++N DT ++ ++F + N+I Sbjct: 11 VTGALAGRNLRNQLINANLANVDTPFYKARDIEFETALVNRANEI 55 >gi|86151611|ref|ZP_01069825.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni subsp. jejuni 260.94] gi|86153541|ref|ZP_01071745.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni subsp. jejuni HB93-13] gi|121613256|ref|YP_001000228.1| flagellar basal body rod protein FlgB [Campylobacter jejuni subsp. jejuni 81-176] gi|157414809|ref|YP_001482065.1| flagellar basal body rod protein FlgB [Campylobacter jejuni subsp. jejuni 81116] gi|167005183|ref|ZP_02270941.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni subsp. jejuni 81-176] gi|315124051|ref|YP_004066055.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85841240|gb|EAQ58488.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni subsp. jejuni 260.94] gi|85843267|gb|EAQ60478.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni subsp. jejuni HB93-13] gi|87250467|gb|EAQ73425.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni subsp. jejuni 81-176] gi|157385773|gb|ABV52088.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni subsp. jejuni 81116] gi|307747447|gb|ADN90717.1| Flagellar basal-body rod protein FlgB [Campylobacter jejuni subsp. jejuni M1] gi|315017773|gb|ADT65866.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315931722|gb|EFV10677.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni subsp. jejuni 327] Length = 143 Score = 36.0 bits (81), Expect = 5.1, Method: Composition-based stats. Identities = 10/45 (22%), Positives = 20/45 (44%), Gaps = 1/45 (2%) Query: 9 LAAQLALEQ-RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 + LA R + N++N DT ++ ++F + N+I Sbjct: 11 VTGALAGRNLRNQLINANLANVDTPFYKARDIEFETALVNRANEI 55 >gi|312115279|ref|YP_004012875.1| flagellar hook-associated protein FlgK [Rhodomicrobium vannielii ATCC 17100] gi|311220408|gb|ADP71776.1| flagellar hook-associated protein FlgK [Rhodomicrobium vannielii ATCC 17100] Length = 489 Score = 36.0 bits (81), Expect = 5.1, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 19/43 (44%), Gaps = 3/43 (6%) Query: 202 SN---ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 SN N E+ +M+ L Q + + L+ ++ + + I Sbjct: 447 SNATGVNLDSELSKMLALEQSYAASAKLVSAVDQMFSDLLNAI 489 >gi|242309756|ref|ZP_04808911.1| flagellar basal-body rod protein flgb proximal rod protein [Helicobacter pullorum MIT 98-5489] gi|239523757|gb|EEQ63623.1| flagellar basal-body rod protein flgb proximal rod protein [Helicobacter pullorum MIT 98-5489] Length = 144 Score = 36.0 bits (81), Expect = 5.1, Method: Composition-based stats. Identities = 6/37 (16%), Positives = 18/37 (48%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 R ++ N++N T +R + F +++ +++ Sbjct: 21 SLRRDMISSNIANVSTPMYRPKDINFEQMMAKKADEV 57 >gi|39933177|ref|NP_945453.1| putative flagellar basal-body rod protein flgC [Rhodopseudomonas palustris CGA009] gi|192288534|ref|YP_001989139.1| hypothetical protein Rpal_0101 [Rhodopseudomonas palustris TIE-1] gi|39652802|emb|CAE25541.1| putative flagellar basal-body rod protein flgC [Rhodopseudomonas palustris CGA009] gi|192282283|gb|ACE98663.1| protein of unknown function DUF1078 domain protein [Rhodopseudomonas palustris TIE-1] Length = 136 Score = 36.0 bits (81), Expect = 5.1, Method: Composition-based stats. Identities = 9/33 (27%), Positives = 16/33 (48%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG 33 M +I ++ A +RL A N++N + G Sbjct: 1 MSAIASIAVSGLNAATRRLEVSASNIANQRSTG 33 >gi|319898634|ref|YP_004158727.1| flagellar basal-body rod protein flgB [Bartonella clarridgeiae 73] gi|319402598|emb|CBI76143.1| Flagellar basal-body rod protein flgB [Bartonella clarridgeiae 73] Length = 128 Score = 36.0 bits (81), Expect = 5.3, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 18/34 (52%), Gaps = 1/34 (2%) Query: 15 LEQRLSTVADNMSNTDTVGFRTIKV-KFSEVVGA 47 L R +A N++N +T G++ V F+ V+ Sbjct: 17 LSVRQKAIASNVANANTPGYKARDVDDFTAVLQN 50 >gi|114706627|ref|ZP_01439528.1| flagellar hook-associated protein K [Fulvimarina pelagi HTCC2506] gi|114538019|gb|EAU41142.1| flagellar hook-associated protein K [Fulvimarina pelagi HTCC2506] Length = 469 Score = 36.0 bits (81), Expect = 5.3, Method: Composition-based stats. Identities = 8/40 (20%), Positives = 17/40 (42%), Gaps = 3/40 (7%) Query: 202 SN---ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 SN N EM ++ L + + + T L+ + + + Sbjct: 427 SNKTGINLDDEMSHLLELERTYQASTKLVQTVGELLDRLL 466 >gi|283954184|ref|ZP_06371709.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni subsp. jejuni 414] gi|283794463|gb|EFC33207.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni subsp. jejuni 414] Length = 143 Score = 35.6 bits (80), Expect = 5.3, Method: Composition-based stats. Identities = 10/45 (22%), Positives = 20/45 (44%), Gaps = 1/45 (2%) Query: 9 LAAQLALEQ-RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 + LA R + N++N DT ++ ++F + N+I Sbjct: 11 VTGALAGRNLRNQLINANLANVDTPFYKARDIEFETALVNRANEI 55 >gi|91975157|ref|YP_567816.1| putative flagellar basal-body rod protein flgC [Rhodopseudomonas palustris BisB5] gi|91681613|gb|ABE37915.1| putative flagellar basal-body rod protein flgC [Rhodopseudomonas palustris BisB5] Length = 136 Score = 35.6 bits (80), Expect = 5.3, Method: Composition-based stats. Identities = 9/33 (27%), Positives = 17/33 (51%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG 33 M + +I ++ A +RL A N++N + G Sbjct: 1 MTSIASIAVSGMNAATRRLEVSASNVANQQSTG 33 >gi|260466622|ref|ZP_05812810.1| flagellar basal body rod protein [Mesorhizobium opportunistum WSM2075] gi|259029628|gb|EEW30916.1| flagellar basal body rod protein [Mesorhizobium opportunistum WSM2075] Length = 126 Score = 35.6 bits (80), Expect = 5.4, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 20/42 (47%), Gaps = 1/42 (2%) Query: 18 RLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIKNDIDQKISF 58 R S +A N++N +T G+ V+ F +V+ + + Sbjct: 20 RQSAIAGNIANANTPGYTANDVEPFEKVLDRAAVSLQATQAG 61 >gi|254720774|ref|ZP_05182585.1| flagellar hook-associated protein FlgK [Brucella sp. 83/13] gi|265985832|ref|ZP_06098567.1| flagellar hook-associated protein FlgK [Brucella sp. 83/13] gi|306840135|ref|ZP_07472920.1| flagellar hook-associated protein FlgK [Brucella sp. NF 2653] gi|264664424|gb|EEZ34685.1| flagellar hook-associated protein FlgK [Brucella sp. 83/13] gi|306404780|gb|EFM61074.1| flagellar hook-associated protein FlgK [Brucella sp. NF 2653] Length = 484 Score = 35.6 bits (80), Expect = 5.5, Method: Composition-based stats. Identities = 5/43 (11%), Positives = 17/43 (39%), Gaps = 3/43 (6%) Query: 202 SN---ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 SN + EM ++ L + + + ++ + + + + Sbjct: 442 SNATGVDIDTEMALLLDLEHSYQASSRVLTTVSAMLDDLLNAV 484 >gi|307945655|ref|ZP_07660991.1| flagellar basal-body rod protein FlgB [Roseibium sp. TrichSKD4] gi|307771528|gb|EFO30753.1| flagellar basal-body rod protein FlgB [Roseibium sp. TrichSKD4] Length = 138 Score = 35.6 bits (80), Expect = 5.5, Method: Composition-based stats. Identities = 15/94 (15%), Positives = 34/94 (36%), Gaps = 4/94 (4%) Query: 5 FNIGL-AAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDIDQKISFVA 60 L + + R +++N++N DT + +V F++ VG ++ + ++ V Sbjct: 12 LFQALKSKMQWHQVRQGVLSENVANADTPRYSAREVTAFSFADHVGLAQSGLSTSVTKVG 71 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALES 94 + V S + G+ E Sbjct: 72 HISGSAAPGVASKAEERDMFEVTPSGNNVVLEEQ 105 >gi|295688393|ref|YP_003592086.1| hypothetical protein Cseg_0963 [Caulobacter segnis ATCC 21756] gi|295430296|gb|ADG09468.1| protein of unknown function DUF1078 domain protein [Caulobacter segnis ATCC 21756] Length = 79 Score = 35.6 bits (80), Expect = 5.6, Method: Composition-based stats. Identities = 3/36 (8%), Positives = 11/36 (30%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 + E + I F + ++ ++ + Sbjct: 41 VDYGKERVEQISAQYDFRANAKVVQTADQMTGALLN 76 >gi|332297606|ref|YP_004439528.1| flagellar basal-body rod protein FlgB [Treponema brennaborense DSM 12168] gi|332180709|gb|AEE16397.1| flagellar basal-body rod protein FlgB [Treponema brennaborense DSM 12168] Length = 138 Score = 35.6 bits (80), Expect = 5.7, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 16/41 (39%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKND 51 A A R A+N++N++ F+ V F + Sbjct: 14 AMDASTLRYQVSANNLANSEVPNFKRTSVNFESQLKRALES 54 >gi|254510289|ref|ZP_05122356.1| flagellar basal-body rod protein; FlgB [Rhodobacteraceae bacterium KLH11] gi|221534000|gb|EEE36988.1| flagellar basal-body rod protein; FlgB [Rhodobacteraceae bacterium KLH11] Length = 115 Score = 35.6 bits (80), Expect = 5.7, Method: Composition-based stats. Identities = 10/37 (27%), Positives = 16/37 (43%), Gaps = 1/37 (2%) Query: 17 QRLSTVADNMSNTDTVGFR-TIKVKFSEVVGAIKNDI 52 QR + ++ NM+N DT G++ F V Sbjct: 7 QRQAVISRNMANADTPGYQPKDITPFQNVFENSAAGG 43 >gi|319406973|emb|CBI80610.1| Flagellar basal-body rod protein flgB [Bartonella sp. 1-1C] Length = 128 Score = 35.6 bits (80), Expect = 5.7, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 19/34 (55%), Gaps = 1/34 (2%) Query: 15 LEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGA 47 L R +A N++N +T G++ V+ F+ V+ Sbjct: 17 LSVRQKAIASNVANANTPGYKARDVEDFTAVLQN 50 >gi|239834445|ref|ZP_04682773.1| flagellar basal-body rod protein FlgB [Ochrobactrum intermedium LMG 3301] gi|239822508|gb|EEQ94077.1| flagellar basal-body rod protein FlgB [Ochrobactrum intermedium LMG 3301] Length = 126 Score = 35.6 bits (80), Expect = 5.8, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%) Query: 15 LEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIK 49 L R +TVA N++N +T FR V+ F++V+ + Sbjct: 17 LSVRQATVAGNVANANTPDFRARDVQPFADVLDKTQ 52 >gi|1086558|gb|AAB68965.1| FlgB [Agrobacterium tumefaciens] Length = 134 Score = 35.6 bits (80), Expect = 5.8, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 17/40 (42%), Gaps = 1/40 (2%) Query: 15 LEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIKNDID 53 L R VA N++N +T F V F V+ A + Sbjct: 21 LSVRQEVVATNIANANTPKFHAKDVSPFEAVMQATSQQVG 60 >gi|259417223|ref|ZP_05741142.1| flagellar hook-associated protein FlgK [Silicibacter sp. TrichCH4B] gi|259346129|gb|EEW57943.1| flagellar hook-associated protein FlgK [Silicibacter sp. TrichCH4B] Length = 482 Score = 35.6 bits (80), Expect = 5.8, Method: Composition-based stats. Identities = 6/102 (5%), Positives = 31/102 (30%), Gaps = 1/102 (0%) Query: 138 EIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRG 197 + + + + + + ++ + + ++ Sbjct: 381 NNYAEAMEATNTITSPGLGSGDYSAYAIAANLMTNFTQENTWAEQELAYSSAIYSDIQSR 440 Query: 198 FLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 LE ++ E+ ++ + + + ++ ++ M E +R Sbjct: 441 ELEQG-VDTDAELQTLMMIETVYGANARMLQAIDEMMQELMR 481 Score = 35.6 bits (80), Expect = 6.6, Method: Composition-based stats. Identities = 8/31 (25%), Positives = 16/31 (51%) Query: 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGF 34 + + + A + S V+DN++N T G+ Sbjct: 6 ALSSAMTGITAAGRSTSVVSDNLANALTEGY 36 >gi|167576659|ref|ZP_02369533.1| flagellar basal-body rod protein FlgB [Burkholderia thailandensis TXDOH] Length = 109 Score = 35.6 bits (80), Expect = 5.8, Method: Composition-based stats. Identities = 8/47 (17%), Positives = 16/47 (34%) Query: 12 QLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISF 58 +R +A N++N DT G++ + F + Sbjct: 1 MKLRAERTKIIASNLANLDTPGYQAQDLDFKRSLAEAAGGGAGARLG 47 >gi|167567747|ref|ZP_02360663.1| flagellar basal-body rod protein FlgB [Burkholderia oklahomensis EO147] gi|167574698|ref|ZP_02367572.1| flagellar basal-body rod protein FlgB [Burkholderia oklahomensis C6786] Length = 117 Score = 35.6 bits (80), Expect = 5.9, Method: Composition-based stats. Identities = 15/104 (14%), Positives = 32/104 (30%), Gaps = 7/104 (6%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS---EVVGAIKNDIDQKIS 57 M + A ++ +A N++N DT G++ + F D + Sbjct: 1 MD--LHPAALKLRAERTKM--LASNLANLDTPGYQARDLDFKASMAAAAGSGRRGDAFGA 56 Query: 58 FVASGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101 + + G ++ +E A+ + LT Sbjct: 57 ALDGEATLGYRVPYQPAQDGNTVELGVEQAAFAQNAADFQTSLT 100 >gi|254255084|ref|ZP_04948401.1| Flagellar basal body protein [Burkholderia dolosa AUO158] gi|124899729|gb|EAY71572.1| Flagellar basal body protein [Burkholderia dolosa AUO158] Length = 160 Score = 35.6 bits (80), Expect = 5.9, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 35/100 (35%), Gaps = 1/100 (1%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 + + AA +R +A N++N T GF+ + F + + D D + Sbjct: 45 ERDMGVHAAALKVRTERTRILASNLANGATPGFQARDIDFRASLERMLTD-DAFAAAAHG 103 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILT 101 G + G ++ +E A+ + LT Sbjct: 104 GDAPKYRVPSRPSVDGNTVELGVEQAAFAQNAADFQASLT 143 >gi|86747251|ref|YP_483747.1| putative flagellar basal-body rod protein flgC [Rhodopseudomonas palustris HaA2] gi|86570279|gb|ABD04836.1| putative flagellar basal-body rod protein flgC [Rhodopseudomonas palustris HaA2] Length = 136 Score = 35.6 bits (80), Expect = 5.9, Method: Composition-based stats. Identities = 9/33 (27%), Positives = 16/33 (48%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG 33 M + I ++ A +RL A N++N + G Sbjct: 1 MSSISAIAVSGLKAATRRLEVSASNVANQQSTG 33 >gi|86747894|ref|YP_484390.1| flagellar hook-associated protein [Rhodopseudomonas palustris HaA2] gi|86570922|gb|ABD05479.1| Flagellar hook-associated protein [Rhodopseudomonas palustris HaA2] Length = 588 Score = 35.6 bits (80), Expect = 5.9, Method: Composition-based stats. Identities = 9/28 (32%), Positives = 18/28 (64%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVGF 34 I + + +A + ++S + N+SN DT G+ Sbjct: 9 IAVGSLMASQVQISVASSNVSNADTTGY 36 >gi|1518046|gb|AAB62740.1| FlgK protein [Borrelia burgdorferi] Length = 616 Score = 35.6 bits (80), Expect = 5.9, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 19/46 (41%), Gaps = 3/46 (6%) Query: 1 MQT---SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSE 43 M + IG + A + ++TV N+SN G+ +V Sbjct: 1 MDSTFSGIEIGKRSLFAHKDAMNTVGHNLSNATKPGYSRQRVTMKT 46 >gi|2459711|gb|AAB71787.1| FlgB [Agrobacterium tumefaciens] Length = 134 Score = 35.6 bits (80), Expect = 6.0, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 17/40 (42%), Gaps = 1/40 (2%) Query: 15 LEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIKNDID 53 L R VA N++N +T F V F V+ A + Sbjct: 21 LSVRQEVVATNIANANTPKFHAKDVSPFEAVMQATSQQVG 60 >gi|159184364|ref|NP_353582.2| flagellar basal body rod protein FlgB [Agrobacterium tumefaciens str. C58] gi|159139678|gb|AAK86367.2| flagellar basal-body rod protein FlgB [Agrobacterium tumefaciens str. C58] Length = 130 Score = 35.6 bits (80), Expect = 6.0, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 17/40 (42%), Gaps = 1/40 (2%) Query: 15 LEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIKNDID 53 L R VA N++N +T F V F V+ A + Sbjct: 17 LSVRQEVVATNIANANTPKFHAKDVSPFEAVMQATSQQVG 56 >gi|209547925|ref|YP_002279842.1| flagellar basal body rod protein FlgB [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209533681|gb|ACI53616.1| flagellar basal-body rod protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 130 Score = 35.6 bits (80), Expect = 6.1, Method: Composition-based stats. Identities = 10/28 (35%), Positives = 14/28 (50%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVV 45 R VA N++N +T FR V + V Sbjct: 20 RQQVVAGNIANANTPKFRAKDVTPFDAV 47 >gi|190890360|ref|YP_001976902.1| flagellar basal-body rod protein [Rhizobium etli CIAT 652] gi|190695639|gb|ACE89724.1| flagellar basal-body rod protein [Rhizobium etli CIAT 652] Length = 130 Score = 35.6 bits (80), Expect = 6.1, Method: Composition-based stats. Identities = 10/28 (35%), Positives = 14/28 (50%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVV 45 R VA N++N +T FR V + V Sbjct: 20 RQQVVAGNIANANTPKFRAKDVTPFDAV 47 >gi|327193033|gb|EGE59945.1| flagellar basal-body rod protein [Rhizobium etli CNPAF512] Length = 130 Score = 35.6 bits (80), Expect = 6.2, Method: Composition-based stats. Identities = 10/28 (35%), Positives = 14/28 (50%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVV 45 R VA N++N +T FR V + V Sbjct: 20 RQQVVAGNIANANTPKFRAKDVTPFDAV 47 >gi|86356309|ref|YP_468201.1| flagellar basal body rod protein FlgB [Rhizobium etli CFN 42] gi|86280411|gb|ABC89474.1| flagellar basal-body rod protein [Rhizobium etli CFN 42] Length = 130 Score = 35.6 bits (80), Expect = 6.2, Method: Composition-based stats. Identities = 10/28 (35%), Positives = 14/28 (50%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVV 45 R VA N++N +T FR V + V Sbjct: 20 RQQVVAGNIANANTPKFRAKDVTPFDAV 47 >gi|32490787|ref|NP_871041.1| hypothetical protein WGLp038 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25165993|dbj|BAC24184.1| flgB [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 136 Score = 35.6 bits (80), Expect = 6.2, Method: Composition-based stats. Identities = 6/34 (17%), Positives = 18/34 (52%) Query: 17 QRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50 R + ++ N++N DT +++ + F +++ Sbjct: 21 NRQAIISSNIANADTPKYQSRDIDFKKLLKNFNE 54 >gi|126730122|ref|ZP_01745934.1| flagellar hook-associated protein K [Sagittula stellata E-37] gi|126709502|gb|EBA08556.1| flagellar hook-associated protein K [Sagittula stellata E-37] Length = 482 Score = 35.6 bits (80), Expect = 6.4, Method: Composition-based stats. Identities = 3/36 (8%), Positives = 15/36 (41%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 ++ E+ +++ + Q + + +I + + Sbjct: 446 VDTDQELQKLMQVEQYYTANAKVISTVDDLFERLLS 481 >gi|116250479|ref|YP_766317.1| flagellar basal body rod protein FlgB [Rhizobium leguminosarum bv. viciae 3841] gi|115255127|emb|CAK06201.1| putative flagellar basal-body rod protein [Rhizobium leguminosarum bv. viciae 3841] Length = 130 Score = 35.6 bits (80), Expect = 6.4, Method: Composition-based stats. Identities = 11/33 (33%), Positives = 15/33 (45%) Query: 18 RLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50 R VA N++N +T FR V + V N Sbjct: 20 RQQVVAGNIANANTPKFRAKDVTPFDAVLDNSN 52 >gi|269965642|ref|ZP_06179755.1| Flagellar basal-body rod protein C [Vibrio alginolyticus 40B] gi|269829710|gb|EEZ83946.1| Flagellar basal-body rod protein C [Vibrio alginolyticus 40B] Length = 138 Score = 35.6 bits (80), Expect = 6.5, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 34/96 (35%), Gaps = 6/96 (6%) Query: 10 AAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVVGAIKNDIDQKISFVASGK 63 +A A RL+TVA N++N D V ++ +K F+ V + + A + Sbjct: 12 SAMTAQTVRLNTVASNLANADAVSANPEDAYKALKPVFATVYQKTQMTTENGAYPNAEVR 71 Query: 64 EYLSKEVGSFISTGTELDFALEGDAWFALESPRGII 99 + E + L D + ++ Sbjct: 72 IVDVVKNAGDAEKRFEPNNPLANDEGYVFYPDIDVV 107 Score = 35.2 bits (79), Expect = 7.8, Method: Composition-based stats. Identities = 6/31 (19%), Positives = 16/31 (51%) Query: 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLI 227 G++ + + + EM M+ T+ F + ++ Sbjct: 97 GYVFYPDIDVVAEMADMMSATRSFETNVEVL 127 >gi|222147590|ref|YP_002548547.1| flagellar hook-associated protein FlgK [Agrobacterium vitis S4] gi|221734578|gb|ACM35541.1| flagellar-associated protein [Agrobacterium vitis S4] Length = 484 Score = 35.6 bits (80), Expect = 6.5, Method: Composition-based stats. Identities = 6/35 (17%), Positives = 18/35 (51%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 N E+ +M+ + Q + + T L++ ++ + + Sbjct: 447 VNLDEELSKMLDIEQSYKASTKLMNAVDEMLKSLL 481 Score = 34.8 bits (78), Expect = 9.8, Method: Composition-based stats. Identities = 5/39 (12%), Positives = 16/39 (41%), Gaps = 1/39 (2%) Query: 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGF-RTIKVK 40 ++ N + + ++ N++N+ T G+ + Sbjct: 5 STMNTATTSLGNSSTQSQVLSKNIANSQTEGYVKRDAAT 43 >gi|20141426|sp|Q44335|FLGB_AGRT5 RecName: Full=Flagellar basal-body rod protein flgB Length = 134 Score = 35.6 bits (80), Expect = 6.5, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 17/40 (42%), Gaps = 1/40 (2%) Query: 15 LEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIKNDID 53 L R VA N++N +T F V F V+ A + Sbjct: 21 LSVRQEVVATNIANANTPKFHAKDVSPFEAVMQATSQQVG 60 >gi|307721125|ref|YP_003892265.1| hypothetical protein Saut_1205 [Sulfurimonas autotrophica DSM 16294] gi|306979218|gb|ADN09253.1| protein of unknown function DUF1078 domain protein [Sulfurimonas autotrophica DSM 16294] Length = 101 Score = 35.6 bits (80), Expect = 6.6, Method: Composition-based stats. Identities = 9/26 (34%), Positives = 18/26 (69%) Query: 9 LAAQLALEQRLSTVADNMSNTDTVGF 34 +++ A + L+T A+N++N +T GF Sbjct: 7 ISSIGAHQTMLNTTANNVANVNTDGF 32 >gi|323490139|ref|ZP_08095359.1| flagellar basal body rod protein FlgB [Planococcus donghaensis MPA1U2] gi|323396187|gb|EGA89013.1| flagellar basal body rod protein FlgB [Planococcus donghaensis MPA1U2] Length = 133 Score = 35.6 bits (80), Expect = 6.8, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 20/43 (46%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDID 53 A A + + N++N DT +++ KV F + ++ + Sbjct: 14 ALSAATLKQRVHSANIANVDTANYKSKKVDFQAALNTAMSNQN 56 >gi|149173751|ref|ZP_01852380.1| probable flagellar hook-associated protein [Planctomyces maris DSM 8797] gi|148847281|gb|EDL61615.1| probable flagellar hook-associated protein [Planctomyces maris DSM 8797] Length = 558 Score = 35.6 bits (80), Expect = 6.9, Method: Composition-based stats. Identities = 5/38 (13%), Positives = 13/38 (34%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 S + E ++ + F S L+ ++ + Sbjct: 520 SGVSIDEETINVLTYQRAFQSAARLVSTIDELFTILLN 557 >gi|218659923|ref|ZP_03515853.1| flagellar basal body rod protein FlgB [Rhizobium etli IE4771] Length = 44 Score = 35.2 bits (79), Expect = 7.2, Method: Composition-based stats. Identities = 9/23 (39%), Positives = 12/23 (52%) Query: 18 RLSTVADNMSNTDTVGFRTIKVK 40 R VA N++N +T FR V Sbjct: 20 RQQVVAGNIANANTPKFRAKDVT 42 >gi|283834457|ref|ZP_06354198.1| flagellar basal-body rod protein FlgC [Citrobacter youngae ATCC 29220] gi|291070004|gb|EFE08113.1| flagellar basal-body rod protein FlgC [Citrobacter youngae ATCC 29220] Length = 143 Score = 35.2 bits (79), Expect = 7.2, Method: Composition-based stats. Identities = 10/89 (11%), Positives = 32/89 (35%), Gaps = 3/89 (3%) Query: 150 QKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYE 209 +I +++D + V+ P ++ + GF+ + N + + Sbjct: 53 YNNSLIGGHNRHAIDGASVQVQDVMQSGGAVKRYEPHHPMAD---QNGFVWYPDVNVVEQ 109 Query: 210 MGQMIHLTQKFNSITTLIDENEKSMLEAI 238 M M+ ++ F + +++ + + Sbjct: 110 MADMMSASRDFETDVDVLNNVKSMQQSLL 138 Score = 34.8 bits (78), Expect = 9.7, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 34/91 (37%), Gaps = 7/91 (7%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTV------GFRTIKVKFSEVV-GAIKNDIDQKISFV 59 I +A A RL+TVA NM+N ++ ++ F+ V ++ ++ Sbjct: 9 ISGSAMTAQTIRLNTVASNMANAESPASSEAQAYKARSPVFAAVYNNSLIGGHNRHAIDG 68 Query: 60 ASGKEYLSKEVGSFISTGTELDFALEGDAWF 90 AS + + G + + + + Sbjct: 69 ASVQVQDVMQSGGAVKRYEPHHPMADQNGFV 99 >gi|296124186|ref|YP_003631964.1| flagellar basal-body rod protein FlgB [Planctomyces limnophilus DSM 3776] gi|296016526|gb|ADG69765.1| flagellar basal-body rod protein FlgB [Planctomyces limnophilus DSM 3776] Length = 158 Score = 35.2 bits (79), Expect = 7.2, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 31/78 (39%) Query: 15 LEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFI 74 E R +A N++N DT G+R + ++ A+K + + + AS L+ Sbjct: 21 AELRQDVLAGNVANIDTPGYRMRDLPVADFQNALKKAYESQTAQPASLHPPLANPENPLT 80 Query: 75 STGTELDFALEGDAWFAL 92 + ++ +F Sbjct: 81 DLISPSATSVHTTNFFPE 98 >gi|153011527|ref|YP_001372741.1| flagellar basal body rod protein FlgB [Ochrobactrum anthropi ATCC 49188] gi|151563415|gb|ABS16912.1| flagellar basal-body rod protein FlgB [Ochrobactrum anthropi ATCC 49188] Length = 126 Score = 35.2 bits (79), Expect = 7.2, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%) Query: 15 LEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIK 49 L R +TVA N++N +T FR V+ F++V+ + Sbjct: 17 LSVRQATVAGNVANANTPDFRARDVQPFADVLDKTQ 52 >gi|153951648|ref|YP_001398444.1| flagellar basal body rod protein FlgB [Campylobacter jejuni subsp. doylei 269.97] gi|152939094|gb|ABS43835.1| flagellar basal-body rod protein FlgB [Campylobacter jejuni subsp. doylei 269.97] Length = 143 Score = 35.2 bits (79), Expect = 7.2, Method: Composition-based stats. Identities = 11/48 (22%), Positives = 21/48 (43%), Gaps = 2/48 (4%) Query: 5 FNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 G A L +L + N++N DT ++ ++F + N+I Sbjct: 10 LITGALAGRNLRNQL--INANLANVDTPFYKARDIEFETALVNRANEI 55 >gi|92116945|ref|YP_576674.1| flagellar basal body rod protein FlgB [Nitrobacter hamburgensis X14] gi|91799839|gb|ABE62214.1| flagellar basal body rod protein [Nitrobacter hamburgensis X14] Length = 135 Score = 35.2 bits (79), Expect = 7.3, Method: Composition-based stats. Identities = 12/81 (14%), Positives = 30/81 (37%), Gaps = 5/81 (6%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 ++ ++R +A+N++N+DT F+ ++V + S A+ Sbjct: 6 ISALAALRTRMQWHQERQRVLAENIANSDTPNFKP-----RDLVEPKFDAQGGNASGGAT 60 Query: 62 GKEYLSKEVGSFISTGTELDF 82 + + +G +F Sbjct: 61 LAMMRTTSGQTIAGSGPASNF 81 >gi|332162895|ref|YP_004299472.1| flagellar hook-associated protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325667125|gb|ADZ43769.1| Flagellar hook-associated protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 456 Score = 35.2 bits (79), Expect = 7.4, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 23/58 (39%), Gaps = 1/58 (1%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 I + A + LS A N+SN +T G+ + + VG N+ + V Sbjct: 6 IAQSGLQAAQAGLSAAAMNLSNANTPGYSRQRAE-QSAVGTTGNNAYSAGNGVNVDAF 62 >gi|170748653|ref|YP_001754913.1| flagellar basal body rod protein FlgB [Methylobacterium radiotolerans JCM 2831] gi|170655175|gb|ACB24230.1| flagellar basal body rod protein [Methylobacterium radiotolerans JCM 2831] Length = 133 Score = 35.2 bits (79), Expect = 7.5, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 27/81 (33%), Gaps = 3/81 (3%) Query: 10 AAQLALEQRLSTVADNMSNTDTVGFR-TIKVK--FSEVVGAIKNDIDQKISFVASGKEYL 66 + R +A+N++N D GF+ V+ F GA+ A Sbjct: 14 TRMQWAQARQGVIAENVANADMPGFKPRDLVEPRFDRATGALATTGSSLTLTSAGHMAPP 73 Query: 67 SKEVGSFISTGTELDFALEGD 87 + VG+ + G+ Sbjct: 74 GQSVGADSKRAKGFEIRPSGN 94 >gi|90408057|ref|ZP_01216228.1| putative polar flagellar FlgB [Psychromonas sp. CNPT3] gi|90310814|gb|EAS38928.1| putative polar flagellar FlgB [Psychromonas sp. CNPT3] Length = 133 Score = 35.2 bits (79), Expect = 7.6, Method: Composition-based stats. Identities = 9/65 (13%), Positives = 22/65 (33%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFIS 75 +R +A N++N DT ++ + F E + + ++ +S + Sbjct: 20 SRRAEILASNLTNADTPDYKARDLNFKEALLSARSGSGISLSRTNEIHRTGHSFSMQQSN 79 Query: 76 TGTEL 80 Sbjct: 80 QYYRT 84 >gi|85060038|ref|YP_455740.1| flagellar basal-body rod protein FlgB [Sodalis glossinidius str. 'morsitans'] gi|84780558|dbj|BAE75335.1| flagellar basal-body rod protein FlgB [Sodalis glossinidius str. 'morsitans'] Length = 130 Score = 35.2 bits (79), Expect = 7.6, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 21/58 (36%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSK 68 A QR S +A N+ N DT G++ + FS + +A + Sbjct: 8 ALNLRAQRQSIIAANIVNADTPGYQARDIDFSTELSKALTQGRASGETLALTTTSAAH 65 >gi|163844343|ref|YP_001621998.1| flagellar basal body rod protein FlgB [Brucella suis ATCC 23445] gi|163675066|gb|ABY39176.1| flagellar basal-body rod protein FlgB [Brucella suis ATCC 23445] Length = 126 Score = 35.2 bits (79), Expect = 7.6, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%) Query: 15 LEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIK 49 L R +TVA N++N +T FR V+ F++V+ + Sbjct: 17 LSVRQATVAGNVANANTPDFRARDVQPFADVLDKTQ 52 >gi|330863345|emb|CBX73468.1| hypothetical protein YEW_ES20630 [Yersinia enterocolitica W22703] Length = 298 Score = 35.2 bits (79), Expect = 7.7, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 23/58 (39%), Gaps = 1/58 (1%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 I + A + LS A N+SN +T G+ + + VG N+ + V Sbjct: 6 IAQSGLQAAQAGLSAAAMNLSNANTPGYSRQRAE-QSAVGTTGNNAYSAGNGVNVDAF 62 >gi|254720613|ref|ZP_05182424.1| flagellar basal body rod protein FlgB [Brucella sp. 83/13] gi|265985653|ref|ZP_06098388.1| flagellar basal-body rod protein FlgB [Brucella sp. 83/13] gi|306838575|ref|ZP_07471412.1| flagellar basal-body rod protein FlgB [Brucella sp. NF 2653] gi|306841052|ref|ZP_07473776.1| flagellar basal-body rod protein FlgB [Brucella sp. BO2] gi|264664245|gb|EEZ34506.1| flagellar basal-body rod protein FlgB [Brucella sp. 83/13] gi|306288941|gb|EFM60241.1| flagellar basal-body rod protein FlgB [Brucella sp. BO2] gi|306406361|gb|EFM62603.1| flagellar basal-body rod protein FlgB [Brucella sp. NF 2653] Length = 126 Score = 35.2 bits (79), Expect = 7.7, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%) Query: 15 LEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIK 49 L R +TVA N++N +T FR V+ F++V+ + Sbjct: 17 LSVRQATVAGNVANANTPDFRARDVQPFADVLDKTQ 52 >gi|306846281|ref|ZP_07478842.1| flagellar basal-body rod protein FlgB [Brucella sp. BO1] gi|306273276|gb|EFM55145.1| flagellar basal-body rod protein FlgB [Brucella sp. BO1] Length = 126 Score = 35.2 bits (79), Expect = 7.7, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%) Query: 15 LEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIK 49 L R +TVA N++N +T FR V+ F++V+ + Sbjct: 17 LSVRQATVAGNVANANTPDFRARDVQPFADVLDKTQ 52 >gi|285018722|ref|YP_003376433.1| hypothetical protein XALc_1955 [Xanthomonas albilineans GPE PC73] gi|283473940|emb|CBA16441.1| hypothetical protein XALc_1955 [Xanthomonas albilineans] Length = 102 Score = 35.2 bits (79), Expect = 7.7, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 12/26 (46%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRT 36 A L A+N++N T GF+ Sbjct: 14 GMRAAASGLQVRANNIANLATDGFQR 39 >gi|17989434|ref|NP_542067.1| flagellar basal body rod protein FlgB [Brucella melitensis bv. 1 str. 16M] gi|23499913|ref|NP_699353.1| flagellar basal body rod protein FlgB [Brucella suis 1330] gi|161620233|ref|YP_001594119.1| flagellar basal body rod protein FlgB [Brucella canis ATCC 23365] gi|225628622|ref|ZP_03786656.1| flagellar basal-body rod protein FlgB [Brucella ceti str. Cudo] gi|225686009|ref|YP_002733981.1| flagellar basal body rod protein FlgB [Brucella melitensis ATCC 23457] gi|254702573|ref|ZP_05164401.1| flagellar basal body rod protein FlgB [Brucella suis bv. 3 str. 686] gi|254706295|ref|ZP_05168123.1| flagellar basal body rod protein FlgB [Brucella pinnipedialis M163/99/10] gi|254711411|ref|ZP_05173222.1| flagellar basal body rod protein FlgB [Brucella pinnipedialis B2/94] gi|254712010|ref|ZP_05173821.1| flagellar basal body rod protein FlgB [Brucella ceti M644/93/1] gi|254715079|ref|ZP_05176890.1| flagellar basal body rod protein FlgB [Brucella ceti M13/05/1] gi|256014939|ref|YP_003104948.1| flagellar basal body rod protein [Brucella microti CCM 4915] gi|256029959|ref|ZP_05443573.1| flagellar basal body rod protein FlgB [Brucella pinnipedialis M292/94/1] gi|256043070|ref|ZP_05446014.1| flagellar basal body rod protein FlgB [Brucella melitensis bv. 1 str. Rev.1] gi|256059611|ref|ZP_05449809.1| flagellar basal body rod protein FlgB [Brucella neotomae 5K33] gi|256111946|ref|ZP_05452897.1| flagellar basal body rod protein FlgB [Brucella melitensis bv. 3 str. Ether] gi|256158121|ref|ZP_05456039.1| flagellar basal body rod protein FlgB [Brucella ceti M490/95/1] gi|256252925|ref|ZP_05458461.1| flagellar basal body rod protein FlgB [Brucella ceti B1/94] gi|256262868|ref|ZP_05465400.1| flagellar basal-body rod protein FlgB [Brucella melitensis bv. 2 str. 63/9] gi|260564300|ref|ZP_05834785.1| flagellar basal body rod protein FlgB [Brucella melitensis bv. 1 str. 16M] gi|261216789|ref|ZP_05931070.1| flagellar basal-body rod protein FlgB [Brucella ceti M13/05/1] gi|261220016|ref|ZP_05934297.1| flagellar basal-body rod protein FlgB [Brucella ceti B1/94] gi|261313739|ref|ZP_05952936.1| flagellar basal-body rod protein FlgB [Brucella pinnipedialis M163/99/10] gi|261319019|ref|ZP_05958216.1| flagellar basal-body rod protein FlgB [Brucella pinnipedialis B2/94] gi|261319656|ref|ZP_05958853.1| flagellar basal-body rod protein FlgB [Brucella ceti M644/93/1] gi|261323580|ref|ZP_05962777.1| flagellar basal-body rod protein FlgB [Brucella neotomae 5K33] gi|261753153|ref|ZP_05996862.1| flagellar basal-body rod protein FlgB [Brucella suis bv. 3 str. 686] gi|265986978|ref|ZP_06099535.1| flagellar basal-body rod protein FlgB [Brucella pinnipedialis M292/94/1] gi|265989508|ref|ZP_06102065.1| flagellar basal-body rod protein FlgB [Brucella melitensis bv. 1 str. Rev.1] gi|265993393|ref|ZP_06105950.1| flagellar basal-body rod protein FlgB [Brucella melitensis bv. 3 str. Ether] gi|265996638|ref|ZP_06109195.1| flagellar basal-body rod protein FlgB [Brucella ceti M490/95/1] gi|294853172|ref|ZP_06793844.1| flagellar basal-body rod protein FlgB [Brucella sp. NVSL 07-0026] gi|17985311|gb|AAL54331.1| flagellar basal-body rod protein flgb [Brucella melitensis bv. 1 str. 16M] gi|23463490|gb|AAN33358.1| flagellar basal-body rod protein FlgB [Brucella suis 1330] gi|161337044|gb|ABX63348.1| flagellar basal-body rod protein FlgB [Brucella canis ATCC 23365] gi|225616468|gb|EEH13516.1| flagellar basal-body rod protein FlgB [Brucella ceti str. Cudo] gi|225642114|gb|ACO02027.1| flagellar basal-body rod protein FlgB [Brucella melitensis ATCC 23457] gi|255997599|gb|ACU49286.1| flagellar basal body rod protein [Brucella microti CCM 4915] gi|260151943|gb|EEW87036.1| flagellar basal body rod protein FlgB [Brucella melitensis bv. 1 str. 16M] gi|260918600|gb|EEX85253.1| flagellar basal-body rod protein FlgB [Brucella ceti B1/94] gi|260921878|gb|EEX88446.1| flagellar basal-body rod protein FlgB [Brucella ceti M13/05/1] gi|261292346|gb|EEX95842.1| flagellar basal-body rod protein FlgB [Brucella ceti M644/93/1] gi|261298242|gb|EEY01739.1| flagellar basal-body rod protein FlgB [Brucella pinnipedialis B2/94] gi|261299560|gb|EEY03057.1| flagellar basal-body rod protein FlgB [Brucella neotomae 5K33] gi|261302765|gb|EEY06262.1| flagellar basal-body rod protein FlgB [Brucella pinnipedialis M163/99/10] gi|261742906|gb|EEY30832.1| flagellar basal-body rod protein FlgB [Brucella suis bv. 3 str. 686] gi|262550935|gb|EEZ07096.1| flagellar basal-body rod protein FlgB [Brucella ceti M490/95/1] gi|262764263|gb|EEZ10295.1| flagellar basal-body rod protein FlgB [Brucella melitensis bv. 3 str. Ether] gi|263000177|gb|EEZ12867.1| flagellar basal-body rod protein FlgB [Brucella melitensis bv. 1 str. Rev.1] gi|263092703|gb|EEZ16912.1| flagellar basal-body rod protein FlgB [Brucella melitensis bv. 2 str. 63/9] gi|264659175|gb|EEZ29436.1| flagellar basal-body rod protein FlgB [Brucella pinnipedialis M292/94/1] gi|294818827|gb|EFG35827.1| flagellar basal-body rod protein FlgB [Brucella sp. NVSL 07-0026] gi|326410332|gb|ADZ67396.1| flagellar basal body rod protein FlgB [Brucella melitensis M28] gi|326553624|gb|ADZ88263.1| flagellar basal body rod protein FlgB [Brucella melitensis M5-90] Length = 126 Score = 35.2 bits (79), Expect = 7.8, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%) Query: 15 LEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIK 49 L R +TVA N++N +T FR V+ F++V+ + Sbjct: 17 LSVRQATVAGNVANANTPDFRARDVQPFADVLDKTQ 52 >gi|318604259|emb|CBY25757.1| flagellar hook-associated protein FlgK [Yersinia enterocolitica subsp. palearctica Y11] Length = 456 Score = 35.2 bits (79), Expect = 7.9, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 23/58 (39%), Gaps = 1/58 (1%) Query: 7 IGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKE 64 I + A + LS A N+SN +T G+ + + VG N+ + V Sbjct: 6 IAQSGLQAAQAGLSAAAMNLSNANTPGYSRQRAE-QSAVGTTGNNAYSAGNGVNVDAF 62 >gi|114706768|ref|ZP_01439668.1| flagellar basal-body rod protein B [Fulvimarina pelagi HTCC2506] gi|114537716|gb|EAU40840.1| flagellar basal-body rod protein B [Fulvimarina pelagi HTCC2506] Length = 126 Score = 35.2 bits (79), Expect = 7.9, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 24/52 (46%), Gaps = 3/52 (5%) Query: 1 MQTSFNIGLAAQLA--LEQRLSTVADNMSNTDTVGFR-TIKVKFSEVVGAIK 49 M + L ++ A L R + VA+N++N +T G+ F +V+ Sbjct: 1 MDQVYLFSLTSKQADWLSHRQALVAENVANVNTPGYTAKDITPFEQVLDNTA 52 >gi|260568519|ref|ZP_05838988.1| flagellar basal-body rod protein FlgB [Brucella suis bv. 4 str. 40] gi|260155184|gb|EEW90265.1| flagellar basal-body rod protein FlgB [Brucella suis bv. 4 str. 40] Length = 126 Score = 35.2 bits (79), Expect = 8.1, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%) Query: 15 LEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIK 49 L R +TVA N++N +T FR V+ F++V+ + Sbjct: 17 LSVRQATVAGNVANANTPDFRARDVQPFADVLDKTQ 52 >gi|238927685|ref|ZP_04659445.1| flagellar hook-associated protein 1 [Selenomonas flueggei ATCC 43531] gi|238884401|gb|EEQ48039.1| flagellar hook-associated protein 1 [Selenomonas flueggei ATCC 43531] Length = 579 Score = 35.2 bits (79), Expect = 8.1, Method: Composition-based stats. Identities = 3/39 (7%), Positives = 15/39 (38%) Query: 204 ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 + E+ M+ + + + ++ ++ + I + Sbjct: 537 VDWNEELSNMLKFQTGYGACSRVLTSMDEILDRLINSTG 575 Score = 34.8 bits (78), Expect = 9.1, Method: Composition-based stats. Identities = 7/66 (10%), Positives = 18/66 (27%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 + L T N++N T G+ +V + + + + Sbjct: 4 GIQNNQLSLDTTGHNITNASTEGYSRQRVDSAATNYQERPSLYGGVYVGGGVDVVALNRA 63 Query: 71 GSFIST 76 + + Sbjct: 64 RNIYAD 69 >gi|148557912|ref|YP_001257210.1| flagellar basal body rod protein FlgB [Brucella ovis ATCC 25840] gi|148369197|gb|ABQ62069.1| flagellar basal-body rod protein FlgB [Brucella ovis ATCC 25840] Length = 126 Score = 35.2 bits (79), Expect = 8.2, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%) Query: 15 LEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIK 49 L R +TVA N++N +T FR V+ F++V+ + Sbjct: 17 LSVRQATVAGNVANANTPDFRARDVQPFADVLDKTQ 52 >gi|224417698|ref|ZP_03655704.1| flagellar basal body rod protein FlgB [Helicobacter canadensis MIT 98-5491] gi|253827047|ref|ZP_04869932.1| flagellar basal body rod protein [Helicobacter canadensis MIT 98-5491] gi|313141241|ref|ZP_07803434.1| flagellar basal body rod protein FlgB [Helicobacter canadensis MIT 98-5491] gi|253510453|gb|EES89112.1| flagellar basal body rod protein [Helicobacter canadensis MIT 98-5491] gi|313130272|gb|EFR47889.1| flagellar basal body rod protein FlgB [Helicobacter canadensis MIT 98-5491] Length = 144 Score = 35.2 bits (79), Expect = 8.3, Method: Composition-based stats. Identities = 8/37 (21%), Positives = 18/37 (48%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 R +A N++N T +R + F +++ ++I Sbjct: 21 SLRRDMIAGNIANVSTPMYRPKDINFEQMMANKADEI 57 >gi|75675325|ref|YP_317746.1| flagellar basal body rod protein FlgB [Nitrobacter winogradskyi Nb-255] gi|74420195|gb|ABA04394.1| Flagellar basal body rod protein [Nitrobacter winogradskyi Nb-255] Length = 135 Score = 35.2 bits (79), Expect = 8.4, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 31/93 (33%), Gaps = 5/93 (5%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 ++ ++R +A+N++N+DT FR ++V + S + Sbjct: 6 ISALAALRTRMQWHQERQRVLAENIANSDTPNFRP-----HDLVEPTFDAQGGNASSGVT 60 Query: 62 GKEYLSKEVGSFISTGTELDFALEGDAWFALES 94 + S +G F G+ F Sbjct: 61 LAMTRTTAGQSMAGSGASAHFGQNGNGGFQTRP 93 >gi|238752869|ref|ZP_04614334.1| Flagellar basal-body rod protein FlgB [Yersinia rohdei ATCC 43380] gi|238708908|gb|EEQ01161.1| Flagellar basal-body rod protein FlgB [Yersinia rohdei ATCC 43380] Length = 116 Score = 35.2 bits (79), Expect = 8.4, Method: Composition-based stats. Identities = 12/79 (15%), Positives = 25/79 (31%), Gaps = 6/79 (7%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 Q + + AA R ++ N++N +T F+ + F+ + K V Sbjct: 6 QKALGVHPAAMQLRLTRAELLSANLANVNTPNFQAKDIDFAAEMQRAKRG------GVGM 59 Query: 62 GKEYLSKEVGSFISTGTEL 80 + + S Sbjct: 60 TSPQMKYRLPYQPSQDGNT 78 >gi|119947180|ref|YP_944860.1| flagellar basal-body rod protein FlgB [Psychromonas ingrahamii 37] gi|119865784|gb|ABM05261.1| flagellar basal-body rod protein FlgB [Psychromonas ingrahamii 37] Length = 117 Score = 35.2 bits (79), Expect = 8.6, Method: Composition-based stats. Identities = 15/86 (17%), Positives = 32/86 (37%), Gaps = 4/86 (4%) Query: 15 LEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFI 74 QR +A+N++N+DT ++ + A N I+ + + + KE + Sbjct: 19 HTQRTQILANNLANSDTPNYKAQDLT----YSATMNKINARDTQLNLSKEIFFRIPFQRS 74 Query: 75 STGTELDFALEGDAWFALESPRGIIL 100 G ++ +E + L Sbjct: 75 ENGNTVELGIEQAKFAENNLNYQTSL 100 >gi|332162904|ref|YP_004299481.1| flagellar basal-body rod protein FlgB [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318604249|emb|CBY25747.1| flagellar basal-body rod protein FlgB [Yersinia enterocolitica subsp. palearctica Y11] gi|325667134|gb|ADZ43778.1| Flagellar basal-body rod protein FlgB [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330863354|emb|CBX73477.1| hypothetical protein YEW_ES20720 [Yersinia enterocolitica W22703] Length = 116 Score = 35.2 bits (79), Expect = 8.7, Method: Composition-based stats. Identities = 12/79 (15%), Positives = 24/79 (30%), Gaps = 6/79 (7%) Query: 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVAS 61 Q + + AA R ++ N++N +T F+ + F + K V Sbjct: 6 QKALGVHPAAMQLRLTRAELLSANLANVNTPNFQAKDIDFGAEMQRAKRG------GVGM 59 Query: 62 GKEYLSKEVGSFISTGTEL 80 + + S Sbjct: 60 TSPQMKYRLPYQPSQDGNT 78 >gi|316931494|ref|YP_004106476.1| hypothetical protein Rpdx1_0099 [Rhodopseudomonas palustris DX-1] gi|315599208|gb|ADU41743.1| protein of unknown function DUF1078 domain protein [Rhodopseudomonas palustris DX-1] Length = 136 Score = 35.2 bits (79), Expect = 8.7, Method: Composition-based stats. Identities = 9/33 (27%), Positives = 16/33 (48%) Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVG 33 M +I ++ A +RL A N++N + G Sbjct: 1 MSAIASIAVSGLNAATRRLEVSASNIANQRSTG 33 >gi|227820855|ref|YP_002824825.1| flagellar basal body rod protein FlgB [Sinorhizobium fredii NGR234] gi|227339854|gb|ACP24072.1| putative flagellar basal-body rod protein FlgB [Sinorhizobium fredii NGR234] Length = 126 Score = 35.2 bits (79), Expect = 8.7, Method: Composition-based stats. Identities = 10/33 (30%), Positives = 17/33 (51%), Gaps = 1/33 (3%) Query: 18 RLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIK 49 R + VA N++N +T +R V+ F V+ Sbjct: 20 RQNVVAGNIANANTPHYRAKDVQPFESVLQNTG 52 >gi|254699458|ref|ZP_05161286.1| flagellar basal body rod protein FlgB [Brucella suis bv. 5 str. 513] gi|261749909|ref|ZP_05993618.1| flagellar basal-body rod protein FlgB [Brucella suis bv. 5 str. 513] gi|261739662|gb|EEY27588.1| flagellar basal-body rod protein FlgB [Brucella suis bv. 5 str. 513] Length = 126 Score = 35.2 bits (79), Expect = 8.9, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%) Query: 15 LEQRLSTVADNMSNTDTVGFRTIKVK-FSEVVGAIK 49 L R +TVA N++N +T FR V+ F++V+ + Sbjct: 17 LSVRQATVAGNVANANTPDFRARDVQPFADVLDKTQ 52 >gi|254503455|ref|ZP_05115606.1| hypothetical protein SADFL11_3494 [Labrenzia alexandrii DFL-11] gi|222439526|gb|EEE46205.1| hypothetical protein SADFL11_3494 [Labrenzia alexandrii DFL-11] Length = 129 Score = 34.8 bits (78), Expect = 9.3, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 31/87 (35%), Gaps = 4/87 (4%) Query: 5 FNIGL-AAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKNDIDQKISFVA 60 L + + R +A+N++N+D+ F V F + +G + + + VA Sbjct: 3 LFQALKSKMQWHQTRQGVLAENIANSDSPEFEARDVKAYSFDDHIGREAFGLTTERTSVA 62 Query: 61 SGKEYLSKEVGSFISTGTELDFALEGD 87 + +G + G+ Sbjct: 63 HISGMIGSGIGGKAERRDSFEITPSGN 89 >gi|328947991|ref|YP_004365328.1| flagellar basal-body rod protein FlgB [Treponema succinifaciens DSM 2489] gi|328448315|gb|AEB14031.1| flagellar basal-body rod protein FlgB [Treponema succinifaciens DSM 2489] Length = 139 Score = 34.8 bits (78), Expect = 9.6, Method: Composition-based stats. Identities = 10/72 (13%), Positives = 21/72 (29%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEV 70 A R A+N++N++ F+ V F + D + S Sbjct: 14 ALDVESLRYQVTANNIANSEVANFKRQSVNFESELKKAFVSRDNEHSSFRMATNDARHIQ 73 Query: 71 GSFISTGTELDF 82 +++ Sbjct: 74 SEVPRDWRDVEP 85 >gi|222824064|ref|YP_002575638.1| flagellar proximal rod protein FlgB [Campylobacter lari RM2100] gi|222539286|gb|ACM64387.1| flagellar proximal rod protein FlgB [Campylobacter lari RM2100] Length = 143 Score = 34.8 bits (78), Expect = 9.7, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 18/42 (42%) Query: 11 AQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDI 52 A R + N++N DT ++ ++F + N+I Sbjct: 14 ALAGRNLRSQMINSNLANVDTPFYKARDIEFETALVNRANEI 55 >gi|295189279|gb|ADF83466.1| putative head protein [Lactobacillus phage LBR48] Length = 367 Score = 34.8 bits (78), Expect = 9.9, Method: Composition-based stats. Identities = 9/37 (24%), Positives = 15/37 (40%) Query: 202 SNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAI 238 SN +M MI Q F + +ID + + + Sbjct: 178 SNIQGGTKMATMIIDNQSFEADQRVIDAANDTKKQLV 214 >gi|197335280|ref|YP_002156703.1| flagellar basal-body rod protein FlgB [Vibrio fischeri MJ11] gi|197316770|gb|ACH66217.1| flagellar basal-body rod protein FlgB [Vibrio fischeri MJ11] Length = 131 Score = 34.8 bits (78), Expect = 9.9, Method: Composition-based stats. Identities = 6/35 (17%), Positives = 18/35 (51%) Query: 16 EQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKN 50 +R +A N++ +T G++ + F + + + + Sbjct: 20 SERAEMLATNIAQANTPGYKAKGMDFQKALQSATS 54 >gi|239834426|ref|ZP_04682754.1| flagellar hook-associated protein FlgK [Ochrobactrum intermedium LMG 3301] gi|239822489|gb|EEQ94058.1| flagellar hook-associated protein FlgK [Ochrobactrum intermedium LMG 3301] Length = 484 Score = 34.8 bits (78), Expect = 10.0, Method: Composition-based stats. Identities = 5/43 (11%), Positives = 17/43 (39%), Gaps = 3/43 (6%) Query: 202 SN---ANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 SN + EM ++ L + + + ++ + + + + Sbjct: 442 SNANGVDMDTEMALLLDLEHSYQASSRVLTTISAMLDDLLNAV 484 Database: nr Posted date: May 22, 2011 12:22 AM Number of letters in database: 999,999,966 Number of sequences in database: 2,987,313 Database: /data/usr2/db/fasta/nr.01 Posted date: May 22, 2011 12:30 AM Number of letters in database: 999,999,796 Number of sequences in database: 2,903,041 Database: /data/usr2/db/fasta/nr.02 Posted date: May 22, 2011 12:36 AM Number of letters in database: 999,999,281 Number of sequences in database: 2,904,016 Database: /data/usr2/db/fasta/nr.03 Posted date: May 22, 2011 12:41 AM Number of letters in database: 999,999,960 Number of sequences in database: 2,935,328 Database: /data/usr2/db/fasta/nr.04 Posted date: May 22, 2011 12:46 AM Number of letters in database: 842,794,627 Number of sequences in database: 2,394,679 Lambda K H 0.310 0.117 0.347 Lambda K H 0.267 0.0358 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,661,955,673 Number of Sequences: 14124377 Number of extensions: 70364139 Number of successful extensions: 145519 Number of sequences better than 10.0: 6934 Number of HSP's better than 10.0 without gapping: 6782 Number of HSP's successfully gapped in prelim test: 152 Number of HSP's that attempted gapping in prelim test: 131594 Number of HSP's gapped (non-prelim): 10896 length of query: 243 length of database: 4,842,793,630 effective HSP length: 135 effective length of query: 108 effective length of database: 2,936,002,735 effective search space: 317088295380 effective search space used: 317088295380 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 79 (35.2 bits)